Your job contains 1 sequence.
>psy9403
MRIKGESVEEISGFLNAINSLFIPLEIPISKYAPIIIPSYNGSRRFMNVIPLLALLLSKK
GIPVFIHGIKKNFGRITTYEILKKLGYFAVSSKKKAIKYLKLKRLVFMDISILIPELSKL
LEIYYMLGIRNSSHLLVKIIQPLSIPALRLVSYTHPEYLKILSDYFYNEKSLGDIFLMQG
TEGEVIPNICNSKQIIHWFHDNKYTKLTKEQNKEISFPKNSNINDNVLWIQSVLDNKLPI
PSTIINQVKNCILISQKNIHPLNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQ
FTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIAN
QSNGKIKIIKNIKKIKINSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANL
SGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILE
KCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNC
IGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNM
SITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFV
FSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVG
VGQPTLKIDSITVGGTN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy9403
(737 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TIGR_CMR|CPS_4553 - symbol:CPS_4553 "tldD protein" specie... 1382 2.6e-141 1
UNIPROTKB|P0AGG8 - symbol:tldD "protease involved in Micr... 1359 7.2e-139 1
TIGR_CMR|SO_4091 - symbol:SO_4091 "tldD protein" species:... 1348 1.1e-137 1
TIGR_CMR|CBU_1467 - symbol:CBU_1467 "TldD protein" specie... 1347 1.3e-137 1
UNIPROTKB|Q48EA2 - symbol:tldD "TldD protein" species:264... 1346 1.7e-137 1
UNIPROTKB|Q9KUU3 - symbol:VC_0422 "TldD protein" species:... 1279 2.2e-130 1
TIGR_CMR|VC_0422 - symbol:VC_0422 "tldD protein" species:... 1279 2.2e-130 1
TIGR_CMR|ECH_0152 - symbol:ECH_0152 "tldD protein" specie... 1161 6.9e-118 1
TIGR_CMR|APH_1310 - symbol:APH_1310 "TldD protein" specie... 1109 2.2e-112 1
UNIPROTKB|Q5LNX6 - symbol:SPO3077 "TldD/PmbA family prote... 1105 5.9e-112 1
TIGR_CMR|SPO_3077 - symbol:SPO_3077 "TldD protein" specie... 1105 5.9e-112 1
UNIPROTKB|Q0C3D7 - symbol:tldD "TldD protein" species:228... 1104 7.6e-112 1
TIGR_CMR|NSE_0224 - symbol:NSE_0224 "TldD protein" specie... 1007 1.4e-101 1
TIGR_CMR|CHY_0642 - symbol:CHY_0642 "tldD protein" specie... 733 1.6e-72 1
UNIPROTKB|Q3Z928 - symbol:DET0527 "TldD/PmbA family prote... 422 5.8e-39 1
TIGR_CMR|DET_0527 - symbol:DET_0527 "TldD/PmbA family pro... 422 5.8e-39 1
UNIPROTKB|P30177 - symbol:ybiB "predicted transferase/pho... 347 9.0e-31 1
UNIPROTKB|Q74BI1 - symbol:GSU2060 "Zinc protease PmbA, pu... 302 2.4e-24 1
TIGR_CMR|GSU_2060 - symbol:GSU_2060 "pmbA protein, putati... 302 2.4e-24 1
TIGR_CMR|CHY_0656 - symbol:CHY_0656 "putative pmbA protei... 290 7.7e-23 1
UNIPROTKB|Q2GGH4 - symbol:pmbA "PmbA protein" species:205... 280 1.1e-21 1
TIGR_CMR|ECH_0650 - symbol:ECH_0650 "pmbA protein" specie... 280 1.1e-21 1
UNIPROTKB|Q2GK15 - symbol:pmbA "PmbA protein" species:212... 242 2.2e-17 1
TIGR_CMR|APH_0705 - symbol:APH_0705 "pmbA protein" specie... 242 2.2e-17 1
UNIPROTKB|Q2GDL4 - symbol:pmbA "PmbA protein" species:222... 229 7.0e-16 1
TIGR_CMR|NSE_0549 - symbol:NSE_0549 "pmbA protein" specie... 229 7.0e-16 1
UNIPROTKB|Q3Z929 - symbol:DET0526 "PmbA/tldD family prote... 227 9.8e-16 1
TIGR_CMR|DET_0526 - symbol:DET_0526 "pmbA/tldD family pro... 227 9.8e-16 1
UNIPROTKB|Q5LMX0 - symbol:SPO3442 "PmbA" species:246200 "... 199 1.6e-12 1
TIGR_CMR|SPO_3442 - symbol:SPO_3442 "pmbA protein" specie... 199 1.6e-12 1
UNIPROTKB|Q88AI1 - symbol:PSPTO_0409 "TldD/PmbA family pr... 177 4.4e-10 1
UNIPROTKB|Q60BT2 - symbol:pmbA "PmbA protein" species:243... 168 6.7e-10 2
UNIPROTKB|Q60AT9 - symbol:MCA0755 "TldD/PmbA family prote... 173 9.5e-10 1
UNIPROTKB|P0AFK0 - symbol:pmbA "protease involved in Micr... 171 1.7e-09 1
UNIPROTKB|Q47VH3 - symbol:pmbA "PmbA protein" species:167... 170 2.3e-09 1
TIGR_CMR|CPS_4551 - symbol:CPS_4551 "pmbA protein" specie... 170 2.3e-09 1
TIGR_CMR|CBU_0741 - symbol:CBU_0741 "PmbA protein" specie... 170 3.3e-09 2
UNIPROTKB|Q8EA31 - symbol:tldE "Microcin-processing pepti... 166 6.1e-09 1
TIGR_CMR|SO_4078 - symbol:SO_4078 "pmba protein" species:... 166 6.1e-09 1
UNIPROTKB|Q0C2G2 - symbol:pmbA "PmbA protein" species:228... 158 4.6e-08 1
UNIPROTKB|Q9KP44 - symbol:VC_2535 "PmbA protein" species:... 158 3.0e-07 2
TIGR_CMR|VC_2535 - symbol:VC_2535 "pmbA protein" species:... 158 3.0e-07 2
>TIGR_CMR|CPS_4553 [details] [associations]
symbol:CPS_4553 "tldD protein" species:167879 "Colwellia
psychrerythraea 34H" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
Pfam:PF01523 EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG0312
InterPro:IPR002510 MEROPS:U62.002 HOGENOM:HOG000224929 KO:K03568
InterPro:IPR025502 PIRSF:PIRSF004919 RefSeq:YP_271201.1
ProteinModelPortal:Q47VH1 STRING:Q47VH1 GeneID:3520930
KEGG:cps:CPS_4553 PATRIC:21471929 OMA:TIDMDDE
ProtClustDB:CLSK742452 BioCyc:CPSY167879:GI48-4562-MONOMER
Uniprot:Q47VH1
Length = 481
Score = 1382 (491.5 bits), Expect = 2.6e-141, P = 2.6e-141
Identities = 271/482 (56%), Positives = 351/482 (72%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+NI LL +DE++L K L +M +VDYADFYFQ +++E W+LE+GIVK G+++I
Sbjct: 1 MNIVEKSLLSDSHIDEEMLSKTLNSMMGRQVDYADFYFQASQHETWVLEDGIVKEGSYNI 60
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGXXXXXXXXXXXXXXSLY 381
+GVGVRAISG+KT F YSDDI+ L A + + IA+ G +Y
Sbjct: 61 ERGVGVRAISGEKTGFAYSDDITPEALQKAADAAKGIADSGTGASVKAFSRQSPI--EVY 118
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + S+ +KI LL +VE AR D RV +VIA++SG Y+ IL++ +DG DIR
Sbjct: 119 QSVEPLGSLTQEQKIDLLHQVEAHARQVDSRVKQVIASISGVYETILVSASDGTFGTDIR 178
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMIL--EK-----CVSNSVNSALINL 494
PLV+L +++VE+NG+RE ++G G R +Y+YF ++ K SV AL+NL
Sbjct: 179 PLVRLNCSVLVEENGKRERASAGGGARTDYSYFFEVEAGDNKPRYLAYAEESVRQALVNL 238
Query: 495 EAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVD 554
A APAG VVLG GWPG+LLHEA+GHGLEGDFNRKGSSAFS +G+++ S+ TIVD
Sbjct: 239 VAIEAPAGTFPVVLGAGWPGVLLHEAVGHGLEGDFNRKGSSAFSGKVGQQVTSELCTIVD 298
Query: 555 NGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHI 614
+GTLANRRGSI+IDDEG P Q LIE GILKGYMQD NA LM + TGN RRES+AH+
Sbjct: 299 DGTLANRRGSISIDDEGTPGQYNVLIEKGILKGYMQDKHNAGLMGVKPTGNGRRESYAHL 358
Query: 615 PIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKI 674
P+PRMTNTYML G+ PE+II SVK G+YA NF+GGQVDIT+GKFVF++S+AY+I++GKI
Sbjct: 359 PMPRMTNTYMLAGESSPEDIIKSVKKGIYAPNFAGGQVDITSGKFVFTSSEAYLIEDGKI 418
Query: 675 TYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVG 734
T PVKGATLIG+GP +K++SM+GND+KLD GVGVCGKDGQ +PVGVGQPTLK+D +T+G
Sbjct: 419 TSPVKGATLIGNGPEAMKRISMVGNDLKLDAGVGVCGKDGQSIPVGVGQPTLKVDEMTIG 478
Query: 735 GT 736
GT
Sbjct: 479 GT 480
>UNIPROTKB|P0AGG8 [details] [associations]
symbol:tldD "protease involved in Microcin B17 maturation
and in sensitivity to the DNA gyrase inhibitor LetD" species:83333
"Escherichia coli K-12" [GO:0006508 "proteolysis" evidence=IMP]
Pfam:PF01523 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U18997 eggNOG:COG0312
InterPro:IPR002510 EMBL:D44451 PIR:F65116 RefSeq:NP_417711.1
RefSeq:YP_491428.1 ProteinModelPortal:P0AGG8 DIP:DIP-47845N
IntAct:P0AGG8 MEROPS:U62.002 PaxDb:P0AGG8 PRIDE:P0AGG8
EnsemblBacteria:EBESCT00000001933 EnsemblBacteria:EBESCT00000016796
GeneID:12931803 GeneID:947749 KEGG:ecj:Y75_p3164 KEGG:eco:b3244
PATRIC:32121914 EchoBASE:EB2677 EcoGene:EG12826
HOGENOM:HOG000224929 KO:K03568 OMA:IADRRGS ProtClustDB:PRK10735
BioCyc:EcoCyc:G7689-MONOMER BioCyc:ECOL316407:JW3213-MONOMER
Genevestigator:P0AGG8 InterPro:IPR025502 PIRSF:PIRSF004919
Uniprot:P0AGG8
Length = 481
Score = 1359 (483.5 bits), Expect = 7.2e-139, P = 7.2e-139
Identities = 262/480 (54%), Positives = 350/480 (72%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
LN+ LL L + L ILG + + ++DY D YFQ + +E+W+LE+ I+K G+++I
Sbjct: 3 LNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGXXXXXXXXXXXXXXSLY 381
+QGVGVRAISG+KT F Y+D IS L + ++ R+I S LY
Sbjct: 63 DQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRDSGDGKVQTLGAVEHS--PLY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ D + S++ EK+ +L RV+K+AR D RV +V A+LSG Y++IL+ DG + AD+R
Sbjct: 121 TSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADVR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFT-----DMILEKCVSNSVNSALINLEA 496
PLV+L V+++VE++G+RE G SG GGR+ Y +F ++ + +V AL+NL A
Sbjct: 181 PLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLSA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNR+G+S FS +G+ +AS+ T+VD+G
Sbjct: 241 VAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
T+ +RRGS+ IDDEG P Q LIENGILKGYMQD +NARLM M+ TGN RRES+AH+P+
Sbjct: 301 TMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML GK P+EII SV+ G+YA NF GGQVDIT+GKFVFS S+AY+I+NGK+T
Sbjct: 361 PRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTK 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
PVKGATLIG G ++++SM+GND+KLD GVGVCGK+GQ +PVGVGQPTLK+D++TVGGT
Sbjct: 421 PVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGGT 480
>TIGR_CMR|SO_4091 [details] [associations]
symbol:SO_4091 "tldD protein" species:211586 "Shewanella
oneidensis MR-1" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
Pfam:PF01523 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR002510 MEROPS:U62.002 HOGENOM:HOG000224929 KO:K03568
OMA:IADRRGS InterPro:IPR025502 PIRSF:PIRSF004919 RefSeq:NP_719621.1
GeneID:1171705 KEGG:son:SO_4091 PATRIC:23527826
ProtClustDB:CLSK907488 Uniprot:Q8EA18
Length = 482
Score = 1348 (479.6 bits), Expect = 1.1e-137, P = 1.1e-137
Identities = 263/479 (54%), Positives = 354/479 (73%)
Query: 264 IARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQ 323
+ +S+L LD L + L ++ ++KVD++D YFQ +++E+W+LE+GI+K G+F I +
Sbjct: 7 VEQSLLKGGLALDG--LQQYLNSIHQHKVDFSDLYFQGSRHESWVLEDGIIKDGSFHIER 64
Query: 324 GVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGXXXXXXXXXXXXXXSLYSF 383
GVGVRAISG+KT F Y+DDI+ L AV++ R IA S G +LY
Sbjct: 65 GVGVRAISGEKTGFAYADDITPAALTAAVEAARGIA--SAGEQTQVQAFKRQKALALYDS 122
Query: 384 TDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPL 443
D I+++ +KI LL+ + R D R+I+V+ +L+G ++ IL+ +DG + ADIRPL
Sbjct: 123 LDPIAAMEEVKKINLLKEADAFIRSLDSRIIQVVVSLAGVHEEILVAASDGTLAADIRPL 182
Query: 444 VQLFVTIIVEKNGRREIGNSGCGGRYNYNYFT---DMILEKCVS---NSVNSALINLEAK 497
V+ ++I+E+NG+RE G +G GGR++Y+ D L C + +V A +NL A
Sbjct: 183 VRFNCSVILEENGKRERGGAGGGGRHDYSVLMVNDDTGLPMCFAFAREAVRQAQVNLNAI 242
Query: 498 PAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGT 557
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSSAFS +G+++ASK +T+VD+GT
Sbjct: 243 DAPAGEMTVVLGNGWPGVLLHEAVGHGLEGDFNRKGSSAFSGMVGQQVASKLVTVVDDGT 302
Query: 558 LANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIP 617
LANRRGS++IDDEG TQ T LIE+GILKGY+QD +NARLM ++ TGN RRES+AH+P+P
Sbjct: 303 LANRRGSLSIDDEGVQTQRTVLIEDGILKGYLQDKLNARLMGVAPTGNGRRESYAHLPMP 362
Query: 618 RMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYP 677
RMTNTYM +G+ P +II SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NG++T
Sbjct: 363 RMTNTYMTSGESEPSDIIKSVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIENGEVTQA 422
Query: 678 VKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
+KGATLIG+GP + ++SM+GNDM LD GVGVCGKDGQ VPVGVGQPTLK+D +TVGGT
Sbjct: 423 IKGATLIGNGPEAMSQISMVGNDMALDKGVGVCGKDGQSVPVGVGQPTLKLDKLTVGGT 481
>TIGR_CMR|CBU_1467 [details] [associations]
symbol:CBU_1467 "TldD protein" species:227377 "Coxiella
