Query psy9406
Match_columns 312
No_of_seqs 178 out of 1193
Neff 7.3
Searched_HMMs 29240
Date Fri Aug 16 18:22:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9406.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9406hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1efv_A Electron transfer flavo 100.0 1E-102 4E-107 733.0 34.2 310 1-312 2-313 (315)
2 1efp_A ETF, protein (electron 100.0 8E-101 3E-105 718.4 32.8 305 2-311 1-307 (307)
3 1o97_D Electron transferring f 100.0 1.9E-99 7E-104 712.7 32.4 305 2-312 2-319 (320)
4 3ih5_A Electron transfer flavo 100.0 8.8E-38 3E-42 278.9 14.5 183 1-184 3-210 (217)
5 3fet_A Electron transfer flavo 100.0 8E-30 2.7E-34 218.4 15.4 159 1-183 4-165 (166)
6 1o97_C Electron transferring f 99.9 4E-23 1.4E-27 189.1 17.7 141 13-156 34-191 (264)
7 1efp_B ETF, protein (electron 99.9 5.7E-22 2E-26 180.3 17.2 169 13-185 34-226 (252)
8 1efv_B Electron transfer flavo 99.9 1.1E-21 3.8E-26 178.6 18.4 170 13-186 37-230 (255)
9 1ozh_A ALS, acetolactate synth 96.3 0.03 1E-06 55.6 12.4 111 197-311 209-335 (566)
10 4feg_A Pyruvate oxidase; carba 95.7 0.07 2.4E-06 53.4 11.7 114 194-311 210-337 (603)
11 3lq1_A 2-succinyl-5-enolpyruvy 95.7 0.043 1.5E-06 54.7 9.9 112 197-311 225-352 (578)
12 1ybh_A Acetolactate synthase, 95.6 0.086 3E-06 52.5 11.8 108 197-311 216-341 (590)
13 2pgn_A Cyclohexane-1,2-dione h 95.5 0.03 1E-06 55.9 8.1 113 197-311 207-333 (589)
14 2q28_A Oxalyl-COA decarboxylas 95.1 0.048 1.6E-06 54.0 8.3 113 197-311 213-333 (564)
15 2c31_A Oxalyl-COA decarboxylas 95.0 0.049 1.7E-06 54.0 8.0 116 194-311 211-337 (568)
16 1t9b_A Acetolactate synthase, 95.0 0.063 2.1E-06 54.7 8.8 110 198-311 292-428 (677)
17 2iht_A Carboxyethylarginine sy 95.0 0.052 1.8E-06 54.0 8.0 112 197-311 218-350 (573)
18 2uz1_A Benzaldehyde lyase; thi 94.8 0.064 2.2E-06 53.2 7.9 113 197-311 206-333 (563)
19 3eya_A Pyruvate dehydrogenase 94.7 0.11 3.7E-06 51.3 9.5 112 193-311 198-323 (549)
20 2x7j_A 2-succinyl-5-enolpyruvy 94.6 0.096 3.3E-06 52.4 8.9 110 198-311 246-372 (604)
21 1s5p_A NAD-dependent deacetyla 94.6 0.04 1.4E-06 48.8 5.3 57 254-311 169-230 (235)
22 2pan_A Glyoxylate carboligase; 94.1 0.11 3.8E-06 52.0 8.0 109 198-311 229-356 (616)
23 1q1a_A HST2 protein; ternary c 94.0 0.059 2E-06 49.1 5.3 61 252-312 211-278 (289)
24 1v5e_A Pyruvate oxidase; oxido 93.8 0.29 9.9E-06 48.8 10.4 110 197-311 207-330 (590)
25 1q6z_A BFD, BFDC, benzoylforma 93.6 0.069 2.4E-06 52.4 5.4 110 198-311 203-329 (528)
26 1ma3_A SIR2-AF2, transcription 93.0 0.078 2.7E-06 47.4 4.3 59 253-312 184-247 (253)
27 1yc5_A NAD-dependent deacetyla 92.9 0.097 3.3E-06 46.5 4.7 59 253-312 181-244 (246)
28 1q14_A HST2 protein; histone d 92.6 0.13 4.4E-06 48.5 5.3 61 251-311 218-285 (361)
29 2hjh_A NAD-dependent histone d 92.3 0.2 7E-06 46.9 6.3 58 252-311 255-316 (354)
30 1m2k_A Silent information regu 91.8 0.24 8.2E-06 44.1 5.9 57 254-311 179-240 (249)
31 3glr_A NAD-dependent deacetyla 90.6 0.29 1E-05 44.5 5.2 60 252-311 197-263 (285)
32 3k35_A NAD-dependent deacetyla 90.0 0.47 1.6E-05 43.8 6.2 60 252-312 206-270 (318)
33 1j8f_A SIRT2, sirtuin 2, isofo 89.9 0.48 1.6E-05 43.8 6.1 61 252-312 220-303 (323)
34 3riy_A NAD-dependent deacetyla 89.1 0.39 1.3E-05 43.3 4.9 56 252-308 212-272 (273)
35 3pki_A NAD-dependent deacetyla 88.4 0.67 2.3E-05 43.4 6.0 59 252-311 206-269 (355)
36 3cf4_G Acetyl-COA decarboxylas 87.2 0.31 1E-05 40.6 2.7 108 198-311 37-167 (170)
37 3u31_A SIR2A, transcriptional 86.7 0.51 1.7E-05 43.0 4.0 58 252-311 216-279 (290)
38 4iao_A NAD-dependent histone d 84.3 1.4 4.8E-05 42.9 6.0 58 252-311 393-454 (492)
39 2vbi_A Pyruvate decarboxylase; 80.0 6.2 0.00021 38.7 9.1 110 197-311 211-335 (566)
40 3hww_A 2-succinyl-5-enolpyruvy 79.3 3.8 0.00013 40.2 7.2 106 197-308 222-338 (556)
41 1uan_A Hypothetical protein TT 78.7 13 0.00044 32.1 9.7 90 2-95 3-107 (227)
42 2ixd_A LMBE-related protein; h 75.1 17 0.00059 31.6 9.7 93 2-95 5-109 (242)
43 2wvg_A PDC, pyruvate decarboxy 74.6 8.8 0.0003 37.6 8.4 114 193-311 206-335 (568)
44 1ytl_A Acetyl-COA decarboxylas 69.9 2.7 9.2E-05 35.2 2.9 64 195-261 36-117 (174)
45 2nxw_A Phenyl-3-pyruvate decar 58.9 13 0.00046 36.3 6.0 109 197-311 224-348 (565)
46 2vk8_A Pyruvate decarboxylase 55.4 11 0.00038 36.8 4.7 108 197-311 213-337 (563)
47 1q74_A 1D-MYO-inosityl 2-aceta 51.5 49 0.0017 29.7 8.1 87 2-89 6-135 (303)
48 3ble_A Citramalate synthase fr 49.1 1.5E+02 0.0052 26.8 11.7 89 16-107 137-237 (337)
49 3qe1_A Sorting nexin-27, G pro 47.1 22 0.00074 26.2 4.2 38 247-284 37-74 (107)
50 4fzr_A SSFS6; structural genom 45.3 60 0.0021 29.3 7.8 36 1-37 16-51 (398)
51 1ydn_A Hydroxymethylglutaryl-C 45.3 1.6E+02 0.0054 25.9 11.3 87 16-105 120-221 (295)
52 3etn_A Putative phosphosugar i 42.2 14 0.00049 31.4 2.8 94 195-298 58-159 (220)
53 1ovm_A Indole-3-pyruvate decar 40.6 12 0.00042 36.4 2.3 105 197-309 211-333 (552)
54 1zud_1 Adenylyltransferase THI 39.7 99 0.0034 26.7 8.0 80 32-112 29-148 (251)
55 3h4t_A Glycosyltransferase GTF 38.7 83 0.0028 28.7 7.7 104 1-113 1-122 (404)
56 2vbf_A Branched-chain alpha-ke 37.7 18 0.00063 35.3 3.1 110 197-311 230-354 (570)
57 3tsa_A SPNG, NDP-rhamnosyltran 37.5 61 0.0021 29.0 6.5 37 77-116 106-144 (391)
58 3vot_A L-amino acid ligase, BL 36.1 1.5E+02 0.005 27.3 9.1 80 20-109 19-100 (425)
59 3hba_A Putative phosphosugar i 36.1 1E+02 0.0036 27.8 7.8 97 194-299 40-142 (334)
60 1jw9_B Molybdopterin biosynthe 35.9 1.1E+02 0.0038 26.2 7.7 80 32-112 32-151 (249)
61 3p0f_A Uridine phosphorylase 2 35.3 25 0.00084 31.7 3.3 50 202-279 95-144 (297)
62 3otg_A CALG1; calicheamicin, T 35.1 54 0.0018 29.6 5.7 36 76-114 121-158 (412)
63 3oti_A CALG3; calicheamicin, T 34.7 45 0.0015 30.2 5.1 31 83-116 130-160 (398)
64 1ydo_A HMG-COA lyase; TIM-barr 34.4 2.5E+02 0.0084 25.1 10.0 86 18-106 124-224 (307)
65 3s5j_B Ribose-phosphate pyroph 33.4 1.6E+02 0.0055 26.8 8.6 98 14-111 63-190 (326)
66 4ffl_A PYLC; amino acid, biosy 33.4 31 0.001 31.2 3.7 26 277-302 27-52 (363)
67 2iuy_A Avigt4, glycosyltransfe 33.4 1.9E+02 0.0064 25.0 9.0 83 18-112 177-270 (342)
68 1jx7_A Hypothetical protein YC 33.2 89 0.003 22.9 5.8 41 1-41 2-46 (117)
69 2l2q_A PTS system, cellobiose- 33.1 1.1E+02 0.0038 22.7 6.3 82 197-311 6-103 (109)
70 3dah_A Ribose-phosphate pyroph 32.7 2.2E+02 0.0076 25.7 9.4 97 15-111 68-193 (319)
71 3bpu_A Membrane-associated gua 32.6 32 0.0011 24.2 3.0 28 254-283 28-55 (88)
72 2cw6_A Hydroxymethylglutaryl-C 32.3 2.6E+02 0.0089 24.6 12.8 87 17-106 122-223 (298)
73 1nvm_A HOA, 4-hydroxy-2-oxoval 32.2 2.7E+02 0.0094 25.0 10.1 90 16-108 120-219 (345)
74 2ji4_A Phosphoribosyl pyrophos 30.7 2.3E+02 0.0078 26.2 9.3 97 14-110 92-217 (379)
75 1w9e_A Syntenin 1; cell adhesi 29.2 40 0.0014 26.9 3.4 40 244-283 18-57 (166)
76 3sho_A Transcriptional regulat 29.2 15 0.00051 29.9 0.7 95 193-299 36-139 (187)
77 1j5x_A Glucosamine-6-phosphate 29.2 25 0.00084 32.1 2.3 98 192-299 48-152 (342)
78 3rjz_A N-type ATP pyrophosphat 29.1 2.3E+02 0.0077 24.5 8.4 104 1-112 5-121 (237)
79 3ga2_A Endonuclease V; alpha-b 29.1 41 0.0014 29.6 3.6 65 195-260 109-193 (246)
80 2ego_A General receptor for ph 28.7 48 0.0017 23.7 3.5 35 249-283 33-67 (96)
81 3fro_A GLGA glycogen synthase; 28.6 3.1E+02 0.011 24.3 11.4 84 19-112 268-359 (439)
82 3e17_A Tight junction protein 27.6 55 0.0019 23.1 3.6 36 248-283 16-52 (88)
83 2eaq_A LIM domain only protein 27.5 51 0.0017 23.1 3.4 32 252-283 27-58 (90)
84 3dff_A Teicoplanin pseudoaglyc 26.9 3.1E+02 0.011 23.8 9.5 25 71-95 134-160 (273)
85 2e5f_A Hypothetical protein PH 26.4 26 0.00089 31.6 1.9 94 192-299 27-127 (325)
86 3oy2_A Glycosyltransferase B73 25.7 3.3E+02 0.011 24.1 9.5 86 19-112 200-302 (413)
87 2q9v_A Membrane-associated gua 25.4 67 0.0023 22.4 3.7 29 255-283 29-58 (90)
88 3fro_A GLGA glycogen synthase; 25.1 2.7E+02 0.0092 24.6 8.7 39 1-39 3-45 (439)
89 2gek_A Phosphatidylinositol ma 24.7 73 0.0025 28.3 4.6 110 1-114 21-137 (406)
90 2rcz_A Tight junction protein 23.2 77 0.0026 21.4 3.5 31 253-283 21-52 (81)
91 1uit_A Human discs large 5 pro 23.1 96 0.0033 23.0 4.4 30 254-283 43-72 (117)
92 3dzc_A UDP-N-acetylglucosamine 23.0 1.4E+02 0.0047 27.3 6.3 106 2-111 27-139 (396)
93 3h5n_A MCCB protein; ubiquitin 23.0 3.5E+02 0.012 24.5 9.0 80 33-113 120-240 (353)
94 1g9o_A NHE-RF; PDZ domain, com 23.0 85 0.0029 21.9 3.9 31 253-283 27-57 (91)
95 3cyy_A Tight junction protein 22.2 83 0.0028 22.0 3.6 31 253-283 23-54 (92)
96 2eeg_A PDZ and LIM domain prot 22.0 49 0.0017 23.6 2.3 31 253-283 32-62 (94)
97 2i04_A Membrane-associated gua 21.8 89 0.003 21.5 3.7 30 254-283 26-56 (85)
98 3g68_A Putative phosphosugar i 21.0 1.1E+02 0.0038 27.8 5.1 99 191-299 29-134 (352)
99 2qzs_A Glycogen synthase; glyc 20.8 2.2E+02 0.0076 26.1 7.3 83 20-112 309-395 (485)
100 3dfi_A Pseudoaglycone deacetyl 20.7 2E+02 0.0068 25.1 6.5 25 71-95 131-157 (270)
101 1q3o_A Shank1; PDZ, GKAP, pept 20.5 94 0.0032 22.7 3.7 30 254-283 46-75 (109)
102 2vsy_A XCC0866; transferase, g 20.4 5.3E+02 0.018 24.0 10.6 83 20-112 392-481 (568)
103 3h8v_A Ubiquitin-like modifier 20.3 3.1E+02 0.011 24.3 7.8 33 31-64 36-70 (292)
104 2f5y_A Regulator of G-protein 20.2 81 0.0028 22.2 3.2 29 255-283 26-54 (91)
105 2v90_A PDZ domain-containing p 20.1 89 0.0031 22.1 3.5 30 254-283 31-60 (96)
106 2uzc_A Human pdlim5, PDZ and L 20.1 74 0.0025 22.1 3.0 30 254-283 28-57 (88)
107 3dxi_A Putative aldolase; TIM 20.0 4.8E+02 0.016 23.4 10.0 89 16-106 114-209 (320)
No 1
>1efv_A Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 c.31.1.2 PDB: 2a1u_A* 1t9g_R* 2a1t_R*
Probab=100.00 E-value=1.2e-102 Score=733.01 Aligned_cols=310 Identities=51% Similarity=0.775 Sum_probs=285.2
Q ss_pred CCEEEEEEeCCCccChHHHHHHHHHHhcCCcEEEEEEcCCchHHHHHHhhcCCccEEEEecCCCCCCCCHHHHHHHHHHH
Q psy9406 1 MPALVIAEHDNSYLKTSTLNTITAATLCSDEIHILIIGYNIEKVILDAKKVNNIKKILLVDSLYFSNNLPENIAAQISVI 80 (312)
Q Consensus 1 m~ilv~~E~~~g~l~~~slEll~~A~~Lg~~V~av~~G~~~~~~a~~~~~~~Gad~V~~~~~~~l~~~~~e~~a~~l~~l 80 (312)
|++|||+||++|.+++.++|++++|++|+++|+++++|++.++.++++...+|+|+||+++++.|++|+++.|+++|.++
T Consensus 2 m~~lv~~e~~~g~l~~~~~eal~aA~~La~~V~av~~G~~~~~~~~~a~~a~GaDkv~~v~d~~l~~~~~~~~a~~La~l 81 (315)
T 1efv_A 2 QSTLVIAEHANDSLAPITLNTITAATRLGGEVSCLVAGTKCDKVAQDLCKVAGIAKVLVAQHDVYKGLLPEELTPLILAT 81 (315)
T ss_dssp CEEEEECCEETTEECTHHHHHHHHHHTTTSEEEEEEEESCCHHHHHHHHHSTTCCEEEEEECGGGTTCCHHHHHHHHHHH
T ss_pred ceEEEEEEccCCCcCHHHHHHHHHHHHhcCcEEEEEECCchHHHHHHHHHhcCCCEEEEecCchhccCCHHHHHHHHHHH
Confidence 78999999999999999999999999998899999999887667777733489999999999999999999999999999
Q ss_pred Hh--CCcEEEEcCCCCcccHHHHHHHHcCCceeeeEEEeeCCCeEEEEccCceEEEEEEECCCeEEEEEcCCCCcccccC
Q psy9406 81 AS--NYSHILAPATIYGKNILPRVAALLNVMQISEITKVCNPSTFERPIYSGRIIATVQSTDIIKVITVRATNFISAKKE 158 (312)
Q Consensus 81 ~~--~~~~IL~~aT~~GrdLaprlAarL~~~lvadv~~l~~~~~~~R~~ygG~~~a~i~~~~~p~v~Tvr~g~f~~~~~~ 158 (312)
++ +|++||+|+|++||+++||+|++|++|++|||++++.+++++||+|||+.++++++++.|+|+|+|++.|+|.+..
T Consensus 82 i~~~~pdlVL~g~ts~G~~laprlAa~L~~~~vtdv~~l~~~~~~~R~~~gG~~~~tv~~~~~p~viTVr~~~f~~~~~~ 161 (315)
T 1efv_A 82 QKQFNYTHICAGASAFGKNLLPRVAAKLEVAPISDIIAIKSPDTFVRTIYAGNALCTVKCDEKVKVFSVRGTSFDAAATS 161 (315)
T ss_dssp HHHHCCSEEEEESSHHHHHHHHHHHHHHTCCCEEEECEEEETTEEEEEETTTTEEEEEEECCSSEEEEECGGGSCCCCSS
T ss_pred HHhcCCCEEEEcCCCCcchHHHHHHHHhCCCccccEEEeccCCEEEEEcCCCEEEEEEEeCCCCeEEEEcCCCCCCCCCC
Confidence 76 6899999999999999999999999999999999997779999999999999999988788999999999986644
Q ss_pred CCcceEEEeeccccCCCCceEEEEEEeccCCCCCCCCCcEEEEeCccCCCccchHHHHHHHHHhCCeeeecHhhHhcCCC
Q psy9406 159 GNKAIIHIISKINYFSNTASIFISRELIKSKRPELTSAKIVVAGGRGLGSSKNFKILEGLADKLNAAIGASRAAVDAGYI 238 (312)
Q Consensus 159 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~vvV~~GrG~~~~e~~~~~~~LA~~lga~vg~SRp~vd~gw~ 238 (312)
+++++++.++.+ ......+++.....++++++|++|++|||+|||++++|||+++++||++|||++|||||+||+||+
T Consensus 162 ~~~~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~L~~A~ivVsgGrG~~~~e~f~~~~~LA~~Lga~vgaSR~~vd~Gw~ 239 (315)
T 1efv_A 162 GGSASSEKASST--SPVEISEWLDQKLTKSDRPELTGAKVVVSGGRGLKSGENFKLLYDLADQLHAAVGASRAAVDAGFV 239 (315)
T ss_dssp SCCCEEEECCCC--CCCCSEEEEEEEECCCCSCCGGGCSEEEEECGGGCSTGGGHHHHHHHHHHTCEEEECHHHHHTTSS
T ss_pred CCCcceEEeccC--CCccceEEEEEEecccCCcCcCCCCEEEEcCCcCCChHHHHHHHHHHHHhCCceeecHHHHhCCCC
Confidence 456778776652 222346655554445778999999999999999999999999999999999999999999999999
Q ss_pred CCCeEeccCCceeCCceEEEEeeccchhhhcccCCCcEEEEEcCCCCCCcccccceEEeecHhHHHHHHHhhhC
Q psy9406 239 SNNLQIGQTGKIVAPQLYIAIGISGAIQHLSGMKDSKIIVAINQDEDAPIFDISDYGLVGDLFEIIPKFIKYLN 312 (312)
Q Consensus 239 ~~~~qIG~sG~~v~P~lYia~GISGa~qH~~G~~~s~~IvAIN~D~~ApIf~~aDygiVgD~~~vlp~l~~~l~ 312 (312)
|+++|||||||+|+|+||||||||||+||++||++||+||||||||+||||++||||||||+|+|+|+|+++||
T Consensus 240 ~~~~QVGqTGk~V~P~lYiA~GISGAiQHlaGm~~s~~IVAIN~D~~ApIf~~ADygiVgDl~~v~P~L~~~l~ 313 (315)
T 1efv_A 240 PNDMQVGQTGKIVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEILK 313 (315)
T ss_dssp CGGGBBSTTSBCCCCSEEEEESCCCCHHHHTTTTTCSEEEEEESCTTCGGGGTCSEEEESCHHHHHHHHHHHTC
T ss_pred CHHheeccCCcccCcceEEEecccCcHHHHhhcccCCEEEEEeCCCCCCcchhcCeEEeeeHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999986
No 2
>1efp_A ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3 c.31.1.2
Probab=100.00 E-value=7.8e-101 Score=718.42 Aligned_cols=305 Identities=49% Similarity=0.770 Sum_probs=280.1
Q ss_pred CEEEEEEeCCCccC-hHHHHHHHHHHhcCCcEEEEEEcCCchHH-HHHHhhcCCccEEEEecCCCCCCCCHHHHHHHHHH
Q psy9406 2 PALVIAEHDNSYLK-TSTLNTITAATLCSDEIHILIIGYNIEKV-ILDAKKVNNIKKILLVDSLYFSNNLPENIAAQISV 79 (312)
Q Consensus 2 ~ilv~~E~~~g~l~-~~slEll~~A~~Lg~~V~av~~G~~~~~~-a~~~~~~~Gad~V~~~~~~~l~~~~~e~~a~~l~~ 79 (312)
+||||+||++|.++ +.++|++++|++|+ +|+++++|++.++. .+++.. +|+|+||+++++.|++|+++.|+++|.+
T Consensus 1 ~ilv~~e~~~g~l~~~~~~eal~aA~~Lg-~V~av~~G~~~~~~~~~~a~a-~GaDkv~~v~d~~l~~~~~~~~a~~La~ 78 (307)
T 1efp_A 1 AVLLLGEVTNGALNRDATAKAVAAVKALG-DVTVLCAGASAKAAAEEAAKI-AGVAKVLVAEDALYGHRLAEPTAALIVG 78 (307)
T ss_dssp CEEEECCBSSSCBCHHHHHHHHHHHGGGS-CEEEEEEETTCHHHHHHHHTS-TTEEEEEEEECGGGTTCCHHHHHHHHHH
T ss_pred CEEEEEeccCCEeCchhhHHHHHHHHHhC-CEEEEEECCchHHHHHHHHHh-cCCCEEEEecCchhccCCHHHHHHHHHH
Confidence 48999999999999 99999999999995 99999999876554 344444 8999999999999999999999999999
Q ss_pred HHhCCcEEEEcCCCCcccHHHHHHHHcCCceeeeEEEeeCCCeEEEEccCceEEEEEEECCCeEEEEEcCCCCcccccCC
Q psy9406 80 IASNYSHILAPATIYGKNILPRVAALLNVMQISEITKVCNPSTFERPIYSGRIIATVQSTDIIKVITVRATNFISAKKEG 159 (312)
Q Consensus 80 l~~~~~~IL~~aT~~GrdLaprlAarL~~~lvadv~~l~~~~~~~R~~ygG~~~a~i~~~~~p~v~Tvr~g~f~~~~~~~ 159 (312)
+.++|++||+|+|++||+++||+|++|++|++|||++++.++.++||+|||+.+++++++++|+|+|+|++.|+|.+ .+
T Consensus 79 ~~~~pd~VL~g~ts~G~~laprlAa~L~~~~vtdv~~l~~~~~~~R~~~gG~~~~tv~~~~~p~viTVr~~~f~~~~-~~ 157 (307)
T 1efp_A 79 LAGDYSHIAAPATTDAKNVMPRVAALLDVMVLSDVSAILDADTFERPIYAGNAIQVVKSKDAKKVFTIRTASFDAAG-EG 157 (307)
T ss_dssp HHTTCSEEEEESSHHHHHHHHHHHHHTTCCEEEEESEECSSSEEEEEEGGGTEEEEEEECSSSEEEEECGGGSCCCC-SS
T ss_pred HccCCCEEEEeCCcchhhHHHHHHHHhCCCccccEEEEccCCEEEEECCCCEEEEEEEeCCCCEEEEEcCCCCCCCC-CC
