BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9406
(312 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9HZP7|ETFA_PSEAE Electron transfer flavoprotein subunit alpha OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=etfA PE=3 SV=1
Length = 309
Score = 345 bits (884), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 180/309 (58%), Positives = 231/309 (74%), Gaps = 2/309 (0%)
Query: 1 MPALVIAEHDNSYLKTSTLNTITAATLCSDEIHILIIGYNIEKVILDAKKVNNIKKILLV 60
M LVIAEH+N+ L +TLNT+ AA +IH+L+ G N+ V A KV + K+L+
Sbjct: 1 MAILVIAEHNNAALAAATLNTVAAAKAIGGDIHVLVAGQNVAAVAEAAAKVEGVSKVLVA 60
Query: 61 DSLYFSNNLPENIAAQISVIASNYSHILAPATIYGKNILPRVAALLNVMQISEITKVCNP 120
D+ +++ LPEN+A I+ + NYSH+LAPAT GKN LPRVAALL+V QISEI +V +P
Sbjct: 61 DNAAYAHQLPENVAPLIAELGKNYSHVLAPATTNGKNFLPRVAALLDVDQISEIVEVVSP 120
Query: 121 STFERPIYSGRIIATVQSTDIIKVITVRATNFISAKKEGNKAIIHIISKINYFSNTASIF 180
TF+RPIY+G IATVQS+ +KVITVR T F + EG A + +S +A F
Sbjct: 121 DTFKRPIYAGNAIATVQSSAAVKVITVRTTGFDAVAAEGGSAAVEQVSGPADAGKSA--F 178
Query: 181 ISRELIKSKRPELTSAKIVVAGGRGLGSSKNFKILEGLADKLNAAIGASRAAVDAGYISN 240
+ EL KS RPELT+AKIVV+GGRG+ + NFKIL LADKL AA+GASRAAVDAG++ N
Sbjct: 179 VGEELAKSDRPELTAAKIVVSGGRGMQNGDNFKILYALADKLGAAVGASRAAVDAGFVPN 238
Query: 241 NLQIGQTGKIVAPQLYIAIGISGAIQHLSGMKDSKIIVAINQDEDAPIFDISDYGLVGDL 300
++Q+GQTGKIVAPQLYIA+GISGAIQHL+GMKDSK+IVAIN+DE+APIF ++DYGLV DL
Sbjct: 239 DMQVGQTGKIVAPQLYIAVGISGAIQHLAGMKDSKVIVAINKDEEAPIFQVADYGLVADL 298
Query: 301 FEIIPKFIK 309
F+ +P+ K
Sbjct: 299 FDAVPELEK 307
>sp|Q54FD7|ETFA_DICDI Electron transfer flavoprotein subunit alpha, mitochondrial
OS=Dictyostelium discoideum GN=etfa PE=3 SV=1
Length = 355
Score = 317 bits (811), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 173/325 (53%), Positives = 222/325 (68%), Gaps = 18/325 (5%)
Query: 3 ALVIAEHDNSYLKTSTLNTITAAT-LCSDEIHILIIGYNIEKVILDAKKVNNIKKILLVD 61
LVIAEHDN+ L STLNTITAA+ L I +L+ G V KV+ + ++ VD
Sbjct: 29 CLVIAEHDNNQLLNSTLNTITAASKLGVTNISVLVAGSKCGPVADSVSKVSGVTNVVCVD 88
Query: 62 SLYFSNNLPENIAAQISVIASNYS-------HILAPATIYGKNILPRVAALLNVMQISEI 114
++L E I I + S+ S HI PA+ +GKN LPRVAALLNV QISEI
Sbjct: 89 HPTLEHSLAETITPIIVKLQSSSSKEGDEITHIFTPASNFGKNFLPRVAALLNVSQISEI 148
Query: 115 TKVCNPSTFERPIYSGRIIATVQSTDIIKVITVRATNFISAKKEGNKAIIHIISKINY-- 172
TKV + TF+RPIY+G IATV+STD KV TVR T F A G A ++S ++
Sbjct: 149 TKVKDAETFQRPIYAGNAIATVKSTDKCKVGTVRTTAFDKAPTSGGSA--KVVSANDWAV 206
Query: 173 ------FSNTASIFISRELIKSKRPELTSAKIVVAGGRGLGSSKNFKILEGLADKLNAAI 226
S T + S E+ KS+RPELTSA++VV+GGRG+ + +NFK+LE LAD L A+
Sbjct: 207 PLIEKAISETNIKWESSEVKKSERPELTSARVVVSGGRGMKNGENFKMLEELADTLGGAV 266
Query: 227 GASRAAVDAGYISNNLQIGQTGKIVAPQLYIAIGISGAIQHLSGMKDSKIIVAINQDEDA 286
GASRAAVD+G++SN+LQ+GQTGKIVAP+LYIA+GISGAIQHL+GMKDSK+IVAIN+D +A
Sbjct: 267 GASRAAVDSGFVSNDLQVGQTGKIVAPELYIAVGISGAIQHLAGMKDSKVIVAINKDPEA 326
Query: 287 PIFDISDYGLVGDLFEIIPKFIKYL 311
PIF ++D GLVGDLF +PK + +
Sbjct: 327 PIFQVADVGLVGDLFNEVPKLTESI 351
>sp|P53573|ETFA_BRAJA Electron transfer flavoprotein subunit alpha OS=Bradyrhizobium
japonicum (strain USDA 110) GN=etfA PE=3 SV=2
Length = 314
Score = 310 bits (795), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 163/313 (52%), Positives = 221/313 (70%), Gaps = 4/313 (1%)
Query: 1 MPALVIAEHDNSYLKTSTLNTITAATLCSDEIHILIIGYNIEKVILDAKKVNNIKKILLV 60
M L+IAEHDN+ LK +T +TAA ++ +L+ G + A K+ +KK+LL
Sbjct: 1 MTTLLIAEHDNASLKDATNKALTAAAALGADVEVLVAGEGAKAAADAAAKLAGVKKVLLA 60
Query: 61 DSLYFSNNLPENIAAQISVIASNYSHILAPATIYGKNILPRVAALLNVMQISEITKVCNP 120
D ++++L E +AA I +A +Y I+APAT KN++PRVAALL+VMQ+SEI KV P
Sbjct: 61 DGALYAHDLAEPLAALIVSLAPSYDAIVAPATSRFKNVMPRVAALLDVMQVSEIIKVVAP 120
Query: 121 STFERPIYSGRIIATVQSTDIIKVITVRATNFISAKKEGNKAIIHIISKINYFSNTASIF 180
T+ERPIY+G I TV+S D KVITVR + F +A + G+ + + + + S F
Sbjct: 121 DTYERPIYAGNAIQTVKSKDAKKVITVRTSTFAAAGEGGSAPVESVQAAAD---PGLSSF 177
Query: 181 ISRELIKSKRPELTSAKIVVAGGRGLGSSKNF-KILEGLADKLNAAIGASRAAVDAGYIS 239
+ E+ KS RPELTSAKI+V+GGR + S +NF K +E LADKL A +GASRAAVDAGY
Sbjct: 178 VGEEVAKSDRPELTSAKIIVSGGRAMQSRENFAKYIEPLADKLGAGVGASRAAVDAGYAP 237
Query: 240 NNLQIGQTGKIVAPQLYIAIGISGAIQHLSGMKDSKIIVAINQDEDAPIFDISDYGLVGD 299
N+ Q+GQTGK+VAP+LY+A+GISGAIQHL+GMKDSK+IVAIN+DEDAPIF ++DYGLV D
Sbjct: 238 NDWQVGQTGKVVAPELYVAVGISGAIQHLAGMKDSKVIVAINKDEDAPIFQVADYGLVAD 297
Query: 300 LFEIIPKFIKYLN 312
L++ +P+ L
Sbjct: 298 LYQAVPELTAELG 310
>sp|P13804|ETFA_HUMAN Electron transfer flavoprotein subunit alpha, mitochondrial OS=Homo
sapiens GN=ETFA PE=1 SV=1
Length = 333
Score = 305 bits (781), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 159/311 (51%), Positives = 211/311 (67%), Gaps = 4/311 (1%)
Query: 4 LVIAEHDNSYLKTSTLNTITAATLCSDEIHILIIGYNIEKVILDAKKVNNIKKILLVDSL 63
LVIAEH N L TLNTITAAT E+ L+ G +KV D KV I K+L+
Sbjct: 23 LVIAEHANDSLAPITLNTITAATRLGGEVSCLVAGTKCDKVAQDLCKVAGIAKVLVAQHD 82
Query: 64 YFSNNLPENIAAQISVIAS--NYSHILAPATIYGKNILPRVAALLNVMQISEITKVCNPS 121
+ LPE + I NY+HI A A+ +GKN+LPRVAA L V IS+I + +P
Sbjct: 83 VYKGLLPEELTPLILATQKQFNYTHICAGASAFGKNLLPRVAAKLEVAPISDIIAIKSPD 142
Query: 122 TFERPIYSGRIIATVQSTDIIKVITVRATNFISAKKEGNKAIIHIISKINYFSNTASIFI 181
TF R IY+G + TV+ + +KV +VR T+F +A G A S + S ++
Sbjct: 143 TFVRTIYAGNALCTVKCDEKVKVFSVRGTSFDAAATSGGSASSEKASSTSPVE--ISEWL 200
Query: 182 SRELIKSKRPELTSAKIVVAGGRGLGSSKNFKILEGLADKLNAAIGASRAAVDAGYISNN 241
++L KS RPELT AK+VV+GGRGL S +NFK+L LAD+L+AA+GASRAAVDAG++ N+
Sbjct: 201 DQKLTKSDRPELTGAKVVVSGGRGLKSGENFKLLYDLADQLHAAVGASRAAVDAGFVPND 260
Query: 242 LQIGQTGKIVAPQLYIAIGISGAIQHLSGMKDSKIIVAINQDEDAPIFDISDYGLVGDLF 301
+Q+GQTGKIVAP+LYIA+GISGAIQHL+GMKDSK IVAIN+D +APIF ++DYG+V DLF
Sbjct: 261 MQVGQTGKIVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLF 320
Query: 302 EIIPKFIKYLN 312
+++P+ + L
Sbjct: 321 KVVPEMTEILK 331
>sp|Q93615|ETFA_CAEEL Probable electron transfer flavoprotein subunit alpha,
mitochondrial OS=Caenorhabditis elegans GN=F27D4.1 PE=3
SV=2
Length = 332
Score = 303 bits (777), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 156/312 (50%), Positives = 217/312 (69%), Gaps = 8/312 (2%)
Query: 4 LVIAEHDNSYLKTSTLNTITAATLCSDEIHILIIGYNIEKVILDAKKVNNIKKILLVDSL 63
LV+AEHD + L TLN ITAA+ +E+ +L+ G N KV KVN +K++L+
Sbjct: 24 LVVAEHDETKLAPITLNAITAASKLGNEVSVLVTGANATKVAEQVAKVNGVKRVLVAQDE 83
Query: 64 YFSNNLPENIAAQISVIAS----NYSHILAPATIYGKNILPRVAALLNVMQISEITKVCN 119
NNLPE +A I +AS N++ I A ++ +G+ ++PRVAA L+V IS++T+V +
Sbjct: 84 KLKNNLPERVAPVI--LASQKQFNFTAITAGSSAFGRGVIPRVAAKLDVSSISDVTEVHS 141
Query: 120 PSTFERPIYSGRIIATVQSTDIIKVITVRATNFISAKKEGNKAIIHIISKINYFSNTASI 179
+F R +Y+G + V+ST IK++T R T+F AK+ G+ A+ + S S
Sbjct: 142 ADSFTRTLYAGNAVKKVKSTAPIKLLTFRGTSFEPAKEGGSGAVENAPSA--DIKTDLSE 199
Query: 180 FISRELIKSKRPELTSAKIVVAGGRGLGSSKNFKILEGLADKLNAAIGASRAAVDAGYIS 239
F+ +EL KS+RP+L +AK+VV+GGRGL S NFK++ LADKL A +GASRAAVDAGY+
Sbjct: 200 FLGQELSKSERPDLATAKVVVSGGRGLKSGDNFKLIYDLADKLGAGVGASRAAVDAGYVP 259
Query: 240 NNLQIGQTGKIVAPQLYIAIGISGAIQHLSGMKDSKIIVAINQDEDAPIFDISDYGLVGD 299
N++Q+GQTGKIVAP+LYIAIGISGAIQHL+GMKDSK+IVAIN+D DAPIF ++D GL D
Sbjct: 260 NDMQVGQTGKIVAPELYIAIGISGAIQHLAGMKDSKVIVAINKDPDAPIFQVADIGLKAD 319
Query: 300 LFEIIPKFIKYL 311
LF+ +P+ L
Sbjct: 320 LFKAVPELTAAL 331
>sp|Q8HXY0|ETFA_MACFA Electron transfer flavoprotein subunit alpha, mitochondrial
OS=Macaca fascicularis GN=ETFA PE=2 SV=1
Length = 333
Score = 301 bits (772), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 158/311 (50%), Positives = 211/311 (67%), Gaps = 4/311 (1%)
Query: 4 LVIAEHDNSYLKTSTLNTITAATLCSDEIHILIIGYNIEKVILDAKKVNNIKKILLVDSL 63
LVIAEH N L TLNTITAAT E+ L+ G +KV D KV I K+L+
Sbjct: 23 LVIAEHANDSLAPITLNTITAATRLGGEVSCLVAGTKCDKVAQDLCKVAGIAKVLVAQHD 82
Query: 64 YFSNNLPENIAAQISVIAS--NYSHILAPATIYGKNILPRVAALLNVMQISEITKVCNPS 121