burnetii RSA 493" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006109
"regulation of carbohydrate metabolic process" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0016071 "mRNA metabolic process" evidence=ISS]
Pfam:PF01523 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR002510 MEROPS:U62.002 HOGENOM:HOG000224929 KO:K03568
OMA:IADRRGS InterPro:IPR025502 PIRSF:PIRSF004919 RefSeq:NP_820450.1
PRIDE:Q83BN6 GeneID:1209377 KEGG:cbu:CBU_1467 PATRIC:17931695
ProtClustDB:CLSK914800 BioCyc:CBUR227377:GJ7S-1455-MONOMER
Uniprot:Q83BN6
Length = 477
Score = 1347 (479.2 bits), Expect = 1.3e-137, P = 1.3e-137
Identities = 262/476 (55%), Positives = 343/476 (72%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+ A LL PF+L+ +L KI+G VD AD + Q + E+W LE+GIVK GNFSI
Sbjct: 5 IQTASDSLLRPFNLNANVLEKIIGRAMGRSVDGADIFLQSIQEESWFLEDGIVKEGNFSI 64
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGXXXXXXXXXXXXXXSLY 381
+ G G+R +SG++T F ++DDI+ L+ A S +SIA +G LY
Sbjct: 65 DHGFGLRVLSGEETGFAFADDINAKALLQAAHSAKSIAYSQSGQAINVLHKTLVR--PLY 122
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
++ I+S+ + LL RV+ AR KDPRV +VI +L+G+++V+LI +DGL+ AD+R
Sbjct: 123 LPSNPINSMPAASIVDLLRRVDDYARAKDPRVKQVIVSLTGQHEVVLILNSDGLMAADLR 182
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPA 501
PLV + V +IVE+NG+R G++G G R Y FT + +V+ A +NL+A APA
Sbjct: 183 PLVSMRVRVIVEENGQRAQGSAGGGARGGYETFTSAAFQYA-DKAVHQACLNLKADNAPA 241
Query: 502 GIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANR 561
G +VLGPGWP ILLHEAIGHGLEGDFNRKGSSAFS +G+R+AS T+VD+GT+ R
Sbjct: 242 GTFPIVLGPGWPAILLHEAIGHGLEGDFNRKGSSAFSGRLGERVASSLCTVVDDGTVPGR 301
Query: 562 RGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTN 621
RGS++IDDEG TQ T LIE GILK YMQD NA LM MS TGN RRES+AH+P+PRMTN
Sbjct: 302 RGSLSIDDEGTMTQKTVLIEKGILKNYMQDRHNAHLMKMSPTGNGRRESYAHLPLPRMTN 361
Query: 622 TYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGA 681
TY+L G+ P+EII+SV+ GLYA +FSGGQVDIT+GKFVFS S+AY+I+ GK+T PVKGA
Sbjct: 362 TYLLPGESDPQEIIASVERGLYAVDFSGGQVDITSGKFVFSTSEAYLIEKGKVTRPVKGA 421
Query: 682 TLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGTN 737
TLIG+GP++L KVSM+GND+ LD G+G CGK GQ VPVGVGQPT+K+D++TVGG +
Sbjct: 422 TLIGNGPDVLTKVSMVGNDLALDSGIGTCGKAGQSVPVGVGQPTIKVDALTVGGVD 477
>UNIPROTKB|Q48EA2 [details] [associations]
symbol:tldD "TldD protein" species:264730 "Pseudomonas
syringae pv. phaseolicola 1448A" [GO:0003674 "molecular_function"
evidence=ND] Pfam:PF01523 EMBL:CP000058 GenomeReviews:CP000058_GR
eggNOG:COG0312 InterPro:IPR002510 MEROPS:U62.002
HOGENOM:HOG000224929 KO:K03568 OMA:IADRRGS InterPro:IPR025502
PIRSF:PIRSF004919 RefSeq:YP_276286.1 STRING:Q48EA2 GeneID:3558829
KEGG:psp:PSPPH_4164 PATRIC:19977803 ProtClustDB:CLSK868680
Uniprot:Q48EA2
Length = 479
Score = 1346 (478.9 bits), Expect = 1.7e-137, P = 1.7e-137
Identities = 262/469 (55%), Positives = 344/469 (73%)
Query: 269 LLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVR 328
LL P L L +LG + +D AD YFQ +E+W LE+GIVK G+F+++QGVGVR
Sbjct: 11 LLAPGGLSLDSLQSVLGELAGPGIDAADLYFQGMISESWSLEDGIVKEGSFNLDQGVGVR 70
Query: 329 AISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGXXXXXXXXXXXXXXSLYSFTDTIS 388
A SG+KT F YS+ I+++ L A ++ RSI+ G LY+ + +
Sbjct: 71 AQSGEKTGFAYSNAITEDALRTAARAARSISRA--GQNGRVQAFTSQDVAQLYAPDNPLE 128
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFV 448
++ EK++LL+R++ R D R+ +V +++G ++ IL+ DG + AD+RPLV+ V
Sbjct: 129 VLSRAEKVELLKRIDVATRALDSRIQQVSVSMAGVWERILVAAADGSLAADVRPLVRFNV 188
Query: 449 TIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
++IVE+NGRRE G G GGR +Y YF TD ++ AL+NLEA PAPAG + VV
Sbjct: 189 SVIVEQNGRRERGGHGGGGRTDYRYFLTDDRAMGYAREALRQALVNLEAIPAPAGTLPVV 248
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINI 567
LG GW G+LLHEA+GHGLEGDFNRKGSSA+S +G+ +ASK TIVD+GTLA RRGS+++
Sbjct: 249 LGSGWSGVLLHEAVGHGLEGDFNRKGSSAYSGRMGEMVASKLCTIVDDGTLAGRRGSLSV 308
Query: 568 DDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNG 627
DDEG PT+CTTLIE+G+LKGYMQD +NARLM ++ TGN RRES+AH+P+PRMTNTYML G
Sbjct: 309 DDEGTPTECTTLIESGVLKGYMQDKLNARLMGVARTGNGRRESYAHLPMPRMTNTYMLGG 368
Query: 628 KFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG 687
+ P+EII+SVK G+Y N GGQVDIT+GKFVFS S+AY+I++GKIT PVKGATLIG+G
Sbjct: 369 QSDPQEIIASVKRGIYCANLGGGQVDITSGKFVFSTSEAYLIEDGKITAPVKGATLIGNG 428
Query: 688 PNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P + +VSM+GND+ LD GVG CGKDGQ +PVGVGQPTLKID+ITVGGT
Sbjct: 429 PEAMSRVSMVGNDLSLDSGVGTCGKDGQSLPVGVGQPTLKIDAITVGGT 477
>UNIPROTKB|Q9KUU3 [details] [associations]
symbol:VC_0422 "TldD protein" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] Pfam:PF01523 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003700 InterPro:IPR002510
KO:K03568 OMA:IADRRGS InterPro:IPR025502 PIRSF:PIRSF004919
PIR:G82325 RefSeq:NP_230076.1 ProteinModelPortal:Q9KUU3
DNASU:2615683 GeneID:2615683 KEGG:vch:VC0422 PATRIC:20079925
ProtClustDB:CLSK873972 Uniprot:Q9KUU3
Length = 481
Score = 1279 (455.3 bits), Expect = 2.2e-130, P = 2.2e-130
Identities = 252/480 (52%), Positives = 336/480 (70%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N + LL P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 MNQIETALLAPAGLTEQDIADTLSSIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGXXXXXXXXXXXXXXSLY 381
+ GVGVRA+SG+KT F YSD I L + + R IA Q G + Y
Sbjct: 63 DCGVGVRAVSGEKTGFAYSDQIQLEGLKQSAIAARGIAQQ--GQNLTVQAFKRAQHPAFY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + S ++K +LL++++ R K+P + +V +LSG ++ IL+ DG DIR
Sbjct: 121 GAHNPLESWEKQQKTELLKQLDAYIRTKEPLITEVSVSLSGVHEQILVAATDGTYAGDIR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTD-----MILEKCVSNSVNSALINLEA 496
PLV+L ++++ +K RRE G++G GGR+ Y+YF I ++ AL+NLEA
Sbjct: 181 PLVRLSISVLAQKGDRRERGSAGGGGRFGYDYFLQEEAGQKIAFSFADEAIRQALVNLEA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS F+ +GK++ S TIVD+G
Sbjct: 241 VAAPAGTMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSVFAGKVGKKVTSDLCTIVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL + RGS+N+DDEG Q LIE GILKGY+QD +NARLM ++ TGN RRES+AH+P+
Sbjct: 301 TLKDLRGSLNVDDEGVSGQYNVLIEKGILKGYIQDKLNARLMGVAPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ PEEII+SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 361 PRMTNTYMLPGEHTPEEIIASVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIENGKITR 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG G +++VSM+GND+ LD GVGVCGK GQ VPVGVGQPTLK+D++TVGGT
Sbjct: 421 PIKGATLIGSGIEAMQQVSMVGNDLALDRGVGVCGKAGQSVPVGVGQPTLKLDALTVGGT 480
>TIGR_CMR|VC_0422 [details] [associations]
symbol:VC_0422 "tldD protein" species:686 "Vibrio cholerae
O1 biovar El Tor" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
Pfam:PF01523 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003700
InterPro:IPR002510 KO:K03568 OMA:IADRRGS InterPro:IPR025502
PIRSF:PIRSF004919 PIR:G82325 RefSeq:NP_230076.1
ProteinModelPortal:Q9KUU3 DNASU:2615683 GeneID:2615683
KEGG:vch:VC0422 PATRIC:20079925 ProtClustDB:CLSK873972
Uniprot:Q9KUU3
Length = 481
Score = 1279 (455.3 bits), Expect = 2.2e-130, P = 2.2e-130
Identities = 252/480 (52%), Positives = 336/480 (70%)
Query: 262 LNIARSILLEPFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSI 321
+N + LL P L E+ + L ++ ++DYAD YFQ + +E+ +LE+ I+K G+F+I
Sbjct: 3 MNQIETALLAPAGLTEQDIADTLSSIATRQIDYADIYFQSSWHESLVLEDSIIKDGSFNI 62
Query: 322 NQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGXXXXXXXXXXXXXXSLY 381
+ GVGVRA+SG+KT F YSD I L + + R IA Q G + Y
Sbjct: 63 DCGVGVRAVSGEKTGFAYSDQIQLEGLKQSAIAARGIAQQ--GQNLTVQAFKRAQHPAFY 120
Query: 382 SFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIR 441
+ + S ++K +LL++++ R K+P + +V +LSG ++ IL+ DG DIR
Sbjct: 121 GAHNPLESWEKQQKTELLKQLDAYIRTKEPLITEVSVSLSGVHEQILVAATDGTYAGDIR 180
Query: 442 PLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTD-----MILEKCVSNSVNSALINLEA 496
PLV+L ++++ +K RRE G++G GGR+ Y+YF I ++ AL+NLEA
Sbjct: 181 PLVRLSISVLAQKGDRRERGSAGGGGRFGYDYFLQEEAGQKIAFSFADEAIRQALVNLEA 240
Query: 497 KPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNG 556
APAG M VVLG GWPG+LLHEA+GHGLEGDFNRKGSS F+ +GK++ S TIVD+G
Sbjct: 241 VAAPAGTMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSVFAGKVGKKVTSDLCTIVDDG 300
Query: 557 TLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPI 616
TL + RGS+N+DDEG Q LIE GILKGY+QD +NARLM ++ TGN RRES+AH+P+
Sbjct: 301 TLKDLRGSLNVDDEGVSGQYNVLIEKGILKGYIQDKLNARLMGVAPTGNGRRESYAHLPM 360
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
PRMTNTYML G+ PEEII+SVK G+YA NF GGQVDIT+GKFVFSAS+AY+I+NGKIT
Sbjct: 361 PRMTNTYMLPGEHTPEEIIASVKKGIYAPNFGGGQVDITSGKFVFSASEAYLIENGKITR 420
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
P+KGATLIG G +++VSM+GND+ LD GVGVCGK GQ VPVGVGQPTLK+D++TVGGT
Sbjct: 421 PIKGATLIGSGIEAMQQVSMVGNDLALDRGVGVCGKAGQSVPVGVGQPTLKLDALTVGGT 480
>TIGR_CMR|ECH_0152 [details] [associations]
symbol:ECH_0152 "tldD protein" species:205920 "Ehrlichia
chaffeensis str. Arkansas" [GO:0030234 "enzyme regulator activity"
evidence=ISS] Pfam:PF01523 EMBL:CP000236 GenomeReviews:CP000236_GR
eggNOG:COG0312 InterPro:IPR002510 MEROPS:U62.002
HOGENOM:HOG000224929 KO:K03568 OMA:IADRRGS InterPro:IPR025502
PIRSF:PIRSF004919 RefSeq:YP_506979.1 STRING:Q2GHV4 GeneID:3927786
KEGG:ech:ECH_0152 PATRIC:20575847 ProtClustDB:CLSK749576
BioCyc:ECHA205920:GJNR-152-MONOMER Uniprot:Q2GHV4
Length = 467
Score = 1161 (413.8 bits), Expect = 6.9e-118, P = 6.9e-118
Identities = 230/445 (51%), Positives = 314/445 (70%)
Query: 293 DYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAV 352
D + + + +E+ LE GI+K +F+ +QG G+R+ + TAF S +I++ + NA
Sbjct: 25 DGGELFLEMCVSESLGLENGILKYADFNSHQGFGLRSFCKELTAFVCSSEITEQEIENAA 84
Query: 353 KSTRSIANQSNGXXXXXXXXXXXXXXSLYSFTDTISSINIREKIKLLERVEKIARLKDPR 412
+SI N ++G LY T+ + ++ K+KLL++V+ K P
Sbjct: 85 ALVKSINNSNSGGIVHLNKAKPI----LYPETNPLQKMDFDLKVKLLQQVDDYLHSKSPY 140
Query: 413 VIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYN 472
V +V ++LSG++ ++ I G V D+RPL++ V +I+EK+GR+E G+SG GGR +Y
Sbjct: 141 VRQVKSSLSGQWQIVYIILPTGDRVYDVRPLIRFNVCVILEKDGRKESGSSGHGGRASYE 200
Query: 473 YFT-DMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNR 531
F D + ++ AL+NLE+ P PAG M VVLGPGWPG+LLHEA+GHGLEGDFNR
Sbjct: 201 EFIGDGKWQMVADEALRQALVNLESVPTPAGEMTVVLGPGWPGVLLHEAVGHGLEGDFNR 260
Query: 532 KGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQD 591
K SAFS IGK++A+K +T+VD+GT+ RRGSINIDDEG + LI++GIL YMQD
Sbjct: 261 KKVSAFSTSIGKKVAAKGVTVVDDGTIPGRRGSINIDDEGVSSGYNVLIQDGILVNYMQD 320
Query: 592 IMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQ 651
MNA LM + TGN RR+S+ + +PRMTNTYML G + PEEII+SVK G+YA +FSGGQ
Sbjct: 321 RMNANLMGTTSTGNGRRQSYQDVVMPRMTNTYMLPGSYCPEEIIASVKKGVYAVHFSGGQ 380
Query: 652 VDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCG 711
VDIT+GKFVFSAS+ Y+I++GK+T PVKGAT+IG+GP++L KVSM+G+D+KLDPG+G C
Sbjct: 381 VDITSGKFVFSASEGYLIEDGKVTCPVKGATIIGNGPDVLTKVSMVGDDLKLDPGIGTCS 440
Query: 712 KDGQMVPVGVGQPTLKIDSITVGGT 736
K+GQ VPVGVGQPTLKIDSI VGGT
Sbjct: 441 KNGQDVPVGVGQPTLKIDSIIVGGT 465
>TIGR_CMR|APH_1310 [details] [associations]
symbol:APH_1310 "TldD protein" species:212042 "Anaplasma
phagocytophilum HZ" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006109
