BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9403
(737 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|398834868|ref|ZP_10592268.1| putative Zn-dependent protease-like protein [Herbaspirillum sp.
YR522]
gi|398219947|gb|EJN06410.1| putative Zn-dependent protease-like protein [Herbaspirillum sp.
YR522]
Length = 486
Score = 733 bits (1891), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/481 (69%), Positives = 411/481 (85%)
Query: 256 QKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVK 315
+ N+ L +AR +LL PF LDE LLK LG+MF +KVDYAD YFQFTK+E W LEEGIVK
Sbjct: 5 EPNMGALQVARDVLLTPFGLDESGLLKALGSMFTHKVDYADLYFQFTKSEGWSLEEGIVK 64
Query: 316 TGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKI 375
TG+FSI+QGVGVRA+SGDKTAF YSD+IS+ L+ A +TRSIA Q G++K+ +
Sbjct: 65 TGSFSIDQGVGVRAVSGDKTAFSYSDEISERALMEAAAATRSIARQGAGRVKVAGTMIPA 124
Query: 376 KINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGL 435
+LY D ++S++ K+KLLERVE+IAR KDPRV++V+A+LSGEYDV+L+ R DG+
Sbjct: 125 GSRALYLPHDPLNSLDATAKVKLLERVERIARAKDPRVVQVMASLSGEYDVVLVARADGV 184
Query: 436 IVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLE 495
+ ADIRPLV++ VT+I E+NGRRE+G+SG GGRYNY YFTD +LE+ S +V++AL+NL+
Sbjct: 185 LAADIRPLVRVSVTVIAEQNGRREVGSSGGGGRYNYAYFTDDLLEQYASEAVSTALVNLD 244
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
++PAPAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSS FS IG+R+A+K +T+VD+
Sbjct: 245 SRPAPAGPMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSTFSGRIGERVAAKGVTVVDD 304
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+A+RRGS+N+DDEGN TQCTTLIE+GILKGYMQD MNARLM M +TGNARRESFAH+P
Sbjct: 305 GTIADRRGSLNVDDEGNATQCTTLIEDGILKGYMQDTMNARLMKMPVTGNARRESFAHLP 364
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G HPEEI++SVKNGLYA NF GGQVDITNGKFVFSAS+AY+I++G+IT
Sbjct: 365 MPRMTNTYMLAGDRHPEEILASVKNGLYAVNFGGGQVDITNGKFVFSASEAYMIEDGRIT 424
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
YPVKGATLIG+GP++L +VSMIGNDM+LD GVGVCGK+GQ VPVGVGQPTL+ID +TVGG
Sbjct: 425 YPVKGATLIGNGPDVLNRVSMIGNDMRLDSGVGVCGKEGQSVPVGVGQPTLRIDGVTVGG 484
Query: 736 T 736
T
Sbjct: 485 T 485
>gi|134094101|ref|YP_001099176.1| microcin B17 maturation protein [Herminiimonas arsenicoxydans]
gi|133738004|emb|CAL61049.1| Protein tldD homolog [Herminiimonas arsenicoxydans]
Length = 486
Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/481 (69%), Positives = 413/481 (85%)
Query: 256 QKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVK 315
+ N+ L +AR +LL PF LDE +L+K LG MF ++VDYAD YFQFTK+E W LEEGIVK
Sbjct: 5 EPNLQTLAVARDVLLTPFGLDESVLIKTLGTMFTHRVDYADLYFQFTKSEGWSLEEGIVK 64
Query: 316 TGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKI 375
TG+FSI+QGVGVRA+SGDKTAF YSD+IS+ L+ A +TR+IA Q GKIK+ I+++
Sbjct: 65 TGSFSIDQGVGVRAVSGDKTAFSYSDEISERALMEAAIATRTIARQGAGKIKVASAIQQV 124
Query: 376 KINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGL 435
LY D ++S++ EK+KLLE++E+IAR KDPRV++V+A L+GEYDV+L+ R+DG+
Sbjct: 125 GGRDLYLPNDPLTSLDATEKVKLLEKIERIARAKDPRVVQVMAGLAGEYDVVLVVRSDGV 184
Query: 436 IVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLE 495
+ ADIRPLV++ +T+I E+NGRRE+G+SG GGRY+Y YF+D +LEK S +V SAL+NLE
Sbjct: 185 LAADIRPLVRVSITVIAEQNGRREMGSSGGGGRYSYAYFSDELLEKYASEAVASALVNLE 244
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A+PAPAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAFS IG+R+A+K +T+VD+
Sbjct: 245 ARPAPAGPMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFSGRIGERVAAKGVTVVDD 304
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+A+RRGS+NIDDEGNPTQCTTLIE+GILKGY+QD MNARLMNM +TGNARRESFAH+P
Sbjct: 305 GTIADRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDTMNARLMNMPVTGNARRESFAHLP 364
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G P EI++SVKNGLYA NF GGQVDITNGKFVFSAS+AY+I+NGK+T
Sbjct: 365 MPRMTNTYMLGGDKDPAEILASVKNGLYAVNFGGGQVDITNGKFVFSASEAYMIENGKVT 424
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
YPVKGATLIG+GP++L +VSMIGNDM LD GVGVCGK+GQ VPVGVGQPTL+ID +TVGG
Sbjct: 425 YPVKGATLIGNGPDVLNRVSMIGNDMSLDSGVGVCGKEGQSVPVGVGQPTLRIDGVTVGG 484
Query: 736 T 736
T
Sbjct: 485 T 485
>gi|152981200|ref|YP_001352527.1| TldD protein [Janthinobacterium sp. Marseille]
gi|151281277|gb|ABR89687.1| TldD protein [Janthinobacterium sp. Marseille]
Length = 486
Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/481 (69%), Positives = 411/481 (85%)
Query: 256 QKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVK 315
+ N+ L +AR +LL PF LDE IL+K LG MF ++VDYAD YFQFTK+E W LEEGIVK
Sbjct: 5 EPNLKTLAVARDVLLTPFGLDESILIKTLGTMFTHRVDYADLYFQFTKSEGWSLEEGIVK 64
Query: 316 TGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKI 375
TG+FSI+QGVGVRA+SGDKTAF YSD+IS+ L+ A +TR+IA Q GK+K+ I+
Sbjct: 65 TGSFSIDQGVGVRAVSGDKTAFSYSDEISERALLEAALATRTIARQGAGKVKVASAIQAG 124
Query: 376 KINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGL 435
SLY D ++S++ EK+KLLE++E+IAR KDPRV++V+A L+GEYDV+L+ R+DG+
Sbjct: 125 GGRSLYLPHDPLTSLDATEKVKLLEKIERIARAKDPRVVQVMAGLAGEYDVVLVVRSDGV 184
Query: 436 IVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLE 495
+ ADIRPLV++ +T+I E+NGRRE+G+SG GGRY+Y YF D +LEK S +V SAL+NLE
Sbjct: 185 LAADIRPLVRVSITVIAEQNGRREMGSSGGGGRYSYAYFDDELLEKYASEAVASALVNLE 244
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A+PAPAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAFS IG+R+A+K +T+VD+
Sbjct: 245 ARPAPAGPMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFSGRIGERVAAKGVTVVDD 304
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+A+RRGS+NIDDEGNPTQCTTLIE+GILKGY+QD MNARLM M +TGNARRESFAH+P
Sbjct: 305 GTIADRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDTMNARLMKMPVTGNARRESFAHLP 364
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G P EI++SVKNGLYA NF GGQVDITNGKFVFSAS+AY+I++GK+T
Sbjct: 365 MPRMTNTYMLGGDKDPAEILASVKNGLYAVNFGGGQVDITNGKFVFSASEAYMIEDGKVT 424
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
YPVKGATLIG+GP++L +VSMIGNDM+LD GVGVCGK+GQ VPVGVGQPTL+ID +TVGG
Sbjct: 425 YPVKGATLIGNGPDVLNRVSMIGNDMRLDSGVGVCGKEGQSVPVGVGQPTLRIDGVTVGG 484
Query: 736 T 736
T
Sbjct: 485 T 485
>gi|427402906|ref|ZP_18893903.1| hypothetical protein HMPREF9710_03499 [Massilia timonae CCUG 45783]
gi|425718712|gb|EKU81659.1| hypothetical protein HMPREF9710_03499 [Massilia timonae CCUG 45783]
Length = 486
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/481 (66%), Positives = 406/481 (84%)
Query: 256 QKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVK 315
+ N+ + +AR +LL PF LDE LL+ LG MF +KVDYAD YFQFTK+E W LEEGIVK
Sbjct: 5 EPNLSSIAVARDVLLTPFGLDEGKLLRALGTMFTHKVDYADLYFQFTKSEGWSLEEGIVK 64
Query: 316 TGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKI 375
TG+FSI+QGVGVRAISGDKTAF YSD+IS+ L++A +TR+IA G+IK+ +
Sbjct: 65 TGSFSIDQGVGVRAISGDKTAFSYSDEISERALLDAATATRTIARAGAGRIKVAGSALPT 124
Query: 376 KINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGL 435
SLY D ++S++ K+KLLERVEK+AR KDPRV++V+A L+GEYDV+L+ R+DG+
Sbjct: 125 GGRSLYLPNDPLASLDATAKVKLLERVEKMARAKDPRVVQVMAGLAGEYDVVLVVRSDGV 184
Query: 436 IVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLE 495
+ ADIRPLV++ VT+I E+NGRRE+G+SG GGR++Y YF D +L++ + +V SA +NLE
Sbjct: 185 LAADIRPLVRVSVTVIAEQNGRREVGSSGGGGRFDYGYFDDEVLDRYATEAVKSACVNLE 244
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A+PAPAG M +VLGPGWPG+LLHEA+GHGLEGDFNRKGSS+++ IG+R+A+K +T+VD+
Sbjct: 245 ARPAPAGPMTIVLGPGWPGVLLHEAVGHGLEGDFNRKGSSSYAGMIGQRVAAKGVTVVDD 304
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTL +RRGS+NIDDEGNPTQCTTLIE+GILKGY+QD MNARLM M +TGNARRESFAH+P
Sbjct: 305 GTLQDRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDTMNARLMKMPVTGNARRESFAHLP 364
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYM G P+EI++SVKNGLYA NF GGQVDITNGKFVFSAS+AY+I++GKIT
Sbjct: 365 MPRMTNTYMRAGDKDPQEILASVKNGLYAVNFGGGQVDITNGKFVFSASEAYMIEDGKIT 424
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
YPVKGATLIG+GP+++ ++SMIGNDM+LD GVGVCGK+GQ VPVGVGQPTL+ID +TVGG
Sbjct: 425 YPVKGATLIGNGPDVMNRISMIGNDMRLDSGVGVCGKEGQSVPVGVGQPTLRIDGVTVGG 484
Query: 736 T 736
T
Sbjct: 485 T 485
>gi|445495209|ref|ZP_21462253.1| protein TldD [Janthinobacterium sp. HH01]
gi|444791370|gb|ELX12917.1| protein TldD [Janthinobacterium sp. HH01]
Length = 486
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/481 (69%), Positives = 412/481 (85%)
Query: 256 QKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVK 315
+ N+ L +AR ILL PF LDE LLK LG+MF +KVDYAD YFQFTKNE W LEEGIVK
Sbjct: 5 EPNLSTLAVARDILLTPFGLDEAKLLKTLGSMFTHKVDYADLYFQFTKNEGWSLEEGIVK 64
Query: 316 TGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKI 375
TG+FSI+QGVGVRA+SGDKTAF YSDDIS+ L++A +TR+IA GKIK+ +
Sbjct: 65 TGSFSIDQGVGVRAVSGDKTAFAYSDDISEAALMDAASATRTIARAGAGKIKVASAMTPS 124
Query: 376 KINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGL 435
SLY D + S++ K+KLLER+EK+AR KDPRV++V+A+L+GEYDV+L+ R+DG+
Sbjct: 125 GGRSLYLPHDPLVSLDATAKVKLLERIEKMARAKDPRVVQVMASLAGEYDVVLVVRSDGV 184
Query: 436 IVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLE 495
+ ADIRPLV++ +T+IVE+NGRRE+G+SG GGRY+Y YF+D +LE+ +++VNSA++NL+
Sbjct: 185 LAADIRPLVRVSLTVIVEQNGRREMGSSGGGGRYDYGYFSDTLLEQYATDAVNSAVVNLD 244
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A+PAPAG M VVLGPGWPGILLHEAIGHGLEGDFNRKGSS FS IG+R+A+K +T+VD+
Sbjct: 245 ARPAPAGPMTVVLGPGWPGILLHEAIGHGLEGDFNRKGSSTFSGMIGERVAAKGVTVVDD 304
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTLA+RRGS+NIDDEGNPTQCTTLIE+GILKGY+QD MNARLM M +TGNARRESFAH+P
Sbjct: 305 GTLADRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDTMNARLMKMPVTGNARRESFAHLP 364
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G P EI++SVKNGLYA NF GGQVDITNGKFVFSAS+AY+I++GK+T
Sbjct: 365 MPRMTNTYMLGGDKDPAEILASVKNGLYAVNFGGGQVDITNGKFVFSASEAYMIEDGKVT 424
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
YPVKGATLIG+GP +L +VSMIGNDM+LDPGVGVCGK+GQ VPVGVGQPTL+ID +TVGG
Sbjct: 425 YPVKGATLIGNGPEVLNRVSMIGNDMRLDPGVGVCGKEGQSVPVGVGQPTLRIDGVTVGG 484
Query: 736 T 736
T
Sbjct: 485 T 485
>gi|399019623|ref|ZP_10721769.1| putative Zn-dependent protease-like protein [Herbaspirillum sp.
CF444]
gi|398097514|gb|EJL87818.1| putative Zn-dependent protease-like protein [Herbaspirillum sp.
CF444]
Length = 486
Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/481 (69%), Positives = 411/481 (85%)
Query: 256 QKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVK 315
+ N+ L IAR +LL PF LDE LLK LG MF +KVDYAD YFQFTK+E W LEEGIVK
Sbjct: 5 EPNLSALGIARDVLLTPFGLDEAKLLKTLGTMFTHKVDYADLYFQFTKSEGWSLEEGIVK 64
Query: 316 TGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKI 375
TG+FSI+QGVGVRA+SGDKTAF YSD+IS+ L++A +TR+I Q G++KI +++
Sbjct: 65 TGSFSIDQGVGVRAVSGDKTAFSYSDEISEAILLDAAAATRTIGRQGAGRVKIAGSMQPN 124
Query: 376 KINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGL 435
SLY D ++S++ K+ LLER+E+IAR KDPRV++V+A+L+GEYDV+L+ R+DG+
Sbjct: 125 GGRSLYLPHDPLTSLDATAKVNLLERIERIARAKDPRVVQVMASLAGEYDVVLVARSDGI 184
Query: 436 IVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLE 495
I ADIRPLV++ +T+I E+NGRRE+G+SG GGRY+Y YF+D +LEK S +V++AL+NLE
Sbjct: 185 IAADIRPLVRVSITVIAEQNGRREMGSSGGGGRYSYAYFSDELLEKYASEAVSTALVNLE 244
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A+PAPAG M VVLGPGWPGILLHEAIGHGLEGDFNRKGSS FS IG+R+A+K +T+VD+
Sbjct: 245 ARPAPAGPMTVVLGPGWPGILLHEAIGHGLEGDFNRKGSSTFSGRIGERVAAKGVTVVDD 304
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+A+RRGS+NIDDEGNPTQCTTLIE+GILKGY+QD MNARLM M +TGNARRESFAH+P
Sbjct: 305 GTIADRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDTMNARLMKMPVTGNARRESFAHLP 364
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G P EI++SVKNGLYA NF GGQVDITNGKFVFSAS+AY+I+NGKI+
Sbjct: 365 MPRMTNTYMLAGDKDPAEILASVKNGLYAVNFGGGQVDITNGKFVFSASEAYMIENGKIS 424
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
YPVKGATLIG+GP++L +VS+IGNDMKLD GVGVCGK+GQ VPVGVGQPTL++D +TVGG
Sbjct: 425 YPVKGATLIGNGPDVLNRVSLIGNDMKLDSGVGVCGKEGQSVPVGVGQPTLRLDGVTVGG 484
Query: 736 T 736
T
Sbjct: 485 T 485
>gi|340788432|ref|YP_004753897.1| TldD protein, probably a protease [Collimonas fungivorans Ter331]
gi|340553699|gb|AEK63074.1| TldD protein, probably a protease [Collimonas fungivorans Ter331]
Length = 486
Score = 706 bits (1823), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/481 (70%), Positives = 412/481 (85%)
Query: 256 QKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVK 315
+ N+ L IAR ILL PF LDE LLK LG MF +KVDYAD YFQFTK+E W LEEGIVK
Sbjct: 5 EPNLGTLAIARDILLTPFGLDESSLLKALGTMFTHKVDYADLYFQFTKSEGWSLEEGIVK 64
Query: 316 TGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKI 375
TG+FSI+QGVGVRAISGDKTAF YSD+IS+ L +A +TR+IA Q GKIKI +++
Sbjct: 65 TGSFSIDQGVGVRAISGDKTAFSYSDEISERALHDAAVATRTIARQGAGKIKIAAGMQQS 124
Query: 376 KINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGL 435
SLY D + S++ EK+KLLERVE++AR KDPRV++V+A L+ EYDV+L+ R+DG+
Sbjct: 125 GGRSLYLPNDPLVSLDATEKVKLLERVERLARAKDPRVVQVMAGLAAEYDVVLVARSDGV 184
Query: 436 IVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLE 495
I ADIRPLV+L VT+IVE+NGRRE G+SG GGRY+Y+YF+D +LE+ +++V SAL+NL+
Sbjct: 185 IAADIRPLVRLSVTVIVEQNGRRETGSSGGGGRYSYSYFSDALLEQYAADAVASALVNLD 244
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A+PAPAG M VVLGPGWPGILLHEAIGHGLEGDFNRKGSS FS IG+R+A+K +T+VD+
Sbjct: 245 ARPAPAGPMTVVLGPGWPGILLHEAIGHGLEGDFNRKGSSTFSGRIGERVAAKGVTVVDD 304
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+A+RRGS+NIDDEGNP+QCTTLIE+GILKGY+QD MNARLM M +TGNARRESFAH+P
Sbjct: 305 GTIADRRGSLNIDDEGNPSQCTTLIEDGILKGYIQDTMNARLMKMPVTGNARRESFAHLP 364
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G P EI++SVKNGLYA NF GGQVDITNGKFVFSAS+AY+I+NGK+T
Sbjct: 365 MPRMTNTYMLAGDKDPAEILASVKNGLYAVNFGGGQVDITNGKFVFSASEAYMIENGKVT 424
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
YPVKGATLIG+GP++L +VSMIGNDMKLDPGVGVCGK+GQ VPVGVGQPTL+ID +TVGG
Sbjct: 425 YPVKGATLIGNGPDVLNRVSMIGNDMKLDPGVGVCGKEGQSVPVGVGQPTLRIDGVTVGG 484
Query: 736 T 736
T
Sbjct: 485 T 485
>gi|409405224|ref|ZP_11253686.1| Zn-dependent protease [Herbaspirillum sp. GW103]
gi|386433773|gb|EIJ46598.1| Zn-dependent protease [Herbaspirillum sp. GW103]
Length = 486
Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/481 (68%), Positives = 411/481 (85%)
Query: 256 QKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVK 315
+ N+ L +AR +LL PF LDE LLK LG+MF +KVDYAD YFQFTK+E W LEEGIVK
Sbjct: 5 EPNMGALQVARDLLLTPFGLDESKLLKALGSMFTHKVDYADLYFQFTKSEGWSLEEGIVK 64
Query: 316 TGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKI 375
TG+FSI+QGVGVRA+SGDKTAF YSD+IS++ L++A +TR+IA Q +GKIK+ +
Sbjct: 65 TGSFSIDQGVGVRAVSGDKTAFSYSDEISESALLDAAAATRTIARQGSGKIKVAGAMTPA 124
Query: 376 KINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGL 435
+LY D ++S++ K++LLER+E+IAR KDPRV +V+A+LSGEYDV+L+ R DG+
Sbjct: 125 GGRALYLPHDPLTSLDATAKVQLLERIERIARAKDPRVKQVMASLSGEYDVVLVARADGV 184
Query: 436 IVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLE 495
+ ADIRPLV++ VT+I E+NGRRE+G+SG GGRY+Y YF++ +LEK S +V +AL+NL+
Sbjct: 185 LAADIRPLVRVSVTVIAEQNGRREMGSSGGGGRYDYGYFSETLLEKYASEAVATALVNLD 244
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A+PAPAG M VVLGPGWPGILLHEAIGHGLEGDFNRKGSS FS IG+R+A+K +T+VD+
Sbjct: 245 ARPAPAGPMTVVLGPGWPGILLHEAIGHGLEGDFNRKGSSTFSGRIGERVAAKGVTVVDD 304
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+A+RRGS+NIDDEGNPTQCTTLIE+GILKGY+QD MNARLM M +TGNARRESFAH+P
Sbjct: 305 GTIADRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDTMNARLMKMDVTGNARRESFAHLP 364
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G P EI++SVKNGLYA NF GGQVDITNGKFVFSAS+AY+I++GKIT
Sbjct: 365 MPRMTNTYMLGGDKDPGEILASVKNGLYAVNFGGGQVDITNGKFVFSASEAYMIEDGKIT 424
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
YPVKGATLIG+GP++L +VSMIGNDM+LD GVGVCGK+GQ VPVGVGQPTL++D +TVGG
Sbjct: 425 YPVKGATLIGNGPDVLNRVSMIGNDMRLDSGVGVCGKEGQSVPVGVGQPTLRLDGVTVGG 484
Query: 736 T 736
T
Sbjct: 485 T 485
>gi|300310755|ref|YP_003774847.1| Zn-dependent protease [Herbaspirillum seropedicae SmR1]
gi|300073540|gb|ADJ62939.1| Zn-dependent protease protein [Herbaspirillum seropedicae SmR1]
Length = 486
Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/481 (69%), Positives = 412/481 (85%)
Query: 256 QKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVK 315
+ N+ L +AR +LL PF LDE LLK LG+MF +KVDYAD YFQFTK+E W LEEGIVK
Sbjct: 5 EPNMGALQVARDVLLTPFGLDESKLLKALGSMFTHKVDYADLYFQFTKSEGWSLEEGIVK 64
Query: 316 TGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKI 375
TG+FSI+QGVGVRA+SGDKTAF YSD+IS++ L++A +TR+IA Q +GKIK+ +
Sbjct: 65 TGSFSIDQGVGVRAVSGDKTAFSYSDEISESALMDAAAATRTIARQGSGKIKVAGAMIPG 124
Query: 376 KINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGL 435
+LY D ++S++ K++LLERVE+IAR KDPRV +V+A+LSGEYDV+L+ R DG+
Sbjct: 125 GGRALYLPHDPLTSLDATAKVQLLERVERIARAKDPRVKQVMASLSGEYDVVLVARADGV 184
Query: 436 IVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLE 495
+ ADIRPLV++ VT+I E+NGRRE+G+SG GGRY+Y YF+D++LE+ S +V +AL+NLE
Sbjct: 185 LAADIRPLVRVSVTVIAEQNGRREMGSSGGGGRYDYGYFSDVLLEQYASEAVATALVNLE 244
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
++PAPAG M VVLGPGWPGILLHEAIGHGLEGDFNRKGSS FS IG+R+A+K +T+VD+
Sbjct: 245 SRPAPAGPMTVVLGPGWPGILLHEAIGHGLEGDFNRKGSSTFSGRIGERVAAKGVTVVDD 304
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+A+RRGS+NIDDEGNPTQCTTLIE+GILKGY+QD MNARLM M +TGNARRESFAH+P
Sbjct: 305 GTIADRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDTMNARLMKMDVTGNARRESFAHLP 364
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G P EI++SVKNGLYA NF GGQVDITNGKFVFSAS+AY+I++GKIT
Sbjct: 365 MPRMTNTYMLGGDRDPAEILASVKNGLYAVNFGGGQVDITNGKFVFSASEAYMIEDGKIT 424
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
YPVKGATLIG+GP++L +VSMIGNDM+LD GVGVCGK+GQ VPVGVGQPTL++D +TVGG
Sbjct: 425 YPVKGATLIGNGPDVLNRVSMIGNDMRLDSGVGVCGKEGQSVPVGVGQPTLRLDGVTVGG 484
Query: 736 T 736
T
Sbjct: 485 T 485
>gi|393777737|ref|ZP_10366028.1| antibiotic maturation peptidase [Ralstonia sp. PBA]
gi|392715534|gb|EIZ03117.1| antibiotic maturation peptidase [Ralstonia sp. PBA]
Length = 486
Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/482 (64%), Positives = 394/482 (81%)
Query: 255 SQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIV 314
S I L AR +LL P+ LDE L ++L ++F +KVDYAD YFQ T+NE W LEEGIV
Sbjct: 4 SDLGIRNLATARDLLLTPYGLDESQLQRVLADIFTHKVDYADLYFQSTRNEAWSLEEGIV 63
Query: 315 KTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKK 374
K+G+FSI+QGVGVRA+SGD+TAF YSDD+S L A +TR+I +G++K+ +
Sbjct: 64 KSGSFSIDQGVGVRAVSGDRTAFAYSDDLSLPALQQAAAATRTIGKSGSGRVKVAGTLAA 123
Query: 375 IKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDG 434
LY D + S+ +K+ LLERVEK+AR KDPRV++V+A L+GEYDV+L+ R+DG
Sbjct: 124 QPGRDLYLPNDPLDSLGASDKVALLERVEKMARAKDPRVVQVMAGLAGEYDVVLVARSDG 183
Query: 435 LIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINL 494
++ AD+RPLV++ VT+I E+NGRRE G+SG GGRY Y+YFTD +++ V +V SAL+NL
Sbjct: 184 VLAADVRPLVRVSVTVIAEQNGRRETGSSGGGGRYAYSYFTDERMQQYVDEAVASALVNL 243
Query: 495 EAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVD 554
E+ PAPAG M VVLG GWPGILLHEA+GHGLEGDFNRKGSSAF+ +G+R+A+K +T+VD
Sbjct: 244 ESIPAPAGAMTVVLGAGWPGILLHEAVGHGLEGDFNRKGSSAFAGMLGERVAAKGVTVVD 303
Query: 555 NGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHI 614
+GTLANRRGS+N+DDEGNPTQCTTLIE+GIL+GY+QD MNARLM M +TGNARRES+A +
Sbjct: 304 DGTLANRRGSLNLDDEGNPTQCTTLIEDGILRGYIQDTMNARLMKMPVTGNARRESYAAL 363
Query: 615 PIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKI 674
P+PRMTNTYMLNG P+EII+SVK GLYA NF GGQVDITNGKFVFSAS+AY+I++GKI
Sbjct: 364 PMPRMTNTYMLNGDKDPQEIIASVKKGLYAANFGGGQVDITNGKFVFSASEAYLIEDGKI 423
Query: 675 TYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVG 734
T PV+GATL+G GP LK V+MIGNDM+LDPG+GVCGKDGQ VPVGVGQPTL+++++TVG
Sbjct: 424 TAPVRGATLVGSGPESLKHVTMIGNDMRLDPGIGVCGKDGQSVPVGVGQPTLRMENLTVG 483
Query: 735 GT 736
GT
Sbjct: 484 GT 485
>gi|237749195|ref|ZP_04579675.1| microcin B17 maturation protein [Oxalobacter formigenes OXCC13]
gi|229380557|gb|EEO30648.1| microcin B17 maturation protein [Oxalobacter formigenes OXCC13]
Length = 486
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/475 (67%), Positives = 406/475 (85%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L++A+SILLEPF LDE L++ +G +F ++VDYAD YFQFTKNE+W LEEGIVKTG+FSI
Sbjct: 11 LDLAKSILLEPFGLDEPALIRAMGTIFNHQVDYADLYFQFTKNESWSLEEGIVKTGSFSI 70
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QGVGVRA++GDKTAF YSDDIS L +A K+TR+I Q GK+K+ IK ++ +SLY
Sbjct: 71 DQGVGVRAVAGDKTAFSYSDDISGRALEDAAKATRTIGRQGEGKVKLASVIKPVENHSLY 130
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
D + +I+ EK+ LLE+VEK+AR DPR+++V+A L+GE+DV+L+ R+DG++ AD+R
Sbjct: 131 IPNDPLQTISAAEKVALLEKVEKLARAADPRIVQVMAGLAGEFDVVLVARSDGVLAADVR 190
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPA 501
PL++L VT+I E+NGRRE+G SG GGRY Y YFTD ++ V+ + SAL+NLEAKPAPA
Sbjct: 191 PLIRLSVTVIAEQNGRREMGTSGGGGRYGYAYFTDELISHYVNEATRSALVNLEAKPAPA 250
Query: 502 GIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANR 561
G M VVLG GWPG+LLHEAIGHGLEGDFNRKGSSAFS +G+++A+ IT+VD+G++ NR
Sbjct: 251 GPMTVVLGSGWPGVLLHEAIGHGLEGDFNRKGSSAFSGRLGEKVAADGITVVDDGSIRNR 310
Query: 562 RGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTN 621
RGS+N+DDEGNPTQ T LIENGILKGY+QD +NARLMNM++TGNARRESFAH+P+PRMTN
Sbjct: 311 RGSLNMDDEGNPTQRTVLIENGILKGYLQDTLNARLMNMAVTGNARRESFAHLPMPRMTN 370
Query: 622 TYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGA 681
T+ML G +PEEII+SVKNGLYA NF GGQVDITNGKFVFSAS+AY+I+NGK+ YPVKGA
Sbjct: 371 TFMLAGDRNPEEIIASVKNGLYAANFGGGQVDITNGKFVFSASEAYVIENGKLAYPVKGA 430
Query: 682 TLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
TL+G+GP+ILK+V+M+GNDM+LD GVGVCGK+GQ VPVGVGQPTL+I+ +TVGGT
Sbjct: 431 TLVGNGPDILKRVTMVGNDMQLDSGVGVCGKEGQSVPVGVGQPTLRIEDVTVGGT 485
>gi|300703131|ref|YP_003744733.1| peptidase [Ralstonia solanacearum CFBP2957]
gi|299070794|emb|CBJ42091.1| peptidase [Ralstonia solanacearum CFBP2957]
Length = 486
Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/478 (65%), Positives = 401/478 (83%)
Query: 259 IHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGN 318
I L++AR +LL+P+ LDE +L + L ++F ++VDYAD YFQ+T+NE W LEEGIVK+G+
Sbjct: 8 IQNLSVARRVLLDPYGLDEALLQRALADIFTHRVDYADLYFQYTRNEAWSLEEGIVKSGS 67
Query: 319 FSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKIN 378
FSI+QGVGVRA+SGD+TAF YSDDIS L+ A +TR+I G++K+ +++
Sbjct: 68 FSIDQGVGVRAVSGDRTAFAYSDDISLPALMQAAAATRTIGKAGTGRVKVASSLQSQGGR 127
Query: 379 SLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVA 438
+LY+ D + S+ EK+ LLER+EK+AR KDPRV++V+A L+GEYDV+L+ R+DG+I A
Sbjct: 128 ALYAPNDPLDSMTASEKVALLERIEKLARAKDPRVVQVMAGLAGEYDVMLVARSDGVIAA 187
Query: 439 DIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKP 498
D+RPLV++ VT+I E+NGRRE+GNSG GGRY Y YF+D +L++ V +V+SAL+NLEAKP
Sbjct: 188 DVRPLVRVSVTVIAEQNGRREMGNSGGGGRYAYGYFSDDLLQQYVDEAVSSALVNLEAKP 247
Query: 499 APAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL 558
APAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAFS +G+R+A+K +T+VD+GTL
Sbjct: 248 APAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFSGRMGERVAAKGVTVVDDGTL 307
Query: 559 ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPR 618
NRRGS+N+DDEGNPTQC TLIE+GIL GYMQD +NARLM M +TGNARRES+A +P+PR
Sbjct: 308 PNRRGSLNLDDEGNPTQCNTLIEDGILTGYMQDTLNARLMKMPVTGNARRESYASLPMPR 367
Query: 619 MTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPV 678
MTNTYML G P+EII+SVK GLYA NF GGQVDITNGKFVFSAS+AY+I++GKIT PV
Sbjct: 368 MTNTYMLGGDKDPQEIIASVKRGLYAVNFGGGQVDITNGKFVFSASEAYLIEDGKITAPV 427
Query: 679 KGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
KGATL+G+GP LK V+MIGNDM+LD GVGVCGK+GQ VPVGVGQPTL+I+++TVGGT
Sbjct: 428 KGATLVGNGPESLKDVTMIGNDMRLDSGVGVCGKEGQSVPVGVGQPTLRIENMTVGGT 485
>gi|421896994|ref|ZP_16327382.1| zn-dependent protease protein [Ralstonia solanacearum MolK2]
gi|206588159|emb|CAQ18732.1| zn-dependent protease protein [Ralstonia solanacearum MolK2]
Length = 486
Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/478 (65%), Positives = 401/478 (83%)
Query: 259 IHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGN 318
I L++AR +LL+P+ LDE +L + L ++F ++VDYAD YFQ+T+NE W LEEGIVK+G+
Sbjct: 8 IQNLSVARRVLLDPYGLDEALLQRALADIFTHRVDYADLYFQYTRNEAWSLEEGIVKSGS 67
Query: 319 FSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKIN 378
FSI+QGVGVRA+SGD+TAF YSDDIS L+ A +TR+I G++K+ +++
Sbjct: 68 FSIDQGVGVRAVSGDRTAFAYSDDISLPALMQAAAATRTIGKAGTGRVKVASSLQNQGGR 127
Query: 379 SLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVA 438
+LY+ D + S+ EK+ LLER+EK+AR KDPRV++V+A L+GEYDV+L+ R+DG+I A
Sbjct: 128 ALYAPNDPLDSMTASEKVALLERIEKLARAKDPRVVQVMAGLAGEYDVMLVARSDGVIAA 187
Query: 439 DIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKP 498
D+RPLV++ VT+I E+NGRRE+GNSG GGRY Y YF+D +L++ V +V+SAL+NLEAKP
Sbjct: 188 DVRPLVRVSVTVIAEQNGRREMGNSGGGGRYAYGYFSDDLLQQYVDEAVSSALVNLEAKP 247
Query: 499 APAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL 558
APAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAFS +G+R+A+K +T+VD+GTL
Sbjct: 248 APAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFSGRMGERVAAKGVTVVDDGTL 307
Query: 559 ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPR 618
NRRGS+N+DDEGNPTQC TLIE+GIL GYMQD +NARLM M +TGNARRES+A +P+PR
Sbjct: 308 PNRRGSLNLDDEGNPTQCNTLIEDGILTGYMQDTLNARLMKMPVTGNARRESYASLPMPR 367
Query: 619 MTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPV 678
MTNTYML G P+EII+SVK GLYA NF GGQVDITNGKFVFSAS+AY+I++GKIT PV
Sbjct: 368 MTNTYMLGGDKDPQEIIASVKRGLYAVNFGGGQVDITNGKFVFSASEAYLIEDGKITAPV 427
Query: 679 KGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
KGATL+G+GP LK V+MIGNDM+LD GVGVCGK+GQ VPVGVGQPTL+I+++TVGGT
Sbjct: 428 KGATLVGNGPESLKDVTMIGNDMRLDSGVGVCGKEGQSVPVGVGQPTLRIENMTVGGT 485
>gi|386332511|ref|YP_006028680.1| peptidase [Ralstonia solanacearum Po82]
gi|334194958|gb|AEG68143.1| peptidase [Ralstonia solanacearum Po82]
Length = 486
Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/478 (65%), Positives = 401/478 (83%)
Query: 259 IHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGN 318
I L++AR +LL+P+ LDE +L + L ++F ++VDYAD YFQ+T+NE W LEEGIVK+G+
Sbjct: 8 IQNLSVARRVLLDPYGLDEALLQRALADIFTHRVDYADLYFQYTRNEAWSLEEGIVKSGS 67
Query: 319 FSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKIN 378
FSI+QGVGVRA+SGD+TAF YSDDIS L+ A +TR+I G++K+ +++
Sbjct: 68 FSIDQGVGVRAVSGDRTAFAYSDDISLPALMQAAAATRTIGKAGAGRVKVASSLQSQGGR 127
Query: 379 SLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVA 438
+LY+ D + S+ EK+ LLER+EK+AR KDPRV++V+A L+GEYDV+L+ R+DG+I A
Sbjct: 128 ALYAPNDPLDSMTASEKVALLERIEKLARAKDPRVVQVMAGLAGEYDVMLVARSDGVIAA 187
Query: 439 DIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKP 498
D+RPLV++ VT+I E+NGRRE+GNSG GGRY Y YF+D +L++ V +V+SAL+NLEAKP
Sbjct: 188 DVRPLVRVSVTVIAEQNGRREMGNSGGGGRYAYGYFSDDLLQQYVDEAVSSALVNLEAKP 247
Query: 499 APAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL 558
APAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAFS +G+R+A+K +T+VD+GTL
Sbjct: 248 APAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFSGRMGERVAAKGVTVVDDGTL 307
Query: 559 ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPR 618
NRRGS+N+DDEGNPTQC TLIE+GIL GYMQD +NARLM M +TGNARRES+A +P+PR
Sbjct: 308 PNRRGSLNLDDEGNPTQCNTLIEDGILTGYMQDTLNARLMKMPVTGNARRESYASLPMPR 367
Query: 619 MTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPV 678
MTNTYML G P+EII+SVK GLYA NF GGQVDITNGKFVFSAS+AY+I++GKIT PV
Sbjct: 368 MTNTYMLGGDKDPQEIIASVKRGLYAVNFGGGQVDITNGKFVFSASEAYLIEDGKITAPV 427
Query: 679 KGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
KGATL+G+GP LK V+MIGNDM+LD GVGVCGK+GQ VPVGVGQPTL+I+++TVGGT
Sbjct: 428 KGATLVGNGPESLKDVTMIGNDMRLDSGVGVCGKEGQSVPVGVGQPTLRIENMTVGGT 485
>gi|83747242|ref|ZP_00944284.1| TldD protein [Ralstonia solanacearum UW551]
gi|207744228|ref|YP_002260620.1| zn-dependent protease protein [Ralstonia solanacearum IPO1609]
gi|83726066|gb|EAP73202.1| TldD protein [Ralstonia solanacearum UW551]
gi|206595633|emb|CAQ62560.1| zn-dependent protease protein [Ralstonia solanacearum IPO1609]
Length = 486
Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/478 (65%), Positives = 400/478 (83%)
Query: 259 IHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGN 318
I L++AR +LL+P+ LDE +L + L ++F ++VDYAD YFQ+T+NE W LEEGIVK+G+
Sbjct: 8 IQNLSVARRVLLDPYGLDEALLQRALADIFTHRVDYADLYFQYTRNEAWSLEEGIVKSGS 67
Query: 319 FSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKIN 378
FSI+QGVGVRA+SGD+TAF YSDDIS L+ A +TR+I G++K+ +++
Sbjct: 68 FSIDQGVGVRAVSGDRTAFAYSDDISLPALMQAAAATRTIGKAGAGRVKVASSLQSQGGR 127
Query: 379 SLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVA 438
+LY+ D + S+ EK+ LLER+EK+AR KDPRV++V+A L+GEYDV+L+ R+DG+I A
Sbjct: 128 ALYAPNDPLDSMTASEKVALLERIEKLARAKDPRVVQVMAGLAGEYDVMLVARSDGVIAA 187
Query: 439 DIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKP 498
D+RPLV++ VT+I E+NGRRE+GNSG GGRY Y YF+D +L++ V +V+SAL+NLEAKP
Sbjct: 188 DVRPLVRVSVTVIAEQNGRREMGNSGGGGRYAYGYFSDDLLQQYVDEAVSSALVNLEAKP 247
Query: 499 APAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL 558
APAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAFS +G+R+A+K +T+VD+GTL
Sbjct: 248 APAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFSGRMGERVAAKGVTVVDDGTL 307
Query: 559 ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPR 618
NRRGS+N+DDEGNPTQC TLIE+GIL GYMQD +NARLM M +TGNARRES+A +P+PR
Sbjct: 308 PNRRGSLNLDDEGNPTQCNTLIEDGILTGYMQDTLNARLMKMPVTGNARRESYASLPMPR 367
Query: 619 MTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPV 678
MTNTYML G P+EII+SVK GLYA NF GGQVDITNGKFVFSAS+AY+I++GKIT PV
Sbjct: 368 MTNTYMLGGDKDPQEIIASVKRGLYAVNFGGGQVDITNGKFVFSASEAYLIEDGKITAPV 427
Query: 679 KGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
KGATL+G+GP LK V+MIGNDM+LD GVGVCGK+GQ VPV VGQPTL+I+++TVGGT
Sbjct: 428 KGATLVGNGPESLKDVTMIGNDMRLDSGVGVCGKEGQSVPVAVGQPTLRIENMTVGGT 485
>gi|374365384|ref|ZP_09623474.1| microcin-processing peptidase 2 [Cupriavidus basilensis OR16]
gi|373102957|gb|EHP43988.1| microcin-processing peptidase 2 [Cupriavidus basilensis OR16]
Length = 488
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/480 (66%), Positives = 400/480 (83%), Gaps = 2/480 (0%)
Query: 259 IHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGN 318
I L A+ +LL P+ LDE L ++L ++F +KVDYAD YFQ+T+NE W LEEGIVK+G+
Sbjct: 8 IRNLATAQQLLLAPYGLDETNLQRVLADIFTHKVDYADLYFQYTRNEAWSLEEGIVKSGS 67
Query: 319 FSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKIN 378
FSI+QGVGVRA+SGDKTAF YSDDIS + L+ A +TR+I +G++K+ +
Sbjct: 68 FSIDQGVGVRAVSGDKTAFAYSDDISLDALLKAGAATRTIGRAGSGRVKVASKMTTASQG 127
Query: 379 S--LYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLI 436
LYS D + S++ EK+ LLERVE++AR KDPRV++V+A L+GEYDV+L+ R+DG+I
Sbjct: 128 GRNLYSPNDPLDSMDAAEKVALLERVERMARAKDPRVVQVMAGLAGEYDVVLVARSDGVI 187
Query: 437 VADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEA 496
AD+RPLV++ VT+I E+NGRREIG+SG GGRY Y YFTD +L K V +V SAL+NLEA
Sbjct: 188 AADVRPLVRVSVTVIAEQNGRREIGSSGGGGRYAYGYFTDELLRKYVDEAVASALVNLEA 247
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
+PAPAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAF+ +G+R+A+K +T+VD+G
Sbjct: 248 RPAPAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRMGERVAAKGVTVVDDG 307
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TLANRRGS+N+DDEGNPTQCTTLIE+GILKGY+QD +NARLM M +TGNARRES+A +P+
Sbjct: 308 TLANRRGSLNLDDEGNPTQCTTLIEDGILKGYIQDTLNARLMKMPVTGNARRESYAALPM 367
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYMLNG P+EII+SVK GLYA NF GGQVDITNGKFVFSAS+AY+I++GKIT
Sbjct: 368 PRMTNTYMLNGNRDPQEIIASVKRGLYAVNFGGGQVDITNGKFVFSASEAYLIEDGKITT 427
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATL+G+GP LK V+MIGNDM+LD GVGVCGK+GQ VPVGVGQPTL+I+++TVGGT
Sbjct: 428 PVKGATLVGNGPESLKDVTMIGNDMRLDSGVGVCGKEGQSVPVGVGQPTLRIENMTVGGT 487
>gi|17547378|ref|NP_520780.1| TldD protein [Ralstonia solanacearum GMI1000]
gi|17429681|emb|CAD16366.1| putative zn-dependent protease protein [Ralstonia solanacearum
GMI1000]
Length = 486
Score = 676 bits (1744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/478 (65%), Positives = 399/478 (83%)
Query: 259 IHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGN 318
I L++AR +LL+P+ LDE L + L ++F ++VDYAD YFQ+T+NE W LEEGIVK+G+
Sbjct: 8 IQNLSVARRVLLDPYGLDEAQLQRALADIFTHRVDYADLYFQYTRNEAWSLEEGIVKSGS 67
Query: 319 FSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKIN 378
FSI+QGVGVRA+SG++TAF YSDDIS L+ A +TR+I G++K+ +++
Sbjct: 68 FSIDQGVGVRAVSGERTAFAYSDDISLPALMQAAAATRTIGRAGAGRVKVAGSLQSQGGR 127
Query: 379 SLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVA 438
+LY+ D + S+ EK+ LLER+EK+AR KDPRV++V+A L+GEYDV+L+ R+DG+I A
Sbjct: 128 ALYTPNDPLDSMTASEKVALLERIEKLARAKDPRVVQVMAGLAGEYDVMLVARSDGVIAA 187
Query: 439 DIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKP 498
D+RPLV++ VT+I E+NGRRE+GNSG GGRY Y YFTD +L + V +V+SAL+NLEAKP
Sbjct: 188 DVRPLVRVSVTVIAEQNGRREMGNSGGGGRYAYGYFTDELLHQYVDEAVSSALVNLEAKP 247
Query: 499 APAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL 558
APAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAFS +G+R+A+K +T+VD+GTL
Sbjct: 248 APAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFSGRMGERVAAKGVTVVDDGTL 307
Query: 559 ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPR 618
NRRGS+N+DDEGNPTQC TLIE+GIL GYMQD +NARLM M +TGNARRES+A +P+PR
Sbjct: 308 PNRRGSLNLDDEGNPTQCNTLIEDGILTGYMQDTLNARLMKMPVTGNARRESYASLPMPR 367
Query: 619 MTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPV 678
MTNTYML G P+EII+SVK GLYA NF GGQVDITNGKFVFSAS+AY+I++GKIT PV
Sbjct: 368 MTNTYMLGGDKDPQEIIASVKRGLYAVNFGGGQVDITNGKFVFSASEAYLIEDGKITTPV 427
Query: 679 KGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
KGATL+G+GP LK V+MIGNDM+LD GVGVCGK+GQ VPVGVGQPTL+I+++TVGGT
Sbjct: 428 KGATLVGNGPESLKDVTMIGNDMRLDSGVGVCGKEGQSVPVGVGQPTLRIENMTVGGT 485
>gi|421890840|ref|ZP_16321683.1| peptidase [Ralstonia solanacearum K60-1]
gi|378963809|emb|CCF98431.1| peptidase [Ralstonia solanacearum K60-1]
Length = 486
Score = 676 bits (1743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/478 (65%), Positives = 400/478 (83%)
Query: 259 IHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGN 318
I L++AR +LL+P+ LDE +L + L ++F ++VDYAD YFQ+T+NE W LEEGIVK+G+
Sbjct: 8 IQNLSVARRVLLDPYGLDEALLQRALADIFTHRVDYADLYFQYTRNEAWSLEEGIVKSGS 67
Query: 319 FSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKIN 378
FSI+QGVGVRA+SGD+TAF YSDDIS L+ A +TR+I G++K+ +++
Sbjct: 68 FSIDQGVGVRAVSGDRTAFAYSDDISLPALMQAAAATRTIGKAGAGRVKVASSLQSQGGR 127
Query: 379 SLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVA 438
+LY+ D + S+ EK+ LLER+EK+AR KDPRV++V+A L+GEYD++L+ R+DG+I A
Sbjct: 128 ALYAPNDPLDSMTASEKVALLERIEKLARAKDPRVVQVMAGLAGEYDMMLVARSDGVIAA 187
Query: 439 DIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKP 498
D+RPLV++ VT+I E+NGRRE+GNSG GGRY Y YF+D +L++ V +V+SAL+NLEAKP
Sbjct: 188 DVRPLVRVSVTVIAEQNGRREMGNSGGGGRYAYGYFSDDLLQQYVDEAVSSALVNLEAKP 247
Query: 499 APAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL 558
APAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAFS +G+R+A+K +T+VD+GTL
Sbjct: 248 APAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFSGRMGERVAAKGVTVVDDGTL 307
Query: 559 ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPR 618
NRRGS+N+DDEGNPTQC LIE+GIL GYMQD +NARLM M +TGNARRES+A +P+PR
Sbjct: 308 PNRRGSLNLDDEGNPTQCNPLIEDGILTGYMQDTLNARLMKMPVTGNARRESYASLPMPR 367
Query: 619 MTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPV 678
MTNTYML G P+EII+SVK GLYA NF GGQVDITNGKFVFSAS+AY+I++GKIT PV
Sbjct: 368 MTNTYMLGGDKDPQEIIASVKRGLYAVNFGGGQVDITNGKFVFSASEAYLIEDGKITAPV 427
Query: 679 KGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
KGATL+G+GP LK V+MIGNDM+LD GVGVCGK+GQ VPVGVGQPTL+I+++TVGGT
Sbjct: 428 KGATLVGNGPESLKDVTMIGNDMRLDSGVGVCGKEGQSVPVGVGQPTLRIENMTVGGT 485
>gi|299065783|emb|CBJ36960.1| peptidase [Ralstonia solanacearum CMR15]
Length = 486
Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/478 (65%), Positives = 400/478 (83%)
Query: 259 IHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGN 318
I L++AR +LL+P+ LDE L + L ++F ++VDYAD YFQ+T+NE W LEEGIVK+G+
Sbjct: 8 IQNLSVARRVLLDPYGLDEAQLQRALADIFTHRVDYADLYFQYTRNEAWSLEEGIVKSGS 67
Query: 319 FSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKIN 378
FSI+QGVGVRA+SG++TAF YSDDIS L+ A +TR+I G+IK+ +++
Sbjct: 68 FSIDQGVGVRAVSGERTAFAYSDDISLPALMQAAAATRTIGRAGAGRIKVASSLQSQGGR 127
Query: 379 SLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVA 438
+LY+ D + S+ EK+ LLER+EK+AR KDPRV++V+A L+GEYDV+L+ R+DG+I A
Sbjct: 128 ALYAPNDPLDSMTASEKVALLERIEKLARAKDPRVVQVMAGLAGEYDVMLVARSDGVIAA 187
Query: 439 DIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKP 498
D+RPLV++ VT+I E+NGRRE+GNSG GGRY Y YF+D +L++ V +V+SAL+NLEAKP
Sbjct: 188 DVRPLVRVSVTVIAEQNGRREMGNSGGGGRYAYGYFSDDLLQQYVDEAVSSALVNLEAKP 247
Query: 499 APAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL 558
APAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAFS +G+R+A+K +T+VD+GTL
Sbjct: 248 APAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFSGRMGERVAAKGVTVVDDGTL 307
Query: 559 ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPR 618
NRRGS+N+DDEGNPTQC TLIE+GIL GYMQD +NARLM M +TGNARRES+A +P+PR
Sbjct: 308 PNRRGSLNLDDEGNPTQCNTLIEDGILTGYMQDTLNARLMKMPVTGNARRESYASLPMPR 367
Query: 619 MTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPV 678
MTNTYML G P+EII+SVK GLYA NF GGQVDITNGKFVFSAS+AY+I++GKIT PV
Sbjct: 368 MTNTYMLGGDKDPQEIIASVKRGLYAVNFGGGQVDITNGKFVFSASEAYLIEDGKITTPV 427
Query: 679 KGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
KGATL+G+GP LK V+MIGNDM+LD G+GVCGK+GQ VPVGVGQPTL+I+++TVGGT
Sbjct: 428 KGATLVGNGPESLKDVTMIGNDMRLDSGIGVCGKEGQSVPVGVGQPTLRIENMTVGGT 485
>gi|194289229|ref|YP_002005136.1| antibiotic maturation peptidase [Cupriavidus taiwanensis LMG 19424]
gi|193223064|emb|CAQ69069.1| antibiotic maturation peptidase [Cupriavidus taiwanensis LMG 19424]
Length = 486
Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/479 (65%), Positives = 401/479 (83%)
Query: 258 NIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTG 317
I L A+ +LL P+ LDE L ++L ++F +KVDYAD YFQ+T+NE W LEEGIVK+G
Sbjct: 7 GIRNLATAQQLLLAPYGLDEARLQRVLADIFTHKVDYADLYFQYTRNEAWSLEEGIVKSG 66
Query: 318 NFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKI 377
+FSI+QGVGVRA+SGD+TAF YSD+IS L A +TR+I +G+IK+ +
Sbjct: 67 SFSIDQGVGVRAVSGDRTAFAYSDEISLPALSQAAAATRTIGKAGSGRIKVAGELATQAG 126
Query: 378 NSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIV 437
+LYS D + S++ EK+ LLER+E++AR KDPRV++V+A L+GEYDV+L+ R+DG+I
Sbjct: 127 RNLYSPNDPLDSMSAAEKVALLERIERMARAKDPRVVQVMAGLAGEYDVVLVARSDGVIA 186
Query: 438 ADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAK 497
AD+RPLV++ VT+I E+ GRREIG+SG GGRY Y YFTD +L++ V +V+SAL+NL+A+
Sbjct: 187 ADVRPLVRVSVTVIAEQGGRREIGSSGGGGRYAYGYFTDALLQQYVDEAVSSALVNLDAR 246
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
PAPAG M VVLGPGWPG+LLHEA+GHGLEGDFNRKGSSAF+ +G+R+A++ +T+VD+GT
Sbjct: 247 PAPAGAMTVVLGPGWPGVLLHEAVGHGLEGDFNRKGSSAFAGRMGERVAARGVTVVDDGT 306
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
LANRRGS+N+DDEGNPTQCTTLIE+GIL+GY+QD +NARLM M +TGNARRES+A +P+P
Sbjct: 307 LANRRGSLNLDDEGNPTQCTTLIEDGILRGYIQDTLNARLMKMPVTGNARRESYAALPMP 366
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNTYMLNG P+EII+SVK GLYA NF GGQVDITNGKFVFSAS+AY+I++GKITYP
Sbjct: 367 RMTNTYMLNGDKDPQEIIASVKKGLYAVNFGGGQVDITNGKFVFSASEAYMIEDGKITYP 426
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
VKGATL+G+GP LK V+MIGNDM+LD GVGVCGK+GQ VPVGVGQPTL+I+++TVGGT
Sbjct: 427 VKGATLVGNGPESLKDVTMIGNDMRLDSGVGVCGKEGQSVPVGVGQPTLRIENMTVGGT 485
>gi|73540730|ref|YP_295250.1| microcin-processing peptidase 2 [Ralstonia eutropha JMP134]
gi|72118143|gb|AAZ60406.1| microcin-processing peptidase 2, Unknown type peptidase, MEROPS
family U62 [Ralstonia eutropha JMP134]
Length = 498
Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/478 (65%), Positives = 399/478 (83%)
Query: 259 IHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGN 318
I L A+ +LL P+ LDE L ++L ++F +KVDYAD YFQ+T+NE W LEEGIVK+G+
Sbjct: 20 IRNLATAQQLLLAPYGLDEAKLQRVLADIFTHKVDYADLYFQYTRNEAWSLEEGIVKSGS 79
Query: 319 FSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKIN 378
FSI+QGVGVRA+SGDKTAF YSDDIS L A +TR+I +G++K+ +
Sbjct: 80 FSIDQGVGVRAVSGDKTAFAYSDDISLPALSQAAAATRTIGRAGSGRVKVAGELASQTGR 139
Query: 379 SLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVA 438
+LY+ D + S+ EK+ LLERVE++AR KDPRV++V+A L+GEYDV+L+ R+DG++ A
Sbjct: 140 NLYTPNDPLDSMAAAEKVALLERVERMARAKDPRVVQVMAGLAGEYDVVLVARSDGVLAA 199
Query: 439 DIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKP 498
D+RPLV++ VT+I E NGRRE+G+SG GGRY Y YFTD +L+K V +V+SAL+NL+A+P
Sbjct: 200 DVRPLVRVSVTVIAEHNGRREMGSSGGGGRYAYGYFTDELLQKYVDEAVSSALVNLDARP 259
Query: 499 APAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL 558
APAG M VVLGPGWPG+LLHEA+GHGLEGDFNRKGSSAF+ +G+R+A+K +T+VD+GTL
Sbjct: 260 APAGAMTVVLGPGWPGVLLHEAVGHGLEGDFNRKGSSAFAGRMGERVAAKGVTVVDDGTL 319
Query: 559 ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPR 618
ANRRGS+N+DDEGN TQCTTLIE+GIL+GY+QD +NARLM M +TGNARRES+A +P+PR
Sbjct: 320 ANRRGSLNLDDEGNATQCTTLIEDGILRGYIQDTLNARLMKMPVTGNARRESYAALPMPR 379
Query: 619 MTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPV 678
MTNTYMLNG P+EII+SVK GLYA NF GGQVDITNGKFVFSAS+AY+I++GKITYPV
Sbjct: 380 MTNTYMLNGDRDPQEIIASVKKGLYAVNFGGGQVDITNGKFVFSASEAYMIEDGKITYPV 439
Query: 679 KGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
KGATL+G+GP LK V+MIGNDM+LD GVGVCGK+GQ VPVGVGQPTL+I+++TVGGT
Sbjct: 440 KGATLVGNGPESLKDVTMIGNDMRLDSGVGVCGKEGQSVPVGVGQPTLRIENMTVGGT 497
>gi|94309936|ref|YP_583146.1| peptidase [Cupriavidus metallidurans CH34]
gi|430805091|ref|ZP_19432206.1| peptidase [Cupriavidus sp. HMR-1]
gi|93353788|gb|ABF07877.1| Peptidase [Cupriavidus metallidurans CH34]
gi|429502693|gb|ELA01000.1| peptidase [Cupriavidus sp. HMR-1]
Length = 486
Score = 674 bits (1740), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/478 (65%), Positives = 399/478 (83%)
Query: 259 IHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGN 318
I L A+ +LL P+ LDE L ++L ++F +KVDYAD YFQ T+NE W LEEGIVK+G+
Sbjct: 8 IRNLATAQQLLLAPYGLDEAKLQRVLADIFTHKVDYADLYFQHTRNEAWSLEEGIVKSGS 67
Query: 319 FSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKIN 378
FSI+QGVGVRA+SGDKTAF YSDDIS L A +TR+I G++K+ ++
Sbjct: 68 FSIDQGVGVRAVSGDKTAFAYSDDISLPALSQAAAATRTIGKSGGGRVKVAGSLASHTGR 127
Query: 379 SLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVA 438
+LY+ D + S+ EK+ LLE++EK+AR KDPRV++V+A L+GEYDV+L+ R+DG+I A
Sbjct: 128 NLYAPNDPLDSMTATEKVALLEKIEKLARAKDPRVVQVMAGLAGEYDVVLVARSDGVIAA 187
Query: 439 DIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKP 498
D+RPLV++ VT+I E+NGRREIG+SG GGRY Y YFTD +L K V +V+SAL+NLEA+P
Sbjct: 188 DVRPLVRVSVTVIAEQNGRREIGSSGGGGRYAYGYFTDDLLRKYVDEAVSSALVNLEARP 247
Query: 499 APAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL 558
APAG M VVLGPGWPG+LLHEA+GHGLEGDFNRKGSSAF+ +G+R+A+K +T+VD+GT+
Sbjct: 248 APAGAMTVVLGPGWPGVLLHEAVGHGLEGDFNRKGSSAFAGRMGERVAAKGVTVVDDGTI 307
Query: 559 ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPR 618
ANRRGS+N+DDEGNPTQCTTLIE+GIL+GY+QD +NARLM M +TGNARRES+A +P+PR
Sbjct: 308 ANRRGSLNLDDEGNPTQCTTLIEDGILRGYIQDTLNARLMKMPVTGNARRESYAALPMPR 367
Query: 619 MTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPV 678
MTNTYMLNG P+EI++SVK GLYA NF GGQVDITNGKFVFSAS+AY+I++GKITYPV
Sbjct: 368 MTNTYMLNGDRDPQEILASVKRGLYAVNFGGGQVDITNGKFVFSASEAYMIEDGKITYPV 427
Query: 679 KGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
KGATL+G+GP LK V+MIGNDM+LD GVGVCGK+GQ VPVGVGQPTL+I+++TVGGT
Sbjct: 428 KGATLVGNGPESLKDVTMIGNDMRLDSGVGVCGKEGQSVPVGVGQPTLRIENMTVGGT 485
>gi|309781334|ref|ZP_07676070.1| acid phosphatase SurE [Ralstonia sp. 5_7_47FAA]
gi|404397004|ref|ZP_10988798.1| hypothetical protein HMPREF0989_00909 [Ralstonia sp. 5_2_56FAA]
gi|308919747|gb|EFP65408.1| acid phosphatase SurE [Ralstonia sp. 5_7_47FAA]
gi|348617022|gb|EGY66503.1| hypothetical protein HMPREF0989_00909 [Ralstonia sp. 5_2_56FAA]
Length = 487
Score = 674 bits (1738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/479 (65%), Positives = 400/479 (83%), Gaps = 1/479 (0%)
Query: 259 IHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGN 318
I L+IAR +LL+P+ LDE L + L ++F ++V+YAD YFQ+T+NE W LEEGIVK+G+
Sbjct: 8 IQNLSIARRVLLDPYGLDEAHLQRALADIFTHRVNYADLYFQYTRNEAWSLEEGIVKSGS 67
Query: 319 FSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIK-I 377
FSI+QGVGVRA+SGD+TAF YSDDIS L+ A +TR+I G++K+ ++
Sbjct: 68 FSIDQGVGVRAVSGDRTAFAYSDDISLPALMQAAAATRTIGKAGAGRVKVASSLASTPGS 127
Query: 378 NSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIV 437
+SLY+ D + S+ EK+ LLER+EK+AR KDPRV++V+A L+GEYDV+L+ R+DG+I
Sbjct: 128 HSLYAPNDPLDSMTASEKVALLERIEKLARAKDPRVVQVMAGLAGEYDVMLVARSDGVIA 187
Query: 438 ADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAK 497
AD+RPLV++ VT+I E+NGRRE+G+SG GGRY Y YFTD +L + V +V+SAL+NLEAK
Sbjct: 188 ADVRPLVRISVTVIAEQNGRREMGSSGGGGRYAYGYFTDDLLREYVDEAVSSALVNLEAK 247
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
PAPAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAFS +G+R+A+K +T+VD+GT
Sbjct: 248 PAPAGTMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFSGRMGERVAAKGVTVVDDGT 307
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
LANRRGS+N+DDEGNPTQC TLIE+GIL GYMQD +NARLM M +TGNARRES+A +P+P
Sbjct: 308 LANRRGSLNLDDEGNPTQCNTLIEDGILTGYMQDTLNARLMKMPVTGNARRESYAALPMP 367
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNTYML G P+EII+SVK GLYA NF GGQVDITNGKFVFSAS+AY+I++GKITYP
Sbjct: 368 RMTNTYMLGGDKDPQEIIASVKKGLYAVNFGGGQVDITNGKFVFSASEAYMIEDGKITYP 427
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
VKGATL+G GP LK V+MIGNDM+LD G+GVCGK+GQ VPVGVGQPTL+++++TVGGT
Sbjct: 428 VKGATLVGSGPESLKHVTMIGNDMRLDSGIGVCGKEGQSVPVGVGQPTLRMENMTVGGT 486
>gi|241664074|ref|YP_002982434.1| peptidase U62 modulator of DNA gyrase [Ralstonia pickettii 12D]
gi|240866101|gb|ACS63762.1| peptidase U62 modulator of DNA gyrase [Ralstonia pickettii 12D]
Length = 487
Score = 673 bits (1737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/479 (65%), Positives = 400/479 (83%), Gaps = 1/479 (0%)
Query: 259 IHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGN 318
I L+IAR +LL+P+ LDE L + L ++F ++V+YAD YFQ+T+NE W LEEGIVK+G+
Sbjct: 8 IQNLSIARRVLLDPYGLDEAHLQRALADIFTHRVNYADLYFQYTRNEAWSLEEGIVKSGS 67
Query: 319 FSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIK-I 377
FSI+QGVGVRA+SGD+TAF YSDDIS L+ A +TR+I G++K+ ++
Sbjct: 68 FSIDQGVGVRAVSGDRTAFAYSDDISLPALMQAAGATRTIGKAGAGRVKVASSLASTPGS 127
Query: 378 NSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIV 437
+SLY+ D + S+ EK+ LLER+EK+AR KDPRV++V+A L+GEYDV+L+ R+DG+I
Sbjct: 128 HSLYAPNDPLDSMTASEKVALLERIEKLARAKDPRVVQVMAGLAGEYDVMLVARSDGVIA 187
Query: 438 ADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAK 497
AD+RPLV++ VT+I E+NGRRE+G+SG GGRY Y YFTD +L + V +V+SAL+NLEAK
Sbjct: 188 ADVRPLVRISVTVIAEQNGRREMGSSGGGGRYAYGYFTDDLLREYVDEAVSSALVNLEAK 247
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
PAPAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAFS +G+R+A+K +T+VD+GT
Sbjct: 248 PAPAGTMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFSGRMGERVAAKGVTVVDDGT 307
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
LANRRGS+N+DDEGNPTQC TLIE+GIL GYMQD +NARLM M +TGNARRES+A +P+P
Sbjct: 308 LANRRGSLNLDDEGNPTQCNTLIEDGILTGYMQDTLNARLMKMPVTGNARRESYAALPMP 367
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNTYML G P+EII+SVK GLYA NF GGQVDITNGKFVFSAS+AY+I++GKITYP
Sbjct: 368 RMTNTYMLGGDKDPQEIIASVKKGLYAVNFGGGQVDITNGKFVFSASEAYMIEDGKITYP 427
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
VKGATL+G GP LK V+MIGNDM+LD G+GVCGK+GQ VPVGVGQPTL+++++TVGGT
Sbjct: 428 VKGATLVGSGPESLKHVTMIGNDMRLDSGIGVCGKEGQSVPVGVGQPTLRMENMTVGGT 486
>gi|187929964|ref|YP_001900451.1| peptidase U62 modulator of DNA gyrase [Ralstonia pickettii 12J]
gi|187726854|gb|ACD28019.1| peptidase U62 modulator of DNA gyrase [Ralstonia pickettii 12J]
Length = 487
Score = 671 bits (1731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/479 (65%), Positives = 399/479 (83%), Gaps = 1/479 (0%)
Query: 259 IHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGN 318
I L+IAR +LL+P+ LDE L + L ++F ++V+YAD YFQ+T+NE W LEEGIVK+G+
Sbjct: 8 IQNLSIARRVLLDPYGLDEAHLQRALADIFTHRVNYADLYFQYTRNEAWSLEEGIVKSGS 67
Query: 319 FSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIK-I 377
FSI+QGVGVRA+SGD+TAF YSDDIS L+ A +TR+I G++K+ ++
Sbjct: 68 FSIDQGVGVRAVSGDRTAFAYSDDISLPALMQAAGATRTIGKAGAGRVKVAGSLASTPGS 127
Query: 378 NSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIV 437
+SLY+ D + S+ EK+ LLER+EK+AR KDPRV++V+A L+GEYDV+L+ R+DG+I
Sbjct: 128 HSLYAPNDPLDSMTASEKVALLERIEKLARAKDPRVVQVMAGLAGEYDVMLVARSDGVIA 187
Query: 438 ADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAK 497
AD+RPLV++ VT+I E+NGRRE+G+SG GGRY Y YFTD +L + V +V+SAL+NLEAK
Sbjct: 188 ADVRPLVRISVTVIAEQNGRREMGSSGGGGRYAYGYFTDELLREYVDEAVSSALVNLEAK 247
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
PAPAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAFS +G+R+A+K +T+VD+GT
Sbjct: 248 PAPAGTMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFSGRMGERVAAKGVTVVDDGT 307
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
LANRRGS+N+DDEGNPTQC TLIE+GIL GYMQD +NARLM M +TGNARRES+A +P+P
Sbjct: 308 LANRRGSLNLDDEGNPTQCNTLIEDGILTGYMQDTLNARLMKMPVTGNARRESYAALPMP 367
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNTYML G P+EII+SVK GLYA NF GGQVDITNGKFVFSAS+AY+I++GKIT P
Sbjct: 368 RMTNTYMLGGDKDPQEIIASVKKGLYAVNFGGGQVDITNGKFVFSASEAYMIEDGKITAP 427
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
VKGATL+G GP LK V+MIGNDM+LD G+GVCGK+GQ VPVGVGQPTL+++++TVGGT
Sbjct: 428 VKGATLVGSGPESLKHVTMIGNDMRLDSGIGVCGKEGQSVPVGVGQPTLRMENMTVGGT 486
>gi|300690524|ref|YP_003751519.1| peptidase [Ralstonia solanacearum PSI07]
gi|299077584|emb|CBJ50217.1| peptidase [Ralstonia solanacearum PSI07]
gi|344167511|emb|CCA79742.1| protein tldD homolog [blood disease bacterium R229]
Length = 486
Score = 669 bits (1727), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/478 (65%), Positives = 398/478 (83%)
Query: 259 IHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGN 318
I L++AR +LL+P+ LDE L + L ++F ++VDYAD YFQ+T+NE W LEEGIVK+G+
Sbjct: 8 IQNLSVARRVLLDPYGLDEAQLQRALADIFTHRVDYADLYFQYTRNEAWSLEEGIVKSGS 67
Query: 319 FSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKIN 378
FSI+QGVGVRA+SGD+TAF YSDDIS L+ A +TR+I G++K+ +++
Sbjct: 68 FSIDQGVGVRAVSGDRTAFAYSDDISLPALMQAAAATRTIGRAGAGRVKVAGSLQSQGGR 127
Query: 379 SLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVA 438
+LY+ D + S+ EK+ LLER+EK+AR KDPRV++V+A L+GEYDV+L+ R+DG+I A
Sbjct: 128 ALYASNDPLDSMTASEKVALLERIEKLARAKDPRVVQVMAGLAGEYDVMLVARSDGVIAA 187
Query: 439 DIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKP 498
D+RPLV++ VT+I E+NGRRE+GNSG GGRY Y YFTD +L++ V +V+SAL+NLEAKP
Sbjct: 188 DVRPLVRVSVTVIAEQNGRREMGNSGGGGRYAYGYFTDDLLQQYVDEAVSSALVNLEAKP 247
Query: 499 APAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL 558
APAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAFS +G+R+A+K +T+VD+GTL
Sbjct: 248 APAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFSGRMGERVAAKGVTVVDDGTL 307
Query: 559 ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPR 618
NRRGS+N+DDEGNPTQ LIE+GIL GYMQD +NARLM M +TGNARRES+A +P+PR
Sbjct: 308 PNRRGSLNLDDEGNPTQYNPLIEDGILTGYMQDTLNARLMKMPVTGNARRESYASLPMPR 367
Query: 619 MTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPV 678
MTNTYML G P+EII+SVK GLYA NF GGQVDITNGKFVFSAS+AY+I++G+IT PV
Sbjct: 368 MTNTYMLGGDKDPQEIIASVKRGLYAVNFGGGQVDITNGKFVFSASEAYLIEDGRITTPV 427
Query: 679 KGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
KGATL+G+GP LK V+MIGNDM+LD G+GVCGK+GQ VPVGVGQPTL+I+++TVGGT
Sbjct: 428 KGATLVGNGPESLKDVTMIGNDMRLDSGIGVCGKEGQSVPVGVGQPTLRIENMTVGGT 485
>gi|113867144|ref|YP_725633.1| microcin-processing peptidase 2 [Ralstonia eutropha H16]
gi|113525920|emb|CAJ92265.1| Microcin-processing peptidase 2 [Ralstonia eutropha H16]
Length = 486
Score = 669 bits (1727), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/478 (65%), Positives = 400/478 (83%)
Query: 259 IHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGN 318
I L A+ +LL P+ LDE L ++L ++F +KVDYAD YFQ+T+NE W LEEGIVK+G+
Sbjct: 8 IRNLATAQQLLLAPYGLDEAKLQRVLADIFTHKVDYADLYFQYTRNEAWSLEEGIVKSGS 67
Query: 319 FSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKIN 378
FSI+QGVGVRA+SGD+TAF YSDDIS L A +TR+I NG++K+ +
Sbjct: 68 FSIDQGVGVRAVSGDRTAFAYSDDISLAALSQAAAATRTIGRAGNGRVKVAGELATHAGR 127
Query: 379 SLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVA 438
+LY+ D + S++ EK+ LLERVE++AR KDPRV++V+A L+GEYDV+L+ R+DG+I A
Sbjct: 128 NLYAPNDPLDSMSAAEKVALLERVERMARAKDPRVVQVMAGLAGEYDVVLVARSDGVIAA 187
Query: 439 DIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKP 498
D+RPLV++ VT+I E GRRE+G+SG GGRY Y YFTD +L+K V +V+SAL+NL+A+P
Sbjct: 188 DVRPLVRVSVTVIAEHGGRREVGSSGGGGRYAYGYFTDELLQKYVDEAVSSALVNLDARP 247
Query: 499 APAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL 558
APAG M VVLGPGWPG+LLHEA+GHGLEGDFNRKGSSAF+ +G+R+A+K +T+VD+GTL
Sbjct: 248 APAGSMTVVLGPGWPGVLLHEAVGHGLEGDFNRKGSSAFAGRMGERVAAKGVTVVDDGTL 307
Query: 559 ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPR 618
ANRRGS+N+DDEGNPTQCTTLIE+GIL+GY+QD +NARLM M +TGNARRES+A +P+PR
Sbjct: 308 ANRRGSLNLDDEGNPTQCTTLIEDGILRGYIQDTLNARLMKMPVTGNARRESYAALPMPR 367
Query: 619 MTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPV 678
MTNTYMLNG P+EII+SVK GLYA NF GGQVDITNGKFVFSAS+AY+I++GKITYPV
Sbjct: 368 MTNTYMLNGDRDPQEIIASVKRGLYAVNFGGGQVDITNGKFVFSASEAYMIEDGKITYPV 427
Query: 679 KGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
KGATL+G+GP LK V+MIGNDM+LD GVGVCGK+GQ VPVGVGQPTL+I+++TVGGT
Sbjct: 428 KGATLVGNGPESLKDVTMIGNDMRLDSGVGVCGKEGQSVPVGVGQPTLRIENMTVGGT 485
>gi|344172299|emb|CCA84931.1| peptidase [Ralstonia syzygii R24]
Length = 486
Score = 669 bits (1727), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/478 (65%), Positives = 398/478 (83%)
Query: 259 IHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGN 318
I L++AR +LL+P+ LDE L + L ++F ++VDYAD YFQ+T+NE W LEEGIVK+G+
Sbjct: 8 IQNLSVARRVLLDPYGLDEAQLQRALADIFTHRVDYADLYFQYTRNEAWSLEEGIVKSGS 67
Query: 319 FSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKIN 378
FSI+QGVGVRA+SGD+TAF YSDDIS L+ A +TR+I G++K+ +++
Sbjct: 68 FSIDQGVGVRAVSGDRTAFAYSDDISLPALMQAAAATRTIGRAGAGRVKVAGSLQSQGGR 127
Query: 379 SLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVA 438
+LY+ D + S+ EK+ LLER+EK+AR KDPRV++V+A L+GEYDV+L+ R+DG+I A
Sbjct: 128 ALYAPNDPLDSMTASEKVALLERIEKLARAKDPRVVQVMAGLAGEYDVMLVARSDGVIAA 187
Query: 439 DIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKP 498
D+RPLV++ VT+I E+NGRRE+GNSG GGRY Y YFTD +L++ V +V+SAL+NLEAKP
Sbjct: 188 DVRPLVRVSVTVIAEQNGRREMGNSGGGGRYAYGYFTDDLLQQYVDEAVSSALVNLEAKP 247
Query: 499 APAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL 558
APAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAFS +G+R+A+K +T+VD+GTL
Sbjct: 248 APAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFSGRMGERVAAKGVTVVDDGTL 307
Query: 559 ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPR 618
NRRGS+N+DDEGNPTQ LIE+GIL GYMQD +NARLM M +TGNARRES+A +P+PR
Sbjct: 308 PNRRGSLNLDDEGNPTQYNPLIEDGILTGYMQDTLNARLMKMPVTGNARRESYASLPMPR 367
Query: 619 MTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPV 678
MTNTYML G P+EII+SVK GLYA NF GGQVDITNGKFVFSAS+AY+I++G+IT PV
Sbjct: 368 MTNTYMLGGDKDPQEIIASVKRGLYAANFGGGQVDITNGKFVFSASEAYLIEDGRITTPV 427
Query: 679 KGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
KGATL+G+GP LK V+MIGNDM+LD G+GVCGK+GQ VPVGVGQPTL+I+++TVGGT
Sbjct: 428 KGATLVGNGPESLKDVTMIGNDMRLDSGIGVCGKEGQSVPVGVGQPTLRIENMTVGGT 485
>gi|339325211|ref|YP_004684904.1| microcin-processing peptidase TldD [Cupriavidus necator N-1]
gi|338165368|gb|AEI76423.1| microcin-processing peptidase TldD [Cupriavidus necator N-1]
Length = 486
Score = 669 bits (1725), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/479 (65%), Positives = 399/479 (83%)
Query: 258 NIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTG 317
I L A+ +LL P+ LDE L ++L ++F +KVDYAD YFQ+T+NE W LEEGIVK+G
Sbjct: 7 GIRNLATAQQLLLAPYGLDEAKLQRVLADIFTHKVDYADLYFQYTRNEAWSLEEGIVKSG 66
Query: 318 NFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKI 377
+FSI+QGVGVRA+SGD+TAF YSDDIS L A +TR+I +G++K+ +
Sbjct: 67 SFSIDQGVGVRAVSGDRTAFAYSDDISLAALSQAAAATRTIGRAGSGRVKVAGELATHAG 126
Query: 378 NSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIV 437
+LY+ D + S++ EK+ LLERVE++AR KDPRV++V+A L+GEYDV+L+ R+DG+I
Sbjct: 127 RNLYTPNDPLDSMSAAEKVALLERVERMARAKDPRVVQVMAGLAGEYDVVLVARSDGVIA 186
Query: 438 ADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAK 497
AD+RPLV++ VT+I E GRRE+G+SG GGRY Y YFTD +L+K V +V+SAL+NL+A+
Sbjct: 187 ADVRPLVRVSVTVIAEHGGRREVGSSGGGGRYAYGYFTDELLQKYVDEAVSSALVNLDAR 246
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
PAPAG M VVLGPGWPG+LLHEA+GHGLEGDFNRKGSSAF+ +G+R+A+K +T+VD+GT
Sbjct: 247 PAPAGAMTVVLGPGWPGVLLHEAVGHGLEGDFNRKGSSAFAGRMGERVAAKGVTVVDDGT 306
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
LANRRGS+N+DDEGNPTQCTTLIE+GIL+GY+QD +NARLM M +TGNARRES+A +P+P
Sbjct: 307 LANRRGSLNLDDEGNPTQCTTLIEDGILRGYIQDTLNARLMKMPVTGNARRESYAALPMP 366
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNTYMLNG P+EII+SVK GLYA NF GGQVDITNGKFVFSAS+AY+I++GKITYP
Sbjct: 367 RMTNTYMLNGDRDPQEIIASVKRGLYAVNFGGGQVDITNGKFVFSASEAYMIEDGKITYP 426
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
VKGATL+G+GP LK V+MIGNDM+LD GVGVCGK+GQ VPVGVGQPTL+I+ +TVGGT
Sbjct: 427 VKGATLVGNGPESLKDVTMIGNDMRLDSGVGVCGKEGQSVPVGVGQPTLRIEDMTVGGT 485
>gi|350543692|ref|ZP_08913393.1| TldD protein, part of proposed TldE/TldD proteolytic complex (PMID
12029038) [Candidatus Burkholderia kirkii UZHbot1]
gi|350528536|emb|CCD35389.1| TldD protein, part of proposed TldE/TldD proteolytic complex (PMID
12029038) [Candidatus Burkholderia kirkii UZHbot1]
Length = 488
Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/485 (63%), Positives = 398/485 (82%), Gaps = 2/485 (0%)
Query: 254 ISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGI 313
I + I L A+ +LL P+ LDE ++ + ++F+++VDYAD YFQ T++E W LEEGI
Sbjct: 3 IIEPGIRNLVTAKDVLLTPYGLDEGLITRTFADIFEHRVDYADLYFQSTRSEAWSLEEGI 62
Query: 314 VKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKI--IKN 371
VK+G+FSI+QGVGVRA+SG++TAF YSDD+S ++ A +TR+IA GK KI
Sbjct: 63 VKSGSFSIDQGVGVRAVSGERTAFAYSDDLSPESIRQAAIATRAIAKAGGGKHKIEPAST 122
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ + LY D + S++ K+KLLERVE++AR KDPR+ +V+A ++GEYDV+L+ R
Sbjct: 123 LTGVSGRDLYLAADPLHSLDATAKVKLLERVEQMARAKDPRITQVMAGMAGEYDVVLVAR 182
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
+DG + AD+RPLV++ VT+I E+N RREIG G GGR++Y YFTD IL+K V+++V++AL
Sbjct: 183 SDGALAADVRPLVRVSVTVIAEQNSRREIGTGGGGGRFDYGYFTDAILQKYVNDAVHAAL 242
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
+NLEA+PAPAG M VVLGPGWPG+LLHEA+GHGLEGDFNRKGSSAF+ IG+++A+K++T
Sbjct: 243 VNLEARPAPAGAMTVVLGPGWPGVLLHEAVGHGLEGDFNRKGSSAFAGRIGEQVAAKDVT 302
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD+GTL NRRGS+NIDDEGNPTQCTTLIE+GILKGY+QD +NARLM M +TGNARRES+
Sbjct: 303 VVDDGTLPNRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDSLNARLMKMPVTGNARRESY 362
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A +P+PRMTNTYMLNG P+EI++SVKNGLYA NF GGQVDITNGKFVFSAS+AY+I+N
Sbjct: 363 AALPMPRMTNTYMLNGDKDPQEILASVKNGLYAVNFGGGQVDITNGKFVFSASEAYMIEN 422
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSI 731
GKITYPVKGATLIG GP LK V+MIGNDM LD GVGVCGK+GQ VPVGVGQPTL+++ +
Sbjct: 423 GKITYPVKGATLIGRGPESLKYVTMIGNDMSLDSGVGVCGKEGQSVPVGVGQPTLRVEKM 482
Query: 732 TVGGT 736
TVGGT
Sbjct: 483 TVGGT 487
>gi|394987827|ref|ZP_10380666.1| peptidase U62, modulator of DNA gyrase [Sulfuricella denitrificans
skB26]
gi|393793046|dbj|GAB70305.1| peptidase U62, modulator of DNA gyrase [Sulfuricella denitrificans
skB26]
Length = 487
Score = 666 bits (1719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/475 (65%), Positives = 382/475 (80%), Gaps = 2/475 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
A+S LL P+ LD L ++ G + ++VDYAD YFQ+T+ E W LEEG VK+G+FSI
Sbjct: 14 FGTAQSTLLTPYGLDVGDLQQVFGRIMTHQVDYADLYFQYTRAEGWSLEEGQVKSGSFSI 73
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QGVGVRA+SG+KTAF YSDDIS L A ++TR+IA Q G K + + LY
Sbjct: 74 DQGVGVRAVSGEKTAFAYSDDISLPALAAAAETTRAIARQ--GAEKSVPAVYGAAKPQLY 131
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
D I+S+ EK+ LLER+E+ AR D RV +V+A+L+GEY+V+LI RNDGL+ AD+R
Sbjct: 132 LPHDPIASLKDAEKVALLERLERHARALDKRVTQVMASLAGEYEVVLIARNDGLLAADVR 191
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPA 501
PLV++ + +IVE GRRE G++G GGR++Y YF+D +L+ +V+ ALINL+AKPAPA
Sbjct: 192 PLVRVSLQVIVEDGGRREQGSAGGGGRFDYTYFSDEVLQDYAQKAVHQALINLDAKPAPA 251
Query: 502 GIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANR 561
G M VVLG GWPGILLHEAIGHGLEGDFNRKGSSAFS IG+R+AS +T+VD+GT+A R
Sbjct: 252 GTMTVVLGSGWPGILLHEAIGHGLEGDFNRKGSSAFSGKIGQRVASAGVTVVDDGTIARR 311
Query: 562 RGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTN 621
RGS+N+DDEGNPTQCT LIENGILKGYMQD +NARLM M++TGNARRESFAHIP+PRMTN
Sbjct: 312 RGSLNVDDEGNPTQCTVLIENGILKGYMQDTLNARLMGMAVTGNARRESFAHIPMPRMTN 371
Query: 622 TYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGA 681
TYMLNG P EII SVK+GLYA NF GGQVDIT+GKFVFSA++AY+I++GKITYPVKGA
Sbjct: 372 TYMLNGDKDPAEIIKSVKHGLYAANFGGGQVDITSGKFVFSAAEAYMIEDGKITYPVKGA 431
Query: 682 TLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
TLIG+GP++L +VSMIGNDM LDPGVG CGKDGQ VPVGVGQPTL+ID +TVGGT
Sbjct: 432 TLIGNGPDVLTRVSMIGNDMALDPGVGTCGKDGQSVPVGVGQPTLRIDGLTVGGT 486
>gi|237747042|ref|ZP_04577522.1| microcin B17 maturation protein [Oxalobacter formigenes HOxBLS]
gi|229378393|gb|EEO28484.1| microcin B17 maturation protein [Oxalobacter formigenes HOxBLS]
Length = 486
Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/475 (65%), Positives = 401/475 (84%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L++A+S+LLEPF LDE+ L+K + +F ++VDYAD YFQFTKNE+W LEEGIVKTG+FSI
Sbjct: 11 LDLAKSLLLEPFGLDERALIKAMSVIFTHQVDYADLYFQFTKNESWSLEEGIVKTGSFSI 70
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVGVRA++G+KTAF YS+DIS +L +A ++TR+I + GK+K+ +I + + LY
Sbjct: 71 DKGVGVRAVAGEKTAFSYSEDISPVSLEDAARTTRTIGARGEGKVKLASSIVPVNNHFLY 130
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
D + +I+ EK+ LLERVEK+A+ DPR+++V+A L+GE+DV+L+ R+DG + AD+R
Sbjct: 131 VPDDPLQTISAAEKVALLERVEKLAKATDPRIVQVMAGLAGEFDVVLVVRSDGKLAADVR 190
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPA 501
PL++L VT+I E+NGRRE+G SG GGRY Y YFTD ++ K V + SAL+NLEA+PAPA
Sbjct: 191 PLIRLSVTVIAEENGRREMGTSGGGGRYGYAYFTDEVVRKYVHEATRSALVNLEARPAPA 250
Query: 502 GIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANR 561
G M VVLG GWPG+LLHEAIGHGLEGDFNRKGSSAFS +G+++A+ IT+VD+G++ANR
Sbjct: 251 GPMTVVLGAGWPGVLLHEAIGHGLEGDFNRKGSSAFSGRLGEKVAAGGITVVDDGSIANR 310
Query: 562 RGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTN 621
RGS+N+DDEGNPTQ T LIENG+LK Y+QD +NARLMNM +TGNARRESFAH+P+PRMTN
Sbjct: 311 RGSLNMDDEGNPTQRTVLIENGVLKAYLQDTLNARLMNMPVTGNARRESFAHLPMPRMTN 370
Query: 622 TYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGA 681
T+ML G P+EII+SVK GLYA NF GGQVDITNGKFVFSAS+AY+I+NGK+ YPVKGA
Sbjct: 371 TFMLAGNKDPQEIIASVKKGLYAANFGGGQVDITNGKFVFSASEAYVIENGKLAYPVKGA 430
Query: 682 TLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
TLIG+GP+ILK+VSMIGNDM+LD GVGVCGK+GQ VPVGVGQPTL+I+ +TVGGT
Sbjct: 431 TLIGNGPDILKRVSMIGNDMQLDSGVGVCGKEGQSVPVGVGQPTLRIEDVTVGGT 485
>gi|91781873|ref|YP_557079.1| microcin-processing peptidase 2 [Burkholderia xenovorans LB400]
gi|91685827|gb|ABE29027.1| microcin-processing peptidase 2, Unknown type peptidase, MEROPS
family U62 [Burkholderia xenovorans LB400]
Length = 488
Score = 659 bits (1701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/485 (65%), Positives = 397/485 (81%), Gaps = 2/485 (0%)
Query: 254 ISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGI 313
I + I L A+ ILL P+ LDE +L + L +F +K+DYAD YFQ+T++E W LEEGI
Sbjct: 3 IIEPGIRNLATAKDILLTPYGLDEALLTRTLAEIFTHKIDYADLYFQYTRSEAWSLEEGI 62
Query: 314 VKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGK--IKIIKN 371
VK+G+FSI+QGVGVRA+SGD+TAF YSDD+S + A +TRSIA GK IK+ +
Sbjct: 63 VKSGSFSIDQGVGVRAVSGDRTAFAYSDDLSPEAIRQAALATRSIARAGGGKQKIKVASS 122
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ I LY D + S++ K+KLLER+EK+AR +DPR+ +V+A L+GEYDV+L+ R
Sbjct: 123 LTGIAGRDLYLPADPLHSLDATAKVKLLERIEKMARGRDPRIQQVMAGLAGEYDVVLVAR 182
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
+DG ADIRPLV++ VT+I E+NGRREIG+ G GGR++Y YFTD +L V ++V++AL
Sbjct: 183 SDGGFAADIRPLVRVSVTVIAEQNGRREIGSGGGGGRFDYAYFTDEVLSGYVDDAVHAAL 242
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
+NLEA+PAPAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAF+ IG+++A++ +T
Sbjct: 243 VNLEARPAPAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRIGEQVAARGVT 302
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD+GTL NRRGS+NIDDEGNPTQCTTLIE+GILKGY+QD +NARLM M +TGNARRES+
Sbjct: 303 VVDDGTLPNRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDTLNARLMKMPVTGNARRESY 362
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A +P+PRMTNTYMLNG P+EII+SVKNGLYA NF GGQVDITNGKFVFSAS+AY+I++
Sbjct: 363 AALPMPRMTNTYMLNGDKDPQEIIASVKNGLYAVNFGGGQVDITNGKFVFSASEAYMIED 422
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSI 731
GK+TYPVKGATLIG GP LK VSMIGNDMKLD GVGVCGK+GQ VPVGVGQPTL+ID +
Sbjct: 423 GKVTYPVKGATLIGSGPESLKYVSMIGNDMKLDSGVGVCGKEGQSVPVGVGQPTLRIDRM 482
Query: 732 TVGGT 736
TVGGT
Sbjct: 483 TVGGT 487
>gi|385206834|ref|ZP_10033702.1| putative Zn-dependent protease-like protein [Burkholderia sp.
Ch1-1]
gi|385179172|gb|EIF28448.1| putative Zn-dependent protease-like protein [Burkholderia sp.
Ch1-1]
Length = 488
Score = 659 bits (1699), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/485 (65%), Positives = 397/485 (81%), Gaps = 2/485 (0%)
Query: 254 ISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGI 313
I + I L A+ ILL P+ LDE +L + L +F +K+DYAD YFQ+T++E W LEEGI
Sbjct: 3 IIEPGIRNLATAKDILLTPYGLDEALLTRTLAEIFTHKIDYADLYFQYTRSEAWSLEEGI 62
Query: 314 VKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGK--IKIIKN 371
VK+G+FSI+QGVGVRA+SGD+TAF YSDD+S + A +TRSIA GK IK+ +
Sbjct: 63 VKSGSFSIDQGVGVRAVSGDRTAFAYSDDLSPEAIRQAALATRSIAKAGGGKQKIKVASS 122
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ I LY D + S++ K+KLLER+EK+AR +DPR+ +V+A L+GEYDV+L+ R
Sbjct: 123 LTGIAGRDLYLPADPLHSLDATAKVKLLERIEKMARGRDPRIQQVMAGLAGEYDVVLVAR 182
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
+DG ADIRPLV++ VT+I E+NGRREIG+ G GGR++Y YFTD +L V ++V++AL
Sbjct: 183 SDGGFAADIRPLVRVSVTVIAEQNGRREIGSGGGGGRFDYAYFTDDVLSGYVDDAVHAAL 242
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
+NLEA+PAPAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAF+ IG+++A+K +T
Sbjct: 243 VNLEARPAPAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRIGEQVAAKGVT 302
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD+GTL NRRGS+NIDDEGNPTQCTTLIE+GILKGY+QD +NARLM M +TGNARRES+
Sbjct: 303 VVDDGTLPNRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDTLNARLMKMPVTGNARRESY 362
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A +P+PRMTNTYMLNG P+EII+SVKNGLYA NF GGQVDITNGKFVFSAS+AY+I++
Sbjct: 363 AALPMPRMTNTYMLNGDKDPQEIIASVKNGLYAVNFGGGQVDITNGKFVFSASEAYMIED 422
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSI 731
GK+TYPVKGATLIG GP LK VSMIGNDMKLD GVGVCGK+GQ VPVGVGQPTL+ID +
Sbjct: 423 GKVTYPVKGATLIGSGPESLKYVSMIGNDMKLDSGVGVCGKEGQSVPVGVGQPTLRIDRM 482
Query: 732 TVGGT 736
TVGGT
Sbjct: 483 TVGGT 487
>gi|209521477|ref|ZP_03270183.1| peptidase U62 modulator of DNA gyrase [Burkholderia sp. H160]
gi|209498083|gb|EDZ98232.1| peptidase U62 modulator of DNA gyrase [Burkholderia sp. H160]
Length = 488
Score = 657 bits (1695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/485 (65%), Positives = 398/485 (82%), Gaps = 2/485 (0%)
Query: 254 ISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGI 313
I + I L A+ ILL P+ LDE +L + L +F ++VDYAD YFQ T++E W LEEGI
Sbjct: 3 IIEPGIRNLAAAKDILLTPYGLDESLLTRTLAEIFTHRVDYADLYFQATRSEAWSLEEGI 62
Query: 314 VKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGK--IKIIKN 371
VK+G+FSI+QGVGVRA+SGD+TAF YSDD+S + A +TR+IA GK IK+ +
Sbjct: 63 VKSGSFSIDQGVGVRAVSGDRTAFAYSDDLSPEAIRQAAIATRAIAKAGGGKQKIKVASS 122
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ I LY +D + S++ K+KLLER+E++AR +DPR+ +V+A L+GEYDV+L+ R
Sbjct: 123 LTGIAGRDLYLPSDPLHSLDATAKVKLLERIEQMARGRDPRIQQVMAGLAGEYDVVLVAR 182
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
+DG ADIRPLV++ VT+I E+NGRREIG+ G GGR++Y YFTD +L + V ++V++AL
Sbjct: 183 SDGGFAADIRPLVRVSVTVIAEQNGRREIGSGGGGGRFDYGYFTDEVLSRYVDDAVHAAL 242
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
+NLEA+PAPAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAF+ IG+++A+K +T
Sbjct: 243 VNLEARPAPAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRIGEQVAAKGVT 302
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD+GTL NRRGS+NIDDEGNPTQCTTLIE+GILKGY+QD +NARLMNM ITGNARRES+
Sbjct: 303 VVDDGTLPNRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDSLNARLMNMPITGNARRESY 362
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A +P+PRMTNTYMLNG P+EI+ SVKNGLYA NF GGQVDITNGKFVFSAS+AY+I+N
Sbjct: 363 AALPMPRMTNTYMLNGDKDPQEILESVKNGLYAVNFGGGQVDITNGKFVFSASEAYMIEN 422
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSI 731
GKITYPVKGATLIG GP LK V+MIGNDMKLD GVGVCGK+GQ VPVGVGQPTL+I+ +
Sbjct: 423 GKITYPVKGATLIGSGPESLKYVTMIGNDMKLDSGVGVCGKEGQSVPVGVGQPTLRIERM 482
Query: 732 TVGGT 736
TVGGT
Sbjct: 483 TVGGT 487
>gi|82702184|ref|YP_411750.1| peptidase U62, modulator of DNA gyrase [Nitrosospira multiformis
ATCC 25196]
gi|82410249|gb|ABB74358.1| microcin-processing peptidase 2, Unknown type peptidase, MEROPS
family U62 [Nitrosospira multiformis ATCC 25196]
Length = 486
Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/472 (64%), Positives = 387/472 (81%), Gaps = 2/472 (0%)
Query: 265 ARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQG 324
A + LL P +LD L + G + +++DYAD YFQ+++ E W LEEGIVK+G+F+I+QG
Sbjct: 16 ANNCLLAPHELDATGLQNVFGQLLAHRIDYADLYFQYSRAEGWALEEGIVKSGSFNIDQG 75
Query: 325 VGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFT 384
VGVRA+SGDKTAF YSDDIS L++A ++TR+IA +G + ++ +K+ K LY
Sbjct: 76 VGVRAVSGDKTAFAYSDDISMPALVSAAQATRAIAR--HGVTQSVQVVKRSKGRELYLPE 133
Query: 385 DTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLV 444
D I+S+ +K+ LLE++E AR D RVI+V+A+LSGEY+V+L+ R+DGL+ AD+RPLV
Sbjct: 134 DPIASLKDTDKVALLEKLESYARALDKRVIQVMASLSGEYEVVLVARSDGLLAADVRPLV 193
Query: 445 QLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIM 504
+L + +I E+NG RE G +G GGR++Y YFTD +L + +V+ A++NL AKPAPAG M
Sbjct: 194 RLSLQVIAEENGNREQGVAGGGGRFDYAYFTDDVLRDYAAKAVHQAVVNLHAKPAPAGTM 253
Query: 505 KVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGS 564
VVLG GWPGILLHEAIGHGLEGDFNRKGSSAF+ IG+R+A+ +T+VD+GT+A RRGS
Sbjct: 254 TVVLGSGWPGILLHEAIGHGLEGDFNRKGSSAFAGRIGERVAAPGVTVVDDGTIARRRGS 313
Query: 565 INIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYM 624
+N+DDEGNPTQCT LIENGILKGY+QD +NARLMN+ +TGNARRESFAHIP+PRMTNTYM
Sbjct: 314 LNVDDEGNPTQCTMLIENGILKGYLQDSLNARLMNVPVTGNARRESFAHIPMPRMTNTYM 373
Query: 625 LNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLI 684
LNG PEEII+SVK+GLYA NF GGQVDIT+GKFVFSA++AY+I+NGKI+YPVKGATLI
Sbjct: 374 LNGDKTPEEIIASVKHGLYAVNFGGGQVDITSGKFVFSAAEAYMIENGKISYPVKGATLI 433
Query: 685 GHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
G+GP+IL +VSMIGND+ LDPGVG CGK+GQ VPVGVGQPTL+ID +TVGGT
Sbjct: 434 GNGPDILTRVSMIGNDLSLDPGVGTCGKEGQSVPVGVGQPTLRIDGLTVGGT 485
>gi|186477258|ref|YP_001858728.1| peptidase U62 modulator of DNA gyrase [Burkholderia phymatum
STM815]
gi|184193717|gb|ACC71682.1| peptidase U62 modulator of DNA gyrase [Burkholderia phymatum
STM815]
Length = 488
Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/485 (65%), Positives = 396/485 (81%), Gaps = 2/485 (0%)
Query: 254 ISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGI 313
I + +I L A+ +LL P+ LDE +L + L +F ++VDYAD YFQ T++E W LEEGI
Sbjct: 3 IIEPSIRNLATAKDVLLTPYGLDEAVLTRTLAEIFTHRVDYADLYFQTTRSEAWSLEEGI 62
Query: 314 VKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGK--IKIIKN 371
VK+G+FSI+QGVGVRA+SGD+TAF YSDD+S + A +TR+IA GK IK
Sbjct: 63 VKSGSFSIDQGVGVRAVSGDRTAFAYSDDLSPEAIRQAAIATRAIAKAGGGKQKIKAAST 122
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ + LY +D + S++ K+KLLER+E++AR +DPR+ +V+A L+GEYDV+L+ R
Sbjct: 123 LTGVSGRDLYLPSDPLHSLDATAKVKLLERIEQMARGRDPRITQVMAGLAGEYDVVLVAR 182
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
+DG + ADIRPLV++ VT+I E+NGRREIG+ G GGR++Y YF+D IL K V ++V++AL
Sbjct: 183 SDGALAADIRPLVRVSVTVIAEQNGRREIGSGGGGGRFDYGYFSDDILSKYVDDAVHAAL 242
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
+NL+A+PAPAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAF+ IG+++A+K +T
Sbjct: 243 VNLDARPAPAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRIGEQVAAKGVT 302
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD+GTL NRRGS+NIDDEGNPTQCTTLIE+GILKGY+QD +NARLM M +TGNARRES+
Sbjct: 303 VVDDGTLPNRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDTLNARLMKMPVTGNARRESY 362
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A +P+PRMTNTYMLNG P+EII SVKNGLYA NF GGQVDITNGKFVFSAS+AY+I+N
Sbjct: 363 AALPMPRMTNTYMLNGDKDPQEIIQSVKNGLYAVNFGGGQVDITNGKFVFSASEAYMIEN 422
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSI 731
GKITYPVKGATLIG GP LK VSMIGNDM LD GVGVCGK+GQ VPVGVGQPTL+ID +
Sbjct: 423 GKITYPVKGATLIGSGPESLKYVSMIGNDMSLDTGVGVCGKEGQSVPVGVGQPTLRIDKM 482
Query: 732 TVGGT 736
TVGGT
Sbjct: 483 TVGGT 487
>gi|329914124|ref|ZP_08276058.1| TldD protein [Oxalobacteraceae bacterium IMCC9480]
gi|327545207|gb|EGF30477.1| TldD protein [Oxalobacteraceae bacterium IMCC9480]
Length = 486
Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/479 (66%), Positives = 401/479 (83%)
Query: 258 NIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTG 317
N L +AR +LL PF LDE LLK +G MF ++VDYAD YFQ TK+E+W LEEGIVK+G
Sbjct: 7 NFSNLAVARDVLLTPFGLDEGKLLKAIGTMFTHRVDYADLYFQSTKSESWSLEEGIVKSG 66
Query: 318 NFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKI 377
+FSI+QGVGVRA+SGDKTAF YSD+IS+ L+ A +TR+IA Q GK+K+ +
Sbjct: 67 SFSIDQGVGVRAVSGDKTAFAYSDEISEAALLEAAAATRTIARQGAGKVKVAGTHQPSGG 126
Query: 378 NSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIV 437
+LY D + S+ +K++LLER+E++AR +DPR+++V+A L+ EYDV+L+ R+DG++
Sbjct: 127 RALYLPHDPLDSLEAADKVRLLERIERMARARDPRIVQVMAGLAAEYDVVLVLRSDGVLA 186
Query: 438 ADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAK 497
ADIRPLV+L VT+I E+NGRRE G++G GGR+ Y YFTD ILE + +V++AL+NL+A+
Sbjct: 187 ADIRPLVRLSVTVIAEQNGRRETGSAGGGGRFGYGYFTDAILESYATEAVDAALVNLDAR 246
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
PAPAG M VVLGPGWPGILLHEAIGHGLEGDFNRKGSS F+ IG+R+A+K +T+VD+GT
Sbjct: 247 PAPAGPMTVVLGPGWPGILLHEAIGHGLEGDFNRKGSSTFAGRIGERVAAKGVTVVDDGT 306
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
+ +RRGS+NIDDEGNPTQCTTLIE+GILKGY+QD MNARLM M +TGNARRESFAH+P+P
Sbjct: 307 ITDRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDTMNARLMKMPVTGNARRESFAHLPMP 366
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNTYML G P EI++SVK+GLYA NF GGQVDITNGKFVFSAS+AY+I++GK+TYP
Sbjct: 367 RMTNTYMLGGDKDPAEILASVKHGLYAVNFGGGQVDITNGKFVFSASEAYLIEDGKVTYP 426
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
VKGATLIG+GP++L +VSM+GNDM+LD GVGVCGKDGQ +PVGVGQPTL+ID +TVGGT
Sbjct: 427 VKGATLIGNGPDVLNRVSMVGNDMRLDSGVGVCGKDGQSLPVGVGQPTLRIDGVTVGGT 485
>gi|295675583|ref|YP_003604107.1| peptidase U62 modulator of DNA gyrase [Burkholderia sp. CCGE1002]
gi|295435426|gb|ADG14596.1| peptidase U62 modulator of DNA gyrase [Burkholderia sp. CCGE1002]
Length = 488
Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/485 (65%), Positives = 398/485 (82%), Gaps = 2/485 (0%)
Query: 254 ISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGI 313
I + I L A+ ILL P+ LDE +L + L +F ++VDYAD YFQ T++E W LEEGI
Sbjct: 3 IIEPGIRNLAAAKDILLTPYGLDESLLTRTLAEIFTHRVDYADLYFQTTRSEAWSLEEGI 62
Query: 314 VKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGK--IKIIKN 371
VK+G+FSI+QGVGVRA+SGD+TAF YSDD+S + A +TR+IA GK IK+ +
Sbjct: 63 VKSGSFSIDQGVGVRAVSGDRTAFAYSDDLSPEAIRQAAIATRAIAKAGGGKQKIKVASS 122
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ I LY +D + S++ K+KLLER+E++AR +DPR+ +V+A L+GEYDV+L+ R
Sbjct: 123 LTGIAGRDLYLPSDPLHSLDATAKVKLLERIEQMARGRDPRIQQVMAGLAGEYDVVLVAR 182
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
+DG ADIRPLV++ VT+I E+NGRREIG+ G GGR++Y YFTD +L + V ++V++AL
Sbjct: 183 SDGGFAADIRPLVRVSVTVIAEQNGRREIGSGGGGGRFDYGYFTDEVLSRYVDDAVHAAL 242
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
+NLEA+PAPAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAF+ IG+++A+K +T
Sbjct: 243 VNLEARPAPAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRIGEQVAAKGVT 302
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD+GTL NRRGS+NIDDEGNPTQCTTLIE+GILKGY+QD +NARLM M +TGNARRES+
Sbjct: 303 VVDDGTLPNRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDTLNARLMKMPVTGNARRESY 362
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A +P+PRMTNTYMLNG P+EI++SVKNGLYA NF GGQVDITNGKFVFSAS+AY+I+N
Sbjct: 363 AALPMPRMTNTYMLNGDKDPQEILASVKNGLYAVNFGGGQVDITNGKFVFSASEAYMIEN 422
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSI 731
GKITYPVKGATLIG GP LK ++MIGNDMKLD GVGVCGK+GQ VPVGVGQPTL+I+ +
Sbjct: 423 GKITYPVKGATLIGSGPESLKYITMIGNDMKLDSGVGVCGKEGQSVPVGVGQPTLRIEKM 482
Query: 732 TVGGT 736
TVGGT
Sbjct: 483 TVGGT 487
>gi|187922732|ref|YP_001894374.1| peptidase U62 modulator of DNA gyrase [Burkholderia phytofirmans
PsJN]
gi|187713926|gb|ACD15150.1| peptidase U62 modulator of DNA gyrase [Burkholderia phytofirmans
PsJN]
Length = 488
Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/485 (65%), Positives = 396/485 (81%), Gaps = 2/485 (0%)
Query: 254 ISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGI 313
I + I L A+ ILL P+ LDE +L + L +F +K+DYAD YFQ+T++E W LEEGI
Sbjct: 3 IIEPGIRNLATAKDILLTPYGLDEALLTRTLAEIFTHKIDYADLYFQYTRSEAWSLEEGI 62
Query: 314 VKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGK--IKIIKN 371
VK+G+FSI+QGVGVRA+SGD+TAF YSDD+S + A +TR+I GK IK+ +
Sbjct: 63 VKSGSFSIDQGVGVRAVSGDRTAFAYSDDLSPEAIRQAAIATRAIGKAGGGKQKIKVASS 122
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ I LY D + S++ K+KLLER+EK+AR +DPR+ +V+A L+GEYDV+L+ R
Sbjct: 123 LTGIAGRDLYLPADPLHSLDATAKVKLLERIEKMARGRDPRIQQVMAGLAGEYDVVLVAR 182
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
+DG ADIRPLV++ VT+I E+NGRREIG+ G GGR++Y YFTD IL V ++V++AL
Sbjct: 183 SDGGFAADIRPLVRVSVTVIAEQNGRREIGSGGGGGRFDYGYFTDEILSSYVDDAVHAAL 242
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
+NL+A+PAPAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAF+ IG+++A+K +T
Sbjct: 243 VNLDARPAPAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRIGEQVAAKGVT 302
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD+GTL NRRGS+NIDDEGNPTQCTTLIE+GILKGY+QD +NARLM M +TGNARRES+
Sbjct: 303 VVDDGTLPNRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDTLNARLMKMPVTGNARRESY 362
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A +P+PRMTNTYMLNG P+EI++SVKNGLYA NF GGQVDITNGKFVFSAS+AY+I+N
Sbjct: 363 AALPMPRMTNTYMLNGDKDPQEILASVKNGLYAVNFGGGQVDITNGKFVFSASEAYMIEN 422
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSI 731
GK+TYPVKGATLIG GP LK V+MIGNDMKLD GVGVCGK+GQ VPVGVGQPTL+I+ +
Sbjct: 423 GKVTYPVKGATLIGSGPESLKYVTMIGNDMKLDSGVGVCGKEGQSVPVGVGQPTLRIEKM 482
Query: 732 TVGGT 736
TVGGT
Sbjct: 483 TVGGT 487
>gi|413963608|ref|ZP_11402835.1| peptidase U62 modulator of DNA gyrase [Burkholderia sp. SJ98]
gi|413929440|gb|EKS68728.1| peptidase U62 modulator of DNA gyrase [Burkholderia sp. SJ98]
Length = 488
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/485 (64%), Positives = 396/485 (81%), Gaps = 2/485 (0%)
Query: 254 ISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGI 313
I + I L A+ +LL P+ LDE ++ + L +F ++VDYAD YFQ T++E W LEEGI
Sbjct: 3 IIEPGIRNLVTAKDVLLTPYGLDEGLITRTLAEIFTHRVDYADLYFQSTRSEAWSLEEGI 62
Query: 314 VKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGK--IKIIKN 371
VK+G+FSI+QGVGVRA+SG++TAF YSDD+S ++ A +TR+IA GK IK
Sbjct: 63 VKSGSFSIDQGVGVRAVSGERTAFAYSDDLSPESIRQAAIATRAIAKAGGGKHKIKPAST 122
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ + LY D + S++ K+KLLERVE++AR KDPR+ +V+A ++GEYDV+L+ R
Sbjct: 123 LTGVSGRDLYLAADPLHSLDATAKVKLLERVEQMARAKDPRITQVMAGMAGEYDVVLVAR 182
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
+DG + AD+RPLV++ VT+I E+NGRREIG G GGR++Y YFTD IL+K V ++V++AL
Sbjct: 183 SDGALAADVRPLVRVSVTVIAEQNGRREIGTGGGGGRFDYGYFTDAILQKYVDDAVHAAL 242
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
+NLEA+PAPAG M VVLGPGWPG+LLHEA+GHGLEGDFNRKGSSAF+ IG+++A+K +T
Sbjct: 243 VNLEARPAPAGAMTVVLGPGWPGVLLHEAVGHGLEGDFNRKGSSAFAGRIGEQVAAKGVT 302
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD+GTL NRRGS+NIDDEGNPTQCTTLIE+GILKGY+QD +NARLM M +TGNARRES+
Sbjct: 303 VVDDGTLPNRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDSLNARLMKMPVTGNARRESY 362
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A +P+PRMTNTYMLNG P+EI++SVKNGLYA NF GGQVDITNGKFVFSAS+AY+I+N
Sbjct: 363 AALPMPRMTNTYMLNGDKDPQEILASVKNGLYAVNFGGGQVDITNGKFVFSASEAYMIEN 422
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSI 731
GKITYPVKGATLIG GP LK V+MIGNDM LD GVGVCGK+GQ VPVGVGQPTL+I+ +
Sbjct: 423 GKITYPVKGATLIGSGPESLKYVTMIGNDMSLDSGVGVCGKEGQSVPVGVGQPTLRIEKM 482
Query: 732 TVGGT 736
TVGGT
Sbjct: 483 TVGGT 487
>gi|323524809|ref|YP_004226962.1| peptidase U62 [Burkholderia sp. CCGE1001]
gi|407712182|ref|YP_006832747.1| TldD protein [Burkholderia phenoliruptrix BR3459a]
gi|323381811|gb|ADX53902.1| peptidase U62 modulator of DNA gyrase [Burkholderia sp. CCGE1001]
gi|407234366|gb|AFT84565.1| TldD protein [Burkholderia phenoliruptrix BR3459a]
Length = 488
Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/485 (65%), Positives = 395/485 (81%), Gaps = 2/485 (0%)
Query: 254 ISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGI 313
I + I L A+ ILL P+ LDE +L + L +F ++VDYAD YFQ T++E W LEEGI
Sbjct: 3 IIEPGIRNLATAKDILLTPYGLDESLLTRTLAEIFTHRVDYADLYFQATRSEAWSLEEGI 62
Query: 314 VKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGK--IKIIKN 371
VK+G+FSI+QGVGVRA+SGD+TAF YSDD+S + A +TR+IA GK IK+ +
Sbjct: 63 VKSGSFSIDQGVGVRAVSGDRTAFAYSDDLSPEAIRQAAIATRAIAKAGGGKQKIKVASS 122
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ I LY D + S++ K+KLLER+E +AR +D R+ +V+A L+GEYDV+L+ R
Sbjct: 123 LTGIAGRDLYLPADPLHSLDATAKVKLLERIEHMARGRDRRIQQVMAGLAGEYDVVLVAR 182
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
+DG ADIRPLV++ VT+I E+NGRREIG+ G GGR++Y+YFTD +L + V ++V++AL
Sbjct: 183 SDGGFAADIRPLVRVSVTVIAEQNGRREIGSGGGGGRFDYSYFTDEVLSRYVDDAVHAAL 242
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
+NLEA+PAPAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAF+ IG+++A+K +T
Sbjct: 243 VNLEARPAPAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRIGEQVAAKGVT 302
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD+GTL NRRGS+NIDDEGNPTQCTTLIE+GILKGY+QD +NARLM M +TGNARRES+
Sbjct: 303 VVDDGTLPNRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDTLNARLMKMPVTGNARRESY 362
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A +P+PRMTNTYMLNG P+EII SVKNGLYA NF GGQVDITNGKFVFSAS+AY+I+N
Sbjct: 363 AALPMPRMTNTYMLNGDKDPQEIIESVKNGLYAVNFGGGQVDITNGKFVFSASEAYMIEN 422
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSI 731
GK+TYPVKGATLIG GP LK VSMIGNDMKLD GVGVCGK+GQ VPVGVGQPTL+ID +
Sbjct: 423 GKVTYPVKGATLIGSGPESLKYVSMIGNDMKLDSGVGVCGKEGQSVPVGVGQPTLRIDRM 482
Query: 732 TVGGT 736
TVGGT
Sbjct: 483 TVGGT 487
>gi|170691361|ref|ZP_02882526.1| peptidase U62 modulator of DNA gyrase [Burkholderia graminis C4D1M]
gi|170143566|gb|EDT11729.1| peptidase U62 modulator of DNA gyrase [Burkholderia graminis C4D1M]
Length = 488
Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/485 (65%), Positives = 395/485 (81%), Gaps = 2/485 (0%)
Query: 254 ISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGI 313
I + I L A+ ILL P+ LDE +L + L +F ++VDYAD YFQ T++E W LEEGI
Sbjct: 3 IIEPGIRNLATAKDILLTPYGLDESLLTRTLAEIFTHRVDYADLYFQATRSEAWSLEEGI 62
Query: 314 VKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGK--IKIIKN 371
VK+G+FSI+QGVGVRA+SGD+TAF YSDD+S + A +TR+IA GK IK+ +
Sbjct: 63 VKSGSFSIDQGVGVRAVSGDRTAFAYSDDLSPEAIRQAAIATRAIAKAGGGKQKIKVASS 122
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ I LY D + S++ K+KLLER+E +AR +D R+ +V+A L+GEYDV+L+ R
Sbjct: 123 LTGIAGRDLYLPADPLHSLDATAKVKLLERIEHMARGRDRRIQQVMAGLAGEYDVVLVAR 182
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
+DG ADIRPLV++ VT+I E+NGRREIG+ G GGR++Y+YFTD +L + V ++V++AL
Sbjct: 183 SDGGFAADIRPLVRVSVTVIAEQNGRREIGSGGGGGRFDYSYFTDEVLSRYVDDAVHAAL 242
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
+NLEA+PAPAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAF+ IG+++A+K +T
Sbjct: 243 VNLEARPAPAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRIGEQVAAKGVT 302
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD+GTL NRRGS+NIDDEGNPTQCTTLIE+GILKGY+QD +NARLM M +TGNARRES+
Sbjct: 303 VVDDGTLPNRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDTLNARLMKMPVTGNARRESY 362
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A +P+PRMTNTYMLNG P+EII SVKNGLYA NF GGQVDITNGKFVFSAS+AY+I++
Sbjct: 363 AALPMPRMTNTYMLNGDKDPQEIIQSVKNGLYAVNFGGGQVDITNGKFVFSASEAYMIED 422
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSI 731
GKITYPVKGATLIG GP LK VSMIGNDMKLD GVGVCGK+GQ VPVGVGQPTL+ID +
Sbjct: 423 GKITYPVKGATLIGSGPESLKYVSMIGNDMKLDSGVGVCGKEGQSVPVGVGQPTLRIDRM 482
Query: 732 TVGGT 736
TVGGT
Sbjct: 483 TVGGT 487
>gi|325982774|ref|YP_004295176.1| peptidase U62 modulator of DNA gyrase [Nitrosomonas sp. AL212]
gi|325532293|gb|ADZ27014.1| peptidase U62 modulator of DNA gyrase [Nitrosomonas sp. AL212]
Length = 491
Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/476 (64%), Positives = 388/476 (81%), Gaps = 2/476 (0%)
Query: 264 IARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQ 323
IA LL P+D+D L ++LG + +K+DYAD YFQ++++E W+LEEGIVK+G+F+I Q
Sbjct: 15 IADRCLLTPYDIDTAGLQRVLGQILTHKIDYADLYFQYSRSEGWMLEEGIVKSGSFNIEQ 74
Query: 324 GVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIK-NIKKIKINSLY 381
GVGVRAISG+KT F YSDDIS LI+A ++TR+IA+Q + +++ K N + LY
Sbjct: 75 GVGVRAISGEKTGFAYSDDISMPALISAAQATRAIADQGAMHSVQVAKHNGVMDRQTQLY 134
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
D I+S+ EK+ LLE++E+ R D RV +V+A+L+GEY+VIL+TR+DGL+ AD+R
Sbjct: 135 LPDDPIASLKDAEKVALLEKIERYTRQLDRRVTQVVASLAGEYEVILVTRSDGLLAADVR 194
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPA 501
PLV+L + +I E+NGRRE G +G GGR+NY YFTD IL+ +V+ A++NL+A+PAPA
Sbjct: 195 PLVRLSLQVIAEENGRREQGVAGGGGRFNYAYFTDEILQGYAQKAVHQAIVNLDARPAPA 254
Query: 502 GIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANR 561
G M VVLG GWPGILLHEAIGHGLEGDFNRKGSSAFS IG+R+A+ +T+VD+GT+ R
Sbjct: 255 GTMTVVLGSGWPGILLHEAIGHGLEGDFNRKGSSAFSGRIGERVAAPGVTVVDDGTIPRR 314
Query: 562 RGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTN 621
RGS+NIDDEGNPTQCT LIE+GILKGY+QD +NARLM+ +TGN RRESFAHIP+PRMTN
Sbjct: 315 RGSLNIDDEGNPTQCTVLIEDGILKGYLQDSLNARLMDSPVTGNGRRESFAHIPMPRMTN 374
Query: 622 TYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGA 681
TYMLNG P EII+SVK+GLYA NF GGQVDIT+GKFVFSA++AY+I++GKITYPVKGA
Sbjct: 375 TYMLNGDKDPAEIIASVKHGLYAANFGGGQVDITSGKFVFSAAEAYMIEDGKITYPVKGA 434
Query: 682 TLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
TLIG+GP++L +VSMIGNDM LDPGVG CGK+GQ VPVGVGQPTL+ID +TVGGT
Sbjct: 435 TLIGNGPDVLTRVSMIGNDMLLDPGVGTCGKEGQSVPVGVGQPTLRIDGLTVGGTG 490
>gi|307728522|ref|YP_003905746.1| peptidase U62 modulator of DNA gyrase [Burkholderia sp. CCGE1003]
gi|307583057|gb|ADN56455.1| peptidase U62 modulator of DNA gyrase [Burkholderia sp. CCGE1003]
Length = 488
Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/485 (65%), Positives = 395/485 (81%), Gaps = 2/485 (0%)
Query: 254 ISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGI 313
I + I L A+ ILL P+ LDE +L + L +F ++VDYAD YFQ T++E W LEEGI
Sbjct: 3 IIEPGIRNLATAKDILLAPYGLDESLLTRTLAEIFTHRVDYADLYFQATRSEAWSLEEGI 62
Query: 314 VKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGK--IKIIKN 371
VK+G+FSI+QGVGVRA+SGD+TAF YSDD+S + A +TR+IA GK IK+ +
Sbjct: 63 VKSGSFSIDQGVGVRAVSGDRTAFAYSDDLSPEAIRQAAIATRAIAKAGGGKQKIKVASS 122
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ I LY D + S++ K+KLLER+E +AR +D R+ +V+A L+GEYDV+L+ R
Sbjct: 123 LTGIAGRDLYLPADPLHSLDATAKVKLLERIEHMARGRDRRIQQVMAGLAGEYDVVLVAR 182
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
+DG ADIRPLV++ VT+I E+NGRRE+G+ G GGR++Y+YFTD +L + V ++V++AL
Sbjct: 183 SDGGFAADIRPLVRVSVTVIAEQNGRREVGSGGGGGRFDYSYFTDEVLSRYVDDAVHAAL 242
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
+NLEA+PAPAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAF+ IG+++A+K +T
Sbjct: 243 VNLEARPAPAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRIGEQVAAKGVT 302
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD+GTL NRRGS+NIDDEGNPTQCTTLIE+GILKGY+QD +NARLM M +TGNARRES+
Sbjct: 303 VVDDGTLPNRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDTLNARLMKMPVTGNARRESY 362
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A +P+PRMTNTYMLNG P+EII SVKNGLYA NF GGQVDITNGKFVFSAS+AY+I+N
Sbjct: 363 AALPMPRMTNTYMLNGDKDPQEIIESVKNGLYAVNFGGGQVDITNGKFVFSASEAYMIEN 422
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSI 731
GK+TYPVKGATLIG GP LK VSMIGNDMKLD GVGVCGK+GQ VPVGVGQPTL+ID +
Sbjct: 423 GKVTYPVKGATLIGSGPESLKFVSMIGNDMKLDSGVGVCGKEGQSVPVGVGQPTLRIDRM 482
Query: 732 TVGGT 736
TVGGT
Sbjct: 483 TVGGT 487
>gi|297538861|ref|YP_003674630.1| peptidase U62 modulator of DNA gyrase [Methylotenera versatilis
301]
gi|297258208|gb|ADI30053.1| peptidase U62 modulator of DNA gyrase [Methylotenera versatilis
301]
Length = 492
Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 302/475 (63%), Positives = 388/475 (81%), Gaps = 2/475 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
++A LL P LD L +LG+M +K+DYAD YFQ+++ E+W LEEG VK+GNFSI
Sbjct: 19 FDLATESLLAPASLDIAKLQNVLGDMMSHKIDYADLYFQYSRAESWGLEEGQVKSGNFSI 78
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QGVGVRA+SG+KTAF YSDDI+ + L A ++T++IA S G + ++ K + + LY
Sbjct: 79 DQGVGVRAVSGEKTAFAYSDDITLSALQEAARATKAIA--SLGSEQTANSVIKRQASQLY 136
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
D I+S++ K+KLLER+E IAR D R+ +V A+++GEY+V+++ R+DG++ AD+R
Sbjct: 137 LPQDPIASLSADAKVKLLERLEAIARSLDSRISQVTASIAGEYEVVMVARHDGVMAADVR 196
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPA 501
PLV+L + +I E NGRRE G+SG GGR++Y+YFTD IL++ +V+ A++NL+A+PAPA
Sbjct: 197 PLVRLSINVIAESNGRREQGSSGGGGRFDYSYFTDAILQEYAQKAVHQAIVNLDARPAPA 256
Query: 502 GIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANR 561
G M VVLG GWPGILLHEAIGHGLEGDFNRKGSSAFSN IG+++A+K ITIVD+GT+ NR
Sbjct: 257 GSMTVVLGAGWPGILLHEAIGHGLEGDFNRKGSSAFSNMIGQQVAAKGITIVDDGTIQNR 316
Query: 562 RGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTN 621
RGS+++DDEGN T T LIE+GIL+GY+QD +NARLMNM +TGNARRES+AHIP+PRMTN
Sbjct: 317 RGSLSMDDEGNQTNRTVLIEDGILRGYIQDTLNARLMNMPVTGNARRESYAHIPMPRMTN 376
Query: 622 TYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGA 681
TYMLNG PEEII SVK GLYA NF GGQVDIT+GKFVFSA++AY+I++GKITYPVKGA
Sbjct: 377 TYMLNGTLPPEEIIKSVKKGLYAANFGGGQVDITSGKFVFSAAEAYMIEDGKITYPVKGA 436
Query: 682 TLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
TLIG+GP +LK+VSMIGNDM LD GVG CGK+GQ VPVGVGQPTLKID++TVGGT
Sbjct: 437 TLIGNGPEVLKRVSMIGNDMSLDSGVGTCGKEGQSVPVGVGQPTLKIDALTVGGT 491
>gi|339482272|ref|YP_004694058.1| peptidase U62 modulator of DNA gyrase [Nitrosomonas sp. Is79A3]
gi|338804417|gb|AEJ00659.1| peptidase U62 modulator of DNA gyrase [Nitrosomonas sp. Is79A3]
Length = 490
Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/486 (61%), Positives = 392/486 (80%), Gaps = 3/486 (0%)
Query: 253 LISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEG 312
+I K+ + IA LL P+D+D L ++LG + + +DYAD YFQ++++E W+LEEG
Sbjct: 6 MIETKDFYA--IADRCLLSPYDIDAARLQQVLGQILTHNIDYADLYFQYSRSEGWMLEEG 63
Query: 313 IVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSN-GKIKIIKN 371
IVK+G+F+I QGVGVRAISG+KT F YSDDIS L++A ++TR+IANQ ++++K
Sbjct: 64 IVKSGSFNIEQGVGVRAISGEKTGFAYSDDISMPALVSAAQATRAIANQGGMHSVQVVKR 123
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
LY D I+S+ +K+ LLE++E+ R D RV +V+A+L+GEY+V+LITR
Sbjct: 124 NPMGLQTQLYLPEDPIASLKDADKVALLEKLERYTRKLDRRVTQVVASLAGEYEVVLITR 183
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
+DGL+ AD+RPLV+L + +I E+NGRRE G +G GGR++Y YFTD IL+ +V+ A+
Sbjct: 184 SDGLLAADVRPLVRLSLQVIAEENGRREQGVAGGGGRFSYAYFTDEILQDYAQKAVHQAV 243
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
+NL+A+PAPAG M VVLG GWPGILLHEAIGHGLEGDFNRKGSSAFS +G+R+A+ +T
Sbjct: 244 VNLDARPAPAGTMTVVLGSGWPGILLHEAIGHGLEGDFNRKGSSAFSGRVGERVAAPGVT 303
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD+GT+ RRGS+NIDDEGNPTQCT LIE+GIL+GY+QD +NARLM++ +TGN RRESF
Sbjct: 304 VVDDGTIPQRRGSLNIDDEGNPTQCTVLIEDGILRGYLQDSLNARLMDLPVTGNGRRESF 363
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
AHIP+PRMTNTYMLNG +P EII+SVK+GLYA NF GGQVDIT+GKFVFSA++AY+I++
Sbjct: 364 AHIPMPRMTNTYMLNGDKNPAEIIASVKHGLYAANFGGGQVDITSGKFVFSAAEAYMIED 423
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSI 731
GKITYPVKGATLIG+GP++L +VSMIGNDM LDPGVG CGK+GQ VPVGVGQPTL+ID +
Sbjct: 424 GKITYPVKGATLIGNGPDVLTRVSMIGNDMLLDPGVGTCGKEGQSVPVGVGQPTLRIDGL 483
Query: 732 TVGGTN 737
TVGGT
Sbjct: 484 TVGGTG 489
>gi|377819819|ref|YP_004976190.1| peptidase U62 modulator of DNA gyrase [Burkholderia sp. YI23]
gi|357934654|gb|AET88213.1| peptidase U62 modulator of DNA gyrase [Burkholderia sp. YI23]
Length = 488
Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/485 (64%), Positives = 395/485 (81%), Gaps = 2/485 (0%)
Query: 254 ISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGI 313
I + I L A+ +LL P+ LDE ++ + L +F ++VDYAD YFQ T++E W LEEGI
Sbjct: 3 IIEPGIRNLVTAKDVLLTPYGLDEALITRTLAEIFTHRVDYADLYFQSTRSEAWSLEEGI 62
Query: 314 VKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKI--IKN 371
VK+G+FSI+QGVGVRA+SG++TAF YSDD+S +++ A +TR+IA GK KI
Sbjct: 63 VKSGSFSIDQGVGVRAVSGERTAFAYSDDLSPDSIRQAAIATRAIAKAGGGKQKIKPAST 122
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ + LY D + S++ K+KLLERVE++AR KDPR+ +V+A L+GEYDV+L+ R
Sbjct: 123 LTGVSGRDLYLPADPLHSLDATAKVKLLERVEQMARGKDPRITQVMAGLAGEYDVVLVAR 182
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
+DG + AD+RPLV++ VT+I E+NGRREIG G GGR++Y YFTD +L K V ++V++AL
Sbjct: 183 SDGALAADVRPLVRVSVTVIAEQNGRREIGTGGGGGRFDYGYFTDAVLSKYVDDAVHAAL 242
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
+NLEA+PAPAG M VVLGPGWPG+LLHEA+GHGLEGDFNRKGSSAF+ IG+++A+K +T
Sbjct: 243 VNLEARPAPAGAMTVVLGPGWPGVLLHEAVGHGLEGDFNRKGSSAFAGMIGEQVAAKGVT 302
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD+GTL NRRGS+NIDDEGNPTQCTTLIE+GILKGY+QD +NARLM M +TGNARRES+
Sbjct: 303 VVDDGTLPNRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDSLNARLMKMPVTGNARRESY 362
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A +P+PRMTNTYMLNG P EI++SVKNGLYA NF GGQVDITNGKFVFSAS+AY+I+N
Sbjct: 363 AALPMPRMTNTYMLNGDKDPGEILASVKNGLYAVNFGGGQVDITNGKFVFSASEAYMIEN 422
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSI 731
GKITYPVKGATLIG GP LK V+MIGNDM LD GVGVCGK+GQ VPVGVGQPTL+I+ +
Sbjct: 423 GKITYPVKGATLIGSGPESLKYVTMIGNDMSLDSGVGVCGKEGQSVPVGVGQPTLRIEKM 482
Query: 732 TVGGT 736
TVGGT
Sbjct: 483 TVGGT 487
>gi|456064091|ref|YP_007503061.1| Peptidase U62 modulator of DNA gyrase [beta proteobacterium CB]
gi|455441388|gb|AGG34326.1| Peptidase U62 modulator of DNA gyrase [beta proteobacterium CB]
Length = 496
Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/481 (63%), Positives = 388/481 (80%), Gaps = 1/481 (0%)
Query: 256 QKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVK 315
+K L +A+SILLEP L E+ L GNMF +++D AD YFQ T++E+W LEEGIVK
Sbjct: 16 KKQADLLKLAKSILLEPTGLSEQDLHHTFGNMFTHQLDDADLYFQHTRSESWSLEEGIVK 75
Query: 316 TGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKI 375
+G+FSI+QGVGVRAI GDKTAF YSD+I+ L A KSTR I Q G + I
Sbjct: 76 SGSFSIDQGVGVRAIYGDKTAFAYSDEINLEALNKAAKSTRVIGPQ-GGTRAVASKIFTP 134
Query: 376 KINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGL 435
N LYS + + S+ +EKI LLE +E+ A+ +DPR+I+V+A+L+GE+DV+L+ R DGL
Sbjct: 135 VSNGLYSDLNPLDSLAPQEKIALLEGIERRAKARDPRIIQVMASLAGEFDVVLVVRADGL 194
Query: 436 IVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLE 495
+ AD+RPLV++ V +I E+NGRRE G+SG G R++Y+YF ++ + V +V+ ALINL+
Sbjct: 195 LAADVRPLVRVSVHVIAEQNGRRESGSSGGGARHDYHYFNTELINQYVDEAVDGALINLD 254
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
++PAPAG M VV+GPGWPG+LLHEA+GHGLEGDFNRKGSSAF+ CIG+R+A+K +T+VD+
Sbjct: 255 SRPAPAGPMTVVMGPGWPGVLLHEAVGHGLEGDFNRKGSSAFAGCIGQRVAAKGVTVVDD 314
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTL+ RRGS+NIDDEG PTQCTTLIE+GILKGY+QD +NARLMNM +TGN RRESFA +P
Sbjct: 315 GTLSGRRGSLNIDDEGTPTQCTTLIEDGILKGYIQDSLNARLMNMPLTGNGRRESFASLP 374
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EI++S+K GLYA NF GGQVDIT+GKFVFSAS+AY ++NGKI
Sbjct: 375 MPRMTNTYMLAGKDDPQEIVASIKRGLYAVNFGGGQVDITSGKFVFSASEAYWVENGKIQ 434
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
YPVKGAT+IG GP LK+VSMIGND+KLD G+GVCGK+GQ VPVGVGQPTL+IDS+TVGG
Sbjct: 435 YPVKGATIIGSGPESLKQVSMIGNDLKLDGGIGVCGKEGQSVPVGVGQPTLRIDSLTVGG 494
Query: 736 T 736
T
Sbjct: 495 T 495
>gi|421479477|ref|ZP_15927168.1| TldD/PmbA family protein [Burkholderia multivorans CF2]
gi|400222940|gb|EJO53285.1| TldD/PmbA family protein [Burkholderia multivorans CF2]
Length = 512
Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/504 (63%), Positives = 407/504 (80%), Gaps = 9/504 (1%)
Query: 235 DNKLPIPSTIINQVKNCILISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDY 294
DN L P T +N I + I L +A+ ILL P+ LDE +L + + ++F ++VDY
Sbjct: 15 DNFLRAPDTRMN-------IIEPGIRNLALAKDILLTPYGLDESLLTRTIADIFTHRVDY 67
Query: 295 ADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKS 354
AD YFQ T++E W LEEGIVK+G+FSI+QGVGVRA++GD+TAF YSDD+S + A +
Sbjct: 68 ADLYFQATRSEAWSLEEGIVKSGSFSIDQGVGVRAVAGDRTAFAYSDDLSPEAIAQAAAA 127
Query: 355 TRSIANQSNG--KIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPR 412
T++IA G K+K ++K I LY +D ++S++ K+KLLERVE++AR +DPR
Sbjct: 128 TKAIAAAGGGRQKVKAATSLKGISGRDLYLPSDPLASLDATAKVKLLERVEQMARSRDPR 187
Query: 413 VIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYN 472
+ +V+A L+GEYDV+L+ R+DG + ADIRPLV++ VT+I E+NGRREIG G GGR++Y
Sbjct: 188 ITQVMAGLAGEYDVVLVARSDGALAADIRPLVRVSVTVIAEQNGRREIGTGGGGGRFDYG 247
Query: 473 YFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRK 532
YFTD +L + V ++V++AL+NL+A+PAPAG M VVLGPGWPG+LLHEAIGHGLEGDFNRK
Sbjct: 248 YFTDDVLSRYVDDAVHAALVNLDARPAPAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRK 307
Query: 533 GSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDI 592
GSSAF+ IG+++A+K +T+VD+GTL NRRGS+NIDDEGNPTQCTTLIE+GILKGY+QD
Sbjct: 308 GSSAFAGRIGEQVAAKGVTVVDDGTLPNRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDT 367
Query: 593 MNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQV 652
+NARLM M +TGNARRES+A +P+PRMTNTYMLNG P+EII+SVKNGLYA NF GGQV
Sbjct: 368 LNARLMKMPVTGNARRESYAALPMPRMTNTYMLNGDKDPQEIIASVKNGLYAVNFGGGQV 427
Query: 653 DITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGK 712
DITNGKFVFSAS+AY+I+NGKITYPVKGATLIG GP LK VSMIGNDM LD GVGVCGK
Sbjct: 428 DITNGKFVFSASEAYMIENGKITYPVKGATLIGSGPESLKYVSMIGNDMSLDTGVGVCGK 487
Query: 713 DGQMVPVGVGQPTLKIDSITVGGT 736
+GQ VPVGVGQPTL+ID +TVGGT
Sbjct: 488 EGQSVPVGVGQPTLRIDKMTVGGT 511
>gi|253996786|ref|YP_003048850.1| peptidase U62 modulator of DNA gyrase [Methylotenera mobilis JLW8]
gi|253983465|gb|ACT48323.1| peptidase U62 modulator of DNA gyrase [Methylotenera mobilis JLW8]
Length = 512
Score = 648 bits (1672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/507 (61%), Positives = 398/507 (78%), Gaps = 7/507 (1%)
Query: 230 IQSVLDNKLPIPSTIINQVKNCILISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFK 289
I VL K P+ + Q N S K H + A LL P +LD L +L +M
Sbjct: 12 IYQVLFEKKPMKT----QEPNTNAQSIKGTH-FDAATEALLAPANLDVAKLQNVLADMMS 66
Query: 290 NKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLI 349
+++DYAD YFQ++++E+W LEEG VK+GNFSI+QGVGVRA+SG+KTAF YSDDI+ L+
Sbjct: 67 HQIDYADLYFQYSRSESWGLEEGQVKSGNFSIDQGVGVRAVSGEKTAFAYSDDINLKALL 126
Query: 350 NAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLK 409
A K+T+SI+ S G + I K + LY D I+S++ K+KLLE +E IAR
Sbjct: 127 EAAKATKSIS--SLGNEQTAGAIIKPQAPQLYLPHDPIASLSADAKVKLLEHLESIARKL 184
Query: 410 DPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRY 469
DPR+ +V A+++GEY+V+++ R+DG++ ADIRPLV++ + +I E NGRRE G++G GGR+
Sbjct: 185 DPRITQVTASIAGEYEVVMVARHDGVMAADIRPLVRVGINVIAESNGRREQGSAGGGGRF 244
Query: 470 NYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDF 529
+Y+YFTD +L + +V+ A++NL+A+PAPAG M VVLG GWPGILLHEAIGHGLEGDF
Sbjct: 245 DYSYFTDAVLHEYAQKAVHQAIVNLDARPAPAGSMTVVLGAGWPGILLHEAIGHGLEGDF 304
Query: 530 NRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYM 589
NRKGSSAFSN IG+++A+K ITIVD+GT+A+RRGS+++DDEGNPT T LIE+GIL+GY+
Sbjct: 305 NRKGSSAFSNMIGQQVAAKGITIVDDGTIADRRGSLSVDDEGNPTNKTVLIEDGILRGYI 364
Query: 590 QDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSG 649
QD +NARLMNM +TGNARRES+AH+P+PRMTNTYMLNG PEEII SVK GLYA NF G
Sbjct: 365 QDTLNARLMNMPLTGNARRESYAHVPMPRMTNTYMLNGTLPPEEIIKSVKKGLYAANFGG 424
Query: 650 GQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGV 709
GQVDIT+GKFVFSA++AY+I++GKITYPVKGATLIG+GP +LK+VSMIGNDM LD GVG
Sbjct: 425 GQVDITSGKFVFSAAEAYMIEDGKITYPVKGATLIGNGPEVLKRVSMIGNDMALDSGVGT 484
Query: 710 CGKDGQMVPVGVGQPTLKIDSITVGGT 736
CGK+GQ VPVGVGQPTLKID +TVGGT
Sbjct: 485 CGKEGQSVPVGVGQPTLKIDGLTVGGT 511
>gi|390567741|ref|ZP_10248059.1| peptidase U62 modulator of DNA gyrase [Burkholderia terrae BS001]
gi|420251789|ref|ZP_14754949.1| putative Zn-dependent protease-like protein [Burkholderia sp. BT03]
gi|389940295|gb|EIN02106.1| peptidase U62 modulator of DNA gyrase [Burkholderia terrae BS001]
gi|398057119|gb|EJL49095.1| putative Zn-dependent protease-like protein [Burkholderia sp. BT03]
Length = 488
Score = 648 bits (1672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/485 (65%), Positives = 397/485 (81%), Gaps = 2/485 (0%)
Query: 254 ISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGI 313
I + +I L A+ +LL P+ LDE +L + L +F ++VDYAD YFQ T++E W LEEGI
Sbjct: 3 IIEPSIRNLATAKDVLLTPYGLDEGVLTRTLAEIFTHRVDYADLYFQATRSEAWSLEEGI 62
Query: 314 VKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGK--IKIIKN 371
VK+G+FSI+QGVGVRA+SGD+TAF YSDD+S + A +TR+IA GK IK
Sbjct: 63 VKSGSFSIDQGVGVRAVSGDRTAFAYSDDLSPEAIRQAAIATRAIAKAGGGKQKIKAAST 122
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ + LY +D + S++ K+KLLER+E++AR +DPR+ +V+A L+GEYDV+L+ R
Sbjct: 123 LTGVSGRDLYLPSDPLHSLDATAKVKLLERIEQMARGRDPRITQVMAGLAGEYDVVLVAR 182
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
+DG + ADIRPLV++ VT+I E+NGRREIG+ G GGRY+Y YFTD +L K V ++V++AL
Sbjct: 183 SDGALAADIRPLVRVSVTVIAEQNGRREIGSGGGGGRYDYGYFTDELLSKYVDDAVHAAL 242
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
+NL+A+PAPAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAF+ IG+++A+K +T
Sbjct: 243 VNLDARPAPAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRIGEQVAAKGVT 302
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD+GTL NRRGS+NIDDEGNPTQCTTLIE+GILKGY+QD +NARLM M +TGNARRES+
Sbjct: 303 VVDDGTLPNRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDTLNARLMKMPVTGNARRESY 362
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A +P+PRMTNTYMLNG P+EII+SVKNGLYA NF GGQVDITNGKFVFSAS+AY+I+N
Sbjct: 363 AALPMPRMTNTYMLNGDKDPQEIIASVKNGLYAVNFGGGQVDITNGKFVFSASEAYMIEN 422
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSI 731
GKITYPVKGATLIG GP LK VSMIGNDM LD GVGVCGK+GQ VPVGVGQPTL+ID +
Sbjct: 423 GKITYPVKGATLIGSGPESLKYVSMIGNDMSLDTGVGVCGKEGQSVPVGVGQPTLRIDKM 482
Query: 732 TVGGT 736
TVGGT
Sbjct: 483 TVGGT 487
>gi|78065303|ref|YP_368072.1| microcin-processing peptidase 2 [Burkholderia sp. 383]
gi|77966048|gb|ABB07428.1| microcin-processing peptidase 2, Unknown type peptidase, MEROPS
family U62 [Burkholderia sp. 383]
Length = 488
Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/485 (65%), Positives = 401/485 (82%), Gaps = 2/485 (0%)
Query: 254 ISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGI 313
I + I L +A+ ILL P+ LDE +L + + ++F ++VDYAD YFQ T++E W LEEGI
Sbjct: 3 IIEPGIRNLALAKDILLTPYGLDESLLTRTIADIFTHRVDYADLYFQATRSEAWSLEEGI 62
Query: 314 VKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNG--KIKIIKN 371
VK+G+FSI+QGVGVRA++GD+TAF YSDD+S + A +T++IA G KIK +
Sbjct: 63 VKSGSFSIDQGVGVRAVAGDRTAFAYSDDLSPEAIAQAAAATKAIAAAGGGRQKIKAATS 122
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+K I LY +D ++S++ K+KLLER+E++AR +DPR+ +V+A L+GEYDV+L+ R
Sbjct: 123 LKGISGRDLYLPSDPLASLDATAKVKLLERIEQMARGRDPRITQVMAGLAGEYDVVLVAR 182
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
+DG + ADIRPLV++ VT+I E+NGRREIG+ G GGR++Y YFTD +L + V ++V++AL
Sbjct: 183 SDGALAADIRPLVRVSVTVIAEQNGRREIGSGGGGGRFDYGYFTDDVLSRYVDDAVHAAL 242
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
+NL+A+PAPAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAF+ IG+R+A+K +T
Sbjct: 243 VNLDARPAPAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRIGERVAAKGVT 302
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD+GTL NRRGS+NIDDEGNPTQCTTLIE+GILKGY+QD +NARLM M +TGNARRES+
Sbjct: 303 VVDDGTLPNRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDTLNARLMKMPVTGNARRESY 362
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A +P+PRMTNTYMLNG P+EII+SVKNGLYA NF GGQVDITNGKFVFSAS+AY+I+N
Sbjct: 363 AALPMPRMTNTYMLNGDKDPQEIIASVKNGLYAVNFGGGQVDITNGKFVFSASEAYMIEN 422
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSI 731
GK+TYPVKGATLIG GP LK VSMIGNDM LD GVGVCGK+GQ VPVGVGQPTL+ID +
Sbjct: 423 GKVTYPVKGATLIGSGPESLKDVSMIGNDMSLDSGVGVCGKEGQSVPVGVGQPTLRIDRM 482
Query: 732 TVGGT 736
TVGGT
Sbjct: 483 TVGGT 487
>gi|302879255|ref|YP_003847819.1| peptidase U62 modulator of DNA gyrase [Gallionella
capsiferriformans ES-2]
gi|302582044|gb|ADL56055.1| peptidase U62 modulator of DNA gyrase [Gallionella
capsiferriformans ES-2]
Length = 484
Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 300/472 (63%), Positives = 388/472 (82%), Gaps = 2/472 (0%)
Query: 265 ARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQG 324
A+ ILL P+ ++ + ++ +M +++DYAD YFQ+++ E+W LEEGIVK+G+FSI+QG
Sbjct: 14 AQKILLAPYLIETLQIEQVFNSMLAHRLDYADLYFQYSRAESWSLEEGIVKSGSFSIDQG 73
Query: 325 VGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFT 384
VGVRA+SG+KTAF YSDDIS N L +A +TR+IA S+G + + I K +Y
Sbjct: 74 VGVRAVSGEKTAFAYSDDISLNALQSAANATRAIA--SSGGTQTVPMIHKGSRRDIYLPN 131
Query: 385 DTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLV 444
D I+S+ +K+ LLER+E AR DPRV++V+A LSGEY+V+++ R+DGL+ ADIRPLV
Sbjct: 132 DPIASLKDADKVALLERIEGYARALDPRVVQVMAGLSGEYEVVMVARSDGLMNADIRPLV 191
Query: 445 QLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIM 504
+L +T+I+E NGRRE G++G GGR++Y YFTD +L K + +V+ A INL+A PAPAG M
Sbjct: 192 RLSITVIIESNGRREQGSAGGGGRFSYAYFTDEVLRKYAALAVHQASINLDAAPAPAGNM 251
Query: 505 KVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGS 564
VVLG GWPGILLHEAIGHGLEGDFNRKGSSAFS IG+R+AS+ +T+VD+GTL++RRGS
Sbjct: 252 TVVLGNGWPGILLHEAIGHGLEGDFNRKGSSAFSGRIGERVASEGVTVVDDGTLSDRRGS 311
Query: 565 INIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYM 624
+ +DDEGN TQCTTLIENGILKGY+QD +NARLM + +TGNARRES+AHIP+PRMTNTYM
Sbjct: 312 MQMDDEGNATQCTTLIENGILKGYLQDTLNARLMGVPVTGNARRESYAHIPMPRMTNTYM 371
Query: 625 LNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLI 684
L G P EII+SVK+GLYA NF+GGQVDIT+GKFVFS ++AY+I++GKITYPVKGATLI
Sbjct: 372 LGGDKDPAEIIASVKHGLYAVNFAGGQVDITSGKFVFSTAEAYMIEDGKITYPVKGATLI 431
Query: 685 GHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
G+GP++L ++SMIGNDM LDPGVG CGK+GQ VPVGVGQPT++ID +TVGGT
Sbjct: 432 GNGPDVLTRISMIGNDMALDPGVGTCGKEGQSVPVGVGQPTVRIDGLTVGGT 483
>gi|167571139|ref|ZP_02364013.1| peptidase U62 modulator of DNA gyrase [Burkholderia oklahomensis
C6786]
Length = 489
Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/485 (64%), Positives = 405/485 (83%), Gaps = 2/485 (0%)
Query: 254 ISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGI 313
I + I L +A+ +LL P+ LDE +L + L ++F ++VDYAD YFQ T++E W LEEGI
Sbjct: 3 IIEPGIRNLALAKDVLLTPYGLDETLLTRTLADIFTHRVDYADLYFQATRSEAWSLEEGI 62
Query: 314 VKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGK--IKIIKN 371
VK+G+FSI+QGVGVRA++GD+TAF YSDD+S + ++ A +T++IA GK I+ +
Sbjct: 63 VKSGSFSIDQGVGVRAVAGDRTAFAYSDDLSSDAILQAAAATKAIAAAGGGKQRIRAASS 122
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+K+I LY +D ++S++ K+KLLERVE++AR +DPR+ +V+A L+GEYDV+L+ R
Sbjct: 123 LKRISGRDLYLPSDPLASLDATAKVKLLERVEQMARGRDPRITQVMAGLAGEYDVVLVAR 182
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
+DG + ADIRPLV++ VT+I E+NGRREIG+ G GGR++Y YFTD +L + V ++V++AL
Sbjct: 183 SDGALAADIRPLVRVSVTVIAEQNGRREIGSGGGGGRFDYGYFTDDVLSRYVDDAVHAAL 242
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
+NL+A+PAPAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAF+ IG+++A+K +T
Sbjct: 243 VNLDARPAPAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRIGEQVAAKGVT 302
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD+GTL NRRGS+NIDDEGNPTQCTTLIE+G+LKGY+QD +NARLM M +TGNARRES+
Sbjct: 303 VVDDGTLPNRRGSLNIDDEGNPTQCTTLIEDGVLKGYIQDTLNARLMKMPVTGNARRESY 362
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A +P+PRMTNTYMLNG P+EII SVK+GLYA NF GGQVDITNGKFVFSAS+AY+I+N
Sbjct: 363 AALPMPRMTNTYMLNGDKDPQEIIESVKHGLYAVNFGGGQVDITNGKFVFSASEAYMIEN 422
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSI 731
GK+TYPVKGATLIG GP LK VSMIGNDMKLD GVGVCGK+GQ VPVGVGQPTL++D++
Sbjct: 423 GKVTYPVKGATLIGSGPESLKYVSMIGNDMKLDTGVGVCGKEGQSVPVGVGQPTLRLDNM 482
Query: 732 TVGGT 736
TVGGT
Sbjct: 483 TVGGT 487
>gi|161525814|ref|YP_001580826.1| peptidase U62 modulator of DNA gyrase [Burkholderia multivorans
ATCC 17616]
gi|189349465|ref|YP_001945093.1| TldD protein [Burkholderia multivorans ATCC 17616]
gi|221202238|ref|ZP_03575272.1| peptidase U62, modulator of DNA gyrase [Burkholderia multivorans
CGD2M]
gi|221209173|ref|ZP_03582166.1| peptidase U62, modulator of DNA gyrase [Burkholderia multivorans
CGD2]
gi|421467699|ref|ZP_15916297.1| TldD/PmbA family protein [Burkholderia multivorans ATCC BAA-247]
gi|160343243|gb|ABX16329.1| peptidase U62 modulator of DNA gyrase [Burkholderia multivorans
ATCC 17616]
gi|189333487|dbj|BAG42557.1| TldD protein [Burkholderia multivorans ATCC 17616]
gi|221170991|gb|EEE03445.1| peptidase U62, modulator of DNA gyrase [Burkholderia multivorans
CGD2]
gi|221177812|gb|EEE10225.1| peptidase U62, modulator of DNA gyrase [Burkholderia multivorans
CGD2M]
gi|400233414|gb|EJO62964.1| TldD/PmbA family protein [Burkholderia multivorans ATCC BAA-247]
Length = 488
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/485 (65%), Positives = 400/485 (82%), Gaps = 2/485 (0%)
Query: 254 ISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGI 313
I + I L +A+ ILL P+ LDE +L + + ++F ++VDYAD YFQ T++E W LEEGI
Sbjct: 3 IIEPGIRNLALAKDILLTPYGLDESLLTRTIADIFTHRVDYADLYFQATRSEAWSLEEGI 62
Query: 314 VKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNG--KIKIIKN 371
VK+G+FSI+QGVGVRA++GD+TAF YSDD+S + A +T++IA G K+K +
Sbjct: 63 VKSGSFSIDQGVGVRAVAGDRTAFAYSDDLSPEAIAQAAAATKAIAAAGGGRQKVKAATS 122
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+K I LY +D ++S++ K+KLLERVE++AR +DPR+ +V+A L+GEYDV+L+ R
Sbjct: 123 LKGISGRDLYLPSDPLASLDATAKVKLLERVEQMARSRDPRITQVMAGLAGEYDVVLVAR 182
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
+DG + ADIRPLV++ VT+I E+NGRREIG G GGR++Y YFTD +L + V ++V++AL
Sbjct: 183 SDGALAADIRPLVRVSVTVIAEQNGRREIGTGGGGGRFDYGYFTDDVLSRYVDDAVHAAL 242
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
+NL+A+PAPAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAF+ IG+++A+K +T
Sbjct: 243 VNLDARPAPAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRIGEQVAAKGVT 302
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD+GTL NRRGS+NIDDEGNPTQCTTLIE+GILKGY+QD +NARLM M +TGNARRES+
Sbjct: 303 VVDDGTLPNRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDTLNARLMKMPVTGNARRESY 362
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A +P+PRMTNTYMLNG P+EII+SVKNGLYA NF GGQVDITNGKFVFSAS+AY+I+N
Sbjct: 363 AALPMPRMTNTYMLNGDKDPQEIIASVKNGLYAVNFGGGQVDITNGKFVFSASEAYMIEN 422
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSI 731
GKITYPVKGATLIG GP LK VSMIGNDM LD GVGVCGK+GQ VPVGVGQPTL+ID +
Sbjct: 423 GKITYPVKGATLIGSGPESLKYVSMIGNDMSLDTGVGVCGKEGQSVPVGVGQPTLRIDKM 482
Query: 732 TVGGT 736
TVGGT
Sbjct: 483 TVGGT 487
>gi|330815607|ref|YP_004359312.1| Peptidase U62, modulator of DNA gyrase [Burkholderia gladioli BSR3]
gi|327368000|gb|AEA59356.1| Peptidase U62, modulator of DNA gyrase [Burkholderia gladioli BSR3]
Length = 488
Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/485 (64%), Positives = 402/485 (82%), Gaps = 2/485 (0%)
Query: 254 ISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGI 313
I + I L +A+ ILL P+ LDE +L + L ++F ++VDYAD YFQ T++E W LEEGI
Sbjct: 3 IIEPGIRNLALAKDILLTPYGLDESLLTRTLADIFTHRVDYADLYFQATRSEAWSLEEGI 62
Query: 314 VKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNG--KIKIIKN 371
VK+G+FSI+QGVGVRA++GD+TAF YSDD+S + A +T++IA G KI++ +
Sbjct: 63 VKSGSFSIDQGVGVRAVAGDRTAFAYSDDLSPEAIRQAASATKAIAAAGGGRRKIQVASS 122
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ + LY +D ++S++ K+KLLER+E++AR +DPR+ +V+A L+GEYDV+L+ R
Sbjct: 123 LTGVSGRDLYLPSDPLASLDATAKVKLLERIEQMARGRDPRITQVMAGLAGEYDVVLVAR 182
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
+DG + ADIRPLV++ VT+I E+NGRREIG+ G GGR++Y YF+D +L K V ++V++AL
Sbjct: 183 SDGALAADIRPLVRVSVTVIAEQNGRREIGSGGGGGRFDYGYFSDEVLSKYVDDAVHAAL 242
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
+NL+A+PAPAG M VVLG GWPG+LLHEAIGHGLEGDFNRKGSSAF+ IG+++A+K +T
Sbjct: 243 VNLDARPAPAGAMTVVLGSGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRIGEQVAAKGVT 302
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD+GTL NRRGS+NIDDEGNPTQCTTLIE+GILKGY+QD +NARLM M +TGNARRES+
Sbjct: 303 VVDDGTLPNRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDTLNARLMKMPVTGNARRESY 362
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A +P+PRMTNTYMLNG P+EII+SVKNGLYA NF GGQVDITNGKFVFSAS+AY+I+N
Sbjct: 363 AALPMPRMTNTYMLNGDKDPQEIIASVKNGLYAVNFGGGQVDITNGKFVFSASEAYMIEN 422
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSI 731
GKITYPVKGATLIG GP LK VSMIGNDMKLD GVGVCGK+GQ VPVGVGQPTL+IDS+
Sbjct: 423 GKITYPVKGATLIGSGPESLKYVSMIGNDMKLDSGVGVCGKEGQSVPVGVGQPTLRIDSM 482
Query: 732 TVGGT 736
TVGGT
Sbjct: 483 TVGGT 487
>gi|402567532|ref|YP_006616877.1| DNA gyrase control protein [Burkholderia cepacia GG4]
gi|402248729|gb|AFQ49183.1| putative DNA gyrase control protein [Burkholderia cepacia GG4]
Length = 488
Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/485 (65%), Positives = 401/485 (82%), Gaps = 2/485 (0%)
Query: 254 ISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGI 313
I + I L +A+ ILL P+ LDE +L + + ++F ++VDYAD YFQ T++E W LEEGI
Sbjct: 3 IIEPGIRNLALAKDILLTPYGLDESLLTRTIADIFTHRVDYADLYFQATRSEAWSLEEGI 62
Query: 314 VKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNG--KIKIIKN 371
VK+G+FSI+QGVGVRA++GD+TAF YSDD+S + A +T++IA G KIK +
Sbjct: 63 VKSGSFSIDQGVGVRAVAGDRTAFAYSDDLSPEAIAQAAAATKAIAAAGGGRQKIKAATS 122
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+K I LY +D ++S++ K+KLLER+E++AR +DPR+ +V+A L+GEYDV+L+ R
Sbjct: 123 LKGISGRDLYLPSDPLASLDATAKVKLLERIEQMARGRDPRITQVMAGLAGEYDVVLVAR 182
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
+DG + ADIRPLV++ VT+I E+NGRREIG+ G GGR++Y YFTD IL + V ++V++AL
Sbjct: 183 SDGALAADIRPLVRVSVTVIAEQNGRREIGSGGGGGRFDYGYFTDDILSRYVDDAVHAAL 242
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
+NL+A+PAPAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAF+ IG+++A+K +T
Sbjct: 243 VNLDARPAPAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRIGEQVAAKGVT 302
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD+GTL NRRGS+NIDDEGNPTQCTTLIE+GILKGY+QD +NARLM M +TGNARRES+
Sbjct: 303 VVDDGTLPNRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDTLNARLMKMPVTGNARRESY 362
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A +P+PRMTNTYMLNG P+EII+SVKNGLYA NF GGQVDITNGKFVFSAS+AY+I+N
Sbjct: 363 AALPMPRMTNTYMLNGDKDPQEIIASVKNGLYAVNFGGGQVDITNGKFVFSASEAYMIEN 422
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSI 731
GKITYPVKGATLIG GP LK VSMIGNDM LD GVGVCGK+GQ VPVGVGQPTL+ID +
Sbjct: 423 GKITYPVKGATLIGSGPESLKYVSMIGNDMSLDSGVGVCGKEGQSVPVGVGQPTLRIDKM 482
Query: 732 TVGGT 736
TVGGT
Sbjct: 483 TVGGT 487
>gi|134294812|ref|YP_001118547.1| microcin-processing peptidase 2 [Burkholderia vietnamiensis G4]
gi|387901407|ref|YP_006331746.1| protein TldD [Burkholderia sp. KJ006]
gi|134137969|gb|ABO53712.1| microcin-processing peptidase 2, Unknown type peptidase, MEROPS
family U62 [Burkholderia vietnamiensis G4]
gi|387576299|gb|AFJ85015.1| TldD [Burkholderia sp. KJ006]
Length = 488
Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/485 (65%), Positives = 401/485 (82%), Gaps = 2/485 (0%)
Query: 254 ISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGI 313
I + I L +A+ ILL P+ LDE +L + + ++F ++VDYAD YFQ T++E W LEEGI
Sbjct: 3 IIEPGIRNLALAKDILLTPYGLDESLLTRTIADIFTHRVDYADLYFQATRSEAWSLEEGI 62
Query: 314 VKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNG--KIKIIKN 371
VK+G+FSI+QGVGVRA++GD+TAF YSDD+S + A +T++IA G KIK +
Sbjct: 63 VKSGSFSIDQGVGVRAVAGDRTAFAYSDDLSPEAIAQAAAATKAIAAAGGGRQKIKAATS 122
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+K I LY +D ++S++ K+KLLER+E++AR +DPRV +V+A L+GEYDV+L+ R
Sbjct: 123 LKGITGRDLYLPSDPLASLDATAKVKLLERIEQMARGRDPRVTQVMAGLAGEYDVVLVAR 182
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
+DG + ADIRPLV++ VT+I E+NGRREIG+ G GGR++Y YFTD +L + V ++V++AL
Sbjct: 183 SDGALAADIRPLVRVSVTVIAEQNGRREIGSGGGGGRFDYAYFTDDVLSRYVDDAVHAAL 242
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
+NL+A+PAPAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAF+ IG+++A+K +T
Sbjct: 243 VNLDARPAPAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRIGEQVAAKGVT 302
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD+GTL NRRGS+NIDDEGNPTQCTTLIE+GILKGY+QD +NARLM M +TGNARRES+
Sbjct: 303 VVDDGTLPNRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDTLNARLMKMPVTGNARRESY 362
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A +P+PRMTNTYMLNG P+EII+SVKNGLYA NF GGQVDITNGKFVFSAS+AY+I+N
Sbjct: 363 AALPMPRMTNTYMLNGDKDPQEIIASVKNGLYAVNFGGGQVDITNGKFVFSASEAYMIEN 422
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSI 731
GK+TYPVKGATLIG GP LK VSMIGNDM LD GVGVCGK+GQ VPVGVGQPTL+ID +
Sbjct: 423 GKVTYPVKGATLIGSGPESLKYVSMIGNDMSLDSGVGVCGKEGQSVPVGVGQPTLRIDKM 482
Query: 732 TVGGT 736
TVGGT
Sbjct: 483 TVGGT 487
>gi|221214441|ref|ZP_03587412.1| peptidase U62, modulator of DNA gyrase [Burkholderia multivorans
CGD1]
gi|221165698|gb|EED98173.1| peptidase U62, modulator of DNA gyrase [Burkholderia multivorans
CGD1]
Length = 488
Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/485 (64%), Positives = 400/485 (82%), Gaps = 2/485 (0%)
Query: 254 ISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGI 313
I + I L +A+ ILL P+ LDE +L + + ++F ++VDYAD YFQ T++E W LEEGI
Sbjct: 3 IIEPGIRNLALAKDILLTPYGLDESLLTRTIADIFTHRVDYADLYFQATRSEAWSLEEGI 62
Query: 314 VKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNG--KIKIIKN 371
VK+G+FSI+QGVGVRA++GD+TAF YSDD+S + A +T++IA G K+K +
Sbjct: 63 VKSGSFSIDQGVGVRAVAGDRTAFAYSDDLSPEAIAQAAAATKAIAAAGGGRQKVKAATS 122
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+K I LY +D ++S++ K+KLLERVE++AR +DPR+ +V+A L+GEYDV+L+ R
Sbjct: 123 LKGISGRDLYLPSDPLASLDATAKVKLLERVEQMARSRDPRITQVMAGLAGEYDVVLVAR 182
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
+DG + ADIRPLV++ VT+I E+NGRREIG G GGR++Y YFTD +L + V ++V++AL
Sbjct: 183 SDGALAADIRPLVRVSVTVIAEQNGRREIGTGGGGGRFDYGYFTDDVLSRYVDDAVHAAL 242
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
+NL+A+PAPAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAF+ IG+++A+K +T
Sbjct: 243 VNLDARPAPAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRIGEQVAAKGVT 302
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD+GTL NRRGS+NIDDEGNPTQCTTLIE+GILKGY+QD +NARLM M +TGNARRES+
Sbjct: 303 VVDDGTLPNRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDTLNARLMKMPVTGNARRESY 362
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A +P+PRMTNTYMLNG P+EII+SVKNGLYA NF GGQVDITNGKFVFSAS+AY+I++
Sbjct: 363 AALPMPRMTNTYMLNGDKDPQEIIASVKNGLYAVNFGGGQVDITNGKFVFSASEAYMIED 422
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSI 731
GKITYPVKGATLIG GP LK VSMIGNDM LD GVGVCGK+GQ VPVGVGQPTL+ID +
Sbjct: 423 GKITYPVKGATLIGSGPESLKYVSMIGNDMSLDTGVGVCGKEGQSVPVGVGQPTLRIDKM 482
Query: 732 TVGGT 736
TVGGT
Sbjct: 483 TVGGT 487
>gi|167563995|ref|ZP_02356911.1| peptidase U62 modulator of DNA gyrase [Burkholderia oklahomensis
EO147]
Length = 489
Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/485 (64%), Positives = 404/485 (83%), Gaps = 2/485 (0%)
Query: 254 ISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGI 313
I + I L +A+ +LL P+ LDE +L + L ++F ++VDYAD YFQ T++E W LEEGI
Sbjct: 3 IIEPGIRNLALAKDVLLTPYGLDETLLTRTLADIFTHRVDYADLYFQATRSEAWSLEEGI 62
Query: 314 VKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGK--IKIIKN 371
VK+G+FSI+QGVGVRA++GD+TAF YSDD+S + ++ A +T++IA GK I+ +
Sbjct: 63 VKSGSFSIDQGVGVRAVAGDRTAFAYSDDLSSDAILQAAAATKAIAAAGGGKQRIRAASS 122
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+K I LY +D ++S++ K+KLLERVE++AR +DPR+ +V+A L+GEYDV+L+ R
Sbjct: 123 LKGISGRDLYLPSDPLASLDATAKVKLLERVEQMARGRDPRITQVMAGLAGEYDVVLVAR 182
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
+DG + ADIRPLV++ VT+I E+NGRREIG+ G GGR++Y YFTD +L + V ++V++AL
Sbjct: 183 SDGALAADIRPLVRVSVTVIAEQNGRREIGSGGGGGRFDYGYFTDDVLSRYVDDAVHAAL 242
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
+NL+A+PAPAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAF+ IG+++A+K +T
Sbjct: 243 VNLDARPAPAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRIGEQVAAKGVT 302
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD+GTL NRRGS+NIDDEGNPTQCTTLIE+G+LKGY+QD +NARLM M +TGNARRES+
Sbjct: 303 VVDDGTLPNRRGSLNIDDEGNPTQCTTLIEDGVLKGYIQDTLNARLMKMPVTGNARRESY 362
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A +P+PRMTNTYMLNG P+EII SVK+GLYA NF GGQVDITNGKFVFSAS+AY+I+N
Sbjct: 363 AALPMPRMTNTYMLNGDKDPQEIIESVKHGLYAVNFGGGQVDITNGKFVFSASEAYMIEN 422
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSI 731
GK+TYPVKGATLIG GP LK VSMIGNDMKLD GVGVCGK+GQ VPVGVGQPTL++D++
Sbjct: 423 GKVTYPVKGATLIGSGPESLKYVSMIGNDMKLDTGVGVCGKEGQSVPVGVGQPTLRLDNM 482
Query: 732 TVGGT 736
TVGGT
Sbjct: 483 TVGGT 487
>gi|115350686|ref|YP_772525.1| C69 family peptidase [Burkholderia ambifaria AMMD]
gi|115280674|gb|ABI86191.1| microcin-processing peptidase 2, Unknown type peptidase, MEROPS
family U62 [Burkholderia ambifaria AMMD]
Length = 512
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/498 (63%), Positives = 404/498 (81%), Gaps = 2/498 (0%)
Query: 241 PSTIINQVKNCILISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQ 300
P + + + I + I L +A+ ILL P+ LDE +L + + ++F ++VDYAD YFQ
Sbjct: 14 PDNFLRTLDTRMNIIEPGIRNLALAKDILLTPYGLDESLLTRTIADIFTHRVDYADLYFQ 73
Query: 301 FTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIAN 360
T++E W LEEGIVK+G+FSI+QGVGVRA++GD+TAF YSDD+S + A +T++IA
Sbjct: 74 ATRSEAWSLEEGIVKSGSFSIDQGVGVRAVAGDRTAFAYSDDLSPEAIAQAAAATKAIAA 133
Query: 361 QSNG--KIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIA 418
G KI+ ++ I LY +D ++S++ K+KLLER+E++AR +DPRV +V+A
Sbjct: 134 AGGGRQKIRAATSLTGISGRDLYLPSDPLASLDATAKVKLLERIEQMARGRDPRVTQVMA 193
Query: 419 NLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI 478
L+GEYDV+L+ R+DG + ADIRPLV++ VT+I E+NGRREIG+ G GGR++Y YFTD +
Sbjct: 194 GLAGEYDVVLVARSDGALAADIRPLVRVSVTVIAEQNGRREIGSGGGGGRFDYAYFTDDV 253
Query: 479 LEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFS 538
L + V ++V++AL+NL+A+PAPAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAF+
Sbjct: 254 LSRYVDDAVHAALVNLDARPAPAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFA 313
Query: 539 NCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLM 598
IG+++A+K +T+VD+GTL NRRGS+NIDDEGNPTQCTTLIE+GILKGY+QD +NARLM
Sbjct: 314 GRIGEQVAAKGVTVVDDGTLPNRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDTLNARLM 373
Query: 599 NMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGK 658
M +TGNARRES+A +P+PRMTNTYMLNG P+EII+SVKNGLYA NF GGQVDITNGK
Sbjct: 374 KMPVTGNARRESYAALPMPRMTNTYMLNGDKDPQEIIASVKNGLYAVNFGGGQVDITNGK 433
Query: 659 FVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVP 718
FVFSAS+AY+I+NGK+TYPVKGATLIG GP LK VSMIGNDM LD GVGVCGK+GQ VP
Sbjct: 434 FVFSASEAYMIENGKVTYPVKGATLIGSGPESLKYVSMIGNDMSLDSGVGVCGKEGQSVP 493
Query: 719 VGVGQPTLKIDSITVGGT 736
VGVGQPTL+ID +TVGGT
Sbjct: 494 VGVGQPTLRIDKMTVGGT 511
>gi|170732062|ref|YP_001764009.1| peptidase U62 modulator of DNA gyrase [Burkholderia cenocepacia
MC0-3]
gi|254246264|ref|ZP_04939585.1| hypothetical protein BCPG_00998 [Burkholderia cenocepacia PC184]
gi|124871040|gb|EAY62756.1| hypothetical protein BCPG_00998 [Burkholderia cenocepacia PC184]
gi|169815304|gb|ACA89887.1| peptidase U62 modulator of DNA gyrase [Burkholderia cenocepacia
MC0-3]
Length = 488
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/485 (64%), Positives = 400/485 (82%), Gaps = 2/485 (0%)
Query: 254 ISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGI 313
I + I L +A+ ILL P+ LDE +L + + ++F ++VDYAD YFQ T++E W LEEGI
Sbjct: 3 IIEPGIRNLALAKDILLTPYGLDESLLTRTIADIFTHRVDYADLYFQATRSEAWSLEEGI 62
Query: 314 VKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNG--KIKIIKN 371
VK+G+FSI+QGVGVRA++GD+TAF YSDD+S + A +T++IA G KIK +
Sbjct: 63 VKSGSFSIDQGVGVRAVAGDRTAFAYSDDLSPEAIAQAAAATKAIAAAGGGRQKIKAASS 122
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ I LY +D ++S++ K+KLLER+E++AR +DPR+ +V+A L+GEYDV+L+ R
Sbjct: 123 LTGISGRDLYLPSDPLASLDATAKVKLLERIEQMARGRDPRITQVMAGLAGEYDVVLVAR 182
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
+DG + ADIRPLV++ VT+I E+NGRREIG+ G GGR++Y YFTD +L + V ++V++AL
Sbjct: 183 SDGALAADIRPLVRVSVTVIAEQNGRREIGSGGGGGRFDYGYFTDEVLSRYVDDAVHAAL 242
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
+NL+A+PAPAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAF+ IG+++A+K +T
Sbjct: 243 VNLDARPAPAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRIGEQVAAKGVT 302
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD+GTL NRRGS+NIDDEGNPTQCTTLIE+GILKGY+QD +NARLM M +TGNARRES+
Sbjct: 303 VVDDGTLPNRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDTLNARLMKMPVTGNARRESY 362
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A +P+PRMTNTYMLNG P+EII+SVKNGLYA NF GGQVDITNGKFVFSAS+AY+I+N
Sbjct: 363 AALPMPRMTNTYMLNGDKDPQEIIASVKNGLYAVNFGGGQVDITNGKFVFSASEAYMIEN 422
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSI 731
GKITYPVKGATLIG GP LK VSMIGNDM LD GVGVCGK+GQ VPVGVGQPTL+ID +
Sbjct: 423 GKITYPVKGATLIGSGPESLKYVSMIGNDMSLDTGVGVCGKEGQSVPVGVGQPTLRIDKM 482
Query: 732 TVGGT 736
TVGGT
Sbjct: 483 TVGGT 487
>gi|107021815|ref|YP_620142.1| C69 family peptidase [Burkholderia cenocepacia AU 1054]
gi|116688762|ref|YP_834385.1| peptidase U62, modulator of DNA gyrase [Burkholderia cenocepacia
HI2424]
gi|105892004|gb|ABF75169.1| microcin-processing peptidase 2, Unknown type peptidase, MEROPS
family U62 [Burkholderia cenocepacia AU 1054]
gi|116646851|gb|ABK07492.1| microcin-processing peptidase 2, Unknown type peptidase, MEROPS
family U62 [Burkholderia cenocepacia HI2424]
Length = 488
Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/485 (64%), Positives = 400/485 (82%), Gaps = 2/485 (0%)
Query: 254 ISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGI 313
I + I L +A+ ILL P+ LDE +L + + ++F ++VDYAD YFQ T++E W LEEGI
Sbjct: 3 IIEPGIRNLALAKDILLTPYGLDESLLTRTIADIFTHRVDYADLYFQATRSEAWSLEEGI 62
Query: 314 VKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNG--KIKIIKN 371
VK+G+FSI+QGVGVRA++GD+TAF YSDD+S + A +T++IA G KIK +
Sbjct: 63 VKSGSFSIDQGVGVRAVAGDRTAFAYSDDLSPEAIAQAAAATKAIAAAGGGRQKIKAASS 122
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ I LY +D ++S++ K+KLLER+E++AR +DPR+ +V+A L+GEYDV+L+ R
Sbjct: 123 LTGISGRDLYLPSDPLASLDATAKVKLLERIEQMARGRDPRITQVMAGLAGEYDVVLVAR 182
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
+DG + ADIRPLV++ VT+I E+NGRREIG+ G GGR++Y YFTD +L + V ++V++AL
Sbjct: 183 SDGALAADIRPLVRVSVTVIAEQNGRREIGSGGGGGRFDYGYFTDEVLSRYVDDAVHAAL 242
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
+NL+A+PAPAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAF+ IG+++A+K +T
Sbjct: 243 VNLDARPAPAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRIGEQVAAKGVT 302
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD+GTL NRRGS+NIDDEGNPTQCTTLIE+GILKGY+QD +NARLM M +TGNARRES+
Sbjct: 303 VVDDGTLPNRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDTLNARLMKMPVTGNARRESY 362
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A +P+PRMTNTYMLNG P+EII+SVKNGLYA NF GGQVDITNGKFVFSAS+AY+I+N
Sbjct: 363 AALPMPRMTNTYMLNGDKDPQEIIASVKNGLYAVNFGGGQVDITNGKFVFSASEAYMIEN 422
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSI 731
GK+TYPVKGATLIG GP LK VSMIGNDM LD GVGVCGK+GQ VPVGVGQPTL+ID +
Sbjct: 423 GKVTYPVKGATLIGSGPESLKYVSMIGNDMSLDTGVGVCGKEGQSVPVGVGQPTLRIDKM 482
Query: 732 TVGGT 736
TVGGT
Sbjct: 483 TVGGT 487
>gi|421749119|ref|ZP_16186613.1| peptidase [Cupriavidus necator HPC(L)]
gi|409772073|gb|EKN54187.1| peptidase [Cupriavidus necator HPC(L)]
Length = 455
Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 300/454 (66%), Positives = 382/454 (84%)
Query: 283 ILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDD 342
+L ++F +KVDYAD YFQ+T++E W LEEGIVK+G+F+I+QGVGVRA+SGD+TAF YSD+
Sbjct: 1 MLADIFTHKVDYADLYFQYTRSEAWSLEEGIVKSGSFNIDQGVGVRAVSGDRTAFAYSDE 60
Query: 343 ISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERV 402
IS L+ A +TR+I +G+ K+ ++ LY+ D + S+ EK+ LLERV
Sbjct: 61 ISLEALLQASAATRTIGKVGSGRTKVAGSLASHGGRDLYAPNDPLDSMPAAEKVALLERV 120
Query: 403 EKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGN 462
EK+AR KDPR+++V+A L+GEYDV+LI R+DG+I AD+RPLV++ VT+I E+NGRRE+G
Sbjct: 121 EKMARAKDPRIVQVMAGLAGEYDVVLIARSDGVIAADVRPLVRVSVTVIAEQNGRREMGT 180
Query: 463 SGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIG 522
SG GGRY+Y YF+D +L V +V+SAL+NLEA+PAPAG M VVLGPGWPG+LLHEA+G
Sbjct: 181 SGGGGRYHYGYFSDELLRTYVDEAVSSALVNLEARPAPAGAMTVVLGPGWPGVLLHEAVG 240
Query: 523 HGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIEN 582
HGLEGDFNRKGSSAF+ +G+R+A+K +T+VD+GTL RRGS+N+DDEGNPTQCTTLIE+
Sbjct: 241 HGLEGDFNRKGSSAFAGRMGERVAAKGVTVVDDGTLEGRRGSLNLDDEGNPTQCTTLIED 300
Query: 583 GILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGL 642
GIL+GY+QD +NARLM M +TGNARRESFA +P+PRMTNTYMLNG P+EII+SVK GL
Sbjct: 301 GILRGYIQDTLNARLMKMPVTGNARRESFAALPMPRMTNTYMLNGDRDPQEIIASVKRGL 360
Query: 643 YATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMK 702
YA NF GGQVDITNGKFVFSAS+AY+I++GKIT PVKGATL+G+GP LK V+MIGNDM+
Sbjct: 361 YAVNFGGGQVDITNGKFVFSASEAYLIEDGKITAPVKGATLVGNGPESLKDVTMIGNDMR 420
Query: 703 LDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
LD GVGVCGK+GQ VPVGVGQPTL+I+++TVGGT
Sbjct: 421 LDSGVGVCGKEGQSVPVGVGQPTLRIENMTVGGT 454
>gi|145589958|ref|YP_001156555.1| C69 family peptidase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145048364|gb|ABP34991.1| microcin-processing peptidase 2, Unknown type peptidase, MEROPS
family U62 [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 496
Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/482 (62%), Positives = 388/482 (80%), Gaps = 1/482 (0%)
Query: 255 SQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIV 314
++K + +A+SILLEP L E+ L G+MF +++D AD YFQ T++E+W LEEGIV
Sbjct: 15 TKKQADLIKLAKSILLEPTGLSEQDLHHTFGHMFSHRLDDADLYFQHTRSESWSLEEGIV 74
Query: 315 KTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKK 374
K+G+F+I+QGVGVRAI GDKTAF YSD+I+ L A K+TR I + GK + +
Sbjct: 75 KSGSFNIDQGVGVRAIYGDKTAFAYSDEINLEALSKAAKATRVIGPE-GGKQAVASKLFN 133
Query: 375 IKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDG 434
N LYS + + S+ +EKI LLE +E+ A+ +DPR+I+V+A+L+GE+DV+L+ R DG
Sbjct: 134 PLSNKLYSDINPLDSLQPKEKIALLESIERRAKARDPRIIQVMASLAGEFDVVLVARADG 193
Query: 435 LIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINL 494
L+ ADIRPLV++ V +I E+NGRRE G+SG G R++Y YF ++ + V +V+ AL+NL
Sbjct: 194 LLAADIRPLVRVSVHVIAEQNGRRESGSSGGGARHDYLYFDAELINRYVDEAVDGALVNL 253
Query: 495 EAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVD 554
E++PAPAG M VV+GPGWPG+LLHEA+GHGLEGDFNRKGSSAF+ IG+R+A+K +T+VD
Sbjct: 254 ESRPAPAGPMTVVMGPGWPGVLLHEAVGHGLEGDFNRKGSSAFAGRIGQRVAAKGVTVVD 313
Query: 555 NGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHI 614
+GTL+ RRGS+NIDDEG PTQCTTLIE+GILKGY+QD +NARLMNM +TGN RRESFA +
Sbjct: 314 DGTLSGRRGSLNIDDEGTPTQCTTLIEDGILKGYIQDSLNARLMNMPLTGNGRRESFASL 373
Query: 615 PIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKI 674
P+PRMTNTYML GK P+EI++S+K GLYA NF GGQVDIT+GKFVFSAS+AY ++NGKI
Sbjct: 374 PMPRMTNTYMLAGKDDPQEIVASIKRGLYAVNFGGGQVDITSGKFVFSASEAYWVENGKI 433
Query: 675 TYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVG 734
YPVKGAT+IG GP LK+VSMIGND+KLD GVGVCGK+GQ VPVGVGQPTL+IDS+TVG
Sbjct: 434 QYPVKGATIIGSGPESLKQVSMIGNDLKLDGGVGVCGKEGQSVPVGVGQPTLRIDSLTVG 493
Query: 735 GT 736
GT
Sbjct: 494 GT 495
>gi|206561620|ref|YP_002232385.1| putative DNA gyrase control protein [Burkholderia cenocepacia
J2315]
gi|421868716|ref|ZP_16300361.1| TldD protein, part of proposed TldE/TldD proteolytic complex
[Burkholderia cenocepacia H111]
gi|444363666|ref|ZP_21164080.1| TldD/PmbA family protein [Burkholderia cenocepacia BC7]
gi|444368883|ref|ZP_21168671.1| TldD/PmbA family protein [Burkholderia cenocepacia K56-2Valvano]
gi|198037662|emb|CAR53605.1| putative DNA gyrase control protein [Burkholderia cenocepacia
J2315]
gi|358071281|emb|CCE51239.1| TldD protein, part of proposed TldE/TldD proteolytic complex
[Burkholderia cenocepacia H111]
gi|443594578|gb|ELT63217.1| TldD/PmbA family protein [Burkholderia cenocepacia BC7]
gi|443600016|gb|ELT68247.1| TldD/PmbA family protein [Burkholderia cenocepacia K56-2Valvano]
Length = 488
Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/485 (64%), Positives = 400/485 (82%), Gaps = 2/485 (0%)
Query: 254 ISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGI 313
I + I L +A+ ILL P+ LDE +L + + ++F ++VDYAD YFQ T++E W LEEGI
Sbjct: 3 IIEPGIRNLALAKDILLTPYGLDESLLTRTIADIFTHRVDYADLYFQATRSEAWSLEEGI 62
Query: 314 VKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNG--KIKIIKN 371
VK+G+FSI+QGVGVRA++GD+TAF YSDD+S + A +T++IA G KIK +
Sbjct: 63 VKSGSFSIDQGVGVRAVAGDRTAFAYSDDLSPEAIAQAAAATKAIAAAGGGRQKIKAATS 122
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ I LY +D ++S++ K+KLLER+E++AR +DPR+ +V+A L+GEYDV+L+ R
Sbjct: 123 LTGISGRDLYLPSDPLASLDATAKVKLLERIEQMARGRDPRITQVMAGLAGEYDVVLVAR 182
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
+DG + ADIRPLV++ VT+I E+NGRREIG+ G GGR++Y YFTD +L + V ++V++AL
Sbjct: 183 SDGALAADIRPLVRVSVTVIAEQNGRREIGSGGGGGRFDYGYFTDDVLSRYVDDAVHAAL 242
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
+NL+A+PAPAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAF+ IG+++A+K +T
Sbjct: 243 VNLDARPAPAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRIGEQVAAKGVT 302
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD+GTL NRRGS+NIDDEGNPTQCTTLIE+GILKGY+QD +NARLM M +TGNARRES+
Sbjct: 303 VVDDGTLPNRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDTLNARLMKMPVTGNARRESY 362
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A +P+PRMTNTYMLNG P+EII+SVKNGLYA NF GGQVDITNGKFVFSAS+AY+I+N
Sbjct: 363 AALPMPRMTNTYMLNGDKDPQEIIASVKNGLYAVNFGGGQVDITNGKFVFSASEAYMIEN 422
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSI 731
GKITYPVKGATLIG GP LK VSMIGNDM LD GVGVCGK+GQ VPVGVGQPTL+ID +
Sbjct: 423 GKITYPVKGATLIGSGPESLKYVSMIGNDMSLDTGVGVCGKEGQSVPVGVGQPTLRIDKM 482
Query: 732 TVGGT 736
TVGGT
Sbjct: 483 TVGGT 487
>gi|171321427|ref|ZP_02910376.1| peptidase U62 modulator of DNA gyrase [Burkholderia ambifaria
MEX-5]
gi|171093292|gb|EDT38491.1| peptidase U62 modulator of DNA gyrase [Burkholderia ambifaria
MEX-5]
Length = 488
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/485 (64%), Positives = 399/485 (82%), Gaps = 2/485 (0%)
Query: 254 ISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGI 313
I + I L +A+ ILL P+ LDE +L + + ++F ++VDYAD YFQ T++E W LEEGI
Sbjct: 3 IIEPGIRNLALAKDILLTPYGLDESLLTRTIADIFTHRVDYADLYFQATRSEAWSLEEGI 62
Query: 314 VKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNG--KIKIIKN 371
VK+G+FSI+QGVGVRA++GD+TAF YSDD+S + A +T++IA G KIK
Sbjct: 63 VKSGSFSIDQGVGVRAVAGDRTAFAYSDDLSPEAIAQAAAATKAIAAAGGGRQKIKAATA 122
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ I LY +D ++S++ K+KLLER+E++AR +DPRV +V+A L+GEYDV+L+ R
Sbjct: 123 LTGISGRDLYLPSDPLASLDATAKVKLLERIEQMARGRDPRVTQVMAGLAGEYDVVLVAR 182
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
+DG + ADIRPLV++ VT+I E+NGRREIG+ G GGR++Y YFTD +L + V ++V++AL
Sbjct: 183 SDGALAADIRPLVRVSVTVIAEQNGRREIGSGGGGGRFDYAYFTDDVLSRYVDDAVHAAL 242
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
+NL+A+PAPAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAF+ IG+++A+K +T
Sbjct: 243 VNLDARPAPAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRIGEQVAAKGVT 302
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD+GTL NRRGS+NIDDEGNPTQCTTLIE+GILKGY+QD +NARLM M +TGNARRES+
Sbjct: 303 VVDDGTLPNRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDTLNARLMKMPVTGNARRESY 362
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A +P+PRMTNTYMLNG P+EII+SVKNGLYA NF GGQVDITNGKFVFSAS+AY+I+N
Sbjct: 363 AALPMPRMTNTYMLNGDKDPQEIIASVKNGLYAVNFGGGQVDITNGKFVFSASEAYMIEN 422
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSI 731
GK+TYPVKGATLIG GP LK VSMIGNDM LD GVGVCGK+GQ VPVGVGQPTL+ID +
Sbjct: 423 GKVTYPVKGATLIGSGPESLKYVSMIGNDMSLDSGVGVCGKEGQSVPVGVGQPTLRIDKM 482
Query: 732 TVGGT 736
TVGGT
Sbjct: 483 TVGGT 487
>gi|319764340|ref|YP_004128277.1| peptidase u62 modulator of DNA gyrase [Alicycliphilus denitrificans
BC]
gi|317118901|gb|ADV01390.1| peptidase U62 modulator of DNA gyrase [Alicycliphilus denitrificans
BC]
Length = 486
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/483 (62%), Positives = 388/483 (80%), Gaps = 4/483 (0%)
Query: 256 QKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVK 315
+ I L +AR +LL PF LDE L + L + ++VD AD YFQ+T++E W LEEGIVK
Sbjct: 5 EPTIERLAVARELLLAPFGLDESHLSRALAEIRAHQVDDADLYFQYTRSEGWSLEEGIVK 64
Query: 316 TGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSI-ANQSNGKIKIIKNIKK 374
TG+FSI+QGVGVRA+SG+KTAF YSDDIS+ +L++A ++ RSI A +G+ ++ KK
Sbjct: 65 TGSFSIDQGVGVRAVSGEKTAFAYSDDISEASLLDAARTVRSISATAQSGRARVAS--KK 122
Query: 375 I-KINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRND 433
I K SLY D I+S++ K++LLER E+ AR KDPRV +V+A L+ EYDV+L+ R D
Sbjct: 123 IAKSRSLYPHIDPIASMDSTAKVQLLERAEQRARAKDPRVAQVMAGLASEYDVVLVARAD 182
Query: 434 GLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALIN 493
G + AD+RPLV++ VT+I E+ GRRE+G+SG GGR+ YF+D + + V +VN+AL+N
Sbjct: 183 GTLAADVRPLVRMSVTVIAEQGGRREVGSSGGGGRFGLAYFSDEQIAQYVDEAVNAALVN 242
Query: 494 LEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIV 553
LE++PAPAG M VVLGPGWPG+LLHEA+GHGLEGDFNRKGSSAFS IG+R+A+K +T++
Sbjct: 243 LESRPAPAGEMTVVLGPGWPGVLLHEAVGHGLEGDFNRKGSSAFSGRIGQRVAAKGVTVL 302
Query: 554 DNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAH 613
D+GTLA+RRGS+N+DDEG+ TQ LIE+GILKGY+QD MNARLM ++ TGN RRES+AH
Sbjct: 303 DDGTLADRRGSLNVDDEGHATQRNVLIEDGILKGYIQDAMNARLMKVAPTGNGRRESYAH 362
Query: 614 IPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGK 673
IP+PRMTNTYML G P+EI++S+K GLYATNF GGQVDIT+GKFVFSAS+AY +++GK
Sbjct: 363 IPMPRMTNTYMLGGDKDPQEIVASIKRGLYATNFGGGQVDITSGKFVFSASEAYWVEDGK 422
Query: 674 ITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITV 733
I YPVKGAT++G GP LKKVSMIGNDM LD GVG CGK+GQ VPVGVGQPTL+ID ITV
Sbjct: 423 ILYPVKGATIVGSGPESLKKVSMIGNDMALDSGVGTCGKEGQSVPVGVGQPTLRIDGITV 482
Query: 734 GGT 736
GGT
Sbjct: 483 GGT 485
>gi|170700482|ref|ZP_02891487.1| peptidase U62 modulator of DNA gyrase [Burkholderia ambifaria
IOP40-10]
gi|170134606|gb|EDT02929.1| peptidase U62 modulator of DNA gyrase [Burkholderia ambifaria
IOP40-10]
Length = 488
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/485 (64%), Positives = 400/485 (82%), Gaps = 2/485 (0%)
Query: 254 ISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGI 313
I + I L +A+ ILL P+ LDE +L + + ++F ++VDYAD YFQ T++E W LEEGI
Sbjct: 3 IIEPGIRNLALAKDILLTPYGLDESLLTRTIADIFTHRVDYADLYFQATRSEAWSLEEGI 62
Query: 314 VKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNG--KIKIIKN 371
VK+G+FSI+QGVGVRA++GD+TAF YSDD+S + A +T++IA G KI+ +
Sbjct: 63 VKSGSFSIDQGVGVRAVAGDRTAFAYSDDLSPEAIAQAAAATKAIAAAGGGRQKIRAATS 122
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ I LY +D ++S++ K+KLLER+E++AR +DPRV +V+A L+GEYDV+L+ R
Sbjct: 123 LTGISGRDLYLPSDPLASLDATAKVKLLERIEQMARGRDPRVTQVMAGLAGEYDVVLVAR 182
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
+DG + ADIRPLV++ VT+I E+NGRREIG+ G GGR++Y YFTD +L + V ++V++AL
Sbjct: 183 SDGALAADIRPLVRVSVTVIAEQNGRREIGSGGGGGRFDYGYFTDDVLSRYVDDAVHAAL 242
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
+NL+A+PAPAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAF+ IG+++A+K +T
Sbjct: 243 VNLDARPAPAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRIGEQVAAKGVT 302
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD+GTL NRRGS+NIDDEGNPTQCTTLIE+GILKGY+QD +NARLM M +TGNARRES+
Sbjct: 303 VVDDGTLPNRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDTLNARLMKMPVTGNARRESY 362
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A +P+PRMTNTYMLNG P+EII+SVKNGLYA NF GGQVDITNGKFVFSAS+AY+I+N
Sbjct: 363 AALPMPRMTNTYMLNGDKDPQEIIASVKNGLYAVNFGGGQVDITNGKFVFSASEAYMIEN 422
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSI 731
GK+TYPVKGATLIG GP LK VSMIGNDM LD GVGVCGK+GQ VPVGVGQPTL+ID +
Sbjct: 423 GKVTYPVKGATLIGSGPESLKYVSMIGNDMSLDSGVGVCGKEGQSVPVGVGQPTLRIDKM 482
Query: 732 TVGGT 736
TVGGT
Sbjct: 483 TVGGT 487
>gi|330826362|ref|YP_004389665.1| peptidase U62 modulator of DNA gyrase [Alicycliphilus denitrificans
K601]
gi|329311734|gb|AEB86149.1| peptidase U62 modulator of DNA gyrase [Alicycliphilus denitrificans
K601]
Length = 486
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/483 (62%), Positives = 387/483 (80%), Gaps = 4/483 (0%)
Query: 256 QKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVK 315
+ I L +AR +LL PF LDE L + L + ++VD AD YFQ+T++E W LEEGIVK
Sbjct: 5 EPTIERLAVARELLLAPFGLDESHLYRALAEIRAHQVDDADLYFQYTRSEGWSLEEGIVK 64
Query: 316 TGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSI-ANQSNGKIKIIKNIKK 374
TG+FSI+QGVGVRA+SG+KTAF YSDDIS+ +L++A ++ RSI A +G+ ++ KK
Sbjct: 65 TGSFSIDQGVGVRAVSGEKTAFAYSDDISEASLLDAARTVRSISATAQSGRARVAS--KK 122
Query: 375 I-KINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRND 433
I K SLY D I+S++ K++LLER E+ AR KDPRV +V+A L+ EYDV+L+ R D
Sbjct: 123 IAKSRSLYPHIDPIASMDSTAKVQLLERAEQRARAKDPRVAQVMAGLASEYDVVLVARAD 182
Query: 434 GLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALIN 493
G + AD+RPLV++ VT+I E+ GRRE+G+SG GGR+ YF+D + + V +VN+AL+N
Sbjct: 183 GTLAADVRPLVRMSVTVIAEQGGRREVGSSGGGGRFGLAYFSDEQIAQYVDEAVNAALVN 242
Query: 494 LEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIV 553
LE++PAPAG M VVLGPGWPG+LLHEA+GHGLEGDFNRKGSSAFS IG+R+A+K +T++
Sbjct: 243 LESRPAPAGEMTVVLGPGWPGVLLHEAVGHGLEGDFNRKGSSAFSGRIGQRVAAKGVTVL 302
Query: 554 DNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAH 613
D+GTLA+RRGS+N+DDEG+ TQ LIE+GILKGY+QD MNARLM ++ TGN RRES+AH
Sbjct: 303 DDGTLADRRGSLNVDDEGHATQRNVLIEDGILKGYIQDAMNARLMKVAPTGNGRRESYAH 362
Query: 614 IPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGK 673
IP+PRMTNTYML G P+EI++S+K GLYATNF GGQVDIT+GKFVFSAS+AY ++ GK
Sbjct: 363 IPMPRMTNTYMLGGDKDPQEIVASIKRGLYATNFGGGQVDITSGKFVFSASEAYWVEGGK 422
Query: 674 ITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITV 733
I YPVKGAT++G GP LKKVSMIGNDM LD GVG CGK+GQ VPVGVGQPTL+ID ITV
Sbjct: 423 ILYPVKGATIVGSGPESLKKVSMIGNDMALDSGVGTCGKEGQSVPVGVGQPTLRIDGITV 482
Query: 734 GGT 736
GGT
Sbjct: 483 GGT 485
>gi|172059717|ref|YP_001807369.1| peptidase U62 modulator of DNA gyrase [Burkholderia ambifaria
MC40-6]
gi|171992234|gb|ACB63153.1| peptidase U62 modulator of DNA gyrase [Burkholderia ambifaria
MC40-6]
Length = 488
Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/485 (64%), Positives = 400/485 (82%), Gaps = 2/485 (0%)
Query: 254 ISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGI 313
I + I L +A+ ILL P+ LDE +L + + ++F ++VDYAD YFQ T++E W LEEGI
Sbjct: 3 IIEPGIRNLALAKDILLTPYGLDESLLTRTIADIFTHRVDYADLYFQATRSEAWSLEEGI 62
Query: 314 VKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNG--KIKIIKN 371
VK+G+FSI+QGVGVRA++GD+TAF YSDD+S + A +T++IA G KI+ +
Sbjct: 63 VKSGSFSIDQGVGVRAVAGDRTAFAYSDDLSPEAIAQAAAATKAIAAAGGGRQKIRAATS 122
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ I LY +D ++S++ K+KLLER+E++AR +DPRV +V+A L+GEYDV+L+ R
Sbjct: 123 LTGISGRDLYLPSDPLASLDATAKVKLLERIEQMARGRDPRVTQVMAGLAGEYDVVLVAR 182
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
+DG + ADIRPLV++ VT+I E+NGRREIG+ G GGR++Y YFTD +L + V ++V++AL
Sbjct: 183 SDGALAADIRPLVRVSVTVIAEQNGRREIGSGGGGGRFDYAYFTDDVLSRYVDDAVHAAL 242
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
+NL+A+PAPAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAF+ IG+++A+K +T
Sbjct: 243 VNLDARPAPAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRIGEQVAAKGVT 302
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD+GTL NRRGS+NIDDEGNPTQCTTLIE+GILKGY+QD +NARLM M +TGNARRES+
Sbjct: 303 VVDDGTLPNRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDTLNARLMKMPVTGNARRESY 362
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A +P+PRMTNTYMLNG P+EII+SVKNGLYA NF GGQVDITNGKFVFSAS+AY+I+N
Sbjct: 363 AALPMPRMTNTYMLNGDKDPQEIIASVKNGLYAVNFGGGQVDITNGKFVFSASEAYMIEN 422
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSI 731
GK+TYPVKGATLIG GP LK VSMIGNDM LD GVGVCGK+GQ VPVGVGQPTL+ID +
Sbjct: 423 GKVTYPVKGATLIGSGPESLKYVSMIGNDMSLDSGVGVCGKEGQSVPVGVGQPTLRIDKM 482
Query: 732 TVGGT 736
TVGGT
Sbjct: 483 TVGGT 487
>gi|238026289|ref|YP_002910520.1| peptidase U62, modulator of DNA gyrase [Burkholderia glumae BGR1]
gi|237875483|gb|ACR27816.1| Peptidase U62, modulator of DNA gyrase [Burkholderia glumae BGR1]
Length = 488
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/485 (64%), Positives = 402/485 (82%), Gaps = 2/485 (0%)
Query: 254 ISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGI 313
I + I L +A+ ILL P+ LDE +L + L ++F ++VDYAD YFQ T++E W LEEGI
Sbjct: 3 IIEPGIRNLALAKDILLTPYGLDETLLTRTLADIFTHRVDYADLYFQATRSEAWSLEEGI 62
Query: 314 VKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGK--IKIIKN 371
VK+G+FSI+QGVGVRA++G++TAF YSDD+S + A +T++IA G+ I++ +
Sbjct: 63 VKSGSFSIDQGVGVRAVAGERTAFAYSDDLSPEAIRQAASATKAIAAAGGGRRRIQVASS 122
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ + LY +D ++S++ K+KLLERVE++AR +DPR+ +V+A L+GEYDV+L+ R
Sbjct: 123 LTGVAGRDLYLPSDPLASLDATAKVKLLERVEQMARGRDPRITQVMAGLAGEYDVVLVAR 182
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
+DG + ADIRPLV++ VT+I E++GRREIG+ G GGR++Y YF+D +L + V ++V++AL
Sbjct: 183 SDGALAADIRPLVRVSVTVIAEQDGRREIGSGGGGGRFDYGYFSDEVLSRYVDDAVHAAL 242
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
+NL+A+PAPAG M VVLG GWPG+LLHEAIGHGLEGDFNRKGSSAF+ IG+R+A+K +T
Sbjct: 243 VNLDARPAPAGAMTVVLGSGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRIGERVAAKGVT 302
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD+GTL NRRGS+NIDDEGNPTQCTTLIE+GILKGY+QD +NARLM M +TGNARRES+
Sbjct: 303 VVDDGTLPNRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDTLNARLMKMPVTGNARRESY 362
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A +P+PRMTNTYMLNG P+EII+SVK+GLYA NF GGQVDITNGKFVFSAS+AY+I+N
Sbjct: 363 AALPMPRMTNTYMLNGDKDPQEIIASVKHGLYAVNFGGGQVDITNGKFVFSASEAYMIEN 422
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSI 731
GK+TYPVKGATLIG GP LK VSMIGNDMKLD GVGVCGK+GQ VPVGVGQPTL+IDS+
Sbjct: 423 GKVTYPVKGATLIGSGPESLKYVSMIGNDMKLDSGVGVCGKEGQSVPVGVGQPTLRIDSM 482
Query: 732 TVGGT 736
TVGGT
Sbjct: 483 TVGGT 487
>gi|424902981|ref|ZP_18326494.1| peptidase U62 modulator of DNA gyrase [Burkholderia thailandensis
MSMB43]
gi|390930854|gb|EIP88255.1| peptidase U62 modulator of DNA gyrase [Burkholderia thailandensis
MSMB43]
Length = 521
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/499 (62%), Positives = 405/499 (81%), Gaps = 5/499 (1%)
Query: 243 TIINQVKNCIL---ISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYF 299
T +++++N + I + +H L +A+ ILL P+ LDE +L + L ++F ++VDYAD YF
Sbjct: 21 TTVSEIENSRIRMNIIEPGVHNLALAKDILLTPYGLDESLLTRTLADIFTHRVDYADLYF 80
Query: 300 QFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTL--INAVKSTRS 357
Q T++E W LEEGIVK+G+FSI+QGVGVRA++G++TAF YSDD+S + + A +
Sbjct: 81 QATRSEAWSLEEGIVKSGSFSIDQGVGVRAVAGERTAFAYSDDLSPDAIRQAAAATKAIA 140
Query: 358 IANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVI 417
A KI+ ++K I LY D ++S++ K+KLLERVE++AR +DPR+ +V+
Sbjct: 141 AAGGGKQKIRAASSLKGISGRDLYLPADPLASLDATAKVKLLERVEQMARGRDPRITQVM 200
Query: 418 ANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDM 477
A L+GEYDV+L+ R+DG + ADIRPLV++ VT+I E+NGRREIG+ G GGR++Y YFTD
Sbjct: 201 AGLAGEYDVVLVARSDGALAADIRPLVRVSVTVIAEQNGRREIGSGGGGGRFDYGYFTDD 260
Query: 478 ILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAF 537
+L + V ++V++AL+NL+A+PAPAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAF
Sbjct: 261 VLARYVDDAVHAALVNLDARPAPAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAF 320
Query: 538 SNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARL 597
+ IG+++A+K +T+VD+GTL NRRGS+NIDDEGNPTQCTTLIE+G+LKGY+QD +NARL
Sbjct: 321 AGRIGEQVAAKGVTVVDDGTLPNRRGSLNIDDEGNPTQCTTLIEDGVLKGYIQDTLNARL 380
Query: 598 MNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNG 657
M M +TGNARRES+A +P+PRMTNTYMLNG P EII SV++GLYA NF GGQVDITNG
Sbjct: 381 MKMPVTGNARRESYAALPMPRMTNTYMLNGDKDPREIIESVEHGLYAVNFGGGQVDITNG 440
Query: 658 KFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMV 717
KFVFSAS+AY+I+NGK+TYPVKGATLIG GP LK VSMIGNDM+LD GVGVCGK+GQ V
Sbjct: 441 KFVFSASEAYMIENGKVTYPVKGATLIGSGPESLKYVSMIGNDMRLDTGVGVCGKEGQSV 500
Query: 718 PVGVGQPTLKIDSITVGGT 736
PVGVGQPTL++D++TVGGT
Sbjct: 501 PVGVGQPTLRLDNMTVGGT 519
>gi|423016552|ref|ZP_17007273.1| modulator of DNA gyrase family protein 2 [Achromobacter
xylosoxidans AXX-A]
gi|338780494|gb|EGP44902.1| modulator of DNA gyrase family protein 2 [Achromobacter
xylosoxidans AXX-A]
Length = 486
Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 298/479 (62%), Positives = 385/479 (80%)
Query: 258 NIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTG 317
+I L A+S+LL+P+ L E + + LG +F +KVDYAD YFQ+T++E W LEEGIVKTG
Sbjct: 7 SIASLATAKSLLLDPWGLTEADMARALGEIFTHKVDYADLYFQYTRSEGWSLEEGIVKTG 66
Query: 318 NFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKI 377
+FSI+QGVGVRA+SG+KTAF YSD +S L+++ + R IA + GK+K+ ++
Sbjct: 67 SFSISQGVGVRAVSGEKTAFAYSDSLSAEALLSSAHAVRGIARRGAGKVKVAAQVEAEMG 126
Query: 378 NSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIV 437
SLY+ D +++++ EK+ LLERVE++AR +DP VI+V+A L EYDV+L+ +DG +
Sbjct: 127 RSLYADIDPVATLSAPEKVALLERVERMARARDPHVIQVMAGLGAEYDVVLVAGSDGRLA 186
Query: 438 ADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAK 497
AD+RPLV+L +T+I E+NGRRE+G++G GGR YFTD +L+ V +V+ A++NLEA+
Sbjct: 187 ADVRPLVRLSLTVIAERNGRREMGHAGGGGRLGLAYFTDEMLQGYVERAVHEAMVNLEAR 246
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
PAPAG M VVLG GWPGILLHEA+GHGLEGDFNRKGSS FS IG+R+ASK +T+VD+GT
Sbjct: 247 PAPAGEMTVVLGSGWPGILLHEAVGHGLEGDFNRKGSSVFSGRIGERVASKGVTVVDDGT 306
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
+ +RRGS+NIDDEGN TQ LIE+GIL+GYMQD +NARLM + TGN RRESFAH+P+P
Sbjct: 307 IPDRRGSLNIDDEGNATQRNVLIEDGILRGYMQDTLNARLMKTAATGNGRRESFAHLPMP 366
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNTYML G PEEIISSVK GLYA NF GGQVDITNGKFVFSAS+AY+I++GKITYP
Sbjct: 367 RMTNTYMLAGDKAPEEIISSVKRGLYAANFGGGQVDITNGKFVFSASEAYMIEDGKITYP 426
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
VKGATLIG+GP+ + +VSMIG+D+KLD GVG CGKDGQ VPVGVG PT++++ +TVGGT
Sbjct: 427 VKGATLIGNGPDAMTRVSMIGDDLKLDSGVGTCGKDGQSVPVGVGMPTVRMEGLTVGGT 485
>gi|313201059|ref|YP_004039717.1| peptidase u62 modulator of DNA gyrase [Methylovorus sp. MP688]
gi|312440375|gb|ADQ84481.1| peptidase U62 modulator of DNA gyrase [Methylovorus sp. MP688]
Length = 491
Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 302/475 (63%), Positives = 384/475 (80%), Gaps = 2/475 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+ A LL+P LD L +LGNM +KVDYAD YFQ+++ E+W LEEG VK+GNFSI
Sbjct: 18 FDTATETLLKPSGLDVAALQGVLGNMMSHKVDYADLYFQYSRAESWGLEEGQVKSGNFSI 77
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QGVGVRA+SG+KTAF YSDDI+ L A +T++IA + G + I++I LY
Sbjct: 78 DQGVGVRAVSGEKTAFAYSDDINLPALQQAANATKAIA--AIGAEQAGSAIQRIDAPQLY 135
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
D I+S++ K+KLLER+E AR DPR+ +V+A+++GEY+VI+I R+DG++ AD+R
Sbjct: 136 IPHDPIASLSAEAKVKLLERLEGYARKADPRITQVMASIAGEYEVIMIARHDGMMAADVR 195
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPA 501
PLV+L + +I E NGRRE G++G GGR++Y YFTD +L+ +V+ AL+NLEA+PAPA
Sbjct: 196 PLVRLSIQVIAEANGRREQGSAGGGGRFDYAYFTDEVLQDYAQKAVHQALVNLEARPAPA 255
Query: 502 GIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANR 561
G M VVLG GWPGILLHEAIGHGLEGDFNRKGSSAFSN IG+++A++ +T+VD+GT++NR
Sbjct: 256 GSMTVVLGSGWPGILLHEAIGHGLEGDFNRKGSSAFSNAIGQQVAARGVTVVDDGTISNR 315
Query: 562 RGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTN 621
RGS+NIDDEGNPTQ T LIE+G L+GY+QD +NARLM M +TGNARRES+AHIP+PRMTN
Sbjct: 316 RGSLNIDDEGNPTQRTVLIEDGYLRGYIQDSLNARLMGMPMTGNARRESYAHIPMPRMTN 375
Query: 622 TYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGA 681
TYMLNG PEEII SVK GLYA NF GGQVDIT+GKFVFSA++A++I++GK+TYPVKGA
Sbjct: 376 TYMLNGNMAPEEIIKSVKKGLYAANFGGGQVDITSGKFVFSAAEAWMIEDGKLTYPVKGA 435
Query: 682 TLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
TLIG+GP +LK+VSMIGNDM LD GVG CGK+GQ VPVGVGQPTL+ID +TVGGT
Sbjct: 436 TLIGNGPEVLKRVSMIGNDMALDSGVGTCGKEGQSVPVGVGQPTLRIDGLTVGGT 490
>gi|253998956|ref|YP_003051019.1| peptidase U62 modulator of DNA gyrase [Methylovorus glucosetrophus
SIP3-4]
gi|253985635|gb|ACT50492.1| peptidase U62 modulator of DNA gyrase [Methylovorus glucosetrophus
SIP3-4]
Length = 491
Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 302/475 (63%), Positives = 384/475 (80%), Gaps = 2/475 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+ A LL+P LD L +LGNM +KVDYAD YFQ+++ E+W LEEG VK+GNFSI
Sbjct: 18 FDTATETLLQPSGLDVAALQGVLGNMMSHKVDYADLYFQYSRAESWGLEEGQVKSGNFSI 77
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QGVGVRA+SG+KTAF YSDDI+ L A +T++IA + G + I++I LY
Sbjct: 78 DQGVGVRAVSGEKTAFAYSDDINLPALQQAANATKAIA--AIGAEQAGSAIQRIDAPQLY 135
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
D I+S++ K+KLLER+E AR DPR+ +V+A+++GEY+VI+I R+DG++ AD+R
Sbjct: 136 IPHDPIASLSAVAKVKLLERLEGYARKADPRITQVMASIAGEYEVIMIARHDGMMAADVR 195
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPA 501
PLV+L + +I E NGRRE G++G GGR++Y YFTD +L+ +V+ AL+NLEA+PAPA
Sbjct: 196 PLVRLSIQVIAEANGRREQGSAGGGGRFDYAYFTDEVLQDYAQKAVHQALVNLEARPAPA 255
Query: 502 GIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANR 561
G M VVLG GWPGILLHEAIGHGLEGDFNRKGSSAFSN IG+++A++ +T+VD+GT++NR
Sbjct: 256 GSMTVVLGSGWPGILLHEAIGHGLEGDFNRKGSSAFSNAIGQQVAARGVTVVDDGTISNR 315
Query: 562 RGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTN 621
RGS+NIDDEGNPTQ T LIE+G L+GY+QD +NARLM M +TGNARRES+AHIP+PRMTN
Sbjct: 316 RGSLNIDDEGNPTQRTVLIEDGYLRGYIQDSLNARLMGMPMTGNARRESYAHIPMPRMTN 375
Query: 622 TYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGA 681
TYMLNG PEEII SVK GLYA NF GGQVDIT+GKFVFSA++A++I++GK+TYPVKGA
Sbjct: 376 TYMLNGNMAPEEIIKSVKKGLYAANFGGGQVDITSGKFVFSAAEAWMIEDGKLTYPVKGA 435
Query: 682 TLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
TLIG+GP +LK+VSMIGNDM LD GVG CGK+GQ VPVGVGQPTL+ID +TVGGT
Sbjct: 436 TLIGNGPEVLKRVSMIGNDMALDSGVGTCGKEGQSVPVGVGQPTLRIDGLTVGGT 490
>gi|121595938|ref|YP_987834.1| microcin-processing peptidase 2 [Acidovorax sp. JS42]
gi|120608018|gb|ABM43758.1| microcin-processing peptidase 2 [Acidovorax sp. JS42]
Length = 486
Score = 640 bits (1650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/483 (62%), Positives = 391/483 (80%), Gaps = 4/483 (0%)
Query: 256 QKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVK 315
+ I L +AR +LL PF LDE L + L + ++VD AD YFQ+T++E W LEEGIVK
Sbjct: 5 EPTIERLGLARELLLTPFGLDESHLSRALAEIRAHRVDDADLYFQYTRSEGWSLEEGIVK 64
Query: 316 TGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSI-ANQSNGKIKIIKNIKK 374
TG+FSI+QGVGVRA+SG+KTAF YSDDIS+ +L++A ++ RSI A G++++ KK
Sbjct: 65 TGSFSIDQGVGVRAVSGEKTAFAYSDDISEASLLDAARTVRSISAADKVGRVRVAS--KK 122
Query: 375 IK-INSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRND 433
I SLY D I+S++ +K++LLER E+ AR KDPRV++V+A L+ EYDV+L+ R D
Sbjct: 123 IANSRSLYPHIDPIASMDSTDKVRLLERAEQCARAKDPRVVQVMAGLASEYDVVLVARAD 182
Query: 434 GLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALIN 493
GL+ AD+RPLV+L +T+I E+NGRRE+G++G GGR+ YFTD + + V +VN+AL+N
Sbjct: 183 GLMAADVRPLVRLSITVIAEQNGRREVGSAGGGGRFGLAYFTDEQIGQYVHEAVNAALVN 242
Query: 494 LEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIV 553
LE++PAPAG M VVLGPGWPG+LLHEA+GHGLEGDFNRKGSSAFS IG+R+A+K +T++
Sbjct: 243 LESRPAPAGEMTVVLGPGWPGVLLHEAVGHGLEGDFNRKGSSAFSGRIGQRVAAKGVTVL 302
Query: 554 DNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAH 613
D+GTLA+RRGS+N+DDEG+ TQ LIE+GILKGY+QD MNARLM + TGN RRES+AH
Sbjct: 303 DDGTLADRRGSLNVDDEGHATQRNVLIEDGILKGYIQDAMNARLMGVKPTGNGRRESYAH 362
Query: 614 IPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGK 673
IP+PRMTNTYML G P+EI++S+K GLYATNF GGQVDIT+GKFVFSAS+AY ++NGK
Sbjct: 363 IPMPRMTNTYMLGGDKDPQEIVASIKKGLYATNFGGGQVDITSGKFVFSASEAYWVENGK 422
Query: 674 ITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITV 733
I YPVKGAT++G GP LKKV+MIGNDM+LD GVG CGK+GQ VPVGVGQPT++ID +TV
Sbjct: 423 IQYPVKGATIVGSGPESLKKVTMIGNDMRLDSGVGTCGKEGQSVPVGVGQPTMRIDGLTV 482
Query: 734 GGT 736
GGT
Sbjct: 483 GGT 485
>gi|348618007|ref|ZP_08884540.1| peptidase U62 modulator of DNA gyrase [Candidatus Glomeribacter
gigasporarum BEG34]
gi|347816712|emb|CCD29199.1| peptidase U62 modulator of DNA gyrase [Candidatus Glomeribacter
gigasporarum BEG34]
Length = 491
Score = 640 bits (1650), Expect = e-180, Method: Compositional matrix adjust.
Identities = 296/481 (61%), Positives = 376/481 (78%), Gaps = 5/481 (1%)
Query: 261 PLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFS 320
PL+ A++ LL P+ LDE L + L + ++DYAD YFQ T++E W LEEGIVK+G+F
Sbjct: 10 PLDTAKACLLAPYGLDEAALQRTLAEVMLPRIDYADLYFQTTRSEAWSLEEGIVKSGSFG 69
Query: 321 INQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKI----IKNIKKIK 376
I+QGVGVRAISG+++AF YS+D+S L A ++ R+I ++I +KN K+
Sbjct: 70 IDQGVGVRAISGERSAFAYSNDLSLTALHQAAQTVRAIGAHGGQPVQISARSVKNRKRGD 129
Query: 377 I-NSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGL 435
LY D ++S+ K+ LLER+E++AR +DPR+ +V+A+LSGEYDV+LI R DG
Sbjct: 130 PPRDLYRNADPLTSLAASAKVALLERIEQMARTRDPRITQVMASLSGEYDVVLIARGDGG 189
Query: 436 IVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLE 495
+ AD RPLV++ VT+I ++NGRRE G++G GGR++Y YF+D +L V +VN AL NLE
Sbjct: 190 LAADARPLVRVSVTVIAQQNGRRETGSAGGGGRFDYGYFSDAVLAHYVDEAVNIALTNLE 249
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A+PAPAG M VVLGPGWPG+LLHEA+GHGLEGDFNRKG SAFS +G+RIA+K +T+VD+
Sbjct: 250 AQPAPAGAMTVVLGPGWPGVLLHEAVGHGLEGDFNRKGFSAFSGRMGQRIAAKGVTVVDD 309
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTL NRRGS+NIDDEG PTQCTTLIE+GIL GY+QD +NARLM M +TGNARRES+ +P
Sbjct: 310 GTLPNRRGSLNIDDEGTPTQCTTLIEDGILTGYLQDTLNARLMKMPLTGNARRESYCTLP 369
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYMLNG PEE+I+SVKNGLYA NF GGQVDITNG+FVFSA+ AY I+NG+IT
Sbjct: 370 LPRMTNTYMLNGDQSPEEMIASVKNGLYAVNFDGGQVDITNGQFVFSAALAYRIENGRIT 429
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATL G GP LK++ MIGNDM LD GVGVCGK+GQ VPVGVGQPTL++D + VGG
Sbjct: 430 APVKGATLSGSGPEALKRIRMIGNDMALDAGVGVCGKEGQSVPVGVGQPTLRLDRMIVGG 489
Query: 736 T 736
T
Sbjct: 490 T 490
>gi|222112126|ref|YP_002554390.1| peptidase u62 modulator of DNA gyrase [Acidovorax ebreus TPSY]
gi|221731570|gb|ACM34390.1| peptidase U62 modulator of DNA gyrase [Acidovorax ebreus TPSY]
Length = 486
Score = 639 bits (1649), Expect = e-180, Method: Compositional matrix adjust.
Identities = 299/481 (62%), Positives = 387/481 (80%)
Query: 256 QKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVK 315
+ I L +AR +LL PF LDE L + L + ++VD AD YFQ+T++E W LEEGIVK
Sbjct: 5 EPTIERLGLARELLLTPFGLDESHLSRALAEIRAHRVDDADLYFQYTRSEGWSLEEGIVK 64
Query: 316 TGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKI 375
TG+FSI+QGVGVRA+SG+KTAF YSDDIS+ +L++A ++ R+I+ + + K
Sbjct: 65 TGSFSIDQGVGVRAVSGEKTAFAYSDDISEASLLDAARTVRTISAADKVGRARVASKKIA 124
Query: 376 KINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGL 435
K SLY D I+S++ +K++LLER E+ AR KDPRV++V+A L+ EYDV+L+ R DGL
Sbjct: 125 KSRSLYPHIDPIASMDSTDKVRLLERAEQCARAKDPRVVQVMAGLASEYDVVLVARADGL 184
Query: 436 IVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLE 495
+ AD+RPLV+L +T+I E+NGRRE+G++G GGR+ YFTD + + V +VN+AL+NLE
Sbjct: 185 MAADVRPLVRLSITVIAEQNGRREVGSAGGGGRFGLAYFTDEQIGQYVHEAVNAALVNLE 244
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
++PAPAG M VVLGPGWPG+LLHEA+GHGLEGDFNRKGSSAFS IG+R+A+K +T++D+
Sbjct: 245 SRPAPAGEMTVVLGPGWPGVLLHEAVGHGLEGDFNRKGSSAFSGRIGQRVAAKGVTVLDD 304
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTLA+RRGS+N+DDEG+ TQ LIE+GILKGY+QD MNARLM + TGN RRES+AHIP
Sbjct: 305 GTLADRRGSLNVDDEGHATQRNVLIEDGILKGYIQDAMNARLMGVKPTGNGRRESYAHIP 364
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G P+EI++S+K GLYATNF GGQVDIT+GKFVFSAS+AY ++NGKI
Sbjct: 365 MPRMTNTYMLGGDKDPQEIVASIKKGLYATNFGGGQVDITSGKFVFSASEAYWVENGKIQ 424
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
YPVKGAT++G GP LKKV+MIGNDM+LD GVG CGK+GQ VPVGVGQPT++ID +TVGG
Sbjct: 425 YPVKGATIVGSGPESLKKVTMIGNDMRLDSGVGTCGKEGQSVPVGVGQPTMRIDGLTVGG 484
Query: 736 T 736
T
Sbjct: 485 T 485
>gi|410420883|ref|YP_006901332.1| hypothetical protein BN115_3103 [Bordetella bronchiseptica MO149]
gi|427819644|ref|ZP_18986707.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
gi|408448178|emb|CCJ59859.1| conserved hypothetical protein [Bordetella bronchiseptica MO149]
gi|410570644|emb|CCN18836.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
Length = 486
Score = 639 bits (1648), Expect = e-180, Method: Compositional matrix adjust.
Identities = 298/478 (62%), Positives = 382/478 (79%)
Query: 259 IHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGN 318
I L A+++LL+P+ L E L + LG +F +KVDYAD YFQ+T++E W LEEGIVKTG+
Sbjct: 8 ISALATAKNLLLDPWGLTEADLARALGEIFTHKVDYADLYFQYTRSEGWSLEEGIVKTGS 67
Query: 319 FSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKIN 378
FSI QGVGVRA+SG+KTAF YSD +S + L+++ ++ R IA Q GK+K+ + +
Sbjct: 68 FSIGQGVGVRAVSGEKTAFAYSDSLSADALLSSARTVRGIARQGAGKVKVAAQVPPVDGR 127
Query: 379 SLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVA 438
SLY+ D + ++ +K+ LLER+E++AR +DP VI+V+A L EYDV+L+ +DG + A
Sbjct: 128 SLYADIDPLVTLTAADKVALLERIERMARARDPHVIQVMAGLGAEYDVVLVAGSDGRLAA 187
Query: 439 DIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKP 498
D+RPLV+L +T+I E+NGRRE+G++G GGR YFTD IL V +V+ AL+NLEA+P
Sbjct: 188 DVRPLVRLSLTVIAERNGRREMGHAGGGGRTGLAYFTDDILRDYVERAVHEALVNLEARP 247
Query: 499 APAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL 558
APAG M VVLG GWPGILLHEA+GHGLEGDFNRKGSS FS+ IG+R+AS +T++D+GTL
Sbjct: 248 APAGEMTVVLGSGWPGILLHEAVGHGLEGDFNRKGSSVFSDRIGERVASPGVTVIDDGTL 307
Query: 559 ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPR 618
+RRGS+NIDDEGN TQ LIE+GIL+GYMQD +NARLM + TGN RRESFAH+P+PR
Sbjct: 308 PDRRGSLNIDDEGNATQRNVLIEDGILRGYMQDTLNARLMKTAATGNGRRESFAHLPMPR 367
Query: 619 MTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPV 678
MTNTYML G PEEII+SVK GLYA NF GGQVDITNGKFVFSAS+AY+I+NGK+TYPV
Sbjct: 368 MTNTYMLGGATPPEEIIASVKRGLYAVNFGGGQVDITNGKFVFSASEAYMIENGKVTYPV 427
Query: 679 KGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
KGATLIG+GP+ + +VS+IGNDM+LD GVG CGKDGQ VPVGVG PTL+++ +TVGGT
Sbjct: 428 KGATLIGNGPDAMNRVSLIGNDMRLDSGVGTCGKDGQSVPVGVGMPTLRMEGLTVGGT 485
>gi|251766636|ref|ZP_02264512.2| TldD/PmbA family protein [Burkholderia mallei PRL-20]
gi|243065331|gb|EES47517.1| TldD/PmbA family protein [Burkholderia mallei PRL-20]
Length = 498
Score = 639 bits (1648), Expect = e-180, Method: Compositional matrix adjust.
Identities = 311/477 (65%), Positives = 395/477 (82%), Gaps = 2/477 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L++A+ ILL P+ LDE +L + L ++F ++VDYAD YFQ T++E W LEEGIVK+G+FSI
Sbjct: 20 LSLAKDILLTPYGLDEALLTRTLADIFTHRVDYADLYFQATRSEAWSLEEGIVKSGSFSI 79
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKI--IKNIKKIKINS 379
+QGVGVRA++G++TAF YSDD+S + A +T++IA GK KI +K +
Sbjct: 80 DQGVGVRAVAGERTAFAYSDDLSPEAIRQAAVATKAIAAAGGGKQKIRAATALKGVSGRD 139
Query: 380 LYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVAD 439
LY D ++S++ K+KLLERVE++AR +DPR+ +V+A L+GEYDV+L+ R+DG + AD
Sbjct: 140 LYLPADPLASLDATAKVKLLERVEQMARGRDPRIKQVMAGLAGEYDVVLVARSDGALAAD 199
Query: 440 IRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPA 499
IRPLV++ VT+I E NGRREIG G GGR++Y YFTD +L + V ++V++AL+NL+A+PA
Sbjct: 200 IRPLVRVSVTVIAEHNGRREIGTGGGGGRFDYGYFTDDVLARYVDDAVHAALVNLDARPA 259
Query: 500 PAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLA 559
PAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAF+ IG+++A+K +T+VD+GTL
Sbjct: 260 PAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRIGEQVAAKGVTVVDDGTLP 319
Query: 560 NRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRM 619
NRRGS+NIDDEGNPTQCTTLIE+GILKGY+QD +NARLM M +TGNARRES+A +P+PRM
Sbjct: 320 NRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDTLNARLMKMPVTGNARRESYAALPMPRM 379
Query: 620 TNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVK 679
TNTYMLNG P EII SVK+GLYA NF GGQVDITNGKFVFSAS+AY+I+NGK+TYPVK
Sbjct: 380 TNTYMLNGDKDPREIIESVKHGLYAVNFGGGQVDITNGKFVFSASEAYMIENGKVTYPVK 439
Query: 680 GATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
GATLIG GP LK VSMIGNDM+LD GVGVCGK+GQ VPVGVGQPTL++D++TVGGT
Sbjct: 440 GATLIGSGPESLKYVSMIGNDMRLDTGVGVCGKEGQSVPVGVGQPTLRLDNMTVGGT 496
>gi|33597075|ref|NP_884718.1| hypothetical protein BPP2487 [Bordetella parapertussis 12822]
gi|33566526|emb|CAE37782.1| conserved hypothetical protein [Bordetella parapertussis]
Length = 486
Score = 639 bits (1648), Expect = e-180, Method: Compositional matrix adjust.
Identities = 297/478 (62%), Positives = 381/478 (79%)
Query: 259 IHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGN 318
I L A+++LL+P+ L E L + LG +F +KVDYAD YFQ+T++E W LEEGIVKTG+
Sbjct: 8 ISALATAKTLLLDPWGLTEADLARALGEIFTHKVDYADLYFQYTRSEGWSLEEGIVKTGS 67
Query: 319 FSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKIN 378
FSI QGVGVRA+SG+KTAF YSD +S + L+++ ++ R IA Q GK+K+ + +
Sbjct: 68 FSIGQGVGVRAVSGEKTAFAYSDSLSADALLSSARTVRGIARQGAGKVKVAAQVPPVDGR 127
Query: 379 SLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVA 438
SLY+ D + ++ +K+ LLER+E++AR +DP VI+V+A L EYDV+L+ +DG + A
Sbjct: 128 SLYADIDPLVTLTAADKVALLERIERMARARDPHVIQVMAGLGAEYDVVLVAGSDGRLAA 187
Query: 439 DIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKP 498
D+RPLV+L +T+I E+NGRRE+G++G GGR YFTD IL V +V+ AL+NLEA+
Sbjct: 188 DVRPLVRLSLTVIAERNGRREMGHAGGGGRTGLAYFTDDILRDYVERAVHEALVNLEARA 247
Query: 499 APAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL 558
APAG M VVLG GWPGILLHEA+GHGLEGDFNRKGSS FS+ IG+R+AS +T++D+GTL
Sbjct: 248 APAGEMTVVLGSGWPGILLHEAVGHGLEGDFNRKGSSVFSDRIGERVASSGVTVIDDGTL 307
Query: 559 ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPR 618
+RRGS+NIDDEGN TQ LIE+GIL+GYMQD +NARLM + TGN RRESFAH+P+PR
Sbjct: 308 PDRRGSLNIDDEGNATQRNVLIEDGILRGYMQDTLNARLMKTAATGNGRRESFAHLPMPR 367
Query: 619 MTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPV 678
MTNTYML G PEEII+SVK GLYA NF GGQVDITNGKFVFSAS+AY+I+NGK+TYPV
Sbjct: 368 MTNTYMLGGATPPEEIIASVKRGLYAVNFGGGQVDITNGKFVFSASEAYMIENGKVTYPV 427
Query: 679 KGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
KGATLIG+GP+ + +VS+IGNDM+LD GVG CGKDGQ VPVGVG PTL+++ +TVGGT
Sbjct: 428 KGATLIGNGPDAMNRVSLIGNDMRLDSGVGTCGKDGQSVPVGVGMPTLRMEGLTVGGT 485
>gi|53720446|ref|YP_109432.1| DNA gyrase control protein [Burkholderia pseudomallei K96243]
gi|53726215|ref|YP_103896.1| tldD protein [Burkholderia mallei ATCC 23344]
gi|67642300|ref|ZP_00441058.1| TldD protein [Burkholderia mallei GB8 horse 4]
gi|76811310|ref|YP_334706.1| tldD protein [Burkholderia pseudomallei 1710b]
gi|121600792|ref|YP_991837.1| tldD protein [Burkholderia mallei SAVP1]
gi|124383769|ref|YP_001027096.1| tldD protein [Burkholderia mallei NCTC 10229]
gi|126448663|ref|YP_001081747.1| TldD/PmbA family protein [Burkholderia mallei NCTC 10247]
gi|126453927|ref|YP_001067560.1| TldD/PmbA family protein [Burkholderia pseudomallei 1106a]
gi|134280319|ref|ZP_01767030.1| TldD/PmbA family protein [Burkholderia pseudomallei 305]
gi|217420787|ref|ZP_03452292.1| TldD/PmbA family protein [Burkholderia pseudomallei 576]
gi|226194172|ref|ZP_03789771.1| TldD/PmbA family protein [Burkholderia pseudomallei Pakistan 9]
gi|237813691|ref|YP_002898142.1| TldD protein [Burkholderia pseudomallei MSHR346]
gi|242315212|ref|ZP_04814228.1| TldD/PmbA family protein [Burkholderia pseudomallei 1106b]
gi|254178795|ref|ZP_04885449.1| tldD protein [Burkholderia mallei ATCC 10399]
gi|254180748|ref|ZP_04887346.1| TldD/PmbA family protein [Burkholderia pseudomallei 1655]
gi|254191585|ref|ZP_04898088.1| TldD/PmbA family protein [Burkholderia pseudomallei Pasteur 52237]
gi|254194952|ref|ZP_04901382.1| TldD/PmbA family protein [Burkholderia pseudomallei S13]
gi|254202606|ref|ZP_04908969.1| TldD/PmbA family protein [Burkholderia mallei FMH]
gi|254207945|ref|ZP_04914295.1| TldD/PmbA family protein [Burkholderia mallei JHU]
gi|254259613|ref|ZP_04950667.1| TldD/PmbA family protein [Burkholderia pseudomallei 1710a]
gi|254299160|ref|ZP_04966610.1| TldD/PmbA family protein [Burkholderia pseudomallei 406e]
gi|254355915|ref|ZP_04972193.1| TldD/PmbA family protein [Burkholderia mallei 2002721280]
gi|386860587|ref|YP_006273536.1| tldD protein [Burkholderia pseudomallei 1026b]
gi|403519994|ref|YP_006654128.1| TldD/PmbA family protein [Burkholderia pseudomallei BPC006]
gi|418377958|ref|ZP_12965974.1| tldD protein [Burkholderia pseudomallei 354a]
gi|418539050|ref|ZP_13104651.1| tldD protein [Burkholderia pseudomallei 1026a]
gi|418539830|ref|ZP_13105405.1| tldD protein [Burkholderia pseudomallei 1258a]
gi|418546080|ref|ZP_13111312.1| tldD protein [Burkholderia pseudomallei 1258b]
gi|418552528|ref|ZP_13117387.1| tldD protein [Burkholderia pseudomallei 354e]
gi|52210860|emb|CAH36848.1| putative DNA gyrase control protein [Burkholderia pseudomallei
K96243]
gi|52429638|gb|AAU50231.1| tldD protein [Burkholderia mallei ATCC 23344]
gi|76580763|gb|ABA50238.1| tldD protein [Burkholderia pseudomallei 1710b]
gi|121229602|gb|ABM52120.1| tldD protein [Burkholderia mallei SAVP1]
gi|124291789|gb|ABN01058.1| tldD protein [Burkholderia mallei NCTC 10229]
gi|126227569|gb|ABN91109.1| TldD/PmbA family protein [Burkholderia pseudomallei 1106a]
gi|126241533|gb|ABO04626.1| TldD/PmbA family protein [Burkholderia mallei NCTC 10247]
gi|134248326|gb|EBA48409.1| TldD/PmbA family protein [Burkholderia pseudomallei 305]
gi|147746853|gb|EDK53930.1| TldD/PmbA family protein [Burkholderia mallei FMH]
gi|147751839|gb|EDK58906.1| TldD/PmbA family protein [Burkholderia mallei JHU]
gi|148024890|gb|EDK83068.1| TldD/PmbA family protein [Burkholderia mallei 2002721280]
gi|157808993|gb|EDO86163.1| TldD/PmbA family protein [Burkholderia pseudomallei 406e]
gi|157939256|gb|EDO94926.1| TldD/PmbA family protein [Burkholderia pseudomallei Pasteur 52237]
gi|160694709|gb|EDP84717.1| tldD protein [Burkholderia mallei ATCC 10399]
gi|169651701|gb|EDS84394.1| TldD/PmbA family protein [Burkholderia pseudomallei S13]
gi|184211287|gb|EDU08330.1| TldD/PmbA family protein [Burkholderia pseudomallei 1655]
gi|217396199|gb|EEC36216.1| TldD/PmbA family protein [Burkholderia pseudomallei 576]
gi|225933637|gb|EEH29625.1| TldD/PmbA family protein [Burkholderia pseudomallei Pakistan 9]
gi|237505234|gb|ACQ97552.1| TldD protein [Burkholderia pseudomallei MSHR346]
gi|238523425|gb|EEP86863.1| TldD protein [Burkholderia mallei GB8 horse 4]
gi|242138451|gb|EES24853.1| TldD/PmbA family protein [Burkholderia pseudomallei 1106b]
gi|254218302|gb|EET07686.1| TldD/PmbA family protein [Burkholderia pseudomallei 1710a]
gi|385346731|gb|EIF53406.1| tldD protein [Burkholderia pseudomallei 1026a]
gi|385363579|gb|EIF69346.1| tldD protein [Burkholderia pseudomallei 1258a]
gi|385365473|gb|EIF71147.1| tldD protein [Burkholderia pseudomallei 1258b]
gi|385372937|gb|EIF78019.1| tldD protein [Burkholderia pseudomallei 354e]
gi|385377823|gb|EIF82362.1| tldD protein [Burkholderia pseudomallei 354a]
gi|385657715|gb|AFI65138.1| tldD protein [Burkholderia pseudomallei 1026b]
gi|403075637|gb|AFR17217.1| TldD/PmbA family protein [Burkholderia pseudomallei BPC006]
Length = 498
Score = 638 bits (1646), Expect = e-180, Method: Compositional matrix adjust.
Identities = 311/477 (65%), Positives = 395/477 (82%), Gaps = 2/477 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L++A+ ILL P+ LDE +L + L ++F ++VDYAD YFQ T++E W LEEGIVK+G+FSI
Sbjct: 20 LSLAKDILLTPYGLDEALLTRTLADIFTHRVDYADLYFQATRSEAWSLEEGIVKSGSFSI 79
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKI--IKNIKKIKINS 379
+QGVGVRA++G++TAF YSDD+S + A +T++IA GK KI +K +
Sbjct: 80 DQGVGVRAVAGERTAFAYSDDLSPEAIRQAAVATKAIAAAGGGKQKIRAATALKGVSGRD 139
Query: 380 LYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVAD 439
LY D ++S++ K+KLLERVE++AR +DPR+ +V+A L+GEYDV+L+ R+DG + AD
Sbjct: 140 LYLPADPLASLDATAKVKLLERVEQMARGRDPRIKQVMAGLAGEYDVVLVARSDGALAAD 199
Query: 440 IRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPA 499
IRPLV++ VT+I E NGRREIG G GGR++Y YFTD +L + V ++V++AL+NL+A+PA
Sbjct: 200 IRPLVRVSVTVIAEHNGRREIGTGGGGGRFDYGYFTDDVLARYVDDAVHAALVNLDARPA 259
Query: 500 PAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLA 559
PAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAF+ IG+++A+K +T+VD+GTL
Sbjct: 260 PAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRIGEQVAAKGVTVVDDGTLP 319
Query: 560 NRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRM 619
NRRGS+NIDDEGNPTQCTTLIE+GILKGY+QD +NARLM M +TGNARRES+A +P+PRM
Sbjct: 320 NRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDTLNARLMKMPVTGNARRESYAALPMPRM 379
Query: 620 TNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVK 679
TNTYMLNG P EII SVK+GLYA NF GGQVDITNGKFVFSAS+AY+I+NGK+TYPVK
Sbjct: 380 TNTYMLNGDKDPREIIESVKHGLYAVNFGGGQVDITNGKFVFSASEAYMIENGKVTYPVK 439
Query: 680 GATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
GATLIG GP LK VSMIGNDM+LD GVGVCGK+GQ VPVGVGQPTL++D++TVGGT
Sbjct: 440 GATLIGSGPESLKYVSMIGNDMRLDTGVGVCGKEGQSVPVGVGQPTLRLDNMTVGGT 496
>gi|83721404|ref|YP_441843.1| tldD protein [Burkholderia thailandensis E264]
gi|83655229|gb|ABC39292.1| tldD protein [Burkholderia thailandensis E264]
Length = 482
Score = 638 bits (1645), Expect = e-180, Method: Compositional matrix adjust.
Identities = 308/477 (64%), Positives = 392/477 (82%), Gaps = 2/477 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L +A+ ILL P+ LDE +L + L ++F ++VDYAD YFQ T++E W LEEGIVK+G+FSI
Sbjct: 4 LALAKDILLTPYGLDEALLTRTLADIFTHRVDYADLYFQATRSEAWSLEEGIVKSGSFSI 63
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTL--INAVKSTRSIANQSNGKIKIIKNIKKIKINS 379
+QGVGVRA++G++TAF YSDD+S + + A + A KI+ ++K I
Sbjct: 64 DQGVGVRAVAGERTAFAYSDDLSPDAIRQAAAATKAIAAAGGGKHKIRAASSLKGISGRD 123
Query: 380 LYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVAD 439
LY D ++S++ K+KLLERVE++AR +DPR+ +V+A L+GEYDV+L+ R+DG + AD
Sbjct: 124 LYLPADPLASLDATAKVKLLERVEQMARGRDPRITQVMAGLAGEYDVVLVARSDGALAAD 183
Query: 440 IRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPA 499
IRPLV++ VT+I E NGRREIG+ G GGR++Y YFTD +L + V ++V++AL+NL+A+PA
Sbjct: 184 IRPLVRVSVTVIAEHNGRREIGSGGGGGRFDYGYFTDDVLARYVDDAVHAALVNLDARPA 243
Query: 500 PAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLA 559
PAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAF+ IG+++A+K +T+VD+GTL
Sbjct: 244 PAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRIGEQVAAKGVTVVDDGTLP 303
Query: 560 NRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRM 619
NRRGS+NIDDEGNPTQCTTLIE+GILKGY+QD +NARLM M +TGNARRES+A +P+PRM
Sbjct: 304 NRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDTLNARLMKMPVTGNARRESYAALPMPRM 363
Query: 620 TNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVK 679
TNTYMLNG P EII SVK+GLYA NF GGQVDITNGKFVFSAS+AY+I+NGK+TYPVK
Sbjct: 364 TNTYMLNGDKDPREIIESVKHGLYAVNFGGGQVDITNGKFVFSASEAYMIENGKVTYPVK 423
Query: 680 GATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
GATLIG GP LK VSMIGNDM+LD GVGVCGK+GQ VPVGVGQPTL++D++TVGGT
Sbjct: 424 GATLIGSGPESLKYVSMIGNDMRLDTGVGVCGKEGQSVPVGVGQPTLRLDNMTVGGT 480
>gi|257138012|ref|ZP_05586274.1| TldD protein [Burkholderia thailandensis E264]
Length = 498
Score = 638 bits (1645), Expect = e-180, Method: Compositional matrix adjust.
Identities = 308/482 (63%), Positives = 394/482 (81%), Gaps = 2/482 (0%)
Query: 257 KNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKT 316
+ + L +A+ ILL P+ LDE +L + L ++F ++VDYAD YFQ T++E W LEEGIVK+
Sbjct: 15 QGVRNLALAKDILLTPYGLDEALLTRTLADIFTHRVDYADLYFQATRSEAWSLEEGIVKS 74
Query: 317 GNFSINQGVGVRAISGDKTAFFYSDDISKNTL--INAVKSTRSIANQSNGKIKIIKNIKK 374
G+FSI+QGVGVRA++G++TAF YSDD+S + + A + A KI+ ++K
Sbjct: 75 GSFSIDQGVGVRAVAGERTAFAYSDDLSPDAIRQAAAATKAIAAAGGGKHKIRAASSLKG 134
Query: 375 IKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDG 434
I LY D ++S++ K+KLLERVE++AR +DPR+ +V+A L+GEYDV+L+ R+DG
Sbjct: 135 ISGRDLYLPADPLASLDATAKVKLLERVEQMARGRDPRITQVMAGLAGEYDVVLVARSDG 194
Query: 435 LIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINL 494
+ ADIRPLV++ VT+I E NGRREIG+ G GGR++Y YFTD +L + V ++V++AL+NL
Sbjct: 195 ALAADIRPLVRVSVTVIAEHNGRREIGSGGGGGRFDYGYFTDDVLARYVDDAVHAALVNL 254
Query: 495 EAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVD 554
+A+PAPAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAF+ IG+++A+K +T+VD
Sbjct: 255 DARPAPAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRIGEQVAAKGVTVVD 314
Query: 555 NGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHI 614
+GTL NRRGS+NIDDEGNPTQCTTLIE+GILKGY+QD +NARLM M +TGNARRES+A +
Sbjct: 315 DGTLPNRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDTLNARLMKMPVTGNARRESYAAL 374
Query: 615 PIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKI 674
P+PRMTNTYMLNG P EII SVK+GLYA NF GGQVDITNGKFVFSAS+AY+I+NGK+
Sbjct: 375 PMPRMTNTYMLNGDKDPREIIESVKHGLYAVNFGGGQVDITNGKFVFSASEAYMIENGKV 434
Query: 675 TYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVG 734
TYPVKGATLIG GP LK VSMIGNDM+LD GVGVCGK+GQ VPVGVGQPTL++D++TVG
Sbjct: 435 TYPVKGATLIGSGPESLKYVSMIGNDMRLDTGVGVCGKEGQSVPVGVGQPTLRLDNMTVG 494
Query: 735 GT 736
GT
Sbjct: 495 GT 496
>gi|171464087|ref|YP_001798200.1| peptidase U62 modulator of DNA gyrase [Polynucleobacter necessarius
subsp. necessarius STIR1]
gi|171193625|gb|ACB44586.1| peptidase U62 modulator of DNA gyrase [Polynucleobacter necessarius
subsp. necessarius STIR1]
Length = 496
Score = 638 bits (1645), Expect = e-180, Method: Compositional matrix adjust.
Identities = 298/482 (61%), Positives = 388/482 (80%), Gaps = 1/482 (0%)
Query: 255 SQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIV 314
++K + +A+SILLEP L E+ L GN+F +++D AD YFQ T++E+W LEEGIV
Sbjct: 15 AKKQADLIKLAKSILLEPTGLSEQDLHHTFGNLFTHRLDDADLYFQHTRSESWSLEEGIV 74
Query: 315 KTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKK 374
K+G+F+I+QGVGVRAI GDKTAF YSD+I+ L A K+TR I + GK + +
Sbjct: 75 KSGSFNIDQGVGVRAIYGDKTAFAYSDEINLEALNKAAKATRVIGPE-GGKQAVASKLFN 133
Query: 375 IKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDG 434
N LYS + + S+ +EKI LLE +E+ A+ +DPR+I+V+A+L+GE+DV+L+ R DG
Sbjct: 134 PVSNKLYSDINPLDSLQPKEKIALLENIERRAKARDPRIIQVMASLAGEFDVVLVVRADG 193
Query: 435 LIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINL 494
L+ AD+RPLV++ V +I E+NGRRE G+SG G R++Y YF ++ + V +V+ AL+NL
Sbjct: 194 LLAADVRPLVRVSVHVIAEQNGRRESGSSGGGARHDYLYFDKELINRYVDEAVDGALVNL 253
Query: 495 EAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVD 554
E++PAPAG M VV+GPGWPG+LLHEA+GHGLEGDFNRKGSSAF+ IG+R+A+K +T+VD
Sbjct: 254 ESRPAPAGPMTVVMGPGWPGVLLHEAVGHGLEGDFNRKGSSAFAGRIGQRVAAKGVTVVD 313
Query: 555 NGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHI 614
+GTL+ RRGS+NIDDEG PTQCTTLIE+GILKGY+QD +NARLMNM +TGN RRESF+ +
Sbjct: 314 DGTLSGRRGSLNIDDEGTPTQCTTLIEDGILKGYIQDNLNARLMNMPLTGNGRRESFSSL 373
Query: 615 PIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKI 674
P+PRMTNTYML GK P+EI++S+K GLYA NF GGQVDIT+GKFVFSAS+AY ++NGKI
Sbjct: 374 PMPRMTNTYMLAGKDDPQEIVASIKRGLYAVNFGGGQVDITSGKFVFSASEAYWVENGKI 433
Query: 675 TYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVG 734
YPVKGAT+IG GP LK+VSMIGND+KLD G+GVCGK+GQ VPVGVGQPTL+IDS+TVG
Sbjct: 434 QYPVKGATIIGSGPESLKQVSMIGNDLKLDGGIGVCGKEGQSVPVGVGQPTLRIDSLTVG 493
Query: 735 GT 736
GT
Sbjct: 494 GT 495
>gi|33600919|ref|NP_888479.1| hypothetical protein BB1934 [Bordetella bronchiseptica RB50]
gi|412338894|ref|YP_006967649.1| hypothetical protein BN112_1581 [Bordetella bronchiseptica 253]
gi|427815377|ref|ZP_18982441.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
gi|33568519|emb|CAE32431.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
gi|408768728|emb|CCJ53498.1| conserved hypothetical protein [Bordetella bronchiseptica 253]
gi|410566377|emb|CCN23938.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
Length = 486
Score = 638 bits (1645), Expect = e-180, Method: Compositional matrix adjust.
Identities = 297/478 (62%), Positives = 381/478 (79%)
Query: 259 IHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGN 318
I L A+++LL+P+ L E L + LG +F +KVDYAD YFQ+T++E W LEEGIVKTG+
Sbjct: 8 ISALATAKTLLLDPWGLTEADLARALGEIFTHKVDYADLYFQYTRSEGWSLEEGIVKTGS 67
Query: 319 FSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKIN 378
FSI QGVGVRA+SG+KTAF YSD +S + L+++ ++ R IA Q GK+K+ + +
Sbjct: 68 FSIGQGVGVRAVSGEKTAFAYSDSLSADALLSSARTVRGIARQGAGKVKVAAQVPPVDGR 127
Query: 379 SLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVA 438
SLY+ D + ++ +K+ LLER+E++AR +DP VI+V+A L EYDV+L+ +DG + A
Sbjct: 128 SLYADIDPLVTLTAADKVALLERIERMARARDPHVIQVMAGLGAEYDVVLVAGSDGRLAA 187
Query: 439 DIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKP 498
D+RPLV+L +T+I E+NGRRE+G++G GGR YFTD IL V +V+ AL+NLEA+
Sbjct: 188 DVRPLVRLSLTVIAERNGRREMGHAGGGGRTGLAYFTDDILRDYVERAVHEALVNLEARA 247
Query: 499 APAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL 558
APAG M VVLG GWPGILLHEA+GHGLEGDFNRKGSS FS+ IG+R+AS +T++D+GTL
Sbjct: 248 APAGEMTVVLGSGWPGILLHEAVGHGLEGDFNRKGSSVFSDRIGERVASPGVTVIDDGTL 307
Query: 559 ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPR 618
+RRGS+NIDDEGN TQ LIE+GIL+GYMQD +NARLM + TGN RRESFAH+P+PR
Sbjct: 308 PDRRGSLNIDDEGNATQRNVLIEDGILRGYMQDTLNARLMKTAATGNGRRESFAHLPMPR 367
Query: 619 MTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPV 678
MTNTYML G PEEII+SVK GLYA NF GGQVDITNGKFVFSAS+AY+I+NGK+TYPV
Sbjct: 368 MTNTYMLGGATPPEEIIASVKRGLYAVNFGGGQVDITNGKFVFSASEAYMIENGKVTYPV 427
Query: 679 KGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
KGATLIG+GP+ + +VS+IGNDM+LD GVG CGKDGQ VPVGVG PTL+++ +TVGGT
Sbjct: 428 KGATLIGNGPDAMNRVSLIGNDMRLDSGVGTCGKDGQSVPVGVGMPTLRMEGLTVGGT 485
>gi|33593847|ref|NP_881491.1| hypothetical protein BP2909 [Bordetella pertussis Tohama I]
gi|384205152|ref|YP_005590891.1| hypothetical protein BPTD_2878 [Bordetella pertussis CS]
gi|408416705|ref|YP_006627412.1| hypothetical protein BN118_2912 [Bordetella pertussis 18323]
gi|33563920|emb|CAE43181.1| conserved hypothetical protein [Bordetella pertussis Tohama I]
gi|332383266|gb|AEE68113.1| hypothetical protein BPTD_2878 [Bordetella pertussis CS]
gi|401778875|emb|CCJ64337.1| conserved hypothetical protein [Bordetella pertussis 18323]
Length = 486
Score = 638 bits (1645), Expect = e-180, Method: Compositional matrix adjust.
Identities = 298/478 (62%), Positives = 381/478 (79%)
Query: 259 IHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGN 318
I L A+++LL+P+ L E L + LG +F +KVDYAD YFQ+T++E W LEEGIVKTG+
Sbjct: 8 ISALATAKNLLLDPWGLTEADLARALGEIFTHKVDYADLYFQYTRSEGWSLEEGIVKTGS 67
Query: 319 FSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKIN 378
FSI QGVGVRA+SG+KTAF YSD +S + L+++ ++ R IA Q GK+K+ + +
Sbjct: 68 FSIGQGVGVRAVSGEKTAFAYSDSLSADALLSSARTVRGIARQGAGKVKVAAQVPPVDGR 127
Query: 379 SLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVA 438
SLY+ D + ++ +K+ LLER+E++AR +DP VI+V+A L EYDV+L+ +DG + A
Sbjct: 128 SLYADIDPLVTLTAADKVALLERIERMARARDPHVIQVMAGLGAEYDVVLVAGSDGRLAA 187
Query: 439 DIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKP 498
D+RPLV+L +T+I E+NGRRE+G++G GGR YFTD IL V +V+ AL NLEA+P
Sbjct: 188 DVRPLVRLSLTVIAERNGRREMGHAGGGGRTGLAYFTDDILRDYVERAVHEALANLEARP 247
Query: 499 APAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL 558
APAG M VVLG GWPGILLHEA+GHGLEGDFNRKGSS FS+ IG+R+AS +T++D+GTL
Sbjct: 248 APAGEMTVVLGSGWPGILLHEAVGHGLEGDFNRKGSSVFSDRIGERVASPGVTVIDDGTL 307
Query: 559 ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPR 618
+RRGS+NIDDEGN TQ LIE+GIL+GYMQD +NARLM + TGN RRESFAH+P+PR
Sbjct: 308 PDRRGSLNIDDEGNATQRNVLIEDGILRGYMQDTLNARLMKTAATGNGRRESFAHLPMPR 367
Query: 619 MTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPV 678
MTNTYML G PEEII+SVK GLYA NF GGQVDITNGKFVFSAS+AY+I+NGK+TYPV
Sbjct: 368 MTNTYMLGGATPPEEIIASVKRGLYAVNFGGGQVDITNGKFVFSASEAYMIENGKVTYPV 427
Query: 679 KGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
KGATLIG+GP+ + +VS+IGNDM+LD GVG CGKDGQ VPVGVG PTL+++ +TVGGT
Sbjct: 428 KGATLIGNGPDAMNRVSLIGNDMRLDSGVGTCGKDGQSVPVGVGMPTLRMEGLTVGGT 485
>gi|260220038|emb|CBA27176.1| Protein tldD [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 486
Score = 638 bits (1645), Expect = e-180, Method: Compositional matrix adjust.
Identities = 302/481 (62%), Positives = 383/481 (79%)
Query: 256 QKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVK 315
+ I L A+S+LL PF LDE L + L + ++VD AD YFQ+T++E W LEEGIVK
Sbjct: 5 EPTIERLATAKSLLLTPFGLDESHLTRALNEIKAHQVDEADLYFQYTRSEGWSLEEGIVK 64
Query: 316 TGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKI 375
TG+FSI+QGVGVRA+SG+KTAF YSDDIS+ +L++A ++ R+I+ + K K
Sbjct: 65 TGSFSIDQGVGVRAVSGEKTAFAYSDDISEASLLDAARTVRTISAAAQNKRAKAATPKIA 124
Query: 376 KINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGL 435
LY+ D I++++ K++LL +VEK+AR KDPR+I+V+A L+ EYDV+L+ R DG
Sbjct: 125 GGRKLYAGLDPIATLDSTAKVELLGKVEKLARAKDPRIIQVMAGLAAEYDVVLVARADGT 184
Query: 436 IVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLE 495
+ AD+RPLV+L VT+I E+ GRRE+G+SG GGR+ YFTD +E V +V++AL NL+
Sbjct: 185 LAADVRPLVRLSVTVIAEQKGRREVGSSGGGGRFGLAYFTDAQIEDYVDQAVHAALTNLD 244
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A+PAPAG M VVLG GWPGILLHEAIGHGLEGDFNRKGSSAFS IG+R+A+K +T++D+
Sbjct: 245 ARPAPAGEMTVVLGAGWPGILLHEAIGHGLEGDFNRKGSSAFSGRIGQRVAAKGVTVLDD 304
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+A+RRGS+N+DDEGNP+Q LIE+GILKGY+QD MNARLM + TGN RRES+AH+P
Sbjct: 305 GTIADRRGSLNVDDEGNPSQRNVLIEDGILKGYIQDSMNARLMGVKPTGNGRRESYAHLP 364
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G PEEII+S+K GLYA NF GGQVDIT+GKFVFSAS+AY ++NGKI
Sbjct: 365 MPRMTNTYMLGGDKAPEEIIASIKKGLYAPNFGGGQVDITSGKFVFSASEAYWVENGKIQ 424
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
YPVKGATL+G GP LK+VSMIGNDMKLDPGVG CGK+GQ VPVGVGQPTL+ID +TVGG
Sbjct: 425 YPVKGATLVGSGPECLKRVSMIGNDMKLDPGVGTCGKEGQSVPVGVGQPTLRIDGLTVGG 484
Query: 736 T 736
T
Sbjct: 485 T 485
>gi|91776099|ref|YP_545855.1| microcin-processing peptidase 2 [Methylobacillus flagellatus KT]
gi|91710086|gb|ABE50014.1| microcin-processing peptidase 2, Unknown type peptidase, MEROPS
family U62 [Methylobacillus flagellatus KT]
Length = 491
Score = 637 bits (1644), Expect = e-180, Method: Compositional matrix adjust.
Identities = 295/477 (61%), Positives = 384/477 (80%), Gaps = 6/477 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+ A LL P LD L ++GN+ ++VDYAD YFQ+++ E+W LEEG VK+G+FSI
Sbjct: 18 FHTATEALLRPSGLDIGHLQGVIGNIMSHQVDYADLYFQYSRAESWGLEEGQVKSGHFSI 77
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSN--GKIKIIKNIKKIKINS 379
+QGVGVRA+SG+KTAF YSDDIS + A+K + A G+ + + ++++
Sbjct: 78 DQGVGVRAVSGEKTAFAYSDDIS----LPALKQAANAARAIAALGEERQGQAVQRVNAPQ 133
Query: 380 LYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVAD 439
LY D I+S+ K++LLER+E AR DPR+ +V+A+++GEY+V+++ R+DG++ AD
Sbjct: 134 LYLPQDPIASLGAEAKVRLLERLELYARKADPRITQVMASIAGEYEVVMVARHDGVMAAD 193
Query: 440 IRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPA 499
+RPLV+L + +I E+NGRRE G++G GGR++Y YFTD +L+ +V+ AL+NLEA+PA
Sbjct: 194 VRPLVRLSIQVIAEQNGRREQGSAGGGGRFDYRYFTDEVLQDYAQKAVHQALVNLEARPA 253
Query: 500 PAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLA 559
PAG M VVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSN IG+++A+K +T+VD+GT+
Sbjct: 254 PAGSMTVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNAIGQQVAAKGLTVVDDGTII 313
Query: 560 NRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRM 619
NRRGS+NIDDEGNPTQ T LIE+GIL+GY+QD +NARLMNM +TGNARRES+AHIP+PRM
Sbjct: 314 NRRGSLNIDDEGNPTQRTVLIEDGILRGYLQDSLNARLMNMPLTGNARRESYAHIPMPRM 373
Query: 620 TNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVK 679
TNTYMLNG PEEII SVK GLYATNF GGQVDIT+GKFVFSA++A++I++GK+ YPVK
Sbjct: 374 TNTYMLNGNMAPEEIIKSVKRGLYATNFGGGQVDITSGKFVFSAAEAWMIEDGKLAYPVK 433
Query: 680 GATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
GATLIG+GP++L +VSMIGNDM LD GVG CGK+GQ VPVGVGQPTL+ID +TVGGT
Sbjct: 434 GATLIGNGPDVLTRVSMIGNDMALDSGVGTCGKEGQSVPVGVGQPTLRIDGLTVGGT 490
>gi|126439752|ref|YP_001060301.1| TldD/PmbA family protein [Burkholderia pseudomallei 668]
gi|126219245|gb|ABN82751.1| TldD/PmbA family protein [Burkholderia pseudomallei 668]
Length = 498
Score = 637 bits (1644), Expect = e-180, Method: Compositional matrix adjust.
Identities = 311/477 (65%), Positives = 395/477 (82%), Gaps = 2/477 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L++A+ ILL P+ LDE +L + L ++F ++VDYAD YFQ T++E W LEEGIVK+G+FSI
Sbjct: 20 LSLAKDILLTPYGLDEALLTRTLADIFTHRVDYADLYFQATRSEAWSLEEGIVKSGSFSI 79
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKI--IKNIKKIKINS 379
+QGVGVRA++G++TAF YSDD+S + A +T++IA GK KI +K +
Sbjct: 80 DQGVGVRAVAGERTAFAYSDDLSPEAIRQAAVATKAIAAAGGGKQKIRAATALKGVSGRD 139
Query: 380 LYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVAD 439
LY D ++S++ K+KLLERVE++AR +DPR+ +V+A L+GEYDV+L+ R+DG + AD
Sbjct: 140 LYLPADPLASLDAIAKVKLLERVEQMARGRDPRIKQVMAGLAGEYDVVLVARSDGALAAD 199
Query: 440 IRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPA 499
IRPLV++ VT+I E NGRREIG G GGR++Y YFTD +L + V ++V++AL+NL+A+PA
Sbjct: 200 IRPLVRVSVTVIAEHNGRREIGTGGGGGRFDYGYFTDDVLARYVDDAVHAALVNLDARPA 259
Query: 500 PAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLA 559
PAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAF+ IG+++A+K +T+VD+GTL
Sbjct: 260 PAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRIGEQVAAKGVTVVDDGTLP 319
Query: 560 NRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRM 619
NRRGS+NIDDEGNPTQCTTLIE+GILKGY+QD +NARLM M +TGNARRES+A +P+PRM
Sbjct: 320 NRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDTLNARLMKMPVTGNARRESYAALPMPRM 379
Query: 620 TNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVK 679
TNTYMLNG P EII SVK+GLYA NF GGQVDITNGKFVFSAS+AY+I+NGK+TYPVK
Sbjct: 380 TNTYMLNGDKDPREIIESVKHGLYAVNFGGGQVDITNGKFVFSASEAYMIENGKVTYPVK 439
Query: 680 GATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
GATLIG GP LK VSMIGNDM+LD GVGVCGK+GQ VPVGVGQPTL++D++TVGGT
Sbjct: 440 GATLIGSGPESLKYVSMIGNDMRLDTGVGVCGKEGQSVPVGVGQPTLRLDNMTVGGT 496
>gi|410472484|ref|YP_006895765.1| hypothetical protein BN117_1813 [Bordetella parapertussis Bpp5]
gi|408442594|emb|CCJ49146.1| conserved hypothetical protein [Bordetella parapertussis Bpp5]
Length = 486
Score = 636 bits (1640), Expect = e-179, Method: Compositional matrix adjust.
Identities = 297/478 (62%), Positives = 381/478 (79%)
Query: 259 IHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGN 318
I L A+++LL+P+ L E L + LG +F +KVDYAD YFQ+T++E W LEEGIVKTG+
Sbjct: 8 ISALATAKTLLLDPWGLTEADLARALGEIFTHKVDYADLYFQYTRSEGWSLEEGIVKTGS 67
Query: 319 FSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKIN 378
FSI QGVGVRA+SG+KTAF YSD +S + L+++ ++ R IA Q GK+K+ + +
Sbjct: 68 FSIGQGVGVRAVSGEKTAFAYSDSLSADALLSSARTVRGIARQGAGKVKVAVQVPPVDGR 127
Query: 379 SLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVA 438
SLY+ D + ++ +K+ LLER+E++AR +DP VI+V+A L EYDV+L+ +DG + A
Sbjct: 128 SLYADIDPLVTLTAADKVALLERIERMARARDPHVIQVMAGLGAEYDVVLVAGSDGRLAA 187
Query: 439 DIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKP 498
D+RPLV+L +T+I E+NGRRE+G++G GGR YFTD IL V +V+ AL+NLEA+
Sbjct: 188 DVRPLVRLSLTVIAERNGRREMGHAGGGGRTGLAYFTDDILRDYVERAVHEALVNLEARA 247
Query: 499 APAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL 558
APAG M VVLG GWPGILLHEA+GHGLEGDFNRKGSS FS+ IG+R+AS +T++D+GTL
Sbjct: 248 APAGEMTVVLGSGWPGILLHEAVGHGLEGDFNRKGSSVFSDRIGERVASPGVTVIDDGTL 307
Query: 559 ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPR 618
+RRGS+NIDDEGN TQ LIE+GIL+GYMQD +NARLM + TGN RRESFAH+P+PR
Sbjct: 308 PDRRGSLNIDDEGNATQRNVLIEDGILRGYMQDTLNARLMKTAATGNGRRESFAHLPMPR 367
Query: 619 MTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPV 678
MTNTYML G PEEII+SVK GLYA NF GGQVDITNGKFVFSAS+AY+I+NGK+TYPV
Sbjct: 368 MTNTYMLGGATPPEEIIASVKRGLYAVNFGGGQVDITNGKFVFSASEAYMIENGKVTYPV 427
Query: 679 KGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
KGATLIG+GP+ + +VS+IGNDM+LD GVG CGKDGQ VPVGVG PTL+++ +TVGGT
Sbjct: 428 KGATLIGNGPDAMNRVSLIGNDMRLDSGVGTCGKDGQSVPVGVGMPTLRMEGLTVGGT 485
>gi|293604343|ref|ZP_06686750.1| U62 family peptidase 2 TldD [Achromobacter piechaudii ATCC 43553]
gi|292817220|gb|EFF76294.1| U62 family peptidase 2 TldD [Achromobacter piechaudii ATCC 43553]
Length = 486
Score = 635 bits (1638), Expect = e-179, Method: Compositional matrix adjust.
Identities = 294/483 (60%), Positives = 386/483 (79%)
Query: 254 ISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGI 313
I+ I L A+S+LL+P+ L E + + LG +F +KVDYAD YFQ+T++E W LEEGI
Sbjct: 3 ITDPAIASLATAKSLLLDPWGLTEADMARALGEIFTHKVDYADLYFQYTRSEGWSLEEGI 62
Query: 314 VKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIK 373
VKTG+FSI+QGVGVRA+SG+KTAF YSD +S + L+++ + R IA + GK+K+ ++
Sbjct: 63 VKTGSFSISQGVGVRAVSGEKTAFAYSDSLSADALLSSAHAVRGIARRGAGKVKVAAQVE 122
Query: 374 KIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRND 433
SLY+ D +++++ EK+ LLER+E++AR +DP VI+V+A L EYDV+L+ +D
Sbjct: 123 AEMGRSLYADIDPVATLSAPEKVALLERIERMARARDPHVIQVMAGLGAEYDVVLVAGSD 182
Query: 434 GLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALIN 493
G + AD+RPLV+L +T+I E+NGRRE+G++G GGR YFTD +L+ V +V+ A++N
Sbjct: 183 GRLAADVRPLVRLSLTVIAERNGRREMGHAGGGGRLGLAYFTDEMLQGYVERAVHEAMVN 242
Query: 494 LEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIV 553
LEA+PAPAG M VVLG GWPGILLHEA+GHGLEGDFNRKGSS FS IG+R+ASK +T+V
Sbjct: 243 LEARPAPAGEMTVVLGSGWPGILLHEAVGHGLEGDFNRKGSSVFSGRIGERVASKGVTVV 302
Query: 554 DNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAH 613
D+GTL +RRGS+NIDDEGN TQ LIE+GIL+GYMQD +NARLM + TGN RRESFAH
Sbjct: 303 DDGTLPDRRGSLNIDDEGNATQRNVLIEDGILRGYMQDTLNARLMKTAATGNGRRESFAH 362
Query: 614 IPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGK 673
+P+PRMTNTYML G EEI+SSVK GLYA NF GGQVDIT+GKFVFSAS+AY+I++GK
Sbjct: 363 LPMPRMTNTYMLAGDKPAEEIVSSVKRGLYAVNFGGGQVDITSGKFVFSASEAYMIEDGK 422
Query: 674 ITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITV 733
+TYPVKGATLIG+GP+ + +V+MIGND++LD GVG CGKDGQ VPVGVG PT++++ +TV
Sbjct: 423 VTYPVKGATLIGNGPDAMTRVTMIGNDLQLDSGVGTCGKDGQSVPVGVGMPTVRMEGLTV 482
Query: 734 GGT 736
GGT
Sbjct: 483 GGT 485
>gi|421483982|ref|ZP_15931554.1| modulator of DNA gyrase family protein 2 [Achromobacter piechaudii
HLE]
gi|400197689|gb|EJO30653.1| modulator of DNA gyrase family protein 2 [Achromobacter piechaudii
HLE]
Length = 486
Score = 635 bits (1638), Expect = e-179, Method: Compositional matrix adjust.
Identities = 293/478 (61%), Positives = 384/478 (80%)
Query: 259 IHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGN 318
I L A+S+LL+P+ L E + + LG +F +KVDYAD YFQ+T++E W LEEGIVKTG+
Sbjct: 8 IASLATAKSLLLDPWGLTEADMARALGEIFTHKVDYADLYFQYTRSEGWSLEEGIVKTGS 67
Query: 319 FSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKIN 378
FSI+QGVGVRA+SG+KTAF YSD +S + L+++ + R IA + GK+K+ ++
Sbjct: 68 FSISQGVGVRAVSGEKTAFAYSDSLSADALLSSAHAVRGIARRGAGKVKVAAQVEAEMGR 127
Query: 379 SLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVA 438
SLY+ D +++++ EK+ LLER+E++AR +DP VI+V+A L EYDV+L+ +DG + A
Sbjct: 128 SLYADIDPVATLSAPEKVALLERIERMARARDPHVIQVMAGLGAEYDVVLVAGSDGRLAA 187
Query: 439 DIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKP 498
D+RPLV+L +T+I E+NGRRE+G++G GGR YFTD +L+ V +V+ A++NLEA+P
Sbjct: 188 DVRPLVRLSLTVIAERNGRREMGHAGGGGRLGLAYFTDEMLQSYVERAVHEAMVNLEARP 247
Query: 499 APAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL 558
APAG M VVLG GWPGILLHEA+GHGLEGDFNRKGSS FS IG+R+ASK +T+VD+GTL
Sbjct: 248 APAGEMTVVLGSGWPGILLHEAVGHGLEGDFNRKGSSVFSGRIGERVASKGVTVVDDGTL 307
Query: 559 ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPR 618
+RRGS+NIDDEGN TQ LIE+GIL+GYMQD +NARLM + TGN RRESFAH+P+PR
Sbjct: 308 PDRRGSLNIDDEGNATQRNVLIEDGILRGYMQDTLNARLMKTAATGNGRRESFAHLPMPR 367
Query: 619 MTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPV 678
MTNTYML G EEI+SSVK GLYA NF GGQVDIT+GKFVFSAS+AY+I++GK+TYPV
Sbjct: 368 MTNTYMLAGDKPAEEIVSSVKRGLYAVNFGGGQVDITSGKFVFSASEAYMIEDGKVTYPV 427
Query: 679 KGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
KGATLIG+GP+ + +V+MIGND++LD GVG CGKDGQ VPVGVG PT++++ +TVGGT
Sbjct: 428 KGATLIGNGPDAMTRVTMIGNDLQLDSGVGTCGKDGQSVPVGVGMPTVRMEGLTVGGT 485
>gi|422322282|ref|ZP_16403324.1| TldD protein [Achromobacter xylosoxidans C54]
gi|317402791|gb|EFV83335.1| TldD protein [Achromobacter xylosoxidans C54]
Length = 486
Score = 634 bits (1635), Expect = e-179, Method: Compositional matrix adjust.
Identities = 294/478 (61%), Positives = 383/478 (80%)
Query: 259 IHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGN 318
I L A+S+LL+P+ L E + + L +F +KVDYAD YFQ+T++E W LEEGIVKTG+
Sbjct: 8 IASLATAKSLLLDPWGLTEADMARALSEIFTHKVDYADLYFQYTRSEGWSLEEGIVKTGS 67
Query: 319 FSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKIN 378
FSI+QGVGVRA+SG+KTAF YSD +S L+++ + R IA + GK+K+ ++
Sbjct: 68 FSISQGVGVRAVSGEKTAFAYSDSLSPEALLSSAHAVRGIARRGAGKVKVAAQVEAEMGR 127
Query: 379 SLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVA 438
SLY+ D +++++ EK+ LLER+E++AR +DP VI+V+A L EYDV+L+ +DG + A
Sbjct: 128 SLYADIDPVATLSAPEKVALLERIERMARARDPHVIQVMAGLGAEYDVVLVAGSDGRLAA 187
Query: 439 DIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKP 498
D+RPLV+L +T+I E+NGRRE+G++G GGR YFTD +L+ V +V+ A++NLEA+P
Sbjct: 188 DVRPLVRLSLTVIAERNGRREMGHAGGGGRLGLAYFTDEMLQGYVERAVHEAMVNLEARP 247
Query: 499 APAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL 558
APAG M VVLG GWPGILLHEA+GHGLEGDFNRKGSS FS IG+R+ASK +T+VD+GT+
Sbjct: 248 APAGEMTVVLGSGWPGILLHEAVGHGLEGDFNRKGSSVFSGRIGERVASKGVTVVDDGTI 307
Query: 559 ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPR 618
+RRGS+NIDDEGN TQ LIE+GIL+GYMQD +NARLM + TGN RRESFAH+P+PR
Sbjct: 308 PDRRGSLNIDDEGNATQRNVLIEDGILRGYMQDTLNARLMKTAATGNGRRESFAHLPMPR 367
Query: 619 MTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPV 678
MTNTYML G PEEIISSVK GLYA NF GGQVDITNGKFVFSAS+AY+I++GK+TYPV
Sbjct: 368 MTNTYMLAGDKAPEEIISSVKRGLYAVNFGGGQVDITNGKFVFSASEAYMIEDGKVTYPV 427
Query: 679 KGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
KGATLIG+GP+ + +V+MIG+D+KLD GVG CGKDGQ VPVGVG PT++++ +TVGGT
Sbjct: 428 KGATLIGNGPDAMTRVTMIGDDLKLDSGVGTCGKDGQSVPVGVGMPTVRMEGLTVGGT 485
>gi|163857051|ref|YP_001631349.1| TldD protein [Bordetella petrii DSM 12804]
gi|163260779|emb|CAP43081.1| TldD protein homolog [Bordetella petrii]
Length = 486
Score = 634 bits (1634), Expect = e-179, Method: Compositional matrix adjust.
Identities = 293/479 (61%), Positives = 385/479 (80%)
Query: 258 NIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTG 317
+I L A+S+LL+P+ L E + + LG +F +KVDYAD YFQ+T++E W LEEGIVKTG
Sbjct: 7 DIQSLATAKSLLLDPWGLTEADMARALGEIFTHKVDYADLYFQYTRSEGWSLEEGIVKTG 66
Query: 318 NFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKI 377
+FSI QGVGVRAISG+KTAF YSD +S L+++ ++ R IA + GK+K+ +
Sbjct: 67 SFSIGQGVGVRAISGEKTAFAYSDSLSPEALLSSARTVRGIARRGAGKVKVAAQVPPEAG 126
Query: 378 NSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIV 437
SLY+ D +++++ +K+ LLE+VE++AR +DP VI+V+A L EYDV+L+ +DG +
Sbjct: 127 RSLYADLDPLATLSASQKVALLEQVERMARARDPHVIQVMAGLGAEYDVVLVAGSDGRLA 186
Query: 438 ADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAK 497
AD+RPLV+L +T+I E+NGRRE+G++G GGR YF++ IL+ V +V+ A++NL+A+
Sbjct: 187 ADVRPLVRLSLTVIAERNGRREMGHAGGGGRLGLAYFSEDILQGYVERAVHEAMVNLDAR 246
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
PAPAG M VVLG GWPGILLHEA+GHGLEGDFNRKGSS FS IG+R+ASK +T++D+GT
Sbjct: 247 PAPAGEMTVVLGSGWPGILLHEAVGHGLEGDFNRKGSSVFSGRIGQRVASKGVTVIDDGT 306
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
L +RRGS+NIDDEGN TQ LIE+GIL+GYMQD +NARLM TGN RRESFAH+P+P
Sbjct: 307 LPDRRGSLNIDDEGNATQRNVLIEDGILRGYMQDTLNARLMRTGATGNGRRESFAHLPMP 366
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNTYML G+ PEEII+SVK+G+YA NF GGQVDITNGKFVFSAS+AY+I+NGK+TYP
Sbjct: 367 RMTNTYMLAGQTPPEEIIASVKHGIYAANFGGGQVDITNGKFVFSASEAYMIENGKVTYP 426
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
VKGATLIG+GP+ + +VS+IGND++LD GVG CGKDGQ VPVGVG PT+++D +TVGGT
Sbjct: 427 VKGATLIGNGPDAMNRVSLIGNDLQLDSGVGTCGKDGQSVPVGVGMPTVRMDGLTVGGT 485
>gi|311105103|ref|YP_003977956.1| modulator of DNA gyrase family protein 2 [Achromobacter
xylosoxidans A8]
gi|310759792|gb|ADP15241.1| modulator of DNA gyrase family protein 2 [Achromobacter
xylosoxidans A8]
Length = 486
Score = 633 bits (1632), Expect = e-178, Method: Compositional matrix adjust.
Identities = 295/478 (61%), Positives = 383/478 (80%)
Query: 259 IHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGN 318
I L A+S+LL+P+ L E + + LG +F +KVDYAD YFQ+T++E W LEEGIVKTG+
Sbjct: 8 IASLATAKSLLLDPWGLTEADMARALGEIFTHKVDYADLYFQYTRSEGWSLEEGIVKTGS 67
Query: 319 FSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKIN 378
FSI+QGVGVRA+SG+KTAF YSD +S L+++ + R IA + GK+K+ ++
Sbjct: 68 FSISQGVGVRAVSGEKTAFAYSDSLSPEALLSSAHAVRGIARRGAGKVKVAAQVEAEIGR 127
Query: 379 SLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVA 438
SLY+ D +++++ EK+ LLERVE++AR +DP VI+V+A L EYDV+L+ +DG + A
Sbjct: 128 SLYADIDPVATLSAPEKVALLERVERMARARDPHVIQVMAGLGAEYDVVLVAGSDGRLAA 187
Query: 439 DIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKP 498
D+RPLV+L +T+I E+NGRRE+G++G GGR YFTD +L+ V +V+ A++NLEA+P
Sbjct: 188 DVRPLVRLSLTVIAERNGRREMGHAGGGGRLGLAYFTDEMLQGYVERAVHEAMVNLEARP 247
Query: 499 APAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL 558
APAG M VVLG GWPGILLHEA+GHGLEGDFNRKGSS FS IG+R+ASK +T+VD+GT+
Sbjct: 248 APAGEMTVVLGSGWPGILLHEAVGHGLEGDFNRKGSSVFSGRIGERVASKGVTVVDDGTI 307
Query: 559 ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPR 618
+RRGS+NIDDEGN TQ LIE+GIL+GYMQD +NARLM + TGN RRESFAH+P+PR
Sbjct: 308 PDRRGSLNIDDEGNATQRNVLIEDGILRGYMQDTLNARLMKTAATGNGRRESFAHLPMPR 367
Query: 619 MTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPV 678
MTNTYML G EEI+SSVK GLYA NF GGQVDITNGKFVFSAS+AY+I+NGK+TYPV
Sbjct: 368 MTNTYMLAGDKPAEEIVSSVKRGLYAVNFGGGQVDITNGKFVFSASEAYMIENGKVTYPV 427
Query: 679 KGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
KGATLIG+GP+ + +V+MIGND++LD GVG CGKDGQ VPVGVG PT++++ +TVGGT
Sbjct: 428 KGATLIGNGPDAMNRVTMIGNDLQLDSGVGTCGKDGQSVPVGVGMPTVRMEGLTVGGT 485
>gi|319944553|ref|ZP_08018823.1| U62 family peptidase 2 TldD [Lautropia mirabilis ATCC 51599]
gi|319742189|gb|EFV94606.1| U62 family peptidase 2 TldD [Lautropia mirabilis ATCC 51599]
Length = 504
Score = 633 bits (1632), Expect = e-178, Method: Compositional matrix adjust.
Identities = 288/485 (59%), Positives = 382/485 (78%), Gaps = 9/485 (1%)
Query: 261 PLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFS 320
PL +ARS+LLEP LD K L +G +F++KVDYAD YFQ+T++E W L+EGIVK+G+F+
Sbjct: 19 PLAVARSVLLEPHGLDVKDLNGAIGRIFEHKVDYADLYFQYTRSEGWSLDEGIVKSGSFA 78
Query: 321 INQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINS 379
I QGVGVRA+SGD++AF YSD+I+ L++A +TR+IA +G+ ++
Sbjct: 79 IEQGVGVRAVSGDRSAFAYSDEINAQALMSAADATRTIARSGRSGRTRVGDAQAAPARRR 138
Query: 380 --------LYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
LY D I+S+ K+ LL+R+E AR KDPRV +V+A L+ E+DV+++ R
Sbjct: 139 GRRKAPRLLYGMDDPIASMEAAGKVGLLQRIEAYARRKDPRVTQVMAGLAAEHDVVMVMR 198
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
+DG++ AD+RPLV++ V +IVE+NGRRE G++G GGR++ +YF+D V +V AL
Sbjct: 199 SDGVLAADVRPLVRVSVQVIVEQNGRREQGHAGGGGRFDLDYFSDERAFAYVDEAVRQAL 258
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
+NLEA+PAP G++ VVLGPGWPG+LLHEA+GHGLEGDFNRK SS FS IG+R+A+K +T
Sbjct: 259 VNLEARPAPGGVLSVVLGPGWPGVLLHEAVGHGLEGDFNRKKSSVFSGRIGERVAAKGVT 318
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
++D+GTL +RRGS+NIDDEGNPTQ LIE+G+LKGY+QD +NARLM + +TGN RRESF
Sbjct: 319 VLDDGTLPDRRGSLNIDDEGNPTQRNVLIEDGVLKGYLQDSLNARLMKVPVTGNGRRESF 378
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
AH+P+PRMTNT+ML GK P+EI++S++ GLYA NF GGQVDITNGKFVFSAS+AY ++N
Sbjct: 379 AHLPMPRMTNTFMLGGKHEPDEILASLERGLYAVNFGGGQVDITNGKFVFSASEAYWVEN 438
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSI 731
GKI YPVKGAT+IG+GP+ L +V+MIGNDM LDPG+GVCGKDGQ VPVGVGQPTL+I+ +
Sbjct: 439 GKIQYPVKGATIIGNGPDALTRVTMIGNDMSLDPGIGVCGKDGQSVPVGVGQPTLRIEGL 498
Query: 732 TVGGT 736
TVGGT
Sbjct: 499 TVGGT 503
>gi|291614551|ref|YP_003524708.1| peptidase U62 modulator of DNA gyrase [Sideroxydans lithotrophicus
ES-1]
gi|291584663|gb|ADE12321.1| peptidase U62 modulator of DNA gyrase [Sideroxydans lithotrophicus
ES-1]
Length = 478
Score = 632 bits (1631), Expect = e-178, Method: Compositional matrix adjust.
Identities = 298/475 (62%), Positives = 388/475 (81%), Gaps = 2/475 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+ +A+ LL L+ + L ++ G M ++VDYAD YFQ+++ E+W LEEGIVK+G+F+I
Sbjct: 5 MQLAQRALLTEHGLEPRNLEQVFGKMLAHRVDYADLYFQYSRAESWALEEGIVKSGSFNI 64
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QGVGVRA+SG+KTAF YSDDI+ + L +A +TR+IA Q + ++ K + +LY
Sbjct: 65 DQGVGVRAVSGEKTAFAYSDDITLHALEDAALATRAIARQGGKQTAAHMHVGKAR--ALY 122
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
D I+++ +K+ LLE++E++AR DPRV +V+ANL+GEYDVIL+ RNDGL+ ADIR
Sbjct: 123 LPHDPIATLKADDKVALLEKLERMARSLDPRVTQVMANLAGEYDVILVARNDGLMSADIR 182
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPA 501
PLV+L + +IVE NGRRE G++G GGR+ Y+YF+D IL++ +V+ A++NL+A+PAPA
Sbjct: 183 PLVRLSLQVIVESNGRREQGSAGGGGRFGYDYFSDEILQRYAKEAVHQAVVNLDARPAPA 242
Query: 502 GIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANR 561
G M VVLG GWPGILLHEA+GHGLEGDFNRKGSSAFS IG+R+A+K +T+VD+GT+ +R
Sbjct: 243 GNMTVVLGSGWPGILLHEAVGHGLEGDFNRKGSSAFSGRIGERVAAKGVTVVDDGTIKDR 302
Query: 562 RGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTN 621
RGS+N+DDEGNPTQ T LIE+GIL+GY+QD MNARLM + +TGNARRESFAH+PIPRMTN
Sbjct: 303 RGSLNVDDEGNPTQRTVLIEDGILRGYLQDTMNARLMGVPVTGNARRESFAHLPIPRMTN 362
Query: 622 TYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGA 681
T MLNG PEEII+SVK+GLYA NF GGQVDIT+GKFVFS ++AY+I++GKITYPVKGA
Sbjct: 363 TMMLNGDKTPEEIIASVKHGLYAANFGGGQVDITSGKFVFSTTEAYMIEDGKITYPVKGA 422
Query: 682 TLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
TLIG+GP L +VSMIGNDM LDPGVG CGK+GQ VPVGVGQPT++ID +TVGGT
Sbjct: 423 TLIGNGPEALTRVSMIGNDMALDPGVGTCGKEGQSVPVGVGQPTIRIDGLTVGGT 477
>gi|221065155|ref|ZP_03541260.1| peptidase U62 modulator of DNA gyrase [Comamonas testosteroni KF-1]
gi|264680229|ref|YP_003280139.1| peptidase U62, modulator of DNA gyrase [Comamonas testosteroni
CNB-2]
gi|299533102|ref|ZP_07046487.1| peptidase U62, modulator of DNA gyrase [Comamonas testosteroni S44]
gi|418532732|ref|ZP_13098629.1| peptidase U62, modulator of DNA gyrase [Comamonas testosteroni ATCC
11996]
gi|220710178|gb|EED65546.1| peptidase U62 modulator of DNA gyrase [Comamonas testosteroni KF-1]
gi|262210745|gb|ACY34843.1| peptidase U62, modulator of DNA gyrase [Comamonas testosteroni
CNB-2]
gi|298718879|gb|EFI59851.1| peptidase U62, modulator of DNA gyrase [Comamonas testosteroni S44]
gi|371450058|gb|EHN63113.1| peptidase U62, modulator of DNA gyrase [Comamonas testosteroni ATCC
11996]
Length = 486
Score = 632 bits (1631), Expect = e-178, Method: Compositional matrix adjust.
Identities = 297/482 (61%), Positives = 386/482 (80%), Gaps = 2/482 (0%)
Query: 256 QKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVK 315
+ I L AR +LLEPF LDE L + L + ++VD AD YFQ+T+ E W LEEGIVK
Sbjct: 5 EPTIERLATARQLLLEPFGLDETHLARALAEIRSHQVDDADLYFQYTRAEGWSLEEGIVK 64
Query: 316 TGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKI 375
TG+FSI+QGVGVRA+SG+KTAF YSDDIS+ +L++A ++ RSI++ + + ++ +KI
Sbjct: 65 TGSFSIDQGVGVRAVSGEKTAFAYSDDISEASLLDAARTVRSISSATQTR-RVKAGAQKI 123
Query: 376 -KINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDG 434
+ SLY D IS+++ K++LL +VEK+AR KDPRV++V+A L+ EYDV+L+ R DG
Sbjct: 124 AQSRSLYPELDPISTLDSTAKVELLGKVEKLARAKDPRVVQVMAGLASEYDVVLVARADG 183
Query: 435 LIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINL 494
+ AD+RPLV+L VT+I E+ GRRE+G+SG GGR+ YF+D + + V +V++AL+NL
Sbjct: 184 TLAADVRPLVRLSVTVIAEQKGRREVGSSGGGGRFGLAYFSDEQISQYVDEAVHAALVNL 243
Query: 495 EAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVD 554
E++PAPAG+M VVLG GWPG+L HEA+GHGLEGDFNRKGSSAFS IG+R+A+K +T++D
Sbjct: 244 ESRPAPAGVMTVVLGSGWPGVLFHEAVGHGLEGDFNRKGSSAFSGRIGQRVAAKGVTVLD 303
Query: 555 NGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHI 614
+GT+A+RRGS+N+DDEG+ +Q LIE+GILKGY+QD MNARLM + TGN RRES+AHI
Sbjct: 304 DGTIADRRGSLNVDDEGHVSQSNVLIEDGILKGYIQDSMNARLMGVKPTGNGRRESYAHI 363
Query: 615 PIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKI 674
P+PRMTNTYML G P+EII S+K GLYATNF GGQVDIT+GKFVFSAS+AY ++NGKI
Sbjct: 364 PMPRMTNTYMLGGDKDPQEIIGSIKKGLYATNFGGGQVDITSGKFVFSASEAYWVENGKI 423
Query: 675 TYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVG 734
YPVKGAT+IG GP LK +SMIGNDM+LD GVG CGK+GQ VPVGVGQPTL+ID +TVG
Sbjct: 424 QYPVKGATIIGSGPESLKHISMIGNDMRLDSGVGTCGKEGQSVPVGVGQPTLRIDGLTVG 483
Query: 735 GT 736
GT
Sbjct: 484 GT 485
>gi|30249305|ref|NP_841375.1| modulator of DNA gyrase [Nitrosomonas europaea ATCC 19718]
gi|30180624|emb|CAD85237.1| Putative modulator of DNA gyrase [Nitrosomonas europaea ATCC 19718]
Length = 484
Score = 632 bits (1630), Expect = e-178, Method: Compositional matrix adjust.
Identities = 303/482 (62%), Positives = 385/482 (79%), Gaps = 3/482 (0%)
Query: 259 IHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGN 318
+ IA LL P++L+ L + G++ +++DYAD YFQ++++E W+LEEGIVK+G+
Sbjct: 2 MDSFTIADQYLLAPYELNTGRLQDVFGHILTHQIDYADIYFQYSRSEGWVLEEGIVKSGS 61
Query: 319 FSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIK--KIK 376
F+I+QGVGVRAISG+KTAF YSDDIS LI+A ++TR+IA Q G I + +
Sbjct: 62 FNIDQGVGVRAISGEKTAFAYSDDISSQALISAARATRAIAAQGGGTHASITGLSGNDAR 121
Query: 377 INSLY-SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGL 435
+LY S D I+ +KI LER+E AR D RVI+V+A+L+GEY+V+++ R+DGL
Sbjct: 122 QQALYYSSLDPIALCKDADKIGTLERLEGFARTLDKRVIQVMASLAGEYEVVMVARSDGL 181
Query: 436 IVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLE 495
+ AD+RPLV++ + +IVE+NGRRE G +G GGR++Y YFTD IL+ +V+ AL NL
Sbjct: 182 LAADVRPLVRVSLQVIVEENGRREQGVAGGGGRFDYAYFTDAILQDYARKAVHQALTNLA 241
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
++PAPAG M VVLG GWPGILLHEAIGHGLE DFNRKGSSAFS IG+R+A+ +T+VD+
Sbjct: 242 SQPAPAGSMTVVLGSGWPGILLHEAIGHGLEADFNRKGSSAFSGRIGERVAAPGVTVVDD 301
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGS+NIDDEGNPTQCTTLIE+GILKGY+QD +NARLMN +TGN RRESFAHIP
Sbjct: 302 GTIRDRRGSLNIDDEGNPTQCTTLIEDGILKGYLQDNLNARLMNQRVTGNGRRESFAHIP 361
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNT MLNG PEEII+SVK GLYA NF GGQVDIT+GKFVFSA++AY+I+NGKIT
Sbjct: 362 MPRMTNTCMLNGNKEPEEIIASVKQGLYAANFGGGQVDITSGKFVFSAAEAYMIENGKIT 421
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
YPVKGATLIG+GP++L +VSMIGND+ LDPGVG CGK+GQ VPVGVGQPTL+ID +TVGG
Sbjct: 422 YPVKGATLIGNGPDVLTRVSMIGNDLALDPGVGTCGKEGQSVPVGVGQPTLRIDGLTVGG 481
Query: 736 TN 737
TN
Sbjct: 482 TN 483
>gi|187478646|ref|YP_786670.1| protease, modulator of DNA gyrase [Bordetella avium 197N]
gi|115423232|emb|CAJ49764.1| putative protease, modulator of DNA gyrase [Bordetella avium 197N]
Length = 486
Score = 632 bits (1629), Expect = e-178, Method: Compositional matrix adjust.
Identities = 297/478 (62%), Positives = 378/478 (79%)
Query: 259 IHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGN 318
I L A+S+LL+P+ L E L + LG +F +KVDYAD YFQ+T++E W LEEGIVKTG+
Sbjct: 8 IQSLATAKSLLLDPWGLTEADLARALGEIFAHKVDYADLYFQYTRSEGWSLEEGIVKTGS 67
Query: 319 FSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKIN 378
FSI QGVGVRAISG+KTAF YSD +S L+++ ++ R IA Q GK+K+
Sbjct: 68 FSIGQGVGVRAISGEKTAFAYSDSLSPEALLSSARTVRGIARQGAGKVKVAAYRPADDGR 127
Query: 379 SLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVA 438
SLY+ D +++++ +K+ LLER+E +AR +DP +I+V+A L EYDV+L+ +DG + A
Sbjct: 128 SLYADIDPLATLSAADKVALLERLEGLARARDPHIIQVMAGLGAEYDVVLVAGSDGRLAA 187
Query: 439 DIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKP 498
D+RPLV+L +T+I E+NGRRE+G++G GGR +YF+D IL V +V+ A+ NLEA+P
Sbjct: 188 DVRPLVRLSLTVIAERNGRREMGHAGGGGRSGLDYFSDEILRDYVERAVHEAMTNLEARP 247
Query: 499 APAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL 558
APAG M VVLG GWPGILLHEA+GHGLEGDFNRKGSS FS IG+R+ASK +T++D+GTL
Sbjct: 248 APAGEMPVVLGSGWPGILLHEAVGHGLEGDFNRKGSSIFSGRIGQRVASKGVTVIDDGTL 307
Query: 559 ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPR 618
RRGS+NIDDEGN +Q LIE+GIL+GYMQD +NARLM TGN RRESFAH+P+PR
Sbjct: 308 QGRRGSLNIDDEGNASQRNVLIEDGILRGYMQDTLNARLMKTQATGNGRRESFAHLPMPR 367
Query: 619 MTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPV 678
MTNTYML G PEEII+SVK GLYA NF GGQVDIT+GKFVFSAS+AY+I+NGK+TYPV
Sbjct: 368 MTNTYMLGGDKVPEEIIASVKKGLYAVNFGGGQVDITSGKFVFSASEAYMIENGKVTYPV 427
Query: 679 KGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
KGATLIG+GP+ + +VSMIGNDM+LD GVG CGK+GQ VPVGVG PTL++D +TVGGT
Sbjct: 428 KGATLIGNGPDAMNRVSMIGNDMRLDSGVGTCGKEGQSVPVGVGMPTLRMDGLTVGGT 485
>gi|452124411|ref|ZP_21936995.1| protease, modulator of DNA gyrase [Bordetella holmesii F627]
gi|452127803|ref|ZP_21940383.1| protease, modulator of DNA gyrase [Bordetella holmesii H558]
gi|451923641|gb|EMD73782.1| protease, modulator of DNA gyrase [Bordetella holmesii F627]
gi|451926672|gb|EMD76805.1| protease, modulator of DNA gyrase [Bordetella holmesii H558]
Length = 486
Score = 631 bits (1628), Expect = e-178, Method: Compositional matrix adjust.
Identities = 298/478 (62%), Positives = 380/478 (79%)
Query: 259 IHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGN 318
I L A+S+LL+P+ L E L + LG +F +KVDYAD YFQ+T++E W LEEGIVKTG+
Sbjct: 8 IQSLATAKSLLLDPWGLTEADLARALGEIFAHKVDYADLYFQYTRSEGWSLEEGIVKTGS 67
Query: 319 FSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKIN 378
FSI QGVGVRAISG+KTAF YSD +S L+++ + R IA Q GK+K+ +
Sbjct: 68 FSIGQGVGVRAISGEKTAFAYSDSLSPEALLSSAHTVRGIARQGAGKVKVAAHRPVQDSR 127
Query: 379 SLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVA 438
SLY+ D +++++ +K+ LLER+E++AR++DP VI+V+A L EYDVIL+ +DG + A
Sbjct: 128 SLYADIDPLATLSAPDKVALLERLERMARVRDPHVIQVMAGLDAEYDVILVAGSDGRLAA 187
Query: 439 DIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKP 498
D+RPLV+L +T+I E+NGRRE+G++G GGR YF+D IL V +V+ A++NLEA+
Sbjct: 188 DVRPLVRLSLTVIAERNGRREMGHAGGGGRSGLEYFSDEILRDYVERAVHEAMVNLEARA 247
Query: 499 APAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL 558
APAG M VVLG GWPGILLHEA+GHGLEGDFNRKGSS FS IG+R+ASK +T++D+GTL
Sbjct: 248 APAGEMPVVLGSGWPGILLHEAVGHGLEGDFNRKGSSVFSGRIGQRVASKGVTVIDDGTL 307
Query: 559 ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPR 618
RRGS+NIDDEGN +Q LIE+GIL+GYMQD +NARLM TGN RRESFAH+P+PR
Sbjct: 308 LGRRGSLNIDDEGNASQRNVLIEDGILRGYMQDTLNARLMKTQATGNGRRESFAHLPMPR 367
Query: 619 MTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPV 678
MTNTYML+G PEEII+SVK GLYA NF GGQVDIT+GKFVFSAS+AY+I+NGK+TYPV
Sbjct: 368 MTNTYMLSGDKVPEEIIASVKKGLYAVNFGGGQVDITSGKFVFSASEAYMIENGKVTYPV 427
Query: 679 KGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
KGATLIG+GP+ + +VSMIGNDM+LD GVG CGK+GQ VPVGVG PTL++D +TVGGT
Sbjct: 428 KGATLIGNGPDAMNRVSMIGNDMRLDSGVGTCGKEGQSVPVGVGMPTLRMDGLTVGGT 485
>gi|332530685|ref|ZP_08406616.1| peptidase u62 modulator of DNA gyrase [Hylemonella gracilis ATCC
19624]
gi|332039853|gb|EGI76248.1| peptidase u62 modulator of DNA gyrase [Hylemonella gracilis ATCC
19624]
Length = 490
Score = 631 bits (1628), Expect = e-178, Method: Compositional matrix adjust.
Identities = 302/487 (62%), Positives = 387/487 (79%), Gaps = 8/487 (1%)
Query: 256 QKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVK 315
+ + L +AR +LL PF LDE LL+ L + ++VD AD YFQ+T++E W LEEGIVK
Sbjct: 5 EPTLERLAVARELLLTPFGLDESHLLRALSEIRAHRVDDADLYFQYTRSEGWSLEEGIVK 64
Query: 316 TGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKK- 374
TG+FSI+QGVGVRA+SG+KTAF YSDDIS+ +L++A ++ RSIA + GK +K ++
Sbjct: 65 TGSFSIDQGVGVRAVSGEKTAFAYSDDISEASLLDAARTVRSIA--AAGKSARVKAAERK 122
Query: 375 -IKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRND 433
SLY D I++++ K+ LLE+VEK+AR KDPRV++V+A L+GEYDV+L+ R D
Sbjct: 123 IAGSRSLYPGADPIATLDSTAKVALLEKVEKLARAKDPRVVQVMAGLAGEYDVVLVARAD 182
Query: 434 GLIVADIRPLVQLFVTIIVEKNG----RREIGNSGCGGRYNYNYFTDMILEKCVSNSVNS 489
G + AD+RPLV+L VT+I E+N RRE+G+SG GGR+ YF + + + V +V++
Sbjct: 183 GTLAADVRPLVRLSVTVIAEQNVNGAVRREMGSSGGGGRFGLAYFDEETITRYVDEAVSA 242
Query: 490 ALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKE 549
AL NLE++PAPAG M VVLG GWPGILLHEAIGHGLEGDFNRKGSSAFS IG+R+A+K
Sbjct: 243 ALTNLESRPAPAGEMTVVLGSGWPGILLHEAIGHGLEGDFNRKGSSAFSGRIGQRVAAKG 302
Query: 550 ITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRE 609
+T++D+GT+A+RRGS+N+DDEGNP+Q LIE+GILKGY+QD MNARLM + TGN RRE
Sbjct: 303 VTVLDDGTIADRRGSLNVDDEGNPSQRNVLIEDGILKGYIQDSMNARLMKTAPTGNGRRE 362
Query: 610 SFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYII 669
S+AHIP+PRMTNTYML G PEEI++S+ GLYATNF GGQVDITNGKFVFSAS+AY +
Sbjct: 363 SYAHIPMPRMTNTYMLGGDKTPEEIVASIDRGLYATNFGGGQVDITNGKFVFSASEAYWV 422
Query: 670 KNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKID 729
+ GKI YPVKGATL+G+GP+ L +VSMIGNDM+LD GVG CGK+GQ VPVGVGQPTL+ID
Sbjct: 423 EKGKILYPVKGATLVGNGPDALTRVSMIGNDMRLDSGVGTCGKEGQSVPVGVGQPTLRID 482
Query: 730 SITVGGT 736
+TVGGT
Sbjct: 483 GLTVGGT 489
>gi|121609149|ref|YP_996956.1| peptidase U62, modulator of DNA gyrase [Verminephrobacter eiseniae
EF01-2]
gi|121553789|gb|ABM57938.1| microcin-processing peptidase 2. Unknown type peptidase. MEROPS
family U62 [Verminephrobacter eiseniae EF01-2]
Length = 496
Score = 631 bits (1628), Expect = e-178, Method: Compositional matrix adjust.
Identities = 290/477 (60%), Positives = 383/477 (80%), Gaps = 4/477 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+++AR++LL PF LDE L + L + ++VD AD YFQ+T++E W LEEGIVKTG+FSI
Sbjct: 21 IDVARALLLTPFGLDEGHLARALAEIRSHRVDDADLYFQYTRSEGWSLEEGIVKTGSFSI 80
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSN-GKIKIIKNIKKIKIN-S 379
+QGVGVRA+SG++TAF YSDDIS +L++A ++ RSI++Q+ G++++ KKI S
Sbjct: 81 DQGVGVRAVSGERTAFAYSDDISAASLLDAARTVRSISSQAQAGRLRVAS--KKIAAGRS 138
Query: 380 LYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVAD 439
LY D I+S++ K+ LLE++E+ AR KD RV++V+A L+ EYDV+L+ R DG + AD
Sbjct: 139 LYPGLDPIASLDSSAKVALLEKIERRARAKDRRVVQVMAGLASEYDVVLVARADGTLAAD 198
Query: 440 IRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPA 499
+RPLV+L VT+IVE++GRRE+G +G GGR++ F D +++ V +V++AL+NL ++ A
Sbjct: 199 LRPLVRLSVTVIVERHGRREMGTAGGGGRFDLARFDDAQMDRYVDEAVHAALVNLRSRAA 258
Query: 500 PAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLA 559
PAG M VVLGPGWPGILLHEAIGHGLEGDFNRKG+SAFS IG+R+A+K +T++D+GT+A
Sbjct: 259 PAGEMTVVLGPGWPGILLHEAIGHGLEGDFNRKGASAFSGRIGQRVAAKGVTVLDDGTIA 318
Query: 560 NRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRM 619
RRGS+NIDDEG+ +Q LIE+GIL+ Y+QD +NARLM + TGN RRES+AHIP+PRM
Sbjct: 319 ERRGSLNIDDEGHASQRNVLIEDGILRAYIQDSLNARLMGCAPTGNGRRESYAHIPMPRM 378
Query: 620 TNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVK 679
TNTYML G P EII+S+K GLYA NF GGQVDIT+GKFVFSAS+AY ++NGKI YPVK
Sbjct: 379 TNTYMLGGDKEPAEIIASIKKGLYARNFGGGQVDITSGKFVFSASQAYWVENGKIQYPVK 438
Query: 680 GATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
GAT+IG GP LKKV++IGNDM+LD GVG CGK GQ VPVGVGQPTL+I+ +TVGGT
Sbjct: 439 GATIIGSGPEALKKVTLIGNDMRLDSGVGTCGKAGQSVPVGVGQPTLRIEGLTVGGT 495
>gi|347819502|ref|ZP_08872936.1| peptidase U62, modulator of DNA gyrase [Verminephrobacter
aporrectodeae subsp. tuberculatae At4]
Length = 509
Score = 631 bits (1627), Expect = e-178, Method: Compositional matrix adjust.
Identities = 291/476 (61%), Positives = 378/476 (79%), Gaps = 2/476 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
++IAR +LL PF LDE L + L + ++VD AD YFQ+T++E W LEEGIVKTG+FSI
Sbjct: 34 IDIARELLLTPFGLDEGHLARALAEIRAHQVDDADLYFQYTRSEGWGLEEGIVKTGSFSI 93
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSI-ANQSNGKIKIIKNIKKIKINSL 380
QGVGVRA+SG+KTAF YSDDI + L++A ++ RSI A G++++ + K SL
Sbjct: 94 EQGVGVRAVSGEKTAFAYSDDICEAALLDAARTVRSICAAAQAGRVRVARP-KLAAGRSL 152
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y D I+S++ K+ LLE++E+ AR KDPRV +V+A L+ EYDV+L+ R DG + AD+
Sbjct: 153 YPGVDPIASLDSTAKVALLEKLERRARAKDPRVTQVMAGLASEYDVVLVARADGTLAADV 212
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAP 500
RPLV+L VT+I E+ GRRE G +G GGR++ + F D +++ V ++V +AL NL+A+PAP
Sbjct: 213 RPLVRLSVTVIAEQGGRREQGFAGGGGRFDLSCFDDAQIDRYVDDAVQAALTNLQARPAP 272
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG M VVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFS +G+R+A++ +T++D+G++A
Sbjct: 273 AGEMTVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSGRVGQRVAARGVTVLDDGSIAE 332
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+NIDDEG+ +Q LIE+GILKGY+QD +NARLM ++ TGN RRES+AHIP+PRMT
Sbjct: 333 RRGSLNIDDEGHASQSNVLIEDGILKGYLQDTLNARLMGVAPTGNGRRESYAHIPMPRMT 392
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYM G P EII+S+K GLYA+NF GGQVDIT+GKFVFSAS+AY ++NGKI YPVKG
Sbjct: 393 NTYMRGGDRDPAEIIASIKKGLYASNFGGGQVDITSGKFVFSASEAYWVENGKIEYPVKG 452
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
A++IG GP LKKVSMIGNDM+LD GVG CGK+GQ VPVGVGQPTL+I+ +TVGGT
Sbjct: 453 ASIIGSGPEALKKVSMIGNDMRLDSGVGTCGKEGQSVPVGVGQPTLRIEGLTVGGT 508
>gi|359798605|ref|ZP_09301176.1| modulator of DNA gyrase family protein 2 [Achromobacter
arsenitoxydans SY8]
gi|359363427|gb|EHK65153.1| modulator of DNA gyrase family protein 2 [Achromobacter
arsenitoxydans SY8]
Length = 486
Score = 631 bits (1627), Expect = e-178, Method: Compositional matrix adjust.
Identities = 293/478 (61%), Positives = 383/478 (80%)
Query: 259 IHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGN 318
I L A+S+LL+P+ L E + + LG +F +KVDYAD YFQ+T++E W LEEGIVKTG+
Sbjct: 8 IASLATAKSLLLDPWGLTEADMARALGEIFTHKVDYADLYFQYTRSEGWSLEEGIVKTGS 67
Query: 319 FSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKIN 378
FSI+QGVGVRA+SG+KTAF YSD +S L+++ + R IA + GK+K+ ++
Sbjct: 68 FSISQGVGVRAVSGEKTAFAYSDSLSPEALLSSAHAVRGIARRGAGKVKVAAQVEAEIGR 127
Query: 379 SLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVA 438
SLY+ D +++++ EK+ LLERVE++AR +DP VI+V+A L EYDV+L+ +DG + A
Sbjct: 128 SLYADIDPVATLSAPEKVALLERVERMARARDPHVIQVMAGLGAEYDVVLVAGSDGRLAA 187
Query: 439 DIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKP 498
D+RPLV+L +T+I E+NGRRE+G++G GGR YFTD +L+ V +V+ A++NLEA+P
Sbjct: 188 DVRPLVRLSLTVIAERNGRREMGHAGGGGRLGLAYFTDEMLQGYVERAVHEAMVNLEARP 247
Query: 499 APAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL 558
APAG M VVLG GWPGILLHEA+GHGLEGDFNRKGSS FS IG+R+ASK +T+VD+GT+
Sbjct: 248 APAGEMTVVLGSGWPGILLHEAVGHGLEGDFNRKGSSVFSGRIGERVASKGVTVVDDGTI 307
Query: 559 ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPR 618
+RRGS+NIDDEGN TQ LIE+GIL+GYMQD +NARLM + TGN RRESFAH+P+PR
Sbjct: 308 PDRRGSLNIDDEGNATQRNVLIEDGILRGYMQDTLNARLMKTAATGNGRRESFAHLPMPR 367
Query: 619 MTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPV 678
MTNTYML G EEI++SVK GLYA NF GGQVDITNGKFVFSAS+AY+I++GK+TYPV
Sbjct: 368 MTNTYMLAGDKPAEEIVASVKRGLYAVNFGGGQVDITNGKFVFSASEAYMIEDGKVTYPV 427
Query: 679 KGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
KGATLIG+GP+ + +V+MIGND++LD GVG CGKDGQ VPVGVG PT++++ +TVGGT
Sbjct: 428 KGATLIGNGPDAMNRVTMIGNDLQLDSGVGTCGKDGQSVPVGVGMPTVRMEGLTVGGT 485
>gi|114331258|ref|YP_747480.1| C69 family peptidase [Nitrosomonas eutropha C91]
gi|114308272|gb|ABI59515.1| microcin-processing peptidase 2, Unknown type peptidase, MEROPS
family U62 [Nitrosomonas eutropha C91]
Length = 483
Score = 630 bits (1626), Expect = e-178, Method: Compositional matrix adjust.
Identities = 302/476 (63%), Positives = 389/476 (81%), Gaps = 2/476 (0%)
Query: 264 IARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQ 323
IA LL P++L+ L + G + +++DYAD YFQ++++E W+LEEGIVK+G+FSI+Q
Sbjct: 7 IADQYLLAPYELNPTRLQDVFGQILSHRIDYADIYFQYSRSEGWVLEEGIVKSGSFSIDQ 66
Query: 324 GVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSLYS 382
GVGVRAISG+KTAF YSDDIS LI+A ++TR+IA Q S + +I+ I +LY
Sbjct: 67 GVGVRAISGEKTAFAYSDDISGQALISAARATRAIAAQGSEKQTRIMGLSGNITRQALYY 126
Query: 383 FT-DTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ D I+ +KI+LLER+E+ AR D RVI+V+A+L+GEY+VI++ R+DGL+ AD+R
Sbjct: 127 PSLDPIALCQDADKIRLLERLEEFARALDKRVIQVMASLAGEYEVIMVARSDGLLAADVR 186
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPA 501
PLV++ + +IVE++G+RE G +G GGR++Y YFTD +L+ +V+ A+ NL +KPAPA
Sbjct: 187 PLVRVSLQVIVEESGQREQGVAGGGGRFDYGYFTDTVLQDYAHKAVHQAITNLVSKPAPA 246
Query: 502 GIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANR 561
G M VVLG GWPGILLHEAIGHGLE DFNRKGSSAFS IG+R+A+ +T+VD+GT+ +R
Sbjct: 247 GSMTVVLGNGWPGILLHEAIGHGLEADFNRKGSSAFSGRIGERVAAPGVTVVDDGTIRDR 306
Query: 562 RGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTN 621
RGS+NIDDEGNPTQCT LIE+GILKGY+QD +NARLMN ++TGN RRESFAHIP+PRMTN
Sbjct: 307 RGSLNIDDEGNPTQCTVLIEDGILKGYLQDNLNARLMNQAVTGNGRRESFAHIPMPRMTN 366
Query: 622 TYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGA 681
T MLNG PEEII+SVK+GLYA NF GGQVDIT+GKFVFSA++AY+I+NGKITYPVKGA
Sbjct: 367 TCMLNGDKEPEEIIASVKHGLYAANFGGGQVDITSGKFVFSAAEAYMIENGKITYPVKGA 426
Query: 682 TLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
TLIG+GP++L +VSMIGNDM LDPGVG CGK+GQ VPVGVGQPTL++D +TVGGTN
Sbjct: 427 TLIGNGPDVLTRVSMIGNDMALDPGVGTCGKEGQSVPVGVGQPTLRVDGLTVGGTN 482
>gi|395005992|ref|ZP_10389845.1| putative Zn-dependent protease-like protein [Acidovorax sp. CF316]
gi|394316055|gb|EJE52804.1| putative Zn-dependent protease-like protein [Acidovorax sp. CF316]
Length = 494
Score = 630 bits (1625), Expect = e-178, Method: Compositional matrix adjust.
Identities = 297/476 (62%), Positives = 384/476 (80%), Gaps = 2/476 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+++AR +LL PF LDE L + L + ++VD AD YFQ+T++E W LEEGIVKTG+FSI
Sbjct: 19 IDVARQLLLAPFGLDESHLARALAEIRTHQVDDADLYFQYTRSEGWSLEEGIVKTGSFSI 78
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSN-GKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KTAF YSDDIS+ +L++A ++ R+I S G++K+ K SL
Sbjct: 79 DQGVGVRAVSGEKTAFAYSDDISEASLLDAARTVRTIGAASQAGRVKVASQ-KIATSRSL 137
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y D I+S++ K+ LLER+EK AR KDPRV +V+A L+ EYDV+L+ R DG + AD+
Sbjct: 138 YPGVDPIASLDSTAKVALLERLEKRARAKDPRVAQVMAGLASEYDVVLVARADGTLAADV 197
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAP 500
RPLV+L VT+I E+NGRRE+G++G GGR+ YF D + + V +VN+AL+NLE++PAP
Sbjct: 198 RPLVRLSVTVIAEQNGRREMGSAGGGGRFGLAYFDDEQMGQYVDEAVNAALVNLESRPAP 257
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG M VVLG GWPGILLHEAIGHGLEGDFNRKGSSAFS +G+R+A+K +T++D+GT+A+
Sbjct: 258 AGEMTVVLGSGWPGILLHEAIGHGLEGDFNRKGSSAFSGRVGQRVAAKGVTVLDDGTIAD 317
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+N+DDEGN +Q LIE+GILKGY+QD MNARLM ++ TGN RRES+AHIP+PRMT
Sbjct: 318 RRGSLNVDDEGNASQRNVLIEDGILKGYIQDSMNARLMGVAPTGNGRRESYAHIPMPRMT 377
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYML G P+EI++S+K GLYA+NF GGQVDIT+GKFVFSAS+AY ++NGKI YPVKG
Sbjct: 378 NTYMLGGDKDPQEIVASIKKGLYASNFGGGQVDITSGKFVFSASEAYWVENGKIQYPVKG 437
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
AT+IG GP LKKV++IGNDM+LD GVG CGK+GQ VPVGVGQPTL+I+ +TVGGT
Sbjct: 438 ATIIGSGPESLKKVTLIGNDMRLDSGVGTCGKEGQSVPVGVGQPTLRIEGLTVGGT 493
>gi|160896934|ref|YP_001562516.1| peptidase U62 modulator of DNA gyrase [Delftia acidovorans SPH-1]
gi|160362518|gb|ABX34131.1| peptidase U62 modulator of DNA gyrase [Delftia acidovorans SPH-1]
Length = 486
Score = 629 bits (1622), Expect = e-177, Method: Compositional matrix adjust.
Identities = 296/482 (61%), Positives = 385/482 (79%), Gaps = 2/482 (0%)
Query: 256 QKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVK 315
+ I L AR +LLEPF LDE L + L + ++VD AD YFQ+T+ E W LEEGIVK
Sbjct: 5 EPTIERLATARQLLLEPFGLDETHLARALAEIRSHQVDDADLYFQYTRAEGWSLEEGIVK 64
Query: 316 TGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKI 375
TG+FSI+QGVGVRA+SG+KTAF YSDDIS+ +L++A ++ RSI+ + K ++ N KI
Sbjct: 65 TGSFSIDQGVGVRAVSGEKTAFAYSDDISEASLLDAARTVRSISGAAQSK-RVRANAPKI 123
Query: 376 -KINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDG 434
+ SLY D I++++ K++LL +VEK+AR KDPRV++V+A L+ EYDV+L+ R DG
Sbjct: 124 AQSRSLYPGLDPIATLDSTAKVELLGKVEKLARAKDPRVVQVMAGLASEYDVVLVARADG 183
Query: 435 LIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINL 494
+ AD+RPLV+L VT+I E+ GRRE+G++G GGR+ YF+D + + V +V++AL NL
Sbjct: 184 TLAADVRPLVRLSVTVIAEQKGRREVGSAGGGGRFGLAYFSDEQITQYVDEAVSAALTNL 243
Query: 495 EAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVD 554
E++PAPAG M VVLGPGWPG+LLHEA+GHGLEGDFNRKG+SAFS IG+R+A+K +T++D
Sbjct: 244 ESRPAPAGEMTVVLGPGWPGVLLHEAVGHGLEGDFNRKGASAFSGRIGQRVAAKGVTVLD 303
Query: 555 NGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHI 614
+GTLA+RRGS+N+DDEG +Q LIE+GILKGY+QD MNARLM + TGN RRES+AHI
Sbjct: 304 DGTLADRRGSLNVDDEGCTSQSNVLIEDGILKGYIQDAMNARLMGVKPTGNGRRESYAHI 363
Query: 615 PIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKI 674
P+PRMTNTYML G P+EI++S+K GLYATNF GGQVDIT+GKFVFSAS+AY ++NGKI
Sbjct: 364 PMPRMTNTYMLGGDREPQEIVASIKKGLYATNFGGGQVDITSGKFVFSASEAYWVENGKI 423
Query: 675 TYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVG 734
YPVKGAT++G GP LK ++MIGNDM+LD GVG CGK+GQ VPVGVGQPTL+ID +TVG
Sbjct: 424 QYPVKGATIVGSGPESLKHITMIGNDMRLDSGVGTCGKEGQSVPVGVGQPTLRIDGLTVG 483
Query: 735 GT 736
GT
Sbjct: 484 GT 485
>gi|442770223|gb|AGC70945.1| TldD protein [uncultured bacterium A1Q1_fos_1050]
Length = 490
Score = 629 bits (1622), Expect = e-177, Method: Compositional matrix adjust.
Identities = 296/487 (60%), Positives = 379/487 (77%), Gaps = 2/487 (0%)
Query: 252 ILISQK-NIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILE 310
++IS++ + L +ARS+LLEPF LDE+ L + L ++ ++VD AD YFQ+T++E W LE
Sbjct: 3 VMISREPTLERLAVARSVLLEPFGLDERHLRQALSDICAHRVDDADLYFQYTRSEGWSLE 62
Query: 311 EGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIK 370
EGIVKTG+FSI+QGVGVRA+SG++TAF YSDDIS +L++A ++ RSIA + +
Sbjct: 63 EGIVKTGSFSIDQGVGVRAVSGERTAFAYSDDISLPSLLDAARTVRSIAKAGGQGRQRVG 122
Query: 371 NIKKIK-INSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILI 429
+KI SLY D I++++ K+KLLE VE+ AR +DPRV++V+A L+ EYDV+LI
Sbjct: 123 GRRKIAPARSLYGGADPIATLDSTAKVKLLETVEQRARARDPRVVQVMAGLASEYDVVLI 182
Query: 430 TRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNS 489
R DG + AD+RPLV+L +T+I E+NGRRE+G+SG G R F D + V +V +
Sbjct: 183 ARADGTLAADVRPLVRLSLTVIAEQNGRREMGSSGGGARLGLAMFDDERINTYVDEAVGA 242
Query: 490 ALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKE 549
AL NLEA+PAPAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAFS IG+R+A+K
Sbjct: 243 ALTNLEARPAPAGEMNVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFSGRIGQRVAAKG 302
Query: 550 ITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRE 609
+T++D+GTL RRGS+N+DDEG TQ LIE+GILK Y+QD +NARLM TGN RRE
Sbjct: 303 VTVLDDGTLPERRGSLNVDDEGCATQRNVLIEDGILKAYIQDSLNARLMKRKPTGNGRRE 362
Query: 610 SFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYII 669
S+AH+P+PRMTNTYML G P+EI++S+ GLYATNF GGQVDIT+GKFVFSAS+AY +
Sbjct: 363 SYAHVPMPRMTNTYMLGGGRDPQEIVASLDRGLYATNFGGGQVDITSGKFVFSASEAYWV 422
Query: 670 KNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKID 729
+ GKI YPVKGATLIG GP LK+V++IGNDM LD GVG CGK+GQ VPVGVGQPTL+ID
Sbjct: 423 EKGKIQYPVKGATLIGSGPEALKRVTLIGNDMALDSGVGTCGKEGQSVPVGVGQPTLRID 482
Query: 730 SITVGGT 736
+TVGGT
Sbjct: 483 GLTVGGT 489
>gi|333916640|ref|YP_004490372.1| peptidase U62 modulator of DNA gyrase [Delftia sp. Cs1-4]
gi|333746840|gb|AEF92017.1| peptidase U62 modulator of DNA gyrase [Delftia sp. Cs1-4]
Length = 486
Score = 629 bits (1621), Expect = e-177, Method: Compositional matrix adjust.
Identities = 296/482 (61%), Positives = 386/482 (80%), Gaps = 2/482 (0%)
Query: 256 QKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVK 315
+ I L AR +LLEPF LDE L + L + ++VD AD YFQ+T+ E W LEEGIVK
Sbjct: 5 EPTIERLATARQLLLEPFGLDETHLARALAEIRSHQVDDADLYFQYTRAEGWSLEEGIVK 64
Query: 316 TGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKI 375
TG+FSI+QGVGVRA+SG+KTAF YSDDIS+ +L++A ++ RSI+ + K ++ N KI
Sbjct: 65 TGSFSIDQGVGVRAVSGEKTAFAYSDDISEASLLDAARTVRSISGAAQSK-RVRANAPKI 123
Query: 376 -KINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDG 434
+ SLY D I++++ K++LL +VEK+AR KDPRV++V+A L+ EYDV+L+ R DG
Sbjct: 124 AQSRSLYPGLDPIATLDSTAKVELLGKVEKLARAKDPRVVQVMAGLASEYDVVLVARADG 183
Query: 435 LIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINL 494
+ AD+RPLV+L VT+I E+ GRRE+G++G GGR+ YF+D + + V+ +V++AL NL
Sbjct: 184 TLAADVRPLVRLSVTVIAEQKGRREVGSAGGGGRFGLAYFSDEQITQYVNEAVSAALTNL 243
Query: 495 EAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVD 554
E++PAPAG M VVLGPGWPG+LLHEA+GHGLEGDFNRKG+SAFS IG+R+A+K +T++D
Sbjct: 244 ESRPAPAGEMTVVLGPGWPGVLLHEAVGHGLEGDFNRKGASAFSGRIGQRVAAKGVTVLD 303
Query: 555 NGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHI 614
+GTLA+RRGS+N+DDEG +Q LIE+GILKGY+QD MNARLM + TGN RRES+AHI
Sbjct: 304 DGTLADRRGSLNVDDEGCTSQSNVLIEDGILKGYIQDAMNARLMGVKPTGNGRRESYAHI 363
Query: 615 PIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKI 674
P+PRMTNTYML G P+EI++S+K GLYATNF GGQVDIT+GKFVFSAS+AY ++NGKI
Sbjct: 364 PMPRMTNTYMLGGDREPQEIVASIKKGLYATNFGGGQVDITSGKFVFSASEAYWVENGKI 423
Query: 675 TYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVG 734
YPVKGAT++G GP LK ++MIGNDM+LD GVG CGK+GQ VPVGVGQPTL+ID +TVG
Sbjct: 424 QYPVKGATIVGSGPESLKHITMIGNDMRLDSGVGTCGKEGQSVPVGVGQPTLRIDGLTVG 483
Query: 735 GT 736
GT
Sbjct: 484 GT 485
>gi|365091846|ref|ZP_09329135.1| peptidase U62, modulator of DNA gyrase [Acidovorax sp. NO-1]
gi|363415859|gb|EHL22984.1| peptidase U62, modulator of DNA gyrase [Acidovorax sp. NO-1]
Length = 494
Score = 628 bits (1620), Expect = e-177, Method: Compositional matrix adjust.
Identities = 300/477 (62%), Positives = 387/477 (81%), Gaps = 4/477 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+++AR +LL PF LDE+ L + L + +KVD AD YFQ+T++E W LEEGIVKTG+FSI
Sbjct: 19 IDVARELLLTPFGLDERHLARALAEIRTHKVDDADLYFQYTRSEGWSLEEGIVKTGSFSI 78
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSI-ANQSNGKIKIIKNIKKIKIN-S 379
+QGVGVRA+SG+KTAF YSDDIS+ +L++A ++ RSI A +GK +I K++ S
Sbjct: 79 DQGVGVRAVSGEKTAFAYSDDISEASLLDAARTVRSISAAAQDGKARIAP--KRVAAGRS 136
Query: 380 LYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVAD 439
LY D I+S++ K+ LLE++E+ AR KDPRV +V+A L+ EYDV+L+ R DG + AD
Sbjct: 137 LYPGVDPIASLDSTAKVALLEKLEQRARAKDPRVAQVMAGLASEYDVVLVARADGTLAAD 196
Query: 440 IRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPA 499
+RPLV+L VT+I E+NGRRE+G++G GGR+ YF D + K V +VN+AL+NLE++PA
Sbjct: 197 VRPLVRLSVTVIAEQNGRREMGSAGGGGRFGLAYFDDEQMGKYVDEAVNAALVNLESRPA 256
Query: 500 PAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLA 559
PAG M VVLG GWPGILLHEAIGHGLEGDFNRKGSSAFS IG+R+A+K +T++D+GT+A
Sbjct: 257 PAGEMTVVLGSGWPGILLHEAIGHGLEGDFNRKGSSAFSGRIGQRVAAKGVTVLDDGTIA 316
Query: 560 NRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRM 619
+RRGS+N+DDEG+ +Q LIE+GILKGY+QD +NARLM ++ TGN RRES+AHIP+PRM
Sbjct: 317 DRRGSLNVDDEGHASQRNVLIEDGILKGYIQDSLNARLMGVAPTGNGRRESYAHIPMPRM 376
Query: 620 TNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVK 679
TNTYML G P+EII+S+K GLYA+NF GGQVDIT+GKFVFSAS+AY ++NGKI YPVK
Sbjct: 377 TNTYMLGGDKDPQEIIASIKKGLYASNFGGGQVDITSGKFVFSASEAYWVENGKIQYPVK 436
Query: 680 GATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
GAT+IG GP LKKV+MIGNDM+LD GVG CGK+GQ VPVGVGQPTL+I+ +TVGGT
Sbjct: 437 GATIIGSGPESLKKVTMIGNDMRLDSGVGTCGKEGQSVPVGVGQPTLRIEGLTVGGT 493
>gi|121606288|ref|YP_983617.1| C69 family peptidase [Polaromonas naphthalenivorans CJ2]
gi|120595257|gb|ABM38696.1| microcin-processing peptidase 2, Unknown type peptidase, MEROPS
family U62 [Polaromonas naphthalenivorans CJ2]
Length = 508
Score = 628 bits (1619), Expect = e-177, Method: Compositional matrix adjust.