+ L E++ I NY+HI A A+ +GKN+LPRVAA L V IS+I + +P
Sbjct: 83 AYRGLLAEDLTPLILATQKQFNYTHICAGASAFGKNLLPRVAAKLEVAPISDIIAIKSPD 142
Query: 122 TFERPIYSGRIIATVQSTDIIKVITVRATNFISAKKEGNKAIIHIISKINYFSNTASIFI 181
TF R IY+G + TV+ + +KV +VR T+F +A G A S + S ++
Sbjct: 143 TFVRTIYAGNALCTVKCDEKVKVFSVRGTSFEAAATSGGTASSEKASSTSPVE--ISEWL 200
Query: 182 SRELIKSKRPELTSAKIVVAGGRGLGSSKNFKILEGLADKLNAAIGASRAAVDAGYISNN 241
++L KS RPELT AK+VV+GGRGL S +NFK+L LAD+L+AA+GASRAAVDAG++ N+
Sbjct: 201 DQKLTKSDRPELTGAKVVVSGGRGLKSGENFKLLYDLADQLHAAVGASRAAVDAGFVPND 260
Query: 242 LQIGQTGKIVAPQLYIAIGISGAIQHLSGMKDSKIIVAINQDEDAPIFDISDYGLVGDLF 301
+Q+GQTGKIVAP+LYIA+GISGAIQHL+GMKDSK IVAIN+D +APIF ++DYG+V DLF
Sbjct: 261 MQVGQTGKIVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLF 320
Query: 302 EIIPKFIKYLN 312
+++P+ + L
Sbjct: 321 KVVPEMTEILK 331
>sp|Q5RC31|ETFA_PONAB Electron transfer flavoprotein subunit alpha, mitochondrial
OS=Pongo abelii GN=ETFA PE=2 SV=1
Length = 333
Score = 301 bits (771), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 157/311 (50%), Positives = 210/311 (67%), Gaps = 4/311 (1%)
Query: 4 LVIAEHDNSYLKTSTLNTITAATLCSDEIHILIIGYNIEKVILDAKKVNNIKKILLVDSL 63
LVIAEH + L TLNTITAAT E+ L+ G +KV D KV I K+L+
Sbjct: 23 LVIAEHADDSLAPITLNTITAATRLGGEVSCLVAGTKCDKVAQDLCKVAGIAKVLVAQHD 82
Query: 64 YFSNNLPENIAAQISVIAS--NYSHILAPATIYGKNILPRVAALLNVMQISEITKVCNPS 121
+ LPE + I NY+HI A A+ +GKN+LPRVAA L V IS+I + +P
Sbjct: 83 VYRGLLPEELTPLILATQKQFNYTHICAGASAFGKNLLPRVAAKLEVAPISDIIAIKSPD 142
Query: 122 TFERPIYSGRIIATVQSTDIIKVITVRATNFISAKKEGNKAIIHIISKINYFSNTASIFI 181
TF R IY+G + TV+ + +KV +VR T+F +A G A S + S ++
Sbjct: 143 TFVRTIYAGNALCTVKCDEKVKVFSVRGTSFEAAATSGGSASSEKASSTSPVE--ISEWL 200
Query: 182 SRELIKSKRPELTSAKIVVAGGRGLGSSKNFKILEGLADKLNAAIGASRAAVDAGYISNN 241
++L KS RPELT AK+VV+GGRGL S +NFK+L LAD+ +AA+GASRAAVDAG++ N+
Sbjct: 201 DQKLTKSDRPELTGAKVVVSGGRGLKSGENFKLLYDLADQRHAAVGASRAAVDAGFVPND 260
Query: 242 LQIGQTGKIVAPQLYIAIGISGAIQHLSGMKDSKIIVAINQDEDAPIFDISDYGLVGDLF 301
+Q+GQTGKIVAP+LYIA+GISGAIQHL+GMKDSK IVAIN+D +APIF ++DYG+V DLF
Sbjct: 261 MQVGQTGKIVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLF 320
Query: 302 EIIPKFIKYLN 312
+++P+ + L
Sbjct: 321 KVVPEMTEILK 331
>sp|Q99LC5|ETFA_MOUSE Electron transfer flavoprotein subunit alpha, mitochondrial OS=Mus
musculus GN=Etfa PE=1 SV=2
Length = 333
Score = 300 bits (769), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 155/311 (49%), Positives = 213/311 (68%), Gaps = 4/311 (1%)
Query: 4 LVIAEHDNSYLKTSTLNTITAATLCSDEIHILIIGYNIEKVILDAKKVNNIKKILLVDSL 63
LVIAEH N L TLNTITAA E+ L+ G +KV+ D KV + K+L+
Sbjct: 23 LVIAEHANDSLAPITLNTITAAGRLGGEVSCLVAGTKCDKVVQDLCKVAGVAKVLVAQHD 82
Query: 64 YFSNNLPENIAAQI--SVIASNYSHILAPATIYGKNILPRVAALLNVMQISEITKVCNPS 121
+ LPE + I + +Y+HI A A+ +GKN+LPRVAA LNV +S+I ++ +P
Sbjct: 83 AYKGLLPEELTPLILETQKQFSYTHICAGASAFGKNLLPRVAAKLNVAPVSDIIEIKSPD 142
Query: 122 TFERPIYSGRIIATVQSTDIIKVITVRATNFISAKKEGNKAIIHIISKINYFSNTASIFI 181
TF R IY+G + TV+ + +KV +VR T+F +A G A + S ++
Sbjct: 143 TFVRTIYAGNALCTVKCDEKVKVFSVRGTSFEAAATSGGSASSEKAPSSSSVG--ISEWL 200
Query: 182 SRELIKSKRPELTSAKIVVAGGRGLGSSKNFKILEGLADKLNAAIGASRAAVDAGYISNN 241
++L KS RPELT AK+VV+GGRGL S +NFK+L LAD+L+AA+GASRAAVDAG++ N+
Sbjct: 201 DQKLTKSDRPELTGAKVVVSGGRGLKSGENFKLLYDLADQLHAAVGASRAAVDAGFVPND 260
Query: 242 LQIGQTGKIVAPQLYIAIGISGAIQHLSGMKDSKIIVAINQDEDAPIFDISDYGLVGDLF 301
+Q+GQTGKIVAP+LYIA+GISGAIQHL+GMKDSK IVAIN+D +APIF ++DYG+V DLF
Sbjct: 261 MQVGQTGKIVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLF 320
Query: 302 EIIPKFIKYLN 312
+++P+ + L
Sbjct: 321 KVVPEMTEILK 331
>sp|Q2KJE4|ETFA_BOVIN Electron transfer flavoprotein subunit alpha, mitochondrial OS=Bos
taurus GN=ETFA PE=2 SV=1
Length = 333
Score = 295 bits (756), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 157/311 (50%), Positives = 212/311 (68%), Gaps = 4/311 (1%)
Query: 4 LVIAEHDNSYLKTSTLNTITAATLCSDEIHILIIGYNIEKVILDAKKVNNIKKILLVDSL 63
LVIAEH N L TLNTITAA E+ L+ G +KV D KV + K+L+
Sbjct: 23 LVIAEHANDTLAPITLNTITAAKHLGGEVSCLVAGTKCDKVAQDLCKVAGVAKVLVAQHD 82
Query: 64 YFSNNLPENIAAQISVIAS--NYSHILAPATIYGKNILPRVAALLNVMQISEITKVCNPS 121
+ LPE + I N++HI A A+ +GKN+LPR+AA L+V IS+I + +P
Sbjct: 83 AYKGLLPEELTPLILATQKQFNHTHICAGASAFGKNLLPRIAAKLDVAPISDIIAIKSPD 142
Query: 122 TFERPIYSGRIIATVQSTDIIKVITVRATNFISAKKEGNKAIIHIISKINYFSNTASIFI 181
TF R IY+G I TV+ + +KV +VR T+F +A G A S + S ++
Sbjct: 143 TFVRTIYAGNAICTVKCDEKVKVFSVRGTSFEAAAASGGSASSEKASSTSPVG--ISEWL 200
Query: 182 SRELIKSKRPELTSAKIVVAGGRGLGSSKNFKILEGLADKLNAAIGASRAAVDAGYISNN 241
++L KS RPELT AK+VV+GGRGL S +NFK+L LAD+L+AA+GASRAAVDAG+++N+
Sbjct: 201 DQKLTKSDRPELTGAKVVVSGGRGLKSGENFKLLYDLADQLHAAVGASRAAVDAGFVTND 260
Query: 242 LQIGQTGKIVAPQLYIAIGISGAIQHLSGMKDSKIIVAINQDEDAPIFDISDYGLVGDLF 301
LQ+GQTGKIVAP+LYIA+GISGAIQHL+GMKDSK IVAIN+D +APIF ++DYG+V DLF
Sbjct: 261 LQVGQTGKIVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLF 320
Query: 302 EIIPKFIKYLN 312
+++P+ + L
Sbjct: 321 KVVPEMTELLK 331
>sp|P13803|ETFA_RAT Electron transfer flavoprotein subunit alpha, mitochondrial
OS=Rattus norvegicus GN=Etfa PE=1 SV=4
Length = 333
Score = 293 bits (751), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 153/311 (49%), Positives = 211/311 (67%), Gaps = 4/311 (1%)
Query: 4 LVIAEHDNSYLKTSTLNTITAATLCSDEIHILIIGYNIEKVILDAKKVNNIKKILLVDSL 63
LVIAEH N L TLNTITAA E+ L+ G +KV+ D KV + K+L+
Sbjct: 23 LVIAEHANDSLAPITLNTITAAGRLGGEVSCLVAGTKCDKVVQDLCKVAGVAKVLVAQHD 82
Query: 64 YFSNNLPENIAAQI--SVIASNYSHILAPATIYGKNILPRVAALLNVMQISEITKVCNPS 121
+ LPE + I + +Y+HI A A+ +GKN+LPRVAA LNV +S+I ++ +P
Sbjct: 83 AYKGLLPEELTPLILETQKQFSYTHICAGASAFGKNLLPRVAAKLNVAPVSDIIEIKSPD 142
Query: 122 TFERPIYSGRIIATVQSTDIIKVITVRATNFISAKKEGNKAIIHIISKINYFSNTASIFI 181
TF R IY+G + TV+ + +KV +VR T+F + + S S ++
Sbjct: 143 TFVRTIYAGNALCTVKCDEKVKVFSVRGTSF--EAAAASGGSASSEKAPSSSSAGISEWL 200
Query: 182 SRELIKSKRPELTSAKIVVAGGRGLGSSKNFKILEGLADKLNAAIGASRAAVDAGYISNN 241
++L KS RPELT AK+VV+GGRGL S +NFK+L LAD+L+AA+GASRAAVDAG++ N+
Sbjct: 201 DQKLTKSDRPELTGAKVVVSGGRGLKSGENFKLLYDLADQLHAAVGASRAAVDAGFVPND 260
Query: 242 LQIGQTGKIVAPQLYIAIGISGAIQHLSGMKDSKIIVAINQDEDAPIFDISDYGLVGDLF 301
+Q+GQTGKIVAP+LYIA+GISGAIQHL+GMKDSK IVAIN+D +APIF ++DYG+V DLF
Sbjct: 261 MQVGQTGKIVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLF 320
Query: 302 EIIPKFIKYLN 312
+++P+ + L
Sbjct: 321 KVVPEMTEILK 331
>sp|P38974|ETFA_PARDE Electron transfer flavoprotein subunit alpha OS=Paracoccus
denitrificans GN=etfA PE=1 SV=2
Length = 308
Score = 288 bits (738), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 137/258 (53%), Positives = 189/258 (73%), Gaps = 3/258 (1%)
Query: 54 IKKILLVDSLYFSNNLPENIAAQISVIASNYSHILAPATIYGKNILPRVAALLNVMQISE 113
+ K+L+ + + + L E AA I +A +YSHI APAT KN++PRVAALL+VM +S+
Sbjct: 54 VAKVLVAEDALYGHRLAEPTAALIVGLAGDYSHIAAPATTDAKNVMPRVAALLDVMVLSD 113
Query: 114 ITKVCNPSTFERPIYSGRIIATVQSTDIIKVITVRATNFISAKKEGNKAIIHIISKINYF 173
++ + + TFERPIY+G I V+S D KV T+R +F +A + G + + +
Sbjct: 114 VSAILDADTFERPIYAGNAIQVVKSKDAKKVFTIRTASFDAAGEGGTAPVTETAAAAD-- 171
Query: 174 SNTASIFISRELIKSKRPELTSAKIVVAGGRGLGSSKNFKILEGLADKLNAAIGASRAAV 233
S +++ E+ +S RPELTSA+ VV+GGRGLGS ++F I+E LADKL AA+GASRAAV
Sbjct: 172 -PGLSSWVADEVAESDRPELTSARRVVSGGRGLGSKESFAIIEELADKLGAAVGASRAAV 230
Query: 234 DAGYISNNLQIGQTGKIVAPQLYIAIGISGAIQHLSGMKDSKIIVAINQDEDAPIFDISD 293
D+GY N+ Q+GQTGK+VAP+LY+A+GISGAIQHL+GMKDSK+IVAIN+DE+APIF I+D
Sbjct: 231 DSGYAPNDWQVGQTGKVVAPELYVAVGISGAIQHLAGMKDSKVIVAINKDEEAPIFQIAD 290
Query: 294 YGLVGDLFEIIPKFIKYL 311
YGLVGDLF ++P+ L
Sbjct: 291 YGLVGDLFSVVPELTGKL 308
>sp|Q9C6I6|ETFA_ARATH Electron transfer flavoprotein subunit alpha, mitochondrial
OS=Arabidopsis thaliana GN=ETFA PE=1 SV=1
Length = 363