"regulation of carbohydrate metabolic process" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0016071 "mRNA metabolic process" evidence=ISS]
Pfam:PF01523 EMBL:CP000235 GenomeReviews:CP000235_GR eggNOG:COG0312
InterPro:IPR002510 MEROPS:U62.002 HOGENOM:HOG000224929 KO:K03568
OMA:IADRRGS InterPro:IPR025502 PIRSF:PIRSF004919
ProtClustDB:CLSK749576 RefSeq:YP_505823.1 STRING:Q2GIH8
GeneID:3930087 KEGG:aph:APH_1310 PATRIC:20951416
BioCyc:APHA212042:GHPM-1311-MONOMER Uniprot:Q2GIH8
Length = 473
Score = 1109 (395.4 bits), Expect = 2.2e-112, P = 2.2e-112
Identities = 228/475 (48%), Positives = 308/475 (64%)
Query: 270 LEPFDLDEKILLKILGNMFKNKV-------DYADFYFQFTKNENWILEEGIVKTGNFSIN 322
+E FD+D+ + N K V D + + +F +E+ +E GI+K +FS
Sbjct: 1 MEEFDVDKVFYARADRNKLKTLVTDTLLCMDGGELFLEFCHSESLSIENGIIKNADFSFR 60
Query: 323 QGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGXXXXXXXXXXXXXXSLYS 382
+G G RA + S +IS + + A + I S LY
Sbjct: 61 KGFGFRAFRDGVASLVCSSEISDSEIQKAASLLKHIGQGS----VDVVQLCQSGSRRLYP 116
Query: 383 FTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRP 442
+ I K+++L+ ++ R +P V++V ++S ++ V+ I RNDG V D+RP
Sbjct: 117 TESPVGEIPFASKVQILQDIDAYLRGANPHVVQVKVSISTQWQVVQIIRNDGNTVGDMRP 176
Query: 443 LVQLFVTIIVEKNGRREIGNSGCGGRYNYNYF-TDMILEKCVSNSVNSALINLEAKPAPA 501
LV+L + ++VEK GR+E G G GGR + F T+ +K ++ A+ N+EA APA
Sbjct: 177 LVRLDIYVLVEKGGRKEHGRGGHGGRALCSEFITEDQWKKIADGALRQAMTNMEAVAAPA 236
Query: 502 GIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANR 561
G + VVLGPG+PG+LLHEA+GHGLE DFNRK SAFS+ IG R+A+ IT+VD+GT+ R
Sbjct: 237 GEITVVLGPGFPGVLLHEAVGHGLESDFNRKKVSAFSDAIGTRVAAAGITVVDDGTMQGR 296
Query: 562 RGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTN 621
RGS+NIDDEG + LIE+GIL YM D MNA+LM ++ TGN RRES+ + IPRMTN
Sbjct: 297 RGSLNIDDEGTVSGYNVLIEDGILVSYMHDNMNAKLMGVTSTGNGRRESYKSMVIPRMTN 356
Query: 622 TYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGA 681
TYML G + P +IISSVK G+YA +F GGQVDIT+G+FVFSAS++Y+I+NGKI P+KGA
Sbjct: 357 TYMLPGTYTPNDIISSVKRGIYAADFGGGQVDITSGQFVFSASESYLIENGKIGSPLKGA 416
Query: 682 TLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
TL+G GP ILKKVSM+GND+ LDPG+G C KDGQ +PV VGQPTLKIDSITVGGT
Sbjct: 417 TLVGSGPEILKKVSMVGNDLALDPGIGTCSKDGQSIPVCVGQPTLKIDSITVGGT 471
>UNIPROTKB|Q5LNX6 [details] [associations]
symbol:SPO3077 "TldD/PmbA family protein" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003674 "molecular_function"
evidence=ND] Pfam:PF01523 EMBL:CP000031 GenomeReviews:CP000031_GR
InterPro:IPR002510 MEROPS:U62.002 HOGENOM:HOG000224929 KO:K03568
OMA:IADRRGS InterPro:IPR025502 PIRSF:PIRSF004919 RefSeq:YP_168280.1
ProteinModelPortal:Q5LNX6 GeneID:3195320 KEGG:sil:SPO3077
PATRIC:23379597 ProtClustDB:CLSK934045 Uniprot:Q5LNX6
Length = 473
Score = 1105 (394.0 bits), Expect = 5.9e-112, P = 5.9e-112
Identities = 208/442 (47%), Positives = 304/442 (68%)
Query: 296 DFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKST 355
+ + + K+E ++G +++ ++ ++G G+RA+ G+ + +S D+S +L A ++
Sbjct: 33 ELFVERRKSEALSFDDGRLRSASYDASEGFGLRAVKGEVAGYAHSTDVSIPSLRRAAETA 92
Query: 356 RSIANQSNGXXXXXXXXXXXXXXSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIK 415
R G LY+ D I S K++ L ++ AR D RV++
Sbjct: 93 RLAVGDGGGTLAGAPARTNR---KLYTEDDPIDSAAFPVKVETLREIDAFARDLDSRVVQ 149
Query: 416 VIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYN-YF 474
V A++ + I R DG+ + D+RP+ ++ V++IVE++GRRE G++G GGR +
Sbjct: 150 VSASIMASLQEVEILRPDGVHLRDVRPMTRVNVSVIVERDGRRESGSAGGGGRVGLDGLI 209
Query: 475 TDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGS 534
+ ++ AL+NL+A+PAPAG+M+V LGPGWPGILLHEAIGHGLEGDFNRKG+
Sbjct: 210 APEAWQAQAREALRIALVNLDAEPAPAGVMEVALGPGWPGILLHEAIGHGLEGDFNRKGT 269
Query: 535 SAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMN 594
SAF+ +G+++A++ +T+VD+GTL +RRGSI +DDEG P++ T LIE+GIL GYMQD N
Sbjct: 270 SAFAGLMGQQVAARGVTVVDDGTLPDRRGSITVDDEGTPSRRTVLIEDGILTGYMQDRQN 329
Query: 595 ARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDI 654
ARLM + TGN RR+S+AH P+PRMTNT ML G P ++++ +K+G++A F GGQVDI
Sbjct: 330 ARLMGVEPTGNGRRQSYAHKPMPRMTNTVMLGGNADPADLVAEIKDGIWAVGFGGGQVDI 389
Query: 655 TNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDG 714
TNGKFVFS ++AY ++NG+I PVKGATLIG GP+ L+++ +GNDM LDPG+G CGKDG
Sbjct: 390 TNGKFVFSCTEAYRVRNGRIGAPVKGATLIGDGPSALQRIRGLGNDMALDPGMGTCGKDG 449
Query: 715 QMVPVGVGQPTLKIDSITVGGT 736
Q VPVGVGQPT+ +D +TVGG+
Sbjct: 450 QWVPVGVGQPTVLMDGLTVGGS 471
>TIGR_CMR|SPO_3077 [details] [associations]
symbol:SPO_3077 "TldD protein" species:246200 "Ruegeria
pomeroyi DSS-3" [GO:0003674 "molecular_function" evidence=ND]
[GO:0006508 "proteolysis" evidence=ISS] Pfam:PF01523 EMBL:CP000031
GenomeReviews:CP000031_GR InterPro:IPR002510 MEROPS:U62.002
HOGENOM:HOG000224929 KO:K03568 OMA:IADRRGS InterPro:IPR025502
PIRSF:PIRSF004919 RefSeq:YP_168280.1 ProteinModelPortal:Q5LNX6
GeneID:3195320 KEGG:sil:SPO3077 PATRIC:23379597
ProtClustDB:CLSK934045 Uniprot:Q5LNX6
Length = 473
Score = 1105 (394.0 bits), Expect = 5.9e-112, P = 5.9e-112
Identities = 208/442 (47%), Positives = 304/442 (68%)
Query: 296 DFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKST 355
+ + + K+E ++G +++ ++ ++G G+RA+ G+ + +S D+S +L A ++
Sbjct: 33 ELFVERRKSEALSFDDGRLRSASYDASEGFGLRAVKGEVAGYAHSTDVSIPSLRRAAETA 92
Query: 356 RSIANQSNGXXXXXXXXXXXXXXSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIK 415
R G LY+ D I S K++ L ++ AR D RV++
Sbjct: 93 RLAVGDGGGTLAGAPARTNR---KLYTEDDPIDSAAFPVKVETLREIDAFARDLDSRVVQ 149
Query: 416 VIANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYN-YF 474
V A++ + I R DG+ + D+RP+ ++ V++IVE++GRRE G++G GGR +
Sbjct: 150 VSASIMASLQEVEILRPDGVHLRDVRPMTRVNVSVIVERDGRRESGSAGGGGRVGLDGLI 209
Query: 475 TDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGS 534
+ ++ AL+NL+A+PAPAG+M+V LGPGWPGILLHEAIGHGLEGDFNRKG+
Sbjct: 210 APEAWQAQAREALRIALVNLDAEPAPAGVMEVALGPGWPGILLHEAIGHGLEGDFNRKGT 269
Query: 535 SAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMN 594
SAF+ +G+++A++ +T+VD+GTL +RRGSI +DDEG P++ T LIE+GIL GYMQD N
Sbjct: 270 SAFAGLMGQQVAARGVTVVDDGTLPDRRGSITVDDEGTPSRRTVLIEDGILTGYMQDRQN 329
Query: 595 ARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDI 654
ARLM + TGN RR+S+AH P+PRMTNT ML G P ++++ +K+G++A F GGQVDI
Sbjct: 330 ARLMGVEPTGNGRRQSYAHKPMPRMTNTVMLGGNADPADLVAEIKDGIWAVGFGGGQVDI 389
Query: 655 TNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDG 714
TNGKFVFS ++AY ++NG+I PVKGATLIG GP+ L+++ +GNDM LDPG+G CGKDG
Sbjct: 390 TNGKFVFSCTEAYRVRNGRIGAPVKGATLIGDGPSALQRIRGLGNDMALDPGMGTCGKDG 449
Query: 715 QMVPVGVGQPTLKIDSITVGGT 736
Q VPVGVGQPT+ +D +TVGG+
Sbjct: 450 QWVPVGVGQPTVLMDGLTVGGS 471
>UNIPROTKB|Q0C3D7 [details] [associations]
symbol:tldD "TldD protein" species:228405 "Hyphomonas
neptunium ATCC 15444" [GO:0003674 "molecular_function" evidence=ND]
Pfam:PF01523 EMBL:CP000158 GenomeReviews:CP000158_GR eggNOG:COG0312
InterPro:IPR002510 MEROPS:U62.002 HOGENOM:HOG000224929 KO:K03568
OMA:IADRRGS InterPro:IPR025502 PIRSF:PIRSF004919 RefSeq:YP_759756.1
STRING:Q0C3D7 GeneID:4288367 KEGG:hne:HNE_1034 PATRIC:32214875
ProtClustDB:CLSK2531815 BioCyc:HNEP228405:GI69-1072-MONOMER
Uniprot:Q0C3D7
Length = 467
Score = 1104 (393.7 bits), Expect = 7.6e-112, P = 7.6e-112
Identities = 218/466 (46%), Positives = 311/466 (66%)
Query: 272 PFDLDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAIS 331
PFDL IL + D D Y + +++E+++ ++G +K+ + +QG G+R ++
Sbjct: 7 PFDLTAASA--ILAEATRG-ADDGDLYVERSRSESFVFDDGRLKSAAYDTDQGFGLRVVA 63
Query: 332 GDKTAFFYSDDISKNTLINAVKSTRSIANQSN-GXXXXXXXXXXXXXXSLYSFTDTISSI 390
G+ Y+ ++ ++A++ A Q+ G LY+ D +
Sbjct: 64 GEAQGSGYASQLT----LDAIRRAGDTAAQAKRGHSGTLATGPQPTNRRLYAPIDPTLAP 119
Query: 391 NIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDVILITRNDGLIVADIRPLVQLFVTI 450
+K LL ++ AR DPRV++V +LSG + I I R DG ++RPLV+L V++
Sbjct: 120 AFTDKTNLLAEIDAFARASDPRVVQVSVSLSGSHKEIDILRPDGAHFHEVRPLVRLNVSV 179
Query: 451 IVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSN-SVNSALINLEAKPAPAGIMKVVLG 509
+E+NGRRE +G GGR Y+ + K ++ ++ A +NL++ PAPAG M+VVLG
Sbjct: 180 TLEENGRRESAGAGAGGRAAYDEWIAPERWKAMARRAIEKASVNLKSIPAPAGEMEVVLG 239
Query: 510 PGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDD 569
PGWP +LLHEA+GHGLEGDFNRKG+S +S IG+++A++ +T++D+G++ RRGS++ DD
Sbjct: 240 PGWPAVLLHEAVGHGLEGDFNRKGTSVYSGQIGQQVAARGVTVIDDGSIEARRGSLSFDD 299
Query: 570 EGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKF 629
EG PTQ T LIE+GILKGYMQD MNARLM M+ TGN RRES+ +PRMTNT ML G
Sbjct: 300 EGTPTQRTVLIEDGILKGYMQDRMNARLMGMAPTGNGRRESYEAQTMPRMTNTVMLGGDK 359
Query: 630 HPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPN 689
P EI++S+K GL+A +F GGQVDIT+G FVF ++AY+++NGK+ PVK ATLIGHGP
Sbjct: 360 DPGEIVASIKRGLWAVDFGGGQVDITSGNFVFQCTEAYLVENGKVVAPVKNATLIGHGPT 419
Query: 690 ILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
+L+ V+MIGND +D GVGVCGK GQ +PVGVGQPTLK+ S+TVGG
Sbjct: 420 VLRDVTMIGNDFAMDDGVGVCGKAGQSIPVGVGQPTLKVGSLTVGG 465
>TIGR_CMR|NSE_0224 [details] [associations]
symbol:NSE_0224 "TldD protein" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006109 "regulation of carbohydrate metabolic
process" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0016071 "mRNA metabolic process"
evidence=ISS] Pfam:PF01523 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0312 InterPro:IPR002510 MEROPS:U62.002
HOGENOM:HOG000224929 KO:K03568 InterPro:IPR025502 PIRSF:PIRSF004919
RefSeq:YP_506118.1 ProteinModelPortal:Q2GEH8 STRING:Q2GEH8
GeneID:3931377 KEGG:nse:NSE_0224 PATRIC:22680545 OMA:GRRESYM
ProtClustDB:CLSK2527918 BioCyc:NSEN222891:GHFU-254-MONOMER
Uniprot:Q2GEH8
Length = 477
Score = 1007 (359.5 bits), Expect = 1.4e-101, P = 1.4e-101
Identities = 207/446 (46%), Positives = 278/446 (62%)
Query: 293 DYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAV 352
D + + +++ +E E+G++ N++ + G G+RA GDK + +S +S ++ A
Sbjct: 33 DGGELFVEYSLSEILKFEDGVLAESNYADSSGFGLRAFYGDKVLYTHSSHLSDASIFEAS 92
Query: 353 KSTRSIANQSNGXXXXXXXXXXXXXXSLYSFTDTISSINIREKIKLLERVEKIARLKDPR 412
R LY F S + K+ L +V A K
Sbjct: 93 DFIRKNRLADGSAMTAEAAHETACGDPLYKFEIQDDSFSFERKVAFLRQVYDYALSKSVN 152
Query: 413 VIKVIANLSGEYDVILITRNDGLIVADIRPLVQL-FVTIIVEKNGRREIGNSGCGGRYNY 471
+ L I I +N G V D +P+V+L F ++ + G + G SG GGR+
Sbjct: 153 IASASVTLMRFVRRIGIIKNTGGTVTDEQPMVRLGFSVVLKNEKGGAQGGTSGKGGRFAL 212
Query: 472 N-YFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFN 530
+ D + V + + A + L A P P+G M VVLG GWPG+LLHEAIGHGLE DFN
Sbjct: 213 SELMKDWYV--VVDRAFHKAEVALRAVPCPSGEMTVVLGSGWPGVLLHEAIGHGLEADFN 270
Query: 531 RKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQ 590
RKG SAFS IGK++AS +++VDNG + RGSIN+DDEG + LI++GIL+GYM
Sbjct: 271 RKGVSAFSGLIGKKVASDVVSVVDNGRINEARGSINVDDEGTRSSYNVLIKDGILQGYMF 330
Query: 591 DIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGG 650
D+MNARLM TGN RRES+ +IP+PRMTNTYML G P+EII S+K+G+YA +FSGG
Sbjct: 331 DLMNARLMGEQSTGNGRRESYMNIPLPRMTNTYMLPGDKTPDEIIKSIKSGIYAVDFSGG 390
Query: 651 QVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVC 710
QVDIT+GKFVFSAS+AY+I++G++T PVK TLIG GP ILK++S +GND+KLD GVG C
Sbjct: 391 QVDITSGKFVFSASEAYLIEDGEVTVPVKEVTLIGDGPTILKRISAVGNDLKLDDGVGTC 450
Query: 711 GKDGQMVPVGVGQPTLKIDSITVGGT 736
GKDGQ VPV VGQPT+ +D ITVGGT
Sbjct: 451 GKDGQSVPVCVGQPTICVDKITVGGT 476
>TIGR_CMR|CHY_0642 [details] [associations]