Identities = 298/476 (62%), Positives = 384/476 (80%), Gaps = 2/476 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L IA+ +LL PF LDE L + LG + VD AD YFQ+T++E W LEEGIVKTG+FSI
Sbjct: 33 LAIAQKLLLAPFGLDEAALSRALGEITSYGVDDADLYFQYTRSEGWSLEEGIVKTGSFSI 92
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSI-ANQSNGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KTAF YSDDIS+ +L++A ++ RSI A +G++K K SL
Sbjct: 93 DQGVGVRAVSGEKTAFAYSDDISEASLLDAARTVRSISAAAKSGRVKTPAR-KVASSRSL 151
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y D I++++ K++LL +VEK+A+ KDPR+++V+A L+ EYDV+++ R DG + AD+
Sbjct: 152 YRDLDPIATLDSTAKVELLGKVEKLAKAKDPRIVQVMAGLASEYDVVMVARADGTLAADV 211
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAP 500
RPLV+L VT+I E+ GRRE+G+SG GGR+ YF D + + V +VN+AL NL+A+PAP
Sbjct: 212 RPLVRLSVTVIAEQKGRREVGSSGGGGRFGLAYFDDTQIAQYVDAAVNAALTNLDARPAP 271
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG M VVLG GWPGILLHEAIGHGLEGDFNRKGSSAFS IG+R+A+K +T++D+GT+A+
Sbjct: 272 AGQMTVVLGSGWPGILLHEAIGHGLEGDFNRKGSSAFSGRIGERVAAKGVTVLDDGTIAD 331
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+NIDDEGN +Q LIE+GILKGY+QD MNARLMN+ TGN RRES+AH+P+PRMT
Sbjct: 332 RRGSLNIDDEGNVSQRNVLIEDGILKGYIQDSMNARLMNVKPTGNGRRESYAHVPMPRMT 391
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYML G PEEII+S+K GLYA+NF+GGQVDIT+GKFVFSAS+A+ ++NGKI YPVKG
Sbjct: 392 NTYMLGGDKAPEEIIASIKKGLYASNFAGGQVDITSGKFVFSASEAFWVENGKILYPVKG 451
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
AT++G+GP+ L +V+MIGNDMKLD GVG CGK+GQ VPVGVGQPTL+ID +TVGGT
Sbjct: 452 ATIVGNGPDALTRVTMIGNDMKLDSGVGTCGKEGQSVPVGVGQPTLRIDGLTVGGT 507
>gi|407940672|ref|YP_006856313.1| C69 family peptidase [Acidovorax sp. KKS102]
gi|407898466|gb|AFU47675.1| peptidase U62, modulator of DNA gyrase [Acidovorax sp. KKS102]
Length = 494
Score = 628 bits (1619), Expect = e-177, Method: Compositional matrix adjust.
Identities = 300/477 (62%), Positives = 386/477 (80%), Gaps = 4/477 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+++AR +LL PF LDE L + L + ++VD AD YFQ+T++E W LEEGIVKTG+FSI
Sbjct: 19 IDVARELLLTPFGLDEGHLARALAEIRTHQVDDADLYFQYTRSEGWSLEEGIVKTGSFSI 78
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSI-ANQSNGKIKIIKNIKKIKIN-S 379
+QGVGVRA+SG+KTAF YSDDIS+ +L++A ++ RSI A GK ++ KK+ + S
Sbjct: 79 DQGVGVRAVSGEKTAFAYSDDISEASLLDAARTVRSISAAAQAGKARVAP--KKVAASRS 136
Query: 380 LYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVAD 439
LY D I+S++ K+ LLER+E+ AR KDPRV +V+A L+ EYDV+L+ R DG + AD
Sbjct: 137 LYPGVDPIASLDSTAKVALLERLEQRARAKDPRVAQVMAGLASEYDVVLVARADGTLAAD 196
Query: 440 IRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPA 499
+RPLV+L VT+I E+NGRRE+G++G GGR+ YF D + K V +VN+AL+NLE++PA
Sbjct: 197 VRPLVRLSVTVIAEQNGRREMGSAGGGGRFGLAYFDDEQMGKYVDEAVNAALVNLESRPA 256
Query: 500 PAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLA 559
PAG M VVLG GWPGILLHEAIGHGLEGDFNRKGSSAFS IG+R+A+K +T++D+GT+A
Sbjct: 257 PAGEMTVVLGSGWPGILLHEAIGHGLEGDFNRKGSSAFSGRIGQRVAAKGVTVLDDGTIA 316
Query: 560 NRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRM 619
+RRGS+N+DDEG+ +Q LIE+GILKGY+QD +NARLM ++ TGN RRES+AHIP+PRM
Sbjct: 317 DRRGSLNVDDEGHASQRNVLIEDGILKGYIQDSLNARLMGVAPTGNGRRESYAHIPMPRM 376
Query: 620 TNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVK 679
TNTYML G P+EII+S+K GLYA+NF GGQVDIT+GKFVFSAS+AY ++NGKI YPVK
Sbjct: 377 TNTYMLGGDKDPQEIIASIKKGLYASNFGGGQVDITSGKFVFSASEAYWVENGKIQYPVK 436
Query: 680 GATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
GAT+IG GP LKKV+MIGNDM+LD GVG CGK+GQ VPVGVGQPTL+I+ +TVGGT
Sbjct: 437 GATIIGSGPESLKKVTMIGNDMRLDSGVGTCGKEGQSVPVGVGQPTLRIEGLTVGGT 493
>gi|301632909|ref|XP_002945522.1| PREDICTED: protein tldD-like [Xenopus (Silurana) tropicalis]
Length = 486
Score = 627 bits (1618), Expect = e-177, Method: Compositional matrix adjust.
Identities = 291/481 (60%), Positives = 381/481 (79%)
Query: 256 QKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVK 315
+ I L AR +LL+PF LDE L + L M ++VD AD YFQ+T++E W LEEGIVK
Sbjct: 5 EPTIERLATARQLLLQPFGLDESHLAQALAEMRAHRVDDADLYFQYTRSEGWSLEEGIVK 64
Query: 316 TGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKI 375
TG+FSI+QGVGVRA+SG+KTAF YSDDIS +L++A ++ R+I+ K
Sbjct: 65 TGSFSIDQGVGVRAVSGEKTAFAYSDDISAASLLDAARTVRAISATGKAGRARAATQKIA 124
Query: 376 KINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGL 435
K SLY+ D I++++ K++LLE+VE+ AR +DPRV++V+A L+ EYDV+L+ R DG
Sbjct: 125 KSRSLYAEIDPIATLDSTAKVQLLEKVEQRARAQDPRVVQVMAGLASEYDVVLVARADGT 184
Query: 436 IVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLE 495
+ AD+RPLV+L VT+I ++ RRE+G++G GGR+ F D + + V +VN+AL+NLE
Sbjct: 185 LAADVRPLVRLSVTVIAQQGRRREMGSAGGGGRFGLACFDDAQIAQYVHEAVNAALVNLE 244
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
++PAPAG M VVLGPGWPG+LLHEA+GHGLEGDFNRKGSSAFS+ IG+R+A+K +T++D+
Sbjct: 245 SRPAPAGEMTVVLGPGWPGVLLHEAVGHGLEGDFNRKGSSAFSDRIGQRVAAKGVTVLDD 304
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTL RRGS+N+DDEG+ +QC LIE+GILKGY+QD +NARLM ++ TGN RRES+AHIP
Sbjct: 305 GTLRQRRGSLNVDDEGHASQCNVLIEDGILKGYIQDALNARLMGVTPTGNGRRESYAHIP 364
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G P+EI++S+K GLYATNF GGQVDIT+GKFVFSAS+AY ++NGK+
Sbjct: 365 MPRMTNTYMLGGGKDPQEIVASIKKGLYATNFGGGQVDITSGKFVFSASEAYWVENGKVL 424
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
YPVKGAT++G GP LKK+SMIGNDM+LD GVG CGK+GQ VPVGVGQPTL+ID +TVGG
Sbjct: 425 YPVKGATIVGSGPESLKKISMIGNDMRLDSGVGTCGKEGQSVPVGVGQPTLRIDGLTVGG 484
Query: 736 T 736
T
Sbjct: 485 T 485
>gi|312795180|ref|YP_004028102.1| Microcin-processing peptidase 2 (TldD) [Burkholderia rhizoxinica
HKI 454]
gi|312166955|emb|CBW73958.1| Microcin-processing peptidase 2 (TldD) [Burkholderia rhizoxinica
HKI 454]
Length = 506
Score = 626 bits (1615), Expect = e-176, Method: Compositional matrix adjust.
Identities = 314/485 (64%), Positives = 393/485 (81%), Gaps = 2/485 (0%)
Query: 254 ISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGI 313
I + NI L IA+ +LL + LDE IL++ LG +F ++VDYAD YFQ T++E W LEEGI
Sbjct: 21 IIEPNIRHLAIAKDLLLTRYGLDEAILVRTLGEIFSHRVDYADLYFQTTRSEAWSLEEGI 80
Query: 314 VKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKI--IKN 371
VK+G+FSI+QGVGVRA++G++TAF YSDD+S L A ++TR+IA GK ++
Sbjct: 81 VKSGSFSIDQGVGVRAVAGERTAFAYSDDLSPQALAQAAQATRAIARAGGGKTRVRAAGA 140
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
++ + LY D + S++ K+ LLERVEK+AR KDPR+ +V+A L+GEYDV+L+ R
Sbjct: 141 LRGVAGRDLYLPADPLHSLDANAKVALLERVEKMARAKDPRITQVMAGLAGEYDVVLVAR 200
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
+DG + AD+RPLV++ VT+I E+NGRREIG G GGRY+Y YFTD ++ + V ++V++AL
Sbjct: 201 SDGALAADVRPLVRVSVTVIAEQNGRREIGTGGGGGRYDYGYFTDEVMTRYVDDAVHAAL 260
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
+NLEA+PAPAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAF+ IG+R+A+ +T
Sbjct: 261 VNLEARPAPAGTMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRIGERVAANGVT 320
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD+GTLANRRGS+NIDDEGNPTQCTTLIE+GIL GYMQD +NARLM M ITGNARRES+
Sbjct: 321 VVDDGTLANRRGSLNIDDEGNPTQCTTLIEDGILTGYMQDTLNARLMKMKITGNARRESY 380
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A +P+PRMTNTYML G P EII+SV +GLYA NF GGQVDITNGKFVFSAS+AY+I+N
Sbjct: 381 AALPMPRMTNTYMLGGDKDPAEIIASVNHGLYAVNFGGGQVDITNGKFVFSASEAYMIEN 440
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSI 731
GKI YPVKGATL+G GP LK VS+IGNDM LD GVGVCGK+GQ VPVGVGQPTL+ID +
Sbjct: 441 GKIAYPVKGATLVGSGPESLKYVSLIGNDMSLDTGVGVCGKEGQSVPVGVGQPTLRIDRM 500
Query: 732 TVGGT 736
TVGGT
Sbjct: 501 TVGGT 505
>gi|89902138|ref|YP_524609.1| peptidase U62, modulator of DNA gyrase [Rhodoferax ferrireducens
T118]
gi|89346875|gb|ABD71078.1| microcin-processing peptidase 2. Unknown type peptidase. MEROPS
family U62 [Rhodoferax ferrireducens T118]
Length = 490
Score = 625 bits (1613), Expect = e-176, Method: Compositional matrix adjust.
Identities = 296/485 (61%), Positives = 388/485 (80%), Gaps = 4/485 (0%)
Query: 256 QKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVK 315
+ + L +A+S+LL PF LDE L + L + ++VD AD YFQ+T++E W LEEGIVK
Sbjct: 5 EPTLERLGLAKSLLLTPFGLDESHLAQALKEIKAHQVDEADLYFQYTRSEGWSLEEGIVK 64
Query: 316 TGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKI 375
TG+FSI+QGVGVRA+SG+KTAF YSDDIS+++L++A ++ RSI+ + + + K
Sbjct: 65 TGSFSIDQGVGVRAVSGEKTAFAYSDDISESSLLDAARTVRSISALAQTRRARVATKKIA 124
Query: 376 KINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGL 435
SLY D I++++ K+KLLERVE++AR KDPRV +V+A ++ EYDV+L+ R DG+
Sbjct: 125 YGRSLYPGLDPITTLDSAAKVKLLERVEQLARAKDPRVAQVMAGVASEYDVVLVARADGM 184
Query: 436 IVADIRPLVQLFVTIIVEKNG----RREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
+ AD+RPLV+L VT+I E+ RRE+G++G GGR+ YF + ++ + V +V +AL
Sbjct: 185 LAADVRPLVRLSVTVIAEQGVGGKVRREMGSAGGGGRFGLAYFDEALITQYVDEAVKAAL 244
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
INLEA+PAPAG M VVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFS +G+R+A+K +T
Sbjct: 245 INLEARPAPAGEMTVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSGRVGQRVAAKGVT 304
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
++D+GT+A+RRGS+N+DDEGN + LIE+GILKGYMQD MNARLM ++ TGN RRES+
Sbjct: 305 VLDDGTIADRRGSLNVDDEGNTSARNVLIEDGILKGYMQDAMNARLMGVAPTGNGRRESY 364
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
AH+PIPRMTNTYML G P+EI++S+K GLYATNF GGQVDIT+GKFVFSAS+AY ++N
Sbjct: 365 AHVPIPRMTNTYMLAGDKSPDEIVASIKKGLYATNFGGGQVDITSGKFVFSASEAYWVEN 424
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSI 731
GKI YPVKGAT++G GP++LK+VSMIGND+KLD GVG CGK+GQ VPVGVGQPTL+ID +
Sbjct: 425 GKILYPVKGATIVGSGPDVLKRVSMIGNDLKLDSGVGTCGKEGQSVPVGVGQPTLRIDGL 484
Query: 732 TVGGT 736
TVGGT
Sbjct: 485 TVGGT 489
>gi|351732720|ref|ZP_08950411.1| peptidase U62, modulator of DNA gyrase [Acidovorax radicis N35]
Length = 494
Score = 625 bits (1612), Expect = e-176, Method: Compositional matrix adjust.
Identities = 299/477 (62%), Positives = 385/477 (80%), Gaps = 4/477 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+++AR +LL PF LDE L + L + ++VD AD YFQ+T++E W LEEGIVKTG+FSI
Sbjct: 19 IDVARELLLTPFGLDESHLARALAEIRTHQVDDADLYFQYTRSEGWSLEEGIVKTGSFSI 78
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSI-ANQSNGKIKIIKNIKKIKIN-S 379
+QGVGVRA+SG+KTAF YSDDIS+ +L++A ++ RSI A GK+++ KK+ S
Sbjct: 79 DQGVGVRAVSGEKTAFAYSDDISEASLLDAARTVRSISAVAQAGKVRVAP--KKVAAGRS 136
Query: 380 LYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVAD 439
LY D I+S++ K+ LLE++E+ AR KDPRV +V+A L+ EYDV+L+ R DG + AD
Sbjct: 137 LYPGVDPIASLDSTAKVALLEKLEQRARAKDPRVAQVMAGLASEYDVVLVARADGTLAAD 196
Query: 440 IRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPA 499
+RPLV+L VT+I E+NGRRE+G++G GGR+ YF D + K V +VN+AL+NLE++PA
Sbjct: 197 VRPLVRLSVTVIAEQNGRREMGSAGGGGRFGLAYFDDEQMGKYVDEAVNAALVNLESRPA 256
Query: 500 PAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLA 559
PAG M VVLG GWPGILLHEAIGHGLEGDFNRKGSSAFS IG+R+A+K +T++D+GT+A
Sbjct: 257 PAGEMTVVLGSGWPGILLHEAIGHGLEGDFNRKGSSAFSGRIGQRVAAKGVTVLDDGTIA 316
Query: 560 NRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRM 619
+RRGS+N+DDEG+ +Q LIE+GILKGY+QD +NARLM ++ TGN RRES+AHIP+PRM
Sbjct: 317 DRRGSLNVDDEGHASQRNVLIEDGILKGYIQDSLNARLMGVAPTGNGRRESYAHIPMPRM 376
Query: 620 TNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVK 679
TNTYML G P EII+S+K GLYA+NF GGQVDIT+GKFVFSAS+AY ++NGKI YPVK
Sbjct: 377 TNTYMLGGDKDPAEIIASIKKGLYASNFGGGQVDITSGKFVFSASEAYWVENGKIQYPVK 436
Query: 680 GATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
GAT+IG GP LKKV+MIGNDM+LD GVG CGK+GQ VPVGVGQPTL+I+ +TVGGT
Sbjct: 437 GATIIGSGPESLKKVTMIGNDMRLDSGVGTCGKEGQSVPVGVGQPTLRIEGLTVGGT 493
>gi|337278624|ref|YP_004618095.1| TldD protein [Ramlibacter tataouinensis TTB310]
gi|334729700|gb|AEG92076.1| candidate TldD protein [Ramlibacter tataouinensis TTB310]
Length = 486
Score = 625 bits (1611), Expect = e-176, Method: Compositional matrix adjust.
Identities = 290/481 (60%), Positives = 383/481 (79%)
Query: 256 QKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVK 315
+ + L A+ +LLEPF LDE L + L + ++VD AD YFQ+T++E W LEEGIVK
Sbjct: 5 EPTLERLATAQRLLLEPFGLDETHLSRALAEITAHQVDDADLYFQYTRSEGWSLEEGIVK 64
Query: 316 TGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKI 375
TG+FSI+QGVGVRA+SG+KTAF YSDDIS+ +L++A ++ RSI+ + + K
Sbjct: 65 TGSFSIDQGVGVRAVSGEKTAFAYSDDISEASLLDAARTVRSISAAARSGRARVAPRKVA 124
Query: 376 KINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGL 435
+LY D I++++ K+KLLE+ EK+AR +DPR+ +V+A L+ E+DV+++ R DG
Sbjct: 125 SSRTLYEGLDPIATLDSTAKVKLLEKAEKLARARDPRIAQVMAGLASEWDVVMVARADGT 184
Query: 436 IVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLE 495
+ AD+RPLV+L VT+I E+NGRRE+G+SG GGR+ YF D + V+++V +AL NLE
Sbjct: 185 LAADVRPLVRLSVTVIAEQNGRREVGSSGGGGRFGLAYFDDERINTYVNDAVRAALTNLE 244
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
++PAPAG M VVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFS IGKR+A+K +T++D+
Sbjct: 245 SRPAPAGEMTVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSGRIGKRVAAKGVTVLDD 304
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+A+RRGS+N+DDEGN +Q LIE+GIL+GY+QD +NARLM + TGN RRES+AHIP
Sbjct: 305 GTIADRRGSLNVDDEGNASQRNVLIEDGILRGYIQDSLNARLMGVKPTGNGRRESYAHIP 364
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G P+EI++S+K GLYATNF GGQVDIT+GKFVFSAS+A+ ++NGKI
Sbjct: 365 MPRMTNTYMLGGDKAPQEIVASIKKGLYATNFGGGQVDITSGKFVFSASEAFWVENGKIL 424
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
YPVKGAT++G+GP+ L +V+MIG+DMKLD GVG CGK+GQ VPVGVGQPTL+ID +TVGG
Sbjct: 425 YPVKGATIVGNGPDALTRVTMIGDDMKLDSGVGTCGKEGQSVPVGVGQPTLRIDGLTVGG 484
Query: 736 T 736
T
Sbjct: 485 T 485
>gi|149927213|ref|ZP_01915470.1| Peptidase U62, modulator of DNA gyrase [Limnobacter sp. MED105]
gi|149824152|gb|EDM83373.1| Peptidase U62, modulator of DNA gyrase [Limnobacter sp. MED105]
Length = 489
Score = 625 bits (1611), Expect = e-176, Method: Compositional matrix adjust.
Identities = 301/482 (62%), Positives = 380/482 (78%), Gaps = 3/482 (0%)
Query: 259 IHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGN 318
I L IA+S+L P+ +DE + K G +F +KVD+AD YFQ+ E W L+EGIVK+G+
Sbjct: 8 ISNLAIAQSLLWTPYGIDEGHIQKAFGEIFSHKVDFADLYFQYGCIEGWSLDEGIVKSGS 67
Query: 319 FSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIAN---QSNGKIKIIKNIKKI 375
++I QGVGVRA+SGDKTAF YSDDI+ ++ A KS R IA+ +N +K K
Sbjct: 68 YNIEQGVGVRAVSGDKTAFAYSDDIAFKPILAAAKSVREIASLGKTANRNLKTGKGFAGA 127
Query: 376 KINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGL 435
+ +LYS + I ++ EK+ LL+R+E+ AR +D RV +V+AN+ G YDV+L+ R+DG+
Sbjct: 128 ESRALYSPLNPIPTLTSTEKVDLLKRLEQFARKRDKRVKQVMANIVGAYDVVLVARSDGV 187
Query: 436 IVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLE 495
+ AD+RPLV++ V+++VE+ GRRE G+SG GGRY++ +F D L +V+ ALINLE
Sbjct: 188 LAADVRPLVRVNVSVVVEQKGRRETGSSGAGGRYDFGHFNDAFLMHHAHTAVDQALINLE 247
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A+PAPAG+ VVLG GWPGILLHEAIGHGLEGDFNRKGSSAFS IG+R+A+K +TIVD+
Sbjct: 248 ARPAPAGLQTVVLGSGWPGILLHEAIGHGLEGDFNRKGSSAFSGMIGQRVAAKGVTIVDD 307
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTLA+RRGS+NIDDEGN TQCTTLIE+GILKGY+QDI NARLM M +TGN RRESFAH+P
Sbjct: 308 GTLASRRGSLNIDDEGNKTQCTTLIEDGILKGYIQDITNARLMKMPVTGNGRRESFAHLP 367
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYMLNG PEEII+SVK+G+YA NF GGQVDIT+GKFVFSAS AY I+NGKIT
Sbjct: 368 MPRMTNTYMLNGDKTPEEIIASVKDGVYAVNFGGGQVDITSGKFVFSASLAYKIENGKIT 427
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
YP+KGATLIG+GP L K+SM+GNDM LD GVG CGK+GQ VPVGVGQPTL+ID + +GG
Sbjct: 428 YPLKGATLIGNGPESLTKISMVGNDMALDDGVGTCGKEGQSVPVGVGQPTLRIDGLVMGG 487
Query: 736 TN 737
T
Sbjct: 488 TQ 489
>gi|326315598|ref|YP_004233270.1| peptidase U62 modulator of DNA gyrase [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323372434|gb|ADX44703.1| peptidase U62 modulator of DNA gyrase [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 486
Score = 623 bits (1606), Expect = e-175, Method: Compositional matrix adjust.
Identities = 296/481 (61%), Positives = 381/481 (79%)
Query: 256 QKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVK 315
+ I L+IAR +LLEPF LDE L + L ++ ++VD AD YFQ+T++E W LEEGIVK
Sbjct: 5 EPTIERLSIARQLLLEPFGLDETHLARALSDIRAHRVDDADLYFQYTRSEGWSLEEGIVK 64
Query: 316 TGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKI 375
TG+FSI+QGVGVRA+SG+KTAF YSDDIS+ +L +A + RSIA + + K
Sbjct: 65 TGSFSIDQGVGVRAVSGEKTAFAYSDDISEASLRDAAHTVRSIAAAAQQGRAKVAARKVA 124
Query: 376 KINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGL 435
SLY D I++++ K+ LLE+VE+ AR KDPRV +V+A L+ EYDV+L+ R DG
Sbjct: 125 ASRSLYPDLDPITTLDSTAKVALLEKVEQRARAKDPRVAQVMAGLASEYDVVLVARADGT 184
Query: 436 IVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLE 495
+ AD+RPLV+L +T+I E+ GRRE+G++G GGR+ YF D + + V +VN+AL+NLE
Sbjct: 185 LAADVRPLVRLSLTVIAEQGGRREMGSAGGGGRFGLAYFDDGQIGRYVDEAVNAALVNLE 244
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A+PAPAG M VVLGPGWPGILLHEA+GHGLEGDFNRKGSSAFS IG+R+A+K +T++D+
Sbjct: 245 ARPAPAGEMTVVLGPGWPGILLHEAVGHGLEGDFNRKGSSAFSGRIGQRVAAKGVTVLDD 304
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+A+RRGS+N+DDEG+ +Q LIE+GIL+GY+QD +NARLM ++ TGN RRES+AHIP
Sbjct: 305 GTIADRRGSLNVDDEGHASQRNVLIEDGILRGYIQDSLNARLMGVAPTGNGRRESYAHIP 364
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G P EI++S++ GLYATNF GGQVDIT+GKFVFSAS+AY ++NGKI
Sbjct: 365 MPRMTNTYMLGGDKDPAEIVASIQRGLYATNFGGGQVDITSGKFVFSASEAYWVENGKIL 424
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
YPVKGAT++G GP LK+VSMIGNDM LD GVG CGK+GQ VPVGVGQPTL+ID +TVGG
Sbjct: 425 YPVKGATIVGSGPESLKRVSMIGNDMALDSGVGTCGKEGQSVPVGVGQPTLRIDGLTVGG 484
Query: 736 T 736
T
Sbjct: 485 T 485
>gi|120609544|ref|YP_969222.1| microcin-processing peptidase 2 [Acidovorax citrulli AAC00-1]
gi|120588008|gb|ABM31448.1| microcin-processing peptidase 2 [Acidovorax citrulli AAC00-1]
Length = 486
Score = 622 bits (1604), Expect = e-175, Method: Compositional matrix adjust.
Identities = 294/481 (61%), Positives = 382/481 (79%)
Query: 256 QKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVK 315
+ I L+IAR +LLEPF LDE L + L ++ ++VD AD YFQ+T++E W LEEGIVK
Sbjct: 5 EPTIERLSIARRLLLEPFGLDETHLARALSDIRAHRVDDADLYFQYTRSEGWSLEEGIVK 64
Query: 316 TGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKI 375
TG+FSI+QGVGVRA+SG+KTAF YSDDIS+ +L +A ++ RSIA + + K
Sbjct: 65 TGSFSIDQGVGVRAVSGEKTAFAYSDDISEASLRDAARTVRSIAAAAQQGRAKVAARKVA 124
Query: 376 KINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGL 435
SLY D I++++ K+ LLE+VE+ AR KDPRV +V+A L+ EYDV+L+ R DG
Sbjct: 125 ASRSLYPDLDPIATLDSTAKVALLEKVEQRARAKDPRVAQVMAGLASEYDVVLVARADGT 184
Query: 436 IVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLE 495
+ AD+RPLV+L +T+I E+ GRRE+G++G GGR+ YF D + + V +VN+AL+NL+
Sbjct: 185 LAADVRPLVRLSLTVIAEQGGRREMGSAGGGGRFGLAYFDDGQIGRYVDEAVNAALVNLD 244
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A+PAPAG M VVLGPGWPGILLHEA+GHGLEGDFNRKGSSAFS IG+R+A++ +T++D+
Sbjct: 245 ARPAPAGEMTVVLGPGWPGILLHEAVGHGLEGDFNRKGSSAFSGRIGQRVAARGVTVLDD 304
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+A+RRGS+N+DDEG+ +Q LIE+GIL+GY+QD +NARLM ++ TGN RRES+AHIP
Sbjct: 305 GTIADRRGSLNVDDEGHASQRNVLIEDGILRGYIQDSLNARLMGVAPTGNGRRESYAHIP 364
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G P EI++S++ GLYATNF GGQVDIT+GKFVFSAS+AY ++NGKI
Sbjct: 365 MPRMTNTYMLGGDKDPAEIVASIQRGLYATNFGGGQVDITSGKFVFSASEAYWVENGKIL 424
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
YPVKGAT++G GP LK+VSMIGNDM LD GVG CGK+GQ VPVGVGQPTL+ID +TVGG
Sbjct: 425 YPVKGATIVGSGPESLKRVSMIGNDMALDSGVGTCGKEGQSVPVGVGQPTLRIDGLTVGG 484
Query: 736 T 736
T
Sbjct: 485 T 485
>gi|424776335|ref|ZP_18203317.1| protease, modulator of DNA gyrase [Alcaligenes sp. HPC1271]
gi|422888433|gb|EKU30821.1| protease, modulator of DNA gyrase [Alcaligenes sp. HPC1271]
Length = 486
Score = 621 bits (1601), Expect = e-175, Method: Compositional matrix adjust.
Identities = 285/478 (59%), Positives = 375/478 (78%)
Query: 259 IHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGN 318
I+ L AR +LLEP+ L+E L LG +F ++ DYAD YFQ+T++E W L+EGIVK+G+
Sbjct: 8 INALECARGLLLEPWGLNESHLSGALGEIFTHQADYADLYFQYTRSEGWALDEGIVKSGS 67
Query: 319 FSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKIN 378
FSI QGVGVRA+SG+KTAF YSD +S L+++ + RSIA Q I +
Sbjct: 68 FSIEQGVGVRALSGEKTAFAYSDSLSPEALLSSARVVRSIARQGGSGKSGILVPADTQRP 127
Query: 379 SLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVA 438
+LY+ TD I+S+ EK+ LL R++ +AR DPRV++V+A+L EYDV+L+ +DG + A
Sbjct: 128 TLYTGTDPIASLPAPEKVALLGRLDALARAADPRVVQVMASLGAEYDVVLVAGSDGRLAA 187
Query: 439 DIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKP 498
D+RPLV L +++IVE+NGRRE G++ GGR + +YF+D +L V +V SA+ NLEAKP
Sbjct: 188 DVRPLVHLSLSVIVEQNGRRERGSAAGGGRVDLSYFSDDMLRSYVDKAVRSAMTNLEAKP 247
Query: 499 APAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL 558
APAG M VVLGPGWPG++LHEA+GHGLEGDFNR+GSS FS IG+R+ASK +T++D+GTL
Sbjct: 248 APAGQMTVVLGPGWPGVMLHEAVGHGLEGDFNRRGSSLFSGRIGQRVASKGVTVIDDGTL 307
Query: 559 ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPR 618
NRRGS+N+DDEGN TQ T LIE+GILKGY+QD NARLM +ITGN RRES+A +P+PR
Sbjct: 308 ENRRGSLNMDDEGNATQRTVLIEDGILKGYLQDTHNARLMGAAITGNGRRESYASLPLPR 367
Query: 619 MTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPV 678
MTNT+ML G P+EII+SVK GLYA +F GGQVDIT+GKFVFSAS+A++I+NGK+ YPV
Sbjct: 368 MTNTFMLGGDKDPQEIIASVKKGLYAVDFGGGQVDITSGKFVFSASEAWVIENGKLMYPV 427
Query: 679 KGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
KGATLIG GP+ + ++SMIGNDM+LD GVG CGK+GQ VPVGVG PT++++++TVGGT
Sbjct: 428 KGATLIGSGPDAMNQISMIGNDMQLDSGVGTCGKEGQSVPVGVGIPTVRMENLTVGGT 485
>gi|393759450|ref|ZP_10348265.1| protease, modulator of DNA gyrase [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
gi|393162339|gb|EJC62398.1| protease, modulator of DNA gyrase [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
Length = 486
Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust.
Identities = 288/479 (60%), Positives = 378/479 (78%), Gaps = 2/479 (0%)
Query: 259 IHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGN 318
I+ L AR +LLEP+ L E L LG +F ++ DYAD YFQ+T++E W L+EGIVK+G+
Sbjct: 8 INALECARGLLLEPWGLHESHLSGALGEIFTHQADYADLYFQYTRSEGWSLDEGIVKSGS 67
Query: 319 FSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKI 377
FSI QGVGVRA+SG+KTAF YSD +S L+++ + RSIA Q +GK I+ +
Sbjct: 68 FSIEQGVGVRALSGEKTAFAYSDSLSPEALLSSARVVRSIARQGGSGKSGILVPADSQRA 127
Query: 378 NSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIV 437
+LY+ TD I+S+ EK+ LL R++ +AR D RV++V+A+L EYDV+L+ +DG +
Sbjct: 128 -TLYTGTDPIASLPAPEKVALLGRLDALARAADSRVVQVMASLGAEYDVVLVAGSDGRLA 186
Query: 438 ADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAK 497
AD+RPLV L +++IVE+NGRRE G++ GGR + +YF+D +L V +V SA+ NLEAK
Sbjct: 187 ADVRPLVHLSLSVIVEQNGRRERGSAAGGGRVDLSYFSDDMLRAYVDKAVRSAMTNLEAK 246
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
PAPAG M VVLGPGWPG++LHEA+GHGLEGDFNR+GSS FS IG+R+ASK +T++D+GT
Sbjct: 247 PAPAGQMTVVLGPGWPGVMLHEAVGHGLEGDFNRRGSSLFSGRIGQRVASKGVTVIDDGT 306
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
L NRRGS+N+DDEGNPTQ T LIE+GILKGY+QD NARLM +ITGN RRES+A +P+P
Sbjct: 307 LENRRGSLNMDDEGNPTQRTVLIEDGILKGYLQDTHNARLMGAAITGNGRRESYASLPLP 366
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNT+ML G P EII+SVK GLYA +F GGQVDIT+GKFVFSAS+A++I+NGK+ YP
Sbjct: 367 RMTNTFMLGGDKDPLEIIASVKKGLYAVDFGGGQVDITSGKFVFSASEAWVIENGKLMYP 426
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
VKGATLIG GP+ + ++SMIGNDM+LDPGVG CGK+GQ VPVGVG PT++++++TVGGT
Sbjct: 427 VKGATLIGSGPDAMNQISMIGNDMQLDPGVGTCGKEGQSVPVGVGIPTVRMENLTVGGT 485
>gi|171057627|ref|YP_001789976.1| peptidase U62 modulator of DNA gyrase [Leptothrix cholodnii SP-6]
gi|170775072|gb|ACB33211.1| peptidase U62 modulator of DNA gyrase [Leptothrix cholodnii SP-6]
Length = 487
Score = 620 bits (1599), Expect = e-175, Method: Compositional matrix adjust.
Identities = 294/482 (60%), Positives = 384/482 (79%), Gaps = 1/482 (0%)
Query: 256 QKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVK 315
+ + L AR +LLEPF L + L + L + +KVD AD YFQ+T++E W LEEGIVK
Sbjct: 5 EPTLERLVTARQLLLEPFGLTDASLTQALNTVAAHKVDDADLYFQYTRSEGWSLEEGIVK 64
Query: 316 TGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKK 374
+G+FSI+QGVGVRA+ G+KTAF YSDDIS+ L++A ++ R+IA+ + ++K+ +
Sbjct: 65 SGSFSIDQGVGVRAVVGEKTAFAYSDDISEAALLDAARTVRTIASAGLSRRVKLDVPQQV 124
Query: 375 IKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDG 434
+LY+ D I++++ +K+ LLERVEK+AR KDPRV++V+A L+ EYDV+L+ R DG
Sbjct: 125 AGSRTLYANMDPIATLDSAQKVALLERVEKLARAKDPRVVQVMAGLAAEYDVVLVARADG 184
Query: 435 LIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINL 494
+ AD+RPLV+L VT+I E+NGRRE+G+SG GGR+ + YF D ++ + V +V++AL NL
Sbjct: 185 TLAADVRPLVRLSVTVIAEQNGRREVGSSGGGGRFGFGYFQDDVMSRYVDLAVHAALTNL 244
Query: 495 EAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVD 554
E++PAPAG M VVLG GWPGILLHEA+GHGLEGDFNRKGSS FS IG+R+A+K +T++D
Sbjct: 245 ESRPAPAGEMTVVLGSGWPGILLHEAVGHGLEGDFNRKGSSTFSGRIGQRVAAKGVTVLD 304
Query: 555 NGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHI 614
+GT+A+RRGS+N+DDEG+ TQ LIE+GILKGY+QD +NARLM + TGN RRES+AH+
Sbjct: 305 DGTIADRRGSLNVDDEGHATQRNVLIEDGILKGYIQDSLNARLMKTAPTGNGRRESYAHV 364
Query: 615 PIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKI 674
P+PRMTNTYML G PEEII+S+ GLYA+NF GGQVDIT+GKFVFSAS+AY ++ GKI
Sbjct: 365 PMPRMTNTYMLAGDKTPEEIIASIDRGLYASNFGGGQVDITSGKFVFSASEAYWVEKGKI 424
Query: 675 TYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVG 734
YPVKGATLIG+GP + +VSMIGNDM LDPGVG CGKDGQ VPVGVGQPTL+ID ITVG
Sbjct: 425 LYPVKGATLIGNGPEAMMRVSMIGNDMALDPGVGTCGKDGQSVPVGVGQPTLRIDGITVG 484
Query: 735 GT 736
GT
Sbjct: 485 GT 486
>gi|34497553|ref|NP_901768.1| tldD protein family [Chromobacterium violaceum ATCC 12472]
gi|34103408|gb|AAQ59770.1| probable tldD protein family [Chromobacterium violaceum ATCC 12472]
Length = 480
Score = 619 bits (1595), Expect = e-174, Method: Compositional matrix adjust.
Identities = 287/468 (61%), Positives = 367/468 (78%), Gaps = 2/468 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
IA +LL+P+ LDE L + L +M + VDYAD YFQ+T+NE W LEEGIVK+G+FSI
Sbjct: 5 FTIADELLLKPYGLDEAALERTLSHMRHHAVDYADLYFQYTRNEGWHLEEGIVKSGSFSI 64
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QGVGVRA++GDKTAF YSD I+++ L A ++ R+I N G ++K + SLY
Sbjct: 65 DQGVGVRAVAGDKTAFAYSDAINQDALTRAAEAVRAIGNA--GGDGSAGAVEKRRPQSLY 122
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
D S+ K+ LLE+VEK+A+ DPRVI+V+A L+ EYDV+ + R+DG+ AD+R
Sbjct: 123 PAIDPCHSLEAAAKVALLEKVEKLAKAIDPRVIQVMAGLAMEYDVVYVARHDGVRAADVR 182
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPA 501
PLV++ V++I E+NGRRE G SG GGR++ YF D ++E+ V +V AL+NLE++PAPA
Sbjct: 183 PLVRMSVSVIAEQNGRREQGASGGGGRFDLAYFDDAVVERYVREAVKQALVNLESRPAPA 242
Query: 502 GIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANR 561
G M VVLGPGWPG+LLHEAIGHGLEGDFNRKG+SAFS +G+R+A+ +T+VD+G + R
Sbjct: 243 GQMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGTSAFSGKMGERVAAPGVTVVDDGVMGGR 302
Query: 562 RGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTN 621
RG++ IDDEGN TQ T LIE+GILKGYMQD MN+RLM ++ TGN RRES+A IP+PRMTN
Sbjct: 303 RGALAIDDEGNATQRTVLIEDGILKGYMQDAMNSRLMQVAPTGNGRRESYASIPMPRMTN 362
Query: 622 TYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGA 681
TYML G+ P+EII+SVK+GLYA NF GGQVDIT+GKFVFSAS+A+ I+NGK+TYPVKGA
Sbjct: 363 TYMLAGERDPQEIIASVKDGLYAVNFGGGQVDITSGKFVFSASEAWRIENGKLTYPVKGA 422
Query: 682 TLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKID 729
TLIG GP +L VSMIGND+ LD GVGVCGK+GQ VPVGVGQPTL+ID
Sbjct: 423 TLIGSGPEVLNYVSMIGNDLALDQGVGVCGKEGQSVPVGVGQPTLRID 470
>gi|257095595|ref|YP_003169236.1| peptidase U62 modulator of DNA gyrase [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257048119|gb|ACV37307.1| peptidase U62 modulator of DNA gyrase [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 482
Score = 617 bits (1590), Expect = e-174, Method: Compositional matrix adjust.
Identities = 287/475 (60%), Positives = 371/475 (78%), Gaps = 2/475 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L A+ LL P+ LD L K+ G + ++VDYAD YFQ+T++E W LEEGIVK G+FSI
Sbjct: 9 LAQAQKTLLTPYGLDVADLTKVFGKIMVHQVDYADLYFQYTRSEAWSLEEGIVKAGSFSI 68
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVGVRA+SG+KTAF YSDDIS L +A + R+IA G+ + + +KK ++LY
Sbjct: 69 DEGVGVRALSGEKTAFAYSDDISAQALGDAAGAVRAIA--VAGQQRRVPALKKRSGHALY 126
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
D ++S++ K+ LLER+E +AR +D RV +V+A+L+GEY+V+LI +DG + ADIR
Sbjct: 127 VPHDPLASLDAASKVSLLERLEAMARAEDSRVTQVMAHLAGEYEVVLIAGSDGRLAADIR 186
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPA 501
PLV++ +T+IVE+ G+RE G++G GGR +Y YFTD +L ++V+ A+ NL A+PAPA
Sbjct: 187 PLVRVSLTVIVEEKGQREQGSAGGGGRTDYGYFTDAMLAGYARDAVHQAVTNLVARPAPA 246
Query: 502 GIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANR 561
G M VVLG GWPGILLHEA+GHGLEGDFNRKGSS F+ +G R+A+ +T++D+GT+A R
Sbjct: 247 GTMTVVLGSGWPGILLHEAVGHGLEGDFNRKGSSTFAGRVGSRVAAPGVTVIDDGTIAER 306
Query: 562 RGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTN 621
RGS+NIDDEGNPTQ T LIE+GIL+GY+QD +NARLM ++ TGN RRESFAH+P+PRMTN
Sbjct: 307 RGSLNIDDEGNPTQRTVLIEDGILQGYLQDGLNARLMGVAPTGNGRRESFAHLPLPRMTN 366
Query: 622 TYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGA 681
T MLNG EEII SVK G+YA NF GGQVDITNGKFVFS S+AY+I++GK+ PVKGA
Sbjct: 367 TSMLNGDKSVEEIIKSVKKGIYAVNFGGGQVDITNGKFVFSMSEAYLIEDGKVGAPVKGA 426
Query: 682 TLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
TLIG GP + +VSMIGND +LDPGVG CGKDGQ VPVGVGQPTL+ID +TVGGT
Sbjct: 427 TLIGSGPEAMTQVSMIGNDTRLDPGVGTCGKDGQSVPVGVGQPTLRIDGLTVGGT 481
>gi|296137119|ref|YP_003644361.1| peptidase U62 modulator of DNA gyrase [Thiomonas intermedia K12]
gi|295797241|gb|ADG32031.1| peptidase U62 modulator of DNA gyrase [Thiomonas intermedia K12]
Length = 485
Score = 616 bits (1588), Expect = e-173, Method: Compositional matrix adjust.
Identities = 285/485 (58%), Positives = 387/485 (79%)
Query: 253 LISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEG 312
++++ + L+ AR +LL+P+ +DE L + LG +F++K+DYAD Y Q+T++E W LEEG
Sbjct: 1 MMTEPALLRLDEARRVLLDPYQIDEIALQRALGKVFEHKLDYADVYLQYTRSEGWSLEEG 60
Query: 313 IVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNI 372
+VK+G+F I QG G+RA+ G+KTAF YSDDIS+ L+ A + RSIA NG K+ +
Sbjct: 61 LVKSGSFDIEQGFGIRAVQGEKTAFAYSDDISELALLEAADTVRSIARAGNGSAKVPTDT 120
Query: 373 KKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRN 432
++ LY TD + +++ K+ LL++V+++AR KDPRV++V+A+L GE+DV+L+ R+
Sbjct: 121 RRSAARVLYGATDPLGALDSNAKVALLQKVDRLARAKDPRVVQVMASLGGEHDVMLVLRS 180
Query: 433 DGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALI 492
DGL+ AD+RPLV+L V +IVE+NGRRE G+SG GGRY+ YF D ++ + V +VN+AL+
Sbjct: 181 DGLLAADVRPLVRLSVNVIVEQNGRRESGSSGGGGRYSLGYFDDALIAQYVDEAVNTALV 240
Query: 493 NLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITI 552
NLE++PAPAG M VVLGPGWPG+LLHEA+GHGLEGDFNRKGSSAF+ +G+R+A++ +T+
Sbjct: 241 NLESRPAPAGEMSVVLGPGWPGVLLHEAVGHGLEGDFNRKGSSAFAGRMGQRVAARGVTV 300
Query: 553 VDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFA 612
+D+GTL +RRGS+N+DDEGNPTQ LIE+GIL GYMQD++NARLM + TGN RRES+A
Sbjct: 301 LDDGTLPDRRGSLNVDDEGNPTQRNVLIEDGILVGYMQDMLNARLMGRAPTGNGRRESYA 360
Query: 613 HIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNG 672
H+P+PRMTNTYML G P EI++S+ GLYA NF GGQVDIT+GKFVFSAS+A+ ++ G
Sbjct: 361 HVPMPRMTNTYMLAGDRDPAEILASIDRGLYAVNFGGGQVDITSGKFVFSASEAWWVEKG 420
Query: 673 KITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSIT 732
K YPVKGATLIG+GP+ L +VSMIGND++LD GVG CGK+GQ VPVGVGQPTL+ID +T
Sbjct: 421 KPLYPVKGATLIGNGPDALTRVSMIGNDLRLDSGVGTCGKEGQSVPVGVGQPTLRIDGVT 480
Query: 733 VGGTN 737
VGGT
Sbjct: 481 VGGTG 485
>gi|119897587|ref|YP_932800.1| TldD protein [Azoarcus sp. BH72]
gi|119670000|emb|CAL93913.1| probable TldD protein [Azoarcus sp. BH72]
Length = 481
Score = 616 bits (1588), Expect = e-173, Method: Compositional matrix adjust.
Identities = 293/480 (61%), Positives = 382/480 (79%), Gaps = 2/480 (0%)
Query: 257 KNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKT 316
K+ +PL IA LL P+ L E + K+ + ++++DYAD YFQ+ + E W LEEGIVK+
Sbjct: 3 KSTNPLKIAEKYLLSPYQLGEAEIEKVFRKLMRHRIDYADLYFQYHRAEAWSLEEGIVKS 62
Query: 317 GNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIK 376
G+F I QGVGVRAISG+KTAF YSDDIS + L++A +TR+IA ++ + + KK +
Sbjct: 63 GSFDIEQGVGVRAISGEKTAFAYSDDISLDALVDAATATRAIA-EAGSRRSVGIEPKKSR 121
Query: 377 INSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLI 436
I LY D ++S++ K+KLLER+E AR +DPRV +V+A+++G ++V+++ RNDG +
Sbjct: 122 IR-LYRADDPLASLDDTAKVKLLERLEGFARAEDPRVTQVMAHIAGSWEVVMVARNDGHM 180
Query: 437 VADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEA 496
AD+RPLV++ +T+I+E+NG RE G++G GGRY+Y YF+D L+ +V+ A +NL A
Sbjct: 181 AADVRPLVRVSITVIMEENGHREQGSAGGGGRYDYGYFSDERLQGYARAAVHQARVNLAA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
+PAPAG M VVLG GWPGILLHEAIGHGLEGDFNRKGSSAFS IG+++A++ +T+VD+G
Sbjct: 241 EPAPAGTMTVVLGSGWPGILLHEAIGHGLEGDFNRKGSSAFSGRIGQQVAARGVTVVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL +RRGS+ IDDEGNPT+ T LIE+GIL GYMQD MNARLM M+ TGN RRES+AH+P+
Sbjct: 301 TLPDRRGSLTIDDEGNPTERTVLIEDGILAGYMQDTMNARLMGMAPTGNGRRESYAHLPL 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYMLNG P+EII SVK GLYA NF GGQVDIT+GKFVFS ++AY+I+NGK+T
Sbjct: 361 PRMTNTYMLNGDKDPQEIIKSVKKGLYAVNFGGGQVDITSGKFVFSTAEAYLIENGKVTR 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG+GP++L +VSMIGNDM LDPGVG CGKDGQ VPVGVGQPTL++D +TVGGT
Sbjct: 421 PVKGATLIGNGPDVLTRVSMIGNDMALDPGVGTCGKDGQSVPVGVGQPTLRVDGLTVGGT 480
>gi|334133145|ref|ZP_08506900.1| Putative tldD protein [Methyloversatilis universalis FAM5]
gi|333442055|gb|EGK70027.1| Putative tldD protein [Methyloversatilis universalis FAM5]
Length = 493
Score = 615 bits (1586), Expect = e-173, Method: Compositional matrix adjust.
Identities = 294/495 (59%), Positives = 384/495 (77%), Gaps = 4/495 (0%)
Query: 242 STIINQVKNCILISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQF 301
ST + + ++ ++ + ARS LL PFDL+ L ++ G + +++DYAD YFQ
Sbjct: 2 STPASTLAGATAVTAADL--IGTARSTLLAPFDLERSHLDQVFGMLGAHRIDYADLYFQH 59
Query: 302 TKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ 361
+E W LEEGIVK+G+F+I QGVGVRAI GDKTAF YSD+IS L A ++TR+IA+Q
Sbjct: 60 QCSEAWSLEEGIVKSGSFNIEQGVGVRAIQGDKTAFAYSDEISLPALEAAARATRAIASQ 119
Query: 362 SNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLS 421
G+ +I++ + LY+ + S++ EK+KLLER+E AR +D RV +V+A+++
Sbjct: 120 --GQSQIVRAQPALVPAPLYTARNPQGSLSDTEKVKLLERLESYARAEDGRVSQVMAHIA 177
Query: 422 GEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEK 481
++V+L+ RNDG + AD+RPLV++ VT+I++ RRE G+SG GGR++Y YFTD +L
Sbjct: 178 STHEVVLVMRNDGHMAADVRPLVRVSVTVIMQDGDRREQGSSGGGGRFDYGYFTDAVLRD 237
Query: 482 CVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCI 541
+ +V+ A +NL+A+PAPAG M VVLGPGWPGILLHEAIGHGLEGDFNRKGSSAF+ I
Sbjct: 238 YAARAVHQARVNLDARPAPAGTMSVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFAGRI 297
Query: 542 GKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMS 601
G+++A+K +T+VD+GTL NRRGS+ +DDEGNPT+CTTLIE+G L GYMQD +NARLM ++
Sbjct: 298 GQQVAAKGVTVVDDGTLPNRRGSLTVDDEGNPTRCTTLIEDGKLVGYMQDSLNARLMGVA 357
Query: 602 ITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVF 661
TGN RRESFAH+P+PRMTNTYMLNG PEEII SVK GLYA NF GGQVDIT+GKFVF
Sbjct: 358 PTGNGRRESFAHLPMPRMTNTYMLNGDREPEEIIRSVKKGLYAVNFGGGQVDITSGKFVF 417
Query: 662 SASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGV 721
S ++ Y+I+NGK+TYPVKGATLIG+GP+ L +VSMIGNDM LD GVG CGK+GQ VPVGV
Sbjct: 418 SGAEVYMIENGKVTYPVKGATLIGNGPDALTRVSMIGNDMALDSGVGTCGKEGQSVPVGV 477
Query: 722 GQPTLKIDSITVGGT 736
GQPTL+ID +TVGGT
Sbjct: 478 GQPTLRIDGLTVGGT 492
>gi|332284798|ref|YP_004416709.1| TldD protein [Pusillimonas sp. T7-7]
gi|330428751|gb|AEC20085.1| TldD protein [Pusillimonas sp. T7-7]
Length = 485
Score = 615 bits (1586), Expect = e-173, Method: Compositional matrix adjust.
Identities = 297/482 (61%), Positives = 380/482 (78%), Gaps = 1/482 (0%)
Query: 255 SQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIV 314
+ I+ L A+S+LL+P+ LDE + + LG +F +KVDYAD YFQ+T++E W LEEGIV
Sbjct: 4 ADSAINALATAKSVLLDPWGLDEADMARALGEIFTHKVDYADLYFQYTRSEGWSLEEGIV 63
Query: 315 KTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKK 374
KTG+FSI QGVGVRAISG+KTAF YSD +S L+++ ++ RSIA + G+ K+I
Sbjct: 64 KTGSFSIEQGVGVRAISGEKTAFAYSDTLSAGALLSSAQAVRSIARRGAGRQKVISGHPP 123
Query: 375 IKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDG 434
N LY D +++++ EK+ LLERVE +AR DP +I+V+A L EYDV+L+ +DG
Sbjct: 124 FTHN-LYPAIDPVNTLSAPEKVALLERVEAMARASDPHIIQVMAGLGAEYDVVLVAGSDG 182
Query: 435 LIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINL 494
+ AD+RPLV+L +T+I E+NGRRE+G+ G GGR YFTD +L V + + AL NL
Sbjct: 183 RLAADVRPLVRLSLTVIAERNGRREMGHGGGGGRSGLAYFTDDVLRSYVQRATHEALTNL 242
Query: 495 EAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVD 554
+AKPAPAG M VVLG GWPGILLHEA+GHGLEGDFNRKGSS FS IG+R+ASK +T++D
Sbjct: 243 DAKPAPAGQMTVVLGSGWPGILLHEAVGHGLEGDFNRKGSSVFSGRIGERVASKGVTVID 302
Query: 555 NGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHI 614
+GTLA+RRGS+NIDDEGN TQ LIE+GIL+GYMQD MNARLM M +TGN RRES+AH+
Sbjct: 303 DGTLADRRGSLNIDDEGNATQRNVLIEDGILRGYMQDSMNARLMKMPVTGNGRRESYAHL 362
Query: 615 PIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKI 674
P+PRMTNTYML G+ PEEII+SVK GLYA NF GGQVDIT+GKFVFS S+AY+I+NGK+
Sbjct: 363 PMPRMTNTYMLAGQTPPEEIIASVKKGLYAVNFGGGQVDITSGKFVFSTSEAYLIENGKV 422
Query: 675 TYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVG 734
T PVKGATLIG+GP+ + +VS+IGND++LD GVG CGK+GQ VPVGVG PT+++D +TVG
Sbjct: 423 TCPVKGATLIGNGPDAMNQVSLIGNDLQLDSGVGTCGKEGQSVPVGVGMPTVRMDGLTVG 482
Query: 735 GT 736
GT
Sbjct: 483 GT 484
>gi|410694987|ref|YP_003625609.1| Protein tldD [Thiomonas sp. 3As]
gi|294341412|emb|CAZ89829.1| Protein tldD [Thiomonas sp. 3As]
Length = 487
Score = 615 bits (1585), Expect = e-173, Method: Compositional matrix adjust.
Identities = 286/485 (58%), Positives = 386/485 (79%)
Query: 253 LISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEG 312
++++ + L+ AR +LL+P+ +DE L + LG +F++K+DYAD Y Q+T++E W LEEG
Sbjct: 3 MMTEPALLRLDEARRVLLDPYQIDEIALQRALGKVFEHKLDYADVYLQYTRSEGWSLEEG 62
Query: 313 IVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNI 372
+VK+G+F I QG G+RA+ G+KTAF YSDDIS+ L+ A + RSIA G K+ +
Sbjct: 63 LVKSGSFDIEQGFGIRAVQGEKTAFAYSDDISELALLEAADTVRSIARAGKGSAKVPSDT 122
Query: 373 KKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRN 432
++ LY TD + +++ K+ LL++V+++AR KDPRV++V+A+L GE+DV+L+ R+
Sbjct: 123 RRSAARVLYGATDPLGALDSNAKVALLQKVDRLARAKDPRVVQVMASLGGEHDVMLVLRS 182
Query: 433 DGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALI 492
DGL+ AD+RPLV+L V +IVE+NGRRE G+SG GGRY+ YF D ++ K V +VN+AL+
Sbjct: 183 DGLLAADVRPLVRLSVNVIVEQNGRRESGSSGGGGRYSLGYFDDALITKYVDEAVNTALV 242
Query: 493 NLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITI 552
NLE++PAPAG M VVLGPGWPG+LLHEA+GHGLEGDFNRKGSSAF+ +G+R+A+K +T+
Sbjct: 243 NLESRPAPAGEMSVVLGPGWPGVLLHEAVGHGLEGDFNRKGSSAFAGRMGQRVAAKGVTV 302
Query: 553 VDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFA 612
+D+GTL +RRGS+N+DDEGNPTQ LIE+GIL GYMQD++NARLM + TGN RRES+A
Sbjct: 303 LDDGTLPDRRGSLNVDDEGNPTQRNVLIEDGILVGYMQDMLNARLMGRAPTGNGRRESYA 362
Query: 613 HIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNG 672
H+P+PRMTNTYML G P EI++S+ GLYA NF GGQVDIT+GKFVFSAS+A+ ++ G
Sbjct: 363 HVPMPRMTNTYMLAGDRDPAEILASIDRGLYAVNFGGGQVDITSGKFVFSASEAWWVEKG 422
Query: 673 KITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSIT 732
K YPVKGATLIG+GP+ L +VSMIGND++LD GVG CGK+GQ VPVGVGQPTL+ID +T
Sbjct: 423 KPLYPVKGATLIGNGPDALTRVSMIGNDLRLDSGVGTCGKEGQSVPVGVGQPTLRIDGVT 482
Query: 733 VGGTN 737
VGGT
Sbjct: 483 VGGTG 487
>gi|398809034|ref|ZP_10567889.1| putative Zn-dependent protease-like protein [Variovorax sp. CF313]
gi|398086328|gb|EJL76947.1| putative Zn-dependent protease-like protein [Variovorax sp. CF313]
Length = 486
Score = 613 bits (1581), Expect = e-172, Method: Compositional matrix adjust.
Identities = 298/482 (61%), Positives = 384/482 (79%), Gaps = 2/482 (0%)
Query: 256 QKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVK 315
+ I L A+ +LL PF LDE L K L + ++VD AD YFQ+T++E W LEEGIVK
Sbjct: 5 EPTIERLATAQQLLLTPFGLDESHLSKALAEITAHRVDDADLYFQYTRSEGWSLEEGIVK 64
Query: 316 TGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKK 374
TG+FSI+QGVGVRA+SG+KTAF YSDDIS+ +L++A ++ RSI++ G++K K
Sbjct: 65 TGSFSIDQGVGVRAVSGEKTAFAYSDDISEASLLDAARTVRSISSAGRTGRVKTATR-KI 123
Query: 375 IKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDG 434
SLY D I++++ K+KLLE+VEK+AR +DPRV +V+A L+ EYDV+L+ R DG
Sbjct: 124 ASSRSLYDGIDPIATLDSTAKVKLLEKVEKLARSRDPRVAQVMAGLASEYDVVLVARADG 183
Query: 435 LIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINL 494
+ AD+RPLV+L VT+I E+NGRREIG+ G GGR+ YFTD + + V ++V +AL NL
Sbjct: 184 TLAADVRPLVRLSVTVIAEQNGRREIGSGGGGGRFGLAYFTDEQIAEYVGHAVKAALTNL 243
Query: 495 EAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVD 554
+A+PAPAG M VVLG GWPGILLHEAIGHGLEGDFNRKGSSAFS IG+R+A+K +T++D
Sbjct: 244 DARPAPAGEMTVVLGSGWPGILLHEAIGHGLEGDFNRKGSSAFSGRIGQRVAAKGVTVLD 303
Query: 555 NGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHI 614
+GT+A+RRGS+N+DDEGN +Q LIE+GILKGY+QD +NARLM + TGN RRES+AH+
Sbjct: 304 DGTIADRRGSLNVDDEGNASQRNVLIEDGILKGYIQDALNARLMKVKPTGNGRRESYAHV 363
Query: 615 PIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKI 674
P+PRMTNTYML G P+EI++S+K GLYATNF GGQVDIT+GKFVFSAS+AY ++NGKI
Sbjct: 364 PMPRMTNTYMLGGDKDPKEIVASIKKGLYATNFGGGQVDITSGKFVFSASEAYWVENGKI 423
Query: 675 TYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVG 734
YPVKGAT++G+GP+ L +V+MIGNDM LD GVG CGK+GQ VPVGVGQPTL+ID +TVG
Sbjct: 424 QYPVKGATIVGNGPDALTRVTMIGNDMALDSGVGTCGKEGQSVPVGVGQPTLRIDGLTVG 483
Query: 735 GT 736
GT
Sbjct: 484 GT 485
>gi|388566420|ref|ZP_10152865.1| peptidase u62 modulator of DNA gyrase [Hydrogenophaga sp. PBC]
gi|388266434|gb|EIK91979.1| peptidase u62 modulator of DNA gyrase [Hydrogenophaga sp. PBC]
Length = 486
Score = 613 bits (1581), Expect = e-172, Method: Compositional matrix adjust.
Identities = 290/485 (59%), Positives = 379/485 (78%)
Query: 252 ILISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEE 311
++ + + L A +LLEPF L L + L + + VD AD YFQ T+NE W LEE
Sbjct: 1 MIAREPTLARLATAEQLLLEPFGLTTAHLHQALAEIRSHGVDDADLYFQATRNEGWSLEE 60
Query: 312 GIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKN 371
GIVKTG+F I QGVGVRA+SG+KTAF YSDD+S +L++A ++ RSI+ Q K +K
Sbjct: 61 GIVKTGSFHIEQGVGVRAVSGEKTAFAYSDDLSWESLLDAARTVRSISGQGQAKKVKVKA 120
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ K SLY+ D I+S++ K+ LLE+VE++A+ KDPRV +V+A L+ E+DV+L+ R
Sbjct: 121 SRVAKSRSLYADVDPIASMDSTTKVALLEKVERLAKAKDPRVAQVMAGLAAEHDVVLVAR 180
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
DG + AD+RPL++L VT+I E+NGRRE+GNSG GGR+ YF D +++ V +V AL
Sbjct: 181 ADGTLAADVRPLIRLSVTVIAEQNGRREMGNSGGGGRFGLAYFDDAMVQSYVDEAVEQAL 240
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
NLE++PAPAG M VVLG GWPGILLHEA+GHGLEGDFNRKGSSAF+ IG+R+A+K +T
Sbjct: 241 TNLESRPAPAGEMVVVLGSGWPGILLHEAVGHGLEGDFNRKGSSAFAGRIGQRVAAKGVT 300
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
++D+GT+A+RRGS+NIDDEG+ +Q LIE+GIL+GY+QD MNARLM + TGN RRES+
Sbjct: 301 VLDDGTIADRRGSLNIDDEGHVSQRNVLIEDGILRGYIQDAMNARLMGVKPTGNGRRESY 360
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
AH P+PRMTNTYML G P+EI++S+K GLYATNF GGQVDIT+GKFVFSAS+A+ ++N
Sbjct: 361 AHTPMPRMTNTYMLGGDKDPDEIVASIKKGLYATNFGGGQVDITSGKFVFSASQAFWVEN 420
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSI 731
GKI YPVKGATL+G+GP+ L +VSMIGNDM+LD GVG CGK+GQ VPVGVGQPTL+I+++
Sbjct: 421 GKIQYPVKGATLVGNGPDALTRVSMIGNDMRLDTGVGTCGKEGQSVPVGVGQPTLRIEAL 480
Query: 732 TVGGT 736
TVGGT
Sbjct: 481 TVGGT 485
>gi|71908940|ref|YP_286527.1| microcin-processing peptidase 2 [Dechloromonas aromatica RCB]
gi|71848561|gb|AAZ48057.1| microcin-processing peptidase 2, Unknown type peptidase, MEROPS
family U62 [Dechloromonas aromatica RCB]
Length = 481
Score = 613 bits (1580), Expect = e-172, Method: Compositional matrix adjust.
Identities = 292/476 (61%), Positives = 376/476 (78%), Gaps = 3/476 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L A S+LL PF L E L + G + ++VDYAD YFQ++++E W L+EGIVK+G+F+I
Sbjct: 7 LAQAESLLLAPFSLTEGDLTRTFGQILTHQVDYADLYFQYSRSEAWSLDEGIVKSGSFNI 66
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKI-KINSL 380
+QGVGVRA+SG+KTAF YSDDIS L +A K+ A + G+ I+ + SL
Sbjct: 67 DQGVGVRALSGEKTAFAYSDDISAMALGDAAKAV--RAIAAAGQSGILPALSATTAARSL 124
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y D I+S+ K+KLLER+E AR DPRV++V+A+L+GEY+VIL+ +DG + ADI
Sbjct: 125 YVPHDPIASLPADAKVKLLERLEGFARSLDPRVMQVMASLAGEYEVILVAGSDGRLAADI 184
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAP 500
RPLV+ +++IVE+NG+RE G++G GGR+++ YF D IL++ +V+ A+INL A PAP
Sbjct: 185 RPLVRCSISVIVEENGKREQGSAGGGGRFDFGYFDDEILQRYAKEAVHQAIINLHADPAP 244
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG M VVLG GWPGILLHEA+GHGLEGDFNRKGSSAFS +G+R+A+K +T++D+GT+A+
Sbjct: 245 AGQMTVVLGSGWPGILLHEAVGHGLEGDFNRKGSSAFSGRLGQRVAAKGVTVIDDGTIAD 304
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+NIDDEGN TQ T LIE+GILKGYMQD +NARLM +S TGN RRESFAH+P+PRMT
Sbjct: 305 RRGSLNIDDEGNTTQRTVLIEDGILKGYMQDSLNARLMGVSPTGNGRRESFAHLPLPRMT 364
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NT ML G+ P EII SVK G+YA NF GGQVDIT+GKFVFS S+AY+I++G++T P+KG
Sbjct: 365 NTMMLAGEHDPAEIIKSVKKGIYAANFGGGQVDITSGKFVFSMSEAYLIEDGQVTRPIKG 424
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
ATLIG+GP+ L +VSMIGND+KLDPGVG CGKDGQ VPVGVGQPTL+ID +TVGGT
Sbjct: 425 ATLIGNGPDALTRVSMIGNDLKLDPGVGTCGKDGQSVPVGVGQPTLRIDGLTVGGT 480
>gi|319791688|ref|YP_004153328.1| peptidase u62 modulator of DNA gyrase [Variovorax paradoxus EPS]
gi|315594151|gb|ADU35217.1| peptidase U62 modulator of DNA gyrase [Variovorax paradoxus EPS]
Length = 489
Score = 612 bits (1579), Expect = e-172, Method: Compositional matrix adjust.
Identities = 301/489 (61%), Positives = 390/489 (79%), Gaps = 5/489 (1%)
Query: 251 CILISQK-NIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWIL 309
++IS++ I L A+ +LL PF LDE L K L + +KVD AD YFQ+T++E W L
Sbjct: 2 AVMISREPTIERLATAQQLLLTPFGLDESHLSKALAEITSHKVDDADLYFQYTRSEGWSL 61
Query: 310 EEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKII 369
EEGIVKTG+FSI+QGVGVRA+SG+KTAF YSDDIS+ +L++A ++ RSI+ S G+ +
Sbjct: 62 EEGIVKTGSFSIDQGVGVRAVSGEKTAFAYSDDISEASLLDAARTVRSIS--SAGRTGRV 119
Query: 370 KN-IKKIKIN-SLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVI 427
K +KI + SLY+ D IS+++ K+KLLE+ EK+AR +DPRV +V+A L+ EYDV+
Sbjct: 120 KTPTRKIASSRSLYNGVDPISTLDSTAKVKLLEKTEKLARSRDPRVAQVMAGLASEYDVV 179
Query: 428 LITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSV 487
L+ R DG + AD+RPLV+L VT+I E+NGRRE+G+ G GGR+ YF D + + V +V
Sbjct: 180 LVARADGTLAADVRPLVRLSVTVIAEQNGRREVGSGGGGGRFGLAYFDDEKIAEYVDQAV 239
Query: 488 NSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIAS 547
+AL NL+A+PAPAG M VVLG GWPGILLHEAIGHGLEGDFNRKGSSAFS IG+R+A+
Sbjct: 240 KAALTNLDARPAPAGEMTVVLGSGWPGILLHEAIGHGLEGDFNRKGSSAFSGRIGQRVAA 299
Query: 548 KEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNAR 607
K +T++D+GT+A+RRGS+N+DDEGN +Q LIE+GILKGY+QD MNARLM + TGN R
Sbjct: 300 KGVTVLDDGTIADRRGSLNVDDEGNASQRNVLIEDGILKGYIQDSMNARLMKVKPTGNGR 359
Query: 608 RESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAY 667
RES+AH+P+PRMTNTYML G P+EI++S+K GLYATNF GGQVDIT+GKFVFSAS+A+
Sbjct: 360 RESYAHVPMPRMTNTYMLGGDKDPQEIVASIKKGLYATNFGGGQVDITSGKFVFSASEAF 419
Query: 668 IIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLK 727
++NGKI YPVKGAT++G+GP+ L +V+MIGNDM LD GVG CGK+GQ VPVGVGQPTL+
Sbjct: 420 WVENGKIQYPVKGATIVGNGPDALTRVTMIGNDMALDSGVGTCGKEGQSVPVGVGQPTLR 479
Query: 728 IDSITVGGT 736
ID +TVGGT
Sbjct: 480 IDGLTVGGT 488
>gi|239813949|ref|YP_002942859.1| peptidase U62 modulator of DNA gyrase [Variovorax paradoxus S110]
gi|239800526|gb|ACS17593.1| peptidase U62 modulator of DNA gyrase [Variovorax paradoxus S110]
Length = 486
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 297/482 (61%), Positives = 384/482 (79%), Gaps = 2/482 (0%)
Query: 256 QKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVK 315
+ I L A+ +LL PF LDE L K L + ++VD AD YFQ+T++E W LEEGIVK
Sbjct: 5 EPTIERLATAQKLLLTPFGLDESHLSKALAEITAHRVDDADLYFQYTRSEGWSLEEGIVK 64
Query: 316 TGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKK 374
TG+FSI+QGVGVRA+SG+KTAF YSDDIS+ +L++A ++ RSI++ G++K K
Sbjct: 65 TGSFSIDQGVGVRAVSGEKTAFAYSDDISEASLLDAARTVRSISSAGRTGRVKTATR-KI 123
Query: 375 IKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDG 434
SLY+ D IS+++ K+KLLE+VEK+AR +DPRV +V+A L+ EYDV+L+ R DG
Sbjct: 124 ASSRSLYNGVDPISTLDSTAKVKLLEKVEKLARSRDPRVAQVMAGLASEYDVVLVARADG 183
Query: 435 LIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINL 494
+ AD+RPLV+L VT+I E+NGRRE+G+ G GGR+ YF D + + V +V +AL NL
Sbjct: 184 TLAADVRPLVRLSVTVIAEQNGRREVGSGGGGGRFGLAYFNDTQIAEYVDQAVKAALTNL 243
Query: 495 EAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVD 554
+A+PAPAG M VVLG GWPGILLHEAIGHGLEGDFNRKGSSAFS IG+R+A+K +T++D
Sbjct: 244 DARPAPAGEMTVVLGSGWPGILLHEAIGHGLEGDFNRKGSSAFSGRIGQRVAAKGVTVLD 303
Query: 555 NGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHI 614
+GT+A+RRGS+N+DDEGN +Q LIE+GILKGY+QD +NARLM + TGN RRES+AH+
Sbjct: 304 DGTIADRRGSLNVDDEGNASQRNVLIEDGILKGYIQDSLNARLMKVKPTGNGRRESYAHV 363
Query: 615 PIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKI 674
P+PRMTNTYML G P+EI++S+K GLYATNF GGQVDIT+GKFVFSAS+A+ ++NGKI
Sbjct: 364 PMPRMTNTYMLGGDKDPKEIVASIKKGLYATNFGGGQVDITSGKFVFSASEAFWVENGKI 423
Query: 675 TYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVG 734
YPVKGAT++G+GP+ L +V+MIGNDMKLD GVG CGK+GQ VPVGVGQPTL+ID +TVG
Sbjct: 424 QYPVKGATIVGNGPDALTRVTMIGNDMKLDSGVGTCGKEGQSVPVGVGQPTLRIDGLTVG 483
Query: 735 GT 736
GT
Sbjct: 484 GT 485
>gi|217969641|ref|YP_002354875.1| peptidase U62 modulator of DNA gyrase [Thauera sp. MZ1T]
gi|217506968|gb|ACK53979.1| peptidase U62 modulator of DNA gyrase [Thauera sp. MZ1T]
Length = 481
Score = 610 bits (1573), Expect = e-172, Method: Compositional matrix adjust.
Identities = 287/480 (59%), Positives = 372/480 (77%), Gaps = 2/480 (0%)
Query: 257 KNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKT 316
K+ +PL +A LL P+ L E L K + ++ +D+AD YFQ+ ++E W LEEGIVK+
Sbjct: 3 KSQNPLKVADRYLLSPYGLGEAELEKTFRKLMRHDIDFADLYFQYQRSEAWSLEEGIVKS 62
Query: 317 GNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIK 376
G+F I QGVGVRAISG+KTAF YSDDIS + L+ A +T A + G+ + + +
Sbjct: 63 GSFDIEQGVGVRAISGEKTAFAYSDDISLDALVGAATAT--RAIAAAGERRRVGIVPHKL 120
Query: 377 INSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLI 436
LY D + S++ K++LLER+E AR +D RV +V+A+++G ++V+++ R+DG
Sbjct: 121 RTRLYRADDPLDSLDDTAKVELLERLEAFARAEDARVTQVMAHIAGSWEVVMVVRSDGHQ 180
Query: 437 VADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEA 496
AD+RPLV++ +T+I+E++GRRE G++G GGRY+Y +F D L +V+ A +NL A
Sbjct: 181 AADVRPLVRVSITVIMEEDGRREQGSAGGGGRYDYGWFCDDRLHDYARQAVHQARVNLGA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
PAPAG M VVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFS IG+++A++ +T+VD+G
Sbjct: 241 DPAPAGTMPVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSGRIGQQVAARGVTVVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL +RRGS++IDDEGNPT+ T LIE+GIL GYMQD+MNARLM M +TGN RRESFAH+P+
Sbjct: 301 TLPDRRGSLSIDDEGNPTERTVLIEDGILTGYMQDMMNARLMGMPVTGNGRRESFAHLPL 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYMLNG PEEII SVK GLYA NF GGQVDIT+GKFVFS ++AY+I+NGK+T
Sbjct: 361 PRMTNTYMLNGDKDPEEIIKSVKKGLYAVNFGGGQVDITSGKFVFSTAEAYLIENGKVTR 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG+GP+ L K+ MIGNDM+LDPGVG CGKDGQ VPVGVGQPTL+ID +TVGGT
Sbjct: 421 PVKGATLIGNGPDALTKIRMIGNDMRLDPGVGTCGKDGQSVPVGVGQPTLRIDGLTVGGT 480
>gi|375103455|ref|ZP_09749716.1| putative Zn-dependent protease-like protein [Burkholderiales
bacterium JOSHI_001]
gi|374664186|gb|EHR68971.1| putative Zn-dependent protease-like protein [Burkholderiales
bacterium JOSHI_001]
Length = 487
Score = 607 bits (1566), Expect = e-171, Method: Compositional matrix adjust.
Identities = 295/482 (61%), Positives = 380/482 (78%), Gaps = 1/482 (0%)
Query: 256 QKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVK 315
+ + L A+ +LLEP L E L + LG M ++++D AD YFQ T++E W LEEGIVK
Sbjct: 5 EPTLERLATAQRLLLEPSGLTEAALARALGTMGEHRIDDADLYFQITRHEGWSLEEGIVK 64
Query: 316 TGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGK-IKIIKNIKK 374
+G+FSI+QGVGVRA++G+KTAF YSDDIS+ L +A ++ RSIA + +KI K
Sbjct: 65 SGSFSIDQGVGVRAVAGEKTAFAYSDDISEAALQDAARTVRSIAAAGQSRRVKISTPAKV 124
Query: 375 IKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDG 434
+LY+ TD I +++ +K+ LLERVEK+AR +DPRV++V+A L+ EYDV+++ R DG
Sbjct: 125 SGSRALYAPTDPIGTLDSVQKVALLERVEKMARSRDPRVVQVMAGLAAEYDVVMVARADG 184
Query: 435 LIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINL 494
AD+RPLV++ +T+I E+NGRRE+G+ G GGR+ +F D +L V +VN+AL NL
Sbjct: 185 TRAADVRPLVRVSITVIAEQNGRREVGSGGGGGRFGLGFFQDDVLSTYVDQAVNAALTNL 244
Query: 495 EAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVD 554
E++PAPAG+M VVLGPGWPG+LLHEA+GHGLEGDFNRKGSS F+ IG+R+A+K +T++D
Sbjct: 245 ESRPAPAGVMTVVLGPGWPGVLLHEAVGHGLEGDFNRKGSSTFAGRIGQRVAAKGVTVLD 304
Query: 555 NGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHI 614
+GTL +RRGS+NIDDEG+ +Q LIE+GILKGY+QD MNARLM TGN RRES+AH+
Sbjct: 305 DGTLPDRRGSLNIDDEGHASQRNVLIEDGILKGYIQDSMNARLMKAKPTGNGRRESYAHV 364
Query: 615 PIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKI 674
P+PRMTNTYML GK +EII+S+K GLYATNF GGQVDITNGKFVFSAS+A+ ++NGKI
Sbjct: 365 PMPRMTNTYMLGGKRSSDEIIASIKRGLYATNFGGGQVDITNGKFVFSASEAFWVENGKI 424
Query: 675 TYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVG 734
YPVKGAT+IG GP LKKVSMIGNDM LD GVGVCGK+GQ VPVGVGQPTL+ID +TVG
Sbjct: 425 LYPVKGATIIGSGPEALKKVSMIGNDMALDSGVGVCGKEGQSVPVGVGQPTLRIDGLTVG 484
Query: 735 GT 736
GT
Sbjct: 485 GT 486
>gi|91786991|ref|YP_547943.1| microcin-processing peptidase 2 [Polaromonas sp. JS666]
gi|91696216|gb|ABE43045.1| microcin-processing peptidase 2, Unknown type peptidase, MEROPS
family U62 [Polaromonas sp. JS666]
Length = 493
Score = 607 bits (1566), Expect = e-171, Method: Compositional matrix adjust.
Identities = 292/476 (61%), Positives = 385/476 (80%), Gaps = 2/476 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L IA+ +LLEPF L + L + LG + + VD AD YFQ+T++E W LEEGIVKTG+FSI
Sbjct: 18 LLIAQKLLLEPFGLTDAALNRALGEITSHGVDDADLYFQYTRSEGWSLEEGIVKTGSFSI 77
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSN-GKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KTAF YSDDIS+ +L++A ++ RSI+ S G++K + K SL
Sbjct: 78 DQGVGVRAVSGEKTAFAYSDDISEASLLDAARTVRSISAASKAGRVKTPQR-KIASSRSL 136
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y D I++++ K+KLLE+VEK+A+ KDPR+++V+A L+ EYDV+++ R DG + AD+
Sbjct: 137 YQDLDPIATLDSTAKVKLLEKVEKLAKAKDPRIVQVMAGLASEYDVVMVARADGTLAADV 196
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAP 500
RPLV+L VT+I E+ GRRE+G+ G GGR+ YF D + + V ++V +AL NL+A+PAP
Sbjct: 197 RPLVRLSVTVIAEQKGRREMGSGGGGGRFGLAYFDDAQIAQYVDDAVKAALTNLDARPAP 256
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG M VVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFS IG+R+A+K +T++D+GT+A+
Sbjct: 257 AGEMTVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSGRIGQRVAAKGVTVLDDGTIAD 316
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+N+DDEG+ +Q LIE+GILKGY+QD +NARLM + TGN RRES+AH+P+PRMT
Sbjct: 317 RRGSLNVDDEGHASQRNVLIEDGILKGYIQDSLNARLMKVKPTGNGRRESYAHVPMPRMT 376
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYML G PEEI++S+K GLYATNF GGQVDIT+GKFVFSAS+A+ ++NGKI YPVKG
Sbjct: 377 NTYMLGGDKAPEEIVASIKKGLYATNFGGGQVDITSGKFVFSASEAFWVENGKILYPVKG 436
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
AT++G+GP+ L +V+M+GNDM+LD GVG CGK+GQ VPVGVGQPTL+ID +TVGGT
Sbjct: 437 ATIVGNGPDALTRVTMMGNDMQLDSGVGTCGKEGQSVPVGVGQPTLRIDGLTVGGT 492
>gi|124268953|ref|YP_001022957.1| TldD protein [Methylibium petroleiphilum PM1]
gi|124261728|gb|ABM96722.1| TldD protein [Methylibium petroleiphilum PM1]
Length = 487
Score = 607 bits (1565), Expect = e-171, Method: Compositional matrix adjust.
Identities = 290/482 (60%), Positives = 383/482 (79%), Gaps = 1/482 (0%)
Query: 256 QKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVK 315
+ + L +AR +LLEPF LDE L L + ++++D AD YFQ+T++E W LEEGIVK
Sbjct: 5 EPTLERLAVARQVLLEPFGLDEAKLANALRVIGEHRIDDADLYFQYTRSEGWSLEEGIVK 64
Query: 316 TGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKI 375
+G+F I+QGVGVRA++G+KTAF YSDDIS+ L++A ++ R+IA + + KI
Sbjct: 65 SGSFGIDQGVGVRAVAGEKTAFAYSDDISEAALLDAARTVRTIAASGMSRSVKVGGAPKI 124
Query: 376 KINS-LYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDG 434
+ LY+ D I++++ +K+ LLER EK+AR +DPRV++V+A L+GEYDV+L+ R DG
Sbjct: 125 AGSRVLYAPMDPIATLDSTQKVALLERAEKLARARDPRVVQVMAGLAGEYDVVLVARADG 184
Query: 435 LIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINL 494
+ AD+RPLV+L +T+I E+NGRRE+G+ G GGR+ YF D ++ V +VN+AL NL
Sbjct: 185 TVAADVRPLVRLSLTVIAEQNGRREMGSGGGGGRFGLGYFRDDVIAGYVDQAVNAALTNL 244
Query: 495 EAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVD 554
E++PAPAG M VVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFS IGKR+A+K +T++D
Sbjct: 245 ESRPAPAGEMTVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSGKIGKRVAAKGVTVLD 304
Query: 555 NGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHI 614
+GTL +RRGS+N+DDEGNP+Q LIE+GILKGY+QD MNARLM + TGN RRES+AH+
Sbjct: 305 DGTLPDRRGSLNVDDEGNPSQRNVLIEDGILKGYIQDSMNARLMKVKPTGNGRRESYAHV 364
Query: 615 PIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKI 674
P+PRMTNTYML G +EI++S+K GLYATNF GGQVDIT+GKFVFSAS+A+ ++NG++
Sbjct: 365 PMPRMTNTYMLGGDKSRDEIVASMKKGLYATNFGGGQVDITSGKFVFSASEAFWVENGRV 424
Query: 675 TYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVG 734
YPVKGAT+IG+GP+ L +V MIGND++LD GVG CGK+GQ VPVGVGQPTL+ID +TVG
Sbjct: 425 QYPVKGATIIGNGPDALTRVKMIGNDLQLDTGVGTCGKEGQSVPVGVGQPTLRIDGLTVG 484
Query: 735 GT 736
GT
Sbjct: 485 GT 486
>gi|226941060|ref|YP_002796134.1| peptidase U62, modulator of DNA gyrase [Laribacter hongkongensis
HLHK9]
gi|226715987|gb|ACO75125.1| peptidase U62, modulator of DNA gyrase [Laribacter hongkongensis
HLHK9]
Length = 481
Score = 607 bits (1564), Expect = e-170, Method: Compositional matrix adjust.
Identities = 284/476 (59%), Positives = 369/476 (77%), Gaps = 3/476 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L+IA +LL L L ++ + ++ VDYAD YFQ+T+ E W L+EGIVK+G+F+I
Sbjct: 7 LDIATGLLLTRNGLTPAALDQVFARLGQHDVDYADLYFQYTRQEGWSLDEGIVKSGSFNI 66
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVGVRA++G+KTAF YSD+IS + L++A TR+I G ++ + ++L+
Sbjct: 67 DEGVGVRAVAGEKTAFAYSDEISLDALLSAADITRAIGR--TGGDGRVQAHSRTTGHALF 124
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ D I+S++ K+ LL R+E++AR DPRV +V+A L+ EYDV+ + R DG AD+R
Sbjct: 125 APIDPIASLDSASKVALLNRLEQMARSMDPRVKQVMAGLAAEYDVMYVARRDGTHAADVR 184
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPA 501
PLV+L VT+I E GRRE G++G GGR++ +FTD +L +V+ AL+NLEA+PAPA
Sbjct: 185 PLVRLSVTVIAEHQGRREQGSAGGGGRFDLAFFTDEVLHDYARKAVDQALVNLEARPAPA 244
Query: 502 GIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANR 561
G M VVLG GWPG+LLHEAIGHGLEGDFNRKG+SAF+ +G+R+A+ +T+VD+GTLANR
Sbjct: 245 GQMTVVLGSGWPGVLLHEAIGHGLEGDFNRKGTSAFAGRLGERVAAPGVTVVDDGTLANR 304
Query: 562 RGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTN 621
RGS+NIDDEG PT CTTLIE+GILKGYMQD +NARL + TGNARRES+AHIP+PRMTN
Sbjct: 305 RGSLNIDDEGTPTSCTTLIEDGILKGYMQDSLNARLTGTAPTGNARRESYAHIPMPRMTN 364
Query: 622 TYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGA 681
TYML G EEII+SV+ GLYA NF GGQVDIT+GKFVFSAS+A++I+NGK++YPVKGA
Sbjct: 365 TYMLAGDKAAEEIIASVERGLYAVNFGGGQVDITSGKFVFSASEAWMIENGKLSYPVKGA 424
Query: 682 TLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKID-SITVGGT 736
TLIG GP +L VSMIGND+ LD GVGVCGK+GQ VPVGVGQPTL+ID +TVGGT
Sbjct: 425 TLIGSGPEVLNHVSMIGNDLALDTGVGVCGKEGQSVPVGVGQPTLRIDGGLTVGGT 480
>gi|451823076|ref|YP_007459350.1| TldD protein [Candidatus Kinetoplastibacterium desouzaii TCC079E]
gi|451775876|gb|AGF46917.1| TldD protein [Candidatus Kinetoplastibacterium desouzaii TCC079E]
Length = 486
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 292/475 (61%), Positives = 386/475 (81%), Gaps = 1/475 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+IA++ILL+PF +DE + K +G +F NK+DYAD YFQ+ E+W LEEGIVKTGNFSI
Sbjct: 11 FHIAKNILLDPFGIDENTINKAIGIIFSNKIDYADLYFQYALRESWSLEEGIVKTGNFSI 70
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
N GVG+R+ISG+KTAF YSD IS ++++ + + RSI N ++ K + + + N+LY
Sbjct: 71 NHGVGIRSISGEKTAFSYSDSISLDSILKSSQIVRSIGNSNSSSYKKVY-VPSVINNNLY 129
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ ++ I+S++ +K+ LLE++EK+A+ +P V +V+A+L+ EY+VI++ +DG IVADIR
Sbjct: 130 NNSNFINSLSANDKVNLLEKIEKMAKGCNPLVSQVMASLAAEYEVIIVAASDGKIVADIR 189
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPA 501
PLV++ +T+I EKNGRREIG+SG GGR ++++F+D IL V ++V ++ NLEA PAPA
Sbjct: 190 PLVRISITVISEKNGRREIGHSGGGGRTDFSFFSDEILSSYVDHAVKESINNLEAIPAPA 249
Query: 502 GIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANR 561
G M VVLG GWPGILLHEA+GHGLEGDFNRKGSS FS IG+R+A+K +T++DNG++ +
Sbjct: 250 GEMIVVLGNGWPGILLHEAVGHGLEGDFNRKGSSVFSGKIGERVANKGVTVIDNGSIPYK 309
Query: 562 RGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTN 621
RGS+NIDDEGN T+ LIE+GIL GYMQDIMNA+LMN +ITGN RRESFAHIP+PRMTN
Sbjct: 310 RGSLNIDDEGNETKSNILIEDGILCGYMQDIMNAKLMNSNITGNGRRESFAHIPLPRMTN 369
Query: 622 TYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGA 681
TYM++G PEEI+SSV NG+YA NF+GGQVDIT+GKFVFS S+AY+I+ GKIT P+KGA
Sbjct: 370 TYMVSGSSTPEEIVSSVSNGIYAVNFAGGQVDITSGKFVFSTSEAYLIEKGKITTPIKGA 429
Query: 682 TLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
TLIG+GP ++K+VSMIGND KLD GVG+CGKDGQ VPVGVG PT+KID +TVGGT
Sbjct: 430 TLIGNGPEVMKQVSMIGNDSKLDSGVGMCGKDGQSVPVGVGMPTIKIDKLTVGGT 484
>gi|429462757|ref|YP_007184220.1| TldD protein [Candidatus Kinetoplastibacterium crithidii (ex
Angomonas deanei ATCC 30255)]
gi|451811494|ref|YP_007447949.1| peptidase U62 modulator of DNA gyrase [Candidatus
Kinetoplastibacterium crithidii TCC036E]
gi|429338271|gb|AFZ82694.1| TldD protein [Candidatus Kinetoplastibacterium crithidii (ex
Angomonas deanei ATCC 30255)]
gi|451776652|gb|AGF47651.1| peptidase U62 modulator of DNA gyrase [Candidatus
Kinetoplastibacterium crithidii TCC036E]
Length = 487
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 289/481 (60%), Positives = 373/481 (77%), Gaps = 11/481 (2%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L+IA+ LL+PF L+E L K +G + NKVDYAD YFQ+ E+W LEEGIVK GNF+I
Sbjct: 11 LHIAQKTLLDPFGLNELSLDKAMGTILSNKVDYADLYFQYVIKESWSLEEGIVKNGNFAI 70
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKI---- 377
NQGVGVRAISG+KTAF YSD IS ++LI + K +IA + K+ +KI +
Sbjct: 71 NQGVGVRAISGEKTAFAYSDSISLDSLIKSSKIVSNIARSGS------KHHEKITLPFNY 124
Query: 378 -NSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLI 436
+LY + + ++ K++LLE++EK+A+ ++ +V+ANLS Y+VIL++ +DG +
Sbjct: 125 QYNLYQPINPLDTLTADSKVRLLEKIEKMAKKSSHKITQVMANLSAMYEVILVSASDGKL 184
Query: 437 VADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEA 496
VAD+RPLV+L +T+I E NGRRE G++G G R ++++F+D IL V ++ +L NLEA
Sbjct: 185 VADVRPLVRLSLTVIAEDNGRRETGHAGGGSRSDFSFFSDEILSSYVDQAIKESLTNLEA 244
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
K APAG MKVVLG GWPGILLHEA+GHGLEGDFNRKGSS FS IG+++ASK +T++DNG
Sbjct: 245 KEAPAGEMKVVLGNGWPGILLHEAVGHGLEGDFNRKGSSVFSGKIGEKVASKGVTVIDNG 304
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ RRGS+N+DDEGN T+ LI++G+L YMQDIMNA+LM M TGN RRESFAHIP+
Sbjct: 305 TIEGRRGSLNVDDEGNSTKSNVLIDDGVLCNYMQDIMNAKLMKMQPTGNGRRESFAHIPL 364
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML+G FHPEEIISSV G+YA NFSGGQVDIT+GKFVFSAS+AY+I++GKIT
Sbjct: 365 PRMTNTYMLSGSFHPEEIISSVNYGVYAANFSGGQVDITSGKFVFSASEAYMIEDGKITK 424
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG GP ++ ++SMIGND+KLD GVG CGKDGQ VPVGVG PT+ ID +TVGGT
Sbjct: 425 PIKGATLIGSGPEVMNQISMIGNDLKLDSGVGTCGKDGQSVPVGVGMPTILIDRLTVGGT 484
Query: 737 N 737
+
Sbjct: 485 S 485
>gi|398803241|ref|ZP_10562347.1| putative Zn-dependent protease-like protein [Polaromonas sp. CF318]
gi|398097120|gb|EJL87432.1| putative Zn-dependent protease-like protein [Polaromonas sp. CF318]
Length = 507
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 289/477 (60%), Positives = 381/477 (79%), Gaps = 4/477 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L IA+ +LL PF L + L + LG + + D AD YFQ+T++E W LEEGIVKTG+FSI
Sbjct: 32 LEIAQKLLLTPFGLTQAHLGRALGEITSHGADDADLYFQYTRSEGWSLEEGIVKTGSFSI 91
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNI--KKIKINS 379
+QGVGVRA+SG+KTAF YSDDIS+ +L++A ++ RSIA + GK +K + S
Sbjct: 92 DQGVGVRAVSGEKTAFAYSDDISEASLLDAARTVRSIA--AGGKSARVKTPAGRIAGSRS 149
Query: 380 LYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVAD 439
LY D I++++ K++LLE+VEK+A+ KDPR+++V+A L+ EYDV+++ R DG + AD
Sbjct: 150 LYQGLDPIATLDSTAKVQLLEKVEKLAKAKDPRIVQVMAGLASEYDVVMVARADGTLAAD 209
Query: 440 IRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPA 499
+RPLV+L VT+I E+ GRRE+G+ G GGR+ YF D + + V+++V +AL NL+A+PA
Sbjct: 210 VRPLVRLSVTVIAEQKGRREVGSGGGGGRFGLAYFDDAQIAEYVNDAVKAALTNLDARPA 269
Query: 500 PAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLA 559
PAG M VVLG GWPGILLHEAIGHGLEGDFNRKGSSAFS IG+R+A+K +T++D+GT+A
Sbjct: 270 PAGEMTVVLGSGWPGILLHEAIGHGLEGDFNRKGSSAFSGRIGQRVAAKGVTVLDDGTIA 329
Query: 560 NRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRM 619
+RRGS+N+DDEGN +Q LIE+GILKGY+QD +NARLM + TGN RRES+AH+P+PRM
Sbjct: 330 DRRGSLNVDDEGNASQRNVLIEDGILKGYIQDSLNARLMKVKPTGNGRRESYAHVPMPRM 389
Query: 620 TNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVK 679
TNTYML G PEEI++S+K GLYATNF GGQVDIT+GKFVFSAS+A+ ++NGKI YPVK
Sbjct: 390 TNTYMLGGDKQPEEIVASIKKGLYATNFGGGQVDITSGKFVFSASEAFWVENGKILYPVK 449
Query: 680 GATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
GAT++G+GP+ L +V+M+GNDM LD GVG CGK+GQ VPVGVGQPTL+ID +TVGGT
Sbjct: 450 GATIVGNGPDALTRVTMMGNDMALDSGVGTCGKEGQSVPVGVGQPTLRIDGLTVGGT 506
>gi|118594722|ref|ZP_01552069.1| Peptidase U62, modulator of DNA gyrase [Methylophilales bacterium
HTCC2181]
gi|118440500|gb|EAV47127.1| Peptidase U62, modulator of DNA gyrase [Methylophilales bacterium
HTCC2181]
Length = 477
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 287/478 (60%), Positives = 376/478 (78%), Gaps = 2/478 (0%)
Query: 259 IHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGN 318
++ ++ ++ P L E L I+G++ + +DYAD YFQ++KNE W LE+G VK G+
Sbjct: 1 MNSFALSNKYIMSPAGLAESDLDLIMGSISSHNIDYADLYFQYSKNEFWALEDGAVKNGS 60
Query: 319 FSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKIN 378
FSI+QGVG+R+I+G KTAF YSD+IS L + VK +SI + K I +K+ +
Sbjct: 61 FSIDQGVGMRSIAGQKTAFTYSDEISMEALKDGVKIVKSINKDNESKSYPIG--EKLIKH 118
Query: 379 SLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVA 438
SLY + I SI +KI+LLER+E +++ +P +IKV A+L+ +++V+LI G +V
Sbjct: 119 SLYQPLNPIESIGSTKKIQLLERIEALSKKLNPSIIKVSASLASQFEVVLIKTFQGELVE 178
Query: 439 DIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKP 498
D+RPLV+L V++I+EKNGRRE G++G GGRY+ YFTD IL + S +VN A+INL+A P
Sbjct: 179 DVRPLVRLSVSVIIEKNGRREQGSAGGGGRYSLEYFTDAILHEYASEAVNQAVINLDAIP 238
Query: 499 APAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL 558
APAG M VVLG GWPGILLHEAIGHGLEGDFNRKG+SAFS +G ++AS +IT+VD+GT+
Sbjct: 239 APAGSMTVVLGSGWPGILLHEAIGHGLEGDFNRKGTSAFSGKMGSKVASTQITVVDDGTI 298
Query: 559 ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPR 618
NRRGS+NIDDEGNPT TTLIENGIL GYMQD MNA LMN +TGN RRES+AH+P+PR
Sbjct: 299 PNRRGSLNIDDEGNPTSKTTLIENGILVGYMQDEMNAHLMNQKVTGNGRRESYAHLPMPR 358
Query: 619 MTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPV 678
MTNT+MLNGK+ P+EII SV +G+YA NF GGQVDIT+GKFVFSAS+A++IKNGK+++P+
Sbjct: 359 MTNTFMLNGKYEPDEIIKSVDDGIYANNFGGGQVDITSGKFVFSASQAWVIKNGKLSHPI 418
Query: 679 KGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
KGA+++G+GP+IL +VSM+GNDMKLD GVG CGK+GQ VPVGVGQPTLKID+I VGGT
Sbjct: 419 KGASIVGNGPDILNEVSMVGNDMKLDTGVGTCGKEGQSVPVGVGQPTLKIDNIIVGGT 476
>gi|372490007|ref|YP_005029572.1| putative Zn-dependent protease-like protein [Dechlorosoma suillum
PS]
gi|359356560|gb|AEV27731.1| putative Zn-dependent protease-like protein [Dechlorosoma suillum
PS]
Length = 479
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 294/473 (62%), Positives = 375/473 (79%), Gaps = 3/473 (0%)
Query: 265 ARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQG 324
A S+LL P+ LD+K L ++ G + KN VDYAD YFQ+++ E W LEEGIVK+G+F+I+QG
Sbjct: 8 AESLLLTPYGLDDKRLSEVFGQIMKNDVDYADLYFQYSRAEAWSLEEGIVKSGSFNIDQG 67
Query: 325 VGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFT 384
VGVRAISG+KTAF YSDDIS+N L +A + A + G+ +K K + LY
Sbjct: 68 VGVRAISGEKTAFAYSDDISRNALGDAAAAV--RAIGAAGQSGTAPKLKGRKGHGLYPAQ 125
Query: 385 DTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLV 444
D I S+ +K+KLLER+E AR D RV +V+A+L+ EYDV+L+ +DG + AD+RPLV
Sbjct: 126 DPIPSLQAADKVKLLERLEGYARAIDSRVTQVMASLASEYDVVLVAGSDGRLAADVRPLV 185
Query: 445 QLFVTIIVEKN-GRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGI 503
++ VT+IV+ G+RE G++G GGRY+Y YF++ +L++ + +V+ A+ NL+A+PAPAG
Sbjct: 186 RVSVTVIVDGGKGKREQGSAGGGGRYDYGYFSEEVLKRYAAEAVHQAVTNLDARPAPAGT 245
Query: 504 MKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRG 563
M VVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFS IG+R+A+K +T+VD+GTL +RRG
Sbjct: 246 MTVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSGRIGERVAAKGVTVVDDGTLPDRRG 305
Query: 564 SINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTY 623
S+NIDDEGNPT+ T LIE+GILKGYMQD +NARLM + TGN RRESFAH+P+PRMTNT
Sbjct: 306 SLNIDDEGNPTRRTVLIEDGILKGYMQDSLNARLMGVEPTGNGRRESFAHLPLPRMTNTI 365
Query: 624 MLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATL 683
ML G PEEI+ SVK G+YA NF GGQVDIT+GKFVFS S+AY+++NGK+ YPVKGATL
Sbjct: 366 MLAGDKSPEEILKSVKKGIYAVNFGGGQVDITSGKFVFSMSEAYMVENGKVLYPVKGATL 425
Query: 684 IGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
IG+GP+ L +V MIGND+ LDPGVG CGKDGQ VPVGVGQPTL+ID +TVGGT
Sbjct: 426 IGNGPDALTRVKMIGNDLGLDPGVGTCGKDGQSVPVGVGQPTLRIDGLTVGGT 478
>gi|438000014|ref|YP_007183747.1| TldD protein [Candidatus Kinetoplastibacterium blastocrithidii (ex
Strigomonas culicis)]
gi|451812943|ref|YP_007449396.1| TldD protein [Candidatus Kinetoplastibacterium blastocrithidii
TCC012E]
gi|429339248|gb|AFZ83670.1| TldD protein [Candidatus Kinetoplastibacterium blastocrithidii (ex
Strigomonas culicis)]
gi|451778912|gb|AGF49792.1| TldD protein [Candidatus Kinetoplastibacterium blastocrithidii
TCC012E]
Length = 486
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 288/476 (60%), Positives = 371/476 (77%), Gaps = 1/476 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LNIA+S LLEP+++ E I+ + +M VDYAD YFQ + E+W LEEGIVK GNFSI
Sbjct: 10 LNIAKSKLLEPWNITENIISNAINSMMTKNVDYADMYFQHSSQESWSLEEGIVKNGNFSI 69
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSL 380
+ GVG+RA+SG++TAF YSD +S + +IN+ K+ R+I N +NG +K K ++N+L
Sbjct: 70 SNGVGIRALSGERTAFAYSDSLSYDDIINSAKTVRTITNSGTNGSRIYVKPSKIQEVNNL 129
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
YS + S+ +KI LLE++E+IAR P V +V+A+LS E D+++I +DG ++D+
Sbjct: 130 YSNYSPMDSMETGQKIFLLEKIERIARKLSPNVSQVMASLSSERDIVVIAGSDGRFISDV 189
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAP 500
RPLV++ +T+I E GRREIG SG G R + YF+D IL V +VN ALINLEA AP
Sbjct: 190 RPLVRVSITVIAESKGRREIGRSGGGARTDLLYFSDEILTSYVKQAVNEALINLEATSAP 249
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG M VVLG GWPGILLHEA+GHGLEGDFNRKGSS FS +G ++ASK++T++D+GT+ N
Sbjct: 250 AGEMTVVLGNGWPGILLHEAVGHGLEGDFNRKGSSIFSGRLGDKVASKDVTVIDDGTIPN 309
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+NIDDEGN T+ LIENG+LKGYM DIMN+ LM + TGN RRESFAHIP+PRMT
Sbjct: 310 RRGSLNIDDEGNITKKNILIENGVLKGYMHDIMNSNLMGVLPTGNGRRESFAHIPLPRMT 369
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYML G P+EIISSVK GLYA NF+GGQVDIT+GKFVFSAS+AYII+NGKI PVKG
Sbjct: 370 NTYMLGGMSDPKEIISSVKKGLYAVNFAGGQVDITSGKFVFSASEAYIIENGKIINPVKG 429
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
AT+IG+GP++++++SMIGND+ LD GVGVCGKDGQ +PVGVG PT++I+ +TVGGT
Sbjct: 430 ATIIGNGPDVMQQISMIGNDLALDSGVGVCGKDGQSIPVGVGMPTVRIEKLTVGGT 485
>gi|344200648|ref|YP_004784974.1| peptidase U62 modulator of DNA gyrase [Acidithiobacillus
ferrivorans SS3]
gi|343776092|gb|AEM48648.1| peptidase U62 modulator of DNA gyrase [Acidithiobacillus
ferrivorans SS3]
Length = 481
Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust.
Identities = 282/478 (58%), Positives = 367/478 (76%), Gaps = 5/478 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L IAR+ L P + E L K+ G + +D AD YFQ++++E + LEEG+VK+G+ SI
Sbjct: 6 LEIARATLFAPSGISEGELEKVFGRLSHRALDDADLYFQYSRSEGFSLEEGVVKSGSHSI 65
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QGVGVRA+SG++ YSD+I+ + L+ A ++ R+I + G+ K + ++ + +LY
Sbjct: 66 EQGVGVRAVSGERQGLAYSDEIAVDALLTAAEAARAIVHHP-GQTKGLVWQRRQGL-ALY 123
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
D ++SI EKI LLERVE+ AR DPR+++V+A+LS ++V+L+ R +G + AD+R
Sbjct: 124 PPVDPLASIPNSEKIALLERVERAARACDPRIVQVMASLSARFEVVLVARLNGTMAADVR 183
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF--TDMILEKCVSNSVNSALINLEAKPA 499
PLV+L V++IVE+ GRRE G++G GGRY+Y F DM E+ + ALINLEA+ A
Sbjct: 184 PLVRLNVSVIVEQGGRREQGSAGGGGRYDYQTFLQGDMA-EEFAREAARQALINLEAEAA 242
Query: 500 PAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLA 559
PAG M+VVLGPGWPGILLHEAIGHGLEGDFNRKG+SAFS +G+R+A+ +T+VD+GTL
Sbjct: 243 PAGCMEVVLGPGWPGILLHEAIGHGLEGDFNRKGTSAFSGLVGQRVAAPGVTVVDDGTLD 302
Query: 560 NRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRM 619
RRGS+N+DDEG TQCTTLIE+GILKGY+QD +NARL TGN RRES+AH+P+PRM
Sbjct: 303 GRRGSLNVDDEGTQTQCTTLIEDGILKGYLQDTLNARLTGTHSTGNGRRESYAHLPMPRM 362
Query: 620 TNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVK 679
TNTYM G P+EII+SVK+GLYA NF GGQVDITNGKFVFSAS+AY+I+NGKIT PVK
Sbjct: 363 TNTYMRAGNRDPQEIIASVKHGLYAVNFGGGQVDITNGKFVFSASEAYLIENGKITRPVK 422
Query: 680 GATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
GATLIG+GP++L +V MIGND++LD GVG CGKDGQ VPVGVGQPTLKI +TVGGT
Sbjct: 423 GATLIGNGPDVLTRVEMIGNDLQLDTGVGTCGKDGQSVPVGVGQPTLKIRDLTVGGTQ 480
>gi|384086264|ref|ZP_09997439.1| peptidase U62 modulator of DNA gyrase [Acidithiobacillus
thiooxidans ATCC 19377]
Length = 481
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 278/477 (58%), Positives = 358/477 (75%), Gaps = 3/477 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L+IAR+ L P + E L K+ G + +D AD YFQ++++E + LEEG+VK G+ SI
Sbjct: 6 LDIARATLFTPGGISEGELEKVFGRLSHRALDDADLYFQYSRSEGFSLEEGVVKNGSHSI 65
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QGVGVRAI G++ YSD+I L+ A + R+I +Q ++ ++ SLY
Sbjct: 66 EQGVGVRAIQGERQGLAYSDEIGVEALLTAADAARAIVHQPGENRGLV--WQRRNGLSLY 123
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
TD ++SI EKI LLERVE++AR DPR+++V+A+LS +++ +L+ R DG + AD+R
Sbjct: 124 QPTDPLASIPNEEKIALLERVEQVARSVDPRIVQVMASLSAKFEAVLVARLDGTMAADVR 183
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAP 500
PLV+L V+ I E+ GRRE G++G GGRY+Y F + + + ALINLEA+ AP
Sbjct: 184 PLVRLHVSAIAEQGGRREQGSAGGGGRYDYQTFLKGQMADDFAREAARQALINLEAEAAP 243
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG M VVLGPGWPGILLHEAIGHGLEGDFNRKG+SAFS +G+R+A+ +T+VD+GTL N
Sbjct: 244 AGSMDVVLGPGWPGILLHEAIGHGLEGDFNRKGTSAFSGRVGERVAAPGVTVVDDGTLEN 303
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+N+DDEG TQCTTLIE+GILKGY+QD +NARL TGN RRES+AH+P+PRMT
Sbjct: 304 RRGSLNVDDEGTETQCTTLIEDGILKGYLQDTLNARLTGTRSTGNGRRESYAHLPMPRMT 363
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYM G P+EII+SV+ GLYA NF GGQVDITNGKFVFSAS+AY+I+NGKIT P+KG
Sbjct: 364 NTYMRAGDRDPQEIIASVRRGLYAVNFGGGQVDITNGKFVFSASEAYLIENGKITRPIKG 423
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
ATLIG+GP++L +V MIGND++LD GVG CGKDGQ VPVGVGQPTLKI +TVGGT
Sbjct: 424 ATLIGNGPDVLTRVEMIGNDLQLDTGVGTCGKDGQSVPVGVGQPTLKIRDLTVGGTQ 480
>gi|224825316|ref|ZP_03698421.1| peptidase U62 modulator of DNA gyrase [Pseudogulbenkiania
ferrooxidans 2002]
gi|224602237|gb|EEG08415.1| peptidase U62 modulator of DNA gyrase [Pseudogulbenkiania
ferrooxidans 2002]
Length = 480
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 285/467 (61%), Positives = 371/467 (79%), Gaps = 2/467 (0%)
Query: 263 NIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSIN 322
+IAR +LL P LDE+ L + L M +++VDYAD YFQ+T++E W LEEGIVK+G+F+I+
Sbjct: 6 SIARELLLAPSGLDERDLERTLARMTEHQVDYADLYFQYTRHEGWSLEEGIVKSGSFNID 65
Query: 323 QGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYS 382
QGVGVRA++G+KTAF YSD+I+ L A + R I + + + +LY
Sbjct: 66 QGVGVRAVAGEKTAFAYSDEINTEALTRAADAVREIGRSGGSGSVGSVSPRSSR--ALYP 123
Query: 383 FTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRP 442
D +S+ K+ LLE+VEK+AR DP +I+V+A L+ EYDVI + R+DG+ AD+RP
Sbjct: 124 ALDPCASLEAAAKVALLEKVEKLARAMDPSIIQVMAGLASEYDVIYLARHDGVRAADVRP 183
Query: 443 LVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAG 502
LV++ V +I E++GRRE G+SG GGR + ++FTD ++E+ V +V A +NL+A+PAPAG
Sbjct: 184 LVRMSVYVIAEQDGRRESGSSGGGGRVDLSHFTDEVVERYVRQAVEQAKVNLQARPAPAG 243
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
M VVLGPGWPG+LLHEAIGHGLEGDFNRKG+SAFS IG+R+AS +T+VD+GTLA+RR
Sbjct: 244 QMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGTSAFSGRIGQRVASPGVTVVDDGTLASRR 303
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+ IDDEGN T+CT LIE+GILKGYMQD MNARLM ++ TGN RRES+AHIP+PRMTNT
Sbjct: 304 GSLAIDDEGNQTECTMLIEDGILKGYMQDEMNARLMGVAPTGNGRRESYAHIPMPRMTNT 363
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML G+ P+EII+SVK+GLYA NF GGQVDIT+GKFVFSAS+A+ I++GK++YPVKGAT
Sbjct: 364 YMLAGQHDPQEIIASVKDGLYAVNFGGGQVDITSGKFVFSASEAWRIEDGKLSYPVKGAT 423
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKID 729
LIG+GP++L VSMIGND++LD GVGVCGK+GQ VPVGVGQPTL+ID
Sbjct: 424 LIGNGPDVLHYVSMIGNDLQLDAGVGVCGKEGQSVPVGVGQPTLRID 470
>gi|56475949|ref|YP_157538.1| Zn-dependent peptidase, potential modulator of DNA gyrase
[Aromatoleum aromaticum EbN1]
gi|56311992|emb|CAI06637.1| Zn-dependent peptidase, potential modulator of DNA gyrase
[Aromatoleum aromaticum EbN1]
Length = 481
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 290/476 (60%), Positives = 367/476 (77%), Gaps = 2/476 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L +A LL P+DL L K+ + +++DYAD YFQ+ ++E W LEEGIVK+G+F+I
Sbjct: 8 LKVADRYLLNPYDLGHPELEKVFSKLLSHQLDYADLYFQYHRSEGWSLEEGIVKSGSFNI 67
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QGVGVRAI G+KTAF YSDDIS L A ++TR+IA+ ++ + LY
Sbjct: 68 EQGVGVRAICGEKTAFAYSDDISLPALTAAAEATRAIADAGGQHSVAVR--PHAGLPRLY 125
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
D ++S++ K+KLLER+E+ AR +DPRV +V+A++SG ++V+++ R+DG + AD+R
Sbjct: 126 RGDDPLASLDDTAKVKLLERLERFARDEDPRVTQVMAHISGSWEVVMVMRSDGHMAADVR 185
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPA 501
PLV++ VT+I+E NG RE G+ G GGR++Y YF D L + +V+ A NL A PAPA
Sbjct: 186 PLVRVSVTVIMEDNGDREQGSGGGGGRFDYGYFDDDRLREYALAAVHQARTNLGAGPAPA 245
Query: 502 GIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANR 561
G M VVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFS +G+++A+K +T+VD+GTL +R
Sbjct: 246 GTMSVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSGRMGQQVAAKGVTVVDDGTLPDR 305
Query: 562 RGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTN 621
RGS+ IDDEGNPT+CT LIE+GIL GYMQD MNARLM + TGN RRESFAH+P+PRMTN
Sbjct: 306 RGSLTIDDEGNPTECTVLIEDGILTGYMQDTMNARLMGVKPTGNGRRESFAHLPLPRMTN 365
Query: 622 TYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGA 681
TYMLNG EEII SVK GLYA NF GGQVDIT+GKFVFS ++AY+I+NGK+T PVKGA
Sbjct: 366 TYMLNGDKSHEEIIKSVKKGLYAANFGGGQVDITSGKFVFSTAEAYLIENGKVTRPVKGA 425
Query: 682 TLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
TLIG+GP+ L +VSMIGNDM LDPGVG CGKDGQ VPVGVGQPTL+ID +TVGGT
Sbjct: 426 TLIGNGPDALTRVSMIGNDMALDPGVGTCGKDGQSVPVGVGQPTLRIDGLTVGGTG 481
>gi|406915400|gb|EKD54487.1| hypothetical protein ACD_60C00079G0040 [uncultured bacterium]
Length = 483
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 281/476 (59%), Positives = 365/476 (76%), Gaps = 3/476 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L+IAR LL+P L + L +L N+ + +D AD YFQ T +E+W+LE+GI+K G + I
Sbjct: 5 LDIARKDLLDPAGLTDHQLQTLLSNVLGSSIDNADLYFQSTYSESWVLEDGIIKEGGYDI 64
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVGVRA+SG+KT F YSDDI L A ++ +SI+ +G + IK + + LY
Sbjct: 65 DRGVGVRAMSGEKTGFAYSDDIVMPALEQAARAAKSISQ--HGGQQAIKTWQWTTGHELY 122
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + S+ EK+ LL+R++ AR +DPRVI+V +L+ EY+ +LI +DG + AD+R
Sbjct: 123 LPLNPLHSLTETEKVALLQRIDAYAREQDPRVIQVNVSLAAEYETVLIMASDGHLAADVR 182
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILE-KCVSNSVNSALINLEAKPAP 500
PLV+L V+++VE GRRE G +G GGRY+Y+YFT+ L +V AL+NL+A AP
Sbjct: 183 PLVRLNVSVVVEHQGRREQGYAGGGGRYDYSYFTENDLGLSYAREAVRQALVNLDAVEAP 242
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG M VVLGPGWPG+LLHEA+GHGLEGDFNRKG+S FS IG+R+AS T+VD+GTL N
Sbjct: 243 AGTMPVVLGPGWPGVLLHEAVGHGLEGDFNRKGTSVFSGKIGQRVASALCTVVDDGTLPN 302
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+N+DDEG PTQCT LIE GIL+ Y+QD NARLM M TGN RRES+AH+P+PRMT
Sbjct: 303 RRGSLNVDDEGVPTQCTVLIEKGILRNYIQDKRNARLMGMQSTGNGRRESYAHMPMPRMT 362
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYML G+ PEEII+SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NGKIT P+KG
Sbjct: 363 NTYMLPGESTPEEIIASVKRGVYAVNFGGGQVDITSGKFVFSASEAYLIENGKITVPLKG 422
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
ATLIG+GP++L KVSM+GND+KLD G+G+CGKDGQ VPVGVGQPTL+ID++TVGGT
Sbjct: 423 ATLIGNGPDVLTKVSMVGNDLKLDTGIGICGKDGQSVPVGVGQPTLRIDALTVGGT 478
>gi|451936460|ref|YP_007460314.1| TldD protein [Candidatus Kinetoplastibacterium oncopeltii TCC290E]
gi|451777383|gb|AGF48358.1| TldD protein [Candidatus Kinetoplastibacterium oncopeltii TCC290E]
Length = 486
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 289/476 (60%), Positives = 368/476 (77%), Gaps = 1/476 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LNIA+S LLEP+++ E +++ + ++ VDYAD YFQ + E+W LEEGIVK GNFSI
Sbjct: 10 LNIAKSKLLEPWNITENLIINAINDIITKNVDYADMYFQHSSQESWGLEEGIVKNGNFSI 69
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKI-IKNIKKIKINSL 380
+ GVG+RA+SG+KTAF YSD +S +IN+ K+ RSI N KI I ++ + NSL
Sbjct: 70 SNGVGIRALSGEKTAFAYSDSLSYEDIINSAKTVRSINNSGTNSSKIYIPPSREYRSNSL 129
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y + S+ +KI LLE++E +AR + +V+A+LS E D+++I +DG ++D+
Sbjct: 130 YGNCSPMDSMETSQKIFLLEKIEMMARRLSTNISQVMASLSSERDIVIIAGSDGRFISDV 189
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAP 500
RPLV++ +T+I E NGRREIG SG G R + YF+D IL V +VN ALINLEA AP
Sbjct: 190 RPLVRVSITVIAESNGRREIGRSGGGARADLLYFSDEILMGYVKQAVNEALINLEAISAP 249
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG M VVLG GWPGILLHEA+GHGLEGDFNRKGSS FS IG+++ASK +T++D+GT+ N
Sbjct: 250 AGEMTVVLGNGWPGILLHEAVGHGLEGDFNRKGSSVFSGRIGEKVASKGVTVIDDGTIPN 309
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+N+DDEGN T+ LIE+G+LKGYMQDIMN+ LM + TGN RRESFAHIP+PRMT
Sbjct: 310 RRGSLNVDDEGNITKKNVLIEDGVLKGYMQDIMNSNLMGVLPTGNGRRESFAHIPLPRMT 369
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYML G +P+EIISSVK GLYA NFSGGQVDIT+GKFVFSAS+AYII+NGKIT PVKG
Sbjct: 370 NTYMLGGTNNPKEIISSVKKGLYAVNFSGGQVDITSGKFVFSASEAYIIENGKITNPVKG 429
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
ATLIG+G ++++++SMIGND LD GVGVCGKDGQ VPVGVG PT++ID +TVGGT
Sbjct: 430 ATLIGNGLDVMQQISMIGNDSVLDSGVGVCGKDGQNVPVGVGMPTIRIDKLTVGGT 485
>gi|74316530|ref|YP_314270.1| modulator of DNA gyrase [Thiobacillus denitrificans ATCC 25259]
gi|74056025|gb|AAZ96465.1| putative modulator of DNA gyrase [Thiobacillus denitrificans ATCC
25259]
Length = 490
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 291/472 (61%), Positives = 369/472 (78%), Gaps = 2/472 (0%)
Query: 265 ARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQG 324
A + LL P LD L + G + + VDYAD YFQ++++E W LEEG VK+G+F+I+QG
Sbjct: 20 AEATLLTPNGLDADKLAPVFGRLLTHDVDYADLYFQYSRSEGWSLEEGQVKSGSFNIDQG 79
Query: 325 VGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFT 384
VGVRAI G+KTAF YSDDIS + + + A G+ + + + + LY+
Sbjct: 80 VGVRAICGEKTAFAYSDDISLDA--LGAAADATRAIARAGQNRSFGMVHRGEGRLLYNAV 137
Query: 385 DTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLV 444
D + S++ K+ LLER+EK AR DPRVI+V+A+L+ EY+V+ I R+DG + AD+RPLV
Sbjct: 138 DPLVSLDDAAKVALLERLEKKARAMDPRVIQVMASLASEYEVVFIARSDGHLAADVRPLV 197
Query: 445 QLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIM 504
+L + +I E++GRRE G+ G GGR++Y+YFTD ILEK +V+ A +NLEA+PAPAG M
Sbjct: 198 RLSLQVIAEQDGRREQGSGGGGGRFDYSYFTDDILEKYARQAVHQASVNLEARPAPAGSM 257
Query: 505 KVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGS 564
VVLG GWPGILLHEAIGHGLEGDFNRKGSSAFS IG+R+A+ +T+VD+GT+ RRGS
Sbjct: 258 TVVLGAGWPGILLHEAIGHGLEGDFNRKGSSAFSGRIGERVAAPGVTVVDDGTIPLRRGS 317
Query: 565 INIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYM 624
+N+DDEGNPTQ TTLIE+G+L GYMQD+MNARLM M TGNARRESFAH+ +PRMTNT M
Sbjct: 318 LNVDDEGNPTQRTTLIEDGVLTGYMQDMMNARLMGMQPTGNARRESFAHLTMPRMTNTLM 377
Query: 625 LNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLI 684
L G HP EII+SVKNGLYA NF GGQVDIT+GKFVFSA++AY+I+NGKI+YPVKGATLI
Sbjct: 378 LGGDKHPHEIIASVKNGLYAVNFGGGQVDITSGKFVFSAAEAYMIENGKISYPVKGATLI 437
Query: 685 GHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
G+GP +L +VSMIGNDM++D GVG CGK+GQ VPVGVGQPTL+ID +TVGGT
Sbjct: 438 GNGPEVLTRVSMIGNDMEMDSGVGTCGKEGQSVPVGVGQPTLRIDGLTVGGT 489
>gi|451812217|ref|YP_007448671.1| TldD protein [Candidatus Kinetoplastibacterium galatii TCC219]
gi|451778119|gb|AGF49067.1| TldD protein [Candidatus Kinetoplastibacterium galatii TCC219]
Length = 486
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 293/476 (61%), Positives = 367/476 (77%), Gaps = 1/476 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LNIA+S LLEP+++ E I+ + N+ VDYAD YFQ T E+W LEEGIVK GNFSI
Sbjct: 10 LNIAKSKLLEPWNITENIITNAINNIITKNVDYADMYFQHTSQESWSLEEGIVKNGNFSI 69
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSL 380
N GVG+RA+SG+KTAF YSD +S +IN+ K+ ++I N +NG I N L
Sbjct: 70 NNGVGIRALSGEKTAFAYSDSLSYEDIINSAKTVQAITNSGTNGSRIYIPPSNGYNPNKL 129
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
YS + I S+ +KI LLE++EK+AR V +V+A+LS E D+++I +DG ++DI
Sbjct: 130 YSNHNPIDSMKTSQKISLLEKIEKMARKMSSNVSQVMASLSSEIDIVVIAGSDGRFISDI 189
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAP 500
RPLV++ +T+I E NGRRE+G SG G R + YF+D IL V +V+ ALINLEA PAP
Sbjct: 190 RPLVRVSITVIAESNGRREVGRSGGGARTDLLYFSDEILMDYVKQAVHEALINLEAIPAP 249
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS FS +G+++ASK +T+VD+GT+ N
Sbjct: 250 AGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKGSSIFSGRVGEKVASKGVTVVDDGTIPN 309
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+NIDDEGN T+ LIE+GILKGYM DIMN+ LM + TGN RRESFAHIP+PRMT
Sbjct: 310 RRGSLNIDDEGNITKKNILIEDGILKGYMHDIMNSNLMGVLPTGNGRRESFAHIPLPRMT 369
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYML G P+EIISSVK GLYA NFSGGQVDIT+GKFVFSAS+AYII+NGKIT PVKG
Sbjct: 370 NTYMLGGMNDPKEIISSVKKGLYAVNFSGGQVDITSGKFVFSASEAYIIENGKITNPVKG 429
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
AT+IG GP++++++SMIGND+ LD GVGVCGKDGQ +PVGVG PT++ID +TVGGT
Sbjct: 430 ATIIGSGPDVMQQISMIGNDLSLDSGVGVCGKDGQNIPVGVGMPTVRIDRLTVGGT 485
>gi|383755929|ref|YP_005434914.1| protein TldD [Rubrivivax gelatinosus IL144]
gi|381376598|dbj|BAL93415.1| protein TldD [Rubrivivax gelatinosus IL144]
Length = 487
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 280/486 (57%), Positives = 379/486 (77%), Gaps = 1/486 (0%)
Query: 252 ILISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEE 311
++ + + L IA+S LLEP + E L + L + +++VD AD YFQ T++E W LEE
Sbjct: 1 MITREPTLERLAIAQSSLLEPAGIGEAQLARALATIAEHRVDDADLYFQSTRHEGWSLEE 60
Query: 312 GIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIK 370
GIVK G+FSI+QGVGVRA++G+KTAF YSDD+S+ L++A ++ R+IA N ++K+ +
Sbjct: 61 GIVKGGSFSIDQGVGVRAVAGEKTAFAYSDDLSEAALLDAARTVRTIAAAGQNKRVKLAR 120
Query: 371 NIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILIT 430
+ +LY+ D I++++ +K+ LLERVEK+AR KDPR+++V+A L+ EYDV+ +
Sbjct: 121 APRIAASRALYAPMDPIATLDSTQKVALLERVEKLARAKDPRIVQVMAGLAAEYDVVFVA 180
Query: 431 RNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSA 490
R DG AD+RPLV+L VT+I E++GRRE+G G GGR+ YF D ++E V +V++A
Sbjct: 181 RADGTRAADVRPLVRLSVTVIAEQDGRREVGTGGGGGRFGLGYFQDAVIEGYVRQAVDAA 240
Query: 491 LINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEI 550
L NLE++P PAG M VVLGPGWPG+LLHEA+GHGLEGDFNRKGSSAFS +G+R+A+ +
Sbjct: 241 LTNLESRPVPAGEMTVVLGPGWPGVLLHEAVGHGLEGDFNRKGSSAFSGRLGQRVAAPGV 300
Query: 551 TIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRES 610
T++D+GTL +RRGS+N+DDEG ++ LIE+GIL GY+QD +NARLM + TGN RRES
Sbjct: 301 TVLDDGTLPDRRGSLNVDDEGVASKRNVLIEDGILVGYIQDSLNARLMGVKPTGNGRRES 360
Query: 611 FAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIK 670
+AH+P+PRMTNTYML G EEI++S+K GLYATNF GGQVDIT+GKFVFSAS+A+ ++
Sbjct: 361 YAHLPMPRMTNTYMLAGDKPREEIVASMKRGLYATNFGGGQVDITSGKFVFSASEAFWVE 420
Query: 671 NGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS 730
GKI YPVKGAT+IG GP+ LK+VSMIGND++LD GVG CGK+GQ VPVGVGQPTL+I+
Sbjct: 421 KGKIQYPVKGATIIGSGPDALKRVSMIGNDLELDTGVGTCGKEGQSVPVGVGQPTLRIER 480
Query: 731 ITVGGT 736
+TVGGT
Sbjct: 481 LTVGGT 486
>gi|332525170|ref|ZP_08401345.1| TldD protein [Rubrivivax benzoatilyticus JA2]
gi|332108454|gb|EGJ09678.1| TldD protein [Rubrivivax benzoatilyticus JA2]
Length = 487
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 279/486 (57%), Positives = 379/486 (77%), Gaps = 1/486 (0%)
Query: 252 ILISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEE 311
++ + + L IA+S LLEP + E L + L + +++VD AD YFQ T++E W LEE
Sbjct: 1 MITREPTLERLAIAQSSLLEPAGIGEAQLARALATIAEHRVDDADLYFQSTRHEGWSLEE 60
Query: 312 GIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIK 370
GIVK G+FSI+QGVGVRA+SG+KTAF YSDD+S+ L++A ++ R+IA N ++K+ +
Sbjct: 61 GIVKGGSFSIDQGVGVRAVSGEKTAFAYSDDLSEAALLDAARTVRTIAAAGQNKRVKLAR 120
Query: 371 NIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILIT 430
+ +LY+ D I++++ +K+ LLERVEK+AR KDPR+++V+A L+ EYDV+ +
Sbjct: 121 APRIAASRALYAPMDPIATLDSTQKVALLERVEKLARAKDPRIVQVMAGLAAEYDVVFVA 180
Query: 431 RNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSA 490
R DG AD+RPLV+L +T+I E++GRRE+G G GGR+ YF D ++E V +V++A
Sbjct: 181 RADGTRAADVRPLVRLSLTVIAEQDGRREVGTGGGGGRFGLGYFQDAVIEGYVRQAVDAA 240
Query: 491 LINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEI 550
L NLE++PAPAG M VVLGPGWPG+LLHEA+GHGLEGDFNRKGSSAFS +G+R+A+ +
Sbjct: 241 LTNLESRPAPAGEMSVVLGPGWPGVLLHEAVGHGLEGDFNRKGSSAFSGRLGQRVAAPGV 300
Query: 551 TIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRES 610
T++D+GTL +RRGS+N+DDEG ++ LIE+GIL Y+QD +NARLM + TGN RRES
Sbjct: 301 TVLDDGTLPDRRGSLNVDDEGVASKRNVLIEDGILVSYIQDSLNARLMGVKPTGNGRRES 360
Query: 611 FAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIK 670
+AH+P+PRMTNTYML G EEI++S+K GLYATNF GGQVDIT+GKFVFSAS+A+ ++
Sbjct: 361 YAHLPMPRMTNTYMLAGDKTREEIVASMKRGLYATNFGGGQVDITSGKFVFSASEAFWVE 420
Query: 671 NGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS 730
G+I YPVKGAT+IG GP+ LK+VSMIGND++LD GVG CGK+GQ VPVGVGQPTL+I+
Sbjct: 421 KGRIQYPVKGATIIGSGPDALKRVSMIGNDLELDTGVGTCGKEGQSVPVGVGQPTLRIER 480
Query: 731 ITVGGT 736
+TVGGT
Sbjct: 481 LTVGGT 486
>gi|347539551|ref|YP_004846976.1| C69 family peptidase [Pseudogulbenkiania sp. NH8B]
gi|345642729|dbj|BAK76562.1| peptidase U62, modulator of DNA gyrase [Pseudogulbenkiania sp.
NH8B]
Length = 480
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 284/467 (60%), Positives = 370/467 (79%), Gaps = 2/467 (0%)
Query: 263 NIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSIN 322
+IAR +LL P LDE+ L + L M +++VDYAD YFQ+T++E W LEEGIVK+G+F+I+
Sbjct: 6 SIARELLLAPSGLDERDLERTLARMTEHQVDYADLYFQYTRHEGWSLEEGIVKSGSFNID 65
Query: 323 QGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYS 382
QGVGVRA++G+KTAF YSD+I+ L+ A + R I + + + +LY
Sbjct: 66 QGVGVRAVAGEKTAFAYSDEINTEALMRAADAVREIGRSGGSGSVGSVSPRSSR--ALYP 123
Query: 383 FTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRP 442
D +S+ K+ LLE+VEK+AR DP +I+V+A L+ EYDVI + R+DG+ AD+RP
Sbjct: 124 ALDPCASLEAAAKVALLEKVEKLARAMDPSIIQVMAGLASEYDVIYLARHDGVRAADVRP 183
Query: 443 LVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAG 502
LV++ V +I E++GRRE G+SG GGR + ++FTD ++E+ V +V A +NL+A+PAPAG
Sbjct: 184 LVRMSVYVIAEQDGRRESGSSGGGGRVDLSHFTDEVVERYVRQAVEQAKVNLQARPAPAG 243
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
M VVLGPGWPG+LLHEAIGHGLEGDFNRKG+SAFS IG+R+AS +T+VD+GTLA RR
Sbjct: 244 QMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGTSAFSGRIGQRVASPGVTVVDDGTLAARR 303
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+ IDDEGN T+ T LIE+GILKGYMQD MNARLM ++ TGN RRES+AHIP+PRMTNT
Sbjct: 304 GSLAIDDEGNQTERTMLIEDGILKGYMQDEMNARLMGVAPTGNGRRESYAHIPMPRMTNT 363
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML G+ P+EII+SVK+GLYA NF GGQVDIT+GKFVFSAS+A+ I++GK++YPVKGAT
Sbjct: 364 YMLAGQHDPQEIIASVKDGLYAVNFGGGQVDITSGKFVFSASEAWRIEDGKLSYPVKGAT 423
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKID 729
LIG+GP++L VSMIGND++LD GVGVCGK+GQ VPVGVGQPTL+ID
Sbjct: 424 LIGNGPDVLHYVSMIGNDLQLDAGVGVCGKEGQSVPVGVGQPTLRID 470
>gi|148360397|ref|YP_001251604.1| TldD protein [Legionella pneumophila str. Corby]
gi|296106536|ref|YP_003618236.1| TldD protein [Legionella pneumophila 2300/99 Alcoy]
gi|148282170|gb|ABQ56258.1| TldD protein [Legionella pneumophila str. Corby]
gi|295648437|gb|ADG24284.1| TldD protein [Legionella pneumophila 2300/99 Alcoy]
gi|307609745|emb|CBW99257.1| TldD protein [Legionella pneumophila 130b]
Length = 480
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 283/479 (59%), Positives = 368/479 (76%), Gaps = 8/479 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L IA++ILL P LDE + K+ MF VD AD YFQ E+W LE+ VK+GNFS+
Sbjct: 5 LAIAKNILLTPASLDEAGIEKLFKTMFNRNVDDADLYFQSCSYESWYLEDSEVKSGNFSL 64
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVG+RA+SGDKT F Y DDI +++ A + RSIA + + +K + K +N Y
Sbjct: 65 DKGVGIRAVSGDKTGFAYCDDILLPSMLRAADAARSIALSGSKTVPAVK-VLKASVNR-Y 122
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + ++ +EKI LLE ++K AR DPRVI+V A L+G Y+V+++ DG ++AD+R
Sbjct: 123 ESLNPLEGMSKQEKIALLEAIDKEARSLDPRVIQVNATLTGCYEVVMVANMDGQMMADVR 182
Query: 442 PLVQLFVTIIVE-KNGRREIGNSGCGGRYNYNYFTDMILEKCVS---NSVNSALINLEAK 497
PLV + V++IVE +GRRE SG GGR Y+YFT+ E +S +V AL NL+A+
Sbjct: 183 PLVSINVSVIVEDSHGRRESARSGGGGRVAYSYFTEK--ENALSYAREAVREALTNLKAE 240
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
PAPAG M VVLGPGWPG+LLHEA+GHGLEGDFNRKG SAFS +G+++A+ +T+VD+GT
Sbjct: 241 PAPAGTMPVVLGPGWPGVLLHEAVGHGLEGDFNRKGLSAFSGRLGQQVAAAGVTVVDDGT 300
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
L NRRGS+ IDDEG P+QCTTLI+NGIL YMQD +NA+LM M TGN RRES+AH+P+P
Sbjct: 301 LENRRGSLTIDDEGTPSQCTTLIDNGILVNYMQDKLNAKLMGMQSTGNCRRESYAHVPMP 360
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNTYML+G++ P+EIIS+VK GLYA NF GGQVDIT+G+FVFSAS+AY+I+NGKIT P
Sbjct: 361 RMTNTYMLSGQYDPQEIISTVKKGLYAVNFGGGQVDITSGQFVFSASEAYLIENGKITKP 420
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
VKGATLIG+GP+++KK+SMIGND+ LD G+GVCGK+GQ VPVGVGQPTLKID++TVGGT
Sbjct: 421 VKGATLIGNGPDVMKKISMIGNDLALDRGIGVCGKEGQSVPVGVGQPTLKIDALTVGGT 479
>gi|358636080|dbj|BAL23377.1| Zn-dependent peptidase, potential modulator of DNA gyrase [Azoarcus
sp. KH32C]
Length = 481
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 290/484 (59%), Positives = 372/484 (76%), Gaps = 4/484 (0%)
Query: 253 LISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEG 312
+ Q+N+ L +A LL P+ L L K+ G + ++++DYAD YFQ+ ++E W LEEG
Sbjct: 1 MTQQQNL--LQVADRFLLNPYGLGGAELEKVFGKLMRHRLDYADLYFQYQRSEGWSLEEG 58
Query: 313 IVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNI 372
IVK+G+F+I QGVGVRAISG+KTAF YSDDI+ L+ A ++ + A GK +
Sbjct: 59 IVKSGSFNIEQGVGVRAISGEKTAFAYSDDIAMPALVAAAEA--TRAIAEAGKQSRVAIA 116
Query: 373 KKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRN 432
I LY D ++S++ K+KLLER+E AR +D RV +V+A+++G ++V+L+ R+
Sbjct: 117 PYSNIVPLYRGDDPLASLDDTAKVKLLERLEGFARAEDSRVSQVMAHIAGTWEVVLVARS 176
Query: 433 DGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALI 492
DG + AD+RPLV++ VT+I+E GRRE G+ G GGRY+Y YF D L + +V+ A +
Sbjct: 177 DGHMAADVRPLVRVSVTVIMEDKGRREQGSGGGGGRYDYTYFDDERLREYARAAVHQARV 236
Query: 493 NLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITI 552
NL+A PAPAG M VVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFS IG+++A+K +T+
Sbjct: 237 NLDASPAPAGTMTVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSGRIGQQVAAKGVTV 296
Query: 553 VDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFA 612
VD+GTL +RRGS+ +DDEGNPT+ T LIE+GIL GYMQD MNARLM + TGN RRESFA
Sbjct: 297 VDDGTLPDRRGSLTVDDEGNPTERTVLIEDGILTGYMQDTMNARLMGVKPTGNGRRESFA 356
Query: 613 HIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNG 672
H+P+PRMTNTYMLNG PEEII SVK GLYA NF GGQVDIT+GKFVFS ++AY+I++G
Sbjct: 357 HLPLPRMTNTYMLNGDKAPEEIIKSVKKGLYAANFGGGQVDITSGKFVFSTAEAYLIEDG 416
Query: 673 KITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSIT 732
K+T PVKGATLIG+GP+ L +V+MIGNDM LDPGVG CGKDGQ VPVGVGQPTL+ID +T
Sbjct: 417 KVTRPVKGATLIGNGPDALTRVAMIGNDMALDPGVGTCGKDGQSVPVGVGQPTLRIDGLT 476
Query: 733 VGGT 736
VGGT
Sbjct: 477 VGGT 480
>gi|285019218|ref|YP_003376929.1| modulator of DNA gyrase [Xanthomonas albilineans GPE PC73]
gi|283474436|emb|CBA16937.1| putative modulator of dna gyrase protein [Xanthomonas albilineans
GPE PC73]
Length = 480
Score = 583 bits (1502), Expect = e-163, Method: Compositional matrix adjust.
Identities = 271/480 (56%), Positives = 356/480 (74%), Gaps = 3/480 (0%)
Query: 258 NIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTG 317
N H L +A + LL P LD L + G + VD+ D YFQ ++ ENW +E+GIVK G
Sbjct: 2 NDHTLQLAETRLLLPAGLDASSLERAFGTLLGPGVDFGDLYFQHSRRENWSVEDGIVKDG 61
Query: 318 NFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKI 377
SI QGVGVRAISG+KT F YSDDI + L+ A +S R+I+ +G + + +++
Sbjct: 62 AHSIEQGVGVRAISGEKTGFAYSDDIHHDALLVAARSARAISR--DGGAQATQALQRGGA 119
Query: 378 NSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIV 437
LY D + S++ K++LL +++ R DPRV +V+ +L+G D +L+ R+DG++
Sbjct: 120 RMLYPALDPVDSMDHARKLELLRHLDQFVRAADPRVQQVMVSLTGSVDTVLVARSDGVLA 179
Query: 438 ADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYN-YFTDMILEKCVSNSVNSALINLEA 496
AD+RPLV+L V +IVE+ GRRE G +G GGRY+Y F D E ++ AL+NLEA
Sbjct: 180 ADVRPLVRLNVQVIVEQQGRRESGYAGGGGRYDYAVLFADGRPEAYAKEALRQALVNLEA 239
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
PAPAG+M+VVLGPGWPG+LLHEA+GHGLEGDFNRKG+S ++ IG+R+AS ++IVD+G
Sbjct: 240 VPAPAGVMQVVLGPGWPGVLLHEAVGHGLEGDFNRKGTSVYAGRIGQRVASPGVSIVDDG 299
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL RGS+N+DDEG T CT+LIE+G+L GYMQD +NARLM ++ TGN RRESFAH+P+
Sbjct: 300 TLDGCRGSLNVDDEGTQTHCTSLIEDGVLVGYMQDTLNARLMGVAPTGNGRRESFAHLPM 359
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYM G+ P+E+I SVK GLYA NF GGQVDIT+GK+VFSA++AY+I++GKIT
Sbjct: 360 PRMTNTYMRAGQHDPQEMIRSVKKGLYAVNFGGGQVDITSGKYVFSATEAYLIEDGKITA 419
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG+GP ++KVSMIGND+ LD GVGVCGK GQ VPVGVGQP+L ID +TVGGT
Sbjct: 420 PVKGATLIGNGPETMQKVSMIGNDLALDEGVGVCGKHGQSVPVGVGQPSLLIDGLTVGGT 479
>gi|406940854|gb|EKD73501.1| hypothetical protein ACD_45C00296G0001 [uncultured bacterium]
Length = 481
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 284/480 (59%), Positives = 364/480 (75%), Gaps = 5/480 (1%)
Query: 260 HPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNF 319
H L+IAR LL+P L + L +L N+ +D AD YFQ T +E W+LE+GI+K G++
Sbjct: 3 HFLDIARHDLLDPAGLTDNQLQTVLSNVLGGAIDNADLYFQSTYSETWVLEDGIIKGGSY 62
Query: 320 SINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINS 379
+I++GVGVRA+SG+KT F YSDDI L A ++ +SI Q G + IK K +
Sbjct: 63 NIDRGVGVRAMSGEKTGFAYSDDILIPALDQAAQAAKSIGKQ--GGHQAIKAWKWTAGHE 120
Query: 380 LYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVAD 439
LY + + S+N EK+ LL+RV+ AR +DPRV++V L+ EY+ +LI +DG + AD
Sbjct: 121 LYLPINPLRSLNETEKVALLQRVDSYARQQDPRVVQVNVTLAAEYETVLIMASDGHLAAD 180
Query: 440 IRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF--TDMILEKCVSNSVNSALINLEAK 497
+RPLV+L ++++VE+NGRRE G +G GGRY+Y+ DM L+ +V AL+NL A
Sbjct: 181 VRPLVRLNISVVVEQNGRREQGYAGGGGRYDYDELIKNDMGLQ-FAREAVRQALVNLNAV 239
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
APAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKG+S FS IG+ +AS T+VD+GT
Sbjct: 240 DAPAGTMPVVLGPGWPGVLLHEAIGHGLEGDFNRKGTSVFSGRIGQMVASPLCTVVDDGT 299
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
L NRRGS+N+DDEG PTQCT LIE GIL+ Y+QD NARLM M TGN RRES+A+ P+P
Sbjct: 300 LPNRRGSLNVDDEGVPTQCTVLIEKGILRNYIQDKRNARLMGMQSTGNGRRESYAYTPMP 359
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNTYML GK PEEII+SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I++GKIT P
Sbjct: 360 RMTNTYMLPGKSTPEEIIASVKKGIYAVNFGGGQVDITSGKFVFSASEAYLIEDGKITVP 419
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
VKGATLIG+GP++L +VSM+GND++LD G+GVCGKDGQ VPVGVGQPTL+ID++TVGGTN
Sbjct: 420 VKGATLIGNGPDVLTRVSMVGNDLQLDTGIGVCGKDGQSVPVGVGQPTLRIDALTVGGTN 479
>gi|54293924|ref|YP_126339.1| TldD protein [Legionella pneumophila str. Lens]
gi|53753756|emb|CAH15214.1| TldD protein [Legionella pneumophila str. Lens]
Length = 480
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 282/479 (58%), Positives = 367/479 (76%), Gaps = 8/479 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L IA++ILL P LDE + K+ MF VD AD YFQ E+W LE+ VK+GNFS+
Sbjct: 5 LAIAKNILLTPASLDEVGIEKLFKTMFNRNVDDADLYFQSCSYESWYLEDSEVKSGNFSL 64
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVG+RA+SGDKT F Y DDI +++ A + RSIA + + + N+ K +N Y
Sbjct: 65 DKGVGIRAVSGDKTGFAYCDDILLPSMLRAADAARSIALSGSKTVPAV-NVLKASVNR-Y 122
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + ++ +EKI LLE ++K AR DPRVI+V A L+G Y+V+++ DG ++AD+R
Sbjct: 123 ESLNPLEGMSKQEKIALLEAIDKEARSLDPRVIQVNATLTGCYEVVMVANMDGQMMADVR 182
Query: 442 PLVQLFVTIIVE-KNGRREIGNSGCGGRYNYNYFTDMILEKCVS---NSVNSALINLEAK 497
PLV + V++IVE +GRRE SG GGR Y+YFT+ E +S +V AL NL+A+
Sbjct: 183 PLVSINVSVIVEDSHGRRESARSGGGGRVAYSYFTEK--ENALSYAREAVREALTNLKAE 240
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
PAPAG M VVLGPGWPG+LLHEA+GHGLEGDFNRKG SAFS +G+++A+ +T+VD+GT
Sbjct: 241 PAPAGTMPVVLGPGWPGVLLHEAVGHGLEGDFNRKGLSAFSGRLGQQVAAAGVTVVDDGT 300
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
L NRRGS+ IDDEG P+QCTTLI+NGIL YMQD +NA+LM M TGN RRES+AH+P+P
Sbjct: 301 LENRRGSLTIDDEGTPSQCTTLIDNGILVNYMQDKLNAKLMGMQSTGNCRRESYAHVPMP 360
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNTYML+G++ P+EII +VK GLYA NF GGQVDIT+G+FVFSAS+AY+I+NGKIT P
Sbjct: 361 RMTNTYMLSGQYDPQEIICTVKKGLYAVNFGGGQVDITSGQFVFSASEAYLIENGKITKP 420
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
VKGATLIG+GP+++KK+SMIGND+ LD G+GVCGK+GQ VPVGVGQPTLKID++TVGGT
Sbjct: 421 VKGATLIGNGPDVMKKISMIGNDLALDRGIGVCGKEGQSVPVGVGQPTLKIDALTVGGT 479
>gi|374261529|ref|ZP_09620110.1| hypothetical protein LDG_6501 [Legionella drancourtii LLAP12]
gi|363538012|gb|EHL31425.1| hypothetical protein LDG_6501 [Legionella drancourtii LLAP12]
Length = 480
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 283/480 (58%), Positives = 366/480 (76%), Gaps = 8/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L A+ ILL P LDE + K+ M N +D AD YFQ +E+W LE+ +VK+G++S+
Sbjct: 5 LTTAKQILLAPASLDETGIEKLFKTMMSNHIDDADLYFQSCSSESWYLEDSVVKSGSYSL 64
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVG+RA+SGDKT F Y DDI +++ A + RSIA ++ + ++K I S Y
Sbjct: 65 DRGVGIRAVSGDKTGFAYCDDILLPSMLRAADAARSIALTGAKAVQPV-HVKTIA-ESRY 122
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ I ++ +EKI LLE ++K AR DPRVI+V A+LSG Y+V+++ G +VAD+R
Sbjct: 123 RGLNPIEGMSKQEKIALLEAIDKEARSIDPRVIQVNASLSGCYEVVMVADMHGQMVADVR 182
Query: 442 PLVQLFVTIIVE-KNGRREIGNSGCGGRYNYNYFTDMILEKCVS---NSVNSALINLEAK 497
PLV + V++IVE KNGRRE SG GGR Y+YFT+ E +S +V ALINL+AK
Sbjct: 183 PLVSVNVSVIVEDKNGRRESARSGGGGRMAYSYFTEK--ENALSYAREAVREALINLDAK 240
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
PAPAG M VVLGPGWPG+LLHEA+GHGLEGDFNRKG SAFS IG+++A+ +T+VD+GT
Sbjct: 241 PAPAGTMPVVLGPGWPGVLLHEAVGHGLEGDFNRKGLSAFSGRIGQQVAAPGVTVVDDGT 300
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
L RRGS+ IDDEG +QCTTLI+NG+L YMQD +NA+LM M TGN RRES+AH+P+P
Sbjct: 301 LKERRGSLTIDDEGTASQCTTLIDNGVLVNYMQDKLNAKLMGMQSTGNCRRESYAHVPMP 360
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNTYML G+ PEEII SV+ GLYA NF GGQVDIT+G+FVFSAS+AY+I+NGKIT P
Sbjct: 361 RMTNTYMLAGQHDPEEIIRSVERGLYAVNFGGGQVDITSGQFVFSASEAYLIENGKITAP 420
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
VKGATLIG+GP+++KK+SMIGND+ LD G+GVCGK+GQ VPVGVGQPTLKID++TVGGT+
Sbjct: 421 VKGATLIGNGPDVMKKISMIGNDLALDRGIGVCGKEGQSVPVGVGQPTLKIDALTVGGTS 480
>gi|54296972|ref|YP_123341.1| TldD protein [Legionella pneumophila str. Paris]
gi|53750757|emb|CAH12164.1| TldD protein [Legionella pneumophila str. Paris]
Length = 480
Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust.
Identities = 282/479 (58%), Positives = 367/479 (76%), Gaps = 8/479 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L IA++ILL P LDE + K+ MF VD AD YFQ E+W LE+ VK+GNFS+
Sbjct: 5 LAIAKNILLTPASLDEVGIEKLFKTMFNRNVDDADLYFQSCSYESWYLEDSEVKSGNFSL 64
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVG+RA+SGDKT F Y DDI +++ A + RSIA + + +K + K +N Y
Sbjct: 65 DKGVGIRAVSGDKTGFAYCDDILLPSMLRAADAARSIALSGSKTVPAVK-VLKASVNR-Y 122
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + ++ +EKI LLE ++K AR DPRVI+V A L+G Y+V+++ DG ++AD+R
Sbjct: 123 ESLNPLEGMSKQEKIALLEAIDKEARSIDPRVIQVNATLTGCYEVVMVANMDGQMMADVR 182
Query: 442 PLVQLFVTIIVE-KNGRREIGNSGCGGRYNYNYFTDMILEKCVS---NSVNSALINLEAK 497
PLV + V++IVE +GRRE SG GGR Y+YFT+ E +S +V AL NL+A+
Sbjct: 183 PLVSINVSVIVEDSHGRRESARSGGGGRVAYSYFTEK--ENALSYAREAVREALTNLKAE 240
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
PAPAG M VVLGPGWPG+LLHEA+GHGLEGDFNRKG SAFS +G+++A+ +T+VD+GT
Sbjct: 241 PAPAGTMPVVLGPGWPGVLLHEAVGHGLEGDFNRKGLSAFSGRLGQQVAAAGVTVVDDGT 300
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
L NRRGS+ IDDEG P+QCTTLI+NGIL YMQD +NA+LM M TGN RRES+AH+P+P
Sbjct: 301 LENRRGSLTIDDEGTPSQCTTLIDNGILVNYMQDKLNAKLMGMQSTGNCRRESYAHVPMP 360
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNTYML+G++ P+EII +VK GLYA NF GGQVDIT+G+FVFSAS+AY+I+NGKIT P
Sbjct: 361 RMTNTYMLSGQYDPQEIIRTVKKGLYAVNFGGGQVDITSGQFVFSASEAYLIENGKITKP 420
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
VKGATLIG+GP+++KK+SMIGND+ LD G+GVCGK+GQ VPVGVGQPTLKID++TVGGT
Sbjct: 421 VKGATLIGNGPDVMKKISMIGNDLALDRGIGVCGKEGQSVPVGVGQPTLKIDALTVGGT 479
>gi|52841186|ref|YP_094985.1| TldD protein [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|378776904|ref|YP_005185341.1| TldD protein [Legionella pneumophila subsp. pneumophila ATCC 43290]
gi|397666631|ref|YP_006508168.1| putative peptidase [Legionella pneumophila subsp. pneumophila]
gi|52628297|gb|AAU27038.1| TldD protein [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|364507718|gb|AEW51242.1| TldD protein [Legionella pneumophila subsp. pneumophila ATCC 43290]
gi|395130042|emb|CCD08275.1| putative peptidase [Legionella pneumophila subsp. pneumophila]
Length = 480
Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust.
Identities = 282/479 (58%), Positives = 367/479 (76%), Gaps = 8/479 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L IA++ILL P LDE + K+ MF VD AD YFQ E+W LE+ VK+GNFS+
Sbjct: 5 LAIAKNILLTPASLDEVGIEKLFKTMFNRNVDDADLYFQSCSYESWYLEDSEVKSGNFSL 64
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVG+RA+SGDKT F Y DDI +++ A + RSIA + + +K + K +N Y
Sbjct: 65 DKGVGIRAVSGDKTGFAYCDDILLPSMLRAADAARSIALSGSKTVPAVK-VLKASVNR-Y 122
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + ++ +EKI LLE ++K AR DPRVI+V A L+G Y+V+++ DG ++AD+R
Sbjct: 123 ESLNPLEGMSKQEKIALLEAIDKEARSLDPRVIQVNATLTGCYEVVMVANMDGQMMADVR 182
Query: 442 PLVQLFVTIIVE-KNGRREIGNSGCGGRYNYNYFTDMILEKCVS---NSVNSALINLEAK 497
PLV + V++IVE +GRRE SG GGR Y+YFT+ E +S +V AL NL+A+
Sbjct: 183 PLVSINVSVIVEDSHGRRESARSGGGGRVAYSYFTEK--ENALSYAREAVREALTNLKAE 240
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
PAPAG M VVLGPGWPG+LLHEA+GHGLEGDFNRKG SAFS +G+++A+ +T+VD+GT
Sbjct: 241 PAPAGTMPVVLGPGWPGVLLHEAVGHGLEGDFNRKGLSAFSGRLGQQVAAAGVTVVDDGT 300
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
L NRRGS+ IDDEG P+QCTTLI+NGIL YMQD +NA+LM M TGN RRES+AH+P+P
Sbjct: 301 LENRRGSLTIDDEGTPSQCTTLIDNGILVNYMQDKLNAKLMGMQSTGNCRRESYAHVPMP 360
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNTYML+G++ P+EII +VK GLYA NF GGQVDIT+G+FVFSAS+AY+I+NGKIT P
Sbjct: 361 RMTNTYMLSGQYDPQEIIRTVKKGLYAVNFGGGQVDITSGQFVFSASEAYLIENGKITKP 420
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
VKGATLIG+GP+++KK+SMIGND+ LD G+GVCGK+GQ VPVGVGQPTLKID++TVGGT
Sbjct: 421 VKGATLIGNGPDVMKKISMIGNDLALDRGIGVCGKEGQSVPVGVGQPTLKIDALTVGGT 479
>gi|319779293|ref|YP_004130206.1| TldD protein [Taylorella equigenitalis MCE9]
gi|317109317|gb|ADU92063.1| TldD protein [Taylorella equigenitalis MCE9]
Length = 488
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 282/486 (58%), Positives = 366/486 (75%), Gaps = 4/486 (0%)
Query: 251 CILISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILE 310
IL S+ P+ A+ ILL+ + + + K LG + +K +YAD YFQ+T +ENW LE
Sbjct: 3 SILTSES---PIVHAKKILLDDNGISLEDIAKALGLIHSHKTNYADLYFQYTCSENWSLE 59
Query: 311 EGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIK 370
EGIVKTG FSI+QGVGVRA++ +KTAF YSD++S + L+ + +SIA Q + + I K
Sbjct: 60 EGIVKTGGFSISQGVGVRAVAHEKTAFSYSDELSADILLKNADTVKSIATQGSASVYIPK 119
Query: 371 NIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILIT 430
+ LY+ D I+S+ EK+++L +VEK AR P + +V+A L E++V+L+
Sbjct: 120 Q-GLVDTQKLYAPIDPINSMTSEEKLEILNKVEKYARAMSPEIKQVMAGLGSEFEVVLVA 178
Query: 431 RNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSA 490
G + ADIRPLV+L +T+I E+NGRRE NSG GGR+ NYF+D I++ V +V+ A
Sbjct: 179 STGGRLEADIRPLVRLSLTVIAERNGRRERDNSGGGGRFGLNYFSDEIIKDYVKKAVDEA 238
Query: 491 LINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEI 550
LINLEA+PAPAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+++ASK +
Sbjct: 239 LINLEAQPAPAGEMTVVLGSGWPGVLLHEAVGHGLEGDFNRKGTSVFSGRIGEQVASKGV 298
Query: 551 TIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRES 610
T++D+GT+ +RRGS+NIDDEGNPTQ LIE+GIL GY+QD NA LMNM ITGNARRES
Sbjct: 299 TVIDDGTIPDRRGSLNIDDEGNPTQRNVLIEDGILCGYLQDTQNASLMNMPITGNARRES 358
Query: 611 FAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIK 670
+AH+P+PRMTNT+ML G EEII SVK G+YA NFSGGQVDIT+GKFVFSAS+AY+I+
Sbjct: 359 YAHLPMPRMTNTFMLGGTHKHEEIIESVKKGIYAANFSGGQVDITSGKFVFSASEAYLIE 418
Query: 671 NGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS 730
NGKIT P+ GATLIG G + + KVSMI ++M LD G+G CGKDGQ VPVGVG PT+++D
Sbjct: 419 NGKITSPIVGATLIGSGIDTMNKVSMIADNMSLDSGIGTCGKDGQSVPVGVGMPTIRVDG 478
Query: 731 ITVGGT 736
ITVGGT
Sbjct: 479 ITVGGT 484
>gi|340783273|ref|YP_004749880.1| TldE/TldD proteolytic complex protein TldD [Acidithiobacillus
caldus SM-1]
gi|340557424|gb|AEK59178.1| TldD protein, part of proposed TldE/TldD proteolytic complex
[Acidithiobacillus caldus SM-1]
Length = 481
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 271/477 (56%), Positives = 355/477 (74%), Gaps = 3/477 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L IA++ LL P ++ E L ++ + + +D AD YFQ++++E + LEEG+VK+G+ I
Sbjct: 6 LEIAKATLLAPGNIGEPALERVFAQLSRRALDDADLYFQYSRSEGFSLEEGVVKSGSHHI 65
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QGVGVRAI G++ YSD+I+ + L+ A ++ R+I + S + ++ ++ + LY
Sbjct: 66 EQGVGVRAIQGERQGLAYSDEIAVDALLGAAEAARAIVHHSGAQRSLV--WQRRQGLELY 123
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
D ++ + EK+ +LERVE AR DPRV++V+A+LS ++ IL+ R DG + AD+R
Sbjct: 124 PPVDPLADLASEEKVAVLERVEAAARAADPRVVQVMASLSARFEAILVARLDGSMAADVR 183
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAP 500
PLV+L V +IVE GRRE G +G GGR +Y F E +V AL+NLEA+ AP
Sbjct: 184 PLVRLNVLVIVESGGRREQGTAGGGGRSDYRSFLAGGAAEHYAREAVRQALVNLEARDAP 243
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG M VVLGPGWPGILLHEAIGHGLEGDFNRKG+SAFS +G+R+A+ +T+VD+GTL+
Sbjct: 244 AGTMDVVLGPGWPGILLHEAIGHGLEGDFNRKGTSAFSGRVGERVAAPGVTVVDDGTLSG 303
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+N+DDEG PTQCT LIE+G LKGY+QD +NARLM TGN RRES+AH+P+PRMT
Sbjct: 304 RRGSLNVDDEGTPTQCTVLIEDGFLKGYLQDTLNARLMGTHSTGNGRRESYAHLPMPRMT 363
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYM G P EII+SVK GLYA NF GGQVDITNGKFVFSAS+AY+I+NG+IT+PVKG
Sbjct: 364 NTYMRAGDRDPREIIASVKKGLYAVNFGGGQVDITNGKFVFSASEAYLIENGRITHPVKG 423
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
ATLIG+GP++L +V M+GND+ LD GVG CGKDGQ VPVGVGQPTLKI +TVGGT
Sbjct: 424 ATLIGNGPDVLTRVEMVGNDLALDTGVGTCGKDGQSVPVGVGQPTLKIRDLTVGGTQ 480
>gi|397663510|ref|YP_006505048.1| putative peptidase [Legionella pneumophila subsp. pneumophila]
gi|395126921|emb|CCD05104.1| putative peptidase [Legionella pneumophila subsp. pneumophila]
Length = 480
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 281/479 (58%), Positives = 366/479 (76%), Gaps = 8/479 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L IA++ILL P LDE + K+ MF VD AD YFQ E+W LE+ VK+GNFS+
Sbjct: 5 LAIAKNILLTPASLDEVGIEKLFKTMFNRNVDDADLYFQSCSYESWYLEDSEVKSGNFSL 64
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVG+RA+SGDKT F Y DDI +++ A + RSIA + + +K + K +N Y
Sbjct: 65 DKGVGIRAVSGDKTGFAYCDDILLPSMLRAADAARSIALSGSKTVPAVK-VLKASVNR-Y 122
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + ++ +EKI LLE ++K AR DPRVI+V A L+G Y+V+++ DG ++AD+R
Sbjct: 123 ESLNPLEGMSKQEKIALLEAIDKEARSLDPRVIQVNATLTGCYEVVMVANMDGQMMADVR 182
Query: 442 PLVQLFVTIIVE-KNGRREIGNSGCGGRYNYNYFTDMILEKCVS---NSVNSALINLEAK 497
PLV + V++IVE +GRRE SG GGR Y+YFT+ E +S +V AL NL+A+
Sbjct: 183 PLVSINVSVIVEDSHGRRESARSGGGGRVAYSYFTEK--ENALSYAREAVREALTNLQAE 240
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
PAPAG M VVLGPGWPG+LLHEA+GHGLEGDFNRKG SAFS +G+++A+ +T+VD+GT
Sbjct: 241 PAPAGTMPVVLGPGWPGVLLHEAVGHGLEGDFNRKGLSAFSGRLGQQVAAAGVTVVDDGT 300
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
L NRRGS+ IDDEG P+QCTTLI+NGIL YMQD +NA+LM M TGN RRES+AH+P+P
Sbjct: 301 LENRRGSLTIDDEGTPSQCTTLIDNGILVNYMQDKLNAKLMGMQSTGNCRRESYAHVPMP 360
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNTYML G++ P+EII +V+ GLYA NF GGQVDIT+G+FVFSAS+AY+I+NGKIT P
Sbjct: 361 RMTNTYMLAGQYDPQEIIRTVQKGLYAVNFGGGQVDITSGQFVFSASEAYLIENGKITKP 420
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
VKGATLIG+GP+++KK+SMIGND+ LD G+GVCGK+GQ VPVGVGQPTLKID++TVGGT
Sbjct: 421 VKGATLIGNGPDVMKKISMIGNDLALDRGIGVCGKEGQSVPVGVGQPTLKIDALTVGGT 479
>gi|255019900|ref|ZP_05291975.1| TldD protein, part of proposed TldE/TldD proteolytic complex
[Acidithiobacillus caldus ATCC 51756]
gi|254970680|gb|EET28167.1| TldD protein, part of proposed TldE/TldD proteolytic complex
[Acidithiobacillus caldus ATCC 51756]
Length = 481
Score = 580 bits (1494), Expect = e-162, Method: Compositional matrix adjust.
Identities = 271/477 (56%), Positives = 355/477 (74%), Gaps = 3/477 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L IA++ LL P ++ E L ++ + + +D AD YFQ++++E + LEEG+VK+G+ I
Sbjct: 6 LEIAKATLLAPGNIGEPALERVFAQLSRRALDDADLYFQYSRSEGFSLEEGVVKSGSHHI 65
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QGVGVRAI G++ YSD+I+ + L+ A ++ R+I + S + ++ ++ + LY
Sbjct: 66 EQGVGVRAIQGERQGLAYSDEIAVDALLGAAEAARAIVHHSGEQRSLV--WQRRQGLELY 123
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
D ++ + EK+ +LERVE AR DPRV++V+A+LS ++ IL+ R DG + AD+R
Sbjct: 124 PPVDPLADLASEEKVAVLERVEAAARAADPRVVQVMASLSARFEAILVARLDGSMAADVR 183
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAP 500
PLV+L V +IVE GRRE G +G GGR +Y F E +V AL+NLEA+ AP
Sbjct: 184 PLVRLNVLVIVESGGRREQGTAGGGGRSDYRSFLAGGAAEHYAREAVRQALVNLEARDAP 243
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG M VVLGPGWPGILLHEAIGHGLEGDFNRKG+SAFS +G+R+A+ +T+VD+GTL+
Sbjct: 244 AGTMDVVLGPGWPGILLHEAIGHGLEGDFNRKGTSAFSGRVGERVAAPGVTVVDDGTLSG 303
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+N+DDEG PTQCT LIE+G LKGY+QD +NARLM TGN RRES+AH+P+PRMT
Sbjct: 304 RRGSLNVDDEGTPTQCTVLIEDGFLKGYLQDTLNARLMGTHSTGNGRRESYAHLPMPRMT 363
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYM G P EII+SVK GLYA NF GGQVDITNGKFVFSAS+AY+I+NG+IT+PVKG
Sbjct: 364 NTYMRAGDRDPREIIASVKKGLYAVNFGGGQVDITNGKFVFSASEAYLIENGRITHPVKG 423
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
ATLIG+GP++L +V M+GND+ LD GVG CGKDGQ VPVGVGQPTLKI +TVGGT
Sbjct: 424 ATLIGNGPDVLTRVEMVGNDLALDTGVGTCGKDGQSVPVGVGQPTLKIRDLTVGGTQ 480
>gi|388456835|ref|ZP_10139130.1| TldD protein [Fluoribacter dumoffii Tex-KL]
Length = 480
Score = 580 bits (1494), Expect = e-162, Method: Compositional matrix adjust.
Identities = 285/480 (59%), Positives = 367/480 (76%), Gaps = 8/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L A+ ILL P LDE + K+ M + +D AD YFQ E+W LE+ +VK+G+FS+
Sbjct: 5 LTTAKKILLAPAALDETGIEKLFRTMMSHHIDDADLYFQSCSYESWYLEDSVVKSGSFSL 64
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVG+RA+SGDKT F Y DDI +++ A + RSIA + I+ I ++K I + Y
Sbjct: 65 DRGVGIRAVSGDKTGFAYCDDILLPSMLRAADAARSIALTGSKPIQSI-HVKGAAI-TRY 122
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ I ++ +EKI LLE ++K AR DPRVI+V A+LSG Y+V+++ G ++AD+R
Sbjct: 123 QGLNPIEGMSKQEKIALLEAIDKEARRIDPRVIQVNASLSGCYEVVMVAGMHGQMIADVR 182
Query: 442 PLVQLFVTIIVE-KNGRREIGNSGCGGRYNYNYFTDMILEKCVS---NSVNSALINLEAK 497
PLV + V++IVE KNG+RE SG GGR Y+YF + E +S +V ALINLEA+
Sbjct: 183 PLVSINVSVIVEDKNGKRESARSGGGGRVPYSYFLEK--ENALSYAREAVREALINLEAQ 240
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
PAPAG M VVLGPGWPG+LLHEA+GHGLEGDFNRKG SAFS IG+++A+ +T+VD+GT
Sbjct: 241 PAPAGTMPVVLGPGWPGVLLHEAVGHGLEGDFNRKGLSAFSGRIGQQVAAPGVTVVDDGT 300
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
L +RRGSI IDDEG P+QCTTLIENGIL YMQD +NA+LM M TGN RRES+AH+P+P
Sbjct: 301 LKDRRGSITIDDEGTPSQCTTLIENGILVNYMQDKLNAKLMGMQSTGNCRRESYAHVPMP 360
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNTYML G+ PEEII SV+ GLYA NF GGQVDIT+G+FVFSAS+AY+I+NGKIT P
Sbjct: 361 RMTNTYMLAGQHDPEEIIRSVQRGLYAVNFGGGQVDITSGQFVFSASEAYLIENGKITAP 420
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
VKGATLIG+GP+++KK+SMIGND+ LD G+GVCGK+GQ VPVGVGQPTLKID++TVGGT+
Sbjct: 421 VKGATLIGNGPDVMKKISMIGNDLGLDRGIGVCGKEGQSVPVGVGQPTLKIDALTVGGTS 480
>gi|198284352|ref|YP_002220673.1| peptidase U62 modulator of DNA gyrase [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|218666473|ref|YP_002427014.1| tldD protein [Acidithiobacillus ferrooxidans ATCC 23270]
gi|198248873|gb|ACH84466.1| peptidase U62 modulator of DNA gyrase [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|218518686|gb|ACK79272.1| tldD protein [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 481
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 278/478 (58%), Positives = 363/478 (75%), Gaps = 5/478 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L IAR+ L P + E L K+ G + +D AD YFQ++++E + LEEG+VK+G+ SI
Sbjct: 6 LEIARATLFAPGGISEGALEKVFGRLSHRALDDADLYFQYSRSEGFSLEEGVVKSGSHSI 65
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QGVGVRA+SG++ YSD+I+ + L+ A + R+I ++ G+ K + ++ + +LY
Sbjct: 66 EQGVGVRAVSGERQGLAYSDEIAVDALLTAADAARAIVHRP-GQTKGLVWQQRPGL-ALY 123
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
D ++SI+ EKI LLERVE+ AR DPR+++V+A+L+ ++ +L+ R DG + AD+R
Sbjct: 124 PPVDPLASISNSEKIALLERVERAARACDPRIVQVMASLNARFEAVLVARLDGTMAADVR 183
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF--TDMILEKCVSNSVNSALINLEAKPA 499
PLV+L V+ I E+ GRRE G++G GGRY+Y F DM E + AL+NLEA+ A
Sbjct: 184 PLVRLNVSAIAEQGGRREQGSAGGGGRYDYQAFLQGDMA-EGFAREAARQALVNLEAEAA 242
Query: 500 PAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLA 559
PAG M+VVLGPGWPG+LLHEAIGHGLEGDFNRKG+SAFS +G+R+A+ +T+VD+GTL
Sbjct: 243 PAGTMEVVLGPGWPGVLLHEAIGHGLEGDFNRKGTSAFSGRVGQRVAAPGVTVVDDGTLD 302
Query: 560 NRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRM 619
RRGS+N+DDEG PTQCTTLIE+GILKGY+QD +NARL TGN RRES+AH+P+PRM
Sbjct: 303 GRRGSLNVDDEGTPTQCTTLIEDGILKGYLQDTLNARLTGTRSTGNGRRESYAHLPMPRM 362
Query: 620 TNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVK 679
TNTYM G P EII+SVK GLYA NF GGQVDITNGKFVFSAS+AY+I+NGKIT PVK
Sbjct: 363 TNTYMRAGDRDPREIIASVKRGLYAVNFGGGQVDITNGKFVFSASEAYLIENGKITRPVK 422
Query: 680 GATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
GATLIG+GP++L +V MIGND+++D GVG CGKDGQ VPVGVGQPTLKI +TVGGT
Sbjct: 423 GATLIGNGPDVLTRVEMIGNDLQMDTGVGTCGKDGQSVPVGVGQPTLKIRDLTVGGTQ 480
>gi|270159981|ref|ZP_06188637.1| TldD protein [Legionella longbeachae D-4968]
gi|289165276|ref|YP_003455414.1| TldD protein [Legionella longbeachae NSW150]
gi|269988320|gb|EEZ94575.1| TldD protein [Legionella longbeachae D-4968]
gi|288858449|emb|CBJ12327.1| TldD protein [Legionella longbeachae NSW150]
Length = 480
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 281/477 (58%), Positives = 363/477 (76%), Gaps = 8/477 (1%)
Query: 265 ARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQG 324
A+ +LL P LDE + K+ M + +D AD YFQ + E+W LE+ +VK+G+FS+++G
Sbjct: 8 AKKVLLAPAALDETGIEKLFKTMMNHHIDDADLYFQSCQYESWYLEDSVVKSGSFSLDKG 67
Query: 325 VGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFT 384
VG+RA+SGDKT F Y DDI +++ A + RSIA + + I ++K I S Y
Sbjct: 68 VGIRAVSGDKTGFAYCDDILLPSMLRAADAARSIALTGSRPTQSI-HVKSAAI-SRYQGL 125
Query: 385 DTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLV 444
+ + ++ EKI LLE ++K AR DPRVI+V A LSG Y+V+++ G ++AD+RPLV
Sbjct: 126 NPMEGMSKHEKIALLEAIDKEARRIDPRVIQVNAALSGCYEVVMVAGMHGQMIADVRPLV 185
Query: 445 QLFVTIIVE-KNGRREIGNSGCGGRYNYNYFTDMILEKCVS---NSVNSALINLEAKPAP 500
+ V++IVE K GRRE SG GGR Y+YF + E +S +V ALINLEA+PAP
Sbjct: 186 SINVSVIVEDKQGRRESARSGGGGRVAYSYFLEK--ENALSYAREAVREALINLEARPAP 243
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG M VVLGPGWPG+LLHEA+GHGLEGDFNRKG SAFS IG+++A+ +T+VD+GTL +
Sbjct: 244 AGTMPVVLGPGWPGVLLHEAVGHGLEGDFNRKGLSAFSGRIGEQVAAPGVTVVDDGTLKD 303
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGSI IDDEG P+QCTTLI+NGIL YMQD +NA+LM M TGN RRES+AH+P+PRMT
Sbjct: 304 RRGSITIDDEGTPSQCTTLIDNGILVNYMQDKLNAKLMGMKSTGNCRRESYAHVPMPRMT 363
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYML G + PEEII SVK GLYA NF GGQVDIT+G+FVFSAS+AY+I++GKIT PVKG
Sbjct: 364 NTYMLAGSYDPEEIIRSVKRGLYAVNFGGGQVDITSGQFVFSASEAYLIEDGKITTPVKG 423
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
ATLIG+GP+++KK+SMIGND+ LD G+GVCGK+GQ VPVGVGQPTLKID++TVGGT+
Sbjct: 424 ATLIGNGPDVMKKISMIGNDLGLDRGIGVCGKEGQSVPVGVGQPTLKIDALTVGGTH 480
>gi|406943800|gb|EKD75712.1| hypothetical protein ACD_44C00046G0007 [uncultured bacterium]
Length = 480
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 280/478 (58%), Positives = 358/478 (74%), Gaps = 2/478 (0%)
Query: 261 PLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFS 320
PL +A S LL P L+E L ++L + VD D YFQ ++E+W LE+GIVK G++
Sbjct: 4 PLKLAYSNLLSPAGLNENQLQRVLHQLLGKGVDSGDLYFQSVRHESWALEDGIVKEGSYH 63
Query: 321 INQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSL 380
+QGVG+RAISG+KT F YSDDI + L A + +SIA K KI +K L
Sbjct: 64 HHQGVGIRAISGEKTGFAYSDDIQISLLEQAANAAKSIAFHGQNK-KINLTPLTLKPQKL 122
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y ++S EKI LL++++ AR DPR+ V+A+LSG +++ILI G AD+
Sbjct: 123 YISDSPLTSFTEDEKINLLKKIDHHARAADPRITHVMASLSGSHEIILILNAQGNFFADV 182
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDM-ILEKCVSNSVNSALINLEAKPA 499
RPL++L V +I EKN RE G +G GGRY Y+YF + E + +V+ AL+NL+A PA
Sbjct: 183 RPLIRLDVRVIAEKNQIRETGYAGGGGRYKYSYFLEENRWEHYTNEAVHQALLNLDAIPA 242
Query: 500 PAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLA 559
PAG + VVLGPGWPGILLHEA+GHGLEGDFNRK SSAFS +G+R+A+ T++D+GT+A
Sbjct: 243 PAGTLPVVLGPGWPGILLHEAVGHGLEGDFNRKKSSAFSGRLGQRVAAPGCTVIDDGTIA 302
Query: 560 NRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRM 619
NRRGS++IDDEG PTQ T LIENGILKGYMQD++NA+LM M TGN RRES+AHIP+PRM
Sbjct: 303 NRRGSLSIDDEGTPTQHTVLIENGILKGYMQDLLNAQLMQMQATGNGRRESYAHIPLPRM 362
Query: 620 TNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVK 679
TNTYML G + PEEII SVK G+YA NF+GGQVDIT+GKFVFSA+ AY+I++GKIT P+K
Sbjct: 363 TNTYMLPGPYDPEEIIRSVKKGIYAVNFAGGQVDITSGKFVFSANVAYLIEDGKITTPIK 422
Query: 680 GATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
GATLIG+GP++L +VSMIGND++LD G+G CGKDGQ +PVGVGQPT+KIDS+TVGGTN
Sbjct: 423 GATLIGNGPDVLTRVSMIGNDLQLDTGMGTCGKDGQSIPVGVGQPTIKIDSLTVGGTN 480
>gi|387129557|ref|YP_006292447.1| TldD protein, part of proposed TldE/TldD proteolytic complex
[Methylophaga sp. JAM7]
gi|386270846|gb|AFJ01760.1| TldD protein, part of proposed TldE/TldD proteolytic complex
[Methylophaga sp. JAM7]
Length = 480
Score = 573 bits (1477), Expect = e-160, Method: Compositional matrix adjust.
Identities = 269/476 (56%), Positives = 351/476 (73%), Gaps = 3/476 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L++ + LL P L + L + VDYAD YFQ ++ENW+LE+GI+K G F +
Sbjct: 6 LDVVTASLLTPASLQLQDAEAALAKTMRPGVDYADLYFQRNRSENWLLEDGIIKDGGFHL 65
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QGVGVRAISG+KT F YSD++ K+ L+ A + S+ +G+ K I ++ Y
Sbjct: 66 EQGVGVRAISGEKTGFAYSDNLEKSALLQAGDAASSVVK--SGQQKKISLASMVRATPYY 123
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ TD IS+++ K+ LL R + AR DPRV +V +L+GE D++ I +DG + AD+R
Sbjct: 124 AATDPISTLSADAKLDLLRRADTAAREADPRVKRVTVSLAGEEDLVFILASDGTLAADVR 183
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAP 500
PL++L V++IVE +GRRE G++G G R +Y YF D + E +V AL+NLEA AP
Sbjct: 184 PLIRLNVSVIVESDGRRERGSAGGGRRLDYQYFVADDLPESFAKEAVRQALVNLEAVDAP 243
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG M VVL GWPG+LLHEA+GHGLEGDFNR+GSSAFS IG+++AS T+VD+GTL++
Sbjct: 244 AGSMPVVLASGWPGVLLHEAVGHGLEGDFNRRGSSAFSGRIGEQVASSLCTVVDDGTLSD 303
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+ +DDEG PTQCTTLIENG L GYMQD +NARLM M TGN RRES+AH+P+PRMT
Sbjct: 304 RRGSLTVDDEGTPTQCTTLIENGRLTGYMQDKLNARLMGMPTTGNGRRESYAHLPMPRMT 363
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYML G P+EIISSVK G+YA NF GGQVDIT+GKFVFS+S+AY+I+NGK+T PVKG
Sbjct: 364 NTYMLAGPHKPDEIISSVKKGIYAVNFGGGQVDITSGKFVFSSSEAYLIENGKVTRPVKG 423
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
ATLIG+GP+++ +SM+ +D+ LD G+G CGKDGQ VPVGVGQPTLK+D +TVGGT
Sbjct: 424 ATLIGNGPDVMNCISMVADDVALDSGIGNCGKDGQSVPVGVGQPTLKVDKLTVGGT 479
>gi|406936004|gb|EKD69828.1| Peptidase U62, modulator of DNA gyrase [uncultured bacterium]
Length = 482
Score = 569 bits (1467), Expect = e-159, Method: Compositional matrix adjust.
Identities = 274/476 (57%), Positives = 359/476 (75%), Gaps = 3/476 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
I R LLEP L + L K++ + VDYAD YFQ T E+W+LE+GI+K G+F I
Sbjct: 5 FEIVRRDLLEPAGLTDTELQKVIHVLGGRTVDYADLYFQSTYAESWVLEDGIIKGGSFDI 64
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVGVRA+SG+KT F Y+DDI L+ A ++ +SI Q G +K K + LY
Sbjct: 65 DRGVGVRAMSGEKTGFAYADDIILPALMQAAEAAKSIVKQ--GADTAVKAWSKHPGHDLY 122
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + S++ +K+ L++RV++ R KD R+++V +L+GEY+ IL+ +DG + AD+R
Sbjct: 123 LPINPLHSLSETDKVSLMQRVDRYIRAKDTRIVQVNLSLAGEYETILVMASDGHLAADVR 182
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAP 500
PLV+ V++IVE+NGRRE G +G GGR++Y +F D + + ++ AL+NL+A AP
Sbjct: 183 PLVRFNVSVIVEQNGRRESGYAGGGGRFDYQHFIVDDLAFQFADEALRQALVNLDAIDAP 242
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG M VVLGPGWPG+LLHEA+GHGLEGDFNRKG SA+S +G+++AS+ TIVDNGTL N
Sbjct: 243 AGTMTVVLGPGWPGVLLHEAVGHGLEGDFNRKGISAYSGRMGQKVASELCTIVDNGTLEN 302
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+N+DDEG PTQ LIENGILK YM D NARLM ++ TGN RRES++H+P+PRMT
Sbjct: 303 RRGSLNVDDEGTPTQNNVLIENGILKNYMMDKRNARLMGVASTGNGRRESYSHLPLPRMT 362
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYML GK PEE+I+SVK GLYA NF GGQVDIT+GKFVFSAS+AY+I+NGKI PVKG
Sbjct: 363 NTYMLPGKSAPEEMIASVKKGLYAVNFGGGQVDITSGKFVFSASEAYLIENGKIGAPVKG 422
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
ATLIG+GP++L KVSM+GND+KLD G+G+CGKDGQ VPVGVGQPTL +D +TVGGT
Sbjct: 423 ATLIGNGPDVLSKVSMVGNDLKLDTGIGICGKDGQSVPVGVGQPTLLVDELTVGGT 478
>gi|290476779|ref|YP_003469690.1| hypothetical protein XBJ1_3810 [Xenorhabdus bovienii SS-2004]
gi|289176123|emb|CBJ82928.1| putative enzyme for maturation of Microcin B17 and degradation of
CcdA with winged helix domain [Xenorhabdus bovienii
SS-2004]
Length = 481
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 271/481 (56%), Positives = 361/481 (75%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L LL +L+ + L +LG + + ++DYAD YFQ + +E WILE+ I+K G+++I
Sbjct: 3 LTFVSDYLLAANNLNHQDLFSVLGQLAERRLDYADLYFQSSYHEAWILEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRAISG+KT F Y+D I+ N L + ++ RSI ++ NG ++ + + L
Sbjct: 63 DQGVGVRAISGEKTGFAYADQITLNALQQSAQAARSIVREAGNGTVRTLGAVTH---KGL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y D + S++ EKI LL RV++IAR +DPRV +V A+L+G Y+ +L+ DG + ADI
Sbjct: 120 YPAIDPLQSMSREEKIALLHRVDQIARAEDPRVQEVNASLTGVYEQMLVAATDGTLAADI 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE++G+RE G+SG G RY Y YF +++ E+ +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEEDGKREHGSSGGGARYGYEYFLQTADGEVLAEQFAREAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG+++AS+ T+VD+
Sbjct: 240 AVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQIGEQVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ RRGS+++DDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTIEGRRGSLSVDDEGVPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK PEEII+SV +GLYA NF GGQVDIT+GKFVFS S+AY+I+NGKIT
Sbjct: 360 MPRMTNTYMLAGKSTPEEIIASVDSGLYAPNFGGGQVDITSGKFVFSTSEAYLIENGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++K+SM+GND+ LD GVGVCGK+GQ VPVGVGQPTLK+D++TVGG
Sbjct: 420 KPVKGATLIGSGIEAMQKISMVGNDLALDKGVGVCGKEGQSVPVGVGQPTLKLDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|399117159|emb|CCG19973.1| putative protease, modulator of DNA gyrase [Taylorella
asinigenitalis 14/45]
Length = 488
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 285/478 (59%), Positives = 375/478 (78%), Gaps = 3/478 (0%)
Query: 261 PLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFS 320
P+ A+ ILL+ + ++ + K LG + +K +YAD YFQ+ +ENW LEEGIVKTG FS
Sbjct: 10 PIVHAKKILLDDNGITQEHISKALGVIHSHKTNYADLYFQYNSSENWSLEEGIVKTGGFS 69
Query: 321 INQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKK-IKINS 379
I+QGVGVRA++G+KTAF YSD++S + L+ ++ +SIA Q G+ K+ + K +K S
Sbjct: 70 ISQGVGVRAVAGEKTAFSYSDELSSSILLKNAETVKSIATQ--GEAKVYTSPKGLVKSES 127
Query: 380 LYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVAD 439
LY+ D I+++ EK+++L +VEK AR P + +V+A L EY+V+L+ + G + AD
Sbjct: 128 LYAPIDPINTMTSEEKLEILHKVEKYARAMSPEIKQVMAGLGAEYEVVLVVSSGGRLEAD 187
Query: 440 IRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPA 499
IRPLV+L +T+I E+NGRRE GN+G GGR+ NYFTD ++++ V +V+ ALINLEAKPA
Sbjct: 188 IRPLVRLSLTVIAERNGRRERGNAGGGGRFGLNYFTDELIKEYVKKAVDEALINLEAKPA 247
Query: 500 PAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLA 559
PAG M VVLG GWPGILLHEA+GHGLEGDFNRKG+S FS IG+R+ASK +T+VD+GT+
Sbjct: 248 PAGEMTVVLGSGWPGILLHEAVGHGLEGDFNRKGTSVFSGRIGERVASKGVTVVDDGTIK 307
Query: 560 NRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRM 619
+RRGS+NIDDEGNPTQ LIE+G+L GY+QD +NA LMNM +TGNARRES+AH+P+PRM
Sbjct: 308 DRRGSLNIDDEGNPTQRNVLIEDGVLCGYLQDTLNANLMNMPLTGNARRESYAHLPMPRM 367
Query: 620 TNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVK 679
TNTYML G+ +EII SVK G+YA NFSGGQVDIT+GKFVFSAS+AY+I++GKIT P+
Sbjct: 368 TNTYMLGGEHKHDEIIESVKKGIYAANFSGGQVDITSGKFVFSASEAYLIEDGKITSPIV 427
Query: 680 GATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
GATLIG G + + KVSMIG++M LD GVG CGKDGQ VPVGVG PT+++D ITVGGT+
Sbjct: 428 GATLIGSGLDTMNKVSMIGDNMSLDSGVGTCGKDGQSVPVGVGMPTIRVDGITVGGTH 485
>gi|288942222|ref|YP_003444462.1| peptidase U62 modulator of DNA gyrase [Allochromatium vinosum DSM
180]
gi|288897594|gb|ADC63430.1| peptidase U62 modulator of DNA gyrase [Allochromatium vinosum DSM
180]
Length = 480
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 274/483 (56%), Positives = 366/483 (75%), Gaps = 9/483 (1%)
Query: 259 IHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGN 318
I P+ IAR +L P LDE L ++LG++ VD AD YFQ+++ ++W+LE+GI+K GN
Sbjct: 2 IDPIAIARDSILAPAGLDESALDRLLGHLTSAAVDAADIYFQYSRLQSWVLEDGILKDGN 61
Query: 319 FSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKI 377
FSI QG G+RA+SG+KT F YSD++ LI A + R+IA +G+++I + +
Sbjct: 62 FSIEQGAGLRAVSGEKTGFAYSDELQLPALIEAATAARAIARGGQDGRVRIGQ---RPVA 118
Query: 378 NSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIV 437
LY + I S+ +K+ LL+RV+ AR DPRV +VIA+L D +L+ +DG +
Sbjct: 119 QRLYEPLNPIDSLPDADKVALLQRVDAEARRADPRVREVIASLVAVQDTVLVLADDGTLA 178
Query: 438 ADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVS---NSVNSALINL 494
AD+RPLV+L V++I E++GRRE G+SG G R + YF ++ ++ ++ +V AL+NL
Sbjct: 179 ADVRPLVRLNVSVIAEQDGRREQGSSGGGARADLGYF--LVEDRALAFAREAVRLALVNL 236
Query: 495 EAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVD 554
+A APAG M VVLG GWPG+LLHEAIGHGLEGDFNRKGSSAF+ +G+R+A+K +T+VD
Sbjct: 237 DAVEAPAGTMTVVLGSGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRLGQRVAAKGVTVVD 296
Query: 555 NGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHI 614
+GTL RRGS+N+DDEG PTQ T LIE+GIL+GYMQD +NARL + TGN RRES+AH+
Sbjct: 297 DGTLPGRRGSLNLDDEGTPTQNTVLIEDGILRGYMQDKLNARLTGTTPTGNGRRESYAHL 356
Query: 615 PIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKI 674
P+PRMTNTYML G+ PEEII+SV GLYA NF GGQVDIT+GKFVFSAS+AY+I+ G+I
Sbjct: 357 PMPRMTNTYMLAGERDPEEIIASVDKGLYAVNFGGGQVDITSGKFVFSASEAYLIEKGRI 416
Query: 675 TYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVG 734
T PVKGATLIG+GP++L +VS+IGND++LD GVG CGK+GQ VPVGVGQPTL+ID +TVG
Sbjct: 417 TRPVKGATLIGNGPDVLTRVSLIGNDLRLDEGVGTCGKEGQSVPVGVGQPTLRIDGLTVG 476
Query: 735 GTN 737
GT+
Sbjct: 477 GTS 479
>gi|220935435|ref|YP_002514334.1| TldD protein [Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|219996745|gb|ACL73347.1| TldD protein [Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 481
Score = 567 bits (1460), Expect = e-158, Method: Compositional matrix adjust.
Identities = 281/480 (58%), Positives = 369/480 (76%), Gaps = 8/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L IA+ +EP L E L ++LG + +D D YFQ T++E+W LE+GIVK G+++I
Sbjct: 5 LQIAKQQFMEPAGLTEGDLDRVLGGLMGPGIDGGDLYFQLTRHESWSLEDGIVKDGSYNI 64
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QGVGVRA+SGDKT F YSDDI TL+ A + R+IA ++ ++ + +SLY
Sbjct: 65 EQGVGVRALSGDKTGFAYSDDIRMPTLLEASSAARAIARAASSGTAAMR--RDQAGHSLY 122
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ D +++++ + KI LL RV+ AR +DPRV +V+ +L+G ++VI++ DG + AD+R
Sbjct: 123 APLDPLATLDEQAKIDLLHRVDAEARRQDPRVSQVMVSLNGVHEVIMVANTDGTLAADVR 182
Query: 442 PLVQLFVTIIVE-KNGRREIGNSGCGGRYNYNYFTDMILEKCVS---NSVNSALINLEAK 497
PLV+L V +IVE K+GRRE +SG GGR Y +F D E+ + +V AL+NLEA
Sbjct: 183 PLVRLNVNVIVEGKDGRREQASSGGGGRSGYEFFLDE--ERALGYAREAVRQALVNLEAV 240
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
APAG + VVLGPGWPG+LLHEA+GHGLEGDFNRKG+SAFS IG+++AS +T+VD+GT
Sbjct: 241 DAPAGTLTVVLGPGWPGVLLHEAVGHGLEGDFNRKGTSAFSGRIGQQVASPGVTVVDDGT 300
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
LA RRGS+N+DDEG PTQCTTLIENG+L+G+MQD +NARLM + TGN RRES+AH+P+P
Sbjct: 301 LAGRRGSLNVDDEGIPTQCTTLIENGVLRGFMQDRLNARLMGVPTTGNGRRESYAHLPMP 360
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNTYML G+ P EI++SVKNGLYA NF GGQVDIT+GKFVFSAS+AY+I+NG++T P
Sbjct: 361 RMTNTYMLAGEHDPGEILASVKNGLYAVNFGGGQVDITSGKFVFSASEAYLIENGRVTRP 420
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
VKGATLIG+GP +L +VSM+GND+KLD GVG CGKDGQ VPVGVGQPTLK+D +TVGGT+
Sbjct: 421 VKGATLIGNGPEVLTRVSMVGNDLKLDAGVGTCGKDGQSVPVGVGQPTLKVDGLTVGGTS 480
>gi|407716908|ref|YP_006838188.1| C69 family peptidase [Cycloclasticus sp. P1]
gi|407257244|gb|AFT67685.1| Peptidase U62, modulator of DNA gyrase [Cycloclasticus sp. P1]
Length = 480
Score = 567 bits (1460), Expect = e-158, Method: Compositional matrix adjust.
Identities = 276/476 (57%), Positives = 366/476 (76%), Gaps = 7/476 (1%)
Query: 265 ARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQG 324
A S++L+P L + ++G++ +D AD YFQ +++E+W+LE+GIVK GN++I QG
Sbjct: 8 AESLILKPVGLSINDIDNVMGSLLSTNIDQADIYFQSSRSESWVLEDGIVKDGNYNIEQG 67
Query: 325 VGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFT 384
VG+RA+SG+KT F YS++++ ++ A S ++IA S G+ I+K + SLY+
Sbjct: 68 VGLRAVSGEKTGFAYSEELTLPNMLAAANSVKAIA--SGGRSGILKATMFNDMPSLYAPI 125
Query: 385 DTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLV 444
D ++++ EK+ LL+R+++ R D R+ +V+ +L G Y+V+L+ +DG + +DIRPLV
Sbjct: 126 DPLNTMTREEKVALLKRIDQQTRQLDARIEQVVISLVGVYEVVLVATDDGSLSSDIRPLV 185
Query: 445 QLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVS---NSVNSALINLEAKPAPA 501
++ V++I+E+NGRRE G SG G R Y YF + ++ +S +V A +NLEA APA
Sbjct: 186 RMNVSVIIEENGRREQGGSGGGARQGYEYFLEE--DRAMSYAREAVRLAQVNLEAVEAPA 243
Query: 502 GIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANR 561
G M VVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFS IG+++AS T+VD+GTL R
Sbjct: 244 GTMTVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSGRIGEKVASPLCTVVDDGTLEGR 303
Query: 562 RGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTN 621
RGS+++DDEG T CTTLIENG+LKGYM D MNARLM + TGN RRES+AH+P+PRMTN
Sbjct: 304 RGSLSVDDEGTKTACTTLIENGVLKGYMHDKMNARLMGHAATGNGRRESYAHLPMPRMTN 363
Query: 622 TYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGA 681
TYML GK P EI+SSVKNGLYA NF+GGQVDIT+GKFVFSAS+AY+I+NGKIT PVKGA
Sbjct: 364 TYMLPGKSEPAEIVSSVKNGLYAVNFAGGQVDITSGKFVFSASEAYLIENGKITQPVKGA 423
Query: 682 TLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
TLIG+GP++L KVSM+GND+KLD GVG CGK+GQ VPVGVGQPTLKID +TVGGT+
Sbjct: 424 TLIGNGPDVLNKVSMVGNDLKLDQGVGTCGKEGQSVPVGVGQPTLKIDGLTVGGTH 479
>gi|350553239|ref|ZP_08922421.1| peptidase U62 modulator of DNA gyrase [Thiorhodospira sibirica ATCC
700588]
gi|349791412|gb|EGZ45297.1| peptidase U62 modulator of DNA gyrase [Thiorhodospira sibirica ATCC
700588]
Length = 481
Score = 567 bits (1460), Expect = e-158, Method: Compositional matrix adjust.
Identities = 267/480 (55%), Positives = 365/480 (76%), Gaps = 5/480 (1%)
Query: 260 HPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNF 319
HPL+ AR LEP L EK L + LG++ + +D D YFQ ++E+W LE+ +VK ++
Sbjct: 3 HPLDFARQCFLEPVGLAEKDLEQTLGSLLGHGIDRGDIYFQLQRSESWSLEDSLVKDASY 62
Query: 320 SINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINS 379
+I++GVG+RAISG+KT F Y+DDIS L A K+ R+IA Q G+ + ++ +K +
Sbjct: 63 NIDRGVGIRAISGEKTGFAYTDDISLPALHTATKAARAIAKQ--GQDRQLQIPRKQNGHH 120
Query: 380 LYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVAD 439
+Y+ D + S+ ++KI LL++++ AR DPR+ +V+ +++G ++VI++ +DG + D
Sbjct: 121 IYAPLDPLESLCEQDKIDLLQKLDSEARRLDPRITQVMVSMAGVHEVIMVANSDGTLAGD 180
Query: 440 IRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF--TDMILEKCVSNSVNSALINLEAK 497
IRPLV+L V +I E+ RRE G++G G R Y +F D L V +V AL+NLEA
Sbjct: 181 IRPLVRLNVHVIAEQGTRREQGSAGGGARTGYGFFIEEDRAL-GYVREAVRQALLNLEAV 239
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
APAG M VVLGPGWPG+LLHEA+GHGLEGDFNRKG+SAFS +G+++A+K +T+VD+GT
Sbjct: 240 DAPAGSMTVVLGPGWPGVLLHEAVGHGLEGDFNRKGTSAFSQRMGQQVAAKGVTVVDDGT 299
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
L+ RRGS+NIDDEG TQ T LIE+GIL+GYMQD +NA LM ++ TGN RRES+AH+P+P
Sbjct: 300 LSGRRGSLNIDDEGTLTQRTVLIEDGILRGYMQDRLNAGLMGVAATGNGRRESYAHLPLP 359
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNTYML G+ PE+I++SVK GLYA NF GGQVDIT+GKFVFSAS+AY+I++GKIT P
Sbjct: 360 RMTNTYMLAGEEPPEDILASVKRGLYAVNFGGGQVDITSGKFVFSASEAYLIEDGKITRP 419
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
VKGATLIG+GP +++++S IGND++LD GVG CGK+GQ +PVGVGQPTL+ID ITVGGT
Sbjct: 420 VKGATLIGNGPEVMQRISRIGNDLQLDEGVGTCGKEGQSLPVGVGQPTLRIDGITVGGTQ 479
>gi|357417914|ref|YP_004930934.1| peptidase U62 modulator of DNA gyrase [Pseudoxanthomonas spadix
BD-a59]
gi|355335492|gb|AER56893.1| peptidase U62 modulator of DNA gyrase [Pseudoxanthomonas spadix
BD-a59]
Length = 481
Score = 566 bits (1459), Expect = e-158, Method: Compositional matrix adjust.
Identities = 269/476 (56%), Positives = 355/476 (74%), Gaps = 3/476 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L +A+S LL P LD+ L + G + +D+ D YFQ + E+W +E+GIVK G SI
Sbjct: 6 LALAQSRLLVPAGLDQTGLERAFGALLGPGIDFGDLYFQHARRESWTVEDGIVKDGAHSI 65
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QGVGVRAISG+KT F YSDDI+ L++A S R+IA +G + + + + +LY
Sbjct: 66 EQGVGVRAISGEKTGFAYSDDINAAALLSAAGSARAIAR--DGASHAARTLVRGQGRALY 123
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ D + +++ +K+ L V+K R DPRV +V +LSG D +L+ R+DG++ +D+R
Sbjct: 124 APEDPVDAMDNDDKVAALRAVDKFLRAADPRVQQVTVSLSGGVDTVLVARSDGVLASDVR 183
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMIL-EKCVSNSVNSALINLEAKPAP 500
PLV+L + +IVE+NGRRE G +G GGRY+Y E+ ++ AL+NLEA AP
Sbjct: 184 PLVRLNIQVIVEQNGRRESGYAGYGGRYSYAELLGTGRPEEFAREALRQALVNLEAVDAP 243
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG+M VVL GWPG+LLHEA+GHGLEGDFNRKG+S +++ IG+R+A+K +TIVD+GTL
Sbjct: 244 AGVMPVVLASGWPGVLLHEAVGHGLEGDFNRKGTSVYADRIGQRVAAKGVTIVDDGTLEG 303
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+N+DDEG TQCTTLIE+G+L GYMQD +NARLM M+ TGN RRESFAH+P+PRMT
Sbjct: 304 RRGSLNVDDEGQRTQCTTLIEDGVLVGYMQDSLNARLMGMAPTGNGRRESFAHLPMPRMT 363
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYML G+ P+E+I SVK GLYA NF GGQVDIT+GK+VFSA++AY+I++GK+T PVKG
Sbjct: 364 NTYMLAGQHDPQEMIRSVKKGLYAVNFGGGQVDITSGKYVFSATEAYLIEDGKVTAPVKG 423
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
ATLIG+GP ++KV MIGND+ LD GVGVCGKDGQ VPVGVGQP+L ID +TVGGT
Sbjct: 424 ATLIGNGPETMQKVRMIGNDLALDAGVGVCGKDGQSVPVGVGQPSLLIDGLTVGGT 479
>gi|114319573|ref|YP_741256.1| microcin-processing peptidase 2 [Alkalilimnicola ehrlichii MLHE-1]
gi|114225967|gb|ABI55766.1| microcin-processing peptidase 2 [Alkalilimnicola ehrlichii MLHE-1]
Length = 483
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 267/476 (56%), Positives = 356/476 (74%), Gaps = 3/476 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L+IAR +L P L+E+ L + + VD AD YFQ ++E W++E+G V+ G I
Sbjct: 8 LDIARQRILAPAGLEEQHLEQAFARLMGPGVDAADIYFQSARSEGWVMEDGRVREGTRGI 67
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QGVGVRAISG+++ F YSD+I L+ A S R+IA +G+ ++ + + ++LY
Sbjct: 68 DQGVGVRAISGEQSGFAYSDEIVLPALMEASGSARAIAR--SGQSGRLQAWHRGEGHALY 125
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + ++ +K+ LL+ V+ AR +DPRV +VIA L G ++ +L+ DG + AD+R
Sbjct: 126 PTDNPLDGLSADDKVALLKAVDAEARAQDPRVEQVIATLGGVHETMLVACADGTLAADVR 185
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILE-KCVSNSVNSALINLEAKPAP 500
PLV+ V+++V + RRE G G GGR +Y++F D +V AL+NLEA+ AP
Sbjct: 186 PLVRFNVSVLVREGDRRENGMCGGGGRVSYSFFLDQDRALGYAREAVRQALVNLEAEEAP 245
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG M VVLGPGWPG+LLHEA+GHGLEGDFNRKG+SAF+ +G+R+AS T+VD+GTLAN
Sbjct: 246 AGSMPVVLGPGWPGVLLHEAVGHGLEGDFNRKGTSAFAGRMGERVASPLCTVVDDGTLAN 305
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+N+DDEG PT+CTTLIE G+LKG+MQD +NARLM + TGN RRESFAH+P+PRMT
Sbjct: 306 RRGSLNVDDEGTPTRCTTLIEKGVLKGFMQDKLNARLMGTASTGNCRRESFAHLPMPRMT 365
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYML G PEEII SV +GLYA NF GGQVDIT+GKFVFSAS+AY+I+ G+IT PVKG
Sbjct: 366 NTYMLPGPHDPEEIIRSVDHGLYAVNFGGGQVDITSGKFVFSASEAYLIEKGRITTPVKG 425
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
ATLIG+GP++L +VSM+GND+KLD G+GVCGK+GQ VPVGVGQPTLK+D++TVGGT
Sbjct: 426 ATLIGNGPDVLTRVSMVGNDLKLDGGIGVCGKEGQSVPVGVGQPTLKVDALTVGGT 481
>gi|348589920|ref|YP_004874382.1| TldD protein [Taylorella asinigenitalis MCE3]
gi|347973824|gb|AEP36359.1| TldD protein [Taylorella asinigenitalis MCE3]
Length = 488
Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust.
Identities = 284/478 (59%), Positives = 373/478 (78%), Gaps = 3/478 (0%)
Query: 261 PLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFS 320
P+ A+ ILL+ + + + K LG + +K +YAD YFQ+ +ENW LEEGIVKTG FS
Sbjct: 10 PIVHAKKILLDDNGITIEHIAKALGVIHSHKTNYADLYFQYNSSENWSLEEGIVKTGGFS 69
Query: 321 INQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKK-IKINS 379
I+QGVGVRA++G+KTAF YSD++S + L+ ++ +SIA Q G+ K+ + K +K S
Sbjct: 70 ISQGVGVRAVAGEKTAFSYSDELSSSILLKNAETVKSIATQ--GEAKVYTSPKGLVKSES 127
Query: 380 LYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVAD 439
LY+ D I+++ EK+++L +VEK AR P + +V+A L EY+V+L+ + G + AD
Sbjct: 128 LYAPIDPINTMTSEEKLEILHKVEKYARAMSPEIKQVMAGLGAEYEVVLVVSSGGRLEAD 187
Query: 440 IRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPA 499
IRPLV+L +T+I E+NGRRE GN+G GGR+ NYFT ++++ V +V+ ALINLEAKPA
Sbjct: 188 IRPLVRLSLTVIAERNGRRERGNAGGGGRFGLNYFTVELIKEYVKKAVDEALINLEAKPA 247
Query: 500 PAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLA 559
PAG M VVLG GWPGILLHEA+GHGLEGDFNRKG+S FS IG+R+ASK +T++D+GT+
Sbjct: 248 PAGEMTVVLGSGWPGILLHEAVGHGLEGDFNRKGTSVFSGRIGERVASKGVTVIDDGTIK 307
Query: 560 NRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRM 619
+RRGS+NIDDEGNPTQ LIE+G+L GY+QD +NA LMNM +TGNARRES+AH+P+PRM
Sbjct: 308 DRRGSLNIDDEGNPTQRNVLIEDGVLCGYLQDTLNANLMNMPLTGNARRESYAHLPMPRM 367
Query: 620 TNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVK 679
TNTYML G+ EEII SVK G+YA NFSGGQVDIT+GKFVFSAS+AY+I++GKIT P+
Sbjct: 368 TNTYMLGGEHKHEEIIESVKKGIYAANFSGGQVDITSGKFVFSASEAYLIEDGKITSPIV 427
Query: 680 GATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
GATLIG G + + KVSMIG++M LD GVG CGKDGQ VPVGVG PT+++D ITVGGT+
Sbjct: 428 GATLIGSGLDTMNKVSMIGDNMSLDSGVGTCGKDGQSVPVGVGMPTIRVDGITVGGTH 485
>gi|292490680|ref|YP_003526119.1| peptidase U62 modulator of DNA gyrase [Nitrosococcus halophilus
Nc4]
gi|291579275|gb|ADE13732.1| peptidase U62 modulator of DNA gyrase [Nitrosococcus halophilus
Nc4]
Length = 479
Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust.
Identities = 262/477 (54%), Positives = 358/477 (75%), Gaps = 9/477 (1%)
Query: 265 ARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQG 324
A+++LL P L E L ++LG + VD AD YFQ ++ E+W+LE+G+VK G+ S +QG
Sbjct: 7 AKALLLAPAGLSETDLERVLGQLMSRHVDSADLYFQLSRQESWVLEDGVVKEGSHSRDQG 66
Query: 325 VGVRAISGDKTAFFYSDDIS-KNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSF 383
VGVRAISG+KT F YSD++ A + + + G ++ + + K LY+
Sbjct: 67 VGVRAISGEKTGFAYSDEVLLPALTQAAAAARAIAHHGAQGSLQAWRAQPERK---LYAS 123
Query: 384 TDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPL 443
D + +++ +K+ LL++V++ AR +DPRV +V+ +L G DV+LI NDG + ADIRPL
Sbjct: 124 IDPLDTLSTEDKVSLLQQVDQEARRQDPRVKQVVISLLGTQDVVLIAANDGTLAADIRPL 183
Query: 444 VQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVS---NSVNSALINLEAKPAP 500
V+L V++IVE++GRRE G++G G R Y+YF + E+ + + ALINLEAK AP
Sbjct: 184 VRLNVSVIVEQSGRREQGSAGGGARLGYDYFLEQ--ERALGYAREATRQALINLEAKEAP 241
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS ++ IG+++ASK T+VD+GTLAN
Sbjct: 242 AGTMTVVLGAGWPGVLLHEAVGHGLEGDFNRKGSSTYAGRIGEKVASKYCTVVDDGTLAN 301
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+ +DDEG P CT LIENG+L+GYMQD +NARL + TGN RR+S+AH+P+PRMT
Sbjct: 302 RRGSLTVDDEGTPAHCTLLIENGVLRGYMQDKLNARLSSAQPTGNGRRQSYAHLPMPRMT 361
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTY+L G+ P EII+SV+ GLYA NF GGQVDIT+GKFVF+ S+AY+I+NG++T PVKG
Sbjct: 362 NTYLLPGQHDPGEIIASVEKGLYAVNFGGGQVDITSGKFVFTTSEAYLIENGRVTCPVKG 421
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
ATLIG+GP ++ +V+M+GND++LDPGVG CGK+GQ VPVGVGQPTL+ID +T+GGT+
Sbjct: 422 ATLIGNGPEVMAQVAMVGNDLRLDPGVGTCGKEGQRVPVGVGQPTLRIDGLTIGGTS 478
>gi|392952913|ref|ZP_10318467.1| tldD protein [Hydrocarboniphaga effusa AP103]
gi|391858428|gb|EIT68957.1| tldD protein [Hydrocarboniphaga effusa AP103]
Length = 480
Score = 563 bits (1450), Expect = e-157, Method: Compositional matrix adjust.
Identities = 275/477 (57%), Positives = 359/477 (75%), Gaps = 3/477 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L +ARS LL+P +LDE+ L ++L + K VD AD YFQF+K+E+W LEEGIVK+G+ S+
Sbjct: 5 LAVARSTLLDPAELDERRLTRVLDGLMKPGVDAADLYFQFSKSEHWSLEEGIVKSGSHSV 64
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QGVGVRA++GDK Y++++ + L +A + R+I + G +++ ++ + K +LY
Sbjct: 65 EQGVGVRAVAGDKQGLAYTEELRLDALEDAATAARAIVD--GGDQRVVGSLTESKGLTLY 122
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + ++ EK+ LL R + AR DPRV +V+A+L+ Y+V+++ DG + AD+R
Sbjct: 123 PPINPLDTLPTPEKLALLRRADAAARAADPRVQQVMASLAMNYEVVVMASTDGRLAADVR 182
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMIL-EKCVSNSVNSALINLEAKPAP 500
PL+++ VT+IVE GRRE + G GGR +YF L E+ +V A++ L++ PAP
Sbjct: 183 PLIRMDVTVIVEDKGRREQAHVGGGGRQALDYFAASQLPEEYAREAVRQAIVLLDSVPAP 242
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG M VVLGPGWPG+LLHEA+GHGLEGDFNRKGSSA+S IG+++AS TIVD+GTLA
Sbjct: 243 AGSMPVVLGPGWPGVLLHEAVGHGLEGDFNRKGSSAYSGRIGEKVASDLCTIVDDGTLAG 302
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+N+DDEG PT+CTTLIENGILKGY+QD +NARLM M TGN RRESFA + +PRMT
Sbjct: 303 RRGSLNLDDEGTPTRCTTLIENGILKGYLQDTLNARLMGMQPTGNGRRESFASLVMPRMT 362
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYML G PEEII SV GLYA NF GGQVDIT+G FVFSAS+AY+I+NG+IT PVKG
Sbjct: 363 NTYMLAGPHDPEEIIRSVPRGLYAVNFGGGQVDITSGNFVFSASEAYLIENGRITRPVKG 422
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
ATLIG+GP + VSM+GND+KLD GVG+CGK+GQ VPVGVGQPTLKID ITVGGT
Sbjct: 423 ATLIGNGPEAMGAVSMVGNDLKLDGGVGICGKEGQSVPVGVGQPTLKIDGITVGGTQ 479
>gi|389759297|ref|ZP_10191754.1| putative Zn-dependent protease-like protein [Rhodanobacter sp. 115]
gi|388430567|gb|EIL87725.1| putative Zn-dependent protease-like protein [Rhodanobacter sp. 115]
Length = 479
Score = 563 bits (1450), Expect = e-157, Method: Compositional matrix adjust.
Identities = 283/476 (59%), Positives = 351/476 (73%), Gaps = 10/476 (2%)
Query: 265 ARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQG 324
A + LL P L L ++ + +D AD YFQ +++E+W+LEEGIVK G+ SI QG
Sbjct: 8 AENRLLAPGGLATGDLDRVFSQLMGPSIDAADLYFQHSRSESWLLEEGIVKDGSHSIEQG 67
Query: 325 VGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINS---LY 381
VGVRAISG+KT F YSD+I L++A ++ R+IA +G K + +N LY
Sbjct: 68 VGVRAISGEKTGFAYSDEIVLPQLLDASRAARAIAQDGHGAGK------PLALNGARQLY 121
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
D + S+ +KI LL V+ AR +DPRV +VI +L+ D +LI +DG + AD+R
Sbjct: 122 PAIDPVESLPNPDKIALLREVDAYARSRDPRVQQVIVSLAATMDTVLIAASDGTLAADVR 181
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSN-SVNSALINLEAKPAP 500
PLV+L V +I E NGRRE G++G GGRY Y + ++ +V AL+NLEA AP
Sbjct: 182 PLVRLSVQVIAEANGRREQGHAGGGGRYGYRELIENGRAMAFADEAVRQALVNLEAVDAP 241
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAF+ +G+R+A+ +T+VD+GTL
Sbjct: 242 AGQMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRMGQRVAAPGVTVVDDGTLQG 301
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+++DDEG PT+CTTLIE+GIL GYMQD +NARLM M+ TGN RRESFA +P+PRMT
Sbjct: 302 RRGSLSVDDEGTPTECTTLIEDGILTGYMQDKLNARLMGMAPTGNGRRESFAQLPMPRMT 361
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYML GK PEEII SVK GLYA NF GGQVDITNGKF FSAS+AY+I++G+IT PVKG
Sbjct: 362 NTYMLGGKADPEEIIRSVKKGLYAPNFGGGQVDITNGKFTFSASEAYLIEDGRITRPVKG 421
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
ATLIG GP +L +VSMIGNDMKLD GVGVCGKDGQ VPVGVGQPTLKID +TVGGT
Sbjct: 422 ATLIGSGPEVLNRVSMIGNDMKLDDGVGVCGKDGQSVPVGVGQPTLKIDLMTVGGT 477
>gi|319787814|ref|YP_004147289.1| peptidase U62 modulator of DNA gyrase [Pseudoxanthomonas suwonensis
11-1]
gi|317466326|gb|ADV28058.1| peptidase U62 modulator of DNA gyrase [Pseudoxanthomonas suwonensis
11-1]
Length = 481
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 269/476 (56%), Positives = 355/476 (74%), Gaps = 3/476 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L++A+S LL+P LD L G + +D+ D YFQ ++ E+W +E+GIVK G SI
Sbjct: 6 LSLAQSRLLQPGGLDPAALDHAFGTLLGPGIDFGDLYFQHSRRESWSVEDGIVKDGAHSI 65
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QGVGVRAISG+KT F YSDDI+ L A S R+IA +G+ + + + + LY
Sbjct: 66 EQGVGVRAISGEKTGFAYSDDINAEALRLAAGSARAIAR--DGRAHAPRQLVRSGGHDLY 123
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
D + + +K++LL ++++ R DPRV +V A+LS D +L+ R+DG++ AD+R
Sbjct: 124 PAVDPVDGMRNEDKVELLRSLDRLLRAADPRVQQVSASLSAGVDTVLVARSDGVLAADVR 183
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYN-YFTDMILEKCVSNSVNSALINLEAKPAP 500
PLV+L V +IVE NGRRE G +G GGRY+Y F+ E+ ++ AL+NL+A AP
Sbjct: 184 PLVRLNVQVIVEHNGRRESGYAGGGGRYSYEELFSGGRPERLAREALRQALVNLDAIDAP 243
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S ++ IG+R+A+ +TIVD+GTLA
Sbjct: 244 AGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRKGTSTYAGRIGQRVAAPGVTIVDDGTLAG 303
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+NIDDEG PT+CTTLIE+G+L GYMQD +NARLM M+ TGN RRESFAH+ +PRMT
Sbjct: 304 RRGSLNIDDEGEPTRCTTLIEDGVLVGYMQDSLNARLMGMAPTGNGRRESFAHLVMPRMT 363
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYML G+ P+E+I+SVK GLYA NF GGQVDIT+GK+VFSA++AY+I++GKIT PVKG
Sbjct: 364 NTYMLAGQHDPQEMIASVKKGLYAVNFGGGQVDITSGKYVFSATEAYLIEDGKITAPVKG 423
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
ATLIG+GP ++KV M+G+D+ LD GVG+CGKDGQ VPVGVGQP+L ID +TVGGT
Sbjct: 424 ATLIGNGPETMQKVRMVGHDLALDEGVGICGKDGQSVPVGVGQPSLLIDGLTVGGT 479
>gi|21243494|ref|NP_643076.1| TldD protein [Xanthomonas axonopodis pv. citri str. 306]
gi|381171849|ref|ZP_09880988.1| modulator of DNA gyrase family protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|390993165|ref|ZP_10263357.1| modulator of DNA gyrase family protein [Xanthomonas axonopodis pv.
punicae str. LMG 859]
gi|21109054|gb|AAM37612.1| TldD protein [Xanthomonas axonopodis pv. citri str. 306]
gi|372552099|emb|CCF70332.1| modulator of DNA gyrase family protein [Xanthomonas axonopodis pv.
punicae str. LMG 859]
gi|380687678|emb|CCG37475.1| modulator of DNA gyrase family protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
Length = 481
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 273/477 (57%), Positives = 355/477 (74%), Gaps = 3/477 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L +A + LL P LD L + G + +D+ D YFQ ++ E+W +E+GIVK G SI
Sbjct: 6 LTLAETRLLLPSGLDAGHLDRTFGALLGPGIDFGDLYFQHSRRESWSVEDGIVKDGAHSI 65
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QGVGVRAI+G+KT F YSDDI ++ L+ A +S R+I+ + G + +++ + +LY
Sbjct: 66 EQGVGVRAIAGEKTGFAYSDDIHRDALLEAAQSARAISRE--GGAQSTRSLVRGSGRALY 123
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
TD I ++ K+ LL R+++ R DPRV +V+ +LSG D +LI R+DG++ AD+R
Sbjct: 124 PATDPIDDMDSATKVDLLRRIDQFLRAADPRVKQVMVSLSGGVDTVLIARSDGVLAADVR 183
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYN-YNYFTDMILEKCVSNSVNSALINLEAKPAP 500
PLV+L V +IVE+ GRRE G SG GGRY + F D E ++ AL+NL+A PAP
Sbjct: 184 PLVRLNVQVIVEQGGRRESGYSGGGGRYGYADLFADGRPEGFAREALRQALVNLDAIPAP 243
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG+M VVLGPGWPG+LLHEA+GHGLEGDFNRKG+S ++ IG+R+AS +TIVD+GTL
Sbjct: 244 AGVMPVVLGPGWPGVLLHEAVGHGLEGDFNRKGTSVYAGRIGERVASPGVTIVDDGTLDG 303
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+NIDDEG P+QCTTLIE+G+L GYMQD NARLM ++ TGN RRESFAH+ +PRMT
Sbjct: 304 RRGSLNIDDEGTPSQCTTLIEDGVLVGYMQDSHNARLMGVAPTGNGRRESFAHLTMPRMT 363
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYM G+ PEE+I SVK G+YA NF GGQVDIT+GK+VFSA++AY+I++GK+T PVKG
Sbjct: 364 NTYMRAGQHDPEEMIRSVKKGIYAVNFGGGQVDITSGKYVFSATEAYLIEDGKVTAPVKG 423
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
ATLIG+GP ++KV MIGND+ LD GVGVCGKDGQ VPVGVGQP+L ID ITVGGT
Sbjct: 424 ATLIGNGPETMQKVRMIGNDLALDEGVGVCGKDGQSVPVGVGQPSLLIDGITVGGTQ 480
>gi|58582928|ref|YP_201944.1| hypothetical protein XOO3305 [Xanthomonas oryzae pv. oryzae KACC
10331]
gi|84624784|ref|YP_452156.1| TldD protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|58427522|gb|AAW76559.1| TldD protein [Xanthomonas oryzae pv. oryzae KACC 10331]
gi|84368724|dbj|BAE69882.1| TldD protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 481
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 270/477 (56%), Positives = 354/477 (74%), Gaps = 3/477 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L +A + LL P LD L + G + +D+ D YFQ ++ E+W +E+GIVK G SI
Sbjct: 6 LTLAETRLLLPSGLDAGHLDRTFGALLGPGIDFGDLYFQHSRRESWSVEDGIVKDGTHSI 65
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QGVGVRAI+G+KT F YSDDI ++ L+ A S R+I+ + G + +++ + +LY
Sbjct: 66 EQGVGVRAIAGEKTGFAYSDDIHRDALLEAAHSARAISRE--GGAQSTRSLVRGSGRALY 123
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
TD + ++ K+ LL R+++ R DPRV +V+ +LSG D +LI R+DG++ AD+R
Sbjct: 124 PATDPVDDMDSATKVDLLRRIDQFLRAADPRVKQVMVSLSGGVDTVLIARSDGVLAADVR 183
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYN-YNYFTDMILEKCVSNSVNSALINLEAKPAP 500
PLV+L V +IVE+ GRRE G SG GGRY F D E ++ AL+NL+A PAP
Sbjct: 184 PLVRLNVQVIVEQGGRRESGYSGGGGRYGYAELFADGRPEGFAREALRQALVNLDAIPAP 243
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG+M VVLGPGWPG+LLHEA+GHGLEGDFNRKG+S ++ +G+R+AS +TIVD+GTL
Sbjct: 244 AGVMPVVLGPGWPGVLLHEAVGHGLEGDFNRKGTSVYAGRMGERVASPGVTIVDDGTLDG 303
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+NIDDEG P+QCTTLIE+G+L GYMQD NARLM ++ TGN RRESFAH+ +PRMT
Sbjct: 304 RRGSLNIDDEGTPSQCTTLIEDGVLVGYMQDTHNARLMGVAPTGNGRRESFAHLTMPRMT 363
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYM G+ HPEE+I +VK G+YA NF GGQVDIT+GK+VFSA++AY+I++G++T PVKG
Sbjct: 364 NTYMRAGQHHPEEMIRAVKKGIYAVNFGGGQVDITSGKYVFSATEAYLIEDGQVTAPVKG 423
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
ATLIG+GP ++KV MIGND+ LD GVGVCGKDGQ VPVGVGQP+L ID ITVGGT
Sbjct: 424 ATLIGNGPETMQKVRMIGNDLALDEGVGVCGKDGQSVPVGVGQPSLLIDGITVGGTQ 480
>gi|418516412|ref|ZP_13082586.1| TldD protein [Xanthomonas axonopodis pv. malvacearum str. GSPB1386]
gi|418519719|ref|ZP_13085771.1| TldD protein [Xanthomonas axonopodis pv. malvacearum str. GSPB2388]
gi|410705163|gb|EKQ63642.1| TldD protein [Xanthomonas axonopodis pv. malvacearum str. GSPB2388]
gi|410706951|gb|EKQ65407.1| TldD protein [Xanthomonas axonopodis pv. malvacearum str. GSPB1386]
Length = 481
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 273/477 (57%), Positives = 354/477 (74%), Gaps = 3/477 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L +A + LL P LD L + G + +D+ D YFQ ++ E+W +E+GIVK G SI
Sbjct: 6 LTLAETRLLLPSGLDAGHLDRTFGALLGPGIDFGDLYFQHSRRESWSVEDGIVKDGAHSI 65
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QGVGVRAI+G+KT F YSDDI ++ L+ A +S R+I+ + G + +++ + +LY
Sbjct: 66 EQGVGVRAIAGEKTGFAYSDDIHRDALLEAAQSARAISRE--GGAQSTRSLVRGSGRALY 123
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
TD I ++ K+ LL R+++ R DPRV +V+ +LSG D +LI R+DG++ AD+R
Sbjct: 124 PATDPIDDMDSATKVDLLRRIDQFLRAADPRVKQVMVSLSGGVDTVLIARSDGVLAADVR 183
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYN-YNYFTDMILEKCVSNSVNSALINLEAKPAP 500
PLV+L V +IVE+ GRRE G SG GGRY + F D E ++ AL+NL+A PAP
Sbjct: 184 PLVRLNVQVIVEQGGRRESGYSGGGGRYGYADLFADGRPEGFAREALRQALVNLDAIPAP 243
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG+M VVLGPGWPG+LLHEA+GHGLEGDFNRKG+S ++ IG+R+AS +TIVD+GTL
Sbjct: 244 AGVMPVVLGPGWPGVLLHEAVGHGLEGDFNRKGTSVYAGRIGERVASPGVTIVDDGTLDG 303
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+NIDDEG P+QCTTLIE+G+L GYMQD NARLM + TGN RRESFAH+ +PRMT
Sbjct: 304 RRGSLNIDDEGTPSQCTTLIEDGVLVGYMQDSHNARLMGVGPTGNGRRESFAHLTMPRMT 363
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYM G+ PEE+I SVK G+YA NF GGQVDIT+GK+VFSA++AY+I++GK+T PVKG
Sbjct: 364 NTYMRAGQHDPEEMIRSVKKGIYAVNFGGGQVDITSGKYVFSATEAYLIEDGKVTAPVKG 423
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
ATLIG+GP ++KV MIGND+ LD GVGVCGKDGQ VPVGVGQP+L ID ITVGGT
Sbjct: 424 ATLIGNGPETMQKVRMIGNDLALDEGVGVCGKDGQSVPVGVGQPSLLIDGITVGGTQ 480
>gi|325920746|ref|ZP_08182652.1| microcin-processing peptidase 2 [Xanthomonas gardneri ATCC 19865]
gi|325548798|gb|EGD19746.1| microcin-processing peptidase 2 [Xanthomonas gardneri ATCC 19865]
Length = 481
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 272/477 (57%), Positives = 353/477 (74%), Gaps = 3/477 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L +A + LL P LD L + G + +D+ D YFQ ++ E+W +E+GIVK G SI
Sbjct: 6 LTLAETRLLLPSGLDTGHLDRTFGALLGPGIDFGDLYFQHSRRESWSVEDGIVKDGAHSI 65
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QGVGVRAI+G+KT F YSDDI + L+ A +S R+I+ +G + + + + +LY
Sbjct: 66 EQGVGVRAIAGEKTGFAYSDDIQREALLEAAQSARAISR--DGGAQSTRTLVRGSGRALY 123
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
TD I ++ K++LL R+++ R DPRV +V+ +LSG D +LI R+DG++ AD+R
Sbjct: 124 PATDPIDDMDSATKVELLRRIDQYVRAADPRVKQVMVSLSGGVDTVLIARSDGVLAADVR 183
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYN-YNYFTDMILEKCVSNSVNSALINLEAKPAP 500
PLV++ V +IVE GRRE G SG GGRY F D E ++ AL+NL+A PAP
Sbjct: 184 PLVRMNVQVIVEHGGRRESGYSGGGGRYGYAELFADGRPEGFAREALRQALVNLDAIPAP 243
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG+M+VVLGPGWPG+LLHEA+GHGLEGDFNRKG+S ++ IG+R+AS +TIVD+GTL
Sbjct: 244 AGVMQVVLGPGWPGVLLHEAVGHGLEGDFNRKGTSVYAGRIGERVASPGVTIVDDGTLDG 303
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+NIDDEG PTQCTTLIE+G+L GYMQD NARLM ++ TGN RRESFAH+ +PRMT
Sbjct: 304 RRGSLNIDDEGTPTQCTTLIEDGVLVGYMQDTHNARLMGVAPTGNGRRESFAHLTMPRMT 363
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYM G+ P+E+I SVK G+YA NF GGQVDIT+GK+VFSA++AY+I++GK+T PVKG
Sbjct: 364 NTYMRAGQHDPQEMIRSVKKGIYAVNFGGGQVDITSGKYVFSATEAYLIEDGKVTAPVKG 423
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
ATLIG+GP ++KV MIGND+ LD GVGVCGKDGQ VPVGVGQP+L ID ITVGGT
Sbjct: 424 ATLIGNGPETMQKVRMIGNDLALDEGVGVCGKDGQSVPVGVGQPSLLIDGITVGGTQ 480
>gi|384418657|ref|YP_005628017.1| protein TldD [Xanthomonas oryzae pv. oryzicola BLS256]
gi|353461570|gb|AEQ95849.1| TldD [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 481
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 270/477 (56%), Positives = 354/477 (74%), Gaps = 3/477 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L +A + LL P LD L + G + +D+ D YFQ ++ E+W +E+GIVK G SI
Sbjct: 6 LTLAETRLLLPSGLDAGHLDRTFGALLGPGIDFGDLYFQHSRRESWSVEDGIVKDGTHSI 65
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QGVGVRAI+G+KT F YSDDI ++ L+ A S R+I+ + G + +++ + +LY
Sbjct: 66 EQGVGVRAIAGEKTGFAYSDDIHRDALLEAAHSARAISRE--GGAQSTRSLVRGSGRALY 123
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
TD + ++ K+ LL R+++ R DPRV +V+ +LSG D +LI R+DG++ AD+R
Sbjct: 124 PATDPVDDMDSATKVDLLRRIDQFLRAADPRVKQVMVSLSGGVDTVLIARSDGVLAADVR 183
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYN-YNYFTDMILEKCVSNSVNSALINLEAKPAP 500
PLV+L V +IVE+ GRRE G SG GGRY F D E ++ AL+NL+A PAP
Sbjct: 184 PLVRLNVQVIVEQGGRRESGYSGGGGRYGYAKLFADGRPEGVAREALRQALVNLDAIPAP 243
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG+M VVLGPGWPG+LLHEA+GHGLEGDFNRKG+S ++ +G+R+AS +TIVD+GTL
Sbjct: 244 AGVMPVVLGPGWPGVLLHEAVGHGLEGDFNRKGTSVYAGRMGERVASPGVTIVDDGTLDG 303
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+NIDDEG P+QCTTLIE+G+L GYMQD NARLM ++ TGN RRESFAH+ +PRMT
Sbjct: 304 RRGSLNIDDEGTPSQCTTLIEDGVLVGYMQDTHNARLMGVAPTGNGRRESFAHLTMPRMT 363
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYM G+ HPEE+I +VK G+YA NF GGQVDIT+GK+VFSA++AY+I++G++T PVKG
Sbjct: 364 NTYMRAGQHHPEEMILAVKKGIYAVNFGGGQVDITSGKYVFSATEAYLIEDGQVTAPVKG 423
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
ATLIG+GP ++KV MIGND+ LD GVGVCGKDGQ VPVGVGQP+L ID ITVGGT
Sbjct: 424 ATLIGNGPETMQKVRMIGNDLALDEGVGVCGKDGQSVPVGVGQPSLLIDGITVGGTQ 480
>gi|294625518|ref|ZP_06704146.1| TldD protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
gi|292600187|gb|EFF44296.1| TldD protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
Length = 481
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 273/477 (57%), Positives = 355/477 (74%), Gaps = 3/477 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L +A + LL P LD L + G + +D+ D YFQ ++ E+W +E+GIVK G SI
Sbjct: 6 LTLAETRLLLPSGLDAGHLDRTFGALLGPGIDFGDLYFQHSRRESWSVEDGIVKDGAHSI 65
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QGVGVRAI+G+KT F YSDDI ++ L+ A +S R+I+ + G + +++ + +LY
Sbjct: 66 EQGVGVRAIAGEKTGFAYSDDIHRDALLEAAQSARAISRE--GGAQSTRSLVRGNGRALY 123
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
TD I ++ K+ LL R+++ R DPRV +V+ +LSG D +LI R+DG++ AD+R
Sbjct: 124 PATDPIDDMDSATKVDLLRRIDQFLRAADPRVKQVMVSLSGGVDTVLIARSDGVLAADVR 183
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYN-YNYFTDMILEKCVSNSVNSALINLEAKPAP 500
PLV+L V +IVE+ GRRE G SG GGRY + F D E ++ AL+NL+A PAP
Sbjct: 184 PLVRLNVQVIVEQGGRRESGYSGGGGRYGYADLFADGRPEGFAREALRQALVNLDAIPAP 243
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG+M VVLGPGWPG+LLHEA+GHGLEGDFNRKG+S ++ IG+R+AS +TIVD+GTL
Sbjct: 244 AGVMPVVLGPGWPGVLLHEAVGHGLEGDFNRKGTSVYAGRIGERVASPGVTIVDDGTLDG 303
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+NIDDEG P+QCTTLIE+G+L GYMQD NARLM ++ TGN RRESFAH+ +PRMT
Sbjct: 304 RRGSLNIDDEGTPSQCTTLIEDGVLVGYMQDSHNARLMGVAPTGNGRRESFAHLTMPRMT 363
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYM G+ PEE+I SVK G+YA NF GGQVDIT+GK+VFSA++AY+I++GK+T PVKG
Sbjct: 364 NTYMRAGQHDPEEMIRSVKKGIYAVNFGGGQVDITSGKYVFSATEAYLIEDGKVTAPVKG 423
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
ATLIG+GP ++KV MIGND+ LD GVGVCGKDGQ VPVGVGQP+L ID ITVGGT
Sbjct: 424 ATLIGNGPETMQKVRMIGNDLALDEGVGVCGKDGQSVPVGVGQPSLLIDGITVGGTQ 480
>gi|308051163|ref|YP_003914729.1| microcin-processing peptidase 2 [Ferrimonas balearica DSM 9799]
gi|307633353|gb|ADN77655.1| microcin-processing peptidase 2 [Ferrimonas balearica DSM 9799]
Length = 482
Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust.
Identities = 265/476 (55%), Positives = 351/476 (73%), Gaps = 10/476 (2%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P +LDE L + LG + + +DYAD Y Q +++E+W+LE+GIVK G+F+I +G+GVR
Sbjct: 10 LLSPAELDEGALHQALGQLHHHSLDYADIYLQASRHESWVLEDGIVKEGSFNIEKGLGVR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSLYSFTDTI 387
AISG+KT F Y+D+IS L + + R IA NGK+ + + + + Y+ D +
Sbjct: 70 AISGEKTGFAYADEISALALTQSAHAARGIAVAGGNGKVNALA---RRQAEARYAALDPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
+S+ K+KLL+ +++ R DPRV +VIA+LSG Y+ +L+ +DG + AD+RPL++L
Sbjct: 127 ASLGSDAKLKLLQEMDQYTRGLDPRVTQVIASLSGVYEEVLVAASDGTLAADVRPLIRLN 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF------TDMILEKCVSNSVNSALINLEAKPAPA 501
++I+ + RRE G++G GGRY Y+ +M +V +NLEA APA
Sbjct: 187 CSVIMAEGDRRERGSAGMGGRYGYDSLLELDSNGEMRAFALCREAVRQGSVNLEAGEAPA 246
Query: 502 GIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANR 561
G M VVLGPGWPG+LLHEA+GHGLEGDFNRKGSS FS IG+++AS+ T+VD+GTL+ R
Sbjct: 247 GEMPVVLGPGWPGVLLHEAVGHGLEGDFNRKGSSLFSGRIGEQVASEHCTVVDDGTLSGR 306
Query: 562 RGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTN 621
RGS++IDDEG P Q LIENGILKGYMQD NARLM ++ TGN RRES+AH+P+PRMTN
Sbjct: 307 RGSLSIDDEGTPGQYNVLIENGILKGYMQDKHNARLMGVAPTGNGRRESYAHLPMPRMTN 366
Query: 622 TYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGA 681
TYML G+ PE II SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NGK+T PVKGA
Sbjct: 367 TYMLAGEHDPEAIIGSVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIENGKLTRPVKGA 426
Query: 682 TLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
TLIG+GP +K +SM+GND+ LD GVG+CGK+GQ VPVGVGQPTLK+D +TVGGT
Sbjct: 427 TLIGNGPEAMKTISMVGNDLALDNGVGICGKEGQSVPVGVGQPTLKLDRLTVGGTQ 482
>gi|289668280|ref|ZP_06489355.1| putative modulator of DNA gyrase TldD [Xanthomonas campestris pv.
musacearum NCPPB 4381]
Length = 481
Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust.
Identities = 272/477 (57%), Positives = 354/477 (74%), Gaps = 3/477 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L +A + LL P LD L + G + +D+ D YFQ ++ E+W +E+GIVK G SI
Sbjct: 6 LTLAETRLLLPSGLDAGHLDRTFGALLGPGIDFGDLYFQHSRRESWSVEDGIVKDGAHSI 65
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QGVGVRAI+G+KT F YSDDI ++ L+ A +S R+I+ + G + +++ + +LY
Sbjct: 66 EQGVGVRAIAGEKTGFAYSDDIHRDALLEAAQSARAISRE--GGAQSTRSLVRGNSRALY 123
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
TD I ++ K+ LL R+++ R DPRV +V+ +LSG D +LI R+DG++ AD+R
Sbjct: 124 PATDPIDDMDSATKVDLLRRIDQYVRAADPRVKQVMVSLSGGVDTVLIARSDGVLAADVR 183
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYN-YNYFTDMILEKCVSNSVNSALINLEAKPAP 500
PLV+L V +IVE+ GRRE G SG GGRY F D E ++ AL+NL+A PAP
Sbjct: 184 PLVRLNVQVIVEQGGRRESGYSGGGGRYGYAELFADGRPEGFAREALRQALVNLDAIPAP 243
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG+M VVLGPGWPG+LLHEA+GHGLEGDFNRKG+S ++ +G+R+AS +TIVD+GTL
Sbjct: 244 AGVMPVVLGPGWPGVLLHEAVGHGLEGDFNRKGTSVYAGRMGERVASPGVTIVDDGTLDG 303
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+NIDDEG P+QCTTLIE+G+L GYMQD NARLM ++ TGN RRESFAH+ +PRMT
Sbjct: 304 RRGSLNIDDEGTPSQCTTLIEDGVLVGYMQDTHNARLMGVASTGNGRRESFAHLTMPRMT 363
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYM G+ PEE+I SVK G+YA NF GGQVDIT+GK+VFSA++AY+I++GK+T PVKG
Sbjct: 364 NTYMRAGQHDPEEMIRSVKKGIYAVNFGGGQVDITSGKYVFSATEAYLIEDGKVTAPVKG 423
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
ATLIG+GP ++KV MIGND+ LD GVGVCGKDGQ VPVGVGQP+L ID ITVGGT
Sbjct: 424 ATLIGNGPETMQKVRMIGNDLALDEGVGVCGKDGQSVPVGVGQPSLLIDGITVGGTQ 480
>gi|88811881|ref|ZP_01127134.1| tldD protein [Nitrococcus mobilis Nb-231]
gi|88790765|gb|EAR21879.1| tldD protein [Nitrococcus mobilis Nb-231]
Length = 486
Score = 560 bits (1443), Expect = e-156, Method: Compositional matrix adjust.
Identities = 276/480 (57%), Positives = 366/480 (76%), Gaps = 5/480 (1%)
Query: 260 HPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNF 319
H LN+AR +L P +L E L ++ G + KVD AD YFQ ++E W+LE+GI+K G+
Sbjct: 8 HNLNLARQSILAPAELSETDLERVFGRLMGPKVDAADLYFQVQRHEAWVLEDGIIKEGSR 67
Query: 320 SINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKIN 378
S++QGVGVRAISG++T F YSD+I L+ A + R+IA +G+++ K + +
Sbjct: 68 SLDQGVGVRAISGEQTGFAYSDEIMLPALLEASSAARAIARSGGDGRLQAWKAGEGL--- 124
Query: 379 SLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVA 438
+LY + + S++ EK+ LL ++ AR +DPRV +V+ +L+G +DV+L+ DG + A
Sbjct: 125 ALYQPLNPLDSLSADEKVALLRELDTEARRQDPRVEQVVVSLAGVHDVVLVATGDGRLSA 184
Query: 439 DIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVS-NSVNSALINLEAK 497
D+RPLV+L VT++VE+NG RE G++G GGR Y F D K + +V AL+NLEA
Sbjct: 185 DVRPLVRLNVTVLVEQNGCRESGSAGGGGRTGYECFLDSERVKGYAREAVRQALLNLEAV 244
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
APAG + VVLGPGWPG+LLHEA+GHGLEGDFNRK +SAF+ +G+R+AS T+VDNGT
Sbjct: 245 EAPAGTLPVVLGPGWPGVLLHEAVGHGLEGDFNRKATSAFAGRLGERVASPLCTVVDNGT 304
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
L++RRGS+NIDDEG PTQCTTLIE G+L GYMQD +NARLM M TGN RRES+AH+P+P
Sbjct: 305 LSSRRGSLNIDDEGTPTQCTTLIERGVLTGYMQDSLNARLMGMRPTGNGRRESYAHLPMP 364
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNTYML G PEEII+SV+ GLYA NF GGQVDIT+GKFVFSAS+AY+I+NG++T P
Sbjct: 365 RMTNTYMLAGPHAPEEIIASVERGLYAVNFGGGQVDITSGKFVFSASEAYLIENGRVTRP 424
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
VKGATLIG+GP++L +VSM+GND++LD G+G CGK+GQ VPVGVGQPTLK+D++TVGGT
Sbjct: 425 VKGATLIGNGPDVLTRVSMVGNDLQLDSGIGTCGKEGQSVPVGVGQPTLKVDALTVGGTQ 484
>gi|294666078|ref|ZP_06731337.1| TldD protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
gi|292604137|gb|EFF47529.1| TldD protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
Length = 481
Score = 560 bits (1443), Expect = e-156, Method: Compositional matrix adjust.
Identities = 272/477 (57%), Positives = 355/477 (74%), Gaps = 3/477 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L +A + LL P LD L + G + +D+ D YFQ ++ E+W +E+GIVK G SI
Sbjct: 6 LTLAETRLLLPSGLDAGHLDRTFGALLGPGIDFGDLYFQHSRRESWSVEDGIVKDGAHSI 65
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QGVGVRAI+G+KT F YSDDI ++ L+ A +S R+I+ + G + +++ + +LY
Sbjct: 66 EQGVGVRAIAGEKTGFAYSDDIHRDALLEAAQSARAISRE--GGAQSTRSLVRGNGRALY 123
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
TD + ++ K+ LL R+++ R DPRV +V+ +LSG D +LI R+DG++ AD+R
Sbjct: 124 PATDPVDDMDSATKVDLLRRIDQFLRAADPRVKQVMVSLSGGVDTVLIARSDGVLAADVR 183
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYN-YNYFTDMILEKCVSNSVNSALINLEAKPAP 500
PLV+L V +IVE+ GRRE G SG GGRY + F D E ++ AL+NL+A PAP
Sbjct: 184 PLVRLNVQVIVEQGGRRESGYSGGGGRYGYADLFADGRPEGFAREALRQALVNLDAIPAP 243
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG+M VVLGPGWPG+LLHEA+GHGLEGDFNRKG+S ++ IG+R+AS +TIVD+GTL
Sbjct: 244 AGVMPVVLGPGWPGVLLHEAVGHGLEGDFNRKGTSVYAGRIGERVASPGVTIVDDGTLDG 303
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+NIDDEG P+QCTTLIE+G+L GYMQD NARLM ++ TGN RRESFAH+ +PRMT
Sbjct: 304 RRGSLNIDDEGTPSQCTTLIEDGVLVGYMQDSHNARLMGVAPTGNGRRESFAHLTMPRMT 363
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYM G+ PEE+I SVK G+YA NF GGQVDIT+GK+VFSA++AY+I++GK+T PVKG
Sbjct: 364 NTYMRAGQHDPEEMIRSVKKGIYAVNFGGGQVDITSGKYVFSATEAYLIEDGKVTAPVKG 423
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
ATLIG+GP ++KV MIGND+ LD GVGVCGKDGQ VPVGVGQP+L ID ITVGGT
Sbjct: 424 ATLIGNGPETMQKVRMIGNDLALDEGVGVCGKDGQSVPVGVGQPSLLIDGITVGGTQ 480
>gi|289663225|ref|ZP_06484806.1| putative modulator of DNA gyrase TldD [Xanthomonas campestris pv.
vasculorum NCPPB 702]
Length = 481
Score = 560 bits (1442), Expect = e-156, Method: Compositional matrix adjust.
Identities = 267/477 (55%), Positives = 349/477 (73%), Gaps = 3/477 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L +A + LL P LD L + G + +D+ D YFQ ++ E+W +E+GIVK G SI
Sbjct: 6 LTLAETRLLLPSGLDAGHLDRTFGALLGPGIDFGDLYFQHSRRESWSVEDGIVKDGAHSI 65
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QGVGVRAI+G+KT F YSDDI ++ L+ A +S R+I+ + G + +++ + +LY
Sbjct: 66 EQGVGVRAIAGEKTGFAYSDDIHRDALLEAAQSARAISRE--GGAQSTRSLVRGNSRALY 123
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
TD I ++ K+ LL R+++ R DPRV +V+ +LSG D +LI R+DG++ AD+R
Sbjct: 124 PATDPIDDMDSATKVDLLRRIDQYVRAADPRVKQVMVSLSGGVDTVLIARSDGVLAADVR 183
Query: 442 PLVQLFVTIIVEKNGRRE-IGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAP 500
PLV+L V +IVE+ GRRE G G F D E ++ AL+NL+A PAP
Sbjct: 184 PLVRLNVQVIVEQGGRRESGYFGGGGRYGYAELFADGRPEGFAREALRQALVNLDAIPAP 243
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG+M VVLGPGWPG+LLHEA+GHGLEGDFNRKG+S ++ +G+R+AS +TIVD+GTL
Sbjct: 244 AGVMPVVLGPGWPGVLLHEAVGHGLEGDFNRKGTSVYAGRMGERVASPGVTIVDDGTLDG 303
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+NIDDEG P+QCTTLIE+G+L GYMQD NARLM ++ TGN RRESFAH+ +PRMT
Sbjct: 304 RRGSLNIDDEGTPSQCTTLIEDGVLVGYMQDTHNARLMGVAPTGNGRRESFAHLTMPRMT 363
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYM G+ PEE+I SVK G+YA NF GGQVDIT+GK+VFSA++AY+I++GK+T PVKG
Sbjct: 364 NTYMRAGQHDPEEMIRSVKKGIYAVNFGGGQVDITSGKYVFSATEAYLIEDGKVTAPVKG 423
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
ATLIG+GP ++KV MIGND+ LD GVGVCGKDGQ VPVGVGQP+L ID ITVGGT
Sbjct: 424 ATLIGNGPETMQKVRMIGNDLALDEGVGVCGKDGQSVPVGVGQPSLLIDGITVGGTQ 480
>gi|424791259|ref|ZP_18217725.1| Putative modulator of DNA gyrase TldD [Xanthomonas translucens pv.
graminis ART-Xtg29]
gi|422797630|gb|EKU25857.1| Putative modulator of DNA gyrase TldD [Xanthomonas translucens pv.
graminis ART-Xtg29]
Length = 480
Score = 560 bits (1442), Expect = e-156, Method: Compositional matrix adjust.
Identities = 270/476 (56%), Positives = 357/476 (75%), Gaps = 3/476 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L++A + LL P LD L + G + +D+ D YFQ ++ E+W +E+GIVK G SI
Sbjct: 6 LSLAETRLLLPAGLDATSLERAFGTLLGPGIDFGDLYFQHSRRESWSVEDGIVKDGAHSI 65
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QGVGVRAISG+KT F YSDDI ++ L+ A +S R+I+ +G + + + + +LY
Sbjct: 66 EQGVGVRAISGEKTGFAYSDDIHRDALLAAAQSARAISR--DGGAQPAQALLRGGGRALY 123
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
D + + K+++L R+++ R DPRV +V+ +LSG D +L+ R+DG++ AD+R
Sbjct: 124 PALDPVDGMGNDLKVEMLRRLDQFLRAADPRVQQVMVSLSGGVDTVLVARSDGVLAADVR 183
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYN-YFTDMILEKCVSNSVNSALINLEAKPAP 500
PLV+L V +IVE+NGRRE G++G GGRY Y F D E ++ AL+NLEA PAP
Sbjct: 184 PLVRLNVQVIVEQNGRRESGHAGGGGRYGYAVLFADGRPEAFAQEALRQALVNLEAVPAP 243
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG+M VVLGPGWPG+LLHEA+GHGLEGDF RKG+S ++ IG+R+AS +TIVD+GTL
Sbjct: 244 AGVMPVVLGPGWPGVLLHEAVGHGLEGDFARKGTSVYAGRIGQRVASPGVTIVDDGTLEG 303
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+N+DDEG PT CTTLIE+G+L GYMQD +NARLM ++ TGN RRESFAH+P+PRMT
Sbjct: 304 RRGSLNVDDEGTPTNCTTLIEDGVLVGYMQDSLNARLMGVAPTGNGRRESFAHLPMPRMT 363
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYML G+ P+E+I SVK GLYA NF GGQVDIT+GK+VFSA++AY+I++GK+T PVKG
Sbjct: 364 NTYMLAGQHDPQEMIRSVKKGLYAVNFGGGQVDITSGKYVFSATEAYLIEDGKVTAPVKG 423
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
ATLIG+GP ++KV MIG+D+ LD GVGVCGKDGQ VPVGVGQP+L ID +TVGGT
Sbjct: 424 ATLIGNGPETMQKVRMIGHDLALDEGVGVCGKDGQSVPVGVGQPSLLIDGLTVGGT 479
>gi|71280464|ref|YP_271201.1| tldD protein [Colwellia psychrerythraea 34H]
gi|71146204|gb|AAZ26677.1| tldD protein [Colwellia psychrerythraea 34H]
Length = 481
Score = 560 bits (1442), Expect = e-156, Method: Compositional matrix adjust.
Identities = 272/484 (56%), Positives = 354/484 (73%), Gaps = 11/484 (2%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+NI LL +DE++L K L +M +VDYADFYFQ +++E W+LE+GIVK G+++I
Sbjct: 1 MNIVEKSLLSDSHIDEEMLSKTLNSMMGRQVDYADFYFQASQHETWVLEDGIVKEGSYNI 60
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNG-KIKIIKNIKKIKINSL 380
+GVGVRAISG+KT F YSDDI+ L A + + IA+ G +K I++
Sbjct: 61 ERGVGVRAISGEKTGFAYSDDITPEALQKAADAAKGIADSGTGASVKAFSRQSPIEV--- 117
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y + + S+ +KI LL +VE AR D RV +VIA++SG Y+ IL++ +DG DI
Sbjct: 118 YQSVEPLGSLTQEQKIDLLHQVEAHARQVDSRVKQVIASISGVYETILVSASDGTFGTDI 177
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILE-------KCVSNSVNSALIN 493
RPLV+L +++VE+NG+RE ++G G R +Y+YF ++ SV AL+N
Sbjct: 178 RPLVRLNCSVLVEENGKRERASAGGGARTDYSYFFEVEAGDNKPRYLAYAEESVRQALVN 237
Query: 494 LEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIV 553
L A APAG VVLG GWPG+LLHEA+GHGLEGDFNRKGSSAFS +G+++ S+ TIV
Sbjct: 238 LVAIEAPAGTFPVVLGAGWPGVLLHEAVGHGLEGDFNRKGSSAFSGKVGQQVTSELCTIV 297
Query: 554 DNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAH 613
D+GTLANRRGSI+IDDEG P Q LIE GILKGYMQD NA LM + TGN RRES+AH
Sbjct: 298 DDGTLANRRGSISIDDEGTPGQYNVLIEKGILKGYMQDKHNAGLMGVKPTGNGRRESYAH 357
Query: 614 IPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGK 673
+P+PRMTNTYML G+ PE+II SVK G+YA NF+GGQVDIT+GKFVF++S+AY+I++GK
Sbjct: 358 LPMPRMTNTYMLAGESSPEDIIKSVKKGIYAPNFAGGQVDITSGKFVFTSSEAYLIEDGK 417
Query: 674 ITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITV 733
IT PVKGATLIG+GP +K++SM+GND+KLD GVGVCGKDGQ +PVGVGQPTLK+D +T+
Sbjct: 418 ITSPVKGATLIGNGPEAMKRISMVGNDLKLDAGVGVCGKDGQSIPVGVGQPTLKVDEMTI 477
Query: 734 GGTN 737
GGT
Sbjct: 478 GGTQ 481
>gi|389780909|ref|ZP_10194385.1| putative Zn-dependent protease-like protein [Rhodanobacter
spathiphylli B39]
gi|388435570|gb|EIL92468.1| putative Zn-dependent protease-like protein [Rhodanobacter
spathiphylli B39]
Length = 479
Score = 560 bits (1442), Expect = e-156, Method: Compositional matrix adjust.
Identities = 285/478 (59%), Positives = 355/478 (74%), Gaps = 8/478 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+ +A S LL P + L ++ + +D AD YFQ +++E+W LEEGIVK G+ SI
Sbjct: 5 IALAESKLLSPGGIATGDLDRVFAQLMGPSIDAADLYFQHSRSESWTLEEGIVKDGSHSI 64
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIK--IIKNIKKIKINS 379
QGVGVRA+SG+KT F YSD+I L+ A K+ R+IA+ NG K + N + +
Sbjct: 65 EQGVGVRAMSGEKTGFAYSDEIVLPQLLEASKAARAIAHDGNGAGKPLALHNAR-----A 119
Query: 380 LYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVAD 439
LY D + S+ +KI LL V+ AR +DPR+ +VI +L+ D ILI +DG + AD
Sbjct: 120 LYPAIDPVESLPNPDKIALLREVDAYARSRDPRIKQVIVSLAATMDTILIAASDGTLAAD 179
Query: 440 IRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSN-SVNSALINLEAKP 498
+RPLV++ V +I E NGRRE G SG GGRY Y + ++ +V AL+NL++
Sbjct: 180 VRPLVRINVQVIAEANGRREQGYSGGGGRYGYRELIENGRALAFADEAVRQALVNLDSVD 239
Query: 499 APAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL 558
APAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAFS IG+R+A+K +TIVD+GTL
Sbjct: 240 APAGQMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFSGRIGQRVAAKGVTIVDDGTL 299
Query: 559 ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPR 618
A RRGS++IDDEG PT+CTTLIE+GILKGYMQD +NARLM M+ TGN RRESF +P+PR
Sbjct: 300 AGRRGSLSIDDEGTPTECTTLIEDGILKGYMQDKLNARLMGMAPTGNGRRESFTALPMPR 359
Query: 619 MTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPV 678
MTNTYML G+ P+EII SVK GLYA NF GGQVDITNGKF FSAS+AY+I++G+IT PV
Sbjct: 360 MTNTYMLAGQHDPQEIIRSVKKGLYAPNFGGGQVDITNGKFTFSASEAYLIEDGRITRPV 419
Query: 679 KGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
KGATLIG GP++L +VSMIGND+ LD GVGVCGKDGQ VPVGVGQPTLKIDS+TVGGT
Sbjct: 420 KGATLIGSGPDVLNRVSMIGNDLALDEGVGVCGKDGQSVPVGVGQPTLKIDSMTVGGT 477
>gi|188990952|ref|YP_001902962.1| modulator of DNA gyrase TldD [Xanthomonas campestris pv. campestris
str. B100]
gi|167732712|emb|CAP50906.1| Putative modulator of DNA gyrase TldD [Xanthomonas campestris pv.
campestris]
Length = 481
Score = 560 bits (1442), Expect = e-156, Method: Compositional matrix adjust.
Identities = 275/477 (57%), Positives = 351/477 (73%), Gaps = 3/477 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L +A S LL P LD L + G + +D+ D YFQ ++ E+W +E+GIVK G SI
Sbjct: 6 LTLAESRLLLPSGLDTGHLDRTFGALLGPGIDFGDLYFQHSRRESWSVEDGIVKDGAHSI 65
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QGVGVRAISG+KT F YSDDI + L+ A +S R+I+ +G + + + + +LY
Sbjct: 66 EQGVGVRAISGEKTGFAYSDDIQREALLEAAQSARAISR--DGGAQSTRTLVRGNGRALY 123
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
TD I ++ K+ LL R+++ R D RV +V+ NLSG D +LI R+DG++ AD+R
Sbjct: 124 PATDPIDDMDSATKVDLLRRIDQYLRAADARVKQVMVNLSGGVDTVLIARSDGVLAADVR 183
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYN-YNYFTDMILEKCVSNSVNSALINLEAKPAP 500
PLV+L V +IVE GRRE G SG GGRY F D E ++ AL+NL+A PAP
Sbjct: 184 PLVRLNVQVIVEHGGRRESGYSGGGGRYGYAELFADGRPEGFAREALRQALVNLDAIPAP 243
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG+M VVLGPGWPG+LLHEA+GHGLEGDFNRKG+S ++ IG+R+ASK +TIVD+GTL
Sbjct: 244 AGVMPVVLGPGWPGVLLHEAVGHGLEGDFNRKGTSVYAGRIGERVASKGVTIVDDGTLDG 303
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+NIDDEG P+QCTTLIE+G+L GYMQD NARLM ++ TGN RRESFAH+ +PRMT
Sbjct: 304 RRGSLNIDDEGTPSQCTTLIEDGVLVGYMQDTHNARLMGVAPTGNGRRESFAHLTMPRMT 363
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYM G+ P+E+I SVK G+YA NF GGQVDIT+GK+VFSA++AY+I++GK+T PVKG
Sbjct: 364 NTYMRAGEHDPQEMIRSVKKGIYAVNFGGGQVDITSGKYVFSATEAYLIEDGKVTAPVKG 423
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
ATLIG+GP ++KV MIGND+ LD GVGVCGKDGQ VPVGVGQP+L ID ITVGGT
Sbjct: 424 ATLIGNGPETMQKVRMIGNDLALDEGVGVCGKDGQSVPVGVGQPSLLIDGITVGGTQ 480
>gi|21232037|ref|NP_637954.1| TldD protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66767836|ref|YP_242598.1| TldD protein [Xanthomonas campestris pv. campestris str. 8004]
gi|21113776|gb|AAM41878.1| TldD protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66573168|gb|AAY48578.1| TldD protein [Xanthomonas campestris pv. campestris str. 8004]
Length = 481
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 275/476 (57%), Positives = 351/476 (73%), Gaps = 3/476 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L +A S LL P LD L + G + +D+ D YFQ ++ E+W +E+GIVK G SI
Sbjct: 6 LTLAESRLLLPSGLDTGHLDRTFGALLGPGIDFGDLYFQHSRRESWSVEDGIVKDGAHSI 65
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QGVGVRAISG+KT F YSDDI + L+ A +S R+I+ +G + + + + +LY
Sbjct: 66 EQGVGVRAISGEKTGFAYSDDIQREALLEAAQSARAISR--DGGAQSTRTLVRGNGRALY 123
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
TD I ++ K+ LL R+++ R D RV +V+ NLSG D +LI R+DG++ AD+R
Sbjct: 124 PATDPIDDMDSATKVDLLRRIDQYLRAADARVKQVMVNLSGGVDTVLIARSDGVLAADVR 183
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYN-YNYFTDMILEKCVSNSVNSALINLEAKPAP 500
PLV+L V +IVE GRRE G SG GGRY F D E ++ AL+NL+A PAP
Sbjct: 184 PLVRLNVQVIVEHGGRRESGYSGGGGRYGYAELFADGRPEGFAREALRQALVNLDAIPAP 243
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG+M VVLGPGWPG+LLHEA+GHGLEGDFNRKG+S ++ IG+R+ASK +TIVD+GTL
Sbjct: 244 AGVMPVVLGPGWPGVLLHEAVGHGLEGDFNRKGTSVYAGRIGERVASKGVTIVDDGTLDG 303
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+NIDDEG P+QCTTLIE+G+L GYMQD NARLM ++ TGN RRESFAH+ +PRMT
Sbjct: 304 RRGSLNIDDEGTPSQCTTLIEDGVLVGYMQDTHNARLMGVAPTGNGRRESFAHLTMPRMT 363
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYM G+ P+E+I SVK G+YA NF GGQVDIT+GK+VFSA++AY+I++GK+T PVKG
Sbjct: 364 NTYMRAGEHDPQEMIRSVKKGIYAVNFGGGQVDITSGKYVFSATEAYLIEDGKVTAPVKG 423
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
ATLIG+GP ++KV MIGND+ LD GVGVCGKDGQ VPVGVGQP+L ID ITVGGT
Sbjct: 424 ATLIGNGPETMQKVRMIGNDLALDEGVGVCGKDGQSVPVGVGQPSLLIDGITVGGT 479
>gi|188577770|ref|YP_001914699.1| protein TldD [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188522222|gb|ACD60167.1| TldD [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 481
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 269/477 (56%), Positives = 353/477 (74%), Gaps = 3/477 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L +A + LL P LD L + G + +D+ D YFQ ++ E+W +E+GIVK G SI
Sbjct: 6 LTLAETRLLLPSGLDAGHLDRTFGALLGPGIDFGDLYFQHSRRESWSVEDGIVKDGTHSI 65
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QGVGVRAI+G+KT F YSDDI ++ L+ A S R+I+ + G + +++ + +LY
Sbjct: 66 EQGVGVRAIAGEKTGFAYSDDIHRDALLEAAHSARAISRE--GGAQSTRSLVRGSGRALY 123
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
TD + ++ K+ LL R+++ R DPRV +V+ +LSG D +LI R+DG++ D+R
Sbjct: 124 PATDPVDDMDSATKVDLLRRIDQFLRAADPRVKQVMVSLSGGVDTVLIARSDGVLATDVR 183
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYN-YNYFTDMILEKCVSNSVNSALINLEAKPAP 500
PLV+L V +IVE+ GRRE G SG GGRY F D E ++ AL+NL+A PAP
Sbjct: 184 PLVRLNVQVIVEQGGRRESGYSGGGGRYGYAELFADGRPEGFAREALRQALVNLDAIPAP 243
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG+M VVLGPGWPG+LLHEA+GHGLEGDFNRKG+S ++ +G+R+AS +TIVD+GTL
Sbjct: 244 AGVMPVVLGPGWPGVLLHEAVGHGLEGDFNRKGTSVYAGRMGERVASPGVTIVDDGTLDG 303
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+NIDDEG P+QCTTLIE+G+L GYMQD NARLM ++ TGN RRESFAH+ +PRMT
Sbjct: 304 RRGSLNIDDEGTPSQCTTLIEDGVLVGYMQDTHNARLMGVAPTGNGRRESFAHLTMPRMT 363
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYM G+ HPEE+I +VK G+YA NF GGQVDIT+GK+VFSA++AY+I++G++T PVKG
Sbjct: 364 NTYMRAGQHHPEEMIRAVKKGIYAVNFGGGQVDITSGKYVFSATEAYLIEDGQVTAPVKG 423
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
ATLIG+GP ++KV MIGND+ LD GVGVCGKDGQ VPVGVGQP+L ID ITVGGT
Sbjct: 424 ATLIGNGPETMQKVRMIGNDLALDEGVGVCGKDGQSVPVGVGQPSLLIDGITVGGTQ 480
>gi|78048479|ref|YP_364654.1| modulator of DNA gyrase TldD [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78036909|emb|CAJ24602.1| putative modulator of DNA gyrase TldD [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 481
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 273/477 (57%), Positives = 353/477 (74%), Gaps = 3/477 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L +A + LL P LD L + G + +D+ D YFQ ++ E+W +E+GIVK G SI
Sbjct: 6 LTLAETRLLLPSGLDAGHLDRTFGALLGPGIDFGDLYFQHSRRESWSVEDGIVKDGAHSI 65
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QGVGVRAI+G+KT F YSDDI ++ L+ A +S R+I+ + G + + + + +LY
Sbjct: 66 EQGVGVRAIAGEKTGFAYSDDIHRDALLEAAQSARAISRE--GGAQSTRALVRGNGRALY 123
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
TD I ++ K+ LL R+++ R DPRV +V+ +LSG D +LI R+DG++ AD+R
Sbjct: 124 PATDPIDDMDSATKVDLLRRIDQFLRAADPRVKQVMVSLSGGVDTVLIARSDGVLAADVR 183
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYN-YNYFTDMILEKCVSNSVNSALINLEAKPAP 500
PLV+L V +IVE+ GRRE G SG GGRY F D E ++ AL+NL+A PAP
Sbjct: 184 PLVRLNVQVIVEQGGRRESGYSGGGGRYGYAELFADGRPEGFAREALRQALVNLDAIPAP 243
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG+M VVLGPGWPG+LLHEA+GHGLEGDFNRKG+S ++ IG+R+AS +TIVD+GTL
Sbjct: 244 AGVMPVVLGPGWPGVLLHEAVGHGLEGDFNRKGTSVYAGRIGERVASPGVTIVDDGTLDG 303
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+NIDDEG P+QCTTLIE+G+L GYMQD NARLM ++ TGN RRESFAH+ +PRMT
Sbjct: 304 RRGSLNIDDEGTPSQCTTLIEDGVLVGYMQDSHNARLMGVAPTGNGRRESFAHLTMPRMT 363
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYM G+ PEE+I SVK G+YA NF GGQVDIT+GK+VFSA++AY+I++GK+T PVKG
Sbjct: 364 NTYMRAGQHDPEEMIRSVKKGIYAVNFGGGQVDITSGKYVFSATEAYLIEDGKVTAPVKG 423
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
ATLIG+GP ++KV MIGND+ LD GVGVCGKDGQ VPVGVGQP+L ID ITVGGT
Sbjct: 424 ATLIGNGPETMQKVRMIGNDLALDEGVGVCGKDGQSVPVGVGQPSLLIDGITVGGTQ 480
>gi|121998913|ref|YP_001003700.1| C69 family peptidase [Halorhodospira halophila SL1]
gi|121590318|gb|ABM62898.1| microcin-processing peptidase 2, Unknown type peptidase, MEROPS
family U62 [Halorhodospira halophila SL1]
Length = 490
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 270/491 (54%), Positives = 360/491 (73%), Gaps = 3/491 (0%)
Query: 248 VKNCILISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENW 307
+KN + PL+ A + LL P LDE L ++ + + VD+AD YFQ + E W
Sbjct: 1 MKNHAEAATATRDPLHHAEAQLLAPAALDEARLGQVFSRLLRPGVDFADLYFQAARREAW 60
Query: 308 ILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIK 367
+LE+GIV+ G++SI++GVGVRA+SG+KT F Y D+I L++A + ++A +G+ +
Sbjct: 61 VLEDGIVREGSYSIDRGVGVRAVSGEKTGFAYCDEIGLEALLDASSAAGAVAR--SGQSR 118
Query: 368 IIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVI 427
+ + LY D ++S++ +K+ LL R E AR DPR++ V+A+L+G +D I
Sbjct: 119 SLAAFRAGGGRGLYRGDDPLASLSADDKVALLHRAEAAARAVDPRIVHVVASLAGAHDTI 178
Query: 428 LITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTD-MILEKCVSNS 486
L+ ++G DIRPLV+L V+++ RRE G+SG GGRY+Y F + +E +
Sbjct: 179 LVANSEGGWAGDIRPLVRLNVSVLAASGERRESGSSGGGGRYDYQQFVEPERVEAYAREA 238
Query: 487 VNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIA 546
AL+NLEA+ APAG + VVLGPGWPG+LLHEA+GHGLEGDFNRKG+SAFS IG+R+A
Sbjct: 239 ARQALVNLEAEEAPAGHLPVVLGPGWPGVLLHEAVGHGLEGDFNRKGTSAFSGRIGERVA 298
Query: 547 SKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNA 606
S T+VD+GT+A RRGS+NIDDEG+P+QC TLIE+G+L GYMQD NA LM M+ TGNA
Sbjct: 299 SPLCTVVDDGTIAQRRGSLNIDDEGHPSQCNTLIEDGVLTGYMQDRQNAGLMGMARTGNA 358
Query: 607 RRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKA 666
RRES+AH+P+PRMTNTYML G PEEII+SV GLYA NF GGQVDIT+GKFVFSAS+A
Sbjct: 359 RRESYAHLPMPRMTNTYMLAGPHDPEEIIASVDQGLYAVNFGGGQVDITSGKFVFSASEA 418
Query: 667 YIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTL 726
Y I+NG+I +PVKGATLIG+GP++L +VSM+GND+ LD G+GVCGK+GQ VPVGVGQPTL
Sbjct: 419 YWIENGRIQHPVKGATLIGNGPDVLTRVSMVGNDLALDGGIGVCGKEGQSVPVGVGQPTL 478
Query: 727 KIDSITVGGTN 737
K+D +TVGGT
Sbjct: 479 KVDGMTVGGTQ 489
>gi|440730898|ref|ZP_20910958.1| modulator of DNA gyrase [Xanthomonas translucens DAR61454]
gi|440376269|gb|ELQ12946.1| modulator of DNA gyrase [Xanthomonas translucens DAR61454]
Length = 480
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 270/476 (56%), Positives = 357/476 (75%), Gaps = 3/476 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L++A + LL P LD L + G + +D+ D YFQ ++ E+W +E+GIVK G SI
Sbjct: 6 LSLAETRLLLPAGLDATSLERAFGTLLGPGIDFGDLYFQHSRRESWSVEDGIVKDGAHSI 65
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QGVGVRAISG+KT F YSDDI ++ L+ A +S R+I+ +G + + + + +LY
Sbjct: 66 EQGVGVRAISGEKTGFAYSDDIHRDALLAAAQSARAISR--DGGAQPAQALLRGNGRALY 123
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
D + + K+++L R+++ R DPRV +V+ +LSG D +L+ R+DG++ AD+R
Sbjct: 124 PALDPVDGMGNDLKVEMLRRLDQFLRAADPRVQQVMVSLSGGVDTVLVARSDGVLAADVR 183
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYN-YFTDMILEKCVSNSVNSALINLEAKPAP 500
PLV+L V +IVE+NGRRE G++G GGRY Y F D E ++ AL+NLEA PAP
Sbjct: 184 PLVRLNVQVIVEQNGRRESGHAGGGGRYGYAVLFADGRPEAFAKEALRQALVNLEAVPAP 243
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG+M VVLGPGWPG+LLHEA+GHGLEGDF RKG+S ++ IG+R+AS +TIVD+GTL
Sbjct: 244 AGVMPVVLGPGWPGVLLHEAVGHGLEGDFARKGTSVYAGRIGQRVASPGVTIVDDGTLEG 303
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+N+DDEG PT CTTLIE+G+L GYMQD +NARLM ++ TGN RRESFAH+P+PRMT
Sbjct: 304 RRGSLNVDDEGTPTNCTTLIEDGVLVGYMQDSLNARLMGVAPTGNGRRESFAHLPMPRMT 363
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYML G+ P+E+I SVK GLYA NF GGQVDIT+GK+VFSA++AY+I++GK+T PVKG
Sbjct: 364 NTYMLAGQHDPQEMIRSVKKGLYAVNFGGGQVDITSGKYVFSATEAYLIEDGKVTAPVKG 423
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
ATLIG+GP ++KV MIG+D+ LD GVGVCGKDGQ VPVGVGQP+L ID +TVGGT
Sbjct: 424 ATLIGNGPETMQKVRMIGHDLALDEGVGVCGKDGQSVPVGVGQPSLLIDGLTVGGT 479
>gi|92114356|ref|YP_574284.1| microcin-processing peptidase 2 [Chromohalobacter salexigens DSM
3043]
gi|91797446|gb|ABE59585.1| microcin-processing peptidase 2, Unknown type peptidase, MEROPS
family U62 [Chromohalobacter salexigens DSM 3043]
Length = 484
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 269/481 (55%), Positives = 356/481 (74%), Gaps = 3/481 (0%)
Query: 258 NIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTG 317
N LN A S+LL P LD L LG+ VDYAD YFQ T E+WILE+G VK
Sbjct: 5 NDSALNQATSLLLAPGGLDLSALDTGLGHAMGPGVDYADLYFQRTWQESWILEDGEVKDA 64
Query: 318 NFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKI 377
++I+ GVGVR ++G+KT F YS+ IS + L + + IA +G+ + +
Sbjct: 65 GYNIDGGVGVRTLAGEKTGFAYSNQISADALADTGRIAAGIAR--SGQRVSPQAVHAAMP 122
Query: 378 NSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIV 437
Y+ D ++ ++ +KI +L+ +++AR DP V +V A+LSGEY+V+L+ +DG +
Sbjct: 123 TRRYADVDPLAGLSAADKIAMLKTADRVARAADPCVSQVSASLSGEYEVVLVRASDGTLA 182
Query: 438 ADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEA 496
ADIRPLV+ V++I ++GRRE G++G GGRY+ D + E+ +V AL+NLEA
Sbjct: 183 ADIRPLVRFNVSVIAVRDGRRERGSAGGGGRYSMARLRDDNVAERFAKEAVRQALVNLEA 242
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPGILLHEA+GHGLEGDFNRKGSSAF+ IG+R+AS +T+VD+G
Sbjct: 243 VDAPAGQMPVVLGNGWPGILLHEAVGHGLEGDFNRKGSSAFAGRIGERVASPGVTVVDDG 302
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TLA+RRGS++IDDEG PTQC TLIE+GILKGYMQD +NARLM M+ TGNARRES+AH +
Sbjct: 303 TLADRRGSLSIDDEGTPTQCNTLIEDGILKGYMQDKLNARLMGMAPTGNARRESYAHATM 362
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNT ML G+ P++I+ SVK G+YA +F GGQVDIT+G+FVFSAS+AY+I++GKIT
Sbjct: 363 PRMTNTCMLAGQDDPDDIVKSVKRGIYAVSFGGGQVDITSGRFVFSASEAYLIEDGKITT 422
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG+GP ++++VSMIG+D++LD G+GVCGK+GQ VPVGVGQPTLK+D +TVGGT
Sbjct: 423 PVKGATLIGNGPEVMQRVSMIGHDLELDTGIGVCGKEGQGVPVGVGQPTLKVDELTVGGT 482
Query: 737 N 737
Sbjct: 483 Q 483
>gi|384428573|ref|YP_005637933.1| TldD protein [Xanthomonas campestris pv. raphani 756C]
gi|341937676|gb|AEL07815.1| TldD protein [Xanthomonas campestris pv. raphani 756C]
Length = 481
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 274/477 (57%), Positives = 351/477 (73%), Gaps = 3/477 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L +A S LL P LD L + G + +D+ D YFQ ++ E+W +E+GIVK G SI
Sbjct: 6 LTLAESRLLLPSGLDTGHLDRTFGALLGPGIDFGDLYFQHSRRESWSVEDGIVKDGAHSI 65
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QGVGVRAISG+KT F YSDDI + L+ A +S R+I+ +G + + + + +LY
Sbjct: 66 EQGVGVRAISGEKTGFAYSDDIQREALLEAAQSARAISR--DGGAQSTRTLVRGNGRALY 123
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
TD I ++ K+ LL R+++ R D RV +V+ +LSG D +LI R+DG++ AD+R
Sbjct: 124 PATDPIDDMDSATKVDLLRRIDQYLRAADARVKQVMVSLSGGVDTVLIARSDGVLAADVR 183
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYN-YNYFTDMILEKCVSNSVNSALINLEAKPAP 500
PLV+L V +IVE GRRE G SG GGRY F D E ++ AL+NL+A PAP
Sbjct: 184 PLVRLNVQVIVEHGGRRESGYSGGGGRYGYAELFADGRPEGFAREALRQALVNLDAIPAP 243
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG+M VVLGPGWPG+LLHEA+GHGLEGDFNRKG+S ++ IG+R+ASK +TIVD+GTL
Sbjct: 244 AGVMPVVLGPGWPGVLLHEAVGHGLEGDFNRKGTSVYAGRIGERVASKGVTIVDDGTLDG 303
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+NIDDEG P+QCTTLIE+G+L GYMQD NARLM ++ TGN RRESFAH+ +PRMT
Sbjct: 304 RRGSLNIDDEGTPSQCTTLIEDGVLVGYMQDTHNARLMGVAPTGNGRRESFAHLTMPRMT 363
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYM G+ P+E+I SVK G+YA NF GGQVDIT+GK+VFSA++AY+I++GK+T PVKG
Sbjct: 364 NTYMRAGEHDPQEMIRSVKKGIYAVNFGGGQVDITSGKYVFSATEAYLIEDGKVTAPVKG 423
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
ATLIG+GP ++KV MIGND+ LD GVGVCGKDGQ VPVGVGQP+L ID ITVGGT
Sbjct: 424 ATLIGNGPETMQKVRMIGNDLALDEGVGVCGKDGQSVPVGVGQPSLLIDGITVGGTQ 480
>gi|251791387|ref|YP_003006108.1| protease TldD [Dickeya zeae Ech1591]
gi|247540008|gb|ACT08629.1| peptidase U62 modulator of DNA gyrase [Dickeya zeae Ech1591]
Length = 481
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 268/474 (56%), Positives = 351/474 (74%), Gaps = 9/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL L + L ILG++ + ++DYAD YFQ + +E+W+LE+ I+K G++ I+QGVG+R
Sbjct: 10 LLTANKLSHQDLQSILGSLSERRLDYADLYFQSSYHESWVLEDRIIKDGSYHIDQGVGIR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSLYSFTDTI 387
AISG+KT F Y+D I+ N L + ++ RSI Q NG +K + + LY + +
Sbjct: 70 AISGEKTGFAYADQITLNALRQSAQAARSIVREQGNGAVKTLGEVPH---RGLYPQANPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S++ EKI LL+RV+ AR D RV +V +L+G Y++IL+ DG + AD+RPLV+L
Sbjct: 127 DSLSREEKIALLQRVDATARAADSRVQEVTVSLTGVYELILVAATDGTLAADVRPLVRLS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEAKPAPAG 502
V+++VE+NGRRE G+SG G R Y+YF ++ E +V AL+NL A APAG
Sbjct: 187 VSVLVEENGRRERGSSGGGARTGYDYFWQQAEGEVRAEAWAKEAVRMALVNLSAVAAPAG 246
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +GK +AS+ T+VD+GTL RR
Sbjct: 247 PMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGKLVASELCTVVDDGTLEGRR 306
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNT
Sbjct: 307 GSLAIDDEGVPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNT 366
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML GK PEEII+SV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+NG++T PVKGAT
Sbjct: 367 YMLAGKSTPEEIIASVEYGLYAPNFGGGQVDITSGKFVFSTSEAYLIENGRVTKPVKGAT 426
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
LIG G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK+DSITVGGT
Sbjct: 427 LIGSGIEAMQQISMVGNDLALDRGVGVCGKEGQSLPVGVGQPTLKLDSITVGGT 480
>gi|417709334|ref|ZP_12358358.1| modulator of DNA gyrase family protein [Shigella flexneri VA-6]
gi|420333176|ref|ZP_14834820.1| modulator of DNA gyrase family protein [Shigella flexneri K-1770]
gi|332998365|gb|EGK17964.1| modulator of DNA gyrase family protein [Shigella flexneri VA-6]
gi|391247287|gb|EIQ06537.1| modulator of DNA gyrase family protein [Shigella flexneri K-1770]
Length = 481
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 264/481 (54%), Positives = 360/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRAISG+KT F Y+D IS L + ++ R+I S +GK++ + ++ + L
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRDSGDGKVQTLGAVEH---SPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE++G+RE G SG GGR++Y +F ++ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEEDGKRERGASGGGGRFSYEFFLADLDGEVRADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM M+ TGN RRES+AH+P
Sbjct: 300 GTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KPVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|389795130|ref|ZP_10198265.1| putative Zn-dependent protease-like protein [Rhodanobacter fulvus
Jip2]
gi|388431263|gb|EIL88347.1| putative Zn-dependent protease-like protein [Rhodanobacter fulvus
Jip2]
Length = 479
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 283/476 (59%), Positives = 353/476 (74%), Gaps = 10/476 (2%)
Query: 265 ARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQG 324
A LL P L L ++ + +D AD YFQ +++E+W+LEEGIVK G+ SI QG
Sbjct: 8 AERRLLTPGGLAATDLDRVFSQLMGPSIDAADLYFQHSRSESWLLEEGIVKDGSHSIEQG 67
Query: 325 VGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINS---LY 381
VGVRAISG+KT F YSD+I L+ A K+ R+IA+ NG K + +N LY
Sbjct: 68 VGVRAISGEKTGFAYSDEIVMPQLLQASKAARAIAHDGNGAGK------PLALNGARQLY 121
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
D + S+ +KI LL V+ AR +DPR+ +VI +L+ D ILI +DG + AD+R
Sbjct: 122 PAIDPVDSLPNPDKIALLREVDAYARSRDPRIKQVIVSLAATVDTILIAASDGTLAADVR 181
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSN-SVNSALINLEAKPAP 500
PLV++ V +I E+NGRRE G+SG GGR++Y + ++ +V AL+NLEA AP
Sbjct: 182 PLVRMSVQVIAEQNGRREQGHSGGGGRHSYRELMENGRALGFADEAVRQALVNLEAVDAP 241
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAF+ IG R+A+ +T+VD+GTLAN
Sbjct: 242 AGSMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRIGDRVAAAGVTVVDDGTLAN 301
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS++IDDEG P++CTTLIENGILKGYMQD +NA LM + TGN RRESF +P+PRMT
Sbjct: 302 RRGSLSIDDEGTPSECTTLIENGILKGYMQDKLNAGLMGVKSTGNGRRESFTALPMPRMT 361
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYML G+ P+EII SVK G+YA NF GGQVDITNGKFVFSAS+AY+I++G+IT PVKG
Sbjct: 362 NTYMLAGQHDPQEIIRSVKRGIYAPNFGGGQVDITNGKFVFSASEAYLIEDGRITRPVKG 421
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
ATLIG GP +L +VSMIGND+KLD GVGVCGKDGQ VPVGVGQPTLKID++TVGGT
Sbjct: 422 ATLIGSGPEVLNRVSMIGNDLKLDEGVGVCGKDGQSVPVGVGQPTLKIDNMTVGGT 477
>gi|432413465|ref|ZP_19656120.1| protein tldD [Escherichia coli KTE39]
gi|430933990|gb|ELC54381.1| protein tldD [Escherichia coli KTE39]
Length = 481
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 264/481 (54%), Positives = 360/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRAISG+KT F Y+D IS L + ++ R+I S +GK++ + ++ + L
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRDSGDGKVQTLGAVEH---SPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE++G+RE G SG GGR++Y +F ++ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEEDGKRERGASGGGGRFDYEFFLADLDGEVRADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM M+ TGN RRES+AH+P
Sbjct: 300 GTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KPVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|344208335|ref|YP_004793476.1| peptidase U62 modulator of DNA gyrase [Stenotrophomonas maltophilia
JV3]
gi|343779697|gb|AEM52250.1| peptidase U62 modulator of DNA gyrase [Stenotrophomonas maltophilia
JV3]
Length = 481
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 268/477 (56%), Positives = 348/477 (72%), Gaps = 3/477 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L +A+ LL P LD L + G + VD+ D YFQ + E+W +E+GIVK G SI
Sbjct: 6 LTLAQDRLLRPGGLDTAGLERTFGQLLGPGVDFGDLYFQHARRESWSVEDGIVKDGAHSI 65
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QGVGVRAISG+KT F YSDDI + L+ A +S R+I+ + G + +++ + +LY
Sbjct: 66 EQGVGVRAISGEKTGFAYSDDIHADALLAAAQSARAISRE--GGAQSGRSLLRGNARALY 123
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
D I I K+++L+R++ R DPRV +V+ +LSG D +LI R+DG++ AD+R
Sbjct: 124 PALDPIDGIGNEAKVEVLKRLDGYLRAADPRVKQVMVSLSGGVDTVLIARSDGVLAADVR 183
Query: 442 PLVQLFVTIIVEKNGRRE-IGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAP 500
PLV+L V +IVE NGRRE G G + F E ++ AL+NLEA PAP
Sbjct: 184 PLVRLNVQVIVEHNGRRESGYAGGGGRYGYEDLFASGRPEALAQEALRQALVNLEAVPAP 243
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG+M VVLGPGWPG+LLHEA+GHGLEGDFNRKG+S ++ IG+R+A+ +TIVD+GTL
Sbjct: 244 AGMMPVVLGPGWPGVLLHEAVGHGLEGDFNRKGTSVYAGRIGERVAAPGVTIVDDGTLDG 303
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+NIDDEG+P+QCTTLIE+GIL GYMQD +NARLM M+ TGN RRESFAH+ +PRMT
Sbjct: 304 RRGSLNIDDEGHPSQCTTLIEDGILVGYMQDSLNARLMGMAPTGNGRRESFAHLTMPRMT 363
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYM G+ P+E+I SVK GLYA NF GGQVDIT+GK+VFSA++AY+I++G+IT PVKG
Sbjct: 364 NTYMRAGQHDPQEMIRSVKKGLYAVNFGGGQVDITSGKYVFSATEAYLIEDGRITTPVKG 423
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
ATLIG+GP ++KV M+GND+ LD GVG+CGKDGQ VPVGVGQP+L I+ ITVGGT
Sbjct: 424 ATLIGNGPETMQKVRMVGNDLALDEGVGICGKDGQSVPVGVGQPSLLIEGITVGGTQ 480
>gi|56459499|ref|YP_154780.1| Zn-dependent protease [Idiomarina loihiensis L2TR]
gi|56178509|gb|AAV81231.1| Predicted Zn-dependent protease [Idiomarina loihiensis L2TR]
Length = 473
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 258/475 (54%), Positives = 349/475 (73%), Gaps = 7/475 (1%)
Query: 268 ILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGV 327
+ L ++L + + K L ++ +D+AD Y Q + NE+W+LE+GI+K G F I G+GV
Sbjct: 1 MTLTDYELSQDDISKALSTLYSGDIDFADIYLQHSVNESWVLEDGIIKDGAFHIETGMGV 60
Query: 328 RAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTI 387
RA+ G+KT F Y+D+I+ L ++ R IA Q G+ K ++ +K ++ S Y + +
Sbjct: 61 RAVQGEKTGFAYADEITLKALQRTSEAARGIARQ--GQSKKVEALKSVQAKSRYEALNPL 118
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
+++ EKI+LL++V+ AR +D RV +V+ +LSG YD +L+ DG + D RPL++L
Sbjct: 119 DTLSEEEKIELLKKVDAHARAQDSRVSQVVVSLSGSYDEVLVAATDGTLATDKRPLIRLN 178
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLEAKPAPAG 502
++I E+NGRRE G++G G R Y +F D ++ +V L+NLEAKPAPAG
Sbjct: 179 CSVITEQNGRRERGSAGGGARVGYEFFLDEASGNARWQRFAEEAVRQGLVNLEAKPAPAG 238
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
M VVLG GWPG+LLHEA+GHGLEGDFNRKGSSA+S IG+++AS TIVD+GTL +RR
Sbjct: 239 NMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSAYSGKIGQQVASPLCTIVDDGTLNDRR 298
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS++IDDEG P+ LIENG+L+GYMQD MNARLM + TGN RRESFAH+P+PRMTNT
Sbjct: 299 GSMSIDDEGTPSGYNVLIENGVLRGYMQDKMNARLMGQATTGNGRRESFAHLPMPRMTNT 358
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML G+ P +II SVK G+YA F+GGQVDIT+G+FVFSAS+AY+I++GKIT P+KGAT
Sbjct: 359 YMLAGESSPGDIIGSVKKGIYAPQFAGGQVDITSGQFVFSASEAYLIEDGKITTPIKGAT 418
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
LIG+GP + +VSM+GND+ LD GVGVCGKDGQ +PVGVGQPTLK+DS+TVGGT
Sbjct: 419 LIGNGPEAMAQVSMVGNDLSLDEGVGVCGKDGQSLPVGVGQPTLKLDSMTVGGTE 473
>gi|346725591|ref|YP_004852260.1| Zn-dependent protease [Xanthomonas axonopodis pv. citrumelo F1]
gi|346650338|gb|AEO42962.1| Zn-dependent protease [Xanthomonas axonopodis pv. citrumelo F1]
Length = 481
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 272/477 (57%), Positives = 352/477 (73%), Gaps = 3/477 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L +A + LL P LD L + G + +D+ D YFQ ++ E+W +E+GIVK G SI
Sbjct: 6 LTLAETRLLLPSGLDAGHLDRTFGALLGPGIDFGDLYFQHSRRESWSVEDGIVKDGAHSI 65
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QGVGVRAI+G+KT F YSDDI ++ L+ A +S R+I+ + G + + + + +LY
Sbjct: 66 EQGVGVRAIAGEKTGFAYSDDIHRDALLEAAQSARAISRE--GGAQSSRALVRGNGRALY 123
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
TD I ++ K+ LL R+++ R DPRV +V+ +LSG D +LI R+DG++ AD+R
Sbjct: 124 PATDPIDDMDSATKVDLLRRIDQFLRAADPRVKQVMVSLSGGVDTVLIARSDGVLAADVR 183
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYN-YNYFTDMILEKCVSNSVNSALINLEAKPAP 500
PLV+L V +IVE+ GRRE G SG GGRY F D E ++ AL+NL+A PAP
Sbjct: 184 PLVRLNVQVIVEQGGRRESGYSGGGGRYGYAELFADGRPEGFAREALRQALVNLDAIPAP 243
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG+M VVLGPGWPG+LLHEA+GHGLEGDFNRKG+S ++ IG+R+AS +TIVD+GTL
Sbjct: 244 AGVMPVVLGPGWPGVLLHEAVGHGLEGDFNRKGTSVYAGRIGERVASPGVTIVDDGTLDG 303
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+N DDEG P+QCTTLIE+G+L GYMQD NARLM ++ TGN RRESFAH+ +PRMT
Sbjct: 304 RRGSLNTDDEGTPSQCTTLIEDGVLVGYMQDSHNARLMGVAPTGNGRRESFAHLTMPRMT 363
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYM G+ PEE+I SVK G+YA NF GGQVDIT+GK+VFSA++AY+I++GK+T PVKG
Sbjct: 364 NTYMRAGQHDPEEMIRSVKKGIYAVNFGGGQVDITSGKYVFSATEAYLIEDGKVTAPVKG 423
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
ATLIG+GP ++KV MIGND+ LD GVGVCGKDGQ VPVGVGQP+L ID ITVGGT
Sbjct: 424 ATLIGNGPETMQKVRMIGNDLALDEGVGVCGKDGQSVPVGVGQPSLLIDGITVGGTQ 480
>gi|345877213|ref|ZP_08828967.1| hypothetical protein Rifp1Sym_ap00180 [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344225762|gb|EGV52111.1| hypothetical protein Rifp1Sym_ap00180 [endosymbiont of Riftia
pachyptila (vent Ph05)]
Length = 492
Score = 557 bits (1435), Expect = e-155, Method: Compositional matrix adjust.
Identities = 269/493 (54%), Positives = 364/493 (73%), Gaps = 8/493 (1%)
Query: 249 KNCILISQKNIHPL-NIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENW 307
+ C+ ++++ L IA +LEP L E+ L ++L + + VD AD YFQ ++ E+W
Sbjct: 3 RRCVAGRRRSMSELIQIANQSILEPAGLAERDLERMLAELSGSGVDAADIYFQSSRLESW 62
Query: 308 ILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIK 367
+LE+G++K G +I+QG G+RAISG+KT F YSD++ LINA K+ R+I +G
Sbjct: 63 VLEDGLIKEGAHNISQGAGIRAISGEKTGFAYSDELQFPALINAAKAARAIVR--SGTEG 120
Query: 368 IIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVI 427
+K LY+ + + S++ EKI LL RV+ AR +DPRV +VI +L G +DV+
Sbjct: 121 SVKVSSVPVSRQLYAPINPLPSLSEAEKIDLLRRVDAEARKQDPRVKQVIVSLVGAHDVV 180
Query: 428 LITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVS--- 484
++ +G + AD+RPLV+L V +IVE+ RRE G+SG G R ++ + D E+ +
Sbjct: 181 MVADLEGRLNADVRPLVRLNVHVIVEQGERREQGSSGGGARASFQFLLDE--ERALGYAR 238
Query: 485 NSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKR 544
+V AL+NLEA APAG++ VVLGPGWPG+LLHEA+GHGLEGDFNRKG+SAFS +G++
Sbjct: 239 EAVRQALVNLEAVAAPAGVLPVVLGPGWPGVLLHEAVGHGLEGDFNRKGTSAFSGRLGEQ 298
Query: 545 IASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITG 604
+AS T+VD+GTL RRGS++IDDEG +Q T LIENGILKGYMQD NARLM + TG
Sbjct: 299 VASSCCTVVDDGTLPGRRGSLSIDDEGVESQNTVLIENGILKGYMQDRHNARLMGVESTG 358
Query: 605 NARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSAS 664
N RRES+AH+P+PRMTNTYML G+ P+EII+SV+ GLYA NF GGQVDIT+G+FVFSAS
Sbjct: 359 NGRRESYAHLPMPRMTNTYMLPGEHDPQEIIASVERGLYAVNFGGGQVDITSGRFVFSAS 418
Query: 665 KAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQP 724
+AY+I+NGK+T PVKGATLIG+GP + ++SM+GND++LDPG+GVCGK+GQ VPVGVGQP
Sbjct: 419 EAYLIENGKVTVPVKGATLIGNGPEAMTRISMVGNDLELDPGIGVCGKEGQSVPVGVGQP 478
Query: 725 TLKIDSITVGGTN 737
TLK+D +TVGGT
Sbjct: 479 TLKLDELTVGGTG 491
>gi|254468182|ref|ZP_05081588.1| peptidase U62, modulator of DNA gyrase [beta proteobacterium KB13]
gi|207086992|gb|EDZ64275.1| peptidase U62, modulator of DNA gyrase [beta proteobacterium KB13]
Length = 477
Score = 556 bits (1434), Expect = e-155, Method: Compositional matrix adjust.
Identities = 270/472 (57%), Positives = 364/472 (77%), Gaps = 5/472 (1%)
Query: 267 SILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVG 326
+++L P +LD + + K++ N+ +DY+D YFQ++KNE + +E+G VK +F+I+ G G
Sbjct: 7 NLILNPAELDNQKIQKVMNNLNHKNIDYSDLYFQYSKNEFFAIEDGAVKNASFNIDNGCG 66
Query: 327 VRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDT 386
VRA+SGDKTA+ Y+D+++ TL + + ++ +S G+ K + I K LY D
Sbjct: 67 VRAVSGDKTAYAYTDEVNFQTLSQSCEIINAL--RSQGQNKSVPQINSNKPRQLYQSIDP 124
Query: 387 ISSINIREK-IKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQ 445
I IN EK I++L+++E +A +D R+IKV A+++ EYD ILI + +DIRPLV+
Sbjct: 125 I--INTGEKKIEILKKLESLAFSRDKRIIKVSASIAAEYDAILIVNKFSDMKSDIRPLVR 182
Query: 446 LFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMK 505
L ++II+E RREIG +G GGR++ +YFTD +L ++ + + A+ NL+A P+PAG+M
Sbjct: 183 LSLSIIIEDKNRREIGTAGGGGRFSIDYFTDDVLNLYINEAYHQAVTNLDAVPSPAGLMP 242
Query: 506 VVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSI 565
VVLGPGWPGILLHEAIGHGLEGDFNRKG+SAFS +GK++A +ITIVD+GT+ +RRGS+
Sbjct: 243 VVLGPGWPGILLHEAIGHGLEGDFNRKGTSAFSKLMGKQVAHSDITIVDDGTIQDRRGSL 302
Query: 566 NIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYML 625
NIDDEGNPTQ T LIENGILK Y+QD +NA+LMNM ITGN RRES+AHIP+PRMTNT M
Sbjct: 303 NIDDEGNPTQRTVLIENGILKNYLQDTLNAKLMNMEITGNGRRESYAHIPMPRMTNTIMT 362
Query: 626 NGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIG 685
NG +P+EII SVK G+YA NF GGQVDIT+GKFVFS+S A++I++GKIT P+KGA+++G
Sbjct: 363 NGNHNPDEIIKSVKKGIYAPNFGGGQVDITSGKFVFSSSLAWLIEDGKITQPIKGASIVG 422
Query: 686 HGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
+GP+ILKKVSM+GND LD GVG CGKDGQ VPVGVGQPTLKID I VGG++
Sbjct: 423 NGPDILKKVSMVGNDSSLDTGVGTCGKDGQSVPVGVGQPTLKIDEILVGGSD 474
>gi|194366670|ref|YP_002029280.1| peptidase U62 modulator of DNA gyrase [Stenotrophomonas maltophilia
R551-3]
gi|194349474|gb|ACF52597.1| peptidase U62 modulator of DNA gyrase [Stenotrophomonas maltophilia
R551-3]
Length = 481
Score = 556 bits (1433), Expect = e-155, Method: Compositional matrix adjust.
Identities = 267/477 (55%), Positives = 349/477 (73%), Gaps = 3/477 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L +A+ LL P LD L + G + VD+ D YFQ + E+W +E+GIVK G SI
Sbjct: 6 LTLAQDRLLRPGGLDTAGLERTFGQLLGPGVDFGDLYFQHARRESWSVEDGIVKDGAHSI 65
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QGVGVRAI+G+KT F YSDDI + L+ A +S R+I+ + G + +++ + +LY
Sbjct: 66 EQGVGVRAIAGEKTGFAYSDDIHADALLAAAQSARAISRE--GGAQSGRSLLRGNARALY 123
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
D I I K+++L+R++ R DPRV +V+ +LSG D +LI R+DG++ AD+R
Sbjct: 124 PALDPIDGIGNEAKVEVLKRLDGYLRAADPRVKQVMVSLSGGVDTVLIARSDGVLGADVR 183
Query: 442 PLVQLFVTIIVEKNGRRE-IGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAP 500
PLV+L V +IVE+NGRRE G G F + E ++ AL+NL+A PAP
Sbjct: 184 PLVRLNVQVIVEQNGRRESGYAGGGGRYGYEELFAEGRPEAFAREALRQALVNLDAVPAP 243
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG+M VVLGPGWPG+LLHEA+GHGLEGDFNRKG+S ++ IG+R+A+ +TIVD+GTL
Sbjct: 244 AGVMPVVLGPGWPGVLLHEAVGHGLEGDFNRKGTSVYAGRIGERVAAPGVTIVDDGTLDG 303
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+NIDDEG+PTQCTTLIE+GIL GYMQD +NARLM M+ TGN RRESFAH+ +PRMT
Sbjct: 304 RRGSLNIDDEGHPTQCTTLIEDGILVGYMQDSLNARLMGMAPTGNGRRESFAHLTMPRMT 363
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYM G+ P+E+I SVK GLYA NF GGQVDIT+GK+VFSA++AY+I++G+IT PVKG
Sbjct: 364 NTYMRAGQHDPQEMIRSVKKGLYAVNFGGGQVDITSGKYVFSATEAYLIEDGRITAPVKG 423
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
ATLIG+GP ++KV M+GND+ LD GVG+CGKDGQ VPVGVGQP+L I+ ITVGGT
Sbjct: 424 ATLIGNGPETMQKVRMVGNDLALDEGVGICGKDGQSVPVGVGQPSLLIEGITVGGTQ 480
>gi|313667600|ref|YP_004047884.1| TLDD protein-like protein [Neisseria lactamica 020-06]
gi|313005062|emb|CBN86494.1| TLDD protein homolog [Neisseria lactamica 020-06]
Length = 567
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 275/513 (53%), Positives = 365/513 (71%), Gaps = 4/513 (0%)
Query: 226 NVLWIQSVLDNKLPIPSTIINQVKNCILISQKNIHPLNIA-RSILLEPFDLDEKILLKIL 284
NV W S + +K I + +HP A R LLE L ++L K L
Sbjct: 55 NVRWQNSYISGTTAHFHNKCRIIKPLIFLCADTMHPTYSAVRERLLEANRLSPELLAKSL 114
Query: 285 GNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDIS 344
G + + VDYAD Y Q T E+W LEEGIVK+G+F I+QGVGVRA+SGDKTAF Y+D +
Sbjct: 115 GIIGAHHVDYADIYCQRTAYESWHLEEGIVKSGSFQIDQGVGVRAVSGDKTAFAYADSLC 174
Query: 345 KNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEK 404
N++ + ++ R+I + GK+ K + + + S +D I+ ++ K+ LL +VE
Sbjct: 175 INSINRSARAVRAIGT-AGGKVSA-KMPSETRGKPVCSASDPIAGLDSAAKVVLLNKVEA 232
Query: 405 IARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSG 464
IA+ DPR+++V+A L+ EYD++ + R DG ADIRP+V+L VT+I + RRE G++G
Sbjct: 233 IAKAADPRIVQVMAGLTCEYDMVYLARLDGKHAADIRPMVRLNVTVIARQGERREQGSAG 292
Query: 465 CGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHG 524
GGRY+ YF + ++ + V +V AL NLE++PAPAG M VVLG GWPG+LLHEA+GHG
Sbjct: 293 GGGRYDLAYFDENLVHRFVDAAVKQALTNLESRPAPAGEMTVVLGNGWPGVLLHEAVGHG 352
Query: 525 LEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGI 584
LEGDFNRKG+S FS IG+R+A+K +T+VD G +A RRGS+NIDDEGN T+ T LIE+GI
Sbjct: 353 LEGDFNRKGTSVFSGRIGERVAAKGVTVVDQGDIAGRRGSLNIDDEGNETRRTVLIEDGI 412
Query: 585 LKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYA 644
L GYMQD NARL TGN RRES+A IP+PRMTNT+M NG + P+EII+S+ G+YA
Sbjct: 413 LVGYMQDETNARLTGTQSTGNGRRESYASIPMPRMTNTFMENGGYEPDEIIASIDKGIYA 472
Query: 645 TNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLD 704
NF GGQVDIT+GKFVFSAS+A+ ++ G++ YPVKGAT+IG+GP +LK VSMIGND LD
Sbjct: 473 VNFGGGQVDITSGKFVFSASEAWWVEGGRLQYPVKGATIIGNGPEVLKHVSMIGNDTALD 532
Query: 705 PGVGVCGKDGQMVPVGVGQPTLKIDS-ITVGGT 736
GVGVCGK+GQ VPVGVGQPTL+ID+ +TVGG+
Sbjct: 533 SGVGVCGKEGQSVPVGVGQPTLRIDAGLTVGGS 565
>gi|294668404|ref|ZP_06733507.1| hypothetical protein NEIELOOT_00322 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291309722|gb|EFE50965.1| hypothetical protein NEIELOOT_00322 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 481
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 265/473 (56%), Positives = 357/473 (75%), Gaps = 3/473 (0%)
Query: 266 RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGV 325
R LL L + L + L + + VDYAD Y Q T E+W LEEG+VK+G+F I+QGV
Sbjct: 10 RRDLLAANGLSPEDLSRSLSAIGTHHVDYADIYCQRTAFESWHLEEGMVKSGSFQIDQGV 69
Query: 326 GVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTD 385
GVRA+SG+KTAF Y+D ++ +++ + ++ R I + G+ I+ + +++ +
Sbjct: 70 GVRAVSGEKTAFAYADSLNADSIRRSAETVRVIG--AAGREAHIRTPSEKYGKAVHQTAN 127
Query: 386 TISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQ 445
I S++ K+ LL RVE++A+ DPR+++V+A L+ EYD+I I R DG ADIRPLV+
Sbjct: 128 PIHSLDSAAKVALLHRVEELAKAADPRIVQVMAGLTCEYDLIYIARLDGRHAADIRPLVR 187
Query: 446 LFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMK 505
L +T+I ++ RRE+G++G GGR++ +YF+D ++ + V+ +V AL NLEA+PAPAG+MK
Sbjct: 188 LSITVIAKQGERREMGSAGGGGRFDLSYFSDKLVTEYVNAAVQQALTNLEARPAPAGLMK 247
Query: 506 VVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSI 565
VVLG GWPG+LLHEA+GHGLEGDFNRK +SAFS IG+R+A+K +T+VD G +A+RRGS+
Sbjct: 248 VVLGSGWPGVLLHEAVGHGLEGDFNRKQTSAFSGKIGQRVAAKGVTVVDQGDIADRRGSL 307
Query: 566 NIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYML 625
NIDDEGN T T LIE+GIL GYMQD NARLM + TGN RRES+A P+PRMTNT+M
Sbjct: 308 NIDDEGNETGRTVLIEDGILVGYMQDETNARLMGVQSTGNGRRESYASAPMPRMTNTFME 367
Query: 626 NGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIG 685
NG PEEII+S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++NGK+ YPVKGAT++G
Sbjct: 368 NGGHDPEEIIASLDKGIYAVNFGGGQVDITSGKFVFSASEAWWVENGKLQYPVKGATIVG 427
Query: 686 HGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS-ITVGGTN 737
+GP +LK VSMIGND LD GVGVCGKDGQ VPVGVGQPTL+ID+ +TVGG+
Sbjct: 428 NGPEVLKHVSMIGNDSALDKGVGVCGKDGQSVPVGVGQPTLRIDAGLTVGGSE 480
>gi|410631055|ref|ZP_11341738.1| TldD protein [Glaciecola arctica BSs20135]
gi|410149422|dbj|GAC18605.1| TldD protein [Glaciecola arctica BSs20135]
Length = 480
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 266/479 (55%), Positives = 357/479 (74%), Gaps = 7/479 (1%)
Query: 263 NIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSIN 322
N+ LL+ +L L L ++++ D+AD YFQ +++E W+LE+GI+K G+++I
Sbjct: 3 NLVEENLLDASNLTRSTLETALDTIYQHDNDFADLYFQSSQHETWVLEDGIIKEGSYNIE 62
Query: 323 QGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYS 382
+GVGVRA+SG+KT F YSD+IS L+ A K++RSI+N S GK KI +K+ +SLY
Sbjct: 63 RGVGVRAVSGEKTGFAYSDEISPEALMKAAKASRSISN-SGGKHKIAP-LKQSHPSSLYY 120
Query: 383 FTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRP 442
+ + + +EKI LL ++ R ++ + +V+ ++SG Y+ ILI DG DIRP
Sbjct: 121 DKNPLLGMQEQEKIALLRAADEYIRKQESALSQVVISISGVYEEILIAATDGTFCTDIRP 180
Query: 443 LVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLEAK 497
L++ ++++EK+GRRE G+SG GGRY Y+YF ++ +++ A IN++A
Sbjct: 181 LIRFNCSVLMEKDGRRERGSSGAGGRYAYDYFVAQDDGRPRYQQVADEAIHMARINIQAV 240
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
PAPAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+++A+K TIVD+GT
Sbjct: 241 PAPAGQMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGASTFSGRIGEQVAAKGCTIVDDGT 300
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
LANRRGS+++DDEG PTQ LIE+GILKGYMQD +NARLM ++ TGN RRES+AH+P+P
Sbjct: 301 LANRRGSLSVDDEGTPTQYNVLIEDGILKGYMQDKLNARLMGVAPTGNGRRESYAHLPMP 360
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNTYML G PEEII+S+ G+YA NF GGQVDIT+GKFVFS S+AY+I+ GKIT P
Sbjct: 361 RMTNTYMLAGNHSPEEIIASIDKGIYAPNFGGGQVDITSGKFVFSTSEAYLIEKGKITTP 420
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
+KGATLIG+GP ++KVSMIGND+ LD GVGVCGKDGQ +PVGVGQPTLK+D +TVGGT
Sbjct: 421 IKGATLIGNGPEAMQKVSMIGNDLALDKGVGVCGKDGQSIPVGVGQPTLKVDELTVGGT 479
>gi|325918726|ref|ZP_08180821.1| microcin-processing peptidase 2 [Xanthomonas vesicatoria ATCC
35937]
gi|325535069|gb|EGD06970.1| microcin-processing peptidase 2 [Xanthomonas vesicatoria ATCC
35937]
Length = 481
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 272/477 (57%), Positives = 351/477 (73%), Gaps = 3/477 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L +A + LL P LD L + G + +D+ D YFQ ++ E+W +E+GIVK G SI
Sbjct: 6 LTLAETRLLLPSGLDAGHLDRTFGALLGPGIDFGDLYFQHSRRESWSVEDGIVKDGAHSI 65
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QGVGVRAI+G+KT F YSDDI + TL+ A +S R+I+ +G + + + + +LY
Sbjct: 66 EQGVGVRAIAGEKTGFAYSDDIQRETLLEAAQSARAISR--DGGAQSTRALVRGNGRALY 123
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
TD I ++ K+ LL R+++ R DPRV +V+ +LSG D +LI R+DG++ AD+R
Sbjct: 124 PATDPIDDMDSATKVDLLRRIDQYVRAADPRVKQVMVSLSGGVDTVLIARSDGVLAADVR 183
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYN-YNYFTDMILEKCVSNSVNSALINLEAKPAP 500
PLV+L V +IVE+ RRE G SG GGRY F D E ++ AL+NL+A PAP
Sbjct: 184 PLVRLNVQVIVEQGSRRESGYSGGGGRYGYAELFADGRPEGFAREALRQALVNLDAIPAP 243
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG+M VVLGPGWPG+LLHEA+GHGLEGDFNRKG+S ++ +G+R+AS +TIVD+GTL
Sbjct: 244 AGVMPVVLGPGWPGVLLHEAVGHGLEGDFNRKGTSVYAGRMGERVASPGVTIVDDGTLDG 303
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+NIDDEG TQCTTLIE+G+L GYMQD NARLM ++ TGN RRESFAH+ +PRMT
Sbjct: 304 RRGSLNIDDEGTQTQCTTLIEDGVLVGYMQDTHNARLMGVAPTGNGRRESFAHLTMPRMT 363
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYM G+ PEE+I SVK G+YA NF GGQVDIT+GK+VFSA++AY+I++GK+T PVKG
Sbjct: 364 NTYMRAGQHDPEEMIRSVKKGIYAVNFGGGQVDITSGKYVFSATEAYLIEDGKVTAPVKG 423
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
ATLIG+GP ++KV MIGND+ LD GVGVCGKDGQ VPVGVGQP+L ID ITVGGT
Sbjct: 424 ATLIGNGPETMQKVRMIGNDLALDEGVGVCGKDGQSVPVGVGQPSLLIDGITVGGTQ 480
>gi|332308458|ref|YP_004436309.1| peptidase U62 modulator of DNA gyrase [Glaciecola sp. 4H-3-7+YE-5]
gi|410646236|ref|ZP_11356689.1| TldD protein [Glaciecola agarilytica NO2]
gi|332175787|gb|AEE25041.1| peptidase U62 modulator of DNA gyrase [Glaciecola sp. 4H-3-7+YE-5]
gi|410134176|dbj|GAC05088.1| TldD protein [Glaciecola agarilytica NO2]
Length = 480
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 262/479 (54%), Positives = 355/479 (74%), Gaps = 7/479 (1%)
Query: 263 NIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSIN 322
N+ LL +LD L L ++++ D+AD YFQ +++E W+LE+GI+K G++++
Sbjct: 3 NLVEQNLLTAANLDRGHLANALDAIYQHDNDFADLYFQASQHETWVLEDGIIKDGSYNVE 62
Query: 323 QGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYS 382
+GVGVRA+SG+KT F YSDDI+ L+ A ++R+IA + GK K+ +K K+++ Y
Sbjct: 63 RGVGVRAVSGEKTGFAYSDDINPEALMQAATASRNIAG-AGGKHKV-NALKSKKVDAKYH 120
Query: 383 FTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRP 442
+ I + EKI LL V+ R ++ + +V+ ++SG Y+ +LI DG DIRP
Sbjct: 121 ADNPILGMQDEEKIALLRAVDSYIRQQETALSQVVVSISGVYEEVLIAATDGTFCTDIRP 180
Query: 443 LVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDM-----ILEKCVSNSVNSALINLEAK 497
LV+L ++++EK+ RRE G+SG GGRY Y YF + EK +++ A +N+ A
Sbjct: 181 LVRLNCSVLMEKDARRERGSSGAGGRYAYEYFLSQEDGRPLYEKIADEAIHMARVNMRAV 240
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS +G+++AS+ TIVD+GT
Sbjct: 241 AAPAGQMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGASTFSGRMGQQVASEGCTIVDDGT 300
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
LANRRGS+++DDEG P+Q LI++GIL GYMQD +NARLM + TGN RRES+AH+P+P
Sbjct: 301 LANRRGSLSVDDEGTPSQYNVLIKDGILTGYMQDKLNARLMGVKPTGNGRRESYAHLPMP 360
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNTYML G++ PEEIISS+KNG+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T P
Sbjct: 361 RMTNTYMLGGQYAPEEIISSIKNGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTKP 420
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
+KGATLIG+GP ++KVSM+GND+ LD GVGVCGKDGQ VPVGVGQPTLK+D +TVGGT
Sbjct: 421 IKGATLIGNGPEAMQKVSMVGNDLALDKGVGVCGKDGQSVPVGVGQPTLKVDELTVGGT 479
>gi|424669652|ref|ZP_18106677.1| hypothetical protein A1OC_03266 [Stenotrophomonas maltophilia
Ab55555]
gi|401071723|gb|EJP80234.1| hypothetical protein A1OC_03266 [Stenotrophomonas maltophilia
Ab55555]
gi|456736910|gb|EMF61636.1| TldD protein [Stenotrophomonas maltophilia EPM1]
Length = 481
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 266/477 (55%), Positives = 348/477 (72%), Gaps = 3/477 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L +A+ LL P LD L + G + VD+ D YFQ + E+W +E+GIVK G SI
Sbjct: 6 LTLAQDRLLRPGGLDTDGLERTFGQLLGPGVDFGDLYFQHARRESWSVEDGIVKDGAHSI 65
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QGVGVRA+SG+KT F YSDDI + L+ A +S R+I+ + G + +++ + +LY
Sbjct: 66 EQGVGVRAMSGEKTGFAYSDDIHADALLAAAQSARAISRE--GGAQSGRSLLRGNSRALY 123
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
D I + K+++L+R++ R DPRV +V+ +LSG D +LI R+DG++ AD+R
Sbjct: 124 PALDPIDGVGNEAKVEVLKRLDGYLRAADPRVKQVMVSLSGGVDTVLIARSDGVLGADVR 183
Query: 442 PLVQLFVTIIVEKNGRRE-IGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAP 500
PLV+L V +IVE NGRRE G G F D E ++ AL+NL+A PAP
Sbjct: 184 PLVRLNVQVIVEHNGRRESGYAGGGGRYGYGELFADGRPEAFAREALRQALVNLDAVPAP 243
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG+M VVLGPGWPG+LLHEA+GHGLEGDFNRKG+S ++ IG+R+A+ +TIVD+GTL
Sbjct: 244 AGVMPVVLGPGWPGVLLHEAVGHGLEGDFNRKGTSVYAGRIGERVAAPGVTIVDDGTLDG 303
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+NIDDEG+P+QCTTLIE+GIL GYMQD +NARLM M+ TGN RRESFAH+ +PRMT
Sbjct: 304 RRGSLNIDDEGHPSQCTTLIEDGILVGYMQDSLNARLMGMAPTGNGRRESFAHLTMPRMT 363
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYM G+ P+E+I SVK GLYA NF GGQVDIT+GK+VFSA++AY+I++G+IT PVKG
Sbjct: 364 NTYMRAGQHDPQEMIRSVKKGLYAVNFGGGQVDITSGKYVFSATEAYLIEDGRITAPVKG 423
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
ATLIG+GP ++KV M+GND+ LD GVG+CGKDGQ VPVGVGQP+L I+ ITVGGT
Sbjct: 424 ATLIGNGPETMQKVRMVGNDLALDEGVGICGKDGQSVPVGVGQPSLLIEGITVGGTQ 480
>gi|333894856|ref|YP_004468731.1| putative peptidase [Alteromonas sp. SN2]
gi|332994874|gb|AEF04929.1| putative suppressor of CsrA inhibitory activity; putative
peptidase; involved in the control of DNA gyrase
[Alteromonas sp. SN2]
Length = 480
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 258/473 (54%), Positives = 359/473 (75%), Gaps = 7/473 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL LD L K L + ++ DYAD YFQ +++E+W+LE+GI+K G+++I +GVGVR
Sbjct: 9 LLSDSGLDVASLEKALSGIHRHDTDYADLYFQSSQHESWVLEDGIIKEGSYNIERGVGVR 68
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
AISG+KT F YSD+IS++ L+ A + RSIA +G + + ++ + + Y + I
Sbjct: 69 AISGEKTGFAYSDEISEDALVKACNAARSIA--PDGGSQKVSSLGRSDYQARYGEKNPIL 126
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ EKI LL+ V+ R ++P +V+ ++SG Y+ IL+ +DG DIRPLV+L
Sbjct: 127 AMQDAEKISLLKAVDAYVRQQEPSANQVVVSISGVYEEILVAASDGTFATDIRPLVRLNC 186
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTD-----MILEKCVSNSVNSALINLEAKPAPAGI 503
++++E RRE G++G GGRY Y++F E+ ++++ A +N++A +PAG
Sbjct: 187 SVLLEDGDRRERGSAGAGGRYAYSFFESDKDGRPYYEQLADDALHMARVNMQAVASPAGA 246
Query: 504 MKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRG 563
M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+R+A+K +T+VD+GTLA+RRG
Sbjct: 247 MPVVLGNGWPGVLLHEAVGHGLEGDFNRKGASTFSGKIGQRVAAKGVTVVDDGTLADRRG 306
Query: 564 SINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTY 623
S+++DDEG PTQ LIE+GILKGYMQD NA+LM+++ TGN RRES+AH+P+PRMTNTY
Sbjct: 307 SLSVDDEGTPTQHNVLIEDGILKGYMQDKHNAKLMSVAPTGNGRRESYAHLPMPRMTNTY 366
Query: 624 MLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATL 683
ML G++ P+EII+S++ G+YA NF+GGQVDIT+GKFVFS+++AY+I+NGKIT PVKGATL
Sbjct: 367 MLEGQYDPKEIIASIEKGIYAPNFAGGQVDITSGKFVFSSAEAYLIENGKITAPVKGATL 426
Query: 684 IGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
IG+GP +++K+SMIGND+ LD GVGVCGKDGQ VPVGVGQPTLKID +TVGGT
Sbjct: 427 IGNGPEVMQKISMIGNDVALDNGVGVCGKDGQSVPVGVGQPTLKIDELTVGGT 479
>gi|190575339|ref|YP_001973184.1| modulator of DNA gyrase [Stenotrophomonas maltophilia K279a]
gi|190013261|emb|CAQ46895.1| putative modulator of DNA gyrase protein [Stenotrophomonas
maltophilia K279a]
Length = 481
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 266/477 (55%), Positives = 348/477 (72%), Gaps = 3/477 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L +A+ LL P LD L + G + VD+ D YFQ + E+W +E+GIVK G SI
Sbjct: 6 LTLAQDRLLRPGGLDTAGLERTFGQLLGPGVDFGDLYFQHARRESWSVEDGIVKDGAHSI 65
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QGVGVRA+SG+KT F YSDDI + L+ A +S R+I+ + G + +++ + +LY
Sbjct: 66 EQGVGVRAMSGEKTGFAYSDDIHADALLAAAQSARAISRE--GGAQSGRSLLRGNSRALY 123
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
D I + K+++L+R++ R DPRV +V+ +LSG D +LI R+DG++ AD+R
Sbjct: 124 PALDPIDGVGNEAKVEVLKRLDGYLRAADPRVKQVMVSLSGGVDTVLIARSDGVLGADVR 183
Query: 442 PLVQLFVTIIVEKNGRRE-IGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAP 500
PLV+L V +IVE NGRRE G G F D E ++ AL+NL+A PAP
Sbjct: 184 PLVRLNVQVIVEHNGRRESGYAGGGGRYGYGELFADGRPEAFAREALRQALVNLDAVPAP 243
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG+M VVLGPGWPG+LLHEA+GHGLEGDFNRKG+S ++ IG+R+A+ +TIVD+GTL
Sbjct: 244 AGVMPVVLGPGWPGVLLHEAVGHGLEGDFNRKGTSVYAGRIGERVAAPGVTIVDDGTLDG 303
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+NIDDEG+P+QCTTLIE+GIL GYMQD +NARLM M+ TGN RRESFAH+ +PRMT
Sbjct: 304 RRGSLNIDDEGHPSQCTTLIEDGILVGYMQDSLNARLMGMAPTGNGRRESFAHLTMPRMT 363
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYM G+ P+E+I SVK GLYA NF GGQVDIT+GK+VFSA++AY+I++G+IT PVKG
Sbjct: 364 NTYMRAGQHDPQEMIRSVKKGLYAVNFGGGQVDITSGKYVFSATEAYLIEDGRITAPVKG 423
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
ATLIG+GP ++KV M+GND+ LD GVG+CGKDGQ VPVGVGQP+L I+ ITVGGT
Sbjct: 424 ATLIGNGPETMQKVRMVGNDLALDEGVGICGKDGQSVPVGVGQPSLLIEGITVGGTQ 480
>gi|345875388|ref|ZP_08827182.1| TldD protein [Neisseria weaveri LMG 5135]
gi|343969296|gb|EGV37513.1| TldD protein [Neisseria weaveri LMG 5135]
Length = 479
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 263/470 (55%), Positives = 358/470 (76%), Gaps = 3/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL+ L + L K L + +KVDYAD Y Q T E+W LEEGIVK+G+F I+QGVGVR
Sbjct: 11 LLDANQLSPERLAKSLALIGSHKVDYADIYCQRTAFESWHLEEGIVKSGSFQIDQGVGVR 70
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+ G+KTAF Y+D ++ +++ + ++ R+I + + +++ K ++++ ++ I+
Sbjct: 71 AVVGEKTAFAYADSLNADSVDRSAQAVRAIGSAGQAASVCVPSVRCGK--AVHAVSNPIA 128
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
S++ K+ LL +VE +A+ DPR+++V+A L+ EYD+I I R DG ADIRP+V+L V
Sbjct: 129 SLDSAAKVALLNKVEALAKAADPRIVQVMAGLTCEYDLIYIARLDGRHSADIRPMVRLNV 188
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVL 508
T+I ++ RRE G++G GGRY+ YF + + + V+++V AL NLE++PAPAG M VVL
Sbjct: 189 TVIAKQGERREQGSAGGGGRYDLAYFDEYCVGQYVASAVKQALTNLESRPAPAGAMTVVL 248
Query: 509 GPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINID 568
G GWPG+LLHEA+GHGLEGDFNRK +SAFS IG+R+A+K +T+VD G +ANRRGS+NID
Sbjct: 249 GSGWPGVLLHEAVGHGLEGDFNRKETSAFSGRIGERVAAKGVTVVDQGDIANRRGSLNID 308
Query: 569 DEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGK 628
DEGN T+ T LIE+GIL GY+QD NARLM + +TGN RRES++ P+PRMTNT+M +G
Sbjct: 309 DEGNETRRTVLIEDGILVGYLQDETNARLMGVPVTGNGRRESYSSAPMPRMTNTFMESGS 368
Query: 629 FHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGP 688
PEEII+S+ GLYA NF GGQVDIT+GKFVFSAS+A+ ++NGK+ YPVKGAT+IG+GP
Sbjct: 369 RDPEEIIASIDKGLYAVNFGGGQVDITSGKFVFSASEAWWVENGKLQYPVKGATIIGNGP 428
Query: 689 NILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS-ITVGGTN 737
+LK VSMIGNDM LD GVGVCGKDGQ VPVGVGQPTL+ID+ +TVGG+
Sbjct: 429 EVLKHVSMIGNDMSLDAGVGVCGKDGQSVPVGVGQPTLRIDAGLTVGGSE 478
>gi|345864200|ref|ZP_08816404.1| protein TldD [endosymbiont of Tevnia jerichonana (vent Tica)]
gi|345124731|gb|EGW54607.1| protein TldD [endosymbiont of Tevnia jerichonana (vent Tica)]
Length = 480
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 267/479 (55%), Positives = 357/479 (74%), Gaps = 7/479 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+ IA +LEP L E+ L ++L + + VD AD YFQ ++ E+W+LE+G++K G +I
Sbjct: 5 IQIANQSILEPAGLAERDLERMLAELSGSGVDAADIYFQSSRLESWVLEDGLIKEGAHNI 64
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QG G+RAISG+KT F YSD++ LINA K+ R+I +G +K LY
Sbjct: 65 SQGAGIRAISGEKTGFAYSDELQFPALINAAKAARAIVR--SGTEGSVKVSSVPVSRQLY 122
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + S++ EKI LL RV+ AR +DPRV +VI +L G +DV+++ +G + AD+R
Sbjct: 123 APINPLPSLSEAEKIDLLRRVDAEARKQDPRVKQVIVSLVGAHDVVMVADLEGRLNADVR 182
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVS---NSVNSALINLEAKP 498
PLV+L V +IVE+ RRE G+SG G R ++ + D E+ + +V AL+NLEA
Sbjct: 183 PLVRLNVHVIVEQGERREQGSSGGGARASFQFLLDE--ERALGYAREAVRQALVNLEAVA 240
Query: 499 APAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL 558
APAG++ VVLGPGWPG+LLHEA+GHGLEGDFNRKG+SAFS +G+++AS T+VD+GTL
Sbjct: 241 APAGVLPVVLGPGWPGVLLHEAVGHGLEGDFNRKGTSAFSGRLGEQVASSCCTVVDDGTL 300
Query: 559 ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPR 618
RRGS++IDDEG +Q T LIENGILKGYMQD NARLM + TGN RRES+AH+P+PR
Sbjct: 301 PGRRGSLSIDDEGVESQNTVLIENGILKGYMQDRHNARLMGVESTGNGRRESYAHLPMPR 360
Query: 619 MTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPV 678
MTNTYML G+ P+EII+SV+ GLYA NF GGQVDIT+G+FVFSAS+AY+I+NGK+T PV
Sbjct: 361 MTNTYMLPGEHDPQEIIASVERGLYAVNFGGGQVDITSGRFVFSASEAYLIENGKVTVPV 420
Query: 679 KGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
KGATLIG+GP + ++SM+GND++LDPG+GVCGK+GQ VPVGVGQPTLK+D +TVGGT
Sbjct: 421 KGATLIGNGPEAMTRISMVGNDLELDPGIGVCGKEGQSVPVGVGQPTLKLDELTVGGTG 479
>gi|408374441|ref|ZP_11172128.1| TldD protein [Alcanivorax hongdengensis A-11-3]
gi|407765716|gb|EKF74166.1| TldD protein [Alcanivorax hongdengensis A-11-3]
Length = 481
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 251/476 (52%), Positives = 349/476 (73%), Gaps = 4/476 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L IAR +LL P L L +L + DYAD YFQ +++E+W+LE+GIV+ +F+
Sbjct: 8 LAIAREMLLAPASLQPSQLEGLLNGQLTGQADYADIYFQHSRHESWVLEDGIVRDASFNT 67
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+G GVR +SGDKT F YSDDI+ TL A + R+I Q G+ + ++ + + + Y
Sbjct: 68 ERGAGVRIVSGDKTGFAYSDDITLKTLQQASGAARAITRQ--GQDRQVR-LASAAVPARY 124
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
D + +K+ LL+ ++++AR DP +++V A+LS DV+L+ +DG + AD+R
Sbjct: 125 QALDPLVGWPADDKVALLQEIDRMARSLDPAIVEVTASLSAVQDVVLVAASDGTLAADVR 184
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDM-ILEKCVSNSVNSALINLEAKPAP 500
PL++ V++I E++GRRE G++G GGR +Y++ +E +V SAL+NLEA+PAP
Sbjct: 185 PLIRCNVSVIAERDGRRERGSAGGGGRVSYDWLRQAGRIEGWTREAVRSALLNLEARPAP 244
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG M VVLGPGWPG+LLHEA+GHGLEGDFNRKG+S F+ +G+++AS T+VD+GTLA+
Sbjct: 245 AGTMPVVLGPGWPGVLLHEAVGHGLEGDFNRKGTSMFARKLGQQVASSLCTVVDDGTLAD 304
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+ +DDEG P+ C TLIE G L GYMQD NARLM ++ TGN RRES+AH+P+PRMT
Sbjct: 305 RRGSLTVDDEGTPSACNTLIEKGKLVGYMQDKTNARLMGVAPTGNGRRESYAHLPMPRMT 364
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYML G+ PEEI++S+ G+YA NF GGQVDIT+G+FVFS S+AY+++ GKI PVKG
Sbjct: 365 NTYMLPGESDPEEIVASLDRGIYAVNFGGGQVDITSGRFVFSTSEAYLVEKGKIVCPVKG 424
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
ATLIG G ++ ++SM+GND+ LD G+GVCGK+GQ VPVGVGQPTL++D++TVGGT
Sbjct: 425 ATLIGSGAEVMSRISMVGNDLALDSGIGVCGKEGQSVPVGVGQPTLRVDALTVGGT 480
>gi|389807429|ref|ZP_10204099.1| putative Zn-dependent protease-like protein [Rhodanobacter
thiooxydans LCS2]
gi|388444052|gb|EIM00173.1| putative Zn-dependent protease-like protein [Rhodanobacter
thiooxydans LCS2]
Length = 479
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 276/476 (57%), Positives = 343/476 (72%), Gaps = 4/476 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+ +A S LL P L L ++ G + +D AD YFQ +++E+W LEEGIVK G+ SI
Sbjct: 5 ITLAESKLLAPGGLATGDLDRVFGQLMGPAIDAADLYFQHSRSESWTLEEGIVKDGSHSI 64
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QGVGVRAISG+KT F YSD+I L+ A K+ R+IA G + + +LY
Sbjct: 65 EQGVGVRAISGEKTGFAYSDEIVLPQLLEASKAARAIARDGQGAGQ---PLALHGARALY 121
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
D + S+ +KI LL V+ AR +DPR+ +VI +L+ D +LI +DG + AD+R
Sbjct: 122 PAIDPVESLPNPDKIALLREVDAYARSRDPRIKQVIVSLAATIDTVLIAASDGTLAADVR 181
Query: 442 PLVQLFVTIIVEKNGRRE-IGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAP 500
PLV++ V +IVE NGRRE + G G + + +V AL+NL++ AP
Sbjct: 182 PLVRINVQVIVEANGRREQGYSGGGGRYGYRELIENGRALRFADEAVRQALVNLDSVDAP 241
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAFS IG+R+A+K +TIVD+GTL
Sbjct: 242 AGQMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFSGRIGQRVAAKGVTIVDDGTLVG 301
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS++IDDEG PT+CTTLIE+GILKGYMQD +NARLM M+ TGN RRESF +P+PRMT
Sbjct: 302 RRGSLSIDDEGTPTECTTLIEDGILKGYMQDKLNARLMGMAPTGNGRRESFTALPMPRMT 361
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYM G+ P EII SVK GLYA NF GGQVDITNGKF FSAS+AY+I++G IT PVKG
Sbjct: 362 NTYMRAGQHDPAEIIRSVKKGLYAPNFGGGQVDITNGKFTFSASEAYLIEDGTITRPVKG 421
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
ATLIG GP++L +VSMIGND+ LD GVG+CGKDGQ VPVGVGQPTLKIDS+TVGGT
Sbjct: 422 ATLIGSGPDVLNRVSMIGNDLALDEGVGICGKDGQSVPVGVGQPTLKIDSMTVGGT 477
>gi|417558885|ref|ZP_12209844.1| Zn-dependent protease [Xylella fastidiosa EB92.1]
gi|338178467|gb|EGO81453.1| Zn-dependent protease [Xylella fastidiosa EB92.1]
Length = 485
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 265/479 (55%), Positives = 348/479 (72%), Gaps = 3/479 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L++A S LL P LD+ + I G + VD+ D YFQ + E+W +E+GIVK G SI
Sbjct: 6 LSVAESRLLLPAGLDDGQIDSIFGTLLGPGVDFGDLYFQHARRESWSIEDGIVKDGTHSI 65
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNI--KKIKINS 379
QGVGVRAISG+KT F YSDDI+++ L+ A + R+I+ ++ + + +
Sbjct: 66 EQGVGVRAISGEKTGFAYSDDINRDALLEAAYAARAISRSPGDGVQGTHAVLRRHGRELC 125
Query: 380 LYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVAD 439
LY D + ++ EKI ++ RV+++ R+ DPRV +V+ NLSG DV+LI R+DG++ AD
Sbjct: 126 LYPALDPVGGMDNAEKIAVMRRVDQLLRVADPRVTQVMVNLSGGVDVVLIARSDGVLAAD 185
Query: 440 IRPLVQLFVTIIVEKNGRRE-IGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKP 498
+RPLV+L V +IVE +GRRE G G F D + E ++ AL+NLEA P
Sbjct: 186 VRPLVRLNVQVIVEGHGRRESGYAGGGGRYGYAELFADGLPEAFAREALRQALVNLEAIP 245
Query: 499 APAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL 558
APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK +S ++ IG+R+AS +TIVD+GTL
Sbjct: 246 APAGVMPVVLGAGWPGVLLHEAVGHGLEGDFNRKATSVYAGRIGERVASPGVTIVDDGTL 305
Query: 559 ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPR 618
RRGS+NIDDEG PTQCTTLIE+G+L GYMQD +NARLM ++ TGN RRESFAH+ +PR
Sbjct: 306 DGRRGSLNIDDEGTPTQCTTLIEDGVLVGYMQDTLNARLMGVASTGNGRRESFAHLTMPR 365
Query: 619 MTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPV 678
MTNTYM G EE+I SVK GLYA NF GGQVDIT+GK+VFSA++AY+I++G++T P+
Sbjct: 366 MTNTYMRAGAHSREEMIRSVKKGLYAVNFGGGQVDITSGKYVFSATEAYLIEDGRVTAPI 425
Query: 679 KGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
KGATLIG+GP +++V MIG+D+ LD GVGVCGKDGQ VPVGVGQP+L ID +TVGGT
Sbjct: 426 KGATLIGNGPETMQRVRMIGDDLALDAGVGVCGKDGQSVPVGVGQPSLLIDGLTVGGTQ 484
>gi|410643183|ref|ZP_11353685.1| TldD protein [Glaciecola chathamensis S18K6]
gi|410137361|dbj|GAC11872.1| TldD protein [Glaciecola chathamensis S18K6]
Length = 480
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 262/479 (54%), Positives = 354/479 (73%), Gaps = 7/479 (1%)
Query: 263 NIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSIN 322
N+ LL +LD L L ++++ D+AD YFQ + +E W+LE+GI+K G++++
Sbjct: 3 NLVEQNLLTAANLDRGHLANALDAIYQHDNDFADLYFQASLHETWVLEDGIIKDGSYNVE 62
Query: 323 QGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYS 382
+GVGVRA+SG+KT F YSDDI+ L+ A ++R+IA + GK K+ +K K+++ Y
Sbjct: 63 RGVGVRAVSGEKTGFAYSDDINPEALMQAATASRNIAG-AGGKHKV-NALKSKKVDAKYH 120
Query: 383 FTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRP 442
+ I + EKI LL V+ R ++ + +V+ ++SG Y+ +LI DG DIRP
Sbjct: 121 ADNPILGMQDEEKIALLRAVDSYIRQQETALSQVVVSISGVYEEVLIAATDGTFCTDIRP 180
Query: 443 LVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDM-----ILEKCVSNSVNSALINLEAK 497
LV+L ++++EK+ RRE G+SG GGRY Y YF + EK +++ A +N+ A
Sbjct: 181 LVRLNCSVLMEKDARRERGSSGAGGRYAYEYFLSQEDGRPLYEKIADEAIHMARVNMRAV 240
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS +G+++AS+ TIVD+GT
Sbjct: 241 AAPAGQMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGASTFSGRMGQQVASEGCTIVDDGT 300
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
LANRRGS+++DDEG P+Q LI++GIL GYMQD +NARLM + TGN RRES+AH+P+P
Sbjct: 301 LANRRGSLSVDDEGTPSQYNVLIKDGILTGYMQDKLNARLMGVKPTGNGRRESYAHLPMP 360
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNTYML G++ PEEIISS+KNG+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T P
Sbjct: 361 RMTNTYMLGGQYAPEEIISSIKNGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTQP 420
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
+KGATLIG+GP ++KVSM+GND+ LD GVGVCGKDGQ VPVGVGQPTLK+D +TVGGT
Sbjct: 421 IKGATLIGNGPEAMQKVSMVGNDLALDKGVGVCGKDGQSVPVGVGQPTLKVDELTVGGT 479
>gi|383316005|ref|YP_005376847.1| putative Zn-dependent protease-like protein [Frateuria aurantia DSM
6220]
gi|379043109|gb|AFC85165.1| putative Zn-dependent protease-like protein [Frateuria aurantia DSM
6220]
Length = 479
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 267/469 (56%), Positives = 349/469 (74%), Gaps = 4/469 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P + L ++ + +D AD YFQ +++E+W LEEGIVK G+ SI QGVGVR
Sbjct: 12 LLTPGGMAANDLERVFNQLMGPGIDAADLYFQHSRSESWHLEEGIVKDGSHSIEQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A++G+KT F YSD+I L+ A ++ R+IA +G + + +++ SLY D +
Sbjct: 72 AMAGEKTGFAYSDEIVLPQLLEATRAARAIARDGHGAGRPLA-VRQTP--SLYPAIDPVD 128
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
S+ EKI LL V+ AR +DPRV +V+ +L+ D +LI +DG + AD+RPLV++ V
Sbjct: 129 SLPNPEKIALLREVDAYARARDPRVKQVMVSLAATVDTVLIAASDGTLAADVRPLVRVNV 188
Query: 449 TIIVEKNGRREIGNSGCGGRYNYN-YFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
+IVE NGRRE G +G GGRY+Y + + +V AL+NLEA APAG M VV
Sbjct: 189 QVIVESNGRREQGYAGGGGRYSYGELLANGRALGFAAEAVRQALVNLEAVDAPAGTMPVV 248
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LGPGWPG++LHEA+GHGLEGDFNRKGSSAF+ IG+++A+K +T+VD+GTL RRGS+++
Sbjct: 249 LGPGWPGVMLHEAVGHGLEGDFNRKGSSAFAGRIGEQVAAKGVTVVDDGTLPGRRGSLSV 308
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PTQCTTLIE+GILKGYMQD +NARLM ++ TGN RRESF H+P+PRMTNTYML G
Sbjct: 309 DDEGTPTQCTTLIEDGILKGYMQDKLNARLMGVTATGNGRRESFTHLPMPRMTNTYMLAG 368
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ PEEI+ S+K GLYA NF GGQVDIT+GKFVFSAS+AY++++GKI PVKGATL+G G
Sbjct: 369 ERDPEEILRSIKRGLYAVNFGGGQVDITSGKFVFSASEAYLVEDGKIVCPVKGATLVGSG 428
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P + ++SMIGND+ LD G+GVCGKDGQ VPVGVGQPTL+ID +TVGGT
Sbjct: 429 PEAMSRISMIGNDLALDEGIGVCGKDGQSVPVGVGQPTLRIDGMTVGGT 477
>gi|399911564|ref|ZP_10779878.1| protease TldD [Halomonas sp. KM-1]
Length = 484
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 261/476 (54%), Positives = 353/476 (74%), Gaps = 3/476 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L+ A ILL P LD + L LG++ VDYAD YFQ + +E+W+LE+G VK +++I
Sbjct: 9 LDTAAEILLHPGGLDVEALDAGLGHVLTPGVDYADLYFQRSWHESWVLEDGEVKEASYNI 68
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+ GVGVRA++G+KT F YS+ I+ + L ++ I +S + + I Y
Sbjct: 69 DGGVGVRAMAGEKTGFAYSNQITADALAETGRTASGIV-RSGASLSLAPRIA-TGAELRY 126
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ D ++ ++ +KI LL++ +++AR DP + +V A+L+G ++V+L+ +DG + AD+R
Sbjct: 127 ATVDPLAGLSAEDKIALLKQADRVARAADPAITQVSASLTGVHEVVLVRASDGTLAADVR 186
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAP 500
PLV+ V++I KNGRRE G++G GGRY + D E+ +V AL+NLEA AP
Sbjct: 187 PLVRFNVSVIAVKNGRRERGSAGGGGRYAMSRLRDDSAAERFAKEAVRQALVNLEAVDAP 246
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG M VVL PGWPGILLHEA+GHGLEGDFNRKGSSAF+ +G+R+A+ +T+VD+ TLA+
Sbjct: 247 AGQMPVVLAPGWPGILLHEAVGHGLEGDFNRKGSSAFAGRLGQRVAAPGVTVVDDATLAD 306
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+++DDEG P Q T LIE+GIL GYMQD +NARLM M TGNARRESFAH+P+PRMT
Sbjct: 307 RRGSMSVDDEGTPGQYTPLIEDGILTGYMQDKLNARLMGMQPTGNARRESFAHMPMPRMT 366
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYML G+ P EII+SV+ G+YA +F GGQVDIT+GKFVFSAS+AY+I++GKIT PVKG
Sbjct: 367 NTYMLAGQDDPAEIIASVRRGIYAVSFGGGQVDITSGKFVFSASEAYLIEDGKITAPVKG 426
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
ATLIG+GP + +VSMIG+D++LD G+GVCGK+GQ VPVGVGQPTLK+D +TVGGT
Sbjct: 427 ATLIGNGPEAMGRVSMIGHDLELDTGIGVCGKEGQGVPVGVGQPTLKLDELTVGGT 482
>gi|296840746|ref|ZP_06863365.2| TldD protein [Neisseria polysaccharea ATCC 43768]
gi|296840056|gb|EFH23994.1| TldD protein [Neisseria polysaccharea ATCC 43768]
Length = 494
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 269/486 (55%), Positives = 359/486 (73%), Gaps = 4/486 (0%)
Query: 253 LISQKNIHPLNIA-RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEE 311
+ +HP A ++ LLE L ++L K L + + VDYAD Y Q T E+W LEE
Sbjct: 9 FLCADTMHPTYSAVQARLLEANRLSPELLAKSLCIIGAHHVDYADIYCQRTAYESWHLEE 68
Query: 312 GIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKN 371
GIVK+G+F INQGVGVRA+SGDKTAF Y+D + +++ + ++ R+I + GK+ K
Sbjct: 69 GIVKSGSFQINQGVGVRAVSGDKTAFAYADSLCIDSINRSARAVRAI-GAAGGKVSA-KM 126
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ + + S +D I+ ++ K+ LL +VE IA+ DPR+++V+A L+ EYD++ I R
Sbjct: 127 PSETRGKPVCSASDPIAGLDSAAKVALLNKVEAIAKAADPRIVQVMAGLTCEYDMVYIAR 186
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
DG ADIRP+V+L VT+I ++ RRE G++G GGRY+ YF + ++ + V ++V AL
Sbjct: 187 LDGKHAADIRPMVRLNVTVIAKQGERREQGSAGGGGRYDLAYFDETLVRQFVDSAVKQAL 246
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
INLE++PAPAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+R+A+K +T
Sbjct: 247 INLESRPAPAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKGTSVFSGRIGERVAAKGVT 306
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD G +A RRGS+NIDDEGN T+ T LIE+GIL GYMQD NARL TGN RRES+
Sbjct: 307 VVDQGDIAGRRGSLNIDDEGNETRRTVLIEDGILVGYMQDETNARLTGTQSTGNGRRESY 366
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A P+PRMTNT+M NG + PEEII+S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++
Sbjct: 367 ASAPMPRMTNTFMENGSYEPEEIIASIDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEG 426
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS- 730
G++ YPVKGAT+IG+GP +LK VSMIGND LD GVGVCGK+GQ VPVGVGQPTL+ID+
Sbjct: 427 GRLQYPVKGATIIGNGPEVLKHVSMIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAG 486
Query: 731 ITVGGT 736
+TVGG+
Sbjct: 487 LTVGGS 492
>gi|397661531|ref|YP_006502231.1| putative protease, modulator of DNA gyrase [Taylorella
equigenitalis ATCC 35865]
gi|394349710|gb|AFN35624.1| putative protease, modulator of DNA gyrase [Taylorella
equigenitalis ATCC 35865]
gi|399114542|emb|CCG17336.1| putative protease, modulator of DNA gyrase [Taylorella
equigenitalis 14/56]
Length = 488
Score = 553 bits (1426), Expect = e-154, Method: Compositional matrix adjust.