Confidence 94479999999999999999999999999999999999987799999999999999999888999999999999764 44
Q ss_pred CcceEEEeeccccCCCCceEEEEEEeccCCCCCCCCCcEEEEeCccCCCccchHHHHHHHHHhCCeeeecHhhHhcCCCC
Q psy9406 160 NKAIIHIISKINYFSNTASIFISRELIKSKRPELTSAKIVVAGGRGLGSSKNFKILEGLADKLNAAIGASRAAVDAGYIS 239 (312)
Q Consensus 160 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~vvV~~GrG~~~~e~~~~~~~LA~~lga~vg~SRp~vd~gw~~ 239 (312)
++++++.++.+ ......++++.....+++++|++|++|||+|||++++|||+++++||++|||++|||||+||+||+|
T Consensus 158 ~~~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~L~~A~ivVsgGRG~~~~e~f~~~~~LA~~Lga~vgaSR~~vd~Gw~~ 235 (307)
T 1efp_A 158 GTAPVTETAAA--ADPGLSSWVADEVAESDRPELTSARRVVSGGRGLGSKESFAIIEELADKLGAAVGASRAAVDSGYAP 235 (307)
T ss_dssp CCCCCBCCCCC--CCCCSEEEEEEEECCCCSCCTTTCSEEEEECGGGCSSSTTHHHHHHHHHHTCEEEECHHHHHTTSSC
T ss_pred CCcceEEeccc--cCcCceEEEEEEecccCCCCcCCCCEEEEcCCcCCCHHHHHHHHHHHHHhCCceeecHHHHhCCCCC
Confidence 56667665542 2235577787766667789999999999999999999999999999999999999999999999999
Q ss_pred CCeEeccCCceeCCceEEEEeeccchhhhcccCCCcEEEEEcCCCCCCcccccceEEeecHhHHHHHHHhhh
Q psy9406 240 NNLQIGQTGKIVAPQLYIAIGISGAIQHLSGMKDSKIIVAINQDEDAPIFDISDYGLVGDLFEIIPKFIKYL 311 (312)
Q Consensus 240 ~~~qIG~sG~~v~P~lYia~GISGa~qH~~G~~~s~~IvAIN~D~~ApIf~~aDygiVgD~~~vlp~l~~~l 311 (312)
+++|||||||+|+|+||||||||||+||++||++||+||||||||+||||++||||||||+|+|+|+|+++|
T Consensus 236 ~~~QVGqTGk~V~P~lYiA~GISGAiQHlaGm~~s~~IVAIN~D~~ApIF~~ADygiVgDl~~v~P~L~~~l 307 (307)
T 1efp_A 236 NDWQVGQTGKVVAPELYVAVGISGAIQHLAGMKDSKVIVAINKDEEAPIFQIADYGLVGDLFSVVPELTGKL 307 (307)
T ss_dssp GGGBBSSSSBCCCCSEEEEESCCCCHHHHTTTTTCSEEEEEESCTTCGGGGTCSEEEESCHHHHHHHHHHTC
T ss_pred hhhEeccCCcccCCceEEEEeccCcHHHHhhhccCCEEEEEeCCCCCCcccccCeEEeeeHHHHHHHHHhhC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999986
No 3
>1o97_D Electron transferring flavoprotein alpha-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 c.31.1.2 PDB: 1o95_D* 1o96_B* 1o94_D* 3clu_D* 3clt_D* 3clr_D* 3cls_D*
Probab=100.00 E-value=1.9e-99 Score=712.72 Aligned_cols=305 Identities=27% Similarity=0.419 Sum_probs=275.8
Q ss_pred CEEEEEEeCCCccChHHHHHHHHHHhcC--C--cEEEEEEcCCchHHHHH-HhhcCCccEEEEecCCCCCCCCHHHHHHH
Q psy9406 2 PALVIAEHDNSYLKTSTLNTITAATLCS--D--EIHILIIGYNIEKVILD-AKKVNNIKKILLVDSLYFSNNLPENIAAQ 76 (312)
Q Consensus 2 ~ilv~~E~~~g~l~~~slEll~~A~~Lg--~--~V~av~~G~~~~~~a~~-~~~~~Gad~V~~~~~~~l~~~~~e~~a~~ 76 (312)
+||||+||.+|.+++.++|++++|++|+ + +|+++++|++.+ .+++ +.. +|+|++|+++++.| +|+++.|+++
T Consensus 2 ~ilv~~e~~~g~l~~~~~eal~~A~~L~e~g~~~V~av~~G~~~~-~~~~~a~a-~GaDkv~~v~d~~l-~~~~~~~a~~ 78 (320)
T 1o97_D 2 KILVIAEHRRNDLRPVSLELIGAANGLKKSGEDKVVVAVIGSQAD-AFVPALSV-NGVDELVVVKGSSI-DFDPDVFEAS 78 (320)
T ss_dssp EEEEECCEETTEECTHHHHHHHHHHHHCSSTTCEEEEEEESTTGG-GGHHHHCB-TTCSEEEEEECSCS-SCCHHHHHHH
T ss_pred eEEEEEeCcCCCcCHHHHHHHHHHHHHhhCCCCcEEEEEECCcHH-HHHHHHHh-cCCceEEEEeCccc-CCCHHHHHHH
Confidence 4899999999999999999999999996 4 899999998765 6666 454 89999999999999 9999999999
Q ss_pred HHHHHh--CCcEEEEcCCCCcccHHHHHHHHcCCceeeeEEEeeC-CC--eEEEEccCceEEEEEEECCC-eEEEEEcCC
Q psy9406 77 ISVIAS--NYSHILAPATIYGKNILPRVAALLNVMQISEITKVCN-PS--TFERPIYSGRIIATVQSTDI-IKVITVRAT 150 (312)
Q Consensus 77 l~~l~~--~~~~IL~~aT~~GrdLaprlAarL~~~lvadv~~l~~-~~--~~~R~~ygG~~~a~i~~~~~-p~v~Tvr~g 150 (312)
|.++++ +|++||+|+|++||+++||+|++|++|++|||++++. ++ .++||+|||+.++++++++. |+|+|+|++
T Consensus 79 La~~i~~~~pdlVL~g~ts~G~~laprlAa~L~~~~vtdv~~l~~~~~~l~~~R~~~gG~~~~ti~~~~~~p~viTVr~~ 158 (320)
T 1o97_D 79 VSALIAAHNPSVVLLPHSVDSLGYASSLASKTGYGFATDVYIVEYQGDELVATRGGYNQKVNVEVDFPGKSTVVLTIRPS 158 (320)
T ss_dssp HHHHHHHHCCSEEEEECSHHHHTTHHHHHHTSSCEEEEEECEEEEETTEEEEEEEETTTTEEEEEECTTCSCEEEEECTT
T ss_pred HHHHHHhcCCCEEEEeCCCchhhHHHHHHHHhCCCccccEEEEEecCCeEEEEEEcCCCEEEEEEEecCCCCEEEEEcCC
Confidence 999976 6899999999999999999999999999999999986 45 79999999999999999876 999999999
Q ss_pred CCcccccCCCcceEEEeeccccCCCCceEEEEEEecc-CCCCCCCCCcEEEEeCccCCCccchHHHHHHHHHhCCeeeec
Q psy9406 151 NFISAKKEGNKAIIHIISKINYFSNTASIFISRELIK-SKRPELTSAKIVVAGGRGLGSSKNFKILEGLADKLNAAIGAS 229 (312)
Q Consensus 151 ~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~A~vvV~~GrG~~~~e~~~~~~~LA~~lga~vg~S 229 (312)
.|+|.+ ++++++++.++.+ ......+++....++ +++++|++|++|||+|||++++|||+++++||++|||++|||
T Consensus 159 ~f~~~~-~~~~~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~A~ivVsgGRG~~~~e~f~~~~~LA~~Lga~vgaS 235 (320)
T 1o97_D 159 VFKPLE-GAGSPVVSNVDAP--SVQSRSQNKDYVEVGGGNDIDITTVDFIMSIGRGIGEETNVEQFRELADEAGATLCCS 235 (320)
T ss_dssp SSCCCC-SBCCCEEEEEECC--CCCCSEEEEEEECCC---CCCCSCSSEEEEECGGGCSGGGHHHHHHHHHHHTCEEEEC
T ss_pred CCCCCC-CCCCcceEEeccC--CCcCceEEEEEEeccccCCcCcCCCCEEEEcCCccCChHHHHHHHHHHHHhCCceeec
Confidence 999763 4556778877653 222346644444333 678999999999999999999999999999999999999999
Q ss_pred HhhHhcCCCCCCeEeccCCceeCC-ceEEEEeeccchhhhcccCCCcEEEEEcCCCCCCcccccceEEeecHhHHHHHHH
Q psy9406 230 RAAVDAGYISNNLQIGQTGKIVAP-QLYIAIGISGAIQHLSGMKDSKIIVAINQDEDAPIFDISDYGLVGDLFEIIPKFI 308 (312)
Q Consensus 230 Rp~vd~gw~~~~~qIG~sG~~v~P-~lYia~GISGa~qH~~G~~~s~~IvAIN~D~~ApIf~~aDygiVgD~~~vlp~l~ 308 (312)
||+||+||+|+++|||||||+|+| +||||||||||+||++||++||+||||||||+||||++||||||||+|+|+|+|+
T Consensus 236 R~~vd~Gw~~~~~QVGqTGk~V~P~~lYiA~GISGAiQHlaGm~~s~~IVAIN~D~~ApIF~~ADygiVgDl~~vvP~L~ 315 (320)
T 1o97_D 236 RPIADAGWLPKSRQVGQSGKVVGSCKLYVAMGISGSIQHMAGMKHVPTIIAVNTDPGASIFTIAKYGIVADIFDIEEELK 315 (320)
T ss_dssp HHHHHTTSSCGGGBBSTTSBCCTTCSEEEEESCCCCHHHHHHHTTCSEEEEECSCTTCGGGGTCSEEECSCHHHHHHHHH
T ss_pred HHHHhCCCCChhhEeecCceEecccceEEEEeccCcHHHHhhcccCCEEEEEeCCCCCCcccccCeEEeeeHHHHHHHHH
Confidence 999999999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred hhhC
Q psy9406 309 KYLN 312 (312)
Q Consensus 309 ~~l~ 312 (312)
++||
T Consensus 316 ~~l~ 319 (320)
T 1o97_D 316 AQLA 319 (320)
T ss_dssp HHC-
T ss_pred HHHh
Confidence 9986
No 4
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=8.8e-38 Score=278.90 Aligned_cols=183 Identities=15% Similarity=0.145 Sum_probs=160.9
Q ss_pred CC-EEEEEEeCCCccChHHHHHHHHHHhc----CCcEEEEEEcCCchHHHHHHhhcCCccEEEEecCCCCCCCCHHHHHH
Q psy9406 1 MP-ALVIAEHDNSYLKTSTLNTITAATLC----SDEIHILIIGYNIEKVILDAKKVNNIKKILLVDSLYFSNNLPENIAA 75 (312)
Q Consensus 1 m~-ilv~~E~~~g~l~~~slEll~~A~~L----g~~V~av~~G~~~~~~a~~~~~~~Gad~V~~~~~~~l~~~~~e~~a~ 75 (312)
|+ ||||+||++|+++++++|||++|++| +++|+++++|++.++.++++.+ +|+|+||+++++.|++|+++.|++
T Consensus 3 m~~ilV~~E~~~g~l~~~s~ell~~A~~La~~~g~~v~av~~G~~~~~~~~~~~~-~Gad~v~~v~~~~~~~~~~~~~a~ 81 (217)
T 3ih5_A 3 ANNLFVYCEIEEGIVADVSLELLTKGRSLANELNCQLEAVVAGTGLKEIEKQILP-YGVDKLHVFDAEGLYPYTSLPHTS 81 (217)
T ss_dssp CCCEEEECCEETTEECHHHHHHHHHHHHHHHHHTCCEEEEEEESCCTTTHHHHGG-GTCSEEEEEECGGGSSCCHHHHHH
T ss_pred cccEEEEEECcCCEECHHHHHHHHHHHHHHHhcCCeEEEEEECCCHHHHHHHHHh-cCCCEEEEecCcccccCCHHHHHH
Confidence 54 99999999999999999999999998 6799999999887777888887 899999999999999999999999
Q ss_pred HHHHHHh--CCcEEEEcCCCCcccHHHHHHHHcCCceeeeEEEeeCC--------------CeEEEEccCceEEEEEEEC
Q psy9406 76 QISVIAS--NYSHILAPATIYGKNILPRVAALLNVMQISEITKVCNP--------------STFERPIYSGRIIATVQST 139 (312)
Q Consensus 76 ~l~~l~~--~~~~IL~~aT~~GrdLaprlAarL~~~lvadv~~l~~~--------------~~~~R~~ygG~~~a~i~~~ 139 (312)
+|.++++ +|++||+|+|.+||+++||||++|++|+++||++|+.+ ..++||+|||+++++++++
T Consensus 82 ~l~~~i~~~~p~~Vl~g~t~~G~~laprlAa~L~~~~~sdv~~l~~~~~~~~~~~~~~~~~l~~~Rp~~gG~~~ati~~~ 161 (217)
T 3ih5_A 82 ILVNLFKEEQPQICLMGATVIGRDLGPRVSSALTSGLTADCTSLEIGDHEDKKEGKVYKNLLYQIRPAFGGNIVATIVNP 161 (217)
T ss_dssp HHHHHHHHHCCSEEEEECSHHHHHHHHHHHHHTTCCCBCSCSEEEEEEEEETTTTEEEEEEEEEEEESSSSSCEEEECCS
T ss_pred HHHHHHHhcCCCEEEEeCCcchhhHHHHHHHHhCCCccceEEEEEecCCccccccccccccEEEEEECCCCEEEEEEEec
Confidence 9999987 68999999999999999999999999999999999843 2789999999999999998
Q ss_pred C-CeEEEEEcCCCCcccccC-CCcceEEEeeccc--cCCCCceEEEEEE
Q psy9406 140 D-IIKVITVRATNFISAKKE-GNKAIIHIISKIN--YFSNTASIFISRE 184 (312)
Q Consensus 140 ~-~p~v~Tvr~g~f~~~~~~-~~~~~v~~~~~~~--~~~~~~~~~~~~~ 184 (312)
+ +|+|+|+||++|++.+.+ +++++|+.+++++ ...+.+++++++.
T Consensus 162 ~~~p~v~TVr~~~f~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~v~~~~ 210 (217)
T 3ih5_A 162 EHRPQMATVREGVMKKEIVSPAYQGEVIRHDVKKYVADTDYVVKVIERH 210 (217)
T ss_dssp SSSSEEEEECTTSSCCCCSCTTCCCEEEECCHHHHHTTSCCCCCCC---
T ss_pred CCCCEEEEECCCCCCcCcCCCCCCccEEEecccccCCchhcceEEEEEE
Confidence 6 899999999999987754 3578899888753 3445567777654
No 5
>3fet_A Electron transfer flavoprotein subunit alpha RELA protein; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: MSE; 2.05A {Thermoplasma acidophilum}
Probab=99.97 E-value=8e-30 Score=218.39 Aligned_cols=159 Identities=18% Similarity=0.137 Sum_probs=134.3
Q ss_pred CCEEEEEEeCCCccChHHHHHHHHHHhcCCcEEEEEEcCCchHHHHHHhhcCCccEEEEecCCCCCCCCHHHHHHHHHHH
Q psy9406 1 MPALVIAEHDNSYLKTSTLNTITAATLCSDEIHILIIGYNIEKVILDAKKVNNIKKILLVDSLYFSNNLPENIAAQISVI 80 (312)
Q Consensus 1 m~ilv~~E~~~g~l~~~slEll~~A~~Lg~~V~av~~G~~~~~~a~~~~~~~Gad~V~~~~~~~l~~~~~e~~a~~l~~l 80 (312)
|+||||+||++ .++||++.|| -+++|+++++|++.. . .+|+|+||++++ ++ +++.|+++|.++
T Consensus 4 M~vlV~~E~~~-----~~~Ell~~ar-~~g~v~av~~G~~~~------~-~~Gad~v~~v~~---~~-~~e~~a~~l~~~ 66 (166)
T 3fet_A 4 MKFLTVSDDMN-----FLRQVNTLVA-GKGDMDSVIIGEGDA------K-GLGSKVLYRAKK---GT-PFDAVSEGILKI 66 (166)
T ss_dssp EEEEEEESSHH-----HHHHHHHHHG-GGEEEEEEEESCCCC------T-TCCCSEEEEECT---TC-CHHHHHHHHHHH
T ss_pred cEEEEEEcCcc-----HHHHHHHhhc-cCCcEEEEEECcchH------H-HcCCCEEEEeCC---CC-ChHHHHHHHHHH
Confidence 89999999863 7999999999 335999999997531 2 259999999984 34 899999999999
Q ss_pred HhCCcEEEEcCCCCcccHHHHHHHHcCCceeeeEEEeeCC-C--eEEEEccCceEEEEEEECCCeEEEEEcCCCCccccc
Q psy9406 81 ASNYSHILAPATIYGKNILPRVAALLNVMQISEITKVCNP-S--TFERPIYSGRIIATVQSTDIIKVITVRATNFISAKK 157 (312)
Q Consensus 81 ~~~~~~IL~~aT~~GrdLaprlAarL~~~lvadv~~l~~~-~--~~~R~~ygG~~~a~i~~~~~p~v~Tvr~g~f~~~~~ 157 (312)
+++|++||+|+|..||+++||+|++|++|+++||++++.+ + .++||+|||+.+++++++. | |+|+||+.|++. .
T Consensus 67 ~~~p~~Vl~g~t~~g~~vaprlAa~L~~~~~sdv~~l~~~~~~~~~~R~~~gG~~~~tv~~~~-p-v~Tvr~~~f~~~-~ 143 (166)
T 3fet_A 67 AGNYDYIAIGSTEVGREIAGYLSFKTGFYTATEIFSLEFNGQKAHTKRFFYGGKTVIEEESDA-R-ILTVAPGVIEAK-D 143 (166)
T ss_dssp HTTCSEEEEECSHHHHHHHHHHHHHHCCCEEEEEEEEEESSSSEEEEEEEGGGTEEEEEEECC-C-EEEECTTSSCCC-C
T ss_pred HcCCCEEEEcCCCccccHHHHHHHHhCCCceeeEEEEEecCCEEEEEEEccCCEEEEEEEeCC-C-EEEECCCCCCCC-C
Confidence 9999999999999999999999999999999999999865 3 5699999999999999985 5 999999999954 3
Q ss_pred CCCcceEEEeeccccCCCCceEEEEE
Q psy9406 158 EGNKAIIHIISKINYFSNTASIFISR 183 (312)
Q Consensus 158 ~~~~~~v~~~~~~~~~~~~~~~~~~~ 183 (312)
.+++++++.++.+ +.+++++++
T Consensus 144 ~~~~~~v~~~~~~----~~~v~~~~~ 165 (166)
T 3fet_A 144 LGTTPEIRDLEIG----QSRIKITKF 165 (166)
T ss_dssp CSCCCEEEECCCC----CCCCEEEEC
T ss_pred CCCCcceEEEccC----CCeEEEEec
Confidence 4557888877652 456776653
No 6
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=99.90 E-value=4e-23 Score=189.13 Aligned_cols=141 Identities=11% Similarity=0.057 Sum_probs=126.3
Q ss_pred ccChHHHHHHHHHHhc----CC--cEEEEEEcCC-chHHHHHHhhcCCccEEEEecCCCCCCCCHHHHHHHHHHHHh--C
Q psy9406 13 YLKTSTLNTITAATLC----SD--EIHILIIGYN-IEKVILDAKKVNNIKKILLVDSLYFSNNLPENIAAQISVIAS--N 83 (312)
Q Consensus 13 ~l~~~slEll~~A~~L----g~--~V~av~~G~~-~~~~a~~~~~~~Gad~V~~~~~~~l~~~~~e~~a~~l~~l~~--~ 83 (312)
.+++.+++++++|++| ++ +|+++++|+. .++.++++.+ +|+|++|+++++.|.+|+++.|+++|+++++ +
T Consensus 34 ~lnp~d~~ale~A~~Lke~~g~~~~V~av~~G~~~~~~~lr~ala-~GaD~vi~v~d~~~~~~~~~~~a~~La~~i~~~~ 112 (264)
T 1o97_C 34 DLNEWDDFSLEEAMKIKESSDTDVEVVVVSVGPDRVDESLRKCLA-KGADRAVRVWDDAAEGSDAIVVGRILTEVIKKEA 112 (264)
T ss_dssp EECHHHHHHHHHHHHHHHHCSSCCEEEEEEESCGGGHHHHHHHHH-TTCSEEEEECCGGGTTCCHHHHHHHHHHHHHHHC
T ss_pred ccCHHHHHHHHHHHHHHHhcCCCceEEEEEeCchhHHHHHHHHHh-cCCCEEEEEcCcccccCCHHHHHHHHHHHHHhcC
Confidence 6899999999999999 45 8999999975 4666777776 8999999999999999999999999999976 6
Q ss_pred CcEEEEcCCCCc---ccHHHHHHHHcCCceeeeEEEeeC--CC---eEEEEccCceEEEEEEECCCeEEEEEcCCCCccc
Q psy9406 84 YSHILAPATIYG---KNILPRVAALLNVMQISEITKVCN--PS---TFERPIYSGRIIATVQSTDIIKVITVRATNFISA 155 (312)
Q Consensus 84 ~~~IL~~aT~~G---rdLaprlAarL~~~lvadv~~l~~--~~---~~~R~~ygG~~~a~i~~~~~p~v~Tvr~g~f~~~ 155 (312)
|++||+|+|+.| ++++||||++|++|+++||++++. ++ .++|++|||+ +.+++++ .|+|+|++++.|+|.
T Consensus 113 ~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~l~~~~~~~~~~~~R~i~gG~-~~~v~~~-~P~vvTv~~~~~~pR 190 (264)
T 1o97_C 113 PDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVADLQYKPGDNKAVIRRELEGGM-LQEVEIN-CPAVLTIQLGINKPR 190 (264)
T ss_dssp CSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEEEECCTTCSEEEEEEECGGGC-EEEEEEE-SSCEEEECTTSSCCT
T ss_pred CCEEEEcCCccCCchhhHHHHHHHHhCCCcccceEEEEEecCCCeEEEEEEcCCCc-EEEEEEC-CCEEEEEeCCCCCcC
Confidence 899999999965 789999999999999999999987 54 7899999999 7888886 668999999999875
Q ss_pred c
Q psy9406 156 K 156 (312)
Q Consensus 156 ~ 156 (312)
-
T Consensus 191 ~ 191 (264)
T 1o97_C 191 Y 191 (264)
T ss_dssp T
T ss_pred C
Confidence 4
No 7
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=99.88 E-value=5.7e-22 Score=180.29 Aligned_cols=169 Identities=15% Similarity=0.072 Sum_probs=135.2
Q ss_pred ccChHHHHHHHHHHhcC---C--cEEEEEEcCC-chHHHHHHhhcCCccEEEEec-CCCC-CCCCHHHHHHHHHHHHh--
Q psy9406 13 YLKTSTLNTITAATLCS---D--EIHILIIGYN-IEKVILDAKKVNNIKKILLVD-SLYF-SNNLPENIAAQISVIAS-- 82 (312)
Q Consensus 13 ~l~~~slEll~~A~~Lg---~--~V~av~~G~~-~~~~a~~~~~~~Gad~V~~~~-~~~l-~~~~~e~~a~~l~~l~~-- 82 (312)
.++|.+++++++|++|+ + +|+++++|+. .++.++++.+ +|+|++|+++ ++.| ++|+++.++++|+++++
T Consensus 34 ~lnp~d~~Ale~A~~Lke~g~~~~V~av~~G~~~a~~~lr~ala-~GaD~vi~v~~d~~~~~~~~~~~~a~~La~~i~~~ 112 (252)
T 1efp_B 34 SMNPFDEIAVEEAIRLKEKGQAEEIIAVSIGVKQAAETLRTALA-MGADRAILVVAADDVQQDIEPLAVAKILAAVARAE 112 (252)
T ss_dssp EECHHHHHHHHHHHHHHTTTSCSEEEEEEEESGGGHHHHHHHHH-HTCSEEEEEECCSSTTCCCCHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhcCCCceEEEEEeCChhHHHHHHHHHh-cCCCEEEEEecChhhcccCCHHHHHHHHHHHHHhc
Confidence 48999999999999993 5 8999999985 4666777776 7999999999 9999 89999999999999976
Q ss_pred CCcEEEEcCCCCc---ccHHHHHHHHcCCceeeeEEEeeCCC---eEEEEccCceEEEEEEECCCeEEEEEcCCCCcccc
Q psy9406 83 NYSHILAPATIYG---KNILPRVAALLNVMQISEITKVCNPS---TFERPIYSGRIIATVQSTDIIKVITVRATNFISAK 156 (312)
Q Consensus 83 ~~~~IL~~aT~~G---rdLaprlAarL~~~lvadv~~l~~~~---~~~R~~ygG~~~a~i~~~~~p~v~Tvr~g~f~~~~ 156 (312)
+|++||+|+++.| ++++||+|++||+|+++||++++.++ .++|++||| +.+++++ .|+|+|++++.|+|.-
T Consensus 113 ~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~l~~~~~~~~v~R~i~gG--~~~v~~~-~P~vvTv~~~~~~pR~ 189 (252)
T 1efp_B 113 GTELIIAGKQAIDNDMNATGQMLAAILGWAQATFASKVEIEGAKAKVTREVDGG--LQTIAVS-LPAVVTADLRLNEPRY 189 (252)
T ss_dssp TCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEEEEEECSSEEEEEEEETTE--EEEEEEE-SSEEEEECTTSCCCCC
T ss_pred CCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEEEEEEcCCeEEEEEEcCCc--EEEEEEC-CCEEEEEeCCCCCcCC
Confidence 5899999999965 88999999999999999999998654 789999999 4566665 6689999999998753
Q ss_pred cC------CCcceEEEeecc-cc-CCCCceEEEEEEe
Q psy9406 157 KE------GNKAIIHIISKI-NY-FSNTASIFISREL 185 (312)
Q Consensus 157 ~~------~~~~~v~~~~~~-~~-~~~~~~~~~~~~~ 185 (312)
+. ....+++.+... +. .....+++++...