symbol:CHY_0642 "tldD protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0015976 "carbon
utilization" evidence=ISS] [GO:0030234 "enzyme regulator activity"
evidence=ISS] Pfam:PF01523 EMBL:CP000141 GenomeReviews:CP000141_GR
eggNOG:COG0312 InterPro:IPR002510 MEROPS:U62.002
HOGENOM:HOG000224929 KO:K03568 InterPro:IPR025502 PIRSF:PIRSF004919
RefSeq:YP_359498.1 STRING:Q3AED6 GeneID:3728585 KEGG:chy:CHY_0642
PATRIC:21274423 OMA:VRMTNTF BioCyc:CHYD246194:GJCN-642-MONOMER
Uniprot:Q3AED6
Length = 462
Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
Identities = 166/465 (35%), Positives = 251/465 (53%)
Query: 275 LDEKILLKILGNMFKNKVDYADFYFQFTKNENWILEEGIVKTGNFSINQGVGVRAISGD- 333
+D + ++L + +A+ YF+ N +LE+G ++ G G+R I +
Sbjct: 1 MDNFTINEVLREAARRGAPFAEIYFEEKNNFGLVLEDGKIEKVTQGYEAGAGIRVIDDNG 60
Query: 334 KTAFFYSDDISKNTLINAVK-STRSIANQSNGXXXXXXXXXXXXXXSLYSFTDTISSINI 392
+T + Y++D+S L+ AV+ +T + NG +
Sbjct: 61 RTTYAYTNDLSLEALLKAVRVATLGL----NGLKDSVSLENPEVTSGNVQIKP--GEVAA 114
Query: 393 REKIKLLERVEKIARLKDPRVIKVIANLSGEYDV-ILITRNDGLIVADIRPLVQLFVTII 451
EK+ LL+ ++ R P + +V A+ GE + ++I +G V + V+ V +
Sbjct: 115 EEKLNLLKVADEEIRRLGPEIRQVQASY-GELEAKVVIANTEGTYVEMNKTRVRFAVQAV 173
Query: 452 VEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPG 511
EK+G + G G + F + ++ + A+ L A+PAP+G M VV+
Sbjct: 174 AEKDGVIQTGYDAIGTTKGFETFKEQQVDVAARAAGERAIKMLSAEPAPSGEMPVVMAGE 233
Query: 512 WPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEG 571
G ++HEA GHGLE D +K S ++ G+++AS IT+VD+GT+ + G++ DDEG
Sbjct: 234 AGGTMIHEASGHGLEADIVQKRMSVYAGKKGQKVASPLITVVDDGTIPGKYGTVPYDDEG 293
Query: 572 NPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHP 631
N T+ LI+ GIL GYM D + A+ N+ TGN RRES+ H PIPRMTNTY+ G+ P
Sbjct: 294 NKTKKNVLIDRGILTGYMYDRLTAKKDNVEPTGNGRRESYQHKPIPRMTNTYIAPGEDDP 353
Query: 632 EEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNIL 691
E+II VK GL GGQVD G FVF S+ Y+I++G++T PV+GATL G+GP +L
Sbjct: 354 EKIIREVKEGLLVKKMGGGQVDTNTGDFVFEVSEGYLIEDGQVTVPVRGATLTGNGPKVL 413
Query: 692 KKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
V +G D L +G CGKDGQ VPV QPTL I ++ VGGT
Sbjct: 414 NNVLAVGKD--LGWSIGTCGKDGQGVPVSDAQPTLLIGNLVVGGT 456
>UNIPROTKB|Q3Z928 [details] [associations]
symbol:DET0527 "TldD/PmbA family protein" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF01523 EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG0312
InterPro:IPR002510 KO:K03568 InterPro:IPR025502 PIRSF:PIRSF004919
RefSeq:YP_181271.1 STRING:Q3Z928 GeneID:3230164 KEGG:det:DET0527
PATRIC:21608121 HOGENOM:HOG000224930 OMA:RADYLEI
ProtClustDB:CLSK2767671 BioCyc:DETH243164:GJNF-527-MONOMER
Uniprot:Q3Z928
Length = 458
Score = 422 (153.6 bits), Expect = 5.8e-39, P = 5.8e-39
Identities = 130/457 (28%), Positives = 204/457 (44%)
Query: 287 MFKNKVDYADFYFQFTKNENWILEEGI-VKTGNFSINQGVGVRAISGDKTAFFYSDDISK 345
++ + DY + + + + ++I G + T S + G +RA+ F +S
Sbjct: 15 LYHYRADYLEIHLEESSG-SYISYRGQNLDTAGRSSDLGGNIRALVNGGWGF-----VSF 68
Query: 346 NTLINAVKSTRSIANQSNGXXXXXXXXXXXXXXSLYSFTDTISSINIREKIKLLERVEKI 405
N+L + K +Q+ Y+ D +S ++ ++ +RV +
Sbjct: 69 NSLDDIQKRIDQAIHQA-ALAGSAQSQFASAPSVTYAQPDELSQSSVERPLEDKKRV--L 125
Query: 406 ARLKD----PRVIKV-IANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREI 460
KD + IK S Y + G ++ R + T I +G +
Sbjct: 126 DEYKDLIWQTKGIKTSFIRFSDGYRRRFYVNSRGSVIEQSRADINFNATAIASADGELQQ 185
Query: 461 GNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEA 520
N G R +YN T L + + A+ L A G V+L P G+ +HEA
Sbjct: 186 SNISVGSRGDYNAITR--LHSQIKDMTEHAVKLLTAPKVKGGEYTVILDPILAGVFVHEA 243
Query: 521 IGHGLEGDFNRKGSSAFSNCI-GKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTL 579
GH E D + + GK+ K + IVDN T+ + RGS DDEG L
Sbjct: 244 FGHLSEADHIYENPQMREVMVLGKKFGPKILNIVDNPTMPDLRGSYKYDDEGVAATKNYL 303
Query: 580 IENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVK 639
I G L G + A MN ++GNAR S+ + PI RM+NTY+ G EE++ VK
Sbjct: 304 IREGKLSGRLHSRETAAKMNEPLSGNARAISYRYAPIVRMSNTYIEPGTSTLEEMLDGVK 363
Query: 640 NGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGN 699
G+Y N+ GG + F FS+ +AY+I++GKI ++ L G+ + L + MIGN
Sbjct: 364 EGIYVKNWYGGTTSME--MFTFSSGEAYMIRDGKIAEALRLVVLSGNVFDTLHNIDMIGN 421
Query: 700 DMKLDPGVGVCGKDGQM-VPVGVGQPTLKIDSITVGG 735
D+ ++ G G CGK GQ +PV G P ++I VGG
Sbjct: 422 DLDMNQGGG-CGKGGQSPLPVSNGSPHIRIQKCLVGG 457
>TIGR_CMR|DET_0527 [details] [associations]
symbol:DET_0527 "TldD/PmbA family protein" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF01523 EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG0312
InterPro:IPR002510 KO:K03568 InterPro:IPR025502 PIRSF:PIRSF004919
RefSeq:YP_181271.1 STRING:Q3Z928 GeneID:3230164 KEGG:det:DET0527
PATRIC:21608121 HOGENOM:HOG000224930 OMA:RADYLEI
ProtClustDB:CLSK2767671 BioCyc:DETH243164:GJNF-527-MONOMER
Uniprot:Q3Z928
Length = 458
Score = 422 (153.6 bits), Expect = 5.8e-39, P = 5.8e-39
Identities = 130/457 (28%), Positives = 204/457 (44%)
Query: 287 MFKNKVDYADFYFQFTKNENWILEEGI-VKTGNFSINQGVGVRAISGDKTAFFYSDDISK 345
++ + DY + + + + ++I G + T S + G +RA+ F +S
Sbjct: 15 LYHYRADYLEIHLEESSG-SYISYRGQNLDTAGRSSDLGGNIRALVNGGWGF-----VSF 68
Query: 346 NTLINAVKSTRSIANQSNGXXXXXXXXXXXXXXSLYSFTDTISSINIREKIKLLERVEKI 405
N+L + K +Q+ Y+ D +S ++ ++ +RV +
Sbjct: 69 NSLDDIQKRIDQAIHQA-ALAGSAQSQFASAPSVTYAQPDELSQSSVERPLEDKKRV--L 125
Query: 406 ARLKD----PRVIKV-IANLSGEYDVILITRNDGLIVADIRPLVQLFVTIIVEKNGRREI 460
KD + IK S Y + G ++ R + T I +G +
Sbjct: 126 DEYKDLIWQTKGIKTSFIRFSDGYRRRFYVNSRGSVIEQSRADINFNATAIASADGELQQ 185
Query: 461 GNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEA 520
N G R +YN T L + + A+ L A G V+L P G+ +HEA
Sbjct: 186 SNISVGSRGDYNAITR--LHSQIKDMTEHAVKLLTAPKVKGGEYTVILDPILAGVFVHEA 243
Query: 521 IGHGLEGDFNRKGSSAFSNCI-GKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTL 579
GH E D + + GK+ K + IVDN T+ + RGS DDEG L
Sbjct: 244 FGHLSEADHIYENPQMREVMVLGKKFGPKILNIVDNPTMPDLRGSYKYDDEGVAATKNYL 303
Query: 580 IENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVK 639
I G L G + A MN ++GNAR S+ + PI RM+NTY+ G EE++ VK
Sbjct: 304 IREGKLSGRLHSRETAAKMNEPLSGNARAISYRYAPIVRMSNTYIEPGTSTLEEMLDGVK 363
Query: 640 NGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGN 699
G+Y N+ GG + F FS+ +AY+I++GKI ++ L G+ + L + MIGN
Sbjct: 364 EGIYVKNWYGGTTSME--MFTFSSGEAYMIRDGKIAEALRLVVLSGNVFDTLHNIDMIGN 421
Query: 700 DMKLDPGVGVCGKDGQM-VPVGVGQPTLKIDSITVGG 735
D+ ++ G G CGK GQ +PV G P ++I VGG
Sbjct: 422 DLDMNQGGG-CGKGGQSPLPVSNGSPHIRIQKCLVGG 457
>UNIPROTKB|P30177 [details] [associations]
symbol:ybiB "predicted transferase/phosphorylase"
species:83333 "Escherichia coli K-12" [GO:0008152 "metabolic
process" evidence=IEA] [GO:0016757 "transferase activity,
transferring glycosyl groups" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] InterPro:IPR000312
Pfam:PF02885 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0016757 EMBL:L02123 eggNOG:COG0547
Gene3D:3.40.1030.10 InterPro:IPR017459 SUPFAM:SSF47648
SUPFAM:SSF52418 PIR:H64816 RefSeq:NP_415321.1 RefSeq:YP_489073.1
ProteinModelPortal:P30177 SMR:P30177 DIP:DIP-11425N IntAct:P30177
PaxDb:P30177 PRIDE:P30177 EnsemblBacteria:EBESCT00000001383
EnsemblBacteria:EBESCT00000014655 GeneID:12930971 GeneID:945424
KEGG:ecj:Y75_p0773 KEGG:eco:b0800 PATRIC:32116803 EchoBASE:EB1540
EcoGene:EG11580 HOGENOM:HOG000264819 OMA:IGRGPHG
ProtClustDB:PRK08136 BioCyc:EcoCyc:EG11580-MONOMER
BioCyc:ECOL316407:JW0785-MONOMER Genevestigator:P30177
Uniprot:P30177
Length = 320
Score = 347 (127.2 bits), Expect = 9.0e-31, P = 9.0e-31
Identities = 88/256 (34%), Positives = 130/256 (50%)
Query: 1 MRIKGESVEEISGFLNAINSLFIPLEIPISKYAPIIIPSYNGSRRFMNVIPLLALLLSKK 60
+RIKGE E+ GF A+ + I L P K PI+IPSYNG+R+ N+ PLLA+LL K
Sbjct: 49 LRIKGEGEAEMLGFYEAMQNHTIKLTPPAGKPMPIVIPSYNGARKQANLTPLLAILLHKL 108
Query: 61 GIPVFIHGIKKNFGRITTYEILKKLGYFAVSSXXXXXXXXXXXXXVFMDISILIPELSKL 120
G PV +HG+ ++ R+ T I + +G VFM + P L K
Sbjct: 109 GFPVVVHGVSEDPTRVLTETIFELMGITPTLHGGQAQAKLDEHQPVFMPVGAFCPPLEKQ 168
Query: 121 LEIYYMLGIRNSSHLLVKIIQPLSI-PALRLVSYTHPEYLKILSDYFYNEKSLGDIFLMQ 179
L + + +G+RNS+H L K+ P + ALRL S +HPEY+ ++ +F + G LM
Sbjct: 169 LAMRWRMGVRNSAHTLAKLATPFAEGEALRLSSVSHPEYIGRVAKFFSDIG--GRALLMH 226
Query: 180 GTEGEVIPNICNSKQIIHWFHDNKYTKLTKEQNKEIS--FPKNSNINDNVLWIQSVLDNK 237
GTEGEV N QI + L ++Q+ S P+ + WI+ L
Sbjct: 227 GTEGEVYANPQRCPQI-NLIDREGMRVLYEKQDTAGSELLPQAKDPETTAQWIERCLAGS 285
Query: 238 LPIPSTIINQVKNCIL 253
PIP ++ Q+ C++
Sbjct: 286 EPIPESLKIQMACCLV 301
>UNIPROTKB|Q74BI1 [details] [associations]
symbol:GSU2060 "Zinc protease PmbA, putative"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] Pfam:PF01523 GO:GO:0006508
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0008233 KO:K03592
InterPro:IPR002510 HOGENOM:HOG000224932 RefSeq:NP_953109.1
ProteinModelPortal:Q74BI1 DNASU:2687965 GeneID:2687965
KEGG:gsu:GSU2060 PATRIC:22026979 OMA:YLYDIKR ProtClustDB:CLSK828710
BioCyc:GSUL243231:GH27-1986-MONOMER Uniprot:Q74BI1
Length = 446
Score = 302 (111.4 bits), Expect = 2.4e-24, P = 2.4e-24
Identities = 101/404 (25%), Positives = 179/404 (44%)
Query: 309 LEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGXXXX 368
++E V T S GV VR + F +S ++ L V + A
Sbjct: 36 VKEQKVDTFKCSAPLGVSVRVLKNGGMGFSFSTSMAPEDLARMVDNALVGAESQTPDADH 95
Query: 369 XXXXXXXXXXSLYS-FTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDV- 426
+ F D ++++ KI + +E++ DPRV KV G+ V
Sbjct: 96 GFPDPPAVYPDVPGLFDDGLAAVAEEAKIAVALDLERLTLAADPRVRKVRKATYGDSMVE 155
Query: 427 ILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNY-FTDMILEKCVSN 485
++ + G+ V VT + E+NG+ ++G ++++ F + +E+ V+
Sbjct: 156 TMVVNSRGVSCRYRGTSVSASVTAVAEENGQSQMGWD-----FDFSSRFDGISVERIVAG 210
Query: 486 SVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRI 545
+V A L A P VL + + E + + +KG S + G+ I
Sbjct: 211 AVAKATGLLGAATVPTMRCPAVLDT-YVATEILEVLAPAFLAESVQKGKSLLAGKRGEMI 269
Query: 546 ASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGN 605
+ +TI D+GTL G+ D EG P + T L++NG L Y+ D + AR ++ TGN
Sbjct: 270 VAPLLTIRDDGTLPGGMGTAPFDAEGVPKRNTVLVQNGRLDSYLYDTLRARKEGVAPTGN 329
Query: 606 ARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDIT-NGKFVFSAS 664
A R P ++N ++ NG PE +++ + G+ T G T +G F A+
Sbjct: 330 AIRSGIKSPPHMGVSNLFIENGTEAPEALLAGITRGVLLTEVMGMHTANTISGDFSVGAA 389
Query: 665 KAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVG 708
+++++G++T PVKG + G+ + + V +GND++ VG
Sbjct: 390 -GFLVEDGRVTRPVKGIAIAGNILELFRGVEAVGNDLRFYGTVG 432
Score = 258 (95.9 bits), Expect = 3.5e-19, P = 3.5e-19
Identities = 77/279 (27%), Positives = 133/279 (47%)
Query: 459 EIGNSGCGGRYNYNY-FTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILL 517
E G S G ++++ F + +E+ V+ +V A L A P VL + +
Sbjct: 183 ENGQSQMGWDFDFSSRFDGISVERIVAGAVAKATGLLGAATVPTMRCPAVLDT-YVATEI 241
Query: 518 HEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCT 577
E + + +KG S + G+ I + +TI D+GTL G+ D EG P + T
Sbjct: 242 LEVLAPAFLAESVQKGKSLLAGKRGEMIVAPLLTIRDDGTLPGGMGTAPFDAEGVPKRNT 301
Query: 578 TLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISS 637
L++NG L Y+ D + AR ++ TGNA R P ++N ++ NG PE +++
Sbjct: 302 VLVQNGRLDSYLYDTLRARKEGVAPTGNAIRSGIKSPPHMGVSNLFIENGTEAPEALLAG 361
Query: 638 VKNGLYATNFSGGQVDIT-NGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSM 696
+ G+ T G T +G F A+ +++++G++T PVKG + G+ + + V
Sbjct: 362 ITRGVLLTEVMGMHTANTISGDFSVGAA-GFLVEDGRVTRPVKGIAIAGNILELFRGVEA 420