Score = 277 bits (708), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 143/322 (44%), Positives = 220/322 (68%), Gaps = 14/322 (4%)
Query: 4 LVIAEHDNSYLKTSTLNTITAATLCSDEIHILII----GYNIEKVILDAKKVN-NIKKIL 58
L++AEH++ +K T++T+ AA + I ++ G ++++ A + ++ ++L
Sbjct: 38 LILAEHESGTIKPQTVSTVVAANSLGESSSISLLLAGSGSSLQEAASQAASCHPSVSEVL 97
Query: 59 LVDSLYFSNNLPENIAAQISVI--ASNYSHILAPATIYGKNILPRVAALLNVMQISEITK 116
+ DS F +L E A + + +YSHILA ++ +GKNILPRVAALL+V I+++ K
Sbjct: 98 VADSDKFEYSLAEPWAKLVDFVRQQGDYSHILASSSSFGKNILPRVAALLDVSPITDVVK 157
Query: 117 VCNPSTFERPIYSGRIIATVQSTDIIK-VITVRATNF----ISAKKEGNKAIIHIISKIN 171
+ F RPIY+G + TV+ T ++T+R+T+F I+A E KA + I N
Sbjct: 158 ILGSDQFIRPIYAGNALCTVRYTGAGPCMLTIRSTSFPVTPITANSESKKATVSQIDLSN 217
Query: 172 YFSNTAS--IFISRELIKSKRPELTSAKIVVAGGRGLGSSKNFKILEGLADKLNAAIGAS 229
+ ++ S ++ R ++RP+L SA++V+ GGR L S +NFK++E LA+KL A+GA+
Sbjct: 218 FEDDSVSKSRYVGRSTQDTERPDLGSARVVITGGRALKSVENFKMIEKLAEKLGGAVGAT 277
Query: 230 RAAVDAGYISNNLQIGQTGKIVAPQLYIAIGISGAIQHLSGMKDSKIIVAINQDEDAPIF 289
RAAVDAGY+ N+LQ+GQTGKIVAP+LY+A G+SGAIQHL+G+KDSK+IVA+N+D DAPIF
Sbjct: 278 RAAVDAGYVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGIKDSKVIVAVNKDADAPIF 337
Query: 290 DISDYGLVGDLFEIIPKFIKYL 311
++DYGLVGDLFE+IP+ ++ L
Sbjct: 338 QVADYGLVGDLFEVIPELLEKL 359
>sp|P0CN60|ETFA_CRYNJ Probable electron transfer flavoprotein subunit alpha,
mitochondrial OS=Cryptococcus neoformans var. neoformans
serotype D (strain JEC21 / ATCC MYA-565) GN=ETF1 PE=3
SV=1
Length = 346
Score = 274 bits (700), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 150/318 (47%), Positives = 214/318 (67%), Gaps = 10/318 (3%)
Query: 3 ALVIAEHDNSYLKTSTLNTITAATLCSDEIHILIIGY--NIEKVILDAKKVNNIKKILLV 60
+LV EH L ++L+ +TAA ++ H L++G IE V+ K++ ++ KI L
Sbjct: 27 SLVFLEHKAGKLNEASLSAVTAAKTLGNDTHGLLVGTKSEIENVLDRTKEIKDLSKIYLA 86
Query: 61 DSLYFSNNLPENIAAQISVIAS--NYSHILAPATIYGKNILPRVAALLNVMQISEITKV- 117
S +S++L E +A+ ++ IAS + SHI A T GKNI PR+A LL+ I++I +
Sbjct: 87 TSDTYSHSLAEPLASLLASIASAKDVSHIFAAHTAVGKNIFPRLAGLLDTSLIADIIALE 146
Query: 118 CNPSTFERPIYSGRIIATVQST--DIIKVITVRATNFISAKKEGNKAIIHIISKINYFSN 175
+ TF RPIY+G + T++S+ D +KV+TVR+T F A A + + I +
Sbjct: 147 SSGDTFTRPIYAGNAVLTIKSSPKDSVKVVTVRSTAFDKAAVANGSAAVEDVDIITV--D 204
Query: 176 TASIFISRELIKSKRPELTSAKIVVAGGRGLGSSKNFK-ILEGLADKLNAAIGASRAAVD 234
T + F+S EL S RP+L SA VV+GGR L S ++F IL+ LAD L AA+GASRAAVD
Sbjct: 205 TPTQFVSEELTVSSRPDLASAARVVSGGRALKSKESFDTILDPLADSLGAAVGASRAAVD 264
Query: 235 AGYISNNLQIGQTGKIVAPQLYIAIGISGAIQHLSGMKDSKIIVAINQDEDAPIFDISDY 294
AGY N+LQ+GQTGK+VAP+LY+AIGISGAIQHL+GMK+SK+I+AIN+D DAPIF ++D
Sbjct: 265 AGYADNSLQVGQTGKVVAPELYVAIGISGAIQHLAGMKESKMIIAINKDPDAPIFQVADV 324
Query: 295 GLVGDLFEIIPKFIKYLN 312
GLV DLFE +P+ +K ++
Sbjct: 325 GLVADLFESVPQLVKEID 342
>sp|P0CN61|ETFA_CRYNB Probable electron transfer flavoprotein subunit alpha,
mitochondrial OS=Cryptococcus neoformans var. neoformans
serotype D (strain B-3501A) GN=ETF1 PE=3 SV=1
Length = 346
Score = 274 bits (700), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 150/318 (47%), Positives = 214/318 (67%), Gaps = 10/318 (3%)
Query: 3 ALVIAEHDNSYLKTSTLNTITAATLCSDEIHILIIGY--NIEKVILDAKKVNNIKKILLV 60
+LV EH L ++L+ +TAA ++ H L++G IE V+ K++ ++ KI L
Sbjct: 27 SLVFLEHKAGKLNEASLSAVTAAKTLGNDTHGLLVGTKSEIENVLDRTKEIKDLSKIYLA 86
Query: 61 DSLYFSNNLPENIAAQISVIAS--NYSHILAPATIYGKNILPRVAALLNVMQISEITKV- 117
S +S++L E +A+ ++ IAS + SHI A T GKNI PR+A LL+ I++I +
Sbjct: 87 TSDTYSHSLAEPLASLLASIASAKDVSHIFAAHTAVGKNIFPRLAGLLDTSLIADIIALE 146
Query: 118 CNPSTFERPIYSGRIIATVQST--DIIKVITVRATNFISAKKEGNKAIIHIISKINYFSN 175
+ TF RPIY+G + T++S+ D +KV+TVR+T F A A + + I +
Sbjct: 147 SSGDTFTRPIYAGNAVLTIKSSPKDSVKVVTVRSTAFDKAAVANGSAAVEDVDIITV--D 204
Query: 176 TASIFISRELIKSKRPELTSAKIVVAGGRGLGSSKNFK-ILEGLADKLNAAIGASRAAVD 234
T + F+S EL S RP+L SA VV+GGR L S ++F IL+ LAD L AA+GASRAAVD
Sbjct: 205 TPTQFVSEELTVSSRPDLASAARVVSGGRALKSKESFDTILDPLADSLGAAVGASRAAVD 264
Query: 235 AGYISNNLQIGQTGKIVAPQLYIAIGISGAIQHLSGMKDSKIIVAINQDEDAPIFDISDY 294
AGY N+LQ+GQTGK+VAP+LY+AIGISGAIQHL+GMK+SK+I+AIN+D DAPIF ++D
Sbjct: 265 AGYADNSLQVGQTGKVVAPELYVAIGISGAIQHLAGMKESKMIIAINKDPDAPIFQVADV 324
Query: 295 GLVGDLFEIIPKFIKYLN 312
GLV DLFE +P+ +K ++
Sbjct: 325 GLVADLFESVPQLVKEID 342
>sp|P78790|ETFA_SCHPO Probable electron transfer flavoprotein subunit alpha,
mitochondrial OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPAC27D7.06 PE=2 SV=3
Length = 341
Score = 266 bits (681), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 140/312 (44%), Positives = 209/312 (66%), Gaps = 5/312 (1%)
Query: 4 LVIAEHDNSYLKTSTLNTITAATLCSDEIHILIIGYNIEKVILD-AKKVNNIKKILLVDS 62
L + EH L ++L+ + AA ++ +IG + ++ AK VN++KK++ V++
Sbjct: 31 LTLLEHQGGNLSPASLSAVEAAKRTGGDVFGFVIGKDSSQISQKVAKSVNDLKKVIYVEN 90
Query: 63 LYFSNNLPENIAAQI--SVIASNYSHILAPATIYGKNILPRVAALLNVMQISEITKVCNP 120
+ +N+P+ IA + +V + SH+ + + GK ++PR+AA+ +VMQIS+I V +
Sbjct: 91 PSYEHNIPDQIANVLFENVKKNEISHVFSAHSTVGKGVMPRLAAMFDVMQISDIIGVVSA 150
Query: 121 STFERPIYSGRIIATVQSTDIIKVITVRATNFISAKKEGNKAIIHIISKINYFSNTASIF 180
TF RP Y+G + TV + D IK++TVRA+ F +A G A ++ I+ +
Sbjct: 151 DTFVRPTYAGNVNVTVSTKDPIKIVTVRASAFDAAPSSGEGAAT-VVEGIDPKPAALQEW 209
Query: 181 ISRELIKSKRPELTSAKIVVAGGRGLGSSKNF-KILEGLADKLNAAIGASRAAVDAGYIS 239
+S +IK+ RP+L+SA+ VVAGGR L + F +IL LADKL AAIGA+R AVD+GY
Sbjct: 210 VSENIIKNARPDLSSAERVVAGGRPLKDKETFERILTPLADKLGAAIGATRVAVDSGYAD 269
Query: 240 NNLQIGQTGKIVAPQLYIAIGISGAIQHLSGMKDSKIIVAINQDEDAPIFDISDYGLVGD 299
N+LQIGQTGKI+AP+LYIA+GI GAIQHL+G+KDSK+I AIN+DE+APIF +D G+VGD
Sbjct: 270 NSLQIGQTGKIIAPKLYIAVGIDGAIQHLAGIKDSKVIAAINRDENAPIFQTADVGIVGD 329
Query: 300 LFEIIPKFIKYL 311
LFEI+P+ + L
Sbjct: 330 LFEIVPELTEKL 341
>sp|Q8J112|ETFA_CRYNV Probable electron transfer flavoprotein subunit alpha,
mitochondrial OS=Cryptococcus neoformans var. grubii
GN=ETF1 PE=3 SV=1
Length = 346
Score = 261 bits (667), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 147/319 (46%), Positives = 215/319 (67%), Gaps = 12/319 (3%)
Query: 3 ALVIAEHDNSYLKTSTLNTITAATLCSDEIHILIIGY--NIEKVILDAKKVNNIKKILLV 60
+LV+ EH L ++L+ +TAA ++ H +++G +E V+ +AKK+ ++ KI L
Sbjct: 27 SLVLLEHKAGRLNDASLSAVTAAKATGNDTHGILVGSMAEVEGVLKEAKKIKDLSKIYLA 86
Query: 61 DSLYFSNNLPENIAAQISVI--ASNYSHILAPATIYGKNILPRVAALLNVMQISEITKVC 118
S +S++L E +A ++ I + SH+ A T GKN+ PR+A +L+ +++I +
Sbjct: 87 TSDAYSHSLAEALAPLLASIVPTKDVSHVFAAHTAVGKNVFPRLAGMLDSSLVADIIAL- 145
Query: 119 NPS--TFERPIYSGRIIATVQST--DIIKVITVRATNFISAKKEGNKAIIHIISKINYFS 174
+PS TF RPIY+G + TV+S+ D +K++TVR+T F A A + + + S
Sbjct: 146 DPSRGTFTRPIYAGNAVLTVKSSPKDSVKIVTVRSTAFDKAAIADGSADVEDVEILAIES 205
Query: 175 NTASIFISRELIKSKRPELTSAKIVVAGGRGLGSSKNF-KILEGLADKLNAAIGASRAAV 233
T FIS EL S RP+L SA VV+GGR L S ++F KIL+ LAD L AA+GASRAAV
Sbjct: 206 PTQ--FISEELTVSSRPDLASAARVVSGGRALKSKESFDKILDPLADSLGAAVGASRAAV 263
Query: 234 DAGYISNNLQIGQTGKIVAPQLYIAIGISGAIQHLSGMKDSKIIVAINQDEDAPIFDISD 293
DAGY N+LQ+GQTGK+VAP+LY+A+GISGAIQHL+GMK+SK+IVAIN+D DAPIF ++D
Sbjct: 264 DAGYADNSLQVGQTGKVVAPELYVAVGISGAIQHLAGMKESKMIVAINKDPDAPIFQVAD 323
Query: 294 YGLVGDLFEIIPKFIKYLN 312
GLV DLFE +P+ ++ +
Sbjct: 324 VGLVADLFESVPQLVQEIG 342
>sp|Q5Y223|ETFA_CRYGW Probable electron transfer flavoprotein subunit alpha,
mitochondrial OS=Cryptococcus gattii serotype B (strain
WM276 / ATCC MYA-4071) GN=ETF1 PE=3 SV=1
Length = 346
Score = 260 bits (665), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 148/318 (46%), Positives = 211/318 (66%), Gaps = 10/318 (3%)
Query: 3 ALVIAEHDNSYLKTSTLNTITAATLCSDEIHILIIGY--NIEKVILDAKKVNNIKKILLV 60
+LV EH L ++L+ +TAA ++ H L++G IE + AK++ + KI L
Sbjct: 27 SLVFLEHKAGKLSEASLSAVTAAKTLGNDTHGLLVGTKSEIENALDRAKEIKGLSKIYLA 86
Query: 61 DSLYFSNNLPENIAAQISVI--ASNYSHILAPATIYGKNILPRVAALLNVMQISEITKV- 117