T Consensus 190 ~sl~~im~A~kk~i~~~~~~dl~~~~~~~~~v~~~~~ 226 (252)
T 1efp_B 190 ASLPNIMKAKKKPLDEKTAADYGVDVAPRLEVVSVRE 226 (252)
T ss_dssp CCHHHHHHHTTSCEEEEEGGGGTCCCCCSEEEEEEEC
T ss_pred CCHHHHHhhccCCeeEecHHHcCCCCCCCcEEEEEec
Confidence 21 123366666542 11 1124466665543
No 8
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=99.88 E-value=1.1e-21 Score=178.58 Aligned_cols=170 Identities=16% Similarity=0.041 Sum_probs=135.7
Q ss_pred ccChHHHHHHHHHHhcC---C--cEEEEEEcCC-chHHHHHHhhcCCccEEEEec-CCCC-CCCCHHHHHHHHHHHHh--
Q psy9406 13 YLKTSTLNTITAATLCS---D--EIHILIIGYN-IEKVILDAKKVNNIKKILLVD-SLYF-SNNLPENIAAQISVIAS-- 82 (312)
Q Consensus 13 ~l~~~slEll~~A~~Lg---~--~V~av~~G~~-~~~~a~~~~~~~Gad~V~~~~-~~~l-~~~~~e~~a~~l~~l~~-- 82 (312)
.++|.+++++++|++|+ + +|+++++|+. .++.++++.+ +|+|++|+++ ++.| .+|+++.++++|+++++
T Consensus 37 ~lnp~d~~Ale~A~~Lke~g~~~~V~av~~G~~~a~~~lr~ala-~GaD~vi~v~~d~~~~~~~~~~~~A~~La~~i~~~ 115 (255)
T 1efv_B 37 SMNPFCEIAVEEAVRLKEKKLVKEVIAVSCGPAQCQETIRTALA-MGADRGIHVEVPPAEAERLGPLQVARVLAKLAEKE 115 (255)
T ss_dssp EECHHHHHHHHHHHHHHHTTSCSEEEEEEEESTTHHHHHHHHHH-HTCSEEEEEECCHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhcCCCceEEEEEeCChhHHHHHHHHHh-cCCCEEEEEecChhhcccCCHHHHHHHHHHHHHhc
Confidence 48899999999999993 5 8999999985 4566777776 7999999999 8888 88999999999999976
Q ss_pred CCcEEEEcCCCCc---ccHHHHHHHHcCCceeeeEEEeeCCC---eEEEEccCceEEEEEEECCCeEEEEEcCCCCcccc
Q psy9406 83 NYSHILAPATIYG---KNILPRVAALLNVMQISEITKVCNPS---TFERPIYSGRIIATVQSTDIIKVITVRATNFISAK 156 (312)
Q Consensus 83 ~~~~IL~~aT~~G---rdLaprlAarL~~~lvadv~~l~~~~---~~~R~~ygG~~~a~i~~~~~p~v~Tvr~g~f~~~~ 156 (312)
+||+||+|+++.| ++++||+|++||+|++|||++++.++ .++|++||| +.+++++ .|+|+|++++.|+|.-
T Consensus 116 ~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~~l~~~~~~~~v~R~i~gG--~~~v~~~-~P~VvTv~~~~~~pR~ 192 (255)
T 1efv_B 116 KVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQVTLEGDKLKVEREIDGG--LETLRLK-LPAVVTADLRLNEPRY 192 (255)
T ss_dssp TCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEEEEEETTEEEEEEEETTE--EEEEEEE-SSEEEEECGGGCCCCC
T ss_pred CCCEEEEeCcccCCchhhHHHHHHHHhCCCcccceEEEEEcCCeEEEEEEcCCc--EEEEEEC-CCEEEEEeCCCCCcCC
Confidence 5899999999965 88999999999999999999998654 789999999 4566665 6689999999998753
Q ss_pred cC------CCcceEEEeecc-c-cCCCCceEEEEEEec
Q psy9406 157 KE------GNKAIIHIISKI-N-YFSNTASIFISRELI 186 (312)
Q Consensus 157 ~~------~~~~~v~~~~~~-~-~~~~~~~~~~~~~~~ 186 (312)
+. ....+++.+... + ......+++++...+
T Consensus 193 ~sl~~im~A~kk~i~~~~~~dl~~~~~~~~~v~~~~~p 230 (255)
T 1efv_B 193 ATLPNIMKAKKKKIEVIKPGDLGVDLTSKLSVISVEDP 230 (255)
T ss_dssp CCHHHHHHTTTSCEEEECHHHHTCCCCCSEEEEEEECC
T ss_pred CCHHHHHHhccCCeeEecHHHcCCCCCCCeEEEEEecC
Confidence 21 223467665532 1 112345666665533
No 9
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=96.34 E-value=0.03 Score=55.60 Aligned_cols=111 Identities=19% Similarity=0.190 Sum_probs=77.9
Q ss_pred cEEEEeCccCCCccchHHHHHHHHHhCCeeeecHhhHhcCCCCC--C-eEeccCCce--------e-CCceEEEEee---
Q psy9406 197 KIVVAGGRGLGSSKNFKILEGLADKLNAAIGASRAAVDAGYISN--N-LQIGQTGKI--------V-APQLYIAIGI--- 261 (312)
Q Consensus 197 ~vvV~~GrG~~~~e~~~~~~~LA~~lga~vg~SRp~vd~gw~~~--~-~qIG~sG~~--------v-~P~lYia~GI--- 261 (312)
+-++-+|.|....+..+.+.+||+++|.-|-+|-. -.|.+|. . ..+|..|.. + .+++-|++|-
T Consensus 209 rpvil~G~g~~~~~a~~~l~~lae~~~~Pv~~t~~--~kg~~~~~~p~~~~G~~g~~~~~~~~~~l~~aDlvl~lG~~~~ 286 (566)
T 1ozh_A 209 NPIFLLGLMASQPENSKALRRLLETSHIPVTSTYQ--AAGAVNQDNFSRFAGRVGLFNNQAGDRLLQLADLVICIGYSPV 286 (566)
T ss_dssp SEEEEECGGGGSGGGHHHHHHHHHHHCCCEEECGG--GTTTCCTTTCTTEEEECSSBTTCHHHHHHHHCSEEEEESCCGG
T ss_pred CeEEEECCCcccccHHHHHHHHHHHHCCCEEEccc--cCCcCCCCChHhhcCCCcccCCHHHHHHHHhCCEEEEECCCCC
Confidence 35666677877667788999999999999987633 4566654 3 567665532 2 3599999995
Q ss_pred ccchhhhcccCCCcEEEEEcCCCCCC-cccccceEEeecHhHHHHHHHhhh
Q psy9406 262 SGAIQHLSGMKDSKIIVAINQDEDAP-IFDISDYGLVGDLFEIIPKFIKYL 311 (312)
Q Consensus 262 SGa~qH~~G~~~s~~IvAIN~D~~Ap-If~~aDygiVgD~~~vlp~l~~~l 311 (312)
++...... .....+|-||.|+.-. =+...|+.|++|+.++|.+|.+.+
T Consensus 287 ~~~~~~~~--~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l 335 (566)
T 1ozh_A 287 EYEPAMWN--SGNATLVHIDVLPAYEERNYTPDVELVGDIAGTLNKLAQNI 335 (566)
T ss_dssp GSCGGGTC--CSCSEEEEEESSCCCCBTTBCCSEEEESCHHHHHHHHHHTC
T ss_pred cCCccccC--CCCCcEEEEeCCHHHhCCCCCCCEEEEeCHHHHHHHHHHhc
Confidence 44332222 2234678899998532 133579999999999999998765
No 10
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=95.70 E-value=0.07 Score=53.40 Aligned_cols=114 Identities=15% Similarity=0.245 Sum_probs=77.2
Q ss_pred CCCc-EEEEeCccCCCccchHHHHHHHHHhCCeeeecHhhHhcCCCCC--CeEeccCCce---------eCCceEEEEee
Q psy9406 194 TSAK-IVVAGGRGLGSSKNFKILEGLADKLNAAIGASRAAVDAGYISN--NLQIGQTGKI---------VAPQLYIAIGI 261 (312)
Q Consensus 194 ~~A~-vvV~~GrG~~~~e~~~~~~~LA~~lga~vg~SRp~vd~gw~~~--~~qIG~sG~~---------v~P~lYia~GI 261 (312)
.+|+ -+|-+|.|. .+..+.+.+||+++|.-|-+|-. -.|.+|. ...+|..|.. =.++|-|++|-
T Consensus 210 ~~A~rPvIl~G~g~--~~a~~~l~~lae~~~~PV~~t~~--gkg~~~~~hp~~~G~~g~~~~~~~~~~l~~aDlvl~iG~ 285 (603)
T 4feg_A 210 LAAERPLIYYGIGA--RKAGKELEQLSKTLKIPLMSTYP--AKGIVADRYPAYLGSANRVAQKPANEALAQADVVLFVGN 285 (603)
T ss_dssp HHCSSEEEEECGGG--TTCHHHHHHHHHHHTCCEEECGG--GTTSSCTTCTTBCCCCSSSSCHHHHHHHHHCSEEEEESC
T ss_pred hcCCCeEEEECCCc--hhHHHHHHHHHHHHCCCEEEcCc--cccCCCCCChhhcccCcccCcHHHHHHHHhCCEEEEECC
Confidence 3443 445556676 35678999999999999988843 3466654 3567776642 24899999997
Q ss_pred ccch-hhhcccCCCcEEEEEcCCCCCC-cccccceEEeecHhHHHHHHHhhh
Q psy9406 262 SGAI-QHLSGMKDSKIIVAINQDEDAP-IFDISDYGLVGDLFEIIPKFIKYL 311 (312)
Q Consensus 262 SGa~-qH~~G~~~s~~IvAIN~D~~Ap-If~~aDygiVgD~~~vlp~l~~~l 311 (312)
.=.. +++.-......+|-||.||.-- =....|++|++|+.++|.+|++++
T Consensus 286 ~~~~~~~~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~D~~~~l~~L~~~l 337 (603)
T 4feg_A 286 NYPFAEVSKAFKNTRYFLQIDIDPAKLGKRHKTDIAVLADAQKTLAAILAQV 337 (603)
T ss_dssp CCTTTTTTTTTTTCSEEEEEESCGGGTTSSSCCSEEEESCHHHHHHHHHHTC
T ss_pred CCCcccccccCCCCCeEEEEeCCHHHhCCccCCCEEEEeCHHHHHHHHHHhh
Confidence 4221 2222233345688899887531 123579999999999999999875
No 11
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=95.65 E-value=0.043 Score=54.68 Aligned_cols=112 Identities=14% Similarity=0.060 Sum_probs=72.8
Q ss_pred cEEEEeCccCCCccchHHHHHHHHHhCCeeeecHhhHhcCCCC--CCeEeccCCce---------eCCceEEEEeec---
Q psy9406 197 KIVVAGGRGLGSSKNFKILEGLADKLNAAIGASRAAVDAGYIS--NNLQIGQTGKI---------VAPQLYIAIGIS--- 262 (312)
Q Consensus 197 ~vvV~~GrG~~~~e~~~~~~~LA~~lga~vg~SRp~vd~gw~~--~~~qIG~sG~~---------v~P~lYia~GIS--- 262 (312)
+-+|-+|.|... ...+.+.+||+++|.-|-+|-- -..|..| +...+|..|.. -.++|-|.+|-.
T Consensus 225 rPvIl~G~g~~~-~~~~~l~~lae~~~~PV~~t~~-~~~~~~~~~hp~~~g~~~~~~~~~~~~~~~~aDlvl~~G~~~~~ 302 (578)
T 3lq1_A 225 KGVFVVGPIDKK-ELEQPMVDLAKKLGWPILADPL-SGLRSYGALDEVVIDQYDAFLKEAEIIDKLTPEVVIRFGSMPVS 302 (578)
T ss_dssp CEEEEECSCCCT-TCHHHHHHHHHHHTCCEEECGG-GSTTSBSSCCSSEECCHHHHTTSHHHHHHTCCSEEEEESSCCSC
T ss_pred CeEEEECCCCCh-HHHHHHHHHHHhcCcEEEEecC-CCCCCCCCCCccccccHHHHhcCccccccCCCCEEEEeCCcccc
Confidence 445555667654 3457899999999998887511 1122223 34567765432 269999999963
Q ss_pred cch-hhhcccCCCcEEEEEcCCCCCC-cccccceEEeecHhHHHHHHHhhh
Q psy9406 263 GAI-QHLSGMKDSKIIVAINQDEDAP-IFDISDYGLVGDLFEIIPKFIKYL 311 (312)
Q Consensus 263 Ga~-qH~~G~~~s~~IvAIN~D~~Ap-If~~aDygiVgD~~~vlp~l~~~l 311 (312)
... ++..-.. ...+|-||.|+.-. =+...|++|++|+.++|.+|++.+
T Consensus 303 ~~~~~~~~~~~-~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l 352 (578)
T 3lq1_A 303 KPLKNWLEQLS-DIRFYVVDPGAAWKDPIKAVTDMIHCDERFLLDIMQQNM 352 (578)
T ss_dssp HHHHHHHHHCC-SSEEEEECTTCCCCCTTCCCSEEECSCHHHHHHHHHHHS
T ss_pred hhHHHHHhcCC-CCEEEEECCCCCcCCCCcCceEEEEeCHHHHHHHHHhhc
Confidence 222 2222222 34678899998521 134579999999999999998865
No 12
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=95.58 E-value=0.086 Score=52.54 Aligned_cols=108 Identities=19% Similarity=0.233 Sum_probs=74.6
Q ss_pred cEEEEeCccCCCccchHHHHHHHHHhCCeeeecHhhHhcCCCCC--CeEeccCCce---------eCCceEEEEeec---
Q psy9406 197 KIVVAGGRGLGSSKNFKILEGLADKLNAAIGASRAAVDAGYISN--NLQIGQTGKI---------VAPQLYIAIGIS--- 262 (312)
Q Consensus 197 ~vvV~~GrG~~~~e~~~~~~~LA~~lga~vg~SRp~vd~gw~~~--~~qIG~sG~~---------v~P~lYia~GIS--- 262 (312)
+-++-+|.|....+ +.+.+||+.+|.-|-+|-. -.|.+|. ...+|..|.. -.++|-|++|-.
T Consensus 216 rpvIl~G~g~~~~~--~~l~~lae~~~~Pv~~t~~--g~g~~~~~hp~~~G~~g~~~~~~~~~~l~~aDlvl~iG~~~~~ 291 (590)
T 1ybh_A 216 KPVLYVGGGCLNSS--DELGRFVELTGIPVASTLM--GLGSYPADDELSLHMLGMHGTVYANYAVEHSDLLLAFGVRFDD 291 (590)
T ss_dssp SEEEEECGGGTTCH--HHHHHHHHHHCCCEEECTT--TTTSSCTTSTTEEEECSTTSCHHHHHHHHHCSEEEEESCCCCH
T ss_pred CcEEEECcccccCH--HHHHHHHHHhCCCEEEchh--hcCcCCCCCchhcCCcccccCHHHHHHHHhCCEEEEEcCCCCc
Confidence 34555566766544 8999999999999988722 4566654 3567776532 247999999963
Q ss_pred ---cchhhhcccCCCcEEEEEcCCCCC-CcccccceEEeecHhHHHHHHHhhh
Q psy9406 263 ---GAIQHLSGMKDSKIIVAINQDEDA-PIFDISDYGLVGDLFEIIPKFIKYL 311 (312)
Q Consensus 263 ---Ga~qH~~G~~~s~~IvAIN~D~~A-pIf~~aDygiVgD~~~vlp~l~~~l 311 (312)
|.... ......+|-||.|+.- --+...|+.|++|+.++|.+|.+.+
T Consensus 292 ~~~~~~~~---~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l 341 (590)
T 1ybh_A 292 RVTGKLEA---FASRAKIVHIDIDSAEIGKNKTPHVSVCGDVKLALQGMNKVL 341 (590)
T ss_dssp HHHSSGGG---TTTTSEEEEEESCTTTTTSSSCCSEEEESCHHHHHHHHHHHH
T ss_pred cccCcccc---cCCCCeEEEEECCHHHhCCCcCCCeEEecCHHHHHHHHHHhh
Confidence 32221 2223457889999853 1233679999999999999998765
No 13
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=95.50 E-value=0.03 Score=55.90 Aligned_cols=113 Identities=19% Similarity=0.268 Sum_probs=76.4
Q ss_pred cEEEEeCccCCCccchHHHHHHHHHhCCeeeecHhhHhcCCCCC--CeEeccCCce---------eCCceEEEEeeccch
Q psy9406 197 KIVVAGGRGLGSSKNFKILEGLADKLNAAIGASRAAVDAGYISN--NLQIGQTGKI---------VAPQLYIAIGISGAI 265 (312)
Q Consensus 197 ~vvV~~GrG~~~~e~~~~~~~LA~~lga~vg~SRp~vd~gw~~~--~~qIG~sG~~---------v~P~lYia~GISGa~ 265 (312)
+-+|-+|.|....+..+.+.+||+.+|.-|-+|- .-.|.+|. ...+|..|.. =.+++-|++|-.=..
T Consensus 207 rpvIl~G~g~~~~~a~~~l~~lae~~~~Pv~~t~--~~~g~~~~~~p~~~G~~g~~~~~~~~~~l~~aDlvl~iG~~~~~ 284 (589)
T 2pgn_A 207 NPVILAGGGVARSGGSEALLKLAEMVGVPVVTTS--TGAGVFPETHALAMGSAGFCGWKSANDMMAAADFVLVLGSRLSD 284 (589)
T ss_dssp SEEEEECHHHHHHTCHHHHHHHHHHHTCCEEECT--TTTTSSCTTSTTEEEECSTTSCHHHHHHHHHCSEEEEESCCCCT
T ss_pred CeEEEECCCcccccHHHHHHHHHHHhCCCEEEcc--ccCccCCCCChhhcCCccccCCHHHHHHHhhCCEEEEECCCccc
Confidence 3566667777655677899999999999998773 34566654 3477776632 247999999963211
Q ss_pred hhh--cccCCCcEEEEEcCCCCC-CcccccceEEeecHhHHHHHHHhhh
Q psy9406 266 QHL--SGMKDSKIIVAINQDEDA-PIFDISDYGLVGDLFEIIPKFIKYL 311 (312)
Q Consensus 266 qH~--~G~~~s~~IvAIN~D~~A-pIf~~aDygiVgD~~~vlp~l~~~l 311 (312)
-++ ........+|-||.|+.- -=+...|+.+++|+.++|.+|.+.+
T Consensus 285 ~~~~~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l 333 (589)
T 2pgn_A 285 WGIAQGYITKMPKFVHVDTDPAVLGTFYFPLLSVVADAKTFMEQLIEVL 333 (589)
T ss_dssp TTTTTTTTCCCCSEEEEESCGGGTTSSSCCSEEEECCHHHHHHHHHHHG
T ss_pred ccccccccCCCCeEEEEeCCHHHHCCCcCCCEEEEeCHHHHHHHHHHHh
Confidence 121 112122357779998842 1233579999999999999998765
No 14
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=95.15 E-value=0.048 Score=54.01 Aligned_cols=113 Identities=12% Similarity=0.154 Sum_probs=77.6
Q ss_pred cEEEEeCccCCCccchHHHHHHHHHhCCeeeecHhhHhcCCCCC--CeEeccCCc-ee-CCceEEEEeeccchhhhcc--
Q psy9406 197 KIVVAGGRGLGSSKNFKILEGLADKLNAAIGASRAAVDAGYISN--NLQIGQTGK-IV-APQLYIAIGISGAIQHLSG-- 270 (312)
Q Consensus 197 ~vvV~~GrG~~~~e~~~~~~~LA~~lga~vg~SRp~vd~gw~~~--~~qIG~sG~-~v-~P~lYia~GISGa~qH~~G-- 270 (312)
+-+|-+|.|....+..+.+.+||+.+|.-|-+|--. .|.+|. ...+|..+. .+ .++|-|++|-.=......|
T Consensus 213 rpvIl~G~g~~~~~a~~~l~~lae~~~~Pv~~t~~~--~g~~~~~hp~~~G~~~~~~l~~aDlvl~iG~~~~~~~~~~~~ 290 (564)
T 2q28_A 213 RPLIILGKGAAYSQADEQLREFIESAQIPFLPMSMA--KGILEDTHPLSAAAARSFALANADVVMLVGARLNWLLAHGKK 290 (564)
T ss_dssp SEEEEECHHHHHHTCHHHHHHHHHHHTCCEEECGGG--TTSSCTTCTTBCGGGHHHHHHHCSEEEEESCCCSGGGGGGTT
T ss_pred CcEEEECcccccccHHHHHHHHHHHhCCCEEeccCc--cccCCCCChhhcChHHHhHhhcCCEEEEECCccccccccccc
Confidence 345666777654566789999999999999887643 455653 457787654 23 6899999996432111112
Q ss_pred -cCCCcEEEEEcCCCCC-CcccccceEEeecHhHHHHHHHhhh
Q psy9406 271 -MKDSKIIVAINQDEDA-PIFDISDYGLVGDLFEIIPKFIKYL 311 (312)
Q Consensus 271 -~~~s~~IvAIN~D~~A-pIf~~aDygiVgD~~~vlp~l~~~l 311 (312)
......||-||.||.- --+...|+.+++|+.++|.+|.+.+
T Consensus 291 ~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l 333 (564)
T 2q28_A 291 GWAADTQFIQLDIEPQEIDSNRPIAVPVVGDIASSMQGMLAEL 333 (564)
T ss_dssp TSCTTCEEEEEESCGGGTTSSSCCSEEEESCHHHHHHHHHHHH
T ss_pred ccCCCCeEEEEeCCHHHhcCCCCCCeEEEcCHHHHHHHHHHHh
Confidence 2223457789998852 1234579999999999999998765
No 15
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=95.03 E-value=0.049 Score=54.01 Aligned_cols=116 Identities=16% Similarity=0.142 Sum_probs=78.8
Q ss_pred CCC-cEEEEeCccCCCccchHHHHHHHHHhCCeeeecHhhHhcCCCCC--CeEeccCCc-ee-CCceEEEEeeccchhhh
Q psy9406 194 TSA-KIVVAGGRGLGSSKNFKILEGLADKLNAAIGASRAAVDAGYISN--NLQIGQTGK-IV-APQLYIAIGISGAIQHL 268 (312)
Q Consensus 194 ~~A-~vvV~~GrG~~~~e~~~~~~~LA~~lga~vg~SRp~vd~gw~~~--~~qIG~sG~-~v-~P~lYia~GISGa~qH~ 268 (312)
.+| +-+|-+|.|....+..+.+.+||+.+|.-|-+|-- -.|.+|+ ...+|..+. .+ .++|-|++|-.=..-..
T Consensus 211 ~~a~rpvIl~G~g~~~~~a~~~l~~lae~~~~Pv~~t~~--~~g~~~~~~p~~~G~~~~~~l~~aDlvl~iG~~~~~~~~ 288 (568)
T 2c31_A 211 KNAKRPVIMLGKGAAYAQCDDEIRALVEETGIPFLPMGM--AKGLLPDNHPQSAAATRAFALAQCDVCVLIGARLNWLMQ 288 (568)
T ss_dssp HTCSSEEEEECHHHHHHTCHHHHHHHHHHHTCCEEECGG--GTTSSCTTCTTBCGGGHHHHHHHCSEEEEESCCCSGGGG
T ss_pred HhCCCCEEEECcccccccHHHHHHHHHHHhCCCEEeccc--ccccCCCCChhhcchHHHhhhccCCEEEEECCCCccccc
Confidence 344 35666677775456678999999999999987764 3455653 457787654 23 68999999974322112
Q ss_pred cc----cC-CCcEEEEEcCCCCCC-cccccceEEeecHhHHHHHHHhhh
Q psy9406 269 SG----MK-DSKIIVAINQDEDAP-IFDISDYGLVGDLFEIIPKFIKYL 311 (312)
Q Consensus 269 ~G----~~-~s~~IvAIN~D~~Ap-If~~aDygiVgD~~~vlp~l~~~l 311 (312)
.| .. ....||-||.||.-. -+...|+++++|+.++|.+|.+.+
T Consensus 289 ~~~~~~~~~~~~~ii~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l 337 (568)
T 2c31_A 289 HGKGKTWGDELKKYVQIDIQANEMDSNQPIAAPVVGDIKSAVSLLRKAL 337 (568)
T ss_dssp GGCSGGGTTSCCEEEEEESCGGGTTSSSCCSEEEESCHHHHHHHHHHHH
T ss_pred cCcccccCCCCCeEEEEeCCHHHhcCCcCCCceeeCCHHHHHHHHHHhh
Confidence 12 22 234577799988531 234579999999999999998865
No 16
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=95.02 E-value=0.063 Score=54.68 Aligned_cols=110 Identities=17% Similarity=0.271 Sum_probs=74.6
Q ss_pred EEEEeCccCC-CccchHHHHHHHHHhCCeeeecHhhHhcCCCCCCe-----EeccCCce------eCCceEEEEeec---
Q psy9406 198 IVVAGGRGLG-SSKNFKILEGLADKLNAAIGASRAAVDAGYISNNL-----QIGQTGKI------VAPQLYIAIGIS--- 262 (312)
Q Consensus 198 vvV~~GrG~~-~~e~~~~~~~LA~~lga~vg~SRp~vd~gw~~~~~-----qIG~sG~~------v~P~lYia~GIS--- 262 (312)
-+|-+|.|+. +.+..+.+.+||+.+|.-|-+| .--.|.+|.++ .+|..|.. =.++|-|++|-.
T Consensus 292 PvIl~G~g~~~~~~~~~~l~~lae~~~~PV~tt--~~gkg~~~~~hpl~lG~~G~~g~~~~~~~l~~aDlvl~iG~r~~~ 369 (677)
T 1t9b_A 292 PVLYVGAGILNHADGPRLLKELSDRAQIPVTTT--LQGLGSFDQEDPKSLDMLGMHGCATANLAVQNADLIIAVGARFDD 369 (677)
T ss_dssp EEEEECGGGGGSTTHHHHHHHHHHHTTCCEEEC--GGGTTSSCTTSTTEEEECSTTSCHHHHHHHHHCSEEEEESCCCCT
T ss_pred eEEEECcccccCchhHHHHHHHHHHhCCCeeec--cccCccCCCCCccccCcCCccCcHHHHHHHhcCCEEEEECCccCc
Confidence 3444466764 3345688999999999999988 45567777754 34444432 258999999964
Q ss_pred ---cchhhhcccCCCc--------EEEEEcCCCCCC-cccccceEEeecHhHHHHHHHhhh
Q psy9406 263 ---GAIQHLSGMKDSK--------IIVAINQDEDAP-IFDISDYGLVGDLFEIIPKFIKYL 311 (312)
Q Consensus 263 ---Ga~qH~~G~~~s~--------~IvAIN~D~~Ap-If~~aDygiVgD~~~vlp~l~~~l 311 (312)
|...... .+++ .||-|+.||+-- -+...|+.|++|+..+|.+|+++|
T Consensus 370 ~~t~~~~~~~--~~~~~~~~~~~~~iI~idid~~~~~~~~~~~~~i~gD~~~~l~~L~~~l 428 (677)
T 1t9b_A 370 RVTGNISKFA--PEARRAAAEGRGGIIHFEVSPKNINKVVQTQIAVEGDATTNLGKMMSKI 428 (677)
T ss_dssp TTSCSGGGSS--HHHHHHHHTTSCEEEEEESCGGGSSSSSCCSEEEESCHHHHHHHHHTTS
T ss_pred ccccCccccC--cccccccccCCceEEEEECCHHHhCCcccCCEEEeCCHHHHHHHHHHHh
Confidence 3322211 1222 278899888631 133579999999999999998865
No 17
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=94.97 E-value=0.052 Score=53.95 Aligned_cols=112 Identities=20% Similarity=0.245 Sum_probs=76.0
Q ss_pred cEEEEeCccCCCccchHHHHHHHHHhCCeeeecHhhHhcCCCCC--CeEeccC-----C---c-----ee-CCceEEEEe
Q psy9406 197 KIVVAGGRGLGSSKNFKILEGLADKLNAAIGASRAAVDAGYISN--NLQIGQT-----G---K-----IV-APQLYIAIG 260 (312)
Q Consensus 197 ~vvV~~GrG~~~~e~~~~~~~LA~~lga~vg~SRp~vd~gw~~~--~~qIG~s-----G---~-----~v-~P~lYia~G 260 (312)
+-++-+|.|....+..+.+.+||+++|.-|-+|- --.|.+|. ...+|.. | . .+ .+++-|.+|
T Consensus 218 rpvIl~G~g~~~~~a~~~l~~lae~~~~Pv~~t~--~~~g~~~~~hp~~~G~~~~~~~g~~~~~~~~~~l~~aDlvl~iG 295 (573)
T 2iht_A 218 HPVLVVGAAAIRSGAVPAIRALAERLNIPVITTY--IAKGVLPVGHELNYGAVTGYMDGILNFPALQTMFAPVDLVLTVG 295 (573)
T ss_dssp SEEEEECHHHHHTTCHHHHHHHHHHHTCCEEECS--TTTTSSCTTCTTEEEECCTTHHHHHTSCHHHHHHTTCCEEEEET
T ss_pred CeEEEECCCccccCHHHHHHHHHHHHCCeEEEec--ccCccCCCCCcCccCccccccCCCCCCHHHHHHHhhCCEEEEEC
Confidence 3566666676655677899999999999998762 23566654 3466654 3 2 12 579999999
Q ss_pred ec--cchhhhccc-C-CCcEEEEEcCCCCCC-cccccceEEeecHhHHHHHHHhhh
Q psy9406 261 IS--GAIQHLSGM-K-DSKIIVAINQDEDAP-IFDISDYGLVGDLFEIIPKFIKYL 311 (312)
Q Consensus 261 IS--Ga~qH~~G~-~-~s~~IvAIN~D~~Ap-If~~aDygiVgD~~~vlp~l~~~l 311 (312)
-. ...+ +... . ....+|-||.|+.-. =+...|+.+++|+.++|++|.+.+
T Consensus 296 ~~~~~~~~-~~~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l 350 (573)
T 2iht_A 296 YDYAEDLR-PSMWQKGIEKKTVRISPTVNPIPRVYRPDVDVVTDVLAFVEHFETAT 350 (573)
T ss_dssp CCGGGCCC-HHHHCCSSCCEEEEEESSCCSCTTTCCCSEEEESCHHHHHHHHHHHT
T ss_pred CCcccccc-ccccCCCCCCeEEEEeCCHHHhCCCcCCCeeEeCCHHHHHHHHHHhc
Confidence 65 2211 1112 1 234678899998531 123579999999999999998865
No 18
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=94.77 E-value=0.064 Score=53.16 Aligned_cols=113 Identities=15% Similarity=0.159 Sum_probs=76.0
Q ss_pred cEEEEeCccCCCccchHHHHHHHHHhCCeeeecHhhHhcCCCC---CCeEeccCC--c-----eeCCceEEEEeeccchh
Q psy9406 197 KIVVAGGRGLGSSKNFKILEGLADKLNAAIGASRAAVDAGYIS---NNLQIGQTG--K-----IVAPQLYIAIGISGAIQ 266 (312)
Q Consensus 197 ~vvV~~GrG~~~~e~~~~~~~LA~~lga~vg~SRp~vd~gw~~---~~~qIG~sG--~-----~v~P~lYia~GISGa~q 266 (312)
+-++-+|.|....+..+.+.+||+.+|+-|-+|-. -.|.+| +...+|..| . .-.+++-|++|-.=...