Query: 697 IGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
+GND++ G VG P+L+I ++ V G
Sbjct: 421 VGNDLRF---YGT-----------VGSPSLRIAALDVSG 445
>TIGR_CMR|GSU_2060 [details] [associations]
symbol:GSU_2060 "pmbA protein, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0030152 "bacteriocin biosynthetic process"
evidence=ISS] Pfam:PF01523 GO:GO:0006508 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0008233 KO:K03592
InterPro:IPR002510 HOGENOM:HOG000224932 RefSeq:NP_953109.1
ProteinModelPortal:Q74BI1 DNASU:2687965 GeneID:2687965
KEGG:gsu:GSU2060 PATRIC:22026979 OMA:YLYDIKR ProtClustDB:CLSK828710
BioCyc:GSUL243231:GH27-1986-MONOMER Uniprot:Q74BI1
Length = 446
Score = 302 (111.4 bits), Expect = 2.4e-24, P = 2.4e-24
Identities = 101/404 (25%), Positives = 179/404 (44%)
Query: 309 LEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGXXXX 368
++E V T S GV VR + F +S ++ L V + A
Sbjct: 36 VKEQKVDTFKCSAPLGVSVRVLKNGGMGFSFSTSMAPEDLARMVDNALVGAESQTPDADH 95
Query: 369 XXXXXXXXXXSLYS-FTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSGEYDV- 426
+ F D ++++ KI + +E++ DPRV KV G+ V
Sbjct: 96 GFPDPPAVYPDVPGLFDDGLAAVAEEAKIAVALDLERLTLAADPRVRKVRKATYGDSMVE 155
Query: 427 ILITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNY-FTDMILEKCVSN 485
++ + G+ V VT + E+NG+ ++G ++++ F + +E+ V+
Sbjct: 156 TMVVNSRGVSCRYRGTSVSASVTAVAEENGQSQMGWD-----FDFSSRFDGISVERIVAG 210
Query: 486 SVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRI 545
+V A L A P VL + + E + + +KG S + G+ I
Sbjct: 211 AVAKATGLLGAATVPTMRCPAVLDT-YVATEILEVLAPAFLAESVQKGKSLLAGKRGEMI 269
Query: 546 ASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGN 605
+ +TI D+GTL G+ D EG P + T L++NG L Y+ D + AR ++ TGN
Sbjct: 270 VAPLLTIRDDGTLPGGMGTAPFDAEGVPKRNTVLVQNGRLDSYLYDTLRARKEGVAPTGN 329
Query: 606 ARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDIT-NGKFVFSAS 664
A R P ++N ++ NG PE +++ + G+ T G T +G F A+
Sbjct: 330 AIRSGIKSPPHMGVSNLFIENGTEAPEALLAGITRGVLLTEVMGMHTANTISGDFSVGAA 389
Query: 665 KAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVG 708
+++++G++T PVKG + G+ + + V +GND++ VG
Sbjct: 390 -GFLVEDGRVTRPVKGIAIAGNILELFRGVEAVGNDLRFYGTVG 432
Score = 258 (95.9 bits), Expect = 3.5e-19, P = 3.5e-19
Identities = 77/279 (27%), Positives = 133/279 (47%)
Query: 459 EIGNSGCGGRYNYNY-FTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILL 517
E G S G ++++ F + +E+ V+ +V A L A P VL + +
Sbjct: 183 ENGQSQMGWDFDFSSRFDGISVERIVAGAVAKATGLLGAATVPTMRCPAVLDT-YVATEI 241
Query: 518 HEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCT 577
E + + +KG S + G+ I + +TI D+GTL G+ D EG P + T
Sbjct: 242 LEVLAPAFLAESVQKGKSLLAGKRGEMIVAPLLTIRDDGTLPGGMGTAPFDAEGVPKRNT 301
Query: 578 TLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISS 637
L++NG L Y+ D + AR ++ TGNA R P ++N ++ NG PE +++
Sbjct: 302 VLVQNGRLDSYLYDTLRARKEGVAPTGNAIRSGIKSPPHMGVSNLFIENGTEAPEALLAG 361
Query: 638 VKNGLYATNFSGGQVDIT-NGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSM 696
+ G+ T G T +G F A+ +++++G++T PVKG + G+ + + V
Sbjct: 362 ITRGVLLTEVMGMHTANTISGDFSVGAA-GFLVEDGRVTRPVKGIAIAGNILELFRGVEA 420
Query: 697 IGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
+GND++ G VG P+L+I ++ V G
Sbjct: 421 VGNDLRF---YGT-----------VGSPSLRIAALDVSG 445
>TIGR_CMR|CHY_0656 [details] [associations]
symbol:CHY_0656 "putative pmbA protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0017000 "antibiotic biosynthetic
process" evidence=ISS] Pfam:PF01523 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0312 KO:K03592
InterPro:IPR002510 OMA:VYNKFSK RefSeq:YP_359511.1
ProteinModelPortal:Q3AEC3 STRING:Q3AEC3 GeneID:3726263
KEGG:chy:CHY_0656 PATRIC:21274449 HOGENOM:HOG000224932
BioCyc:CHYD246194:GJCN-656-MONOMER Uniprot:Q3AEC3
Length = 453
Score = 290 (107.1 bits), Expect = 7.7e-23, P = 7.7e-23
Identities = 109/465 (23%), Positives = 197/465 (42%)
Query: 279 ILLKILG-NMFKNKVDYADFYFQFTKNENWILE--EGIVKTGNFSINQGVGVRAISGDKT 335
IL++IL + + K AD +T+ E +E EG V+T ++ +GVGVR +
Sbjct: 12 ILVEILELALAEIKAKKADGEVCYTRGEELSVEVREGRVETVKQAVEEGVGVRVFYEGRL 71
Query: 336 AFFYSDDISKNTLINAVKSTRSIANQSNGXXXXXXXXXXXXXXSLYSFTDT-ISSINIRE 394
F Y+ ++ + V+ A ++ TD I++ ++ E
Sbjct: 72 GFAYTTVMTPEKIKETVEKAVQAAKITDSDPYLRLAKPSTYPTP--ELTDPEITTASLEE 129
Query: 395 KIKLLERVEKIARLKDPRVIKVIANLSGEYDVIL-ITRNDGLIVADIRPLVQLFVTIIVE 453
K+ L +E+ A P++ + +Y + +G + +++ + E
Sbjct: 130 KVNLALTMEREALNFSPKIKGIETAAYDDYHYQWHLANTEGFFGSFSGNYASIYIYLASE 189
Query: 454 KNGRREIGNSGCGGRYNYNYFTDMILEKCVSN-SVNSALINLEAKPAPAGIMKVVLGPGW 512
E S Y I K V + A+ L A P+G +L P +
Sbjct: 190 DESGSETAFS-----YKVTRKFKEIDPKAVGREAAEKAVAKLGAGKVPSGRYMALLDP-Y 243
Query: 513 PGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGN 572
+ L + + +KG S +G+++ S +++D+GTL + + D EG
Sbjct: 244 VAVNLLGVLKASFLAENVQKGKSLLKGKLGEKVFSPVFSLIDDGTLKDGLATAPFDGEGV 303
Query: 573 PTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPE 632
PT+ T L+ENG +K ++ ++ A TGNA R SF +P TN Y+ G E
Sbjct: 304 PTRKTVLVENGTVKSFLYNLYTAAKEGAVSTGNAVRSSFKALPELGTTNFYIPRGGVSRE 363
Query: 633 EIISSVKNGLYATNFSGGQV-DITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNIL 691
+ G+Y T G + +G F A+ ++++NG+I PV+G T+ G+ ++
Sbjct: 364 SLFKQTSRGVYITEVLGMHTANPVSGDFSVGAT-GFLVENGEIIRPVRGITIAGNIKDLF 422
Query: 692 KKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGGT 736
K+ +G+D++ G G PTL I+ + V G+
Sbjct: 423 GKLIAVGDDLRF---YGA-----------KGSPTLLIEEVAVSGS 453
>UNIPROTKB|Q2GGH4 [details] [associations]
symbol:pmbA "PmbA protein" species:205920 "Ehrlichia
chaffeensis str. Arkansas" [GO:0003674 "molecular_function"
evidence=ND] Pfam:PF01523 EMBL:CP000236 GenomeReviews:CP000236_GR
eggNOG:COG0312 HOGENOM:HOG000224928 KO:K03592 InterPro:IPR002510
OMA:VYNKFSK RefSeq:YP_507459.1 STRING:Q2GGH4 GeneID:3927299
KEGG:ech:ECH_0650 PATRIC:20576752 ProtClustDB:CLSK749609
BioCyc:ECHA205920:GJNR-652-MONOMER Uniprot:Q2GGH4
Length = 448
Score = 280 (103.6 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 106/392 (27%), Positives = 184/392 (46%)
Query: 320 SINQGVGVRAI-SGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGXXXXXXXXXXXXXX 378
S N +G+R I + ++ A S+++S + ++ ++A S G
Sbjct: 50 SKNCKMGIRVIVNNNQFACVSSNELSN--VSESIDQAVAMAKLSTGDPYISLYNDFINKE 107
Query: 379 SLYSFTDTI----SSINIREKIKLLERVEKIARLKDPRVIKVI-ANLS-GEYDVILITRN 432
L + D + ++I + + K++E +E A D +V+ ++ S G DV+L T N
Sbjct: 108 HLLTSNDLMILDKTNITVDQCKKIVEDMENAALSYDNQVVNSEGSSFSHGITDVVLATTN 167
Query: 433 DGLIVADIRPLVQLFVTIIVEKNGRREIG---NSGCGGRYNYNYFTDMILEKCVSNSVNS 489
G I + + +++I + + E+G +S C N + D + K +
Sbjct: 168 -GFIGSYSKSNFVSSISVIAGTDDKMEVGYDFSSVC----NLSRMKDPV--KIGKEAALR 220
Query: 490 ALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKE 549
A+ L + +V+ G LL + GD +S +N I K+I S +
Sbjct: 221 AVKRLNPGKLQTCKVPIVIENRVAGTLLKN-FASAIRGDNIANEASFLNNYINKKIFSDD 279
Query: 550 ITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRE 609
I IVD+ + + S D EG ++ENGILK ++ DI +A + + TGNA R
Sbjct: 280 IFIVDDPLMLSGLSSRPFDGEGVVGNKKLVVENGILKSWILDIRSANKLKLKTTGNAVRH 339
Query: 610 SFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYII 669
S A + P ++N Y+ NG +E+IS +K+GLY T+ G V++ G + AS + I
Sbjct: 340 SNASVS-PGVSNFYIQNGILSVQELISDIKSGLYITDLFGFGVNLITGDYSQGAS-GFFI 397
Query: 670 KNGKITYPVKGATLIGHGPNILKKVSMIGNDM 701
+NGKI+YPV T+ + ++S I ND+
Sbjct: 398 ENGKISYPVNEITIASKLQYMFSEMS-IANDL 428
Score = 144 (55.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 39/119 (32%), Positives = 61/119 (51%)
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
P ++N Y+ NG +E+IS +K+GLY T+ G V++ G + AS + I+NGKI+Y
Sbjct: 346 PGVSNFYIQNGILSVQELISDIKSGLYITDLFGFGVNLITGDYSQGAS-GFFIENGKISY 404
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PV T+ + ++S I ND+ V PT++ID IT+ G
Sbjct: 405 PVNEITIASKLQYMFSEMS-IANDLVFFSSVN--------------SPTIRIDGITIAG 448
>TIGR_CMR|ECH_0650 [details] [associations]
symbol:ECH_0650 "pmbA protein" species:205920 "Ehrlichia
chaffeensis str. Arkansas" [GO:0003674 "molecular_function"
evidence=ND] [GO:0030152 "bacteriocin biosynthetic process"
evidence=ISS] Pfam:PF01523 EMBL:CP000236 GenomeReviews:CP000236_GR
eggNOG:COG0312 HOGENOM:HOG000224928 KO:K03592 InterPro:IPR002510
OMA:VYNKFSK RefSeq:YP_507459.1 STRING:Q2GGH4 GeneID:3927299
KEGG:ech:ECH_0650 PATRIC:20576752 ProtClustDB:CLSK749609
BioCyc:ECHA205920:GJNR-652-MONOMER Uniprot:Q2GGH4
Length = 448
Score = 280 (103.6 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 106/392 (27%), Positives = 184/392 (46%)
Query: 320 SINQGVGVRAI-SGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGXXXXXXXXXXXXXX 378
S N +G+R I + ++ A S+++S + ++ ++A S G
Sbjct: 50 SKNCKMGIRVIVNNNQFACVSSNELSN--VSESIDQAVAMAKLSTGDPYISLYNDFINKE 107
Query: 379 SLYSFTDTI----SSINIREKIKLLERVEKIARLKDPRVIKVI-ANLS-GEYDVILITRN 432
L + D + ++I + + K++E +E A D +V+ ++ S G DV+L T N
Sbjct: 108 HLLTSNDLMILDKTNITVDQCKKIVEDMENAALSYDNQVVNSEGSSFSHGITDVVLATTN 167
Query: 433 DGLIVADIRPLVQLFVTIIVEKNGRREIG---NSGCGGRYNYNYFTDMILEKCVSNSVNS 489
G I + + +++I + + E+G +S C N + D + K +
Sbjct: 168 -GFIGSYSKSNFVSSISVIAGTDDKMEVGYDFSSVC----NLSRMKDPV--KIGKEAALR 220
Query: 490 ALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKE 549
A+ L + +V+ G LL + GD +S +N I K+I S +
Sbjct: 221 AVKRLNPGKLQTCKVPIVIENRVAGTLLKN-FASAIRGDNIANEASFLNNYINKKIFSDD 279
Query: 550 ITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRE 609
I IVD+ + + S D EG ++ENGILK ++ DI +A + + TGNA R
Sbjct: 280 IFIVDDPLMLSGLSSRPFDGEGVVGNKKLVVENGILKSWILDIRSANKLKLKTTGNAVRH 339
Query: 610 SFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYII 669
S A + P ++N Y+ NG +E+IS +K+GLY T+ G V++ G + AS + I
Sbjct: 340 SNASVS-PGVSNFYIQNGILSVQELISDIKSGLYITDLFGFGVNLITGDYSQGAS-GFFI 397
Query: 670 KNGKITYPVKGATLIGHGPNILKKVSMIGNDM 701
+NGKI+YPV T+ + ++S I ND+
Sbjct: 398 ENGKISYPVNEITIASKLQYMFSEMS-IANDL 428
Score = 144 (55.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 39/119 (32%), Positives = 61/119 (51%)
Query: 617 PRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITY 676
P ++N Y+ NG +E+IS +K+GLY T+ G V++ G + AS + I+NGKI+Y
Sbjct: 346 PGVSNFYIQNGILSVQELISDIKSGLYITDLFGFGVNLITGDYSQGAS-GFFIENGKISY 404
Query: 677 PVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCGKDGQMVPVGVGQPTLKIDSITVGG 735
PV T+ + ++S I ND+ V PT++ID IT+ G
Sbjct: 405 PVNEITIASKLQYMFSEMS-IANDLVFFSSVN--------------SPTIRIDGITIAG 448
>UNIPROTKB|Q2GK15 [details] [associations]
symbol:pmbA "PmbA protein" species:212042 "Anaplasma
phagocytophilum HZ" [GO:0003674 "molecular_function" evidence=ND]
Pfam:PF01523 EMBL:CP000235 GenomeReviews:CP000235_GR MEROPS:U62.001
eggNOG:COG0312 HOGENOM:HOG000224928 KO:K03592 InterPro:IPR002510
ProtClustDB:CLSK749609 RefSeq:YP_505286.1 ProteinModelPortal:Q2GK15
STRING:Q2GK15 GeneID:3931167 KEGG:aph:APH_0705 PATRIC:20950096
OMA:IAGHLFE BioCyc:APHA212042:GHPM-723-MONOMER Uniprot:Q2GK15
Length = 443
Score = 242 (90.2 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 95/399 (23%), Positives = 177/399 (44%)
Query: 309 LEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNT-LINAVKSTRSIANQSNGXXX 367
LEE I +G N VG+R I G K + S+D+ ++ L++A ++ +
Sbjct: 40 LEEMIASSG---CN--VGIRVIVGKKYSCISSNDLERSEELVDAAVKMADLSPEDPFISV 94
Query: 368 XXXXXXXXXXXS-LYSFTDTISSIN-IREKIKLLERVEKIARLKDPRVIKVI-ANLSGEY 424