Identities = 280/476 (58%), Positives = 363/476 (76%), Gaps = 1/476 (0%)
Query: 261 PLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFS 320
P+ A+ ILL+ + + + K LG + +K +YAD YFQ+T +ENW LEEGIVKTG FS
Sbjct: 10 PIVHAKKILLDDNGISLEDIAKALGLIHSHKTNYADLYFQYTCSENWSLEEGIVKTGGFS 69
Query: 321 INQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSL 380
I+QGVGVRA++ +KTAF YSD++S + L+ + +SIA Q + + I K + L
Sbjct: 70 ISQGVGVRAVAHEKTAFSYSDELSADILLKNADTVKSIATQGSASVYIPKQ-GLVDTQKL 128
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D I+S+ EK+++L +VEK AR P + +V+A L E++V+L+ G + ADI
Sbjct: 129 YAPIDPINSMTSEEKLEILNKVEKYARAMSPEIKQVMAGLGSEFEVVLVASTGGRLEADI 188
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAP 500
RPLV+L +T+I E+NGRRE GNSG GGR+ NYF+D I++ V +V+ ALINLEA+PAP
Sbjct: 189 RPLVRLSLTVIAERNGRRERGNSGGGGRFGLNYFSDEIIKDYVKKAVDEALINLEAQPAP 248
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+++ASK +T++D+GT+ +
Sbjct: 249 AGEMTVVLGSGWPGVLLHEAVGHGLEGDFNRKGTSVFSGRIGEQVASKGVTVIDDGTIPD 308
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+NIDDEGNPTQ LIE+GIL GY+QD NA LMNM ITGNARRES+AH+P+PRMT
Sbjct: 309 RRGSLNIDDEGNPTQRNVLIEDGILCGYLQDTQNASLMNMPITGNARRESYAHLPMPRMT 368
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NT+ML G EEII SVK G+YA NFSGGQVDIT+GKFVFSAS+AY+I+NGKIT P+ G
Sbjct: 369 NTFMLGGTHKHEEIIESVKKGIYAANFSGGQVDITSGKFVFSASEAYLIENGKITSPIVG 428
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
ATLIG G + + KVSMI ++M LD G+G CGKDGQ VPVGVG PT+++D ITVGGT
Sbjct: 429 ATLIGSGIDTMNKVSMIADNMSLDSGIGTCGKDGQSVPVGVGMPTIRVDGITVGGT 484
>gi|386719416|ref|YP_006185742.1| TldD protein [Stenotrophomonas maltophilia D457]
gi|384078978|emb|CCH13573.1| TldD protein, part of proposed TldE/TldD proteolytic complex (PMID
12029038) [Stenotrophomonas maltophilia D457]
Length = 481
Score = 553 bits (1426), Expect = e-154, Method: Compositional matrix adjust.
Identities = 271/477 (56%), Positives = 352/477 (73%), Gaps = 3/477 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L +A+ LL P LD L + G + VD+ D YFQ + E+W +E+GIVK G SI
Sbjct: 6 LTLAQDRLLRPGGLDTAGLERTFGQLLGPGVDFGDLYFQHARRESWSVEDGIVKDGAHSI 65
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QGVGVRAISG+KT F YSDDI + L+ A +S R+I+ + G + +++ + +LY
Sbjct: 66 EQGVGVRAISGEKTGFAYSDDIHADALLAAAQSARAISRE--GGAQTGRSLLRGNARALY 123
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
D I I K+++L+R++ R DPRV +V+ +LSG D +LI R+DG++ AD+R
Sbjct: 124 PALDPIDGIGNEAKVEVLKRLDGYLRAADPRVKQVMVSLSGGVDTVLIARSDGVLAADVR 183
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYN-YFTDMILEKCVSNSVNSALINLEAKPAP 500
PLV+L V +IVE NGRRE G +G GGRY Y F E ++ AL+NL+A PAP
Sbjct: 184 PLVRLNVQVIVEHNGRRESGYAGGGGRYGYEALFASGRPEALAQEALRQALVNLDAVPAP 243
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG+M VVLGPGWPG+LLHEA+GHGLEGDFNRKG+S ++ IG+R+A+ +TIVD+GTL
Sbjct: 244 AGMMPVVLGPGWPGVLLHEAVGHGLEGDFNRKGTSVYAGRIGERVAAPGVTIVDDGTLDG 303
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+NIDDEG+P+QCT LIE+GIL GYMQD +NARLM M+ TGN RRESFAH+ +PRMT
Sbjct: 304 RRGSLNIDDEGHPSQCTPLIEDGILVGYMQDSLNARLMGMAPTGNGRRESFAHLTMPRMT 363
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYM G+ P+E+I SVK GLYA NF GGQVDIT+GK+VFSA++AY+I++G+IT PVKG
Sbjct: 364 NTYMRAGEHDPQEMIRSVKKGLYAVNFGGGQVDITSGKYVFSATEAYLIEDGRITTPVKG 423
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
ATLIG+GP ++KV M+GND+ LD GVG+CGKDGQ VPVGVGQP+L I+ ITVGGT
Sbjct: 424 ATLIGNGPETMQKVRMVGNDLALDEGVGICGKDGQSVPVGVGQPSLLIEGITVGGTQ 480
>gi|410619072|ref|ZP_11329988.1| TldD protein [Glaciecola polaris LMG 21857]
gi|410161391|dbj|GAC34126.1| TldD protein [Glaciecola polaris LMG 21857]
Length = 489
Score = 553 bits (1425), Expect = e-154, Method: Compositional matrix adjust.
Identities = 262/479 (54%), Positives = 356/479 (74%), Gaps = 7/479 (1%)
Query: 263 NIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSIN 322
N+ LL +L+ + L L ++++ D+AD YFQ +++E W+LE+GI+K G++++
Sbjct: 12 NLVEQNLLTASNLNRENLASALDAIYQHDNDFADLYFQASQHETWVLEDGIIKDGSYNVE 71
Query: 323 QGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYS 382
+GVGVRA+SG+KT F YSDDI+ L+ A K++R+IA GK K+ +K IKI Y
Sbjct: 72 RGVGVRAVSGEKTGFAYSDDINPEALMQAAKASRNIAC-VGGKHKV-SGLKSIKIEPRYH 129
Query: 383 FTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRP 442
+ I ++ EKI LL V+ R ++ + +V+ ++SG Y+ +LI DG DIRP
Sbjct: 130 ADNPILAMQDEEKIALLRAVDSYIRKQEKALSQVVVSISGVYEEVLIAATDGTFCTDIRP 189
Query: 443 LVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDM-----ILEKCVSNSVNSALINLEAK 497
LV+L ++++EK+GRRE G+SG GGRY Y YF + E+ +++ A +N+ A
Sbjct: 190 LVRLNCSVLMEKDGRRERGSSGAGGRYAYEYFMSQEDSRPLYEQIADEAIHMARVNMRAV 249
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS +G+++AS TIVD+GT
Sbjct: 250 AAPAGQMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGASTFSGRMGQQVASLGCTIVDDGT 309
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
LANRRGS+++DDEG P+Q LI++GIL GYMQD +NARLM + TGN RRES+AH+P+P
Sbjct: 310 LANRRGSMSVDDEGTPSQYNVLIKDGILTGYMQDKLNARLMGVKPTGNGRRESYAHLPMP 369
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNTYML G++ PEEIIS++KNG+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T P
Sbjct: 370 RMTNTYMLGGQYEPEEIISTIKNGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTKP 429
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
+KGATLIG+GP ++KVSM+GND+ LD GVGVCGKDGQ +PVGVGQPTLK+D +TVGGT
Sbjct: 430 IKGATLIGNGPEAMQKVSMVGNDLALDKGVGVCGKDGQSIPVGVGQPTLKVDELTVGGT 488
>gi|254522574|ref|ZP_05134629.1| CsrA activity inhibitor TldD [Stenotrophomonas sp. SKA14]
gi|219720165|gb|EED38690.1| CsrA activity inhibitor TldD [Stenotrophomonas sp. SKA14]
Length = 481
Score = 553 bits (1425), Expect = e-154, Method: Compositional matrix adjust.
Identities = 268/477 (56%), Positives = 347/477 (72%), Gaps = 3/477 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L +A+ LL P LD L + G + VD+ D YFQ + E+W +E+GIVK G SI
Sbjct: 6 LTLAQDRLLRPGGLDTAGLERTFGQLLGPGVDFGDLYFQHARRESWSVEDGIVKDGAHSI 65
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QGVGVRAISG+KT F YSDDI + L A +S R+I+ + G + +++ + +LY
Sbjct: 66 EQGVGVRAISGEKTGFAYSDDIHADALRVAAQSARAISRE--GGAQSGRSLLRGNARALY 123
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
D I I K+++L+R++ R DPRV +V+ +LSG D +LI R+DG++ AD+R
Sbjct: 124 PALDPIDGIGNEAKVEVLKRLDGYLRAADPRVKQVMVSLSGGVDTVLIARSDGVLGADVR 183
Query: 442 PLVQLFVTIIVEKNGRRE-IGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAP 500
PLV+L V +IVE NGRRE G G F D E ++ AL+NLEA PAP
Sbjct: 184 PLVRLNVQVIVEHNGRRESGYAGGGGRYGYEELFADGRPEAFAREALRQALVNLEAVPAP 243
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG+M VVLGPGWPG+LLHEA+GHGLEGDFNRKG+S ++ IG+R+A+ +TIVD+GTL
Sbjct: 244 AGVMPVVLGPGWPGVLLHEAVGHGLEGDFNRKGTSVYAGRIGERVAAPGVTIVDDGTLEG 303
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+NIDDEG+P+QCTTLIE+GIL GYMQD +NARLM ++ TGN RRESFAH+ +PRMT
Sbjct: 304 RRGSLNIDDEGHPSQCTTLIEDGILVGYMQDSLNARLMGVAPTGNGRRESFAHLTMPRMT 363
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYM G+ P+E+I SVK GLYA NF GGQVDIT+GK+VFSA++AY+I++G+IT PVKG
Sbjct: 364 NTYMRAGQHDPQEMIRSVKKGLYAVNFGGGQVDITSGKYVFSATEAYLIEDGRITTPVKG 423
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
ATLIG+GP ++KV M+GND+ LD GVG+CGKDGQ VPVGVGQP+L I+ ITVGGT
Sbjct: 424 ATLIGNGPETMQKVRMVGNDLALDEGVGICGKDGQSVPVGVGQPSLLIEGITVGGTQ 480
>gi|422021713|ref|ZP_16368223.1| protease TldD [Providencia sneebia DSM 19967]
gi|414098310|gb|EKT59959.1| protease TldD [Providencia sneebia DSM 19967]
Length = 481
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/474 (56%), Positives = 354/474 (74%), Gaps = 9/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL LD + L LG + + K+DYAD +FQ + +E+W+LE+ I+K G+++I+QGVGVR
Sbjct: 10 LLAANGLDHQKLYDTLGLLSERKLDYADLFFQSSYHESWVLEDRIIKNGSYNIDQGVGVR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSI-ANQSNGKIKIIKNIKKIKINSLYSFTDTI 387
A++G+KT F Y+D +S L ++ + RSI ++Q NG+ +I+ + K LY TD +
Sbjct: 70 AVTGEKTGFAYADQVSLKALQDSAIAARSIVSDQGNGQSQILTEVDYKK---LYPETDPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S++ +KI LL RV+++AR +DPRVI+V A+L+ Y+ IL+ DG + ADIRPLV+L
Sbjct: 127 YSLSREDKIALLHRVDQVARAQDPRVIEVNASLTAVYEQILVAATDGTLAADIRPLVRLS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEAKPAPAG 502
V+++VE G+RE G SG G RY Y YF +++ E+ +V ALINL A PAPAG
Sbjct: 187 VSVLVEHEGKRERGASGGGARYGYEYFLEVHQGEILAEQYAKEAVRMALINLSAIPAPAG 246
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
+M VVLG GWPG+LLHEA+GHGLEGDFNR+GSS FS +G +AS T+VD+GT+ RR
Sbjct: 247 MMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGSSVFSGKVGNLVASPLCTVVDDGTITGRR 306
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+ IDDEG P Q LIENGILK Y+QD +NARLM + TGNARRES+AH+P+PRMTNT
Sbjct: 307 GSLAIDDEGVPGQYNVLIENGILKNYIQDKLNARLMGVVPTGNARRESYAHLPMPRMTNT 366
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
Y+L G+ PE+II+SV G+YA NF GGQVDIT+GKFVFS S+AY+I++GKIT PVKGAT
Sbjct: 367 YLLAGESTPEDIIASVDKGIYAPNFGGGQVDITSGKFVFSTSEAYLIEDGKITSPVKGAT 426
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
LIG G ++++SM+GND+ LD GVGVCGKDGQ VPVGVGQPTLK+D +TVGGT
Sbjct: 427 LIGSGIEAMQQISMVGNDLALDKGVGVCGKDGQSVPVGVGQPTLKLDKMTVGGT 480
>gi|338997027|ref|ZP_08635732.1| protease TldD [Halomonas sp. TD01]
gi|338766100|gb|EGP21027.1| protease TldD [Halomonas sp. TD01]
Length = 484
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 264/477 (55%), Positives = 354/477 (74%), Gaps = 3/477 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N A SILL P LD L L +DYAD YFQ T E W+LE+G VK +++I
Sbjct: 8 VNTAVSILLTPGGLDLDALDTGLSYAMGGGIDYADLYFQRTWQEGWVLEDGEVKEASYNI 67
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+ GVGVR+++G+KT F YS+ I+ + L++ ++ I +GK + + + S Y
Sbjct: 68 DGGVGVRSLAGEKTGFAYSNQITADALMDTGRTAAGIVR--SGKQLPGQPVVAVSAASRY 125
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ D ++ ++ EK+ +L++ ++IAR DP + +V A+LSG Y+V+L+ +DG + ADIR
Sbjct: 126 AGLDPLAGLSADEKVAMLKQADRIARAADPCISQVSASLSGTYEVVLVRASDGTLAADIR 185
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDM-ILEKCVSNSVNSALINLEAKPAP 500
PLV+ V++I KNGRRE G++G GGRY+ + D + E+ +V AL+NLEA AP
Sbjct: 186 PLVRFNVSVIAAKNGRRERGSAGGGGRYSMSRLRDENVAERYAKEAVRQALVNLEAVDAP 245
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG M VVLG GWPGILLHEA+GHGLEGDFNRKGSSAF+ +GKR+A+K +T+VD+ T+A+
Sbjct: 246 AGQMPVVLGAGWPGILLHEAVGHGLEGDFNRKGSSAFAGRMGKRVAAKGVTVVDDATVAD 305
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RGS+++DDEG P Q T LIE+GIL GYMQD +NARLMNM+ TGNARRESFAH+P+PRMT
Sbjct: 306 CRGSLSVDDEGTPGQYTPLIEDGILTGYMQDKLNARLMNMAPTGNARRESFAHLPMPRMT 365
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NT ML G+ P +II SVK G+YA +F GGQVDIT+GKFVFSAS+AY+I++GKIT PVKG
Sbjct: 366 NTVMLAGQDEPADIIKSVKRGIYAVSFGGGQVDITSGKFVFSASEAYLIEDGKITAPVKG 425
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
ATLIG+GP + +VSMIG+DM++D G+GVCGK+GQ VPVGVGQPTLK+D +TVGGT
Sbjct: 426 ATLIGNGPEAMGRVSMIGHDMEMDTGIGVCGKEGQGVPVGVGQPTLKLDELTVGGTQ 482
>gi|377555681|ref|ZP_09785409.1| peptidase U62, modulator of DNA gyrase [endosymbiont of
Bathymodiolus sp.]
Length = 472
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 270/471 (57%), Positives = 356/471 (75%), Gaps = 6/471 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL +L++ + +L ++F DYAD YFQ + E+W LEEGIVK+G +SI+ GVG R
Sbjct: 5 LLNENNLNQDKIEGLLSDLFAKGTDYADLYFQHSIAESWFLEEGIVKSGTYSISHGVGTR 64
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSLYSFTDTI 387
A+ G++T F YSDD++ + + AV + I+ NQ+ KI+ +++I + + Y+ +
Sbjct: 65 AVKGEQTGFAYSDDLNIDAIQKAVDFAKGISKNQAPQKIQTLQSIPHV---AKYNGMSPL 121
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S++ EK+ LL+R++ IAR ++P+V +V A+LSG Y +LI DG+ D RP+V++
Sbjct: 122 ESLSSAEKVDLLKRIDSIAR-QEPKVKQVSASLSGAYTEVLIVSTDGVYQKDYRPMVRIS 180
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYFTDM-ILEKCVSNSVNSALINLEAKPAPAGIMKV 506
V++IVE NGR E +SG GGRY+Y YF D E ++ AL+ LEA+ APAG + V
Sbjct: 181 VSVIVEHNGRIESASSGGGGRYDYRYFIDHNFAEVYAQEAIRQALVALEAQDAPAGKLPV 240
Query: 507 VLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSIN 566
+LGPGWPG+LLHEAIGHGLEGDFNRKG+S F+ IG+++AS++ TIVDNGTLANRRGS+
Sbjct: 241 ILGPGWPGVLLHEAIGHGLEGDFNRKGTSVFTGKIGEQVASEKCTIVDNGTLANRRGSLT 300
Query: 567 IDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLN 626
+DDEG TQ TTLIENGILKGYM D MNA+LM + TGN RRES+AHIP+PRMTNTYMLN
Sbjct: 301 VDDEGTQTQNTTLIENGILKGYMFDKMNAKLMGVEPTGNGRRESYAHIPMPRMTNTYMLN 360
Query: 627 GKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGH 686
G+ E++I+SV +GLYA NF GGQVDIT+GKFVFSA++AY+IKNGKI++PVKGATLIG
Sbjct: 361 GEDTLEQMIASVDDGLYAVNFDGGQVDITSGKFVFSANEAYLIKNGKISHPVKGATLIGS 420
Query: 687 GPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
G LKK+SM+ ND+KLD GVGVCGKDGQ VPVGVGQP+LKID +TVGGT
Sbjct: 421 GDEALKKISMVANDLKLDSGVGVCGKDGQSVPVGVGQPSLKIDELTVGGTQ 471
>gi|53802438|ref|YP_112913.1| tldD protein [Methylococcus capsulatus str. Bath]
gi|53756199|gb|AAU90490.1| tldD protein [Methylococcus capsulatus str. Bath]
Length = 481
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 270/476 (56%), Positives = 346/476 (72%), Gaps = 5/476 (1%)
Query: 264 IARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQ 323
IA +LEP L + + K++ + + +D AD Y Q + E+W LE+GIVK G++ I Q
Sbjct: 8 IAERAILEPCGLIPQDIEKVVARLAGSDIDDADVYLQSSHYESWSLEDGIVKEGSYGIEQ 67
Query: 324 GVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSF 383
G G+RA+SG+KT F YSD+++ L+ A + RSIA + ++ + LY+
Sbjct: 68 GAGLRAVSGEKTGFAYSDELALPVLLEAAGNARSIARGGQAGRIAVSGVQPVP--RLYAP 125
Query: 384 TDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPL 443
D ++S+ KI LL ++ AR DPRV +V +LSG Y +LI DG + D+RPL
Sbjct: 126 VDPLASLPAEAKIDLLRSLDAEARRADPRVEQVFVSLSGGYSSVLIFGLDGAMHGDVRPL 185
Query: 444 VQLFVTIIVEKNGRREIGNSGCGGRYNYNYF--TDMILEKCVSNSVNSALINLEAKPAPA 501
V+L V++IVE GRRE G++G GGR +Y +F D L +V AL+NLEA APA
Sbjct: 186 VRLNVSVIVEAGGRREQGSAGGGGRTDYGFFFERDRAL-GYAREAVRQALVNLEAGDAPA 244
Query: 502 GIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANR 561
G M VVLGPGWPGILLHEAIGHGLEGDFNRKG+SAFS +G+R+AS T+VD+GTL NR
Sbjct: 245 GTMTVVLGPGWPGILLHEAIGHGLEGDFNRKGTSAFSGRVGERVASPLCTVVDDGTLPNR 304
Query: 562 RGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTN 621
RGS++IDDEG PT+ T LIE+GILKGYMQD +NARLM + TGN RRES+ +P+PRMTN
Sbjct: 305 RGSLSIDDEGTPTRRTVLIEDGILKGYMQDRLNARLMGAAPTGNGRRESYQCLPMPRMTN 364
Query: 622 TYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGA 681
TYML G+ PEEII+SV GLYA NF GGQVDIT+GKFVFSAS+AY+I+ G+IT PV+GA
Sbjct: 365 TYMLPGEHAPEEIIASVAKGLYARNFGGGQVDITSGKFVFSASEAYLIEGGRITRPVRGA 424
Query: 682 TLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
TLIG+GP++L +VSM+GND++LDPGVG CGKDGQ VPVGVGQPTLKID +TVGGT
Sbjct: 425 TLIGNGPDVLTRVSMVGNDLELDPGVGTCGKDGQSVPVGVGQPTLKIDGLTVGGTR 480
>gi|28198334|ref|NP_778648.1| TldD protein [Xylella fastidiosa Temecula1]
gi|182680974|ref|YP_001829134.1| peptidase U62 modulator of DNA gyrase [Xylella fastidiosa M23]
gi|386084494|ref|YP_006000776.1| peptidase U62 modulator of DNA gyrase [Xylella fastidiosa subsp.
fastidiosa GB514]
gi|28056404|gb|AAO28297.1| TldD protein [Xylella fastidiosa Temecula1]
gi|182631084|gb|ACB91860.1| peptidase U62 modulator of DNA gyrase [Xylella fastidiosa M23]
gi|307579441|gb|ADN63410.1| peptidase U62 modulator of DNA gyrase [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 485
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 265/479 (55%), Positives = 347/479 (72%), Gaps = 3/479 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L++A S LL P LD+ + I G + VD+ D YFQ + E+W +E+GIVK G SI
Sbjct: 6 LSVAESRLLLPAGLDDGQIDSIFGTLLGPGVDFGDLYFQHARRESWSIEDGIVKDGTHSI 65
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNI--KKIKINS 379
QGVGVRAISG+KT F YSDDI+++ L+ A + R+I+ ++ + + +
Sbjct: 66 EQGVGVRAISGEKTGFAYSDDINRDALLEAAYAARAISRSPGDGVQGTHAVLRRHGRELC 125
Query: 380 LYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVAD 439
LY D + ++ EKI ++ RV+++ R+ DPRV +V+ NLSG DV+LI R+DG++ AD
Sbjct: 126 LYPALDPVGGMDNAEKIAVMRRVDQLLRVADPRVTQVMVNLSGGVDVVLIARSDGVLAAD 185
Query: 440 IRPLVQLFVTIIVEKNGRRE-IGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKP 498
+RPLV+L V +IVE +GRRE G G F D E ++ AL+NLEA P
Sbjct: 186 VRPLVRLNVQVIVEGHGRRESGYAGGGGRYGYAELFADGRPEAFAREALRQALVNLEAIP 245
Query: 499 APAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL 558
APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK +S ++ IG+R+AS +TIVD+GTL
Sbjct: 246 APAGVMPVVLGAGWPGVLLHEAVGHGLEGDFNRKATSVYAGRIGERVASPGVTIVDDGTL 305
Query: 559 ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPR 618
RRGS+NIDDEG PTQCTTLIE+G+L GYMQD +NARLM ++ TGN RRESFAH+ +PR
Sbjct: 306 DGRRGSLNIDDEGTPTQCTTLIEDGVLVGYMQDTLNARLMGVASTGNGRRESFAHLTMPR 365
Query: 619 MTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPV 678
MTNTYM G EE+I SVK GLYA NF GGQVDIT+GK+VFSA++AY+I++G++T P+
Sbjct: 366 MTNTYMRAGAHSREEMIRSVKKGLYAVNFGGGQVDITSGKYVFSATEAYLIEDGRVTAPI 425
Query: 679 KGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
KGATLIG+GP +++V MIG+D+ LD GVGVCGKDGQ VPVGVGQP+L ID +TVGGT
Sbjct: 426 KGATLIGNGPETMQRVRMIGDDLALDAGVGVCGKDGQSVPVGVGQPSLLIDGLTVGGTQ 484
>gi|385329315|ref|YP_005883618.1| tldD protein [Neisseria meningitidis alpha710]
gi|308390166|gb|ADO32486.1| tldD protein [Neisseria meningitidis alpha710]
Length = 494
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/486 (55%), Positives = 358/486 (73%), Gaps = 4/486 (0%)
Query: 253 LISQKNIHPLNIA-RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEE 311
+ +HP A ++ LLE L ++L K L + + VDYAD Y Q T E+W LEE
Sbjct: 9 FLCADTMHPTYSAVQARLLEANRLSPELLAKSLCIIGAHHVDYADIYCQRTAYESWHLEE 68
Query: 312 GIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKN 371
GIVK+G+F INQGVGVRA+SGDKTAF Y+D + +++ + ++ R+I + GK+ K
Sbjct: 69 GIVKSGSFQINQGVGVRAVSGDKTAFAYADSLCIDSINRSARAVRAI-GAAGGKVSA-KM 126
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ + + S +D I+ ++ K+ LL +VE IA+ DPR+++V+A L+ EYD++ + R
Sbjct: 127 PSETRGKPVCSASDPIAGLDSAAKVALLNKVEAIAKAADPRIVQVMAGLTCEYDMVYLAR 186
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
DG ADIRP+V+L VT+I ++ RRE G++G GGRY+ YF + ++ + V +V AL
Sbjct: 187 LDGKHAADIRPMVRLNVTVIAKQGERREQGSAGGGGRYDLAYFDENLVHRFVDAAVKQAL 246
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
NLE++PAPAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+R+A+K +T
Sbjct: 247 TNLESRPAPAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKGTSVFSGRIGERVAAKGVT 306
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD G +A RRGS+NIDDEGN T+ T LIE+GIL GYMQD NARLM TGN RRES+
Sbjct: 307 VVDQGDIAGRRGSLNIDDEGNETRRTVLIEDGILVGYMQDETNARLMGTQSTGNGRRESY 366
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A P+PRMTNT+M NG + PEEII+S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++
Sbjct: 367 ASAPMPRMTNTFMENGGYEPEEIIASIDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEG 426
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS- 730
GK+ YPVKGAT+IG+GP +LK VSMIGND LD GVGVCGK+GQ VPVGVGQPTL+ID+
Sbjct: 427 GKLQYPVKGATIIGNGPEVLKHVSMIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAG 486
Query: 731 ITVGGT 736
+TVGG+
Sbjct: 487 LTVGGS 492
>gi|15837729|ref|NP_298417.1| TldD protein [Xylella fastidiosa 9a5c]
gi|9106089|gb|AAF83937.1|AE003949_1 TldD protein [Xylella fastidiosa 9a5c]
Length = 485
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 266/479 (55%), Positives = 347/479 (72%), Gaps = 3/479 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L++A S LL P LD+ + I G + VD+ D YFQ + E+W +E+GIVK G SI
Sbjct: 6 LSVAESRLLLPSGLDDDQIDSIFGTLLGPGVDFGDLYFQHARRESWSIEDGIVKDGTHSI 65
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNI--KKIKINS 379
QGVGVRAISG+KT F YSDDI+++ L+ A + R+I+ ++ + + +
Sbjct: 66 EQGVGVRAISGEKTGFAYSDDINRDALLEAAYAARAISRSPGDGVQGTHAVLLHQERELC 125
Query: 380 LYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVAD 439
LY D + ++ EKI ++ RV+++ R DPRV +V+ NLSG DV+LI R+DG++ AD
Sbjct: 126 LYPALDPVGGMDNAEKIAVMRRVDQLLRAADPRVTQVMVNLSGGVDVVLIARSDGVLAAD 185
Query: 440 IRPLVQLFVTIIVEKNGRRE-IGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKP 498
+RPLV+L V +IVE +GRRE G G F D E ++ AL+NLEA P
Sbjct: 186 VRPLVRLNVQVIVEGHGRRESGYAGGGGRYGYAELFADGRPEAFAREALRQALVNLEAIP 245
Query: 499 APAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL 558
APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S ++ IG+R+AS +TIVD+GTL
Sbjct: 246 APAGVMPVVLGAGWPGVLLHEAVGHGLEGDFNRKGTSVYAGRIGERVASPGVTIVDDGTL 305
Query: 559 ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPR 618
RRGS+NIDDEG PTQCTTLIE+G+L GYMQD +NARLM ++ TGN RRESFAH+ +PR
Sbjct: 306 DGRRGSLNIDDEGTPTQCTTLIEDGVLVGYMQDTLNARLMGVASTGNGRRESFAHLTMPR 365
Query: 619 MTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPV 678
MTNTYM G EE+I SVK GLYA NF GGQVDIT+GK+VFSA++AY+I++G++T P+
Sbjct: 366 MTNTYMRAGVHSREEMIRSVKKGLYAVNFGGGQVDITSGKYVFSATEAYLIEDGRVTAPI 425
Query: 679 KGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
KGATLIG+GP +++V MIG+D+ LD GVGVCGKDGQ VPVGVGQP+L ID +TVGGT
Sbjct: 426 KGATLIGNGPETMQRVRMIGDDLALDAGVGVCGKDGQSVPVGVGQPSLLIDGLTVGGTQ 484
>gi|85713044|ref|ZP_01044081.1| Predicted Zn-dependent protease [Idiomarina baltica OS145]
gi|85693147|gb|EAQ31108.1| Predicted Zn-dependent protease [Idiomarina baltica OS145]
Length = 478
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 260/466 (55%), Positives = 344/466 (73%), Gaps = 7/466 (1%)
Query: 277 EKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTA 336
E L + LG ++ +D+AD YFQ + NE+W+LE+GI+K G + G+GVRAI G+KT
Sbjct: 15 ESDLARALGTLYNGDIDFADIYFQGSVNESWVLEDGIIKDGAYHNETGMGVRAIQGEKTG 74
Query: 337 FFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKI 396
F Y+D+I++ L + R I Q G+ K +K K + + Y+ + + S+ EKI
Sbjct: 75 FAYADEITQQALTQTCNAARGIVRQ--GQSKQVKAWTKQSVAAQYAAKNPLQSLEEAEKI 132
Query: 397 KLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNG 456
LL++V+ AR +D RV +V+ +LSG YD +L+ DG D RPLV+L ++IVE+ G
Sbjct: 133 ALLKQVDAHARAQDKRVSQVVVSLSGSYDDVLVAATDGTFAEDHRPLVRLNCSVIVEQEG 192
Query: 457 RREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPG 511
RRE G++G G R +Y YF + +V AL+NLEA APAG M VVLG G
Sbjct: 193 RRERGSAGGGARVSYEYFFKDEEGTPRWKAFAEEAVRQALVNLEAIAAPAGTMPVVLGAG 252
Query: 512 WPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEG 571
WPG+LLHEA+GHGLEGDFNRKGSSA++ IG+++AS+ TIVD+GTLA+RRGS++IDDEG
Sbjct: 253 WPGVLLHEAVGHGLEGDFNRKGSSAYAGKIGEKVASELCTIVDDGTLADRRGSLSIDDEG 312
Query: 572 NPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHP 631
P LIENGILKGYMQD MNARLM ++TGN RRES+AH+P+PRMTNTYML G+ P
Sbjct: 313 TPAGRNVLIENGILKGYMQDKMNARLMGHAVTGNGRRESYAHLPMPRMTNTYMLPGEHQP 372
Query: 632 EEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNIL 691
E+II+SVK G+YA +F+GGQVDIT+G+FVFSAS+AY+I++GKIT P+KGATLIG+GP +
Sbjct: 373 EDIIASVKRGIYAPHFAGGQVDITSGQFVFSASEAYLIEDGKITQPIKGATLIGNGPEAM 432
Query: 692 KKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
KVSM+GND+ LD GVGVCGKDGQ +PVGVGQPTLK+D++TVGGT+
Sbjct: 433 SKVSMVGNDLALDQGVGVCGKDGQSLPVGVGQPTLKLDAMTVGGTD 478
>gi|344338213|ref|ZP_08769146.1| peptidase U62 modulator of DNA gyrase [Thiocapsa marina 5811]
gi|343802267|gb|EGV20208.1| peptidase U62 modulator of DNA gyrase [Thiocapsa marina 5811]
Length = 481
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 276/480 (57%), Positives = 361/480 (75%), Gaps = 7/480 (1%)
Query: 261 PLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFS 320
P+ IAR+ +LEP L E+ L ++LG + + VD AD YFQ ++ E+W+LE+GI+K GNFS
Sbjct: 5 PIAIARTSILEPAGLTEQDLDRLLGLLAGSAVDAADIYFQSSRLESWVLEDGIIKDGNFS 64
Query: 321 INQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSL 380
I QG G+RAISG+KT F YSD++ L A ++ R+IA G+ I + + SL
Sbjct: 65 IEQGAGLRAISGEKTGFAYSDELRFPALAQAAEAARAIARIGQGEQVRIGEVANKR--SL 122
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y T+ I+S+ +KI LL+RV+ AR DPRV +V+A++ D +L+ +DG + AD+
Sbjct: 123 YDPTNPIASLPDPDKIALLQRVDAEARRADPRVREVVASVVAVQDTVLVLGDDGALSADV 182
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVS---NSVNSALINLEAK 497
RPLV+L V+++ E GRRE G+SG G R + +YF ++ ++ +S +V A+ NLEA
Sbjct: 183 RPLVRLNVSVVAEDGGRREQGSSGGGARADLDYF--LLEDRAMSFAREAVRLAVTNLEAG 240
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
APAG M VVLG GWPG+LLHEAIGHGLEGDFNRKGSSAF+ IG+R+A+ +T+VD+GT
Sbjct: 241 DAPAGTMTVVLGSGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRIGERVAAPGVTVVDDGT 300
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
L RRGS+NIDDEG TQ T LIE+GIL GYMQD +NARL TGN RRES+AH+P+P
Sbjct: 301 LPGRRGSLNIDDEGTMTQNTVLIEDGILCGYMQDKLNARLTGTHSTGNGRRESYAHLPMP 360
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNTYML G+ PEEII+SV GLYA NF GGQVDIT+GKFVFSAS+AY+I+NGK+ P
Sbjct: 361 RMTNTYMLAGERDPEEIIASVDKGLYAVNFGGGQVDITSGKFVFSASEAYLIENGKVGRP 420
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
VKGATLIG+GP++L +VSMIGND++LD GVG CGK+GQ VPVGVGQPTL+ID++TVGGT+
Sbjct: 421 VKGATLIGNGPDVLTRVSMIGNDLRLDQGVGTCGKEGQSVPVGVGQPTLRIDALTVGGTS 480
>gi|417958447|ref|ZP_12601361.1| TldD protein [Neisseria weaveri ATCC 51223]
gi|343966661|gb|EGV34914.1| TldD protein [Neisseria weaveri ATCC 51223]
Length = 479
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 263/470 (55%), Positives = 357/470 (75%), Gaps = 3/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL+ L + L K L + +KVDYAD Y Q T E+W LEEGIVK+G+F I+QGVGVR
Sbjct: 11 LLDANQLSPERLAKSLALIGSHKVDYADIYCQRTAFESWHLEEGIVKSGSFQIDQGVGVR 70
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+ G+KTAF Y+D ++ +++ + ++ R+I + +++ K ++++ ++ I+
Sbjct: 71 AVVGEKTAFAYADSLNADSVDRSAQAVRAIGLAGQAASVCVPSVRCGK--AVHAVSNPIA 128
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
S++ K+ LL +VE +A+ DPR+++V+A L+ EYD+I I R DG ADIRP+V+L V
Sbjct: 129 SLDSAAKVALLNKVEALAKAADPRIVQVMAGLTCEYDLIYIARLDGRHSADIRPMVRLNV 188
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVL 508
T+I ++ RRE G++G GGRY+ YF + + + V+++V AL NLE++PAPAG M VVL
Sbjct: 189 TVIAKQGERREQGSAGGGGRYDLAYFDEYCVGQYVASAVKQALTNLESRPAPAGAMTVVL 248
Query: 509 GPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINID 568
G GWPG+LLHEA+GHGLEGDFNRK +SAFS IG+R+A+K +T+VD G +ANRRGS+NID
Sbjct: 249 GSGWPGVLLHEAVGHGLEGDFNRKETSAFSGRIGERVAAKGVTVVDQGDIANRRGSLNID 308
Query: 569 DEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGK 628
DEGN T+ T LIE+GIL GY+QD NARLM + +TGN RRES++ P+PRMTNT+M +G
Sbjct: 309 DEGNETRRTVLIEDGILVGYLQDETNARLMGVPVTGNGRRESYSSAPMPRMTNTFMESGS 368
Query: 629 FHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGP 688
PEEII+S+ GLYA NF GGQVDIT+GKFVFSAS+A+ ++NGK+ YPVKGAT+IG+GP
Sbjct: 369 RDPEEIIASIDKGLYAVNFGGGQVDITSGKFVFSASEAWWVENGKLQYPVKGATIIGNGP 428
Query: 689 NILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS-ITVGGTN 737
+LK VSMIGNDM LD GVGVCGKDGQ VPVGVGQPTL+ID+ +TVGG+
Sbjct: 429 EVLKHVSMIGNDMSLDAGVGVCGKDGQSVPVGVGQPTLRIDAGLTVGGSE 478
>gi|431931912|ref|YP_007244958.1| Zn-dependent protease-like protein [Thioflavicoccus mobilis 8321]
gi|431830215|gb|AGA91328.1| putative Zn-dependent protease-like protein [Thioflavicoccus
mobilis 8321]
Length = 480
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/481 (55%), Positives = 348/481 (72%), Gaps = 9/481 (1%)
Query: 261 PLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFS 320
P++IAR +LEP L + L ++ G + +D AD YFQ ++ E+W+LE+GI+K G+F+
Sbjct: 4 PISIARQGILEPAGLTDGDLDRLCGALRTPSIDAADIYFQTSRLESWVLEDGIIKDGSFN 63
Query: 321 INQGVGVRAISGDKTAFFYSDDISKNTL-INAVKSTRSIANQSNGKIKIIKNIKKIKI-N 378
I QG G RA+SG+KT F YSD++ L A + G++++ + + +
Sbjct: 64 IEQGAGFRAVSGEKTGFAYSDELHLPALEQAAQAARAIARGGHQGRVRV----DTLPVPH 119
Query: 379 SLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVA 438
LY I S+ EK+ LL+RV+ AR DPRV +V+ +L D +LI +DG + A
Sbjct: 120 RLYEPLSPIESLTNEEKVALLQRVDAEARRLDPRVREVVTSLVAAQDTVLIIADDGTLAA 179
Query: 439 DIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF--TDMILEKCVSNSVNSALINLEA 496
D+RPLV+L V+II E+NGRRE G SG G R YF D+ +E +V AL NLEA
Sbjct: 180 DVRPLVRLNVSIIAEENGRREQGTSGGGARAELGYFLAADLAVE-LAREAVRQALTNLEA 238
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKG+SAF+ +G+R+A+ +T+VD+G
Sbjct: 239 GEAPAGTMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGTSAFAGRLGQRVAAPGVTVVDDG 298
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL RRGS+NIDDEG PTQ T LIE+GIL+GYMQD +NARLM ++ TGN RRES+AH+P+
Sbjct: 299 TLPGRRGSLNIDDEGTPTQSTVLIEDGILRGYMQDKLNARLMGLAPTGNGRRESYAHLPM 358
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G P EII+SV+ GLYA NF GGQVDIT+GKFVFSAS+AY+I+ G+I
Sbjct: 359 PRMTNTYMLAGDKDPAEIIASVERGLYAANFGGGQVDITSGKFVFSASEAYLIEGGRIGR 418
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG+GP++L +V MIGND+ LD GVG CGK+GQ VPVGVGQPTL+ID +TVGGT
Sbjct: 419 PVKGATLIGNGPDVLTRVGMIGNDLALDRGVGTCGKEGQSVPVGVGQPTLRIDGLTVGGT 478
Query: 737 N 737
N
Sbjct: 479 N 479
>gi|410626680|ref|ZP_11337433.1| TldD protein [Glaciecola mesophila KMM 241]
gi|410153781|dbj|GAC24202.1| TldD protein [Glaciecola mesophila KMM 241]
Length = 480
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 261/479 (54%), Positives = 354/479 (73%), Gaps = 7/479 (1%)
Query: 263 NIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSIN 322
N+ LL +LD L L ++++ D+AD YFQ +++E W+LE+GI+K G++++
Sbjct: 3 NLVEQNLLTAANLDRDHLANALDAIYQHDNDFADLYFQASQHETWVLEDGIIKDGSYNVE 62
Query: 323 QGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYS 382
+GVGVRA+SG+KT F YSDDI+ L+ A K++R+IA+ + GK K+ +K K++ Y
Sbjct: 63 RGVGVRAVSGEKTGFAYSDDINPEALMQAAKASRNIAS-AGGKHKVT-GLKNSKVDPKYH 120
Query: 383 FTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRP 442
+ I + EKI LL V+ R ++ + +V+ ++SG Y+ +LI DG DIRP
Sbjct: 121 ADNPILGMQDEEKIALLRAVDNYIRQQESALSQVVVSISGVYEEVLIAATDGTFCTDIRP 180
Query: 443 LVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDM-----ILEKCVSNSVNSALINLEAK 497
LV+L ++++EK+ RRE G+SG GGRY Y YF + E+ +++ A +N+ A
Sbjct: 181 LVRLNCSVLMEKDARRERGSSGAGGRYAYEYFLSQADGRPLYEQIADEAIHMARVNMRAV 240
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS +G+++AS TIVD+GT
Sbjct: 241 AAPAGQMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGASTFSGRMGEQVASVGCTIVDDGT 300
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
LANRRGS+++DDEG P+Q LI++GIL GYMQD +NARLM + TGN RRES+AH+P+P
Sbjct: 301 LANRRGSLSVDDEGTPSQYNVLIKDGILTGYMQDKLNARLMGVKPTGNGRRESYAHLPMP 360
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNTYML G+ PEEII+S+KNG+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T P
Sbjct: 361 RMTNTYMLGGQHEPEEIIASIKNGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTKP 420
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
+KGATLIG+GP ++KVSM+GND+ LD GVGVCGKDGQ VPVGVGQPTLK+D +TVGGT
Sbjct: 421 IKGATLIGNGPEAMQKVSMVGNDLALDKGVGVCGKDGQSVPVGVGQPTLKVDELTVGGT 479
>gi|433470214|ref|ZP_20427619.1| modulator of DNA gyrase family protein [Neisseria meningitidis
98080]
gi|432200748|gb|ELK56837.1| modulator of DNA gyrase family protein [Neisseria meningitidis
98080]
Length = 480
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/480 (56%), Positives = 357/480 (74%), Gaps = 4/480 (0%)
Query: 259 IHPLNIA-RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTG 317
+HP A ++ LLE L ++L K L + + VDYAD Y Q T E+W LEEGIVK+G
Sbjct: 1 MHPTYSAVQARLLEANRLSPELLAKSLCIIGAHHVDYADIYCQRTAYESWHLEEGIVKSG 60
Query: 318 NFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKI 377
+F INQGVGVRA+SGDKTAF Y+D + +++ + ++ R+I + GK+ K + +
Sbjct: 61 SFQINQGVGVRAVSGDKTAFAYADSLCIDSINRSARAVRAI-GAAGGKVSA-KMPSETRG 118
Query: 378 NSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIV 437
+ S +D I+ ++ K+ LL +VE IA+ DPR+++V+A L+ EYD++ + R DG
Sbjct: 119 KPVCSASDPIAGLDSAAKVALLNKVEAIAKAADPRIVQVMAGLTCEYDMVYLARLDGKHA 178
Query: 438 ADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAK 497
ADIRP+V+L VT+I ++ RRE G++G GGRY+ YF + ++ + V +V AL NLE++
Sbjct: 179 ADIRPMVRLNVTVIAKQGERREQGSAGGGGRYDLAYFDENLVRQFVDAAVKQALTNLESR 238
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
PAPAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+R+A+K +T+VD G
Sbjct: 239 PAPAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKGTSVFSGRIGERVAAKGVTVVDQGD 298
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
+A RRGS+NIDDEGN T+ T LIE+GIL GYMQD NARLM TGN RRES+A P+P
Sbjct: 299 IAGRRGSLNIDDEGNETRRTVLIEDGILVGYMQDETNARLMGTQSTGNGRRESYASAPMP 358
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNT+M NG + PEEII+S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++ GK+ YP
Sbjct: 359 RMTNTFMENGGYEPEEIIASIDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEGGKLQYP 418
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS-ITVGGT 736
VKGAT+IG+GP +LK VSMIGND LD GVGVCGK+GQ VPVGVGQPTL+ID+ +TVGG+
Sbjct: 419 VKGATIIGNGPEVLKHVSMIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAGLTVGGS 478
>gi|408823034|ref|ZP_11207924.1| modulator of DNA gyrase [Pseudomonas geniculata N1]
Length = 481
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/477 (55%), Positives = 346/477 (72%), Gaps = 3/477 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L +A+ LL P LD L G + VD+ D YFQ + E+W +E+GIVK G SI
Sbjct: 6 LTLAQDRLLRPGGLDTAGLEHTFGQLLGPGVDFGDLYFQHARRESWSVEDGIVKDGAHSI 65
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QGVGVRAISG+KT F YSDDI + L A +S R+I+ + G + +++ + +LY
Sbjct: 66 EQGVGVRAISGEKTGFAYSDDIHADALRVAAQSARAISRE--GGAQTGRSLLRGNARALY 123
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
D I + K+++L+R++ R DPRV +V+ +LSG D +LI R+DG++ AD+R
Sbjct: 124 PALDPIDGVGNEAKVEVLKRLDGYLRAADPRVKQVMVSLSGGVDTVLIARSDGVLGADVR 183
Query: 442 PLVQLFVTIIVEKNGRRE-IGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAP 500
PLV+L V +IVE NGRRE G G F D E ++ AL+NLEA PAP
Sbjct: 184 PLVRLNVQVIVEHNGRRESGYAGGGGRYGYEELFADGRPEAFAREALRQALVNLEAVPAP 243
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG+M VVLGPGWPG+LLHEA+GHGLEGDFNRKG+S ++ IG+R+A+ +TIVD+GTL
Sbjct: 244 AGVMPVVLGPGWPGVLLHEAVGHGLEGDFNRKGTSVYAGRIGERVAAPGVTIVDDGTLDG 303
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+NIDDEG+P+QCTTLIE+GIL GYMQD +NARLM ++ TGN RRESFAH+ +PRMT
Sbjct: 304 RRGSLNIDDEGHPSQCTTLIEDGILVGYMQDSLNARLMGVAPTGNGRRESFAHMTMPRMT 363
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYM G+ P+E+I SVK GLYA NF GGQVDIT+GK+VFSA++AY+I++G+IT PVKG
Sbjct: 364 NTYMRAGQHDPQEMIRSVKKGLYAVNFGGGQVDITSGKYVFSATEAYLIEDGRITTPVKG 423
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
ATLIG+GP ++KV M+GND+ LD GVG+CGKDGQ VPVGVGQP+L I+ ITVGGT
Sbjct: 424 ATLIGNGPETMQKVRMVGNDLALDEGVGICGKDGQSVPVGVGQPSLLIEGITVGGTQ 480
>gi|385852147|ref|YP_005898662.1| protein TldD [Neisseria meningitidis M04-240196]
gi|325206970|gb|ADZ02423.1| protein TldD [Neisseria meningitidis M04-240196]
Length = 480
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/480 (55%), Positives = 357/480 (74%), Gaps = 4/480 (0%)
Query: 259 IHPLNIA-RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTG 317
+HP A ++ LLE L ++L K L + + VDYAD Y Q T E+W LEEGIVK+G
Sbjct: 1 MHPTYSAVQARLLEANRLSPELLAKSLCIIGAHHVDYADIYCQRTAYESWHLEEGIVKSG 60
Query: 318 NFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKI 377
+F INQGVGVRA+SGDKTAF Y+D + +++ + ++ R+I + GK+ K + +
Sbjct: 61 SFQINQGVGVRAVSGDKTAFAYADSLCIDSINRSARAVRAI-GAAGGKVSA-KMPSETRG 118
Query: 378 NSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIV 437
+ S +D I+ ++ K+ LL +VE IA+ DPR+++V+A L+ EYD++ + R DG
Sbjct: 119 KPVCSASDPIAGLDSAAKVALLNKVEAIAKAADPRIVQVMAGLTCEYDMVYLARLDGKHA 178
Query: 438 ADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAK 497
ADIRP+V+L VT+I ++ RRE G++G GGRY+ YF + ++ + V +V AL NLE++
Sbjct: 179 ADIRPMVRLNVTVIAKQGERREQGSAGGGGRYDLAYFDENLVRQFVDAAVKQALTNLESR 238
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
PAPAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+R+A+K +T+VD G
Sbjct: 239 PAPAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKGTSVFSGRIGERVAAKGVTVVDQGD 298
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
+A RRGS+NIDDEGN T+ T LIE+GIL GYMQD NARL TGN RRES+A +P+P
Sbjct: 299 IAGRRGSLNIDDEGNETRRTVLIEDGILTGYMQDETNARLTGTQSTGNGRRESYASVPMP 358
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNT+M NG + PEEII+S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++ G++ YP
Sbjct: 359 RMTNTFMENGSYEPEEIIASIDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEGGRLQYP 418
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS-ITVGGT 736
VKGAT+IG+GP +LK VSMIGND LD GVGVCGK+GQ VPVGVGQPTL+ID+ +TVGG+
Sbjct: 419 VKGATIIGNGPEVLKHVSMIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAGLTVGGS 478
>gi|418289229|ref|ZP_12901593.1| protein TldD [Neisseria meningitidis NM233]
gi|372200040|gb|EHP14178.1| protein TldD [Neisseria meningitidis NM233]
Length = 494
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 268/486 (55%), Positives = 357/486 (73%), Gaps = 4/486 (0%)
Query: 253 LISQKNIHPLNIA-RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEE 311
+ +HP A R LLE L ++L K L + + VDYAD Y Q T E+W LEE
Sbjct: 9 FLCADTMHPTYSAVRERLLEANRLSPELLAKSLCIIGAHHVDYADIYCQRTAYESWHLEE 68
Query: 312 GIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKN 371
GIVK+G+F INQGVGVRA+SGDKTAF Y+D + +++ + ++ R+I + GK+ K
Sbjct: 69 GIVKSGSFQINQGVGVRAVSGDKTAFAYADSLCIDSINRSARAVRAI-GAAGGKVSA-KM 126
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ + + S +D I+ ++ K+ LL +VE IA+ DPR+++V+A L+ EYD++ + R
Sbjct: 127 PSETRGKPVCSASDPIAGLDSAAKVALLNKVEAIAKAADPRIVQVMAGLTCEYDMVYLAR 186
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
DG ADIRP+V+L VT+I ++ RRE G++G GGRY+ YF + ++ + V +V AL
Sbjct: 187 LDGKHAADIRPMVRLNVTVIAKQGERREQGSAGGGGRYDLAYFDENLVRQFVDAAVKQAL 246
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
NLE++PAPAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+R+A+K +T
Sbjct: 247 TNLESRPAPAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKGTSVFSGRIGERVAAKGVT 306
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD G +A RRGS+NIDDEGN T+ T LIE+GIL GYMQD NARL TGN RRES+
Sbjct: 307 VVDQGDIAGRRGSLNIDDEGNETRRTVLIEDGILVGYMQDETNARLTGTQSTGNGRRESY 366
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A +P+PRMTNT+M NG + PEEII+S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++
Sbjct: 367 ASVPMPRMTNTFMENGSYEPEEIIASIDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEG 426
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS- 730
G++ YPVKGAT+IG+GP +LK VSMIGND LD GVGVCGK+GQ VPVGVGQPTL+ID+
Sbjct: 427 GRLQYPVKGATIIGNGPEVLKHVSMIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAG 486
Query: 731 ITVGGT 736
+TVGG+
Sbjct: 487 LTVGGS 492
>gi|407792286|ref|ZP_11139353.1| microcin-processing peptidase 2 [Gallaecimonas xiamenensis 3-C-1]
gi|407197687|gb|EKE67740.1| microcin-processing peptidase 2 [Gallaecimonas xiamenensis 3-C-1]
Length = 482
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 277/475 (58%), Positives = 363/475 (76%), Gaps = 9/475 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P LD L + LG + +++VDYAD YFQ +E+W+LE+GI+K G+F+I +GVGVR
Sbjct: 11 LLAPAGLDNAGLEQTLGLIHQHQVDYADLYFQGAAHESWVLEDGIIKDGSFNIERGVGVR 70
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
AISG+KT F Y++D++ TL +A + RSIAN G++K+ ++ +LY + +
Sbjct: 71 AISGEKTGFAYAEDLNPQTLKDAALAARSIANSGGQGRVKVAS---PVETRALYGQGNPL 127
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S++ +K+ LL ++ R D V +VI +LSG Y+ +L+ +DG + ADIRPLV+
Sbjct: 128 DSLSQLDKLALLREADQFTRKLDSHVTQVILSLSGVYEEVLVAGSDGTLAADIRPLVRFN 187
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEK-----CVSNSVNSALINLEAKPAPAG 502
V+++VEK+GRRE G++G GGR+ Y+YF + + +V AL NLEA PAPAG
Sbjct: 188 VSVLVEKDGRRERGSAGGGGRFGYDYFLQLDGGEKRTLGYAREAVRMALTNLEAVPAPAG 247
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
M+VVLG GWPG+LLHEA+GHGLEGDFNRKGSSAFS IG+R+A+K +T+VDNGTLA+RR
Sbjct: 248 QMEVVLGNGWPGVLLHEAVGHGLEGDFNRKGSSAFSGRIGQRVAAKGVTVVDNGTLADRR 307
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS++IDDEG PTQ LIE+GILKGYMQD NARLM ++ TGN RRES+AH+P+PRMTNT
Sbjct: 308 GSLSIDDEGTPTQENILIEDGILKGYMQDKHNARLMGVAPTGNGRRESYAHLPMPRMTNT 367
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML G+ P EII+SVK G++A NF GGQVDIT+GKFVFSAS+AY+I++GK+T P++GAT
Sbjct: 368 YMLAGQHDPAEIIASVKKGIFAPNFGGGQVDITSGKFVFSASEAYLIEDGKVTRPIRGAT 427
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
LIG GP +++K+SMIGND KLDPGVGVCGKDGQ VPVGVGQPTLKID ITVGGT
Sbjct: 428 LIGMGPEVMQKISMIGNDAKLDPGVGVCGKDGQSVPVGVGQPTLKIDGITVGGTE 482
>gi|71276038|ref|ZP_00652319.1| Peptidase U62, modulator of DNA gyrase [Xylella fastidiosa Dixon]
gi|170729679|ref|YP_001775112.1| TldD protein [Xylella fastidiosa M12]
gi|71163121|gb|EAO12842.1| Peptidase U62, modulator of DNA gyrase [Xylella fastidiosa Dixon]
gi|71730772|gb|EAO32845.1| Peptidase U62, modulator of DNA gyrase [Xylella fastidiosa subsp.
sandyi Ann-1]
gi|167964472|gb|ACA11482.1| TldD protein [Xylella fastidiosa M12]
Length = 485
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 265/479 (55%), Positives = 346/479 (72%), Gaps = 3/479 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L++A S LL P LD+ + I G + VD+ D YFQ + E+W +E+GIVK G SI
Sbjct: 6 LSVAESRLLLPAGLDDGQIDSIFGTLLGPGVDFGDLYFQHARRESWSIEDGIVKDGTHSI 65
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNI--KKIKINS 379
QGVGVRAISG+KT F YSDDI+++ L+ A + R+I+ ++ + + +
Sbjct: 66 EQGVGVRAISGEKTGFAYSDDINRDALLEAAYAARAISRSPGDGVQGTHAVLRRHGRELC 125
Query: 380 LYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVAD 439
LY D + ++ EKI ++ RV+++ R DPRV +V+ NLSG DV+LI R+DG++ AD
Sbjct: 126 LYPALDPVGGMDNAEKIAVMRRVDQLLRAADPRVTQVMINLSGGVDVVLIARSDGVLAAD 185
Query: 440 IRPLVQLFVTIIVEKNGRRE-IGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKP 498
+RPLV+L V +IVE +GRRE G G F D E ++ AL+NLEA P
Sbjct: 186 VRPLVRLNVQVIVEGHGRRESGYAGGGGRYGYAELFADGRPEAFAREALRQALVNLEAIP 245
Query: 499 APAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL 558
APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK +S ++ IG+R+AS +TIVD+GTL
Sbjct: 246 APAGVMPVVLGAGWPGVLLHEAVGHGLEGDFNRKATSVYAGRIGERVASPGVTIVDDGTL 305
Query: 559 ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPR 618
RRGS+NIDDEG PTQCTTLIE+G+L GYMQD +NARLM ++ TGN RRESFAH+ +PR
Sbjct: 306 DGRRGSLNIDDEGTPTQCTTLIEDGVLVGYMQDTLNARLMGVASTGNGRRESFAHLTMPR 365
Query: 619 MTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPV 678
MTNTYM G EE+I SVK GLYA NF GGQVDIT+GK+VFSA++AY+I++G++T P+
Sbjct: 366 MTNTYMRAGAHSREEMIRSVKKGLYAVNFGGGQVDITSGKYVFSATEAYLIEDGRVTAPI 425
Query: 679 KGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
KGATLIG+GP +++V MIG+D+ LD GVGVCGKDGQ VPVGVGQP+L ID +TVGGT
Sbjct: 426 KGATLIGNGPETMQRVRMIGDDLALDAGVGVCGKDGQSVPVGVGQPSLLIDGLTVGGTQ 484
>gi|416189373|ref|ZP_11615286.1| protein TldD [Neisseria meningitidis M0579]
gi|325135297|gb|EGC57918.1| protein TldD [Neisseria meningitidis M0579]
Length = 494
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 266/486 (54%), Positives = 360/486 (74%), Gaps = 4/486 (0%)
Query: 253 LISQKNIHPLNIA-RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEE 311
+ +HP A ++ LLE L ++L K L + + VDYAD Y Q T E+W LEE
Sbjct: 9 FLCADTMHPTYSAVQARLLEANRLSPELLAKSLCIIGAHHVDYADIYCQRTAYESWHLEE 68
Query: 312 GIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKN 371
GIVK+G+F INQGVGVRA+SGDKTAF Y+D + +++ + ++ R+I + GK+ K
Sbjct: 69 GIVKSGSFQINQGVGVRAVSGDKTAFAYADSLCIDSINRSARAVRAI-GAAGGKVSA-KM 126
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ + + S +D I+ ++ K+ LL +VE IA+ DPR+++V+A L+ EYD++ + R
Sbjct: 127 PSETRGKPVCSASDPIAGLDSAAKVALLNKVEAIAKAADPRIVQVMAGLTCEYDMVYLAR 186
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
DG ADIRP+V++ VT+I ++ RRE G++G GGRY+ YF + ++ + V ++V AL
Sbjct: 187 LDGKHAADIRPMVRMNVTVIAKQGERREQGSAGGGGRYDLAYFDENLVHRFVDSAVKQAL 246
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
NLE++PAPAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+R+A+K +T
Sbjct: 247 TNLESRPAPAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKGTSVFSGRIGERVAAKGVT 306
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD G +A RRGS+NIDDEGN T+ T LIE+GIL GYMQD NARLM TGN RRES+
Sbjct: 307 VVDQGDIAGRRGSLNIDDEGNETRRTVLIEDGILVGYMQDETNARLMGTQSTGNGRRESY 366
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A +P+PRMTNT+M NG + P+EII+S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++
Sbjct: 367 ASVPMPRMTNTFMENGGYEPDEIIASIDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEG 426
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS- 730
G++ YPVKGAT+IG+GP +LK VSMIGND LD GVGVCGK+GQ VPVGVGQPTL+ID+
Sbjct: 427 GRLQYPVKGATIIGNGPEVLKHVSMIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAG 486
Query: 731 ITVGGT 736
+TVGG+
Sbjct: 487 LTVGGS 492
>gi|421564167|ref|ZP_16009976.1| U62 family peptidase 2 TldD [Neisseria meningitidis NM2795]
gi|402339098|gb|EJU74319.1| U62 family peptidase 2 TldD [Neisseria meningitidis NM2795]
Length = 480
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/480 (55%), Positives = 356/480 (74%), Gaps = 4/480 (0%)
Query: 259 IHPLNIA-RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTG 317
+HP A ++ LLE L ++L K L + + VDYAD Y Q T E+W LEEGIVK+G
Sbjct: 1 MHPTYSAVQARLLEANRLSPELLAKSLCIIGAHHVDYADIYCQRTAYESWHLEEGIVKSG 60
Query: 318 NFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKI 377
+F INQGVGVRA+SGDKTAF Y+D + +++ + ++ R+I + GK+ K + +
Sbjct: 61 SFQINQGVGVRAVSGDKTAFAYADSLCIDSINRSARAVRAI-GAAGGKVSA-KMPSETRG 118
Query: 378 NSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIV 437
+ S +D I+ ++ K+ LL +VE IA+ DPR+++V+A L+ EYD++ + R DG
Sbjct: 119 KPVCSASDPIAGLDSAAKVALLNKVEAIAKAADPRIVQVMAGLTCEYDMVYLARLDGKHA 178
Query: 438 ADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAK 497
ADIRP+V+L VT+I ++ RRE G++G GGRY+ YF + ++ + V +V AL NLE++
Sbjct: 179 ADIRPMVRLNVTVIAKQGERREQGSAGGGGRYDLAYFDENLVRQFVDAAVKQALTNLESR 238
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
PAPAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+R+A+K +T+VD G
Sbjct: 239 PAPAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKGTSVFSGRIGERVAAKGVTVVDQGD 298
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
+A RRGS+NIDDEGN T+ T LIE+GIL GYMQD NARL TGN RRES+A P+P
Sbjct: 299 IAGRRGSLNIDDEGNETRRTVLIEDGILTGYMQDETNARLTGTQSTGNGRRESYASAPMP 358
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNT+M NG + PEEII+S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++ G++ YP
Sbjct: 359 RMTNTFMENGSYEPEEIIASIDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEGGRLQYP 418
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS-ITVGGT 736
VKGAT+IG+GP +LK VSMIGND LD GVGVCGK+GQ VPVGVGQPTL+ID+ +TVGG+
Sbjct: 419 VKGATIIGNGPEVLKHVSMIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAGLTVGGS 478
>gi|385856074|ref|YP_005902587.1| protein TldD [Neisseria meningitidis M01-240355]
gi|421556530|ref|ZP_16002445.1| U62 family peptidase 2 TldD [Neisseria meningitidis 80179]
gi|325205015|gb|ADZ00469.1| protein TldD [Neisseria meningitidis M01-240355]
gi|402337203|gb|EJU72453.1| U62 family peptidase 2 TldD [Neisseria meningitidis 80179]
Length = 480
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/480 (55%), Positives = 356/480 (74%), Gaps = 4/480 (0%)
Query: 259 IHPLNIA-RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTG 317
+HP A ++ LLE L ++L K L + + VDYAD Y Q T E+W LEEGIVK+G
Sbjct: 1 MHPTYSAVQARLLEANRLSPELLAKSLCIIGAHHVDYADIYCQRTAYESWHLEEGIVKSG 60
Query: 318 NFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKI 377
+F INQGVGVRA+SGDKTAF Y+D + +++ + ++ R+I + GK+ K + +
Sbjct: 61 SFQINQGVGVRAVSGDKTAFAYADSLCIDSINRSARAVRAI-GAAGGKVSA-KMPSETRG 118
Query: 378 NSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIV 437
+ S +D I+ ++ K+ LL +VE IA+ DPR+++V+A L+ EYD++ + R DG
Sbjct: 119 KPVCSASDPIAGLDSAAKVALLNKVEAIAKAADPRIVQVMAGLTCEYDMVYLARLDGKHA 178
Query: 438 ADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAK 497
ADIRP+V+L VT+I ++ RRE G++G GGRY+ YF + ++ + V +V AL NLE++
Sbjct: 179 ADIRPMVRLNVTVIAKQGERREQGSAGGGGRYDLAYFDENLVHRFVDAAVKQALTNLESR 238
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
PAPAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+R+A+K +T+VD G
Sbjct: 239 PAPAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKGTSVFSGRIGERVAAKGVTVVDQGD 298
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
+A RRGS+NIDDEGN T+ T LIE+GIL GYMQD NARL TGN RRES+A P+P
Sbjct: 299 IAGRRGSLNIDDEGNETRRTVLIEDGILTGYMQDETNARLTGTQSTGNGRRESYASAPMP 358
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNT+M NG + PEEII+S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++ G++ YP
Sbjct: 359 RMTNTFMENGSYEPEEIIASIDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEGGRLQYP 418
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS-ITVGGT 736
VKGAT+IG+GP +LK VSMIGND LD GVGVCGK+GQ VPVGVGQPTL+ID+ +TVGG+
Sbjct: 419 VKGATIIGNGPEVLKHVSMIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAGLTVGGS 478
>gi|271498848|ref|YP_003331873.1| peptidase U62 modulator of DNA gyrase [Dickeya dadantii Ech586]
gi|270342403|gb|ACZ75168.1| peptidase U62 modulator of DNA gyrase [Dickeya dadantii Ech586]
Length = 481
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 261/474 (55%), Positives = 348/474 (73%), Gaps = 9/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL L + L ILG + + ++DYAD YFQ + +E+W+LE+ I+K G++ I+QGVG+R
Sbjct: 10 LLTANKLSHQDLQSILGTLSERRLDYADLYFQSSYHESWVLEDRIIKDGSYHIDQGVGIR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSLYSFTDTI 387
AISG+KT F Y+D I+ N L + ++ RSI Q NG +K + + LY + +
Sbjct: 70 AISGEKTGFAYADQITLNALQQSAQAARSIVREQGNGTVKTLGEVPH---RGLYPQANPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S++ +KI LL+RV+ AR D RV +V A+L+G Y+++L+ DG + AD+RPLV+L
Sbjct: 127 DSLSREDKIALLQRVDATARAADSRVQEVTASLTGVYELVLVAATDGTLAADVRPLVRLS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEAKPAPAG 502
V+++VE++GRRE G+SG G R Y+YF + E +V AL+NL A APAG
Sbjct: 187 VSVLVEEDGRRERGSSGGGARTGYDYFWQQADGEARAEAWAKEAVRMALVNLSAVAAPAG 246
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +GK +AS+ T+VD+GTL RR
Sbjct: 247 SMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGKLVASELCTVVDDGTLEGRR 306
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+ +DDEG P Q LIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNT
Sbjct: 307 GSLAMDDEGVPGQYNVLIENGVLKGYMQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNT 366
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML G+ PEEII+SV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+ G++T PVKGAT
Sbjct: 367 YMLAGQSTPEEIIASVEYGLYAPNFGGGQVDITSGKFVFSTSEAYLIEKGRVTTPVKGAT 426
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
LIG G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK+D ITVGGT
Sbjct: 427 LIGSGIEAMQQISMVGNDLALDRGVGVCGKEGQSLPVGVGQPTLKLDGITVGGT 480
>gi|385341090|ref|YP_005894961.1| protein TldD [Neisseria meningitidis M01-240149]
gi|385858029|ref|YP_005904541.1| protein TldD [Neisseria meningitidis NZ-05/33]
gi|416174987|ref|ZP_11609355.1| protein TldD [Neisseria meningitidis OX99.30304]
gi|325129315|gb|EGC52152.1| protein TldD [Neisseria meningitidis OX99.30304]
gi|325201296|gb|ADY96750.1| protein TldD [Neisseria meningitidis M01-240149]
gi|325208918|gb|ADZ04370.1| protein TldD [Neisseria meningitidis NZ-05/33]
Length = 480
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 266/480 (55%), Positives = 359/480 (74%), Gaps = 4/480 (0%)
Query: 259 IHPLNIA-RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTG 317
+HP A ++ LLE L ++L K L + + VDYAD Y Q T E+W LEEGIVK+G
Sbjct: 1 MHPTYSAVQARLLEANRLSPELLAKSLCIIGAHHVDYADIYCQRTAYESWHLEEGIVKSG 60
Query: 318 NFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKI 377
+F INQGVGVRA+SGDKTAF Y+D + +++ + ++ R+I + GK+ K + +
Sbjct: 61 SFQINQGVGVRAVSGDKTAFAYADSLCIDSINRSARAVRAI-GAAGGKVSA-KMPSETRG 118
Query: 378 NSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIV 437
+ S +D I+ ++ K+ LL +VE IA+ DPR+++V+A L+ EYD++ + R DG
Sbjct: 119 KPVCSASDPIAGLDSAAKVALLNKVEAIAKAADPRIVQVMAGLTCEYDMVYLARLDGKHA 178
Query: 438 ADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAK 497
ADIRP+V++ VT+I ++ RRE G++G GGRY+ YF + ++ + V ++V AL NLE++
Sbjct: 179 ADIRPMVRMNVTVIAKQGERREQGSAGGGGRYDLAYFDENLVHRFVDSAVKQALTNLESR 238
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
PAPAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+R+A+K +T+VD G
Sbjct: 239 PAPAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKGTSVFSGRIGERVAAKGVTVVDQGD 298
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
+A RRGS+NIDDEGN T+ T LIE+GIL GYMQD NARLM TGN RRES+A +P+P
Sbjct: 299 IAGRRGSLNIDDEGNETRRTVLIEDGILVGYMQDETNARLMGTQSTGNGRRESYASVPMP 358
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNT+M NG + P+EII+S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++ G++ YP
Sbjct: 359 RMTNTFMENGGYEPDEIIASIDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEGGRLQYP 418
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS-ITVGGT 736
VKGAT+IG+GP +LK VSMIGND LD GVGVCGK+GQ VPVGVGQPTL+ID+ +TVGG+
Sbjct: 419 VKGATIIGNGPEVLKHVSMIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAGLTVGGS 478
>gi|110833397|ref|YP_692256.1| TldD protein [Alcanivorax borkumensis SK2]
gi|110646508|emb|CAL15984.1| TldD protein [Alcanivorax borkumensis SK2]
Length = 506
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 250/476 (52%), Positives = 350/476 (73%), Gaps = 3/476 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L+IA S+LL P +L+ + L +L N + DYAD YFQ +++E W+LE+GIV+ +F+
Sbjct: 32 LSIAESVLLAPANLNTQHLASLLNNKLTGQADYADIYFQHSRHEAWVLEDGIVRDASFNT 91
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+G GVR + G+KT F YSDDI+ L A + R+I Q G+ + I+ + + Y
Sbjct: 92 ERGAGVRIVQGEKTGFAYSDDITLAALQQASGAARAITQQ--GQDRQIQLASRAAPPARY 149
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
D + EK+ LL+R++ +AR DP +++V A+LS E DV+++ +DG + AD+R
Sbjct: 150 GAMDPLLDWPATEKVALLQRIDAMARSLDPAIVEVTASLSAEQDVVMVVASDGTLAADVR 209
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAP 500
PL++ V++I E+ GRRE G++G GGR Y++ + +E +V AL+NLEA+ AP
Sbjct: 210 PLIRCNVSVIAERAGRRERGSAGGGGRVAYDWLLQEERIETWTREAVRGALLNLEAEAAP 269
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG M VVLGPGWPG+LLHEA+GHGLEGDFNRKG+S F+ +G+++AS ++VD+GTL +
Sbjct: 270 AGTMPVVLGPGWPGVLLHEAVGHGLEGDFNRKGTSMFAKKMGEQVASPLCSVVDDGTLMD 329
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+N+DDEG P+ C TLIENG L GYMQD NARLM ++ TGN RRES+AH+P+PRMT
Sbjct: 330 RRGSLNVDDEGTPSACNTLIENGKLVGYMQDKTNARLMGVAPTGNGRRESYAHLPMPRMT 389
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYML G+ P++II+S+ G+YA NF+GGQVDIT+G+FVFS S+AY+++ GKI PVKG
Sbjct: 390 NTYMLPGESDPQDIIASLDRGIYAVNFAGGQVDITSGRFVFSTSEAYLVEKGKIVCPVKG 449
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
ATLIG G +++ +SM+GND+ LD G+GVCGKDGQ VPVGVGQPTL++D++TVGGT
Sbjct: 450 ATLIGSGAEVMRGISMVGNDLALDSGIGVCGKDGQSVPVGVGQPTLRVDALTVGGT 505
>gi|385340913|ref|YP_005894785.1| protein TldD [Neisseria meningitidis G2136]
gi|416180150|ref|ZP_11611335.1| protein TldD [Neisseria meningitidis M6190]
gi|416193700|ref|ZP_11617256.1| protein TldD [Neisseria meningitidis ES14902]
gi|416209053|ref|ZP_11621205.1| protein TldD [Neisseria meningitidis 961-5945]
gi|325131309|gb|EGC54020.1| protein TldD [Neisseria meningitidis M6190]
gi|325137338|gb|EGC59926.1| protein TldD [Neisseria meningitidis ES14902]
gi|325141379|gb|EGC63861.1| protein TldD [Neisseria meningitidis 961-5945]
gi|325199157|gb|ADY94613.1| protein TldD [Neisseria meningitidis G2136]
Length = 480
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/480 (55%), Positives = 357/480 (74%), Gaps = 4/480 (0%)
Query: 259 IHPLNIA-RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTG 317
+HP A ++ LLE L ++L K L + + VDYAD Y Q T E+W LEEGIVK+G
Sbjct: 1 MHPTYSAVQARLLEANRLSPELLAKSLCIIGAHHVDYADIYCQRTAYESWHLEEGIVKSG 60
Query: 318 NFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKI 377
+F INQGVGVRA+SGDKTAF Y+D + +++ + ++ R+I + GK+ K + +
Sbjct: 61 SFQINQGVGVRAVSGDKTAFAYADSLCIDSINRSARAVRAI-GAAGGKVSA-KMPSETRG 118
Query: 378 NSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIV 437
+ S +D I+ ++ K+ LL +VE IA+ DPR+++V+A L+ EYD++ + R DG
Sbjct: 119 KPVCSASDPIAGLDSAAKVALLNKVEAIAKAADPRIVQVMAGLTCEYDMVYLARLDGKHA 178
Query: 438 ADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAK 497
ADIRP+V+L VT+I ++ RRE G++G GGRY+ YF + ++ + V +V AL NLE++
Sbjct: 179 ADIRPMVRLNVTVIAKQGERREQGSAGGGGRYDLAYFDENLVRQFVDAAVKQALTNLESR 238
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
PAPAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+R+A+K +T+VD G
Sbjct: 239 PAPAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKGTSVFSGRIGERVAAKGVTVVDQGD 298
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
+A RRGS+NIDDEGN T+ T LIE+GIL GYMQD NARL TGN RRES+A +P+P
Sbjct: 299 IAGRRGSLNIDDEGNETRRTVLIEDGILVGYMQDETNARLTGTQSTGNGRRESYASVPMP 358
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNT+M NG + PEEII+S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++ G++ YP
Sbjct: 359 RMTNTFMENGSYEPEEIIASIDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEGGRLQYP 418
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS-ITVGGT 736
VKGAT+IG+GP +LK VSMIGND LD GVGVCGK+GQ VPVGVGQPTL+ID+ +TVGG+
Sbjct: 419 VKGATIIGNGPEVLKHVSMIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAGLTVGGS 478
>gi|348027816|ref|YP_004870502.1| peptidase [Glaciecola nitratireducens FR1064]
gi|347945159|gb|AEP28509.1| putative peptidase [Glaciecola nitratireducens FR1064]
Length = 481
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 255/474 (53%), Positives = 356/474 (75%), Gaps = 8/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL +D+ L +L ++F ++ ++AD YFQ +++E+W+LE+GIVK G+++I +GVGVR
Sbjct: 9 LLTASGIDKNRLSSLLEDVFSHQANFADLYFQSSQHESWVLEDGIVKDGSYNIERGVGVR 68
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
ISG+KT F YSD+IS L +A K+ R IA G + I+ K+ SLY+ + I
Sbjct: 69 VISGEKTGFAYSDEISSRALEDACKAARGIA--PAGGTQKIERFSSAKLKSLYTEQNPIL 126
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ EKI LL+ V++ R P +V+ +L+G Y+ IL+ DG DIRPL++L
Sbjct: 127 TMQDSEKITLLQTVDRYIRKAAPHATQVVVSLTGVYEEILVAATDGTFATDIRPLIRLNC 186
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDM------ILEKCVSNSVNSALINLEAKPAPAG 502
++++EK+G+RE G++G GGR Y YF + + EK ++++ A +NL A PAPAG
Sbjct: 187 SVLLEKDGKRERGSAGAGGRRTYEYFQSISSDNKPLYEKLADDAIHMAQVNLAAVPAPAG 246
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
+M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+++A+K +T++D+GT+++RR
Sbjct: 247 LMPVVLGNGWPGVLLHEAVGHGLEGDFNRKGASTFSGRIGQQVAAKGVTVIDDGTMSDRR 306
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+++DDEG +Q LIE+GILKGYMQD NA LM +S TGN RRES+AH+P+PRMTNT
Sbjct: 307 GSLSVDDEGVKSQRNVLIEDGILKGYMQDKHNASLMGVSPTGNGRRESYAHLPMPRMTNT 366
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML G+ PE+II+SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T P+KGAT
Sbjct: 367 YMLGGQHRPEDIIASVEKGVYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTTPIKGAT 426
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
LIG+GP +++K+SMIGND+ LD G+GVCGKDGQ +PVGVGQPTLK+D +TVGGT
Sbjct: 427 LIGNGPQVMQKISMIGNDLSLDMGIGVCGKDGQSLPVGVGQPTLKVDELTVGGT 480
>gi|433522766|ref|ZP_20479445.1| modulator of DNA gyrase family protein [Neisseria meningitidis
61103]
gi|432257281|gb|ELL12584.1| modulator of DNA gyrase family protein [Neisseria meningitidis
61103]
Length = 494
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/486 (54%), Positives = 357/486 (73%), Gaps = 4/486 (0%)
Query: 253 LISQKNIHPLNIA-RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEE 311
+ +HP A ++ LLE L ++L K L + + VDYAD Y Q T E+W LEE
Sbjct: 9 FLCADTMHPTYSAVQARLLEANRLSPELLAKSLCIIGAHHVDYADIYCQRTAYESWHLEE 68
Query: 312 GIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKN 371
GIVK+G+F INQGVGVRA+SGDKTAF Y+D + +++ + ++ R+I + GK+ K
Sbjct: 69 GIVKSGSFQINQGVGVRAVSGDKTAFAYADSLCIDSINRSARAVRAI-GAAGGKVSA-KM 126
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ + + S +D I+ ++ K+ LL +VE IA+ DPR+++V+A L+ EYD++ + R
Sbjct: 127 PSETRGKPVCSASDPIAGLDSAAKVALLNKVEAIAKAADPRIVQVMAGLTCEYDMVYLAR 186
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
DG ADIRP+V+L VT+I ++ RRE G++G GGRY+ YF + ++ + V +V AL
Sbjct: 187 LDGKHAADIRPMVRLNVTVIAKQGERREQGSAGGGGRYDLAYFDENLVHRFVDAAVKQAL 246
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
NLE++PAPAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+R+A+K +T
Sbjct: 247 TNLESRPAPAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKGTSVFSGRIGERVAAKGVT 306
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD G +A RRGS+NIDDEGN T+ T LIE+GIL GYMQD NARL TGN RRES+
Sbjct: 307 VVDQGDIAGRRGSLNIDDEGNETRRTVLIEDGILTGYMQDETNARLTGTQSTGNGRRESY 366
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A P+PRMTNT+M NG + PEEII+S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++
Sbjct: 367 ASAPMPRMTNTFMENGSYEPEEIIASIDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEG 426
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS- 730
G++ YPVKGAT+IG+GP +LK VSMIGND LD GVGVCGK+GQ VPVGVGQPTL+ID+
Sbjct: 427 GRLQYPVKGATIIGNGPEVLKHVSMIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAG 486
Query: 731 ITVGGT 736
+TVGG+
Sbjct: 487 LTVGGS 492
>gi|109896521|ref|YP_659776.1| C69 family peptidase [Pseudoalteromonas atlantica T6c]
gi|109698802|gb|ABG38722.1| microcin-processing peptidase 2, Unknown type peptidase, MEROPS
family U62 [Pseudoalteromonas atlantica T6c]
Length = 480
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 260/479 (54%), Positives = 353/479 (73%), Gaps = 7/479 (1%)
Query: 263 NIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSIN 322
N+ LL +LD L L ++++ D+AD YFQ +++E W+LE+GI+K G++++
Sbjct: 3 NLVEQNLLTAANLDRDHLANALDAIYQHDNDFADLYFQASQHETWVLEDGIIKDGSYNVE 62
Query: 323 QGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYS 382
+GVGVRA+SG+KT F YSDDI+ L+ A K++R+IA+ + GK K+ +K K++ Y
Sbjct: 63 RGVGVRAVSGEKTGFAYSDDINPEALMQAAKASRNIAS-AGGKHKVT-GLKNSKVDPKYH 120
Query: 383 FTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRP 442
+ I + EKI LL V+ R ++ + +V+ ++SG Y+ +LI DG DIRP
Sbjct: 121 ADNPILGMQDEEKIALLRAVDNYIRQQESALSQVVVSISGVYEEVLIAATDGTFCTDIRP 180
Query: 443 LVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDM-----ILEKCVSNSVNSALINLEAK 497
LV+L ++++EK+ RRE G+SG GGRY Y YF + E+ +++ A +N+ A
Sbjct: 181 LVRLNCSVLMEKDARRERGSSGAGGRYAYEYFLSQADGRPLYEQIADEAIHMARVNMRAV 240
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS +G+++AS TIVD+GT
Sbjct: 241 AAPAGQMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGASTFSGRMGEQVASAGCTIVDDGT 300
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
LANRRGS+++DDEG P+Q LI++GIL GYMQD +NARLM + TGN RRES+AH+P+P
Sbjct: 301 LANRRGSLSVDDEGTPSQYNVLIKDGILTGYMQDKLNARLMGVKPTGNGRRESYAHLPMP 360
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNTYML G+ PE II+S+KNG+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T P
Sbjct: 361 RMTNTYMLGGQHEPEAIIASIKNGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTKP 420
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
+KGATLIG+GP ++KVSM+GND+ LD GVGVCGKDGQ VPVGVGQPTLK+D +TVGGT
Sbjct: 421 IKGATLIGNGPEAMQKVSMVGNDLALDKGVGVCGKDGQSVPVGVGQPTLKVDELTVGGT 479
>gi|121635724|ref|YP_975969.1| TLDD protein [Neisseria meningitidis FAM18]
gi|418291478|ref|ZP_12903477.1| protein TldD [Neisseria meningitidis NM220]
gi|433468065|ref|ZP_20425512.1| modulator of DNA gyrase family protein [Neisseria meningitidis
87255]
gi|433493508|ref|ZP_20450589.1| modulator of DNA gyrase family protein [Neisseria meningitidis
NM586]
gi|433495559|ref|ZP_20452617.1| modulator of DNA gyrase family protein [Neisseria meningitidis
NM762]
gi|433497630|ref|ZP_20454655.1| modulator of DNA gyrase family protein [Neisseria meningitidis
M7089]
gi|433499675|ref|ZP_20456676.1| modulator of DNA gyrase family protein [Neisseria meningitidis
M7124]
gi|433501744|ref|ZP_20458723.1| modulator of DNA gyrase family protein [Neisseria meningitidis
NM174]
gi|433503858|ref|ZP_20460809.1| modulator of DNA gyrase family protein [Neisseria meningitidis
NM126]
gi|120867430|emb|CAM11202.1| TLDD protein homolog [Neisseria meningitidis FAM18]
gi|372199778|gb|EHP13966.1| protein TldD [Neisseria meningitidis NM220]
gi|432200976|gb|ELK57063.1| modulator of DNA gyrase family protein [Neisseria meningitidis
87255]
gi|432225568|gb|ELK81309.1| modulator of DNA gyrase family protein [Neisseria meningitidis
NM586]
gi|432227128|gb|ELK82840.1| modulator of DNA gyrase family protein [Neisseria meningitidis
NM762]
gi|432231569|gb|ELK87228.1| modulator of DNA gyrase family protein [Neisseria meningitidis
M7089]
gi|432232358|gb|ELK88003.1| modulator of DNA gyrase family protein [Neisseria meningitidis
M7124]
gi|432232745|gb|ELK88381.1| modulator of DNA gyrase family protein [Neisseria meningitidis
NM174]
gi|432238132|gb|ELK93708.1| modulator of DNA gyrase family protein [Neisseria meningitidis
NM126]
Length = 494
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/486 (54%), Positives = 358/486 (73%), Gaps = 4/486 (0%)
Query: 253 LISQKNIHPLNIA-RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEE 311
+ +HP A ++ LLE L ++L K L + + VDYAD Y Q T E+W LEE
Sbjct: 9 FLCADTMHPTYSAVQARLLEANRLSPELLAKSLCIIGAHHVDYADIYCQRTAYESWHLEE 68
Query: 312 GIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKN 371
GIVK+G+F INQGVGVRA+SGDKTAF Y+D + +++ + ++ R+I + GK+ K
Sbjct: 69 GIVKSGSFQINQGVGVRAVSGDKTAFAYADSLCIDSINRSARAVRAI-GAAGGKVSA-KM 126
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ + + S +D I+ ++ K+ LL +VE IA+ DPR+++V+A L+ EYD++ + R
Sbjct: 127 PSETRGKPVCSASDPIAGLDSAAKVALLNKVEAIAKAADPRIVQVMAGLTCEYDMVYLAR 186
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
DG ADIRP+V+L VT+I ++ RRE G++G GGRY+ YF + ++ + V +V AL
Sbjct: 187 LDGKHAADIRPMVRLNVTVIAKQGERREQGSAGGGGRYDLAYFDENLVRQFVDAAVKQAL 246
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
NLE++PAPAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+R+A+K +T
Sbjct: 247 TNLESRPAPAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKGTSVFSGRIGERVAAKGVT 306
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD G +A RRGS+NIDDEGN T+ T LIE+GIL GYMQD NARL TGN RRES+
Sbjct: 307 VVDQGDIAGRRGSLNIDDEGNETRRTVLIEDGILVGYMQDETNARLTGTQSTGNGRRESY 366
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A +P+PRMTNT+M NG + PEEII+S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++
Sbjct: 367 ASVPMPRMTNTFMENGSYEPEEIIASIDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEG 426
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS- 730
G++ YPVKGAT+IG+GP +LK VSMIGND LD GVGVCGK+GQ VPVGVGQPTL+ID+
Sbjct: 427 GRLQYPVKGATIIGNGPEVLKHVSMIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAG 486
Query: 731 ITVGGT 736
+TVGG+
Sbjct: 487 LTVGGS 492
>gi|421566390|ref|ZP_16012140.1| U62 family peptidase 2 TldD [Neisseria meningitidis NM3081]
gi|402340303|gb|EJU75505.1| U62 family peptidase 2 TldD [Neisseria meningitidis NM3081]
Length = 480
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/480 (55%), Positives = 357/480 (74%), Gaps = 4/480 (0%)
Query: 259 IHPLNIA-RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTG 317
+HP A ++ LLE L ++L K L + + VDYAD Y Q T E+W LEEGIVK+G
Sbjct: 1 MHPTYSAVQARLLEANRLSPELLAKSLCIIGAHHVDYADIYCQRTAYESWHLEEGIVKSG 60
Query: 318 NFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKI 377
+F INQGVGVRA+SGDKTAF Y+D + +++ + ++ R+I + GK+ K + +
Sbjct: 61 SFQINQGVGVRAVSGDKTAFAYADSLCIDSINRSARAVRAI-GAAGGKVSA-KMPSETRG 118
Query: 378 NSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIV 437
+ S +D I+ ++ K+ LL +VE IA+ DPR+++V+A L+ EYD++ I R DG
Sbjct: 119 KPVCSASDPIAGLDSAAKVALLNKVEAIAKAADPRIVQVMAGLTCEYDMVYIARLDGKHA 178
Query: 438 ADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAK 497
ADIRP+V++ VT+I ++ RRE G++G GGRY+ YF + ++ + V ++V AL NLE++
Sbjct: 179 ADIRPMVRMNVTVIAKQGERREQGSAGGGGRYDLAYFDENLVHRFVDSAVKQALTNLESR 238
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
PAPAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+R+A+K +T+VD G
Sbjct: 239 PAPAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKGTSVFSGRIGERVAAKGVTVVDQGD 298
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
+A RRGS+NIDDEGN T+ T LIE+GIL GYMQD NARL TGN RRES+A P+P
Sbjct: 299 IAGRRGSLNIDDEGNETRRTVLIEDGILVGYMQDETNARLTGTQSTGNGRRESYASAPMP 358
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNT+M NG + PEEII+S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++ G++ YP
Sbjct: 359 RMTNTFMENGSYEPEEIIASIDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEGGRLQYP 418
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS-ITVGGT 736
VKGAT+IG+GP +LK VSMIGND LD GVGVCGK+GQ VPVGVGQPTL+ID+ +TVGG+
Sbjct: 419 VKGATIIGNGPEVLKHVSMIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAGLTVGGS 478
>gi|161869125|ref|YP_001598291.1| TldD -like protein [Neisseria meningitidis 053442]
gi|421907836|ref|ZP_16337704.1| tldD-like protein [Neisseria meningitidis alpha704]
gi|161594678|gb|ABX72338.1| TldD -like protein [Neisseria meningitidis 053442]
gi|393291034|emb|CCI73712.1| tldD-like protein [Neisseria meningitidis alpha704]
Length = 494
Score = 550 bits (1417), Expect = e-153, Method: Compositional matrix adjust.
Identities = 267/486 (54%), Positives = 357/486 (73%), Gaps = 4/486 (0%)
Query: 253 LISQKNIHPLNIA-RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEE 311
+ +HP A ++ LLE L ++L K L + + VDYAD Y Q T E+W LEE
Sbjct: 9 FLCADTMHPTYSAVQARLLEANRLSPELLAKSLCIIGAHHVDYADIYCQRTAYESWHLEE 68
Query: 312 GIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKN 371
GIVK+G+F INQGVGVRA+SGDKTAF Y+D + +++ + ++ R+I + GK+ K
Sbjct: 69 GIVKSGSFQINQGVGVRAVSGDKTAFAYADSLCIDSINRSARAVRAI-GAAGGKVSA-KM 126
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ + + S +D I+ ++ K+ LL +VE IA+ DPR+++V+A L+ EYD++ + R
Sbjct: 127 PSETRGKPVCSASDPIAGLDSAAKVALLNKVEAIAKAADPRIVQVMAGLTCEYDMVYLAR 186
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
DG ADIRP+V+L VT+I ++ RRE G++G GGRY+ YF + ++ + V +V AL
Sbjct: 187 LDGKHAADIRPMVRLNVTVIAKQGERREQGSAGGGGRYDLAYFDENLVRQFVDAAVKQAL 246
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
NLE++PAPAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+R+A+K +T
Sbjct: 247 TNLESRPAPAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKGTSVFSGRIGERVAAKGVT 306
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD G +A RRGS+NIDDEGN T+ T LIE+GIL GYMQD NARL TGN RRES+
Sbjct: 307 VVDQGDIAGRRGSLNIDDEGNETRRTVLIEDGILTGYMQDETNARLTGTQSTGNGRRESY 366
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A P+PRMTNT+M NG + PEEII+S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++
Sbjct: 367 ASAPMPRMTNTFMENGSYEPEEIIASIDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEG 426
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS- 730
G++ YPVKGAT+IG+GP +LK VSMIGND LD GVGVCGK+GQ VPVGVGQPTL+ID+
Sbjct: 427 GRLQYPVKGATIIGNGPEVLKHVSMIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAG 486
Query: 731 ITVGGT 736
+TVGG+
Sbjct: 487 LTVGGS 492
>gi|354598576|ref|ZP_09016593.1| peptidase U62 modulator of DNA gyrase [Brenneria sp. EniD312]
gi|353676511|gb|EHD22544.1| peptidase U62 modulator of DNA gyrase [Brenneria sp. EniD312]
Length = 481
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 260/472 (55%), Positives = 349/472 (73%), Gaps = 2/472 (0%)
Query: 267 SILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVG 326
S L F L+ K L L ++ + +VDYAD YFQ + E+W LE GIV+ FS +QG+G
Sbjct: 11 SPALTAFSLETKALGHALNHIMQRQVDYADLYFQRRQQESWQLENGIVRPTGFSRDQGIG 70
Query: 327 VRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSLYSFTD 385
VRA+SG+KTAF Y+++IS L+NA + R I Q N + + ++ + I SLY +
Sbjct: 71 VRAVSGEKTAFSYTNNISAAALLNAAGTVREITRQGQNASVALPASLPQ-GITSLYPQDN 129
Query: 386 TISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQ 445
++SI R+K LL +++ A+ +DPRV +V A L Y+ ILI R+DG + D+RPLV
Sbjct: 130 PLTSITERQKCDLLASIDRQAKARDPRVTRVSAYLGASYETILIARHDGKLATDVRPLVN 189
Query: 446 LFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMK 505
L + ++ E+ GRRE G+SG G R +Y +F + + V +V+ AL NLEA PAPAG
Sbjct: 190 LTIAVVAEQQGRRETGSSGGGRRLDYRFFDAESVTRWVCKAVDQALNNLEAGPAPAGTYS 249
Query: 506 VVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSI 565
VVLG G PGILLHEAIGHGLEGDFNRKGSSAFSN +G+R+A+K IT+VD+GT+A+RRGS+
Sbjct: 250 VVLGAGSPGILLHEAIGHGLEGDFNRKGSSAFSNLLGERVAAKGITVVDDGTMASRRGSL 309
Query: 566 NIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYML 625
++DDEG PTQ T LIE+GIL+GY+QD +NA LMN ++TGNARR S+A +P+PRMTNTYML
Sbjct: 310 HVDDEGTPTQTTALIEDGILRGYLQDSLNAMLMNAALTGNARRTSYASLPLPRMTNTYML 369
Query: 626 NGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIG 685
G++ +EII+SVKNG+YA FSGGQVDI++GK+VF+ ++AY+I+NGKIT PVKGATLIG
Sbjct: 370 AGQYPADEIIASVKNGVYAAGFSGGQVDISSGKYVFATTEAYLIENGKITRPVKGATLIG 429
Query: 686 HGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
HGP L VSM+GN++ LD G C K+GQ +PV VGQPTL+ID++TVGG+
Sbjct: 430 HGPEALLHVSMVGNNLALDEGNISCSKEGQTLPVSVGQPTLRIDNMTVGGSQ 481
>gi|416198667|ref|ZP_11619034.1| protein TldD [Neisseria meningitidis CU385]
gi|421545394|ref|ZP_15991457.1| U62 family peptidase 2 TldD [Neisseria meningitidis NM140]
gi|421547443|ref|ZP_15993478.1| U62 family peptidase 2 TldD [Neisseria meningitidis NM183]
gi|421549476|ref|ZP_15995489.1| U62 family peptidase 2 TldD [Neisseria meningitidis NM2781]
gi|421553628|ref|ZP_15999587.1| U62 family peptidase 2 TldD [Neisseria meningitidis NM576]
gi|427828173|ref|ZP_18995191.1| modulator of DNA gyrase family protein [Neisseria meningitidis
H44/76]
gi|433466050|ref|ZP_20423518.1| modulator of DNA gyrase family protein [Neisseria meningitidis
NM422]
gi|433489244|ref|ZP_20446390.1| modulator of DNA gyrase family protein [Neisseria meningitidis
M13255]
gi|433491425|ref|ZP_20448534.1| modulator of DNA gyrase family protein [Neisseria meningitidis
NM418]
gi|433505979|ref|ZP_20462907.1| modulator of DNA gyrase family protein [Neisseria meningitidis
9506]
gi|433508060|ref|ZP_20464954.1| modulator of DNA gyrase family protein [Neisseria meningitidis
9757]
gi|433510212|ref|ZP_20467066.1| modulator of DNA gyrase family protein [Neisseria meningitidis
12888]
gi|433512273|ref|ZP_20469081.1| modulator of DNA gyrase family protein [Neisseria meningitidis
4119]
gi|316983956|gb|EFV62935.1| modulator of DNA gyrase family protein [Neisseria meningitidis
H44/76]
gi|325139389|gb|EGC61929.1| protein TldD [Neisseria meningitidis CU385]
gi|402320753|gb|EJU56234.1| U62 family peptidase 2 TldD [Neisseria meningitidis NM183]
gi|402320941|gb|EJU56421.1| U62 family peptidase 2 TldD [Neisseria meningitidis NM140]
gi|402323183|gb|EJU58629.1| U62 family peptidase 2 TldD [Neisseria meningitidis NM2781]
gi|402327448|gb|EJU62836.1| U62 family peptidase 2 TldD [Neisseria meningitidis NM576]
gi|432200252|gb|ELK56349.1| modulator of DNA gyrase family protein [Neisseria meningitidis
NM422]
gi|432220174|gb|ELK75999.1| modulator of DNA gyrase family protein [Neisseria meningitidis
M13255]
gi|432225177|gb|ELK80930.1| modulator of DNA gyrase family protein [Neisseria meningitidis
NM418]
gi|432238503|gb|ELK94069.1| modulator of DNA gyrase family protein [Neisseria meningitidis
9506]
gi|432238642|gb|ELK94207.1| modulator of DNA gyrase family protein [Neisseria meningitidis
9757]
gi|432244456|gb|ELK99944.1| modulator of DNA gyrase family protein [Neisseria meningitidis
12888]
gi|432244634|gb|ELL00119.1| modulator of DNA gyrase family protein [Neisseria meningitidis
4119]
Length = 494
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 267/486 (54%), Positives = 357/486 (73%), Gaps = 4/486 (0%)
Query: 253 LISQKNIHPLNIA-RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEE 311
+ +HP A ++ LLE L ++L K L + + VDYAD Y Q T E+W LEE
Sbjct: 9 FLCADTMHPTYSAVQARLLEANRLSPELLAKSLCIIGAHHVDYADIYCQRTAYESWHLEE 68
Query: 312 GIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKN 371
GIVK+G+F INQGVGVRA+SGDKTAF Y+D + +++ + ++ R+I + GK+ K
Sbjct: 69 GIVKSGSFQINQGVGVRAVSGDKTAFAYADSLCIDSINRSARAVRAI-GAAGGKVSA-KM 126
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ + + S +D I+ ++ K+ LL +VE IA+ DPR+++V+A L+ EYD++ + R
Sbjct: 127 PSETRGKPVCSASDPIAGLDSAAKVALLNKVEAIAKAADPRIVQVMAGLTCEYDMVYLAR 186
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
DG ADIRP+V+L VT+I ++ RRE G++G GGRY+ YF + ++ + V +V AL
Sbjct: 187 LDGKHAADIRPMVRLNVTVIAKQGERREQGSAGGGGRYDLAYFDENLVHRFVDAAVKQAL 246
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
NLE++PAPAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+R+A+K +T
Sbjct: 247 TNLESRPAPAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKGTSVFSGRIGERVAAKGVT 306
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD G +A RRGS+NIDDEGN T+ T LIE+GIL GYMQD NARL TGN RRES+
Sbjct: 307 VVDQGDIAGRRGSLNIDDEGNETRRTVLIEDGILVGYMQDETNARLTGTQSTGNGRRESY 366
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A P+PRMTNT+M NG + PEEII+S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++
Sbjct: 367 ASAPMPRMTNTFMENGSYEPEEIIASIDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEG 426
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS- 730
G++ YPVKGAT+IG+GP +LK VSMIGND LD GVGVCGK+GQ VPVGVGQPTL+ID+
Sbjct: 427 GRLQYPVKGATIIGNGPEVLKHVSMIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAG 486
Query: 731 ITVGGT 736
+TVGG+
Sbjct: 487 LTVGGS 492
>gi|218767363|ref|YP_002341875.1| TLDD protein-like protein [Neisseria meningitidis Z2491]
gi|385325003|ref|YP_005879442.1| putative TldD-like peptidase [Neisseria meningitidis 8013]
gi|416165288|ref|ZP_11607412.1| protein TldD [Neisseria meningitidis N1568]
gi|416185156|ref|ZP_11613330.1| protein TldD [Neisseria meningitidis M13399]
gi|421541330|ref|ZP_15987456.1| U62 family peptidase 2 TldD [Neisseria meningitidis 93004]
gi|421551588|ref|ZP_15997575.1| U62 family peptidase 2 TldD [Neisseria meningitidis 69166]
gi|433476498|ref|ZP_20433829.1| modulator of DNA gyrase family protein [Neisseria meningitidis
88050]
gi|433480832|ref|ZP_20438109.1| modulator of DNA gyrase family protein [Neisseria meningitidis
63041]
gi|433514388|ref|ZP_20471170.1| modulator of DNA gyrase family protein [Neisseria meningitidis
63049]
gi|433516599|ref|ZP_20473357.1| modulator of DNA gyrase family protein [Neisseria meningitidis
2004090]
gi|433518699|ref|ZP_20475433.1| modulator of DNA gyrase family protein [Neisseria meningitidis
96023]
gi|433520752|ref|ZP_20477460.1| modulator of DNA gyrase family protein [Neisseria meningitidis
65014]
gi|433524897|ref|ZP_20481549.1| modulator of DNA gyrase family protein [Neisseria meningitidis
97020]
gi|433529173|ref|ZP_20485778.1| modulator of DNA gyrase family protein [Neisseria meningitidis
NM3652]
gi|433531348|ref|ZP_20487925.1| modulator of DNA gyrase family protein [Neisseria meningitidis
NM3642]
gi|433533382|ref|ZP_20489938.1| modulator of DNA gyrase family protein [Neisseria meningitidis
2007056]
gi|433535503|ref|ZP_20492028.1| modulator of DNA gyrase family protein [Neisseria meningitidis
2001212]
gi|433541943|ref|ZP_20498381.1| modulator of DNA gyrase family protein [Neisseria meningitidis
63006]
gi|121051371|emb|CAM07662.1| TLDD protein homolog [Neisseria meningitidis Z2491]
gi|261393390|emb|CAX51026.1| putative TldD-like peptidase [Neisseria meningitidis 8013]
gi|325127343|gb|EGC50278.1| protein TldD [Neisseria meningitidis N1568]
gi|325133244|gb|EGC55910.1| protein TldD [Neisseria meningitidis M13399]
gi|402314853|gb|EJU50421.1| U62 family peptidase 2 TldD [Neisseria meningitidis 93004]
gi|402326595|gb|EJU61994.1| U62 family peptidase 2 TldD [Neisseria meningitidis 69166]
gi|432207356|gb|ELK63346.1| modulator of DNA gyrase family protein [Neisseria meningitidis
88050]
gi|432213250|gb|ELK69175.1| modulator of DNA gyrase family protein [Neisseria meningitidis
63041]
gi|432245350|gb|ELL00820.1| modulator of DNA gyrase family protein [Neisseria meningitidis
63049]
gi|432250785|gb|ELL06165.1| modulator of DNA gyrase family protein [Neisseria meningitidis
2004090]
gi|432250860|gb|ELL06237.1| modulator of DNA gyrase family protein [Neisseria meningitidis
96023]
gi|432251368|gb|ELL06737.1| modulator of DNA gyrase family protein [Neisseria meningitidis
65014]
gi|432257399|gb|ELL12699.1| modulator of DNA gyrase family protein [Neisseria meningitidis
97020]
gi|432263527|gb|ELL18744.1| modulator of DNA gyrase family protein [Neisseria meningitidis
NM3652]
gi|432263798|gb|ELL19009.1| modulator of DNA gyrase family protein [Neisseria meningitidis
NM3642]
gi|432264696|gb|ELL19895.1| modulator of DNA gyrase family protein [Neisseria meningitidis
2007056]
gi|432269093|gb|ELL24256.1| modulator of DNA gyrase family protein [Neisseria meningitidis
2001212]
gi|432275014|gb|ELL30092.1| modulator of DNA gyrase family protein [Neisseria meningitidis
63006]
Length = 480
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 267/480 (55%), Positives = 356/480 (74%), Gaps = 4/480 (0%)
Query: 259 IHPLNIA-RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTG 317
+HP A ++ LLE L ++L K L + + VDYAD Y Q T E+W LEEGIVK+G
Sbjct: 1 MHPTYSAVQARLLEANRLSPELLAKSLCIIGAHHVDYADIYCQRTAYESWHLEEGIVKSG 60
Query: 318 NFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKI 377
+F INQGVGVRA+SGDKTAF Y+D + +++ + ++ R+I + GK+ K + +
Sbjct: 61 SFQINQGVGVRAVSGDKTAFAYADSLCIDSINRSARAVRAI-GAAGGKVSA-KMPSETRG 118
Query: 378 NSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIV 437
+ S +D I+ ++ K+ LL +VE IA+ DPR+++V+A L+ EYD++ + R DG
Sbjct: 119 KPVCSASDPIAGLDSAAKVALLNKVEAIAKAADPRIVQVMAGLTCEYDMVYLARLDGKHA 178
Query: 438 ADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAK 497
ADIRP+V+L VT+I ++ RRE G++G GGRY+ YF + ++ + V +V AL NLE++
Sbjct: 179 ADIRPMVRLNVTVIAKQGERREQGSAGGGGRYDLAYFDENLVRQFVDAAVKQALTNLESR 238
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
PAPAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+R+A+K +T+VD G
Sbjct: 239 PAPAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKGTSVFSGRIGERVAAKGVTVVDQGD 298
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
+A RRGS+NIDDEGN T+ T LIE+GIL GYMQD NARL TGN RRES+A P+P
Sbjct: 299 IAGRRGSLNIDDEGNETRRTVLIEDGILVGYMQDETNARLTGTQSTGNGRRESYASAPMP 358
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNT+M NG + PEEII+S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++ G++ YP
Sbjct: 359 RMTNTFMENGSYEPEEIIASIDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEGGRLQYP 418
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS-ITVGGT 736
VKGAT+IG+GP +LK VSMIGND LD GVGVCGK+GQ VPVGVGQPTL+ID+ +TVGG+
Sbjct: 419 VKGATIIGNGPEVLKHVSMIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAGLTVGGS 478
>gi|15677888|ref|NP_275056.1| tldD protein [Neisseria meningitidis MC58]
gi|385854110|ref|YP_005900624.1| protein TldD [Neisseria meningitidis H44/76]
gi|421562101|ref|ZP_16007937.1| modulator of DNA gyrase family protein [Neisseria meningitidis
NM2657]
gi|7227328|gb|AAF42385.1| tldD protein [Neisseria meningitidis MC58]
gi|325201114|gb|ADY96569.1| protein TldD [Neisseria meningitidis H44/76]
gi|402335490|gb|EJU70755.1| modulator of DNA gyrase family protein [Neisseria meningitidis
NM2657]
Length = 480
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 267/480 (55%), Positives = 356/480 (74%), Gaps = 4/480 (0%)
Query: 259 IHPLNIA-RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTG 317
+HP A ++ LLE L ++L K L + + VDYAD Y Q T E+W LEEGIVK+G
Sbjct: 1 MHPTYSAVQARLLEANRLSPELLAKSLCIIGAHHVDYADIYCQRTAYESWHLEEGIVKSG 60
Query: 318 NFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKI 377
+F INQGVGVRA+SGDKTAF Y+D + +++ + ++ R+I + GK+ K + +
Sbjct: 61 SFQINQGVGVRAVSGDKTAFAYADSLCIDSINRSARAVRAI-GAAGGKVSA-KMPSETRG 118
Query: 378 NSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIV 437
+ S +D I+ ++ K+ LL +VE IA+ DPR+++V+A L+ EYD++ + R DG
Sbjct: 119 KPVCSASDPIAGLDSAAKVALLNKVEAIAKAADPRIVQVMAGLTCEYDMVYLARLDGKHA 178
Query: 438 ADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAK 497
ADIRP+V+L VT+I ++ RRE G++G GGRY+ YF + ++ + V +V AL NLE++
Sbjct: 179 ADIRPMVRLNVTVIAKQGERREQGSAGGGGRYDLAYFDENLVHRFVDAAVKQALTNLESR 238
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
PAPAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+R+A+K +T+VD G
Sbjct: 239 PAPAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKGTSVFSGRIGERVAAKGVTVVDQGD 298
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
+A RRGS+NIDDEGN T+ T LIE+GIL GYMQD NARL TGN RRES+A P+P
Sbjct: 299 IAGRRGSLNIDDEGNETRRTVLIEDGILVGYMQDETNARLTGTQSTGNGRRESYASAPMP 358
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNT+M NG + PEEII+S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++ G++ YP
Sbjct: 359 RMTNTFMENGSYEPEEIIASIDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEGGRLQYP 418
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS-ITVGGT 736
VKGAT+IG+GP +LK VSMIGND LD GVGVCGK+GQ VPVGVGQPTL+ID+ +TVGG+
Sbjct: 419 VKGATIIGNGPEVLKHVSMIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAGLTVGGS 478
>gi|381151379|ref|ZP_09863248.1| putative Zn-dependent protease-like protein [Methylomicrobium album
BG8]
gi|380883351|gb|EIC29228.1| putative Zn-dependent protease-like protein [Methylomicrobium album
BG8]
Length = 479
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 270/479 (56%), Positives = 350/479 (73%), Gaps = 7/479 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+ +A+ +L+P + E + I+ + ++ D AD YFQ T+ E+W++E GI+K G+ +I
Sbjct: 4 ITLAKQAILKPSGITESEIDTIMSRLMSSRADAADIYFQSTRAESWVMEGGIIKEGSHNI 63
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QG GVRA+SGDKT F YSD I L+ AV + ++I Q+ + + ++ S Y
Sbjct: 64 AQGAGVRAVSGDKTGFAYSDRIELPVLMEAVNNVKAIVRQAQ-QASVGLSLPP-SWPSHY 121
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ D I S+ R+KI LL RVE R D R+ +VI +L G +D IL+ DG + AD+R
Sbjct: 122 APADPIRSLEDRQKIDLLRRVESETRKLDSRIEEVIVSLIGVHDHILVAGQDGALAADVR 181
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVS---NSVNSALINLEAKP 498
PLV++ VT+IV ++GRRE G+ G G R +Y YF + ++ ++ +V AL+NLEA
Sbjct: 182 PLVRMNVTVIVVQDGRREQGSMGGGARSDYRYFIEQ--DRALNYGREAVRQALVNLEAVE 239
Query: 499 APAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL 558
APAG M VVLGPGWPGILLHEAIGHGLEGDFNRKG+SAFS +G+R+AS T+VD+G L
Sbjct: 240 APAGNMTVVLGPGWPGILLHEAIGHGLEGDFNRKGTSAFSGRVGQRVASDLCTVVDDGAL 299
Query: 559 ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPR 618
RRGS+NIDDEG PT+ T LIE GILKGYMQD NARLM + TGN RRES+AH P+PR
Sbjct: 300 PGRRGSLNIDDEGTPTERTVLIEKGILKGYMQDKTNARLMGVKPTGNGRRESYAHAPMPR 359
Query: 619 MTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPV 678
MTNTYML G HPEEII SV G+YA NF GGQVDIT+GKFVFSAS+AY+I+NG+IT P+
Sbjct: 360 MTNTYMLPGPHHPEEIIRSVGKGIYAKNFGGGQVDITSGKFVFSASEAYLIENGRITRPL 419
Query: 679 KGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
KGATLIG+GP++L +VSM+GND++LD GVG CGK+GQ VPVGVGQPTLKID +TVGGT+
Sbjct: 420 KGATLIGNGPDVLTRVSMVGNDLELDSGVGTCGKEGQSVPVGVGQPTLKIDGLTVGGTS 478
>gi|421543322|ref|ZP_15989417.1| U62 family peptidase 2 TldD [Neisseria meningitidis NM255]
gi|402314968|gb|EJU50535.1| U62 family peptidase 2 TldD [Neisseria meningitidis NM255]
Length = 494
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 266/486 (54%), Positives = 358/486 (73%), Gaps = 4/486 (0%)
Query: 253 LISQKNIHPLNIA-RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEE 311
+ +HP A ++ LLE L ++L K L + + VDYAD Y Q T E+W LEE
Sbjct: 9 FLCADTMHPTYSAVQARLLEANRLSPELLAKSLCIIGAHHVDYADIYCQRTAYESWHLEE 68
Query: 312 GIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKN 371
GIVK+G+F I+QGVGVRA+SGDKTAF Y+D + +++ + ++ R+I + GK+ K
Sbjct: 69 GIVKSGSFQIDQGVGVRAVSGDKTAFAYADSLCIDSINRSARAVRAI-GAAGGKVSA-KM 126
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ + + S +D I+ ++ K+ LL +VE IA+ DPR+++V+A L+ EYD++ I R
Sbjct: 127 PSETRGKPVCSASDPIAGLDSAAKVALLNKVEAIAKAADPRIVQVMAGLTCEYDMVYIAR 186
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
DG ADIRP+V++ VT+I ++ RRE G++G GGRY+ YF + ++ + V ++V AL
Sbjct: 187 LDGKHAADIRPMVRMNVTVIAKQGERREQGSAGGGGRYDLAYFDENLVHRFVDSAVKQAL 246
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
NLE++PAPAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+R+A+K +T
Sbjct: 247 TNLESRPAPAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKGTSVFSGRIGERVAAKGVT 306
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD G +A RRGS+NIDDEGN T+ T LIE+GIL GYMQD NARL TGN RRES+
Sbjct: 307 VVDQGDIAGRRGSLNIDDEGNETRRTVLIEDGILVGYMQDETNARLTGTQSTGNGRRESY 366
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A P+PRMTNT+M NG + PEEII+S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++
Sbjct: 367 ASAPMPRMTNTFMENGSYEPEEIIASIDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEG 426
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS- 730
G++ YPVKGAT+IG+GP +LK VSMIGND LD GVGVCGK+GQ VPVGVGQPTL+ID+
Sbjct: 427 GRLQYPVKGATIIGNGPEVLKHVSMIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAG 486
Query: 731 ITVGGT 736
+TVGG+
Sbjct: 487 LTVGGS 492
>gi|253991170|ref|YP_003042526.1| tldd protein, suppresses the inhibitory activity of the carbon
storage regulator (csra) [Photorhabdus asymbiotica]
gi|253782620|emb|CAQ85784.1| tldd protein, suppresses the inhibitory activity of the carbon
storage regulator (csra) [Photorhabdus asymbiotica]
Length = 481
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 273/474 (57%), Positives = 361/474 (76%), Gaps = 9/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL L + L +LG + + ++DYAD YFQ + +E+W+LE+ I+K G+++I+QGVGVR
Sbjct: 10 LLAANKLSHQDLFSVLGQLAERRLDYADLYFQSSYHESWVLEDRIIKDGSYNIDQGVGVR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSLYSFTDTI 387
AISG+KT F Y+D I+ N L +V++ RSI ++ NGK+ + ++ + LY+ +D +
Sbjct: 70 AISGEKTGFAYADQITLNALQQSVQAARSIVHEKGNGKVH---TLGEVAYSRLYAASDPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S + EKI LL+RV+++AR +DPRV +V A+L+G Y+ +L+ DG + ADIRP+V+L
Sbjct: 127 QSFSREEKIALLQRVDQVARAEDPRVQEVNASLTGIYERVLVAATDGTLAADIRPMVRLS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLEAKPAPAG 502
V+++VE NG+RE G SG GGRY Y YF +M+ E+ +V AL+NL A APAG
Sbjct: 187 VSVLVEDNGKREHGTSGGGGRYGYEYFLEMVGGQDRAEQFAREAVRMALVNLSAVAAPAG 246
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IGK++AS+ T+VD+GT+ RR
Sbjct: 247 TMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQIGKKVASELCTVVDDGTIKGRR 306
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+ IDDEG P Q LIENGILKGYMQD MNARLM ++ TGN RRES+AH+P+PRMTNT
Sbjct: 307 GSLAIDDEGVPGQYNVLIENGILKGYMQDKMNARLMGVAPTGNGRRESYAHLPMPRMTNT 366
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
Y+L G PEEII SV+NGLYA NF GGQVDIT+GKFVFS S+AY+I+NGKIT PVKGAT
Sbjct: 367 YLLAGNSTPEEIIGSVENGLYAPNFGGGQVDITSGKFVFSTSEAYLIENGKITKPVKGAT 426
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
LIG G ++++SM+GND+ LD GVGVCGK+GQ VPVGVGQPTLK+D++TVGGT
Sbjct: 427 LIGSGIEAMQQISMVGNDLDLDKGVGVCGKEGQSVPVGVGQPTLKLDNLTVGGT 480
>gi|407793188|ref|ZP_11140223.1| Zn-dependent protease [Idiomarina xiamenensis 10-D-4]
gi|407215548|gb|EKE85387.1| Zn-dependent protease [Idiomarina xiamenensis 10-D-4]
Length = 483
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 264/476 (55%), Positives = 345/476 (72%), Gaps = 10/476 (2%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL L + L + L ++ +D+AD Y Q ++NE+W+LE+GIVK G+F I G+GVR
Sbjct: 11 LLTQHQLSTEQLQQSLAKVYSGAIDFADIYLQSSRNESWVLEDGIVKDGSFHIETGLGVR 70
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSLYSFTDTI 387
A+ GDKT F Y+D+IS L A K+ R I Q GK+K+++++ + Y D +
Sbjct: 71 AVYGDKTGFAYADEISLAALETAAKAARGITQQGQQGKLKVLQSVTA---EARYGAIDPL 127
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
++ EKI+LL ++ AR D RV +VI +LSG YD +L+ +DG + D RPLV++
Sbjct: 128 QTLTEAEKIQLLRDADQFARQLDARVSQVIVSLSGSYDDVLVAASDGTLATDSRPLVRMN 187
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYFTDMI------LEKCVSNSVNSALINLEAKPAPA 501
+++VE NGRRE G+SG G R Y +F + V +V AL+NLEA+PAPA
Sbjct: 188 CSVLVEHNGRRERGSSGGGARLGYRFFLQQDSKQQPRWQHYVKEAVRMALVNLEARPAPA 247
Query: 502 GIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANR 561
G M VVLG GWPG+LLHEA+GHGLEGDFNRK SSA+S IG+++AS TIVD+GTL +R
Sbjct: 248 GTMPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSAYSGKIGEKVASSLCTIVDDGTLNDR 307
Query: 562 RGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTN 621
RGS++IDDEG LIENG+LKGYMQD +NARLM M+ TGN RRES+AH+P+PRMTN
Sbjct: 308 RGSLSIDDEGTAAGYNVLIENGVLKGYMQDKLNARLMGMAATGNGRRESYAHLPMPRMTN 367
Query: 622 TYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGA 681
TYML G+ PEEII SVK G+YA F+GGQVDIT+GKFVFSAS+AY+I++GK+T P+KGA
Sbjct: 368 TYMLAGESDPEEIIGSVKRGIYAPQFAGGQVDITSGKFVFSASEAYLIEDGKLTVPLKGA 427
Query: 682 TLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
TLIG+GP + +VSM+GND+ LD GVGVCGKDGQ VPVGVGQPTLK+D++TVGGT
Sbjct: 428 TLIGNGPQAMSQVSMVGNDLALDEGVGVCGKDGQSVPVGVGQPTLKLDAMTVGGTE 483
>gi|254804123|ref|YP_003082344.1| TldD protein [Neisseria meningitidis alpha14]
gi|385337210|ref|YP_005891083.1| putative TldD-like peptidase [Neisseria meningitidis WUE 2594]
gi|433472321|ref|ZP_20429697.1| modulator of DNA gyrase family protein [Neisseria meningitidis
68094]
gi|433474397|ref|ZP_20431749.1| modulator of DNA gyrase family protein [Neisseria meningitidis
97021]
gi|433478623|ref|ZP_20435929.1| modulator of DNA gyrase family protein [Neisseria meningitidis
70012]
gi|433482828|ref|ZP_20440078.1| modulator of DNA gyrase family protein [Neisseria meningitidis
2006087]
gi|433484841|ref|ZP_20442055.1| modulator of DNA gyrase family protein [Neisseria meningitidis
2002038]
gi|433487072|ref|ZP_20444259.1| modulator of DNA gyrase family protein [Neisseria meningitidis
97014]
gi|433527162|ref|ZP_20483779.1| modulator of DNA gyrase family protein [Neisseria meningitidis
69096]
gi|433539830|ref|ZP_20496294.1| modulator of DNA gyrase family protein [Neisseria meningitidis
70030]
gi|254667665|emb|CBA03494.1| TldD protein [Neisseria meningitidis alpha14]
gi|319409624|emb|CBY89923.1| putative TldD-like peptidase [Neisseria meningitidis WUE 2594]
gi|432206274|gb|ELK62283.1| modulator of DNA gyrase family protein [Neisseria meningitidis
68094]
gi|432207053|gb|ELK63048.1| modulator of DNA gyrase family protein [Neisseria meningitidis
97021]
gi|432212903|gb|ELK68834.1| modulator of DNA gyrase family protein [Neisseria meningitidis
70012]
gi|432213666|gb|ELK69577.1| modulator of DNA gyrase family protein [Neisseria meningitidis
2006087]
gi|432219078|gb|ELK74926.1| modulator of DNA gyrase family protein [Neisseria meningitidis
2002038]
gi|432220057|gb|ELK75884.1| modulator of DNA gyrase family protein [Neisseria meningitidis
97014]
gi|432257979|gb|ELL13271.1| modulator of DNA gyrase family protein [Neisseria meningitidis
69096]
gi|432270875|gb|ELL26008.1| modulator of DNA gyrase family protein [Neisseria meningitidis
70030]
Length = 494
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 267/486 (54%), Positives = 357/486 (73%), Gaps = 4/486 (0%)
Query: 253 LISQKNIHPLNIA-RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEE 311
+ +HP A ++ LLE L ++L K L + + VDYAD Y Q T E+W LEE
Sbjct: 9 FLCADTMHPTYSAVQARLLEANRLSPELLAKSLCIIGAHHVDYADIYCQRTAYESWHLEE 68
Query: 312 GIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKN 371
GIVK+G+F INQGVGVRA+SGDKTAF Y+D + +++ + ++ R+I + GK+ K
Sbjct: 69 GIVKSGSFQINQGVGVRAVSGDKTAFAYADSLCIDSINRSARAVRAI-GAAGGKVSA-KM 126
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ + + S +D I+ ++ K+ LL +VE IA+ DPR+++V+A L+ EYD++ + R
Sbjct: 127 PSETRGKPVCSASDPIAGLDSAAKVALLNKVEAIAKAADPRIVQVMAGLTCEYDMVYLAR 186
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
DG ADIRP+V+L VT+I ++ RRE G++G GGRY+ YF + ++ + V +V AL
Sbjct: 187 LDGKHAADIRPMVRLNVTVIAKQGERREQGSAGGGGRYDLAYFDENLVRQFVDAAVKQAL 246
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
NLE++PAPAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+R+A+K +T
Sbjct: 247 TNLESRPAPAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKGTSVFSGRIGERVAAKGVT 306
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD G +A RRGS+NIDDEGN T+ T LIE+GIL GYMQD NARL TGN RRES+
Sbjct: 307 VVDQGDIAGRRGSLNIDDEGNETRRTVLIEDGILVGYMQDETNARLTGTQSTGNGRRESY 366
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A P+PRMTNT+M NG + PEEII+S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++
Sbjct: 367 ASAPMPRMTNTFMENGSYEPEEIIASIDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEG 426
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS- 730
G++ YPVKGAT+IG+GP +LK VSMIGND LD GVGVCGK+GQ VPVGVGQPTL+ID+
Sbjct: 427 GRLQYPVKGATIIGNGPEVLKHVSMIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAG 486
Query: 731 ITVGGT 736
+TVGG+
Sbjct: 487 LTVGGS 492
>gi|421863167|ref|ZP_16294867.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309379289|emb|CBX22062.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 480
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 267/480 (55%), Positives = 356/480 (74%), Gaps = 4/480 (0%)
Query: 259 IHPLNIA-RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTG 317
+HP A R LLE L ++L K L + + VDYAD Y Q T E+W LEEGIVK+G
Sbjct: 1 MHPTYSAVRERLLEANRLSPELLAKSLCIIGAHHVDYADIYCQRTAYESWHLEEGIVKSG 60
Query: 318 NFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKI 377
+F I+QGVGVRA+SGDKTAF Y+D + +++ + ++ R+I + GK+ K + +
Sbjct: 61 SFQIDQGVGVRAVSGDKTAFAYADSLCIDSINRSARAVRAI-GAAGGKVSA-KMPSETRG 118
Query: 378 NSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIV 437
+ S +D I+ ++ K+ LL +VE IA+ DPR+++V+A L+ EYD++ + R DG
Sbjct: 119 KPVCSASDPIAGLDSAAKVALLNKVEAIAKAADPRIVQVMAGLTCEYDMVYLARLDGKHA 178
Query: 438 ADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAK 497
ADIRP+V+L VT+I ++ RRE G++G GGRY+ YF + ++ + V +V AL NLE++
Sbjct: 179 ADIRPMVRLNVTVIAKQGERREQGSAGGGGRYDLAYFDEKLIHRFVDAAVKQALTNLESR 238
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
PAPAG M VVLG GWPG+LLHEA+GHGLEGDFNRK +S FS IG+R+A+K +T+VD G
Sbjct: 239 PAPAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKETSVFSGRIGERVAAKGVTVVDQGD 298
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
+A+RRGS+NIDDEGN T+ T LIE+GIL GYMQD NARL TGN RRES+A +P+P
Sbjct: 299 IADRRGSLNIDDEGNETRRTVLIEDGILVGYMQDETNARLTGTQSTGNGRRESYASVPMP 358
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNT+M NG + PEEII+S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++ GK+ YP
Sbjct: 359 RMTNTFMENGGYEPEEIIASIDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEGGKLQYP 418
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS-ITVGGT 736
VKGAT+IG+GP +LK VSMIGND LD GVGVCGK+GQ VPVGVGQPTL+ID+ +TVGG+
Sbjct: 419 VKGATIIGNGPEVLKHVSMIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAGLTVGGS 478
>gi|421567904|ref|ZP_16013635.1| U62 family peptidase 2 TldD [Neisseria meningitidis NM3001]
gi|402342849|gb|EJU78005.1| U62 family peptidase 2 TldD [Neisseria meningitidis NM3001]
Length = 480
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 267/481 (55%), Positives = 356/481 (74%), Gaps = 4/481 (0%)
Query: 259 IHPLNIA-RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTG 317
+HP A ++ LLE L ++L K L + + VDYAD Y Q T E+W LEEGIVK+G
Sbjct: 1 MHPTYSAVQARLLEANRLSPELLAKSLCIIGAHHVDYADIYCQRTAYESWHLEEGIVKSG 60
Query: 318 NFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKI 377
+F INQGVGVRA+SGDKTAF Y+D + +++ + ++ R+I + GK+ K + +
Sbjct: 61 SFQINQGVGVRAVSGDKTAFAYADSLCIDSINRSARAVRAI-GAAGGKVSA-KMPSETRG 118
Query: 378 NSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIV 437
+ S +D I+ ++ K+ LL +VE IA+ DPR+++V+A L+ EYD++ + R DG
Sbjct: 119 KPVCSASDPIAGLDSAAKVALLNKVEAIAKAADPRIVQVMAGLTCEYDMVYLARLDGKHA 178
Query: 438 ADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAK 497
ADIRP+V+L VT+I ++ RRE G++G GGRY+ YF + ++ + V +V AL NLE++
Sbjct: 179 ADIRPMVRLNVTVIAKQGERREQGSAGGGGRYDLAYFDENLVRQFVDAAVKQALTNLESR 238
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
PAPAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+R+A+K +T+VD G
Sbjct: 239 PAPAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKGTSVFSGRIGERVAAKGVTVVDQGD 298
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
+A+RRGS+NIDDEGN T+ T LIE+GIL GYMQD NARL TGN RRES+A P+P
Sbjct: 299 IASRRGSLNIDDEGNETRRTVLIEDGILVGYMQDETNARLTGTQSTGNGRRESYASAPMP 358
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNT+M NG + PEEII+S+ G+YA NF GGQVDIT GKFVFSAS+A+ ++ G++ YP
Sbjct: 359 RMTNTFMENGSYEPEEIIASIDKGIYAVNFGGGQVDITGGKFVFSASEAWWVEGGRLQYP 418
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS-ITVGGT 736
VKGAT+IG+GP +LK VSMIGND LD GVGVCGK+GQ VPVGVGQPTL+ID+ +TVGG+
Sbjct: 419 VKGATIIGNGPEVLKHVSMIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAGLTVGGS 478
Query: 737 N 737
Sbjct: 479 E 479
>gi|421555746|ref|ZP_16001671.1| U62 family peptidase 2 TldD [Neisseria meningitidis 98008]
gi|402328722|gb|EJU64088.1| U62 family peptidase 2 TldD [Neisseria meningitidis 98008]
Length = 480
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 267/480 (55%), Positives = 357/480 (74%), Gaps = 4/480 (0%)
Query: 259 IHPLNIA-RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTG 317
+HP A ++ LLE L ++L K L + + VDYAD Y Q T E+W LEEGIVK+G
Sbjct: 1 MHPTYSAVQARLLEANRLSPELLAKSLCIIGAHHVDYADIYCQRTAYESWHLEEGIVKSG 60
Query: 318 NFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKI 377
+F INQGVGVRA+SGDKTAF Y+D + +++ + ++ R+I + GK+ K + +
Sbjct: 61 SFQINQGVGVRAVSGDKTAFAYADSLCIDSINRSARAVRAI-GAAGGKVSA-KMPSETRG 118
Query: 378 NSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIV 437
+ S +D I+ ++ K+ LL +VE IA+ DPR+++V+A L+ EYD++ + R DG
Sbjct: 119 KPVCSASDPIAGLDSAAKVALLNKVEAIAKAADPRIVQVMAGLTCEYDMVYLARLDGKHA 178
Query: 438 ADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAK 497
ADIRP+V+L VT+I ++ RRE G++G GGRY+ YF + ++ + V +V AL NLE++
Sbjct: 179 ADIRPMVRLNVTVIAKQGERREQGSAGGGGRYDLAYFDENLVRQFVDAAVKQALTNLESR 238
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
PAPAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+R+A+K +T+VD G
Sbjct: 239 PAPAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKGTSVFSGRIGERVAAKGVTVVDQGD 298
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
+A RRGS+NIDDEGN T+ T LIE+GIL GYMQD NARL TGN RRES+A +P+P
Sbjct: 299 IAGRRGSLNIDDEGNETRRTVLIEDGILVGYMQDETNARLTGTQSTGNGRRESYASVPMP 358
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNT+M NG + P+EII+S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++ GK+ YP
Sbjct: 359 RMTNTFMENGGYEPDEIIASIDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEGGKLQYP 418
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS-ITVGGT 736
VKGAT+IG+GP +LK VSMIGND LD GVGVCGK+GQ VPVGVGQPTL+ID+ +TVGG+
Sbjct: 419 VKGATIIGNGPEVLKHVSMIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAGLTVGGS 478
>gi|254672056|emb|CBA04661.1| TldD protein [Neisseria meningitidis alpha275]
Length = 494
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 266/486 (54%), Positives = 357/486 (73%), Gaps = 4/486 (0%)
Query: 253 LISQKNIHPLNIA-RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEE 311
+ +HP A ++ LLE L ++L K L + + VDYAD Y Q T E+W LEE
Sbjct: 9 FLCADTMHPTYSAVQARLLEANRLSPELLAKSLCIIGAHHVDYADIYCQRTAYESWHLEE 68
Query: 312 GIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKN 371
GIVK+G+F INQGVGVRA+SGDKTAF Y+D + +++ + ++ R+I + GK+ K
Sbjct: 69 GIVKSGSFQINQGVGVRAVSGDKTAFAYADSLCIDSINRSARAVRAI-GAAGGKVSA-KM 126
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ + + S +D I+ ++ K+ LL +VE IA+ DPR+++V+A L+ EYD++ + R
Sbjct: 127 PSETRGKPVCSASDPIAGLDSATKVALLNKVEAIAKAADPRIVQVMAGLTCEYDMVYLAR 186
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
DG ADIRP+V+L VT+I + RRE G++G GGRY+ YF + ++ + V ++V AL
Sbjct: 187 LDGKHAADIRPMVRLNVTVIARQGERREQGSAGGGGRYDLAYFDENLVHRFVDSAVKQAL 246
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
NLE++PAPAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+R+A+K +T
Sbjct: 247 TNLESRPAPAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKGTSVFSGRIGERVAAKGVT 306
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD G +A RRGS+NIDDEGN T+ T LIE+GIL GYMQD NARL TGN RRES+
Sbjct: 307 VVDQGDIAGRRGSLNIDDEGNETRRTVLIEDGILVGYMQDETNARLTGTQSTGNGRRESY 366
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A P+PRMTNT+M NG + PEEII+S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++
Sbjct: 367 ASAPMPRMTNTFMENGSYEPEEIIASIDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEG 426
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS- 730
G++ YPVKGAT+IG+GP +L+ VSMIGND LD GVGVCGK+GQ VPVGVGQPTL+ID+
Sbjct: 427 GRLQYPVKGATIIGNGPEVLQHVSMIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAG 486
Query: 731 ITVGGT 736
+TVGG+
Sbjct: 487 LTVGGS 492
>gi|407686017|ref|YP_006801190.1| peptidase [Alteromonas macleodii str. 'Balearic Sea AD45']
gi|407289397|gb|AFT93709.1| putative peptidase [Alteromonas macleodii str. 'Balearic Sea AD45']
Length = 480
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 257/473 (54%), Positives = 355/473 (75%), Gaps = 7/473 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL LD L + L + ++ DYAD YFQ +++E+W+LE+GI+K G+++I +GVGVR
Sbjct: 9 LLSDSGLDISKLERALSTIHRHDTDYADLYFQSSQHESWVLEDGIIKEGSYNIERGVGVR 68
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
AISG+KT F YSD+IS+ L A K+ R IA +G ++ + ++ + + + YS + I
Sbjct: 69 AISGEKTGFAYSDEISEEALTKACKAARGIA--PSGGLQQVASLGQKPVQARYSENNPIL 126
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ EKI LL+ V+ R ++P +V+ +LSG Y+ IL+ +DG + DIRPLV+L
Sbjct: 127 AMQDAEKISLLKAVDAYIRKQEPSANQVVVSLSGVYEEILVAGSDGTLATDIRPLVRLNC 186
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTD-----MILEKCVSNSVNSALINLEAKPAPAGI 503
++++E+ RRE G++G GGRY Y++F E ++++ A +N++A +PAG
Sbjct: 187 SVLLEQGDRRERGSAGAGGRYAYSFFKQNENGKPYYETLAEDALHMARVNMQAVASPAGA 246
Query: 504 MKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRG 563
M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+R+A+K +T+VD+GTL +RRG
Sbjct: 247 MPVVLGNGWPGVLLHEAVGHGLEGDFNRKGASTFSGRIGQRVAAKGVTVVDDGTLNDRRG 306
Query: 564 SINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTY 623
S+++DDEG PT LIE+GILKGYMQD NA+LM ++ TGN RRES+AH+P+PRMTNTY
Sbjct: 307 SLSVDDEGTPTAHNVLIEDGILKGYMQDKHNAKLMGVAPTGNGRRESYAHLPMPRMTNTY 366
Query: 624 MLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATL 683
ML G+ P+EII+S+ G+YA NF+GGQVDIT+GKFVFS+++AY+I+NGKIT PVKGATL
Sbjct: 367 MLEGQHEPQEIIASIDKGIYAPNFAGGQVDITSGKFVFSSAEAYLIENGKITAPVKGATL 426
Query: 684 IGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
IG+GP +++K+SMIGND LD GVGVCGKDGQ VPVGVGQPTLKID +TVGGT
Sbjct: 427 IGNGPEVMQKISMIGNDTALDKGVGVCGKDGQSVPVGVGQPTLKIDELTVGGT 479
>gi|410635957|ref|ZP_11346564.1| TldD protein [Glaciecola lipolytica E3]
gi|410144634|dbj|GAC13769.1| TldD protein [Glaciecola lipolytica E3]
Length = 481
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 260/480 (54%), Positives = 358/480 (74%), Gaps = 7/480 (1%)
Query: 263 NIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSIN 322
N+ LL DLD ++ L + +++ D+AD YFQ +++E+W+LE+GI+K G+++I
Sbjct: 3 NLVEKNLLHAADLDSGKVVSALDLICQHQNDFADIYFQSSQHESWVLEDGIIKDGSYNIE 62
Query: 323 QGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYS 382
+GVGVRA+SG+KT F YSDDIS L A ++R+IAN S G K+ + KK + + Y
Sbjct: 63 KGVGVRAVSGEKTGFAYSDDISLEALTKAATASRTIAN-SGGNFKVKASSKK-QTTARYY 120
Query: 383 FTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRP 442
+ I + +KI LL+ V+K R ++P +V+ ++SG Y+ +L+ DG DIRP
Sbjct: 121 AQNPILDMQEHQKITLLQDVDKYIRDQEPLATQVVVSISGVYEEVLVAATDGTFSTDIRP 180
Query: 443 LVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEK-----CVSNSVNSALINLEAK 497
L++L +I++E GRRE G++G GGRY Y YF +K +++ A IN++A
Sbjct: 181 LIRLNCSILIENQGRRERGSAGMGGRYGYQYFLKNEGDKPRFQLLADEAIHMARINMQAI 240
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS +GK++A+K +T+VD+GT
Sbjct: 241 DAPAGLMPVVLGAGWPGVLLHEAVGHGLEGDFNRKGASTFSGKMGKQVAAKGVTVVDDGT 300
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
LA+RRGS+++DDEG P+Q LIE+GIL GYMQD +NARLM ++ TGN RRES+AH+P+P
Sbjct: 301 LADRRGSLSVDDEGTPSQRNVLIEDGILTGYMQDKLNARLMGVNPTGNGRRESYAHLPMP 360
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNT+ML G++ PEEIISS+ G+YA NF GGQVDIT+GKFVFS S+AY+I+ GKIT P
Sbjct: 361 RMTNTFMLEGQYSPEEIISSIDKGIYAPNFGGGQVDITSGKFVFSTSEAYLIEKGKITTP 420
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
+KGATLIG+GP +++K+SMIGN++ LD GVGVCGKDGQ VPVGVGQPTLK+D +TVGGT+
Sbjct: 421 IKGATLIGNGPEVMQKISMIGNNLSLDKGVGVCGKDGQSVPVGVGQPTLKVDELTVGGTS 480
>gi|416214971|ref|ZP_11623182.1| protein TldD [Neisseria meningitidis M01-240013]
gi|325143480|gb|EGC65801.1| protein TldD [Neisseria meningitidis M01-240013]
Length = 494
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 268/487 (55%), Positives = 357/487 (73%), Gaps = 4/487 (0%)
Query: 253 LISQKNIHPLNIA-RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEE 311
+ +HP A ++ LLE L ++L K L + + VDYAD Y Q T E+W LEE
Sbjct: 9 FLCADTMHPTYSAVQARLLEANRLSPELLAKSLCIIGAHHVDYADIYCQRTAYESWHLEE 68
Query: 312 GIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKN 371
GIVK+G+F INQGVGVRA+SGDKTAF Y+D + +++ + ++ R+I + GK+ K
Sbjct: 69 GIVKSGSFQINQGVGVRAVSGDKTAFAYADSLCIDSINRSARAVRAI-GAAGGKVSA-KM 126
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ + + S +D I+ ++ K+ LL +VE IA+ DPR+++V+A L+ EYD++ + R
Sbjct: 127 PSETRGKPVCSASDPIAGLDSAAKVALLNKVEAIAKAADPRIVQVMAGLTCEYDMVYLAR 186
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
DG ADIRP+V+L VT+I ++ RRE G++G GGRY+ YF + ++ + V +V AL
Sbjct: 187 LDGKHAADIRPMVRLNVTVIAKQGERREQGSAGGGGRYDLAYFDENLVRQFVDAAVKQAL 246
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
NLE++PAPAG M VVLG GWPG+LLHEA+GHGLEGDFNRK +S FS IG+R+A+K +T
Sbjct: 247 TNLESRPAPAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKETSVFSGRIGERVAAKGVT 306
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD G +A RRGS+NIDDEGN T+ T LIE+GIL GYMQD NARLM TGN RRES+
Sbjct: 307 VVDQGDIAGRRGSLNIDDEGNETRRTVLIEDGILVGYMQDETNARLMGTQSTGNGRRESY 366
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A P+PRMTNT+M NG + PEEII+S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++
Sbjct: 367 ASAPMPRMTNTFMENGGYEPEEIIASIDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEG 426
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS- 730
GK+ YPVKGAT+IG+GP +LK VSMIGND LD GVGVCGK+GQ VPVGVGQPTL+ID+
Sbjct: 427 GKLQYPVKGATIIGNGPEVLKHVSMIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAG 486
Query: 731 ITVGGTN 737
+TVGG+
Sbjct: 487 LTVGGSE 493
>gi|261400793|ref|ZP_05986918.1| TldD protein [Neisseria lactamica ATCC 23970]
gi|269209395|gb|EEZ75850.1| TldD protein [Neisseria lactamica ATCC 23970]
Length = 494
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 265/486 (54%), Positives = 355/486 (73%), Gaps = 4/486 (0%)
Query: 253 LISQKNIHPLNIA-RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEE 311
+ +HP A R LLE L ++L K L + + VDYAD Y Q T E+W LEE
Sbjct: 9 FLCADTMHPTYSAVRERLLEANRLSPELLAKSLCIIGAHHVDYADIYCQRTAYESWHLEE 68
Query: 312 GIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKN 371
GIVK+G+F I+QG+GVRA+SGDKTAF Y+D + +++ + ++ R+I + GK+ K
Sbjct: 69 GIVKSGSFQIDQGMGVRAVSGDKTAFAYADSLCIDSINRSARAVRAI-GAAGGKVSA-KM 126
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ + + S +D I+ ++ K+ LL +VE IA+ DPR+++V+A L+ EYD++ + R
Sbjct: 127 PSETRGKPVCSASDPIAGLDSAAKVALLNKVEAIAKAADPRIVQVMAGLTCEYDMVYLAR 186
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
DG ADIRP+V+L VT+I + RRE G++G GGRY+ YF + ++ + V +V AL
Sbjct: 187 LDGKHAADIRPMVRLNVTVIARQGERREQGSAGGGGRYDLAYFDETLVRQFVDAAVKQAL 246
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
NLE++PAPAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+R+A+K +T
Sbjct: 247 TNLESRPAPAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKGTSVFSGRIGERVAAKGVT 306
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD G +A RRGS+NIDDEGN T+ T LIE+GIL GYMQD NARL TGN RRES+
Sbjct: 307 VVDQGDIAGRRGSLNIDDEGNETRRTVLIEDGILAGYMQDETNARLTGTQPTGNGRRESY 366
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A +P+PRMTNT+M NG + P+EII+S+ G+YA NF GGQVDIT GKFVFSAS+A+ ++
Sbjct: 367 ASVPMPRMTNTFMENGGYEPDEIIASIDKGIYAVNFGGGQVDITGGKFVFSASEAWWVEG 426
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS- 730
G++ YPVKGAT+IG+GP +LK VSMIGND LD GVGVCGK+GQ VPVGVGQPTL+ID+
Sbjct: 427 GRLQYPVKGATIIGNGPEVLKHVSMIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAG 486
Query: 731 ITVGGT 736
+TVGG+
Sbjct: 487 LTVGGS 492
>gi|71728992|gb|EAO31123.1| Peptidase U62, modulator of DNA gyrase [Xylella fastidiosa Ann-1]
Length = 485
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 264/479 (55%), Positives = 345/479 (72%), Gaps = 3/479 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L++A S LL P LD+ + I G + VD+ D YFQ + E+W +E+GIVK G SI
Sbjct: 6 LSVAESRLLLPAGLDDGQIDSIFGTLLGPGVDFGDLYFQHARRESWSIEDGIVKDGTHSI 65
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNI--KKIKINS 379
QGVGVRAISG+KT F YSDDI+++ L+ A + R+I+ ++ + + +
Sbjct: 66 EQGVGVRAISGEKTGFAYSDDINRDALLEAAYAARAISRSPGDGVQGTHAVLRRHGRELC 125
Query: 380 LYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVAD 439
LY D + ++ EKI ++ RV+++ R DPRV +V+ NLSG DV+LI R+DG++ AD
Sbjct: 126 LYPALDPVGGMDNAEKIAVMRRVDQLLRAADPRVTQVMVNLSGGVDVVLIARSDGVLAAD 185
Query: 440 IRPLVQLFVTIIVEKNGRRE-IGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKP 498
+RPLV+L V +IVE + RRE G G F D E ++ AL+NLEA P
Sbjct: 186 VRPLVRLNVQVIVEGHDRRESGYAGGGGRYGYAELFADGRPEAFAREALRQALVNLEAIP 245
Query: 499 APAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL 558
APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK +S ++ IG+R+AS +TIVD+GTL
Sbjct: 246 APAGVMPVVLGAGWPGVLLHEAVGHGLEGDFNRKATSVYAGRIGERVASPGVTIVDDGTL 305
Query: 559 ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPR 618
RRGS+NIDDEG PTQCTTLIE+G+L GYMQD +NARLM ++ TGN RRESFAH+ +PR
Sbjct: 306 DGRRGSLNIDDEGTPTQCTTLIEDGVLVGYMQDTLNARLMGVASTGNGRRESFAHLTMPR 365
Query: 619 MTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPV 678
MTNTYM G EE+I SVK GLYA NF GGQVDIT+GK+VFSA++AY+I++G++T P+
Sbjct: 366 MTNTYMRAGAHSREEMIRSVKKGLYAVNFGGGQVDITSGKYVFSATEAYLIEDGRVTAPI 425
Query: 679 KGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
KGATLIG+GP +++V MIG+D+ LD GVGVCGKDGQ VPVGVGQP+L ID +TVGGT
Sbjct: 426 KGATLIGNGPETMQRVRMIGDDLALDAGVGVCGKDGQSVPVGVGQPSLLIDGLTVGGTQ 484
>gi|433537674|ref|ZP_20494165.1| modulator of DNA gyrase family protein [Neisseria meningitidis
77221]
gi|432270423|gb|ELL25561.1| modulator of DNA gyrase family protein [Neisseria meningitidis
77221]
Length = 494
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 267/480 (55%), Positives = 356/480 (74%), Gaps = 4/480 (0%)
Query: 259 IHPLNIA-RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTG 317
+HP A ++ LLE L ++L K L + + VDYAD Y Q T E+W LEEGIVK+G
Sbjct: 15 MHPTYSAVQARLLEANRLSPELLAKSLCIIGAHHVDYADIYCQRTAYESWHLEEGIVKSG 74
Query: 318 NFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKI 377
+F INQGVGVRA+SGDKTAF Y+D + +++ + ++ R+I + GK+ K + +
Sbjct: 75 SFQINQGVGVRAVSGDKTAFAYADSLCIDSINRSARAVRAI-GAAGGKVSA-KMPSETRG 132
Query: 378 NSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIV 437
+ S +D I+ ++ K+ LL +VE IA+ DPR+++V+A L+ EYD++ + R DG
Sbjct: 133 KPVCSASDPIAGLDSAAKVALLNKVEAIAKAADPRIVQVMAGLTCEYDMVYLARLDGKHA 192
Query: 438 ADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAK 497
ADIRP+V+L VT+I ++ RRE G++G GGRY+ YF + ++ + V +V AL NLE++
Sbjct: 193 ADIRPMVRLNVTVIAKQGERREQGSAGGGGRYDLAYFDENLVRQFVDAAVKQALTNLESR 252
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
PAPAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+R+A+K +T+VD G
Sbjct: 253 PAPAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKGTSVFSGRIGERVAAKGVTVVDQGD 312
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
+A RRGS+NIDDEGN T+ T LIE+GIL GYMQD NARL TGN RRES+A P+P
Sbjct: 313 IAGRRGSLNIDDEGNETRRTVLIEDGILVGYMQDETNARLTGTQSTGNGRRESYASAPMP 372
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNT+M NG + PEEII+S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++ G++ YP
Sbjct: 373 RMTNTFMENGSYEPEEIIASIDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEGGRLQYP 432
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS-ITVGGT 736
VKGAT+IG+GP +LK VSMIGND LD GVGVCGK+GQ VPVGVGQPTL+ID+ +TVGG+
Sbjct: 433 VKGATIIGNGPEVLKHVSMIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAGLTVGGS 492
>gi|359786614|ref|ZP_09289734.1| microcin-processing peptidase 2 [Halomonas sp. GFAJ-1]
gi|359296145|gb|EHK60399.1| microcin-processing peptidase 2 [Halomonas sp. GFAJ-1]
Length = 484
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 261/477 (54%), Positives = 350/477 (73%), Gaps = 3/477 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L+ A SILL P LD L LG +DYAD YFQ T E W+LE+G VK +++I
Sbjct: 8 LDTAVSILLTPSGLDLDALDTGLGYAMGAGIDYADLYFQRTWQEGWVLEDGEVKEASYNI 67
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+ GVGVR+++G+KT F YS+ I+ + L++ ++ I +GK + ++ + + Y
Sbjct: 68 DGGVGVRSLAGEKTGFAYSNQITADALVDTGRTAAGIVR--SGKQLSGQAVRPVSVAPFY 125
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ D ++ + +K+ LL+ +++AR DP + +V A+LSG Y+V+L+ +DG + ADIR
Sbjct: 126 AGIDPLAGLTAEDKVALLKEADRVARAADPCISQVSASLSGTYEVVLVRASDGTLAADIR 185
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDM-ILEKCVSNSVNSALINLEAKPAP 500
PLV+ V++I KNGRRE G++G GGRY+ D + + +V AL+NL+A AP
Sbjct: 186 PLVRFNVSVIAYKNGRRERGSAGGGGRYSMARLRDEGVAARYAKEAVRQALVNLDAVDAP 245
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG M VVLG GWPGILLHEA+GHGLEGDFNRKGSSAF+ +G+R+A+K +TIVD+ TL +
Sbjct: 246 AGQMPVVLGAGWPGILLHEAVGHGLEGDFNRKGSSAFAGRMGQRVAAKGVTIVDDATLLD 305
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RGS+++DDEG P Q T LIENGIL GYMQD +NARLMNM+ TGNARRESFAH+P+PRMT
Sbjct: 306 GRGSLSVDDEGTPGQNTPLIENGILTGYMQDKLNARLMNMAPTGNARRESFAHLPMPRMT 365
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NT ML G+ P +II SVK G+YA +F GGQVDIT+GKFVFSAS+AY+I++GKIT PVKG
Sbjct: 366 NTVMLAGQDEPSDIIKSVKRGIYAVSFGGGQVDITSGKFVFSASEAYLIEDGKITAPVKG 425
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
ATLIG+GP + +VSMIG+D ++D G+GVCGK+GQ VPVGVGQPTLK+D +TVGGT
Sbjct: 426 ATLIGNGPEAMGRVSMIGHDAEMDTGIGVCGKEGQGVPVGVGQPTLKLDELTVGGTQ 482
>gi|410611459|ref|ZP_11322557.1| TldD protein [Glaciecola psychrophila 170]
gi|410168877|dbj|GAC36446.1| TldD protein [Glaciecola psychrophila 170]
Length = 480
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 261/479 (54%), Positives = 356/479 (74%), Gaps = 7/479 (1%)
Query: 263 NIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSIN 322
N+ LL+ +L+ L L ++++ D+AD YFQ +++E W+LE+GI+K G+++I
Sbjct: 3 NLVEENLLDASNLNRSKLETALDTIYQHDNDFADLYFQSSQHETWVLEDGIIKEGSYNIE 62
Query: 323 QGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYS 382
+GVGVRA+SG+KT F YSD+IS L+ A K++RSI+N S GK KI ++K+ S Y
Sbjct: 63 RGVGVRAVSGEKTGFAYSDEISPEALMKAAKASRSISN-SGGKHKI-ASLKQSHPASRYH 120
Query: 383 FTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRP 442
+ + + +EKI LL + R ++ + +V+ ++SG Y+ ILI DG DIRP
Sbjct: 121 ADNPLLGMQEQEKIALLRAANEYIRKQESALSQVVISISGVYEEILIAATDGTFCTDIRP 180
Query: 443 LVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTD-----MILEKCVSNSVNSALINLEAK 497
L++ ++++EK+GRRE G+SG GGR+ Y+YF ++ +++ A +N++A
Sbjct: 181 LIRFNCSVLMEKDGRRERGSSGAGGRFAYDYFVADDDGRPRYQQVADEAIHMARVNIQAV 240
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
PAPAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+++ASK T+VD+GT
Sbjct: 241 PAPAGKMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGASTFSGRIGEQVASKGCTVVDDGT 300
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
LA+RRGS+++DDEG PTQ LIE+GILKGYMQD +NARLM ++ TGN RRES+AH+P+P
Sbjct: 301 LADRRGSLSVDDEGTPTQHNVLIEDGILKGYMQDKLNARLMGVAPTGNGRRESYAHLPMP 360
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNTYML G PEEII+S+ G+YA NF GGQVDIT+GKFVFS S+AY+I+ GKIT P
Sbjct: 361 RMTNTYMLGGNHSPEEIIASIDKGIYAPNFGGGQVDITSGKFVFSTSEAYLIEKGKITTP 420
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
+KGATLIG+GP ++K+SMIGND+ LD GVGVCGKDGQ +PVGVGQPTLK+D +TVGGT
Sbjct: 421 IKGATLIGNGPEAMQKISMIGNDLALDKGVGVCGKDGQSLPVGVGQPTLKVDELTVGGT 479
>gi|389606822|emb|CCA45733.1| Protein tldD homolog [Neisseria meningitidis alpha522]
Length = 494
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 266/486 (54%), Positives = 357/486 (73%), Gaps = 4/486 (0%)
Query: 253 LISQKNIHPLNIA-RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEE 311
+ +HP A ++ LLE L ++L K L + + VDYAD Y Q T E+W LEE
Sbjct: 9 FLCADTMHPTYSAVQARLLEANRLSPELLAKSLCIIGAHHVDYADIYCQRTAYESWHLEE 68
Query: 312 GIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKN 371
GIVK+G+F I+QGVGVRA+SGDKTAF Y+D + +++ + ++ R+I + GK+ K
Sbjct: 69 GIVKSGSFQIDQGVGVRAVSGDKTAFAYADSLCIDSINRSARAVRAI-GAAGGKVSA-KM 126
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ + + S +D I+ ++ K+ LL +VE IA+ DPR+++V+A L+ EYD++ + R
Sbjct: 127 PSETRGKPVCSASDPIAGLDSAAKVALLNKVEAIAKAADPRIVQVMAGLTCEYDMVYLAR 186
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
DG ADIRP+V+L VT+I ++ RRE G++G GGRY+ YF + ++ + V +V AL
Sbjct: 187 LDGKHAADIRPMVRLNVTVIAKQGERREQGSAGGGGRYDLAYFDENLVRQFVDAAVKQAL 246
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
NLE++PAPAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+R+A+K +T
Sbjct: 247 TNLESRPAPAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKGTSVFSGRIGERVAAKGVT 306
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD G +A RRGS+NIDDEGN T+ T LIE+GIL GYMQD NARL TGN RRES+
Sbjct: 307 VVDQGDIAGRRGSLNIDDEGNETRRTVLIEDGILVGYMQDETNARLTGTQSTGNGRRESY 366
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A P+PRMTNT+M NG + PEEII+S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++
Sbjct: 367 ASAPMPRMTNTFMENGSYEPEEIIASIDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEG 426
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS- 730
G++ YPVKGAT+IG+GP +LK VSMIGND LD GVGVCGK+GQ VPVGVGQPTL+ID+
Sbjct: 427 GRLQYPVKGATIIGNGPEVLKHVSMIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAG 486
Query: 731 ITVGGT 736
+TVGG+
Sbjct: 487 LTVGGS 492
>gi|344942145|ref|ZP_08781433.1| peptidase U62 modulator of DNA gyrase [Methylobacter tundripaludum
SV96]
gi|344263337|gb|EGW23608.1| peptidase U62 modulator of DNA gyrase [Methylobacter tundripaludum
SV96]
Length = 483
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 273/481 (56%), Positives = 347/481 (72%), Gaps = 7/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+AR +L P + + + KI+ + + VD AD YFQ + E+W++E GI+K G+ +I
Sbjct: 4 LNLARQAILIPAGIQDGDIEKIMNRLLSSPVDAADIYFQSSHFESWVMEGGIIKEGSHNI 63
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSN----GKIKIIKNIKKIKI 377
QG GVRA+ G+KT F YSD I L+ A + ++I Q K+ K
Sbjct: 64 EQGAGVRAVFGEKTGFAYSDRIELPVLLEAANNVKAIVRQGQDADPSHCKV--TTKAAAW 121
Query: 378 NSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIV 437
+ Y+ + + S+ ++KI LL RV+ R D R+ +VI +L G ++ IL+ R DG +V
Sbjct: 122 TNYYATQNPLKSLEDQQKIDLLRRVDSETRKLDSRIEEVIVSLVGVHEHILVARQDGSLV 181
Query: 438 ADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVS-NSVNSALINLEA 496
AD+RPLV++ V +IVE+NG+RE G+ G GGR +Y+YF D +V AL+NLEA
Sbjct: 182 ADVRPLVRMNVAVIVEQNGQREQGSMGGGGRSDYSYFIDGDTALAYGREAVRQALVNLEA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPGILLHEAIGHGLEGDFNRKG+SAFS +G+R+AS T+VD+G
Sbjct: 242 VEAPAGNMTVVLGSGWPGILLHEAIGHGLEGDFNRKGTSAFSGRVGERVASDLCTVVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL RRGS++IDDEG PT+ T LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P+
Sbjct: 302 TLPGRRGSLSIDDEGTPTELTVLIENGILKGYMQDQLNARLMGVNSTGNGRRESYAHLPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ PEEII SVK GLYA NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 362 PRMTNTYMLPGQHDPEEIIKSVKKGLYAKNFGGGQVDITSGKFVFSASEAYLIENGKITR 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
VKGATLIG+GP +L KVSM+G D+ LD GVG CGKDGQ VPVGVGQPTLKID +TVGGT
Sbjct: 422 AVKGATLIGNGPEVLTKVSMVGTDLALDSGVGSCGKDGQSVPVGVGQPTLKIDGLTVGGT 481
Query: 737 N 737
+
Sbjct: 482 S 482
>gi|304388693|ref|ZP_07370753.1| U62 family peptidase 2 TldD [Neisseria meningitidis ATCC 13091]
gi|304337360|gb|EFM03534.1| U62 family peptidase 2 TldD [Neisseria meningitidis ATCC 13091]
Length = 494
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 266/486 (54%), Positives = 356/486 (73%), Gaps = 4/486 (0%)
Query: 253 LISQKNIHPLNIA-RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEE 311
+ +HP A R LLE L ++L K L + + VDYAD Y Q T E+W LEE
Sbjct: 9 FLCADTMHPTYSAVRERLLEANRLSPELLAKSLCIIGAHHVDYADIYCQRTAYESWHLEE 68
Query: 312 GIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKN 371
GIVK+G+F I+QGVGVRA+SGDKTAF Y+D + +++ + ++ R+I + GK+ K
Sbjct: 69 GIVKSGSFQIDQGVGVRAVSGDKTAFAYADSLCIDSINRSARAVRAI-GAAGGKVSA-KM 126
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ + + S +D I+ ++ K+ LL +VE IA+ DPR+++V+A L+ EYD++ + R
Sbjct: 127 PSETRGKPVCSASDPIAGLDSAAKVALLNKVEAIAKAADPRIVQVMAGLTCEYDMVYLAR 186
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
DG ADIRP+V+L VT+I ++ RRE G++G GGR + YF + ++ + V ++V AL
Sbjct: 187 LDGKHAADIRPMVRLNVTVIAKQGERREQGSAGGGGRCDLAYFDETLVRQFVDSAVKQAL 246
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
NLE++PAPAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+R+A+K +T
Sbjct: 247 TNLESRPAPAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKGTSVFSGRIGERVAAKGVT 306
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD G +A RRGS+NIDDEGN T+ T LIE+GIL GYMQD NARL TGN RRES+
Sbjct: 307 VVDQGDIAGRRGSLNIDDEGNETRRTVLIEDGILVGYMQDETNARLTGTQSTGNGRRESY 366
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A P+PRMTNT+M NG + PEEII+S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++
Sbjct: 367 ASAPMPRMTNTFMENGSYEPEEIIASIDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEG 426
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS- 730
G++ YPVKGAT+IG+GP +LK VSMIGND LD GVGVCGK+GQ VPVGVGQPTL+ID+
Sbjct: 427 GRLQYPVKGATIIGNGPEVLKHVSMIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAG 486
Query: 731 ITVGGT 736
+TVGG+
Sbjct: 487 LTVGGS 492
>gi|104780297|ref|YP_606795.1| peptidase U62 TldD [Pseudomonas entomophila L48]
gi|95109284|emb|CAK13981.1| peptidase U62 TldD [Pseudomonas entomophila L48]
Length = 479
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 269/470 (57%), Positives = 353/470 (75%), Gaps = 4/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L L +LG + +D AD YFQ +E W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGLTLDSLQTVLGELAGPGIDAADLYFQGQISETWALEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
A SG+KT F YS+ I+ L +A ++ RSI+ NGK++ ++ + +LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAINLEALTSAARAARSISRAGQNGKVQAFRSQD---VTALYAADNPL 128
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
+ ++ EK++LL+RV+ R DPR+ +V +++G ++ IL+ DG + AD+RPLV+
Sbjct: 129 AVLSRAEKVELLKRVDAATRALDPRIQQVSVSMAGVWERILVAAADGSLAADVRPLVRFN 188
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
V++IVE+NGRRE G G GGR +Y YF+D + ++ AL+NLEA PAPAG + VV
Sbjct: 189 VSVIVEQNGRRERGGQGGGGRTDYRYFSDERVMGYAREALRQALVNLEAIPAPAGTLPVV 248
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LGPGW G+LLHEA+GHGLEGDFNRKGSSAFS IG+++ASK TIVD+GTL RRGS+++
Sbjct: 249 LGPGWSGVLLHEAVGHGLEGDFNRKGSSAFSGRIGEQVASKLCTIVDDGTLEGRRGSLSV 308
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PT+CTTLIENG+LKGYMQD +NARLM M++TGN RRES+AH+P+PRMTNTYM G
Sbjct: 309 DDEGTPTECTTLIENGVLKGYMQDKLNARLMGMAVTGNGRRESYAHLPMPRMTNTYMRAG 368
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ PEEII SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+G
Sbjct: 369 ESDPEEIIRSVKKGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGNG 428
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
P ++ VSM+GND+ LD GVG CGKDGQ VPVGVGQPTLK+D+ITVGGT
Sbjct: 429 PEAMRGVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKLDAITVGGTG 478
>gi|392549050|ref|ZP_10296187.1| suppressor of CsrA inhibitory activity; peptidase; involved in the
control of DNA gyrase [Pseudoalteromonas rubra ATCC
29570]
Length = 484
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 259/473 (54%), Positives = 352/473 (74%), Gaps = 7/473 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL DL + L + L + ++KVDYAD YFQ + +E W+LE+G VK G+++I +GVGVR
Sbjct: 13 LLTDSDLTREQLQQTLAYIHQHKVDYADLYFQSSYHETWVLEDGSVKEGSYNIERGVGVR 72
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+SG+KT F YSD I+ L A + RSIA Q G+ K ++ +K + + + +
Sbjct: 73 AVSGEKTGFSYSDAINMEALNQAAMAARSIAQQ--GENKQVQVFSDVKAATQFEASQPLL 130
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
S++ +K+ LL VE R P +V++++S Y+ +LI +DG DIRPLV+L
Sbjct: 131 SMSDTDKVSLLREVEAAIRELAPEAEQVVSSMSAVYEEVLIAASDGTFATDIRPLVRLNC 190
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLEAKPAPAGI 503
++++ KNGRRE G++G G R +YNYF +++ + V+ +V+ A +NLEA APAG
Sbjct: 191 SVLLAKNGRRERGSAGGGARLDYNYFRELVDGKPRWQHYVTKAVHQARVNLEAVDAPAGA 250
Query: 504 MKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRG 563
M VVLG GWPG+LLHEA+GHGLEGDFNRKG+SAFS +G+++AS T+VD+GT+ NRRG
Sbjct: 251 MPVVLGAGWPGVLLHEAVGHGLEGDFNRKGASAFSGRVGEQVASSLCTVVDDGTMDNRRG 310
Query: 564 SINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTY 623
S+NIDDEG P LIE G+LKGYMQD +NARLM ++ TGNARRES+AH+P+PRMTNTY
Sbjct: 311 SLNIDDEGTPAGYNVLIEKGVLKGYMQDKLNARLMGVAPTGNARRESYAHLPMPRMTNTY 370
Query: 624 MLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATL 683
ML G+ EII+SVK G++A NF GGQVDIT+GKFVFSAS+AY+I++GK+T P+KGATL
Sbjct: 371 MLPGEHSQSEIIASVKKGIFAPNFGGGQVDITSGKFVFSASEAYLIEDGKVTQPIKGATL 430
Query: 684 IGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
IG+GP++++KVSM+GND++LD GVGVCGK+GQ VPVGVGQP+LKID +TVGGT
Sbjct: 431 IGNGPDVMQKVSMVGNDLELDTGVGVCGKNGQSVPVGVGQPSLKIDELTVGGT 483
>gi|406595212|ref|YP_006746342.1| peptidase [Alteromonas macleodii ATCC 27126]
gi|406372533|gb|AFS35788.1| putative peptidase [Alteromonas macleodii ATCC 27126]
Length = 480
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 257/473 (54%), Positives = 354/473 (74%), Gaps = 7/473 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL LD L + L + ++ DYAD YFQ +++E+W+LE+GI+K G+++I +GVGVR
Sbjct: 9 LLSDSGLDISKLERALATIHRHDTDYADLYFQSSQHESWVLEDGIIKEGSYNIERGVGVR 68
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
AISG+KT F YSD+IS+ L A K+ R IA +G + + ++ + + + YS + I
Sbjct: 69 AISGEKTGFAYSDEISEEALTKACKAARGIA--PSGGSQQVASLGQKPVQARYSENNPIL 126
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ EKI LL+ V+ R ++P +V+ +LSG Y+ IL+ +DG + DIRPLV+L
Sbjct: 127 AMQDAEKISLLKAVDAYIRKQEPSANQVVVSLSGVYEEILVAGSDGTLATDIRPLVRLNC 186
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTD-----MILEKCVSNSVNSALINLEAKPAPAGI 503
++++E+ RRE G++G GGRY Y++F E ++++ A +N++A +PAG
Sbjct: 187 SVLLEQGDRRERGSAGAGGRYAYSFFKQDENGKPYYETLAEDALHMARVNMQAVASPAGA 246
Query: 504 MKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRG 563
M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+R+A+K +T+VD+GTL +RRG
Sbjct: 247 MPVVLGNGWPGVLLHEAVGHGLEGDFNRKGASTFSGRIGQRVAAKGVTVVDDGTLNDRRG 306
Query: 564 SINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTY 623
S+++DDEG PT LIE+GILKGYMQD NA+LM ++ TGN RRES+AH+P+PRMTNTY
Sbjct: 307 SLSVDDEGTPTAHNVLIEDGILKGYMQDKHNAKLMGVTPTGNGRRESYAHLPMPRMTNTY 366
Query: 624 MLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATL 683
ML G+ P+EII+S+ G+YA NF+GGQVDIT+GKFVFS+++AY+I+NGKIT PVKGATL
Sbjct: 367 MLEGQHDPQEIIASIDKGIYAPNFAGGQVDITSGKFVFSSAEAYLIENGKITAPVKGATL 426
Query: 684 IGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
IG+GP +++K+SMIGND LD GVGVCGKDGQ VPVGVGQPTLKID +TVGGT
Sbjct: 427 IGNGPEVMQKISMIGNDTALDKGVGVCGKDGQSVPVGVGQPTLKIDELTVGGT 479
>gi|421492764|ref|ZP_15940123.1| TLDD [Morganella morganii subsp. morganii KT]
gi|455740521|ref|YP_007506787.1| TldD protein [Morganella morganii subsp. morganii KT]
gi|400192869|gb|EJO26006.1| TLDD [Morganella morganii subsp. morganii KT]
gi|455422084|gb|AGG32414.1| TldD protein [Morganella morganii subsp. morganii KT]
Length = 481
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 269/474 (56%), Positives = 355/474 (74%), Gaps = 9/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL DLDE+ L +L + +DY D YFQ + +E W+LE+ I+K G+++I+QGVG+R
Sbjct: 10 LLTAHDLDEQDLFSVLTQLADRHIDYGDLYFQSSFHEAWVLEDKIIKNGSYNIDQGVGIR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSLYSFTDTI 387
A+SG+KT F Y+D IS L + + RSI Q NGK++ ++ ++ +LY+ D +
Sbjct: 70 AVSGEKTGFAYADQISLTALQQSASAARSIVREQGNGKVQ---SLHRVNNTALYAALDPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
++ EKI LL R++++AR +DPRV +V A+L+G Y+ +L+ DG + DIRPLV+L
Sbjct: 127 RAMPREEKIALLHRLDRVARAEDPRVQEVNASLTGVYEEVLVAATDGTLATDIRPLVRLS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEAKPAPAG 502
V+++VE++G+RE G SG GGR+ Y YF ++ + +V AL+NL A APAG
Sbjct: 187 VSVLVEEDGKREHGGSGGGGRFGYEYFLGTEDGEIRADHFAREAVRMALVNLSAVAAPAG 246
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
+M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG+++ S TIVD+GT+ +RR
Sbjct: 247 LMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGASVFSGKIGQQVTSSLCTIVDDGTIGDRR 306
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+ IDDEG P Q LIENGILKGYMQD +NARLM + TGN RRES+AH+P+PRMTNT
Sbjct: 307 GSLAIDDEGVPGQYNILIENGILKGYMQDKLNARLMGVDPTGNGRRESYAHLPMPRMTNT 366
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML G+ PEEII+SVKNGLYA NF GGQVDIT+GKFVFS S+AY+I++GKIT PVKGAT
Sbjct: 367 YMLAGETSPEEIIASVKNGLYAPNFGGGQVDITSGKFVFSTSEAYLIEDGKITRPVKGAT 426
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
LIG G +++VSM+GND+KLD GVGVCGK+GQ VPVGVGQPTLK+DSITVGGT
Sbjct: 427 LIGSGIEAMQQVSMVGNDLKLDKGVGVCGKEGQSVPVGVGQPTLKLDSITVGGT 480
>gi|307544506|ref|YP_003896985.1| protease TldD [Halomonas elongata DSM 2581]
gi|307216530|emb|CBV41800.1| K03568 TldD protein [Halomonas elongata DSM 2581]
Length = 496
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 263/488 (53%), Positives = 354/488 (72%), Gaps = 4/488 (0%)
Query: 251 CILISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILE 310
C + SQ + L+ A ILL P LD L LG +DYAD YFQ + +E W LE
Sbjct: 11 CRMTSQTSSM-LDQAGEILLAPGGLDLDTLDAGLGQAMGPGIDYADLYFQRSWHEGWSLE 69
Query: 311 EGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIK 370
+G VK +++I+ GVGVRA++G+KT F YS+ I+ + L ++ I +S ++
Sbjct: 70 DGEVKEASYNIDGGVGVRAMAGEKTGFAYSNQITADALAETGRTASGIV-RSGKRLATAP 128
Query: 371 NIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILIT 430
I+ + + Y+ D ++ ++ +KI +L+ +++AR DP V +V A+L+G ++V+L+
Sbjct: 129 RIQ-VDAEARYAGVDPLTGLSAEDKIAMLKLADRVARAADPAVEQVSASLTGVHEVVLVR 187
Query: 431 RNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNS 489
+DG DIRPLV+ V++IV +NGRRE G++G GGRY + D + E+ +V
Sbjct: 188 ASDGTQAVDIRPLVRFNVSVIVVRNGRRERGSAGGGGRYPMSRLRDDNVAERFAKEAVRQ 247
Query: 490 ALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKE 549
AL+NLEA APAG M VVLG GWPGILLHEA+GHGLEGDFNRKGSSAF+ +G+R+A+
Sbjct: 248 ALVNLEAVDAPAGQMPVVLGAGWPGILLHEAVGHGLEGDFNRKGSSAFAGRLGERVAAPG 307
Query: 550 ITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRE 609
+T+VD+ TLA+RRGS+++DDEG P QCTTLIE+GIL GYMQD +NARLM M+ TGNARRE
Sbjct: 308 VTVVDDATLADRRGSMSVDDEGTPGQCTTLIEDGILTGYMQDKLNARLMGMAPTGNARRE 367
Query: 610 SFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYII 669
SFAH+P+PRMTNTYM G+ P +II SV G+YA +F GGQVDIT+GKFVFSAS+AY+I
Sbjct: 368 SFAHLPMPRMTNTYMQAGQDDPADIIGSVDRGIYAVSFGGGQVDITSGKFVFSASEAYLI 427
Query: 670 KNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKID 729
+ G+IT PVKGATLIG+GP + +VSMIG+DM+LD G+GVCGK+GQ VPVGVGQPTLK+D
Sbjct: 428 EGGRITAPVKGATLIGNGPEAMGRVSMIGHDMELDTGIGVCGKEGQGVPVGVGQPTLKLD 487
Query: 730 SITVGGTN 737
+TVGGT
Sbjct: 488 ELTVGGTQ 495
>gi|410087156|ref|ZP_11283861.1| TldD protein [Morganella morganii SC01]
gi|409766385|gb|EKN50479.1| TldD protein [Morganella morganii SC01]
Length = 481
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 270/474 (56%), Positives = 354/474 (74%), Gaps = 9/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL DLDE+ L +L + +DY D YFQ + +E W+LE+ I+K G+++I+QGVG+R
Sbjct: 10 LLTAHDLDEQDLFSVLTQLADRHIDYGDLYFQSSFHEAWVLEDKIIKNGSYNIDQGVGIR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSLYSFTDTI 387
A+SG+KT F Y+D IS L + + RSI Q NGK++ ++ ++ +LY+ D +
Sbjct: 70 AVSGEKTGFAYADQISLTALQQSASAARSIVREQGNGKVQ---SLHRVNNTALYAALDPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
++ EKI LL R++++AR +DPRV +V A+L+G Y+ +L+ DG + DIRPLV+L
Sbjct: 127 RAMPREEKIALLHRLDRVARAEDPRVQEVNASLTGVYEEVLVAATDGTLATDIRPLVRLS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEAKPAPAG 502
V+++VE++G+RE G SG GGR+ Y YF ++ + +V AL+NL A APAG
Sbjct: 187 VSVLVEEDGKREHGGSGGGGRFGYEYFLGTEDGEIRADHFAREAVRMALVNLSAVAAPAG 246
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG+++ S TIVD+GT+ +RR
Sbjct: 247 SMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGASVFSGKIGQQVTSSLCTIVDDGTIGDRR 306
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+ IDDEG P Q LIENGILKGYMQD +NARLM + TGN RRES+AH+P+PRMTNT
Sbjct: 307 GSLAIDDEGVPGQYNVLIENGILKGYMQDKLNARLMGVDPTGNGRRESYAHLPMPRMTNT 366
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML G+ PEEII+SVKNGLYA NF GGQVDIT+GKFVFS S+AY+I+NGKIT PVKGAT
Sbjct: 367 YMLAGETSPEEIIASVKNGLYAPNFGGGQVDITSGKFVFSTSEAYLIENGKITRPVKGAT 426
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
LIG G +++VSM+GND+KLD GVGVCGK+GQ VPVGVGQPTLK+DSITVGGT
Sbjct: 427 LIGSGIEAMQQVSMVGNDLKLDKGVGVCGKEGQSVPVGVGQPTLKLDSITVGGT 480
>gi|407682135|ref|YP_006797309.1| peptidase [Alteromonas macleodii str. 'English Channel 673']
gi|407243746|gb|AFT72932.1| putative peptidase [Alteromonas macleodii str. 'English Channel
673']
Length = 480
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 257/473 (54%), Positives = 354/473 (74%), Gaps = 7/473 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL LD L + L + ++ DYAD YFQ +++E+W+LE+GI+K G+++I +GVGVR
Sbjct: 9 LLSDSGLDISKLERALATIHRHDTDYADLYFQSSQHESWVLEDGIIKEGSYNIERGVGVR 68
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
AISG+KT F YSD+IS+ L A K+ R IA +G + + ++ + + + YS + I
Sbjct: 69 AISGEKTGFAYSDEISEEALTKACKAARGIA--PSGGSQQVASLGQKPVQARYSENNPIL 126
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ EKI LL+ V+ R ++P +V+ +LSG Y+ IL+ +DG + DIRPLV+L
Sbjct: 127 AMQDVEKISLLKAVDAYIRKQEPSANQVVVSLSGVYEEILVAGSDGTLATDIRPLVRLNC 186
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTD-----MILEKCVSNSVNSALINLEAKPAPAGI 503
++++E+ RRE G++G GGRY Y++F E ++++ A +N++A +PAG
Sbjct: 187 SVLLEQGDRRERGSAGAGGRYAYSFFKQDENGKPYYETLAEDALHMARVNMQAVASPAGA 246
Query: 504 MKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRG 563
M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+R+A+K +T+VD+GTL +RRG
Sbjct: 247 MPVVLGNGWPGVLLHEAVGHGLEGDFNRKGASTFSGRIGQRVAAKGVTVVDDGTLNDRRG 306
Query: 564 SINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTY 623
S+++DDEG PT LIE+GILKGYMQD NA+LM ++ TGN RRES+AH+P+PRMTNTY
Sbjct: 307 SLSVDDEGTPTAHNVLIEDGILKGYMQDKHNAKLMGVAPTGNGRRESYAHLPMPRMTNTY 366
Query: 624 MLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATL 683
ML G+ P+EII+S+ G+YA NF+GGQVDIT+GKFVFS+++AY+I+NGKIT PVKGATL
Sbjct: 367 MLEGQHDPQEIIASIDKGIYAPNFAGGQVDITSGKFVFSSAEAYLIENGKITAPVKGATL 426
Query: 684 IGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
IG+GP +++K+SMIGND LD GVGVCGKDGQ VPVGVGQPTLKID +TVGGT
Sbjct: 427 IGNGPEVMQKISMIGNDTALDKGVGVCGKDGQSVPVGVGQPTLKIDELTVGGT 479
>gi|357406799|ref|YP_004918723.1| protein tldD-like protein [Methylomicrobium alcaliphilum 20Z]
gi|351719464|emb|CCE25140.1| Protein tldD homolog [Methylomicrobium alcaliphilum 20Z]
Length = 482
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 268/479 (55%), Positives = 352/479 (73%), Gaps = 7/479 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LNIA+ +L P L EK + +++ ++ VD AD YFQ + E+W++E GI+K G+ +I
Sbjct: 7 LNIAKQTILAPAGLQEKDIERVMSSLLSVPVDAADIYFQSSHYESWVMESGIIKEGSHNI 66
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSL 380
QG GVRA+ G+KT F YSD I L+ A + ++I Q N + I K +
Sbjct: 67 EQGAGVRAVVGEKTGFAYSDKIELPVLLEAAGNVKAIVRQGQNARTAIAKQAAWPR---Y 123
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y + + S+ ++K++LL +V++ R D R+ +V+ +L G ++ +L+ DG + ADI
Sbjct: 124 YHPVNPLKSLADQQKVELLHKVDRETRKLDSRIEEVVISLVGLHENVLVANQDGTLAADI 183
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFT--DMILEKCVSNSVNSALINLEAKP 498
RPLV++ V++IVE+NGRRE G+ G GGR +Y F D LE +V AL+NL+A
Sbjct: 184 RPLVRMNVSVIVEENGRREQGSMGGGGRCDYGMFVNQDKALEYG-REAVRQALVNLDAVD 242
Query: 499 APAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL 558
APAG M VVLG GWPGILLHEAIGHGLEGDFNRKG+SAFS +G+R+AS T+VD+GTL
Sbjct: 243 APAGSMTVVLGAGWPGILLHEAIGHGLEGDFNRKGTSAFSGRVGERVASDLCTVVDDGTL 302
Query: 559 ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPR 618
RRGS++IDDEG PT+ T LIENGILKGYMQD +NARLM +S TGN RRES+AH+P+PR
Sbjct: 303 EGRRGSLSIDDEGTPTEKTVLIENGILKGYMQDRLNARLMGVSPTGNGRRESYAHLPMPR 362
Query: 619 MTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPV 678
MTNTYML G PEEII SVK GLYA NF GGQVDIT+GKFVFSAS+AY+I++G++T PV
Sbjct: 363 MTNTYMLPGPHDPEEIIRSVKKGLYAKNFGGGQVDITSGKFVFSASEAYLIEDGQLTRPV 422
Query: 679 KGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
KGATLIG+GP++L +VSM+G D++LD GVG CGKDGQ VPVGVGQPTLK+D++TVGGT+
Sbjct: 423 KGATLIGNGPDVLTRVSMVGTDLELDSGVGTCGKDGQSVPVGVGQPTLKVDALTVGGTS 481
>gi|350569953|ref|ZP_08938330.1| U62 family peptidase 2 TldD [Neisseria wadsworthii 9715]
gi|349797528|gb|EGZ51286.1| U62 family peptidase 2 TldD [Neisseria wadsworthii 9715]
Length = 487
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 259/470 (55%), Positives = 355/470 (75%), Gaps = 3/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL L + L K LG + NKVDYAD Y Q E+W LEEG+VK+G+F I+QG+GVR
Sbjct: 17 LLAANQLSPESLAKSLGIIGANKVDYADIYCQRMAFESWHLEEGMVKSGSFQIDQGIGVR 76
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSLYSFTDTI 387
A+SG+KTAF Y+D+++ ++ + ++ R+I G++ + + + +++ + +
Sbjct: 77 AVSGEKTAFAYADNLNMESIARSAEAVRAIGLAGGEGRVHVPLPLP-VSGKAVHQTVNPM 135
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S++ K++LL +VE +A+ DPR+++V+A L+ E+D+I I R DG ADIRPLV+L
Sbjct: 136 HSLDSAAKVELLNKVEALAKAADPRIVQVMAGLTCEHDLIYIARLDGKHAADIRPLVRLS 195
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
VT+I ++ RRE+G+ G GGR++ YF+D +L+ V +V ALINLEA+PAPAG MKVV
Sbjct: 196 VTVIAKQGDRREMGSCGGGGRFDLTYFSDEVLKSYVDTAVKQALINLEARPAPAGAMKVV 255
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LG GWPG+LLHEA+GHGLEGDFNRK +SAFS IG+R+A+K +T++D G +A+RRGS+NI
Sbjct: 256 LGSGWPGVLLHEAVGHGLEGDFNRKETSAFSGRIGERVAAKGVTVIDQGDIADRRGSLNI 315
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEGN T+ LIE+GIL GY+QD NARLM + +TGN RRES++ P+PRMTNT+M +G
Sbjct: 316 DDEGNETKRNVLIEDGILVGYLQDETNARLMGVPVTGNGRRESYSAAPMPRMTNTFMESG 375
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
PEEII+S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++ GK+ YPVKGAT++G+G
Sbjct: 376 GHDPEEIIASIDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEKGKLQYPVKGATIVGNG 435
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKID-SITVGGT 736
P +LK VSMIGNDM LD G+GVCGKDGQ VPVGVGQPTL+ID +TVGG+
Sbjct: 436 PEVLKHVSMIGNDMALDKGIGVCGKDGQSVPVGVGQPTLRIDEGLTVGGS 485
>gi|298370187|ref|ZP_06981503.1| acid phosphatase SurE [Neisseria sp. oral taxon 014 str. F0314]
gi|298281647|gb|EFI23136.1| acid phosphatase SurE [Neisseria sp. oral taxon 014 str. F0314]
Length = 480
Score = 546 bits (1408), Expect = e-152, Method: Compositional matrix adjust.
Identities = 264/476 (55%), Positives = 353/476 (74%), Gaps = 9/476 (1%)
Query: 266 RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGV 325
R LLE L ++L + L + KVDYAD Y Q T E+W LEEGIVK+G+F I QGV
Sbjct: 9 RHDLLEANHLSPELLARSLSIIGGRKVDYADIYCQHTAFESWHLEEGIVKSGSFQIEQGV 68
Query: 326 GVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA---NQSNGKIKIIKNIKKIKINSLYS 382
GVRA+SG+KTAF Y+D + +++ + + R I + + ++ +K+ K++ +S
Sbjct: 69 GVRAVSGEKTAFAYADSLCIDSINRSAHAVRVIGAGGGEQHIRVPAVKHGKQV-----HS 123
Query: 383 FTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRP 442
D I+S++ K+ LL +VE +A+ DPR+++V+A L+ EYD+I I R DG AD+RP
Sbjct: 124 GFDPIASLDSAAKVALLNKVETLAKAADPRIVQVMAGLTCEYDMIYIARLDGRHAADVRP 183
Query: 443 LVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAG 502
+V+L VT+I ++ RRE G++G GGRY+ YF + ++ + V ++V ALINLE++PAPAG
Sbjct: 184 MVRLNVTVIAKQGDRREQGSAGGGGRYDLAYFDETLVRQFVDSAVKQALINLESRPAPAG 243
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
M VVLG GWPG+LLHEA+GHGLEGDFNRK +S FS IG+R+A+K +T+VD G +A+RR
Sbjct: 244 EMTVVLGNGWPGVLLHEAVGHGLEGDFNRKETSVFSGRIGERVAAKGVTVVDQGDIADRR 303
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+NIDDEGN T+ T LIE+GIL GYMQD NARLM TGN RRES+A P+PRMTNT
Sbjct: 304 GSLNIDDEGNETRRTVLIEDGILVGYMQDETNARLMGTQSTGNGRRESYASAPMPRMTNT 363
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
+M NG + P+EII+S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++ GK+ YPVKGAT
Sbjct: 364 FMENGGYEPDEIIASIDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEGGKLQYPVKGAT 423
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKID-SITVGGTN 737
+IG+GP +LK VSMIGND LD G+GVCGKDGQ VPVGVGQPTL+ID +TVGG+
Sbjct: 424 IIGNGPEVLKHVSMIGNDTALDSGIGVCGKDGQSVPVGVGQPTLRIDVGLTVGGSE 479
>gi|269469167|gb|EEZ80709.1| Zn-dependent protease [uncultured SUP05 cluster bacterium]
Length = 474
Score = 546 bits (1408), Expect = e-152, Method: Compositional matrix adjust.
Identities = 269/471 (57%), Positives = 352/471 (74%), Gaps = 6/471 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL+ L+++ + +L ++ V+YAD YFQ + E+W LEEGIVK+G + I GVG R
Sbjct: 5 LLDDHHLNQEKITSLLSSLAVKDVNYADLYFQHSVAESWFLEEGIVKSGTYHIGHGVGAR 64
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSLYSFTDTI 387
A+ G++T F YSDD++ + AV+ +R I+ +Q I+ ++ ++ + YS +
Sbjct: 65 AVKGEQTGFSYSDDLNIKAIERAVEFSRGISKHQEPQSIQAFHSVPQV---AKYSGLSPL 121
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S+ EK+ LL++++ IAR K+P+V +V A+LSG Y +LI DG+ D RP+V++
Sbjct: 122 GSLTSEEKVDLLKQIDSIAR-KEPKVKQVSASLSGAYTEVLIVSTDGVYQKDYRPMVRVS 180
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSN-SVNSALINLEAKPAPAGIMKV 506
V++IVE GR E +SG GGRY+Y YF D L + ++ ++ AL+ LE+K APAG M V
Sbjct: 181 VSVIVEHEGRIEHASSGGGGRYDYRYFIDHNLAEIYTHEAIRQALVALESKGAPAGNMPV 240
Query: 507 VLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSIN 566
+LGPGWPG+LLHEAIGHGLEGDFNRK SS F+ IG++IAS + TIVDNGTLANRRGS+
Sbjct: 241 ILGPGWPGVLLHEAIGHGLEGDFNRKESSVFTGKIGEQIASSKCTIVDNGTLANRRGSLT 300
Query: 567 IDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLN 626
IDDEG PTQ TTLIENGILKGY+ D +NARLM TGN RRES+AHIP+PRMTNTYMLN
Sbjct: 301 IDDEGTPTQNTTLIENGILKGYLFDKLNARLMGQKSTGNGRRESYAHIPMPRMTNTYMLN 360
Query: 627 GKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGH 686
GK EE+I+SV +GLYA NF GGQVDIT+GKFVFSA++AY+IKNGKIT PVKGATLIG
Sbjct: 361 GKDKLEEMIASVDDGLYAVNFDGGQVDITSGKFVFSANEAYLIKNGKITAPVKGATLIGS 420
Query: 687 GPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
G +LKK+SM+ ND++LD G+GVCGK+GQ VPVGVGQP+LKID +TVGGT
Sbjct: 421 GDEVLKKISMVANDLRLDSGIGVCGKEGQSVPVGVGQPSLKIDQLTVGGTE 471
>gi|410623419|ref|ZP_11334233.1| TldD protein [Glaciecola pallidula DSM 14239 = ACAM 615]
gi|410157021|dbj|GAC29607.1| TldD protein [Glaciecola pallidula DSM 14239 = ACAM 615]
Length = 481
Score = 546 bits (1408), Expect = e-152, Method: Compositional matrix adjust.
Identities = 253/474 (53%), Positives = 351/474 (74%), Gaps = 8/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL +D+ L +L ++F ++ ++AD YFQ +++E+W+LE+GIVK G+++I +GVGVR
Sbjct: 9 LLTASGIDKNRLSSLLEDVFSHQTNFADLYFQSSQHESWVLEDGIVKDGSYNIERGVGVR 68
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
ISG+KT F YSD+IS L +A K+ R IA G I + + +LY+ + I
Sbjct: 69 VISGEKTGFAYSDEISSRALADACKAARGIA--PAGGIHKVDGFSAVGHKALYTEKNPIL 126
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
S+ KI LL+ V++ R P +V+ +LSG Y+ +L+ DG DIRPL++L
Sbjct: 127 SMQDSAKITLLQTVDRYIRKTAPHATQVVVSLSGVYEEVLVAATDGTFATDIRPLIRLNC 186
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMI------LEKCVSNSVNSALINLEAKPAPAG 502
++++EK G+RE G++G GGR Y+YF ++ E+ +++ A +NL A PAPAG
Sbjct: 187 SVLLEKEGKRERGSAGAGGRRTYDYFESIVKDNKPLYEQLADEAIHMAEVNLAAVPAPAG 246
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+++A+K +T+VD+GT+ +RR
Sbjct: 247 QMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGASTFSGRIGQQVAAKGVTVVDDGTMVDRR 306
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+++DDEG PTQ LIE+G+LKGYMQD NA LM +S TGN RRES+AH+P+PRMTNT
Sbjct: 307 GSLSVDDEGVPTQRNVLIEDGVLKGYMQDKHNASLMGLSPTGNGRRESYAHLPMPRMTNT 366
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML G+ PE+II+SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T P+KGAT
Sbjct: 367 YMLAGQHSPEDIIASVERGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTTPIKGAT 426
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
LIG+GP +++++SMIGND+ LD G+GVCGKDGQ +PVGVGQPTLK+D +TVGGT
Sbjct: 427 LIGNGPEVMQQISMIGNDLSLDMGIGVCGKDGQSLPVGVGQPTLKVDKLTVGGT 480
>gi|160871579|ref|ZP_02061711.1| peptidase U62, modulator of DNA gyrase [Rickettsiella grylli]
gi|159120378|gb|EDP45716.1| peptidase U62, modulator of DNA gyrase [Rickettsiella grylli]
Length = 483
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 282/475 (59%), Positives = 350/475 (73%), Gaps = 4/475 (0%)
Query: 264 IARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQ 323
+AR LL+P L E L KIL + ++D AD YFQ ++ E+WILE+ I+K GNF+I +
Sbjct: 8 LAREALLDPAGLTENQLQKILARLLAPQIDMADLYFQVSQLESWILEDSIIKNGNFAIER 67
Query: 324 GVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSLYS 382
GVGVRAISGDKT F YSDDI L +A K +IA+ G ++ + K ++ LY
Sbjct: 68 GVGVRAISGDKTGFAYSDDILLPALESAAKMAGNIASMGQQGHVRAWE--KNTRLKPLYE 125
Query: 383 FTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRP 442
+ ISS +EKI LL +V+ +AR D R+ +V A+L G +VIL+ N+G + ADIRP
Sbjct: 126 PLNPISSWTEQEKINLLRQVDDLARSSDSRIKQVNASLVGTQEVILVLNNEGCMAADIRP 185
Query: 443 LVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPA 501
LV+L V++I E G RE G +G GGR Y+YF D + +V AL+NL A APA
Sbjct: 186 LVRLNVSVIAEDKGVREQGFAGGGGRTGYSYFINDQVALHLTQEAVRLALLNLNAVKAPA 245
Query: 502 GIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANR 561
G M VVLGPGWPGILLHEA+GHGLEGDFNRKGSSAFSN IG+RIAS T+VD+GTL NR
Sbjct: 246 GTMPVVLGPGWPGILLHEAVGHGLEGDFNRKGSSAFSNRIGERIASPGCTVVDDGTLPNR 305
Query: 562 RGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTN 621
RGS+ IDDEG +Q T LIE GILK YM D +NARLM TGN RRESFAH+P+PRMTN
Sbjct: 306 RGSMTIDDEGTCSQRTVLIEKGILKAYMMDKLNARLMGTHSTGNGRRESFAHLPLPRMTN 365
Query: 622 TYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGA 681
TY+L G + PEEII++VK G+YA NFSGGQVDIT+GKFVFSA +AY+I+NG++T PVKGA
Sbjct: 366 TYLLPGPYVPEEIIATVKKGIYAVNFSGGQVDITSGKFVFSACEAYLIENGRVTQPVKGA 425
Query: 682 TLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
TLIG+GP++L VSMIG D+KLD G+G CGK+GQ VPVGVGQPTLKID++TVGGT
Sbjct: 426 TLIGNGPDVLTHVSMIGRDLKLDSGIGSCGKEGQSVPVGVGQPTLKIDALTVGGT 480
>gi|254428224|ref|ZP_05041931.1| TldD/PmbA family [Alcanivorax sp. DG881]
gi|196194393|gb|EDX89352.1| TldD/PmbA family [Alcanivorax sp. DG881]
Length = 481
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 249/476 (52%), Positives = 348/476 (73%), Gaps = 4/476 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L+IA S+LL P +L L +L + DYAD YFQ +++E W+LE+GIV+ +F+
Sbjct: 8 LSIAESVLLAPANLHTPQLASLLNGKLTGQADYADIYFQHSRHEAWVLEDGIVRDASFNT 67
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+G GVR + GDKT F YSDDI+ L A + R+I Q G+ + I+ + + Y
Sbjct: 68 ERGAGVRIVQGDKTGFAYSDDITLAALQQASGAARAITRQ--GQDRQIQ-LASRAATARY 124
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ D + +EK+ LL+R++ +AR DP +++V A+LS E DV+++ +DG + AD+R
Sbjct: 125 TAIDPLLGWPAQEKVALLQRIDAMARSLDPAIVEVTASLSAEQDVVMVVASDGTLAADVR 184
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAP 500
PL++ V++I E+ GRRE G++G GGR Y++ + +E +V AL+NLEA+ AP
Sbjct: 185 PLIRCNVSVIAERAGRRERGSAGGGGRVAYDWLLQEERIETWTREAVRGALLNLEAEAAP 244
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG M VVLGPGWPG+LLHEA+GHGLEGDFNRKG+S F+ +G+ +AS ++VD+GTL +
Sbjct: 245 AGTMPVVLGPGWPGVLLHEAVGHGLEGDFNRKGTSMFAKKMGELVASPLCSVVDDGTLMD 304
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+++DDEG P+ C TLIENG L GYMQD NARLM ++ TGN RRES+AH+P+PRMT
Sbjct: 305 RRGSLSVDDEGTPSACNTLIENGKLVGYMQDKTNARLMGVAPTGNGRRESYAHLPMPRMT 364
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYML G+ P++II+S+ G+YA NF+GGQVDIT+G+FVFS S+AY+++ GKI PVKG
Sbjct: 365 NTYMLPGESDPQDIIASLDRGIYAVNFAGGQVDITSGRFVFSTSEAYLVEKGKIVCPVKG 424
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
ATLIG G +++ +SM+GND+ LD G+GVCGKDGQ VPVGVGQPTL++D++TVGGT
Sbjct: 425 ATLIGSGAEVMRGISMVGNDLALDSGIGVCGKDGQSVPVGVGQPTLRVDALTVGGT 480
>gi|410859915|ref|YP_006975149.1| peptidase [Alteromonas macleodii AltDE1]
gi|410817177|gb|AFV83794.1| putative peptidase [Alteromonas macleodii AltDE1]
Length = 480
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 256/473 (54%), Positives = 353/473 (74%), Gaps = 7/473 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL LD L + L + ++ DYAD YFQ +++E+W+LE+GI+K G+++I +GVGVR
Sbjct: 9 LLSDSGLDITKLERALATIHRHDTDYADLYFQSSQHESWVLEDGIIKEGSYNIERGVGVR 68
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
AISG+KT F YSD+IS+ L A K+ R IA +G + + + + + YS + I
Sbjct: 69 AISGEKTGFAYSDEISEEALTKACKAARGIA--PSGGTQQVAALGHKPVEARYSENNPIL 126
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ EKI LL+ V+ R ++P +V+ +LSG Y+ IL+ +DG + DIRPLV+L
Sbjct: 127 AMQDAEKIALLKAVDAYIRKQEPSANQVVVSLSGVYEEILVAGSDGTLATDIRPLVRLNC 186
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTD-----MILEKCVSNSVNSALINLEAKPAPAGI 503
++++E+ RRE G++G GGRY Y++F E+ ++++ A +N+++ +PAG
Sbjct: 187 SVLLEQGDRRERGSAGAGGRYAYSFFKQDENGKPYFEQLADDALHMARVNMQSVASPAGA 246
Query: 504 MKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRG 563
M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+R+A+K +T+VD+GTL +RRG
Sbjct: 247 MPVVLGNGWPGVLLHEAVGHGLEGDFNRKGASTFSGRIGERVAAKGVTVVDDGTLNDRRG 306
Query: 564 SINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTY 623
S+++DDEG PT LIE+GILKGYMQD NA+LM ++ TGN RRES+AH+P+PRMTNTY
Sbjct: 307 SLSVDDEGTPTAHNVLIEDGILKGYMQDKHNAKLMGVAPTGNGRRESYAHLPMPRMTNTY 366
Query: 624 MLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATL 683
ML G+ P+EII+S+ G+YA NF+GGQVDIT+GKFVFS+++AY+I+NGKIT PVKGATL
Sbjct: 367 MLEGQHDPQEIIASIDKGIYAPNFAGGQVDITSGKFVFSSAEAYLIENGKITAPVKGATL 426
Query: 684 IGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
IG+GP +++K+SMIGND LD GVGVCGKDGQ VPVGVGQPTLKID +TVGGT
Sbjct: 427 IGNGPEVMQKISMIGNDTALDKGVGVCGKDGQSVPVGVGQPTLKIDELTVGGT 479
>gi|308188292|ref|YP_003932423.1| protein tldD [Pantoea vagans C9-1]
gi|308058802|gb|ADO10974.1| Protein tldD [Pantoea vagans C9-1]
Length = 481
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 261/481 (54%), Positives = 351/481 (72%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL ++++ L +LG + + ++DYAD YFQ + +E+W+LE+ I+K G++ I
Sbjct: 3 LNLVSEQLLTANGINQQDLFSLLGQLSERRLDYADLYFQSSFHESWVLEDKIIKDGSYHI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D I+ N L + ++ RSI Q NGK + + SL
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQITLNALRLSSEAARSIVREQGNGKAHTLSAVMN---RSL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
YS D +SS+ +KI LL RV+K+AR DPRV +V A+L+G Y+++L+ DG + AD+
Sbjct: 120 YSAVDPLSSLTREDKIALLHRVDKVARAADPRVQEVNASLTGVYELVLVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L +++ VE G+RE G SG G R Y +F D+ + +V AL+NL
Sbjct: 180 RPLVRLSISVQVEDQGKRERGASGGGARTGYAFFLEDENGDVRADAWAREAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG+++AS+ T+VD+
Sbjct: 240 AVAAPAGALPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGKIGQQVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTL RGS+ +DDEG P Q LIENG+LKGYMQD +NARLM +S TGN RRES+AH+P
Sbjct: 300 GTLEGLRGSLAVDDEGVPGQYNMLIENGVLKGYMQDKLNARLMGVSPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P++II SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+ GKIT
Sbjct: 360 MPRMTNTYMLAGKSSPQDIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIEKGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK+D +T+GG
Sbjct: 420 KPVKGATLIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLDKLTIGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|440761015|ref|ZP_20940113.1| TldD protein, part of proposed TldE, TldD proteolytic complex
[Pantoea agglomerans 299R]
gi|436425203|gb|ELP22942.1| TldD protein, part of proposed TldE, TldD proteolytic complex
[Pantoea agglomerans 299R]
Length = 481
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 261/481 (54%), Positives = 351/481 (72%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL ++++ L +LG + + ++DYAD YFQ + +E+W+LE+ I+K G++ I
Sbjct: 3 LNLVSEQLLTANGINQQDLFSLLGQLSERRLDYADLYFQSSFHESWVLEDKIIKDGSYHI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D I+ N L + ++ RSI Q NGK + + SL
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQITLNALRLSSEAARSIVREQGNGKAHTLSAVMN---RSL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
YS D +SS+ +KI LL RV+K+AR DPRV +V A+L+G Y+ +L+ DG + AD+
Sbjct: 120 YSAVDPLSSLTREDKIALLHRVDKVARAADPRVQEVNASLTGVYEQVLVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L +++ VE G+RE G SG G R Y +F ++ + +V AL+NL
Sbjct: 180 RPLVRLSISVQVEDQGKRERGASGGGARTGYTFFLADENGEVRADAWAREAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG+++AS+ T+VD+
Sbjct: 240 AVAAPAGALPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGKIGQQVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTL RGS+ +DDEG P Q LIENG+LKGYMQD +NARLM +S TGN RRES+AH+P
Sbjct: 300 GTLEGLRGSLAVDDEGVPGQYNMLIENGVLKGYMQDKLNARLMGVSPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P++II SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGKIT
Sbjct: 360 MPRMTNTYMLAGKSSPQDIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK+D +T+GG
Sbjct: 420 KPVKGATLIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLDKLTIGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|163750440|ref|ZP_02157679.1| tldD protein [Shewanella benthica KT99]
gi|161329761|gb|EDQ00749.1| tldD protein [Shewanella benthica KT99]
Length = 483
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 260/480 (54%), Positives = 359/480 (74%), Gaps = 9/480 (1%)
Query: 263 NIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSIN 322
+ +S+L + LD+ L L + ++ +D++D YFQ +++E+W+LE+GIVK G+F I
Sbjct: 6 QVEQSLLQDELSLDD--LQGYLKLIHQHDIDFSDLYFQSSRHESWVLEDGIVKEGSFHIE 63
Query: 323 QGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYS 382
+GVGVRAI+G+KT F Y+D+I+ L + ++ RSIA G+ ++ K+ ++ +LY
Sbjct: 64 RGVGVRAITGEKTGFAYADEITHAALTASSEAARSIAAH-GGESASVQAWKRREMKALYQ 122
Query: 383 FTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRP 442
D I+++ +KI LL++ + R D R+I+V+ +LSG ++ ILI +DG + ADIRP
Sbjct: 123 SDDPIAAMEEVKKIALLKQADAYIRSLDSRIIQVVISLSGVHEEILIVASDGTLAADIRP 182
Query: 443 LVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF---TDMILEKC---VSNSVNSALINLEA 496
LV+ ++I+E+NG+RE G SG GGR++Y D L C +V A++NL A
Sbjct: 183 LVRFNCSVILEENGKRERGASGGGGRHDYQVMMETDDAGLPVCFEFAREAVRQAVVNLTA 242
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M V+LGPGWPG+LLHEA+GHGLEGDFNRKGSSAFS +G+++ASK +T+VD+G
Sbjct: 243 IDAPAGEMPVILGPGWPGVLLHEAVGHGLEGDFNRKGSSAFSGKLGQQVASKLVTVVDDG 302
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS+++DDEG TQ T LI++GILKGYMQD +NARLM + TGN RRES+AH+P+
Sbjct: 303 TMVNRRGSLSVDDEGVQTQKTVLIQDGILKGYMQDKLNARLMGVQSTGNGRRESYAHLPM 362
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYM G+ P E+I SVKNG+YA NF GGQVDIT+GKFVFSAS+AY+I+NG++T
Sbjct: 363 PRMTNTYMEAGESDPAEMIKSVKNGIYAPNFGGGQVDITSGKFVFSASEAYLIENGEVTQ 422
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
+KGATLIG+GP +K++SM+GND+ LD GVGVCGKDGQ +PVGVGQPTLKID +TVGGT
Sbjct: 423 AIKGATLIGNGPEAMKQISMVGNDLALDQGVGVCGKDGQSIPVGVGQPTLKIDKLTVGGT 482
>gi|345871562|ref|ZP_08823506.1| peptidase U62 modulator of DNA gyrase [Thiorhodococcus drewsii AZ1]
gi|343920220|gb|EGV30956.1| peptidase U62 modulator of DNA gyrase [Thiorhodococcus drewsii AZ1]
Length = 480
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 273/481 (56%), Positives = 356/481 (74%), Gaps = 9/481 (1%)
Query: 261 PLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFS 320
P+ IAR +LEP L ++ L ++LG + + VD AD YFQ ++ ++W+LE+GI+K GNFS
Sbjct: 4 PIVIARESILEPAGLLDRDLDRLLGTLASSSVDAADIYFQSSRLQSWVLEDGIIKDGNFS 63
Query: 321 INQGVGVRAISGDKTAFFYSDDIS-KNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINS 379
I QG G+RAISG+KT F YSD++ A + +G KI + + + +
Sbjct: 64 IEQGAGLRAISGEKTGFAYSDELQFPALAQAAEAARAIARAGQSGSAKIGQALAERR--- 120
Query: 380 LYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVAD 439
LY + I+S++ +K+ LL+RV+ AR DPRV +V+A+L D +L+ +DG + AD
Sbjct: 121 LYEPLNPIASLSDPDKVALLQRVDAEARRIDPRVREVVASLVAVQDTVLVLADDGTLAAD 180
Query: 440 IRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVS---NSVNSALINLEA 496
+RPLV+L V +I E+ GRRE G+SG G R + YF +I ++ ++ +V AL NLEA
Sbjct: 181 VRPLVRLSVNVIAEEAGRREQGSSGGGARADLGYF--LIEDRALTFAREAVRLALTNLEA 238
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEAIGHGLEGDFNRKGSSAFS IG+R+A+ +T+VD+G
Sbjct: 239 GDAPAGAMTVVLGAGWPGVLLHEAIGHGLEGDFNRKGSSAFSGRIGQRVAAPGVTVVDDG 298
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL RRGS+N+DDEG TQ T LIE+GIL+GYMQD +NARL TGN RRES+AH+P+
Sbjct: 299 TLPGRRGSLNMDDEGTVTQNTVLIEDGILRGYMQDKLNARLTGTRSTGNGRRESYAHLPM 358
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ PEEII+SV GLYA NF GGQVDIT+GKFVFSAS+AY+I+NG+I
Sbjct: 359 PRMTNTYMLAGERDPEEIIASVDKGLYAVNFGGGQVDITSGKFVFSASEAYLIENGRIGR 418
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG+GP++L +VSMIGND+KLD GVG CGK+GQ VPVGVGQPTL+IDS+TVGGT
Sbjct: 419 PVKGATLIGNGPDVLTRVSMIGNDLKLDEGVGTCGKEGQSVPVGVGQPTLRIDSLTVGGT 478
Query: 737 N 737
+
Sbjct: 479 S 479
>gi|352104406|ref|ZP_08960372.1| protease TldD [Halomonas sp. HAL1]
gi|350598872|gb|EHA14974.1| protease TldD [Halomonas sp. HAL1]
Length = 483
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 258/477 (54%), Positives = 350/477 (73%), Gaps = 3/477 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
++ A +ILL P LD L LG +DYAD YFQ T E W+LE+ VK +++I
Sbjct: 8 VDTAAAILLTPGGLDLDALETGLGYAMGAGIDYADLYFQRTWQEGWVLEDSEVKEASYNI 67
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+ GVGVR+++G+KT F YS+ I+ + L++ ++ I +GK + + + S Y
Sbjct: 68 DGGVGVRSLAGEKTGFAYSNQITADALMDTGRTAAGIVR--SGKRLPGQLVSPVSAMSRY 125
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ D ++ ++ EK+ +L++ +++AR DP + +V A+LSG Y+V+L+ +DG + ADIR
Sbjct: 126 AGIDPLAGLSAEEKVAMLKQADRVARAADPSISQVSASLSGTYEVVLVRASDGTLAADIR 185
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAP 500
PLV+ V++I KNGRRE G++G GGRY+ D + E +V AL+NLEA AP
Sbjct: 186 PLVRFNVSVIAVKNGRRERGSAGGGGRYSMAKLRDDQVAEHYAKEAVRQALVNLEAIDAP 245
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG M VVL GWPGILLHEA+GHGLEGDFNRKGSSAF+ +G+R+A+K +TIVD+ T+++
Sbjct: 246 AGQMPVVLASGWPGILLHEAVGHGLEGDFNRKGSSAFAGKMGERVAAKGVTIVDDATISD 305
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RGS+++DDEG P Q T LIE+GIL GYMQD +NARLM M+ TGNARRESFAH+P+PRMT
Sbjct: 306 SRGSMSVDDEGTPGQYTPLIEDGILTGYMQDKLNARLMGMAPTGNARRESFAHLPMPRMT 365
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NT ML G+ P +II SVK G+YA +F GGQVDIT+GKFVFSAS+AY+I++GK+T PVKG
Sbjct: 366 NTVMLAGQDEPSDIIKSVKRGIYAVSFGGGQVDITSGKFVFSASEAYLIEDGKVTAPVKG 425
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
ATLIG+GP +++VSMIG+DM LD G+GVCGK+GQ VPVGVGQPTLK+D +TVGGT
Sbjct: 426 ATLIGNGPEAMQRVSMIGHDMALDTGIGVCGKEGQGVPVGVGQPTLKLDELTVGGTQ 482
>gi|430762665|ref|YP_007218522.1| TldD protein, part of proposed TldE/TldD proteolytic complex
[Thioalkalivibrio nitratireducens DSM 14787]
gi|430012289|gb|AGA35041.1| TldD protein, part of proposed TldE/TldD proteolytic complex
[Thioalkalivibrio nitratireducens DSM 14787]
Length = 480
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 270/476 (56%), Positives = 351/476 (73%), Gaps = 2/476 (0%)
Query: 263 NIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSIN 322
N+ R LLEP + E L +L F D D YFQF +E W LE+G+VK+ +F+I
Sbjct: 4 NLVRETLLEPGGVTEAQLGDVLAAAFGRGTDGGDCYFQFICHEGWSLEDGLVKSASFNIE 63
Query: 323 QGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYS 382
+GVG+R I+G++T F YSD+I+ ++ A ++ RSIA ++ ++ LY
Sbjct: 64 RGVGIRVIAGEQTGFAYSDEITLPAMLEAGRTARSIARVGQTASAAVRP-GAVRDVPLYL 122
Query: 383 FTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRP 442
D + S++ KI+LL+ V+ +AR DPRV +VI +LSG +++L+ +G +V D+RP
Sbjct: 123 PVDPLGSLDEGRKIELLKHVDAVARAADPRVTQVICSLSGVREMVLVLNAEGELVTDLRP 182
Query: 443 LVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVS-NSVNSALINLEAKPAPA 501
LV+L V ++VE++GRRE GN+G GGR Y+YFTD + +V AL+NLEA+ APA
Sbjct: 183 LVRLNVQVLVEQDGRRESGNAGGGGRSGYDYFTDDDRAGAYAREAVRQALVNLEAEDAPA 242
Query: 502 GIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANR 561
G MKVVLG GWPG+LLHEAIGHGLEGDFNRKG+SAF+ IG+R+A+ ITIVD+GTL R
Sbjct: 243 GTMKVVLGSGWPGVLLHEAIGHGLEGDFNRKGTSAFAGRIGERVAAPGITIVDDGTLPGR 302
Query: 562 RGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTN 621
RGS+N+DDEG TQ T LIE+GIL+GYMQD +N RL TGN RRES+AH+P+PRMTN
Sbjct: 303 RGSLNVDDEGTVTQRTVLIEDGILRGYMQDRLNGRLSGSRSTGNGRRESYAHLPMPRMTN 362
Query: 622 TYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGA 681
TYML G PEEII+SV GLYA NF GGQVDIT+GKFVFSAS+AY+I+NG++T PVKGA
Sbjct: 363 TYMLAGDREPEEIIASVDRGLYAVNFGGGQVDITSGKFVFSASEAYLIENGRVTRPVKGA 422
Query: 682 TLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
TLIGHGP++L +VSMIGND++LD GVG CGK+GQ VPVGVGQPTL+ID +TVGGT
Sbjct: 423 TLIGHGPDVLTRVSMIGNDLELDTGVGTCGKEGQGVPVGVGQPTLRIDGMTVGGTQ 478
>gi|304396977|ref|ZP_07378857.1| peptidase U62 modulator of DNA gyrase [Pantoea sp. aB]
gi|304355773|gb|EFM20140.1| peptidase U62 modulator of DNA gyrase [Pantoea sp. aB]
Length = 481
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 261/481 (54%), Positives = 351/481 (72%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL ++++ L +LG + + ++DYAD YFQ + +E+W+LE+ I+K G++ I
Sbjct: 3 LNLVSEQLLTANGINQQDLFSLLGQLSERRLDYADLYFQSSFHESWVLEDKIIKDGSYHI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D I+ N L + ++ RSI Q NGK + + SL
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQITLNALRLSSEAARSIVREQGNGKAHTLSAVMN---RSL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
YS D +SS+ +KI LL RV+K+AR DPRV +V A+L+G Y+ +L+ DG + AD+
Sbjct: 120 YSAVDPLSSLTREDKIALLHRVDKVARAADPRVQEVNASLTGVYEQVLVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L +++ VE G+RE G SG G R Y +F ++ + +V AL+NL
Sbjct: 180 RPLVRLSISVQVEDQGKRERGASGGGARTGYTFFLEDENGEVRADAWAREAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG+++AS+ T+VD+
Sbjct: 240 AVAAPAGALPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGKIGQQVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTL RGS+ +DDEG P Q LIENG+LKGYMQD +NARLM +S TGN RRES+AH+P
Sbjct: 300 GTLEGLRGSLAVDDEGVPGQYNMLIENGVLKGYMQDKLNARLMGVSPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P++II SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGKIT
Sbjct: 360 MPRMTNTYMLAGKSSPQDIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK+D +T+GG
Sbjct: 420 KPVKGATLIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLDKLTIGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|332139675|ref|YP_004425413.1| putative peptidase [Alteromonas macleodii str. 'Deep ecotype']
gi|327549697|gb|AEA96415.1| putative suppressor of CsrA inhibitory activity; putative
peptidase; involved in the control of DNA gyrase
[Alteromonas macleodii str. 'Deep ecotype']
Length = 480
Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust.
Identities = 256/473 (54%), Positives = 353/473 (74%), Gaps = 7/473 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL LD L + L + ++ DYAD YFQ +++E+W+LE+GI+K G+++I +GVGVR
Sbjct: 9 LLSDSGLDITKLERALATIHRHDTDYADLYFQSSQHESWVLEDGIIKEGSYNIERGVGVR 68
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
AISG+KT F YSD+IS+ L A K+ R IA +G + + + + + YS + I
Sbjct: 69 AISGEKTGFAYSDEISEEALTKACKAARGIA--PSGGTQQVAALGHKPVEARYSENNPIL 126
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ EKI LL+ V+ R ++P +V+ +LSG Y+ IL+ +DG + DIRPLV+L
Sbjct: 127 AMQDAEKIGLLKAVDAYIRKQEPSANQVVVSLSGVYEEILVAGSDGTLATDIRPLVRLNC 186
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTD-----MILEKCVSNSVNSALINLEAKPAPAGI 503
++++E+ RRE G++G GGRY Y++F E+ ++++ A +N+++ +PAG
Sbjct: 187 SVLLEQGDRRERGSAGAGGRYAYSFFKQDENGKPYFEQLADDALHMARVNMQSVASPAGA 246
Query: 504 MKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRG 563
M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+R+A+K +T+VD+GTL +RRG
Sbjct: 247 MPVVLGNGWPGVLLHEAVGHGLEGDFNRKGASTFSGRIGERVAAKGVTVVDDGTLNDRRG 306
Query: 564 SINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTY 623
S+++DDEG PT LIE+GILKGYMQD NA+LM ++ TGN RRES+AH+P+PRMTNTY
Sbjct: 307 SLSVDDEGTPTAHNVLIEDGILKGYMQDKHNAKLMGVAPTGNGRRESYAHLPMPRMTNTY 366
Query: 624 MLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATL 683
ML G+ P+EII+S+ G+YA NF+GGQVDIT+GKFVFS+++AY+I+NGKIT PVKGATL
Sbjct: 367 MLEGQHDPQEIIASIDKGIYAPNFAGGQVDITSGKFVFSSAEAYLIENGKITAPVKGATL 426
Query: 684 IGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
IG+GP +++K+SMIGND LD GVGVCGKDGQ VPVGVGQPTLKID +TVGGT
Sbjct: 427 IGNGPEVMQKISMIGNDTALDKGVGVCGKDGQSVPVGVGQPTLKIDELTVGGT 479
>gi|261381285|ref|ZP_05985858.1| TldD protein [Neisseria subflava NJ9703]
gi|284795765|gb|EFC51112.1| TldD protein [Neisseria subflava NJ9703]
Length = 480
Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust.
Identities = 263/470 (55%), Positives = 348/470 (74%), Gaps = 3/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LLE L +L + L + N VDYAD Y Q T E+W LEEGIVK+G+F I+QGVGVR
Sbjct: 12 LLEANHLSPDLLAQSLSIIGANHVDYADIYCQRTAYESWHLEEGIVKSGSFQIDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+SGDKTAF Y+D + +++ + K+ R I + G +K ++ D I+
Sbjct: 72 AVSGDKTAFAYADSLCIDSINRSAKAVRVIG--AAGGEASVKVPTPAYGKPVHMAIDPIA 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
S++ K+ LL +VE +A+ DPR+++V+A L+ EYD++ I R DG ADIRP+V++ V
Sbjct: 130 SLDSAAKVALLNKVETLAKAADPRIVQVMAGLTCEYDMVYIARLDGKHAADIRPMVRMNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVL 508
T+I ++ RRE G++G GGRY+ YF + ++ + V ++V AL NLE++PAPAG M VVL
Sbjct: 190 TVIAKQGERREQGSAGGGGRYDLAYFDENLVHRFVDSAVKQALTNLESRPAPAGEMTVVL 249
Query: 509 GPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINID 568
G GWPG+LLHEA+GHGLEGDFNRK +S FS IG+R+A+K +T+VD G +A+RRGS+NID
Sbjct: 250 GNGWPGVLLHEAVGHGLEGDFNRKETSVFSGRIGERVAAKGVTVVDQGDIADRRGSLNID 309
Query: 569 DEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGK 628
DEGN T+ T LIE+GIL GYMQD NARLM M TGN RRES+A P+PRMTNT+M NG
Sbjct: 310 DEGNETRRTVLIEDGILVGYMQDETNARLMGMQSTGNGRRESYASAPMPRMTNTFMENGG 369
Query: 629 FHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGP 688
+ PEEII+S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++ GK+ YPVKGAT+IG+GP
Sbjct: 370 YEPEEIIASIDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEGGKLQYPVKGATIIGNGP 429
Query: 689 NILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS-ITVGGTN 737
+LK VSMIGND LD G+GVCGK+GQ VPVGVGQPTL+ID+ +TVGG+
Sbjct: 430 EVLKHVSMIGNDTALDSGIGVCGKEGQSVPVGVGQPTLRIDAGLTVGGSE 479
>gi|386817997|ref|ZP_10105215.1| microcin-processing peptidase 2 [Thiothrix nivea DSM 5205]
gi|386422573|gb|EIJ36408.1| microcin-processing peptidase 2 [Thiothrix nivea DSM 5205]
Length = 482
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 255/479 (53%), Positives = 352/479 (73%), Gaps = 4/479 (0%)
Query: 260 HPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNF 319
++ AR+ LEP L E+ L ++ + AD YFQ + E+W LEEGI+K+G++
Sbjct: 3 QAIDFARAAFLEPAGLTEQHLEQVFSQLLTKDTTLADLYFQSARYESWGLEEGIIKSGSY 62
Query: 320 SINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKIN 378
SI QGVGVR++ G++T F YS +IS L+ + K+ +I+ NG + K +
Sbjct: 63 SIEQGVGVRSVCGEQTGFAYSGEISLAALLESAKAASAISRAGQNGSVNAWKVTTPSR-- 120
Query: 379 SLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVA 438
SLY D ++S++ +KI L +++ +AR P V +V+AN+ +++I+I G + A
Sbjct: 121 SLYGTDDPLNSLSEEDKIGFLRQIDSLARAASPYVQQVMANMVAVHEIIMIVDESGRMTA 180
Query: 439 DIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTD-MILEKCVSNSVNSALINLEAK 497
D+RPLV+ V++IVE+NG+ E +G GGR++ ++F + ++ +V ALINL+A+
Sbjct: 181 DVRPLVRANVSVIVERNGQTESATAGGGGRFSLDFFLNGHKAQEYAEEAVRKALINLDAE 240
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
APAG M VVLG GWPG+LLHEAIGHGLEGDFNRKG+SAF+ IG+++A+K IT+VD+GT
Sbjct: 241 AAPAGSMTVVLGNGWPGVLLHEAIGHGLEGDFNRKGTSAFAGRIGEQVAAKGITVVDDGT 300
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
L RRGS+++DDEG TQCTTLIE+GILKGYM D NA LMN TGN RR+S+AH+P+P
Sbjct: 301 LEQRRGSLSVDDEGTQTQCTTLIEDGILKGYMFDRQNAALMNTQSTGNGRRQSYAHLPMP 360
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNTYM G++ PEEII+SV G+YA NFSGGQVDIT+GKFVFSAS+AY+I+NGK+ P
Sbjct: 361 RMTNTYMRAGEYAPEEIIASVDKGIYAVNFSGGQVDITSGKFVFSASEAYVIENGKLGKP 420
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
+K ATLIG+GP++L +VSM+GND++LD G+GVCGKDGQ VPVGVGQPTL++D +TVGGT
Sbjct: 421 LKNATLIGNGPDVLTRVSMVGNDLQLDTGIGVCGKDGQSVPVGVGQPTLRVDGLTVGGT 479
>gi|294637789|ref|ZP_06716062.1| TldD protein [Edwardsiella tarda ATCC 23685]
gi|451966634|ref|ZP_21919886.1| TldD protein [Edwardsiella tarda NBRC 105688]
gi|291089029|gb|EFE21590.1| TldD protein [Edwardsiella tarda ATCC 23685]
gi|451314551|dbj|GAC65248.1| TldD protein [Edwardsiella tarda NBRC 105688]
Length = 481
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 255/474 (53%), Positives = 349/474 (73%), Gaps = 9/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL +L+ + L +LG + + ++DYAD YFQ + +E+W+LE+ I+K G++ I+QGVGVR
Sbjct: 10 LLAANNLNHQDLYNVLGQLGERRLDYADLYFQSSVHESWVLEDRIIKDGSYHIDQGVGVR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSLYSFTDTI 387
AI G+KT F Y+D I+ L + + RSI Q +G+ + ++ + + Y+ D +
Sbjct: 70 AIHGEKTGFAYADQITLQALTQSAHAARSIVREQGDGRAHTLGGLEAV---ARYAMHDPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S+ EKI LL V+++AR +D RV +V A+L+G Y+++L+ NDG + AD+RPLV+L
Sbjct: 127 DSLPREEKIALLALVDRVARAEDARVQEVNASLTGVYELVLVAANDGTLAADVRPLVRLS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEAKPAPAG 502
V+++VE+ GRRE G+ G G R Y+YF ++ E +V AL+NL A APAG
Sbjct: 187 VSVLVEQEGRRERGSCGGGARCGYDYFLASSDGEVRAEAYAREAVRMALVNLHAVAAPAG 246
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+++AS T+VD+GTL RR
Sbjct: 247 TMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQLGQQVASPLCTVVDDGTLEGRR 306
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+ +DDEG P Q LIE GIL+GYMQD +NARLM M+ TGN RRES+AH+P+PRMTNT
Sbjct: 307 GSLAVDDEGVPGQYNVLIEKGILRGYMQDKLNARLMGMAPTGNGRRESYAHLPMPRMTNT 366
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML G+ P+ II SV+ GLYA NF+GGQVDIT+GKFVFS S+AY+I+ G+IT+PVKGAT
Sbjct: 367 YMLAGESTPQAIIESVEYGLYAPNFAGGQVDITSGKFVFSTSEAYLIEKGRITHPVKGAT 426
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
LIG G ++++SM+GND+ LD GVGVCGK+GQ VPVGVGQPTLK+D++TVGGT
Sbjct: 427 LIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSVPVGVGQPTLKLDAMTVGGT 480
>gi|349611081|ref|ZP_08890395.1| hypothetical protein HMPREF1028_02370 [Neisseria sp. GT4A_CT1]
gi|348614969|gb|EGY64504.1| hypothetical protein HMPREF1028_02370 [Neisseria sp. GT4A_CT1]
Length = 498
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 264/470 (56%), Positives = 351/470 (74%), Gaps = 3/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LLE L ++L K L + + VDYAD Y Q T E+W LEEGIVK+G+F I+QGVGVR
Sbjct: 30 LLEANHLSPELLAKSLSIIGAHHVDYADIYCQRTAFESWHLEEGIVKSGSFQIDQGVGVR 89
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+SG+KTAF Y+D + +++ + ++ R I + G +K S+++ + I
Sbjct: 90 AVSGEKTAFAYADSLCIDSINRSAQAVRVIG--AAGGEASVKVPSAAYGKSVHAVLNPII 147
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ K+ LL +VE +A+ DPR+++V+A L+ EYD+I I R DG ADIRP+V+L V
Sbjct: 148 GLDSAAKVALLNKVETLAKAADPRIVQVMAGLTCEYDMIYIARLDGRHAADIRPMVRLNV 207
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVL 508
T+I ++ RRE G++G GGRY+ YF + ++ + V ++V ALINLE++PAPAG M VVL
Sbjct: 208 TVIAKQGDRREQGSAGGGGRYDLAYFDETLVRQFVDSAVKQALINLESRPAPAGEMTVVL 267
Query: 509 GPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINID 568
G GWPG+LLHEA+GHGLEGDFNRK +S FS IG+R+A+K +T+VD G +A+RRGS+NID
Sbjct: 268 GNGWPGVLLHEAVGHGLEGDFNRKETSVFSGRIGERVAAKGVTVVDQGDIADRRGSLNID 327
Query: 569 DEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGK 628
DEGN T+ T LIE+GIL GYMQD NARLM+ TGN RRES+A P+PRMTNT+M NG
Sbjct: 328 DEGNETRRTVLIEDGILVGYMQDETNARLMDTQSTGNGRRESYASAPMPRMTNTFMENGG 387
Query: 629 FHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGP 688
+ P+EII+S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++ GK+ YPVKGAT+IG+GP
Sbjct: 388 YEPDEIIASIDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEGGKLQYPVKGATIIGNGP 447
Query: 689 NILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS-ITVGGTN 737
++LK VSMIGND LD GVGVCGKDGQ VPVGVGQPTL+IDS +TVGG+
Sbjct: 448 DVLKHVSMIGNDTALDSGVGVCGKDGQSVPVGVGQPTLRIDSGLTVGGSE 497
>gi|374621952|ref|ZP_09694481.1| TldD protein [Ectothiorhodospira sp. PHS-1]
gi|373941082|gb|EHQ51627.1| TldD protein [Ectothiorhodospira sp. PHS-1]
Length = 481
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 266/479 (55%), Positives = 357/479 (74%), Gaps = 6/479 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L+ AR LLEP L E L ++LG + +D D YFQ +++E+W+LE+GIVK ++I
Sbjct: 5 LDTARLHLLEPAGLTEADLDRVLGTLCGPGLDGGDLYFQLSRHESWMLEDGIVKDAGYNI 64
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSL 380
QGVGVRA+SGDKT F YSD+I +L+ A ++ R+I + +G + + + + + L
Sbjct: 65 EQGVGVRALSGDKTGFAYSDEILLPSLMEAGRAARAIGRDHRDGTVPVRR---REAGHRL 121
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y D + +++ KI LL+R++ AR +DPRV +VI +L+G ++V+++ DG + AD+
Sbjct: 122 YLPVDPLGTLDENAKIDLLQRLDAEARRQDPRVSQVIVSLAGVHEVVMVMHTDGTVAADV 181
Query: 441 RPLVQLFVTIIVEKN-GRREIGNSGCGGRYNYNYFTDMILE-KCVSNSVNSALINLEAKP 498
RPLV+L V +I E + GRRE G+SG GGR Y +F D +V AL+NLEA
Sbjct: 182 RPLVRLNVHVIAEDDKGRREQGSSGGGGRSGYEFFLDQDRGLGYAREAVRQALVNLEADE 241
Query: 499 APAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL 558
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+SAFSN +G+++A+ +T+VD+GTL
Sbjct: 242 APAGTMTVVLGSGWPGVLLHEAVGHGLEGDFNRKGTSAFSNRLGQKVAASGVTVVDDGTL 301
Query: 559 ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPR 618
A RRGS+N+DDEG PTQ T LIE+GILKGYMQD +NA LM ++ TGN RRES+AH+P+PR
Sbjct: 302 AGRRGSLNVDDEGIPTQSTVLIEDGILKGYMQDRLNAGLMGLAPTGNGRRESYAHLPMPR 361
Query: 619 MTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPV 678
MTNTYML G P EII+SV GLYA NF GGQVDIT+GKFVFSAS+AY+I+ GK+T PV
Sbjct: 362 MTNTYMLAGAHDPGEIIASVDKGLYAVNFGGGQVDITSGKFVFSASEAYLIEGGKVTRPV 421
Query: 679 KGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
+GATLIG+GP ++ ++SM+GND+ LD GVG CGK+GQ VPVGVGQPTL++D +TVGGT+
Sbjct: 422 RGATLIGNGPEVMSRISMVGNDLALDTGVGTCGKEGQSVPVGVGQPTLRVDGLTVGGTS 480
>gi|372276497|ref|ZP_09512533.1| protease TldD [Pantoea sp. SL1_M5]
Length = 481
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 261/481 (54%), Positives = 349/481 (72%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL ++++ L +LG + + ++DYAD YFQ + +E+W+LE+ I+K G++ I
Sbjct: 3 LNLVSEQLLTANGINQQDLFSLLGQLSERRLDYADLYFQSSFHESWVLEDKIIKDGSYHI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D I+ N L + ++ RSI Q NGK + + SL
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQITLNALRLSSEAARSIVREQGNGKAHTLSAVMN---RSL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y D +SS+ +KI LL RV+K+AR DPRV +V A+L+G Y+ +L+ DG + AD+
Sbjct: 120 YQAVDPLSSLTREDKIALLHRVDKVARAADPRVQEVNASLTGVYEQVLVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L +++ VE G+RE G SG G R Y +F ++ + +V AL+NL
Sbjct: 180 RPLVRLSISVQVEDQGKRERGASGGGARTGYAFFLADEDGEVRADAWAREAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG+++AS T+VD+
Sbjct: 240 AVAAPAGALPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGKIGQQVASDLCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTL RGS+ +DDEG P Q LIENG+LKGYMQD +NARLM +S TGN RRES+AH+P
Sbjct: 300 GTLEGLRGSLAVDDEGVPGQYNMLIENGVLKGYMQDKLNARLMGVSPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P++II SV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+NGKIT
Sbjct: 360 MPRMTNTYMLAGKSSPQDIIESVEYGLYAPNFGGGQVDITSGKFVFSTSEAYLIENGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK+D +T+GG
Sbjct: 420 KPVKGATLIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLDKLTIGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|407698469|ref|YP_006823256.1| peptidase [Alteromonas macleodii str. 'Black Sea 11']
gi|407247616|gb|AFT76801.1| putative peptidase [Alteromonas macleodii str. 'Black Sea 11']
Length = 480
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 255/473 (53%), Positives = 353/473 (74%), Gaps = 7/473 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL LD L + L + ++ DYAD YFQ +++E+W+LE+GI+K G+++I +GVGVR
Sbjct: 9 LLSDSGLDITKLERALATIHRHDTDYADLYFQSSQHESWVLEDGIIKEGSYNIERGVGVR 68
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
AISG+KT F YSD+IS+ L A K+ R IA +G + + + + + + YS + I
Sbjct: 69 AISGEKTGFAYSDEISEEALTKACKAARGIA--PSGGTQQVAALGQKPVQARYSENNPIL 126
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ EKI LL+ V+ R ++P +V+ +LSG Y+ IL+ +DG + DIRPLV+L
Sbjct: 127 AMQDAEKISLLKAVDAYIRKQEPSANQVVVSLSGVYEEILVAGSDGTLATDIRPLVRLNC 186
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTD-----MILEKCVSNSVNSALINLEAKPAPAGI 503
++++E+ RRE G++G GGRY Y++F + ++++ A +N+++ +PAG
Sbjct: 187 SVLLEQGDRRERGSAGAGGRYAYSFFKQDENGKPYYKTLAEDALHMARVNMQSVASPAGA 246
Query: 504 MKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRG 563
M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+R+A+K +T+VD+GTL +RRG
Sbjct: 247 MPVVLGNGWPGVLLHEAVGHGLEGDFNRKGASTFSGRIGQRVAAKGVTVVDDGTLNDRRG 306
Query: 564 SINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTY 623
S+++DDEG PT LIE+GILKGYMQD NA+LM ++ TGN RRES+AH+P+PRMTNTY
Sbjct: 307 SLSVDDEGTPTAHNVLIEDGILKGYMQDKHNAKLMGVAPTGNGRRESYAHLPMPRMTNTY 366
Query: 624 MLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATL 683
ML G+ P+EII+S+ G+YA NF+GGQVDIT+GKFVFS+++AY+I+NGKIT PVKGATL
Sbjct: 367 MLEGQHDPQEIIASIDKGIYAPNFAGGQVDITSGKFVFSSAEAYLIENGKITAPVKGATL 426
Query: 684 IGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
IG+GP +++K+SMIGND LD GVGVCGKDGQ VPVGVGQPTLKID +TVGGT
Sbjct: 427 IGNGPEVMQKISMIGNDTALDKGVGVCGKDGQSVPVGVGQPTLKIDELTVGGT 479
>gi|212212169|ref|YP_002303105.1| microcin-processing peptidase 2 [Coxiella burnetii CbuG_Q212]
gi|212010579|gb|ACJ17960.1| microcin-processing peptidase 2 [Coxiella burnetii CbuG_Q212]
Length = 477
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 263/476 (55%), Positives = 347/476 (72%), Gaps = 3/476 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+ A LL PF+L+ +L KI+G VD AD + Q + E+W LE+GIVK GNFSI
Sbjct: 5 IQTASDSLLRPFNLNANVLEKIIGRAMGRSVDGADIFLQSIQEESWFLEDGIVKEGNFSI 64
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+ G G+R +SG++T F ++DDI+ L+ A +SIA +G+ I + K + LY
Sbjct: 65 DHGFGLRVLSGEETGFAFADDINAKALLQAAHLAKSIAYSQSGQA--INVLHKTLVRPLY 122
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
++ I+S+ + LL RV+ AR KDPRV +VI +L+G+++V+LI +DGL+ AD+R
Sbjct: 123 PPSNPINSMPAASIVDLLRRVDDYARAKDPRVKQVIVSLTGQHEVVLILNSDGLMAADLR 182
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPA 501
PLV + V +IVE+NG+R G++G G R Y FT + +V+ A +NL+A APA
Sbjct: 183 PLVSMRVRVIVEENGQRAQGSAGGGARGVYETFTSAAFQYA-DKAVHQACLNLKADNAPA 241
Query: 502 GIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANR 561
G +VLGPGWP ILLHEAIGHGLEGDFNRKGSSAFS +G+R+AS T+VD+GT+ R
Sbjct: 242 GTFPIVLGPGWPAILLHEAIGHGLEGDFNRKGSSAFSGRLGERVASSLCTVVDDGTVPGR 301
Query: 562 RGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTN 621
RGS++IDDEG TQ T LIE GILK YMQD NA LM MS TGN RRES+AH+P+PRMTN
Sbjct: 302 RGSLSIDDEGTMTQKTVLIEKGILKNYMQDRHNAHLMKMSPTGNGRRESYAHLPLPRMTN 361
Query: 622 TYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGA 681
TY+L G+ P+EII+SV+ GLYA +FSGGQVDIT+GKFVFS S+AY+I+ GK+T PVKGA
Sbjct: 362 TYLLPGESDPQEIIASVERGLYAVDFSGGQVDITSGKFVFSTSEAYLIEKGKVTRPVKGA 421
Query: 682 TLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
TLIG+GP++L KVSM+GND+ LD G+G CGK GQ VPVGVGQPT+K+D++TVGG +
Sbjct: 422 TLIGNGPDVLTKVSMVGNDLALDSGIGTCGKAGQSVPVGVGQPTIKVDALTVGGVD 477
>gi|398845233|ref|ZP_10602275.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM84]
gi|398253776|gb|EJN38891.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM84]
Length = 479
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 265/469 (56%), Positives = 351/469 (74%), Gaps = 2/469 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L L +LG + +D AD YFQ +E W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGLTLDSLQAVLGELAGPGIDAADLYFQGQISETWALEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ L +A ++ RSI+ G+ ++ + + +LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAINLEALTSAARAARSISRA--GQNGTVQAFRSQDVAALYAPDNPLD 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ EK++LL+RV+ R DPR+ +V +++G ++ IL+ DG + AD+RPLV+ V
Sbjct: 130 VLSRAEKVELLKRVDAATRALDPRIQQVTVSMAGVWERILVAAADGSLAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVL 508
++IVE+NGRRE G G GGR +Y +FT+ + ++ AL+NLEA PAPAG + VVL
Sbjct: 190 SVIVEQNGRRERGGQGGGGRTDYRFFTEEKVMGYAREALRQALVNLEAIPAPAGTLPVVL 249
Query: 509 GPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINID 568
GPGW G+LLHEA+GHGLEGDFNRKGSSAFS +G+++AS TIVD+GTLA RRGS+++D
Sbjct: 250 GPGWSGVLLHEAVGHGLEGDFNRKGSSAFSGRLGEKVASSLCTIVDDGTLAGRRGSLSVD 309
Query: 569 DEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGK 628
DEG PT+CTTLIENGILKGYMQD +NARLM M++TGN RRES+AH+P+PRMTNTYM G+
Sbjct: 310 DEGTPTECTTLIENGILKGYMQDKLNARLMGMAVTGNGRRESYAHLPMPRMTNTYMRAGE 369
Query: 629 FHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGP 688
P+EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+GP
Sbjct: 370 SDPQEIIASVKKGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGNGP 429
Query: 689 NILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
+ +VSM+GND+ LD GVG CGKDGQ VPVGVGQPTLK+D+ITVGGT
Sbjct: 430 EAMSRVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKLDAITVGGTG 478
>gi|340360995|ref|ZP_08683443.1| U62 family peptidase 2 TldD [Neisseria macacae ATCC 33926]
gi|339889155|gb|EGQ78545.1| U62 family peptidase 2 TldD [Neisseria macacae ATCC 33926]
Length = 498
Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust.
Identities = 264/470 (56%), Positives = 349/470 (74%), Gaps = 3/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LLE L ++L K L + + VDYAD Y Q T E+W LEEGIVK+G+F I+QGVGVR
Sbjct: 30 LLEANHLSPELLAKSLSIIGAHHVDYADIYCQRTAFESWHLEEGIVKSGSFQIDQGVGVR 89
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+SG+KTAF Y+D + +++ + ++ R I + G +K S+++ + I
Sbjct: 90 AVSGEKTAFAYADSLCIDSINRSAQAVRVIG--AAGGEASVKVPSAAYGKSVHAVLNPII 147
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ K+ LL +VE +A+ DPR+++V+A L+ EYD+I I R DG ADIRP+V+L V
Sbjct: 148 GLDSAAKVALLNKVETLAKAADPRIVQVMAGLTCEYDMIYIARLDGRHAADIRPMVRLNV 207
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVL 508
T+I ++ RRE G++G GGRY+ YF + ++ + V ++V ALINLE++PAPAG M VVL
Sbjct: 208 TVIAKQGDRREQGSAGGGGRYDLAYFDETLVRQFVDSAVKQALINLESRPAPAGEMTVVL 267
Query: 509 GPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINID 568
G GWPG+LLHEA+GHGLEGDFNRK +S FS IG+R+A+K +T+VD G +A+RRGS+NID
Sbjct: 268 GNGWPGVLLHEAVGHGLEGDFNRKETSVFSGRIGERVAAKGVTVVDQGDIADRRGSLNID 327
Query: 569 DEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGK 628
DEGN T+ T LIE+GIL GYMQD NARLM TGN RRES+A P+PRMTNT+M NG
Sbjct: 328 DEGNETRRTVLIEDGILVGYMQDETNARLMGTQSTGNGRRESYASAPMPRMTNTFMENGS 387
Query: 629 FHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGP 688
+ P+EII+S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++ GK+ YPVKGAT+IG+GP
Sbjct: 388 YEPDEIIASIDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEGGKLQYPVKGATIIGNGP 447
Query: 689 NILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS-ITVGGTN 737
+LK VSMIGND LD GVGVCGKDGQ VPVGVGQPTL+IDS +TVGG+
Sbjct: 448 EVLKHVSMIGNDTALDSGVGVCGKDGQSVPVGVGQPTLRIDSGLTVGGSE 497
>gi|390435550|ref|ZP_10224088.1| protease TldD [Pantoea agglomerans IG1]
Length = 481
Score = 543 bits (1400), Expect = e-151, Method: Compositional matrix adjust.
Identities = 261/481 (54%), Positives = 349/481 (72%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL ++++ L +LG + + ++DYAD YFQ + +E+W+LE+ I+K G++ I
Sbjct: 3 LNLVSEQLLTANGINQQDLFSLLGQLSERRLDYADLYFQSSFHESWVLEDKIIKDGSYHI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D I+ N L + ++ RSI Q NGK + + SL
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQITLNALRLSSEAARSIVREQGNGKAHTLSAVMN---RSL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y D +SS+ +KI LL RV+K+AR DPRV +V A+L+G Y+ +L+ DG + AD+
Sbjct: 120 YQAIDPLSSLTREDKIALLHRVDKVARAADPRVQEVNASLTGVYEQVLVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L +++ VE G+RE G SG G R Y +F ++ + +V AL+NL
Sbjct: 180 RPLVRLSISVQVEDQGKRERGASGGGARTGYAFFLADEDGEVRADAWAREAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG+++AS T+VD+
Sbjct: 240 AVAAPAGALPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGKIGQQVASDLCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTL RGS+ +DDEG P Q LIENG+LKGYMQD +NARLM +S TGN RRES+AH+P
Sbjct: 300 GTLEGLRGSLAVDDEGVPGQYNMLIENGVLKGYMQDKLNARLMGVSPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P++II SV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+NGKIT
Sbjct: 360 MPRMTNTYMLAGKSSPQDIIESVEYGLYAPNFGGGQVDITSGKFVFSTSEAYLIENGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK+D +T+GG
Sbjct: 420 KPVKGATLIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLDKLTIGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|225023919|ref|ZP_03713111.1| hypothetical protein EIKCOROL_00785 [Eikenella corrodens ATCC
23834]
gi|224943393|gb|EEG24602.1| hypothetical protein EIKCOROL_00785 [Eikenella corrodens ATCC
23834]
Length = 519
Score = 543 bits (1400), Expect = e-151, Method: Compositional matrix adjust.
Identities = 263/487 (54%), Positives = 363/487 (74%), Gaps = 7/487 (1%)
Query: 257 KNIHPLNIARSI----LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEG 312
++ + +N A S LL L + + L + ++VDYAD Y Q T E+W LEEG
Sbjct: 32 QSFNAMNTAHSTVSTQLLHANQLGTDEIARALSAISAHQVDYADIYCQRTAYESWHLEEG 91
Query: 313 IVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSI-ANQSNGKIKIIKN 371
+VK+G+F I+QGVGVRA+SG+KTAF Y+D +S L A ++ R+I A ++K+ +
Sbjct: 92 MVKSGSFQIDQGVGVRAVSGEKTAFAYADSLSPAVLRQAAEAVRTIGATGQERQVKLAGS 151
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ ++ +LY+ + I ++ K+ LL RVE++A+ DPR+++V+A L+ E+D+I + R
Sbjct: 152 ASRQQV-ALYTPDNPIPGLDSAAKVALLNRVEQLAKAADPRIVQVMAGLTCEHDLIYLAR 210
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
DG+ ADIRPLV+L +T++ ++ RRE+G+ G GGR+ +YF++ L V +V AL
Sbjct: 211 LDGITAADIRPLVRLSITVVAKQGERREVGSFGGGGRHGLDYFSEERLRSYVEAAVKQAL 270
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
+NLE++PAPAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+SAF+ +G+R+A+K +T
Sbjct: 271 VNLESRPAPAGSMTVVLGSGWPGVLLHEAVGHGLEGDFNRKGTSAFAGRLGERVAAKGVT 330
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD G + RRGS+N+DDEGN T+ T LIE+GIL GY+QD NARLM M++TGN RRES+
Sbjct: 331 VVDQGNIELRRGSLNLDDEGNATRQTVLIEDGILAGYLQDETNARLMGMAVTGNGRRESY 390
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A P+PRMTNT+M NG PEEII+S++ GLYA NF GGQVDIT+GKFVFSAS+A+ ++N
Sbjct: 391 AAAPMPRMTNTFMQNGNREPEEIIASIEKGLYAVNFGGGQVDITSGKFVFSASEAWWVEN 450
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS- 730
GK+ YPVKGAT+IG GP +LK VSMIGNDM LD G+GVCGK+GQ VPVGVGQPTL+ID+
Sbjct: 451 GKLQYPVKGATIIGSGPEVLKHVSMIGNDMALDSGIGVCGKEGQSVPVGVGQPTLRIDAG 510
Query: 731 ITVGGTN 737
+TVGG+
Sbjct: 511 LTVGGSE 517
>gi|407892790|ref|ZP_11151820.1| microcin-processing peptidase 2 [Diplorickettsia massiliensis 20B]
Length = 464
Score = 543 bits (1400), Expect = e-151, Method: Compositional matrix adjust.
Identities = 261/459 (56%), Positives = 342/459 (74%), Gaps = 4/459 (0%)
Query: 280 LLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFY 339
+ +L + VD AD YFQ ++E+W LE+G++K+GNF I++GVGVR +SG+KT F Y
Sbjct: 1 MQALLARLQAPGVDMADLYFQSVQSESWSLEDGLIKSGNFDIDRGVGVRVVSGEKTGFAY 60
Query: 340 SDDISKNTLINAVKSTRSIANQSN-GKIKIIKNIKKIKINSLYSFTDTISSINIREKIKL 398
SDD+ L +A SIA G+I+ + + + LY+ D I S++ ++K+ L
Sbjct: 61 SDDLIFPALESAATVAASIARSGQQGQIQAWQKTQPVP--PLYTTADPILSLSEQDKLDL 118
Query: 399 LERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRR 458
L +V+K AR DPR+ +V +LSG +++LI ++GLI AD+RPL++L V +I E+ G R
Sbjct: 119 LHQVDKRARAADPRIQQVSVSLSGVREIVLILNSEGLIAADVRPLIRLNVQVIAEEKGSR 178
Query: 459 EIGNSGCGGRYNYNYFTDMILEKCVSN-SVNSALINLEAKPAPAGIMKVVLGPGWPGILL 517
E G +G GGR +Y YF + ++ +V A+ L A PAPAG M VVLGPGWPG+LL
Sbjct: 179 EQGFAGGGGRTDYRYFLQGDVAGLLAEEAVRQAVTQLSAIPAPAGAMPVVLGPGWPGVLL 238
Query: 518 HEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCT 577
HEA+GHGLEGDFNRKGSSAFS+ +G+R+AS T+VD+GTL +RRGS+ IDDEG PTQ T
Sbjct: 239 HEAVGHGLEGDFNRKGSSAFSHRLGERVASPGCTVVDDGTLPHRRGSLTIDDEGTPTQRT 298
Query: 578 TLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISS 637
LIE GILKGYMQD +NARLM TGN RRES+A++P+PRMTNTY+L G + PEEII+S
Sbjct: 299 VLIEKGILKGYMQDKLNARLMGTQSTGNGRRESYAYLPMPRMTNTYLLPGPYAPEEIIAS 358
Query: 638 VKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMI 697
V GLYA NFSGGQVDIT+GKFVFSA +AY+I+ GK+T PVKGATLIG+GP +L +VSM+
Sbjct: 359 VDRGLYAVNFSGGQVDITSGKFVFSACEAYLIEKGKVTQPVKGATLIGNGPEVLTRVSML 418
Query: 698 GNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
G+D+KLD G+G CGK+GQ VPVGVGQPTLKID +TVGGT
Sbjct: 419 GHDLKLDSGIGSCGKEGQSVPVGVGQPTLKIDCLTVGGT 457
>gi|419797224|ref|ZP_14322719.1| TldD/PmbA family protein [Neisseria sicca VK64]
gi|385698548|gb|EIG28903.1| TldD/PmbA family protein [Neisseria sicca VK64]
Length = 498
Score = 543 bits (1400), Expect = e-151, Method: Compositional matrix adjust.
Identities = 264/470 (56%), Positives = 349/470 (74%), Gaps = 3/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LLE L ++L K L + + VDYAD Y Q T E+W LEEGIVK+G+F I+QGVGVR
Sbjct: 30 LLEANHLSPELLAKSLSIIGAHHVDYADIYCQRTAFESWHLEEGIVKSGSFQIDQGVGVR 89
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+SG+KTAF Y+D + +++ + ++ R I + G +K S+++ + I
Sbjct: 90 AVSGEKTAFAYADSLCIDSINRSAQAVRVIG--AAGGEASVKVPSAAYGKSVHAVLNPII 147
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ K+ LL +VE +A+ DPR+++V+A L+ EYD+I I R DG ADIRP+V+L V
Sbjct: 148 GLDSAAKVALLNKVETLAKAADPRIVQVMAGLTCEYDMIYIARLDGRHAADIRPMVRLNV 207
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVL 508
T+I ++ RRE G++G GGRY+ YF + ++ + V ++V ALINLE++PAPAG M VVL
Sbjct: 208 TVIAKQGDRREQGSAGGGGRYDLAYFDETLVRQFVDSAVKQALINLESRPAPAGEMTVVL 267
Query: 509 GPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINID 568
G GWPG+LLHEA+GHGLEGDFNRK +S FS IG+R+A+K +T+VD G +A+RRGS+NID
Sbjct: 268 GNGWPGVLLHEAVGHGLEGDFNRKETSVFSGRIGERVATKGVTVVDQGDIADRRGSLNID 327
Query: 569 DEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGK 628
DEGN T+ T LIE+GIL GYMQD NARLM TGN RRES+A P+PRMTNT+M NG
Sbjct: 328 DEGNETRRTVLIEDGILVGYMQDETNARLMGTQSTGNGRRESYASAPMPRMTNTFMENGS 387
Query: 629 FHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGP 688
+ P+EII+S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++ GK+ YPVKGAT+IG+GP
Sbjct: 388 YEPDEIIASIDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEGGKLQYPVKGATIIGNGP 447
Query: 689 NILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS-ITVGGTN 737
+LK VSMIGND LD GVGVCGKDGQ VPVGVGQPTL+IDS +TVGG+
Sbjct: 448 EVLKHVSMIGNDTALDSGVGVCGKDGQSVPVGVGQPTLRIDSGLTVGGSE 497
>gi|37527911|ref|NP_931256.1| protease TldD [Photorhabdus luminescens subsp. laumondii TTO1]
gi|36787347|emb|CAE16436.1| TldD protein, suppresses the inhibitory activity of the carbon
storage regulator (CSRA) [Photorhabdus luminescens
subsp. laumondii TTO1]
Length = 481
Score = 543 bits (1399), Expect = e-151, Method: Compositional matrix adjust.
Identities = 272/474 (57%), Positives = 357/474 (75%), Gaps = 9/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL L + L +LG + + ++DYAD YFQ + +E+W+LE+ I+K G+++I+QGVGVR
Sbjct: 10 LLAANKLSHQDLFSVLGQLAERRLDYADLYFQSSYHESWVLEDRIIKDGSYNIDQGVGVR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSLYSFTDTI 387
AISG+KT F Y+D I+ N L + ++ RSI ++ NGK+ ++ + LY+ D +
Sbjct: 70 AISGEKTGFAYADQITLNALQQSAQAARSIVHENGNGKVH---TFGEVTYSQLYAAIDPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S + EKI LL+RV+++AR +DPRV +V A+L+G Y+ +L+ DG + ADIRPLV+L
Sbjct: 127 QSFSREEKIALLQRVDQVARAEDPRVQEVNASLTGIYERVLVAATDGTLAADIRPLVRLS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLEAKPAPAG 502
VT++VE NG+RE G SG GGRY Y YF ++ E+ +V AL+NL A APAG
Sbjct: 187 VTVLVEDNGKREHGTSGGGGRYGYEYFLEVASGQIRAEQFAREAVRMALVNLSAVAAPAG 246
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG+++AS+ T+VD+ T+ RR
Sbjct: 247 TMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQIGEKVASELCTVVDDATIKGRR 306
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+ IDDEG P Q LIENGILKGYMQD MNARLM ++ TGN RRES+AH+P+PRMTNT
Sbjct: 307 GSLAIDDEGVPGQYNVLIENGILKGYMQDKMNARLMGVAPTGNGRRESYAHLPMPRMTNT 366
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
Y+L G PEEIISSV+NGLYA NF GGQVDIT+GKFVFS S+AY+I+NGKIT PVKGAT
Sbjct: 367 YLLAGHSTPEEIISSVENGLYAPNFGGGQVDITSGKFVFSTSEAYLIENGKITKPVKGAT 426
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
LIG G ++++SM+GND+ LD GVGVCGK+GQ VPVGVGQPTLK+D++TVGGT
Sbjct: 427 LIGSGIEAMQQISMVGNDLDLDKGVGVCGKEGQSVPVGVGQPTLKLDNLTVGGT 480
>gi|293394186|ref|ZP_06638486.1| U62 family peptidase 2 TldD [Serratia odorifera DSM 4582]
gi|291423164|gb|EFE96393.1| U62 family peptidase 2 TldD [Serratia odorifera DSM 4582]
Length = 481
Score = 543 bits (1399), Expect = e-151, Method: Compositional matrix adjust.
Identities = 264/481 (54%), Positives = 358/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L + LL L + L +LG + + ++DYAD YFQ + +E W++E+GI+K G+++I
Sbjct: 3 LTLVSEHLLAANKLSHQDLFAVLGQLAERRIDYADLYFQSSYHEAWVIEDGIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D I+ N L + ++ RSI Q +GK + + I ++
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQITLNALQQSAQAARSIVREQGDGKARTLGEISH---PAM 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
YS D + S+ EKI LL RV+K+AR D RV +V A+++G Y+ +L+ DG + AD+
Sbjct: 120 YSLLDPLQSLPREEKIALLHRVDKVARAADKRVQEVSASITGVYEQVLVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLE 495
RPLV+L V+++VE++G+RE G+SG GGR+ Y+YF +++ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEEDGKRERGSSGGGGRFGYDYFLEVVGGETRADAFAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AIAAPAGGMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGQLVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTL RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTLQGRRGSLAIDDEGVPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK PEEI++SV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+NG+IT
Sbjct: 360 MPRMTNTYMLAGKSTPEEIVASVEYGLYAPNFGGGQVDITSGKFVFSTSEAYLIENGRIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KPVKGATLIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|289209147|ref|YP_003461213.1| peptidase U62 modulator of DNA gyrase [Thioalkalivibrio sp. K90mix]
gi|288944778|gb|ADC72477.1| peptidase U62 modulator of DNA gyrase [Thioalkalivibrio sp. K90mix]
Length = 480
Score = 543 bits (1399), Expect = e-151, Method: Compositional matrix adjust.
Identities = 265/481 (55%), Positives = 351/481 (72%), Gaps = 12/481 (2%)
Query: 263 NIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSIN 322
++A+ LL+P L + L +LG F VD D YFQF E W LE+GIVK+ +F+I
Sbjct: 4 SLAQQTLLDPAGLGDHELTTLLGTTFGRGVDGGDCYFQFACQEGWSLEDGIVKSASFNIE 63
Query: 323 QGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLY 381
+GVG+R + G++T F YSDDI+ L++A ++ RSIA+ +G++ + + +LY
Sbjct: 64 RGVGIRVVRGEQTGFAYSDDIAMPALLDAARTARSIADAGQSGRVAVASRMPTRP--ALY 121
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + S++ + KI LL+ V+ AR DPRV +V+ +L+G ++V+L+ G + D+R
Sbjct: 122 APENPMDSLDEQSKIDLLKEVDAAARAADPRVTQVMCSLAGVHEVVLVLNARGELTTDVR 181
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEK-----CVSNSVNSALINLEA 496
PLV+L V +I ++ RRE G S + LE +V AL+NLEA
Sbjct: 182 PLVRLSVQVIAQQGDRRESGTS----GGGGRFGYRYFLENDRAAGYAREAVRQALVNLEA 237
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
+ APAG MKVVLGPGWPG+LLHEAIGHGLEGDFNRKG+SAFS IG+R+A+K ITIVD+G
Sbjct: 238 RDAPAGTMKVVLGPGWPGVLLHEAIGHGLEGDFNRKGTSAFSGRIGERVAAKGITIVDDG 297
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL RRGS+N+DDEG TQ T LIE+GIL+GYMQD MNARL + TGN RRES+AH+P+
Sbjct: 298 TLEGRRGSLNVDDEGTATQQTVLIEDGILRGYMQDEMNARLTGVQSTGNGRRESYAHLPM 357
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ PEEI++SV++GLYA NF GGQVDIT+GKFVFSAS+AY ++ GK+TY
Sbjct: 358 PRMTNTYMLAGEADPEEILASVEDGLYAVNFGGGQVDITSGKFVFSASEAYRVEKGKVTY 417
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG+GP++L +VSM+GNDM+LDPGVG CGK+GQ VPVGVGQPTL+ID +TVGGT
Sbjct: 418 PVKGATLIGNGPDVLTRVSMVGNDMRLDPGVGTCGKEGQGVPVGVGQPTLRIDGMTVGGT 477
Query: 737 N 737
Sbjct: 478 Q 478
>gi|241758975|ref|ZP_04757087.1| TldD protein [Neisseria flavescens SK114]
gi|241320796|gb|EER57029.1| TldD protein [Neisseria flavescens SK114]
Length = 480
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 263/469 (56%), Positives = 347/469 (73%), Gaps = 3/469 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LLE L +L + L + N VDYAD Y Q T E+W LEEGIVK+G+F I+QGVGVR
Sbjct: 12 LLEANHLSPDLLAQSLSIIGANHVDYADIYCQRTAYESWHLEEGIVKSGSFQIDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+SGDKTAF Y+D + +++ + K+ R I + G +K ++ D I+
Sbjct: 72 AVSGDKTAFAYADSLCIDSINRSAKAVRVIG--AAGGEASVKVPTPAYGKPVHMAIDPIA 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
S++ K+ LL +VE +A+ DPR+++V+A L+ EYD++ I R DG ADIRP+V++ V
Sbjct: 130 SLDSAAKVALLNKVETLAKAADPRIVQVMAGLTCEYDMVYIARLDGKHAADIRPMVRMNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVL 508
T+I ++ RRE G++G GGRY+ YF + ++ + V ++V AL NLE++PAPAG M VVL
Sbjct: 190 TVIAKQGERREQGSAGGGGRYDLAYFDENLVHRFVDSAVKQALTNLESRPAPAGEMTVVL 249
Query: 509 GPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINID 568
G GWPG+LLHEA+GHGLEGDFNRK +S FS IG+R+A+K +T+VD G +A+RRGS+NID
Sbjct: 250 GNGWPGVLLHEAVGHGLEGDFNRKETSVFSGRIGERVAAKGVTVVDQGDIADRRGSLNID 309
Query: 569 DEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGK 628
DEGN T+ T LIE+GIL GYMQD NARLM TGN RRES+A P+PRMTNT+M NG
Sbjct: 310 DEGNETRRTVLIEDGILVGYMQDETNARLMGTQSTGNGRRESYASAPMPRMTNTFMENGG 369
Query: 629 FHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGP 688
+ PEEII+S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++ GK+ YPVKGAT+IG+GP
Sbjct: 370 YEPEEIIASIDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEGGKLQYPVKGATIIGNGP 429
Query: 689 NILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS-ITVGGT 736
+LK VSMIGND LD GVGVCGK+GQ VPVGVGQPTL+ID+ +TVGG+
Sbjct: 430 EVLKHVSMIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAGLTVGGS 478
>gi|359397063|ref|ZP_09190113.1| Protein tldD-like protein [Halomonas boliviensis LC1]
gi|357968857|gb|EHJ91306.1| Protein tldD-like protein [Halomonas boliviensis LC1]
Length = 468
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 255/469 (54%), Positives = 347/469 (73%), Gaps = 3/469 (0%)
Query: 270 LEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRA 329
+ P LD L LG +DYAD YFQ T E W+LE+G VK +++I+ GVGVR+
Sbjct: 1 MTPGGLDLDALETGLGYAMGAGIDYADLYFQRTWQEGWVLEDGEVKEASYNIDGGVGVRS 60
Query: 330 ISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISS 389
++G+KT F YS+ I+ + L++ ++ I +G+ + ++ + S Y+ D ++
Sbjct: 61 LAGEKTGFAYSNQITADALMDTGRTAAGIVR--SGQRLSGQLVQPVSATSRYAGIDPLAG 118
Query: 390 INIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVT 449
++ +K+ +L++ +++AR DP + +V A+LSG Y+V+L+ +DG + ADIRPLV+ V+
Sbjct: 119 LSAEDKVAMLKQADRVARAADPSISQVSASLSGTYEVVLVRASDGTLAADIRPLVRFNVS 178
Query: 450 IIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKVVL 508
+I KNGRRE G++G GGRY+ D + E+ +V AL+NLEA APAG M VVL
Sbjct: 179 VIAVKNGRRERGSAGGGGRYSMAKLRDDQVAEQYAKEAVRQALVNLEAIDAPAGQMPVVL 238
Query: 509 GPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINID 568
GWPGILLHEA+GHGLEGDFNRKGSSAF+ +G+R+A+K +TIVD+ TLA+ RGS+++D
Sbjct: 239 ASGWPGILLHEAVGHGLEGDFNRKGSSAFAGKMGERVAAKGVTIVDDATLADCRGSMSVD 298
Query: 569 DEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGK 628
DEG P Q T LIE+GIL GYMQD +NARLM M+ TGNARRESFAH+P+PRMTNT ML G+
Sbjct: 299 DEGTPGQYTPLIEDGILTGYMQDKLNARLMGMAPTGNARRESFAHLPMPRMTNTVMLAGQ 358
Query: 629 FHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGP 688
P +II SVK G+YA +F GGQVDIT+GKFVFSAS+AY+I++GK+T PVKGATLIG+GP
Sbjct: 359 EEPSDIIKSVKRGIYAVSFGGGQVDITSGKFVFSASEAYLIEDGKVTAPVKGATLIGNGP 418
Query: 689 NILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
+++VSMIG+DM LD G+GVCGK+GQ VPVGVGQPTLK+D +TVGGT
Sbjct: 419 EAMQRVSMIGHDMALDTGIGVCGKEGQGVPVGVGQPTLKLDELTVGGTQ 467
>gi|288576100|ref|ZP_06394167.1| TldD protein [Neisseria mucosa ATCC 25996]
gi|288566237|gb|EFC87797.1| TldD protein [Neisseria mucosa ATCC 25996]
Length = 498
Score = 542 bits (1397), Expect = e-151, Method: Compositional matrix adjust.
Identities = 264/471 (56%), Positives = 354/471 (75%), Gaps = 5/471 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LLE L ++L K L + + VDYAD Y Q T E+W LEEGIVK+G+F I+QGVGVR
Sbjct: 30 LLEANHLSPELLAKSLSIIGAHHVDYADIYCQRTAFESWHLEEGIVKSGSFQIDQGVGVR 89
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKI-IKNIKKIKINSLYSFTDTI 387
A+SG+KTAF Y+D + +++ + ++ R I S G++ + + ++ K S+++ + I
Sbjct: 90 AVSGEKTAFAYADSLCIDSINRSAQAVRVIG-ASGGEVSVKVPSVAHGK--SVHATLNPI 146
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
++ K+ LL +VE +A+ DPR+++V+A L+ EYD+I I R DG ADIRP+V+L
Sbjct: 147 IGLDSAAKVALLNKVEMLAKAADPRIVQVMAGLTCEYDMIYIARLDGRHAADIRPMVRLN 206
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
VT+I ++ RRE G++G GGRY+ YF + ++ + V ++V ALINLE++PAPAG M VV
Sbjct: 207 VTVIAKQGERREQGSAGGGGRYDLAYFDETLVRQFVDSAVKQALINLESRPAPAGEMTVV 266
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LG GWPG+LLHEA+GHGLEGDFNRK +S FS IG+R+A+K +T+VD G +A+RRGS+NI
Sbjct: 267 LGNGWPGVLLHEAVGHGLEGDFNRKETSVFSGRIGERVAAKGVTVVDQGDIADRRGSLNI 326
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEGN T+ T LIE+GIL GYMQD NARLM TGN RRES+A P+PRMTNT+M NG
Sbjct: 327 DDEGNETRRTVLIEDGILVGYMQDETNARLMGTQSTGNGRRESYASAPMPRMTNTFMENG 386
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ P+EII+S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++ GK+ YPVKGAT+IG+G
Sbjct: 387 GYEPDEIIASIDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEGGKLQYPVKGATIIGNG 446
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS-ITVGGTN 737
P +LK VSMIGND LD GVGVCGKDGQ VPVGVGQPTL+ID+ +TVGG+
Sbjct: 447 PEVLKHVSMIGNDTALDSGVGVCGKDGQSVPVGVGQPTLRIDAGLTVGGSE 497
>gi|333982461|ref|YP_004511671.1| peptidase U62 [Methylomonas methanica MC09]
gi|333806502|gb|AEF99171.1| peptidase U62 modulator of DNA gyrase [Methylomonas methanica MC09]
Length = 479
Score = 542 bits (1397), Expect = e-151, Method: Compositional matrix adjust.
Identities = 271/474 (57%), Positives = 346/474 (72%), Gaps = 11/474 (2%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
+L P L + + +++ + VD AD YFQ + E+W LE GIVK G+ SI G GVR
Sbjct: 11 ILAPNSLLSQDIDRVMSTLLSAPVDAADIYFQSSHFESWSLEGGIVKEGSHSIEHGAGVR 70
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQ---SNGKIKIIKNIKKIKINSLYSFTD 385
+SGDKT F YSD I L+ A + ++I Q + +I+ +N + LY +
Sbjct: 71 VVSGDKTGFAYSDRIELPILLEAANNVKAIVRQGQHAQHRIQTAQNWPQ-----LYRPLN 125
Query: 386 TISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQ 445
+SS+ ++KI LL+RV+ R D R+ +V+ +L YD +L+ DG + AD+RPLV+
Sbjct: 126 PLSSLADQDKIDLLKRVDAETRKLDSRIEEVMVSLVAAYDNVLVANQDGSLQADVRPLVR 185
Query: 446 LFVTIIVEKNGRREIGNSGCGGRYNYNYF--TDMILEKCVSNSVNSALINLEAKPAPAGI 503
+ V++I+ +NGRRE G+ G GGR +Y YF D ++ +V A INL+A+ APAG
Sbjct: 186 MNVSVIMSENGRREQGSMGGGGRSDYGYFLEGDRAMD-FAREAVRQAQINLQAEDAPAGN 244
Query: 504 MKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRG 563
M VVLGPGWPGILLHEAIGHGLEGDFNRKG+SAFS +G+R+AS T+VD+GTL RRG
Sbjct: 245 MPVVLGPGWPGILLHEAIGHGLEGDFNRKGTSAFSGRVGERVASDLCTVVDDGTLPGRRG 304
Query: 564 SINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTY 623
S++IDDEG PT+ T LIENGILKGYMQD +NARLM + TGN RRES+AH+P+PRMTNTY
Sbjct: 305 SLSIDDEGTPTENTVLIENGILKGYMQDKLNARLMGVKPTGNGRRESYAHLPMPRMTNTY 364
Query: 624 MLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATL 683
ML G+ PEEII SVK GLYA NF GGQVDIT+GKFVFSAS+AY+I+NGKIT PVKGATL
Sbjct: 365 MLPGQSDPEEIIRSVKKGLYARNFGGGQVDITSGKFVFSASEAYLIENGKITRPVKGATL 424
Query: 684 IGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
IG+GP++L KVSM+GNDM+LD GVG CGK+GQ VPVGVGQPTLKID +TVGGT+
Sbjct: 425 IGNGPDVLTKVSMVGNDMQLDSGVGTCGKEGQSVPVGVGQPTLKIDGMTVGGTS 478
>gi|390952290|ref|YP_006416049.1| microcin-processing peptidase 2 [Thiocystis violascens DSM 198]
gi|390428859|gb|AFL75924.1| microcin-processing peptidase 2 [Thiocystis violascens DSM 198]
Length = 483
Score = 542 bits (1397), Expect = e-151, Method: Compositional matrix adjust.
Identities = 273/479 (56%), Positives = 354/479 (73%), Gaps = 5/479 (1%)
Query: 261 PLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFS 320
P+ IAR +L P L E L ++LG + + VD AD YFQ ++ ++W+LE+ I+K GNFS
Sbjct: 4 PIAIARDSILAPAGLVEHDLDRLLGRLTSSCVDAADIYFQSSRLQSWVLEDSIIKDGNFS 63
Query: 321 INQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSL 380
I QG G+RA+SG+KT F YS+++ L A ++ R+IA G+ +K + L
Sbjct: 64 IEQGAGLRAVSGEKTGFAYSNELQFPALAQAAEAARAIAR--GGQEAQVKVGHALAERRL 121
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ + I S+ EK+ LL RV++ AR DPRV +V A+L D +L+ +DG + ADI
Sbjct: 122 YAPINPIESLADPEKVALLHRVDEEARRLDPRVREVTASLVAAQDTVLVLADDGSLAADI 181
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF--TDMILEKCVSNSVNSALINLEAKP 498
RPL+++ V +IVE++GRRE G+SG G R + YF D L +V AL NL+A+
Sbjct: 182 RPLIRMSVNVIVEQDGRREQGSSGGGARTDLGYFLAEDRAL-GYAREAVRLALTNLDAED 240
Query: 499 APAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL 558
APAG M VVLG GWPG+LLHEAIGHGLEGDFNRKGSSAF+ IG+R+A+ +T+VDNGTL
Sbjct: 241 APAGTMTVVLGAGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRIGERVAAPGVTVVDNGTL 300
Query: 559 ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPR 618
A RRGS+N+DDEG TQ T LIE+GIL+ YMQD +NARL + TGN RRES+AH+P+PR
Sbjct: 301 AGRRGSLNMDDEGTITQNTVLIEDGILRCYMQDKLNARLTGSAPTGNGRRESYAHLPMPR 360
Query: 619 MTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPV 678
MTNTYML G+ P EII+SVK GLYA NF GGQVDIT+GKFVFSAS+AY+I+NGKI PV
Sbjct: 361 MTNTYMLAGQHDPAEIIASVKKGLYAVNFGGGQVDITSGKFVFSASEAYLIENGKIGRPV 420
Query: 679 KGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
KGATLIG+GP++L +VSMIGND+KLD GVG CGK+GQ VPVGVGQPTL++D++TVGGT+
Sbjct: 421 KGATLIGNGPDVLTRVSMIGNDLKLDEGVGTCGKEGQSVPVGVGQPTLRVDALTVGGTS 479
>gi|148546223|ref|YP_001266325.1| C69 family peptidase [Pseudomonas putida F1]
gi|395447390|ref|YP_006387643.1| peptidase U62, modulator of DNA gyrase [Pseudomonas putida ND6]
gi|397697811|ref|YP_006535694.1| peptidase U62, modulator of DNA gyrase [Pseudomonas putida DOT-T1E]
gi|421524402|ref|ZP_15971025.1| C69 family peptidase [Pseudomonas putida LS46]
gi|148510281|gb|ABQ77141.1| microcin-processing peptidase 2, Unknown type peptidase, MEROPS
family U62 [Pseudomonas putida F1]
gi|388561387|gb|AFK70528.1| peptidase U62, modulator of DNA gyrase [Pseudomonas putida ND6]
gi|397334541|gb|AFO50900.1| peptidase U62, modulator of DNA gyrase [Pseudomonas putida DOT-T1E]
gi|402751831|gb|EJX12342.1| C69 family peptidase [Pseudomonas putida LS46]
Length = 479
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 265/469 (56%), Positives = 350/469 (74%), Gaps = 2/469 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L L +LG + +D AD YFQ +E W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGLTLDSLQSVLGELAGPGIDAADLYFQGQISETWALEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ L +A ++ RSI+ G+ ++ + ++ +LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAINLEALTSAARAARSISRA--GQNGTVQAFRSQEVAALYTADNPLD 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ EK++LL+RV+ R DPR+ +V +++G ++ ILI DG + AD+RPLV+ V
Sbjct: 130 VLSRAEKVELLKRVDAATRALDPRIQQVSVSMAGVWERILIAAADGSLAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVL 508
++IVE+NGRRE G G GGR +Y YFT+ + ++ AL+NLEA PAPAG + VVL
Sbjct: 190 SVIVEQNGRRERGGQGGGGRTDYRYFTEERVMGYAREALRQALVNLEAIPAPAGTLPVVL 249
Query: 509 GPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINID 568
G GW G+LLHEA+GHGLEGDFNRKGSSAFS IG+++AS TIVD+GTL RRGS+++D
Sbjct: 250 GSGWSGVLLHEAVGHGLEGDFNRKGSSAFSGRIGEKVASSLCTIVDDGTLEGRRGSLSVD 309
Query: 569 DEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGK 628
DEG PT+CTTLIENG+LKGYMQD +NARLM M++TGN RRES+AH+P+PRMTNTYM G+
Sbjct: 310 DEGTPTECTTLIENGVLKGYMQDKLNARLMGMAVTGNGRRESYAHLPMPRMTNTYMRAGE 369
Query: 629 FHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGP 688
P+EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+GP
Sbjct: 370 SDPQEIIASVKKGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGNGP 429
Query: 689 NILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
+ +VSM+GND+ LD GVG CGKDGQ VPVGVGQPTLK+D+ITVGGT
Sbjct: 430 EAMSRVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKLDAITVGGTG 478
>gi|440232714|ref|YP_007346507.1| putative Zn-dependent protease-like protein [Serratia marcescens
FGI94]
gi|440054419|gb|AGB84322.1| putative Zn-dependent protease-like protein [Serratia marcescens
FGI94]
Length = 481
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 264/481 (54%), Positives = 356/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L + LL L + L +LG + + ++DYAD YFQ + +E W++E+GI+K G+++I
Sbjct: 3 LTLVSEQLLTANKLSHQDLHTVLGQLAERRLDYADLYFQSSYHEAWVIEDGIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D I+ N L + ++ RSI Q +G+ + I+ +L
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQITLNALNQSAQAARSIVREQGDGRAHTLGEIRH---QAL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y D + S+ EKI LL RV+K+AR DPRV +V A+++G Y+ +L+ DG + AD+
Sbjct: 120 YLLLDPLQSLPREEKIALLHRVDKVARAADPRVQEVTASVTGVYEQVLVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLE 495
RPLV+L V+++VE++G+RE G+SG GGR+ Y+YF + I + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEEDGKRERGSSGGGGRFGYDYFLETIDGEVRADAFAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+GSS FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGGMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGSSVFSGQMGQLVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ RRGS+ IDDEG P Q LIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTMQGRRGSLAIDDEGVPGQYNVLIENGVLKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G+ PEEII+SV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+ G+IT
Sbjct: 360 MPRMTNTYMLAGQSTPEEIIASVEYGLYAPNFGGGQVDITSGKFVFSTSEAYLIEKGRIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+ LD GVGVCGK+GQ VPVGVGQPTLK+D++TVGG
Sbjct: 420 KPVKGATLIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSVPVGVGQPTLKLDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|261819623|ref|YP_003257729.1| protease TldD [Pectobacterium wasabiae WPP163]
gi|261603636|gb|ACX86122.1| peptidase U62 modulator of DNA gyrase [Pectobacterium wasabiae
WPP163]
gi|385869890|gb|AFI88410.1| TldD protein [Pectobacterium sp. SCC3193]
Length = 481
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 257/470 (54%), Positives = 351/470 (74%), Gaps = 11/470 (2%)
Query: 273 FDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISG 332
+LD+ L +LG++ + ++DYAD YFQ + +E+W+LE+ I+K G+++I+QGVG+RAI G
Sbjct: 16 LNLDD--LAAVLGSLNERRLDYADLYFQSSYHESWVLEDRIIKDGSYNIDQGVGIRAIDG 73
Query: 333 DKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSLYSFTDTISSIN 391
+KT F Y+D I+ N L + ++ RSI Q GK++ + + +LY + + S+
Sbjct: 74 EKTGFAYADQITLNALHQSAQAARSIVREQGAGKVRTLGEVSH---RALYPTLNPLDSLT 130
Query: 392 IREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTII 451
+KI LL+R + +AR D RV +V A+L+G Y+++L+ DG + AD+RPLV+L ++++
Sbjct: 131 REDKIALLQRADTVARAADTRVQEVSASLTGVYELVLVAATDGTLAADVRPLVRLSISVL 190
Query: 452 VEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLEAKPAPAGIMKV 506
VE G+RE G SG G R +Y YF ++ ++ +V AL+NL A APAG M V
Sbjct: 191 VEAEGKRERGASGGGTRGDYAYFWEVTDGEPRVDAWAKEAVRMALVNLSAVAAPAGPMPV 250
Query: 507 VLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSIN 566
VLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +GK +AS+ T+VD+GTL+ RRGSI+
Sbjct: 251 VLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGKLVASELCTVVDDGTLSGRRGSIS 310
Query: 567 IDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLN 626
+DDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML
Sbjct: 311 MDDEGVPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNTYMLA 370
Query: 627 GKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGH 686
GK PEEIISSV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+ G+IT PVKGATLIG
Sbjct: 371 GKSTPEEIISSVEYGLYAPNFGGGQVDITSGKFVFSTSEAYLIEKGRITTPVKGATLIGS 430
Query: 687 GPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK++S+TVGGT
Sbjct: 431 GIEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLESLTVGGT 480
>gi|386010603|ref|YP_005928880.1| Peptidase U62, modulator of DNA gyrase [Pseudomonas putida BIRD-1]
gi|313497309|gb|ADR58675.1| Peptidase U62, modulator of DNA gyrase [Pseudomonas putida BIRD-1]
Length = 479
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 265/469 (56%), Positives = 350/469 (74%), Gaps = 2/469 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L L +LG + +D AD YFQ +E W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGLTLDSLQSVLGELAGPGIDAADLYFQGQISETWALEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ L +A ++ RSI+ G+ ++ + ++ +LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAINLEALTSAARAARSISRA--GQNGTVQAFRSQEVAALYTADNPLD 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ EK++LL+RV+ R DPR+ +V +++G ++ ILI DG + AD+RPLV+ V
Sbjct: 130 VLSRAEKVELLKRVDAATRALDPRIQQVSVSMAGVWERILIAAADGSLAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVL 508
++IVE+NGRRE G G GGR +Y YFT+ + ++ AL+NLEA PAPAG + VVL
Sbjct: 190 SVIVEQNGRRERGGQGGGGRTDYRYFTEERVVGYAREALRQALVNLEAIPAPAGTLPVVL 249
Query: 509 GPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINID 568
G GW G+LLHEA+GHGLEGDFNRKGSSAFS IG+++AS TIVD+GTL RRGS+++D
Sbjct: 250 GSGWSGVLLHEAVGHGLEGDFNRKGSSAFSGRIGEKVASSLCTIVDDGTLEGRRGSLSVD 309
Query: 569 DEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGK 628
DEG PT+CTTLIENG+LKGYMQD +NARLM M++TGN RRES+AH+P+PRMTNTYM G+
Sbjct: 310 DEGTPTECTTLIENGVLKGYMQDKLNARLMGMAVTGNGRRESYAHLPMPRMTNTYMRAGE 369
Query: 629 FHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGP 688
P+EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+GP
Sbjct: 370 SDPQEIIASVKKGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGNGP 429
Query: 689 NILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
+ +VSM+GND+ LD GVG CGKDGQ VPVGVGQPTLK+D+ITVGGT
Sbjct: 430 EAMSRVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKLDAITVGGTG 478
>gi|325265727|ref|ZP_08132416.1| U62 family peptidase 2 TldD [Kingella denitrificans ATCC 33394]
gi|324982858|gb|EGC18481.1| U62 family peptidase 2 TldD [Kingella denitrificans ATCC 33394]
Length = 480
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 256/472 (54%), Positives = 353/472 (74%), Gaps = 7/472 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL L + L K L + + VDYAD Y Q T E+W L+EG+VK+G+F I+QGVGVR
Sbjct: 12 LLHANGLSAEELAKPLALIGTHHVDYADIYCQRTAYESWHLDEGMVKSGSFQIDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGK-IKI-IKNIKKIKINSLYSFTDT 386
A+SG+KTA Y+D ++ + ++ A ++ + I N +++ + K ++Y+ +
Sbjct: 72 AVSGEKTALAYADSLTADAVLQAAQAVKVIGAAGNHTPVRVPVPTFGK----TVYAGCNP 127
Query: 387 ISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQL 446
I+++ +K+ LL++VE++A+ DPR+++V+A L+ E+D++ I R DG ADIRPLV++
Sbjct: 128 IATLPSPDKVALLQKVEQLAKAADPRIVQVMAGLTCEHDMVYIARMDGRHAADIRPLVRV 187
Query: 447 FVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKV 506
+T+I ++ RRE G+SG GGR++ YFT+ L++ V+++V AL NLEA+PAPAG MKV
Sbjct: 188 SITVIAKQGERREQGSSGGGGRFDLGYFTEAKLQEYVNHAVQQALTNLEARPAPAGAMKV 247
Query: 507 VLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSIN 566
VLG GWPG+LLHEA+GHGLEGDFNRK +S FS IG+R+A+K +T++D G + NRRGS+N
Sbjct: 248 VLGSGWPGVLLHEAVGHGLEGDFNRKQTSVFSGRIGERVAAKGVTVIDQGNIPNRRGSLN 307
Query: 567 IDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLN 626
IDDEGNPT T LIE+GIL GYMQD NARLM +TGN RRES++ + +PRMTNT+M +
Sbjct: 308 IDDEGNPTGRTVLIEDGILTGYMQDETNARLMGAEVTGNGRRESYSSVVLPRMTNTFMES 367
Query: 627 GKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGH 686
G HP+EII S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++NG++ YPVKGAT+IG
Sbjct: 368 GGHHPQEIIESIDKGIYAANFGGGQVDITSGKFVFSASEAWWVENGRLQYPVKGATIIGS 427
Query: 687 GPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS-ITVGGTN 737
G +LK VSMIGND LD GVGVCGKDGQ VPVGVGQPTL+ID+ +TVGG+
Sbjct: 428 GSEVLKHVSMIGNDSALDTGVGVCGKDGQSVPVGVGQPTLRIDAGLTVGGSE 479
>gi|238751396|ref|ZP_04612889.1| Protein tldD [Yersinia rohdei ATCC 43380]
gi|238710454|gb|EEQ02679.1| Protein tldD [Yersinia rohdei ATCC 43380]
Length = 481
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 269/481 (55%), Positives = 356/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L+ LL L+ + L +LG + + ++DYAD YFQ + +E WILE+ I+K G+++I
Sbjct: 3 LSFVSEQLLAANKLNHQDLFSVLGQLAERRLDYADLYFQSSYHEAWILEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D I+ N L + + RSI ++ NGK+ + I +L
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQITLNALQQSAHAARSIVRETGNGKVHTLGEIAH---QAL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y D + S++ +KI LL RV+K+AR D RV +V A+L+G Y+ IL+ DG + AD+
Sbjct: 120 YPLLDPLQSLSREDKIALLHRVDKVARAADKRVQEVSASLTGVYEQILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLE 495
RPLV+L V+++VE NG+RE G SG GGR+ Y+YF + + + + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEDNGKRERGASGGGGRFGYDYFLETVDGEVRADNFATEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+GSS FS +GK +AS+ T+VD+
Sbjct: 240 AVAAPAGAMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGSSVFSGQMGKLVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+A RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTMAGRRGSLAIDDEGVPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK PEEII+SV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+ GKIT
Sbjct: 360 MPRMTNTYMLAGKSTPEEIIASVEYGLYAPNFGGGQVDITSGKFVFSTSEAYLIEKGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
+ VKGATLIG G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 HAVKGATLIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|255068575|ref|ZP_05320430.1| TldD protein [Neisseria sicca ATCC 29256]
gi|255047167|gb|EET42631.1| TldD protein [Neisseria sicca ATCC 29256]
Length = 498
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 262/470 (55%), Positives = 349/470 (74%), Gaps = 3/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LLE L ++L K L + ++ VDYAD Y Q T E+W LEEGIVK+G+F I+QGVGVR
Sbjct: 30 LLEANHLSPELLAKSLSIIGEHHVDYADIYCQRTAFESWHLEEGIVKSGSFQIDQGVGVR 89
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+SG+KTAF Y+D + +++ + ++ R I + G +K S+++ + I
Sbjct: 90 AVSGEKTAFAYADSLCIDSINRSAQAVRVIG--AAGGEASVKVPSAAYGKSVHAVLNPII 147
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ K+ LL +VE +A+ DPR+++V+A L+ EYD+I I R DG ADIRP+V+L V
Sbjct: 148 GLDSAAKVALLNKVETLAKAADPRIVQVMAGLTCEYDMIYIARLDGRHAADIRPMVRLNV 207
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVL 508
T+I ++ RRE G++G GGRY+ YF + ++ + V ++V ALINLE++PAPAG M VVL
Sbjct: 208 TVIAKQGDRREQGSAGGGGRYDLAYFDETLVRQFVDSAVKQALINLESRPAPAGEMTVVL 267
Query: 509 GPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINID 568
G GWPG+LLHEA+GHGLEGDFNRK +S FS IG+R+A+K +T+VD G + +RRGS+NID
Sbjct: 268 GNGWPGVLLHEAVGHGLEGDFNRKETSVFSGRIGERVAAKGVTVVDQGDIVDRRGSLNID 327
Query: 569 DEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGK 628
DEGN T+ T LIE+GIL GYMQD NARLM TGN RRES+A P+PRMTNT+M NG
Sbjct: 328 DEGNETRRTVLIEDGILVGYMQDETNARLMGTQSTGNGRRESYASAPMPRMTNTFMENGG 387
Query: 629 FHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGP 688
+ P+EII+S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++ GK+ YPVKGAT+IG+GP
Sbjct: 388 YEPDEIIASIDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEGGKLQYPVKGATIIGNGP 447
Query: 689 NILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS-ITVGGTN 737
+LK VSMIGND LD GVGVCGKDGQ VPVGVGQPTL+ID+ +TVGG+
Sbjct: 448 EVLKHVSMIGNDTALDSGVGVCGKDGQSVPVGVGQPTLRIDAGLTVGGSE 497
>gi|167031962|ref|YP_001667193.1| peptidase U62 modulator of DNA gyrase [Pseudomonas putida GB-1]
gi|166858450|gb|ABY96857.1| peptidase U62 modulator of DNA gyrase [Pseudomonas putida GB-1]
Length = 479
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 264/469 (56%), Positives = 350/469 (74%), Gaps = 2/469 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L L +LG + +D AD YFQ +E W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGLTLDSLQSVLGELAGPGIDAADLYFQGQISETWALEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ L +A ++ RSI+ G+ ++ + ++ +LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAINLEALTSAARAARSISRA--GQNGTVQAFRSQEVTALYAADNPLD 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ EK++LL+RV+ R DPR+ +V +++G ++ ILI DG + AD+RPLV+ V
Sbjct: 130 VLSRAEKVELLKRVDAATRALDPRIQQVSVSMAGVWERILIAAADGSLAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVL 508
++IVE+NGRRE G G GGR +Y +FT+ + ++ AL+NLEA PAPAG + VVL
Sbjct: 190 SVIVEQNGRRERGGQGGGGRTDYRFFTEERVMGYAREALRQALVNLEAIPAPAGTLPVVL 249
Query: 509 GPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINID 568
G GW G+LLHEA+GHGLEGDFNRKGSSAFS IG+++AS TIVD+GTL RRGS+++D
Sbjct: 250 GSGWSGVLLHEAVGHGLEGDFNRKGSSAFSGRIGEKVASSLCTIVDDGTLEGRRGSLSVD 309
Query: 569 DEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGK 628
DEG PT+CTTLIENG+LKGYMQD +NARLM M++TGN RRES+AH+P+PRMTNTYM G+
Sbjct: 310 DEGTPTECTTLIENGVLKGYMQDKLNARLMGMAVTGNGRRESYAHLPMPRMTNTYMRAGE 369
Query: 629 FHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGP 688
P+EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+GP
Sbjct: 370 SDPQEIIASVKKGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGNGP 429
Query: 689 NILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
+ +VSM+GND+ LD GVG CGKDGQ VPVGVGQPTLK+D+ITVGGT
Sbjct: 430 EAMSRVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKLDAITVGGTG 478
>gi|409201259|ref|ZP_11229462.1| suppressor of CsrA inhibitory activity; peptidase; involved in the
control of DNA gyrase [Pseudoalteromonas flavipulchra
JG1]
Length = 479
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 261/473 (55%), Positives = 346/473 (73%), Gaps = 7/473 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL L + L + L + ++KV+YAD YFQ + +E W+LE+GIVK G+++I +GVGVR
Sbjct: 8 LLTNSQLTREQLSQTLEYIHQHKVNYADLYFQSSYHETWVLEDGIVKDGSYNIERGVGVR 67
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+SG+KT F YSD I+ L A ++ RSIA G+ ++ +K + I+
Sbjct: 68 AVSGEKTGFSYSDAINIEALTKAAEAARSIAQA--GESSKVQVFSDVKAPIQFQPAQPIT 125
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
S++ +K+ LL +E+ R P +V+++LS Y+ +LI +DG DIRPL++L
Sbjct: 126 SMSDADKVALLRELEQCIRDLAPEAQQVVSSLSAVYEEVLIAASDGTFATDIRPLIRLNC 185
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLEAKPAPAGI 503
++++EKNGRRE G++G G R +Y YF +++ + +V A +NLEA APAG
Sbjct: 186 SVLLEKNGRRERGSAGGGARLDYGYFKELVDGAPRWMQFAKEAVRQARVNLEAIDAPAGA 245
Query: 504 MKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRG 563
M VVLG GWPG+LLHEA+GHGLEGDFNRKG+SAFS IG+++AS T+VD+GT+A+RRG
Sbjct: 246 MPVVLGSGWPGVLLHEAVGHGLEGDFNRKGASAFSGKIGEQVASSLCTVVDDGTIADRRG 305
Query: 564 SINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTY 623
S+N+DDEG P LIENGILKGYMQD NA LM ++ TGNARRES+AH+P+PRMTNTY
Sbjct: 306 SLNVDDEGTPAAYNVLIENGILKGYMQDKQNASLMGVAPTGNARRESYAHLPMPRMTNTY 365
Query: 624 MLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATL 683
ML G+ EEII SV G++A+NF GGQVDIT+GKFVFSAS+AY+I+NGKIT P+KGATL
Sbjct: 366 MLAGEHSQEEIIRSVDKGIFASNFGGGQVDITSGKFVFSASEAYLIENGKITQPIKGATL 425
Query: 684 IGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
IG+GP ++KKVSM+GND+ LD GVGVCGKDGQ VPVGVGQP+LKID ITVGGT
Sbjct: 426 IGNGPEVMKKVSMVGNDLALDRGVGVCGKDGQSVPVGVGQPSLKIDEITVGGT 478
>gi|319639483|ref|ZP_07994232.1| TLDD protein [Neisseria mucosa C102]
gi|317399249|gb|EFV79921.1| TLDD protein [Neisseria mucosa C102]
Length = 480
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 261/470 (55%), Positives = 346/470 (73%), Gaps = 3/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LLE L +L + L + N VDYAD Y Q T E+W LEEGIVK+G+F I+QGVG R
Sbjct: 12 LLEANHLSPDLLAQSLSIIGANHVDYADIYCQRTAYESWHLEEGIVKSGSFQIDQGVGAR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+SGDKTAF Y+D + +++ + K+ R I + G +K ++ D I+
Sbjct: 72 AVSGDKTAFAYADSLCIDSINRSAKAVRVIG--AAGGEASVKVPTPAYGKPVHMAIDPIA 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
S++ K+ LL +VE +A+ DPR+++V+A L+ EYD++ I R DG ADIRP+V++ V
Sbjct: 130 SLDSAAKVALLNKVETLAKAADPRIVQVMAGLTCEYDMVYIARLDGKHAADIRPMVRMNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVL 508
T+I ++ RRE G++G GGRY+ YF + ++ + V ++V AL NLE++PAPAG M VVL
Sbjct: 190 TVIAKQGERREQGSAGGGGRYDLAYFDENLVHRFVDSAVKQALTNLESRPAPAGEMTVVL 249
Query: 509 GPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINID 568
G GWPG+LLHEA+GHGLEGDFNRK +S FS IG+R+A+K +T+VD G +A+RRGS+NID
Sbjct: 250 GNGWPGVLLHEAVGHGLEGDFNRKETSVFSGRIGERVAAKGVTVVDQGDIADRRGSLNID 309
Query: 569 DEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGK 628
DEGN T+ T LIE+GIL GYMQD NARLM TGN RRES+A P+PRMTNT+M NG
Sbjct: 310 DEGNETRRTVLIEDGILVGYMQDETNARLMGTQSTGNGRRESYASAPMPRMTNTFMENGG 369
Query: 629 FHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGP 688
+ PEEII+S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++ GK+ YPVKGAT+IG+GP
Sbjct: 370 YDPEEIIASIDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEGGKLQYPVKGATIIGNGP 429
Query: 689 NILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS-ITVGGTN 737
+LK VSMIGND LD G+GVCGK+GQ VPVGVGQPTL+ID+ +TVGG+
Sbjct: 430 EVLKHVSMIGNDSALDSGIGVCGKEGQSVPVGVGQPTLRIDAGLTVGGSE 479
>gi|26987676|ref|NP_743101.1| tldD protein [Pseudomonas putida KT2440]
gi|24982361|gb|AAN66565.1|AE016285_3 tldD protein [Pseudomonas putida KT2440]
Length = 479
Score = 540 bits (1391), Expect = e-150, Method: Compositional matrix adjust.
Identities = 264/469 (56%), Positives = 350/469 (74%), Gaps = 2/469 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L L +LG + +D AD YFQ +E W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGLTLDSLQSVLGELAGPGIDAADLYFQGQISETWALEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ L +A ++ RSI+ G+ ++ + ++ +LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAINLEALTSAARAARSISRA--GQNGTVQAFRSQEVAALYTADNPLD 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ EK++LL+RV+ R DPR+ +V +++G ++ ILI DG + AD+RPLV+ V
Sbjct: 130 VLSRAEKVELLKRVDAATRALDPRIQQVSVSMAGVWERILIAAADGSLAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVL 508
++IVE+NGRRE G G GGR +Y +FT+ + ++ AL+NLEA PAPAG + VVL
Sbjct: 190 SVIVEQNGRRERGGQGGGGRTDYRFFTEERVMGYAREALRQALVNLEAIPAPAGTLPVVL 249
Query: 509 GPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINID 568
G GW G+LLHEA+GHGLEGDFNRKGSSAFS IG+++AS TIVD+GTL RRGS+++D
Sbjct: 250 GSGWSGVLLHEAVGHGLEGDFNRKGSSAFSGRIGEKVASSLCTIVDDGTLEGRRGSLSVD 309
Query: 569 DEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGK 628
DEG PT+CTTLIENG+LKGYMQD +NARLM M++TGN RRES+AH+P+PRMTNTYM G+
Sbjct: 310 DEGTPTECTTLIENGVLKGYMQDKLNARLMGMAVTGNGRRESYAHLPMPRMTNTYMRAGE 369
Query: 629 FHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGP 688
P+EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+GP
Sbjct: 370 SDPQEIIASVKKGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGNGP 429
Query: 689 NILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
+ +VSM+GND+ LD GVG CGKDGQ VPVGVGQPTLK+D+ITVGGT
Sbjct: 430 EAMSRVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKLDAITVGGTG 478
>gi|225076170|ref|ZP_03719369.1| hypothetical protein NEIFLAOT_01202 [Neisseria flavescens
NRL30031/H210]
gi|224952513|gb|EEG33722.1| hypothetical protein NEIFLAOT_01202 [Neisseria flavescens
NRL30031/H210]
Length = 480
Score = 540 bits (1390), Expect = e-150, Method: Compositional matrix adjust.
Identities = 260/469 (55%), Positives = 348/469 (74%), Gaps = 3/469 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LLE L ++L + L + + VDYAD Y Q T E+W LEEGIVK+G+F I+QGVGVR
Sbjct: 12 LLEANRLSPELLAQSLSIIGAHHVDYADIYCQRTAYESWHLEEGIVKSGSFQIDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+SGDKTAF Y+D + +++ + ++ R+I + G +K ++ D I+
Sbjct: 72 AVSGDKTAFAYADSLCIDSINRSARAVRAIG--AAGGEASVKVPTPAYGKPVHIAVDPIA 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ K+ LL +VE +A+ DPR+++V+A L+ EYD++ + R DG ADIRP+V+L V
Sbjct: 130 GLDSAAKVALLNKVETLAKAADPRIVQVMAGLTCEYDMVYLARLDGKHAADIRPMVRLNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVL 508
T+I ++ RRE G++G GGR + YF + ++ + V ++V ALINLE++PAPAG M VVL
Sbjct: 190 TVIAKQGDRREQGSAGGGGRCDLAYFDETLVRQFVDSAVKQALINLESRPAPAGEMTVVL 249
Query: 509 GPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINID 568
G GWPG+LLHEA+GHGLEGDFNRK +S FS IG+R+A+K +T+VD G +A+RRGS+NID
Sbjct: 250 GNGWPGVLLHEAVGHGLEGDFNRKETSVFSGRIGERVAAKGVTVVDQGDIADRRGSLNID 309
Query: 569 DEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGK 628
DEGN T+ T LIE+GIL GYMQD NARLM TGN RRES+A P+PRMTNT+M NG
Sbjct: 310 DEGNETRRTVLIEDGILVGYMQDETNARLMGTQSTGNGRRESYASAPMPRMTNTFMENGG 369
Query: 629 FHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGP 688
+ PEEII+S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++ GK+ YPVKGAT+IG+GP
Sbjct: 370 YEPEEIIASIDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEGGKLQYPVKGATIIGNGP 429
Query: 689 NILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS-ITVGGT 736
+LK VSMIGND LD GVGVCGK+GQ VPVGVGQPTL+ID+ +TVGG+
Sbjct: 430 EVLKHVSMIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAGLTVGGS 478
>gi|398801089|ref|ZP_10560337.1| putative Zn-dependent protease-like protein [Pantoea sp. GM01]
gi|398092731|gb|EJL83137.1| putative Zn-dependent protease-like protein [Pantoea sp. GM01]
Length = 481
Score = 540 bits (1390), Expect = e-150, Method: Compositional matrix adjust.
Identities = 259/481 (53%), Positives = 350/481 (72%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL ++++ L +LG + + ++DYAD YFQ + +E+W+LE+ I+K G++ I
Sbjct: 3 LNLVSEQLLTANSINQQDLYSLLGQLSERRLDYADLYFQSSFHESWVLEDKIIKDGSYHI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D IS N L + ++ RSI Q NGK + + SL
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQISLNALRQSSEAARSIVREQGNGKAHTLSAVLN---RSL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ + + S+ +KI LL RV+++AR DPRV +V A+LSG Y+ +L+ DG + ADI
Sbjct: 120 YAPVNPLDSLTREDKIALLHRVDQVARAADPRVQEVNASLSGVYEQVLVAATDGTLAADI 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L +++ VE G+RE G+SG G R Y +F D+ + +V AL+NL
Sbjct: 180 RPLVRLSISVQVEDQGKRERGSSGGGARTGYEFFLADENGDVRADAWAREAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG++ VVLG GWPG+LLHEA+GHGLEGDFNR+ +S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGMLPVVLGAGWPGVLLHEAVGHGLEGDFNRRATSVFSGKMGQLVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ RGS+ +DDEG P Q LIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTIEGLRGSLAVDDEGVPGQYNMLIENGVLKGYMQDKLNARLMGVNPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P++II SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLAGKSTPQDIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+ LD GVGVCGK+GQ VPVGVGQPTLK+D ITVGG
Sbjct: 420 TPVKGATLIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSVPVGVGQPTLKLDKITVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|381159304|ref|ZP_09868537.1| putative Zn-dependent protease-like protein [Thiorhodovibrio sp.
970]
gi|380880662|gb|EIC22753.1| putative Zn-dependent protease-like protein [Thiorhodovibrio sp.
970]
Length = 480
Score = 540 bits (1390), Expect = e-150, Method: Compositional matrix adjust.
Identities = 265/480 (55%), Positives = 352/480 (73%), Gaps = 9/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L +AR +L P L + L +++G + +VD AD YFQ ++ ++W LE+GI+K G+F+I
Sbjct: 5 LTLARDRILAPVGLADGDLDRLIGALRSPRVDAADIYFQSSRLQSWTLEDGIIKDGHFNI 64
Query: 322 NQGVGVRAISGDKTAFFYSDDIS-KNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSL 380
+G G+RAISG+KT F YSD++ A + + G++ I +
Sbjct: 65 ERGAGLRAISGEKTGFAYSDELEFPALAQAADAARAIARANAEGQVSISPGAA---VARR 121
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y D I S+ +K+ LL+RV+ AR DPRV +VI +L D IL+ R+DGL+ AD+
Sbjct: 122 YQPIDPIDSLPDGDKVDLLKRVDAEARRCDPRVKEVIVSLVAVQDTILVVRDDGLMSADV 181
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVS---NSVNSALINLEAK 497
RPL++L V +IVE+ GRRE G+ G G R + Y + ++ +S +V AL+ L+A
Sbjct: 182 RPLMRLNVNVIVEQAGRREQGSMGGGARRDLGYLLEE--DRALSFAHEAVRQALLKLDAV 239
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+SAFS +G+++A+K +T+VD+GT
Sbjct: 240 EAPAGSMPVVLGNGWPGVLLHEAVGHGLEGDFNRKGTSAFSGRLGEQVAAKGVTVVDDGT 299
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
L RRGS+NIDDEG PTQCTTLIE+GIL GYMQD +NARLM ++ TGN RRES+AH+P+P
Sbjct: 300 LDGRRGSLNIDDEGEPTQCTTLIEDGILVGYMQDRLNARLMKVNPTGNGRRESYAHLPMP 359
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNTYM G+ PEEII+SV+ GLYA NF GGQVDIT+GKFVFSAS+AY+I+NGKI P
Sbjct: 360 RMTNTYMRPGQHDPEEIIASVERGLYAVNFGGGQVDITSGKFVFSASEAYLIENGKIGRP 419
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
VKGATLIG+GP++L +VSM+G+D++LDPG+G CGKDGQ +PVGVGQPTLKIDS+TVGGT
Sbjct: 420 VKGATLIGNGPDVLTRVSMVGHDLELDPGIGTCGKDGQSLPVGVGQPTLKIDSLTVGGTE 479
>gi|238789798|ref|ZP_04633580.1| Protein tldD [Yersinia frederiksenii ATCC 33641]
gi|238722157|gb|EEQ13815.1| Protein tldD [Yersinia frederiksenii ATCC 33641]
Length = 481
Score = 540 bits (1390), Expect = e-150, Method: Compositional matrix adjust.
Identities = 269/481 (55%), Positives = 356/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L+ LL L+ + L +LG + + ++DYAD YFQ + +E W+LE+ I+K G+++I
Sbjct: 3 LSFVSEQLLAANKLNHQDLFSVLGQLAERRLDYADLYFQSSYHEAWVLEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D I+ N L + + RSI S NGK+ + I +L
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQITLNALQQSAHAARSIVRDSGNGKVHTLGEISH---KAL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y D + S++ +KI LL RV+K+AR D RV +V A+L+G Y+ IL+ DG + AD+
Sbjct: 120 YPLLDPLQSLSREDKIALLHRVDKVARAADQRVQEVSASLTGVYEQILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLE 495
RPLV+L V+++VE+NG+RE G SG GGR+ Y+YF +M+ + + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEENGKRERGASGGGGRFGYDYFLEMVDGEVRADNFANEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+GSS FS +GK +AS+ T+VD+
Sbjct: 240 AIAAPAGAMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGSSVFSGQMGKLVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTMQGRRGSLAIDDEGVPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK PEEII+SV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+ GKIT
Sbjct: 360 MPRMTNTYMLAGKSTPEEIIASVEYGLYAPNFGGGQVDITSGKFVFSTSEAYLIEKGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
+ VKGATLIG G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 HAVKGATLIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|349574819|ref|ZP_08886752.1| U62 family peptidase 2 TldD [Neisseria shayeganii 871]
gi|348013607|gb|EGY52518.1| U62 family peptidase 2 TldD [Neisseria shayeganii 871]
Length = 483
Score = 540 bits (1390), Expect = e-150, Method: Compositional matrix adjust.
Identities = 262/470 (55%), Positives = 350/470 (74%), Gaps = 2/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL L E L L + ++VDYAD Y Q T E+W LEEG+VK+G+F I+QGVGVR
Sbjct: 13 LLHANRLHEHHLAAALAQIGSHRVDYADIYCQHTAFESWHLEEGMVKSGSFQIDQGVGVR 72
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+SG+KTAF YSD+++ L A ++ R+I + ++ + + LY + I+
Sbjct: 73 AVSGEKTAFAYSDNLTAEALAQAARAVRTIGAAGQNRSADLR-FQVASVPPLYDAANPIA 131
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ K+ LLE+VE++A+ DPR+++V+A L+ EY+++ + R DG + ADIRPLV+L V
Sbjct: 132 GLDSAVKVALLEKVEQLAKAADPRIVQVMAGLTCEYEMVYLARLDGRVAADIRPLVRLSV 191
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVL 508
T++ ++ RRE G++G GGR+ YF D + V +V AL NLE++PAPAG M VVL
Sbjct: 192 TVVAKQGERREAGSAGGGGRFGLAYFDDGCVRGYVQAAVAQALTNLESRPAPAGAMTVVL 251
Query: 509 GPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINID 568
G GWPG+LLHEA+GHGLEGDFNRKG+SAF+ IG+R+A+K +T+VD G + RRGS+++D
Sbjct: 252 GSGWPGVLLHEAVGHGLEGDFNRKGTSAFAGRIGERVAAKGVTVVDQGNIEGRRGSLSLD 311
Query: 569 DEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGK 628
DEGN T+ T LIE+GIL GY+QD NARLM ++TGN RRES+A +P+PRMTNTYM NG
Sbjct: 312 DEGNETRRTVLIEDGILTGYLQDETNARLMGTAVTGNGRRESYASVPMPRMTNTYMENGS 371
Query: 629 FHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGP 688
PEEII+S+ GLYA NF GGQVDIT+GKFVFSAS+A+ ++NGK+ YPVKGAT+IG+GP
Sbjct: 372 HEPEEIIASIDKGLYAVNFGGGQVDITSGKFVFSASEAWWVENGKLQYPVKGATIIGNGP 431
Query: 689 NILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS-ITVGGTN 737
+LK VSMIGND LDPGVGVCGKDGQ VPVGVGQPTL+ID+ +TVGG+
Sbjct: 432 EVLKHVSMIGNDTALDPGVGVCGKDGQSVPVGVGQPTLRIDAGLTVGGSE 481
>gi|378980943|ref|YP_005229084.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae HS11286]
gi|419972304|ref|ZP_14487733.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae KPNIH1]
gi|419978299|ref|ZP_14493596.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae KPNIH2]
gi|419986165|ref|ZP_14501300.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae KPNIH4]
gi|419989255|ref|ZP_14504232.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae KPNIH5]
gi|419995383|ref|ZP_14510190.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae KPNIH6]
gi|420001256|ref|ZP_14515912.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae KPNIH7]
gi|420007206|ref|ZP_14521701.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae KPNIH8]
gi|420013087|ref|ZP_14527399.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae KPNIH9]
gi|420018810|ref|ZP_14533006.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae KPNIH10]
gi|420026362|ref|ZP_14540365.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae KPNIH11]
gi|420029736|ref|ZP_14543565.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae KPNIH12]
gi|420037428|ref|ZP_14551082.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae KPNIH14]
gi|420041220|ref|ZP_14554717.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae KPNIH16]
gi|420047526|ref|ZP_14560843.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae KPNIH17]
gi|420052692|ref|ZP_14565872.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae KPNIH18]
gi|420060239|ref|ZP_14573240.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae KPNIH19]
gi|420064982|ref|ZP_14577790.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae KPNIH20]
gi|420072052|ref|ZP_14584693.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae KPNIH21]
gi|420076784|ref|ZP_14589253.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae KPNIH22]
gi|420084831|ref|ZP_14597078.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae KPNIH23]
gi|421910512|ref|ZP_16340293.1| TldD protein, part of TldE/TldD proteolytic complex [Klebsiella
pneumoniae subsp. pneumoniae ST258-K26BO]
gi|421914194|ref|ZP_16343843.1| TldD protein, part of TldE/TldD proteolytic complex [Klebsiella
pneumoniae subsp. pneumoniae ST258-K28BO]
gi|428149642|ref|ZP_18997456.1| TldD protein, part of proposed TldE/TldD proteolytic complex (PMID
12029038) [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
gi|428939703|ref|ZP_19012806.1| protease TldD [Klebsiella pneumoniae VA360]
gi|364520354|gb|AEW63482.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae HS11286]
gi|397349128|gb|EJJ42224.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae KPNIH4]
gi|397352132|gb|EJJ45213.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae KPNIH1]
gi|397352582|gb|EJJ45661.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae KPNIH2]
gi|397368136|gb|EJJ60744.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae KPNIH6]
gi|397370087|gb|EJJ62679.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae KPNIH5]
gi|397372147|gb|EJJ64643.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae KPNIH7]
gi|397380998|gb|EJJ73176.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae KPNIH9]
gi|397385318|gb|EJJ77422.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae KPNIH8]
gi|397390053|gb|EJJ81975.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae KPNIH10]
gi|397395492|gb|EJJ87198.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae KPNIH11]
gi|397402947|gb|EJJ94542.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae KPNIH12]
gi|397405359|gb|EJJ96822.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae KPNIH14]
gi|397417312|gb|EJK08481.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae KPNIH17]
gi|397418827|gb|EJK09981.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae KPNIH16]
gi|397424824|gb|EJK15712.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae KPNIH18]
gi|397432820|gb|EJK23477.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae KPNIH20]
gi|397434100|gb|EJK24740.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae KPNIH19]
gi|397439538|gb|EJK29977.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae KPNIH21]
gi|397446740|gb|EJK36948.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae KPNIH22]
gi|397449802|gb|EJK39925.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae KPNIH23]
gi|410115606|emb|CCM82918.1| TldD protein, part of TldE/TldD proteolytic complex [Klebsiella
pneumoniae subsp. pneumoniae ST258-K26BO]
gi|410123342|emb|CCM86468.1| TldD protein, part of TldE/TldD proteolytic complex [Klebsiella
pneumoniae subsp. pneumoniae ST258-K28BO]
gi|426303540|gb|EKV65708.1| protease TldD [Klebsiella pneumoniae VA360]
gi|427540402|emb|CCM93594.1| TldD protein, part of proposed TldE/TldD proteolytic complex (PMID
12029038) [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
Length = 481
Score = 540 bits (1390), Expect = e-150, Method: Compositional matrix adjust.