T Consensus 206 rpvil~G~g~~~~~a~~~l~~lae~~~~Pv~~t~~--~~g~~~~~~~p~~~G~~g~~~~~~~~~~~aDlvl~iG~~~~~~ 283 (563)
T 2uz1_A 206 RPVIVLGSEASRTARKTALSAFVAATGVPVFADYE--GLSMLSGLPDAMRGGLVQNLYSFAKADAAPDLVLMLGARFGLN 283 (563)
T ss_dssp SEEEEECHHHHHHTCHHHHHHHHHHHCCCEEECGG--GGGGGTTSCGGGEEEEGGGGGGTTTTTCCCSEEEEESCCSSGG
T ss_pred CcEEEECCccccccHHHHHHHHHHHhCCcEEEcCc--ccCcCCCCCChhhcCCCCCCCHHHHhhcCCCEEEEECCCCccc
Confidence 35666677776556778999999999999887633 234454 345676654 1 23579999999642222
Q ss_pred hhccc---CC-CcEEEEEcCCCCCC-cccccceEEeecHhHHHHHHHhhh
Q psy9406 267 HLSGM---KD-SKIIVAINQDEDAP-IFDISDYGLVGDLFEIIPKFIKYL 311 (312)
Q Consensus 267 H~~G~---~~-s~~IvAIN~D~~Ap-If~~aDygiVgD~~~vlp~l~~~l 311 (312)
.+... .. ...+|-||.|+.-. -+...|+.+++|+.++|.+|.+.+
T Consensus 284 ~~~~~~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l 333 (563)
T 2uz1_A 284 TGHGSGQLIPHSAQVIQVDPDACELGRLQGIALGIVADVGGTIEALAQAT 333 (563)
T ss_dssp GTTTSCSSSCTTSEEEEECSCGGGTTSSSCCSEEECSCHHHHHHHHHHHH
T ss_pred ccccccccCCCCCeEEEEECCHHHhCCCCCCCeEEEcCHHHHHHHHHHhh
Confidence 22111 11 34678899988421 123579999999999999998765
No 19
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=94.73 E-value=0.11 Score=51.34 Aligned_cols=112 Identities=21% Similarity=0.279 Sum_probs=74.4
Q ss_pred CCCCc-EEEEeCccCCCccchHHHHHHHHHhCCeeeecHh---hHhcCCCCCCeEeccCCce---------eCCceEEEE
Q psy9406 193 LTSAK-IVVAGGRGLGSSKNFKILEGLADKLNAAIGASRA---AVDAGYISNNLQIGQTGKI---------VAPQLYIAI 259 (312)
Q Consensus 193 l~~A~-vvV~~GrG~~~~e~~~~~~~LA~~lga~vg~SRp---~vd~gw~~~~~qIG~sG~~---------v~P~lYia~ 259 (312)
|.+|+ -+|-+|+|.. +..+.+.+||+++|.-|-.|-. +++. .+...+|..|.. -.++|-|++
T Consensus 198 l~~A~rpvIl~G~g~~--~a~~~l~~lae~~~~Pv~~t~~gkg~~~~---~hp~~~G~~G~~~~~~~~~~~~~aDlvl~i 272 (549)
T 3eya_A 198 LRYSSNIALMCGSGCA--GAHKELVEFAGKIKAPIVHALRGKEHVEY---DNPYDVGMTGLIGFSSGFHTMMNADTLVLL 272 (549)
T ss_dssp HHTCCSEEEEECGGGT--TCHHHHHHHHHHHTCCEEECGGGHHHHSS---SCTTBCCCCSTTSCHHHHHHHHHCSEEEEE
T ss_pred HHhCCCcEEEECCCch--HHHHHHHHHHHHhCCCEEECCccCcCCCC---CCcccccCCCCCCCHHHHHHHHhCCEEEEE
Confidence 34453 4445577763 4568899999999998877643 2332 233456655431 258999999
Q ss_pred eeccchhhhcccCCCcEEEEEcCCCCCC-cccccceEEeecHhHHHHHHHhhh
Q psy9406 260 GISGAIQHLSGMKDSKIIVAINQDEDAP-IFDISDYGLVGDLFEIIPKFIKYL 311 (312)
Q Consensus 260 GISGa~qH~~G~~~s~~IvAIN~D~~Ap-If~~aDygiVgD~~~vlp~l~~~l 311 (312)
|.+=.. ..-+.....+|-||.||.-. -+...|+.+++|+.++|.+|.+.+
T Consensus 273 G~~~~~--~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l 323 (549)
T 3eya_A 273 GTQFPY--RAFYPTDAKIIQIDINPASIGAHSKVDMALVGDIKSTLRALLPLV 323 (549)
T ss_dssp SCCCCC--GGGSCSSSEEEEEESCGGGTTSSSCCSEEEECCHHHHHHHHGGGS
T ss_pred CCCCCc--cccCCCCCeEEEEeCCHHHhCCCCCCCeEEEeCHHHHHHHHHHhc
Confidence 975322 12234445688899998631 123579999999999999998765
No 20
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=94.62 E-value=0.096 Score=52.38 Aligned_cols=110 Identities=14% Similarity=0.043 Sum_probs=71.0
Q ss_pred EEEEeCccCCCccchHHHHHHHHHhCCeeeecHhhHhcCCC-C--CCeEeccCC---------ceeCCceEEEEeec---
Q psy9406 198 IVVAGGRGLGSSKNFKILEGLADKLNAAIGASRAAVDAGYI-S--NNLQIGQTG---------KIVAPQLYIAIGIS--- 262 (312)
Q Consensus 198 vvV~~GrG~~~~e~~~~~~~LA~~lga~vg~SRp~vd~gw~-~--~~~qIG~sG---------~~v~P~lYia~GIS--- 262 (312)
-+|-+|.|. ..+..+.+.+||+++|+-|-+|--. .+.+ | +...+|..| ..+.++|-|++|-.
T Consensus 246 PvIl~G~g~-~~~a~~~l~~lae~~~~PV~~t~~~--~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~Dlvl~iG~~~~~ 322 (604)
T 2x7j_A 246 GMIVCGELH-SDADKENIIALSKALQYPILADPLS--NLRNGVHDKSTVIDAYDSFLKDDELKRKLRPDVVIRFGPMPVS 322 (604)
T ss_dssp EEEEECCCC-CHHHHHHHHHHHHHHTCCEEECGGG--TTTBSSSCCTTEECCHHHHTTSHHHHHHHCCSEEEEESSCCSC
T ss_pred eEEEECCCC-cHHHHHHHHHHHHhcCceEEEcccc--cccccCCCCcceechHHHHhcCchhhhhcCCCEEEEECCcCcc
Confidence 455556676 4456789999999999988776321 1111 2 223566443 13468999999964
Q ss_pred cch-hhhcccCCCcEEEEEcCCCCCC-cccccceEEeecHhHHHHHHHhhh
Q psy9406 263 GAI-QHLSGMKDSKIIVAINQDEDAP-IFDISDYGLVGDLFEIIPKFIKYL 311 (312)
Q Consensus 263 Ga~-qH~~G~~~s~~IvAIN~D~~Ap-If~~aDygiVgD~~~vlp~l~~~l 311 (312)
... ++....++. .+|-|+.|+.-- =+..+|+.+++|+.++|.+|++.+
T Consensus 323 ~~~~~~~~~~~~~-~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l 372 (604)
T 2x7j_A 323 KPVFLWLKDDPTI-QQIVIDEDGGWRDPTQASAHMIHCNASVFAEEIMAGL 372 (604)
T ss_dssp HHHHHHHHHCTTS-EEEEECTTCCCCCTTSCCSEEECSCHHHHHHHHHHTS
T ss_pred HHHHHHHhhCCCC-eEEEECCCCCccCCCccceEEEEcCHHHHHHHHHHhh
Confidence 222 222222233 577799998532 123579999999999999998865
No 21
>1s5p_A NAD-dependent deacetylase; protein deacetylase, SIR2 homologue, hydrolase; HET: ALY; 1.96A {Escherichia coli} SCOP: c.31.1.5
Probab=94.56 E-value=0.04 Score=48.76 Aligned_cols=57 Identities=23% Similarity=0.406 Sum_probs=43.8
Q ss_pred ceEEEEeeccchhhhccc-----CCCcEEEEEcCCCCCCcccccceEEeecHhHHHHHHHhhh
Q psy9406 254 QLYIAIGISGAIQHLSGM-----KDSKIIVAINQDEDAPIFDISDYGLVGDLFEIIPKFIKYL 311 (312)
Q Consensus 254 ~lYia~GISGa~qH~~G~-----~~s~~IvAIN~D~~ApIf~~aDygiVgD~~~vlp~l~~~l 311 (312)
+|+|.+|.|+.++=.+++ +.-..+|-||.+|. |.-+.+|+.|-+|+-++||+|.++|
T Consensus 169 dl~lviGTSl~V~Pa~~l~~~a~~~g~~~i~iN~~~t-~~~~~~~~~i~~~~~~~l~~l~~~l 230 (235)
T 1s5p_A 169 DIFIAIGTSGHVYPAAGFVHEAKLHGAHTVELNLEPS-QVGNEFAEKYYGPASQVVPEFVEKL 230 (235)
T ss_dssp SEEEEESCCTTEETGGGHHHHHHHTTCEEEEEESSSC-C---CCSEEEESCHHHHHHHHHHHH
T ss_pred CEEEEECcCCchhhHHHHHHHHHHcCCeEEEEECCCC-CCCccccEEEeCCHHHHHHHHHHHH
Confidence 799999999988655543 11245778999984 6677899999999999999999876
No 22
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=94.07 E-value=0.11 Score=52.04 Aligned_cols=109 Identities=19% Similarity=0.304 Sum_probs=74.0
Q ss_pred EEEEeCccCCCccchHHHHHHHHHhCCeeeecHhhHhcCCCCC--CeEeccCCcee----------CCceEEEEeec---
Q psy9406 198 IVVAGGRGLGSSKNFKILEGLADKLNAAIGASRAAVDAGYISN--NLQIGQTGKIV----------APQLYIAIGIS--- 262 (312)
Q Consensus 198 vvV~~GrG~~~~e~~~~~~~LA~~lga~vg~SRp~vd~gw~~~--~~qIG~sG~~v----------~P~lYia~GIS--- 262 (312)
-++-+|.|+...+..+.+.+||+++|+-|-+|-.. .|.+|. ...+|..|..- .+++-|.+|-.
T Consensus 229 pvil~G~g~~~~~a~~~l~~lae~~~~PV~~t~~~--~g~~~~~hp~~~G~~g~~~~~~~~~~~l~~aDlvl~iG~~~~~ 306 (616)
T 2pan_A 229 PVIVAGGGVINADAAALLQQFAELTSVPVIPTLMG--WGCIPDDHELMAGMVGLQTAHRYGNATLLASDMVFGIGNRFAN 306 (616)
T ss_dssp EEEEECHHHHHTTCHHHHHHHHHHHTCCEEECTTT--TTSSCTTSTTBCCCCSSSSCCHHHHHHHHHCSEEEEESCCCCH
T ss_pred eEEEECCCcCcccHHHHHHHHHHHhCCCEEEcccc--CccCCCCCccccCCccccCCHHHHHHHHHhCCEEEEECCCCcc
Confidence 44555777765567789999999999999877433 455553 34566655422 46999999963
Q ss_pred ---cchhhhcccCCCcEEEEEcCCCCC-CcccccceEEeecHhHHHHHHHhhh
Q psy9406 263 ---GAIQHLSGMKDSKIIVAINQDEDA-PIFDISDYGLVGDLFEIIPKFIKYL 311 (312)
Q Consensus 263 ---Ga~qH~~G~~~s~~IvAIN~D~~A-pIf~~aDygiVgD~~~vlp~l~~~l 311 (312)
|...... .+. .+|-||.||.- -=....|+.+++|..++|.+|.+.+
T Consensus 307 ~~~~~~~~~~--~~~-~~i~id~d~~~~~~~~~~~~~i~~D~~~~l~~L~~~l 356 (616)
T 2pan_A 307 RHTGSVEKYT--EGR-KIVHIDIEPTQIGRVLCPDLGIVSDAKAALTLLVEVA 356 (616)
T ss_dssp HHHSSHHHHH--TTC-EEEEEESCGGGTTSSSCCSSCEECCHHHHHHHHHHHH
T ss_pred cccCcccccC--CCC-eEEEEeCCHHHhCCCCCCCeEEEcCHHHHHHHHHHHh
Confidence 3332221 333 57789998842 1123579999999999999998754
No 23
>1q1a_A HST2 protein; ternary complex, histone deacetylase, 2'-O-ADP ribose,, gene regulation; HET: ALY OAD; 1.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 PDB: 1szd_A* 1szc_A* 2od7_A* 2od9_A* 2qqf_A* 2qqg_A* 1q17_A* 2od2_A*
Probab=93.98 E-value=0.059 Score=49.13 Aligned_cols=61 Identities=16% Similarity=0.094 Sum_probs=46.6
Q ss_pred CCceEEEEeeccchhhhccc----CCCcEEEEEcCCCCCCc---ccccceEEeecHhHHHHHHHhhhC
Q psy9406 252 APQLYIAIGISGAIQHLSGM----KDSKIIVAINQDEDAPI---FDISDYGLVGDLFEIIPKFIKYLN 312 (312)
Q Consensus 252 ~P~lYia~GISGa~qH~~G~----~~s~~IvAIN~D~~ApI---f~~aDygiVgD~~~vlp~l~~~l~ 312 (312)
+.+|+|.+|.|++++=.+++ +....+|.||.+|..++ -+.+|+.|-+|..++||+|.++|.
T Consensus 211 ~~DlllviGTSl~V~Pa~~l~~~~~~~~~~v~IN~~~~~~~~~~~~~~d~~i~~~~~~~l~~l~~~l~ 278 (289)
T 1q1a_A 211 QQPLVIVVGTSLAVYPFASLPEEIPRKVKRVLCNLETVGDFKANKRPTDLIVHQYSDEFAEQLVEELG 278 (289)
T ss_dssp CCCEEEEESCCCCEETTTHHHHHSCTTSEEEEESSSCCTHHHHSCCTTCEEECCCHHHHHHHHHHHHT
T ss_pred cCCEEEEEccCCChhhHHHHHHHHhcCCCEEEEECCCcccCCCCCcceeEEEeCCHHHHHHHHHHHcC
Confidence 57899999999988755444 32334667999987532 235899999999999999998763
No 24
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=93.81 E-value=0.29 Score=48.76 Aligned_cols=110 Identities=15% Similarity=0.174 Sum_probs=74.6
Q ss_pred cEEEEeCccCCCccchHHHHHHHHHhCCeeeecHhhHhcCCCC--CCeEeccCCce---------eCCceEEEEeeccch
Q psy9406 197 KIVVAGGRGLGSSKNFKILEGLADKLNAAIGASRAAVDAGYIS--NNLQIGQTGKI---------VAPQLYIAIGISGAI 265 (312)
Q Consensus 197 ~vvV~~GrG~~~~e~~~~~~~LA~~lga~vg~SRp~vd~gw~~--~~~qIG~sG~~---------v~P~lYia~GISGa~ 265 (312)
+-++-+|.|+ . +..+.+.+||+.+|+-|-+|- .-.|.+| +...+|..|.. =.+++-|++|-.=..
T Consensus 207 rpvil~G~g~-~-~a~~~l~~lae~~~~Pv~~t~--~g~g~~~~~~p~~~G~~g~~g~~~~~~~l~~aDlvl~iG~~~~~ 282 (590)
T 1v5e_A 207 RPVIYAGIGT-M-GHGPAVQELARKIKAPVITTG--KNFETFEWDFEALTGSTYRVGWKPANETILEADTVLFAGSNFPF 282 (590)
T ss_dssp SEEEEECGGG-T-TCHHHHHHHHHHHTCCEEECT--TCGGGSCTTCTTEEEESSSSSCHHHHHHHHHCSEEEEESCCCTT
T ss_pred CeEEEEcCch-h-HHHHHHHHHHHHHCCCEEEcc--ccCcCCCCCChhhCccCcccCCHHHHHHHHhCCEEEEECCCCcc
Confidence 4566667787 6 778899999999999998772 2334554 34577777632 257999999963221
Q ss_pred hhhcc--cCCCcEEEEEcCCCCCC-cccccceEEeecHhHHHHHHHhhh
Q psy9406 266 QHLSG--MKDSKIIVAINQDEDAP-IFDISDYGLVGDLFEIIPKFIKYL 311 (312)
Q Consensus 266 qH~~G--~~~s~~IvAIN~D~~Ap-If~~aDygiVgD~~~vlp~l~~~l 311 (312)
-.+.| ..+. .+|-||.|+.-- =+...|+.+++|+.++|.+|.+.+
T Consensus 283 ~~~~~~~~~~~-~~i~id~d~~~~~~~~~~~~~i~gd~~~~l~~L~~~l 330 (590)
T 1v5e_A 283 SEVEGTFRNVD-NFIQIDIDPAMLGKRHHADVAILGDAALAIDEILNKV 330 (590)
T ss_dssp TTTTTTTTTCS-EEEEEESCGGGTTSSSCCSEEEESCHHHHHHHHHHHS
T ss_pred hhccccCCCCC-eEEEEeCCHHHHCCCcCCCeEEEcCHHHHHHHHHHhh
Confidence 11000 2334 577799887421 134579999999999999998865
No 25
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=93.60 E-value=0.069 Score=52.42 Aligned_cols=110 Identities=14% Similarity=0.103 Sum_probs=73.2
Q ss_pred EEEEeCccCCCccchHHHHHHHHHhCCee-eecHhhHhcCCCCC--CeEeccCCc-------e-eCCceEEEEeeccchh
Q psy9406 198 IVVAGGRGLGSSKNFKILEGLADKLNAAI-GASRAAVDAGYISN--NLQIGQTGK-------I-VAPQLYIAIGISGAIQ 266 (312)
Q Consensus 198 vvV~~GrG~~~~e~~~~~~~LA~~lga~v-g~SRp~vd~gw~~~--~~qIG~sG~-------~-v~P~lYia~GISGa~q 266 (312)
-++-+|.|....+..+.+.+||+.+|.-| .-|-. ..|.+|. ...+|..|. . =.++|-|++|-.=...
T Consensus 203 pvil~G~g~~~~~a~~~l~~lae~~~~Pv~~~~~~--g~g~~~~~~p~~~G~~g~~~~~~~~~l~~aDlvl~iG~~~~~~ 280 (528)
T 1q6z_A 203 PAIVLGPDVDAANANADCVMLAERLKAPVWVAPSA--PRCPFPTRHPCFRGLMPAGIAAISQLLEGHDVVLVIGAPVFRY 280 (528)
T ss_dssp CEEEECHHHHHTTCHHHHHHHHHHHTCCEEECSSC--SBCCSCTTSTTEEEECCSCHHHHHHHHTTCSEEEEESSCTTCC
T ss_pred eEEEECCccchhhHHHHHHHHHHHHCCCEEEeccC--ccccCCCCCccccCcCCCCcHHHHHHHhcCCEEEEECCCCccc
Confidence 45555677655667789999999999988 44321 2344543 447777761 1 2579999999642222
Q ss_pred hhcc----cCCCcEEEEEcCCCCC--CcccccceEEeecHhHHHHHHHhhh
Q psy9406 267 HLSG----MKDSKIIVAINQDEDA--PIFDISDYGLVGDLFEIIPKFIKYL 311 (312)
Q Consensus 267 H~~G----~~~s~~IvAIN~D~~A--pIf~~aDygiVgD~~~vlp~l~~~l 311 (312)
++.+ ......+|-||.|+.- +- ..|+.+++|+.++|.+|.+.+
T Consensus 281 ~~~~~~~~~~~~~~~i~id~d~~~~~~~--~~~~~i~~d~~~~l~~L~~~~ 329 (528)
T 1q6z_A 281 HQYDPGQYLKPGTRLISVTCDPLEAARA--PMGDAIVADIGAMASALANLV 329 (528)
T ss_dssp CSCCCSCSSCTTCEEEEEESCHHHHHHC--SSSEEEESCHHHHHHHHHHHS
T ss_pred cccCcCCcCCCCCeEEEEeCCHHHhCCC--CCCeeEeCCHHHHHHHHHHHh
Confidence 2222 2223467889998741 11 579999999999999998865
No 26
>1ma3_A SIR2-AF2, transcriptional regulatory protein, SIR2 family; enzyme-substrate complex, protein binding, transcription; HET: ALY MES; 2.00A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1s7g_A* 1yc2_A*
Probab=92.99 E-value=0.078 Score=47.37 Aligned_cols=59 Identities=17% Similarity=0.308 Sum_probs=46.7
Q ss_pred CceEEEEeeccchhhhccc-----CCCcEEEEEcCCCCCCcccccceEEeecHhHHHHHHHhhhC
Q psy9406 253 PQLYIAIGISGAIQHLSGM-----KDSKIIVAINQDEDAPIFDISDYGLVGDLFEIIPKFIKYLN 312 (312)
Q Consensus 253 P~lYia~GISGa~qH~~G~-----~~s~~IvAIN~D~~ApIf~~aDygiVgD~~~vlp~l~~~l~ 312 (312)
.+|.|.+|-|+.++=.+++ +.-..+|-||.++. ++-+.+|+.|-+|+.++||+|.+.|+
T Consensus 184 adl~lviGTSl~V~P~~~l~~~a~~~g~~~i~iN~~~~-~~d~~~~~~i~~~~~~~l~~l~~~l~ 247 (253)
T 1ma3_A 184 CDAFMVVGSSLVVYPAAELPYIAKKAGAKMIIVNAEPT-MADPIFDVKIIGKAGEVLPKIVEEVK 247 (253)
T ss_dssp CSEEEEESCCSCEETGGGHHHHHHHHTCEEEEEESSCC-TTGGGCSEEEESCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCceeccHHHHHHHHHHcCCeEEEEeCCCC-CCCCceeEEEeCCHHHHHHHHHHHHH
Confidence 4899999999888766655 11335778999875 55678999999999999999988763
No 27
>1yc5_A NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, SIRT1, nicotinamide, hydrolase; HET: ALY; 1.40A {Thermotoga maritima} SCOP: c.31.1.5 PDB: 2h2d_A* 2h2f_A 2h2g_A* 2h2h_A* 2h2i_A* 2h4f_A* 2h4j_A* 3d4b_A* 3d81_A* 3pdh_A* 2h4h_A* 3jr3_A* 2h59_A*
Probab=92.92 E-value=0.097 Score=46.54 Aligned_cols=59 Identities=20% Similarity=0.269 Sum_probs=47.3
Q ss_pred CceEEEEeeccchhhhccc-----CCCcEEEEEcCCCCCCcccccceEEeecHhHHHHHHHhhhC
Q psy9406 253 PQLYIAIGISGAIQHLSGM-----KDSKIIVAINQDEDAPIFDISDYGLVGDLFEIIPKFIKYLN 312 (312)
Q Consensus 253 P~lYia~GISGa~qH~~G~-----~~s~~IvAIN~D~~ApIf~~aDygiVgD~~~vlp~l~~~l~ 312 (312)
.+|.|.+|-|+.++-.+++ +.-..+|-||.++. ++-+.+|+.|-+|..++||+|.++|.
T Consensus 181 adl~lviGTSl~V~P~~~l~~~a~~~g~~~i~IN~~~~-~~d~~~~~~i~~~~~~~l~~l~~~lg 244 (246)
T 1yc5_A 181 ASLMIVLGSSLVVYPAAELPLITVRSGGKLVIVNLGET-PFDDIATLKYNMDVVEFARRVMEEGG 244 (246)
T ss_dssp CSEEEEESCCSCEETGGGHHHHHHHHTCEEEEECSSCC-TTGGGCSEEECSCHHHHHHHHHHHHT
T ss_pred CCEEEEECCCCcchhHHHHHHHHHHcCCeEEEEeCCCC-CCCcceeEEEeCCHHHHHHHHHHHcC
Confidence 3799999999988766666 11345778999875 55678899999999999999998873
No 28
>1q14_A HST2 protein; histone deacetylase, hydrolase; 2.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5
Probab=92.58 E-value=0.13 Score=48.48 Aligned_cols=61 Identities=16% Similarity=0.082 Sum_probs=46.8
Q ss_pred eCCceEEEEeeccchhhhccc----CCCcEEEEEcCCCCCCc---ccccceEEeecHhHHHHHHHhhh
Q psy9406 251 VAPQLYIAIGISGAIQHLSGM----KDSKIIVAINQDEDAPI---FDISDYGLVGDLFEIIPKFIKYL 311 (312)
Q Consensus 251 v~P~lYia~GISGa~qH~~G~----~~s~~IvAIN~D~~ApI---f~~aDygiVgD~~~vlp~l~~~l 311 (312)
-+.+|+|.+|.|++++=.+++ +.-..+|.||.+|..++ -+.+|+.|-+|.-++||.|.+.|
T Consensus 218 ~~aDllLviGTSl~V~Paa~l~~~~~~g~~~v~IN~~~t~~~~~~~~~~d~~i~g~~~evl~~L~~~L 285 (361)
T 1q14_A 218 PQQPLVIVVGTSLAVYPFASLPEEIPRKVKRVLCNLETVGDFKANKRPTDLIVHQYSDEFAEQLVEEL 285 (361)
T ss_dssp -CCCEEEEESCCCCSTTGGGHHHHSCTTSEEEEESSSCCHHHHHTCCTTCEEECSCHHHHHHHHHHHH
T ss_pred ccCCEEEEECCCCCchhHHHHHHHHhcCCeEEEEeCCCccccccCcccccEEEeCCHHHHHHHHHHHc
Confidence 357999999999998765555 32334667999986422 24589999999999999999876
No 29
>2hjh_A NAD-dependent histone deacetylase SIR2; protein, sirtuin, acetyl-ADP-ribose, nicotinamide, hydrolase; HET: XYQ; 1.85A {Saccharomyces cerevisiae}
Probab=92.32 E-value=0.2 Score=46.92 Aligned_cols=58 Identities=24% Similarity=0.185 Sum_probs=46.5
Q ss_pred CCceEEEEeeccchhhhccc----CCCcEEEEEcCCCCCCcccccceEEeecHhHHHHHHHhhh
Q psy9406 252 APQLYIAIGISGAIQHLSGM----KDSKIIVAINQDEDAPIFDISDYGLVGDLFEIIPKFIKYL 311 (312)
Q Consensus 252 ~P~lYia~GISGa~qH~~G~----~~s~~IvAIN~D~~ApIf~~aDygiVgD~~~vlp~l~~~l 311 (312)
+.+|.|.+|-|.+++=.+++ +....+|.||.+|.. ...+|+-|-||.-+++|.|.++|
T Consensus 255 ~aDllLviGTSL~V~Paa~lv~~~~~~~~~v~IN~~~t~--~~~~dl~i~g~~~~vl~~L~~~l 316 (354)
T 2hjh_A 255 ECDLLICIGTSLKVAPVSEIVNMVPSHVPQVLINRDPVK--HAEFDLSLLGYCDDIAAMVAQKC 316 (354)
T ss_dssp TCCEEEEESCCCCEETGGGHHHHSCTTSCEEEEESSCCT--TSCCSEEEESCHHHHHHHHHHHH
T ss_pred hCCEEEEECcCCCchhHHHHHHHHhcCCcEEEEcCCCCC--CCCcCEEEeCCHHHHHHHHHHHc
Confidence 46899999999998765554 323357889999864 25689999999999999999876
No 30
>1m2k_A Silent information regulator 2; protein-ligand complex, gene regulation; HET: APR; 1.47A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1m2g_A* 1m2h_A* 1m2j_A* 1m2n_A* 1ici_A*
Probab=91.80 E-value=0.24 Score=44.07 Aligned_cols=57 Identities=28% Similarity=0.526 Sum_probs=45.5
Q ss_pred ceEEEEeeccchhhhccc-----CCCcEEEEEcCCCCCCcccccceEEeecHhHHHHHHHhhh
Q psy9406 254 QLYIAIGISGAIQHLSGM-----KDSKIIVAINQDEDAPIFDISDYGLVGDLFEIIPKFIKYL 311 (312)
Q Consensus 254 ~lYia~GISGa~qH~~G~-----~~s~~IvAIN~D~~ApIf~~aDygiVgD~~~vlp~l~~~l 311 (312)
+|.|.+|-|+.++-.+++ +.-..+|-||.++. ++-+.+|+.|-+|+.++||+|.++|
T Consensus 179 dlllviGTSl~V~P~~~l~~~a~~~g~~~i~IN~~~~-~~d~~~~~~i~~~~~~~l~~l~~~l 240 (249)
T 1m2k_A 179 DVIIVAGTSAVVQPAASLPLIVKQRGGAIIEINPDET-PLTPIADYSLRGKAGEVMDELVRHV 240 (249)
T ss_dssp SEEEEESCCSCSTTGGGHHHHHHHTTCEEEEECSSCC-TTGGGCSEEECSCHHHHHHHHHHHH
T ss_pred CEEEEEccCCCccchHHHHHHHHHcCCeEEEEeCCCC-CCCcceeEEEeCCHHHHHHHHHHHH
Confidence 899999999988755552 12345778999875 4567899999999999999998876
No 31
>3glr_A NAD-dependent deacetylase sirtuin-3, mitochondria; NAD dependent deacetylase, sirtuin, substrate peptide comple hydrolase, metal-binding; HET: ALY; 1.80A {Homo sapiens} PDB: 3gls_A 3glt_A* 3glu_A 4hd8_A* 4fvt_A*
Probab=90.57 E-value=0.29 Score=44.50 Aligned_cols=60 Identities=20% Similarity=0.345 Sum_probs=48.1
Q ss_pred CCceEEEEeeccchhhhccc----CCCcEEEEEcCCCCCCc---ccccceEEeecHhHHHHHHHhhh
Q psy9406 252 APQLYIAIGISGAIQHLSGM----KDSKIIVAINQDEDAPI---FDISDYGLVGDLFEIIPKFIKYL 311 (312)
Q Consensus 252 ~P~lYia~GISGa~qH~~G~----~~s~~IvAIN~D~~ApI---f~~aDygiVgD~~~vlp~l~~~l 311 (312)
+.+|.|.+|-|+.++-.+++ +....+|-||++|-.+. -..+|+-+-||.-+++|+|.+.|
T Consensus 197 ~aDlllviGTSl~V~Paa~l~~~~~~~~~~v~IN~~~~~~~~~~~~~~d~~~~g~~~~~~~~L~~~l 263 (285)
T 3glr_A 197 MADLLLILGTSLEVEPFASLTEAVRSSVPRLLINRDLVGPLAWHPRSRDVAQLGDVVHGVESLVELL 263 (285)
T ss_dssp HCSEEEEESCCCCEETTGGGGGSSCTTSCEEEEESSCCTHHHHSCCTTEEEEESCHHHHHHHHHHHH
T ss_pred cCCEEEEeCCCCccccHHHHHHHHhCCCcEEEECCCCcCccccCCCCccEEEcCCHHHHHHHHHHHh
Confidence 57899999999999876664 23334778999996542 25799999999999999999887
No 32
>3k35_A NAD-dependent deacetylase sirtuin-6; rossmann fold, Zn-binding domain, structural genomics, struc genomics consortium, SGC, ADP-ribosylation; HET: APR; 2.00A {Homo sapiens}
Probab=90.03 E-value=0.47 Score=43.81 Aligned_cols=60 Identities=20% Similarity=0.274 Sum_probs=49.2
Q ss_pred CCceEEEEeeccchhhhccc-----CCCcEEEEEcCCCCCCcccccceEEeecHhHHHHHHHhhhC
Q psy9406 252 APQLYIAIGISGAIQHLSGM-----KDSKIIVAINQDEDAPIFDISDYGLVGDLFEIIPKFIKYLN 312 (312)
Q Consensus 252 ~P~lYia~GISGa~qH~~G~-----~~s~~IvAIN~D~~ApIf~~aDygiVgD~~~vlp~l~~~l~ 312 (312)
+.+|.|.+|-|+.++--+++ +.-..+|-||.++. +.=+.||+-|-++.-++||.|.+.|.