S L F D+I ++ IR+ +L+ +E A D R++ A+ S
Sbjct: 95 SDQQGTYTNTASDLMIFDDSIVEMDSIRD---ILQEMEGEALSVDSRIVNSEGASFSKSL 151
Query: 425 DVILITRNDGLIVADIRPLVQLFVTIIVEKNGRR-EIGNSGCGGRYNYNYFTDMILEKCV 483
+ G + + ++++ + + E+ S + F+D+ + +
Sbjct: 152 TETALMTTRGFCGSYKKTYFSSSISVVAASDDEKMEVDYSFAVK----SKFSDLEKSRVL 207
Query: 484 SN-SVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIG 542
+ N AL L A+ M V+ LL + G +S N +G
Sbjct: 208 GREAANRALRKLNARELQTCKMPVLFENRVASSLLSN-FASAINGASIADKTSFLLNDLG 266
Query: 543 KRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSI 602
+ +I IVD+ + + S D EG + +++E G+LK ++ D+ A+ + +S
Sbjct: 267 TNVFGSDIYIVDDPLMVSGISSRPFDGEGILSTKRSIVERGVLKSWILDMRTAKQLALST 326
Query: 603 TGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFS 662
TG+A R+ A + P ++N Y+ +E++S +K GLY T+ G ++ G +
Sbjct: 327 TGHAVRKDNASVS-PGVSNFYIQRSDITVQELMSDIKRGLYITDLFGFGINFATGDYSQG 385
Query: 663 ASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDM 701
A Y+I+NG ITYPV G T+ G+ ++ + + ND+
Sbjct: 386 AF-GYMIENGDITYPVHGITIAGNLRDMFSS-AQVANDL 422
>TIGR_CMR|APH_0705 [details] [associations]
symbol:APH_0705 "pmbA protein" species:212042 "Anaplasma
phagocytophilum HZ" [GO:0003674 "molecular_function" evidence=ND]
[GO:0030152 "bacteriocin biosynthetic process" evidence=ISS]
Pfam:PF01523 EMBL:CP000235 GenomeReviews:CP000235_GR MEROPS:U62.001
eggNOG:COG0312 HOGENOM:HOG000224928 KO:K03592 InterPro:IPR002510
ProtClustDB:CLSK749609 RefSeq:YP_505286.1 ProteinModelPortal:Q2GK15
STRING:Q2GK15 GeneID:3931167 KEGG:aph:APH_0705 PATRIC:20950096
OMA:IAGHLFE BioCyc:APHA212042:GHPM-723-MONOMER Uniprot:Q2GK15
Length = 443
Score = 242 (90.2 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 95/399 (23%), Positives = 177/399 (44%)
Query: 309 LEEGIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNT-LINAVKSTRSIANQSNGXXX 367
LEE I +G N VG+R I G K + S+D+ ++ L++A ++ +
Sbjct: 40 LEEMIASSG---CN--VGIRVIVGKKYSCISSNDLERSEELVDAAVKMADLSPEDPFISV 94
Query: 368 XXXXXXXXXXXS-LYSFTDTISSIN-IREKIKLLERVEKIARLKDPRVIKVI-ANLSGEY 424
S L F D+I ++ IR+ +L+ +E A D R++ A+ S
Sbjct: 95 SDQQGTYTNTASDLMIFDDSIVEMDSIRD---ILQEMEGEALSVDSRIVNSEGASFSKSL 151
Query: 425 DVILITRNDGLIVADIRPLVQLFVTIIVEKNGRR-EIGNSGCGGRYNYNYFTDMILEKCV 483
+ G + + ++++ + + E+ S + F+D+ + +
Sbjct: 152 TETALMTTRGFCGSYKKTYFSSSISVVAASDDEKMEVDYSFAVK----SKFSDLEKSRVL 207
Query: 484 SN-SVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIG 542
+ N AL L A+ M V+ LL + G +S N +G
Sbjct: 208 GREAANRALRKLNARELQTCKMPVLFENRVASSLLSN-FASAINGASIADKTSFLLNDLG 266
Query: 543 KRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSI 602
+ +I IVD+ + + S D EG + +++E G+LK ++ D+ A+ + +S
Sbjct: 267 TNVFGSDIYIVDDPLMVSGISSRPFDGEGILSTKRSIVERGVLKSWILDMRTAKQLALST 326
Query: 603 TGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFS 662
TG+A R+ A + P ++N Y+ +E++S +K GLY T+ G ++ G +
Sbjct: 327 TGHAVRKDNASVS-PGVSNFYIQRSDITVQELMSDIKRGLYITDLFGFGINFATGDYSQG 385
Query: 663 ASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDM 701
A Y+I+NG ITYPV G T+ G+ ++ + + ND+
Sbjct: 386 AF-GYMIENGDITYPVHGITIAGNLRDMFSS-AQVANDL 422
>UNIPROTKB|Q2GDL4 [details] [associations]
symbol:pmbA "PmbA protein" species:222891 "Neorickettsia
sennetsu str. Miyayama" [GO:0003674 "molecular_function"
evidence=ND] Pfam:PF01523 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0312 KO:K03592 InterPro:IPR002510 RefSeq:YP_506432.1
ProteinModelPortal:Q2GDL4 STRING:Q2GDL4 GeneID:3932112
KEGG:nse:NSE_0549 PATRIC:22681147 HOGENOM:HOG000127251 OMA:VYNKFSK
ProtClustDB:CLSK2527724 BioCyc:NSEN222891:GHFU-568-MONOMER
Uniprot:Q2GDL4
Length = 457
Score = 229 (85.7 bits), Expect = 7.0e-16, P = 7.0e-16
Identities = 85/319 (26%), Positives = 143/319 (44%)
Query: 391 NIREKIKLLE-RVEKIARLKDPRVIKVIANLSGEYDVI--LITRNDGLIVADIRPLVQLF 447
N +K+K L E+IA +K + E +I ++ +G L
Sbjct: 130 NFPDKLKELAIETEQIAHSNGK--LKTTETIEFEKKIIKKIVANTNGFSGTFQNQLFSAV 187
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
V ++ E G G S N D+I + + + A+ L+ + P +V+
Sbjct: 188 VGVVAENEGNLNAGYS----YVTSNSLKDLIPAELAAEAEKRAIEGLKPRKIPTCKREVI 243
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR-GSIN 566
L+ L G + ++ N + K I I I++N AN + +
Sbjct: 244 FDARCASTFLNN-FSSFLSGKSVTQSATFLKNYMDKEILPSSINILNNPEGANCKIETPA 302
Query: 567 IDDEGNPT-QCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYML 625
DDEGN T +C LIE GILK ++ D NA + + G A+R I +P +TN Y+
Sbjct: 303 FDDEGNYTSKCFPLIEKGILKNWILDQYNANKLGLQSNGFAKRTLSGSI-LPLVTNIYLE 361
Query: 626 NGKFHPE-EIISSVKNGLYATN-FSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATL 683
+ + E E+IS +K GLY T+ FS G IT G + +I +NG++++PV T+
Sbjct: 362 SSDTYSEKELISRIKEGLYVTSLFSCGINPIT-GDYSQGVQGLWI-ENGQLSFPVSEITI 419
Query: 684 IGHGPNILKKVSMIGNDMK 702
G ++ K++ + N++K
Sbjct: 420 AGQLKDVFKEI-IAANNIK 437
>TIGR_CMR|NSE_0549 [details] [associations]
symbol:NSE_0549 "pmbA protein" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003674
"molecular_function" evidence=ND] [GO:0030152 "bacteriocin
biosynthetic process" evidence=ISS] Pfam:PF01523 EMBL:CP000237
GenomeReviews:CP000237_GR eggNOG:COG0312 KO:K03592
InterPro:IPR002510 RefSeq:YP_506432.1 ProteinModelPortal:Q2GDL4
STRING:Q2GDL4 GeneID:3932112 KEGG:nse:NSE_0549 PATRIC:22681147
HOGENOM:HOG000127251 OMA:VYNKFSK ProtClustDB:CLSK2527724
BioCyc:NSEN222891:GHFU-568-MONOMER Uniprot:Q2GDL4
Length = 457
Score = 229 (85.7 bits), Expect = 7.0e-16, P = 7.0e-16
Identities = 85/319 (26%), Positives = 143/319 (44%)
Query: 391 NIREKIKLLE-RVEKIARLKDPRVIKVIANLSGEYDVI--LITRNDGLIVADIRPLVQLF 447
N +K+K L E+IA +K + E +I ++ +G L
Sbjct: 130 NFPDKLKELAIETEQIAHSNGK--LKTTETIEFEKKIIKKIVANTNGFSGTFQNQLFSAV 187
Query: 448 VTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVV 507
V ++ E G G S N D+I + + + A+ L+ + P +V+
Sbjct: 188 VGVVAENEGNLNAGYS----YVTSNSLKDLIPAELAAEAEKRAIEGLKPRKIPTCKREVI 243
Query: 508 LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRR-GSIN 566
L+ L G + ++ N + K I I I++N AN + +
Sbjct: 244 FDARCASTFLNN-FSSFLSGKSVTQSATFLKNYMDKEILPSSINILNNPEGANCKIETPA 302
Query: 567 IDDEGNPT-QCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYML 625
DDEGN T +C LIE GILK ++ D NA + + G A+R I +P +TN Y+
Sbjct: 303 FDDEGNYTSKCFPLIEKGILKNWILDQYNANKLGLQSNGFAKRTLSGSI-LPLVTNIYLE 361
Query: 626 NGKFHPE-EIISSVKNGLYATN-FSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATL 683
+ + E E+IS +K GLY T+ FS G IT G + +I +NG++++PV T+
Sbjct: 362 SSDTYSEKELISRIKEGLYVTSLFSCGINPIT-GDYSQGVQGLWI-ENGQLSFPVSEITI 419
Query: 684 IGHGPNILKKVSMIGNDMK 702
G ++ K++ + N++K
Sbjct: 420 AGQLKDVFKEI-IAANNIK 437
>UNIPROTKB|Q3Z929 [details] [associations]
symbol:DET0526 "PmbA/tldD family protein" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF01523 EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG0312
KO:K03592 InterPro:IPR002510 RefSeq:YP_181270.1 STRING:Q3Z929
GeneID:3230173 KEGG:det:DET0526 PATRIC:21608119
HOGENOM:HOG000275418 OMA:TGNGFRP ProtClustDB:CLSK837443
BioCyc:DETH243164:GJNF-526-MONOMER Uniprot:Q3Z929
Length = 433
Score = 227 (85.0 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 59/201 (29%), Positives = 98/201 (48%)
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
+G M V+ P G + A+ L G ++ +S + +G+++ ++VD+ T +
Sbjct: 212 SGEMPVIFTPHGVGSTIIPALSAALNGKLVQEKASPLAGKLGEQMFDPAFSLVDDPTQSF 271
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
S DDEG +Q T ++E+G++K ++ D+ A L TGNA R P P +
Sbjct: 272 SPNSRPFDDEGTASQITPMVESGVIKNFIYDLRTAALAKAKSTGNAERHGGQ--PAPGFS 329
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGG-QVDITNGKFVFSASKAYIIKNGKITYPVK 679
+ G EE++S +K GL G Q ++ G F + Y I+NG+I VK
Sbjct: 330 ALMIKPGTVSFEEMVSGIKEGLIVEFMMGAEQGNVLGGDFSGNVLLGYKIENGQIAGRVK 389
Query: 680 GATLIGHGPNILKKVSMIGND 700
L G+ N LK ++ IG+D
Sbjct: 390 DTMLSGNIYNALKTINAIGSD 410
>TIGR_CMR|DET_0526 [details] [associations]
symbol:DET_0526 "pmbA/tldD family protein" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF01523 EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG0312
KO:K03592 InterPro:IPR002510 RefSeq:YP_181270.1 STRING:Q3Z929
GeneID:3230173 KEGG:det:DET0526 PATRIC:21608119
HOGENOM:HOG000275418 OMA:TGNGFRP ProtClustDB:CLSK837443
BioCyc:DETH243164:GJNF-526-MONOMER Uniprot:Q3Z929
Length = 433
Score = 227 (85.0 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 59/201 (29%), Positives = 98/201 (48%)
Query: 501 AGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLAN 560
+G M V+ P G + A+ L G ++ +S + +G+++ ++VD+ T +
Sbjct: 212 SGEMPVIFTPHGVGSTIIPALSAALNGKLVQEKASPLAGKLGEQMFDPAFSLVDDPTQSF 271
Query: 561 RRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMT 620
S DDEG +Q T ++E+G++K ++ D+ A L TGNA R P P +
Sbjct: 272 SPNSRPFDDEGTASQITPMVESGVIKNFIYDLRTAALAKAKSTGNAERHGGQ--PAPGFS 329
Query: 621 NTYMLNGKFHPEEIISSVKNGLYATNFSGG-QVDITNGKFVFSASKAYIIKNGKITYPVK 679
+ G EE++S +K GL G Q ++ G F + Y I+NG+I VK
Sbjct: 330 ALMIKPGTVSFEEMVSGIKEGLIVEFMMGAEQGNVLGGDFSGNVLLGYKIENGQIAGRVK 389
Query: 680 GATLIGHGPNILKKVSMIGND 700
L G+ N LK ++ IG+D
Sbjct: 390 DTMLSGNIYNALKTINAIGSD 410
>UNIPROTKB|Q5LMX0 [details] [associations]
symbol:SPO3442 "PmbA" species:246200 "Ruegeria pomeroyi
DSS-3" [GO:0003674 "molecular_function" evidence=ND] Pfam:PF01523
EMBL:CP000031 GenomeReviews:CP000031_GR MEROPS:U62.001
HOGENOM:HOG000224928 KO:K03592 OMA:GQGVNMV InterPro:IPR002510
RefSeq:YP_168638.1 ProteinModelPortal:Q5LMX0 GeneID:3195884
KEGG:sil:SPO3442 PATRIC:23380345 ProtClustDB:CLSK934166
Uniprot:Q5LMX0
Length = 468
Score = 199 (75.1 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 58/232 (25%), Positives = 109/232 (46%)
Query: 473 YFTDMILEKCVSNSVNSALINLEAKPAPA-GIMKVVLGPGWPGILLHEAIGHGLEGDFNR 531
Y +D+ + + S + L+ PA G V+ L+ + G
Sbjct: 222 YQSDLRSPEEIGRSAGERAVALQGARKPATGSYPVLFDERISASLIGHLLA-AANGASVA 280
Query: 532 KGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQD 591
+GSS + +G+++ ++++++ GS D EG PTQ ++E+G+L G+ D
Sbjct: 281 RGSSWLKDNLGEQVLPAALSLIEDPHRPRVSGSRPFDAEGLPTQARAIVEDGVLTGWTLD 340
Query: 592 IMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQ 651
+ +AR + ++ TGNA R + P P N + G +++I + GL T+ G
Sbjct: 341 LASARKLGLASTGNATR-GVSGPPSPSNWNLTLTPGTASRDDLIRDMGTGLLVTSLIGST 399
Query: 652 VDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMI-GNDMK 702
++ G + AS + ++ G+I YPV T+ G+ ++L + MI ND +
Sbjct: 400 INPNTGDYSRGAS-GFWVEKGQIAYPVNECTIAGNLRDML--LGMIPANDAR 448
>TIGR_CMR|SPO_3442 [details] [associations]
symbol:SPO_3442 "pmbA protein" species:246200 "Ruegeria
pomeroyi DSS-3" [GO:0003674 "molecular_function" evidence=ND]
[GO:0030152 "bacteriocin biosynthetic process" evidence=ISS]
Pfam:PF01523 EMBL:CP000031 GenomeReviews:CP000031_GR MEROPS:U62.001
HOGENOM:HOG000224928 KO:K03592 OMA:GQGVNMV InterPro:IPR002510
RefSeq:YP_168638.1 ProteinModelPortal:Q5LMX0 GeneID:3195884
KEGG:sil:SPO3442 PATRIC:23380345 ProtClustDB:CLSK934166
Uniprot:Q5LMX0
Length = 468
Score = 199 (75.1 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 58/232 (25%), Positives = 109/232 (46%)
Query: 473 YFTDMILEKCVSNSVNSALINLEAKPAPA-GIMKVVLGPGWPGILLHEAIGHGLEGDFNR 531
Y +D+ + + S + L+ PA G V+ L+ + G
Sbjct: 222 YQSDLRSPEEIGRSAGERAVALQGARKPATGSYPVLFDERISASLIGHLLA-AANGASVA 280
Query: 532 KGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQD 591
+GSS + +G+++ ++++++ GS D EG PTQ ++E+G+L G+ D