S +S++L E +A+ ++ I A + SH+ A T GKN+ PR+A LL+ I++I +
Sbjct: 87 RSDSYSHSLAEALASLLASIVSAKDVSHLFAAHTAVGKNVFPRLAGLLDSSLIADIIALE 146
Query: 118 CNPSTFERPIYSGRIIATVQST--DIIKVITVRATNFISAKKEGNKAIIHIISKINYFSN 175
+ TF RPIY+G + T++S+ D +K++TVR+T F A A+I + I +
Sbjct: 147 SSGDTFTRPIYAGNAVLTIKSSPKDSVKIVTVRSTAFDKAPVAAGSAVIEDVDIITV--D 204
Query: 176 TASIFISRELIKSKRPELTSAKIVVAGGRGLGSSKNFK-ILEGLADKLNAAIGASRAAVD 234
T + F+S EL S RP+L SA VV+GGR L S ++F IL LAD L AA+GASRAAVD
Sbjct: 205 TPTQFVSEELTVSSRPDLASAARVVSGGRALKSKESFDAILNPLADSLGAAVGASRAAVD 264
Query: 235 AGYISNNLQIGQTGKIVAPQLYIAIGISGAIQHLSGMKDSKIIVAINQDEDAPIFDISDY 294
AGY N+LQ+GQTGK+VAP+LY+AIGISGAIQHL+GMK+SK+I+AIN+D DAPIF ++D
Sbjct: 265 AGYADNSLQVGQTGKVVAPELYVAIGISGAIQHLAGMKESKMIIAINKDPDAPIFQVADV 324
Query: 295 GLVGDLFEIIPKFIKYLN 312
GLV DLFE +P+ +K L
Sbjct: 325 GLVADLFESVPQLVKELG 342
>sp|Q75LJ3|ETFA_ORYSJ Electron transfer flavoprotein subunit alpha, mitochondrial
OS=Oryza sativa subsp. japonica GN=ETFA PE=3 SV=1
Length = 358
Score = 251 bits (642), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 121/265 (45%), Positives = 189/265 (71%), Gaps = 7/265 (2%)
Query: 54 IKKILLVDSLYFSNNLPENIAAQISVIA--SNYSHILAPATIYGKNILPRVAALLNVMQI 111
+ ++L+ DS F++ L E A + + YSH++A +T +GKN+LPR AALL+V +
Sbjct: 90 VSEVLVADSDVFAHPLAEPWAELLRSVQHKGGYSHVIASSTSFGKNLLPRAAALLDVSPV 149
Query: 112 SEITKVCNPSTFERPIYSGRIIATVQST-DIIKVITVRATNFISAKKEGNKAIIHI---- 166
+++T + P F RPIY+G + TV+ T + ++++R+T+F + + I
Sbjct: 150 TDVTSISEPRVFVRPIYAGNALCTVRYTGEDPCMMSIRSTSFSPTEAMSEAKVAPITQVD 209
Query: 167 ISKINYFSNTASIFISRELIKSKRPELTSAKIVVAGGRGLGSSKNFKILEGLADKLNAAI 226
+S ++ S+ S +++ + ++RP+L +A +VV GGRGL S++NFK+LE LA+KL AA+
Sbjct: 210 LSFLSEGSSGKSAWVNLKSQDTERPDLANAPVVVTGGRGLKSAENFKVLEQLAEKLGAAV 269
Query: 227 GASRAAVDAGYISNNLQIGQTGKIVAPQLYIAIGISGAIQHLSGMKDSKIIVAINQDEDA 286
GA+RAAVDAG++ N LQ+GQTGKIVAP+LY+A G+SGAIQHL+GM+DSK+IVA+N+D DA
Sbjct: 270 GATRAAVDAGFVPNELQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADA 329
Query: 287 PIFDISDYGLVGDLFEIIPKFIKYL 311
PIF ++DYG+V DLFE++ + +K L
Sbjct: 330 PIFQVADYGIVADLFEVLDELLKKL 354
>sp|A2XNR6|ETFA_ORYSI Electron transfer flavoprotein subunit alpha, mitochondrial
OS=Oryza sativa subsp. indica GN=ETFA PE=3 SV=1
Length = 358
Score = 251 bits (642), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 121/265 (45%), Positives = 189/265 (71%), Gaps = 7/265 (2%)
Query: 54 IKKILLVDSLYFSNNLPENIAAQISVIA--SNYSHILAPATIYGKNILPRVAALLNVMQI 111
+ ++L+ DS F++ L E A + + YSH++A +T +GKN+LPR AALL+V +
Sbjct: 90 VSEVLVADSDVFAHPLAEPWAELLRSVQHKGGYSHVIASSTSFGKNLLPRAAALLDVSPV 149
Query: 112 SEITKVCNPSTFERPIYSGRIIATVQST-DIIKVITVRATNFISAKKEGNKAIIHI---- 166
+++T + P F RPIY+G + TV+ T + ++++R+T+F + + I
Sbjct: 150 TDVTSISEPRVFVRPIYAGNALCTVRYTGEDPCMMSIRSTSFSPTEAMSEAKVAPITQVD 209
Query: 167 ISKINYFSNTASIFISRELIKSKRPELTSAKIVVAGGRGLGSSKNFKILEGLADKLNAAI 226
+S ++ S+ S +++ + ++RP+L +A +VV GGRGL S++NFK+LE LA+KL AA+
Sbjct: 210 LSFLSEGSSGKSAWVNLKSQDTERPDLANAPVVVTGGRGLKSAENFKVLEQLAEKLGAAV 269
Query: 227 GASRAAVDAGYISNNLQIGQTGKIVAPQLYIAIGISGAIQHLSGMKDSKIIVAINQDEDA 286
GA+RAAVDAG++ N LQ+GQTGKIVAP+LY+A G+SGAIQHL+GM+DSK+IVA+N+D DA
Sbjct: 270 GATRAAVDAGFVPNELQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNKDADA 329
Query: 287 PIFDISDYGLVGDLFEIIPKFIKYL 311
PIF ++DYG+V DLFE++ + +K L
Sbjct: 330 PIFQVADYGIVADLFEVLDELLKKL 354
>sp|Q12480|ETFA_YEAST Probable electron transfer flavoprotein subunit alpha,
mitochondrial OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=AIM45 PE=1 SV=1
Length = 344
Score = 235 bits (599), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 128/290 (44%), Positives = 189/290 (65%), Gaps = 8/290 (2%)
Query: 29 SDEIHILIIGYNIEKV---ILDAKKVNNIKKILLVDSLYFSNNLPENIAAQISVI--ASN 83
S+ I +I G EK + + +N++K+++ + LPE + + + +
Sbjct: 52 SNPITAVITGSKAEKTAEALKSSYSCSNLEKLVIFEDSKLDTCLPEQLTPLLVKLLKGGD 111
Query: 84 YSHILAPATIYGKNILPRVAALLNVMQISEITKVCNPSTFERPIYSGRIIATVQSTDIIK 143
YSH + + GK++LPRV ALL+V + E+T + +P TF RPIY+G II+T++ K
Sbjct: 112 YSHFVVSNSSVGKSVLPRVGALLDVQPVCEVTVIKDPKTFIRPIYAGNIISTIECQAEKK 171
Query: 144 VITVRATNFISAKKEGNKAIIHIISKINYFSNTASI-FISRELIKSKRPELTSAKIVVAG 202
++ +RA+ F EG+ + I + + ++ ++ L KS+RPELTSA+ VV G
Sbjct: 172 LLIIRASAF-PPIAEGSMDSVTIEKRTDIPPCDLNVTWVKTILTKSERPELTSAQNVVTG 230
Query: 203 GRGLGSSKNF-KILEGLADKLNAAIGASRAAVDAGYISNNLQIGQTGKIVAPQLYIAIGI 261
GR L + F K+L LAD L+AAIGA+RA+VD G N+LQIGQTGK+VAP LYIAIG+
Sbjct: 231 GRALKDKETFEKLLSPLADVLHAAIGATRASVDNGLCDNSLQIGQTGKVVAPNLYIAIGV 290
Query: 262 SGAIQHLSGMKDSKIIVAINQDEDAPIFDISDYGLVGDLFEIIPKFIKYL 311
SGA+QHL+GMKDSK+IVAIN D DAPIF+++DYGL GDL++I+P+ + L
Sbjct: 291 SGAVQHLAGMKDSKVIVAINNDPDAPIFNVADYGLQGDLYKIVPELTEKL 340
>sp|O53275|ETFA_MYCTU Electron transfer flavoprotein subunit alpha OS=Mycobacterium
tuberculosis GN=etfA PE=3 SV=1
Length = 318
Score = 209 bits (533), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 123/315 (39%), Positives = 176/315 (55%), Gaps = 11/315 (3%)
Query: 4 LVIAEHDNSYLKTSTLNTITAATLCSDEIHILIIGYNIEKVILDAKKVNNIKKILLVDSL 63
LV+ EH LK + ITAA + +++ ++D K KI + +S
Sbjct: 5 LVLVEHAEGALKKVSAELITAARALGEPAAVVVGVPGTAAPLVDGLKAAGAAKIYVAESD 64
Query: 64 YFSNNLPENIAAQISVIA-----SNYSHILAPATIYGKNILPRVAALLNVMQISEITKVC 118
L I + V+A S + +L AT GK I R+AA + + ++ V
Sbjct: 65 LVDKYL---ITPAVDVLAGLAESSAPAGVLIAATADGKEIAGRLAARIGSGLLVDVVDVR 121
Query: 119 NPSTFERPIYSGRIIATVQSTDIIKVITVRATNFISAKKEGNKAIIHIISKINYFSNTAS 178
I+ G Q+ VITVRA + G + + ++ + A+
Sbjct: 122 EGGVGVHSIFGGAFTVEAQANGDTPVITVRAGAVEAEPAAGAGEQVSV--EVPAAAENAA 179
Query: 179 IFISRE-LIKSKRPELTSAKIVVAGGRGLGSSKNFKILEGLADKLNAAIGASRAAVDAGY 237
+RE + RPELT A IVVAGGRG+GS++NF ++E LAD L AA+GASRAAVD+GY
Sbjct: 180 RITAREPAVAGDRPELTEATIVVAGGRGVGSAENFSVVEALADSLGAAVGASRAAVDSGY 239
Query: 238 ISNNLQIGQTGKIVAPQLYIAIGISGAIQHLSGMKDSKIIVAINQDEDAPIFDISDYGLV 297
Q+GQTGK V+PQLYIA+GISGAIQH +GM+ SK IVA+N+DE+APIF+I+DYG+V
Sbjct: 240 YPGQFQVGQTGKTVSPQLYIALGISGAIQHRAGMQTSKTIVAVNKDEEAPIFEIADYGVV 299
Query: 298 GDLFEIIPKFIKYLN 312
GDLF++ P+ + +
Sbjct: 300 GDLFKVAPQLTEAIK 314
>sp|P94551|ETFA_BACSU Electron transfer flavoprotein subunit alpha OS=Bacillus subtilis
(strain 168) GN=etfA PE=3 SV=1
Length = 325
Score = 181 bits (458), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 121/312 (38%), Positives = 179/312 (57%), Gaps = 15/312 (4%)
Query: 4 LVIAEHDNSYLKTSTLNTITAA-TLCSD-EIHILIIGYNIEKVILDAKKVNNIKKILLVD 61
+V+ E + L+ T I A T+ D E+ ++IG N++ + + K + D
Sbjct: 6 IVLGEIRDGELRNVTFEAIAAGRTISGDGEVIGVLIGENVQSIAQELIHYGADKVLTAED 65
Query: 62 ---SLYFSNNLPENIAAQISVIASNYSHILAPATIYGKNILPRVAALLNVMQISEITKVC 118
Y ++ + + I N ++ T GK++ P++AA L IS+ V
Sbjct: 66 PKLKTYTADGYSQVMRGVIE--QENPDSVIFGHTAMGKDLSPKLAARLQTGLISDAIDVS 123
Query: 119 NPS---TFERPIYSGRIIATVQSTDIIKVITVRATNFISAKKEGNKAIIHIISKINYFSN 175
F RPIYSG+ V STD + T+R N +++K+ +++ I I+ S
Sbjct: 124 VTGGNVVFTRPIYSGKAFERVISTDPMIFATIRPNNIQASEKDTSRS--GSIESID-VSL 180
Query: 176 TASIFISRELIKSKRP--ELTSAKIVVAGGRGLGSSKNFKILEGLADKLNAAIGASRAAV 233
T + +E++K +L+ AKI+VAGGRG+ S + F+ L+ LA+ L AA+GASR A
Sbjct: 181 TDLRTVIQEVVKKTADGVDLSEAKIIVAGGRGVKSKEGFQPLQELAEVLGAAVGASRGAC 240
Query: 234 DAGYISNNLQIGQTGKIVAPQLYIAIGISGAIQHLSGMKDSKIIVAINQDEDAPIFDISD 293
DA Y LQIGQTGK+V P LYIA GISGAIQHL+GM +SK+IVAIN+D +A IF I+D
Sbjct: 241 DADYCDYALQIGQTGKVVTPDLYIACGISGAIQHLAGMSNSKVIVAINKDPEADIFKIAD 300
Query: 294 YGLVGDLFEIIP 305
YG+VGDLFE++P
Sbjct: 301 YGIVGDLFEVVP 312
>sp|O33096|ETFA_MYCLE Electron transfer flavoprotein subunit alpha OS=Mycobacterium
leprae (strain TN) GN=etfA PE=3 SV=1
Length = 318
Score = 181 bits (458), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 119/308 (38%), Positives = 177/308 (57%), Gaps = 5/308 (1%)