T Consensus 206 ~aDllLViGTSL~V~Paa~l~~~a~~~G~~vviIN~~~t-~~d~~adl~i~g~~~evl~~L~~~Lg 270 (318)
T 3k35_A 206 NADLSITLGTSLQIRPSGNLPLATKRRGGRLVIVNLQPT-KHDRHADLRIHGYVDEVMTRLMKHLG 270 (318)
T ss_dssp TCSEEEEESCCCCSTTGGGHHHHHHHTTCEEEEECSSCC-TTGGGCSEEECSCHHHHHHHHHHHHT
T ss_pred cCCEEEEEccCCCchhhhhhHHHHHhcCCEEEEECCCCC-CCCCcccEEEeCCHHHHHHHHHHHhC
Confidence 57999999999999977776 22344778999875 45678999999999999999998873
No 33
>1j8f_A SIRT2, sirtuin 2, isoform 1, silencing INFO; gene regulation, transferase; 1.70A {Homo sapiens} SCOP: c.31.1.5
Probab=89.88 E-value=0.48 Score=43.85 Aligned_cols=61 Identities=18% Similarity=0.246 Sum_probs=46.6
Q ss_pred CCceEEEEeeccchhhhccc----CCCcEEEEEcCCCCCC---c------------c----cccceEEeecHhHHHHHHH
Q psy9406 252 APQLYIAIGISGAIQHLSGM----KDSKIIVAINQDEDAP---I------------F----DISDYGLVGDLFEIIPKFI 308 (312)
Q Consensus 252 ~P~lYia~GISGa~qH~~G~----~~s~~IvAIN~D~~Ap---I------------f----~~aDygiVgD~~~vlp~l~ 308 (312)
+.+|+|.+|.|..++=.+++ +....+|.||.++.-. | | +.+|+.|-||.-++++.|.
T Consensus 220 ~aDlllviGTSl~V~P~a~l~~~~~~~~~~v~IN~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~gd~~~~l~~L~ 299 (323)
T 1j8f_A 220 KVDLLLVMGTSLQVQPFASLISKAPLSTPRLLINKEKAGQSDPFLGMIMGLGGGMDFDSKKAYRDVAWLGECDQGCLALA 299 (323)
T ss_dssp SCSEEEEESSCSCSHHHHHHHTTSCTTCCEEEEESSCCCCCCHHHHHHHHHHTCCCSSSTTCCSEEEEESCHHHHHHHHH
T ss_pred CCCEEEEEeeCcccHHHHHHHHHHHcCCcEEEEeCCCCCCCcccccccccccccccccccccceeEEEeCCHHHHHHHHH
Confidence 67999999999999854443 2234567899988632 1 1 4589999999999999999
Q ss_pred hhhC
Q psy9406 309 KYLN 312 (312)
Q Consensus 309 ~~l~ 312 (312)
++|.
T Consensus 300 ~~lg 303 (323)
T 1j8f_A 300 ELLG 303 (323)
T ss_dssp HHTT
T ss_pred HHcC
Confidence 8773
No 34
>3riy_A NAD-dependent deacetylase sirtuin-5; desuccinylase, demalonylase, posttranslational modification, binding domain, rossmann fold domain; HET: SLL NAD; 1.55A {Homo sapiens} SCOP: c.31.1.5 PDB: 3rig_A* 4f4u_A* 4f56_A* 4hda_A* 2b4y_A* 2nyr_A* 4g1c_A*
Probab=89.11 E-value=0.39 Score=43.29 Aligned_cols=56 Identities=13% Similarity=0.214 Sum_probs=44.9
Q ss_pred CCceEEEEeeccchhhhccc-----CCCcEEEEEcCCCCCCcccccceEEeecHhHHHHHHH
Q psy9406 252 APQLYIAIGISGAIQHLSGM-----KDSKIIVAINQDEDAPIFDISDYGLVGDLFEIIPKFI 308 (312)
Q Consensus 252 ~P~lYia~GISGa~qH~~G~-----~~s~~IvAIN~D~~ApIf~~aDygiVgD~~~vlp~l~ 308 (312)
+.+|.|.+|-|+.++=.+++ +.-..+|-||.+|. |.=+.+|+.|-+|+-++||+|+
T Consensus 212 ~aDl~lviGTSl~V~Paa~l~~~a~~~g~~~v~IN~~~t-~~d~~~~~~i~g~~~~~l~~l~ 272 (273)
T 3riy_A 212 HCDLCLVVGTSSVVYPAAMFAPQVAARGVPVAEFNTETT-PATNRFRFHFQGPCGTTLPEAL 272 (273)
T ss_dssp HCSEEEEESCCSCEETGGGHHHHHHHTTCCEEEEESSCC-TTGGGSSEEEESCHHHHHHHHH
T ss_pred cCCEEEEEeeCCcchhHHHhHHHHHHCCCEEEEECCCCC-CCCcceeEEEeCCHHHHHHHHh
Confidence 57899999999988776665 12334677999875 4557899999999999999986
No 35
>3pki_A NAD-dependent deacetylase sirtuin-6; ADP ribose, structural genomics, structural genomics consortium, SGC, hydrolase; HET: AR6; 2.04A {Homo sapiens} PDB: 3pkj_A*
Probab=88.42 E-value=0.67 Score=43.39 Aligned_cols=59 Identities=19% Similarity=0.265 Sum_probs=48.6
Q ss_pred CCceEEEEeeccchhhhccc-----CCCcEEEEEcCCCCCCcccccceEEeecHhHHHHHHHhhh
Q psy9406 252 APQLYIAIGISGAIQHLSGM-----KDSKIIVAINQDEDAPIFDISDYGLVGDLFEIIPKFIKYL 311 (312)
Q Consensus 252 ~P~lYia~GISGa~qH~~G~-----~~s~~IvAIN~D~~ApIf~~aDygiVgD~~~vlp~l~~~l 311 (312)
+.+|.|.+|-|+.++=.+++ +.-..||.||.++. +.=+.||+-|-++.-++||.|.++|
T Consensus 206 ~aDllLViGTSL~V~Paa~Lp~~a~~~G~~vviIN~~pT-~~d~~adl~i~g~a~evl~~L~~~L 269 (355)
T 3pki_A 206 NADLSITLGTSLQIRPSGNLPLATKRRGGRLVIVNLQPT-KHDRHADLRIHGYVDEVMTRLMEHL 269 (355)
T ss_dssp HCSEEEEESCCCCSTTGGGTTHHHHHTTCEEEEECSSCC-TTGGGCSEEECSCHHHHHHHHHHHT
T ss_pred cCCEEEEEeeCCCchhhhhhHHHHHhcCCEEEEECCCCC-CCCCccCEEEeCCHHHHHHHHHHHh
Confidence 47899999999999877776 12245777999875 4567899999999999999999887
No 36
>3cf4_G Acetyl-COA decarboxylase/synthase epsilon subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=87.23 E-value=0.31 Score=40.57 Aligned_cols=108 Identities=14% Similarity=0.117 Sum_probs=63.1
Q ss_pred EEEEeCccCCCccchHHHHHHHHHhCCeeeecHhhHhcCCCCCC----eE--eccCC-----------cee-CCceEEEE
Q psy9406 198 IVVAGGRGLGSSKNFKILEGLADKLNAAIGASRAAVDAGYISNN----LQ--IGQTG-----------KIV-APQLYIAI 259 (312)
Q Consensus 198 vvV~~GrG~~~~e~~~~~~~LA~~lga~vg~SRp~vd~gw~~~~----~q--IG~sG-----------~~v-~P~lYia~ 259 (312)
-++-+|.|+...+..+.+.+||+.+|+-|-.|-. ..|.+|.+ .. +|..| ..+ .-+|-|++
T Consensus 37 Pvil~G~g~~~~~a~~~l~~lae~~~iPV~~t~~--gkg~~~~~hp~~~~~~~G~~G~~~~~~~~~~~~~~~~aDlvl~i 114 (170)
T 3cf4_G 37 PLLMVGTLALDPELLDRVVKISKAANIPIAATGS--SLAVLADKDVDAKYINAHMLGFYLTDPKWPGLDGNGNYDMIITI 114 (170)
T ss_dssp EEEEECSTTCCHHHHHHHHHHHHHHTCCEEECTT--THHHHTTSSSCEEECCHHHHHHHTTCTTCCCSSSSCCCSEEEEE
T ss_pred CEEEECCCccchhHHHHHHHHHHHhCCCEEECcc--cCcccCCCChhhhcceeeeccccCChhhhhHHHHhhcCCEEEEE
Confidence 4555566776667788999999999999877632 22333322 44 66533 223 46899999
Q ss_pred eecc--chhhhcccC---CCcEEEEEcCCCCCCcccccceEEeecHhHHHHHHHhhh
Q psy9406 260 GISG--AIQHLSGMK---DSKIIVAINQDEDAPIFDISDYGLVGDLFEIIPKFIKYL 311 (312)
Q Consensus 260 GISG--a~qH~~G~~---~s~~IvAIN~D~~ApIf~~aDygiVgD~~~vlp~l~~~l 311 (312)
|..= .-.++.+.+ . ..+|.||++-..-+ .. -|.-+ .+.++++.|.+.+
T Consensus 115 G~~~~~~~~~t~~~~~~~~-~~iI~i~~~~~~~~-~~-~~~~l-~~~~~l~~L~~~~ 167 (170)
T 3cf4_G 115 GFKKFYINQVLSAAKNFSN-LKTIAIERGYIQNA-TM-SFGNL-SKADHYAALDELI 167 (170)
T ss_dssp SCCHHHHHHHHHHHHHHCC-CCEEECSSSCCTTS-SE-ECCCC-CHHHHHHHHHHHH
T ss_pred CCccCccccccccccccCC-CeEEEECCCcccch-hh-hhccC-CHHHHHHHHHHHH
Confidence 9764 334333221 2 34567877643222 11 11112 3778888888765
No 37
>3u31_A SIR2A, transcriptional regulatory protein SIR2 homologue; Zn-binding domain, rossmann fold domain; HET: MYK NAD; 2.20A {Plasmodium falciparum} PDB: 3u3d_A* 3jwp_A*
Probab=86.66 E-value=0.51 Score=43.02 Aligned_cols=58 Identities=28% Similarity=0.401 Sum_probs=44.0
Q ss_pred CCceEEEEeeccchhhhccc-----CCCcEEEEEcCCCCCCcc-cccceEEeecHhHHHHHHHhhh
Q psy9406 252 APQLYIAIGISGAIQHLSGM-----KDSKIIVAINQDEDAPIF-DISDYGLVGDLFEIIPKFIKYL 311 (312)
Q Consensus 252 ~P~lYia~GISGa~qH~~G~-----~~s~~IvAIN~D~~ApIf-~~aDygiVgD~~~vlp~l~~~l 311 (312)
+.+|.|.+|-|+.++=.+++ +.-..+|-||.+|. |+- ..+|+.|-||+-++++ |.+.|
T Consensus 216 ~aDllLviGTSl~V~Paa~l~~~a~~~g~~~v~IN~~~t-~~~~~~~d~~i~g~a~~vl~-~~~~l 279 (290)
T 3u31_A 216 KCDLLLVIGTSSTVSTATNLCHFACKKKKKIVEINISKT-YITNKMSDYHVCAKFSELTK-VANIL 279 (290)
T ss_dssp HCSEEEEESCCSCSHHHHHHHHHHHHTTCCEEEEESSCC-TTTTTTCSEEEESCGGGHHH-HHHHH
T ss_pred cCCEEEEECcCCcchhHHHHHHHHHHcCCEEEEECCCCC-CCCCccceEEEECCHHHHHH-HHHHH
Confidence 67999999999999877665 22234677999985 333 4689999999999876 55554
No 38
>4iao_A NAD-dependent histone deacetylase SIR2; protein complex, deacetylase, nucleus, hydrolase-trans complex; HET: APR; 2.90A {Saccharomyces cerevisiae}
Probab=84.29 E-value=1.4 Score=42.91 Aligned_cols=58 Identities=24% Similarity=0.179 Sum_probs=47.4
Q ss_pred CCceEEEEeeccchhhhccc----CCCcEEEEEcCCCCCCcccccceEEeecHhHHHHHHHhhh
Q psy9406 252 APQLYIAIGISGAIQHLSGM----KDSKIIVAINQDEDAPIFDISDYGLVGDLFEIIPKFIKYL 311 (312)
Q Consensus 252 ~P~lYia~GISGa~qH~~G~----~~s~~IvAIN~D~~ApIf~~aDygiVgD~~~vlp~l~~~l 311 (312)
+.+|.|.+|-|+.++=.+++ +....+|.||.+|-.. ..+|+-+-||.-++++.|.++|
T Consensus 393 ~aDLlLVIGTSL~VyPaA~Lv~~a~~~~p~ViIN~ept~~--~~~Dl~l~G~cdevv~~L~~~L 454 (492)
T 4iao_A 393 ECDLLICIGTSLKVAPVSEIVNMVPSHVPQVLINRDPVKH--AEFDLSLLGYCDDIAAMVAQKC 454 (492)
T ss_dssp TCSEEEEESCCCCEETGGGHHHHSBTTSCEEEEESSCCTT--SCCSEEEESCHHHHHHHHHHHT
T ss_pred hCCEEEEeccCCCccchhhHHHHHhcCCcEEEEcCCCCCC--CCccEEEeCCHHHHHHHHHHHh
Confidence 57999999999998866665 3333577799998653 4679999999999999999887
No 39
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=79.96 E-value=6.2 Score=38.69 Aligned_cols=110 Identities=17% Similarity=0.097 Sum_probs=67.3
Q ss_pred cEEEEeCccCCCccchHHHHHHHHHhCCeeeecHhhHhcCCCCC--CeEecc-CC---c------eeCCceEEEEeeccc
Q psy9406 197 KIVVAGGRGLGSSKNFKILEGLADKLNAAIGASRAAVDAGYISN--NLQIGQ-TG---K------IVAPQLYIAIGISGA 264 (312)
Q Consensus 197 ~vvV~~GrG~~~~e~~~~~~~LA~~lga~vg~SRp~vd~gw~~~--~~qIG~-sG---~------~v~P~lYia~GISGa 264 (312)
+-++-+|.|....+..+.+.+||+.+|.-|-+|-. -.|.+|. ...+|. .| . .-.+++-|++|-.=.
T Consensus 211 rpvi~~G~g~~~~~a~~~l~~lae~~~~Pv~~t~~--~~g~~~~~~p~~~G~~~g~~~~~~~~~~l~~aDlvl~iG~~~~ 288 (566)
T 2vbi_A 211 SPVMLLGSKLRAANALAATETLADKLQCAVTIMAA--AKGFFPEDHAGFRGLYWGEVSNPGVQELVETSDALLCIAPVFN 288 (566)
T ss_dssp CEEEEECTTTTTTTCHHHHHHHHHHHCCEEEEEGG--GTTSSCTTSTTEEEEECGGGSCTTHHHHHHTCSEEEEESCCCB
T ss_pred CCEEEECcCccccchHHHHHHHHHHhCCCEEEccc--cCccCCCCCccccccccCccCCHHHHHHHHhCCEEEEECCCcc
Confidence 45666778887777889999999999999987753 4566664 335554 23 2 124799999996322
Q ss_pred hhhhccc---CCCcEEEEEcCCCCCCcccccceEEeecHhHHHHHHHhhh
Q psy9406 265 IQHLSGM---KDSKIIVAINQDEDAPIFDISDYGLVGDLFEIIPKFIKYL 311 (312)
Q Consensus 265 ~qH~~G~---~~s~~IvAIN~D~~ApIf~~aDygiVgD~~~vlp~l~~~l 311 (312)
.-.+.+. .....+|-||.|+.-- .. .+-.--++.++|.+|.+.+
T Consensus 289 ~~~~~~~~~~~~~~~~i~id~d~~~~--~~-~~~~~~~~~~~l~~L~~~l 335 (566)
T 2vbi_A 289 DYSTVGWSAWPKGPNVILAEPDRVTV--DG-RAYDGFTLRAFLQALAEKA 335 (566)
T ss_dssp TTTTTTTTSCCCSTTEEEECSSEEEE--TT-EEEESSCHHHHHHHHHHHC
T ss_pred ccccccccccCCCCcEEEEeCChhee--CC-cccCCccHHHHHHHHHHhc
Confidence 2222221 1223466788887421 11 1222223688888888765
No 40
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=79.26 E-value=3.8 Score=40.22 Aligned_cols=106 Identities=16% Similarity=0.120 Sum_probs=66.6
Q ss_pred cEEEEeCccCCCccchHHHHHHHHHhCCeeeecHh-hHhcCCCCCC--eEeccC-C-cee-CCceEEEEeeccc---h-h
Q psy9406 197 KIVVAGGRGLGSSKNFKILEGLADKLNAAIGASRA-AVDAGYISNN--LQIGQT-G-KIV-APQLYIAIGISGA---I-Q 266 (312)
Q Consensus 197 ~vvV~~GrG~~~~e~~~~~~~LA~~lga~vg~SRp-~vd~gw~~~~--~qIG~s-G-~~v-~P~lYia~GISGa---~-q 266 (312)
.+|++|| + ..+..+.+.+||+++|.-|-+|-. - .|..+.+ ..+|.. . ..+ .++|-|++|-.=. . +
T Consensus 222 PvIl~G~-~--~~~a~~~l~~lae~~~~PV~~t~~~~--~~~~~~~~~~~lg~~~~~~~~~~aDlvl~iG~~~~~~~~~~ 296 (556)
T 3hww_A 222 GVVVAGR-M--SAEEGKKVALWAQTLGWPLIGDVLSQ--TGQPLPCADLWLGNAKATSELQQAQIVVQLGSSLTGKRLLQ 296 (556)
T ss_dssp EEEEECB-C--CHHHHHHHHHHHHHHTCCEEECTTTC--SCCSSCCHHHHTTSHHHHHHHTTCSEEEEESBCCCCHHHHH
T ss_pred eEEEECC-C--ChHHHHHHHHHHHhcCCEEEEccCCC--CCCCcCcHHHHhcCchhhhcccCCCEEEEcCCCcccHHHHH
Confidence 3566665 3 345668899999999998877621 2 2444433 233421 1 112 7999999997421 1 1
Q ss_pred hhcccCCCcEEEEEcCCCCC-CcccccceEEeecHhHHHHHHH
Q psy9406 267 HLSGMKDSKIIVAINQDEDA-PIFDISDYGLVGDLFEIIPKFI 308 (312)
Q Consensus 267 H~~G~~~s~~IvAIN~D~~A-pIf~~aDygiVgD~~~vlp~l~ 308 (312)
...-... +.+|-|+.||.- -=+..+|++|++|+.++|.+|.
T Consensus 297 ~~~~~~~-~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~l~ 338 (556)
T 3hww_A 297 WQASCEP-EEYWIVDDIEGRLDPAHHRGRRLIANIADWLELHP 338 (556)
T ss_dssp HHHHCCC-SEEEEEESSCSCCCTTCCSEEEEESCHHHHHHHSC
T ss_pred HHhcCCC-CeEEEECCCCccCCCCCCceEEEEcCHHHHHHhcc
Confidence 2222333 368889999853 1234679999999999998764
No 41
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1
Probab=78.69 E-value=13 Score=32.07 Aligned_cols=90 Identities=16% Similarity=0.044 Sum_probs=52.6
Q ss_pred CEEEEEEeCCCccChHHHH---HHHHHHhcCCcEEEEEEcCCc----------hHHHHHHhhcCCccEEEEecCCCCCCC
Q psy9406 2 PALVIAEHDNSYLKTSTLN---TITAATLCSDEIHILIIGYNI----------EKVILDAKKVNNIKKILLVDSLYFSNN 68 (312)
Q Consensus 2 ~ilv~~E~~~g~l~~~slE---ll~~A~~Lg~~V~av~~G~~~----------~~~a~~~~~~~Gad~V~~~~~~~l~~~ 68 (312)
++|++.=|.+. .++- +|....+-|.+|.++.+..+. ...+.++.+..|++.++.++-+...-.
T Consensus 3 ~vL~v~aHPDD----e~l~~ggtia~~~~~G~~v~vv~lT~G~~g~~~~~~~R~~E~~~A~~~lG~~~~~~l~~~D~~l~ 78 (227)
T 1uan_A 3 DLLVVAPHPDD----GELGCGGTLARAKAEGLSTGILDLTRGEMGSKGTPEEREKEVAEASRILGLDFRGNLGFPDGGLA 78 (227)
T ss_dssp EEEEEESSTTH----HHHHHHHHHHHHHHTTCCEEEEEEECCTTTCCSCHHHHHHHHHHHHHHHTCSEEEEEEECTTCCC
T ss_pred eEEEEEeCCCc----HHHhHHHHHHHHHhCCCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEECCCCCCCCC
Confidence 58888888763 3332 333334446777777665432 122334444579987666654432222
Q ss_pred CHHHHHHHHHHHHh--CCcEEEEcCCCCc
Q psy9406 69 LPENIAAQISVIAS--NYSHILAPATIYG 95 (312)
Q Consensus 69 ~~e~~a~~l~~l~~--~~~~IL~~aT~~G 95 (312)
..+...+.|.++++ +|++|+.+....+
T Consensus 79 ~~~~~~~~l~~~ir~~~P~~V~t~~~~d~ 107 (227)
T 1uan_A 79 DVPEQRLKLAQALRRLRPRVVFAPLEADR 107 (227)
T ss_dssp CCHHHHHHHHHHHHHHCEEEEEEECSCCS
T ss_pred ChHHHHHHHHHHHHHhCCCEEEeCCCCCC
Confidence 34566677777766 6899998765444
No 42
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=75.13 E-value=17 Score=31.64 Aligned_cols=93 Identities=15% Similarity=0.022 Sum_probs=52.9
Q ss_pred CEEEEEEeCCCccChHHHHHHHHHHhcCCcEEEEEEcCCc----------hHHHHHHhhcCCccEEEEecCCCCCCCCHH
Q psy9406 2 PALVIAEHDNSYLKTSTLNTITAATLCSDEIHILIIGYNI----------EKVILDAKKVNNIKKILLVDSLYFSNNLPE 71 (312)
Q Consensus 2 ~ilv~~E~~~g~l~~~slEll~~A~~Lg~~V~av~~G~~~----------~~~a~~~~~~~Gad~V~~~~~~~l~~~~~e 71 (312)
+++++.=|.+.+.--. --+|....+-|.+|.++.+-.+. ...+.++++..|++.++.++-+...-...+
T Consensus 5 ~vL~v~aHPDDe~l~~-Ggtia~~~~~G~~V~vv~lT~G~~g~~~~~~~R~~E~~~A~~~LGv~~~~~L~~~D~~~~~~~ 83 (242)
T 2ixd_A 5 HILAFGAHADDVEIGM-AGTIAKYTKQGYEVGICDLTEADLSSNGTIELRKEEAKVAARIMGVKTRLNLAMPDRGLYMKE 83 (242)
T ss_dssp SEEEEESSTTHHHHHH-HHHHHHHHHTTCCEEEEEEECCTTCSSSCHHHHHHHHHHHHHHHTCCEEEEEEECTTCCCCCH
T ss_pred cEEEEEeCCChHHHhH-HHHHHHHHHCCCeEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHcCCCeEEECCCCCCCCCChH
Confidence 5888888876421100 11222233336777777665331 122334444579997666654433333346
Q ss_pred HHHHHHHHHHh--CCcEEEEcCCCCc
Q psy9406 72 NIAAQISVIAS--NYSHILAPATIYG 95 (312)
Q Consensus 72 ~~a~~l~~l~~--~~~~IL~~aT~~G 95 (312)
...+.|.++++ +|++|+.+....+
T Consensus 84 ~~~~~l~~~ir~~~PdvV~t~~~~d~ 109 (242)
T 2ixd_A 84 EYIREIVKVIRTYKPKLVFAPYYEDR 109 (242)
T ss_dssp HHHHHHHHHHHHHCCSEEEEECSCSS
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCC
Confidence 66777777766 6899998765554
No 43
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=74.65 E-value=8.8 Score=37.63 Aligned_cols=114 Identities=16% Similarity=0.121 Sum_probs=70.2
Q ss_pred CCCC-cEEEEeCccCCCccchHHHHHHHHHhCCeeeecHhhHhcCCCCC--CeEecc-CC---c------eeCCceEEEE
Q psy9406 193 LTSA-KIVVAGGRGLGSSKNFKILEGLADKLNAAIGASRAAVDAGYISN--NLQIGQ-TG---K------IVAPQLYIAI 259 (312)
Q Consensus 193 l~~A-~vvV~~GrG~~~~e~~~~~~~LA~~lga~vg~SRp~vd~gw~~~--~~qIG~-sG---~------~v~P~lYia~ 259 (312)
|.+| +-++-+|.|....+..+.+.+||+.+|+-|-+|- .-.|.+|. ...+|. .| . .-.++|-|++
T Consensus 206 l~~a~rpvil~G~g~~~~~a~~~l~~lae~~~~Pv~~t~--~~kg~~~~~~p~~~G~~~g~~~~~~~~~~l~~aDlvl~i 283 (568)
T 2wvg_A 206 IANRDKVAVLVGSKLRAAGAEEAAVKFADALGGAVATMA--AAKSFFPEENPHYIGTSWGEVSYPGVEKTMKEADAVIAL 283 (568)
T ss_dssp HTTCCCEEEEECTTTTTTTCHHHHHHHHHHHCCEEEEEG--GGTTSSCTTSTTEEEEECGGGSCTTHHHHHHHCSEEEEE
T ss_pred HHhCCCCEEEECccccccchHHHHHHHHHHhCCCEEEch--hcCccCCCCCCceeccccCCcCCHHHHHHHHhCCEEEEE
Confidence 3344 3567777888777778999999999999998774 34566664 345554 23 2 1247999999
Q ss_pred eeccchhhhccc---CCCcEEEEEcCCCCCCcccccceEEeecHhHHHHHHHhhh
Q psy9406 260 GISGAIQHLSGM---KDSKIIVAINQDEDAPIFDISDYGLVGDLFEIIPKFIKYL 311 (312)
Q Consensus 260 GISGa~qH~~G~---~~s~~IvAIN~D~~ApIf~~aDygiVgD~~~vlp~l~~~l 311 (312)
|-.=..-++.+. .....+|-||.|+.-. .. .+-.--++.++|.+|.+.+
T Consensus 284 G~~~~~~~~~~~~~~~~~~~~i~id~d~~~~--~~-~~~~~~~~~~~l~~L~~~l 335 (568)
T 2wvg_A 284 APVFNDYSTTGWTDIPDPKKLVLAEPRSVVV--NG-IRFPSVHLKDYLTRLAQKV 335 (568)
T ss_dssp SCCCBTTTTTTTTCCCCTTTEEEECSSEEEE--TT-EEEESCCHHHHHHHHHHHC
T ss_pred CCCcccccccccccCCCCCcEEEEeCChhhc--CC-eecCCCCHHHHHHHHHHhc
Confidence 963222222221 1223467788887531 11 1222234788899888765
No 44
>1ytl_A Acetyl-COA decarboxylase/synthase complex epsilon 2; structural genomics; 1.80A {Archaeoglobus fulgidus} SCOP: c.31.1.6
Probab=69.90 E-value=2.7 Score=35.19 Aligned_cols=64 Identities=11% Similarity=0.132 Sum_probs=44.6
Q ss_pred CCcEEEEeCccCCCccchHHHHHHHHHhCCeeeec---HhhHhc-CCCCCCeEec--cCCce------------eCCceE
Q psy9406 195 SAKIVVAGGRGLGSSKNFKILEGLADKLNAAIGAS---RAAVDA-GYISNNLQIG--QTGKI------------VAPQLY 256 (312)
Q Consensus 195 ~A~vvV~~GrG~~~~e~~~~~~~LA~~lga~vg~S---Rp~vd~-gw~~~~~qIG--~sG~~------------v~P~lY 256 (312)
+-.+|++|| - ...+..+.+.+||+. |.=|-.| +-+++. +-.|....+| ..|.. =..+|-
T Consensus 36 kRPvIl~Gg-v-~~~~A~~eL~~~ae~-~iPVvtT~~g~g~~~~~~~~p~~~~~G~~~~g~~~~~~~~~~~~~~~~aDLv 112 (174)
T 1ytl_A 36 KRPLLIVGP-D-MTDEMFERVKKFVEK-DITVVATGSAITRFIDAGLGEKVNYAVLHELTQFLLDPDWKGFDGQGNYDLV 112 (174)
T ss_dssp SSEEEEECS-C-CCHHHHHHHHHHHTS-SSEEEEETTHHHHHHHTTCGGGSEEECHHHHHHHHHSTTCCCTTSSCCCSEE
T ss_pred CCCEEEECC-C-CCccHHHHHHHHHHc-CCCEEEcccccCcCCCCCCCccccccccHHHHHHhhhhhhhhhcccCCCCEE
Confidence 446899999 5 446777888999999 9999887 335555 7767666677 33322 245777
Q ss_pred EEEee
Q psy9406 257 IAIGI 261 (312)
Q Consensus 257 ia~GI 261 (312)
|++|.