Sbjct: 281 RGSSWLKDNLGEQVLPAALSLIEDPHRPRVSGSRPFDAEGLPTQARAIVEDGVLTGWTLD 340
Query: 592 IMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQ 651
+ +AR + ++ TGNA R + P P N + G +++I + GL T+ G
Sbjct: 341 LASARKLGLASTGNATR-GVSGPPSPSNWNLTLTPGTASRDDLIRDMGTGLLVTSLIGST 399
Query: 652 VDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMI-GNDMK 702
++ G + AS + ++ G+I YPV T+ G+ ++L + MI ND +
Sbjct: 400 INPNTGDYSRGAS-GFWVEKGQIAYPVNECTIAGNLRDML--LGMIPANDAR 448
>UNIPROTKB|Q88AI1 [details] [associations]
symbol:PSPTO_0409 "TldD/PmbA family protein" species:223283
"Pseudomonas syringae pv. tomato str. DC3000" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF01523 EMBL:AE016853 GenomeReviews:AE016853_GR
eggNOG:COG0312 InterPro:IPR002510 HOGENOM:HOG000224931
ProtClustDB:CLSK867342 RefSeq:NP_790258.1 GeneID:1182018
KEGG:pst:PSPTO_0409 PATRIC:19992000 OMA:AECYELL
BioCyc:PSYR223283:GJIX-405-MONOMER Uniprot:Q88AI1
Length = 480
Score = 177 (67.4 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 64/289 (22%), Positives = 117/289 (40%)
Query: 458 REIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILL 517
R +G G + + L + + AL + A P G ++L P + +
Sbjct: 189 RNLGGDNFGQQGGIEVLSSCGLIGSAARVADEALQLILAPNTPTGPRDLLLMPDQMVLQI 248
Query: 518 HEAIGHGLE-----GDFNRKGSSAF--SNCIGK-RIASKEITIVDNGTLANRRGSINIDD 569
HE+IGH LE GD ++F ++ G + S + + + + + S DD
Sbjct: 249 HESIGHPLELDRILGDERNYAGTSFVKTSDFGSLQYGSSLLNVTFDPDIPEQLASYAHDD 308
Query: 570 EGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKF 629
+G P LI +G+L+ + ++ + N+R + PI RM N + G
Sbjct: 309 DGTPANKQFLIRDGLLQRPLGGALSQYRSGLDGVANSRACGWNRAPIDRMANLNIEPGDQ 368
Query: 630 HPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPN 689
+ +I ++++G+ ++ +D KF F +I+NG++ VK
Sbjct: 369 SMDGLIGTIEHGILMSSNRSWSIDDARNKFQFGCEWGQLIENGELKGVVKNPNYRAISAQ 428
Query: 690 ILKKVSMIGNDMKLDP-GVGVCGKD--GQMVPVGVGQPTLKIDSITVGG 735
K +S +G+ G CGK Q++ VG P ++ V G
Sbjct: 429 FWKNLSAVGDASTFKVLGTPNCGKGEPNQVIRVGHASPACVFANVDVFG 477
>UNIPROTKB|Q60BT2 [details] [associations]
symbol:pmbA "PmbA protein" species:243233 "Methylococcus
capsulatus str. Bath" [GO:0003674 "molecular_function" evidence=ND]
Pfam:PF01523 EMBL:AE017282 GenomeReviews:AE017282_GR MEROPS:U62.001
HOGENOM:HOG000224928 KO:K03592 OMA:GQGVNMV InterPro:IPR002510
RefSeq:YP_112914.1 ProteinModelPortal:Q60BT2 GeneID:3104599
KEGG:mca:MCA0383 PATRIC:22604511 Uniprot:Q60BT2
Length = 444
Score = 168 (64.2 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 52/177 (29%), Positives = 86/177 (48%)
Query: 527 GDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILK 586
G+ RK SS + +G+RI + + I + L GS D EG T+ L+ +G+L+
Sbjct: 261 GNLYRK-SSFLLDAVGQRIFPEFVHIHERPHLRRGLGSAPYDAEGVATRDRDLVRDGVLE 319
Query: 587 GYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATN 646
Y+ +AR + + TGNA H N + G+ + +I + GL T
Sbjct: 320 SYVLSTYSARKLGLQTTGNA---GGVH-------NLIVAPGQEDCDTLIRRMGTGLIVTE 369
Query: 647 FSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKL 703
G V+I G + A+ Y ++NG+I +PV+ T+ G+ ++ V IGND+ L
Sbjct: 370 LLGQGVNIVTGDYSRGAA-GYWVENGEIRFPVEEITIAGNLRDMFGHVVAIGNDVDL 425
Score = 52 (23.4 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 14/48 (29%), Positives = 23/48 (47%)
Query: 312 GIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIA 359
G V+T +QGVG+ G + + D+S+ L + V + IA
Sbjct: 47 GAVETIEHHRSQGVGITVYYGQRKGSASTTDLSERALTDTVGAACRIA 94
>UNIPROTKB|Q60AT9 [details] [associations]
symbol:MCA0755 "TldD/PmbA family protein" species:243233
"Methylococcus capsulatus str. Bath" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF01523 EMBL:AE017282 GenomeReviews:AE017282_GR
InterPro:IPR002510 RefSeq:YP_113258.1 ProteinModelPortal:Q60AT9
GeneID:3102340 KEGG:mca:MCA0755 PATRIC:22605296
HOGENOM:HOG000224931 OMA:PGVANFR ProtClustDB:CLSK867342
Uniprot:Q60AT9
Length = 430
Score = 173 (66.0 bits), Expect = 9.5e-10, P = 9.5e-10
Identities = 72/273 (26%), Positives = 113/273 (41%)
Query: 476 DMILEKCVSNSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLE-----GDFN 530
D I +C + AL L A+ P ++L P + +HE++GH LE GD
Sbjct: 158 DCIYREC-ERAGREALELLAAEDCPGDTRDLLLAPDQMLLQIHESVGHPLELDRILGDER 216
Query: 531 RKGSSAF--SNCIGK-RIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKG 587
+F G+ + S + I + TL DD GN LI G+L
Sbjct: 217 NYAGWSFVKPEDFGRLQYGSPLMNISFDPTLPGEFACYGFDDGGNRAHREYLIRGGLLLR 276
Query: 588 YMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNF 647
+ + + + + N R + PI RM N + G +++I+SV+ G+Y +
Sbjct: 277 GLGGLESQARLGLPGVANFRSAGWNRPPIDRMANLNLEPGDSTLDDMIASVERGIYMSAN 336
Query: 648 SGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHG-P--NILKKVSMIGNDMKLD 704
+D KF F A +I++G++T V+ G P + LKKV + D
Sbjct: 337 RSWSIDDYRRKFQFGCEYARLIEDGRLTRVVRNPNYRGVTLPFWHSLKKVGSL--DTLGI 394
Query: 705 PGVGVCGKDG--QMVPVGVGQPTLKIDSITVGG 735
G CGK QM+ VG P ++ V G
Sbjct: 395 FGTPFCGKGEPHQMIRVGHASPHCLFANVEVFG 427
>UNIPROTKB|P0AFK0 [details] [associations]
symbol:pmbA "protease involved in Microcin B17 maturation
and in sensitivity to the DNA gyrase inhibitor LetD" species:83333
"Escherichia coli K-12" [GO:0006508 "proteolysis" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] Pfam:PF01523
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006508 EMBL:U14003 EMBL:X54152
EMBL:D44452 PIR:S13730 RefSeq:NP_418656.1 RefSeq:YP_492376.1
ProteinModelPortal:P0AFK0 SMR:P0AFK0 DIP:DIP-47844N IntAct:P0AFK0
MEROPS:U62.001 PaxDb:P0AFK0 PRIDE:P0AFK0
EnsemblBacteria:EBESCT00000003759 EnsemblBacteria:EBESCT00000016109
GeneID:12933254 GeneID:948750 KEGG:ecj:Y75_p4120 KEGG:eco:b4235
PATRIC:32124043 EchoBASE:EB0734 EcoGene:EG10741 eggNOG:COG0312
HOGENOM:HOG000224928 KO:K03592 OMA:GQGVNMV ProtClustDB:PRK11040
BioCyc:EcoCyc:EG10741-MONOMER BioCyc:ECOL316407:JW4194-MONOMER
Genevestigator:P0AFK0 InterPro:IPR002510 Uniprot:P0AFK0
Length = 450
Score = 171 (65.3 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 87/405 (21%), Positives = 162/405 (40%)
Query: 312 GIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSNGXXXXXXX 371
G V+ F+ + +G+ ++ S D+S + V++ IA ++
Sbjct: 53 GEVENVEFNSDGALGITVYHQNRKGSASSTDLSPQAIARTVQAALDIARYTSPDPCAGVA 112
Query: 372 XXXXXXXSLYSFTDTI--SSINIREKIKLLERVEKIARLKDPRVIKVIA-NLSGEYDVIL 428
D + ++ E I+L R E+ A D R+ + + Y V +
Sbjct: 113 DKELLAFDAPDL-DLFHPAEVSPDEAIELAARAEQAALQADKRITNTEGGSFNSHYGVKV 171
Query: 429 ITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFT-DMILEKCVSNSV 487
+ G++ L +I E+NG E + GR + T + + C ++
Sbjct: 172 FGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGRAMSDLQTPEWVGADCARRTL 231
Query: 488 NS-ALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIA 546
+ + L AP I + G G L+ G G RK S+ + +GK+I
Sbjct: 232 SRLSPRKLSTMKAPV-IFANEVATGLFGHLVGAIAG----GSVYRK-STFLLDSLGKQIL 285
Query: 547 SKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNA 606
+TI ++ L S D EG T+ +I++GIL ++ +AR + + TG+A
Sbjct: 286 PDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTSYSARKLGLKSTGHA 345
Query: 607 RRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKA 666
H N + E+++ + GL T G V G + A+
Sbjct: 346 ---GGIH-------NWRIAGQGLSFEQMLKEMGTGLVVTELMGQGVSAITGDYSRGAA-G 394
Query: 667 YIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCG 711
+ ++NG+I YPV T+ G+ ++ + + +GND++ + CG
Sbjct: 395 FWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQ-CG 438
>UNIPROTKB|Q47VH3 [details] [associations]
symbol:pmbA "PmbA protein" species:167879 "Colwellia
psychrerythraea 34H" [GO:0003674 "molecular_function" evidence=ND]
Pfam:PF01523 EMBL:CP000083 GenomeReviews:CP000083_GR MEROPS:U62.001
eggNOG:COG0312 HOGENOM:HOG000224928 KO:K03592 OMA:GQGVNMV
InterPro:IPR002510 RefSeq:YP_271199.1 ProteinModelPortal:Q47VH3
STRING:Q47VH3 GeneID:3519757 KEGG:cps:CPS_4551 PATRIC:21471925
ProtClustDB:CLSK742429 BioCyc:CPSY167879:GI48-4560-MONOMER
Uniprot:Q47VH3
Length = 453
Score = 170 (64.9 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 90/408 (22%), Positives = 168/408 (41%)
Query: 312 GIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSN-----GXX 366
G V+ F+ + G+G+ + + D+S+ L+ V + +IA ++ G
Sbjct: 54 GEVENVEFTNDGGLGITVYREGRKGSASTADLSEQALLKTVTAAVNIAKYTSVDDCSGLA 113
Query: 367 XXXXXXXXXXXXSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSG-EYD 425
LY + I+ E I+L + E+ A DPRV +N G +D
Sbjct: 114 DKSLLAMQPIDLDLYHPHE----ISTEEAIELAKECEESALAVDPRV----SNSDGASFD 165
Query: 426 VI----LITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDM---I 478
+ + G +V P + ++ ++ I + G +Y Y + +
Sbjct: 166 TFAGFKVYGNSHGQLVG--YPSTRHSLSCVM-------IASDGDDMERDYAYTVNREFSL 216
Query: 479 LEKCVSNSVNSA---LINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSS 535
LE + + ++ L L+ + P G + V+ + I G+ RK S
Sbjct: 217 LESAKNVGLQASQEVLSRLKPQTIPTGKVPVLFRSDIANTIWGHFIAAISGGNLYRKSSF 276
Query: 536 AFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNA 595
IGK + K + I + +A S D EG TQ +I G L+ Y+ +A
Sbjct: 277 LLDE-IGKDVFPKFLNISERPHIAKALASSAFDSEGVLTQDREIISQGALQTYLLTSYSA 335
Query: 596 RLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDIT 655
R + ++ TG+A H + + +G F + ++ ++ GL T G V++
Sbjct: 336 RKLGLTTTGHA---GGIH---NWLVDAQGHDGSF--DAMLKTLGTGLLVTELMGQGVNVV 387
Query: 656 NGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKL 703
NG + AS + ++NG+I YPV T+ G+ + K + +G+D+ +
Sbjct: 388 NGDYSRGAS-GFWVENGEIAYPVSEITIAGNLAQMFKGIVAVGSDVDM 434
>TIGR_CMR|CPS_4551 [details] [associations]
symbol:CPS_4551 "pmbA protein" species:167879 "Colwellia
psychrerythraea 34H" [GO:0003674 "molecular_function" evidence=ND]
[GO:0030651 "peptide antibiotic biosynthetic process" evidence=ISS]
Pfam:PF01523 EMBL:CP000083 GenomeReviews:CP000083_GR MEROPS:U62.001
eggNOG:COG0312 HOGENOM:HOG000224928 KO:K03592 OMA:GQGVNMV
InterPro:IPR002510 RefSeq:YP_271199.1 ProteinModelPortal:Q47VH3
STRING:Q47VH3 GeneID:3519757 KEGG:cps:CPS_4551 PATRIC:21471925
ProtClustDB:CLSK742429 BioCyc:CPSY167879:GI48-4560-MONOMER
Uniprot:Q47VH3
Length = 453
Score = 170 (64.9 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 90/408 (22%), Positives = 168/408 (41%)
Query: 312 GIVKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSN-----GXX 366
G V+ F+ + G+G+ + + D+S+ L+ V + +IA ++ G
Sbjct: 54 GEVENVEFTNDGGLGITVYREGRKGSASTADLSEQALLKTVTAAVNIAKYTSVDDCSGLA 113
Query: 367 XXXXXXXXXXXXSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVIANLSG-EYD 425
LY + I+ E I+L + E+ A DPRV +N G +D
Sbjct: 114 DKSLLAMQPIDLDLYHPHE----ISTEEAIELAKECEESALAVDPRV----SNSDGASFD 165
Query: 426 VI----LITRNDGLIVADIRPLVQLFVTIIVEKNGRREIGNSGCGGRYNYNYFTDM---I 478
+ + G +V P + ++ ++ I + G +Y Y + +
Sbjct: 166 TFAGFKVYGNSHGQLVG--YPSTRHSLSCVM-------IASDGDDMERDYAYTVNREFSL 216
Query: 479 LEKCVSNSVNSA---LINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSS 535
LE + + ++ L L+ + P G + V+ + I G+ RK S
Sbjct: 217 LESAKNVGLQASQEVLSRLKPQTIPTGKVPVLFRSDIANTIWGHFIAAISGGNLYRKSSF 276
Query: 536 AFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNA 595
IGK + K + I + +A S D EG TQ +I G L+ Y+ +A
Sbjct: 277 LLDE-IGKDVFPKFLNISERPHIAKALASSAFDSEGVLTQDREIISQGALQTYLLTSYSA 335
Query: 596 RLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDIT 655
R + ++ TG+A H + + +G F + ++ ++ GL T G V++
Sbjct: 336 RKLGLTTTGHA---GGIH---NWLVDAQGHDGSF--DAMLKTLGTGLLVTELMGQGVNVV 387