Query: 3 ALVIAEHDNSYLKTSTLNTITAATLCSDEIHILIIGYNIEKVILDAKKVNNIKKILLVDS 62
ALV+ EH LK + ITAA + + +++ ++D K KI + +S
Sbjct: 4 ALVLVEHTEGALKKVSAELITAARVLGEPAAVVVGTPGTSAPLVDGLKTAGAAKIYVAES 63
Query: 63 LYFSNNLPENIAAQISVIA--SNYSHILAPATIYGKNILPRVAALLNVMQISEITKVCNP 120
L + ++ +A S + +L AT GK I R+AA + + ++ V
Sbjct: 64 DAADKYLITPVVDVLAALAESSAPAAVLLAATADGKEIGGRLAARIGSGLLVDVVDVREG 123
Query: 121 STFERPIYSGRIIATVQSTDIIKVITVRATNFISAKKEGNKAIIHIISKINYFSNTASIF 180
+ ++ G I Q+ VITVRA + EG + + ++ + A+
Sbjct: 124 AVGVHSVFGGVFIVEAQANGDTPVITVRAGAVEAQPAEGAGEQVSV--EVPAPAENATKI 181
Query: 181 ISR-ELIKSKRPELTSAKIVVAGGRGLGSSKNFKILEGLADKLNAAIGASRAAVDAGYIS 239
+R + RP+LT A +VV+GGRG+GS+ NF ++E LAD L AA+GASRAAVD+GY
Sbjct: 182 TARAPAVVDNRPDLTEATVVVSGGRGVGSADNFSVVEALADSLGAAVGASRAAVDSGYYP 241
Query: 240 NNLQIGQTGKIVAPQLYIAIGISGAIQHLSGMKDSKIIVAINQDEDAPIFDISDYGLVGD 299
QIGQTGK V+PQLYIA+GISGAIQH +GM+ SK IVA+N+DE+APIF+I+D+G+VGD
Sbjct: 242 GQFQIGQTGKTVSPQLYIALGISGAIQHRAGMQTSKTIVAVNKDEEAPIFEIADFGVVGD 301
Query: 300 LFEIIPKF 307
LF++ P+
Sbjct: 302 LFKVAPQL 309
>sp|P53578|FIXB_CLOSA Protein FixB OS=Clostridium saccharobutylicum GN=fixB PE=3 SV=1
Length = 334
Score = 169 bits (427), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 179/319 (56%), Gaps = 18/319 (5%)
Query: 4 LVIAEHDNSYLKTSTLNTITAATLCSDEIHI----LIIGYNIEKVILDAKKVNNIKKILL 59
V AE L+ +L + +D++ + L++G N+E + A+ + ++L+
Sbjct: 10 WVFAEQREGELQKVSLELLGEGRRVADKLGVKLTALLLGSNVEGIKDLAE--HGADEVLV 67
Query: 60 VDSLYFSNNLPENIAAQISVIASNYSH--ILAPATIYGKNILPRVAALLNVMQISEIT-- 115
D+ + + I +A+ + AT G+++ PRVAA LN ++ T
Sbjct: 68 ADNKDLQHYTTDAYTKVICDLANERKPGILFVGATFIGRDLGPRVAARLNTGLTADCTSI 127
Query: 116 --KVCNPSTF-ERPIYSGRIIATVQSTD-IIKVITVRATNFISAKKEGNKAIIHIISKIN 171
+V N RP + G ++AT+ + ++ TVR F +G + + ++
Sbjct: 128 DVEVENGDLLATRPAFGGNLMATIACPEHRPQMATVRPGVFEKVNTDGANCKVEKV-EVK 186
Query: 172 YFSNTASIFISRELIKSKRP--ELTSAKIVVAGGRGLGSSKNFKILEGLADKLNAAIGAS 229
+N + E+IKSK+ +++ AKI+VAGGRG+GS +NF++L LA L + S
Sbjct: 187 LTNNDLRTKV-LEIIKSKKDIVDISEAKIIVAGGRGVGSKENFELLGELAKVLGGTVAGS 245
Query: 230 RAAVDAGYISNNLQIGQTGKIVAPQLYIAIGISGAIQHLSGMKDSKIIVAINQDEDAPIF 289
RAAV+ G+I N Q+GQTGK V P +YIA GISGAIQH++GM+DS +I+AIN+DE API
Sbjct: 246 RAAVEKGWIENAYQVGQTGKTVKPSIYIACGISGAIQHVAGMQDSDMIIAINKDETAPIM 305
Query: 290 DISDYGLVGDLFEIIPKFI 308
++DYG+VGD+ ++P+ I
Sbjct: 306 KVADYGIVGDVKNVLPELI 324
>sp|P71153|ETFA_THETC Electron transfer flavoprotein subunit alpha
OS=Thermoanaerobacterium thermosaccharolyticum (strain
ATCC 7956 / DSM 571 / NCIB 9385 / NCA 3814) GN=etfA PE=3
SV=2
Length = 330
Score = 157 bits (398), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 118/324 (36%), Positives = 178/324 (54%), Gaps = 25/324 (7%)
Query: 4 LVIAEHDNSYLKTSTLNTITAATLCSDE----IHILIIGYNIEKVILDAKKVNNIKKILL 59
+ AE N L + + A +D+ + ++IG+N+E + D + +
Sbjct: 8 WIFAEQRNGKLMNVAIEILGEARKLADKKGVNVGAVLIGHNVENLSKDLISFG-ADIVYV 66
Query: 60 VDSLYFSNNLPENIAAQISVIASNYSH--ILAPATIYGKNILPRVAALLNVMQISEITKV 117
VD+ SN E A IS +A Y IL AT G+++ PR+A+ L ++ +T
Sbjct: 67 VDNPLLSNYTTEGYAKAISELAKEYKPEVILYGATFIGRDLAPRIASRL----MTGLTAD 122
Query: 118 CNPSTFE--------RPIYSGRIIATVQSTD-IIKVITVRATNFISAKKEGNK--AIIHI 166
C + RP + G ++AT++ D ++ TVR A ++ + +I
Sbjct: 123 CTGLDIDENGLLLQTRPAFGGNLMATIKCPDKRPQMSTVRPGVMKRAIRDDTRDGKVIKF 182
Query: 167 ISKINYFS-NTASIFISRELIKSKRPELTSAKIVVAGGRGLGSSKNFKILEGLADKLNAA 225
+ IN T + I++E L A I+V+GGRG+G F I++ LAD L
Sbjct: 183 DADINESDIRTKILSIAKE--AKNVVNLEEADIIVSGGRGIGGPDGFNIIKELADVLGGV 240
Query: 226 IGASRAAVDAGYISNNLQIGQTGKIVAPQLYIAIGISGAIQHLSGMKDSKIIVAINQDED 285
+GASRA VDAG+I+++ Q+GQTGK V P+LYIA GISGAIQHL+GM +S IVAIN++ D
Sbjct: 241 VGASRATVDAGWITSDHQVGQTGKTVRPKLYIACGISGAIQHLAGMSNSGTIVAINKNPD 300
Query: 286 APIFDISDYGLVGDLFEIIPKFIK 309
APIF +DYG+VGDLF++IP I+
Sbjct: 301 APIFKFADYGIVGDLFKVIPVLIE 324
>sp|O85692|ETFA_MEGEL Electron transfer flavoprotein subunit alpha OS=Megasphaera
elsdenii GN=etfA PE=3 SV=1
Length = 338
Score = 152 bits (384), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 114/321 (35%), Positives = 168/321 (52%), Gaps = 26/321 (8%)
Query: 5 VIAEHDNSYLKTSTLNTITAATLCSD----EIHILIIGYNIEKVILDAKKVNNIKKILLV 60
VIAE L+ + + A + +D E+ ++IG ++ K + + K+ +
Sbjct: 11 VIAEQFEGKLRDVSFELLGQARILADTIGDEVGAILIGKDV-KPLAQELIAHGAHKVYVY 69
Query: 61 DSLYFSNNLPENIAAQISVIASNYSH-----ILAPATIYGKNILPRVAALLNVMQISEIT 115
D + N A VI + L AT G+++ PRVA L ++ T
Sbjct: 70 DDPQLEHY---NTTAYAKVICDFFHEEKPNVFLVGATNIGRDLGPRVANSLKTGLTADCT 126
Query: 116 KVCNPS-----TFERPIYSGRIIATVQSTD-IIKVITVRATNFISAKKEGN-KAIIHIIS 168
++ + RP G I+A + D ++ TVR F K E + A +I
Sbjct: 127 QLGVDDDKKTIVWTRPALGGNIMAEIICPDNRPQMGTVRPHVF--KKPEADPSATGEVIE 184
Query: 169 KINYFSNTASIFISRELIK--SKRPELTSAKIVVAGGRGLGSSKNFK--ILEGLADKLNA 224
K S+ + ELIK + ++ A ++VAGGRG+ S + FK IL+ AD L
Sbjct: 185 KKANLSDADFMTKFVELIKLGGEGVKIEDADVIVAGGRGMNSEEPFKTGILKECADVLGG 244
Query: 225 AIGASRAAVDAGYISNNLQIGQTGKIVAPQLYIAIGISGAIQHLSGMKDSKIIVAINQDE 284
A+GASRAAVDAG+I Q+GQTGK V P++YIA ISGAIQ L+GM S I+AIN+DE
Sbjct: 245 AVGASRAAVDAGWIDALHQVGQTGKTVGPKIYIACAISGAIQPLAGMTGSDCIIAINKDE 304
Query: 285 DAPIFDISDYGLVGDLFEIIP 305
DAPIF + DYG+VGD+F+++P
Sbjct: 305 DAPIFKVCDYGIVGDVFKVLP 325
>sp|P52039|ETFA_CLOAB Electron transfer flavoprotein subunit alpha OS=Clostridium
acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 /
LMG 5710 / VKM B-1787) GN=etfA PE=3 SV=2
Length = 336
Score = 149 bits (377), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/321 (33%), Positives = 174/321 (54%), Gaps = 18/321 (5%)
Query: 4 LVIAEHDNSYLKTSTLNTITAATLCSD----EIHILIIGYNIEKVILDAKKVNNIKKILL 59
V AE + L+ +L + ++ E+ +++G+N EK+ D + K+L
Sbjct: 10 WVFAEQRDGELQKVSLELLGKGKEMAEKLGVELTAVLLGHNTEKMSKDLLS-HGADKVLA 68
Query: 60 VDSLYFSNNLPENIAAQISVIASNYSH--ILAPATIYGKNILPRVAALLNVMQISEIT-- 115
D+ ++ + A I + + + AT G+++ PR+AA L+ ++ T
Sbjct: 69 ADNELLAHFSTDGYAKVICDLVNERKPEILFIGATFIGRDLGPRIAARLSTGLTADCTSL 128
Query: 116 --KVCNPSTF-ERPIYSGRIIATVQSTD-IIKVITVRATNFISAKKEGNKAIIHIISKIN 171
V N RP + G +IAT+ +D ++ TVR F I K+
Sbjct: 129 DIDVENRDLLATRPAFGGNLIATIVCSDHRPQMATVRPGVFEKLPVNDANVSDDKIEKV- 187
Query: 172 YFSNTASIFISR--ELIKSKR--PELTSAKIVVAGGRGLGSSKNFKILEGLADKLNAAIG 227
TAS ++ +++K + ++ AK++VAGGRG+GS +NF+ LE LA L I
Sbjct: 188 AIKLTASDIRTKVSKVVKLAKDIADIGEAKVLVAGGRGVGSKENFEKLEELASLLGGTIA 247
Query: 228 ASRAAVDAGYISNNLQIGQTGKIVAPQLYIAIGISGAIQHLSGMKDSKIIVAINQDEDAP 287
ASRAA++ ++ +LQ+GQTGK V P LYIA GISGAIQHL+GM+DS I+AIN+D +AP
Sbjct: 248 ASRAAIEKEWVDKDLQVGQTGKTVRPTLYIACGISGAIQHLAGMQDSDYIIAINKDVEAP 307
Query: 288 IFDISDYGLVGDLFEIIPKFI 308
I ++D +VGD+ +++P+ I
Sbjct: 308 IMKVADLAIVGDVNKVVPELI 328
>sp|P53574|FIXB_AZOVI Protein FixB OS=Azotobacter vinelandii GN=fixB PE=3 SV=1
Length = 360
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 135/258 (52%), Gaps = 22/258 (8%)
Query: 67 NNLPENIAAQISVIASNYSHILAPATIYGKNILPRVAALLNVMQISEITK-VCNPSTFE- 124
N P A V A+ ++ AT G+++ VA L +++ T+ V + T
Sbjct: 97 RNEPYTKALTDLVTATQPEILMLGATTLGRDLAGSVATTLGTGLVADCTELVIDTETRNL 156
Query: 125 ---RPIYSGRIIATVQSTDIIK--VITVR---ATNFISAKKEGNKAIIHIISKINYFSNT 176
RP + G ++ S + + TVR A A + G II + FS
Sbjct: 157 ASTRPTFDGSLLCKPSSAQRHRPQMATVRPRMAMPEPDASRSGE--IIEV-----PFSMI 209
Query: 177 ASIFISR--ELIKSK---RPELTSAKIVVAGGRGLGSSKNFKILEGLADKLNAAIGASRA 231
+ I++ E I +P L A I+VAGGRGL + +NF+++ LA L A +GASR
Sbjct: 210 ETDIITKVLEFIPDDTRDKPNLPFADIIVAGGRGLRNQENFQLVWDLAKVLGAEVGASRP 269
Query: 232 AVDAGYISNNLQIGQTGKIVAPQLYIAIGISGAIQHLSGMKDSKIIVAINQDEDAPIFDI 291
V AG+ + Q+GQ+GK V P+LYIA GISGAIQH GM + +I+AIN D +APIFD
Sbjct: 270 IVQAGWAELDRQVGQSGKTVRPKLYIAAGISGAIQHRVGMDGADVIIAINTDPNAPIFDF 329
Query: 292 SDYGLVGDLFEIIPKFIK 309
+ YG+VG+ ++P +
Sbjct: 330 AHYGIVGNAITVLPALTE 347