Identities = 262/481 (54%), Positives = 361/481 (75%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L+ + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLSANGLNHQDLFAILGQLTERRLDYGDLYFQSSYHESWVLEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D ISK L + ++ R+I + NGK++ + ++ +L
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQISKLALEQSAQAARTIVRDTGNGKVQTLGAVEH---RAL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S+ EK+ +L RV+K+AR D RV +V A+LSG Y++ILI DG + AD+
Sbjct: 120 YTSIDPLQSMTREEKLDILRRVDKVARAADQRVQEVSASLSGVYELILIAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE++G+RE G+SG GGR+ Y+YF D+ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEEDGKRERGSSGGGGRFGYDYFLASQEGDVRADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG++ VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGMLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGHMGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+A+RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTIADRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G+ P+EII SV G++A NF GGQVDIT+GKFVFS S+AY+I+ GK+T
Sbjct: 360 MPRMTNTYMLAGQSTPQEIIESVDYGIFAPNFGGGQVDITSGKFVFSTSEAYLIEKGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
VKGATLIG G ++++SM+GND++LD GVGVCGK+GQ VPVGVGQPTLK+D++TVGG
Sbjct: 420 KAVKGATLIGSGIETMQQISMVGNDLRLDNGVGVCGKEGQSVPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|325273344|ref|ZP_08139612.1| peptidase U62 modulator of DNA gyrase [Pseudomonas sp. TJI-51]
gi|324101522|gb|EGB99100.1| peptidase U62 modulator of DNA gyrase [Pseudomonas sp. TJI-51]
Length = 479
Score = 540 bits (1390), Expect = e-150, Method: Compositional matrix adjust.
Identities = 263/469 (56%), Positives = 349/469 (74%), Gaps = 2/469 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L L +LG + +D AD YFQ +E W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGLTLDSLQSVLGELAGPGIDAADLYFQGQISETWALEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ L +A ++ RSI+ G+ ++ + + +LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAINLEALTSAARAARSISRA--GQNGTVQAFRSPSVTALYAADNPLD 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ EK++LL+RV+ R DPR+ +V +++G ++ ILI DG + AD+RPLV+ V
Sbjct: 130 VLSRAEKVELLKRVDAATRALDPRIQQVSVSMAGVWERILIAAADGSLAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVL 508
++IVE+NGRRE G G GGR +Y +FT+ + ++ AL+NLEA PAPAG + VVL
Sbjct: 190 SVIVEQNGRRERGGQGGGGRTDYRFFTEERVMGYAREALRQALVNLEAIPAPAGTLPVVL 249
Query: 509 GPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINID 568
G GW G+LLHEA+GHGLEGDFNRKGSSAFS +G+++AS TIVD+GTL RRGS+++D
Sbjct: 250 GSGWSGVLLHEAVGHGLEGDFNRKGSSAFSGRVGEKVASSLCTIVDDGTLEGRRGSLSVD 309
Query: 569 DEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGK 628
DEG PT+CTTLIENG+LKGYMQD +NARLM M++TGN RRES+AH+P+PRMTNTYM G+
Sbjct: 310 DEGTPTECTTLIENGVLKGYMQDKLNARLMGMAVTGNGRRESYAHLPMPRMTNTYMRAGE 369
Query: 629 FHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGP 688
P+EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+GP
Sbjct: 370 SDPQEIIASVKKGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGNGP 429
Query: 689 NILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
+ +VSM+GND+ LD GVG CGKDGQ VPVGVGQPTLK+D+ITVGGT
Sbjct: 430 EAMSRVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKLDAITVGGTG 478
>gi|152972166|ref|YP_001337312.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
gi|238896750|ref|YP_002921495.1| protease TldD [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
gi|262042800|ref|ZP_06015953.1| U62 family peptidase 2 TldD [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|365143998|ref|ZP_09348438.1| protein tldD [Klebsiella sp. 4_1_44FAA]
gi|402778750|ref|YP_006634296.1| TldD protein, part of proposed TldE/TldD proteolytic complex
[Klebsiella pneumoniae subsp. pneumoniae 1084]
gi|419764907|ref|ZP_14291146.1| U62 family peptidase 2 TldD [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|424931528|ref|ZP_18349900.1| Protease TldD [Klebsiella pneumoniae subsp. pneumoniae KpQ3]
gi|425083434|ref|ZP_18486531.1| protein tldD [Klebsiella pneumoniae subsp. pneumoniae WGLW2]
gi|425093549|ref|ZP_18496633.1| protein tldD [Klebsiella pneumoniae subsp. pneumoniae WGLW5]
gi|428933710|ref|ZP_19007255.1| protease TldD [Klebsiella pneumoniae JHCK1]
gi|449051164|ref|ZP_21731851.1| protease TldD [Klebsiella pneumoniae hvKP1]
gi|150957015|gb|ABR79045.1| suppresses inhibitory activity of CsrA [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|238549077|dbj|BAH65428.1| suppresses inhibitory activity of CsrA [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
gi|259039867|gb|EEW40985.1| U62 family peptidase 2 TldD [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|363648780|gb|EHL87929.1| protein tldD [Klebsiella sp. 4_1_44FAA]
gi|397742035|gb|EJK89254.1| U62 family peptidase 2 TldD [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|402539702|gb|AFQ63851.1| TldD protein, part of proposed TldE/TldD proteolytic complex
[Klebsiella pneumoniae subsp. pneumoniae 1084]
gi|405598635|gb|EKB71837.1| protein tldD [Klebsiella pneumoniae subsp. pneumoniae WGLW2]
gi|405611094|gb|EKB83883.1| protein tldD [Klebsiella pneumoniae subsp. pneumoniae WGLW5]
gi|407805715|gb|EKF76966.1| Protease TldD [Klebsiella pneumoniae subsp. pneumoniae KpQ3]
gi|426304616|gb|EKV66756.1| protease TldD [Klebsiella pneumoniae JHCK1]
gi|448876348|gb|EMB11341.1| protease TldD [Klebsiella pneumoniae hvKP1]
Length = 481
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 261/481 (54%), Positives = 361/481 (75%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L+ + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLSANGLNHQDLFAILGQLTERRLDYGDLYFQSSYHESWVLEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D ISK L + ++ R+I + NGK++ + ++ +L
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQISKLALEQSAQAARTIVRDTGNGKVQTLGAVEH---RAL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S+ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTSIDPLQSMTREEKLDILRRVDKVARAADQRVQEVSASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE++G+RE G+SG GGR+ Y+YF D+ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEEDGKRERGSSGGGGRFGYDYFLASQEGDVRADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG++ VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGMLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGHMGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+A+RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTIADRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G+ P+EII SV G++A NF GGQVDIT+GKFVFS S+AY+I+ GK+T
Sbjct: 360 MPRMTNTYMLAGQSTPQEIIESVDYGIFAPNFGGGQVDITSGKFVFSTSEAYLIEKGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
VKGATLIG G ++++SM+GND++LD GVGVCGK+GQ VPVGVGQPTLK+D++TVGG
Sbjct: 420 KAVKGATLIGSGIETMQQISMVGNDLRLDNGVGVCGKEGQSVPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|146305898|ref|YP_001186363.1| C69 family peptidase [Pseudomonas mendocina ymp]
gi|421503302|ref|ZP_15950252.1| C69 family peptidase [Pseudomonas mendocina DLHK]
gi|145574099|gb|ABP83631.1| microcin-processing peptidase 2, Unknown type peptidase, MEROPS
family U62 [Pseudomonas mendocina ymp]
gi|400346095|gb|EJO94455.1| C69 family peptidase [Pseudomonas mendocina DLHK]
Length = 480
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 266/470 (56%), Positives = 350/470 (74%), Gaps = 3/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P +L L +LG + +D AD YFQ +E W+LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGELTLDSLSSVLGEVAGPGIDAADLYFQSQISETWVLEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ IS + L A ++ RSI+ G+ ++ ++ LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAISLDALSQAARAARSISRA--GQQGRVQAFASPQVTQLYAEGNPLD 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
+ EK++LL+R+++ R DPR+ +V +L+G +D IL+ +DG + ADIRPLV+ V
Sbjct: 130 VLERAEKVELLKRIDRATRALDPRIKQVTVSLAGVWDRILVAAHDGSLSADIRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVS-NSVNSALINLEAKPAPAGIMKVV 507
++IVE+NGRRE G G GGR +Y YF + + ++ AL+NLEA PAPAG + VV
Sbjct: 190 SVIVEQNGRRERGGHGGGGRTDYRYFLEEDRAMGYAREALRQALVNLEAIPAPAGTLPVV 249
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
+G GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+++AS TIVD+GTLA RRGS+++
Sbjct: 250 MGAGWSGVLLHEAVGHGLEGDFNRKGSSAYSGQVGQKVASSLCTIVDDGTLAGRRGSLSV 309
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PTQCTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML G
Sbjct: 310 DDEGTPTQCTTLIENGVLKGYMQDKLNARLMGVAATGNGRRESYAHLPMPRMTNTYMLAG 369
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ PEEII SVK G+Y N GGQVDIT+GKFVFS S+AY+I++G+IT PVKGATLIG+G
Sbjct: 370 ESDPEEIIRSVKKGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGRITAPVKGATLIGNG 429
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
P + +VSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 430 PEAMSRVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|392543339|ref|ZP_10290476.1| suppressor of CsrA inhibitory activity; peptidase; involved in the
control of DNA gyrase [Pseudoalteromonas piscicida JCM
20779]
Length = 479
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 260/473 (54%), Positives = 346/473 (73%), Gaps = 7/473 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL L + L + L + ++KV+YAD YFQ + +E W+LE+GIVK G+++I +GVGVR
Sbjct: 8 LLTNSQLTREQLSQTLEYIHQHKVNYADLYFQSSYHETWVLEDGIVKDGSYNIERGVGVR 67
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+SG+KT F YSD I+ L A ++ RSIA G+ ++ +K + I+
Sbjct: 68 AVSGEKTGFSYSDAINIEALTKAAEAARSIAQA--GESSKVQVFSDVKAPIQFQPAQPIT 125
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
S++ +K+ LL +E+ R P +V+++LS Y+ +LI +DG DIRPL++L
Sbjct: 126 SMSDADKVALLREIEQCIRDLAPEAQQVVSSLSAVYEEVLIAASDGTFATDIRPLIRLNC 185
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLEAKPAPAGI 503
++++EKNGRRE G++G G R +Y YF +++ + +V A +NL+A APAG
Sbjct: 186 SVLLEKNGRRERGSAGGGARLDYGYFKELVDGAPRWVQFAKEAVRQARVNLDAIDAPAGA 245
Query: 504 MKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRG 563
M VVLG GWPG+LLHEA+GHGLEGDFNRKG+SAFS IG+++AS T+VD+GT+A+RRG
Sbjct: 246 MPVVLGSGWPGVLLHEAVGHGLEGDFNRKGASAFSGKIGEQVASSLCTVVDDGTIADRRG 305
Query: 564 SINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTY 623
S+N+DDEG P LIENGILKGYMQD NA LM ++ TGNARRES+AH+P+PRMTNTY
Sbjct: 306 SLNVDDEGTPAAYNVLIENGILKGYMQDKQNASLMGVAPTGNARRESYAHLPMPRMTNTY 365
Query: 624 MLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATL 683
ML G+ EEII SV G++A+NF GGQVDIT+GKFVFSAS+AY+I+NGKIT P+KGATL
Sbjct: 366 MLAGEHSQEEIIRSVDKGIFASNFGGGQVDITSGKFVFSASEAYLIENGKITQPIKGATL 425
Query: 684 IGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
IG+GP ++KKVSM+GND+ LD GVGVCGKDGQ VPVGVGQP+LKID ITVGGT
Sbjct: 426 IGNGPEVMKKVSMVGNDLALDRGVGVCGKDGQSVPVGVGQPSLKIDEITVGGT 478
>gi|425074622|ref|ZP_18477725.1| protein tldD [Klebsiella pneumoniae subsp. pneumoniae WGLW1]
gi|425085258|ref|ZP_18488351.1| protein tldD [Klebsiella pneumoniae subsp. pneumoniae WGLW3]
gi|405594825|gb|EKB68215.1| protein tldD [Klebsiella pneumoniae subsp. pneumoniae WGLW1]
gi|405607290|gb|EKB80259.1| protein tldD [Klebsiella pneumoniae subsp. pneumoniae WGLW3]
Length = 481
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 261/481 (54%), Positives = 361/481 (75%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L+ + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLSANGLNHQDLFAILGQLTERRLDYGDLYFQSSYHESWVLEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D ISK L + ++ R+I + NGK++ + ++ +L
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQISKLALEQSAQAARTIVRDTGNGKVQTLGAVEH---RAL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S+ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTSIDPLQSMAREEKLDILRRVDKVARAADQRVQEVSASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE++G+RE G+SG GGR+ Y+YF D+ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEEDGKRERGSSGGGGRFGYDYFLASQEGDVRADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG++ VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGMLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGHMGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+A+RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTIADRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G+ P+EII SV G++A NF GGQVDIT+GKFVFS S+AY+I+ GK+T
Sbjct: 360 MPRMTNTYMLAGQSTPQEIIESVDYGIFAPNFGGGQVDITSGKFVFSTSEAYLIEKGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
VKGATLIG G ++++SM+GND++LD GVGVCGK+GQ VPVGVGQPTLK+D++TVGG
Sbjct: 420 KAVKGATLIGSGIETMQQISMVGNDLRLDNGVGVCGKEGQSVPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|423122366|ref|ZP_17110050.1| protein tldD [Klebsiella oxytoca 10-5246]
gi|376392692|gb|EHT05355.1| protein tldD [Klebsiella oxytoca 10-5246]
Length = 481
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 262/481 (54%), Positives = 360/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN LL L+ + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNRVSEQLLSANGLNHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D IS+ L + ++ R+I S +GK++ + ++ ++L
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQISRLALEQSAQAARTIVRDSGDGKVR---TLGAVEYSAL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K AR D RV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTSIDPLQSMSREEKLDILRRVDKAARAADKRVQEVSASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE +G+RE G+SG GGR+ Y+YF ++ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEDDGKRERGSSGGGGRFGYDYFLAAEDGEVRADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG++ VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGMLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGHMGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ANRRGS+ +DDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTIANRRGSLAVDDEGTPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV G+YA NF GGQVDIT+GKFVFS S+AY+I+ GK+T
Sbjct: 360 MPRMTNTYMLAGKSTPQEIIESVDYGIYAPNFGGGQVDITSGKFVFSTSEAYLIEKGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
VKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ VPVGVGQPTLK+D++TVGG
Sbjct: 420 KAVKGATLIGSGIEAMQQISMVGNDLKLDSGVGVCGKEGQSVPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|381402983|ref|ZP_09927667.1| protease TldD [Pantoea sp. Sc1]
gi|380736182|gb|EIB97245.1| protease TldD [Pantoea sp. Sc1]
Length = 481
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 259/481 (53%), Positives = 348/481 (72%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL ++++ L +LG + + ++DYAD YFQ + +E+W+LE+ I+K G++ I
Sbjct: 3 LNLVSEQLLTANGINQQDLFSLLGQLSERRLDYADLYFQSSFHESWVLEDKIIKDGSYHI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D I+ N L + + RSI Q NGK + + SL
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQITLNALRLSSDAARSIVREQGNGKAHTLSAVMN---RSL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y D ++S+ EKI LL RV+++AR DPRV +V A+L+G Y+ +L+ DG + AD+
Sbjct: 120 YPAVDPLNSLTREEKIALLHRVDQVARAADPRVQEVNASLTGVYEQVLVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V++ VE G+RE G SG G R Y +F ++ + +V AL+NL
Sbjct: 180 RPLVRLSVSVQVEDQGKRERGASGGGARTGYAFFLADENGEVRADAWAREAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG+++AS+ T+VD+
Sbjct: 240 AVAAPAGALPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGKIGQQVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTL RGS+ +DDEG P Q LIENG+LKGYMQD +NARLM +S TGN RRES+AH+P
Sbjct: 300 GTLEGLRGSLAVDDEGVPGQYNMLIENGVLKGYMQDKLNARLMGVSPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P++II SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+ GKIT
Sbjct: 360 MPRMTNTYMLAGKSTPQDIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIEKGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK+D +T+GG
Sbjct: 420 KPVKGATLIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLDKLTIGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|183597975|ref|ZP_02959468.1| hypothetical protein PROSTU_01325 [Providencia stuartii ATCC 25827]
gi|188022748|gb|EDU60788.1| TldD/PmbA family protein [Providencia stuartii ATCC 25827]
Length = 481
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 275/474 (58%), Positives = 356/474 (75%), Gaps = 9/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL LD + L LG + + K+DYAD YFQ + +E W+LE+ I+K G+++I+QGVGVR
Sbjct: 10 LLAANGLDHQKLYDTLGLLSERKIDYADLYFQSSYHEAWVLEDRIIKDGSYNIDQGVGVR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSI-ANQSNGKIKIIKNIKKIKINSLYSFTDTI 387
AISG+KT F Y+D +S L + + RSI + Q NGK +I+ + K LYS TD +
Sbjct: 70 AISGEKTGFAYADQVSLMALQQSATAARSIVSEQGNGKSQILTEVGYKK---LYSETDPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S++ +KI LL R++++AR +DPRVI+V A+L+G Y+ +L+ DG + ADIRPLV+L
Sbjct: 127 QSLSREDKIALLHRIDQVARAEDPRVIEVNASLTGVYEQVLVAATDGTLAADIRPLVRLS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYFTDM-----ILEKCVSNSVNSALINLEAKPAPAG 502
V+++VE G+RE G SG GGRY Y YF ++ + E+ +V AL+NL A APAG
Sbjct: 187 VSVLVEHEGKRERGASGGGGRYGYEYFLEIHQGQVLAEQYAKEAVRMALVNLSAIAAPAG 246
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
+M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG+ +AS T+VD+GT+A RR
Sbjct: 247 MMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQIGELVASSLCTVVDDGTIAGRR 306
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+ IDDEG P Q LIENGILK YMQD +NARLM ++ TGNARRES+AH+P+PRMTNT
Sbjct: 307 GSLAIDDEGVPGQYNVLIENGILKNYMQDKLNARLMGVAPTGNARRESYAHLPMPRMTNT 366
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML+G PEEIISSV G+YA NF GGQVDIT+GKFVFS S+AY+I+NGKIT PVKGAT
Sbjct: 367 YMLSGTSTPEEIISSVDKGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKITSPVKGAT 426
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
LIG G ++++SM+GND+ LD GVGVCGK+GQ VPVGVGQPTLK+D +TVGGT
Sbjct: 427 LIGSGVEAMQQISMVGNDLALDKGVGVCGKEGQSVPVGVGQPTLKLDKMTVGGT 480
>gi|431800959|ref|YP_007227862.1| peptidase U62 modulator of DNA gyrase [Pseudomonas putida HB3267]
gi|430791724|gb|AGA71919.1| peptidase U62 modulator of DNA gyrase [Pseudomonas putida HB3267]
Length = 479
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 266/470 (56%), Positives = 350/470 (74%), Gaps = 4/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L L +LG + +D AD YFQ +E W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGLTLDSLQSVLGELAGPGIDAADLYFQGQISETWALEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
A SG+KT F YS+ I+ L +A ++ RSI+ NGK++ ++ + +LY + +
Sbjct: 72 AQSGEKTGFAYSNAINLEALTSAARAARSISRAGQNGKVQAFRSQD---VTALYPADNPL 128
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
++ EK++LL+RV+ R DPR+ +V +++G ++ ILI DG + AD+RPLV+
Sbjct: 129 DVLSRAEKVELLKRVDAATRTLDPRIQQVSVSMAGVWERILIAAADGSLAADVRPLVRFN 188
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
V++IVE+NGRRE G G GGR +Y +FT+ + ++ AL+NLEA PAPAG + VV
Sbjct: 189 VSVIVEQNGRRERGGQGGGGRTDYRFFTEERVMGYAREALRQALVNLEAIPAPAGTLPVV 248
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LG GW G+LLHEA+GHGLEGDFNRKGSSAFS IG+++AS TIVD+GTL RRGS+++
Sbjct: 249 LGSGWSGVLLHEAVGHGLEGDFNRKGSSAFSGRIGEKVASSLCTIVDDGTLEGRRGSLSV 308
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PT+CTTLIENG+LKGYMQD +NARLM M++TGN RRES+AH+P+PRMTNTYM G
Sbjct: 309 DDEGTPTECTTLIENGVLKGYMQDKLNARLMGMALTGNGRRESYAHLPMPRMTNTYMRAG 368
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ P+EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+G
Sbjct: 369 ESDPQEIIASVKKGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGNG 428
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
P + +VSM+GND+ LD GVG CGKDGQ VPVGVGQPTLK+D+ITVGGT
Sbjct: 429 PEAMSRVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKLDAITVGGTG 478
>gi|336247423|ref|YP_004591133.1| protease TldD [Enterobacter aerogenes KCTC 2190]
gi|444354466|ref|YP_007390610.1| TldD protein, part of proposed TldE/TldD proteolytic complex (PMID
12029038) [Enterobacter aerogenes EA1509E]
gi|334733479|gb|AEG95854.1| protease TldD [Enterobacter aerogenes KCTC 2190]
gi|443905296|emb|CCG33070.1| TldD protein, part of proposed TldE/TldD proteolytic complex (PMID
12029038) [Enterobacter aerogenes EA1509E]
Length = 481
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 263/481 (54%), Positives = 362/481 (75%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L+ + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLSANGLNHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D ISK L + ++ R+I + +GK++ + ++ +SL
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQISKLALEQSAQAARTIVRDHGDGKVQ---TLGAVEYSSL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTSVDPLQSMSREEKLDILRRVDKVARAADKRVQEVSASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE++G+RE G SG GGR+ Y+YF D+ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEEDGKRERGASGGGGRFGYDYFLAPLDGDVRADVWAREAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG++ VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGMLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGHMGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+A+RRGS+ IDDEG P Q LIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTMADRRGSVAIDDEGTPGQYNVLIENGVLKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV G+YA NF GGQVDIT+GKFVFS S+AY+I+ GK+T
Sbjct: 360 MPRMTNTYMLAGKSTPQEIIESVDYGIYAPNFGGGQVDITSGKFVFSTSEAYLIEKGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
VKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ VPVGVGQPTLK+D++TVGG
Sbjct: 420 KAVKGATLIGSGIEAMQQISMVGNDLKLDSGVGVCGKEGQSVPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|350559562|ref|ZP_08928402.1| peptidase U62 modulator of DNA gyrase [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349781830|gb|EGZ36113.1| peptidase U62 modulator of DNA gyrase [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 480
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 266/476 (55%), Positives = 351/476 (73%), Gaps = 2/476 (0%)
Query: 263 NIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSIN 322
++ R LL+P + E L ++L F D D YFQF +E W LE+G+VK+ +F+I
Sbjct: 4 SLVRETLLDPGGVTESQLGEVLAAAFGRGTDGGDCYFQFVCHEGWSLEDGLVKSASFNIE 63
Query: 323 QGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYS 382
+GVG+R I+G++T F YSD+I+ ++ A ++ RSIA ++ ++ LY
Sbjct: 64 RGVGIRVIAGEQTGFAYSDEITLPAMLEAGRTARSIARSGQTASAAVRP-GAMRDVPLYL 122
Query: 383 FTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRP 442
D + S++ KI+LL+ V+ +AR DPRV +VI +LSG +++L+ +G +V D+RP
Sbjct: 123 PVDPLGSLDEGRKIELLKHVDAVARAADPRVTQVICSLSGVREMVLVLNAEGELVTDLRP 182
Query: 443 LVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVS-NSVNSALINLEAKPAPA 501
LV+L V ++VE++GRRE GN+G GGR Y YFT+ + +V AL+NLEA APA
Sbjct: 183 LVRLNVQVLVEQDGRRESGNAGGGGRSGYEYFTEGDRAGGYAREAVRQALVNLEAVDAPA 242
Query: 502 GIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANR 561
G MKVVLGPGWPG+LLHEAIGHGLEGDFNRKG+SAF+ IG+R+A+ ITIVD+GTL R
Sbjct: 243 GTMKVVLGPGWPGVLLHEAIGHGLEGDFNRKGTSAFAGRIGERVAAAGITIVDDGTLPGR 302
Query: 562 RGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTN 621
RGS+N+DDEG TQ T LIE+GIL+GYMQD +N RL TGN RRES+AH+P+PRMTN
Sbjct: 303 RGSLNVDDEGTVTQRTVLIEDGILRGYMQDRLNGRLSGSQSTGNGRRESYAHLPMPRMTN 362
Query: 622 TYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGA 681
TYML G PEEII+SV GLYA NF GGQVDIT+GKFVFSAS+AY+I+NG++T PVKGA
Sbjct: 363 TYMLAGDRAPEEIIASVDRGLYAVNFGGGQVDITSGKFVFSASEAYLIENGRVTRPVKGA 422
Query: 682 TLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
TLIG+GP++L +VSMIGND++LD GVG CGK+GQ VPVGVGQPTL++D +TVGGT
Sbjct: 423 TLIGNGPDVLTRVSMIGNDLELDTGVGTCGKEGQGVPVGVGQPTLRVDGMTVGGTQ 478
>gi|170723436|ref|YP_001751124.1| peptidase U62 modulator of DNA gyrase [Pseudomonas putida W619]
gi|169761439|gb|ACA74755.1| peptidase U62 modulator of DNA gyrase [Pseudomonas putida W619]
Length = 479
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 264/469 (56%), Positives = 349/469 (74%), Gaps = 2/469 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L L +LG + +D AD YFQ +E W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGLTLDSLQAVLGELAGPGIDAADLYFQGQISETWALEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ L +A ++ RSI+ G+ ++ + + +LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAINLEALTSAARAARSISRA--GQNGTVQAFRSQDVTALYAPDNPLD 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ EK++LL+RV+ R DPR+ +V +++G ++ ILI DG + AD+RPLV+ V
Sbjct: 130 VLSRAEKVELLKRVDAATRALDPRIQQVSVSMAGVWERILIAAADGSLAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVL 508
++IVE+NGRRE G G GGR +Y +FT+ + ++ AL+NLEA PAPAG + VVL
Sbjct: 190 SVIVEQNGRRERGGQGGGGRTDYRFFTEERVMGYAREALRQALVNLEAIPAPAGTLPVVL 249
Query: 509 GPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINID 568
G GW G+LLHEA+GHGLEGDFNRKGSSAFS IG+++AS TIVD+GTL RRGS+++D
Sbjct: 250 GSGWSGVLLHEAVGHGLEGDFNRKGSSAFSGRIGEKVASSLCTIVDDGTLEGRRGSLSVD 309
Query: 569 DEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGK 628
DEG PT+CTTLIENG+LKGYMQD +NARLM M++TGN RRES+AH+P+PRMTNTYM G+
Sbjct: 310 DEGTPTECTTLIENGVLKGYMQDKLNARLMGMAVTGNGRRESYAHLPMPRMTNTYMRAGE 369
Query: 629 FHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGP 688
P+EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+GP
Sbjct: 370 SDPQEIIASVKKGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGNGP 429
Query: 689 NILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
+ +VSM+GND+ LD GVG CGKDGQ VPVGVGQPTLK+D+ITVGGT
Sbjct: 430 EAMSRVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKLDAITVGGTG 478
>gi|398790923|ref|ZP_10551810.1| putative Zn-dependent protease-like protein [Pantoea sp. YR343]
gi|398217146|gb|EJN03679.1| putative Zn-dependent protease-like protein [Pantoea sp. YR343]
Length = 481
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 259/481 (53%), Positives = 349/481 (72%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL ++++ L +LG + + ++DYAD YFQ + +E+W+LE+ I+K G++ I
Sbjct: 3 LNLVSEQLLTANSINQQDLYSLLGQLSERRLDYADLYFQSSFHESWVLEDKIIKDGSYHI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D IS N L + ++ RSI Q NGK + + SL
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQISLNALRQSSEAARSIVREQGNGKAHTLSAVLN---RSL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ + + S+ +KI LL RV+K+AR DPRV +V A+LSG Y+ +L+ DG + ADI
Sbjct: 120 YAPVNPLDSLTREDKIALLHRVDKVARAADPRVQEVNASLSGVYEQVLVAATDGTLAADI 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L +++ VE G+RE G+SG G R Y +F D+ + +V AL+NL
Sbjct: 180 RPLVRLSISVQVEDQGKRERGSSGGGARTGYEFFLADESGDVRADAWAREAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG++ VVLG GWPG+LLHEA+GHGLEGDFNR+ +S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGMLPVVLGAGWPGVLLHEAVGHGLEGDFNRRATSVFSGKMGQLVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ RGS+ +DDEG P Q LIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTIEGLRGSLAVDDEGVPGQYNMLIENGVLKGYMQDKLNARLMGVNPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P++II SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+ GK+T
Sbjct: 360 MPRMTNTYMLAGKSTPQDIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIEKGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+ LD GVGVCGK+GQ VPVGVGQPTLK+D ITVGG
Sbjct: 420 KPVKGATLIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSVPVGVGQPTLKLDKITVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|386036790|ref|YP_005956703.1| protease TldD [Klebsiella pneumoniae KCTC 2242]
gi|424832627|ref|ZP_18257355.1| protein TldD [Klebsiella pneumoniae subsp. pneumoniae Ecl8]
gi|339763918|gb|AEK00139.1| protease TldD [Klebsiella pneumoniae KCTC 2242]
gi|414710070|emb|CCN31774.1| protein TldD [Klebsiella pneumoniae subsp. pneumoniae Ecl8]
Length = 481
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 261/481 (54%), Positives = 360/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L+ + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLSANGLNHQDLFAILGQLTERRLDYGDLYFQSSYHESWVLEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D ISK L + ++ R+I + NGK++ + ++ +L
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQISKLALEQSAQAARTIVRDTGNGKVQTLGAVEH---RAL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S+ EK+ +L RV+K+AR D RV V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTSIDPLQSMTREEKLDILRRVDKVARAADQRVQDVSASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE++G+RE G+SG GGR+ Y+YF D+ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEEDGKRERGSSGGGGRFGYDYFLASQEGDVRADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG++ VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGMLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGHMGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+A+RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTIADRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G+ P+EII SV G++A NF GGQVDIT+GKFVFS S+AY+I+ GK+T
Sbjct: 360 MPRMTNTYMLAGQSTPQEIIESVDYGIFAPNFGGGQVDITSGKFVFSTSEAYLIEKGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
VKGATLIG G ++++SM+GND++LD GVGVCGK+GQ VPVGVGQPTLK+D++TVGG
Sbjct: 420 KAVKGATLIGSGIETMQQISMVGNDLRLDNGVGVCGKEGQSVPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|421539039|ref|ZP_15985210.1| U62 family peptidase 2 TldD [Neisseria meningitidis 93003]
gi|402315151|gb|EJU50717.1| U62 family peptidase 2 TldD [Neisseria meningitidis 93003]
Length = 480
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 266/480 (55%), Positives = 351/480 (73%), Gaps = 4/480 (0%)
Query: 259 IHPLNIA-RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTG 317
+HP A ++ LLE L ++L K L + + VDYAD Y Q T E+W LEEGIVK+G
Sbjct: 1 MHPTYSAVQARLLEANRLSPELLAKSLCIIGAHHVDYADIYCQRTAYESWHLEEGIVKSG 60
Query: 318 NFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKI 377
+F INQGVGVRA+SGDKTAF Y+D + ++ IN + GK+ K + +
Sbjct: 61 SFQINQGVGVRAVSGDKTAFAYADSLCIDS-INRSARAIRAIGAAGGKVSA-KMPSETRG 118
Query: 378 NSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIV 437
+ S +D I+ ++ K+ LL +VE IA+ DPR+++V+A L+ EYD++ + R DG
Sbjct: 119 KPVCSASDPIAGLDSAAKVALLNKVEAIAKAADPRIVQVMAGLTCEYDMVYLARLDGKHA 178
Query: 438 ADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAK 497
ADIRP+V+L VT+I ++ RRE G++G GGR + YF + ++ + V +V AL NLE++
Sbjct: 179 ADIRPMVRLNVTVIAKQGERREQGSAGGGGRCDLAYFDETLVRQFVDAAVKQALTNLESR 238
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
PAPAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+R+A+K +T+VD G
Sbjct: 239 PAPAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKGTSVFSGRIGERVAAKGVTVVDQGD 298
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
+A RRGS+NIDDEGN T+ T LIE+GIL GYMQD NARL TGN RRES+A +P+P
Sbjct: 299 IAGRRGSLNIDDEGNETRRTVLIEDGILVGYMQDETNARLTGTQSTGNGRRESYASVPMP 358
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNT+M NG + PEEII+S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++ G++ YP
Sbjct: 359 RMTNTFMENGSYEPEEIIASIDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEGGRLQYP 418
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS-ITVGGT 736
VKGAT+IG+GP +LK VSMIGND LD GVGVCGK+GQ VPVGVGQPTL+ID+ +TVGG+
Sbjct: 419 VKGATIIGNGPEVLKHVSMIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAGLTVGGS 478
>gi|389798364|ref|ZP_10201383.1| putative Zn-dependent protease-like protein [Rhodanobacter sp.
116-2]
gi|388445186|gb|EIM01268.1| putative Zn-dependent protease-like protein [Rhodanobacter sp.
116-2]
Length = 479
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 275/478 (57%), Positives = 343/478 (71%), Gaps = 8/478 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+ +A S LL P + L ++ + +D AD YFQ +++E+W LEEGIVK G+ SI
Sbjct: 5 IALAESKLLFPGGIATGDLDRVFTQLMGPSIDAADLYFQHSRSESWTLEEGIVKDGSHSI 64
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA--NQSNGKIKIIKNIKKIKINS 379
QGVGVRAISG+KT F YSD+I L+ A ++ R+IA Q GK + ++ +
Sbjct: 65 EQGVGVRAISGEKTGFAYSDEIVLPQLLEASRAARAIARDGQGAGKPLALNGVR-----A 119
Query: 380 LYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVAD 439
LY D + S+ +KI LL V+ AR +DPR+ +VI +L+ D +LI +DG + AD
Sbjct: 120 LYPALDPVESLPNPDKIALLREVDAYARSRDPRIRQVIVSLAATIDTVLIAASDGTLAAD 179
Query: 440 IRPLVQLFVTIIVEKNGRRE-IGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKP 498
+RPLV++ V +I E+NGRRE G G + + +V AL+NLE+
Sbjct: 180 VRPLVRINVQVIAEQNGRREQGYAGGGGRYGYRELIENGRALRFADEAVRQALVNLESVD 239
Query: 499 APAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL 558
APAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAF+ +G+R+A+K +TIVDNGTL
Sbjct: 240 APAGQMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRLGQRVAAKGVTIVDNGTL 299
Query: 559 ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPR 618
RRGS++IDDEG P++CTTLIE+GILKGYMQD +NARLM M+ TGN RRESF +P+PR
Sbjct: 300 PGRRGSLSIDDEGTPSECTTLIEDGILKGYMQDKLNARLMGMAPTGNGRRESFTQLPMPR 359
Query: 619 MTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPV 678
MTNTYML G P EII SVK GLYA NF GGQVDITNGKF FSAS+AY+I+ GKIT PV
Sbjct: 360 MTNTYMLAGSHDPAEIIRSVKKGLYAPNFGGGQVDITNGKFTFSASEAYLIEGGKITRPV 419
Query: 679 KGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
KGATLIG GP +L +VSMIGND+ LD GVGVCGKDGQ VPVGVGQPTLKID++TVGGT
Sbjct: 420 KGATLIGSGPEVLNRVSMIGNDLALDEGVGVCGKDGQSVPVGVGQPTLKIDAMTVGGT 477
>gi|386828831|ref|ZP_10115938.1| putative Zn-dependent protease-like protein [Beggiatoa alba B18LD]
gi|386429715|gb|EIJ43543.1| putative Zn-dependent protease-like protein [Beggiatoa alba B18LD]
Length = 480
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 269/476 (56%), Positives = 350/476 (73%), Gaps = 3/476 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+A LL P L + ++L + ++DYAD YFQ + +E W LEEGIVK G+ SI
Sbjct: 5 LNLATEQLLRPSALSLTDISRVLDELINYQIDYADLYFQSSHSETWALEEGIVKEGSHSI 64
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QGVG+RAISGDKT F Y DDI TL+ A K+ R IA + G+ I +++ + Y
Sbjct: 65 EQGVGIRAISGDKTGFAYCDDIILPTLMEAAKTARCIAQR--GQSASIPILQQQTVTPRY 122
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + ++S+ EK+ LL + A +D RV + I L+G Y +IL+ +DG + ADIR
Sbjct: 123 ASLNPLNSLTASEKVNLLNELSLAAHREDARVKQAILTLNGAYKIILVAASDGTLAADIR 182
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFT-DMILEKCVSNSVNSALINLEAKPAP 500
PLV+L ++++VE+ GRRE+G +G GGR+ Y YFT D V +V A+ NL+A AP
Sbjct: 183 PLVRLNISVVVEEKGRRELGAAGGGGRFGYEYFTTDNRGLYYVKEAVRRAITNLDAIDAP 242
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG M VVLG GWPGILLHEAIGHGLEGDFNRKG+S F+ IG+++AS TIVD+GTLAN
Sbjct: 243 AGTMPVVLGAGWPGILLHEAIGHGLEGDFNRKGTSTFAGRIGEQVASPLCTIVDDGTLAN 302
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+ IDDEG TQCTTLIENGILKGYMQD NA+ + TGN RRES+A +P+PRMT
Sbjct: 303 RRGSLTIDDEGTSTQCTTLIENGILKGYMQDKQNAKFAGVKSTGNGRRESYACLPLPRMT 362
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTY+L G+ P++II+SV GLYA +F+GGQVDIT+GKFVF+AS+AY+I++GKIT PVKG
Sbjct: 363 NTYLLAGEDDPKDIIASVDKGLYAVHFNGGQVDITSGKFVFTASEAYLIEHGKITQPVKG 422
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
ATLIG+G ++L +VS +GND+KLD GVGVCGK+GQ +PVGVGQPTL++D +TVGGT
Sbjct: 423 ATLIGNGADVLTQVSRVGNDLKLDDGVGVCGKEGQSIPVGVGQPTLRVDRLTVGGT 478
>gi|339485901|ref|YP_004700429.1| peptidase U62 modulator of DNA gyrase [Pseudomonas putida S16]
gi|338836744|gb|AEJ11549.1| peptidase U62 modulator of DNA gyrase [Pseudomonas putida S16]
Length = 479
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 265/470 (56%), Positives = 350/470 (74%), Gaps = 4/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L L +LG + +D AD YFQ +E W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGLTLDSLQSVLGELAGPGIDAADLYFQGQISETWALEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
A SG+KT F YS+ I+ L +A ++ RSI+ NGK++ ++ + +LY + +
Sbjct: 72 AQSGEKTGFAYSNAINLEALTSAARAARSISRAGQNGKVQAFRSQD---VTALYPADNPL 128
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
++ EK++LL+RV+ R DPR+ +V +++G ++ ILI DG + AD+RPLV+
Sbjct: 129 DVLSRAEKVELLKRVDAATRALDPRIQQVSVSMAGVWERILIAAADGSLAADVRPLVRFN 188
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
V++IVE+NGRRE G G GGR +Y +FT+ + ++ AL+NLEA PAPAG + VV
Sbjct: 189 VSVIVEQNGRRERGGQGGGGRTDYRFFTEERVMGYAREALRQALVNLEAIPAPAGTLPVV 248
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LG GW G+LLHEA+GHGLEGDFNRKGSSAFS IG+++AS TIVD+GTL RRGS+++
Sbjct: 249 LGSGWSGVLLHEAVGHGLEGDFNRKGSSAFSGRIGEKVASSLCTIVDDGTLEGRRGSLSV 308
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PT+CTTLIENG+LKGYMQD +NARLM M++TGN RRES+AH+P+PRMTNTYM G
Sbjct: 309 DDEGTPTECTTLIENGVLKGYMQDKLNARLMGMAVTGNGRRESYAHLPMPRMTNTYMRAG 368
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ P+EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKI+ PVKGATLIG+G
Sbjct: 369 ESDPQEIIASVKKGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKISAPVKGATLIGNG 428
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
P + +VSM+GND+ LD GVG CGKDGQ VPVGVGQPTLK+D+ITVGGT
Sbjct: 429 PEAMSRVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKLDAITVGGTG 478
>gi|421560075|ref|ZP_16005940.1| U62 family peptidase 2 TldD [Neisseria meningitidis 92045]
gi|402334160|gb|EJU69454.1| U62 family peptidase 2 TldD [Neisseria meningitidis 92045]
Length = 480
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 265/480 (55%), Positives = 350/480 (72%), Gaps = 4/480 (0%)
Query: 259 IHPLNIA-RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTG 317
+HP A ++ LLE L ++L K L + + VDYAD Y Q T E+W LEEGIVK+G
Sbjct: 1 MHPTYSAVQARLLEANRLSPELLAKSLCIIGAHHVDYADIYCQRTAYESWHLEEGIVKSG 60
Query: 318 NFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKI 377
+F INQGVGVRA+SGDKTAF Y+D + +++ + K+ R I + G +K
Sbjct: 61 SFQINQGVGVRAVSGDKTAFAYADSLCIDSINRSAKAVRVIG--AAGGETGVKVPTPAYG 118
Query: 378 NSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIV 437
++ D I+ ++ K+ LL +VE IA+ DPR+++V+A L+ EYD++ + R DG
Sbjct: 119 KPVHIAIDPIAGLDSAAKVALLNKVEAIAKAADPRIVQVMAGLTCEYDMVYLARLDGKHA 178
Query: 438 ADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAK 497
ADIRP+V+L VT+I ++ RRE G++G GGR + YF + ++ + V +V AL NLE++
Sbjct: 179 ADIRPMVRLNVTVIAKQGERREQGSAGGGGRCDLAYFDENLVRQFVDAAVKQALTNLESR 238
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
PAPAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+R+A+K +T+VD G
Sbjct: 239 PAPAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKGTSVFSGRIGERVAAKGVTVVDQGD 298
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
+A RRGS+NIDDEGN T+ T LIE+GIL GYMQD NARL TGN RRES+A P+P
Sbjct: 299 IAGRRGSLNIDDEGNETRRTVLIEDGILVGYMQDETNARLTGTQSTGNGRRESYASAPMP 358
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNT+M NG + PEEII+S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++ G++ YP
Sbjct: 359 RMTNTFMENGSYEPEEIIASIDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEGGRLQYP 418
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS-ITVGGT 736
VKGAT+IG+GP +LK VSMIGND LD GVGVCGK+GQ VPVGVGQPTL+ID+ +TVGG+
Sbjct: 419 VKGATIIGNGPEVLKHVSMIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAGLTVGGS 478
>gi|317494220|ref|ZP_07952636.1| TldD protein [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316917993|gb|EFV39336.1| TldD protein [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 481
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 270/474 (56%), Positives = 358/474 (75%), Gaps = 9/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL L + L +LG + + ++DYAD YFQ + +E+W++E+ I+K G+++I+QGVGVR
Sbjct: 10 LLAANKLSHQDLFSVLGTLAERQLDYADLYFQSSYHESWVIEDRIIKDGSYNIDQGVGVR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSLYSFTDTI 387
AISG+KT F Y+D I+ N L + ++ RSI Q NGK+ + NI + LY D +
Sbjct: 70 AISGEKTGFAYADQITLNALNQSAQAARSIVREQGNGKVHTLGNIPH---SLLYPAIDPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S+ EKI LL RV+ +AR +DPRV +V A+++G Y++IL+ DG + AD+RPLV+L
Sbjct: 127 QSLPREEKIALLHRVDNVARAEDPRVQEVSASITGVYELILVAATDGTLAADVRPLVRLS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLEAKPAPAG 502
V+++VE++GRRE G+SG GGR Y YF +M+ + +V AL+NL A APAG
Sbjct: 187 VSVLVEEDGRRERGSSGGGGRSGYEYFLEMVDGDVRADAFAKEAVRMALVNLSAVAAPAG 246
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+GT++ RR
Sbjct: 247 SMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGQLVASELCTVVDDGTISGRR 306
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+ IDDEG P Q LIENGILKG+MQD MNARLM ++ TGN RRES+AH+P+PRMTNT
Sbjct: 307 GSLAIDDEGVPGQYNVLIENGILKGFMQDKMNARLMGLAPTGNGRRESYAHLPMPRMTNT 366
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML GK P++IISSV+ GLYA NF+GGQVDIT+GKFVFS S+AY+I+NGKIT PVKGAT
Sbjct: 367 YMLAGKSTPQDIISSVEYGLYAPNFAGGQVDITSGKFVFSTSEAYLIENGKITKPVKGAT 426
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
LIG G ++++SM+GND+ LD GVGVCGK+GQ VPVGVGQPTLK+DS+TVGGT
Sbjct: 427 LIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSVPVGVGQPTLKLDSMTVGGT 480
>gi|330501865|ref|YP_004378734.1| C69 family peptidase [Pseudomonas mendocina NK-01]
gi|328916151|gb|AEB56982.1| peptidase U62, modulator of DNA gyrase [Pseudomonas mendocina
NK-01]
Length = 480
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 267/470 (56%), Positives = 351/470 (74%), Gaps = 3/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P +L L +LG + +D AD YFQ +E W+LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGNLTLDSLSAVLGEVAGPGIDAADLYFQSQVSETWVLEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ IS + L A ++ RSI+ G+ ++ +++ LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAISLDALTQAAQAARSISRA--GQQGRVQAFVSPQVSQLYADGNPLD 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ EK++LL+R+++ R DPR+ +V +L+G +D IL+ +DG + ADIRPLV+ V
Sbjct: 130 VMSRAEKVELLQRIDRATRALDPRIKQVTVSLAGVWDRILVAAHDGGLSADIRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVS-NSVNSALINLEAKPAPAGIMKVV 507
++IVE+NGRRE G G GGR +Y YF + + ++ AL+NLEA APAG M VV
Sbjct: 190 SVIVEQNGRRERGGHGGGGRTDYRYFLEEDRAMGYAREALRQALVNLEAIAAPAGSMPVV 249
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
+G GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+++AS TIVD+GTLA RRGS+++
Sbjct: 250 MGAGWSGVLLHEAVGHGLEGDFNRKGSSAYSGKVGQKVASSLCTIVDDGTLAGRRGSLSV 309
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PTQCTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML G
Sbjct: 310 DDEGTPTQCTTLIENGVLKGYMQDKLNARLMGVAATGNGRRESYAHLPMPRMTNTYMLAG 369
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ PEEII SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+G
Sbjct: 370 ESDPEEIIRSVKKGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGNG 429
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
P + +VSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 430 PEAMSRVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|429102905|ref|ZP_19164879.1| TldD protein, part of proposed TldE/TldD proteolytic complex (PMID
12029038) [Cronobacter turicensis 564]
gi|426289554|emb|CCJ90992.1| TldD protein, part of proposed TldE/TldD proteolytic complex (PMID
12029038) [Cronobacter turicensis 564]
Length = 481
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 266/481 (55%), Positives = 358/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG +++ ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLSANGLSHQDLFSILGQLYERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSL 380
+QGVGVRAISG+KT F Y+D IS L + ++ RSI Q G+IK + ++ + L
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARSIVREQGEGRIKTLSGVE---YSPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+ AR D RV +V A+L+G Y++IL+ DG + AD+
Sbjct: 120 YTTLDPLQSMSREEKLDILRRVDNAARAADKRVQEVSASLTGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTD-----MILEKCVSNSVNSALINLE 495
RPLV+L V++ VE++G+RE G+SG GGR+ Y +F + + E +V AL+NL
Sbjct: 180 RPLVRLSVSVQVEEDGKRERGSSGGGGRFGYQWFMENTDGEVRAEAWAREAVRMALVNLN 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGQLVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTLANRRGS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTLANRRGSLAIDDEGVPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SVK G++A NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLAGKSTPQEIIESVKYGIFAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KPVKGATLIGSGIEAMQQISMVGNDVKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|238764598|ref|ZP_04625544.1| Protein tldD [Yersinia kristensenii ATCC 33638]
gi|238697188|gb|EEP89959.1| Protein tldD [Yersinia kristensenii ATCC 33638]
Length = 484
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 268/484 (55%), Positives = 355/484 (73%), Gaps = 9/484 (1%)
Query: 259 IHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGN 318
I L+ LL L+ + L +LG + + ++DYAD YFQ + +E W+LE+ I+K G+
Sbjct: 3 IMSLSFVSEQLLAANKLNHQDLFSVLGQLAERRLDYADLYFQSSYHEAWVLEDSIIKDGS 62
Query: 319 FSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKI 377
++I+QGVGVRA+SG+KT F Y+D I+ N L + + RSI + NGK+ + I
Sbjct: 63 YNIDQGVGVRAVSGEKTGFAYADQITLNALQQSAHAARSIVRDTGNGKVHTLGEISH--- 119
Query: 378 NSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIV 437
+LY D + S++ +KI LL RV+K+AR D RV +V A+L+G Y+ IL+ DG +
Sbjct: 120 QALYPLLDPLQSLSREDKIALLHRVDKVARAADKRVQEVSASLTGVYEQILVAATDGTLA 179
Query: 438 ADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALI 492
AD+RPLV+L V+++VE NG+RE G SG GGR+ Y+YF + + + + +V AL+
Sbjct: 180 ADVRPLVRLSVSVLVEDNGKRERGASGGGGRFGYDYFLETVDGEVRADNFANEAVRMALV 239
Query: 493 NLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITI 552
NL A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+GSS FS +GK +AS+ T+
Sbjct: 240 NLSAVAAPAGAMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGSSVFSGQMGKLVASELCTV 299
Query: 553 VDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFA 612
VD+GT+ RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+A
Sbjct: 300 VDDGTMQGRRGSLAIDDEGVPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYA 359
Query: 613 HIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNG 672
H+P+PRMTNTYML GK PEEII+SV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+ G
Sbjct: 360 HLPMPRMTNTYMLAGKSTPEEIIASVEYGLYAPNFGGGQVDITSGKFVFSTSEAYLIEKG 419
Query: 673 KITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSIT 732
KIT+ VKGATLIG G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK+D++T
Sbjct: 420 KITHAVKGATLIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLDNLT 479
Query: 733 VGGT 736
VGGT
Sbjct: 480 VGGT 483
>gi|254253180|ref|ZP_04946498.1| hypothetical protein BDAG_02432 [Burkholderia dolosa AUO158]
gi|124895789|gb|EAY69669.1| hypothetical protein BDAG_02432 [Burkholderia dolosa AUO158]
Length = 433
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 260/382 (68%), Positives = 324/382 (84%), Gaps = 2/382 (0%)
Query: 357 SIANQSNG--KIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVI 414
+IA G K+K ++K I LY +D ++S++ K+KLLER+E++AR +DPR+
Sbjct: 51 AIAAAGGGRQKVKAATSLKGIAGRDLYLPSDPLASLDATAKVKLLERIEQMARSRDPRIT 110
Query: 415 KVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF 474
+V+A L+GEYDV+L+ R+DG + ADIRPLV++ VT+I E+NGRREIG+ G GGR++Y YF
Sbjct: 111 QVMAGLAGEYDVVLVARSDGALAADIRPLVRVSVTVIAEQNGRREIGSGGGGGRFDYGYF 170
Query: 475 TDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGS 534
TD +L + V ++V++AL+NL+A+PAPAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGS
Sbjct: 171 TDDVLSRYVDDAVHAALVNLDARPAPAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGS 230
Query: 535 SAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMN 594
SAF+ IG+++A+K +T+VD+GTL NRRGS+NIDDEGNPTQCTTLIE+GILKGY+QD +N
Sbjct: 231 SAFAGRIGEQVAAKGVTVVDDGTLPNRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDTLN 290
Query: 595 ARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDI 654
ARLM M +TGNARRES+A +P+PRMTNTYMLNG P+EII+SVKNGLYA NF GGQVDI
Sbjct: 291 ARLMKMPVTGNARRESYAALPMPRMTNTYMLNGDKDPQEIIASVKNGLYAVNFGGGQVDI 350
Query: 655 TNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDG 714
TNGKFVFSAS+AY+I+NGK+TYPVKGATLIG GP LK VSMIGNDM LD GVGVCGK+G
Sbjct: 351 TNGKFVFSASEAYMIENGKVTYPVKGATLIGSGPESLKYVSMIGNDMSLDTGVGVCGKEG 410
Query: 715 QMVPVGVGQPTLKIDSITVGGT 736
Q VPVGVGQPTL+ID +TVGGT
Sbjct: 411 QSVPVGVGQPTLRIDKMTVGGT 432
>gi|332163140|ref|YP_004299717.1| protease TldD [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|325667370|gb|ADZ44014.1| protease TldD [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
Length = 481
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 267/481 (55%), Positives = 355/481 (73%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L+ LL L+ + L +LG + + ++DYAD YFQ + +E W+LE+ I+K G+++I
Sbjct: 3 LSFVSEQLLAANKLNHQDLFSVLGQLAERRLDYADLYFQSSYHEAWVLEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D I+ N L + + RSI NGK+ + I+ +L
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQITLNALQQSAHAARSIVRDIGNGKVHTLGEIRH---QAL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y D + S++ +KI LL RV+K+AR D RV +V A+L+G Y+ IL+ DG + AD+
Sbjct: 120 YPLLDPLQSLSREDKIALLHRVDKVARAADKRVQEVSASLTGVYEQILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLE 495
RPLV+L V+++VE+NG+RE G SG GGR+ Y+YF + + + + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEENGKRERGASGGGGRFGYDYFLETVDGEVRADSFANEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+GSS FS +GK +AS+ T+VD+
Sbjct: 240 AIAAPAGAMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGSSVFSGQMGKLVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTL RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTLQGRRGSLAIDDEGMPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK PEEII+SV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+ G+IT
Sbjct: 360 MPRMTNTYMLAGKSTPEEIIASVEYGLYAPNFGGGQVDITSGKFVFSTSEAYLIEKGQIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
+ VKGATLIG G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 HAVKGATLIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|300721798|ref|YP_003711076.1| maturation of Microcin B17 and degradation of CcdA protein
[Xenorhabdus nematophila ATCC 19061]
gi|297628293|emb|CBJ88854.1| putative enzyme for maturation of Microcin B17 and degradation of
CcdA with winged helix domain [Xenorhabdus nematophila
ATCC 19061]
Length = 482
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 270/474 (56%), Positives = 355/474 (74%), Gaps = 9/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL +L+ + L +LG + + ++DYAD YFQ + +E W+LE+ I+K G+++I+QGVGVR
Sbjct: 10 LLAANNLNHQDLFSVLGQLAERRLDYADLYFQSSYHETWVLEDRIIKDGSYNIDQGVGVR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
A+SG+KT F Y+D I+ N L + + RSI ++ NG I + + +LYS D +
Sbjct: 70 AVSGEKTGFAYADQITLNALQQSALAARSIVQEAGNG---IAHTLGAVTHKALYSAVDPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S++ EKI LL RV+ IAR +DPRV +V A+LSG Y+ +L+ DG + ADIRPLV+L
Sbjct: 127 QSMSREEKIALLHRVDLIARAEDPRVQEVNASLSGVYEQVLVAATDGTLAADIRPLVRLS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEAKPAPAG 502
V+++VE++G+RE G SG G RY Y YF ++ E+ +V+ ALINL A APAG
Sbjct: 187 VSVLVEEDGKRERGGSGGGARYGYEYFLQTEDGQVLAEQFAREAVHMALINLSAVAAPAG 246
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG+++AS+ T+VD+GT+ RR
Sbjct: 247 TMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQIGQKVASELCTVVDDGTIEGRR 306
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNT
Sbjct: 307 GSLAIDDEGVPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNT 366
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML G PE+II+SV GLYA NF GGQVDIT+GKFVFS S+AY+I+NGKIT PVKGAT
Sbjct: 367 YMLAGNSTPEDIIASVDRGLYAPNFGGGQVDITSGKFVFSTSEAYLIENGKITQPVKGAT 426
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
LIG G ++++SM+GND+ LD GVGVCGK+GQ VPVGVGQPTLK+D++TVGGT
Sbjct: 427 LIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSVPVGVGQPTLKLDNLTVGGT 480
>gi|329118089|ref|ZP_08246801.1| acid phosphatase SurE [Neisseria bacilliformis ATCC BAA-1200]
gi|327465749|gb|EGF12022.1| acid phosphatase SurE [Neisseria bacilliformis ATCC BAA-1200]
Length = 496
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 261/486 (53%), Positives = 344/486 (70%), Gaps = 10/486 (2%)
Query: 261 PLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFS 320
P R LL LD + L + L + VDYAD Y Q T E+W LEEG+VK+G+F
Sbjct: 6 PSRTVRQDLLAANGLDAEELARSLALIGACHVDYADIYCQRTAFESWHLEEGMVKSGSFQ 65
Query: 321 INQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA--------NQSNGKIKIIKNI 372
I+QG GVRA+SG+KTAF Y+D + + + ++ R+I + + K N
Sbjct: 66 IDQGAGVRAVSGEKTAFAYTDSLDADGIRRCAQTVRAIGAAGRDTRMERPSEKFSDGLNG 125
Query: 373 KKIK-INSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ K +++ + I S++ K+ LL+R+E +A+ DPR+++V+A L+ EYD+I I R
Sbjct: 126 RGAKNAPRVHTAANPIHSMDAAAKVALLQRIETLAKAADPRIVQVMAGLTCEYDLIYIAR 185
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
DG ADIRPLV+L VT+I ++ RRE+G++G GGRY+ +F + V +V AL
Sbjct: 186 LDGRHAADIRPLVRLSVTVIAKQGERREMGSAGGGGRYDLAFFDGQRVRGYVDTAVAQAL 245
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
NLEA+PAPAG M VVL GWPG+LLHEA+GHGLEGDFNRK +SAFS IG+R+A+K +T
Sbjct: 246 TNLEARPAPAGAMSVVLAGGWPGVLLHEAVGHGLEGDFNRKQTSAFSGRIGQRVAAKGVT 305
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
++D G +A RRGS+N DDEGN T+ T LIE+GIL GYMQD NARL ITGN RRES+
Sbjct: 306 VIDQGDIAGRRGSLNTDDEGNETRRTVLIEDGILAGYMQDETNARLTGAQITGNGRRESY 365
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A P+PRMTNT+M NG PEEII+S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++N
Sbjct: 366 AAAPMPRMTNTFMENGTHDPEEIIASLDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEN 425
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS- 730
G++ YPVKGAT+IG+GP +LK VSMIGND LD G+GVCGKDGQ VPVGVGQPTL+ID+
Sbjct: 426 GRLQYPVKGATIIGNGPEVLKHVSMIGNDTTLDSGIGVCGKDGQSVPVGVGQPTLRIDAG 485
Query: 731 ITVGGT 736
+TVGG+
Sbjct: 486 LTVGGS 491
>gi|386310150|ref|YP_006006206.1| TldD protein [Yersinia enterocolitica subsp. palearctica Y11]
gi|418242222|ref|ZP_12868737.1| protease TldD [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
gi|433550763|ref|ZP_20506806.1| TldD protein, part of proposed TldE/TldD proteolytic complex
[Yersinia enterocolitica IP 10393]
gi|318603976|emb|CBY25474.1| tldd protein, part of proposed TldE/TldD proteolytic complex (PMID
12029038) [Yersinia enterocolitica subsp. palearctica
Y11]
gi|330862860|emb|CBX73001.1| protein tldD [Yersinia enterocolitica W22703]
gi|351778359|gb|EHB20518.1| protease TldD [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
gi|431787862|emb|CCO69846.1| TldD protein, part of proposed TldE/TldD proteolytic complex
[Yersinia enterocolitica IP 10393]
Length = 481
Score = 537 bits (1383), Expect = e-150, Method: Compositional matrix adjust.
Identities = 267/481 (55%), Positives = 355/481 (73%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L+ LL L+ + L +LG + + ++DYAD YFQ + +E W+LE+ I+K G+++I
Sbjct: 3 LSFVSEQLLAANKLNHQDLFSVLGQLAERRLDYADLYFQSSYHEAWVLEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D I+ N L + + RSI NGK+ + I+ +L
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQITLNALQQSAHAARSIVRDIGNGKVHTLGEIRH---QAL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y D + S++ +KI LL RV+K+AR D RV +V A+L+G Y+ IL+ DG + AD+
Sbjct: 120 YPLLDPLQSLSREDKIALLHRVDKVARAADKRVQEVSASLTGVYEQILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLE 495
RPLV+L V+++VE+NG+RE G SG GGR+ Y+YF + + + + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEENGKRERGASGGGGRFGYDYFLETVDGEVRADSFANEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+GSS FS +GK +AS+ T+VD+
Sbjct: 240 AIAAPAGAMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGSSVFSGQMGKLVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTL RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTLQGRRGSLAIDDEGVPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK PEEII+SV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+ G+IT
Sbjct: 360 MPRMTNTYMLAGKSTPEEIIASVEYGLYAPNFGGGQVDITSGKFVFSTSEAYLIEKGQIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
+ VKGATLIG G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 HAVKGATLIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|260596138|ref|YP_003208709.1| protease TldD [Cronobacter turicensis z3032]
gi|260215315|emb|CBA27275.1| Protein tldD [Cronobacter turicensis z3032]
Length = 481
Score = 536 bits (1382), Expect = e-149, Method: Compositional matrix adjust.
Identities = 265/481 (55%), Positives = 358/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG +++ ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLSANGLSHQDLFSILGQLYERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSL 380
+QGVGVRAISG+KT F Y+D IS L + ++ RSI Q G+IK + ++ + L
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARSIVREQGEGRIKTLSGVE---YSPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+ AR D RV +V A+L+G Y++IL+ DG + AD+
Sbjct: 120 YTTLDPLQSMSREEKLDILRRVDNAARAADKRVQEVSASLTGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTD-----MILEKCVSNSVNSALINLE 495
RPLV+L V++ VE++G+RE G+SG GGR+ Y +F + + E +V AL+NL
Sbjct: 180 RPLVRLSVSVQVEEDGKRERGSSGGGGRFGYQWFMENTDGEVRAEAWAREAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGQLVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTLANRRGS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTLANRRGSLAIDDEGVPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV+ G++A NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLAGKSTPQEIIESVEYGIFAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KPVKGATLIGSGIEAMQQISMVGNDVKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|381393344|ref|ZP_09919067.1| TldD protein [Glaciecola punicea DSM 14233 = ACAM 611]
gi|379330902|dbj|GAB54200.1| TldD protein [Glaciecola punicea DSM 14233 = ACAM 611]
Length = 481
Score = 536 bits (1382), Expect = e-149, Method: Compositional matrix adjust.
Identities = 253/474 (53%), Positives = 348/474 (73%), Gaps = 8/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL LD++ L ++L + K+D+AD YFQ +++E+W+LE+GI+K G+++I +GVGVR
Sbjct: 9 LLSQSGLDQQNLTQLLDLILDYKIDFADLYFQLSQHESWVLEDGIIKDGSYNIERGVGVR 68
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
AI+G++T F YSD+IS L A K++RSIA +G+ + +LY+ ++ +
Sbjct: 69 AITGEQTGFAYSDEISLKALQEACKASRSIAK--SGRKVSVTGFTSSSNKALYTSSNPLL 126
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
+ +K+ +L+RV+ RLK P +V +L+G Y+ ILI DG DIRPL++L
Sbjct: 127 KMTDADKVDILKRVDSYTRLKAPEASQVSVSLTGVYEEILIAATDGTFATDIRPLIRLNC 186
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMI------LEKCVSNSVNSALINLEAKPAPAG 502
++++EK+G+RE G+SG GGR Y++F I E+ +++ A +NL A APAG
Sbjct: 187 SVLLEKDGKRERGSSGAGGRRTYDFFEQTIESGQLRYEQIADQAIHMARVNLNAIAAPAG 246
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS +GK++AS+ +T++D+GT+ +RR
Sbjct: 247 AMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGASTFSGRMGKQVASRGVTVIDDGTMDDRR 306
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS++IDDEG PTQ LIE+GIL GYMQD NA LM + TGN RRES+AH+P+PRMTNT
Sbjct: 307 GSLSIDDEGTPTQRNVLIEDGILTGYMQDKHNAGLMGVKPTGNGRRESYAHLPMPRMTNT 366
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML G+ P++II SV G+YA NF GGQVDIT+GKFVFS S+AY+I+ GKIT+ +KGAT
Sbjct: 367 YMLGGEHSPQDIIGSVDKGIYAPNFGGGQVDITSGKFVFSTSEAYLIEKGKITHAIKGAT 426
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
LIG+GP ++K+SMIGND+ LD GVGVCGKDGQ VPVGVGQPTLK+D +TVGGT
Sbjct: 427 LIGNGPESMQKISMIGNDLALDAGVGVCGKDGQSVPVGVGQPTLKVDQMTVGGT 480
>gi|429091495|ref|ZP_19154163.1| TldD protein, part of proposed TldE/TldD proteolytic complex (PMID
12029038) [Cronobacter dublinensis 1210]
gi|426743825|emb|CCJ80276.1| TldD protein, part of proposed TldE/TldD proteolytic complex (PMID
12029038) [Cronobacter dublinensis 1210]
Length = 481
Score = 536 bits (1382), Expect = e-149, Method: Compositional matrix adjust.
Identities = 263/481 (54%), Positives = 357/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG +++ ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLSANGLSHQDLFSILGQLYERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D IS +L + ++ RSI Q G+IK + ++ + L
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQISLESLTQSAQAARSIVREQGEGRIK---TLSAVEYSPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+ AR D RV +V A+L+G Y++IL+ DG + AD+
Sbjct: 120 YTTLDPLQSLSREEKLDILRRVDNAARAADKRVQEVSASLTGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTD-----MILEKCVSNSVNSALINLE 495
RPLV+L V++ VE +G+RE G+SG GGR+ Y +F + + E +V AL+NL
Sbjct: 180 RPLVRLSVSVQVEDDGKRERGSSGGGGRFGYEWFMEDTDGEVRAEAWAREAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGQLVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTLANRRGS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTLANRRGSLAIDDEGVPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV+ G++A NF GGQVDIT+GKFVFS S+AY+I+ GK+T
Sbjct: 360 MPRMTNTYMLAGKSTPQEIIESVEYGIFAPNFGGGQVDITSGKFVFSTSEAYLIEKGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KPVKGATLIGSGIEAMQQISMVGNDVKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|206579470|ref|YP_002236342.1| protease TldD [Klebsiella pneumoniae 342]
gi|288933329|ref|YP_003437388.1| peptidase U62 modulator of DNA gyrase [Klebsiella variicola At-22]
gi|290511621|ref|ZP_06550990.1| TldD protein [Klebsiella sp. 1_1_55]
gi|206568528|gb|ACI10304.1| protein TldD [Klebsiella pneumoniae 342]
gi|288888058|gb|ADC56376.1| peptidase U62 modulator of DNA gyrase [Klebsiella variicola At-22]
gi|289776614|gb|EFD84613.1| TldD protein [Klebsiella sp. 1_1_55]
Length = 481
Score = 536 bits (1382), Expect = e-149, Method: Compositional matrix adjust.
Identities = 260/481 (54%), Positives = 361/481 (75%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L+ + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLSANGLNHQDLFAILGQLTERRLDYGDLYFQSSYHESWVLEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D ISK L + ++ R+I + NGK++ + ++ + L
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQISKLALEQSAQAARTIVRDTGNGKVQ---TLGAVEYSPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTSIDPLQSMSREEKLDILRRVDKVARAADKRVQEVSASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE++G+RE G+SG GGR+ Y+YF D+ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEEDGKRERGSSGGGGRFGYDYFLASQEGDVRADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG++ VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGMLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGHMGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTIVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G+ P+EII SV G++A NF GGQVDIT+GKFVFS S+AY+I+ GK+T
Sbjct: 360 MPRMTNTYMLAGQSTPQEIIESVDYGIFAPNFGGGQVDITSGKFVFSTSEAYLIEKGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
VKGATLIG G ++++SM+GND++LD GVGVCGK+GQ VPVGVGQPTLK+D++TVGG
Sbjct: 420 KAVKGATLIGSGIETMQQISMVGNDLRLDNGVGVCGKEGQSVPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|386744141|ref|YP_006217320.1| protease TldD [Providencia stuartii MRSN 2154]
gi|384480834|gb|AFH94629.1| protease TldD [Providencia stuartii MRSN 2154]
Length = 481
Score = 536 bits (1382), Expect = e-149, Method: Compositional matrix adjust.
Identities = 275/474 (58%), Positives = 355/474 (74%), Gaps = 9/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL LD + L LG + + K+DYAD YFQ + +E W+LE+ I+K G+++I+QGVGVR
Sbjct: 10 LLAANGLDHQKLYDTLGLLSERKIDYADLYFQSSYHEAWVLEDRIIKDGSYNIDQGVGVR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSI-ANQSNGKIKIIKNIKKIKINSLYSFTDTI 387
AISG+KT F Y+D +S L + + RSI + Q NGK +I+ + K LYS TD +
Sbjct: 70 AISGEKTGFAYADQVSLMALQQSATAARSIVSEQGNGKSQILTEVGYKK---LYSETDPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S++ +KI LL R++++AR +DPRVI+V A+L+G Y+ +L+ DG + ADIRPLV+L
Sbjct: 127 QSLSREDKIALLHRIDQVARAEDPRVIEVNASLTGVYEQVLVAATDGTLAADIRPLVRLS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYFTDM-----ILEKCVSNSVNSALINLEAKPAPAG 502
V+++VE G+RE G SG GGRY Y YF ++ + E+ +V AL+NL A APAG
Sbjct: 187 VSVLVEHEGKRERGASGGGGRYGYEYFLEIHQGQVLAEQYAKEAVRMALVNLSAIAAPAG 246
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
+M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG+ +AS T+VD+GT+A RR
Sbjct: 247 MMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQIGELVASPLCTVVDDGTIAGRR 306
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+ IDDEG P Q LIENGILK YMQD +NARLM ++ TGNARRES+AH+P+PRMTNT
Sbjct: 307 GSLAIDDEGVPGQYNVLIENGILKNYMQDKLNARLMGVAPTGNARRESYAHLPMPRMTNT 366
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML G PEEIISSV G+YA NF GGQVDIT+GKFVFS S+AY+I+NGKIT PVKGAT
Sbjct: 367 YMLPGTSTPEEIISSVDKGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKITSPVKGAT 426
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
LIG G ++++SM+GND+ LD GVGVCGK+GQ VPVGVGQPTLK+D +TVGGT
Sbjct: 427 LIGSGVEAMQQISMVGNDLALDKGVGVCGKEGQSVPVGVGQPTLKLDKMTVGGT 480
>gi|399522100|ref|ZP_10762765.1| peptidase U62, modulator of DNA gyrase [Pseudomonas
pseudoalcaligenes CECT 5344]
gi|399110135|emb|CCH39325.1| peptidase U62, modulator of DNA gyrase [Pseudomonas
pseudoalcaligenes CECT 5344]
Length = 480
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 266/470 (56%), Positives = 349/470 (74%), Gaps = 3/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P +L L +LG++ +D AD YFQ +E W+LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGNLTFDSLSSVLGDVAGPGIDAADLYFQSQVSETWVLEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ IS + L A ++ RSI+ G+ ++ ++ LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAISLDALTQAARAARSISRA--GQQGRVQAFVSPQVTQLYAEGNPLD 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
+ EK++LL+R+++ R DPR+ +V +L+G +D IL+ +DG + AD RPLV+ V
Sbjct: 130 VMGRAEKVELLQRIDRATRALDPRIKQVTVSLAGVWDRILVAAHDGSLSADFRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVS-NSVNSALINLEAKPAPAGIMKVV 507
++IVE+NGRRE G G GGR +Y YF + + ++ AL+NLEA APAG M VV
Sbjct: 190 SVIVEQNGRRERGGHGGGGRTDYRYFLEEDRAMGYAREALRQALVNLEAIAAPAGSMPVV 249
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
+G GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+++AS TIVD+GTLA RRGS+++
Sbjct: 250 MGAGWSGVLLHEAVGHGLEGDFNRKGSSAYSGQVGQKVASSLCTIVDDGTLAGRRGSLSV 309
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PTQCTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML G
Sbjct: 310 DDEGTPTQCTTLIENGVLKGYMQDKLNARLMGVAATGNGRRESYAHLPMPRMTNTYMLAG 369
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ PEEII SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+G
Sbjct: 370 ESDPEEIIRSVKKGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGNG 429
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
P + +VSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 430 PEAMSRVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|365838597|ref|ZP_09379935.1| TldD/PmbA family protein [Hafnia alvei ATCC 51873]
gi|364559390|gb|EHM37373.1| TldD/PmbA family protein [Hafnia alvei ATCC 51873]
Length = 481
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 269/474 (56%), Positives = 358/474 (75%), Gaps = 9/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL L + L +LG + + ++DYAD YFQ + +E+W++E+ I+K G+++I+QGVGVR
Sbjct: 10 LLAANKLSHQDLFSVLGTLAERQLDYADLYFQSSYHESWVIEDRIIKDGSYNIDQGVGVR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSLYSFTDTI 387
AISG+KT F Y+D I+ N L + ++ RSI Q NGK+ + NI + LY D +
Sbjct: 70 AISGEKTGFAYADQITLNALNQSAQAARSIVREQGNGKVHTLGNIPH---SLLYPAIDPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S+ EKI LL RV+ +AR +DPRV +V A+++G Y++IL+ DG + AD+RPLV+L
Sbjct: 127 QSLPREEKIALLHRVDNVARAEDPRVQEVSASITGVYELILVAATDGTLAADVRPLVRLS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLEAKPAPAG 502
V+++VE++GRRE G+SG GGR Y YF +++ + +V AL+NL A APAG
Sbjct: 187 VSVLVEEDGRRERGSSGGGGRSGYEYFLELVDGDVRADAFAKEAVRMALVNLSAVAAPAG 246
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+GT++ RR
Sbjct: 247 SMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGQLVASELCTVVDDGTISGRR 306
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+ IDDEG P Q LIENGILKG+MQD MNARLM ++ TGN RRES+AH+P+PRMTNT
Sbjct: 307 GSLAIDDEGVPGQYNVLIENGILKGFMQDKMNARLMGLAPTGNGRRESYAHLPMPRMTNT 366
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML GK P++IISSV+ GLYA NF+GGQVDIT+GKFVFS S+AY+I+NGKIT PVKGAT
Sbjct: 367 YMLAGKSTPQDIISSVEYGLYAPNFAGGQVDITSGKFVFSTSEAYLIENGKITKPVKGAT 426
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
LIG G ++++SM+GND+ LD GVGVCGK+GQ VPVGVGQPTLK+DS+TVGGT
Sbjct: 427 LIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSVPVGVGQPTLKLDSMTVGGT 480
>gi|317049777|ref|YP_004117425.1| peptidase U62 modulator of DNA gyrase [Pantoea sp. At-9b]
gi|316951394|gb|ADU70869.1| peptidase U62 modulator of DNA gyrase [Pantoea sp. At-9b]
Length = 481
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 257/482 (53%), Positives = 351/482 (72%), Gaps = 11/482 (2%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL ++++ L +LG + + ++DYAD YFQ + +E+W+LE+ I+K G++ I
Sbjct: 3 LNLVSEQLLTANSINQQDLFSLLGQLSERRLDYADLYFQSSFHESWVLEDKIIKDGSYHI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKIN-S 379
+QGVGVRA+SG+KT F Y+D I+ N L + ++ RSI Q NGK + + IN S
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQITLNALRQSAEAARSIVREQGNGKAHTLSAV----INRS 118
Query: 380 LYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVAD 439
LY+ + + S+ +KI LL RV+ +AR DPRV +V A+L+G Y+ +L+ DG + AD
Sbjct: 119 LYAPVNPLDSLTREDKIALLHRVDNVARAADPRVQEVNASLTGVYEQVLVAATDGTLAAD 178
Query: 440 IRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINL 494
+RPLV+L +++ VE G+RE G+SG G R Y +F ++ + +V AL+NL
Sbjct: 179 VRPLVRLSISVQVEDQGKRERGSSGGGARTGYEFFLADESGEVRADAWAREAVRMALVNL 238
Query: 495 EAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVD 554
A APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+ +S FS +G+ +AS+ T+VD
Sbjct: 239 SAVAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRATSVFSGKMGQLVASELCTVVD 298
Query: 555 NGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHI 614
+GT+ RGS+ +DDEG P Q LIENG+LKGYMQD +NARLM ++ TGN RRES+AH+
Sbjct: 299 DGTIEGLRGSLAVDDEGVPGQYNVLIENGVLKGYMQDKLNARLMGVNPTGNGRRESYAHL 358
Query: 615 PIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKI 674
P+PRMTNTYML GK P++II+SV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+NGK+
Sbjct: 359 PMPRMTNTYMLAGKSTPQDIIASVEYGLYAPNFGGGQVDITSGKFVFSTSEAYLIENGKV 418
Query: 675 TYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVG 734
T PVKGATLIG G ++++SM+GND+ LD GVGVCGK+GQ VPVGVGQPTLK+D +TVG
Sbjct: 419 TKPVKGATLIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSVPVGVGQPTLKLDKLTVG 478
Query: 735 GT 736
GT
Sbjct: 479 GT 480
>gi|118602274|ref|YP_903489.1| peptidase U62, modulator of DNA gyrase [Candidatus Ruthia magnifica
str. Cm (Calyptogena magnifica)]
gi|118567213|gb|ABL02018.1| microcin-processing peptidase 2, Unknown type peptidase, MEROPS
family U62 [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 474
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 263/469 (56%), Positives = 349/469 (74%), Gaps = 4/469 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL+ L+++ + +L ++ DYAD YFQ + E+W LEE IVK+G + I+ GVG R
Sbjct: 5 LLDDHRLNQEKITILLSSLAAKGTDYADLYFQHSAVESWFLEESIVKSGTYHISHGVGAR 64
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+S D+T F YSDD++ + A+ + I+ Q+ + I+ + I + Y+ ++ +S
Sbjct: 65 AVSSDQTGFAYSDDLNIKAIEKAISFAKGISTQTG--TRRIQAFQSIPQVARYNGSNPLS 122
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
S + +EK+ L+R++ + R K+P+V +V A +SG + +LI DG+ D RP+V++ V
Sbjct: 123 SFSSQEKVNFLKRIDILGR-KEPKVKQVSALISGGFSEVLIASTDGVFAKDYRPMVRVSV 181
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKC-VSNSVNSALINLEAKPAPAGIMKVV 507
+IIVE NGR E +SG GGRYNY YF D L++ V+ ++ AL+ LE+K APAG M V+
Sbjct: 182 SIIVEHNGRTESASSGGGGRYNYRYFIDHALDEIYVNEAIRQALVALESKKAPAGNMPVI 241
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LGPGWPG+LLHEAIGHGLEGDFNRK SS F+N IG+++AS + TIVDNGTL NRRGS+ I
Sbjct: 242 LGPGWPGVLLHEAIGHGLEGDFNRKKSSIFTNRIGEQVASDKCTIVDNGTLENRRGSLTI 301
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PTQ T LIENGILKGY+ D MNA+LMN TGN RRES+AHIPIPRMTNTYMLNG
Sbjct: 302 DDEGIPTQNTLLIENGILKGYLFDKMNAKLMNTVSTGNGRRESYAHIPIPRMTNTYMLNG 361
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ + +I+SV NG+YA NF GGQV+IT+GKFVFSA++AY+IKNGKI +P+KG TL+G G
Sbjct: 362 QDSLKNMITSVDNGIYAVNFDGGQVNITSGKFVFSANEAYLIKNGKIMHPIKGVTLVGSG 421
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
+LKK+SM+ ND+KLD GVGVCGKDGQ VPVGVGQP+LKID +TVGGT
Sbjct: 422 AEVLKKISMVANDLKLDNGVGVCGKDGQNVPVGVGQPSLKIDQLTVGGT 470
>gi|307129049|ref|YP_003881065.1| TldD protein [Dickeya dadantii 3937]
gi|306526578|gb|ADM96508.1| TldD protein [Dickeya dadantii 3937]
Length = 481
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 264/474 (55%), Positives = 349/474 (73%), Gaps = 9/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL L + L +LG + + ++DYAD YFQ + +E+W+LE+ I+K G++ I+QGVG+R
Sbjct: 10 LLTANKLSHQDLQSVLGTLSERRIDYADLYFQSSYHESWVLEDRIIKDGSYHIDQGVGIR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSLYSFTDTI 387
AI+G+KT F Y+D I+ N L + ++ RSI Q NG +K + + LY + +
Sbjct: 70 AINGEKTGFAYADQITLNALQQSAQAARSIVREQGNGAVKTLGEVPH---RGLYPQANPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S+ EKI LL+RV+ AR D RV +V A+L+G Y++IL+ DG + AD+RPLV+L
Sbjct: 127 DSLTREEKIALLQRVDATARAADARVQEVTASLTGVYELILVAATDGTLAADVRPLVRLS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEAKPAPAG 502
V+++VE++GRRE G+SG G R Y+YF ++ E +V AL+NL A APAG
Sbjct: 187 VSVLVEEDGRRERGSSGGGARTGYDYFWQQADGEVRAEAWAKEAVRMALVNLSAVAAPAG 246
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +GK +AS+ T+VD+GTL RR
Sbjct: 247 SMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGKLVASELCTVVDDGTLEGRR 306
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+ +DDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNT
Sbjct: 307 GSLAVDDEGVPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNT 366
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML GK PEEII+SV GLYA NF GGQVDIT+GKFVFS S+AY+I+NG++T PVKGAT
Sbjct: 367 YMLAGKSTPEEIIASVDYGLYAPNFGGGQVDITSGKFVFSTSEAYLIENGRVTKPVKGAT 426
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
LIG G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK+D+ITVGGT
Sbjct: 427 LIGSGIEAMQQISMVGNDLALDRGVGVCGKEGQSLPVGVGQPTLKLDNITVGGT 480
>gi|238797929|ref|ZP_04641420.1| Protein tldD [Yersinia mollaretii ATCC 43969]
gi|238718234|gb|EEQ10059.1| Protein tldD [Yersinia mollaretii ATCC 43969]
Length = 481
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 266/481 (55%), Positives = 356/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L+ LL L+ + L +LG + + ++DYAD YFQ + +E W+LE+ I+K G+++I
Sbjct: 3 LSFVSEQLLAANKLNHQDLFSVLGQLAERRLDYADLYFQSSYHEAWVLEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D I+ N L + + RSI +S NGK+ + ++ +L
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQITLNALQQSAHAARSIVRESGNGKVH---TLGEVPYQAL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y D + S++ +KI LL RV+K+AR D RV +V A+L+G Y+ +L+ DG + AD+
Sbjct: 120 YPLLDPLQSLSREDKIALLHRVDKVARAADKRVQEVSASLTGIYEQVLVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLE 495
RPLV+L V+++VE +G+RE G SG GGR+ Y+YF +M+ + + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEDDGKRERGASGGGGRFGYDYFLEMVDGEVRADNFANEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+GSS FS +GK +AS+ T+VD+
Sbjct: 240 AIAAPAGAMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGSSVFSGQLGKLVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTL RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTLQGRRGSLAIDDEGVPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK PEEII+SV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+ G+IT
Sbjct: 360 MPRMTNTYMLAGKSTPEEIIASVEYGLYAPNFGGGQVDITSGKFVFSTSEAYLIEKGQIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
VKGATLIG G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 RAVKGATLIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|397163464|ref|ZP_10486927.1| modulator of DNA gyrase family protein [Enterobacter radicincitans
DSM 16656]
gi|396094930|gb|EJI92477.1| modulator of DNA gyrase family protein [Enterobacter radicincitans
DSM 16656]
Length = 481
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 261/481 (54%), Positives = 356/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLSHQDLFAILGQLTARRLDYGDLYFQSSYHESWVLEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D IS L + ++ R+I + +GK+K + ++ +L
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQISLLALEQSAQAARTIVREDGDGKVKTLGAVEH---TAL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+L+G Y++IL+ DG + AD+
Sbjct: 120 YTSLDPLQSMSREEKLDILRRVDKVARAADRRVQEVTASLTGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V++ VE++G+RE G+SG GGR+ Y++F D+ + +V AL+NL
Sbjct: 180 RPLVRLSVSVQVEEDGKRERGSSGGGGRFGYDWFLQDVDGDVRADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGQLVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+A+RRGS+ IDDEG P Q LIENG+LKGYMQD MNARLM M TGN RRES+AH+P
Sbjct: 300 GTIADRRGSVAIDDEGTPGQYNVLIENGVLKGYMQDKMNARLMGMKPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV G+YA NF GGQVDIT+GKFVFS S+AY+I+ GK+T
Sbjct: 360 MPRMTNTYMLAGKSTPQEIIESVDYGIYAPNFGGGQVDITSGKFVFSTSEAYLIEKGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
VKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KAVKGATLIGSGIEAMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|242241069|ref|YP_002989250.1| protease TldD [Dickeya dadantii Ech703]
gi|242133126|gb|ACS87428.1| peptidase U62 modulator of DNA gyrase [Dickeya dadantii Ech703]
Length = 481
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 261/474 (55%), Positives = 350/474 (73%), Gaps = 9/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL L + L IL + + ++DYAD YFQ + +E+W+LE+ I+K G++ I+QGVG+R
Sbjct: 10 LLTSNKLGHQDLQAILETLSERRIDYADLYFQSSYHESWVLEDRIIKDGSWHIDQGVGIR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSLYSFTDTI 387
A+SG+KT F Y+D IS L + + RSI Q +G+IK + + LY + +
Sbjct: 70 AVSGEKTGFAYADQISLEALRQSALAARSIVREQGDGRIKTLGEVAH---RGLYPALNPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S+ +KI LL+RV+ AR D RV +V A+L+G Y+++L+ DG + AD+RPLV+L
Sbjct: 127 DSLTREDKIALLQRVDATARAADARVQEVTASLTGVYELVLVAATDGTLAADVRPLVRLS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLEAKPAPAG 502
V+++VE++GRRE G+SG G R Y++F + + +V AL+NL A APAG
Sbjct: 187 VSVLVEQDGRRERGSSGGGARTGYDFFWQLSEGEARADAWAKEAVRMALVNLSAVAAPAG 246
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+++AS+ T+VD+GTLA+RR
Sbjct: 247 TMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQLGQQVASERCTVVDDGTLADRR 306
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+ +DDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNT
Sbjct: 307 GSLAMDDEGVPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNT 366
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML GK PEEII+SV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+NG++T PVKGAT
Sbjct: 367 YMLAGKSTPEEIIASVEYGLYAPNFGGGQVDITSGKFVFSTSEAYLIENGRVTTPVKGAT 426
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
LIG G ++++SM+GND+ LD GVGVCGK+GQ VPVGVGQPTLK+DS+TVGGT
Sbjct: 427 LIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSVPVGVGQPTLKLDSLTVGGT 480
>gi|237807036|ref|YP_002891476.1| peptidase U62 modulator of DNA gyrase [Tolumonas auensis DSM 9187]
gi|237499297|gb|ACQ91890.1| peptidase U62 modulator of DNA gyrase [Tolumonas auensis DSM 9187]
Length = 481
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 280/475 (58%), Positives = 359/475 (75%), Gaps = 9/475 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL LD+ IL + L + +++++ DFYFQ +E+WILE+GIVK G+++I QGVGVR
Sbjct: 10 LLAANGLDQDILAQQLRQLMSHQIEFGDFYFQSGVHESWILEDGIVKDGSYNIEQGVGVR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
AISG+KT F YSD++S N L AV + R +A G++KI + + + Y D +
Sbjct: 70 AISGEKTGFAYSDELSLNALQQAVVAARGVAAAGGEGQVKIWQPTQPA---ARYLALDPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
+ +KI LLE +++ AR DP V +V+A+LSG Y+ +LI DG +VADIRPLV+L
Sbjct: 127 PGLPQPQKITLLEELDQFARSLDPCVTQVMASLSGVYEEVLIAATDGTLVADIRPLVRLS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYFTDM-----ILEKCVSNSVNSALINLEAKPAPAG 502
VT++ E+ GRRE G+SG GGR Y+YF ++ V +V AL+NLEA APAG
Sbjct: 187 VTVLAERKGRRERGSSGGGGRCGYDYFFEVENGESRARGYVREAVRQALVNLEAIDAPAG 246
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
+M VVLG GWPG+LLHEA+GHGLEGDFNRKGSSAFS IG+++ASK TIVD+GTLA RR
Sbjct: 247 MMPVVLGAGWPGVLLHEAVGHGLEGDFNRKGSSAFSGKIGQQVASKHCTIVDDGTLAGRR 306
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+++DDEG PTQ LIENGILKGYMQD +NARLM ++ TGN RRES+A +P+PRMTNT
Sbjct: 307 GSLSVDDEGTPTQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAALPMPRMTNT 366
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML G+ P+EII+SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NGKIT P+KGAT
Sbjct: 367 YMLAGEHDPQEIIASVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIENGKITAPIKGAT 426
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
LIG+GP +++VSM+GND+ LD GVGVCGKDGQ VPVGVGQPTLK+D +TVGGT
Sbjct: 427 LIGNGPEAMQQVSMVGNDLALDKGVGVCGKDGQSVPVGVGQPTLKLDELTVGGTQ 481
>gi|156935762|ref|YP_001439678.1| protease TldD [Cronobacter sakazakii ATCC BAA-894]
gi|417789344|ref|ZP_12436997.1| protease TldD [Cronobacter sakazakii E899]
gi|449309876|ref|YP_007442232.1| protease TldD [Cronobacter sakazakii SP291]
gi|156534016|gb|ABU78842.1| hypothetical protein ESA_03632 [Cronobacter sakazakii ATCC BAA-894]
gi|333956650|gb|EGL74300.1| protease TldD [Cronobacter sakazakii E899]
gi|449099909|gb|AGE87943.1| protease TldD [Cronobacter sakazakii SP291]
Length = 481
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 265/481 (55%), Positives = 356/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG +++ ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLSANGLSHQDLFSILGQLYERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSL 380
+QGVGVRAISG+KT F Y+D IS L + ++ RSI Q G+IK + + + L
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARSIVREQGEGRIK---TLSAVDYSPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+ AR D RV +V A+L+G Y++IL+ DG + AD+
Sbjct: 120 YTTLDPLQSMSREEKLDILRRVDNAARAADKRVQEVSASLTGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTD-----MILEKCVSNSVNSALINLE 495
RPLV+L V++ VE++G+RE G+SG GGR+ Y +F + + E +V AL+NL
Sbjct: 180 RPLVRLSVSVQVEEDGKRERGSSGGGGRFGYQWFMENTDGEIRAEAWAREAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGQLVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTLANRRGS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTLANRRGSLAIDDEGVPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV G++A NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLAGKSTPQEIIESVDYGIFAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KPVKGATLIGSGIEAMQQISMVGNDVKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|425302109|ref|ZP_18691993.1| csrA activity inhibitor TldD [Escherichia coli 07798]
gi|408211584|gb|EKI36130.1| csrA activity inhibitor TldD [Escherichia coli 07798]
Length = 481
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 264/481 (54%), Positives = 360/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRAISG+KT F Y+D IS L + ++ R+I S +GK++ + ++ + L
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRDSGDGKVQTLGAVEH---SPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE++G+RE G SG GGR+ Y +F ++ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM M+ TGN RRES+AH+P
Sbjct: 300 GTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML+GK P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLSGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KPVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|157148819|ref|YP_001456138.1| protease TldD [Citrobacter koseri ATCC BAA-895]
gi|157086024|gb|ABV15702.1| hypothetical protein CKO_04652 [Citrobacter koseri ATCC BAA-895]
Length = 481
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 264/481 (54%), Positives = 360/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L+ + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLNHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRAI+G+KT F Y+D IS L + ++ R+I S +GK+K + ++ L
Sbjct: 63 DQGVGVRAINGEKTGFAYADQISLQALEQSAQAARTIVRDSGDGKVKTLGAVEH---PML 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K AR D RV +V A+L+G Y++IL+ DG + AD+
Sbjct: 120 YTAIDPLQSMSREEKLDILRRVDKAAREADKRVQEVTASLTGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V++ VE++G+RE G+SG GGR+ Y++F ++ + +V AL+NL
Sbjct: 180 RPLVRLSVSVQVEEDGKRERGSSGGGGRFGYDFFLGDLDGEVRADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG+ +AS+ T+VD+
Sbjct: 240 AVAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGHIGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+A+RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM +S TGN RRES+AH+P
Sbjct: 300 GTIADRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGVSPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLAGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KPVKGATLIGSGIEAMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|423116608|ref|ZP_17104299.1| protein tldD [Klebsiella oxytoca 10-5245]
gi|376378013|gb|EHS90779.1| protein tldD [Klebsiella oxytoca 10-5245]
Length = 481
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 263/481 (54%), Positives = 360/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L+ + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLSANGLNHQDLFTILGQLAERRLDYGDLYFQSSYHESWVLEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D IS+ L + ++ R+I ++ +GK+ + ++ +SL
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQISRLALEQSAQAARTIVRDRGDGKVH---TLGAVEYSSL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K AR D RV +V A+L+G Y++IL+ DG + AD+
Sbjct: 120 YTSIDPLQSMSREEKLDILRRVDKTARAADKRVQEVSASLTGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE+NG+RE G SG GGR+ Y+YF ++ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEENGKRERGASGGGGRFGYDYFLASLEGEVRADVWAREAVRMALVNLT 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG++ VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGMLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGHMGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ANRRGS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTMANRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV G+YA NF GGQVDIT+GKFVFS S+AY+I+ GK+T
Sbjct: 360 MPRMTNTYMLAGKSTPQEIIESVDYGIYAPNFGGGQVDITSGKFVFSTSEAYLIEKGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
VKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ VPVGVGQPTLK+D +TVGG
Sbjct: 420 KAVKGATLIGSGIEAMQQISMVGNDLKLDSGVGVCGKEGQSVPVGVGQPTLKVDKLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|291284612|ref|YP_003501430.1| suppresses inhibitory activity of CsrA [Escherichia coli O55:H7
str. CB9615]
gi|387508642|ref|YP_006160898.1| protease TldD [Escherichia coli O55:H7 str. RM12579]
gi|416789131|ref|ZP_11880313.1| protease TldD [Escherichia coli O157:H- str. 493-89]
gi|416801040|ref|ZP_11885218.1| protease TldD [Escherichia coli O157:H- str. H 2687]
gi|416811672|ref|ZP_11890029.1| protease TldD [Escherichia coli O55:H7 str. 3256-97]
gi|416822180|ref|ZP_11894687.1| protease TldD [Escherichia coli O55:H7 str. USDA 5905]
gi|416832571|ref|ZP_11899782.1| protease TldD [Escherichia coli O157:H7 str. LSU-61]
gi|419077282|ref|ZP_13622785.1| modulator of DNA gyrase family protein [Escherichia coli DEC3F]
gi|419116786|ref|ZP_13661798.1| modulator of DNA gyrase family protein [Escherichia coli DEC5A]
gi|419122500|ref|ZP_13667443.1| modulator of DNA gyrase family protein [Escherichia coli DEC5B]
gi|419127870|ref|ZP_13672745.1| modulator of DNA gyrase family protein [Escherichia coli DEC5C]
gi|419133352|ref|ZP_13678180.1| modulator of DNA gyrase family protein [Escherichia coli DEC5D]
gi|419138506|ref|ZP_13683297.1| modulator of DNA gyrase family protein [Escherichia coli DEC5E]
gi|420282384|ref|ZP_14784617.1| csrA activity inhibitor TldD [Escherichia coli TW06591]
gi|425251092|ref|ZP_18644031.1| csrA activity inhibitor TldD [Escherichia coli 5905]
gi|425269130|ref|ZP_18660756.1| csrA activity inhibitor TldD [Escherichia coli 5412]
gi|209757688|gb|ACI77156.1| suppresses inhibitory activity of CsrA [Escherichia coli]
gi|209757694|gb|ACI77159.1| suppresses inhibitory activity of CsrA [Escherichia coli]
gi|290764485|gb|ADD58446.1| suppresses inhibitory activity of CsrA [Escherichia coli O55:H7
str. CB9615]
gi|320645606|gb|EFX14615.1| protease TldD [Escherichia coli O157:H- str. 493-89]
gi|320650916|gb|EFX19373.1| protease TldD [Escherichia coli O157:H- str. H 2687]
gi|320656297|gb|EFX24209.1| protease TldD [Escherichia coli O55:H7 str. 3256-97 TW 07815]
gi|320661987|gb|EFX29395.1| protease TldD [Escherichia coli O55:H7 str. USDA 5905]
gi|320666821|gb|EFX33800.1| protease TldD [Escherichia coli O157:H7 str. LSU-61]
gi|374360636|gb|AEZ42343.1| protease TldD [Escherichia coli O55:H7 str. RM12579]
gi|377919360|gb|EHU83403.1| modulator of DNA gyrase family protein [Escherichia coli DEC3F]
gi|377958595|gb|EHV22108.1| modulator of DNA gyrase family protein [Escherichia coli DEC5A]
gi|377963463|gb|EHV26910.1| modulator of DNA gyrase family protein [Escherichia coli DEC5B]
gi|377971731|gb|EHV35085.1| modulator of DNA gyrase family protein [Escherichia coli DEC5C]
gi|377972902|gb|EHV36247.1| modulator of DNA gyrase family protein [Escherichia coli DEC5D]
gi|377982926|gb|EHV46178.1| modulator of DNA gyrase family protein [Escherichia coli DEC5E]
gi|390780545|gb|EIO48245.1| csrA activity inhibitor TldD [Escherichia coli TW06591]
gi|408162258|gb|EKH90173.1| csrA activity inhibitor TldD [Escherichia coli 5905]
gi|408181372|gb|EKI07931.1| csrA activity inhibitor TldD [Escherichia coli 5412]
Length = 481
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 265/481 (55%), Positives = 360/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLKHQDLFVILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRAISG+KT F Y+D IS L + ++ R+IA S +GK++ + ++ + L
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIARDSGDGKVQTLGAVEH---SPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE++G+RE G SG GGR+ Y +F ++ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM M+ TGN RRES+AH+P
Sbjct: 300 GTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KPVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|389842581|ref|YP_006344665.1| protease TldD [Cronobacter sakazakii ES15]
gi|429118685|ref|ZP_19179439.1| TldD protein, part of proposed TldE/TldD proteolytic complex (PMID
12029038) [Cronobacter sakazakii 680]
gi|387853057|gb|AFK01155.1| protease TldD [Cronobacter sakazakii ES15]
gi|426326838|emb|CCK10176.1| TldD protein, part of proposed TldE/TldD proteolytic complex (PMID
12029038) [Cronobacter sakazakii 680]
Length = 481
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 265/481 (55%), Positives = 356/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG +++ ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLSANGLSHQDLFSILGQLYERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSL 380
+QGVGVRAISG+KT F Y+D IS L + ++ RSI Q G+IK + + + L
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARSIVREQGEGRIK---TLSAVDYSPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+ AR D RV +V A+L+G Y++IL+ DG + AD+
Sbjct: 120 YTTLDPLQSMSREEKLDILRRVDNAARAADKRVQEVSASLTGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTD-----MILEKCVSNSVNSALINLE 495
RPLV+L V++ VE++G+RE G+SG GGR+ Y +F + + E +V AL+NL
Sbjct: 180 RPLVRLSVSVQVEEDGKRERGSSGGGGRFGYQWFMENTDGEIRAEAWAREAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTLANRRGS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTLANRRGSLAIDDEGVPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV G++A NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLAGKSTPQEIIESVDYGIFAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KPVKGATLIGSGIEAMQQISMVGNDVKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|117617879|ref|YP_854937.1| protein TldD [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
gi|117559286|gb|ABK36234.1| protein TldD [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
Length = 479
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 269/474 (56%), Positives = 359/474 (75%), Gaps = 7/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P DLDE L ++LG++ ++V++ D YFQ + +E+W+LE+GIVK G+++I+QGVGVR
Sbjct: 8 LLAPHDLDEGRLQQLLGSLMSHQVEFGDLYFQRSWHESWMLEDGIVKDGSYNIDQGVGVR 67
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+SG+KT F YSD++S L +V T + + G +K + + N LY D +
Sbjct: 68 AVSGEKTGFAYSDELSLLALQQSV--TAARGIAAAGAQGKVKAWARTEANLLYPALDPLQ 125
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
+++ ++KI LLE+++K AR DP + +V+A++SG Y+ +L+ DG + AD+RPLV+L V
Sbjct: 126 TLDKQQKIALLEQMDKFARSLDPAINQVMASISGVYEEVLVAATDGTLAADVRPLVRLSV 185
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMI-LEK----CVSNSVNSALINLEAKPAPAGI 503
T+I EK RRE G++G GGR+ Y+YF ++ LE V +V AL+NL+A APAG
Sbjct: 186 TVIAEKGDRRERGSAGGGGRFGYDYFLELDGLESRAFGYVREAVRQALVNLDAIDAPAGT 245
Query: 504 MKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRG 563
M VVLG GWPG+LLHEA+GHGLEGDFNRKGSSAF+ IG+++ASK TIVD+GTL RRG
Sbjct: 246 MPVVLGAGWPGVLLHEAVGHGLEGDFNRKGSSAFAGRIGEQVASKHCTIVDDGTLPGRRG 305
Query: 564 SINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTY 623
S++IDDEG P LIENGILKGY+QD NARLM + +TGN RRES+A +P+PRMTNTY
Sbjct: 306 SVSIDDEGTPGGYNVLIENGILKGYLQDKQNARLMGVPLTGNGRRESYAALPMPRMTNTY 365
Query: 624 MLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATL 683
ML G++ P EII+SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I++GKIT P+KGATL
Sbjct: 366 MLAGQYDPAEIIASVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIEDGKITAPIKGATL 425
Query: 684 IGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
IG+GP + +VSM+G D+ LD GVGVCGK+GQ VPVGVGQPTLK+D +TVGGT
Sbjct: 426 IGNGPEAMSQVSMVGKDLALDRGVGVCGKEGQSVPVGVGQPTLKLDQLTVGGTQ 479
>gi|417309768|ref|ZP_12096598.1| Protein tldD [Escherichia coli PCN033]
gi|338768714|gb|EGP23504.1| Protein tldD [Escherichia coli PCN033]
Length = 481
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 264/480 (55%), Positives = 360/480 (75%), Gaps = 7/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QGVGVRAISG+KT F Y+D IS L + ++ R+I + NG K+ + + ++ + LY
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIV-RDNGDGKV-QTLGAVEHSPLY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+R
Sbjct: 121 TSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADVR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L V+++VE++G+RE G SG GGR+ Y +F ++ + +V AL+NL A
Sbjct: 181 PLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLSA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+++AS+ T+VD+G
Sbjct: 241 VAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGEQVASELCTVVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ +RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM M+ TGN RRES+AH+P+
Sbjct: 301 TMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML GK P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 361 PRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTK 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGGT
Sbjct: 421 PVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGGT 480
>gi|352086310|ref|ZP_08953851.1| peptidase U62 modulator of DNA gyrase [Rhodanobacter sp. 2APBS1]
gi|351679609|gb|EHA62746.1| peptidase U62 modulator of DNA gyrase [Rhodanobacter sp. 2APBS1]
Length = 493
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 273/478 (57%), Positives = 344/478 (71%), Gaps = 8/478 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+ +A S LL P + L ++ + +D AD YFQ +++E+W LEEGIVK G+ SI
Sbjct: 19 IALAESKLLFPGGIATGDLDRVFTQLMGPSIDAADLYFQHSRSESWTLEEGIVKDGSHSI 78
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA--NQSNGKIKIIKNIKKIKINS 379
QGVGVRAISG+KT F YSD+I L+ A ++ R+IA Q GK + ++ +
Sbjct: 79 EQGVGVRAISGEKTGFAYSDEIVLPQLLEASRAARAIARDGQGAGKPLALNGVR-----A 133
Query: 380 LYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVAD 439
LY D + S+ +KI LL V+ AR +DPR+ +VI +L+ D +LI +DG + AD
Sbjct: 134 LYPALDPVESLPNPDKIALLREVDAYARSRDPRIRQVIVSLAATIDTVLIAASDGTLAAD 193
Query: 440 IRPLVQLFVTIIVEKNGRRE-IGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKP 498
+RPLV++ V +I E+NGRRE G G + + +V AL+NL++
Sbjct: 194 VRPLVRINVQVIAEQNGRREQGYAGGGGRYGYRELIENGRALRFADEAVRQALVNLDSVD 253
Query: 499 APAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL 558
APAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAF+ +G+R+A+K +TIVD+GTL
Sbjct: 254 APAGQMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRLGQRVAAKGVTIVDDGTL 313
Query: 559 ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPR 618
RRGS++IDDEG P++CTTLIE+GILKGYMQD +NARLM M+ TGN RRESF +P+PR
Sbjct: 314 PGRRGSLSIDDEGTPSECTTLIEDGILKGYMQDKLNARLMGMAPTGNGRRESFTALPMPR 373
Query: 619 MTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPV 678
MTNTYML G P EII SVK GLYA NF GGQVDITNGKF FSAS+AY+I++GKIT PV
Sbjct: 374 MTNTYMLAGSHDPAEIIRSVKKGLYAPNFGGGQVDITNGKFTFSASEAYLIEDGKITRPV 433
Query: 679 KGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
KGATLIG GP +L +VSMIGND+ LD GVGVCGKDGQ VPVGVGQPTLKID++TVGGT
Sbjct: 434 KGATLIGSGPEVLNRVSMIGNDLALDEGVGVCGKDGQSVPVGVGQPTLKIDAMTVGGT 491
>gi|74313774|ref|YP_312193.1| protease TldD [Shigella sonnei Ss046]
gi|383180420|ref|YP_005458425.1| protease TldD [Shigella sonnei 53G]
gi|414578028|ref|ZP_11435201.1| modulator of DNA gyrase family protein [Shigella sonnei 3233-85]
gi|418268716|ref|ZP_12887385.1| modulator of DNA gyrase family protein [Shigella sonnei str.
Moseley]
gi|420360597|ref|ZP_14861552.1| modulator of DNA gyrase family protein [Shigella sonnei 3226-85]
gi|420364975|ref|ZP_14865844.1| modulator of DNA gyrase family protein [Shigella sonnei 4822-66]
gi|73857251|gb|AAZ89958.1| suppresses inhibitory activity of CsrA [Shigella sonnei Ss046]
gi|391278670|gb|EIQ37371.1| modulator of DNA gyrase family protein [Shigella sonnei 3226-85]
gi|391282466|gb|EIQ41098.1| modulator of DNA gyrase family protein [Shigella sonnei 3233-85]
gi|391292477|gb|EIQ50798.1| modulator of DNA gyrase family protein [Shigella sonnei 4822-66]
gi|397896392|gb|EJL12811.1| modulator of DNA gyrase family protein [Shigella sonnei str.
Moseley]
Length = 481
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 264/481 (54%), Positives = 359/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANSLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRAISG+KT F Y+D IS L + ++ R+I S +GK++ + ++ + L
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRDSGDGKVQTLGAVEH---SPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE++G+RE G SG GGR+ Y +F ++ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM M+ TGN RRES+AH+P
Sbjct: 300 GTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KPVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|423110610|ref|ZP_17098305.1| protein tldD [Klebsiella oxytoca 10-5243]
gi|376379175|gb|EHS91930.1| protein tldD [Klebsiella oxytoca 10-5243]
Length = 481
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 263/481 (54%), Positives = 360/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L+ + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLSANGLNHQDLFTILGKLAERRLDYGDLYFQSSYHESWVLEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D IS+ L + ++ R+I ++ +GK+ + ++ +SL
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQISRLALEQSAQAARTIVRDRGDGKVH---TLGAVEYSSL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K AR D RV +V A+L+G Y++IL+ DG + AD+
Sbjct: 120 YTSIDPLQSMSREEKLDILRRVDKTARAADKRVQEVSASLTGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE+NG+RE G SG GGR+ Y+YF ++ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEENGKRERGASGGGGRFGYDYFLASLEGEVRADVWAREAVRMALVNLT 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG++ VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGMLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGHMGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ANRRGS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTMANRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV G+YA NF GGQVDIT+GKFVFS S+AY+I+ GK+T
Sbjct: 360 MPRMTNTYMLAGKSTPQEIIESVDYGIYAPNFGGGQVDITSGKFVFSTSEAYLIEKGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
VKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ VPVGVGQPTLK+D +TVGG
Sbjct: 420 KAVKGATLIGSGIEAMQQISMVGNDLKLDSGVGVCGKEGQSVPVGVGQPTLKVDKLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|416777744|ref|ZP_11875389.1| protease TldD [Escherichia coli O157:H7 str. G5101]
gi|425145983|ref|ZP_18545973.1| modulator of DNA gyrase family protein [Escherichia coli 10.0869]
gi|425263134|ref|ZP_18655132.1| csrA activity inhibitor TldD [Escherichia coli EC96038]
gi|445014106|ref|ZP_21330207.1| modulator of DNA gyrase family protein [Escherichia coli PA48]
gi|320640036|gb|EFX09617.1| protease TldD [Escherichia coli O157:H7 str. G5101]
gi|408178173|gb|EKI04899.1| csrA activity inhibitor TldD [Escherichia coli EC96038]
gi|408589422|gb|EKK63935.1| modulator of DNA gyrase family protein [Escherichia coli 10.0869]
gi|444621686|gb|ELV95656.1| modulator of DNA gyrase family protein [Escherichia coli PA48]
Length = 481
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 265/481 (55%), Positives = 360/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLKHQDLFVILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRAISG+KT F Y+D IS L + ++ R+IA S +GK++ + ++ + L
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIARDSGDGKVQTLGAVEH---SPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE++G+RE G SG GGR+ Y +F ++ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AIAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM M+ TGN RRES+AH+P
Sbjct: 300 GTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KPVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|238754641|ref|ZP_04615994.1| Protein tldD [Yersinia ruckeri ATCC 29473]
gi|238707100|gb|EEP99464.1| Protein tldD [Yersinia ruckeri ATCC 29473]
Length = 481
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 264/474 (55%), Positives = 353/474 (74%), Gaps = 9/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL L ++ L +LG + + ++DYAD YFQ + +E W+LE+ I+K G+++I+QGVGVR
Sbjct: 10 LLAANKLTQQDLFSVLGQLAERRLDYADLYFQSSYHEAWVLEDSIIKDGSYNIDQGVGVR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
A+SG+KT F Y+D I+ N L + ++ RSI ++ NG++ + + SLY D +
Sbjct: 70 AVSGEKTGFAYADQITLNALQQSAQAARSIVRETGNGRVHTLGEVSH---RSLYPLLDPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S+ EKI LL RV+K+AR D RV +V A+L+G Y++IL+ DG + AD+RPLV+L
Sbjct: 127 QSLPREEKIALLHRVDKVARAADARVQEVSASLTGVYELILVAATDGTLAADVRPLVRLS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLEAKPAPAG 502
V+++VE NG+RE G SG GGR+ Y+YF + + + +V AL+NL A APAG
Sbjct: 187 VSVLVEDNGKRERGASGGGGRFGYDYFLEQVGGDVRADAYAKEAVRMALVNLFAVAAPAG 246
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
M VVLG GWPG+LLHEA+GHGLEGDFNR+GSS FS +G+ +AS+ T+VD+GT+ RR
Sbjct: 247 AMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGSSVFSGQMGQLVASELCTVVDDGTIQGRR 306
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNT
Sbjct: 307 GSLAIDDEGVPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNT 366
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML GK PE+II+SV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+NG+IT VKGAT
Sbjct: 367 YMLAGKSTPEDIIASVEYGLYAPNFGGGQVDITSGKFVFSTSEAYLIENGRITNAVKGAT 426
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
LIG G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK+D++TVGGT
Sbjct: 427 LIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLDNLTVGGT 480
>gi|440738951|ref|ZP_20918473.1| putative modulation of DNA gyrase-like protein [Pseudomonas
fluorescens BRIP34879]
gi|447915228|ref|YP_007395796.1| putative modulation of DNA gyrase-like protein [Pseudomonas poae
RE*1-1-14]
gi|440380323|gb|ELQ16890.1| putative modulation of DNA gyrase-like protein [Pseudomonas
fluorescens BRIP34879]
gi|445199091|gb|AGE24300.1| putative modulation of DNA gyrase-like protein [Pseudomonas poae
RE*1-1-14]
Length = 480
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 267/470 (56%), Positives = 347/470 (73%), Gaps = 3/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P + + L +LG++ +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGVTIESLQTVLGDLAGPGIDAADLYFQGQISESWSLEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ L A ++ RSI+ G+ ++ + LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAITLEALGQAARAARSISRA--GQNGTVQAFSTQDVAQLYAPDNPLE 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
I+ EK++LL+RV+ R DPR+ +V +++G ++ IL+ DG + AD+RPLV+ V
Sbjct: 130 VISRAEKVELLKRVDAATRALDPRIQRVTVSMAGVWERILVASTDGSLAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
++IVE+NGRRE G G GGR +Y YF D ++ AL+NLEA PAPAG + VV
Sbjct: 190 SVIVEQNGRRERGGHGGGGRTDYRYFLADDRAMGYAREALRQALVNLEAIPAPAGTLPVV 249
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+R+ASK TIVD+GTLA RRGS+ +
Sbjct: 250 LGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGERVASKLCTIVDDGTLAGRRGSLTV 309
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML G
Sbjct: 310 DDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYMLGG 369
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ P EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+G
Sbjct: 370 ESDPAEIIASVKRGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGNG 429
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
P + KVSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 430 PEAMSKVSMVGNDLSLDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|429332216|ref|ZP_19212946.1| peptidase U62 modulator of DNA gyrase [Pseudomonas putida CSV86]
gi|428763047|gb|EKX85232.1| peptidase U62 modulator of DNA gyrase [Pseudomonas putida CSV86]
Length = 479
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 269/469 (57%), Positives = 347/469 (73%), Gaps = 2/469 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P DL L +LG + +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGDLTLDSLQSVLGELAGPGIDAADLYFQGQISESWALEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ IS L A ++ RSI+ G+ ++ + I LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAISLEALSAAAQAARSISRA--GQNGTVQAFRSQAITPLYAADNPLE 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
I+ EK+ LL+RV+ R DPR+ +V +++G ++ ILI DG + AD+RPLV+ V
Sbjct: 130 VISRAEKVALLKRVDAATRALDPRIQQVSVSMAGVWERILIAAADGSLAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVL 508
++IVE+NGRRE G G GGR +Y YFT+ + ++ AL+NLEA PAPAG + VVL
Sbjct: 190 SVIVEQNGRRERGGHGGGGRTDYRYFTEDRVMGFAREALRQALVNLEALPAPAGTLPVVL 249
Query: 509 GPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINID 568
GPGW G+LLHEA+GHGLEGDFNRKGSSA+S IG+++AS TIVD+GTL +RRGS+++D
Sbjct: 250 GPGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRIGEKVASSLCTIVDDGTLKDRRGSLSVD 309
Query: 569 DEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGK 628
DEG PT+CTTLIENG L GYMQD +NARLM M++TGN RRES+AH+P+PRMTNTYM G+
Sbjct: 310 DEGTPTECTTLIENGKLVGYMQDKLNARLMGMAVTGNGRRESYAHLPMPRMTNTYMRAGE 369
Query: 629 FHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGP 688
P EII+SVK GLY N GGQVDIT+GKFVFS S+AY+I++G+IT PVKGATLIG+GP
Sbjct: 370 SDPAEIIASVKRGLYCANLGGGQVDITSGKFVFSTSEAYLIEDGRITAPVKGATLIGNGP 429
Query: 689 NILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
+ +VSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 430 EAMSRVSMVGNDLSLDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 478
>gi|432987090|ref|ZP_20175803.1| protein tldD [Escherichia coli KTE215]
gi|433102828|ref|ZP_20288901.1| protein tldD [Escherichia coli KTE145]
gi|431496346|gb|ELH75930.1| protein tldD [Escherichia coli KTE215]
gi|431617107|gb|ELI86129.1| protein tldD [Escherichia coli KTE145]
Length = 481
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 264/481 (54%), Positives = 359/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRAISG+KT F Y+D IS L + ++ R+I S +GK++ + ++ + L
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRDSGDGKVQTLGAVEH---SPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTSVDPLQSMSSEEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE++G+RE G SG GGR+ Y +F ++ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM M+ TGN RRES+AH+P
Sbjct: 300 GTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KPVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|378581326|ref|ZP_09829974.1| putative peptidase [Pantoea stewartii subsp. stewartii DC283]
gi|377816061|gb|EHT99168.1| putative peptidase [Pantoea stewartii subsp. stewartii DC283]
Length = 481
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 255/481 (53%), Positives = 349/481 (72%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL +++++ L +LG + + ++DYAD YFQ + +E+W+LE+ I+K G++ I
Sbjct: 3 LNLVSEQLLTANNINQQDLFSLLGQLSERRLDYADLYFQSSFHESWVLEDKIIKDGSYHI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D I+ N L + ++ RSI Q NGK + + +L
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQITMNALRLSSEAARSIVREQGNGKAHTLSAVVN---RAL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ +KI LL RV+++AR DPRV +V A+L+G Y+ +L+ DG + AD+
Sbjct: 120 YAPVDPLGSLSREDKIALLHRVDQVARAADPRVQEVNASLTGVYEQVLVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L +++ VE G+RE G SG G R Y +F D+ + +V AL+NL
Sbjct: 180 RPLVRLSISVQVEDQGKRERGTSGGGARTGYAFFLADENGDVRADAWAREAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS T+VD+
Sbjct: 240 AVAAPAGALPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGKMGQLVASDLCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ RGS+ IDDEG P Q LIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTIEGLRGSLAIDDEGVPGQYNVLIENGVLKGYMQDKLNARLMGVNPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P++II SV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+ GK+T
Sbjct: 360 MPRMTNTYMLAGKSTPQDIIESVEYGLYAPNFGGGQVDITSGKFVFSTSEAYLIEKGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK+D +T+GG
Sbjct: 420 KPVKGATLIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLDKLTIGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|15803778|ref|NP_289812.1| protease TldD [Escherichia coli O157:H7 str. EDL933]
gi|15833371|ref|NP_312144.1| protease TldD [Escherichia coli O157:H7 str. Sakai]
gi|168752143|ref|ZP_02777165.1| protein TldD [Escherichia coli O157:H7 str. EC4113]
gi|168754226|ref|ZP_02779233.1| protein TldD [Escherichia coli O157:H7 str. EC4401]
gi|168763781|ref|ZP_02788788.1| protein TldD [Escherichia coli O157:H7 str. EC4501]
gi|168769100|ref|ZP_02794107.1| protein TldD [Escherichia coli O157:H7 str. EC4486]
gi|168777639|ref|ZP_02802646.1| protein TldD [Escherichia coli O157:H7 str. EC4196]
gi|168781388|ref|ZP_02806395.1| protein TldD [Escherichia coli O157:H7 str. EC4076]
gi|168786130|ref|ZP_02811137.1| protein TldD [Escherichia coli O157:H7 str. EC869]
gi|195939442|ref|ZP_03084824.1| protease TldD [Escherichia coli O157:H7 str. EC4024]
gi|208809114|ref|ZP_03251451.1| protein TldD [Escherichia coli O157:H7 str. EC4206]
gi|208813250|ref|ZP_03254579.1| protein TldD [Escherichia coli O157:H7 str. EC4045]
gi|208821254|ref|ZP_03261574.1| protein TldD [Escherichia coli O157:H7 str. EC4042]
gi|209398830|ref|YP_002272707.1| protease TldD [Escherichia coli O157:H7 str. EC4115]
gi|217327293|ref|ZP_03443376.1| protein TldD [Escherichia coli O157:H7 str. TW14588]
gi|254795187|ref|YP_003080024.1| protease TldD [Escherichia coli O157:H7 str. TW14359]
gi|261228249|ref|ZP_05942530.1| predicted peptidase [Escherichia coli O157:H7 str. FRIK2000]
gi|261255105|ref|ZP_05947638.1| predicted peptidase [Escherichia coli O157:H7 str. FRIK966]
gi|387884422|ref|YP_006314724.1| protease TldD [Escherichia coli Xuzhou21]
gi|416308548|ref|ZP_11655224.1| protease TldD [Escherichia coli O157:H7 str. 1044]
gi|416322411|ref|ZP_11664259.1| protease TldD [Escherichia coli O157:H7 str. EC1212]
gi|416332648|ref|ZP_11670559.1| protease TldD [Escherichia coli O157:H7 str. 1125]
gi|419047072|ref|ZP_13594006.1| modulator of DNA gyrase family protein [Escherichia coli DEC3A]
gi|419053016|ref|ZP_13599883.1| modulator of DNA gyrase family protein [Escherichia coli DEC3B]
gi|419059013|ref|ZP_13605815.1| modulator of DNA gyrase family protein [Escherichia coli DEC3C]
gi|419064508|ref|ZP_13611230.1| modulator of DNA gyrase family protein [Escherichia coli DEC3D]
gi|419071486|ref|ZP_13617096.1| modulator of DNA gyrase family protein [Escherichia coli DEC3E]
gi|419082490|ref|ZP_13627936.1| modulator of DNA gyrase family protein [Escherichia coli DEC4A]
gi|419088318|ref|ZP_13633670.1| modulator of DNA gyrase family protein [Escherichia coli DEC4B]
gi|419094260|ref|ZP_13639540.1| modulator of DNA gyrase family protein [Escherichia coli DEC4C]
gi|419100048|ref|ZP_13645240.1| modulator of DNA gyrase family protein [Escherichia coli DEC4D]
gi|419105863|ref|ZP_13650988.1| modulator of DNA gyrase family protein [Escherichia coli DEC4E]
gi|419111288|ref|ZP_13656340.1| modulator of DNA gyrase family protein [Escherichia coli DEC4F]
gi|420271371|ref|ZP_14773724.1| csrA activity inhibitor TldD [Escherichia coli PA22]
gi|420277282|ref|ZP_14779563.1| csrA activity inhibitor TldD [Escherichia coli PA40]
gi|420288500|ref|ZP_14790684.1| csrA activity inhibitor TldD [Escherichia coli TW10246]
gi|420294358|ref|ZP_14796472.1| csrA activity inhibitor TldD [Escherichia coli TW11039]
gi|420300212|ref|ZP_14802257.1| csrA activity inhibitor TldD [Escherichia coli TW09109]
gi|420306018|ref|ZP_14808007.1| csrA activity inhibitor TldD [Escherichia coli TW10119]
gi|420311373|ref|ZP_14813302.1| csrA activity inhibitor TldD [Escherichia coli EC1738]
gi|420317087|ref|ZP_14818960.1| csrA activity inhibitor TldD [Escherichia coli EC1734]
gi|421813174|ref|ZP_16248897.1| csrA activity inhibitor TldD [Escherichia coli 8.0416]
gi|421820071|ref|ZP_16255558.1| modulator of DNA gyrase family protein [Escherichia coli 10.0821]
gi|421826082|ref|ZP_16261436.1| csrA activity inhibitor TldD [Escherichia coli FRIK920]
gi|421832800|ref|ZP_16268082.1| csrA activity inhibitor TldD [Escherichia coli PA7]
gi|423727198|ref|ZP_17701112.1| csrA activity inhibitor TldD [Escherichia coli PA31]
gi|424079404|ref|ZP_17816372.1| csrA activity inhibitor TldD [Escherichia coli FDA505]
gi|424085860|ref|ZP_17822347.1| csrA activity inhibitor TldD [Escherichia coli FDA517]
gi|424092258|ref|ZP_17828188.1| csrA activity inhibitor TldD [Escherichia coli FRIK1996]
gi|424098932|ref|ZP_17834208.1| csrA activity inhibitor TldD [Escherichia coli FRIK1985]
gi|424105143|ref|ZP_17839886.1| csrA activity inhibitor TldD [Escherichia coli FRIK1990]
gi|424111791|ref|ZP_17846021.1| csrA activity inhibitor TldD [Escherichia coli 93-001]
gi|424117731|ref|ZP_17851565.1| csrA activity inhibitor TldD [Escherichia coli PA3]
gi|424130068|ref|ZP_17862971.1| csrA activity inhibitor TldD [Escherichia coli PA9]
gi|424142943|ref|ZP_17874810.1| csrA activity inhibitor TldD [Escherichia coli PA14]
gi|424149345|ref|ZP_17880716.1| csrA activity inhibitor TldD [Escherichia coli PA15]
gi|424155194|ref|ZP_17886126.1| csrA activity inhibitor TldD [Escherichia coli PA24]
gi|424253792|ref|ZP_17891672.1| csrA activity inhibitor TldD [Escherichia coli PA25]
gi|424332581|ref|ZP_17897578.1| csrA activity inhibitor TldD [Escherichia coli PA28]
gi|424451631|ref|ZP_17903300.1| csrA activity inhibitor TldD [Escherichia coli PA32]
gi|424457820|ref|ZP_17908930.1| csrA activity inhibitor TldD [Escherichia coli PA33]
gi|424464279|ref|ZP_17914653.1| csrA activity inhibitor TldD [Escherichia coli PA39]
gi|424470581|ref|ZP_17920393.1| csrA activity inhibitor TldD [Escherichia coli PA41]
gi|424477089|ref|ZP_17926402.1| csrA activity inhibitor TldD [Escherichia coli PA42]
gi|424482846|ref|ZP_17931822.1| csrA activity inhibitor TldD [Escherichia coli TW07945]
gi|424489027|ref|ZP_17937573.1| csrA activity inhibitor TldD [Escherichia coli TW09098]
gi|424495687|ref|ZP_17943303.1| csrA activity inhibitor TldD [Escherichia coli TW09195]
gi|424502380|ref|ZP_17949267.1| csrA activity inhibitor TldD [Escherichia coli EC4203]
gi|424508632|ref|ZP_17955016.1| csrA activity inhibitor TldD [Escherichia coli EC4196]
gi|424515986|ref|ZP_17960620.1| csrA activity inhibitor TldD [Escherichia coli TW14313]
gi|424522184|ref|ZP_17966296.1| csrA activity inhibitor TldD [Escherichia coli TW14301]
gi|424528062|ref|ZP_17971774.1| csrA activity inhibitor TldD [Escherichia coli EC4421]
gi|424534210|ref|ZP_17977554.1| csrA activity inhibitor TldD [Escherichia coli EC4422]
gi|424540260|ref|ZP_17983200.1| csrA activity inhibitor TldD [Escherichia coli EC4013]
gi|424546390|ref|ZP_17988759.1| csrA activity inhibitor TldD [Escherichia coli EC4402]
gi|424552613|ref|ZP_17994454.1| csrA activity inhibitor TldD [Escherichia coli EC4439]
gi|424558801|ref|ZP_18000207.1| csrA activity inhibitor TldD [Escherichia coli EC4436]
gi|424565140|ref|ZP_18006139.1| csrA activity inhibitor TldD [Escherichia coli EC4437]
gi|424577425|ref|ZP_18017475.1| csrA activity inhibitor TldD [Escherichia coli EC1845]
gi|424583245|ref|ZP_18022888.1| csrA activity inhibitor TldD [Escherichia coli EC1863]
gi|425099919|ref|ZP_18502648.1| modulator of DNA gyrase family protein [Escherichia coli 3.4870]
gi|425106014|ref|ZP_18508328.1| modulator of DNA gyrase family protein [Escherichia coli 5.2239]
gi|425112026|ref|ZP_18513943.1| csrA activity inhibitor TldD [Escherichia coli 6.0172]
gi|425127950|ref|ZP_18529114.1| modulator of DNA gyrase family protein [Escherichia coli 8.0586]
gi|425133692|ref|ZP_18534538.1| modulator of DNA gyrase family protein [Escherichia coli 8.2524]
gi|425140269|ref|ZP_18540647.1| csrA activity inhibitor TldD [Escherichia coli 10.0833]
gi|425152099|ref|ZP_18551710.1| modulator of DNA gyrase family protein [Escherichia coli 88.0221]
gi|425157971|ref|ZP_18557231.1| csrA activity inhibitor TldD [Escherichia coli PA34]
gi|425164321|ref|ZP_18563204.1| csrA activity inhibitor TldD [Escherichia coli FDA506]
gi|425170064|ref|ZP_18568533.1| csrA activity inhibitor TldD [Escherichia coli FDA507]
gi|425176125|ref|ZP_18574241.1| csrA activity inhibitor TldD [Escherichia coli FDA504]
gi|425182165|ref|ZP_18579856.1| csrA activity inhibitor TldD [Escherichia coli FRIK1999]
gi|425188432|ref|ZP_18585701.1| csrA activity inhibitor TldD [Escherichia coli FRIK1997]
gi|425195199|ref|ZP_18591965.1| csrA activity inhibitor TldD [Escherichia coli NE1487]
gi|425201673|ref|ZP_18597877.1| csrA activity inhibitor TldD [Escherichia coli NE037]
gi|425208060|ref|ZP_18603853.1| csrA activity inhibitor TldD [Escherichia coli FRIK2001]
gi|425213814|ref|ZP_18609210.1| csrA activity inhibitor TldD [Escherichia coli PA4]
gi|425219937|ref|ZP_18614896.1| csrA activity inhibitor TldD [Escherichia coli PA23]
gi|425226486|ref|ZP_18620949.1| csrA activity inhibitor TldD [Escherichia coli PA49]
gi|425232742|ref|ZP_18626778.1| csrA activity inhibitor TldD [Escherichia coli PA45]
gi|425238665|ref|ZP_18632381.1| csrA activity inhibitor TldD [Escherichia coli TT12B]
gi|425244903|ref|ZP_18638205.1| csrA activity inhibitor TldD [Escherichia coli MA6]
gi|425256879|ref|ZP_18649387.1| csrA activity inhibitor TldD [Escherichia coli CB7326]
gi|425296583|ref|ZP_18686747.1| csrA activity inhibitor TldD [Escherichia coli PA38]
gi|425313271|ref|ZP_18702446.1| csrA activity inhibitor TldD [Escherichia coli EC1735]
gi|425319253|ref|ZP_18708037.1| csrA activity inhibitor TldD [Escherichia coli EC1736]
gi|425325347|ref|ZP_18713700.1| csrA activity inhibitor TldD [Escherichia coli EC1737]
gi|425331715|ref|ZP_18719549.1| csrA activity inhibitor TldD [Escherichia coli EC1846]
gi|425337895|ref|ZP_18725248.1| csrA activity inhibitor TldD [Escherichia coli EC1847]
gi|425344205|ref|ZP_18731092.1| csrA activity inhibitor TldD [Escherichia coli EC1848]
gi|425356312|ref|ZP_18742376.1| csrA activity inhibitor TldD [Escherichia coli EC1850]
gi|425362275|ref|ZP_18747919.1| csrA activity inhibitor TldD [Escherichia coli EC1856]
gi|425368492|ref|ZP_18753612.1| csrA activity inhibitor TldD [Escherichia coli EC1862]
gi|425374809|ref|ZP_18759447.1| csrA activity inhibitor TldD [Escherichia coli EC1864]
gi|425387697|ref|ZP_18771252.1| csrA activity inhibitor TldD [Escherichia coli EC1866]
gi|425394349|ref|ZP_18777454.1| csrA activity inhibitor TldD [Escherichia coli EC1868]
gi|425400490|ref|ZP_18783191.1| csrA activity inhibitor TldD [Escherichia coli EC1869]
gi|425406578|ref|ZP_18788796.1| csrA activity inhibitor TldD [Escherichia coli EC1870]
gi|425412963|ref|ZP_18794722.1| csrA activity inhibitor TldD [Escherichia coli NE098]
gi|425419277|ref|ZP_18800542.1| csrA activity inhibitor TldD [Escherichia coli FRIK523]
gi|425430551|ref|ZP_18811156.1| csrA activity inhibitor TldD [Escherichia coli 0.1304]
gi|428948982|ref|ZP_19021254.1| modulator of DNA gyrase family protein [Escherichia coli 88.1467]
gi|428955056|ref|ZP_19026848.1| modulator of DNA gyrase family protein [Escherichia coli 88.1042]
gi|428961045|ref|ZP_19032335.1| modulator of DNA gyrase family protein [Escherichia coli 89.0511]
gi|428967664|ref|ZP_19038372.1| modulator of DNA gyrase family protein [Escherichia coli 90.0091]
gi|428973367|ref|ZP_19043689.1| modulator of DNA gyrase family protein [Escherichia coli 90.0039]
gi|428979772|ref|ZP_19049588.1| modulator of DNA gyrase family protein [Escherichia coli 90.2281]
gi|428985600|ref|ZP_19054989.1| modulator of DNA gyrase family protein [Escherichia coli 93.0055]
gi|428991776|ref|ZP_19060760.1| modulator of DNA gyrase family protein [Escherichia coli 93.0056]
gi|428997664|ref|ZP_19066254.1| modulator of DNA gyrase family protein [Escherichia coli 94.0618]
gi|429003933|ref|ZP_19072030.1| modulator of DNA gyrase family protein [Escherichia coli 95.0183]
gi|429010035|ref|ZP_19077488.1| modulator of DNA gyrase family protein [Escherichia coli 95.1288]
gi|429016554|ref|ZP_19083432.1| modulator of DNA gyrase family protein [Escherichia coli 95.0943]
gi|429022302|ref|ZP_19088818.1| modulator of DNA gyrase family protein [Escherichia coli 96.0428]
gi|429028455|ref|ZP_19094444.1| modulator of DNA gyrase family protein [Escherichia coli 96.0427]
gi|429034627|ref|ZP_19100145.1| modulator of DNA gyrase family protein [Escherichia coli 96.0939]
gi|429040713|ref|ZP_19105809.1| modulator of DNA gyrase family protein [Escherichia coli 96.0932]
gi|429046525|ref|ZP_19111233.1| modulator of DNA gyrase family protein [Escherichia coli 96.0107]
gi|429051984|ref|ZP_19116546.1| modulator of DNA gyrase family protein [Escherichia coli 97.0003]
gi|429057438|ref|ZP_19121722.1| modulator of DNA gyrase family protein [Escherichia coli 97.1742]
gi|429062936|ref|ZP_19126924.1| modulator of DNA gyrase family protein [Escherichia coli 97.0007]
gi|429069169|ref|ZP_19132621.1| modulator of DNA gyrase family protein [Escherichia coli 99.0672]
gi|429075109|ref|ZP_19138357.1| csrA activity inhibitor TldD [Escherichia coli 99.0678]
gi|429080309|ref|ZP_19143441.1| modulator of DNA gyrase family protein [Escherichia coli 99.0713]
gi|429828351|ref|ZP_19359370.1| modulator of DNA gyrase family protein [Escherichia coli 96.0109]
gi|429834788|ref|ZP_19365088.1| modulator of DNA gyrase family protein [Escherichia coli 97.0010]
gi|444926867|ref|ZP_21246142.1| modulator of DNA gyrase family protein [Escherichia coli
09BKT078844]
gi|444932551|ref|ZP_21251572.1| modulator of DNA gyrase family protein [Escherichia coli 99.0814]
gi|444937978|ref|ZP_21256734.1| modulator of DNA gyrase family protein [Escherichia coli 99.0815]
gi|444943570|ref|ZP_21262071.1| modulator of DNA gyrase family protein [Escherichia coli 99.0816]
gi|444954679|ref|ZP_21272757.1| modulator of DNA gyrase family protein [Escherichia coli 99.0848]
gi|444960147|ref|ZP_21277982.1| modulator of DNA gyrase family protein [Escherichia coli 99.1753]
gi|444965332|ref|ZP_21282910.1| modulator of DNA gyrase family protein [Escherichia coli 99.1775]
gi|444971334|ref|ZP_21288682.1| modulator of DNA gyrase family protein [Escherichia coli 99.1793]
gi|444976579|ref|ZP_21293681.1| modulator of DNA gyrase family protein [Escherichia coli 99.1805]
gi|444982019|ref|ZP_21298922.1| modulator of DNA gyrase family protein [Escherichia coli ATCC
700728]
gi|444987376|ref|ZP_21304150.1| modulator of DNA gyrase family protein [Escherichia coli PA11]
gi|444992686|ref|ZP_21309326.1| modulator of DNA gyrase family protein [Escherichia coli PA19]
gi|444997970|ref|ZP_21314465.1| modulator of DNA gyrase family protein [Escherichia coli PA13]
gi|445003566|ref|ZP_21319951.1| modulator of DNA gyrase family protein [Escherichia coli PA2]
gi|445008937|ref|ZP_21325174.1| modulator of DNA gyrase family protein [Escherichia coli PA47]
gi|445025387|ref|ZP_21341206.1| modulator of DNA gyrase family protein [Escherichia coli 7.1982]
gi|445030811|ref|ZP_21346476.1| modulator of DNA gyrase family protein [Escherichia coli 99.1781]
gi|445036243|ref|ZP_21351767.1| modulator of DNA gyrase family protein [Escherichia coli 99.1762]
gi|445041865|ref|ZP_21357233.1| modulator of DNA gyrase family protein [Escherichia coli PA35]
gi|445047126|ref|ZP_21362371.1| modulator of DNA gyrase family protein [Escherichia coli 3.4880]
gi|445052645|ref|ZP_21367668.1| modulator of DNA gyrase family protein [Escherichia coli 95.0083]
gi|445058341|ref|ZP_21373197.1| modulator of DNA gyrase family protein [Escherichia coli 99.0670]
gi|452968244|ref|ZP_21966471.1| protease TldD [Escherichia coli O157:H7 str. EC4009]
gi|12517868|gb|AAG58372.1|AE005552_2 suppresses inhibitory activity of CsrA [Escherichia coli O157:H7
str. EDL933]
gi|13363590|dbj|BAB37540.1| suppresses inhibitory activity of CsrA [Escherichia coli O157:H7
str. Sakai]
gi|187767170|gb|EDU31014.1| protein TldD [Escherichia coli O157:H7 str. EC4196]
gi|188013929|gb|EDU52051.1| protein TldD [Escherichia coli O157:H7 str. EC4113]
gi|189001089|gb|EDU70075.1| protein TldD [Escherichia coli O157:H7 str. EC4076]
gi|189358715|gb|EDU77134.1| protein TldD [Escherichia coli O157:H7 str. EC4401]
gi|189361766|gb|EDU80185.1| protein TldD [Escherichia coli O157:H7 str. EC4486]
gi|189366121|gb|EDU84537.1| protein TldD [Escherichia coli O157:H7 str. EC4501]
gi|189374193|gb|EDU92609.1| protein TldD [Escherichia coli O157:H7 str. EC869]
gi|208728915|gb|EDZ78516.1| protein TldD [Escherichia coli O157:H7 str. EC4206]
gi|208734527|gb|EDZ83214.1| protein TldD [Escherichia coli O157:H7 str. EC4045]
gi|208741377|gb|EDZ89059.1| protein TldD [Escherichia coli O157:H7 str. EC4042]
gi|209160230|gb|ACI37663.1| protein TldD [Escherichia coli O157:H7 str. EC4115]
gi|209757690|gb|ACI77157.1| suppresses inhibitory activity of CsrA [Escherichia coli]
gi|209757692|gb|ACI77158.1| suppresses inhibitory activity of CsrA [Escherichia coli]
gi|209757696|gb|ACI77160.1| suppresses inhibitory activity of CsrA [Escherichia coli]
gi|217319660|gb|EEC28085.1| protein TldD [Escherichia coli O157:H7 str. TW14588]
gi|254594587|gb|ACT73948.1| predicted peptidase [Escherichia coli O157:H7 str. TW14359]
gi|320189591|gb|EFW64250.1| protease TldD [Escherichia coli O157:H7 str. EC1212]
gi|326337939|gb|EGD61773.1| protease TldD [Escherichia coli O157:H7 str. 1125]
gi|326347508|gb|EGD71233.1| protease TldD [Escherichia coli O157:H7 str. 1044]
gi|377891002|gb|EHU55455.1| modulator of DNA gyrase family protein [Escherichia coli DEC3A]
gi|377891863|gb|EHU56315.1| modulator of DNA gyrase family protein [Escherichia coli DEC3B]
gi|377903680|gb|EHU67971.1| modulator of DNA gyrase family protein [Escherichia coli DEC3C]
gi|377907861|gb|EHU72084.1| modulator of DNA gyrase family protein [Escherichia coli DEC3D]
gi|377909116|gb|EHU73323.1| modulator of DNA gyrase family protein [Escherichia coli DEC3E]
gi|377924549|gb|EHU88496.1| modulator of DNA gyrase family protein [Escherichia coli DEC4A]
gi|377928810|gb|EHU92720.1| modulator of DNA gyrase family protein [Escherichia coli DEC4B]
gi|377939115|gb|EHV02872.1| modulator of DNA gyrase family protein [Escherichia coli DEC4D]
gi|377940036|gb|EHV03788.1| modulator of DNA gyrase family protein [Escherichia coli DEC4C]
gi|377945992|gb|EHV09682.1| modulator of DNA gyrase family protein [Escherichia coli DEC4E]
gi|377955194|gb|EHV18751.1| modulator of DNA gyrase family protein [Escherichia coli DEC4F]
gi|386797880|gb|AFJ30914.1| protease TldD [Escherichia coli Xuzhou21]
gi|390638973|gb|EIN18461.1| csrA activity inhibitor TldD [Escherichia coli FRIK1996]
gi|390640616|gb|EIN20068.1| csrA activity inhibitor TldD [Escherichia coli FDA517]
gi|390640825|gb|EIN20270.1| csrA activity inhibitor TldD [Escherichia coli FDA505]
gi|390658335|gb|EIN36132.1| csrA activity inhibitor TldD [Escherichia coli FRIK1985]
gi|390658446|gb|EIN36241.1| csrA activity inhibitor TldD [Escherichia coli 93-001]
gi|390661432|gb|EIN39090.1| csrA activity inhibitor TldD [Escherichia coli FRIK1990]
gi|390675417|gb|EIN51568.1| csrA activity inhibitor TldD [Escherichia coli PA3]
gi|390682351|gb|EIN58121.1| csrA activity inhibitor TldD [Escherichia coli PA9]
gi|390698357|gb|EIN72742.1| csrA activity inhibitor TldD [Escherichia coli PA14]
gi|390698960|gb|EIN73328.1| csrA activity inhibitor TldD [Escherichia coli PA15]
gi|390712792|gb|EIN85736.1| csrA activity inhibitor TldD [Escherichia coli PA22]
gi|390719768|gb|EIN92486.1| csrA activity inhibitor TldD [Escherichia coli PA25]
gi|390721357|gb|EIN94052.1| csrA activity inhibitor TldD [Escherichia coli PA24]
gi|390725469|gb|EIN97971.1| csrA activity inhibitor TldD [Escherichia coli PA28]
gi|390739088|gb|EIO10281.1| csrA activity inhibitor TldD [Escherichia coli PA31]
gi|390739626|gb|EIO10790.1| csrA activity inhibitor TldD [Escherichia coli PA32]
gi|390743220|gb|EIO14205.1| csrA activity inhibitor TldD [Escherichia coli PA33]
gi|390756879|gb|EIO26380.1| csrA activity inhibitor TldD [Escherichia coli PA40]
gi|390763658|gb|EIO32892.1| csrA activity inhibitor TldD [Escherichia coli PA39]
gi|390764994|gb|EIO34184.1| csrA activity inhibitor TldD [Escherichia coli PA41]
gi|390766530|gb|EIO35649.1| csrA activity inhibitor TldD [Escherichia coli PA42]
gi|390787407|gb|EIO54892.1| csrA activity inhibitor TldD [Escherichia coli TW07945]
gi|390789062|gb|EIO56527.1| csrA activity inhibitor TldD [Escherichia coli TW10246]
gi|390794816|gb|EIO62106.1| csrA activity inhibitor TldD [Escherichia coli TW11039]
gi|390802496|gb|EIO69532.1| csrA activity inhibitor TldD [Escherichia coli TW09098]
gi|390805833|gb|EIO72769.1| csrA activity inhibitor TldD [Escherichia coli TW09109]
gi|390814533|gb|EIO81097.1| csrA activity inhibitor TldD [Escherichia coli TW10119]
gi|390823909|gb|EIO89924.1| csrA activity inhibitor TldD [Escherichia coli EC4203]
gi|390825775|gb|EIO91677.1| csrA activity inhibitor TldD [Escherichia coli TW09195]
gi|390828763|gb|EIO94400.1| csrA activity inhibitor TldD [Escherichia coli EC4196]
gi|390843160|gb|EIP06971.1| csrA activity inhibitor TldD [Escherichia coli TW14313]
gi|390844121|gb|EIP07883.1| csrA activity inhibitor TldD [Escherichia coli TW14301]
gi|390848779|gb|EIP12232.1| csrA activity inhibitor TldD [Escherichia coli EC4421]
gi|390859239|gb|EIP21593.1| csrA activity inhibitor TldD [Escherichia coli EC4422]
gi|390863796|gb|EIP25927.1| csrA activity inhibitor TldD [Escherichia coli EC4013]
gi|390868366|gb|EIP30117.1| csrA activity inhibitor TldD [Escherichia coli EC4402]
gi|390876565|gb|EIP37550.1| csrA activity inhibitor TldD [Escherichia coli EC4439]
gi|390881951|gb|EIP42503.1| csrA activity inhibitor TldD [Escherichia coli EC4436]
gi|390891665|gb|EIP51287.1| csrA activity inhibitor TldD [Escherichia coli EC4437]
gi|390898730|gb|EIP57991.1| csrA activity inhibitor TldD [Escherichia coli EC1738]
gi|390907344|gb|EIP66213.1| csrA activity inhibitor TldD [Escherichia coli EC1734]
gi|390917255|gb|EIP75688.1| csrA activity inhibitor TldD [Escherichia coli EC1863]
gi|390918259|gb|EIP76670.1| csrA activity inhibitor TldD [Escherichia coli EC1845]
gi|408063171|gb|EKG97670.1| csrA activity inhibitor TldD [Escherichia coli PA7]
gi|408065384|gb|EKG99859.1| csrA activity inhibitor TldD [Escherichia coli FRIK920]
gi|408067753|gb|EKH02183.1| csrA activity inhibitor TldD [Escherichia coli PA34]
gi|408077645|gb|EKH11844.1| csrA activity inhibitor TldD [Escherichia coli FDA506]
gi|408081105|gb|EKH15139.1| csrA activity inhibitor TldD [Escherichia coli FDA507]
gi|408089675|gb|EKH22979.1| csrA activity inhibitor TldD [Escherichia coli FDA504]
gi|408095880|gb|EKH28844.1| csrA activity inhibitor TldD [Escherichia coli FRIK1999]
gi|408102374|gb|EKH34789.1| csrA activity inhibitor TldD [Escherichia coli FRIK1997]
gi|408106787|gb|EKH38880.1| csrA activity inhibitor TldD [Escherichia coli NE1487]
gi|408113499|gb|EKH45089.1| csrA activity inhibitor TldD [Escherichia coli NE037]
gi|408119647|gb|EKH50707.1| csrA activity inhibitor TldD [Escherichia coli FRIK2001]
gi|408125746|gb|EKH56336.1| csrA activity inhibitor TldD [Escherichia coli PA4]
gi|408135592|gb|EKH65365.1| csrA activity inhibitor TldD [Escherichia coli PA23]
gi|408138409|gb|EKH68078.1| csrA activity inhibitor TldD [Escherichia coli PA49]
gi|408144873|gb|EKH74087.1| csrA activity inhibitor TldD [Escherichia coli PA45]
gi|408153173|gb|EKH81577.1| csrA activity inhibitor TldD [Escherichia coli TT12B]
gi|408158279|gb|EKH86403.1| csrA activity inhibitor TldD [Escherichia coli MA6]
gi|408171533|gb|EKH98648.1| csrA activity inhibitor TldD [Escherichia coli CB7326]
gi|408215022|gb|EKI39428.1| csrA activity inhibitor TldD [Escherichia coli PA38]
gi|408225168|gb|EKI48857.1| csrA activity inhibitor TldD [Escherichia coli EC1735]
gi|408236305|gb|EKI59209.1| csrA activity inhibitor TldD [Escherichia coli EC1736]
gi|408240132|gb|EKI62845.1| csrA activity inhibitor TldD [Escherichia coli EC1737]
gi|408244647|gb|EKI67067.1| csrA activity inhibitor TldD [Escherichia coli EC1846]
gi|408253401|gb|EKI74999.1| csrA activity inhibitor TldD [Escherichia coli EC1847]
gi|408257311|gb|EKI78634.1| csrA activity inhibitor TldD [Escherichia coli EC1848]
gi|408272420|gb|EKI92510.1| csrA activity inhibitor TldD [Escherichia coli EC1850]
gi|408275455|gb|EKI95417.1| csrA activity inhibitor TldD [Escherichia coli EC1856]
gi|408283725|gb|EKJ02873.1| csrA activity inhibitor TldD [Escherichia coli EC1862]
gi|408289715|gb|EKJ08471.1| csrA activity inhibitor TldD [Escherichia coli EC1864]
gi|408305536|gb|EKJ22929.1| csrA activity inhibitor TldD [Escherichia coli EC1868]
gi|408306131|gb|EKJ23508.1| csrA activity inhibitor TldD [Escherichia coli EC1866]
gi|408317010|gb|EKJ33260.1| csrA activity inhibitor TldD [Escherichia coli EC1869]
gi|408322611|gb|EKJ38590.1| csrA activity inhibitor TldD [Escherichia coli EC1870]
gi|408324871|gb|EKJ40792.1| csrA activity inhibitor TldD [Escherichia coli NE098]
gi|408334925|gb|EKJ49790.1| csrA activity inhibitor TldD [Escherichia coli FRIK523]
gi|408344416|gb|EKJ58786.1| csrA activity inhibitor TldD [Escherichia coli 0.1304]
gi|408547152|gb|EKK24551.1| modulator of DNA gyrase family protein [Escherichia coli 5.2239]
gi|408547281|gb|EKK24679.1| modulator of DNA gyrase family protein [Escherichia coli 3.4870]
gi|408548694|gb|EKK26076.1| csrA activity inhibitor TldD [Escherichia coli 6.0172]
gi|408565660|gb|EKK41743.1| modulator of DNA gyrase family protein [Escherichia coli 8.0586]
gi|408577441|gb|EKK53016.1| csrA activity inhibitor TldD [Escherichia coli 10.0833]
gi|408579708|gb|EKK55160.1| modulator of DNA gyrase family protein [Escherichia coli 8.2524]
gi|408595114|gb|EKK69382.1| modulator of DNA gyrase family protein [Escherichia coli 88.0221]
gi|408601216|gb|EKK75028.1| csrA activity inhibitor TldD [Escherichia coli 8.0416]
gi|408610515|gb|EKK83886.1| modulator of DNA gyrase family protein [Escherichia coli 10.0821]
gi|427202603|gb|EKV72927.1| modulator of DNA gyrase family protein [Escherichia coli 88.1042]
gi|427203710|gb|EKV74009.1| modulator of DNA gyrase family protein [Escherichia coli 89.0511]
gi|427206513|gb|EKV76725.1| modulator of DNA gyrase family protein [Escherichia coli 88.1467]
gi|427218920|gb|EKV87900.1| modulator of DNA gyrase family protein [Escherichia coli 90.0091]
gi|427222374|gb|EKV91157.1| modulator of DNA gyrase family protein [Escherichia coli 90.2281]
gi|427225662|gb|EKV94287.1| modulator of DNA gyrase family protein [Escherichia coli 90.0039]
gi|427239719|gb|EKW07197.1| modulator of DNA gyrase family protein [Escherichia coli 93.0056]
gi|427240055|gb|EKW07522.1| modulator of DNA gyrase family protein [Escherichia coli 93.0055]
gi|427243976|gb|EKW11324.1| modulator of DNA gyrase family protein [Escherichia coli 94.0618]
gi|427258442|gb|EKW24532.1| modulator of DNA gyrase family protein [Escherichia coli 95.0183]
gi|427259335|gb|EKW25394.1| modulator of DNA gyrase family protein [Escherichia coli 95.0943]
gi|427261584|gb|EKW27505.1| modulator of DNA gyrase family protein [Escherichia coli 95.1288]
gi|427274538|gb|EKW39186.1| modulator of DNA gyrase family protein [Escherichia coli 96.0428]
gi|427277261|gb|EKW41803.1| modulator of DNA gyrase family protein [Escherichia coli 96.0427]
gi|427281587|gb|EKW45897.1| modulator of DNA gyrase family protein [Escherichia coli 96.0939]
gi|427290014|gb|EKW53513.1| modulator of DNA gyrase family protein [Escherichia coli 96.0932]
gi|427296964|gb|EKW60008.1| modulator of DNA gyrase family protein [Escherichia coli 96.0107]
gi|427298853|gb|EKW61847.1| modulator of DNA gyrase family protein [Escherichia coli 97.0003]
gi|427309689|gb|EKW71990.1| modulator of DNA gyrase family protein [Escherichia coli 97.1742]
gi|427313018|gb|EKW75154.1| modulator of DNA gyrase family protein [Escherichia coli 97.0007]
gi|427317343|gb|EKW79249.1| modulator of DNA gyrase family protein [Escherichia coli 99.0672]
gi|427326195|gb|EKW87621.1| csrA activity inhibitor TldD [Escherichia coli 99.0678]
gi|427327569|gb|EKW88956.1| modulator of DNA gyrase family protein [Escherichia coli 99.0713]
gi|429251992|gb|EKY36554.1| modulator of DNA gyrase family protein [Escherichia coli 96.0109]
gi|429253272|gb|EKY37763.1| modulator of DNA gyrase family protein [Escherichia coli 97.0010]
gi|444536198|gb|ELV16230.1| modulator of DNA gyrase family protein [Escherichia coli 99.0814]
gi|444537952|gb|ELV17860.1| modulator of DNA gyrase family protein [Escherichia coli
09BKT078844]
gi|444546255|gb|ELV25015.1| modulator of DNA gyrase family protein [Escherichia coli 99.0815]
gi|444556156|gb|ELV33587.1| modulator of DNA gyrase family protein [Escherichia coli 99.0816]
gi|444561207|gb|ELV38339.1| modulator of DNA gyrase family protein [Escherichia coli 99.0848]
gi|444570413|gb|ELV46944.1| modulator of DNA gyrase family protein [Escherichia coli 99.1753]
gi|444574158|gb|ELV50483.1| modulator of DNA gyrase family protein [Escherichia coli 99.1775]
gi|444577335|gb|ELV53467.1| modulator of DNA gyrase family protein [Escherichia coli 99.1793]
gi|444590841|gb|ELV66140.1| modulator of DNA gyrase family protein [Escherichia coli PA11]
gi|444591077|gb|ELV66374.1| modulator of DNA gyrase family protein [Escherichia coli ATCC
700728]
gi|444591746|gb|ELV67014.1| modulator of DNA gyrase family protein [Escherichia coli 99.1805]
gi|444604658|gb|ELV79323.1| modulator of DNA gyrase family protein [Escherichia coli PA13]
gi|444605708|gb|ELV80349.1| modulator of DNA gyrase family protein [Escherichia coli PA19]
gi|444613847|gb|ELV88097.1| modulator of DNA gyrase family protein [Escherichia coli PA2]
gi|444621524|gb|ELV95500.1| modulator of DNA gyrase family protein [Escherichia coli PA47]
gi|444636402|gb|ELW09803.1| modulator of DNA gyrase family protein [Escherichia coli 7.1982]
gi|444638897|gb|ELW12222.1| modulator of DNA gyrase family protein [Escherichia coli 99.1781]
gi|444643408|gb|ELW16566.1| modulator of DNA gyrase family protein [Escherichia coli 99.1762]
gi|444652867|gb|ELW25616.1| modulator of DNA gyrase family protein [Escherichia coli PA35]
gi|444658196|gb|ELW30658.1| modulator of DNA gyrase family protein [Escherichia coli 3.4880]
gi|444661059|gb|ELW33392.1| modulator of DNA gyrase family protein [Escherichia coli 95.0083]
gi|444668338|gb|ELW40360.1| modulator of DNA gyrase family protein [Escherichia coli 99.0670]
Length = 481
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 264/481 (54%), Positives = 360/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLKHQDLFVILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRAISG+KT F Y+D IS L + ++ R+IA S +GK++ + ++ + L
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIARDSGDGKVQTLGAVEH---SPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V++++E++G+RE G SG GGR+ Y +F ++ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLIEEDGKRERGASGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM M+ TGN RRES+AH+P
Sbjct: 300 GTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KPVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|240013146|ref|ZP_04720059.1| TldD [Neisseria gonorrhoeae DGI18]
gi|240015589|ref|ZP_04722129.1| TldD [Neisseria gonorrhoeae FA6140]
gi|240120217|ref|ZP_04733179.1| TldD [Neisseria gonorrhoeae PID24-1]
gi|254492735|ref|ZP_05105906.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
gi|268597902|ref|ZP_06132069.1| TldD protein [Neisseria gonorrhoeae FA19]
gi|268600152|ref|ZP_06134319.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
gi|268602555|ref|ZP_06136722.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
gi|268681104|ref|ZP_06147966.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
gi|268685584|ref|ZP_06152446.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
gi|293397955|ref|ZP_06642161.1| TldD protein [Neisseria gonorrhoeae F62]
gi|226511775|gb|EEH61120.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
gi|268551690|gb|EEZ46709.1| TldD protein [Neisseria gonorrhoeae FA19]
gi|268584283|gb|EEZ48959.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
gi|268586686|gb|EEZ51362.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
gi|268621388|gb|EEZ53788.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
gi|268625868|gb|EEZ58268.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
gi|291611901|gb|EFF40970.1| TldD protein [Neisseria gonorrhoeae F62]
Length = 494
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 264/486 (54%), Positives = 356/486 (73%), Gaps = 4/486 (0%)
Query: 253 LISQKNIHPLNIA-RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEE 311
+ +HP A ++ LLE L ++L K L + + VDYAD Y Q T E+W LEE
Sbjct: 9 FLCADTMHPTYSAVQARLLEANRLSPELLAKSLCIIGAHHVDYADIYCQRTAYESWHLEE 68
Query: 312 GIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKN 371
GIVK+G+F I+QGVGVRA+SGDKTAF Y+D + +++ + ++ R+I + GK+ K
Sbjct: 69 GIVKSGSFQIDQGVGVRAVSGDKTAFAYADSLCIDSINRSARAVRAI-GAAGGKVSA-KM 126
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ + + S +D I+ ++ K+ LL +VE IA+ DPR+++V+A L+ EYD++ + R
Sbjct: 127 PSETRGKPVCSASDPIAGLDSAAKVALLNKVEAIAKAADPRIVQVMAGLTCEYDMVYLAR 186
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
DG ADIRP+V+L VT+I ++ RRE G +G GGRY+ YF + ++ + V +V AL
Sbjct: 187 LDGKHAADIRPMVRLNVTVIAKQGERREQGGAGGGGRYDLAYFDETLVRQFVDAAVKQAL 246
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
NLE++PAPAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+R+A+K +T
Sbjct: 247 TNLESRPAPAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKGTSVFSGRIGERVAAKGVT 306
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD G +A RRGS+NIDDEGN T+ T LIE+GIL GYMQD NARL TGN RR+S+
Sbjct: 307 VVDQGDIAGRRGSLNIDDEGNETRRTVLIEDGILVGYMQDETNARLTGTQSTGNGRRQSY 366
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A +P+PRMTNT+M NG + PEEII+S+ G+YA NF GGQVDIT+GKFVF AS+A+ ++
Sbjct: 367 ASVPMPRMTNTFMENGSYEPEEIIASIDKGIYAVNFGGGQVDITSGKFVFGASEAWWVEG 426
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS- 730
G++ YPVKGAT+IG+GP +LK VSMIGND LD GVGVCGK+GQ VPVGVGQPTL+ID+
Sbjct: 427 GRLQYPVKGATIIGNGPEVLKHVSMIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAG 486
Query: 731 ITVGGT 736
+TVGG+
Sbjct: 487 LTVGGS 492
>gi|59802318|ref|YP_209030.1| hypothetical protein NGO2010 [Neisseria gonorrhoeae FA 1090]
gi|59719213|gb|AAW90618.1| putative TldD protein [Neisseria gonorrhoeae FA 1090]
Length = 480
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 264/480 (55%), Positives = 355/480 (73%), Gaps = 4/480 (0%)
Query: 259 IHPLNIA-RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTG 317
+HP A ++ LLE L ++L K L + + VDYAD Y Q T E+W LEEGIVK+G
Sbjct: 1 MHPTYSAVQARLLEANRLSPELLAKSLCIIGAHHVDYADIYCQRTAYESWHLEEGIVKSG 60
Query: 318 NFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKI 377
+F I+QGVGVRA+SGDKTAF Y+D + +++ + ++ R+I + GK+ K + +
Sbjct: 61 SFQIDQGVGVRAVSGDKTAFAYADSLCIDSINRSARAVRAI-GAAGGKVSA-KMPSETRG 118
Query: 378 NSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIV 437
+ S +D I+ ++ K+ LL +VE IA+ DPR+++V+A L+ EYD++ + R DG
Sbjct: 119 KPVCSASDPIAGLDSAAKVALLNKVEAIAKAADPRIVQVMAGLTCEYDMVYLARLDGKHA 178
Query: 438 ADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAK 497
ADIRP+V+L VT+I ++ RRE G +G GGRY+ YF + ++ + V +V AL NLE++
Sbjct: 179 ADIRPMVRLNVTVIAKQGERREQGGAGGGGRYDLAYFDETLVRQFVDAAVKQALTNLESR 238
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
PAPAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+R+A+K +T+VD G
Sbjct: 239 PAPAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKGTSVFSGRIGERVAAKGVTVVDQGD 298
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
+A RRGS+NIDDEGN T+ T LIE+GIL GYMQD NARL TGN RR+S+A +P+P
Sbjct: 299 IAGRRGSLNIDDEGNETRRTVLIEDGILVGYMQDETNARLTGTQSTGNGRRQSYASVPMP 358
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNT+M NG + PEEII+S+ G+YA NF GGQVDIT+GKFVF AS+A+ ++ G++ YP
Sbjct: 359 RMTNTFMENGSYEPEEIIASIDKGIYAVNFGGGQVDITSGKFVFGASEAWWVEGGRLQYP 418
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS-ITVGGT 736
VKGAT+IG+GP +LK VSMIGND LD GVGVCGK+GQ VPVGVGQPTL+ID+ +TVGG+
Sbjct: 419 VKGATIIGNGPEVLKHVSMIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAGLTVGGS 478
>gi|409425545|ref|ZP_11260132.1| peptidase U62, modulator of DNA gyrase [Pseudomonas sp. HYS]
Length = 479
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 268/470 (57%), Positives = 346/470 (73%), Gaps = 4/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L L +LG + +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGLTLDSLQSVLGELAGPGIDAADLYFQGQISESWALEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
A SG+KT F YS+ I+ L +A ++ RSI+ NG ++ + ++ LY + +
Sbjct: 72 AQSGEKTGFAYSNAINLEALTSAARAARSISRAGQNGSVQAFNSQDVVQ---LYGTDNPL 128
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
I+ EK+ LL+RV+ R DPR+ +V +++G ++ IL+ DG + ADIRPLV+
Sbjct: 129 EVISRAEKVDLLKRVDAATRKLDPRIQQVTVSMAGVWERILVAAADGSLAADIRPLVRFN 188
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
V++IVE+NGRRE G G GGR +Y YFTD + ++ AL+NLEA PAPAG + VV
Sbjct: 189 VSVIVEQNGRRERGGHGGGGRTDYRYFTDERVMGFAREALRQALVNLEAIPAPAGTLPVV 248
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+++AS TIVD+GTL RRGS+++
Sbjct: 249 LGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGHMGEKVASSLCTIVDDGTLEGRRGSLSV 308
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PT+CTTLIENGILKGYMQD +NARLM M+ TGN RRES+AH+P+PRMTNTYM G
Sbjct: 309 DDEGTPTECTTLIENGILKGYMQDKLNARLMGMARTGNGRRESYAHLPMPRMTNTYMRAG 368
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ P EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+G
Sbjct: 369 ESDPAEIIASVKKGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGNG 428
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
P + +VSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 429 PEAMSRVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 478
>gi|333929332|ref|YP_004502911.1| peptidase U62 modulator of DNA gyrase [Serratia sp. AS12]
gi|333934285|ref|YP_004507863.1| peptidase U62 [Serratia plymuthica AS9]
gi|386331155|ref|YP_006027325.1| peptidase U62 modulator of DNA gyrase [Serratia sp. AS13]
gi|333475892|gb|AEF47602.1| peptidase U62 modulator of DNA gyrase [Serratia plymuthica AS9]
gi|333493392|gb|AEF52554.1| peptidase U62 modulator of DNA gyrase [Serratia sp. AS12]
gi|333963488|gb|AEG30261.1| peptidase U62 modulator of DNA gyrase [Serratia sp. AS13]
Length = 481
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 263/474 (55%), Positives = 351/474 (74%), Gaps = 9/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL L + L +LG + + ++DYAD YFQ + +E W++E+ I+K G+++I+QGVGVR
Sbjct: 10 LLAANKLSHQDLFSVLGQLAERRLDYADLYFQSSYHEAWVIEDSIIKDGSYNIDQGVGVR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
A+SG+KT F Y+D I+ N L + ++ RSI S +G++ + I +LY D +
Sbjct: 70 AVSGEKTGFAYADQITLNALHQSAQAARSIVRDSGDGRVHTLGEISH---KALYPLLDPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S+ EKI LL RV+K+AR D RV +V A+++G Y+ IL+ DG + AD+RPLV+L
Sbjct: 127 QSLPREEKIALLHRVDKVARAADKRVQEVSASITGVYEQILVAATDGTLAADVRPLVRLS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEAKPAPAG 502
V+++VE++G+RE G+SG GGR+ Y+YF D+ + +V ALINL A APAG
Sbjct: 187 VSVLVEEDGKRERGSSGGGGRFGYDYFLEIADGDVRADAYAKEAVRMALINLSAVAAPAG 246
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+GTL RR
Sbjct: 247 NMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGQLVASELCTVVDDGTLQGRR 306
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNT
Sbjct: 307 GSLAIDDEGVPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNT 366
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML GK PEEII+SV+ GLYA NF GGQVDIT+GKFVFS ++AY+I+ G+IT PVKGAT
Sbjct: 367 YMLAGKSTPEEIIASVEYGLYAPNFGGGQVDITSGKFVFSTTEAYLIEKGRITKPVKGAT 426
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
LIG G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK+D +TVGGT
Sbjct: 427 LIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLDMLTVGGT 480
>gi|406675428|ref|ZP_11082617.1| hypothetical protein HMPREF1170_00825 [Aeromonas veronii AMC35]
gi|404627760|gb|EKB24560.1| hypothetical protein HMPREF1170_00825 [Aeromonas veronii AMC35]
Length = 482
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 270/481 (56%), Positives = 364/481 (75%), Gaps = 7/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L+ + LL P DLDE L ++LG++ ++V++ D YFQ + +E+W+LE+GIVK G+++I
Sbjct: 4 LSQVSASLLAPNDLDEGRLQQLLGSLMSHQVEFGDLYFQRSWHESWMLEDGIVKDGSYNI 63
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QGVGVRA+SG+KT F YSD++S L +V T + + G +K + + N LY
Sbjct: 64 DQGVGVRAVSGEKTGFAYSDELSLLALQQSV--TAARGIAAAGAHGKVKAWARTEANLLY 121
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
D + +++ ++KI LLE+++K AR DP + +V+A++SG Y+ +L+ DG + ADIR
Sbjct: 122 PAMDPLQTLDKQQKIALLEQMDKFARSLDPAINQVMASISGVYEEVLVAATDGTLAADIR 181
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-LEK----CVSNSVNSALINLEA 496
PLV+L VT+I EK RRE G++G GGR+ Y++F ++ LE V +V AL+NLEA
Sbjct: 182 PLVRLSVTVIAEKGDRRERGSAGGGGRFGYDWFLELDGLESRAFGYVREAVRQALVNLEA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSSAF+ IG+++ASK TIVD+G
Sbjct: 242 IDAPAGTMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSAFAGRIGEQVASKHCTIVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL RRGS++IDDEG P LIENGILKGY+QD NARLM + +TGN RRES+A +P+
Sbjct: 302 TLPGRRGSVSIDDEGTPGGYNVLIENGILKGYLQDKQNARLMGVPLTGNGRRESYAAMPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G++ P EII+SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I++GKIT
Sbjct: 362 PRMTNTYMLAGQYDPAEIIASVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIEDGKITA 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG+GP + +VSM+G+D+ LD GVG+CGK+GQ VPVGVGQPTLK+D +TVGGT
Sbjct: 422 PIKGATLIGNGPEAMSQVSMVGSDLALDRGVGICGKEGQSVPVGVGQPTLKLDQLTVGGT 481
Query: 737 N 737
+
Sbjct: 482 S 482
>gi|301022181|ref|ZP_07186098.1| TldD protein [Escherichia coli MS 69-1]
gi|419919573|ref|ZP_14437718.1| protease TldD [Escherichia coli KD2]
gi|432720373|ref|ZP_19955338.1| protein tldD [Escherichia coli KTE9]
gi|300397648|gb|EFJ81186.1| TldD protein [Escherichia coli MS 69-1]
gi|388387121|gb|EIL48746.1| protease TldD [Escherichia coli KD2]
gi|431261196|gb|ELF53287.1| protein tldD [Escherichia coli KTE9]
Length = 481
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 264/481 (54%), Positives = 359/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRAISG+KT F Y+D IS L + ++ R+I S +GK++ + ++ + L
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRDSGDGKVQTLGAVEH---SPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE++G+RE G SG GGR+ Y +F ++ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLANLDGEVRADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM M+ TGN RRES+AH+P
Sbjct: 300 GTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KPVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|16131134|ref|NP_417711.1| predicted peptidase [Escherichia coli str. K-12 substr. MG1655]
gi|24114530|ref|NP_709040.1| protease TldD [Shigella flexneri 2a str. 301]
gi|26249825|ref|NP_755865.1| protease TldD [Escherichia coli CFT073]
gi|30064576|ref|NP_838747.1| protease TldD [Shigella flexneri 2a str. 2457T]
gi|91212664|ref|YP_542650.1| protease TldD [Escherichia coli UTI89]
gi|110643479|ref|YP_671209.1| protease TldD [Escherichia coli 536]
gi|110807106|ref|YP_690626.1| protease TldD [Shigella flexneri 5 str. 8401]
gi|117625528|ref|YP_858851.1| protease TldD [Escherichia coli APEC O1]
gi|157159207|ref|YP_001464717.1| protease TldD [Escherichia coli E24377A]
gi|157162722|ref|YP_001460040.1| protease TldD [Escherichia coli HS]
gi|170018512|ref|YP_001723466.1| protease TldD [Escherichia coli ATCC 8739]
gi|170082775|ref|YP_001732095.1| protease TldD [Escherichia coli str. K-12 substr. DH10B]
gi|170680441|ref|YP_001745516.1| protease TldD [Escherichia coli SMS-3-5]
gi|188496108|ref|ZP_03003378.1| protein TldD [Escherichia coli 53638]
gi|191168188|ref|ZP_03029984.1| protein TldD [Escherichia coli B7A]
gi|191173824|ref|ZP_03035345.1| protein TldD [Escherichia coli F11]
gi|193065371|ref|ZP_03046442.1| protein TldD [Escherichia coli E22]
gi|193070288|ref|ZP_03051231.1| protein TldD [Escherichia coli E110019]
gi|194429129|ref|ZP_03061659.1| protein TldD [Escherichia coli B171]
gi|194434890|ref|ZP_03067136.1| protein TldD [Shigella dysenteriae 1012]
gi|194439186|ref|ZP_03071267.1| protein TldD [Escherichia coli 101-1]
gi|209920714|ref|YP_002294798.1| protease TldD [Escherichia coli SE11]
gi|215488553|ref|YP_002330984.1| protease TldD [Escherichia coli O127:H6 str. E2348/69]
gi|218555808|ref|YP_002388721.1| protease TldD [Escherichia coli IAI1]
gi|218691526|ref|YP_002399738.1| protease TldD [Escherichia coli ED1a]
gi|218696943|ref|YP_002404610.1| protease TldD [Escherichia coli 55989]
gi|218702009|ref|YP_002409638.1| protease TldD [Escherichia coli IAI39]
gi|218706858|ref|YP_002414377.1| protease TldD [Escherichia coli UMN026]
gi|222157949|ref|YP_002558088.1| Protein tldD [Escherichia coli LF82]
gi|227887959|ref|ZP_04005764.1| possible peptidase [Escherichia coli 83972]
gi|237706009|ref|ZP_04536490.1| protease TldD [Escherichia sp. 3_2_53FAA]
gi|238902345|ref|YP_002928141.1| protease TldD [Escherichia coli BW2952]
gi|251786508|ref|YP_003000812.1| protease involved in Microcin B17 maturation and in sensitivity to
the DNA gyrase inhibitor LetD [Escherichia coli
BL21(DE3)]
gi|253771926|ref|YP_003034757.1| protease TldD [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254163181|ref|YP_003046289.1| protease TldD [Escherichia coli B str. REL606]
gi|254289931|ref|YP_003055679.1| peptidase [Escherichia coli BL21(DE3)]
gi|260846051|ref|YP_003223829.1| peptidase TldD [Escherichia coli O103:H2 str. 12009]
gi|260869988|ref|YP_003236390.1| putative peptidase TldD [Escherichia coli O111:H- str. 11128]
gi|293406847|ref|ZP_06650773.1| tldD [Escherichia coli FVEC1412]
gi|293412612|ref|ZP_06655335.1| tldD [Escherichia coli B354]
gi|293416668|ref|ZP_06659307.1| tldD [Escherichia coli B185]
gi|293449569|ref|ZP_06663990.1| tldD [Escherichia coli B088]
gi|298382588|ref|ZP_06992185.1| tldD [Escherichia coli FVEC1302]
gi|300817504|ref|ZP_07097720.1| TldD protein [Escherichia coli MS 107-1]
gi|300824396|ref|ZP_07104510.1| TldD protein [Escherichia coli MS 119-7]
gi|300898011|ref|ZP_07116384.1| TldD protein [Escherichia coli MS 198-1]
gi|300904437|ref|ZP_07122283.1| TldD protein [Escherichia coli MS 84-1]
gi|300926013|ref|ZP_07141836.1| TldD protein [Escherichia coli MS 182-1]
gi|300929939|ref|ZP_07145379.1| TldD protein [Escherichia coli MS 187-1]
gi|300937358|ref|ZP_07152194.1| TldD protein [Escherichia coli MS 21-1]
gi|300950382|ref|ZP_07164308.1| TldD protein [Escherichia coli MS 116-1]
gi|300958724|ref|ZP_07170843.1| TldD protein [Escherichia coli MS 175-1]
gi|300979743|ref|ZP_07174693.1| TldD protein [Escherichia coli MS 200-1]
gi|300991029|ref|ZP_07179450.1| TldD protein [Escherichia coli MS 45-1]
gi|301028718|ref|ZP_07191926.1| TldD protein [Escherichia coli MS 196-1]
gi|301047912|ref|ZP_07194959.1| TldD protein [Escherichia coli MS 185-1]
gi|301304292|ref|ZP_07210406.1| TldD protein [Escherichia coli MS 124-1]
gi|301645525|ref|ZP_07245459.1| TldD protein [Escherichia coli MS 146-1]
gi|306816421|ref|ZP_07450553.1| protease TldD [Escherichia coli NC101]
gi|307313057|ref|ZP_07592683.1| peptidase U62 modulator of DNA gyrase [Escherichia coli W]
gi|309793821|ref|ZP_07688247.1| TldD protein [Escherichia coli MS 145-7]
gi|312968425|ref|ZP_07782634.1| modulator of DNA gyrase family protein [Escherichia coli 2362-75]
gi|312972486|ref|ZP_07786660.1| modulator of DNA gyrase family protein [Escherichia coli 1827-70]
gi|331643943|ref|ZP_08345074.1| TldD protein [Escherichia coli H736]
gi|331654842|ref|ZP_08355842.1| TldD protein [Escherichia coli M718]
gi|331659524|ref|ZP_08360466.1| TldD protein [Escherichia coli TA206]
gi|331664852|ref|ZP_08365757.1| TldD protein [Escherichia coli TA143]
gi|331670067|ref|ZP_08370912.1| TldD protein [Escherichia coli TA271]
gi|331674761|ref|ZP_08375520.1| TldD protein [Escherichia coli TA280]
gi|331679318|ref|ZP_08379990.1| TldD protein [Escherichia coli H591]
gi|331684885|ref|ZP_08385477.1| TldD protein [Escherichia coli H299]
gi|332279927|ref|ZP_08392340.1| tldD [Shigella sp. D9]
gi|378711307|ref|YP_005276200.1| peptidase U62 modulator of DNA gyrase [Escherichia coli KO11FL]
gi|384544835|ref|YP_005728899.1| Suppresses inhibitory activity of CsrA [Shigella flexneri 2002017]
gi|386282346|ref|ZP_10059999.1| protein tldD [Escherichia sp. 4_1_40B]
gi|386594039|ref|YP_006090439.1| peptidase U62 modulator of DNA gyrase [Escherichia coli DH1]
gi|386601262|ref|YP_006102768.1| protein TldD [Escherichia coli IHE3034]
gi|386602679|ref|YP_006108979.1| protease TldD [Escherichia coli UM146]
gi|386610627|ref|YP_006126113.1| peptidase [Escherichia coli W]
gi|386616031|ref|YP_006135697.1| modulator of DNA gyrase [Escherichia coli UMNK88]
gi|386626047|ref|YP_006145775.1| putative peptidase [Escherichia coli O7:K1 str. CE10]
gi|386631120|ref|YP_006150840.1| protease TldD [Escherichia coli str. 'clone D i2']
gi|386636040|ref|YP_006155759.1| protease TldD [Escherichia coli str. 'clone D i14']
gi|386640838|ref|YP_006107636.1| suppresses inhibitory activity of CsrA [Escherichia coli ABU 83972]
gi|386699794|ref|YP_006163631.1| protease TldD [Escherichia coli KO11FL]
gi|386706501|ref|YP_006170348.1| Protein tldD [Escherichia coli P12b]
gi|386711145|ref|YP_006174866.1| protease TldD [Escherichia coli W]
gi|387608960|ref|YP_006097816.1| TldD protein [Escherichia coli 042]
gi|387613929|ref|YP_006117045.1| TldD protein [Escherichia coli ETEC H10407]
gi|387618533|ref|YP_006121555.1| protease TldD [Escherichia coli O83:H1 str. NRG 857C]
gi|387622905|ref|YP_006130533.1| tldD [Escherichia coli DH1]
gi|388479236|ref|YP_491428.1| peptidase [Escherichia coli str. K-12 substr. W3110]
gi|404376618|ref|ZP_10981775.1| protein tldD [Escherichia sp. 1_1_43]
gi|407471213|ref|YP_006782344.1| protease TldD [Escherichia coli O104:H4 str. 2009EL-2071]
gi|407480130|ref|YP_006777279.1| protease TldD [Escherichia coli O104:H4 str. 2011C-3493]
gi|410480691|ref|YP_006768237.1| protease TldD [Escherichia coli O104:H4 str. 2009EL-2050]
gi|415776477|ref|ZP_11487998.1| modulator of DNA gyrase family protein [Escherichia coli 3431]
gi|415795716|ref|ZP_11497229.1| modulator of DNA gyrase family protein [Escherichia coli E128010]
gi|415811123|ref|ZP_11503473.1| modulator of DNA gyrase family protein [Escherichia coli LT-68]
gi|415820461|ref|ZP_11509568.1| modulator of DNA gyrase family protein [Escherichia coli OK1180]
gi|415839156|ref|ZP_11520974.1| modulator of DNA gyrase family protein [Escherichia coli RN587/1]
gi|415857185|ref|ZP_11531959.1| modulator of DNA gyrase family protein [Shigella flexneri 2a str.
2457T]
gi|415861869|ref|ZP_11535479.1| TldD protein [Escherichia coli MS 85-1]
gi|415876850|ref|ZP_11543203.1| TldD protein [Escherichia coli MS 79-10]
gi|416337295|ref|ZP_11673721.1| protease TldD [Escherichia coli WV_060327]
gi|416341165|ref|ZP_11675886.1| protease TldD [Escherichia coli EC4100B]
gi|416899578|ref|ZP_11929045.1| modulator of DNA gyrase family protein [Escherichia coli STEC_7v]
gi|417086937|ref|ZP_11954034.1| peptidase [Escherichia coli cloneA_i1]
gi|417117029|ref|ZP_11967890.1| TldD/PmbA family protein [Escherichia coli 1.2741]
gi|417135128|ref|ZP_11979913.1| TldD/PmbA family protein [Escherichia coli 5.0588]
gi|417138714|ref|ZP_11982365.1| TldD/PmbA family protein [Escherichia coli 97.0259]
gi|417146994|ref|ZP_11987841.1| TldD/PmbA family protein [Escherichia coli 1.2264]
gi|417157764|ref|ZP_11995388.1| TldD/PmbA family protein [Escherichia coli 96.0497]
gi|417163185|ref|ZP_11998515.1| TldD/PmbA family protein [Escherichia coli 99.0741]
gi|417173844|ref|ZP_12003640.1| TldD/PmbA family protein [Escherichia coli 3.2608]
gi|417184389|ref|ZP_12010081.1| TldD/PmbA family protein [Escherichia coli 93.0624]
gi|417197536|ref|ZP_12016470.1| TldD/PmbA family protein [Escherichia coli 4.0522]
gi|417210761|ref|ZP_12021178.1| TldD/PmbA family protein [Escherichia coli JB1-95]
gi|417221413|ref|ZP_12024853.1| TldD/PmbA family protein [Escherichia coli 96.154]
gi|417228120|ref|ZP_12029878.1| TldD/PmbA family protein [Escherichia coli 5.0959]
gi|417249116|ref|ZP_12040900.1| TldD/PmbA family protein [Escherichia coli 4.0967]
gi|417264320|ref|ZP_12051714.1| TldD/PmbA family protein [Escherichia coli 2.3916]
gi|417267625|ref|ZP_12054986.1| TldD/PmbA family protein [Escherichia coli 3.3884]
gi|417272699|ref|ZP_12060048.1| TldD/PmbA family protein [Escherichia coli 2.4168]
gi|417275876|ref|ZP_12063208.1| TldD/PmbA family protein [Escherichia coli 3.2303]
gi|417282131|ref|ZP_12069431.1| TldD/PmbA family protein [Escherichia coli 3003]
gi|417285429|ref|ZP_12072720.1| TldD/PmbA family protein [Escherichia coli TW07793]
gi|417291348|ref|ZP_12078629.1| TldD/PmbA family protein [Escherichia coli B41]
gi|417582857|ref|ZP_12233658.1| modulator of DNA gyrase family protein [Escherichia coli STEC_B2F1]
gi|417588353|ref|ZP_12239117.1| modulator of DNA gyrase family protein [Escherichia coli
STEC_C165-02]
gi|417593642|ref|ZP_12244333.1| modulator of DNA gyrase family protein [Escherichia coli 2534-86]
gi|417598647|ref|ZP_12249274.1| modulator of DNA gyrase family protein [Escherichia coli 3030-1]
gi|417604125|ref|ZP_12254690.1| modulator of DNA gyrase family protein [Escherichia coli STEC_94C]
gi|417609933|ref|ZP_12260431.1| modulator of DNA gyrase family protein [Escherichia coli
STEC_DG131-3]
gi|417619852|ref|ZP_12270259.1| modulator of DNA gyrase family protein [Escherichia coli G58-1]
gi|417625329|ref|ZP_12275621.1| modulator of DNA gyrase family protein [Escherichia coli
STEC_H.1.8]
gi|417630692|ref|ZP_12280927.1| modulator of DNA gyrase family protein [Escherichia coli
STEC_MHI813]
gi|417636337|ref|ZP_12286547.1| modulator of DNA gyrase family protein [Escherichia coli
STEC_S1191]
gi|417641145|ref|ZP_12291279.1| modulator of DNA gyrase family protein [Escherichia coli TX1999]
gi|417668726|ref|ZP_12318267.1| modulator of DNA gyrase family protein [Escherichia coli STEC_O31]
gi|417674198|ref|ZP_12323635.1| modulator of DNA gyrase family protein [Shigella dysenteriae
155-74]
gi|417691097|ref|ZP_12340315.1| modulator of DNA gyrase family protein [Shigella boydii 5216-82]
gi|417703791|ref|ZP_12352895.1| modulator of DNA gyrase family protein [Shigella flexneri K-218]
gi|417714299|ref|ZP_12363257.1| modulator of DNA gyrase family protein [Shigella flexneri K-272]
gi|417719147|ref|ZP_12368037.1| modulator of DNA gyrase family protein [Shigella flexneri K-227]
gi|417724870|ref|ZP_12373666.1| modulator of DNA gyrase family protein [Shigella flexneri K-304]
gi|417730210|ref|ZP_12378900.1| modulator of DNA gyrase family protein [Shigella flexneri K-671]
gi|417734997|ref|ZP_12383644.1| modulator of DNA gyrase family protein [Shigella flexneri 2747-71]
gi|417740118|ref|ZP_12388690.1| modulator of DNA gyrase family protein [Shigella flexneri 4343-70]
gi|417745162|ref|ZP_12393683.1| modulator of DNA gyrase family protein [Shigella flexneri 2930-71]
gi|417757594|ref|ZP_12405660.1| modulator of DNA gyrase family protein [Escherichia coli DEC2B]
gi|417806888|ref|ZP_12453820.1| protease TldD [Escherichia coli O104:H4 str. LB226692]
gi|417834635|ref|ZP_12481077.1| protease TldD [Escherichia coli O104:H4 str. 01-09591]
gi|417866055|ref|ZP_12511098.1| hypothetical protein C22711_2986 [Escherichia coli O104:H4 str.
C227-11]
gi|417946363|ref|ZP_12589582.1| protease TldD [Escherichia coli XH140A]
gi|417978196|ref|ZP_12618968.1| protease TldD [Escherichia coli XH001]
gi|418040865|ref|ZP_12679097.1| protease TldD [Escherichia coli W26]
gi|418258755|ref|ZP_12881951.1| modulator of DNA gyrase family protein [Shigella flexneri 6603-63]
gi|418304875|ref|ZP_12916669.1| modulator of DNA gyrase family protein [Escherichia coli UMNF18]
gi|418943941|ref|ZP_13497071.1| protease TldD [Escherichia coli O157:H43 str. T22]
gi|418956367|ref|ZP_13508293.1| protease TldD [Escherichia coli J53]
gi|418998592|ref|ZP_13546177.1| modulator of DNA gyrase family protein [Escherichia coli DEC1A]
gi|419003969|ref|ZP_13551482.1| modulator of DNA gyrase family protein [Escherichia coli DEC1B]
gi|419009640|ref|ZP_13557059.1| modulator of DNA gyrase family protein [Escherichia coli DEC1C]
gi|419015223|ref|ZP_13562564.1| modulator of DNA gyrase family protein [Escherichia coli DEC1D]
gi|419020272|ref|ZP_13567572.1| modulator of DNA gyrase family protein [Escherichia coli DEC1E]
gi|419025735|ref|ZP_13572955.1| modulator of DNA gyrase family protein [Escherichia coli DEC2A]
gi|419030866|ref|ZP_13578015.1| modulator of DNA gyrase family protein [Escherichia coli DEC2C]
gi|419036482|ref|ZP_13583559.1| modulator of DNA gyrase family protein [Escherichia coli DEC2D]
gi|419041571|ref|ZP_13588590.1| modulator of DNA gyrase family protein [Escherichia coli DEC2E]
gi|419144326|ref|ZP_13689056.1| modulator of DNA gyrase family protein [Escherichia coli DEC6A]
gi|419149711|ref|ZP_13694363.1| modulator of DNA gyrase family protein [Escherichia coli DEC6B]
gi|419155717|ref|ZP_13700274.1| modulator of DNA gyrase family protein [Escherichia coli DEC6C]
gi|419161068|ref|ZP_13705565.1| modulator of DNA gyrase family protein [Escherichia coli DEC6D]
gi|419166117|ref|ZP_13710569.1| modulator of DNA gyrase family protein [Escherichia coli DEC6E]
gi|419172081|ref|ZP_13715961.1| modulator of DNA gyrase family protein [Escherichia coli DEC7A]
gi|419176703|ref|ZP_13720515.1| modulator of DNA gyrase family protein [Escherichia coli DEC7B]
gi|419182644|ref|ZP_13726254.1| modulator of DNA gyrase family protein [Escherichia coli DEC7C]
gi|419188262|ref|ZP_13731769.1| modulator of DNA gyrase family protein [Escherichia coli DEC7D]
gi|419193391|ref|ZP_13736837.1| modulator of DNA gyrase family protein [Escherichia coli DEC7E]
gi|419198946|ref|ZP_13742241.1| modulator of DNA gyrase family protein [Escherichia coli DEC8A]
gi|419203524|ref|ZP_13746722.1| modulator of DNA gyrase family protein [Escherichia coli DEC8B]
gi|419223390|ref|ZP_13766303.1| modulator of DNA gyrase family protein [Escherichia coli DEC8E]
gi|419228838|ref|ZP_13771681.1| modulator of DNA gyrase family protein [Escherichia coli DEC9A]
gi|419234180|ref|ZP_13776949.1| modulator of DNA gyrase family protein [Escherichia coli DEC9B]
gi|419239807|ref|ZP_13782515.1| modulator of DNA gyrase family protein [Escherichia coli DEC9C]
gi|419245305|ref|ZP_13787939.1| modulator of DNA gyrase family protein [Escherichia coli DEC9D]
gi|419251166|ref|ZP_13793735.1| modulator of DNA gyrase family protein [Escherichia coli DEC9E]
gi|419279887|ref|ZP_13822130.1| modulator of DNA gyrase family protein [Escherichia coli DEC10E]
gi|419286150|ref|ZP_13828314.1| modulator of DNA gyrase family protein [Escherichia coli DEC10F]
gi|419291438|ref|ZP_13833524.1| modulator of DNA gyrase family protein [Escherichia coli DEC11A]
gi|419296725|ref|ZP_13838764.1| modulator of DNA gyrase family protein [Escherichia coli DEC11B]
gi|419302241|ref|ZP_13844234.1| modulator of DNA gyrase family protein [Escherichia coli DEC11C]
gi|419308226|ref|ZP_13850121.1| modulator of DNA gyrase family protein [Escherichia coli DEC11D]
gi|419313261|ref|ZP_13855120.1| modulator of DNA gyrase family protein [Escherichia coli DEC11E]
gi|419318690|ref|ZP_13860489.1| modulator of DNA gyrase family protein [Escherichia coli DEC12A]
gi|419324958|ref|ZP_13866646.1| modulator of DNA gyrase family protein [Escherichia coli DEC12B]
gi|419330895|ref|ZP_13872493.1| modulator of DNA gyrase family protein [Escherichia coli DEC12C]
gi|419336387|ref|ZP_13877905.1| modulator of DNA gyrase family protein [Escherichia coli DEC12D]
gi|419341796|ref|ZP_13883252.1| modulator of DNA gyrase family protein [Escherichia coli DEC12E]
gi|419346992|ref|ZP_13888363.1| modulator of DNA gyrase family protein [Escherichia coli DEC13A]
gi|419351458|ref|ZP_13892789.1| modulator of DNA gyrase family protein [Escherichia coli DEC13B]
gi|419356929|ref|ZP_13898177.1| modulator of DNA gyrase family protein [Escherichia coli DEC13C]
gi|419361910|ref|ZP_13903121.1| modulator of DNA gyrase family protein [Escherichia coli DEC13D]
gi|419366895|ref|ZP_13908047.1| modulator of DNA gyrase family protein [Escherichia coli DEC13E]
gi|419371818|ref|ZP_13912928.1| modulator of DNA gyrase family protein [Escherichia coli DEC14A]
gi|419377314|ref|ZP_13918334.1| modulator of DNA gyrase family protein [Escherichia coli DEC14B]
gi|419382652|ref|ZP_13923595.1| modulator of DNA gyrase family protein [Escherichia coli DEC14C]
gi|419387940|ref|ZP_13928809.1| modulator of DNA gyrase family protein [Escherichia coli DEC14D]
gi|419393396|ref|ZP_13934198.1| modulator of DNA gyrase family protein [Escherichia coli DEC15A]
gi|419398497|ref|ZP_13939260.1| modulator of DNA gyrase family protein [Escherichia coli DEC15B]
gi|419403779|ref|ZP_13944499.1| modulator of DNA gyrase family protein [Escherichia coli DEC15C]
gi|419408937|ref|ZP_13949623.1| modulator of DNA gyrase family protein [Escherichia coli DEC15D]
gi|419414488|ref|ZP_13955125.1| modulator of DNA gyrase family protein [Escherichia coli DEC15E]
gi|419702068|ref|ZP_14229666.1| protease TldD [Escherichia coli SCI-07]
gi|419810515|ref|ZP_14335395.1| protease TldD [Escherichia coli O32:H37 str. P4]
gi|419866748|ref|ZP_14389097.1| protease TldD [Escherichia coli O103:H25 str. CVM9340]
gi|419868201|ref|ZP_14390493.1| protease TldD [Escherichia coli O103:H2 str. CVM9450]
gi|419890776|ref|ZP_14410973.1| protease TldD [Escherichia coli O111:H8 str. CVM9570]
gi|419898552|ref|ZP_14418101.1| protease TldD [Escherichia coli O111:H8 str. CVM9574]
gi|419922658|ref|ZP_14440670.1| protease TldD [Escherichia coli 541-15]
gi|419927677|ref|ZP_14445411.1| protease TldD [Escherichia coli 541-1]
gi|419935164|ref|ZP_14452251.1| protease TldD [Escherichia coli 576-1]
gi|419939262|ref|ZP_14456058.1| protease TldD [Escherichia coli 75]
gi|419946253|ref|ZP_14462670.1| protease TldD [Escherichia coli HM605]
gi|419947881|ref|ZP_14464191.1| protease TldD [Escherichia coli CUMT8]
gi|420087983|ref|ZP_14599909.1| protease TldD [Escherichia coli O111:H8 str. CVM9602]
gi|420098655|ref|ZP_14609914.1| protease TldD [Escherichia coli O111:H8 str. CVM9634]
gi|420322212|ref|ZP_14824036.1| modulator of DNA gyrase family protein [Shigella flexneri 2850-71]
gi|420343648|ref|ZP_14845113.1| modulator of DNA gyrase family protein [Shigella flexneri K-404]
gi|420349201|ref|ZP_14850582.1| modulator of DNA gyrase family protein [Shigella boydii 965-58]
gi|420375737|ref|ZP_14875570.1| modulator of DNA gyrase family protein [Shigella flexneri 1235-66]
gi|420387491|ref|ZP_14886832.1| modulator of DNA gyrase family protein [Escherichia coli EPECa12]
gi|420393358|ref|ZP_14892604.1| modulator of DNA gyrase family protein [Escherichia coli EPEC
C342-62]
gi|421774788|ref|ZP_16211399.1| protease TldD [Escherichia coli AD30]
gi|422332718|ref|ZP_16413731.1| protein tldD [Escherichia coli 4_1_47FAA]
gi|422353627|ref|ZP_16434376.1| TldD protein [Escherichia coli MS 117-3]
gi|422362418|ref|ZP_16442989.1| TldD protein [Escherichia coli MS 153-1]
gi|422367306|ref|ZP_16447758.1| TldD protein [Escherichia coli MS 16-3]
gi|422372728|ref|ZP_16453073.1| TldD protein [Escherichia coli MS 60-1]
gi|422379661|ref|ZP_16459849.1| TldD protein [Escherichia coli MS 57-2]
gi|422749661|ref|ZP_16803572.1| TldD protein [Escherichia coli H252]
gi|422753820|ref|ZP_16807646.1| TldD protein [Escherichia coli H263]
gi|422760707|ref|ZP_16814467.1| TldD protein [Escherichia coli E1167]
gi|422767265|ref|ZP_16820991.1| TldD protein [Escherichia coli E1520]
gi|422770885|ref|ZP_16824575.1| TldD protein [Escherichia coli E482]
gi|422775508|ref|ZP_16829163.1| TldD protein [Escherichia coli H120]
gi|422779801|ref|ZP_16832586.1| TldD protein [Escherichia coli TW10509]
gi|422787228|ref|ZP_16839966.1| TldD protein [Escherichia coli H489]
gi|422793134|ref|ZP_16845831.1| TldD protein [Escherichia coli TA007]
gi|422801189|ref|ZP_16849686.1| TldD protein [Escherichia coli M863]
gi|422818411|ref|ZP_16866624.1| protein tldD [Escherichia coli M919]
gi|422827356|ref|ZP_16875530.1| tldD [Escherichia coli B093]
gi|422833411|ref|ZP_16881477.1| tldD [Escherichia coli E101]
gi|422841252|ref|ZP_16889222.1| tldD [Escherichia coli H397]
gi|422960011|ref|ZP_16971646.1| protein tldD [Escherichia coli H494]
gi|422989442|ref|ZP_16980214.1| protein tldD [Escherichia coli O104:H4 str. C227-11]
gi|422996337|ref|ZP_16987100.1| protein tldD [Escherichia coli O104:H4 str. C236-11]
gi|423001486|ref|ZP_16992239.1| protein tldD [Escherichia coli O104:H4 str. 09-7901]
gi|423005146|ref|ZP_16995891.1| protein tldD [Escherichia coli O104:H4 str. 04-8351]
gi|423011651|ref|ZP_17002384.1| protein tldD [Escherichia coli O104:H4 str. 11-3677]
gi|423020879|ref|ZP_17011586.1| protein tldD [Escherichia coli O104:H4 str. 11-4404]
gi|423026044|ref|ZP_17016739.1| protein tldD [Escherichia coli O104:H4 str. 11-4522]
gi|423031863|ref|ZP_17022549.1| protein tldD [Escherichia coli O104:H4 str. 11-4623]
gi|423034735|ref|ZP_17025413.1| protein tldD [Escherichia coli O104:H4 str. 11-4632 C1]
gi|423039863|ref|ZP_17030532.1| protein tldD [Escherichia coli O104:H4 str. 11-4632 C2]
gi|423046547|ref|ZP_17037206.1| protein tldD [Escherichia coli O104:H4 str. 11-4632 C3]
gi|423055084|ref|ZP_17043890.1| protein tldD [Escherichia coli O104:H4 str. 11-4632 C4]
gi|423057076|ref|ZP_17045875.1| protein tldD [Escherichia coli O104:H4 str. 11-4632 C5]
gi|423702751|ref|ZP_17677183.1| protein tldD [Escherichia coli H730]
gi|423707538|ref|ZP_17681918.1| protein tldD [Escherichia coli B799]
gi|424767572|ref|ZP_18194889.1| tldD [Escherichia coli O111:H8 str. CFSAN001632]
gi|424839491|ref|ZP_18264128.1| protease TldD [Shigella flexneri 5a str. M90T]
gi|425116792|ref|ZP_18518582.1| csrA activity inhibitor TldD [Escherichia coli 8.0566]
gi|425121544|ref|ZP_18523230.1| modulator of DNA gyrase family protein [Escherichia coli 8.0569]
gi|425274441|ref|ZP_18665839.1| csrA activity inhibitor TldD [Escherichia coli TW15901]
gi|425279636|ref|ZP_18670863.1| csrA activity inhibitor TldD [Escherichia coli ARS4.2123]
gi|425285019|ref|ZP_18676049.1| csrA activity inhibitor TldD [Escherichia coli TW00353]
gi|425290382|ref|ZP_18681208.1| csrA activity inhibitor TldD [Escherichia coli 3006]
gi|425307030|ref|ZP_18696710.1| csrA activity inhibitor TldD [Escherichia coli N1]
gi|425424116|ref|ZP_18805274.1| csrA activity inhibitor TldD [Escherichia coli 0.1288]
gi|427806442|ref|ZP_18973509.1| suppresses inhibitory activity of CsrA [Escherichia coli chi7122]
gi|427811033|ref|ZP_18978098.1| suppresses inhibitory activity of CsrA [Escherichia coli]
gi|429720907|ref|ZP_19255829.1| protein tldD [Escherichia coli O104:H4 str. Ec11-9450]
gi|429772805|ref|ZP_19304823.1| protein tldD [Escherichia coli O104:H4 str. 11-02030]
gi|429778171|ref|ZP_19310139.1| protein tldD [Escherichia coli O104:H4 str. 11-02033-1]
gi|429786477|ref|ZP_19318370.1| protein tldD [Escherichia coli O104:H4 str. 11-02092]
gi|429787421|ref|ZP_19319311.1| protein tldD [Escherichia coli O104:H4 str. 11-02093]
gi|429793217|ref|ZP_19325063.1| protein tldD [Escherichia coli O104:H4 str. 11-02281]
gi|429799796|ref|ZP_19331590.1| protein tldD [Escherichia coli O104:H4 str. 11-02318]
gi|429803412|ref|ZP_19335170.1| protein tldD [Escherichia coli O104:H4 str. 11-02913]
gi|429808053|ref|ZP_19339773.1| protein tldD [Escherichia coli O104:H4 str. 11-03439]
gi|429813752|ref|ZP_19345429.1| protein tldD [Escherichia coli O104:H4 str. 11-04080]
gi|429818963|ref|ZP_19350595.1| protein tldD [Escherichia coli O104:H4 str. 11-03943]
gi|429905311|ref|ZP_19371288.1| protein tldD [Escherichia coli O104:H4 str. Ec11-9990]
gi|429909447|ref|ZP_19375410.1| protein tldD [Escherichia coli O104:H4 str. Ec11-9941]
gi|429915319|ref|ZP_19381265.1| protein tldD [Escherichia coli O104:H4 str. Ec11-4984]
gi|429920365|ref|ZP_19386293.1| protein tldD [Escherichia coli O104:H4 str. Ec11-5604]
gi|429926169|ref|ZP_19392081.1| protein tldD [Escherichia coli O104:H4 str. Ec11-4986]
gi|429930104|ref|ZP_19396005.1| protein tldD [Escherichia coli O104:H4 str. Ec11-4987]
gi|429936643|ref|ZP_19402528.1| protein tldD [Escherichia coli O104:H4 str. Ec11-4988]
gi|429942324|ref|ZP_19408197.1| protein tldD [Escherichia coli O104:H4 str. Ec11-5603]
gi|429945007|ref|ZP_19410868.1| protein tldD [Escherichia coli O104:H4 str. Ec11-6006]
gi|429952563|ref|ZP_19418408.1| protein tldD [Escherichia coli O104:H4 str. Ec12-0465]
gi|429955918|ref|ZP_19421748.1| protein tldD [Escherichia coli O104:H4 str. Ec12-0466]
gi|432355244|ref|ZP_19598512.1| protein tldD [Escherichia coli KTE2]
gi|432359691|ref|ZP_19602905.1| protein tldD [Escherichia coli KTE4]
gi|432366696|ref|ZP_19609814.1| protein tldD [Escherichia coli KTE10]
gi|432378426|ref|ZP_19621410.1| protein tldD [Escherichia coli KTE12]
gi|432382966|ref|ZP_19625905.1| protein tldD [Escherichia coli KTE15]
gi|432388997|ref|ZP_19631877.1| protein tldD [Escherichia coli KTE16]
gi|432393829|ref|ZP_19636653.1| protein tldD [Escherichia coli KTE21]
gi|432399190|ref|ZP_19641965.1| protein tldD [Escherichia coli KTE25]
gi|432403619|ref|ZP_19646364.1| protein tldD [Escherichia coli KTE26]
gi|432408315|ref|ZP_19651019.1| protein tldD [Escherichia coli KTE28]
gi|432418772|ref|ZP_19661367.1| protein tldD [Escherichia coli KTE44]
gi|432427880|ref|ZP_19670364.1| protein tldD [Escherichia coli KTE181]
gi|432433456|ref|ZP_19675881.1| protein tldD [Escherichia coli KTE187]
gi|432438052|ref|ZP_19680436.1| protein tldD [Escherichia coli KTE188]
gi|432442728|ref|ZP_19685064.1| protein tldD [Escherichia coli KTE189]
gi|432447848|ref|ZP_19690145.1| protein tldD [Escherichia coli KTE191]
gi|432451483|ref|ZP_19693740.1| protein tldD [Escherichia coli KTE193]
gi|432458364|ref|ZP_19700541.1| protein tldD [Escherichia coli KTE201]
gi|432462583|ref|ZP_19704717.1| protein tldD [Escherichia coli KTE204]
gi|432467555|ref|ZP_19709634.1| protein tldD [Escherichia coli KTE205]
gi|432472590|ref|ZP_19714628.1| protein tldD [Escherichia coli KTE206]
gi|432477576|ref|ZP_19719566.1| protein tldD [Escherichia coli KTE208]
gi|432482572|ref|ZP_19724523.1| protein tldD [Escherichia coli KTE210]
gi|432487007|ref|ZP_19728917.1| protein tldD [Escherichia coli KTE212]
gi|432491024|ref|ZP_19732888.1| protein tldD [Escherichia coli KTE213]
gi|432497357|ref|ZP_19739150.1| protein tldD [Escherichia coli KTE214]
gi|432506114|ref|ZP_19747834.1| protein tldD [Escherichia coli KTE220]
gi|432515633|ref|ZP_19752849.1| protein tldD [Escherichia coli KTE224]
gi|432519438|ref|ZP_19756618.1| protein tldD [Escherichia coli KTE228]
gi|432525570|ref|ZP_19762689.1| protein tldD [Escherichia coli KTE230]
gi|432528081|ref|ZP_19765158.1| protein tldD [Escherichia coli KTE233]
gi|432535592|ref|ZP_19772552.1| protein tldD [Escherichia coli KTE234]
gi|432539596|ref|ZP_19776490.1| protein tldD [Escherichia coli KTE235]
gi|432544982|ref|ZP_19781817.1| protein tldD [Escherichia coli KTE236]
gi|432550464|ref|ZP_19787224.1| protein tldD [Escherichia coli KTE237]
gi|432555306|ref|ZP_19792025.1| protein tldD [Escherichia coli KTE47]
gi|432565616|ref|ZP_19802178.1| protein tldD [Escherichia coli KTE51]
gi|432570466|ref|ZP_19806973.1| protein tldD [Escherichia coli KTE53]
gi|432575437|ref|ZP_19811911.1| protein tldD [Escherichia coli KTE55]
gi|432577478|ref|ZP_19813928.1| protein tldD [Escherichia coli KTE56]
gi|432581565|ref|ZP_19817979.1| protein tldD [Escherichia coli KTE57]
gi|432589621|ref|ZP_19825974.1| protein tldD [Escherichia coli KTE58]
gi|432594437|ref|ZP_19830750.1| protein tldD [Escherichia coli KTE60]
gi|432599489|ref|ZP_19835760.1| protein tldD [Escherichia coli KTE62]
gi|432604077|ref|ZP_19840308.1| protein tldD [Escherichia coli KTE66]
gi|432609277|ref|ZP_19845459.1| protein tldD [Escherichia coli KTE67]
gi|432613248|ref|ZP_19849406.1| protein tldD [Escherichia coli KTE72]
gi|432618487|ref|ZP_19854592.1| protein tldD [Escherichia coli KTE75]
gi|432623605|ref|ZP_19859624.1| protein tldD [Escherichia coli KTE76]
gi|432628878|ref|ZP_19864848.1| protein tldD [Escherichia coli KTE77]
gi|432633116|ref|ZP_19869037.1| protein tldD [Escherichia coli KTE80]
gi|432638452|ref|ZP_19874318.1| protein tldD [Escherichia coli KTE81]
gi|432642806|ref|ZP_19878632.1| protein tldD [Escherichia coli KTE83]
gi|432647915|ref|ZP_19883701.1| protein tldD [Escherichia coli KTE86]
gi|432652835|ref|ZP_19888581.1| protein tldD [Escherichia coli KTE87]
gi|432657478|ref|ZP_19893175.1| protein tldD [Escherichia coli KTE93]
gi|432662455|ref|ZP_19898091.1| protein tldD [Escherichia coli KTE111]
gi|432667803|ref|ZP_19903376.1| protein tldD [Escherichia coli KTE116]
gi|432672336|ref|ZP_19907860.1| protein tldD [Escherichia coli KTE119]
gi|432676367|ref|ZP_19911816.1| protein tldD [Escherichia coli KTE142]
gi|432681970|ref|ZP_19917329.1| protein tldD [Escherichia coli KTE143]
gi|432687064|ref|ZP_19922355.1| protein tldD [Escherichia coli KTE156]
gi|432688521|ref|ZP_19923792.1| protein tldD [Escherichia coli KTE161]
gi|432700759|ref|ZP_19935904.1| protein tldD [Escherichia coli KTE169]
gi|432705985|ref|ZP_19941081.1| protein tldD [Escherichia coli KTE171]
gi|432715090|ref|ZP_19950118.1| protein tldD [Escherichia coli KTE8]
gi|432724708|ref|ZP_19959622.1| protein tldD [Escherichia coli KTE17]
gi|432729291|ref|ZP_19964166.1| protein tldD [Escherichia coli KTE18]
gi|432733994|ref|ZP_19968819.1| protein tldD [Escherichia coli KTE45]
gi|432738729|ref|ZP_19973481.1| protein tldD [Escherichia coli KTE42]
gi|432742978|ref|ZP_19977693.1| protein tldD [Escherichia coli KTE23]
gi|432747221|ref|ZP_19981883.1| protein tldD [Escherichia coli KTE43]
gi|432756171|ref|ZP_19990716.1| protein tldD [Escherichia coli KTE22]
gi|432761080|ref|ZP_19995570.1| protein tldD [Escherichia coli KTE46]
gi|432766644|ref|ZP_20001060.1| protein tldD [Escherichia coli KTE48]
gi|432776321|ref|ZP_20010584.1| protein tldD [Escherichia coli KTE54]
gi|432780251|ref|ZP_20014472.1| protein tldD [Escherichia coli KTE59]
gi|432785209|ref|ZP_20019387.1| protein tldD [Escherichia coli KTE63]
gi|432789244|ref|ZP_20023372.1| protein tldD [Escherichia coli KTE65]
gi|432794463|ref|ZP_20028545.1| protein tldD [Escherichia coli KTE78]
gi|432795980|ref|ZP_20030021.1| protein tldD [Escherichia coli KTE79]
gi|432803425|ref|ZP_20037378.1| protein tldD [Escherichia coli KTE84]
gi|432807500|ref|ZP_20041415.1| protein tldD [Escherichia coli KTE91]
gi|432810971|ref|ZP_20044830.1| protein tldD [Escherichia coli KTE101]
gi|432817013|ref|ZP_20050774.1| protein tldD [Escherichia coli KTE115]
gi|432822679|ref|ZP_20056368.1| protein tldD [Escherichia coli KTE118]
gi|432824134|ref|ZP_20057804.1| protein tldD [Escherichia coli KTE123]
gi|432828875|ref|ZP_20062493.1| protein tldD [Escherichia coli KTE135]
gi|432836200|ref|ZP_20069733.1| protein tldD [Escherichia coli KTE136]
gi|432841051|ref|ZP_20074511.1| protein tldD [Escherichia coli KTE140]
gi|432846285|ref|ZP_20078966.1| protein tldD [Escherichia coli KTE141]
gi|432854383|ref|ZP_20082928.1| protein tldD [Escherichia coli KTE144]
gi|432865150|ref|ZP_20088398.1| protein tldD [Escherichia coli KTE146]
gi|432870701|ref|ZP_20091158.1| protein tldD [Escherichia coli KTE147]
gi|432877237|ref|ZP_20095035.1| protein tldD [Escherichia coli KTE154]
gi|432888544|ref|ZP_20102296.1| protein tldD [Escherichia coli KTE158]
gi|432890613|ref|ZP_20103545.1| protein tldD [Escherichia coli KTE165]
gi|432900466|ref|ZP_20110888.1| protein tldD [Escherichia coli KTE192]
gi|432906885|ref|ZP_20115424.1| protein tldD [Escherichia coli KTE194]
gi|432914733|ref|ZP_20120149.1| protein tldD [Escherichia coli KTE190]
gi|432936426|ref|ZP_20135560.1| protein tldD [Escherichia coli KTE184]
gi|432939864|ref|ZP_20137967.1| protein tldD [Escherichia coli KTE183]
gi|432949305|ref|ZP_20144228.1| protein tldD [Escherichia coli KTE196]
gi|432957003|ref|ZP_20148606.1| protein tldD [Escherichia coli KTE197]
gi|432969307|ref|ZP_20158219.1| protein tldD [Escherichia coli KTE203]
gi|432973516|ref|ZP_20162362.1| protein tldD [Escherichia coli KTE207]
gi|432975444|ref|ZP_20164279.1| protein tldD [Escherichia coli KTE209]
gi|432992342|ref|ZP_20181001.1| protein tldD [Escherichia coli KTE217]
gi|432997004|ref|ZP_20185587.1| protein tldD [Escherichia coli KTE218]
gi|433001600|ref|ZP_20190119.1| protein tldD [Escherichia coli KTE223]
gi|433006823|ref|ZP_20195247.1| protein tldD [Escherichia coli KTE227]
gi|433009438|ref|ZP_20197851.1| protein tldD [Escherichia coli KTE229]
gi|433015543|ref|ZP_20203878.1| protein tldD [Escherichia coli KTE104]
gi|433020371|ref|ZP_20208537.1| protein tldD [Escherichia coli KTE105]
gi|433025108|ref|ZP_20213082.1| protein tldD [Escherichia coli KTE106]
gi|433030153|ref|ZP_20218005.1| protein tldD [Escherichia coli KTE109]
gi|433035130|ref|ZP_20222829.1| protein tldD [Escherichia coli KTE112]
gi|433040240|ref|ZP_20227833.1| protein tldD [Escherichia coli KTE113]
gi|433044783|ref|ZP_20232270.1| protein tldD [Escherichia coli KTE117]
gi|433049685|ref|ZP_20237021.1| protein tldD [Escherichia coli KTE120]
gi|433054874|ref|ZP_20242041.1| protein tldD [Escherichia coli KTE122]
gi|433059724|ref|ZP_20246761.1| protein tldD [Escherichia coli KTE124]
gi|433069559|ref|ZP_20256334.1| protein tldD [Escherichia coli KTE128]
gi|433074494|ref|ZP_20261136.1| protein tldD [Escherichia coli KTE129]
gi|433079429|ref|ZP_20265949.1| protein tldD [Escherichia coli KTE131]
gi|433084168|ref|ZP_20270616.1| protein tldD [Escherichia coli KTE133]
gi|433088893|ref|ZP_20275259.1| protein tldD [Escherichia coli KTE137]
gi|433093627|ref|ZP_20279884.1| protein tldD [Escherichia coli KTE138]
gi|433112474|ref|ZP_20298330.1| protein tldD [Escherichia coli KTE150]
gi|433117119|ref|ZP_20302905.1| protein tldD [Escherichia coli KTE153]
gi|433121806|ref|ZP_20307467.1| protein tldD [Escherichia coli KTE157]
gi|433126807|ref|ZP_20312354.1| protein tldD [Escherichia coli KTE160]
gi|433131799|ref|ZP_20317229.1| protein tldD [Escherichia coli KTE163]
gi|433136486|ref|ZP_20321820.1| protein tldD [Escherichia coli KTE166]
gi|433140871|ref|ZP_20326117.1| protein tldD [Escherichia coli KTE167]
gi|433145846|ref|ZP_20330980.1| protein tldD [Escherichia coli KTE168]
gi|433150876|ref|ZP_20335877.1| protein tldD [Escherichia coli KTE174]
gi|433155388|ref|ZP_20340321.1| protein tldD [Escherichia coli KTE176]
gi|433160351|ref|ZP_20345178.1| protein tldD [Escherichia coli KTE177]
gi|433165229|ref|ZP_20349960.1| protein tldD [Escherichia coli KTE179]
gi|433170205|ref|ZP_20354828.1| protein tldD [Escherichia coli KTE180]
gi|433175131|ref|ZP_20359645.1| protein tldD [Escherichia coli KTE232]
gi|433180071|ref|ZP_20364457.1| protein tldD [Escherichia coli KTE82]
gi|433184957|ref|ZP_20369195.1| protein tldD [Escherichia coli KTE85]
gi|433190047|ref|ZP_20374136.1| protein tldD [Escherichia coli KTE88]
gi|433195284|ref|ZP_20379263.1| protein tldD [Escherichia coli KTE90]
gi|433199987|ref|ZP_20383875.1| protein tldD [Escherichia coli KTE94]
gi|433204967|ref|ZP_20388718.1| protein tldD [Escherichia coli KTE95]
gi|433209366|ref|ZP_20393034.1| protein tldD [Escherichia coli KTE97]
gi|433214217|ref|ZP_20397800.1| protein tldD [Escherichia coli KTE99]
gi|433325364|ref|ZP_20402477.1| protease TldD [Escherichia coli J96]
gi|442593074|ref|ZP_21011030.1| TldD protein, part of TldE/TldD proteolytic complex [Escherichia
coli O10:K5(L):H4 str. ATCC 23506]
gi|442597306|ref|ZP_21015102.1| TldD protein, part of TldE/TldD proteolytic complex [Escherichia
coli O5:K4(L):H4 str. ATCC 23502]
gi|442605440|ref|ZP_21020272.1| TldD protein, part of TldE/TldD proteolytic complex [Escherichia
coli Nissle 1917]
gi|443619312|ref|YP_007383168.1| protease TldD [Escherichia coli APEC O78]
gi|450193342|ref|ZP_21891999.1| tldD [Escherichia coli SEPT362]
gi|450222804|ref|ZP_21896959.1| tldD [Escherichia coli O08]
gi|450250784|ref|ZP_21901717.1| tldD [Escherichia coli S17]
gi|84028913|sp|P0AGG9.1|TLDD_ECOL6 RecName: Full=Protein TldD
gi|84028914|sp|P0AGG8.1|TLDD_ECOLI RecName: Full=Protein TldD
gi|84028915|sp|P0AGH0.1|TLDD_SHIFL RecName: Full=Protein TldD
gi|26110253|gb|AAN82439.1|AE016767_199 TldD protein [Escherichia coli CFT073]
gi|606183|gb|AAA58046.1| ORF_f481 [Escherichia coli str. K-12 substr. MG1655]
gi|1732437|dbj|BAA07913.1| TldD protein [Escherichia coli]
gi|1789640|gb|AAC76276.1| putative peptidase [Escherichia coli str. K-12 substr. MG1655]
gi|24053721|gb|AAN44747.1| suppressor of inhibition by CsrA [Shigella flexneri 2a str. 301]
gi|30042835|gb|AAP18558.1| suppressor of inhibition by CsrA [Shigella flexneri 2a str. 2457T]
gi|85676037|dbj|BAE77287.1| predicted peptidase [Escherichia coli str. K12 substr. W3110]
gi|91074238|gb|ABE09119.1| csrA activity inhibitor TldD [Escherichia coli UTI89]
gi|110345071|gb|ABG71308.1| suppresses inhibitory activity of CsrA (TldD protein) [Escherichia
coli 536]
gi|110616654|gb|ABF05321.1| suppresses inhibitory activity of CsrA [Shigella flexneri 5 str.
8401]
gi|115514652|gb|ABJ02727.1| suppresses inhibitory activity of CsrA [Escherichia coli APEC O1]
gi|157068402|gb|ABV07657.1| protein TldD [Escherichia coli HS]
gi|157081237|gb|ABV20945.1| protein TldD [Escherichia coli E24377A]
gi|169753440|gb|ACA76139.1| peptidase U62 modulator of DNA gyrase [Escherichia coli ATCC 8739]
gi|169890610|gb|ACB04317.1| predicted peptidase [Escherichia coli str. K-12 substr. DH10B]
gi|170518159|gb|ACB16337.1| protein TldD [Escherichia coli SMS-3-5]
gi|188491307|gb|EDU66410.1| protein TldD [Escherichia coli 53638]
gi|190901796|gb|EDV61549.1| protein TldD [Escherichia coli B7A]
gi|190905874|gb|EDV65492.1| protein TldD [Escherichia coli F11]
gi|192927012|gb|EDV81635.1| protein TldD [Escherichia coli E22]
gi|192956347|gb|EDV86807.1| protein TldD [Escherichia coli E110019]
gi|194412854|gb|EDX29146.1| protein TldD [Escherichia coli B171]
gi|194416866|gb|EDX32989.1| protein TldD [Shigella dysenteriae 1012]
gi|194421882|gb|EDX37888.1| protein TldD [Escherichia coli 101-1]
gi|209913973|dbj|BAG79047.1| putative modulator of DNA gyrase [Escherichia coli SE11]
gi|215266625|emb|CAS11064.1| predicted peptidase [Escherichia coli O127:H6 str. E2348/69]
gi|218353675|emb|CAU99917.1| putative peptidase [Escherichia coli 55989]
gi|218362576|emb|CAR00200.1| putative peptidase [Escherichia coli IAI1]
gi|218371995|emb|CAR19851.1| putative peptidase [Escherichia coli IAI39]
gi|218429090|emb|CAR10034.2| putative peptidase [Escherichia coli ED1a]
gi|218433955|emb|CAR14872.1| putative peptidase [Escherichia coli UMN026]
gi|222034954|emb|CAP77697.1| Protein tldD [Escherichia coli LF82]
gi|226840028|gb|EEH72049.1| protein tldD [Escherichia sp. 1_1_43]
gi|226899049|gb|EEH85308.1| protease TldD [Escherichia sp. 3_2_53FAA]
gi|227835355|gb|EEJ45821.1| possible peptidase [Escherichia coli 83972]
gi|238862788|gb|ACR64786.1| predicted peptidase [Escherichia coli BW2952]
gi|242378781|emb|CAQ33572.1| protease involved in Microcin B17 maturation and in sensitivity to
the DNA gyrase inhibitor LetD [Escherichia coli
BL21(DE3)]
gi|253322970|gb|ACT27572.1| protease TldD [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253975082|gb|ACT40753.1| predicted peptidase [Escherichia coli B str. REL606]
gi|253979238|gb|ACT44908.1| predicted peptidase [Escherichia coli BL21(DE3)]
gi|257761198|dbj|BAI32695.1| predicted peptidase TldD [Escherichia coli O103:H2 str. 12009]
gi|257766344|dbj|BAI37839.1| predicted peptidase TldD [Escherichia coli O111:H- str. 11128]
gi|260447728|gb|ACX38150.1| peptidase U62 modulator of DNA gyrase [Escherichia coli DH1]
gi|281602622|gb|ADA75606.1| Suppresses inhibitory activity of CsrA [Shigella flexneri 2002017]
gi|284923260|emb|CBG36354.1| TldD protein [Escherichia coli 042]
gi|291322659|gb|EFE62088.1| tldD [Escherichia coli B088]
gi|291426853|gb|EFE99885.1| tldD [Escherichia coli FVEC1412]
gi|291432024|gb|EFF05007.1| tldD [Escherichia coli B185]
gi|291469383|gb|EFF11874.1| tldD [Escherichia coli B354]
gi|294492288|gb|ADE91044.1| protein TldD [Escherichia coli IHE3034]
gi|298277728|gb|EFI19244.1| tldD [Escherichia coli FVEC1302]
gi|299878264|gb|EFI86475.1| TldD protein [Escherichia coli MS 196-1]
gi|300300255|gb|EFJ56640.1| TldD protein [Escherichia coli MS 185-1]
gi|300307961|gb|EFJ62481.1| TldD protein [Escherichia coli MS 200-1]
gi|300314634|gb|EFJ64418.1| TldD protein [Escherichia coli MS 175-1]
gi|300358282|gb|EFJ74152.1| TldD protein [Escherichia coli MS 198-1]
gi|300403599|gb|EFJ87137.1| TldD protein [Escherichia coli MS 84-1]
gi|300406950|gb|EFJ90488.1| TldD protein [Escherichia coli MS 45-1]
gi|300417957|gb|EFK01268.1| TldD protein [Escherichia coli MS 182-1]
gi|300450283|gb|EFK13903.1| TldD protein [Escherichia coli MS 116-1]
gi|300457577|gb|EFK21070.1| TldD protein [Escherichia coli MS 21-1]
gi|300462162|gb|EFK25655.1| TldD protein [Escherichia coli MS 187-1]
gi|300523125|gb|EFK44194.1| TldD protein [Escherichia coli MS 119-7]
gi|300529802|gb|EFK50864.1| TldD protein [Escherichia coli MS 107-1]
gi|300840418|gb|EFK68178.1| TldD protein [Escherichia coli MS 124-1]
gi|301076209|gb|EFK91015.1| TldD protein [Escherichia coli MS 146-1]
gi|305849986|gb|EFM50445.1| protease TldD [Escherichia coli NC101]
gi|306906968|gb|EFN37476.1| peptidase U62 modulator of DNA gyrase [Escherichia coli W]
gi|307555330|gb|ADN48105.1| suppresses inhibitory activity of CsrA [Escherichia coli ABU 83972]
gi|307625163|gb|ADN69467.1| protease TldD [Escherichia coli UM146]
gi|308122778|gb|EFO60040.1| TldD protein [Escherichia coli MS 145-7]
gi|309703665|emb|CBJ03006.1| TldD protein [Escherichia coli ETEC H10407]
gi|310334863|gb|EFQ01068.1| modulator of DNA gyrase family protein [Escherichia coli 1827-70]
gi|312286643|gb|EFR14554.1| modulator of DNA gyrase family protein [Escherichia coli 2362-75]
gi|312947794|gb|ADR28621.1| protease TldD [Escherichia coli O83:H1 str. NRG 857C]
gi|313648513|gb|EFS12955.1| modulator of DNA gyrase family protein [Shigella flexneri 2a str.
2457T]
gi|315062544|gb|ADT76871.1| predicted peptidase [Escherichia coli W]
gi|315137829|dbj|BAJ44988.1| tldD [Escherichia coli DH1]
gi|315257169|gb|EFU37137.1| TldD protein [Escherichia coli MS 85-1]
gi|315294784|gb|EFU54127.1| TldD protein [Escherichia coli MS 153-1]
gi|315300895|gb|EFU60115.1| TldD protein [Escherichia coli MS 16-3]
gi|315617055|gb|EFU97665.1| modulator of DNA gyrase family protein [Escherichia coli 3431]
gi|320194721|gb|EFW69351.1| protease TldD [Escherichia coli WV_060327]
gi|320202154|gb|EFW76729.1| protease TldD [Escherichia coli EC4100B]
gi|323162931|gb|EFZ48766.1| modulator of DNA gyrase family protein [Escherichia coli E128010]
gi|323173498|gb|EFZ59127.1| modulator of DNA gyrase family protein [Escherichia coli LT-68]
gi|323178586|gb|EFZ64162.1| modulator of DNA gyrase family protein [Escherichia coli OK1180]
gi|323189143|gb|EFZ74427.1| modulator of DNA gyrase family protein [Escherichia coli RN587/1]
gi|323376868|gb|ADX49136.1| peptidase U62 modulator of DNA gyrase [Escherichia coli KO11FL]
gi|323936218|gb|EGB32511.1| TldD protein [Escherichia coli E1520]
gi|323941662|gb|EGB37841.1| TldD protein [Escherichia coli E482]
gi|323946908|gb|EGB42924.1| TldD protein [Escherichia coli H120]
gi|323951244|gb|EGB47119.1| TldD protein [Escherichia coli H252]
gi|323957615|gb|EGB53329.1| TldD protein [Escherichia coli H263]
gi|323961107|gb|EGB56721.1| TldD protein [Escherichia coli H489]
gi|323966423|gb|EGB61857.1| TldD protein [Escherichia coli M863]
gi|323970340|gb|EGB65610.1| TldD protein [Escherichia coli TA007]
gi|323979045|gb|EGB74123.1| TldD protein [Escherichia coli TW10509]
gi|324009061|gb|EGB78280.1| TldD protein [Escherichia coli MS 57-2]
gi|324015839|gb|EGB85058.1| TldD protein [Escherichia coli MS 60-1]
gi|324018383|gb|EGB87602.1| TldD protein [Escherichia coli MS 117-3]
gi|324119603|gb|EGC13485.1| TldD protein [Escherichia coli E1167]
gi|327251337|gb|EGE63026.1| modulator of DNA gyrase family protein [Escherichia coli STEC_7v]
gi|331037414|gb|EGI09638.1| TldD protein [Escherichia coli H736]
gi|331048224|gb|EGI20301.1| TldD protein [Escherichia coli M718]
gi|331054106|gb|EGI26135.1| TldD protein [Escherichia coli TA206]
gi|331058100|gb|EGI30082.1| TldD protein [Escherichia coli TA143]
gi|331062980|gb|EGI34894.1| TldD protein [Escherichia coli TA271]
gi|331068200|gb|EGI39596.1| TldD protein [Escherichia coli TA280]
gi|331073383|gb|EGI44706.1| TldD protein [Escherichia coli H591]
gi|331078500|gb|EGI49706.1| TldD protein [Escherichia coli H299]
gi|332086508|gb|EGI91655.1| modulator of DNA gyrase family protein [Shigella dysenteriae
155-74]
gi|332087236|gb|EGI92369.1| modulator of DNA gyrase family protein [Shigella boydii 5216-82]
gi|332102279|gb|EGJ05625.1| tldD [Shigella sp. D9]
gi|332345200|gb|AEE58534.1| modulator of DNA gyrase [Escherichia coli UMNK88]
gi|332752407|gb|EGJ82797.1| modulator of DNA gyrase family protein [Shigella flexneri 4343-70]
gi|332752448|gb|EGJ82837.1| modulator of DNA gyrase family protein [Shigella flexneri K-671]
gi|332754428|gb|EGJ84794.1| modulator of DNA gyrase family protein [Shigella flexneri 2747-71]
gi|332765244|gb|EGJ95471.1| modulator of DNA gyrase family protein [Shigella flexneri 2930-71]
gi|332999321|gb|EGK18907.1| modulator of DNA gyrase family protein [Shigella flexneri K-272]
gi|333000174|gb|EGK19757.1| modulator of DNA gyrase family protein [Shigella flexneri K-218]
gi|333014564|gb|EGK33911.1| modulator of DNA gyrase family protein [Shigella flexneri K-304]
gi|333014690|gb|EGK34036.1| modulator of DNA gyrase family protein [Shigella flexneri K-227]
gi|339416973|gb|AEJ58645.1| modulator of DNA gyrase family protein [Escherichia coli UMNF18]
gi|340732779|gb|EGR61915.1| protease TldD [Escherichia coli O104:H4 str. 01-09591]
gi|340738345|gb|EGR72594.1| protease TldD [Escherichia coli O104:H4 str. LB226692]
gi|341919344|gb|EGT68956.1| hypothetical protein C22711_2986 [Escherichia coli O104:H4 str.
C227-11]
gi|342361906|gb|EGU26034.1| protease TldD [Escherichia coli XH140A]
gi|342928367|gb|EGU97089.1| TldD protein [Escherichia coli MS 79-10]
gi|344192152|gb|EGV46250.1| protease TldD [Escherichia coli XH001]
gi|345333240|gb|EGW65692.1| modulator of DNA gyrase family protein [Escherichia coli
STEC_C165-02]
gi|345333963|gb|EGW66409.1| modulator of DNA gyrase family protein [Escherichia coli 2534-86]
gi|345336314|gb|EGW68751.1| modulator of DNA gyrase family protein [Escherichia coli STEC_B2F1]
gi|345348151|gb|EGW80449.1| modulator of DNA gyrase family protein [Escherichia coli STEC_94C]
gi|345349518|gb|EGW81799.1| modulator of DNA gyrase family protein [Escherichia coli 3030-1]
gi|345355609|gb|EGW87819.1| modulator of DNA gyrase family protein [Escherichia coli
STEC_DG131-3]
gi|345371093|gb|EGX03067.1| modulator of DNA gyrase family protein [Escherichia coli
STEC_MHI813]
gi|345372105|gb|EGX04071.1| modulator of DNA gyrase family protein [Escherichia coli G58-1]
gi|345373818|gb|EGX05773.1| modulator of DNA gyrase family protein [Escherichia coli
STEC_H.1.8]
gi|345386055|gb|EGX15892.1| modulator of DNA gyrase family protein [Escherichia coli
STEC_S1191]
gi|345391620|gb|EGX21407.1| modulator of DNA gyrase family protein [Escherichia coli TX1999]
gi|349739783|gb|AEQ14489.1| putative peptidase [Escherichia coli O7:K1 str. CE10]
gi|354860602|gb|EHF21048.1| protein tldD [Escherichia coli O104:H4 str. C236-11]
gi|354863920|gb|EHF24351.1| protein tldD [Escherichia coli O104:H4 str. C227-11]
gi|354865834|gb|EHF26262.1| protein tldD [Escherichia coli O104:H4 str. 04-8351]
gi|354872258|gb|EHF32653.1| protein tldD [Escherichia coli O104:H4 str. 09-7901]
gi|354878601|gb|EHF38950.1| protein tldD [Escherichia coli O104:H4 str. 11-3677]
gi|354887144|gb|EHF47421.1| protein tldD [Escherichia coli O104:H4 str. 11-4404]
gi|354891034|gb|EHF51270.1| protein tldD [Escherichia coli O104:H4 str. 11-4522]
gi|354895449|gb|EHF55636.1| protein tldD [Escherichia coli O104:H4 str. 11-4623]
gi|354906933|gb|EHF67004.1| protein tldD [Escherichia coli O104:H4 str. 11-4632 C1]
gi|354909956|gb|EHF69986.1| protein tldD [Escherichia coli O104:H4 str. 11-4632 C2]
gi|354912041|gb|EHF72043.1| protein tldD [Escherichia coli O104:H4 str. 11-4632 C3]
gi|354914790|gb|EHF74772.1| protein tldD [Escherichia coli O104:H4 str. 11-4632 C4]
gi|354922138|gb|EHF82056.1| protein tldD [Escherichia coli O104:H4 str. 11-4632 C5]
gi|355350403|gb|EHF99603.1| peptidase [Escherichia coli cloneA_i1]
gi|355422019|gb|AER86216.1| protease TldD [Escherichia coli str. 'clone D i2']
gi|355426939|gb|AER91135.1| protease TldD [Escherichia coli str. 'clone D i14']
gi|359333436|dbj|BAL39883.1| predicted peptidase [Escherichia coli str. K-12 substr. MDS42]
gi|371594389|gb|EHN83257.1| protein tldD [Escherichia coli H494]
gi|371604992|gb|EHN93616.1| tldD [Escherichia coli H397]
gi|371606273|gb|EHN94870.1| tldD [Escherichia coli E101]
gi|371616369|gb|EHO04734.1| tldD [Escherichia coli B093]
gi|373246398|gb|EHP65852.1| protein tldD [Escherichia coli 4_1_47FAA]
gi|375320759|gb|EHS66674.1| protease TldD [Escherichia coli O157:H43 str. T22]
gi|377840855|gb|EHU05925.1| modulator of DNA gyrase family protein [Escherichia coli DEC1A]
gi|377841473|gb|EHU06539.1| modulator of DNA gyrase family protein [Escherichia coli DEC1C]
gi|377844642|gb|EHU09678.1| modulator of DNA gyrase family protein [Escherichia coli DEC1B]
gi|377854756|gb|EHU19633.1| modulator of DNA gyrase family protein [Escherichia coli DEC1D]
gi|377857955|gb|EHU22803.1| modulator of DNA gyrase family protein [Escherichia coli DEC1E]
gi|377861423|gb|EHU26243.1| modulator of DNA gyrase family protein [Escherichia coli DEC2A]
gi|377871889|gb|EHU36547.1| modulator of DNA gyrase family protein [Escherichia coli DEC2B]
gi|377874626|gb|EHU39253.1| modulator of DNA gyrase family protein [Escherichia coli DEC2C]
gi|377876928|gb|EHU41527.1| modulator of DNA gyrase family protein [Escherichia coli DEC2D]
gi|377887197|gb|EHU51675.1| modulator of DNA gyrase family protein [Escherichia coli DEC2E]
gi|377990571|gb|EHV53729.1| modulator of DNA gyrase family protein [Escherichia coli DEC6A]
gi|377991363|gb|EHV54514.1| modulator of DNA gyrase family protein [Escherichia coli DEC6B]
gi|377994679|gb|EHV57805.1| modulator of DNA gyrase family protein [Escherichia coli DEC6C]
gi|378005106|gb|EHV68113.1| modulator of DNA gyrase family protein [Escherichia coli DEC6D]
gi|378007735|gb|EHV70701.1| modulator of DNA gyrase family protein [Escherichia coli DEC6E]
gi|378013120|gb|EHV76042.1| modulator of DNA gyrase family protein [Escherichia coli DEC7A]
gi|378021931|gb|EHV84626.1| modulator of DNA gyrase family protein [Escherichia coli DEC7C]
gi|378026011|gb|EHV88651.1| modulator of DNA gyrase family protein [Escherichia coli DEC7D]
gi|378030864|gb|EHV93457.1| modulator of DNA gyrase family protein [Escherichia coli DEC7B]
gi|378036137|gb|EHV98684.1| modulator of DNA gyrase family protein [Escherichia coli DEC7E]
gi|378044547|gb|EHW06964.1| modulator of DNA gyrase family protein [Escherichia coli DEC8A]
gi|378051137|gb|EHW13456.1| modulator of DNA gyrase family protein [Escherichia coli DEC8B]
gi|378062822|gb|EHW24997.1| modulator of DNA gyrase family protein [Escherichia coli DEC8E]
gi|378070431|gb|EHW32510.1| modulator of DNA gyrase family protein [Escherichia coli DEC9A]
gi|378074955|gb|EHW36983.1| modulator of DNA gyrase family protein [Escherichia coli DEC9B]
gi|378080809|gb|EHW42766.1| modulator of DNA gyrase family protein [Escherichia coli DEC9C]
gi|378088302|gb|EHW50157.1| modulator of DNA gyrase family protein [Escherichia coli DEC9D]
gi|378091584|gb|EHW53414.1| modulator of DNA gyrase family protein [Escherichia coli DEC9E]
gi|378125870|gb|EHW87268.1| modulator of DNA gyrase family protein [Escherichia coli DEC10E]
gi|378127097|gb|EHW88489.1| modulator of DNA gyrase family protein [Escherichia coli DEC11A]
gi|378127286|gb|EHW88676.1| modulator of DNA gyrase family protein [Escherichia coli DEC10F]
gi|378139433|gb|EHX00673.1| modulator of DNA gyrase family protein [Escherichia coli DEC11B]
gi|378145986|gb|EHX07141.1| modulator of DNA gyrase family protein [Escherichia coli DEC11D]
gi|378147945|gb|EHX09090.1| modulator of DNA gyrase family protein [Escherichia coli DEC11C]
gi|378156287|gb|EHX17339.1| modulator of DNA gyrase family protein [Escherichia coli DEC11E]
gi|378162633|gb|EHX23593.1| modulator of DNA gyrase family protein [Escherichia coli DEC12B]
gi|378166634|gb|EHX27556.1| modulator of DNA gyrase family protein [Escherichia coli DEC12A]
gi|378167669|gb|EHX28581.1| modulator of DNA gyrase family protein [Escherichia coli DEC12C]
gi|378180119|gb|EHX40821.1| modulator of DNA gyrase family protein [Escherichia coli DEC12D]
gi|378184230|gb|EHX44867.1| modulator of DNA gyrase family protein [Escherichia coli DEC12E]
gi|378184939|gb|EHX45575.1| modulator of DNA gyrase family protein [Escherichia coli DEC13A]
gi|378197270|gb|EHX57753.1| modulator of DNA gyrase family protein [Escherichia coli DEC13C]
gi|378197830|gb|EHX58306.1| modulator of DNA gyrase family protein [Escherichia coli DEC13B]
gi|378200789|gb|EHX61243.1| modulator of DNA gyrase family protein [Escherichia coli DEC13D]
gi|378210429|gb|EHX70783.1| modulator of DNA gyrase family protein [Escherichia coli DEC13E]
gi|378214528|gb|EHX74835.1| modulator of DNA gyrase family protein [Escherichia coli DEC14A]
gi|378216823|gb|EHX77107.1| modulator of DNA gyrase family protein [Escherichia coli DEC14B]
gi|378225218|gb|EHX85417.1| modulator of DNA gyrase family protein [Escherichia coli DEC14C]
gi|378229167|gb|EHX89313.1| modulator of DNA gyrase family protein [Escherichia coli DEC14D]
gi|378235650|gb|EHX95718.1| modulator of DNA gyrase family protein [Escherichia coli DEC15A]
gi|378241431|gb|EHY01398.1| modulator of DNA gyrase family protein [Escherichia coli DEC15B]
gi|378246034|gb|EHY05971.1| modulator of DNA gyrase family protein [Escherichia coli DEC15C]
gi|378253498|gb|EHY13376.1| modulator of DNA gyrase family protein [Escherichia coli DEC15D]
gi|378257566|gb|EHY17404.1| modulator of DNA gyrase family protein [Escherichia coli DEC15E]
gi|380346919|gb|EIA35209.1| protease TldD [Escherichia coli SCI-07]
gi|383104669|gb|AFG42178.1| Protein tldD [Escherichia coli P12b]
gi|383391321|gb|AFH16279.1| protease TldD [Escherichia coli KO11FL]
gi|383406837|gb|AFH13080.1| protease TldD [Escherichia coli W]
gi|383468543|gb|EID63564.1| protease TldD [Shigella flexneri 5a str. M90T]
gi|383476110|gb|EID68057.1| protease TldD [Escherichia coli W26]
gi|384380855|gb|EIE38720.1| protease TldD [Escherichia coli J53]
gi|385156499|gb|EIF18495.1| protease TldD [Escherichia coli O32:H37 str. P4]
gi|385538196|gb|EIF85061.1| protein tldD [Escherichia coli M919]
gi|385709912|gb|EIG46905.1| protein tldD [Escherichia coli B799]
gi|385710243|gb|EIG47235.1| protein tldD [Escherichia coli H730]
gi|386120722|gb|EIG69346.1| protein tldD [Escherichia sp. 4_1_40B]
gi|386139573|gb|EIG80728.1| TldD/PmbA family protein [Escherichia coli 1.2741]
gi|386152982|gb|EIH04271.1| TldD/PmbA family protein [Escherichia coli 5.0588]
gi|386157898|gb|EIH14236.1| TldD/PmbA family protein [Escherichia coli 97.0259]
gi|386162934|gb|EIH24730.1| TldD/PmbA family protein [Escherichia coli 1.2264]
gi|386166514|gb|EIH33034.1| TldD/PmbA family protein [Escherichia coli 96.0497]
gi|386173676|gb|EIH45688.1| TldD/PmbA family protein [Escherichia coli 99.0741]
gi|386176536|gb|EIH54015.1| TldD/PmbA family protein [Escherichia coli 3.2608]
gi|386183951|gb|EIH66698.1| TldD/PmbA family protein [Escherichia coli 93.0624]
gi|386188841|gb|EIH77630.1| TldD/PmbA family protein [Escherichia coli 4.0522]
gi|386195365|gb|EIH89600.1| TldD/PmbA family protein [Escherichia coli JB1-95]
gi|386201215|gb|EII00206.1| TldD/PmbA family protein [Escherichia coli 96.154]
gi|386207455|gb|EII11960.1| TldD/PmbA family protein [Escherichia coli 5.0959]
gi|386219437|gb|EII35901.1| TldD/PmbA family protein [Escherichia coli 4.0967]
gi|386222029|gb|EII44458.1| TldD/PmbA family protein [Escherichia coli 2.3916]
gi|386229983|gb|EII57338.1| TldD/PmbA family protein [Escherichia coli 3.3884]
gi|386236399|gb|EII68375.1| TldD/PmbA family protein [Escherichia coli 2.4168]
gi|386241127|gb|EII78045.1| TldD/PmbA family protein [Escherichia coli 3.2303]
gi|386246460|gb|EII88190.1| TldD/PmbA family protein [Escherichia coli 3003]
gi|386250670|gb|EII96837.1| TldD/PmbA family protein [Escherichia coli TW07793]
gi|386253670|gb|EIJ03360.1| TldD/PmbA family protein [Escherichia coli B41]
gi|388334010|gb|EIL00618.1| protease TldD [Escherichia coli O103:H25 str. CVM9340]
gi|388345510|gb|EIL11280.1| protease TldD [Escherichia coli O103:H2 str. CVM9450]
gi|388352557|gb|EIL17667.1| protease TldD [Escherichia coli O111:H8 str. CVM9570]
gi|388353551|gb|EIL18557.1| protease TldD [Escherichia coli O111:H8 str. CVM9574]
gi|388396059|gb|EIL57193.1| protease TldD [Escherichia coli 541-15]
gi|388405500|gb|EIL65930.1| protease TldD [Escherichia coli 576-1]
gi|388407113|gb|EIL67489.1| protease TldD [Escherichia coli 541-1]
gi|388407846|gb|EIL68208.1| protease TldD [Escherichia coli 75]
gi|388413593|gb|EIL73585.1| protease TldD [Escherichia coli HM605]
gi|388422267|gb|EIL81851.1| protease TldD [Escherichia coli CUMT8]
gi|391246621|gb|EIQ05882.1| modulator of DNA gyrase family protein [Shigella flexneri 2850-71]
gi|391263912|gb|EIQ22912.1| modulator of DNA gyrase family protein [Shigella flexneri K-404]
gi|391267387|gb|EIQ26324.1| modulator of DNA gyrase family protein [Shigella boydii 965-58]
gi|391303282|gb|EIQ61123.1| modulator of DNA gyrase family protein [Escherichia coli EPECa12]
gi|391310115|gb|EIQ67772.1| modulator of DNA gyrase family protein [Shigella flexneri 1235-66]
gi|391311034|gb|EIQ68684.1| modulator of DNA gyrase family protein [Escherichia coli EPEC
C342-62]
gi|394380664|gb|EJE58405.1| protease TldD [Escherichia coli O111:H8 str. CVM9634]
gi|394391426|gb|EJE68298.1| protease TldD [Escherichia coli O111:H8 str. CVM9602]
gi|397783973|gb|EJK94830.1| modulator of DNA gyrase family protein [Escherichia coli STEC_O31]
gi|397895351|gb|EJL11783.1| modulator of DNA gyrase family protein [Shigella flexneri 6603-63]
gi|406775853|gb|AFS55277.1| protease TldD [Escherichia coli O104:H4 str. 2009EL-2050]
gi|407052427|gb|AFS72478.1| protease TldD [Escherichia coli O104:H4 str. 2011C-3493]
gi|407067248|gb|AFS88295.1| protease TldD [Escherichia coli O104:H4 str. 2009EL-2071]
gi|408191094|gb|EKI16714.1| csrA activity inhibitor TldD [Escherichia coli TW15901]
gi|408198776|gb|EKI23989.1| csrA activity inhibitor TldD [Escherichia coli ARS4.2123]
gi|408199827|gb|EKI25017.1| csrA activity inhibitor TldD [Escherichia coli TW00353]
gi|408211008|gb|EKI35564.1| csrA activity inhibitor TldD [Escherichia coli 3006]
gi|408226408|gb|EKI50055.1| csrA activity inhibitor TldD [Escherichia coli N1]
gi|408341848|gb|EKJ56286.1| csrA activity inhibitor TldD [Escherichia coli 0.1288]
gi|408459865|gb|EKJ83645.1| protease TldD [Escherichia coli AD30]
gi|408565357|gb|EKK41444.1| csrA activity inhibitor TldD [Escherichia coli 8.0566]
gi|408566687|gb|EKK42754.1| modulator of DNA gyrase family protein [Escherichia coli 8.0569]
gi|412964624|emb|CCK48553.1| suppresses inhibitory activity of CsrA [Escherichia coli chi7122]
gi|412971212|emb|CCJ45867.1| suppresses inhibitory activity of CsrA [Escherichia coli]
gi|421947843|gb|EKU04900.1| tldD [Escherichia coli O111:H8 str. CFSAN001632]
gi|429346649|gb|EKY83428.1| protein tldD [Escherichia coli O104:H4 str. 11-02092]
gi|429356628|gb|EKY93303.1| protein tldD [Escherichia coli O104:H4 str. 11-02033-1]
gi|429357503|gb|EKY94176.1| protein tldD [Escherichia coli O104:H4 str. 11-02030]
gi|429372795|gb|EKZ09344.1| protein tldD [Escherichia coli O104:H4 str. 11-02093]
gi|429374736|gb|EKZ11275.1| protein tldD [Escherichia coli O104:H4 str. 11-02281]
gi|429378418|gb|EKZ14932.1| protein tldD [Escherichia coli O104:H4 str. 11-02318]
gi|429388598|gb|EKZ25023.1| protein tldD [Escherichia coli O104:H4 str. 11-02913]
gi|429391367|gb|EKZ27771.1| protein tldD [Escherichia coli O104:H4 str. 11-03439]
gi|429392376|gb|EKZ28777.1| protein tldD [Escherichia coli O104:H4 str. 11-03943]
gi|429402865|gb|EKZ39155.1| protein tldD [Escherichia coli O104:H4 str. 11-04080]
gi|429404061|gb|EKZ40341.1| protein tldD [Escherichia coli O104:H4 str. Ec11-9990]
gi|429407724|gb|EKZ43975.1| protein tldD [Escherichia coli O104:H4 str. Ec11-9450]
gi|429415171|gb|EKZ51341.1| protein tldD [Escherichia coli O104:H4 str. Ec11-4984]
gi|429418625|gb|EKZ54768.1| protein tldD [Escherichia coli O104:H4 str. Ec11-4986]
gi|429424892|gb|EKZ60990.1| protein tldD [Escherichia coli O104:H4 str. Ec11-4987]
gi|429429082|gb|EKZ65153.1| protein tldD [Escherichia coli O104:H4 str. Ec11-4988]
gi|429433745|gb|EKZ69776.1| protein tldD [Escherichia coli O104:H4 str. Ec11-5603]
gi|429435289|gb|EKZ71308.1| protein tldD [Escherichia coli O104:H4 str. Ec11-6006]
gi|429441031|gb|EKZ77005.1| protein tldD [Escherichia coli O104:H4 str. Ec11-5604]
gi|429445969|gb|EKZ81908.1| protein tldD [Escherichia coli O104:H4 str. Ec12-0465]
gi|429455734|gb|EKZ91589.1| protein tldD [Escherichia coli O104:H4 str. Ec12-0466]
gi|429459449|gb|EKZ95268.1| protein tldD [Escherichia coli O104:H4 str. Ec11-9941]
gi|430873472|gb|ELB97046.1| protein tldD [Escherichia coli KTE2]
gi|430874730|gb|ELB98286.1| protein tldD [Escherichia coli KTE4]
gi|430892035|gb|ELC14556.1| protein tldD [Escherichia coli KTE10]
gi|430896538|gb|ELC18773.1| protein tldD [Escherichia coli KTE12]
gi|430904467|gb|ELC26176.1| protein tldD [Escherichia coli KTE16]
gi|430906026|gb|ELC27634.1| protein tldD [Escherichia coli KTE15]
gi|430913795|gb|ELC34916.1| protein tldD [Escherichia coli KTE25]
gi|430915508|gb|ELC36587.1| protein tldD [Escherichia coli KTE21]
gi|430924005|gb|ELC44738.1| protein tldD [Escherichia coli KTE26]
gi|430928316|gb|ELC48867.1| protein tldD [Escherichia coli KTE28]
gi|430937162|gb|ELC57424.1| protein tldD [Escherichia coli KTE44]
gi|430951638|gb|ELC70858.1| protein tldD [Escherichia coli KTE187]
gi|430952541|gb|ELC71605.1| protein tldD [Escherichia coli KTE181]
gi|430961277|gb|ELC79324.1| protein tldD [Escherichia coli KTE188]
gi|430964932|gb|ELC82378.1| protein tldD [Escherichia coli KTE189]
gi|430971819|gb|ELC88828.1| protein tldD [Escherichia coli KTE191]
gi|430977912|gb|ELC94735.1| protein tldD [Escherichia coli KTE193]
gi|430980576|gb|ELC97336.1| protein tldD [Escherichia coli KTE201]
gi|430986514|gb|ELD03085.1| protein tldD [Escherichia coli KTE204]
gi|430992041|gb|ELD08440.1| protein tldD [Escherichia coli KTE205]
gi|430996374|gb|ELD12660.1| protein tldD [Escherichia coli KTE206]
gi|431002805|gb|ELD18312.1| protein tldD [Escherichia coli KTE208]
gi|431005074|gb|ELD20283.1| protein tldD [Escherichia coli KTE210]
gi|431014694|gb|ELD28402.1| protein tldD [Escherichia coli KTE212]
gi|431019072|gb|ELD32502.1| protein tldD [Escherichia coli KTE213]
gi|431021919|gb|ELD35240.1| protein tldD [Escherichia coli KTE214]
gi|431036257|gb|ELD47633.1| protein tldD [Escherichia coli KTE220]
gi|431039240|gb|ELD50126.1| protein tldD [Escherichia coli KTE224]
gi|431048677|gb|ELD58653.1| protein tldD [Escherichia coli KTE228]
gi|431049222|gb|ELD59186.1| protein tldD [Escherichia coli KTE230]
gi|431058265|gb|ELD67672.1| protein tldD [Escherichia coli KTE234]
gi|431061056|gb|ELD70376.1| protein tldD [Escherichia coli KTE233]
gi|431067455|gb|ELD76060.1| protein tldD [Escherichia coli KTE235]
gi|431072322|gb|ELD80074.1| protein tldD [Escherichia coli KTE236]
gi|431078076|gb|ELD85135.1| protein tldD [Escherichia coli KTE237]
gi|431082657|gb|ELD88971.1| protein tldD [Escherichia coli KTE47]
gi|431090508|gb|ELD96265.1| protein tldD [Escherichia coli KTE51]
gi|431098360|gb|ELE03683.1| protein tldD [Escherichia coli KTE53]
gi|431106020|gb|ELE10354.1| protein tldD [Escherichia coli KTE55]
gi|431113346|gb|ELE17016.1| protein tldD [Escherichia coli KTE56]
gi|431118979|gb|ELE21998.1| protein tldD [Escherichia coli KTE58]
gi|431121847|gb|ELE24716.1| protein tldD [Escherichia coli KTE57]
gi|431126839|gb|ELE29186.1| protein tldD [Escherichia coli KTE60]
gi|431129359|gb|ELE31535.1| protein tldD [Escherichia coli KTE62]
gi|431136377|gb|ELE38246.1| protein tldD [Escherichia coli KTE67]
gi|431138375|gb|ELE40211.1| protein tldD [Escherichia coli KTE66]
gi|431147431|gb|ELE48854.1| protein tldD [Escherichia coli KTE72]
gi|431152243|gb|ELE53201.1| protein tldD [Escherichia coli KTE75]
gi|431157211|gb|ELE57865.1| protein tldD [Escherichia coli KTE76]
gi|431161208|gb|ELE61693.1| protein tldD [Escherichia coli KTE77]
gi|431168245|gb|ELE68499.1| protein tldD [Escherichia coli KTE80]
gi|431169193|gb|ELE69422.1| protein tldD [Escherichia coli KTE81]
gi|431178543|gb|ELE78452.1| protein tldD [Escherichia coli KTE83]
gi|431179262|gb|ELE79169.1| protein tldD [Escherichia coli KTE86]
gi|431188563|gb|ELE88005.1| protein tldD [Escherichia coli KTE87]
gi|431188935|gb|ELE88376.1| protein tldD [Escherichia coli KTE93]
gi|431197533|gb|ELE96382.1| protein tldD [Escherichia coli KTE111]
gi|431198486|gb|ELE97309.1| protein tldD [Escherichia coli KTE116]
gi|431208566|gb|ELF06779.1| protein tldD [Escherichia coli KTE119]
gi|431211914|gb|ELF09868.1| protein tldD [Escherichia coli KTE142]
gi|431218140|gb|ELF15624.1| protein tldD [Escherichia coli KTE143]
gi|431220051|gb|ELF17439.1| protein tldD [Escherichia coli KTE156]
gi|431236423|gb|ELF31634.1| protein tldD [Escherichia coli KTE161]
gi|431241239|gb|ELF35686.1| protein tldD [Escherichia coli KTE169]
gi|431241769|gb|ELF36205.1| protein tldD [Escherichia coli KTE171]
gi|431253948|gb|ELF47426.1| protein tldD [Escherichia coli KTE8]
gi|431263642|gb|ELF55628.1| protein tldD [Escherichia coli KTE17]
gi|431271887|gb|ELF63006.1| protein tldD [Escherichia coli KTE18]
gi|431272902|gb|ELF64001.1| protein tldD [Escherichia coli KTE45]
gi|431280192|gb|ELF71121.1| protein tldD [Escherichia coli KTE42]
gi|431282136|gb|ELF73034.1| protein tldD [Escherichia coli KTE23]
gi|431290333|gb|ELF81058.1| protein tldD [Escherichia coli KTE43]
gi|431300446|gb|ELF89999.1| protein tldD [Escherichia coli KTE22]
gi|431306387|gb|ELF94700.1| protein tldD [Escherichia coli KTE46]
gi|431308183|gb|ELF96471.1| protein tldD [Escherichia coli KTE48]
gi|431316488|gb|ELG04298.1| protein tldD [Escherichia coli KTE54]
gi|431325494|gb|ELG12882.1| protein tldD [Escherichia coli KTE59]
gi|431328366|gb|ELG15686.1| protein tldD [Escherichia coli KTE63]
gi|431336244|gb|ELG23373.1| protein tldD [Escherichia coli KTE65]
gi|431338533|gb|ELG25620.1| protein tldD [Escherichia coli KTE78]
gi|431346282|gb|ELG33191.1| protein tldD [Escherichia coli KTE84]
gi|431350118|gb|ELG36946.1| protein tldD [Escherichia coli KTE79]
gi|431353942|gb|ELG40695.1| protein tldD [Escherichia coli KTE91]
gi|431360711|gb|ELG47313.1| protein tldD [Escherichia coli KTE101]
gi|431362014|gb|ELG48593.1| protein tldD [Escherichia coli KTE115]
gi|431366468|gb|ELG52966.1| protein tldD [Escherichia coli KTE118]
gi|431378659|gb|ELG63650.1| protein tldD [Escherichia coli KTE123]
gi|431382947|gb|ELG67090.1| protein tldD [Escherichia coli KTE136]
gi|431383729|gb|ELG67853.1| protein tldD [Escherichia coli KTE135]
gi|431387681|gb|ELG71505.1| protein tldD [Escherichia coli KTE140]
gi|431393795|gb|ELG77359.1| protein tldD [Escherichia coli KTE141]
gi|431398798|gb|ELG82218.1| protein tldD [Escherichia coli KTE144]
gi|431402907|gb|ELG86212.1| protein tldD [Escherichia coli KTE146]
gi|431409671|gb|ELG92846.1| protein tldD [Escherichia coli KTE147]
gi|431414999|gb|ELG97550.1| protein tldD [Escherichia coli KTE158]
gi|431418419|gb|ELH00823.1| protein tldD [Escherichia coli KTE154]
gi|431424239|gb|ELH06336.1| protein tldD [Escherichia coli KTE192]
gi|431429333|gb|ELH11263.1| protein tldD [Escherichia coli KTE194]
gi|431431738|gb|ELH13513.1| protein tldD [Escherichia coli KTE165]
gi|431436899|gb|ELH18413.1| protein tldD [Escherichia coli KTE190]
gi|431451439|gb|ELH31915.1| protein tldD [Escherichia coli KTE184]
gi|431455937|gb|ELH36292.1| protein tldD [Escherichia coli KTE196]
gi|431461534|gb|ELH41802.1| protein tldD [Escherichia coli KTE183]
gi|431465475|gb|ELH45585.1| protein tldD [Escherichia coli KTE197]
gi|431469017|gb|ELH48950.1| protein tldD [Escherichia coli KTE203]
gi|431479942|gb|ELH59675.1| protein tldD [Escherichia coli KTE207]
gi|431487510|gb|ELH67155.1| protein tldD [Escherichia coli KTE209]
gi|431492611|gb|ELH72212.1| protein tldD [Escherichia coli KTE217]
gi|431503799|gb|ELH82534.1| protein tldD [Escherichia coli KTE218]
gi|431505917|gb|ELH84522.1| protein tldD [Escherichia coli KTE223]
gi|431511515|gb|ELH89647.1| protein tldD [Escherichia coli KTE227]
gi|431522470|gb|ELH99705.1| protein tldD [Escherichia coli KTE229]
gi|431527433|gb|ELI04149.1| protein tldD [Escherichia coli KTE104]
gi|431528707|gb|ELI05414.1| protein tldD [Escherichia coli KTE105]
gi|431532506|gb|ELI09062.1| protein tldD [Escherichia coli KTE106]
gi|431541835|gb|ELI17274.1| protein tldD [Escherichia coli KTE109]
gi|431547870|gb|ELI22165.1| protein tldD [Escherichia coli KTE112]
gi|431549484|gb|ELI23565.1| protein tldD [Escherichia coli KTE113]
gi|431554528|gb|ELI28409.1| protein tldD [Escherichia coli KTE117]
gi|431562665|gb|ELI35957.1| protein tldD [Escherichia coli KTE120]
gi|431567051|gb|ELI40066.1| protein tldD [Escherichia coli KTE124]
gi|431567754|gb|ELI40747.1| protein tldD [Escherichia coli KTE122]
gi|431580614|gb|ELI53173.1| protein tldD [Escherichia coli KTE128]
gi|431584892|gb|ELI56867.1| protein tldD [Escherichia coli KTE129]
gi|431594632|gb|ELI64912.1| protein tldD [Escherichia coli KTE131]
gi|431598704|gb|ELI68492.1| protein tldD [Escherichia coli KTE133]
gi|431602800|gb|ELI72230.1| protein tldD [Escherichia coli KTE137]
gi|431608277|gb|ELI77625.1| protein tldD [Escherichia coli KTE138]
gi|431626344|gb|ELI94896.1| protein tldD [Escherichia coli KTE150]
gi|431632318|gb|ELJ00621.1| protein tldD [Escherichia coli KTE153]
gi|431639837|gb|ELJ07686.1| protein tldD [Escherichia coli KTE157]
gi|431641681|gb|ELJ09416.1| protein tldD [Escherichia coli KTE160]
gi|431644536|gb|ELJ12198.1| protein tldD [Escherichia coli KTE163]
gi|431654363|gb|ELJ21421.1| protein tldD [Escherichia coli KTE166]
gi|431657248|gb|ELJ24215.1| protein tldD [Escherichia coli KTE167]
gi|431659055|gb|ELJ25962.1| protein tldD [Escherichia coli KTE168]
gi|431668228|gb|ELJ34760.1| protein tldD [Escherichia coli KTE174]
gi|431671526|gb|ELJ37807.1| protein tldD [Escherichia coli KTE176]
gi|431675134|gb|ELJ41280.1| protein tldD [Escherichia coli KTE177]
gi|431684991|gb|ELJ50596.1| protein tldD [Escherichia coli KTE179]
gi|431686481|gb|ELJ52047.1| protein tldD [Escherichia coli KTE180]
gi|431689901|gb|ELJ55396.1| protein tldD [Escherichia coli KTE232]
gi|431698617|gb|ELJ63644.1| protein tldD [Escherichia coli KTE82]
gi|431703212|gb|ELJ67901.1| protein tldD [Escherichia coli KTE88]
gi|431703569|gb|ELJ68256.1| protein tldD [Escherichia coli KTE85]
gi|431713990|gb|ELJ78198.1| protein tldD [Escherichia coli KTE90]
gi|431717230|gb|ELJ81331.1| protein tldD [Escherichia coli KTE95]
gi|431718521|gb|ELJ82595.1| protein tldD [Escherichia coli KTE94]
gi|431728719|gb|ELJ92392.1| protein tldD [Escherichia coli KTE97]
gi|431732759|gb|ELJ96209.1| protein tldD [Escherichia coli KTE99]
gi|432346301|gb|ELL40786.1| protease TldD [Escherichia coli J96]
gi|441607230|emb|CCP96471.1| TldD protein, part of TldE/TldD proteolytic complex [Escherichia
coli O10:K5(L):H4 str. ATCC 23506]
gi|441654466|emb|CCQ01015.1| TldD protein, part of TldE/TldD proteolytic complex [Escherichia
coli O5:K4(L):H4 str. ATCC 23502]
gi|441713922|emb|CCQ06249.1| TldD protein, part of TldE/TldD proteolytic complex [Escherichia
coli Nissle 1917]
gi|443423820|gb|AGC88724.1| protease TldD [Escherichia coli APEC O78]
gi|449314766|gb|EMD04928.1| tldD [Escherichia coli O08]
gi|449315900|gb|EMD06028.1| tldD [Escherichia coli S17]
gi|449317849|gb|EMD07933.1| tldD [Escherichia coli SEPT362]
Length = 481
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 264/481 (54%), Positives = 359/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRAISG+KT F Y+D IS L + ++ R+I S +GK++ + ++ + L
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRDSGDGKVQTLGAVEH---SPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE++G+RE G SG GGR+ Y +F ++ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM M+ TGN RRES+AH+P
Sbjct: 300 GTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KPVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|448244119|ref|YP_007408172.1| putative peptidase [Serratia marcescens WW4]
gi|445214483|gb|AGE20153.1| putative peptidase [Serratia marcescens WW4]
Length = 481
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 260/474 (54%), Positives = 354/474 (74%), Gaps = 9/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL L + L ++LG + + ++DYAD YFQ + +E W++E+GI+K G+++I+QGVGVR
Sbjct: 10 LLATNKLSHQDLYRVLGQLAERRIDYADLYFQSSYHEAWVIEDGIIKDGSYNIDQGVGVR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSLYSFTDTI 387
A+SG+KT F Y+D I+ N L + ++ RSI Q +G+ + +I +LY D +
Sbjct: 70 AVSGEKTGFAYADQITLNALQQSAQAARSIVREQGDGRAH---TLGEIGYRALYPLLDPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S+ EKI LL RV+K+AR D RV +V A+++G Y+ +L+ DG + AD+RPLV+L
Sbjct: 127 QSLPREEKIALLHRVDKVARAADVRVQEVNASITGVYEQVLVAATDGTLAADVRPLVRLS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEAKPAPAG 502
V+++VE++G+RE G+SG GGR+ Y+YF D+ + +V AL+NL A APAG
Sbjct: 187 VSVLVEQDGKRERGSSGGGGRFGYDYFLETVDGDVRADAYAKEAVRMALVNLGAVAAPAG 246
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+GTL RR
Sbjct: 247 NMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGHMGELVASELCTVVDDGTLQGRR 306
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+ IDDEG P Q LIENG+L+GYMQD +NARLM ++ TGN RRES+AH+P+PRMTNT
Sbjct: 307 GSLAIDDEGVPGQYNVLIENGVLRGYMQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNT 366
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML G+ PEEII+SV+ GLYA NF GGQVDIT+GKFVFS ++AY+I+ G+IT PVKGAT
Sbjct: 367 YMLAGQSTPEEIIASVEYGLYAPNFGGGQVDITSGKFVFSTTEAYLIEKGRITKPVKGAT 426
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
LIG G ++++SM+GND+ LD GVGVCGK+GQ VPVGVGQPTLK+D++TVGGT
Sbjct: 427 LIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSVPVGVGQPTLKLDTLTVGGT 480
>gi|291619113|ref|YP_003521855.1| TldD [Pantoea ananatis LMG 20103]
gi|378765454|ref|YP_005193913.1| protease TldD [Pantoea ananatis LMG 5342]
gi|386017363|ref|YP_005935661.1| protein TldD [Pantoea ananatis AJ13355]
gi|386077707|ref|YP_005991232.1| protease TldD [Pantoea ananatis PA13]
gi|291154143|gb|ADD78727.1| TldD [Pantoea ananatis LMG 20103]
gi|327395443|dbj|BAK12865.1| protein TldD [Pantoea ananatis AJ13355]
gi|354986888|gb|AER31012.1| protease TldD [Pantoea ananatis PA13]
gi|365184926|emb|CCF07876.1| protease TldD [Pantoea ananatis LMG 5342]
Length = 481
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 255/481 (53%), Positives = 351/481 (72%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL +++++ L +LG + + ++DYAD YFQ + +E+W+LE+ I+K G++ I
Sbjct: 3 LNLVSEQLLTANNINQQDLFSLLGQLSERRLDYADLYFQSSFHESWVLEDKIIKDGSYHI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D I+ N L + ++ RSI Q NGK + + + SL
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQITLNALRLSSEAARSIVREQGNGKAQTLSAVVN---RSL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ +KI LL RV+++AR DPRV +V A+L+G Y+ +L+ DG + AD+
Sbjct: 120 YAPVDPLGSLSREDKIALLHRVDQVARAADPRVQEVNASLTGVYEQVLVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L +++ VE G+RE G+SG G R Y +F ++ + +V AL+NL
Sbjct: 180 RPLVRLSISVQVEDQGKRERGSSGGGARTGYAFFLADENGEVRADAWAREAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS T+VD+
Sbjct: 240 AVAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGKMGQLVASDLCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ RGS+ IDDEG P Q LIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTIDGLRGSLAIDDEGVPGQYNVLIENGVLKGYMQDKLNARLMGVNPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P++II SV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+ GK+T
Sbjct: 360 MPRMTNTYMLAGKSTPQDIIESVEYGLYAPNFGGGQVDITSGKFVFSTSEAYLIEKGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK+D +T+GG
Sbjct: 420 KPVKGATLIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLDKLTIGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|123443979|ref|YP_001007949.1| protease TldD [Yersinia enterocolitica subsp. enterocolitica 8081]
gi|420260170|ref|ZP_14762857.1| protease TldD [Yersinia enterocolitica subsp. enterocolitica
WA-314]
gi|122090940|emb|CAL13822.1| putative modulator of DNA gyrase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|404512384|gb|EKA26232.1| protease TldD [Yersinia enterocolitica subsp. enterocolitica
WA-314]
Length = 481
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 266/481 (55%), Positives = 355/481 (73%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L+ LL L+ + L +LG + + ++DYAD YFQ + +E W+LE+ I+K G+++I
Sbjct: 3 LSFVSEQLLAANKLNHQDLFSVLGQLAERRLDYADLYFQSSYHEAWVLEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D I+ N L + + RSI + NGK+ + I+ +L
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQITLNALQQSAHAARSIVRDTGNGKVHTLGEIRH---QAL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y D + S++ +KI LL RV+K+AR D RV +V A+L+G Y+ IL+ DG + AD+
Sbjct: 120 YPLLDPLQSLSREDKIALLHRVDKVARAADKRVQEVSASLTGVYEQILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLE 495
RPLV+L V+++VE+NG+RE G SG GGR+ Y+YF + + + + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEENGKRERGASGGGGRFGYDYFLETVDGEVRADNFANEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+GSS FS +GK +AS+ T+VD+
Sbjct: 240 AIAAPAGAMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGSSVFSGQMGKLVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTMQGRRGSLAIDDEGVPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK PE+II+SV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+ GKIT
Sbjct: 360 MPRMTNTYMLAGKSTPEDIIASVEYGLYAPNFGGGQVDITSGKFVFSTSEAYLIEKGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
VKGATLIG G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 RAVKGATLIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|270263281|ref|ZP_06191551.1| hypothetical protein SOD_d02980 [Serratia odorifera 4Rx13]
gi|421785776|ref|ZP_16222199.1| csrA activity inhibitor TldD [Serratia plymuthica A30]
gi|270042969|gb|EFA16063.1| hypothetical protein SOD_d02980 [Serratia odorifera 4Rx13]
gi|407751965|gb|EKF62125.1| csrA activity inhibitor TldD [Serratia plymuthica A30]
Length = 481
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 262/474 (55%), Positives = 352/474 (74%), Gaps = 9/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL L + L +LG + + ++DYAD YFQ + +E W++E+ I+K G+++I+QGVGVR
Sbjct: 10 LLAANKLSHQDLFSVLGQLAERRLDYADLYFQSSYHEAWVIEDSIIKDGSYNIDQGVGVR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
A+SG+KT F Y+D I+ N L + ++ RSI S +G++ + I +LY D +
Sbjct: 70 AVSGEKTGFAYADQITLNALNQSAQAARSIVRDSGDGRVHTLGEISH---KALYPLLDPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S+ EKI LL RV+K+AR D RV +V A+++G Y+ IL+ DG + AD+RPLV+L
Sbjct: 127 QSLPREEKIALLHRVDKVARAADKRVQEVSASITGVYEQILVAATDGTLAADVRPLVRLS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLEAKPAPAG 502
V+++VE++G+RE G+SG GGR+ Y+YF +++ + +V ALINL A APAG
Sbjct: 187 VSVLVEEDGKRERGSSGGGGRFGYDYFLEVVDGDVRADAYAKEAVRMALINLSAVAAPAG 246
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+GTL RR
Sbjct: 247 NMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGQLVASELCTVVDDGTLQGRR 306
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNT
Sbjct: 307 GSLAIDDEGVPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNT 366
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML GK PEEII+SV+ GLYA NF GGQVDIT+GKFVFS ++AY+I+ G+IT PVKGAT
Sbjct: 367 YMLAGKSTPEEIIASVEYGLYAPNFGGGQVDITSGKFVFSTTEAYLIEKGRITKPVKGAT 426
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
LIG G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK+D +TVGGT
Sbjct: 427 LIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLDMLTVGGT 480
>gi|383934775|ref|ZP_09988215.1| TldD protein [Rheinheimera nanhaiensis E407-8]
gi|383704310|dbj|GAB58306.1| TldD protein [Rheinheimera nanhaiensis E407-8]
Length = 480
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 266/480 (55%), Positives = 351/480 (73%), Gaps = 7/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+ A L+ DL + L LG +F +++D+AD YFQ + +E+W+LE+G+VK G+F+I
Sbjct: 1 MTAAEQNLITASDLTDNDLQATLGYLFDHQLDFADLYFQSSVHESWVLEDGLVKDGSFNI 60
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+GVGVRAISG+KT F Y+D IS L A + R IA Q G+ +K K +++Y
Sbjct: 61 ERGVGVRAISGEKTGFAYADTISSAALKQAATAARGIAAQ--GQHGRVKAFSKSGNSNIY 118
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + S++ EK+ LL ++E R D R +V+ +LSG Y+ IL+ +DG DIR
Sbjct: 119 LPCEPLQSLSNTEKVALLHQIEAYIRTLDNRAEQVMVSLSGVYEEILVAASDGTYATDIR 178
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLEA 496
PLV+L ++++++ RRE G++G GGR +Y+YFT+++ + +V A +NL A
Sbjct: 179 PLVRLNCSVLLQQGDRRERGSAGGGGRTSYSYFTELLDDAPRWQHYAREAVRQAQVNLTA 238
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS FS IG+++ASK TIVD+G
Sbjct: 239 IDAPAGTMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSTFSGRIGQQVASKLCTIVDDG 298
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TLA+RRGS+N+DDEG P+Q LIENGILKGY+QD NA LM ++ TGN RRESFAH+P+
Sbjct: 299 TLAHRRGSLNVDDEGVPSQHNVLIENGILKGYIQDKHNAMLMGVAPTGNGRRESFAHLPM 358
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G P EII+SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 359 PRMTNTYMLAGDSDPAEIIASVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIENGKITA 418
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG GP +++VSM+GND+ LD GVGVCGK GQ VPVGVGQPTLK+D++TVGGT
Sbjct: 419 PIKGATLIGMGPEAMQQVSMVGNDLALDAGVGVCGKQGQSVPVGVGQPTLKLDAMTVGGT 478
>gi|423199291|ref|ZP_17185874.1| hypothetical protein HMPREF1171_03906 [Aeromonas hydrophila SSU]
gi|404629286|gb|EKB26047.1| hypothetical protein HMPREF1171_03906 [Aeromonas hydrophila SSU]
Length = 482
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 270/481 (56%), Positives = 362/481 (75%), Gaps = 7/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L+ + LL P DLDE L ++LG++ ++V++ D YFQ + +E+W+LE+GIVK G+++I
Sbjct: 4 LSQVSASLLAPNDLDEGRLQQLLGSLMSHQVEFGDLYFQRSWHESWMLEDGIVKDGSYNI 63
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QGVGVRA+SG+KT F YSD++S L +V T + + G +K + + N LY
Sbjct: 64 DQGVGVRAVSGEKTGFAYSDELSLLALQQSV--TAARGIAAAGAQGKVKAWARTEANLLY 121
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
D + +++ ++KI LLE+++K AR DP + +V+A++SG Y+ +L+ DG + AD+R
Sbjct: 122 PALDPLQTLDKQQKIALLEQMDKFARSLDPAINQVMASISGVYEEVLVAATDGTLAADVR 181
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-LEK----CVSNSVNSALINLEA 496
PLV+L VT+I EK RRE G++G GGR+ Y+YF ++ LE V +V AL+NL+A
Sbjct: 182 PLVRLSVTVIAEKGERRERGSAGGGGRFGYDYFLELDGLESRAFGYVREAVRQALVNLDA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSSAF+ IG+++ASK TIVD+G
Sbjct: 242 IDAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRKGSSAFAGRIGEQVASKHCTIVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL RRGS++IDDEG P LIENGILKGY+QD NARLM + +TGN RRES+A +P+
Sbjct: 302 TLPGRRGSVSIDDEGTPGGYNVLIENGILKGYLQDKQNARLMGVPLTGNGRRESYAALPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G++ P EII+SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I++GKIT
Sbjct: 362 PRMTNTYMLAGQYDPAEIIASVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIEDGKITA 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG+GP + +VSM+G D+ LD GVGVCGK+GQ VPVGVGQPTLK+D +TVGGT
Sbjct: 422 PIKGATLIGNGPEAMSQVSMVGKDLALDRGVGVCGKEGQSVPVGVGQPTLKLDQLTVGGT 481
Query: 737 N 737
Sbjct: 482 Q 482
>gi|423126026|ref|ZP_17113705.1| protein tldD [Klebsiella oxytoca 10-5250]
gi|376398127|gb|EHT10755.1| protein tldD [Klebsiella oxytoca 10-5250]
Length = 481
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 263/481 (54%), Positives = 359/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L+ + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLLANGLNHQDLFTILGQLAERRLDYGDLYFQSSYHESWVLEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D IS+ L + ++ R+I + +GK+ + ++ +SL
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQISRLALEQSAQAARTIVRDHGDGKVHTLGGVEH---SSL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K AR D RV +V A+L+G Y++IL+ DG + AD+
Sbjct: 120 YTSIDPLQSMSREEKLDILRRVDKTARAADKRVQEVSASLTGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE++G+RE G SG GGR+ Y+YF D+ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEEDGKRERGASGGGGRFGYDYFLASQDGDVRADVWAREAVRMALVNLT 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG++ VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGMLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGHMGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ANRRGS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTIANRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV G+YA NF GGQVDIT+GKFVFS S+AY+I+ GK+T
Sbjct: 360 MPRMTNTYMLAGKSTPQEIIESVDYGIYAPNFGGGQVDITSGKFVFSTSEAYLIEKGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
VKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ VPVGVGQPTLK+D +TVGG
Sbjct: 420 KAVKGATLIGSGIEAMQQISMVGNDLKLDSGVGVCGKEGQSVPVGVGQPTLKVDKLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|291086491|ref|ZP_06571540.1| TldD protein [Citrobacter youngae ATCC 29220]
gi|291067564|gb|EFE05673.1| TldD protein [Citrobacter youngae ATCC 29220]
Length = 486
Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust.
Identities = 264/481 (54%), Positives = 358/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 8 LNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 67
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRAISG+KT F Y+D IS L + + R+I S +GK+K + ++ +L
Sbjct: 68 DQGVGVRAISGEKTGFAYADQISLLALEQSAHAARTIVRDSGDGKVKTLGAVEH---QAL 124
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+ +AR D RV +V A+L+G Y++IL+ DG + AD+
Sbjct: 125 YTSVDPLQSMSREEKLDILRRVDSVARAADKRVQEVTASLTGVYELILVAATDGTLAADV 184
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V++ VE++G+RE G SG GGR+ Y+YF D+ + +V AL+NL
Sbjct: 185 RPLVRLSVSVQVEEDGKRERGASGGGGRFGYDYFLGDLDGDVRADAWAKEAVRMALVNLS 244
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 245 AVAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGHMGELVASELCTVVDD 304
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+A+RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 305 GTMADRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 364
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 365 MPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 424
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 425 KPVKGATLIGSGIEAMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 484
Query: 736 T 736
T
Sbjct: 485 T 485
>gi|238793750|ref|ZP_04637372.1| Protein tldD [Yersinia intermedia ATCC 29909]
gi|238726991|gb|EEQ18523.1| Protein tldD [Yersinia intermedia ATCC 29909]
Length = 481
Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust.
Identities = 265/481 (55%), Positives = 354/481 (73%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L+ LL L+ + L +LG + + ++DYAD YFQ + +E W+LE+ I+K G+++I
Sbjct: 3 LSFVSEQLLAANKLNHQDLFSVLGQLAERRLDYADLYFQSSYHEAWVLEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D I+ N L + + RSI + NGK+ + ++ +L
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQITLNALQQSAHAARSIVRDNGNGKVH---TLGEVAYQAL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y D + S++ +KI LL RV+K+AR D RV +V A+L+G Y+ +L+ DG + AD+
Sbjct: 120 YPLLDPLQSLSREDKIALLHRVDKVARAADKRVQEVSASLTGVYEQVLVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLE 495
RPLV+L V+++VE NG+RE G SG GGR+ Y+YF + + + + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEDNGKRERGASGGGGRFGYDYFLETVDGEVRADNFANEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+GSS FS +GK +AS+ T+VD+
Sbjct: 240 AVAAPAGAMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGSSVFSGQMGKLVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTMQGRRGSLAIDDEGVPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK PEEII+SV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+ GKIT
Sbjct: 360 MPRMTNTYMLAGKSTPEEIIASVEYGLYAPNFGGGQVDITSGKFVFSTSEAYLIEKGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
VKGATLIG G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 RAVKGATLIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|157372637|ref|YP_001480626.1| protease TldD [Serratia proteamaculans 568]
gi|157324401|gb|ABV43498.1| peptidase U62 modulator of DNA gyrase [Serratia proteamaculans 568]
Length = 481
Score = 533 bits (1374), Expect = e-148, Method: Compositional matrix adjust.
Identities = 262/474 (55%), Positives = 351/474 (74%), Gaps = 9/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL L + L +LG + + ++DYAD YFQ + +E W++E+GI+K G+++I+QGVGVR
Sbjct: 10 LLAANKLSHQDLFSVLGQLAERRLDYADLYFQSSYHEAWVIEDGIIKDGSYNIDQGVGVR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
A+SG+KT F Y+D I+ N L + + RSI S NG++ + I +LY D +
Sbjct: 70 AVSGEKTGFAYADQITLNALQQSAHAARSIVRDSGNGQVHTLGEISH---KALYPLLDPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S+ EKI LL R++K+AR D RV +V A+++G Y+ IL+ DG + AD+RPLV+L
Sbjct: 127 QSLPREEKIALLHRIDKVARAADKRVQEVSASITGVYEQILVAATDGTLAADVRPLVRLS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLEAKPAPAG 502
V+++VE++G+RE G+SG GGR+ Y+YF ++ + +V ALINL A APAG
Sbjct: 187 VSVLVEQDGKRERGSSGGGGRFGYDYFLEIADGEVRADAYAKEAVRMALINLSAVAAPAG 246
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+GTL R
Sbjct: 247 NMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGQLVASELCTVVDDGTLQGLR 306
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNT
Sbjct: 307 GSLAIDDEGVPGQYNMLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNT 366
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML GK PEEII+SV+ GLYA NF GGQVDIT+GKFVFS ++AY+I+ G+IT PVKGAT
Sbjct: 367 YMLAGKSTPEEIIASVEYGLYAPNFGGGQVDITSGKFVFSTTEAYLIEKGRITKPVKGAT 426
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
LIG G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK+D++TVGGT
Sbjct: 427 LIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLDTLTVGGT 480
>gi|411011078|ref|ZP_11387407.1| protein TldD [Aeromonas aquariorum AAK1]
Length = 482
Score = 533 bits (1374), Expect = e-148, Method: Compositional matrix adjust.
Identities = 270/481 (56%), Positives = 362/481 (75%), Gaps = 7/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L+ + LL P DLDE L ++LG++ ++V++ D YFQ + +E+W+LE+GIVK G+++I
Sbjct: 4 LSQVSASLLAPNDLDEGRLQQLLGSLMSHQVEFGDLYFQRSWHESWMLEDGIVKDGSYNI 63
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QGVGVRA+SG+KT F YSD++S L +V T + + G +K + + N LY
Sbjct: 64 DQGVGVRAVSGEKTGFAYSDELSLLALQQSV--TAARGIAAAGAQGQVKAWARTEANLLY 121
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
D + +++ ++KI LLE+++K AR DP + +V+A++SG Y+ +L+ DG + AD+R
Sbjct: 122 PALDPLQTLDKQQKIALLEQMDKFARGLDPAINQVMASISGVYEEVLVAATDGTLAADVR 181
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-LEK----CVSNSVNSALINLEA 496
PLV+L VT+I EK RRE G++G GGR+ Y+YF ++ LE V +V AL+NL+A
Sbjct: 182 PLVRLSVTVIAEKGERRERGSAGGGGRFGYDYFLELDGLESRAFGYVREAVRQALVNLDA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSSAF+ IG+++ASK TIVD+G
Sbjct: 242 IDAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRKGSSAFAGRIGEQVASKHCTIVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL RRGS++IDDEG P LIENGILKGY+QD NARLM + +TGN RRES+A +P+
Sbjct: 302 TLPGRRGSVSIDDEGTPGGYNVLIENGILKGYLQDKQNARLMGVPLTGNGRRESYAALPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G++ P EII+SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I++GKIT
Sbjct: 362 PRMTNTYMLAGQYDPAEIIASVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIEDGKITA 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG+GP + +VSM+G D+ LD GVGVCGK+GQ VPVGVGQPTLK+D +TVGGT
Sbjct: 422 PIKGATLIGNGPEAMSQVSMVGKDLALDRGVGVCGKEGQSVPVGVGQPTLKLDQLTVGGT 481
Query: 737 N 737
Sbjct: 482 Q 482
>gi|432751714|ref|ZP_19986297.1| protein tldD [Escherichia coli KTE29]
gi|431294890|gb|ELF85069.1| protein tldD [Escherichia coli KTE29]
Length = 481
Score = 533 bits (1374), Expect = e-148, Method: Compositional matrix adjust.
Identities = 264/481 (54%), Positives = 359/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRAISG+KT F Y+D IS L + ++ R+I S +GK++ + ++ + L
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRDSGDGKVQTLGAVEH---SPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE++G+RE G SG GGR+ Y +F ++ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM M+ TGN RRES+AH+P
Sbjct: 300 GTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSISEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KPVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|50956513|gb|AAT90762.1| putative DNA gyrase modulator [Yersinia enterocolitica]
Length = 481
Score = 533 bits (1374), Expect = e-148, Method: Compositional matrix adjust.
Identities = 266/481 (55%), Positives = 354/481 (73%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L+ LL L+ + L +LG + + ++DYAD YFQ + +E W+LE+ I+K G+++I
Sbjct: 3 LSFVSEQLLAANKLNHQDLFSVLGQLAERRLDYADLYFQSSYHEAWVLEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D I+ N L + + RSI NGK+ + I+ +L
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQITLNALQQSAHAARSIVRDIGNGKVHTLGEIRH---QAL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y D + S++ +KI LL RV+K+AR D RV +V A+L+G Y+ IL+ DG + AD+
Sbjct: 120 YPLLDPLQSLSREDKIALLHRVDKVARAADKRVQEVSASLTGVYEQILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLE 495
RPLV+L V+++VE+NG+RE G SG GGR+ Y+YF + + + + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEENGKRERGASGGGGRFGYDYFLETVDGEVRADNFANEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+GSS FS +GK +AS+ T+VD+
Sbjct: 240 AIAAPAGAMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGSSVFSGQMGKLVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTMQGRRGSLAIDDEGVPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK PE+II+SV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+ GKIT
Sbjct: 360 MPRMTNTYMLAGKSTPEDIIASVEYGLYAPNFGGGQVDITSGKFVFSTSEAYLIEKGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
VKGATLIG G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 SAVKGATLIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|218550528|ref|YP_002384319.1| protease TldD [Escherichia fergusonii ATCC 35469]
gi|422803892|ref|ZP_16852324.1| tldD protein [Escherichia fergusonii B253]
gi|424817803|ref|ZP_18242954.1| protease TldD [Escherichia fergusonii ECD227]
gi|218358069|emb|CAQ90715.1| putative peptidase [Escherichia fergusonii ATCC 35469]
gi|324115152|gb|EGC09116.1| tldD protein [Escherichia fergusonii B253]
gi|325498823|gb|EGC96682.1| protease TldD [Escherichia fergusonii ECD227]
Length = 481
Score = 533 bits (1374), Expect = e-148, Method: Compositional matrix adjust.
Identities = 264/481 (54%), Positives = 358/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLTANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRAISG+KT F Y+D IS L + ++ R+I S +GK++ + ++ + L
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRDSGDGKVQTLGAVEH---SPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTAVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE++G+RE G SG GGR+ Y +F ++ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS T+VD+
Sbjct: 240 AVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASTLCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM M+ TGN RRES+AH+P
Sbjct: 300 GTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KPVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|422969599|ref|ZP_16973392.1| protein tldD [Escherichia coli TA124]
gi|371601072|gb|EHN89840.1| protein tldD [Escherichia coli TA124]
Length = 481
Score = 533 bits (1374), Expect = e-148, Method: Compositional matrix adjust.
Identities = 264/480 (55%), Positives = 359/480 (74%), Gaps = 7/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QGVGVRAISG+KT F Y+D IS L + ++ R+I + NG K+ + + ++ + LY
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIV-RDNGDGKV-QTLGAVEHSPLY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+R
Sbjct: 121 TSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADVR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L V+++VE++G+RE G SG GGR+ Y +F ++ + +V AL+NL A
Sbjct: 181 PLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLSA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+G
Sbjct: 241 VAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ +RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM M+ TGN RRES+AH+P+
Sbjct: 301 TMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML GK P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 361 PRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTK 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGGT
Sbjct: 421 PVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGGT 480
>gi|291044877|ref|ZP_06570586.1| TldD protein [Neisseria gonorrhoeae DGI2]
gi|291011771|gb|EFE03767.1| TldD protein [Neisseria gonorrhoeae DGI2]
Length = 494
Score = 533 bits (1373), Expect = e-148, Method: Compositional matrix adjust.
Identities = 264/486 (54%), Positives = 355/486 (73%), Gaps = 4/486 (0%)
Query: 253 LISQKNIHPLNIA-RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEE 311
+ +HP A ++ LLE L ++L K L + + VDYAD Y Q T E+W LEE
Sbjct: 9 FLCADTMHPTYSAVQARLLEANRLSPELLAKSLCIIGAHHVDYADIYCQRTAYESWHLEE 68
Query: 312 GIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKN 371
GIVK+G+F I+QGVGVRA+SGDKTAF Y+D + +++ + ++ R+I + GK+ K
Sbjct: 69 GIVKSGSFQIDQGVGVRAVSGDKTAFAYADSLCIDSINRSARAVRAI-GAAGGKVSA-KM 126
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ + + S +D I+ + K+ LL +VE IA+ DPR+++V+A L+ EYD++ + R
Sbjct: 127 PSETRGKPVCSASDPIAGFDSAAKVALLNKVEAIAKAADPRIVQVMAGLTCEYDMVYLAR 186
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
DG ADIRP+V+L VT+I ++ RRE G +G GGRY+ YF + ++ + V +V AL
Sbjct: 187 LDGKHAADIRPMVRLNVTVIAKQGERREQGGAGGGGRYDLAYFDETLVRQFVDAAVKQAL 246
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
NLE++PAPAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+R+A+K +T
Sbjct: 247 TNLESRPAPAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKGTSVFSGRIGERVAAKGVT 306
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD G +A RRGS+NIDDEGN T+ T LIE+GIL GYMQD NARL TGN RR+S+
Sbjct: 307 VVDQGDIAGRRGSLNIDDEGNETRRTVLIEDGILVGYMQDETNARLTGTQSTGNGRRQSY 366
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A +P+PRMTNT+M NG + PEEII+S+ G+YA NF GGQVDIT+GKFVF AS+A+ ++
Sbjct: 367 ASVPMPRMTNTFMENGSYEPEEIIASIDKGIYAVNFGGGQVDITSGKFVFGASEAWWVEG 426
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS- 730
G++ YPVKGAT+IG+GP +LK VSMIGND LD GVGVCGK+GQ VPVGVGQPTL+ID+
Sbjct: 427 GRLQYPVKGATIIGNGPEVLKHVSMIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAG 486
Query: 731 ITVGGT 736
+TVGG+
Sbjct: 487 LTVGGS 492
>gi|268685218|ref|ZP_06152080.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
gi|268625502|gb|EEZ57902.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
Length = 494
Score = 533 bits (1373), Expect = e-148, Method: Compositional matrix adjust.
Identities = 264/486 (54%), Positives = 355/486 (73%), Gaps = 4/486 (0%)
Query: 253 LISQKNIHPLNIA-RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEE 311
+ +HP A ++ LLE L ++L K L + VDYAD Y Q T E+W LEE
Sbjct: 9 FLCADTMHPTYSAVQARLLEANRLSPELLAKSLCIIGAYHVDYADIYCQRTAYESWHLEE 68
Query: 312 GIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKN 371
GIVK+G+F I+QGVGVRA+SGDKTAF Y+D + +++ + ++ R+I + GK+ K
Sbjct: 69 GIVKSGSFQIDQGVGVRAVSGDKTAFAYADSLCIDSINRSARAVRAI-GAAGGKVSA-KM 126
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ + + S +D I+ ++ K+ LL +VE IA+ DPR+++V+A L+ EYD++ + R
Sbjct: 127 PSETRGKPVCSASDPIAGLDSAAKVALLNKVEAIAKAADPRIVQVMAGLTCEYDMVYLAR 186
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
DG ADIRP+V+L VT+I ++ RRE G +G GGRY+ YF + ++ + V +V AL
Sbjct: 187 LDGKHAADIRPMVRLNVTVIAKQGERREQGGAGGGGRYDLAYFDETLVRQFVDAAVKQAL 246
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
NLE++PAPAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+R+A+K +T
Sbjct: 247 TNLESRPAPAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKGTSVFSGRIGERVAAKGVT 306
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD G +A RRGS+NIDDEGN T+ T LIE+GIL GYMQD NARL TGN RR+S+
Sbjct: 307 VVDQGDIAGRRGSLNIDDEGNETRRTVLIEDGILVGYMQDETNARLTGTQSTGNGRRQSY 366
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A +P+PRMTNT+M NG + PEEII+S+ G+YA NF GGQVDIT+GKFVF AS+A+ ++
Sbjct: 367 ASVPMPRMTNTFMENGSYEPEEIIASIDKGIYAVNFGGGQVDITSGKFVFGASEAWWVEG 426
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS- 730
G++ YPVKGAT+IG+GP +LK VSMIGND LD GVGVCGK+GQ VPVGVGQPTL+ID+
Sbjct: 427 GRLQYPVKGATIIGNGPEVLKHVSMIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAG 486
Query: 731 ITVGGT 736
+TVGG+
Sbjct: 487 LTVGGS 492
>gi|429083765|ref|ZP_19146794.1| TldD protein, part of proposed TldE/TldD proteolytic complex (PMID
12029038) [Cronobacter condimenti 1330]
gi|426547384|emb|CCJ72835.1| TldD protein, part of proposed TldE/TldD proteolytic complex (PMID
12029038) [Cronobacter condimenti 1330]
Length = 481
Score = 533 bits (1373), Expect = e-148, Method: Compositional matrix adjust.
Identities = 262/481 (54%), Positives = 356/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG +++ ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLSANGLSHQDLFSILGQLYERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D IS L + ++ RSI Q +G++K + ++ + L
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQISLLALTQSAQAARSIVREQGDGRVK---TLNAVEYSPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+ AR D RV +V A+L+G Y++IL+ DG + AD+
Sbjct: 120 YTTLDPLQSLSREEKLDILRRVDNAARAADKRVQEVSASLTGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V++ VE +G+RE G+SG GGR+ Y +F ++ E +V AL+NL
Sbjct: 180 RPLVRLSVSVQVEDDGKRERGSSGGGGRFGYQWFLEETEGEVRAEAWAREAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGQLVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTLANRRGS+ IDDEG P Q LIENGILKGYMQD +NARLM + TGN RRES+AH+P
Sbjct: 300 GTLANRRGSLAIDDEGVPGQYNVLIENGILKGYMQDKLNARLMGVPPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV+ G++A NF GGQVDIT+GKFVFS S+AY+I+ GK+T
Sbjct: 360 MPRMTNTYMLAGKSTPQEIIESVEYGIFAPNFGGGQVDITSGKFVFSTSEAYLIEKGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KPVKGATLIGSGIEAMQQISMVGNDVKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|432373819|ref|ZP_19616851.1| protein tldD [Escherichia coli KTE11]
gi|430894004|gb|ELC16306.1| protein tldD [Escherichia coli KTE11]
Length = 481
Score = 533 bits (1373), Expect = e-148, Method: Compositional matrix adjust.
Identities = 264/481 (54%), Positives = 359/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRAISG+KT F Y+D IS L + ++ R+I S +GK++ + ++ + L
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRDSGDGKVQTLGAVEH---SPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTSLDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE++G+RE G SG GGR+ Y +F ++ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQLGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM M+ TGN RRES+AH+P
Sbjct: 300 GTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KPVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|194099718|ref|YP_002002853.1| protein TldD [Neisseria gonorrhoeae NCCP11945]
gi|268595716|ref|ZP_06129883.1| TLDD protein [Neisseria gonorrhoeae 35/02]
gi|385336659|ref|YP_005890606.1| protein TldD [Neisseria gonorrhoeae TCDC-NG08107]
gi|193935008|gb|ACF30832.1| TldD [Neisseria gonorrhoeae NCCP11945]
gi|268549105|gb|EEZ44523.1| TLDD protein [Neisseria gonorrhoeae 35/02]
gi|317165202|gb|ADV08743.1| TldD [Neisseria gonorrhoeae TCDC-NG08107]
Length = 494
Score = 533 bits (1373), Expect = e-148, Method: Compositional matrix adjust.
Identities = 264/486 (54%), Positives = 356/486 (73%), Gaps = 4/486 (0%)
Query: 253 LISQKNIHPLNIA-RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEE 311
+ +HP A ++ LLE L ++L K L + + VDYAD Y Q T E+W LEE
Sbjct: 9 FLCADTMHPTYSAVQARLLEANRLCPELLAKSLCIIGAHHVDYADIYCQRTAYESWHLEE 68
Query: 312 GIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKN 371
GIVK+G+F I+QGVGVRA+SGDKTAF Y+D + +++ + ++ R+I + GK+ K
Sbjct: 69 GIVKSGSFQIDQGVGVRAVSGDKTAFAYADSLCIDSINRSARAVRAI-GAAGGKVSA-KM 126
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ + + S +D I+ ++ K+ LL +VE IA+ DPR+++V+A L+ EYD++ + R
Sbjct: 127 PSETRGKPVCSASDPIAGLDSAAKVALLNKVEAIAKAADPRIVQVMAGLTCEYDMVYLAR 186
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
DG ADIRP+V+L VT+I ++ RRE G +G GGRY+ YF + ++ + V +V AL
Sbjct: 187 LDGKHAADIRPMVRLNVTVIAKQGERREQGGAGGGGRYDLAYFDETLVRQFVDAAVKQAL 246
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
NLE++PAPAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+R+A+K +T
Sbjct: 247 TNLESRPAPAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKGTSVFSGRIGERVAAKGVT 306
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD G +A RRGS+NIDDEGN T+ T LIE+GIL GYMQD NARL TGN RR+S+
Sbjct: 307 VVDQGDIAGRRGSLNIDDEGNETRRTVLIEDGILVGYMQDETNARLTGTQSTGNGRRQSY 366
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A +P+PRMTNT+M NG + PEEII+S+ G+YA NF GGQVDIT+GKFVF AS+A+ ++
Sbjct: 367 ASVPMPRMTNTFMENGSYEPEEIIASIDKGIYAVNFGGGQVDITSGKFVFGASEAWWVEG 426
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS- 730
G++ YPVKGAT+IG+GP +LK VSMIGND LD GVGVCGK+GQ VPVGVGQPTL+ID+
Sbjct: 427 GRLQYPVKGATIIGNGPEVLKHVSMIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAG 486
Query: 731 ITVGGT 736
+TVGG+
Sbjct: 487 LTVGGS 492
>gi|423208001|ref|ZP_17194555.1| hypothetical protein HMPREF1169_00073 [Aeromonas veronii AER397]
gi|404619637|gb|EKB16546.1| hypothetical protein HMPREF1169_00073 [Aeromonas veronii AER397]
Length = 482
Score = 533 bits (1373), Expect = e-148, Method: Compositional matrix adjust.
Identities = 269/481 (55%), Positives = 362/481 (75%), Gaps = 7/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L+ + LL P DLDE L ++LG++ ++V++ D YFQ + +E+W+LE+GIVK G+++I
Sbjct: 4 LSQVSASLLAPNDLDEGRLQQLLGSLMSHQVEFGDLYFQRSWHESWMLEDGIVKDGSYNI 63
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QGVGVRA+SG+KT F YSD++S L +V T + + G +K + + N LY
Sbjct: 64 DQGVGVRAVSGEKTGFAYSDELSLLALQQSV--TAARGIAAAGAHGKVKAWARTEANLLY 121
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
D + +++ +KI LLE+++K AR DP + +V+A++SG Y+ +L+ DG + AD+R
Sbjct: 122 PAMDPLQTLDKHQKIALLEQMDKFARSLDPAINQVMASISGVYEEVLVAATDGTLAADVR 181
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-LEK----CVSNSVNSALINLEA 496
PLV+L VT+I EK RRE G++G GGR+ Y++F ++ LE V +V AL+NLEA
Sbjct: 182 PLVRLSVTVIAEKGDRRERGSAGGGGRFGYDWFLELDGLESRAFGYVREAVRQALVNLEA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSSAF+ IG+++ASK TIVD+G
Sbjct: 242 IDAPAGTMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSAFAGRIGEQVASKHCTIVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL RRGS++IDDEG P LIENGILKGY+QD NARLM + +TGN RRES+A +P+
Sbjct: 302 TLPGRRGSVSIDDEGTPGGYNVLIENGILKGYLQDKQNARLMGVPLTGNGRRESYAAMPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G++ P EII+SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I++GKIT
Sbjct: 362 PRMTNTYMLAGQYDPAEIIASVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIEDGKITA 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG+GP + +VSM+G+D+ LD GVG+CGK+GQ VPVGVGQPTLK+D +TVGGT
Sbjct: 422 PIKGATLIGNGPEAMSQVSMVGSDLALDRGVGICGKEGQSVPVGVGQPTLKLDQLTVGGT 481
Query: 737 N 737
Sbjct: 482 Q 482
>gi|419913572|ref|ZP_14432003.1| protease TldD [Escherichia coli KD1]
gi|388389230|gb|EIL50766.1| protease TldD [Escherichia coli KD1]
Length = 481
Score = 533 bits (1373), Expect = e-148, Method: Compositional matrix adjust.
Identities = 264/481 (54%), Positives = 359/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRAISG+KT F Y+D IS L + ++ R+I S +GK++ + ++ + L
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRDSGDGKVQTLGVVEH---SPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE++G+RE G SG GGR+ Y +F ++ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM M+ TGN RRES+AH+P
Sbjct: 300 GTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KPVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|218560306|ref|YP_002393219.1| protease TldD [Escherichia coli S88]
gi|432364487|ref|ZP_19607644.1| protein tldD [Escherichia coli KTE5]
gi|218367075|emb|CAR04846.1| putative peptidase [Escherichia coli S88]
gi|430884249|gb|ELC07220.1| protein tldD [Escherichia coli KTE5]
Length = 481
Score = 533 bits (1373), Expect = e-148, Method: Compositional matrix adjust.
Identities = 263/481 (54%), Positives = 359/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRAISG+KT F Y+D IS L + ++ R+I S +GK++ + ++ + L
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRDSGDGKVQTLGAVEH---SPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE++G+RE G SG GGR+ Y +F ++ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM M+ TGN RRES+AH+P
Sbjct: 300 GTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV+ G+YA NF GGQVDIT+G+FVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGQFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KPVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|393763765|ref|ZP_10352378.1| tldD protein [Alishewanella agri BL06]
gi|392605079|gb|EIW87977.1| tldD protein [Alishewanella agri BL06]
Length = 479
Score = 533 bits (1373), Expect = e-148, Method: Compositional matrix adjust.
Identities = 261/481 (54%), Positives = 353/481 (73%), Gaps = 7/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N+ L+ +L + L + LG +F +++DYAD YFQ + +E+W+LE+G+VK G+F+I
Sbjct: 1 MNVVEQNLINASELSARDLEQTLGFLFAHQLDYADLYFQSSVHESWVLEDGLVKDGSFNI 60
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+GVGVRAISG+KT F Y+D I+++ L+ A + R IA Q + +K K +++Y
Sbjct: 61 ERGVGVRAISGEKTGFAYADSINRDALMQAAGAARGIAAQG--QQGSVKAFSKSGNSNIY 118
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + S+ EK+ LL ++E R D R +V+ +L+G Y+ +L+ +DG DIR
Sbjct: 119 LPCEPLQSLTNTEKVALLHQIEAYIRSLDSRAEQVMVSLTGVYEEVLVAASDGTFATDIR 178
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLEA 496
PLV+L ++++ ++GRRE G++G G R +Y YF++ ++ +V A +NL A
Sbjct: 179 PLVRLNCSVLLVQDGRRERGSAGGGARTDYYYFSEETDGQPRWQQYAREAVRMAQVNLTA 238
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS FS IG+++ASK TIVD+G
Sbjct: 239 IDAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRKGSSTFSGRIGQQVASKHCTIVDDG 298
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL RRGS+NIDDEG P+ LIENGILKGY+QD NA LM ++ TGN RRESFAH+P+
Sbjct: 299 TLTGRRGSLNIDDEGTPSAYNVLIENGILKGYIQDKHNAMLMGVAPTGNGRRESFAHLPM 358
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G + PEEII+SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I++GKIT
Sbjct: 359 PRMTNTYMLGGDYAPEEIIASVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIEDGKITT 418
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG+GP +++VSM+GNDM+LD GVGVCGK GQ VPVGVGQPTLK+D++TVGGT
Sbjct: 419 PIKGATLIGNGPEAMQQVSMVGNDMRLDSGVGVCGKQGQSVPVGVGQPTLKLDAMTVGGT 478
Query: 737 N 737
Sbjct: 479 Q 479
>gi|423205050|ref|ZP_17191606.1| hypothetical protein HMPREF1168_01241 [Aeromonas veronii AMC34]
gi|404624871|gb|EKB21689.1| hypothetical protein HMPREF1168_01241 [Aeromonas veronii AMC34]
Length = 482
Score = 533 bits (1373), Expect = e-148, Method: Compositional matrix adjust.
Identities = 270/481 (56%), Positives = 362/481 (75%), Gaps = 7/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L+ + LL P DLDE L ++LG++ ++V++ D YFQ + +E+W+LE+GIVK G+++I
Sbjct: 4 LSQVSASLLAPNDLDEGRLQQLLGSLMSHQVEFGDLYFQRSWHESWMLEDGIVKDGSYNI 63
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QGVGVRA+SG+KT F YSD++S L +V T + + G +K + + N LY
Sbjct: 64 DQGVGVRAVSGEKTGFAYSDELSLLALQQSV--TAARGIAAAGAHGKVKAWARTESNLLY 121
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
D + +++ +KI LLE+++K AR DP + +V+A++SG Y+ +L+ DG + ADIR
Sbjct: 122 PAMDPLQTLDKHQKIALLEQMDKFARSLDPAINQVMASISGVYEEVLVAATDGTLAADIR 181
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-LEK----CVSNSVNSALINLEA 496
PLV+L VT+I EK RRE G++G GGR+ Y++F ++ LE V +V AL+NLEA
Sbjct: 182 PLVRLSVTVIAEKGDRRERGSAGGGGRFGYDWFLELDGLESRAFGYVREAVRQALVNLEA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSSAF+ IG+++ASK TIVD+G
Sbjct: 242 IDAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRKGSSAFAGRIGEQVASKHCTIVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL RRGS++IDDEG P LIENGILKGY+QD NARLM + +TGN RRES+A +P+
Sbjct: 302 TLPGRRGSVSIDDEGTPGGYNVLIENGILKGYLQDKQNARLMGVPLTGNGRRESYAAMPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G++ P EII+SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I++GKIT
Sbjct: 362 PRMTNTYMLAGQYDPAEIIASVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIEDGKITA 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG+GP + +VSM+G+D+ LD GVG+CGK+GQ VPVGVGQPTLK+D +TVGGT
Sbjct: 422 PIKGATLIGNGPEAMSQVSMVGSDLALDRGVGICGKEGQSVPVGVGQPTLKLDQLTVGGT 481
Query: 737 N 737
Sbjct: 482 Q 482
>gi|422007580|ref|ZP_16354566.1| protease TldD [Providencia rettgeri Dmel1]
gi|414097470|gb|EKT59125.1| protease TldD [Providencia rettgeri Dmel1]
Length = 481
Score = 533 bits (1373), Expect = e-148, Method: Compositional matrix adjust.
Identities = 270/474 (56%), Positives = 359/474 (75%), Gaps = 9/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL L ++ L ILG + + +DYAD +FQ + +E+W+LE+ I+K G+++I+QGVGVR
Sbjct: 10 LLAANRLGQENLYDILGLLSERHLDYADLFFQSSFHESWVLEDRIIKDGSYNIDQGVGVR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIAN-QSNGKIKIIKNIKKIKINSLYSFTDTI 387
A+SG+KT F Y+D IS + L + + RSI N Q +GK +I+ N++ K LYS D +
Sbjct: 70 AVSGEKTGFAYADQISLHALTQSATAARSIVNEQGSGKSQILTNVEYKK---LYSVADPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S++ +KI LL RV+++AR +DPRVI+V A+L+G Y+ +L+ DG + ADIRPLV+L
Sbjct: 127 QSLSREQKIDLLHRVDQVARAEDPRVIEVNASLTGVYEQVLVAATDGTLAADIRPLVRLS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYFTDM-----ILEKCVSNSVNSALINLEAKPAPAG 502
V+++VE +G+RE G SG GGRY Y YF ++ + E+ +V AL+NL A APAG
Sbjct: 187 VSVLVEHDGKRERGASGGGGRYGYEYFLEIHQGQVVAEQYAREAVRMALVNLSAVAAPAG 246
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
+M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG+++AS T+VD+GT+A RR
Sbjct: 247 MMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQIGEQVASPLCTVVDDGTIAGRR 306
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+ IDDEG P Q LIENGIL+ Y+QD +NARLM ++ TGNARRES+AH+P+PRMTNT
Sbjct: 307 GSLAIDDEGVPGQYNVLIENGILRNYIQDKLNARLMGVTPTGNARRESYAHLPMPRMTNT 366
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML G PEEII+SV G+YA NF GGQVDIT+GKFVFS S+AY+I+ GKIT PVKGAT
Sbjct: 367 YMLAGTSTPEEIIASVDKGIYAPNFGGGQVDITSGKFVFSTSEAYLIEKGKITSPVKGAT 426
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
LIG G ++++SM+GND+ LD GVGVCGK+GQ VPVGVGQPTLK+D +TVGGT
Sbjct: 427 LIGSGVEAMQQISMVGNDLALDKGVGVCGKEGQSVPVGVGQPTLKLDKLTVGGT 480
>gi|283788114|ref|YP_003367979.1| TldD protein [Citrobacter rodentium ICC168]
gi|282951568|emb|CBG91267.1| TldD protein [Citrobacter rodentium ICC168]
Length = 481
Score = 533 bits (1373), Expect = e-148, Method: Compositional matrix adjust.
Identities = 263/481 (54%), Positives = 358/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLKHQDLFTILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRAISG+KT F Y+D IS L + ++ R+I S +GK+K + ++ ++L
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLQALTQSAQAARTIVRDSGDGKVKTLGAVEH---SAL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K AR D RV +V A+L+G Y++IL+ DG + AD+
Sbjct: 120 YTAVDPLQSMSREEKLDILRRVDKAARDADKRVQEVTASLTGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE++G+RE G SG GGR+ Y +F ++ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEEDGKRERGASGGGGRFGYEWFLADLNGEVRADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG+ +AS+ T+VD+
Sbjct: 240 AVAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQIGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+IKNGK+T
Sbjct: 360 MPRMTNTYMLAGNSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIKNGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KPVKGATLIGSGIEAMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|420337426|ref|ZP_14838988.1| modulator of DNA gyrase family protein [Shigella flexneri K-315]
gi|391259300|gb|EIQ18374.1| modulator of DNA gyrase family protein [Shigella flexneri K-315]
Length = 481
Score = 533 bits (1373), Expect = e-148, Method: Compositional matrix adjust.
Identities = 264/481 (54%), Positives = 358/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRAISG+KT F Y+D IS L + ++ R+I S +GK++ + + + L
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRDSGDGKVQTLGAVGH---SPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE++G+RE G SG GGR+ Y +F ++ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM M+ TGN RRES+AH+P
Sbjct: 300 GTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KPVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|330831346|ref|YP_004394298.1| peptidase U62 modulator of DNA gyrase [Aeromonas veronii B565]
gi|328806482|gb|AEB51681.1| Peptidase U62 modulator of DNA gyrase [Aeromonas veronii B565]
Length = 479
Score = 533 bits (1373), Expect = e-148, Method: Compositional matrix adjust.
Identities = 268/474 (56%), Positives = 359/474 (75%), Gaps = 7/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P DLDE L ++LG++ ++V++ D YFQ + +E+W+LE+GIVK G+++I+QGVGVR
Sbjct: 8 LLAPNDLDEGRLQQLLGSLMSHQVEFGDLYFQRSWHESWMLEDGIVKDGSYNIDQGVGVR 67
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+SG+KT F YSD++S L +V T + + G +K + + N LY D +
Sbjct: 68 AVSGEKTGFAYSDELSLLALQQSV--TAARGIAAAGAHGKVKAWARTEANLLYPAMDPLQ 125
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
+++ +KI LLE+++K AR DP + +V+A++SG Y+ +L+ DG + AD+RPLV+L V
Sbjct: 126 TLDKHQKIALLEQMDKFARSLDPAINQVMASISGVYEEVLVAATDGTLAADVRPLVRLSV 185
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMI-LEK----CVSNSVNSALINLEAKPAPAGI 503
T+I EK RRE G++G GGR+ Y++F ++ LE V +V AL+NLEA APAG
Sbjct: 186 TVIAEKGDRRERGSAGGGGRFGYDWFLELDGLESRAFGYVREAVRQALVNLEAIDAPAGT 245
Query: 504 MKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRG 563
M VVLG GWPG+LLHEA+GHGLEGDFNRKGSSAF+ IG+++ASK TIVD+GTL RRG
Sbjct: 246 MPVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSAFAGRIGEQVASKHCTIVDDGTLPGRRG 305
Query: 564 SINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTY 623
S++IDDEG P LIENGILKGY+QD NARLM + +TGN RRES+A +P+PRMTNTY
Sbjct: 306 SVSIDDEGTPGGYNVLIENGILKGYLQDKQNARLMGVPLTGNGRRESYAAMPMPRMTNTY 365
Query: 624 MLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATL 683
ML G++ P EII+SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I++GKIT P+KGATL
Sbjct: 366 MLAGQYDPAEIIASVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIEDGKITAPIKGATL 425
Query: 684 IGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
IG+GP + +VSM+G+D+ LD GVG+CGK+GQ VPVGVGQPTLK+D +TVGGT
Sbjct: 426 IGNGPEAMSQVSMVGSDLALDRGVGICGKEGQSVPVGVGQPTLKLDQLTVGGTQ 479
>gi|154706950|ref|YP_001423925.1| microcin-processing peptidase 2 (TldD) [Coxiella burnetii Dugway
5J108-111]
gi|154356236|gb|ABS77698.1| microcin-processing peptidase 2 (TldD) [Coxiella burnetii Dugway
5J108-111]
Length = 477
Score = 533 bits (1373), Expect = e-148, Method: Compositional matrix adjust.