T Consensus 113 I~iG~ 117 (174)
T 1ytl_A 113 LMLGS 117 (174)
T ss_dssp EEESC
T ss_pred EEECC
Confidence 77775
No 45
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=58.92 E-value=13 Score=36.32 Aligned_cols=109 Identities=10% Similarity=0.045 Sum_probs=62.8
Q ss_pred cEEEEeCccCCCccchHHHHHHHHHhCCeeeecHhhHhcCCCCC--CeEecc-CC---c-----ee-CCceEEEEeeccc
Q psy9406 197 KIVVAGGRGLGSSKNFKILEGLADKLNAAIGASRAAVDAGYISN--NLQIGQ-TG---K-----IV-APQLYIAIGISGA 264 (312)
Q Consensus 197 ~vvV~~GrG~~~~e~~~~~~~LA~~lga~vg~SRp~vd~gw~~~--~~qIG~-sG---~-----~v-~P~lYia~GISGa 264 (312)
+-+|-+|.|+...+..+.+.+||+++|.-|-+|- .-.|.+|. ...+|. .| . .+ .+++-|++|-.=.
T Consensus 224 rpvIl~G~g~~~~~a~~~l~~lae~~~~Pv~~t~--~~~g~~~~~~p~~~G~~~g~~~~~~~~~~l~~aDlvl~iG~~~~ 301 (565)
T 2nxw_A 224 SPVLMVCVEVRRYGLEAKVAELAQRLGVPVVTTF--MGRGLLADAPTPPLGTYIGVAGDAEITRLVEESDGLFLLGAILS 301 (565)
T ss_dssp SEEEEECHHHHHTTCHHHHHHHHHHHCSCEEECG--GGTTTTTTSSSCCSCBCCGGGSCHHHHHHHHTCSEEEEESCCBC
T ss_pred CCEEEECCCcchhchHHHHHHHHHHhCCCEEECc--ccCccCCCCCCccccccCcccCCHHHHHHHHhCCEEEEECCCcc
Confidence 3455556676545567899999999999998763 33556653 334554 23 2 12 3899999996321
Q ss_pred hhhhc----ccCCCcEEEEEcCCCCCCcccccceEEeecHhHHHHHHHhhh
Q psy9406 265 IQHLS----GMKDSKIIVAINQDEDAPIFDISDYGLVGDLFEIIPKFIKYL 311 (312)
Q Consensus 265 ~qH~~----G~~~s~~IvAIN~D~~ApIf~~aDygiVgD~~~vlp~l~~~l 311 (312)
...+. ... .+.+|-|+.|+.-. .+. +-.--.+.+++.+|.+.+
T Consensus 302 ~~~~~~~~~~~~-~~~~i~i~~d~~~~-~~~--~~~~~~~~~~l~~L~~~l 348 (565)
T 2nxw_A 302 DTNFAVSQRKID-LRKTIHAFDRAVTL-GYH--TYADIPLAGLVDALLERL 348 (565)
T ss_dssp SSTTSBCTTTSC-GGGEEEEETTEEEE-TTE--EEESCCHHHHHHHHHHTS
T ss_pred ccccccccccCC-CCcEEEEeCCceee-CCc--ccCCccHHHHHHHHHHhc
Confidence 11121 122 24577788876522 221 111113457788777654
No 46
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=55.35 E-value=11 Score=36.82 Aligned_cols=108 Identities=13% Similarity=0.078 Sum_probs=65.5
Q ss_pred cEEEEeCccCCCccchHHHHHHHHHhCCeeeecHhhHhcCCCCC--CeEecc-CCc---------eeCCceEEEEeeccc
Q psy9406 197 KIVVAGGRGLGSSKNFKILEGLADKLNAAIGASRAAVDAGYISN--NLQIGQ-TGK---------IVAPQLYIAIGISGA 264 (312)
Q Consensus 197 ~vvV~~GrG~~~~e~~~~~~~LA~~lga~vg~SRp~vd~gw~~~--~~qIG~-sG~---------~v~P~lYia~GISGa 264 (312)
+-+|-+|.|....+..+.+.+||+.+|.-|-+|-- -.|.+|. ...+|. .|. .=.++|-|++|-.=.
T Consensus 213 rpvIl~G~g~~~~~a~~~l~~lae~~~~Pv~~t~~--g~g~~~~~~p~~~G~~~g~~~~~~~~~~l~~aDlvl~iG~~~~ 290 (563)
T 2vk8_A 213 NPVILADACCSRHDVKAETKKLIDLTQFPAFVTPM--GKGSIDEQHPRYGGVYVGTLSKPEVKEAVESADLILSVGALLS 290 (563)
T ss_dssp SEEEEECHHHHHTTCHHHHHHHHHHHCCCEEECTT--TTTSSCTTSTTEEEECCGGGSCHHHHHHHHTCSEEEEESCCCC
T ss_pred CCEEEECcCccccchHHHHHHHHHHhCCCEEECcc--cCccCCCCCCcccccccCccCCHHHHHHHHhCCEEEEECCCCc
Confidence 45666677776556788999999999998887744 3466654 345665 232 126799999995321
Q ss_pred hhhhcc----cCCCcEEEEEcCCCCCC-cccccceEEeecHhHHHHHHHhhh
Q psy9406 265 IQHLSG----MKDSKIIVAINQDEDAP-IFDISDYGLVGDLFEIIPKFIKYL 311 (312)
Q Consensus 265 ~qH~~G----~~~s~~IvAIN~D~~Ap-If~~aDygiVgD~~~vlp~l~~~l 311 (312)
.-.+.+ ..+. .+|-||.|+.-- -+...|+ ++.++|.+|.+.+
T Consensus 291 ~~~~~~~~~~~~~~-~~i~id~d~~~~~~~~~~~~----~~~~~l~~L~~~l 337 (563)
T 2vk8_A 291 DFNTGSFSYSYKTK-NIVEFHSDHMKIRNATFPGV----QMKFVLQKLLTTI 337 (563)
T ss_dssp TTTTTTTCCCCCCS-CEEEECSSEEEETTEEEETC----CHHHHHHHHHHHH
T ss_pred cccccccccCCCCC-eEEEEeCCceEECCcccCCc----CHHHHHHHHHHhh
Confidence 112212 1233 467788887420 0112233 4588888887654
No 47
>1q74_A 1D-MYO-inosityl 2-acetamido-2-deoxy-alpha-D- glucopyranoside deacetylase (MSHB); rossmann fold, zinc aminohydrolase; HET: PE4; 1.70A {Mycobacterium tuberculosis} SCOP: c.134.1.1 PDB: 1q7t_A*
Probab=51.47 E-value=49 Score=29.68 Aligned_cols=87 Identities=10% Similarity=0.114 Sum_probs=48.6
Q ss_pred CEEEEEEeCCCccChHHHHHHHHHHhcCCcEEEEEEcCCc------------------------hHHHHHHhhcCCccEE
Q psy9406 2 PALVIAEHDNSYLKTSTLNTITAATLCSDEIHILIIGYNI------------------------EKVILDAKKVNNIKKI 57 (312)
Q Consensus 2 ~ilv~~E~~~g~l~~~slEll~~A~~Lg~~V~av~~G~~~------------------------~~~a~~~~~~~Gad~V 57 (312)
++|++.=|.+.+..-.. -+|....+-|.+|.++.+-.+. ...+.++.+..|++.+
T Consensus 6 ~vL~v~AHPDDe~l~~g-gtla~~~~~G~~V~vv~lT~Ge~g~~~~~~~~~~~~~~~~~l~~~R~~E~~~A~~~LGv~~~ 84 (303)
T 1q74_A 6 RLLFVHAHPDDESLSNG-ATIAHYTSRGAQVHVVTCTLGEEGEVIGDRWAQLTADHADQLGGYRIGELTAALRALGVSAP 84 (303)
T ss_dssp EEEEEESSTTHHHHHHH-HHHHHHHHTTCEEEEEESCCCTTCCCSSSTTGGGSTTTTCCHHHHHHHHHHHHHHHTTCCCC
T ss_pred eEEEEEeCCchHHHhHH-HHHHHHHHCCCcEEEEEEcCCCCCCCCChhhhccccccHHHHHHHHHHHHHHHHHHhCCCee
Confidence 48888888764311111 2333333336677777765331 1122344456899886
Q ss_pred EEec------CCCCC-----------CCCHHHHHHHHHHHHh--CCcEEEE
Q psy9406 58 LLVD------SLYFS-----------NNLPENIAAQISVIAS--NYSHILA 89 (312)
Q Consensus 58 ~~~~------~~~l~-----------~~~~e~~a~~l~~l~~--~~~~IL~ 89 (312)
+.++ |..+. .+..+...+.|.++++ +|++|+.
T Consensus 85 ~~L~~~~~~~D~~l~~~~~~~~p~~~~~~~~~~~~~l~~~ir~~rP~vV~t 135 (303)
T 1q74_A 85 IYLGGAGRWRDSGMAGTDQRSQRRFVDADPRQTVGALVAIIRELRPHVVVT 135 (303)
T ss_dssp EETTSTTSSBCCCCC----CCSCBGGGSCHHHHHHHHHHHHHHHCCSEEEE
T ss_pred EECCCCCcCCCCCCCCCccccCcccccCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 6664 22221 1245677777777776 6898886
No 48
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=49.14 E-value=1.5e+02 Score=26.79 Aligned_cols=89 Identities=17% Similarity=0.200 Sum_probs=62.1
Q ss_pred hHHHHHHHHHHhcCCcEEEEEEc---C---Cc---hHHHHHHhhcCCccEEEEecCCCCCCCCHHHHHHHHHHHHhCC--
Q psy9406 16 TSTLNTITAATLCSDEIHILIIG---Y---NI---EKVILDAKKVNNIKKILLVDSLYFSNNLPENIAAQISVIASNY-- 84 (312)
Q Consensus 16 ~~slEll~~A~~Lg~~V~av~~G---~---~~---~~~a~~~~~~~Gad~V~~~~~~~l~~~~~e~~a~~l~~l~~~~-- 84 (312)
+...+.+..|++.|.+|..-+.- . +. .+.++++.. +|+|.+.+.|.- ....|+.+.+.+..+.+..
T Consensus 137 ~~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Ga~~i~l~DT~--G~~~P~~v~~lv~~l~~~~p~ 213 (337)
T 3ble_A 137 TDVSFVIEYAIKSGLKINVYLEDWSNGFRNSPDYVKSLVEHLSK-EHIERIFLPDTL--GVLSPEETFQGVDSLIQKYPD 213 (337)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEETHHHHHHHCHHHHHHHHHHHHT-SCCSEEEEECTT--CCCCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHCCCEEEEEEEECCCCCcCCHHHHHHHHHHHHH-cCCCEEEEecCC--CCcCHHHHHHHHHHHHHhcCC
Confidence 34556777888888776654432 1 11 235556665 899999999874 4457888888888886643
Q ss_pred -cEEEEcCCCCcccHHHHHHHHcC
Q psy9406 85 -SHILAPATIYGKNILPRVAALLN 107 (312)
Q Consensus 85 -~~IL~~aT~~GrdLaprlAarL~ 107 (312)
.+=+=.+...|..+|--+|+-..
T Consensus 214 ~~i~~H~Hnd~GlA~AN~laAv~a 237 (337)
T 3ble_A 214 IHFEFHGHNDYDLSVANSLQAIRA 237 (337)
T ss_dssp SCEEEECBCTTSCHHHHHHHHHHT
T ss_pred CeEEEEecCCcchHHHHHHHHHHh
Confidence 35555889999999999888654
No 49
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=47.08 E-value=22 Score=26.19 Aligned_cols=38 Identities=18% Similarity=0.378 Sum_probs=32.6
Q ss_pred CCceeCCceEEEEeeccchhhhcccCCCcEEEEEcCCC
Q psy9406 247 TGKIVAPQLYIAIGISGAIQHLSGMKDSKIIVAINQDE 284 (312)
Q Consensus 247 sG~~v~P~lYia~GISGa~qH~~G~~~s~~IvAIN~D~ 284 (312)
.|....|-+||.-=..|++-+.+|++.-|.|++||.-+
T Consensus 37 ~~~~~~p~~~V~~v~~~spA~~aGl~~GD~I~~ing~~ 74 (107)
T 3qe1_A 37 NGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNGVN 74 (107)
T ss_dssp SSSEESCCEEEEEECTTSHHHHHTCCTTCEEEEETTEE
T ss_pred cccccCCceEEEEECCCCHHHHcCCCCCCEEEEECCEE
Confidence 35666788889888899999999999999999999754
No 50
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=45.32 E-value=60 Score=29.26 Aligned_cols=36 Identities=19% Similarity=0.186 Sum_probs=21.7
Q ss_pred CCEEEEEEeCCCccChHHHHHHHHHHhcCCcEEEEEE
Q psy9406 1 MPALVIAEHDNSYLKTSTLNTITAATLCSDEIHILII 37 (312)
Q Consensus 1 m~ilv~~E~~~g~l~~~slEll~~A~~Lg~~V~av~~ 37 (312)
|+|+++.....|.+++ .+.|..+-++-|-+|.++.-
T Consensus 16 MrIl~~~~~~~gh~~~-~~~La~~L~~~GheV~v~~~ 51 (398)
T 4fzr_A 16 MRILVIAGCSEGFVMP-LVPLSWALRAAGHEVLVAAS 51 (398)
T ss_dssp CEEEEECCSSHHHHGG-GHHHHHHHHHTTCEEEEEEE
T ss_pred eEEEEEcCCCcchHHH-HHHHHHHHHHCCCEEEEEcC
Confidence 7888887665566554 23444444444777776544
No 51
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=45.28 E-value=1.6e+02 Score=25.88 Aligned_cols=87 Identities=15% Similarity=0.001 Sum_probs=58.4
Q ss_pred hHHHHHHHHHHhcCCcEEEEEE---c-----C-Cch---HHHHHHhhcCCccEEEEecCCCCCCCCHHHHHHHHHHHHhC
Q psy9406 16 TSTLNTITAATLCSDEIHILII---G-----Y-NIE---KVILDAKKVNNIKKILLVDSLYFSNNLPENIAAQISVIASN 83 (312)
Q Consensus 16 ~~slEll~~A~~Lg~~V~av~~---G-----~-~~~---~~a~~~~~~~Gad~V~~~~~~~l~~~~~e~~a~~l~~l~~~ 83 (312)
+.+.+.+..|++.|-+|.+-+. | . +.+ +.++.+.+ .|+|.+.+.|.-.. ..|+.+.+.+..+.+.
T Consensus 120 ~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~-~G~d~i~l~Dt~G~--~~P~~~~~lv~~l~~~ 196 (295)
T 1ydn_A 120 ERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFS-LGCHEVSLGDTIGR--GTPDTVAAMLDAVLAI 196 (295)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHH-HTCSEEEEEETTSC--CCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHh-cCCCEEEecCCCCC--cCHHHHHHHHHHHHHh
Confidence 3455667888888877664332 2 1 112 23344444 79999999976443 5799999999988764
Q ss_pred C---cEEEEcCCCCcccHHHHHHHH
Q psy9406 84 Y---SHILAPATIYGKNILPRVAAL 105 (312)
Q Consensus 84 ~---~~IL~~aT~~GrdLaprlAar 105 (312)
. .+.+=++...|..++--+++-
T Consensus 197 ~~~~~l~~H~Hn~~Gla~an~l~Ai 221 (295)
T 1ydn_A 197 APAHSLAGHYHDTGGRALDNIRVSL 221 (295)
T ss_dssp SCGGGEEEEEBCTTSCHHHHHHHHH
T ss_pred CCCCeEEEEECCCcchHHHHHHHHH
Confidence 3 366778888998888766654
No 52
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=42.18 E-value=14 Score=31.38 Aligned_cols=94 Identities=22% Similarity=0.287 Sum_probs=59.5
Q ss_pred CCcEEEEeCccCCCccchHHHHHHHHHhCCeeeecHhhHhcCCCCCCeEeccCCceeCCceEEEEeeccchhhhccc---
Q psy9406 195 SAKIVVAGGRGLGSSKNFKILEGLADKLNAAIGASRAAVDAGYISNNLQIGQTGKIVAPQLYIAIGISGAIQHLSGM--- 271 (312)
Q Consensus 195 ~A~vvV~~GrG~~~~e~~~~~~~LA~~lga~vg~SRp~vd~gw~~~~~qIG~sG~~v~P~lYia~GISGa~qH~~G~--- 271 (312)
.|+.|+-.|.|-. ....++++..|. .+|. ++.-. -+.+.|.+.....=.-++.|++--||-...+.-+
T Consensus 58 ~a~~I~i~G~G~S----~~~A~~~~~~l~-~lg~--~~~~~--~~~~~~~~~~~~~~~~DlvI~iS~SG~t~~~i~~~~~ 128 (220)
T 3etn_A 58 KKGKLVTSGMGKA----GQIAMNIATTFC-STGI--PSVFL--HPSEAQHGDLGILQENDLLLLISNSGKTREIVELTQL 128 (220)
T ss_dssp TCCCEEEECSHHH----HHHHHHHHHHHH-HTTC--CEEEC--CTTGGGBTGGGGCCTTCEEEEECSSSCCHHHHHHHHH
T ss_pred cCCEEEEEEecHH----HHHHHHHHHHHH-hcCC--cEEEe--CCHHHHHhhhccCCCCCEEEEEcCCCCCHHHHHHHHH
Confidence 3899999999954 445666666664 1221 11100 1223333433333344799999999987654321
Q ss_pred -----CCCcEEEEEcCCCCCCcccccceEEee
Q psy9406 272 -----KDSKIIVAINQDEDAPIFDISDYGLVG 298 (312)
Q Consensus 272 -----~~s~~IvAIN~D~~ApIf~~aDygiVg 298 (312)
++++ ||+|=.+++.|+.+.||+-+.-
T Consensus 129 ak~~~~Ga~-vI~IT~~~~s~La~~aD~~l~~ 159 (220)
T 3etn_A 129 AHNLNPGLK-FIVITGNPDSPLASESDVCLST 159 (220)
T ss_dssp HHHHCTTCE-EEEEESCTTSHHHHHSSEEEEC
T ss_pred HHhcCCCCe-EEEEECCCCChhHHhCCEEEEc
Confidence 4555 6688888999999999998865
No 53
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=40.58 E-value=12 Score=36.38 Aligned_cols=105 Identities=9% Similarity=0.105 Sum_probs=63.5
Q ss_pred cEEEEeCccCCCccchHHHHHHHHHhCCeeeecHhhHhcCCCCCC--eEecc-CCc---------eeCCceEEEEeeccc
Q psy9406 197 KIVVAGGRGLGSSKNFKILEGLADKLNAAIGASRAAVDAGYISNN--LQIGQ-TGK---------IVAPQLYIAIGISGA 264 (312)
Q Consensus 197 ~vvV~~GrG~~~~e~~~~~~~LA~~lga~vg~SRp~vd~gw~~~~--~qIG~-sG~---------~v~P~lYia~GISGa 264 (312)
+-++-+|.|+...+..+.+.+||+.+|.-|-+|-- -.|.+|.+ ..+|. .|. .=.+++-|++|-.=.
T Consensus 211 rpvil~G~g~~~~~a~~~l~~lae~~~~Pv~~t~~--~~g~~~~~hp~~~G~~~g~~~~~~~~~~l~~aD~vl~iG~~~~ 288 (552)
T 1ovm_A 211 RTALLADFLVLRHGLKHALQKWVKEVPMAHATMLM--GKGIFDERQAGFYGTYSGSASTGAVKEAIEGADTVLCVGTRFT 288 (552)
T ss_dssp CEEEEECHHHHHTTCHHHHHHHHHHSCCEEEECGG--GTTSSCTTSTTCCCCCCGGGSCHHHHHHHHTSSEEEEESCCCC
T ss_pred CCEEEECcCccccCHHHHHHHHHHHHCCCEEEccc--cCccCCCCCcCeecccCCCCCCHHHHHHHHhCCEEEEECCCCC
Confidence 34555677876556778999999999999977754 44666544 46665 242 135799999995321
Q ss_pred hhhhcc----cCCCcEEEEEcCCCCC--CcccccceEEeecHhHHHHHHHh
Q psy9406 265 IQHLSG----MKDSKIIVAINQDEDA--PIFDISDYGLVGDLFEIIPKFIK 309 (312)
Q Consensus 265 ~qH~~G----~~~s~~IvAIN~D~~A--pIf~~aDygiVgD~~~vlp~l~~ 309 (312)
.-.+.+ ..+.+ +|-||.|+.- +- ...|+ ++.+++.+|.+
T Consensus 289 ~~~~~~~~~~~~~~~-~i~id~d~~~~~~~-~~~~~----~~~~~l~~L~~ 333 (552)
T 1ovm_A 289 DTLTAGFTHQLTPAQ-TIEVQPHAARVGDV-WFTGI----PMNQAIETLVE 333 (552)
T ss_dssp TTTTTTTCCCCCTTT-EEEECSSEEEETTE-EEESC----CHHHHHHHHHH
T ss_pred cccccccccCCCCCe-EEEEeCChheeCCc-ccCCc----cHHHHHHHHHh
Confidence 111112 13344 6678887641 10 11232 44778887765
No 54
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=39.70 E-value=99 Score=26.65 Aligned_cols=80 Identities=14% Similarity=0.147 Sum_probs=46.5
Q ss_pred EEEEEEcCCc--hHHHHHHhhcCCccEEEEecCCCCCC----------------CCHHHHHHHHHHH-------------
Q psy9406 32 IHILIIGYNI--EKVILDAKKVNNIKKILLVDSLYFSN----------------NLPENIAAQISVI------------- 80 (312)
Q Consensus 32 V~av~~G~~~--~~~a~~~~~~~Gad~V~~~~~~~l~~----------------~~~e~~a~~l~~l------------- 80 (312)
-.++++|.+. ...++.++. .|+.++.++|++..+. +-++..++.+.++
T Consensus 29 ~~VlvvG~GglG~~va~~La~-~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 107 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAG-AGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRL 107 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHH-TTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred CcEEEEccCHHHHHHHHHHHH-cCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEeccC
Confidence 3566677543 567777776 8999999998654221 2234444444432
Q ss_pred --------HhCCcEEEEcC-CCCcccHHHHHHHHcCCceee
Q psy9406 81 --------ASNYSHILAPA-TIYGKNILPRVAALLNVMQIS 112 (312)
Q Consensus 81 --------~~~~~~IL~~a-T~~GrdLaprlAarL~~~lva 112 (312)
.+++|+|+-.. +...|.+.-+.+.+.+.|++.
T Consensus 108 ~~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~~p~i~ 148 (251)
T 1zud_1 108 TGEALKDAVARADVVLDCTDNMATRQEINAACVALNTPLIT 148 (251)
T ss_dssp CHHHHHHHHHHCSEEEECCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred CHHHHHHHHhcCCEEEECCCCHHHHHHHHHHHHHhCCCEEE
Confidence 22356665332 333456666666677777664
No 55
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=38.65 E-value=83 Score=28.68 Aligned_cols=104 Identities=7% Similarity=0.048 Sum_probs=53.9
Q ss_pred CCEEEEEEeCCCccChHHHHHHHHHHhc---CCcEEEEEEcCCchHHHHHHhhcCCccEEEEecCCC------------C
Q psy9406 1 MPALVIAEHDNSYLKTSTLNTITAATLC---SDEIHILIIGYNIEKVILDAKKVNNIKKILLVDSLY------------F 65 (312)
Q Consensus 1 m~ilv~~E~~~g~l~~~slEll~~A~~L---g~~V~av~~G~~~~~~a~~~~~~~Gad~V~~~~~~~------------l 65 (312)
|+|++++.-..|.+.+ ++..|+.| |-+|+.+.- +...+. +. ..|.+-+-+-.+.. +
T Consensus 1 MrIli~~~gt~Ghv~p----~~~La~~L~~~Gh~V~v~~~-~~~~~~---v~-~~g~~~~~l~~~~~~~~~~~~~~~~~~ 71 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEP----LVALAARLRELGADARMCLP-PDYVER---CA-EVGVPMVPVGRAVRAGAREPGELPPGA 71 (404)
T ss_dssp -CEEEEEESSHHHHHH----HHHHHHHHHHTTCCEEEEEC-GGGHHH---HH-HTTCCEEECSSCSSGGGSCTTCCCTTC
T ss_pred CeEEEEeCCCCccHHH----HHHHHHHHHHCCCeEEEEeC-HHHHHH---HH-HcCCceeecCCCHHHHhccccCCHHHH
Confidence 8999998766555543 44556665 667766432 222222 22 25765443322211 0
Q ss_pred CCCCHHHHHH---HHHHHHhCCcEEEEcCCCCcccHHHHHHHHcCCceeee
Q psy9406 66 SNNLPENIAA---QISVIASNYSHILAPATIYGKNILPRVAALLNVMQISE 113 (312)
Q Consensus 66 ~~~~~e~~a~---~l~~l~~~~~~IL~~aT~~GrdLaprlAarL~~~lvad 113 (312)
.......... .+.++.+++|+|+.......--.+..+|.++++|+++-
T Consensus 72 ~~~~~~~~~~~~~~l~~~~~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~ 122 (404)
T 3h4t_A 72 AEVVTEVVAEWFDKVPAAIEGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYT 122 (404)
T ss_dssp GGGHHHHHHHHHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEEECCchhhhhhhhhHHhhcCCCEEEE
Confidence 1111122222 23333457999987544333334477899999999843
No 56
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=37.68 E-value=18 Score=35.30 Aligned_cols=110 Identities=15% Similarity=0.164 Sum_probs=65.1
Q ss_pred cEEEEeCccCCCccchHHHHHHHHHhCCeeeecHhhHhcCCCCC--CeEecc----CCc------eeCCceEEEEeeccc
Q psy9406 197 KIVVAGGRGLGSSKNFKILEGLADKLNAAIGASRAAVDAGYISN--NLQIGQ----TGK------IVAPQLYIAIGISGA 264 (312)
Q Consensus 197 ~vvV~~GrG~~~~e~~~~~~~LA~~lga~vg~SRp~vd~gw~~~--~~qIG~----sG~------~v~P~lYia~GISGa 264 (312)
+-++-+|.|+...+..+.+.+||+.+|.-|-+|-. -.|.+|. ...+|. .|. .=.+++-|++|-.=.