>sp|P26483|FIXB_AZOC5 Protein FixB OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM
5975 / ORS 571) GN=fixB PE=3 SV=2
Length = 369
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 128/237 (54%), Gaps = 21/237 (8%)
Query: 87 ILAPATIYGKNILPRVAALLNVMQISEITKVCNPSTFE--------RPIYSGRIIATVQS 138
+L AT G+++ VA L ++ +T C + RP + G ++ T+ +
Sbjct: 124 LLLGATTLGRDLAGSVATTL----LTGLTADCTELDVDADGSLAATRPTFGGSLLCTIYT 179
Query: 139 TDI-IKVITVRATNFISAKKEG---NKAIIHIISKI--NYFSNTASIFISRELIKSKRPE 192
+ ++ TVR ++E + I H + + + + S R+ KS
Sbjct: 180 LNYRPQMATVRPRVMPMPEREEKPIGRIITHPLGMVEDDIVTKILSFLPDRDSAKSN--- 236
Query: 193 LTSAKIVVAGGRGLGSSKNFKILEGLADKLNAAIGASRAAVDAGYISNNLQIGQTGKIVA 252
L A +VVAGG GLGS +NF+++ LA L A G SR V G+++++ QIGQTGK +
Sbjct: 237 LAYADVVVAGGLGLGSPENFQLVRQLAGVLGAEYGCSRPLVQKGWVTSDRQIGQTGKTIR 296
Query: 253 PQLYIAIGISGAIQHLSGMKDSKIIVAINQDEDAPIFDISDYGLVGDLFEIIPKFIK 309
P+LYIA GISGAIQH G++ + +IVAIN D++APIFD + G+V D ++P +
Sbjct: 297 PKLYIAAGISGAIQHRVGVEGADMIVAINTDKNAPIFDFAHVGIVTDAIRLLPALTE 353
>sp|P10449|FIXB_BRAJA Protein FixB OS=Bradyrhizobium japonicum (strain USDA 110) GN=fixB
PE=3 SV=2
Length = 369
Score = 122 bits (305), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 112/187 (59%), Gaps = 9/187 (4%)
Query: 125 RPIYSGRIIATVQSTDI-IKVITVRATNF-ISAK--KEGNKAIIHIISKI--NYFSNTAS 178
RP + G ++ T+ + + ++ TVR + A+ ++ + ++H + + + + S
Sbjct: 166 RPTFGGSLLCTIYTLNYRPQMATVRPRVMPMPARVMRDAARIVVHPLGLVEDDIVTKVLS 225
Query: 179 IFISRELIKSKRPELTSAKIVVAGGRGLGSSKNFKILEGLADKLNAAIGASRAAVDAGYI 238
R+ S L A +VVAGG GLGS +NF+++ LA L A G SR V G++
Sbjct: 226 FLPDRDAETST---LAYADVVVAGGLGLGSPENFRLVRELAALLGAEYGCSRPLVQKGWV 282
Query: 239 SNNLQIGQTGKIVAPQLYIAIGISGAIQHLSGMKDSKIIVAINQDEDAPIFDISDYGLVG 298
+++ QIGQTGK + P+LYIA GISGAIQH G++ + +IVA+N D++APIFD + +V
Sbjct: 283 TSDRQIGQTGKTIRPKLYIAAGISGAIQHRVGVEGADLIVAVNTDKNAPIFDFAHLAIVS 342
Query: 299 DLFEIIP 305
D +++P
Sbjct: 343 DAMQLLP 349
>sp|P09819|FIXB_RHIME Protein FixB OS=Rhizobium meliloti (strain 1021) GN=fixB PE=3 SV=1
Length = 353
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 129/270 (47%), Gaps = 29/270 (10%)
Query: 59 LVDS--LYFSNNLPENIAAQISVIASNYSHILAPATIYGKNILPRVAALLNVMQISEITK 116
LV+S L N P A V+A+ +L AT G+++ VA L ++ T+
Sbjct: 78 LVESPLLAHYRNEPFTKALTDLVLANKPEILLLGATTLGRDLAGSVATTLKTGLTADCTE 137
Query: 117 VCNPS----TFERPIYSGRIIATVQSTDIIKVITVRATNFISAKKEGNKAIIHIISK--- 169
+ S RP + G ++ T+ + + + ++ + N+ II
Sbjct: 138 LNVDSDGSLAATRPTFGGSLLCTIYTLKCRPQMATVRPSVMATPQRVNRPTGSIIRHDLK 197
Query: 170 ----------INYFSNTASIFISRELIKSKRPELTSAKIVVAGGRGLGSSKNFKILEGLA 219
+ +FS+ S + L A +VVAGG GLG+ +N ++L+ LA
Sbjct: 198 MLEEEIATKVLAFFSDCDSTIAN----------LAYADVVVAGGLGLGAVQNLQLLKDLA 247
Query: 220 DKLNAAIGASRAAVDAGYISNNLQIGQTGKIVAPQLYIAIGISGAIQHLSGMKDSKIIVA 279
L G SR V G++ + QIGQTG + P+LYIA GISGA+QH G++ S +IVA
Sbjct: 248 RTLGGDFGCSRPLVQKGWMPFDRQIGQTGNTIRPKLYIAAGISGAVQHRVGVEGSDLIVA 307
Query: 280 INQDEDAPIFDISDYGLVGDLFEIIPKFIK 309
IN D +APIFD + G+V D +P +
Sbjct: 308 INTDPNAPIFDFAHLGVVADAISFLPALTE 337
>sp|P77378|YDIR_ECOLI Putative electron transfer flavoprotein subunit YdiR OS=Escherichia
coli (strain K12) GN=ydiR PE=3 SV=1
Length = 312
Score = 111 bits (277), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 132/261 (50%), Gaps = 17/261 (6%)
Query: 61 DSLYFSNNLPENIAAQISVIASNYSHILAPATIYGKNILPRVAALLNVMQISEITKV--- 117
D+L + N E+IAA + + + +L AT GK + R++ LN +++ T V
Sbjct: 59 DALQRTENYAESIAALLK--DKHPAMLLLAATKRGKALAARLSVQLNAALVNDATAVDIV 116
Query: 118 ----CNPSTFERPIYSGRIIATVQSTDIIKVITVRATNFISAKKEGNKAIIHIISKINYF 173
C E +Y G A + + +IT+ + + + + Y
Sbjct: 117 DGHIC----AEHRMYGGLAFAQEKINSPLAIITL--APGVQEPCTSDTSHQCPTETVPYV 170
Query: 174 SNTASIFISRELIKSKRP-ELTSAKIVVAGGRGLGSSKNFKILEGLADKLNAAIGASRA- 231
+ I K+ +L+ AK VV GRGL + + K++ LA LNA +G SR
Sbjct: 171 APRHEILCRERRAKAASSVDLSKAKRVVGVGRGLAAQDDLKMVHELAAVLNAEVGCSRPI 230
Query: 232 AVDAGYISNNLQIGQTGKIVAPQLYIAIGISGAIQHLSGMKDSKIIVAINQDEDAPIFDI 291
A ++ IG +G ++ LY+ +GISG IQH+ G +K+IVAIN+D++APIF+
Sbjct: 231 AEGENWMERERYIGVSGVLLKSDLYLTLGISGQIQHMVGGNGAKVIVAINKDKNAPIFNY 290
Query: 292 SDYGLVGDLFEIIPKFIKYLN 312
+DYGLVGD+++++P I L+
Sbjct: 291 ADYGLVGDIYKVVPALISQLS 311
>sp|Q53209|FIXB_RHISN Protein FixB OS=Rhizobium sp. (strain NGR234) GN=fixB PE=3 SV=1
Length = 369
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 130/270 (48%), Gaps = 25/270 (9%)
Query: 54 IKKILLVDSLYFSNNLPENIAAQISVIASNYSHILAPATIYGKNILPRVAALLNVMQISE 113
+++ LL D N P A VI +L AT G+++ VA L ++
Sbjct: 95 VEEPLLTDY----RNEPFTKALTDLVITHKPEILLLGATTLGRDLAGSVATTL----LTG 146
Query: 114 ITKVCNPSTFE--------RPIYSGRIIATVQSTDIIKVITVRATNFISAKKEGNKAIIH 165
+T C + RP + G ++ T+ + + + + + NK I
Sbjct: 147 LTADCTGLDVDEDGSLAATRPTFGGSLLCTIYTLNCRPQMATVRPRVMRMPQRSNKPIGR 206
Query: 166 IISKINYFSNTASI------FISRELIKSKRPELTSAKIVVAGGRGLGSSKNFKILEGLA 219
+I + ++ I F+S + +S L A +VVAGG GL +++N +++ LA
Sbjct: 207 VI-RHDWRMLEEDIVTKVVGFLSDD--RSGNANLAYADVVVAGGLGLSNAENLLLIKDLA 263
Query: 220 DKLNAAIGASRAAVDAGYISNNLQIGQTGKIVAPQLYIAIGISGAIQHLSGMKDSKIIVA 279
+ G SR V G++ + QIGQTGK + P+LYIA GISGA+QH G++ + +IVA
Sbjct: 264 LTIGGDYGCSRPLVQKGWMPADRQIGQTGKTIRPKLYIAAGISGAVQHRVGVEGADLIVA 323
Query: 280 INQDEDAPIFDISDYGLVGDLFEIIPKFIK 309
IN D APIFD + G+V D +P +
Sbjct: 324 INTDPHAPIFDFAHVGVVTDAVSFLPALTE 353
>sp|A7ZHD5|FIXB_ECO24 Protein FixB OS=Escherichia coli O139:H28 (strain E24377A / ETEC)
GN=fixB PE=3 SV=1
Length = 313
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 124/233 (53%), Gaps = 13/233 (5%)
Query: 87 ILAPATIYGKNILPRVAALLNVMQISEITKVC---NPSTFERPIYSGRIIATVQSTDIIK 143
+L P T GK + ++ L V ++ + V +T + +Y G I +
Sbjct: 84 VLLPNTRRGKLLAAKLGYRLKVAVSNDASTVSVQDGKATVKHMVYGGLAIGEERIATPYA 143
Query: 144 VITVRATNFISAKKEGNK-AIIHIISKINYFSNTASIFISRELIKSKRP---ELTSAKIV 199
V+T+ + F +A+ + ++ H + ++ I+R ++++ +L A++V
Sbjct: 144 VLTISSGTFDAAQPDASRTGETHTVE-----WQAPAVAITRTATQARQSNSVDLDKARLV 198
Query: 200 VAGGRGLGSSKNFKILEGLADKLNAAIGASRA-AVDAGYISNNLQIGQTGKIVAPQLYIA 258
V+ GRG+GS +N + E L + A + SR A + ++ + +G + ++ P+LY+A
Sbjct: 199 VSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLA 258
Query: 259 IGISGAIQHLSGMKDSKIIVAINQDEDAPIFDISDYGLVGDLFEIIPKFIKYL 311
+GISG IQH+ G S+ I AIN+D++APIF +DYG+VGD +I+P I L
Sbjct: 259 VGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALIAAL 311
>sp|Q1RGF6|FIXB_ECOUT Protein FixB OS=Escherichia coli (strain UTI89 / UPEC) GN=fixB PE=3
SV=1
Length = 313
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 122/229 (53%), Gaps = 13/229 (5%)
Query: 87 ILAPATIYGKNILPRVAALLNVMQISEITKVC---NPSTFERPIYSGRIIATVQSTDIIK 143
+L P T GK + ++ LN ++ + V +T + +Y G I +
Sbjct: 84 VLLPNTRRGKLLAAKLGYRLNAAVSNDASAVSVQDGKATVKHMVYGGLAIGEERIATPYA 143
Query: 144 VITVRATNFISAKKEGNK-AIIHIISKINYFSNTASIFISRELIKSKRP---ELTSAKIV 199
V+T+ + F +A+ + ++ H + ++ I+R ++++ +L A++V
Sbjct: 144 VLTISSGTFDAAQPDASRTGETHTVE-----WQAPAVAITRTATQARQSNSVDLDKARLV 198
Query: 200 VAGGRGLGSSKNFKILEGLADKLNAAIGASRA-AVDAGYISNNLQIGQTGKIVAPQLYIA 258
V+ GRG+GS +N + E L + A + SR A + ++ + +G + ++ P+LY+A
Sbjct: 199 VSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLA 258
Query: 259 IGISGAIQHLSGMKDSKIIVAINQDEDAPIFDISDYGLVGDLFEIIPKF 307
+GISG IQH+ G S+ I AIN+D++APIF +DYG+VGD +I+P
Sbjct: 259 VGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPAL 307
>sp|A1A792|FIXB_ECOK1 Protein FixB OS=Escherichia coli O1:K1 / APEC GN=fixB PE=3 SV=1
Length = 313
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 122/229 (53%), Gaps = 13/229 (5%)
Query: 87 ILAPATIYGKNILPRVAALLNVMQISEITKVC---NPSTFERPIYSGRIIATVQSTDIIK 143
+L P T GK + ++ LN ++ + V +T + +Y G I +
Sbjct: 84 VLLPNTRRGKLLAAKLGYRLNAAVSNDASAVSVQDGKATVKHMVYGGLAIGEERIATPYA 143
Query: 144 VITVRATNFISAKKEGNK-AIIHIISKINYFSNTASIFISRELIKSKRP---ELTSAKIV 199