Identities = 264/476 (55%), Positives = 348/476 (73%), Gaps = 3/476 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+ A LL PF+L+ +L KI+G VD AD + Q + E+W LE+GIVK GNFSI
Sbjct: 5 IQTASDSLLRPFNLNANVLEKIIGRAMGRSVDGADIFLQSIQEESWFLEDGIVKEGNFSI 64
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+ G G+R +SG++T F ++DDI+ L+ A S +SIA +G+ I + K + LY
Sbjct: 65 DHGFGLRVLSGEETGFAFADDINAKALLQAAHSAKSIAYSQSGQA--INVLHKTLVRPLY 122
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
++ I+S+ + LL RV+ AR KDPRV +VI +L+G+++V+LI +DGL+ AD+R
Sbjct: 123 PTSNPINSMPAASIVDLLRRVDDYARAKDPRVKQVIVSLTGQHEVVLILNSDGLMAADLR 182
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPA 501
PLV + V +IVE+NG+R G++G G R Y FT + +V+ A +NL+A APA
Sbjct: 183 PLVSMRVRVIVEENGQRAQGSAGGGARGGYETFTSAAFQYA-DKAVHQACLNLKADNAPA 241
Query: 502 GIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANR 561
G +VLGPGWP ILLHEAIGHGLEGDFNRKGSSAFS +G+R+AS T+VD+GT+ R
Sbjct: 242 GTFPIVLGPGWPAILLHEAIGHGLEGDFNRKGSSAFSGRLGERVASSLCTVVDDGTVPGR 301
Query: 562 RGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTN 621
RGS++IDDEG TQ T LIE GILK YMQD NA LM MS TGN RRES+AH+P+PRMTN
Sbjct: 302 RGSLSIDDEGTMTQKTVLIEKGILKNYMQDRHNAHLMKMSPTGNGRRESYAHLPLPRMTN 361
Query: 622 TYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGA 681
TY+L G+ P+EII+SV+ GLYA +FSGGQVDIT+GKFVFS S+AY+I+ GK+T PVKGA
Sbjct: 362 TYLLPGESDPQEIIASVERGLYAVDFSGGQVDITSGKFVFSTSEAYLIEKGKVTRPVKGA 421
Query: 682 TLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
TLIG+GP++L KVSM+GND+ LD G+G CGK GQ VPVGVGQPT+K+D++TVGG +
Sbjct: 422 TLIGNGPDVLTKVSMVGNDLALDSGIGTCGKAGQSVPVGVGQPTIKVDALTVGGVD 477
>gi|374334644|ref|YP_005091331.1| microcin-processing peptidase 2 [Oceanimonas sp. GK1]
gi|372984331|gb|AEY00581.1| microcin-processing peptidase 2 [Oceanimonas sp. GK1]
Length = 481
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 269/475 (56%), Positives = 358/475 (75%), Gaps = 9/475 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P +LD +L L + ++++D+AD YFQ + +E+W+LE+GIVK G+++I QGVGVR
Sbjct: 10 LLVPNELDMALLDAQLARLSRHQIDFADLYFQNSVHESWVLEDGIVKDGSYNIEQGVGVR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
A+SG+KT F YSD+++ L AV + R IA +G+ K+ K + + YS + +
Sbjct: 70 AVSGEKTGFAYSDELTAAALDQAVSAARGIAAHGGDGRFKVGK---AQPVVARYSALNPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S++ +KI LL++++ AR +P V +VIA++SG Y+ +L+ DG + D+RPLV+L
Sbjct: 127 DSLSREQKIALLQQMDAFARSLEPAVTQVIASISGVYEEVLVLATDGTLATDLRPLVRLN 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEK-----CVSNSVNSALINLEAKPAPAG 502
+++ E+NGRRE G+SG GGR+ Y+YF + I + V +V AL+NLEA APAG
Sbjct: 187 CSVLAERNGRRERGSSGGGGRFGYDYFLEEIDGQPRALGYVKEAVRQALVNLEAVDAPAG 246
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
M VVLG GWPG+LLHEA+GHGLEGDFNRKGSSA+S IG+++AS TIVD+GTLANRR
Sbjct: 247 TMPVVLGAGWPGVLLHEAVGHGLEGDFNRKGSSAYSGRIGEQVASSLCTIVDDGTLANRR 306
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+ IDDEG + LIENG+LKGYMQD +NARLM M+ TGN RRES+AH+P+PRMTNT
Sbjct: 307 GSLTIDDEGTASGYNVLIENGVLKGYMQDKLNARLMGMAPTGNGRRESYAHLPMPRMTNT 366
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML G+ PEEII SVK G+YA NF GGQVDIT+G+FVFSAS+AY+I++GK+T P+KGAT
Sbjct: 367 YMLPGQTPPEEIIRSVKKGIYAPNFGGGQVDITSGRFVFSASEAYLIEDGKLTAPLKGAT 426
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
LIG+GP + +VSM+GND+ LD GVGVCGKDGQ VPVGVGQPTLK+D +TVGGT
Sbjct: 427 LIGNGPEAMSQVSMVGNDLSLDAGVGVCGKDGQSVPVGVGQPTLKLDRMTVGGTQ 481
>gi|417123860|ref|ZP_11972770.1| TldD/PmbA family protein [Escherichia coli 97.0246]
gi|386147251|gb|EIG93696.1| TldD/PmbA family protein [Escherichia coli 97.0246]
Length = 481
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 263/481 (54%), Positives = 359/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRAISG+KT F Y+D IS L + ++ R+I S +GK++ + ++ + L
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRDSGDGKVQTLGAVEH---SPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE++G+RE G SG GGR+ Y +F ++ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM M+ TGN RRES+AH+P
Sbjct: 300 GTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRM+NTYML GK P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMSNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KPVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|421729290|ref|ZP_16168427.1| protease TldD [Klebsiella oxytoca M5al]
gi|410369832|gb|EKP24576.1| protease TldD [Klebsiella oxytoca M5al]
Length = 481
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 262/481 (54%), Positives = 359/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L+ + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLSANGLNHQDLFTILGQLAERRLDYGDLYFQSSYHESWVLEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D IS+ L + ++ R+I + +GK+ + ++ +SL
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQISRLALEQSAQAARTIVRDHGDGKVHTLGGVE---YSSL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K AR D RV +V A+L+G Y++IL+ DG + AD+
Sbjct: 120 YTSIDPLQSMSREEKLDILRRVDKTARAADKRVQEVSASLTGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE++G+RE G SG GGR+ Y+YF D+ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEEDGKRERGASGGGGRFGYDYFLASQDGDVRADVWAREAVRMALVNLT 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG++ VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS++ T+VD+
Sbjct: 240 AVAAPAGMLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGHMGELVASEKCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ANRRGS+ IDDEG Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTIANRRGSVAIDDEGTQGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV G+YA NF GGQVDIT+GKFVFS S+AY+I+ GK+T
Sbjct: 360 MPRMTNTYMLAGKSTPQEIIESVDYGIYAPNFGGGQVDITSGKFVFSTSEAYLIEKGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
VKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ VPVGVGQPTLK+D +TVGG
Sbjct: 420 KAVKGATLIGSGIEAMQQISMVGNDLKLDSGVGVCGKEGQSVPVGVGQPTLKVDKLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|375110368|ref|ZP_09756592.1| tldD protein [Alishewanella jeotgali KCTC 22429]
gi|397171426|ref|ZP_10494832.1| tldD protein [Alishewanella aestuarii B11]
gi|374569541|gb|EHR40700.1| tldD protein [Alishewanella jeotgali KCTC 22429]
gi|396086961|gb|EJI84565.1| tldD protein [Alishewanella aestuarii B11]
Length = 479
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 262/482 (54%), Positives = 352/482 (73%), Gaps = 9/482 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N L++ +L + L + LG +F +++DYAD YFQ + +E+W+LE+G+VK G+F+I
Sbjct: 1 MNAVEQNLIQASELSARDLEQTLGFLFAHQLDYADLYFQSSVHESWVLEDGLVKDGSFNI 60
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSL 380
+GVGVRAISG+KT F Y+D I+++ L+ A + R IA Q G +K KI
Sbjct: 61 ERGVGVRAISGEKTGFAYADSINRDALMQAAGAARGIAAQGQQGSVKAFSKSGNSKI--- 117
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y + + S++ EK+ LL ++E R D R +V+ +L+G Y+ +L+ +DG DI
Sbjct: 118 YLPCEPLQSLSNTEKVALLHQIEAYIRSLDSRAEQVMVSLTGVYEEVLVAASDGTFATDI 177
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLE 495
RPLV+L ++++ ++GRRE G++G G R +Y YF+ + + ++V A +NL
Sbjct: 178 RPLVRLNCSVLLVQDGRRERGSAGGGARTDYQYFSADVDGQPRWQHYARDAVRMAQVNLT 237
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS FS IG+++ASK TIVD+
Sbjct: 238 AIDAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRKGSSTFSGRIGQQVASKHCTIVDD 297
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTL+ RRGS+NIDDEG P+ LIE G+LKGY+QD NA LM ++ TGN RRESFAH+P
Sbjct: 298 GTLSGRRGSLNIDDEGTPSAYNVLIEKGVLKGYIQDKHNAMLMGVAPTGNGRRESFAHLP 357
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G + PEEII+SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I++GKIT
Sbjct: 358 MPRMTNTYMLAGDYAPEEIIASVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIEDGKIT 417
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
P+KGATLIG+GP +++VSM+GNDMKLD GVGVCGK GQ VPVGVGQPTLK+D++TVGG
Sbjct: 418 APIKGATLIGNGPEAMQQVSMVGNDMKLDSGVGVCGKQGQSVPVGVGQPTLKLDAMTVGG 477
Query: 736 TN 737
T
Sbjct: 478 TQ 479
>gi|22124113|ref|NP_667536.1| protease TldD [Yersinia pestis KIM10+]
gi|45443603|ref|NP_995142.1| protease TldD [Yersinia pestis biovar Microtus str. 91001]
gi|51597849|ref|YP_072040.1| protease TldD [Yersinia pseudotuberculosis IP 32953]
gi|108809676|ref|YP_653592.1| protease TldD [Yersinia pestis Antiqua]
gi|108813659|ref|YP_649426.1| protease TldD [Yersinia pestis Nepal516]
gi|145597595|ref|YP_001161671.1| protease TldD [Yersinia pestis Pestoides F]
gi|153997389|ref|ZP_02022489.1| putative modulator of DNA gyrase [Yersinia pestis CA88-4125]
gi|162418726|ref|YP_001605733.1| protease TldD [Yersinia pestis Angola]
gi|165927608|ref|ZP_02223440.1| TldD protein [Yersinia pestis biovar Orientalis str. F1991016]
gi|165937408|ref|ZP_02225971.1| TldD protein [Yersinia pestis biovar Orientalis str. IP275]
gi|166011416|ref|ZP_02232314.1| TldD protein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166214181|ref|ZP_02240216.1| TldD protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|167402015|ref|ZP_02307498.1| TldD protein [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167420737|ref|ZP_02312490.1| TldD protein [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167425535|ref|ZP_02317288.1| TldD protein [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|186897043|ref|YP_001874155.1| protease TldD [Yersinia pseudotuberculosis PB1/+]
gi|218930683|ref|YP_002348558.1| protease TldD [Yersinia pestis CO92]
gi|229836820|ref|ZP_04456985.1| putative modulator of DNA gyrase [Yersinia pestis Pestoides A]
gi|229839281|ref|ZP_04459440.1| putative modulator of DNA gyrase [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229899844|ref|ZP_04514985.1| putative modulator of DNA gyrase [Yersinia pestis biovar Orientalis
str. India 195]
gi|229904155|ref|ZP_04519266.1| putative modulator of DNA gyrase [Yersinia pestis Nepal516]
gi|270488597|ref|ZP_06205671.1| TldD protein [Yersinia pestis KIM D27]
gi|294505265|ref|YP_003569327.1| putative modulator of DNA gyrase [Yersinia pestis Z176003]
gi|384123732|ref|YP_005506352.1| putative modulator of DNA gyrase [Yersinia pestis D106004]
gi|384127629|ref|YP_005510243.1| putative modulator of DNA gyrase [Yersinia pestis D182038]
gi|384138530|ref|YP_005521232.1| protease TldD [Yersinia pestis A1122]
gi|384416657|ref|YP_005626019.1| putative modulator of DNA gyrase [Yersinia pestis biovar Medievalis
str. Harbin 35]
gi|420548845|ref|ZP_15046612.1| modulator of DNA gyrase family protein [Yersinia pestis PY-01]
gi|420554192|ref|ZP_15051383.1| modulator of DNA gyrase family protein [Yersinia pestis PY-02]
gi|420559804|ref|ZP_15056258.1| modulator of DNA gyrase family protein [Yersinia pestis PY-03]
gi|420565185|ref|ZP_15061096.1| modulator of DNA gyrase family protein [Yersinia pestis PY-04]
gi|420570225|ref|ZP_15065675.1| modulator of DNA gyrase family protein [Yersinia pestis PY-05]
gi|420575891|ref|ZP_15070799.1| modulator of DNA gyrase family protein [Yersinia pestis PY-06]
gi|420581191|ref|ZP_15075620.1| modulator of DNA gyrase family protein [Yersinia pestis PY-07]
gi|420586572|ref|ZP_15080488.1| modulator of DNA gyrase family protein [Yersinia pestis PY-08]
gi|420591676|ref|ZP_15085082.1| modulator of DNA gyrase family protein [Yersinia pestis PY-09]
gi|420597041|ref|ZP_15089904.1| modulator of DNA gyrase family protein [Yersinia pestis PY-10]
gi|420602748|ref|ZP_15094971.1| modulator of DNA gyrase family protein [Yersinia pestis PY-11]
gi|420608139|ref|ZP_15099865.1| modulator of DNA gyrase family protein [Yersinia pestis PY-12]
gi|420613543|ref|ZP_15104704.1| modulator of DNA gyrase family protein [Yersinia pestis PY-13]
gi|420618903|ref|ZP_15109377.1| modulator of DNA gyrase family protein [Yersinia pestis PY-14]
gi|420624214|ref|ZP_15114162.1| modulator of DNA gyrase family protein [Yersinia pestis PY-15]
gi|420629172|ref|ZP_15118660.1| modulator of DNA gyrase family protein [Yersinia pestis PY-16]
gi|420634403|ref|ZP_15123350.1| modulator of DNA gyrase family protein [Yersinia pestis PY-19]
gi|420639629|ref|ZP_15128055.1| modulator of DNA gyrase family protein [Yersinia pestis PY-25]
gi|420645067|ref|ZP_15133027.1| modulator of DNA gyrase family protein [Yersinia pestis PY-29]
gi|420650391|ref|ZP_15137824.1| modulator of DNA gyrase family protein [Yersinia pestis PY-32]
gi|420656014|ref|ZP_15142884.1| modulator of DNA gyrase family protein [Yersinia pestis PY-34]
gi|420661457|ref|ZP_15147744.1| modulator of DNA gyrase family protein [Yersinia pestis PY-36]
gi|420666805|ref|ZP_15152566.1| modulator of DNA gyrase family protein [Yersinia pestis PY-42]
gi|420671660|ref|ZP_15156992.1| modulator of DNA gyrase family protein [Yersinia pestis PY-45]
gi|420677006|ref|ZP_15161856.1| modulator of DNA gyrase family protein [Yersinia pestis PY-46]
gi|420682572|ref|ZP_15166875.1| modulator of DNA gyrase family protein [Yersinia pestis PY-47]
gi|420687978|ref|ZP_15171685.1| modulator of DNA gyrase family protein [Yersinia pestis PY-48]
gi|420698969|ref|ZP_15181338.1| modulator of DNA gyrase family protein [Yersinia pestis PY-53]
gi|420704842|ref|ZP_15185984.1| modulator of DNA gyrase family protein [Yersinia pestis PY-54]
gi|420710123|ref|ZP_15190710.1| modulator of DNA gyrase family protein [Yersinia pestis PY-55]
gi|420715635|ref|ZP_15195595.1| modulator of DNA gyrase family protein [Yersinia pestis PY-56]
gi|420721161|ref|ZP_15200326.1| modulator of DNA gyrase family protein [Yersinia pestis PY-58]
gi|420726610|ref|ZP_15205134.1| modulator of DNA gyrase family protein [Yersinia pestis PY-59]
gi|420732111|ref|ZP_15210080.1| modulator of DNA gyrase family protein [Yersinia pestis PY-60]
gi|420737103|ref|ZP_15214591.1| modulator of DNA gyrase family protein [Yersinia pestis PY-61]
gi|420742582|ref|ZP_15219515.1| modulator of DNA gyrase family protein [Yersinia pestis PY-63]
gi|420748458|ref|ZP_15224456.1| modulator of DNA gyrase family protein [Yersinia pestis PY-64]
gi|420753729|ref|ZP_15229192.1| modulator of DNA gyrase family protein [Yersinia pestis PY-65]
gi|420759681|ref|ZP_15233960.1| modulator of DNA gyrase family protein [Yersinia pestis PY-66]
gi|420764885|ref|ZP_15238568.1| modulator of DNA gyrase family protein [Yersinia pestis PY-71]
gi|420770118|ref|ZP_15243253.1| modulator of DNA gyrase family protein [Yersinia pestis PY-72]
gi|420775101|ref|ZP_15247773.1| modulator of DNA gyrase family protein [Yersinia pestis PY-76]
gi|420780727|ref|ZP_15252716.1| modulator of DNA gyrase family protein [Yersinia pestis PY-88]
gi|420791378|ref|ZP_15262152.1| modulator of DNA gyrase family protein [Yersinia pestis PY-90]
gi|420796948|ref|ZP_15267166.1| modulator of DNA gyrase family protein [Yersinia pestis PY-91]
gi|420807386|ref|ZP_15276587.1| modulator of DNA gyrase family protein [Yersinia pestis PY-93]
gi|420812772|ref|ZP_15281412.1| modulator of DNA gyrase family protein [Yersinia pestis PY-94]
gi|420818236|ref|ZP_15286365.1| modulator of DNA gyrase family protein [Yersinia pestis PY-95]
gi|420823594|ref|ZP_15291155.1| modulator of DNA gyrase family protein [Yersinia pestis PY-96]
gi|420828657|ref|ZP_15295719.1| modulator of DNA gyrase family protein [Yersinia pestis PY-98]
gi|420834250|ref|ZP_15300766.1| modulator of DNA gyrase family protein [Yersinia pestis PY-99]
gi|420839189|ref|ZP_15305230.1| modulator of DNA gyrase family protein [Yersinia pestis PY-100]
gi|420844382|ref|ZP_15309942.1| modulator of DNA gyrase family protein [Yersinia pestis PY-101]
gi|420850036|ref|ZP_15315020.1| modulator of DNA gyrase family protein [Yersinia pestis PY-102]
gi|420855754|ref|ZP_15319846.1| modulator of DNA gyrase family protein [Yersinia pestis PY-103]
gi|420860853|ref|ZP_15324343.1| modulator of DNA gyrase family protein [Yersinia pestis PY-113]
gi|421765188|ref|ZP_16201974.1| protease TldD [Yersinia pestis INS]
gi|21956865|gb|AAM83787.1|AE013619_8 PmbA/TldD family protein [Yersinia pestis KIM10+]
gi|45438473|gb|AAS64019.1| putative modulator of DNA gyrase [Yersinia pestis biovar Microtus
str. 91001]
gi|51591131|emb|CAH22796.1| putative modulator of DNA gyrase [Yersinia pseudotuberculosis IP
32953]
gi|108777307|gb|ABG19826.1| microcin-processing peptidase 2. Unknown type peptidase. MEROPS
family U62 [Yersinia pestis Nepal516]
gi|108781589|gb|ABG15647.1| microcin-processing peptidase 2. Unknown type peptidase. MEROPS
family U62 [Yersinia pestis Antiqua]
gi|115349294|emb|CAL22261.1| putative modulator of DNA gyrase [Yersinia pestis CO92]
gi|145209291|gb|ABP38698.1| modulator of DNA gyrase [Yersinia pestis Pestoides F]
gi|149289026|gb|EDM39106.1| putative modulator of DNA gyrase [Yersinia pestis CA88-4125]
gi|162351541|gb|ABX85489.1| TldD protein [Yersinia pestis Angola]
gi|165914513|gb|EDR33127.1| TldD protein [Yersinia pestis biovar Orientalis str. IP275]
gi|165920502|gb|EDR37779.1| TldD protein [Yersinia pestis biovar Orientalis str. F1991016]
gi|165989800|gb|EDR42101.1| TldD protein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166204668|gb|EDR49148.1| TldD protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|166961543|gb|EDR57564.1| TldD protein [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167048601|gb|EDR60009.1| TldD protein [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167055549|gb|EDR65342.1| TldD protein [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|186700069|gb|ACC90698.1| peptidase U62 modulator of DNA gyrase [Yersinia pseudotuberculosis
PB1/+]
gi|229678273|gb|EEO74378.1| putative modulator of DNA gyrase [Yersinia pestis Nepal516]
gi|229687336|gb|EEO79411.1| putative modulator of DNA gyrase [Yersinia pestis biovar Orientalis
str. India 195]
gi|229695647|gb|EEO85694.1| putative modulator of DNA gyrase [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229705763|gb|EEO91772.1| putative modulator of DNA gyrase [Yersinia pestis Pestoides A]
gi|262363328|gb|ACY60049.1| putative modulator of DNA gyrase [Yersinia pestis D106004]
gi|262367293|gb|ACY63850.1| putative modulator of DNA gyrase [Yersinia pestis D182038]
gi|270337101|gb|EFA47878.1| TldD protein [Yersinia pestis KIM D27]
gi|294355724|gb|ADE66065.1| putative modulator of DNA gyrase [Yersinia pestis Z176003]
gi|320017161|gb|ADW00733.1| putative modulator of DNA gyrase [Yersinia pestis biovar Medievalis
str. Harbin 35]
gi|342853659|gb|AEL72212.1| protease TldD [Yersinia pestis A1122]
gi|391421672|gb|EIQ84342.1| modulator of DNA gyrase family protein [Yersinia pestis PY-01]
gi|391421856|gb|EIQ84504.1| modulator of DNA gyrase family protein [Yersinia pestis PY-02]
gi|391422047|gb|EIQ84671.1| modulator of DNA gyrase family protein [Yersinia pestis PY-03]
gi|391436816|gb|EIQ97738.1| modulator of DNA gyrase family protein [Yersinia pestis PY-04]
gi|391437961|gb|EIQ98766.1| modulator of DNA gyrase family protein [Yersinia pestis PY-05]
gi|391441639|gb|EIR02111.1| modulator of DNA gyrase family protein [Yersinia pestis PY-06]
gi|391453849|gb|EIR13116.1| modulator of DNA gyrase family protein [Yersinia pestis PY-07]
gi|391454067|gb|EIR13313.1| modulator of DNA gyrase family protein [Yersinia pestis PY-08]
gi|391456155|gb|EIR15208.1| modulator of DNA gyrase family protein [Yersinia pestis PY-09]
gi|391469800|gb|EIR27538.1| modulator of DNA gyrase family protein [Yersinia pestis PY-10]
gi|391470351|gb|EIR28026.1| modulator of DNA gyrase family protein [Yersinia pestis PY-11]
gi|391471820|gb|EIR29344.1| modulator of DNA gyrase family protein [Yersinia pestis PY-12]
gi|391485473|gb|EIR41610.1| modulator of DNA gyrase family protein [Yersinia pestis PY-13]
gi|391487023|gb|EIR43001.1| modulator of DNA gyrase family protein [Yersinia pestis PY-15]
gi|391487129|gb|EIR43097.1| modulator of DNA gyrase family protein [Yersinia pestis PY-14]
gi|391501683|gb|EIR56056.1| modulator of DNA gyrase family protein [Yersinia pestis PY-16]
gi|391501834|gb|EIR56196.1| modulator of DNA gyrase family protein [Yersinia pestis PY-19]
gi|391506668|gb|EIR60568.1| modulator of DNA gyrase family protein [Yersinia pestis PY-25]
gi|391517611|gb|EIR70397.1| modulator of DNA gyrase family protein [Yersinia pestis PY-29]
gi|391518770|gb|EIR71462.1| modulator of DNA gyrase family protein [Yersinia pestis PY-34]
gi|391519550|gb|EIR72175.1| modulator of DNA gyrase family protein [Yersinia pestis PY-32]
gi|391532131|gb|EIR83560.1| modulator of DNA gyrase family protein [Yersinia pestis PY-36]
gi|391534950|gb|EIR86074.1| modulator of DNA gyrase family protein [Yersinia pestis PY-42]
gi|391537395|gb|EIR88298.1| modulator of DNA gyrase family protein [Yersinia pestis PY-45]
gi|391550485|gb|EIS00096.1| modulator of DNA gyrase family protein [Yersinia pestis PY-46]
gi|391550688|gb|EIS00277.1| modulator of DNA gyrase family protein [Yersinia pestis PY-47]
gi|391550995|gb|EIS00552.1| modulator of DNA gyrase family protein [Yersinia pestis PY-48]
gi|391566593|gb|EIS14566.1| modulator of DNA gyrase family protein [Yersinia pestis PY-53]
gi|391570414|gb|EIS17884.1| modulator of DNA gyrase family protein [Yersinia pestis PY-54]
gi|391580096|gb|EIS26131.1| modulator of DNA gyrase family protein [Yersinia pestis PY-55]
gi|391581726|gb|EIS27577.1| modulator of DNA gyrase family protein [Yersinia pestis PY-56]
gi|391592256|gb|EIS36703.1| modulator of DNA gyrase family protein [Yersinia pestis PY-58]
gi|391595674|gb|EIS39689.1| modulator of DNA gyrase family protein [Yersinia pestis PY-60]
gi|391596493|gb|EIS40426.1| modulator of DNA gyrase family protein [Yersinia pestis PY-59]
gi|391610212|gb|EIS52527.1| modulator of DNA gyrase family protein [Yersinia pestis PY-61]
gi|391610533|gb|EIS52805.1| modulator of DNA gyrase family protein [Yersinia pestis PY-63]
gi|391612181|gb|EIS54278.1| modulator of DNA gyrase family protein [Yersinia pestis PY-64]
gi|391623522|gb|EIS64298.1| modulator of DNA gyrase family protein [Yersinia pestis PY-65]
gi|391626918|gb|EIS67192.1| modulator of DNA gyrase family protein [Yersinia pestis PY-66]
gi|391633875|gb|EIS73222.1| modulator of DNA gyrase family protein [Yersinia pestis PY-71]
gi|391635585|gb|EIS74725.1| modulator of DNA gyrase family protein [Yersinia pestis PY-72]
gi|391645905|gb|EIS83728.1| modulator of DNA gyrase family protein [Yersinia pestis PY-76]
gi|391649068|gb|EIS86507.1| modulator of DNA gyrase family protein [Yersinia pestis PY-88]
gi|391658890|gb|EIS95247.1| modulator of DNA gyrase family protein [Yersinia pestis PY-90]
gi|391666524|gb|EIT01979.1| modulator of DNA gyrase family protein [Yersinia pestis PY-91]
gi|391675827|gb|EIT10309.1| modulator of DNA gyrase family protein [Yersinia pestis PY-93]
gi|391676539|gb|EIT10935.1| modulator of DNA gyrase family protein [Yersinia pestis PY-94]
gi|391690047|gb|EIT23117.1| modulator of DNA gyrase family protein [Yersinia pestis PY-95]
gi|391692186|gb|EIT25049.1| modulator of DNA gyrase family protein [Yersinia pestis PY-96]
gi|391693885|gb|EIT26594.1| modulator of DNA gyrase family protein [Yersinia pestis PY-98]
gi|391707296|gb|EIT38657.1| modulator of DNA gyrase family protein [Yersinia pestis PY-99]
gi|391710224|gb|EIT41311.1| modulator of DNA gyrase family protein [Yersinia pestis PY-100]
gi|391710659|gb|EIT41692.1| modulator of DNA gyrase family protein [Yersinia pestis PY-101]
gi|391723116|gb|EIT52846.1| modulator of DNA gyrase family protein [Yersinia pestis PY-102]
gi|391723453|gb|EIT53134.1| modulator of DNA gyrase family protein [Yersinia pestis PY-103]
gi|391726550|gb|EIT55883.1| modulator of DNA gyrase family protein [Yersinia pestis PY-113]
gi|411173618|gb|EKS43660.1| protease TldD [Yersinia pestis INS]
Length = 481
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 264/481 (54%), Positives = 354/481 (73%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L+ LL L+ + L +LG + + ++DYAD YFQ + +E W+LE+ I+K G+++I
Sbjct: 3 LSFVSEQLLTANKLNHQDLFSVLGQLTERRLDYADLYFQSSYHEAWVLEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D I+ N L + + RSI + NGK+ + +I +L
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQITLNALQQSAHAARSIVRDTGNGKVH---TLGEIAYQAL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y D + S++ +KI LL RV+K+AR D RV +V A+L+G Y+ IL+ DG + AD+
Sbjct: 120 YPLLDPLQSLSREDKIALLHRVDKVARAADKRVQEVSASLTGVYEQILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLE 495
RPLV+L V+++VE NG+RE G G GGR+ Y+YF + + + + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEDNGKRERGACGGGGRFGYDYFLETVDGEVRADNFANEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+GSS FS +GK +AS+ T+VD+
Sbjct: 240 AIAAPAGAMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGSSVFSGQMGKLVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTMQGRRGSLAIDDEGVPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G+ PE+II+SV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+ GKIT
Sbjct: 360 MPRMTNTYMLAGQSTPEDIIASVEYGLYAPNFGGGQVDITSGKFVFSTSEAYLIEKGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
+ VKGATLIG G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 HAVKGATLIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|416265562|ref|ZP_11641347.1| protease TldD [Shigella dysenteriae CDC 74-1112]
gi|320175959|gb|EFW51035.1| protease TldD [Shigella dysenteriae CDC 74-1112]
Length = 481
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 263/481 (54%), Positives = 359/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSL 380
+QGVGVRAISG+KT F Y+D IS L + ++ R+I + S+GK++ + + + L
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRDSSDGKVQTLGAVGH---SPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE++G+RE G SG GGR+ Y +F ++ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLDGEVRADTWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM M+ TGN RRES+AH+P
Sbjct: 300 GTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PV+GATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KPVRGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|442609596|ref|ZP_21024333.1| TldD protein, part of proposed TldE/TldD proteolytic complex (PMID
12029038) [Pseudoalteromonas luteoviolacea B = ATCC
29581]
gi|441749068|emb|CCQ10395.1| TldD protein, part of proposed TldE/TldD proteolytic complex
[Pseudoalteromonas luteoviolacea B = ATCC 29581]
Length = 479
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 257/480 (53%), Positives = 346/480 (72%), Gaps = 7/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N LL L + L L + ++VDYAD YFQ + +E W+LE+G+VK G ++I
Sbjct: 1 MNQVEKHLLADSQLCREQLADTLAYIHSHQVDYADLYFQSSYHETWVLEDGLVKEGTYNI 60
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+GVGVRA+SG+KT F YSD I+ L A ++ RSIA G K ++ ++ +
Sbjct: 61 ERGVGVRAVSGEKTGFSYSDAINVEALNKAAEAARSIAQA--GDSKTVQVFSDVRAPLQF 118
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
ISS+ +K+ LL VE R P +V++++S Y+ +LI +DG DIR
Sbjct: 119 HDKQPISSMTDADKVSLLREVENAIRELAPEAEQVVSSMSAVYEQVLIAASDGTFATDIR 178
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDM-----ILEKCVSNSVNSALINLEA 496
PLV+L ++++ ++GRRE G++G G R +Y+YF ++ +V A +NL+A
Sbjct: 179 PLVRLNCSVLLNRDGRRERGSAGGGARLDYHYFRELENGQPRWLSYAQEAVRQARVNLDA 238
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+SAFS IG+++AS T+VD+G
Sbjct: 239 IDAPAGTMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGASAFSGRIGEQVASPLCTVVDDG 298
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+A+RRGS+N+DDEG P LIENGILKGYMQD +NARLM ++ TGNARRES+AH+P+
Sbjct: 299 TMADRRGSLNVDDEGTPAAYNVLIENGILKGYMQDKLNARLMGVAPTGNARRESYAHLPM 358
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ ++IIS+VK G++A+NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 359 PRMTNTYMLAGEHTQQDIISTVKKGVFASNFGGGQVDITSGKFVFSASEAYLIENGKITR 418
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG+GP++++K+SM+GND+ LD GVGVCGKDGQ VPVGVGQP+LKID ITVGGT
Sbjct: 419 PIKGATLIGNGPDVMQKISMVGNDLCLDRGVGVCGKDGQSVPVGVGQPSLKIDEITVGGT 478
>gi|153950166|ref|YP_001399398.1| protease TldD [Yersinia pseudotuberculosis IP 31758]
gi|170022723|ref|YP_001719228.1| protease TldD [Yersinia pseudotuberculosis YPIII]
gi|152961661|gb|ABS49122.1| TldD protein [Yersinia pseudotuberculosis IP 31758]
gi|169749257|gb|ACA66775.1| peptidase U62 modulator of DNA gyrase [Yersinia pseudotuberculosis
YPIII]
Length = 481
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 264/481 (54%), Positives = 354/481 (73%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L+ LL L+ + L +LG + + ++DYAD YFQ + +E W+LE+ I+K G+++I
Sbjct: 3 LSFVSEQLLTANKLNHEDLFSVLGQLTERRLDYADLYFQSSYHEAWVLEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D I+ N L + + RSI + NGK+ + +I +L
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQITLNALQQSAHAARSIVRDTGNGKVH---TLGEIAYQAL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y D + S++ +KI LL RV+K+AR D RV +V A+L+G Y+ IL+ DG + AD+
Sbjct: 120 YPLLDPLQSLSREDKIALLHRVDKVARAADKRVQEVSASLTGVYEQILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLE 495
RPLV+L V+++VE NG+RE G G GGR+ Y+YF + + + + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEDNGKRERGACGGGGRFGYDYFLETVDGEVRADNFANEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+GSS FS +GK +AS+ T+VD+
Sbjct: 240 AIAAPAGAMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGSSVFSGQMGKLVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTMQGRRGSLAIDDEGVPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G+ PE+II+SV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+ GKIT
Sbjct: 360 MPRMTNTYMLAGQSTPEDIIASVEYGLYAPNFGGGQVDITSGKFVFSTSEAYLIEKGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
+ VKGATLIG G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 HAVKGATLIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|294139081|ref|YP_003555059.1| tldD protein [Shewanella violacea DSS12]
gi|293325550|dbj|BAJ00281.1| tldD protein [Shewanella violacea DSS12]
Length = 483
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 264/480 (55%), Positives = 355/480 (73%), Gaps = 9/480 (1%)
Query: 263 NIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSIN 322
+ +S+L LD+ L L + + +VD++D YFQ +++E+W+LE+GIVK G+F I
Sbjct: 6 QVEQSLLQGGLSLDD--LQGYLKLIHQYEVDFSDLYFQGSRHESWVLEDGIVKEGSFHIE 63
Query: 323 QGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYS 382
+GVGVRAI+G+KT F Y+D+I+ L + ++ RSIA GK ++ K+ ++ +LY
Sbjct: 64 RGVGVRAITGEKTGFAYADEITPAALTASAEAARSIAVH-GGKSTKVQAWKRREMKALYQ 122
Query: 383 FTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRP 442
D I+++ +KI+LL++ + R D R+I+V+ +LSG ++ ILI +DG + ADIRP
Sbjct: 123 SADPIAAMEEIKKIELLKQADAYIRSLDSRIIQVVISLSGVHEEILIVASDGTLAADIRP 182
Query: 443 LVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF---TDMILEKCVS---NSVNSALINLEA 496
LV+ ++I+E NG+RE G SG GGR++Y D L C S +V A +NL A
Sbjct: 183 LVRFNCSVILEDNGKREHGASGGGGRHDYQVLMETDDKGLPVCFSFAREAVRQASVNLTA 242
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M V+LGPGWPG+LLHEA+GHGLEGDFNRKGSSAFS +G+++ASK +T+VD+G
Sbjct: 243 IDAPAGEMPVILGPGWPGVLLHEAVGHGLEGDFNRKGSSAFSGKVGQQVASKLVTVVDDG 302
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS++IDDEG TQ T LI++GILKGYMQD +NARLM TGN RRES+AH+P+
Sbjct: 303 TMVNRRGSLSIDDEGVQTQKTVLIQDGILKGYMQDKLNARLMGEQSTGNGRRESYAHLPM 362
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYM G+ P E+I SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NG++T
Sbjct: 363 PRMTNTYMEAGESDPAEMIKSVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIENGEVTQ 422
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
+KGATLIG+GP + ++SM+GND+ LD GVGVCGKDGQ VPVGVGQPTLKID ITVGGT
Sbjct: 423 AIKGATLIGNGPEAMCQISMVGNDLALDQGVGVCGKDGQSVPVGVGQPTLKIDKITVGGT 482
>gi|375257616|ref|YP_005016786.1| protease TldD [Klebsiella oxytoca KCTC 1686]
gi|397660232|ref|YP_006500934.1| TldD protein [Klebsiella oxytoca E718]
gi|402840080|ref|ZP_10888549.1| TldD protein [Klebsiella sp. OBRC7]
gi|423105113|ref|ZP_17092815.1| protein tldD [Klebsiella oxytoca 10-5242]
gi|365907094|gb|AEX02547.1| protease TldD [Klebsiella oxytoca KCTC 1686]
gi|376381879|gb|EHS94615.1| protein tldD [Klebsiella oxytoca 10-5242]
gi|394343774|gb|AFN29895.1| TldD protein [Klebsiella oxytoca E718]
gi|402287030|gb|EJU35490.1| TldD protein [Klebsiella sp. OBRC7]
Length = 481
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 262/481 (54%), Positives = 358/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L+ + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLSANGLNHQDLFTILGQLAERRLDYGDLYFQSSYHESWVLEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D IS+ L + ++ R+I + +GK+ + ++ SL
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQISRLALEQSAQAARTIVRDHGDGKVHTLGGVEH---RSL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K AR D RV +V A+L+G Y++IL+ DG + AD+
Sbjct: 120 YTSIDPLQSMSREEKLDILRRVDKTARAADKRVQEVSASLTGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE++G+RE G SG GGR+ Y+YF D+ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEEDGKRERGASGGGGRFGYDYFLDSQDGDVRADVWAREAVRMALVNLT 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG++ VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGMLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGHMGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+A+RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTIAHRRGSLAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV G+YA NF GGQVDIT+GKFVFS S+AY+I+ GK+T
Sbjct: 360 MPRMTNTYMLAGKSTPQEIIESVDYGIYAPNFGGGQVDITSGKFVFSTSEAYLIEKGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
VKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ VPVGVGQPTLK+D +TVGG
Sbjct: 420 KAVKGATLIGSGIEAMQQISMVGNDLKLDSGVGVCGKEGQSVPVGVGQPTLKVDKLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|145300788|ref|YP_001143629.1| TldD protein, suppresses the inhibitory activity of the carbon
storage regulator (csrA) [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142853560|gb|ABO91881.1| TldD protein, suppresses the inhibitory activity of the carbon
storage regulator (csrA) [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 482
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 273/481 (56%), Positives = 361/481 (75%), Gaps = 7/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L+ + LL P DLDE L ++LG++ ++V++ D YFQ + +E+W+LE+GIVK G+++I
Sbjct: 4 LSQVSASLLAPNDLDEGRLQQLLGSLMSHQVEFGDLYFQRSWHESWMLEDGIVKDGSYNI 63
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QGVGVRA+SG+KT F YSD++S L +V T + + G +K + + N LY
Sbjct: 64 DQGVGVRAVSGEKTGFAYSDELSLLALQQSV--TAARGIAAAGAQGNVKAWARTEANLLY 121
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
D + +++ +KI LLE+++K AR DP + +V+A++SG Y+ IL+ DG + ADIR
Sbjct: 122 PAMDPLQTLDKHQKIALLEQMDKFARSLDPVINQVMASISGVYEEILVAATDGTLAADIR 181
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-LEK----CVSNSVNSALINLEA 496
PLV+L VT+I EK RRE G++G GGR Y+YF ++ LE V +V AL+NLEA
Sbjct: 182 PLVRLSVTVIAEKGERRERGSAGGGGRCGYDYFLELDGLESRAFGYVREAVRQALVNLEA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSSAF+ IG+++ASK TIVD+G
Sbjct: 242 IDAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRKGSSAFAGRIGEQVASKHCTIVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL RRGS++IDDEG P LIENGILKGY+QD NARLM + +TGN RRES+A +P+
Sbjct: 302 TLPGRRGSVSIDDEGTPGGYNVLIENGILKGYLQDKQNARLMGVPLTGNGRRESYAAMPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G++ P EII+SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I++GKIT
Sbjct: 362 PRMTNTYMLAGQYDPAEIIASVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIEDGKITT 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG+GP + VSM+G+D++LD GVGVCGK+GQ VPVGVGQPTLK+D +TVGGT
Sbjct: 422 PIKGATLIGNGPEAMSLVSMVGSDLELDRGVGVCGKEGQSVPVGVGQPTLKLDQLTVGGT 481
Query: 737 N 737
Sbjct: 482 Q 482
>gi|268600323|ref|ZP_06134490.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
gi|268584454|gb|EEZ49130.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
Length = 494
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 263/486 (54%), Positives = 355/486 (73%), Gaps = 4/486 (0%)
Query: 253 LISQKNIHPLNIA-RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEE 311
+ +HP A ++ LLE L ++ K L + + VDYAD Y Q T E+W LEE
Sbjct: 9 FLCADTMHPTYSAVQARLLEANRLSPELFAKSLCIIGAHHVDYADIYCQRTAYESWHLEE 68
Query: 312 GIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKN 371
GIVK+G+F I+QGVGVRA+SGDKTAF Y+D + +++ + ++ R+I + GK+ K
Sbjct: 69 GIVKSGSFQIDQGVGVRAVSGDKTAFAYADSLCIDSINRSARAVRAI-GAAGGKVSA-KM 126
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ + + S +D I+ ++ K+ LL +VE IA+ DPR+++V+A L+ EYD++ + R
Sbjct: 127 PSETRGKPVCSASDPIAGLDSAAKVALLNKVEAIAKAADPRIVQVMAGLTCEYDMVYLAR 186
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL 491
DG ADIRP+V+L VT+I ++ RRE G +G GGRY+ YF + ++ + V +V AL
Sbjct: 187 LDGKHAADIRPMVRLNVTVIAKQGERREQGGAGGGGRYDLAYFDETLVRQFVDAAVKQAL 246
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
NLE++PAPAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S FS IG+R+A+K +T
Sbjct: 247 TNLESRPAPAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKGTSVFSGRIGERVAAKGVT 306
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
+VD G +A RRGS+NIDDEGN T+ T LIE+GIL GYMQD NARL TGN RR+S+
Sbjct: 307 VVDQGDIAGRRGSLNIDDEGNETRRTVLIEDGILVGYMQDETNARLTGTQSTGNGRRQSY 366
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
A +P+PRMTNT+M NG + PEEII+S+ G+YA NF GGQVDIT+GKFVF AS+A+ ++
Sbjct: 367 ASVPMPRMTNTFMENGSYEPEEIIASIDKGIYAVNFGGGQVDITSGKFVFGASEAWWVEG 426
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS- 730
G++ YPVKGAT+IG+GP +LK VSMIGND LD GVGVCGK+GQ VPVGVGQPTL+ID+
Sbjct: 427 GRLQYPVKGATIIGNGPEVLKHVSMIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAG 486
Query: 731 ITVGGT 736
+TVGG+
Sbjct: 487 LTVGGS 492
>gi|188532447|ref|YP_001906244.1| protease TldD [Erwinia tasmaniensis Et1/99]
gi|188027489|emb|CAO95336.1| Modulator of DNA gyrase [Erwinia tasmaniensis Et1/99]
Length = 481
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 264/481 (54%), Positives = 352/481 (73%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL ++ + L ILG + + K+DYAD YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLTANNVSQSDLFSILGQLSERKLDYADLYFQSSFHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSL 380
+QGVGVRAISG+KT F Y+D I+ N L + + RSI Q NG+ + + + +L
Sbjct: 63 DQGVGVRAISGEKTGFAYADQITLNALHQSATAARSIVREQGNGQSRTLGAVAH---RAL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y D + S+ EKI LL RV+ AR D RV +V A+L+G Y+ +L+ DG + AD+
Sbjct: 120 YPALDPLQSLTREEKIALLHRVDSAARAADKRVQEVSASLTGVYEQVLVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V++ VE+NG+RE G+SG GGR+ Y +F ++ E +V AL+NL+
Sbjct: 180 RPLVRLSVSVQVEENGKRERGSSGGGGRFGYEFFLANEAGEVRAEAWAREAVRMALVNLD 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+R+AS+ T+VD+
Sbjct: 240 AVAAPAGTIPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSMFSGQMGQRVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ RGS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTIDGLRGSLAIDDEGVPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G+ P+EII SV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLAGQSTPQEIIESVEYGLYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK+D +TVGG
Sbjct: 420 RPVKGATLIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLDRLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|127511344|ref|YP_001092541.1| C69 family peptidase [Shewanella loihica PV-4]
gi|126636639|gb|ABO22282.1| peptidase U62, modulator of DNA gyrase [Shewanella loihica PV-4]
Length = 482
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 260/481 (54%), Positives = 356/481 (74%), Gaps = 12/481 (2%)
Query: 263 NIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSIN 322
+ +S+L + LD+ L + ++ +++VD++D YFQ +++E+W+LE+GIVK G+F I
Sbjct: 6 QVEQSLLQDGLSLDQ--LQGYINSIHQHQVDFSDLYFQGSRHESWVLEDGIVKEGSFHIE 63
Query: 323 QGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSN-GKIKIIKNIKKIKINSLY 381
+GVGVRAISG+KT F Y+D+I+ L AV++ R I+ N G+++ K + K+ LY
Sbjct: 64 RGVGVRAISGEKTGFAYADEITPAALSAAVEAARGISAAGNSGRVQAWK---QHKVTPLY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
D I+++ +KI LL++ + R DPR+I+V+ +LSG ++ IL+ +DG + ADIR
Sbjct: 121 QSADPIAAMEEVKKIALLKQADAYVRSLDPRIIQVVISLSGVHEEILVAASDGTLAADIR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF---TDMILEKCVS---NSVNSALINLE 495
PLV+ ++++E+ G+RE G SG GGR++Y F D L C + +V A +NL
Sbjct: 181 PLVRFNCSVVLEQEGKRERGASGGGGRHDYQVFFESGDDGLPSCFAFAREAVRQASVNLT 240
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSSAFS +G+++AS +T+VD+
Sbjct: 241 AIDAPAGEMPVVLGAGWPGVLLHEAVGHGLEGDFNRKGSSAFSGLVGQQVASSLVTVVDD 300
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTL NRRGS++IDDEG PTQ T LI++GILKGYMQD +N RLM + TGN RRES+AH+P
Sbjct: 301 GTLENRRGSLSIDDEGVPTQKTVLIQDGILKGYMQDKLNGRLMGQASTGNGRRESYAHLP 360
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYM G PE+II SV G+YA NF GGQVDIT+GKFVFSAS+AY+I+ G+IT
Sbjct: 361 MPRMTNTYMEAGDSSPEDIIKSVDKGIYAPNFGGGQVDITSGKFVFSASEAYLIEKGEIT 420
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
+KGATLIG+GP + ++SM+GND+ LD GVGVCGKDGQ VPVGVGQP+LK+D +TVGG
Sbjct: 421 QAIKGATLIGNGPEAMGQLSMVGNDLALDKGVGVCGKDGQSVPVGVGQPSLKLDRLTVGG 480
Query: 736 T 736
T
Sbjct: 481 T 481
>gi|329295760|ref|ZP_08253096.1| protease TldD [Plautia stali symbiont]
Length = 481
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 259/481 (53%), Positives = 345/481 (71%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL ++++ L +LG + + ++DYAD YFQ + +E+W+LE+ I+K G++ I
Sbjct: 3 LNLVSEQLLAANSINQQDLFSLLGQLSERRLDYADLYFQSSFHESWVLEDKIIKDGSYHI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D IS N L + ++ RSI Q NGK + + +L
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQISLNALRQSSEAARSIVREQGNGKAHALSAVLN---RAL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ + + S+ +KI LL V+K+AR DPRV +V A+LSG Y+ +L+ DG + ADI
Sbjct: 120 YAPVNPLDSLTREDKIALLHWVDKVARTADPRVQEVNASLSGVYEQVLVAATDGTLAADI 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L +++ VE G+RE G SG G R Y +F D+ + +V AL+NL
Sbjct: 180 RPLVRLSISVQVEDQGKRERGASGGGARTGYEFFLADESGDVRADVWAREAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+ +S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRETSVFSGKMGQLVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTL RGS+ +DDEG P Q LIENG+LKGYMQD +NARLM + TGN RRES+AH+P
Sbjct: 300 GTLEGLRGSLAVDDEGVPGQYNVLIENGVLKGYMQDKLNARLMGVPPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML K P+EII SV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLACKSTPQEIIESVEYGLYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+ LD GVG+CGK+GQ VPVGVGQPTLK+D ITVGG
Sbjct: 420 KPVKGATLIGSGIEAMQQISMVGNDLALDKGVGMCGKEGQSVPVGVGQPTLKLDKITVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|378956981|ref|YP_005214468.1| TldD protein [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum str. RKS5078]
gi|438148557|ref|ZP_20876343.1| protease TldD [Salmonella enterica subsp. enterica serovar Pullorum
str. ATCC 9120]
gi|357207592|gb|AET55638.1| TldD protein [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum str. RKS5078]
gi|434938195|gb|ELL45205.1| protease TldD [Salmonella enterica subsp. enterica serovar Pullorum
str. ATCC 9120]
Length = 481
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 263/480 (54%), Positives = 357/480 (74%), Gaps = 7/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L+ + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLNHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QGVGVRAISG+KT F Y+D IS L + ++ R+I + NG+ K+ K + + LY
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRE-NGEGKV-KTLAAVAHQPLY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ D + S++ EK+ +L RV+K+AR D RV +V A+L+G Y++IL+ DG + AD+R
Sbjct: 121 TTLDPLQSMSREEKLDILRRVDKVAREADKRVQEVNASLTGVYELILVAATDGTLAADVR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L V++ VE++G+RE G SG GGR+ Y YF ++ + +V AL+NL A
Sbjct: 181 PLVRLSVSVQVEEDGKRERGASGGGGRFGYEYFLADLDGEVRADAWAKEAVRMALVNLSA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG+++AS T+VD+G
Sbjct: 241 VAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQIGEQVASALCTVVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS+ IDDEG P Q LIENG+LKGYMQD +NARLM + TGN RRES+AH+P+
Sbjct: 301 TMMNRRGSVAIDDEGTPGQYNVLIENGVLKGYMQDKLNARLMGAAPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 361 PRMTNTYMLAGQSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTT 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGGT
Sbjct: 421 PVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGGT 480
>gi|164686099|ref|ZP_01947632.2| TldD protein [Coxiella burnetii 'MSU Goat Q177']
gi|212219191|ref|YP_002305978.1| microcin-processing peptidase 2 [Coxiella burnetii CbuK_Q154]
gi|164601661|gb|EAX31746.2| TldD protein [Coxiella burnetii 'MSU Goat Q177']
gi|212013453|gb|ACJ20833.1| microcin-processing peptidase 2 [Coxiella burnetii CbuK_Q154]
Length = 477
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 264/476 (55%), Positives = 348/476 (73%), Gaps = 3/476 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+ A LL PF+L+ +L KI+G VD AD + Q + E+W LE+GIVK GNFSI
Sbjct: 5 IQTASDSLLRPFNLNANVLEKIIGRAMGRSVDGADIFLQSIQEESWFLEDGIVKEGNFSI 64
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+ G G+R +SG++T F ++DDI+ L+ A S +SIA +G+ I + K + LY
Sbjct: 65 DHGFGLRVLSGEETGFAFADDINAKALLQAAHSAKSIAYSQSGQA--INVLHKTLVRPLY 122
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
++ I+S+ + LL RV+ AR KDPRV +VI +L+G+++V+LI +DGL+ AD+R
Sbjct: 123 PPSNPINSMPAASIVDLLRRVDDYARAKDPRVKQVIVSLTGQHEVVLILNSDGLMAADLR 182
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPA 501
PLV + V +IVE+NG+R G++G G R Y FT + +V+ A +NL+A APA
Sbjct: 183 PLVSMRVRVIVEENGQRAQGSAGGGARGGYETFTSAAFQYA-DKAVHQACLNLKADNAPA 241
Query: 502 GIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANR 561
G +VLGPGWP ILLHEAIGHGLEGDFNRKGSSAFS +G+R+AS T+VD+GT+ R
Sbjct: 242 GTFPIVLGPGWPAILLHEAIGHGLEGDFNRKGSSAFSGRLGERVASSLCTVVDDGTVPGR 301
Query: 562 RGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTN 621
RGS++IDDEG TQ T LIE GILK YMQD NA LM MS TGN RRES+AH+P+PRMTN
Sbjct: 302 RGSLSIDDEGTMTQKTVLIEKGILKNYMQDRHNAHLMKMSPTGNGRRESYAHLPLPRMTN 361
Query: 622 TYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGA 681
TY+L G+ P+EII+SV+ GLYA +FSGGQVDIT+GKFVFS S+AY+I+ GK+T PVKGA
Sbjct: 362 TYLLPGESDPQEIIASVERGLYAVDFSGGQVDITSGKFVFSTSEAYLIEKGKVTRPVKGA 421
Query: 682 TLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
TLIG+GP++L KVSM+GND+ LD G+G CGK GQ VPVGVGQPT+K+D++TVGG +
Sbjct: 422 TLIGNGPDVLTKVSMVGNDLALDSGIGTCGKAGQSVPVGVGQPTIKVDALTVGGVD 477
>gi|403057615|ref|YP_006645832.1| peptidase U62 modulator of DNA gyrase [Pectobacterium carotovorum
subsp. carotovorum PCC21]
gi|402804941|gb|AFR02579.1| peptidase U62 modulator of DNA gyrase [Pectobacterium carotovorum
subsp. carotovorum PCC21]
Length = 481
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 254/480 (52%), Positives = 349/480 (72%), Gaps = 2/480 (0%)
Query: 259 IHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGN 318
IH S L F L+ + L ++ + +VDYAD YFQ + E W LE GIV+
Sbjct: 3 IHASRAPVSPALSAFSLETTEITHALNHIMQRQVDYADLYFQRRQQEGWQLENGIVRPTG 62
Query: 319 FSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKI 377
FS +QGVGVRA+SG+KTAF Y++D+ ++ A + R I+ Q N + + ++ I
Sbjct: 63 FSRDQGVGVRAVSGEKTAFSYTNDLRPQAILQAANTVREISRQGQNASVALPASLPH-GI 121
Query: 378 NSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIV 437
+LY + + ++ K +LL ++K AR +DPRV +V A L+ ++ ILI R+DG +
Sbjct: 122 TALYPSDNPLLAVTEEHKRQLLLAIDKQARARDPRVTQVTAYLNASHETILIARHDGRLA 181
Query: 438 ADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAK 497
D+RPLV L + ++VE+ GRRE G+SG G R +Y +F D + + V+ +V+ AL NL+A
Sbjct: 182 TDVRPLVNLVINVVVEQQGRRENGSSGGGRRLDYRFFADETVSQWVNQAVDQALNNLDAS 241
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
P PAG V+LG G PGILLHEAIGHGLEGDFNRKGSSAFS+ +G+R+A+ IT+VD+GT
Sbjct: 242 PVPAGTYSVILGAGSPGILLHEAIGHGLEGDFNRKGSSAFSSLLGERVAAPGITVVDDGT 301
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
LANRRGS+++DDEG P+QCTTLIE+GIL+GY+QD +NARLMN ++TGNARR S++ +P+P
Sbjct: 302 LANRRGSLHVDDEGTPSQCTTLIEDGILRGYLQDSLNARLMNSALTGNARRASYSALPLP 361
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNTYML G++ EE+I+SVKNGLYA F GGQVDI++GK+VFS ++AY+I+NG++T P
Sbjct: 362 RMTNTYMLAGQYPAEEVIASVKNGLYAVGFGGGQVDISSGKYVFSTTEAYLIENGRVTRP 421
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
VKGATLIGHGP L V+M+GND+ LD G C K+GQ +PV VGQPTL+ID++TVGG+
Sbjct: 422 VKGATLIGHGPEALLHVAMVGNDLALDDGNIACTKEGQSLPVSVGQPTLRIDNMTVGGSQ 481
>gi|365847570|ref|ZP_09388055.1| TldD/PmbA family protein [Yokenella regensburgei ATCC 43003]
gi|364572072|gb|EHM49636.1| TldD/PmbA family protein [Yokenella regensburgei ATCC 43003]
Length = 481
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 261/480 (54%), Positives = 358/480 (74%), Gaps = 7/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEHLLSANGLSHQDLFAILGQLTERRLDYGDLYFQSSYHESWVLEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QGVGVRA+SG+KT F Y+D IS L N+ ++ R+I + NG K+ K + ++ +LY
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQISLTALENSARAARTIV-RDNGDGKV-KTLGAVEHQALY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+R
Sbjct: 121 TSIDPLQSMSREEKLDILRRVDKVARATDKRVQEVSASLSGVYELILVAATDGTLAADVR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L V+++VE G+RE G SG GGR+ Y+YF ++ + +V AL+NL A
Sbjct: 181 PLVRLSVSVLVEDEGKRERGASGGGGRFGYDYFLADEDGEVRADAWAREAVRMALVNLSA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
+ APAG VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+G
Sbjct: 241 EAAPAGTFPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGQLVASELCTVVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+++RRGS++IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P+
Sbjct: 301 TMSDRRGSVSIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML GK P+EII SV G++A NF GGQVDIT+GKFVFS S+AY+I+ GK+T
Sbjct: 361 PRMTNTYMLAGKSTPQEIIESVDYGIFAPNFGGGQVDITSGKFVFSTSEAYLIEKGKVTR 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK+D++TVGGT
Sbjct: 421 PVKGATLIGSGIEAMQQISMVGNDLMLDKGVGVCGKEGQSLPVGVGQPTLKVDNLTVGGT 480
>gi|268590759|ref|ZP_06124980.1| TldD protein [Providencia rettgeri DSM 1131]
gi|291313534|gb|EFE53987.1| TldD protein [Providencia rettgeri DSM 1131]
Length = 481
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 269/474 (56%), Positives = 359/474 (75%), Gaps = 9/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL L ++ L ILG + + +DYAD +FQ + +E+W+LE+ I+K G+++I+QGVGVR
Sbjct: 10 LLAANRLGQENLYDILGLLSERHLDYADLFFQSSFHESWVLEDRIIKDGSYNIDQGVGVR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIAN-QSNGKIKIIKNIKKIKINSLYSFTDTI 387
A+SG+KT F Y+D IS + L + + RSI N Q +GK +I+ N++ K LYS D +
Sbjct: 70 AVSGEKTGFAYADQISLHALTQSATAARSIVNEQGSGKSQILTNVEYKK---LYSAADPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S++ +KI LL RV+++AR +DPRVI+V A+L+G Y+ +L+ DG + AD+RPLV+L
Sbjct: 127 QSLSREQKIDLLHRVDQVARAEDPRVIEVNASLTGVYEQVLVAATDGTLAADVRPLVRLS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYFTDM-----ILEKCVSNSVNSALINLEAKPAPAG 502
V+++VE +G+RE G SG GGRY Y YF ++ + E+ +V AL+NL A APAG
Sbjct: 187 VSVLVEHDGKRERGASGGGGRYGYEYFLEIHQGQVVAEQYAREAVRMALVNLSAIAAPAG 246
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
+M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG+++AS T+VD+GT+A RR
Sbjct: 247 MMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQIGEQVASPLCTVVDDGTIAGRR 306
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+ IDDEG P Q LIENGIL+ Y+QD +NARLM ++ TGNARRES+AH+P+PRMTNT
Sbjct: 307 GSLAIDDEGVPGQYNVLIENGILRNYIQDKLNARLMGVAPTGNARRESYAHLPMPRMTNT 366
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML G PEEII+SV G+YA NF GGQVDIT+GKFVFS S+AY+I+ GKIT PVKGAT
Sbjct: 367 YMLAGASTPEEIIASVDKGIYAPNFGGGQVDITSGKFVFSTSEAYLIEKGKITSPVKGAT 426
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
LIG G ++++SM+GND+ LD GVGVCGK+GQ VPVGVGQPTLK+D +TVGGT
Sbjct: 427 LIGSGVEAMQQISMVGNDLALDKGVGVCGKEGQSVPVGVGQPTLKLDKLTVGGT 480
>gi|418361341|ref|ZP_12961996.1| TldD protein, suppresses the inhibitory activity of the carbon
storage regulator (csrA) [Aeromonas salmonicida subsp.
salmonicida 01-B526]
gi|356687371|gb|EHI51953.1| TldD protein, suppresses the inhibitory activity of the carbon
storage regulator (csrA) [Aeromonas salmonicida subsp.
salmonicida 01-B526]
Length = 482
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 273/481 (56%), Positives = 360/481 (74%), Gaps = 7/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L+ + LL P DLDE L ++LG++ ++V++ D YFQ + +E+W+LE+GIVK G+++I
Sbjct: 4 LSQVSASLLAPNDLDEGRLQQLLGSLMSHQVEFGDLYFQRSWHESWMLEDGIVKDGSYNI 63
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QGVGVRA+SG+KT F YSD++S L +V T + + G +K + + N LY
Sbjct: 64 DQGVGVRAVSGEKTGFAYSDELSLLALQQSV--TAARGIAAAGAQGNVKAWARTEANLLY 121
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
D + +++ +KI LLE+++K AR DP + +V+A++SG Y+ IL+ DG + ADIR
Sbjct: 122 PAMDPLQTLDKHQKIALLEQMDKFARSLDPVINQVMASISGVYEEILVAATDGTLAADIR 181
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-LEK----CVSNSVNSALINLEA 496
PLV+L VT+I EK RRE G++G GGR Y+YF ++ LE V +V AL+NLEA
Sbjct: 182 PLVRLSVTVIAEKGERRERGSAGGGGRCGYDYFLELDGLESRAFGYVREAVRQALVNLEA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSSAF+ IG+++ASK TIVD+G
Sbjct: 242 IDAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRKGSSAFAGRIGEQVASKHCTIVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL RRGS++IDDEG P LIENGILKGY+QD NARLM + +TGN RRES+A +P+
Sbjct: 302 TLPGRRGSVSIDDEGTPGGYNVLIENGILKGYLQDKQNARLMGVPLTGNGRRESYAAMPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G++ P EII+SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I++GKIT
Sbjct: 362 PRMTNTYMLAGQYDPAEIIASVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIEDGKITT 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG+GP + VSM+G+D+ LD GVGVCGK+GQ VPVGVGQPTLK+D +TVGGT
Sbjct: 422 PIKGATLIGNGPEAMSLVSMVGSDLALDRGVGVCGKEGQSVPVGVGQPTLKLDQLTVGGT 481
Query: 737 N 737
Sbjct: 482 Q 482
>gi|331649036|ref|ZP_08350124.1| TldD protein [Escherichia coli M605]
gi|386620850|ref|YP_006140430.1| Putative protease [Escherichia coli NA114]
gi|387831121|ref|YP_003351058.1| putative modulator of DNA gyrase [Escherichia coli SE15]
gi|417663815|ref|ZP_12313395.1| TldD protein, part of proposed TldE/TldD proteolytic complex
[Escherichia coli AA86]
gi|432423650|ref|ZP_19666189.1| protein tldD [Escherichia coli KTE178]
gi|432501799|ref|ZP_19743551.1| protein tldD [Escherichia coli KTE216]
gi|432560512|ref|ZP_19797168.1| protein tldD [Escherichia coli KTE49]
gi|432696109|ref|ZP_19931302.1| protein tldD [Escherichia coli KTE162]
gi|432707586|ref|ZP_19942663.1| protein tldD [Escherichia coli KTE6]
gi|432922257|ref|ZP_20125221.1| protein tldD [Escherichia coli KTE173]
gi|432929056|ref|ZP_20130157.1| protein tldD [Escherichia coli KTE175]
gi|432982688|ref|ZP_20171459.1| protein tldD [Escherichia coli KTE211]
gi|433098044|ref|ZP_20284220.1| protein tldD [Escherichia coli KTE139]
gi|433107492|ref|ZP_20293457.1| protein tldD [Escherichia coli KTE148]
gi|281180278|dbj|BAI56608.1| putative modulator of DNA gyrase [Escherichia coli SE15]
gi|330909288|gb|EGH37802.1| TldD protein, part of proposed TldE/TldD proteolytic complex
[Escherichia coli AA86]
gi|331042783|gb|EGI14925.1| TldD protein [Escherichia coli M605]
gi|333971351|gb|AEG38156.1| Putative protease [Escherichia coli NA114]
gi|430942959|gb|ELC63090.1| protein tldD [Escherichia coli KTE178]
gi|431026716|gb|ELD39787.1| protein tldD [Escherichia coli KTE216]
gi|431089224|gb|ELD95048.1| protein tldD [Escherichia coli KTE49]
gi|431232184|gb|ELF27860.1| protein tldD [Escherichia coli KTE162]
gi|431256014|gb|ELF49092.1| protein tldD [Escherichia coli KTE6]
gi|431437280|gb|ELH18793.1| protein tldD [Escherichia coli KTE173]
gi|431442179|gb|ELH23286.1| protein tldD [Escherichia coli KTE175]
gi|431489935|gb|ELH69560.1| protein tldD [Escherichia coli KTE211]
gi|431613633|gb|ELI82829.1| protein tldD [Escherichia coli KTE139]
gi|431625090|gb|ELI93684.1| protein tldD [Escherichia coli KTE148]
Length = 481
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 263/481 (54%), Positives = 359/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRAISG+KT F Y+D IS L + ++ R+I S +GK++ + ++ + L
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRDSGDGKVQTLGAVEH---SPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE++G+RE G SG GGR+ Y +F ++ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM M+ TGN RRES+AH+P
Sbjct: 300 GTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK++++TVGG
Sbjct: 420 KPVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVNNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|432767611|ref|ZP_20002005.1| protein tldD [Escherichia coli KTE50]
gi|432963697|ref|ZP_20153116.1| protein tldD [Escherichia coli KTE202]
gi|433064693|ref|ZP_20251604.1| protein tldD [Escherichia coli KTE125]
gi|431322775|gb|ELG10360.1| protein tldD [Escherichia coli KTE50]
gi|431472272|gb|ELH52164.1| protein tldD [Escherichia coli KTE202]
gi|431579393|gb|ELI51977.1| protein tldD [Escherichia coli KTE125]
Length = 481
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 263/481 (54%), Positives = 358/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRAISG+K F Y+D IS L + ++ R+I S +GK++ + ++ + L
Sbjct: 63 DQGVGVRAISGEKNGFAYADQISLLALEQSAQAARTIVRDSGDGKVQTLGAVEH---SPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE++G+RE G SG GGR+ Y +F ++ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM M+ TGN RRES+AH+P
Sbjct: 300 GTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KPVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|238898799|ref|YP_002924481.1| protease TldD [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
gi|229466559|gb|ACQ68333.1| putative enzyme for maturation of Microcin B17 and degradation of
CcdA with winged helix domain [Candidatus Hamiltonella
defensa 5AT (Acyrthosiphon pisum)]
Length = 481
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 265/481 (55%), Positives = 344/481 (71%), Gaps = 7/481 (1%)
Query: 261 PLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFS 320
PLN LL L+ + L ++LG + + K+ YAD YFQ +E WI+E+ IVK G +
Sbjct: 2 PLNFVSEQLLAANKLNYQHLYQVLGQLSERKLSYADLYFQSNYHEAWIIEDSIVKEGIYH 61
Query: 321 INQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSL 380
I+QGVGVRA+SG+KT F Y+D I+ NTL + S R+I NQ + + + KK L
Sbjct: 62 IDQGVGVRAVSGEKTGFAYADQITLNTLQKSACSARNIENQPHQVTSV--SFKKYPHPIL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y D + S+ EKI +L +V+K+AR V +V A+LSG Y++IL+ D + ADI
Sbjct: 120 YPPLDPLQSLPQEEKIAILHQVDKVARAAYKGVQQVTASLSGTYELILVAATDETLAADI 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V ++VE G+RE GNSG G R+ Y+YF ++ E +V AL+NL
Sbjct: 180 RPLVRLSVNVLVESEGKREQGNSGGGARFGYDYFLGIENGEIRAEAFAKEAVRIALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A PAPAG M VVLG GWPG+LLHEA+GHGLE DFNR+G+SAFS IG+ +AS+ T+VD+
Sbjct: 240 ALPAPAGSMPVVLGHGWPGVLLHEAVGHGLEADFNRRGTSAFSGKIGQMVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTL RRGS+ IDDEG P Q LIENG+LK YMQD +NARLM ++ TGN RR+S+AH+P
Sbjct: 300 GTLNARRGSLAIDDEGVPGQYNVLIENGVLKNYMQDKLNARLMGVAPTGNGRRQSYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML+GK PEEII SV+ GLYA NF GGQVDIT+G FVFS S+AY+I+NG IT
Sbjct: 360 MPRMTNTYMLSGKSTPEEIIGSVEYGLYAPNFGGGQVDITSGDFVFSTSEAYLIENGSIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
+ VKGATLIG G ++++SM+GND+ LD GVGVCGK+GQ V VGVGQPTLK++++TVGG
Sbjct: 420 HAVKGATLIGSGIEAMQQISMVGNDLTLDKGVGVCGKNGQSVAVGVGQPTLKLEALTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|238782976|ref|ZP_04627004.1| Protein tldD [Yersinia bercovieri ATCC 43970]
gi|238716179|gb|EEQ08163.1| Protein tldD [Yersinia bercovieri ATCC 43970]
Length = 481
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 265/481 (55%), Positives = 354/481 (73%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L+ LL L+ + L +LG + + ++DYAD YFQ + +E W+LE+ I+K G+++I
Sbjct: 3 LSFVSEQLLAANKLNHQDLFSVLGQLAERRLDYADLYFQSSYHEAWVLEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D I+ N L + + RSI NGK+ + ++ +L
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQITLNALQQSAHAARSIVRDIGNGKVH---TLGEVPYQAL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y D + S++ +KI LL RV+K+AR D RV +V A+L+G Y+ +L+ DG + AD+
Sbjct: 120 YPLLDPLQSLSREDKIALLHRVDKVARAADKRVQEVSASLTGIYEQVLVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLE 495
RPLV+L V+++VE+NG+RE G SG GGR+ Y+YF + + + + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEENGKRERGASGGGGRFGYDYFLETVDGEVRADNFANEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+GSS FS +GK +AS+ T+VD+
Sbjct: 240 AIAAPAGAMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGSSVFSGQMGKLVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTMQGRRGSLAIDDEGVPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK PEEII+SV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+ GKIT
Sbjct: 360 MPRMTNTYMLAGKSTPEEIIASVEYGLYAPNFGGGQVDITSGKFVFSTSEAYLIEKGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
VKGATLIG G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 RAVKGATLIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|82545526|ref|YP_409473.1| protease TldD [Shigella boydii Sb227]
gi|416302250|ref|ZP_11653286.1| protease TldD [Shigella flexneri CDC 796-83]
gi|420327400|ref|ZP_14829145.1| modulator of DNA gyrase family protein [Shigella flexneri CCH060]
gi|420354639|ref|ZP_14855720.1| modulator of DNA gyrase family protein [Shigella boydii 4444-74]
gi|421684404|ref|ZP_16124191.1| modulator of DNA gyrase family protein [Shigella flexneri 1485-80]
gi|81246937|gb|ABB67645.1| suppresses inhibitory activity of CsrA [Shigella boydii Sb227]
gi|320184035|gb|EFW58857.1| protease TldD [Shigella flexneri CDC 796-83]
gi|391248162|gb|EIQ07406.1| modulator of DNA gyrase family protein [Shigella flexneri CCH060]
gi|391274908|gb|EIQ33707.1| modulator of DNA gyrase family protein [Shigella boydii 4444-74]
gi|404336623|gb|EJZ63083.1| modulator of DNA gyrase family protein [Shigella flexneri 1485-80]
Length = 481
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 263/481 (54%), Positives = 358/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRAISG+KT F Y+D IS L + ++ R+I S +GK++ + + + L
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRDSGDGKVQTLGAVGH---SPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE++G+RE G SG GGR+ Y +F ++ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM M+ TGN RRES+AH+P
Sbjct: 300 GTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PV+GATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KPVRGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|82778552|ref|YP_404901.1| protease TldD [Shigella dysenteriae Sd197]
gi|309785570|ref|ZP_07680201.1| modulator of DNA gyrase family protein [Shigella dysenteriae 1617]
gi|81242700|gb|ABB63410.1| CsrA inhibitory activity suppressor [Shigella dysenteriae Sd197]
gi|308926690|gb|EFP72166.1| modulator of DNA gyrase family protein [Shigella dysenteriae 1617]
Length = 481
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 263/481 (54%), Positives = 359/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRAISG+KT F Y+D IS L + ++ R+I S +GK++ + ++ + L
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRDSGDGKVQTLGAVEH---SPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE++G+RE G SG GGR+ Y +F ++ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGVTPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KPVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|420382155|ref|ZP_14881594.1| modulator of DNA gyrase family protein [Shigella dysenteriae
225-75]
gi|391298981|gb|EIQ56963.1| modulator of DNA gyrase family protein [Shigella dysenteriae
225-75]
Length = 481
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 263/481 (54%), Positives = 358/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRAISG+KT F Y+D IS L + ++ R+I S +GK++ + + + L
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRDSGDGKVQTLGAVGH---SPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE++G+RE G SG GGR+ Y +F ++ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLDGEVRADTWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM M+ TGN RRES+AH+P
Sbjct: 300 GTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PV+GATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KPVRGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|344345345|ref|ZP_08776198.1| peptidase U62 modulator of DNA gyrase [Marichromatium purpuratum
984]
gi|343803066|gb|EGV20979.1| peptidase U62 modulator of DNA gyrase [Marichromatium purpuratum
984]
Length = 480
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 266/479 (55%), Positives = 355/479 (74%), Gaps = 7/479 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L +AR +L P L + L ++LG + VD AD YFQ ++ ++W+LE+GI+K GNF+I
Sbjct: 5 LALARDSILAPVGLCDGDLDRLLGLLAGASVDAADIYFQSSRLQSWVLEDGIIKDGNFNI 64
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QG G+R I G+KT F YSD++ L A ++ R+IA G+ + + + +LY
Sbjct: 65 EQGAGLRVICGEKTGFAYSDELQFPALAQAAEAARAIAR--GGQSRSVAVGTGVAARTLY 122
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ I ++ +KI LL +V+ AR DPRV +VIA+L +DV+L+ +DG + AD+R
Sbjct: 123 PPINPIDTLADADKIALLRQVDAEARAADPRVREVIASLVAVHDVVLVLADDGSLAADVR 182
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVS---NSVNSALINLEAKP 498
PLV++ V++IVE +G+RE G+SG G R + +F + E+ + +V AL +LEA+
Sbjct: 183 PLVRMNVSVIVEADGQREQGSSGGGARTDLGFF--LAEERALGFAREAVRLALTSLEAEE 240
Query: 499 APAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL 558
APAG M VVLGPGWPG+LLHEA+GHGLEGDFNRKG+SAF+ +G+R+A+ +T+VDNGTL
Sbjct: 241 APAGTMPVVLGPGWPGVLLHEAVGHGLEGDFNRKGTSAFAGRLGERVAAPGVTVVDNGTL 300
Query: 559 ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPR 618
RRGS+ IDDEG PTQ T LIE+GIL+GYMQD +NARLM ++ TGN RRES+AH+P+PR
Sbjct: 301 PGRRGSLAIDDEGTPTQDTVLIEDGILRGYMQDKLNARLMGVAPTGNGRRESYAHLPMPR 360
Query: 619 MTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPV 678
MTNTYML G P EII+SV GLYA NF GGQVDIT+GKFVFSAS+AY+I+NG+I PV
Sbjct: 361 MTNTYMLAGDRDPAEIIASVDKGLYAANFGGGQVDITSGKFVFSASEAYLIENGRIGRPV 420
Query: 679 KGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
KGATLIG+GP ++ +VSMIGND+KLD GVG CGKDGQ VPVGVGQPTL+ID++TVGGT+
Sbjct: 421 KGATLIGNGPEVMTRVSMIGNDLKLDEGVGTCGKDGQSVPVGVGQPTLRIDALTVGGTS 479
>gi|421497155|ref|ZP_15944340.1| peptidase U62 modulator of DNA gyrase [Aeromonas media WS]
gi|407183845|gb|EKE57717.1| peptidase U62 modulator of DNA gyrase [Aeromonas media WS]
Length = 472
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 268/474 (56%), Positives = 360/474 (75%), Gaps = 7/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
+L P DLDE L ++LG++ ++V++ D YFQ + +E+W+LE+GIVK G+++I+QGVGVR
Sbjct: 1 MLAPNDLDEGRLQQLLGSLMSHQVEFGDLYFQRSWHESWMLEDGIVKDGSYNIDQGVGVR 60
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+SG+KT F YSD++S L +V T + + G +K + + N LY D +
Sbjct: 61 AVSGEKTGFAYSDELSLLALQQSV--TAARGIAAAGAQGKVKAWARTEANLLYPAMDPLQ 118
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
+++ ++KI LLE+++K AR DP + +V+A++SG Y+ IL+ DG + AD+RPLV+L V
Sbjct: 119 TLDKQQKIALLEQMDKFARSLDPAINQVMASISGVYEEILVAATDGTLAADVRPLVRLSV 178
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMI-LEK----CVSNSVNSALINLEAKPAPAGI 503
T+I EK RRE G++G GGR+ Y+YF ++ LE V +V AL+NLEA APAG
Sbjct: 179 TVIAEKGDRRERGSAGGGGRFGYDYFLELDGLENRAFGYVREAVRQALVNLEAIDAPAGT 238
Query: 504 MKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRG 563
M VVLG GWPG+LLHEA+GHGLEGDFNRKGSSAF+ IG+++AS+ TIVD+GTL RRG
Sbjct: 239 MPVVLGAGWPGVLLHEAVGHGLEGDFNRKGSSAFAGRIGEQVASRHCTIVDDGTLVGRRG 298
Query: 564 SINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTY 623
S++IDDEG P LIENGILKGY+QD NARLM + +TGN RRES+A +P+PRMTNTY
Sbjct: 299 SVSIDDEGTPGGYNVLIENGILKGYLQDKQNARLMGVPLTGNGRRESYAALPMPRMTNTY 358
Query: 624 MLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATL 683
ML G+ P EII+SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I++G+IT P+KGATL
Sbjct: 359 MLAGQHDPAEIIASVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIEDGRITAPIKGATL 418
Query: 684 IGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
IG+GP + +VSM+G+D+ LD GVGVCGK+GQ VPVGVGQPTLK+D +TVGGT+
Sbjct: 419 IGNGPEAMSQVSMVGSDLALDRGVGVCGKEGQSVPVGVGQPTLKLDQLTVGGTS 472
>gi|420367590|ref|ZP_14868371.1| modulator of DNA gyrase family protein [Shigella flexneri 1235-66]
gi|391323145|gb|EIQ79812.1| modulator of DNA gyrase family protein [Shigella flexneri 1235-66]
Length = 481
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 264/480 (55%), Positives = 359/480 (74%), Gaps = 7/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QGVGVRAISG+KT F Y+D IS L + + R+I + NG K+ K + ++ +LY
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAHAARTIV-RDNGDGKV-KTLGAVEHQALY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ D + S++ EK+ +L RV+ +AR D RV +V A+L+G Y++IL+ DG + AD+R
Sbjct: 121 TSVDPLQSMSREEKLDILRRVDNVARAADKRVQEVTASLTGVYELILVAATDGTLAADVR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L V++ VE++G+RE G SG GGR+ Y+YF ++ + +V AL+NL A
Sbjct: 181 PLVRLSVSVQVEEDGKRERGASGGGGRFGYDYFLADLDGEVRADAWAKEAVRMALVNLSA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ TIVD+G
Sbjct: 241 VAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGHMGELVASELCTIVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+A+RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P+
Sbjct: 301 TMADRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML+GK P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 361 PRMTNTYMLSGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTK 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGGT
Sbjct: 421 PVKGATLIGSGIEAMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGGT 480
>gi|416281454|ref|ZP_11645850.1| protease TldD [Shigella boydii ATCC 9905]
gi|320181514|gb|EFW56432.1| protease TldD [Shigella boydii ATCC 9905]
Length = 481
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 263/481 (54%), Positives = 358/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRAISG+KT F Y+D IS L + ++ R+I S +GK++ + ++ + L
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRDSGDGKVQTLGAVEH---SPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE++G+RE G SG GGR+ Y +F ++ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM M+ TGN RRES+AH+P
Sbjct: 300 GTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++ M+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KPVKGATLIGSGIETMQQILMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|404378859|ref|ZP_10983936.1| hypothetical protein HMPREF9021_01226 [Simonsiella muelleri ATCC
29453]
gi|294483312|gb|EFG30998.1| hypothetical protein HMPREF9021_01226 [Simonsiella muelleri ATCC
29453]
Length = 480
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 254/470 (54%), Positives = 351/470 (74%), Gaps = 3/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL+ + + + + L + ++ VDYAD Y Q T E+W L+EGIVK+G+F I+QGVGVR
Sbjct: 12 LLQANQIGAEEIAQSLAIIGRHYVDYADIYCQRTAYESWHLDEGIVKSGSFQIDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+SG+KTAF Y+D ++ + + A ++ + I ++G I+ + +++ + I
Sbjct: 72 AVSGEKTAFAYADSLTTDAIQRAAETVKVIG--ASGNTVPIRVPTPVFGKAIHGAFNPIV 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ K+ LL++VE++AR D RV++V+A L+ EYD++ I R DG ADIRPL++L +
Sbjct: 130 GLDSAAKVALLQKVEQLARAADSRVVQVMAGLTCEYDMVYIARLDGKHAADIRPLIRLSL 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVL 508
T+IV++ RRE G+SG GGR + YF D +E+ VS +V A+INLEA+PAPAG+M VVL
Sbjct: 190 TVIVKQGNRREQGSSGGGGRLDLRYFDDAKIEQYVSQAVKQAVINLEARPAPAGVMPVVL 249
Query: 509 GPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINID 568
G GWPG+LLHEA+GHGLEGDFNRK +S F+ IG+++A+K +T++D G + +RRGS+NID
Sbjct: 250 GNGWPGVLLHEAVGHGLEGDFNRKQTSVFTGKIGEQVAAKGVTVIDQGNIPDRRGSLNID 309
Query: 569 DEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGK 628
DEGNPT T LIE+GIL GYMQD NARLM M +TGN RRES++ + +PRMTNT+M NG
Sbjct: 310 DEGNPTSRTVLIEDGILMGYMQDETNARLMGMDVTGNGRRESYSSVTMPRMTNTFMENGI 369
Query: 629 FHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGP 688
+ +EII+S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++NG++ YPVKGAT+IG G
Sbjct: 370 YERDEIIASLDKGIYAVNFGGGQVDITSGKFVFSASEAWWVENGQLQYPVKGATIIGSGT 429
Query: 689 NILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS-ITVGGTN 737
+LK VSMIGND LD GVGVCGKDGQ VPVGVGQPTL+ID+ +TVGG+
Sbjct: 430 EVLKHVSMIGNDSALDSGVGVCGKDGQSVPVGVGQPTLRIDAGLTVGGSE 479
>gi|237730160|ref|ZP_04560641.1| protease TldD [Citrobacter sp. 30_2]
gi|395228031|ref|ZP_10406356.1| TldD protein [Citrobacter sp. A1]
gi|421846382|ref|ZP_16279530.1| protease TldD [Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|424732856|ref|ZP_18161428.1| protein tldd [Citrobacter sp. L17]
gi|226908766|gb|EEH94684.1| protease TldD [Citrobacter sp. 30_2]
gi|394718527|gb|EJF24157.1| TldD protein [Citrobacter sp. A1]
gi|411772259|gb|EKS55885.1| protease TldD [Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|422892672|gb|EKU32525.1| protein tldd [Citrobacter sp. L17]
gi|455644611|gb|EMF23704.1| protease TldD [Citrobacter freundii GTC 09479]
Length = 481
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 263/481 (54%), Positives = 358/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRAISG+KT F Y+D IS L + + R+I S +GK+K + ++ +L
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAHAARTIVRDSGDGKVKTLGAVEH---QAL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+ +AR D RV +V A+L+G Y++IL+ DG + AD+
Sbjct: 120 YTSVDPLQSMSREEKLDILRRVDSVARAADKRVQEVTASLTGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V++ VE++G+RE G SG GGR+ Y+YF ++ + +V AL+NL
Sbjct: 180 RPLVRLSVSVQVEEDGKRERGASGGGGRFGYDYFLGDLDGEVRADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGHMGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+A+RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTMADRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KPVKGATLIGSGIEAMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|170765619|ref|ZP_02900430.1| protein TldD [Escherichia albertii TW07627]
gi|170124765|gb|EDS93696.1| protein TldD [Escherichia albertii TW07627]
Length = 481
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 263/481 (54%), Positives = 359/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLTANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRAISG+KT F Y+D I+ L + ++ R+I S +GK++ + ++ + L
Sbjct: 63 DQGVGVRAISGEKTGFAYADQINLLALEQSAQAARTIVRDSGDGKVQTLGAVEH---SPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTSLDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE++G+RE G SG GGR+ Y +F ++ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM M+ TGN RRES+AH+P
Sbjct: 300 GTIVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KPVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|238758349|ref|ZP_04619527.1| Protein tldD [Yersinia aldovae ATCC 35236]
gi|238703472|gb|EEP96011.1| Protein tldD [Yersinia aldovae ATCC 35236]
Length = 481
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 265/481 (55%), Positives = 354/481 (73%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L+ LL L+ + L +LG + + ++DYAD YFQ + +E W+LE+ I+K G+++I
Sbjct: 3 LSFVSEQLLAANKLNHQDLFSVLGQLAERRLDYADLYFQSSFHEAWVLEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D I+ N L + + RSI + NG++ + +I +L
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQITLNALQQSAHAARSIVRDTGNGQVH---TLGEIGYQAL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y D + S++ +KI LL RV+K+AR D RV +V A+L+G Y+ IL+ DG + AD+
Sbjct: 120 YPLLDPLQSLSREDKIALLHRVDKVARAADKRVQEVSASLTGVYEQILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLE 495
RPLV+L V+++VE NG+RE G SG GGR+ Y+YF + + + + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEDNGKRERGASGGGGRFGYDYFLETVDGEVRADNFANEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+GSS FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGAMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGSSVFSGQMGQLVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTMQGRRGSLAIDDEGVPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK PEEII+SV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+ GKIT
Sbjct: 360 MPRMTNTYMLAGKSTPEEIIASVEYGLYAPNFGGGQVDITSGKFVFSTSEAYLIEKGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
VKGATLIG G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 RAVKGATLIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|387127163|ref|YP_006295768.1| TldD-like protein [Methylophaga sp. JAM1]
gi|386274225|gb|AFI84123.1| TldD-like protein [Methylophaga sp. JAM1]
Length = 480
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 250/469 (53%), Positives = 341/469 (72%), Gaps = 3/469 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
+L P +L + + + L + + +D+AD YFQ ++ ENW++++GI+K G + + QGVGVR
Sbjct: 13 ILVPAELQSQDIERALSSAMRPGIDFADLYFQRSRGENWLMDDGIIKDGGYHLEQGVGVR 72
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YSDD++ +L+ A + ++ +G+ + K + LYS D I
Sbjct: 73 ACSGEKTGFAYSDDLNLKSLLEATNAASALVK--HGQQNKVNARKYMHAAPLYSDHDPIL 130
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ + K+ LL + AR DPRV +V +L+G + ILI +DG ADIRPL+++ V
Sbjct: 131 GMDTQTKLNLLREADAYARAADPRVTQVTVSLAGSLEHILIAASDGTYAADIRPLIRMNV 190
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMILE-KCVSNSVNSALINLEAKPAPAGIMKVV 507
++IVE GRRE G++G G R +Y YF D L +V AL+NL+A APAG M VV
Sbjct: 191 SVIVESKGRRERGSAGGGRRLDYQYFIDNDLAVGFAKEAVRQALVNLDAVDAPAGSMPVV 250
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
L GWPG+LLHEA+GHGLEGDFNR+ +SAFS +G+++AS T+VD+GTL +RRGS+ I
Sbjct: 251 LASGWPGVLLHEAVGHGLEGDFNRRDTSAFSGKMGEQVASPLCTVVDDGTLTDRRGSLTI 310
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PT+ TTLIENG L GYMQD +NARLM TGN RRES+AH+P+PRMTNTYML G
Sbjct: 311 DDEGTPTEFTTLIENGRLTGYMQDKLNARLMGTRSTGNGRRESYAHLPMPRMTNTYMLAG 370
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ EEII+SV+ G+YA NF GGQVDIT+GKFVFS+S+AY+I+NGK+T PVKGATLIG+G
Sbjct: 371 QHKAEEIIASVEKGIYAVNFGGGQVDITSGKFVFSSSEAYLIENGKVTRPVKGATLIGNG 430
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P ++ ++SM+ +D++LD G+G CGK+GQ VPVGVGQPTLKID++TVGGT
Sbjct: 431 PEVMNRISMVADDLELDSGIGNCGKEGQSVPVGVGQPTLKIDALTVGGT 479
>gi|29654758|ref|NP_820450.1| protease TldD [Coxiella burnetii RSA 493]
gi|161830119|ref|YP_001597308.1| TldD protein [Coxiella burnetii RSA 331]
gi|29542026|gb|AAO90964.1| microcin-processing peptidase 2 (TldD) [Coxiella burnetii RSA 493]
gi|161761986|gb|ABX77628.1| TldD protein [Coxiella burnetii RSA 331]
Length = 477
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 264/476 (55%), Positives = 348/476 (73%), Gaps = 3/476 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+ A LL PF+L+ +L KI+G VD AD + Q + E+W LE+GIVK GNFSI
Sbjct: 5 IQTASDSLLRPFNLNANVLEKIIGRAMGRSVDGADIFLQSIQEESWFLEDGIVKEGNFSI 64
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+ G G+R +SG++T F ++DDI+ L+ A S +SIA +G+ I + K + LY
Sbjct: 65 DHGFGLRVLSGEETGFAFADDINAKALLQAAHSAKSIAYSQSGQA--INVLHKTLVRPLY 122
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
++ I+S+ + LL RV+ AR KDPRV +VI +L+G+++V+LI +DGL+ AD+R
Sbjct: 123 LPSNPINSMPAASIVDLLRRVDDYARAKDPRVKQVIVSLTGQHEVVLILNSDGLMAADLR 182
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPA 501
PLV + V +IVE+NG+R G++G G R Y FT + +V+ A +NL+A APA
Sbjct: 183 PLVSMRVRVIVEENGQRAQGSAGGGARGGYETFTSAAFQYA-DKAVHQACLNLKADNAPA 241
Query: 502 GIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANR 561
G +VLGPGWP ILLHEAIGHGLEGDFNRKGSSAFS +G+R+AS T+VD+GT+ R
Sbjct: 242 GTFPIVLGPGWPAILLHEAIGHGLEGDFNRKGSSAFSGRLGERVASSLCTVVDDGTVPGR 301
Query: 562 RGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTN 621
RGS++IDDEG TQ T LIE GILK YMQD NA LM MS TGN RRES+AH+P+PRMTN
Sbjct: 302 RGSLSIDDEGTMTQKTVLIEKGILKNYMQDRHNAHLMKMSPTGNGRRESYAHLPLPRMTN 361
Query: 622 TYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGA 681
TY+L G+ P+EII+SV+ GLYA +FSGGQVDIT+GKFVFS S+AY+I+ GK+T PVKGA
Sbjct: 362 TYLLPGESDPQEIIASVERGLYAVDFSGGQVDITSGKFVFSTSEAYLIEKGKVTRPVKGA 421
Query: 682 TLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
TLIG+GP++L KVSM+GND+ LD G+G CGK GQ VPVGVGQPT+K+D++TVGG +
Sbjct: 422 TLIGNGPDVLTKVSMVGNDLALDSGIGTCGKAGQSVPVGVGQPTIKVDALTVGGVD 477
>gi|168262611|ref|ZP_02684584.1| protein TldD [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|168463398|ref|ZP_02697315.1| protein TldD [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|194445200|ref|YP_002042623.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|197250809|ref|YP_002148292.1| protease TldD [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|205354269|ref|YP_002228070.1| protease TldD [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|207858616|ref|YP_002245267.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|375125142|ref|ZP_09770306.1| protein TldD [Salmonella enterica subsp. enterica serovar
Gallinarum str. SG9]
gi|417536421|ref|ZP_12189577.1| TldD protein [Salmonella enterica subsp. enterica serovar
Wandsworth str. A4-580]
gi|418760066|ref|ZP_13316233.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35185]
gi|418767306|ref|ZP_13323371.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35199]
gi|418772886|ref|ZP_13328887.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21539]
gi|418775670|ref|ZP_13331625.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 33953]
gi|418780200|ref|ZP_13336090.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35188]
gi|418786004|ref|ZP_13341827.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21559]
gi|418803687|ref|ZP_13359304.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35202]
gi|418806574|ref|ZP_13362146.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21550]
gi|418810735|ref|ZP_13366275.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22513]
gi|418818349|ref|ZP_13373828.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21538]
gi|418823417|ref|ZP_13378826.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22425]
gi|418824591|ref|ZP_13379942.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22462]
gi|418831312|ref|ZP_13386270.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM N18486]
gi|418837403|ref|ZP_13392277.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM N1543]
gi|418842216|ref|ZP_13397026.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21554]
gi|418851375|ref|ZP_13406087.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 37978]
gi|418853233|ref|ZP_13407927.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19593]
gi|419787556|ref|ZP_14313267.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. Levine 1]
gi|419795557|ref|ZP_14321154.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. Levine 15]
gi|421356533|ref|ZP_15806854.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|421364866|ref|ZP_15815094.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|421365611|ref|ZP_15815824.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|421374492|ref|ZP_15824623.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|421378573|ref|ZP_15828652.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|421379740|ref|ZP_15829807.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|421384595|ref|ZP_15834618.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|421389763|ref|ZP_15839746.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|421397049|ref|ZP_15846974.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|421399061|ref|ZP_15848960.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|421405685|ref|ZP_15855510.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|421408790|ref|ZP_15858589.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|421414529|ref|ZP_15864270.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|421419195|ref|ZP_15868889.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|421421283|ref|ZP_15870952.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|421427513|ref|ZP_15877133.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|421431284|ref|ZP_15880870.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|421435178|ref|ZP_15884718.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|421438251|ref|ZP_15887753.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|421442915|ref|ZP_15892360.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|421884540|ref|ZP_16315752.1| protease TldD [Salmonella enterica subsp. enterica serovar
Senftenberg str. SS209]
gi|436642785|ref|ZP_20516479.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22704]
gi|436651711|ref|ZP_20516766.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE30663]
gi|436804484|ref|ZP_20526134.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|436805621|ref|ZP_20526237.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|436812711|ref|ZP_20531071.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|436846605|ref|ZP_20539387.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|436848200|ref|ZP_20540017.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|436860798|ref|ZP_20547982.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|436861768|ref|ZP_20548729.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|436869670|ref|ZP_20553811.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|436876794|ref|ZP_20558099.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|436884604|ref|ZP_20562242.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|436896903|ref|ZP_20569614.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|436902662|ref|ZP_20573126.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|436914166|ref|ZP_20579331.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|436915670|ref|ZP_20580103.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|436922578|ref|ZP_20584644.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|436931944|ref|ZP_20589293.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|436939412|ref|ZP_20593726.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|436948161|ref|ZP_20598463.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|436956988|ref|ZP_20602770.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|436974185|ref|ZP_20610997.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|436985010|ref|ZP_20614712.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|436993833|ref|ZP_20618626.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|437000624|ref|ZP_20620718.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|437024561|ref|ZP_20629619.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|437031013|ref|ZP_20631413.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|437042662|ref|ZP_20636175.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|437050337|ref|ZP_20640482.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|437059541|ref|ZP_20646066.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|437063417|ref|ZP_20648051.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|437072599|ref|ZP_20652516.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|437083375|ref|ZP_20659118.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|437097241|ref|ZP_20665060.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|437108142|ref|ZP_20667452.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|437118405|ref|ZP_20670295.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|437131970|ref|ZP_20677714.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|437141429|ref|ZP_20683113.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|437148719|ref|ZP_20687696.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|437153675|ref|ZP_20690781.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|437158313|ref|ZP_20693235.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|437172639|ref|ZP_20701197.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|437178631|ref|ZP_20704801.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|437185051|ref|ZP_20708745.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|437230028|ref|ZP_20713294.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13183-1]
gi|437260072|ref|ZP_20717472.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|437272211|ref|ZP_20724097.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|437281394|ref|ZP_20728528.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|437283888|ref|ZP_20729282.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|437314696|ref|ZP_20737086.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|437326425|ref|ZP_20740187.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|437342098|ref|ZP_20745221.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|437411755|ref|ZP_20752929.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|437454505|ref|ZP_20760020.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|437464874|ref|ZP_20763845.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|437483796|ref|ZP_20768990.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|437491744|ref|ZP_20771476.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|437504149|ref|ZP_20775048.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|437539023|ref|ZP_20782131.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|437567836|ref|ZP_20787699.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|437579346|ref|ZP_20791686.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|437590148|ref|ZP_20794315.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|437608271|ref|ZP_20800570.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|437621184|ref|ZP_20804351.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|437631118|ref|ZP_20806340.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|437665923|ref|ZP_20814862.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|437682924|ref|ZP_20818695.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|437696801|ref|ZP_20822568.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|437712289|ref|ZP_20827041.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|437730850|ref|ZP_20831286.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|437772671|ref|ZP_20835768.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|437804279|ref|ZP_20838833.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|437898882|ref|ZP_20849690.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|437970733|ref|ZP_20852786.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-5646]
gi|438093130|ref|ZP_20861502.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|438100268|ref|ZP_20863909.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|438111278|ref|ZP_20868346.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|440763254|ref|ZP_20942297.1| protease TldD [Salmonella enterica subsp. enterica serovar Agona
str. SH11G1113]
gi|440770634|ref|ZP_20949583.1| protease TldD [Salmonella enterica subsp. enterica serovar Agona
str. SH08SF124]
gi|440775021|ref|ZP_20953906.1| protease TldD [Salmonella enterica subsp. enterica serovar Agona
str. SH10GFN094]
gi|445133928|ref|ZP_21382721.1| protease TldD [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|445170717|ref|ZP_21395813.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|445194825|ref|ZP_21400302.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|445228565|ref|ZP_21404756.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|445265055|ref|ZP_21410035.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
gi|445333090|ref|ZP_21414657.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|445347269|ref|ZP_21419097.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|445361851|ref|ZP_21423987.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|194403863|gb|ACF64085.1| protein TldD [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|195633399|gb|EDX51813.1| protein TldD [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|197214512|gb|ACH51909.1| protein TldD [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|205274050|emb|CAR39056.1| TldD protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|205348456|gb|EDZ35087.1| protein TldD [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|206710419|emb|CAR34777.1| TldD protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|326629392|gb|EGE35735.1| protein TldD [Salmonella enterica subsp. enterica serovar
Gallinarum str. SG9]
gi|353670365|gb|EHD06996.1| TldD protein [Salmonella enterica subsp. enterica serovar
Wandsworth str. A4-580]
gi|379985884|emb|CCF88025.1| protease TldD [Salmonella enterica subsp. enterica serovar
Senftenberg str. SS209]
gi|392612571|gb|EIW95042.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. Levine 15]
gi|392619632|gb|EIX02011.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. Levine 1]
gi|392731369|gb|EIZ88597.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21539]
gi|392735185|gb|EIZ92363.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35199]
gi|392744015|gb|EJA01073.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35185]
gi|392747682|gb|EJA04675.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 33953]
gi|392750292|gb|EJA07266.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35188]
gi|392750427|gb|EJA07395.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21559]
gi|392772259|gb|EJA28961.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35202]
gi|392781683|gb|EJA38324.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22513]
gi|392783191|gb|EJA39821.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21550]
gi|392786311|gb|EJA42868.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22425]
gi|392786761|gb|EJA43317.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21538]
gi|392798923|gb|EJA55192.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM N1543]
gi|392800508|gb|EJA56746.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM N18486]
gi|392806787|gb|EJA62871.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21554]
gi|392817522|gb|EJA73432.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 37978]
gi|392821076|gb|EJA76908.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22462]
gi|392827435|gb|EJA83140.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19593]
gi|395982774|gb|EJH91972.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|395993086|gb|EJI02188.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|395993776|gb|EJI02867.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|395994616|gb|EJI03692.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|395994908|gb|EJI03973.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|396005915|gb|EJI14887.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|396009503|gb|EJI18436.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|396017322|gb|EJI26188.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|396018227|gb|EJI27089.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|396021913|gb|EJI30727.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|396028205|gb|EJI36967.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|396028964|gb|EJI37715.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|396036237|gb|EJI44906.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|396036275|gb|EJI44942.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|396042925|gb|EJI51545.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|396051868|gb|EJI60383.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|396055110|gb|EJI63602.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|396058208|gb|EJI66675.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|396071972|gb|EJI80288.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|396073993|gb|EJI82285.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|434955862|gb|ELL49657.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22704]
gi|434955898|gb|ELL49686.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|434970056|gb|ELL62723.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|434976007|gb|ELL68273.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|434977581|gb|ELL69692.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|434985242|gb|ELL76929.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|434991076|gb|ELL82604.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|435000128|gb|ELL91289.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|435002810|gb|ELL93861.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|435010337|gb|ELM01114.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|435013230|gb|ELM03885.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|435014556|gb|ELM05115.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|435019092|gb|ELM09536.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|435023506|gb|ELM13753.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|435027637|gb|ELM17753.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE30663]
gi|435033367|gb|ELM23260.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|435044417|gb|ELM34101.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|435044457|gb|ELM34140.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|435047885|gb|ELM37453.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|435053073|gb|ELM42540.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|435056571|gb|ELM45953.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|435057903|gb|ELM47265.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|435063215|gb|ELM52378.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|435065510|gb|ELM54616.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|435073338|gb|ELM62213.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|435075908|gb|ELM64707.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|435081237|gb|ELM69884.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|435083312|gb|ELM71913.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|435092422|gb|ELM80779.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|435093041|gb|ELM81381.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|435102155|gb|ELM90269.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|435106832|gb|ELM94831.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|435108948|gb|ELM96913.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|435110129|gb|ELM98062.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|435120192|gb|ELN07788.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|435123082|gb|ELN10580.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|435127597|gb|ELN14957.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|435131482|gb|ELN18694.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|435132796|gb|ELN19987.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|435141426|gb|ELN28368.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|435144161|gb|ELN31005.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|435152098|gb|ELN38729.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|435152956|gb|ELN39578.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|435160253|gb|ELN46541.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|435164723|gb|ELN50795.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|435168922|gb|ELN54732.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|435169157|gb|ELN54956.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|435181223|gb|ELN66297.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|435186429|gb|ELN71262.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|435192352|gb|ELN76883.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|435193764|gb|ELN78243.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|435198186|gb|ELN82409.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13183-1]
gi|435203942|gb|ELN87673.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|435207662|gb|ELN91105.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|435216979|gb|ELN99433.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|435217517|gb|ELN99947.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|435229204|gb|ELO10592.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|435234270|gb|ELO15148.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|435236263|gb|ELO17007.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|435238427|gb|ELO19069.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|435241336|gb|ELO21689.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|435253040|gb|ELO32529.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|435255372|gb|ELO34736.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|435256592|gb|ELO35892.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|435264781|gb|ELO43675.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|435269630|gb|ELO48159.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|435276767|gb|ELO54763.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|435283666|gb|ELO61199.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|435287725|gb|ELO64838.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|435289257|gb|ELO66234.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|435302877|gb|ELO78804.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|435305556|gb|ELO81022.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|435315020|gb|ELO88320.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|435322149|gb|ELO94468.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|435325228|gb|ELO97102.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|435331248|gb|ELP02436.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|435339486|gb|ELP08391.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-5646]
gi|436411332|gb|ELP09285.1| protease TldD [Salmonella enterica subsp. enterica serovar Agona
str. SH08SF124]
gi|436411635|gb|ELP09583.1| protease TldD [Salmonella enterica subsp. enterica serovar Agona
str. SH10GFN094]
gi|436420616|gb|ELP18478.1| protease TldD [Salmonella enterica subsp. enterica serovar Agona
str. SH11G1113]
gi|444847534|gb|ELX72682.1| protease TldD [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|444862115|gb|ELX86978.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|444866015|gb|ELX90770.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|444866160|gb|ELX90908.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|444876299|gb|ELY00477.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|444877173|gb|ELY01325.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|444884452|gb|ELY08282.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|444888314|gb|ELY11903.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
Length = 481
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 263/480 (54%), Positives = 357/480 (74%), Gaps = 7/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L+ + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLNHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QGVGVRAISG+KT F Y+D IS L + ++ R+I + NG+ K+ K + + LY
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRE-NGEGKV-KTLAAVAHQPLY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ D + S++ EK+ +L RV+K+AR D RV +V A+L+G Y++IL+ DG + AD+R
Sbjct: 121 TTLDPLQSMSREEKLDILRRVDKVAREADKRVQEVNASLTGVYELILVAATDGTLAADVR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L V++ VE++G+RE G SG GGR+ Y YF ++ + +V AL+NL A
Sbjct: 181 PLVRLSVSVQVEEDGKRERGASGGGGRFGYEYFLADLDGEVRADAWAKEAVRMALVNLSA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG+++AS T+VD+G
Sbjct: 241 VAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQIGEQVASALCTVVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS+ IDDEG P Q LIENG+LKGYMQD +NARLM + TGN RRES+AH+P+
Sbjct: 301 TMMNRRGSVAIDDEGTPGQYNVLIENGVLKGYMQDKLNARLMGAAPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 361 PRMTNTYMLAGQSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTT 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGGT
Sbjct: 421 PVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGGT 480
>gi|254360890|ref|ZP_04977036.1| U62 family microcin-processing peptidase 2 [Mannheimia haemolytica
PHL213]
gi|452744891|ref|ZP_21944731.1| protease involved in Microcin B17 maturation and in sensitivity to
the DNA gyrase inhibitor LetD [Mannheimia haemolytica
serotype 6 str. H23]
gi|153092369|gb|EDN73432.1| U62 family microcin-processing peptidase 2 [Mannheimia haemolytica
PHL213]
gi|452087133|gb|EME03516.1| protease involved in Microcin B17 maturation and in sensitivity to
the DNA gyrase inhibitor LetD [Mannheimia haemolytica
serotype 6 str. H23]
Length = 481
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 261/480 (54%), Positives = 343/480 (71%), Gaps = 8/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN + LL P L+ L ++L + +DYAD YFQ +++E+W LE+ I+K G F I
Sbjct: 2 LNQVSNSLLAPSGLELSHLTQVLDHFSGRHIDYADLYFQLSQDESWSLEDSIIKEGGFYI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++G GVRAISG+KT F Y+D I+ L + RSI+ S G++ + KN KK S Y
Sbjct: 62 DRGFGVRAISGEKTGFAYADQITLKQLEQCAAAARSISPTS-GQLSV-KNFKKTTACSRY 119
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + +I+ +K++LL V+K AR+ DPRVI+V ANLS Y+ +L+ DG + ADIR
Sbjct: 120 PAINPLETISREQKVELLHLVDKTARMADPRVIQVNANLSAVYEEMLVAATDGTLAADIR 179
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTD------MILEKCVSNSVNSALINLE 495
PLV+L V+++VE+NG+RE G++G GGR+ ++F E +V AL+NL
Sbjct: 180 PLVRLSVSVLVEQNGKRERGSAGAGGRFGLDWFLAPSETGFSRAESLTKEAVRQALVNLT 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A PAPAG M +VLG GWPGILLHEA+GHGLEGDFNRK SS FS IG+ + S+ TIVD+
Sbjct: 240 AIPAPAGTMPIVLGAGWPGILLHEAVGHGLEGDFNRKESSLFSGKIGQMVTSELCTIVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ N RGSI +DDEG P+Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTVPNMRGSITVDDEGVPSQRNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTY+ G EE+I SV+ GLYA +FSGGQVDIT+GKFVFS ++AY+I+ GKIT
Sbjct: 360 MPRMTNTYLTEGNHEFEEMIESVEYGLYAPHFSGGQVDITSGKFVFSTAEAYLIEKGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PV GATLIG G +++VSM+G M+LDPG+G CGK+GQ VPVGVGQPT+K+D ITVGG
Sbjct: 420 KPVTGATLIGSGIEAMQQVSMVGKKMELDPGIGTCGKEGQSVPVGVGQPTVKLDKITVGG 479
>gi|198242449|ref|YP_002217337.1| protease TldD [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|200389248|ref|ZP_03215860.1| protein TldD [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|375120849|ref|ZP_09766016.1| protein TldD [Salmonella enterica subsp. enterica serovar Dublin
str. SD3246]
gi|445143818|ref|ZP_21386689.1| protease TldD [Salmonella enterica subsp. enterica serovar Dublin
str. SL1438]
gi|445154062|ref|ZP_21391627.1| protease TldD [Salmonella enterica subsp. enterica serovar Dublin
str. HWS51]
gi|197936965|gb|ACH74298.1| protein TldD [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|199606346|gb|EDZ04891.1| protein TldD [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|326625116|gb|EGE31461.1| protein TldD [Salmonella enterica subsp. enterica serovar Dublin
str. SD3246]
gi|444847720|gb|ELX72862.1| protease TldD [Salmonella enterica subsp. enterica serovar Dublin
str. SL1438]
gi|444851443|gb|ELX76533.1| protease TldD [Salmonella enterica subsp. enterica serovar Dublin
str. HWS51]
Length = 481
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 263/480 (54%), Positives = 357/480 (74%), Gaps = 7/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L+ + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLNHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QGVGVRAISG+KT F Y+D IS L + ++ R+I + NG+ K+ K + + LY
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRE-NGEGKV-KTLAAVAHQPLY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ D + S++ EK+ +L RV+K+AR D RV +V A+L+G Y++IL+ DG + AD+R
Sbjct: 121 TTLDPLQSMSREEKLDILRRVDKVAREADKRVQEVNASLTGVYELILVAATDGTLAADVR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L V++ VE++G+RE G SG GGR+ Y YF ++ + +V AL+NL A
Sbjct: 181 PLVRLSVSVQVEEDGKRERGASGGGGRFGYEYFLADLDGEVRADAWAKEAVRMALVNLSA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG+++AS T+VD+G
Sbjct: 241 VAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQIGEQVASALCTVVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS+ IDDEG P Q LIENG+LKGYMQD +NARLM + TGN RRES+AH+P+
Sbjct: 301 TMMNRRGSVAIDDEGTPGQYNVLIENGVLKGYMQDKLNARLMGATPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 361 PRMTNTYMLAGQSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTT 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGGT
Sbjct: 421 PVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGGT 480
>gi|262273863|ref|ZP_06051676.1| TldD protein probably a protease [Grimontia hollisae CIP 101886]
gi|262222278|gb|EEY73590.1| TldD protein probably a protease [Grimontia hollisae CIP 101886]
Length = 481
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 263/463 (56%), Positives = 341/463 (73%), Gaps = 7/463 (1%)
Query: 280 LLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFY 339
L + L ++ +DY D YFQ +E+ +LE+ I+K G+F+I++GVGVRAISG+KT F Y
Sbjct: 21 LSQTLEHLAARNIDYGDVYFQSCWHESLMLEDSIIKDGSFNIDRGVGVRAISGEKTGFAY 80
Query: 340 SDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLL 399
SD I+ + L+ + + R IA++ NGK+K+ + + +Y D + S+ +EKI LL
Sbjct: 81 SDQINADALMQSATAARGIADK-NGKLKVSAFATR-QYPMIYQAVDPLQSMTKQEKIALL 138
Query: 400 ERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRRE 459
+ V+ R K+P V +V ++ G Y+ +LI DG ADIRPLV+ V+++VEK+GRRE
Sbjct: 139 KDVDAYVRAKEPLVQEVSVSIVGVYEQVLIAATDGTYAADIRPLVRFSVSVLVEKDGRRE 198
Query: 460 IGNSGCGGRYNYNYFTDMILEKCVS-----NSVNSALINLEAKPAPAGIMKVVLGPGWPG 514
G++G GGR++Y YFT K V+ +V AL+NL AK APAG M VVLG GWPG
Sbjct: 199 RGSAGGGGRFDYTYFTSEEDGKTVAMNYADEAVRQALVNLHAKGAPAGTMPVVLGAGWPG 258
Query: 515 ILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPT 574
+LLHEA+GHGLEGDFNRK SS F+ IG+++ S TIVD+GTL +RRGS+NIDDEG P
Sbjct: 259 VLLHEAVGHGLEGDFNRKESSVFTGQIGEQVTSPLCTIVDDGTLKDRRGSLNIDDEGVPG 318
Query: 575 QCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEI 634
Q LIE GILKGYMQD NARLM ++ TGN RRES+AH+P+PRMTNTYML G+ PEEI
Sbjct: 319 QYNVLIEKGILKGYMQDKHNARLMGVAPTGNGRRESYAHLPMPRMTNTYMLAGESTPEEI 378
Query: 635 ISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKV 694
ISSV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+NGK+T PVKGATLIG G +++V
Sbjct: 379 ISSVEYGLYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTTPVKGATLIGSGIEAMQQV 438
Query: 695 SMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
SM+GND+KLD GVGVCGK GQ V VGVGQPTLK+D++TVGGT
Sbjct: 439 SMVGNDLKLDRGVGVCGKAGQSVAVGVGQPTLKLDAMTVGGTE 481
>gi|366158931|ref|ZP_09458793.1| protease TldD [Escherichia sp. TW09308]
Length = 481
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 263/481 (54%), Positives = 358/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSN-GKIKIIKNIKKIKINSL 380
+QGVGVRAISG+KT F Y+D IS L + ++ R+I S GK++ + ++ + L
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRDSGYGKVQTLGAVEH---SPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ +K+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTSLDPLQSMSREDKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE++G+RE G SG GGR+ Y +F ++ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQLGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM M+ TGN RRES+AH+P
Sbjct: 300 GTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KPVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|417373168|ref|ZP_12143261.1| TldD protein [Salmonella enterica subsp. enterica serovar Inverness
str. R8-3668]
gi|353603222|gb|EHC58377.1| TldD protein [Salmonella enterica subsp. enterica serovar Inverness
str. R8-3668]
Length = 515
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 263/480 (54%), Positives = 357/480 (74%), Gaps = 7/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L+ + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 37 LNLVSEQLLAANGLNHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 96
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QGVGVRAISG+KT F Y+D IS L + ++ R+I + NG+ K+ K + + LY
Sbjct: 97 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRE-NGEGKV-KTLAAVAHQPLY 154
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ D + S++ EK+ +L RV+K+AR D RV +V A+L+G Y++IL+ DG + AD+R
Sbjct: 155 TTLDPLQSMSREEKLDILRRVDKVAREADKRVQEVNASLTGVYELILVAATDGTLAADVR 214
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L V++ VE++G+RE G SG GGR+ Y YF ++ + +V AL+NL A
Sbjct: 215 PLVRLSVSVQVEEDGKRERGASGGGGRFGYEYFLADLDGEVRADAWAKEAVRMALVNLSA 274
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG+++AS T+VD+G
Sbjct: 275 VAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQIGEQVASALCTVVDDG 334
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS+ IDDEG P Q LIENG+LKGYMQD +NARLM + TGN RRES+AH+P+
Sbjct: 335 TMMNRRGSVAIDDEGTPGQYNVLIENGVLKGYMQDKLNARLMGAAPTGNGRRESYAHLPM 394
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 395 PRMTNTYMLAGQSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTT 454
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGGT
Sbjct: 455 PVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGGT 514
>gi|168233951|ref|ZP_02659009.1| protein TldD [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|168245045|ref|ZP_02669977.1| protein TldD [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|168822736|ref|ZP_02834736.1| protein TldD [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|194450951|ref|YP_002047396.1| protease TldD [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194470263|ref|ZP_03076247.1| protein TldD [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|386593051|ref|YP_006089451.1| TldD protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. B182]
gi|419730104|ref|ZP_14257056.1| protease TldD [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|419734741|ref|ZP_14261627.1| protease TldD [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|419739814|ref|ZP_14266556.1| protease TldD [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|419744784|ref|ZP_14271435.1| protease TldD [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|419750174|ref|ZP_14276641.1| protease TldD [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|421570453|ref|ZP_16016143.1| protease TldD [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|421576812|ref|ZP_16022404.1| protease TldD [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|421580188|ref|ZP_16025748.1| protease TldD [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|421582716|ref|ZP_16028249.1| protease TldD [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|194409255|gb|ACF69474.1| protein TldD [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194456627|gb|EDX45466.1| protein TldD [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|205332033|gb|EDZ18797.1| protein TldD [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|205336175|gb|EDZ22939.1| protein TldD [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|205340913|gb|EDZ27677.1| protein TldD [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|381295026|gb|EIC36149.1| protease TldD [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|381296759|gb|EIC37861.1| protease TldD [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|381297555|gb|EIC38644.1| protease TldD [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|381307534|gb|EIC48387.1| protease TldD [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|381307568|gb|EIC48420.1| protease TldD [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|383800092|gb|AFH47174.1| TldD protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. B182]
gi|402517346|gb|EJW24749.1| protease TldD [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|402520444|gb|EJW27792.1| protease TldD [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|402524282|gb|EJW31584.1| protease TldD [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|402532896|gb|EJW40084.1| protease TldD [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
Length = 481
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 263/480 (54%), Positives = 357/480 (74%), Gaps = 7/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L+ + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLNHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QGVGVRAISG+KT F Y+D IS L + ++ R+I + NG+ K+ K + + LY
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIV-RDNGEGKV-KTLAAVAHQPLY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ D + S++ EK+ +L RV+K+AR D RV +V A+L+G Y++IL+ DG + AD+R
Sbjct: 121 TTLDPLQSMSREEKLDILRRVDKVAREADKRVQEVNASLTGVYELILVAATDGTLAADVR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L V++ VE++G+RE G SG GGR+ Y YF ++ + +V AL+NL A
Sbjct: 181 PLVRLSVSVQVEEDGKRERGASGGGGRFGYEYFLADLDGEVRADAWAKEAVRMALVNLSA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG+++AS T+VD+G
Sbjct: 241 VAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQIGEQVASALCTVVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS+ IDDEG P Q LIENG+LKGYMQD +NARLM + TGN RRES+AH+P+
Sbjct: 301 TMMNRRGSVAIDDEGTPGQYNVLIENGVLKGYMQDKLNARLMGAAPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 361 PRMTNTYMLAGQSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTT 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGGT
Sbjct: 421 PVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGGT 480
>gi|227114378|ref|ZP_03828034.1| putative suppressor of the inhibitory activity of the carbon
storage regulator CsrA [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 481
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 252/480 (52%), Positives = 350/480 (72%), Gaps = 2/480 (0%)
Query: 259 IHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGN 318
IH S +L F L+ + L ++ + +VDYAD YFQ + E W LE GIV+
Sbjct: 3 IHASRAPVSPVLSAFSLETTEITHALNHIMQRQVDYADLYFQRRQQEGWQLENGIVRPTG 62
Query: 319 FSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKI 377
FS +QGVGVRA+SG+KTAF Y++D+ ++ A + R I+ Q N + + ++ I
Sbjct: 63 FSRDQGVGVRAVSGEKTAFSYTNDLRPQAILQAANTVREISRQGQNASVALPVSLPH-GI 121
Query: 378 NSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIV 437
+LY + + ++ K +LL +++ AR +DPRV +V A L+ ++ ILI R+DG +
Sbjct: 122 TTLYPSDNPLLAVTEEHKRQLLLSIDRQARARDPRVTQVTAYLNASHETILIARHDGRLA 181
Query: 438 ADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAK 497
D+RPLV L + ++VE+ GRRE G+SG G R +Y +F D + + V+ +V+ AL NL+A
Sbjct: 182 TDVRPLVNLVINVVVEQQGRRENGSSGGGRRLDYRFFADETVSQWVNQAVDQALNNLDAS 241
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
P PAG V+LG G PGILLHEAIGHGLEGDFNRKGSSAFS+ +G+R+A+ IT+VD+GT
Sbjct: 242 PVPAGTYSVILGAGSPGILLHEAIGHGLEGDFNRKGSSAFSSLLGERVAAPGITVVDDGT 301
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
LANRRGS+++DDEG P+QCTTLIE+GIL+GY+QD +NARLMN ++TGNARR S++ +P+P
Sbjct: 302 LANRRGSLHVDDEGTPSQCTTLIEDGILRGYLQDSLNARLMNTALTGNARRASYSMLPLP 361
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNTYML G++ EE+++SVKNGLYA F GGQVDI++GK+VFS ++AY+I+NG++T P
Sbjct: 362 RMTNTYMLAGQYPAEEVVASVKNGLYAVGFGGGQVDISSGKYVFSTTEAYLIENGRVTRP 421
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
VKGATLIGHGP L V+M+GND+ LD G C K+GQ +PV VGQPTL+ID++TVGG+
Sbjct: 422 VKGATLIGHGPEALLHVAMVGNDLALDDGNIACTKEGQSLPVSVGQPTLRIDNMTVGGSQ 481
>gi|1176217|sp|P45297.1|TLDD_HAEIN RecName: Full=Protein TldD homolog
Length = 482
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 255/481 (53%), Positives = 347/481 (72%), Gaps = 5/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN + LL P +L + LL I M +DYAD YFQ +++E+W+LE+GI+K G+F I
Sbjct: 2 LNQVSNTLLTPSNLSTQTLLNIFDIMSHRNIDYADLYFQLSQDESWVLEDGIIKEGSFHI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVGVRA+SG+KT F Y+D I+ +L ++ + IA G + + + Y
Sbjct: 62 DRGVGVRAVSGEKTGFAYADQINLASLQQCAEAVKGIAQVKQGNLISPSAFNVVNPIARY 121
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + S+ +KI+LL V++ AR +D RV KV A+LS Y+ +LI DG + ADIR
Sbjct: 122 AAINPLESLTKEKKIELLHLVDRTARAEDHRVTKVSASLSSVYEEVLIMATDGTLAADIR 181
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKC-----VSNSVNSALINLEA 496
PLV+L ++++VE+NG+RE G+ G GGR+ ++F +++ +V AL+NL A
Sbjct: 182 PLVRLSISVLVEENGKRERGSCGSGGRFGLDWFFEVVDGDIRAVLFAKEAVRQALVNLSA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS F+ IG+++ S TIVD+G
Sbjct: 242 VAAPAGLMPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSLFTGKIGEQVTSPLCTIVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS+ IDDEG P+QC LI++GIL+GYMQD MNARLM +S TGN RRES+AH+P+
Sbjct: 302 TIENRRGSLTIDDEGVPSQCNVLIKDGILQGYMQDKMNARLMGVSTTGNGRRESYAHLPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ +++I+SVK G+YA +F GGQVDIT+GKFVFS S+AY+I+ GKIT
Sbjct: 362 PRMTNTYMLAGQSQFDDLIASVKQGIYAPHFGGGQVDITSGKFVFSTSEAYLIEKGKITK 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G +++K+SM+ + +LD G+GVCGK+GQ VPVGVGQP LKID ITVGGT
Sbjct: 422 PVKGATLIGSGIEVMQKISMVADKSELDLGIGVCGKEGQSVPVGVGQPALKIDEITVGGT 481
Query: 737 N 737
N
Sbjct: 482 N 482
>gi|148244388|ref|YP_001219082.1| PmbA/TldD family DNA gyrase modulator [Candidatus Vesicomyosocius
okutanii HA]
gi|146326215|dbj|BAF61358.1| modulator of DNA gyrase, PmbA/TldD family [Candidatus
Vesicomyosocius okutanii HA]
Length = 475
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 262/471 (55%), Positives = 353/471 (74%), Gaps = 7/471 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL+ L+++I+ +L ++ DYAD YFQ + E+W LEE IVK+G + I+ GVG R
Sbjct: 5 LLDDHHLNQEIITTLLSSLAVKGTDYADLYFQHSAVESWFLEESIVKSGTYHISHGVGAR 64
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIA--NQSNGKIKIIKNIKKIKINSLYSFTDT 386
A+S D+T F YSDD++ ++ A+ + ++ + GKI+ + I ++ + YS +
Sbjct: 65 AVSFDQTGFAYSDDLNLRSIEKAINFAKGVSMYQTAVGKIQDFQPIPQV---AKYSGLNP 121
Query: 387 ISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQL 446
++S + +EK+ L R++KIAR K+ +V +V A++SG + +LIT DG+ D RP+V++
Sbjct: 122 LNSFSSQEKVDFLNRIDKIAR-KESKVTQVSASISGGFSEVLITSTDGVFAKDYRPMVRV 180
Query: 447 FVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKC-VSNSVNSALINLEAKPAPAGIMK 505
V +IVE NGR E +SG GGRY+Y YF + L++ V+ ++ AL+ LE+K APAG M
Sbjct: 181 SVNVIVECNGRIESASSGGGGRYDYQYFVNHALDEIYVNEAIRQALLALESKNAPAGSMP 240
Query: 506 VVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSI 565
V+LG GWPG+LLHEAIGHGLEGDFNRK SS F+N IG+++AS + TIVDNGTLANRRGS+
Sbjct: 241 VILGSGWPGVLLHEAIGHGLEGDFNRKKSSVFTNRIGEQVASDKCTIVDNGTLANRRGSL 300
Query: 566 NIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYML 625
IDDEG PTQ T LIENGILKGY+ D +NA+LM+ TGN RRES+AHIP+PRMTNTYML
Sbjct: 301 TIDDEGTPTQNTLLIENGILKGYLFDKINAKLMDTVSTGNGRRESYAHIPMPRMTNTYML 360
Query: 626 NGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIG 685
NG+ +++I+SV G+YA NF GGQVDIT+GKFVFSA++AY+IKNGKI +PVKG TLIG
Sbjct: 361 NGQDSLDDMIASVDYGIYAINFDGGQVDITSGKFVFSANEAYLIKNGKIMHPVKGVTLIG 420
Query: 686 HGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
G +LKK+SM+ ND+KLD GVG+CGKDGQ VPVGVGQP+LKID +TVGGT
Sbjct: 421 SGDKVLKKISMVANDLKLDNGVGICGKDGQNVPVGVGQPSLKIDQLTVGGT 471
>gi|146313315|ref|YP_001178389.1| protease TldD [Enterobacter sp. 638]
gi|145320191|gb|ABP62338.1| microcin-processing peptidase 2, Unknown type peptidase, MEROPS
family U62 [Enterobacter sp. 638]
Length = 481
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 256/481 (53%), Positives = 357/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L IL + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEHLLAANGLSHQDLFSILAQLTERRLDYGDLYFQSSYHESWVLEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D IS L + ++ R+I ++ +G++K + ++ +L
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQISLTALQQSAQAARTIVRETGDGRVKTLGEVQH---TAL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+L+G Y++IL+ DG + AD+
Sbjct: 120 YTSIDPLQSMSREEKLDILRRVDKVARAADKRVQEVSASLTGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V++ VE +G+RE G+SG GGR+ Y +F ++ + +V A++NL
Sbjct: 180 RPLVRLSVSVQVEDDGKRERGSSGGGGRFGYEWFLADEDGEVRADAWAKEAVRMAMVNLN 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ TI+D+
Sbjct: 240 AVAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGELVASELCTIIDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+A+RRGSI+IDDEG P Q LIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTMADRRGSISIDDEGTPGQYNVLIENGVLKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV G++A NF GGQVDIT+GKFVFS S+AY+I+ GK+T
Sbjct: 360 MPRMTNTYMLAGKSTPQEIIESVDYGIFAPNFGGGQVDITSGKFVFSTSEAYLIEKGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
VKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+DS+TVGG
Sbjct: 420 KAVKGATLIGSGIEAMQQISMVGNDLKLDKGVGVCGKEGQSLPVGVGQPTLKVDSLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|377579134|ref|ZP_09808106.1| TldD protein [Escherichia hermannii NBRC 105704]
gi|377539596|dbj|GAB53271.1| TldD protein [Escherichia hermannii NBRC 105704]
Length = 481
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 260/481 (54%), Positives = 358/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L+ + L ILG + + +VDY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVTEQLLSANGLNHQDLFSILGQLAERRVDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D +S L + + RSI Q +G+++ + ++ L
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQVSLLALEQSAHAARSIVREQGDGRVQTLGAVEH---KPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S+ EK+ +L+RV+ +AR D RV +V A+L+G Y++IL+ DG + AD+
Sbjct: 120 YTALDPLQSLTREEKLDILKRVDGVARAADARVQEVSASLTGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTD-----MILEKCVSNSVNSALINLE 495
RPLV+L V++ VE++G+RE G++G GGR+ Y +F + + + +V AL+NL
Sbjct: 180 RPLVRLSVSVQVEQDGKRERGSAGGGGRFGYEWFMEEADGEVRADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGQLVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+A+RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTMASRRGSVAIDDEGVPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLAGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIQNGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+DS+TVGG
Sbjct: 420 TPVKGATLIGSGIEAMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKLDSLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|119944885|ref|YP_942565.1| C69 family peptidase [Psychromonas ingrahamii 37]
gi|119863489|gb|ABM02966.1| microcin-processing peptidase 2, Unknown type peptidase, MEROPS
family U62 [Psychromonas ingrahamii 37]
Length = 481
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 252/474 (53%), Positives = 349/474 (73%), Gaps = 7/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
L P L L L + N++DYADFYFQ +++E+W+LE+GIVK G+++I +GVG+R
Sbjct: 10 FLAPAQLQISDLESQLAALNSNQIDYADFYFQSSRHESWLLEDGIVKDGSYNIEKGVGIR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+SG+KT F YSD IS + A + +SI +G+ K +K I +Y +D +
Sbjct: 70 AVSGEKTGFAYSDQISLKAIKEAADAAKSIVK--SGQEKQLKLILPTPSKLIYGESDPLI 127
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
S++ +KI LL++V++ R +P V V +L+ Y+ IL+ DG + DIRPLV+
Sbjct: 128 SLSREKKIALLKQVDQFTRALEPSVTDVTVSLNAVYEEILVAATDGTLATDIRPLVRFGC 187
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDM-----ILEKCVSNSVNSALINLEAKPAPAGI 503
++++EK G+RE G++G GGR++ +YF D ++ +V+ AL N+EA APAG
Sbjct: 188 SVLIEKKGKRERGSAGGGGRFDLDYFIDSSEGEEVVFGYARAAVHQALTNIEAIDAPAGS 247
Query: 504 MKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRG 563
M V++G GWPG+LLHEA+GHGLEGDFNRKGSSA++ IG ++AS++ TI+D+GTL +RRG
Sbjct: 248 MPVIVGAGWPGVLLHEAVGHGLEGDFNRKGSSAYAGRIGDKVASEQCTIIDDGTLGDRRG 307
Query: 564 SINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTY 623
S+NIDDEG TQ LIE G+LKGYMQD MNARLM ++ TGN RRES+AH+P+PRMTNT+
Sbjct: 308 SLNIDDEGTKTQRNVLIEKGVLKGYMQDKMNARLMGVAPTGNGRRESYAHLPMPRMTNTF 367
Query: 624 MLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATL 683
MLNG + EE+I SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NGKIT P+KGATL
Sbjct: 368 MLNGTYAHEELIESVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIENGKITTPIKGATL 427
Query: 684 IGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
IG+G + ++++SM+ N+M LD GVGVCGK+GQ +PVGVGQP++K+D +TVGGTN
Sbjct: 428 IGNGFDTMQQISMVANNMALDSGVGVCGKEGQSLPVGVGQPSVKVDQLTVGGTN 481
>gi|311277794|ref|YP_003940025.1| peptidase U62 modulator of DNA gyrase [Enterobacter cloacae SCF1]
gi|308746989|gb|ADO46741.1| peptidase U62 modulator of DNA gyrase [Enterobacter cloacae SCF1]
Length = 481
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 260/481 (54%), Positives = 356/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEHLLSANGLSHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D IS L + ++ R+I S +GK+K + + + L
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQISLLALEQSAQAARTIVRDSGDGKVKTLGAVAH---SPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K AR D RV +V A+L+G Y++IL+ DG + AD+
Sbjct: 120 YTSIDPLQSMSREEKLDILRRVDKTARAADKRVQEVTASLTGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V++ VE++G+RE G+SG GGR+ Y+YF ++ + +V AL+NL
Sbjct: 180 RPLVRLSVSVQVEEDGKRERGSSGGGGRFGYDYFLADLDGEVRADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGQLVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+A+RRGS+ IDDEG P Q LIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTIADRRGSVAIDDEGTPGQYNVLIENGVLKGYMQDKLNARLMGVNPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV G+YA NF GGQVDIT+GKFVFS S+AY+I+ GK+T
Sbjct: 360 MPRMTNTYMLAGKSTPQEIIESVDYGIYAPNFGGGQVDITSGKFVFSTSEAYLIEKGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
VKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KAVKGATLIGSGIEAMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|365103303|ref|ZP_09333335.1| protein tldD [Citrobacter freundii 4_7_47CFAA]
gi|363645642|gb|EHL84905.1| protein tldD [Citrobacter freundii 4_7_47CFAA]
Length = 481
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 263/480 (54%), Positives = 358/480 (74%), Gaps = 7/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QGVGVRAISG+KT F Y+D IS L + + R+I + NG K+ K + ++ +LY
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAHAARTIV-RDNGDGKV-KTLGAVEHQALY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ D + S++ EK+ +L RV+ +AR D RV +V A+L+G Y++IL+ DG + AD+R
Sbjct: 121 TSVDPLQSMSREEKLDILRRVDSVARAADKRVQEVTASLTGVYELILVAATDGTLAADVR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L V++ VE++G+RE G SG GGR+ Y+YF ++ + +V AL+NL A
Sbjct: 181 PLVRLSVSVQVEEDGKRERGASGGGGRFGYDYFLGDLDGEVRADAWAKEAVRMALVNLSA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+G
Sbjct: 241 VAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGHMGELVASELCTVVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+A+RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P+
Sbjct: 301 TMADRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML GK P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 361 PRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTK 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGGT
Sbjct: 421 PVKGATLIGSGIEAMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGGT 480
>gi|424123918|ref|ZP_17857225.1| csrA activity inhibitor TldD [Escherichia coli PA5]
gi|424136391|ref|ZP_17868839.1| csrA activity inhibitor TldD [Escherichia coli PA10]
gi|424571268|ref|ZP_18011813.1| csrA activity inhibitor TldD [Escherichia coli EC4448]
gi|425350011|ref|ZP_18736475.1| csrA activity inhibitor TldD [Escherichia coli EC1849]
gi|444948975|ref|ZP_21267278.1| modulator of DNA gyrase family protein [Escherichia coli 99.0839]
gi|390678738|gb|EIN54684.1| csrA activity inhibitor TldD [Escherichia coli PA5]
gi|390693990|gb|EIN68603.1| csrA activity inhibitor TldD [Escherichia coli PA10]
gi|390893697|gb|EIP53237.1| csrA activity inhibitor TldD [Escherichia coli EC4448]
gi|408263869|gb|EKI84697.1| csrA activity inhibitor TldD [Escherichia coli EC1849]
gi|444555741|gb|ELV33185.1| modulator of DNA gyrase family protein [Escherichia coli 99.0839]
Length = 472
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 261/474 (55%), Positives = 357/474 (75%), Gaps = 9/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
+L L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I+QGVGVR
Sbjct: 1 MLAANGLKHQDLFVILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNIDQGVGVR 60
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
AISG+KT F Y+D IS L + ++ R+IA S +GK++ + ++ + LY+ D +
Sbjct: 61 AISGEKTGFAYADQISLLALEQSAQAARTIARDSGDGKVQTLGAVEH---SPLYTSVDPL 117
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+RPLV+L
Sbjct: 118 QSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADVRPLVRLS 177
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEAKPAPAG 502
V++++E++G+RE G SG GGR+ Y +F ++ + +V AL+NL A APAG
Sbjct: 178 VSVLIEEDGKRERGASGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLSAVAAPAG 237
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+GT+ +RR
Sbjct: 238 TMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDDGTMVDRR 297
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+ IDDEG P Q LIENGILKGYMQD +NARLM M+ TGN RRES+AH+P+PRMTNT
Sbjct: 298 GSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLPMPRMTNT 357
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML GK P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T PVKGAT
Sbjct: 358 YMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTKPVKGAT 417
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
LIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGGT
Sbjct: 418 LIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGGT 471
>gi|381400386|ref|ZP_09925356.1| TldD -like protein [Kingella kingae PYKK081]
gi|380834606|gb|EIC14441.1| TldD -like protein [Kingella kingae PYKK081]
Length = 480
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 253/470 (53%), Positives = 348/470 (74%), Gaps = 3/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL L L K L + + VDYAD Y Q T E+W L+EG+VK+G+F I+QGVGVR
Sbjct: 12 LLHANQLSADELAKSLAIISNHHVDYADIYCQRTAFESWHLDEGMVKSGSFQIDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+ G+KTAF Y+D ++ + + A ++ + I + G I ++ + ++++ + I
Sbjct: 72 AVLGEKTAFAYADSLTADAIQRAAQTVKVIG--AAGNIAPVRVPTPVYGKAVHACANPII 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ EK+ LL++VE++A+ DPR+++V+A L+ E+D+I I R DG ADIRPLV+L V
Sbjct: 130 TLQSPEKVALLQKVEQLAKAADPRIVQVMAGLTCEHDMIYIARLDGKHAADIRPLVRLSV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVL 508
T+I ++ RRE G++G GGR++ YF D +++ V+ +V ALINLE++PAPAG M VVL
Sbjct: 190 TVIAKQGERREQGSAGGGGRFDLTYFDDAKIKEYVNKAVQQALINLESRPAPAGAMTVVL 249
Query: 509 GPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINID 568
G GWPG+LLHEA+GHGLEGDFNRK +S F+ IG+R+A+K +T++D G + +RRGS+NID
Sbjct: 250 GNGWPGVLLHEAVGHGLEGDFNRKQTSVFTGKIGERVAAKGVTVIDQGDITDRRGSLNID 309
Query: 569 DEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGK 628
DEGN T+ T LIE+GIL GYMQD NARLM + +TGN RRES++ + +PRMTNT+M +G
Sbjct: 310 DEGNETRRTVLIEDGILTGYMQDETNARLMGVDVTGNGRRESYSSVVMPRMTNTFMESGT 369
Query: 629 FHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGP 688
P+EII S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++NGK+ YPVKGAT+IG G
Sbjct: 370 HDPQEIIESMDKGIYAVNFGGGQVDITSGKFVFSASEAWWVENGKLQYPVKGATIIGSGS 429
Query: 689 NILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS-ITVGGTN 737
+LK VSMIGND LD GVGVCGKDGQ VPVGVGQPTL+ID+ +TVGG+
Sbjct: 430 EVLKHVSMIGNDSALDTGVGVCGKDGQSVPVGVGQPTLRIDAGLTVGGSE 479
>gi|419211694|ref|ZP_13754762.1| modulator of DNA gyrase family protein [Escherichia coli DEC8C]
gi|419263145|ref|ZP_13805553.1| modulator of DNA gyrase family protein [Escherichia coli DEC10B]
gi|419874017|ref|ZP_14395975.1| protease TldD [Escherichia coli O111:H11 str. CVM9534]
gi|419883479|ref|ZP_14404578.1| protease TldD [Escherichia coli O111:H11 str. CVM9545]
gi|420098882|ref|ZP_14610129.1| protease TldD [Escherichia coli O111:H11 str. CVM9455]
gi|420105791|ref|ZP_14616224.1| protease TldD [Escherichia coli O111:H11 str. CVM9553]
gi|424761044|ref|ZP_18188629.1| protease TldD [Escherichia coli O111:H11 str. CFSAN001630]
gi|378050066|gb|EHW12398.1| modulator of DNA gyrase family protein [Escherichia coli DEC8C]
gi|378103434|gb|EHW65103.1| modulator of DNA gyrase family protein [Escherichia coli DEC10B]
gi|388351699|gb|EIL16904.1| protease TldD [Escherichia coli O111:H11 str. CVM9534]
gi|388358291|gb|EIL22758.1| protease TldD [Escherichia coli O111:H11 str. CVM9545]
gi|394417793|gb|EJE91505.1| protease TldD [Escherichia coli O111:H11 str. CVM9553]
gi|394423833|gb|EJE97044.1| protease TldD [Escherichia coli O111:H11 str. CVM9455]
gi|421944586|gb|EKU01838.1| protease TldD [Escherichia coli O111:H11 str. CFSAN001630]
Length = 481
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 263/481 (54%), Positives = 358/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRAISG+KT F Y+D IS L + ++ R+I S +GK++ + ++ + L
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRDSGDGKVQTLGAVEH---SPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE++G+RE G SG GGR+ Y +F ++ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEEDGKRERGTSGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFN +G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNCRGTSVFSGQVGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM M+ TGN RRES+AH+P
Sbjct: 300 GTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KPVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|260857364|ref|YP_003231255.1| protease TldD [Escherichia coli O26:H11 str. 11368]
gi|415787520|ref|ZP_11494148.1| modulator of DNA gyrase family protein [Escherichia coli EPECa14]
gi|417296646|ref|ZP_12083893.1| TldD/PmbA family protein [Escherichia coli 900105 (10e)]
gi|419217632|ref|ZP_13760628.1| modulator of DNA gyrase family protein [Escherichia coli DEC8D]
gi|419256845|ref|ZP_13799347.1| modulator of DNA gyrase family protein [Escherichia coli DEC10A]
gi|419268957|ref|ZP_13811301.1| modulator of DNA gyrase family protein [Escherichia coli DEC10C]
gi|419274600|ref|ZP_13816890.1| modulator of DNA gyrase family protein [Escherichia coli DEC10D]
gi|419903855|ref|ZP_14422868.1| protease TldD [Escherichia coli O26:H11 str. CVM9942]
gi|419907679|ref|ZP_14426480.1| protease TldD [Escherichia coli O26:H11 str. CVM10026]
gi|420118264|ref|ZP_14627597.1| protease TldD [Escherichia coli O26:H11 str. CVM10021]
gi|420118665|ref|ZP_14627986.1| protease TldD [Escherichia coli O26:H11 str. CVM10030]
gi|420130205|ref|ZP_14638709.1| protease TldD [Escherichia coli O26:H11 str. CVM10224]
gi|420135075|ref|ZP_14643169.1| protease TldD [Escherichia coli O26:H11 str. CVM9952]
gi|424746928|ref|ZP_18175145.1| protease TldD [Escherichia coli O26:H11 str. CFSAN001629]
gi|425381516|ref|ZP_18765515.1| csrA activity inhibitor TldD [Escherichia coli EC1865]
gi|257756013|dbj|BAI27515.1| predicted peptidase TldD [Escherichia coli O26:H11 str. 11368]
gi|323154454|gb|EFZ40655.1| modulator of DNA gyrase family protein [Escherichia coli EPECa14]
gi|378060221|gb|EHW22420.1| modulator of DNA gyrase family protein [Escherichia coli DEC8D]
gi|378097939|gb|EHW59685.1| modulator of DNA gyrase family protein [Escherichia coli DEC10A]
gi|378108042|gb|EHW69658.1| modulator of DNA gyrase family protein [Escherichia coli DEC10C]
gi|378114325|gb|EHW75882.1| modulator of DNA gyrase family protein [Escherichia coli DEC10D]
gi|386260090|gb|EIJ15564.1| TldD/PmbA family protein [Escherichia coli 900105 (10e)]
gi|388368787|gb|EIL32408.1| protease TldD [Escherichia coli O26:H11 str. CVM9942]
gi|388376619|gb|EIL39511.1| protease TldD [Escherichia coli O26:H11 str. CVM10026]
gi|394380470|gb|EJE58214.1| protease TldD [Escherichia coli O26:H11 str. CVM10224]
gi|394401056|gb|EJE76917.1| protease TldD [Escherichia coli O26:H11 str. CVM10021]
gi|394420524|gb|EJE94046.1| protease TldD [Escherichia coli O26:H11 str. CVM9952]
gi|394433043|gb|EJF05106.1| protease TldD [Escherichia coli O26:H11 str. CVM10030]
gi|408294656|gb|EKJ13038.1| csrA activity inhibitor TldD [Escherichia coli EC1865]
gi|421947548|gb|EKU04620.1| protease TldD [Escherichia coli O26:H11 str. CFSAN001629]
Length = 481
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 263/481 (54%), Positives = 358/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRAISG+KT F Y+D IS L + ++ R+I S +GK++ + ++ + L
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRDSGDGKVQTLGAVEH---SPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE++G+RE G SG GGR+ Y +F ++ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFN +G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNCRGTSVFSGQVGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM M+ TGN RRES+AH+P
Sbjct: 300 GTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KPVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|452122814|ref|YP_007473062.1| protease TldD [Salmonella enterica subsp. enterica serovar Javiana
str. CFSAN001992]
gi|451911818|gb|AGF83624.1| protease TldD [Salmonella enterica subsp. enterica serovar Javiana
str. CFSAN001992]
Length = 481
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 263/480 (54%), Positives = 356/480 (74%), Gaps = 7/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L+ + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLNHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QGVGVRAISG+KT F Y+D IS L + ++ R+I + NG+ K+ K + + LY
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRE-NGEGKV-KTLAAVAHQPLY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ D + S++ EK+ +L RV+K AR D RV +V A+L+G Y++IL+ DG + AD+R
Sbjct: 121 TILDPLQSMSREEKLDILRRVDKAAREADKRVQEVNASLTGVYELILVAATDGTLAADVR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L V++ VE++G+RE G SG GGR+ Y YF ++ + +V AL+NL A
Sbjct: 181 PLVRLSVSVQVEEDGKRERGASGGGGRFGYEYFLADLDGEVRADAWAKEAVRMALVNLSA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG+++AS T+VD+G
Sbjct: 241 VAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQIGEQVASALCTVVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS+ IDDEG P Q LIENG+LKGYMQD +NARLM + TGN RRES+AH+P+
Sbjct: 301 TMMNRRGSVAIDDEGTPGQYNVLIENGVLKGYMQDKLNARLMGAAPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 361 PRMTNTYMLAGQSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTT 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGGT
Sbjct: 421 PVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGGT 480
>gi|409247081|ref|YP_006887782.1| Protein tldD [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|320087815|emb|CBY97579.1| Protein tldD [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
Length = 515
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 263/480 (54%), Positives = 357/480 (74%), Gaps = 7/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L+ + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 37 LNLVSEQLLAANGLNHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 96
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QGVGVRAISG+KT F Y+D IS L + ++ R+I + NG+ K+ K + + LY
Sbjct: 97 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIV-RDNGEGKV-KTLAAVAHQPLY 154
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ D + S++ EK+ +L RV+K+AR D RV +V A+L+G Y++IL+ DG + AD+R
Sbjct: 155 TTLDPLQSMSREEKLDILRRVDKVAREADKRVQEVNASLTGVYELILVAATDGTLAADVR 214
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L V++ VE++G+RE G SG GGR+ Y YF ++ + +V AL+NL A
Sbjct: 215 PLVRLSVSVQVEEDGKRERGASGGGGRFGYEYFLADLDGEVRADAWAKEAVRMALVNLSA 274
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG+++AS T+VD+G
Sbjct: 275 VAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQIGEQVASALCTVVDDG 334
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS+ IDDEG P Q LIENG+LKGYMQD +NARLM + TGN RRES+AH+P+
Sbjct: 335 TMMNRRGSVAIDDEGTPGQYNVLIENGVLKGYMQDKLNARLMGAAPTGNGRRESYAHLPM 394
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 395 PRMTNTYMLAGQSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTT 454
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGGT
Sbjct: 455 PVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGGT 514
>gi|114045996|ref|YP_736546.1| microcin-processing peptidase 2 [Shewanella sp. MR-7]
gi|113887438|gb|ABI41489.1| microcin-processing peptidase 2. Unknown type peptidase. MEROPS
family U62 [Shewanella sp. MR-7]
Length = 497
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 267/491 (54%), Positives = 363/491 (73%), Gaps = 12/491 (2%)
Query: 254 ISQKNIHPL--NIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEE 311
+S++ P + +S+L LD L L + ++KVD++D YFQ +++E+W+LE+
Sbjct: 10 LSERTAMPFLAQVEQSLLKGGLALDG--LQSYLNTIHQHKVDFSDLYFQGSRHESWVLED 67
Query: 312 GIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKN 371
GI+K G+F I +GVGVRAISG+KT F Y+DDI+ L A ++ R IA + ++
Sbjct: 68 GIIKDGSFHIERGVGVRAISGEKTGFAYADDITPAALSAAAEAARGIAGAG--EQAKVQA 125
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
K+ ++ +LY D I+++ +KI LL+ + R D R+I+V+ +L+G ++ IL+
Sbjct: 126 FKRQQVFALYDSLDPIAAMEEVKKINLLKEADAYIRSLDSRIIQVVISLAGVHEEILVAA 185
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF--TDMI-LEKCVS---N 485
+DG + ADIRPLV+ ++I+E+NG+RE G++G GGR++Y+ F TD L C +
Sbjct: 186 SDGTLAADIRPLVRFNCSVILEENGKRERGSAGGGGRHDYSVFMVTDETGLPMCFAFARE 245
Query: 486 SVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRI 545
+V A +NL A APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSSAFS +G+++
Sbjct: 246 AVRQAQVNLNAIDAPAGEMPVVLGNGWPGVLLHEAVGHGLEGDFNRKGSSAFSGMVGEQV 305
Query: 546 ASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGN 605
ASK +T+VD+GTLANRRGS++IDDEG TQ T LIE+GILKGYMQD +NARLM ++ TGN
Sbjct: 306 ASKLVTVVDDGTLANRRGSLSIDDEGVQTQRTVLIEDGILKGYMQDKLNARLMGVAPTGN 365
Query: 606 ARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASK 665
RRES+AH+P+PRMTNTYM G+ P EII SVK G+YA NF GGQVDIT+GKFVFSAS+
Sbjct: 366 GRRESYAHLPMPRMTNTYMTAGESDPSEIIKSVKKGIYAPNFGGGQVDITSGKFVFSASE 425
Query: 666 AYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPT 725
AY+I+NG++T +KGATLIG+GP + ++SM+GNDM LD GVGVCGKDGQ VPVGVGQPT
Sbjct: 426 AYLIENGEVTQAIKGATLIGNGPEAMSQISMVGNDMALDKGVGVCGKDGQSVPVGVGQPT 485
Query: 726 LKIDSITVGGT 736
LK+D +TVGGT
Sbjct: 486 LKLDRLTVGGT 496
>gi|253687539|ref|YP_003016729.1| peptidase U62 modulator of DNA gyrase [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251754117|gb|ACT12193.1| peptidase U62 modulator of DNA gyrase [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 481
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 251/479 (52%), Positives = 345/479 (72%)
Query: 259 IHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGN 318
IH + S L F L+ + L ++ + +VDYAD YFQ + E W +E GIV+
Sbjct: 3 IHATTTSVSPALSAFSLETTEITHALNHIMQRQVDYADLYFQRRQQEGWQVENGIVRPTG 62
Query: 319 FSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKIN 378
FS +QGVGVRA+SG+KTAF Y++D+ ++ A + R I+ Q +
Sbjct: 63 FSRDQGVGVRAVSGEKTAFSYTNDLRPQAILQAASTVREISRQGQTASVALPASLPHSAT 122
Query: 379 SLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVA 438
+LY + + +I K +LL +++ AR +DPRV +V A L+ ++ ILI R+DG + A
Sbjct: 123 TLYPSDNPLIAITEEHKRQLLFSIDRQARARDPRVTQVTAYLNASHETILIARHDGRLAA 182
Query: 439 DIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKP 498
D+RPLV L + ++VE+ GRRE G+SG G R +Y +FT+ + V+ +V+ AL NL+A P
Sbjct: 183 DVRPLVNLVINVVVEQQGRRENGSSGGGRRLDYGFFTEETVSHWVNQAVDQALNNLDASP 242
Query: 499 APAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL 558
PAG V+LG G PGILLHEAIGHGLEGDFNRKGSSAFS+ +G+R+A+ IT+VD+GTL
Sbjct: 243 VPAGTYSVILGAGSPGILLHEAIGHGLEGDFNRKGSSAFSSLLGERVAAPGITVVDDGTL 302
Query: 559 ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPR 618
A RRGS+++DDEG P+QCTTLIE+GIL+GY+QD +NARLMN ++TGNARR S++ +P+PR
Sbjct: 303 ATRRGSLHVDDEGTPSQCTTLIEDGILRGYLQDSLNARLMNTALTGNARRASYSTLPLPR 362
Query: 619 MTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPV 678
MTNTYML G++ EE+I+SVKNGLYA F GGQVDI++GK+VFS ++AY+I+NG++T PV
Sbjct: 363 MTNTYMLAGQYPAEEVIASVKNGLYAVGFGGGQVDISSGKYVFSTTEAYLIENGRVTRPV 422
Query: 679 KGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
KGATLIGHGP L V+M+GND+ LD G C K+GQ +PV VGQPTL+ID++TVGG+
Sbjct: 423 KGATLIGHGPEALLHVAMVGNDLALDDGNIACTKEGQSLPVSVGQPTLRIDNMTVGGSQ 481
>gi|415830771|ref|ZP_11516633.1| modulator of DNA gyrase family protein [Escherichia coli OK1357]
gi|417614851|ref|ZP_12265306.1| modulator of DNA gyrase family protein [Escherichia coli
STEC_EH250]
gi|323183005|gb|EFZ68404.1| modulator of DNA gyrase family protein [Escherichia coli OK1357]
gi|345360697|gb|EGW92866.1| modulator of DNA gyrase family protein [Escherichia coli
STEC_EH250]
Length = 472
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 261/474 (55%), Positives = 356/474 (75%), Gaps = 9/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
+L L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I+QGVGVR
Sbjct: 1 MLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNIDQGVGVR 60
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
AISG+KT F Y+D IS L + ++ R+I S +GK++ + ++ + LY+ D +
Sbjct: 61 AISGEKTGFAYADQISLLALEQSAQAARTIVRDSGDGKVQTLGAVEH---SPLYTSVDPL 117
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+RPLV+L
Sbjct: 118 QSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADVRPLVRLS 177
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEAKPAPAG 502
V+++VE++G+RE G SG GGR+ Y +F ++ + +V AL+NL A APAG
Sbjct: 178 VSVLVEEDGKRERGASGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLSAVAAPAG 237
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+GT+ +RR
Sbjct: 238 TMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDDGTMVDRR 297
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+ IDDEG P Q LIENGILKGYMQD +NARLM M+ TGN RRES+AH+P+PRMTNT
Sbjct: 298 GSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLPMPRMTNT 357
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML GK P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T PVKGAT
Sbjct: 358 YMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTKPVKGAT 417
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
LIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGGT
Sbjct: 418 LIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGGT 471
>gi|365972339|ref|YP_004953900.1| protein TldD [Enterobacter cloacae EcWSU1]
gi|365751252|gb|AEW75479.1| TldD [Enterobacter cloacae EcWSU1]
Length = 481
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 257/481 (53%), Positives = 358/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEHLLAANGLSHQDLFSILGQLTERRLDYGDLYFQSSYHESWVLEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D IS L + + R+I ++ +G++K + ++ ++L
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQISLAALEQSALAARTIVRETGDGRVKTLGEVQH---SAL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTSIDPLQSMSREEKLDILRRVDKVARAADKRVQEVSASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLE 495
RPLV+L V++ VE +G+RE G+SG GGR+ Y++F + + +V AL+NL
Sbjct: 180 RPLVRLSVSVQVEDDGKRERGSSGGGGRFGYDWFLGDVDGEARADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+R++S+ T+VD+
Sbjct: 240 AVAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGQRVSSELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGSI+IDDEG P Q LIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTMQDRRGSISIDDEGTPGQYNVLIENGVLKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV G++A NF GGQVDIT+GKFVFS S+AY+I+ GK+T
Sbjct: 360 MPRMTNTYMLPGKSTPQEIIESVDYGIFAPNFGGGQVDITSGKFVFSTSEAYLIEKGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
VKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KAVKGATLIGSGIEAMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|16762127|ref|NP_457744.1| protease TldD [Salmonella enterica subsp. enterica serovar Typhi
str. CT18]
gi|16766663|ref|NP_462278.1| protease TldD [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|29143616|ref|NP_806958.1| protease TldD [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
gi|167993952|ref|ZP_02575045.1| protein TldD [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168239393|ref|ZP_02664451.1| protein TldD [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|194735975|ref|YP_002116316.1| protease TldD [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197265231|ref|ZP_03165305.1| protein TldD [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|204931195|ref|ZP_03221989.1| protein TldD [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|213160818|ref|ZP_03346528.1| protease TldD [Salmonella enterica subsp. enterica serovar Typhi
str. E00-7866]
gi|213418104|ref|ZP_03351173.1| protease TldD [Salmonella enterica subsp. enterica serovar Typhi
str. E01-6750]
gi|213428315|ref|ZP_03361065.1| protease TldD [Salmonella enterica subsp. enterica serovar Typhi
str. E02-1180]
gi|213586679|ref|ZP_03368505.1| protease TldD [Salmonella enterica subsp. enterica serovar Typhi
str. E98-0664]
gi|213648440|ref|ZP_03378493.1| protease TldD [Salmonella enterica subsp. enterica serovar Typhi
str. J185]
gi|224585165|ref|YP_002638964.1| protease TldD [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|229037905|ref|YP_218293.2| protease TldD [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|238913552|ref|ZP_04657389.1| protease TldD [Salmonella enterica subsp. enterica serovar
Tennessee str. CDC07-0191]
gi|374979659|ref|ZP_09720993.1| TldD protein, part of proposed TldE/TldD proteolytic complex PMID
[Salmonella enterica subsp. enterica serovar Typhimurium
str. TN061786]
gi|375003233|ref|ZP_09727573.1| TldD protein [Salmonella enterica subsp. enterica serovar Infantis
str. SARB27]
gi|375116220|ref|ZP_09761390.1| suppresses inhibitory activity of CsrA [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SCSA50]
gi|378446752|ref|YP_005234384.1| TldD protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|378452194|ref|YP_005239554.1| protease TldD [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|378701268|ref|YP_005183226.1| TldD protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|378961462|ref|YP_005218948.1| hypothetical protein STBHUCCB_34710 [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|378985967|ref|YP_005249123.1| protease TldD [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|378990679|ref|YP_005253843.1| protease TldD [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
gi|379702630|ref|YP_005244358.1| suppresses inhibitory activity of CsrA [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|383498021|ref|YP_005398710.1| TldD protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|416424885|ref|ZP_11691993.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|416433463|ref|ZP_11696923.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|416436062|ref|ZP_11698170.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|416447866|ref|ZP_11706070.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|416454431|ref|ZP_11710281.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|416461049|ref|ZP_11715157.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|416462787|ref|ZP_11715709.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|416475165|ref|ZP_11720458.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|416490534|ref|ZP_11726727.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|416497873|ref|ZP_11729935.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|416509944|ref|ZP_11736872.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|416516228|ref|ZP_11739051.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|416526865|ref|ZP_11742703.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|416534203|ref|ZP_11747021.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|416545934|ref|ZP_11753577.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|416553420|ref|ZP_11757671.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|416564651|ref|ZP_11763412.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|416569790|ref|ZP_11765717.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
gi|416577145|ref|ZP_11769614.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|416586046|ref|ZP_11775291.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|416589220|ref|ZP_11776872.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|416601005|ref|ZP_11784768.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|416605479|ref|ZP_11786967.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|416615149|ref|ZP_11793226.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|416617813|ref|ZP_11794324.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|416634453|ref|ZP_11802573.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|416638496|ref|ZP_11803967.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|416646645|ref|ZP_11807852.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|416662438|ref|ZP_11815937.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|416671242|ref|ZP_11820625.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|416685269|ref|ZP_11824919.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|416696872|ref|ZP_11828077.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|416706578|ref|ZP_11831790.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|416714128|ref|ZP_11837579.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|416718773|ref|ZP_11840881.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|416725736|ref|ZP_11845959.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|416732832|ref|ZP_11849946.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|416742287|ref|ZP_11855732.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|416747534|ref|ZP_11858294.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|416752405|ref|ZP_11860328.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|416765721|ref|ZP_11869026.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|416767916|ref|ZP_11870255.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|417344091|ref|ZP_12124518.1| TldD protein [Salmonella enterica subsp. enterica serovar Baildon
str. R6-199]
gi|417361029|ref|ZP_12135015.1| TldD protein [Salmonella enterica subsp. enterica serovar Give str.
S5-487]
gi|417362656|ref|ZP_12136247.1| TldD protein [Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
gi|417523465|ref|ZP_12184040.1| TldD protein [Salmonella enterica subsp. enterica serovar Urbana
str. R8-2977]
gi|418484633|ref|ZP_13053626.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|418486260|ref|ZP_13055230.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|418494817|ref|ZP_13061265.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|418500424|ref|ZP_13066820.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|418505865|ref|ZP_13072211.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|418507194|ref|ZP_13073518.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|418510855|ref|ZP_13077128.1| protease TldD [Salmonella enterica subsp. enterica serovar Pomona
str. ATCC 10729]
gi|418524322|ref|ZP_13090308.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
gi|418789038|ref|ZP_13344827.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19447]
gi|418794472|ref|ZP_13350193.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19449]
gi|418797672|ref|ZP_13353358.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19567]
gi|422027596|ref|ZP_16373934.1| protease TldD [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|422032638|ref|ZP_16378743.1| protease TldD [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|427554427|ref|ZP_18929235.1| protease TldD [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|427576955|ref|ZP_18935185.1| protease TldD [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|427593046|ref|ZP_18938752.1| protease TldD [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|427617472|ref|ZP_18943664.1| protease TldD [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|427640860|ref|ZP_18948518.1| protease TldD [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|427657624|ref|ZP_18953266.1| protease TldD [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|427659364|ref|ZP_18954930.1| protease TldD [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|427677603|ref|ZP_18963044.1| protease TldD [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|25305220|pir||AE0911 TldD protein [imported] - Salmonella enterica subsp. enterica
serovar Typhi (strain CT18)
gi|16421928|gb|AAL22237.1| suppresses inhibitory activity of CsrA [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|16504430|emb|CAD07883.1| TldD protein [Salmonella enterica subsp. enterica serovar Typhi]
gi|29139251|gb|AAO70818.1| tldD protein [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
gi|194711477|gb|ACF90698.1| protein TldD [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197243486|gb|EDY26106.1| protein TldD [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|197287903|gb|EDY27291.1| protein TldD [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|204319962|gb|EDZ05168.1| protein TldD [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|205328098|gb|EDZ14862.1| protein TldD [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|224469693|gb|ACN47523.1| TldD protein [Salmonella enterica subsp. enterica serovar Paratyphi
C strain RKS4594]
gi|261248531|emb|CBG26369.1| TldD protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|267995573|gb|ACY90458.1| protease TldD [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|301159917|emb|CBW19436.1| TldD protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|312914396|dbj|BAJ38370.1| protease TldD [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|321225210|gb|EFX50269.1| TldD protein, part of proposed TldE/TldD proteolytic complex PMID
[Salmonella enterica subsp. enterica serovar Typhimurium
str. TN061786]
gi|322614509|gb|EFY11439.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322618269|gb|EFY15160.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322625982|gb|EFY22796.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322626752|gb|EFY23549.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322631320|gb|EFY28080.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322635413|gb|EFY32127.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322643413|gb|EFY39977.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322647018|gb|EFY43519.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322649747|gb|EFY46174.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|322655579|gb|EFY51885.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322658391|gb|EFY54656.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322664385|gb|EFY60581.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322667395|gb|EFY63557.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322674643|gb|EFY70735.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322675726|gb|EFY71799.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322682362|gb|EFY78385.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|322684773|gb|EFY80774.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|322716366|gb|EFZ07937.1| suppresses inhibitory activity of CsrA [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SCSA50]
gi|323131729|gb|ADX19159.1| suppresses inhibitory activity of CsrA [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|323196149|gb|EFZ81309.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323196715|gb|EFZ81860.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323204352|gb|EFZ89361.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323210010|gb|EFZ94915.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|323214275|gb|EFZ99028.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323219047|gb|EGA03553.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323225030|gb|EGA09283.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323230382|gb|EGA14501.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323233358|gb|EGA17452.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323239395|gb|EGA23445.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323242354|gb|EGA26380.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|323247292|gb|EGA31257.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|323250382|gb|EGA34266.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|323256830|gb|EGA40545.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|323263886|gb|EGA47405.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323264093|gb|EGA47601.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|323271648|gb|EGA55067.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|332990226|gb|AEF09209.1| protease TldD [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
gi|353077921|gb|EHB43681.1| TldD protein [Salmonella enterica subsp. enterica serovar Infantis
str. SARB27]
gi|353585182|gb|EHC45098.1| TldD protein [Salmonella enterica subsp. enterica serovar Give str.
S5-487]
gi|353601865|gb|EHC57381.1| TldD protein [Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
gi|353670957|gb|EHD07395.1| TldD protein [Salmonella enterica subsp. enterica serovar Urbana
str. R8-2977]
gi|357954605|gb|EHJ80722.1| TldD protein [Salmonella enterica subsp. enterica serovar Baildon
str. R6-199]
gi|363549571|gb|EHL33907.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|363556520|gb|EHL40733.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|363562690|gb|EHL46780.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|363562740|gb|EHL46829.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|363567827|gb|EHL51825.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|363570517|gb|EHL54448.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|363576192|gb|EHL60030.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
gi|366057972|gb|EHN22267.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|366060821|gb|EHN25077.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|366068172|gb|EHN32320.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|366068879|gb|EHN33011.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|366076114|gb|EHN40154.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|366081502|gb|EHN45445.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|366085293|gb|EHN49180.1| protease TldD [Salmonella enterica subsp. enterica serovar Pomona
str. ATCC 10729]
gi|366830802|gb|EHN57669.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|372207747|gb|EHP21245.1| protease TldD [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
gi|374355334|gb|AEZ47095.1| hypothetical protein STBHUCCB_34710 [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|380464842|gb|AFD60245.1| TldD protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|392761298|gb|EJA18124.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19447]
gi|392761862|gb|EJA18681.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19449]
gi|392769111|gb|EJA25857.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19567]
gi|414014319|gb|EKS98166.1| protease TldD [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|414015586|gb|EKS99398.1| protease TldD [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|414015776|gb|EKS99573.1| protease TldD [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|414025728|gb|EKT09031.1| protease TldD [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|414030272|gb|EKT13393.1| protease TldD [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|414032969|gb|EKT15951.1| protease TldD [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|414043636|gb|EKT26123.1| protease TldD [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|414043887|gb|EKT26356.1| protease TldD [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|414056731|gb|EKT38527.1| protease TldD [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|414058540|gb|EKT40201.1| protease TldD [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
Length = 481
Score = 530 bits (1365), Expect = e-147, Method: Compositional matrix adjust.
Identities = 263/480 (54%), Positives = 356/480 (74%), Gaps = 7/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L+ + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLNHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QGVGVRAISG+KT F Y+D IS L + ++ R+I + NG+ K+ K + + LY
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRE-NGEGKV-KTLAAVAHQPLY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ D + S++ EK+ +L RV+K AR D RV +V A+L+G Y++IL+ DG + AD+R
Sbjct: 121 TTLDPLQSMSREEKLDILRRVDKAAREADKRVQEVNASLTGVYELILVAATDGTLAADVR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L V++ VE++G+RE G SG GGR+ Y YF ++ + +V AL+NL A
Sbjct: 181 PLVRLSVSVQVEEDGKRERGASGGGGRFGYEYFLADLDGEVRADAWAKEAVRMALVNLSA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG+++AS T+VD+G
Sbjct: 241 VAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQIGEQVASALCTVVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS+ IDDEG P Q LIENG+LKGYMQD +NARLM + TGN RRES+AH+P+
Sbjct: 301 TMMNRRGSVAIDDEGTPGQYNVLIENGVLKGYMQDKLNARLMGAAPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 361 PRMTNTYMLAGQSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTT 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGGT
Sbjct: 421 PVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGGT 480
>gi|417829720|ref|ZP_12476265.1| modulator of DNA gyrase family protein [Shigella flexneri J1713]
gi|335574117|gb|EGM60455.1| modulator of DNA gyrase family protein [Shigella flexneri J1713]
Length = 481
Score = 530 bits (1365), Expect = e-147, Method: Compositional matrix adjust.
Identities = 263/481 (54%), Positives = 358/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRAISG+KT F Y+D IS L + ++ R+I S +GK++ + ++ + L
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRDSGDGKVQTLGAVEH---SPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE++G+RE G SG GGR+ Y +F ++ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGS+ IDDEG Q LIENGILKGYMQD +NARLM M+ TGN RRES+AH+P
Sbjct: 300 GTMVDRRGSVAIDDEGTLGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KPVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|68250255|ref|YP_249367.1| hypothetical protein NTHI1955 [Haemophilus influenzae 86-028NP]
gi|68058454|gb|AAX88707.1| TldD [Haemophilus influenzae 86-028NP]
Length = 482
Score = 530 bits (1365), Expect = e-147, Method: Compositional matrix adjust.
Identities = 254/481 (52%), Positives = 347/481 (72%), Gaps = 5/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN + LL P +L + LL I M +DYAD YFQ +++E+W+LE+GI+K G F I
Sbjct: 2 LNQVSNTLLTPSNLSTQTLLNIFDIMSHRNIDYADLYFQLSQDESWVLEDGIIKEGGFHI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVGVRA+SG+KT F Y+D I+ +L ++ + IA G + + + + Y
Sbjct: 62 DRGVGVRAVSGEKTGFAYADQINLASLQQCAEAVKGIAQVKQGNLISLSAFNVVNPIARY 121
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + S+ +KI+LL V++ AR +D RV KV A+LS Y+ +LI DG + ADIR
Sbjct: 122 AAINPLESLTKEKKIELLHLVDRTARAEDHRVTKVSASLSSVYEEVLIMATDGTLAADIR 181
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKC-----VSNSVNSALINLEA 496
PLV+L ++++VE+NG+RE G+ G GGR+ ++F +++ +V AL+NL A
Sbjct: 182 PLVRLSISVLVEENGKRERGSCGSGGRFGLDWFFEVVDGDIRAVLFAKEAVRQALVNLSA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS F+ IG+++ S TIVD+G
Sbjct: 242 VAAPAGLMPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSLFTGKIGEQVTSPLCTIVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS+ IDDEG P+QC LI++GIL+GYMQD MNARLM ++ TGN RRES+AH+P+
Sbjct: 302 TIENRRGSLTIDDEGVPSQCNVLIKDGILQGYMQDKMNARLMGVAPTGNGRRESYAHLPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ +++I+SVK G+YA +F GGQVDIT+GKFVFS S+AY+I+ GKIT
Sbjct: 362 PRMTNTYMLAGQSQFDDLIASVKQGIYAPHFGGGQVDITSGKFVFSTSEAYLIEKGKITK 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G +++K+SM+ + +LD G+GVCGK+GQ VPVGVGQP LKID ITVGGT
Sbjct: 422 PVKGATLIGSGIEVMQKISMVADKSELDLGIGVCGKEGQSVPVGVGQPALKIDEITVGGT 481
Query: 737 N 737
N
Sbjct: 482 N 482
>gi|300718642|ref|YP_003743445.1| Modulator of DNA gyrase [Erwinia billingiae Eb661]
gi|299064478|emb|CAX61598.1| Modulator of DNA gyrase [Erwinia billingiae Eb661]
Length = 481
Score = 530 bits (1365), Expect = e-147, Method: Compositional matrix adjust.
Identities = 265/481 (55%), Positives = 351/481 (72%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL +++++ L +LG + + K+DYAD YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLTANNINQQDLFSLLGQLSERKLDYADLYFQSSFHESWVLEDRIIKDGSWNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D I+ N L + + RSI Q NGK + + SL
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQITLNALTQSATAARSIVREQGNGKSHTLGAVMH---RSL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y D + S+ EKI LL RV+ AR D RV +V A+LSG Y++IL+ DG + DI
Sbjct: 120 YPTVDPLQSLTREEKIALLHRVDSAARAADKRVQEVSASLSGVYEMILVAATDGTLATDI 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V++ VE+NG+RE G+SG GGR+ Y +F +M E +V AL+NL
Sbjct: 180 RPLVRLSVSVQVEENGKRERGSSGGGGRFGYEFFLADESGEMRAEAWAREAVRMALVNLN 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGTIPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGQLVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ RGS+ +DDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTIEGLRGSLAVDDEGVPGQYNVLIENGILKGYMQDKLNARLMGVNPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P++II SV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLAGKSTPQDIIESVEYGLYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK+D +TVGG
Sbjct: 420 KPVKGATLIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLDKLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|418847631|ref|ZP_13402379.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19443]
gi|418860510|ref|ZP_13415088.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19470]
gi|418861461|ref|ZP_13416018.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19536]
gi|418870104|ref|ZP_13424533.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 4176]
gi|392806746|gb|EJA62831.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19443]
gi|392826625|gb|EJA82349.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19470]
gi|392832694|gb|EJA88311.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 4176]
gi|392838596|gb|EJA94154.1| protease TldD [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19536]
Length = 481
Score = 530 bits (1365), Expect = e-147, Method: Compositional matrix adjust.
Identities = 263/480 (54%), Positives = 356/480 (74%), Gaps = 7/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L+ + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLNHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QGVGVRAISG+KT F Y+D IS L + ++ R+I + NG+ K+ K + + LY
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRE-NGEGKV-KTLAAVAHQPLY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ D + S++ EK+ +L RV+K AR D RV +V A+L+G Y++IL+ DG + AD+R
Sbjct: 121 TTLDPLQSMSREEKLDILRRVDKAAREADKRVQEVNASLTGVYELILVAATDGTLAADVR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L V++ VE++G+RE G SG GGR+ Y YF ++ + +V AL+NL A
Sbjct: 181 PLVRLSVSVQVEEDGKRERGASGGGGRFGYEYFLADLDGEVRADAWAKEAVRMALVNLSA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG+++AS T+VD+G
Sbjct: 241 VAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQIGEQVASALCTVVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS+ IDDEG P Q LIENG+LKGYMQD +NARLM + TGN RRES+AH+P+
Sbjct: 301 TMMNRRGSVAIDDEGTPGQYNVLIENGVLKGYMQDKLNARLMGATPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 361 PRMTNTYMLAGQSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTT 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGGT
Sbjct: 421 PVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGGT 480
>gi|30995465|ref|NP_439795.2| hypothetical protein HI1653 [Haemophilus influenzae Rd KW20]
Length = 482
Score = 530 bits (1365), Expect = e-147, Method: Compositional matrix adjust.
Identities = 255/481 (53%), Positives = 346/481 (71%), Gaps = 5/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN + LL P +L + LL I M +DYAD YFQ +++E+W+LE+GI+K G+F I
Sbjct: 2 LNQVSNTLLTPSNLSTQTLLNIFDIMSHRNIDYADLYFQLSQDESWVLEDGIIKEGSFHI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVGVRA+SG+KT F Y+D I+ +L ++ + IA G + + + Y
Sbjct: 62 DRGVGVRAVSGEKTGFAYADQINLASLQQCAEAVKGIAQVKQGNLISPSAFNVVNPIARY 121
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + S+ +KI+LL V++ AR +D RV KV A+LS Y+ +LI DG + ADIR
Sbjct: 122 AAINPLESLTKEKKIELLHLVDRTARAEDHRVTKVSASLSSVYEEVLIMATDGTLAADIR 181
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKC-----VSNSVNSALINLEA 496
PLV+L ++++VE+NG+RE G+ G GGR+ ++F +++ +V AL+NL A
Sbjct: 182 PLVRLSISVLVEENGKRERGSCGSGGRFGLDWFFEVVDGDIRAVLFAKEAVRQALVNLSA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS F+ IG+++ S TIVD+G
Sbjct: 242 VAAPAGLMPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSLFTGKIGEQVTSPLCTIVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS+ IDDEG P+QC LI++GIL+GYMQD MNARLM S TGN RRES+AH+P+
Sbjct: 302 TIENRRGSLTIDDEGVPSQCNVLIKDGILQGYMQDKMNARLMGRSTTGNGRRESYAHLPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ +++I+SVK G+YA +F GGQVDIT+GKFVFS S+AY+I+ GKIT
Sbjct: 362 PRMTNTYMLAGQSQFDDLIASVKQGIYAPHFGGGQVDITSGKFVFSTSEAYLIEKGKITK 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G +++K+SM+ + +LD G+GVCGK+GQ VPVGVGQP LKID ITVGGT
Sbjct: 422 PVKGATLIGSGIEVMQKISMVADKSELDLGIGVCGKEGQSVPVGVGQPALKIDEITVGGT 481
Query: 737 N 737
N
Sbjct: 482 N 482
>gi|423203343|ref|ZP_17189921.1| hypothetical protein HMPREF1167_03504 [Aeromonas veronii AER39]
gi|404613087|gb|EKB10123.1| hypothetical protein HMPREF1167_03504 [Aeromonas veronii AER39]
Length = 482
Score = 530 bits (1365), Expect = e-147, Method: Compositional matrix adjust.
Identities = 267/481 (55%), Positives = 362/481 (75%), Gaps = 7/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L+ + LL P DLDE L ++L ++ ++V++ D YFQ + +E+W+LE+GIVK G+++I
Sbjct: 4 LSQVSASLLAPNDLDEGRLQQLLSSLMSHQVEFGDLYFQRSWHESWMLEDGIVKDGSYNI 63
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QGVGVRA+SG+KT F YSD++S L +V T + + G +K + + N LY
Sbjct: 64 DQGVGVRAVSGEKTGFAYSDELSLLALQQSV--TAARGIAAAGAHGKVKAWARTEANLLY 121
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
D + +++ +KI LLE+++K AR DP + +V+A++SG Y+ +L+ DG + AD+R
Sbjct: 122 PAMDPLQTLDKHQKIALLEQMDKFARSLDPAINQVMASISGVYEEVLVAATDGTLAADVR 181
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-LEK----CVSNSVNSALINLEA 496
PLV+L VT+I EK RRE G++G GGR+ Y++F ++ LE V +V AL+NLEA
Sbjct: 182 PLVRLSVTVIAEKGERRERGSAGGGGRFGYDWFLELDGLESRAFGYVREAVRQALVNLEA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSSAF+ IG+++ASK TIVD+G
Sbjct: 242 IDAPAGTMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSAFAGRIGEQVASKHCTIVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ RRGS++IDDEG P LIENGILKGY+QD NARLM + +TGN RRES+A +P+
Sbjct: 302 TMPGRRGSVSIDDEGTPGGYNVLIENGILKGYLQDKQNARLMGVPLTGNGRRESYAAMPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G++ P EII+SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I++GKIT
Sbjct: 362 PRMTNTYMLAGQYDPAEIIASVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIEDGKITA 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG+GP + +VSM+G+D+ LD GVG+CGK+GQ VPVGVGQPTLK+D +TVGGT
Sbjct: 422 PIKGATLIGNGPEAMSQVSMVGSDLALDRGVGICGKEGQSVPVGVGQPTLKLDQLTVGGT 481
Query: 737 N 737
+
Sbjct: 482 S 482
>gi|392552627|ref|ZP_10299764.1| suppressor of CsrA inhibitory activity; peptidase; involved in the
control of DNA gyrase [Pseudoalteromonas spongiae
UST010723-006]
Length = 483
Score = 530 bits (1365), Expect = e-147, Method: Compositional matrix adjust.
Identities = 254/474 (53%), Positives = 355/474 (74%), Gaps = 7/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL L + LL L + ++++DYAD YFQ + +E+W+LE+GIVK G+++I +GVGVR
Sbjct: 9 LLAQSGLSRQDLLDSLSLIQEHQIDYADLYFQSSHHESWVLEDGIVKDGSYNIERGVGVR 68
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKIN-SLYSFTDTI 387
A+SG+KT F YSD I+KN + A + RS+A++++ + K I+ ++++ ++ I
Sbjct: 69 AVSGEKTGFSYSDAINKNAITQAALAARSVADKNSAALNTSK-IQVVELDKNIIQPIMPI 127
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
SS+ EKI LL++++ R P +V+ +++ Y+ +LI +DG D+RPL++L
Sbjct: 128 SSLTDGEKIDLLKQIDAYIRKIAPNASQVVCSMAAVYEEVLIAASDGTFATDVRPLIRLN 187
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEK-----CVSNSVNSALINLEAKPAPAG 502
++++E++G+RE G++G G R +Y YF +M+ K +V A +NL A APAG
Sbjct: 188 ASVLLEQDGKRERGSAGGGARLDYGYFYEMVDGKPRWMTYADEAVRLANVNLAAIEAPAG 247
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
M VVLG GWPG+LLHEA+GHGLEGDFNRKGSSAFS +G+++AS T+VD+GTL NRR
Sbjct: 248 TMPVVLGGGWPGVLLHEAVGHGLEGDFNRKGSSAFSGKVGQQVASSLCTVVDDGTLDNRR 307
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+N+DDEG LIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNT
Sbjct: 308 GSLNVDDEGVAAGYNVLIENGVLKGYMQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNT 367
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML G+ +EII SV+NG++ATNF+GGQVDIT+GKFVFSAS+AY+IK+GK+T P+KGAT
Sbjct: 368 YMLAGESTQQEIIESVENGIFATNFAGGQVDITSGKFVFSASEAYLIKDGKVTQPIKGAT 427
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
LIG+GP+++ K+SM+GND+ LD GVGVCGKDGQ VPVGVGQP+LKID +TVGGT
Sbjct: 428 LIGNGPDVMHKISMVGNDLSLDNGVGVCGKDGQSVPVGVGQPSLKIDELTVGGT 481
>gi|161616387|ref|YP_001590352.1| protease TldD [Salmonella enterica subsp. enterica serovar
Paratyphi B str. SPB7]
gi|161365751|gb|ABX69519.1| hypothetical protein SPAB_04196 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 515
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 263/480 (54%), Positives = 356/480 (74%), Gaps = 7/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L+ + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 37 LNLVSEQLLAANGLNHQDLFAILGQLVERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 96
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QGVGVRAISG+KT F Y+D IS L + ++ R+I + NG+ K+ K + + LY
Sbjct: 97 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRE-NGEGKV-KTLAAVAHQPLY 154
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ D + S++ EK+ +L RV+K AR D RV +V A+L+G Y++IL+ DG + AD+R
Sbjct: 155 TTLDPLQSMSREEKLDILRRVDKAAREADKRVQEVNASLTGVYELILVAATDGTLAADVR 214
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L V++ VE++G+RE G SG GGR+ Y YF ++ + +V AL+NL A
Sbjct: 215 PLVRLSVSVQVEEDGKRERGASGGGGRFGYEYFLADLDGEVRADAWAKEAVRMALVNLSA 274
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG+++AS T+VD+G
Sbjct: 275 VAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQIGEQVASALCTVVDDG 334
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS+ IDDEG P Q LIENG+LKGYMQD +NARLM + TGN RRES+AH+P+
Sbjct: 335 TMMNRRGSVAIDDEGTPGQYNVLIENGVLKGYMQDKLNARLMGAAPTGNGRRESYAHLPM 394
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 395 PRMTNTYMLAGQSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTT 454
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGGT
Sbjct: 455 PVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGGT 514
>gi|62129509|gb|AAX67212.1| suppresses inhibitory activity of CsrA [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
Length = 515
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 263/480 (54%), Positives = 356/480 (74%), Gaps = 7/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L+ + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 37 LNLVSEQLLAANGLNHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 96
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QGVGVRAISG+KT F Y+D IS L + ++ R+I + NG+ K+ K + + LY
Sbjct: 97 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRE-NGEGKV-KTLAAVAHQPLY 154
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ D + S++ EK+ +L RV+K AR D RV +V A+L+G Y++IL+ DG + AD+R
Sbjct: 155 TTLDPLQSMSREEKLDILRRVDKAAREADKRVQEVNASLTGVYELILVAATDGTLAADVR 214
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L V++ VE++G+RE G SG GGR+ Y YF ++ + +V AL+NL A
Sbjct: 215 PLVRLSVSVQVEEDGKRERGASGGGGRFGYEYFLADLDGEVRADAWAKEAVRMALVNLSA 274
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG+++AS T+VD+G
Sbjct: 275 VAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQIGEQVASALCTVVDDG 334
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS+ IDDEG P Q LIENG+LKGYMQD +NARLM + TGN RRES+AH+P+
Sbjct: 335 TMMNRRGSVAIDDEGTPGQYNVLIENGVLKGYMQDKLNARLMGAAPTGNGRRESYAHLPM 394
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 395 PRMTNTYMLAGQSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTT 454
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGGT
Sbjct: 455 PVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGGT 514
>gi|145639192|ref|ZP_01794799.1| TldD [Haemophilus influenzae PittII]
gi|145271754|gb|EDK11664.1| TldD [Haemophilus influenzae PittII]
Length = 482
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 256/481 (53%), Positives = 346/481 (71%), Gaps = 5/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN + LL P +L + LL I M +DYAD YFQ +++E+W+LE+GI+K G F I
Sbjct: 2 LNQVSNTLLTPSNLSTQTLLNIFDMMSHRNIDYADLYFQLSQDESWVLEDGIIKEGGFHI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVGVRA+SG+KT F Y+D I+ +L ++ + IA G + + + Y
Sbjct: 62 DRGVGVRAVSGEKTGFAYADQINLASLQQCAEAVKGIAQVKQGNLISPSAFNVVNPIARY 121
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + S+ +KI+LL V++ AR +D RV KV A+LS Y+ +LI DG + ADIR
Sbjct: 122 AAINPLESLTKEKKIELLHLVDRTARAEDHRVTKVSASLSSVYEEVLIMATDGTLAADIR 181
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKC-----VSNSVNSALINLEA 496
PLV+L ++++VE+NG+RE G+ G GGR+ ++F ++I +V ALINL A
Sbjct: 182 PLVRLSISVLVEENGKRERGSCGSGGRFGLDWFFEVIDGDIRAVLFAKEAVRQALINLSA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS F+ IG+++ S TIVD+G
Sbjct: 242 VAAPAGLMPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSLFTGKIGEQVTSPLCTIVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS+ IDDEG P+QC LI++GIL+GYMQD MNARLM ++ TGN RRES+AH+P+
Sbjct: 302 TIENRRGSLTIDDEGVPSQCNVLIKDGILQGYMQDKMNARLMGVAPTGNGRRESYAHLPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ +++I+SVK G+YA +F GGQVDIT+GKFVFS S+AY+I+ GKIT
Sbjct: 362 PRMTNTYMLAGQSQFDDLIASVKQGIYAPHFGGGQVDITSGKFVFSTSEAYLIEKGKITK 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G +++K+SM+ + +LD G+GVCGK+GQ VPVGVGQP LKID ITVGGT
Sbjct: 422 PVKGATLIGSGIEVMQKISMVADKSELDLGIGVCGKEGQSVPVGVGQPALKIDEITVGGT 481
Query: 737 N 737
N
Sbjct: 482 N 482
>gi|359433140|ref|ZP_09223482.1| TldD protein [Pseudoalteromonas sp. BSi20652]
gi|357920173|dbj|GAA59731.1| TldD protein [Pseudoalteromonas sp. BSi20652]
Length = 479
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 264/480 (55%), Positives = 355/480 (73%), Gaps = 7/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N LL L+ + L K L + ++KVDYAD YFQ + +E+W+LE+G+VK G++++
Sbjct: 1 MNSVEQHLLHDSQLNREELEKTLAYIHQHKVDYADLYFQSSHHESWVLEDGLVKEGSYNV 60
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+GVGVRA+SG+KT F YSD I+ L A + RSIA+ G+ + IK +K+ +
Sbjct: 61 ERGVGVRAVSGEKTGFSYSDAINLEALNKAATAARSIADA--GEDRAIKVFSDVKVKEQF 118
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ ISS++ +K+ LL +E R P +VI+++S Y+ +LI +DG DIR
Sbjct: 119 APHQPISSMSDADKVSLLRELENYIRELAPDAEQVISSMSAVYEEVLIAASDGTFATDIR 178
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEK-----CVSNSVNSALINLEA 496
PL++L ++++EKNGRRE G +G G R +Y YF +++ K +V A +NLEA
Sbjct: 179 PLIRLNCSVLLEKNGRRERGGAGGGARLDYGYFKELVDGKPRWMEFAEEAVRQAKVNLEA 238
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M+VVLG GWPG+LLHEA+GHGLEGDFNRKG+SAFS +G+++AS+ T+VD+G
Sbjct: 239 IDAPAGTMEVVLGNGWPGVLLHEAVGHGLEGDFNRKGASAFSGKVGQKVASELCTVVDDG 298
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+A+RRGS+N+DDEG P LIENGILKGYMQD +NARLM +S TGNARRES+AH+P+
Sbjct: 299 TMADRRGSLNVDDEGTPAAYNVLIENGILKGYMQDKLNARLMGVSPTGNARRESYAHLPM 358
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ +IISSVK G++A NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 359 PRMTNTYMLGGEHSQADIISSVKKGVFAPNFGGGQVDITSGKFVFSASEAYLIENGKITQ 418
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG+GP +++K+SM+GND+ LD GVGVCGKDGQ VPVGVGQP+LKID +TVGGT
Sbjct: 419 PIKGATLIGNGPEVMQKISMVGNDLALDKGVGVCGKDGQSVPVGVGQPSLKIDQLTVGGT 478
>gi|90407763|ref|ZP_01215941.1| TldD protein [Psychromonas sp. CNPT3]
gi|90311123|gb|EAS39230.1| TldD protein [Psychromonas sp. CNPT3]
Length = 481
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 257/474 (54%), Positives = 353/474 (74%), Gaps = 7/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
L P L + L K L ++ K+DYAD YFQ + +E+W+LE+GIVK G+++I++GVG+R
Sbjct: 10 FLTPAQLSIEDLEKRLSHLCSAKIDYADLYFQSSCHESWLLEDGIVKNGSYNIDKGVGIR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+ G+KT F Y+D I++ +I+A + RSI +G+ K +K I + +Y ++ ++
Sbjct: 70 AVCGEKTGFAYADQITEKAIIDASNAARSIVK--SGQDKQVKLIFPQQKPLVYGISNPLN 127
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
S+ KI LL+ V+ R DP V V +L+ Y+ +LI +DG + ADIRPLV+ V
Sbjct: 128 SMAQEAKITLLKEVDVFTRALDPAVCDVTISLNSIYEEVLIAASDGTLGADIRPLVRFSV 187
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKC-----VSNSVNSALINLEAKPAPAGI 503
+++V KNG+RE G++G GGR++ YF++ + + +V+ AL N++AK +PAG+
Sbjct: 188 SVLVNKNGKREHGSAGGGGRFDLTYFSENVEGESRAFGYAKAAVHQALTNIDAKVSPAGM 247
Query: 504 MKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRG 563
M V+LG GWPGILLHEA+GHGLEGDFNRKG+S ++ IG+++AS+ TI+D+GTL N RG
Sbjct: 248 MPVILGAGWPGILLHEAVGHGLEGDFNRKGASVYAGKIGEKVASEHCTIIDDGTLKNCRG 307
Query: 564 SINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTY 623
SINIDDEG P Q LIE GILKGYMQD +NARLM + TGNARRES+AH+P+PRMTNT+
Sbjct: 308 SINIDDEGTPAQRNVLIEKGILKGYMQDKLNARLMGVEPTGNARRESYAHLPLPRMTNTF 367
Query: 624 MLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATL 683
MLNGK+ EE+I+SV+ G+Y NFSGGQVDIT+GKFVFSAS+AY+I+NGKIT P+KGATL
Sbjct: 368 MLNGKYDQEELIASVEKGIYMPNFSGGQVDITSGKFVFSASEAYLIENGKITTPIKGATL 427
Query: 684 IGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
IG+G ++++SM+ N+M LD GVGVCGK+GQ +PVGVGQP LKID ITVGGTN
Sbjct: 428 IGNGFETMQQISMVANNMCLDAGVGVCGKEGQSIPVGVGQPALKIDQITVGGTN 481
>gi|453063492|gb|EMF04471.1| protease TldD [Serratia marcescens VGH107]
Length = 481
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 259/474 (54%), Positives = 352/474 (74%), Gaps = 9/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL L + L +LG + + ++DYAD YFQ + +E W++E+GI+K G+++I+QGVGVR
Sbjct: 10 LLATNKLSHQDLYSVLGQLAERRIDYADLYFQSSYHEAWMIEDGIIKDGSYNIDQGVGVR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSLYSFTDTI 387
A+SG+KT F Y+D I+ N L + ++ RSI Q +G+ + +I +LY D +
Sbjct: 70 AVSGEKTGFAYADQITLNALQQSAQAARSIVREQGDGRAH---TLGEIGYRALYPLLDPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S+ EKI LL RV+K+AR D RV +V A+++G Y+ +L+ DG + AD+RPLV+L
Sbjct: 127 QSLPREEKIALLHRVDKVARAADARVQEVNASITGVYEQVLVAATDGTLAADVRPLVRLS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEAKPAPAG 502
V+++VE++G+RE G+SG GGR+ Y+YF D+ + +V AL+NL A APAG
Sbjct: 187 VSVLVEQDGKRERGSSGGGGRFGYDYFLETVDGDVRADAYAKEAVRMALVNLGAVAAPAG 246
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+GTL R
Sbjct: 247 NMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGHMGELVASELCTVVDDGTLQGCR 306
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+ IDDEG P Q LIENG+L+GYMQD +NARLM ++ TGN RRES+AH+P+PRMTNT
Sbjct: 307 GSLAIDDEGVPGQYNVLIENGVLRGYMQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNT 366
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML G+ PEEII+SV+ GLYA NF GGQVDIT+GKFVFS ++AY+I+ G+IT PVKGAT
Sbjct: 367 YMLAGQSTPEEIIASVEYGLYAPNFGGGQVDITSGKFVFSTTEAYLIEKGRITKPVKGAT 426
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
LIG G ++++SM+GND+ LD GVGVCGK+GQ VPVGVGQPTLK+D++TVGGT
Sbjct: 427 LIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSVPVGVGQPTLKLDTLTVGGT 480
>gi|417470075|ref|ZP_12166320.1| TldD protein [Salmonella enterica subsp. enterica serovar
Montevideo str. S5-403]
gi|417520912|ref|ZP_12182728.1| TldD protein, part of proposed TldE/TldD proteolytic complex
[Salmonella enterica subsp. enterica serovar Uganda str.
R8-3404]
gi|353626083|gb|EHC74709.1| TldD protein [Salmonella enterica subsp. enterica serovar
Montevideo str. S5-403]
gi|353642748|gb|EHC87108.1| TldD protein, part of proposed TldE/TldD proteolytic complex
[Salmonella enterica subsp. enterica serovar Uganda str.
R8-3404]
Length = 515
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 263/480 (54%), Positives = 356/480 (74%), Gaps = 7/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L+ + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 37 LNLVSEQLLAANGLNHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 96
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QGVGVRAISG+KT F Y+D IS L + ++ R+I + NG+ K+ K + + LY
Sbjct: 97 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRE-NGEGKV-KTLAAVAHQPLY 154
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ D + S++ EK+ +L RV+K AR D RV +V A+L+G Y++IL+ DG + AD+R
Sbjct: 155 TTLDPLQSMSREEKLDILRRVDKAAREADKRVQEVNASLTGVYELILVAATDGTLAADVR 214
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L V++ VE++G+RE G SG GGR+ Y YF ++ + +V AL+NL A
Sbjct: 215 PLVRLSVSVQVEEDGKRERGASGGGGRFGYEYFLADLDGEVRADAWAKEAVRMALVNLSA 274
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG+++AS T+VD+G
Sbjct: 275 VAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQIGEQVASALCTVVDDG 334
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS+ IDDEG P Q LIENG+LKGYMQD +NARLM + TGN RRES+AH+P+
Sbjct: 335 TMMNRRGSVAIDDEGTPGQYNVLIENGVLKGYMQDKLNARLMGAAPTGNGRRESYAHLPM 394
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 395 PRMTNTYMLAGQSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTT 454
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGGT
Sbjct: 455 PVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGGT 514
>gi|145634458|ref|ZP_01790168.1| TldD [Haemophilus influenzae PittAA]
gi|145268438|gb|EDK08432.1| TldD [Haemophilus influenzae PittAA]
Length = 482
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 255/481 (53%), Positives = 345/481 (71%), Gaps = 5/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN + LL P +L K LL I M +DYAD YFQ +++E+W+LE+GI+K G F I
Sbjct: 2 LNQVSNTLLTPSNLSTKTLLNIFDVMSHRNIDYADLYFQLSQDESWVLEDGIIKEGGFHI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVGVRA+SG+KT F Y+D I+ +L ++ + IA G + + + Y
Sbjct: 62 DRGVGVRAVSGEKTGFAYADQINLASLQQCAEAVKGIAQVKQGNLISPSAFNVVNPVARY 121
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + S+ +KI+LL V++ AR +D RV KV A+LS Y+ +L+ DG + ADIR
Sbjct: 122 AAINPLESLTKEKKIELLHLVDRTARAEDHRVTKVSASLSSVYEEVLVMATDGTLAADIR 181
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L ++++VE+NG+RE G+ G GGR+ ++F D+ + +V AL+NL A
Sbjct: 182 PLVRLSISVLVEENGKRERGSCGSGGRFGLDWFFEIVDGDIRAVRFAKEAVRQALVNLSA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS F+ IG+++ S TIVD+G
Sbjct: 242 IAAPAGLMPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSLFTGKIGEQVTSPLCTIVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS+ IDDEG P+QC LI+ GIL+GYMQD MNARLM ++ TGN RRES+AH+P+
Sbjct: 302 TIENRRGSLTIDDEGVPSQCNVLIKEGILQGYMQDKMNARLMGVAPTGNGRRESYAHLPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ +++I+SVK G+YA +F GGQVDIT+GKFVFS S+AY+I+ GKIT
Sbjct: 362 PRMTNTYMLAGQSQFDDLIASVKQGIYAPHFGGGQVDITSGKFVFSTSEAYLIEKGKITK 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G +++K+SM+ + +LD G+GVCGK+GQ VPVGVGQP LKID ITVGGT
Sbjct: 422 PVKGATLIGSGIEVMQKISMVADKSELDLGIGVCGKEGQSVPVGVGQPALKIDEITVGGT 481
Query: 737 N 737
N
Sbjct: 482 N 482
>gi|373468087|ref|ZP_09559370.1| TldD/PmbA family protein [Haemophilus sp. oral taxon 851 str.
F0397]
gi|371756480|gb|EHO45287.1| TldD/PmbA family protein [Haemophilus sp. oral taxon 851 str.
F0397]
Length = 482
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 253/481 (52%), Positives = 347/481 (72%), Gaps = 5/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN + LL P +L K LL I M +DYAD YFQ +++E+W+LE+GI+K G F I
Sbjct: 2 LNQVSNTLLTPSNLSTKALLNIFDMMSHRNIDYADLYFQLSQDESWVLEDGIIKEGGFHI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVGVRA+SG+KT F Y+D I+ +L ++ + IA G + + + Y
Sbjct: 62 DRGVGVRAVSGEKTGFAYADQINLASLQQCAEAVKGIAQAKQGNLISPSAFNVVNPIARY 121
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + S+ +KI+LL V++ AR +D RV +V A+LS Y+ +L+ DG + ADIR
Sbjct: 122 AAINPLESLTKEKKIELLHLVDRTARAEDHRVTRVSASLSSVYEEVLVMATDGTLAADIR 181
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLEA 496
PLV+L ++++VE+NG+RE G+ G GGR+ ++F ++I + +V AL+NL A
Sbjct: 182 PLVRLSISVLVEENGKRERGSCGSGGRFGLDWFFEVIDGDIRAVRFAKEAVRQALVNLSA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS F+ IG+++ S TIVD+G
Sbjct: 242 VAAPAGLMPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSLFTGKIGEQVTSPLCTIVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS+ IDDEG P+QC LI++GIL+GYMQD MNARLM ++ TGN RRES+AH+P+
Sbjct: 302 TIENRRGSLTIDDEGVPSQCNVLIKDGILQGYMQDKMNARLMGVAPTGNGRRESYAHLPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ +++I+SV+ G+YA +F GGQVDIT+GKFVFS S+AY+I+ GKIT
Sbjct: 362 PRMTNTYMLAGQSQFDDLIASVEQGIYAPHFGGGQVDITSGKFVFSTSEAYLIEKGKITK 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G +++K+SM+ + +LD G+GVCGK+GQ VPVGVGQP LKID ITVGGT
Sbjct: 422 PVKGATLIGSGIEVMQKISMVADKSELDLGIGVCGKEGQSVPVGVGQPALKIDEITVGGT 481
Query: 737 N 737
N
Sbjct: 482 N 482
>gi|422015692|ref|ZP_16362287.1| protease TldD [Providencia burhodogranariea DSM 19968]
gi|414097961|gb|EKT59612.1| protease TldD [Providencia burhodogranariea DSM 19968]
Length = 481
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 273/474 (57%), Positives = 355/474 (74%), Gaps = 9/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL LD + L LG + + K+DYAD YFQ + +E W+LE+ I+K G+++I+QGVGVR
Sbjct: 10 LLAANGLDHQKLYDTLGLLSERKLDYADLYFQSSYHEAWVLEDRIIKDGSYNIDQGVGVR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIAN-QSNGKIKIIKNIKKIKINSLYSFTDTI 387
A+SG+KT F Y+D +S L + ++ RSI N Q +GK +I+ I K LYS D +
Sbjct: 70 AVSGEKTGFAYADQVSLMALQQSAEAARSIVNEQGSGKSQILTEIGYKK---LYSEADPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S++ +KI LL RV++IAR +D RVI+V A+L+G Y+ IL+ DG + ADIRPLV+L
Sbjct: 127 HSLSREDKIALLHRVDQIARAEDHRVIEVNASLTGVYEQILVAATDGTLAADIRPLVRLS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYFTD-----MILEKCVSNSVNSALINLEAKPAPAG 502
V+++VE +G+RE G SG GGRY Y YF + MI E+ +V AL+NL A APAG
Sbjct: 187 VSVLVEHDGKRERGASGGGGRYGYEYFLEVHQGQMIAEQYAKEAVRMALVNLSAIAAPAG 246
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
+M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS T+VD+GT+ RR
Sbjct: 247 MMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASPLCTVVDDGTIVGRR 306
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+ IDDEG P Q LIENGILK Y+QD +NARLM ++ TGNARRES+AH+P+PRMTNT
Sbjct: 307 GSLAIDDEGVPGQYNVLIENGILKNYIQDKLNARLMGVAPTGNARRESYAHLPMPRMTNT 366
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML G PE+II+SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGKIT PVKGAT
Sbjct: 367 YMLAGTSAPEDIIASVEKGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKITSPVKGAT 426
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
LIG G ++++SM+GND+ LD GVGVCGK+GQ VPVGVGQPTLK+D +TVGGT
Sbjct: 427 LIGSGVEAMQQISMVGNDLALDNGVGVCGKEGQSVPVGVGQPTLKLDKLTVGGT 480
>gi|113971795|ref|YP_735588.1| microcin-processing peptidase 2 [Shewanella sp. MR-4]
gi|113886479|gb|ABI40531.1| microcin-processing peptidase 2. Unknown type peptidase. MEROPS
family U62 [Shewanella sp. MR-4]
Length = 497
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 264/492 (53%), Positives = 357/492 (72%), Gaps = 14/492 (2%)
Query: 254 ISQKNIHPL--NIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEE 311
+S++ P + +S+L LD L L + ++KVD++D YFQ +++E+W+LE+
Sbjct: 10 LSERTAMPFLAQVEQSLLKGGLALDG--LQSYLNTIHQHKVDFSDLYFQGSRHESWVLED 67
Query: 312 GIVKTGNFSINQGVGVRAISGDKTAFFYSDDIS-KNTLINAVKSTRSIANQSNGKIKIIK 370
GI+K G+F I +GVGVRAISG+KT F Y+DDI+ A + K++ K
Sbjct: 68 GIIKDGSFHIERGVGVRAISGEKTGFAYADDITPAALSAAAEAARGIAGAGEQAKVQAFK 127
Query: 371 NIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILIT 430
+ + +LY D I+++ +KI LL+ + R D R+I+V+ +L+G ++ IL+
Sbjct: 128 RQQAL---ALYDSLDPIAAMEEVKKINLLKEADAYIRSLDSRIIQVVISLAGVHEEILVA 184
Query: 431 RNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF--TDMI-LEKCVS--- 484
+DG + ADIRPLV+ ++I+E+NG+RE G++G GGR++Y+ F TD L C +
Sbjct: 185 ASDGTLAADIRPLVRFNCSVILEENGKRERGSAGGGGRHDYSVFMVTDETGLPMCFAFAR 244
Query: 485 NSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKR 544
+V A +NL A APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSSAFS +G++
Sbjct: 245 EAVRQAQVNLNAIDAPAGEMPVVLGNGWPGVLLHEAVGHGLEGDFNRKGSSAFSGMVGEQ 304
Query: 545 IASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITG 604
+ASK +T+VD+GTLANRRGS++IDDEG TQ T LIE+GILKGYMQD +NARLM ++ TG
Sbjct: 305 VASKLVTVVDDGTLANRRGSLSIDDEGVQTQRTVLIEDGILKGYMQDKLNARLMGVAPTG 364
Query: 605 NARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSAS 664
N RRES+AH+P+PRMTNTYM G+ P EII SVK G+YA NF GGQVDIT+GKFVFSAS
Sbjct: 365 NGRRESYAHLPMPRMTNTYMTAGESDPSEIIKSVKKGIYAPNFGGGQVDITSGKFVFSAS 424
Query: 665 KAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQP 724
+AY+I+NG++T +KGATLIG+GP + ++SM+GNDM LD GVGVCGKDGQ VPVGVGQP
Sbjct: 425 EAYLIENGEVTQAIKGATLIGNGPEAMSQISMVGNDMALDKGVGVCGKDGQSVPVGVGQP 484
Query: 725 TLKIDSITVGGT 736
TLK+D +TVGGT
Sbjct: 485 TLKLDRLTVGGT 496
>gi|320539555|ref|ZP_08039222.1| putative peptidase [Serratia symbiotica str. Tucson]
gi|320030408|gb|EFW12420.1| putative peptidase [Serratia symbiotica str. Tucson]
Length = 481
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 262/474 (55%), Positives = 351/474 (74%), Gaps = 9/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL L + L ++L + + ++DYAD YFQ + +E W++E+GI+K G+++I+QGVG+R
Sbjct: 10 LLAANKLSHQDLYQVLCQLAERRLDYADLYFQSSYHEAWMIEDGIIKDGSYNIDQGVGIR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
A+SG+KT F Y+D I+ N L + ++ RSI S NG + I + Y D +
Sbjct: 70 AVSGEKTGFAYADQITLNALQQSAQAARSIVRDSGNGWAHTLGEISH---QARYPLLDPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S++ EKI LL RV+K+AR DPRV +V AN++G Y+ +L+ DG + AD+RPLV+L
Sbjct: 127 QSLSREEKIALLHRVDKVARNTDPRVQEVSANITGIYEQMLVAATDGTLAADVRPLVRLS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLEAKPAPAG 502
V+++VE++G+RE G+SG GGR+ Y+YF + I + +V AL+NL A APAG
Sbjct: 187 VSVLVEQDGKRERGSSGGGGRFGYDYFLENIDGETRADTYAKEAVRMALVNLIAVAAPAG 246
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+R+AS+ T+VD+GTL R
Sbjct: 247 NMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGQRVASELCTVVDDGTLQGYR 306
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+ IDDEG P Q LIENGILKGYMQD +NARLM M+ TGN RRES+AH+P+PRMTNT
Sbjct: 307 GSLAIDDEGVPGQYNVLIENGILKGYMQDKLNARLMGMAPTGNGRRESYAHLPMPRMTNT 366
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML GK PEEII+ V+ GLYA NF GGQVDIT+GKFVFS ++AY+I+ G+IT PVKGAT
Sbjct: 367 YMLAGKSIPEEIIACVEYGLYAPNFGGGQVDITSGKFVFSTTEAYLIEKGRITKPVKGAT 426
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
LIG G ++++SM+GND+ LD GVGVCGK+GQ +PVG+GQPTLK+DS+TVGGT
Sbjct: 427 LIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGIGQPTLKLDSLTVGGT 480
>gi|417513854|ref|ZP_12177802.1| TldD protein [Salmonella enterica subsp. enterica serovar
Senftenberg str. A4-543]
gi|353635539|gb|EHC81820.1| TldD protein [Salmonella enterica subsp. enterica serovar
Senftenberg str. A4-543]
Length = 481
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 263/480 (54%), Positives = 355/480 (73%), Gaps = 7/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L+ + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLNHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QGVGVRAISG+KT F Y+D IS L + ++ R+I + NG+ K+ K + + LY
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRE-NGEGKV-KTLAAVAHQPLY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ D + S++ EK+ +L RV+K AR D RV +V A+L+G Y++IL+ DG + AD+R
Sbjct: 121 TTLDPLQSMSREEKLDILRRVDKAAREADKRVQEVNASLTGVYELILVAATDGTLAADVR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L V++ VE+ G+RE G SG GGR+ Y YF ++ + +V AL+NL A
Sbjct: 181 PLVRLSVSVQVEEGGKRERGASGGGGRFGYEYFLADLDGEVRADAWAKEAVRMALVNLSA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG+++AS T+VD+G
Sbjct: 241 VAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQIGEQVASALCTVVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS+ IDDEG P Q LIENG+LKGYMQD +NARLM + TGN RRES+AH+P+
Sbjct: 301 TMMNRRGSVAIDDEGTPGQYNVLIENGVLKGYMQDKLNARLMGATPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 361 PRMTNTYMLAGQSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTT 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGGT
Sbjct: 421 PVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGGT 480
>gi|56415295|ref|YP_152370.1| protease TldD [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|167552927|ref|ZP_02346678.1| protein TldD [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|197364225|ref|YP_002143862.1| protease TldD [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|417329148|ref|ZP_12114078.1| TldD protein [Salmonella enterica subsp. enterica serovar Adelaide
str. A4-669]
gi|448236293|ref|YP_001573190.2| protease TldD [Salmonella enterica subsp. arizonae serovar
62:z4,z23:- str. RSK2980]
gi|56129552|gb|AAV79058.1| TldD protein [Salmonella enterica subsp. enterica serovar Paratyphi
A str. ATCC 9150]
gi|197095702|emb|CAR61271.1| TldD protein [Salmonella enterica subsp. enterica serovar Paratyphi
A str. AKU_12601]
gi|205322509|gb|EDZ10348.1| protein TldD [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|353565762|gb|EHC31439.1| TldD protein [Salmonella enterica subsp. enterica serovar Adelaide
str. A4-669]
Length = 481
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 263/480 (54%), Positives = 356/480 (74%), Gaps = 7/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L+ + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLNHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QGVGVRAISG+KT F Y+D IS L + ++ R+I + NG+ K+ K + + LY
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIV-RDNGEGKV-KTLAAVAHQPLY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ D + S++ EK+ +L RV+K AR D RV +V A+L+G Y++IL+ DG + AD+R
Sbjct: 121 TTLDPLQSMSREEKLDILRRVDKAAREADKRVQEVNASLTGVYELILVAATDGTLAADVR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L V++ VE++G+RE G SG GGR+ Y YF ++ + +V AL+NL A
Sbjct: 181 PLVRLSVSVQVEEDGKRERGASGGGGRFGYEYFLADLDGEVRADAWAKEAVRMALVNLSA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG+++AS T+VD+G
Sbjct: 241 VAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQIGEQVASALCTVVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS+ IDDEG P Q LIENG+LKGYMQD +NARLM + TGN RRES+AH+P+
Sbjct: 301 TMMNRRGSVAIDDEGTPGQYNVLIENGVLKGYMQDKLNARLMGAAPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 361 PRMTNTYMLAGQSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTT 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGGT
Sbjct: 421 PVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGGT 480
>gi|333374732|ref|ZP_08466567.1| U62 family peptidase 2 TldD [Kingella kingae ATCC 23330]
gi|332974664|gb|EGK11581.1| U62 family peptidase 2 TldD [Kingella kingae ATCC 23330]
Length = 480
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 253/470 (53%), Positives = 347/470 (73%), Gaps = 3/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL L L K L + + VDYAD Y Q T E+W L+EG+VK+G+F I+QGVGVR
Sbjct: 12 LLHANQLSADELAKSLAIISNHHVDYADIYCQRTAFESWHLDEGMVKSGSFQIDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+ G+KTAF Y+D ++ + + A ++ + I + G I ++ + ++++ + I
Sbjct: 72 AVLGEKTAFAYADSLTADAIQRAAQTVKVIG--AAGNIAPVRVPTPVYGKAVHACANPII 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ EK+ LL++VE++A+ DPR+++V+A L+ E+D+I I R DG ADIRPLV+L V
Sbjct: 130 TLQSPEKVALLQKVEQLAKAADPRIVQVMAGLTCEHDMIYIARLDGKHAADIRPLVRLSV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVL 508
T+I ++ RRE G++G GGR++ YF D + + V+ +V ALINLE++PAPAG M VVL
Sbjct: 190 TVIAKQGERREQGSAGGGGRFDLTYFDDAKIREYVNKAVQQALINLESRPAPAGAMTVVL 249
Query: 509 GPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINID 568
G GWPG+LLHEA+GHGLEGDFNRK +S F+ IG+R+A+K +T++D G + +RRGS+NID
Sbjct: 250 GNGWPGVLLHEAVGHGLEGDFNRKQTSVFTGKIGERVAAKGVTVIDQGDIPDRRGSLNID 309
Query: 569 DEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGK 628
DEGN T+ T LIE+GIL GYMQD NARLM + +TGN RRES++ + +PRMTNT+M +G
Sbjct: 310 DEGNETRRTVLIEDGILTGYMQDETNARLMGVDVTGNGRRESYSSVVMPRMTNTFMESGT 369
Query: 629 FHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGP 688
P+EII S+ G+YA NF GGQVDIT+GKFVFSAS+A+ ++NGK+ YPVKGAT+IG G
Sbjct: 370 HDPQEIIESMDKGIYAVNFGGGQVDITSGKFVFSASEAWWVENGKLQYPVKGATIIGSGS 429
Query: 689 NILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS-ITVGGTN 737
+LK VSMIGND LD GVGVCGKDGQ VPVGVGQPTL+ID+ +TVGG+
Sbjct: 430 EVLKHVSMIGNDSALDTGVGVCGKDGQSVPVGVGQPTLRIDAGLTVGGSE 479
>gi|309750769|gb|ADO80753.1| Protease TldD [Haemophilus influenzae R2866]
Length = 482
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 256/481 (53%), Positives = 345/481 (71%), Gaps = 5/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN + LL P +L + LL I M +DYAD YFQ +++E W+LE+GI+K G F I
Sbjct: 2 LNQVSNTLLTPSNLSTQTLLNIFDMMSHRNIDYADLYFQLSQDEGWVLEDGIIKEGGFHI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVGVRA+SG+KT F Y+D I+ +L ++ + IA G + + + Y
Sbjct: 62 DRGVGVRAVSGEKTGFAYADQINLASLQQCAEAVKGIAQVKQGNLISPSAFNVVNPIARY 121
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + S+ +KI+LL V++ AR +D RV KV A+LS Y+ +LI DG + ADIR
Sbjct: 122 AAINPLESLTKEKKIELLHLVDRTARAEDHRVTKVSASLSSVYEEVLIMATDGTLAADIR 181
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKC-----VSNSVNSALINLEA 496
PLV+L ++++VE+NG+RE G+ G GGR+ ++F ++I +V ALINL A
Sbjct: 182 PLVRLSISVLVEENGKRERGSCGSGGRFGLDWFFEVIDGDIRAVLFAKEAVRQALINLSA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS F+ IG+++ S TIVD+G
Sbjct: 242 VAAPAGLMPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSLFTGKIGEQVTSPLCTIVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS+ IDDEG P+QC LI++GIL+GYMQD MNARLM ++ TGN RRES+AH+P+
Sbjct: 302 TIENRRGSLTIDDEGVPSQCNVLIKDGILQGYMQDKMNARLMGVAPTGNGRRESYAHLPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ +++I+SVK G+YA +F GGQVDIT+GKFVFS S+AY+I+ GKIT
Sbjct: 362 PRMTNTYMLAGQSQFDDLIASVKQGIYAPHFGGGQVDITSGKFVFSTSEAYLIEKGKITK 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G +++K+SM+ + +LD G+GVCGK+GQ VPVGVGQP LKID ITVGGT
Sbjct: 422 PVKGATLIGSGIEVMQKISMVADKSELDLGIGVCGKEGQSVPVGVGQPALKIDEITVGGT 481
Query: 737 N 737
N
Sbjct: 482 N 482
>gi|254448610|ref|ZP_05062069.1| TldD protein [gamma proteobacterium HTCC5015]
gi|198261799|gb|EDY86085.1| TldD protein [gamma proteobacterium HTCC5015]
Length = 485
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 271/475 (57%), Positives = 349/475 (73%), Gaps = 2/475 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+ +A+ +L+ DL L ILG + + +VDYAD YFQ E W LE+G VK G+ I
Sbjct: 11 IEVAQQRILDTADLKASHLESILGQIAQRRVDYADLYFQHCAAEGWSLEDGQVKDGSLRI 70
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QGVGVRAI+G++T F YSDD+ L +A +S R+IA + ++ + + + LY
Sbjct: 71 EQGVGVRAIAGEQTGFAYSDDLRLPALQSAAQSARAIAASGSSAVQPL--LGGSAVQPLY 128
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + S+ +K++LL+R + AR DPRV +V +L+G+Y+ +L+ DG AD+R
Sbjct: 129 AGDNPLQSLGDADKVELLKRADAAARAADPRVSQVFVSLAGKYETVLVAATDGTWSADVR 188
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPA 501
PLV+ +++IVE NGRRE G G GGR Y FT ++E +V AL+NLEA APA
Sbjct: 189 PLVRFNISVIVEDNGRREQGMMGGGGRQGYALFTGDLIESYAREAVRQALVNLEAVDAPA 248
Query: 502 GIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANR 561
G M VVLG GWPGILLHEA+GHGLEGDFNRKG+S +S IG+++AS TIVD+GTL++R
Sbjct: 249 GAMPVVLGAGWPGILLHEAVGHGLEGDFNRKGTSNYSGKIGEKVASDLCTIVDDGTLSDR 308
Query: 562 RGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTN 621
RGS+ IDDEG PTQ TTLIENG+LKGYMQD NARLM M+ TGN RRES+AH+P+PRMTN
Sbjct: 309 RGSLTIDDEGTPTQSTTLIENGVLKGYMQDKHNARLMGMAATGNGRRESYAHLPMPRMTN 368
Query: 622 TYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGA 681
TYML G+ EEII+SV GLYA NF GGQVDIT+GKFVFSAS+AY+I+NGKIT PVKGA
Sbjct: 369 TYMLPGQHQKEEIIASVDKGLYAANFGGGQVDITSGKFVFSASEAYLIENGKITRPVKGA 428
Query: 682 TLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
TLIG+G + + +VSM+G+D++LD G+G CGKDGQ VPVGVGQPTLKID ITVGGT
Sbjct: 429 TLIGNGFDTMNQVSMVGDDLELDSGIGTCGKDGQGVPVGVGQPTLKIDEITVGGT 483
>gi|160867425|gb|ABX24048.1| hypothetical protein SARI_04265 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 515
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 263/480 (54%), Positives = 356/480 (74%), Gaps = 7/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L+ + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 37 LNLVSEQLLAANGLNHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 96
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QGVGVRAISG+KT F Y+D IS L + ++ R+I + NG+ K+ K + + LY
Sbjct: 97 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIV-RDNGEGKV-KTLAAVAHQPLY 154
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ D + S++ EK+ +L RV+K AR D RV +V A+L+G Y++IL+ DG + AD+R
Sbjct: 155 TTLDPLQSMSREEKLDILRRVDKAAREADKRVQEVNASLTGVYELILVAATDGTLAADVR 214
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L V++ VE++G+RE G SG GGR+ Y YF ++ + +V AL+NL A
Sbjct: 215 PLVRLSVSVQVEEDGKRERGASGGGGRFGYEYFLADLDGEVRADAWAKEAVRMALVNLSA 274
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG+++AS T+VD+G
Sbjct: 275 VAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQIGEQVASALCTVVDDG 334
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS+ IDDEG P Q LIENG+LKGYMQD +NARLM + TGN RRES+AH+P+
Sbjct: 335 TMMNRRGSVAIDDEGTPGQYNVLIENGVLKGYMQDKLNARLMGAAPTGNGRRESYAHLPM 394
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 395 PRMTNTYMLAGQSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTT 454
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGGT
Sbjct: 455 PVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGGT 514
>gi|419839035|ref|ZP_14362453.1| TldD/PmbA family protein [Haemophilus haemolyticus HK386]
gi|386909746|gb|EIJ74410.1| TldD/PmbA family protein [Haemophilus haemolyticus HK386]
Length = 482
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 255/481 (53%), Positives = 346/481 (71%), Gaps = 5/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN + LL P +L K LL I M +DYAD YFQ +++E+W+LE+GI+K G F I
Sbjct: 2 LNQVSNTLLTPSNLSTKALLNIFDMMSHRNIDYADLYFQLSQDESWVLEDGIIKEGGFHI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVGVRA+SG+KT F YSD I+ +L + + IA G + + + Y
Sbjct: 62 DRGVGVRAVSGEKTGFAYSDQINLASLQQCAGAVKGIAQVKQGNLISPSAFNVVNPIARY 121
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + S+ +KI+LL V++ AR +D RV +V A+LS Y+ IL+ DG + ADIR
Sbjct: 122 AAINPLESLTKEKKIELLHLVDRTARAEDHRVTRVSASLSSVYEEILVMATDGTLAADIR 181
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLEA 496
PLV+L ++++VE+NG+RE G+ G GGR+ ++F ++I + +V AL+NL A
Sbjct: 182 PLVRLSISVLVEENGKRERGSCGSGGRFGLDWFFEVIDGDIRAVRFAKEAVRQALVNLSA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS F+ IG+++ S TIVD+G
Sbjct: 242 VAAPAGLMPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSLFTGKIGEQVTSPLCTIVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS+ IDDEG P+QC LI++GIL+GYMQD MNARLM ++ TGN RRES+AH+P+
Sbjct: 302 TIENRRGSLTIDDEGVPSQCNVLIKDGILQGYMQDKMNARLMGVAPTGNGRRESYAHLPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ +++I+SV+ G+YA +F GGQVDIT+GKFVFS S+AY+I+ GKIT
Sbjct: 362 PRMTNTYMLAGQSQFDDLIASVEQGIYAPHFGGGQVDITSGKFVFSTSEAYLIEKGKITK 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G +++K+SM+ + +LD G+GVCGK+GQ VPVGVGQP LKID ITVGGT
Sbjct: 422 PVKGATLIGSGIEVMQKISMVADKSELDLGIGVCGKEGQSVPVGVGQPALKIDEITVGGT 481
Query: 737 N 737
N
Sbjct: 482 N 482
>gi|343518787|ref|ZP_08755775.1| TldD/PmbA family protein [Haemophilus pittmaniae HK 85]
gi|343393366|gb|EGV05923.1| TldD/PmbA family protein [Haemophilus pittmaniae HK 85]
Length = 482
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 250/474 (52%), Positives = 343/474 (72%), Gaps = 5/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L ++ L I M +DYAD YFQ +++E+W+LE+GI+K G F I++GVGVR
Sbjct: 9 LLAPSHLVQRDLSNIFDRMSHRAIDYADLYFQLSQDESWVLEDGIIKEGGFHIDRGVGVR 68
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
AISG+KT F Y+D I +L + + IA + G++ + ++ Y+ + +
Sbjct: 69 AISGEKTGFAYADQIDLASLQQCADAAKGIAQTNQGQLLAPQAFHTVQAVPRYAALNPLL 128
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ +KI+LL V++ AR +DPRV +V A+LS Y+ IL+ DG + ADIRPLV+L +
Sbjct: 129 GLSKEKKIELLYLVDRTARAEDPRVSRVSASLSAVYEEILVAATDGTLAADIRPLVRLSI 188
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKC-----VSNSVNSALINLEAKPAPAGI 503
+++VE++G+RE G+ G GGR+ ++F D++ + +V AL+NL A APAG+
Sbjct: 189 SVLVEQDGKRERGSCGAGGRFALDWFFDVVEGEMRAVGFAKEAVRQALVNLNAVAAPAGL 248
Query: 504 MKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRG 563
M VVLG GWPG+LLHEA+GHGLEGDFNRK SS FS IG+ + S TIVD+GTL NRRG
Sbjct: 249 MPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSLFSGRIGELVTSPLCTIVDDGTLQNRRG 308
Query: 564 SINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTY 623
S+ +DDEG P+QC LI++GIL+GYMQD MNARLM ++ TGN RRES+AH+P+PRMTNTY
Sbjct: 309 SLTVDDEGVPSQCNVLIKDGILQGYMQDKMNARLMGVAPTGNGRRESYAHLPMPRMTNTY 368
Query: 624 MLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATL 683
ML G+ E++I+SV+ G+YA F GGQVDIT+GKFVFS ++AY+I+ GKIT PVKGATL
Sbjct: 369 MLAGESRFEDLIASVEQGIYAPYFGGGQVDITSGKFVFSTAEAYLIEKGKITKPVKGATL 428
Query: 684 IGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
IG G +++K+SM+ ++ +D G+GVCGK+GQ VPVGVGQP LKID ITVGGTN
Sbjct: 429 IGSGIEVMQKISMVADETSIDLGIGVCGKNGQSVPVGVGQPALKIDEITVGGTN 482
>gi|417842138|ref|ZP_12488233.1| Protein tldD [Haemophilus haemolyticus M19501]
gi|341947918|gb|EGT74559.1| Protein tldD [Haemophilus haemolyticus M19501]
Length = 482
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 253/481 (52%), Positives = 346/481 (71%), Gaps = 5/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN + LL P +L K LL I M +DYAD YFQ +++E+W+LE+GI+K G F I
Sbjct: 2 LNQVSNTLLTPSNLSTKALLNIFDMMSHRNIDYADLYFQLSQDESWVLEDGIIKEGGFHI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVG+RA+SG+KT F YSD I+ +L ++ + IA G + + + Y
Sbjct: 62 DRGVGMRAVSGEKTGFAYSDQINLASLQQCAEAVKGIAQVKQGNLISPSAFNVVNPIARY 121
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + S+ +KI+LL V++ AR +D RV +V A+LS Y+ +L+ DG + ADIR
Sbjct: 122 AAINPLESLTKEKKIELLHLVDRTARAEDHRVTRVSASLSSVYEEVLVMATDGTLAADIR 181
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLEA 496
PLV+L ++++VE+NG+RE G+ G GGR+ ++F ++I + +V AL+NL A
Sbjct: 182 PLVRLSISVLVEENGKRERGSCGSGGRFGLDWFFEVIDGDIRAVRFAKEAVRQALVNLSA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS F+ IG+++ S TIVD+G
Sbjct: 242 VAAPAGLMPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSLFTGKIGEQVTSALCTIVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS+ IDDEG P+QC LI+ GIL+GYMQD MNARLM ++ TGN RRES+AH+P+
Sbjct: 302 TIENRRGSLTIDDEGVPSQCNVLIKEGILQGYMQDKMNARLMGVAPTGNGRRESYAHLPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ +++I+SV+ G+YA +F GGQVDIT+GKFVFS S+AY+I+ GKIT
Sbjct: 362 PRMTNTYMLAGQSQFDDLIASVEQGIYAPHFGGGQVDITSGKFVFSTSEAYLIEKGKITK 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G +++K+SM+ + +LD G+GVCGK+GQ VPVGVGQP LKID ITVGGT
Sbjct: 422 PVKGATLIGSGIEVMQKISMVADKSELDLGIGVCGKEGQSVPVGVGQPALKIDEITVGGT 481
Query: 737 N 737
N
Sbjct: 482 N 482
>gi|260581248|ref|ZP_05849066.1| TldD protein [Haemophilus influenzae RdAW]
gi|260092075|gb|EEW76020.1| TldD protein [Haemophilus influenzae RdAW]
Length = 482
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 254/481 (52%), Positives = 347/481 (72%), Gaps = 5/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN + LL P +L + LL I M +DYAD YFQ +++E+W+LE+GI+K G+F I
Sbjct: 2 LNQVSNTLLTPSNLSTQTLLNIFDIMSHRNIDYADLYFQLSQDESWVLEDGIIKEGSFHI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVGVRA+SG+KT F Y+D I+ +L ++ + IA G + + + Y
Sbjct: 62 DRGVGVRAVSGEKTGFAYADQINLASLQQCAEAVKGIAQVKQGNLISPSAFNVVNPIARY 121
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + S+ +KI+LL V++ AR +D RV KV A+LS Y+ +LI DG + ADIR
Sbjct: 122 AAINPLESLTKEKKIELLHLVDRTARAEDHRVTKVSASLSSVYEEVLIMATDGTLAADIR 181
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKC-----VSNSVNSALINLEA 496
PLV+L ++++VE+NG+RE G+ G GGR+ ++F +++ +V AL+NL A
Sbjct: 182 PLVRLSISVLVEENGKRERGSCGSGGRFGLDWFFEVVDGDIRAVLFAKEAVRQALVNLSA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS F+ IG+++ S TIVD+G
Sbjct: 242 VAAPAGLMPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSLFTGKIGEQVTSPLCTIVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS+ IDDEG P+QC LI++GIL+GYMQD MNARLM ++ TGN RRES+AH+P+
Sbjct: 302 TIENRRGSLTIDDEGVPSQCNVLIKDGILQGYMQDKMNARLMGVAPTGNGRRESYAHLPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ +++I+SVK G+YA +F GGQVDIT+GKFVFS S+AY+I+ GKIT
Sbjct: 362 PRMTNTYMLAGQSQFDDLIASVKQGIYAPHFGGGQVDITSGKFVFSTSEAYLIEKGKITK 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G +++K+SM+ + +LD G+GVCGK+GQ VPVGVGQP LKID ITVGGT
Sbjct: 422 PVKGATLIGSGIEVMQKISMVADKSELDLGIGVCGKEGQSVPVGVGQPALKIDEITVGGT 481
Query: 737 N 737
N
Sbjct: 482 N 482
>gi|212711068|ref|ZP_03319196.1| hypothetical protein PROVALCAL_02137 [Providencia alcalifaciens DSM
30120]
gi|212686236|gb|EEB45764.1| hypothetical protein PROVALCAL_02137 [Providencia alcalifaciens DSM
30120]
Length = 481
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 270/474 (56%), Positives = 357/474 (75%), Gaps = 9/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL L + L ILG + + +VDY D +FQ + +E+W+LE+ I+K G+++I+QGVGVR
Sbjct: 10 LLAANGLSQDNLYDILGLLSERRVDYGDLFFQSSYHESWVLEDRIIKDGSYNIDQGVGVR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSI-ANQSNGKIKIIKNIKKIKINSLYSFTDTI 387
AI+G+KT F Y+D IS L + + RSI Q +GK +I+ N+ K LYS D +
Sbjct: 70 AITGEKTGFAYADQISLLALTQSATAARSIVTEQGSGKSQILTNVDYKK---LYSDADPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S+ +KI+LL RV+++AR +DPRVI+V A+L+G Y+ +L+ DG + ADIRPLV+L
Sbjct: 127 RSLPREQKIELLHRVDQVARAEDPRVIEVNASLTGVYEQVLVAATDGTLAADIRPLVRLS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYFTDM-----ILEKCVSNSVNSALINLEAKPAPAG 502
V+++VE +G+RE G SG GGRY Y YF ++ + E+ +V AL+NL A APAG
Sbjct: 187 VSVLVEHDGKRERGASGGGGRYGYEYFLEIHQGQVLAEQYAREAVRMALVNLSAIAAPAG 246
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
+M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+++AS T+VD+GT+A RR
Sbjct: 247 MMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGKMGEQVASSLCTVVDDGTIAGRR 306
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+ IDDEG P Q LIENGIL+ Y+QD NARLM ++ TGNARRES+AH+P+PRMTNT
Sbjct: 307 GSLAIDDEGVPGQYNVLIENGILRNYIQDKHNARLMGVAPTGNARRESYAHLPMPRMTNT 366
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML G+ PEEII+SV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+NGKIT PVKGAT
Sbjct: 367 YMLAGESTPEEIIASVEKGLYAPNFGGGQVDITSGKFVFSTSEAYLIENGKITSPVKGAT 426
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
LIG G ++++SM+GND+ LD GVGVCGK+GQ VPVGVGQPTLK+D +TVGGT
Sbjct: 427 LIGSGVEAMQQISMVGNDLALDKGVGVCGKEGQSVPVGVGQPTLKLDKMTVGGT 480
>gi|149910587|ref|ZP_01899225.1| TldD protein [Moritella sp. PE36]
gi|149806315|gb|EDM66290.1| TldD protein [Moritella sp. PE36]
Length = 482
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 274/479 (57%), Positives = 359/479 (74%), Gaps = 8/479 (1%)
Query: 263 NIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSIN 322
+ SILL P DL+ L L + N++DY D YFQ K+E+W LE+GIVK G+F+I
Sbjct: 5 QVENSILL-PADLNLDKLQNTLSLLMGNQLDYGDLYFQACKHESWGLEDGIVKEGSFNIE 63
Query: 323 QGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYS 382
+GVGVRA+SG+KT F YSD+IS N L + K+ R IA S G+ K+ K K + + +Y
Sbjct: 64 KGVGVRAVSGEKTGFAYSDEISLNALTQSAKAARGIA-ASGGQGKV-KAWSKPQGSEIYQ 121
Query: 383 FTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRP 442
D ++S+ + KI LL V+ AR D V +V +LS Y+ IL+ DG + D+RP
Sbjct: 122 PLDPLTSMERQRKIDLLHEVDVYARSLDTHVTQVSVSLSAVYEEILVAATDGTLATDVRP 181
Query: 443 LVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI--LEKCVS---NSVNSALINLEAK 497
LV++ ++++EKNG+RE G +G GGRY ++YF D + ++ S ++V AL+N++A
Sbjct: 182 LVRMNCSVLIEKNGKRERGGAGGGGRYGFDYFLDDVDGTQRAFSYAKDAVRQALVNIDAI 241
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
APAG M+VVLG GWPG+LLHEA+GHGLEGDFNRKG+S+++ IG+++AS TIVDNGT
Sbjct: 242 DAPAGAMEVVLGAGWPGVLLHEAVGHGLEGDFNRKGTSSYAGKIGEKVASPLCTIVDNGT 301
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
LANRRGS+NIDDEG TQ T LIE GILKGYMQD +NARLM + TGN RRESFAH+P+P
Sbjct: 302 LANRRGSLNIDDEGTVTQNTMLIEKGILKGYMQDKLNARLMGVESTGNGRRESFAHLPMP 361
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNTYML G+ PEEIIS+VK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NGKIT P
Sbjct: 362 RMTNTYMLAGEHSPEEIISTVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIENGKITTP 421
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
+KGATLIG+G ++ +SM+GND++LD GVG+CGK+GQ +PVGVGQPTLK+DS+TVGGT
Sbjct: 422 IKGATLIGNGHEAMQHISMVGNDLELDKGVGICGKEGQSIPVGVGQPTLKLDSMTVGGT 480
>gi|445019978|ref|ZP_21335940.1| modulator of DNA gyrase family protein [Escherichia coli PA8]
gi|444628353|gb|ELW02097.1| modulator of DNA gyrase family protein [Escherichia coli PA8]
Length = 459
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 258/460 (56%), Positives = 352/460 (76%), Gaps = 9/460 (1%)
Query: 283 ILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDD 342
ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I+QGVGVRAISG+KT F Y+D
Sbjct: 2 ILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNIDQGVGVRAISGEKTGFAYADQ 61
Query: 343 ISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLER 401
IS L + ++ R+IA S +GK++ + ++ + LY+ D + S++ EK+ +L R
Sbjct: 62 ISLLALEQSAQAARTIARDSGDGKVQTLGAVEH---SPLYTSVDPLQSMSREEKLDILRR 118
Query: 402 VEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIG 461
V+K+AR D RV +V A+LSG Y++IL+ DG + AD+RPLV+L V++++E++G+RE G
Sbjct: 119 VDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADVRPLVRLSVSVLIEEDGKRERG 178
Query: 462 NSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGIL 516
SG GGR+ Y +F ++ + +V AL+NL A APAG M VVLG GWPG+L
Sbjct: 179 ASGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLSAVAAPAGTMPVVLGAGWPGVL 238
Query: 517 LHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQC 576
LHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+GT+ +RRGS+ IDDEG P Q
Sbjct: 239 LHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDDGTMVDRRGSVAIDDEGTPGQY 298
Query: 577 TTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIIS 636
LIENGILKGYMQD +NARLM M+ TGN RRES+AH+P+PRMTNTYML GK P+EII
Sbjct: 299 NVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLPMPRMTNTYMLPGKSTPQEIIE 358
Query: 637 SVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSM 696
SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T PVKGATLIG G ++++SM
Sbjct: 359 SVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTKPVKGATLIGSGIETMQQISM 418
Query: 697 IGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGGT
Sbjct: 419 VGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGGT 458
>gi|302185324|ref|ZP_07261997.1| peptidase U62, modulator of DNA gyrase [Pseudomonas syringae pv.
syringae 642]
gi|422671937|ref|ZP_16731302.1| peptidase U62, modulator of DNA gyrase [Pseudomonas syringae pv.
aceris str. M302273]
gi|440742378|ref|ZP_20921703.1| C69 family peptidase [Pseudomonas syringae BRIP39023]
gi|330969676|gb|EGH69742.1| peptidase U62, modulator of DNA gyrase [Pseudomonas syringae pv.
aceris str. M302273]
gi|440377215|gb|ELQ13864.1| C69 family peptidase [Pseudomonas syringae BRIP39023]
Length = 479
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 264/471 (56%), Positives = 350/471 (74%), Gaps = 5/471 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L+ L +LG++ +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 11 LLAPGGLNLDSLQSVLGDLAGPGIDAADLYFQGMISESWSLEDGIVKEGSFNLDQGVGVR 70
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
A SG+KT F YS+ I+ L A ++ RSI+ NG+++ + + LY+ + +
Sbjct: 71 AQSGEKTGFAYSNAITAEALRTAAQAARSISRAGQNGRVQAFTSQD---VAQLYAPDNPL 127
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
++ EK++LL+R++ R D R+ +V +++G ++ IL+ DG + AD+RPLV+
Sbjct: 128 EVLSRAEKVELLKRIDVATRALDSRIQQVSVSMAGVWERILVAAADGSLAADVRPLVRFN 187
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKV 506
V++IVE+NGRRE G G GGR +Y YF TD ++ AL+NLEA PAPAG + V
Sbjct: 188 VSVIVEQNGRRERGGHGGGGRTDYRYFLTDDRAMGYAREALRQALVNLEAIPAPAGTLPV 247
Query: 507 VLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSIN 566
VLG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+GTLA RRGS++
Sbjct: 248 VLGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGTLAGRRGSLS 307
Query: 567 IDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLN 626
+DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML
Sbjct: 308 VDDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYMLG 367
Query: 627 GKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGH 686
G+ P+EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+
Sbjct: 368 GQSDPQEIIASVKRGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGN 427
Query: 687 GPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
GP + +VSM+GND+ LD GVG CGKDGQ +PVGVGQPTLKID+ITVGGT
Sbjct: 428 GPEAMSRVSMVGNDLSLDSGVGTCGKDGQSLPVGVGQPTLKIDAITVGGTG 478
>gi|417683803|ref|ZP_12333146.1| modulator of DNA gyrase family protein [Shigella boydii 3594-74]
gi|332090897|gb|EGI95988.1| modulator of DNA gyrase family protein [Shigella boydii 3594-74]
Length = 472
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 260/474 (54%), Positives = 355/474 (74%), Gaps = 9/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
+L L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I+QGVGVR
Sbjct: 1 MLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNIDQGVGVR 60
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
AISG+KT F Y+D IS L + ++ R+I S +GK++ + + + LY+ D +
Sbjct: 61 AISGEKTGFAYADQISLLALEQSAQAARTIVRDSGDGKVQTLGAVGH---SPLYTSVDPL 117
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+RPLV+L
Sbjct: 118 QSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADVRPLVRLS 177
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEAKPAPAG 502
V+++VE++G+RE G SG GGR+ Y +F ++ + +V AL+NL A APAG
Sbjct: 178 VSVLVEEDGKRERGASGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLSAVAAPAG 237
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+GT+ +RR
Sbjct: 238 TMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDDGTMVDRR 297
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+ IDDEG P Q LIENGILKGYMQD +NARLM M+ TGN RRES+AH+P+PRMTNT
Sbjct: 298 GSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLPMPRMTNT 357
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML GK P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T PV+GAT
Sbjct: 358 YMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTKPVRGAT 417
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
LIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGGT
Sbjct: 418 LIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGGT 471
>gi|421448815|ref|ZP_15898203.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|396071807|gb|EJI80125.1| protease TldD [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
Length = 481
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 262/480 (54%), Positives = 356/480 (74%), Gaps = 7/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L+ + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLNHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QGVGVRAISG+KT F Y+D IS L + ++ R+I + NG+ K+ K + + LY
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRE-NGEGKV-KTLAAVAHQPLY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ D + S++ EK+ +L RV+K+AR D RV +V A+L+G Y++IL+ DG + AD+R
Sbjct: 121 TTLDPLQSMSREEKLDILRRVDKVAREADKRVQEVNASLTGVYELILVAATDGTLAADVR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L V++ VE++G+RE G SG GGR+ Y YF ++ + +V AL+NL A
Sbjct: 181 PLVRLSVSVQVEEDGKRERGASGGGGRFGYEYFLADLDGEVRADAWAKEAVRMALVNLSA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG+++AS T+VD+G
Sbjct: 241 VAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQIGEQVASALCTVVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NR GS+ IDDEG P Q LIENG+LKGYMQD +NARLM + TGN RRES+AH+P+
Sbjct: 301 TMMNRLGSVAIDDEGTPGQYNVLIENGVLKGYMQDKLNARLMGAAPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 361 PRMTNTYMLAGQSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTT 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGGT
Sbjct: 421 PVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGGT 480
>gi|187730693|ref|YP_001881635.1| protease TldD [Shigella boydii CDC 3083-94]
gi|187427685|gb|ACD06959.1| protein TldD [Shigella boydii CDC 3083-94]
Length = 481
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 262/481 (54%), Positives = 357/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRAISG+KT F Y+D IS L + ++ R+I S +GK++ + + + L
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRDSGDGKVQTLGAVGH---SPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE++G+RE G G GGR+ Y +F ++ + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEEDGKRERGAGGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM M+ TGN RRES+AH+P
Sbjct: 300 GTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PV+GATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KPVRGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|419953420|ref|ZP_14469565.1| peptidase U62, modulator of DNA gyrase [Pseudomonas stutzeri TS44]
gi|387970012|gb|EIK54292.1| peptidase U62, modulator of DNA gyrase [Pseudomonas stutzeri TS44]
Length = 480
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 268/470 (57%), Positives = 350/470 (74%), Gaps = 3/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L L +LG + +D AD YFQ +E+W+LE+GIVK G F + QGVGVR
Sbjct: 12 LLTPGGLGADDLPALLGELAGPGIDAADLYFQDQVSESWVLEDGIVKEGGFHLEQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+SG+KT F YS+ I+ L A ++ RSIA +G+ ++ + K LYS + +
Sbjct: 72 ALSGEKTGFAYSNAITAEALRQAAQAARSIAR--SGQPGSVQVLSKAAFAPLYSQDNPLD 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ EK++LL+R++ R DPR+ +V +L+G ++ IL+ DG + AD+RPLV+ V
Sbjct: 130 GLSRAEKVELLKRIDVATRALDPRIKQVTVSLAGVWEHILVAGMDGGMAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
++IVE+NGRRE G G GGR Y YF ++ ++ AL+NLEA+PAPAG + VV
Sbjct: 190 SVIVEQNGRRERGGQGGGGRLGYQYFLSEDRAMGYAREALRQALVNLEAQPAPAGSLPVV 249
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LGPGW G+LLHEA+GHGLEGDFNRKGSSA+S IG+++ASK TIVD+GTLA+RRGS+++
Sbjct: 250 LGPGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRIGQQVASKLCTIVDDGTLADRRGSLSV 309
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PTQCTTLIENG+LKGY+QD +NARLM ++ TGN RRES+AH+P+PRMTNTYML G
Sbjct: 310 DDEGTPTQCTTLIENGVLKGYIQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNTYMLAG 369
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ PEEII SVK G+Y + GGQVDIT+GKFVFS S+AY+I++G+IT PVKGATLIG+G
Sbjct: 370 QSDPEEIIRSVKRGIYCASLGGGQVDITSGKFVFSTSEAYLIEDGRITAPVKGATLIGNG 429
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
P ++ +VSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID ITVGGT
Sbjct: 430 PEVMTRVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKIDEITVGGTG 479
>gi|387887690|ref|YP_006317988.1| protein TldD [Escherichia blattae DSM 4481]
gi|414594290|ref|ZP_11443929.1| TldD protein [Escherichia blattae NBRC 105725]
gi|386922523|gb|AFJ45477.1| protein TldD [Escherichia blattae DSM 4481]
gi|403194880|dbj|GAB81581.1| TldD protein [Escherichia blattae NBRC 105725]
Length = 482
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 260/482 (53%), Positives = 356/482 (73%), Gaps = 10/482 (2%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L+ + L ILG + + ++DY D YFQ + +E+W+LE+ IVK G+++I
Sbjct: 3 LNLVSEQLLAANGLNHQDLFAILGQLSERRLDYGDLYFQSSYHESWVLEDRIVKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSL 380
+QGVG+RA++G+KT F Y+D IS L + + RSI Q +GK + + + + L
Sbjct: 63 DQGVGIRAVNGEKTGFAYADQISLQALQQSAHAARSIVREQGDGKTRTLGAVAH---SPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S+ K+ +L+R++ +AR DPRV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YAAVDPLQSMGREAKLDILKRIDSVARGADPRVQEVTASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI------LEKCVSNSVNSALINL 494
RPLV+L V+++VE++G+RE G SG GGR+ Y +F + ++ +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEQDGKRERGTSGGGGRFGYEWFLQPMEDGESRVDTWAREAVRMALVNL 239
Query: 495 EAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVD 554
A APAG++ VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD
Sbjct: 240 SAVAAPAGMLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGQLVASELCTVVD 299
Query: 555 NGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHI 614
+GT+A+RRGS+ IDDEG P Q LIENGILKG+MQD +NARLM +S TGN RRES+AH+
Sbjct: 300 DGTIADRRGSVAIDDEGVPGQYNVLIENGILKGFMQDKLNARLMGLSPTGNGRRESYAHL 359
Query: 615 PIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKI 674
P+PRMTNTYML GK P+EII SV G+YA NF GGQVDIT+GKFVFS S+AY+I+ GKI
Sbjct: 360 PMPRMTNTYMLAGKSTPQEIIESVDYGIYAPNFGGGQVDITSGKFVFSTSEAYLIEKGKI 419
Query: 675 TYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVG 734
T PVKGATLIG G ++++SM+GND++LD GVGVCGK+GQ VPVGVGQPTLK+D++TVG
Sbjct: 420 TTPVKGATLIGSGIETMQQISMVGNDLRLDSGVGVCGKEGQSVPVGVGQPTLKVDNLTVG 479
Query: 735 GT 736
GT
Sbjct: 480 GT 481
>gi|378697895|ref|YP_005179853.1| peptidase [Haemophilus influenzae 10810]
gi|301170411|emb|CBW30017.1| predicted peptidase [Haemophilus influenzae 10810]
Length = 482
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 254/481 (52%), Positives = 346/481 (71%), Gaps = 5/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN + LL P +L + LL I M +DYAD YFQ +++E+W+LE+GI+K G F I
Sbjct: 2 LNQVSNTLLTPSNLSTQTLLNIFDIMSHRNIDYADLYFQLSQDESWVLEDGIIKEGGFHI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVGVRA+SG+KT F Y+D I+ +L ++ + IA G + + + Y
Sbjct: 62 DRGVGVRAVSGEKTGFAYADQINLASLQQCAEAVKGIAQVKQGNLISPSAFNVVNPIARY 121
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + S+ +KI+LL V++ AR +D RV KV A+LS Y+ +LI DG + ADIR
Sbjct: 122 AAINPLESLTKEKKIELLHLVDRTARAEDHRVTKVSASLSSVYEEVLIMATDGTLAADIR 181
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKC-----VSNSVNSALINLEA 496
PLV+L ++++VE+NG+RE G+ G GGR+ ++F +++ +V AL+NL A
Sbjct: 182 PLVRLSISVLVEENGKRERGSCGSGGRFGLDWFFEVVDGDIRAVLFAKEAVRQALVNLSA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS F+ IG+++ S TIVD+G
Sbjct: 242 VAAPAGLMPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSLFTGKIGEQVTSPLCTIVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS+ IDDEG P+QC LI++GIL+GYMQD MNARLM ++ TGN RRES+AH+P+
Sbjct: 302 TIENRRGSLTIDDEGVPSQCNVLIKDGILQGYMQDKMNARLMGVAPTGNGRRESYAHLPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ +++I+SVK G+YA +F GGQVDIT+GKFVFS S+AY+I+ GKIT
Sbjct: 362 PRMTNTYMLAGQSQFDDLIASVKQGIYAPHFGGGQVDITSGKFVFSTSEAYLIEKGKITK 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G +++K+SM+ + +LD G+GVCGK+GQ VPVGVGQP LKID ITVGGT
Sbjct: 422 PVKGATLIGSGIEVMQKISMVADKSELDLGIGVCGKEGQSVPVGVGQPALKIDEITVGGT 481
Query: 737 N 737
N
Sbjct: 482 N 482
>gi|145631498|ref|ZP_01787267.1| TldD [Haemophilus influenzae R3021]
gi|144982928|gb|EDJ90441.1| TldD [Haemophilus influenzae R3021]
Length = 482
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 254/481 (52%), Positives = 346/481 (71%), Gaps = 5/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN + LL P +L K LL I M +DYAD YFQ +++E+W+LE+GI+K G F I
Sbjct: 2 LNQVSNTLLTPSNLSTKTLLNIFDVMSHRNIDYADLYFQLSQDESWVLEDGIIKEGGFHI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVGVRA+SG+KT F Y+D I+ +L ++ + IA G + + + Y
Sbjct: 62 DRGVGVRAVSGEKTGFAYADQINLASLQQCAEAVKGIAQVKQGNLISPSAFNVVNPIARY 121
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + S+ +KI+LL V++ AR +D V KV A+LS Y+ +L+ DG + ADIR
Sbjct: 122 AAINPLESLTKEKKIELLHLVDRTARAEDHSVTKVSASLSSVYEEVLVMATDGTLAADIR 181
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLEA 496
PLV+L ++++VE+NG+RE G+ G GGR+ ++F ++I + +V AL+NL A
Sbjct: 182 PLVRLSISVLVEENGKRERGSCGSGGRFGLDWFFEVIDGDIRAVRFAKEAVRQALVNLSA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS F+ IG+++ S TIVD+G
Sbjct: 242 IAAPAGLMPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSLFTGKIGEQVTSPLCTIVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS+ IDDEG P+QC LI++GIL+GYMQD MNARLM +S TGN RRES+AH+P+
Sbjct: 302 TIENRRGSLTIDDEGVPSQCNVLIKDGILQGYMQDKMNARLMGVSPTGNGRRESYAHLPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ H +++I+SV+ G+YA +F GGQVDIT+GKFVFS S+AY+I+ GKI
Sbjct: 362 PRMTNTYMLAGQSHFDDLIASVEQGIYAPHFGGGQVDITSGKFVFSTSEAYLIEKGKIMK 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G +++K+SM+ + +LD G+GVCGK+GQ VPVGVGQP LKID ITVGGT
Sbjct: 422 PVKGATLIGSGIEVMQKISMVADKSELDLGIGVCGKEGQSVPVGVGQPALKIDEITVGGT 481
Query: 737 N 737
N
Sbjct: 482 N 482
>gi|374705521|ref|ZP_09712391.1| peptidase U62, modulator of DNA gyrase [Pseudomonas sp. S9]
Length = 480
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 265/471 (56%), Positives = 345/471 (73%), Gaps = 5/471 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L L +LG + +D AD YFQ +E W+LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLSPGGLTIDSLPGVLGELAGPGIDAADLYFQSQVSETWVLEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ L A + RSIA +G+ ++ + +LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAITAEALSQAALAARSIAR--SGQNGCVRAFSATDVTALYAPNNPLD 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ EK++LL++V++ R D R+ +V +L+G +D +++ DG + ADIRPLV+ V
Sbjct: 130 VMSRAEKVELLKQVDQATRALDSRIKQVTVSLAGVWDRVMVASTDGALGADIRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF--TDMILEKCVSNSVNSALINLEAKPAPAGIMKV 506
++IVE+NGRRE G G GGR +Y YF D + ++ AL+NLEA APAG M V
Sbjct: 190 SVIVEQNGRRERGGHGGGGRTDYRYFLNEDRAM-GYAREALRQALVNLEAIAAPAGSMPV 248
Query: 507 VLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSIN 566
V+G GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+++AS TIVD+GTLA RRGS++
Sbjct: 249 VMGAGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEKVASSLCTIVDDGTLAERRGSLS 308
Query: 567 IDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLN 626
+DDEG PTQCTTLIENG+LKGYMQD +NARLM + TGN RRES+AH+P+PRMTNTYML
Sbjct: 309 MDDEGTPTQCTTLIENGVLKGYMQDKLNARLMGVRATGNGRRESYAHLPMPRMTNTYMLA 368
Query: 627 GKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGH 686
G+ P+EII SVK GLY N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+
Sbjct: 369 GESDPQEIIRSVKKGLYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGN 428
Query: 687 GPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
GP + +VSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 429 GPEAMSRVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|145633328|ref|ZP_01789059.1| TldD [Haemophilus influenzae 3655]
gi|229845061|ref|ZP_04465197.1| TldD [Haemophilus influenzae 6P18H1]
gi|144986174|gb|EDJ92764.1| TldD [Haemophilus influenzae 3655]
gi|229812033|gb|EEP47726.1| TldD [Haemophilus influenzae 6P18H1]
Length = 482
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 254/481 (52%), Positives = 346/481 (71%), Gaps = 5/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN + LL P +L + LL I M +DYAD YFQ +++E+W+LE+GI+K G F I
Sbjct: 2 LNQVSNTLLTPSNLSTQTLLNIFDIMSHRNIDYADLYFQLSQDESWVLEDGIIKEGGFHI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVGVRA+SG+KT F Y+D I+ +L ++ + IA G + + + Y
Sbjct: 62 DRGVGVRAVSGEKTGFAYADQINLASLQQCAEAVKGIAQVKQGNLISPSAFNVVNPIARY 121
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + S+ +KI+LL V++ AR +D RV KV A+LS Y+ +LI DG + ADIR
Sbjct: 122 AAINPLESLTKEKKIELLHLVDRTARAEDHRVTKVSASLSSVYEEVLIMATDGTLAADIR 181
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKC-----VSNSVNSALINLEA 496
PLV+L ++++VE+NG+RE G+ G GGR+ ++F +++ +V AL+NL A
Sbjct: 182 PLVRLSISVLVEENGKRERGSCGSGGRFGLDWFFEVVDGDIRAVLFAKEAVRQALVNLSA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS F+ IG+++ S TIVD+G
Sbjct: 242 VAAPAGLMPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSLFTGKIGEQVTSPLCTIVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS+ IDDEG P+QC LI++GIL+GYMQD MNARLM ++ TGN RRES+AH+P+
Sbjct: 302 TIENRRGSLTIDDEGVPSQCNVLIKDGILQGYMQDKMNARLMGVAPTGNGRRESYAHLPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ +++I+SVK G+YA +F GGQVDIT+GKFVFS S+AY+I+ GKIT
Sbjct: 362 PRMTNTYMLAGQSQFDDLIASVKQGVYAPHFGGGQVDITSGKFVFSTSEAYLIEKGKITK 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G +++K+SM+ + +LD G+GVCGK+GQ VPVGVGQP LKID ITVGGT
Sbjct: 422 PVKGATLIGSGIEVMQKISMVADKSELDLGIGVCGKEGQSVPVGVGQPALKIDEITVGGT 481
Query: 737 N 737
N
Sbjct: 482 N 482
>gi|117922075|ref|YP_871267.1| microcin-processing peptidase 2 [Shewanella sp. ANA-3]
gi|117614407|gb|ABK49861.1| microcin-processing peptidase 2. Unknown type peptidase. MEROPS
family U62 [Shewanella sp. ANA-3]
Length = 497
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 264/492 (53%), Positives = 356/492 (72%), Gaps = 14/492 (2%)
Query: 254 ISQKNIHPL--NIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEE 311
+S++ P + +S+L LD L L + ++KVD++D YFQ +++E+W+LE+
Sbjct: 10 LSERTAMPFLAQVEQSLLKGGLALDG--LQSYLNTIHQHKVDFSDLYFQGSRHESWVLED 67
Query: 312 GIVKTGNFSINQGVGVRAISGDKTAFFYSDDIS-KNTLINAVKSTRSIANQSNGKIKIIK 370
GI+K G+F I +GVGVRAISG+KT F Y+DDI+ A + K++ K
Sbjct: 68 GIIKDGSFHIERGVGVRAISGEKTGFAYADDITPAALSAAAEAARGIAGAGEQAKVQAFK 127
Query: 371 NIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILIT 430
+ + LY D I+++ +KI LL+ + R D R+I+V+ +L+G ++ IL+
Sbjct: 128 RQQAL---VLYDSLDPIAAMEEVKKINLLKEADAYIRSLDSRIIQVVISLAGVHEEILVA 184
Query: 431 RNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF--TDMI-LEKCVS--- 484
+DG + ADIRPLV+ ++I+E+NG+RE G++G GGR++Y+ F TD L C +
Sbjct: 185 ASDGTLAADIRPLVRFNCSVILEENGKRERGSAGGGGRHDYSVFMVTDETGLPMCFAFAR 244
Query: 485 NSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKR 544
+V A +NL A APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSSAFS +G++
Sbjct: 245 EAVRQAQVNLNAIDAPAGEMPVVLGNGWPGVLLHEAVGHGLEGDFNRKGSSAFSGMVGEQ 304
Query: 545 IASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITG 604
+ASK +T+VD+GTLANRRGS++IDDEG TQ T LIE+GILKGYMQD +NARLM ++ TG
Sbjct: 305 VASKLVTVVDDGTLANRRGSLSIDDEGVQTQRTVLIEDGILKGYMQDKLNARLMGVAPTG 364
Query: 605 NARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSAS 664
N RRES+AH+P+PRMTNTYM G+ P EII SVK G+YA NF GGQVDIT+GKFVFSAS
Sbjct: 365 NGRRESYAHLPMPRMTNTYMTAGESDPSEIIKSVKKGIYAPNFGGGQVDITSGKFVFSAS 424
Query: 665 KAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQP 724
+AY+I+NG++T +KGATLIG+GP + ++SM+GNDM LD GVGVCGKDGQ VPVGVGQP
Sbjct: 425 EAYLIENGEVTQAIKGATLIGNGPEAMSQISMVGNDMALDKGVGVCGKDGQSVPVGVGQP 484
Query: 725 TLKIDSITVGGT 736
TLK+D +TVGGT
Sbjct: 485 TLKLDRLTVGGT 496
>gi|418021673|ref|ZP_12660712.1| putative Zn-dependent protease [Candidatus Regiella insecticola
R5.15]
gi|347602985|gb|EGY27911.1| putative Zn-dependent protease [Candidatus Regiella insecticola
R5.15]
Length = 482
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 266/474 (56%), Positives = 348/474 (73%), Gaps = 8/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L + L +L + + +DYAD YFQ + +E W+LE+ ++K G++ I+QGVGVR
Sbjct: 10 LLTPNKLTHQDLFSVLSQLTERALDYADLYFQSSYHEAWVLEDRLIKEGSYHIDQGVGVR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
AISG+KT F Y+D I+ L + ++ RSI + NG +I ++++ S Y D ++
Sbjct: 70 AISGEKTGFAYADQITLKALQQSAQAARSIVKE-NGTSQI-PLLREVSYPSRYPSLDPLT 127
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
+ + +KIKLL RV+++AR D RV +V A+L+G Y++ILI DG + AD+RPLV+L V
Sbjct: 128 NYDCEKKIKLLHRVDEVARAVDERVKEVTASLTGVYELILIAATDGTLAADVRPLVRLSV 187
Query: 449 TIIVEK-NGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLEAKPAPAG 502
++VE NG+RE G+ G GGR +Y+YF + + + +V AL+NL+A APAG
Sbjct: 188 NVLVEDTNGKRERGSCGGGGRCDYDYFFESVDGEERADTFAKEAVRIALVNLDAVAAPAG 247
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
M VVLG GWPG+LLHEA+GHGLEGDFNR+GSS FS IG+ + S+ T+VDNGTL+N R
Sbjct: 248 TMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGSSVFSGKIGEMVTSELCTVVDNGTLSNLR 307
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+ IDDEG P Q LIENGILKGYMQD +NARLM M TGN RRES+AH+P+PRMTNT
Sbjct: 308 GSLAIDDEGVPGQRNILIENGILKGYMQDKLNARLMGMEATGNGRRESYAHLPMPRMTNT 367
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML G+ PEEII SVK GLYA NFSGGQVDIT+GKFVFS S+AY+I+NGK T VKGAT
Sbjct: 368 YMLAGRSTPEEIIESVKYGLYAPNFSGGQVDITSGKFVFSTSEAYLIENGKKTKAVKGAT 427
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
LIG G ++++SM+GND+ D G+GVCGKDGQ VPVGVGQPTLK+D++TVGGT
Sbjct: 428 LIGSGIEAMQQISMVGNDLAFDKGIGVCGKDGQSVPVGVGQPTLKLDNLTVGGT 481
>gi|253686663|ref|YP_003015853.1| peptidase U62 modulator of DNA gyrase [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251753241|gb|ACT11317.1| peptidase U62 modulator of DNA gyrase [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 481
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 253/469 (53%), Positives = 350/469 (74%), Gaps = 9/469 (1%)
Query: 273 FDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISG 332
+LD+ L +LG++ + ++DYAD YFQ + +E+W+LE+ I+K G+++I+QGVG+RAI G
Sbjct: 16 LNLDD--LAAVLGSLNERRLDYADLYFQSSYHESWVLEDRIIKDGSYNIDQGVGIRAIDG 73
Query: 333 DKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINI 392
+KT F Y+D I+ N L + ++ RSI + + + ++ +LY + + S+
Sbjct: 74 EKTGFAYADQITLNALHQSAQAARSIVREQG--TGTARTLGEVSHRALYPTLNPLDSLTR 131
Query: 393 REKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIV 452
+KI LL+R + +AR D RV +V A+L+G Y+++L+ DG + AD+RPLV+L ++++V
Sbjct: 132 EDKIALLQRADTVARAADARVQEVSASLTGVYELVLVAATDGTLAADVRPLVRLSISVLV 191
Query: 453 EKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLEAKPAPAGIMKVV 507
E G+RE G+SG G R Y+YF ++ ++ +V AL+NL A APAG M VV
Sbjct: 192 EAEGKRERGSSGGGMRGGYDYFWEVADGEARVDAWAKEAVRMALVNLSAVAAPAGPMPVV 251
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LG GWPG+LLHEA+GHGLEGDFNR+G+S FS +GK +AS+ T+VD+GTL+ RRGS+++
Sbjct: 252 LGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGKLVASELCTVVDDGTLSGRRGSLSM 311
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML G
Sbjct: 312 DDEGVPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNTYMLAG 371
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
K PEEIISSV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+ G+IT PVKGATLIG G
Sbjct: 372 KSTPEEIISSVEYGLYAPNFGGGQVDITSGKFVFSTSEAYLIEKGRITTPVKGATLIGSG 431
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK++S+TVGGT
Sbjct: 432 IEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLESLTVGGT 480
>gi|423141886|ref|ZP_17129524.1| TldD protein [Salmonella enterica subsp. houtenae str. ATCC
BAA-1581]
gi|379051058|gb|EHY68950.1| TldD protein [Salmonella enterica subsp. houtenae str. ATCC
BAA-1581]
Length = 481
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 263/480 (54%), Positives = 355/480 (73%), Gaps = 7/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L+ + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLNHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QGVGVRAISG+KT F Y+D IS L + ++ R+I + NG+ K+ K + + LY
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSARAARTIV-RDNGEGKV-KTLAAVAHQPLY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ D + S++ EK+ +L RV+K AR D RV +V A+L+G Y++IL+ DG + ADIR
Sbjct: 121 TTLDPLQSMSREEKLDILRRVDKAAREADKRVQEVNASLTGVYELILVAATDGTLAADIR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L V++ VE++G+RE G SG GGR+ Y YF ++ + +V AL+NL A
Sbjct: 181 PLVRLSVSVQVEEDGKRERGASGGGGRFGYEYFLADLDGEVRADAWAKEAVRMALVNLSA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG+++AS T+VD+G
Sbjct: 241 VAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQIGEQVASALCTVVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS+ IDDEG P Q LIENG+LKGYMQD +NARLM + TGN RRES+AH+P+
Sbjct: 301 TMMNRRGSVAIDDEGTPGQYNVLIENGVLKGYMQDKLNARLMGAAPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 361 PRMTNTYMLAGQSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTT 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++ VGGT
Sbjct: 421 PVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLVVGGT 480
>gi|227327946|ref|ZP_03831970.1| protease TldD [Pectobacterium carotovorum subsp. carotovorum WPP14]
Length = 481
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 255/469 (54%), Positives = 348/469 (74%), Gaps = 9/469 (1%)
Query: 273 FDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISG 332
+LD+ L +LG++ + ++DYAD YFQ + +E+W+LE+ I+K G+++I+QGVG+RAI G
Sbjct: 16 LNLDD--LAAVLGSLNERRLDYADLYFQSSYHESWVLEDRIIKDGSYNIDQGVGIRAIDG 73
Query: 333 DKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINI 392
+KT F Y+D I+ N L + ++ RSI + + + ++LY + + S+
Sbjct: 74 EKTGFAYADQITLNALHQSAQAARSIVREQG--TGTAHTLGAVSHHALYPTLNPLDSLTR 131
Query: 393 REKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIV 452
+KI LL+R + +AR D RV +V A+L+G Y+++L+ DG + AD+RPLV+L ++++V
Sbjct: 132 EDKIALLQRADTVARAADARVQEVSASLTGVYELVLVAATDGTLAADVRPLVRLSISVLV 191
Query: 453 EKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLEAKPAPAGIMKVV 507
E G+RE G+SG G R Y+YF ++ ++ +V AL+NL A APAG M VV
Sbjct: 192 EAEGKRERGSSGGGLRGGYDYFWEVADGEARVDAWAKEAVRMALVNLSAVAAPAGPMPVV 251
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LG GWPG+LLHEA+GHGLEGDFNR+G+S FS +GK +AS+ T+VD+GTL RRGSI++
Sbjct: 252 LGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGKLVASELCTVVDDGTLTGRRGSISM 311
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG P Q LIENGILKGYMQD MNARLM ++ TGN RRES+AH+P+PRMTNTYML G
Sbjct: 312 DDEGVPGQYNVLIENGILKGYMQDKMNARLMGVAPTGNGRRESYAHLPMPRMTNTYMLAG 371
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
K PEEIISSV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+ G+IT PVKGATLIG G
Sbjct: 372 KSTPEEIISSVEYGLYAPNFGGGQVDITSGKFVFSTSEAYLIEKGRITTPVKGATLIGSG 431
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK++S+TVGGT
Sbjct: 432 IEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLESLTVGGT 480
>gi|213616023|ref|ZP_03371849.1| protease TldD [Salmonella enterica subsp. enterica serovar Typhi
str. E98-2068]
Length = 481
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 262/480 (54%), Positives = 355/480 (73%), Gaps = 7/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L+ + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLNHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QGVGVRAISG+KT F Y+D IS L + ++ R+I + NG+ K+ K + + LY
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRE-NGEGKV-KTLAAVAHQPLY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ D + S++ EK+ +L RV+K AR D RV +V A+L+G Y++IL+ DG + AD+R
Sbjct: 121 TTLDPLQSMSREEKLDILRRVDKAAREADKRVQEVNASLTGVYELILVAATDGTLAADVR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L V++ VE++G+RE G SG GGR+ Y YF ++ + +V AL+NL A
Sbjct: 181 PLVRLSVSVQVEEDGKRERGASGGGGRFGYEYFLADLDGEVRADAWAKEAVRMALVNLSA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG+++AS T+VD+G
Sbjct: 241 VAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQIGEQVASALCTVVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS+ IDDEG P Q LIENG+LKGYMQD +NARLM + T N RRES+AH+P+
Sbjct: 301 TMMNRRGSVAIDDEGTPGQYNVLIENGVLKGYMQDKLNARLMGAAPTSNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 361 PRMTNTYMLAGQSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTT 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGGT
Sbjct: 421 PVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGGT 480
>gi|392533981|ref|ZP_10281118.1| suppressor of CsrA inhibitory activity; peptidase; involved in the
control of DNA gyrase [Pseudoalteromonas arctica A
37-1-2]
Length = 479
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 263/480 (54%), Positives = 355/480 (73%), Gaps = 7/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N LL+ L+ + L K L + ++KVDYAD YFQ + +E+W+LE+G+VK G++++
Sbjct: 1 MNSVEQHLLQDSQLNREELEKTLAYIHQHKVDYADLYFQSSHHESWVLEDGLVKEGSYNV 60
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+GVGVRA+SG+KT F YSD I+ L A + RSIA+ G+ + IK +K +
Sbjct: 61 ERGVGVRAVSGEKTGFSYSDAINLEALNKAATAARSIADA--GEDRAIKVFSDVKAKEQF 118
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ ISS++ +K+ LL +E R P +VI+++S Y+ +LI +DG DIR
Sbjct: 119 APHQPISSMSDTDKVSLLRELENYIRELAPDAEQVISSMSAVYEEVLIAASDGTFATDIR 178
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEK-----CVSNSVNSALINLEA 496
PL++L ++++EKNGRRE G +G G R +Y YF +++ K +V A +NLEA
Sbjct: 179 PLIRLNCSVLLEKNGRRERGGAGGGARLDYGYFKELVDGKPRWMEFAEEAVRQAKVNLEA 238
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M+VVLG GWPG+LLHEA+GHGLEGDFNRKG+SAFS +G+++AS+ T+VD+G
Sbjct: 239 IDAPAGTMEVVLGNGWPGVLLHEAVGHGLEGDFNRKGASAFSGKVGQKVASELCTVVDDG 298
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+A+RRGS+N+DDEG P LIENGILKGYMQD +NARLM +S TGNARRES+AH+P+
Sbjct: 299 TMADRRGSLNVDDEGTPAAYNVLIENGILKGYMQDKLNARLMGVSPTGNARRESYAHLPM 358
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ +IISSVK G++A NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 359 PRMTNTYMLGGEHSQADIISSVKKGVFAPNFGGGQVDITSGKFVFSASEAYLIENGKITQ 418
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG+GP +++++SM+GND+ LD GVGVCGKDGQ VPVGVGQP+LKID +TVGGT
Sbjct: 419 PIKGATLIGNGPEVMQQISMVGNDLALDKGVGVCGKDGQSVPVGVGQPSLKIDRLTVGGT 478
>gi|424069324|ref|ZP_17806770.1| tldD protein [Pseudomonas syringae pv. avellanae str. ISPaVe013]
gi|424073707|ref|ZP_17811122.1| peptidase U62, modulator of DNA gyrase [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
gi|440722167|ref|ZP_20902550.1| C69 family peptidase [Pseudomonas syringae BRIP34876]
gi|440725879|ref|ZP_20906139.1| C69 family peptidase [Pseudomonas syringae BRIP34881]
gi|443642387|ref|ZP_21126237.1| Putative Zn-dependent protease/modulator of DNA gyrase, TldD family
[Pseudomonas syringae pv. syringae B64]
gi|407994945|gb|EKG35497.1| tldD protein [Pseudomonas syringae pv. avellanae str. ISPaVe013]
gi|407995519|gb|EKG36042.1| peptidase U62, modulator of DNA gyrase [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
gi|440361696|gb|ELP98913.1| C69 family peptidase [Pseudomonas syringae BRIP34876]
gi|440367766|gb|ELQ04821.1| C69 family peptidase [Pseudomonas syringae BRIP34881]
gi|443282404|gb|ELS41409.1| Putative Zn-dependent protease/modulator of DNA gyrase, TldD family
[Pseudomonas syringae pv. syringae B64]
Length = 479
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 264/471 (56%), Positives = 349/471 (74%), Gaps = 5/471 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L L +LG++ +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 11 LLAPGGLSLDSLQSVLGDLAGPGIDAADLYFQGMISESWSLEDGIVKEGSFNLDQGVGVR 70
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
A SG+KT F YS+ I+ L A ++ RSI+ NG+++ + + LY+ + +
Sbjct: 71 AQSGEKTGFAYSNAITPEALRTAAQAARSISRAGQNGRVQAFTSQD---VAQLYAPDNPL 127
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
++ EK++LL+R++ R D R+ +V +++G ++ IL+ DG + AD+RPLV+
Sbjct: 128 EVLSRAEKVELLKRIDVATRALDSRIQQVSVSMAGVWERILVAAADGSLAADVRPLVRFN 187
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKV 506
V++IVE+NGRRE G G GGR +Y YF TD ++ AL+NLEA PAPAG + V
Sbjct: 188 VSVIVEQNGRRERGGHGGGGRTDYRYFLTDDRAMGYAREALRQALVNLEAIPAPAGTLPV 247
Query: 507 VLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSIN 566
VLG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+GTLA RRGS++
Sbjct: 248 VLGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGTLAGRRGSLS 307
Query: 567 IDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLN 626
+DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML
Sbjct: 308 VDDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYMLG 367
Query: 627 GKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGH 686
G+ P+EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+
Sbjct: 368 GQSDPQEIIASVKRGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGN 427
Query: 687 GPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
GP + +VSM+GND+ LD GVG CGKDGQ +PVGVGQPTLKID+ITVGGT
Sbjct: 428 GPEAMSRVSMVGNDLSLDSGVGTCGKDGQSLPVGVGQPTLKIDAITVGGTG 478
>gi|254490602|ref|ZP_05103788.1| TldD/PmbA family [Methylophaga thiooxidans DMS010]
gi|224464346|gb|EEF80609.1| TldD/PmbA family [Methylophaga thiooxydans DMS010]
Length = 480
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 262/469 (55%), Positives = 335/469 (71%), Gaps = 3/469 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L + L L VDYAD YFQ ++ E+W+LE+GI+K G + + QGVGVR
Sbjct: 13 LLAPAGLSDTDLETALSMTMTRGVDYADLYFQQSRQESWVLEDGIIKDGGYHLEQGVGVR 72
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YSDD+ L A K+ ++I++Q GK + +K LYS D I
Sbjct: 73 ACSGEKTGFAYSDDLILPALQKAAKAAQAISHQ--GKEQQCAVWQKNTSPVLYSHHDPIL 130
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
+ + EK+ LL + AR+ DPRV +V +L+G D +LI +DG DIRPLV++ V
Sbjct: 131 VLTVEEKLALLREADAAARIADPRVKQVNVSLAGGIDTVLIAASDGTYATDIRPLVRMNV 190
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMILE-KCVSNSVNSALINLEAKPAPAGIMKVV 507
++IVE NGRRE G++G G R +Y YF D L +V AL+NLEA APAG M VV
Sbjct: 191 SVIVESNGRRERGSAGGGRRMDYRYFQDNNLAVSYAREAVRLALVNLEAVAAPAGTMPVV 250
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+++AS T+VD+GTL RRGS+N+
Sbjct: 251 LGNGWPGVLLHEAVGHGLEGDFNRRGTSTFSGMMGQQVASPLCTVVDDGTLEFRRGSLNV 310
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG Q TTLIE G L GYMQD NARLM TGN RRES+AH+P+PRMTNTYML G
Sbjct: 311 DDEGEKAQFTTLIEKGKLTGYMQDKHNARLMGTKSTGNGRRESYAHLPMPRMTNTYMLPG 370
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ EEII+SV G+YA NF GGQVDIT+GKFVFS S+AY+I+NGKIT PVKGATLIG+G
Sbjct: 371 EHKAEEIIASVDKGIYAVNFGGGQVDITSGKFVFSTSEAYLIENGKITQPVKGATLIGNG 430
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P +++++SM+ +D++LD GVG CGK+GQ VPVGVGQPTLK+D++TVGGT
Sbjct: 431 PEVMQRISMVADDLELDTGVGNCGKEGQSVPVGVGQPTLKVDALTVGGT 479
>gi|443468357|ref|ZP_21058587.1| TldD protein, part of proposed TldE/TldD proteolytic complex
[Pseudomonas pseudoalcaligenes KF707]
gi|442897474|gb|ELS24416.1| TldD protein, part of proposed TldE/TldD proteolytic complex
[Pseudomonas pseudoalcaligenes KF707]
Length = 480
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 269/471 (57%), Positives = 352/471 (74%), Gaps = 5/471 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P DL + L +ILG + +D AD YFQ +E+W+LE+GIVK G+F ++QGVGVR
Sbjct: 12 LLAPGDLSIEQLPEILGELAGPGIDAADLYFQGQVSESWVLEDGIVKEGSFHLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ + L A ++ RSI+ G+ ++ ++ LY + +
Sbjct: 72 AQSGEKTGFAYSNAITFDALRQAARAARSISRA--GQEGRVQAFASPQVTRLYDSSSPLE 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
I+ EK++LL+RV+ R DPR+ +V +++G ++ ILI +DG + AD+RPLV+ V
Sbjct: 130 VISRAEKVELLKRVDAATRALDPRIKQVTVSMAGVWERILIAASDGSLGADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF--TDMILEKCVSNSVNSALINLEAKPAPAGIMKV 506
++IVE+NGRRE G G GGR +Y YF D + ++ AL+NLEA PAPAG + V
Sbjct: 190 SVIVEQNGRRERGGHGGGGRTDYRYFLQEDRAM-GYAREALRQALVNLEAVPAPAGTLPV 248
Query: 507 VLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSIN 566
V+G GW G+LLHEA+GHGLEGDFNRKGSSA+S IG+++AS TIVD+GTLA RRGS++
Sbjct: 249 VMGAGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRIGEKVASSLCTIVDDGTLAQRRGSLS 308
Query: 567 IDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLN 626
IDDEG PTQCTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML
Sbjct: 309 IDDEGTPTQCTTLIENGVLKGYMQDKLNARLMKVARTGNGRRESYAHLPMPRMTNTYMLA 368
Query: 627 GKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGH 686
G+ P+EII+SV+ GLY N GGQVDIT+GKFVFS S+AY+I+NG+IT PVKGATLIG+
Sbjct: 369 GQSDPQEIIASVERGLYCANLGGGQVDITSGKFVFSTSEAYLIENGRITTPVKGATLIGN 428
Query: 687 GPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
GP + +VSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID++TVGGT
Sbjct: 429 GPEAMSRVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKIDAMTVGGTG 479
>gi|227114037|ref|ZP_03827693.1| protease TldD [Pectobacterium carotovorum subsp. brasiliensis
PBR1692]
Length = 481
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 254/469 (54%), Positives = 348/469 (74%), Gaps = 9/469 (1%)
Query: 273 FDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISG 332
+LD+ L +LG++ + ++DYAD YFQ + +E+W+LE+ I+K G+++I+QGVG+RAI G
Sbjct: 16 LNLDD--LAAVLGSLNERRLDYADLYFQSSYHESWVLEDRIIKDGSYNIDQGVGIRAIDG 73
Query: 333 DKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINI 392
+KT F Y+D I+ N L + ++ RSI + + + N+LY + + S+
Sbjct: 74 EKTGFAYADQITLNALHQSAQAARSIVREQG--TGTAHTLGAVSHNALYPTLNPLDSLTR 131
Query: 393 REKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIV 452
+KI LL+R + +AR D RV +V A+L+G Y+++L+ DG + AD+RPLV+L ++++V
Sbjct: 132 EDKIALLQRADTVARAADARVQEVSASLTGVYELVLVAATDGTLAADVRPLVRLSISVLV 191
Query: 453 EKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLEAKPAPAGIMKVV 507
E G+RE G+SG G R Y+YF ++ ++ +V AL+NL A APAG M VV
Sbjct: 192 ESEGKRERGSSGGGMRGGYDYFWEVADGEARVDAWAKEAVRMALVNLSAVAAPAGPMPVV 251
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LG GWPG+LLHEA+GHGLEGDFNR+G+S FS +GK +AS+ T+VD+GTL RRGS+++
Sbjct: 252 LGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGKLVASELCTVVDDGTLTGRRGSLSM 311
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML G
Sbjct: 312 DDEGVPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNTYMLAG 371
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
K PEEIISSV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+ G+IT PVKGATLIG G
Sbjct: 372 KSTPEEIISSVEYGLYAPNFGGGQVDITSGKFVFSTSEAYLIEKGRITTPVKGATLIGSG 431
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK++S+TVGGT
Sbjct: 432 IEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLESLTVGGT 480
>gi|66047383|ref|YP_237224.1| C69 family peptidase [Pseudomonas syringae pv. syringae B728a]
gi|63258090|gb|AAY39186.1| microcin-processing peptidase 2, Unknown type peptidase, MEROPS
family U62 [Pseudomonas syringae pv. syringae B728a]
Length = 479
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 264/471 (56%), Positives = 350/471 (74%), Gaps = 5/471 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L+ L +LG++ +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 11 LLAPGGLNLDSLQSVLGDLAGPGIDAADLYFQGMISESWSLEDGIVKEGSFNLDQGVGVR 70
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
A SG+KT F YS+ I+ L A ++ RSI+ NG+++ + + LY+ + +
Sbjct: 71 AQSGEKTGFAYSNAITPEALRTAAQAARSISRAGQNGRVQAFTSQD---VAQLYAPDNPL 127
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
++ EK++LL+R++ R D R+ +V +++G ++ IL+ DG + AD+RPLV+
Sbjct: 128 EVLSRAEKVELLKRIDVATRALDSRIQQVSVSMAGVWERILVAAADGSLAADVRPLVRFN 187
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKV 506
V++IVE+NGRRE G G GGR +Y YF TD ++ AL+NLEA PAPAG + V
Sbjct: 188 VSVIVEQNGRRERGGHGGGGRTDYRYFLTDDRAMGYAREALRQALVNLEAIPAPAGTLPV 247
Query: 507 VLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSIN 566
VLG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+GTLA RRGS++
Sbjct: 248 VLGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGTLAGRRGSLS 307
Query: 567 IDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLN 626
+DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML
Sbjct: 308 VDDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYMLG 367
Query: 627 GKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGH 686
G+ P+EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+
Sbjct: 368 GQSDPQEIIASVKRGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGN 427
Query: 687 GPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
GP + +VSM+GND+ LD GVG CGKDGQ +PVGVGQPTLKID+ITVGGT
Sbjct: 428 GPEAMSRVSMVGNDLSLDSGVGTCGKDGQSLPVGVGQPTLKIDAITVGGTG 478
>gi|359443302|ref|ZP_09233145.1| TldD protein [Pseudoalteromonas sp. BSi20429]
gi|358034880|dbj|GAA69394.1| TldD protein [Pseudoalteromonas sp. BSi20429]
Length = 479
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 263/480 (54%), Positives = 354/480 (73%), Gaps = 7/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N LL L+ + L K L + ++KVDYAD YFQ + +E+W+LE+G+VK G++++
Sbjct: 1 MNSVEQHLLHDSQLNREELEKTLAYIHQHKVDYADLYFQSSHHESWVLEDGLVKEGSYNV 60
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+GVGVRA+SG+KT F YSD I+ L A + RSIA+ G+ + IK +K +
Sbjct: 61 ERGVGVRAVSGEKTGFSYSDAINLEALNKAATAARSIADA--GEDRAIKVFSDVKAKEQF 118
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ ISS++ +K+ LL +E R P +VI+++S Y+ +LI +DG DIR
Sbjct: 119 APHQPISSMSDTDKVSLLRELENYIRELAPDAEQVISSMSAVYEEVLIAASDGTFATDIR 178
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEK-----CVSNSVNSALINLEA 496
PL++L ++++EKNGRRE G +G G R +Y YF +++ K +V A +NLEA
Sbjct: 179 PLIRLNCSVLLEKNGRRERGGAGGGARLDYGYFKELVDGKPRWMEFAEEAVRQAKVNLEA 238
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M+VVLG GWPG+LLHEA+GHGLEGDFNRKG+SAFS +G+++AS+ T+VD+G
Sbjct: 239 IDAPAGTMEVVLGNGWPGVLLHEAVGHGLEGDFNRKGASAFSGKVGQKVASELCTVVDDG 298
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+A+RRGS+N+DDEG P LIENGILKGYMQD +NARLM +S TGNARRES+AH+P+
Sbjct: 299 TMADRRGSLNVDDEGTPAAYNVLIENGILKGYMQDKLNARLMGVSPTGNARRESYAHLPM 358
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ +IISSVK G++A NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 359 PRMTNTYMLGGEHSQADIISSVKKGVFAPNFGGGQVDITSGKFVFSASEAYLIENGKITQ 418
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG+GP +++++SM+GND+ LD GVGVCGKDGQ VPVGVGQP+LKID +TVGGT
Sbjct: 419 PIKGATLIGNGPEVMQQISMVGNDLALDKGVGVCGKDGQSVPVGVGQPSLKIDQLTVGGT 478
>gi|383812988|ref|ZP_09968415.1| protease TldD [Serratia sp. M24T3]
gi|383298398|gb|EIC86705.1| protease TldD [Serratia sp. M24T3]
Length = 481
Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust.
Identities = 265/474 (55%), Positives = 352/474 (74%), Gaps = 9/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL +L ++ L +LG + + ++DYAD +FQ + +E W++E+ I+K G+++I+QGVGVR
Sbjct: 10 LLTANNLSQQDLFTVLGQLAERRLDYADLFFQSSFHEAWVIEDSIIKDGSYNIDQGVGVR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSLYSFTDTI 387
A+SG+KT F Y+D I+ N L + ++ RSI Q NGK + I+ +LYS D +
Sbjct: 70 AVSGEKTGFAYADQITLNALNQSAQAARSIVREQGNGKSHTLGAIQHA---ALYSLADPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S+ EKI LL RV+K AR D RV++V A+++G Y+ IL+ DG + DIRPLV+L
Sbjct: 127 QSLPREEKIALLHRVDKAARAADKRVVEVSASITGVYESILVAATDGTLATDIRPLVRLS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLEAKPAPAG 502
V+++VE++G RE G+SG GGR Y YF + + E +V AL+NL A APAG
Sbjct: 187 VSVLVEQDGLRERGSSGGGGRSGYEYFLETVDGEVRAEAFAHEAVRMALVNLGAVAAPAG 246
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +GK +AS+ T+VD+GT+ RR
Sbjct: 247 AMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSMFSGQMGKLVASELCTVVDDGTMQGRR 306
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GSI++DDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNT
Sbjct: 307 GSISVDDEGVPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNT 366
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
Y+L G+ PE+IISSV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+ G+IT PVKGAT
Sbjct: 367 YLLGGQSTPEDIISSVEYGLYAPNFGGGQVDITSGKFVFSTSEAYLIEKGRITKPVKGAT 426
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
LIG G ++++SM+GND+ LD GVGVCGK+GQ VPVGVGQPTLK+DS+TVGGT
Sbjct: 427 LIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSVPVGVGQPTLKLDSLTVGGT 480
>gi|342903855|ref|ZP_08725658.1| Protein tldD [Haemophilus haemolyticus M21621]
gi|341954303|gb|EGT80791.1| Protein tldD [Haemophilus haemolyticus M21621]
Length = 482
Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust.
Identities = 252/481 (52%), Positives = 345/481 (71%), Gaps = 5/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN + LL P +L K LL I M +DYAD YFQ +++E+W+LE+GI+K G F I
Sbjct: 2 LNQVSNTLLTPSNLSTKALLNIFDMMSHRNIDYADLYFQLSQDESWVLEDGIIKEGGFHI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVGVRA+SG+KT F Y+D I+ +L ++ + IA G + + + Y
Sbjct: 62 DRGVGVRAVSGEKTGFAYADQINLASLQQCAEAVKGIAQVKQGNLISPSAFNAVNPIARY 121
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + S+ +KI+LL V++ A +D RV +V A+LS Y+ +L+ DG + DIR
Sbjct: 122 AAINPLESLTKEKKIELLHLVDRTAHAEDHRVTRVSASLSSVYEEVLVMATDGTLAVDIR 181
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLEA 496
PLV+L ++++VE+NG+RE G+ G GGR+ ++F ++I + +V AL+NL A
Sbjct: 182 PLVRLSISVLVEENGKRERGSCGSGGRFGLDWFFEVIDGDIRAVRFAKEAVRQALVNLSA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS F+ IG+++ S TIVDNG
Sbjct: 242 IAAPAGLMPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSLFTGKIGEQVTSALCTIVDNG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS+ IDDEG P+QC LI++GIL+GYMQD MNARLM ++ TGN RRES+AH+P+
Sbjct: 302 TIENRRGSLTIDDEGVPSQCNVLIKDGILQGYMQDKMNARLMGVAPTGNGRRESYAHLPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ +++I+SV+ G+YA +F GGQVDIT+GKFVFS S+AY+I+ GKIT
Sbjct: 362 PRMTNTYMLAGQSQFDDLIASVEQGIYAPHFGGGQVDITSGKFVFSTSEAYLIEKGKITK 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G +++K+SM+ + +LD G+GVCGK+GQ VPVGVGQP LKID ITVGGT
Sbjct: 422 PVKGATLIGSGIEVMQKISMVADKSELDLGIGVCGKEGQSVPVGVGQPALKIDEITVGGT 481
Query: 737 N 737
N
Sbjct: 482 N 482
>gi|409394201|ref|ZP_11245430.1| peptidase U62, modulator of DNA gyrase [Pseudomonas sp. Chol1]
gi|409121258|gb|EKM97396.1| peptidase U62, modulator of DNA gyrase [Pseudomonas sp. Chol1]
Length = 480
Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust.
Identities = 268/470 (57%), Positives = 350/470 (74%), Gaps = 3/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L L +LG + +D AD YFQ +E+W+LE+GIVK G F + QGVGVR
Sbjct: 12 LLTPGGLGIDDLPALLGELAGPGIDAADLYFQDQVSESWVLEDGIVKEGGFHLEQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+SG+KT F YS+ I+ L A ++ RSIA +G+ ++ + + LYS + +
Sbjct: 72 ALSGEKTGFAYSNAITAEALRQAAQAARSIAR--SGQQGSVRVLSRAAFAPLYSQENPLD 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ EK++LL+R++ R DPR+ +V +L+G ++ IL+ DG + AD+RPLV+ V
Sbjct: 130 GLSRAEKVELLKRIDVATRALDPRIKQVTVSLAGVWEHILVAGMDGGMAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
++IVE+NGRRE G G GGR Y YF ++ ++ AL+NLEA+PAPAG + VV
Sbjct: 190 SVIVEQNGRRERGGQGGGGRLGYQYFLSEDRAMGYAREALRQALVNLEAQPAPAGSLPVV 249
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LGPGW G+LLHEA+GHGLEGDFNRKGSSA+S IG+++ASK TIVD+GTLA+RRGS+++
Sbjct: 250 LGPGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRIGQQVASKLCTIVDDGTLADRRGSLSV 309
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PTQCTTLIENG+LKGY+QD +NARLM ++ TGN RRES+AH+P+PRMTNTYML G
Sbjct: 310 DDEGTPTQCTTLIENGVLKGYIQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNTYMLAG 369
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ PEEII SVK GLY + GGQVDIT+GKFVFS S+AY+I++G+IT PVKGATLIG+G
Sbjct: 370 ESDPEEIIRSVKRGLYCASLGGGQVDITSGKFVFSTSEAYLIEDGRITAPVKGATLIGNG 429
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
P ++ +VSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID ITVGGT
Sbjct: 430 PEVMTRVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKIDEITVGGTG 479
>gi|421082700|ref|ZP_15543582.1| Protein TldD [Pectobacterium wasabiae CFBP 3304]
gi|401702544|gb|EJS92785.1| Protein TldD [Pectobacterium wasabiae CFBP 3304]
Length = 481
Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust.
Identities = 253/469 (53%), Positives = 349/469 (74%), Gaps = 9/469 (1%)
Query: 273 FDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISG 332
+LD+ L +LG++ + ++DYAD YFQ + +E+W+LE+ I+K G+++I+QGVG+RAI G
Sbjct: 16 LNLDD--LAAVLGSLNERRLDYADLYFQSSYHESWVLEDRIIKDGSYNIDQGVGIRAIDG 73
Query: 333 DKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINI 392
+KT F Y+D I+ N L + ++ RSI + + + ++ +LY + + S+
Sbjct: 74 EKTGFAYADQITLNALHQSAQAARSIVREQG--TGTARTLGEVSHRALYPTLNPLDSLTR 131
Query: 393 REKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIV 452
+KI LL+R + +AR D RV +V A+L+G Y+++L+ DG + AD+RPLV+L ++++V
Sbjct: 132 EDKIALLQRADTVARAADARVQEVSASLTGVYELVLVAATDGTLAADVRPLVRLSISVLV 191
Query: 453 EKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLEAKPAPAGIMKVV 507
E G+RE G+SG G R Y YF ++ ++ +V AL+NL A APAG M VV
Sbjct: 192 EAEGKRERGSSGGGTRGGYEYFWEVTDGEPRVDAWAKEAVRMALVNLSAVAAPAGPMPVV 251
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LG GWPG+LLHEA+GHGLEGDFNR+G+S FS +GK +AS+ T+VD+GTL+ RRGS+++
Sbjct: 252 LGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGKLVASELCTVVDDGTLSGRRGSLSM 311
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML G
Sbjct: 312 DDEGVPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNTYMLAG 371
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
K PEEIISSV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+ G+IT PVKGATLIG G
Sbjct: 372 KSTPEEIISSVEYGLYAPNFGGGQVDITSGKFVFSTSEAYLIEKGRITTPVKGATLIGSG 431
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK++S+TVGGT
Sbjct: 432 IEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLESLTVGGT 480
>gi|148825807|ref|YP_001290560.1| hypothetical protein CGSHiEE_03790 [Haemophilus influenzae PittEE]
gi|386265716|ref|YP_005829208.1| Protease TldD [Haemophilus influenzae R2846]
gi|148715967|gb|ABQ98177.1| TldD [Haemophilus influenzae PittEE]
gi|309972952|gb|ADO96153.1| Protease TldD [Haemophilus influenzae R2846]
Length = 482
Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust.
Identities = 254/481 (52%), Positives = 345/481 (71%), Gaps = 5/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN + LL P +L K LL I M +DYAD YFQ +++E+W+LE+GI+K G F I
Sbjct: 2 LNQVSNTLLTPSNLSTKSLLNIFDIMSHRNIDYADLYFQLSQDESWVLEDGIIKEGGFHI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVGVRA+SG+KT F Y+D I+ ++L ++ + IA G + + + Y
Sbjct: 62 DRGVGVRAVSGEKTGFAYADQINLSSLQQCAEAVKGIAQVKQGNLISPSAFNVVNPIARY 121
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + S+ KI+LL V++ R +D RV KV A+LS Y+ +LI DG + ADIR
Sbjct: 122 AAINPLESLTKERKIELLHLVDRTVRAEDHRVTKVSASLSSVYEEVLIMATDGTLAADIR 181
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKC-----VSNSVNSALINLEA 496
PLV+L ++++VE+NG+RE G+ G GGR+ ++F +++ +V AL+NL A
Sbjct: 182 PLVRLSISVLVEENGKRERGSCGSGGRFGLDWFFEVVDGDIRAVLFAKEAVRQALVNLSA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS F+ IG+++ S TIVD+G
Sbjct: 242 VAAPAGLMPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSLFTGKIGEQVTSPLCTIVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS+ IDDEG P+QC LI++GIL+GYMQD MNARLM ++ TGN RRES+AH+P+
Sbjct: 302 TIENRRGSLTIDDEGVPSQCNVLIKDGILQGYMQDKMNARLMGVAPTGNGRRESYAHLPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ +++I+SVK G+YA +F GGQVDIT+GKFVFS S+AY+I+ GKIT
Sbjct: 362 PRMTNTYMLAGQSQFDDLIASVKQGIYAPHFGGGQVDITSGKFVFSTSEAYLIEKGKITK 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G +++K+SM+ + +LD G+GVCGK+GQ VPVGVGQP LKID ITVGGT
Sbjct: 422 PVKGATLIGSGIEVMQKISMVADKSELDLGIGVCGKEGQSVPVGVGQPALKIDEITVGGT 481
Query: 737 N 737
N
Sbjct: 482 N 482
>gi|417844008|ref|ZP_12490072.1| Protein tldD [Haemophilus haemolyticus M21127]
gi|341948057|gb|EGT74693.1| Protein tldD [Haemophilus haemolyticus M21127]
Length = 482
Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust.
Identities = 253/481 (52%), Positives = 346/481 (71%), Gaps = 5/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN + LL P +L K LL I M +DYAD YFQ +++E+W+LE+GI+K G F I
Sbjct: 2 LNHVSNTLLTPSNLSTKALLNIFDMMSHRNIDYADLYFQLSQDESWVLEDGIIKEGGFHI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVGVRA+SG+KT F Y+D I+ +L ++ + IA G + + + Y
Sbjct: 62 DRGVGVRAVSGEKTGFAYADQINLASLQQCAEAVKGIAQVKQGNLISPSAFNVVNPIARY 121
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + S+ +KI+LL V++ AR +D RV +V A+LS Y+ IL+ DG + DIR
Sbjct: 122 AAINPLESLTKEKKIELLHLVDRTARAEDHRVTRVSASLSSVYEEILVMATDGTLATDIR 181
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLEA 496
PLV+L ++++VE+NG+RE G+ G GGR+ ++F ++I + +V AL+NL A
Sbjct: 182 PLVRLSISVLVEENGKRERGSCGSGGRFGLDWFFEVIDGDIRAVRFAKEAVRQALVNLSA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS F+ IG+++ S TIVD+G
Sbjct: 242 VAAPAGLMPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSLFTGKIGEQVTSPLCTIVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS+ IDDEG P+QC LI++GIL+GYMQD MNARLM ++ TGN RRES+AH+P+
Sbjct: 302 TIENRRGSLTIDDEGVPSQCNVLIKDGILQGYMQDKMNARLMGVAPTGNGRRESYAHLPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ +++I+SV+ G+YA +F GGQVDIT+GKFVFS S+AY+I+ GKIT
Sbjct: 362 PRMTNTYMLAGQSQFDDLIASVEQGIYAPHFGGGQVDITSGKFVFSTSEAYLIEKGKITK 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G +++K+SM+ + +LD G+GVCGK+GQ VPVGVGQP LKID ITVGGT
Sbjct: 422 PVKGATLIGSGIEVMQKISMVADKSELDLGIGVCGKEGQSVPVGVGQPALKIDEITVGGT 481
Query: 737 N 737
N
Sbjct: 482 N 482
>gi|407697410|ref|YP_006822198.1| peptidase U62 modulator of DNA gyrase [Alcanivorax dieselolei B5]
gi|407254748|gb|AFT71855.1| Peptidase U62 modulator of DNA gyrase [Alcanivorax dieselolei B5]
Length = 481
Score = 526 bits (1356), Expect = e-146, Method: Compositional matrix adjust.
Identities = 250/476 (52%), Positives = 344/476 (72%), Gaps = 3/476 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+A ILL P +L L +LG + DYAD YFQ +++E W+LE+G+V+ +F++
Sbjct: 7 FTLAADILLTPAELAPDQLQALLGGKLAGQADYADIYFQHSRHEAWVLEDGLVRDASFNL 66
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+G GVR +SGDKT F YSDDIS +TL A + +I Q + K +K + + Y
Sbjct: 67 ERGAGVRIVSGDKTGFAYSDDISLDTLTQAGNAAAAIGRQGSSKAVRVKGGRAMP--ERY 124
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ D + + K+ +L+ ++++AR DP V +V +LSG DVIL+ DG + AD+R
Sbjct: 125 APLDPLPVWSSERKVAVLQEMDRLARSLDPAVKEVTVSLSGVQDVILVAATDGTLAADVR 184
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAP 500
PLV+ +++I E+NGRRE G++G GGR +Y + D +E ++V AL+NLEA PAP
Sbjct: 185 PLVRFNISVIAERNGRRERGSAGGGGRVSYQWLEQDGRMESWARDAVRQALVNLEAAPAP 244
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG M VVLGPGWPG+LLHEA+GHGLEGDFNRKG+S F++ +G+++AS T+VD+GTL +
Sbjct: 245 AGAMPVVLGPGWPGVLLHEAVGHGLEGDFNRKGTSMFASRMGQKVASDLCTVVDDGTLPD 304
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+ +DDEG P+ LIE G+L GYMQD NARLM ++ TGN RRES+AH+P+PRMT
Sbjct: 305 RRGSLTVDDEGTPSGYNVLIEKGVLTGYMQDKTNARLMGVAPTGNGRRESYAHLPMPRMT 364
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYML G+ PEEI++S+ G+YA NF GGQVDIT+G+FVFS S+AY+++ GKI PVKG
Sbjct: 365 NTYMLPGESDPEEILASLDRGIYAVNFGGGQVDITSGRFVFSTSEAYLVEKGKIVCPVKG 424
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
ATLIG G ++ ++SM+GND+ LD G+GVCGK+GQ VPVGVGQPTL++DS+TVGGT
Sbjct: 425 ATLIGSGAEVMSRISMVGNDLALDTGIGVCGKEGQSVPVGVGQPTLRVDSLTVGGT 480
>gi|260582641|ref|ZP_05850430.1| TldD protein [Haemophilus influenzae NT127]
gi|260094313|gb|EEW78212.1| TldD protein [Haemophilus influenzae NT127]
Length = 482
Score = 526 bits (1356), Expect = e-146, Method: Compositional matrix adjust.
Identities = 254/481 (52%), Positives = 347/481 (72%), Gaps = 5/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN + LL P +L K LL I M +DYAD YFQ +++E+W+LE+GI+K G F I
Sbjct: 2 LNQVSNTLLTPSNLSTKSLLNIFDIMSHRNIDYADLYFQLSQDESWVLEDGIIKEGGFHI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVGVRA+SG+KT F Y+D I+ +L ++ + IA G + + + Y
Sbjct: 62 DRGVGVRAVSGEKTGFAYADQINLASLQQCAEAVKGIAQVKQGNLISPSAFNVVNPIARY 121
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + S+ +KI+LL V++ AR +D V KV A+LS Y+ +LI DG + ADIR
Sbjct: 122 AAINPLESLTKEKKIELLHLVDRTARAEDHSVTKVSASLSSVYEEVLIMATDGTLAADIR 181
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLEA 496
PLV+L ++++VE+NG+RE G+ G GGR++ ++F ++I +V AL+NL A
Sbjct: 182 PLVRLSISVLVEENGKRERGSCGSGGRFSLDWFFEVIDGDIRAALFAKEAVRQALVNLSA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS F+ IG+++ S TIVD+G
Sbjct: 242 VAAPAGLMPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSLFTGKIGEQVTSPLCTIVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS+ IDDEG P+QC LI++GIL+GYMQD MNARLM ++ TGN RRES+AH+P+
Sbjct: 302 TIENRRGSLTIDDEGVPSQCNVLIKDGILQGYMQDKMNARLMGVAPTGNGRRESYAHLPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML+G+ +++I+SV+ G+YA +F GGQVDIT+GKFVFS S+AY+I+ GKIT
Sbjct: 362 PRMTNTYMLSGQSQFDDLIASVEQGIYAPHFGGGQVDITSGKFVFSTSEAYLIEKGKITK 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G +++K+SM+ + +LD G+GVCGK+GQ VPVGVGQP LKID ITVGGT
Sbjct: 422 PVKGATLIGSGIEVMQKISMVADKSELDLGIGVCGKEGQSVPVGVGQPALKIDEITVGGT 481
Query: 737 N 737
N
Sbjct: 482 N 482
>gi|334702823|ref|ZP_08518689.1| protein TldD [Aeromonas caviae Ae398]
Length = 482
Score = 526 bits (1356), Expect = e-146, Method: Compositional matrix adjust.
Identities = 273/481 (56%), Positives = 364/481 (75%), Gaps = 7/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L+ + LL P DLDE L ++LG++ ++V++ D YFQ + +E+W+LE+GIVK G+++I
Sbjct: 4 LSQVSASLLAPNDLDEGRLQQLLGSLLSHQVEFGDLYFQRSWHESWMLEDGIVKDGSYNI 63
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QGVGVRA+SG+KT F YSD++S L +V T + + G +K + + N LY
Sbjct: 64 DQGVGVRAVSGEKTGFAYSDELSLLALQQSV--TAARGIAAAGAQGKVKAWARTEANLLY 121
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
D + +++ ++KI LLE+++K AR DP + +V+A++SG Y+ IL+ DG + AD+R
Sbjct: 122 PALDPLQTLDKQQKIALLEQMDKFARSLDPAINQVMASISGVYEEILVAATDGTLAADVR 181
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-LEK----CVSNSVNSALINLEA 496
PLV+L VT+I EK RRE G++G GGR+ Y++F ++ LE V +V AL+NLEA
Sbjct: 182 PLVRLSVTVIAEKGDRRERGSAGGGGRFGYDHFLELDGLESRAFGYVREAVRQALVNLEA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSSAF+ IG+++ASK TIVD+G
Sbjct: 242 IDAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRKGSSAFAGRIGEQVASKHCTIVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL RRGS++IDDEG P LIENGILKGY+QD NARLM +S+TGN RRES+A +P+
Sbjct: 302 TLPGRRGSVSIDDEGTPGGYNVLIENGILKGYLQDKQNARLMGVSLTGNGRRESYAALPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G++ P EII+SVKNG+YA NF GGQVDIT+GKFVFSAS+AY+I++GKIT
Sbjct: 362 PRMTNTYMLAGQYDPAEIIASVKNGIYAPNFGGGQVDITSGKFVFSASEAYLIEDGKITA 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG+GP + +VSM+G D+ LD GVGVCGK+GQ VPVGVGQPTLK+D +TVGGT
Sbjct: 422 PIKGATLIGNGPEAMSQVSMVGRDLALDRGVGVCGKEGQSVPVGVGQPTLKLDQLTVGGT 481
Query: 737 N 737
Sbjct: 482 Q 482
>gi|422019866|ref|ZP_16366408.1| protease TldD [Providencia alcalifaciens Dmel2]
gi|414102490|gb|EKT64082.1| protease TldD [Providencia alcalifaciens Dmel2]
Length = 481
Score = 526 bits (1356), Expect = e-146, Method: Compositional matrix adjust.
Identities = 269/474 (56%), Positives = 356/474 (75%), Gaps = 9/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL L + L ILG + + +VDY D +FQ + +E+W+LE+ I+K G+++I+QGVGVR
Sbjct: 10 LLAANGLSQDNLYDILGLLSERRVDYGDLFFQSSYHESWVLEDRIIKDGSYNIDQGVGVR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSI-ANQSNGKIKIIKNIKKIKINSLYSFTDTI 387
AI+G+KT F Y+D IS L + + RSI Q +GK +I+ N+ K LYS D +
Sbjct: 70 AITGEKTGFAYADQISLLALTQSATAARSIVTEQGSGKSQILTNVDYKK---LYSDADPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S+ +KI+LL RV+++AR +DPRVI+V A+L+G Y+ +L+ DG + DIRPLV+L
Sbjct: 127 RSLPREQKIELLHRVDQVARAEDPRVIEVNASLTGVYEQVLVAATDGTLAVDIRPLVRLS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYFTDM-----ILEKCVSNSVNSALINLEAKPAPAG 502
V+++VE +G+RE G SG GGRY Y YF ++ + E+ +V AL+NL A APAG
Sbjct: 187 VSVLVEHDGKRERGASGGGGRYGYEYFLEIHQGQVLAEQYAREAVRMALVNLSAIAAPAG 246
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
+M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+++AS T+VD+GT+A RR
Sbjct: 247 MMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGKMGEQVASSLCTVVDDGTIAGRR 306
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+ IDDEG P Q LIENGIL+ Y+QD NARLM ++ TGNARRES+AH+P+PRMTNT
Sbjct: 307 GSLAIDDEGVPGQYNVLIENGILRNYIQDKHNARLMGVAPTGNARRESYAHLPMPRMTNT 366
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML G+ PEEII+SV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+NGKIT PVKGAT
Sbjct: 367 YMLAGESTPEEIIASVEKGLYAPNFGGGQVDITSGKFVFSTSEAYLIENGKITSPVKGAT 426
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
LIG G ++++SM+GND+ LD GVGVCGK+GQ VPVGVGQPTLK+D +TVGGT
Sbjct: 427 LIGSGVEAMQQISMVGNDLALDKGVGVCGKEGQSVPVGVGQPTLKLDKMTVGGT 480
>gi|417429945|ref|ZP_12161081.1| TldD protein [Salmonella enterica subsp. enterica serovar
Mississippi str. A4-633]
gi|353615321|gb|EHC66890.1| TldD protein [Salmonella enterica subsp. enterica serovar
Mississippi str. A4-633]
Length = 477
Score = 526 bits (1356), Expect = e-146, Method: Compositional matrix adjust.