T Consensus 230 rpvil~G~g~~~~~a~~~l~~lae~~~~Pv~~t~~--~~g~~~~~~p~~~G~~~g~~~~~~~~~~l~~aDlvl~iG~~~~ 307 (570)
T 2vbf_A 230 KPVVIAGHEVISFGLEKTVTQFVSETKLPITTLNF--GKSAVDESLPSFLGIYNGKLSEISLKNFVESADFILMLGVKLT 307 (570)
T ss_dssp SEEEEECHHHHHTTCHHHHHHHHHHHCCCEEECST--TTTSSCTTSTTEEEECCGGGSCHHHHHHHHHCSEEEEESCCCC
T ss_pred CCEEEECcCccccChHHHHHHHHHHHCCCEEECcc--cCccCCCCCcCccCCcCCCcCCHHHHHHHHhCCEEEEECCCcc
Confidence 35556677776566778999999999998877642 3455653 345654 222 124799999995321
Q ss_pred hhhhccc---CCCcEEEEEcCCCCCCcccccceEEeecHhHHHHHHHhhh
Q psy9406 265 IQHLSGM---KDSKIIVAINQDEDAPIFDISDYGLVGDLFEIIPKFIKYL 311 (312)
Q Consensus 265 ~qH~~G~---~~s~~IvAIN~D~~ApIf~~aDygiVgD~~~vlp~l~~~l 311 (312)
.-.+.+. .....+|-||.|+.- |-+ .+-.--|+.++|.+|.+.+
T Consensus 308 ~~~~~~~~~~~~~~~~i~id~d~~~-~~~--~~~~~~~~~~~l~~L~~~l 354 (570)
T 2vbf_A 308 DSSTGAFTHHLDENKMISLNIDEGI-IFN--KVVEDFDFRAVVSSLSELK 354 (570)
T ss_dssp GGGTTTTCCCCCGGGEEEECSSCEE-ETT--EEECSSCHHHHHHTGGGCC
T ss_pred cccccccccCCCCCeEEEEeCCHHH-hCC--eeecCCCHHHHHHHHHHhc
Confidence 1122221 122346778888741 111 1222236888888887654
No 57
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=37.47 E-value=61 Score=29.03 Aligned_cols=37 Identities=16% Similarity=0.020 Sum_probs=22.4
Q ss_pred HHHHHh--CCcEEEEcCCCCcccHHHHHHHHcCCceeeeEEE
Q psy9406 77 ISVIAS--NYSHILAPATIYGKNILPRVAALLNVMQISEITK 116 (312)
Q Consensus 77 l~~l~~--~~~~IL~~aT~~GrdLaprlAarL~~~lvadv~~ 116 (312)
+.++++ +||+|+.-... -.+..+|.+++.|++.-...
T Consensus 106 l~~~l~~~~PD~Vv~~~~~---~~~~~aa~~~giP~v~~~~~ 144 (391)
T 3tsa_A 106 YLRLAEAWRPSVLLVDVCA---LIGRVLGGLLDLPVVLHRWG 144 (391)
T ss_dssp HHHHHHHHCCSEEEEETTC---HHHHHHHHHTTCCEEEECCS
T ss_pred HHHHHHhcCCCEEEeCcch---hHHHHHHHHhCCCEEEEecC
Confidence 344444 78988874311 22445667799998875543
No 58
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=36.13 E-value=1.5e+02 Score=27.25 Aligned_cols=80 Identities=6% Similarity=-0.025 Sum_probs=47.9
Q ss_pred HHHHHHHhcCCcEEEEEEcCCchHHHHHHhhcCCccEEEEecCCCCCCCCHHHHHHHHHHHHh--CCcEEEEcCCCCccc
Q psy9406 20 NTITAATLCSDEIHILIIGYNIEKVILDAKKVNNIKKILLVDSLYFSNNLPENIAAQISVIAS--NYSHILAPATIYGKN 97 (312)
Q Consensus 20 Ell~~A~~Lg~~V~av~~G~~~~~~a~~~~~~~Gad~V~~~~~~~l~~~~~e~~a~~l~~l~~--~~~~IL~~aT~~Grd 97 (312)
-++.+|+++|-++.++--.++. .+ ....-+|+.+.++. ..+.+.+.+.+.++.+ ..|.|+. .+-..-.
T Consensus 19 ~i~~aa~~lG~~vv~v~~~~~~--~~---~~~~~~d~~~~~~~----~~d~~~~~~~~~~~~~~~~id~V~~-~~e~~~~ 88 (425)
T 3vot_A 19 FIFEEAERLGLKVTFFYNSAED--FP---GNLPAVERCVPLPL----FEDEEAAMDVVRQTFVEFPFDGVMT-LFEPALP 88 (425)
T ss_dssp HHHHHHHHTTCEEEEEEETTSC--CC---CSCTTEEEEEEECT----TTCHHHHHHHHHHHHHHSCCSEEEC-CCGGGHH
T ss_pred HHHHHHHHCCCEEEEEECCCcc--cc---cCHhhccEEEecCC----CCCHHHHHHHHHHhhhhcCCCEEEE-CCchhHH
Confidence 4577899999766555333221 11 11134778777643 2357788888888765 3576663 3344456
Q ss_pred HHHHHHHHcCCc
Q psy9406 98 ILPRVAALLNVM 109 (312)
Q Consensus 98 LaprlAarL~~~ 109 (312)
++.+++.+|+.+
T Consensus 89 ~~a~l~e~lglp 100 (425)
T 3vot_A 89 FTAKAAEALNLP 100 (425)
T ss_dssp HHHHHHHHTTCS
T ss_pred HHHHHHHHcCCC
Confidence 667777777665
No 59
>3hba_A Putative phosphosugar isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE CIT; 2.00A {Shewanella denitrificans OS217}
Probab=36.08 E-value=1e+02 Score=27.82 Aligned_cols=97 Identities=25% Similarity=0.165 Sum_probs=58.3
Q ss_pred CCCcEEEEeCccCCCccchHHHHHHHHHhCCeeeecHhhHhcCCCCCCeEeccCCceeCCceEEEEeeccchhhhccc--
Q psy9406 194 TSAKIVVAGGRGLGSSKNFKILEGLADKLNAAIGASRAAVDAGYISNNLQIGQTGKIVAPQLYIAIGISGAIQHLSGM-- 271 (312)
Q Consensus 194 ~~A~vvV~~GrG~~~~e~~~~~~~LA~~lga~vg~SRp~vd~gw~~~~~qIG~sG~~v~P~lYia~GISGa~qH~~G~-- 271 (312)
.+++.|+-.|.|-..--....-..|-+.+|-.+-+.-|-...-+. ....-+.+|.|++--||-...+.-.
T Consensus 40 ~~~~~I~i~G~G~S~~aa~~~~~~l~~~~g~~v~~~~~~~~~~~~--------~~~~~~~dl~i~iS~SG~T~e~~~a~~ 111 (334)
T 3hba_A 40 FKPKFVMIVGRGSSDHAGVFAKYLFEIEASIPTFAAAPSVASVYG--------KTLKLAGGLVIVISQSGRSPDILAQAR 111 (334)
T ss_dssp HCCSCEEEESSGGGCHHHHHHHHHHHHHHCCCEEECCHHHHHTSC--------CCCCCTTCEEEEEESSSCCHHHHHHHH
T ss_pred CCCCEEEEEEechHHHHHHHHHHHHHHHhCCcEEEEcchHHHHhc--------ccCCCCCCEEEEEeCCCCCHHHHHHHH
Confidence 678999999999543222222222333456444433232211121 1122366899999999976543221
Q ss_pred ----CCCcEEEEEcCCCCCCcccccceEEeec
Q psy9406 272 ----KDSKIIVAINQDEDAPIFDISDYGLVGD 299 (312)
Q Consensus 272 ----~~s~~IvAIN~D~~ApIf~~aDygiVgD 299 (312)
++++ +|+|=++++.|+-+.||+.+.-.
T Consensus 112 ~ak~~g~~-~i~IT~~~~S~la~~ad~~l~~~ 142 (334)
T 3hba_A 112 MAKNAGAF-CVALVNDETAPIKDIVDVVIPLR 142 (334)
T ss_dssp HHHHTTCE-EEEEESCTTSGGGGTSSEEEECC
T ss_pred HHHHcCCc-EEEEeCCCCChHHHhcCEeeeec
Confidence 3444 67888899999999999988643
No 60
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=35.94 E-value=1.1e+02 Score=26.21 Aligned_cols=80 Identities=15% Similarity=0.077 Sum_probs=47.1
Q ss_pred EEEEEEcCCc--hHHHHHHhhcCCccEEEEecCCCCCC----------------CCHHHHHHHHHH--------------
Q psy9406 32 IHILIIGYNI--EKVILDAKKVNNIKKILLVDSLYFSN----------------NLPENIAAQISV-------------- 79 (312)
Q Consensus 32 V~av~~G~~~--~~~a~~~~~~~Gad~V~~~~~~~l~~----------------~~~e~~a~~l~~-------------- 79 (312)
-.++++|.+. ...++.++. .|+.++.++|....+. .-.+..++.+.+
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~-~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 110 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLAS-AGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL 110 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-HTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred CeEEEEeeCHHHHHHHHHHHH-cCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccC
Confidence 3667778654 556777776 7999999998765221 223344433333
Q ss_pred -------HHhCCcEEEEcC-CCCcccHHHHHHHHcCCceee
Q psy9406 80 -------IASNYSHILAPA-TIYGKNILPRVAALLNVMQIS 112 (312)
Q Consensus 80 -------l~~~~~~IL~~a-T~~GrdLaprlAarL~~~lva 112 (312)
+.+++|+|+... +...|.+..+.+.+.+.|++.
T Consensus 111 ~~~~~~~~~~~~DvVi~~~d~~~~~~~l~~~~~~~~~p~i~ 151 (249)
T 1jw9_B 111 DDAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVPLVS 151 (249)
T ss_dssp CHHHHHHHHHTSSEEEECCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred CHhHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHHcCCCEEE
Confidence 223456665543 223456666677777777665
No 61
>3p0f_A Uridine phosphorylase 2; transferase; HET: BAU; 1.54A {Homo sapiens} PDB: 3p0e_A* 2xrf_A
Probab=35.30 E-value=25 Score=31.73 Aligned_cols=50 Identities=22% Similarity=0.308 Sum_probs=36.2
Q ss_pred eCccCCCccchHHHHHHHHHhCCeeeecHhhHhcCCCCCCeEeccCCceeCCceEEEEeeccchhhhcccCCCcEEEE
Q psy9406 202 GGRGLGSSKNFKILEGLADKLNAAIGASRAAVDAGYISNNLQIGQTGKIVAPQLYIAIGISGAIQHLSGMKDSKIIVA 279 (312)
Q Consensus 202 ~GrG~~~~e~~~~~~~LA~~lga~vg~SRp~vd~gw~~~~~qIG~sG~~v~P~lYia~GISGa~qH~~G~~~s~~IvA 279 (312)
.+-|||.+.-=-.++||.+..+ +..++|+..|-+|.+|++| ++--++||+
T Consensus 95 ~~tGiG~psaaI~~~ELi~~~~------------------------~~~~~~~~iIriGtaGgl~----l~vGDvVIa 144 (297)
T 3p0f_A 95 ISHGMGIPSISIMLHELIKLLH------------------------HARCCDVTIIRIGTSGGIG----IAPGTVVIT 144 (297)
T ss_dssp EECCSSHHHHHHHHHHHHHHHH------------------------HTTCBSCEEEEEEEEEESS----SCTTCEEEE
T ss_pred EECCCCHHHHHHHHHHHHHhcc------------------------ccccCcceEEEEEeecccc----ccCCcEEee
Confidence 3456665543347788887765 2335589999999999999 777778875
No 62
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=35.12 E-value=54 Score=29.56 Aligned_cols=36 Identities=11% Similarity=0.111 Sum_probs=22.6
Q ss_pred HHHHHHh--CCcEEEEcCCCCcccHHHHHHHHcCCceeeeE
Q psy9406 76 QISVIAS--NYSHILAPATIYGKNILPRVAALLNVMQISEI 114 (312)
Q Consensus 76 ~l~~l~~--~~~~IL~~aT~~GrdLaprlAarL~~~lvadv 114 (312)
.+.++++ +||+|+.-....+ ++.+|.+++.|++.-.
T Consensus 121 ~l~~~l~~~~pDvVv~~~~~~~---~~~aa~~~giP~v~~~ 158 (412)
T 3otg_A 121 ELQPVIERLRPDLVVQEISNYG---AGLAALKAGIPTICHG 158 (412)
T ss_dssp HHHHHHHHHCCSEEEEETTCHH---HHHHHHHHTCCEEEEC
T ss_pred HHHHHHHhcCCCEEEECchhhH---HHHHHHHcCCCEEEec
Confidence 3444444 7998877533322 5566778999988644
No 63
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=34.70 E-value=45 Score=30.21 Aligned_cols=31 Identities=6% Similarity=-0.182 Sum_probs=21.4
Q ss_pred CCcEEEEcCCCCcccHHHHHHHHcCCceeeeEEE
Q psy9406 83 NYSHILAPATIYGKNILPRVAALLNVMQISEITK 116 (312)
Q Consensus 83 ~~~~IL~~aT~~GrdLaprlAarL~~~lvadv~~ 116 (312)
+||+|+......+ ++.+|.+++.|++.....
T Consensus 130 ~pDlVv~d~~~~~---~~~aA~~~giP~v~~~~~ 160 (398)
T 3oti_A 130 RPDLVVYEQGATV---GLLAADRAGVPAVQRNQS 160 (398)
T ss_dssp CCSEEEEETTCHH---HHHHHHHHTCCEEEECCT
T ss_pred CCCEEEECchhhH---HHHHHHHcCCCEEEEecc
Confidence 6899987433222 667788899999866543
No 64
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=34.36 E-value=2.5e+02 Score=25.05 Aligned_cols=86 Identities=14% Similarity=0.145 Sum_probs=60.0
Q ss_pred HHHHHHHHHhcCCcEEEEE---EcCC-----c-h---HHHHHHhhcCCccEEEEecCCCCCCCCHHHHHHHHHHHHhCC-
Q psy9406 18 TLNTITAATLCSDEIHILI---IGYN-----I-E---KVILDAKKVNNIKKILLVDSLYFSNNLPENIAAQISVIASNY- 84 (312)
Q Consensus 18 slEll~~A~~Lg~~V~av~---~G~~-----~-~---~~a~~~~~~~Gad~V~~~~~~~l~~~~~e~~a~~l~~l~~~~- 84 (312)
..+.+..|++.|.+|.+-+ +|.. . + +.++.+.. +|+|.+++.|.- ....|+.+.+.+..+.+..
T Consensus 124 ~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~Ga~~i~l~DT~--G~~~P~~v~~lv~~l~~~~~ 200 (307)
T 1ydo_A 124 LKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFE-FGISELSLGDTI--GAANPAQVETVLEALLARFP 200 (307)
T ss_dssp HHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHH-HTCSCEEEECSS--CCCCHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHCCCEEEEEEEEEecCCcCCCCCHHHHHHHHHHHHh-cCCCEEEEcCCC--CCcCHHHHHHHHHHHHHhCC
Confidence 4567788888887765433 2211 1 2 34455555 799999999874 3457999999999887653
Q ss_pred --cEEEEcCCCCcccHHHHHHHHc
Q psy9406 85 --SHILAPATIYGKNILPRVAALL 106 (312)
Q Consensus 85 --~~IL~~aT~~GrdLaprlAarL 106 (312)
.+=+=.+...|..+|--+++-.
T Consensus 201 ~~~l~~H~Hnd~Gla~AN~laAv~ 224 (307)
T 1ydo_A 201 ANQIALHFHDTRGTALANMVTALQ 224 (307)
T ss_dssp GGGEEEECBGGGSCHHHHHHHHHH
T ss_pred CCeEEEEECCCCchHHHHHHHHHH
Confidence 3556677899999998888754
No 65
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=33.44 E-value=1.6e+02 Score=26.77 Aligned_cols=98 Identities=15% Similarity=0.180 Sum_probs=57.3
Q ss_pred cChHHHHHHHH---HHhcC-CcEEEEEE--cC-----------Cc-hHHHHHHhhcCCccEEEEecCC--CCCCC-----
Q psy9406 14 LKTSTLNTITA---ATLCS-DEIHILII--GY-----------NI-EKVILDAKKVNNIKKILLVDSL--YFSNN----- 68 (312)
Q Consensus 14 l~~~slEll~~---A~~Lg-~~V~av~~--G~-----------~~-~~~a~~~~~~~Gad~V~~~~~~--~l~~~----- 68 (312)
.++.-.||+-. +|+.+ ..+++++- |+ .. .....++....|+|+|+.+|-. +.+.|
T Consensus 63 ~nd~lmeLl~~idA~k~asA~rIt~ViPY~~YaRQDr~~~~repisak~vA~lL~~~G~drvit~DlH~~qiqgfF~ipv 142 (326)
T 3s5j_B 63 INDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGADHIITMDLHASQIQGFFDIPV 142 (326)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEEESSCTTTTCCSCTTSSCCCHHHHHHHHHHHHTCSEEEEESCSSGGGGGGCSSCE
T ss_pred ccHHHHHHHHHHHHHHhcCCcEEEEeccCccccccCCcCCCCCCEeHHHHHHHHHHcCCCEEEEEeCCChHHHhhcCCce
Confidence 45556676644 45553 57777754 21 11 1222334434799999999742 22222
Q ss_pred ---C-HHHHHHHHHHHHhC-CcEEEEcCCCCcccHHHHHHHHcCCcee
Q psy9406 69 ---L-PENIAAQISVIASN-YSHILAPATIYGKNILPRVAALLNVMQI 111 (312)
Q Consensus 69 ---~-~e~~a~~l~~l~~~-~~~IL~~aT~~GrdLaprlAarL~~~lv 111 (312)
. ...+++-+.+-..+ .+.++++-..-|-..+..+|.+|+.++.
T Consensus 143 d~l~a~p~l~~~i~~~~~~~~~~vVVspd~Ggv~~A~~lA~~L~~~~~ 190 (326)
T 3s5j_B 143 DNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTSIADRLNVDFA 190 (326)
T ss_dssp EEECSHHHHHHHHHHHCTTGGGCEEEESSGGGHHHHHHHHHHHTCEEE
T ss_pred eceEcHHHHHHHHHHhcCcCCCcEEEEECCCchHHHHHHHHHcCCCEE
Confidence 1 22234444332222 2578888888899999999999998753
No 66
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=33.38 E-value=31 Score=31.24 Aligned_cols=26 Identities=19% Similarity=0.239 Sum_probs=22.0
Q ss_pred EEEEcCCCCCCcccccceEEeecHhH
Q psy9406 277 IVAINQDEDAPIFDISDYGLVGDLFE 302 (312)
Q Consensus 277 IvAIN~D~~ApIf~~aDygiVgD~~~ 302 (312)
+|++|.||++|-+++||-.++-|...
T Consensus 27 vv~vd~~~~~~~~~~aD~~~~~~~~~ 52 (363)
T 4ffl_A 27 VVLVDKNPQALIRNYADEFYCFDVIK 52 (363)
T ss_dssp EEEEESCTTCTTTTTSSEEEECCTTT
T ss_pred EEEEeCCCCChhHhhCCEEEECCCCc
Confidence 77899999999999999877766543
No 67
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=33.36 E-value=1.9e+02 Score=25.04 Aligned_cols=83 Identities=11% Similarity=0.059 Sum_probs=51.8
Q ss_pred HHHHHHHHHhcCCcEEEEEEcCCc-hHHHHHHhhcCCccEEEEecCCCCCCCCHHHHHHHHHHHHhCCcEEEEcCC----
Q psy9406 18 TLNTITAATLCSDEIHILIIGYNI-EKVILDAKKVNNIKKILLVDSLYFSNNLPENIAAQISVIASNYSHILAPAT---- 92 (312)
Q Consensus 18 slEll~~A~~Lg~~V~av~~G~~~-~~~a~~~~~~~Gad~V~~~~~~~l~~~~~e~~a~~l~~l~~~~~~IL~~aT---- 92 (312)
-..++.+++++ ++..+++|.+. .+..+++.+..| ++|..... ...+.+. ++....|++++|+.
T Consensus 177 ~~~li~a~~~~--~~~l~i~G~g~~~~~l~~~~~~~~-~~v~~~g~-----~~~~~l~----~~~~~adv~v~ps~~~~~ 244 (342)
T 2iuy_A 177 ALEAAAFAHAC--GRRLVLAGPAWEPEYFDEITRRYG-STVEPIGE-----VGGERRL----DLLASAHAVLAMSQAVTG 244 (342)
T ss_dssp HHHHHHHHHHH--TCCEEEESCCCCHHHHHHHHHHHT-TTEEECCC-----CCHHHHH----HHHHHCSEEEECCCCCCC
T ss_pred HHHHHHHHHhc--CcEEEEEeCcccHHHHHHHHHHhC-CCEEEecc-----CCHHHHH----HHHHhCCEEEECCccccc
Confidence 34667777777 56778888754 344445554456 67766421 1222333 33345689999987
Q ss_pred ------CCcccHHHHHHHHcCCceee
Q psy9406 93 ------IYGKNILPRVAALLNVMQIS 112 (312)
Q Consensus 93 ------~~GrdLaprlAarL~~~lva 112 (312)
..|--+..-=|...|.|+++
T Consensus 245 ~~~~~~~E~~~~~~~EAma~G~PvI~ 270 (342)
T 2iuy_A 245 PWGGIWCEPGATVVSEAAVSGTPVVG 270 (342)
T ss_dssp TTCSCCCCCCCHHHHHHHHTTCCEEE
T ss_pred ccccccccCccHHHHHHHhcCCCEEE
Confidence 56666777777788888774
No 68
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=33.16 E-value=89 Score=22.88 Aligned_cols=41 Identities=12% Similarity=0.177 Sum_probs=24.2
Q ss_pred CCEEEEEEeC--CCccChHHHHHHHHHHhc-CC-cEEEEEEcCCc
Q psy9406 1 MPALVIAEHD--NSYLKTSTLNTITAATLC-SD-EIHILIIGYNI 41 (312)
Q Consensus 1 m~ilv~~E~~--~g~l~~~slEll~~A~~L-g~-~V~av~~G~~~ 41 (312)
|+++++.-+. +..-....+.+...+.+. +. +|.+++.|++.
T Consensus 2 ~k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g~~~v~vff~~dgV 46 (117)
T 1jx7_A 2 QKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSDAV 46 (117)
T ss_dssp CEEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEEECGGGG
T ss_pred cEEEEEEcCCCCCcHHHHHHHHHHHHHHhcCCCccEEEEEEchHH
Confidence 2566666543 212222345555556666 77 89999888764
No 69
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=33.10 E-value=1.1e+02 Score=22.69 Aligned_cols=82 Identities=20% Similarity=0.279 Sum_probs=54.5
Q ss_pred cEEEEeCccCCCccch-HHHHHHHHHhCCeeeecHhhHhcCCCCCCeEeccCCceeCCceEEEEeeccchhhhcccCCCc
Q psy9406 197 KIVVAGGRGLGSSKNF-KILEGLADKLNAAIGASRAAVDAGYISNNLQIGQTGKIVAPQLYIAIGISGAIQHLSGMKDSK 275 (312)
Q Consensus 197 ~vvV~~GrG~~~~e~~-~~~~~LA~~lga~vg~SRp~vd~gw~~~~~qIG~sG~~v~P~lYia~GISGa~qH~~G~~~s~ 275 (312)
++++++|-|+++- -+ +.+++.++.+|=.+ + .-+++++...++ +.+.|
T Consensus 6 kIlvvC~~G~~TS-ll~~kl~~~~~~~gi~~---------------------------~-i~~~~~~~~~~~---~~~~D 53 (109)
T 2l2q_A 6 NILLVCGAGMSTS-MLVQRIEKYAKSKNINA---------------------------T-IEAIAETRLSEV---VDRFD 53 (109)
T ss_dssp EEEEESSSSCSSC-HHHHHHHHHHHHHTCSE---------------------------E-EEEECSTTHHHH---TTTCS
T ss_pred EEEEECCChHhHH-HHHHHHHHHHHHCCCCe---------------------------E-EEEecHHHHHhh---cCCCC
Confidence 5899999999986 22 56666666654211 1 246677776665 46788
Q ss_pred EEEEEcCC-------------CCCCc--ccccceEEeecHhHHHHHHHhhh
Q psy9406 276 IIVAINQD-------------EDAPI--FDISDYGLVGDLFEIIPKFIKYL 311 (312)
Q Consensus 276 ~IvAIN~D-------------~~ApI--f~~aDygiVgD~~~vlp~l~~~l 311 (312)
+|+.-..= .+-|+ ...-+|| .-|-.+++..+.+.|
T Consensus 54 ~Ii~t~~l~~~~~~~~~~~~~~~~pv~~I~~~~y~-~~d~~~vl~~i~~~l 103 (109)
T 2l2q_A 54 VVLLAPQSRFNKKRLEEITKPKGIPIEIINTIDYG-TMNGEKVLQLAINAF 103 (109)
T ss_dssp EEEECSCCSSHHHHHHHHHHHHTCCEEECCHHHHH-HTCHHHHHHHHHHHH
T ss_pred EEEECCccHHHHHHHHHHhcccCCCEEEEChHHhc-cCCHHHHHHHHHHHH
Confidence 87764432 25788 5566787 568888888887765
No 70
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=32.69 E-value=2.2e+02 Score=25.70 Aligned_cols=97 Identities=14% Similarity=0.150 Sum_probs=57.5
Q ss_pred ChHHHHHHHH---HHhcC-CcEEEEEE--cC-----------C-c-hHHHHHHhhcCCccEEEEecCC--CCCCCCH---
Q psy9406 15 KTSTLNTITA---ATLCS-DEIHILII--GY-----------N-I-EKVILDAKKVNNIKKILLVDSL--YFSNNLP--- 70 (312)
Q Consensus 15 ~~~slEll~~---A~~Lg-~~V~av~~--G~-----------~-~-~~~a~~~~~~~Gad~V~~~~~~--~l~~~~~--- 70 (312)
++.-.||+-. +|+.+ ..+++++- |+ . . .....++....|+|+|+.+|-. +.+.|..
T Consensus 68 nd~lmeLl~~idA~k~asA~rIt~ViPY~~YaRQDr~~~~~r~pisak~vA~ll~~~G~d~vit~DlH~~qiqgfF~ipv 147 (319)
T 3dah_A 68 NDNLMELMIMVDALKRASAGRITAAIPYFGYARQDRRPRSARVAISAKVVANMLEIAGVERIITMDLHADQIQGFFDIPV 147 (319)
T ss_dssp HHHHHHHHHHHHHHHHTTBSEEEEEESSCTTTTCCSCCTTCCCCCHHHHHHHHHHHHTCCEEEEESCSCGGGGGGCSSCE
T ss_pred cHHHHHHHHHHHHHHHcCCcEEEEEccCccccccccccCCCCCCccHHHHHHHHHhcCCCEEEEEECCChHHhhhcCCce
Confidence 4556676644 45554 57777763 21 1 1 1222334434799999999742 2232210
Q ss_pred H--HHHHHHHHHHhC---CcEEEEcCCCCcccHHHHHHHHcCCcee
Q psy9406 71 E--NIAAQISVIASN---YSHILAPATIYGKNILPRVAALLNVMQI 111 (312)
Q Consensus 71 e--~~a~~l~~l~~~---~~~IL~~aT~~GrdLaprlAarL~~~lv 111 (312)
+ ...+.+.+.+++ .+.++++-..-|-..|..+|.+|+.++.