V+T+ + F +A+ + ++ H + ++ I+R ++++ +L A++V
Sbjct: 144 VLTISSGTFDAAQPDASRTGETHTVE-----WQAPAVAITRTATQARQSNSVDLDKARLV 198
Query: 200 VAGGRGLGSSKNFKILEGLADKLNAAIGASRA-AVDAGYISNNLQIGQTGKIVAPQLYIA 258
V+ GRG+GS +N + E L + A + SR A + ++ + +G + ++ P+LY+A
Sbjct: 199 VSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLA 258
Query: 259 IGISGAIQHLSGMKDSKIIVAINQDEDAPIFDISDYGLVGDLFEIIPKF 307
+GISG IQH+ G S+ I AIN+D++APIF +DYG+VGD +I+P
Sbjct: 259 VGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPAL 307
>sp|B7MAG5|FIXB_ECO45 Protein FixB OS=Escherichia coli O45:K1 (strain S88 / ExPEC)
GN=fixB PE=3 SV=1
Length = 313
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 122/229 (53%), Gaps = 13/229 (5%)
Query: 87 ILAPATIYGKNILPRVAALLNVMQISEITKVC---NPSTFERPIYSGRIIATVQSTDIIK 143
+L P T GK + ++ LN ++ + V +T + +Y G I +
Sbjct: 84 VLLPNTRRGKLLAAKLGYRLNAAVSNDASAVSVQDGKATVKHMVYGGLAIGEERIATPYA 143
Query: 144 VITVRATNFISAKKEGNK-AIIHIISKINYFSNTASIFISRELIKSKRP---ELTSAKIV 199
V+T+ + F +A+ + ++ H + ++ I+R ++++ +L A++V
Sbjct: 144 VLTISSGTFDAAQPDASRTGETHTVE-----WQAPAVAITRTATQARQSNSVDLDKARLV 198
Query: 200 VAGGRGLGSSKNFKILEGLADKLNAAIGASRA-AVDAGYISNNLQIGQTGKIVAPQLYIA 258
V+ GRG+GS +N + E L + A + SR A + ++ + +G + ++ P+LY+A
Sbjct: 199 VSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLA 258
Query: 259 IGISGAIQHLSGMKDSKIIVAINQDEDAPIFDISDYGLVGDLFEIIPKF 307
+GISG IQH+ G S+ I AIN+D++APIF +DYG+VGD +I+P
Sbjct: 259 VGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPAL 307
>sp|P59674|FIXB_ECOL6 Protein FixB OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928
/ UPEC) GN=fixB PE=3 SV=1
Length = 313
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 122/233 (52%), Gaps = 13/233 (5%)
Query: 87 ILAPATIYGKNILPRVAALLNVMQISEITKVC---NPSTFERPIYSGRIIATVQSTDIIK 143
+L P T GK + ++ LN ++ + V +T + +Y G I +
Sbjct: 84 VLLPNTRRGKLLAAKLGYRLNAAVSNDASAVSVQDGKATVKHMVYGGLAIGEERIATPYA 143
Query: 144 VITVRATNFISAKKEGNK-AIIHIISKINYFSNTASIFISRELIKSKRP---ELTSAKIV 199
V+T+ + F A+ + ++ H + ++ I+R ++++ +L A++V
Sbjct: 144 VLTISSGTFDVAQPDASRTGETHTVE-----WQAPAVAITRTATQARQSNSVDLDKARLV 198
Query: 200 VAGGRGLGSSKNFKILEGLADKLNAAIGASRA-AVDAGYISNNLQIGQTGKIVAPQLYIA 258
V+ GRG+GS +N + E L + A + SR A + ++ + +G + ++ P+LY+A
Sbjct: 199 VSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLA 258
Query: 259 IGISGAIQHLSGMKDSKIIVAINQDEDAPIFDISDYGLVGDLFEIIPKFIKYL 311
+GISG IQH+ G S+ I AIN+D++APIF +DYG+VGD +I+P L
Sbjct: 259 VGISGQIQHMVGANASQTIFAINKDKNAPIFQFADYGIVGDAVKILPALTAAL 311
>sp|B7UI88|FIXB_ECO27 Protein FixB OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC)
GN=fixB PE=3 SV=1
Length = 313
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 122/233 (52%), Gaps = 13/233 (5%)
Query: 87 ILAPATIYGKNILPRVAALLNVMQISEITKVC---NPSTFERPIYSGRIIATVQSTDIIK 143
+L P T GK + ++ LN ++ + V +T + +Y G I +
Sbjct: 84 VLLPNTRRGKLLAAKLGYRLNAAVSNDASAVSVQDGKATVKHMVYGGLAIGEERIATPYA 143
Query: 144 VITVRATNFISAKKEGNK-AIIHIISKINYFSNTASIFISRELIKSKRP---ELTSAKIV 199
V+T+ + F A+ + ++ H + ++ I+R ++++ +L A++V
Sbjct: 144 VLTISSGTFDVAQPDASRTGETHTVE-----WQAPAVAITRTATQARQSNSVDLDKARLV 198
Query: 200 VAGGRGLGSSKNFKILEGLADKLNAAIGASRA-AVDAGYISNNLQIGQTGKIVAPQLYIA 258
V+ GRG+GS +N + E L + A + SR A + ++ + +G + ++ P+LY+A
Sbjct: 199 VSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLA 258
Query: 259 IGISGAIQHLSGMKDSKIIVAINQDEDAPIFDISDYGLVGDLFEIIPKFIKYL 311
+GISG IQH+ G S+ I AIN+D++APIF +DYG+VGD +I+P L
Sbjct: 259 VGISGQIQHMVGANASQTIFAINKDKNAPIFQFADYGIVGDAVKILPALTAAL 311
>sp|P53571|ETFA_METME Electron transfer flavoprotein subunit alpha OS=Methylophilus
methylotrophus GN=etfA PE=1 SV=2
Length = 321
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 163/322 (50%), Gaps = 37/322 (11%)
Query: 4 LVIAEHDNSYLKTSTLNTITAAT----LCSDEIHILIIGYNIEKVILDAKKVNNIKKILL 59
LVIAEH + L+ +L I AA D++ + +IG + + A VN + ++++
Sbjct: 5 LVIAEHRRNDLRPVSLELIGAANGLKKSGEDKVVVAVIGSQADAFV-PALSVNGVDELVV 63
Query: 60 V--DSLYFSNNLPENIAAQISVI--ASNYSHILAPATI----YGKNILPRV----AALLN 107
V S+ F P+ A +S + A N S +L P ++ Y ++ + A +
Sbjct: 64 VKGSSIDFD---PDVFEASVSALIAAHNPSVVLLPHSVDSLGYASSLASKTGYGFATDVY 120
Query: 108 VMQISEITKVCNPSTFERPI-----YSGRIIATVQSTDIIKVITVRATNFISAKKEGNKA 162
+++ V + + + + G+ +TV V+T+R + F + G+
Sbjct: 121 IVEYQGDELVATRGGYNQKVNVEVDFPGK--STV-------VLTIRPSVFKPLEGAGSPV 171
Query: 163 IIHIISKINYFSNTASIFISRELIKSKRPELTSAKIVVAGGRGLGSSKNFKILEGLADKL 222
+ ++ + + ++ E+ ++T+ +++ GRG+G N + LAD+
Sbjct: 172 VSNVDAPSVQSRSQNKDYV--EVGGGNDIDITTVDFIMSIGRGIGEETNVEQFRELADEA 229
Query: 223 NAAIGASRAAVDAGYISNNLQIGQTGKIVAP-QLYIAIGISGAIQHLSGMKDSKIIVAIN 281
A + SR DAG++ + Q+GQ+GK+V +LY+A+GISG+IQH++GMK I+A+N
Sbjct: 230 GATLCCSRPIADAGWLPKSRQVGQSGKVVGSCKLYVAMGISGSIQHMAGMKHVPTIIAVN 289
Query: 282 QDEDAPIFDISDYGLVGDLFEI 303
D A IF I+ YG+V D+F+I
Sbjct: 290 TDPGASIFTIAKYGIVADIFDI 311
>sp|Q0TLU7|FIXB_ECOL5 Protein FixB OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC)
GN=fixB PE=3 SV=1
Length = 313
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 122/233 (52%), Gaps = 13/233 (5%)
Query: 87 ILAPATIYGKNILPRVAALLNVMQISEITKVC---NPSTFERPIYSGRIIATVQSTDIIK 143
+L P T GK + ++ LN ++ + V +T + +Y G I +
Sbjct: 84 VLLPNTRRGKLLAAKLGYRLNAAVSNDASTVSVQDGKATVKHMVYGGLAIGEERIATPYA 143
Query: 144 VITVRATNFISAKKEGNK-AIIHIISKINYFSNTASIFISRELIKSKRP---ELTSAKIV 199
V+T+ + F A+ + ++ H + ++ I+R ++++ +L A++V
Sbjct: 144 VLTISSGTFDVAQPDASRTGETHTVE-----WQAPAVAITRTATQARQSNSVDLDKARLV 198
Query: 200 VAGGRGLGSSKNFKILEGLADKLNAAIGASRA-AVDAGYISNNLQIGQTGKIVAPQLYIA 258
V+ GRG+GS +N + E L + A + SR A + ++ + +G + ++ P+LY+A
Sbjct: 199 VSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLA 258
Query: 259 IGISGAIQHLSGMKDSKIIVAINQDEDAPIFDISDYGLVGDLFEIIPKFIKYL 311
+GISG IQH+ G S+ I AIN+D++APIF +DYG+VGD +I+P L
Sbjct: 259 VGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAAL 311
>sp|B7MNP9|FIXB_ECO81 Protein FixB OS=Escherichia coli O81 (strain ED1a) GN=fixB PE=3
SV=1
Length = 313
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 122/233 (52%), Gaps = 13/233 (5%)
Query: 87 ILAPATIYGKNILPRVAALLNVMQISEITKVC---NPSTFERPIYSGRIIATVQSTDIIK 143
+L P T GK + ++ LN ++ + V +T + +Y G I +
Sbjct: 84 VLLPNTRRGKLLAAKLGYRLNAAVSNDASAVSVQDGKATVKHMVYGGLAIGEERIATPYA 143
Query: 144 VITVRATNFISAKKEGNK-AIIHIISKINYFSNTASIFISRELIKSKRP---ELTSAKIV 199
V+T+ + F A+ + ++ H + ++ I+R ++++ +L A++V
Sbjct: 144 VLTISSGTFDVAQPDASRTGETHTVE-----WQAPAVAITRTATQARQSNSVDLDKARLV 198
Query: 200 VAGGRGLGSSKNFKILEGLADKLNAAIGASRA-AVDAGYISNNLQIGQTGKIVAPQLYIA 258
V+ GRG+GS +N + E L + A + SR A + ++ + +G + ++ P+LY+A
Sbjct: 199 VSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLA 258
Query: 259 IGISGAIQHLSGMKDSKIIVAINQDEDAPIFDISDYGLVGDLFEIIPKFIKYL 311
+GISG IQH+ G S+ I AIN+D++APIF +DYG+VGD +I+P L
Sbjct: 259 VGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAAL 311
>sp|B7NHE6|FIXB_ECO7I Protein FixB OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC)
GN=fixB PE=3 SV=1
Length = 313
Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 123/233 (52%), Gaps = 13/233 (5%)
Query: 87 ILAPATIYGKNILPRVAALLNVMQISEITKVC---NPSTFERPIYSGRIIATVQSTDIIK 143
+L P T GK + ++ L ++ + V +T + +Y G I +
Sbjct: 84 VLLPNTRRGKLLAAKLGYRLKAAVSNDASTVSVQDGKATVKHMVYGGLAIGEERIATPYA 143
Query: 144 VITVRATNFISAKKEGNK-AIIHIISKINYFSNTASIFISRELIKSKRP---ELTSAKIV 199
V+T+ + F +A+ + ++ H + + ++ I+R ++++ +L A++V
Sbjct: 144 VLTISSGTFDAAQPDASRTGETHTVEWL-----APAVAITRTATQARQSNSVDLDKARLV 198
Query: 200 VAGGRGLGSSKNFKILEGLADKLNAAIGASRA-AVDAGYISNNLQIGQTGKIVAPQLYIA 258
V+ GRG+GS +N + E L + A + SR A + ++ + +G + ++ P+LY+A
Sbjct: 199 VSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLA 258