Identities = 261/473 (55%), Positives = 353/473 (74%), Gaps = 7/473 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL L+ + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I+QGVGVR
Sbjct: 6 LLAANGLNHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNIDQGVGVR 65
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
AISG+KT F Y+D IS L + ++ R+I + NG+ K+ K + + LY+ D +
Sbjct: 66 AISGEKTGFAYADQISLLALEQSAQAARTIV-RDNGEGKV-KTLAAVAHQPLYTTLDPLQ 123
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
S++ EK+ +L RV+K AR D RV +V A+L+G Y++IL+ DG + AD+RPLV+L V
Sbjct: 124 SMSREEKLDILRRVDKAAREADKRVQEVNASLTGVYELILVAATDGTLAADVRPLVRLSV 183
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEAKPAPAGI 503
++ VE++G+RE G SG GGR+ Y YF ++ + +V AL+NL A APAG
Sbjct: 184 SVQVEEDGKRERGASGGGGRFGYEYFLADLDGEVRADAWAKEAVRMALVNLSAVAAPAGT 243
Query: 504 MKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRG 563
+ VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG+++AS T+VD+GT+ NRRG
Sbjct: 244 LPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQIGEQVASALCTVVDDGTMMNRRG 303
Query: 564 SINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTY 623
S+ IDDEG P Q LIENG+LKGYMQD +NARLM + TGN RRES+AH+P+PRMTNTY
Sbjct: 304 SVAIDDEGTPGQYNVLIENGVLKGYMQDKLNARLMGAAPTGNGRRESYAHLPMPRMTNTY 363
Query: 624 MLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATL 683
ML G+ P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T PVKGATL
Sbjct: 364 MLAGQSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTTPVKGATL 423
Query: 684 IGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
IG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGGT
Sbjct: 424 IGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGGT 476
>gi|440285938|ref|YP_007338703.1| microcin-processing peptidase 2 [Enterobacteriaceae bacterium
strain FGI 57]
gi|440045460|gb|AGB76518.1| microcin-processing peptidase 2 [Enterobacteriaceae bacterium
strain FGI 57]
Length = 481
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 260/481 (54%), Positives = 357/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L+ + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAVNGLNHQRLFDILGQLAERRLDYGDLYFQSSYHESWVLEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D IS L + ++ R+I + +GK+ + + + L
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQISLLALEQSAQAARTIVRDAGDGKVHTLGAVDH---SPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+L+G Y++IL+ DG + AD+
Sbjct: 120 YTSLDPLQSMSREEKLDILRRVDKVARAADKRVQEVSASLTGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V++ V+ NG+RE G SG GGR+ Y+YF ++ + +V AL+NL
Sbjct: 180 RPLVRLSVSVQVDDNGKRERGASGGGGRFGYDYFLADLDGEVRADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGHMGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTMQDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLAGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KPVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|77361590|ref|YP_341165.1| suppressor of CsrA inhibitory activity; peptidase; involved in the
control of DNA gyrase [Pseudoalteromonas haloplanktis
TAC125]
gi|76876501|emb|CAI87723.1| putative suppressor of CsrA inhibitory activity; putative
peptidase; involved in the control of DNA gyrase
[Pseudoalteromonas haloplanktis TAC125]
Length = 479
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 263/480 (54%), Positives = 352/480 (73%), Gaps = 7/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N LL L+ + L K L + ++KVDYAD YFQ + +E+W+LE+G+VK G++++
Sbjct: 1 MNTVEQHLLHDSQLNREELEKTLAYIHQHKVDYADLYFQSSHHESWVLEDGLVKEGSYNV 60
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+GVGVRA+SG+KT F YSD I+ L A + RSIA G+ K I+ + +
Sbjct: 61 ERGVGVRAVSGEKTGFSYSDAITLEALNKAATAARSIAEA--GENKSIQVFSDVTAKQQF 118
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ ISS++ +K+ LL +E R P +VI+++S Y+ +LI +DG DIR
Sbjct: 119 APHQPISSMSDTDKVNLLRELENYIRELAPDAEQVISSMSAVYEEVLIAASDGTFATDIR 178
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEK-----CVSNSVNSALINLEA 496
PL++L ++++EKNGRRE G +G G R +Y YF +++ K +V A +NLEA
Sbjct: 179 PLIRLNCSVLLEKNGRRERGGAGGGARLDYGYFKELVEGKPRWMEFAEEAVRQAKVNLEA 238
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M+VVLG GWPG+LLHEA+GHGLEGDFNRKG+SAFS +G+++AS+ T+VD+G
Sbjct: 239 IDAPAGTMEVVLGNGWPGVLLHEAVGHGLEGDFNRKGASAFSGKVGQKVASELCTVVDDG 298
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+A+RRGS+N+DDEG P LIENGILKGYMQD MNARLM +S TGNARRES+AH+P+
Sbjct: 299 TMADRRGSLNVDDEGTPAAYNVLIENGILKGYMQDKMNARLMGVSPTGNARRESYAHLPM 358
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ +IISSVK G++A NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 359 PRMTNTYMLGGEHSQADIISSVKKGVFAPNFGGGQVDITSGKFVFSASEAYLIENGKITQ 418
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG+GP +++++SM+GND+ LD GVGVCGKDGQ VPVGVGQP+LKID +TVGGT
Sbjct: 419 PIKGATLIGNGPEVMQQISMVGNDLALDKGVGVCGKDGQSVPVGVGQPSLKIDKLTVGGT 478
>gi|402699615|ref|ZP_10847594.1| putative modulation of DNA gyrase-like protein [Pseudomonas fragi
A22]
Length = 480
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 267/470 (56%), Positives = 349/470 (74%), Gaps = 3/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P + + L +LG++ +D AD YFQ +E+W LE+GIVK G+FS++QGVGVR
Sbjct: 12 LLAPGGVTIESLQSVLGDLAGPGIDAADLYFQGQISESWALEDGIVKEGSFSLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ L A ++ RSI+ G+ ++ + LY+ + +
Sbjct: 72 AQSGEKTGFSYSNAITLEALGLAARAARSISRA--GQNGTVQAFTTQDVAQLYAPDNPLE 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
I+ EK++LL+R++ R DPR+ +V +++G ++ IL+ DG + AD+RPLV+ V
Sbjct: 130 VISRAEKVELLKRIDAATRALDPRIQQVTVSMAGVWERILVASTDGGLAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
++IVE+NGRRE G G GGR +Y YF T+ ++ AL+NLEA PAPAG M VV
Sbjct: 190 SVIVEQNGRRERGGHGGGGRTDYRYFLTEDRAMGYAREALRQALVNLEAVPAPAGTMPVV 249
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+GTLA RRGS+++
Sbjct: 250 LGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGTLAGRRGSLSV 309
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML G
Sbjct: 310 DDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYMLGG 369
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ P EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKITYP+KGATLIG+G
Sbjct: 370 ESDPAEIIASVKKGIYCANLGGGQVDITSGKFVFSTSEAYMIEDGKITYPIKGATLIGNG 429
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
P + KVSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 430 PEAMSKVSMVGNDLTLDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|334125857|ref|ZP_08499842.1| U62 family peptidase 2 TldD [Enterobacter hormaechei ATCC 49162]
gi|333386385|gb|EGK57600.1| U62 family peptidase 2 TldD [Enterobacter hormaechei ATCC 49162]
Length = 481
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 255/481 (53%), Positives = 356/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEHLLAANGLSHQDLFSILGQLTERRLDYGDLYFQSSYHESWVLEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D IS L + ++ R+I + +G++K + ++ +L
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQISLAALEQSAQAARTIVRDTGDGRVKTLGEVQH---TAL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTSIDPLQSMSREEKLDILRRVDKVARAADKRVQEVSASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLE 495
RPLV+L +++ VE +G+RE G+SG GGR+ Y++F + + +V AL+NL
Sbjct: 180 RPLVRLSISVQVEDDGKRERGSSGGGGRFGYDWFLGDVDGEARADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ ++S+ T+VD+
Sbjct: 240 AVAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGQLVSSELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGSI+IDDEG P Q LIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTMLDRRGSISIDDEGTPGQYNVLIENGVLKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV G++A NF GGQVDIT+GKFVFS S+AY+I+ GK+T
Sbjct: 360 MPRMTNTYMLPGKSTPQEIIESVDYGIFAPNFGGGQVDITSGKFVFSTSEAYLIEKGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
VKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KAVKGATLIGSGIEAMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|359780541|ref|ZP_09283767.1| hypothetical protein PPL19_05745 [Pseudomonas psychrotolerans L19]
gi|359371853|gb|EHK72418.1| hypothetical protein PPL19_05745 [Pseudomonas psychrotolerans L19]
Length = 481
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 255/478 (53%), Positives = 344/478 (71%), Gaps = 4/478 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN S LL P L L +L + +D AD YFQ +E+W+LE+GIVK G F +
Sbjct: 5 LNSVGSALLGPGGLAVDDLQPVLQRLAGPGIDAADLYFQSIVSESWLLEDGIVKEGGFHL 64
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F YS+ I+ L A ++ RSI+ + G+++ + ++ + L
Sbjct: 65 DQGVGVRALSGEKTGFAYSNAITGEALDLAAQAARSISRSGAEGQVQAFRAVEPAQ--RL 122
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y + + ++ K+ L+++++ R DPR+ +V +L+G ++ L+ DG + AD+
Sbjct: 123 YGQDNPLDVLDRATKVAFLKQLDEATRALDPRIQQVTISLAGVWERTLVAAVDGTLAADV 182
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFT-DMILEKCVSNSVNSALINLEAKPA 499
RPLV+L V++IVE+NGRRE GNSG GGR +Y YF D +V AL+NLEA A
Sbjct: 183 RPLVRLGVSVIVEQNGRRERGNSGGGGRCDYRYFQRDDRALGYAREAVRQALVNLEATAA 242
Query: 500 PAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLA 559
PAG + VVLG GW G+LLHEA+GHGLEGDFNRKGSS +S +G+++AS TIVD+GTL
Sbjct: 243 PAGTLPVVLGAGWSGVLLHEAVGHGLEGDFNRKGSSNYSGQLGRQVASSLCTIVDDGTLP 302
Query: 560 NRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRM 619
+RRGS++IDDEG P+ LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P+PRM
Sbjct: 303 DRRGSLSIDDEGTPSGYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLPMPRM 362
Query: 620 TNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVK 679
TNTYML G+ P EII+SV+ G+Y + GGQVDIT+GKFVF+ ++AY+I+NGK+ PVK
Sbjct: 363 TNTYMLAGQSDPAEIIASVEKGIYCASLGGGQVDITSGKFVFTTNEAYLIENGKLGRPVK 422
Query: 680 GATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
GATLIG+GP ++ +VSM+GND+ LD GVG CGKDGQ +PVGVGQPTLKID+ITVGGT
Sbjct: 423 GATLIGNGPEVMNRVSMVGNDLALDAGVGTCGKDGQSLPVGVGQPTLKIDAITVGGTG 480
>gi|322834696|ref|YP_004214723.1| peptidase U62 modulator of DNA gyrase [Rahnella sp. Y9602]
gi|384259916|ref|YP_005403850.1| protease TldD [Rahnella aquatilis HX2]
gi|321169897|gb|ADW75596.1| peptidase U62 modulator of DNA gyrase [Rahnella sp. Y9602]
gi|380755892|gb|AFE60283.1| protease TldD [Rahnella aquatilis HX2]
Length = 481
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 270/481 (56%), Positives = 358/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L + LL +L + L ILG + + ++DYAD +FQ + +E+W++E+ I+K G+++I
Sbjct: 3 LALVSEQLLTANNLSHQDLFSILGQLSERRLDYADLFFQSSFHESWVIEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D I+ N L + + RSI +Q NGK + +I SL
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQITLNALNLSATAARSIVRDQGNGKAH---TLGEIAYKSL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
YS D + S++ KI+LL RV+KIAR D RV +V A+++G Y+ IL+ DG + ADI
Sbjct: 120 YSPLDPLQSLSREAKIELLHRVDKIARAADKRVQEVSASITGVYENILVAATDGTLAADI 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLE 495
RPLV+L V+++VE++GRRE G+SG GGR Y+YF + + E ++V AL+NL
Sbjct: 180 RPLVRLSVSVLVEQDGRRERGSSGGGGRVGYDYFLETVNGEVRAEAFARDAVRMALLNLT 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +GKR+AS+ T+VD+
Sbjct: 240 AVAAPAGGMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGKRVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTL RGS+ IDDEG P Q LIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTLPGLRGSLAIDDEGVPGQYNVLIENGVLKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK PE+IISSV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+ G+IT
Sbjct: 360 MPRMTNTYMLAGKSTPEDIISSVEFGLYAPNFGGGQVDITSGKFVFSTSEAYLIEKGRIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KPVKGATLIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|417844829|ref|ZP_12490868.1| Protein tldD [Haemophilus haemolyticus M21639]
gi|341956309|gb|EGT82739.1| Protein tldD [Haemophilus haemolyticus M21639]
Length = 482
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 253/481 (52%), Positives = 345/481 (71%), Gaps = 5/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN + LL P +L K LL I M +DYAD YFQ +++E+W+LE+GI+K G F I
Sbjct: 2 LNQVSNTLLTPSNLSTKALLNIFDMMSHRNIDYADLYFQLSQDESWVLEDGIIKEGGFHI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVGVRA+SG+KT F Y+D I+ +L ++ + IA G + + + Y
Sbjct: 62 DRGVGVRAVSGEKTGFAYADQINLASLQQCAEAVKGIAQVKQGNLISPSAFNVVNPIARY 121
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + S+ +KI+LL V++ AR +D RV +V A+LS Y+ +L+ DG + ADIR
Sbjct: 122 AAINPLESLTKEKKIELLHLVDRTARAEDHRVTRVSASLSSVYEEVLVMATDGTLAADIR 181
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLEA 496
PLV+L ++++VE+NG+RE G+ G GGR ++F ++I + +V AL+NL A
Sbjct: 182 PLVRLSISVLVEENGKRERGSCGSGGRLGLDWFFEVIDGDIRAVRFAKEAVRQALVNLSA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS F+ IG+++ S TIVD+G
Sbjct: 242 VAAPAGLMPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSLFTGKIGEQVTSPLCTIVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS+ IDDEG P+QC LI++GIL+GYMQD MNARLM + TGN RRES+AH+P+
Sbjct: 302 TIENRRGSLTIDDEGVPSQCNVLIKDGILQGYMQDKMNARLMGVVPTGNGRRESYAHLPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ +++I+SV+ G+YA +F GGQVDIT+GKFVFS S+AY+I+ GKIT
Sbjct: 362 PRMTNTYMLAGQSQFDDLIASVEQGIYAPHFGGGQVDITSGKFVFSTSEAYLIEKGKITK 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G +++K+SM+ + +LD G+GVCGK+GQ VPVGVGQP LKID ITVGGT
Sbjct: 422 PVKGATLIGSGIEVMQKISMVADKSELDLGIGVCGKEGQSVPVGVGQPALKIDEITVGGT 481
Query: 737 N 737
N
Sbjct: 482 N 482
>gi|429212942|ref|ZP_19204107.1| putative tldD protein [Pseudomonas sp. M1]
gi|428157424|gb|EKX03972.1| putative tldD protein [Pseudomonas sp. M1]
Length = 480
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 266/473 (56%), Positives = 349/473 (73%), Gaps = 9/473 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P LD L IL + +D AD YFQ +E+W+LE+GIVK G+F ++QGVGVR
Sbjct: 12 LLAPGGLDVDGLQPILHELSGPGIDAADLYFQSQVSESWMLEDGIVKEGSFHMDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
A SG+KT F YS+ I+ + L A + RSI+ NG+++ K + + LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAITPDALSQAALAARSISRAGQNGRVQAFKAVAPTR---LYAGENPL 128
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
++ EK++LL++++ R DPR+ +V +L+G ++ +LI DG + ADIRPLV+
Sbjct: 129 DVLSRAEKVELLKKIDAATRALDPRIQQVTVSLAGVWEQVLIAAADGSLAADIRPLVRFN 188
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVS---NSVNSALINLEAKPAPAGIM 504
V++IVE+NGRRE G G GGR +Y YF + ++ +S ++ AL+NLEA PAPAG +
Sbjct: 189 VSVIVEQNGRRERGGHGGGGRTDYRYF--LSEDRAMSYAREALRQALVNLEAVPAPAGTL 246
Query: 505 KVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGS 564
VV+G GW G+LLHEA+GHGLEGDFNRKGSSA+S IG+++AS TIVD+GTLA RRGS
Sbjct: 247 PVVMGAGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRIGEKVASSLCTIVDDGTLAGRRGS 306
Query: 565 INIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYM 624
+++DDEG PTQ LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYM
Sbjct: 307 LSVDDEGTPTQYNVLIENGILKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYM 366
Query: 625 LNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLI 684
L G+ P EII+SV+ G+Y N GGQVDIT+GKFVF+ S+AY+I+NGKIT PVKGATLI
Sbjct: 367 LAGQSDPAEIIASVEKGIYCANLGGGQVDITSGKFVFATSEAYLIENGKITRPVKGATLI 426
Query: 685 GHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
G+GP ++ +VSM+GNDM LD GVG CGKDGQ VPVGVGQPTLKID ITVGGT
Sbjct: 427 GNGPEVMSRVSMVGNDMALDSGVGTCGKDGQSVPVGVGQPTLKIDGITVGGTG 479
>gi|114564883|ref|YP_752397.1| C69 family peptidase [Shewanella frigidimarina NCIMB 400]
gi|114336176|gb|ABI73558.1| microcin-processing peptidase 2. Unknown type peptidase. MEROPS
family U62 [Shewanella frigidimarina NCIMB 400]
Length = 482
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 262/480 (54%), Positives = 353/480 (73%), Gaps = 10/480 (2%)
Query: 263 NIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSIN 322
+ +S+L + LD L L + ++ +D++D YFQ ++E+W+LE+GIVK G+F I
Sbjct: 6 QVEQSLLQDGLTLDG--LQGYLNTIHQHNIDFSDLYFQACRHESWVLEDGIVKEGSFHIE 63
Query: 323 QGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYS 382
+GVGVRAI+G+KT F Y+D+I+ L A K+ R IA S G+ ++ K+ + LY
Sbjct: 64 RGVGVRAITGEKTGFAYADEITPAALDAAAKAARGIA--SAGEQHKVQAFKRQTAHKLYD 121
Query: 383 FTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRP 442
D I++++ +KI LL++ + R D R+I+V+ +LSG ++ ILI +DG + ADIRP
Sbjct: 122 SADPIAAMDEVKKIDLLKQADAYIRSLDSRIIQVVVSLSGVHEEILIAASDGTLAADIRP 181
Query: 443 LVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF---TDMILEKC---VSNSVNSALINLEA 496
LV+ ++I+E G+RE G++G GGR++Y+ F D L + +V A +N+ A
Sbjct: 182 LVRFNCSVILEDKGKRERGSAGGGGRHDYSAFLATDDAGLPQSFEFAREAVRQAQVNVNA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSSAFS +G+++AS +TIVD+G
Sbjct: 242 IDAPAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKGSSAFSGKMGQQVASTLVTIVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL NRRGS++IDDEG P+Q TTLIENGILKGYMQD +NARLM TGN RRES+AH+P+
Sbjct: 302 TLENRRGSLSIDDEGVPSQKTTLIENGILKGYMQDKLNARLMGQEPTGNGRRESYAHLPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYM G+ +P +II SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I++G++T
Sbjct: 362 PRMTNTYMNAGESNPADIIKSVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIEDGEVTQ 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
+KGATLIG+GP + +SM+GND+ LD GVGVCGKDGQ VPVGVGQPTLKID +TVGGT
Sbjct: 422 AIKGATLIGNGPEAMGLISMVGNDLALDKGVGVCGKDGQSVPVGVGQPTLKIDRLTVGGT 481
>gi|345430378|ref|YP_004823499.1| peptidase [Haemophilus parainfluenzae T3T1]
gi|301156442|emb|CBW15913.1| predicted peptidase [Haemophilus parainfluenzae T3T1]
Length = 482
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 252/474 (53%), Positives = 339/474 (71%), Gaps = 5/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P +L + LL I M +DYAD YFQ +++E+W+LE+ I+K G F I++GVGVR
Sbjct: 9 LLAPSNLSHQSLLNIFDVMSHRHIDYADLYFQLSQDESWVLEDSIIKEGGFHIDRGVGVR 68
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+SG+KT F YSD I+ +L ++ + IA G + + + Y+ + +
Sbjct: 69 AVSGEKTGFAYSDQINLASLQQCAEAVKGIAQIKEGNLISPQAFNAVNAVQRYAAINPLE 128
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
S++ +KI+LL V++ AR +DPRV V A LS Y+ +L+ DG + ADIRPLV+L +
Sbjct: 129 SLSKEKKIELLHLVDRTARAEDPRVTHVSAALSSIYEEVLVVATDGTLAADIRPLVRLSI 188
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEAKPAPAGI 503
+++VE++G+RE G+ G GGR+ ++F D+ +V AL+NL A APAG+
Sbjct: 189 SVLVEEDGKRERGSCGSGGRFGLDWFFEVVNGDIRAVNFAKEAVRQALVNLSAVAAPAGL 248
Query: 504 MKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRG 563
M VVLG GWPG+LLHEA+GHGLEGDFNRK SS F+ IG+ + S TIVD+GTL NRRG
Sbjct: 249 MPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSLFTGKIGELVTSPLCTIVDDGTLQNRRG 308
Query: 564 SINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTY 623
S+ IDDEG P+QC LI++GIL+GYMQD +NARLM + TGN RRES+AH+P+PRMTNTY
Sbjct: 309 SLTIDDEGVPSQCNVLIKDGILQGYMQDKLNARLMGVKPTGNGRRESYAHLPMPRMTNTY 368
Query: 624 MLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATL 683
ML G+ E++++SV G+YA +F GGQVDIT+GKFVFS S+AY+I+ GKIT PVKGATL
Sbjct: 369 MLAGQSKFEDLVASVDRGIYAPHFGGGQVDITSGKFVFSTSEAYLIEKGKITKPVKGATL 428
Query: 684 IGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
IG G ++++KVSM+ ++ LD G+GVCGKDGQ VPVGVGQP LKID ITVGGTN
Sbjct: 429 IGSGIDVMQKVSMVADETDLDLGIGVCGKDGQSVPVGVGQPALKIDEITVGGTN 482
>gi|332532334|ref|ZP_08408214.1| TldD protein, part of proposed TldE/TldD proteolytic complex
[Pseudoalteromonas haloplanktis ANT/505]
gi|332038201|gb|EGI74647.1| TldD protein, part of proposed TldE/TldD proteolytic complex
[Pseudoalteromonas haloplanktis ANT/505]
Length = 479
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 261/480 (54%), Positives = 355/480 (73%), Gaps = 7/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N LL+ L+ + L K L + ++KVDYAD YFQ + +E+W+LE+G+VK G++++
Sbjct: 1 MNSVEQHLLQDSQLNREELEKTLAYIHQHKVDYADLYFQSSHHESWVLEDGLVKEGSYNV 60
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+GVGVRA+SG+KT F YSD I+ L A + RSIA+ G+ + IK +K +
Sbjct: 61 ERGVGVRAVSGEKTGFSYSDAINLEALNKAATAARSIADA--GEDRAIKVFSDVKAKEQF 118
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ ISS++ +K+ LL +E R P +VI+++S Y+ +LI +DG DIR
Sbjct: 119 AAHQPISSMSDTDKVGLLRELENYIRELAPDAEQVISSMSAVYEEVLIAASDGTFATDIR 178
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEK-----CVSNSVNSALINLEA 496
PL++L ++++EKNGRRE G +G G R +Y YF +++ K +V A +NLEA
Sbjct: 179 PLIRLNCSVLLEKNGRRERGGAGGGARLDYGYFKELVDGKPRWMEFAEEAVRQAKVNLEA 238
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M+VVLG GWPG+LLHEA+GHGLEGDFNRKG+SAFS +G+++AS+ T+VD+G
Sbjct: 239 IDAPAGTMEVVLGNGWPGVLLHEAVGHGLEGDFNRKGASAFSGKVGQKVASELCTVVDDG 298
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+A+RRGS+N+DDEG P LIENGILKGYMQD +NARLM ++ TGNARRES+AH+P+
Sbjct: 299 TMADRRGSLNVDDEGTPAAYNVLIENGILKGYMQDKLNARLMGVNPTGNARRESYAHLPM 358
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ +IISSVK G++A NF GGQVDIT+GKFVFSAS+AY+I+NG+IT
Sbjct: 359 PRMTNTYMLGGEHSQADIISSVKKGVFAPNFGGGQVDITSGKFVFSASEAYLIENGRITQ 418
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG+GP +++++SM+GND+ LD GVGVCGKDGQ VPVGVGQP+LKID +TVGGT
Sbjct: 419 PIKGATLIGNGPEVMQQISMVGNDLALDKGVGVCGKDGQSVPVGVGQPSLKIDQLTVGGT 478
>gi|296104958|ref|YP_003615104.1| putative protease TldD [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295059417|gb|ADF64155.1| putative protease TldD [Enterobacter cloacae subsp. cloacae ATCC
13047]
Length = 481
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 255/481 (53%), Positives = 356/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEHLLAANGLSHQDLFSILGQLTERRLDYGDLYFQSSYHESWVLEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSL 380
+QGVGVRAISG+KT F Y+D IS L + ++ R+I + +G++K + ++ +L
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLAALEQSAQAARTIVRDAGDGRVKTLGEVQHA---AL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTSIDPLQSMSREEKLDILRRVDKVARAADKRVQEVSASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLE 495
RPLV+L +++ VE++G+RE G+SG GGR+ Y++F + + +V A++NL
Sbjct: 180 RPLVRLSISVQVEEDGKRERGSSGGGGRFGYDWFLGDVDGEARADAWAKEAVRMAMVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG+ ++S+ T+VD+
Sbjct: 240 AVAAPAGTFPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQIGQLVSSELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGSI+IDDEG P Q LIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTMVDRRGSISIDDEGTPGQYNVLIENGVLKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G+ P+EII SV G++A NF GGQVDIT+GKFVFS S+AY+I+ GK+T
Sbjct: 360 MPRMTNTYMLPGQSTPQEIIESVDYGIFAPNFGGGQVDITSGKFVFSTSEAYLIEKGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
VKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KAVKGATLIGSGIEAMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|407803700|ref|ZP_11150533.1| TldD protein [Alcanivorax sp. W11-5]
gi|407022303|gb|EKE34057.1| TldD protein [Alcanivorax sp. W11-5]
Length = 506
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 249/476 (52%), Positives = 348/476 (73%), Gaps = 3/476 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L +A +LL P L + L ++L VDYAD YFQ +++E W+LE+G+V+ ++++
Sbjct: 32 LKVAEQVLLAPAQLTDTALNRLLSATLAPGVDYADLYFQHSRHEGWVLEDGVVRDASYNL 91
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+G GVR ISGD+T F YSD+I+ L A + R+IA +G +K + SLY
Sbjct: 92 ERGTGVRVISGDRTGFAYSDEIALPALDRATGAARAIAR--SGGQGTAPALKAVTAPSLY 149
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
D +++ + K+ LER++K+AR DP V +V +L+ ++V+L+ DG + AD+R
Sbjct: 150 GAFDPLATWPAQRKVAFLERLDKLARSLDPAVTEVTVSLNAVHEVMLVAATDGTLAADVR 209
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAP 500
PLV+L +++ E+NGRRE G+SG GGR +Y++ E V ++V AL+NLEA+PAP
Sbjct: 210 PLVRLGISVQAERNGRRERGSSGGGGRVDYDWLEAGGRAEGWVRDAVRQALVNLEAQPAP 269
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG M VVLGPGWPG+LLHEA+GHGLEGDFNRKG+S F+ +G+++AS T+VD+GTL
Sbjct: 270 AGTMPVVLGPGWPGVLLHEAVGHGLEGDFNRKGTSMFARRMGEQVASNLCTVVDDGTLLG 329
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+N+DDEG PT CTTLIENG L G+MQD +NARL +TGN RRES+AH+P+PRMT
Sbjct: 330 RRGSLNVDDEGTPTSCTTLIENGRLVGHMQDKLNARLTGQRLTGNGRRESYAHLPMPRMT 389
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYML GK P +I++S++ G+YA NF GGQVDIT+G+FVFS S+AY+++ G+I PV+G
Sbjct: 390 NTYMLPGKDDPADIVASLERGIYAVNFGGGQVDITSGRFVFSTSEAYLVEKGRIVAPVRG 449
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
ATLIG G +++ +SM+GND+ LD G+GVCGK+GQ VPVGVGQPTL+I+++TVGGT
Sbjct: 450 ATLIGSGAEVMQAISMVGNDLALDTGIGVCGKEGQSVPVGVGQPTLRIEALTVGGT 505
>gi|261342695|ref|ZP_05970553.1| TldD protein [Enterobacter cancerogenus ATCC 35316]
gi|288315347|gb|EFC54285.1| TldD protein [Enterobacter cancerogenus ATCC 35316]
Length = 481
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 254/481 (52%), Positives = 355/481 (73%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEHLLAANGLSHQDLFSILGQLTERRLDYGDLYFQSSYHESWVLEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D IS L + ++ R+I + +G++K + I+ ++L
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQISLAALEQSAQAARTIVRDTGDGRVKTLGEIQH---SAL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTSIDPLQSMSREEKLDILRRVDKVARAADKRVQEVSASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLE 495
RPLV+L +++ VE +G+RE G+SG GGR+ Y++F + + +V A++NL
Sbjct: 180 RPLVRLSISVQVEDDGKRERGSSGGGGRFGYDWFLGDVDGEARADAWAKEAVRMAMVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ ++S+ T+VD+
Sbjct: 240 AVAAPAGTFPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGQLVSSELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGS+ IDDEG P Q LIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTMVDRRGSVAIDDEGTPGQYNVLIENGVLKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G+ P+EII SV G++A NF GGQVDIT+GKFVFS S+AY+I+ GK+T
Sbjct: 360 MPRMTNTYMLPGQSTPQEIIESVDYGIFAPNFGGGQVDITSGKFVFSTSEAYLIEKGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
VKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+DS+TVGG
Sbjct: 420 KAVKGATLIGSGIEAMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDSLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|304414162|ref|ZP_07395530.1| protease [Candidatus Regiella insecticola LSR1]
gi|304283376|gb|EFL91772.1| protease [Candidatus Regiella insecticola LSR1]
Length = 511
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 275/507 (54%), Positives = 359/507 (70%), Gaps = 23/507 (4%)
Query: 245 INQVKNCILISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKN 304
INQ K S KN+ ++++ LL P L + L IL + + +DYAD YFQ + +
Sbjct: 12 INQTK-----SDKNMSLISVSDQ-LLTPNTLTHQDLFSILSQLTERALDYADLYFQSSYH 65
Query: 305 ENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNG 364
E W+LE+ ++K G++ I+QGVGVRAISG+KT F Y+D IS L + ++ RSI + NG
Sbjct: 66 EAWVLEDRLIKEGSYHIDQGVGVRAISGEKTGFAYADQISLKALQQSAQAARSIVKE-NG 124
Query: 365 KIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEY 424
+I ++K+ S Y D +++ + +KI LL RV+++AR D RV +V A+L+G Y
Sbjct: 125 TSQI-PLLRKVSYPSRYPSLDPLTNYDCEKKIALLRRVDEVARAVDKRVKEVTASLTGVY 183
Query: 425 DVILITRNDGLIVADIRPLVQLFVTIIVEK-NGRREIGNSGCGGRYNYNYFTDMI----- 478
++IL+ DG + AD+RPLV+L V ++VE NG+RE G+ G GGR +Y+YF + +
Sbjct: 184 ELILVAATDGTLAADVRPLVRLSVNVLVEDANGKRERGSCGGGGRCSYDYFFESVDGEER 243
Query: 479 LEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFS 538
+ +V AL+NL+A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+GSS FS
Sbjct: 244 ADTFAKEAVRIALVNLDAVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGSSVFS 303
Query: 539 NCIGKRIASKEITIVDNGTLANR---------RGSINIDDEGNPTQCTTLIENGILKGYM 589
IGK + S+ T+VD+GTL + RGS+ IDDEG PTQ LIENGILKGYM
Sbjct: 304 GKIGKMVTSELCTVVDDGTLCTKFDDDTLFGHRGSLAIDDEGVPTQRNILIENGILKGYM 363
Query: 590 QDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSG 649
QD +NARLM M TGN RRES+AH+P+PRMTNTYML G+ PEEII SV+ GLYA NFSG
Sbjct: 364 QDKLNARLMRMEATGNGRRESYAHLPMPRMTNTYMLAGRSTPEEIIESVEYGLYAPNFSG 423
Query: 650 GQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGV 709
GQVDIT+GKFVFS S+AY+IKNGK T VKGATLIG G ++K+SM+GND+ D G+GV
Sbjct: 424 GQVDITSGKFVFSTSEAYLIKNGKKTQAVKGATLIGSGIEAMQKISMVGNDLAFDKGIGV 483
Query: 710 CGKDGQMVPVGVGQPTLKIDSITVGGT 736
CGKDGQ VPVGVGQPTLK+D++TVGGT
Sbjct: 484 CGKDGQSVPVGVGQPTLKVDNLTVGGT 510
>gi|50120207|ref|YP_049374.1| suppressor of the inhibitory activity of the carbon storage
regulator CsrA [Pectobacterium atrosepticum SCRI1043]
gi|49610733|emb|CAG74178.1| putative suppressor of the inhibitory activity of the carbon
storage regulator CsrA [Pectobacterium atrosepticum
SCRI1043]
Length = 481
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 249/479 (51%), Positives = 343/479 (71%)
Query: 259 IHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGN 318
IH S L F L+ + L ++ + +VDYAD YFQ + E W LE GIV+
Sbjct: 3 IHASRAPVSPALSAFSLETTEITHALNHIMQRQVDYADLYFQRRQQEGWQLENGIVRPTG 62
Query: 319 FSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKIN 378
FS +QGVGVRA+SG+KTAF Y++D+ ++ A + R I+ + +
Sbjct: 63 FSRDQGVGVRAVSGEKTAFSYTNDLRPQAILQAANTVREISRRGQSASVALPASLPHGTT 122
Query: 379 SLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVA 438
+LY + + ++ K +LL +++ AR +DPRV +V A L+ ++ ILI R+DG +
Sbjct: 123 ALYPSDNPLLAVTEEHKRQLLLSIDRQARARDPRVSQVTAYLNASHETILIARHDGRLAT 182
Query: 439 DIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKP 498
D+RPLV L + ++VE+ GRRE G+SG G R +Y +F D + + V+ +V+ AL NL+A
Sbjct: 183 DVRPLVNLVINVVVEQQGRRENGSSGGGRRLDYRFFADETVSQWVNQAVDQALNNLDASS 242
Query: 499 APAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL 558
PAG V+LG G PGILLHEAIGHGLEGDFNRKGSSAFS+ +G+R+A+ IT+VD+GTL
Sbjct: 243 VPAGTYSVILGAGSPGILLHEAIGHGLEGDFNRKGSSAFSSLLGERVAAPGITVVDDGTL 302
Query: 559 ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPR 618
ANRRGS+++DDEG P+QCTTLIE+GIL+GY+QD +NARLMN ++TGNARR S++ +P+PR
Sbjct: 303 ANRRGSLHVDDEGTPSQCTTLIEDGILRGYLQDSLNARLMNTALTGNARRASYSALPLPR 362
Query: 619 MTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPV 678
MTNTYML G++ EE+I+SVKNGLYA F GGQVDI++GK+VFS ++AY+I+NG++T PV
Sbjct: 363 MTNTYMLAGQYPAEEVIASVKNGLYAVGFGGGQVDISSGKYVFSTTEAYLIENGRVTRPV 422
Query: 679 KGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
KGATLIGHGP L V+M+GND+ LD G C K+GQ +PV VGQPTL+ID++TVGG+
Sbjct: 423 KGATLIGHGPEALLHVAMVGNDLALDDGNIACTKEGQSLPVSVGQPTLRIDNMTVGGSQ 481
>gi|329123263|ref|ZP_08251831.1| U62 family peptidase 2 TldD [Haemophilus aegyptius ATCC 11116]
gi|327471472|gb|EGF16920.1| U62 family peptidase 2 TldD [Haemophilus aegyptius ATCC 11116]
Length = 482
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 253/481 (52%), Positives = 345/481 (71%), Gaps = 5/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN + LL P +L + LL I M +DYAD YFQ +++E+W+LE+GI+K G F I
Sbjct: 2 LNQVSNTLLTPSNLSTQTLLNIFDIMSHRNIDYADLYFQLSQDESWVLEDGIIKEGGFHI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVGVRA+SG+KT F Y+D I+ +L ++ + IA G + + + Y
Sbjct: 62 DRGVGVRAVSGEKTGFAYADQINLASLQQCAEAVKGIAQVKQGNLISPSAFNVVNPIARY 121
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + S+ +KI+LL V++ AR +D RV KV A+LS Y+ +LI DG + ADIR
Sbjct: 122 AAINPLESLTKEKKIELLHLVDRTARAEDHRVTKVSASLSSVYEEVLIMATDGTLAADIR 181
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKC-----VSNSVNSALINLEA 496
PLV+L ++++VE+N +RE G+ G GGR+ ++F +++ +V AL+NL A
Sbjct: 182 PLVRLSISVLVEENRKRERGSCGSGGRFGLDWFFEVVDGDIRAVLFAKEAVRQALVNLSA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS F+ IG+++ S TIVD+G
Sbjct: 242 VAAPAGLMPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSLFTGKIGEQVTSPLCTIVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS+ IDDEG P+QC LI++GIL+GYMQD MNARLM ++ TGN RRES+AH+P+
Sbjct: 302 TIENRRGSLTIDDEGVPSQCNVLIKDGILQGYMQDKMNARLMGVAPTGNGRRESYAHLPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ +++I+SVK G+YA +F GGQVDIT+GKFVFS S+AY+I+ GKIT
Sbjct: 362 PRMTNTYMLAGQSQFDDLIASVKQGIYAPHFGGGQVDITSGKFVFSTSEAYLIEKGKITK 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G +++K+SM+ + +LD G+GVCGK+GQ VPVGVGQP LKID ITVGGT
Sbjct: 422 PVKGATLIGSGIEVMQKISMVADKSELDLGIGVCGKEGQSVPVGVGQPALKIDEITVGGT 481
Query: 737 N 737
N
Sbjct: 482 N 482
>gi|385786919|ref|YP_005818028.1| protease TldD [Erwinia sp. Ejp617]
gi|310766191|gb|ADP11141.1| protease TldD [Erwinia sp. Ejp617]
Length = 481
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 261/481 (54%), Positives = 349/481 (72%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL ++ + L +LG + + ++DYAD YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLTANNVSQSDLFSVLGQLSERRLDYADLYFQSSFHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSL 380
+QGVGVRAISG+KT F Y+D I+ N L + + RSI Q NG+ + + + +L
Sbjct: 63 DQGVGVRAISGEKTGFAYADQITLNALHQSATAARSIVREQGNGQSRTLAAVVN---RAL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y D + S+ EKI LL RV+ AR D RV +V A+L+G Y+ +L+ DG + AD+
Sbjct: 120 YPALDPLQSLTREEKIALLHRVDSAARAADKRVQEVSASLTGVYEQVLVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V++ VE NG+RE G+SG GGR+ Y +F ++ E +V AL+NLE
Sbjct: 180 RPLVRLSVSVQVEDNGKRERGSSGGGGRFGYEFFLADEAGEVRAEAWAREAVRMALVNLE 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGSIPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGQLVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ RGS+ IDDEG P Q LIE GILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTIDGLRGSLAIDDEGVPGQYNVLIEKGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G+ P+EII SV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLAGQSTPQEIIESVEYGLYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK+D +TVGG
Sbjct: 420 KPVKGATLIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLDKLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|312170845|emb|CBX79105.1| Protease tldD [Erwinia amylovora ATCC BAA-2158]
Length = 495
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 263/493 (53%), Positives = 355/493 (72%), Gaps = 10/493 (2%)
Query: 251 CILIS-QKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWIL 309
C LI ++ LN+ LL ++ + L +LG + + K+DYAD YFQ + +E+W+L
Sbjct: 5 CGLIHIKREFMSLNLVSEQLLTANNVSQSDLFSLLGQLSERKLDYADLYFQSSFHESWVL 64
Query: 310 EEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKI 368
E+ I+K G+++I+QGVGVRA+SG+KT F Y+D I+ N L + + RSI Q NG+ +
Sbjct: 65 EDRIIKDGSYNIDQGVGVRAVSGEKTGFAYADQITLNALHQSATAARSIVREQGNGQSRT 124
Query: 369 IKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVIL 428
+ + + Y D + S++ EKI LL RV+ AR D RV +V A+L+G Y+ +L
Sbjct: 125 LAAVVN---RARYPALDPLHSLSREEKIALLHRVDSAARAADKRVQEVSASLTGVYEQVL 181
Query: 429 ITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCV 483
+ DG + AD+RPLV+L +++ VE NG+RE G+SG GGR+ Y +F ++ E
Sbjct: 182 VAATDGTLAADVRPLVRLSISVQVEDNGKRERGSSGGGGRFGYEFFLANEAGEVRAEAWA 241
Query: 484 SNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGK 543
+V AL+NL A APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+
Sbjct: 242 REAVRMALVNLGAVAAPAGSIPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGQ 301
Query: 544 RIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSIT 603
R+AS+ T+VD+GT+ RGS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ T
Sbjct: 302 RVASELCTVVDDGTIDGLRGSLAIDDEGVPGQYNVLIENGILKGYMQDKLNARLMGVAPT 361
Query: 604 GNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSA 663
GN RRES+AH+P+PRMTNTYML G+ P+EII SV+ GLYA NF GGQVDIT+GKFVFS
Sbjct: 362 GNGRRESYAHLPMPRMTNTYMLAGQSTPQEIIESVEYGLYAPNFGGGQVDITSGKFVFST 421
Query: 664 SKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQ 723
S+AY+I+NGK+T PVKGATLIG G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQ
Sbjct: 422 SEAYLIENGKVTKPVKGATLIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQ 481
Query: 724 PTLKIDSITVGGT 736
PTLK+D +TVGGT
Sbjct: 482 PTLKLDKLTVGGT 494
>gi|403056707|ref|YP_006644924.1| protease TldD [Pectobacterium carotovorum subsp. carotovorum PCC21]
gi|402804033|gb|AFR01671.1| protease TldD [Pectobacterium carotovorum subsp. carotovorum PCC21]
Length = 481
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 253/469 (53%), Positives = 348/469 (74%), Gaps = 9/469 (1%)
Query: 273 FDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISG 332
+LD+ L +LG++ + ++DYAD YFQ + +E+W+LE+ I+K G+++I+QGVG+RAI G
Sbjct: 16 LNLDD--LSAVLGSLNERRLDYADLYFQSSYHESWVLEDRIIKDGSYNIDQGVGIRAIDG 73
Query: 333 DKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINI 392
+KT F Y+D I+ N L + ++ RSI + + + ++LY + + S+
Sbjct: 74 EKTGFAYADQITLNALHQSAQAARSIVREQG--TGTAHTLGAVSHHALYPTLNPLDSLTR 131
Query: 393 REKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIV 452
+KI LL+R + +AR D RV +V A+L+G Y+++L+ DG + AD+RPLV+L ++++V
Sbjct: 132 EDKIALLQRADTVARAADARVQEVSASLTGVYELVLVAATDGTLAADVRPLVRLSISVLV 191
Query: 453 EKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLEAKPAPAGIMKVV 507
E G+RE G+SG G R Y+YF ++ ++ +V AL+NL A APAG M VV
Sbjct: 192 EAEGKRERGSSGGGMRGGYDYFWEVADGEARVDAWAKEAVRMALVNLSAVAAPAGPMPVV 251
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LG GWPG+LLHEA+GHGLEGDFNR+G+S FS +GK +AS+ T+VD+GTL RRGS+++
Sbjct: 252 LGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGKLVASELCTVVDDGTLTGRRGSLSM 311
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML G
Sbjct: 312 DDEGVPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNTYMLAG 371
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
K PEEIISSV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+ G+IT PVKGATLIG G
Sbjct: 372 KSTPEEIISSVEYGLYAPNFGGGQVDITSGKFVFSTSEAYLIEKGRITTPVKGATLIGSG 431
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK++S+TVGGT
Sbjct: 432 IEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLESLTVGGT 480
>gi|157963559|ref|YP_001503593.1| peptidase U62 modulator of DNA gyrase [Shewanella pealeana ATCC
700345]
gi|157848559|gb|ABV89058.1| peptidase U62 modulator of DNA gyrase [Shewanella pealeana ATCC
700345]
Length = 493
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 264/481 (54%), Positives = 355/481 (73%), Gaps = 12/481 (2%)
Query: 263 NIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSIN 322
+ +S+L + LD+ L L + ++++D++D YFQ +++E+W+LE+GIVK G+F I
Sbjct: 17 QVGQSLLQDGLALDD--LQSYLKQIHQHQIDFSDLYFQGSRHESWVLEDGIVKDGSFHIE 74
Query: 323 QGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSN-GKIKIIKNIKKIKINSLY 381
+GVGVRAI+G+KT F Y+D+I+ L A + R IA GK+ K + +LY
Sbjct: 75 RGVGVRAITGEKTGFAYADEITPAALEAAATAARGIAIAGGEGKVNAWKQQQS---KALY 131
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+D I+++ +KI+LL++ + R D R+I+V+ +LSG ++ IL+ +DG + ADIR
Sbjct: 132 ISSDPIAAMEEVKKIELLKQADVYIRSLDSRIIQVVVSLSGVHEEILVAASDGTLAADIR 191
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF---TDMILEKC---VSNSVNSALINLE 495
PLV+ ++I+E +G+RE G SG GGR++Y+ D L C +V A +NL
Sbjct: 192 PLVRFNCSVILEDDGKRERGASGGGGRHDYSVLLEDGDDGLPYCFGFAREAVRQAQVNLL 251
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSSAFS +G+++AS+ +T+VD+
Sbjct: 252 AIDAPAGEMPVVLGAGWPGVLLHEAVGHGLEGDFNRKGSSAFSGKVGQQVASELVTVVDD 311
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ANRRGS++IDDEG PTQ T LIENGILKGYMQD +NARLM TGN RRES+AH+P
Sbjct: 312 GTIANRRGSLSIDDEGVPTQKTVLIENGILKGYMQDKLNARLMGEQSTGNGRRESYAHLP 371
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYM G+ P EII SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NG+IT
Sbjct: 372 MPRMTNTYMEAGESDPAEIIKSVKKGVYAPNFGGGQVDITSGKFVFSASEAYLIENGEIT 431
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
P+KGATLIG+GP + ++SM+GND+ LD GVGVCGKDGQ VPVGVGQPTLK+D +TVGG
Sbjct: 432 QPIKGATLIGNGPESMSQISMVGNDLALDKGVGVCGKDGQSVPVGVGQPTLKLDKLTVGG 491
Query: 736 T 736
T
Sbjct: 492 T 492
>gi|419958789|ref|ZP_14474849.1| protease TldD [Enterobacter cloacae subsp. cloacae GS1]
gi|388606306|gb|EIM35516.1| protease TldD [Enterobacter cloacae subsp. cloacae GS1]
Length = 481
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 254/481 (52%), Positives = 356/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEHLLAANGLSHQDLFSILGQLTERRLDYGDLYFQSSYHESWVLEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D IS L + ++ R+I + +G++K + ++ +L
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQISLAALEQSAQAARTIVRDTGDGRVKTLGEVQHA---AL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+L+G Y++IL+ DG + AD+
Sbjct: 120 YTSIDPLQSMSREEKLDILRRVDKVARAADKRVQEVSASLTGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLE 495
RPLV+L +++ VE +G+RE G+SG GGR+ Y++F + + +V AL+NL
Sbjct: 180 RPLVRLSISVQVEDDGKRERGSSGGGGRFGYDWFLGDVDGEARADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ ++S+ T+VD+
Sbjct: 240 AVAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGQLVSSELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGSI+IDDEG P Q LIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTMLDRRGSISIDDEGTPGQYNVLIENGVLKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV G++A NF GGQVDIT+GKFVFS S+AY+I+ GK+T
Sbjct: 360 MPRMTNTYMLPGKSTPQEIIESVDYGIFAPNFGGGQVDITSGKFVFSTSEAYLIEKGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
VKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KAVKGATLIGSGIEAMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|229846885|ref|ZP_04466992.1| TldD [Haemophilus influenzae 7P49H1]
gi|229810374|gb|EEP46093.1| TldD [Haemophilus influenzae 7P49H1]
Length = 482
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 253/481 (52%), Positives = 345/481 (71%), Gaps = 5/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN + LL P +L + LL I M +DYAD YFQ +++E+W+LE+GI+K G F I
Sbjct: 2 LNQVSNTLLTPSNLSIQTLLNIFDIMSHRNIDYADLYFQLSQDESWVLEDGIIKEGGFHI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVGVR +SG+KT F Y+D I+ +L ++ + IA G + + + Y
Sbjct: 62 DRGVGVRVVSGEKTGFAYADQINLASLQQCAEAVKGIAQVKQGNLISPSAFNVVNPIARY 121
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + S+ +KI+LL V++ AR +D RV KV A+LS Y+ +LI DG + ADIR
Sbjct: 122 AAINPLESLTKEKKIELLHLVDRTARAEDHRVTKVSASLSSVYEEVLIMATDGTLAADIR 181
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKC-----VSNSVNSALINLEA 496
PLV+L ++++VE+NG+RE G+ G GGR+ ++F +++ +V AL+NL A
Sbjct: 182 PLVRLSISVLVEENGKRERGSCGSGGRFGLDWFFEVVDGDIRAVLFAKEAVRQALVNLSA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS F+ IG+++ S TIVD+G
Sbjct: 242 VAAPAGLMPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSLFTGKIGEQVTSPLCTIVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS+ IDDEG P+QC LI++GIL+GYMQD MNARLM ++ TGN RRES+AH+P+
Sbjct: 302 TIENRRGSLTIDDEGVPSQCNVLIKDGILQGYMQDKMNARLMGVAPTGNGRRESYAHLPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ +++I+SVK G+YA +F GGQVDIT+GKFVFS S+AY+I+ GKIT
Sbjct: 362 PRMTNTYMLAGQSQFDDLIASVKQGIYAPHFGGGQVDITSGKFVFSTSEAYLIEKGKITK 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G +++K+SM+ + +LD G+GVCGK+GQ VPVGVGQP LKID ITVGGT
Sbjct: 422 PVKGATLIGSGIEVMQKISMVADKSELDLGIGVCGKEGQSVPVGVGQPALKIDEITVGGT 481
Query: 737 N 737
N
Sbjct: 482 N 482
>gi|284008675|emb|CBA75321.1| modulator of DNA gyrase [Arsenophonus nasoniae]
Length = 481
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 267/474 (56%), Positives = 346/474 (72%), Gaps = 9/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL DL+ + L ++LG++ + +DYAD YFQ + +E W LE+GI+K G+++I+QGVG+R
Sbjct: 10 LLTSNDLNHQHLQEVLGSLAERHLDYADLYFQSSCHEAWGLEDGIIKRGSYNIDQGVGIR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSN-GKIKIIKNIKKIKINSLYSFTDTI 387
AI DKT F Y+D I+ L + K+ RSI NQ GK+ +I + LYS D +
Sbjct: 70 AIRDDKTGFAYADQITLQALQQSAKAARSIVNQGGKGKVGLIN---PVDFEHLYSAIDPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
+++ EKI LL RV+++AR +D RV +V LSG Y+ +LI DG + ADIRPLV+L
Sbjct: 127 QTMSPEEKIALLRRVDQVARAEDHRVQEVDVTLSGVYEHVLIVATDGTLAADIRPLVRLS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEAKPAPAG 502
V+++VE +G+RE SG GGRY Y YF ++ E +V AL+NL A APAG
Sbjct: 187 VSVLVEHDGKRERAGSGGGGRYGYQYFLATEQGEVRAEHYAREAVRIALVNLAAIAAPAG 246
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG+++AS T+VD+ TL R
Sbjct: 247 TMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSIFSGKIGQQVASPLCTVVDDATLVGCR 306
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+ IDDEG P Q LIENGILKGYMQD MNARLM + TGN RRES+AH+P+PRMTNT
Sbjct: 307 GSLAIDDEGVPGQYNVLIENGILKGYMQDKMNARLMGVLPTGNGRRESYAHLPMPRMTNT 366
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML G+ PEEII+SV G+YA NF+GGQVDIT+GKFVFS ++AY+I+ GKI P+KGAT
Sbjct: 367 YMLAGQSTPEEIIASVDRGIYAPNFAGGQVDITSGKFVFSTAEAYLIEKGKIAQPIKGAT 426
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
LIG G ++++SM+GND+KLD G+GVCGK+GQ VPVGVGQPTLK+DSITVGGT
Sbjct: 427 LIGAGKEAMQQISMVGNDLKLDSGIGVCGKEGQSVPVGVGQPTLKLDSITVGGT 480
>gi|148827076|ref|YP_001291829.1| hypothetical protein CGSHiGG_01945 [Haemophilus influenzae PittGG]
gi|148718318|gb|ABQ99445.1| TldD [Haemophilus influenzae PittGG]
Length = 482
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 252/481 (52%), Positives = 347/481 (72%), Gaps = 5/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN + LL P +L + LL I + +DYAD YFQ +++E+W+LE+GI+K G F I
Sbjct: 2 LNQVSNTLLTPSNLSTQTLLNIFDIISHRNIDYADLYFQLSQDESWVLEDGIIKEGGFHI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVGVRA+SG+KT F Y+D I+ +L ++ + IA G + + + Y
Sbjct: 62 DRGVGVRAVSGEKTGFAYADQINLASLQQCAEAVKGIAQVKQGNLISPSAFNVVNPIARY 121
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + S+ +KI+LL V++ AR +D RV KV A+LS Y+ +LI DG + ADIR
Sbjct: 122 AAINPLESLTKEKKIELLHLVDRTARAEDHRVTKVSASLSSVYEEVLIMATDGTLAADIR 181
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKC-----VSNSVNSALINLEA 496
PLV+L ++++VE+NG+RE G+ G GGR+ ++F +++ +V+ AL+NL A
Sbjct: 182 PLVRLSISVLVEENGKRERGSYGSGGRFGLDWFFEVVDGDIRAVLFAKEAVHQALVNLSA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS F+ IG+++ S TIVD+G
Sbjct: 242 VAAPAGLMPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSLFTGKIGEQVTSPLCTIVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS+ IDDEG P+QC LI++GIL+GYMQD MNARLM ++ TGN RRES+AH+P+
Sbjct: 302 TIENRRGSLTIDDEGVPSQCNVLIKDGILQGYMQDKMNARLMGVAPTGNGRRESYAHLPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ +++I+SV+ G+YA +F GGQVDIT+GKFVFS S+AY+I+ GKIT
Sbjct: 362 PRMTNTYMLAGQSQFDDLIASVEQGIYAPHFGGGQVDITSGKFVFSTSEAYLIEKGKITK 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G +++K+SM+ + +LD G+GVCGK+GQ VPVGVGQP LKID ITVGGT
Sbjct: 422 PVKGATLIGSGIEVMQKISMVADKSELDLGIGVCGKEGQSVPVGVGQPALKIDEITVGGT 481
Query: 737 N 737
N
Sbjct: 482 N 482
>gi|259906976|ref|YP_002647332.1| protease TldD [Erwinia pyrifoliae Ep1/96]
gi|387869687|ref|YP_005801057.1| protease tldD [Erwinia pyrifoliae DSM 12163]
gi|224962598|emb|CAX54053.1| Modulator of DNA gyrase [Erwinia pyrifoliae Ep1/96]
gi|283476770|emb|CAY72608.1| Protease tldD [Erwinia pyrifoliae DSM 12163]
Length = 481
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 261/481 (54%), Positives = 349/481 (72%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL ++ + L +LG + + ++DYAD YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLTANNVSQSDLFSVLGQLSERRLDYADLYFQSSFHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSL 380
+QGVGVRAISG+KT F Y+D I+ N L + + RSI Q NG+ + + + +L
Sbjct: 63 DQGVGVRAISGEKTGFAYADQITLNALHQSATAARSIVREQGNGQSRTLAAVVN---RAL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y D + S+ EKI LL RV+ AR D RV +V A+L+G Y+ +L+ DG + AD+
Sbjct: 120 YPALDPLQSLTREEKIALLHRVDSAARAADKRVQEVSASLTGVYEQVLVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V++ VE NG+RE G+SG GGR+ Y +F ++ E +V AL+NLE
Sbjct: 180 RPLVRLSVSVQVEDNGKRERGSSGGGGRFGYEFFLADEAGEVRAEAWAREAVRMALVNLE 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGSIPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGQLVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ RGS+ IDDEG P Q LI NGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTIDGLRGSLAIDDEGVPGQYNVLIGNGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G+ P+EII SV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLAGQSTPQEIIESVEYGLYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK+D +TVGG
Sbjct: 420 KPVKGATLIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLDKLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|359447265|ref|ZP_09236868.1| TldD protein [Pseudoalteromonas sp. BSi20439]
gi|358038904|dbj|GAA73117.1| TldD protein [Pseudoalteromonas sp. BSi20439]
Length = 479
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 261/480 (54%), Positives = 353/480 (73%), Gaps = 7/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N LL L+ + L K L + ++KVDYAD YFQ + +E+W+LE+G+VK G++++
Sbjct: 1 MNSVEQHLLHDSQLNREELEKTLAYIHQHKVDYADLYFQSSHHESWVLEDGLVKEGSYNV 60
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+GVGVRA+SG+KT F YSD I+ L A + RSIA+ G+ K +K + +
Sbjct: 61 ERGVGVRAVSGEKTGFSYSDAINLEALNKAATAARSIADA--GEDKAVKVFSDVAAKQQF 118
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ ISS++ +K+ LL +E R P +VI+++S Y+ +LI +DG DIR
Sbjct: 119 APHQPISSMSDTDKVNLLRELENYIRELAPDAEQVISSMSAVYEEVLIAASDGTFATDIR 178
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEK-----CVSNSVNSALINLEA 496
PL++L ++++EKNGRRE G +G G R +Y YF +++ K +V A +NLEA
Sbjct: 179 PLIRLNCSVLLEKNGRRERGGAGGGARLDYGYFKELVDGKPRWMGFAEEAVRQAKVNLEA 238
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M+VVLG GWPG+LLHEA+GHGLEGDFNRKG+SAFS +G+++AS+ T+VD+G
Sbjct: 239 IDAPAGTMEVVLGNGWPGVLLHEAVGHGLEGDFNRKGASAFSGKVGQKVASELCTVVDDG 298
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+A+RRGS+N+DDEG P LIENGILKGYMQD MNARLM ++ TGNARRES+AH+P+
Sbjct: 299 TMADRRGSLNVDDEGTPAAYNVLIENGILKGYMQDKMNARLMGVNSTGNARRESYAHLPM 358
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ +IIS+VK G++A NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 359 PRMTNTYMLGGEHSQADIISTVKKGIFAPNFGGGQVDITSGKFVFSASEAYLIENGKITQ 418
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG+GP +++++SM+GND+ LD GVGVCGKDGQ VPVGVGQP+LKID +TVGGT
Sbjct: 419 PIKGATLIGNGPEVMQQISMVGNDLALDKGVGVCGKDGQSVPVGVGQPSLKIDQLTVGGT 478
>gi|383191891|ref|YP_005202019.1| putative Zn-dependent protease-like protein [Rahnella aquatilis CIP
78.65 = ATCC 33071]
gi|371590149|gb|AEX53879.1| putative Zn-dependent protease-like protein [Rahnella aquatilis CIP
78.65 = ATCC 33071]
Length = 481
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 270/481 (56%), Positives = 356/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L + LL +L + L ILG + + ++DYAD +FQ + +E W++E+ I+K G+++I
Sbjct: 3 LALVSEQLLTANNLSHQDLFSILGQLSERRLDYADLFFQSSFHEAWVIEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D I+ N L + + RSI Q NGK + +I SL
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQITLNALNLSATAARSIVREQGNGKAH---TLGEIAYKSL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
YS D + S+ KI+LL RV+KIAR D RV +V A+++G Y+ IL+ DG + ADI
Sbjct: 120 YSPLDPLQSLPREAKIELLHRVDKIARAADKRVQEVSASITGVYENILVAATDGTLAADI 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLE 495
RPLV+L V+++VE++GRRE G+SG GGR Y+YF + + E ++V AL+NL
Sbjct: 180 RPLVRLSVSVLVEQDGRRERGSSGGGGRVGYDYFLETVNGEVRAEAFARDAVRMALLNLT 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +GK++AS+ T+VD+
Sbjct: 240 AVAAPAGGMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGKQVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ N RGS+ IDDEG P Q LIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTIPNLRGSLAIDDEGVPGQYNMLIENGVLKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK PEEIISSV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+ G+IT
Sbjct: 360 MPRMTNTYMLGGKSTPEEIISSVEFGLYAPNFGGGQVDITSGKFVFSTSEAYLIEKGRIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KPVKGATLIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|167466825|ref|ZP_02331529.1| TldD protein [Yersinia pestis FV-1]
Length = 481
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 261/481 (54%), Positives = 351/481 (72%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L+ LL L+ + L +LG + + ++DYAD YFQ + +E W+LE+ I+K G+++I
Sbjct: 3 LSFVSEQLLTANKLNHQDLFSVLGQLTERRLDYADLYFQSSYHEAWVLEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D I+ N L + + RSI + NGK+ + +I +L
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQITLNALQQSAHAARSIVRDTGNGKVH---TLGEIAYQAL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y D + S++ +KI LL RV+K+AR D RV +V A+L+G Y+ IL+ DG + AD+
Sbjct: 120 YPLLDPLQSLSREDKIALLHRVDKVARAADKRVQEVSASLTGVYEQILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLE 495
RPLV+L V+++VE NG+RE G G GGR+ Y+YF + + + + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEDNGKRERGACGGGGRFGYDYFLETVDGEVRADNFANEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG WPG+LLHEA+GHGLEGDFNR+GSS FS +GK +AS+ T VD+
Sbjct: 240 AIAAPAGAMPVVLGARWPGVLLHEAVGHGLEGDFNRQGSSVFSGQMGKLVASELCTEVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTMQGRRGSLAIDDEGVPDQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G+ PE+II+SV+ GLYA NF GG +DIT+GKFVFS S+AY+I+ GKIT
Sbjct: 360 MPRMTNTYMLAGQSTPEDIIASVEYGLYAPNFGGGHLDITSGKFVFSTSEAYLIEKGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
+ VKGATLIG G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 HAVKGATLIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|392980926|ref|YP_006479514.1| protease TldD [Enterobacter cloacae subsp. dissolvens SDM]
gi|392326859|gb|AFM61812.1| protease TldD [Enterobacter cloacae subsp. dissolvens SDM]
Length = 481
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 256/481 (53%), Positives = 356/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEHLLAANGLSHQDLFSILGQLTERRLDYGDLYFQSSYHESWVLEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSL 380
+QGVGVRAISG+KT F Y+D IS L + ++ R+I + +G++K + ++ ++L
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLAALEQSAQAARTIVRDAGDGRVKTLGEVQH---SAL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTSIDPLQSMSREEKLDILRRVDKVARAADNRVQEVSASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLE 495
RPLV+L +++ V+ NG+RE G+SG GGR+ Y++F + + +V AL+NL
Sbjct: 180 RPLVRLSISVQVDDNGKRERGSSGGGGRFGYDWFLGDVDGEARADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ ++S+ T+VD+
Sbjct: 240 AVAAPAGSFPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGQLVSSELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGSI+IDDEG P Q LIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTMPDRRGSISIDDEGTPGQYNVLIENGVLKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV G++A NF GGQVDIT+GKFVFS S+AY+I+ GK+T
Sbjct: 360 MPRMTNTYMLPGKSTPQEIIESVDYGIFAPNFGGGQVDITSGKFVFSTSEAYLIEKGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
VKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KAVKGATLIGSGIEAMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|392536493|ref|ZP_10283630.1| suppressor of CsrA inhibitory activity; peptidase; involved in the
control of DNA gyrase [Pseudoalteromonas marina mano4]
Length = 479
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 262/480 (54%), Positives = 353/480 (73%), Gaps = 7/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N LL L+ + L K L + ++KVDYAD YFQ + +E+W+LE+G+VK G++++
Sbjct: 1 MNSVEQHLLHDSQLNREELEKTLAYIHQHKVDYADLYFQSSHHESWVLEDGLVKEGSYNV 60
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+GVGVRA+SG+KT F YSD I+ L A + RSIA+ G+ K IK + +
Sbjct: 61 ERGVGVRAVSGEKTGFSYSDAINLEALNKAATAARSIADA--GEDKAIKVFSDVSAKVQF 118
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ ISS++ +K+ LL +E R P +VI+++S Y+ +LI +DG DIR
Sbjct: 119 APHQPISSMSDSDKVSLLRELENYIRELAPDAEQVISSMSAVYEEVLIAASDGTFATDIR 178
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEK-----CVSNSVNSALINLEA 496
PL++L ++++EKNGRRE G +G G R +Y YF +++ K +V A +NLEA
Sbjct: 179 PLIRLNCSVLLEKNGRRERGGAGGGARLDYGYFKELVNGKPRWMEFAQEAVRQAKVNLEA 238
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M+VVLG GWPG+LLHEA+GHGLEGDFNRKG+SAFS +G+++AS+ T+VD+G
Sbjct: 239 IDAPAGTMEVVLGNGWPGVLLHEAVGHGLEGDFNRKGASAFSGKVGQKVASELCTVVDDG 298
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+A+RRGS+N+DDEG P LIENGILKGYMQD +NARLM ++ TGNARRES+AH+P+
Sbjct: 299 TMADRRGSLNVDDEGTPAAYNVLIENGILKGYMQDKLNARLMGVNPTGNARRESYAHLPM 358
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ +IISSVK G++A NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 359 PRMTNTYMLGGEHSQADIISSVKKGVFAPNFGGGQVDITSGKFVFSASEAYLIENGKITQ 418
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG+GP +++++SM+GND+ LD GVGVCGKDGQ VPVGVGQP+LKID +TVGGT
Sbjct: 419 PIKGATLIGNGPEVMQQISMVGNDLALDKGVGVCGKDGQSVPVGVGQPSLKIDQLTVGGT 478
>gi|315125441|ref|YP_004067444.1| suppressor of CsrA inhibitory activity; peptidase; involved in the
control of DNA gyrase [Pseudoalteromonas sp. SM9913]
gi|315013954|gb|ADT67292.1| suppressor of CsrA inhibitory activity; peptidase; involved in the
control of DNA gyrase [Pseudoalteromonas sp. SM9913]
Length = 479
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 261/480 (54%), Positives = 354/480 (73%), Gaps = 7/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N LL L+ + L K L + ++KVDYAD YFQ + +E+W+LE+G+VK G++++
Sbjct: 1 MNSVEQHLLHDSQLNREELEKTLAYIHQHKVDYADLYFQSSHHESWVLEDGLVKEGSYNV 60
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+GVGVRA+SG+KT F YSD I+ L A + RSIA+ G+ K +K + +
Sbjct: 61 ERGVGVRAVSGEKTGFSYSDAINLEALNKAATAARSIADA--GEDKAVKVFSDVAAKQQF 118
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ ISS++ +K+ LL +E R P +VI+++S Y+ +LI +DG DIR
Sbjct: 119 APHQPISSMSDTDKVNLLRELENYIRELAPDAEQVISSMSAVYEEVLIAASDGTFATDIR 178
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEK-----CVSNSVNSALINLEA 496
PL++L ++++EKNGRRE G +G G R +Y YF +++ K +V A +NLEA
Sbjct: 179 PLIRLNCSVLLEKNGRRERGGAGGGARLDYGYFKELVDGKPRWMGFAEEAVRQAKVNLEA 238
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M+VVLG GWPG+LLHEA+GHGLEGDFNRKG+SAFS +G+++AS+ T+VD+G
Sbjct: 239 IDAPAGTMEVVLGNGWPGVLLHEAVGHGLEGDFNRKGASAFSGKVGQKVASELCTVVDDG 298
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+A+RRGS+N+DDEG P LIENGILKGYMQD MNARLM ++ TGNARRES+AH+P+
Sbjct: 299 TMADRRGSLNVDDEGTPAAYNVLIENGILKGYMQDKMNARLMGVNPTGNARRESYAHLPM 358
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ +IIS+VK G++A NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 359 PRMTNTYMLGGEHSQADIISTVKKGVFAPNFGGGQVDITSGKFVFSASEAYLIENGKITQ 418
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG+GP +++++SM+GND+ LD GVGVCGKDGQ VPVGVGQP+LKID++TVGGT
Sbjct: 419 PIKGATLIGNGPEVMQQISMVGNDLALDKGVGVCGKDGQSVPVGVGQPSLKIDNLTVGGT 478
>gi|395232797|ref|ZP_10411046.1| protease TldD [Enterobacter sp. Ag1]
gi|394732878|gb|EJF32524.1| protease TldD [Enterobacter sp. Ag1]
Length = 481
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 257/481 (53%), Positives = 354/481 (73%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLSANGLTHQDLFSILGQLSERRLDYGDLYFQSSYHESWVLEDRIIKDGSWNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D I+ L + + RSI Q +G+ + + N+ ++L
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQITLQALEQSAHAARSIVREQGDGRARTLGNVPH---SAL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S+ EK+ +L RV+ +AR D RV +V A+L+G Y++IL+ DG + AD+
Sbjct: 120 YTGADPLLSMTREEKLDILRRVDSVARAADARVQEVSASLTGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLE 495
RPLV+L V++ VE++G+RE G SG GGR+ Y YF + + + +V A++NL
Sbjct: 180 RPLVRLSVSVQVEEDGKRERGASGGGGRFGYEYFLESVNGEVRADAWAKEAVRMAMVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG++ VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+
Sbjct: 240 AVAAPAGMLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGQLVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ANRRGS++IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTMANRRGSVSIDDEGVPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV G++A NF GGQVDIT+GKFVFS S+AY+I+ GK+T
Sbjct: 360 MPRMTNTYMLAGKSTPQEIIESVDYGIFAPNFGGGQVDITSGKFVFSTSEAYLIEKGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
VKGATLIG G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 RAVKGATLIGSGIETMQQISMVGNDLALDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|269140471|ref|YP_003297172.1| peptidase U62 modulator of DNA gyrase [Edwardsiella tarda EIB202]
gi|387868950|ref|YP_005700419.1| protein TldD [Edwardsiella tarda FL6-60]
gi|267986132|gb|ACY85961.1| peptidase U62 modulator of DNA gyrase [Edwardsiella tarda EIB202]
gi|304560263|gb|ADM42927.1| TldD [Edwardsiella tarda FL6-60]
Length = 481
Score = 523 bits (1348), Expect = e-145, Method: Compositional matrix adjust.
Identities = 256/474 (54%), Positives = 351/474 (74%), Gaps = 9/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL +L+ + L +LG + ++DYAD YFQ + +E+W+LE+ I+K G++ I+QGVGVR
Sbjct: 10 LLAANNLNHQDLYNVLGQLNARRLDYADLYFQSSVHESWVLEDRIIKEGSYHIDQGVGVR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSLYSFTDTI 387
AI G+KT F Y+D I+ L + + RSI Q +G+ + +K + S Y +
Sbjct: 70 AIHGEKTGFAYADQITLQALTQSAHAARSIVREQGDGRAHTLGGLKAV---SRYGMHSPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S+ EKI LL +V+++AR D RV +V A+L+G Y+++L+ +DG + AD+RPLV+L
Sbjct: 127 DSLPREEKIALLAQVDRVARAADARVQEVNASLTGVYELVLVAASDGTLAADVRPLVRLS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEAKPAPAG 502
V+++VE++GRRE G+ G GGR+ Y+YF ++ + +V AL+NL AK APAG
Sbjct: 187 VSVLVEQDGRRERGSCGGGGRFGYDYFLTLHDGEVCADAYAREAVRMALVNLHAKAAPAG 246
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+++AS T+VD+GTL RR
Sbjct: 247 TMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQLGQQVASPLCTVVDDGTLEERR 306
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+ +DDEG P Q LIENG+L+GYMQD +NARLM M+ TGN RRES+AH+P+PRMTNT
Sbjct: 307 GSLAVDDEGVPGQYNVLIENGVLRGYMQDKLNARLMGMAPTGNGRRESYAHLPMPRMTNT 366
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML G+ P+ II SV+ GLYA NF+GGQVDIT+GKFVFS S+AY+I+ G+IT+PVKGAT
Sbjct: 367 YMLAGESTPQAIIESVEYGLYAPNFAGGQVDITSGKFVFSTSEAYLIEKGRITHPVKGAT 426
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
LIG G ++++SM+GND+ LD GVGVCGK+GQ VPVGVGQPTLK+D++TVGGT
Sbjct: 427 LIGSGMEAMQQISMVGNDLALDKGVGVCGKEGQSVPVGVGQPTLKLDAMTVGGT 480
>gi|444380344|ref|ZP_21179483.1| TldD protein [Enterovibrio sp. AK16]
gi|443675613|gb|ELT82336.1| TldD protein [Enterovibrio sp. AK16]
Length = 481
Score = 523 bits (1348), Expect = e-145, Method: Compositional matrix adjust.
Identities = 259/463 (55%), Positives = 338/463 (73%), Gaps = 7/463 (1%)
Query: 280 LLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFY 339
L + L ++ +DY D YFQ +E+ +LE+ I+K G+F+I++GVGVRAI+G+KT F Y
Sbjct: 21 LSQTLEHLAARNIDYGDVYFQSCWHESLVLEDSIIKDGSFNIDRGVGVRAITGEKTGFAY 80
Query: 340 SDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLL 399
SD I+ + L+ + + R IA++ GK+K+ + + +Y D + S++ EKI LL
Sbjct: 81 SDQINADALMQSATAARGIADK-GGKLKVSAFASR-QYPMIYQAIDPLKSMSKEEKIALL 138
Query: 400 ERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRRE 459
+ V+ R K+P V +V ++ G Y+ +LI DG ADIRPLV+ V+++VEK+GRRE
Sbjct: 139 KEVDAYVRAKEPLVQEVSVSIVGVYEQVLIAATDGTYAADIRPLVRFSVSVLVEKDGRRE 198
Query: 460 IGNSGCGGRYNYNYFTDMILEKCVS-----NSVNSALINLEAKPAPAGIMKVVLGPGWPG 514
G++G GGR+ Y YFT K V+ +V AL+NL AK APAG M VVLG GWPG
Sbjct: 199 RGSAGGGGRFAYTYFTSEEDGKTVAMNYADEAVRQALVNLHAKGAPAGTMPVVLGAGWPG 258
Query: 515 ILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPT 574
+LLHEA+GHGLEGDFNRK SS F+ I +++ S TIVD+GTL +RRGS+NIDDEG P
Sbjct: 259 VLLHEAVGHGLEGDFNRKESSVFTGQIDEQVTSPLCTIVDDGTLQDRRGSLNIDDEGVPG 318
Query: 575 QCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEI 634
Q LIENGILKGYMQD NA LM ++ TGN RRES+AH+P+PRMTNTYML G+ PE+I
Sbjct: 319 QYNVLIENGILKGYMQDKHNAHLMGVAPTGNGRRESYAHLPMPRMTNTYMLAGESTPEDI 378
Query: 635 ISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKV 694
ISSV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+NGK+T PVKGATLIG G +++V
Sbjct: 379 ISSVEYGLYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTTPVKGATLIGSGIEAMQQV 438
Query: 695 SMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
SM+GND+KLD GVGVCGK GQ V VGVGQPTLK+D++TVGGT
Sbjct: 439 SMVGNDLKLDRGVGVCGKAGQSVAVGVGQPTLKLDAMTVGGTE 481
>gi|319896908|ref|YP_004135103.1| peptidase [Haemophilus influenzae F3031]
gi|317432412|emb|CBY80767.1| predicted peptidase [Haemophilus influenzae F3031]
Length = 482
Score = 523 bits (1348), Expect = e-145, Method: Compositional matrix adjust.
Identities = 252/481 (52%), Positives = 345/481 (71%), Gaps = 5/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN + LL P +L + LL I M +DYAD YFQ +++E+W+LE+GI+K G F I
Sbjct: 2 LNQVSNTLLTPSNLSTQTLLNIFDIMSHRNIDYADLYFQLSQDESWVLEDGIIKEGGFHI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVGVRA+SG+KT F Y+D I+ +L ++ + IA G + + + Y
Sbjct: 62 DRGVGVRAVSGEKTGFAYADQINLASLQQCAEAVKGIAQVKQGNLISPSAFNVVNPIARY 121
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + S+ +KI+LL V++ AR +D RV KV A+LS Y+ +LI DG + ADIR
Sbjct: 122 AAINPLESLTKEKKIELLHLVDRTARAEDHRVTKVSASLSSVYEEVLIMATDGTLAADIR 181
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKC-----VSNSVNSALINLEA 496
PLV+L ++++V +NG+RE G+ G GGR+ ++F +++ +V AL+NL A
Sbjct: 182 PLVRLSISVLVGENGKRERGSCGSGGRFGLDWFFEVVDGDIRAVLFAKEAVRQALVNLSA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS F+ IG+++ S TIVD+G
Sbjct: 242 VAAPAGLMPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSLFTGKIGEQVTSPLCTIVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS+ IDDEG P+QC LI++GIL+GYMQD MNARLM ++ TGN RRES+AH+P+
Sbjct: 302 TIENRRGSLTIDDEGVPSQCNVLIKDGILQGYMQDKMNARLMGVAPTGNGRRESYAHLPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ +++I+SV+ G+YA +F GGQVDIT+GKFVFS S+AY+I+ GKIT
Sbjct: 362 PRMTNTYMLAGQSQFDDLIASVEQGIYAPHFGGGQVDITSGKFVFSTSEAYLIEKGKITK 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G +++K+SM+ + +LD G+GVCGK+GQ VPVGVGQP LKID ITVGGT
Sbjct: 422 PVKGATLIGSGIEVMQKISMVADKSELDLGIGVCGKEGQSVPVGVGQPALKIDEITVGGT 481
Query: 737 N 737
N
Sbjct: 482 N 482
>gi|325578581|ref|ZP_08148681.1| U62 family peptidase 2 TldD [Haemophilus parainfluenzae ATCC 33392]
gi|325159817|gb|EGC71947.1| U62 family peptidase 2 TldD [Haemophilus parainfluenzae ATCC 33392]
Length = 482
Score = 523 bits (1348), Expect = e-145, Method: Compositional matrix adjust.
Identities = 252/474 (53%), Positives = 339/474 (71%), Gaps = 5/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P +L + LL I M +DYAD YFQ +++E+W+LE+ I+K G F I++GVGVR
Sbjct: 9 LLVPSNLSHQSLLNIFDVMSHRHIDYADLYFQLSQDESWVLEDSIIKEGGFHIDRGVGVR 68
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+SG+KT F YSD I+ +L ++ + IA G + + + Y+ + +
Sbjct: 69 AVSGEKTGFAYSDQINLASLQQCAEAVKGIAQIKEGNLISPQAFNAVNAVQRYAAINPLE 128
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
S++ +KI+LL V++ AR +DPRV +V A LS Y+ +L+ DG + ADIRPLV+L +
Sbjct: 129 SLSKEKKIELLHLVDRTARAEDPRVTRVSAALSSIYEEVLVVATDGTLAADIRPLVRLSI 188
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEAKPAPAGI 503
+++VE++G+RE G+ G GGR+ ++F D+ +V AL+NL A APAG+
Sbjct: 189 SVLVEEDGKRERGSCGSGGRFGLDWFFEVVNGDIRAVNFAKEAVRQALVNLSAVAAPAGL 248
Query: 504 MKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRG 563
M VVLG GWPG+LLHEA+GHGLEGDFNRK SS F+ IG+ + S TIVD+GTL NRRG
Sbjct: 249 MPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSLFTGKIGELVTSPLCTIVDDGTLQNRRG 308
Query: 564 SINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTY 623
S+ IDDEG P+QC LI++GIL+GYMQD +NARLM + TGN RRES+AH+P+PRMTNTY
Sbjct: 309 SLTIDDEGVPSQCNVLIKDGILQGYMQDKLNARLMGVKPTGNGRRESYAHLPMPRMTNTY 368
Query: 624 MLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATL 683
ML G+ +++I+SV G+YA +F GGQVDIT+GKFVFS S+AY+I+ GKIT PVKGATL
Sbjct: 369 MLAGQSKFDDLIASVDRGIYAPHFGGGQVDITSGKFVFSTSEAYLIEKGKITKPVKGATL 428
Query: 684 IGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
IG G ++++KVSM+ + LD G+GVCGKDGQ VPVGVGQP LKID ITVGGTN
Sbjct: 429 IGSGIDVMQKVSMVADKTDLDLGIGVCGKDGQSVPVGVGQPALKIDEITVGGTN 482
>gi|295097733|emb|CBK86823.1| microcin-processing peptidase 2. Unknown type peptidase. MEROPS
family U62 [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 481
Score = 523 bits (1348), Expect = e-145, Method: Compositional matrix adjust.
Identities = 252/481 (52%), Positives = 356/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEHLLAANGLSHQDLFSILGQLTERRLDYGDLYFQSSYHESWVLEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D IS L + ++ R+I + +G++K + ++ +L
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQISLAALEQSAQAARTIVRDTGDGRVKTLGEVQHA---AL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+L+G Y++IL+ DG + AD+
Sbjct: 120 YTSIDPLQSMSREEKLDILRRVDKVARAADKRVQEVSASLTGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLE 495
RPLV+L +++ VE +G+RE G+SG GGR+ Y++F + + +V AL+NL
Sbjct: 180 RPLVRLSISVQVEDDGKRERGSSGGGGRFGYDWFLGDVDGEARADAWAKEAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ ++S+ T+VD+
Sbjct: 240 AVAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGQLVSSELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGSI++DDEG P Q LIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTMLDRRGSISVDDEGTPGQYNVLIENGVLKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G+ P+EII SV G++A NF GGQVDIT+GKFVFS S+AY+I+ GK+T
Sbjct: 360 MPRMTNTYMLPGQSTPQEIIESVDYGIFAPNFGGGQVDITSGKFVFSTSEAYLIEKGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
VKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KAVKGATLIGSGIEAMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|410090492|ref|ZP_11287086.1| C69 family peptidase [Pseudomonas viridiflava UASWS0038]
gi|409762216|gb|EKN47241.1| C69 family peptidase [Pseudomonas viridiflava UASWS0038]
Length = 479
Score = 523 bits (1348), Expect = e-145, Method: Compositional matrix adjust.
Identities = 267/471 (56%), Positives = 349/471 (74%), Gaps = 5/471 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L L +LG + +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 11 LLAPGGLSLDSLQSVLGELAGPGIDAADLYFQGMISESWALEDGIVKEGSFNLDQGVGVR 70
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
A SG+KT F YS+ I++ L+ A ++ RSI+ NG+++ + + LY+ + +
Sbjct: 71 AQSGEKTGFAYSNAITEEALLTAARAARSISRAGQNGRVQAFTSQD---VAQLYAPDNPL 127
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
+ EK++LL+R++ R DPR+ +V N++G ++ IL+ DG + AD+RPLV+
Sbjct: 128 EVLTRAEKVELLKRIDVATRALDPRIQQVSVNMAGVWERILVAAADGSLAADVRPLVRFN 187
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKV 506
V++IVE+NGRRE G G GGR +Y YF TD ++ AL+NLEA PAPAG + V
Sbjct: 188 VSVIVEQNGRRERGGHGGGGRTDYRYFLTDDRAMGYAREALRQALVNLEAIPAPAGTLPV 247
Query: 507 VLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSIN 566
VLG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G +ASK TIVD+GTLA RRGS++
Sbjct: 248 VLGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGDMVASKLCTIVDDGTLAGRRGSLS 307
Query: 567 IDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLN 626
+DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML
Sbjct: 308 VDDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYMLG 367
Query: 627 GKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGH 686
G+ P+EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+
Sbjct: 368 GQSDPQEIIASVKRGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGN 427
Query: 687 GPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
GP + +VSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 428 GPEAMSRVSMVGNDLSLDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 478
>gi|119470457|ref|ZP_01613185.1| putative suppressor of CsrA inhibitory activity; putative
peptidase; involved in the control of DNA gyrase
[Alteromonadales bacterium TW-7]
gi|119446382|gb|EAW27658.1| putative suppressor of CsrA inhibitory activity; putative
peptidase; involved in the control of DNA gyrase
[Alteromonadales bacterium TW-7]
Length = 479
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 262/480 (54%), Positives = 352/480 (73%), Gaps = 7/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N LL L+ + L K L + ++KVDYAD YFQ + +E+W+LE+G+VK G++++
Sbjct: 1 MNSVEQHLLHDSQLNREELEKTLAYIHQHKVDYADLYFQSSHHESWVLEDGLVKEGSYNV 60
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+GVGVRA+SG+KT F YSD I+ L A + RSIA+ G+ K IK + +
Sbjct: 61 ERGVGVRAVSGEKTGFSYSDAINLEALNKAATAARSIADA--GEDKTIKVFSDVSAKMQF 118
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ ISS++ +K+ LL +E R P +VI+++S Y+ +LI +DG DIR
Sbjct: 119 APHQPISSMSDSDKVSLLRELENYIRELAPDAEQVISSMSAVYEEVLIAASDGTFATDIR 178
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEK-----CVSNSVNSALINLEA 496
PL++L ++++EKNGRRE G +G G R +Y YF +++ K +V A +NLEA
Sbjct: 179 PLIRLNCSVLLEKNGRRERGGAGGGARLDYGYFKELVNGKPRWMEFAQEAVRQAKVNLEA 238
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M+VVLG GWPG+LLHEA+GHGLEGDFNRKG+SAFS +G+++AS+ T+VD+G
Sbjct: 239 IDAPAGTMEVVLGNGWPGVLLHEAVGHGLEGDFNRKGASAFSGKVGQKVASELCTVVDDG 298
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+A+RRGS+N+DDEG P LIENGILKGYMQD +NARLM ++ TGNARRES+AH+P+
Sbjct: 299 TMADRRGSLNVDDEGTPAAYNVLIENGILKGYMQDKLNARLMGVNPTGNARRESYAHLPM 358
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ +IISSVK G++A NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 359 PRMTNTYMLGGEHSQADIISSVKKGVFAPNFGGGQVDITSGKFVFSASEAYLIENGKITQ 418
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG+GP +++ +SM+GND+ LD GVGVCGKDGQ VPVGVGQP+LKID +TVGGT
Sbjct: 419 PIKGATLIGNGPEVMQHISMVGNDLALDKGVGVCGKDGQSVPVGVGQPSLKIDQLTVGGT 478
>gi|392555815|ref|ZP_10302952.1| suppressor of CsrA inhibitory activity; peptidase; involved in the
control of DNA gyrase [Pseudoalteromonas undina NCIMB
2128]
Length = 479
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 261/480 (54%), Positives = 353/480 (73%), Gaps = 7/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N LL L+ + L K L + ++KVDYAD YFQ + +E+W+LE+G+VK G++++
Sbjct: 1 MNSVEQHLLHDSQLNREELEKTLAYIHQHKVDYADLYFQSSHHESWVLEDGLVKEGSYNV 60
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+GVGVRA+SG+KT F YSD I+ L A + RSIA+ G+ K +K + +
Sbjct: 61 ERGVGVRAVSGEKTGFSYSDAINLEALNKAATAARSIADA--GEDKAVKVFSDVAAKQQF 118
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
S ISS++ +K+ LL +E R P +VI+++S Y+ +LI +DG DIR
Sbjct: 119 SPHQPISSMSDTDKVNLLRELENYIRELAPDAEQVISSMSAVYEEVLIAASDGTFATDIR 178
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEK-----CVSNSVNSALINLEA 496
PL++L ++++EK+GRRE G +G G R +Y YF +++ K +V A +NLEA
Sbjct: 179 PLIRLNCSVLLEKSGRRERGGAGGGARLDYGYFKELVDGKPRWMGFAEEAVRQAKVNLEA 238
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M+VVLG GWPG+LLHEA+GHGLEGDFNRKG+SAFS +G+++AS+ T+VD+G
Sbjct: 239 IDAPAGTMEVVLGNGWPGVLLHEAVGHGLEGDFNRKGASAFSGKVGQKVASELCTVVDDG 298
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+A+RRGS+N+DDEG P LIENGILKGYMQD MNARLM ++ TGNARRES+AH+P+
Sbjct: 299 TMADRRGSLNVDDEGTPAAYNVLIENGILKGYMQDKMNARLMGVNPTGNARRESYAHLPM 358
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ +IIS+VK G++A NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 359 PRMTNTYMLGGEHSQADIISTVKKGVFAPNFGGGQVDITSGKFVFSASEAYLIENGKITQ 418
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG+GP +++++SM+GND+ LD GVGVCGKDGQ VPVGVGQP+LKID +TVGGT
Sbjct: 419 PIKGATLIGNGPEVMQQISMVGNDLALDKGVGVCGKDGQSVPVGVGQPSLKIDQLTVGGT 478
>gi|359450823|ref|ZP_09240245.1| TldD protein [Pseudoalteromonas sp. BSi20480]
gi|358043339|dbj|GAA76494.1| TldD protein [Pseudoalteromonas sp. BSi20480]
Length = 479
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 262/480 (54%), Positives = 352/480 (73%), Gaps = 7/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N LL L+ + L K L + ++KVDYAD YFQ + +E+W+LE+G+VK G++++
Sbjct: 1 MNSVEQHLLHDSQLNREELEKTLAYIHQHKVDYADLYFQSSHHESWVLEDGLVKEGSYNV 60
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+GVGVRA+SG+KT F YSD I+ L A + RSIA+ G+ K IK + +
Sbjct: 61 ERGVGVRAVSGEKTGFSYSDAINLEALNKAATAARSIADA--GEDKTIKVFSDVSAKVQF 118
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ ISS++ +K+ LL +E R P +VI+++S Y+ +LI +DG DIR
Sbjct: 119 APHQPISSMSDSDKVSLLRELENYIRELAPDAEQVISSMSAVYEEVLIAASDGTFATDIR 178
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEK-----CVSNSVNSALINLEA 496
PL++L ++++EKNGRRE G +G G R +Y YF +++ K +V A +NLEA
Sbjct: 179 PLIRLNCSVLLEKNGRRERGGAGGGARLDYGYFKELVNGKPRWMEFAQEAVRQAKVNLEA 238
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M+VVLG GWPG+LLHEA+GHGLEGDFNRKG+SAFS +G+++AS+ T+VD+G
Sbjct: 239 IDAPAGTMEVVLGNGWPGVLLHEAVGHGLEGDFNRKGASAFSGKVGQKVASELCTVVDDG 298
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+A+RRGS+N+DDEG P LIENGILKGYMQD +NARLM ++ TGNARRES+AH+P+
Sbjct: 299 TMADRRGSLNVDDEGTPAAYNVLIENGILKGYMQDKLNARLMGVNPTGNARRESYAHLPM 358
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ +IISSVK G++A NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 359 PRMTNTYMLGGEHSQADIISSVKKGVFAPNFGGGQVDITSGKFVFSASEAYLIENGKITQ 418
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG+GP +++ +SM+GND+ LD GVGVCGKDGQ VPVGVGQP+LKID +TVGGT
Sbjct: 419 PIKGATLIGNGPEVMQHISMVGNDLALDKGVGVCGKDGQSVPVGVGQPSLKIDQLTVGGT 478
>gi|319776099|ref|YP_004138587.1| peptidase [Haemophilus influenzae F3047]
gi|317450690|emb|CBY86910.1| predicted peptidase [Haemophilus influenzae F3047]
Length = 482
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 252/481 (52%), Positives = 345/481 (71%), Gaps = 5/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN + LL P +L + LL I M +DYAD YFQ +++E+W+LE+GI+K G F I
Sbjct: 2 LNQVSNTLLTPSNLSTQTLLNIFDIMSHRNIDYADLYFQLSQDESWVLEDGIIKEGGFHI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVGVRA+SG+KT F Y+D I+ +L ++ + IA G + + + Y
Sbjct: 62 DRGVGVRAVSGEKTGFAYADQINLASLQQCAEAVKGIAQVKQGNLISPSAFNVVNPIARY 121
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + S+ +KI+LL V++ AR +D RV KV A+LS Y+ +LI DG + ADIR
Sbjct: 122 AAINPLESLTKEKKIELLHLVDRTARAEDHRVTKVSASLSSVYEEVLIMATDGTLAADIR 181
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKC-----VSNSVNSALINLEA 496
PLV+L ++++VE+N +RE G+ G GGR+ ++F +++ +V AL+NL A
Sbjct: 182 PLVRLSISVLVEENRKRERGSCGSGGRFGLDWFFEVVDGDIRAVLFAKEAVRQALVNLSA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS F+ IG+++ S TIVD+G
Sbjct: 242 VAAPAGLMPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSLFTGKIGEQVTSPLCTIVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS+ IDDEG P+QC LI++GIL+GYMQD MNARLM ++ TGN RRES+AH+P+
Sbjct: 302 TIENRRGSLTIDDEGMPSQCNVLIKDGILQGYMQDKMNARLMGVAPTGNGRRESYAHLPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ +++I+SV+ G+YA +F GGQVDIT+GKFVFS S+AY+I+ GKIT
Sbjct: 362 PRMTNTYMLAGQSQFDDLIASVEQGIYAPHFGGGQVDITSGKFVFSTSEAYLIEKGKITK 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G +++K+SM+ + +LD G+GVCGK+GQ VPVGVGQP LKID ITVGGT
Sbjct: 422 PVKGATLIGCGIEVMQKISMVADKSELDLGIGVCGKEGQSVPVGVGQPALKIDEITVGGT 481
Query: 737 N 737
N
Sbjct: 482 N 482
>gi|359454885|ref|ZP_09244145.1| TldD protein [Pseudoalteromonas sp. BSi20495]
gi|414072438|ref|ZP_11408379.1| TldD protein [Pseudoalteromonas sp. Bsw20308]
gi|358048058|dbj|GAA80394.1| TldD protein [Pseudoalteromonas sp. BSi20495]
gi|410805123|gb|EKS11148.1| TldD protein [Pseudoalteromonas sp. Bsw20308]
Length = 479
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 262/480 (54%), Positives = 354/480 (73%), Gaps = 7/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N LL L+ + L K L + ++KVDYAD YFQ + +E+W+LE+G+VK G++++
Sbjct: 1 MNSVEQHLLHDSLLNREELEKTLAYIHQHKVDYADLYFQSSHHESWVLEDGLVKEGSYNV 60
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+GVGVRA+SG+KT F YSD I+ L A + RSIA+ G+ + IK +K +
Sbjct: 61 ERGVGVRAVSGEKTGFSYSDAINLEALNKAATAARSIADA--GEDRAIKVFSDVKAKEQF 118
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ ISS++ +K+ LL +E R P +VI+++S Y+ +LI +DG DIR
Sbjct: 119 APHQPISSMSDTDKVNLLRELENYIRELAPDAEQVISSMSAVYEEVLIAASDGTFATDIR 178
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEK-----CVSNSVNSALINLEA 496
PL++L ++++EKNGRRE G +G G R +Y YF +++ K +V A +NLEA
Sbjct: 179 PLIRLNCSVLLEKNGRRERGGAGGGARLDYGYFKELVDGKPRWMEFAEEAVRQAKVNLEA 238
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M+VVLG GWPG+LLHEA+GHGLEGDFNRKG+SAFS +G+++AS+ T+VD+G
Sbjct: 239 IDAPAGTMEVVLGNGWPGVLLHEAVGHGLEGDFNRKGASAFSGKVGQKVASELCTVVDDG 298
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+A+RRGS+N+DDEG P LIENGILKGYMQD +NARLM ++ TGNARRES+AH+P+
Sbjct: 299 TMADRRGSLNVDDEGTPAAYNVLIENGILKGYMQDKLNARLMGVNPTGNARRESYAHLPM 358
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ +IISSVK G++A NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 359 PRMTNTYMLGGEHSQADIISSVKKGVFAPNFGGGQVDITSGKFVFSASEAYLIENGKITQ 418
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG+GP +++++SM+GND+ LD GVGVCGKDGQ VPVGVGQP+LKID +TVGGT
Sbjct: 419 PIKGATLIGNGPEVMQQISMVGNDLALDKGVGVCGKDGQSVPVGVGQPSLKIDQLTVGGT 478
>gi|387772955|ref|ZP_10128559.1| TldD/PmbA family protein [Haemophilus parahaemolyticus HK385]
gi|386906048|gb|EIJ70797.1| TldD/PmbA family protein [Haemophilus parahaemolyticus HK385]
Length = 486
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 250/478 (52%), Positives = 349/478 (73%), Gaps = 13/478 (2%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P ++ L ++L + ++DYAD YFQ +++E+W LE+ I+K G F I++G GVR
Sbjct: 9 LLAPSGVELSHLSQVLDHFSSRQIDYADLYFQLSQDESWALEDSIIKEGGFYIDRGFGVR 68
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+SG+KT F Y+D I + L ++ RSI+++S G++ ++KN K+ Y+ + +
Sbjct: 69 AVSGEKTGFAYADQIGLSQLNQCAEAARSISSES-GQL-LVKNFKETTAYQRYAAINPLE 126
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
+++ +K+ LL V+K+AR +DPRV++V AN+S Y+ +L+ DG++ ADIRPLV+L V
Sbjct: 127 TLSREQKVDLLHLVDKVARAEDPRVVQVNANVSAIYEEMLVAATDGMLAADIRPLVRLSV 186
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-------TDMI----LEKCVSNSVNSALINLEAK 497
+++VE+NG+RE G+SG GGRY N+F +M+ E +V AL+NL A
Sbjct: 187 SVLVEENGKRERGSSGMGGRYGLNFFLEPHIINGEMVGYNRAEYLAKEAVRMALVNLGAM 246
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
PAPAG M +VLG GWPGILLHEA+GHGLEGDFNRK SS F+ IG+ + S TIVD+GT
Sbjct: 247 PAPAGTMPIVLGAGWPGILLHEAVGHGLEGDFNRKESSLFTGKIGELVTSPLCTIVDDGT 306
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
+ N RGS+ +DDEG P+Q LIENGILKGY+QD +NARLM ++ TGN RRES+AH+P+P
Sbjct: 307 IQNARGSMTVDDEGVPSQRNVLIENGILKGYLQDKLNARLMGVAPTGNGRRESYAHLPMP 366
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNTY+ G +E+I SV+ G+YA +FSGGQVDIT+GKFVFS ++AY+I+ GKIT P
Sbjct: 367 RMTNTYLTEGNHEFDEMIESVEYGIYAPHFSGGQVDITSGKFVFSTAEAYLIEKGKITKP 426
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
V GATLIG G + +++VSM+G M++DPG+G CGK+GQ VPVGVGQPT+K+D ITVGG
Sbjct: 427 VTGATLIGSGIDAMQQVSMVGKKMEIDPGIGTCGKEGQSVPVGVGQPTVKLDKITVGG 484
>gi|323143673|ref|ZP_08078346.1| TldD/PmbA family protein [Succinatimonas hippei YIT 12066]
gi|322416553|gb|EFY07214.1| TldD/PmbA family protein [Succinatimonas hippei YIT 12066]
Length = 481
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 259/476 (54%), Positives = 344/476 (72%), Gaps = 6/476 (1%)
Query: 265 ARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQG 324
A S+LL+P D+D L K L + K+D+ D YF+ E++ LEEGIVK G++ I++G
Sbjct: 8 ASSVLLDPADIDRNFLDKALSELASRKIDFGDMYFEKNVTESFFLEEGIVKGGSYDISKG 67
Query: 325 VGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIAN-QSNGKIKIIKNIKKIKINSLYSF 383
VGVRA+ G+KT F YSD I K +LI A K+ RSI++ GK+KI+ + LY+
Sbjct: 68 VGVRAVLGEKTGFAYSDVIDKTSLIEACKAARSISSGHECGKVKILT---RKDFTPLYTD 124
Query: 384 TDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPL 443
+ I S+ K+ +LE+++K AR D RVI+V+A+L G Y ++ DG V DI+P
Sbjct: 125 ENPIDSLPREIKVSILEQLDKCARSLDKRVIQVMASLGGLYCHKIVVNTDGTFVCDIKPT 184
Query: 444 VQLFVTIIVE-KNGRREIGNSGCGGRYNYNYFT-DMILEKCVSNSVNSALINLEAKPAPA 501
QL VT+I+ +GR E G + GG Y ++ FT + ++E +V SA +N+EA PAPA
Sbjct: 185 AQLSVTVIMAGSDGRMEQGFASTGGAYLFDRFTKEGVVESLAKEAVRSAAVNMEAIPAPA 244
Query: 502 GIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANR 561
G M VVLG GWPG+L+HEA+GHGLEGDFNR SSAFS+ IG ++AS TI+D+GT+ +R
Sbjct: 245 GTMPVVLGAGWPGVLIHEAVGHGLEGDFNRTKSSAFSDKIGTKVASSACTIIDDGTIKDR 304
Query: 562 RGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTN 621
RGS++ DDEG +Q T LIENGILKGYMQD NA LM + TGN RRES++ +P+PRMTN
Sbjct: 305 RGSLSCDDEGTVSQHTVLIENGILKGYMQDRQNAMLMGVQSTGNGRRESYSCLPLPRMTN 364
Query: 622 TYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGA 681
TYML G + +EIISSVK+G+YA NFSGGQVDIT+GKFVFS S+AY+IKNGKI P+KGA
Sbjct: 365 TYMLPGNYTKDEIISSVKDGIYAVNFSGGQVDITSGKFVFSTSEAYLIKNGKIDVPIKGA 424
Query: 682 TLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
TLIG+GP ++ VSM+GND+K D G+G CGK+GQ V VG+GQPTLK+D++TVGGT
Sbjct: 425 TLIGNGPEVMNLVSMVGNDLKFDAGIGTCGKNGQSVAVGIGQPTLKVDALTVGGTQ 480
>gi|292486777|ref|YP_003529647.1| protease tldD [Erwinia amylovora CFBP1430]
gi|428783706|ref|ZP_19001199.1| Protease tldD [Erwinia amylovora ACW56400]
gi|291552194|emb|CBA19231.1| Protease tldD [Erwinia amylovora CFBP1430]
gi|426277421|gb|EKV55146.1| Protease tldD [Erwinia amylovora ACW56400]
Length = 495
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 262/493 (53%), Positives = 354/493 (71%), Gaps = 10/493 (2%)
Query: 251 CILIS-QKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWIL 309
C LI ++ LN+ LL ++ + L +LG + + K+DYAD YFQ + +E+W+L
Sbjct: 5 CGLIHIKREFMSLNLVSEQLLTANNVSQSDLFSLLGQLSERKLDYADLYFQSSFHESWVL 64
Query: 310 EEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKI 368
E+ I+K G+++I+QGVGVRA+SG+KT F Y+D I+ N L + + RSI Q NG+ +
Sbjct: 65 EDRIIKDGSYNIDQGVGVRAVSGEKTGFAYADQITLNALHQSATAARSIVREQGNGQSRT 124
Query: 369 IKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVIL 428
+ + + Y D + S++ EKI LL RV+ AR D RV +V A+L+G Y+ +L
Sbjct: 125 LAAVVN---RARYPALDPLHSLSREEKIALLHRVDSAARAADKRVQEVSASLTGVYEQVL 181
Query: 429 ITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCV 483
+ DG + AD+RPLV+L +++ VE NG+RE G+SG GGR+ Y +F ++ E
Sbjct: 182 VAATDGTLAADVRPLVRLSISVQVEDNGKRERGSSGGGGRFGYEFFLANEAGEVRAEAWA 241
Query: 484 SNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGK 543
+V AL+NL A APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+
Sbjct: 242 REAVRMALVNLGAVAAPAGSIPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGQ 301
Query: 544 RIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSIT 603
R+AS+ T+VD+GT+ RGS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ T
Sbjct: 302 RVASELCTVVDDGTIDGLRGSLAIDDEGVPGQYNVLIENGILKGYMQDKLNARLMGVAPT 361
Query: 604 GNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSA 663
GN RRES+AH+P+PRMTNTYML G+ P+EII SV+ GLYA NF GGQVDIT+GKFVFS
Sbjct: 362 GNGRRESYAHLPMPRMTNTYMLAGQSTPQEIIESVEYGLYAPNFGGGQVDITSGKFVFST 421
Query: 664 SKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQ 723
S+AY+I+NGK+T PVKGATLI G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQ
Sbjct: 422 SEAYLIENGKVTKPVKGATLISSGIEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQ 481
Query: 724 PTLKIDSITVGGT 736
PTLK+D +TVGGT
Sbjct: 482 PTLKLDKLTVGGT 494
>gi|431928407|ref|YP_007241441.1| microcin-processing peptidase 2 [Pseudomonas stutzeri RCH2]
gi|431826694|gb|AGA87811.1| microcin-processing peptidase 2 [Pseudomonas stutzeri RCH2]
Length = 480
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 271/470 (57%), Positives = 348/470 (74%), Gaps = 3/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L L +LG + VD AD YFQ +E+W+LE+GIVK G F + QGVGVR
Sbjct: 12 LLTPGGLGIDDLPGLLGELAGPGVDAADLYFQDQVSESWVLEDGIVKEGGFHLEQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+SG+KT F YS+ I+ + L A ++ RSIA +G+ +K + K LYS + +
Sbjct: 72 ALSGEKTGFAYSNAITADALRQAAQAARSIAR--SGQQGQVKVLSKAAFAPLYSRDNPLD 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ EK++LL+R++ R DPR+ +V +L+G ++ IL+ DG + DIRPLV+ V
Sbjct: 130 GLSRAEKVELLKRIDVATRALDPRIKQVTVSLAGVWEHILVAGMDGGMATDIRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
++IVE+NGRRE G G GGR Y YF T+ ++ AL+NLEA PAPAG + VV
Sbjct: 190 SVIVEQNGRRERGGQGGGGRTGYQYFLTEDRAMGYAREALRQALVNLEAVPAPAGSLPVV 249
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LGPGW G+LLHEA+GHGLEGDFNRKGSSA+S IG+++AS TIVD+GTLA+RRGS+++
Sbjct: 250 LGPGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRIGEQVASSLCTIVDDGTLADRRGSLSV 309
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PTQCTTLIENGILKGY+QD +NARLM ++ TGN RRES+AH+P+PRMTNTYML G
Sbjct: 310 DDEGTPTQCTTLIENGILKGYIQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNTYMLAG 369
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ P+EII SVK G+Y + GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+G
Sbjct: 370 ESDPQEIIRSVKKGIYCASLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGNG 429
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
P ++ +VSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID ITVGGT
Sbjct: 430 PEVMNRVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKIDEITVGGTG 479
>gi|261493015|ref|ZP_05989557.1| U62 family microcin-processing peptidase 2 [Mannheimia haemolytica
serotype A2 str. BOVINE]
gi|261495165|ref|ZP_05991628.1| U62 family microcin-processing peptidase 2 [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261309141|gb|EEY10381.1| U62 family microcin-processing peptidase 2 [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261311359|gb|EEY12520.1| U62 family microcin-processing peptidase 2 [Mannheimia haemolytica
serotype A2 str. BOVINE]
Length = 459
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 254/459 (55%), Positives = 333/459 (72%), Gaps = 8/459 (1%)
Query: 283 ILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDD 342
+L + +DYAD YFQ +++E+W LE+ I+K G F I++G GVRAISG+KT F Y+D
Sbjct: 1 MLDHFSGRHIDYADLYFQLSQDESWSLEDSIIKEGGFYIDRGFGVRAISGEKTGFAYADQ 60
Query: 343 ISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERV 402
I+ L + RSI+ S G++ + KN KK S Y + + +I+ +K++LL V
Sbjct: 61 ITLKQLEQCAAAARSISPTS-GQLSV-KNFKKTTACSRYPAINPLETISREQKVELLHLV 118
Query: 403 EKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGN 462
+K AR+ DPRVI+V ANLS Y+ +L+ DG + ADIRPLV+L V+++VE+NG+RE G+
Sbjct: 119 DKTARMADPRVIQVNANLSAVYEEMLVAATDGTLAADIRPLVRLSVSVLVEQNGKRERGS 178
Query: 463 SGCGGRYNYNYFTD------MILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGIL 516
+G GGR+ ++F E +V AL+NL A PAPAG M +VLG GWPGIL
Sbjct: 179 AGAGGRFGLDWFLAPSETGFSRAESLTKEAVRQALVNLTAIPAPAGTMPIVLGAGWPGIL 238
Query: 517 LHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQC 576
LHEA+GHGLEGDFNRK SS FS IG+ + S+ TIVD+GT+ N RGSI +DDEG P+Q
Sbjct: 239 LHEAVGHGLEGDFNRKESSLFSGKIGQMVTSELCTIVDDGTVPNMRGSITVDDEGVPSQR 298
Query: 577 TTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIIS 636
LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTY+ G EE+I
Sbjct: 299 NALIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNTYLTEGNHEFEEMIE 358
Query: 637 SVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSM 696
SV+ GLYA +FSGGQVDIT+GKFVFS ++AY+I+ GKIT PV GATLIG G +++VSM
Sbjct: 359 SVEYGLYAPHFSGGQVDITSGKFVFSTAEAYLIEKGKITKPVTGATLIGSGIEAMQQVSM 418
Query: 697 IGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
+G M+LDPG+G CGK+GQ VPVGVGQPT+K+D ITVGG
Sbjct: 419 VGKKMELDPGIGTCGKEGQSVPVGVGQPTVKLDKITVGG 457
>gi|229588414|ref|YP_002870533.1| putative modulation of DNA gyrase-like protein [Pseudomonas
fluorescens SBW25]
gi|229360280|emb|CAY47137.1| putative modulation of DNA gyrase-related protein [Pseudomonas
fluorescens SBW25]
Length = 480
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 266/470 (56%), Positives = 348/470 (74%), Gaps = 3/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P + + L +LG++ +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGVTIESLQTVLGDLAGPGIDAADLYFQGQISESWALEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ L A ++ RSI+ G+ ++ + LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAITLEALGLAARAARSISRA--GQNGTVQAFSTQDVAQLYAPDNPLE 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
I+ EK++LL+R++ R DPR+ +V +++G ++ IL+ DG + AD+RPLV+ V
Sbjct: 130 VISRAEKVELLKRIDAATRALDPRIQQVTVSMAGVWERILVASTDGGLAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
++IVE+NGRRE G G GGR +Y YF TD ++ AL+NLEA PAPAG + VV
Sbjct: 190 SVIVEQNGRRERGGHGGGGRTDYRYFLTDDRAMGYAREALRQALVNLEAIPAPAGTLPVV 249
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+GTLA RRGS+++
Sbjct: 250 LGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGTLAGRRGSLSV 309
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML G
Sbjct: 310 DDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYMLGG 369
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ P EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+G
Sbjct: 370 ESDPAEIIASVKRGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGNG 429
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
P + KVSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 430 PEAMSKVSMVGNDLSLDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|354725445|ref|ZP_09039660.1| protease TldD [Enterobacter mori LMG 25706]
Length = 481
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 253/481 (52%), Positives = 355/481 (73%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEHLLAANGLSHQDLFSILGQLTERRLDYGDLYFQSSYHESWVLEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D IS L + ++ R+I + +G++K + ++ +L
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQISLAALEQSAQAARTIVRDTGDGRVKTLGEVQHA---AL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTSIDPLQSMSREEKLDILRRVDKVARAADKRVQEVSASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLE 495
RPLV+L +++ VE +G+RE G+SG GGR+ Y++F + + +V A++NL
Sbjct: 180 RPLVRLSISVQVEDDGKRERGSSGGGGRFGYDWFLGDVGGEARADAWAKEAVRMAMVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ ++S+ T+VD+
Sbjct: 240 AVAAPAGSFPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGQLVSSELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGSI+IDDEG P Q LIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTMLDRRGSISIDDEGTPGQYNVLIENGVLKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G+ P+EII SV G++A NF GGQVDIT+GKFVFS S+AY+I+ GK+T
Sbjct: 360 MPRMTNTYMLPGQSTPQEIIESVDYGIFAPNFGGGQVDITSGKFVFSTSEAYLIEKGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
VKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KAVKGATLIGSGIEAMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|261344915|ref|ZP_05972559.1| TldD protein [Providencia rustigianii DSM 4541]
gi|282567055|gb|EFB72590.1| TldD protein [Providencia rustigianii DSM 4541]
Length = 481
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 266/474 (56%), Positives = 355/474 (74%), Gaps = 9/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL L + L IL + + +VDY D +FQ + +E+W+LE+ I+K G+++I+QGVGVR
Sbjct: 10 LLTANGLKQDNLYDILTLLSERRVDYGDLFFQSSYHESWVLEDRIIKDGSYNIDQGVGVR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSI-ANQSNGKIKIIKNIKKIKINSLYSFTDTI 387
AI+G+KT F Y+D IS L + + RSI Q +GK +I+ N+ K LYS D +
Sbjct: 70 AITGEKTGFAYADQISLLALTQSATAARSIVTEQGSGKSQILTNVDYKK---LYSEADPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S+ +KI+LL RV+++AR +DPRVI+V A+L+G Y+ +L+ DG + +DIRPLV+L
Sbjct: 127 QSLPREQKIELLHRVDQVARAEDPRVIEVNASLTGVYEQVLVAATDGTLASDIRPLVRLS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYFTDM-----ILEKCVSNSVNSALINLEAKPAPAG 502
V+++VE +G+RE G SG GGRY Y YF ++ + E+ +V AL+NL A APAG
Sbjct: 187 VSVLVEHDGKRERGASGGGGRYGYEYFLEIHQGQVVAEQYAREAVRMALVNLSAIAAPAG 246
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
+M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+++AS T+VD+GT+ RR
Sbjct: 247 MMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGKVGEQVASSLCTVVDDGTIVGRR 306
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+ +DDEG P Q LIENGIL+ Y+QD NARLM ++ TGNARRES+AH+P+PRMTNT
Sbjct: 307 GSLAVDDEGVPGQYNILIENGILRNYIQDKHNARLMGVAPTGNARRESYAHLPMPRMTNT 366
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML G+ PEEII+SV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+NGKIT PVKGAT
Sbjct: 367 YMLAGQSTPEEIIASVEKGLYAPNFGGGQVDITSGKFVFSTSEAYLIENGKITSPVKGAT 426
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
LIG G ++++SM+GND+ LD GVGVCGK+GQ VPVGVGQPTLK+D +TVGGT
Sbjct: 427 LIGSGVEAMQQISMVGNDLALDKGVGVCGKEGQSVPVGVGQPTLKLDKMTVGGT 480
>gi|238022010|ref|ZP_04602436.1| hypothetical protein GCWU000324_01915 [Kingella oralis ATCC 51147]
gi|237866624|gb|EEP67666.1| hypothetical protein GCWU000324_01915 [Kingella oralis ATCC 51147]
Length = 430
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 245/430 (56%), Positives = 331/430 (76%), Gaps = 4/430 (0%)
Query: 309 LEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGK-IK 367
++EGIVK+G++ INQGVGVRA+SG+KTAF Y+D +S++ + A ++ R I N ++
Sbjct: 1 MDEGIVKSGSYQINQGVGVRAVSGEKTAFAYADSLSEDAIRRAAQAVRVIGEAGNATPVR 60
Query: 368 IIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVI 427
+ + + Y + I++++ +K+ LL++VE +AR DPR+++V+A L+ E+D++
Sbjct: 61 VPAQVSGCP--NAYGALNPIATLDSPQKVALLQKVETLARAADPRIVQVMAGLTCEHDMV 118
Query: 428 LITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSV 487
I R DG ADIRPLV+L +T+I ++ RRE G++G GGR++ YF D +++ V+++V
Sbjct: 119 YIARLDGKHAADIRPLVRLSLTVIAKQGERREQGSAGGGGRFDLAYFDDAKIQEYVNHAV 178
Query: 488 NSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIAS 547
AL NLE++PAPAG M VVLG GWPGILLHEA+GHGLEGDFNRK +SAFS IG+R+A+
Sbjct: 179 KQALTNLESRPAPAGAMTVVLGSGWPGILLHEAVGHGLEGDFNRKQTSAFSGLIGQRVAA 238
Query: 548 KEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNAR 607
K +T++D G +A RRGS+NIDDEGN TQ T LIE+GIL GYMQD NARLM S TGN R
Sbjct: 239 KGVTVIDQGNIAERRGSLNIDDEGNETQRTVLIEDGILTGYMQDETNARLMGASPTGNGR 298
Query: 608 RESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAY 667
RES++ P+PRMTNT+M NG EEII+S+ G+YA NF GGQVDIT+GKFVFSAS+A+
Sbjct: 299 RESYSSAPMPRMTNTFMENGTHEAEEIIASIDKGIYAVNFGGGQVDITSGKFVFSASEAW 358
Query: 668 IIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLK 727
++NGK+ YPVKGAT+IG+GP +LK VSMIGND LD G+GVCGKDGQ VPVGVGQPTL+
Sbjct: 359 WVENGKLQYPVKGATIIGNGPEVLKHVSMIGNDSSLDTGIGVCGKDGQSVPVGVGQPTLR 418
Query: 728 IDS-ITVGGT 736
ID+ +TVGG+
Sbjct: 419 IDAGLTVGGS 428
>gi|359438648|ref|ZP_09228651.1| TldD protein [Pseudoalteromonas sp. BSi20311]
gi|358026670|dbj|GAA64900.1| TldD protein [Pseudoalteromonas sp. BSi20311]
Length = 479
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 261/480 (54%), Positives = 352/480 (73%), Gaps = 7/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N LL L+ + L K L + ++KVDYAD YFQ + +E+W+LE+G+VK G++++
Sbjct: 1 MNSVEQHLLHDSQLNREELEKTLAYIHQHKVDYADLYFQSSHHESWVLEDGLVKEGSYNV 60
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+GVGVRA+SG+KT F YSD I+ L A + RSIA+ G+ K +K + +
Sbjct: 61 ERGVGVRAVSGEKTGFSYSDAINLEALNKAATAARSIADA--GEDKAVKVFSDVAAKQQF 118
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ ISS++ +K+ LL +E R P +VI+++S Y+ ILI +DG DIR
Sbjct: 119 APHQPISSMSDTDKVNLLRELENYIRELAPDAEQVISSMSAVYEEILIAASDGTFATDIR 178
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEK-----CVSNSVNSALINLEA 496
PL++L ++++E NGRRE G +G G R +Y YF +++ K +V A +NLEA
Sbjct: 179 PLIRLNCSVLLENNGRRERGGAGGGARLDYGYFKELVDGKPRWMAFAEEAVRQAKVNLEA 238
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M+VVLG GWPG+LLHEA+GHGLEGDFNRKG+SAFS +G+++AS+ T+VD+G
Sbjct: 239 IDAPAGTMEVVLGNGWPGVLLHEAVGHGLEGDFNRKGASAFSGKVGQKVASELCTVVDDG 298
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+A+RRGS+N+DDEG P LIENGILKGYMQD MNARLM ++ TGNARRES+AH+P+
Sbjct: 299 TMADRRGSLNVDDEGTPAAYNVLIENGILKGYMQDKMNARLMGVNPTGNARRESYAHLPM 358
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ +IIS+VK G++A NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 359 PRMTNTYMLGGEHSQADIISTVKKGVFAPNFGGGQVDITSGKFVFSASEAYLIENGKITQ 418
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG+GP +++++SM+GND+ LD GVGVCGKDGQ VPVGVGQP+LKID +TVGGT
Sbjct: 419 PIKGATLIGNGPEVMQQISMVGNDLALDKGVGVCGKDGQSVPVGVGQPSLKIDQLTVGGT 478
>gi|190150870|ref|YP_001969395.1| TldD-like protein [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|307264221|ref|ZP_07545812.1| hypothetical protein appser13_16170 [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|189916001|gb|ACE62253.1| TldD-like protein [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|306870467|gb|EFN02220.1| hypothetical protein appser13_16170 [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 486
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 256/485 (52%), Positives = 342/485 (70%), Gaps = 13/485 (2%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN LL P L+ L K+L + ++DYAD YFQ +++E+W LE+ I+K G F I
Sbjct: 2 LNQVSESLLAPSGLELSHLSKVLNHFANRQIDYADLYFQLSQDESWSLEDSIIKEGGFYI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++G GVRA+SG+KT F Y+D I + L + RSI N S G++ + K+ K+ Y
Sbjct: 62 DRGFGVRAVSGEKTGFAYADQIGLSQLEQCATAARSITNAS-GQLSV-KSFKQTNAIKRY 119
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + +++ +K++LL V+K+AR +DPRVI+V A LS Y+ +L+ DG + ADIR
Sbjct: 120 ASVNPLDTLSREQKVELLHLVDKVARAEDPRVIQVNAGLSAVYEEMLVAATDGTLAADIR 179
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----------TDMILEKCVSNSVNSA 490
PLV+L V+++VE+NG+RE G++G GGR+ N+F D +V A
Sbjct: 180 PLVRLSVSVLVEENGKRERGSAGAGGRFGLNWFFEPQVVNGEMTGDTRAVYLAKEAVRMA 239
Query: 491 LINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEI 550
L+NL A PAPAG M +VLG GWPGILLHEA+GHGLEGDFNRK SS F+ IG+ + S
Sbjct: 240 LVNLSAMPAPAGTMPIVLGAGWPGILLHEAVGHGLEGDFNRKESSLFTGKIGELVTSPLC 299
Query: 551 TIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRES 610
TIVD+GT+ N RGSI +DDEG P+Q LIENGILKGYMQD +NARLM ++ TGN RRES
Sbjct: 300 TIVDDGTVPNVRGSITVDDEGVPSQRNVLIENGILKGYMQDKLNARLMGVAPTGNGRRES 359
Query: 611 FAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIK 670
+AH+P+PRMTNTY+ G EE+I SV G+YA +FSGGQVDIT+GKFVFS ++AY+I+
Sbjct: 360 YAHLPMPRMTNTYLTEGSHSFEEMIESVDYGIYALHFSGGQVDITSGKFVFSTAEAYLIE 419
Query: 671 NGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS 730
GKIT PV GATLIG G + +++VSM+G M+LDPG+G CGK+GQ VPVGVGQPT+K+D
Sbjct: 420 KGKITKPVTGATLIGSGIDAMQQVSMVGKKMELDPGIGTCGKEGQSVPVGVGQPTVKLDK 479
Query: 731 ITVGG 735
ITVGG
Sbjct: 480 ITVGG 484
>gi|408483787|ref|ZP_11190006.1| putative modulation of DNA gyrase-like protein [Pseudomonas sp.
R81]
Length = 480
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 266/470 (56%), Positives = 348/470 (74%), Gaps = 3/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P + + L +LG++ +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGVTIESLQTVLGDLAGPGIDAADLYFQGQISESWALEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ L A ++ RSI+ G+ ++ + LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAITLEALGLAARAARSISRA--GQNGTVQAFSTQDVAQLYAPDNPLE 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
I+ EK++LL+R++ R DPR+ +V +++G ++ IL+ DG + AD+RPLV+ V
Sbjct: 130 VISRAEKVELLKRIDAATRALDPRIQQVTVSMAGVWERILVASTDGGLAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
++IVE+NGRRE G G GGR +Y YF TD ++ AL+NLEA PAPAG + VV
Sbjct: 190 SVIVEQNGRRERGGHGGGGRTDYRYFLTDDRAMGYAREALRQALVNLEAIPAPAGTLPVV 249
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+GTLA RRGS+++
Sbjct: 250 LGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGTLAGRRGSLSV 309
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML G
Sbjct: 310 DDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYMLGG 369
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ P EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+G
Sbjct: 370 ESDPAEIIASVKRGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGNG 429
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
P + KVSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 430 PEAMSKVSMVGNDLSLDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|419801336|ref|ZP_14326570.1| TldD protein [Haemophilus parainfluenzae HK262]
gi|419845438|ref|ZP_14368709.1| TldD protein [Haemophilus parainfluenzae HK2019]
gi|385193813|gb|EIF41162.1| TldD protein [Haemophilus parainfluenzae HK262]
gi|386415743|gb|EIJ30267.1| TldD protein [Haemophilus parainfluenzae HK2019]
Length = 482
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 252/474 (53%), Positives = 337/474 (71%), Gaps = 5/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P +L + LL I M +DYAD YFQ +++E+W+LE+ I+K G F I++GVGVR
Sbjct: 9 LLVPSNLSHQSLLNIFDVMSHRHIDYADLYFQLSQDESWVLEDSIIKEGGFHIDRGVGVR 68
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+SG+KT F YSD I+ +L ++ + IA G + + + Y+ + +
Sbjct: 69 AVSGEKTGFAYSDQINLASLQQCAEAVKGIAQIKEGNLISPQAFNAVNAVQRYAAINPLE 128
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
S++ +KI+LL V++ AR +DPRV V A LS Y+ +L+ DG ADIRPLV+L +
Sbjct: 129 SLSKEKKIELLHLVDRTARAEDPRVTHVSAALSSIYEEVLVVATDGTFAADIRPLVRLSI 188
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEAKPAPAGI 503
+++VE++G+RE G+ G GGR+ ++F D+ +V AL+NL A APAG+
Sbjct: 189 SVLVEEDGKRERGSCGSGGRFGLDWFFEVVNGDIRAVNFAKEAVRQALVNLSAVAAPAGL 248
Query: 504 MKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRG 563
M VVLG GWPG+LLHEA+GHGLEGDFNRK SS F+ IG+ + S TIVD+GTL NRRG
Sbjct: 249 MPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSLFTGKIGELVTSPLCTIVDDGTLQNRRG 308
Query: 564 SINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTY 623
S+ IDDEG P+QC LI++GIL+GYMQD +NARLM + TGN RRES+AH+P+PRMTNTY
Sbjct: 309 SLTIDDEGVPSQCNVLIKDGILQGYMQDKLNARLMGVKPTGNGRRESYAHLPMPRMTNTY 368
Query: 624 MLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATL 683
ML G+ +++I+SV G+YA +F GGQVDIT+GKFVFS S+AY+I+ GKIT PVKGATL
Sbjct: 369 MLAGQSKFDDLIASVDRGIYAPHFGGGQVDITSGKFVFSTSEAYLIEKGKITKPVKGATL 428
Query: 684 IGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
IG G ++++KVSM+ + LD G+GVCGKDGQ VPVGVGQP LKID ITVGGTN
Sbjct: 429 IGSGIDVMQKVSMVADKTDLDLGIGVCGKDGQSVPVGVGQPALKIDEITVGGTN 482
>gi|397685871|ref|YP_006523190.1| C69 family peptidase [Pseudomonas stutzeri DSM 10701]
gi|395807427|gb|AFN76832.1| peptidase U62, modulator of DNA gyrase [Pseudomonas stutzeri DSM
10701]
Length = 480
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 269/470 (57%), Positives = 346/470 (73%), Gaps = 3/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L L +LG + +D AD YFQ E+W+LE+GIVK G F + QGVGVR
Sbjct: 12 LLSPGGLAIDDLPGLLGELAGPGIDAADMYFQDQVTESWVLEDGIVKEGGFHLEQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+SG+KT F YS+ I+ + L A ++ RSIA +G+ ++ +KK LY + +
Sbjct: 72 ALSGEKTGFAYSNAITADALRQAAQAARSIAR--SGQQGRVEVLKKAAFAPLYGHDNPLD 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
+ EK++LL+R++ R DPR+ +V +L+G ++ +L+ DG + ADIRPLV+ V
Sbjct: 130 GLGRAEKVELLKRIDVATRALDPRIKQVTVSLAGVWEHVLVAGLDGGMAADIRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
++IVE+NGRRE G G GGR Y YF ++ ++ AL+NLEA PAPAG + VV
Sbjct: 190 SVIVEQNGRRERGGQGGGGRSGYEYFLSEDRAMGYAREALRQALVNLEAVPAPAGTLPVV 249
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LGPGW G+LLHEA+GHGLEGDFNRKGSSA+S IG+++AS TIVD+GTLA RRGS+++
Sbjct: 250 LGPGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRIGQQVASPLCTIVDDGTLAGRRGSLSV 309
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PTQCTTLIENG+LKGY+QD +NARLM ++ TGN RRES+AH+P+PRMTNTYML G
Sbjct: 310 DDEGTPTQCTTLIENGVLKGYIQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNTYMLAG 369
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ P+EII SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+G
Sbjct: 370 ESDPQEIIRSVKKGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGNG 429
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
P ++ KVSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID ITVGGT
Sbjct: 430 PEVMNKVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKIDGITVGGTG 479
>gi|240949981|ref|ZP_04754295.1| TldD-like protein [Actinobacillus minor NM305]
gi|240295551|gb|EER46282.1| TldD-like protein [Actinobacillus minor NM305]
Length = 486
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 255/478 (53%), Positives = 342/478 (71%), Gaps = 13/478 (2%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L+ L ++L + +DYAD YFQ + +E+W LE+ I+K G F I++G GVR
Sbjct: 9 LLAPSGLELSHLSQVLDHFSTRHIDYADLYFQLSMDESWALEDSIIKEGGFYIDKGFGVR 68
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+SG+KT F Y+D IS N L + RSI Q +G+ ++KN K+ Y + +
Sbjct: 69 AVSGEKTGFAYADQISLNQLEQCAVAARSI-TQESGQF-LVKNFKETTACKRYPSINPLD 126
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ +K++LL V+K+AR +DPRVI+V AN+S Y+ +L+ +DG + ADIRPLV+L V
Sbjct: 127 TLTREQKVELLHLVDKVARAEDPRVIQVNANVSAVYEEMLVAASDGTLAADIRPLVRLSV 186
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-------TDMI----LEKCVSNSVNSALINLEAK 497
+++VE+NG+RE G++G GGRY N+F +M+ E +V AL+NL A
Sbjct: 187 SVLVEENGKRERGSAGAGGRYGLNWFFEPKVINGEMVGYNRAEYLAKEAVRMALVNLGAM 246
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
PAPAG M +VLG GWPGILLHEA+GHGLEGDFNRK SS F+ IG+ + S TIVD+GT
Sbjct: 247 PAPAGSMPIVLGAGWPGILLHEAVGHGLEGDFNRKESSLFTGKIGELVTSPLCTIVDDGT 306
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
+ + RGS+ +DDEG P+Q LIENGILKGY+QD +NARLM ++ TGN RRES+AH+P+P
Sbjct: 307 IQDARGSMTVDDEGVPSQRNVLIENGILKGYIQDKLNARLMGVAPTGNGRRESYAHLPMP 366
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNTY+ G EE+I SV+ GLYA +FSGGQVDIT+GKFVFS ++AY+I+ GKIT P
Sbjct: 367 RMTNTYLTEGNHDFEEMIESVEYGLYAPHFSGGQVDITSGKFVFSTAEAYLIEKGKITQP 426
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
V GATLIG G +++VSM+G M+LDPG+G CGK+GQ VPVGVGQPT+K+D ITVGG
Sbjct: 427 VTGATLIGSGIEAMQQVSMVGKKMELDPGIGTCGKEGQSVPVGVGQPTVKLDKITVGG 484
>gi|292900823|ref|YP_003540192.1| modulator of DNA gyrase [Erwinia amylovora ATCC 49946]
gi|291200671|emb|CBJ47803.1| putative modulator of DNA gyrase [Erwinia amylovora ATCC 49946]
Length = 481
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 259/481 (53%), Positives = 349/481 (72%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL ++ + L +LG + + K+DYAD YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLTANNVSQSDLFSLLGQLSERKLDYADLYFQSSFHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D I+ N L + + RSI Q NG+ + + + +
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQITLNALHQSATAARSIVREQGNGQSRTLAAVVN---RAR 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y D + S++ EKI LL RV+ AR D RV +V A+L+G Y+ +L+ DG + AD+
Sbjct: 120 YPALDPLHSLSREEKIALLHRVDSAARAADKRVQEVSASLTGVYEQVLVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L +++ VE NG+RE G+SG GGR+ Y +F ++ E +V AL+NL
Sbjct: 180 RPLVRLSISVQVEDNGKRERGSSGGGGRFGYEFFLANEAGEVRAEAWAREAVRMALVNLG 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+R+AS+ T+VD+
Sbjct: 240 AVAAPAGSIPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGQRVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ RGS+ IDDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTIDGLRGSLAIDDEGVPGQYNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G+ P+EII SV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLAGQSTPQEIIESVEYGLYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLI G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK+D +TVGG
Sbjct: 420 KPVKGATLISSGIEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLDKLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|152987203|ref|YP_001350424.1| hypothetical protein PSPA7_5088 [Pseudomonas aeruginosa PA7]
gi|150962361|gb|ABR84386.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
Length = 480
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 261/472 (55%), Positives = 348/472 (73%), Gaps = 7/472 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L+ L IL + VD AD YFQ +E+W+LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGLELDSLPGILHELSGPGVDAADLYFQSQVSESWMLEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
A SG+KT F YS+ I+ L A ++ RSI+ NG ++ K + + LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAITGEALKQAAQAARSISRAGQNGSVQAFKAVLPAR---LYAGENPL 128
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
++ EK++LL++++ R DPR+ +V +++G ++ IL+ +DG + ADIRPLV+
Sbjct: 129 DVLSRAEKVELLKKIDAATRALDPRIQQVTVSMAGVWEQILVAASDGSLAADIRPLVRFN 188
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF--TDMILEKCVSNSVNSALINLEAKPAPAGIMK 505
V++IVE+NGRRE G G GGR +Y YF D + ++ AL+NLEA PAPAG +
Sbjct: 189 VSVIVEQNGRRERGGHGGGGRTDYRYFLQEDRAM-GYAREALRQALVNLEAIPAPAGTLP 247
Query: 506 VVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSI 565
VV+G GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+++AS TIVD+GTLA RRGS+
Sbjct: 248 VVMGAGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRVGEKVASSLCTIVDDGTLAGRRGSL 307
Query: 566 NIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYML 625
++DDEG P+ C LIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML
Sbjct: 308 SVDDEGTPSNCNVLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYML 367
Query: 626 NGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIG 685
G+ P+EII+SV+ G+Y N GGQVDIT+GKFVFS S+AY+I+NG+IT PVKGATLIG
Sbjct: 368 AGESDPQEIIASVEKGIYCANLGGGQVDITSGKFVFSTSEAYLIENGRITTPVKGATLIG 427
Query: 686 HGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
+GP + +VSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 428 NGPEAMSRVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|395497140|ref|ZP_10428719.1| putative modulation of DNA gyrase-like protein [Pseudomonas sp.
PAMC 25886]
Length = 480
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 266/470 (56%), Positives = 348/470 (74%), Gaps = 3/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P + + L +LG++ +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGVTIESLQTVLGDLAGPGIDAADLYFQGQISESWALEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ L A ++ RSI+ G+ ++ + LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAITLEALGLAARAARSISRA--GQNGTVQAFSTQDVAQLYAPDNPLE 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
I+ EK++LL+RV+ R DPR+ +V +++G ++ IL+ DG + AD+RPLV+ V
Sbjct: 130 VISRAEKVELLKRVDAATRALDPRIQQVTVSMAGVWERILVASTDGGLAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
++IVE+NGRRE G G GGR +Y YF T+ ++ AL+NLEA PAPAG + VV
Sbjct: 190 SVIVEQNGRRERGGHGGGGRTDYRYFLTEDRAMGYAREALRQALVNLEAIPAPAGTLPVV 249
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+GTLA RRGS+++
Sbjct: 250 LGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGTLAGRRGSLSV 309
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML G
Sbjct: 310 DDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYMLGG 369
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ P EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+G
Sbjct: 370 ESDPAEIIASVKRGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGNG 429
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
P + KVSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 430 PEAMSKVSMVGNDLSLDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|422644473|ref|ZP_16707611.1| TldD protein [Pseudomonas syringae pv. maculicola str. ES4326]
gi|330958025|gb|EGH58285.1| TldD protein [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 479
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 266/471 (56%), Positives = 351/471 (74%), Gaps = 5/471 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L L +LG + +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 11 LLAPGGLSLDNLQSVLGELAGPGIDAADLYFQGMISESWSLEDGIVKEGSFNLDQGVGVR 70
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
A SG+KT F YS+ I+++ L A ++ RSI+ NG+++ + + LY+ + +
Sbjct: 71 AQSGEKTGFAYSNAITEDALRTAARAARSISRAGQNGRVQTFTSQD---VAQLYAPDNPL 127
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
++ EK++LL+R++ R D R+ +V +++G ++ IL+ DG + AD+RPLV+
Sbjct: 128 EVLSRAEKVELLKRIDVATRALDSRIQQVSVSMAGVWERILVAAADGSLAADVRPLVRFN 187
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKV 506
V++IVE+NGRRE G G GGR +Y YF TD ++ AL+NLEA PAPAG + V
Sbjct: 188 VSVIVEQNGRRERGGHGGGGRTDYRYFLTDDRAMGYAREALRQALVNLEAIPAPAGTLPV 247
Query: 507 VLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSIN 566
VLG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+R+ASK TIVD+GTLA RRGS++
Sbjct: 248 VLGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGERVASKLCTIVDDGTLAGRRGSLS 307
Query: 567 IDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLN 626
+DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML
Sbjct: 308 VDDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYMLG 367
Query: 627 GKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGH 686
G+ P+EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+
Sbjct: 368 GQSDPQEIIASVKRGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGN 427
Query: 687 GPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
GP + +VSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 428 GPEAMSRVSMVGNDLSLDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 478
>gi|388469196|ref|ZP_10143405.1| TldD protein [Pseudomonas synxantha BG33R]
gi|388005893|gb|EIK67159.1| TldD protein [Pseudomonas synxantha BG33R]
Length = 480
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 266/470 (56%), Positives = 347/470 (73%), Gaps = 3/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P + + L +LG++ +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGVTIESLQTVLGDLAGPGIDAADLYFQGQISESWALEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ L A ++ RSI+ G+ ++ + LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAITLEALGLAARAARSISRA--GQNGTVQAFSTQDVAQLYAPDNPLE 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
I+ EK++LL+RV+ R DPR+ +V +++G ++ IL+ DG + AD+RPLV+ V
Sbjct: 130 VISRAEKVELLKRVDAATRALDPRIQQVTVSMAGVWERILVASTDGGLAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
++IVE+NGRRE G G GGR +Y YF D ++ AL+NLEA PAPAG + VV
Sbjct: 190 SVIVEQNGRRERGGHGGGGRTDYRYFLADDRAMGYAREALRQALVNLEAIPAPAGTLPVV 249
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+GTLA RRGS+++
Sbjct: 250 LGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGTLAGRRGSLSV 309
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML G
Sbjct: 310 DDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYMLGG 369
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ P EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+G
Sbjct: 370 ESDPAEIIASVKRGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGNG 429
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
P + KVSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 430 PEAMSKVSMVGNDLSLDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|401765436|ref|YP_006580443.1| protease TldD [Enterobacter cloacae subsp. cloacae ENHKU01]
gi|400176970|gb|AFP71819.1| protease TldD [Enterobacter cloacae subsp. cloacae ENHKU01]
Length = 481
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 254/481 (52%), Positives = 353/481 (73%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEHLLAANGLSHQDLFSILGQLTERRLDYGDLYFQSSYHESWVLEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D IS L + ++ R+I + +G++K + + ++L
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQISLAALEQSAQAARTIVRDTGDGRVKTLGEVSH---SAL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ D + AD+
Sbjct: 120 YTSIDPLQSMSREEKLDILRRVDKVARAADKRVQEVSASLSGVYELILVAATDSTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLE 495
RPLV+L +++ V+ NG+RE G+SG GGR+ Y++F + + +V AL+NL
Sbjct: 180 RPLVRLSISVQVDDNGKRERGSSGGGGRFGYDWFLGDVDGEARADAWAKEAVRMALVNLN 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG+ ++S+ T+VD+
Sbjct: 240 AVAAPAGTFPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQIGQLVSSELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGS+ IDDEG P Q LIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTMPDRRGSVAIDDEGTPGQYNVLIENGVLKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV G++A NF GGQVDIT+GKFVFS S+AY+I+ GK+T
Sbjct: 360 MPRMTNTYMLPGKSTPQEIIESVDYGIFAPNFGGGQVDITSGKFVFSTSEAYLIEKGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
VKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KAVKGATLIGSGIEAMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|452749653|ref|ZP_21949413.1| peptidase U62, modulator of DNA gyrase [Pseudomonas stutzeri NF13]
gi|452006585|gb|EMD98857.1| peptidase U62, modulator of DNA gyrase [Pseudomonas stutzeri NF13]
Length = 480
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 269/470 (57%), Positives = 348/470 (74%), Gaps = 3/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L L +LG + VD AD YFQ +E+W+LE+GIVK G F + QGVGVR
Sbjct: 12 LLTPGGLGIDDLPGLLGELAGPGVDAADLYFQDQVSESWVLEDGIVKEGGFHLEQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+SG+KT F YS+ I+ + L A ++ RSIA +G+ ++ + + LY+ + +
Sbjct: 72 ALSGEKTGFAYSNAITADALRQAAQAARSIAR--SGRQGRVEVLSRAAFAPLYAQDNPLD 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
+ EK++LL+R++ R DPR+ +V +L+G ++ IL+ DG + ADIRPLV+ V
Sbjct: 130 GLGRAEKVELLKRIDVATRALDPRIKQVTVSLAGVWEHILVAGMDGGMAADIRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
++IVE+NGRRE G G GGR Y YF T+ ++ AL+NLEA PAPAG + VV
Sbjct: 190 SVIVEQNGRRERGGQGGGGRTGYQYFLTEDRAMGYAREALRQALVNLEAVPAPAGSLPVV 249
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LGPGW G+LLHEA+GHGLEGDFNRKGSSA+S IG+++AS TIVD+GTLA+RRGS+++
Sbjct: 250 LGPGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRIGQKVASSLCTIVDDGTLADRRGSLSV 309
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PTQCTTLIENGILKGY+QD +NARLM ++ TGN RRES+AH+P+PRMTNTYML G
Sbjct: 310 DDEGTPTQCTTLIENGILKGYIQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNTYMLAG 369
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ P+EII SVK G+Y + GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+G
Sbjct: 370 ESDPQEIIRSVKKGIYCASLGGGQVDITSGKFVFSTSEAYLIEDGKITTPVKGATLIGNG 429
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
P ++ +VSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID ITVGGT
Sbjct: 430 PEVMNRVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKIDEITVGGTG 479
>gi|386388962|ref|ZP_10073804.1| TldD/PmbA family protein [Haemophilus paraphrohaemolyticus HK411]
gi|385696696|gb|EIG27167.1| TldD/PmbA family protein [Haemophilus paraphrohaemolyticus HK411]
Length = 486
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 251/478 (52%), Positives = 347/478 (72%), Gaps = 13/478 (2%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P ++ L ++L + ++DYAD YFQ +++E+W LE+ I+K G F I++G GVR
Sbjct: 9 LLAPTGVELSHLSQVLDHFSSRQIDYADLYFQLSQDESWALEDSIIKEGGFYIDRGFGVR 68
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+SG KT F Y+D I + L ++ RSI+N+S G++ ++KN K+ Y+ + +
Sbjct: 69 AVSGKKTGFAYADQIGLSQLNQCAEAARSISNES-GQL-LVKNFKETTACQRYAAINPLE 126
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
+++ +K+ LL V+K+AR +DPRV++V AN+S Y+ +L+ DG + ADIRPLV+L V
Sbjct: 127 TLSREQKVDLLYLVDKVARAEDPRVVQVNANVSAIYEEMLVAATDGTLAADIRPLVRLSV 186
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-------TDMI----LEKCVSNSVNSALINLEAK 497
+++VE+NG+RE G+SG GGRY N+F +M+ E +V AL+NL A
Sbjct: 187 SVLVEENGKRERGSSGMGGRYGLNFFLEPHIINGEMVGYNRAEYLAKEAVRMALVNLGAM 246
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
PAPAG M +VLG GWPGILLHEA+GHGLEGDFNRK SS F+ IG+ + S TIVD+GT
Sbjct: 247 PAPAGTMPIVLGAGWPGILLHEAVGHGLEGDFNRKESSLFTGKIGELVTSPLCTIVDDGT 306
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
+ N RGS+ +DDEG P+Q LIENGILKGY+QD +NARLM ++ TGN RRES+AH+P+P
Sbjct: 307 IQNARGSMTVDDEGVPSQRNVLIENGILKGYLQDKLNARLMGVAPTGNGRRESYAHLPMP 366
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNTY+ G +E+I SV+ G+YA +FSGGQVDIT+GKFVFS ++AY+I+ GKIT P
Sbjct: 367 RMTNTYLTEGNHEFDEMIESVEYGIYAPHFSGGQVDITSGKFVFSTAEAYLIEKGKITKP 426
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
V GATLIG G + +++VSM+G M++DPG+G CGK+GQ VPVGVGQPT+K+D ITVGG
Sbjct: 427 VTGATLIGSGIDAMQQVSMVGKKMEIDPGIGTCGKEGQSVPVGVGQPTVKLDKITVGG 484
>gi|417352567|ref|ZP_12129751.1| TldD protein [Salmonella enterica subsp. enterica serovar Gaminara
str. A4-567]
gi|353566217|gb|EHC31763.1| TldD protein [Salmonella enterica subsp. enterica serovar Gaminara
str. A4-567]
Length = 495
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 263/494 (53%), Positives = 357/494 (72%), Gaps = 21/494 (4%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L+ + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLNHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFF--------------YSDDISKNTLINAVKSTRSIANQSNGKIK 367
+QGVGVRAISG+KT F+ Y+D IS L + ++ R+I + NG+ K
Sbjct: 63 DQGVGVRAISGEKTGFWPKRIRLGGEKTGFAYADQISLLALEQSAQAARTIVRE-NGEGK 121
Query: 368 IIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVI 427
+ K + + LY+ D + S++ EK+ +L RV+K AR D RV +V A+L+G Y++I
Sbjct: 122 V-KTLAAVAHQPLYTTLDPLQSMSREEKLDILRRVDKAAREADKRVQEVNASLTGVYELI 180
Query: 428 LITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKC 482
L+ DG + AD+RPLV+L V++ VE++G+RE G SG GGR+ Y YF ++ +
Sbjct: 181 LVAATDGTLAADVRPLVRLSVSVQVEEDGKRERGASGGGGRFGYEYFLADLDGEVRADAW 240
Query: 483 VSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIG 542
+V AL+NL A APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG
Sbjct: 241 AKEAVRMALVNLSAVAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQIG 300
Query: 543 KRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSI 602
+++AS T+VD+GT+ NRRGS+ IDDEG P Q LIENG+LKGYMQD +NARLM +
Sbjct: 301 EQVASALCTVVDDGTMMNRRGSVAIDDEGTPGQYNVLIENGVLKGYMQDKLNARLMGAAP 360
Query: 603 TGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFS 662
TGN RRES+AH+P+PRMTNTYML G+ P+EII SV+ G+YA NF GGQVDIT+GKFVFS
Sbjct: 361 TGNGRRESYAHLPMPRMTNTYMLAGQSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFS 420
Query: 663 ASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVG 722
S+AY+I+NGK+T PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVG
Sbjct: 421 TSEAYLIENGKVTTPVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVG 480
Query: 723 QPTLKIDSITVGGT 736
QPTLK+D++TVGGT
Sbjct: 481 QPTLKVDNLTVGGT 494
>gi|345301070|ref|YP_004830428.1| peptidase U62 modulator of DNA gyrase [Enterobacter asburiae LF7a]
gi|345095007|gb|AEN66643.1| peptidase U62 modulator of DNA gyrase [Enterobacter asburiae LF7a]
Length = 481
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 254/481 (52%), Positives = 353/481 (73%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEHLLAANGLSHQDLFSILGQLTERRLDYGDLYFQSSYHESWVLEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D IS L + ++ R+I + +G++K + ++ + L
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQISLAALEQSAQAARTIVRDTGDGRVKTLGEVQH---SPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTSIDPLQSMSREEKLDILRRVDKVARAADKRVQEVSASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLE 495
RPLV+L +++ V+ +G+RE G+SG GGR+ Y++F + + +V AL+NL
Sbjct: 180 RPLVRLSISVQVDDDGKRERGSSGGGGRFGYDWFLGDVDGETRADAWAKEAVRMALVNLN 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G ++S+ T+VD+
Sbjct: 240 AVAAPAGTFPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGLLVSSELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGS+ IDDEG P Q LIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTMRDRRGSVAIDDEGTPGQYNVLIENGVLKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV G++A NF GGQVDIT+GKFVFS S+AY+I+ GK+T
Sbjct: 360 MPRMTNTYMLPGKSTPQEIIESVDYGIFAPNFGGGQVDITSGKFVFSTSEAYLIEKGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
VKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+DS+TVGG
Sbjct: 420 KAVKGATLIGSGIEAMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDSLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|452880046|ref|ZP_21957082.1| hypothetical protein G039_27833 [Pseudomonas aeruginosa VRFPA01]
gi|452183461|gb|EME10479.1| hypothetical protein G039_27833 [Pseudomonas aeruginosa VRFPA01]
Length = 480
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 260/472 (55%), Positives = 348/472 (73%), Gaps = 7/472 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L+ L IL + +D AD YFQ +E+W+LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGLELDSLPGILHELSGPGIDAADLYFQSQVSESWMLEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
A SG+KT F YS+ I+ L A ++ RSI+ NG ++ K + + LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAITGEALKQAAQAARSISRAGQNGSVQAFKAVLPAR---LYAGENPL 128
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
++ EK++LL++++ R DPR+ +V +++G ++ IL+ +DG + ADIRPLV+
Sbjct: 129 DVLSRAEKVELLKKIDAATRALDPRIQQVTVSMAGVWEQILVAASDGSLAADIRPLVRFN 188
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF--TDMILEKCVSNSVNSALINLEAKPAPAGIMK 505
V++IVE+NGRRE G G GGR +Y YF D + ++ AL+NLEA PAPAG +
Sbjct: 189 VSVIVEQNGRRERGGHGGGGRTDYRYFLQEDRAM-GYAREALRQALVNLEAIPAPAGTLP 247
Query: 506 VVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSI 565
VV+G GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+++AS TIVD+GTLA RRGS+
Sbjct: 248 VVMGAGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRVGEKVASSLCTIVDDGTLAGRRGSL 307
Query: 566 NIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYML 625
++DDEG P+ C LIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML
Sbjct: 308 SVDDEGTPSNCNVLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYML 367
Query: 626 NGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIG 685
G+ P+EII+SV+ G+Y N GGQVDIT+GKFVFS S+AY+I+NG+IT PVKGATLIG
Sbjct: 368 AGESDPQEIIASVEKGIYCANLGGGQVDITSGKFVFSTSEAYLIENGRITTPVKGATLIG 427
Query: 686 HGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
+GP + +VSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 428 NGPEAMSRVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|395798219|ref|ZP_10477504.1| putative modulation of DNA gyrase-like protein [Pseudomonas sp.
Ag1]
gi|421142177|ref|ZP_15602153.1| Maf-like protein [Pseudomonas fluorescens BBc6R8]
gi|395337408|gb|EJF69264.1| putative modulation of DNA gyrase-like protein [Pseudomonas sp.
Ag1]
gi|404506571|gb|EKA20565.1| Maf-like protein [Pseudomonas fluorescens BBc6R8]
Length = 480
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 265/470 (56%), Positives = 348/470 (74%), Gaps = 3/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P + + L +LG++ +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGVTIESLQTVLGDLAGPGIDAADLYFQGQISESWALEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ L A ++ RSI+ G+ ++ + LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAITLEALGLAARAARSISRA--GQNGTVQAFSTQDVAQLYAPDNPLE 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
I+ EK++LL+RV+ R DPR+ +V +++G ++ IL+ DG + AD+RPLV+ V
Sbjct: 130 VISRAEKVELLKRVDAATRALDPRIQQVTVSMAGVWERILVASTDGGLAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
++IVE+NGRRE G G GGR +Y YF T+ ++ AL+NLEA PAPAG + VV
Sbjct: 190 SVIVEQNGRRERGGHGGGGRTDYRYFLTEDRAMGYAREALRQALVNLEAIPAPAGTLPVV 249
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +AS+ TIVD+GTLA RRGS+++
Sbjct: 250 LGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASRLCTIVDDGTLAGRRGSLSV 309
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML G
Sbjct: 310 DDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYMLGG 369
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ P EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+G
Sbjct: 370 ESDPAEIIASVKRGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGNG 429
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
P + KVSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 430 PEAMSKVSMVGNDLSLDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|303253038|ref|ZP_07339190.1| TldD-like protein [Actinobacillus pleuropneumoniae serovar 2 str.
4226]
gi|307246459|ref|ZP_07528532.1| hypothetical protein appser1_16570 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307248584|ref|ZP_07530599.1| hypothetical protein appser2_15520 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307255442|ref|ZP_07537249.1| hypothetical protein appser9_16690 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307259894|ref|ZP_07541608.1| hypothetical protein appser11_16820 [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|307262024|ref|ZP_07543679.1| hypothetical protein appser12_15740 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|302648102|gb|EFL78306.1| TldD-like protein [Actinobacillus pleuropneumoniae serovar 2 str.
4226]
gi|306852663|gb|EFM84895.1| hypothetical protein appser1_16570 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306854934|gb|EFM87122.1| hypothetical protein appser2_15520 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306861626|gb|EFM93613.1| hypothetical protein appser9_16690 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306866064|gb|EFM97938.1| hypothetical protein appser11_16820 [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306868307|gb|EFN00129.1| hypothetical protein appser12_15740 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 486
Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust.
Identities = 255/485 (52%), Positives = 341/485 (70%), Gaps = 13/485 (2%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN LL P L+ L K+L + ++DYAD YFQ +++E+W LE+ I+K G F I
Sbjct: 2 LNQVSESLLAPSGLELSHLSKVLNHFANRQIDYADLYFQLSQDESWSLEDSIIKEGGFYI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++G GVRA+SG+KT F Y+D I + L + RSI N S G++ + K+ K+ Y
Sbjct: 62 DRGFGVRAVSGEKTGFAYADQIGLSQLEQCATAARSITNAS-GQLSV-KSFKQTNAIKRY 119
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + +++ +K++LL V+K+AR +DPRVI+V A LS Y+ +L+ DG + ADIR
Sbjct: 120 ASVNPLDTLSREQKVELLHLVDKVARAEDPRVIQVNAGLSAVYEEMLVAATDGTLAADIR 179
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----------TDMILEKCVSNSVNSA 490
PLV+L V+++VE+N +RE G++G GGR+ N+F D +V A
Sbjct: 180 PLVRLSVSVLVEENSKRECGSAGAGGRFGLNWFFEPQVVNGEMTGDTRAVYLAKEAVRMA 239
Query: 491 LINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEI 550
L+NL A PAPAG M +VLG GWPGILLHEA+GHGLEGDFNRK SS F+ IG+ + S
Sbjct: 240 LVNLSAMPAPAGTMPIVLGAGWPGILLHEAVGHGLEGDFNRKESSLFTGKIGELVTSPLC 299
Query: 551 TIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRES 610
TIVD+GT+ N RGSI +DDEG P+Q LIENGILKGYMQD +NARLM ++ TGN RRES
Sbjct: 300 TIVDDGTVPNVRGSITVDDEGVPSQRNVLIENGILKGYMQDKLNARLMGVAPTGNGRRES 359
Query: 611 FAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIK 670
+AH+P+PRMTNTY+ G EE+I SV G+YA +FSGGQVDIT+GKFVFS ++AY+I+
Sbjct: 360 YAHLPMPRMTNTYLTEGSHSFEEMIESVDYGIYAPHFSGGQVDITSGKFVFSTAEAYLIE 419
Query: 671 NGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS 730
GKIT PV GATLIG G + +++VSM+G M+LDPG+G CGK+GQ VPVGVGQPT+K+D
Sbjct: 420 KGKITKPVTGATLIGSGIDAMQQVSMVGKKMELDPGIGTCGKEGQSVPVGVGQPTVKLDK 479
Query: 731 ITVGG 735
ITVGG
Sbjct: 480 ITVGG 484
>gi|387892083|ref|YP_006322380.1| TldD protein [Pseudomonas fluorescens A506]
gi|423689958|ref|ZP_17664478.1| TldD protein [Pseudomonas fluorescens SS101]
gi|387159841|gb|AFJ55040.1| TldD protein [Pseudomonas fluorescens A506]
gi|388000159|gb|EIK61488.1| TldD protein [Pseudomonas fluorescens SS101]
Length = 480
Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust.
Identities = 265/470 (56%), Positives = 347/470 (73%), Gaps = 3/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P + + L +LG++ +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGVTIESLQTVLGDLAGPGIDAADLYFQGQISESWALEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ L A ++ RSI+ G+ ++ + LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAITLEALGLAARAARSISRA--GQNGTVQAFSTQDVAQLYAPDNPLE 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
I+ EK++LL+R++ R DPR+ +V +++G ++ IL+ DG + AD+RPLV+ V
Sbjct: 130 VISRAEKVELLKRIDAATRALDPRIQQVTVSMAGVWERILVASTDGGLAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
++IVE+NGRRE G G GGR +Y YF D ++ AL+NLEA PAPAG + VV
Sbjct: 190 SVIVEQNGRRERGGHGGGGRTDYRYFLADDRAMGYAREALRQALVNLEAIPAPAGTLPVV 249
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+GTLA RRGS+++
Sbjct: 250 LGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGTLAGRRGSLSV 309
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML G
Sbjct: 310 DDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYMLGG 369
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ P EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+G
Sbjct: 370 QSDPAEIIASVKRGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGNG 429
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
P + KVSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 430 PEAMSKVSMVGNDLSLDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|418292559|ref|ZP_12904497.1| peptidase U62, modulator of DNA gyrase [Pseudomonas stutzeri ATCC
14405 = CCUG 16156]
gi|379063980|gb|EHY76723.1| peptidase U62, modulator of DNA gyrase [Pseudomonas stutzeri ATCC
14405 = CCUG 16156]
Length = 480
Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust.
Identities = 269/470 (57%), Positives = 348/470 (74%), Gaps = 3/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L L +LG + VD AD YFQ +E+W+LE+GIVK G F + QGVGVR
Sbjct: 12 LLTPGGLGIDDLPGLLGELAGPGVDAADLYFQDQVSESWVLEDGIVKEGGFHLEQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+SG+KT F YS+ I+ + L A ++ RSIA +G+ +K + + LYS + +
Sbjct: 72 ALSGEKTGFAYSNAITADALRQAAQAARSIAR--SGQQGEVKVLSRAAFAPLYSQDNPLD 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
+ EK++LL+R++ R DPR+ +V +L+G ++ IL+ DG + DIRPLV+ V
Sbjct: 130 GLTRAEKVELLKRIDVATRALDPRIKQVTVSLAGVWEHILVAGMDGGMATDIRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
++IVE+NGRRE G G GGR Y +F ++ ++ AL+NLEA PAPAG + VV
Sbjct: 190 SVIVEQNGRRERGGHGGGGRTGYQHFLSEDRAMGYAREALRQALVNLEAVPAPAGSLPVV 249
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LGPGW G+LLHEA+GHGLEGDFNRKGSSA+S IG+++ASK TIVD+GTLA+RRGS+++
Sbjct: 250 LGPGWSGVLLHEAVGHGLEGDFNRKGSSAYSGQIGQQVASKLCTIVDDGTLADRRGSLSV 309
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PTQCTTLIENGILKGY+QD +NARLM ++ TGN RRES+AH+P+PRMTNTYML G
Sbjct: 310 DDEGTPTQCTTLIENGILKGYIQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNTYMLAG 369
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ P+EII SVK G+Y + GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+G
Sbjct: 370 ESDPQEIIRSVKKGIYCASLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGNG 429
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
P ++ +VSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID ITVGGT
Sbjct: 430 PEVMNRVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKIDEITVGGTG 479
>gi|401678327|ref|ZP_10810293.1| putative protease TldD [Enterobacter sp. SST3]
gi|400214431|gb|EJO45351.1| putative protease TldD [Enterobacter sp. SST3]
Length = 481
Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust.
Identities = 253/481 (52%), Positives = 356/481 (74%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L+ + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEHLLAANGLNHQDLFSILGQLTERRLDYGDLYFQSSYHESWVLEDSIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D IS L + ++ R+I + +G++K + ++ ++L
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQISLAALEQSAQAARTIVRDTGDGRVKTLGEVQH---SAL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+
Sbjct: 120 YTSIDPLQSMSREEKLDILRRVDKVARAADKRVQEVSASLSGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLE 495
RPLV+L +++ V+++G+RE G+SG GGR+ Y++F + + +V AL+NL
Sbjct: 180 RPLVRLSISVQVDEDGKRERGSSGGGGRFGYDWFLGDVDGEARADAWAKEAVRMALVNLN 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG+ ++S+ T+VD+
Sbjct: 240 AVAAPAGSFPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQIGQLVSSELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ +RRGS+ IDDEG P Q LIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTMRDRRGSVAIDDEGTPGQYNVLIENGVLKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK P+EII SV G++A NF GGQVDIT+GKFVFS S+AY+I+ GK+T
Sbjct: 360 MPRMTNTYMLPGKSTPQEIIESVDYGIFAPNFGGGQVDITSGKFVFSTSEAYLIEKGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
VK ATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGG
Sbjct: 420 KAVKDATLIGSGIEAMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|303250989|ref|ZP_07337177.1| TldD-like protein [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|307253196|ref|ZP_07535072.1| hypothetical protein appser6_16950 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|302650146|gb|EFL80314.1| TldD-like protein [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|306859340|gb|EFM91377.1| hypothetical protein appser6_16950 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 486
Score = 520 bits (1338), Expect = e-144, Method: Compositional matrix adjust.
Identities = 255/485 (52%), Positives = 341/485 (70%), Gaps = 13/485 (2%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN LL P L+ L K+L + ++DYAD YFQ +++E+W LE+ I+K G F I
Sbjct: 2 LNQVSESLLAPSGLELSHLSKVLNHFANRQIDYADLYFQLSQDESWSLEDSIIKEGGFYI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++G GVRA+SG+KT F Y+D I + L + RSI N S G++ + K+ K+ Y
Sbjct: 62 DRGFGVRAVSGEKTGFAYADQIGLSQLEQCATAARSITNAS-GQLSV-KSFKQTNAIKRY 119
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + +++ +K++LL V+K+AR +DPRVI+V A LS Y+ +L+ DG + ADIR
Sbjct: 120 ASVNPLDTLSREQKVELLHLVDKVARAEDPRVIQVNAGLSAVYEEMLVAATDGTLAADIR 179
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----------TDMILEKCVSNSVNSA 490
PLV+L V+++VE+N +RE G++G GGR+ N+F D +V A
Sbjct: 180 PLVRLSVSVLVEENSKRERGSAGAGGRFGLNWFFEPQVVNGEMTGDTRAVYLAKEAVRMA 239
Query: 491 LINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEI 550
L+NL A PAPAG M +VLG GWPGILLHEA+GHGLEGDFNRK SS F+ IG+ + S
Sbjct: 240 LVNLSAMPAPAGTMPIVLGAGWPGILLHEAVGHGLEGDFNRKESSLFTGKIGELVTSPLC 299
Query: 551 TIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRES 610
TIVD+GT+ N RGSI +DDEG P+Q LIENGILKGYMQD +NARLM ++ TGN RRES
Sbjct: 300 TIVDDGTVPNVRGSITVDDEGVPSQRNVLIENGILKGYMQDKLNARLMGVAPTGNGRRES 359
Query: 611 FAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIK 670
+AH+P+PRMTNTY+ G EE+I SV G+YA +FSGGQVDIT+GKFVFS ++AY+I+
Sbjct: 360 YAHLPMPRMTNTYLTEGSHSFEEMIESVDYGIYAPHFSGGQVDITSGKFVFSTAEAYLIE 419
Query: 671 NGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS 730
GKIT PV GATLIG G + +++VSM+G M+LDPG+G CGK+GQ VPVGVGQPT+K+D
Sbjct: 420 KGKITKPVTGATLIGSGIDAMQQVSMVGKKMELDPGIGTCGKEGQSVPVGVGQPTVKLDK 479
Query: 731 ITVGG 735
ITVGG
Sbjct: 480 ITVGG 484
>gi|219871920|ref|YP_002476295.1| protease involved in Microcin B17 maturation and in sensitivity to
the DNA gyrase inhibitor LetD [Haemophilus parasuis
SH0165]
gi|219692124|gb|ACL33347.1| protease involved in Microcin B17 maturation and in sensitivity to
the DNA gyrase inhibitor LetD [Haemophilus parasuis
SH0165]
Length = 481
Score = 520 bits (1338), Expect = e-144, Method: Compositional matrix adjust.
Identities = 256/480 (53%), Positives = 344/480 (71%), Gaps = 8/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN + LL P L L K+L + ++DYAD YFQF+++E+W LE+ I+K G F I
Sbjct: 2 LNQVSNSLLLPSGLQLSDLTKVLDHFSSRQIDYADLYFQFSQDESWSLEDSIIKEGGFYI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVGVRA+SG+KT F Y+D IS + L + RSI Q +G++ ++K K+ Y
Sbjct: 62 DRGVGVRAVSGEKTGFAYADQISLSQLEQCAMAARSI-TQESGRL-LVKPFKETTAIKRY 119
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + +++ +K++LL V+K+AR +DPRVI+V ANLS Y+ +L++ DG + ADIR
Sbjct: 120 ASINPLDTLSREQKVELLHLVDKVARAEDPRVIQVNANLSAVYEEMLVSATDGTLAADIR 179
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF------TDMILEKCVSNSVNSALINLE 495
PLV+L ++++VE+NG+RE G++G GGR+ +F D +V A++NL
Sbjct: 180 PLVRLSISVLVEQNGKRERGSAGAGGRFGLEWFLAPHYTGDSRAVYLAKEAVRQAVVNLG 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M +VLG GWPGILLHEA+GHGLEGDFNRK SS F+N IG+ + S TIVD+
Sbjct: 240 AVAAPAGSMPIVLGAGWPGILLHEAVGHGLEGDFNRKESSMFTNRIGELVTSPLCTIVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ N RGSI +DDEG P+Q LIENGILKGYMQD +NA LM ++ TGN RRES+AH+P
Sbjct: 300 GTVPNMRGSITVDDEGVPSQRNVLIENGILKGYMQDKLNAHLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYM G +E+I SV+ GLYA +FSGGQVDIT+GKFVFS S+AY+I+ GKIT
Sbjct: 360 MPRMTNTYMTEGNHEFDEMIESVEFGLYAPHFSGGQVDITSGKFVFSTSEAYLIEKGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PV GATLIG G +++VSM+G M+LD G+G CGK+GQ VPVGVGQPT+K+D ITVGG
Sbjct: 420 KPVTGATLIGSGIEAMQQVSMVGKKMELDLGIGTCGKEGQSVPVGVGQPTVKLDKITVGG 479
>gi|422668755|ref|ZP_16728609.1| peptidase U62, modulator of DNA gyrase [Pseudomonas syringae pv.
aptata str. DSM 50252]
gi|330981118|gb|EGH79221.1| peptidase U62, modulator of DNA gyrase [Pseudomonas syringae pv.
aptata str. DSM 50252]
Length = 479
Score = 520 bits (1338), Expect = e-144, Method: Compositional matrix adjust.
Identities = 261/471 (55%), Positives = 346/471 (73%), Gaps = 5/471 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L L +LG++ +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 11 LLAPGGLSLDSLQSVLGDLAGPGIDAADLYFQGMISESWSLEDGIVKEGSFNLDQGVGVR 70
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
A SG+KT F YS+ I+ L A ++ RSI+ NG+++ + + LY+ + +
Sbjct: 71 AQSGEKTGFAYSNAITPEALRTAAQAARSISRAGQNGRVQAFTSQD---VAQLYAPDNPL 127
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
++ EK++LL+R++ R D R+ +V +++G ++ IL+ DG + AD+RPLV+
Sbjct: 128 EVLSRAEKVELLKRIDVATRALDSRIQQVSVSMAGVWERILVAAADGSLAADVRPLVRFN 187
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKV 506
V++IVE+NGRRE G G GG + YF TD ++ AL+NLEA PAPAG + V
Sbjct: 188 VSVIVEQNGRRERGGHGGGGGTDDRYFLTDDRAMGYAREALRQALVNLEAIPAPAGTLPV 247
Query: 507 VLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSIN 566
VLG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+GTLA RRGS++
Sbjct: 248 VLGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGTLAGRRGSLS 307
Query: 567 IDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLN 626
+DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+A +P+PRMTNTYML
Sbjct: 308 VDDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAPLPMPRMTNTYMLG 367
Query: 627 GKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGH 686
G+ P+EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+
Sbjct: 368 GQSDPQEIIASVKRGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGN 427
Query: 687 GPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
GP + +VSM+GND+ LD GVG CGKDGQ +PVGVGQPTLKID+ITVGGT
Sbjct: 428 GPEAMSRVSMVGNDLSLDSGVGTCGKDGQSLPVGVGQPTLKIDAITVGGTG 478
>gi|257465081|ref|ZP_05629452.1| TldD-like protein [Actinobacillus minor 202]
gi|257450741|gb|EEV24784.1| TldD-like protein [Actinobacillus minor 202]
Length = 486
Score = 520 bits (1338), Expect = e-144, Method: Compositional matrix adjust.
Identities = 255/478 (53%), Positives = 343/478 (71%), Gaps = 13/478 (2%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L+ L ++L + +DYAD YFQ + +E+W+LE+ I+K G F I++G GVR
Sbjct: 9 LLAPSGLELSHLSQVLDHFSTRHIDYADLYFQLSMDESWVLEDSIIKEGGFYIDKGFGVR 68
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+SG+KT F Y+D IS N L + RSI Q +G++ ++KN K+ Y + +
Sbjct: 69 AVSGEKTGFAYADQISLNQLEQCAVAARSI-TQESGQL-LVKNFKETTACKRYPSLNPLD 126
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ +K++LL V+K+AR +DPRVI+V AN+S Y+ +L+ +DG + ADIRPLV+L V
Sbjct: 127 TLTREQKVELLHLVDKVARAEDPRVIQVNANVSAVYEEMLVAASDGTLAADIRPLVRLSV 186
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-------TDMI----LEKCVSNSVNSALINLEAK 497
+++VE+NG+RE G++G GGRY N+F +M+ E +V AL+NL A
Sbjct: 187 SVLVEENGKRERGSAGAGGRYGLNWFFEPKVINGEMVGYNRAEYLAKEAVRIALVNLGAM 246
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
APAG M +VLG GWPGILLHEA+GHGLEGDFNRK SS F+ IG+ + S TIVD+GT
Sbjct: 247 LAPAGSMPIVLGAGWPGILLHEAVGHGLEGDFNRKESSLFTGKIGELVTSPLCTIVDDGT 306
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
+ + RGSI +DDEG P+Q LIENGILKGY+QD +NARLM ++ TGN RRES+AH+P+P
Sbjct: 307 IQDARGSITVDDEGVPSQRNVLIENGILKGYIQDKLNARLMGVAPTGNGRRESYAHLPMP 366
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNTY+ G EE+I SV+ GLYA +FSGGQVDIT+GKFVFS ++AY+I+ GKIT P
Sbjct: 367 RMTNTYLTEGNHDFEEMIESVEYGLYAPHFSGGQVDITSGKFVFSTAEAYLIEKGKITQP 426
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
V GATLIG G +++VSM+G M+LDPG+G CGK+GQ VPVGVGQPT+K+D ITVGG
Sbjct: 427 VTGATLIGSGIEAMQQVSMVGKKMELDPGIGTCGKEGQSVPVGVGQPTVKLDKITVGG 484
>gi|116052506|ref|YP_792819.1| hypothetical protein PA14_58070 [Pseudomonas aeruginosa UCBPP-PA14]
gi|313107060|ref|ZP_07793262.1| putative tldD protein [Pseudomonas aeruginosa 39016]
gi|386064080|ref|YP_005979384.1| hypothetical protein NCGM2_1128 [Pseudomonas aeruginosa NCGM2.S1]
gi|421176616|ref|ZP_15634278.1| hypothetical protein PACI27_4820 [Pseudomonas aeruginosa CI27]
gi|115587727|gb|ABJ13742.1| putative tldD protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|310879764|gb|EFQ38358.1| putative tldD protein [Pseudomonas aeruginosa 39016]
gi|348032639|dbj|BAK87999.1| hypothetical protein NCGM2_1128 [Pseudomonas aeruginosa NCGM2.S1]
gi|404530620|gb|EKA40609.1| hypothetical protein PACI27_4820 [Pseudomonas aeruginosa CI27]
Length = 480
Score = 520 bits (1338), Expect = e-144, Method: Compositional matrix adjust.
Identities = 260/472 (55%), Positives = 347/472 (73%), Gaps = 7/472 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L+ L IL + +D AD YFQ +E+W+LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGLELDSLPGILHELNGPGIDAADLYFQSQVSESWMLEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
A SG+KT F YS+ I+ L A + RSI+ NG ++ K + + LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAITAEALKQAAVAARSISRAGQNGSVQAFKAVAPAR---LYAGENPL 128
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
++ EK++LL++++ R DPR+ +V +++G ++ IL+ +DG + ADIRPLV+
Sbjct: 129 DVLSRAEKVELLKQIDAATRALDPRIQQVTVSMAGVWEQILVAASDGSLAADIRPLVRFN 188
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF--TDMILEKCVSNSVNSALINLEAKPAPAGIMK 505
V++IVE+NGRRE G G GGR +Y YF D + ++ AL+NLEA PAPAG +
Sbjct: 189 VSVIVEQNGRRERGGHGGGGRTDYRYFLQEDRAM-GYAREALRQALVNLEAIPAPAGTLP 247
Query: 506 VVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSI 565
VV+G GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+++AS TIVD+GTLA RRGS+
Sbjct: 248 VVMGAGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRVGEKVASSLCTIVDDGTLAGRRGSL 307
Query: 566 NIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYML 625
++DDEG P+ C LIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML
Sbjct: 308 SVDDEGTPSNCNVLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYML 367
Query: 626 NGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIG 685
G+ P+EII+SV+ G+Y N GGQVDIT+GKFVFS S+AY+I+NG+IT PVKGATLIG
Sbjct: 368 AGESDPQEIIASVEKGIYCANLGGGQVDITSGKFVFSTSEAYLIENGRITTPVKGATLIG 427
Query: 686 HGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
+GP + +VSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 428 NGPEAMSRVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|167625737|ref|YP_001676031.1| peptidase U62 modulator of DNA gyrase [Shewanella halifaxensis
HAW-EB4]
gi|167355759|gb|ABZ78372.1| peptidase U62 modulator of DNA gyrase [Shewanella halifaxensis
HAW-EB4]
Length = 482
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 255/480 (53%), Positives = 352/480 (73%), Gaps = 10/480 (2%)
Query: 263 NIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSIN 322
+ +S+L + +D+ L L + ++++D++D YFQ +++E+W+LE+GIVK G+F I
Sbjct: 6 QVGQSLLQDGLAIDD--LQSYLKRIHEHQIDFSDLYFQGSRHESWVLEDGIVKDGSFHIE 63
Query: 323 QGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYS 382
+GVGVRAISG+KT F Y+D+I+ +T + + G + ++ + +LY
Sbjct: 64 RGVGVRAISGEKTGFAYADEITPAA--LEAAATAARGIATAGGNAQVNAWQQQQSKALYI 121
Query: 383 FTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRP 442
+D I+++ +KI+LL++ + R D R+I+V+ +LSG ++ IL+ +DG + ADIRP
Sbjct: 122 SSDPIAAMEEVKKIELLKQADVYIRSLDSRIIQVVVSLSGVHEEILVAASDGTLAADIRP 181
Query: 443 LVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI---LEKC---VSNSVNSALINLEA 496
LV+ ++I+E++G+RE G SG GGR++Y+ + L C +V A +NL A
Sbjct: 182 LVRFNCSVILEEDGKRERGASGGGGRHDYSVLLEDDSDGLPYCFGFAREAVRQAQVNLHA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSSAFS +G+++AS+ +T+VD+G
Sbjct: 242 IDAPAGEMPVVLGAGWPGVLLHEAVGHGLEGDFNRKGSSAFSGKVGQKVASELVTVVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS++IDDEG PTQ T LIENGILKGYMQD +NARLM TGN RRES+AH+P+
Sbjct: 302 TMDNRRGSLSIDDEGVPTQKTVLIENGILKGYMQDKLNARLMGEQSTGNGRRESYAHLPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYM G+ P EII SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NG+IT
Sbjct: 362 PRMTNTYMEAGESDPAEIIKSVKKGVYAPNFGGGQVDITSGKFVFSASEAYLIENGEITQ 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
+KGATLIG+GP + ++SM+GND+ LD GVGVCGKDGQ VPVGVGQPTLK+D +TVGGT
Sbjct: 422 AIKGATLIGNGPESMSQISMVGNDLALDKGVGVCGKDGQSVPVGVGQPTLKLDKLTVGGT 481
>gi|422604974|ref|ZP_16676989.1| TldD protein [Pseudomonas syringae pv. mori str. 301020]
gi|330888631|gb|EGH21292.1| TldD protein [Pseudomonas syringae pv. mori str. 301020]
Length = 479
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 265/471 (56%), Positives = 350/471 (74%), Gaps = 5/471 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L L +LG + +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 11 LLAPGGLSLDSLQSVLGELAGPGIDAADLYFQGMISESWSLEDGIVKEGSFNLDQGVGVR 70
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
A SG+KT F YS+ I+++ L A ++ RSI+ NG+++ + + LY+ + +
Sbjct: 71 AQSGEKTGFAYSNAITEDALRTAARAARSISRAGQNGRVQAFTSQD---VAQLYAPDNPL 127
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
++ EK++LL+R++ R D R+ +V +++G ++ IL+ DG + AD+RPLV+
Sbjct: 128 EVLSRAEKVELLKRIDVATRALDSRIQQVSVSMAGVWERILVAAADGSLAADVRPLVRFN 187
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKV 506
V++IVEKNGRRE G G GGR +Y YF TD ++ AL+NLEA PAPAG + V
Sbjct: 188 VSVIVEKNGRRERGGHGGGGRTDYRYFLTDDRAMGYAREALRQALVNLEAIPAPAGTLPV 247
Query: 507 VLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSIN 566
VLG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+GTLA RRGS++
Sbjct: 248 VLGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGTLAGRRGSLS 307
Query: 567 IDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLN 626
+DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML
Sbjct: 308 VDDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYMLG 367
Query: 627 GKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGH 686
G+ P+EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+
Sbjct: 368 GQSDPQEIIASVKRGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGN 427
Query: 687 GPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
GP + +VSM+GND+ LD GVG CGKDGQ +PVGVGQPTLKID+ITVGGT
Sbjct: 428 GPEAMSRVSMVGNDLSLDSGVGTCGKDGQSLPVGVGQPTLKIDAITVGGTG 478
>gi|312958985|ref|ZP_07773504.1| TldD [Pseudomonas fluorescens WH6]
gi|311286755|gb|EFQ65317.1| TldD [Pseudomonas fluorescens WH6]
Length = 480
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 264/472 (55%), Positives = 350/472 (74%), Gaps = 7/472 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P + + L +LG++ +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGVTIESLQTVLGDLAGPGIDAADLYFQGQISESWALEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ L A ++ RSI+ G+ ++ + LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAITLEALGLAARAARSISRA--GQNGTVQAFSTQDVAQLYAPDNPLE 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
I+ EK++LL+R++ R DPR+ +V +++G ++ IL+ DG + AD+RPLV+ V
Sbjct: 130 VISRAEKVELLKRIDAATRALDPRIQQVTVSMAGVWERILVASTDGGLAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVS---NSVNSALINLEAKPAPAGIMK 505
++IVE+NGRRE G G GGR +Y YF + ++ + ++ AL+NLEA PAPAG +
Sbjct: 190 SVIVEQNGRRERGGHGGGGRTDYRYF--LAEDRAMGYAREALRQALVNLEAIPAPAGTLP 247
Query: 506 VVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSI 565
VVLG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+GTLA RRGS+
Sbjct: 248 VVLGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGTLAGRRGSL 307
Query: 566 NIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYML 625
++DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML
Sbjct: 308 SVDDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYML 367
Query: 626 NGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIG 685
G+ P EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG
Sbjct: 368 GGQSDPAEIIASVKRGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIG 427
Query: 686 HGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
+GP + KVSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 428 NGPEAMSKVSMVGNDLSLDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|388546273|ref|ZP_10149549.1| C69 family peptidase [Pseudomonas sp. M47T1]
gi|388275510|gb|EIK95096.1| C69 family peptidase [Pseudomonas sp. M47T1]
Length = 480
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 267/472 (56%), Positives = 349/472 (73%), Gaps = 7/472 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L L +LG + +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGLTLDSLQSVLGELAGPGIDAADLYFQGQISESWSLEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
A SG+KT F YS+ I+++ L+ A ++ RSI+ NG+++ + + LY+ + +
Sbjct: 72 AQSGEKTGFAYSNTITQDALLQAARAARSISRAGQNGRVQAFSSQD---VAQLYAPDNPL 128
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
++ EK++LL+RV+ R DPR+ +V +++G ++ IL+ DG + AD+RPLV+
Sbjct: 129 DVLSRAEKVELLKRVDVATRALDPRIQQVSVSMAGVWERILVAAADGSLAADVRPLVRFN 188
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF--TDMILEKCVSNSVNSALINLEAKPAPAGIMK 505
V++IVE+NGRRE G G GGR +Y YF D + ++ AL+NLEA PAPAG +
Sbjct: 189 VSVIVEQNGRRERGGHGGGGRTDYRYFLQEDRAM-GYAREALRQALVNLEAIPAPAGTLP 247
Query: 506 VVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSI 565
VVLG GW G+LLHEA+GHGLEGDFNRKGSS +S +G+ +ASK TIVD+GTLA RRGS+
Sbjct: 248 VVLGSGWSGVLLHEAVGHGLEGDFNRKGSSNYSGRMGEMVASKLCTIVDDGTLAGRRGSL 307
Query: 566 NIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYML 625
++DDEG PTQCTTLIENG+L GYMQD +NARLM M+ TGN RRES+AH+P+PRMTNTYML
Sbjct: 308 SVDDEGTPTQCTTLIENGVLTGYMQDKLNARLMGMAATGNGRRESYAHLPMPRMTNTYML 367
Query: 626 NGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIG 685
G+ P EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG
Sbjct: 368 GGESDPAEIIASVKRGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIG 427
Query: 686 HGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
+GP + KVSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 428 NGPEAMSKVSMVGNDLSLDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|398927878|ref|ZP_10663101.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM48]
gi|398169193|gb|EJM57182.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM48]
Length = 480
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 264/471 (56%), Positives = 346/471 (73%), Gaps = 5/471 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P + + L +LG++ +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGVTIESLQGVLGDLAGPGIDAADLYFQGQISESWALEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ L A ++ SI+ G+ ++ + LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAITLEALGAAARAAGSISRA--GQHGTVQAFTSQDVAQLYAPDNPLE 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
+ EK+ LL+RV+ R DPR+ +V +++G ++ IL+ DG + AD+RPLV+ V
Sbjct: 130 VLTRAEKVDLLKRVDAATRALDPRIQQVTVSMAGVWERILVASTDGGLAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF--TDMILEKCVSNSVNSALINLEAKPAPAGIMKV 506
++IVE+NGRRE G G GGR +Y YF D + ++ AL+NLEA PAPAG + V
Sbjct: 190 SVIVEQNGRRERGGHGGGGRTDYRYFLGEDRAM-GYAREALRQALVNLEAIPAPAGTLPV 248
Query: 507 VLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSIN 566
VLG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +AS+ TIVD+GTLA RRGS++
Sbjct: 249 VLGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASRLCTIVDDGTLAGRRGSLS 308
Query: 567 IDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLN 626
+DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML
Sbjct: 309 VDDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYMLA 368
Query: 627 GKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGH 686
G+ PEEII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+
Sbjct: 369 GESDPEEIIASVKRGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGN 428
Query: 687 GPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
GP + KVSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 429 GPEAMSKVSMVGNDLSLDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|52424835|ref|YP_087972.1| TldD protein [Mannheimia succiniciproducens MBEL55E]
gi|52306887|gb|AAU37387.1| TldD protein [Mannheimia succiniciproducens MBEL55E]
Length = 482
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 256/481 (53%), Positives = 343/481 (71%), Gaps = 5/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN LL P +L K L I + +DY+D YFQ +++E+W+LE+GI+K G F I
Sbjct: 2 LNKVVESLLTPSNLSVKDLPNIFDQLAHRHLDYSDLYFQLSQDESWVLEDGIIKEGGFHI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVGVRAISG+KT F YSD I+ +L + + IA G+I ++ Y
Sbjct: 62 DRGVGVRAISGEKTGFAYSDQINLTSLQQCANAVKGIAPAEQGRIITPTGFNRVNPILRY 121
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + ++ +KI+LL V+K AR P V +V A+LS Y+ +L+ DG + ADIR
Sbjct: 122 AAVNPLDTLTKEQKIELLYLVDKTARGMSPYVSRVSASLSSIYEEVLVAATDGTLAADIR 181
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILE--KCVS---NSVNSALINLEA 496
PLV+L V+++VEK G+RE G++G GGR+ N+F + + VS +V AL+NLEA
Sbjct: 182 PLVRLSVSVLVEKEGKRERGSAGAGGRFGLNWFLESFEGEVRAVSFTKEAVRQALVNLEA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
PAPAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS FS IG+ + S TIVD+G
Sbjct: 242 IPAPAGLMPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSLFSGKIGELVTSPLCTIVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL NRRGS+ IDDEG P+Q LIENGILKGYMQD MNARLM ++ TGN RRES+A++P+
Sbjct: 302 TLENRRGSLTIDDEGTPSQRNVLIENGILKGYMQDKMNARLMGVAPTGNGRRESYANLPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML+G E++I S+ G++A++F GGQVDIT+GKF FS ++AY+I+ GKIT
Sbjct: 362 PRMTNTYMLSGDSKFEDLIGSIDRGIFASHFGGGQVDITSGKFTFSTTEAYLIEKGKITR 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G ++++VSM+ ++M++D G+GVCGK+GQ VPVGVGQP LKI+ ITVGGT
Sbjct: 422 PVKGATLIGSGIEVMQQVSMVADNMEIDHGIGVCGKEGQSVPVGVGQPALKIERITVGGT 481
Query: 737 N 737
N
Sbjct: 482 N 482
>gi|170728716|ref|YP_001762742.1| peptidase U62 modulator of DNA gyrase [Shewanella woodyi ATCC
51908]
gi|169814063|gb|ACA88647.1| peptidase U62 modulator of DNA gyrase [Shewanella woodyi ATCC
51908]
Length = 482
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 259/457 (56%), Positives = 348/457 (76%), Gaps = 10/457 (2%)
Query: 287 MFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKN 346
+ ++ VD++D YFQ +++E+W+LE+GIVK G+F I +GVGVRAI+G+KT F Y+D+I+ +
Sbjct: 28 IHQHDVDFSDLYFQGSRHESWVLEDGIVKEGSFHIERGVGVRAITGEKTGFAYADEITPS 87
Query: 347 TLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKI 405
LI + ++ RSIA+ +NG ++ K+ + + LY D I+++ +KI LL+ +
Sbjct: 88 ALIASAEAARSIASAGANGSVQAWKSQE---VKPLYQSADPIAAMEEVKKIALLKEADAY 144
Query: 406 ARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGC 465
R D R+I+V+ +LSG ++ IL+ +DG + ADIRPLV+ ++I+E G+RE G SG
Sbjct: 145 IRSLDSRIIQVVVSLSGVHEEILVAASDGTLAADIRPLVRFNCSVILEDEGKRERGASGG 204
Query: 466 GGRYNYNYF---TDMILEKCVSNS---VNSALINLEAKPAPAGIMKVVLGPGWPGILLHE 519
GGR+ Y D L KC S++ V A +NL A APAG M VVLG GWPG+LLHE
Sbjct: 205 GGRHGYEALMETDDAGLPKCFSSAREAVRQAQVNLTAIDAPAGQMPVVLGAGWPGVLLHE 264
Query: 520 AIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTL 579
A+GHGLEGDFNRKGSSAFS +G+++ASK +T+VD+GT+ANRRGS++IDDEG +Q T L
Sbjct: 265 AVGHGLEGDFNRKGSSAFSGLVGQQVASKLVTVVDDGTIANRRGSLSIDDEGVVSQKTVL 324
Query: 580 IENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVK 639
I++GILKGYMQD +NARLM TGN RRES+AH+P+PRMTNTYM G+ P EII SVK
Sbjct: 325 IQDGILKGYMQDKLNARLMGEQSTGNGRRESYAHLPMPRMTNTYMEAGESDPAEIIKSVK 384
Query: 640 NGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGN 699
NG+YA NF GGQVDIT+GKFVFSAS+AY+I+NG++T +KGATLIG+GP + ++SM+GN
Sbjct: 385 NGIYAPNFGGGQVDITSGKFVFSASEAYLIENGEVTQAIKGATLIGNGPEAMGEISMVGN 444
Query: 700 DMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
D+ LD GVGVCGKDGQ VPVGVGQPTLK+DS+TVGGT
Sbjct: 445 DLALDNGVGVCGKDGQSVPVGVGQPTLKLDSLTVGGT 481
>gi|340000915|ref|YP_004731799.1| TldD protein [Salmonella bongori NCTC 12419]
gi|339514277|emb|CCC32040.1| TldD protein [Salmonella bongori NCTC 12419]
Length = 481
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 264/481 (54%), Positives = 354/481 (73%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+QGVGVRA+SG+KT F Y+D IS L + ++ R+I S GK+K + + L
Sbjct: 63 DQGVGVRAVSGEKTGFAYADQISLQALEQSAQAARTIVRDSGEGKVKTLAAVDH---QPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EK+ +L RV+K AR D RV +V A+L+G Y++IL+ DG + AD+
Sbjct: 120 YTTLDPLQSMSREEKLDILRRVDKAAREADKRVQEVNASLTGVYELILVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V++ VE++G+RE G SG GGR+ Y+YF D+ + +V AL+NL
Sbjct: 180 RPLVRLSVSVQVEEDGKRERGASGGGGRFGYDYFLADVDGDVRADAWAKEAVRMALVNLA 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG+++AS T+VD+
Sbjct: 240 AVAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQIGEQVASTLCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ NRRGS+ IDDEG P Q LIENG+LKGYMQD +NARLM + TGN RRES+AH+P
Sbjct: 300 GTMMNRRGSVAIDDEGTPGQYNVLIENGVLKGYMQDKLNARLMGSAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G+ P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 360 MPRMTNTYMLAGQSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+DS+TVGG
Sbjct: 420 TPVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDSLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|392422372|ref|YP_006458976.1| peptidase U62, modulator of DNA gyrase [Pseudomonas stutzeri CCUG
29243]
gi|390984560|gb|AFM34553.1| peptidase U62, modulator of DNA gyrase [Pseudomonas stutzeri CCUG
29243]
Length = 480
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 270/470 (57%), Positives = 346/470 (73%), Gaps = 3/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L L +LG + VD AD YFQ +E+W+LE+GIVK G F + QGVGVR
Sbjct: 12 LLTPGGLGIDDLPGLLGELAGPGVDAADLYFQDQVSESWVLEDGIVKEGGFHLEQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+SG+KT F YS+ I+ + L A ++ RSIA +G+ +K + + LY+ + +
Sbjct: 72 ALSGEKTGFAYSNAITADALRQAAQAARSIAR--SGQQGQVKVLSRAAFAPLYAQDNPLD 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
+ EK++LL+R++ R DPR+ +V +L G ++ IL+ DG + ADIRPLV+ V
Sbjct: 130 GLGRAEKVELLKRIDVATRALDPRIKQVTVSLVGVWEHILVAGMDGGMAADIRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
++IVE+NGRRE G G GGR Y YF T+ ++ AL+NLEA PAPAG + VV
Sbjct: 190 SVIVEQNGRRERGGQGGGGRTGYQYFLTEDRAMGYAREALRQALVNLEAVPAPAGSLPVV 249
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LGPGW G+LLHEA+GHGLEGDFNRKGSSA+S IG+++AS TIVD+GTLA+RRGS++I
Sbjct: 250 LGPGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRIGQKVASSLCTIVDDGTLADRRGSLSI 309
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PTQCTTLIENGILKGY+QD +NARLM ++ TGN RRES+AH+P+PRMTNTYML G
Sbjct: 310 DDEGTPTQCTTLIENGILKGYIQDKLNARLMGVTPTGNGRRESYAHLPMPRMTNTYMLAG 369
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ P+EII SVK G+Y + GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+G
Sbjct: 370 ESDPQEIICSVKKGIYCASLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGNG 429
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
P ++ +VSM+GND+ LD GVG CGKDGQ VPVGVGQPTL ID ITVGGT
Sbjct: 430 PEVMNRVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLMIDEITVGGTG 479
>gi|46143543|ref|ZP_00135034.2| COG0312: Predicted Zn-dependent proteases and their inactivated
homologs [Actinobacillus pleuropneumoniae serovar 1 str.
4074]
gi|126209004|ref|YP_001054229.1| TldD-like protein [Actinobacillus pleuropneumoniae serovar 5b str.
L20]
gi|126097796|gb|ABN74624.1| TldD-like protein [Actinobacillus pleuropneumoniae serovar 5b str.
L20]
Length = 486
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 255/485 (52%), Positives = 341/485 (70%), Gaps = 13/485 (2%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN LL P L+ L K+L + ++DYAD YFQ +++E+W LE+ I+K G F I
Sbjct: 2 LNQVSESLLAPSGLELSHLSKVLNHFANRQIDYADLYFQLSQDESWSLEDSIIKEGGFYI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++G GVRA+SG+KT F Y+D I + L + RSI N S G++ + K+ K+ Y
Sbjct: 62 DRGFGVRAVSGEKTGFAYADQIGLSQLEQCATAARSITNAS-GQLSV-KSFKQTNAIKRY 119
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + +++ +K++LL V+K+AR +DPRVI+V A LS Y+ +L+ DG + ADIR
Sbjct: 120 ASVNPLDTLSREQKVELLHLVDKVARAEDPRVIQVNAGLSAVYEEMLVAATDGTLAADIR 179
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----------TDMILEKCVSNSVNSA 490
PLV+L V+++VE+N +RE G++G GGR+ N+F D +V A
Sbjct: 180 PLVRLSVSVLVEENSKRERGSAGAGGRFGLNWFFEPQVVNGEMTGDTRAVYLAKEAVRMA 239
Query: 491 LINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEI 550
L+NL A PAPAG M +VLG GWPGILLHEA+GHGLEGDFNRK SS F+ IG+ + S
Sbjct: 240 LVNLSAMPAPAGTMPIVLGAGWPGILLHEAVGHGLEGDFNRKESSLFTGKIGELVTSPLC 299
Query: 551 TIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRES 610
TIVD+GT+ N RGSI +DDEG P+Q LIENGILKGYMQD +NARLM ++ TGN RRES
Sbjct: 300 TIVDDGTVPNVRGSITVDDEGVPSQRNVLIENGILKGYMQDKLNARLMGVAPTGNGRRES 359
Query: 611 FAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIK 670
+AH+P+PRMTNTY+ G EE+I SV G+YA +FSGGQVDIT+GKFVFS ++AY+I+
Sbjct: 360 YAHLPMPRMTNTYLTEGSHSFEEMIESVDYGIYAPHFSGGQVDITSGKFVFSTAEAYLIE 419
Query: 671 NGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS 730
GKIT PV GATLIG G + +++VSM+G M+LDPG+G CGK+GQ VPVGVGQPT+K+D
Sbjct: 420 KGKITKPVIGATLIGSGIDAMQQVSMVGKKMELDPGIGTCGKEGQSVPVGVGQPTVKLDK 479
Query: 731 ITVGG 735
ITVGG
Sbjct: 480 ITVGG 484
>gi|107099941|ref|ZP_01363859.1| hypothetical protein PaerPA_01000962 [Pseudomonas aeruginosa PACS2]
gi|421170226|ref|ZP_15628198.1| hypothetical protein PABE177_4982 [Pseudomonas aeruginosa ATCC
700888]
gi|404524086|gb|EKA34445.1| hypothetical protein PABE177_4982 [Pseudomonas aeruginosa ATCC
700888]
Length = 480
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 261/472 (55%), Positives = 347/472 (73%), Gaps = 7/472 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L+ L IL + +D AD YFQ +E+W+LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGLELDSLPGILHELNGPGIDAADLYFQSQVSESWMLEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
A SG+KT F YS+ I+ L A + RSI+ NG ++ K + + LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAITAEALKQAAVAARSISRAGQNGSVQAFKAVVPAR---LYAGENPL 128
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
++ EK++LL++++ R DPR+ +V +++G ++ IL+ +DG + ADIRPLV+
Sbjct: 129 DVLSRAEKVELLKQIDAATRALDPRIQQVTVSMAGVWEQILVAASDGSLAADIRPLVRFN 188
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF--TDMILEKCVSNSVNSALINLEAKPAPAGIMK 505
V++IVE+NGRRE G G GGR +Y YF D + ++ AL+NLEA PAPAG +
Sbjct: 189 VSVIVEQNGRRERGGHGGGGRTDYRYFLQEDRAM-GYAREALRQALVNLEAIPAPAGTLP 247
Query: 506 VVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSI 565
VV+G GW G+LLHEA+GHGLEGDFNRKGSSA+S IG+++AS TIVD+GTLA RRGS+
Sbjct: 248 VVMGAGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRIGEKVASSLCTIVDDGTLAGRRGSL 307
Query: 566 NIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYML 625
++DDEG P+ C LIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML
Sbjct: 308 SVDDEGTPSNCNVLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYML 367
Query: 626 NGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIG 685
G+ P+EII+SV+ G+Y N GGQVDIT+GKFVFS S+AY+I+NG+IT PVKGATLIG
Sbjct: 368 AGESDPQEIIASVEKGIYCANLGGGQVDITSGKFVFSTSEAYLIENGRITTPVKGATLIG 427
Query: 686 HGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
+GP + +VSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 428 NGPEAMSRVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|395652431|ref|ZP_10440281.1| putative modulation of DNA gyrase-like protein [Pseudomonas
extremaustralis 14-3 substr. 14-3b]
Length = 480
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 265/472 (56%), Positives = 349/472 (73%), Gaps = 7/472 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P + + L +LG++ +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGVTIESLQTVLGDLAGPGIDAADLYFQGQISESWALEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ L A ++ RSI+ G+ ++ + LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAITLEALGLAARAARSISRA--GQNGTVQAFSTQDVAQLYAPDNPLE 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
I+ EK+ LL+R++ R DPR+ +V +++G ++ IL+ DG + AD+RPLV+ V
Sbjct: 130 VISRAEKVDLLKRIDAATRALDPRIQQVTVSMAGVWERILVASTDGSLAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVS---NSVNSALINLEAKPAPAGIMK 505
++IVE+NGRRE G G GGR +Y YF + ++ + ++ AL+NLEA PAPAG
Sbjct: 190 SVIVEQNGRRERGGHGGGGRTDYRYF--LAEDRAMGYAREALRQALVNLEAIPAPAGTFP 247
Query: 506 VVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSI 565
VVLG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+GTLA RRGS+
Sbjct: 248 VVLGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGTLAGRRGSL 307
Query: 566 NIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYML 625
+IDDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML
Sbjct: 308 SIDDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYML 367
Query: 626 NGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIG 685
G+ PEEII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG
Sbjct: 368 AGESDPEEIIASVKRGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIG 427
Query: 686 HGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
+GP + KVSM+G+D+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 428 NGPEAMSKVSMVGSDLSLDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|219871898|ref|YP_002476273.1| protease involved in Microcin B17 maturation and in sensitivity to
the DNA gyrase inhibitor LetD [Haemophilus parasuis
SH0165]
gi|219692102|gb|ACL33325.1| protease involved in Microcin B17 maturation and in sensitivity to
the DNA gyrase inhibitor LetD [Haemophilus parasuis
SH0165]
Length = 481
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 255/480 (53%), Positives = 344/480 (71%), Gaps = 8/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN + LL P L L K+L + ++DYAD YFQF+++E+W LE+ I+K G F I
Sbjct: 2 LNQVSNSLLLPSGLQLSDLAKVLDHFSSRQIDYADLYFQFSQDESWSLEDSIIKEGGFYI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVGVRA+SG+KT F Y+D IS + L + RSI Q +G++ ++K ++ Y
Sbjct: 62 DRGVGVRAVSGEKTGFAYADQISLSQLEQCAMAARSI-TQESGRL-LVKPFEETTAIKRY 119
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + +++ +K++LL V+K+AR +DPRVI+V ANLS Y+ +L++ DG + ADIR
Sbjct: 120 ASINPLDTLSREQKVELLHLVDKVARAEDPRVIQVNANLSAVYEEMLVSATDGTLAADIR 179
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF------TDMILEKCVSNSVNSALINLE 495
PLV+L ++++VE+NG+RE G++G GGR+ +F D +V A++NL
Sbjct: 180 PLVRLSISVLVEQNGKRERGSAGAGGRFGLEWFLAPHYTGDSRAVYLAKEAVRQAVVNLG 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M +VLG GWPGILLHEA+GHGLEGDFNRK SS F+N IG+ + S TIVD+
Sbjct: 240 AVAAPAGSMPIVLGAGWPGILLHEAVGHGLEGDFNRKESSMFTNRIGELVTSPLCTIVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ N RGSI +DDEG P+Q LIENGILKGYMQD +NA LM ++ TGN RRES+AH+P
Sbjct: 300 GTVPNMRGSITVDDEGVPSQRNVLIENGILKGYMQDKLNAHLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYM G +E+I SV+ GLYA +FSGGQVDIT+GKFVFS S+AY+I+ GKIT
Sbjct: 360 MPRMTNTYMTEGNHEFDEMIESVEFGLYAPHFSGGQVDITSGKFVFSTSEAYLIEKGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PV GATLIG G +++VSM+G M+LD G+G CGK+GQ VPVGVGQPT+K+D ITVGG
Sbjct: 420 KPVTGATLIGSGIEAMQQVSMVGKKMELDLGIGTCGKEGQSVPVGVGQPTVKLDKITVGG 479
>gi|197287441|ref|YP_002153313.1| protease TldD [Proteus mirabilis HI4320]
gi|227358297|ref|ZP_03842638.1| U62 family microcin-processing peptidase 2 [Proteus mirabilis ATCC
29906]
gi|425069288|ref|ZP_18472403.1| protein tldD [Proteus mirabilis WGLW6]
gi|425073831|ref|ZP_18476937.1| protein tldD [Proteus mirabilis WGLW4]
gi|194684928|emb|CAR47106.1| putative modulator of DNA gyrase [Proteus mirabilis HI4320]
gi|227161633|gb|EEI46670.1| U62 family microcin-processing peptidase 2 [Proteus mirabilis ATCC
29906]
gi|404595102|gb|EKA95657.1| protein tldD [Proteus mirabilis WGLW4]
gi|404597699|gb|EKA98194.1| protein tldD [Proteus mirabilis WGLW6]
Length = 481
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 261/481 (54%), Positives = 344/481 (71%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L + LLE +L L L + + ++DY D YFQ + +E WIL++ I+K G+++I
Sbjct: 3 LAVVSESLLEANNLSLDDLASTLEQLAQRQIDYGDLYFQSSYHEAWILDDQIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIAN-QSNGKIKIIKNIKKIKINSL 380
+QGVGVRAI G+KT F Y+D ++ N L + + RSI Q NG+I + I+ L
Sbjct: 63 DQGVGVRAIYGEKTGFAYADQLTLNALNQSAHAARSIVQAQGNGQIHTLGAIQH---TPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ D + S++ EKI LL V+++AR +D RV +V A+L+G Y+ +L+ DG + AD+
Sbjct: 120 YNLNDPLQSLSREEKIALLHDVDRVARAEDKRVKQVNASLTGVYEHVLVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE +G+RE G+SG GGR+ Y+YF + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEDDGKRERGSSGGGGRFGYDYFLTKENGETHAATYAREAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+ +S FS IG ++ S+ TIVD+
Sbjct: 240 AIAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRQTSVFSGRIGDKVTSELCTIVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
G++ RRGS+ IDDEG P Q LIENGILKGYMQD MNARLM + TGN RRES+AH+P
Sbjct: 300 GSIEGRRGSVAIDDEGVPGQYNVLIENGILKGYMQDKMNARLMGVKPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK PEEII+SV G+YA NF GGQVDIT+GKFVFS S+AY+I+ GKIT
Sbjct: 360 MPRMTNTYMLAGKSSPEEIIASVDRGIYAPNFGGGQVDITSGKFVFSTSEAYLIEKGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
P+KGATLIG G +++VSM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK+D +TVGG
Sbjct: 420 KPIKGATLIGSGIEAMQQVSMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLDKLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|15599670|ref|NP_253164.1| hypothetical protein PA4474 [Pseudomonas aeruginosa PAO1]
gi|218893565|ref|YP_002442434.1| putative tldD protein [Pseudomonas aeruginosa LESB58]
gi|254238865|ref|ZP_04932188.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|254244712|ref|ZP_04938034.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|296391184|ref|ZP_06880659.1| putative tldD protein [Pseudomonas aeruginosa PAb1]
gi|355650226|ref|ZP_09055965.1| tldD [Pseudomonas sp. 2_1_26]
gi|386060626|ref|YP_005977148.1| putative tldD protein [Pseudomonas aeruginosa M18]
gi|392986038|ref|YP_006484625.1| tldD protein [Pseudomonas aeruginosa DK2]
gi|416855080|ref|ZP_11911325.1| putative tldD protein [Pseudomonas aeruginosa 138244]
gi|416857054|ref|ZP_11912493.1| putative tldD protein [Pseudomonas aeruginosa 138244]
gi|416876032|ref|ZP_11919008.1| putative tldD protein [Pseudomonas aeruginosa 152504]
gi|418583887|ref|ZP_13147953.1| putative tldD protein [Pseudomonas aeruginosa MPAO1/P1]
gi|418589739|ref|ZP_13153660.1| putative tldD protein [Pseudomonas aeruginosa MPAO1/P2]
gi|419752018|ref|ZP_14278427.1| putative tldD protein [Pseudomonas aeruginosa PADK2_CF510]
gi|420141619|ref|ZP_14649292.1| hypothetical protein PACIG1_4801 [Pseudomonas aeruginosa CIG1]
gi|421155838|ref|ZP_15615304.1| hypothetical protein PABE171_4665 [Pseudomonas aeruginosa ATCC
14886]
gi|421162823|ref|ZP_15621628.1| hypothetical protein PABE173_5162 [Pseudomonas aeruginosa ATCC
25324]
gi|421182533|ref|ZP_15640008.1| hypothetical protein PAE2_4483 [Pseudomonas aeruginosa E2]
gi|421519027|ref|ZP_15965700.1| putative tldD protein [Pseudomonas aeruginosa PAO579]
gi|424944760|ref|ZP_18360523.1| putative tldD protein [Pseudomonas aeruginosa NCMG1179]
gi|451986193|ref|ZP_21934382.1| TldD protein, part of proposed TldE/TldD proteolytic complex (PMID
12029038) [Pseudomonas aeruginosa 18A]
gi|9950711|gb|AAG07862.1|AE004861_3 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|126170796|gb|EAZ56307.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|126198090|gb|EAZ62153.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|218773793|emb|CAW29607.1| putative tldD protein [Pseudomonas aeruginosa LESB58]
gi|334841130|gb|EGM19767.1| putative tldD protein [Pseudomonas aeruginosa 138244]
gi|334841310|gb|EGM19942.1| putative tldD protein [Pseudomonas aeruginosa 152504]
gi|334843363|gb|EGM21954.1| putative tldD protein [Pseudomonas aeruginosa 138244]
gi|346061206|dbj|GAA21089.1| putative tldD protein [Pseudomonas aeruginosa NCMG1179]
gi|347306932|gb|AEO77046.1| putative tldD protein [Pseudomonas aeruginosa M18]
gi|354826896|gb|EHF11098.1| tldD [Pseudomonas sp. 2_1_26]
gi|375046366|gb|EHS38927.1| putative tldD protein [Pseudomonas aeruginosa MPAO1/P1]
gi|375051595|gb|EHS44062.1| putative tldD protein [Pseudomonas aeruginosa MPAO1/P2]
gi|384401595|gb|EIE47949.1| putative tldD protein [Pseudomonas aeruginosa PADK2_CF510]
gi|392321543|gb|AFM66923.1| putative tldD protein [Pseudomonas aeruginosa DK2]
gi|403245647|gb|EJY59430.1| hypothetical protein PACIG1_4801 [Pseudomonas aeruginosa CIG1]
gi|404346432|gb|EJZ72782.1| putative tldD protein [Pseudomonas aeruginosa PAO579]
gi|404520015|gb|EKA30724.1| hypothetical protein PABE171_4665 [Pseudomonas aeruginosa ATCC
14886]
gi|404533208|gb|EKA43044.1| hypothetical protein PABE173_5162 [Pseudomonas aeruginosa ATCC
25324]
gi|404541850|gb|EKA51195.1| hypothetical protein PAE2_4483 [Pseudomonas aeruginosa E2]
gi|451756089|emb|CCQ86905.1| TldD protein, part of proposed TldE/TldD proteolytic complex (PMID
12029038) [Pseudomonas aeruginosa 18A]
gi|453046188|gb|EME93905.1| tldD protein [Pseudomonas aeruginosa PA21_ST175]
Length = 480
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 260/472 (55%), Positives = 347/472 (73%), Gaps = 7/472 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L+ L IL + +D AD YFQ +E+W+LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGLELDSLPGILHELNGPGIDAADLYFQSQVSESWMLEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
A SG+KT F YS+ I+ L A + RSI+ NG ++ K + + LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAITAEALKQAAVAARSISRAGQNGSVQAFKAVVPAR---LYAGENPL 128
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
++ EK++LL++++ R DPR+ +V +++G ++ IL+ +DG + ADIRPLV+
Sbjct: 129 DVLSRAEKVELLKQIDAATRALDPRIQQVTVSMAGVWEQILVAASDGSLAADIRPLVRFN 188
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF--TDMILEKCVSNSVNSALINLEAKPAPAGIMK 505
V++IVE+NGRRE G G GGR +Y YF D + ++ AL+NLEA PAPAG +
Sbjct: 189 VSVIVEQNGRRERGGHGGGGRTDYRYFLQEDRAM-GYAREALRQALVNLEAIPAPAGTLP 247
Query: 506 VVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSI 565
VV+G GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+++AS TIVD+GTLA RRGS+
Sbjct: 248 VVMGAGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRVGEKVASSLCTIVDDGTLAGRRGSL 307
Query: 566 NIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYML 625
++DDEG P+ C LIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML
Sbjct: 308 SVDDEGTPSNCNVLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYML 367
Query: 626 NGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIG 685
G+ P+EII+SV+ G+Y N GGQVDIT+GKFVFS S+AY+I+NG+IT PVKGATLIG
Sbjct: 368 AGESDPQEIIASVEKGIYCANLGGGQVDITSGKFVFSTSEAYLIENGRITTPVKGATLIG 427
Query: 686 HGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
+GP + +VSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 428 NGPEAMSRVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|424866517|ref|ZP_18290352.1| Putative peptidase U62, modulator of DNA gyrase [Leptospirillum sp.
Group II 'C75']
gi|124515091|gb|EAY56602.1| putative peptidase U62, modulator of DNA gyrase [Leptospirillum
rubarum]
gi|387222819|gb|EIJ77221.1| Putative peptidase U62, modulator of DNA gyrase [Leptospirillum sp.
Group II 'C75']
Length = 485
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 244/467 (52%), Positives = 335/467 (71%), Gaps = 5/467 (1%)
Query: 273 FDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISG 332
F E++L + LG+ ++D AD YF++T E+ LEEG+VK G ++QGVG R ++G
Sbjct: 20 FGTHERVLGQTLGSALGQQIDDADLYFEYTTAESLSLEEGMVKKGGRHVSQGVGARVLAG 79
Query: 333 DKTAFFYSDDISKNTLINAVKSTRSIA---NQSNGKIKIIKNIKKIKINSLYSFTDTISS 389
+KT + +++I TL V++ R+I+ + S ++++ + ++ SLY +
Sbjct: 80 EKTGYAITEEIRPETLQEIVRTARAISLTGSHSENALRLVPSRRQSA--SLYPVSSGELD 137
Query: 390 INIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVT 449
+ + K LL + AR DPRV++V+A++S E +++ R DGLI AD PL+++ VT
Sbjct: 138 VPLALKKDLLLEADSAARAADPRVVQVMASVSTEMKSVMVVRRDGLISADRLPLIRVNVT 197
Query: 450 IIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLG 509
+I E+NG+R+ G+ G GGR ++ L + A++NL A+P P G M VVLG
Sbjct: 198 VIAEENGQRQTGSYGYGGRISFAEVMGEPLRHAAREAARQAIVNLGARPCPTGTMPVVLG 257
Query: 510 PGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDD 569
PGWPGILLHEAIGHGLEGDFNRKG+SAFS IG+R+AS TI+D+GTL +RRGS+N+DD
Sbjct: 258 PGWPGILLHEAIGHGLEGDFNRKGTSAFSGRIGERVASPLCTIIDDGTLPHRRGSLNVDD 317
Query: 570 EGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKF 629
EG PTQ T LIE GILKGY+QD NARLM +S TGN RRES+AH P+PRMTNT ML+G+
Sbjct: 318 EGTPTQRTVLIEKGILKGYLQDRHNARLMGVSPTGNGRRESYAHPPMPRMTNTIMLSGES 377
Query: 630 HPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPN 689
PEEI+ S+ GLYA NF GGQVDIT+GKFVFS ++AY ++NG+I YPV+GATLIG+GP+
Sbjct: 378 DPEEILRSLDKGLYAVNFGGGQVDITSGKFVFSTAEAYWVENGRIQYPVRGATLIGNGPD 437
Query: 690 ILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
L +VSM+GND++LDPGVG CGKDGQ VPVGVG PT++++ +TVGGT
Sbjct: 438 ALTRVSMVGNDLRLDPGVGTCGKDGQSVPVGVGLPTIRVEDLTVGGT 484
>gi|407366434|ref|ZP_11112966.1| putative modulation of DNA gyrase-like protein [Pseudomonas
mandelii JR-1]
Length = 480
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 261/470 (55%), Positives = 343/470 (72%), Gaps = 3/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P + + L +LG++ +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGVTIESLQGVLGDLAGPGIDAADLYFQGQISESWALEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ L + + + G+ ++ + LY + +
Sbjct: 72 AQSGEKTGFAYSNAITLEAL--GAAARAARSISRAGQNGTVQAFTSADVTQLYGPDNPLE 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ EK++LL+R++ R DPR+ +V +++G ++ IL+ DG + AD+RPLV+ V
Sbjct: 130 VMSRAEKVELLKRIDVATRALDPRIQQVTVSMAGVWERILVASTDGSLAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
++IVE+NGRRE G G GGR +Y YF +D ++ AL+NLEA PAPAG + VV
Sbjct: 190 SVIVEQNGRRERGGHGGGGRTDYRYFLSDDRAMGYAREALRQALVNLEAIPAPAGTLPVV 249
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+GTLA RRGS+++
Sbjct: 250 LGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGTLAGRRGSLSV 309
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML G
Sbjct: 310 DDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYMLAG 369
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ PEEII SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+G
Sbjct: 370 ESDPEEIIKSVKRGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGNG 429
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
P + KVSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 430 PEAMSKVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|416018532|ref|ZP_11565460.1| TldD protein [Pseudomonas syringae pv. glycinea str. B076]
gi|416025208|ref|ZP_11568989.1| TldD protein [Pseudomonas syringae pv. glycinea str. race 4]
gi|320322504|gb|EFW78597.1| TldD protein [Pseudomonas syringae pv. glycinea str. B076]
gi|320330027|gb|EFW86014.1| TldD protein [Pseudomonas syringae pv. glycinea str. race 4]
Length = 479
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 264/471 (56%), Positives = 350/471 (74%), Gaps = 5/471 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L L +LG + +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 11 LLAPGGLSLDSLQSVLGELAGPGIDAADLYFQGMISESWSLEDGIVKEGSFNLDQGVGVR 70
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
A SG+KT F YS+ I+++ L A ++ RSI+ NG+++ + + LY+ + +
Sbjct: 71 AQSGEKTGFAYSNAITEDALRTAARAARSISRAGHNGRVQAFTSQD---VAQLYAPDNPL 127
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
++ EK++LL+R++ R D R+ +V +++G ++ IL+ DG + AD+RPLV+
Sbjct: 128 EVLSRAEKVELLKRIDVATRALDSRIQQVSVSMAGVWERILVAAADGSLAADVRPLVRFN 187
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKV 506
V++IVE+NGRRE G G GGR +Y YF TD ++ AL+NLEA PAPAG + V
Sbjct: 188 VSVIVEQNGRRERGGHGGGGRTDYRYFLTDDRAMGYAREALRQALVNLEAIPAPAGTLPV 247
Query: 507 VLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSIN 566
VLG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+GTLA RRGS++
Sbjct: 248 VLGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGTLAGRRGSLS 307
Query: 567 IDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLN 626
+DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML
Sbjct: 308 VDDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYMLG 367
Query: 627 GKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGH 686
G+ P+EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+
Sbjct: 368 GQSDPQEIIASVKRGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGN 427
Query: 687 GPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
GP + +VSM+GND+ LD GVG CGKDGQ +PVGVGQPTLKID+ITVGGT
Sbjct: 428 GPEAMSRVSMVGNDLSLDSGVGTCGKDGQSLPVGVGQPTLKIDAITVGGTG 478
>gi|289646985|ref|ZP_06478328.1| TldD protein [Pseudomonas syringae pv. aesculi str. 2250]
gi|422596784|ref|ZP_16671063.1| TldD protein [Pseudomonas syringae pv. lachrymans str. M301315]
gi|298157104|gb|EFH98193.1| TldD protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
gi|330987080|gb|EGH85183.1| TldD protein [Pseudomonas syringae pv. lachrymans str. M301315]
Length = 479
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 264/471 (56%), Positives = 350/471 (74%), Gaps = 5/471 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L L +LG + +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 11 LLAPGGLSLDSLQSVLGELAGPGIDAADLYFQGMISESWSLEDGIVKEGSFNLDQGVGVR 70
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
A SG+KT F YS+ I+++ L A ++ RSI+ NG+++ + + LY+ + +
Sbjct: 71 AQSGEKTGFAYSNAITEDALRTAARAARSISRAGQNGRVQAFTSQD---VAQLYAPDNPL 127
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
++ EK++LL+R++ R D R+ +V +++G ++ IL+ DG + AD+RPLV+
Sbjct: 128 EVLSRAEKVELLKRIDVATRALDSRIQQVSVSMAGVWERILVAAADGSLAADVRPLVRFN 187
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKV 506
V++IVE+NGRRE G G GGR +Y YF TD ++ AL+NLEA PAPAG + V
Sbjct: 188 VSVIVEQNGRRERGGHGGGGRTDYRYFLTDDRAMGYAREALRQALVNLEAIPAPAGTLPV 247
Query: 507 VLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSIN 566
VLG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+GTLA RRGS++
Sbjct: 248 VLGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGTLAGRRGSLS 307
Query: 567 IDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLN 626
+DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML
Sbjct: 308 VDDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYMLG 367
Query: 627 GKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGH 686
G+ P+EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+
Sbjct: 368 GQSDPQEIIASVKRGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGN 427
Query: 687 GPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
GP + +VSM+GND+ LD GVG CGKDGQ +PVGVGQPTLKID+ITVGGT
Sbjct: 428 GPEAMSRVSMVGNDLSLDSGVGTCGKDGQSLPVGVGQPTLKIDAITVGGTG 478
>gi|392375898|ref|YP_003207731.1| peptidase TldD [Candidatus Methylomirabilis oxyfera]
gi|258593591|emb|CBE69932.1| putative peptidase TldD [Candidatus Methylomirabilis oxyfera]
Length = 490
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 252/480 (52%), Positives = 339/480 (70%), Gaps = 2/480 (0%)
Query: 258 NIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTG 317
IHP+ R LE F L E+ L + LG +++D AD YF++ +E+ LEEGI+K
Sbjct: 2 TIHPIKPER-FFLEKFGLTERHLEQGLGAALGSQIDDADLYFEYRVSESLALEEGIIKQA 60
Query: 318 NFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKI 377
INQGVGVRA++ +KT + +SD+IS L A + IA +++ +
Sbjct: 61 TKHINQGVGVRALAHEKTGYAFSDEISVENLKLAGSRAKGIAERADAGTPPPVKVGSAPS 120
Query: 378 NSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIV 437
+ LY I + +KI LL R++ I R +DPR+++V+A+ + E ++LI + G++V
Sbjct: 121 HDLYPIRVQPVEIPLEKKIDLLHRIDAIVRKEDPRIVQVMASFACESKIVLIATSAGVMV 180
Query: 438 ADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDM-ILEKCVSNSVNSALINLEA 496
DI+PL +L +T I + R++G+ G GGR + +F + E+ + A++NL A
Sbjct: 181 GDIQPLSRLSITCIAQDGENRQVGSWGGGGRAEFEFFLEGGRFERYAKEAARLAIMNLSA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG+M VVLG GWPGILLHEAIGHGLEGDFNRK +SAFS+ IG+R+AS+ +T+VD+G
Sbjct: 241 ADAPAGMMDVVLGSGWPGILLHEAIGHGLEGDFNRKKTSAFSDRIGQRVASELVTVVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ RRGS+N+DDEG PT T LIE GIL+GY+QD +NARLM M TGN RRES+AH P+
Sbjct: 301 TIPGRRGSLNVDDEGTPTGRTVLIEQGILRGYLQDRLNARLMGMEPTGNGRRESYAHQPL 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNT+ML G P+EII SVK+GLYA F GGQVDIT+GKFVFSAS+AY+I++GKIT
Sbjct: 361 PRMTNTFMLPGDSTPDEIIGSVKHGLYAVTFGGGQVDITSGKFVFSASEAYLIEDGKITR 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIGHGP +L +V+M+GND+KLD G+G CGKDGQ VPVGVG PT+KI+ +TVGGT
Sbjct: 421 PVKGATLIGHGPEVLTRVTMVGNDLKLDEGIGTCGKDGQSVPVGVGLPTIKIEGLTVGGT 480
>gi|389683347|ref|ZP_10174679.1| TldD protein [Pseudomonas chlororaphis O6]
gi|399009385|ref|ZP_10711822.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM17]
gi|425897548|ref|ZP_18874139.1| TldD protein [Pseudomonas chlororaphis subsp. aureofaciens 30-84]
gi|388552860|gb|EIM16121.1| TldD protein [Pseudomonas chlororaphis O6]
gi|397891289|gb|EJL07767.1| TldD protein [Pseudomonas chlororaphis subsp. aureofaciens 30-84]
gi|398112607|gb|EJM02466.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM17]
Length = 480
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 265/470 (56%), Positives = 348/470 (74%), Gaps = 3/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P + + L +LG++ +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGVTLESLQGVLGDLAGPGIDAADLYFQGQISESWSLEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ L A ++ RSI+ G+ ++ + LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAITLEALGLAARAARSISRA--GQNGTVQAFTTQDVAQLYAPDNPLE 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
I+ EK++LL+RV+ R DPR+ +V +++G ++ IL+ DG + AD+RPLV+ V
Sbjct: 130 VISRAEKVELLKRVDAATRALDPRIQQVSVSMAGVWERILVASTDGGLAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
++IVE+NGRRE G G GGR +Y YF ++ ++ AL+NLEA PAPAG + VV
Sbjct: 190 SVIVEQNGRRERGGHGGGGRTDYRYFLSEDRAMGYAREALRQALVNLEAIPAPAGTLPVV 249
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+GTLA RRGS++I
Sbjct: 250 LGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGTLAGRRGSLSI 309
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML G
Sbjct: 310 DDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYMLGG 369
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ P EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+G
Sbjct: 370 ESDPAEIIASVKKGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGNG 429
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
P + +VSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 430 PEAMSRVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|410479674|ref|YP_006767311.1| C69 family peptidase [Leptospirillum ferriphilum ML-04]
gi|406774926|gb|AFS54351.1| peptidase U62, modulator of DNA gyrase [Leptospirillum ferriphilum
ML-04]
Length = 476
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 244/467 (52%), Positives = 335/467 (71%), Gaps = 5/467 (1%)
Query: 273 FDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISG 332
F E++L + LG+ ++D AD YF++T E+ LEEG+VK G ++QGVG R ++G
Sbjct: 11 FGTHERVLGQTLGSALGQQIDDADLYFEYTTAESLSLEEGMVKKGGRHVSQGVGARVLAG 70
Query: 333 DKTAFFYSDDISKNTLINAVKSTRSIA---NQSNGKIKIIKNIKKIKINSLYSFTDTISS 389
+KT + +++I TL V++ R+I+ + S ++++ + ++ SLY +
Sbjct: 71 EKTGYAITEEIRPETLQEIVRTARAISLTGSHSENALRLVPSRRQSA--SLYPVSSGELD 128
Query: 390 INIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVT 449
+ + K LL + AR DPRV++V+A++S E +++ R DGLI AD PL+++ VT
Sbjct: 129 VPLALKKDLLLEADSAARAADPRVVQVMASVSTEMKSVMVVRRDGLISADRLPLIRVNVT 188
Query: 450 IIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLG 509
+I E+NG+R+ G+ G GGR ++ L + A++NL A+P P G M VVLG
Sbjct: 189 VIAEENGQRQTGSYGYGGRISFAEVMGEPLRHAAREAARQAIVNLGARPCPTGTMPVVLG 248
Query: 510 PGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDD 569
PGWPGILLHEAIGHGLEGDFNRKG+SAFS IG+R+AS TI+D+GTL +RRGS+N+DD
Sbjct: 249 PGWPGILLHEAIGHGLEGDFNRKGTSAFSGRIGERVASPLCTIIDDGTLPHRRGSLNVDD 308
Query: 570 EGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKF 629
EG PTQ T LIE GILKGY+QD NARLM +S TGN RRES+AH P+PRMTNT ML+G+
Sbjct: 309 EGTPTQRTVLIEKGILKGYLQDRHNARLMGVSPTGNGRRESYAHPPMPRMTNTIMLSGES 368
Query: 630 HPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPN 689
PEEI+ S+ GLYA NF GGQVDIT+GKFVFS ++AY ++NG+I YPV+GATLIG+GP+
Sbjct: 369 DPEEILRSLDKGLYAVNFGGGQVDITSGKFVFSTAEAYWVENGRIQYPVRGATLIGNGPD 428
Query: 690 ILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
L +VSM+GND++LDPGVG CGKDGQ VPVGVG PT++++ +TVGGT
Sbjct: 429 ALTRVSMVGNDLRLDPGVGTCGKDGQSVPVGVGLPTIRVEDLTVGGT 475
>gi|375132111|ref|YP_004994211.1| tldD protein [Vibrio furnissii NCTC 11218]
gi|315181285|gb|ADT88199.1| tldD protein [Vibrio furnissii NCTC 11218]
Length = 481
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 253/475 (53%), Positives = 342/475 (72%), Gaps = 9/475 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L E+ + L + ++DYAD YFQ + +E+ +LE+ I+K G+F+I+ GVGVR
Sbjct: 10 LLTPAGLTEQDIADTLATIATREIDYADIYFQSSWHESLVLEDSIIKDGSFNIDCGVGVR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSLYSFTDTI 387
A++G+KT F YSD I + L + + R IA Q NG+++ K S Y+ + +
Sbjct: 70 AVTGEKTGFAYSDQIQLDGLKQSAIAARGIAQQGQNGRVQAFKRSDN---QSYYAADNPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S ++K +LL +++ R K+P + +V +LSG ++ +L+ DG DIRPLV+L
Sbjct: 127 QSWEKQKKTELLMQLDAYIRTKEPLIQEVSVSLSGVHEQMLVAATDGTYAGDIRPLVRLS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCV----SNSVNSALINLEAKPAPAG 502
++++ +K RRE G++G GGR+NY+YF T+ +K ++ AL+NLEA APAG
Sbjct: 187 ISVLAQKGDRRERGSAGGGGRFNYDYFLTEEHGQKMAFAYADEAIRQALVNLEADAAPAG 246
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS FS +GK++ S TIVD+GTL + R
Sbjct: 247 TMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSVFSGKMGKQVTSDLCTIVDDGTLKDLR 306
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+N+DDEG Q LIE G+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNT
Sbjct: 307 GSLNVDDEGVNGQYNVLIEKGVLKGYMQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNT 366
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML G+ PEEIIS+VK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NGK+T P+KGAT
Sbjct: 367 YMLPGQHTPEEIISTVKKGVYAPNFGGGQVDITSGKFVFSASEAYLIENGKVTRPIKGAT 426
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
LIG G +++VSM+GND+ +D GVGVCGK GQ VPVGVGQPTLK+D++TVGGT
Sbjct: 427 LIGSGIEAMQQVSMVGNDLSIDRGVGVCGKAGQSVPVGVGQPTLKLDALTVGGTE 481
>gi|426407683|ref|YP_007027782.1| peptidase U62 modulator of DNA gyrase [Pseudomonas sp. UW4]
gi|426265900|gb|AFY17977.1| peptidase U62 modulator of DNA gyrase [Pseudomonas sp. UW4]
Length = 480
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 260/472 (55%), Positives = 345/472 (73%), Gaps = 7/472 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P + + L +LG++ +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGVTIESLQGVLGDLAGPGIDAADLYFQGQISESWALEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ L + + + G+ ++ + LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAITLEAL--GAAARAARSISRAGQHGTVQAFTSQDVAQLYAPDNPLE 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
+ EK+ LL+RV+ R DPR+ +V +++G ++ IL+ DG + AD+RPLV+ V
Sbjct: 130 VLTRAEKVDLLKRVDAATRALDPRIQQVTVSMAGVWERILVASTDGGLAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVS---NSVNSALINLEAKPAPAGIMK 505
++IVE+NGRRE G G GGR +Y YF + ++ + ++ AL+NLEA PAPAG +
Sbjct: 190 SVIVEQNGRRERGGHGGGGRTDYRYF--LAEDRAMGYAREALRQALVNLEAIPAPAGTLP 247
Query: 506 VVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSI 565
VVLG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+GTLA RRGS+
Sbjct: 248 VVLGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGTLAGRRGSL 307
Query: 566 NIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYML 625
++DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML
Sbjct: 308 SVDDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYML 367
Query: 626 NGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIG 685
G+ P+EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG
Sbjct: 368 AGESDPQEIIASVKRGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIG 427
Query: 686 HGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
+GP + KVSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 428 NGPEAMSKVSMVGNDLSLDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|307257611|ref|ZP_07539371.1| hypothetical protein appser10_15990 [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306863914|gb|EFM95837.1| hypothetical protein appser10_15990 [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
Length = 486
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 255/485 (52%), Positives = 340/485 (70%), Gaps = 13/485 (2%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN LL P L+ L K+L + ++DYAD YFQ +++E+W LE+ I+K G F I
Sbjct: 2 LNQVSESLLAPSGLELSHLSKVLNHFANRQIDYADLYFQLSQDESWSLEDSIIKEGGFYI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++G GVRA+SG+KT F Y+D I + L + RSI N S G++ + K+ K+ Y
Sbjct: 62 DRGFGVRAVSGEKTGFAYADQIGLSQLEQCATAARSITNAS-GQLSV-KSFKQTNAIKRY 119
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + +++ +K++LL V+K+AR +DPRVI+V A LS Y+ +L+ DG + ADIR
Sbjct: 120 ASVNPLDTLSREQKVELLHLVDKVARAEDPRVIQVNAGLSAVYEEMLVAATDGTLAADIR 179
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----------TDMILEKCVSNSVNSA 490
PLV+L V+++VE+N +RE G++G GGR+ N+F D +V A
Sbjct: 180 PLVRLSVSVLVEENSKRERGSAGAGGRFGLNWFFEPQVVNGEMTGDTRAVYLAKEAVRMA 239
Query: 491 LINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEI 550
L+NL A PAPAG M +VLG GWPGILLHEA+GHGLEGDFNRK SS F+ IG+ + S
Sbjct: 240 LVNLGAMPAPAGTMPIVLGAGWPGILLHEAVGHGLEGDFNRKESSLFTGKIGELVTSPLC 299
Query: 551 TIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRES 610
TIVD+GT+ N RGSI +DDEG P+Q LIENGILKGYMQD +NARLM + TGN RRES
Sbjct: 300 TIVDDGTVPNVRGSITVDDEGVPSQRNVLIENGILKGYMQDKLNARLMGVVPTGNGRRES 359
Query: 611 FAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIK 670
+AH+P+PRMTNTY+ G EE+I SV G+YA +FSGGQVDIT+GKFVFS ++AY+I+
Sbjct: 360 YAHLPMPRMTNTYLTEGNHEFEEMIESVDYGIYAPHFSGGQVDITSGKFVFSTAEAYLIE 419
Query: 671 NGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS 730
GKIT PV GATLIG G + +++VSM+G M+LDPG+G CGK+GQ VPVGVGQPT+K+D
Sbjct: 420 KGKITKPVTGATLIGSGIDAMQQVSMVGKKMELDPGIGTCGKEGQSVPVGVGQPTVKLDK 479
Query: 731 ITVGG 735
ITVGG
Sbjct: 480 ITVGG 484
>gi|70728285|ref|YP_258034.1| TldD protein [Pseudomonas protegens Pf-5]
gi|68342584|gb|AAY90190.1| TldD protein [Pseudomonas protegens Pf-5]
Length = 480
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 264/470 (56%), Positives = 348/470 (74%), Gaps = 3/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P + + L +LG++ +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGVTIESLQGVLGDLAGPGIDAADLYFQGQISESWSLEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ L A ++ RSI+ G+ ++ + LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAITLEALGLAARAARSISRA--GQNGTVQAFSTQDVAQLYAPDNPLE 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
I+ EK++LL+RV+ R DPR+ +V +++G ++ IL+ DG + AD+RPLV+ V
Sbjct: 130 VISRAEKVELLKRVDAATRALDPRIQQVSVSMAGVWERILVASTDGGLAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
++IVE+NGRRE G G GGR +Y YF ++ ++ AL+NLEA PAPAG + VV
Sbjct: 190 SVIVEQNGRRERGGHGGGGRTDYRYFLSEDRAMGYAREALRQALVNLEAIPAPAGTLPVV 249
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+GTLA RRGS+++
Sbjct: 250 LGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGTLAGRRGSLSV 309
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML G
Sbjct: 310 DDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYMLGG 369
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ P EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+G
Sbjct: 370 ESDPAEIIASVKKGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGNG 429
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
P + +VSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 430 PEAMSRVSMVGNDLSLDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|213966623|ref|ZP_03394774.1| tldD protein [Pseudomonas syringae pv. tomato T1]
gi|301383133|ref|ZP_07231551.1| tldD protein [Pseudomonas syringae pv. tomato Max13]
gi|302063721|ref|ZP_07255262.1| tldD protein [Pseudomonas syringae pv. tomato K40]
gi|302133805|ref|ZP_07259795.1| tldD protein [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|422590206|ref|ZP_16664863.1| tldD protein [Pseudomonas syringae pv. morsprunorum str. M302280]
gi|213928473|gb|EEB62017.1| tldD protein [Pseudomonas syringae pv. tomato T1]
gi|330877203|gb|EGH11352.1| tldD protein [Pseudomonas syringae pv. morsprunorum str. M302280]
Length = 479
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 264/471 (56%), Positives = 350/471 (74%), Gaps = 5/471 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L L +LG + +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 11 LLAPGGLTLDSLQSVLGELAGPGIDAADLYFQGMISESWSLEDGIVKEGSFNLDQGVGVR 70
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
A SG+KT F YS+ I+++ L A ++ RSI+ NG+++ + + LY+ + +
Sbjct: 71 AQSGEKTGFAYSNAITEDALRTAARAARSISRAGQNGRVQAFTSQD---VAQLYAPDNPL 127
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
++ EK++LL+R++ R D R+ +V +++G ++ IL+ DG + AD+RPLV+
Sbjct: 128 EVLSRAEKVELLKRIDVATRALDSRIQQVSVSMAGVWERILVAAADGSLAADVRPLVRFN 187
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKV 506
V++IVE+NGRRE G G GGR +Y YF TD ++ AL+NLEA PAPAG + V
Sbjct: 188 VSVIVEQNGRRERGGHGGGGRTDYRYFLTDDRAMGYAREALRQALVNLEAIPAPAGTLPV 247
Query: 507 VLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSIN 566
VLG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+GTLA RRGS++
Sbjct: 248 VLGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGTLAGRRGSLS 307
Query: 567 IDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLN 626
+DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML
Sbjct: 308 VDDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYMLA 367
Query: 627 GKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGH 686
G+ P+EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+
Sbjct: 368 GQSDPQEIIASVKRGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGN 427
Query: 687 GPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
GP + +VSM+GND+ LD GVG CGKDGQ +PVGVGQPTLKID+ITVGGT
Sbjct: 428 GPEAMSRVSMVGNDLSLDSGVGTCGKDGQSLPVGVGQPTLKIDAITVGGTG 478
>gi|50119233|ref|YP_048400.1| protease TldD [Pectobacterium atrosepticum SCRI1043]
gi|49609759|emb|CAG73193.1| putative modulator of DNA gyrase [Pectobacterium atrosepticum
SCRI1043]
Length = 481
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 256/470 (54%), Positives = 349/470 (74%), Gaps = 11/470 (2%)
Query: 273 FDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISG 332
+LD+ L +LG++ + ++DYAD YFQ + +E+W+LE+ I+K G+++I+QGVG+RAI G
Sbjct: 16 LNLDD--LAAVLGSLNERRLDYADLYFQSSYHESWVLEDRIIKDGSYNIDQGVGIRAIDG 73
Query: 333 DKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSLYSFTDTISSIN 391
+KT F Y+D I+ N L + ++ RSI Q GK + + + +LY + + S+
Sbjct: 74 EKTGFAYADQITLNALHQSAQAARSIVREQGTGKARTLGAVSH---RALYPTLNPLDSLT 130
Query: 392 IREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTII 451
+KI LL+R + +AR D RV +V A+L+G Y+++L+ DG + AD+RPLV+L ++++
Sbjct: 131 REDKIALLQRADTVARAADTRVQEVSASLTGVYELVLVAATDGTLAADVRPLVRLSISVL 190
Query: 452 VEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLEAKPAPAGIMKV 506
VE+ G+RE G SG G R Y YF ++ ++ +V AL+NL A APAG M V
Sbjct: 191 VEEEGKRERGGSGGGTRGGYEYFWEVTDGEPRVDAWAKEAVRMALVNLSAVAAPAGPMPV 250
Query: 507 VLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSIN 566
VLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +GK +AS+ T+VD+GTL RRGS++
Sbjct: 251 VLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGKLVASELCTVVDDGTLTGRRGSLS 310
Query: 567 IDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLN 626
+DDEG P Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML
Sbjct: 311 MDDEGVPGQYNILIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNTYMLA 370
Query: 627 GKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGH 686
GK PEEIISSV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+ G+IT PVKGATLIG
Sbjct: 371 GKSTPEEIISSVEYGLYAPNFGGGQVDITSGKFVFSTSEAYLIEKGRITTPVKGATLIGS 430
Query: 687 GPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK++S+TVGGT
Sbjct: 431 GIEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLESLTVGGT 480
>gi|307250817|ref|ZP_07532746.1| hypothetical protein appser4_15820 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306857176|gb|EFM89303.1| hypothetical protein appser4_15820 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
Length = 486
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 254/485 (52%), Positives = 340/485 (70%), Gaps = 13/485 (2%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN LL P L+ L K+L + ++DYAD YFQ +++E+W LE+ I+K G F I
Sbjct: 2 LNQVSESLLAPSGLELSHLSKVLNHFANRQIDYADLYFQLSQDESWSLEDSIIKEGGFYI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++G GVRA+SG+KT F Y+D I + L + RSI N S G++ + K+ K+ Y
Sbjct: 62 DRGFGVRAVSGEKTGFAYADQIGLSQLEQCATAARSITNAS-GQLSV-KSFKQTNAIKRY 119
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + +++ +K++LL V+K+AR +DPRVI+V A LS Y+ +L+ DG + ADIR
Sbjct: 120 ASVNPLDTLSREQKVELLHLVDKVARAEDPRVIQVNAGLSAVYEEMLVAATDGTLAADIR 179
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----------TDMILEKCVSNSVNSA 490
PLV+L V+++VE+N +RE G++G GGR+ N+F D +V A
Sbjct: 180 PLVRLSVSVLVEENSKRECGSAGAGGRFGLNWFFEPQVVNGEMTGDTRAVYLAKEAVRMA 239
Query: 491 LINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEI 550
L+NL A PAPAG M +VLG GWPGILLHEA+GHGLEGDFNRK SS F+ IG+ + S
Sbjct: 240 LVNLSAMPAPAGTMPIVLGAGWPGILLHEAVGHGLEGDFNRKESSLFTGKIGELVTSPLC 299
Query: 551 TIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRES 610
TIVD+GT+ N RGSI +DDEG P+Q LIENGILKGYMQD +NARLM ++ TGN RRES
Sbjct: 300 TIVDDGTVPNVRGSITVDDEGVPSQRNVLIENGILKGYMQDKLNARLMGVAPTGNGRRES 359
Query: 611 FAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIK 670
+AH+P+PRMTNTY+ G EE+I SV G+YA +FSGGQVDIT+GKFVFS ++AY+I+
Sbjct: 360 YAHLPMPRMTNTYLTEGSHSFEEMIESVDYGIYAPHFSGGQVDITSGKFVFSTAEAYLIE 419
Query: 671 NGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS 730
GKIT V GATLIG G + +++VSM+G M+LDPG+G CGK+GQ VPVGVGQPT+K+D
Sbjct: 420 KGKITKQVTGATLIGSGIDAMQQVSMVGKKMELDPGIGTCGKEGQSVPVGVGQPTVKLDK 479
Query: 731 ITVGG 735
ITVGG
Sbjct: 480 ITVGG 484
>gi|421615987|ref|ZP_16057006.1| peptidase U62, modulator of DNA gyrase [Pseudomonas stutzeri KOS6]
gi|421617954|ref|ZP_16058935.1| peptidase U62, modulator of DNA gyrase [Pseudomonas stutzeri KOS6]
gi|409779949|gb|EKN59594.1| peptidase U62, modulator of DNA gyrase [Pseudomonas stutzeri KOS6]
gi|409782169|gb|EKN61736.1| peptidase U62, modulator of DNA gyrase [Pseudomonas stutzeri KOS6]
Length = 480
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 267/470 (56%), Positives = 348/470 (74%), Gaps = 3/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L L +LG + VD AD YFQ +E+W+LE+GIVK G F + QGVGVR
Sbjct: 12 LLAPGGLSIDDLPGLLGELAGPGVDAADLYFQDQVSESWVLEDGIVKEGGFHLEQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+SG+KT F YS+ I+ + L A ++ RSIA +G+ ++ + + LYS + +
Sbjct: 72 ALSGEKTGFAYSNAITADALRQAAQAARSIAR--SGQQGQVRVLSRAACVPLYSRHNPLD 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ EK++LL+R++ R DPR+ +V +L+G ++ IL+ DG + DIRPLV+ V
Sbjct: 130 GLSRAEKVELLKRIDVATRALDPRIKQVTVSLAGVWEHILVAGMDGGMATDIRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVS-NSVNSALINLEAKPAPAGIMKVV 507
++IVE+NGRRE G G GGR Y YF D + ++ AL+NLEA PAPAG + VV
Sbjct: 190 SVIVEQNGRRERGGQGGGGRTGYQYFLDEDRAMGYAREALRQALVNLEAVPAPAGSLPVV 249
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LGPGW G+LLHEA+GHGLEGDFNRKGSSA+S IG+++AS+ TIVD+GTLA+RRGS+++
Sbjct: 250 LGPGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRIGQQVASRLCTIVDDGTLADRRGSLSV 309
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG TQCTTLIENGILKGY+QD +NARLM ++ TGN RRES+AH+P+PRMTNTYML G
Sbjct: 310 DDEGTQTQCTTLIENGILKGYIQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNTYMLAG 369
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ P+EII SVK G+Y + GGQVDIT+GKFVFS S+AY+I++G+IT PVKGATLIG+G
Sbjct: 370 ESDPQEIIRSVKKGIYCASLGGGQVDITSGKFVFSTSEAYLIEDGRITAPVKGATLIGNG 429
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
P ++ +VSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID ITVGGT
Sbjct: 430 PEVMNRVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKIDEITVGGTG 479
>gi|407693314|ref|YP_006818103.1| TldD-like protein [Actinobacillus suis H91-0380]
gi|407389371|gb|AFU19864.1| TldD-like protein [Actinobacillus suis H91-0380]
Length = 486
Score = 517 bits (1331), Expect = e-143, Method: Compositional matrix adjust.
Identities = 253/485 (52%), Positives = 342/485 (70%), Gaps = 13/485 (2%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN LL P L+ L K+L + ++DYAD YFQ +++E+W LE+ I+K G F I
Sbjct: 2 LNQVSESLLAPSGLELSHLSKVLDHFANRQIDYADLYFQLSQDESWSLEDSIIKEGGFYI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++G GVRA+SG+KT F Y+D I + L + RSI N S G++ + K+ K+ Y
Sbjct: 62 DRGFGVRAVSGEKTGFAYADQIGLSQLEQCATAARSITNAS-GQLSV-KSFKQTNAIKRY 119
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + +++ +K++LL V+K+AR +DPRVI+V A LS Y+ +L+ DG + ADIR
Sbjct: 120 ASVNPLDTLSREQKVELLHLVDKVARAEDPRVIQVNAGLSAVYEEMLVAATDGTLAADIR 179
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----------TDMILEKCVSNSVNSA 490
PLV+L V+++VE+NG+RE G++G GGR+ N+F D +V A
Sbjct: 180 PLVRLSVSVLVEENGKRERGSAGAGGRFGLNWFFEPQVVNGEMTGDTRAVYLAKEAVRMA 239
Query: 491 LINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEI 550
L+NL A PAPAG M +VLG GWPGILLHEA+GHGLEGDFNRK SS F+ IG+ + S
Sbjct: 240 LVNLGAMPAPAGTMPIVLGAGWPGILLHEAVGHGLEGDFNRKESSLFTGKIGELVTSPLC 299
Query: 551 TIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRES 610
TI+D+GT+ + RGSI +DDEG P+Q LIENGILKGY+QD +NARLM ++ TGN RRES
Sbjct: 300 TIIDDGTVPDVRGSITVDDEGVPSQRNVLIENGILKGYIQDKLNARLMGVAPTGNGRRES 359
Query: 611 FAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIK 670
+AH+P+PRMTNTY+ G EE+I SV G+YA +FSGGQVDIT+GKFVFS ++AY+I+
Sbjct: 360 YAHLPMPRMTNTYLTEGSHSFEEMIESVDYGIYAPHFSGGQVDITSGKFVFSTAEAYLIE 419
Query: 671 NGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS 730
GKIT PV GATLIG G + +++VSM+G M+LDPG+G CGK+GQ VPVGVGQPT+K+D
Sbjct: 420 KGKITKPVTGATLIGSGIDAMQQVSMVGKKMELDPGIGTCGKEGQSVPVGVGQPTVKLDK 479
Query: 731 ITVGG 735
ITVGG
Sbjct: 480 ITVGG 484
>gi|398948218|ref|ZP_10672632.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM33]
gi|398160872|gb|EJM49123.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM33]
Length = 480
Score = 517 bits (1331), Expect = e-143, Method: Compositional matrix adjust.
Identities = 261/471 (55%), Positives = 343/471 (72%), Gaps = 5/471 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P + + L +LG++ +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGVTIESLQGVLGDLAGPGIDAADLYFQGQISESWALEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ L + + + G+ ++ + LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAITLEAL--GAAARAARSISRAGQHGTVQAFTSQDVAQLYAPDNPLE 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
+ EK+ LL+RV+ R DPR+ +V +++G ++ IL+ DG + AD+RPLV+ V
Sbjct: 130 VLTRAEKVDLLKRVDAATRALDPRIQQVTVSMAGVWERILVASTDGGLAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF--TDMILEKCVSNSVNSALINLEAKPAPAGIMKV 506
++IVE+NGRRE G G GGR +Y YF D + ++ AL+NLEA PAPAG + V
Sbjct: 190 SVIVEQNGRRERGGHGGGGRTDYRYFLGEDRAM-GYAREALRQALVNLEAIPAPAGTLPV 248
Query: 507 VLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSIN 566
VLG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+GTLA RRGS++
Sbjct: 249 VLGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGTLAGRRGSLS 308
Query: 567 IDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLN 626
+DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML
Sbjct: 309 VDDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYMLA 368
Query: 627 GKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGH 686
G+ P+EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+
Sbjct: 369 GESDPQEIIASVKRGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGN 428
Query: 687 GPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
GP + KVSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 429 GPEAMSKVSMVGNDLSLDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|226329350|ref|ZP_03804868.1| hypothetical protein PROPEN_03255 [Proteus penneri ATCC 35198]
gi|225202536|gb|EEG84890.1| TldD/PmbA family protein [Proteus penneri ATCC 35198]
Length = 481
Score = 517 bits (1331), Expect = e-143, Method: Compositional matrix adjust.
Identities = 262/481 (54%), Positives = 347/481 (72%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L + LLE L L L + + ++DY D YFQ + +E W+L++ I+K G+++I
Sbjct: 3 LAVVSESLLEANKLSLDDLASTLEQLAQRQIDYGDLYFQSSYHEAWVLDDQIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIAN-QSNGKIKIIKNIKKIKINSL 380
+QGVGVRAI G+KT F Y+D ++ N L + + RSI + NG+I + I+ + L
Sbjct: 63 DQGVGVRAIYGEKTGFAYADQLTLNALNQSAHAARSIVQAKGNGRIHTLGAIQH---SPL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
YS D + S++ EKI LL V+K+AR +D RV +V A+L+G Y+ +L+ DG + AD+
Sbjct: 120 YSLNDPLQSLSREEKIALLHEVDKVARAEDKRVKQVNASLTGVYEHVLVAATDGTLAADV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L V+++VE++G+RE G SG GGR+ Y+YF + +V AL+NL
Sbjct: 180 RPLVRLSVSVLVEEDGKRERGASGGGGRFGYDYFLMKADGESHAVTYAREAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+ +S FS +G+++ S+ TIVD+
Sbjct: 240 AIAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRETSVFSGRLGEKVTSELCTIVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
G++ RRGS+ IDDEG P Q LIENGILKGYMQD MNARLM ++ TGN RRES+AH+P
Sbjct: 300 GSIEGRRGSVAIDDEGVPGQYNVLIENGILKGYMQDKMNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML GK PEEII+SV G+YA NF GGQVDIT+GKFVFS S+AY+I+NGKIT
Sbjct: 360 MPRMTNTYMLAGKSSPEEIIASVDRGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
P+KGATLIG G +++VSM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK+D ITVGG
Sbjct: 420 KPIKGATLIGSGIEAMQQVSMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLDKITVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|333901869|ref|YP_004475742.1| peptidase U62 modulator of DNA gyrase [Pseudomonas fulva 12-X]
gi|333117134|gb|AEF23648.1| peptidase U62 modulator of DNA gyrase [Pseudomonas fulva 12-X]
Length = 480
Score = 517 bits (1331), Expect = e-143, Method: Compositional matrix adjust.
Identities = 263/478 (55%), Positives = 347/478 (72%), Gaps = 5/478 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L+ LL P L + L +LG + +D AD YFQ +E W+LE+GIVK G+F++
Sbjct: 5 LSTVSEQLLSPGGLTLEHLPGVLGELAGPGIDAADLYFQTQVSETWVLEDGIVKEGSFNL 64
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QGVGVRA SG+KT F YS+ I+ L + + + + G+ ++ K ++ LY
Sbjct: 65 DQGVGVRAQSGEKTGFAYSNAITPEAL--SQAARAARSIARAGQQGRVQAFKATEVMPLY 122
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + I+ +K++LL+R++ R DPR+ +V +L+G +D +L+ DG + ADIR
Sbjct: 123 AADNPLDVIDRAQKVELLKRIDIATRALDPRIKQVTVSLAGVWDRVLVAATDGSLGADIR 182
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF--TDMILEKCVSNSVNSALINLEAKPA 499
PLV+ V++IVE+NGRRE G G GGR +Y YF D + ++ AL+NLEA A
Sbjct: 183 PLVRFNVSVIVEQNGRRERGGHGGGGRTDYRYFLNEDRAM-GYAREALRQALVNLEAVAA 241
Query: 500 PAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLA 559
PAG + VV+G GW G+LLHEA+GHGLEGDFNRKGSS +S IG+++ASK TIVD+GTLA
Sbjct: 242 PAGTLPVVMGAGWSGVLLHEAVGHGLEGDFNRKGSSNYSGKIGQQVASKLCTIVDDGTLA 301
Query: 560 NRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRM 619
RRGS+++DDEG PTQCTTLIENG+LKGYMQD +NARLM ++ TGN RRES++H+P+PRM
Sbjct: 302 ERRGSLSMDDEGTPTQCTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYSHLPMPRM 361
Query: 620 TNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVK 679
TNTYML G+ PEEII SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVK
Sbjct: 362 TNTYMLAGESEPEEIIRSVKKGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVK 421
Query: 680 GATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
GATLIG+GP + +VSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 422 GATLIGNGPEAMSRVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|335043397|ref|ZP_08536424.1| putative Zn-dependent protease [Methylophaga aminisulfidivorans MP]
gi|333790011|gb|EGL55893.1| putative Zn-dependent protease [Methylophaga aminisulfidivorans MP]
Length = 480
Score = 517 bits (1331), Expect = e-143, Method: Compositional matrix adjust.
Identities = 259/469 (55%), Positives = 338/469 (72%), Gaps = 3/469 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L + L L VDYAD YFQ ++ ENW+LE+GI+K G + + QGVGVR
Sbjct: 13 LLVPVGLTDTDLENALATTMTAGVDYADLYFQQSRQENWVLEDGIIKDGGYHLEQGVGVR 72
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YSDD+ L A K+ ++I+ Q G + + K + LY+ D I
Sbjct: 73 ACSGEKTGFAYSDDLVLPALQKAAKAAQAISRQ--GSQQSVAVWTKQQSPVLYTPDDPIL 130
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ + EK+ LL + AR DPRV +V +L+G D +LI +DG DIRPLV++ V
Sbjct: 131 ALTVTEKLNLLREADAAARAADPRVKQVSVSLAGGIDTVLIAASDGTYATDIRPLVRMNV 190
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMILE-KCVSNSVNSALINLEAKPAPAGIMKVV 507
++IVE+NGRRE G++G G R +Y YF L +V AL+NLEA APAG M VV
Sbjct: 191 SVIVEQNGRRERGSAGGGRRMDYRYFQQNSLAVNYAKEAVRLALVNLEAVAAPAGTMPVV 250
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+++AS T+VD+GT+ +RRGS+N+
Sbjct: 251 LGNGWPGVLLHEAVGHGLEGDFNRRGTSTFSGKMGEQVASPLCTVVDDGTMPSRRGSLNV 310
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG TQ TTLIE G L GYMQD N+RLM + TGN RRES+AH+P+PRMTNTYML G
Sbjct: 311 DDEGVETQFTTLIEKGKLTGYMQDKHNSRLMGSTSTGNGRRESYAHLPMPRMTNTYMLPG 370
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ EEII+SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T PVKGATLIG+G
Sbjct: 371 EHKAEEIIASVEKGIYAVNFGGGQVDITSGKFVFSTSEAYLIENGKVTTPVKGATLIGNG 430
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P +++++SM+ +D++LD GVG CGK+GQ VPVGVGQPTLKID++TVGGT
Sbjct: 431 PEVMQRISMVADDLELDTGVGNCGKEGQSVPVGVGQPTLKIDALTVGGT 479
>gi|387770951|ref|ZP_10127123.1| TldD/PmbA family protein [Pasteurella bettyae CCUG 2042]
gi|386902870|gb|EIJ67691.1| TldD/PmbA family protein [Pasteurella bettyae CCUG 2042]
Length = 482
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 252/481 (52%), Positives = 342/481 (71%), Gaps = 5/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN LL P +L K L I + ++DY+D YFQ +++E+W+LE+GI+K G F I
Sbjct: 2 LNKVEQSLLVPSNLCIKDLANIFDQLSHRELDYSDIYFQLSQDESWVLEDGIIKEGGFHI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVG+RAISG+KT F YSD I+ +L + + IAN G I + + Y
Sbjct: 62 DRGVGLRAISGEKTGFAYSDQINLASLQQCANAVKGIANVQQGNIIVPTKFSSVNPPLRY 121
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + +++ +KI+LL V+K AR V +V A+LS Y+ + + DG + ADIR
Sbjct: 122 ASINPLDTLSKEKKIELLYLVDKTARTMSTYVSRVSASLSAIYEEVFVVATDGTLAADIR 181
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L ++++VEK+G+RE G++GCGGR ++F D+ +V AL+NLEA
Sbjct: 182 PLVRLSISVLVEKDGKRERGSAGCGGRLGLDWFLESVDGDIRAVHFAKEAVRQALVNLEA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRK SS FS IG+ + S TIVD+G
Sbjct: 242 VGAPAGPMPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSLFSGKIGELVTSPLCTIVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL++RRGS+ IDDEG P+QC LIENGILKGYMQD MNARLM + TGN RRES+AH+P+
Sbjct: 302 TLSDRRGSLTIDDEGTPSQCNVLIENGILKGYMQDKMNARLMGVKPTGNGRRESYAHLPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ E+II+S+ +G++A++F GGQVDIT+GKF FS ++AY+I+ GKIT
Sbjct: 362 PRMTNTYMLAGQSKFEDIIASIDHGIFASHFGGGQVDITSGKFTFSTTEAYLIEKGKITK 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G ++++VSM+ ++M++D G+GVCGK GQ VPVGVGQP LKI+ ITVGGT
Sbjct: 422 PVKGATLIGSGIEVMQQVSMVADNMEIDHGIGVCGKSGQSVPVGVGQPALKIEKITVGGT 481
Query: 737 N 737
+
Sbjct: 482 H 482
>gi|260767286|ref|ZP_05876226.1| TldD protein probably a protease [Vibrio furnissii CIP 102972]
gi|260617693|gb|EEX42872.1| TldD protein probably a protease [Vibrio furnissii CIP 102972]
Length = 481
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 253/475 (53%), Positives = 342/475 (72%), Gaps = 9/475 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L E+ + L + ++DYAD YFQ + +E+ +LE+ I+K G+F+I+ GVGVR
Sbjct: 10 LLTPAGLTEQDIADTLATIATREIDYADIYFQSSWHESLVLEDSIIKDGSFNIDCGVGVR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSLYSFTDTI 387
A++G+KT F YSD I + L + + R IA Q NG+++ K S Y+ + +
Sbjct: 70 AVTGEKTGFAYSDQIQLDGLKQSAIAARGIAQQGQNGRVQAFKRSDN---QSYYAADNPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S ++K +LL +++ R K+P + +V +LSG ++ +L+ DG DIRPLV+L
Sbjct: 127 QSWEKQKKTELLMQLDAYIRTKEPLIQEVSVSLSGVHEQMLVAATDGTYAGDIRPLVRLS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCV----SNSVNSALINLEAKPAPAG 502
++++ +K RRE G++G GGR+NY+YF T+ +K ++ AL+NLEA APAG
Sbjct: 187 ISVLAQKGDRRERGSAGGGGRFNYDYFLTEENGQKMAFAYADEAIRQALVNLEADAAPAG 246
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS FS +GK++ S TIVD+GTL + R
Sbjct: 247 TMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSVFSGKMGKQVTSDLCTIVDDGTLKDLR 306
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+N+DDEG Q LIE G+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNT
Sbjct: 307 GSLNVDDEGVNGQYNVLIEKGVLKGYMQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNT 366
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML G+ PEEIIS+VK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NGK+T P+KGAT
Sbjct: 367 YMLPGQHTPEEIISTVKKGVYAPNFGGGQVDITSGKFVFSASEAYLIENGKVTRPIKGAT 426
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
LIG G +++VSM+GND+ +D GVGVCGK GQ VPVGVGQPTLK+D++TVGGT
Sbjct: 427 LIGSGIEAMQQVSMVGNDLSIDRGVGVCGKAGQSVPVGVGQPTLKLDALTVGGTE 481
>gi|422650915|ref|ZP_16713715.1| tldD protein [Pseudomonas syringae pv. actinidiae str. M302091]
gi|330963998|gb|EGH64258.1| tldD protein [Pseudomonas syringae pv. actinidiae str. M302091]
Length = 479
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 264/471 (56%), Positives = 350/471 (74%), Gaps = 5/471 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L L +LG + +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 11 LLAPGGLTLDSLQSVLGELAGPGIDAADLYFQGMISESWSLEDGIVKEGSFNLDQGVGVR 70
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
A SG+KT F YS+ I+++ L A ++ RSI+ NG+++ + + LY+ + +
Sbjct: 71 AQSGEKTGFAYSNAITEDALRTAARAARSISRAGQNGRVQAFTSQD---VAQLYAPDNPL 127
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
++ EK++LL+R++ R D R+ +V +++G ++ IL+ DG + AD+RPLV+
Sbjct: 128 EVLSRAEKVELLKRIDFATRALDSRIQQVSVSMAGVWERILVAAADGSLAADVRPLVRFN 187
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKV 506
V++IVE+NGRRE G G GGR +Y YF TD ++ AL+NLEA PAPAG + V
Sbjct: 188 VSVIVEQNGRRERGGHGGGGRTDYRYFLTDDRAMGYAREALRQALVNLEAIPAPAGTLPV 247
Query: 507 VLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSIN 566
VLG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+GTLA RRGS++
Sbjct: 248 VLGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGTLAGRRGSLS 307
Query: 567 IDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLN 626
+DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML
Sbjct: 308 VDDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYMLA 367
Query: 627 GKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGH 686
G+ P+EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+
Sbjct: 368 GQSDPQEIIASVKRGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGN 427
Query: 687 GPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
GP + +VSM+GND+ LD GVG CGKDGQ +PVGVGQPTLKID+ITVGGT
Sbjct: 428 GPEAMSRVSMVGNDLSLDSGVGTCGKDGQSLPVGVGQPTLKIDAITVGGTG 478
>gi|165976970|ref|YP_001652563.1| TldD protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
gi|165877071|gb|ABY70119.1| TldD protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
Length = 486
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 254/485 (52%), Positives = 340/485 (70%), Gaps = 13/485 (2%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN LL P L+ L K+L + ++DYAD YFQ +++E+W LE+ I+K G F I
Sbjct: 2 LNQVSESLLAPSGLELSHLSKVLNHFANRQIDYADLYFQLSQDESWSLEDSIIKEGGFYI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++G GVRA+SG+KT F Y+D I + L + RSI N S G++ + K+ K+ Y
Sbjct: 62 DRGFGVRAVSGEKTGFAYADQIGLSQLEQCATAARSITNAS-GQLSV-KSFKQTNAIKRY 119
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + +++ +K++LL V+K+AR +DPRVI+V A LS Y+ +L+ DG + ADIR
Sbjct: 120 ASVNPLDTLSREQKVELLHLVDKVARAEDPRVIQVNAGLSAVYEEMLVAATDGTLAADIR 179
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----------TDMILEKCVSNSVNSA 490
PLV+L V+++VE+N +RE G++G GGR+ N+F D +V A
Sbjct: 180 PLVRLSVSVLVEENSKRERGSAGAGGRFGLNWFFEPQVVNGEMTGDTRAVYLAKEAVRMA 239
Query: 491 LINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEI 550
L+NL A PAPAG M +VLG GWPGILLHEA+GHGLEGDFNRK SS F+ IG+ + S
Sbjct: 240 LVNLSAMPAPAGTMPIVLGAGWPGILLHEAVGHGLEGDFNRKESSLFTGKIGELVTSPLC 299
Query: 551 TIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRES 610
TIVD+GT+ N RGSI +DDEG P+Q LIENGILKGYMQD +NARLM ++ TGN RRES
Sbjct: 300 TIVDDGTVPNVRGSITVDDEGVPSQRNVLIENGILKGYMQDKLNARLMGVAPTGNGRRES 359
Query: 611 FAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIK 670
+AH+P+PRMTNTY+ G EE+I SV G+YA +FSGGQVDIT+GKFVFS ++AY+I+
Sbjct: 360 YAHLPMPRMTNTYLTEGSHSFEEMIESVDYGIYAPHFSGGQVDITSGKFVFSTAEAYLIE 419
Query: 671 NGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS 730
GKIT V GATLIG G + +++VSM+G M+LDPG+G CGK+GQ VPVGVGQPT+K+D
Sbjct: 420 KGKITKQVTGATLIGSGIDAMQQVSMVGKKMELDPGIGTCGKEGQSVPVGVGQPTVKLDK 479
Query: 731 ITVGG 735
ITVGG
Sbjct: 480 ITVGG 484
>gi|238921340|ref|YP_002934855.1| TldD/PmbA family protein [Edwardsiella ictaluri 93-146]
gi|238870909|gb|ACR70620.1| TldD/PmbA family protein [Edwardsiella ictaluri 93-146]
Length = 481
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 254/474 (53%), Positives = 350/474 (73%), Gaps = 9/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL +L+ + L +LG + ++DYAD YFQ + +E+W+LE+ I+K G++ I+QGVGVR
Sbjct: 10 LLAANNLNHQDLYNVLGQLNARRLDYADLYFQSSVHESWVLEDRIIKEGSYHIDQGVGVR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSLYSFTDTI 387
AI G+KT F Y+D I+ L + + RSI Q +G+ + +K + S Y +
Sbjct: 70 AIHGEKTGFAYADQITLQALTQSAHAARSIVREQGDGRSHTLGGLKAV---SRYGTHSPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S+ EKI LL +V+++AR D RV +V A+L+G Y+++L+ +DG + AD+RPLV+L
Sbjct: 127 DSLPREEKIALLAQVDRVARAADARVQEVNASLTGVYELVLVAASDGTLAADVRPLVRLS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEAKPAPAG 502
V+++VE++GRRE G+ G GGR+ Y+ F ++ + +V AL+NL AK APAG
Sbjct: 187 VSVLVEQDGRRERGSCGGGGRFGYDCFLTPHDGEVCADAYAREAVRMALVNLHAKAAPAG 246
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+++AS T+VD+GTL RR
Sbjct: 247 TMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQLGQQVASPLCTVVDDGTLEGRR 306
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+ +DDEG P Q LIENG+L+GYMQD +NARLM M+ TGN RRES+AH+P+PRMTNT
Sbjct: 307 GSLAVDDEGVPGQYNVLIENGVLRGYMQDKLNARLMGMAPTGNGRRESYAHLPMPRMTNT 366
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML G+ P+ II SV+ GLYA NF+GGQVDIT+GKFVFS S+AY+I+ G+IT+PVKGAT
Sbjct: 367 YMLAGESTPQAIIESVEYGLYAPNFAGGQVDITSGKFVFSTSEAYLIEKGRITHPVKGAT 426
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
LIG G ++++SM+GND+ LD GVGVCGK+GQ VPVGVGQPTL++D++TVGGT
Sbjct: 427 LIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSVPVGVGQPTLRLDAMTVGGT 480
>gi|322515649|ref|ZP_08068627.1| U62 family peptidase 2 TldD [Actinobacillus ureae ATCC 25976]
gi|322118300|gb|EFX90583.1| U62 family peptidase 2 TldD [Actinobacillus ureae ATCC 25976]
Length = 486
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 253/485 (52%), Positives = 341/485 (70%), Gaps = 13/485 (2%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN LL P L+ L K+L + ++DYAD YFQ +++E+W LE+ I+K G F I
Sbjct: 2 LNQVSESLLAPSGLELSHLSKVLDHFANRQIDYADLYFQLSQDESWSLEDSIIKEGGFYI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++G GVRA+SG+KT F Y+D I + L + RSI N S G++ + K+ K+ Y
Sbjct: 62 DRGFGVRAVSGEKTGFAYADQIGLSQLEQCATAARSITNAS-GQLSV-KSFKQTNAIKRY 119
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + +++ +K++LL V+K+AR +DPRVI+V A LS Y+ +L+ DG + DIR
Sbjct: 120 ASVNPLDTLSREQKVELLHLVDKVARAEDPRVIQVNAGLSAVYEEMLVAATDGTLATDIR 179
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----------TDMILEKCVSNSVNSA 490
PLV+L V+++VE+NG+RE G++G GGR+ N+F D +V A
Sbjct: 180 PLVRLSVSVLVEENGKRERGSAGAGGRFGLNWFFEPQVVNGEMTGDTRAVYLAKEAVRMA 239
Query: 491 LINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEI 550
L+NL A PAPAG M +VLG GWPGILLHEA+GHGLEGDFNRK SS F+ IG+ + S
Sbjct: 240 LVNLGAMPAPAGTMPIVLGAGWPGILLHEAVGHGLEGDFNRKESSLFTGKIGELVTSPLC 299
Query: 551 TIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRES 610
TIVD+GT+ + RGSI +DDEG P+Q LIENGILKGY+QD +NARLM ++ TGN RRES
Sbjct: 300 TIVDDGTVPDMRGSITVDDEGIPSQRNVLIENGILKGYIQDKLNARLMGVAPTGNGRRES 359
Query: 611 FAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIK 670
+AH+P+PRMTNTY+ G EE+I SV G+YA +FSGGQVDIT+GKFVFS S+AY+I+
Sbjct: 360 YAHLPMPRMTNTYLTEGSHSFEEMIESVDYGIYAPHFSGGQVDITSGKFVFSTSEAYLIE 419
Query: 671 NGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS 730
GKIT PV GATLIG G + +++VSM+G M+LDPG+G CGK+GQ VPVGVGQPT+K+D
Sbjct: 420 KGKITKPVTGATLIGSGIDAMQQVSMVGKKMELDPGIGTCGKEGQSVPVGVGQPTVKLDK 479
Query: 731 ITVGG 735
IT+GG
Sbjct: 480 ITIGG 484
>gi|71736451|ref|YP_276286.1| TldD protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|71557004|gb|AAZ36215.1| TldD protein [Pseudomonas syringae pv. phaseolicola 1448A]
Length = 479
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 263/471 (55%), Positives = 350/471 (74%), Gaps = 5/471 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L L +LG + +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 11 LLAPGGLSLDSLQSVLGELAGPGIDAADLYFQGMISESWSLEDGIVKEGSFNLDQGVGVR 70
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
A SG+KT F YS+ I+++ L A ++ RSI+ NG+++ + + LY+ + +
Sbjct: 71 AQSGEKTGFAYSNAITEDALRTAARAARSISRAGQNGRVQAFTSQD---VAQLYAPDNPL 127
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
++ EK++LL+R++ R D R+ +V +++G ++ IL+ DG + AD+RPLV+
Sbjct: 128 EVLSRAEKVELLKRIDVATRALDSRIQQVSVSMAGVWERILVAAADGSLAADVRPLVRFN 187
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKV 506
V++IVE+NGRRE G G GGR +Y YF TD ++ AL+NLEA PAPAG + V
Sbjct: 188 VSVIVEQNGRRERGGHGGGGRTDYRYFLTDDRAMGYAREALRQALVNLEAIPAPAGTLPV 247
Query: 507 VLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSIN 566
VLG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+GTLA RRGS++
Sbjct: 248 VLGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGTLAGRRGSLS 307
Query: 567 IDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLN 626
+DDEG PT+CTTLIE+G+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML
Sbjct: 308 VDDEGTPTECTTLIESGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYMLG 367
Query: 627 GKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGH 686
G+ P+EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+
Sbjct: 368 GQSDPQEIIASVKRGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGN 427
Query: 687 GPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
GP + +VSM+GND+ LD GVG CGKDGQ +PVGVGQPTLKID+ITVGGT
Sbjct: 428 GPEAMSRVSMVGNDLSLDSGVGTCGKDGQSLPVGVGQPTLKIDAITVGGTG 478
>gi|423093544|ref|ZP_17081340.1| TldD protein [Pseudomonas fluorescens Q2-87]
gi|397884779|gb|EJL01262.1| TldD protein [Pseudomonas fluorescens Q2-87]
Length = 480
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 260/470 (55%), Positives = 344/470 (73%), Gaps = 3/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P + + L +LG++ +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGVTLESLQGVLGDLAGPGIDAADLYFQGQISESWSLEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ L + + + G+ ++ + LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAITLEAL--GAAARAARSISRAGQNGTVQAFSSQDVAQLYAPDNPLE 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ EK++LL+R++ R DPR+ +V +++G ++ IL+ DG + AD+RPLV+ V
Sbjct: 130 VMSRAEKVELLKRIDVATRALDPRIQQVSVSMAGVWERILVASTDGGLAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
++IVE+NGRRE G G GGR +Y YF T+ ++ AL+NLEA PAPAG + VV
Sbjct: 190 SVIVEQNGRRERGGHGGGGRTDYRYFLTEDRAMGYAREALRQALVNLEAIPAPAGTLPVV 249
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+GTLA RRGS+++
Sbjct: 250 LGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGTLAGRRGSLSV 309
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML G
Sbjct: 310 DDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYMLGG 369
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ P EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+G
Sbjct: 370 QSDPAEIIASVKRGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGNG 429
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
P + KVSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 430 PEAMSKVSMVGNDLSLDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|336451793|ref|ZP_08622230.1| Putative Zn-dependent protease-like protein [Idiomarina sp. A28L]
gi|336281606|gb|EGN74886.1| Putative Zn-dependent protease-like protein [Idiomarina sp. A28L]
Length = 491
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 268/483 (55%), Positives = 355/483 (73%), Gaps = 17/483 (3%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL +LD L L +++ VDYAD Y Q + +E W+LE+GIVK+G+F+I +G+GVR
Sbjct: 10 LLHNAELDYSALQNSLQSIYSGSVDYADIYLQSSIHEAWVLEDGIVKSGSFNIERGLGVR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
AISG+KT F Y+D I L A + R IA+ +G+ + + + LY + +
Sbjct: 70 AISGEKTGFAYADSIDPAALKRASAAARGIAD--HGENRTVAALNAGNAKPLYGVDNPLD 127
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
S + ++KI+LL+ ++K AR DPR+ +V +L+G Y+ IL+ DG + +DIRPLV+L
Sbjct: 128 SFSEQKKIELLQTMDKYARKLDPRIHEVSVSLTGTYEHILVAATDGTLASDIRPLVRLNC 187
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-------TDMILEKC--------VSNSVNSALIN 493
+++ E+NGRRE G+SG GGR +Y+YF TD + V +V ALI
Sbjct: 188 SVLAEQNGRRERGSSGGGGRVDYHYFMQPVFIDTDSASKGSDKLRYLSYVDEAVRQALIM 247
Query: 494 LEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIV 553
LEAKPAPAG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+S++S IG+++A+K TIV
Sbjct: 248 LEAKPAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRKGASSYSGRIGEQVAAKGCTIV 307
Query: 554 DNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAH 613
D+GT+ANRRGS+++DDEG P+Q LIE+G L GYMQD +NARLM ++ TGN RRES+AH
Sbjct: 308 DDGTIANRRGSLSVDDEGTPSQYNVLIEDGRLVGYMQDKLNARLMGVAPTGNGRRESYAH 367
Query: 614 IPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGK 673
+P+PRMTNTYML G PEEII+SVK G+YA FSGGQVDIT+GKFVFSAS+AY+I++GK
Sbjct: 368 LPMPRMTNTYMLGGDKTPEEIIASVKRGIYAPQFSGGQVDITSGKFVFSASEAYLIEDGK 427
Query: 674 ITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITV 733
IT P+KGATLIG+GP+ + VSMIGND+ LD G+GVCGKDGQ +PVGVGQPTLKID++TV
Sbjct: 428 ITAPLKGATLIGNGPDAMAAVSMIGNDLSLDTGIGVCGKDGQSLPVGVGQPTLKIDNMTV 487
Query: 734 GGT 736
GGT
Sbjct: 488 GGT 490
>gi|154251122|ref|YP_001411946.1| peptidase U62 modulator of DNA gyrase [Parvibaculum lavamentivorans
DS-1]
gi|154155072|gb|ABS62289.1| peptidase U62 modulator of DNA gyrase [Parvibaculum lavamentivorans
DS-1]
Length = 477
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 246/464 (53%), Positives = 334/464 (71%), Gaps = 7/464 (1%)
Query: 275 LDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDK 334
LD + ++G D + + ++ ++E ++G +KT +F NQG G+R ++G+
Sbjct: 15 LDRDRVSALVGETLSG-ADDGELFMEYRQSEVLGFDDGRLKTASFDTNQGFGLRCVAGEA 73
Query: 335 TAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINS-LYSFTDTISSINIR 393
T + ++ ++S+ L A + +++ G + + N+ LYS + + + +
Sbjct: 74 TGYAHASELSEAALKRASDAVQAVKTGHTG----VSAEGPARTNTHLYSDENPLGAQSFE 129
Query: 394 EKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVE 453
EK+KLL ++ AR KDPR+ +V A+L+GE+ + I R DG + DIRPLV+L V I+
Sbjct: 130 EKVKLLAEIDAYARAKDPRIQQVSASLAGEWQAVEIVRADGSSLRDIRPLVRLNVAIVAG 189
Query: 454 KNGRREIGNSGCGGRYNYNYFTD-MILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGW 512
+NGR+E G+ G GGR Y+ F D + + V ++ AL+NLEA PAPAG M VVLGPGW
Sbjct: 190 ENGRQETGSYGVGGRMGYDVFIDPLKWQAQVDEALRQALVNLEAVPAPAGEMDVVLGPGW 249
Query: 513 PGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGN 572
PGILLHEAIGHGLEGDFNRK +SAF+ +G+R+A+ IT+VD+GTLA+RRGS+ IDDEG
Sbjct: 250 PGILLHEAIGHGLEGDFNRKKTSAFAGLLGQRVAAPGITVVDDGTLADRRGSLTIDDEGT 309
Query: 573 PTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPE 632
PT T LIE+GILKGYMQD +NARLM M+ TGN RRES+AH P+PRMTNTYML+G P
Sbjct: 310 PTSRTVLIEDGILKGYMQDRLNARLMGMAATGNGRRESYAHQPMPRMTNTYMLSGHHDPS 369
Query: 633 EIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILK 692
EI++SVK GLYA +F GGQVDIT+GKFVF+ ++AY+I++GKI PVKGATLIG+GP++L
Sbjct: 370 EILASVKKGLYAVSFGGGQVDITSGKFVFTCTEAYMIEDGKIGAPVKGATLIGNGPDVLT 429
Query: 693 KVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
+VSMIGNDMKLDPG+G CGK GQ VPVGVGQPTL+ID +TVGGT
Sbjct: 430 RVSMIGNDMKLDPGIGTCGKAGQGVPVGVGQPTLRIDGLTVGGT 473
>gi|398992886|ref|ZP_10695845.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM21]
gi|398135963|gb|EJM25064.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM21]
Length = 480
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 260/470 (55%), Positives = 342/470 (72%), Gaps = 3/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P + + L +LG++ +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGVTIESLQGVLGDLAGPGIDAADLYFQGQISESWALEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ L + + + G+ ++ + LY + +
Sbjct: 72 AQSGEKTGFAYSNAITLEAL--GAAARAARSISRAGQNGTVQAFTTQDVAQLYGPDNPLE 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
+ EK++LL+R++ R DPR+ +V +++G ++ IL+ DG + AD+RPLV+ V
Sbjct: 130 VMTRAEKVELLKRIDAATRALDPRIQQVTVSMAGVWERILVASTDGGLAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
++IVE+NGRRE G G GGR +Y YF +D ++ AL+NLEA PAPAG + VV
Sbjct: 190 SVIVEQNGRRERGGHGGGGRTDYRYFLSDDRAMGYAREALRQALVNLEAIPAPAGTLPVV 249
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+GTLA RRGS+++
Sbjct: 250 LGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGTLAGRRGSLSV 309
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML G
Sbjct: 310 DDEGTPTKCTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYMLAG 369
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ P EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+G
Sbjct: 370 ESDPAEIIASVKRGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGNG 429
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
P + KVSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 430 PEAMSKVSMVGNDLSLDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|417855365|ref|ZP_12500496.1| hypothetical protein AAUPMG_02028 [Pasteurella multocida subsp.
multocida str. Anand1_goat]
gi|338216205|gb|EGP02364.1| hypothetical protein AAUPMG_02028 [Pasteurella multocida subsp.
multocida str. Anand1_goat]
Length = 482
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 257/499 (51%), Positives = 350/499 (70%), Gaps = 22/499 (4%)
Query: 244 IINQVKNCILISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTK 303
+IN V N +L P N+ + L FDL + ++DYAD YFQ ++
Sbjct: 1 MINTVSNTLLT------PSNLTLNDLQNTFDL-----------LSHRQIDYADLYFQLSQ 43
Query: 304 NENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSN 363
+ENW+LE+GI+K G F I++GVGVRA+SG+KT F YSD I ++ + + IA
Sbjct: 44 DENWVLEDGIIKEGGFHIDRGVGVRAVSGEKTGFAYSDQIDLVSIQQCADAVKGIAQSKQ 103
Query: 364 GKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGE 423
G + + ++ Y + ++S++ +KI LL V+KIAR +DPRV +V A+LS
Sbjct: 104 GNRIVPQGFHQVDPILRYQAINPLNSLSKEKKIALLYLVDKIARAEDPRVTRVSASLSAV 163
Query: 424 YDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF--TDMILEK 481
Y+ +LI DG + ADIRPLV+L ++++VE++G+RE G++G GGR+ ++F T+ +
Sbjct: 164 YEEVLIVATDGTLAADIRPLVRLSISVLVEQDGKRERGSAGAGGRFGLDWFLATESGEVR 223
Query: 482 CV---SNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFS 538
V +V AL+NL A APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS FS
Sbjct: 224 AVYFAKEAVRQALVNLSAIAAPAGMMPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSLFS 283
Query: 539 NCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLM 598
IG+ + S TIVD+GTL +RRGSI +DDEG P Q LI++GIL+GYMQD MNARLM
Sbjct: 284 GKIGELVTSPLCTIVDDGTLQDRRGSITVDDEGVPGQYNVLIKDGILQGYMQDKMNARLM 343
Query: 599 NMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGK 658
++ TGN RRES+AH+P+PRMTNTYML G+ +++I+SV G++A +F GGQVDIT+GK
Sbjct: 344 GVAPTGNGRRESYAHLPMPRMTNTYMLAGQSQFDDLIASVDRGIFAPHFGGGQVDITSGK 403
Query: 659 FVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVP 718
FVFS S+AY+I+NGKIT PVKGATLIG G +++ +SM+ + +++D GVGVCGK+GQ VP
Sbjct: 404 FVFSTSEAYLIENGKITKPVKGATLIGSGIEVMQNISMVADKVEIDHGVGVCGKEGQSVP 463
Query: 719 VGVGQPTLKIDSITVGGTN 737
VGVGQP LKID ITVGGTN
Sbjct: 464 VGVGQPALKIDKITVGGTN 482
>gi|422682182|ref|ZP_16740449.1| TldD protein [Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|331011523|gb|EGH91579.1| TldD protein [Pseudomonas syringae pv. tabaci str. ATCC 11528]
Length = 479
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 263/471 (55%), Positives = 349/471 (74%), Gaps = 5/471 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L L +LG + +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 11 LLAPGGLSLDSLQSVLGELAGPGIDAADLYFQGMISESWSLEDGIVKEGSFNLDQGVGVR 70
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
A SG+KT F YS+ I+++ L A ++ RSI+ NG+++ + + LY+ + +
Sbjct: 71 AQSGEKTGFAYSNAITEDALRTAARAARSISRAGQNGRVQAFTSQD---VAQLYAPDNPL 127
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
++ EK++LL+R++ R D R+ +V +++G ++ IL+ DG + D+RPLV+
Sbjct: 128 EVLSRAEKVELLKRIDVATRALDSRIQQVSVSMAGVWERILVAAADGSLAPDVRPLVRFN 187
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKV 506
V++IVE+NGRRE G G GGR +Y YF TD ++ AL+NLEA PAPAG + V
Sbjct: 188 VSVIVEQNGRRERGGHGGGGRTDYRYFLTDDRAMGYAREALRQALVNLEAIPAPAGTLPV 247
Query: 507 VLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSIN 566
VLG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+GTLA RRGS++
Sbjct: 248 VLGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGTLAGRRGSLS 307
Query: 567 IDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLN 626
+DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML
Sbjct: 308 VDDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYMLG 367
Query: 627 GKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGH 686
G+ P+EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+
Sbjct: 368 GQSDPQEIIASVKRGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGN 427
Query: 687 GPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
GP + +VSM+GND+ LD GVG CGKDGQ +PVGVGQPTLKID+ITVGGT
Sbjct: 428 GPEAMSRVSMVGNDLSLDSGVGTCGKDGQSLPVGVGQPTLKIDAITVGGTG 478
>gi|398858586|ref|ZP_10614275.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM79]
gi|398239045|gb|EJN24764.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM79]
Length = 480
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 261/470 (55%), Positives = 342/470 (72%), Gaps = 3/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P + + L +LG++ +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGVTIESLQGVLGDLAGPGIDAADLYFQGQISESWALEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ L + + + G+ ++ + LY + +
Sbjct: 72 AQSGEKTGFAYSNAITLEAL--GAAARAARSISRAGQNGTVQAFTTQDVTQLYGPDNPLE 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
+ EK++LL+R++ R DPR+ +V +++G ++ ILI DG + AD+RPLV+ V
Sbjct: 130 VMTRAEKVELLKRIDVATRALDPRIQQVTVSMAGVWERILIASTDGGLAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
++IVE+NGRRE G G GGR +Y YF +D ++ AL+NLEA PAPAG + VV
Sbjct: 190 SVIVEQNGRRERGGHGGGGRTDYRYFLSDDRAMGYAREALRQALVNLEAIPAPAGTLPVV 249
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+GTLA RRGS+++
Sbjct: 250 LGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGTLAGRRGSLSV 309
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML G
Sbjct: 310 DDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYMLGG 369
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ P EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+G
Sbjct: 370 ESDPAEIIASVKKGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGNG 429
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
P + KVSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 430 PEAMSKVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|146281409|ref|YP_001171562.1| C69 family peptidase [Pseudomonas stutzeri A1501]
gi|339493002|ref|YP_004713295.1| peptidase U62, modulator of DNA gyrase [Pseudomonas stutzeri ATCC
17588 = LMG 11199]
gi|145569614|gb|ABP78720.1| peptidase U62, modulator of DNA gyrase [Pseudomonas stutzeri A1501]
gi|338800374|gb|AEJ04206.1| peptidase U62, modulator of DNA gyrase [Pseudomonas stutzeri ATCC
17588 = LMG 11199]
Length = 480
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 262/447 (58%), Positives = 339/447 (75%), Gaps = 3/447 (0%)
Query: 292 VDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINA 351
VD AD YFQ +E+W+LE+GIVK G F + QGVGVRA+SG+KT F YS+ I+ + L A
Sbjct: 35 VDAADLYFQDQVSESWVLEDGIVKEGGFHLEQGVGVRALSGEKTGFAYSNAITADALRQA 94
Query: 352 VKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDP 411
++ RSIA +G+ +K + + LY + + ++ EK+ LL+R++ R DP
Sbjct: 95 AQAARSIAR--SGQQGQVKVLGRAAFAPLYHQDNPLDGLSRAEKVDLLKRIDVATRALDP 152
Query: 412 RVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNY 471
R+ +V +L+G ++ IL+ DG + ADIRPLV+ V++IVE+NGRRE G G GGR Y
Sbjct: 153 RIKQVTVSLAGVWEHILVAAMDGGLAADIRPLVRFNVSVIVEQNGRRERGGQGGGGRTGY 212
Query: 472 NYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFN 530
YF ++ ++ AL+NLEA PAPAG + VVLGPGW G+LLHEA+GHGLEGDFN
Sbjct: 213 QYFLSEDRAMGYAREALRQALVNLEAVPAPAGSLPVVLGPGWSGVLLHEAVGHGLEGDFN 272
Query: 531 RKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQ 590
RKGSSA+S IG+++ASK TIVD+GTLA+RRGS+++DDEG PTQCTTLIENGILKGY+Q
Sbjct: 273 RKGSSAYSGRIGQQVASKLCTIVDDGTLADRRGSLSVDDEGTPTQCTTLIENGILKGYIQ 332
Query: 591 DIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGG 650
D +NARLM ++ TGN RRES+AH+P+PRMTNTYML G+ PEEII SVK G+Y + GG
Sbjct: 333 DKLNARLMGVAPTGNGRRESYAHLPMPRMTNTYMLAGESDPEEIIRSVKKGIYCASLGGG 392
Query: 651 QVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVC 710
QVDIT+GKFVFS S+AY++++G+IT PVKGATLIG+GP ++ +VSM+GND+ LD GVG C
Sbjct: 393 QVDITSGKFVFSTSEAYLVEDGRITAPVKGATLIGNGPEVMNRVSMVGNDLALDSGVGTC 452
Query: 711 GKDGQMVPVGVGQPTLKIDSITVGGTN 737
GKDGQ VPVGVGQPTLKID ITVGGT
Sbjct: 453 GKDGQSVPVGVGQPTLKIDEITVGGTG 479
>gi|226943400|ref|YP_002798473.1| peptidase U62, modulator of DNA gyrase activity [Azotobacter
vinelandii DJ]
gi|226718327|gb|ACO77498.1| Peptidase U62, modulator of DNA gyrase activity [Azotobacter
vinelandii DJ]
Length = 480
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 267/472 (56%), Positives = 350/472 (74%), Gaps = 7/472 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P LD L +LG + +D AD YFQ +E+W+LE+GIVK G+F ++QGVG R
Sbjct: 12 LLSPGGLDLDALPALLGELAGPGIDAADLYFQSQVSESWVLEDGIVKEGSFHLDQGVGAR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ L A ++ RSIA +G+ ++ + LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAITGEALRQAAQAARSIAR--SGQSGRVQAFTGASVTRLYAADNPLE 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
I+ K++LL+ V+ R DPR+ +V +L+G ++ ILI +DG + AD+RPLV+ V
Sbjct: 130 VIDRAAKVELLKCVDAATRSLDPRIKQVTVSLAGAWEHILIAASDGSLGADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVS---NSVNSALINLEAKPAPAGIMK 505
++IVE+NGRRE G G GGR +Y +F D E+ + +V AL+NLE PAPAG +
Sbjct: 190 SVIVEQNGRRERGGHGGGGRTDYRFFLDE--ERAMGYAREAVRQALVNLETIPAPAGTLP 247
Query: 506 VVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSI 565
VVLGPGW G+LLHEA+GHGLEGDFNRKGSSA+S IG+++AS TIVD+GTLA RRGS+
Sbjct: 248 VVLGPGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRIGEQVASSLCTIVDDGTLAGRRGSL 307
Query: 566 NIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYML 625
++DDEG PTQCTTLIENGIL+GYMQD +NARLM ++ TGN RRES++H+P+PRMTNTYML
Sbjct: 308 SLDDEGTPTQCTTLIENGILRGYMQDKLNARLMGVAPTGNGRRESYSHLPMPRMTNTYML 367
Query: 626 NGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIG 685
G+ PEEII+SVK G+Y + GGQVDIT+GKFVFS S+AY+I++G+IT PVKGATLIG
Sbjct: 368 AGESEPEEIIASVKKGIYCASLGGGQVDITSGKFVFSTSEAYLIEDGRITAPVKGATLIG 427
Query: 686 HGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
+GP ++ +VSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 428 NGPEVMTRVSMVGNDLVLDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|359298600|ref|ZP_09184439.1| TldD-like protein [Haemophilus [parainfluenzae] CCUG 13788]
Length = 486
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 248/478 (51%), Positives = 341/478 (71%), Gaps = 13/478 (2%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L+ L ++L ++DYAD YFQ +++E+W LE+ I+K G F I++G GVR
Sbjct: 9 LLAPSGLELSHLTQVLDQFSTRQIDYADLYFQLSQDESWALEDSIIKEGGFYIDRGFGVR 68
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+SG+KT F Y+D I L+ + RSI +S GK+ ++ N K+ Y+ + +
Sbjct: 69 AVSGEKTGFAYADQIGLEQLMQCATAARSITAES-GKL-LVNNFKETTACKRYASINPLE 126
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
+++ +K++LL V++ AR +DPRV++V A++S Y+ +L+ DG + ADIRPLV+L V
Sbjct: 127 TLSREQKVELLHLVDRTARKEDPRVVQVNASISAVYEEMLVAATDGTLAADIRPLVRLSV 186
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-------TDMI----LEKCVSNSVNSALINLEAK 497
+++VE+NG+RE G++G GGRY +F +M+ E +V AL+NL A
Sbjct: 187 SVLVEENGKRERGSAGAGGRYGLTWFLEPQVVNGEMVGYNRAEFLAKEAVRMALVNLGAM 246
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
PAPAG M +VLG GWPGILLHEA+GHGLEGDFNRK SS F+ IG+++ S TIVD+GT
Sbjct: 247 PAPAGTMPIVLGAGWPGILLHEAVGHGLEGDFNRKESSLFTGKIGEQVTSPLCTIVDDGT 306
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
+ N RGS+ +DDEG P+Q LIENGILKGY+QD +NARLM ++ TGN RRES+AH+P+P
Sbjct: 307 IENVRGSMTVDDEGVPSQRNVLIENGILKGYLQDKLNARLMGVAPTGNGRRESYAHLPMP 366
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNTY+ G E +I SV G+YA +FSGGQVDIT+GKFVFS ++AY+I+ GKIT P
Sbjct: 367 RMTNTYLTEGHDEFEAMIESVDYGIYAPHFSGGQVDITSGKFVFSTAEAYLIEKGKITKP 426
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
V GATLIG G + +++VSM+G M+LDPG+G CGK+GQ VPVGVGQPT+K+D ITVGG
Sbjct: 427 VTGATLIGSGIDAMQQVSMVGKKMQLDPGIGTCGKEGQSVPVGVGQPTVKLDKITVGG 484
>gi|256821865|ref|YP_003145828.1| peptidase U62 modulator of DNA gyrase [Kangiella koreensis DSM
16069]
gi|256795404|gb|ACV26060.1| peptidase U62 modulator of DNA gyrase [Kangiella koreensis DSM
16069]
Length = 478
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 240/468 (51%), Positives = 342/468 (73%), Gaps = 3/468 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
+ E DL +L + + + + Y+D + Q +++ W LE+GIVK +F++N+G+GVR
Sbjct: 12 IFEESDLSIAVLEDAIRKLHRFDISYSDIFIQEVQHQYWQLEDGIVKDASFNLNKGLGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
AI G+KT+F Y++ + L NA+ + S+ S + + + ++ LY+ +
Sbjct: 72 AIEGEKTSFAYANQLQTTALDNAISAATSM---SRARKQGAVSFNRLDPKQLYTSQPVLF 128
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ ++KI LL +++ AR D +V +VI +LS + +++ +DG+I ADIRP+++L V
Sbjct: 129 AVEQQQKIDLLRQLDAKARHLDEKVQQVIVSLSAVDEQMMVLASDGVIAADIRPMIRLNV 188
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVL 508
++IVE GRRE G++G GGRY++ + L+ +V ALINL+A APAG+M VVL
Sbjct: 189 SVIVEHQGRRERGSAGLGGRYDWQTLLEANLDDLAQTAVTQALINLDAIEAPAGLMPVVL 248
Query: 509 GPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINID 568
G GWPG+LLHEA+GHGLEGDFNRKGSSA++ IG+++AS T+VD+GTL N+RGS+++D
Sbjct: 249 GNGWPGVLLHEAVGHGLEGDFNRKGSSAYAGKIGQKVASDLCTVVDDGTLPNQRGSLSVD 308
Query: 569 DEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGK 628
DEG +Q T LIENG+LKGYMQD NA+LM TGN RRES+AH+P+PRMTNTYM++G+
Sbjct: 309 DEGTVSQSTVLIENGVLKGYMQDKHNAQLMGQKATGNGRRESYAHLPMPRMTNTYMMSGE 368
Query: 629 FHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGP 688
P++II SVK G+YA NF+GGQVDIT+G FVFSAS+AY+I++GKIT P+KGATL G+GP
Sbjct: 369 SDPQDIIKSVKKGIYAPNFAGGQVDITSGNFVFSASEAYLIEDGKITAPIKGATLTGNGP 428
Query: 689 NILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
+LK+VSM+GND LDPG+GVCGKDGQ + V VGQPTLK+D +TVGGT
Sbjct: 429 EVLKRVSMVGNDSMLDPGIGVCGKDGQSIAVCVGQPTLKVDQMTVGGT 476
>gi|398938699|ref|ZP_10668001.1| putative Zn-dependent protease-like protein [Pseudomonas sp.
GM41(2012)]
gi|398165171|gb|EJM53291.1| putative Zn-dependent protease-like protein [Pseudomonas sp.
GM41(2012)]
Length = 480
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 260/470 (55%), Positives = 342/470 (72%), Gaps = 3/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P + + L +LG++ +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGVTIESLQGVLGDLAGPGIDAADLYFQGQISESWALEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ L + + + G+ ++ + LY + +
Sbjct: 72 AQSGEKTGFAYSNAITLEAL--GAAARAARSISRAGQNGTVQAFTTQDVAQLYGPDNPLE 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
+ EK++LL+R++ R DPR+ +V +++G ++ IL+ DG + AD+RPLV+ V
Sbjct: 130 VMTRAEKVELLKRIDVATRALDPRIQQVTVSMAGVWERILVASTDGGLAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
++IVE+NGRRE G G GGR +Y YF +D ++ AL+NLEA PAPAG + VV
Sbjct: 190 SVIVEQNGRRERGGHGGGGRTDYRYFLSDDRAMSYAREALRQALVNLEAIPAPAGTLPVV 249
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+GTLA RRGS+++
Sbjct: 250 LGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGTLAGRRGSLSV 309
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML G
Sbjct: 310 DDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYMLAG 369
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ P EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+G
Sbjct: 370 ESDPAEIIASVKRGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGNG 429
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
P + KVSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 430 PEAMSKVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|398876189|ref|ZP_10631348.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM67]
gi|398205120|gb|EJM91909.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM67]
Length = 480
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 260/470 (55%), Positives = 342/470 (72%), Gaps = 3/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P + + L +LG++ +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGVTIESLQGVLGDLAGPGIDAADLYFQGQISESWALEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ L + + + G+ ++ + LY + +
Sbjct: 72 AQSGEKTGFAYSNAITLEAL--GAAARAARSISRAGQNGTVQAFTTQDVAQLYGPDNPLE 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
+ EK++LL+R++ R DPR+ +V +++G ++ IL+ DG + AD+RPLV+ V
Sbjct: 130 VMTRAEKVELLKRIDVATRALDPRIQQVTVSMAGVWERILVASTDGSLAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
++IVE+NGRRE G G GGR +Y YF +D ++ AL+NLEA PAPAG + VV
Sbjct: 190 SVIVEQNGRRERGGHGGGGRTDYRYFLSDDRAMGYAREALRQALVNLEAIPAPAGTLPVV 249
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+GTLA RRGS+++
Sbjct: 250 LGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGTLAGRRGSLSV 309
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML G
Sbjct: 310 DDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYMLAG 369
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ P EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+G
Sbjct: 370 ESDPAEIIASVKRGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGNG 429
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
P + KVSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 430 PEAMSKVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|398840678|ref|ZP_10597911.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM102]
gi|398901419|ref|ZP_10650296.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM50]
gi|398109883|gb|EJL99795.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM102]
gi|398179703|gb|EJM67303.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM50]
Length = 480
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 261/470 (55%), Positives = 342/470 (72%), Gaps = 3/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P + + L +LG++ +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGVTIESLQGVLGDLAGPGIDAADLYFQGQISESWALEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ L + + + G+ ++ + LY + +
Sbjct: 72 AQSGEKTGFAYSNAITLEAL--GAAARAARSISRAGQNGTVQAFTTQDVAQLYGPDNPLE 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
+ EK++LL+R++ R DPR+ +V +++G ++ ILI DG + AD+RPLV+ V
Sbjct: 130 VMTRAEKVELLKRIDVATRALDPRIQQVTVSMAGVWERILIASTDGGLAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
++IVE+NGRRE G G GGR +Y YF +D ++ AL+NLEA PAPAG + VV
Sbjct: 190 SVIVEQNGRRERGGHGGGGRTDYRYFLSDDRAMGYAREALRQALVNLEAIPAPAGTLPVV 249
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+GTLA RRGS+++
Sbjct: 250 LGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGTLAGRRGSLSV 309
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML G
Sbjct: 310 DDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYMLAG 369
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ P EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+G
Sbjct: 370 ESDPAEIIASVKRGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGNG 429
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
P + KVSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 430 PEAMSKVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|28871600|ref|NP_794219.1| tldD protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|28854852|gb|AAO57914.1| tldD protein [Pseudomonas syringae pv. tomato str. DC3000]
Length = 479
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 263/471 (55%), Positives = 349/471 (74%), Gaps = 5/471 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L L +LG + +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 11 LLAPGGLTLDSLQSVLGELAGPGIDAADLYFQGMISESWSLEDGIVKEGSFNLDQGVGVR 70
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
A SG+KT F YS+ I+++ L A ++ RSI+ NG+++ + + LY+ + +
Sbjct: 71 AQSGEKTGFAYSNAITEDALRTAARAARSISRAGQNGRVQAFTSQD---VAQLYAPDNPL 127
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
++ EK++LL+R++ R D R+ +V +++G ++ IL+ DG + AD+RPLV+
Sbjct: 128 EVLSRAEKVELLKRIDVATRALDSRIQQVSVSMAGVWERILVAAADGSLAADVRPLVRFN 187
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKV 506
V++IVE+NGRRE G G GGR +Y YF TD ++ AL+NLEA PAPAG + V
Sbjct: 188 VSVIVEQNGRRERGGHGGGGRTDYRYFLTDDRAMGYAREALRQALVNLEAIPAPAGTLPV 247
Query: 507 VLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSIN 566
VLG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+GTLA RRGS++
Sbjct: 248 VLGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGTLAGRRGSLS 307
Query: 567 IDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLN 626
+DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML
Sbjct: 308 VDDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYMLA 367
Query: 627 GKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGH 686
G+ P+EII+SVK G+Y N GGQVDIT+GKFVFS +AY+I++GKIT PVKGATLIG+
Sbjct: 368 GQSDPQEIIASVKRGIYCANLGGGQVDITSGKFVFSTCEAYLIEDGKITAPVKGATLIGN 427
Query: 687 GPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
GP + +VSM+GND+ LD GVG CGKDGQ +PVGVGQPTLKID+ITVGGT
Sbjct: 428 GPEAMSRVSMVGNDLSLDSGVGTCGKDGQSLPVGVGQPTLKIDAITVGGTG 478
>gi|402304980|ref|ZP_10824042.1| TldD protein [Haemophilus sputorum HK 2154]
gi|400377041|gb|EJP29925.1| TldD protein [Haemophilus sputorum HK 2154]
Length = 486
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 248/478 (51%), Positives = 341/478 (71%), Gaps = 13/478 (2%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L+ L ++L ++DYAD YFQ +++E+W LE+ I+K G F I++G GVR
Sbjct: 9 LLAPSGLELSHLTQVLDQFSARQIDYADLYFQLSQDESWALEDSIIKEGGFYIDRGFGVR 68
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+SG+KT F Y+D I L+ + RSI +S GK+ ++ N K+ Y+ + +
Sbjct: 69 AVSGEKTGFAYADQIGLEQLMQCATAARSITAES-GKL-LVNNFKETTACKRYASINPLE 126
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
+++ +K++LL V++ AR +DPRV++V A++S Y+ +L+ DG + ADIRPLV+L V
Sbjct: 127 TLSREQKVELLHLVDRTARKEDPRVVQVNASISAVYEEMLVAATDGTLAADIRPLVRLSV 186
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-------TDMI----LEKCVSNSVNSALINLEAK 497
+++VE+NG+RE G++G GGRY +F +M+ E +V AL+NL A
Sbjct: 187 SVLVEENGKRERGSAGAGGRYGLTWFLEPQVVNGEMVGYNRAEFLAKEAVRMALVNLGAM 246
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
PAPAG M +VLG GWPGILLHEA+GHGLEGDFNRK SS F+ IG+++ S TIVD+GT
Sbjct: 247 PAPAGTMPIVLGAGWPGILLHEAVGHGLEGDFNRKESSLFTGKIGEQVTSPLCTIVDDGT 306
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
+ N RGS+ +DDEG P+Q LIENGILKGY+QD +NARLM ++ TGN RRES+AH+P+P
Sbjct: 307 IENVRGSMTVDDEGVPSQRNVLIENGILKGYLQDKLNARLMGVAPTGNGRRESYAHLPMP 366
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNTY+ G E +I SV G+YA +FSGGQVDIT+GKFVFS ++AY+I+ GKIT P
Sbjct: 367 RMTNTYLTEGHDEFEAMIESVDYGIYAPHFSGGQVDITSGKFVFSTAEAYLIEKGKITKP 426
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
V GATLIG G + +++VSM+G M+LDPG+G CGK+GQ VPVGVGQPT+K+D ITVGG
Sbjct: 427 VTGATLIGSGIDAMQQVSMVGKKMQLDPGIGTCGKEGQSVPVGVGQPTVKLDKITVGG 484
>gi|398869915|ref|ZP_10625271.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM74]
gi|398210036|gb|EJM96693.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM74]
Length = 480
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 260/471 (55%), Positives = 342/471 (72%), Gaps = 5/471 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P + + L +LG++ +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGVTIESLQGVLGDLAGPGIDAADLYFQGQISESWALEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ L + + + G+ ++ + LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAITLEAL--GAAARAARSISRAGQHGTVQAFSSQDVAQLYAPDNPLE 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
+ EK+ LL+R++ R DPR+ +V +++G ++ IL+ DG + AD+RPLV+ V
Sbjct: 130 VLTRAEKVDLLKRIDAATRALDPRIQQVTVSMAGVWERILVASTDGGLAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF--TDMILEKCVSNSVNSALINLEAKPAPAGIMKV 506
++IVE+NGRRE G G GGR +Y YF D + ++ AL+NLEA PAPAG + V
Sbjct: 190 SVIVEQNGRRERGGHGGGGRTDYRYFLGEDRAM-GYAREALRQALVNLEAIPAPAGTLPV 248
Query: 507 VLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSIN 566
VLG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+GTLA RRGS++
Sbjct: 249 VLGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGTLAGRRGSLS 308
Query: 567 IDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLN 626
+DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML
Sbjct: 309 VDDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYMLA 368
Query: 627 GKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGH 686
G+ P EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+
Sbjct: 369 GESDPAEIIASVKRGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGN 428
Query: 687 GPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
GP + KVSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 429 GPEAMSKVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|398891783|ref|ZP_10645057.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM55]
gi|398186340|gb|EJM73716.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM55]
Length = 480
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 260/471 (55%), Positives = 342/471 (72%), Gaps = 5/471 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P + + L +LG++ +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGVTIESLQGVLGDLAGPGIDAADLYFQGQISESWALEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ L + + + G+ ++ + LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAITLEAL--GAAARAARSISRAGQHGTVQAFTSQDVAQLYAPDNPLE 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
+ EK+ LL+R++ R DPR+ +V +++G ++ IL+ DG + AD+RPLV+ V
Sbjct: 130 VLTRAEKVDLLKRIDAATRALDPRIQQVTVSMAGVWERILVASTDGGLAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF--TDMILEKCVSNSVNSALINLEAKPAPAGIMKV 506
++IVE+NGRRE G G GGR +Y YF D + ++ AL+NLEA PAPAG + V
Sbjct: 190 SVIVEQNGRRERGGHGGGGRTDYRYFLGEDRAM-GYAREALRQALVNLEAIPAPAGTLPV 248
Query: 507 VLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSIN 566
VLG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+GTLA RRGS++
Sbjct: 249 VLGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGTLAGRRGSLS 308
Query: 567 IDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLN 626
+DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML
Sbjct: 309 VDDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYMLA 368
Query: 627 GKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGH 686
G+ P EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+
Sbjct: 369 GESDPAEIIASVKRGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGN 428
Query: 687 GPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
GP + KVSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 429 GPEAMSKVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|398882956|ref|ZP_10637918.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM60]
gi|398197734|gb|EJM84707.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM60]
Length = 480
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 260/470 (55%), Positives = 342/470 (72%), Gaps = 3/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P + + L +LG++ +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGVTIESLQGVLGDLAGPGIDAADLYFQGQISESWALEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ L + + + G+ ++ + LY + +
Sbjct: 72 AQSGEKTGFAYSNAITLEAL--GAAARAARSISRAGQNGTVQAFTTQDVAQLYGPDNPLE 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
+ EK++LL+R++ R DPR+ +V +++G ++ IL+ DG + AD+RPLV+ V
Sbjct: 130 VMTRAEKVELLKRIDVATRALDPRIQQVTVSMAGVWERILVASTDGSLAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
++IVE+NGRRE G G GGR +Y YF +D ++ AL+NLEA PAPAG + VV
Sbjct: 190 SVIVEQNGRRERGGHGGGGRTDYRYFLSDDRAMGYAREALRQALVNLEAIPAPAGTLPVV 249
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+GTLA RRGS+++
Sbjct: 250 LGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGTLAGRRGSLSV 309
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML G
Sbjct: 310 DDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYMLAG 369
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ P EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+G
Sbjct: 370 ESDPAEIIASVKRGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGNG 429
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
P + KVSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 430 PEAMSKVSMVGNDLSLDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|152978586|ref|YP_001344215.1| peptidase U62 modulator of DNA gyrase [Actinobacillus succinogenes
130Z]
gi|150840309|gb|ABR74280.1| peptidase U62 modulator of DNA gyrase [Actinobacillus succinogenes
130Z]
Length = 482
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 250/481 (51%), Positives = 342/481 (71%), Gaps = 5/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN +S LL +L + I M ++DYAD YFQ +++ENW+LE+GI++ G F I
Sbjct: 2 LNTVQSSLLTNSNLSLTDIPNIFDLMSHRRIDYADLYFQLSRDENWVLEDGIIREGGFHI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVGVRA+SG+KT F YSD I+ +L + + IA S +I + ++ Y
Sbjct: 62 DRGVGVRAVSGEKTGFAYSDQINSASLCQCANAVKGIAVTSEQRIIQPVMLTPVQAVQRY 121
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + ++ +KI LL V++ AR + V KV ANL+ Y+ +L+ DG + ADIR
Sbjct: 122 AAINPLDTLTKEQKIDLLRLVDRTARAESRYVTKVSANLTALYEEVLVAATDGTLAADIR 181
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTD-----MILEKCVSNSVNSALINLEA 496
PLV+L V+++VEK+G+RE G++G GGR + N+F D M +V AL+N+ A
Sbjct: 182 PLVRLSVSVLVEKDGKRERGSAGVGGRVSLNWFFDDFNGEMRAVYFAKEAVRQALVNVGA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
AP+G+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS FS IG+ + S TIVD+G
Sbjct: 242 VAAPSGLMPVVLGAGWPGVLLHEAVGHGLEGDFNRKQSSLFSGKIGQLVTSPLCTIVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL NRRGS+ IDDEG P+QC LI+NG+L+GYMQD MNARLM + TGN RRES+AH+P+
Sbjct: 302 TLQNRRGSMTIDDEGVPSQCNVLIKNGVLQGYMQDKMNARLMGVQPTGNGRRESYAHLPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ ++II+SV G++A +F GGQVDIT+GKF FS S+AY+I+ GKIT
Sbjct: 362 PRMTNTYMLAGESRFDDIITSVDYGIFAPHFGGGQVDITSGKFTFSMSEAYLIEKGKITK 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGAT+IG+G +++++SM+GN++++D G+GVCGKDGQ VPVGVGQP KI+ ITVGGT
Sbjct: 422 PVKGATMIGNGIEVMQQISMVGNELEIDHGIGVCGKDGQSVPVGVGQPVCKIEKITVGGT 481
Query: 737 N 737
N
Sbjct: 482 N 482
>gi|378774060|ref|YP_005176303.1| protein TldD [Pasteurella multocida 36950]
gi|386834542|ref|YP_006239858.1| protein TldD [Pasteurella multocida subsp. multocida str. 3480]
gi|425063042|ref|ZP_18466167.1| TldD protein, part of proposed TldE/TldD proteolytic complex
[Pasteurella multocida subsp. gallicida X73]
gi|425065118|ref|ZP_18468238.1| TldD protein, part of proposed TldE/TldD proteolytic complex
[Pasteurella multocida subsp. gallicida P1059]
gi|356596608|gb|AET15334.1| protein TldD [Pasteurella multocida 36950]
gi|385201244|gb|AFI46099.1| TldD [Pasteurella multocida subsp. multocida str. 3480]
gi|404383158|gb|EJZ79613.1| TldD protein, part of proposed TldE/TldD proteolytic complex
[Pasteurella multocida subsp. gallicida X73]
gi|404384309|gb|EJZ80749.1| TldD protein, part of proposed TldE/TldD proteolytic complex
[Pasteurella multocida subsp. gallicida P1059]
Length = 482
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 256/499 (51%), Positives = 350/499 (70%), Gaps = 22/499 (4%)
Query: 244 IINQVKNCILISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTK 303
+IN V N +L P N+ + L FDL + ++DYAD YFQ ++
Sbjct: 1 MINTVSNTLLT------PSNLTLNDLQNTFDL-----------LSHRQIDYADLYFQLSQ 43
Query: 304 NENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSN 363
+ENW+LE+GI+K G F I++GVGVRA+SG+KT F YSD I ++ + + IA
Sbjct: 44 DENWVLEDGIIKEGGFHIDRGVGVRAVSGEKTGFAYSDQIDLVSIQQCADAVKGIAQSKQ 103
Query: 364 GKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGE 423
G + + ++ Y + ++S++ +KI LL V+KIAR +DPRV +V A+LS
Sbjct: 104 GNRIVPQGFHQVDPILRYQAINPLNSLSKEKKIALLYLVDKIARAEDPRVTRVSASLSAV 163
Query: 424 YDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF--TDMILEK 481
Y+ +LI DG + ADIRPLV+L ++++VE++G+RE G++G GGR+ ++F T+ +
Sbjct: 164 YEEVLIVATDGTLAADIRPLVRLSISVLVEQDGKRERGSAGAGGRFGLDWFLATESGEVR 223
Query: 482 CV---SNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFS 538
V +V AL+NL A APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS F+
Sbjct: 224 AVYFAKEAVRQALVNLSAIAAPAGMMPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSLFT 283
Query: 539 NCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLM 598
IG+ + S TIVD+GTL +RRGSI +DDEG P Q LI++GIL+GYMQD MNARLM
Sbjct: 284 GKIGELVTSPLCTIVDDGTLQDRRGSITVDDEGVPGQYNVLIKDGILQGYMQDKMNARLM 343
Query: 599 NMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGK 658
++ TGN RRES+AH+P+PRMTNTYML G+ +++I+SV G++A +F GGQVDIT+GK
Sbjct: 344 GVAPTGNGRRESYAHLPMPRMTNTYMLAGQSQFDDLIASVDRGIFAPHFGGGQVDITSGK 403
Query: 659 FVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVP 718
FVFS S+AY+I+NGKIT PVKGATLIG G +++ +SM+ + +++D GVGVCGK+GQ VP
Sbjct: 404 FVFSTSEAYLIENGKITKPVKGATLIGSGIEVMQNISMVADKVEIDHGVGVCGKEGQSVP 463
Query: 719 VGVGQPTLKIDSITVGGTN 737
VGVGQP LKID ITVGGTN
Sbjct: 464 VGVGQPALKIDKITVGGTN 482
>gi|421263074|ref|ZP_15714146.1| hypothetical protein KCU_01855 [Pasteurella multocida subsp.
multocida str. P52VAC]
gi|401690022|gb|EJS85352.1| hypothetical protein KCU_01855 [Pasteurella multocida subsp.
multocida str. P52VAC]
Length = 482
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 257/499 (51%), Positives = 348/499 (69%), Gaps = 22/499 (4%)
Query: 244 IINQVKNCILISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTK 303
+IN V N +L P N+ + L FDL + ++DYAD YFQ ++
Sbjct: 1 MINTVSNTLLT------PSNLTLNDLQNTFDL-----------LSHRQIDYADLYFQLSQ 43
Query: 304 NENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSN 363
+ENW+LE+GI+K G F I++GVGVRA+SG+KT F YSD I ++ + + IA
Sbjct: 44 DENWVLEDGIIKEGGFHIDRGVGVRAVSGEKTGFAYSDQIDLVSIQQCADAVKGIAQSKQ 103
Query: 364 GKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGE 423
G + + + Y + ++S+N +KI LL V+KIAR +DPRV +V A+LS
Sbjct: 104 GHRIVPQGFHQADSILRYQAINPLNSLNKEKKIALLYLVDKIARAEDPRVTRVSASLSAV 163
Query: 424 YDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF--TDMILEK 481
Y+ +LI DG + ADIRPLV+L ++++VE++G+RE G++G GGR+ ++F T+ +
Sbjct: 164 YEEVLIVATDGTLAADIRPLVRLSISVLVEQDGKRERGSAGAGGRFGLDWFLATESGEVR 223
Query: 482 CV---SNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFS 538
V +V AL+NL A APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS F+
Sbjct: 224 AVYFAKEAVRQALVNLSAIAAPAGMMPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSLFT 283
Query: 539 NCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLM 598
IG+ + S TIVD+GTL +RRGSI +DDEG P Q LI++GIL+GYMQD MNARLM
Sbjct: 284 GKIGELVTSPLCTIVDDGTLQDRRGSITVDDEGVPGQYNVLIKDGILQGYMQDKMNARLM 343
Query: 599 NMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGK 658
++ TGN RRES+AH+P+PRMTNTYML G+ +++I+SV G++A +F GGQVDIT+GK
Sbjct: 344 GVAPTGNGRRESYAHLPMPRMTNTYMLAGQSEFDDLIASVDRGIFAPHFGGGQVDITSGK 403
Query: 659 FVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVP 718
FVFS S+AY+I+NGKIT PVKGATLIG G +++ +SM+ + + +D GVGVCGK+GQ VP
Sbjct: 404 FVFSTSEAYLIENGKITKPVKGATLIGSGIEVMQNISMVADKVDIDHGVGVCGKEGQSVP 463
Query: 719 VGVGQPTLKIDSITVGGTN 737
VGVGQP LKID ITVGGTN
Sbjct: 464 VGVGQPALKIDKITVGGTN 482
>gi|15602208|ref|NP_245280.1| hypothetical protein PM0343 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12720584|gb|AAK02427.1| TldD [Pasteurella multocida subsp. multocida str. Pm70]
Length = 482
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 256/499 (51%), Positives = 350/499 (70%), Gaps = 22/499 (4%)
Query: 244 IINQVKNCILISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTK 303
+IN V N +L P N+ + L FDL + ++DYAD YFQ ++
Sbjct: 1 MINTVSNTLLT------PSNLTLNDLQNTFDL-----------LSHRQIDYADLYFQLSQ 43
Query: 304 NENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSN 363
+ENW+LE+GI+K G F I++GVGVRA+SG+KT F YSD I ++ + + IA
Sbjct: 44 DENWVLEDGIIKEGGFHIDRGVGVRAVSGEKTGFAYSDQIDLVSIQQCADAVKGIAQSKQ 103
Query: 364 GKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGE 423
G + + ++ Y + ++S++ +KI LL V+KIAR +DPRV +V A+LS
Sbjct: 104 GNRIVPQGFHQVDPILRYQAINPLNSLSKEKKIALLYLVDKIARAEDPRVTRVSASLSAV 163
Query: 424 YDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF--TDMILEK 481
Y+ +LI DG + ADIRPLV+L ++++VE++G+RE G++G GGR+ ++F T+ +
Sbjct: 164 YEEVLIVATDGTLAADIRPLVRLSISVLVEQDGKRERGSAGAGGRFGLDWFLATERGEVR 223
Query: 482 CV---SNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFS 538
V +V AL+NL A APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS F+
Sbjct: 224 AVYFAKEAVRQALVNLSAIAAPAGMMPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSLFT 283
Query: 539 NCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLM 598
IG+ + S TIVD+GTL +RRGSI +DDEG P Q LI++GIL+GYMQD MNARLM
Sbjct: 284 GKIGELVTSPLCTIVDDGTLQDRRGSITVDDEGVPGQYNVLIKDGILQGYMQDKMNARLM 343
Query: 599 NMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGK 658
++ TGN RRES+AH+P+PRMTNTYML G+ +++I+SV G++A +F GGQVDIT+GK
Sbjct: 344 GVAPTGNGRRESYAHLPMPRMTNTYMLAGQSQFDDLIASVDRGIFAPHFGGGQVDITSGK 403
Query: 659 FVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVP 718
FVFS S+AY+I+NGKIT PVKGATLIG G +++ +SM+ + +++D GVGVCGK+GQ VP
Sbjct: 404 FVFSTSEAYLIENGKITKPVKGATLIGSGIEVMQNISMVADKVEIDHGVGVCGKEGQSVP 463
Query: 719 VGVGQPTLKIDSITVGGTN 737
VGVGQP LKID ITVGGTN
Sbjct: 464 VGVGQPALKIDKITVGGTN 482
>gi|330807542|ref|YP_004352004.1| protein tldD [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|378948866|ref|YP_005206354.1| protein TldD [Pseudomonas fluorescens F113]
gi|423695357|ref|ZP_17669847.1| TldD protein [Pseudomonas fluorescens Q8r1-96]
gi|327375650|gb|AEA67000.1| Protein tldD [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|359758880|gb|AEV60959.1| TldD [Pseudomonas fluorescens F113]
gi|388009249|gb|EIK70500.1| TldD protein [Pseudomonas fluorescens Q8r1-96]
Length = 480
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 259/470 (55%), Positives = 344/470 (73%), Gaps = 3/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P + + L +LG++ +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGVTLESLQGVLGDLAGPGIDAADLYFQGQISESWSLEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ L + + + G+ ++ + LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAITLEAL--GAAARAARSISRAGQNGTVQAFSSQDVAQLYAPDNPLE 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ EK++LL+R++ R DPR+ +V +++G ++ IL+ DG + AD+RPLV+ V
Sbjct: 130 VMSRAEKVELLKRIDVATRALDPRIQQVSVSMAGVWERILVASTDGGLAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
++IVE+NGRRE G G GGR +Y YF ++ ++ AL+NLEA PAPAG + VV
Sbjct: 190 SVIVEQNGRRERGGHGGGGRTDYRYFLSEDRAMGYAREALRQALVNLEAIPAPAGTLPVV 249
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+GTLA RRGS+++
Sbjct: 250 LGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGTLAGRRGSLSV 309
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML G
Sbjct: 310 DDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYMLGG 369
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ P EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+G
Sbjct: 370 QSDPAEIIASVKKGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGNG 429
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
P + KVSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 430 PEAMSKVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|167855960|ref|ZP_02478707.1| TldD-like protein [Haemophilus parasuis 29755]
gi|167852897|gb|EDS24164.1| TldD-like protein [Haemophilus parasuis 29755]
Length = 481
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 254/480 (52%), Positives = 341/480 (71%), Gaps = 8/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN + LL P L L K+L + ++DYAD YFQF+++E+W LE+ I+K G F I
Sbjct: 2 LNQVSNSLLLPSGLQLSDLTKVLDHFSGRQIDYADLYFQFSQDESWSLEDSIIKEGGFYI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVGVRA+SG+KT F Y+D IS + L + RSI Q +G++ ++K K+ Y
Sbjct: 62 DRGVGVRAVSGEKTGFAYADQISLSQLEQCAMAARSI-TQESGRL-LVKPFKETTAIKRY 119
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + +++ +K++LL V+K+ R +DPRVI+V ANLS Y+ +L++ D + ADIR
Sbjct: 120 ASINPLDTLSREQKVELLHLVDKVVRAEDPRVIQVNANLSAVYEEMLVSATDSTLAADIR 179
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF------TDMILEKCVSNSVNSALINLE 495
PLV+L ++++VE+NG+RE G++G GGR+ +F D +V A++NL
Sbjct: 180 PLVRLSISVLVEQNGKRERGSAGAGGRFGLEWFLAPHYTGDSRAVYLAKEAVRQAVVNLG 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M +VLG GWPGILLHEA+GHGLEGDFNRK SS F+ IG+ + S TIVD+
Sbjct: 240 AVAAPAGSMPIVLGAGWPGILLHEAVGHGLEGDFNRKESSMFTGRIGELVTSPLCTIVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ N RGSI +DDEG P+Q LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTVPNMRGSITVDDEGVPSQRNVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYM G +E+I SV GLYA +FSGGQVDIT+GKFVFS S+AY+I+ GKIT
Sbjct: 360 MPRMTNTYMTEGNHEFDEMIESVDFGLYAPHFSGGQVDITSGKFVFSTSEAYLIEKGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PV GATLIG G +++VSM+G M+LD G+G CGK+GQ VPVGVGQPT+K+D ITVGG
Sbjct: 420 KPVTGATLIGSGIEAMQQVSMVGKKMELDLGIGTCGKEGQSVPVGVGQPTVKLDKITVGG 479
>gi|24375578|ref|NP_719621.1| microcin-processing peptidase 2 TldD [Shewanella oneidensis MR-1]
gi|24350467|gb|AAN57065.1| microcin-processing peptidase 2 TldD [Shewanella oneidensis MR-1]
Length = 482
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 265/480 (55%), Positives = 360/480 (75%), Gaps = 10/480 (2%)
Query: 263 NIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSIN 322
+ +S+L LD L + L ++ ++KVD++D YFQ +++E+W+LE+GI+K G+F I
Sbjct: 6 QVEQSLLKGGLALDG--LQQYLNSIHQHKVDFSDLYFQGSRHESWVLEDGIIKDGSFHIE 63
Query: 323 QGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYS 382
+GVGVRAISG+KT F Y+DDI+ L AV++ R IA S G+ ++ K+ K +LY
Sbjct: 64 RGVGVRAISGEKTGFAYADDITPAALTAAVEAARGIA--SAGEQTQVQAFKRQKALALYD 121
Query: 383 FTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRP 442
D I+++ +KI LL+ + R D R+I+V+ +L+G ++ IL+ +DG + ADIRP
Sbjct: 122 SLDPIAAMEEVKKINLLKEADAFIRSLDSRIIQVVVSLAGVHEEILVAASDGTLAADIRP 181
Query: 443 LVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF---TDMILEKCVS---NSVNSALINLEA 496
LV+ ++I+E+NG+RE G +G GGR++Y+ D L C + +V A +NL A
Sbjct: 182 LVRFNCSVILEENGKRERGGAGGGGRHDYSVLMVNDDTGLPMCFAFAREAVRQAQVNLNA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSSAFS +G+++ASK +T+VD+G
Sbjct: 242 IDAPAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKGSSAFSGMVGQQVASKLVTVVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TLANRRGS++IDDEG TQ T LIE+GILKGY+QD +NARLM ++ TGN RRES+AH+P+
Sbjct: 302 TLANRRGSLSIDDEGVQTQRTVLIEDGILKGYLQDKLNARLMGVAPTGNGRRESYAHLPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYM +G+ P +II SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NG++T
Sbjct: 362 PRMTNTYMTSGESEPSDIIKSVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIENGEVTQ 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
+KGATLIG+GP + ++SM+GNDM LD GVGVCGKDGQ VPVGVGQPTLK+D +TVGGT
Sbjct: 422 AIKGATLIGNGPEAMSQISMVGNDMALDKGVGVCGKDGQSVPVGVGQPTLKLDKLTVGGT 481
>gi|383309978|ref|YP_005362788.1| U62 family peptidase 2 TldD [Pasteurella multocida subsp. multocida
str. HN06]
gi|380871250|gb|AFF23617.1| U62 family peptidase 2 TldD [Pasteurella multocida subsp. multocida
str. HN06]
Length = 482
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 256/499 (51%), Positives = 350/499 (70%), Gaps = 22/499 (4%)
Query: 244 IINQVKNCILISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTK 303
+IN V N +L P N+ + L FDL + ++DYAD YFQ ++
Sbjct: 1 MINTVSNTLLT------PSNLTLNDLQNTFDL-----------LSHRQIDYADLYFQLSQ 43
Query: 304 NENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSN 363
+ENW+LE+GI+K G F I++GVGVRA+SG+KT F YSD I ++ + + IA
Sbjct: 44 DENWVLEDGIIKEGGFHIDRGVGVRAVSGEKTGFAYSDQIDLVSIQQCADAVKGIAQSKQ 103
Query: 364 GKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGE 423
G + + ++ Y + ++S++ +KI LL V+KIAR +DPRV +V A+LS
Sbjct: 104 GNRIMPQGFHQVDPILRYQAINPLNSLSKEKKIALLYLVDKIARAEDPRVTRVSASLSAV 163
Query: 424 YDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF--TDMILEK 481
Y+ +LI DG + ADIRPLV+L ++++VE++G+RE G++G GGR+ ++F T+ +
Sbjct: 164 YEEVLIVATDGTLAADIRPLVRLSISVLVEQDGKRERGSAGAGGRFGLDWFLATERGEVR 223
Query: 482 CV---SNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFS 538
V +V AL+NL A APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS F+
Sbjct: 224 AVYFAKEAVRQALVNLSAIAAPAGMMPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSLFT 283
Query: 539 NCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLM 598
IG+ + S TIVD+GTL +RRGSI +DDEG P Q LI++GIL+GYMQD MNARLM
Sbjct: 284 GKIGELVTSPLCTIVDDGTLQDRRGSITVDDEGVPGQYNVLIKDGILQGYMQDKMNARLM 343
Query: 599 NMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGK 658
++ TGN RRES+AH+P+PRMTNTYML G+ +++I+SV G++A +F GGQVDIT+GK
Sbjct: 344 GVAPTGNGRRESYAHLPMPRMTNTYMLAGQSQFDDLIASVDRGIFAPHFGGGQVDITSGK 403
Query: 659 FVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVP 718
FVFS S+AY+I+NGKIT PVKGATLIG G +++ +SM+ + +++D GVGVCGK+GQ VP
Sbjct: 404 FVFSTSEAYLIENGKITKPVKGATLIGSGIEVMQNISMVADKVEIDHGVGVCGKEGQSVP 463
Query: 719 VGVGQPTLKIDSITVGGTN 737
VGVGQP LKID ITVGGTN
Sbjct: 464 VGVGQPALKIDKITVGGTN 482
>gi|335424271|ref|ZP_08553282.1| tldD protein [Salinisphaera shabanensis E1L3A]
gi|334889922|gb|EGM28206.1| tldD protein [Salinisphaera shabanensis E1L3A]
Length = 488
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 252/486 (51%), Positives = 342/486 (70%), Gaps = 10/486 (2%)
Query: 260 HPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNF 319
+ ++IA LL +D L LG++ VDYAD YFQ KNE+W+LE+G+V++
Sbjct: 3 NAIDIASDTLLGRAGIDASQLQSALGSLMVPGVDYADLYFQILKNESWLLEDGVVRSAGA 62
Query: 320 SINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINS 379
S +QGVGVRA++G++T F Y+D+++ L A K+ +IA + GK + + + +
Sbjct: 63 STSQGVGVRALAGEQTGFAYADELAFPALTQASKAAAAIARE--GKSASVNALTRRDSGA 120
Query: 380 L--YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIV 437
Y+ D +++ K+ LL +KIAR D RV++V +L+G D +L+ +DG +
Sbjct: 121 ATRYAPIDPAGTLDADAKVSLLHHADKIARDADDRVVRVTVSLAGSSDTMLVAASDGTLA 180
Query: 438 ADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKC------VSNSVNSAL 491
D+RPLV++ V++ VE+NG RE ++G G R Y+YF + +V AL
Sbjct: 181 GDVRPLVRVNVSVQVEENGVRESASAGGGARMGYDYFGTASSDSADRVAGYAREAVRRAL 240
Query: 492 INLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEIT 551
+ L A+ APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+GSS +SN IG+++AS T
Sbjct: 241 VRLYAEAAPAGSLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGSSNYSNRIGEKVASDLCT 300
Query: 552 IVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESF 611
IVD+GTL RRGS+ IDDEG+P C TLIENG L GYMQD NARLM M+ TGNARRES+
Sbjct: 301 IVDDGTLDGRRGSLAIDDEGSPAACNTLIENGRLVGYMQDKHNARLMGMAPTGNARRESY 360
Query: 612 AHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKN 671
AH +PRMTNTYM G+ P++II+SV NG+YA NFSGG VDIT+G FVFSA +AY I+N
Sbjct: 361 AHTIMPRMTNTYMRAGESVPDDIIASVDNGIYAVNFSGGSVDITSGNFVFSADEAYRIEN 420
Query: 672 GKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSI 731
GKI P+KGATLIG+GP++L+++SM+GND+ LD G+GVCGK+GQ VPVGVGQPTLK+D+I
Sbjct: 421 GKIGAPIKGATLIGNGPDVLERISMVGNDLALDEGIGVCGKNGQSVPVGVGQPTLKVDAI 480
Query: 732 TVGGTN 737
TVGGT
Sbjct: 481 TVGGTQ 486
>gi|206603787|gb|EDZ40267.1| Putative peptidase U62, modulator of DNA gyrase [Leptospirillum sp.
Group II '5-way CG']
Length = 485
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 242/467 (51%), Positives = 335/467 (71%), Gaps = 5/467 (1%)
Query: 273 FDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISG 332
F E++L + LG+ ++D AD YF++T E+ LEEG+VK G ++QGVG R ++G
Sbjct: 20 FGTHERVLGQTLGSALGQQIDDADLYFEYTTVESLSLEEGMVKKGGRHVSQGVGARVLAG 79
Query: 333 DKTAFFYSDDISKNTLINAVKSTRSIA---NQSNGKIKIIKNIKKIKINSLYSFTDTISS 389
+KT + +++I TL V++ R+I+ + + ++++ + ++ SLY T
Sbjct: 80 EKTGYAITEEIRPETLQEIVRTARAISLTGSHAENSLRLVPSRRQSP--SLYPVTSEDLD 137
Query: 390 INIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVT 449
+ + +K LL + AR DPRV++V+A++S E +++ R DGLI AD PL+++ VT
Sbjct: 138 VPLTQKKDLLLEADNAARSADPRVVQVMASVSTEMKSVMVVRRDGLISADRLPLIRVNVT 197
Query: 450 IIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLG 509
+I E+NG+R+ G+ G GGR ++ L + A++NL A+ P G M VVLG
Sbjct: 198 VIAEENGQRQTGSYGYGGRISFAEVMGEPLRHAAREAARQAIVNLGARACPTGTMPVVLG 257
Query: 510 PGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDD 569
PGWPGILLHEAIGHGLEGDFNRKG+SAFS IG+R+AS TI+D+GTL +RRGS+N+DD
Sbjct: 258 PGWPGILLHEAIGHGLEGDFNRKGTSAFSGRIGERVASPLCTIIDDGTLPHRRGSLNVDD 317
Query: 570 EGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKF 629
EG PTQ T LIE GILKGY+QD NARLM ++ TGN RRES+AH P+PRMTNT ML+G+
Sbjct: 318 EGTPTQRTVLIEKGILKGYLQDRHNARLMGVAPTGNGRRESYAHPPMPRMTNTIMLSGES 377
Query: 630 HPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPN 689
PEEI+ S+ GLYA NF GGQVDIT+GKFVFS ++AY ++NG+I YPV+GATLIG+GP+
Sbjct: 378 DPEEILRSLDKGLYAVNFGGGQVDITSGKFVFSTAEAYWVENGRIQYPVRGATLIGNGPD 437
Query: 690 ILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
L +VSM+GND++LDPGVG CGKDGQ VPVGVG PT++++ +TVGGT
Sbjct: 438 ALTRVSMVGNDLRLDPGVGTCGKDGQSVPVGVGLPTIRVEDLTVGGT 484
>gi|398862580|ref|ZP_10618172.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM78]
gi|398250119|gb|EJN35467.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM78]
Length = 480
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 259/472 (54%), Positives = 343/472 (72%), Gaps = 7/472 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P + + L +LG++ +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGVTIESLQGVLGDLAGPGIDAADLYFQGQISESWALEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ L + + + G+ ++ + LY + +
Sbjct: 72 AQSGEKTGFAYSNAITLEAL--GAAARAARSISRAGQNGTVQAFTTQDVAQLYGPDNPLE 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
+ EK+ LL+R++ R DPR+ +V +++G ++ IL+ DG + AD+RPLV+ V
Sbjct: 130 VLTRAEKVDLLKRIDAATRALDPRIQQVTVSMAGVWERILVASTDGGLAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVS---NSVNSALINLEAKPAPAGIMK 505
++IVE+NGRRE G G GGR +Y YF + ++ + ++ AL+NLEA PAPAG +
Sbjct: 190 SVIVEQNGRRERGGHGGGGRTDYRYF--LAEDRAMGYAREALRQALVNLEAIPAPAGTLP 247
Query: 506 VVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSI 565
VVLG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+GTLA RRGS+
Sbjct: 248 VVLGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGTLAGRRGSL 307
Query: 566 NIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYML 625
++DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML
Sbjct: 308 SVDDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYML 367
Query: 626 NGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIG 685
G+ P EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG
Sbjct: 368 AGESDPAEIIASVKRGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIG 427
Query: 686 HGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
+GP + KVSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 428 NGPEAMSKVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|88858683|ref|ZP_01133324.1| putative suppressor of CsrA inhibitory activity [Pseudoalteromonas
tunicata D2]
gi|88818909|gb|EAR28723.1| putative suppressor of CsrA inhibitory activity [Pseudoalteromonas
tunicata D2]
Length = 480
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 261/476 (54%), Positives = 350/476 (73%), Gaps = 7/476 (1%)
Query: 266 RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGV 325
S LL+ L + L K L + ++ +DYAD YFQ + +E+W+LE+G+VK G+++I +GV
Sbjct: 6 ESNLLKNSSLCREDLEKTLAFIHQHNIDYADLYFQSSYHESWMLEDGLVKEGSYNIERGV 65
Query: 326 GVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTD 385
GVRA+SGDKT F YSD I+ L A + RSIA G+ K ++ +I ++
Sbjct: 66 GVRAVSGDKTGFSYSDAITLEALNQAASAARSIAKA--GENKTVQIFSEIAHPIQFAAAQ 123
Query: 386 TISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQ 445
ISS++ +K++LL +E R P +V+ +LS Y+ IL+ +DG D RPL++
Sbjct: 124 PISSMSDDKKVELLREIENYIRQLAPEANQVVTSLSAVYEEILVAASDGTFATDRRPLIR 183
Query: 446 LFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEK-----CVSNSVNSALINLEAKPAP 500
L ++++EKNGRRE G +G G R +Y YF +++ K ++++ A INLEA AP
Sbjct: 184 LNCSVLLEKNGRRERGGAGGGARLDYGYFYELVDGKPRWMGYAEDAIHQAQINLEAIDAP 243
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG M VVLG GWPG+LLHEA+GHGLEGDFNRKG+SAFS IG+++AS T+VD+GTLAN
Sbjct: 244 AGAMPVVLGGGWPGVLLHEAVGHGLEGDFNRKGASAFSGRIGEQVASSLCTVVDDGTLAN 303
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+NIDDEG P LIENGILKGY+QD +NARLM ++ TGN RRES+AH+P+PRMT
Sbjct: 304 RRGSLNIDDEGTPAGYNVLIENGILKGYIQDKLNARLMGVAPTGNGRRESYAHLPMPRMT 363
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYML G+ E+II+SVK G++A NF GGQVDIT+GKFVFSAS+AY+I+NGK+T P+KG
Sbjct: 364 NTYMLAGESSQEDIIASVKKGIFAANFGGGQVDITSGKFVFSASEAYLIENGKVTRPIKG 423
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
ATLIG+GP +++K+SM+GND+ LD GVGVCGKDGQ VPVGVGQP+L+ID +TVGGT
Sbjct: 424 ATLIGNGPEVMQKISMVGNDLSLDKGVGVCGKDGQSVPVGVGQPSLRIDELTVGGT 479
>gi|404399136|ref|ZP_10990720.1| putative modulation of DNA gyrase-like protein [Pseudomonas
fuscovaginae UPB0736]
Length = 480
Score = 513 bits (1322), Expect = e-142, Method: Compositional matrix adjust.
Identities = 260/471 (55%), Positives = 345/471 (73%), Gaps = 5/471 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P + + L +LG++ +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGVTIENLQSVLGDLAGPGIDAADLYFQGQISESWALEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTL-INAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTI 387
A SG+KT F YS+ I+ L A + NG+++ + + LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAITLEALGAAARAARSISRAGQNGRVQAFSSRD---VAQLYAPDNPL 128
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
++ EK++LL+R++ R DPR+ +V +++G ++ IL+ DG + AD+RPLV+
Sbjct: 129 DVMSRAEKVELLKRIDVATRALDPRIQQVSVSMAGVWERILVASTDGGLAADVRPLVRFN 188
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKV 506
V++IVE+NGRRE G G GGR +Y YF ++ ++ AL+NLEA PAPAG + V
Sbjct: 189 VSVIVEQNGRRERGGHGGGGRTDYRYFLSEDRAMGYAREALRQALVNLEAVPAPAGTLPV 248
Query: 507 VLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSIN 566
VLG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+R+AS TIVD+GTLA RRGS++
Sbjct: 249 VLGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGERVASSLCTIVDDGTLAGRRGSLS 308
Query: 567 IDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLN 626
+DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML
Sbjct: 309 VDDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYMLG 368
Query: 627 GKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGH 686
G+ P EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+
Sbjct: 369 GESDPAEIIASVKKGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGN 428
Query: 687 GPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
GP + +VSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 429 GPEAMSRVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|398914767|ref|ZP_10657027.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM49]
gi|398177580|gb|EJM65255.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM49]
Length = 480
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 259/471 (54%), Positives = 341/471 (72%), Gaps = 5/471 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P + + L +LG++ +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGVTIESLQGVLGDLAGPGIDAADLYFQGQISESWALEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ L + + + G+ ++ + LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAITLEAL--GAAARAARSISRAGQHGTVQAFTSQDVAQLYAPDNPLE 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
+ EK+ LL+R++ R DPR+ +V +++G ++ IL+ DG + AD+RPLV+ V
Sbjct: 130 VLTRAEKVDLLKRIDAATRALDPRIQQVTVSMAGVWERILVASTDGGLAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF--TDMILEKCVSNSVNSALINLEAKPAPAGIMKV 506
++IVE+NGRRE G G GGR +Y YF D + ++ AL+NLEA PAPAG + V
Sbjct: 190 SVIVEQNGRRERGGHGGGGRTDYRYFLGEDRAM-GYAREALRQALVNLEAIPAPAGTLPV 248
Query: 507 VLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSIN 566
VLG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +AS TIVD+GTLA RRGS++
Sbjct: 249 VLGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASSLCTIVDDGTLAGRRGSLS 308
Query: 567 IDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLN 626
+DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML
Sbjct: 309 VDDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYMLA 368
Query: 627 GKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGH 686
G+ P EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+
Sbjct: 369 GESDPAEIIASVKRGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGN 428
Query: 687 GPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
GP + KVSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 429 GPEAMSKVSMVGNDLSLDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|422300006|ref|ZP_16387549.1| tldD protein [Pseudomonas avellanae BPIC 631]
gi|407987925|gb|EKG30596.1| tldD protein [Pseudomonas avellanae BPIC 631]
Length = 479
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 263/471 (55%), Positives = 348/471 (73%), Gaps = 5/471 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L L +LG + +D AD YFQ +E+W LE+GIVK G F+++QGVGVR
Sbjct: 11 LLAPGGLTLDSLQSVLGELAGPGIDAADLYFQGMISESWSLEDGIVKEGIFNLDQGVGVR 70
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
A SG+KT F YS+ I+++ L A ++ RSI+ NG+++ + + LY+ + +
Sbjct: 71 AQSGEKTGFAYSNAITEDALRTAARAARSISRAGQNGRVQAFTSQD---VAQLYAPDNPL 127
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
++ EK++LL+R++ R D R+ +V +++G ++ IL+ DG + AD+RPLV+
Sbjct: 128 EVLSRAEKVELLKRIDVATRALDSRIQQVSVSMAGVWERILVAAADGSLAADVRPLVRFN 187
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKV 506
V++IVE+NGRRE G G GGR +Y YF TD ++ AL+NLEA PAPAG + V
Sbjct: 188 VSVIVEQNGRRERGGHGGGGRTDYRYFLTDDRAMGYAREALRQALVNLEAIPAPAGTLPV 247
Query: 507 VLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSIN 566
VLG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+G LA RRGS++
Sbjct: 248 VLGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGALAGRRGSLS 307
Query: 567 IDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLN 626
+DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML
Sbjct: 308 VDDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYMLA 367
Query: 627 GKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGH 686
G+ P+EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+
Sbjct: 368 GQSDPQEIIASVKRGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGN 427
Query: 687 GPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
GP + +VSM+GND+ LD GVG CGKDGQ +PVGVGQPTLKID+ITVGGT
Sbjct: 428 GPEAMSRVSMVGNDLSLDSGVGTCGKDGQSLPVGVGQPTLKIDAITVGGTG 478
>gi|399003706|ref|ZP_10706361.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM18]
gi|398122086|gb|EJM11692.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM18]
Length = 480
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 259/470 (55%), Positives = 342/470 (72%), Gaps = 3/470 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P + + L +LG++ +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGVTIESLQGVLGDLAGPGIDAADLYFQGQISESWALEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ L + + + G+ ++ + LY + +
Sbjct: 72 AQSGEKTGFAYSNAITLEAL--GAAARAARSISRAGQNGTVQAFTTQDVAQLYGPDNPLE 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
+ EK++LL+R++ R DPR+ +V +++G ++ ILI DG + AD+RPLV+ V
Sbjct: 130 VMTRAEKVELLKRIDVATRALDPRIQQVTVSMAGVWERILIASTDGGLAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
++IVE+NGRRE G G GGR +Y YF ++ ++ AL+NLEA PAPAG + VV
Sbjct: 190 SVIVEQNGRRERGGHGGGGRTDYRYFLSEDRAMGYAREALRQALVNLEAIPAPAGTLPVV 249
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+GTLA RRGS+++
Sbjct: 250 LGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGTLAGRRGSLSV 309
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML G
Sbjct: 310 DDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYMLGG 369
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ P EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+G
Sbjct: 370 ESDPAEIIASVKKGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGNG 429
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
P + +VSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 430 PEAMSRVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|386019615|ref|YP_005937639.1| C69 family peptidase [Pseudomonas stutzeri DSM 4166]
gi|327479587|gb|AEA82897.1| peptidase U62, modulator of DNA gyrase [Pseudomonas stutzeri DSM
4166]
Length = 480
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 261/447 (58%), Positives = 338/447 (75%), Gaps = 3/447 (0%)
Query: 292 VDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINA 351
VD AD YFQ +E+W+LE+GIVK G F + QGVGVRA+SG+KT F YS+ I+ + L A
Sbjct: 35 VDAADLYFQDQVSESWVLEDGIVKEGGFHLEQGVGVRALSGEKTGFAYSNAITADALRQA 94
Query: 352 VKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDP 411
++ RSIA +G+ +K + + LY + + ++ EK+ LL+R++ R DP
Sbjct: 95 AQAARSIAR--SGQQGQVKVLGRAAFAPLYHQDNPLDGLSRAEKVDLLKRIDVATRALDP 152
Query: 412 RVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNY 471
R+ +V +L+G ++ IL+ DG + ADIRPLV+ V++IVE+NGRRE G G GGR Y
Sbjct: 153 RIKQVTVSLAGVWEHILVAAMDGGLAADIRPLVRFNVSVIVEQNGRRERGGQGGGGRTGY 212
Query: 472 NYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFN 530
YF ++ ++ AL+NLEA PAPAG + VVLGPGW G+LLHEA+GHGLEGDFN
Sbjct: 213 QYFLSEDRAMGYAREALRQALVNLEAVPAPAGSLPVVLGPGWSGVLLHEAVGHGLEGDFN 272
Query: 531 RKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQ 590
RKGSSA+S I +++ASK TIVD+GTLA+RRGS+++DDEG PTQCTTLIENGILKGY+Q
Sbjct: 273 RKGSSAYSGRIDQQVASKLCTIVDDGTLADRRGSLSVDDEGTPTQCTTLIENGILKGYIQ 332
Query: 591 DIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGG 650
D +NARLM ++ TGN RRES+AH+P+PRMTNTYML G+ PEEII SVK G+Y + GG
Sbjct: 333 DKLNARLMGVAPTGNGRRESYAHLPMPRMTNTYMLAGESDPEEIIRSVKKGIYCASLGGG 392
Query: 651 QVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVC 710
QVDIT+GKFVFS S+AY++++G+IT PVKGATLIG+GP ++ +VSM+GND+ LD GVG C
Sbjct: 393 QVDITSGKFVFSTSEAYLVEDGRITAPVKGATLIGNGPEVMNRVSMVGNDLALDSGVGTC 452
Query: 711 GKDGQMVPVGVGQPTLKIDSITVGGTN 737
GKDGQ VPVGVGQPTLKID ITVGGT
Sbjct: 453 GKDGQSVPVGVGQPTLKIDEITVGGTG 479
>gi|336312957|ref|ZP_08567902.1| TldD protein, part of proposed TldE/TldD proteolytic complex
[Shewanella sp. HN-41]
gi|335863569|gb|EGM68713.1| TldD protein, part of proposed TldE/TldD proteolytic complex
[Shewanella sp. HN-41]
Length = 482
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 260/456 (57%), Positives = 347/456 (76%), Gaps = 8/456 (1%)
Query: 287 MFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKN 346
+ ++K+D++D YFQ +++E+W+LE+GI+K G+F I +GVGVRAISG+KT F Y+DDI+
Sbjct: 28 IHQHKIDFSDLYFQGSRHESWVLEDGIIKDGSFHIERGVGVRAISGEKTGFAYADDITPA 87
Query: 347 TLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIA 406
L A ++ R IA S G+ ++ K+ K+ +LY D I+++ +KI LL+ +
Sbjct: 88 ALSAAAEAARGIA--SLGEQTQVQAFKRQKVLALYDSLDPIAAMEEVKKINLLKEADAFI 145
Query: 407 RLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCG 466
R D R+I+V+ +L+G ++ IL+ +DG + ADIRPLV+ ++I+E+NG+RE G +G G
Sbjct: 146 RSLDSRIIQVVVSLAGVHEEILVAASDGTLAADIRPLVRFNCSVILEENGKRERGGAGGG 205
Query: 467 GRYNYNYF---TDMILEKCVS---NSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEA 520
GR++Y D L C + +V A +NL A APAG M VVLG GWPG+LLHEA
Sbjct: 206 GRHDYGVLMASDDTGLPMCFAFAREAVRQAQVNLNAIDAPAGEMPVVLGNGWPGVLLHEA 265
Query: 521 IGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLI 580
+GHGLEGDFNRKGSSAFS IG+++ASK +T+VD+GTLANRRGS++IDDEG TQ T LI
Sbjct: 266 VGHGLEGDFNRKGSSAFSGMIGQQVASKLVTVVDDGTLANRRGSLSIDDEGVQTQRTVLI 325
Query: 581 ENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKN 640
E+GILKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYM G+ P EII SVK
Sbjct: 326 EDGILKGYMQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNTYMTAGQSDPSEIIKSVKK 385
Query: 641 GLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGND 700
G+YA NF GGQVDIT+GKFVFSAS+AY+I+NG++T +KGATLIG+GP + ++SM+GND
Sbjct: 386 GIYAPNFGGGQVDITSGKFVFSASEAYLIENGEVTQAIKGATLIGNGPEAMGQISMVGND 445
Query: 701 MKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
M LD GVGVCGKDGQ VPVGVGQPTLK+D +TVGGT
Sbjct: 446 MALDKGVGVCGKDGQSVPVGVGQPTLKLDKLTVGGT 481
>gi|260912972|ref|ZP_05919457.1| U62 family peptidase 2 TldD [Pasteurella dagmatis ATCC 43325]
gi|260632962|gb|EEX51128.1| U62 family peptidase 2 TldD [Pasteurella dagmatis ATCC 43325]
Length = 482
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 251/481 (52%), Positives = 341/481 (70%), Gaps = 5/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N + LL P +L K L + +DYAD YFQ +++ENW+LE+ I+K G F I
Sbjct: 2 INTVSNTLLTPSNLSLKDLQNTFDLLSHRHIDYADLYFQLSQDENWVLEDSIIKEGGFHI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVGVRA+SG+KT F YSD I+ +L + + IA G I + ++ Y
Sbjct: 62 DRGVGVRAVSGEKTGFAYSDQINLASLQQCAAAVKGIAQVKQGNIIAPSVLTPVEAMLRY 121
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ ++S+N +KI LL V+K AR +D RV++V A+LS Y+ +LI DG + ADIR
Sbjct: 122 QSINPLNSLNKEKKIALLHLVDKTARNEDSRVVQVSASLSSVYEEVLIVATDGTLAADIR 181
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L ++++VE++G+RE G++G GGR+ +F ++ +V AL+NL A
Sbjct: 182 PLVRLSISVLVEQDGKRERGSAGAGGRFGLEWFLESENGEIRAVYFAKEAVRQALVNLSA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS F+ IG+ + S TIVD+G
Sbjct: 242 IAAPAGMMPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSLFTGKIGELVTSPLCTIVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL NRRGSI +DDEG P+Q LI++GIL+GYMQD MNARLM ++ TGN RRES+AH+P+
Sbjct: 302 TLQNRRGSITVDDEGVPSQYNVLIKDGILQGYMQDKMNARLMGVAPTGNGRRESYAHLPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ +++I+SV GL+A +F GGQVDIT+GKFVFS+S+AY+I+ GKIT
Sbjct: 362 PRMTNTYMLAGQSKFDDLIASVDFGLFAPHFGGGQVDITSGKFVFSSSEAYLIEKGKITK 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G +++ VSM+ + ++LD G+GVCGK+GQ VPVGVGQP LKI+ ITVGGT
Sbjct: 422 PVKGATLIGSGIEVMQNVSMVADQVELDHGIGVCGKEGQSVPVGVGQPALKIEQITVGGT 481
Query: 737 N 737
N
Sbjct: 482 N 482
>gi|77457072|ref|YP_346577.1| microcin-processing peptidase 2 [Pseudomonas fluorescens Pf0-1]
gi|77381075|gb|ABA72588.1| putative modulation of DNA gyrase-related protein [Pseudomonas
fluorescens Pf0-1]
Length = 480
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 257/472 (54%), Positives = 346/472 (73%), Gaps = 7/472 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P + + L +LG++ +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGVTIESLQGVLGDLAGPGIDAADLYFQGQISESWSLEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ L + + + G+ ++ + LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAITLEAL--GAAARAARSISRAGQNGTVQAFSSQDVAQLYAPDNPLE 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ EK++LL+R++ R DPR+ +V +++G ++ IL+ DG + AD+RPLV+ V
Sbjct: 130 VLSRAEKVELLKRIDVATRALDPRIQQVSVSMAGVWERILVASTDGGLAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVS---NSVNSALINLEAKPAPAGIMK 505
++IVE+NGRRE G G GGR +Y YF + ++ + ++ AL+NLEA PAPAG +
Sbjct: 190 SVIVEQNGRRERGGHGGGGRTDYRYF--LAEDRAMGYAREALRQALVNLEAIPAPAGTLP 247
Query: 506 VVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSI 565
VVLG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+GTL+ RRGS+
Sbjct: 248 VVLGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGTLSGRRGSL 307
Query: 566 NIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYML 625
++DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML
Sbjct: 308 SVDDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYML 367
Query: 626 NGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIG 685
G+ P EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG
Sbjct: 368 GGQSDPAEIIASVKKGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIG 427
Query: 686 HGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
+GP + +VSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 428 NGPEAMSRVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|398976060|ref|ZP_10686022.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM25]
gi|398139612|gb|EJM28607.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM25]
Length = 480
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 257/472 (54%), Positives = 346/472 (73%), Gaps = 7/472 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P + + L +LG++ +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGVTIESLQGVLGDLAGPGIDAADLYFQGQISESWSLEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ L + + + G+ ++ + LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAITLEAL--GAAARAARSISRAGQNGTVQAFSTQDVAQLYAPDNPLE 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ EK++LL+R++ R DPR+ +V +++G ++ IL+ DG + AD+RPLV+ V
Sbjct: 130 VLSRAEKVELLKRIDVATRALDPRIQQVSVSMAGVWERILVASTDGGLAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVS---NSVNSALINLEAKPAPAGIMK 505
++IVE+NGRRE G G GGR +Y YF + ++ + ++ AL+NLEA PAPAG +
Sbjct: 190 SVIVEQNGRRERGGHGGGGRTDYRYF--LAEDRAMGYAREALRQALVNLEAIPAPAGTLP 247
Query: 506 VVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSI 565
VVLG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+GTL+ RRGS+
Sbjct: 248 VVLGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGTLSGRRGSL 307
Query: 566 NIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYML 625
++DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML
Sbjct: 308 SVDDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYML 367
Query: 626 NGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIG 685
G+ P EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG
Sbjct: 368 GGQSDPAEIIASVKKGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIG 427
Query: 686 HGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
+GP + +VSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 428 NGPEAMSRVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|398961828|ref|ZP_10678945.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM30]
gi|398151901|gb|EJM40435.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM30]
Length = 480
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 257/472 (54%), Positives = 346/472 (73%), Gaps = 7/472 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P + + L +LG++ +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGVTIESLQGVLGDLAGPGIDAADLYFQGQISESWSLEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ L + + + G+ ++ + LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAITLEAL--GAAARAARSISRAGQNGTVQAFSTQDVAQLYAPDNPLE 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ EK++LL+R++ R DPR+ +V +++G ++ IL+ DG + AD+RPLV+ V
Sbjct: 130 VLSRAEKVELLKRIDVATRALDPRIQQVSVSMAGVWERILVASTDGGLAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVS---NSVNSALINLEAKPAPAGIMK 505
++IVE+NGRRE G G GGR +Y YF + ++ + ++ AL+NLEA PAPAG +
Sbjct: 190 SVIVEQNGRRERGGHGGGGRTDYRYF--LAEDRAMGYAREALRQALVNLEAIPAPAGTLP 247
Query: 506 VVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSI 565
VVLG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+GTL+ RRGS+
Sbjct: 248 VVLGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGTLSGRRGSL 307
Query: 566 NIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYML 625
++DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML
Sbjct: 308 SVDDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYML 367
Query: 626 NGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIG 685
G+ P EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG
Sbjct: 368 GGESDPAEIIASVKKGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIG 427
Query: 686 HGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
+GP + +VSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 428 NGPEAMSRVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|398986909|ref|ZP_10691765.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM24]
gi|399014486|ref|ZP_10716777.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM16]
gi|398111051|gb|EJM00943.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM16]
gi|398151482|gb|EJM40030.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM24]
Length = 480
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 257/472 (54%), Positives = 345/472 (73%), Gaps = 7/472 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P + + L +LG++ +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGVTIESLQGVLGDLAGPGIDAADLYFQGQISESWALEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ L + + + G+ ++ + LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAITLEAL--GAAARAARSISRAGQNGTVQAFTTQDVAQLYAPDNPLE 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
+ EK++LL+R++ R DPR+ +V +++G ++ IL+ DG + AD+RPLV+ V
Sbjct: 130 VLTRAEKVELLKRIDVATRALDPRIQQVSVSMAGVWERILVASTDGGLAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVS---NSVNSALINLEAKPAPAGIMK 505
++IVE+NGRRE G G GGR +Y YF + ++ + ++ AL+NLEA PAPAG +
Sbjct: 190 SVIVEQNGRRERGGHGGGGRTDYRYF--LAEDRAMGYAREALRQALVNLEAIPAPAGTLP 247
Query: 506 VVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSI 565
VVLG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+GTL+ RRGS+
Sbjct: 248 VVLGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGTLSGRRGSL 307
Query: 566 NIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYML 625
++DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML
Sbjct: 308 SVDDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYML 367
Query: 626 NGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIG 685
G+ P EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG
Sbjct: 368 GGESDPAEIIASVKKGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIG 427
Query: 686 HGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
+GP + +VSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 428 NGPEAMSRVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|152999054|ref|YP_001364735.1| peptidase U62 modulator of DNA gyrase [Shewanella baltica OS185]
gi|217971735|ref|YP_002356486.1| peptidase U62 modulator of DNA gyrase [Shewanella baltica OS223]
gi|373951107|ref|ZP_09611068.1| peptidase U62 modulator of DNA gyrase [Shewanella baltica OS183]
gi|386323074|ref|YP_006019191.1| peptidase U62 modulator of DNA gyrase [Shewanella baltica BA175]
gi|151363672|gb|ABS06672.1| peptidase U62 modulator of DNA gyrase [Shewanella baltica OS185]
gi|217496870|gb|ACK45063.1| peptidase U62 modulator of DNA gyrase [Shewanella baltica OS223]
gi|333817219|gb|AEG09885.1| peptidase U62 modulator of DNA gyrase [Shewanella baltica BA175]
gi|373887707|gb|EHQ16599.1| peptidase U62 modulator of DNA gyrase [Shewanella baltica OS183]
Length = 482
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 262/463 (56%), Positives = 347/463 (74%), Gaps = 8/463 (1%)
Query: 280 LLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFY 339
L L + ++K+DY+D YFQ +++E+W+LE+GI+K G+F I +GVGVRAISG+KT F Y
Sbjct: 21 LQTYLNTIHQHKIDYSDLYFQGSRHESWVLEDGIIKDGSFHIERGVGVRAISGEKTGFAY 80
Query: 340 SDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLL 399
+DDI+ L A ++ R IA S G+ ++ K+ K +LY D I+++ +KI LL
Sbjct: 81 ADDITPAALSAAAQAARGIA--SAGEQTQVQAFKRQKALALYDSLDPIAAMEEVKKINLL 138
Query: 400 ERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRRE 459
+ + R D R+I+V+ +L+G ++ ILI +DG + ADIRPLV+ ++I+E+NG+RE
Sbjct: 139 KEADAFIRSLDSRIIQVVVSLAGVHEEILIAASDGTLAADIRPLVRFNCSVILEENGKRE 198
Query: 460 IGNSGCGGRYNYNYF---TDMILEKCVS---NSVNSALINLEAKPAPAGIMKVVLGPGWP 513
G +G GGR++Y D L C + +V A +NL A APAG M VVLG GWP
Sbjct: 199 RGGAGGGGRHDYGVLMASDDTGLPMCFAFAREAVRQAQVNLNAIDAPAGEMPVVLGNGWP 258
Query: 514 GILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNP 573
G+LLHEA+GHGLEGDFNRKGSSAFS +G+ +ASK +T+VD+GTL NRRGS++IDDEG P
Sbjct: 259 GVLLHEAVGHGLEGDFNRKGSSAFSGKMGQLVASKLVTVVDDGTLPNRRGSLSIDDEGVP 318
Query: 574 TQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEE 633
TQ T LIE+GILKGY+QD +NARLM ++ TGN RRES+AH+P+PRMTNTYM G+ P E
Sbjct: 319 TQRTVLIEDGILKGYIQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNTYMTAGESDPSE 378
Query: 634 IISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKK 693
II SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NG++T +KGATLIG+GP + +
Sbjct: 379 IIKSVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIENGEVTQAIKGATLIGNGPEAMSQ 438
Query: 694 VSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
+SM+GNDM LD GVGVCGKDGQ VPVGVGQPTLK+D +TVGGT
Sbjct: 439 ISMVGNDMALDQGVGVCGKDGQSVPVGVGQPTLKLDRLTVGGT 481
>gi|126176006|ref|YP_001052155.1| peptidase U62 modulator of DNA gyrase [Shewanella baltica OS155]
gi|386342762|ref|YP_006039128.1| peptidase U62 modulator of DNA gyrase [Shewanella baltica OS117]
gi|125999211|gb|ABN63286.1| microcin-processing peptidase 2. Unknown type peptidase. MEROPS
family U62 [Shewanella baltica OS155]
gi|334865163|gb|AEH15634.1| peptidase U62 modulator of DNA gyrase [Shewanella baltica OS117]
Length = 482
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 262/463 (56%), Positives = 346/463 (74%), Gaps = 8/463 (1%)
Query: 280 LLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFY 339
L L + ++K+DY+D YFQ +++E+W+LE+GI+K G+F I +GVGVRAISG+KT F Y
Sbjct: 21 LQTYLNTIHQHKIDYSDLYFQGSRHESWVLEDGIIKDGSFHIERGVGVRAISGEKTGFAY 80
Query: 340 SDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLL 399
+DDI+ L A + R IA S G+ ++ K+ K +LY D I+++ +KI LL
Sbjct: 81 ADDITPAALSAAAHAARGIA--SAGEQTQVQAFKRQKALALYDSLDPIAAMEEVKKINLL 138
Query: 400 ERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRRE 459
+ + R D R+I+V+ +L+G ++ ILI +DG + ADIRPLV+ ++I+E+NG+RE
Sbjct: 139 KEADAFIRSLDSRIIQVVVSLAGVHEEILIAASDGTLAADIRPLVRFNCSVILEENGKRE 198
Query: 460 IGNSGCGGRYNYNYF---TDMILEKCVS---NSVNSALINLEAKPAPAGIMKVVLGPGWP 513
G +G GGR++Y D L C + +V A +NL A APAG M VVLG GWP
Sbjct: 199 RGGAGGGGRHDYGVLMASDDTGLPMCFAFAREAVRQAQVNLNAIDAPAGEMPVVLGNGWP 258
Query: 514 GILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNP 573
G+LLHEA+GHGLEGDFNRKGSSAFS +G+ +ASK +T+VD+GTL NRRGS++IDDEG P
Sbjct: 259 GVLLHEAVGHGLEGDFNRKGSSAFSGKMGQLVASKLVTVVDDGTLPNRRGSLSIDDEGVP 318
Query: 574 TQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEE 633
TQ T LIE+GILKGY+QD +NARLM ++ TGN RRES+AH+P+PRMTNTYM G+ P E
Sbjct: 319 TQRTVLIEDGILKGYIQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNTYMTAGESDPSE 378
Query: 634 IISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKK 693
II SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NG++T +KGATLIG+GP + +
Sbjct: 379 IIKSVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIENGEVTQAIKGATLIGNGPEAMSQ 438
Query: 694 VSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
+SM+GNDM LD GVGVCGKDGQ VPVGVGQPTLK+D +TVGGT
Sbjct: 439 ISMVGNDMALDQGVGVCGKDGQSVPVGVGQPTLKLDRLTVGGT 481
>gi|212554887|gb|ACJ27341.1| Peptidase U62, modulator of DNA gyrase [Shewanella piezotolerans
WP3]
Length = 482
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 260/481 (54%), Positives = 353/481 (73%), Gaps = 12/481 (2%)
Query: 263 NIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSIN 322
+ +S+L + +D+ L L + ++K+D++D YFQ +++E+W+LE+GIVK G+F I
Sbjct: 6 QVGQSLLQDGLAIDD--LQSYLKRIHEHKIDFSDLYFQGSRHESWVLEDGIVKDGSFHIE 63
Query: 323 QGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA-NQSNGKIKIIKNIKKIKINSLY 381
+GVGVRAI+G+KT F Y+D+I+ L A + R IA + +GK+ K +LY
Sbjct: 64 RGVGVRAITGEKTGFAYADEINPAALDAAATAARGIAISGGSGKVNAWKQQHD---KALY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+D I+++ +KI LL+ + R D R+I+V+ +LSG ++ IL+ +DG + ADIR
Sbjct: 121 LSSDPIAAMEEVKKIALLKEADAYIRSLDERIIQVVVSLSGVHEEILVAASDGTLAADIR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF---TDMILEKCVS---NSVNSALINLE 495
PLV+ ++I+++ +RE G SG GGR++Y+ D L C + +V A +NL+
Sbjct: 181 PLVRFNCSVILQEGDKRERGGSGGGGRHSYDVLLADGDDGLPYCFAFAREAVRQAQVNLQ 240
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSSAFS +G+++ASK +T+VD+
Sbjct: 241 AIDAPAGEMPVVLGAGWPGVLLHEAVGHGLEGDFNRKGSSAFSGKVGQQVASKLVTVVDD 300
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+A+RRGS++IDDEG PTQ T LIE+GILKGYMQD +NA LM TGN RRES+AH+P
Sbjct: 301 GTIADRRGSLSIDDEGTPTQKTVLIEDGILKGYMQDKLNAGLMGERSTGNGRRESYAHLP 360
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYM G P EII SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NG+IT
Sbjct: 361 MPRMTNTYMEAGDSDPAEIIKSVKKGVYAPNFGGGQVDITSGKFVFSASEAYLIENGEIT 420
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
P+KGATLIG+GP + ++SM+GND+ LD GVGVCGKDGQ VPVGVGQPTLK+D +TVGG
Sbjct: 421 QPIKGATLIGNGPESMGQISMVGNDLALDKGVGVCGKDGQSVPVGVGQPTLKLDKLTVGG 480
Query: 736 T 736
T
Sbjct: 481 T 481
>gi|160873647|ref|YP_001552963.1| peptidase U62 modulator of DNA gyrase [Shewanella baltica OS195]
gi|378706887|ref|YP_005271781.1| peptidase U62 modulator of DNA gyrase [Shewanella baltica OS678]
gi|418025677|ref|ZP_12664654.1| peptidase U62 modulator of DNA gyrase [Shewanella baltica OS625]
gi|160859169|gb|ABX47703.1| peptidase U62 modulator of DNA gyrase [Shewanella baltica OS195]
gi|315265876|gb|ADT92729.1| peptidase U62 modulator of DNA gyrase [Shewanella baltica OS678]
gi|353534938|gb|EHC04503.1| peptidase U62 modulator of DNA gyrase [Shewanella baltica OS625]
Length = 482
Score = 510 bits (1313), Expect = e-141, Method: Compositional matrix adjust.