Query: 656 NGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKL 703
NG + AS + ++NG+I YPV T+ G+ + K + +G+D+ +
Sbjct: 388 NGDYSRGAS-GFWVENGEIAYPVSEITIAGNLAQMFKGIVAVGSDVDM 434
>TIGR_CMR|CBU_0741 [details] [associations]
symbol:CBU_0741 "PmbA protein" species:227377 "Coxiella
burnetii RSA 493" [GO:0030152 "bacteriocin biosynthetic process"
evidence=ISS] Pfam:PF01523 EMBL:AE016828 GenomeReviews:AE016828_GR
MEROPS:U62.001 HOGENOM:HOG000224928 KO:K03592 OMA:GQGVNMV
InterPro:IPR002510 RefSeq:NP_819767.1 ProteinModelPortal:Q83DI9
GeneID:1208632 KEGG:cbu:CBU_0741 PATRIC:17930173
ProtClustDB:CLSK914278 BioCyc:CBUR227377:GJ7S-738-MONOMER
Uniprot:Q83DI9
Length = 440
Score = 170 (64.9 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 46/174 (26%), Positives = 87/174 (50%)
Query: 532 KGSSAFSNCIGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQD 591
+G+S N + ++I + ++I + L GS D+ G T+ +ENG+L Y+
Sbjct: 261 RGTSFLQNQLHQQIFPEFVSIYQDPHLPGEIGSTPFDESGVKTRKINFVENGVLTHYVLG 320
Query: 592 IMNARLMNMSITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQ 651
+A+ + M TGN+ + N ++ G + ++ ++ GL T G
Sbjct: 321 TYSAKKLAMETTGNSGG----------VYNLFITTGDKNLTGLLKEMQCGLLVTELMGQG 370
Query: 652 VDITNGKFVFSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDP 705
V++ G + A + I+NG+I YPV+ T+ G+ ++ K++ +IGND +DP
Sbjct: 371 VNLITGNYSRGAF-GFWIENGEIQYPVEEITIAGNLKDMFKQIQLIGND--IDP 421
Score = 43 (20.2 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 389 SINIREKIKLLERVEKIARLKDPRVIKVI-ANLSGEYDVILITRN 432
+I ++ I L E +AR DPR+ + ANLS Y + I N
Sbjct: 121 NITPKQAISLAIECETLARNHDPRIKQSEGANLS-TYRIFNIYGN 164
>UNIPROTKB|Q8EA31 [details] [associations]
symbol:tldE "Microcin-processing peptidase TldE"
species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] Pfam:PF01523 EMBL:AE014299
GenomeReviews:AE014299_GR MEROPS:U62.001 HOGENOM:HOG000224928
KO:K03592 OMA:GQGVNMV InterPro:IPR002510 RefSeq:NP_719608.1
ProteinModelPortal:Q8EA31 GeneID:1171696 KEGG:son:SO_4078
PATRIC:23527806 ProtClustDB:CLSK907482 Uniprot:Q8EA31
Length = 447
Score = 166 (63.5 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 91/409 (22%), Positives = 163/409 (39%)
Query: 314 VKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSN-----GXXXX 368
V+T F+ + +G+ + D+S + AVK+ IA ++ G
Sbjct: 51 VETVEFNKDGALGITVYRDGCKGSSSTSDLSPEAIALAVKAADDIARYTSADPFSGLADK 110
Query: 369 XXXXXXXXXXSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVI-ANLSGEYDVI 427
LY + IS+ E +L R E A DPR+ A+ + V
Sbjct: 111 ALMATEIRDLKLY-YPQEISA---DELAQLAIRAETAALDADPRINNSDGASANAHTSVK 166
Query: 428 LITRNDGLIVADIRPLVQLFVTIIVE-KNGRREIGNSGCGGRYNYNY---FTDMILEKCV 483
+ + G + L ++I E +NG + Y+Y F +M+ + V
Sbjct: 167 VYGNSHGFLNGYCSSRYSLSCSVIGEDRNGNMQRD-------YDYTIARKFNEMLSPESV 219
Query: 484 S-NSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIG 542
+ + L A+ + ++L P L+ IG G RK SS + I
Sbjct: 220 GLKTAEKTVSRLGARKIATTRLPILLAPEIATGLIGHLIGAISGGSLYRK-SSFLLDAIH 278
Query: 543 KRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSI 602
+I +I + L S N D EG TQ +I+ G+L+ Y+ +AR +++
Sbjct: 279 TQIFPDWFSIEEQPHLLGALASANYDSEGVATQDRRIIDRGMLETYLLTSYSARKLSLPN 338
Query: 603 TGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFS 662
TG+A I T + G F +E++ + GL T G V++ G +
Sbjct: 339 TGHAGG-------IYNWTLAHTGQG-F--DELVKGMGTGLIVTEVMGQGVNMVTGDYSRG 388
Query: 663 ASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCG 711
A+ Y+ +NG++ +PV+ T+ G+ ++ + + + D L + G
Sbjct: 389 AAGFYV-ENGEVQFPVEEITIAGNLKDMFRGIQAVSKDFDLRSSIRTGG 436
>TIGR_CMR|SO_4078 [details] [associations]
symbol:SO_4078 "pmba protein" species:211586 "Shewanella
oneidensis MR-1" [GO:0003674 "molecular_function" evidence=ND]
[GO:0030152 "bacteriocin biosynthetic process" evidence=ISS]
Pfam:PF01523 EMBL:AE014299 GenomeReviews:AE014299_GR MEROPS:U62.001
HOGENOM:HOG000224928 KO:K03592 OMA:GQGVNMV InterPro:IPR002510
RefSeq:NP_719608.1 ProteinModelPortal:Q8EA31 GeneID:1171696
KEGG:son:SO_4078 PATRIC:23527806 ProtClustDB:CLSK907482
Uniprot:Q8EA31
Length = 447
Score = 166 (63.5 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 91/409 (22%), Positives = 163/409 (39%)
Query: 314 VKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSN-----GXXXX 368
V+T F+ + +G+ + D+S + AVK+ IA ++ G
Sbjct: 51 VETVEFNKDGALGITVYRDGCKGSSSTSDLSPEAIALAVKAADDIARYTSADPFSGLADK 110
Query: 369 XXXXXXXXXXSLYSFTDTISSINIREKIKLLERVEKIARLKDPRVIKVI-ANLSGEYDVI 427
LY + IS+ E +L R E A DPR+ A+ + V
Sbjct: 111 ALMATEIRDLKLY-YPQEISA---DELAQLAIRAETAALDADPRINNSDGASANAHTSVK 166
Query: 428 LITRNDGLIVADIRPLVQLFVTIIVE-KNGRREIGNSGCGGRYNYNY---FTDMILEKCV 483
+ + G + L ++I E +NG + Y+Y F +M+ + V
Sbjct: 167 VYGNSHGFLNGYCSSRYSLSCSVIGEDRNGNMQRD-------YDYTIARKFNEMLSPESV 219
Query: 484 S-NSVNSALINLEAKPAPAGIMKVVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIG 542
+ + L A+ + ++L P L+ IG G RK SS + I
Sbjct: 220 GLKTAEKTVSRLGARKIATTRLPILLAPEIATGLIGHLIGAISGGSLYRK-SSFLLDAIH 278
Query: 543 KRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSI 602
+I +I + L S N D EG TQ +I+ G+L+ Y+ +AR +++
Sbjct: 279 TQIFPDWFSIEEQPHLLGALASANYDSEGVATQDRRIIDRGMLETYLLTSYSARKLSLPN 338
Query: 603 TGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFS 662
TG+A I T + G F +E++ + GL T G V++ G +
Sbjct: 339 TGHAGG-------IYNWTLAHTGQG-F--DELVKGMGTGLIVTEVMGQGVNMVTGDYSRG 388
Query: 663 ASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMKLDPGVGVCG 711
A+ Y+ +NG++ +PV+ T+ G+ ++ + + + D L + G
Sbjct: 389 AAGFYV-ENGEVQFPVEEITIAGNLKDMFRGIQAVSKDFDLRSSIRTGG 436
>UNIPROTKB|Q0C2G2 [details] [associations]
symbol:pmbA "PmbA protein" species:228405 "Hyphomonas
neptunium ATCC 15444" [GO:0003674 "molecular_function" evidence=ND]
Pfam:PF01523 EMBL:CP000158 GenomeReviews:CP000158_GR MEROPS:U62.001
eggNOG:COG0312 HOGENOM:HOG000224928 KO:K03592 OMA:GQGVNMV
InterPro:IPR002510 RefSeq:YP_760081.1 ProteinModelPortal:Q0C2G2
STRING:Q0C2G2 GeneID:4290346 KEGG:hne:HNE_1364 PATRIC:32215547
ProtClustDB:CLSK2532147 BioCyc:HNEP228405:GI69-1398-MONOMER
Uniprot:Q0C2G2
Length = 448
Score = 158 (60.7 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 59/258 (22%), Positives = 113/258 (43%)
Query: 446 LFVTIIVEKNGRREIGNSGCGGRYNYNYFTDMILEKCVSNSVNSALINLEAKPAPAGIMK 505
L ++ + EKNG+ E R+ + + E+ + + L A+
Sbjct: 179 LGLSAVAEKNGQMERDYDSWSVRFTKDRPS---AEEIGRTAGERTIARLGARKIATQKAP 235
Query: 506 VVLGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNCIGKRIASKEITIVDNGTLANRRGSI 565
V+ L+ +G + G +G S + + +++ +K I I D+ GS
Sbjct: 236 VIFDRRVSDSLIGALLG-AISGPSIARGVSFLKDRMDQQVFAKGIYITDDPFRPLGMGSR 294
Query: 566 NIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNMSITGNARRESFAHIPIPRMTNTYML 625
D EG P T LIE+G L ++ ++ +AR + + G A F P +N Y+
Sbjct: 295 VHDGEGLPVAETHLIEDGRLTTWLLNLPSARQLGLKSNGFASL-GFGDPPGVSTSNVYLR 353
Query: 626 NGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFVFSASKAYIIKNGKITYPVKGATLIG 685
GK P ++ + GL T+ G ++ G + + + I++G+I +PV T+ G
Sbjct: 354 PGKDSPGQLAKQIGKGLLVTDMFGPSINPNTGDYSVGVA-GFWIEDGEIAWPVSEVTVAG 412
Query: 686 HGPNILKKVSMIGNDMKL 703
P++ ++ + ND++L
Sbjct: 413 DLPSMFARM-VPANDLEL 429
>UNIPROTKB|Q9KP44 [details] [associations]
symbol:VC_2535 "PmbA protein" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0030152 "bacteriocin
biosynthetic process" evidence=ISS] Pfam:PF01523 EMBL:AE003852
GenomeReviews:AE003852_GR MEROPS:U62.001 KO:K03592 OMA:GQGVNMV
ProtClustDB:PRK11040 InterPro:IPR002510 GO:GO:0030152 PIR:D82066
RefSeq:NP_232163.1 ProteinModelPortal:Q9KP44 DNASU:2615198
GeneID:2615198 KEGG:vch:VC2535 PATRIC:20084095 Uniprot:Q9KP44
Length = 447
Score = 158 (60.7 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 69/282 (24%), Positives = 125/282 (44%)
Query: 424 YDVILITRNDGLIVADIRPLVQLFVTIIVE-KNGRREIGNSGCGGRYNYNYFT-DMILEK 481
Y V + + GL+ + + ++I E +NG E S R+ + +T + + +
Sbjct: 163 YGVRVYGNSHGLLASYASSRHSISCSVIGEGRNGEMERDYSYTVARHRDDLWTPESVGLQ 222
Query: 482 CVSNSVNSALINLEAKPAPAGIMKVV-LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNC 540
N+V S L + K +M + G G L+ G G+ RK S +
Sbjct: 223 AAENTV-SRLDPQKLKTGQFPVMFAADVATGLIGHLVMAISG----GNLYRKSSFLLDH- 276
Query: 541 IGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNM 600
+GK I I + + S D EG TQ +I +G+L Y+ AR MNM
Sbjct: 277 LGKTILPTWFNISERPHVMRGLASSPFDSEGVRTQDLEIITDGVLATYLLTSYAARKMNM 336
Query: 601 SITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFV 660
+ TG+A H N Y+ + + ++++ + GL T G V++ G +
Sbjct: 337 TPTGHA---GGIH-------NWYVKSTGQNYQQMLKELGTGLLVTEVMGQGVNVVTGDYS 386
Query: 661 FSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMK 702
A+ + ++NG+I YPV T+ G+ +L+++ +G+D++
Sbjct: 387 RGAA-GFWVENGEIKYPVSEITIAGNLKQMLQQIVAVGSDIE 427
Score = 37 (18.1 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 9/50 (18%), Positives = 22/50 (44%)
Query: 314 VKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSN 363
V+ F+ + +G+ G + + D+S+ + V + IA ++
Sbjct: 51 VENVEFNSDGALGITVYRGQRKGSASTSDLSEKAIRQTVLAALDIAQYTS 100
>TIGR_CMR|VC_2535 [details] [associations]
symbol:VC_2535 "pmbA protein" species:686 "Vibrio cholerae
O1 biovar El Tor" [GO:0030152 "bacteriocin biosynthetic process"
evidence=ISS] Pfam:PF01523 EMBL:AE003852 GenomeReviews:AE003852_GR
MEROPS:U62.001 KO:K03592 OMA:GQGVNMV ProtClustDB:PRK11040
InterPro:IPR002510 GO:GO:0030152 PIR:D82066 RefSeq:NP_232163.1
ProteinModelPortal:Q9KP44 DNASU:2615198 GeneID:2615198
KEGG:vch:VC2535 PATRIC:20084095 Uniprot:Q9KP44
Length = 447
Score = 158 (60.7 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 69/282 (24%), Positives = 125/282 (44%)
Query: 424 YDVILITRNDGLIVADIRPLVQLFVTIIVE-KNGRREIGNSGCGGRYNYNYFT-DMILEK 481
Y V + + GL+ + + ++I E +NG E S R+ + +T + + +
Sbjct: 163 YGVRVYGNSHGLLASYASSRHSISCSVIGEGRNGEMERDYSYTVARHRDDLWTPESVGLQ 222
Query: 482 CVSNSVNSALINLEAKPAPAGIMKVV-LGPGWPGILLHEAIGHGLEGDFNRKGSSAFSNC 540
N+V S L + K +M + G G L+ G G+ RK S +
Sbjct: 223 AAENTV-SRLDPQKLKTGQFPVMFAADVATGLIGHLVMAISG----GNLYRKSSFLLDH- 276
Query: 541 IGKRIASKEITIVDNGTLANRRGSINIDDEGNPTQCTTLIENGILKGYMQDIMNARLMNM 600
+GK I I + + S D EG TQ +I +G+L Y+ AR MNM
Sbjct: 277 LGKTILPTWFNISERPHVMRGLASSPFDSEGVRTQDLEIITDGVLATYLLTSYAARKMNM 336
Query: 601 SITGNARRESFAHIPIPRMTNTYMLNGKFHPEEIISSVKNGLYATNFSGGQVDITNGKFV 660
+ TG+A H N Y+ + + ++++ + GL T G V++ G +
Sbjct: 337 TPTGHA---GGIH-------NWYVKSTGQNYQQMLKELGTGLLVTEVMGQGVNVVTGDYS 386
Query: 661 FSASKAYIIKNGKITYPVKGATLIGHGPNILKKVSMIGNDMK 702
A+ + ++NG+I YPV T+ G+ +L+++ +G+D++
Sbjct: 387 RGAA-GFWVENGEIKYPVSEITIAGNLKQMLQQIVAVGSDIE 427
Score = 37 (18.1 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 9/50 (18%), Positives = 22/50 (44%)
Query: 314 VKTGNFSINQGVGVRAISGDKTAFFYSDDISKNTLINAVKSTRSIANQSN 363
V+ F+ + +G+ G + + D+S+ + V + IA ++
Sbjct: 51 VENVEFNSDGALGITVYRGQRKGSASTSDLSEKAIRQTVLAALDIAQYTS 100
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.139 0.401 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 737 710 0.00083 121 3 11 22 0.40 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 42
No. of states in DFA: 612 (65 KB)
Total size of DFA: 327 KB (2166 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:07
No. of threads or processors used: 24
Search cpu time: 59.25u 0.10s 59.35t Elapsed: 00:00:14
Total cpu time: 59.26u 0.10s 59.36t Elapsed: 00:00:21
Start: Thu Aug 15 13:04:03 2013 End: Thu Aug 15 13:04:24 2013