Query: 259 IGISGAIQHLSGMKDSKIIVAINQDEDAPIFDISDYGLVGDLFEIIPKFIKYL 311
+GISG IQH+ G S+ I AIN+D++APIF +DYG+VGD +I+P L
Sbjct: 259 VGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAAL 311
>sp|Q3Z5W6|FIXB_SHISS Protein FixB OS=Shigella sonnei (strain Ss046) GN=fixB PE=3 SV=1
Length = 313
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 122/233 (52%), Gaps = 13/233 (5%)
Query: 87 ILAPATIYGKNILPRVAALLNVMQISEITKVC---NPSTFERPIYSGRIIATVQSTDIIK 143
+L P T GK + ++ L ++ + V +T + +Y G I +
Sbjct: 84 VLLPNTRRGKLLAAKLGYRLKAAVSNDASTVSVQDGKATVKHMVYGGLAIGEERIATPYA 143
Query: 144 VITVRATNFISAKKEGNK-AIIHIISKINYFSNTASIFISRELIKSKRP---ELTSAKIV 199
V+T+ + F +A+ + ++ H + ++ I+R ++++ +L A++V
Sbjct: 144 VLTISSGTFDAAQPDASRTGETHTVE-----WQAPAVAITRTATQARQSNSVDLDKARLV 198
Query: 200 VAGGRGLGSSKNFKILEGLADKLNAAIGASRA-AVDAGYISNNLQIGQTGKIVAPQLYIA 258
V+ GRG+GS +N + E L + A + SR A + ++ + +G + ++ P+LY+A
Sbjct: 199 VSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLA 258
Query: 259 IGISGAIQHLSGMKDSKIIVAINQDEDAPIFDISDYGLVGDLFEIIPKFIKYL 311
+GISG IQH+ G S+ I AIN+D++APIF +DYG+VGD +I+P L
Sbjct: 259 VGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAAL 311
>sp|Q32K55|FIXB_SHIDS Protein FixB OS=Shigella dysenteriae serotype 1 (strain Sd197)
GN=fixB PE=3 SV=1
Length = 313
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 122/233 (52%), Gaps = 13/233 (5%)
Query: 87 ILAPATIYGKNILPRVAALLNVMQISEITKVC---NPSTFERPIYSGRIIATVQSTDIIK 143
+L P T GK + ++ L ++ + V +T + +Y G I +
Sbjct: 84 VLLPNTRRGKLLAAKLGYRLKAAVSNDASTVSVQDGKATVKHMVYGGLAIGEERIATPYA 143
Query: 144 VITVRATNFISAKKEGNK-AIIHIISKINYFSNTASIFISRELIKSKRP---ELTSAKIV 199
V+T+ + F +A+ + ++ H + ++ I+R ++++ +L A++V
Sbjct: 144 VLTISSGTFDAAQPDASRTGETHTVE-----WQAPAVAITRTATQARQSNSVDLDKARLV 198
Query: 200 VAGGRGLGSSKNFKILEGLADKLNAAIGASRA-AVDAGYISNNLQIGQTGKIVAPQLYIA 258
V+ GRG+GS +N + E L + A + SR A + ++ + +G + ++ P+LY+A
Sbjct: 199 VSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLA 258
Query: 259 IGISGAIQHLSGMKDSKIIVAINQDEDAPIFDISDYGLVGDLFEIIPKFIKYL 311
+GISG IQH+ G S+ I AIN+D++APIF +DYG+VGD +I+P L
Sbjct: 259 VGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAAL 311
>sp|P31574|FIXB_ECOLI Protein FixB OS=Escherichia coli (strain K12) GN=fixB PE=3 SV=3
Length = 313
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 122/233 (52%), Gaps = 13/233 (5%)
Query: 87 ILAPATIYGKNILPRVAALLNVMQISEITKVC---NPSTFERPIYSGRIIATVQSTDIIK 143
+L P T GK + ++ L ++ + V +T + +Y G I +
Sbjct: 84 VLLPNTRRGKLLAAKLGYRLKAAVSNDASTVSVQDGKATVKHMVYGGLAIGEERIATPYA 143
Query: 144 VITVRATNFISAKKEGNK-AIIHIISKINYFSNTASIFISRELIKSKRP---ELTSAKIV 199
V+T+ + F +A+ + ++ H + ++ I+R ++++ +L A++V
Sbjct: 144 VLTISSGTFDAAQPDASRTGETHTVE-----WQAPAVAITRTATQARQSNSVDLDKARLV 198
Query: 200 VAGGRGLGSSKNFKILEGLADKLNAAIGASRA-AVDAGYISNNLQIGQTGKIVAPQLYIA 258
V+ GRG+GS +N + E L + A + SR A + ++ + +G + ++ P+LY+A
Sbjct: 199 VSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLA 258
Query: 259 IGISGAIQHLSGMKDSKIIVAINQDEDAPIFDISDYGLVGDLFEIIPKFIKYL 311
+GISG IQH+ G S+ I AIN+D++APIF +DYG+VGD +I+P L
Sbjct: 259 VGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAAL 311
>sp|B1IRD4|FIXB_ECOLC Protein FixB OS=Escherichia coli (strain ATCC 8739 / DSM 1576 /
Crooks) GN=fixB PE=3 SV=1
Length = 313
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 122/233 (52%), Gaps = 13/233 (5%)
Query: 87 ILAPATIYGKNILPRVAALLNVMQISEITKVC---NPSTFERPIYSGRIIATVQSTDIIK 143
+L P T GK + ++ L ++ + V +T + +Y G I +
Sbjct: 84 VLLPNTRRGKLLAAKLGYRLKAAVSNDASTVSVQDGKATVKHMVYGGLAIGEERIATPYA 143
Query: 144 VITVRATNFISAKKEGNK-AIIHIISKINYFSNTASIFISRELIKSKRP---ELTSAKIV 199
V+T+ + F +A+ + ++ H + ++ I+R ++++ +L A++V
Sbjct: 144 VLTISSGTFDAAQPDASRTGETHTVE-----WQAPAVAITRTATQARQSNSVDLDKARLV 198
Query: 200 VAGGRGLGSSKNFKILEGLADKLNAAIGASRA-AVDAGYISNNLQIGQTGKIVAPQLYIA 258
V+ GRG+GS +N + E L + A + SR A + ++ + +G + ++ P+LY+A
Sbjct: 199 VSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLA 258
Query: 259 IGISGAIQHLSGMKDSKIIVAINQDEDAPIFDISDYGLVGDLFEIIPKFIKYL 311
+GISG IQH+ G S+ I AIN+D++APIF +DYG+VGD +I+P L
Sbjct: 259 VGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAAL 311
>sp|B1XBG7|FIXB_ECODH Protein FixB OS=Escherichia coli (strain K12 / DH10B) GN=fixB PE=3
SV=1
Length = 313
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 122/233 (52%), Gaps = 13/233 (5%)
Query: 87 ILAPATIYGKNILPRVAALLNVMQISEITKVC---NPSTFERPIYSGRIIATVQSTDIIK 143
+L P T GK + ++ L ++ + V +T + +Y G I +
Sbjct: 84 VLLPNTRRGKLLAAKLGYRLKAAVSNDASTVSVQDGKATVKHMVYGGLAIGEERIATPYA 143
Query: 144 VITVRATNFISAKKEGNK-AIIHIISKINYFSNTASIFISRELIKSKRP---ELTSAKIV 199
V+T+ + F +A+ + ++ H + ++ I+R ++++ +L A++V
Sbjct: 144 VLTISSGTFDAAQPDASRTGETHTVE-----WQAPAVAITRTATQARQSNSVDLDKARLV 198
Query: 200 VAGGRGLGSSKNFKILEGLADKLNAAIGASRA-AVDAGYISNNLQIGQTGKIVAPQLYIA 258
V+ GRG+GS +N + E L + A + SR A + ++ + +G + ++ P+LY+A
Sbjct: 199 VSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLA 258
Query: 259 IGISGAIQHLSGMKDSKIIVAINQDEDAPIFDISDYGLVGDLFEIIPKFIKYL 311
+GISG IQH+ G S+ I AIN+D++APIF +DYG+VGD +I+P L
Sbjct: 259 VGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAAL 311
>sp|C4ZPW8|FIXB_ECOBW Protein FixB OS=Escherichia coli (strain K12 / MC4100 / BW2952)
GN=fixB PE=3 SV=1
Length = 313
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 122/233 (52%), Gaps = 13/233 (5%)
Query: 87 ILAPATIYGKNILPRVAALLNVMQISEITKVC---NPSTFERPIYSGRIIATVQSTDIIK 143
+L P T GK + ++ L ++ + V +T + +Y G I +
Sbjct: 84 VLLPNTRRGKLLAAKLGYRLKAAVSNDASTVSVQDGKATVKHMVYGGLAIGEERIATPYA 143
Query: 144 VITVRATNFISAKKEGNK-AIIHIISKINYFSNTASIFISRELIKSKRP---ELTSAKIV 199
V+T+ + F +A+ + ++ H + ++ I+R ++++ +L A++V
Sbjct: 144 VLTISSGTFDAAQPDASRTGETHTVE-----WQAPAVAITRTATQARQSNSVDLDKARLV 198
Query: 200 VAGGRGLGSSKNFKILEGLADKLNAAIGASRA-AVDAGYISNNLQIGQTGKIVAPQLYIA 258
V+ GRG+GS +N + E L + A + SR A + ++ + +G + ++ P+LY+A
Sbjct: 199 VSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLA 258
Query: 259 IGISGAIQHLSGMKDSKIIVAINQDEDAPIFDISDYGLVGDLFEIIPKFIKYL 311
+GISG IQH+ G S+ I AIN+D++APIF +DYG+VGD +I+P L
Sbjct: 259 VGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAAL 311
>sp|B6HYZ3|FIXB_ECOSE Protein FixB OS=Escherichia coli (strain SE11) GN=fixB PE=3 SV=1
Length = 313
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 122/233 (52%), Gaps = 13/233 (5%)
Query: 87 ILAPATIYGKNILPRVAALLNVMQISEITKVC---NPSTFERPIYSGRIIATVQSTDIIK 143
+L P T GK + ++ L ++ + V +T + +Y G I +
Sbjct: 84 VLLPNTRRGKLLAAKLGYRLKAAVSNDASTVSVQDGKATVKHMVYGGLAIGEERIATPYA 143
Query: 144 VITVRATNFISAKKEGNK-AIIHIISKINYFSNTASIFISRELIKSKRP---ELTSAKIV 199
V+T+ + F +A+ + ++ H + ++ I+R ++++ +L A++V
Sbjct: 144 VLTISSGTFDAAQPDASRTGETHTVE-----WQAPAVAITRTATQARQSNSVDLDKARLV 198
Query: 200 VAGGRGLGSSKNFKILEGLADKLNAAIGASRA-AVDAGYISNNLQIGQTGKIVAPQLYIA 258
V+ GRG+GS +N + E L + A + SR A + ++ + +G + ++ P+LY+A
Sbjct: 199 VSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLA 258
Query: 259 IGISGAIQHLSGMKDSKIIVAINQDEDAPIFDISDYGLVGDLFEIIPKFIKYL 311
+GISG IQH+ G S+ I AIN+D++APIF +DYG+VGD +I+P L
Sbjct: 259 VGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAAL 311
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,214,324
Number of Sequences: 539616
Number of extensions: 4196039
Number of successful extensions: 13541
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 13374
Number of HSP's gapped (non-prelim): 84
length of query: 312
length of database: 191,569,459
effective HSP length: 117
effective length of query: 195
effective length of database: 128,434,387
effective search space: 25044705465
effective search space used: 25044705465
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)