Identities = 262/463 (56%), Positives = 346/463 (74%), Gaps = 8/463 (1%)
Query: 280 LLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFY 339
L L + ++K+DY+D YFQ +++E+W+LE+GI+K G+F I +GVGVRAISG+KT F Y
Sbjct: 21 LQTYLNTIHQHKIDYSDLYFQGSRHESWVLEDGIIKDGSFHIERGVGVRAISGEKTGFAY 80
Query: 340 SDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLL 399
+DDI+ L A ++ R IA S G+ ++ K+ K +LY D I+++ +KI LL
Sbjct: 81 ADDITPAALSAAAQAARGIA--SAGEQTQVQAFKRQKALALYDSLDPIAAMEEVKKINLL 138
Query: 400 ERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRRE 459
+ + R D R+I+V+ +L+G ++ ILI +DG + ADIRPLV+ ++I+E+NG+RE
Sbjct: 139 KEADAFIRSLDSRIIQVVVSLAGVHEEILIAASDGTLAADIRPLVRFNCSVILEENGKRE 198
Query: 460 IGNSGCGGRYNYNYF---TDMILEKCVS---NSVNSALINLEAKPAPAGIMKVVLGPGWP 513
G +G GGR++Y D L C + +V A +NL A APAG M VVLG GWP
Sbjct: 199 RGGAGGGGRHDYGVLMASDDTGLPMCFAFAREAVRQAQVNLNAIDAPAGEMPVVLGNGWP 258
Query: 514 GILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNP 573
G+LLHEA+GHGLEGDFNRKGSSAFS +G+ +ASK T+VD+GTL NRRGS++IDDEG P
Sbjct: 259 GVLLHEAVGHGLEGDFNRKGSSAFSGKMGQLVASKLATVVDDGTLPNRRGSLSIDDEGVP 318
Query: 574 TQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEE 633
TQ T LIE+GILKGY+QD +NARLM ++ TGN RRES+AH+P+PRMTNTYM G+ P E
Sbjct: 319 TQRTVLIEDGILKGYIQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNTYMTAGESDPSE 378
Query: 634 IISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKK 693
II SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NG++T +KGATLIG+GP + +
Sbjct: 379 IIKSVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIENGEVTQAIKGATLIGNGPEAMSQ 438
Query: 694 VSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
+SM+GNDM LD GVGVCGKDGQ VPVGVGQPTLK+D +TVGGT
Sbjct: 439 ISMVGNDMALDQGVGVCGKDGQSVPVGVGQPTLKLDRLTVGGT 481
>gi|336317050|ref|ZP_08571928.1| Putative Zn-dependent protease-like protein [Rheinheimera sp. A13L]
gi|335878702|gb|EGM76623.1| Putative Zn-dependent protease-like protein [Rheinheimera sp. A13L]
Length = 479
Score = 510 bits (1313), Expect = e-141, Method: Compositional matrix adjust.
Identities = 263/474 (55%), Positives = 347/474 (73%), Gaps = 9/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL DL L + LG +F +K+DYAD YFQ + +E+W LE+G+VK G+F+I +GVGVR
Sbjct: 8 LLSASDLSASDLQQSLGFLFAHKLDYADLYFQSSVHESWGLEDGLVKDGSFNIERGVGVR 67
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
AISG+KT F Y+D IS L A ++ R IA G +++ K + +I Y + +
Sbjct: 68 AISGEKTGFAYADSISAAALKQAAEAARGIAGAGKQGSVQVFKQQSQPQI---YLPCEPL 124
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S++ K++LL+++E R D R +V +LSG Y+ +L+ +DG DIRPLV+L
Sbjct: 125 QSLDNTAKVELLKQMEVYIRSLDSRAEQVAVSLSGVYEEVLVAASDGTFATDIRPLVRLN 184
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLEAKPAPAG 502
+++++ NGRRE G SG G R +Y YF + + + +V A +NL A APAG
Sbjct: 185 CSVLLQHNGRRERGGSGGGARTDYQYFFEDVNGSPRWQGYAREAVRMAQVNLTAVDAPAG 244
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS F+ +G+++ASK TIVD+GTLA+RR
Sbjct: 245 TMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSTFAGRVGEQVASKHCTIVDDGTLAHRR 304
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+NIDDEG +Q LIENGILKGY+QD NA LMN++ TGN RRESFAH+P+PRMTNT
Sbjct: 305 GSLNIDDEGTASQYNVLIENGILKGYIQDKHNAMLMNVAPTGNGRRESFAHLPMPRMTNT 364
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML G++ P+EII SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I++GKIT P+KGAT
Sbjct: 365 YMLAGEYDPQEIIGSVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIEDGKITTPIKGAT 424
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
LIG+GP +++VSM+GND+ LD GVGVCGK GQ +PVGVGQPTLK+D++TVGGT
Sbjct: 425 LIGNGPEAMQQVSMVGNDLALDAGVGVCGKQGQSLPVGVGQPTLKLDAMTVGGT 478
>gi|417852933|ref|ZP_12498380.1| hypothetical protein GEW_02203 [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
gi|338215841|gb|EGP02066.1| hypothetical protein GEW_02203 [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
Length = 482
Score = 510 bits (1313), Expect = e-141, Method: Compositional matrix adjust.
Identities = 255/499 (51%), Positives = 349/499 (69%), Gaps = 22/499 (4%)
Query: 244 IINQVKNCILISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTK 303
+IN V N +L P N+ + L FDL + ++DYAD YFQ ++
Sbjct: 1 MINTVSNTLLT------PSNLTLNDLQNTFDL-----------LSHRQIDYADLYFQLSQ 43
Query: 304 NENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSN 363
+EN +LE+GI+K G F I++GVGVRA+SG+KT F YSD I ++ + + IA
Sbjct: 44 DENCVLEDGIIKEGGFHIDRGVGVRAVSGEKTGFAYSDQIDLVSIQQCADAVKGIAQSKQ 103
Query: 364 GKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGE 423
G + + ++ Y + ++S++ +KI LL V+KIAR +DPRV +V A+LS
Sbjct: 104 GNRIVPQGFHQVDPILRYQAINPLNSLSKEKKIALLYLVDKIARAEDPRVTRVSASLSAV 163
Query: 424 YDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF--TDMILEK 481
Y+ +LI DG + ADIRPLV+L ++++VE++G+RE G++G GGR+ ++F T+ +
Sbjct: 164 YEEVLIVATDGTLAADIRPLVRLSISVLVEQDGKRERGSAGAGGRFGLDWFLATESGEVR 223
Query: 482 CV---SNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFS 538
V +V AL+NL A APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS F+
Sbjct: 224 AVYFAKEAVRQALVNLSAIAAPAGMMPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSLFT 283
Query: 539 NCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLM 598
IG+ + S TIVD+GTL +RRGSI +DDEG P Q LI++GIL+GYMQD MNARLM
Sbjct: 284 GKIGELVTSPLCTIVDDGTLQDRRGSITVDDEGVPGQYNVLIKDGILQGYMQDKMNARLM 343
Query: 599 NMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGK 658
++ TGN RRES+AH+P+PRMTNTYML G+ +++I+SV G++A +F GGQVDIT+GK
Sbjct: 344 GVAPTGNGRRESYAHLPMPRMTNTYMLAGQSQFDDLIASVDRGIFAPHFGGGQVDITSGK 403
Query: 659 FVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVP 718
FVFS S+AY+I+NGKIT PVKGATLIG G +++ +SM+ + +++D GVGVCGK+GQ VP
Sbjct: 404 FVFSTSEAYLIENGKITKPVKGATLIGSGIEVMQNISMVADKVEIDHGVGVCGKEGQSVP 463
Query: 719 VGVGQPTLKIDSITVGGTN 737
VGVGQP LKID ITVGGTN
Sbjct: 464 VGVGQPALKIDKITVGGTN 482
>gi|427800697|ref|ZP_18968413.1| protease TldD [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm5]
gi|414063139|gb|EKT44324.1| protease TldD [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm5]
Length = 540
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 255/470 (54%), Positives = 345/470 (73%), Gaps = 7/470 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L+ + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLNHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QGVGVRAISG+KT F Y+D IS L + ++ R+I + NG+ K+ K + + LY
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRE-NGEGKV-KTLAAVAHQPLY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ D + S++ EK+ +L RV+K AR D RV +V A+L+G Y++IL+ DG + AD+R
Sbjct: 121 TTLDPLQSMSREEKLDILRRVDKAAREADKRVQEVNASLTGVYELILVAATDGTLAADVR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L V++ VE++G+RE G SG GGR+ Y YF ++ + +V AL+NL A
Sbjct: 181 PLVRLSVSVQVEEDGKRERGASGGGGRFGYEYFLADLDGEVRADAWAKEAVRMALVNLSA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG+++AS T+VD+G
Sbjct: 241 VAAPAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQIGEQVASALCTVVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS+ IDDEG P Q LIENG+LKGYMQD +NARLM + TGN RRES+AH+P+
Sbjct: 301 TMMNRRGSVAIDDEGTPGQYNVLIENGVLKGYMQDKLNARLMGAAPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 361 PRMTNTYMLAGQSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTT 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTL 726
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQP L
Sbjct: 421 PVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPRL 470
>gi|406979582|gb|EKE01338.1| hypothetical protein ACD_21C00156G0005 [uncultured bacterium]
Length = 482
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 254/478 (53%), Positives = 339/478 (70%), Gaps = 5/478 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
IA+ +LLEP L E+ L ++L VD AD Y Q++++E+W LEEG+VK G+FSI
Sbjct: 5 FEIAKKLLLEPTGLTEQHLHQVLVKTLGPGVDDADIYLQYSQSESWALEEGLVKKGSFSI 64
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSN-GKIKIIKNIKKIKINSL 380
+QGVGVRAISGDKT F Y+DD+ + A R IA+ G +++ + + + L
Sbjct: 65 DQGVGVRAISGDKTGFAYADDLLMPAMEEAAFYARRIADAGQTGYMQVWQRAQPQQ--QL 122
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y + ++++ EK+ LL+ V+ AR DPRV++V L+G Y+V+L+ DG +VAD+
Sbjct: 123 YPQINPLATLTEDEKVALLKEVDVEARKCDPRVVQVNVELAGSYNVMLVGTMDGNLVADV 182
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVS-NSVNSALINLEAKPA 499
RPLV+L V+++VE+ GR+E G+ G GGR Y F L K + +V AL+NL A PA
Sbjct: 183 RPLVRLNVSVLVEEKGRKEHGSYGGGGRTTYEMFLQNSLAKQYAREAVRIALVNLSAIPA 242
Query: 500 PAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL- 558
PAG+M VVLG GWP ++LHEA+GHGLE DFNRK S +S IG+++AS ++++D G +
Sbjct: 243 PAGLMPVVLGSGWPAVMLHEAVGHGLEADFNRKEQSVYSGKIGEKVASPLVSVIDQGNIP 302
Query: 559 ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPR 618
NRRGS+N+DDEG TQ T LIENGIL+ YM D +NARLM+ TGN RR S+A IPIPR
Sbjct: 303 GNRRGSLNVDDEGTLTQRTVLIENGILRNYMYDKLNARLMHTKSTGNGRRSSYAQIPIPR 362
Query: 619 MTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPV 678
MTNT+ML G P+EII+SV G+YA NFSGGQVDIT+G+FVFS S+AY+I+ G IT P+
Sbjct: 363 MTNTFMLAGNHDPQEIIASVDRGVYAVNFSGGQVDITSGEFVFSTSEAYLIEKGNITAPL 422
Query: 679 KGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
KG TLIG+GP +L K+ M+GND+K D GVG CGK+GQ V VGVGQPTLKI +TVGGT
Sbjct: 423 KGVTLIGNGPAVLNKIVMVGNDLKFDNGVGACGKNGQSVAVGVGQPTLKISELTVGGT 480
>gi|398853750|ref|ZP_10610345.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM80]
gi|398238830|gb|EJN24552.1| putative Zn-dependent protease-like protein [Pseudomonas sp. GM80]
Length = 480
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 256/472 (54%), Positives = 344/472 (72%), Gaps = 7/472 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P + + L +LG++ +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 12 LLAPGGVTIESLQGVLGDLAGPGIDAADLYFQGQISESWALEDGIVKEGSFNLDQGVGVR 71
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A SG+KT F YS+ I+ L + + + G+ ++ + LY+ + +
Sbjct: 72 AQSGEKTGFAYSNAITLEAL--GAAARAARSISRAGQNGTVQAFTSQDVAQLYAPDNPLE 129
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ EK++LL+ ++ R DPR+ +V +++G ++ IL+ DG + AD+RPLV+ V
Sbjct: 130 VLSRAEKVELLKSIDVATRALDPRIQQVSVSMAGVWERILVASTDGGLAADVRPLVRFNV 189
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVS---NSVNSALINLEAKPAPAGIMK 505
++IVE+NGRRE G G GGR +Y YF + ++ + ++ AL+NLEA PAPAG
Sbjct: 190 SVIVEQNGRRERGGHGGGGRTDYRYF--LAEDRAMGYAREALRQALVNLEAIPAPAGTFP 247
Query: 506 VVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSI 565
VVLG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+GTL+ RRGS+
Sbjct: 248 VVLGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGTLSGRRGSL 307
Query: 566 NIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYML 625
++DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML
Sbjct: 308 SVDDEGTPTECTTLIENGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYML 367
Query: 626 NGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIG 685
G+ P EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG
Sbjct: 368 GGESDPAEIIASVKKGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIG 427
Query: 686 HGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
+GP + +VSM+GND+ LD GVG CGKDGQ VPVGVGQPTLKID+ITVGGT
Sbjct: 428 NGPEAMSRVSMVGNDLALDSGVGTCGKDGQSVPVGVGQPTLKIDAITVGGTG 479
>gi|244539002|dbj|BAH83045.1| predicted peptidase [Candidatus Ishikawaella capsulata Mpkobe]
Length = 487
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 249/462 (53%), Positives = 332/462 (71%), Gaps = 5/462 (1%)
Query: 280 LLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFY 339
L +L + + K+DYAD YFQ + E+W LE+ I+K G++ IN GVG+RAI+G+KT F Y
Sbjct: 25 LYALLEQLTERKLDYADIYFQNSYEESWCLEDNIIKEGSYHINNGVGIRAINGEKTGFAY 84
Query: 340 SDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLL 399
SD I+ N+L +V+ RSI + + + K K +Y+ + + +EKI LL
Sbjct: 85 SDQINLNSLRQSVEVARSIVEEQGVEKPYKLSSSKTKRQPVYNDINPLMDFTAKEKILLL 144
Query: 400 ERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRRE 459
+++ KIAR D RV +V +L Y+ ILI DG AD+RPL++L ++++VE+NG+RE
Sbjct: 145 QQINKIARNADSRVQEVNVHLYACYEPILIAATDGTFAADVRPLIRLSISVLVEENGKRE 204
Query: 460 IGNSGCGGRYNYNYFTD-----MILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPG 514
G+SG G R Y++ D M E +V ALI L A APAG + VVLGPGWPG
Sbjct: 205 SGSSGGGARTGYSFLLDKIHGEMRSEFLAKEAVRIALIKLAATNAPAGAIPVVLGPGWPG 264
Query: 515 ILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPT 574
ILLHEA+GHGLEGDFNR+G+S F+ IG+ +AS+ T++DNG L N RGS+ +DDEG P
Sbjct: 265 ILLHEAVGHGLEGDFNRRGTSVFTGKIGELVASELCTVIDNGLLNNHRGSVAVDDEGVPG 324
Query: 575 QCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEI 634
Q LIE GILK Y+QD +NARLM+M TGN RR+S+AH+P+PRMTNTYML G+ PEEI
Sbjct: 325 QYNILIEQGILKQYLQDKLNARLMDMQTTGNGRRQSYAHLPMPRMTNTYMLPGESTPEEI 384
Query: 635 ISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKV 694
I SV GLYA NFSGGQVDIT+GKFVF S+AY+I+ GKIT PVKGATLIG G +++++
Sbjct: 385 IQSVDFGLYAPNFSGGQVDITSGKFVFCTSEAYLIEKGKITKPVKGATLIGSGIEVMQQI 444
Query: 695 SMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
SM+GND+K+DPG+G+CGK+GQ +PVGVGQPTLK++ ITVGG+
Sbjct: 445 SMVGNDLKIDPGIGICGKEGQNIPVGVGQPTLKLNKITVGGS 486
>gi|291618137|ref|YP_003520879.1| TldD [Pantoea ananatis LMG 20103]
gi|378766445|ref|YP_005194907.1| antibiotic maturation peptidase [Pantoea ananatis LMG 5342]
gi|291153167|gb|ADD77751.1| TldD [Pantoea ananatis LMG 20103]
gi|365185920|emb|CCF08870.1| antibiotic maturation peptidase [Pantoea ananatis LMG 5342]
Length = 485
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 237/472 (50%), Positives = 334/472 (70%), Gaps = 2/472 (0%)
Query: 265 ARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQG 324
A+ LLEP+ L + +L I+G + ++VDYAD Y Q ++E+W +E G+V G+F ++QG
Sbjct: 13 AKQQLLEPYGLSDALLQDIMGRILVHRVDYADLYVQSLRHESWAMENGVVNFGSFDVDQG 72
Query: 325 VGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFT 384
G+RA+ D+TAF YS + L A +S R+IA + + + +K ++
Sbjct: 73 FGLRAVEYDQTAFAYSQHLDLKHLREAARSVRTIAKHCC--LALPEPVKARPESTHIGSR 130
Query: 385 DTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLV 444
D + + EKI LLE++ ++ R DPRVI+V A+L + V + R+D ADIRP++
Sbjct: 131 DPLVAWEAAEKISLLEKINQMTRALDPRVIQVTASLRLSHSVNYVLRHDFYQAADIRPML 190
Query: 445 QLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIM 504
L V++IVE+ G RE +G GGR ++N F D +L++ + V+SALINLEA AP+G M
Sbjct: 191 LLQVSVIVEQRGVRESATTGIGGRGDFNMFNDQVLQQTLRTMVDSALINLEAVAAPSGGM 250
Query: 505 KVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGS 564
VV+ GWPG+LLHEA+GHG EGD+NR G+S ++ IG+R+A + IVD+GTL RRGS
Sbjct: 251 PVVIAAGWPGMLLHEAMGHGFEGDYNRLGTSVYAGRIGERVAPPGVNIVDDGTLQGRRGS 310
Query: 565 INIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYM 624
+N DDEG+PTQCT+LIE+GIL+GYM D ++ARLM + TGN RR+S+A++P+PRMTNT+M
Sbjct: 311 LNTDDEGHPTQCTSLIEDGILQGYMHDSLSARLMKLPPTGNGRRQSYAYLPMPRMTNTFM 370
Query: 625 LNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLI 684
NG++ PEEII+SVK GLY N GQVDI +G++ F ++ AY+I++GKIT PVKGATL
Sbjct: 371 RNGQYEPEEIIASVKRGLYLANLGSGQVDIVSGQYSFQSALAYLIEDGKITTPVKGATLT 430
Query: 685 GHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
G GP L+++SM+GND+ LD GV CGK GQ VPVGVGQPTLK+D++ VGGT
Sbjct: 431 GKGPETLQQISMVGNDLALDRGVATCGKSGQNVPVGVGQPTLKVDNLIVGGT 482
>gi|384227825|ref|YP_005619570.1| TldD protein [Buchnera aphidicola str. Ak (Acyrthosiphon kondoi)]
gi|345538765|gb|AEO08742.1| TldD protein [Buchnera aphidicola str. Ak (Acyrthosiphon kondoi)]
Length = 483
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 249/476 (52%), Positives = 340/476 (71%), Gaps = 11/476 (2%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL+ ++ + +L L + K+DY D YFQ +E+W LE GI+K GN+ ++G+GVR
Sbjct: 10 LLDANKINHQDILTALEELCAYKLDYGDLYFQSHFHESWSLENGIIKEGNYHSDEGIGVR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIAN-QSNGKIKIIKNIKKIKINSLYSFTDTI 387
AI G+ T F Y+D IS ++L + K RSI + +GK + + K + YS + +
Sbjct: 70 AIKGESTGFAYADQISIDSLRASTKKARSIIFIKGSGKTR---TLSKKQTQIFYSAINPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
+ ++REKI LL R + +AR D RV +V A L+G Y+ ILI DG +VADIRP VQ
Sbjct: 127 ETFSVREKIDLLYRADHVARSLDHRVTEVNATLTGSYEKILIASTDGNLVADIRPSVQFS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-------TDMILEKCVSNSVNSALINLEAKPAP 500
++++VE +G+RE G SG G R +Y +F ++ ++ +V AL+NL +K AP
Sbjct: 187 ISVLVEDSGKRERGRSGGGSRTDYKFFLNQDDFSKEIRIDYWSREAVRIALLNLSSKEAP 246
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
+G VVLG GWPG+LLHEAIGHGLEGDFNR+G+S F+N IGK++ASK TI+D+GTL N
Sbjct: 247 SGTFPVVLGSGWPGVLLHEAIGHGLEGDFNRRGTSIFTNMIGKKVASKLCTIIDDGTLKN 306
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
+RGS+N+DDEG P Q LIENGILK YMQD +NARLM M TGN RRES++ +P+PRMT
Sbjct: 307 QRGSLNVDDEGTPGQYNVLIENGILKKYMQDKLNARLMGMESTGNGRRESYSCLPMPRMT 366
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYML+GK +II SV G+YA NFSGGQVDIT+GKFVFS S+AY+IK GKI P+K
Sbjct: 367 NTYMLSGKSKINDIIKSVDYGVYAVNFSGGQVDITSGKFVFSTSEAYLIKKGKIITPIKN 426
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
TLIG G +++K+SM+G+D+K+DPG+GVCGKDGQ +PVG+GQP++K++S+T+GGT
Sbjct: 427 TTLIGSGLEVMQKISMVGDDLKMDPGIGVCGKDGQNIPVGIGQPSMKLESLTIGGT 482
>gi|303256608|ref|ZP_07342622.1| acid phosphatase SurE [Burkholderiales bacterium 1_1_47]
gi|330999246|ref|ZP_08322963.1| TldD/PmbA family protein [Parasutterella excrementihominis YIT
11859]
gi|302860099|gb|EFL83176.1| acid phosphatase SurE [Burkholderiales bacterium 1_1_47]
gi|329575104|gb|EGG56655.1| TldD/PmbA family protein [Parasutterella excrementihominis YIT
11859]
Length = 480
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 236/446 (52%), Positives = 335/446 (75%), Gaps = 3/446 (0%)
Query: 292 VDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINA 351
+DYADFYFQ + +E ++LEE IVKTG+++ + GVGVRA+ G+K+A YS++IS+++L A
Sbjct: 35 IDYADFYFQRSVSEGYVLEESIVKTGHYNTDIGVGVRAVCGEKSALAYSEEISRDSLFEA 94
Query: 352 VKSTRSIANQSNGKIKIIKNIK-KIKINSLYSFTDTISSINIREKIKLLERVEKIARLKD 410
V++ R+IA +N +I + N+ K LY D I + + KIKLL+ ++K AR +
Sbjct: 95 VRTVRAIAQATNNQITV--NVTPKDGPKVLYRAVDPIEAADTDAKIKLLQSLDKHARSRS 152
Query: 411 PRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYN 470
V +V ++ +D ILI + DG ++ D+RPLV++ + +I EK+G++E G +G GGR++
Sbjct: 153 SFVTQVTTSVGASHDTILIAKMDGTLIGDVRPLVRVNLGVIAEKDGKKEQGQAGGGGRFS 212
Query: 471 YNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFN 530
+ + + I+E+ +V+ A+ NL+A+PAPAG + VVLG GWPG+L+HEA+GHGLE DF
Sbjct: 213 LDRYNEEIIEQYAREAVDGAVRNLDARPAPAGSLPVVLGNGWPGVLIHEAVGHGLEADFI 272
Query: 531 RKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQ 590
RKG+S F++ IG+R+AS +T+VD+GT+A RRGS+ IDDEGN T CTTLI+ GIL+G+M
Sbjct: 273 RKGTSVFTDKIGQRVASPLVTVVDDGTIAGRRGSLTIDDEGNETHCTTLIDEGILRGFMH 332
Query: 591 DIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGG 650
D +ARLM TGN RRESFA++P+PRMTNTY+L G+ P+EIISSV G+YA+NF GG
Sbjct: 333 DETSARLMKQKTTGNGRRESFAYLPMPRMTNTYLLQGESDPQEIISSVDYGIYASNFGGG 392
Query: 651 QVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVC 710
QVDITNG FVFS S+A++I+ GK+T P+KGATL G+G + L K+ M+GND++LD G G C
Sbjct: 393 QVDITNGNFVFSMSEAWLIEKGKLTDPIKGATLTGNGADALTKIVMVGNDLELDRGCGTC 452
Query: 711 GKDGQMVPVGVGQPTLKIDSITVGGT 736
GK+GQ VP GVG PTL+ID +TVGGT
Sbjct: 453 GKNGQQVPTGVGMPTLRIDGLTVGGT 478
>gi|392307063|ref|ZP_10269597.1| suppressor of CsrA inhibitory activity; peptidase; involved in the
control of DNA gyrase [Pseudoalteromonas citrea NCIMB
1889]
Length = 482
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 256/480 (53%), Positives = 347/480 (72%), Gaps = 7/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N LL L + L + L + +++VDYAD YFQ NE W+LE+GIVK G+++I
Sbjct: 4 MNNVEQHLLADSQLTREQLEQTLSYIHQHQVDYADLYFQSCYNETWVLEDGIVKDGSYNI 63
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+GVGVRA+SG+KT F YSD I+ + L A + RSIA +G+ K ++ + +
Sbjct: 64 ERGVGVRALSGEKTGFSYSDAINVDALNKAAMAARSIAQ--SGETKKVQVFSDVTAKQQF 121
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ I+ + +K+ LL +E R P +V++++S Y+ +LI +DG DIR
Sbjct: 122 APVQPITKMADADKVALLREIEAHIRDIAPDAQQVVSSISAVYEEVLIAASDGTFATDIR 181
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEK-----CVSNSVNSALINLEA 496
PL++L ++++EKNGRRE G +G G R +Y YF +++ K +V A +NLEA
Sbjct: 182 PLIRLNCSVLLEKNGRRERGGAGGGARLDYGYFKELVAGKPRWVEYAEEAVRLAKVNLEA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRK +SAFS +G+++AS+ T+VD+G
Sbjct: 242 VDAPAGAMPVVLGAGWPGVLLHEAVGHGLEGDFNRKEASAFSGKVGQQVASELCTVVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TLA+RRGS+N+DDEG P LIE GIL+GYMQD +NARLM ++ TGN RRES+AH+P+
Sbjct: 302 TLADRRGSLNVDDEGTPAAYNVLIEKGILQGYMQDKLNARLMGVAPTGNGRRESYAHLPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ +IISSVK G++A+NF GGQVDIT+GKFVFSAS+AY+I++GKIT
Sbjct: 362 PRMTNTYMLPGQDTQADIISSVKKGIFASNFGGGQVDITSGKFVFSASEAYLIEDGKITQ 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG+GP+++ K+SM+GND++LD GVGVCGKDGQ VPVGVGQP+LKID ITVGGT
Sbjct: 422 PIKGATLIGNGPDVMHKISMVGNDLQLDRGVGVCGKDGQSVPVGVGQPSLKIDEITVGGT 481
>gi|386078664|ref|YP_005992189.1| peptidase TldD [Pantoea ananatis PA13]
gi|354987845|gb|AER31969.1| peptidase TldD [Pantoea ananatis PA13]
Length = 485
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 237/472 (50%), Positives = 334/472 (70%), Gaps = 2/472 (0%)
Query: 265 ARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQG 324
A+ LLEP+ L + +L I+G + ++VDYAD Y Q ++E+W +E G+V G+F ++QG
Sbjct: 13 AKEQLLEPYGLSDALLQDIMGRILVHRVDYADLYVQSLRHESWAMENGVVNFGSFDVDQG 72
Query: 325 VGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFT 384
G+RA+ D+TAF YS + L A +S R+IA + + + +K ++
Sbjct: 73 FGLRAVEYDQTAFAYSQHLDLKHLREAARSVRTIAKHCC--LALPEPVKARPESTHIGSR 130
Query: 385 DTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLV 444
D + + EKI LLE++ ++ R DPRVI+V A+L + V + R+D ADIRP++
Sbjct: 131 DPLVAWEAAEKISLLEKINQMTRALDPRVIQVTASLRLSHSVNYVLRHDFYQAADIRPML 190
Query: 445 QLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIM 504
L V++IVE+ G RE +G GGR ++N F D +L++ + V+SALINLEA AP+G M
Sbjct: 191 LLQVSVIVEQRGVRESATTGIGGRGDFNMFNDQVLQQTLRTMVDSALINLEAVAAPSGGM 250
Query: 505 KVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGS 564
VV+ GWPG+LLHEA+GHG EGD+NR G+S ++ IG+R+A + IVD+GTL RRGS
Sbjct: 251 PVVIAAGWPGMLLHEAMGHGFEGDYNRLGTSVYAGRIGERVAPPGVNIVDDGTLQGRRGS 310
Query: 565 INIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYM 624
+N DDEG+PTQCT+LIE+GIL+GYM D ++ARLM + TGN RR+S+A++P+PRMTNT+M
Sbjct: 311 LNTDDEGHPTQCTSLIEDGILQGYMHDSLSARLMKLPPTGNGRRQSYAYLPMPRMTNTFM 370
Query: 625 LNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLI 684
NG++ PEEII+SVK GLY N GQVDI +G++ F ++ AY+I++GKIT PVKGATL
Sbjct: 371 RNGQYEPEEIIASVKRGLYLANLGSGQVDIVSGQYSFQSALAYLIEDGKITTPVKGATLT 430
Query: 685 GHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
G GP L+++SM+GND+ LD GV CGK GQ VPVGVGQPTLK+D++ VGGT
Sbjct: 431 GKGPETLQQISMVGNDLALDRGVATCGKSGQNVPVGVGQPTLKVDNLIVGGT 482
>gi|120600380|ref|YP_964954.1| C69 family peptidase [Shewanella sp. W3-18-1]
gi|146291688|ref|YP_001182112.1| C69 family peptidase [Shewanella putrefaciens CN-32]
gi|120560473|gb|ABM26400.1| microcin-processing peptidase 2. Unknown type peptidase. MEROPS
family U62 [Shewanella sp. W3-18-1]
gi|145563378|gb|ABP74313.1| peptidase U62, modulator of DNA gyrase [Shewanella putrefaciens
CN-32]
Length = 482
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 265/480 (55%), Positives = 354/480 (73%), Gaps = 10/480 (2%)
Query: 263 NIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSIN 322
+ +S+L LD L L + ++ +DY+D YFQ +++E+W+LE+GI+K G+F I
Sbjct: 6 QVEQSLLKNGLALDG--LQSYLNTIHQHNIDYSDLYFQGSRHESWVLEDGIIKDGSFHIE 63
Query: 323 QGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYS 382
+GVGVRAISG+KT F Y+DDI+ L AV++ R IA S G+ ++ K+ K +LY
Sbjct: 64 RGVGVRAISGEKTGFAYADDITPAALSAAVQAARGIA--SAGEQTQVQAFKRQKALALYD 121
Query: 383 FTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRP 442
D I+++ +KI LL+ + R D R+I+V+ +L+G ++ ILI +DG + ADIRP
Sbjct: 122 SLDPIAAMEEVKKINLLKEADAFIRSLDSRIIQVVVSLAGVHEEILIAASDGTLAADIRP 181
Query: 443 LVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF---TDMILEKCVS---NSVNSALINLEA 496
LV+ ++I+E+NG+RE G +G GGR++Y D L C + +V A +NL A
Sbjct: 182 LVRFNCSVILEENGKRERGGAGGGGRHDYGVLMANDDTGLPMCFAFAREAVRQAQVNLNA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSSAFS +G+++ASK +T+VD+G
Sbjct: 242 IDAPAGEMPVVLGNGWPGVLLHEAVGHGLEGDFNRKGSSAFSGKVGQQVASKLVTVVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL NRRGS++IDDEG TQ T LIE+GILKGY+QD +NARLM ++ TGN RRES+AH+P+
Sbjct: 302 TLPNRRGSLSIDDEGVQTQRTVLIEDGILKGYIQDKLNARLMGVAPTGNGRRESYAHLPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYM G+ P EII SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NG++T
Sbjct: 362 PRMTNTYMTAGESDPSEIIKSVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIENGEVTQ 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
+KGATLIG+GP + ++SM+GNDM LD GVGVCGKDGQ VPVGVGQPTLK+D +TVGGT
Sbjct: 422 AIKGATLIGNGPEAMSQISMVGNDMALDRGVGVCGKDGQSVPVGVGQPTLKLDRLTVGGT 481
>gi|330446797|ref|ZP_08310448.1| modulator of DNA gyrase family protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328490988|dbj|GAA04945.1| modulator of DNA gyrase family protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 481
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 258/490 (52%), Positives = 344/490 (70%), Gaps = 25/490 (5%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN + +L+ L L ILG + VDYAD YFQ +E+ +LE+ I+K G+F+I
Sbjct: 3 LNTVETTMLDQSGLGRDELHNILGLIAARDVDYADIYFQSCWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
++GVGVRA++G+KT F YSD I++ L + K+ R I Q NGK++ + + +
Sbjct: 63 DRGVGVRAVAGEKTGFAYSDQINQLALTQSAKAARGIVRQGGNGKVQAFSPLTS---SGI 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ + + S++ +KI LLE +++ R K+P V +V +++G Y+ +L+ DG ADI
Sbjct: 120 YAPVNPLGSLDKFQKIALLEEIDRYIRTKEPLVTEVSVSINGVYEEVLVAALDGTYAADI 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSG-------------CGGRYNYNYFTDMILEKCVSNSV 487
RPLV+L ++++VEK +RE G++G G+ +F D ++
Sbjct: 180 RPLVRLSISVLVEKGDKRERGSAGGGGRYGYEAFLVETDGKSQALHFAD--------EAI 231
Query: 488 NSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIAS 547
AL+NLEA+ APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS FS +G+++ S
Sbjct: 232 RQALVNLEAEAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRKGSSMFSGQLGEQVTS 291
Query: 548 KEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNAR 607
TIVD+GTL +RRGS+NIDDEG P Q L+E G LKGYMQD +NARLM ++ TGN R
Sbjct: 292 SLCTIVDDGTLVDRRGSLNIDDEGTPAQYNVLVEGGKLKGYMQDKLNARLMGVAPTGNGR 351
Query: 608 RESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAY 667
RES+AH+P+PRMTNTYML G+ PEEIISSVK G+YA NF GGQVDIT+GKFVFSAS+AY
Sbjct: 352 RESYAHLPMPRMTNTYMLPGEHTPEEIISSVKKGIYAPNFGGGQVDITSGKFVFSASEAY 411
Query: 668 IIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLK 727
+I+NGKIT P+KGATLIG G +++VSM+GND+ +D GVGVCGK GQ VPVGVGQPTLK
Sbjct: 412 LIENGKITRPIKGATLIGSGIEAMQQVSMVGNDLDIDRGVGVCGKAGQSVPVGVGQPTLK 471
Query: 728 IDSITVGGTN 737
IDS+TVGGT
Sbjct: 472 IDSMTVGGTE 481
>gi|386312292|ref|YP_006008457.1| peptidase U62 modulator of DNA gyrase [Shewanella putrefaciens 200]
gi|319424917|gb|ADV52991.1| peptidase U62 modulator of DNA gyrase [Shewanella putrefaciens 200]
Length = 482
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 265/480 (55%), Positives = 354/480 (73%), Gaps = 10/480 (2%)
Query: 263 NIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSIN 322
+ +S+L LD L L + ++ +DY+D YFQ +++E+W+LE+GI+K G+F I
Sbjct: 6 QVEQSLLKNGLALDG--LQSYLNTIHQHNIDYSDLYFQGSRHESWVLEDGIIKDGSFHIE 63
Query: 323 QGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYS 382
+GVGVRAISG+KT F Y+DDI+ L AV++ R IA S G+ ++ K+ K +LY
Sbjct: 64 RGVGVRAISGEKTGFAYADDITPAALSAAVQAARGIA--SVGEQTQVQAFKRQKALALYD 121
Query: 383 FTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRP 442
D I+++ +KI LL+ + R D R+I+V+ +L+G ++ ILI +DG + ADIRP
Sbjct: 122 SLDPIAAMEEVKKINLLKEADAFIRSLDSRIIQVVVSLAGVHEEILIAASDGTLAADIRP 181
Query: 443 LVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF---TDMILEKCVS---NSVNSALINLEA 496
LV+ ++I+E+NG+RE G +G GGR++Y D L C + +V A +NL A
Sbjct: 182 LVRFNCSVILEENGKRERGGAGGGGRHDYGVLMANDDTGLPMCFAFAREAVRQAQVNLNA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSSAFS +G+++ASK +T+VD+G
Sbjct: 242 IDAPAGEMPVVLGNGWPGVLLHEAVGHGLEGDFNRKGSSAFSGKVGQQVASKLVTVVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL NRRGS++IDDEG TQ T LIE+GILKGY+QD +NARLM ++ TGN RRES+AH+P+
Sbjct: 302 TLPNRRGSLSIDDEGVQTQRTVLIEDGILKGYIQDKLNARLMGVAPTGNGRRESYAHLPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYM G+ P EII SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NG++T
Sbjct: 362 PRMTNTYMTAGESDPSEIIKSVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIENGEVTQ 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
+KGATLIG+GP + ++SM+GNDM LD GVGVCGKDGQ VPVGVGQPTLK+D +TVGGT
Sbjct: 422 AIKGATLIGNGPEAMSQISMVGNDMALDRGVGVCGKDGQSVPVGVGQPTLKLDRLTVGGT 481
>gi|407775494|ref|ZP_11122788.1| peptidase U62 modulator of DNA gyrase [Thalassospira profundimaris
WP0211]
gi|407281501|gb|EKF07063.1| peptidase U62 modulator of DNA gyrase [Thalassospira profundimaris
WP0211]
Length = 477
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 241/477 (50%), Positives = 341/477 (71%), Gaps = 7/477 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L ++ DLD L + + D + + ++ ++E+ + ++G +++ NF
Sbjct: 4 LRTTDNLFFAKGDLDRDRLETQVNDALSAAED-GELFLEYRQSESLVWDDGRLRSANFDT 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKIN-SL 380
QG G+RA++ + TAF +S+++S + + A ++ +++ + +GK+ ++ I N SL
Sbjct: 63 AQGFGLRAVADEATAFSHSNELSNDAVARAAETVKAVGSGRSGKV----DLGSIGTNVSL 118
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
YS + + K+ LL +++ AR +DPRV++V A++SG + + I R+ G + DI
Sbjct: 119 YSDVNPLGEATFEAKVDLLAQIDAYARSRDPRVVQVSASISGNWQAVQIWRSGGQRIGDI 178
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYN-YFTDMILEKCVSNSVNSALINLEAKPA 499
RPLV+ V+++V++ R E G+ G GGR Y+ +F + +K V S+ A++NL++ A
Sbjct: 179 RPLVRFNVSVVVKQGDRMETGSHGEGGRIGYDGFFDEKTWKKAVDESLRQAVVNLDSVAA 238
Query: 500 PAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLA 559
PAG M VVLGPGWPGILLHEAIGHGLEGDFNRKG+SAF+ +G+RIAS +T+VD+GT+
Sbjct: 239 PAGEMTVVLGPGWPGILLHEAIGHGLEGDFNRKGTSAFAGLLGQRIASPGVTVVDDGTIH 298
Query: 560 NRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRM 619
+RRGS++IDDEG PTQ T LIE+GILKG+MQD +NARL + TGN RR+S+AH P+PRM
Sbjct: 299 DRRGSLSIDDEGTPTQKTVLIEDGILKGFMQDRLNARLTGVKSTGNGRRQSYAHAPMPRM 358
Query: 620 TNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVK 679
TNTYML G PEEI++SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I++GK+ PVK
Sbjct: 359 TNTYMLGGDKEPEEILASVKKGIYAVNFGGGQVDITSGKFVFSASEAYLIEDGKLGAPVK 418
Query: 680 GATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
GATLIG+GP+ L KVSMIGNDM LD G+G CGKDGQ VPVGVGQPTL+ID +TVGGT
Sbjct: 419 GATLIGNGPDSLTKVSMIGNDMALDDGIGTCGKDGQGVPVGVGQPTLRIDGLTVGGT 475
>gi|407770762|ref|ZP_11118128.1| peptidase U62 modulator of DNA gyrase [Thalassospira xiamenensis
M-5 = DSM 17429]
gi|407286145|gb|EKF11635.1| peptidase U62 modulator of DNA gyrase [Thalassospira xiamenensis
M-5 = DSM 17429]
Length = 477
Score = 507 bits (1305), Expect = e-140, Method: Compositional matrix adjust.
Identities = 245/477 (51%), Positives = 340/477 (71%), Gaps = 7/477 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L+ S+ DLD L K + + D + + ++ ++E+ ++G +++ NF
Sbjct: 4 LSKTDSLFFANGDLDRDRLEKQVNDALGAAED-GELFLEYRQSESLTWDDGRLRSANFDT 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKIN-SL 380
QG G+RA++ + TAF +S+++S + + A ++ +++ N +GK+ ++ I N SL
Sbjct: 63 AQGFGLRAVADEATAFSHSNELSNDAVGRAAETVKAVGNGRSGKV----DLGSIGTNVSL 118
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
YS + + K+ LL +++ AR KDPRV++V A++SG + + I R+ G + DI
Sbjct: 119 YSDVNPLGEATFEAKVDLLGKIDAYARAKDPRVVQVSASISGNWQAVQIWRSGGQRIGDI 178
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYN-YFTDMILEKCVSNSVNSALINLEAKPA 499
RPLV+ V+++V++ R E G+ G GGR Y+ +F + + V ++ A +NLE+ A
Sbjct: 179 RPLVRFNVSVVVKQGDRMETGSHGQGGRIGYDGFFEEKSWKSAVDEALRQATLNLESVAA 238
Query: 500 PAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLA 559
PAG M VVLGPGWPGILLHEAIGHGLEGDFNRKG+SAF+ +G+RIAS +T+VD+GT+
Sbjct: 239 PAGEMTVVLGPGWPGILLHEAIGHGLEGDFNRKGTSAFAGLLGQRIASPGVTVVDDGTIH 298
Query: 560 NRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRM 619
+RRGS++IDDEG PTQ T LIE+GILKG+MQD +NARL + TGN RR+S+AH P+PRM
Sbjct: 299 DRRGSLSIDDEGTPTQRTVLIEDGILKGFMQDRLNARLTGVKSTGNGRRQSYAHAPMPRM 358
Query: 620 TNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVK 679
TNTYML G P EI++SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NGK+ PVK
Sbjct: 359 TNTYMLGGDKDPGEILASVKKGIYAVNFGGGQVDITSGKFVFSASEAYLIENGKLGAPVK 418
Query: 680 GATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
GATLIG+GP+ L KVSMIGNDMKLD G+G CGKDGQ VPVGVGQPTL+ID +TVGGT
Sbjct: 419 GATLIGNGPDSLTKVSMIGNDMKLDDGIGTCGKDGQGVPVGVGQPTLRIDGLTVGGT 475
>gi|404399834|ref|ZP_10991418.1| peptidase TldD [Pseudomonas fuscovaginae UPB0736]
Length = 468
Score = 507 bits (1305), Expect = e-140, Method: Compositional matrix adjust.
Identities = 229/469 (48%), Positives = 335/469 (71%), Gaps = 2/469 (0%)
Query: 268 ILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGV 327
+LLEP+ LDE+ L + L ++ ++VD+AD Y Q K E W +E+G++K+G+FS++QG G+
Sbjct: 1 MLLEPYGLDERKLARALDDVMAHQVDFADLYLQSVKRERWSIEDGLIKSGSFSVDQGFGL 60
Query: 328 RAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTI 387
RA+ D++AF YS I++ L+ A ++ R+IA I++ N++ + Y+ D I
Sbjct: 61 RALDQDQSAFAYSQQINERFLMEAARAVRTIARPGGKPIQV--NLQTTAPQTQYANVDPI 118
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S+ K+ +L+ ++++AR DPRV+ V A + E +++ R+DG + AD+RPLV +
Sbjct: 119 DSVGTDAKVAILKNIDRMARAMDPRVVNVFAMIEVEQQTVMVMRHDGRLAADVRPLVIVQ 178
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
+ ++V +RE+ ++G GGRY + + + + V+ AL+NL+A P+P+G M VV
Sbjct: 179 MNVMVANGKQREMASTGLGGRYALETLDEASIGEELRKLVDGALLNLDAIPSPSGSMPVV 238
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LGPGW GILLHEA+GHG EGDFNR G+SA+S +G+R+A K + +VD+G+L RGS+NI
Sbjct: 239 LGPGWTGILLHEAMGHGFEGDFNRLGTSAYSGRMGERVAPKGVNVVDDGSLVGHRGSLNI 298
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG QCT LIE+GIL GYM D ++ARLMNM+ TGN RR+S+AH+P+PRMTNT+M NG
Sbjct: 299 DDEGEAGQCTPLIEDGILCGYMHDSLSARLMNMAPTGNGRRQSYAHLPMPRMTNTFMRNG 358
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ PEEII+SVK GLY GQVDI +G+F F ++ AY+I++G++ PV+GATL G+G
Sbjct: 359 ELVPEEIIASVKRGLYLATPGSGQVDIVSGQFTFQSALAYLIEDGRLVAPVRGATLTGNG 418
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P L ++SM+GND+ LDPG+ VCGK GQ VPV VGQPTLKID++ VGGT
Sbjct: 419 PQTLSQISMVGNDLALDPGMAVCGKKGQSVPVSVGQPTLKIDNLIVGGT 467
>gi|315633909|ref|ZP_07889198.1| U62 family peptidase 2 TldD [Aggregatibacter segnis ATCC 33393]
gi|315477159|gb|EFU67902.1| U62 family peptidase 2 TldD [Aggregatibacter segnis ATCC 33393]
Length = 482
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 248/468 (52%), Positives = 336/468 (71%), Gaps = 9/468 (1%)
Query: 279 ILLKILGNMF----KNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDK 334
++L L N+F + VDY D YFQ +++ENW+LE+GI+K G F I++GVGVRA+SG+K
Sbjct: 15 LVLSDLSNVFDTLAQRNVDYGDLYFQLSQDENWVLEDGIIKEGGFHIDRGVGVRAVSGEK 74
Query: 335 TAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIRE 394
T F YSD I+ L ++ R IA S + + Y + + S++ +
Sbjct: 75 TGFAYSDQINLANLQQCAQAVRGIAQPSQCNFILPVRFNPVDAPLRYQPINPLYSLSQEQ 134
Query: 395 KIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEK 454
KI+LL V+K AR +DPRV++V A LS Y+ +L+ DG + ADIRPL++L V+++VE+
Sbjct: 135 KIELLRLVDKTARAEDPRVVQVNAGLSMVYEEMLVAATDGTLAADIRPLIRLSVSVLVEQ 194
Query: 455 NGRREIGNSGCGGRYNYNYFTDMIL--EKCV---SNSVNSALINLEAKPAPAGIMKVVLG 509
+G+RE G++G GGR+ +F + ++ V SV AL+NL A APAG+M VVLG
Sbjct: 195 DGKRERGSAGAGGRFGLEWFFESYQGEQRAVYFAKESVRQALVNLGAVAAPAGLMPVVLG 254
Query: 510 PGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDD 569
GWPG+LLHEA+GHGLEGDFNRK SS F+ IG+ + S TIVD+GTL +RRGS+++DD
Sbjct: 255 AGWPGVLLHEAVGHGLEGDFNRKESSLFTGKIGELVTSPLCTIVDDGTLMDRRGSVSVDD 314
Query: 570 EGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKF 629
EG P Q LI++GIL+ YMQD MNARLM + TGN RRES+AH+P+PRMTNTYML GK
Sbjct: 315 EGVPGQYNILIKDGILQKYMQDKMNARLMGVQPTGNGRRESYAHLPMPRMTNTYMLAGKD 374
Query: 630 HPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPN 689
E++++SV++G++A +F GGQVDIT+GKFVFS S+AY+I+ GKIT PVKGATLIG G
Sbjct: 375 KFEDLVASVEHGIFAPHFGGGQVDITSGKFVFSTSEAYLIEKGKITKPVKGATLIGSGIE 434
Query: 690 ILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
+++ VSM+ +++ LD GVG CGK+GQ VPVGVGQP LKID ITVGGTN
Sbjct: 435 VMQNVSMVADEVALDHGVGTCGKEGQSVPVGVGQPALKIDQITVGGTN 482
>gi|386016466|ref|YP_005934753.1| protein TldD [Pantoea ananatis AJ13355]
gi|327394535|dbj|BAK11957.1| protein TldD [Pantoea ananatis AJ13355]
Length = 485
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 237/472 (50%), Positives = 333/472 (70%), Gaps = 2/472 (0%)
Query: 265 ARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQG 324
A+ LLEP+ L + +L I+G + ++VDYAD Y Q ++E+W +E G+V G+F ++QG
Sbjct: 13 AKQQLLEPYGLSDALLQDIMGRILVHRVDYADLYVQSLRHESWAMENGVVNFGSFDVDQG 72
Query: 325 VGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFT 384
G+RA+ D+TAF YS + L A +S R+IA + + + +K +
Sbjct: 73 FGLRAVEYDQTAFAYSQHLDLKHLREAARSVRTIAKHCC--LALPEPVKARPESMHIGSR 130
Query: 385 DTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLV 444
D + + EKI LLE++ ++ R DPRVI+V A+L + V + R+D ADIRP++
Sbjct: 131 DPLVAWEAAEKISLLEKINQMTRALDPRVIQVTASLRLSHSVNYVLRHDFYQAADIRPML 190
Query: 445 QLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIM 504
L V++IVE+ G RE +G GGR ++N F D +L++ + V+SALINLEA AP+G M
Sbjct: 191 LLQVSVIVEQRGVRESATTGIGGRGDFNMFNDQVLQQTLRTMVDSALINLEAVAAPSGGM 250
Query: 505 KVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGS 564
VV+ GWPG+LLHEA+GHG EGD+NR G+S ++ IG+R+A + IVD+GTL RRGS
Sbjct: 251 PVVIAAGWPGMLLHEAMGHGFEGDYNRLGTSVYAGRIGERVAPPGVNIVDDGTLHGRRGS 310
Query: 565 INIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYM 624
+N DDEG+PTQCT+LIE+GIL+GYM D ++ARLM + TGN RR+S+A++P+PRMTNT+M
Sbjct: 311 LNTDDEGHPTQCTSLIEDGILQGYMHDSLSARLMKLPPTGNGRRQSYAYLPMPRMTNTFM 370
Query: 625 LNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLI 684
NG++ PEEII+SVK GLY N GQVDI +G++ F ++ AY+I++GKIT PVKGATL
Sbjct: 371 RNGQYEPEEIIASVKRGLYLANLGSGQVDIVSGQYSFQSALAYLIEDGKITTPVKGATLT 430
Query: 685 GHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
G GP L+++SM+GND+ LD GV CGK GQ VPVGVGQPTLK+D++ VGGT
Sbjct: 431 GKGPETLQQISMVGNDLALDRGVATCGKSGQNVPVGVGQPTLKVDNLIVGGT 482
>gi|441503382|ref|ZP_20985388.1| TldD protein [Photobacterium sp. AK15]
gi|441428880|gb|ELR66336.1| TldD protein [Photobacterium sp. AK15]
Length = 481
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 262/481 (54%), Positives = 348/481 (72%), Gaps = 7/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L + +L L L +ILG + VDYAD YFQ +E+ +LE+ I+K G+F+I
Sbjct: 3 LETVENTMLAQSGLGRDELSQILGLIAARDVDYADIYFQSCWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVGVRA+SG+KT F YSD I++ L + K+ R I +S G K+ + I + +Y
Sbjct: 63 DRGVGVRAVSGEKTGFAYSDQINQLALTQSAKAARGIV-RSGGHGKV-QAFSPISPSGIY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ D ++S + +KI LLE +++ R K+P V +V +++G Y+ +L+ DG ADIR
Sbjct: 121 APVDPLASFDKHQKIALLEEIDRYIRTKEPLVKEVSVSINGVYEQVLVAALDGTYAADIR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVS-----NSVNSALINLEA 496
PLV+L +++++EK +RE G++G GGRY Y YF K ++ ++ AL+N++A
Sbjct: 181 PLVRLSISVLIEKGDKREHGSAGGGGRYGYEYFLTEENGKSIALNYADEAIRQALVNIDA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS F+ +G+++ S TIVD+G
Sbjct: 241 DAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRKGSSMFAGQMGQQVTSSLCTIVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TLA+RRGSINIDDEG P Q L+ENG LKGYMQD +NARLM ++ TGN RRES+AH+P+
Sbjct: 301 TLADRRGSINIDDEGTPGQYNVLVENGKLKGYMQDKLNARLMGVAPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ PEEII SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NGK+T
Sbjct: 361 PRMTNTYMLPGEHTPEEIIGSVKQGIYAPNFGGGQVDITSGKFVFSASEAYLIENGKVTR 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG G ++KVSM+GND+ +D GVGVCGK GQ VPVGVGQPTLKIDS+TVGGT
Sbjct: 421 PIKGATLIGSGIEAMQKVSMVGNDLDIDRGVGVCGKAGQSVPVGVGQPTLKIDSMTVGGT 480
Query: 737 N 737
Sbjct: 481 Q 481
>gi|89075274|ref|ZP_01161701.1| putative TldD, Zn-dependent protease [Photobacterium sp. SKA34]
gi|89048955|gb|EAR54523.1| putative TldD, Zn-dependent protease [Photobacterium sp. SKA34]
Length = 481
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 262/490 (53%), Positives = 343/490 (70%), Gaps = 25/490 (5%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN + +L+ L L ILG + VDYAD YFQ +E+ +LE+ I+K G+F+I
Sbjct: 3 LNTVENTMLDQSGLGRDELHNILGLIAARDVDYADIYFQSCWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
++GVGVRA++G+KT F YSD I+ L + K+ R I Q NGK++ I + +
Sbjct: 63 DRGVGVRAVAGEKTGFAYSDQINPLALTQSAKAARGIVRQGGNGKVQTFSPITP---SGI 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ + +SS++ +KI LLE +++ R K+P V +V +++G Y+ +L+ DG ADI
Sbjct: 120 YAPINPLSSLDKFQKIALLEEIDRYIRTKEPLVTEVSVSINGVYEEVLVAALDGTYAADI 179
Query: 441 RPLVQLFVTIIVEKNGRREIGN-------------SGCGGRYNYNYFTDMILEKCVSNSV 487
RPLV+L ++++VEK +RE G+ + G+ YF D ++
Sbjct: 180 RPLVRLSISVLVEKGDKRERGSAGGGGRYGYEMFLTETDGKSQALYFAD--------EAI 231
Query: 488 NSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIAS 547
ALINLEA APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS FS +G+++ S
Sbjct: 232 RQALINLEADAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRKGSSMFSGQLGEQVTS 291
Query: 548 KEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNAR 607
TIVD+GTL +RRGSINIDDEG P+Q L+E G LKGYMQD +NARLM ++ TGN R
Sbjct: 292 PLCTIVDDGTLVDRRGSINIDDEGTPSQYNVLVEGGKLKGYMQDKLNARLMGVAPTGNGR 351
Query: 608 RESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAY 667
RES+AH+P+PRMTNTYML G+ PEEIISSVK G+YA NF GGQVDIT+GKFVFSAS+AY
Sbjct: 352 RESYAHLPMPRMTNTYMLPGEHTPEEIISSVKKGIYAPNFGGGQVDITSGKFVFSASEAY 411
Query: 668 IIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLK 727
+I+NGKIT P+KGATLIG G +++VSM+GND+ +D GVGVCGK GQ VPVGVGQPTLK
Sbjct: 412 LIENGKITRPIKGATLIGSGIEAMQQVSMVGNDLDIDRGVGVCGKAGQSVPVGVGQPTLK 471
Query: 728 IDSITVGGTN 737
IDS+TVGGT
Sbjct: 472 IDSMTVGGTE 481
>gi|33151296|ref|NP_872649.1| TldD protein [Haemophilus ducreyi 35000HP]
gi|33147516|gb|AAP95038.1| TldD protein [Haemophilus ducreyi 35000HP]
Length = 486
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 246/478 (51%), Positives = 336/478 (70%), Gaps = 13/478 (2%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL L+ L++ L K+DYAD YFQ + +E+W LE+ I+K G F I++G GVR
Sbjct: 9 LLTSSGLELSHLMQALDQFSTRKIDYADLYFQLSMDESWSLEDSIIKEGGFYIDRGFGVR 68
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+SG+KT F Y+D IS N L+ ++ RSI N + I++ K+ Y+ + +
Sbjct: 69 AVSGEKTGFAYADQISFNQLLQCAQAARSIDNTHSHLA--IQSFKQTVAPQRYAAINPLD 126
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
SI+ +K++LL V++ AR +D RV++V A +S Y+ +L+ DG + ADIRPLV+L V
Sbjct: 127 SISREQKVELLHLVDRTARAEDSRVMQVNAGISAVYEEVLVAATDGTLAADIRPLVRLSV 186
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-------TDMI----LEKCVSNSVNSALINLEAK 497
+++VE++G+RE G++G GGRY +F +M+ E +V AL+NL A
Sbjct: 187 SVLVEEDGKRERGSAGAGGRYGLTWFFEPQVLNGEMVGYNRAEFLAKEAVRQALVNLGAL 246
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
PAPAG M +VLG GWPGILLHEA+GHGLEGDFNRK SS F+ IG+++ S TIVD+GT
Sbjct: 247 PAPAGTMPIVLGAGWPGILLHEAVGHGLEGDFNRKESSLFTGKIGQQVTSPLCTIVDDGT 306
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
+ + RGS+ IDDEG P+Q LIENGIL+GY+QD +NARLM ++ TGN RRES+AH+P+P
Sbjct: 307 IVDARGSMTIDDEGVPSQRNVLIENGILRGYIQDKLNARLMGVAPTGNGRRESYAHLPMP 366
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNTY+ G+ E+I SV+ G+YA +FSGGQVDIT+GKFVFS ++AY+I+ GKIT P
Sbjct: 367 RMTNTYLTEGQHSFAEMIESVEYGIYAPHFSGGQVDITSGKFVFSTAEAYLIEKGKITKP 426
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
V GATLIG G ++ VSM+G M+LDPG+G CGK+GQ VPVGVGQP +K+D ITVGG
Sbjct: 427 VTGATLIGSGIEAMQHVSMVGRKMELDPGIGTCGKEGQSVPVGVGQPMVKLDKITVGG 484
>gi|423685093|ref|ZP_17659901.1| peptidase [Vibrio fischeri SR5]
gi|371495594|gb|EHN71189.1| peptidase [Vibrio fischeri SR5]
Length = 481
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 256/475 (53%), Positives = 351/475 (73%), Gaps = 9/475 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL + ++ L + L + K VDYAD YFQ +E+ +LE+ I+K G+F+I++GVG+R
Sbjct: 10 LLSQAGIGQQELSQTLSTIAKRDVDYADIYFQSCWHESLVLEDSIIKDGSFNIDRGVGIR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
A++G+KT F YSD I+ L + K+ R I Q GK+K + I Y + +
Sbjct: 70 AVAGEKTGFAYSDQINLEALTQSAKAARGIVQQGGEGKVKAFSSQS---IPQFYQPVNPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
+S++ ++KI LLE ++ R K+P V +V A++SG Y+ +L+ DG ADIRPLV+L
Sbjct: 127 NSLDKQQKIALLEEIDAYIRAKEPLVQEVSASISGVYEQMLVAALDGTYAADIRPLVRLS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVS-----NSVNSALINLEAKPAPAG 502
++++V++ +RE G++G GGRY Y+YF + K ++ ++ AL+NL+A APAG
Sbjct: 187 ISVLVQRGDKRERGSAGGGGRYGYDYFLTEVNGKSIALEFADEAIRQALVNLDADAAPAG 246
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
+M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS F+ +G+++ S TIVD+GT+ +RR
Sbjct: 247 MMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSVFAGKVGEKVTSSVCTIVDDGTMVDRR 306
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+N+DDEG P Q TLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNT
Sbjct: 307 GSLNVDDEGVPGQYNTLIENGVLKGYMQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNT 366
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML G++ PEEIIS+VK G+YA NF GGQVDIT+GKFVFSAS+AY+I++GKIT PVKGAT
Sbjct: 367 YMLPGEYAPEEIISTVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIEDGKITRPVKGAT 426
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
LIG G ++++SM+GND+ LD GVGVCGK GQ VPVGVGQPTLK+D++TVGGT
Sbjct: 427 LIGSGIEAMQQISMVGNDLSLDRGVGVCGKAGQSVPVGVGQPTLKLDALTVGGTE 481
>gi|339477823|ref|YP_004706643.1| putative modulator of DNA gyrase, PmbA/TldD family [Candidatus
Moranella endobia PCIT]
gi|338172374|gb|AEI74775.1| putative modulator of DNA gyrase, PmbA/TldD family [Candidatus
Moranella endobia PCIT]
Length = 481
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 255/481 (53%), Positives = 340/481 (70%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L + LL +L + L +L M ++DYAD YF+ + +E WI+E+ I+K G+ +I
Sbjct: 3 LTLVSDHLLSANNLQYEHLFNLLEQMSARRLDYADLYFKSSYHETWIIEDRIIKKGSHNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
QG+G RAISG+KT F YSD I+ L + + RSI ++ +G++KI+ + L
Sbjct: 63 EQGIGARAISGEKTGFAYSDQITFAALNKSALAARSIVREAGSGQVKILGAVSYCP---L 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y D ++S+ EKI LL RV+K AR D RV V A+LSG Y+ +L+ DG + D+
Sbjct: 120 YPLLDPLNSLPCDEKIALLHRVDKAARDADTRVQAVTASLSGLYEQMLVAATDGTLATDV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-----LEKCVSNSVNSALINLE 495
RPLVQL ++ VE++G+RE G SG GGR +YN+F + + + +V AL+NL
Sbjct: 180 RPLVQLSISAQVEQDGKRERGTSGGGGRVSYNFFLEEVNGEVRADSFAREAVRMALVNLS 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG++LHEA+GHGLEGDFNR+G+S FS IG+ +AS+ T+VD+
Sbjct: 240 AAAAPAGAMPVVLGAGWPGVMLHEAVGHGLEGDFNRRGNSVFSGQIGELVASELCTVVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTL RRGS+ IDDEG P Q LIE G LKGYMQD +NA+LM ++ TGN RRES AH+P
Sbjct: 300 GTLTGRRGSLAIDDEGVPGQYNVLIEKGWLKGYMQDKLNAQLMEVAPTGNGRRESHAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTY+L GK P EII+SV +G+YA NFSGGQVDIT+GKFVFS S+AY+I+ G++T
Sbjct: 360 MPRMTNTYLLTGKSTPAEIIASVNHGIYAPNFSGGQVDITSGKFVFSTSEAYLIEKGRVT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++++SM+GND+ LD GVGVC K+GQ +PVGVGQPT+K+D ITVGG
Sbjct: 420 KPVKGATLIGSGIEAMQQISMVGNDLALDNGVGVCNKEGQSLPVGVGQPTVKLDKITVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|221134074|ref|ZP_03560379.1| putative suppressor of CsrA inhibitory activity; putative
peptidase; involved in the control of DNA gyrase
[Glaciecola sp. HTCC2999]
Length = 481
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 245/459 (53%), Positives = 336/459 (73%), Gaps = 6/459 (1%)
Query: 284 LGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDI 343
LG + + V++AD YFQ +++E W+LE+GI+K G+++I +GVGVRAISG+KT F YSDDI
Sbjct: 24 LGLLCAHDVNFADLYFQSSQHETWVLEDGIIKNGSYNIERGVGVRAISGEKTGFAYSDDI 83
Query: 344 SKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVE 403
+ L +A K+ R+IA N K I + ++ Y + + + EKI LL+ +
Sbjct: 84 NVAALHDAAKAARTIAPAVN-VTKKITPFATLAADAKYMSDNPLLQMEDAEKIALLKATD 142
Query: 404 KIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNS 463
K R + +V +++G Y+ IL+ DG + D RPL++L ++++E+ RRE G S
Sbjct: 143 KYIREQASNASQVSVSMTGVYEEILVAATDGTLATDRRPLIRLNCSVLLEEGDRRERGAS 202
Query: 464 GCGGRYNYNYFT-----DMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLH 518
G GGR+ Y+YF E+ ++++ A +NLEA APAG M VVLG GWPG+LLH
Sbjct: 203 GAGGRFAYDYFVADDNGKPFYERLADDALHMARVNLEAVDAPAGNMPVVLGSGWPGVLLH 262
Query: 519 EAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTT 578
EA+GHGLEGDFNRKGSS FS IG+++A+K +T+VD+GT+++RRGS+ IDDEG P+Q
Sbjct: 263 EAVGHGLEGDFNRKGSSTFSGKIGQQVAAKGVTVVDDGTISDRRGSMTIDDEGTPSQYNV 322
Query: 579 LIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSV 638
LIE+GIL+GYMQD NA LM ++ TGN RRES+AH+P+PRMTNTYML G+ +IIS++
Sbjct: 323 LIEDGILQGYMQDKHNAALMGVAPTGNGRRESYAHLPMPRMTNTYMLGGEHTQADIISTI 382
Query: 639 KNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIG 698
K G++A NF GGQVDIT+GKFVFS S+AY+I++GKI+ P+KGATLIG+GP ++ K+SMIG
Sbjct: 383 KQGVFAPNFGGGQVDITSGKFVFSTSEAYLIEDGKISTPIKGATLIGNGPEVMGKISMIG 442
Query: 699 NDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
ND+ LD GVGVCGKDGQ VPVGVGQP+LK+D ITVGGT
Sbjct: 443 NDLSLDKGVGVCGKDGQSVPVGVGQPSLKVDEITVGGTQ 481
>gi|365856824|ref|ZP_09396833.1| TldD/PmbA family protein [Acetobacteraceae bacterium AT-5844]
gi|363717467|gb|EHM00842.1| TldD/PmbA family protein [Acetobacteraceae bacterium AT-5844]
Length = 475
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 234/464 (50%), Positives = 329/464 (70%), Gaps = 5/464 (1%)
Query: 274 DLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGD 333
+L+ + +IL D + + ++ ++E L++G ++T +F +G G+RA+ G+
Sbjct: 14 ELEPEAATRILSTALAG-ADDGELFLEYRESEAISLDDGRIRTASFDTTRGFGLRAVQGE 72
Query: 334 KTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIR 393
+ + +IS+ L A ++ R+I+ ++G + + + LY + + +++
Sbjct: 73 AAGYAHGGEISEPALKRAAETVRAISTGASGSLAVAPRATNAR---LYVPENPLPAMDFA 129
Query: 394 EKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVE 453
K +LL ++ AR +DPRV +V+A+L+GE+ + I R DG AD+RPLV+L V ++VE
Sbjct: 130 AKTELLAAIDAHARARDPRVTQVMASLTGEWQAVQILRADGSRAADLRPLVRLSVAVVVE 189
Query: 454 KNGRREIGNSGCGGRYNYNYFT-DMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGW 512
+GRRE G+ G GGR+ Y T + V ++ AL+NL+A PAPAG M+VVLGPGW
Sbjct: 190 ADGRRETGSHGLGGRFTYEQITSEASWRNAVEQALRQALLNLDAIPAPAGEMEVVLGPGW 249
Query: 513 PGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGN 572
PGILLHEAIGHGLEGDFNRK +SAFS +G+RIA+ +T+VD+GT+ +RRGS+ IDDEG
Sbjct: 250 PGILLHEAIGHGLEGDFNRKKTSAFSGLLGQRIAAPGVTVVDDGTIPDRRGSLTIDDEGT 309
Query: 573 PTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPE 632
P+ T +IE+GILKG++QD NARLM +S TGN RR+S+AH P+PRMTNT M+ G+ PE
Sbjct: 310 PSGRTVMIEDGILKGFIQDRQNARLMGVSPTGNGRRQSYAHAPMPRMTNTVMMAGEHTPE 369
Query: 633 EIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILK 692
EI+S+VK GLYA NF GGQVDIT+GKFVF+AS+AY+++NG+I PVKGATLIG G + L
Sbjct: 370 EILSTVKRGLYAVNFGGGQVDITSGKFVFAASEAYLVENGRIGAPVKGATLIGSGADALT 429
Query: 693 KVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
K+SMIGNDM LDPG+G CGK GQ VPVGVGQPTLK+ +TVGGT
Sbjct: 430 KISMIGNDMALDPGIGTCGKQGQGVPVGVGQPTLKMTGLTVGGT 473
>gi|157373705|ref|YP_001472305.1| C69 family peptidase [Shewanella sediminis HAW-EB3]
gi|157316079|gb|ABV35177.1| peptidase U62, modulator of DNA gyrase [Shewanella sediminis
HAW-EB3]
Length = 490
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 255/459 (55%), Positives = 345/459 (75%), Gaps = 8/459 (1%)
Query: 284 LGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDI 343
L ++ ++ VD++D YFQ +++E+W+LE+GIVK G+F I +GVGVRAI+G+KT F Y+D+I
Sbjct: 33 LNSIHQHNVDFSDLYFQGSRHESWVLEDGIVKEGSFHIERGVGVRAITGEKTGFAYADEI 92
Query: 344 SKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVE 403
+ L + ++ RSIA GK + ++ K+ ++ +LY D I+++ +KI LL+ +
Sbjct: 93 TPAALKASAEAARSIA--VAGKSETVQAWKQQEVKALYQSADPIAAMEEVKKIALLKEAD 150
Query: 404 KIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNS 463
R D R+I+V+ +LSG ++ ILI +DG + ADIRPLV+ ++I+E+N +RE G S
Sbjct: 151 AYIRSLDSRIIQVVISLSGVHEEILIAASDGTLAADIRPLVRFNCSVILEENDKRERGAS 210
Query: 464 GCGGRYNYNYF---TDMILEKCVS---NSVNSALINLEAKPAPAGIMKVVLGPGWPGILL 517
G GGR+ Y D L C S +V A +NL A APAG M VVLG GWPG+LL
Sbjct: 211 GGGGRHGYEVLMDNDDTGLPACFSFAREAVRQASVNLHAIDAPAGQMPVVLGAGWPGVLL 270
Query: 518 HEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCT 577
HEA+GHGLE DFNRKGSSAFS +G+++ASK +T+VD+G++ NRRGS++IDDEG TQ T
Sbjct: 271 HEAVGHGLEADFNRKGSSAFSGLVGQQVASKLVTVVDDGSIPNRRGSLSIDDEGVATQKT 330
Query: 578 TLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISS 637
LIE+GILKGYMQD +NARLM TGN RRES+AH+P+PRMTNTYM G+ P++II S
Sbjct: 331 VLIEDGILKGYMQDKLNARLMGELPTGNGRRESYAHLPMPRMTNTYMEAGESDPQDIIKS 390
Query: 638 VKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMI 697
VK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NG++T +KGATLIG+GP + ++SM+
Sbjct: 391 VKKGVYAPNFGGGQVDITSGKFVFSASEAYLIENGEVTQAIKGATLIGNGPEAMGQISMV 450
Query: 698 GNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
GND+ LD GVGVCGKDGQ VPVGVGQP+LK+DS+TVGGT
Sbjct: 451 GNDLALDQGVGVCGKDGQSVPVGVGQPSLKLDSLTVGGT 489
>gi|416891251|ref|ZP_11922946.1| TldD protein [Aggregatibacter aphrophilus ATCC 33389]
gi|347815650|gb|EGY32287.1| TldD protein [Aggregatibacter aphrophilus ATCC 33389]
Length = 482
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 244/463 (52%), Positives = 331/463 (71%), Gaps = 5/463 (1%)
Query: 280 LLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFY 339
L + + + VDYAD YFQ +++ENW+LE+ I+K G F I+ GVGVRA+SG+KT F Y
Sbjct: 20 LPNVFDTLAQRNVDYADLYFQLSQDENWVLEDSIIKEGGFHIDGGVGVRAVSGEKTGFAY 79
Query: 340 SDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLL 399
SD I+ L ++ R IA S + + Y + + S++ +KI+LL
Sbjct: 80 SDQINLTNLQQCAQAVRGIAQPSQCNFILPVRFNPLDAPLRYQSINPLYSLSQEQKIELL 139
Query: 400 ERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRRE 459
V++ AR +DPRV++V A LS Y+ IL+ DG + ADIRPL++L ++++VE++G+RE
Sbjct: 140 RLVDRTARAEDPRVVQVNAGLSMVYEEILVAATDGTLAADIRPLIRLSISVLVEQDGKRE 199
Query: 460 IGNSGCGGRYNYNYFTDMI--LEKCV---SNSVNSALINLEAKPAPAGIMKVVLGPGWPG 514
G++G GGR+ +F + ++ V SV AL+NL A APAG+M VVLG GWPG
Sbjct: 200 RGSAGAGGRFGLEWFFESYKGEQRAVYFAKESVRQALVNLGAVAAPAGLMPVVLGAGWPG 259
Query: 515 ILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPT 574
+LLHEA+GHGLEGDFNRK SS F+ IG+ + S TIVD+GTL +RRGS+ +DDEG P
Sbjct: 260 VLLHEAVGHGLEGDFNRKESSLFTGKIGELVTSPLCTIVDDGTLMDRRGSVTVDDEGVPG 319
Query: 575 QCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEI 634
Q LI++GIL+ YMQD MNARLM + TGN RRES+AH+P+PRMTNTYML GK E++
Sbjct: 320 QYNVLIKDGILQKYMQDKMNARLMGVQPTGNGRRESYAHLPMPRMTNTYMLAGKDKFEDL 379
Query: 635 ISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKV 694
++SV++G++A +F GGQVDIT+GKFVFS S+AY+I+ GKIT PVKGATLIG G +++ V
Sbjct: 380 VASVEHGIFAPHFGGGQVDITSGKFVFSTSEAYLIEKGKITKPVKGATLIGSGIEVMQNV 439
Query: 695 SMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
SM+ +D++LD GVG CGK+GQ VPVGVGQP L+ID ITVGGTN
Sbjct: 440 SMVADDVELDHGVGTCGKEGQSVPVGVGQPALQIDQITVGGTN 482
>gi|91794675|ref|YP_564326.1| peptidase U62, modulator of DNA gyrase [Shewanella denitrificans
OS217]
gi|91716677|gb|ABE56603.1| microcin-processing peptidase 2. Unknown type peptidase. MEROPS
family U62 [Shewanella denitrificans OS217]
Length = 482
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 241/463 (52%), Positives = 343/463 (74%), Gaps = 8/463 (1%)
Query: 280 LLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFY 339
L L + ++++DY+D YFQ +++E+W+LE+GI+K G+F I +GVGVRAI+G+KT F Y
Sbjct: 21 LASYLNTIHQHQIDYSDLYFQSSRHESWVLEDGIIKEGSFHIERGVGVRAINGEKTGFAY 80
Query: 340 SDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLL 399
+D+I+ + ++ + G+ ++ K+ + ++LY D I++++ KI LL
Sbjct: 81 ADEITP--VALEAAASAARGIAIAGQTHKVQAFKRQQQHALYDSADPIAAMDEVTKIGLL 138
Query: 400 ERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRRE 459
++ + R D R+I+V+ +LSG ++ I+I +DG + ADIRPLV+ ++I+E+NG+RE
Sbjct: 139 KQADAYIRSLDSRIIQVVVSLSGVHEEIIIAASDGTLAADIRPLVRFNCSVILEENGKRE 198
Query: 460 IGNSGCGGRYNYNYF---TDMILEKC---VSNSVNSALINLEAKPAPAGIMKVVLGPGWP 513
G++G GGR++Y+ F D L + ++V A +N+ A APAG M VVLG GWP
Sbjct: 199 RGSAGGGGRHDYSSFFITDDTGLPQSFEFARDAVRQAQVNINAVDAPAGEMPVVLGNGWP 258
Query: 514 GILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNP 573
G+LLHEA+GHGLEGDFNRKGSS FS IG+++AS +T++D+GT+ NRRGS++IDDEG P
Sbjct: 259 GVLLHEAVGHGLEGDFNRKGSSTFSGKIGQQVASNLVTVIDDGTMPNRRGSLSIDDEGVP 318
Query: 574 TQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEE 633
+Q LIE+GILKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYM G +E
Sbjct: 319 SQKNVLIEDGILKGYMQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNTYMNAGTSTLDE 378
Query: 634 IISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKK 693
+I SV G+YA NF GGQVDIT+GKFVFSAS+AY+I+ G+IT +KGATLIG+GP +
Sbjct: 379 MIKSVDKGIYAPNFGGGQVDITSGKFVFSASEAYLIEKGEITQAIKGATLIGNGPEAMGL 438
Query: 694 VSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
+SM+GND++LD GVGVCGKDGQ +PVGVGQP+LK+D +TVGGT
Sbjct: 439 ISMVGNDLQLDKGVGVCGKDGQSLPVGVGQPSLKVDRLTVGGT 481
>gi|237798589|ref|ZP_04587050.1| peptidase U62, modulator of DNA gyrase [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|331021442|gb|EGI01499.1| peptidase U62, modulator of DNA gyrase [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 479
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 259/471 (54%), Positives = 346/471 (73%), Gaps = 5/471 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L L +L + +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 11 LLAPGGLTLDSLQSVLCELAGPGIDAADLYFQGMISESWSLEDGIVKEGSFNLDQGVGVR 70
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
A SG+KT F YS+ I+ + L+ A ++ RSI+ NG+++ + + LY+ + +
Sbjct: 71 AQSGEKTGFAYSNAITHDALLTAARAARSISRAGQNGRVQAFTSQD---VAQLYAPDNPL 127
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
++ EK++LL+R++ R D R+ +V +++G ++ IL+ DG + AD+RPLV+
Sbjct: 128 EVLSRAEKVELLKRIDVATRALDSRIQQVSVSMAGVWERILVAAADGSLAADVRPLVRFN 187
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKV 506
V++IVE+NGRRE G G GGR +Y YF D ++ AL+NLEA PAPAG + V
Sbjct: 188 VSVIVEQNGRRERGGHGGGGRTDYRYFLADDRAMGYAREALRQALVNLEAIPAPAGTLPV 247
Query: 507 VLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSIN 566
VLG GW G+LLHEA+GHGLEGDFNRKGSSA+S + + +ASK TIVD+GTL RRGS++
Sbjct: 248 VLGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMCEMVASKLCTIVDDGTLVGRRGSLS 307
Query: 567 IDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLN 626
+DDEG PT+CTTLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML
Sbjct: 308 VDDEGTPTECTTLIENGVLKGYMQDKLNARLMGVASTGNGRRESYAHLPMPRMTNTYMLG 367
Query: 627 GKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGH 686
G+ P+EII+SVK G+Y + GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+
Sbjct: 368 GQSDPQEIIASVKRGIYCASLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGN 427
Query: 687 GPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
GP + +VSM+GND+ LD GVG CGKDGQ +PVGVGQPTLKID+ITVGGT
Sbjct: 428 GPEAMSRVSMVGNDLSLDSGVGTCGKDGQSLPVGVGQPTLKIDAITVGGTG 478
>gi|59710986|ref|YP_203762.1| peptidase [Vibrio fischeri ES114]
gi|59479087|gb|AAW84874.1| predicted peptidase [Vibrio fischeri ES114]
Length = 481
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 255/475 (53%), Positives = 351/475 (73%), Gaps = 9/475 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL + ++ L + L + K VDYAD YFQ +E+ +LE+ I+K G+F+I++GVG+R
Sbjct: 10 LLSQAGIGQQELSQTLSTIAKRDVDYADIYFQSCWHESLVLEDSIIKDGSFNIDRGVGIR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
A++G+KT F YSD I+ L + ++ R I Q GK+K + I Y + +
Sbjct: 70 AVAGEKTGFAYSDQINLEALTQSARAARGIVQQGGEGKVKAFSSQS---IPQFYQPVNPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
+S++ ++KI LLE ++ R K+P V +V A++SG Y+ +L+ DG ADIRPLV+L
Sbjct: 127 NSLDKQQKIALLEEIDAYIRAKEPLVQEVSASISGVYEQMLVAALDGTYAADIRPLVRLS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVS-----NSVNSALINLEAKPAPAG 502
++++V++ +RE G++G GGRY Y+YF + K ++ ++ AL+NL+A APAG
Sbjct: 187 ISVLVQRGDKRERGSAGGGGRYGYDYFLTEVNGKSIALEFADEAIRQALVNLDADAAPAG 246
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
+M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS F+ +G+++ S TIVD+GT+ +RR
Sbjct: 247 MMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSVFAGKVGEKVTSSVCTIVDDGTMVDRR 306
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+N+DDEG P Q TLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNT
Sbjct: 307 GSLNVDDEGVPGQYNTLIENGVLKGYMQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNT 366
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML G++ PEEIIS+VK G+YA NF GGQVDIT+GKFVFSAS+AY+I++GKIT PVKGAT
Sbjct: 367 YMLPGEYAPEEIISTVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIEDGKITRPVKGAT 426
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
LIG G ++++SM+GND+ LD GVGVCGK GQ VPVGVGQPTLK+D++TVGGT
Sbjct: 427 LIGSGIEAMQQISMVGNDLSLDRGVGVCGKAGQSVPVGVGQPTLKLDALTVGGTE 481
>gi|90580182|ref|ZP_01235989.1| hypothetical protein VAS14_19661 [Photobacterium angustum S14]
gi|90438484|gb|EAS63668.1| hypothetical protein VAS14_19661 [Vibrio angustum S14]
Length = 481
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 260/490 (53%), Positives = 342/490 (69%), Gaps = 25/490 (5%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN + +L+ L L ILG + VDYAD YFQ +E+ +LE+ I+K G+F+I
Sbjct: 3 LNTVENTMLDQSGLGRDELHNILGLIAARDVDYADIYFQSCWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
++GVGVRA++G+KT F YSD I+ L + K+ R I Q NGK++ + + +
Sbjct: 63 DRGVGVRAVAGEKTGFAYSDQINPLALTQSAKAARGIVRQGGNGKVQTFSPLTP---SGI 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ + + S++ +KI LLE +++ R K+P V +V +++G Y+ +L+ DG ADI
Sbjct: 120 YAPINPLGSLDKFQKIALLEEIDRYIRTKEPLVTEVSVSINGVYEEVLVAALDGTYAADI 179
Query: 441 RPLVQLFVTIIVEKNGRREIGN-------------SGCGGRYNYNYFTDMILEKCVSNSV 487
RPLV+L ++++VEK +RE G+ + G+ YF D ++
Sbjct: 180 RPLVRLSISVLVEKGDKRERGSAGGGGRYGYEMFLTETDGKSQALYFAD--------EAI 231
Query: 488 NSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIAS 547
ALINLEA APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS FS +G+++ S
Sbjct: 232 RQALINLEADAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRKGSSMFSGQLGEQVTS 291
Query: 548 KEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNAR 607
TIVD+GTL +RRGSINIDDEG P+Q L+E G LKGYMQD +NARLM ++ TGN R
Sbjct: 292 PLCTIVDDGTLVDRRGSINIDDEGTPSQYNVLVEGGKLKGYMQDKLNARLMGVAPTGNGR 351
Query: 608 RESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAY 667
RES+AH+P+PRMTNTYML G+ PEEIISSVK G+YA NF GGQVDIT+GKFVFSAS+AY
Sbjct: 352 RESYAHLPMPRMTNTYMLPGEHTPEEIISSVKKGIYAPNFGGGQVDITSGKFVFSASEAY 411
Query: 668 IIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLK 727
+I+NGKIT P+KGATLIG G +++VSM+GND+ +D GVGVCGK GQ VPVGVGQPTLK
Sbjct: 412 LIENGKITRPIKGATLIGSGIEAMQQVSMVGNDLDIDRGVGVCGKAGQSVPVGVGQPTLK 471
Query: 728 IDSITVGGTN 737
IDS+TVGGT
Sbjct: 472 IDSMTVGGTE 481
>gi|422336773|ref|ZP_16417745.1| tldD [Aggregatibacter aphrophilus F0387]
gi|353345949|gb|EHB90237.1| tldD [Aggregatibacter aphrophilus F0387]
Length = 482
Score = 503 bits (1296), Expect = e-139, Method: Compositional matrix adjust.
Identities = 244/463 (52%), Positives = 331/463 (71%), Gaps = 5/463 (1%)
Query: 280 LLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFY 339
L + + + VDYAD YFQ +++ENW+LE+ I+K G F I+ GVGVRA+SG+KT F Y
Sbjct: 20 LPNVFDTLAQRNVDYADLYFQLSQDENWVLEDSIIKEGGFHIDGGVGVRAVSGEKTGFAY 79
Query: 340 SDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLL 399
SD I+ L ++ R IA S + + Y + + S++ +KI+LL
Sbjct: 80 SDQINLTNLQQCAQAVRGIAQPSQCNFILPVRFNPLDAPLRYQSINPLHSLSQEQKIELL 139
Query: 400 ERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRRE 459
V++ AR +DPRV++V A LS Y+ +L+ DG + ADIRPL++L ++++VE++G+RE
Sbjct: 140 RLVDRTARAEDPRVVQVNAGLSMVYEEMLVAATDGTLAADIRPLIRLSISVLVEQDGKRE 199
Query: 460 IGNSGCGGRYNYNYFTDMI--LEKCV---SNSVNSALINLEAKPAPAGIMKVVLGPGWPG 514
G++G GGR+ +F + ++ V SV ALINL A APAG+M VVLG GWPG
Sbjct: 200 RGSAGAGGRFGLEWFFESYKGEQRAVYFAKESVRQALINLGAVAAPAGLMPVVLGAGWPG 259
Query: 515 ILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPT 574
+LLHEA+GHGLEGDFNRK SS F+ IG+ + S TIVD+GTL +RRGS+ +DDEG P
Sbjct: 260 VLLHEAVGHGLEGDFNRKESSLFTGKIGELVTSPLCTIVDDGTLMDRRGSVTVDDEGVPG 319
Query: 575 QCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEI 634
Q LI++GIL+ YMQD MNARLM + TGN RRES+AH+P+PRMTNTYML GK E++
Sbjct: 320 QYNVLIKDGILQKYMQDKMNARLMGVQPTGNGRRESYAHLPMPRMTNTYMLAGKDKFEDL 379
Query: 635 ISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKV 694
++SV++G++A +F GGQVDIT+GKFVFS S+AY+I+ GKIT PVKGATLIG G +++ V
Sbjct: 380 VASVEHGIFAPHFGGGQVDITSGKFVFSTSEAYLIEKGKITKPVKGATLIGSGIEVMQNV 439
Query: 695 SMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
SM+ ++++LD GVG CGK+GQ VPVGVGQP LKID ITVGGTN
Sbjct: 440 SMVADEVELDHGVGTCGKEGQSVPVGVGQPALKIDQITVGGTN 482
>gi|197334730|ref|YP_002155136.1| TldD protein [Vibrio fischeri MJ11]
gi|197316220|gb|ACH65667.1| TldD protein [Vibrio fischeri MJ11]
Length = 481
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 256/475 (53%), Positives = 351/475 (73%), Gaps = 9/475 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL + ++ L + L + K VDYAD YFQ +E+ +LE+ I+K G+F+I++GVG+R
Sbjct: 10 LLSQAGIGQQELSQTLSIIAKRDVDYADIYFQSCWHESLVLEDSIIKDGSFNIDRGVGIR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
A++G+KT F YSD I+ L + K+ R I Q GK+K + I Y + +
Sbjct: 70 AVAGEKTGFAYSDQINLEALTQSAKAARGIVQQGGEGKVKAFSSQS---IPQFYQPVNPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
+S++ ++KI LLE ++ R K+P V +V A++SG Y+ +L+ DG ADIRPLV+L
Sbjct: 127 NSLDKQQKIALLEEIDAYIRAKEPLVQEVSASISGVYEQMLVAALDGTYAADIRPLVRLS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVS-----NSVNSALINLEAKPAPAG 502
++++V++ +RE G++G GGRY Y+YF + K ++ ++ AL+NL+A APAG
Sbjct: 187 ISVLVQRGDKRERGSAGGGGRYGYDYFLTEVNGKSIALEFADEAIRQALVNLDADAAPAG 246
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
+M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS F+ +G+++ S TIVD+GT+ +RR
Sbjct: 247 MMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSVFAGKVGEKVTSSVCTIVDDGTMIDRR 306
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+N+DDEG P Q TLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNT
Sbjct: 307 GSLNVDDEGVPGQYNTLIENGVLKGYMQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNT 366
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML G++ PEEIIS+VK G+YA NF GGQVDIT+GKFVFSAS+AY+I++GKIT PVKGAT
Sbjct: 367 YMLPGEYAPEEIISTVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIEDGKITRPVKGAT 426
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
LIG G ++++SM+GND+ LD GVGVCGK GQ VPVGVGQPTLK+D++TVGGT
Sbjct: 427 LIGSGIEAMQQISMVGNDLSLDRGVGVCGKAGQSVPVGVGQPTLKLDALTVGGTE 481
>gi|113460422|ref|YP_718484.1| microcin-processing peptidase 2 [Haemophilus somnus 129PT]
gi|112822465|gb|ABI24554.1| microcin-processing peptidase 2, Unknown type peptidase, MEROPS
family U62 [Haemophilus somnus 129PT]
Length = 482
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 246/484 (50%), Positives = 341/484 (70%), Gaps = 13/484 (2%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN + +L P +L+ L + ++DYAD YFQ +++ENW+LE+GI+K G F I
Sbjct: 2 LNKVQESILAPNNLELDNLKNTFDMLSHRQIDYADLYFQLSQDENWVLEDGIIKEGGFHI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA--NQSNGKIKIIKNIKKIKINS 379
++GVGVRA++G+KT F YSD I +L + + IA NQ N IIK I +N+
Sbjct: 62 DRGVGVRAVTGEKTGFAYSDQIDLVSLQQCANAVKGIALPNQGN----IIKPIGFNAVNA 117
Query: 380 L--YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIV 437
+ Y + ++S+N +KI+LL V++ AR P V KV+ANL+ Y+ IL+ DG +
Sbjct: 118 VTRYPAVNPLNSLNKEQKIELLHLVDRTARAYSPYVTKVVANLTALYEEILVVATDGTLA 177
Query: 438 ADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEK-----CVSNSVNSALI 492
AD+RPL++L + ++ EK G+RE G++G G R ++F + + + AL+
Sbjct: 178 ADVRPLIRLSIFVMAEKAGKREQGSAGVGARVGLDWFFEPYKGEQRAIYFAKEAARQALV 237
Query: 493 NLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITI 552
NL+A APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS F+ IG+ + S TI
Sbjct: 238 NLDAIEAPAGLMPVVLGAGWPGVLLHEAVGHGLEGDFNRKGSSLFTGKIGELVTSPLCTI 297
Query: 553 VDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFA 612
VD+GTL NRRGS+ IDDEG P+QC LI++G+L+GYMQD MNARLM + TGN RRES+A
Sbjct: 298 VDDGTLPNRRGSLTIDDEGVPSQCNVLIKDGVLQGYMQDKMNARLMGVKPTGNGRRESYA 357
Query: 613 HIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNG 672
H+P+PRMTNTYML G+ E++I+SV G++A +F GGQVDI +GKF FS S+AY+I+ G
Sbjct: 358 HLPMPRMTNTYMLAGQSKFEDLIASVDYGIFAPHFGGGQVDIVSGKFTFSMSEAYLIEKG 417
Query: 673 KITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSIT 732
+IT P+KGAT+IG G ++++VSM+ ++M++D G+GVCGKDGQ VPVGVGQP KI+ IT
Sbjct: 418 RITKPIKGATMIGQGIEVMQQVSMVADNMEIDHGIGVCGKDGQSVPVGVGQPACKIEQIT 477
Query: 733 VGGT 736
VGGT
Sbjct: 478 VGGT 481
>gi|269104083|ref|ZP_06156780.1| TldD protein probably a protease [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268163981|gb|EEZ42477.1| TldD protein probably a protease [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 482
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 252/482 (52%), Positives = 345/482 (71%), Gaps = 8/482 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN +L D+ + L IL + VDYAD YFQ +E+ +LE+ I+K G+F+I
Sbjct: 3 LNTVEKTMLAQADMGQDELQAILAKIATRDVDYADIYFQSCWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVGVRAISG+KT F YSD I+ L + K+ R IA Q G+ ++ + + +Y
Sbjct: 63 DRGVGVRAISGEKTGFAYSDQINLLALEQSAKAARGIARQ--GRSAQVQAFVPVTASGIY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ D +++++ ++KI+LL++++ R K+P V +V +++G + IL+ DG AD+R
Sbjct: 121 APVDPLTTMDKQQKIELLQQIDSYIRTKEPLVTEVSVSINGVNEQILVAGLDGTYAADVR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF------TDMILEKCVSNSVNSALINLE 495
PLV+L ++++VE+ +RE G++G GGRY Y F + ++ AL++LE
Sbjct: 181 PLVRLSISVLVERGDKRERGSAGGGGRYGYQAFLAEDENGKSVALHFADEAIRQALVSLE 240
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A+ APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS FS +G+++ S TIVD+
Sbjct: 241 AQAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRKGSSMFSGQLGEQVTSSLCTIVDD 300
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTL + RGSIN+DDEG P Q L+E G LKGYMQD NARLM ++ TGN RRES+AH+P
Sbjct: 301 GTLPDLRGSINVDDEGTPGQYNVLVEGGKLKGYMQDKHNARLMGVAPTGNGRRESYAHLP 360
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G+ PEEII+SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 361 MPRMTNTYMLPGEHSPEEIIASVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIENGKIT 420
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
P+KGATL+G G +++VSM+GND+++D GVGVCGK GQ +PVGVGQPTLK+DS+TVGG
Sbjct: 421 TPIKGATLVGSGIEAMQQVSMVGNDLQIDKGVGVCGKAGQSIPVGVGQPTLKLDSMTVGG 480
Query: 736 TN 737
T
Sbjct: 481 TQ 482
>gi|251792080|ref|YP_003006800.1| TldD [Aggregatibacter aphrophilus NJ8700]
gi|247533467|gb|ACS96713.1| TldD [Aggregatibacter aphrophilus NJ8700]
Length = 482
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 243/463 (52%), Positives = 331/463 (71%), Gaps = 5/463 (1%)
Query: 280 LLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFY 339
L + + + VDYAD YFQ +++ENW+LE+ I+K G F I+ G+GVRA+SG+KT F Y
Sbjct: 20 LPNVFDTLAQRNVDYADLYFQLSQDENWVLEDSIIKEGGFHIDGGIGVRAVSGEKTGFAY 79
Query: 340 SDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLL 399
SD I+ L ++ R IA S + + Y + + S++ +KI+LL
Sbjct: 80 SDQINLTNLQQCAQAVRGIAQPSQCNFILPVRFNPLDAPLRYQSINLLYSLSQEQKIELL 139
Query: 400 ERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRRE 459
V++ AR +DPRV++V A LS Y+ +L+ DG + ADIRPL++L ++++VE++G+RE
Sbjct: 140 RLVDRTARAEDPRVVQVNAGLSMVYEEMLVAATDGTLAADIRPLIRLSISVLVEQDGKRE 199
Query: 460 IGNSGCGGRYNYNYFTDMI--LEKCV---SNSVNSALINLEAKPAPAGIMKVVLGPGWPG 514
G++G GGR+ +F + ++ V SV ALINL A APAG+M VVLG GWPG
Sbjct: 200 RGSAGAGGRFGLEWFFESYKGEQRAVYFAKESVRQALINLGAVAAPAGLMPVVLGAGWPG 259
Query: 515 ILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPT 574
+LLHEA+GHGLEGDFNRK SS F+ IG+ + S TIVD+GTL +RRGS+ +DDEG P
Sbjct: 260 VLLHEAVGHGLEGDFNRKESSLFTGKIGELVTSPLCTIVDDGTLMDRRGSVTVDDEGVPG 319
Query: 575 QCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEI 634
Q LI++GIL+ YMQD MNARLM + TGN RRES+AH+P+PRMTNTYML GK E++
Sbjct: 320 QYNVLIKDGILQKYMQDKMNARLMGVQPTGNGRRESYAHLPMPRMTNTYMLAGKDKFEDL 379
Query: 635 ISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKV 694
++SV++G++A +F GGQVDIT+GKFVFS S+AY+I+ GKIT PVKGATLIG G +++ V
Sbjct: 380 VASVEHGIFAPHFGGGQVDITSGKFVFSTSEAYLIEKGKITKPVKGATLIGSGIEVMQNV 439
Query: 695 SMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
SM+ ++++LD GVG CGK+GQ VPVGVGQP LKID ITVGGTN
Sbjct: 440 SMVADEVELDHGVGTCGKEGQSVPVGVGQPALKIDQITVGGTN 482
>gi|354599500|ref|ZP_09017517.1| peptidase U62 modulator of DNA gyrase [Brenneria sp. EniD312]
gi|353677435|gb|EHD23468.1| peptidase U62 modulator of DNA gyrase [Brenneria sp. EniD312]
Length = 481
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 256/480 (53%), Positives = 350/480 (72%), Gaps = 7/480 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L+ LL L+ + L +L + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LSFVSEQLLTANKLNLQDLSSVLELLNERRLDYGDLYFQSSYHESWVLEDRIIKNGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+QGVG+RA++G+KT F Y+D I+ N L + ++ RSI + + ++ +LY
Sbjct: 63 DQGVGIRAVNGEKTGFAYADQITLNALHQSAQAARSIVREQGAGTA--HTLGEVSHRALY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + S++ +KI LL+R + +AR D RV +V +L+G Y+++L+ DG + AD+R
Sbjct: 121 PQFNPLDSLSREDKIALLQRADAVARAADARVQEVTVSLTGVYELVLVAATDGTLAADVR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF--TD---MILEKCVSNSVNSALINLEA 496
PLV+L V+++VE +G+RE G+SG G R Y+YF TD +E +V AL+NL A
Sbjct: 181 PLVRLSVSVLVEADGKRERGSSGGGSRGGYDYFWETDEGEARVEAWAKEAVRMALVNLSA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +GK +AS+ T+VD+G
Sbjct: 241 VAAPAGSMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQMGKLVASELCTVVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TLA RRGS+ +DDEG P Q LIENGILKGYMQD +NARLM + TGN RRES+AH+P+
Sbjct: 301 TLAGRRGSLAMDDEGVPGQYNVLIENGILKGYMQDKLNARLMGAAPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML GK PEEII+SV+ GLYA NF GGQVDIT+GKFVFS S+AY+I+NG+IT
Sbjct: 361 PRMTNTYMLAGKSTPEEIIASVEYGLYAPNFGGGQVDITSGKFVFSTSEAYLIENGRITS 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G ++++SM+GND+ LD GVGVCGK+GQ +PVGVGQPTLK++S+TVGGT
Sbjct: 421 PVKGATLIGSGIEAMQQISMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLESLTVGGT 480
>gi|339025048|ref|ZP_08646913.1| DNA gyrase modulator TldD [Acetobacter tropicalis NBRC 101654]
gi|338749946|dbj|GAA10217.1| DNA gyrase modulator TldD [Acetobacter tropicalis NBRC 101654]
Length = 502
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 228/446 (51%), Positives = 329/446 (73%), Gaps = 4/446 (0%)
Query: 292 VDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINA 351
+D + + ++ ++E+ L++G++++ +F + G G+R++ G++T F +SDD+S++ L A
Sbjct: 59 MDDGELFLEYRESESIALDDGVIRSASFDTSCGFGLRSVLGEETGFAHSDDLSRSALKRA 118
Query: 352 VKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDP 411
+ ++ NG+ + + + LY+ + + + + LL R++ AR KD
Sbjct: 119 ADAVSAV---RNGRSGTMADAPRSTNTRLYTDANPLGDTDFAARSGLLSRIDAYARGKDS 175
Query: 412 RVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNY 471
RV++V+A+LSGE+ + I R DG+ VAD+RPLV+L V+++VE+ G+RE G+ G GGRY
Sbjct: 176 RVVQVMASLSGEWQAVQIIRADGVRVADLRPLVRLNVSVVVEQGGKRESGSHGLGGRYEI 235
Query: 472 N-YFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFN 530
N + + V ++ AL+ LEA+PAPAG M+VVLG GWPGILLHEA+GHGLEGDFN
Sbjct: 236 NRLLEEPTWQGAVDEALRQALVALEARPAPAGEMEVVLGAGWPGILLHEAVGHGLEGDFN 295
Query: 531 RKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQ 590
RKG+SAF+ +GKR+A+ +T++D+G+L +RRGS+ +DDEG PT T LIE+GIL GY+Q
Sbjct: 296 RKGTSAFAGLMGKRVAAPGVTVIDDGSLPDRRGSLTVDDEGTPTGRTVLIEDGILTGYLQ 355
Query: 591 DIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGG 650
D +NARLM+M+ TGN RR+S+AH+P+PRMTNT ML G+ E++I S+K GLYA +F GG
Sbjct: 356 DRLNARLMHMAPTGNGRRQSYAHVPLPRMTNTLMLPGQASTEDMIRSMKRGLYAVHFGGG 415
Query: 651 QVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVC 710
QVDIT+GKFVFSAS+AY++++GKIT PVKGATLIG G + +VSMIG DM+LDPG+G C
Sbjct: 416 QVDITSGKFVFSASEAYLVEDGKITAPVKGATLIGSGAEAMTQVSMIGKDMELDPGIGTC 475
Query: 711 GKDGQMVPVGVGQPTLKIDSITVGGT 736
GK GQ VPVGVGQPTLK+ +TVGGT
Sbjct: 476 GKAGQGVPVGVGQPTLKMAGLTVGGT 501
>gi|357974766|ref|ZP_09138737.1| peptidase U62, modulator of DNA gyrase [Sphingomonas sp. KC8]
Length = 476
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 241/472 (51%), Positives = 326/472 (69%), Gaps = 6/472 (1%)
Query: 266 RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGV 325
R L LD L++ + + D + Y Q+ +E++ ++G +KT +++ G
Sbjct: 8 RRFLYRDNALDPDGALRLTADALRG-CDDGELYLQYATSESFGFDDGRLKTADYNTQAGF 66
Query: 326 GVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTD 385
G+R +SG+ TAF +++DIS+ + A ++ + K + +LY+ D
Sbjct: 67 GLRGVSGETTAFAHANDISEAAIRRAAETMTLLDPAKAVKAAAPRRTNA----ALYTADD 122
Query: 386 TISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQ 445
+ + K+ L +R++ AR +DPRV +V LSG + V+ I R DG + D+RPLV+
Sbjct: 123 PLGLVPFATKVALCQRIDAAARARDPRVAQVTVGLSGSWSVVEIVRPDGFVAHDVRPLVR 182
Query: 446 LFVTIIVEKNGRREIGNSGCGGRYNYNY-FTDMILEKCVSNSVNSALINLEAKPAPAGIM 504
L V+I+ E+NGRRE G G GGRY Y++ F + + + ++ AL+NLE+ PAPAG M
Sbjct: 183 LNVSIVAEQNGRRETGFFGLGGRYLYDHLFEEATWNRAIDAALAQALVNLESVPAPAGEM 242
Query: 505 KVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGS 564
VV GPGWPG+LLHEAIGHGLEGDFNRKG+SAFS IG+R+A+ +T++D+G++ANRRGS
Sbjct: 243 TVVCGPGWPGVLLHEAIGHGLEGDFNRKGTSAFSGRIGERVAAPGVTVIDDGSIANRRGS 302
Query: 565 INIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYM 624
++IDDEG PTQ TLIE+GIL GYMQD +NARLM + TGN RRESFAH P+PRMTNT+M
Sbjct: 303 LSIDDEGTPTQRNTLIEDGILVGYMQDRLNARLMGVPATGNGRRESFAHAPMPRMTNTFM 362
Query: 625 LNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLI 684
L G P EI+S VKNG+YAT+F GGQVDIT+GKFVFS ++AY I+NG+I P+KGATLI
Sbjct: 363 LGGNDDPAEILSRVKNGIYATSFGGGQVDITSGKFVFSCTEAYRIENGRIGAPIKGATLI 422
Query: 685 GHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
G GP+ L KV IGNDM LD GVG+CGK GQ VP GVGQPTL I+ +TVGGT
Sbjct: 423 GDGPSALTKVKAIGNDMALDEGVGICGKGGQSVPAGVGQPTLLIEGLTVGGT 474
>gi|170717740|ref|YP_001783502.1| peptidase U62 modulator of DNA gyrase [Haemophilus somnus 2336]
gi|168825869|gb|ACA31240.1| peptidase U62 modulator of DNA gyrase [Haemophilus somnus 2336]
Length = 482
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 245/484 (50%), Positives = 340/484 (70%), Gaps = 13/484 (2%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN + +L P +L+ L + ++DYAD YFQ +++ENW+LE+ I+K G F I
Sbjct: 2 LNKVQESILAPNNLELDNLKNTFDMLSHRQIDYADLYFQLSQDENWVLEDSIIKEGGFHI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA--NQSNGKIKIIKNIKKIKINS 379
++GVGVRA++G+KT F YSD I +L + + IA NQ N IIK I +N+
Sbjct: 62 DRGVGVRAVTGEKTGFAYSDQIDLVSLQQCANAVKGIALPNQGN----IIKPIGFNAVNA 117
Query: 380 L--YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIV 437
+ Y + ++S+N +KI+LL V++ AR P V KV+ANL+ Y+ IL+ DG +
Sbjct: 118 ITRYPAVNPLNSLNKEQKIELLHLVDRTARAYSPYVTKVVANLTALYEEILVVATDGTLA 177
Query: 438 ADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEK-----CVSNSVNSALI 492
AD+RPL++L + ++ EK G+RE G++G G R ++F + + + AL+
Sbjct: 178 ADVRPLIRLSIFVMAEKAGKREQGSAGVGARVGLDWFFEPYKGEQRAIYFAKEAARQALV 237
Query: 493 NLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITI 552
NL+A APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS F+ IG+ + S TI
Sbjct: 238 NLDAIEAPAGLMPVVLGAGWPGVLLHEAVGHGLEGDFNRKGSSLFTGKIGELVTSPLCTI 297
Query: 553 VDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFA 612
VD+GTL NRRGS+ IDDEG P+QC LI++G+L+GYMQD MNARLM + TGN RRES+A
Sbjct: 298 VDDGTLPNRRGSLTIDDEGVPSQCNVLIKDGVLQGYMQDKMNARLMGVKPTGNGRRESYA 357
Query: 613 HIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNG 672
H+P+PRMTNTYML G+ E++I+SV G++A +F GGQVDI +GKF FS S+AY+I+ G
Sbjct: 358 HLPMPRMTNTYMLAGQSKFEDLIASVDYGIFAPHFGGGQVDIVSGKFTFSMSEAYLIEKG 417
Query: 673 KITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSIT 732
+IT P+KGAT+IG G ++++VSM+ ++M++D G+GVCGKDGQ VPVGVGQP KI+ IT
Sbjct: 418 RITKPIKGATMIGQGIEVMQQVSMVADNMEIDHGIGVCGKDGQSVPVGVGQPACKIEQIT 477
Query: 733 VGGT 736
VGGT
Sbjct: 478 VGGT 481
>gi|440509873|ref|YP_007347309.1| protein tldD [Candidatus Blochmannia chromaiodes str. 640]
gi|440454086|gb|AGC03578.1| protein tldD [Candidatus Blochmannia chromaiodes str. 640]
Length = 487
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 262/478 (54%), Positives = 347/478 (72%), Gaps = 9/478 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P +L LL +L K ++DY+D YFQ +E W LE+ I+K+G+++I+QG G R
Sbjct: 10 LLAPNNLQYNDLLYLLDMTEKFQIDYSDLYFQSYCHETWALEDSIIKSGSYTIDQGAGAR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQ---SNGKIKIIKNIKKIKINSLYSFTD 385
I G++T F Y+D ++ + L+ ++K+ SI N+ +N I + K + YS+ +
Sbjct: 70 VIIGEQTGFAYTDQLTLDALMRSMKAATSITNERHCNNNNITVDLKKHKDIYPTAYSYMN 129
Query: 386 TISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQ 445
+S+I+ EKI+LL R++KIAR D RV KV ANLSG Y+ IL+ DG + AD+RPLV+
Sbjct: 130 PLSNISKEEKIELLMRIDKIARATDSRVQKVNANLSGVYEQILVAATDGTLSADVRPLVR 189
Query: 446 LFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILE-----KC-VSNSVNSALINLEAKPA 499
L + + EK+G+RE G SG GGR+ Y++F D I E C ++V +LINLEA A
Sbjct: 190 LSILVQSEKDGKREQGISGGGGRFGYDFFLDTISEGEIRADCWTKDAVQMSLINLEAVAA 249
Query: 500 PAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLA 559
PAG M VVLG GWPGILLHEA+GHGLEGDFNR+GSS FSN IGK +AS+ TIVD+ TL
Sbjct: 250 PAGTMTVVLGSGWPGILLHEAVGHGLEGDFNRRGSSVFSNKIGKIVASELCTIVDDATLK 309
Query: 560 NRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRM 619
RGS+ IDDEG P Q LI+NGIL+GYMQD +NA+LM + TGN RRES+A +P+PRM
Sbjct: 310 GSRGSLTIDDEGIPGQYNILIKNGILQGYMQDKLNAKLMGCTSTGNGRRESYASLPMPRM 369
Query: 620 TNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVK 679
TNTYML G+ PEEII+SV G+YATNFSGGQVDIT+GKFVFS S+A++I+ G+IT +K
Sbjct: 370 TNTYMLPGQSTPEEIINSVDYGVYATNFSGGQVDITSGKFVFSTSEAFLIEKGRITKSIK 429
Query: 680 GATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
GATLIG G I+K VSM+GND+ LD GVG+C K+GQ +PV VGQPT+K+++IT+GGTN
Sbjct: 430 GATLIGSGIEIMKSVSMVGNDLFLDKGVGICIKNGQNIPVSVGQPTIKLNNITIGGTN 487
>gi|330813643|ref|YP_004357882.1| TldD protein, part of proposed TldE/TldD proteolytic complex
[Candidatus Pelagibacter sp. IMCC9063]
gi|327486738|gb|AEA81143.1| TldD protein, part of proposed TldE/TldD proteolytic complex
[Candidatus Pelagibacter sp. IMCC9063]
Length = 470
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 250/471 (53%), Positives = 333/471 (70%), Gaps = 5/471 (1%)
Query: 267 SILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVG 326
S + DL + +++ KN D + +F+ +KNE+++L++ +K ++ + G G
Sbjct: 2 STFFKDTDLTRQEADRLVSETLKN-CDDGELFFESSKNESFVLDDNKIKNTSYDTSLGYG 60
Query: 327 VRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDT 386
+RA++ D TA+ +S++ISK +L A KS S NGKI K +YS +
Sbjct: 61 LRAVTDDVTAYSHSNEISKKSLTEASKSLLSSLKNKNGKISTSPQRSNSK---MYSDVNP 117
Query: 387 ISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQL 446
I + EK+ +L+ V++ R KD + +V A++SGEY I I ++D D+RPL++
Sbjct: 118 IEAKPFGEKVSILKNVDEYLRKKDSLIKQVSASISGEYQEIEIIKSDSQSFQDVRPLIRF 177
Query: 447 FVTIIVEKNGRREIGNSGCGGRYNYN-YFTDMILEKCVSNSVNSALINLEAKPAPAGIMK 505
VT++VEKNGRRE G+ G GGR NY+ Y + +K + A+INLE+K APAG MK
Sbjct: 178 NVTVMVEKNGRRETGSYGTGGRMNYDDYIANNDWKKVCDEAYRQAMINLESKEAPAGEMK 237
Query: 506 VVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSI 565
VVLGPGWPGILLHEAIGHGLEGDFNRK +SAF N + +++AS+ +TIVD+GT++NRRGSI
Sbjct: 238 VVLGPGWPGILLHEAIGHGLEGDFNRKKTSAFHNLMNQKVASEHVTIVDDGTISNRRGSI 297
Query: 566 NIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYML 625
IDDEG P+ T LIENGILK YMQD +NARLM + TGN RRESF P+PRMTNT+ML
Sbjct: 298 TIDDEGTPSSNTVLIENGILKNYMQDRLNARLMKTTSTGNGRRESFECAPMPRMTNTFML 357
Query: 626 NGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIG 685
NGK E++I SV G++A +F GGQVDITNGKFVFS ++AY I NGKI PVKGAT+IG
Sbjct: 358 NGKHSQEDMIKSVDKGIFAVSFGGGQVDITNGKFVFSCTEAYEINNGKIGSPVKGATIIG 417
Query: 686 HGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
+GP+IL KVSM+GNDMKLDPG+G CGK+GQ VPVGVGQP++ +D ITVGGT
Sbjct: 418 NGPDILTKVSMVGNDMKLDPGIGTCGKNGQWVPVGVGQPSILVDEITVGGT 468
>gi|71892079|ref|YP_277809.1| hypothetical protein BPEN_305 [Candidatus Blochmannia
pennsylvanicus str. BPEN]
gi|71796185|gb|AAZ40936.1| TldD [Candidatus Blochmannia pennsylvanicus str. BPEN]
Length = 487
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 262/479 (54%), Positives = 349/479 (72%), Gaps = 11/479 (2%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P +L LL +L K ++DY+D YFQ +E W LEE I+K+G+++I+QG G R
Sbjct: 10 LLAPNNLQYNDLLYLLDMTEKFQIDYSDLYFQSYCHETWALEESIIKSGSYTIDQGAGAR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQ--SNGKIKIIKNIKKIK--INSLYSFT 384
I G++T F Y+D ++ + L+ ++K+ SI N+ N I + ++K+ K + YS+
Sbjct: 70 VIIGEQTGFAYTDQLTLDALMRSMKAATSITNERHCNNNITTV-DLKEHKDIYPTAYSYM 128
Query: 385 DTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLV 444
+ +S+I+ EKI+LL R++KIAR D RV KV A+LSG Y+ IL+ DG + AD+RPLV
Sbjct: 129 NPLSNISKEEKIELLMRIDKIARATDSRVQKVNASLSGVYEQILVAATDGTLSADVRPLV 188
Query: 445 QLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILE-----KC-VSNSVNSALINLEAKP 498
+L + + E++G+RE G SG GGR+ Y++F D I E C ++V +LINLEA
Sbjct: 189 RLSILVQSEQDGKREQGISGGGGRFGYDFFLDTIAEGEIRADCWTKDAVQMSLINLEAVA 248
Query: 499 APAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL 558
APAG M VVLG GWPGILLHEA+GHGLEGDFNR+GSS FSN IGK +AS+ TIVD+ TL
Sbjct: 249 APAGTMTVVLGSGWPGILLHEAVGHGLEGDFNRRGSSVFSNKIGKIVASELCTIVDDATL 308
Query: 559 ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPR 618
RGS+ IDDEG P Q LI+NGIL+GYMQD +NA+LM + TGN RRES+A +P+PR
Sbjct: 309 KGSRGSLTIDDEGIPGQYNILIKNGILQGYMQDKLNAKLMGCTSTGNGRRESYASLPMPR 368
Query: 619 MTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPV 678
MTNTYML G+ PEEII SV G+YATNFSGGQVDIT+GKFVFS S+A++I+ G+IT +
Sbjct: 369 MTNTYMLPGQSTPEEIIDSVDYGVYATNFSGGQVDITSGKFVFSTSEAFLIEKGRITKSI 428
Query: 679 KGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
KGATLIG G I+K VSM+GND+ LD GVG+C K+GQ +PV VGQPT+K+++IT+GGTN
Sbjct: 429 KGATLIGSGIEIMKSVSMVGNDLSLDKGVGICIKNGQNIPVSVGQPTIKLNNITIGGTN 487
>gi|336125292|ref|YP_004567340.1| Microcin-processing peptidase 2 [Vibrio anguillarum 775]
gi|335343015|gb|AEH34298.1| Microcin-processing peptidase 2 (TldD) [Vibrio anguillarum 775]
Length = 481
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 258/481 (53%), Positives = 346/481 (71%), Gaps = 7/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N LL+P L E+ + L + ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 INRIEDALLKPAGLTEQDIADTLATIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+ GVGVRAI+G+KT F YSD I L + + R IA Q GK ++ K+ + Y
Sbjct: 63 DCGVGVRAITGEKTGFAYSDQIQLEGLKQSAIAARGIAQQ--GKSGCVQAFKRSDNQAYY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + ++S ++K +LL+ ++ R K+P + +V +LSG ++ +L+ DG DIR
Sbjct: 121 AADNPLASWEKKQKTELLQELDAYIRTKEPLIQEVSVSLSGVHEQMLVAATDGTYAGDIR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCV----SNSVNSALINLEA 496
PLV+L ++++ +K RRE G+SG GGR+ Y++F T+ K ++ AL+NLEA
Sbjct: 181 PLVRLSISVLAQKGDRRERGSSGGGGRFGYDFFLTEQDGRKVAFQFADEAIRQALVNLEA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS FS IG+++ S TIVD+G
Sbjct: 241 VAAPAGAMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSVFSGKIGQKVTSTLCTIVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL + RGS+N+DDEG Q TLIENG+LKGY+QD +NARLM ++ TGN RRES+AH+P+
Sbjct: 301 TLKDLRGSLNVDDEGVNGQYNTLIENGVLKGYIQDKLNARLMGVNPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ PEEIIS+VK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NGKITY
Sbjct: 361 PRMTNTYMLPGEHTPEEIISTVKKGVYAPNFGGGQVDITSGKFVFSASEAYMIENGKITY 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG G +++VSM+GND+ LD GVGVCGK GQ VPVGVGQPTLK+DS+TVGGT
Sbjct: 421 PIKGATLIGSGIEAMQQVSMVGNDLSLDRGVGVCGKAGQSVPVGVGQPTLKLDSLTVGGT 480
Query: 737 N 737
Sbjct: 481 E 481
>gi|343495898|ref|ZP_08734007.1| TldD protein [Vibrio nigripulchritudo ATCC 27043]
gi|342822024|gb|EGU56783.1| TldD protein [Vibrio nigripulchritudo ATCC 27043]
Length = 481
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 263/478 (55%), Positives = 346/478 (72%), Gaps = 15/478 (3%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L E+ L + LG + +DYAD YFQ + +E+ +LE+ I+K G+F+I++GVGVR
Sbjct: 10 LLAPTGLTEQDLTETLGIIASRDIDYADLYFQSSWHESLVLEDSIIKDGSFNIDRGVGVR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSLYSFTDTI 387
AI+G+KT F YSD I L + + R IA Q NG++K + +I Y T+ +
Sbjct: 70 AITGEKTGFAYSDQIDLTGLKQSAIAARGIAGQGQNGQVKAFSRNQAPEI---YQSTNPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S+ ++KI+LL++++ R K+P V +V +LSG Y+ +L+ DG DIRPLV+L
Sbjct: 127 ESLEKQQKIELLKQLDAYIRTKEPLVQEVSVSLSGVYEQMLVAATDGTYAGDIRPLVRLS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEK--------CVSNSVNSALINLEAKPA 499
++++ +K RRE G+SG GGRY Y +F + E+ ++ A++NLEA A
Sbjct: 187 ISVLAKKGDRRERGSSGGGGRYGYEFF---LQEENGRKKAFEFADEAIRQAIVNLEADAA 243
Query: 500 PAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLA 559
PAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS FS +G+++ SK TIVD+GTL
Sbjct: 244 PAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRKGSSVFSGKVGEQVTSKHCTIVDDGTLP 303
Query: 560 NRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRM 619
+ RGS+NIDDEG + TLIENG+LKGYMQD NA LM ++ TGN RRES+AH+P+PRM
Sbjct: 304 DLRGSLNIDDEGVTGKYNTLIENGVLKGYMQDKHNAHLMGVAPTGNGRRESYAHLPMPRM 363
Query: 620 TNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVK 679
TNTYML G+ P+EIIS+VKNGLYA NF GGQVDIT+GKFVFS S+AY+I++GKIT PVK
Sbjct: 364 TNTYMLAGEHSPDEIISTVKNGLYAPNFGGGQVDITSGKFVFSTSEAYLIEDGKITRPVK 423
Query: 680 GATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
GATLIG G +++VSM+GND++LD GVGVCGK GQ VPVGVGQPTLK+DSITVGGT
Sbjct: 424 GATLIGSGIEAMQQVSMVGNDLELDRGVGVCGKAGQSVPVGVGQPTLKLDSITVGGTE 481
>gi|365541021|ref|ZP_09366196.1| Microcin-processing peptidase 2 [Vibrio ordalii ATCC 33509]
Length = 481
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 257/481 (53%), Positives = 346/481 (71%), Gaps = 7/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N LL+P L E+ + L + ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 INRIEDALLKPAGLTEQDIADTLATIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+ GVGVRA++G+KT F YSD I L + + R IA Q GK ++ K+ + Y
Sbjct: 63 DCGVGVRAVTGEKTGFAYSDQIQLEGLKQSAIAARGIAQQ--GKSGCVQAFKRSDNQAYY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + ++S ++K +LL+ ++ R K+P + +V +LSG ++ +L+ DG DIR
Sbjct: 121 AADNPLASWEKKQKTELLQELDAYIRTKEPLIQEVSVSLSGVHEQMLVAATDGTYAGDIR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCV----SNSVNSALINLEA 496
PLV+L ++++ +K RRE G+SG GGR+ Y++F T+ K ++ AL+NLEA
Sbjct: 181 PLVRLSISVLAQKGDRRERGSSGGGGRFGYDFFLTEQDGRKVAFQFADEAIRQALVNLEA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS FS IG+++ S TIVD+G
Sbjct: 241 VAAPAGAMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSVFSGKIGQKVTSTLCTIVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL + RGS+N+DDEG Q TLIENG+LKGY+QD +NARLM ++ TGN RRES+AH+P+
Sbjct: 301 TLKDLRGSLNVDDEGVNGQYNTLIENGVLKGYIQDKLNARLMGVNPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ PEEIIS+VK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NGKITY
Sbjct: 361 PRMTNTYMLPGEHTPEEIISTVKKGVYAPNFGGGQVDITSGKFVFSASEAYMIENGKITY 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG G +++VSM+GND+ LD GVGVCGK GQ VPVGVGQPTLK+DS+TVGGT
Sbjct: 421 PIKGATLIGSGIEAMQQVSMVGNDLSLDRGVGVCGKAGQSVPVGVGQPTLKLDSLTVGGT 480
Query: 737 N 737
Sbjct: 481 E 481
>gi|90412991|ref|ZP_01220989.1| putative TldD [Photobacterium profundum 3TCK]
gi|90326006|gb|EAS42445.1| putative TldD [Photobacterium profundum 3TCK]
Length = 481
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 263/481 (54%), Positives = 343/481 (71%), Gaps = 7/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L + +L L + L KIL + VDYAD YFQ +E+ +LE+ I+K G+F+I
Sbjct: 3 LKTVENTMLTQSGLGREELHKILSMIAVRDVDYADIYFQSCWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVGVRA++G+KT F YSD I++ L + K+ R I Q G +K I + +Y
Sbjct: 63 DRGVGVRAVAGEKTGFAYSDQINELALTQSAKAARGIVRQ--GGNASVKAFSPISPSGIY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ D + S + +KI LLE ++ R K+P V +V +++G Y+ +L+ DG ADIR
Sbjct: 121 APVDPLGSFDKFQKIALLEEIDSYIRTKEPLVKEVSVSINGVYEQVLVAALDGTYAADIR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVS-----NSVNSALINLEA 496
PLV+L ++++VEK +RE G++G GGRY Y +F K + ++ AL+NLEA
Sbjct: 181 PLVRLSISVLVEKGDKRERGSAGGGGRYGYEHFLHEEDGKSAALNFADEAIRQALVNLEA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
+ APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS FS +G+++ S TIVD+G
Sbjct: 241 EAAPAGTMPVVLGNGWPGVLLHEAVGHGLEGDFNRKGSSMFSGQMGQQVTSPLCTIVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL +RRGSINIDDEG P Q L+E G LKGY+QD +NARLM + TGN RRES+AH+P+
Sbjct: 301 TLVDRRGSINIDDEGVPGQYNVLVEGGKLKGYIQDKLNARLMGVDPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ PEEIISSVKNG+YA NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 361 PRMTNTYMLPGEHAPEEIISSVKNGIYAPNFGGGQVDITSGKFVFSASEAYLIENGKITR 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG G +++VSM+GND+ +D GVGVCGK GQ VPVGVGQPTLKIDS+TVGGT
Sbjct: 421 PIKGATLIGSGIEAMQQVSMVGNDLSIDRGVGVCGKAGQSVPVGVGQPTLKIDSMTVGGT 480
Query: 737 N 737
Sbjct: 481 E 481
>gi|416068486|ref|ZP_11582802.1| peptidase U62 modulator of DNA gyrase [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|348000978|gb|EGY41741.1| peptidase U62 modulator of DNA gyrase [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
Length = 482
Score = 497 bits (1279), Expect = e-137, Method: Compositional matrix adjust.
Identities = 246/463 (53%), Positives = 333/463 (71%), Gaps = 5/463 (1%)
Query: 280 LLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFY 339
L + + + VDYAD YFQ +++ENW+LE+GI+K G F I++GVGVRA+SG+KT F Y
Sbjct: 20 LPNVFDTLAQRNVDYADLYFQLSQDENWVLEDGIIKEGGFHIDRGVGVRAVSGEKTGFAY 79
Query: 340 SDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLL 399
SD I+ L ++ R IA S + + Y + + S++ +KI+LL
Sbjct: 80 SDQINLANLQQCAQAVRGIAQPSQCNFILPVKFNPVDTTLRYQPINPLHSLSQEQKIELL 139
Query: 400 ERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRRE 459
V++ AR +DPRV++V A LS Y+ IL+ DG + ADIRPL++L V+++VE++G+RE
Sbjct: 140 RLVDRTARAEDPRVVQVNAGLSMVYEEILVAATDGTLAADIRPLIRLSVSVLVEQDGKRE 199
Query: 460 IGNSGCGGRYNYNYFTDMI--LEKCV---SNSVNSALINLEAKPAPAGIMKVVLGPGWPG 514
G +G GGR+ ++F + ++ V +V AL+NL A APAG+M VVLG GWPG
Sbjct: 200 RGGAGAGGRFALDWFFESYNGEQRAVYFAKEAVRQALVNLSAVAAPAGLMPVVLGAGWPG 259
Query: 515 ILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPT 574
+LLHEA+GHGLEGDFNRK SS F+ IG+ + S TIVD+GTL +RRGS+ +DDEG P+
Sbjct: 260 VLLHEAVGHGLEGDFNRKESSLFTGKIGELVTSPLCTIVDDGTLMDRRGSVTVDDEGVPS 319
Query: 575 QCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEI 634
Q LI+NGIL+ YMQD MNARLM + TGN RRES+AH+P+PRMTNTYML GK E++
Sbjct: 320 QHNVLIKNGILQKYMQDKMNARLMGVQPTGNGRRESYAHLPMPRMTNTYMLAGKDKFEDL 379
Query: 635 ISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKV 694
++SV+ G++A +F GGQVDIT+GKFVFS S+AY+I+ GKIT PVKGATLIG G +++ V
Sbjct: 380 VASVEQGIFAPHFGGGQVDITSGKFVFSTSEAYLIEKGKITKPVKGATLIGSGIEVMQNV 439
Query: 695 SMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
SM+ ++++LD GVG CGK+GQ VPVGVGQP LKID ITVGGTN
Sbjct: 440 SMVADEVELDHGVGTCGKEGQSVPVGVGQPALKIDQITVGGTN 482
>gi|374313487|ref|YP_005059917.1| peptidase U62 modulator of DNA gyrase [Granulicella mallensis
MP5ACTX8]
gi|358755497|gb|AEU38887.1| peptidase U62 modulator of DNA gyrase [Granulicella mallensis
MP5ACTX8]
Length = 488
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 239/471 (50%), Positives = 328/471 (69%), Gaps = 4/471 (0%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
E L E++L + LG ++AD YF+ + + ++EGIVKT I+ G G+R
Sbjct: 19 FFEKLGLSERLLERCLGEALSAGGEFADLYFEAVTSTSLGMDEGIVKTAAQGISVGCGIR 78
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
+SG++T F Y+DD+S + L+ A ++ IA S +I+ ++ + + LY S
Sbjct: 79 VLSGERTGFAYTDDLSSDRLLKAARTAALIA--SGPQIERVQGFTETRTPQLYPVAGVSS 136
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
+ I K+KL+ER +K AR DPR+++V A+++ E ILI +DG +D +PL +L +
Sbjct: 137 DVEIAAKLKLIERADKAARDFDPRIVQVRASINDELRRILIAASDGTFASDTQPLARLNI 196
Query: 449 TIIV-EKNGRREIGNSGCGGRYNYNYFT-DMILEKCVSNSVNSALINLEAKPAPAGIMKV 506
+I ++ G SG GGR ++FT D E + +A++ L A APAG M+V
Sbjct: 197 FVIAKDEQNNTARGTSGGGGRVALDFFTGDKSPEHFAREAARTAILQLGAVAAPAGEMEV 256
Query: 507 VLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSIN 566
VLGPGWPG+LLHEA+GHGLE DFNRK +SAF+ IG+++AS ++T+VDNGT+ RRGS+N
Sbjct: 257 VLGPGWPGVLLHEAVGHGLEADFNRKKTSAFAGLIGQQVASSKVTVVDNGTMPGRRGSLN 316
Query: 567 IDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLN 626
+DDEGNPTQ T LIENGIL+GY+ D +++RLM M TG+ RRES+ IP+PRMTNTYMLN
Sbjct: 317 VDDEGNPTQETVLIENGILRGYLSDKLSSRLMKMPNTGSGRRESYQAIPMPRMTNTYMLN 376
Query: 627 GKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGH 686
G+ PE+I+ SVK GLYA NF GG VDITNGKFVF+AS+AY+I++GK+T PVKGATLIG+
Sbjct: 377 GEDQPEDILKSVKRGLYAVNFGGGSVDITNGKFVFTASEAYLIEDGKVTAPVKGATLIGN 436
Query: 687 GPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
GP LK VSM+GND+ LD G+G CGK GQ VPVGVG PT+K+D +TVGGT
Sbjct: 437 GPEALKYVSMVGNDLALDEGIGTCGKAGQSVPVGVGMPTVKLDRMTVGGTG 487
>gi|387121751|ref|YP_006287634.1| microcin-processing peptidase 2 [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|416044730|ref|ZP_11575122.1| U62 family peptidase 2 TldD [Aggregatibacter actinomycetemcomitans
serotype d str. I63B]
gi|347996064|gb|EGY37185.1| U62 family peptidase 2 TldD [Aggregatibacter actinomycetemcomitans
serotype d str. I63B]
gi|385876243|gb|AFI87802.1| microcin-processing peptidase 2 [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 482
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 245/463 (52%), Positives = 331/463 (71%), Gaps = 5/463 (1%)
Query: 280 LLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFY 339
L + + + VDYAD YFQ +++ENW+LE+GI+K G F I++GVGVRA+SG+KT F Y
Sbjct: 20 LPNVFDTLAQRNVDYADLYFQLSQDENWVLEDGIIKEGGFHIDRGVGVRAVSGEKTGFAY 79
Query: 340 SDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLL 399
SD I+ L ++ R IA S + + Y + + S++ +KI+LL
Sbjct: 80 SDQINLANLQQCAQAVRGIAQPSQCNFILPVKFNPVDTTLRYQPINPLHSLSQEQKIELL 139
Query: 400 ERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRRE 459
V++ AR +DPRV++V A LS Y+ IL+ DG + ADIRPL++L V+++VE++G+RE
Sbjct: 140 RLVDRTARAEDPRVVQVNAGLSMVYEEILVAATDGTLAADIRPLIRLSVSVLVEQDGKRE 199
Query: 460 IGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPG 514
G +G GGR+ ++F + + +V AL+NL A APAG+M VVLG GWPG
Sbjct: 200 RGGAGAGGRFALDWFFESYNGEQRVVYFAKEAVRQALVNLSAVAAPAGLMPVVLGAGWPG 259
Query: 515 ILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPT 574
+LLHEA+GHGLEGDFNRK SS F+ IG+ + S TIVD+GTL +RRGS+ +DDEG P+
Sbjct: 260 VLLHEAVGHGLEGDFNRKESSLFTGKIGELVTSPLCTIVDDGTLMDRRGSVTVDDEGVPS 319
Query: 575 QCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEI 634
Q LI+NGIL+ YMQD MNARLM + TGN RRES+AH+P+PRMTNTYML GK E++
Sbjct: 320 QHNVLIKNGILQKYMQDKMNARLMGVQPTGNGRRESYAHLPMPRMTNTYMLAGKDKFEDL 379
Query: 635 ISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKV 694
++SV+ G++A +F GGQVDIT+GKFVFS S+AY+I+ GKIT PVKGATLIG G +++ V
Sbjct: 380 VASVEQGIFAPHFGGGQVDITSGKFVFSTSEAYLIEKGKITKPVKGATLIGSGIEVMQNV 439
Query: 695 SMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
SM+ ++++LD GVG CGK+GQ VPVGVGQP LKID ITVGGTN
Sbjct: 440 SMVADEVELDHGVGTCGKEGQSVPVGVGQPALKIDQITVGGTN 482
>gi|422908955|ref|ZP_16943610.1| modulator of DNA gyrase family protein [Vibrio cholerae HE-09]
gi|424658316|ref|ZP_18095573.1| modulator of DNA gyrase family protein [Vibrio cholerae HE-16]
gi|341636447|gb|EGS61143.1| modulator of DNA gyrase family protein [Vibrio cholerae HE-09]
gi|408055321|gb|EKG90255.1| modulator of DNA gyrase family protein [Vibrio cholerae HE-16]
Length = 481
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 253/481 (52%), Positives = 343/481 (71%), Gaps = 7/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N + LL P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 MNQIETALLAPAGLTEQDIADTLSSIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+ GVGVRA+SG+KT F YSD I L + + R IA Q G+ ++ K+ + + Y
Sbjct: 63 DCGVGVRAVSGEKTGFAYSDQIQLEGLKQSAIAARGIAQQ--GQNLTVQAFKRAQHPAFY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + S ++K +LL++++ R K+P + +V +LSG ++ IL+ DG DIR
Sbjct: 121 GAHNPLESWEKQQKTELLKQLDAYIRTKEPLITEVSVSLSGVHEQILVAATDGTYAGDIR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L ++++ +K RRE G++G GGR+ Y+YF I ++ AL+NLEA
Sbjct: 181 PLVRLSISVLAQKGDRRERGSAGGGGRFGYDYFLQEEAGQKIAFSFADEAIRQALVNLEA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS F+ +GK++ S TIVD+G
Sbjct: 241 VAAPAGTMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSVFAGKVGKKVTSDLCTIVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL + RGS+N+DDEG Q LIE GILKGY+QD +NARLM ++ TGN RRES+AH+P+
Sbjct: 301 TLKDLRGSLNVDDEGVSGQYNVLIEKGILKGYIQDKLNARLMGVAPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ PEEII+SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NGKIT+
Sbjct: 361 PRMTNTYMLPGEHTPEEIIASVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIENGKITH 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG G +++VSM+GND+ LD GVGVCGK GQ VPVGVGQPTLK+D++TVGGT
Sbjct: 421 PIKGATLIGSGIEAMQQVSMVGNDLALDRGVGVCGKAGQSVPVGVGQPTLKLDALTVGGT 480
Query: 737 N 737
Sbjct: 481 E 481
>gi|54310351|ref|YP_131371.1| TldD, Zn-dependent protease and theirinactivated homologs
[Photobacterium profundum SS9]
gi|46914792|emb|CAG21569.1| putative TldD, Zn-dependent proteases and theirinactivated homologs
[Photobacterium profundum SS9]
Length = 487
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 260/489 (53%), Positives = 346/489 (70%), Gaps = 7/489 (1%)
Query: 254 ISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGI 313
+++ + L + +L L + L KIL + VDYAD YFQ +E+ +LE+ I
Sbjct: 1 MTRAELMSLKTVENTMLTQSGLGREELHKILSMIAVRDVDYADIYFQSCWHESLVLEDSI 60
Query: 314 VKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIK 373
+K G+F+I++GVGVRA++G+KT F YSD I++ L + K+ R I Q G +K
Sbjct: 61 IKDGSFNIDRGVGVRAVAGEKTGFAYSDQINELALTQSAKAARGIVRQ--GGSASVKAFS 118
Query: 374 KIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRND 433
I + +Y+ D + S + +KI LLE +++ R K+P V +V +++G Y+ +L+ D
Sbjct: 119 PISPSGIYAPVDPLGSFDKFQKIALLEEIDRYIRTKEPLVKEVSVSINGVYEQVLVAALD 178
Query: 434 GLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVS-----NSVN 488
G ADIRPLV+L ++++VEK +RE G++G GGRY Y +F K + ++
Sbjct: 179 GTYAADIRPLVRLSISVLVEKGDKRERGSAGGGGRYGYEHFLHEEGGKSAALNFADEAIR 238
Query: 489 SALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASK 548
AL+NLEA+ APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS FS +G+++ S
Sbjct: 239 QALVNLEAEAAPAGTMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSMFSGQMGQQVTSP 298
Query: 549 EITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARR 608
TIVD+GTL +RRGSINIDDEG P Q L+E G LKGY+QD +NARLM + TGN RR
Sbjct: 299 LCTIVDDGTLVDRRGSINIDDEGVPGQYNVLVEGGKLKGYIQDKLNARLMGVDPTGNGRR 358
Query: 609 ESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYI 668
ES+AH+P+PRMTNTYML G+ PEEIISSVK G+YA N GGQVDIT+GKFVFSAS+AY+
Sbjct: 359 ESYAHLPMPRMTNTYMLPGEHTPEEIISSVKKGIYAPNIGGGQVDITSGKFVFSASEAYL 418
Query: 669 IKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKI 728
I+NGKIT P+KGATLIG G +++VSM+GND+ +D GVGVCGK GQ +PVGVGQPTLKI
Sbjct: 419 IENGKITRPIKGATLIGSGVEAMQQVSMVGNDLSIDRGVGVCGKAGQSIPVGVGQPTLKI 478
Query: 729 DSITVGGTN 737
DS+TVGGT
Sbjct: 479 DSMTVGGTE 487
>gi|415765496|ref|ZP_11482765.1| microcin-processing peptidase 2 [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|429732846|ref|ZP_19267424.1| TldD/PmbA family protein [Aggregatibacter actinomycetemcomitans Y4]
gi|348653847|gb|EGY69518.1| microcin-processing peptidase 2 [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|429155284|gb|EKX97971.1| TldD/PmbA family protein [Aggregatibacter actinomycetemcomitans Y4]
Length = 487
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 245/463 (52%), Positives = 331/463 (71%), Gaps = 5/463 (1%)
Query: 280 LLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFY 339
L + + + VDYAD YFQ +++ENW+LE+GI+K G F I++GVGVRA+SG+KT F Y
Sbjct: 25 LPNVFDTLAQRNVDYADLYFQLSQDENWVLEDGIIKEGGFHIDRGVGVRAVSGEKTGFAY 84
Query: 340 SDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLL 399
SD I+ L ++ R IA S + + Y + + S++ +KI+LL
Sbjct: 85 SDQINLANLQQCAQAVRGIAQPSQCNFILPVKFNPVDTTLRYQPINPLHSLSQEQKIELL 144
Query: 400 ERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRRE 459
V++ AR +DPRV++V A LS Y+ IL+ DG + ADIRPL++L V+++VE++G+RE
Sbjct: 145 RLVDRTARAEDPRVVQVNAGLSMVYEEILVAATDGTLAADIRPLIRLSVSVLVEQDGKRE 204
Query: 460 IGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPG 514
G +G GGR+ ++F + + +V AL+NL A APAG+M VVLG GWPG
Sbjct: 205 RGGAGAGGRFALDWFFESYNGEQRVVYFAKEAVRQALVNLSAVAAPAGLMPVVLGAGWPG 264
Query: 515 ILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPT 574
+LLHEA+GHGLEGDFNRK SS F+ IG+ + S TIVD+GTL +RRGS+ +DDEG P+
Sbjct: 265 VLLHEAVGHGLEGDFNRKESSLFTGKIGELVTSPLCTIVDDGTLMDRRGSVTVDDEGVPS 324
Query: 575 QCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEI 634
Q LI+NGIL+ YMQD MNARLM + TGN RRES+AH+P+PRMTNTYML GK E++
Sbjct: 325 QHNVLIKNGILQKYMQDKMNARLMGVQPTGNGRRESYAHLPMPRMTNTYMLAGKDKFEDL 384
Query: 635 ISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKV 694
++SV+ G++A +F GGQVDIT+GKFVFS S+AY+I+ GKIT PVKGATLIG G +++ V
Sbjct: 385 VASVEQGIFAPHFGGGQVDITSGKFVFSTSEAYLIEKGKITKPVKGATLIGSGIEVMQNV 444
Query: 695 SMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
SM+ ++++LD GVG CGK+GQ VPVGVGQP LKID ITVGGTN
Sbjct: 445 SMVADEVELDHGVGTCGKEGQSVPVGVGQPALKIDQITVGGTN 487
>gi|416032332|ref|ZP_11572772.1| U62 family peptidase 2 TldD [Aggregatibacter actinomycetemcomitans
serotype a str. H5P1]
gi|348000192|gb|EGY40987.1| U62 family peptidase 2 TldD [Aggregatibacter actinomycetemcomitans
serotype a str. H5P1]
Length = 487
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 245/463 (52%), Positives = 331/463 (71%), Gaps = 5/463 (1%)
Query: 280 LLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFY 339
L + + + VDYAD YFQ +++ENW+LE+GI+K G F I++GVGVRA+SG+KT F Y
Sbjct: 25 LPNVFDTLAQRNVDYADLYFQLSQDENWVLEDGIIKEGGFHIDRGVGVRAVSGEKTGFAY 84
Query: 340 SDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLL 399
SD I+ L ++ R IA S + + Y + + S++ +KI+LL
Sbjct: 85 SDQINLAYLQQCAQAVRGIAQPSQCNFILPVKFNPVDTTLRYQPINPLHSLSQEQKIELL 144
Query: 400 ERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRRE 459
V++ AR +DPRV++V A LS Y+ IL+ DG + ADIRPL++L V+++VE++G+RE
Sbjct: 145 RLVDRTARAEDPRVVQVNAGLSMVYEEILVAATDGTLAADIRPLIRLSVSVLVEQDGKRE 204
Query: 460 IGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPG 514
G +G GGR+ ++F + + +V AL+NL A APAG+M VVLG GWPG
Sbjct: 205 RGGAGAGGRFALDWFFESYNGEQRVVYFAKEAVRQALVNLSAVAAPAGLMPVVLGAGWPG 264
Query: 515 ILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPT 574
+LLHEA+GHGLEGDFNRK SS F+ IG+ + S TIVD+GTL +RRGS+ +DDEG P+
Sbjct: 265 VLLHEAVGHGLEGDFNRKESSLFTGKIGELVTSPLCTIVDDGTLMDRRGSVTVDDEGVPS 324
Query: 575 QCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEI 634
Q LI+NGIL+ YMQD MNARLM + TGN RRES+AH+P+PRMTNTYML GK E++
Sbjct: 325 QHNVLIKNGILQKYMQDKMNARLMGVQPTGNGRRESYAHLPMPRMTNTYMLAGKDKFEDL 384
Query: 635 ISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKV 694
++SV+ G++A +F GGQVDIT+GKFVFS S+AY+I+ GKIT PVKGATLIG G +++ V
Sbjct: 385 VASVEQGIFAPHFGGGQVDITSGKFVFSTSEAYLIEKGKITKPVKGATLIGSGIEVMQNV 444
Query: 695 SMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
SM+ ++++LD GVG CGK+GQ VPVGVGQP LKID ITVGGTN
Sbjct: 445 SMVADEVELDHGVGTCGKEGQSVPVGVGQPALKIDQITVGGTN 487
>gi|419828997|ref|ZP_14352486.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-1A2]
gi|419831777|ref|ZP_14355244.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-61A2]
gi|422916159|ref|ZP_16950500.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-02A1]
gi|423816119|ref|ZP_17715105.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-55C2]
gi|423848182|ref|ZP_17718891.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-59A1]
gi|423878760|ref|ZP_17722498.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-60A1]
gi|423996581|ref|ZP_17739847.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-02C1]
gi|424015277|ref|ZP_17755127.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-55B2]
gi|424018392|ref|ZP_17758194.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-59B1]
gi|424623765|ref|ZP_18062245.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-50A1]
gi|424628340|ref|ZP_18066649.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-51A1]
gi|424632293|ref|ZP_18070412.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-52A1]
gi|424639173|ref|ZP_18077073.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-56A1]
gi|424647456|ref|ZP_18085136.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-57A1]
gi|443526312|ref|ZP_21092397.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-78A1]
gi|341640992|gb|EGS65566.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-02A1]
gi|408016335|gb|EKG53885.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-50A1]
gi|408021648|gb|EKG58889.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-52A1]
gi|408027760|gb|EKG64712.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-56A1]
gi|408037251|gb|EKG73650.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-57A1]
gi|408059321|gb|EKG94088.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-51A1]
gi|408622186|gb|EKK95174.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-1A2]
gi|408636790|gb|EKL08912.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-55C2]
gi|408644205|gb|EKL15906.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-60A1]
gi|408645308|gb|EKL16964.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-59A1]
gi|408652184|gb|EKL23409.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-61A2]
gi|408854642|gb|EKL94392.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-02C1]
gi|408862155|gb|EKM01697.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-55B2]
gi|408870463|gb|EKM09741.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-59B1]
gi|443455305|gb|ELT19087.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-78A1]
Length = 481
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 254/481 (52%), Positives = 342/481 (71%), Gaps = 7/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N + LL P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 MNQIETALLAPAGLTEQDIADTLSSIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+ GVGVRA+SG+KT F YSD I L + + R IA Q G+ ++ K+ + + Y
Sbjct: 63 DCGVGVRAVSGEKTGFAYSDQIQLEGLKQSAIAARGIAQQ--GQNLTVQAFKRAQHPAFY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + S ++K +LL++++ R K+P + +V +LSG ++ IL+ DG DIR
Sbjct: 121 GAHNPLESWEKQQKTELLKQLDAYIRTKEPLITEVSVSLSGVHEQILVAATDGTYAGDIR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L ++++ +K RRE G++G GGR+ Y+YF I ++ AL+NLEA
Sbjct: 181 PLVRLSISVLAQKGDRRERGSAGGGGRFGYDYFLQEEAGQKIAFSFADEAIRQALVNLEA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS F+ IGK++ S TIVD+G
Sbjct: 241 VAAPAGTMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSVFAGKIGKKVTSSLCTIVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL + RGS+N+DDEG Q LIE GILKGY+QD +NARLM ++ TGN RRES+AH+P+
Sbjct: 301 TLKDLRGSLNVDDEGVSGQYNVLIEKGILKGYIQDKLNARLMGVAPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ PEEII+SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 361 PRMTNTYMLPGEHTPEEIIASVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIENGKITR 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG G +++VSM+GND+ LD GVGVCGK GQ VPVGVGQPTLK+D++TVGGT
Sbjct: 421 PIKGATLIGSGIEAMQQVSMVGNDLALDRGVGVCGKAGQSVPVGVGQPTLKLDALTVGGT 480
Query: 737 N 737
Sbjct: 481 E 481
>gi|307941671|ref|ZP_07657026.1| protein TldD [Roseibium sp. TrichSKD4]
gi|307775279|gb|EFO34485.1| protein TldD [Roseibium sp. TrichSKD4]
Length = 474
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 236/469 (50%), Positives = 329/469 (70%), Gaps = 5/469 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
L+E L + +I G N D + + ++ + E + + G +K N+ +QG G+R
Sbjct: 8 LIEASGLGLEAAKRITGEAL-NGADDGELFVEYKQTEGLVFDNGRLKAANYDTSQGFGLR 66
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A++G+ + ++ DIS+ L A + ++ + +G +LYS + +
Sbjct: 67 AVAGEAAGYAHAGDISEAALKRAADAVSAVKSGHSGAYAAAPTRTN---QALYSDANPLG 123
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
S + +K+KLL+ ++ AR KDPRV +V A+LSG++ V+ I R DG V D+RPLV+L +
Sbjct: 124 SPSFEDKVKLLQEIDAYARQKDPRVRQVTASLSGQWQVVDILRADGHRVRDVRPLVRLNI 183
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTD-MILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
++I + R+E G GCGGR ++ F D + V ++ AL+NLEA PAPAG M VV
Sbjct: 184 SVIAGNDDRQESGMFGCGGREAFDQFIDPQNWQAGVDEALRQALVNLEAVPAPAGTMDVV 243
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LG GWPGILLHEA+GHGLEGDFNRK +SAF+ +G+R+A+ +TIVD+GT+ +RRGS++I
Sbjct: 244 LGAGWPGILLHEAVGHGLEGDFNRKKTSAFAGLMGERVAAPGVTIVDDGTIPDRRGSLSI 303
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG P+ T LIE+GILKGYMQD NARLM M TGN RR+S+AHIP+PRMTNT M+NG
Sbjct: 304 DDEGTPSSRTVLIEDGILKGYMQDRQNARLMGMEPTGNGRRQSYAHIPMPRMTNTVMMNG 363
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
P+EI+ SVK+G+YA +F GGQVDIT+GKFVFS ++AY ++NGKI PVKGA LIG+G
Sbjct: 364 DKDPQEILESVKDGIYAVSFGGGQVDITSGKFVFSCTEAYRVENGKIGAPVKGAMLIGNG 423
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+ L +V+MIGNDMKLDPG+G CGK GQ VPVGVGQP+++I+++TVGGT
Sbjct: 424 PDALTRVTMIGNDMKLDPGLGTCGKQGQGVPVGVGQPSMRINALTVGGT 472
>gi|209694085|ref|YP_002262013.1| protein TldD [Aliivibrio salmonicida LFI1238]
gi|208008036|emb|CAQ78175.1| protein TldD [Aliivibrio salmonicida LFI1238]
Length = 481
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 254/475 (53%), Positives = 351/475 (73%), Gaps = 9/475 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL + ++ L + L ++ K VDYAD YFQ +E+ +LE+ I+K G+F+I++GVG+R
Sbjct: 10 LLNQAGIGQQELSQTLSSIAKRDVDYADIYFQSCWHESLVLEDSIIKDGSFNIDRGVGIR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSLYSFTDTI 387
A++G+KT F YSD I+ + L + K+ R I Q +GK+ I Y+ + +
Sbjct: 70 AVAGEKTGFAYSDQINLDALKQSAKAARGIVQQGGSGKVNAFT---AQPIPQFYAPMNPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
+S++ ++KI LL+ V+ R K+P + +V ++SG Y+ +L+ DG ADIRPLV+L
Sbjct: 127 NSLDKQKKIALLQEVDVYIRAKEPLIQEVSVSISGVYEQMLVAALDGTYAADIRPLVRLS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVS-----NSVNSALINLEAKPAPAG 502
++++V++ +RE G++G GGRY Y+YF + K ++ ++ AL+NL+A+ APAG
Sbjct: 187 ISVLVQRGDKRERGSAGGGGRYGYDYFLTEVDGKSIALEFADEAIRQALVNLDAEAAPAG 246
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
+M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS FS +G ++ S TIVD+GT+ +RR
Sbjct: 247 MMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSVFSGKLGDKVTSSVCTIVDDGTMLDRR 306
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+N+DDEG P Q TLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNT
Sbjct: 307 GSLNVDDEGVPGQYNTLIENGVLKGYMQDKLNARLMGVAPTGNGRRESYAHLPMPRMTNT 366
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML G+ PEEIIS+VK G+YA NF GGQVDIT+GKFVFSAS+AY+I++GKIT PVKGAT
Sbjct: 367 YMLPGEHTPEEIISTVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIEDGKITRPVKGAT 426
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
LIG G ++++SM+GND+ LD GVGVCGK GQ VPVGVGQPTLK+D++TVGGT
Sbjct: 427 LIGSGIEAMQQISMVGNDLSLDRGVGVCGKAGQSVPVGVGQPTLKLDALTVGGTE 481
>gi|424635381|ref|ZP_18073405.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-55A1]
gi|408027847|gb|EKG64793.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-55A1]
Length = 479
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 254/481 (52%), Positives = 342/481 (71%), Gaps = 7/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N + LL P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 1 MNQIETALLAPAGLTEQDIADTLSSIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 60
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+ GVGVRA+SG+KT F YSD I L + + R IA Q G+ ++ K+ + + Y
Sbjct: 61 DCGVGVRAVSGEKTGFAYSDQIQLEGLKQSAIAARGIAQQ--GQNLTVQAFKRAQHPAFY 118
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + S ++K +LL++++ R K+P + +V +LSG ++ IL+ DG DIR
Sbjct: 119 GAHNPLESWEKQQKTELLKQLDAYIRTKEPLITEVSVSLSGVHEQILVAATDGTYAGDIR 178
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L ++++ +K RRE G++G GGR+ Y+YF I ++ AL+NLEA
Sbjct: 179 PLVRLSISVLAQKGDRRERGSAGGGGRFGYDYFLQEEAGQKIAFSFADEAIRQALVNLEA 238
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS F+ IGK++ S TIVD+G
Sbjct: 239 VAAPAGTMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSVFAGKIGKKVTSSLCTIVDDG 298
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL + RGS+N+DDEG Q LIE GILKGY+QD +NARLM ++ TGN RRES+AH+P+
Sbjct: 299 TLKDLRGSLNVDDEGVSGQYNVLIEKGILKGYIQDKLNARLMGVAPTGNGRRESYAHLPM 358
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ PEEII+SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 359 PRMTNTYMLPGEHTPEEIIASVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIENGKITR 418
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG G +++VSM+GND+ LD GVGVCGK GQ VPVGVGQPTLK+D++TVGGT
Sbjct: 419 PIKGATLIGSGIEAMQQVSMVGNDLALDRGVGVCGKAGQSVPVGVGQPTLKLDALTVGGT 478
Query: 737 N 737
Sbjct: 479 E 479
>gi|84394049|ref|ZP_00992786.1| TldD protein [Vibrio splendidus 12B01]
gi|84375335|gb|EAP92245.1| TldD protein [Vibrio splendidus 12B01]
Length = 481
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 255/481 (53%), Positives = 344/481 (71%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N LL P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 INQIEEALLNPTGLTEQNIADTLASIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSL 380
+ G+GVRA+SG+KT F YSD I + L + + R IA Q NGK++ K +
Sbjct: 63 DCGLGVRAVSGEKTGFAYSDQIQLDGLKQSAIAARGIAKQGQNGKVQAFKRNSN---QAY 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y + ++S ++K +LL+ ++ R K+P V +V +LSG ++ +L+ DG DI
Sbjct: 120 YDAVNPLASWEKQQKTELLKALDAYIRTKEPMVTEVSVSLSGVHEQMLVAATDGTFAGDI 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L ++++ +K RRE G++G GGR+ Y++F + + ++ AL+NLE
Sbjct: 180 RPLVRLSISVLAQKGDRRERGSAGGGGRFGYDFFLSDANGSQVAYQFADEAIRQALVNLE 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNRK SS FS +G+++ S TIVD+
Sbjct: 240 AVAAPAGAMPVVLGSGWPGVLLHEAVGHGLEGDFNRKESSVFSGKVGEQVTSSLCTIVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTL + RGS+N+DDEG Q TLIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTLTDLRGSLNVDDEGVNGQYNTLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G+ PEEIIS+V+ G+YA NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 360 MPRMTNTYMLPGEHTPEEIISTVERGIYAPNFGGGQVDITSGKFVFSASEAYMIENGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
+PVKGATLIG G +++VSM+GND+ LD GVGVCGK GQ VPVGVGQPTLK+DS+TVGG
Sbjct: 420 HPVKGATLIGSGIEAMQQVSMVGNDLSLDRGVGVCGKAGQSVPVGVGQPTLKLDSLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|384263192|ref|YP_005418380.1| hypothetical protein RSPPHO_02784 [Rhodospirillum photometricum DSM
122]
gi|378404294|emb|CCG09410.1| Putative uncharacterized protein [Rhodospirillum photometricum DSM
122]
Length = 485
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 233/464 (50%), Positives = 329/464 (70%), Gaps = 6/464 (1%)
Query: 275 LDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDK 334
LD +++ + + D + + + E+ LE+G ++ + +QG G+RA+SG+
Sbjct: 22 LDPDQTARLVAHALEG-ADDGELFLERRHGESLSLEDGKIRQAGYDSSQGFGLRAVSGEA 80
Query: 335 TAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIRE 394
F ++ ++ ++L A ++ R++ ++G++ + ++ LY+ + + +
Sbjct: 81 VGFAHASVLTLDSLARAAETVRAVRQGASGRVALAP---RVAPQRLYTPDNPLEGVPFAA 137
Query: 395 KIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVE- 453
K+ LL ++ AR +DPRV++V+A+L+G + + I R DG DIRPLV+L V ++VE
Sbjct: 138 KVDLLAAMDAYARDRDPRVVQVMASLTGSWQAVRIVRADGPGAGDIRPLVRLNVAVVVED 197
Query: 454 KNGRREIGNSGCGGRYNYN-YFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGW 512
GRRE G+ G GGR Y+ + + +K V+ ++ AL++LEA APAG M VVLGPGW
Sbjct: 198 AAGRRETGSHGLGGRLLYDGVMVESVWQKAVNEALRQALVSLEAIDAPAGEMPVVLGPGW 257
Query: 513 PGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGN 572
PG+LLHEAIGHGLEGD NRKG+SAFS IG+RIA+ +TIVD+GT+ RRGS+N+DDEG
Sbjct: 258 PGVLLHEAIGHGLEGDGNRKGTSAFSQGIGRRIAAPGVTIVDDGTVPGRRGSLNVDDEGT 317
Query: 573 PTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPE 632
PT T +IE+GIL GY+QD +NARLM M+ TGN RR+S AH+P+PRMTNT+ML G P
Sbjct: 318 PTARTVIIEDGILTGYLQDRLNARLMGMAPTGNGRRQSHAHVPLPRMTNTFMLAGTDAPA 377
Query: 633 EIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILK 692
+II+SVK GLYA NF GGQVD T+GKFVFSAS+AY+I+NG++ PVKGATLIG+GP++L
Sbjct: 378 DIIASVKKGLYAVNFGGGQVDTTSGKFVFSASEAYLIENGRLGAPVKGATLIGNGPDVLT 437
Query: 693 KVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
VSMIGND+ LDPG+G CGK+GQ VPVGVGQPTLK+D +TVGGT
Sbjct: 438 HVSMIGNDLALDPGIGTCGKEGQGVPVGVGQPTLKVDLLTVGGT 481
>gi|262172486|ref|ZP_06040164.1| TldD protein probably a protease [Vibrio mimicus MB-451]
gi|261893562|gb|EEY39548.1| TldD protein probably a protease [Vibrio mimicus MB-451]
Length = 481
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 253/481 (52%), Positives = 341/481 (70%), Gaps = 7/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N + LL P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 MNHIEAALLAPTGLSEQDIADTLSSIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+ GVGVRA+SG+KT F YSD I L + + R IA Q G+ ++ K+ + Y
Sbjct: 63 DCGVGVRAVSGEKTGFAYSDQIQLEGLKQSAIAARGIAQQ--GQSLTVQAFKRAQHPQFY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + S ++K +LL++++ R K+P + +V +LSG ++ IL+ DG DIR
Sbjct: 121 GANNPLESWEKQQKTELLKQLDAYIRTKEPLITEVSVSLSGVHEQILVAATDGTYAGDIR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L ++++ +K RRE G++G GGR+ Y+YF I ++ AL+NLEA
Sbjct: 181 PLVRLSISVLAQKGDRRERGSAGGGGRFGYDYFLQEEAGQKIAFSFADEAIRQALVNLEA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS F+ +GK++ S TIVD+G
Sbjct: 241 VAAPAGTMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSVFAGKVGKKVTSDLCTIVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL + RGS+N+DDEG Q LIE GILKGY+QD +NARLM ++ TGN RRES+AH+P+
Sbjct: 301 TLKDLRGSLNVDDEGVSGQYNVLIEKGILKGYIQDKLNARLMGVAPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ PEEII+SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 361 PRMTNTYMLPGEHTPEEIIASVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIENGKITR 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG G +++VSM+GND+ LD GVGVCGK GQ VPVGVGQPTLK+D++TVGGT
Sbjct: 421 PIKGATLIGSGIEAMQQVSMVGNDLALDRGVGVCGKAGQSVPVGVGQPTLKLDALTVGGT 480
Query: 737 N 737
Sbjct: 481 E 481
>gi|343502302|ref|ZP_08740159.1| hypothetical protein VITU9109_08236 [Vibrio tubiashii ATCC 19109]
gi|418480094|ref|ZP_13049160.1| tldD protein [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
gi|342815039|gb|EGU49968.1| hypothetical protein VITU9109_08236 [Vibrio tubiashii ATCC 19109]
gi|384572287|gb|EIF02807.1| tldD protein [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
Length = 481
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 253/481 (52%), Positives = 343/481 (71%), Gaps = 7/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N LL+P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 INYVEDALLKPAGLSEQDIADTLASIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVGVRA++G+KT F YSD I L + + R IA Q G+ ++ K+ S Y
Sbjct: 63 DRGVGVRAVTGEKTGFAYSDQIQLEGLTQSAIAARGIAQQ--GQNDQVQAFKRSDNQSYY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + S +K +LL+ ++ R K+P + +V +LSG ++ +L+ DG D+R
Sbjct: 121 DTANPLESWEKEQKTQLLKELDAYIRTKEPMIKEVSISLSGVHEQMLVAATDGTYAGDVR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTD-----MILEKCVSNSVNSALINLEA 496
PLV+L ++++ +K RRE G+SG GGR+ Y++F + ++ AL+NLEA
Sbjct: 181 PLVRLSISVLAQKGDRRERGSSGGGGRFGYDFFLTEEQGAKVAYHYADEAIRMALVNLEA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS FS +G+++ S+ TIVD+G
Sbjct: 241 DAAPAGMMPVVLGSGWPGVLLHEAVGHGLEGDFNRKESSVFSGKVGEKVTSELCTIVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL + RGS+N+DDEG Q TLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+
Sbjct: 301 TLKDLRGSLNVDDEGVNGQYNTLIENGVLKGYMQDKLNARLMGVNPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ PEEIIS+VK GLYA NF GGQVDIT+GKFVFSAS+AY+I++GKIT
Sbjct: 361 PRMTNTYMLPGQHTPEEIISTVKKGLYAPNFGGGQVDITSGKFVFSASEAYLIEDGKITR 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G +++VSM+GND+ +D GVGVCGK GQ VPVGVGQPTLK+DSITVGGT
Sbjct: 421 PVKGATLIGSGIEAMQQVSMVGNDLSIDRGVGVCGKAGQSVPVGVGQPTLKLDSITVGGT 480
Query: 737 N 737
Sbjct: 481 E 481
>gi|153825646|ref|ZP_01978313.1| tldD protein [Vibrio cholerae MZO-2]
gi|417823558|ref|ZP_12470150.1| modulator of DNA gyrase family protein [Vibrio cholerae HE48]
gi|149740676|gb|EDM54783.1| tldD protein [Vibrio cholerae MZO-2]
gi|340048187|gb|EGR09109.1| modulator of DNA gyrase family protein [Vibrio cholerae HE48]
Length = 481
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 253/481 (52%), Positives = 342/481 (71%), Gaps = 7/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N + LL P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 MNQIETALLAPAGLTEQDIADTLSSIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+ GVGVRA+SG+KT F YSD I L + + R IA Q G+ ++ K+ + + Y
Sbjct: 63 DCGVGVRAVSGEKTGFAYSDQIQLEGLKQSAIAARGIAQQ--GQNLTVQAFKRAQHPAFY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + S ++K +LL++++ R K+P + +V +LSG ++ IL+ DG DIR
Sbjct: 121 GAHNPLESWEKQQKTELLKQLDAYIRTKEPLITEVSVSLSGVHEQILVAATDGTYAGDIR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L ++++ +K RRE G++G GGR+ Y+YF I ++ AL+NLEA
Sbjct: 181 PLVRLSISVLAQKGDRRERGSAGGGGRFGYDYFLQEEAGQKIAFSFADEAIRQALVNLEA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS F+ +GK++ S TIVD+G
Sbjct: 241 VAAPAGTMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSVFAGKVGKKVTSSLCTIVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL + RGS+N+DDEG Q LIE GILKGY+QD +NARLM ++ TGN RRES+AH+P+
Sbjct: 301 TLKDLRGSLNVDDEGVSGQYNVLIEKGILKGYIQDKLNARLMGVAPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ PEEII+SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 361 PRMTNTYMLPGEHTPEEIIASVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIENGKITR 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG G +++VSM+GND+ LD GVGVCGK GQ VPVGVGQPTLK+D++TVGGT
Sbjct: 421 PIKGATLIGSGIEAMQQVSMVGNDLALDRGVGVCGKAGQSVPVGVGQPTLKLDALTVGGT 480
Query: 737 N 737
Sbjct: 481 E 481
>gi|225874188|ref|YP_002755647.1| tldD protein [Acidobacterium capsulatum ATCC 51196]
gi|225794356|gb|ACO34446.1| tldD protein [Acidobacterium capsulatum ATCC 51196]
Length = 475
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 240/473 (50%), Positives = 324/473 (68%), Gaps = 3/473 (0%)
Query: 266 RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGV 325
+ E F + E++L + LG DYAD YF+ + L+E IVKT + ++ G
Sbjct: 4 KQYFFEKFGITERLLERCLGEALSAGGDYADLYFESVTASSIGLDESIVKTASHGVSAGC 63
Query: 326 GVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTD 385
G+R +SG++T + Y+DD+S + L+ A ++ IA S + ++ + + SLY
Sbjct: 64 GIRVLSGERTGYAYTDDLSADRLLRAARTAALIA--SGPAKQPVQGFTETRTPSLYPVPG 121
Query: 386 TISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQ 445
+ I+I K+ LL R +K+AR D R+ +V A+ + E ILI +DG +D +PL +
Sbjct: 122 AEADIDITAKLNLLHRADKVARGYDSRITQVRASYADELRRILIAASDGTFASDTQPLAR 181
Query: 446 LFVTIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIM 504
+ V ++ + + R G SG GGR +YF T+ E + +AL+ L A APAG M
Sbjct: 182 MNVFVLAKNDERTAQGTSGGGGRVEIDYFETEKTPEHFAREAARTALLQLGAVAAPAGEM 241
Query: 505 KVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGS 564
+VVLGPGWPG+LLHEA+GHGLE DFNRK +SAF+ IG+ +AS+++T+VDNGTL NRRGS
Sbjct: 242 EVVLGPGWPGVLLHEAVGHGLEADFNRKKTSAFAGLIGRPVASEKVTVVDNGTLKNRRGS 301
Query: 565 INIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYM 624
+N+DDEG+ TQ T LIENGILKGYM D ++ARLM M TGN RRES+ IP+PRMTNTYM
Sbjct: 302 LNVDDEGSATQETVLIENGILKGYMSDKLSARLMKMPHTGNGRRESYQQIPMPRMTNTYM 361
Query: 625 LNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLI 684
L G+ PE+I+ SVK GLYA NF GG VDIT GKFVFSAS+AY+I++GK+T PV+ ATLI
Sbjct: 362 LAGEDAPEDILRSVKRGLYAVNFGGGSVDITTGKFVFSASEAYLIEDGKVTAPVRDATLI 421
Query: 685 GHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
G+GP LK VSM+G+D+ LD GVG CGKDGQ VPVGVG PT+K+D +TVGGT
Sbjct: 422 GNGPEALKYVSMVGHDLALDEGVGTCGKDGQSVPVGVGMPTVKLDRMTVGGTG 474
>gi|218708388|ref|YP_002416009.1| peptidase [Vibrio splendidus LGP32]
gi|218321407|emb|CAV17357.1| putative peptidase [Vibrio splendidus LGP32]
Length = 481
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 255/481 (53%), Positives = 344/481 (71%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N LL P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 INQIEEALLNPTGLTEQNIADTLASIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSL 380
+ GVGVRA+SG+KT F YSD I + L + + R IA Q NGK++ K +
Sbjct: 63 DCGVGVRAVSGEKTGFAYSDQIQLDGLKQSAIAARGIAKQGQNGKVQAFKRNSN---QAY 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y + ++S ++K +LL+ ++ R K+P V +V +LSG ++ +L+ DG DI
Sbjct: 120 YDAVNPLASWEKQQKTELLKALDAYIRTKEPMVTEVSVSLSGVHEQMLVAATDGTFAGDI 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L ++++ +K RRE G++G GGR+ Y++F + + ++ AL+NLE
Sbjct: 180 RPLVRLSISVLAQKGDRRERGSAGGGGRFGYDFFLSDANGSQVAYQFADEAIRQALVNLE 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNRK SS FS IG+++ S TIVD+
Sbjct: 240 AVAAPAGAMPVVLGSGWPGVLLHEAVGHGLEGDFNRKESSVFSGKIGEQVTSSLCTIVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTL + RGS+N+DDEG Q TLIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTLTDLRGSLNVDDEGVNGQYNTLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G+ PEEII++V+ G+YA NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 360 MPRMTNTYMLPGEHTPEEIIATVEKGIYAPNFGGGQVDITSGKFVFSASEAYMIENGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
+PVKGATLIG G +++VSM+GND+ +D GVGVCGK GQ VPVGVGQPTLK+DS+TVGG
Sbjct: 420 HPVKGATLIGSGIEAMQQVSMVGNDLSIDRGVGVCGKAGQSVPVGVGQPTLKLDSLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|418354440|ref|ZP_12957164.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-61A1]
gi|423159109|ref|ZP_17146083.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-33A2]
gi|424620833|ref|ZP_18059364.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-47A1]
gi|424655520|ref|ZP_18092826.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-81A2]
gi|443534120|ref|ZP_21100040.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-80A1]
gi|356450558|gb|EHI03277.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-33A2]
gi|356454216|gb|EHI06871.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-61A1]
gi|395975752|gb|EJH85229.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-47A1]
gi|408057621|gb|EKG92461.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-81A2]
gi|443462701|gb|ELT33732.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-80A1]
Length = 479
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 253/481 (52%), Positives = 342/481 (71%), Gaps = 7/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N + LL P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 1 MNQIETALLAPAGLTEQDIADTLSSIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 60
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+ GVGVRA+SG+KT F YSD I L + + R IA Q G+ ++ K+ + + Y
Sbjct: 61 DCGVGVRAVSGEKTGFAYSDQIQLEGLKQSAIAARGIAQQ--GQNLTVQAFKRAQHPAFY 118
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + S ++K +LL++++ R K+P + +V +LSG ++ IL+ DG DIR
Sbjct: 119 GAHNPLESWEKQQKTELLKQLDAYIRTKEPLITEVSVSLSGVHEQILVAATDGTYAGDIR 178
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L ++++ +K RRE G++G GGR+ Y+YF I ++ AL+NLEA
Sbjct: 179 PLVRLSISVLAQKGDRRERGSAGGGGRFGYDYFLQEEAGQKIAFSFADEAIRQALVNLEA 238
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS F+ +GK++ S TIVD+G
Sbjct: 239 VAAPAGTMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSVFAGKVGKKVTSDLCTIVDDG 298
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL + RGS+N+DDEG Q LIE GILKGY+QD +NARLM ++ TGN RRES+AH+P+
Sbjct: 299 TLKDLRGSLNVDDEGVSGQYNVLIEKGILKGYIQDKLNARLMGVAPTGNGRRESYAHLPM 358
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ PEEII+SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 359 PRMTNTYMLPGEHTPEEIIASVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIENGKITR 418
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG G +++VSM+GND+ LD GVGVCGK GQ VPVGVGQPTLK+D++TVGGT
Sbjct: 419 PIKGATLIGSGIEAMQQVSMVGNDLALDRGVGVCGKAGQSVPVGVGQPTLKLDALTVGGT 478
Query: 737 N 737
Sbjct: 479 E 479
>gi|422305851|ref|ZP_16393038.1| modulator of DNA gyrase family protein [Vibrio cholerae CP1035(8)]
gi|408627955|gb|EKL00739.1| modulator of DNA gyrase family protein [Vibrio cholerae CP1035(8)]
Length = 481
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 252/481 (52%), Positives = 342/481 (71%), Gaps = 7/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N + LL P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 MNQIETALLAPAGLTEQDIADTLSSIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+ GVGVRA+SG+KT F YSD I L + + R IA Q G+ ++ K+ + + Y
Sbjct: 63 DCGVGVRAVSGEKTGFAYSDQIQLEGLKQSAIAARGIAQQ--GQNLTVQAFKRAQHPAFY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + S ++K +LL++++ R K+P + +V +LSG ++ IL+ DG D+R
Sbjct: 121 GAHNPLESWEKQQKTELLKQLDAYIRTKEPLITEVSVSLSGVHEQILVAATDGTYAGDVR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L ++++ +K RRE G++G GGR+ Y+YF I ++ AL+NLEA
Sbjct: 181 PLVRLSISVLAQKGDRRERGSAGGGGRFGYDYFLQEEAGQKIAFSFADEAIRQALVNLEA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS F+ +GK++ S TIVD+G
Sbjct: 241 VAAPAGTMTVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSVFAGKVGKKVTSDLCTIVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL + RGS+N+DDEG Q LIE GILKGY+QD +NARLM ++ TGN RRES+AH+P+
Sbjct: 301 TLKDLRGSLNVDDEGVSGQYNVLIEKGILKGYIQDKLNARLMGVAPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ PEEII+SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 361 PRMTNTYMLPGEHTPEEIIASVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIENGKITR 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG G +++VSM+GND+ LD GVGVCGK GQ VPVGVGQPTLK+D++TVGGT
Sbjct: 421 PIKGATLIGSGIEAMQQVSMVGNDLALDRGVGVCGKAGQSVPVGVGQPTLKLDALTVGGT 480
Query: 737 N 737
Sbjct: 481 E 481
>gi|343515004|ref|ZP_08752068.1| hypothetical protein VIBRN418_11540 [Vibrio sp. N418]
gi|342799148|gb|EGU34728.1| hypothetical protein VIBRN418_11540 [Vibrio sp. N418]
Length = 481
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 257/481 (53%), Positives = 344/481 (71%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N LL+P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 INHVEDALLKPGGLTEQDIANTLESIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSL 380
+ G+GVRA++G+KT F YSD I + L + + R IA Q NGK++ K +
Sbjct: 63 DCGLGVRAVTGEKTGFAYSDQIQLDGLKQSAIAARGIAQQGQNGKVQAFKRFDN---QAY 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ + ++ +K LL+ ++ R K+P + +V +LSG ++ +L+ DG D+
Sbjct: 120 YAAVNPLNCWEKEKKTALLKELDAYIRTKEPLIEEVSISLSGLHEQMLVAATDGTYAGDV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVS-----NSVNSALINLE 495
RPLV+L +T++ +K RRE G+SG GGR+NY+YF I + V+ ++ AL+NLE
Sbjct: 180 RPLVRLSITVLAQKGDRRERGSSGGGGRFNYDYFLTSIEGQNVAYQYADEAIRMALVNLE 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNRK SS FS IG+++ S TIVD+
Sbjct: 240 ADAAPAGTMPVVLGSGWPGVLLHEAVGHGLEGDFNRKESSVFSGRIGEKVTSNLCTIVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTL + RGS+N+DDEG Q TLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTLKDLRGSLNVDDEGVAGQYNTLIENGVLKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G+ PEEIIS+VK GLYA NF GGQVDIT+GKFVFS S+AY+I+NGKIT
Sbjct: 360 MPRMTNTYMLPGQHTPEEIISTVKKGLYAPNFGGGQVDITSGKFVFSTSEAYLIENGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G +++VSM+GND+ +D GVG+CGK GQ VPVGVGQPTLK+DSITVGG
Sbjct: 420 RPVKGATLIGSGLEAMQQVSMVGNDLSIDRGVGICGKAGQSVPVGVGQPTLKLDSITVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|15640449|ref|NP_230076.1| tldD protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121590782|ref|ZP_01678111.1| tldD protein [Vibrio cholerae 2740-80]
gi|121727248|ref|ZP_01680407.1| tldD protein [Vibrio cholerae V52]
gi|147675411|ref|YP_001218691.1| tldD protein [Vibrio cholerae O395]
gi|153217094|ref|ZP_01950858.1| tldD protein [Vibrio cholerae 1587]
gi|153819556|ref|ZP_01972223.1| tldD protein [Vibrio cholerae NCTC 8457]
gi|153822589|ref|ZP_01975256.1| tldD protein [Vibrio cholerae B33]
gi|153830414|ref|ZP_01983081.1| tldD protein [Vibrio cholerae 623-39]
gi|227080633|ref|YP_002809184.1| tldD protein [Vibrio cholerae M66-2]
gi|227116826|ref|YP_002818722.1| tldD protein [Vibrio cholerae O395]
gi|229507062|ref|ZP_04396568.1| TldD protein probably a protease [Vibrio cholerae BX 330286]
gi|229508783|ref|ZP_04398275.1| TldD protein probably a protease [Vibrio cholerae B33]
gi|229512647|ref|ZP_04402116.1| TldD protein probably a protease [Vibrio cholerae TMA 21]
gi|229519771|ref|ZP_04409214.1| TldD protein probably a protease [Vibrio cholerae RC9]
gi|229525116|ref|ZP_04414521.1| TldD protein probably a protease [Vibrio cholerae bv. albensis
VL426]
gi|229606297|ref|YP_002876945.1| TldD protein probably a protease [Vibrio cholerae MJ-1236]
gi|254225999|ref|ZP_04919599.1| tldD protein [Vibrio cholerae V51]
gi|254850654|ref|ZP_05240004.1| tldD protein [Vibrio cholerae MO10]
gi|255743807|ref|ZP_05417764.1| TldD protein probably a protease [Vibrio cholera CIRS 101]
gi|262153580|ref|ZP_06028708.1| TldD protein probably a protease [Vibrio cholerae INDRE 91/1]
gi|262167614|ref|ZP_06035318.1| TldD protein probably a protease [Vibrio cholerae RC27]
gi|298501045|ref|ZP_07010846.1| tldD protein [Vibrio cholerae MAK 757]
gi|360037060|ref|YP_004938823.1| TldD protein [Vibrio cholerae O1 str. 2010EL-1786]
gi|379740297|ref|YP_005332266.1| TldD protein [Vibrio cholerae IEC224]
gi|417812405|ref|ZP_12459065.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-49A2]
gi|417815269|ref|ZP_12461903.1| modulator of DNA gyrase family protein [Vibrio cholerae HCUF01]
gi|418331128|ref|ZP_12942078.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-06A1]
gi|418336287|ref|ZP_12945186.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-23A1]
gi|418342667|ref|ZP_12949468.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-28A1]
gi|418347831|ref|ZP_12952567.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-43A1]
gi|419824894|ref|ZP_14348401.1| modulator of DNA gyrase family protein [Vibrio cholerae CP1033(6)]
gi|421315665|ref|ZP_15766237.1| modulator of DNA gyrase family protein [Vibrio cholerae CP1032(5)]
gi|421319210|ref|ZP_15769769.1| modulator of DNA gyrase family protein [Vibrio cholerae CP1038(11)]
gi|421323243|ref|ZP_15773772.1| modulator of DNA gyrase family protein [Vibrio cholerae CP1041(14)]
gi|421327650|ref|ZP_15778166.1| modulator of DNA gyrase family protein [Vibrio cholerae CP1042(15)]
gi|421330649|ref|ZP_15781131.1| modulator of DNA gyrase family protein [Vibrio cholerae CP1046(19)]
gi|421334246|ref|ZP_15784716.1| modulator of DNA gyrase family protein [Vibrio cholerae CP1048(21)]
gi|421338146|ref|ZP_15788585.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-20A2]
gi|421345711|ref|ZP_15796096.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-46A1]
gi|422890462|ref|ZP_16932887.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-40A1]
gi|422901261|ref|ZP_16936639.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-48A1]
gi|422905445|ref|ZP_16940303.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-70A1]
gi|422912165|ref|ZP_16946695.1| modulator of DNA gyrase family protein [Vibrio cholerae HFU-02]
gi|422924645|ref|ZP_16957683.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-38A1]
gi|423143692|ref|ZP_17131310.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-19A1]
gi|423148676|ref|ZP_17136037.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-21A1]
gi|423152466|ref|ZP_17139668.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-22A1]
gi|423155250|ref|ZP_17142389.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-32A1]
gi|423163787|ref|ZP_17150583.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-48B2]
gi|423729808|ref|ZP_17703129.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-17A1]
gi|423747028|ref|ZP_17711316.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-50A2]
gi|423891638|ref|ZP_17725330.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-62A1]
gi|423926414|ref|ZP_17729947.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-77A1]
gi|424000969|ref|ZP_17744062.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-17A2]
gi|424005129|ref|ZP_17748117.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-37A1]
gi|424022924|ref|ZP_17762591.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-62B1]
gi|424025942|ref|ZP_17765562.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-69A1]
gi|424589699|ref|ZP_18029146.1| modulator of DNA gyrase family protein [Vibrio cholerae CP1037(10)]
gi|424593944|ref|ZP_18033287.1| modulator of DNA gyrase family protein [Vibrio cholerae CP1040(13)]
gi|424597879|ref|ZP_18037081.1| modulator of DNA gyrase family protein [Vibrio Cholerae CP1044(17)]
gi|424600643|ref|ZP_18039802.1| modulator of DNA gyrase family protein [Vibrio cholerae CP1047(20)]
gi|424605559|ref|ZP_18044527.1| modulator of DNA gyrase family protein [Vibrio cholerae CP1050(23)]
gi|424609276|ref|ZP_18048139.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-39A1]
gi|424612194|ref|ZP_18051005.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-41A1]
gi|424616072|ref|ZP_18054767.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-42A1]
gi|424643652|ref|ZP_18081410.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-56A2]
gi|424651573|ref|ZP_18089101.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-57A2]
gi|440708627|ref|ZP_20889289.1| TldD protein probably a protease [Vibrio cholerae 4260B]
gi|443502471|ref|ZP_21069464.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-64A1]
gi|443506378|ref|ZP_21073176.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-65A1]
gi|443510214|ref|ZP_21076886.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-67A1]
gi|443514050|ref|ZP_21080595.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-68A1]
gi|443517863|ref|ZP_21084286.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-71A1]
gi|443522445|ref|ZP_21088695.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-72A2]
gi|443530350|ref|ZP_21096366.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-7A1]
gi|443537704|ref|ZP_21103561.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-81A1]
gi|449054348|ref|ZP_21733016.1| TldD protein, part of proposed TldE/TldD proteolytic complex
[Vibrio cholerae O1 str. Inaba G4222]
gi|9654844|gb|AAF93595.1| tldD protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121547384|gb|EAX57498.1| tldD protein [Vibrio cholerae 2740-80]
gi|121630367|gb|EAX62762.1| tldD protein [Vibrio cholerae V52]
gi|124113874|gb|EAY32694.1| tldD protein [Vibrio cholerae 1587]
gi|125621455|gb|EAZ49789.1| tldD protein [Vibrio cholerae V51]
gi|126509892|gb|EAZ72486.1| tldD protein [Vibrio cholerae NCTC 8457]
gi|126519893|gb|EAZ77116.1| tldD protein [Vibrio cholerae B33]
gi|146317294|gb|ABQ21833.1| tldD protein [Vibrio cholerae O395]
gi|148874116|gb|EDL72251.1| tldD protein [Vibrio cholerae 623-39]
gi|227008521|gb|ACP04733.1| tldD protein [Vibrio cholerae M66-2]
gi|227012276|gb|ACP08486.1| tldD protein [Vibrio cholerae O395]
gi|229338697|gb|EEO03714.1| TldD protein probably a protease [Vibrio cholerae bv. albensis
VL426]
gi|229344460|gb|EEO09435.1| TldD protein probably a protease [Vibrio cholerae RC9]
gi|229350324|gb|EEO15275.1| TldD protein probably a protease [Vibrio cholerae TMA 21]
gi|229354186|gb|EEO19117.1| TldD protein probably a protease [Vibrio cholerae B33]
gi|229355807|gb|EEO20727.1| TldD protein probably a protease [Vibrio cholerae BX 330286]
gi|229368952|gb|ACQ59375.1| TldD protein probably a protease [Vibrio cholerae MJ-1236]
gi|254846359|gb|EET24773.1| tldD protein [Vibrio cholerae MO10]
gi|255738556|gb|EET93944.1| TldD protein probably a protease [Vibrio cholera CIRS 101]
gi|262023950|gb|EEY42647.1| TldD protein probably a protease [Vibrio cholerae RC27]
gi|262030607|gb|EEY49243.1| TldD protein probably a protease [Vibrio cholerae INDRE 91/1]
gi|297540293|gb|EFH76353.1| tldD protein [Vibrio cholerae MAK 757]
gi|340043255|gb|EGR04214.1| modulator of DNA gyrase family protein [Vibrio cholerae HCUF01]
gi|340043785|gb|EGR04742.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-49A2]
gi|341625777|gb|EGS51204.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-70A1]
gi|341627149|gb|EGS52475.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-48A1]
gi|341627703|gb|EGS53003.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-40A1]
gi|341641352|gb|EGS65908.1| modulator of DNA gyrase family protein [Vibrio cholerae HFU-02]
gi|341648703|gb|EGS72744.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-38A1]
gi|356421618|gb|EHH75112.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-06A1]
gi|356422084|gb|EHH75568.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-21A1]
gi|356426891|gb|EHH80174.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-19A1]
gi|356433068|gb|EHH86261.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-23A1]
gi|356434838|gb|EHH88005.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-22A1]
gi|356438128|gb|EHH91179.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-28A1]
gi|356443512|gb|EHH96333.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-32A1]
gi|356447942|gb|EHI00727.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-43A1]
gi|356456512|gb|EHI09110.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-48B2]
gi|356648214|gb|AET28269.1| TldD protein [Vibrio cholerae O1 str. 2010EL-1786]
gi|378793807|gb|AFC57278.1| TldD protein [Vibrio cholerae IEC224]
gi|395922406|gb|EJH33222.1| modulator of DNA gyrase family protein [Vibrio cholerae CP1032(5)]
gi|395923088|gb|EJH33900.1| modulator of DNA gyrase family protein [Vibrio cholerae CP1041(14)]
gi|395925535|gb|EJH36332.1| modulator of DNA gyrase family protein [Vibrio cholerae CP1038(11)]
gi|395931384|gb|EJH42129.1| modulator of DNA gyrase family protein [Vibrio cholerae CP1042(15)]
gi|395934502|gb|EJH45240.1| modulator of DNA gyrase family protein [Vibrio cholerae CP1046(19)]
gi|395937776|gb|EJH48487.1| modulator of DNA gyrase family protein [Vibrio cholerae CP1048(21)]
gi|395946509|gb|EJH57172.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-20A2]
gi|395948380|gb|EJH59030.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-46A1]
gi|395964069|gb|EJH74311.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-56A2]
gi|395964211|gb|EJH74447.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-57A2]
gi|395967190|gb|EJH77290.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-42A1]
gi|395979370|gb|EJH88722.1| modulator of DNA gyrase family protein [Vibrio cholerae CP1047(20)]
gi|408010172|gb|EKG48044.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-39A1]
gi|408017104|gb|EKG54624.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-41A1]
gi|408036657|gb|EKG73079.1| modulator of DNA gyrase family protein [Vibrio cholerae CP1037(10)]
gi|408037586|gb|EKG73974.1| modulator of DNA gyrase family protein [Vibrio cholerae CP1040(13)]
gi|408045078|gb|EKG80947.1| modulator of DNA gyrase family protein [Vibrio Cholerae CP1044(17)]
gi|408046985|gb|EKG82643.1| modulator of DNA gyrase family protein [Vibrio cholerae CP1050(23)]
gi|408611918|gb|EKK85274.1| modulator of DNA gyrase family protein [Vibrio cholerae CP1033(6)]
gi|408627707|gb|EKL00510.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-17A1]
gi|408643047|gb|EKL14787.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-50A2]
gi|408659030|gb|EKL30086.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-77A1]
gi|408660066|gb|EKL31096.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-62A1]
gi|408849337|gb|EKL89359.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-37A1]
gi|408849832|gb|EKL89835.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-17A2]
gi|408874565|gb|EKM13735.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-62B1]
gi|408881507|gb|EKM20388.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-69A1]
gi|439975894|gb|ELP51996.1| TldD protein probably a protease [Vibrio cholerae 4260B]
gi|443433171|gb|ELS75688.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-64A1]
gi|443437002|gb|ELS83111.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-65A1]
gi|443440788|gb|ELS90469.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-67A1]
gi|443444655|gb|ELS97923.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-68A1]
gi|443448493|gb|ELT05122.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-71A1]
gi|443451514|gb|ELT11768.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-72A2]
gi|443458551|gb|ELT25946.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-7A1]
gi|443466529|gb|ELT41186.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-81A1]
gi|448266141|gb|EMB03371.1| TldD protein, part of proposed TldE/TldD proteolytic complex
[Vibrio cholerae O1 str. Inaba G4222]
Length = 481
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 253/481 (52%), Positives = 342/481 (71%), Gaps = 7/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N + LL P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 MNQIETALLAPAGLTEQDIADTLSSIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+ GVGVRA+SG+KT F YSD I L + + R IA Q G+ ++ K+ + + Y
Sbjct: 63 DCGVGVRAVSGEKTGFAYSDQIQLEGLKQSAIAARGIAQQ--GQNLTVQAFKRAQHPAFY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + S ++K +LL++++ R K+P + +V +LSG ++ IL+ DG DIR
Sbjct: 121 GAHNPLESWEKQQKTELLKQLDAYIRTKEPLITEVSVSLSGVHEQILVAATDGTYAGDIR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L ++++ +K RRE G++G GGR+ Y+YF I ++ AL+NLEA
Sbjct: 181 PLVRLSISVLAQKGDRRERGSAGGGGRFGYDYFLQEEAGQKIAFSFADEAIRQALVNLEA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS F+ +GK++ S TIVD+G
Sbjct: 241 VAAPAGTMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSVFAGKVGKKVTSDLCTIVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL + RGS+N+DDEG Q LIE GILKGY+QD +NARLM ++ TGN RRES+AH+P+
Sbjct: 301 TLKDLRGSLNVDDEGVSGQYNVLIEKGILKGYIQDKLNARLMGVAPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ PEEII+SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 361 PRMTNTYMLPGEHTPEEIIASVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIENGKITR 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG G +++VSM+GND+ LD GVGVCGK GQ VPVGVGQPTLK+D++TVGGT
Sbjct: 421 PIKGATLIGSGIEAMQQVSMVGNDLALDRGVGVCGKAGQSVPVGVGQPTLKLDALTVGGT 480
Query: 737 N 737
Sbjct: 481 E 481
>gi|407069860|ref|ZP_11100698.1| peptidase [Vibrio cyclitrophicus ZF14]
Length = 481
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 257/484 (53%), Positives = 347/484 (71%), Gaps = 15/484 (3%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N LL P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 INQIEEALLNPTGLTEQNIADTLASIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSL 380
+ GVGVRA+SG+KT F YSD I + L + + R IA Q NGK++ K NS
Sbjct: 63 DCGVGVRAVSGEKTGFAYSDQIQLDGLKQSAIAARGIAKQGQNGKVQAFKR------NSN 116
Query: 381 YSFTDTIS---SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIV 437
++ D ++ S ++K +LL+ ++ R K+P V +V +LSG ++ +L+ DG
Sbjct: 117 QAYYDAVNPLVSWEKQQKTELLKALDAYIRTKEPMVTEVSVSLSGVHEQMLVAATDGTYA 176
Query: 438 ADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALI 492
DIRPLV+L ++++ +K RRE G++G GGR+ Y++F + + ++ AL+
Sbjct: 177 GDIRPLVRLSISVLAQKGDRRERGSAGGGGRFGYDFFLSDANGSQVAYQFADEAIRQALV 236
Query: 493 NLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITI 552
NLEA APAG M VVLG GWPG+LLHEA+GHGLEGDFNRK SS FS +G+++ S TI
Sbjct: 237 NLEAVAAPAGAMPVVLGSGWPGVLLHEAVGHGLEGDFNRKESSVFSGKVGEQVTSSLCTI 296
Query: 553 VDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFA 612
VD+GTL + RGS+N+DDEG Q TLIENGILKGYMQD +NARLM+++ TGN RRES+A
Sbjct: 297 VDDGTLTDLRGSLNVDDEGVNGQYNTLIENGILKGYMQDKLNARLMDVAPTGNGRRESYA 356
Query: 613 HIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNG 672
H+P+PRMTNTYML G+ PEEII++V+ G+YA NF GGQVDIT+GKFVFSAS+AY+I+NG
Sbjct: 357 HLPMPRMTNTYMLPGEHTPEEIIATVEKGIYAPNFGGGQVDITSGKFVFSASEAYMIENG 416
Query: 673 KITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSIT 732
KIT+PVKGATLIG G +++VSM+GND+ LD GVGVCGK GQ VPVGVGQPTLK+DS+T
Sbjct: 417 KITHPVKGATLIGSGIEAMQQVSMVGNDLSLDRGVGVCGKAGQSVPVGVGQPTLKLDSLT 476
Query: 733 VGGT 736
VGGT
Sbjct: 477 VGGT 480
>gi|343505711|ref|ZP_08743268.1| hypothetical protein VII00023_16981 [Vibrio ichthyoenteri ATCC
700023]
gi|342806475|gb|EGU41697.1| hypothetical protein VII00023_16981 [Vibrio ichthyoenteri ATCC
700023]
Length = 481
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 257/481 (53%), Positives = 344/481 (71%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N LL+P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 INHVEDALLKPGGLTEQDIANTLESIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSL 380
+ G+GVRA++G+KT F YSD I + L + + R IA Q NGK++ K +
Sbjct: 63 DCGLGVRAVTGEKTGFAYSDQIQLDGLKQSAIAARGIAQQGQNGKVQAFKRFDN---QAY 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ + ++ +K LL+ ++ R K+P + +V +LSG ++ +L+ DG DI
Sbjct: 120 YAAVNPLNCWEKEKKTALLKELDAYIRTKEPLIEEVSISLSGLHEQMLVAATDGTYAGDI 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVS-----NSVNSALINLE 495
RPLV+L +T++ +K RRE G+SG GGR+NY+YF + + V+ ++ AL+NLE
Sbjct: 180 RPLVRLSITVLAQKGDRRERGSSGGGGRFNYDYFLTSVEGQNVAYQYADEAIRMALVNLE 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNRK SS FS IG+++ S TIVD+
Sbjct: 240 ADAAPAGTMPVVLGSGWPGVLLHEAVGHGLEGDFNRKESSVFSGKIGEKVTSNLCTIVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTL + RGS+N+DDEG Q TLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTLKDLRGSLNVDDEGVAGQYNTLIENGVLKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G+ PEEIIS+VK GLYA NF GGQVDIT+GKFVFS S+AY+I+NGKIT
Sbjct: 360 MPRMTNTYMLPGQHTPEEIISTVKKGLYAPNFGGGQVDITSGKFVFSTSEAYLIENGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G +++VSM+GND+ +D GVG+CGK GQ VPVGVGQPTLK+DSITVGG
Sbjct: 420 RPVKGATLIGSGLEAMQQVSMVGNDLSIDRGVGICGKAGQSVPVGVGQPTLKLDSITVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|153802103|ref|ZP_01956689.1| tldD protein [Vibrio cholerae MZO-3]
gi|124122347|gb|EAY41090.1| tldD protein [Vibrio cholerae MZO-3]
Length = 481
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 253/481 (52%), Positives = 342/481 (71%), Gaps = 7/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N + LL P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 MNQIETALLAPAGLTEQDIADTLSSIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+ GVGVRA+SG+KT F YSD I L + + R IA Q G+ ++ K+ + + Y
Sbjct: 63 DCGVGVRAVSGEKTGFAYSDQIQLEGLKQSAIAARGIAQQ--GQNLTVQAFKRAQHPAFY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + S ++K +LL++++ R K+P + +V +LSG ++ IL+ DG DIR
Sbjct: 121 GAHNPLESWEKQQKTELLKQLDAYIRTKEPLITEVSVSLSGVHEQILVAATDGTYAGDIR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L ++++ +K RRE G++G GGR+ Y+YF I ++ AL+NLEA
Sbjct: 181 PLVRLSISVLAQKCDRRERGSAGGGGRFGYDYFLQEEAGQKIAFSFADEAIRQALVNLEA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS F+ +GK++ S TIVD+G
Sbjct: 241 VAAPAGTMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSVFAGKVGKKVTSSLCTIVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL + RGS+N+DDEG Q LIE GILKGY+QD +NARLM ++ TGN RRES+AH+P+
Sbjct: 301 TLKDLRGSLNVDDEGVSGQYNVLIEKGILKGYIQDKLNARLMGVAPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ PEEII+SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 361 PRMTNTYMLPGEHTPEEIIASVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIENGKITR 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG G +++VSM+GND+ LD GVGVCGK GQ VPVGVGQPTLK+D++TVGGT
Sbjct: 421 PIKGATLIGSGIEAMQQVSMVGNDLALDRGVGVCGKAGQSVPVGVGQPTLKLDALTVGGT 480
Query: 737 N 737
Sbjct: 481 E 481
>gi|312884609|ref|ZP_07744312.1| Zn-dependent protease [Vibrio caribbenthicus ATCC BAA-2122]
gi|309367701|gb|EFP95250.1| Zn-dependent protease [Vibrio caribbenthicus ATCC BAA-2122]
Length = 481
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 259/481 (53%), Positives = 345/481 (71%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N LLEP LDE + L ++ ++DYAD YFQ + NE+ +LE+ I+K G+F+I
Sbjct: 3 VNHLEKALLEPSGLDENKIASTLASIATRQIDYADIYFQSSWNESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSL 380
++GVGVRA+ G+KT F YSD I L + + R IA Q N +++ +K K+ ++N
Sbjct: 63 DRGVGVRAVVGEKTGFAYSDQIDLIGLEQSACAARGIAQQGQNAQVQALK-WKENQVN-- 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y + ++S +K +LL+ ++ R K+P + +V +LSG Y+ +L+ DG D+
Sbjct: 120 YCEENPLNSWAKEQKTRLLKELDAYIRTKEPLITEVSISLSGVYEQMLVAATDGTYAGDV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVS-----NSVNSALINLE 495
RPLV+L ++++ +K RRE G++G GGR+ Y++F D + V+ ++ AL+NLE
Sbjct: 180 RPLVRLSISVLAQKGERRERGSAGGGGRFGYDFFLDSHGQSSVAYHFADEAIRMALVNLE 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A+ APAG M VVLG GWPG+LLHEA+GHGLEGDFNRK SS FS IG+++ S TIVD+
Sbjct: 240 AEAAPAGSMPVVLGSGWPGVLLHEAVGHGLEGDFNRKDSSVFSGKIGEKVTSDLCTIVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTL + RGS+N+DDEG Q TLIE G+LKGYMQD +NARLM +S TGN RRES+AH+P
Sbjct: 300 GTLKDLRGSLNVDDEGVNGQYNTLIEKGVLKGYMQDKLNARLMGVSPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G+ PEEIIS+VK GLYA NF GGQVDIT+GKFVFS S+AY+I+NGKIT
Sbjct: 360 MPRMTNTYMLPGQHTPEEIISTVKQGLYAPNFGGGQVDITSGKFVFSTSEAYLIENGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G ++ VSM+GND+ LD GVGVCGK GQ VPVGVGQPTLK+D +TVGG
Sbjct: 420 RPVKGATLIGSGIEAMQNVSMVGNDLSLDRGVGVCGKAGQSVPVGVGQPTLKLDVLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|429886310|ref|ZP_19367870.1| TldD protein, part of proposed TldE/TldD proteolytic complex
[Vibrio cholerae PS15]
gi|429226827|gb|EKY32899.1| TldD protein, part of proposed TldE/TldD proteolytic complex
[Vibrio cholerae PS15]
Length = 481
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 253/481 (52%), Positives = 341/481 (70%), Gaps = 7/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N + LL P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 MNQIETALLAPAGLTEQDIADTLSSIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+ GVGVRA+SG+KT F YSD I L + + R IA Q G+ ++ K+ + Y
Sbjct: 63 DCGVGVRAVSGEKTGFAYSDQIQLEGLKQSAIAARGIAQQ--GQNLTVQAFKRAQHPEFY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + S ++K +LL++++ R K+P + +V +LSG ++ IL+ DG DIR
Sbjct: 121 GAHNPLESWEKQQKTELLKQLDAYIRTKEPLITEVSVSLSGVHEQILVAATDGTYAGDIR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L ++++ +K RRE G++G GGR+ Y+YF I ++ AL+NLEA
Sbjct: 181 PLVRLSISVLAQKGDRRERGSAGGGGRFGYDYFLQEEAGQKIAFSFADEAIRQALVNLEA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS F+ +GK++ S TIVD+G
Sbjct: 241 VAAPAGTMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSVFAGKVGKKVTSSLCTIVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL + RGS+N+DDEG Q LIE GILKGY+QD +NARLM ++ TGN RRES+AH+P+
Sbjct: 301 TLKDLRGSLNVDDEGVSGQYNVLIEKGILKGYIQDKLNARLMGVAPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ PEEII+SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 361 PRMTNTYMLPGEHTPEEIIASVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIENGKITR 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG G +++VSM+GND+ LD GVGVCGK GQ VPVGVGQPTLK+D++TVGGT
Sbjct: 421 PIKGATLIGSGIEAMQQVSMVGNDLALDRGVGVCGKAGQSVPVGVGQPTLKLDALTVGGT 480
Query: 737 N 737
Sbjct: 481 E 481
>gi|258623376|ref|ZP_05718380.1| Protein tldD [Vibrio mimicus VM573]
gi|424810465|ref|ZP_18235817.1| tldD protein [Vibrio mimicus SX-4]
gi|258584342|gb|EEW09087.1| Protein tldD [Vibrio mimicus VM573]
gi|342322396|gb|EGU18187.1| tldD protein [Vibrio mimicus SX-4]
Length = 481
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 252/481 (52%), Positives = 341/481 (70%), Gaps = 7/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N + LL P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 MNHIEAALLAPAGLSEQDIADTLSSIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+ GVGVRA+SG+KT F YSD I L + + R IA Q G+ ++ K+ + Y
Sbjct: 63 DCGVGVRAVSGEKTGFAYSDQIQLEGLKQSAIAARGIAQQ--GQNLTVQAFKRAQHPQFY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + S ++K +LL++++ R K+P + +V +LSG ++ +L+ DG DIR
Sbjct: 121 GANNPLESWEKQQKTELLKQLDAYIRTKEPLITEVSVSLSGVHEQVLVAATDGTYAGDIR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L ++++ +K RRE G++G GGR+ Y+YF I ++ AL+NLEA
Sbjct: 181 PLVRLSISVLAQKGDRRERGSAGGGGRFGYDYFLQEEAGQKIAFSFADEAIRQALVNLEA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS F+ +GK++ S TIVD+G
Sbjct: 241 VAAPAGTMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSVFAGKVGKKVTSDLCTIVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL + RGS+N+DDEG Q LIE GILKGY+QD +NARLM ++ TGN RRES+AH+P+
Sbjct: 301 TLKDLRGSLNVDDEGVSGQYNVLIEKGILKGYIQDKLNARLMGVAPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ PEEII+SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 361 PRMTNTYMLPGEHTPEEIIASVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIENGKITR 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG G +++VSM+GND+ LD GVGVCGK GQ VPVGVGQPTLK+D++TVGGT
Sbjct: 421 PIKGATLIGSGIEAMQQVSMVGNDLALDRGVGVCGKAGQSVPVGVGQPTLKLDALTVGGT 480
Query: 737 N 737
Sbjct: 481 E 481
>gi|416055498|ref|ZP_11579561.1| U62 family peptidase 2 TldD [Aggregatibacter actinomycetemcomitans
serotype e str. SCC393]
gi|348002976|gb|EGY43636.1| U62 family peptidase 2 TldD [Aggregatibacter actinomycetemcomitans
serotype e str. SCC393]
Length = 478
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 245/463 (52%), Positives = 332/463 (71%), Gaps = 5/463 (1%)
Query: 280 LLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFY 339
L + + + VDYAD YFQ +++ENW+LE+GI+K G F I++GVGVRA+SG+KT F Y
Sbjct: 16 LPNVFDTLAQRNVDYADLYFQLSQDENWVLEDGIIKEGGFHIDRGVGVRAVSGEKTGFAY 75
Query: 340 SDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLL 399
SD I+ L ++ R IA S + + Y + + S++ +KI+LL
Sbjct: 76 SDQINLANLQQCAQAVRGIAQPSQCNFILPVKFNPVDTTLRYQPINPLHSLSQEQKIELL 135
Query: 400 ERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRRE 459
V++ AR +DPRV++V A LS Y+ IL+ DG + ADIRPL++L V+++VE++G+RE
Sbjct: 136 RLVDRTARAEDPRVVQVNAGLSMVYEEILVAATDGTLAADIRPLIRLSVSVLVEQDGKRE 195
Query: 460 IGNSGCGGRYNYNYFTDMI--LEKCV---SNSVNSALINLEAKPAPAGIMKVVLGPGWPG 514
G +G G R+ ++F + ++ V +V AL+NL A APAG+M VVLG GWPG
Sbjct: 196 RGGAGAGARFALDWFFESYNGEQRAVYFAKEAVRQALVNLSAVAAPAGLMPVVLGAGWPG 255
Query: 515 ILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPT 574
+LLHEA+GHGLEGDFNRK SS F+ IG+ + S TIVD+GTL +RRGS+ +DDEG P+
Sbjct: 256 VLLHEAVGHGLEGDFNRKESSLFTGKIGELVTSPLCTIVDDGTLMDRRGSVTVDDEGVPS 315
Query: 575 QCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEI 634
Q LI+NGIL+ YMQD MNARLM + TGN RRES+AH+P+PRMTNTYML GK E++
Sbjct: 316 QHNVLIKNGILQKYMQDKMNARLMGVQPTGNGRRESYAHLPMPRMTNTYMLAGKDKFEDL 375
Query: 635 ISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKV 694
++SV+ G++A +F GGQVDIT+GKFVFS S+AY+I+ GKIT PVKGATLIG G +++ V
Sbjct: 376 VASVEQGIFAPHFGGGQVDITSGKFVFSTSEAYLIEKGKITKPVKGATLIGSGIEVMQNV 435
Query: 695 SMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
SM+ ++++LD GVG CGK+GQ VPVGVGQP LKID ITVGGTN
Sbjct: 436 SMVADEVELDHGVGTCGKEGQSVPVGVGQPALKIDQITVGGTN 478
>gi|297580560|ref|ZP_06942486.1| tldD protein [Vibrio cholerae RC385]
gi|297534976|gb|EFH73811.1| tldD protein [Vibrio cholerae RC385]
Length = 481
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 253/481 (52%), Positives = 341/481 (70%), Gaps = 7/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N + LL P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 MNQIETALLAPAGLTEQDIADTLSSIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+ GVGVRA+SG+KT F YSD I L + + R IA Q G+ ++ K+ + Y
Sbjct: 63 DCGVGVRAVSGEKTGFAYSDQIQLEGLKQSAIAARGIAQQ--GQNLTVQAFKRAQHPQFY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + S ++K +LL++++ R K+P + +V +LSG ++ IL+ DG DIR
Sbjct: 121 GAHNPLESWEKQQKTELLKQLDAYIRTKEPLITEVSVSLSGVHEQILVAATDGTYAGDIR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L ++++ +K RRE G++G GGR+ Y+YF I ++ AL+NLEA
Sbjct: 181 PLVRLSISVLAQKGDRRERGSAGGGGRFGYDYFLQEEAGQKIAFSFADEAIRQALVNLEA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS F+ +GK++ S TIVD+G
Sbjct: 241 VAAPAGTMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSVFAGKVGKKVTSDLCTIVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL + RGS+N+DDEG Q LIE GILKGY+QD +NARLM ++ TGN RRES+AH+P+
Sbjct: 301 TLKDLRGSLNVDDEGVSGQYNVLIEKGILKGYIQDKLNARLMGVAPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ PEEII+SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 361 PRMTNTYMLPGEHTPEEIIASVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIENGKITR 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG G +++VSM+GND+ LD GVGVCGK GQ VPVGVGQPTLK+D++TVGGT
Sbjct: 421 PIKGATLIGSGIEAMQQVSMVGNDLALDRGVGVCGKAGQSVPVGVGQPTLKLDTLTVGGT 480
Query: 737 N 737
Sbjct: 481 E 481
>gi|261867726|ref|YP_003255648.1| TldD [Aggregatibacter actinomycetemcomitans D11S-1]
gi|365967507|ref|YP_004949069.1| U62 family peptidase 2 TldD [Aggregatibacter actinomycetemcomitans
ANH9381]
gi|415767716|ref|ZP_11483361.1| peptidase U62 modulator of DNA gyrase [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|416075215|ref|ZP_11584948.1| U62 family peptidase 2 TldD [Aggregatibacter actinomycetemcomitans
serotype b str. SCC1398]
gi|444346439|ref|ZP_21154405.1| U62 family peptidase 2 TldD [Aggregatibacter actinomycetemcomitans
serotype c str. AAS4A]
gi|261413058|gb|ACX82429.1| TldD [Aggregatibacter actinomycetemcomitans D11S-1]
gi|348006334|gb|EGY46766.1| U62 family peptidase 2 TldD [Aggregatibacter actinomycetemcomitans
serotype b str. SCC1398]
gi|348658351|gb|EGY75921.1| peptidase U62 modulator of DNA gyrase [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|365746420|gb|AEW77325.1| U62 family peptidase 2 TldD [Aggregatibacter actinomycetemcomitans
ANH9381]
gi|443541614|gb|ELT52032.1| U62 family peptidase 2 TldD [Aggregatibacter actinomycetemcomitans
serotype c str. AAS4A]
Length = 482
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 244/463 (52%), Positives = 330/463 (71%), Gaps = 5/463 (1%)
Query: 280 LLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFY 339
L + + + VDYAD YFQ +++ENW+LE+GI+K G F I++GVGVRA+SG+KT F Y
Sbjct: 20 LPNVFDTLAQRNVDYADLYFQLSQDENWVLEDGIIKEGGFHIDRGVGVRAVSGEKTGFAY 79
Query: 340 SDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLL 399
SD I+ L ++ R IA S + + Y + + S++ +KI+LL
Sbjct: 80 SDQINLANLQQCAQAVRGIAQPSQCNFILPVKFNPVDATLRYQPINPLHSLSQEQKIELL 139
Query: 400 ERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRRE 459
V++ AR +DPRV++V A LS Y+ +L+ DG + ADIRPL++L V+++VE++G+RE
Sbjct: 140 RLVDRTARAEDPRVVQVNAGLSMVYEEMLVAATDGTLAADIRPLIRLSVSVLVEQDGKRE 199
Query: 460 IGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPG 514
G +G GGR+ ++F + +V AL+NL A APAG+M VVLG GWPG
Sbjct: 200 RGGAGAGGRFALDWFFENYNGEQSAVYFAKEAVRQALVNLSAVAAPAGLMPVVLGAGWPG 259
Query: 515 ILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPT 574
+LLHEA+GHGLEGDFNRK SS F+ IG+ + S TIVD+GTL +RRGS+ +DDEG P+
Sbjct: 260 VLLHEAVGHGLEGDFNRKESSLFTGKIGELVTSPLCTIVDDGTLMDRRGSVTVDDEGVPS 319
Query: 575 QCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEI 634
Q LI+NGIL+ YMQD MNARLM + TGN RRES+AH+P+PRMTNTYML GK E++
Sbjct: 320 QHNVLIKNGILQKYMQDKMNARLMGVQPTGNGRRESYAHLPMPRMTNTYMLAGKDKFEDL 379
Query: 635 ISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKV 694
++SV+ G++A +F GGQVDIT+GKFVFS S+AY+I+ GKIT PVKGATLIG G +++ V
Sbjct: 380 VASVEQGIFAPHFGGGQVDITSGKFVFSTSEAYLIEKGKITKPVKGATLIGSGIEVMQNV 439
Query: 695 SMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
SM+ ++++LD GVG CGK+GQ VPVGVGQP LKID ITVGGTN
Sbjct: 440 SMVADEVELDHGVGTCGKEGQSVPVGVGQPALKIDQITVGGTN 482
>gi|261209925|ref|ZP_05924225.1| TldD protein probably a protease [Vibrio sp. RC341]
gi|262401492|ref|ZP_06078059.1| TldD protein probably a protease [Vibrio sp. RC586]
gi|260840990|gb|EEX67522.1| TldD protein probably a protease [Vibrio sp. RC341]
gi|262352207|gb|EEZ01336.1| TldD protein probably a protease [Vibrio sp. RC586]
Length = 481
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 251/481 (52%), Positives = 341/481 (70%), Gaps = 7/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N + LL P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 MNHIEAALLAPAGLSEQDIADTLSSIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+ GVGVRA+SG+KT F YSD I L + + R IA Q G+ ++ K+ + Y
Sbjct: 63 DCGVGVRAVSGEKTGFAYSDQIQLEGLKQSAIAARGIAQQ--GQSLTVQAFKRAQHPQFY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + S ++K +LL++++ R K+P + +V ++SG ++ IL+ DG D+R
Sbjct: 121 GANNPLESWEKQQKTELLKQLDAYIRTKEPLITEVSVSISGVHEQILVAATDGTYAGDVR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L ++++ +K RRE G++G GGR+ Y+YF I ++ AL+NLEA
Sbjct: 181 PLVRLSISVLAQKGDRRERGSAGGGGRFGYDYFLQEEAGQKIAFSFADEAIRQALVNLEA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS F+ +GK++ S TIVD+G
Sbjct: 241 VAAPAGTMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSVFAGKVGKKVTSDLCTIVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL + RGS+N+DDEG Q LIE GILKGY+QD +NARLM ++ TGN RRES+AH+P+
Sbjct: 301 TLKDLRGSLNVDDEGVSGQYNVLIEKGILKGYIQDKLNARLMGVAPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ PEEII+SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 361 PRMTNTYMLPGEHTPEEIIASVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIENGKITR 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG G +++VSM+GND+ LD GVGVCGK GQ VPVGVGQPTLK+D++TVGGT
Sbjct: 421 PIKGATLIGSGIEAMQQVSMVGNDLALDRGVGVCGKAGQSVPVGVGQPTLKLDALTVGGT 480
Query: 737 N 737
Sbjct: 481 E 481
>gi|422921675|ref|ZP_16954885.1| modulator of DNA gyrase family protein [Vibrio cholerae BJG-01]
gi|341648178|gb|EGS72243.1| modulator of DNA gyrase family protein [Vibrio cholerae BJG-01]
Length = 481
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 253/481 (52%), Positives = 341/481 (70%), Gaps = 7/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N + LL P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 MNQIETALLAPAGLTEQDIADTLSSIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+ GVGVRA+SG+KT F YSD I L + + R IA Q G+ ++ K+ + Y
Sbjct: 63 DCGVGVRAVSGEKTGFAYSDQIQLEGLKQSAIAARGIAQQ--GQNLTVQAFKRAQHPEFY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + S ++K +LL++++ R K+P + +V +LSG ++ IL+ DG DIR
Sbjct: 121 GAHNPLESWEKQQKTELLKQLDAYIRTKEPLITEVSVSLSGVHEQILVAATDGTYAGDIR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L ++++ +K RRE G++G GGR+ Y+YF I ++ AL+NLEA
Sbjct: 181 PLVRLSISVLAQKGDRRERGSAGGGGRFGYDYFLQEEAGQKIAFSFADEAIRQALVNLEA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS F+ +GK++ S TIVD+G
Sbjct: 241 VAAPAGTMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSVFAGKVGKKVTSDLCTIVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL + RGS+N+DDEG Q LIE GILKGY+QD +NARLM ++ TGN RRES+AH+P+
Sbjct: 301 TLKDLRGSLNVDDEGVSGQYNVLIEKGILKGYIQDKLNARLMGVAPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ PEEII+SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 361 PRMTNTYMLPGEHTPEEIIASVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIENGKITR 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG G +++VSM+GND+ LD GVGVCGK GQ VPVGVGQPTLK+D++TVGGT
Sbjct: 421 PIKGATLIGSGIEAMQQVSMVGNDLALDRGVGVCGKAGQSVPVGVGQPTLKLDALTVGGT 480
Query: 737 N 737
Sbjct: 481 E 481
>gi|419835368|ref|ZP_14358813.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-46B1]
gi|421342224|ref|ZP_15792631.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-43B1]
gi|423733729|ref|ZP_17706945.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-41B1]
gi|424008014|ref|ZP_17750964.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-44C1]
gi|395945727|gb|EJH56392.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-43B1]
gi|408631886|gb|EKL04402.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-41B1]
gi|408858781|gb|EKL98451.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-46B1]
gi|408866301|gb|EKM05684.1| modulator of DNA gyrase family protein [Vibrio cholerae HC-44C1]
Length = 481
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 252/481 (52%), Positives = 342/481 (71%), Gaps = 7/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N + LL P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 MNQIETALLAPAGLTEQDIADTLSSIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+ GVGVRA+SG+KT F YSD I L + + R IA Q G+ ++ K+ + + Y
Sbjct: 63 DCGVGVRAVSGEKTGFAYSDQIQLEGLKQSAIAARGIAQQ--GQNLTVQAFKRAQHPAFY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + S ++K +LL++++ R K+P + +V +LSG ++ IL+ DG DIR
Sbjct: 121 GAHNPLESWEKQQKTELLKQLDAYIRTKEPLITEVSVSLSGVHEQILVAATDGTYAGDIR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L ++++ +K RRE G++G GGR+ Y+YF + ++ AL+NLEA
Sbjct: 181 PLVRLSISVLAQKGDRRERGSAGGGGRFGYDYFLQEEAGQKLAFSFADEAIRQALVNLEA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS F+ +GK++ S TIVD+G
Sbjct: 241 VAAPAGTMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSVFAGKVGKKVTSDLCTIVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL + RGS+N+DDEG Q LIE GILKGY+QD +NARLM ++ TGN RRES+AH+P+
Sbjct: 301 TLKDLRGSLNVDDEGVSGQYNVLIEKGILKGYIQDKLNARLMGVAPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ PEEII+SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 361 PRMTNTYMLPGEHTPEEIIASVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIENGKITR 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG G +++VSM+GND+ LD GVGVCGK GQ VPVGVGQPTLK+D++TVGGT
Sbjct: 421 PIKGATLIGSGIEAMQQVSMVGNDLALDRGVGVCGKAGQSVPVGVGQPTLKLDALTVGGT 480
Query: 737 N 737
Sbjct: 481 E 481
>gi|229520009|ref|ZP_04409438.1| TldD protein probably a protease [Vibrio cholerae TM 11079-80]
gi|421353241|ref|ZP_15803575.1| modulator of DNA gyrase family protein [Vibrio cholerae HE-45]
gi|229342958|gb|EEO07947.1| TldD protein probably a protease [Vibrio cholerae TM 11079-80]
gi|395955014|gb|EJH65619.1| modulator of DNA gyrase family protein [Vibrio cholerae HE-45]
Length = 481
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 253/481 (52%), Positives = 341/481 (70%), Gaps = 7/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N + LL P L E+ + L ++ ++DYAD YFQ +E+ +LE+ I+K G+F+I
Sbjct: 3 MNQIETALLAPAGLTEQDIADTLSSIATRQIDYADIYFQSNWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+ GVGVRA+SG+KT F YSD I L + + R IA Q G+ ++ K+ + + Y
Sbjct: 63 DCGVGVRAVSGEKTGFAYSDQIQLEGLKQSAIAARGIAQQ--GQNLTVQAFKRAQHPAFY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + S ++K +LL++++ R K+P + +V +LSG ++ IL+ DG DIR
Sbjct: 121 DAHNPLESWEKQQKTELLKQLDAYIRTKEPLITEVSVSLSGVHEQILVAATDGTYAGDIR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L ++++ +K RRE G++G GGR+ Y+YF I ++ AL+NLEA
Sbjct: 181 PLVRLSISVLAQKGDRRERGSAGGGGRFGYDYFLQEEAGQKIAFSFADEAIRQALVNLEA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS F+ +GK++ S TIVD+G
Sbjct: 241 VAAPAGTMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSVFAGKVGKKVTSDLCTIVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL + RGS+N+DDEG Q LIE GILKGY+QD +NARLM ++ TGN RRES+AH+P+
Sbjct: 301 TLKDLRGSLNVDDEGVSGQYNVLIEKGILKGYIQDKLNARLMGVAPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ PEEII+SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 361 PRMTNTYMLPGEHTPEEIIASVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIENGKITR 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG G +++VSM+GND+ LD GVGVCGK GQ VPVGVGQPTLK+D++TVGGT
Sbjct: 421 PIKGATLIGSGIEAMQQVSMVGNDLALDRGVGVCGKAGQSVPVGVGQPTLKLDALTVGGT 480
Query: 737 N 737
Sbjct: 481 E 481
>gi|148977844|ref|ZP_01814399.1| TldD protein [Vibrionales bacterium SWAT-3]
gi|145962913|gb|EDK28184.1| TldD protein [Vibrionales bacterium SWAT-3]
Length = 481
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 254/481 (52%), Positives = 344/481 (71%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N LL P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 INQIEEALLNPTGLTEQNIADTLASIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSL 380
+ GVGVRA+SG+KT F YSD I + L + + R IA Q NGK++ K +
Sbjct: 63 DCGVGVRAVSGEKTGFAYSDQIQLDGLKQSAIAARGIAKQGQNGKVQAFKRNSN---QTY 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y + ++S ++K +LL+ ++ R K+P V +V +LSG ++ +L+ DG DI
Sbjct: 120 YDAVNPLASWEKQQKTELLKSLDAYIRTKEPMVTEVSVSLSGVHEQMLVAATDGTYAGDI 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTD-----MILEKCVSNSVNSALINLE 495
RPLV+L ++++ +K RRE G++G GGR+ Y++F + + ++ AL+NLE
Sbjct: 180 RPLVRLSISVLAQKGDRRERGSAGGGGRFGYDFFLSDDKGTQVAYQFADEAIRQALVNLE 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNRK SS FS +G+++ S TIVD+
Sbjct: 240 AVAAPAGAMPVVLGSGWPGVLLHEAVGHGLEGDFNRKESSVFSGKVGEQVTSSLCTIVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTL + RGS+N+DDEG Q TLIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTLTDLRGSLNVDDEGVNGQYNTLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G+ PEEII++V+ G+YA NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 360 MPRMTNTYMLPGEHTPEEIIATVEKGIYAPNFGGGQVDITSGKFVFSASEAYMIENGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
+PVKGATLIG G +++VSM+GND+ +D GVGVCGK GQ VPVGVGQPTLK+DS+TVGG
Sbjct: 420 HPVKGATLIGSGIEAMQQVSMVGNDLSIDRGVGVCGKAGQSVPVGVGQPTLKLDSLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|416088374|ref|ZP_11587760.1| U62 family peptidase 2 TldD [Aggregatibacter actinomycetemcomitans
serotype b str. I23C]
gi|348009555|gb|EGY49692.1| U62 family peptidase 2 TldD [Aggregatibacter actinomycetemcomitans
serotype b str. I23C]
Length = 478
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 244/463 (52%), Positives = 330/463 (71%), Gaps = 5/463 (1%)
Query: 280 LLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFY 339
L + + + VDYAD YFQ +++ENW+LE+GI+K G F I++GVGVRA+SG+KT F Y
Sbjct: 16 LPNVFDTLAQRNVDYADLYFQLSQDENWVLEDGIIKEGGFHIDRGVGVRAVSGEKTGFAY 75
Query: 340 SDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLL 399
SD I+ L ++ R IA S + + Y + + S++ +KI+LL
Sbjct: 76 SDQINLANLQQCAQAVRGIAQPSQCNFILPVKFNPVDATLRYQPINPLHSLSQEQKIELL 135
Query: 400 ERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRRE 459
V++ AR +DPRV++V A LS Y+ +L+ DG + ADIRPL++L V+++VE++G+RE
Sbjct: 136 RLVDRTARAEDPRVVQVNAGLSMVYEEMLVAATDGTLAADIRPLIRLSVSVLVEQDGKRE 195
Query: 460 IGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPG 514
G +G GGR+ ++F + +V AL+NL A APAG+M VVLG GWPG
Sbjct: 196 RGGAGAGGRFALDWFFENYNGEQSAVYFAKEAVRQALVNLSAVAAPAGLMPVVLGAGWPG 255
Query: 515 ILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPT 574
+LLHEA+GHGLEGDFNRK SS F+ IG+ + S TIVD+GTL +RRGS+ +DDEG P+
Sbjct: 256 VLLHEAVGHGLEGDFNRKESSLFTGKIGELVTSPLCTIVDDGTLMDRRGSVTVDDEGVPS 315
Query: 575 QCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEI 634
Q LI+NGIL+ YMQD MNARLM + TGN RRES+AH+P+PRMTNTYML GK E++
Sbjct: 316 QHNVLIKNGILQKYMQDKMNARLMGVQPTGNGRRESYAHLPMPRMTNTYMLAGKDKFEDL 375
Query: 635 ISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKV 694
++SV+ G++A +F GGQVDIT+GKFVFS S+AY+I+ GKIT PVKGATLIG G +++ V
Sbjct: 376 VASVEQGIFAPHFGGGQVDITSGKFVFSTSEAYLIEKGKITKPVKGATLIGSGIEVMQNV 435
Query: 695 SMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
SM+ ++++LD GVG CGK+GQ VPVGVGQP LKID ITVGGTN
Sbjct: 436 SMVADEVELDHGVGTCGKEGQSVPVGVGQPALKIDQITVGGTN 478
>gi|418464483|ref|ZP_13035423.1| TldD protein [Aggregatibacter actinomycetemcomitans RhAA1]
gi|359757279|gb|EHK91435.1| TldD protein [Aggregatibacter actinomycetemcomitans RhAA1]
Length = 482
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 245/463 (52%), Positives = 334/463 (72%), Gaps = 5/463 (1%)
Query: 280 LLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFY 339
L + + + VDYAD YFQ +++ENW+LE+GI+K G F I++GVGVRA+SG+KT F Y
Sbjct: 20 LPNVFDTLAQRNVDYADLYFQLSQDENWVLEDGIIKEGGFHIDRGVGVRAVSGEKTGFAY 79
Query: 340 SDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLL 399
SD I+ L ++ R IA S + ++ Y + + S++ +KI+LL
Sbjct: 80 SDQINLANLQQCAQAVRGIAQPSQCNFILPVKFNPVEAPLRYQPINPLHSLSQEQKIELL 139
Query: 400 ERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRRE 459
V+K AR DPRV++V A LS Y+ +L+ DG + ADIRPL++L V+++VE++G+RE
Sbjct: 140 HLVDKTARAADPRVVQVNAGLSMVYEEMLVAATDGTLAADIRPLIRLSVSVLVEQDGKRE 199
Query: 460 IGNSGCGGRYNYNYFTDMI--LEKCV---SNSVNSALINLEAKPAPAGIMKVVLGPGWPG 514
G +G GGR+ ++F + ++ V +V AL+NL A APAG+M VVLG GWPG
Sbjct: 200 RGGAGAGGRFALDWFFENYNGEQRAVYFAKEAVRQALVNLSAVAAPAGLMPVVLGAGWPG 259
Query: 515 ILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPT 574
+LLHEA+GHGLEGDFNRK SS F+ IG+ + S TIVD+GTL +RRGS+ +DDEG P+
Sbjct: 260 VLLHEAVGHGLEGDFNRKESSLFTGKIGELVTSPLCTIVDDGTLMDRRGSVTVDDEGVPS 319
Query: 575 QCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEI 634
Q LI++GIL+ YMQD MNARLM + TGN RRES+AH+P+PRMTNTYML GK E++
Sbjct: 320 QHNVLIKDGILQKYMQDKMNARLMGVQPTGNGRRESYAHLPMPRMTNTYMLAGKDKFEDL 379
Query: 635 ISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKV 694
++SV++G++A +F GGQVDIT+GKFVFS S+AY+I+ GKIT PVKGATLIG G +++ V
Sbjct: 380 VASVEHGIFAPHFGGGQVDITSGKFVFSTSEAYLIEKGKITKPVKGATLIGSGIEVMQNV 439
Query: 695 SMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
SM+ ++++LD GVG CGK+GQ VPVGVGQP LKID ITVGGTN
Sbjct: 440 SMVADEVELDHGVGTCGKEGQSVPVGVGQPALKIDQITVGGTN 482
>gi|86147832|ref|ZP_01066138.1| TldD protein [Vibrio sp. MED222]
gi|85834359|gb|EAQ52511.1| TldD protein [Vibrio sp. MED222]
Length = 481
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 254/481 (52%), Positives = 344/481 (71%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N LL P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 INQIEEALLNPTGLTEQNIADTLASIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSL 380
+ G+GVRA+SG+KT F YSD I + L + + R IA Q NGK++ K +
Sbjct: 63 DCGLGVRAVSGEKTGFAYSDQIQLDGLKQSAIAARGIAKQGQNGKVQAFKRNSN---QAY 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y + ++S ++K +LL+ ++ R K+P V +V +LSG ++ +L+ DG DI
Sbjct: 120 YDAVNPLASWEKQQKTELLKALDAYIRTKEPMVTEVSVSLSGVHEQMLVAATDGTFAGDI 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L ++++ +K RRE G++G GGR+ Y++F + + ++ AL+NLE
Sbjct: 180 RPLVRLSISVLAQKGDRRERGSAGGGGRFGYDFFLSDANGSQVAYQFADEAIRQALVNLE 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNRK SS FS IG+++ S TIVD+
Sbjct: 240 AVAAPAGAMPVVLGSGWPGVLLHEAVGHGLEGDFNRKESSVFSGKIGEQVTSSLCTIVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTL + RGS+N+DDEG Q TLIENGILKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTLTDLRGSLNVDDEGVNGQYNTLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G+ PEEII++V+ G+YA NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 360 MPRMTNTYMLPGEHTPEEIIATVEKGIYAPNFGGGQVDITSGKFVFSASEAYMIENGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
+PVKGATLIG G +++VSM+GND+ +D GVGVCGK GQ VPVGVGQPTLK+DS+TVGG
Sbjct: 420 HPVKGATLIGSGIEAMQQVSMVGNDLSIDRGVGVCGKAGQSVPVGVGQPTLKLDSLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|444349277|ref|ZP_21156766.1| U62 family peptidase 2 TldD [Aggregatibacter actinomycetemcomitans
serotype b str. S23A]
gi|443545002|gb|ELT54876.1| U62 family peptidase 2 TldD [Aggregatibacter actinomycetemcomitans
serotype b str. S23A]
Length = 473
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 244/463 (52%), Positives = 330/463 (71%), Gaps = 5/463 (1%)
Query: 280 LLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFY 339
L + + + VDYAD YFQ +++ENW+LE+GI+K G F I++GVGVRA+SG+KT F Y
Sbjct: 11 LPNVFDTLAQRNVDYADLYFQLSQDENWVLEDGIIKEGGFHIDRGVGVRAVSGEKTGFAY 70
Query: 340 SDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLL 399
SD I+ L ++ R IA S + + Y + + S++ +KI+LL
Sbjct: 71 SDQINLANLQQCAQAVRGIAQPSQCNFILPVKFNPVDATLRYQPINPLHSLSQEQKIELL 130
Query: 400 ERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRRE 459
V++ AR +DPRV++V A LS Y+ +L+ DG + ADIRPL++L V+++VE++G+RE
Sbjct: 131 RLVDRTARAEDPRVVQVNAGLSMVYEEMLVAATDGTLAADIRPLIRLSVSVLVEQDGKRE 190
Query: 460 IGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPG 514
G +G GGR+ ++F + +V AL+NL A APAG+M VVLG GWPG
Sbjct: 191 RGGAGAGGRFALDWFFENYNGEQSAVYFAKEAVRQALVNLSAVAAPAGLMPVVLGAGWPG 250
Query: 515 ILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPT 574
+LLHEA+GHGLEGDFNRK SS F+ IG+ + S TIVD+GTL +RRGS+ +DDEG P+
Sbjct: 251 VLLHEAVGHGLEGDFNRKESSLFTGKIGELVTSPLCTIVDDGTLMDRRGSVTVDDEGVPS 310
Query: 575 QCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEI 634
Q LI+NGIL+ YMQD MNARLM + TGN RRES+AH+P+PRMTNTYML GK E++
Sbjct: 311 QHNVLIKNGILQKYMQDKMNARLMGVQPTGNGRRESYAHLPMPRMTNTYMLAGKDKFEDL 370
Query: 635 ISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKV 694
++SV+ G++A +F GGQVDIT+GKFVFS S+AY+I+ GKIT PVKGATLIG G +++ V
Sbjct: 371 VASVEQGIFAPHFGGGQVDITSGKFVFSTSEAYLIEKGKITKPVKGATLIGSGIEVMQNV 430
Query: 695 SMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
SM+ ++++LD GVG CGK+GQ VPVGVGQP LKID ITVGGTN
Sbjct: 431 SMVADEVELDHGVGTCGKEGQSVPVGVGQPALKIDQITVGGTN 473
>gi|421350281|ref|ZP_15800647.1| modulator of DNA gyrase family protein [Vibrio cholerae HE-25]
gi|395954403|gb|EJH65013.1| modulator of DNA gyrase family protein [Vibrio cholerae HE-25]
Length = 481
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 252/481 (52%), Positives = 342/481 (71%), Gaps = 7/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N + LL P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 MNQIETALLAPAGLTEQDIADTLSSIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+ GVGVRA+SG+KT F YSD I L + + R IA Q G+ ++ K+ + + Y
Sbjct: 63 DCGVGVRAVSGEKTGFAYSDQIQLEGLKQSAIAARGIAQQ--GQNLTVQAFKRAQHPAFY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + S ++K +LL++++ R K+P + +V +LSG ++ IL+ DG DIR
Sbjct: 121 GAHNPLESWEKQQKTELLKQLDAYIRTKEPLITEVSVSLSGVHEQILVAATDGTYAGDIR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L ++++ +K RRE G++G GGR+ Y+YF I ++ AL+NLEA
Sbjct: 181 PLVRLSISVLAQKGDRRERGSAGGGGRFGYDYFLQEEAGQKIAFSFADEAIRQALVNLEA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS F+ +G+++ S TIVD+G
Sbjct: 241 VAAPAGTMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSVFAGKVGQKVTSDLCTIVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL + RGS+N+DDEG Q LIE GILKGY+QD +NARLM ++ TGN RRES+AH+P+
Sbjct: 301 TLKDLRGSLNVDDEGVSGQYNVLIEKGILKGYIQDKLNARLMGVAPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ PEEII+SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 361 PRMTNTYMLPGEHTPEEIIASVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIENGKITR 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG G +++VSM+GND+ LD GVGVCGK GQ VPVGVGQPTLK+D++TVGGT
Sbjct: 421 PIKGATLIGSGIEAMQQVSMVGNDLALDRGVGVCGKAGQSVPVGVGQPTLKLDALTVGGT 480
Query: 737 N 737
Sbjct: 481 E 481
>gi|254291326|ref|ZP_04962120.1| tldD protein [Vibrio cholerae AM-19226]
gi|150422782|gb|EDN14735.1| tldD protein [Vibrio cholerae AM-19226]
Length = 481
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 253/481 (52%), Positives = 341/481 (70%), Gaps = 7/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N + LL P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 MNQIETALLAPAGLTEQDIADTLSSIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+ GVGVRA+SG+KT F YSD I L + + R IA Q G+ ++ K+ + Y
Sbjct: 63 DCGVGVRAVSGEKTGFAYSDQIQLEGLKQSAIAARGIAQQ--GQNLTVQAFKRAQHPEFY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + S ++K +LL++++ R K+P + +V +LSG ++ IL+ DG DIR
Sbjct: 121 GAHNPLESWEKQQKTELLKQLDAYIRTKEPLITEVSVSLSGVHEQILVAATDGTYAGDIR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L ++++ +K RRE G++G GGR+ Y+YF I ++ AL+NLEA
Sbjct: 181 PLVRLSISVLAQKGDRRERGSAGGGGRFGYDYFLQEEAGQKIAFSFADEAIRQALVNLEA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS F+ +GK++ S TIVD+G
Sbjct: 241 IAAPAGTMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSVFAGKVGKKVTSDLCTIVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL + RGS+N+DDEG Q LIE GILKGY+QD +NARLM ++ TGN RRES+AH+P+
Sbjct: 301 TLKDLRGSLNVDDEGVSGQYNVLIEKGILKGYIQDKLNARLMGVAPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ PEEII+SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 361 PRMTNTYMLPGEHTPEEIIASVKKGIYAPNFGGGQVDITSGKFVFSASEAYMIENGKITR 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG G +++VSM+GND+ LD GVGVCGK GQ VPVGVGQPTLK+D++TVGGT
Sbjct: 421 PIKGATLIGSGIEAMQQVSMVGNDLALDRGVGVCGKAGQSVPVGVGQPTLKLDALTVGGT 480
Query: 737 N 737
Sbjct: 481 E 481
>gi|444335187|ref|ZP_21150498.1| U62 family peptidase 2 TldD [Aggregatibacter actinomycetemcomitans
serotype a str. A160]
gi|443549320|gb|ELT58204.1| U62 family peptidase 2 TldD [Aggregatibacter actinomycetemcomitans
serotype a str. A160]
Length = 513
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 245/463 (52%), Positives = 332/463 (71%), Gaps = 5/463 (1%)
Query: 280 LLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFY 339
L + + + VDYAD YFQ +++ENW+LE+GI+K G F I++GVGVRA+SG+KT F Y
Sbjct: 51 LPNVFDTLAQRNVDYADLYFQLSQDENWVLEDGIIKEGGFHIDRGVGVRAVSGEKTGFAY 110
Query: 340 SDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLL 399
SD I+ L ++ R IA S + + Y + + S++ +KI+LL
Sbjct: 111 SDQINLANLQQCAQAVRGIAQPSQCNFILPVKFNPVDTTLRYQPINPLHSLSQEQKIELL 170
Query: 400 ERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRRE 459
V++ AR +DPRV++V A LS Y+ IL+ DG + ADIRPL++L V+++VE++G+RE
Sbjct: 171 RLVDRTARAEDPRVVQVNAGLSMVYEEILVAATDGTLAADIRPLIRLSVSVLVEQDGKRE 230
Query: 460 IGNSGCGGRYNYNYFTDMI--LEKCV---SNSVNSALINLEAKPAPAGIMKVVLGPGWPG 514
G +G G R+ ++F + ++ V +V AL+NL A APAG+M VVLG GWPG
Sbjct: 231 RGGAGAGARFALDWFFESYNGEQRAVYFAKEAVRQALVNLSAVAAPAGLMPVVLGAGWPG 290
Query: 515 ILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPT 574
+LLHEA+GHGLEGDFNRK SS F+ IG+ + S TIVD+GTL +RRGS+ +DDEG P+
Sbjct: 291 VLLHEAVGHGLEGDFNRKESSLFTGKIGELVTSPLCTIVDDGTLMDRRGSVTVDDEGVPS 350
Query: 575 QCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEI 634
Q LI+NGIL+ YMQD MNARLM + TGN RRES+AH+P+PRMTNTYML GK E++
Sbjct: 351 QHNVLIKNGILQKYMQDKMNARLMGVQPTGNGRRESYAHLPMPRMTNTYMLAGKDKFEDL 410
Query: 635 ISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKV 694
++SV+ G++A +F GGQVDIT+GKFVFS S+AY+I+ GKIT PVKGATLIG G +++ V
Sbjct: 411 VASVEQGIFAPHFGGGQVDITSGKFVFSTSEAYLIEKGKITKPVKGATLIGSGIEVMQNV 470
Query: 695 SMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
SM+ ++++LD GVG CGK+GQ VPVGVGQP LKID ITVGGTN
Sbjct: 471 SMVADEVELDHGVGTCGKEGQSVPVGVGQPALKIDQITVGGTN 513
>gi|378822376|ref|ZP_09845163.1| TldD/PmbA family protein [Sutterella parvirubra YIT 11816]
gi|378598810|gb|EHY31911.1| TldD/PmbA family protein [Sutterella parvirubra YIT 11816]
Length = 484
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 232/459 (50%), Positives = 320/459 (69%), Gaps = 6/459 (1%)
Query: 282 KILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSD 341
++ + K D+AD YFQ + +W+LE+G V+TG+F I++G G+R ++G++ Y++
Sbjct: 26 RLFDPLLKGGADWADIYFQSILSRDWLLEDGAVRTGSFVIDRGAGMRTVTGERQTLAYAN 85
Query: 342 DISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSIN---IREKIKL 398
+ ++L+ ++ ++ + + + + D + + N R++ L
Sbjct: 86 ALDWSSLMRCAETAGAMNAAGAAGAMPVPTRRGAPV--VTPVDDALLAANEDGARQR-AL 142
Query: 399 LERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRR 458
LE ++++AR DPRV V A E DV++I +DG +VAD+RPL L VT+ V +NGRR
Sbjct: 143 LETLDRLARGMDPRVTDVTATFQTETDVVMICGSDGRLVADVRPLTYLSVTVTVTENGRR 202
Query: 459 EIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLH 518
E SG G R ++FT LE+ +V+ AL NL A PAPAG+M VVLGPGWPGILLH
Sbjct: 203 ERAGSGGGSRTGLDFFTPERLERWARQAVDEALHNLGASPAPAGVMPVVLGPGWPGILLH 262
Query: 519 EAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTT 578
EA+GHGLE DF RKG+S FS +G+R+AS +T+VD+GTL RRGS+N+DDEG PT+ TT
Sbjct: 263 EAVGHGLEADFIRKGTSVFSKKLGERVASPGVTVVDDGTLPGRRGSLNVDDEGEPTRRTT 322
Query: 579 LIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSV 638
LIE+GIL G+M D+ +ARLM + TGN RRESFA +P+PRMTNT+M G PEEII+SV
Sbjct: 323 LIEDGILTGFMHDLTSARLMRAAPTGNGRRESFATLPLPRMTNTFMAAGTTPPEEIIASV 382
Query: 639 KNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIG 698
K G+YA+NFSGGQVDITNGKFVFS S+AY+I+NG++T PV+GATLIG G L+ + ++G
Sbjct: 383 KRGVYASNFSGGQVDITNGKFVFSMSRAYLIENGRLTRPVRGATLIGDGATALRHIPLVG 442
Query: 699 NDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
ND LD G G CGKD Q VPVGVG PTL+ID++TVGGT+
Sbjct: 443 NDPALDEGTGQCGKDAQQVPVGVGMPTLRIDALTVGGTD 481
>gi|343509018|ref|ZP_08746313.1| hypothetical protein VIS19158_04226 [Vibrio scophthalmi LMG 19158]
gi|342805775|gb|EGU41022.1| hypothetical protein VIS19158_04226 [Vibrio scophthalmi LMG 19158]
Length = 481
Score = 493 bits (1270), Expect = e-136, Method: Compositional matrix adjust.
Identities = 256/481 (53%), Positives = 344/481 (71%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N LL+P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 INHVEDALLKPGGLTEQDIANTLESIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSL 380
+ G+GVRA++G+KT F YSD I + L + + R IA Q NGK++ K +
Sbjct: 63 DCGLGVRAVTGEKTGFAYSDQIQLDGLKQSAIAARGIAQQGQNGKVQAFKRFDN---QAY 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ + ++ +K LL+ ++ R K+P + +V +LSG ++ +L+ DG D+
Sbjct: 120 YAAVNPLNCWEKEKKTALLKELDAYIRTKEPLIEEVSISLSGLHEQMLVAATDGTYAGDV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVS-----NSVNSALINLE 495
RPLV+L +T++ +K RRE G+SG GGR+NY+YF I + V+ ++ AL+NL+
Sbjct: 180 RPLVRLSITVLAQKGDRRERGSSGGGGRFNYDYFLTSIEGQNVAYQYADEAIRMALVNLD 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNRK SS FS IG+++ S TIVD+
Sbjct: 240 ADAAPAGTMPVVLGSGWPGVLLHEAVGHGLEGDFNRKESSVFSGRIGEKVTSNLCTIVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTL + RGS+N+DDEG Q TLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTLKDLRGSLNVDDEGVAGQYNTLIENGVLKGYMQDKLNARLMGVAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G+ PEEIIS+VK GLYA NF GGQVDIT+GKFVFS S+AY+I+NGKIT
Sbjct: 360 MPRMTNTYMLPGQHTPEEIISTVKKGLYAPNFGGGQVDITSGKFVFSTSEAYLIENGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G +++VSM+GND+ +D GVG+CGK GQ VPVGVGQPTLK+DSITVGG
Sbjct: 420 RPVKGATLIGSGLEAMQQVSMVGNDLSIDRGVGICGKAGQSVPVGVGQPTLKLDSITVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|416102618|ref|ZP_11588842.1| U62 family peptidase 2 TldD [Aggregatibacter actinomycetemcomitans
serotype c str. SCC2302]
gi|444337827|ref|ZP_21151751.1| U62 family peptidase 2 TldD [Aggregatibacter actinomycetemcomitans
serotype b str. SCC4092]
gi|348008606|gb|EGY48870.1| U62 family peptidase 2 TldD [Aggregatibacter actinomycetemcomitans
serotype c str. SCC2302]
gi|443546142|gb|ELT55838.1| U62 family peptidase 2 TldD [Aggregatibacter actinomycetemcomitans
serotype b str. SCC4092]
Length = 513
Score = 493 bits (1270), Expect = e-136, Method: Compositional matrix adjust.
Identities = 244/463 (52%), Positives = 330/463 (71%), Gaps = 5/463 (1%)
Query: 280 LLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFY 339
L + + + VDYAD YFQ +++ENW+LE+GI+K G F I++GVGVRA+SG+KT F Y
Sbjct: 51 LPNVFDTLAQRNVDYADLYFQLSQDENWVLEDGIIKEGGFHIDRGVGVRAVSGEKTGFAY 110
Query: 340 SDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLL 399
SD I+ L ++ R IA S + + Y + + S++ +KI+LL
Sbjct: 111 SDQINLANLQQCAQAVRGIAQPSQCNFILPVKFNPVDATLRYQPINPLHSLSQEQKIELL 170
Query: 400 ERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRRE 459
V++ AR +DPRV++V A LS Y+ +L+ DG + ADIRPL++L V+++VE++G+RE
Sbjct: 171 RLVDRTARAEDPRVVQVNAGLSMVYEEMLVAATDGTLAADIRPLIRLSVSVLVEQDGKRE 230
Query: 460 IGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPG 514
G +G GGR+ ++F + +V AL+NL A APAG+M VVLG GWPG
Sbjct: 231 RGGAGAGGRFALDWFFENYNGEQSAVYFAKEAVRQALVNLSAVAAPAGLMPVVLGAGWPG 290
Query: 515 ILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPT 574
+LLHEA+GHGLEGDFNRK SS F+ IG+ + S TIVD+GTL +RRGS+ +DDEG P+
Sbjct: 291 VLLHEAVGHGLEGDFNRKESSLFTGKIGELVTSPLCTIVDDGTLMDRRGSVTVDDEGVPS 350
Query: 575 QCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEI 634
Q LI+NGIL+ YMQD MNARLM + TGN RRES+AH+P+PRMTNTYML GK E++
Sbjct: 351 QHNVLIKNGILQKYMQDKMNARLMGVQPTGNGRRESYAHLPMPRMTNTYMLAGKDKFEDL 410
Query: 635 ISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKV 694
++SV+ G++A +F GGQVDIT+GKFVFS S+AY+I+ GKIT PVKGATLIG G +++ V
Sbjct: 411 VASVEQGIFAPHFGGGQVDITSGKFVFSTSEAYLIEKGKITKPVKGATLIGSGIEVMQNV 470
Query: 695 SMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
SM+ ++++LD GVG CGK+GQ VPVGVGQP LKID ITVGGTN
Sbjct: 471 SMVADEVELDHGVGTCGKEGQSVPVGVGQPALKIDQITVGGTN 513
>gi|302036857|ref|YP_003797179.1| protease TldD [Candidatus Nitrospira defluvii]
gi|190343272|gb|ACE75660.1| peptidase U62 [Candidatus Nitrospira defluvii]
gi|300604921|emb|CBK41254.1| Protease TldD [Candidatus Nitrospira defluvii]
Length = 478
Score = 493 bits (1270), Expect = e-136, Method: Compositional matrix adjust.
Identities = 249/468 (53%), Positives = 332/468 (70%), Gaps = 1/468 (0%)
Query: 270 LEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRA 329
L F + ++ + + LG + + VDYAD YF++ ++E+ +EEGIVK S+ QGVGVRA
Sbjct: 9 LARFGVTDREIEQALGRVKVSTVDYADLYFEYCQSESVSMEEGIVKRATKSVGQGVGVRA 68
Query: 330 ISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISS 389
+G+KT F YSD+++ L A + R IAN + G + + +LY
Sbjct: 69 TAGEKTGFAYSDELTPKDLNIAADTARYIANSAQGTAPVPVTHRPALARNLYPHDRADIE 128
Query: 390 INIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVT 449
+ R+++ LL ++ AR DPR+ V+A + EY V+L+ +DGL+V DI+PL +L VT
Sbjct: 129 VATRDRVTLLNAIDAEARRYDPRIKNVMAAYNTEYKVMLVATSDGLMVGDIQPLSRLQVT 188
Query: 450 IIVEKNGRREIGNSGCGGRYNYNYFT-DMILEKCVSNSVNSALINLEAKPAPAGIMKVVL 508
I E+NG R++G G GGR YF D + + A++NL A APAG+M VVL
Sbjct: 189 CIAEENGNRQVGTFGGGGRIGLEYFQNDQRYLQFAREAAREAILNLSAVDAPAGVMPVVL 248
Query: 509 GPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINID 568
G GWPGILLHEAIGHGLE DFNRK +SAFSN +GK++AS+ TIVD+GTL RRGS+N+D
Sbjct: 249 GGGWPGILLHEAIGHGLEADFNRKKTSAFSNLLGKKVASEVCTIVDDGTLPFRRGSLNVD 308
Query: 569 DEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGK 628
DEG P+ T LIE GIL+GY+ D +NARLM + +TGN RRES+ + +PRMTNT+ML G+
Sbjct: 309 DEGTPSSRTVLIERGILRGYITDKLNARLMGIPLTGNGRRESYQSVVLPRMTNTFMLAGE 368
Query: 629 FHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGP 688
P++II SVK GLYA +F GGQVDITNGKFVFSAS+AY+I++G+IT PVKGATLIG GP
Sbjct: 369 SDPKDIIKSVKKGLYAVSFGGGQVDITNGKFVFSASEAYLIEDGQITKPVKGATLIGSGP 428
Query: 689 NILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
+ILK+VSM+G+D+KLD G+G CGK+GQ VPVGVG PT++ID ITVGGT
Sbjct: 429 DILKQVSMVGHDLKLDEGIGTCGKEGQSVPVGVGLPTIRIDEITVGGT 476
>gi|21672659|ref|NP_660726.1| TldD protein [Buchnera aphidicola str. Sg (Schizaphis graminum)]
gi|25009477|sp|Q8K9F2.1|TLDD_BUCAP RecName: Full=Protein TldD homolog
gi|21623295|gb|AAM67937.1| tldd protein [Buchnera aphidicola str. Sg (Schizaphis graminum)]
Length = 483
Score = 493 bits (1270), Expect = e-136, Method: Compositional matrix adjust.
Identities = 246/489 (50%), Positives = 340/489 (69%), Gaps = 23/489 (4%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L + LL ++ + + L + + +DY DFYFQ E+W LE GI+K G++ +
Sbjct: 3 LELVTESLLTKNQINHQDVFSCLEDFCTHNIDYGDFYFQSRICESWSLENGIIKEGDYHL 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNG-KIKIIKNIKK----IK 376
+QGVGVRA+SG+ T F Y+D IS + + + +SI ++ KIK + N +K
Sbjct: 63 DQGVGVRAVSGETTGFSYADQISIDAVRKSAHMAKSIFDKKEKIKIKPLLNQEKKFFYDP 122
Query: 377 INSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLI 436
IN L +FT + EK LL +V+ IAR D RV++V ANLSG Y+ IL+ +G +
Sbjct: 123 INPLKTFTSS-------EKTNLLYKVDHIARKTDNRVVQVNANLSGSYEEILVVSTEGNL 175
Query: 437 VADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKC---------VSNSV 487
DIRPLV+ V+++VE+ GRRE G SG G R NY++F + + C +V
Sbjct: 176 ATDIRPLVEFSVSVLVEERGRREKGRSGGGSRTNYSFF--ITQDDCFGENRIDYWTKEAV 233
Query: 488 NSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIAS 547
AL+NL + AP+G VVLG GWPG+LLHEA+GHGLEGDFNR+G+S F+N I K++AS
Sbjct: 234 RIALLNLSSHEAPSGTFPVVLGSGWPGVLLHEAVGHGLEGDFNRRGTSIFTNMIEKKVAS 293
Query: 548 KEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNAR 607
+ TI+D+GT+ N+RGS+NIDDEG P QC LIENGILK YMQD +NARLMN TGN R
Sbjct: 294 ELCTIIDDGTMKNQRGSLNIDDEGVPGQCNVLIENGILKKYMQDKLNARLMNTKSTGNGR 353
Query: 608 RESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAY 667
RES++H+P+PRMTNTYM+ GK E+II+SV G+YA NFSGGQVDIT+G+FVFS S+AY
Sbjct: 354 RESYSHLPMPRMTNTYMIPGKSKLEDIINSVDYGIYAINFSGGQVDITSGQFVFSTSEAY 413
Query: 668 IIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLK 727
++K GKI P++ TLIG G +++++SM+GND+K+D G+G+CGKDGQ +PVG+GQP++K
Sbjct: 414 LVKKGKIFSPIRNTTLIGSGLEVMQQISMVGNDLKMDQGMGMCGKDGQNIPVGIGQPSIK 473
Query: 728 IDSITVGGT 736
++ +TVGGT
Sbjct: 474 LEKLTVGGT 482
>gi|83591906|ref|YP_425658.1| microcin-processing peptidase 2 [Rhodospirillum rubrum ATCC 11170]
gi|386348600|ref|YP_006046848.1| microcin-processing peptidase 2 [Rhodospirillum rubrum F11]
gi|83574820|gb|ABC21371.1| microcin-processing peptidase 2. Unknown type peptidase. MEROPS
family U62 [Rhodospirillum rubrum ATCC 11170]
gi|346717036|gb|AEO47051.1| microcin-processing peptidase 2 [Rhodospirillum rubrum F11]
Length = 480
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 230/446 (51%), Positives = 324/446 (72%), Gaps = 5/446 (1%)
Query: 293 DYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAV 352
D + + ++ ++E++ L++G ++ +F QG G+RA+SG+ F ++ + + L AV
Sbjct: 34 DDGELFLEYRQSESFSLDDGRIRGASFDTTQGFGLRAVSGEAVGFAHASTLDQGALKRAV 93
Query: 353 KSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPR 412
++ R++ ++G + + +LY+ + + I+ K++ L ++ AR +DP+
Sbjct: 94 ETVRAVRGGASGTVALPPAATN---RALYTPDNPLDRIDFTTKVETLSAIDAHARSRDPK 150
Query: 413 VIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVE-KNGRREIGNSGCGGRYNY 471
V++V+A+L+G + + I G V+D+RPLV+L V+++VE NGRRE G+ G GGR Y
Sbjct: 151 VVQVMASLTGSWQAVRILGAGGRDVSDLRPLVRLNVSVVVEGANGRRETGSHGLGGRVGY 210
Query: 472 N-YFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFN 530
+ + + V ++ AL+NLE+ APAG M VVLGPGWPGILLHEAIGHGLEGD N
Sbjct: 211 DGLLEESTWKAAVEEALRQALVNLESIDAPAGEMPVVLGPGWPGILLHEAIGHGLEGDGN 270
Query: 531 RKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQ 590
RKG+SAFS +GKR+A+ +TIVD+GT+A+RRGS++IDDEG PT T +IE+GIL GY+Q
Sbjct: 271 RKGTSAFSEGLGKRVAAPGVTIVDDGTIADRRGSLSIDDEGTPTARTVIIEDGILTGYLQ 330
Query: 591 DIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGG 650
D +NARLM M TGN RR+S+AH P+PRMTNT+ML G P I+ SVK GLYA NF GG
Sbjct: 331 DRLNARLMGMKPTGNGRRQSYAHHPLPRMTNTFMLAGADDPAAILGSVKRGLYAVNFGGG 390
Query: 651 QVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVC 710
QVD T+GKFVFSAS+AY+I+NG+I PVKGATLIG+GP++L +VSM+GND+ LDPG+G C
Sbjct: 391 QVDTTSGKFVFSASEAYLIENGRIGAPVKGATLIGNGPDVLTRVSMVGNDLALDPGIGTC 450
Query: 711 GKDGQMVPVGVGQPTLKIDSITVGGT 736
GK+GQ VPVGVGQPTLK+DS+TVGGT
Sbjct: 451 GKEGQGVPVGVGQPTLKVDSLTVGGT 476
>gi|261253977|ref|ZP_05946550.1| TldD protein probably a protease [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|417955204|ref|ZP_12598226.1| TldD protein probably a protease [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|260937368|gb|EEX93357.1| TldD protein probably a protease [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|342813657|gb|EGU48620.1| TldD protein probably a protease [Vibrio orientalis CIP 102891 =
ATCC 33934]
Length = 481
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 256/481 (53%), Positives = 341/481 (70%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N LL+ L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 INHVEDALLKSAGLSEQDIADTLASIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSL 380
+ GVGVRA++G+KT F YSD I L + + R IA Q NG+++ K S
Sbjct: 63 DCGVGVRAVAGEKTGFAYSDQIQLEGLKQSAIAARGIAQQGQNGQVQAFKRTDN---QSY 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
YS + + S +K +LL+ ++ R K+P + +V +LSG ++ +L+ DG DI
Sbjct: 120 YSAANPLESWAKEQKTQLLKELDAYIRTKEPLIKEVSVSLSGVHEQMLVAATDGTYAGDI 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTD-----MILEKCVSNSVNSALINLE 495
RPLV+L ++++ EK RRE G+SG GGR+ Y++F + ++ AL+NLE
Sbjct: 180 RPLVRLSISVLAEKGDRRERGSSGGGGRFGYDFFLSDSDGAKVAYHYADEAIRMALVNLE 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS FS +G+++ S TIVD+
Sbjct: 240 ADAAPAGMMPVVLGSGWPGVLLHEAVGHGLEGDFNRKESSVFSGKVGQKVTSDLCTIVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTL + RGS+N+DDEG Q TLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTLKDLRGSLNVDDEGVNGQYNTLIENGVLKGYMQDKLNARLMGVNPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G+ PEEIIS+V+ GLYA NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 360 MPRMTNTYMLPGEHSPEEIISTVEKGLYAPNFGGGQVDITSGKFVFSASEAYLIENGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G +++VSM+GND+ +D GVGVCGK GQ VPVGVGQPTLK+DSITVGG
Sbjct: 420 RPVKGATLIGSGIEAMQQVSMVGNDLSIDRGVGVCGKAGQSVPVGVGQPTLKLDSITVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|421852980|ref|ZP_16285662.1| DNA gyrase modulator TldD [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
gi|371478831|dbj|GAB30865.1| DNA gyrase modulator TldD [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
Length = 485
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 231/464 (49%), Positives = 331/464 (71%), Gaps = 9/464 (1%)
Query: 274 DLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGD 333
D EK+ L M + + + ++ ++E L++G++++ +F+ + G G+RA+ G+
Sbjct: 29 DDAEKLTKTALAGM-----EDGELFLEYRESEGISLDDGVIRSASFNTSSGFGLRAVLGE 83
Query: 334 KTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIR 393
+T F +SD++S+++L+ AV + ++ +G++ + LY+ + + +
Sbjct: 84 ETGFAHSDELSRSSLLRAVDAVSAVRAGRSGRMAAPPRATNQR---LYTDANPLGDSDFA 140
Query: 394 EKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVE 453
+ LL +++ AR KD RV++V+A+LSGE+ + I R DG AD+RPLV+L V+++VE
Sbjct: 141 TRSGLLSKIDAYARGKDSRVVQVMASLSGEWQAVQIMRADGTRAADLRPLVRLNVSVVVE 200
Query: 454 KNGRREIGNSGCGGRYNYN-YFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGW 512
+G+RE G+ G GGRY N + + V ++ AL+ LEA+PAPAG M+VVLG GW
Sbjct: 201 HDGKRESGSYGLGGRYEINRLLNEETWQGAVDEALRQALVALEAQPAPAGAMEVVLGAGW 260
Query: 513 PGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGN 572
PGILLHEA+GHGLEGDFNRKG+S F+ IGKR+AS +T+VD+G+L +RRGS+ IDDEG
Sbjct: 261 PGILLHEAVGHGLEGDFNRKGTSVFAGRIGKRVASPGVTVVDDGSLPDRRGSLTIDDEGT 320
Query: 573 PTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPE 632
PT T LIE+GIL+GY+QD +NARLM M+ TGN RR+S+AH+P+PRMTNT M G E
Sbjct: 321 PTGRTVLIEDGILQGYLQDRLNARLMGMAPTGNGRRQSYAHMPLPRMTNTIMQPGSSTSE 380
Query: 633 EIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILK 692
E+ISSVK GLYA +F GGQVDIT+GKFVF+AS+AY+I+NG++T PVKGATLIG G +
Sbjct: 381 EMISSVKRGLYAVHFGGGQVDITSGKFVFAASEAYLIENGRVTAPVKGATLIGSGAEAMT 440
Query: 693 KVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
+VSMIG +++LDPG+G CGK GQ VPVGVGQP LK+ +TVGGT
Sbjct: 441 QVSMIGGNLELDPGIGTCGKAGQGVPVGVGQPALKMTGLTVGGT 484
>gi|149189085|ref|ZP_01867373.1| predicted Zn-dependent protease [Vibrio shilonii AK1]
gi|148837048|gb|EDL53997.1| predicted Zn-dependent protease [Vibrio shilonii AK1]
Length = 479
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 250/474 (52%), Positives = 343/474 (72%), Gaps = 7/474 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I++GVGVR
Sbjct: 8 LLGPTGLSEQDIEATLASIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNIDRGVGVR 67
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A++G+KT F YSD I+ + L + + R IA Q G+ + + + + Y+ + +
Sbjct: 68 AVAGEKTGFAYSDQITLDGLKQSAVAARGIAQQ--GQSAQVNALTRRDNQAYYAAVNPLE 125
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
S ++K +LL++++ R K+P V +V +LSG Y+ +L+ DG D+RPLV+L +
Sbjct: 126 SWEKQQKTELLKQLDAYIRTKEPLVKEVSVSLSGVYEQMLVAATDGTFAGDVRPLVRLSI 185
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEAKPAPAGI 503
+++ +K RRE G++G GGRY Y++F + ++ AL+NLEA APAG
Sbjct: 186 SVLAQKGDRRERGSAGGGGRYGYDFFLSTEEGQQVAYNYADEAIRQALVNLEAIDAPAGT 245
Query: 504 MKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRG 563
M VVLG GWPG+LLHEA+GHGLEGDFNRK SS FS +G+++ S TIVD+GTL + RG
Sbjct: 246 MPVVLGSGWPGVLLHEAVGHGLEGDFNRKESSVFSGKVGQQVTSNLCTIVDDGTLQDLRG 305
Query: 564 SINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTY 623
S+N+DDEG Q TLIENG LKGYMQD +NARLM ++ TGNARRES+AH+P+PRMTNTY
Sbjct: 306 SLNVDDEGVHGQYNTLIENGTLKGYMQDKLNARLMGVNPTGNARRESYAHLPMPRMTNTY 365
Query: 624 MLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATL 683
ML G+ PEEIIS+VK GLYA NF GGQVDIT+GKFVFSAS+AY+I++GKIT PVKGATL
Sbjct: 366 MLPGEHSPEEIISTVKKGLYAPNFGGGQVDITSGKFVFSASEAYLIEDGKITAPVKGATL 425
Query: 684 IGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
IG G +++VSM+GND+ +D GVGVCGK GQ VPVGVGQP+LK+D++TVGGT+
Sbjct: 426 IGSGIEAMQQVSMVGNDLSIDRGVGVCGKAGQSVPVGVGQPSLKLDALTVGGTD 479
>gi|258543631|ref|YP_003189064.1| DNA gyrase modulator TldD [Acetobacter pasteurianus IFO 3283-01]
gi|384043549|ref|YP_005482293.1| DNA gyrase modulator TldD [Acetobacter pasteurianus IFO 3283-12]
gi|384052066|ref|YP_005479129.1| DNA gyrase modulator TldD [Acetobacter pasteurianus IFO 3283-03]
gi|384055175|ref|YP_005488269.1| DNA gyrase modulator TldD [Acetobacter pasteurianus IFO 3283-07]
gi|384058408|ref|YP_005491075.1| DNA gyrase modulator TldD [Acetobacter pasteurianus IFO 3283-22]
gi|384061049|ref|YP_005500177.1| DNA gyrase modulator TldD [Acetobacter pasteurianus IFO 3283-26]
gi|384064341|ref|YP_005484983.1| DNA gyrase modulator TldD [Acetobacter pasteurianus IFO 3283-32]
gi|384120354|ref|YP_005502978.1| DNA gyrase modulator TldD [Acetobacter pasteurianus IFO
3283-01-42C]
gi|421849038|ref|ZP_16282023.1| DNA gyrase modulator TldD [Acetobacter pasteurianus NBRC 101655]
gi|256634709|dbj|BAI00685.1| DNA gyrase modulator TldD [Acetobacter pasteurianus IFO 3283-01]
gi|256637765|dbj|BAI03734.1| DNA gyrase modulator TldD [Acetobacter pasteurianus IFO 3283-03]
gi|256640819|dbj|BAI06781.1| DNA gyrase modulator TldD [Acetobacter pasteurianus IFO 3283-07]
gi|256643874|dbj|BAI09829.1| DNA gyrase modulator TldD [Acetobacter pasteurianus IFO 3283-22]
gi|256646929|dbj|BAI12877.1| DNA gyrase modulator TldD [Acetobacter pasteurianus IFO 3283-26]
gi|256649982|dbj|BAI15923.1| DNA gyrase modulator TldD [Acetobacter pasteurianus IFO 3283-32]
gi|256652972|dbj|BAI18906.1| DNA gyrase modulator TldD [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256656026|dbj|BAI21953.1| DNA gyrase modulator TldD [Acetobacter pasteurianus IFO 3283-12]
gi|371460307|dbj|GAB27226.1| DNA gyrase modulator TldD [Acetobacter pasteurianus NBRC 101655]
Length = 485
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 231/464 (49%), Positives = 331/464 (71%), Gaps = 9/464 (1%)
Query: 274 DLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGD 333
D EK+ L M + + + ++ ++E L++G++++ +F+ + G G+RA+ G+
Sbjct: 29 DDAEKLTKTALAGM-----EDGELFLEYRESEGISLDDGVIRSASFNTSSGFGLRAVLGE 83
Query: 334 KTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIR 393
+T F +SD++S+++L+ AV + ++ +G++ + LY+ + + +
Sbjct: 84 ETGFAHSDELSRSSLLRAVDAVSAVRAGRSGQMAAPPRATNQR---LYTDANPLGDSDFA 140
Query: 394 EKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVE 453
+ LL +++ AR KD RV++V+A+LSGE+ + I R DG AD+RPLV+L V+++VE
Sbjct: 141 TRSGLLSKIDAYARGKDSRVVQVMASLSGEWQAVQIMRADGTRAADLRPLVRLNVSVVVE 200
Query: 454 KNGRREIGNSGCGGRYNYN-YFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGW 512
+G+RE G+ G GGRY N + + V ++ AL+ LEA+PAPAG M+VVLG GW
Sbjct: 201 HDGKRESGSYGLGGRYEINRLLNEETWQGAVDEALRQALVALEAQPAPAGAMEVVLGAGW 260
Query: 513 PGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGN 572
PGILLHEA+GHGLEGDFNRKG+S F+ IGKR+AS +T+VD+G+L +RRGS+ IDDEG
Sbjct: 261 PGILLHEAVGHGLEGDFNRKGTSVFAGRIGKRVASPGVTVVDDGSLPDRRGSLTIDDEGT 320
Query: 573 PTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPE 632
PT T LIE+GIL+GY+QD +NARLM M+ TGN RR+S+AH+P+PRMTNT M G E
Sbjct: 321 PTGRTVLIEDGILQGYLQDRLNARLMGMAPTGNGRRQSYAHMPLPRMTNTIMQPGSSTTE 380
Query: 633 EIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILK 692
E+ISSVK GLYA +F GGQVDIT+GKFVF+AS+AY+I+NG++T PVKGATLIG G +
Sbjct: 381 EMISSVKRGLYAVHFGGGQVDITSGKFVFAASEAYLIENGRVTAPVKGATLIGSGAEAMT 440
Query: 693 KVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
+VSMIG +++LDPG+G CGK GQ VPVGVGQP LK+ +TVGGT
Sbjct: 441 QVSMIGGNLELDPGIGTCGKAGQGVPVGVGQPALKMTGLTVGGT 484
>gi|423946458|ref|ZP_17733366.1| modulator of DNA gyrase family protein [Vibrio cholerae HE-40]
gi|423975617|ref|ZP_17736915.1| modulator of DNA gyrase family protein [Vibrio cholerae HE-46]
gi|408662161|gb|EKL33133.1| modulator of DNA gyrase family protein [Vibrio cholerae HE-40]
gi|408666245|gb|EKL37041.1| modulator of DNA gyrase family protein [Vibrio cholerae HE-46]
Length = 481
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 253/481 (52%), Positives = 341/481 (70%), Gaps = 7/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N + LL P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 MNQIETALLAPAGLTEQDIADTLSSIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+ GVGVRA+SG+KT F YSD I L + + R IA Q G+ ++ K+ + Y
Sbjct: 63 DCGVGVRAVSGEKTGFAYSDQIQLEGLRQSAIAARGIAQQ--GQNLTVQAFKRGQHPVFY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + S ++K +LL++++ R K+P + +V +LSG ++ IL+ DG DIR
Sbjct: 121 GAHNPLESWEKQQKTELLKQLDAYIRTKEPLITEVSVSLSGVHEQILVAATDGTYAGDIR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L ++++ +K RRE G++G GGR+ Y+YF I ++ AL+NLEA
Sbjct: 181 PLVRLSISVLAQKGDRRERGSAGGGGRFGYDYFLQEEAGQKIAFSFADEAIRQALVNLEA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS F+ +GK++ S TIVD+G
Sbjct: 241 VAAPAGTMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSVFAGKVGKKVTSDLCTIVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL + RGS+N+DDEG Q LIE GILKGY+QD +NARLM ++ TGN RRES+AH+P+
Sbjct: 301 TLKDLRGSLNVDDEGVSGQYNVLIEKGILKGYIQDKLNARLMGVAPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ PEEII+SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 361 PRMTNTYMLPGEHTPEEIIASVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIENGKITR 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG G +++VSM+GND+ LD GVGVCGK GQ VPVGVGQPTLK+D++TVGGT
Sbjct: 421 PIKGATLIGSGIEAMQQVSMVGNDLALDRGVGVCGKAGQSVPVGVGQPTLKLDALTVGGT 480
Query: 737 N 737
Sbjct: 481 E 481
>gi|219681754|ref|YP_002468140.1| TldD protein [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)]
gi|257471455|ref|ZP_05635454.1| TldD protein [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)]
gi|384226706|ref|YP_005618457.1| TldD protein [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)]
gi|219624597|gb|ACL30752.1| TldD protein [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)]
gi|311087803|gb|ADP67882.1| TldD protein [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)]
Length = 483
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 242/476 (50%), Positives = 337/476 (70%), Gaps = 11/476 (2%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL ++++ + L + ++DY D YFQ +E+WILE I+K GN+ + G+GVR
Sbjct: 10 LLNANKINDQDVFIALEELCTRQLDYGDLYFQSHIHESWILENSIIKEGNYHSDAGIGVR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSI-ANQSNGKIKIIKNIKKIKINSLYSFTDTI 387
AI G+ T F YSD IS ++L + K SI + +GK K + K I +Y + +
Sbjct: 70 AIRGESTGFAYSDQISLDSLRRSTKKAHSIILTKGSGKTK---TLSKKTIEPIYKNVNPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
+ +EK LL R IAR D RVI+V A+L+G Y+ IL+ DG +V+DIRP +Q
Sbjct: 127 EGFSSKEKTDLLYRANYIARSLDHRVIEVNASLTGSYEQILVASTDGNLVSDIRPSIQFS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-------TDMILEKCVSNSVNSALINLEAKPAP 500
++++VE +G+RE G SG G R +YN+F ++ ++ +V AL+NL +K AP
Sbjct: 187 ISVLVEDHGKRERGRSGGGSRTDYNFFLNQDDFSKEIRIDHWSKEAVRIALLNLSSKEAP 246
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
+G VVLG GWPG+LLHEAIGHGLEGDFNRKG+S F+N IGK++AS+ TI+D+GT+ N
Sbjct: 247 SGTFPVVLGSGWPGVLLHEAIGHGLEGDFNRKGTSIFTNMIGKKVASELCTIIDDGTIKN 306
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
+RGS++IDDEG P Q LIENGILK YMQD +NARLM + TGN RRES++ +P+PRMT
Sbjct: 307 QRGSLSIDDEGTPGQKNILIENGILKKYMQDKLNARLMGVKSTGNGRRESYSCLPMPRMT 366
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYML+GK ++II SV G+YA NFSGGQVDIT+GKFVFS S+AY+IKNGKI P+K
Sbjct: 367 NTYMLSGKSKLDDIIKSVDYGIYAVNFSGGQVDITSGKFVFSTSEAYLIKNGKIVTPIKN 426
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
TLIG G +++K+SM+G+D+K+D G+G+CGKDGQ +PVG+GQP++K++++T+GGT
Sbjct: 427 TTLIGSGLEVMQKISMVGDDLKMDEGMGICGKDGQNIPVGIGQPSMKLENLTIGGT 482
>gi|417819305|ref|ZP_12465922.1| modulator of DNA gyrase family protein [Vibrio cholerae HE39]
gi|340041161|gb|EGR02128.1| modulator of DNA gyrase family protein [Vibrio cholerae HE39]
Length = 479
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 253/481 (52%), Positives = 341/481 (70%), Gaps = 7/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N + LL P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 1 MNQIETALLAPAGLTEQDIADTLSSIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 60
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+ GVGVRA+SG+KT F YSD I L + + R IA Q G+ ++ K+ + Y
Sbjct: 61 DCGVGVRAVSGEKTGFAYSDQIQLEGLRQSAIAARGIAQQ--GQNLTVQAFKRGQHPVFY 118
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + S ++K +LL++++ R K+P + +V +LSG ++ IL+ DG DIR
Sbjct: 119 GAHNPLESWEKQQKTELLKQLDAYIRTKEPLITEVSVSLSGVHEQILVAATDGTYAGDIR 178
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L ++++ +K RRE G++G GGR+ Y+YF I ++ AL+NLEA
Sbjct: 179 PLVRLSISVLAQKGDRRERGSAGGGGRFGYDYFLQEEAGQKIAFSFADEAIRQALVNLEA 238
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS F+ +GK++ S TIVD+G
Sbjct: 239 VAAPAGTMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSVFAGKVGKKVTSDLCTIVDDG 298
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL + RGS+N+DDEG Q LIE GILKGY+QD +NARLM ++ TGN RRES+AH+P+
Sbjct: 299 TLKDLRGSLNVDDEGVSGQYNVLIEKGILKGYIQDKLNARLMGVAPTGNGRRESYAHLPM 358
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ PEEII+SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 359 PRMTNTYMLPGEHTPEEIIASVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIENGKITR 418
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG G +++VSM+GND+ LD GVGVCGK GQ VPVGVGQPTLK+D++TVGGT
Sbjct: 419 PIKGATLIGSGIEAMQQVSMVGNDLALDRGVGVCGKAGQSVPVGVGQPTLKLDALTVGGT 478
Query: 737 N 737
Sbjct: 479 E 479
>gi|414562756|ref|YP_005617947.1| TldD protein [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)]
gi|311087292|gb|ADP67372.1| TldD protein [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)]
Length = 483
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 242/476 (50%), Positives = 337/476 (70%), Gaps = 11/476 (2%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL ++++ + L + ++DY D YFQ +E+WILE I+K GN+ + G+GVR
Sbjct: 10 LLNANKINDQDVFIALEELCTRQLDYGDLYFQSHIHESWILENNIIKEGNYHSDAGIGVR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSI-ANQSNGKIKIIKNIKKIKINSLYSFTDTI 387
AI G+ T F YSD IS ++L + K SI + +GK K + K I +Y + +
Sbjct: 70 AIRGESTGFAYSDQISLDSLRRSTKKAHSIILTKGSGKTK---TLSKKTIEPIYKNVNPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
+ +EK LL R IAR D RVI+V A+L+G Y+ IL+ DG +V+DIRP +Q
Sbjct: 127 EGFSSKEKTDLLYRANYIARSLDHRVIEVNASLTGSYEQILVASTDGNLVSDIRPSIQFS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-------TDMILEKCVSNSVNSALINLEAKPAP 500
++++VE +G+RE G SG G R +YN+F ++ ++ +V AL+NL +K AP
Sbjct: 187 ISVLVEDHGKRERGRSGGGSRTDYNFFLNQDDFSKEIRIDHWSKEAVRIALLNLSSKEAP 246
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
+G VVLG GWPG+LLHEAIGHGLEGDFNRKG+S F+N IGK++AS+ TI+D+GT+ N
Sbjct: 247 SGTFPVVLGSGWPGVLLHEAIGHGLEGDFNRKGTSIFTNMIGKKVASELCTIIDDGTIKN 306
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
+RGS++IDDEG P Q LIENGILK YMQD +NARLM + TGN RRES++ +P+PRMT
Sbjct: 307 QRGSLSIDDEGTPGQKNILIENGILKKYMQDKLNARLMGVKSTGNGRRESYSCLPMPRMT 366
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYML+GK ++II SV G+YA NFSGGQVDIT+GKFVFS S+AY+IKNGKI P+K
Sbjct: 367 NTYMLSGKSKLDDIIKSVDYGIYAVNFSGGQVDITSGKFVFSTSEAYLIKNGKIVTPIKN 426
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
TLIG G +++K+SM+G+D+K+D G+G+CGKDGQ +PVG+GQP++K++++T+GGT
Sbjct: 427 TTLIGSGLEVMQKISMVGDDLKMDEGMGICGKDGQNIPVGIGQPSMKLENLTIGGT 482
>gi|119773614|ref|YP_926354.1| TldD protein [Shewanella amazonensis SB2B]
gi|119766114|gb|ABL98684.1| microcin-processing peptidase 2. Unknown type peptidase. MEROPS
family U62 [Shewanella amazonensis SB2B]
Length = 482
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 255/480 (53%), Positives = 344/480 (71%), Gaps = 10/480 (2%)
Query: 263 NIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSIN 322
+ +S+L LD L + L + + VD++D YFQ +++E W+LE+GI+K G+F I
Sbjct: 6 QVEQSLLANNLSLDN--LAEYLKLIHNHNVDFSDLYFQGSRHETWVLEDGIIKEGSFHIE 63
Query: 323 QGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYS 382
+GVGVRAISG+KT F Y+D+I+ L A + R IA G +K K+ +LY
Sbjct: 64 RGVGVRAISGEKTGFAYADEITPAALEAAALAARGIAQV--GSDYQVKAWKRQGAKTLYD 121
Query: 383 FTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRP 442
D I+++ KI +L + + R D R+I+V+ +LS ++ IL+ +DG + ADIRP
Sbjct: 122 SADPIAAMEEATKIAMLRQADAYIRSLDSRIIQVVVSLSAVHEEILVAASDGTLAADIRP 181
Query: 443 LVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF---TDMILEKCVS---NSVNSALINLEA 496
LV+ ++I+E+NG+RE G +G GGR+++ D + C + +V A +NL A
Sbjct: 182 LVRFNCSVIMEENGKRERGGAGGGGRHDFAPLFANDDTGMPVCFAFAREAVRQAQVNLNA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLGPGWPG+LLHEA+GHGLEGDFNRKGSSAFS +G+++ASK +T+VD+G
Sbjct: 242 VDAPAGEMPVVLGPGWPGVLLHEAVGHGLEGDFNRKGSSAFSGKVGQQVASKLVTVVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL RRGS+ IDDEG P T LIENGILKGYMQD +NARLM ++ TGN RRES+AH+P+
Sbjct: 302 TLPGRRGSLTIDDEGVPAHRTVLIENGILKGYMQDKLNARLMGVAPTGNGRRESYAHLPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYM G +P +II SV+ G+YA NF GGQVDIT+GKFVFSAS+AY+I+ G+IT
Sbjct: 362 PRMTNTYMTAGNDNPADIIKSVEKGIYAPNFGGGQVDITSGKFVFSASEAYLIEKGEITR 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
+KGATLIG+GP + ++SM+GND++LD GVGVCGKDGQ VPVGVGQPTL++D +TVGGT
Sbjct: 422 AIKGATLIGNGPEAMSQISMVGNDLELDKGVGVCGKDGQSVPVGVGQPTLRLDRLTVGGT 481
>gi|144898626|emb|CAM75490.1| Peptidase U62, modulator of DNA gyrase [Magnetospirillum
gryphiswaldense MSR-1]
Length = 506
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 237/507 (46%), Positives = 344/507 (67%), Gaps = 8/507 (1%)
Query: 233 VLDNKLPIPSTIINQVKNCILISQKNIHP-LNIARSILLEPFDLDEKILLKILGNMFKNK 291
L + LPIP + + + P ++ A + LD+ + I+G
Sbjct: 3 TLGHDLPIPDRLAHALPAPPTRPAGAFMPHVSQAHQLFFTRAGLDQDKVTAIVGEALTG- 61
Query: 292 VDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINA 351
D + + ++ ++E+ +L++ +K+ NF QG G+R++ G+ + + +S+ + A
Sbjct: 62 ADDGELFLEYRQSESMVLDDRQIKSANFDTAQGFGLRSVVGEAHGYAHGSVLSEEAIRRA 121
Query: 352 VKSTRSIANQSNGKIKIIKNIKKIKINS-LYSFTDTISSINIREKIKLLERVEKIARLKD 410
+ +++ N +G + + NS LY+ + ++ + +K+KLLE ++ AR K+
Sbjct: 122 GDTVKAVRNGHSGTMAA----APMGTNSALYTDINPLNLVPFADKVKLLEAMDAYARGKE 177
Query: 411 PRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYN 470
PR+ +V A+L+G + + I R DG ADIRPLV+L V++++ R E G+ G GGR+
Sbjct: 178 PRLRQVSASLTGSWQAVFIQRADGSHAADIRPLVRLNVSVVMGDGDRMETGSHGIGGRFT 237
Query: 471 YNYFTDM-ILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDF 529
Y D CV ++ A INL++ PAPAG M VVLGPGWPG++LHEA+GHGLEGDF
Sbjct: 238 YERMIDEGSWRACVDEAIRQAAINLDSIPAPAGEMSVVLGPGWPGVMLHEAVGHGLEGDF 297
Query: 530 NRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYM 589
NRKG+SAFS IG+R+A+K +T+VD+GT+ +RRGS+++DDEG PT TTLIE+GIL GY+
Sbjct: 298 NRKGTSAFSGMIGQRVAAKGVTVVDDGTMVDRRGSLSVDDEGTPTSRTTLIEDGILVGYI 357
Query: 590 QDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSG 649
QD +NARLM + TGN RR+S+AH PIPRMTNT+M+ G P EII+SVK G+YA NF G
Sbjct: 358 QDRLNARLMGVKPTGNGRRQSYAHAPIPRMTNTFMVAGGHDPAEIIASVKKGIYAVNFGG 417
Query: 650 GQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGV 709
GQVDIT+GKFVF+A++AY+I++GKI VKGATLIG+GP+ + KV+MIGND++LDPG+G
Sbjct: 418 GQVDITSGKFVFAATEAYLIEDGKIGPAVKGATLIGNGPDAMNKVTMIGNDLELDPGIGT 477
Query: 710 CGKDGQMVPVGVGQPTLKIDSITVGGT 736
CGKDGQ VPVGVGQPTL++D +TVGGT
Sbjct: 478 CGKDGQGVPVGVGQPTLRMDGLTVGGT 504
>gi|332188187|ref|ZP_08389916.1| modulator of DNA gyrase family protein [Sphingomonas sp. S17]
gi|332011794|gb|EGI53870.1| modulator of DNA gyrase family protein [Sphingomonas sp. S17]
Length = 477
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 232/463 (50%), Positives = 326/463 (70%), Gaps = 6/463 (1%)
Query: 275 LDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDK 334
LD L++ N + D + Y Q+ ++E + ++G +KT ++ + G G+RA+SG+
Sbjct: 16 LDPDAALRLTANALA-RADDGELYLQYKRSEAFGFDDGRLKTASYDTHSGFGLRAVSGEM 74
Query: 335 TAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIRE 394
TAF +++++S+ + A ++ I + + LY+ TD + I E
Sbjct: 75 TAFAHANELSEAAIQRAAQTMALIDPAKGNAAPPPQGTNR----HLYTATDPLDLIPFAE 130
Query: 395 KIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEK 454
K+ L + ++ AR +DPRV++V LSG + V+ I R DG + D+RPLV+L ++++VE+
Sbjct: 131 KVSLCQTIDAAARARDPRVVQVSVGLSGSWSVVEIVRADGFVATDVRPLVRLNISVVVEQ 190
Query: 455 NGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWP 513
NGRRE G+ G GGRY Y+ E+ + ++ AL+NL++ APAG M V+LGPGWP
Sbjct: 191 NGRRETGSFGIGGRYLYDRLVARETWERGIDVALAQALVNLDSVAAPAGEMTVLLGPGWP 250
Query: 514 GILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNP 573
G+LLHEAIGHGLEGDFNRKG+SAFS IG+R+A+ +T+VD+G+LA+RRGS++IDDEG P
Sbjct: 251 GVLLHEAIGHGLEGDFNRKGTSAFSGRIGERVAAPGVTVVDDGSLADRRGSLSIDDEGTP 310
Query: 574 TQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEE 633
T+ LIE+GILKGYMQD +NARLM ++ TGN RRESFAH P+PRMTNT+M G+ P E
Sbjct: 311 TREVVLIEDGILKGYMQDRLNARLMGVAPTGNGRRESFAHAPMPRMTNTFMKGGQDDPAE 370
Query: 634 IISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKK 693
++S VKNG++A +F GGQVDI +GKFVFS ++AY I+NGK+ P+KGATLIG GP++L K
Sbjct: 371 LLSRVKNGIFAKSFGGGQVDIVSGKFVFSCTEAYRIENGKLGAPIKGATLIGDGPSVLTK 430
Query: 694 VSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
V+ IGND LD GVGVCGK GQ VP GVGQPTL ++ +TVGGT
Sbjct: 431 VTGIGNDFALDEGVGVCGKGGQSVPAGVGQPTLLVEGLTVGGT 473
>gi|329113798|ref|ZP_08242569.1| Protein TldD-like protein [Acetobacter pomorum DM001]
gi|326696808|gb|EGE48478.1| Protein TldD-like protein [Acetobacter pomorum DM001]
Length = 496
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 231/464 (49%), Positives = 332/464 (71%), Gaps = 9/464 (1%)
Query: 274 DLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGD 333
D EK+ L M + + + ++ ++E L++G++++ +F+ + G G+RA+ G+
Sbjct: 40 DDAEKLTKTALAGM-----EDGELFLEYRESEGIALDDGVIRSASFNTSSGFGLRAVLGE 94
Query: 334 KTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIR 393
+T F +SD++S+++L+ AV + ++ +G++ + + LY+ + + +
Sbjct: 95 ETGFAHSDELSRSSLLRAVDAVSAVRAGRSGQMA---SPPRATNQRLYTDANPLGDSDFA 151
Query: 394 EKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVE 453
+ LL +++ AR KD RV++V+A+LSGE+ + I R DG AD+RPLV+L V+++VE
Sbjct: 152 TRSGLLSKIDAYARGKDNRVVQVMASLSGEWQAVQIMRADGTRAADLRPLVRLNVSVVVE 211
Query: 454 KNGRREIGNSGCGGRYNYN-YFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGW 512
+G+RE G+ G GGRY N + + V ++ AL+ LEA+PAPAG M+VVLG GW
Sbjct: 212 HDGKRESGSYGLGGRYEINRLLNEETWQGAVDEALRQALVALEAQPAPAGAMEVVLGAGW 271
Query: 513 PGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGN 572
PGILLHEA+GHGLEGDFNRKG+S F+ IGKR+AS +T+VD+G+L +RRGS+ IDDEG
Sbjct: 272 PGILLHEAVGHGLEGDFNRKGTSVFAGRIGKRVASPGVTVVDDGSLPDRRGSLTIDDEGT 331
Query: 573 PTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPE 632
PT T LIE+GIL+GY+QD +NARLM M+ TGN RR+S+AH+P+PRMTNT M G E
Sbjct: 332 PTGRTVLIEDGILQGYLQDRLNARLMGMAPTGNGRRQSYAHMPLPRMTNTIMQPGSSTTE 391
Query: 633 EIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILK 692
E+ISSVK GLYA +F GGQVDIT+GKFVF+AS+AY+I+NG++T PVKGATLIG G +
Sbjct: 392 EMISSVKRGLYAVHFGGGQVDITSGKFVFAASEAYLIENGRVTAPVKGATLIGSGAEAMT 451
Query: 693 KVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
+VSMIG +++LDPG+G CGK GQ VPVGVGQP LK+ +TVGGT
Sbjct: 452 QVSMIGGNLELDPGIGTCGKAGQGVPVGVGQPALKMTGLTVGGT 495
>gi|414342014|ref|YP_006983535.1| TldD protein [Gluconobacter oxydans H24]
gi|411027349|gb|AFW00604.1| TldD protein [Gluconobacter oxydans H24]
gi|453330124|dbj|GAC87847.1| DNA gyrase modulator TldD [Gluconobacter thailandicus NBRC 3255]
Length = 487
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 232/448 (51%), Positives = 320/448 (71%), Gaps = 6/448 (1%)
Query: 292 VDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINA 351
VD + + ++ +NE L++G +++ +F+ + G G+RA+ G +TAF +SD++S+ L A
Sbjct: 42 VDDGELFLEYRENEGISLDDGTIRSASFTTSSGFGLRAVLGTETAFAHSDEMSEEALARA 101
Query: 352 VKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDP 411
V + ++ G+ I+ + LY+ + + + + +L ++ AR D
Sbjct: 102 VSTVGAV---RQGRSGIMAPGPRSTNQRLYADSRPLEGTDFAARAAVLGEIDTYARALDS 158
Query: 412 RVIKVIANLSGEYDVILITR--NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRY 469
RV++V A+LS E+ + I R + G VAD+RPLV+L V+++VEK+GRRE G G GGRY
Sbjct: 159 RVVQVSASLSSEWQAVQIMRRADAGGRVADLRPLVRLNVSVVVEKDGRRESGGHGQGGRY 218
Query: 470 NYNYFTDM-ILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGD 528
+ D + V ++ AL+NL+A PAPAG M VVLGPGWPGILLHEA+GHGLEGD
Sbjct: 219 DLERLLDAETWKAAVDEALRQALLNLDATPAPAGEMDVVLGPGWPGILLHEAVGHGLEGD 278
Query: 529 FNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGY 588
FNRKG+S+F+ +GKR+A+ +T++D+GTL RRGS++IDDEG PT T LIE+GIL GY
Sbjct: 279 FNRKGTSSFTGMVGKRVAAPGVTVIDDGTLPERRGSLSIDDEGTPTGRTVLIEDGILTGY 338
Query: 589 MQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFS 648
+QD +NARLM +S TGN RRES+AH P+PRMTNT ML G EE+I S K GLYA NF
Sbjct: 339 LQDRLNARLMGVSPTGNGRRESYAHAPMPRMTNTVMLEGSATTEEMIRSTKRGLYAVNFG 398
Query: 649 GGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVG 708
GGQVDIT+GKFVF+AS+AY+I+NGK+T PVKGATLIG+G + + ++SMIG+D+ LDPG+G
Sbjct: 399 GGQVDITSGKFVFAASEAYLIENGKVTRPVKGATLIGNGADAMNQISMIGSDVALDPGIG 458
Query: 709 VCGKDGQMVPVGVGQPTLKIDSITVGGT 736
CGK GQ VPVGVGQPTLK+ +TVGGT
Sbjct: 459 TCGKAGQGVPVGVGQPTLKLSGLTVGGT 486
>gi|406945831|gb|EKD77221.1| hypothetical protein ACD_42C00436G0002, partial [uncultured
bacterium]
Length = 462
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 240/459 (52%), Positives = 322/459 (70%), Gaps = 3/459 (0%)
Query: 273 FDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISG 332
L+E L LG +D AD + Q T+ E+WIL++GIVK G FS+++G G+R +SG
Sbjct: 6 LSLNESELELALGRAIGPHIDAADLFLQETQEESWILDDGIVKEGAFSLDRGFGLRVMSG 65
Query: 333 DKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINI 392
+KT F Y+D I + ++ A +S RSI G ++K +I LY + +
Sbjct: 66 EKTGFAYADQIELSAMLEAAQSARSIVK--GGGSVLVKTGGEIISRRLYPAVNPLLLTQD 123
Query: 393 REKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIV 452
K+ L+ ++ AR D RV +V+ +LSG YD IL+ + G + D+RPLV V+++V
Sbjct: 124 VNKVAFLKSLDIYARKIDVRVKQVMLSLSGAYDSILVFNSYGQLAKDVRPLVHFSVSVVV 183
Query: 453 EKNGRREIGNSGCGGRYNYNYFTDM-ILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPG 511
E +GR E SGCGGR +Y + E+CV+ +V AL NL A APAG VVLGPG
Sbjct: 184 EDHGRFEKARSGCGGRGDYTIVMNKETAERCVARAVRQALHNLSAISAPAGTFPVVLGPG 243
Query: 512 WPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEG 571
WP +L HEA+GHGLEGDFNRK +S FS IG+++AS+ T+VD+GT+ NRRGS+++DDEG
Sbjct: 244 WPAVLFHEAVGHGLEGDFNRKKTSVFSGKIGEKVASELCTVVDDGTIPNRRGSLSVDDEG 303
Query: 572 NPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHP 631
P+Q T LIE GILK Y+QD +NARLMNM TGN RRES+A +P+PRMTNTY+L G P
Sbjct: 304 TPSQQTVLIEKGILKNYLQDTLNARLMNMKPTGNGRRESYASLPLPRMTNTYLLPGISAP 363
Query: 632 EEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNIL 691
EEII+SV+ G+Y +FSGGQVDIT+GKFVF+AS+AY+I++GK+ P+KGATLIG G +L
Sbjct: 364 EEIIASVEKGIYCADFSGGQVDITSGKFVFTASEAYLIEHGKLGKPIKGATLIGSGHEVL 423
Query: 692 KKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDS 730
KK+SM+GND++LD G+G CGK GQ VPVGVGQPTLKID+
Sbjct: 424 KKISMVGNDLQLDSGIGSCGKAGQTVPVGVGQPTLKIDA 462
>gi|388601491|ref|ZP_10159887.1| hypothetical protein VcamD_16539 [Vibrio campbellii DS40M4]
Length = 481
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 256/482 (53%), Positives = 346/482 (71%), Gaps = 9/482 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N LL P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 INQIEQALLAPNGLTEQDIADTLASIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSL 380
+ GVGVRA++G+KT F YSD I + L + + R IA Q NGK+ K +
Sbjct: 63 DCGVGVRAVTGEKTGFAYSDQIQLDGLKQSAIAARGIAQQGQNGKVHAFKRSDN---QAY 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y + ++S ++K +LL ++ R K+P + +V ++SG ++ +L+ DG DI
Sbjct: 120 YDAVNPLASWEKQQKTELLLSLDAYIRTKEPTIKEVSISISGVHEQMLVAATDGTYAGDI 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF---TDMILE--KCVSNSVNSALINLE 495
RPLV+L ++++ EK RRE G++G GGR+ Y++F TD + + + ++ AL+NLE
Sbjct: 180 RPLVRLSISVLAEKGDRRERGSAGGGGRFGYDFFLSETDGVKQAFQFADEAIRMALVNLE 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A+ APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS FS +G+++ S TIVD+
Sbjct: 240 AEAAPAGMMPVVLGSGWPGVLLHEAVGHGLEGDFNRKESSVFSGKMGEQVTSPLCTIVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTL + RGS+N+DDEG Q TLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTLKDLRGSLNVDDEGVNGQYNTLIENGVLKGYMQDKLNARLMGVNPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G+ PEEIIS+VK GLYA NF GGQVDIT+GKFVFSAS+AY+I++GKIT
Sbjct: 360 MPRMTNTYMLPGEHTPEEIISTVKKGLYAPNFGGGQVDITSGKFVFSASEAYLIEDGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G +++VSM+GND+ +D GVGVCGK GQ VPVGVGQPTLK+DSITVGG
Sbjct: 420 RPVKGATLIGSGIEAMQQVSMVGNDLSIDRGVGVCGKAGQSVPVGVGQPTLKLDSITVGG 479
Query: 736 TN 737
T
Sbjct: 480 TE 481
>gi|407782481|ref|ZP_11129693.1| TldD protein [Oceanibaculum indicum P24]
gi|407205846|gb|EKE75812.1| TldD protein [Oceanibaculum indicum P24]
Length = 479
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 238/466 (51%), Positives = 329/466 (70%), Gaps = 8/466 (1%)
Query: 275 LDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDK 334
LD + +++G D + Y +++++E+ ++G +K +F QG G+R++ GD
Sbjct: 17 LDRSRIERLVGEALSG-ADDGELYLEYSQSESLGFDDGRLKAASFDTAQGFGLRSVIGDA 75
Query: 335 TAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKIN-SLYSFTDTISSINIR 393
+ ++ D+S+ + AV + +++ G + I N LY+ + +S++
Sbjct: 76 AGYAHAADLSEEAIRRAVTTVQAVKAGHGGTLAE----GPIGTNRQLYTDANPLSAVPFE 131
Query: 394 EKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVE 453
K+KLL+ ++ AR KDPRV +V A+++G + + I R DG+ VADIRPLV+L V I+V
Sbjct: 132 TKVKLLQDIDAYARAKDPRVRQVSASVAGSWKAVQIIRPDGMRVADIRPLVRLNVQIVVA 191
Query: 454 KNGRREIGNSGCGGRYNYNYFTD-MILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGW 512
+ R E G+SG GGR Y+ + D + V ++ A++NL + PAPAG M+VVLGPGW
Sbjct: 192 EGDRMESGSSGAGGRTGYDLYLDPRTWQAQVDEALRQAVVNLGSIPAPAGEMEVVLGPGW 251
Query: 513 PGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGN 572
PG++LHEA+GHGLEGDFNRK +SAFS IG+++ASK +T+VD+GT+ +RRGS+ +DDEG
Sbjct: 252 PGVMLHEAVGHGLEGDFNRKQTSAFSGKIGQQVASKGVTVVDDGTMEDRRGSLTVDDEGT 311
Query: 573 PTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPE 632
P+Q T LIE+GIL GYMQD NARLM M TGN RR+SFAH P+PRMTNT ML G+ P+
Sbjct: 312 PSQRTVLIEDGILVGYMQDRQNARLMGMKPTGNGRRQSFAHHPMPRMTNTLMLGGQHDPQ 371
Query: 633 EIISSVKN-GLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNIL 691
EII+SVK GLYA NF GGQVDIT+GKFVFSAS+AY+I++GKI VKGATLIG+GP +
Sbjct: 372 EIIASVKGRGLYAVNFGGGQVDITSGKFVFSASEAYLIEDGKIGPAVKGATLIGNGPKAM 431
Query: 692 KKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
+VSMIGND+KLD G+G CGKDGQ VPVGVGQPT+K+ ITVGGT
Sbjct: 432 TQVSMIGNDLKLDDGIGTCGKDGQGVPVGVGQPTVKMRGITVGGTQ 477
>gi|42520810|ref|NP_966725.1| tldD protein [Wolbachia endosymbiont of Drosophila melanogaster]
gi|42410550|gb|AAS14659.1| tldD protein [Wolbachia endosymbiont of Drosophila melanogaster]
Length = 472
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 259/461 (56%), Positives = 337/461 (73%), Gaps = 13/461 (2%)
Query: 280 LLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFY 339
+ KI+ N N D + + +F ++E+ + E+ I+K + + +G G+R+ D T+F
Sbjct: 19 VYKIVNNALSNS-DGGELFLEFCQSESLVFEDNILKHMDLNTRRGFGLRSFCEDSTSFVC 77
Query: 340 SDDISKNTLINA---VKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKI 396
S +IS+ + NA VKS+ S+ N++N I + + K SLYS + I+ +++ KI
Sbjct: 78 SSEISEKEISNAASMVKSSVSL-NKTN-SINLNEETK-----SLYSRINPINEMDLNSKI 130
Query: 397 KLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNG 456
KLL V + R K+ V +V LSGE+ V+ I + D + +DIRPLV+ V +IVEK+G
Sbjct: 131 KLLNEVNEYVRSKNNCVKQVKITLSGEWQVVQIIKGDHRL-SDIRPLVRFNVLVIVEKDG 189
Query: 457 RREIGNSGCGGRYNYNYFTDMILEKCVSN-SVNSALINLEAKPAPAGIMKVVLGPGWPGI 515
R E G++G GGR +Y+ F K V+N ++ AL+NLEA P PAG M VVLGPGWPGI
Sbjct: 190 RTERGSAGHGGRDSYSKFISEKKWKEVANQALEQALVNLEAIPTPAGEMTVVLGPGWPGI 249
Query: 516 LLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQ 575
LLHEA+GHGLEGDFNRK SAFSN +GK++A+ +IT+VD+GTL N RGSI++DDEG P
Sbjct: 250 LLHEAVGHGLEGDFNRKKVSAFSNSVGKQVAASDITVVDDGTLPNLRGSISVDDEGTPPS 309
Query: 576 CTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEII 635
LIE+GILKGYMQD MNA+LM +S TGN RRES+ + +PRMTNTYML GK+ P+EII
Sbjct: 310 YNILIEDGILKGYMQDHMNAKLMGVSPTGNGRRESYKEVIMPRMTNTYMLPGKYTPKEII 369
Query: 636 SSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVS 695
SSVK GLYA NF GGQVDIT+GKFVFS+S+AY+I+NGKIT PVKGATLIG GP +LKKVS
Sbjct: 370 SSVKKGLYAVNFGGGQVDITSGKFVFSSSEAYLIENGKITQPVKGATLIGDGPTVLKKVS 429
Query: 696 MIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
M+GND+KLDPGVG C KDGQ VPVGVGQPTLK+D+ITVGGT
Sbjct: 430 MVGNDLKLDPGVGTCSKDGQNVPVGVGQPTLKVDAITVGGT 470
>gi|416053066|ref|ZP_11578677.1| peptidase U62 modulator of DNA gyrase [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
gi|347991366|gb|EGY32842.1| peptidase U62 modulator of DNA gyrase [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
Length = 482
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 244/463 (52%), Positives = 332/463 (71%), Gaps = 5/463 (1%)
Query: 280 LLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFY 339
L + + + VDY D YFQ +++ENW+LE+ I+K G F I++GVGVRA+SG+KT F Y
Sbjct: 20 LPNVFDTLAQRNVDYVDLYFQLSQDENWVLEDEIIKEGGFHIDRGVGVRAVSGEKTGFAY 79
Query: 340 SDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLL 399
SD I+ L ++ R IA S + + Y + + S++ +KI+LL
Sbjct: 80 SDQINLANLQQCAQAVRGIAQPSQCNFILPVKFNPVDAPLRYQPINPLHSLSQEQKIELL 139
Query: 400 ERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRRE 459
V+K AR+ DPRV++V A LS Y+ +L+ DG + ADIRPL++L V+++VE++G+RE
Sbjct: 140 HLVDKTARVADPRVVQVNAGLSMVYEEMLVAATDGTLAADIRPLIRLSVSVLVEQDGKRE 199
Query: 460 IGNSGCGGRYNYNYFTDMI--LEKCV---SNSVNSALINLEAKPAPAGIMKVVLGPGWPG 514
G +G GGR+ ++F + ++ V +V AL+NL A APAG+M VVLG GWPG
Sbjct: 200 RGGAGAGGRFALDWFFENYNGEQRAVYFAKEAVRQALVNLSAMAAPAGLMPVVLGAGWPG 259
Query: 515 ILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPT 574
+LLHEA+GHGLEGDFNRK SS FS IG+ + S TIVD+GTL +RRGS+ +DDEG P+
Sbjct: 260 VLLHEAVGHGLEGDFNRKESSLFSGKIGELVTSPLCTIVDDGTLMDRRGSVTVDDEGVPS 319
Query: 575 QCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEI 634
Q LI++GIL+ YMQD MNARLM + TGN RRES+AH+P+PRMTNTYML GK E++
Sbjct: 320 QHNVLIKDGILQKYMQDKMNARLMGVQPTGNGRRESYAHLPMPRMTNTYMLAGKDKFEDL 379
Query: 635 ISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKV 694
++SV++G++A +F GGQVDIT+GKFVFS S+AY+I+ GKIT PVKGATLIG G +++ V
Sbjct: 380 VASVEHGIFAPHFGGGQVDITSGKFVFSTSEAYLIEKGKITKPVKGATLIGSGIEVMQNV 439
Query: 695 SMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
SM+ ++++LD GVG CGK+GQ VPVGVGQP LKID ITVGGTN
Sbjct: 440 SMVADEVELDHGVGTCGKEGQSVPVGVGQPALKIDQITVGGTN 482
>gi|254507375|ref|ZP_05119510.1| TldD protein [Vibrio parahaemolyticus 16]
gi|219549631|gb|EED26621.1| TldD protein [Vibrio parahaemolyticus 16]
Length = 481
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 251/482 (52%), Positives = 343/482 (71%), Gaps = 9/482 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N LL L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 INHVEDALLGAAGLTEQDVADTLASIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSL 380
+ GVGVRA++G+KT F YSD I + L + + R IA Q NG+++ K ++
Sbjct: 63 DCGVGVRAVTGEKTGFAYSDQIQLDGLKQSAIAARGIAQQGQNGQVQAFKRTDN---QTV 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y + + S +K KLL+ ++ R K+P + +V +LSG ++ +L+ DG D+
Sbjct: 120 YGAVNPLESWQKEQKTKLLKELDAYIRTKEPLIKEVSISLSGVHEQMLVAATDGTYAGDV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLE 495
RPLV+L ++++ ++ RRE G+SG GGR+ Y++F + + ++ AL+NLE
Sbjct: 180 RPLVRLSISVLAQRGERRERGSSGGGGRFGYDFFLSESQGSQVAYQFADEAIRMALVNLE 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A+ APAG M VVLG GWPG+LLHEA+GHGLEGDFNRK SS FS +GK++ S+ TIVD+
Sbjct: 240 AEAAPAGAMPVVLGSGWPGVLLHEAVGHGLEGDFNRKESSVFSGKVGKKVTSELCTIVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTL + RGS+N+DDEG Q TLIENG+LKGY+QD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTLKDLRGSLNVDDEGVAGQYNTLIENGVLKGYIQDKLNARLMGVNPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G+ PEEIIS+VK GLYA NF GGQVDIT+GKFVFSAS+AY+I++GKIT
Sbjct: 360 MPRMTNTYMLPGQHTPEEIISTVKKGLYAPNFGGGQVDITSGKFVFSASEAYLIEDGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G +++VSM+GND+ +D GVGVCGK GQ VPVGVGQPTLK+DS+TVGG
Sbjct: 420 RPVKGATLIGSGIEAMQQVSMVGNDLSIDRGVGVCGKAGQSVPVGVGQPTLKLDSLTVGG 479
Query: 736 TN 737
T
Sbjct: 480 TE 481
>gi|209544189|ref|YP_002276418.1| peptidase U62 modulator of DNA gyrase [Gluconacetobacter
diazotrophicus PAl 5]
gi|209531866|gb|ACI51803.1| peptidase U62 modulator of DNA gyrase [Gluconacetobacter
diazotrophicus PAl 5]
Length = 486
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 226/447 (50%), Positives = 318/447 (71%), Gaps = 4/447 (0%)
Query: 292 VDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINA 351
+D + + ++ ++E L++G++++ F + G G+RAI G++T F ++D++S++ L A
Sbjct: 42 MDDGELFLEYRESEMISLDDGVIRSATFDTSSGFGLRAILGEETGFAHADELSESALKRA 101
Query: 352 VKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDP 411
+ + +G + + LY T+ + + + LL ++ AR +D
Sbjct: 102 ADTVTQVRAGRSGTMAAAPHATN---RHLYGDTNPLGETDFASRAALLSALDAYARGRDS 158
Query: 412 RVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNY 471
RV++V A+L+ E+ + I R DG VAD+RPLV+L V+++VEK+GRRE G G GGRY+Y
Sbjct: 159 RVVQVSASLAAEWQAVQIIRADGARVADLRPLVRLNVSVVVEKDGRRESGGHGLGGRYSY 218
Query: 472 NYFTD-MILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFN 530
D + + V ++ AL+NL+A PAPAG M+VVLG GWPGILLHEA+GHGLEGDFN
Sbjct: 219 TRLLDEAVWKGAVDEALRMALVNLDAVPAPAGEMEVVLGAGWPGILLHEAVGHGLEGDFN 278
Query: 531 RKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQ 590
RKG+SAF+ +G+R+A+ +T+VD+GTL +RRGS+ IDDEG P+ T +IE+GIL GY+Q
Sbjct: 279 RKGTSAFAGLMGQRVAAPGVTVVDDGTLPDRRGSLTIDDEGTPSGRTVMIEDGILTGYIQ 338
Query: 591 DIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGG 650
D MNARLM + TGN RR+S+AH P+PRMTNT ML G E++I S + GLYA NF GG
Sbjct: 339 DRMNARLMGVRPTGNGRRQSYAHAPLPRMTNTIMLGGDASTEDMIRSTRRGLYAVNFGGG 398
Query: 651 QVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVC 710
QVDIT+GKFVF+AS+AY+I++GKIT PV+GATLIG+G + + +VSMIG DM LDPG+G C
Sbjct: 399 QVDITSGKFVFAASEAYLIEDGKITAPVRGATLIGNGADAMTRVSMIGGDMALDPGIGTC 458
Query: 711 GKDGQMVPVGVGQPTLKIDSITVGGTN 737
GK GQ VPVGVGQPTLK+ +TVGGT
Sbjct: 459 GKSGQGVPVGVGQPTLKMTGLTVGGTG 485
>gi|153835811|ref|ZP_01988478.1| TldD protein [Vibrio harveyi HY01]
gi|148867437|gb|EDL66833.1| TldD protein [Vibrio harveyi HY01]
Length = 481
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 256/482 (53%), Positives = 346/482 (71%), Gaps = 9/482 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N LL P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 INQIEQALLAPNGLTEQDIADTLASIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSL 380
+ GVGVRA++G+KT F YSD I + L + + R IA Q NGK+ K +
Sbjct: 63 DCGVGVRAVTGEKTGFAYSDQIQLDGLKQSAIAARGIAQQGQNGKVHAFKRSDN---QAY 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y + ++S ++K +LL ++ R K+P + +V ++SG ++ +L+ DG DI
Sbjct: 120 YDAVNPLASWEKQQKTELLLSLDAYIRTKEPLIKEVSISISGVHEQMLVAATDGTYAGDI 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF---TDMILE--KCVSNSVNSALINLE 495
RPLV+L ++++ EK RRE G++G GGR+ Y++F TD + + + ++ AL+NLE
Sbjct: 180 RPLVRLSISVLAEKGDRRERGSAGGGGRFGYDFFLSETDGVKQAFQFADEAIRMALVNLE 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A+ APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS FS +G+++ S TIVD+
Sbjct: 240 AEAAPAGMMPVVLGSGWPGVLLHEAVGHGLEGDFNRKESSVFSGKMGEQVTSPLCTIVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTL + RGS+N+DDEG Q TLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTLKDLRGSLNVDDEGVNGQYNTLIENGVLKGYMQDKLNARLMGVNPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G+ PEEIIS+VK GLYA NF GGQVDIT+GKFVFSAS+AY+I++GKIT
Sbjct: 360 MPRMTNTYMLPGEHTPEEIISTVKKGLYAPNFGGGQVDITSGKFVFSASEAYLIEDGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G +++VSM+GND+ +D GVGVCGK GQ VPVGVGQPTLK+DSITVGG
Sbjct: 420 RPVKGATLIGSGIEAMQQVSMVGNDLSIDRGVGVCGKAGQSVPVGVGQPTLKLDSITVGG 479
Query: 736 TN 737
T
Sbjct: 480 TE 481
>gi|162147131|ref|YP_001601592.1| peptidase, modulator of DNA gyrase [Gluconacetobacter
diazotrophicus PAl 5]
gi|161785708|emb|CAP55279.1| Peptidase protein, modulator of DNA gyrase [Gluconacetobacter
diazotrophicus PAl 5]
Length = 504
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 227/447 (50%), Positives = 318/447 (71%), Gaps = 4/447 (0%)
Query: 292 VDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINA 351
+D + + ++ ++E L++G++++ F + G G+RAI G++T F ++D++S++ L A
Sbjct: 60 MDDGELFLEYRESEMISLDDGVIRSATFDTSSGFGLRAILGEETGFAHADELSESALKRA 119
Query: 352 VKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDP 411
+ + +G + + LY T+ + + + LL ++ AR +D
Sbjct: 120 ADTVTQVRAGRSGTMAAAPHATN---RHLYGDTNPLGETDFASRAALLSALDAYARGRDS 176
Query: 412 RVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNY 471
RV++V A+L+ E+ + I R DG VAD+RPLV+L V+++VEK+GRRE G G GGRY+Y
Sbjct: 177 RVVQVSASLAAEWQAVQIIRADGARVADLRPLVRLNVSVVVEKDGRRESGGHGLGGRYSY 236
Query: 472 NYFTD-MILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFN 530
D + + V ++ AL+NL+A PAPAG M+VVLG GWPGILLHEA+GHGLEGDFN
Sbjct: 237 TRLLDEAVWKGAVDEALRMALVNLDAVPAPAGEMEVVLGAGWPGILLHEAVGHGLEGDFN 296
Query: 531 RKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQ 590
RKG+SAF+ +G+R+A+ +T+VD+GTL +RRGS+ IDDEG P+ T +IE+GIL GY+Q
Sbjct: 297 RKGTSAFAGLMGQRVAAPGVTVVDDGTLPDRRGSLTIDDEGTPSGRTVMIEDGILTGYIQ 356
Query: 591 DIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGG 650
D MNARLM + TGN RR+S+AH P+PRMTNT ML G E++I S + GLYA NF GG
Sbjct: 357 DRMNARLMGVRPTGNGRRQSYAHAPLPRMTNTIMLGGDASTEDMIRSTRRGLYAVNFGGG 416
Query: 651 QVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVC 710
QVDIT+GKFVF+AS+AY+I++GKIT PV+GATLIG+G + + +VSMIG DM LDPGVG C
Sbjct: 417 QVDITSGKFVFAASEAYLIEDGKITAPVRGATLIGNGADAMTRVSMIGGDMALDPGVGTC 476
Query: 711 GKDGQMVPVGVGQPTLKIDSITVGGTN 737
GK GQ VPVGVGQPTLK+ +TVGGT
Sbjct: 477 GKSGQGVPVGVGQPTLKMTGLTVGGTG 503
>gi|148554837|ref|YP_001262419.1| C69 family peptidase [Sphingomonas wittichii RW1]
gi|148500027|gb|ABQ68281.1| peptidase U62, modulator of DNA gyrase [Sphingomonas wittichii RW1]
Length = 476
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 235/464 (50%), Positives = 327/464 (70%), Gaps = 8/464 (1%)
Query: 275 LDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDK 334
LD L++ + D + Y Q+ +E++ ++G +KT +++ G G+R +SG+
Sbjct: 17 LDPDAALRLTAQTLQG-CDDGELYLQYLSSESFGFDDGRLKTADYNTQAGFGLRGVSGET 75
Query: 335 TAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINS-LYSFTDTISSINIR 393
TAF +++++S++ +I A T S+ + + G + + NS LY+ D + I
Sbjct: 76 TAFAHANELSESAIIRA-GETMSLLDPAAGS----RAAPPRRTNSRLYTADDPLGLIPFA 130
Query: 394 EKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVE 453
K++L ++++ AR +DPRV +V LSG + V+ I R DG D+RPLV+L V+++VE
Sbjct: 131 RKVELCQQIDAAARARDPRVQQVSVGLSGSWSVVEIVRPDGFTAFDVRPLVRLNVSVVVE 190
Query: 454 KNGRREIGNSGCGGRYNYN-YFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGW 512
+NGRRE G G GGRY Y+ F + + +++ A++NL+A APAG M VV GPGW
Sbjct: 191 QNGRRETGFFGMGGRYLYDRLFEPAQWNRAIDEALHQAIVNLDAVAAPAGEMTVVCGPGW 250
Query: 513 PGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGN 572
PG+LLHEAIGHGLEGDFNRKG+SAFS IG+R+A+ +T+VD+G++A+RRGS+ IDDEG
Sbjct: 251 PGVLLHEAIGHGLEGDFNRKGTSAFSGRIGERVAAPGVTVVDDGSIADRRGSLTIDDEGT 310
Query: 573 PTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPE 632
PTQC LIE+GILKGY+ D +NARLM + TGN RRES+AH P+PRMTNT+M G PE
Sbjct: 311 PTQCNVLIEDGILKGYIHDRLNARLMGVDPTGNGRRESYAHAPMPRMTNTFMYGGNDDPE 370
Query: 633 EIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILK 692
EII+ NG+YA +F GGQVDIT+GKFVFS ++AY I+NGK+T P+KGATLIG GP++L
Sbjct: 371 EIIARAGNGIYAKSFGGGQVDITSGKFVFSCTEAYRIENGKLTVPIKGATLIGDGPSVLT 430
Query: 693 KVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
KV+ IGNDM LD GVG+CGK GQ VP GVGQPT+ I ++TVGGT
Sbjct: 431 KVTAIGNDMALDEGVGICGKGGQSVPAGVGQPTVMISALTVGGT 474
>gi|350532525|ref|ZP_08911466.1| hypothetical protein VrotD_15437 [Vibrio rotiferianus DAT722]
Length = 481
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 256/482 (53%), Positives = 345/482 (71%), Gaps = 9/482 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N LL P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 INQIEQALLAPNGLTEQDIADTLASIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSL 380
+ GVGVRA++G+KT F YSD I L + + R IA Q NGK+ K +
Sbjct: 63 DCGVGVRAVTGEKTGFAYSDQIQLEGLKQSAIAARGIAQQGQNGKVHAFKRSDN---QAY 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y + ++S ++K +LL ++ R K+P + +V ++SG ++ +L+ DG DI
Sbjct: 120 YDAVNPLASWEKQQKTELLLSLDAYIRTKEPMIKEVSISISGVHEQMLVAATDGTYAGDI 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF---TDMILE--KCVSNSVNSALINLE 495
RPLV+L ++++ EK RRE G++G GGR+ Y++F TD + + + ++ AL+NLE
Sbjct: 180 RPLVRLSISVLAEKGDRRERGSAGGGGRFGYDFFLSETDGVKQAFQFADEAIRMALVNLE 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A+ APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS FS +G+++ S TIVD+
Sbjct: 240 AEAAPAGMMPVVLGSGWPGVLLHEAVGHGLEGDFNRKESSVFSGKMGEQVTSPLCTIVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTL + RGS+N+DDEG Q TLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTLKDLRGSLNVDDEGVNGQYNTLIENGVLKGYMQDKLNARLMGVNPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G+ PEEIIS+VK GLYA NF GGQVDIT+GKFVFSAS+AY+I++GKIT
Sbjct: 360 MPRMTNTYMLPGEHTPEEIISTVKKGLYAPNFGGGQVDITSGKFVFSASEAYLIEDGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G +++VSM+GND+ +D GVGVCGK GQ VPVGVGQPTLK+DSITVGG
Sbjct: 420 RPVKGATLIGSGIEAMQQVSMVGNDLSIDRGVGVCGKAGQSVPVGVGQPTLKLDSITVGG 479
Query: 736 TN 737
T
Sbjct: 480 TE 481
>gi|225631172|ref|ZP_03787876.1| TldD protein [Wolbachia endosymbiont of Muscidifurax uniraptor]
gi|225591129|gb|EEH12307.1| TldD protein [Wolbachia endosymbiont of Muscidifurax uniraptor]
Length = 472
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 259/461 (56%), Positives = 337/461 (73%), Gaps = 13/461 (2%)
Query: 280 LLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFY 339
+ KI+ N N D + + +F ++E+ + E+ I+K + + +G G+R+ D T+F
Sbjct: 19 VYKIVNNALSNS-DGGELFLEFCQSESLVFEDNILKHMDLNTRRGFGLRSFCVDSTSFVC 77
Query: 340 SDDISKNTLINA---VKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKI 396
S +IS+ + NA VKS+ S+ N++N I + + K SLYS + I+ +++ KI
Sbjct: 78 SSEISEKEISNAASMVKSSVSL-NKTN-SINLNEETK-----SLYSRINPINEMDLNSKI 130
Query: 397 KLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNG 456
KLL V + R K+ V +V LSGE+ V+ I + D + +DIRPLV+ V +IVEK+G
Sbjct: 131 KLLNEVNEYVRSKNNCVKQVKITLSGEWQVVQIIKGDHRL-SDIRPLVRFNVLVIVEKDG 189
Query: 457 RREIGNSGCGGRYNYNYFTDMILEKCVSN-SVNSALINLEAKPAPAGIMKVVLGPGWPGI 515
R E G++G GGR +Y+ F K V+N ++ AL+NLEA P PAG M VVLGPGWPGI
Sbjct: 190 RTERGSAGHGGRDSYSKFISEKKWKEVANQALEQALVNLEAIPTPAGEMTVVLGPGWPGI 249
Query: 516 LLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQ 575
LLHEA+GHGLEGDFNRK SAFSN +GK++A+ +IT+VD+GTL N RGSI++DDEG P
Sbjct: 250 LLHEAVGHGLEGDFNRKKVSAFSNSVGKQVAASDITVVDDGTLPNLRGSISVDDEGTPPS 309
Query: 576 CTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEII 635
LIE+GILKGYMQD MNA+LM +S TGN RRES+ + +PRMTNTYML GK+ P+EII
Sbjct: 310 YNILIEDGILKGYMQDHMNAKLMGVSPTGNGRRESYKEVIMPRMTNTYMLPGKYTPKEII 369
Query: 636 SSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVS 695
SSVK GLYA NF GGQVDIT+GKFVFS+S+AY+I+NGKIT PVKGATLIG GP +LKKVS
Sbjct: 370 SSVKKGLYAVNFGGGQVDITSGKFVFSSSEAYLIENGKITQPVKGATLIGDGPTVLKKVS 429
Query: 696 MIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
M+GND+KLDPGVG C KDGQ VPVGVGQPTLK+D+ITVGGT
Sbjct: 430 MVGNDLKLDPGVGTCSKDGQNVPVGVGQPTLKVDAITVGGT 470
>gi|332288470|ref|YP_004419322.1| protease TldD [Gallibacterium anatis UMN179]
gi|330431366|gb|AEC16425.1| protease TldD [Gallibacterium anatis UMN179]
Length = 486
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 245/476 (51%), Positives = 327/476 (68%), Gaps = 7/476 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L L I ++D+AD +FQ + +E W LE+GI+K G F I+QGVGVR
Sbjct: 11 LLTPNQLSIAQLPTIFDIFSDRQIDFADLFFQTSMDEVWTLEDGIIKEGGFHIDQGVGVR 70
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSL--YSFTDT 386
AIS +KT F YSD I+ N L N + + IA + I ++ + Y+ +
Sbjct: 71 AISAEKTGFAYSDVINLNALHNCASAAKGIAQHKSPVTAIFPQQGFNAVDPILRYAAINP 130
Query: 387 ISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQL 446
+ +++ +KI LL V+ AR +DPR+ +V LS Y+ +LI DG + ADIRPL++L
Sbjct: 131 LDTLSREQKIALLHLVDNSARAEDPRITRVSVTLSTLYEEVLIAATDGTLAADIRPLIRL 190
Query: 447 FVTIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEK----CVSNSVNSALINLEAKPAPA 501
++++ E++GRRE G++G GGR +F D E+ +V AL+NL A APA
Sbjct: 191 SISVLAEQDGRRERGSAGVGGRRALTWFFEDYQGEQRAVYFAKQAVRQALVNLNAIAAPA 250
Query: 502 GIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANR 561
G+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS FS IG+ + S TIVD+GTL +R
Sbjct: 251 GMMPVVLGAGWPGVLLHEAVGHGLEGDFNRKKSSLFSGKIGELVTSPLCTIVDDGTLPDR 310
Query: 562 RGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTN 621
RGS+ IDDEG P Q LI++G+L+GYMQD +NA LM M TGNARRES+AH+P+PRMTN
Sbjct: 311 RGSLTIDDEGVPGQYNVLIKDGVLQGYMQDKLNAHLMGMKPTGNARRESYAHLPMPRMTN 370
Query: 622 TYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGA 681
TYML G+ +++I SV G+YA +F GGQVDIT+GKFVFS S+AY+I+ GKIT P+KGA
Sbjct: 371 TYMLPGEHQFDDLIQSVDYGVYAPHFGGGQVDITSGKFVFSTSEAYLIEKGKITKPIKGA 430
Query: 682 TLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
TLIG G +++ VSM+ N++++D G+GVCGK GQ VPVGVGQP LKI+ ITVGGTN
Sbjct: 431 TLIGSGIEVMQNVSMVANELEIDHGIGVCGKQGQSVPVGVGQPALKIEKITVGGTN 486
>gi|417321465|ref|ZP_12108003.1| TldD protein [Vibrio parahaemolyticus 10329]
gi|328471405|gb|EGF42300.1| TldD protein [Vibrio parahaemolyticus 10329]
Length = 481
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 253/481 (52%), Positives = 345/481 (71%), Gaps = 9/481 (1%)
Query: 263 NIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSIN 322
N LL P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I+
Sbjct: 4 NQIEQALLAPNGLTEQDIADTLASIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNID 63
Query: 323 QGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSLY 381
GVGVRA++G+KT F YSD I+ L + + R IA Q NGK++ K + + Y
Sbjct: 64 CGVGVRAVTGEKTGFAYSDQINPEGLKQSAIAARGIAQQGQNGKVQAFKRSEN---QAYY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ ++S ++K +LL ++ R K+P + +V ++SG ++ +L+ DG D R
Sbjct: 121 DAVNPLASWEKQQKTELLMSLDAYIRTKEPLIKEVSISISGVHEQMLVAATDGTFAGDTR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF---TDMILEKC--VSNSVNSALINLEA 496
PLV+L ++++ +K RRE G++G GGR+ Y++F TD + + ++ AL+NLEA
Sbjct: 181 PLVRLSISVLAQKGDRRERGSAGGGGRFGYDFFLSETDGVKQAFHFADEAIRMALVNLEA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
+ APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS FS +G+++ S TIVD+G
Sbjct: 241 EAAPAGMMPVVLGSGWPGVLLHEAVGHGLEGDFNRKESSVFSGKMGQQVTSSLCTIVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL + RGS+N+DDEG Q TLIENGILKGYMQD +NARLM +S TGN RRES+AH+P+
Sbjct: 301 TLKDLRGSLNVDDEGVNGQYNTLIENGILKGYMQDKLNARLMGVSPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ PEEIIS+VK G+YA NF GGQVDIT+GKFVFSAS+AY+I++GK+T
Sbjct: 361 PRMTNTYMLPGEHTPEEIISTVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIEDGKVTR 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G +++VSM+GND+ +D GVGVCGK GQ VPVGVGQPTLK+DS+TVGGT
Sbjct: 421 PVKGATLIGSGIEAMQQVSMVGNDLSIDKGVGVCGKAGQSVPVGVGQPTLKLDSLTVGGT 480
Query: 737 N 737
Sbjct: 481 E 481
>gi|433658754|ref|YP_007276133.1| TldD protein [Vibrio parahaemolyticus BB22OP]
gi|432509442|gb|AGB10959.1| TldD protein [Vibrio parahaemolyticus BB22OP]
Length = 481
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 252/481 (52%), Positives = 345/481 (71%), Gaps = 9/481 (1%)
Query: 263 NIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSIN 322
N LL P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I+
Sbjct: 4 NQIEQALLAPNGLTEQDIADTLASIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNID 63
Query: 323 QGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSLY 381
GVGVRA++G+KT F YSD I+ L + + R IA Q NGK++ K + + Y
Sbjct: 64 CGVGVRAVTGEKTGFAYSDQINPEGLKQSAIAARGIAQQGQNGKVQAFKRSEN---QAYY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ ++S ++K +LL ++ R K+P + +V ++SG ++ +L+ DG D R
Sbjct: 121 DAVNPLASWEKQQKTELLMSLDAYIRTKEPLIKEVSISISGVHEQMLVAATDGTFAGDTR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF---TDMILEKC--VSNSVNSALINLEA 496
PLV+L ++++ +K RRE G++G GGR+ Y++F TD + + ++ AL+NLEA
Sbjct: 181 PLVRLSISVLAQKGDRRERGSAGGGGRFGYDFFLSETDGVKQAFHFADEAIRMALVNLEA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
+ APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS FS +G+++ S TIVD+G
Sbjct: 241 EAAPAGMMPVVLGSGWPGVLLHEAVGHGLEGDFNRKESSVFSGKMGQQVTSSLCTIVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL + RGS+N+DDEG Q TLIENG+LKGYMQD +NARLM +S TGN RRES+AH+P+
Sbjct: 301 TLKDLRGSLNVDDEGVNGQYNTLIENGVLKGYMQDKLNARLMGVSPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ PEEIIS+VK G+YA NF GGQVDIT+GKFVFSAS+AY+I++GK+T
Sbjct: 361 PRMTNTYMLPGEHTPEEIISTVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIEDGKVTR 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G +++VSM+GND+ +D GVGVCGK GQ VPVGVGQPTLK+DS+TVGGT
Sbjct: 421 PVKGATLIGSGIEAMQQVSMVGNDLSIDKGVGVCGKAGQSVPVGVGQPTLKLDSLTVGGT 480
Query: 737 N 737
Sbjct: 481 E 481
>gi|91225599|ref|ZP_01260673.1| TldD protein [Vibrio alginolyticus 12G01]
gi|91189719|gb|EAS75993.1| TldD protein [Vibrio alginolyticus 12G01]
Length = 481
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 252/480 (52%), Positives = 346/480 (72%), Gaps = 9/480 (1%)
Query: 263 NIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSIN 322
N LL P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I+
Sbjct: 4 NQIEQALLAPNGLTEQDIADTLASIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNID 63
Query: 323 QGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSLY 381
GVGVRA++G+KT F YSD I L + + R IA Q NGK++ K + + Y
Sbjct: 64 CGVGVRAVTGEKTGFAYSDQIQPEGLKQSAMAARGIAQQGQNGKVQAFKRTEN---QAYY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + ++ ++K +LL+ ++ R K+P + +V ++SG ++ +L+ DG DIR
Sbjct: 121 AAVNPLAEWEKQQKTELLKSLDAYIRTKEPLIKEVSISISGVHEQMLVAATDGTYAGDIR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF---TDMILEK--CVSNSVNSALINLEA 496
PLV+L ++++ +K RRE G++G GGR+ Y++F ++ + + ++ ALINLEA
Sbjct: 181 PLVRLSISVLAQKGERRERGSAGGGGRFGYDFFLTESNGVKQAFHYADEAIRMALINLEA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
+ APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS FS +G+++ S TIVD+G
Sbjct: 241 EAAPAGMMPVVLGSGWPGVLLHEAVGHGLEGDFNRKESSVFSGKMGQQVTSSLCTIVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL + RGS+N+DDEG Q TLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+
Sbjct: 301 TLKDLRGSLNVDDEGVNGQYNTLIENGVLKGYMQDKLNARLMGVNPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ PEEIIS+V+ GLYA NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 361 PRMTNTYMLPGEHTPEEIISTVEKGLYAPNFGGGQVDITSGKFVFSASEAYLIENGKITR 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G +++VSM+GND+ +D GVGVCGK GQ VPVGVGQPTLK+DS+TVGGT
Sbjct: 421 PVKGATLIGSGIEAMQQVSMVGNDLSIDKGVGVCGKAGQSVPVGVGQPTLKLDSLTVGGT 480
>gi|225630662|ref|YP_002727453.1| TldD protein [Wolbachia sp. wRi]
gi|225592643|gb|ACN95662.1| TldD protein [Wolbachia sp. wRi]
Length = 472
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 258/461 (55%), Positives = 337/461 (73%), Gaps = 13/461 (2%)
Query: 280 LLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFY 339
+ KI+ N N D + + +F ++E+ + E+ I+K + + +G G+R+ D T+F
Sbjct: 19 VYKIVNNALSNS-DGGELFLEFCQSESLVFEDNILKHMDLNTRRGFGLRSFCEDSTSFVC 77
Query: 340 SDDISKNTLINA---VKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKI 396
S +IS+ + NA VKS+ S+ N++N I + + K SLYS + I+ +++ KI
Sbjct: 78 SSEISEKEISNAASMVKSSVSL-NKTN-SINLNEETK-----SLYSRINPINEMDLNSKI 130
Query: 397 KLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNG 456
KLL V + R K+ V +V LSGE+ V+ I + D + +DIRPLV+ V +IVEK+G
Sbjct: 131 KLLNEVNEYVRSKNNCVKQVKITLSGEWQVVQIIKGDHRL-SDIRPLVRFNVLVIVEKDG 189
Query: 457 RREIGNSGCGGRYNYNYFTDMILEKCVSN-SVNSALINLEAKPAPAGIMKVVLGPGWPGI 515
R E G++G GGR +Y+ F K V+N ++ AL+NLEA P PAG M VVLGPGWPGI
Sbjct: 190 RTERGSAGHGGRDSYSKFISEKKWKEVANQALEQALVNLEAIPTPAGEMTVVLGPGWPGI 249
Query: 516 LLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQ 575
LLHEA+GHGLEGDFNRK SAFSN +GK++A+ +IT+VD+GTL N RGSI++DDEG P
Sbjct: 250 LLHEAVGHGLEGDFNRKKVSAFSNSVGKQVAASDITVVDDGTLPNLRGSISVDDEGTPPS 309
Query: 576 CTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEII 635
LIE+GILKGYMQD MNA+LM +S TGN RR+S+ + +PRMTNTYML GK+ P+EII
Sbjct: 310 YNILIEDGILKGYMQDHMNAKLMGVSPTGNGRRDSYKEVIMPRMTNTYMLPGKYTPKEII 369
Query: 636 SSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVS 695
SSVK GLYA NF GGQVDIT+GKFVFS+S+AY+I+NGKIT PVKGATLIG GP +LKKVS
Sbjct: 370 SSVKKGLYAVNFGGGQVDITSGKFVFSSSEAYLIENGKITQPVKGATLIGDGPTVLKKVS 429
Query: 696 MIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
M+GND+KLDPGVG C KDGQ VPVGVGQPTLK+D+ITVGGT
Sbjct: 430 MVGNDLKLDPGVGTCSKDGQNVPVGVGQPTLKVDAITVGGT 470
>gi|163802912|ref|ZP_02196800.1| TldD protein [Vibrio sp. AND4]
gi|159173319|gb|EDP58145.1| TldD protein [Vibrio sp. AND4]
Length = 481
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 255/482 (52%), Positives = 346/482 (71%), Gaps = 9/482 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N LL P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 INQIEQALLAPNGLTEQDVADTLASIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSL 380
+ GVGVRA++G+KT F YSD I L + + R IA Q NGK++ K +
Sbjct: 63 DCGVGVRAVTGEKTGFAYSDQIQLEGLKQSAIAARGIAQQGQNGKVQAFKRSDN---QAY 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y + ++S ++K +LL ++ R K+P + +V ++SG ++ +L+ DG DI
Sbjct: 120 YDAVNPLASWEKQQKTELLLSLDAYIRTKEPMIKEVSISISGVHEQMLVAATDGTYAGDI 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF---TDMILE--KCVSNSVNSALINLE 495
RPLV+L ++++ EK RRE G++G GGR+ Y++F T+ + + + ++ AL+NLE
Sbjct: 180 RPLVRLSISVLAEKGDRRERGSAGGGGRFGYDFFLSETNGVKQAFQFADEAIRMALVNLE 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A+ APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS FS IG+++ S TIVD+
Sbjct: 240 AEAAPAGMMPVVLGSGWPGVLLHEAVGHGLEGDFNRKESSVFSGKIGEQVTSPLCTIVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTL + RGS+N+DDEG Q TLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTLKDLRGSLNVDDEGVNGQYNTLIENGVLKGYMQDKLNARLMGVNPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G+ PEEIIS+VK GLYA NF GGQVDIT+GKFVFSAS+AY+I++GKIT
Sbjct: 360 MPRMTNTYMLPGEHTPEEIISTVKKGLYAPNFGGGQVDITSGKFVFSASEAYLIEDGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G +++VSM+GND+ +D GVGVCGK GQ +PVGVGQPTLK+DSITVGG
Sbjct: 420 RPVKGATLIGSGIEAMQQVSMVGNDLSIDRGVGVCGKAGQSIPVGVGQPTLKLDSITVGG 479
Query: 736 TN 737
T
Sbjct: 480 TE 481
>gi|384227258|ref|YP_005619008.1| TldD protein [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)]
gi|311086134|gb|ADP66216.1| TldD protein [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)]
Length = 483
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 241/476 (50%), Positives = 336/476 (70%), Gaps = 11/476 (2%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL ++++ + L + ++DY D YFQ +E+WILE I+K GN+ + G+GVR
Sbjct: 10 LLNANKINDQDVFIALEELCTRQLDYGDLYFQSHIHESWILENSIIKEGNYHSDAGIGVR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSI-ANQSNGKIKIIKNIKKIKINSLYSFTDTI 387
AI G+ T F YSD IS ++L + K SI + +GK K + K I +Y + +
Sbjct: 70 AIRGESTGFAYSDQISLDSLRRSTKKAHSIILTKGSGKTK---TLSKKTIEPIYKNVNPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
+ +EK LL R IAR D RVI+V A+L+G Y+ IL+ DG +V+DIRP +Q
Sbjct: 127 EGFSSKEKTDLLYRANYIARSLDHRVIEVNASLTGSYEQILVASTDGNLVSDIRPSIQFS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-------TDMILEKCVSNSVNSALINLEAKPAP 500
++++VE +G+RE G SG G R +YN+F ++ ++ +V AL+NL +K AP
Sbjct: 187 ISVLVEDHGKRERGRSGGGSRTDYNFFLNQDDFSKEIRIDHWSKEAVRIALLNLSSKEAP 246
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
+G VVLG GWPG+LLHEAIGHGLEGDFNRKG+S F+N IGK++AS+ TI+D+GT+ N
Sbjct: 247 SGTFPVVLGSGWPGVLLHEAIGHGLEGDFNRKGTSIFTNMIGKKVASELCTIIDDGTIKN 306
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
+RGS++IDDEG Q LIENGILK YMQD +NARLM + TGN RRES++ +P+PRMT
Sbjct: 307 QRGSLSIDDEGTLGQKNILIENGILKKYMQDKLNARLMGVESTGNGRRESYSCLPMPRMT 366
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYML+GK ++II SV G+YA NFSGGQVDIT+GKFVFS S+AY+IKNGKI P+K
Sbjct: 367 NTYMLSGKSKLDDIIKSVDYGIYAVNFSGGQVDITSGKFVFSTSEAYLIKNGKIVTPIKN 426
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
TLIG G +++K+SM+G+D+K+D G+G+CGKDGQ +PVG+GQP++K++++T+GGT
Sbjct: 427 TTLIGSGLEVMQKISMVGDDLKMDEGMGICGKDGQNIPVGIGQPSMKLENLTIGGT 482
>gi|417950706|ref|ZP_12593824.1| putative peptidase [Vibrio splendidus ATCC 33789]
gi|342806168|gb|EGU41406.1| putative peptidase [Vibrio splendidus ATCC 33789]
Length = 481
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 253/481 (52%), Positives = 341/481 (70%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N LL P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 INQIEEALLNPTGLTEQNIADTLASIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSL 380
+ GVGVRA+SG+KT F YSD I + L + + R IA Q NGK++ K +
Sbjct: 63 DCGVGVRAVSGEKTGFAYSDQIQLDGLKQSAIAARGIAKQGQNGKVQAFKRNAN---QTY 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y + ++S ++K +LL+ ++ R K+P V +V +LSG ++ +L+ DG DI
Sbjct: 120 YDAVNPLASWEKQQKTELLKSLDAYIRTKEPMVTEVSVSLSGVHEQMLVAATDGTYAGDI 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTD-----MILEKCVSNSVNSALINLE 495
RPLV+L ++++ +K RRE G++G GGR+ Y++F + + ++ AL+NLE
Sbjct: 180 RPLVRLSISVLAQKGDRRERGSAGGGGRFGYDFFLSDDKGTQVAYQFADEAIRQALVNLE 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEG FNRK SS FS +G+++ S TIVD+
Sbjct: 240 AVAAPAGAMPVVLGSGWPGVLLHEAVGHGLEGGFNRKESSVFSGKVGEQVTSSLCTIVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTL + RGS+N+DDEG Q TLIENGILKGYMQD +NARLM + TGN RRES+AH+P
Sbjct: 300 GTLTDLRGSLNVDDEGVNGQYNTLIENGILKGYMQDKLNARLMGGAPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G+ PEEII++V G+YA NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 360 MPRMTNTYMLPGEHTPEEIIATVDKGIYAPNFGGGQVDITSGKFVFSASEAYMIENGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
+PVKGATLIG G +++VSM+GND+ +D GVGVCGK GQ VPVGVGQPTLK+DS+TVGG
Sbjct: 420 HPVKGATLIGSGIEAMQQVSMVGNDLSIDRGVGVCGKAGQSVPVGVGQPTLKLDSLTVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|323491689|ref|ZP_08096867.1| hypothetical protein VIBR0546_05578 [Vibrio brasiliensis LMG 20546]
gi|323314051|gb|EGA67137.1| hypothetical protein VIBR0546_05578 [Vibrio brasiliensis LMG 20546]
Length = 481
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 251/482 (52%), Positives = 341/482 (70%), Gaps = 9/482 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N LL+ L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 INHVEDALLKTAGLSEQDIADTLSSIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSL 380
++GVGVRA++G+KT F YSD I L + + R IA Q NG+++ K
Sbjct: 63 DRGVGVRAVTGEKTGFAYSDQIQLEGLKQSAIAARGIAQQGQNGRVQAFKRSDN---QDY 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y + + S +K +LL+ ++ R K+P + +V +LSG ++ +L+ DG DI
Sbjct: 120 YGAVNPLESWKKEQKTQLLKELDAYIRTKEPLIKEVSVSLSGVHEQMLVAATDGTYAGDI 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTD-----MILEKCVSNSVNSALINLE 495
RPLV+L ++++ +K RRE G+SG GGR+ Y++F + + ++ AL+NLE
Sbjct: 180 RPLVRLSISVLAQKGDRRERGSSGGGGRFGYDFFLTENEGAKVAYQYADEAIRMALVNLE 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNRK SS FS +G+++ S+ TIVD+
Sbjct: 240 ADAAPAGTMPVVLGSGWPGVLLHEAVGHGLEGDFNRKESSVFSGKVGQKVTSELCTIVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTL + RGS+N+DDEG Q TLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTLKDLRGSLNVDDEGVSGQYNTLIENGVLKGYMQDKLNARLMGVNPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G+ PEEIIS+VK GLYA NF GGQVDIT+GKFVFSAS+AY+I++GKIT
Sbjct: 360 MPRMTNTYMLPGQHTPEEIISTVKKGLYAPNFGGGQVDITSGKFVFSASEAYLIEDGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G +++VSM+GND+ +D GVG+CGK GQ VPVGVGQPTLK+DS+TVGG
Sbjct: 420 RPVKGATLIGSGIEAMQQVSMVGNDLSIDRGVGICGKAGQSVPVGVGQPTLKLDSLTVGG 479
Query: 736 TN 737
T
Sbjct: 480 TE 481
>gi|254229271|ref|ZP_04922689.1| TldD/PmbA family [Vibrio sp. Ex25]
gi|262393163|ref|YP_003285017.1| TldD protein probably a protease [Vibrio sp. Ex25]
gi|151938195|gb|EDN57035.1| TldD/PmbA family [Vibrio sp. Ex25]
gi|262336757|gb|ACY50552.1| TldD protein probably a protease [Vibrio sp. Ex25]
Length = 481
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 251/480 (52%), Positives = 346/480 (72%), Gaps = 9/480 (1%)
Query: 263 NIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSIN 322
N LL P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I+
Sbjct: 4 NQIEQALLAPNGLTEQDIADTLASIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNID 63
Query: 323 QGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSLY 381
GVGVRA++G+KT F YSD I L + + R IA Q NGK++ K + + Y
Sbjct: 64 CGVGVRAVTGEKTGFAYSDQIQPEGLKQSAMAARGIAQQGQNGKVQAFKRTEN---QAYY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + ++ ++K +LL+ ++ R K+P + +V ++SG ++ +L+ DG DIR
Sbjct: 121 AAVNPLAEWEKQQKTELLKSLDAYIRTKEPLIKEVSISISGVHEQMLVAATDGTYAGDIR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF---TDMILEK--CVSNSVNSALINLEA 496
PLV+L ++++ +K RRE G++G GGR+ Y++F ++ + + ++ AL+NLEA
Sbjct: 181 PLVRLSISVLAQKGERRERGSAGGGGRFGYDFFLTESNGVKQAFHYADEAIRMALVNLEA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
+ APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS FS +G+++ S TIVD+G
Sbjct: 241 EAAPAGMMPVVLGSGWPGVLLHEAVGHGLEGDFNRKESSVFSGKMGQQVTSSLCTIVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL + RGS+N+DDEG Q TLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+
Sbjct: 301 TLKDLRGSLNVDDEGVNGQYNTLIENGVLKGYMQDKLNARLMGVNPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ PEEIIS+V+ GLYA NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 361 PRMTNTYMLPGEHTPEEIISTVEKGLYAPNFGGGQVDITSGKFVFSASEAYLIENGKITR 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G +++VSM+GND+ +D GVGVCGK GQ VPVGVGQPTLK+DS+TVGGT
Sbjct: 421 PVKGATLIGSGIEAMQQVSMVGNDLSIDKGVGVCGKAGQSVPVGVGQPTLKLDSLTVGGT 480
>gi|157273473|gb|ABV27372.1| TldD protein [Candidatus Chloracidobacterium thermophilum]
Length = 480
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 243/475 (51%), Positives = 329/475 (69%), Gaps = 2/475 (0%)
Query: 265 ARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQG 324
A + L+ + L L +LG DYAD YF++ ++ LEE ++KT N S++QG
Sbjct: 5 AITFFLDRYGLTIGDLNTLLGEALAAGGDYADLYFEYCRSNALNLEEHLIKTANRSVSQG 64
Query: 325 VGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFT 384
VGVR I+G+KT + Y+D+IS ++ A ++ IA + +++ + K + LY
Sbjct: 65 VGVRVIAGEKTGYAYTDEISPASIRQAARTAACIAKAATQQVRPVDVTPLAKKHDLYPCL 124
Query: 385 DTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLV 444
+T+S + I KI LL+ +++ DPR+ KV A+L+ E+ ++I +DGL+V DI+PL
Sbjct: 125 ETVSDLEIERKIALLKDIDERCSSADPRIQKVQASLTDEWKAVMIATSDGLLVGDIQPLA 184
Query: 445 QLFVTIIVEKNGRREIGNSGCGGRYNYNYFT--DMILEKCVSNSVNSALINLEAKPAPAG 502
++ V I +++G G +G GGR + FT ++ E +V A++ +A APAG
Sbjct: 185 RVHVMCIADQDGELRAGRAGGGGRRGFEMFTQGELSPEALAREAVRLAVLQFDAVEAPAG 244
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
M+VVLGPGWPGILLHEAIGHGLE DFNRK +SAFS+ +G+R+AS+ TIVD+GTL RR
Sbjct: 245 PMEVVLGPGWPGILLHEAIGHGLEADFNRKKTSAFSDMLGQRVASEACTIVDDGTLPGRR 304
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+NIDDEG+PT CT LIE GIL+ Y+ D +NARL+ + TGN RRES+ HIP+PRMTNT
Sbjct: 305 GSLNIDDEGHPTSCTVLIEKGILRNYINDYLNARLLGVPRTGNGRRESYRHIPMPRMTNT 364
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML G PE+II VK GLYA F GGQVDIT+GKFVFSAS+AY+I++G+IT PVK AT
Sbjct: 365 YMLAGTEMPEDIIRGVKRGLYAVQFGGGQVDITSGKFVFSASEAYLIEDGRITAPVKDAT 424
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
LIGHGP L KV+ +G D+KLD GVG CGKDGQ VPVGVG PT++I +TVGGT
Sbjct: 425 LIGHGPEALTKVTAVGCDLKLDLGVGTCGKDGQSVPVGVGLPTIRISELTVGGTQ 479
>gi|15617002|ref|NP_240215.1| TldD protein [Buchnera aphidicola str. APS (Acyrthosiphon pisum)]
gi|11387176|sp|P57478.1|TLDD_BUCAI RecName: Full=Protein TldD homolog
gi|25305203|pir||E84976 tldD protein [imported] - Buchnera sp. (strain APS)
gi|10039067|dbj|BAB13101.1| tldD protein [Buchnera aphidicola str. APS (Acyrthosiphon pisum)]
Length = 483
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 241/476 (50%), Positives = 336/476 (70%), Gaps = 11/476 (2%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL ++++ + L + ++DY D YFQ +E+WILE I+K GN+ + G+GVR
Sbjct: 10 LLNANKINDQDVFIALEELCTRQLDYGDLYFQSHIHESWILENSIIKEGNYHSDAGIGVR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSI-ANQSNGKIKIIKNIKKIKINSLYSFTDTI 387
AI G+ T F YSD IS ++L + K SI + +GK K + K I +Y + +
Sbjct: 70 AIRGESTGFAYSDQISLDSLRRSTKKAHSIILTKGSGKTK---TLSKKTIEPIYKNVNPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
+ +EK LL R IAR D RVI+V A+L+G Y+ IL+ DG +V+DIRP +Q
Sbjct: 127 EGFSSKEKTDLLYRANYIARSLDHRVIEVNASLTGSYEQILVASTDGNLVSDIRPSIQFS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-------TDMILEKCVSNSVNSALINLEAKPAP 500
++++VE +G+RE G SG G R +YN+F ++ ++ +V AL+NL +K A
Sbjct: 187 ISVLVEDHGKRERGRSGGGSRTDYNFFLNQDDSSKEIRIDHWSKEAVRIALLNLSSKEAL 246
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
+G VVLG GWPG+LLHEAIGHGLEGDFNRKG+S F+N IGK++AS+ TI+D+GT+ N
Sbjct: 247 SGTFPVVLGSGWPGVLLHEAIGHGLEGDFNRKGTSIFTNMIGKKVASELCTIIDDGTIKN 306
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
+RGS++IDDEG P Q LIENGILK YMQD +NARLM + TGN RRES++ +P+PRMT
Sbjct: 307 QRGSLSIDDEGTPGQKNILIENGILKKYMQDKLNARLMGVKSTGNGRRESYSCLPMPRMT 366
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYML+GK ++II SV G+YA NFSGGQVDIT+GKFVFS S+AY+IKNGKI P+K
Sbjct: 367 NTYMLSGKSKLDDIIKSVDYGIYAVNFSGGQVDITSGKFVFSTSEAYLIKNGKIVTPIKN 426
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
TLIG G +++K+SM+G+D+K+D G+G+CGKDGQ +PVG+GQP++K++++T+GGT
Sbjct: 427 TTLIGSGLEVMQKISMVGDDLKMDEGMGICGKDGQNIPVGIGQPSMKLENLTIGGT 482
>gi|384226200|ref|YP_005617363.1| TldD protein [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)]
gi|311086707|gb|ADP66788.1| TldD protein [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)]
Length = 483
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 241/476 (50%), Positives = 336/476 (70%), Gaps = 11/476 (2%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL ++++ + L + ++DY D YFQ +E+WILE I+K GN+ + G+GVR
Sbjct: 10 LLNANKINDQDVFIALEELCTRQLDYGDLYFQSHIHESWILENSIIKEGNYHSDAGIGVR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSI-ANQSNGKIKIIKNIKKIKINSLYSFTDTI 387
AI G+ T F YSD IS ++L + K SI + +GK K + K I +Y + +
Sbjct: 70 AIRGESTGFAYSDQISLDSLRRSTKKAHSIILTKGSGKTK---TLSKKTIEPIYKNVNPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
+ +EK LL R IAR D RVI+V A+L+G Y+ IL+ DG +V+DIRP +Q
Sbjct: 127 EGFSSKEKTDLLYRANYIARSLDHRVIEVNASLTGSYEQILVASTDGNLVSDIRPSIQFS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-------TDMILEKCVSNSVNSALINLEAKPAP 500
++++VE +G+RE G SG G R +YN+F ++ ++ +V AL+NL +K AP
Sbjct: 187 ISVLVEDHGKRERGRSGGGSRTDYNFFLNQDDFSKEIRIDHWSKEAVRIALLNLSSKEAP 246
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
+G VVLG GWPG+LLHEAIGHGLEGDFNRKG+S F+N IGK++AS+ TI+D+GT+ N
Sbjct: 247 SGTFPVVLGSGWPGVLLHEAIGHGLEGDFNRKGTSIFTNMIGKKVASELCTIIDDGTIKN 306
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
+RGS++IDDEG Q LIENGILK YMQD +NARLM + TGN RRES++ +P+PRMT
Sbjct: 307 QRGSLSIDDEGTLGQKNILIENGILKKYMQDKLNARLMGVKSTGNGRRESYSCLPMPRMT 366
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYML+GK ++II SV G+YA NFSGGQVDIT+GKFVFS S+AY+IKNGKI P+K
Sbjct: 367 NTYMLSGKSKLDDIIKSVDYGIYAVNFSGGQVDITSGKFVFSTSEAYLIKNGKIVTPIKN 426
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
TLIG G +++K+SM+G+D+K+D G+G+CGKDGQ +PVG+GQP++K++++T+GGT
Sbjct: 427 TTLIGSGLEVMQKISMVGDDLKMDEGMGICGKDGQNIPVGIGQPSMKLENLTIGGT 482
>gi|269961314|ref|ZP_06175680.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|424047796|ref|ZP_17785353.1| modulator of DNA gyrase family protein [Vibrio cholerae HENC-03]
gi|269833980|gb|EEZ88073.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|408883475|gb|EKM22258.1| modulator of DNA gyrase family protein [Vibrio cholerae HENC-03]
Length = 481
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 255/481 (53%), Positives = 346/481 (71%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N LL P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 INQIEQALLAPNGLTEQDIADTLASIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSL 380
+ GVGVRA++G+KT F YSD I + L + + R IA Q NGK+ K +
Sbjct: 63 DCGVGVRAVTGEKTGFAYSDQIQLDGLKQSAIAARGIAQQGQNGKVHAFKRSDN---QAY 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y + ++S ++K +LL ++ R K+P + +V ++SG ++ +L+ DG DI
Sbjct: 120 YDAVNPLASWEKQQKTELLLSLDAYIRTKEPMIKEVSISISGVHEQMLVAATDGTYAGDI 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF---TDMILE--KCVSNSVNSALINLE 495
RPLV+L ++++ EK RRE G++G GGR+ Y++F T+ + + + ++ AL+NLE
Sbjct: 180 RPLVRLSISVLAEKGDRRERGSAGGGGRFGYDFFLSETNGVKQAFQFADEAIRMALVNLE 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A+ APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS FS +G+++ S TIVD+
Sbjct: 240 AEAAPAGMMPVVLGSGWPGVLLHEAVGHGLEGDFNRKESSVFSGKMGEQVTSPLCTIVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTL + RGS+N+DDEG Q TLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTLKDLRGSLNVDDEGVNGQYNTLIENGVLKGYMQDKLNARLMGVNPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G+ PEEIIS+VK GLYA NF GGQVDIT+GKFVFSAS+AY+I++GKIT
Sbjct: 360 MPRMTNTYMLPGEHTPEEIISTVKKGLYAPNFGGGQVDITSGKFVFSASEAYLIEDGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G +++VSM+GND+ +D GVGVCGK GQ VPVGVGQPTLK+DSITVGG
Sbjct: 420 RPVKGATLIGSGIEAMQQVSMVGNDLSIDRGVGVCGKAGQSVPVGVGQPTLKLDSITVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|219682309|ref|YP_002468693.1| TldD protein [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)]
gi|219622042|gb|ACL30198.1| TldD protein [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)]
Length = 483
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 241/476 (50%), Positives = 336/476 (70%), Gaps = 11/476 (2%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL ++++ + L + ++DY D YFQ +E+WILE I+K GN+ + G+GVR
Sbjct: 10 LLNANKINDQDVFIALEELCTRQLDYGDLYFQSHIHESWILENSIIKEGNYHSDAGIGVR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSI-ANQSNGKIKIIKNIKKIKINSLYSFTDTI 387
AI G+ T F YSD IS ++L + K SI + +GK K + K I +Y + +
Sbjct: 70 AIRGESTGFAYSDQISLDSLRRSTKKAHSIILTKGSGKTK---TLSKKTIEPIYKNVNPL 126
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
+ +EK LL R IAR D RVI+V A+L+G Y+ IL+ DG +V+DIRP +Q
Sbjct: 127 EGFSSQEKTDLLYRANYIARSLDHRVIEVNASLTGSYEQILVASTDGNLVSDIRPSIQFS 186
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-------TDMILEKCVSNSVNSALINLEAKPAP 500
++++VE +G+RE G SG G R +YN+F ++ ++ +V AL+NL +K AP
Sbjct: 187 ISVLVEDHGKRERGRSGGGSRTDYNFFLNQDDFSKEIRIDHWSKEAVRIALLNLSSKEAP 246
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
+G VVLG GWPG+LLHEAIGHGLEGDFNRKG+S F+N IGK++AS+ TI+D+GT+ N
Sbjct: 247 SGTFPVVLGSGWPGVLLHEAIGHGLEGDFNRKGTSIFTNMIGKKVASELCTIIDDGTIKN 306
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
+RGS++IDDEG Q LIENGILK YMQD +NARLM + TGN RRES++ +P+PRMT
Sbjct: 307 QRGSLSIDDEGTLGQKNILIENGILKKYMQDKLNARLMGVKSTGNGRRESYSCLPMPRMT 366
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYML+GK ++II SV G+YA NFSGGQVDIT+GKFVFS S+AY+IKNGKI P+K
Sbjct: 367 NTYMLSGKSKLDDIIKSVDYGIYAVNFSGGQVDITSGKFVFSTSEAYLIKNGKIVTPIKN 426
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
TLIG G +++K+SM+G+D+K+D G+G+CGKDGQ +PVG+GQP++K++++T+GGT
Sbjct: 427 TTLIGSGLEVMQKISMVGDDLKMDEGMGICGKDGQNIPVGIGQPSMKLENLTIGGT 482
>gi|114328849|ref|YP_746006.1| protease TldD [Granulibacter bethesdensis CGDNIH1]
gi|114317023|gb|ABI63083.1| microcin-processing peptidase 2 (TldD) [Granulibacter bethesdensis
CGDNIH1]
Length = 482
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 235/463 (50%), Positives = 323/463 (69%), Gaps = 5/463 (1%)
Query: 275 LDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDK 334
LD+ LKI + D + + ++ ++E L++G ++ NF G G+RA++G+
Sbjct: 22 LDQDSALKITQDALLGAED-GELFLEYRESEVVSLDDGRIRGANFDTATGFGLRAVAGEA 80
Query: 335 TAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIRE 394
T + ++ +IS+ L A + S+A+ G + + LYS + + S++
Sbjct: 81 TGYAHAGEISEAALRRAATTVASVASGHGGTLAEPPRATNAR---LYSDANPLPSVDFAT 137
Query: 395 KIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEK 454
+ LL ++ AR KD RV +V A++ GE+ + I R DGL VAD+RPLV+L + +IVE+
Sbjct: 138 RTALLATIDAYAREKDARVRQVTASIVGEWQAVQIIRADGLRVADLRPLVRLNIAVIVEQ 197
Query: 455 NGRREIGNSGCGGRYNYN-YFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWP 513
+GRRE G+ G GGRY Y+ T+ + + ++ ALINL+++PAPAG M VVLG GWP
Sbjct: 198 DGRRESGSFGTGGRYGYDRLLTEETWKNGIDEALRQALINLDSRPAPAGEMPVVLGSGWP 257
Query: 514 GILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNP 573
GILLHEAIGHGLEGDFNRK +SAF+ +G+R+A+ +T+VD+GTL +RRGS+ +DDEG P
Sbjct: 258 GILLHEAIGHGLEGDFNRKKTSAFAGLMGQRVAAPGVTVVDDGTLPDRRGSLTVDDEGTP 317
Query: 574 TQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEE 633
+ T LIE+GIL GYMQD +NARLM + TGN RR+S+A+ P+PRMTNT ML G EE
Sbjct: 318 SSRTVLIEDGILTGYMQDRLNARLMGVRPTGNGRRQSYAYAPMPRMTNTIMLGGTHEKEE 377
Query: 634 IISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKK 693
+I SVK GLYA NF GG VDIT+GKFVFSAS+AY+I++G+IT PVKGATLIG+GP+ L K
Sbjct: 378 MIRSVKRGLYAANFGGGSVDITSGKFVFSASEAYLIEDGRITAPVKGATLIGNGPDSLTK 437
Query: 694 VSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
V MIG D+ LDPG+G CGK GQ VPVGVGQPTLK+ +T+GGT
Sbjct: 438 VEMIGPDVALDPGIGTCGKSGQGVPVGVGQPTLKLTGLTIGGT 480
>gi|359408141|ref|ZP_09200613.1| putative Zn-dependent protease-like protein [SAR116 cluster alpha
proteobacterium HIMB100]
gi|356676898|gb|EHI49247.1| putative Zn-dependent protease-like protein [SAR116 cluster alpha
proteobacterium HIMB100]
Length = 479
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 229/464 (49%), Positives = 329/464 (70%), Gaps = 4/464 (0%)
Query: 275 LDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDK 334
LD +KI+ + + D D + + E ++G +KT + + G G+RAI G+
Sbjct: 17 LDRDRTMKIVASCLEG-ADDGDLFLEMKHAEMLAFDDGRLKTATYDQSAGFGLRAIVGEA 75
Query: 335 TAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIRE 394
AF ++ ++S+ L A ++ ++A+ +G++ + + SLYS + ++ +
Sbjct: 76 DAFAHAGELSEAALTRAAETVSAVASGHSGQLAVAPEAGRNL--SLYSDANPLNQTAFED 133
Query: 395 KIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEK 454
K++LL++++ AR KDPRV +V A+++G + + I R DG ADIRPLV+L V ++ EK
Sbjct: 134 KVELLQKIDAYAREKDPRVKQVSASIAGSWQAVQIIRPDGTRYADIRPLVRLNVAVVAEK 193
Query: 455 NGRREIGNSGCGGRYNYN-YFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWP 513
NGR E G+SG GGR+ ++ Y D I + V ++ A++NL++ APAG M++VLG GWP
Sbjct: 194 NGRMESGSSGTGGRFMFDRYLQDDIWQAEVDEALRIAMLNLDSVGAPAGEMEIVLGSGWP 253
Query: 514 GILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNP 573
G++LHEA+GHGLEGDFNRKG+S FS IG+++A+K +T+VD+GT+ +RRGSI IDDEG
Sbjct: 254 GVMLHEAVGHGLEGDFNRKGTSVFSGRIGEQVAAKGVTVVDDGTMQDRRGSITIDDEGTE 313
Query: 574 TQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEE 633
+ LIE+G+LKGYMQD NARLM + TGN RR+S+AH+P+PRMTNT+M NG + +E
Sbjct: 314 SARNVLIEDGVLKGYMQDRQNARLMGVHATGNGRRQSYAHLPMPRMTNTFMENGSYAADE 373
Query: 634 IISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKK 693
I++S+K G+YA NF GGQVDIT+GKFVFSAS+AY+++NGKI PVKGATLIG GP+ + K
Sbjct: 374 IVASMKKGIYAVNFGGGQVDITSGKFVFSASEAYLVENGKIGAPVKGATLIGSGPDAMSK 433
Query: 694 VSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
++MIG+D+ LD GVG CGK GQ VPVGVGQPTLK+ ITVGGT
Sbjct: 434 ITMIGDDLALDRGVGTCGKAGQSVPVGVGQPTLKMGGITVGGTE 477
>gi|375266762|ref|YP_005024205.1| TldD protein probably a protease [Vibrio sp. EJY3]
gi|369842082|gb|AEX23226.1| TldD protein probably a protease [Vibrio sp. EJY3]
Length = 481
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 252/480 (52%), Positives = 345/480 (71%), Gaps = 9/480 (1%)
Query: 263 NIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSIN 322
N L+ P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I+
Sbjct: 4 NQIEQALIAPNGLTEQDIADTLASIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNID 63
Query: 323 QGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSLY 381
GVGVRA++G+KT F YSD I+ + L + + R IA Q NGK++ K + Y
Sbjct: 64 CGVGVRAVTGEKTGFAYSDQINLDGLKQSAIAARGIAQQGQNGKVQAFKRTDN---QAYY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ ++ ++K +LL+ ++ R K+P + +V ++SG ++ +L+ DG DIR
Sbjct: 121 EAVNPLAGWEKQQKTELLKSLDAYIRTKEPLIKEVSISISGVHEQMLVAATDGTYAGDIR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF---TDMILEK--CVSNSVNSALINLEA 496
PLV+L ++++ +K RRE G++G GGR+ Y++F TD + + ++ AL+NLEA
Sbjct: 181 PLVRLSISVLAQKGERRERGSAGGGGRFGYDFFLSETDGVKQAFHYADEAIRMALVNLEA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
+ APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS FS +G+++ S TIVD+G
Sbjct: 241 EAAPAGMMPVVLGSGWPGVLLHEAVGHGLEGDFNRKESSVFSGKMGQQVTSSLCTIVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL + RGS+N+DDEG Q TLIENG+LKGYMQD +NARLM + TGN RRES+AH+P+
Sbjct: 301 TLKDLRGSLNVDDEGVNGQYNTLIENGVLKGYMQDKLNARLMGVKPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ PEEIIS+V+ GLYA NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 361 PRMTNTYMLPGEHTPEEIISTVEKGLYAPNFGGGQVDITSGKFVFSASEAYLIENGKITR 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G +++VSM+GND+ +D GVGVCGK GQ VPVGVGQPTLK+DS+TVGGT
Sbjct: 421 PVKGATLIGSGIEAMQQVSMVGNDLSIDKGVGVCGKAGQSVPVGVGQPTLKLDSLTVGGT 480
>gi|27364841|ref|NP_760369.1| TldD protein, probably a protease [Vibrio vulnificus CMCP6]
gi|27360986|gb|AAO09896.1| TldD protein, probably a protease [Vibrio vulnificus CMCP6]
Length = 481
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 253/482 (52%), Positives = 343/482 (71%), Gaps = 9/482 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N LL P L + + LG++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 INQIEEALLAPGGLTAEDIAATLGSIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+ GVGVRA++G+KT F YSD I + L + + R IA Q NG+++ K +
Sbjct: 63 DCGVGVRAVTGEKTGFAYSDQIQLDGLKQSAIAARGIAQQGQNGQVRAFKRSEN---QHY 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ + ++ ++K +LL+ ++ R K+P + +V +LSG ++ +L+ DG DI
Sbjct: 120 YAAVNPLAGWEKQQKTELLKSLDAYIRTKEPLIKEVSISLSGVHEQMLVAATDGTYAGDI 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF---TDMILEKC--VSNSVNSALINLE 495
RPLV+L ++++ EK RRE G++G GGR+ Y++F D + ++ AL+NLE
Sbjct: 180 RPLVRLSISVLAEKGERRERGSAGGGGRFGYDFFIGDEDGVQRAFHFADEAIRMALVNLE 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS FS +G+++ S TIVD+
Sbjct: 240 ADAAPAGSMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSVFSGKVGEQVTSSLCTIVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTL + RGS+N+DDEG Q TLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTLKDLRGSLNVDDEGVNGQYNTLIENGVLKGYMQDKLNARLMGVNPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G+ PEEIIS+VK GLYA NF GGQVDIT+GKFVFS S+AY+I++GKIT
Sbjct: 360 MPRMTNTYMLPGQHTPEEIISTVKKGLYAPNFGGGQVDITSGKFVFSTSEAYLIEDGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G +++VSM+GND+ +D GVGVCGK GQ +PVGVGQPTLK+DSITVGG
Sbjct: 420 RPVKGATLIGSGIEAMQQVSMVGNDLSIDRGVGVCGKAGQSIPVGVGQPTLKLDSITVGG 479
Query: 736 TN 737
T
Sbjct: 480 TE 481
>gi|410945013|ref|ZP_11376754.1| TldD protein [Gluconobacter frateurii NBRC 101659]
Length = 487
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 231/448 (51%), Positives = 318/448 (70%), Gaps = 6/448 (1%)
Query: 292 VDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINA 351
VD + + ++ +NE L++G +++ +F+ + G G+RA+ G +TAF +SD++S+ L A
Sbjct: 42 VDDGELFLEYRENEGISLDDGTIRSASFTTSSGFGLRAVLGTETAFAHSDEMSEEALARA 101
Query: 352 VKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDP 411
V + ++ G+ I+ LY+ + + + +L ++ R D
Sbjct: 102 VSTVGAV---RQGRSGIMAPGPHATNQRLYADARPLEGTDFAARAAVLGEIDTYVRALDS 158
Query: 412 RVIKVIANLSGEYDVILITR--NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRY 469
RV++V A+LS E+ + I R + G VAD+RPLV+L V+++VEK+GRRE G G GGRY
Sbjct: 159 RVVQVSASLSSEWQAVQIMRRADAGGRVADLRPLVRLNVSVVVEKDGRRESGGHGQGGRY 218
Query: 470 NYNYFTDM-ILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGD 528
+ D + V+ ++ AL+NL+A PAPAG M VVLGPGWPGILLHEA+GHGLEGD
Sbjct: 219 ELSRLLDAGTWKAAVNEALRQALLNLDAAPAPAGEMDVVLGPGWPGILLHEAVGHGLEGD 278
Query: 529 FNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGY 588
FNRKG+S+F+ +GKR+AS +T++D+GTL RRGS++IDDEG PT T LIE+GIL GY
Sbjct: 279 FNRKGTSSFTGMVGKRVASPGVTVIDDGTLPERRGSLSIDDEGTPTGRTVLIEDGILTGY 338
Query: 589 MQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFS 648
+QD +NARLM +S TGN RRES+AH P+PRMTNT ML G EE+I S K GLYA NF
Sbjct: 339 LQDRLNARLMGVSPTGNGRRESYAHAPMPRMTNTVMLEGSATTEEMIRSTKRGLYAVNFG 398
Query: 649 GGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVG 708
GGQVDIT+GKFVF+AS+AY+I++GK+T PVKGATLIG+G + + ++S+IG+DM LDPG+G
Sbjct: 399 GGQVDITSGKFVFAASEAYLIEDGKVTRPVKGATLIGNGADAMNQISLIGSDMALDPGIG 458
Query: 709 VCGKDGQMVPVGVGQPTLKIDSITVGGT 736
CGK GQ VPVGVGQPTLK+ +TVGGT
Sbjct: 459 TCGKAGQGVPVGVGQPTLKLSGLTVGGT 486
>gi|156975912|ref|YP_001446819.1| hypothetical protein VIBHAR_03678 [Vibrio harveyi ATCC BAA-1116]
gi|156527506|gb|ABU72592.1| hypothetical protein VIBHAR_03678 [Vibrio harveyi ATCC BAA-1116]
Length = 481
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 254/481 (52%), Positives = 346/481 (71%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N LL P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 INQIEQALLAPNGLTEQDIADTLASIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSL 380
+ GVGVRA++G+KT F YSD I + L + + R IA Q NGK+ K +
Sbjct: 63 DCGVGVRAVTGEKTGFAYSDQIQLDGLKQSAIAARGIAQQGQNGKVHAFKRSDN---QAY 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y + ++S ++K +LL ++ R K+P + +V ++SG ++ +L+ DG DI
Sbjct: 120 YDAVNPLASWEKQQKTELLLSLDAYIRTKEPLIKEVSISISGVHEQMLVAATDGTYAGDI 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF---TDMILE--KCVSNSVNSALINLE 495
RPLV+L ++++ EK RRE G++G GGR+ Y++F T+ + + + ++ AL+NLE
Sbjct: 180 RPLVRLSISVLAEKGDRRERGSAGGGGRFGYDFFLSETNGVKQAFQFADEAIRMALVNLE 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A+ APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS FS +G+++ S TIVD+
Sbjct: 240 AEAAPAGMMPVVLGSGWPGVLLHEAVGHGLEGDFNRKESSVFSGKMGEQVTSPLCTIVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTL + RGS+N+DDEG Q TLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTLKDLRGSLNVDDEGVNGQYNTLIENGVLKGYMQDKLNARLMGVNPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G+ PEE+IS+VK GLYA NF GGQVDIT+GKFVFSAS+AY+I++GKIT
Sbjct: 360 MPRMTNTYMLPGEHTPEELISTVKKGLYAPNFGGGQVDITSGKFVFSASEAYLIEDGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G +++VSM+GND+ +D GVGVCGK GQ VPVGVGQPTLK+DSITVGG
Sbjct: 420 RPVKGATLIGSGIEAMQQVSMVGNDLSIDRGVGVCGKAGQSVPVGVGQPTLKLDSITVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|424034115|ref|ZP_17773523.1| modulator of DNA gyrase family protein [Vibrio cholerae HENC-01]
gi|408873609|gb|EKM12804.1| modulator of DNA gyrase family protein [Vibrio cholerae HENC-01]
Length = 481
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 255/481 (53%), Positives = 345/481 (71%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N LL P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 INQIEQALLAPNGLTEQDIADTLASIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSL 380
+ GVGVRA++G+KT F YSD I L + + R IA Q NGK+ K +
Sbjct: 63 DCGVGVRAVTGEKTGFAYSDQIQLEGLKQSAIAARGIAQQGQNGKVHAFKRSDN---QAY 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y + ++S ++K +LL ++ R K+P + +V ++SG ++ +L+ DG DI
Sbjct: 120 YDAVNPLASWEKQQKTELLLSLDAYIRTKEPLIKEVSISISGVHEQMLVAATDGTYAGDI 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF---TDMILE--KCVSNSVNSALINLE 495
RPLV+L ++++ EK RRE G++G GGR+ Y++F T+ + + + ++ AL+NLE
Sbjct: 180 RPLVRLSISVLAEKGDRRERGSAGGGGRFGYDFFLSETNGVKQAFQFADEAIRMALVNLE 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A+ APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS FS +G+++ S TIVD+
Sbjct: 240 AEAAPAGMMPVVLGSGWPGVLLHEAVGHGLEGDFNRKESSVFSGKMGEQVTSPLCTIVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTL + RGS+N+DDEG Q TLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTLKDLRGSLNVDDEGVNGQYNTLIENGVLKGYMQDKLNARLMGVNPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G+ PEEIIS+VK GLYA NF GGQVDIT+GKFVFSAS+AY+I++GKIT
Sbjct: 360 MPRMTNTYMLPGEHTPEEIISTVKKGLYAPNFGGGQVDITSGKFVFSASEAYLIEDGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G +++VSM+GND+ +D GVGVCGK GQ VPVGVGQPTLK+DSITVGG
Sbjct: 420 RPVKGATLIGSGIEAMQQVSMVGNDLSIDRGVGVCGKAGQSVPVGVGQPTLKLDSITVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|373450521|ref|ZP_09542506.1| Peptidase U62, modulator of DNA gyrase [Wolbachia pipientis wAlbB]
gi|371932284|emb|CCE77515.1| Peptidase U62, modulator of DNA gyrase [Wolbachia pipientis wAlbB]
Length = 476
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 256/458 (55%), Positives = 333/458 (72%), Gaps = 7/458 (1%)
Query: 280 LLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFY 339
+ KI+ N N D + + +F ++E+ + ++ I+K + +I +G G+R+ D T+F
Sbjct: 19 VYKIVNNALSNS-DGGELFLEFCQSESLVFDDNILKHMDLNIRRGFGLRSFCEDSTSFVC 77
Query: 340 SDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLL 399
S +IS+ + A +S A+ S K + ++ K SLYS + I+ +++ KIKLL
Sbjct: 78 SSEISEKEISKAASMVKSSASLS--KTNSVNLNEEAK--SLYSTINPINEMDLSSKIKLL 133
Query: 400 ERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRRE 459
V + R K+ V +V L+GE+ V+ I ++D + +DIRPLV+ V +IVEKNGR E
Sbjct: 134 NEVNEYVRSKNNCVKQVKITLNGEWQVVQIIKDDHRL-SDIRPLVRFNVLVIVEKNGRAE 192
Query: 460 IGNSGCGGRYNYNYFTDMILEKCVSN-SVNSALINLEAKPAPAGIMKVVLGPGWPGILLH 518
G++G GGR +Y+ F K V+N ++ AL+NLEA PAPAG M VVLG GWPGILLH
Sbjct: 193 RGSAGHGGRDSYSKFVSEKKWKEVANQALEQALVNLEAIPAPAGEMTVVLGSGWPGILLH 252
Query: 519 EAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTT 578
EA+GHGLEGDFNRKG SAFSN +GK++A+ IT++D+GTL N RGSI+IDDEG
Sbjct: 253 EAVGHGLEGDFNRKGISAFSNSMGKQVAASNITVIDDGTLPNLRGSISIDDEGTLPGYNV 312
Query: 579 LIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSV 638
LIE+GILKGYMQD MNA+LM ++ TGN RRES+ + +PRMTNTYML GK+ PEEIISSV
Sbjct: 313 LIEDGILKGYMQDHMNAKLMGVNPTGNGRRESYKEVTMPRMTNTYMLPGKYTPEEIISSV 372
Query: 639 KNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIG 698
K GLYA NF GGQVDIT+GKFVFS+S+AY+IKNGKIT P+KGATLIG GP +LKKVSMIG
Sbjct: 373 KRGLYAVNFGGGQVDITSGKFVFSSSEAYLIKNGKITQPIKGATLIGDGPTVLKKVSMIG 432
Query: 699 NDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
ND+KLDPGVG C KDGQ VPVGVGQPTLK+D+ITVGGT
Sbjct: 433 NDLKLDPGVGTCSKDGQNVPVGVGQPTLKVDAITVGGT 470
>gi|28899458|ref|NP_799063.1| TldD protein [Vibrio parahaemolyticus RIMD 2210633]
gi|153839607|ref|ZP_01992274.1| TldD protein [Vibrio parahaemolyticus AQ3810]
gi|260363374|ref|ZP_05776226.1| TldD protein [Vibrio parahaemolyticus K5030]
gi|260879308|ref|ZP_05891663.1| TldD protein [Vibrio parahaemolyticus AN-5034]
gi|260895733|ref|ZP_05904229.1| TldD protein [Vibrio parahaemolyticus Peru-466]
gi|260900305|ref|ZP_05908700.1| TldD protein [Vibrio parahaemolyticus AQ4037]
gi|28807694|dbj|BAC60947.1| TldD protein [Vibrio parahaemolyticus RIMD 2210633]
gi|149746878|gb|EDM57866.1| TldD protein [Vibrio parahaemolyticus AQ3810]
gi|308087396|gb|EFO37091.1| TldD protein [Vibrio parahaemolyticus Peru-466]
gi|308093094|gb|EFO42789.1| TldD protein [Vibrio parahaemolyticus AN-5034]
gi|308107551|gb|EFO45091.1| TldD protein [Vibrio parahaemolyticus AQ4037]
gi|308111185|gb|EFO48725.1| TldD protein [Vibrio parahaemolyticus K5030]
Length = 481
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 252/481 (52%), Positives = 345/481 (71%), Gaps = 9/481 (1%)
Query: 263 NIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSIN 322
N LL P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I+
Sbjct: 4 NQIEQALLAPNGLTEQDIADTLASIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNID 63
Query: 323 QGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSLY 381
GVGVRA++G+KT F YSD I+ L + + R IA Q NGK++ K + + Y
Sbjct: 64 CGVGVRAVTGEKTGFAYSDQINPEGLKQSAIAARGIALQGQNGKVQAFKRSEN---QAYY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ ++S ++K +LL ++ R K+P + +V ++SG ++ +L+ DG D R
Sbjct: 121 DAVNPLASWEKQQKTELLMSLDAYIRTKEPLIKEVSISISGVHEQMLVAATDGTYAGDTR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF---TDMILEKC--VSNSVNSALINLEA 496
PLV+L ++++ +K RRE G++G GGR+ Y++F TD + + ++ AL+NLEA
Sbjct: 181 PLVRLSISVLAQKGDRRERGSAGGGGRFGYDFFLSETDGVKQAFHFADEAIRMALVNLEA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
+ APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS FS +G+++ S TIVD+G
Sbjct: 241 EAAPAGMMPVVLGSGWPGVLLHEAVGHGLEGDFNRKESSVFSGKMGQQVTSSLCTIVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL + RGS+N+DDEG Q TLIENG+LKGYMQD +NARLM +S TGN RRES+AH+P+
Sbjct: 301 TLKDLRGSLNVDDEGVNGQYNTLIENGVLKGYMQDKLNARLMGVSPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ PEEIIS+VK G+YA NF GGQVDIT+GKFVFSAS+AY+I++GK+T
Sbjct: 361 PRMTNTYMLPGEHTPEEIISTVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIEDGKVTR 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G +++VSM+GND+ +D GVGVCGK GQ VPVGVGQPTLK+DS+TVGGT
Sbjct: 421 PVKGATLIGSGIEAMQQVSMVGNDLSIDKGVGVCGKAGQSVPVGVGQPTLKLDSLTVGGT 480
Query: 737 N 737
Sbjct: 481 E 481
>gi|320155231|ref|YP_004187610.1| TldD protein [Vibrio vulnificus MO6-24/O]
gi|319930543|gb|ADV85407.1| TldD protein, part of proposed TldE/TldD proteolytic complex
[Vibrio vulnificus MO6-24/O]
Length = 481
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 252/482 (52%), Positives = 344/482 (71%), Gaps = 9/482 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N LL P L + + LG++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 INQIEEALLAPGGLTAEDIAATLGSIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+ GVGVRA++G+KT F YSD I + L + + R IA Q NG+++ K +
Sbjct: 63 DCGVGVRAVTGEKTGFAYSDQIQLDGLKQSAIAARGIAQQGQNGQVRAFKRSEN---QHY 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ + ++ ++K +LL+ ++ R K+P + +V +LSG ++ +L+ DG DI
Sbjct: 120 YAAVNPLAGWEKQQKTELLKSLDAYIRTKEPLIKEVSISLSGVHEQMLVAATDGTYAGDI 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF--TDMILEKC---VSNSVNSALINLE 495
RPLV+L ++++ EK RRE G++G GGR+ Y++F + ++ ++ AL+NLE
Sbjct: 180 RPLVRLSISVLAEKGERRERGSAGGGGRFGYDFFLGDENGAQRAFHFADEAIRMALVNLE 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS FS +G+++ S TIVD+
Sbjct: 240 ADAAPAGSMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSVFSGKVGEQVTSSLCTIVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTL + RGS+N+DDEG Q TLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTLKDLRGSLNVDDEGVNGQYNTLIENGVLKGYMQDKLNARLMGVNPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G+ PEEIIS+VK GLYA NF GGQVDIT+GKFVFS S+AY+I++GKIT
Sbjct: 360 MPRMTNTYMLPGQHTPEEIISTVKKGLYAPNFGGGQVDITSGKFVFSTSEAYLIEDGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G +++VSM+GND+ +D GVGVCGK GQ +PVGVGQPTLK+DSITVGG
Sbjct: 420 RPVKGATLIGSGIEAMQQVSMVGNDLSIDRGVGVCGKAGQSIPVGVGQPTLKLDSITVGG 479
Query: 736 TN 737
T
Sbjct: 480 TE 481
>gi|451975510|ref|ZP_21926698.1| TldD/PmbA family [Vibrio alginolyticus E0666]
gi|451930567|gb|EMD78273.1| TldD/PmbA family [Vibrio alginolyticus E0666]
Length = 481
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 251/480 (52%), Positives = 344/480 (71%), Gaps = 9/480 (1%)
Query: 263 NIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSIN 322
N LL P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I+
Sbjct: 4 NQIEQALLAPNGLTEQDIADTLASIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNID 63
Query: 323 QGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSLY 381
GVGVRA++G+KT F YSD I L + + R IA Q NGK+ K + + Y
Sbjct: 64 CGVGVRAVTGEKTGFAYSDQIQPEGLKQSAMAARGIAQQGQNGKVHAFKRTEN---QAYY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + ++ ++K +LL+ ++ R K+P + +V ++SG ++ +L+ DG DIR
Sbjct: 121 AAVNPLAGWEKQQKTELLKSLDAYIRTKEPLIKEVSISISGVHEQMLVAATDGTYAGDIR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF---TDMILEK--CVSNSVNSALINLEA 496
PLV+L ++++ +K RRE G++G GGR+ Y++F ++ + + ++ AL+NLEA
Sbjct: 181 PLVRLSISVLAQKGERRERGSAGGGGRFGYDFFLTESNGVKQAFHYADEAIRMALVNLEA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
+ APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS FS +G+ + S TIVD+G
Sbjct: 241 EAAPAGMMPVVLGSGWPGVLLHEAVGHGLEGDFNRKESSVFSGKMGQHVTSSLCTIVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL + RGS+N+DDEG Q TLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+
Sbjct: 301 TLKDLRGSLNVDDEGVNGQYNTLIENGVLKGYMQDKLNARLMGVNPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ PEEIIS+V+ GLYA NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 361 PRMTNTYMLPGEHTPEEIISTVEKGLYAPNFGGGQVDITSGKFVFSASEAYLIENGKITR 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G +++VSM+GND+ +D GVGVCGK GQ VPVGVGQPTLK+DS+TVGGT
Sbjct: 421 PVKGATLIGSGIEAMQQVSMVGNDLSIDKGVGVCGKAGQSVPVGVGQPTLKLDSLTVGGT 480
>gi|190571345|ref|YP_001975703.1| tldD protein [Wolbachia endosymbiont of Culex quinquefasciatus Pel]
gi|213018741|ref|ZP_03334549.1| tldD protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB]
gi|190357617|emb|CAQ55058.1| tldD protein [Wolbachia endosymbiont of Culex quinquefasciatus Pel]
gi|212995692|gb|EEB56332.1| tldD protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB]
Length = 476
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 254/458 (55%), Positives = 334/458 (72%), Gaps = 7/458 (1%)
Query: 280 LLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFY 339
+ KI+ N N D + + +F ++E+ I ++ I+K + +I +G G+R+ D T+F
Sbjct: 19 VYKIVNNALSNS-DGGELFLEFCQSESLIFDDNILKHMDLNIRRGFGLRSFCEDSTSFVC 77
Query: 340 SDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLL 399
S +IS+ + A +S A+ S K + ++ K SLYS + I+ +++ KIKLL
Sbjct: 78 SSEISEKEISKAASMVKSSASLS--KTNSVNLNEEAK--SLYSKINPINEMDLSSKIKLL 133
Query: 400 ERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRRE 459
+ + R K+ V +V L+GE+ V+ I ++D + +DIRPLV+ V +IVEKNGR E
Sbjct: 134 NEINEYVRSKNNCVKQVKITLNGEWQVVQIIKDDHRL-SDIRPLVRFNVLVIVEKNGRAE 192
Query: 460 IGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLH 518
G++G GGR +Y+ F ++ +K + ++ AL+NLEA PAPAG M VVLG GWPGILLH
Sbjct: 193 RGSAGHGGRDSYSKFVSEKKWKKVANQALEQALVNLEAIPAPAGEMTVVLGSGWPGILLH 252
Query: 519 EAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTT 578
EA+GHGLEGDFNRKG SAFSN +GK++A+ IT++D+GTL N RGSI+IDDEG
Sbjct: 253 EAVGHGLEGDFNRKGISAFSNSMGKQVAASNITVIDDGTLPNLRGSISIDDEGTLPGYNV 312
Query: 579 LIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSV 638
LIE+GILKGYMQD MNA+LM ++ TGN RRES+ + +PRMTNTYML GK+ PEEIISSV
Sbjct: 313 LIEDGILKGYMQDHMNAKLMGVNPTGNGRRESYKEVTMPRMTNTYMLAGKYAPEEIISSV 372
Query: 639 KNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIG 698
K GLYA NF GGQVDIT+GKFVFS+S+AY+I+NGKIT PVKGATLIG GP +LKKVSMIG
Sbjct: 373 KRGLYAVNFGGGQVDITSGKFVFSSSEAYLIENGKITQPVKGATLIGDGPTVLKKVSMIG 432
Query: 699 NDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
ND+KLDPGVG C KDGQ VPVGVGQPTLK+D+ITVGGT
Sbjct: 433 NDLKLDPGVGTCSKDGQNVPVGVGQPTLKVDAITVGGT 470
>gi|294084690|ref|YP_003551448.1| peptidase U62 modulator of DNA gyrase [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292664263|gb|ADE39364.1| peptidase U62 modulator of DNA gyrase [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 484
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 226/468 (48%), Positives = 333/468 (71%), Gaps = 9/468 (1%)
Query: 270 LEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRA 329
L+P DL E I+ L D + + + +E+ + ++G +K+ ++ + G G+RA
Sbjct: 22 LDP-DLAEAIVRDALAG-----ADDGELFMEMRHSESLVFDDGRLKSASYDQSSGFGLRA 75
Query: 330 ISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISS 389
I+G+ + ++ ++S++ L A S +++ + NG + + + LYS + ++
Sbjct: 76 IAGEAHGYAHAGELSEDALRRAAASVKAVTSGYNGSLSVGPAAGANQ--PLYSDANPLNH 133
Query: 390 INIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVT 449
K+ LL+ ++ AR DPRV++V A+L+G + + I R+DG+ VADIRPLV+L V+
Sbjct: 134 TPFEHKVTLLQEMDAYARSADPRVVQVSASLAGSWQAVQIMRSDGVRVADIRPLVRLGVS 193
Query: 450 IIVEKNGRREIGNSGCGGRYNY-NYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVL 508
++VE+NGR E G +G GGR + +Y + + + ++ A++NL++ APAG M+VVL
Sbjct: 194 VVVEQNGRMESGGTGAGGRVMFTDYMQPEVWKAQIDEALRMAVLNLDSIAAPAGEMEVVL 253
Query: 509 GPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINID 568
G GWPG++LHEA+GHGLEGDFNRKG+S FS +G+++ASK +T++D+GT+++RRGSI +D
Sbjct: 254 GSGWPGVMLHEAVGHGLEGDFNRKGTSVFSGRVGEQVASKGVTVIDDGTISDRRGSITVD 313
Query: 569 DEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGK 628
DEG P++ LIE+G+LKGYMQD NARLM + TGN RR+S+ H P+PRMTNTYM NGK
Sbjct: 314 DEGTPSKRNVLIEDGVLKGYMQDRQNARLMGVEATGNGRRQSYEHAPMPRMTNTYMENGK 373
Query: 629 FHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGP 688
P+EI++S+K G+YA NF GGQVDIT+GKFVFSA++AY+++NGKI PVKGATLIG+GP
Sbjct: 374 DDPQEIVASIKKGIYAVNFGGGQVDITSGKFVFSAAEAYLVENGKIGAPVKGATLIGNGP 433
Query: 689 NILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
+ + K+SMIGND LD G+G CGK GQ VPVGVGQPT+K+ ITVGGT
Sbjct: 434 DAMSKISMIGNDTALDSGIGTCGKSGQSVPVGVGQPTVKMGGITVGGT 481
>gi|296533732|ref|ZP_06896282.1| U62 family peptidase 2 TldD [Roseomonas cervicalis ATCC 49957]
gi|296265954|gb|EFH12029.1| U62 family peptidase 2 TldD [Roseomonas cervicalis ATCC 49957]
Length = 475
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 229/443 (51%), Positives = 315/443 (71%), Gaps = 4/443 (0%)
Query: 295 ADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKS 354
+ + ++ ++E L++G +++ +F ++G G+RA++G+ + + +I+ L A +
Sbjct: 34 GELFLEYVESEAISLDDGRIRSASFDASRGFGLRAVAGEAAGYAHGGEITDAALARAAAT 93
Query: 355 TRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVI 414
S G+ ++ + LY + +S++ K LL ++ AR +DPRV
Sbjct: 94 V---RAVSAGRSGTLQAAPRATNARLYEAGNPLSAMEFPAKTALLAEIDAYARARDPRVT 150
Query: 415 KVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF 474
+V+A+LSG + + I R DG VAD+RPLV+L VTI+VE+NGRRE G+ G GGR+ Y
Sbjct: 151 QVMASLSGTWQAVQILRADGGRVADLRPLVRLNVTIVVEQNGRRESGSHGMGGRHGYARV 210
Query: 475 T-DMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKG 533
T + + V ++ AL+NL+A PAPAG M+VVLGPGWPGILLHEAIGHGLEGDFNRK
Sbjct: 211 TGEASWKGAVEEALRQALLNLDAIPAPAGEMEVVLGPGWPGILLHEAIGHGLEGDFNRKK 270
Query: 534 SSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIM 593
+SAF+ +G RIA+ +T+VD+GTL +RRGS+ +DDEG P+ TTLIE+GIL G++QD
Sbjct: 271 TSAFAGLLGSRIAAPGVTVVDDGTLPDRRGSLTVDDEGTPSGRTTLIEDGILVGFLQDRQ 330
Query: 594 NARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVD 653
NARLMN++ TGN RR+S AH P+PRMTNT ML G+ HPEEI+ SVK G+ NF GGQVD
Sbjct: 331 NARLMNVAATGNGRRQSHAHAPMPRMTNTVMLGGRHHPEEILRSVKRGILGVNFGGGQVD 390
Query: 654 ITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKD 713
IT+GKFVFS S+AY++++G+I PVKGA LIG+GP L +VSMIGNDM LDPG+G CGK
Sbjct: 391 ITSGKFVFSMSEAYLVEDGRIGAPVKGAMLIGNGPEALTRVSMIGNDMALDPGIGTCGKQ 450
Query: 714 GQMVPVGVGQPTLKIDSITVGGT 736
GQ VPVGVGQPTLK+ +T+GGT
Sbjct: 451 GQGVPVGVGQPTLKMTGLTIGGT 473
>gi|163792278|ref|ZP_02186255.1| Peptidase U62, modulator of DNA gyrase [alpha proteobacterium
BAL199]
gi|159181983|gb|EDP66492.1| Peptidase U62, modulator of DNA gyrase [alpha proteobacterium
BAL199]
Length = 477
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 229/447 (51%), Positives = 319/447 (71%), Gaps = 6/447 (1%)
Query: 292 VDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINA 351
D + Y ++ ++E+ ++G ++T +F+ QG G+RAISG+ F ++ ++S++ + A
Sbjct: 33 ADDGELYLEYRQSESLAFDDGRLRTASFNTAQGFGLRAISGEARGFAHASELSEDAICRA 92
Query: 352 VKSTRSI-ANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKD 410
+ R++ A QS + ++ LYS + + I KIK+L ++ AR KD
Sbjct: 93 ADTVRAVHAGQSGTMAEGPVGTNRL----LYSDANPLQGITTEAKIKVLTEIDAYARAKD 148
Query: 411 PRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYN 470
PRV +V A+LSG + + I R G V D+RPLV+L V+++V R E G+ GCGGR
Sbjct: 149 PRVRQVSASLSGSWQAVQILRAGGQRVGDVRPLVRLNVSVVVGDGDRMESGSYGCGGRLM 208
Query: 471 YNYFTD-MILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDF 529
++ F D + + ++ A +NL+A PAPAG M+VVLGPGWPG++LHEA+GHGLEGDF
Sbjct: 209 FDRFIDPEMWQHAADEAIRVAFVNLDAVPAPAGEMEVVLGPGWPGVMLHEAVGHGLEGDF 268
Query: 530 NRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYM 589
NRK +S FS+ IG+R+++ +T++D+GTL +RRGS+ +DDEG PT T LIE+GIL GYM
Sbjct: 269 NRKKTSTFSDMIGQRVSAPGVTVIDDGTLPDRRGSLTVDDEGTPTSRTVLIEDGILVGYM 328
Query: 590 QDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSG 649
QD NARLM+M+ TGN RRES+AH P+PRMTNT+M +G P+EI+ SVK GLYA NF+G
Sbjct: 329 QDRQNARLMDMAPTGNGRRESYAHHPMPRMTNTFMASGSADPQEILQSVKKGLYAVNFAG 388
Query: 650 GQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGV 709
GQVDIT+GKFVFS ++AY+++NGKI VKGATLIG+GP+ + K++MIGND KLD G+G
Sbjct: 389 GQVDITSGKFVFSMNEAYLVENGKIGPAVKGATLIGNGPDAMTKITMIGNDSKLDDGIGT 448
Query: 710 CGKDGQMVPVGVGQPTLKIDSITVGGT 736
CGKDGQ VPVGVGQPTLK+ ITVGGT
Sbjct: 449 CGKDGQGVPVGVGQPTLKMAGITVGGT 475
>gi|37681111|ref|NP_935720.1| Zn-dependent protease [Vibrio vulnificus YJ016]
gi|37199861|dbj|BAC95691.1| predicted Zn-dependent protease [Vibrio vulnificus YJ016]
Length = 481
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 252/481 (52%), Positives = 343/481 (71%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N LL P L + + LG++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 INQIEEALLAPGGLTAEDIAATLGSIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQS-NGKIKIIKNIKKIKINSL 380
+ GVGVRA++G+KT F YSD I + L + + R IA Q NG++ K +
Sbjct: 63 DCGVGVRAVTGEKTGFAYSDQIQLDGLKQSAIAARGIAQQGQNGQVHAFKRSEN---QHY 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y+ + ++ ++K +LL+ ++ R K+P + +V +LSG ++ +L+ DG DI
Sbjct: 120 YAAVNPLAGWEKQQKTELLKSLDAYIRTKEPLIKEVSISLSGVHEQMLVAATDGTYAGDI 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF--TDMILEKC---VSNSVNSALINLE 495
RPLV+L ++++ EK RRE G++G GGR+ Y++F + ++ ++ AL+NLE
Sbjct: 180 RPLVRLSISVLAEKGERRERGSAGGGGRFGYDFFLGDENGAQRAFHFADEAIRMALVNLE 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS FS +G+++ S TIVD+
Sbjct: 240 ADAAPAGSMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSVFSGKVGEQVTSSLCTIVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GTL + RGS+N+DDEG Q TLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 GTLKDLRGSLNVDDEGVNGQYNTLIENGVLKGYMQDKLNARLMGVNPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G+ PEEIIS+VK GLYA NF GGQVDIT+GKFVFS S+AY+I++GKIT
Sbjct: 360 MPRMTNTYMLPGQHTPEEIISTVKKGLYAPNFGGGQVDITSGKFVFSTSEAYLIEDGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G +++VSM+GND+ +D GVGVCGK GQ +PVGVGQPTLK+DSITVGG
Sbjct: 420 RPVKGATLIGSGIEAMQQVSMVGNDLSIDRGVGVCGKAGQSIPVGVGQPTLKLDSITVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|384082284|ref|ZP_09993459.1| microcin-processing peptidase 2 [gamma proteobacterium HIMB30]
Length = 479
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 238/450 (52%), Positives = 321/450 (71%), Gaps = 7/450 (1%)
Query: 290 NKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLI 349
+VD+AD +F+ + E + LE+G VK ++ + GVGVR +GDK F YS +I+ +
Sbjct: 33 GEVDFADLFFEKAEAETYSLEDGEVKDASYYQDAGVGVRTCAGDKQGFAYSSEITAARIR 92
Query: 350 NAVKSTRSIAN--QSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIAR 407
A +I + QS G + N+ ++ LY + I EKI L ++ AR
Sbjct: 93 EARDVAIAIQDGRQSRGGV----NLDQVSTPKLYVAKNPIPEKGATEKIAFLLDIDAKAR 148
Query: 408 LKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGG 467
K P V +V A LS Y ILI DG + AD+RPLV+L V+++ EK+GRRE G SG GG
Sbjct: 149 AKSPLVQQVQATLSISYREILIAATDGTLGADVRPLVRLSVSVLAEKDGRRERGGSGLGG 208
Query: 468 RYNYN-YFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLE 526
RY+ + T + VS SV+ AL+NL++ PAG M VVL GWPG+LLHEA+GHGLE
Sbjct: 209 RYDLDRLLTVEHANRLVSESVDQALVNLDSVDCPAGEMPVVLASGWPGVLLHEAVGHGLE 268
Query: 527 GDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILK 586
GDFNRKGSS +S +G+++ASK +T+VD+GT+++RRGS+NIDDEG+ +Q LIE+GIL
Sbjct: 269 GDFNRKGSSFYSGKVGQQVASKGVTVVDDGTISDRRGSLNIDDEGHVSQRNVLIEDGILV 328
Query: 587 GYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATN 646
GYMQD +NARLM+++ TGN RRES+AH+P+PRMTNT+M G E++I SV G++A N
Sbjct: 329 GYMQDKLNARLMDVAPTGNGRRESYAHLPMPRMTNTFMEPGDATQEDMIRSVDRGIFAVN 388
Query: 647 FSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPG 706
F GGQVDIT+G+FVF+AS+AY+I+ GK+T PVKGATLIGHGP ++ +SMIG+D+ LDPG
Sbjct: 389 FGGGQVDITSGQFVFAASEAYLIEKGKVTAPVKGATLIGHGPEVMSAISMIGDDLALDPG 448
Query: 707 VGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
+GVCGK+GQ VPVGVGQP+LKID +TVGGT
Sbjct: 449 IGVCGKNGQSVPVGVGQPSLKIDRLTVGGT 478
>gi|323496112|ref|ZP_08101172.1| hypothetical protein VISI1226_19529 [Vibrio sinaloensis DSM 21326]
gi|323318856|gb|EGA71807.1| hypothetical protein VISI1226_19529 [Vibrio sinaloensis DSM 21326]
Length = 481
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 249/481 (51%), Positives = 341/481 (70%), Gaps = 7/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N LL L E+ + L +M ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 INHVEDALLGAAGLTEQDVADTLASMATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
+ GVGVRA++G+KT F YSD I L + + R IA +G+ ++ K+ ++Y
Sbjct: 63 DCGVGVRAVTGEKTGFAYSDQIQLEGLKQSAIAARGIAQ--HGQNATVQAFKRTDNQTIY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ ++S +K +LL+ ++ R K+P V +V ++SG ++ +L+ DG D+R
Sbjct: 121 DAVNPLASWEKVQKTQLLKELDAYIRTKEPLVKEVSISISGVHEQMLVAATDGTYAGDVR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTD-----MILEKCVSNSVNSALINLEA 496
PLV+L ++++ ++ RRE G++G GGR+ Y++F + ++ ALINLEA
Sbjct: 181 PLVRLSISVLAQRGDRRERGSAGGGGRFGYDFFLSENDGVKVAYHFADEAIRMALINLEA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRK SS FS +G+++ S+ TIVD+G
Sbjct: 241 DAAPAGAMPVVLGSGWPGVLLHEAVGHGLEGDFNRKESSVFSGKVGEKVTSELCTIVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL + RGS+N+DDEG Q TLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P+
Sbjct: 301 TLKDLRGSLNVDDEGVVGQYNTLIENGVLKGYMQDKLNARLMGVNPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ PEEIIS+VK GLYA NF GGQVDIT+GKFVFSAS+AY+I++GKIT
Sbjct: 361 PRMTNTYMLPGQHTPEEIISTVKKGLYAPNFGGGQVDITSGKFVFSASEAYLIEDGKITR 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G +++VSM+GND+ +D GVGVCGK GQ VPVGVGQPTLK+DS+TVGGT
Sbjct: 421 PVKGATLIGSGIEAMQQVSMVGNDLSIDRGVGVCGKAGQSVPVGVGQPTLKLDSLTVGGT 480
Query: 737 N 737
Sbjct: 481 E 481
>gi|254472078|ref|ZP_05085479.1| TldD protein, suppresses inhibitory activity of CsrA [Pseudovibrio
sp. JE062]
gi|374329896|ref|YP_005080080.1| tldd protein [Pseudovibrio sp. FO-BEG1]
gi|211959280|gb|EEA94479.1| TldD protein, suppresses inhibitory activity of CsrA [Pseudovibrio
sp. JE062]
gi|359342684|gb|AEV36058.1| tldd protein [Pseudovibrio sp. FO-BEG1]
Length = 474
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 235/469 (50%), Positives = 324/469 (69%), Gaps = 5/469 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL+ LDE+ +I K D + Y ++++NE + + G +K+ +FS QG G+R
Sbjct: 8 LLQTSGLDEETARQITAAALKG-ADDGELYLEYSQNEGLVFDNGRLKSSSFSTGQGFGLR 66
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+ G+ + + +SDDIS+ L A + S+ + +G K LY+ + I
Sbjct: 67 AVVGEASGYAHSDDISEAALKRAADAVASVQSGHSGTYAAPPTRTNQK---LYTDENPIG 123
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
S EK++LL+ ++ AR KDPRV +V +L+G + + I R DG + D+RPLV+L V
Sbjct: 124 SPTFAEKVQLLQEIDAYARAKDPRVQQVTVSLAGSWKTVDILRADGHRIRDVRPLVRLNV 183
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
+I+ ++E G+ G GGR + F + + V ++ AL+NLEA PAPAG VV
Sbjct: 184 SIVAGDGDKQESGSYGSGGREGFGEFVAETSWQHAVDEALRQALVNLEAIPAPAGTFDVV 243
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LG GWPGILLHEA+GHGLEGDFNRK +SAF+ +G+++A+K +TIVD+GT+A RRGS+++
Sbjct: 244 LGNGWPGILLHEAVGHGLEGDFNRKKTSAFAGLMGQQVAAKGVTIVDDGTIAKRRGSLSV 303
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PT TTLIE+GIL GYMQD NARLM + TGN RRESF+H P+PRMTNT M G
Sbjct: 304 DDEGTPTGRTTLIEDGILVGYMQDRQNARLMGVEPTGNGRRESFSHQPLPRMTNTIMEAG 363
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
P+EII S+++G+YA +F GGQVDIT+GKFVFS ++AY ++NGKI PVKGA LIG+G
Sbjct: 364 DKDPKEIIESLEDGIYAVSFGGGQVDITSGKFVFSCTEAYRVQNGKIGAPVKGAMLIGNG 423
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+ L +VSMIGND+KLDPG+G CGK GQ VPVGVGQPT++I+ +T+GGT
Sbjct: 424 PDALTRVSMIGNDLKLDPGIGTCGKAGQGVPVGVGQPTMRINEMTIGGT 472
>gi|422348668|ref|ZP_16429560.1| hypothetical protein HMPREF9465_00450 [Sutterella wadsworthensis
2_1_59BFAA]
gi|404659012|gb|EKB31873.1| hypothetical protein HMPREF9465_00450 [Sutterella wadsworthensis
2_1_59BFAA]
Length = 493
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 234/483 (48%), Positives = 328/483 (67%), Gaps = 3/483 (0%)
Query: 257 KNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKT 316
++ L+ A+++ LD+ LLK+LG M D+AD Y Q T + +WIL+EG VKT
Sbjct: 6 SSLERLSAAQALFYSGTGLDDGALLKVLGRMTPAGADWADIYLQQTVSRSWILDEGAVKT 65
Query: 317 GNFSINQGVGVRAISGDKTAFFYSDDISKNTLINA---VKSTRSIANQSNGKIKIIKNIK 373
G FSI++G G+R + G+ + Y+D ++ +L++A V ++ + + + + I +
Sbjct: 66 GGFSIDRGAGLRTVCGETSTLAYTDVLTPVSLLDAAGTVVASAAYSPEGAPGVVIPACLT 125
Query: 374 KIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRND 433
D S+++ + ++L+ + +AR DPRV V+ L E D L+ R D
Sbjct: 126 PGSYRPCCGTEDASSNMHTPQALELIREADALAREADPRVTDVVVTLQCETDATLLCRLD 185
Query: 434 GLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALIN 493
GL+ DIRP+V L +++I +NGRRE ++G G R +FT + K ++V+ A+ N
Sbjct: 186 GLLSGDIRPMVYLSISVIASENGRRERASAGGGARAGLEFFTRERIRKWARDAVSEAIHN 245
Query: 494 LEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIV 553
L A PAPAGIM VVLGPGWPGILLHEA+GHGLEGDF RKG+SAF+ IG R+AS +T+V
Sbjct: 246 LGAAPAPAGIMPVVLGPGWPGILLHEAVGHGLEGDFIRKGTSAFTGRIGMRVASPGVTVV 305
Query: 554 DNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAH 613
D+GT+ RGSI DDEG P TTLIE+GIL GYM D+ +AR++ + TGN RRESFA
Sbjct: 306 DDGTIGLARGSICADDEGTPAARTTLIEDGILTGYMHDLTSARVLGTAPTGNGRRESFAT 365
Query: 614 IPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGK 673
+P+PRMTNT+M G P +I+ SVK G+YA+NFSGGQVDITNGKFVF+ S+A++I++G+
Sbjct: 366 LPLPRMTNTFMTPGDCDPADIVKSVKRGIYASNFSGGQVDITNGKFVFAMSRAWMIEDGR 425
Query: 674 ITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITV 733
+T+PV+GA L G GP LK + +IGND+ LD G G CGKDGQ VPVGVG PT++ID++TV
Sbjct: 426 LTHPVRGAMLSGSGPEALKHIPLIGNDLALDEGTGQCGKDGQQVPVGVGMPTIRIDALTV 485
Query: 734 GGT 736
GGT
Sbjct: 486 GGT 488
>gi|118590721|ref|ZP_01548122.1| tldd protein [Stappia aggregata IAM 12614]
gi|118436697|gb|EAV43337.1| tldd protein [Stappia aggregata IAM 12614]
Length = 474
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 227/476 (47%), Positives = 331/476 (69%), Gaps = 5/476 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+ ++ + L+E L + +I + + D + + ++ ++E + + G +K N+
Sbjct: 1 MTLSTTDLIESSGLGLETARRITQDAL-DGADDGELFVEYRQSEGLVFDNGRLKGANYDT 59
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QG G+RA++G+ + ++ DIS+ L A + ++ +G +LY
Sbjct: 60 VQGFGLRAVAGEAAGYAHAGDISEGALKRAADAVSAVKKGYSGSYAAAPARTN---QTLY 116
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + + +K+KLL+ ++ AR KDPRV +V A+L+G + V+ I R DG +V D+R
Sbjct: 117 TDANPLGGPSFEDKVKLLQEIDAYARAKDPRVRQVSASLAGSWQVVEILRADGHLVRDVR 176
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAP 500
P+V+L ++++ + R+E G+ GCGGR + F T + V ++ AL+NLEA PAP
Sbjct: 177 PMVRLSISVVAGNDDRQENGSFGCGGREGFERFITTENWQGGVDEALRQALVNLEAVPAP 236
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG VVLGPGWPGILLHEA+GHGLEGDFNRK +SAF+ +G+R+AS +TIVD+GT+A+
Sbjct: 237 AGTFDVVLGPGWPGILLHEAVGHGLEGDFNRKKTSAFAGLMGQRVASPGVTIVDDGTIAD 296
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+ +DDEG P+ T LIE+GILKGYMQD NARLM M TGN RR+S+AHIP+PRMT
Sbjct: 297 RRGSLTVDDEGTPSSRTVLIEDGILKGYMQDRQNARLMGMEPTGNGRRQSYAHIPMPRMT 356
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NT M+ G P+EI++SVK+G+YA +F GGQVDIT+GKFVFS ++AY ++NGK+ P+KG
Sbjct: 357 NTVMMAGDKDPDEILASVKDGIYAVSFGGGQVDITSGKFVFSCTEAYRVQNGKVGAPLKG 416
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
A LIG+GP+ L +VSMIGNDMKLDPG+G CGK GQ VPVGVGQP+++I+++T+GGT
Sbjct: 417 AMLIGNGPDALTRVSMIGNDMKLDPGMGTCGKQGQGVPVGVGQPSMRINAMTIGGT 472
>gi|251773058|gb|EES53614.1| peptidase U62, modulator of DNA gyrase [Leptospirillum
ferrodiazotrophum]
Length = 478
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 234/451 (51%), Positives = 315/451 (69%), Gaps = 1/451 (0%)
Query: 288 FKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNT 347
+ VD AD YF+ T E++ +E+G+VK ++QGVG R +SG++T F ++++ S
Sbjct: 28 LPSTVDDADLYFEHTVREHYSVEDGMVKKAGQEVSQGVGARIVSGERTGFAFTEEFSPRQ 87
Query: 348 LINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIAR 407
+ A++S R IA + + LY TD + EKI +LE ++++ R
Sbjct: 88 IAEALESARRIAQGPASGRPLALSRPGRPGRDLYPTTDLAFDRPVPEKIGILETIDRLCR 147
Query: 408 LKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGG 467
+ +V++V+A+L+ E I I R+DG +V D PL +L V++I ++ R+ G+ G GG
Sbjct: 148 QESSKVVQVMASLAFEDKTIQIVRSDGQVVVDRIPLTRLNVSVIAQEGSNRQTGSYGWGG 207
Query: 468 RYNYN-YFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLE 526
R +++ + L + +V AL+NLEA+P P+G M VVLGPGWPGILLHEAIGHGLE
Sbjct: 208 RTDFSGIVSPERLAQACREAVRQALVNLEARPCPSGTMDVVLGPGWPGILLHEAIGHGLE 267
Query: 527 GDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILK 586
GDFNRKG+SAFS IG+R+AS TIVD+GTL RRGS+N+DDEG PTQ T LIENGIL+
Sbjct: 268 GDFNRKGTSAFSGRIGQRVASPLCTIVDDGTLPGRRGSLNVDDEGTPTQRTVLIENGILR 327
Query: 587 GYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATN 646
GY+QD NARLM TGN RRES+AH +PRMTNT ML G+ P E++SS+ G+YA N
Sbjct: 328 GYLQDRQNARLMGTRSTGNGRRESYAHPVMPRMTNTVMLPGESDPAEVLSSLDRGIYAVN 387
Query: 647 FSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPG 706
F GGQVDIT+GKFVFS S+AY ++ GKI +PVKGATLIG+GP++L KV M+G DM LD G
Sbjct: 388 FGGGQVDITSGKFVFSMSEAYYVEKGKILHPVKGATLIGNGPDVLTKVRMVGTDMSLDTG 447
Query: 707 VGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
VG CGKDGQ VPVGVG PT+++D +TVGGT+
Sbjct: 448 VGTCGKDGQSVPVGVGLPTIRVDGLTVGGTH 478
>gi|27904849|ref|NP_777975.1| TldD protein [Buchnera aphidicola str. Bp (Baizongia pistaciae)]
gi|38605257|sp|Q89AE1.1|TLDD_BUCBP RecName: Full=Protein TldD homolog
gi|27904247|gb|AAO27080.1| TldD protein [Buchnera aphidicola str. Bp (Baizongia pistaciae)]
Length = 483
Score = 483 bits (1244), Expect = e-133, Method: Compositional matrix adjust.
Identities = 246/477 (51%), Positives = 345/477 (72%), Gaps = 13/477 (2%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL D++ + + IL ++ + K+DY+D YFQ +E+WILE I+K G ++INQGVGVR
Sbjct: 10 LLFKNDINYQNVFSILSDILEKKIDYSDIYFQSIIHESWILENSIIKEGTYNINQGVGVR 69
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNI---KKIKINSLYSFTD 385
+ GDKT+F YS+DI+ N+LI++ K SI + I KN+ + +Y+ +
Sbjct: 70 IVLGDKTSFSYSNDITFNSLISSSKLAMSILDVK----AITKNVCPLTTTRTKPIYTSCN 125
Query: 386 TISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQ 445
++SI+ ++K+++L R+ +A+ D RV+ V A LS YD +LI +DG + ADIRPL++
Sbjct: 126 PLTSIDTQKKLEILNRINCVAKNYDHRVVSVNAELSSSYDEVLIATSDGNLAADIRPLIR 185
Query: 446 LFVTIIVEKNGRREIGNSGCGGRYNYNYFTD------MILEKCVSNSVNSALINLEAKPA 499
L + ++V G+ E G SG G R Y++F + ++ E + ALINL A+ A
Sbjct: 186 LSINVLVNDKGKFERGVSGGGSRSGYSFFLNKHKSGKILAEYYACEAARIALINLSAQEA 245
Query: 500 PAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLA 559
P+G VVLG GWPG+LLHEA+GHGLEGDFNR+G+S F+N IG+++AS+ TIVD+GTL
Sbjct: 246 PSGTFPVVLGSGWPGVLLHEAVGHGLEGDFNRQGTSVFANKIGRQVASELCTIVDDGTLK 305
Query: 560 NRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRM 619
+RRGS+ IDDEG P Q LI+NGILK Y+QD NARLM M +TGN RRES+AH+P+PRM
Sbjct: 306 DRRGSLTIDDEGTPGQYNILIKNGILKKYLQDKTNARLMEMDLTGNGRRESYAHLPLPRM 365
Query: 620 TNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVK 679
TNTYML+G F+P+EII S+ G+YA NFSGGQVDIT+GKFVFS S+AY+IK GKI +K
Sbjct: 366 TNTYMLSGPFNPKEIICSIDYGIYALNFSGGQVDITSGKFVFSTSEAYLIKQGKIGKSIK 425
Query: 680 GATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
TLIG G +++K++SM+GND+K+D GVG+C K+GQ +PVGVGQPT+K++++TVGGT
Sbjct: 426 NVTLIGSGIDVMKEISMVGNDLKIDEGVGICVKNGQSIPVGVGQPTIKLNNLTVGGT 482
>gi|393720352|ref|ZP_10340279.1| C69 family peptidase [Sphingomonas echinoides ATCC 14820]
Length = 476
Score = 483 bits (1244), Expect = e-133, Method: Compositional matrix adjust.
Identities = 229/448 (51%), Positives = 318/448 (70%), Gaps = 5/448 (1%)
Query: 290 NKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLI 349
K D + Y Q+ K+E + ++G +KT ++ + G G+RA+SG+ TAF +++++S +
Sbjct: 31 GKADDGELYLQYRKSEAFGFDDGRLKTASYDTHSGFGLRAVSGEMTAFAHANELSAAAIR 90
Query: 350 NAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLK 409
A ++ I S K ++ + LY+ D + I +K+ L + ++ AR +
Sbjct: 91 RASETMALIDPSSAPKAGPPRSTNR----HLYTAADPLDLIPFADKVTLCQTIDAAARAR 146
Query: 410 DPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRY 469
DPRV +V +L G ++V+ I R DG + D+RPLV+L V+I+VE+NGRRE GN G GGRY
Sbjct: 147 DPRVAQVSVSLMGNWNVVEIVRADGFVATDVRPLVRLNVSIVVEQNGRRETGNFGMGGRY 206
Query: 470 NYNYFTD-MILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGD 528
Y + + + +++ AL+NL+A APAG M V+LGPGWPGILLHEAIGHGLEGD
Sbjct: 207 LYTELMEPATWNRAIDQALSQALVNLDAVAAPAGEMTVLLGPGWPGILLHEAIGHGLEGD 266
Query: 529 FNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGY 588
FNRKG+SAFS IG+R+A+ +T+VD+G++A+RRGS++IDDEG PTQ LIE+GILKGY
Sbjct: 267 FNRKGTSAFSGRIGERVAAPGVTVVDDGSIADRRGSLSIDDEGTPTQENVLIEDGILKGY 326
Query: 589 MQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFS 648
+QD +NARLM ++ TGN RRESFAH P+PRMTNT+M G P E++S VKNG++A +F
Sbjct: 327 IQDRLNARLMGVAPTGNGRRESFAHAPMPRMTNTFMRGGSDDPAELLSRVKNGIFAKSFG 386
Query: 649 GGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVG 708
GGQVDI +GKFVFS ++AY+++NGK+ P+KGATLIG GP+ L +V IGND LD GVG
Sbjct: 387 GGQVDIVSGKFVFSCTEAYLVENGKLGAPIKGATLIGDGPSCLTRVEGIGNDFALDEGVG 446
Query: 709 VCGKDGQMVPVGVGQPTLKIDSITVGGT 736
+CGK GQ VP GVGQPTL + +TVGGT
Sbjct: 447 MCGKGGQSVPAGVGQPTLLVGGLTVGGT 474
>gi|296114377|ref|ZP_06833031.1| peptidase U62 modulator of DNA gyrase [Gluconacetobacter hansenii
ATCC 23769]
gi|295979138|gb|EFG85862.1| peptidase U62 modulator of DNA gyrase [Gluconacetobacter hansenii
ATCC 23769]
Length = 485
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 230/478 (48%), Positives = 323/478 (67%), Gaps = 15/478 (3%)
Query: 258 NIHPLNIARSILLEPFDL------DEKILLKILGNMFKNKVDYADFYFQFTKNENWILEE 311
+ PL S+ E D E+++ + L M D + + ++ ++E L+E
Sbjct: 6 TLSPLATTDSLFFERADARLGRTEAERLVAQALAGM-----DDGELFLEYRESEVISLDE 60
Query: 312 GIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKN 371
G++++ F + G G+RA+ +T F +SDDIS++ + A ++ I +G + +
Sbjct: 61 GVIRSATFDTSSGFGLRAVMDQETGFAHSDDISESAIRRASETVTQIRAGRSGTLAVGPQ 120
Query: 372 IKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITR 431
+ LY + + + + LL ++ AR +DPRV++V+A+LS ++ + I R
Sbjct: 121 ATN---HRLYPTLNPLGETDFATRAALLSELDAYARARDPRVVQVMASLSAQWQAVQIIR 177
Query: 432 NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEK-CVSNSVNSA 490
DG VADIRPLV++ V+++VEK+GRRE G G GGRY Y D + K V ++ A
Sbjct: 178 PDGQRVADIRPLVRMNVSVVVEKDGRRESGGHGLGGRYAYTRLLDATVWKSAVDEALRMA 237
Query: 491 LINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEI 550
L+NL+A PAPAG M+VVLG GWPGILLHEA+GHGLEGDFNRKG+SAF+ +G+R+A+ +
Sbjct: 238 LVNLDAAPAPAGEMEVVLGAGWPGILLHEAVGHGLEGDFNRKGTSAFAGLMGQRVAAPGV 297
Query: 551 TIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRES 610
T+VD+GTL RRGS+ +DDEG PT T +IE+GIL GY+QD +NARLM + TGN RRES
Sbjct: 298 TVVDDGTLPERRGSLTVDDEGTPTGRTVMIEDGILTGYLQDRLNARLMGVRPTGNGRRES 357
Query: 611 FAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIK 670
+AH P+PRMTNT ML G E++I + K GLYA NF GGQVDIT+GKFVF+AS+AY+I+
Sbjct: 358 YAHAPLPRMTNTIMLGGDATTEDMIRTTKRGLYAVNFGGGQVDITSGKFVFAASEAYLIE 417
Query: 671 NGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKI 728
+GKIT PV+GATLIG+G + + KV+MIG + LDPG+G CGK GQ VPVGVGQPTLK+
Sbjct: 418 DGKITTPVRGATLIGNGADAMTKVTMIGQEPALDPGIGTCGKSGQGVPVGVGQPTLKM 475
>gi|444429030|ref|ZP_21224299.1| hypothetical protein B878_23503 [Vibrio campbellii CAIM 519 = NBRC
15631]
gi|444237744|gb|ELU49408.1| hypothetical protein B878_23503 [Vibrio campbellii CAIM 519 = NBRC
15631]
Length = 481
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 254/481 (52%), Positives = 344/481 (71%), Gaps = 9/481 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N LL P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 INQIEQALLAPNGLTEQDIADTLASIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQ-SNGKIKIIKNIKKIKINSL 380
+ GVGVRA+ G+KT F YSD I + L + + R IA Q NGK+ K +
Sbjct: 63 DCGVGVRAVIGEKTGFAYSDQIQLDGLKQSAIAARGIAQQGQNGKVHAFKRSDN---QAY 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y + ++S ++K +LL ++ R K+P + +V ++SG ++ +L+ DG DI
Sbjct: 120 YDAVNPLASWEKQQKTELLLSLDAYIRTKEPLIKEVSISISGVHEQMLVAATDGTYAGDI 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF---TDMILE--KCVSNSVNSALINLE 495
RPLV+L ++++ EK RRE G++G GGR+ Y++F T+ + + + ++ AL+NLE
Sbjct: 180 RPLVRLSISVLAEKGDRRERGSAGGGGRFGYDFFLSETNGVKQAFQFADEAIRMALVNLE 239
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A+ APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS FS +G+++ S TIVD+
Sbjct: 240 AEAAPAGMMPVVLGSGWPGVLLHEAVGHGLEGDFNRKESSVFSGKMGEQVTSPLCTIVDD 299
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
TL + RGS+N+DDEG Q TLIENG+LKGYMQD +NARLM ++ TGN RRES+AH+P
Sbjct: 300 CTLKDLRGSLNVDDEGVNGQYNTLIENGVLKGYMQDKLNARLMGVNPTGNGRRESYAHLP 359
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYML G+ PEEIIS+VK GLYA NF GGQVDIT+GKFVFSAS+AY+I++GKIT
Sbjct: 360 MPRMTNTYMLPGEHTPEEIISTVKKGLYAPNFGGGQVDITSGKFVFSASEAYLIEDGKIT 419
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATLIG G +++VSM+GND+ +D GVGVCGK GQ VPVGVGQPTLK+DSITVGG
Sbjct: 420 RPVKGATLIGSGIEAMQQVSMVGNDLSIDRGVGVCGKAGQSVPVGVGQPTLKLDSITVGG 479
Query: 736 T 736
T
Sbjct: 480 T 480
>gi|340776641|ref|ZP_08696584.1| peptidase U62 modulator of DNA gyrase [Acetobacter aceti NBRC
14818]
Length = 504
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 221/443 (49%), Positives = 328/443 (74%), Gaps = 4/443 (0%)
Query: 295 ADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKS 354
+ + ++ ++E L++G++++ +F + G G+R++ G++T F +SD+IS ++L A ++
Sbjct: 63 GELFLEYRESEGLALDDGVIRSASFDTSSGFGLRSVLGEETGFAHSDEISTSSLRRAAET 122
Query: 355 TRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVI 414
++ NG+ I+ + LYS + + + + LL +++ AR KD RV+
Sbjct: 123 VSAV---RNGRSGIMAPPPRSTNTRLYSDNNPLHETDFARRAALLGQIDAYARGKDSRVV 179
Query: 415 KVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYN-Y 473
+V+A+++ E+ + I R DGL VADIRPLV+L ++++VEK+GRRE G G GGRY+
Sbjct: 180 QVMASIASEWQAVQIIRADGLRVADIRPLVRLNISVVVEKDGRRESGTYGFGGRYSVTKL 239
Query: 474 FTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKG 533
+ + V+ ++ +ALINL+A+PAPAG M++VLG GWPGILLHEA+GHGLEGDFNRK
Sbjct: 240 LEESAWQHGVNEALRTALINLDARPAPAGEMEIVLGSGWPGILLHEAVGHGLEGDFNRKK 299
Query: 534 SSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIM 593
+S FS+ +GKR+AS +T+VD+GTL +RRGS+ +DDEG P+ T +IE+GIL G++QD +
Sbjct: 300 TSMFSDLMGKRVASPGVTVVDDGTLPDRRGSLTVDDEGTPSGRTVMIEDGILTGFIQDRL 359
Query: 594 NARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVD 653
NARLM+++ TGN RR+S+ ++P+PRMTNT ML G+ +++I SVK GLYA NF GGQVD
Sbjct: 360 NARLMDVAPTGNGRRQSYGYMPLPRMTNTLMLAGQASTDDMIRSVKRGLYAVNFGGGQVD 419
Query: 654 ITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKD 713
IT+GKFVF+AS+AY+I++GK+T PVKGATLIG+G + + +SMIG+D+ LDPG+G CGK
Sbjct: 420 ITSGKFVFAASEAYMIEDGKVTAPVKGATLIGNGADAMTSISMIGSDVALDPGIGTCGKA 479
Query: 714 GQMVPVGVGQPTLKIDSITVGGT 736
GQ VPVGVGQPTLK+ +TVGGT
Sbjct: 480 GQGVPVGVGQPTLKMTGLTVGGT 502
>gi|58039565|ref|YP_191529.1| TldD protein [Gluconobacter oxydans 621H]
gi|58001979|gb|AAW60873.1| TldD protein [Gluconobacter oxydans 621H]
Length = 487
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 233/458 (50%), Positives = 320/458 (69%), Gaps = 6/458 (1%)
Query: 282 KILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSD 341
+ L N + VD + + ++ +NE+ L++G +++ +F+ + G G+RA+ G +TAF ++D
Sbjct: 32 RALVNQGLDGVDDGELFLEYRENESISLDDGTIRSASFNTSSGFGLRAVLGTETAFAHAD 91
Query: 342 DISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLER 401
DIS++ L AV + ++ G+ I+ + LY + + + + +L
Sbjct: 92 DISRDALERAVSTVGAV---RQGRSGIMAPGPQATNRRLYGDSRPLEGTDFAARAAVLSE 148
Query: 402 VEKIARLKDPRVIKVIANLSGEYDVILITR--NDGLIVADIRPLVQLFVTIIVEKNGRRE 459
++ AR D RV++V A LS E+ + I R + G VAD+RPLV++ V+++VEK+G+RE
Sbjct: 149 IDAYARGLDSRVVQVSAVLSSEWQAVQIMRRADSGGDVADLRPLVRMNVSVVVEKDGQRE 208
Query: 460 IGNSGCGGRYNYN-YFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLH 518
G+ G GGRY + V ++ ALI LEA PAPAG M VVLGPGWPGILLH
Sbjct: 209 SGSCGLGGRYELDRLLAPETWRDAVDKALKQALITLEAAPAPAGEMDVVLGPGWPGILLH 268
Query: 519 EAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTT 578
EA+GHGLEGDFNRKG+S+FS IGKR+AS +T+VD+GTL RRGS+++DDEG PT T
Sbjct: 269 EAVGHGLEGDFNRKGTSSFSGMIGKRVASPGVTVVDDGTLPERRGSLSVDDEGTPTSRTV 328
Query: 579 LIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSV 638
LIE+GIL GY+QD +NARLM TGN RRES+AH P+PRMTNT ML G +E+I S+
Sbjct: 329 LIEDGILTGYLQDRLNARLMGTKSTGNGRRESYAHAPMPRMTNTLMLEGSATTDEMIRSM 388
Query: 639 KNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIG 698
K GLYA NF GGQVDIT+GKFVF+AS+AY++++GKI PVKGATLIG+G + + ++SMIG
Sbjct: 389 KRGLYAVNFGGGQVDITSGKFVFAASEAYLVEDGKIIRPVKGATLIGNGADAMNQISMIG 448
Query: 699 NDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
+D+ LDPG+G CGK GQ VPVGVGQPTLKI +TVGGT
Sbjct: 449 SDVALDPGIGTCGKAGQGVPVGVGQPTLKISGLTVGGT 486
>gi|347761134|ref|YP_004868695.1| DNA gyrase modulator [Gluconacetobacter xylinus NBRC 3288]
gi|347580104|dbj|BAK84325.1| DNA gyrase modulator [Gluconacetobacter xylinus NBRC 3288]
Length = 512
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 230/494 (46%), Positives = 332/494 (67%), Gaps = 15/494 (3%)
Query: 242 STIINQVKNCILISQKNIHPLNIARSILLEPFDL------DEKILLKILGNMFKNKVDYA 295
S +N+ ++ + S + + PL ++ E + E+++ + L M D
Sbjct: 17 SCSVNRSRHFMPSSLQGLTPLAATDALFFERAGVRLGRPDAERLVNQALTGM-----DDG 71
Query: 296 DFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKST 355
+ + ++ ++E L+EG++++ F + G G+RA+ ++T F +SD+IS+N + A ++
Sbjct: 72 ELFLEYRESEAISLDEGVIRSATFDTSSGFGLRAVLEEETGFAHSDEISENAIRRAAETV 131
Query: 356 RSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIK 415
I G+ + + + LY + + + +L ++ AR +DPRV++
Sbjct: 132 TQI---RAGRSGTLAAGPRATNHRLYPDINPLGEGTFASRAAMLSELDAYARARDPRVVQ 188
Query: 416 VIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYN-YF 474
V+A+LS E+ + I R DG +ADIRPLV++ V+++VE +GRRE G G GGRY Y
Sbjct: 189 VMASLSAEWQAVQIIRPDGQRMADIRPLVRMNVSVVVEHDGRRESGGHGLGGRYAYTRLL 248
Query: 475 TDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGS 534
+ + V ++ AL+NLEA+PAPAG M+VVLG GWPGILLHEA+GHGLEGDFNRKG+
Sbjct: 249 APQVWQGAVDEALRMALVNLEARPAPAGEMEVVLGAGWPGILLHEAVGHGLEGDFNRKGT 308
Query: 535 SAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMN 594
SAF+ +GKR+A+ +T+VD+GTL RRGS+ IDDEG PT T +IE+GIL GY+QD +N
Sbjct: 309 SAFAGLMGKRVAAAGVTVVDDGTLPERRGSLTIDDEGTPTSRTVMIEDGILTGYLQDRLN 368
Query: 595 ARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDI 654
ARLM + TGN RR+S+AH P+PRMTNT ML G E++I S K GLYA NF GGQVDI
Sbjct: 369 ARLMGVPTTGNGRRQSYAHAPMPRMTNTIMLGGDATTEDMIRSTKRGLYAVNFGGGQVDI 428
Query: 655 TNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDG 714
T+GKFVF+AS+AY+I++GK+TYPV+GATLIG+G + + KV+MIG + LDPG+G CGK G
Sbjct: 429 TSGKFVFAASEAYMIEDGKVTYPVRGATLIGNGADAMTKVTMIGGEPALDPGIGTCGKSG 488
Query: 715 QMVPVGVGQPTLKI 728
Q VPVGVGQPTLK+
Sbjct: 489 QGVPVGVGQPTLKM 502
>gi|397676779|ref|YP_006518317.1| peptidase U62 modulator of DNA gyrase [Zymomonas mobilis subsp.
mobilis ATCC 29191]
gi|395397468|gb|AFN56795.1| peptidase U62 modulator of DNA gyrase [Zymomonas mobilis subsp.
mobilis ATCC 29191]
Length = 480
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 236/472 (50%), Positives = 324/472 (68%), Gaps = 11/472 (2%)
Query: 266 RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGV 325
R LL P D K L + + D + Y Q++ +E++ ++G +K ++ G
Sbjct: 16 RPGLLTPDDA------KRLTSQTLHGCDDGELYLQYSVSESFSFDDGRLKNASYDNQAGF 69
Query: 326 GVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTD 385
G+R +SG+ TAF ++ +IS + + A ++ + + Q + + LY+ +
Sbjct: 70 GLRGLSGEATAFAHASEISADAIRRAGETLQLLDPQKGNHPSSPLHTNR----HLYTEAN 125
Query: 386 TISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQ 445
++ EK+ L ++++ AR +DP V +V LS + VI I R DG + DIRPLV+
Sbjct: 126 PLTLKPFAEKVALCQKIDAAARARDPHVCQVSVGLSASWSVIEIVRPDGFVAQDIRPLVR 185
Query: 446 LFVTIIVEKNGRREIGNSGCGGRYNYN-YFTDMILEKCVSNSVNSALINLEAKPAPAGIM 504
L ++++VEKNGRRE G G GGRY Y+ F + +K + ++ SAL+NLEA PAPAG M
Sbjct: 186 LNISVVVEKNGRRESGFHGFGGRYLYDPLFEESAWQKGIDMALASALVNLEAIPAPAGEM 245
Query: 505 KVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGS 564
VVLGPGWPG+LLHEA+GHGLEGDFNRKGSS FS IG+++AS+ +T++D+G++ NRRGS
Sbjct: 246 PVVLGPGWPGVLLHEAVGHGLEGDFNRKGSSVFSGRIGEKVASEGVTVIDDGSIPNRRGS 305
Query: 565 INIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYM 624
++IDDEG PT T LIENGILK YMQD +NARLM M TGN RRES+ H PIPRMTNT+M
Sbjct: 306 LSIDDEGTPTSRTVLIENGILKSYMQDRLNARLMGMKPTGNGRRESYVHAPIPRMTNTFM 365
Query: 625 LNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLI 684
G+ P EI+S VK G++A NF GGQVDIT+GKFVFS ++AY+I+NG+I P+KGATLI
Sbjct: 366 AAGQDDPAEIMSRVKKGIFAKNFGGGQVDITSGKFVFSCTEAYMIENGRIAAPIKGATLI 425
Query: 685 GHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
G GP +L K++ IGND+ LD GVG+CGK GQ VP GVGQPTL ++ +TVGGT
Sbjct: 426 GDGPTVLNKIAAIGNDLALDEGVGICGKGGQSVPAGVGQPTLLVEGLTVGGT 477
>gi|145638048|ref|ZP_01793675.1| TldD [Haemophilus influenzae PittHH]
gi|145268757|gb|EDK08733.1| TldD [Haemophilus influenzae PittHH]
Length = 430
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 232/430 (53%), Positives = 315/430 (73%), Gaps = 5/430 (1%)
Query: 313 IVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNI 372
++K G F I++GVGVRA+SG+KT F Y+D I+ +L ++ + IA G +
Sbjct: 1 MIKEGGFHIDRGVGVRAVSGEKTGFAYADQINLASLQQCAEAVKGIAQVKQGNLISPSAF 60
Query: 373 KKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRN 432
+ + Y+ + + S+ +KI+LL V++ AR +D RV KV+A+LS Y+ +LI
Sbjct: 61 NVVNPIARYAAINPLESLTKEKKIELLHLVDRTARAEDHRVTKVLASLSSVYEEVLIMAT 120
Query: 433 DGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSV 487
DG + ADIRPLV+L ++++VE+NG+RE G+ G GGR+ ++F D+ E +V
Sbjct: 121 DGTLAADIRPLVRLSISVLVEENGKRERGSCGSGGRFGLDWFFEVVDGDIRAELFAKEAV 180
Query: 488 NSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIAS 547
AL+NL A APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS F+ IG+++ S
Sbjct: 181 RQALVNLSAVAAPAGLMPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSLFTGKIGEQVTS 240
Query: 548 KEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNAR 607
TIVD+GT+ NRRGS+ IDDEG P+QC LI++GIL+GYMQD MNARLM ++ TGN R
Sbjct: 241 PLCTIVDDGTIENRRGSLTIDDEGVPSQCNVLIKDGILQGYMQDKMNARLMGVTPTGNGR 300
Query: 608 RESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAY 667
RES+AH+P+PRMTNTYML G+ +++I+SV+ G+YA +F GGQVDIT+GKFVFS S+AY
Sbjct: 301 RESYAHLPMPRMTNTYMLAGQSQFDDLIASVEQGIYAPHFGGGQVDITSGKFVFSTSEAY 360
Query: 668 IIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLK 727
+I+ GKIT PVKGATLIG G +++K+SM+ + +LD G+GVCGK+GQ VPVGVGQP LK
Sbjct: 361 LIEKGKITKPVKGATLIGSGIEVMQKISMVADKSELDLGIGVCGKEGQSVPVGVGQPALK 420
Query: 728 IDSITVGGTN 737
ID ITVGGTN
Sbjct: 421 IDEITVGGTN 430
>gi|347753747|ref|YP_004861311.1| microcin-processing peptidase 2 [Candidatus Chloracidobacterium
thermophilum B]
gi|347586265|gb|AEP10795.1| microcin-processing peptidase 2, Unknown type peptidase, MEROPS
family U62 [Candidatus Chloracidobacterium thermophilum
B]
Length = 479
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 245/477 (51%), Positives = 328/477 (68%), Gaps = 7/477 (1%)
Query: 265 ARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQG 324
A + L+ + L L +LG DYAD YF++ + LEE ++KT N S+ QG
Sbjct: 5 AIAFFLDRYGLTTGDLDALLGEALAAGGDYADLYFEYCRTNALTLEERLIKTANRSVAQG 64
Query: 325 VGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIAN--QSNGKIKIIKNIKKIKINSLYS 382
VGVR I+G+KT + Y+DDIS ++ A ++ IA QS G + + + K++ LY
Sbjct: 65 VGVRVIAGEKTGYAYTDDISPASIRQAARTAACIAQAAQSVGPVAVTP---QAKVHDLYP 121
Query: 383 FTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRP 442
T+T I KI+LL+ +++ D R+ KV A+L+ E+ V+++ ++G++ DI+P
Sbjct: 122 QTETGDDPPIERKIELLKDIDERCYAADRRIQKVQASLTDEWKVVMVATSEGVLAGDIQP 181
Query: 443 LVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMIL--EKCVSNSVNSALINLEAKPAP 500
L ++ V I +++G G +G GGR + FT+ L E +V A++ +A AP
Sbjct: 182 LARVGVVCIADQDGELRAGRAGGGGRRGFGMFTEGELAPEALAREAVRLAVLQFDAVEAP 241
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG M+VVLG GWPGILLHEAIGHGLE DFNRK +SAFS+ +G+R+AS TIVD+GTL
Sbjct: 242 AGPMEVVLGHGWPGILLHEAIGHGLEADFNRKKTSAFSDLLGQRVASDACTIVDDGTLPG 301
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS+N+DDEG+PT CT LIE GIL+GY+ D +NARL+ + TGN RRES+ HIP+PRMT
Sbjct: 302 RRGSLNMDDEGHPTSCTVLIEKGILRGYINDYLNARLLGVPRTGNGRRESYRHIPMPRMT 361
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NTYML G PE+II SVK GLYA F GGQVDIT+GKFVFSAS+AY+I++G+IT PVK
Sbjct: 362 NTYMLAGTETPEDIIRSVKRGLYAVQFGGGQVDITSGKFVFSASEAYLIEDGRITAPVKD 421
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
ATLIGHGP+ L KV+ +G DM+LD GVG CGKDGQ VPVGVG PT+KI +TVGGT
Sbjct: 422 ATLIGHGPDALTKVTAVGCDMELDLGVGTCGKDGQSVPVGVGLPTIKISEMTVGGTQ 478
>gi|114776578|ref|ZP_01451623.1| Peptidase U62, modulator of DNA gyrase [Mariprofundus ferrooxydans
PV-1]
gi|114553408|gb|EAU55806.1| Peptidase U62, modulator of DNA gyrase [Mariprofundus ferrooxydans
PV-1]
Length = 481
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 237/467 (50%), Positives = 323/467 (69%), Gaps = 14/467 (2%)
Query: 277 EKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTA 336
++ L L +M D D Y +++ +E+ LEEG VK + S +QG+G R I G+ T
Sbjct: 20 KEALQNTLSHMLPANADDGDLYLEYSSSESLALEEGRVKHVSASTHQGIGARVIKGEATG 79
Query: 337 FFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINS------LYSFTDTISSI 390
++D + + L+ A S RSIA+ +G I + I++ LY + ++I
Sbjct: 80 HAFTDRLEPDALMQAAGSARSIASGCSG-------INPVHIHASNTAPRLYQAVNPAANI 132
Query: 391 NIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTI 450
+ E+ +LE+++K+AR DPRV +V AN+S + I I R DG + D RPLV+L +++
Sbjct: 133 DFSERKSVLEKLDKLARELDPRVRQVFANISSSFSDIHIVRMDGAHMHDARPLVRLNISV 192
Query: 451 IVEKNGRREIGNSGCGGRYNYN-YFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLG 509
+VE+NG RE G++G GGR++ + E+ V +V A +NL A+ APAG M VVLG
Sbjct: 193 VVEENGTRETGSAGGGGRFSLQRLLSGDEPERLVREAVRLATLNLTARQAPAGSMPVVLG 252
Query: 510 PGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDD 569
PGWPGILLHEAIGHGLEGDFNRKGSS F++ +GK++A++ IT+VD+GT+A RRGS+ +DD
Sbjct: 253 PGWPGILLHEAIGHGLEGDFNRKGSSVFADKMGKQVAARGITVVDDGTIAERRGSLTVDD 312
Query: 570 EGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKF 629
EG + T LIE+GIL GY+ D NARLM M TGN RRES+AH +PRMTNT+ML G
Sbjct: 313 EGTQSHRTVLIEDGILTGYLMDRQNARLMGMRPTGNGRRESYAHPVLPRMTNTFMLAGND 372
Query: 630 HPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPN 689
P++I++S+ G+YA NF GGQVDIT+GKFVF+ S+AY ++NG I YPVKGATLIG G
Sbjct: 373 TPDDILASLDRGIYAVNFGGGQVDITSGKFVFTTSEAYYVENGVIQYPVKGATLIGAGHE 432
Query: 690 ILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
+L+KVSMIGND+ LDPGVG CGK GQ VPVGVG PT++ID + VGGT
Sbjct: 433 VLQKVSMIGNDLALDPGVGTCGKGGQSVPVGVGLPTIRIDDLIVGGT 479
>gi|260753131|ref|YP_003226024.1| peptidase U62 modulator of DNA gyrase [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
gi|384411809|ref|YP_005621174.1| peptidase U62 modulator of DNA gyrase [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|258552494|gb|ACV75440.1| peptidase U62 modulator of DNA gyrase [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
gi|335932183|gb|AEH62723.1| peptidase U62 modulator of DNA gyrase [Zymomonas mobilis subsp.
mobilis ATCC 10988]
Length = 480
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 236/472 (50%), Positives = 324/472 (68%), Gaps = 11/472 (2%)
Query: 266 RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGV 325
R LL P D K L + + D + Y Q++ +E++ ++G +K ++ G
Sbjct: 16 RPGLLTPDDA------KRLTSQTLHGCDDGELYLQYSVSESFSFDDGRLKNASYDNQAGF 69
Query: 326 GVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTD 385
G+R +SG+ TAF ++ +IS + + A ++ + + Q + + LY+ +
Sbjct: 70 GLRGLSGEATAFAHASEISADAIRRAGETLQLLDPQKGNHPSSPLHTNR----HLYTEAN 125
Query: 386 TISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQ 445
++ EK+ L ++++ AR +DP V +V LS + VI I R DG + DIRPLV+
Sbjct: 126 PLTLKPFAEKVALCQKIDAAARARDPHVCQVSVGLSASWSVIEIVRPDGFVAQDIRPLVR 185
Query: 446 LFVTIIVEKNGRREIGNSGCGGRYNYN-YFTDMILEKCVSNSVNSALINLEAKPAPAGIM 504
L ++++VEKNGRRE G G GGRY Y+ F + +K + ++ SAL+NLEA PAPAG M
Sbjct: 186 LNISVVVEKNGRRESGFYGFGGRYLYDPLFEESAWQKGIDMALASALVNLEAIPAPAGEM 245
Query: 505 KVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGS 564
VVLGPGWPG+LLHEA+GHGLEGDFNRKGSS FS IG+++AS+ +T++D+G++ NRRGS
Sbjct: 246 PVVLGPGWPGVLLHEAVGHGLEGDFNRKGSSVFSGRIGEKVASEGVTVIDDGSIPNRRGS 305
Query: 565 INIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYM 624
++IDDEG PT T LIENGILK YMQD +NARLM M TGN RRES+ H PIPRMTNT+M
Sbjct: 306 LSIDDEGTPTSRTVLIENGILKSYMQDRLNARLMGMKPTGNGRRESYVHAPIPRMTNTFM 365
Query: 625 LNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLI 684
G+ P EI+S VK G++A NF GGQVDIT+GKFVFS ++AY+I+NG+I P+KGATLI
Sbjct: 366 AAGQDDPAEIMSRVKKGIFAKNFGGGQVDITSGKFVFSCTEAYMIENGRIAAPIKGATLI 425
Query: 685 GHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
G GP +L K++ IGND+ LD GVG+CGK GQ VP GVGQPTL ++ +TVGGT
Sbjct: 426 GDGPTVLNKIAAIGNDLALDEGVGICGKGGQSVPAGVGQPTLLVEGLTVGGT 477
>gi|56551240|ref|YP_162079.1| peptidase U62 [Zymomonas mobilis subsp. mobilis ZM4]
gi|56542814|gb|AAV88968.1| peptidase U62 modulator of DNA gyrase [Zymomonas mobilis subsp.
mobilis ZM4]
Length = 480
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 236/472 (50%), Positives = 325/472 (68%), Gaps = 11/472 (2%)
Query: 266 RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGV 325
R LL P D K L + + D + Y Q++ +E++ ++G +K ++ G
Sbjct: 16 RPGLLTPDDA------KRLTSQTLHGCDDGELYLQYSVSESFSFDDGRLKNASYDNQAGF 69
Query: 326 GVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTD 385
G+R +SG+ TAF ++ +IS + + A ++ + + Q + + LY+ +
Sbjct: 70 GLRGLSGEATAFAHASEISADAIRRAGETLQLLDPQKGNHPSSPLHTNR----HLYTEAN 125
Query: 386 TISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQ 445
++ EK+ L ++++ AR +DP V +V LS ++VI I R DG + DIRPLV+
Sbjct: 126 PLTLKPFAEKVALCQKIDAAARARDPHVCQVSVGLSASWNVIEIVRPDGFVAQDIRPLVR 185
Query: 446 LFVTIIVEKNGRREIGNSGCGGRYNYN-YFTDMILEKCVSNSVNSALINLEAKPAPAGIM 504
L ++++VEKNGRRE G G GGRY Y+ F + +K + ++ SAL+NLEA PAPAG M
Sbjct: 186 LNISVVVEKNGRRESGFYGFGGRYLYDPLFEESAWQKGIDMALASALVNLEAIPAPAGEM 245
Query: 505 KVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGS 564
VVLGPGWPG+LLHEA+GHGLEGDFNRKGSS FS IG+++AS+ +T++D+G++ NRRGS
Sbjct: 246 PVVLGPGWPGVLLHEAVGHGLEGDFNRKGSSVFSGRIGEKVASEGVTVIDDGSIPNRRGS 305
Query: 565 INIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYM 624
++IDDEG PT T LIENGILK YMQD +NARLM M TGN RRES+ H PIPRMTNT+M
Sbjct: 306 LSIDDEGTPTSRTVLIENGILKSYMQDRLNARLMGMKPTGNGRRESYVHAPIPRMTNTFM 365
Query: 625 LNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLI 684
G+ P EI+S VK G++A NF GGQVDIT+GKFVFS ++AY+I+NG+I P+KGATLI
Sbjct: 366 AAGQDDPAEIMSRVKKGIFAKNFGGGQVDITSGKFVFSCTEAYMIENGRIAAPIKGATLI 425
Query: 685 GHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
G GP +L K++ IGND+ LD GVG+CGK GQ VP GVGQPTL ++ +TVGGT
Sbjct: 426 GDGPTVLNKIAAIGNDLALDEGVGICGKGGQSVPAGVGQPTLLVEGLTVGGT 477
>gi|149185051|ref|ZP_01863368.1| peptidase U62, modulator of DNA gyrase [Erythrobacter sp. SD-21]
gi|148831162|gb|EDL49596.1| peptidase U62, modulator of DNA gyrase [Erythrobacter sp. SD-21]
Length = 476
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 228/447 (51%), Positives = 317/447 (70%), Gaps = 5/447 (1%)
Query: 292 VDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINA 351
D + Y QF +E + ++G +KT ++S + G G+R +SG+ T F ++++IS + A
Sbjct: 33 CDDGELYLQFIASEAFGFDDGRLKTADYSRDSGFGLRGVSGETTGFAHANEISAAAISRA 92
Query: 352 VKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDP 411
++ R + S + + LY+ + + EK+ LLE+++ +AR KDP
Sbjct: 93 GETLRLLDATSQPLAAPPERTNR----HLYTDLCPLDLVPFEEKVALLEKIDAVARAKDP 148
Query: 412 RVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNY 471
RV +V A+L + V+ I R DG I DIRPLV+L + ++ E+NGRRE G G GGRY Y
Sbjct: 149 RVAQVSASLLANWSVVEIVRPDGHIARDIRPLVRLNIQVVAEQNGRRETGFYGMGGRYLY 208
Query: 472 N-YFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFN 530
+ F + + + +V AL+NL++ APAG V+LGPGWPG+LLHEA+GHGLEGDFN
Sbjct: 209 DRLFDEGAWMRGIDEAVRQALVNLDSVAAPAGEQTVLLGPGWPGVLLHEAVGHGLEGDFN 268
Query: 531 RKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQ 590
RKG+SAFS IG+R+A+ +T+VD+G++ +RRGS++IDDEG PT+ T LIE+GILKGYMQ
Sbjct: 269 RKGTSAFSGRIGERVAAPGVTVVDDGSMPDRRGSLSIDDEGTPTRETVLIEDGILKGYMQ 328
Query: 591 DIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGG 650
D +NARLM ++ TGN RRES+ H P+PRMTNT+M +G PEE++S V +G+YAT+F GG
Sbjct: 329 DRLNARLMGVAATGNGRRESYQHAPMPRMTNTFMRSGTDDPEELLSRVDDGIYATSFGGG 388
Query: 651 QVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVC 710
QVDIT+GKFVF+ ++AY ++ GKI +P+KGATLIG GP++L +V+ IGNDM LD GVG+C
Sbjct: 389 QVDITSGKFVFACTEAYKVEKGKIVHPIKGATLIGDGPSVLTRVTGIGNDMALDEGVGIC 448
Query: 711 GKDGQMVPVGVGQPTLKIDSITVGGTN 737
GK GQ VP GVGQPTL ID ITVGGT
Sbjct: 449 GKGGQSVPAGVGQPTLLIDGITVGGTG 475
>gi|338991934|ref|ZP_08634723.1| Peptidase U62, modulator of DNA gyrase [Acidiphilium sp. PM]
gi|338205143|gb|EGO93490.1| Peptidase U62, modulator of DNA gyrase [Acidiphilium sp. PM]
Length = 483
Score = 480 bits (1236), Expect = e-132, Method: Compositional matrix adjust.
Identities = 226/446 (50%), Positives = 317/446 (71%), Gaps = 4/446 (0%)
Query: 292 VDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINA 351
D + + ++ ++E L++G ++ NF +G G+RA++G+ + ++ +IS L A
Sbjct: 39 ADDGELFLEYRESEVVSLDDGRIRNANFDSRRGFGLRAVTGEAAVYAHAGEISDAALARA 98
Query: 352 VKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDP 411
V++ R+ A Q G + LY+ + ++ + + LL ++ AR DP
Sbjct: 99 VETLRA-ARQ--GDAGTVAVAPAAATRRLYTGHNPLAEMPFAARAALLGEIDAYARGADP 155
Query: 412 RVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNY 471
RV++V+A+L+GE+ V+ I R DG+ VAD+RPLV L V++++E++GRRE G G GGR Y
Sbjct: 156 RVVQVMASLAGEWQVVEIVRADGVRVADVRPLVVLHVSVVMEQDGRRESGGHGAGGRATY 215
Query: 472 NYFTD-MILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFN 530
T V S+ A +NL++ PAPAG M VVLG GWPGILLHEAIGHGLEGDFN
Sbjct: 216 EGVTAPAFWRAAVDESIRKAALNLDSVPAPAGEMPVVLGAGWPGILLHEAIGHGLEGDFN 275
Query: 531 RKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQ 590
RK +SAF+ +GKR+ SK +T+VD+GT+ +RRGS+++DDEG P+ T LIE+GIL GYMQ
Sbjct: 276 RKKTSAFAGLMGKRVGSKGVTVVDDGTIPDRRGSLSVDDEGTPSGRTVLIEDGILTGYMQ 335
Query: 591 DIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGG 650
D NARLM M+ TGN RR+S+AH+P+PRMTNT ML G+ E++I SVK G+YA NF GG
Sbjct: 336 DRQNARLMGMAPTGNGRRQSYAHLPMPRMTNTIMLEGEASREDMIRSVKRGIYAANFGGG 395
Query: 651 QVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVC 710
QVDIT+GKFVF+AS+AY+I++G++ PVKGATLIG+GP+ L +V MIGND++LDPG+G C
Sbjct: 396 QVDITSGKFVFTASEAYMIEDGRVGAPVKGATLIGNGPDALTRVEMIGNDLELDPGIGTC 455
Query: 711 GKDGQMVPVGVGQPTLKIDSITVGGT 736
GK+GQ VPVGVGQP++ I +TVGGT
Sbjct: 456 GKNGQGVPVGVGQPSILIGGLTVGGT 481
>gi|393723089|ref|ZP_10343016.1| C69 family peptidase [Sphingomonas sp. PAMC 26605]
Length = 476
Score = 480 bits (1236), Expect = e-132, Method: Compositional matrix adjust.
Identities = 228/448 (50%), Positives = 317/448 (70%), Gaps = 5/448 (1%)
Query: 290 NKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLI 349
K D + Y Q+ K+E + ++G +KT ++ + G G+RA+SG+ TAF +++++S +
Sbjct: 31 GKADDGELYLQYRKSEAFGFDDGRLKTASYDTHSGFGLRAVSGEMTAFAHANELSAAAIK 90
Query: 350 NAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLK 409
A ++ I S K + + LY+ +D + + +K+ L + ++ AR +
Sbjct: 91 RASETMALIDPSSAPKAGPPRATNR----HLYTASDPLDLVPFADKVNLCQTIDAAARAR 146
Query: 410 DPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRY 469
DPRV +V +LSG ++V+ I R DG I D+RPLV+L V+I+VE+NGRRE G G GGRY
Sbjct: 147 DPRVAQVSVSLSGSWNVVEIVRADGFIATDVRPLVRLNVSIVVEQNGRRETGTFGLGGRY 206
Query: 470 NYN-YFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGD 528
Y+ + + ++ A++NL++ APAG M V+LGPGWPGILLHEAIGHGLEGD
Sbjct: 207 LYDELMAPATWNRAIDEALAQAVVNLDSVAAPAGEMTVLLGPGWPGILLHEAIGHGLEGD 266
Query: 529 FNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGY 588
FNRKG+SAFS IG+R+A+ +T+VD+G++A++RGS++IDDEG PTQ LIE+GILKGY
Sbjct: 267 FNRKGTSAFSGRIGERVAAPGVTVVDDGSIADKRGSLSIDDEGTPTQENVLIEDGILKGY 326
Query: 589 MQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFS 648
+QD +NARLM ++ TGN RRESFAH P+PRMTNT+M GK P E++S VKNG++A +F
Sbjct: 327 IQDRLNARLMGVAPTGNGRRESFAHAPMPRMTNTFMRGGKDDPAELLSRVKNGIFAKSFG 386
Query: 649 GGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVG 708
GGQVDI +GKFVFS ++AY I+NG+I P+KGATLIG GP+ L +V IGND LD GVG
Sbjct: 387 GGQVDIVSGKFVFSCTEAYKIENGRIGAPIKGATLIGDGPSCLTRVEGIGNDFALDEGVG 446
Query: 709 VCGKDGQMVPVGVGQPTLKIDSITVGGT 736
+CGK GQ VP GVGQPTL + +TVGGT
Sbjct: 447 MCGKGGQSVPAGVGQPTLLVAGLTVGGT 474
>gi|353328272|ref|ZP_08970599.1| tldD protein [Wolbachia endosymbiont wVitB of Nasonia vitripennis]
Length = 472
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 257/461 (55%), Positives = 335/461 (72%), Gaps = 13/461 (2%)
Query: 280 LLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFY 339
+ KI+ N + D + + +F ++E+ + ++ I+K + +I +G G+R+ D T+F
Sbjct: 19 VYKIVNNALSDS-DGGELFLEFCQSESLVFDDNILKHMDLNIRRGFGLRSFCEDSTSFVC 77
Query: 340 SDDISKNTLINA---VKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKI 396
S +IS+ + NA VKS+ S+ N++N I + + ++ LYS + I+ +++ KI
Sbjct: 78 SSEISEKEISNAASIVKSSVSL-NKTN-SINLNEGTRE-----LYSKINPINEMDLNSKI 130
Query: 397 KLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNG 456
KLL V + R K+ V +V LSGE+ V+ I + D + +DIRPLV+ V +I+EKNG
Sbjct: 131 KLLNEVNEYVRSKNNYVKQVKITLSGEWQVVQIIKGDHRL-SDIRPLVRFNVLVILEKNG 189
Query: 457 RREIGNSGCGGRYNYNYFTDMILEKCVSN-SVNSALINLEAKPAPAGIMKVVLGPGWPGI 515
R E G++G GGR +Y+ F K V+N ++ AL+NLEA PAPAG M VVLGPGWPG+
Sbjct: 190 RAEKGSAGHGGRDSYSKFVSEKKWKEVANQALEQALVNLEAIPAPAGEMTVVLGPGWPGV 249
Query: 516 LLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQ 575
LLHEA+GHGLEGDFNRKG SAFS+ IGK++A+ IT+VD+GTL N RGSI+IDDEG
Sbjct: 250 LLHEAVGHGLEGDFNRKGISAFSDSIGKQVAASGITVVDDGTLPNLRGSISIDDEGTLPG 309
Query: 576 CTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEII 635
LIE+GILKGYMQD MNA+LM +S TGN RRES+ + +PRMTNTYML GK EEII
Sbjct: 310 YNVLIEDGILKGYMQDHMNAKLMGVSPTGNGRRESYKEVTMPRMTNTYMLPGKHTTEEII 369
Query: 636 SSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVS 695
SSVK GLYA NF GGQVDIT+GKFVFS+S+AY+I+NGKIT PVKGATLIG GP +LKKVS
Sbjct: 370 SSVKKGLYAVNFGGGQVDITSGKFVFSSSEAYLIENGKITQPVKGATLIGDGPTVLKKVS 429
Query: 696 MIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
MIG D+KLDPGVG C KDGQ VPVGVGQPTLK+D+ITVGGT
Sbjct: 430 MIGEDIKLDPGVGTCSKDGQNVPVGVGQPTLKVDAITVGGT 470
>gi|330991241|ref|ZP_08315193.1| Protein tldD-like protein [Gluconacetobacter sp. SXCC-1]
gi|329761734|gb|EGG78226.1| Protein tldD-like protein [Gluconacetobacter sp. SXCC-1]
Length = 486
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 220/444 (49%), Positives = 314/444 (70%), Gaps = 4/444 (0%)
Query: 286 NMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISK 345
N +D + + ++ ++E L+EG++++ F + G G+RA+ ++T F +SD+IS+
Sbjct: 36 NQALTGMDDGELFLEYRESEAISLDEGVIRSATFDTSSGFGLRAVLEEETGFAHSDEISE 95
Query: 346 NTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKI 405
+ + A ++ I + G + + + LY + ++ + +L ++
Sbjct: 96 SAIRRAAETVTQIRSGRTGTLAVGPRATN---HRLYPDINPLAEGTFASRAAMLSELDAY 152
Query: 406 ARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGC 465
AR +DPRV++V+A+LS E+ + I R DG +ADIRPLV++ V+++VE++GRRE G G
Sbjct: 153 ARARDPRVVQVMASLSAEWQAVQIIRPDGQRMADIRPLVRMNVSVVVEQDGRRESGGHGL 212
Query: 466 GGRYNYN-YFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHG 524
GGRY Y + + V ++ AL+NL+A+PAPAG M+VVLG GWPGILLHEA+GHG
Sbjct: 213 GGRYAYTRLLAPQVWQGAVDEALRMALVNLDARPAPAGEMEVVLGAGWPGILLHEAVGHG 272
Query: 525 LEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGI 584
LEGDFNRKG+SAF+ +GKR+A+ +T+VD+GTL RRGS+ IDDEG PT T +IE+GI
Sbjct: 273 LEGDFNRKGTSAFAGLMGKRVAAPGVTVVDDGTLPERRGSLTIDDEGTPTSRTVMIEDGI 332
Query: 585 LKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYA 644
L GY+QD +NARLM + TGN RR+S+AH P+PRMTNT ML G E++I S K GLYA
Sbjct: 333 LTGYLQDRLNARLMGVPPTGNGRRQSYAHAPMPRMTNTIMLGGDATTEDMIRSTKRGLYA 392
Query: 645 TNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLD 704
NF GGQVDIT+GKFVF+AS+AY+I++GKIT+PV+GATLIG+G + + KV+MIG++ LD
Sbjct: 393 VNFGGGQVDITSGKFVFAASEAYMIEDGKITFPVRGATLIGNGADAMTKVTMIGSEPALD 452
Query: 705 PGVGVCGKDGQMVPVGVGQPTLKI 728
PG+G CGK GQ VPVGVGQPTLK+
Sbjct: 453 PGIGTCGKSGQGVPVGVGQPTLKM 476
>gi|427427356|ref|ZP_18917400.1| TldD protein [Caenispirillum salinarum AK4]
gi|425883282|gb|EKV31958.1| TldD protein [Caenispirillum salinarum AK4]
Length = 477
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 228/452 (50%), Positives = 316/452 (69%), Gaps = 10/452 (2%)
Query: 290 NKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYS---DDISKN 346
+ D + Y ++ ++E+ ++G VK+ +F QG G+RA+SG+ T F ++ DD + N
Sbjct: 31 DGCDDGELYLEYRQSESIAYDDGRVKSASFDTAQGFGLRAVSGEATGFAHATTLDDAALN 90
Query: 347 TLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIA 406
+ VK+ R A + + N +LY+ + + + EK+++L ++ A
Sbjct: 91 RAADTVKAVRRGAGGTMAEPPAGTN------KALYTDANPLPMVPFEEKVRVLAEIDAYA 144
Query: 407 RLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCG 466
R KDPRV +V+A+L+G + + I R DG + ADIRPLV++ V+++V K R E G+ G G
Sbjct: 145 RAKDPRVCQVMASLTGSWQAVHIIRADGTMAADIRPLVRMNVSVMVAKGDRMETGSHGMG 204
Query: 467 GRYNYNYFTD-MILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGL 525
GR Y+ + + V ++ A++NL++ APAG M VVLGPGWPG+LLHEA+GHGL
Sbjct: 205 GRVTYDGLVEEHAWKAAVDEAIRQAVVNLDSIDAPAGEMPVVLGPGWPGVLLHEAVGHGL 264
Query: 526 EGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGIL 585
EGDFNRK +SAFS +GKR+A+ +T+VD+GTL +RRGS+ IDDEG PT T LIE+GIL
Sbjct: 265 EGDFNRKKTSAFSESMGKRVAAPGVTVVDDGTLPDRRGSLTIDDEGTPTSRTVLIEDGIL 324
Query: 586 KGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYAT 645
GY+ D +NARLM TGN RR+S+AH P+PRMTNTYM G +PE+II SVK GLYA
Sbjct: 325 TGYIFDRLNARLMGAQPTGNGRRQSYAHAPMPRMTNTYMEGGDANPEDIIRSVKKGLYAV 384
Query: 646 NFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDP 705
NF GGQVDI +GKFVFSAS+AY+I++GK+ PVKGATLIG+GP++L +V IGNDM LDP
Sbjct: 385 NFGGGQVDIVSGKFVFSASEAYMIEDGKLGAPVKGATLIGNGPDVLTRVKAIGNDMGLDP 444
Query: 706 GVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
G+G CGK+GQ VP GVGQPTL ++ +TVGGT+
Sbjct: 445 GIGTCGKEGQGVPCGVGQPTLLVEPLTVGGTS 476
>gi|322436951|ref|YP_004219163.1| peptidase U62 modulator of DNA gyrase [Granulicella tundricola
MP5ACTX9]
gi|321164678|gb|ADW70383.1| peptidase U62 modulator of DNA gyrase [Granulicella tundricola
MP5ACTX9]
Length = 492
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/482 (49%), Positives = 326/482 (67%), Gaps = 3/482 (0%)
Query: 257 KNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKT 316
+ H N + +E L E+++ + LG DYAD YF+ + + ++EG+VKT
Sbjct: 12 RETHDTNDHKRYFIEKLGLSERLMERCLGEALSAGGDYADLYFESVTSTSLGMDEGLVKT 71
Query: 317 GNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIK 376
+ I+ G G+R +SG++T F ++DD+S L+ A ++ IA S ++ + +
Sbjct: 72 ASQGISVGCGIRVVSGERTGFAFTDDLSSERLLRAARTAALIA--SGPAKELASGFRHTE 129
Query: 377 INSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLI 436
SLY S ++ K+ L+ER +K AR D R+ +V A ++ E IL+ +DG
Sbjct: 130 TPSLYPIAGLSSDADLAAKLALIERADKAARAYDSRITQVRAGINDEVRRILVAASDGTF 189
Query: 437 VADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMIL-EKCVSNSVNSALINLE 495
+D +PL +L V +I + + G+SG GGR ++F E + +AL+ L
Sbjct: 190 ASDTQPLARLNVMVIAKDSQNTARGSSGGGGRVTLDFFEGTKSPEHFAREAARTALLQLG 249
Query: 496 AKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDN 555
A APAG M+VVLGPGWPG+LLHEA+GHGLE DFNRK +SAFS IG+++AS ++T+VDN
Sbjct: 250 AVDAPAGEMEVVLGPGWPGVLLHEAVGHGLEADFNRKKTSAFSGLIGQQVASSKVTVVDN 309
Query: 556 GTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIP 615
GT+ANRRGS+N+DDEG PTQ T LIENGILK ++ D +N+RLM TG+ RRES+ HIP
Sbjct: 310 GTIANRRGSLNVDDEGVPTQETVLIENGILKTFLSDKLNSRLMGGVSTGSGRRESYHHIP 369
Query: 616 IPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKIT 675
+PRMTNTYMLNG PE+II SVK GLYA NF GGQVDITNGKFVFSAS+AY+I++GK+T
Sbjct: 370 MPRMTNTYMLNGDDMPEDIIKSVKRGLYAVNFGGGQVDITNGKFVFSASEAYLIEDGKVT 429
Query: 676 YPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PVKGATL+G+GP LK VSM+GND+ LD G+G CGK GQ VPVGVG PT+K+D +TVGG
Sbjct: 430 RPVKGATLVGNGPEALKYVSMVGNDLALDEGIGTCGKAGQSVPVGVGMPTIKLDRMTVGG 489
Query: 736 TN 737
T
Sbjct: 490 TG 491
>gi|326403412|ref|YP_004283493.1| protein TldD [Acidiphilium multivorum AIU301]
gi|325050273|dbj|BAJ80611.1| protein TldD [Acidiphilium multivorum AIU301]
Length = 483
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 223/446 (50%), Positives = 315/446 (70%), Gaps = 4/446 (0%)
Query: 292 VDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINA 351
D + + ++ ++E L++G ++ NF +G G+RA++G+ + ++ +IS L A
Sbjct: 39 ADDGELFLEYRESEVVSLDDGRIRNANFDSRRGFGLRAVTGEAAVYAHAGEISDAALARA 98
Query: 352 VKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDP 411
V++ R+ G + LY+ + ++ + + LL ++ AR D
Sbjct: 99 VETLRA---ARQGDAGTVAVAPAAATRRLYTGHNPLAEMPFAARAALLGEIDAYARAADQ 155
Query: 412 RVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNY 471
RV++V+A+L+GE+ V+ I R DG+ VAD+RPLV L V++++E++GRRE G G GGR Y
Sbjct: 156 RVVQVMASLAGEWQVVEIVRADGVRVADVRPLVVLHVSVVMEQDGRRESGGHGAGGRATY 215
Query: 472 NYFTD-MILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFN 530
+ T V S+ A +NL++ PAPAG M VVLG GWPGILLHEAIGHGLEGDFN
Sbjct: 216 DGVTAPAFWRAAVDESIRKAALNLDSVPAPAGEMPVVLGAGWPGILLHEAIGHGLEGDFN 275
Query: 531 RKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQ 590
RK +SAF+ +GKR+ SK +T+VD+GT+ +RRGS+++DDEG P+ T LIE+GIL GYMQ
Sbjct: 276 RKKTSAFAGLMGKRVGSKGVTVVDDGTIPDRRGSLSVDDEGTPSGRTVLIEDGILTGYMQ 335
Query: 591 DIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGG 650
D NARLM M+ TGN RR+S+AH+P+PRMTNT ML G+ E++I SVK G+YA NF GG
Sbjct: 336 DRQNARLMGMAPTGNGRRQSYAHLPMPRMTNTIMLEGEASREDMIRSVKRGIYAANFGGG 395
Query: 651 QVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVC 710
QVDIT+GKFVF+AS+AY+I++G++ PVKGATLIG+GP+ L +V MIGND++LDPG+G C
Sbjct: 396 QVDITSGKFVFTASEAYMIEDGRVGAPVKGATLIGNGPDALTRVEMIGNDLELDPGIGTC 455
Query: 711 GKDGQMVPVGVGQPTLKIDSITVGGT 736
GK+GQ VPVGVGQP++ I +TVGGT
Sbjct: 456 GKNGQGVPVGVGQPSILIGGLTVGGT 481
>gi|148260226|ref|YP_001234353.1| C69 family peptidase [Acidiphilium cryptum JF-5]
gi|146401907|gb|ABQ30434.1| microcin-processing peptidase 2, Unknown type peptidase, MEROPS
family U62 [Acidiphilium cryptum JF-5]
Length = 483
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 223/446 (50%), Positives = 315/446 (70%), Gaps = 4/446 (0%)
Query: 292 VDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINA 351
D + + ++ ++E L++G ++ NF +G G+RA++G+ + ++ +IS L A
Sbjct: 39 ADDGELFLEYRESEVVSLDDGRIRNANFDSRRGFGLRAVTGEAAVYAHAGEISDAALARA 98
Query: 352 VKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDP 411
V++ R+ G + LY+ + ++ + + LL ++ AR D
Sbjct: 99 VETLRA---ARQGDAGTVAVAPAAATRRLYTGHNPLAEMPFAARAALLGEIDAYARAADK 155
Query: 412 RVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNY 471
RV++V+A+L+GE+ V+ I R DG+ VAD+RPLV L V++++E++GRRE G G GGR Y
Sbjct: 156 RVVQVMASLAGEWQVVEIVRADGVRVADVRPLVVLHVSVVMEQDGRRESGGHGAGGRATY 215
Query: 472 NYFTD-MILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFN 530
+ T V S+ A +NL++ PAPAG M VVLG GWPGILLHEAIGHGLEGDFN
Sbjct: 216 DGVTAPAFWRAAVDESIRKAALNLDSVPAPAGEMPVVLGAGWPGILLHEAIGHGLEGDFN 275
Query: 531 RKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQ 590
RK +SAF+ +GKR+ SK +T+VD+GT+ +RRGS+++DDEG P+ T LIE+GIL GYMQ
Sbjct: 276 RKKTSAFAGLMGKRVGSKGVTVVDDGTIPDRRGSLSVDDEGTPSGRTVLIEDGILTGYMQ 335
Query: 591 DIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGG 650
D NARLM M+ TGN RR+S+AH+P+PRMTNT ML G+ E++I SVK G+YA NF GG
Sbjct: 336 DRQNARLMGMAPTGNGRRQSYAHLPMPRMTNTIMLEGEASREDMIRSVKRGIYAANFGGG 395
Query: 651 QVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVC 710
QVDIT+GKFVF+AS+AY+I++G++ PVKGATLIG+GP+ L +V MIGND++LDPG+G C
Sbjct: 396 QVDITSGKFVFTASEAYMIEDGRVGAPVKGATLIGNGPDALTRVEMIGNDLELDPGIGTC 455
Query: 711 GKDGQMVPVGVGQPTLKIDSITVGGT 736
GK+GQ VPVGVGQP++ I +TVGGT
Sbjct: 456 GKNGQGVPVGVGQPSILIGGLTVGGT 481
>gi|384228384|ref|YP_005620119.1| TldD protein [Buchnera aphidicola str. Ua (Uroleucon ambrosiae)]
gi|345539317|gb|AEO08184.1| TldD protein [Buchnera aphidicola str. Ua (Uroleucon ambrosiae)]
Length = 483
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 234/460 (50%), Positives = 322/460 (70%), Gaps = 9/460 (1%)
Query: 284 LGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDI 343
L + +DY D +FQ E+W LE I+K GN+ +QG+GVRAI + F Y+D I
Sbjct: 25 LEELCTRDIDYGDCFFQSHLYESWFLENSIIKEGNYHFDQGIGVRAIKNESIGFAYADQI 84
Query: 344 SKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVE 403
S +L ++ RSI + G +K K + K I Y+ + + + +EKI LL R +
Sbjct: 85 SIESLKTSIHKARSIISMK-GSVKN-KKLSKKSIKYYYNNINPLEIFSSQEKIDLLYRAD 142
Query: 404 KIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNS 463
IAR D RV +V NL+G Y+ +LI DG IVADIRPLVQ + ++VE +G+RE G S
Sbjct: 143 HIARSIDHRVKEVNVNLTGSYEQVLIASTDGNIVADIRPLVQFSINVLVEDHGKRERGRS 202
Query: 464 GCGGRYNYNYF-------TDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGIL 516
G G R +YN+F ++ +E +V AL+NL AK AP+G V+LG GWPG+L
Sbjct: 203 GGGSRTDYNFFLNKDDISNEIRIEYWAREAVRIALLNLSAKSAPSGTFPVILGSGWPGVL 262
Query: 517 LHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQC 576
LHEA+GHGLEGDFNR+ +S F+N IGK++ S+ TI+D+GT+ N+RGS++IDDEG P Q
Sbjct: 263 LHEAVGHGLEGDFNRRKTSVFTNMIGKKVTSELCTIIDDGTMHNQRGSVSIDDEGTPGQR 322
Query: 577 TTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIIS 636
LIENG+LK YMQD +NARLM M +TGN RRES++ +PIPRMTNT+ML+GK +++I+
Sbjct: 323 NILIENGVLKKYMQDKLNARLMGMEVTGNGRRESYSCLPIPRMTNTFMLSGKSKIDDMIN 382
Query: 637 SVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSM 696
SV G+YA NFSGGQVDIT+G FVFS S+AY+IK GKI P+K TLIG G ++++SM
Sbjct: 383 SVDYGIYAVNFSGGQVDITSGNFVFSTSEAYLIKKGKIITPIKNTTLIGSGLEAMQQISM 442
Query: 697 IGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
+G+D+K+D G+G+CGKDGQ +PVG+GQP++K+D +T+GGT
Sbjct: 443 VGDDLKMDQGMGMCGKDGQNIPVGIGQPSIKLDRLTIGGT 482
>gi|167041362|gb|ABZ06115.1| putative modulator of DNA gyrase [uncultured marine microorganism
HF4000_005K23]
Length = 470
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 239/455 (52%), Positives = 332/455 (72%), Gaps = 18/455 (3%)
Query: 290 NKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISK---- 345
NK D + Y + +K+E +L++ +K +++ + G G+RA++GD TA+ +S++ISK
Sbjct: 24 NKCDDGELYLENSKSEILVLDDNKIKITSYNTSLGYGLRAVTGDVTAYSHSNEISKHSLK 83
Query: 346 ---NTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERV 402
N L++ +KS + ++S + N+K LYS + I ++ KI +L++V
Sbjct: 84 ESSNNLLSTLKSKKGTYDRSTSRT----NVK------LYSDINPIEVKPLKAKIDILKKV 133
Query: 403 EKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGN 462
++ R K+ V +V A+ G+++ I I + G DIRPL++ V+++VEKNGR+E+G
Sbjct: 134 DEYLRKKENIVKQVTASFLGQHEEIEILKCGGETFKDIRPLIRFNVSVMVEKNGRKEMGA 193
Query: 463 SGCGGRYNYN-YFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAI 521
G GGR +Y+ Y D ++ ++ A +NL++KPAPAG MKVVLGPG PGILLHEAI
Sbjct: 194 FGTGGRRSYDDYLKDENWKQICDEALRQAQVNLDSKPAPAGEMKVVLGPGLPGILLHEAI 253
Query: 522 GHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIE 581
GHGLEGDFNRK +SAF N + +++A + ITIVD+GT+ANRRGS+ IDDEG PT T LIE
Sbjct: 254 GHGLEGDFNRKKTSAFHNLMNQKVAREGITIVDDGTIANRRGSLTIDDEGTPTSRTVLIE 313
Query: 582 NGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNG 641
NGILK Y+QD +NARLMNM TGN RRESF H+P+PRMTNT+M+NG+ EE+I SV G
Sbjct: 314 NGILKNYIQDRLNARLMNMKSTGNGRRESFRHMPMPRMTNTFMVNGRHSQEEMIKSVDKG 373
Query: 642 LYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDM 701
++A +F GGQVDIT+GKFVF+ ++AY I+NGKIT+PVKGATLIG+GP+IL KVSM+GNDM
Sbjct: 374 IFAVSFGGGQVDITSGKFVFNCTEAYQIENGKITFPVKGATLIGNGPDILTKVSMVGNDM 433
Query: 702 KLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
KLDPG+G+CGK+GQ VPVGVGQP++ +D I VGGT
Sbjct: 434 KLDPGIGICGKNGQTVPVGVGQPSMLVDQIIVGGT 468
>gi|110633096|ref|YP_673304.1| microcin-processing peptidase 2 [Chelativorans sp. BNC1]
gi|110284080|gb|ABG62139.1| microcin-processing peptidase 2. Unknown type peptidase. MEROPS
family U62 [Chelativorans sp. BNC1]
Length = 471
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 227/475 (47%), Positives = 326/475 (68%), Gaps = 6/475 (1%)
Query: 264 IARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQ 323
++RS L++ FD + L I+ D + + ++ + E + + G +KT +F+ +
Sbjct: 1 MSRS-LIDSFDTSPEKLKSIVSQTISG-ADDGELFLEYREGEALVFDNGRLKTASFNTDM 58
Query: 324 GVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSF 383
G G+RA++G+ T + +S D+S+ L+ A + ++ + +G + LY
Sbjct: 59 GFGLRAVAGEATGYAHSRDLSEAALLRAADAVSAVKHGYSGTLAAPPAGTN---QHLYGE 115
Query: 384 TDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPL 443
+ I++ EK KLL+ ++ R KDPRV +V A+L+ + + I R DG I DIRPL
Sbjct: 116 DNPIAAPGFEEKAKLLQDIDGWLRAKDPRVRQVTASLAASWQQVEILRADGHIARDIRPL 175
Query: 444 VQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAG 502
V++ ++++V R+E G+ G GGR +++ F + ++ AL+NLEA PAPAG
Sbjct: 176 VRMHISVVVGDGDRQESGSYGMGGRKSFSEFIAEDSWRHAAGEALRQALVNLEAVPAPAG 235
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
+ +VL GWPG++LHEA+GHGLEGDFNRK +SAF+ +G ++A+K +T+VD+GT+A RR
Sbjct: 236 TLDIVLANGWPGVMLHEAVGHGLEGDFNRKKTSAFAGLMGSQVAAKGVTVVDDGTIAERR 295
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS+ IDDEG PT T +IE+G L GYMQD +NARLM M TGN RRES+AH+P+PRMTNT
Sbjct: 296 GSLTIDDEGTPTNRTVMIEDGKLVGYMQDRLNARLMGMRPTGNGRRESYAHVPMPRMTNT 355
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
YML G PEEII+SVK G+YA +F GGQVDIT+GKFVF ++AY+I++GK+T PV+GAT
Sbjct: 356 YMLGGDRTPEEIIASVKKGIYAVSFGGGQVDITSGKFVFDCTEAYMIEDGKVTRPVRGAT 415
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
LIG+GP +K+VSMIGNDMKLD G+G+CGK GQ VPVGVGQP L++D +TVGGT
Sbjct: 416 LIGNGPEAMKRVSMIGNDMKLDTGIGMCGKAGQGVPVGVGQPHLRMDQMTVGGTQ 470
>gi|374291962|ref|YP_005038997.1| peptidase U62, modulator of DNA gyrase [Azospirillum lipoferum 4B]
gi|357423901|emb|CBS86763.1| Peptidase U62, modulator of DNA gyrase [Azospirillum lipoferum 4B]
Length = 477
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 239/448 (53%), Positives = 316/448 (70%), Gaps = 4/448 (0%)
Query: 290 NKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLI 349
+ D + Y ++ ++E+ ++G +K+ +F QG G+RAI+GD T + ++ ++S+ +
Sbjct: 31 HSADDGELYLEYAQSESLGWDDGKLKSASFDTTQGFGLRAIAGDATGYAHASNLSEEAIR 90
Query: 350 NAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLK 409
A + R++ G + +LY + + + EK+KLL ++ AR K
Sbjct: 91 RAAATVRAV---QAGHTGTLAEPPAGTNRALYIPDNPLHLVPFEEKVKLLADIDAYARAK 147
Query: 410 DPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRY 469
D RV +V ++SGE+ + I R DG+ VAD+RPLV+L V+++V + R E G G GGR
Sbjct: 148 DERVRQVSCSISGEWQAVQIMRADGVRVADLRPLVRLNVSVVVAEGDRMETGGYGGGGRV 207
Query: 470 NY-NYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGD 528
Y +Y V ++ AL+NL + PAPAG M VVLG GWPGILLHEAIGHGLEGD
Sbjct: 208 TYEHYIQPETWRGFVDEALRQALVNLSSVPAPAGEMTVVLGSGWPGILLHEAIGHGLEGD 267
Query: 529 FNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGY 588
FNRK +SAFS +G+RIA+ +TIVD+GT+ N RGSI++DDEG P QCTTLIE+GIL G+
Sbjct: 268 FNRKKTSAFSGLMGQRIAAPGVTIVDDGTIENSRGSISVDDEGTPGQCTTLIEDGILVGF 327
Query: 589 MQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFS 648
MQD MNARLM M TGN RR+SFA+ P+PRMTNT M NG P+EII+SVK G+YA NF
Sbjct: 328 MQDRMNARLMGMRPTGNGRRQSFAYNPMPRMTNTVMRNGNHTPDEIIASVKKGIYAKNFG 387
Query: 649 GGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVG 708
GGQVDITNGKFVFSAS+AY+I++GK+ VKGATLIG+GP+ L KVSMIGND +LDPGVG
Sbjct: 388 GGQVDITNGKFVFSASEAYLIEDGKLGPAVKGATLIGNGPDSLTKVSMIGNDSRLDPGVG 447
Query: 709 VCGKDGQMVPVGVGQPTLKIDSITVGGT 736
CGKDGQ VPVGVGQPTLK++ +TVGGT
Sbjct: 448 TCGKDGQGVPVGVGQPTLKLEGLTVGGT 475
>gi|209966875|ref|YP_002299790.1| protein tldD [Rhodospirillum centenum SW]
gi|209960341|gb|ACJ00978.1| protein tldD [Rhodospirillum centenum SW]
Length = 478
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 227/448 (50%), Positives = 315/448 (70%), Gaps = 4/448 (0%)
Query: 290 NKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLI 349
+ D + + ++ ++E ++ ++G +K+ +F +QG G+RA++G+ T + ++ +S++ +
Sbjct: 31 HGADDGELFLEYAQSEGFVWDDGKLKSASFDTSQGFGLRAVAGEATGYAHASTLSEDAIR 90
Query: 350 NAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLK 409
A + R++ G +LY+ + + + K+KLLE V+ AR +
Sbjct: 91 RAAGTVRAVHAGHGG---TYAEPPAGTNRALYASDNPLGLVPFEAKVKLLEAVDAYARAR 147
Query: 410 DPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRY 469
DPRV +V +LSGE+ + I R DG V+DIRPLV+L V+++V R E G+ G GGR
Sbjct: 148 DPRVRQVSCSLSGEWQAVQIIRADGHRVSDIRPLVRLNVSVVVADGDRMESGSHGSGGRR 207
Query: 470 NYNYFTD-MILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGD 528
Y F + + + V ++ +AL NL A APAG M VVLGPGW G++LHEAIGHGLEGD
Sbjct: 208 TYERFLEPEVWQAHVDEALRNALTNLSAIDAPAGEMPVVLGPGWCGVMLHEAIGHGLEGD 267
Query: 529 FNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGY 588
FNRK +SAFS +G+R+A+ +T+VD+GTL RGS+ +DDEG PT CTTLIE+GIL GY
Sbjct: 268 FNRKKTSAFSGLLGQRVAAPGVTVVDDGTLEGLRGSLTVDDEGTPTSCTTLIEDGILVGY 327
Query: 589 MQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFS 648
MQD +NARLM + TGN RR+ FAH+P+PRMTNT M +G+ EEII+ VK GLYA NF
Sbjct: 328 MQDRLNARLMGVKPTGNGRRQGFAHMPMPRMTNTVMRSGERTKEEIIAGVKRGLYAVNFG 387
Query: 649 GGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVG 708
GGQVDI +GKFVFSAS+AY+I++G+I VKGATLIG+GP+ L KV+MIGNDM++DPGVG
Sbjct: 388 GGQVDIVSGKFVFSASEAYLIEDGRIGPAVKGATLIGNGPDALTKVTMIGNDMEIDPGVG 447
Query: 709 VCGKDGQMVPVGVGQPTLKIDSITVGGT 736
CGK GQ VPVGVGQPT++ID +TVGGT
Sbjct: 448 TCGKQGQGVPVGVGQPTMRIDGLTVGGT 475
>gi|354594769|ref|ZP_09012806.1| peptidase U62 modulator of DNA gyrase [Commensalibacter intestini
A911]
gi|353671608|gb|EHD13310.1| peptidase U62 modulator of DNA gyrase [Commensalibacter intestini
A911]
Length = 483
Score = 477 bits (1227), Expect = e-131, Method: Compositional matrix adjust.
Identities = 231/448 (51%), Positives = 325/448 (72%), Gaps = 6/448 (1%)
Query: 292 VDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINA 351
+D + + ++ ++E +++G ++T I G G+R++ +T F +S++++ L A
Sbjct: 39 MDDGELFLEYCESEMISIDDGTIRTATTDITSGFGLRSVLDTETGFAHSNELNDQALKRA 98
Query: 352 VKSTRSIANQSNGKIKIIKNIKKIKINS-LYSFTDTISSINIREKIKLLERVEKIARLKD 410
++ + +G + + I N LY + + + + LL ++ AR KD
Sbjct: 99 SETVSQLKMGRSGTM----SENPIATNQRLYHPENPLQQGSFSARAHLLHEIDAYARSKD 154
Query: 411 PRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYN 470
RV++V A++SGE+ I I R++ VADIRPLV+L V++I E++GRRE+G+ GCGGRY
Sbjct: 155 KRVVQVSASVSGEWQAIQIIRSNQFRVADIRPLVRLNVSVITEEDGRREVGSYGCGGRYG 214
Query: 471 YNYFTDMILEKC-VSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDF 529
Y+ T L K V ++ +L+N ++KPAPAG M VVLG GWPGILLHEAIGHGLEGDF
Sbjct: 215 YDEITQEHLWKAAVDEALRQSLVNQQSKPAPAGEMDVVLGSGWPGILLHEAIGHGLEGDF 274
Query: 530 NRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYM 589
NRKG+SAFSN +G+RIA+ +T+VD+GT+ANRRGS++IDDEG PTQ TTLI++GIL G++
Sbjct: 275 NRKGTSAFSNLMGQRIAAPGVTVVDDGTIANRRGSLSIDDEGTPTQRTTLIKDGILTGFI 334
Query: 590 QDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSG 649
D +NARLMN + TGN RR+SFA+ PIPRMTNT+M+ GK +++I++ K G+YA NF G
Sbjct: 335 YDRLNARLMNKNSTGNGRRQSFAYTPIPRMTNTFMMEGKDTLKDMIANTKRGIYAVNFGG 394
Query: 650 GQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGV 709
GQVDIT+GKFVFS S+AY+I+NGK+T+PVKGATLIG+GP+ L K++MIGN M+LD GVG
Sbjct: 395 GQVDITSGKFVFSTSEAYMIENGKVTHPVKGATLIGNGPDALTKITMIGNKMELDRGVGT 454
Query: 710 CGKDGQMVPVGVGQPTLKIDSITVGGTN 737
CGK GQ VPVGVGQP LK+ +TVGGT+
Sbjct: 455 CGKAGQGVPVGVGQPALKMSGLTVGGTD 482
>gi|103487800|ref|YP_617361.1| C69 family peptidase [Sphingopyxis alaskensis RB2256]
gi|98977877|gb|ABF54028.1| microcin-processing peptidase 2. Unknown type peptidase. MEROPS
family U62 [Sphingopyxis alaskensis RB2256]
Length = 480
Score = 477 bits (1227), Expect = e-131, Method: Compositional matrix adjust.
Identities = 235/479 (49%), Positives = 327/479 (68%), Gaps = 20/479 (4%)
Query: 266 RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGV 325
R+ L+P DL +K+ + L K D + Y Q+ E++ ++G +KT ++S + G
Sbjct: 13 RADALDP-DLAQKLACEALA-----KADDGELYLQYRATESFGFDDGRLKTADYSTDAGF 66
Query: 326 GVRAISGDKTAFFYSDDISKNTLINAVKSTRSI--ANQSNGKIKIIKNIKKIKINSLYSF 383
G+RA+SG+ T F ++ DIS + + A ++ + A Q++ N LY
Sbjct: 67 GLRAVSGEMTGFAHASDISADAIRRAAETLALLDPAKQAHAAPPPRTN------RHLYDE 120
Query: 384 TDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPL 443
+ + + +K+ L ++V+ AR +DPRV++V L+G + V+ I R DG + DIRPL
Sbjct: 121 ANPLDLVPFAKKVALCQQVDAAARARDPRVVQVSVALAGSWSVVEIVRADGFLATDIRPL 180
Query: 444 VQLFVTIIVEKNGRREIGNSGCGGRYNYNY-FTDMILEKCVSNSVNSALINLEAKPAPAG 502
V+L V+I+VE+NGRRE G G GGRY Y++ F + + + +++ AL+NL A APAG
Sbjct: 181 VRLNVSIVVEENGRRESGYFGLGGRYMYDHLFEEAQWNRAIDEALSQALVNLRAVDAPAG 240
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL---- 558
V+LGPGWPG+LLHEA+GHGLEGDFNRKG+SAFS IG+R+A+ +T+VD+G +
Sbjct: 241 EFTVLLGPGWPGVLLHEAVGHGLEGDFNRKGTSAFSGRIGERVAAPGVTVVDDGAMESPV 300
Query: 559 -ANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
RRGS++IDDEG PT T LIE+GILKGYMQD +NARLM + TGN RRESFAH P+P
Sbjct: 301 GGGRRGSLSIDDEGTPTGETVLIEDGILKGYMQDRLNARLMGVEPTGNGRRESFAHAPMP 360
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNT+M G+ P E++S VKNG++A +F GGQVDI +GKFVFS ++AY I+NGK+
Sbjct: 361 RMTNTFMRGGRDDPAELLSRVKNGIFAKSFGGGQVDIVSGKFVFSCTEAYKIENGKLGDS 420
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
+KGATLIG GP++L KV+ IGNDM +D G+GVCGK GQ VP GVGQPTL + +TVGGT
Sbjct: 421 IKGATLIGDGPSVLTKVTGIGNDMAIDEGIGVCGKAGQSVPAGVGQPTLLVSGLTVGGT 479
>gi|359398762|ref|ZP_09191778.1| TldD protein [Novosphingobium pentaromativorans US6-1]
gi|357600000|gb|EHJ61703.1| TldD protein [Novosphingobium pentaromativorans US6-1]
Length = 472
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 229/447 (51%), Positives = 313/447 (70%), Gaps = 7/447 (1%)
Query: 292 VDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINA 351
D + Y QF E + ++G +KT ++S + G G+R +SG+ T F ++++IS I
Sbjct: 30 CDDGELYLQFMATEAFGFDDGRLKTADYSRDAGFGLRGVSGEMTGFAHANEISA-AAIRR 88
Query: 352 VKSTRSIANQSNGKIKIIKNIKKIKINS-LYSFTDTISSINIREKIKLLERVEKIARLKD 410
T + + + GK + K N LY+ + + EK+KLLE ++ AR +D
Sbjct: 89 AGETLQLLDPATGK----RAAPPQKSNRHLYTDASPLDLVGFGEKVKLLETIDAAARARD 144
Query: 411 PRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYN 470
PRV +V A+LSG + V+ I R DG + D+RPLV+L V+I+ E NGRRE G+ G GGR+
Sbjct: 145 PRVAQVSASLSGSWSVVEIVRADGFVATDVRPLVRLNVSIVAESNGRRETGSFGMGGRWL 204
Query: 471 YN-YFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDF 529
Y+ F + + ++ ALINLE+ APAG M V+LGPGWPG+LLHEAIGHGLEGDF
Sbjct: 205 YDDLFKPENWNRAIDTALERALINLESVDAPAGEMTVLLGPGWPGVLLHEAIGHGLEGDF 264
Query: 530 NRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYM 589
NRKG+SAF+ IG+R+ + +TIVD+G++ RRGS+ IDDEG PT+ T LIE+G+LKGYM
Sbjct: 265 NRKGTSAFTGRIGERVGAPGVTIVDDGSIMGRRGSLTIDDEGTPTRETVLIEDGVLKGYM 324
Query: 590 QDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSG 649
QD +NARLM + TGN RRE++AH P+PRMTNT+M +G+ PEE+++ + NG+YA NF G
Sbjct: 325 QDRLNARLMGVEPTGNGRRENYAHAPLPRMTNTFMKSGQDDPEELLARIGNGIYAKNFGG 384
Query: 650 GQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGV 709
GQVDI +GKFVFS ++AY + NGK+ P+KGATLIG GP++L +V IGNDM LD GVG+
Sbjct: 385 GQVDIVSGKFVFSCTEAYKVNNGKLGAPIKGATLIGDGPSVLTRVKGIGNDMALDEGVGM 444
Query: 710 CGKDGQMVPVGVGQPTLKIDSITVGGT 736
CGK GQ VP GVGQP+L I+ +TVGGT
Sbjct: 445 CGKGGQSVPAGVGQPSLLIEGLTVGGT 471
>gi|334139815|ref|YP_004533013.1| TldD protein [Novosphingobium sp. PP1Y]
gi|333937837|emb|CCA91195.1| TldD protein [Novosphingobium sp. PP1Y]
Length = 472
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 229/449 (51%), Positives = 313/449 (69%), Gaps = 7/449 (1%)
Query: 290 NKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLI 349
D + Y QF E + ++G +KT ++S + G G+R +SG+ T F ++++IS I
Sbjct: 28 QACDDGELYMQFMATEAFGFDDGRLKTADYSRDAGFGLRGVSGEMTGFAHANEISA-AAI 86
Query: 350 NAVKSTRSIANQSNGKIKIIKNIKKIKINS-LYSFTDTISSINIREKIKLLERVEKIARL 408
T + + + GK + K N LY+ + + EK+KLLE ++ AR
Sbjct: 87 RRAGETLQLLDPATGK----RAAPPQKSNRHLYTDASPLDLVGFGEKVKLLETIDAAARA 142
Query: 409 KDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGR 468
+DPRV +V A+LSG + V+ I R DG + D+RPLV+L V+I+ E NGRRE G+ G GGR
Sbjct: 143 RDPRVAQVSASLSGSWSVVEIVRADGFVATDVRPLVRLNVSIVAESNGRRETGSFGMGGR 202
Query: 469 YNYN-YFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEG 527
+ Y+ F + ++ ALINLE+ APAG M V+LGPGWPG+LLHEAIGHGLEG
Sbjct: 203 WLYDDLFKPENWNHAIDTALERALINLESVDAPAGEMTVLLGPGWPGVLLHEAIGHGLEG 262
Query: 528 DFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKG 587
DFNRKG+SAF+ IG+R+ + +TIVD+G++ RRGS+ IDDEG PT+ T LIE+G+LKG
Sbjct: 263 DFNRKGTSAFTGRIGERVGAPGVTIVDDGSIMGRRGSLTIDDEGTPTRETVLIEDGVLKG 322
Query: 588 YMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNF 647
YMQD +NARLM + TGN RRE++AH P+PRMTNT+M +G+ PEE+++ + NG+YA NF
Sbjct: 323 YMQDRLNARLMGVEPTGNGRRENYAHAPLPRMTNTFMKSGEDDPEELLARIGNGIYAKNF 382
Query: 648 SGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGV 707
GGQVDI +GKFVFS ++AY ++NGK+ P+KGATLIG GP++L +V IGNDM LD GV
Sbjct: 383 GGGQVDIVSGKFVFSCTEAYKVENGKLGAPIKGATLIGDGPSVLTRVKGIGNDMALDEGV 442
Query: 708 GVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
G+CGK GQ VP GVGQP+L I+ +TVGGT
Sbjct: 443 GMCGKGGQSVPAGVGQPSLLIEGLTVGGT 471
>gi|392382829|ref|YP_005032026.1| peptidase U62, modulator of DNA gyrase [Azospirillum brasilense
Sp245]
gi|356877794|emb|CCC98644.1| peptidase U62, modulator of DNA gyrase [Azospirillum brasilense
Sp245]
Length = 477
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 241/476 (50%), Positives = 321/476 (67%), Gaps = 5/476 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L + + LD + ++ + + D + Y +++++E+ ++G +K +F
Sbjct: 4 LAVTDDLFFNRAGLDRSRVEGVVADALRG-ADDGELYLEYSQSESLGWDDGKLKAASFDT 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QG G+RAI+ + T F ++ +S++ + A + R++ G +LY
Sbjct: 63 TQGFGLRAIADEATGFAHASSLSEDAIRRAAATVRAV---QAGHAGTFAEPPAGTNRALY 119
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + K+KLL ++ AR KDPRV +V ++SGE+ + I R DG+ VAD+R
Sbjct: 120 IPDNPLPLVPFEAKVKLLAEIDAYARAKDPRVRQVSCSISGEWQAVQIIRADGVRVADLR 179
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNY-NYFTDMILEKCVSNSVNSALINLEAKPAP 500
PLV+L V+++V + R E G G GGR Y +Y V ++ SAL+NL + PAP
Sbjct: 180 PLVRLNVSVVVAEGDRMETGGHGGGGRVTYEHYMQPETWRAFVDEALRSALVNLSSVPAP 239
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG M VVLG GWPGILLHEAIGHGLEGDFNRK +SAF+ +G+RIA+ +TIVD+GT+ N
Sbjct: 240 AGEMTVVLGNGWPGILLHEAIGHGLEGDFNRKKTSAFAGLMGQRIAAPGVTIVDDGTIEN 299
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RGSI +DDEG P QCTTLIE+GIL GYMQD MNARLM M TGN RR+SFA P+PRMT
Sbjct: 300 SRGSITVDDEGTPGQCTTLIEDGILVGYMQDRMNARLMGMRPTGNGRRQSFACHPMPRMT 359
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NT M G + PEEII SVK GLYA NF GGQVDIT+GKFVFSA++AY+I++GK+ VKG
Sbjct: 360 NTVMRPGAYEPEEIIKSVKKGLYAKNFGGGQVDITSGKFVFSANEAYLIEDGKLGPAVKG 419
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
ATLIG+GP+ L +VSMIGND KLDPGVG CGKDGQ VPVGVGQPTL++D +TVGGT
Sbjct: 420 ATLIGNGPDSLTRVSMIGNDTKLDPGVGTCGKDGQGVPVGVGQPTLRLDGLTVGGT 475
>gi|288958067|ref|YP_003448408.1| TldD protein [Azospirillum sp. B510]
gi|288910375|dbj|BAI71864.1| TldD protein [Azospirillum sp. B510]
Length = 477
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/448 (52%), Positives = 316/448 (70%), Gaps = 4/448 (0%)
Query: 290 NKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLI 349
+ D + Y ++ ++E+ ++G +K+ +F QG G+RAI+G+ T + ++ ++S+ +
Sbjct: 31 HSADDGELYLEYAQSESLGWDDGKLKSASFDTTQGFGLRAIAGEATGYAHASNLSEEAIR 90
Query: 350 NAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLK 409
A + R++ G + +LY + + + EK+KLL ++ AR K
Sbjct: 91 RAASTVRAV---QAGHTGTLAEPPAGTNRALYIPDNPLHLVPFEEKVKLLADIDAYARAK 147
Query: 410 DPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRY 469
D RV +V ++SGE+ + I R DG+ VAD+RPLV+L V+++V + R E G G GGR
Sbjct: 148 DERVRQVSCSISGEWQAVQIIRADGVRVADLRPLVRLNVSVVVAEGDRMETGGYGGGGRV 207
Query: 470 NYN-YFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGD 528
Y+ Y V ++ AL+NL + PAPAG M VVLG GWPGILLHEAIGHGLEGD
Sbjct: 208 TYDHYIQPETWRGFVDEALRQALVNLASVPAPAGEMTVVLGSGWPGILLHEAIGHGLEGD 267
Query: 529 FNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGY 588
FNRK +SAFS +G+RIA+ +TIVD+GT+ N RGSI++DDEG P QCTTLIE+GIL G+
Sbjct: 268 FNRKKTSAFSGLLGQRIAAPGVTIVDDGTIENSRGSISVDDEGTPGQCTTLIEDGILVGF 327
Query: 589 MQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFS 648
MQD MNARLM M TGN RR+SFA+ P+PRMTNT M NG P+EII+SVK G+YA NF
Sbjct: 328 MQDRMNARLMGMRPTGNGRRQSFAYNPMPRMTNTVMRNGDHTPDEIIASVKKGIYAKNFG 387
Query: 649 GGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVG 708
GGQVDITNGKFVFSAS+AY+I++GK+ VKGATLIG+GP+ L KVSMIGND +LDPGVG
Sbjct: 388 GGQVDITNGKFVFSASEAYLIEDGKLGPAVKGATLIGNGPDSLTKVSMIGNDSRLDPGVG 447
Query: 709 VCGKDGQMVPVGVGQPTLKIDSITVGGT 736
CGKDGQ VPVGVGQPTL+++ +TVGGT
Sbjct: 448 TCGKDGQGVPVGVGQPTLRLEGLTVGGT 475
>gi|338707842|ref|YP_004662043.1| peptidase U62 modulator of DNA gyrase [Zymomonas mobilis subsp.
pomaceae ATCC 29192]
gi|336294646|gb|AEI37753.1| peptidase U62 modulator of DNA gyrase [Zymomonas mobilis subsp.
pomaceae ATCC 29192]
Length = 478
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 235/473 (49%), Positives = 323/473 (68%), Gaps = 13/473 (2%)
Query: 266 RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGV 325
R LL P D +++ K LG D + Y Q+ +E++ ++G +K ++ G
Sbjct: 15 RPGLLTPDDA-QRLTSKALG-----YCDDGELYLQYGVSESFSFDDGRLKNASYDNQSGF 68
Query: 326 GVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINS-LYSFT 384
G+R +SG+ T F ++ +IS + A ++ R + KI + N LY+
Sbjct: 69 GLRGLSGESTGFAHASEISAEAIQRAGETLRLLD-----PTKISPPSAPSRTNRHLYTDA 123
Query: 385 DTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLV 444
+ ++ EK+ L ++++ AR +DP V +V LS + VI I R DG I DIRPLV
Sbjct: 124 NPLTLKPFSEKVALCQKIDAAARARDPHVCQVSVGLSASWSVIEIIRADGFIAQDIRPLV 183
Query: 445 QLFVTIIVEKNGRREIGNSGCGGRYNYN-YFTDMILEKCVSNSVNSALINLEAKPAPAGI 503
+L ++++VEKNGRRE G G GGRY Y+ F + ++ + ++ SAL+NLEA PAP G
Sbjct: 184 RLNISVVVEKNGRRESGFYGLGGRYLYDPIFEEASWQRGIDMALASALVNLEAVPAPVGE 243
Query: 504 MKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRG 563
M VVLGPGWPG+LLHEA+GHGLEGDFNRKGSS FS IG+++A+ +T++D+G++A+RRG
Sbjct: 244 MPVVLGPGWPGVLLHEAVGHGLEGDFNRKGSSVFSGRIGEKVAADGVTVIDDGSIADRRG 303
Query: 564 SINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTY 623
S++IDDEG PT T LIENGILK YMQD +NARLM M+ TGN RRES+ H P+PRMTNT+
Sbjct: 304 SLSIDDEGTPTSRTVLIENGILKSYMQDRLNARLMGMAPTGNGRRESYVHAPMPRMTNTF 363
Query: 624 MLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATL 683
M G+ P EI+S VK G++A NF GGQVDIT+GKFVFS ++AY I+NG+I P+KGATL
Sbjct: 364 MAAGQEDPAEIMSRVKKGIFAKNFGGGQVDITSGKFVFSCTEAYFIENGRIGAPIKGATL 423
Query: 684 IGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
IG GP +L K++ IGND+ LD GVG+CGK GQ VP GVGQP+L ++ +TVGGT
Sbjct: 424 IGDGPTVLNKIAAIGNDLALDEGVGICGKGGQSVPAGVGQPSLLVEGLTVGGT 476
>gi|402496807|ref|YP_006556067.1| Zn-dependent protease TldD [Wolbachia endosymbiont of Onchocerca
ochengi]
gi|398650080|emb|CCF78250.1| Zn-dependent protease TldD [Wolbachia endosymbiont of Onchocerca
ochengi]
Length = 475
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 247/461 (53%), Positives = 333/461 (72%), Gaps = 13/461 (2%)
Query: 280 LLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFY 339
+ KI+ ++ N + + + +F ++E+ I + ++K + + +G +R T+F
Sbjct: 22 IYKIVNSVLSNS-NCGELFLEFCQSESLIFDNNVLKHIDLNTRRGFSLRVFCESSTSFIC 80
Query: 340 SDDISKNTLINA---VKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKI 396
S +IS+ + +A V+S+ S+ S+ +K K+ K +LY + I+ I++ K+
Sbjct: 81 SSEISEREISHAASIVRSSISLDKTSSTSLK-----KETK--NLYPRINPINEIDLISKM 133
Query: 397 KLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNG 456
+LL+ V + R K+ V +V LSGE+ V+ I ++D + +DIRPLV V +IVEKNG
Sbjct: 134 RLLDEVNEYVRSKNTFVKQVKITLSGEWQVVQIIKDDHRL-SDIRPLVCFNVLVIVEKNG 192
Query: 457 RREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGI 515
R E G +G GGR +Y+ F ++ + +K + ++ AL+NLEA P PAG M VVLGPGWPGI
Sbjct: 193 RTERGFAGHGGRDSYSKFISEKMWKKVANQALEQALVNLEAIPTPAGEMIVVLGPGWPGI 252
Query: 516 LLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQ 575
LLHEA+GHGLEGDFNRKG SAFSN IGK++A+ IT+VD+GTL N RGSI IDDEG
Sbjct: 253 LLHEAVGHGLEGDFNRKGVSAFSNSIGKQVAAGGITVVDDGTLPNLRGSIRIDDEGTAPC 312
Query: 576 CTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEII 635
C LIE+GILKGYMQD MNA+LM M+ TGN RRES+ I +PRMTNTYML GK+ PEEII
Sbjct: 313 CNVLIEDGILKGYMQDHMNAKLMGMNSTGNGRRESYKEITMPRMTNTYMLPGKYTPEEII 372
Query: 636 SSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVS 695
SSVK G+YA NFSGGQVDIT+GKFVFS+S+AY+I+NGK+ P+KGATLIG GP +LKKVS
Sbjct: 373 SSVKRGIYAVNFSGGQVDITSGKFVFSSSEAYLIENGKVIQPIKGATLIGDGPTVLKKVS 432
Query: 696 MIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
M+GND++LDPGVG C KDGQ +P+GVGQPTLK++SITVGGT
Sbjct: 433 MVGNDLRLDPGVGTCLKDGQSIPIGVGQPTLKVNSITVGGT 473
>gi|87198438|ref|YP_495695.1| peptidase U62, modulator of DNA gyrase [Novosphingobium
aromaticivorans DSM 12444]
gi|87134119|gb|ABD24861.1| microcin-processing peptidase 2, Unknown type peptidase, MEROPS
family U62 [Novosphingobium aromaticivorans DSM 12444]
Length = 479
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 232/477 (48%), Positives = 326/477 (68%), Gaps = 16/477 (3%)
Query: 266 RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGV 325
RS LL P D ++ L D + Y QF +E++ ++G +KT ++S + G
Sbjct: 12 RSGLLTPDDA-RRLTRDAL-----TACDDGELYLQFIASESFGFDDGRLKTADYSRDAGF 65
Query: 326 GVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTD 385
G+R +SG+ T F ++++IS + A ++ + + +N + LY+
Sbjct: 66 GLRGVSGEMTGFAHANEISAAAIARAGETLKLLDPAKGQPAPPPRNNNR----HLYTEAS 121
Query: 386 TISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQ 445
+ ++ K++LLE ++ AR +DPRV++V A+L+G + V+ I R DG + D+RPLV+
Sbjct: 122 PLDAVPFEAKVRLLESIDAAARARDPRVVQVSASLAGSWSVVEIVRPDGFVAHDVRPLVR 181
Query: 446 LFVTIIVEKNGRREIGNSGCGGRYNYN-YFTDMILEKCVSNSVNSALINLEAKPAPAGIM 504
L V+I+ EK+GRRE G+ G GGR Y+ F + + +++ AL+NLE+ APAG M
Sbjct: 182 LNVSIVAEKDGRRETGSFGIGGRRLYDDLFAPETWSRAIDEALSQALVNLESVAAPAGEM 241
Query: 505 KVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTL-----A 559
V+LGPGWPG+LLHEA+GHGLEGDFNRKG+SAFS IG+R+A+ +T++D+GTL
Sbjct: 242 TVLLGPGWPGVLLHEAVGHGLEGDFNRKGTSAFSGRIGQRVAAPGVTVIDDGTLLGVNGQ 301
Query: 560 NRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRM 619
RRGS++IDDEG PTQ LIE+GILKGY+QD +NARLM ++ TGN RRES+AH P+PRM
Sbjct: 302 GRRGSLSIDDEGTPTQENILIEDGILKGYIQDRLNARLMGVAPTGNGRRESYAHAPMPRM 361
Query: 620 TNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVK 679
TNT+M G P E++S VKNG++A +F GGQVDIT+GKFVFS ++AY I+NG++ P+K
Sbjct: 362 TNTFMRAGNDDPAELLSRVKNGIFAKSFGGGQVDITSGKFVFSCTEAYHIENGRLGAPIK 421
Query: 680 GATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
GATLIG GP L KV+ IGND+ LD GVGVCGK GQ VP GVGQPTL ++ +TVGGT
Sbjct: 422 GATLIGDGPTCLTKVTGIGNDLALDEGVGVCGKGGQSVPAGVGQPTLLVEGLTVGGT 478
>gi|336233357|ref|YP_004590103.1| Zn-dependent protease [Buchnera aphidicola (Cinara tujafilina)]
gi|335345298|gb|AEH39844.1| predicted Zn-dependent protease [Buchnera aphidicola (Cinara
tujafilina)]
Length = 484
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 245/487 (50%), Positives = 335/487 (68%), Gaps = 19/487 (3%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L + +ILL P ++ EK ++ L + K+D+ D YFQ K+E+WILE I+K G I
Sbjct: 2 LKLVSNILLYPNNIYEKDIVITLDKILSKKIDFGDIYFQLKKSESWILENKIIKKGTLCI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKN--IKKIKIN- 378
++G G+R I+ TAF YS+ I+ N + + ++N + I +KK +
Sbjct: 62 DEGFGIRTINHSSTAFSYSNCINLNNI-------QKVSNIVCDMLPIFPKTVLKKAYFSD 114
Query: 379 --SLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRND-GL 435
S YS D I ++I +KI LL ++ IAR +DPRV+ V A L+ E++ IL+ D
Sbjct: 115 NISYYSSVDPIEKVSIDKKINLLHMIDNIARKQDPRVVNVNAVLNCEHENILVASTDCSH 174
Query: 436 IVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF------TDMILEKCVSNSVNS 489
+ ADIRPL+ + ++++VE NG+RE G SG GGR+ ++YF D+ +E +V
Sbjct: 175 LSADIRPLIYISISVVVESNGQREKGYSGGGGRFEFSYFFEKHFSGDLRIEYWTKEAVRI 234
Query: 490 ALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKE 549
AL+ L +KPAPAG+ VVLG GWPG+L HEA+GHGLEGDF RK +S F+ G+++AS+
Sbjct: 235 ALVALFSKPAPAGLFSVVLGSGWPGVLFHEAVGHGLEGDFIRKKTSLFTKKKGQKVASEL 294
Query: 550 ITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRE 609
TIVDNGTL N RGSINIDDEG P+Q LIENGILK ++QD +NA LMN TGN RR+
Sbjct: 295 CTIVDNGTLKNLRGSINIDDEGVPSQKNILIENGILKSFLQDKINANLMNTRYTGNGRRQ 354
Query: 610 SFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYII 669
S+AH+P+PRMTNTY++ K E+II SV NG+YA NFSGGQVDIT+G FVFSA++AYII
Sbjct: 355 SYAHLPMPRMTNTYLMPRKMKHEDIIESVNNGIYAVNFSGGQVDITSGNFVFSAAEAYII 414
Query: 670 KNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKID 729
+NGKI YP+KG TLIG G + +SM+GN++K+D G+G CGK+GQ +PV VGQPT+K+D
Sbjct: 415 QNGKIKYPIKGVTLIGSGIKTMNLISMVGNNLKMDDGIGFCGKEGQNIPVCVGQPTVKVD 474
Query: 730 SITVGGT 736
S+TVGGT
Sbjct: 475 SLTVGGT 481
>gi|404251757|ref|ZP_10955725.1| C69 family peptidase [Sphingomonas sp. PAMC 26621]
Length = 476
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 227/448 (50%), Positives = 315/448 (70%), Gaps = 5/448 (1%)
Query: 290 NKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLI 349
K D + Y Q+ K+E + ++G +KT ++ + G G+RA+SG+ TAF +++++S +
Sbjct: 31 GKADDGELYLQYRKSEAFGFDDGRLKTASYDTHSGFGLRAVSGEMTAFAHANELSAAAIK 90
Query: 350 NAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLK 409
A K+ I ++ K + + LY+ D + I +K+ L + ++ AR +
Sbjct: 91 RASKTMALIDPSASPKAAPPRATNR----HLYTDADPLDLIPFADKVNLCQTIDAAARAR 146
Query: 410 DPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRY 469
DPRV +V +L G ++V+ I R DG + DIRPLV+L V+I+VE+NGRRE G+ G GGRY
Sbjct: 147 DPRVAQVSVSLMGNWNVVEIVRADGFMATDIRPLVRLNVSIVVEQNGRRETGSFGIGGRY 206
Query: 470 NYNYFTD-MILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGD 528
Y + + + ++ A++NL++ APAG M V+LGPGWPGILLHEAIGHGLEGD
Sbjct: 207 LYTDLMEPATWNRAIDEALAQAVVNLDSVAAPAGEMTVLLGPGWPGILLHEAIGHGLEGD 266
Query: 529 FNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGY 588
FNRKG+SAFS IG+R+A+ +T+VD+G++A+RRGS++IDDEG PTQ LIE+GILKGY
Sbjct: 267 FNRKGTSAFSGRIGERVAAPGVTVVDDGSIADRRGSLSIDDEGTPTQENVLIEDGILKGY 326
Query: 589 MQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFS 648
+QD +NARLM ++ TGN RRESFAH P+PRMTNT+M G P E++S VK+G++A F
Sbjct: 327 IQDRLNARLMGVAPTGNGRRESFAHAPMPRMTNTFMRGGNDDPAELLSRVKSGIFAKAFG 386
Query: 649 GGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVG 708
GGQVDI +GKFVFS ++AY I+NG+I P+KGATLIG GP+ L KV IGND LD G+G
Sbjct: 387 GGQVDIVSGKFVFSCTEAYRIENGRIGAPIKGATLIGDGPSCLTKVEGIGNDFALDEGIG 446
Query: 709 VCGKDGQMVPVGVGQPTLKIDSITVGGT 736
+CGK GQ VP GVGQPTL + +TVGGT
Sbjct: 447 MCGKGGQSVPAGVGQPTLLVGGLTVGGT 474
>gi|409402396|ref|ZP_11251962.1| C69 family peptidase [Acidocella sp. MX-AZ02]
gi|409129027|gb|EKM98899.1| C69 family peptidase [Acidocella sp. MX-AZ02]
Length = 478
Score = 474 bits (1219), Expect = e-130, Method: Compositional matrix adjust.
Identities = 225/448 (50%), Positives = 311/448 (69%), Gaps = 4/448 (0%)
Query: 290 NKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLI 349
+ D + + ++ ++E+ L++G ++ +F +G G+RA+ G+ + ++ DIS L
Sbjct: 32 DGADDGELFLEYRESESISLDDGRIRAASFDTRRGFGLRAVLGEAAYYAHAGDISAAALG 91
Query: 350 NAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLK 409
A ++ R+ + LY + + E+ LL++++ AR
Sbjct: 92 RAAQTIRAAKAMEQ---SVTAGEPAAAGAPLYVGVNPLGEAPFAERAALLKQIDDFARGA 148
Query: 410 DPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRY 469
D RV++V+A+++GE+ VI I R G VADIRPLV+L +++++E+NG+RE G+ G GGR
Sbjct: 149 DKRVVQVMASIAGEWQVIEIVRAGGARVADIRPLVRLNISVVLEENGKRESGSHGAGGRS 208
Query: 470 NYNYFTDM-ILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGD 528
Y + D + V ++ A +NL A APAG M VVLGPGWPGILLHEAIGHGLEGD
Sbjct: 209 GYGAYIDPNFWQNAVREAIRQAEVNLGAVAAPAGEMPVVLGPGWPGILLHEAIGHGLEGD 268
Query: 529 FNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGY 588
FNRK +SAF+ +G RIA+ +T+VD+GT+ NRRGS+ IDDEG PT T LIE+GIL G+
Sbjct: 269 FNRKQTSAFAGLLGSRIAAPGVTVVDDGTIPNRRGSLTIDDEGTPTSRTVLIEDGILTGF 328
Query: 589 MQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFS 648
+QD NARLMNM TGN RR+S+AH P+PRMTNT M G+ E++I+SVK GLYA NF
Sbjct: 329 IQDRQNARLMNMRATGNGRRQSYAHAPMPRMTNTIMQGGQDKKEDMIASVKRGLYAVNFG 388
Query: 649 GGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVG 708
GGQVDIT+GKFVFSAS+AY+I++GK+T PVKGATLIG+GP+ L KV MIG+D LDPG+G
Sbjct: 389 GGQVDITSGKFVFSASEAYLIEDGKVTSPVKGATLIGNGPDALTKVEMIGDDPALDPGIG 448
Query: 709 VCGKDGQMVPVGVGQPTLKIDSITVGGT 736
CGK+GQ VPVGVGQPT+K+ +T+GGT
Sbjct: 449 TCGKNGQGVPVGVGQPTIKLSGLTIGGT 476
>gi|58696720|ref|ZP_00372266.1| tldD protein [Wolbachia endosymbiont of Drosophila simulans]
gi|58537102|gb|EAL60220.1| tldD protein [Wolbachia endosymbiont of Drosophila simulans]
Length = 425
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 251/431 (58%), Positives = 320/431 (74%), Gaps = 12/431 (2%)
Query: 310 EEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINA---VKSTRSIANQSNGKI 366
E I+K + + +G G+R+ D T+F S +IS+ + NA VKS+ S+ N++N I
Sbjct: 1 EGNILKHMDLNTRRGFGLRSFCEDSTSFVCSSEISEKEIRNAASMVKSSVSL-NKTN-SI 58
Query: 367 KIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDV 426
+ + K SLYS + I+ +++ KIKLL V + R K+ V +V LSGE+ V
Sbjct: 59 NLNEETK-----SLYSRINPINEMDVNSKIKLLNEVNEYVRSKNNCVKQVKITLSGEWQV 113
Query: 427 ILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSN- 485
+ I + D + +DIRPLV+ V +IVEK+GR E G++G GGR +Y+ F K V+N
Sbjct: 114 VQIIKGDHRL-SDIRPLVRFNVLVIVEKDGRTERGSAGHGGRDSYSKFISEKKWKEVANQ 172
Query: 486 SVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRI 545
++ AL+NLEA P PAG M VVLGPGWPGILLHEA+GHGLEGDFNRK SAFSN +GK++
Sbjct: 173 ALEQALVNLEAIPTPAGEMTVVLGPGWPGILLHEAVGHGLEGDFNRKKVSAFSNSVGKQV 232
Query: 546 ASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGN 605
A+ +IT+VD+GTL N RGSI++DDEG P LIE+GILKGYMQD MNA+LM +S TGN
Sbjct: 233 AASDITVVDDGTLPNLRGSISVDDEGTPPSYNILIEDGILKGYMQDHMNAKLMGVSPTGN 292
Query: 606 ARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASK 665
RR+S+ + +PRMTNTYML GK+ P+EIISSVK GLYA NF GGQVDIT+GKFVFS+S+
Sbjct: 293 GRRDSYKEVIMPRMTNTYMLPGKYTPKEIISSVKKGLYAVNFGGGQVDITSGKFVFSSSE 352
Query: 666 AYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPT 725
AY+I+NGKIT PVKGATLIG GP +LKKVSM+GND+KLDPGVG C KDGQ VPVGVGQPT
Sbjct: 353 AYLIENGKITQPVKGATLIGDGPTVLKKVSMVGNDLKLDPGVGTCSKDGQNVPVGVGQPT 412
Query: 726 LKIDSITVGGT 736
LK+D+ITVGGT
Sbjct: 413 LKVDAITVGGT 423
>gi|197104007|ref|YP_002129384.1| Zn-dependent protease [Phenylobacterium zucineum HLK1]
gi|196477427|gb|ACG76955.1| predicted Zn-dependent protease [Phenylobacterium zucineum HLK1]
Length = 476
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 222/470 (47%), Positives = 321/470 (68%), Gaps = 5/470 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
+LE +D +ILG D + + + +++E+++ ++G +K+ + +G G+R
Sbjct: 10 ILESAGVDSGRAREILGQALAG-ADDGELFVERSESESFLFDDGRLKSAAYDATEGFGLR 68
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
++G+ + ++ +IS+ + A S A G + + LY+ D ++
Sbjct: 69 VVAGETAGYAHASEISEAAIRRAADSA---ALAKRGYEGVAAEGPRATNAKLYAEDDPLA 125
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
S + +K+ LL+ ++ AR +DPR+ +V+ +L+GE + I R DG ++ D+RPL ++ V
Sbjct: 126 SPDFSDKVALLQEIDAWARARDPRIAQVMVSLAGERRTVEIVRADGRLIRDVRPLSRINV 185
Query: 449 TIIVEKNGRREIGNSGCGGRYNYN-YFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
+ VE++GRRE G +G GGR + + T + V ++ AL+NL+A P PAG M VV
Sbjct: 186 QVTVERDGRRENGYTGAGGRAGFETWITADKWQAQVDEALRQALVNLDAVPCPAGEMDVV 245
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LGPGW G+LLHEA+GHGLEGDFNRKG+SAFS IG+R+A+ +T+ D+G +A RRGS+ +
Sbjct: 246 LGPGWNGVLLHEAVGHGLEGDFNRKGTSAFSGKIGERVAAPGVTVFDDGAIAGRRGSLTV 305
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PTQ T LIE+G+L GYM D M+ARLM +S TGNARR+S+AH+P+PRMTNT ML G
Sbjct: 306 DDEGTPTQRTLLIEDGVLVGYMHDRMSARLMGLSPTGNARRQSYAHMPMPRMTNTGMLGG 365
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
EE+I+S K GLY NF GGQVDITNGKFVF ++AY+I++GK+T PVKGATLIG G
Sbjct: 366 DTPREEMIASTKRGLYCANFGGGQVDITNGKFVFQCTEAYLIEDGKLTTPVKGATLIGDG 425
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
P+ L +V+M+G+D DPG+GVCGK GQ VPVGVGQP+LKI +TVGGT+
Sbjct: 426 PSALTRVTMLGDDFAFDPGIGVCGKSGQSVPVGVGQPSLKITGLTVGGTS 475
>gi|307728046|ref|YP_003911259.1| peptidase U62 modulator of DNA gyrase [Burkholderia sp. CCGE1003]
gi|307588571|gb|ADN61968.1| peptidase U62 modulator of DNA gyrase [Burkholderia sp. CCGE1003]
Length = 494
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 225/488 (46%), Positives = 331/488 (67%), Gaps = 4/488 (0%)
Query: 250 NCILISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWIL 309
NC+L S ++ N AR LL+ +DE L L D+AD Y + E W L
Sbjct: 9 NCLL-SLDDVR--NAARRCLLDRNGVDEAQLASALSLAMGAGSDFADVYLSDSVRETWSL 65
Query: 310 EEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKI- 368
E G V+ G++ + G G+R + G++T F S I + L+ R + K
Sbjct: 66 EGGAVRGGSYRRDSGFGLRVMKGEETTFASSQKIDASALVRVASQLRMNGESAQAKASTQ 125
Query: 369 IKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVIL 428
K+ + SLY ++S++ EKI LL++V+++AR D RV++V A+L Y+ +
Sbjct: 126 SKDTAMPERGSLYISASPLASVDASEKITLLQKVDQLARKHDARVVEVGASLQAVYESVW 185
Query: 429 ITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVN 488
+T +DG+ D+RPL+ L+V++ V+ R E +SG GGRY+ + ++ ++ V+ V+
Sbjct: 186 VTCHDGMSAGDVRPLLNLWVSVRVKSGTRMEHTHSGMGGRYSLSEWSGDVVASFVTKLVD 245
Query: 489 SALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASK 548
+A+I L+A+PAPAG M VV+GPGW G+LLHEA+GHGLE D R+G+SAF+ IG+ +A K
Sbjct: 246 AAIIKLDARPAPAGSMSVVVGPGWNGVLLHEAVGHGLEADGIRRGTSAFAGRIGETVAHK 305
Query: 549 EITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARR 608
+TIVD+G++ RRGS+N+DDEG PTQ T LIE+G L+G+MQD ++ARLM ++ TGN RR
Sbjct: 306 GVTIVDDGSMFGRRGSLNVDDEGYPTQRTVLIEDGALRGFMQDSLSARLMGVAQTGNGRR 365
Query: 609 ESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYI 668
ES+ +P+PRMTNT+MLNG P+EI++SV NG+Y GGQVD+T+G+FVF AS+A++
Sbjct: 366 ESYTCLPMPRMTNTFMLNGNHEPDEIVASVTNGIYVAGLEGGQVDVTSGQFVFEASEAFL 425
Query: 669 IKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKI 728
I++GKIT P+KGAT+ G+GP ++K+S+IGND++LD G +CGK GQ VPVGVGQPTL++
Sbjct: 426 IEDGKITAPIKGATITGNGPETIRKISLIGNDLELDSGKAMCGKAGQSVPVGVGQPTLRV 485
Query: 729 DSITVGGT 736
D +TVGGT
Sbjct: 486 DDMTVGGT 493
>gi|357032358|ref|ZP_09094297.1| TldD protein [Gluconobacter morbifer G707]
gi|356414130|gb|EHH67778.1| TldD protein [Gluconobacter morbifer G707]
Length = 509
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 231/449 (51%), Positives = 319/449 (71%), Gaps = 6/449 (1%)
Query: 292 VDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINA 351
VD + + ++ +NE L++G +++ +FS + G G+RA+ G +TAF ++D+IS++ L A
Sbjct: 64 VDDGELFLEYRENEGIALDDGTIRSASFSTSSGFGLRAVLGTETAFAHADEISQDALARA 123
Query: 352 VKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDP 411
V + ++ G+ + + LY + + + + +L ++ AR D
Sbjct: 124 VTTVGAV---RQGRSATMAPGPRPTNQRLYGDSRPLEKTDFAARAAVLTEIDTYARGLDT 180
Query: 412 RVIKVIANLSGEYDVILITR--NDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRY 469
RV++V A++S E+ + I R + G +AD+RPLV+L V++IVEK+GRRE G+ G GGR+
Sbjct: 181 RVVQVSASVSSEWQAVQIMRRADAGGRMADLRPLVRLNVSVIVEKDGRRESGSCGQGGRF 240
Query: 470 NYN-YFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGD 528
+ T V ++ AL+NLEA PAPAG M VVLGPGWPGILLHEA+GHGLEGD
Sbjct: 241 ALDRLLTPETWRGAVDEALRQALVNLEAGPAPAGEMDVVLGPGWPGILLHEAVGHGLEGD 300
Query: 529 FNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGY 588
FNRKG+S+FS +GKR+A+ +T++D+GTL RRGS++IDDEG PT T LIE+GIL GY
Sbjct: 301 FNRKGTSSFSGMVGKRVAAPGVTVIDDGTLPERRGSLSIDDEGTPTGRTVLIEDGILTGY 360
Query: 589 MQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFS 648
+QD +NARLM ++ TGN RRES+AH P+PRMTNT ML G EE+I S K GLYA NF
Sbjct: 361 LQDRLNARLMGVAPTGNGRRESYAHAPMPRMTNTVMLEGDATTEEMIRSTKRGLYAVNFG 420
Query: 649 GGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVG 708
GGQVDIT+GKFVFSAS+AY+I++GK+T PVKGATLIG+G + + ++SMIG+D+ LDPG+G
Sbjct: 421 GGQVDITSGKFVFSASEAYLIEDGKVTRPVKGATLIGNGADAMNQISMIGSDVALDPGIG 480
Query: 709 VCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
CGK GQ VPVGVGQPTLK+ +TVGGT
Sbjct: 481 TCGKAGQGVPVGVGQPTLKLAGLTVGGTG 509
>gi|381168594|ref|ZP_09877788.1| putative peptidase TldD [Phaeospirillum molischianum DSM 120]
gi|380682454|emb|CCG42606.1| putative peptidase TldD [Phaeospirillum molischianum DSM 120]
Length = 477
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 236/476 (49%), Positives = 327/476 (68%), Gaps = 11/476 (2%)
Query: 265 ARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQG 324
A +L LD L +I+ + D + + ++ ++E +L++G +K+ NF G
Sbjct: 7 AHDLLFVRAGLDRSRLTRIVADALAG-ADDGELFLEYRQSETVVLDDGRIKSANFDTAHG 65
Query: 325 VGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFT 384
G+RA++G+ + + D+S+ + A + ++ +G + + LY+
Sbjct: 66 FGLRAVAGEAHGYAHGSDLSEEAIARAAATVTAVRGGHSGHLAAAPVGTGRR---LYADF 122
Query: 385 DTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLV 444
+ ++ + K+ LL ++ AR +DPRV +V A+LSG + + I R+DG + ADIRP+V
Sbjct: 123 NPLTQMGFEAKVALLGEIDAYARARDPRVTQVSASLSGSWQAVAILRSDGSLAADIRPMV 182
Query: 445 QLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSAL----INLEAKPAP 500
+L V+I++ + R E G G GGR Y+ T + NSV+ AL +NL + PAP
Sbjct: 183 RLNVSIVLSEGERMETGGHGLGGRVGYDSVTSAATWR---NSVDEALRQADVNLGSIPAP 239
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG M VVLGPGWPG++LHEA+GHGLEGDFNRK +SAFS IG+R+A++ +T+VD+GTL +
Sbjct: 240 AGEMPVVLGPGWPGVMLHEAVGHGLEGDFNRKETSAFSGRIGERVAARGVTVVDDGTLPD 299
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGSI+IDDEG P+ T LIE+GIL GY+QD +NARLM ++ TGN RR+SFAH PIPRMT
Sbjct: 300 RRGSISIDDEGTPSGRTVLIEDGILTGYLQDRLNARLMGVAATGNGRRQSFAHAPIPRMT 359
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NT+ML G P EI++SVK GLYA NF GGQVDITNGKFVFSAS+AY+I+NGKI VKG
Sbjct: 360 NTFMLGGDADPAEILASVKRGLYAVNFGGGQVDITNGKFVFSASEAYLIENGKIGPAVKG 419
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
ATLIG+GP+ + +V M+GND+ LDPG+G CGKDGQ VPVGVGQPTL+ID +TVGGT
Sbjct: 420 ATLIGNGPDAMSRVMMVGNDLALDPGIGTCGKDGQGVPVGVGQPTLRIDGLTVGGT 475
>gi|417838975|ref|ZP_12485189.1| Protein tldD [Haemophilus haemolyticus M19107]
gi|341955790|gb|EGT82240.1| Protein tldD [Haemophilus haemolyticus M19107]
Length = 456
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 227/448 (50%), Positives = 316/448 (70%), Gaps = 5/448 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN + LL P +L K LL I M +DYAD YFQ +++E+W+LE+GI+K G F I
Sbjct: 2 LNQVSNTLLTPSNLSTKALLNIFDMMSHRNIDYADLYFQLSQDESWVLEDGIIKEGGFHI 61
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
++GVGVRA+SGDKT F Y+D I+ +L ++ + IA G + + + Y
Sbjct: 62 DRGVGVRAVSGDKTGFAYADQINLASLQQCAEAVKGIAQVKQGNLISPSAFNVVNPIARY 121
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + + S+ +KI+LL V++ AR +D RV +V A+LS Y+ +L+ DG + ADIR
Sbjct: 122 AAINPLESLTKEKKIELLHLVDRTARAEDHRVTRVSASLSSVYEEVLVMATDGTLAADIR 181
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEA 496
PLV+L ++++VE+NG+RE G+ G GGR+ ++F D+ + +V AL+NL A
Sbjct: 182 PLVRLSISVLVEENGKRERGSCGSGGRFGLDWFFEVVDGDIRAVRFAKEAVRQALVNLSA 241
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG+M VVLG GWPG+LLHEA+GHGLEGDFNRK SS F+ IG+++ S TIVD+G
Sbjct: 242 IAAPAGLMPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSLFTGKIGEQVTSPLCTIVDDG 301
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ NRRGS IDDEG P+QC LI++GIL+GYMQD MNARLM ++ TGN RRES+AH+P+
Sbjct: 302 TIENRRGSSTIDDEGVPSQCNVLIKDGILQGYMQDKMNARLMGVAPTGNGRRESYAHLPM 361
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ +++I+SV+ G+YA +F GGQVDIT+GKFVFS S+AY+I+ GKIT
Sbjct: 362 PRMTNTYMLAGQSQFDDLIASVEQGIYAPHFGGGQVDITSGKFVFSTSEAYLIEKGKITK 421
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLD 704
PVKGATLIG G +++K+SM+ + +LD
Sbjct: 422 PVKGATLIGSGIEVMQKISMVADKSELD 449
>gi|262276810|ref|ZP_06054603.1| protein that suppresses inhibitory activity of CsrA [alpha
proteobacterium HIMB114]
gi|262223913|gb|EEY74372.1| protein that suppresses inhibitory activity of CsrA [alpha
proteobacterium HIMB114]
Length = 472
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 231/449 (51%), Positives = 321/449 (71%), Gaps = 4/449 (0%)
Query: 290 NKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLI 349
N D + + + +K+E+ +L++G +K +F + G G RA+ DKTAF +S+ ISK +L
Sbjct: 24 NNCDDGELFLENSKSESLVLDDGKIKNTSFDSSLGFGFRAVQDDKTAFCHSNIISKKSLN 83
Query: 350 NAVKSTRSIANQSNGKIKIIKNIKKIKIN-SLYSFTDTISSINIREKIKLLERVEKIARL 408
+A S ++N +NG K+ K + N LY + I + +EK++LL++++ R
Sbjct: 84 DA--SQNLVSNMNNGSKKVQKQSNPKRTNVKLYEDKNPIENKPFKEKVELLKKIDDYVRQ 141
Query: 409 KDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGR 468
K+ + +V A+ GE+ + I ++D + D RPLV+ V++++E+NG++E G+ G GGR
Sbjct: 142 KNSNIKQVTASFFGEHQSVEIIKSDNQVYKDQRPLVRFNVSVMMERNGKKETGSYGTGGR 201
Query: 469 YNY-NYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEG 527
+Y NY + ++ A +NL+++PAPAG MKVVLGPGWPGI+LHEAIGHGLEG
Sbjct: 202 MDYENYLGSDNWKTICDEAIRQAEVNLDSRPAPAGEMKVVLGPGWPGIILHEAIGHGLEG 261
Query: 528 DFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKG 587
DFNRK +SAF N +G++IA + +T+VD+GT+A+RRGS+ IDDEG PT LIENGILK
Sbjct: 262 DFNRKKTSAFHNLVGQKIAHENVTVVDDGTIASRRGSLTIDDEGTPTSRNVLIENGILKN 321
Query: 588 YMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNF 647
+MQD MNA+LM + TGN RRESF + P+PRMTNT+M+NG EE+I SV G+YA +F
Sbjct: 322 FMQDRMNAKLMKVEPTGNGRRESFEYAPMPRMTNTFMINGNHTQEEMIKSVGKGIYAVSF 381
Query: 648 SGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGV 707
GGQVDITNGKFVFS ++AY I +GKI P+KG TLIG+GP+IL KVSM+GNDMKLDPG+
Sbjct: 382 GGGQVDITNGKFVFSCTEAYEINDGKIGAPLKGVTLIGNGPDILTKVSMVGNDMKLDPGI 441
Query: 708 GVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
G CGK GQ VPVGVGQP++ +D ITVGGT
Sbjct: 442 GTCGKAGQWVPVGVGQPSILVDQITVGGT 470
>gi|33519761|ref|NP_878593.1| TldD protein [Candidatus Blochmannia floridanus]
gi|33504106|emb|CAD83368.1| TldD protein [Candidatus Blochmannia floridanus]
Length = 490
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 244/459 (53%), Positives = 324/459 (70%), Gaps = 12/459 (2%)
Query: 291 KVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLIN 350
K+DY+D Y Q +ENWILE+ I+K+G++ I QGVG+R I G++T F Y++ ++ ++L
Sbjct: 32 KIDYSDVYCQLCFHENWILEDSIIKSGSYDITQGVGIRVIVGEQTGFSYTNQLTLDSLKL 91
Query: 351 AVKSTRSIANQSNGKIKI-IKNIKKI-----KINSLYSFTDTISSINIREKIKLLERVEK 404
++K+ SI N N I+N K I K +S+Y + +S ++ EKI+LL RV+K
Sbjct: 92 SMKNAISIVNNDNNLSLNSIQNNKYIFSPESKRSSVYPNVNPLSDMSNEEKIELLMRVDK 151
Query: 405 IARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSG 464
IAR ++ V V A LSG Y+ ILIT DG D+RPL++L + + VE++GR+E G SG
Sbjct: 152 IARSENSCVKTVQATLSGLYEQILITATDGTFAIDMRPLIRLSILVQVERDGRQEQGFSG 211
Query: 465 CGGRYNYNYF------TDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLH 518
G R Y+Y ++ ++ SV L NLE+ APAG M V+LGPGWPGIL+H
Sbjct: 212 GGCRSGYSYLLNNFIKEELCIDYWAKKSVQMGLYNLESVEAPAGTMPVILGPGWPGILIH 271
Query: 519 EAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTT 578
EA+GHGLE DFNRKGSS FS IG ++AS TIVD+ T RGS+ IDDEG P Q
Sbjct: 272 EAVGHGLEADFNRKGSSVFSKKIGMQVASDLCTIVDDATWVGSRGSLAIDDEGTPGQYNI 331
Query: 579 LIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSV 638
LI+NGILKGYMQD +NA+LM S TGN RR S+A +PIPRMTNTYML G+F PEEII+SV
Sbjct: 332 LIQNGILKGYMQDKLNAKLMGSSSTGNGRRASYADLPIPRMTNTYMLPGEFTPEEIINSV 391
Query: 639 KNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIG 698
G+YATNF GGQVDIT+GKFVFSAS+A++I+ G IT +KG TLIG G +++ +SM+G
Sbjct: 392 DFGIYATNFGGGQVDITSGKFVFSASEAFLIEKGHITKSIKGVTLIGSGIEVMQSISMVG 451
Query: 699 NDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
ND+KLD G+G+C K+GQ +PV VGQPT+K++ ITVGG N
Sbjct: 452 NDLKLDSGIGICVKNGQHIPVNVGQPTIKLNKITVGGIN 490
>gi|349701843|ref|ZP_08903472.1| DNA gyrase modulator [Gluconacetobacter europaeus LMG 18494]
Length = 486
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 219/438 (50%), Positives = 312/438 (71%), Gaps = 4/438 (0%)
Query: 292 VDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINA 351
+D + + ++ ++E L+EG++++ F + G G+RA+ +T F +SDDIS++ + A
Sbjct: 42 MDDGELFLEYRESEAISLDEGVIRSATFDTSSGFGLRAVLEAETGFAHSDDISESAIRRA 101
Query: 352 VKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDP 411
++ I +G + + + LY + + + +L ++ AR +DP
Sbjct: 102 GETVSQIRAGRSGTLAVGPRSTN---HRLYPDINPLEEGAFASRAAMLSELDAYARARDP 158
Query: 412 RVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNY 471
RV++V+A++S E+ I I R DG +ADIRPLV++ V+++VE++GRRE G G GGRY+Y
Sbjct: 159 RVVQVMASISAEWQAIQIIRPDGQRMADIRPLVRMNVSVVVEQDGRRESGGHGLGGRYSY 218
Query: 472 N-YFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFN 530
+ + + V ++ AL+NL+A+PAPAG M+VVLG GWPGILLHEA+GHGLEGDFN
Sbjct: 219 TRLLSPQVWQGAVDEALRMALVNLDARPAPAGEMEVVLGAGWPGILLHEAVGHGLEGDFN 278
Query: 531 RKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQ 590
RKG+SAF+ +GKR+A+ +T+VD+GTL RRGS+ IDDEG PT T +IE+GIL GY+Q
Sbjct: 279 RKGTSAFAGLMGKRVAAPGVTVVDDGTLPERRGSLTIDDEGTPTGRTVMIEDGILTGYLQ 338
Query: 591 DIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGG 650
D +NARLM +S TGN RR+S+AH P+PRMTNT ML G +++I S K GLYA NF GG
Sbjct: 339 DRLNARLMGVSPTGNGRRQSYAHAPMPRMTNTIMLGGDATTDDMIRSTKRGLYAVNFGGG 398
Query: 651 QVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVC 710
QVDIT+GKFVF+AS+AY+I++GKIT PV+GATLIG+G + + +V+MIG + LDPG+G C
Sbjct: 399 QVDITSGKFVFAASEAYMIEDGKITTPVRGATLIGNGADAMTQVTMIGGEPALDPGIGTC 458
Query: 711 GKDGQMVPVGVGQPTLKI 728
GK GQ VPVGVGQPTLK+
Sbjct: 459 GKSGQGVPVGVGQPTLKM 476
>gi|407975804|ref|ZP_11156707.1| peptidase U62 modulator of DNA gyrase [Nitratireductor indicus
C115]
gi|407428665|gb|EKF41346.1| peptidase U62 modulator of DNA gyrase [Nitratireductor indicus
C115]
Length = 472
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 221/469 (47%), Positives = 326/469 (69%), Gaps = 5/469 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
L++ FD + L ++ + K D + + ++++ E + ++G +KT NF+ +QG G+R
Sbjct: 6 LIDAFDCSPERLRSLVQDTIKG-ADDGELFLEYSEGEALVYDDGRLKTANFNTDQGFGLR 64
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A++G+ + + +S ++S+ L A + ++ + +G + + + LY + IS
Sbjct: 65 AVAGETSGYAHSSELSEAALKRAADAVSTVKDGYSGTLAAGPSGTNQR---LYGEENPIS 121
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
+ EK KLL+ ++ R +DPRV +V A+L+ + + I R DG I DIRPLV++ V
Sbjct: 122 APGFEEKAKLLQEIDAWVRARDPRVRQVTASLAASWQQVEILRADGQIARDIRPLVRVNV 181
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
+++V + R+E G+ G GGR ++ F + + S ++ AL+NLEA P+PAG +V
Sbjct: 182 SVMVGEGDRQETGSYGMGGRKSFGEFLAEDSWQFAASEALRQALVNLEAVPSPAGTFDIV 241
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
L GWPG++LHEA+GHGLEGDFNRK +SAF+ +G+++A+K +T+VD+GT++ RRGS+ I
Sbjct: 242 LANGWPGVMLHEAVGHGLEGDFNRKKTSAFAGLMGQQVAAKGVTVVDDGTISERRGSLTI 301
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG P+ LIE+G L GYMQD NARLM M TGN RRES+AH P+PRMTNTYM NG
Sbjct: 302 DDEGTPSARNVLIEDGKLVGYMQDRQNARLMGMRATGNGRRESYAHEPMPRMTNTYMTNG 361
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
PEEII+SVKNG+YA +F GGQVDIT+GKFVF ++AY+I++GK+T P+KGA LIG+G
Sbjct: 362 DKTPEEIIASVKNGIYAVSFGGGQVDITSGKFVFGCTEAYMIEDGKVTQPIKGAMLIGNG 421
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+ + +VSM+GNDM LD G+G+CGK GQ VPVGVGQP L++D +TVGGT
Sbjct: 422 PDAMHRVSMVGNDMTLDNGIGMCGKAGQGVPVGVGQPHLRMDQMTVGGT 470
>gi|328545020|ref|YP_004305129.1| peptidase U62 modulator of DNA gyrase [Polymorphum gilvum
SL003B-26A1]
gi|326414762|gb|ADZ71825.1| Peptidase U62 modulator of DNA gyrase [Polymorphum gilvum
SL003B-26A1]
Length = 474
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/469 (48%), Positives = 321/469 (68%), Gaps = 5/469 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LLE L + ++ + D + + ++ ++E + + G +K+ ++ QG G+R
Sbjct: 8 LLEASGLGLETARRLTADALSG-ADDGELFLEYRQSEGLVFDNGRLKSASYDTAQGFGLR 66
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+ G+ + +S +IS+ L A + ++ +G + LY+ + +
Sbjct: 67 AVVGEAAGYAHSGEISEGALKRAADAVAAVRTGHSGSYAAAPAGTNQR---LYTDENPLG 123
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
+ + K+KLL+ ++ AR KDPRV +V A+++G + V+ I R DG V DIRP+V+L +
Sbjct: 124 APSFEAKVKLLQEIDAYARAKDPRVRQVTASIAGSWQVVDILRADGHRVRDIRPMVRLSI 183
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
++ R E G+ GCGGR + F T + V ++ AL+NLEA PAPAG VV
Sbjct: 184 NVVAGSGERMESGSYGCGGREGFARFVTPERWQAGVDEALRQALVNLEAVPAPAGTFDVV 243
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LGPGWPGILLHEA+GHGLEGDFNRK +SAF+ +G+R+A+ +TIVD+GT+A+RRGS+ +
Sbjct: 244 LGPGWPGILLHEAVGHGLEGDFNRKKTSAFAGLMGQRVAAPGVTIVDDGTIADRRGSLTV 303
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PT TTLIE+GIL GYMQD NARLM M+ TGN RR+S+AHIP+PRMTNT ML G
Sbjct: 304 DDEGTPTSRTTLIEDGILVGYMQDRQNARLMGMAPTGNGRRQSYAHIPMPRMTNTIMLGG 363
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
P EI++SV++G+YA +F GGQVDIT+GKFVFS ++AY I+NG++ PVKGA LIG+G
Sbjct: 364 DKDPAEILASVRDGIYAVSFGGGQVDITSGKFVFSCTEAYRIENGRVGAPVKGAMLIGNG 423
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+ L +V+MIGNDM LDPG+G CGK GQ VPVGVGQP+++I+++TVGGT
Sbjct: 424 PDALTRVAMIGNDMALDPGLGTCGKQGQGVPVGVGQPSMRINALTVGGT 472
>gi|395491284|ref|ZP_10422863.1| C69 family peptidase [Sphingomonas sp. PAMC 26617]
Length = 476
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/448 (50%), Positives = 314/448 (70%), Gaps = 5/448 (1%)
Query: 290 NKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLI 349
K D + Y Q+ K+E + ++G +KT ++ + G G+RA+SG+ TAF +++++S +
Sbjct: 31 GKADDGELYLQYRKSEAFGFDDGRLKTASYDTHSGFGLRAVSGEMTAFAHANELSAAAIK 90
Query: 350 NAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLK 409
A ++ I ++ K + + LY+ D + I +K+ L + ++ AR +
Sbjct: 91 RASETMALIDPSASPKAAPPRATNR----HLYTDADPLDLIPFADKVNLCQTIDAAARAR 146
Query: 410 DPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRY 469
DPRV +V +L G ++V+ I R DG + DIRPLV+L V+I+VE+NGRRE G+ G GGRY
Sbjct: 147 DPRVAQVSVSLMGNWNVVEIVRADGFMATDIRPLVRLNVSIVVEQNGRRETGSFGIGGRY 206
Query: 470 NYNYFTD-MILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGD 528
Y + + + ++ A++NL++ APAG M V+LGPGWPGILLHEAIGHGLEGD
Sbjct: 207 LYTDLMEPATWNRAIDEALAQAVVNLDSVAAPAGEMTVLLGPGWPGILLHEAIGHGLEGD 266
Query: 529 FNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGY 588
FNRKG+SAFS IG+R+A+ +T+VD+G++ +RRGS++IDDEG PTQ LIE+GILKGY
Sbjct: 267 FNRKGTSAFSGRIGERVAAPGVTVVDDGSIVDRRGSLSIDDEGTPTQENVLIEDGILKGY 326
Query: 589 MQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFS 648
+QD +NARLM ++ TGN RRESFAH P+PRMTNT+M G P E++S VK+G++A F
Sbjct: 327 IQDRLNARLMGVAPTGNGRRESFAHAPMPRMTNTFMRGGNDDPAELLSRVKSGIFAKAFG 386
Query: 649 GGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVG 708
GGQVDI +GKFVFS ++AY I+NGKI P+KGATLIG GP+ L KV IGND LD G+G
Sbjct: 387 GGQVDIVSGKFVFSCTEAYRIENGKIGAPIKGATLIGDGPSCLTKVEGIGNDFALDEGIG 446
Query: 709 VCGKDGQMVPVGVGQPTLKIDSITVGGT 736
+CGK GQ VP GVGQPTL + +TVGGT
Sbjct: 447 MCGKGGQSVPAGVGQPTLLVGGLTVGGT 474
>gi|73666733|ref|YP_302749.1| microcin-processing peptidase 2 [Ehrlichia canis str. Jake]
gi|72393874|gb|AAZ68151.1| microcin-processing peptidase 2, Unknown type peptidase, MEROPS
family U62 [Ehrlichia canis str. Jake]
Length = 477
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 236/446 (52%), Positives = 315/446 (70%), Gaps = 5/446 (1%)
Query: 292 VDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINA 351
D + + + +E E+GI+K +F+ QG G+R+ + TAF S +I++ + NA
Sbjct: 34 ADGGELFLEMCISEALGFEDGILKYADFNSRQGFGLRSFCKELTAFVCSSEITEQEISNA 93
Query: 352 VKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDP 411
+SI + NG + + K +LY T+ + SI K+KLL+ VE K P
Sbjct: 94 AALVKSINSSGNGGVIHLNKTKP----ALYPETNPLQSITFDIKVKLLQEVESYLHTKSP 149
Query: 412 RVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNY 471
V +V LSG++ ++ I DG V DIRPLV+ V +I+EK+GR+E G++G GGR +Y
Sbjct: 150 YVKQVKTALSGQWQMVHIILPDGNKVYDIRPLVRFNVCVILEKDGRKESGSAGHGGRASY 209
Query: 472 NYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFN 530
F D + ++ AL+NLE+ P PAG M VVLGPGWPG+LLHEA+GHGLEGDFN
Sbjct: 210 EEFIGDGKWQVIADEALRQALVNLESIPTPAGEMTVVLGPGWPGVLLHEAVGHGLEGDFN 269
Query: 531 RKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQ 590
RK SAFSN IGK++A+ +T+VD+GT++ RRGSIN+DDEG P+ LI++GIL YMQ
Sbjct: 270 RKKVSAFSNSIGKKVAADGVTVVDDGTISGRRGSINVDDEGVPSSYNVLIQDGILVNYMQ 329
Query: 591 DIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGG 650
D MNA LM + TGN RR+S+ + IPRMTNTYML G +HPEEIISSVK G+YA +FSGG
Sbjct: 330 DRMNANLMGTTSTGNGRRQSYQDVVIPRMTNTYMLPGNYHPEEIISSVKKGIYAVHFSGG 389
Query: 651 QVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVC 710
QVDIT+GKFVFSAS+ Y+I++GK+T+PVKGAT+IG+GP++L KVSMIGND+ LD G+G C
Sbjct: 390 QVDITSGKFVFSASEGYLIEDGKVTHPVKGATIIGNGPDVLTKVSMIGNDLALDSGIGTC 449
Query: 711 GKDGQMVPVGVGQPTLKIDSITVGGT 736
K+GQ +PVGVGQPTLKID+I VGGT
Sbjct: 450 SKNGQDLPVGVGQPTLKIDNIVVGGT 475
>gi|347739738|ref|ZP_08870936.1| peptidase U62 modulator of DNA gyrase [Azospirillum amazonense Y2]
gi|346916847|gb|EGX99437.1| peptidase U62 modulator of DNA gyrase [Azospirillum amazonense Y2]
Length = 483
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 218/477 (45%), Positives = 320/477 (67%), Gaps = 3/477 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
++ AR ++L P LDE L + L D+AD +F+ TK+ W L+ G V G+FSI
Sbjct: 7 MDWARRLILHPNQLDEVELSRAL-EQLAAGADFADMFFESTKSREWRLDNGKVSAGSFSI 65
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKI--IKNIKKIKINS 379
QG+G RA+ GD+ +F ++ D+ + +A ++ +++ G + + + ++ +
Sbjct: 66 GQGLGSRAVRGDQVSFAHTSDLRPEAIRSAHRTVQALTRLGGGAVAAPSVSLVPQVTDHG 125
Query: 380 LYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVAD 439
LYS D ++S N+ ++LLERV+ AR P V +V A+LS + V+LI DG +VAD
Sbjct: 126 LYSRQDPLASANLLSWVQLLERVDMQARAAHPAVRQVNASLSSSHRVVLIANTDGQLVAD 185
Query: 440 IRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPA 499
RP+ +LF+ +++E+ G R G++G GGRY TD + +S +V A +NL+A+PA
Sbjct: 186 ARPVTRLFIHVVLERAGTRAQGSAGVGGRYGLEGLTDAAVASVISQAVRVATVNLDARPA 245
Query: 500 PAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLA 559
P G+M VVLGPG+ G+L HEA+GHGLEGD +RKG SAF+ +G+RIA + +T++D+G+L
Sbjct: 246 PGGVMPVVLGPGYAGVLFHEAVGHGLEGDHHRKGLSAFAGRMGERIAPETVTVLDDGSLP 305
Query: 560 NRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRM 619
R GS+ +DDEG P Q LIENG+L G MQD +NARLMNM TGNARR+S+AH+P+PRM
Sbjct: 306 GRLGSLGVDDEGTPGQKNALIENGVLTGLMQDRLNARLMNMRPTGNARRQSYAHLPMPRM 365
Query: 620 TNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVK 679
TNT++L G+ P +I++SV G+YA GGQVDIT+G+F F+A +AY+I++GKIT PV
Sbjct: 366 TNTFLLAGQEDPNDIVASVARGIYAPRMGGGQVDITSGRFNFTAVEAYLIEDGKITAPVN 425
Query: 680 GATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
G TL+G G L+ + +G+D LD G+ CGK GQ V V VGQPTL+ID + V G+
Sbjct: 426 GVTLVGVGHEALRHIRAVGHDWALDEGIATCGKAGQTVSVSVGQPTLRIDEMVVSGS 482
>gi|58584984|ref|YP_198557.1| Zn-dependent protease TldD [Wolbachia endosymbiont strain TRS of
Brugia malayi]
gi|58419300|gb|AAW71315.1| Predicted Zn-dependent protease, TldD ortholog [Wolbachia
endosymbiont strain TRS of Brugia malayi]
Length = 475
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 258/461 (55%), Positives = 327/461 (70%), Gaps = 13/461 (2%)
Query: 280 LLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFY 339
+ KI+ N N D + + +F ++E+ + + I+K + + +G G+R+ D T+F
Sbjct: 22 IYKIVNNALNNS-DGGELFLEFCQSESLVFDNNILKHMDLNTRRGFGLRSFCKDSTSFVC 80
Query: 340 SDDISKNTLINA---VKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKI 396
S +IS+ + NA VKS+ S N++N I + + KK LY + I+ I++ KI
Sbjct: 81 SSEISEKEISNAASIVKSSVSF-NKTN-SINLNEGTKK-----LYLRINPINEIDLNLKI 133
Query: 397 KLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNG 456
KLL V + R KD V +V LSGE+ VI I + D + +D+RPLV V +IVEKNG
Sbjct: 134 KLLNEVNEYVRSKDNCVKQVKITLSGEWQVIQIIKGDHRL-SDVRPLVHFNVLVIVEKNG 192
Query: 457 RREIGNSGCGGRYNYNYFTDMILEKCVSN-SVNSALINLEAKPAPAGIMKVVLGPGWPGI 515
R E G++G GGR +Y+ F K V+N ++ ALINLEA P PAG M VVLGPGWPGI
Sbjct: 193 RIERGSAGHGGRDSYSKFISEKGWKRVANQALEQALINLEAIPTPAGEMTVVLGPGWPGI 252
Query: 516 LLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQ 575
LLHEA+GHGLEGDFNRKG SAFS+ IGK++A+ +TIVD+GTL N RGSI+IDDEG
Sbjct: 253 LLHEAVGHGLEGDFNRKGVSAFSHSIGKQVAASGVTIVDDGTLPNLRGSISIDDEGTLPG 312
Query: 576 CTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEII 635
LIE GILKGY+ D MNA+LM ++ TGN RRE++ + +PRMTNTYML GK PEEII
Sbjct: 313 YNVLIEGGILKGYIHDHMNAKLMGVNPTGNGRRENYKEVTMPRMTNTYMLPGKHTPEEII 372
Query: 636 SSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVS 695
SSVK GLYA NF GGQVDIT+GKFVFS+S+AY+I+NGKI PVKGATLIG GP +LKKVS
Sbjct: 373 SSVKKGLYAVNFGGGQVDITSGKFVFSSSEAYLIENGKIAQPVKGATLIGDGPTVLKKVS 432
Query: 696 MIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
MIGND+KLDPGVG C K GQ VPVGVGQPTLK+DSIT+GGT
Sbjct: 433 MIGNDLKLDPGVGTCSKGGQNVPVGVGQPTLKVDSITIGGT 473
>gi|326386072|ref|ZP_08207696.1| peptidase U62, modulator of DNA gyrase [Novosphingobium
nitrogenifigens DSM 19370]
gi|326209297|gb|EGD60090.1| peptidase U62, modulator of DNA gyrase [Novosphingobium
nitrogenifigens DSM 19370]
Length = 481
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 230/478 (48%), Positives = 325/478 (67%), Gaps = 16/478 (3%)
Query: 266 RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGV 325
R LL P D ++ LG D + Y QF +E++ ++G +KT ++S + G
Sbjct: 13 RPGLLTPDDA-RRLTAAALG-----ACDDGELYLQFIASESFGFDDGRLKTADYSRDAGF 66
Query: 326 GVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTD 385
G+R +SG+ T F ++++IS + A ++ + + + + G+ + LY+
Sbjct: 67 GLRGVSGEMTGFAHANEISAAAIARAGETLK-LLDPAKGQPALAPRSSN---RHLYTDAS 122
Query: 386 TISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQ 445
+ + K++LLE ++ AR +DPRV++V A+LS + VI I R DG + D+RPLV+
Sbjct: 123 PLDGVPFEAKVRLLETIDAAARARDPRVVQVSASLSASWSVIEIVRADGFLAQDVRPLVR 182
Query: 446 LFVTIIVEKNGRREIGNSGCGGRYNYN-YFTDMILEKCVSNSVNSALINLEAKPAPAGIM 504
L V+I+ E NGRRE G+ G GGR Y+ F + + ++ AL+NLE+ APAG M
Sbjct: 183 LNVSIVAESNGRRETGSFGIGGRRLYDDLFQPETWNRAIDTALAQALVNLESVAAPAGEM 242
Query: 505 KVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN---- 560
V+LGPGWPG+LLHEA+GHGLEGDFNRKG+SAFS IG+R+A+ +T+VD+GTL++
Sbjct: 243 TVLLGPGWPGVLLHEAVGHGLEGDFNRKGTSAFSGRIGQRVAAPGVTVVDDGTLSSDHGG 302
Query: 561 -RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRM 619
RRGS++IDDEG PTQ LIE+GILKGYMQD +NARLM + TGN RRE++AH P+PRM
Sbjct: 303 ARRGSLSIDDEGTPTQENVLIEDGILKGYMQDRLNARLMGVEPTGNGRRENYAHAPMPRM 362
Query: 620 TNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVK 679
TNT+M G P E++S VKNG++A +F GGQVDIT+GKFVF+ ++AY ++NGK+ P+K
Sbjct: 363 TNTFMRAGNDDPAELLSRVKNGIFAKSFGGGQVDITSGKFVFTCTEAYRVENGKLGAPIK 422
Query: 680 GATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
GATLIG GP +L +V IGND+ LD GVG+CGK GQ VP GVGQP+L ++ +TVGGT
Sbjct: 423 GATLIGDGPTVLTRVVGIGNDLALDEGVGICGKGGQSVPAGVGQPSLLVEGLTVGGTG 480
>gi|349686290|ref|ZP_08897432.1| DNA gyrase modulator [Gluconacetobacter oboediens 174Bp2]
Length = 486
Score = 470 bits (1210), Expect = e-129, Method: Compositional matrix adjust.
Identities = 217/438 (49%), Positives = 310/438 (70%), Gaps = 4/438 (0%)
Query: 292 VDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINA 351
+D + + ++ ++E L+EG++++ F + G G+RA+ +T F +SDDIS++ + A
Sbjct: 42 MDDGELFLEYRESEGISLDEGVIRSATFDTSSGFGLRAVLETETGFAHSDDISESAIRRA 101
Query: 352 VKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDP 411
++ I G+ + + + LY + + + +L + AR +DP
Sbjct: 102 AETVSQI---RAGRSGTLAAGPRSTNHRLYPDINPLEEGAFASRAAMLSELNAYARARDP 158
Query: 412 RVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNY 471
RV++V+A++S E+ + I R DG +ADIRPLV++ V+++VE +GRRE G G GGRY+Y
Sbjct: 159 RVVQVMASISAEWQAVQIIRPDGQRMADIRPLVRMNVSVVVEHDGRRESGGHGLGGRYSY 218
Query: 472 N-YFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFN 530
+ + + V ++ AL+NL+A+PAPAG M+VVLG GWPGILLHEA+GHGLEGDFN
Sbjct: 219 TRLLSPQVWKGAVDEALRMALVNLDARPAPAGEMEVVLGAGWPGILLHEAVGHGLEGDFN 278
Query: 531 RKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQ 590
RKG+SAF+ +GKR+A+ +T+VD+GTL RRGS+ IDDEG PT T +IE+GIL GY+Q
Sbjct: 279 RKGTSAFAGLMGKRVAAPGVTVVDDGTLPERRGSLTIDDEGTPTGRTVMIEDGILTGYLQ 338
Query: 591 DIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGG 650
D +NARLM ++ TGN RR+S+AH P+PRMTNT ML G +++I S K GLYA NF GG
Sbjct: 339 DRLNARLMGVAPTGNGRRQSYAHAPMPRMTNTIMLGGDATTDDMIRSTKRGLYAVNFGGG 398
Query: 651 QVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVC 710
QVDIT+GKFVF+AS+AY+I++GKIT PV+GATLIG+G + + +V+MIG + LDPG+G C
Sbjct: 399 QVDITSGKFVFAASEAYLIEDGKITTPVRGATLIGNGADAMTRVTMIGGEPALDPGIGTC 458
Query: 711 GKDGQMVPVGVGQPTLKI 728
GK GQ VPVGVGQPTLK+
Sbjct: 459 GKSGQGVPVGVGQPTLKM 476
>gi|347530231|ref|YP_004836979.1| peptidase U62 family protein [Sphingobium sp. SYK-6]
gi|345138913|dbj|BAK68522.1| peptidase U62 family protein [Sphingobium sp. SYK-6]
Length = 480
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 221/472 (46%), Positives = 325/472 (68%), Gaps = 6/472 (1%)
Query: 266 RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGV 325
R+ L LD + ++ K D + Y Q+ +E++ ++G +KT ++S + G
Sbjct: 12 RAFLYRDGALDPEGARRLTAEALKGCED-GELYLQYMASESFGFDDGRLKTADYSTDAGF 70
Query: 326 GVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTD 385
G+R ++G+ T F +++DIS+ + A ++ + + G + + LY+ +
Sbjct: 71 GLRGVTGEMTGFAHANDISEPAIRRAAETLKLLDPARQGMAPPPQRTNR----HLYTDAN 126
Query: 386 TISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQ 445
+ + +K+ L+ +++ AR +DPRV++V A L+G + V+ I R DG + D+RPLV+
Sbjct: 127 PLDLVPFAKKVDLMAKIDAAARARDPRVVQVSAALAGSWSVVEIVRADGFMATDVRPLVR 186
Query: 446 LFVTIIVEKNGRREIGNSGCGGRYNYN-YFTDMILEKCVSNSVNSALINLEAKPAPAGIM 504
L V+II+E+NGRRE G G GGRY Y+ F D ++ + ++ A +NL + AP G M
Sbjct: 187 LNVSIIMEENGRRETGYFGLGGRYLYDDLFEDATWQRAIDEALAQAQVNLRSVNAPVGEM 246
Query: 505 KVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGS 564
V+LGPGWPG++LHEA+GHGLEGDFNRKG+SAFS IG+R+A+ +T+VD+G++ RRGS
Sbjct: 247 TVLLGPGWPGVMLHEAVGHGLEGDFNRKGTSAFSGRIGQRVAAPGVTVVDDGSIQARRGS 306
Query: 565 INIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYM 624
++IDDEG PTQ T LIE+GIL+GYMQD +NARLM ++ TGN RRES+AH P+PRMTNT+
Sbjct: 307 LSIDDEGTPTQETVLIEDGILRGYMQDRLNARLMGVAPTGNGRRESYAHAPMPRMTNTFA 366
Query: 625 LNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLI 684
G PEE++S VK+G++A +F GGQVDI +GKFVFS ++AY ++NGK+ P+KGATLI
Sbjct: 367 RAGNDDPEELLSRVKSGIFAKSFGGGQVDIVSGKFVFSCTEAYKVENGKLGDPIKGATLI 426
Query: 685 GHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
G GP L +V IGND+ LD G+G+CGK+GQ VP GVGQPTL ++ +TVGGT
Sbjct: 427 GDGPTALNRVIGIGNDLALDEGIGMCGKNGQGVPAGVGQPTLLLEGLTVGGT 478
>gi|94971786|ref|YP_593834.1| microcin-processing peptidase 2 [Candidatus Koribacter versatilis
Ellin345]
gi|94553836|gb|ABF43760.1| microcin-processing peptidase 2 [Candidatus Koribacter versatilis
Ellin345]
Length = 475
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 236/472 (50%), Positives = 329/472 (69%), Gaps = 2/472 (0%)
Query: 266 RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGV 325
+ + + L E+ + K LG DYAD YF++ + L+E +VK+ + I+ G
Sbjct: 3 KQFFFQKYGLTEQNVEKYLGAALSAGGDYADLYFEYLTTTSISLDESMVKSASQGISAGC 62
Query: 326 GVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTD 385
GVR ++G++T + Y+DD++ +++A K+ IA+ K I+ + K LY T
Sbjct: 63 GVRVVAGERTGYAYTDDLAPEKILHAAKTAALIAS-GPAKTPIVNANELRKKADLYPITS 121
Query: 386 TISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQ 445
+ ++ K++L++R ++ AR D R+ +V + + E IL+ +DG D++PL +
Sbjct: 122 GVLGSDVLGKLELVKRSDEAARSYDSRIQEVRVSYADELRKILVIGSDGTFAEDVQPLSR 181
Query: 446 LFVTIIVEKNGRREIGNSGCGGRYNYNYFT-DMILEKCVSNSVNSALINLEAKPAPAGIM 504
+ V I + + G++G GGR YF + E + A+I L+A+ APAG M
Sbjct: 182 MSVFCIAKNDLGSARGSAGGGGRVGSEYFEGEASPEHFAKEAARQAIIQLDAREAPAGEM 241
Query: 505 KVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGS 564
+VVLGPGWPGILLHEAIGHGLE DFNRK +SAF+ +G+R+AS++ T+VDNGT+ +RRGS
Sbjct: 242 EVVLGPGWPGILLHEAIGHGLEADFNRKKTSAFAGLMGQRVASEKCTVVDNGTMPSRRGS 301
Query: 565 INIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYM 624
+N+DDEGNPT T LIENGILKGY+ D ++ARLM M+ TGN RRES+ HIP+PRMTNTYM
Sbjct: 302 LNVDDEGNPTNNTVLIENGILKGYLTDKLSARLMGMANTGNGRRESYEHIPMPRMTNTYM 361
Query: 625 LNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLI 684
L G+ PE+II SVK G+YA NF GGQVDITNGKFVF+AS+AY+I+NG++T P+KGATLI
Sbjct: 362 LAGQDDPEDIIKSVKYGVYAVNFGGGQVDITNGKFVFAASEAYLIENGQVTAPLKGATLI 421
Query: 685 GHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
G+GP++L +VSM+GND+KLD GVG CGKDGQ VPVGVG PTLK+D +TVGGT
Sbjct: 422 GNGPDVLTRVSMVGNDLKLDEGVGTCGKDGQSVPVGVGIPTLKVDRLTVGGT 473
>gi|402820364|ref|ZP_10869931.1| hypothetical protein IMCC14465_11650 [alpha proteobacterium
IMCC14465]
gi|402511107|gb|EJW21369.1| hypothetical protein IMCC14465_11650 [alpha proteobacterium
IMCC14465]
Length = 474
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 228/464 (49%), Positives = 317/464 (68%), Gaps = 5/464 (1%)
Query: 275 LDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDK 334
LD+ + ++ N D + + + T +E++ + ++ NF ++G G+RA+ +
Sbjct: 13 LDQNLAQRLTENALAG-ADDGELFMEHTLSESFSFDNNRLRAANFDTSRGFGLRAVKDET 71
Query: 335 TAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIRE 394
+ +S D+S+ + A + + + +G I + SLY+ + + +
Sbjct: 72 AGYAHSTDLSETAIKRAASALTPVISGHSG---TISDAPAKTETSLYTNANPLDGEGFSD 128
Query: 395 KIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEK 454
K+K+LE + AR KD RV +V LSGE+ + I R DG V D+RPLV++ V+I+ +
Sbjct: 129 KVKILEEINAYARAKDNRVRQVSIGLSGEWQAVAIIRPDGQPVFDVRPLVRMDVSIVAGE 188
Query: 455 NGRREIGNSGCGGRYNY-NYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWP 513
R+E G+ G GGR Y + T + V ++ SAL+NL++ PAPAG M VVLGPGWP
Sbjct: 189 GDRQESGHCGRGGRAGYAKWLTPENWQGQVDEALRSALVNLDSVPAPAGEMDVVLGPGWP 248
Query: 514 GILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNP 573
GILLHEA+GHGLEGDFNRK +SAFS+ IG+R+AS +T++D+GTL +RRGS+++DDEG P
Sbjct: 249 GILLHEAVGHGLEGDFNRKKTSAFSDRIGQRVASPGVTVIDDGTLPDRRGSLSVDDEGTP 308
Query: 574 TQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEE 633
T+ T LIE+GIL GYMQD MNARLM M TGN RRESFA P+PRMTNTYML G P E
Sbjct: 309 TEKTVLIEDGILTGYMQDRMNARLMGMQPTGNGRRESFACQPMPRMTNTYMLGGDKDPGE 368
Query: 634 IISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKK 693
I++ VK G+YA +F GGQVDIT+GKFVFS ++AY I+NGK+ P+KGATLIG GP +++
Sbjct: 369 ILADVKKGVYAVSFGGGQVDITSGKFVFSCTEAYQIENGKLGAPIKGATLIGTGPESMQR 428
Query: 694 VSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
+SMIGNDMKLD G+G CGKDGQ VPVGVGQPTL+++ +T+GGT
Sbjct: 429 ISMIGNDMKLDDGIGTCGKDGQGVPVGVGQPTLRLEGLTIGGTG 472
>gi|359793607|ref|ZP_09296352.1| peptidase U62 modulator of DNA gyrase [Mesorhizobium alhagi
CCNWXJ12-2]
gi|359250212|gb|EHK53738.1| peptidase U62 modulator of DNA gyrase [Mesorhizobium alhagi
CCNWXJ12-2]
Length = 470
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 221/469 (47%), Positives = 325/469 (69%), Gaps = 5/469 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL FD+ E L +I+ + + D + + +++++E + + G +KT NFS +QG G+R
Sbjct: 4 LLGQFDVSEDRLRRIVTDTIEG-ADDGELFLEYSESEALMFDNGRLKTANFSTDQGFGLR 62
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A++G+ + + +S ++S+ L+ A + ++ + +G ++ LYS + I+
Sbjct: 63 AVAGEASGYAHSSELSEAALLRASDAVSTVKSGYSG---VLAAAPPRTNRHLYSDENPIA 119
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
S K KLL+ ++ R D RV +V A+L+ + + I R DG +V DIRPLV++ V
Sbjct: 120 SPGFEAKAKLLQEIDAWLRSSDSRVRQVTASLACSWQHVEILRADGQLVRDIRPLVRVNV 179
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
+++V + R+E G G GGR + F + ++ ++ AL+NLEA PAPAG +V
Sbjct: 180 SVMVGEGDRQETGTYGMGGRKGFGEFLVEDSWKRAAGEALRQALVNLEAIPAPAGTFDIV 239
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
L GWPG++LHEA+GHGLEGDFNRK +SAF+ +G+++A+K +T+VD+GT+A RRGS+++
Sbjct: 240 LSSGWPGVMLHEAVGHGLEGDFNRKKTSAFAGLMGQQVAAKGVTVVDDGTIAERRGSLSV 299
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PT T LI++G L GYMQD NARLM M TGN RRES+AH P+PRMTNTYM G
Sbjct: 300 DDEGTPTNRTVLIDDGKLVGYMQDRQNARLMGMGATGNGRRESYAHQPMPRMTNTYMTAG 359
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
P EII+SVKNG+YA +F GGQVDIT+GKFVF ++AY+I++GKIT P+KGA LIG+G
Sbjct: 360 DMEPAEIIASVKNGVYAVSFGGGQVDITSGKFVFGCTEAYMIEDGKITQPIKGAMLIGNG 419
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+ + +V+M+GNDMKLD G+G+CGK GQ VPVGVGQP L+++ +T+GGT
Sbjct: 420 PDAMHRVTMVGNDMKLDTGIGMCGKAGQGVPVGVGQPHLRMNQMTIGGT 468
>gi|383640077|ref|ZP_09952483.1| C69 family peptidase, partial [Sphingomonas elodea ATCC 31461]
Length = 453
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 222/448 (49%), Positives = 314/448 (70%), Gaps = 5/448 (1%)
Query: 290 NKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLI 349
+ + + Y Q+ K+E + ++G +KT + G G+RA+SG+ TAF ++++IS +
Sbjct: 8 GQAEDGELYLQYRKSEAFGFDDGRLKTAAYDTQSGFGLRAVSGETTAFAHANEISAAAIR 67
Query: 350 NAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLK 409
A ++ I GK + + LY+ D + + +K+ L + ++ AR +
Sbjct: 68 RAAETMALIDPAKQGKAPPPQGNNR----HLYTDADPLDLVPFADKVNLCQTIDAAARAR 123
Query: 410 DPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRY 469
DPRV +V +L+G++ V+ + R DG + D+RPLV+L V+++VE+NGRRE G+ G GGR
Sbjct: 124 DPRVKQVSVSLTGQWSVVEVVRADGFVATDVRPLVRLNVSVVVEQNGRRETGSFGTGGRV 183
Query: 470 NYN-YFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGD 528
Y+ F + + ++ AL+NL+A APAG M V+ GPGWPG+LLHEA+GHGLEGD
Sbjct: 184 VYDRLFQPETWNRAIDEALAQALVNLDAVAAPAGDMTVLCGPGWPGVLLHEAVGHGLEGD 243
Query: 529 FNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGY 588
FNRKG+SAFS IG+R+A+ +T+VD+G+L +RRGS++IDDEG PT+ T LIE+GILKGY
Sbjct: 244 FNRKGTSAFSGRIGERVAAPGVTVVDDGSLHDRRGSLSIDDEGTPTRETVLIEDGILKGY 303
Query: 589 MQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFS 648
MQD +NARLM + TGN RRESF H P+PRMTNT+M GK P E+++ VK G+YA +F
Sbjct: 304 MQDRLNARLMGVEPTGNGRRESFQHAPMPRMTNTFMKGGKDDPAELLARVKKGIYAKSFG 363
Query: 649 GGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVG 708
GGQVDI +GKFVFS ++AY+I+NGK+ P+KGATLIG GP +L +V+ IGND LD GVG
Sbjct: 364 GGQVDIVSGKFVFSCTEAYLIENGKLGAPIKGATLIGDGPTVLHRVTGIGNDFALDEGVG 423
Query: 709 VCGKDGQMVPVGVGQPTLKIDSITVGGT 736
+CGK GQ VP GVGQPTL ++ +TVGGT
Sbjct: 424 MCGKGGQSVPAGVGQPTLLVEGLTVGGT 451
>gi|402821385|ref|ZP_10870926.1| TldD protein [Sphingomonas sp. LH128]
gi|402265063|gb|EJU14885.1| TldD protein [Sphingomonas sp. LH128]
Length = 472
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 227/444 (51%), Positives = 319/444 (71%), Gaps = 7/444 (1%)
Query: 295 ADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKS 354
+ + QF +E + ++G +KT ++S + G G+R +SG+ T F ++++IS + A ++
Sbjct: 33 GELFMQFVASEAFGFDDGRLKTADYSRDAGFGLRGVSGEMTGFAHANEISAAAIRRAGET 92
Query: 355 TRSIANQSNGKIKIIKNIKKIKINS-LYSFTDTISSINIREKIKLLERVEKIARLKDPRV 413
R + + + G I+ + N+ LY+ + + EK++LLE ++ AR +DPRV
Sbjct: 93 LR-LLDPATG----IRPAAPQRTNAKLYTDVSPLDLVPFAEKVRLLEMIDAAARARDPRV 147
Query: 414 IKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYN- 472
+V A+LSG + V+ I R DG I D+RPLV+L V+I+ E NGRRE G+ G GGR+ Y+
Sbjct: 148 AQVSASLSGSWSVVEIVRPDGYIATDVRPLVRLNVSIVAESNGRRETGSFGMGGRFLYDD 207
Query: 473 YFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRK 532
F + + ++ +AL+NLE+ APAG V+LGPGWPG++LHEAIGHGLEGDFNRK
Sbjct: 208 LFKPENWNEGIDTALATALVNLESIDAPAGEFPVLLGPGWPGVILHEAIGHGLEGDFNRK 267
Query: 533 GSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDI 592
G+SAFS IG+R+A+ +TIVD+G++ NRRGS+ IDDEG PT+ T LIE+GILKGYMQD
Sbjct: 268 GTSAFSGRIGERVAAPGVTIVDDGSIPNRRGSLTIDDEGTPTRETVLIEDGILKGYMQDR 327
Query: 593 MNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQV 652
+NARLM + TGN RRE++AH P RMTNT+M G +PEE+++ +K G++A NF GGQV
Sbjct: 328 LNARLMGVEPTGNGRRENYAHAPQVRMTNTFMKAGNDNPEELLAGMKKGIFAKNFGGGQV 387
Query: 653 DITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGK 712
DI +GKFVFS ++AY+++NGK+ P+KGATLIG GP++L KV IGND++LD GVGVCGK
Sbjct: 388 DIVSGKFVFSCTEAYMVENGKLGAPIKGATLIGDGPSVLTKVKGIGNDLELDRGVGVCGK 447
Query: 713 DGQMVPVGVGQPTLKIDSITVGGT 736
GQ VP GVGQPTL I+ +TVGGT
Sbjct: 448 GGQSVPAGVGQPTLLIEGLTVGGT 471
>gi|304320210|ref|YP_003853853.1| TldD protein [Parvularcula bermudensis HTCC2503]
gi|303299113|gb|ADM08712.1| TldD protein [Parvularcula bermudensis HTCC2503]
Length = 471
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 227/465 (48%), Positives = 319/465 (68%), Gaps = 7/465 (1%)
Query: 274 DLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGD 333
DL + ++L + D + + QF+++E ++ ++G +KT ++ QG G+RA+ +
Sbjct: 10 DLHQDRTQRLLDDTLTG-CDDGELFLQFSQSEAFVYDDGHLKTASYDTAQGYGLRAVLDE 68
Query: 334 KTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINS-LYSFTDTISSINI 392
TA+ +S D S+ L A +S +I + G I ++ N LYS ++ +
Sbjct: 69 TTAYAHSSDFSEEGLKRAAQSVSAIKSGHGGSIAD----GPVRTNRHLYSDESPLAGLAF 124
Query: 393 REKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIV 452
K+ LL ++ AR KDPRV +V A+L+GE+ V+ I R G IV DIRPLV+L V++
Sbjct: 125 DRKVGLLSEIDAYARAKDPRVRQVSASLTGEWRVVEIVRPGGHIVRDIRPLVRLNVSVTA 184
Query: 453 EKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPG 511
+ R+E G++G GGR Y+ + V ++ AL+NLEA PAPAG M VVLGPG
Sbjct: 185 GEGDRQESGSTGAGGREGYSRLIAPDFWQSQVDEALRRALVNLEAVPAPAGEMPVVLGPG 244
Query: 512 WPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEG 571
W G+LLHEA+GHGLEGDFNRK +SAF+ +G+R+A+ +T++D+GTL RRGS+ +DDEG
Sbjct: 245 WTGVLLHEAVGHGLEGDFNRKKTSAFAGLLGERVAAPGVTVIDDGTLEGRRGSLTVDDEG 304
Query: 572 NPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHP 631
PT+ T LIE+GILKG+MQD +NARL ++ TGN RRESF + P+PRMTNTYML G +
Sbjct: 305 TPTEKTVLIEDGILKGFMQDRLNARLSGVAPTGNGRRESFEYAPMPRMTNTYMLGGAYDQ 364
Query: 632 EEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNIL 691
++I SVK+G++A NFSGGQVDIT+GKFVF+ ++AY I+NG++ P+K LIG GP ++
Sbjct: 365 GDLIESVKDGIFAVNFSGGQVDITSGKFVFNCTEAYKIENGRLGAPLKNVALIGDGPTVM 424
Query: 692 KKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
++ SMIGND LDPGVGVCGK GQ VPVGVGQP+LKID +TVGG
Sbjct: 425 RQASMIGNDFSLDPGVGVCGKAGQGVPVGVGQPSLKIDRLTVGGA 469
>gi|357029691|ref|ZP_09091674.1| peptidase U62 modulator of DNA gyrase [Mesorhizobium amorphae
CCNWGS0123]
gi|355534400|gb|EHH03709.1| peptidase U62 modulator of DNA gyrase [Mesorhizobium amorphae
CCNWGS0123]
Length = 470
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 221/470 (47%), Positives = 323/470 (68%), Gaps = 7/470 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
L+ FD+ + +I+ N D + + +++++E + + G +KT NF+ +QG G+R
Sbjct: 4 LIGQFDISYDRIKQIVAETI-NGADDGELFLEYSESEALMFDNGRLKTANFNTDQGFGLR 62
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKIN-SLYSFTDTI 387
A++G+ + + +S D+S+ +L+ A + ++ +G + + N LY + I
Sbjct: 63 AVAGEASGYAHSSDLSEASLLRAADAVSTVKGGYSGTLAA----APARTNRHLYGEENPI 118
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S + K KLL+ ++ R +DPRV +V A+L+ + + I R DG +V D+RPLV++
Sbjct: 119 PSPSFETKAKLLQEIDAWLRAEDPRVRQVTASLAASWQHVEIVRADGQMVRDVRPLVRIN 178
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKV 506
V+++V R+E G+ G GGR + F + + ++ AL+NLEA PAPAG +
Sbjct: 179 VSVVVGSGDRQESGSYGMGGRKAFGEFLVEESWKHAAKEALRQALVNLEAIPAPAGTFDI 238
Query: 507 VLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSIN 566
VL GWPG++LHEA+GHGLEGDFNRK +SAF+ +G+++A+K +T+VD+GT+A RRGS+
Sbjct: 239 VLSSGWPGVMLHEAVGHGLEGDFNRKKTSAFAGLLGQQVAAKGVTVVDDGTIAERRGSLT 298
Query: 567 IDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLN 626
+DDEG P+ LIE+G L GYMQD NARLM M TGN RRE +AH P+PRMTNTYM +
Sbjct: 299 VDDEGTPSARNVLIEDGKLVGYMQDRQNARLMGMKATGNGRREGYAHQPMPRMTNTYMTS 358
Query: 627 GKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGH 686
G P+EII+SVKNG+YA +F GGQVDIT+GKFVF ++AY+I+NGK+T PVKGA LIG+
Sbjct: 359 GDMEPDEIIASVKNGIYAVSFGGGQVDITSGKFVFGCTEAYMIENGKVTQPVKGAMLIGN 418
Query: 687 GPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
GP+ + +VSMIGNDMKLD G+G+CGK GQ VPVGVGQP L+++ +TVGGT
Sbjct: 419 GPDAMHRVSMIGNDMKLDNGIGMCGKAGQGVPVGVGQPHLRMNQMTVGGT 468
>gi|167895757|ref|ZP_02483159.1| TldD/PmbA family protein [Burkholderia pseudomallei 7894]
Length = 393
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 228/374 (60%), Positives = 301/374 (80%), Gaps = 2/374 (0%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L++A+ ILL P+ LDE +L + L ++F ++VDYAD YFQ T++E W LEEGIVK+G+FSI
Sbjct: 20 LSLAKDILLTPYGLDEALLTRTLADIFTHRVDYADLYFQATRSEAWSLEEGIVKSGSFSI 79
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKI--IKNIKKIKINS 379
+QGVGVRA++G++TAF YSDD+S + A +T++IA GK KI +K +
Sbjct: 80 DQGVGVRAVAGERTAFAYSDDLSPEAIRQAAVATKAIAAAGGGKQKIRAATALKGVSGRD 139
Query: 380 LYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVAD 439
LY D ++S++ K+KLLERVE++AR +DPR+ +V+A L+GEYDV+L+ R+DG + AD
Sbjct: 140 LYLPADPLASLDATAKVKLLERVEQMARGRDPRIKQVMAGLAGEYDVVLVARSDGALAAD 199
Query: 440 IRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPA 499
IRPLV++ VT+I E NGRREIG G GGR++Y YFTD +L + V ++V++AL+NL+A+PA
Sbjct: 200 IRPLVRVSVTVIAEHNGRREIGTGGGGGRFDYGYFTDDVLARYVDDAVHAALVNLDARPA 259
Query: 500 PAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLA 559
PAG M VVLGPGWPG+LLHEAIGHGLEGDFNRKGSSAF+ IG+++A+K +T+VD+GTL
Sbjct: 260 PAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRIGEQVAAKGVTVVDDGTLP 319
Query: 560 NRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRM 619
NRRGS+NIDDEGNPTQCTTLIE+GILKGY+QD +NARLM M +TGNARRES+A +P+PRM
Sbjct: 320 NRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDTLNARLMKMPVTGNARRESYAALPMPRM 379
Query: 620 TNTYMLNGKFHPEE 633
TNTYMLNG P E
Sbjct: 380 TNTYMLNGDKDPRE 393
>gi|383785195|ref|YP_005469765.1| peptidase U62, modulator of DNA gyrase [Leptospirillum ferrooxidans
C2-3]
gi|383084108|dbj|BAM07635.1| putative peptidase U62, modulator of DNA gyrase [Leptospirillum
ferrooxidans C2-3]
Length = 491
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 226/465 (48%), Positives = 306/465 (65%), Gaps = 1/465 (0%)
Query: 273 FDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISG 332
F +L ++ + +D+AD YF+ T +E LEEGIVK I+QG G R ISG
Sbjct: 26 FGASPDVLDSVMNLAAGSHIDFADLYFEHTVSETMSLEEGIVKKAGSHISQGAGARIISG 85
Query: 333 DKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINI 392
+KT F +++I L + + R IA K ++ + LY T +
Sbjct: 86 EKTGFALTEEIDPKMLHLTMATAREIALHGGEGAARSPVGKMVRTHELYPVTKEGLVLPT 145
Query: 393 REKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIV 452
+ +LL ++ AR D RV +V+ +L+ E +L R DG + D+RPL + +T+I
Sbjct: 146 DVRRELLSEADRTARAYDHRVKQVMVSLATEVKSVLTVREDGQLSTDLRPLYRFNITVIA 205
Query: 453 EKNGRREIGNSGCGGRYNYNYFTDM-ILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPG 511
+ R+ G+ G GGR ++ D+ + + A++NL+A+ P+G M VVLGPG
Sbjct: 206 QSEKNRQTGSYGFGGRVPFSDIPDIERIRLGAREAARQAIVNLDARDCPSGTMPVVLGPG 265
Query: 512 WPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEG 571
WPGILLHEA+GHGLEGDFNRKG+SAFS IG+++AS T++D+GT+ RRGS+N+DDEG
Sbjct: 266 WPGILLHEAVGHGLEGDFNRKGTSAFSGRIGEKVASSLCTVIDDGTIPGRRGSLNVDDEG 325
Query: 572 NPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHP 631
PT T LIE GIL+GY+QD NARLM M +TGN RRES+AH+P+PRMTNT ML G P
Sbjct: 326 TPTSRTVLIEKGILRGYLQDRHNARLMGMKVTGNGRRESYAHVPMPRMTNTSMLGGDSDP 385
Query: 632 EEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNIL 691
+EI+ S+ G+YA NF GGQVDIT+GKFVFS S+AY ++ G+I YPV+GATLIG GP +L
Sbjct: 386 KEILESLDRGIYAVNFGGGQVDITSGKFVFSTSEAYYVEKGRILYPVRGATLIGSGPEVL 445
Query: 692 KKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
KVSM+G+DM LD GVG CGKDGQ VPVGVG PT+ ++ +TVGGT
Sbjct: 446 TKVSMVGSDMSLDSGVGTCGKDGQSVPVGVGLPTIMVEELTVGGT 490
>gi|88658109|ref|YP_506979.1| tldD protein [Ehrlichia chaffeensis str. Arkansas]
gi|88599566|gb|ABD45035.1| tldD protein [Ehrlichia chaffeensis str. Arkansas]
Length = 467
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 233/446 (52%), Positives = 318/446 (71%), Gaps = 5/446 (1%)
Query: 292 VDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINA 351
D + + + +E+ LE GI+K +F+ +QG G+R+ + TAF S +I++ + NA
Sbjct: 24 ADGGELFLEMCVSESLGLENGILKYADFNSHQGFGLRSFCKELTAFVCSSEITEQEIENA 83
Query: 352 VKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDP 411
+SI N ++G I + K I LY T+ + ++ K+KLL++V+ K P
Sbjct: 84 AALVKSINNSNSGGIVHLNKAKPI----LYPETNPLQKMDFDLKVKLLQQVDDYLHSKSP 139
Query: 412 RVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNY 471
V +V ++LSG++ ++ I G V D+RPL++ V +I+EK+GR+E G+SG GGR +Y
Sbjct: 140 YVRQVKSSLSGQWQIVYIILPTGDRVYDVRPLIRFNVCVILEKDGRKESGSSGHGGRASY 199
Query: 472 NYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFN 530
F D + ++ AL+NLE+ P PAG M VVLGPGWPG+LLHEA+GHGLEGDFN
Sbjct: 200 EEFIGDGKWQMVADEALRQALVNLESVPTPAGEMTVVLGPGWPGVLLHEAVGHGLEGDFN 259
Query: 531 RKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQ 590
RK SAFS IGK++A+K +T+VD+GT+ RRGSINIDDEG + LI++GIL YMQ
Sbjct: 260 RKKVSAFSTSIGKKVAAKGVTVVDDGTIPGRRGSINIDDEGVSSGYNVLIQDGILVNYMQ 319
Query: 591 DIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGG 650
D MNA LM + TGN RR+S+ + +PRMTNTYML G + PEEII+SVK G+YA +FSGG
Sbjct: 320 DRMNANLMGTTSTGNGRRQSYQDVVMPRMTNTYMLPGSYCPEEIIASVKKGVYAVHFSGG 379
Query: 651 QVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVC 710
QVDIT+GKFVFSAS+ Y+I++GK+T PVKGAT+IG+GP++L KVSM+G+D+KLDPG+G C
Sbjct: 380 QVDITSGKFVFSASEGYLIEDGKVTCPVKGATIIGNGPDVLTKVSMVGDDLKLDPGIGTC 439
Query: 711 GKDGQMVPVGVGQPTLKIDSITVGGT 736
K+GQ VPVGVGQPTLKIDSI VGGT
Sbjct: 440 SKNGQDVPVGVGQPTLKIDSIIVGGT 465
>gi|13476223|ref|NP_107793.1| TldD protein, suppresses inhibitory activity of CsrA [Mesorhizobium
loti MAFF303099]
gi|14026983|dbj|BAB53579.1| TldD [Mesorhizobium loti MAFF303099]
Length = 470
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 221/473 (46%), Positives = 325/473 (68%), Gaps = 13/473 (2%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
L+ FD+ + + +I+ + N D + + +++++E + + G +KT NF+ +QG G+R
Sbjct: 4 LIGQFDISDDRIKQIVADTI-NGADDGELFLEYSESEALMFDNGRLKTANFNTDQGFGLR 62
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKIN-SLYSFTDTI 387
A++G+ + + +S D+S+ +L+ A + ++ +G + + N LY + I
Sbjct: 63 AVAGEASGYAHSSDLSEASLLRAAAAVSTVKGGYSGTLAA----APARTNRHLYGDENPI 118
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S + K KLL+ ++ R +DPRV +V A+L+ + + I R DG +V DIRPLV++
Sbjct: 119 PSPSFEAKAKLLQEIDAWLRAEDPRVRQVTASLAASWQHVEIVRADGQVVRDIRPLVRIN 178
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEK----CVSNSVNSALINLEAKPAPAGI 503
V+++V R+E G+ G GGR F D ++E ++ AL+NLEA PAPAG
Sbjct: 179 VSVVVGDGDRQESGSYGMGGR---KAFGDFLIEDSWKHAAREALRQALVNLEAIPAPAGT 235
Query: 504 MKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRG 563
+VL GWPG++LHEA+GHGLEGDFNRK +SAF+ +G+++A+K +T+VD+GT+ RRG
Sbjct: 236 FDIVLSSGWPGVMLHEAVGHGLEGDFNRKKTSAFAGLLGQQVAAKGVTVVDDGTIPERRG 295
Query: 564 SINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTY 623
S+ +DDEG P+ LIE+G L GYMQD NARLM M TGN RRE +AH P+PRMTNTY
Sbjct: 296 SLTVDDEGTPSARNVLIEDGKLVGYMQDRQNARLMGMKATGNGRREGYAHQPMPRMTNTY 355
Query: 624 MLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATL 683
M +G P+EII+SVKNG+YA +F GGQVDIT+GKFVF ++AY+I+NGK+T P+KGA L
Sbjct: 356 MTSGDMEPDEIIASVKNGIYAVSFGGGQVDITSGKFVFGCTEAYMIENGKVTQPIKGAML 415
Query: 684 IGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
IG+GP+ + +VSM+GNDMKLD G+G+CGK GQ VPVGVGQP L+++ +TVGGT
Sbjct: 416 IGNGPDAMHRVSMVGNDMKLDNGIGMCGKAGQGVPVGVGQPHLRMNQMTVGGT 468
>gi|417393438|ref|ZP_12155944.1| TldD protein, partial [Salmonella enterica subsp. enterica serovar
Minnesota str. A4-603]
gi|353608747|gb|EHC62249.1| TldD protein, partial [Salmonella enterica subsp. enterica serovar
Minnesota str. A4-603]
Length = 416
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/417 (56%), Positives = 312/417 (74%), Gaps = 9/417 (2%)
Query: 327 VRAISGDKT--AFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFT 384
VRAISG+KT F Y+D IS L + ++ R+I + NG+ K+ K + + LY+
Sbjct: 1 VRAISGEKTKTGFAYADQISLLALEQSAQAARTIVRE-NGEGKV-KTLAAVAHQPLYTTL 58
Query: 385 DTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLV 444
D + S++ EK+ +L RV+K AR D RV +V A+L+G Y++IL+ DG + AD+RPLV
Sbjct: 59 DPLQSMSREEKLDILRRVDKAAREADKRVQEVNASLTGVYELILVAATDGTLAADVRPLV 118
Query: 445 QLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKCVSNSVNSALINLEAKPA 499
+L V++ VE++G+RE G SG GGR+ Y YF ++ + +V AL+NL A A
Sbjct: 119 RLSVSVQVEEDGKRERGASGGGGRFGYEYFLADLDGEVRADAWAKEAVRMALVNLSAVAA 178
Query: 500 PAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLA 559
PAG + VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS IG+++AS T+VD+GT+
Sbjct: 179 PAGTLPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQIGEQVASALCTVVDDGTMM 238
Query: 560 NRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRM 619
NRRGS+ IDDEG P Q LIENG+LKGYMQD +NARLM + TGN RRES+AH+P+PRM
Sbjct: 239 NRRGSVAIDDEGTPGQYNVLIENGVLKGYMQDKLNARLMGAAPTGNGRRESYAHLPMPRM 298
Query: 620 TNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVK 679
TNTYML G+ P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T PVK
Sbjct: 299 TNTYMLAGQSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTTPVK 358
Query: 680 GATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
GATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGGT
Sbjct: 359 GATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGGT 415
>gi|456352309|dbj|BAM86754.1| putative peptidase TldD [Agromonas oligotrophica S58]
Length = 474
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/470 (47%), Positives = 313/470 (66%), Gaps = 5/470 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LLE +LD + +G D + +F++++ E + G +K + +QG G+R
Sbjct: 8 LLERANLDRDAVRSEVGRGLAG-ADDGELFFEYSQTEALTFDNGRLKQATYDTSQGFGLR 66
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+ D + +S D+S L+ A + ++ +G ++ LY + +
Sbjct: 67 AVKDDAVGYAHSSDVSLPALMRAADAVSAVRGGYSGTFASAPPHTNVR---LYGDDNPLD 123
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
+ K+KLL ++ R KDPRV +V +L + V+ I R DG DIRPLV++ V
Sbjct: 124 APGFESKVKLLGEIDAYLRDKDPRVRQVTVSLGATWQVVEILRPDGESYRDIRPLVRVNV 183
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDM-ILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
+++ + R+E G+ G GGR Y F + + ++ AL+NL++ PAPAG M VV
Sbjct: 184 SVVAGQGDRQESGSKGYGGREAYARFIETKAWREAADGALREALVNLDSVPAPAGEMDVV 243
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LG GWPG++LHEA+GHGLEGDFNRK +SAF+ +GK +A+K +T+VD+GT+A+RRGS++I
Sbjct: 244 LGAGWPGVMLHEAVGHGLEGDFNRKKTSAFAGLLGKPVAAKGVTVVDDGTMASRRGSLSI 303
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PT T LIE+GIL GYMQD NARLMNM+ TGN RR+ +AH+P+PRMTNTYML G
Sbjct: 304 DDEGTPTSRTVLIEDGILVGYMQDRQNARLMNMAPTGNGRRQGYAHVPMPRMTNTYMLAG 363
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ P EII+SVKNG+YA NF GGQVDIT+GK+VF ++AY I+NGK+ PVKGA LIG+G
Sbjct: 364 ERDPAEIIASVKNGIYAVNFGGGQVDITSGKYVFQCTEAYKIENGKVGAPVKGAMLIGNG 423
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
P L ++SMIGND+ LD G+G CGK+GQ VPVGVGQPTL++D ITVGGT
Sbjct: 424 PTDLNRISMIGNDLSLDTGIGTCGKNGQGVPVGVGQPTLRMDRITVGGTG 473
>gi|365880115|ref|ZP_09419498.1| putative peptidase TldD [Bradyrhizobium sp. ORS 375]
gi|365291816|emb|CCD92029.1| putative peptidase TldD [Bradyrhizobium sp. ORS 375]
Length = 474
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/470 (47%), Positives = 313/470 (66%), Gaps = 5/470 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LLE +LD + + D + +F++++ E + G +K + +QG G+R
Sbjct: 8 LLERANLDRDAVRSEVARGLAG-ADDGELFFEYSQTEALTFDSGRLKQATYDTSQGFGLR 66
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+ D + +S D+S L+ A + ++ +G ++ LY+ + +
Sbjct: 67 AVKDDAVGYAHSSDVSLPALMRAADAVSAVRGGYSGTFASPPPHTNVR---LYADDNPLD 123
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
+ K+KLL ++ R KDPRV +V +L + V+ I R DG DIRPLV++ V
Sbjct: 124 APGFESKVKLLGEIDAYLRDKDPRVRQVTVSLGATWQVVEILRPDGESYRDIRPLVRVNV 183
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDM-ILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
+++ + R+E G+ G GGR Y F + + ++ AL+NLE+ PAPAG M VV
Sbjct: 184 SVVAGQGDRQESGSKGYGGREAYARFIETKAWREAADGALREALVNLESVPAPAGEMDVV 243
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LG GWPG++LHEA+GHGLEGDFNRK +SAF+ +GK +A+K +T+VD+GT+A+RRGS++I
Sbjct: 244 LGAGWPGVMLHEAVGHGLEGDFNRKKTSAFAGLMGKPVAAKGVTVVDDGTMASRRGSLSI 303
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PT T LIE+GIL GYMQD NARLMNM+ TGN RR+ +AH+P+PRMTNTYML G
Sbjct: 304 DDEGTPTSRTVLIEDGILVGYMQDRQNARLMNMAPTGNGRRQGYAHVPMPRMTNTYMLAG 363
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ P EII+SVKNG+YA NF GGQVDIT+GK+VF ++AY I+NGK+ PVKGA LIG+G
Sbjct: 364 ERDPAEIIASVKNGIYAVNFGGGQVDITSGKYVFQCTEAYKIENGKVGAPVKGAMLIGNG 423
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
P L ++SMIGND+ LD G+G CGK+GQ VPVGVGQPTL++D ITVGGT
Sbjct: 424 PTDLNRISMIGNDLALDTGIGTCGKNGQGVPVGVGQPTLRMDRITVGGTG 473
>gi|452963278|gb|EME68355.1| peptidase U62 modulator of DNA gyrase [Magnetospirillum sp. SO-1]
Length = 472
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 223/474 (47%), Positives = 322/474 (67%), Gaps = 5/474 (1%)
Query: 264 IARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQ 323
+A+ + LD L +I+ + D + + ++ ++E+ +L++G +K+ +F Q
Sbjct: 1 MAQDLFFTQTGLDADGLRRIVAEALEG-ADDGELFLEYRQSESLVLDDGQIKSASFDTTQ 59
Query: 324 GVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSF 383
G G+RA++G+ + + D+S+ + A + R++ + +G + +LY+
Sbjct: 60 GFGLRAVAGEAHGYAHGSDLSEAAIRRAAATVRAVRSGHSGSMAAPP---VAGARALYTE 116
Query: 384 TDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPL 443
+ ++ + +K++LLE ++ R +D RV +V A+L+G + + I R DG + ADIRP+
Sbjct: 117 VNPLAQVPFEDKVRLLEEIDSYTRSRDNRVRQVTASLAGSWQAVTILRADGTLAADIRPM 176
Query: 444 VQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-LEKCVSNSVNSALINLEAKPAPAG 502
V+L V +++ R E G G GGR Y + C ++ A +NL + PAPAG
Sbjct: 177 VRLGVNVVLGDGKRMETGGHGMGGRIGYGGVMGLADWRHCADEALRQASVNLGSVPAPAG 236
Query: 503 IMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR 562
M VVLG GWPG++LHEA+GHGLEGDFNRK +SAF+ G R+AS +T+VD+GT+ +RR
Sbjct: 237 EMPVVLGNGWPGVMLHEAVGHGLEGDFNRKATSAFTGKTGARVASPGVTVVDDGTIPDRR 296
Query: 563 GSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNT 622
GS++IDDEG PT T LIE+GIL GY+QD MNARLM ++ TGN RR+S+AH PIPRMTNT
Sbjct: 297 GSLSIDDEGTPTSRTVLIEDGILVGYLQDRMNARLMGVAATGNGRRQSYAHAPIPRMTNT 356
Query: 623 YMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGAT 682
+M+ G P EII+SV G+YA NF GGQVDITNGKFVFSAS+AY+I+NGK+ VKGAT
Sbjct: 357 FMMAGSLDPAEIIASVPRGIYAVNFGGGQVDITNGKFVFSASEAYLIENGKVGAAVKGAT 416
Query: 683 LIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
LIG+GP+ L +++MIGND+ LDPG+G CGKDGQ VPVGVGQPTL++D +TVGGT
Sbjct: 417 LIGNGPDALTRITMIGNDLALDPGIGTCGKDGQGVPVGVGQPTLRMDGLTVGGT 470
>gi|94496012|ref|ZP_01302591.1| peptidase U62, modulator of DNA gyrase [Sphingomonas sp. SKA58]
gi|94424704|gb|EAT09726.1| peptidase U62, modulator of DNA gyrase [Sphingomonas sp. SKA58]
Length = 490
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 220/473 (46%), Positives = 321/473 (67%), Gaps = 6/473 (1%)
Query: 265 ARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQG 324
AR +L P LD ++ + D + Y Q+ +E++ ++G +KT ++S + G
Sbjct: 21 ARGLLYRPGLLDPDGARRLTAQAL-GRCDDGELYLQYRASESFGFDDGRLKTADYSTDAG 79
Query: 325 VGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFT 384
G+R +SG+ T F +++D+S+ + A ++ + + + + LY+
Sbjct: 80 FGLRGVSGEMTGFAHANDLSEAAIAKAAQTLTLLDPAKDQPAPPPQRTNR----HLYTDA 135
Query: 385 DTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLV 444
+ + + EK+ L ++ AR +DPRV +V +L+G + V+ I R DG DIRPLV
Sbjct: 136 NPLEIVPFAEKVSLCAEIDAAARARDPRVAQVSVSLAGSWSVVEIVRADGFTATDIRPLV 195
Query: 445 QLFVTIIVEKNGRREIGNSGCGGRYNYNYFTD-MILEKCVSNSVNSALINLEAKPAPAGI 503
+L V+II+E++GRRE G G GGRY Y+ D + + + ++ A +N+ + APAG
Sbjct: 196 RLNVSIILEEDGRRETGVFGIGGRYLYDQVMDKAVWNRAIDEALAQARVNMRSVAAPAGE 255
Query: 504 MKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRG 563
M V+LGPGWPG+L+HEAIGHGLEGDFNRKG+SAFS IG+R+A+ +T+VD+G++ +RRG
Sbjct: 256 MTVLLGPGWPGVLVHEAIGHGLEGDFNRKGTSAFSGRIGQRVAAPGVTVVDDGSIMDRRG 315
Query: 564 SINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTY 623
S++IDDEG PTQ LIE+G+L+GYMQD +NARLM ++ TGN RRES+AH P+PRMTNT+
Sbjct: 316 SLSIDDEGTPTQENILIEDGVLRGYMQDRLNARLMGVAPTGNGRRESYAHAPMPRMTNTF 375
Query: 624 MLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATL 683
+ G+ PEE++S +KNG++A +F GGQVDI +GKFVFS ++AY ++NGK+ P+KGATL
Sbjct: 376 IKGGQDDPEELLSRMKNGIFAKSFGGGQVDIVSGKFVFSCTEAYKVENGKLGDPIKGATL 435
Query: 684 IGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
IG GP L KV IGND LD G+G+CGK GQ VP GVGQPTL ++ +TVGGT
Sbjct: 436 IGDGPTALTKVIGIGNDWALDEGIGMCGKGGQSVPAGVGQPTLLMEGLTVGGT 488
>gi|367475792|ref|ZP_09475229.1| putative peptidase TldD [Bradyrhizobium sp. ORS 285]
gi|365271910|emb|CCD87697.1| putative peptidase TldD [Bradyrhizobium sp. ORS 285]
Length = 474
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/470 (47%), Positives = 312/470 (66%), Gaps = 5/470 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LLE +LD + + D + +F++++ E + G +K + +QG G+R
Sbjct: 8 LLERANLDRDAVRSEVARGLAG-ADDGELFFEYSQTEALTFDNGRLKQATYDTSQGFGLR 66
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+ D + +S D+S L+ A + ++ +G ++ LY + +
Sbjct: 67 AVKDDAVGYAHSSDVSLPALMRAADAVSAVRGGYSGTFASAPPHTNVR---LYGDDNPLD 123
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
+ K+KLL ++ R KDPRV +V +L + V+ I R DG DIRPLV++ V
Sbjct: 124 APGFESKVKLLGEIDAYLRDKDPRVRQVTVSLGATWQVVEILRPDGESYRDIRPLVRVNV 183
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDM-ILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
+++ + R+E G+ G GGR Y F + + ++ AL+NLE+ PAPAG M VV
Sbjct: 184 SVVAGQGDRQESGSKGYGGREAYARFIETKAWREAADGALREALVNLESVPAPAGEMDVV 243
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LG GWPG++LHEA+GHGLEGDFNRK +SAF+ +GK +A+K +T+VD+GT+A+RRGS++I
Sbjct: 244 LGAGWPGVMLHEAVGHGLEGDFNRKKTSAFAGLMGKPVAAKGVTVVDDGTMASRRGSLSI 303
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PT T LIE+GIL GYMQD NARLMNM+ TGN RR+ +AH+P+PRMTNTYML G
Sbjct: 304 DDEGTPTSRTVLIEDGILVGYMQDRQNARLMNMAPTGNGRRQGYAHVPMPRMTNTYMLAG 363
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ P EII+SVKNG+YA NF GGQVDIT+GK+VF ++AY I+NGK+ PVKGA LIG+G
Sbjct: 364 ERDPAEIIASVKNGIYAVNFGGGQVDITSGKYVFQCTEAYKIENGKVGAPVKGAMLIGNG 423
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
P L ++SMIGND+ LD G+G CGK+GQ VPVGVGQPTL++D ITVGGT
Sbjct: 424 PTDLNRISMIGNDLSLDTGIGTCGKNGQGVPVGVGQPTLRMDRITVGGTG 473
>gi|46201917|ref|ZP_00208301.1| COG0312: Predicted Zn-dependent proteases and their inactivated
homologs [Magnetospirillum magnetotacticum MS-1]
Length = 477
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 224/476 (47%), Positives = 323/476 (67%), Gaps = 5/476 (1%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
L +A+ + LD L +++ D + + ++ ++E+ +L++G +K+ +F
Sbjct: 4 LAVAQDLFFTQTGLDADGLRRVVAEALMG-ADDGELFLEYRQSESLVLDDGQIKSASFDT 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLY 381
QG G+RA++G+ + + D+S + + A ++ R++ +G + +LY
Sbjct: 63 TQGFGLRAVAGEAHGYAHGSDLSLDAVRRAAQTVRAV---RSGHAGTMAQAPVGGAKALY 119
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + ++ + +K++LLE ++ R KD RV +V A+L+G + + I R DG + ADIR
Sbjct: 120 TEVNPLAQVPFEDKVRLLEEIDSYTRSKDNRVRQVTASLAGSWQAVAILRADGTLAADIR 179
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMI-LEKCVSNSVNSALINLEAKPAP 500
P+V+L V +++ + R E G G GGR Y + C ++ A +NL + PAP
Sbjct: 180 PMVRLGVNVVLAEGDRMETGGHGMGGRIGYGGVMGLADWHHCADEALRQASVNLGSIPAP 239
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
AG M VVLGPGWPG++LHEA+GHGLEGDFNRK +SAF+ IG R+AS +T+VD+GT+ +
Sbjct: 240 AGEMPVVLGPGWPGVMLHEAVGHGLEGDFNRKSTSAFTGKIGTRVASPGVTVVDDGTIPD 299
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
RRGS++IDDEG + T LIE+GIL GY+QD MNARLM + TGN RR+S+AH PIPRMT
Sbjct: 300 RRGSLSIDDEGTASSRTVLIEDGILVGYLQDRMNARLMGVPATGNGRRQSYAHAPIPRMT 359
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKG 680
NT+ML G P EII+SV G+YA NF GGQVDITNGKFVFSAS+AY+I+NGK+ VKG
Sbjct: 360 NTFMLGGDKDPAEIIASVPRGIYAVNFGGGQVDITNGKFVFSASEAYLIENGKVGPAVKG 419
Query: 681 ATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
ATLIG+GP+ + +V++IGND+ LDPG+G CGKDGQ VPVGVGQPTL++D +TVGGT
Sbjct: 420 ATLIGNGPDAMTRVTLIGNDLALDPGIGTCGKDGQGVPVGVGQPTLRMDGLTVGGT 475
>gi|295687724|ref|YP_003591417.1| peptidase U62 [Caulobacter segnis ATCC 21756]
gi|295429627|gb|ADG08799.1| peptidase U62 modulator of DNA gyrase [Caulobacter segnis ATCC
21756]
Length = 478
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 229/477 (48%), Positives = 331/477 (69%), Gaps = 5/477 (1%)
Query: 261 PLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFS 320
P A LL+ +D + ++LG D + + + +++E+++ ++G +K+ ++
Sbjct: 4 PFPAASLSLLDAAGVDPERARQVLGEALAG-ADDGELFLERSESESFVFDDGRLKSASYD 62
Query: 321 INQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSL 380
+G G+R ++G+ + ++ +IS+ + A S S+A + G + + L
Sbjct: 63 SGEGFGLRVVAGETAGYAHAAEISEAAIRRAADSA-SLAKR--GHAGVAAEGPRATNEKL 119
Query: 381 YSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADI 440
Y + + S + +K+ LL+ ++ AR +DPRV++++A+++GE V+ I R DG ++ D+
Sbjct: 120 YGEDNPVDSPDFSDKVALLQEIDAFARARDPRVVQIMASMAGERRVVEILRADGRLIRDV 179
Query: 441 RPLVQLFVTIIVEKNGRREIGNSGCGGRYNYN-YFTDMILEKCVSNSVNSALINLEAKPA 499
RPLV++ V + VEK+GRRE G+SG GGR + + + ++ V S+ AL+NL+A
Sbjct: 180 RPLVRVNVQVTVEKDGRRETGSSGAGGRAGFAAWISPDKWQEQVEESLRRALVNLDAVAC 239
Query: 500 PAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLA 559
PAG M VVLGPGW G+LLHEA+GHGLEGDFNRKG SAFS IG+R+A+ +T+ D+G++A
Sbjct: 240 PAGEMDVVLGPGWNGVLLHEAVGHGLEGDFNRKGISAFSGRIGERVAAPGVTVFDDGSIA 299
Query: 560 NRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRM 619
RRGS+ +DDEG PT+ T LIE+GIL GYM D M+ARLM M TGN RR+S+AH+P+PRM
Sbjct: 300 GRRGSLTVDDEGTPTERTILIEDGILVGYMHDRMSARLMGMKATGNGRRQSYAHMPMPRM 359
Query: 620 TNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVK 679
TNT ML GK P+E+I+S+K GLY NF GGQVDITNGKFVF ++AY++++GKIT PVK
Sbjct: 360 TNTGMLAGKDDPQEMIASMKRGLYCANFGGGQVDITNGKFVFQCTEAYLVEDGKITAPVK 419
Query: 680 GATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
GATLIG GP+ L KV+MIGND DPG+GVCGK GQ VPVGVGQP+LKI +TVGGT
Sbjct: 420 GATLIGDGPSALTKVTMIGNDFDFDPGIGVCGKSGQGVPVGVGQPSLKITGLTVGGT 476
>gi|337270064|ref|YP_004614119.1| peptidase U62 modulator of DNA gyrase [Mesorhizobium opportunistum
WSM2075]
gi|336030374|gb|AEH90025.1| peptidase U62 modulator of DNA gyrase [Mesorhizobium opportunistum
WSM2075]
Length = 470
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 219/470 (46%), Positives = 322/470 (68%), Gaps = 7/470 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
L+ FD+ + + +I+ N D + + +++++E + + G +KT NF+ +QG G+R
Sbjct: 4 LIGQFDISDDRIKQIVAETI-NGADDGELFLEYSESEALMFDNGRLKTANFNTDQGFGLR 62
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKIN-SLYSFTDTI 387
A++G+ + + +S D+S+ +L+ A + ++ +G + + N LY + I
Sbjct: 63 AVAGEASGYAHSSDLSEASLLRAADAVSTVKGGYSGTLAA----APARTNRHLYGEENPI 118
Query: 388 SSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLF 447
S + K KLL+ ++ R +DPRV +V A+L+ + + I R DG +V DIRPLV++
Sbjct: 119 PSPSFEAKAKLLQEIDAWLRAEDPRVRQVTASLAASWQHVEIVRADGQMVRDIRPLVRIN 178
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKV 506
V+++V R+E G+ G GGR + F + + ++ AL+NLEA PAPAG +
Sbjct: 179 VSVVVGDGDRQESGSYGMGGRKAFGEFLIEDSWKHAAKEALRQALVNLEAIPAPAGTFDI 238
Query: 507 VLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSIN 566
VL GWPG++LHEA+GHGLEGDFNRK +SAF+ +G+++A+K +T+VD+GT+ RRGS+
Sbjct: 239 VLSSGWPGVMLHEAVGHGLEGDFNRKKTSAFAGLMGQQVAAKGVTVVDDGTIPERRGSLT 298
Query: 567 IDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLN 626
+DDEG P+ LIE+G L GYMQD NARLM M TGN RRE +AH P+PRMTNTYM
Sbjct: 299 VDDEGTPSARNVLIEDGRLVGYMQDRQNARLMGMKATGNGRREGYAHQPMPRMTNTYMTA 358
Query: 627 GKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGH 686
G P+EII+SVKNG+YA +F GGQVDIT+GKFVF ++AY+I+NGK+T P+KGA LIG+
Sbjct: 359 GDMEPDEIIASVKNGIYAVSFGGGQVDITSGKFVFGCTEAYLIENGKVTQPIKGAMLIGN 418
Query: 687 GPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
GP+ + +VSM+GNDMKLD G+G+CGK GQ VPVGVGQP L+++ +TVGGT
Sbjct: 419 GPDAMHRVSMVGNDMKLDNGIGMCGKAGQGVPVGVGQPHLRMNQMTVGGT 468
>gi|146343480|ref|YP_001208528.1| protease TldD [Bradyrhizobium sp. ORS 278]
gi|146196286|emb|CAL80313.1| putative peptidase TldD [Bradyrhizobium sp. ORS 278]
Length = 474
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 224/470 (47%), Positives = 313/470 (66%), Gaps = 5/470 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LLE +LD + + D + +F++++ E + G +K + +QG G+R
Sbjct: 8 LLERANLDRDAVRSEVARGLAG-ADDGELFFEYSQTEALTFDNGRLKQATYDTSQGFGLR 66
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+ D + +S D+S L+ A + ++ +G ++ LY+ + +
Sbjct: 67 AVKDDAVGYAHSSDVSLPALMRAADAVSAVRGGYSGTFASAPPHTNVR---LYADDNPLD 123
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
+ K+KLL ++ R KDPRV +V +L + V+ I R DG DIRPLV++ V
Sbjct: 124 APGFESKVKLLGEIDAYLRDKDPRVRQVTVSLGATWQVVEILRPDGESYRDIRPLVRVNV 183
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDM-ILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
+++ + R+E G+ G GGR Y F + + ++ AL+NLE+ PAPAG M VV
Sbjct: 184 SVVAGQGDRQESGSKGYGGREAYARFIETKAWREAADGALREALVNLESVPAPAGEMDVV 243
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LG GWPG++LHEA+GHGLEGDFNRK +SAF+ +G+ +A+K +T+VD+GT+A+RRGS++I
Sbjct: 244 LGAGWPGVMLHEAVGHGLEGDFNRKKTSAFAGLMGQPVAAKGVTVVDDGTMASRRGSLSI 303
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PT T LIE+GIL GYMQD NARLMNM+ TGN RR+ +AH+P+PRMTNTYML G
Sbjct: 304 DDEGTPTSRTVLIEDGILVGYMQDRQNARLMNMAPTGNGRRQGYAHVPMPRMTNTYMLAG 363
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ P EII+SVKNG+YA NF GGQVDIT+GK+VF ++AY I+NGK+ PVKGA LIG+G
Sbjct: 364 ERDPAEIIASVKNGIYAVNFGGGQVDITSGKYVFQCTEAYKIENGKVGAPVKGAMLIGNG 423
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
P L ++SMIGND+ LD G+G CGK+GQ VPVGVGQPTL++D ITVGGT
Sbjct: 424 PTDLNRISMIGNDLALDTGIGTCGKNGQGVPVGVGQPTLRMDRITVGGTG 473
>gi|390451242|ref|ZP_10236820.1| microcin-processing peptidase 2 [Nitratireductor aquibiodomus RA22]
gi|389661264|gb|EIM72887.1| microcin-processing peptidase 2 [Nitratireductor aquibiodomus RA22]
Length = 472
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 220/470 (46%), Positives = 320/470 (68%), Gaps = 5/470 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL+ FD L ++ + D + + ++ + E + ++G +KT +F+ +QG G+R
Sbjct: 6 LLDAFDCSPDRLKSLVADTISG-ADDGELFLEYREGEALVFDDGRLKTASFNTDQGFGLR 64
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A++G+ + + +S ++S+ +L A + ++ + +GK+ + LY + I+
Sbjct: 65 AVAGEASGYAHSSELSEASLRRAADAVSTVKDGYSGKLATAPAGTNQR---LYGDENPIT 121
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
S E KLL+ ++ R KDPRV +V A+L+ + + I R DG I DIRPLV++ V
Sbjct: 122 SPGFEENAKLLQEIDGWLRAKDPRVRQVTASLAASWQHVEIVRADGQIARDIRPLVRVNV 181
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
+++V R+E G+ G GGR ++ F + + S ++ AL+NLEA PAPAG +V
Sbjct: 182 SVMVGDGDRQETGSYGMGGRKSFGEFLAEDSWQFAASEALRQALVNLEAVPAPAGTFDIV 241
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
L GWPG++LHEA+GHGLEGDFNRK +SAF+ +G+++A+K +T+VD+GT++ RRGS+ I
Sbjct: 242 LANGWPGVMLHEAVGHGLEGDFNRKKTSAFAGLMGEQVAAKGVTVVDDGTISERRGSLTI 301
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG P+ LIE+G L GYMQD NARLM M+ TGN RRES+AH P+PRMT TYM G
Sbjct: 302 DDEGTPSGRNVLIEDGKLVGYMQDRQNARLMGMAPTGNGRRESYAHEPMPRMTTTYMTGG 361
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
PEEII+SVK G+YA +F GGQVDIT+GKFVF ++AY+I++GK+T PVKGA LIG+G
Sbjct: 362 DRTPEEIIASVKKGIYAVSFGGGQVDITSGKFVFGCTEAYMIEDGKVTQPVKGAMLIGNG 421
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
P+ + +VSM+GNDM LD G+G+CGK GQ VPVGVGQP L++D +TVGGT
Sbjct: 422 PDAMHRVSMVGNDMTLDNGIGMCGKAGQGVPVGVGQPHLRMDQMTVGGTQ 471
>gi|365891822|ref|ZP_09430196.1| putative peptidase TldD [Bradyrhizobium sp. STM 3809]
gi|365332193|emb|CCE02727.1| putative peptidase TldD [Bradyrhizobium sp. STM 3809]
Length = 474
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/470 (47%), Positives = 312/470 (66%), Gaps = 5/470 (1%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LLE +LD + + D + +F++++ E + G +K + +QG G+R
Sbjct: 8 LLERANLDRDAVRSEVARGLSG-ADDGELFFEYSQTEALTFDNGRLKQATYDTSQGFGLR 66
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYSFTDTIS 388
A+ D + +S D+S L+ A + ++ +G ++ LY + +
Sbjct: 67 AVKDDAVGYAHSSDVSLPALMRAADAVSAVRGGYSGTFASAPPHTNVR---LYGDDNPLD 123
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
+ K+KLL ++ R KDPRV +V +L + V+ I R DG DIRPLV++ V
Sbjct: 124 APGFESKVKLLGEIDAYLRDKDPRVRQVTVSLGATWQVVEILRPDGESYRDIRPLVRVNV 183
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYFTDM-ILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
+++ + R+E G+ G GGR Y F + + ++ AL+NL++ PAPAG M VV
Sbjct: 184 SVVAGQGDRQESGSKGYGGREAYARFIETKAWREAADGALREALVNLDSVPAPAGEMDVV 243
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LG GWPG++LHEA+GHGLEGDFNRK +SAF+ +GK +A+K +T+VD+GT+A+RRGS++I
Sbjct: 244 LGAGWPGVMLHEAVGHGLEGDFNRKKTSAFAGLMGKPVAAKGVTVVDDGTMASRRGSLSI 303
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PT T LIE+GIL GYMQD NARLMNM+ TGN RR+ +AH+P+PRMTNTYML G
Sbjct: 304 DDEGTPTSRTVLIEDGILVGYMQDRQNARLMNMAPTGNGRRQGYAHVPMPRMTNTYMLAG 363
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ P EII+SVKNG+YA NF GGQVDIT+GK+VF ++AY I+NGK+ PVKGA LIG+G
Sbjct: 364 ERDPAEIIASVKNGIYAVNFGGGQVDITSGKYVFQCTEAYKIENGKVGAPVKGAMLIGNG 423
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
P L ++SMIGND+ LD G+G CGK+GQ VPVGVGQPTL++D ITVGGT
Sbjct: 424 PTDLNRISMIGNDLALDTGIGTCGKNGQGVPVGVGQPTLRMDRITVGGTG 473
>gi|399066908|ref|ZP_10748619.1| putative Zn-dependent protease-like protein [Novosphingobium sp.
AP12]
gi|398027612|gb|EJL21158.1| putative Zn-dependent protease-like protein [Novosphingobium sp.
AP12]
Length = 472
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 230/473 (48%), Positives = 319/473 (67%), Gaps = 10/473 (2%)
Query: 266 RSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGV 325
RS+L +E ++L D + + QF +E + ++G +KT ++S + G
Sbjct: 7 RSLLYAQLSPEEA---QVLAAETLKSCDDGELFMQFAASEAFGFDDGRLKTADYSRDAGF 63
Query: 326 GVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINS-LYSFT 384
G+R +SG+ T F ++++IS I T + + + GK ++ K N+ LY+
Sbjct: 64 GLRGVSGEMTGFAHANEISA-AAIRRAGETLQLLDPATGK----RSAPPAKTNARLYTDA 118
Query: 385 DTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLV 444
+ + EK++LLE ++ AR +DPRV +V A+LSG + V+ I R DG I D+RPLV
Sbjct: 119 SPLDLVGFAEKVRLLETIDAAARARDPRVSQVSASLSGSWSVVEIVRPDGYIGTDVRPLV 178
Query: 445 QLFVTIIVEKNGRREIGNSGCGGRYNYN-YFTDMILEKCVSNSVNSALINLEAKPAPAGI 503
+L V+I+ E NGRRE G+ G GGR+ Y+ F + + ++ ALINLE+ APAG
Sbjct: 179 RLNVSIVAESNGRRETGSFGMGGRFLYDDLFKPENWNEAIDTALAQALINLESVDAPAGE 238
Query: 504 MKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRG 563
+V+ G GWPG+LLHEAIGHGLEGDFNRKG+SAFS IG+R+A+ +TIVD+G + RRG
Sbjct: 239 FQVLCGAGWPGVLLHEAIGHGLEGDFNRKGTSAFSGRIGERVAAPGVTIVDDGAIPGRRG 298
Query: 564 SINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTY 623
S+ IDDEG PT+ T LIE+GILKGYMQD +NARLM + TGN RRE++AH P RMTNT+
Sbjct: 299 SLTIDDEGTPTRETVLIEDGILKGYMQDRLNARLMGVEPTGNGRRENYAHAPQVRMTNTF 358
Query: 624 MLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATL 683
M G P E+++ +K G++A NF GGQVDI +GKFVFS ++AY+++NGK+ P+KGATL
Sbjct: 359 MKGGNDDPAEMLAGMKKGIFAKNFGGGQVDIVSGKFVFSCTEAYMVENGKLGAPIKGATL 418
Query: 684 IGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
IG GP++L +V IGND LD GVG+CGK GQ VP GVGQP+L ID +TVGGT
Sbjct: 419 IGDGPSVLTRVKAIGNDFALDRGVGMCGKGGQSVPAGVGQPSLLIDGLTVGGT 471
>gi|393774618|ref|ZP_10362979.1| TldD protein [Novosphingobium sp. Rr 2-17]
gi|392719951|gb|EIZ77455.1| TldD protein [Novosphingobium sp. Rr 2-17]
Length = 472
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 219/443 (49%), Positives = 312/443 (70%), Gaps = 5/443 (1%)
Query: 295 ADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKS 354
+ + QF +E++ ++G +KT ++S + G G+R ++G+ T F ++++IS + A ++
Sbjct: 33 GELFLQFVASESFSFDDGRLKTADYSRDSGFGLRGVTGEMTGFAHANEISPAAIRRAGET 92
Query: 355 TRSIANQSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVI 414
+ + + + + LY+ + + EK++LLE ++ AR +DPRV
Sbjct: 93 LKLLDPATGTRPAPPPRSNR----HLYTDASPLDLLGFAEKVRLLETIDAAARARDPRVA 148
Query: 415 KVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYN-Y 473
+V A+LS + V+ I R DG + D+RPLV+L V+I+ E NGRRE G+ G GGRY Y+
Sbjct: 149 QVSASLSASWTVVEIVRPDGFVATDVRPLVRLNVSIVAESNGRRETGSFGMGGRYLYDDL 208
Query: 474 FTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKG 533
F + + ++++ AL+NLE+ APAG + V+L PGWPG+LLHEAIGHGLEGDFNRKG
Sbjct: 209 FKPENWNRAIDSALSQALVNLESIDAPAGELAVLLAPGWPGVLLHEAIGHGLEGDFNRKG 268
Query: 534 SSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIM 593
+SAFS IG+R+A+ +TIVD+G + RRGS++IDDEG PTQ T LIE+GILKGYMQD +
Sbjct: 269 TSAFSGRIGERVAAPGVTIVDDGAIDARRGSLSIDDEGTPTQETVLIEDGILKGYMQDRL 328
Query: 594 NARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVD 653
NARLM + TGN RRES+AH P RMTNT+M G P E+++ +K G++A NF GGQVD
Sbjct: 329 NARLMGVEPTGNGRRESYAHAPQVRMTNTFMKAGNDDPAELLAGMKKGIFAKNFGGGQVD 388
Query: 654 ITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKD 713
I +GKFVFS ++AY+++NGK+ P+KGATL+G GP++L +V IGND++LD GVGVCGK
Sbjct: 389 IVSGKFVFSCTEAYLVENGKLGAPIKGATLVGDGPSVLTRVRGIGNDLELDLGVGVCGKG 448
Query: 714 GQMVPVGVGQPTLKIDSITVGGT 736
GQ VP GVGQPTL I+ +TVGGT
Sbjct: 449 GQSVPAGVGQPTLLIEGLTVGGT 471
>gi|262164134|ref|ZP_06031873.1| TldD protein probably a protease [Vibrio mimicus VM223]
gi|262027662|gb|EEY46328.1| TldD protein probably a protease [Vibrio mimicus VM223]
Length = 433
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 238/435 (54%), Positives = 315/435 (72%), Gaps = 7/435 (1%)
Query: 308 ILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIK 367
+LE+ I+K G+F+I+ GVGVRA+SG+KT F YSD I L + + R IA Q G+
Sbjct: 1 MLEDSIIKDGSFNIDCGVGVRAVSGEKTGFAYSDQIQLEGLKQSAIAARGIAQQ--GQNL 58
Query: 368 IIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVI 427
++ K+ + Y + + S ++K +LL++++ R K+P + +V +LSG ++ I
Sbjct: 59 TVQAFKRAQHPQFYGANNPLESWEKQQKTELLKQLDAYIRTKEPLITEVSVSLSGVHEQI 118
Query: 428 LITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-----TDMILEKC 482
L+ DG DIRPLV+L ++++ +K RRE G++G GGR+ Y+YF I
Sbjct: 119 LVAATDGTYAGDIRPLVRLSISVLAQKGDRRERGSAGGGGRFGYDYFLQEEAGQKIAFSF 178
Query: 483 VSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIG 542
++ AL+NLEA APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS F+ +G
Sbjct: 179 ADEAIRQALVNLEAVAAPAGTMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSVFAGKVG 238
Query: 543 KRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSI 602
K++ S TIVD+GTL + RGS+N+DDEG Q LIE GILKGY+QD +NARLM ++
Sbjct: 239 KKVTSDLCTIVDDGTLKDLRGSLNVDDEGVSGQYNVLIEKGILKGYIQDKLNARLMGVAP 298
Query: 603 TGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFS 662
TGN RRES+AH+P+PRMTNTYML G+ PEEII+SVK G+YA NF GGQVDIT+GKFVFS
Sbjct: 299 TGNGRRESYAHLPMPRMTNTYMLPGEHTPEEIIASVKKGIYAPNFGGGQVDITSGKFVFS 358
Query: 663 ASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVG 722
AS+AY+I+NGKIT P+KGATLIG G +++VSM+GND+ LD GVGVCGK GQ VPVGVG
Sbjct: 359 ASEAYLIENGKITRPIKGATLIGSGIEAMQQVSMVGNDLALDRGVGVCGKAGQSVPVGVG 418
Query: 723 QPTLKIDSITVGGTN 737
QPTLK+D++TVGGT
Sbjct: 419 QPTLKLDALTVGGTE 433
>gi|91975292|ref|YP_567951.1| peptidase U62, modulator of DNA gyrase [Rhodopseudomonas palustris
BisB5]
gi|91681748|gb|ABE38050.1| microcin-processing peptidase 2. Unknown type peptidase. MEROPS
family U62 [Rhodopseudomonas palustris BisB5]
Length = 475
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/476 (46%), Positives = 317/476 (66%), Gaps = 5/476 (1%)
Query: 263 NIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSIN 322
++A++ LL+ +LD + + + D + Y ++++ E + G +K +
Sbjct: 3 SLAQTSLLDRANLDRDDVRREIARGLTG-ADDGELYLEYSQTEALAFDNGRLKQATYDTA 61
Query: 323 QGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGKIKIIKNIKKIKINSLYS 382
QG G+RA+ D + +S D+S LI A + ++ +G ++ LY
Sbjct: 62 QGFGLRAVKDDAVGYAHSSDVSLPALIRAADAVAAVRGDYSGSFAAAPAHTNVR---LYG 118
Query: 383 FTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRP 442
+ + + K+KLL ++ R KDPRV +V ++ + V+ I R DG D+RP
Sbjct: 119 DGNPLDAPGFEAKVKLLAEIDAYIRDKDPRVRQVSVSVGATWQVVEIHRPDGESYRDVRP 178
Query: 443 LVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDM-ILEKCVSNSVNSALINLEAKPAPA 501
LV++ V+++ + R+E GN G GGR Y F + + ++ AL+NLE+ PAPA
Sbjct: 179 LVRVNVSVVAGQGDRQESGNKGYGGREPYARFIETKAWREAADGALREALVNLESVPAPA 238
Query: 502 GIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANR 561
G M VVLGPGWPG++LHEA+GHGLEGDFNRK +SAF+ +G+++A+K +T+VD+GT++ R
Sbjct: 239 GEMDVVLGPGWPGVMLHEAVGHGLEGDFNRKQTSAFAGLLGQQVAAKGVTVVDDGTISAR 298
Query: 562 RGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTN 621
RGS++IDDEG PT T LIE+G+L GYMQD NARLM M TGN RR+S+AH+P+PRMTN
Sbjct: 299 RGSLSIDDEGTPTSRTVLIEDGVLTGYMQDRQNARLMKMQPTGNGRRQSYAHVPMPRMTN 358
Query: 622 TYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGA 681
TYML G+ P EII+SVKNG+YA NF GGQVDIT+GK+VF ++AY I+NGKI P+KGA
Sbjct: 359 TYMLAGQRDPAEIIASVKNGIYAANFGGGQVDITSGKYVFQCTEAYKIENGKIGAPLKGA 418
Query: 682 TLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
LIG+GP L ++SMIGND++LD G+G CGK+GQ VPVGVGQPTL++D ITVGGT
Sbjct: 419 MLIGNGPTDLHRISMIGNDLQLDSGIGTCGKNGQGVPVGVGQPTLRMDRITVGGTG 474
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.139 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,556,582,568
Number of Sequences: 23463169
Number of extensions: 515335391
Number of successful extensions: 1374320
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3818
Number of HSP's successfully gapped in prelim test: 2335
Number of HSP's that attempted gapping in prelim test: 1360203
Number of HSP's gapped (non-prelim): 6928
length of query: 737
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 587
effective length of database: 8,839,720,017
effective search space: 5188915649979
effective search space used: 5188915649979
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 81 (35.8 bits)