T Consensus 148 d~l~a~p~l~~~i~~~~~~~~vVVspd~Ggv~~A~~lA~~L~~p~~ 193 (319)
T 3dah_A 148 DNIYATPILLGDLRKQNYPDLLVVSPDVGGVVRARALAKQLNCDLA 193 (319)
T ss_dssp EEECCHHHHHHHHHTTCCTTEEEECCSSTTHHHHHHHHHHTTCEEE
T ss_pred EecccHHHHHHHHHHhCCCCcEEEEeCCCccHHHHHHHHHhCCCEE
Confidence 0 113344444332 2688888889999999999999998753
No 71
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=32.58 E-value=32 Score=24.17 Aligned_cols=28 Identities=21% Similarity=0.411 Sum_probs=21.1
Q ss_pred ceEEEEeeccchhhhcccCCCcEEEEEcCC
Q psy9406 254 QLYIAIGISGAIQHLSGMKDSKIIVAINQD 283 (312)
Q Consensus 254 ~lYia~GISGa~qH~~G~~~s~~IvAIN~D 283 (312)
-+++.. +.|++-+ +|++.-|.|++||.-
T Consensus 28 ~~~v~~-v~~spA~-aGl~~GD~I~~vng~ 55 (88)
T 3bpu_A 28 GQRVKQ-IVDSPRS-RGLKEGDLIVEVNKK 55 (88)
T ss_dssp SEEEEE-CCC--CC-TTCCTTCEEEEETTE
T ss_pred cEEEEE-ecCChhH-hCCCCCCEEEEECCE
Confidence 355655 6788888 999999999999974
No 72
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=32.34 E-value=2.6e+02 Score=24.57 Aligned_cols=87 Identities=15% Similarity=0.124 Sum_probs=60.7
Q ss_pred HHHHHHHHHHhcCCcEEEEEE---c-----C-Cch---HHHHHHhhcCCccEEEEecCCCCCCCCHHHHHHHHHHHHhCC
Q psy9406 17 STLNTITAATLCSDEIHILII---G-----Y-NIE---KVILDAKKVNNIKKILLVDSLYFSNNLPENIAAQISVIASNY 84 (312)
Q Consensus 17 ~slEll~~A~~Lg~~V~av~~---G-----~-~~~---~~a~~~~~~~Gad~V~~~~~~~l~~~~~e~~a~~l~~l~~~~ 84 (312)
...+.+..|++.|.+|.+-+. | . +.+ +.++.+.. +|+|.+.+.|.- ....|+.+.+.+..+.+..
T Consensus 122 ~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~Ga~~i~l~DT~--G~~~P~~~~~lv~~l~~~~ 198 (298)
T 2cw6_A 122 RFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYS-MGCYEISLGDTI--GVGTPGIMKDMLSAVMQEV 198 (298)
T ss_dssp HHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHH-TTCSEEEEEETT--SCCCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHH-cCCCEEEecCCC--CCcCHHHHHHHHHHHHHhC
Confidence 445677788888877765443 2 1 112 34455555 799999999874 4467999999888886643
Q ss_pred ---cEEEEcCCCCcccHHHHHHHHc
Q psy9406 85 ---SHILAPATIYGKNILPRVAALL 106 (312)
Q Consensus 85 ---~~IL~~aT~~GrdLaprlAarL 106 (312)
.+=+=.+...|..+|--+++-.
T Consensus 199 ~~~~i~~H~Hn~~Gla~An~laA~~ 223 (298)
T 2cw6_A 199 PLAALAVHCHDTYGQALANTLMALQ 223 (298)
T ss_dssp CGGGEEEEEBCTTSCHHHHHHHHHH
T ss_pred CCCeEEEEECCCCchHHHHHHHHHH
Confidence 3666678899999998777754
No 73
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=32.20 E-value=2.7e+02 Score=25.05 Aligned_cols=90 Identities=8% Similarity=-0.083 Sum_probs=61.1
Q ss_pred hHHHHHHHHHHhcCCcEEEEEE-cCC-c----hHHHHHHhhcCCccEEEEecCCCCCCCCHHHHHHHHHHHHhCC--c--
Q psy9406 16 TSTLNTITAATLCSDEIHILII-GYN-I----EKVILDAKKVNNIKKILLVDSLYFSNNLPENIAAQISVIASNY--S-- 85 (312)
Q Consensus 16 ~~slEll~~A~~Lg~~V~av~~-G~~-~----~~~a~~~~~~~Gad~V~~~~~~~l~~~~~e~~a~~l~~l~~~~--~-- 85 (312)
+...+.+..|++.|-.+...+. ... . .+.++.+.. +|++.|.+.|.-.. ..|+.+.+.+..+.+.. +
T Consensus 120 ~~~~~~i~~ak~~G~~v~~~~~~a~~~~~e~~~~ia~~~~~-~Ga~~i~l~DT~G~--~~P~~v~~lv~~l~~~~~~~~p 196 (345)
T 1nvm_A 120 DVSKQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMES-YGATCIYMADSGGA--MSMNDIRDRMRAFKAVLKPETQ 196 (345)
T ss_dssp GGGHHHHHHHHHHTCEEEEEEESTTSSCHHHHHHHHHHHHH-HTCSEEEEECTTCC--CCHHHHHHHHHHHHHHSCTTSE
T ss_pred HHHHHHHHHHHHCCCEEEEEEEeCCCCCHHHHHHHHHHHHH-CCCCEEEECCCcCc--cCHHHHHHHHHHHHHhcCCCce
Confidence 4567888899998876666542 221 1 234455554 79999999887544 35888888888876533 4
Q ss_pred EEEEcCCCCcccHHHHHHHHcCC
Q psy9406 86 HILAPATIYGKNILPRVAALLNV 108 (312)
Q Consensus 86 ~IL~~aT~~GrdLaprlAarL~~ 108 (312)
+-+=.+...|..+|--+++....
T Consensus 197 i~~H~Hn~~G~avAn~laA~~aG 219 (345)
T 1nvm_A 197 VGMHAHHNLSLGVANSIVAVEEG 219 (345)
T ss_dssp EEEECBCTTSCHHHHHHHHHHTT
T ss_pred EEEEECCCccHHHHHHHHHHHcC
Confidence 33347788899999888886543
No 74
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=30.65 E-value=2.3e+02 Score=26.22 Aligned_cols=97 Identities=9% Similarity=0.075 Sum_probs=58.1
Q ss_pred cChHHHHHHHH---HHhcC-CcEEEEE--EcCCc-----------hHHHHHHhhcCCccEEEEecCC--CCCCC------
Q psy9406 14 LKTSTLNTITA---ATLCS-DEIHILI--IGYNI-----------EKVILDAKKVNNIKKILLVDSL--YFSNN------ 68 (312)
Q Consensus 14 l~~~slEll~~---A~~Lg-~~V~av~--~G~~~-----------~~~a~~~~~~~Gad~V~~~~~~--~l~~~------ 68 (312)
.++.-.||+-. +|+.+ ..+++++ +|... .....++....|+|+|+.++-. ..+.|
T Consensus 92 ~nd~lmeLl~~idA~k~asA~rit~ViPY~~YaRQdr~~~r~~i~ak~vA~lL~~aGad~vit~DlHs~q~qgfF~ipvD 171 (379)
T 2ji4_A 92 VNTTIMELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMRKRGSIVSKLLASMMCKAGLTHLITMDLHQKEIQGFFNIPVD 171 (379)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEECSSCSSCCC-------CCHHHHHHHHHHHTTCCEEEEESCSSGGGGGGSSSCEE
T ss_pred ccHHHHHHHHHHHHHHhcCCceEEEEEeccCccccccccCCCcHHHHHHHHHHHHcCCCEEEEecCCChhhccccCCcee
Confidence 45666777755 34443 4677664 33321 1222233434899999998742 22222
Q ss_pred ---CHHHHHHHHHHHHhC-CcEEEEcCCCCcccHHHHHHHHcCCce
Q psy9406 69 ---LPENIAAQISVIASN-YSHILAPATIYGKNILPRVAALLNVMQ 110 (312)
Q Consensus 69 ---~~e~~a~~l~~l~~~-~~~IL~~aT~~GrdLaprlAarL~~~l 110 (312)
....+++.|.+...+ .+.++++-..-|--+|..+|.+|+.|+
T Consensus 172 ~l~A~p~La~~I~~~~~~~~~~vVV~pd~GGv~~A~~lA~~L~~pl 217 (379)
T 2ji4_A 172 NLRASPFLLQYIQEEIPDYRNAVIVAKSPASAKRAQSFAERLRLGI 217 (379)
T ss_dssp EECCHHHHHHHHHHHSTTGGGEEEEESSGGGHHHHHHHHHHTTCEE
T ss_pred eeccHHHHHHHHHHhcccCCCcEEEEEccchHHHHHHHHHHhCCCE
Confidence 122344444443212 257888888889999999999999986
No 75
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=29.24 E-value=40 Score=26.92 Aligned_cols=40 Identities=18% Similarity=0.322 Sum_probs=32.4
Q ss_pred eccCCceeCCceEEEEeeccchhhhcccCCCcEEEEEcCC
Q psy9406 244 IGQTGKIVAPQLYIAIGISGAIQHLSGMKDSKIIVAINQD 283 (312)
Q Consensus 244 IG~sG~~v~P~lYia~GISGa~qH~~G~~~s~~IvAIN~D 283 (312)
+|.+-+.....+||.-=..|++-+.+|++.-|.|++||.-
T Consensus 18 lG~~~~~~~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~ 57 (166)
T 1w9e_A 18 IGLRLKSIDNGIFVQLVQANSPASLVGLRFGDQVLQINGE 57 (166)
T ss_dssp CSEEEEEETTEEEEEEECTTSHHHHTTCCTTCEEEEETTE
T ss_pred EeEEEEeCCCCEEEEEECCCChHHHcCCCCCCEEEEECCE
Confidence 4555445556788887788999999999999999999964
No 76
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=29.21 E-value=15 Score=29.89 Aligned_cols=95 Identities=15% Similarity=0.150 Sum_probs=56.0
Q ss_pred CCCCcEEEEeCccCCCccchHHHHHHHHHh---CCeeeecHhhHhcCCCCCCeEeccCCceeCCceEEEEeeccchhhhc
Q psy9406 193 LTSAKIVVAGGRGLGSSKNFKILEGLADKL---NAAIGASRAAVDAGYISNNLQIGQTGKIVAPQLYIAIGISGAIQHLS 269 (312)
Q Consensus 193 l~~A~vvV~~GrG~~~~e~~~~~~~LA~~l---ga~vg~SRp~vd~gw~~~~~qIG~sG~~v~P~lYia~GISGa~qH~~ 269 (312)
|.+|+.|+..|.|-. ....+.++..| |-.+=+. .. +.+.+..+....=.-++.|++--||-...+.
T Consensus 36 i~~a~~I~i~G~G~S----~~~a~~~~~~l~~~g~~~~~~----~~---~~~~~~~~~~~~~~~d~~i~iS~sG~t~~~~ 104 (187)
T 3sho_A 36 ICRADHVIVVGMGFS----AAVAVFLGHGLNSLGIRTTVL----TE---GGSTLTITLANLRPTDLMIGVSVWRYLRDTV 104 (187)
T ss_dssp HHHCSEEEEECCGGG----HHHHHHHHHHHHHTTCCEEEE----CC---CTHHHHHHHHTCCTTEEEEEECCSSCCHHHH
T ss_pred HHhCCEEEEEecCch----HHHHHHHHHHHHhcCCCEEEe----cC---CchhHHHHHhcCCCCCEEEEEeCCCCCHHHH
Confidence 567889999999853 34555555555 2211110 00 0111111121222347999999999765432
Q ss_pred c------cCCCcEEEEEcCCCCCCcccccceEEeec
Q psy9406 270 G------MKDSKIIVAINQDEDAPIFDISDYGLVGD 299 (312)
Q Consensus 270 G------~~~s~~IvAIN~D~~ApIf~~aDygiVgD 299 (312)
- =++++ ||+|=.+++.|+-+.||+-+.-.
T Consensus 105 ~~~~~ak~~g~~-vi~IT~~~~s~l~~~ad~~l~~~ 139 (187)
T 3sho_A 105 AALAGAAERGVP-TMALTDSSVSPPARIADHVLVAA 139 (187)
T ss_dssp HHHHHHHHTTCC-EEEEESCTTSHHHHHCSEEEECC
T ss_pred HHHHHHHHCCCC-EEEEeCCCCCcchhhCcEEEEec
Confidence 1 23444 67888889999999999988643
No 77
>1j5x_A Glucosamine-6-phosphate deaminase; structural genomics, TM0813, glucosamine-6-phosphate deamina PSI, protein structure initiative; 1.80A {Thermotoga maritima} SCOP: c.80.1.1
Probab=29.20 E-value=25 Score=32.09 Aligned_cols=98 Identities=14% Similarity=0.070 Sum_probs=53.6
Q ss_pred CCCCCcEEEEeCccCCCccchHHHHHHHHH-hCCeeeecHhhHhcCCCCCCeEeccCCceeCCceEEEEeeccchhhhcc
Q psy9406 192 ELTSAKIVVAGGRGLGSSKNFKILEGLADK-LNAAIGASRAAVDAGYISNNLQIGQTGKIVAPQLYIAIGISGAIQHLSG 270 (312)
Q Consensus 192 ~l~~A~vvV~~GrG~~~~e~~~~~~~LA~~-lga~vg~SRp~vd~gw~~~~~qIG~sG~~v~P~lYia~GISGa~qH~~G 270 (312)
.+.+++.|+-.|.|-..--. ..+..+-.. +|-.+-+-.+-.. -+.+ ..+. . .|+|.|++--||-...+.-
T Consensus 48 ~l~~~~~I~i~G~G~S~~~a-~~~~~~l~~~~g~~v~~~~~~~~-~~~~--~~~~--~---~~dlvI~iS~SG~T~e~l~ 118 (342)
T 1j5x_A 48 QKNLTDEVLFVGCGSSYNLA-LTISYYFERVLKIRTKAIPAGEV-AFQK--IPDL--E---ERGLAFLFSRTGNTTEVLL 118 (342)
T ss_dssp ----CCEEEEEESTHHHHHH-HHHHHHHHHHHCCEEEEEEHHHH-HTTC--SCCC--C---SSEEEEEECSSSCCHHHHH
T ss_pred HhCCCCEEEEEEchHHHHHH-HHHHHHHHHhhCCeEEEECchHH-HhcC--cccC--C---CCeEEEEEcCCCCCHHHHH
Confidence 46778999999988432111 122222222 4543333222211 1111 1111 0 1579999999997664432
Q ss_pred -c-----CCCcEEEEEcCCCCCCcccccceEEeec
Q psy9406 271 -M-----KDSKIIVAINQDEDAPIFDISDYGLVGD 299 (312)
Q Consensus 271 -~-----~~s~~IvAIN~D~~ApIf~~aDygiVgD 299 (312)
+ +++ .+|+|=++++.|+-+.||+.+.-.
T Consensus 119 a~~~ak~~Ga-~vIaIT~~~~S~La~~ad~~l~~~ 152 (342)
T 1j5x_A 119 ANDVLKKRNH-RTIGITIEEESRLAKESDLPLVFP 152 (342)
T ss_dssp HHHHHHHTTE-EEEEEESCTTSHHHHHSSEEEECC
T ss_pred HHHHHHHCCC-CEEEEECCCCCHHHHhcCEEEEcC
Confidence 1 123 478898899999999999988654
No 78
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=29.13 E-value=2.3e+02 Score=24.48 Aligned_cols=104 Identities=14% Similarity=0.062 Sum_probs=55.1
Q ss_pred CCEEEEEEeCCCccChHHHHHHHHHHhcCCcEEEEEE--cCC---------chHHHHHHhhcCCccEEEEecCCCCCCCC
Q psy9406 1 MPALVIAEHDNSYLKTSTLNTITAATLCSDEIHILII--GYN---------IEKVILDAKKVNNIKKILLVDSLYFSNNL 69 (312)
Q Consensus 1 m~ilv~~E~~~g~l~~~slEll~~A~~Lg~~V~av~~--G~~---------~~~~a~~~~~~~Gad~V~~~~~~~l~~~~ 69 (312)
|++.|.. .+|. +.++-+. .+++-|-+|.+++. +.. ..+.++..+...|.. .+.++-+.-..-.
T Consensus 5 MKvvvl~--SGGk--DSs~al~-~l~~~G~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIp-l~~v~~~g~~~~e 78 (237)
T 3rjz_A 5 ADVAVLY--SGGK--DSNYALY-WAIKNRFSVKFLVTMVSENEESYMYHTINANLTDLQARALGIP-LVKGFTQGEKEKE 78 (237)
T ss_dssp SEEEEEC--CSSH--HHHHHHH-HHHHTTCEEEEEEEEECC--------CCSSSHHHHHHHHHTCC-EEEEEC------C
T ss_pred CEEEEEe--cCcH--HHHHHHH-HHHHcCCeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCC-EEEEECCCCchHH
Confidence 4544443 4553 5555443 45666777877642 221 112334444446874 4555433211112
Q ss_pred HHHHHHHHHHHHhCCcEEEEcC--CCCcccHHHHHHHHcCCceee
Q psy9406 70 PENIAAQISVIASNYSHILAPA--TIYGKNILPRVAALLNVMQIS 112 (312)
Q Consensus 70 ~e~~a~~l~~l~~~~~~IL~~a--T~~GrdLaprlAarL~~~lva 112 (312)
.+.+.+++.++ +.+.+.+|+ +..=|.--.+++.++|.-+++
T Consensus 79 ~e~l~~~l~~~--~i~~vv~Gdi~s~yqr~r~e~vc~~~gl~~~~ 121 (237)
T 3rjz_A 79 VEDLKRVLSGL--KIQGIVAGALASKYQRKRIEKVAKELGLEVYT 121 (237)
T ss_dssp HHHHHHHHTTS--CCSEEECC---CCSHHHHHHHHHHHTTCEEEC
T ss_pred HHHHHHHHHhc--CCcEEEECCcchHHHHHHHHHHHHHcCCEEEc
Confidence 33343444332 467888888 455688889999999987776
No 79
>3ga2_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Bacillus subtilis}
Probab=29.09 E-value=41 Score=29.59 Aligned_cols=65 Identities=17% Similarity=0.342 Sum_probs=47.8
Q ss_pred CCcEEEEeCccCCCccchHHHHHHHHHhC-CeeeecHh-hH-hcC-CCC-------------CCeEecc---CCceeCCc
Q psy9406 195 SAKIVVAGGRGLGSSKNFKILEGLADKLN-AAIGASRA-AV-DAG-YIS-------------NNLQIGQ---TGKIVAPQ 254 (312)
Q Consensus 195 ~A~vvV~~GrG~~~~e~~~~~~~LA~~lg-a~vg~SRp-~v-d~g-w~~-------------~~~qIG~---sG~~v~P~ 254 (312)
+-|+++.=|.|+-.+..|.++--|--.|| -+||+.+- .+ |-+ +-+ ...+||. |++.++|
T Consensus 109 ~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVAKs~L~~~g~~~~~~~~~~g~~~~l~~~ge~vG~vlRt~~~~kP- 187 (246)
T 3ga2_A 109 EPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIAKTYLKIKGCDFVTPEIEVGAYTDIIIDGEVYGRALRTRRDVKP- 187 (246)
T ss_dssp CCSCEEEEBCSSSSTTSCCHHHHHHHHHTSCEEEEESSCCCCTTCCCCCCCSSTTCEEEEEETTEEEEEEECSSTTSCC-
T ss_pred CCCEEEEcCcEEecCCCcchhheeeeecCCCEEeeeccccccCCccccCccccCCceeeeccCCEEEEEEEEeCCCCCC-
Confidence 46899999999999999999988888887 68998665 33 211 211 3456664 5666665
Q ss_pred eEEEEe
Q psy9406 255 LYIAIG 260 (312)
Q Consensus 255 lYia~G 260 (312)
||+..|
T Consensus 188 lyVS~G 193 (246)
T 3ga2_A 188 IFLSCG 193 (246)
T ss_dssp EEEEEE
T ss_pred EEEecc
Confidence 999998
No 80
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=28.68 E-value=48 Score=23.72 Aligned_cols=35 Identities=17% Similarity=0.206 Sum_probs=28.1
Q ss_pred ceeCCceEEEEeeccchhhhcccCCCcEEEEEcCC
Q psy9406 249 KIVAPQLYIAIGISGAIQHLSGMKDSKIIVAINQD 283 (312)
Q Consensus 249 ~~v~P~lYia~GISGa~qH~~G~~~s~~IvAIN~D 283 (312)
....+.+||.-=..|++-+.+|++--|.|++||.-
T Consensus 33 ~~~~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~ 67 (96)
T 2ego_A 33 QRVEMVTFVARVHESSPAQLAGLTPGDTIASVNGL 67 (96)
T ss_dssp --CCEEEEEEEECTTCHHHHTTCCTTCEEEEETTE
T ss_pred CCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCE
Confidence 33445678777778999999999999999999964
No 81
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=28.62 E-value=3.1e+02 Score=24.25 Aligned_cols=84 Identities=13% Similarity=0.132 Sum_probs=55.4
Q ss_pred HHHHHHHHhcC-----CcEEEEEEcCCch---HHHHHHhhcCCccEEEEecCCCCCCCCHHHHHHHHHHHHhCCcEEEEc
Q psy9406 19 LNTITAATLCS-----DEIHILIIGYNIE---KVILDAKKVNNIKKILLVDSLYFSNNLPENIAAQISVIASNYSHILAP 90 (312)
Q Consensus 19 lEll~~A~~Lg-----~~V~av~~G~~~~---~~a~~~~~~~Gad~V~~~~~~~l~~~~~e~~a~~l~~l~~~~~~IL~~ 90 (312)
..++.+++++. ..+..+++|.+.. +..+++.+.+| +.++... ....+. +.++....|++++|
T Consensus 268 ~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~l~~~~~~~~-~~~~~~g-----~~~~~~----~~~~~~~adv~v~p 337 (439)
T 3fro_A 268 DVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKVITE-----MLSREF----VRELYGSVDFVIIP 337 (439)
T ss_dssp HHHHHHHHHHHTSGGGGGEEEEEECCCCHHHHHHHHHHHHHCT-TEEEECS-----CCCHHH----HHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHHhcccCCCeEEEEEcCCChhHHHHHHHHHhhcC-CEEEEcC-----CCCHHH----HHHHHHHCCEEEeC
Confidence 35566666662 4789999998753 44455555577 6555432 122233 34444567999999
Q ss_pred CCCCcccHHHHHHHHcCCceee
Q psy9406 91 ATIYGKNILPRVAALLNVMQIS 112 (312)
Q Consensus 91 aT~~GrdLaprlAarL~~~lva 112 (312)
+...|--+..-=|...|.|+++
T Consensus 338 s~~e~~~~~~~EAma~G~Pvi~ 359 (439)
T 3fro_A 338 SYFEPFGLVALEAMCLGAIPIA 359 (439)
T ss_dssp BSCCSSCHHHHHHHHTTCEEEE
T ss_pred CCCCCccHHHHHHHHCCCCeEE
Confidence 9888877887778888888875
No 82
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=27.58 E-value=55 Score=23.14 Aligned_cols=36 Identities=19% Similarity=0.381 Sum_probs=29.8
Q ss_pred CceeCCceEEEEeeccchhhhcc-cCCCcEEEEEcCC
Q psy9406 248 GKIVAPQLYIAIGISGAIQHLSG-MKDSKIIVAINQD 283 (312)
Q Consensus 248 G~~v~P~lYia~GISGa~qH~~G-~~~s~~IvAIN~D 283 (312)
|-.+...+||.-=..|..-+.+| ++--|.|++||..
T Consensus 16 G~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~ 52 (88)
T 3e17_A 16 GLRLGSQIFVKEMTRTGLATKDGNLHEGDIILKINGT 52 (88)
T ss_dssp CEEEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTE
T ss_pred CEEEeCCEEEEEECCCCHHHHcCCCCCCCEEEEECCE
Confidence 34444578888778899999999 9999999999974
No 83
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=27.49 E-value=51 Score=23.12 Aligned_cols=32 Identities=25% Similarity=0.404 Sum_probs=26.1
Q ss_pred CCceEEEEeeccchhhhcccCCCcEEEEEcCC
Q psy9406 252 APQLYIAIGISGAIQHLSGMKDSKIIVAINQD 283 (312)
Q Consensus 252 ~P~lYia~GISGa~qH~~G~~~s~~IvAIN~D 283 (312)
.+.++|.-=..|++-+-+|++.-|.|++||.-
T Consensus 27 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~ 58 (90)
T 2eaq_A 27 IPGIFVASVEAGSPAEFSQLQVDDEIIAINNT 58 (90)
T ss_dssp TTEEEEEEECTTSHHHHTTCCTTCEEEEETTE
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCE
Confidence 34567765567889999999999999999974
No 84
>3dff_A Teicoplanin pseudoaglycone deacetylases ORF2; lipoglycopeptide, zinc dependen hydrolase; HET: MSE PG4; 1.60A {Actinoplanes teichomyceticus} PDB: 2x9l_A* 3dfk_A* 3dfm_A 2xad_A*
Probab=26.95 E-value=3.1e+02 Score=23.79 Aligned_cols=25 Identities=20% Similarity=0.215 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHh--CCcEEEEcCCCCc
Q psy9406 71 ENIAAQISVIAS--NYSHILAPATIYG 95 (312)
Q Consensus 71 e~~a~~l~~l~~--~~~~IL~~aT~~G 95 (312)
+...+.|.++++ +|++|+.+....+
T Consensus 134 ~~l~~~l~~~ir~~~PdvV~t~~~~d~ 160 (273)
T 3dff_A 134 GEVADDIRSIIDEFDPTLVVTCAAIGE 160 (273)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCTTC
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCC
Confidence 466666777766 6899999866555
No 85
>2e5f_A Hypothetical protein PH0510; structural genomics, sugar binding protein, NPPSFA, national on protein structural and functional analyses; 1.35A {Pyrococcus horikoshii} PDB: 2dec_A* 2df8_A 2cb0_A*
Probab=26.40 E-value=26 Score=31.63 Aligned_cols=94 Identities=16% Similarity=0.206 Sum_probs=52.9
Q ss_pred CCCCCcEEEEeCccCCCccchHHHHHHHHHhCC--eeeecHhhHhcCCCCCCeEeccCCcee---CCceEEEEeeccchh
Q psy9406 192 ELTSAKIVVAGGRGLGSSKNFKILEGLADKLNA--AIGASRAAVDAGYISNNLQIGQTGKIV---APQLYIAIGISGAIQ 266 (312)
Q Consensus 192 ~l~~A~vvV~~GrG~~~~e~~~~~~~LA~~lga--~vg~SRp~vd~gw~~~~~qIG~sG~~v---~P~lYia~GISGa~q 266 (312)
-+.+++.|+-.|.|-. ......++..|.- .+-+. ..+..+.-.. ..+ +|+|.|++--||-..
T Consensus 27 ~l~~~~~I~i~G~G~S----~~~a~~~~~~l~~~~g~~v~--~~~se~~~~~-------~~~~~~~~dlvI~iS~SG~T~ 93 (325)
T 2e5f_A 27 KISLPNRILYLGCGSS----HFLSKLLAMVTNMHGGLGIA--LPCSEFLYSK-------ETYPIGEVELAVGISRSGETT 93 (325)
T ss_dssp TCCCCSEEEEEESTHH----HHHHHHHHHHHHHTTSEEEE--EEHHHHHHHG-------GGSCCCSCSEEEEECSSSCCH
T ss_pred HHhCCCEEEEEEChHH----HHHHHHHHHHHHHHhCCCEE--EechHHhhcC-------cccCCCCCeEEEEEeCCCCCH
Confidence 3678899999898843 2233333333321 12222 1111111000 113 457999999999765
Q ss_pred hhcc-cCCC-cEEEEEcCCCCCCcccccceEEeec
Q psy9406 267 HLSG-MKDS-KIIVAINQDEDAPIFDISDYGLVGD 299 (312)
Q Consensus 267 H~~G-~~~s-~~IvAIN~D~~ApIf~~aDygiVgD 299 (312)
.+.- ++.+ -.+|+|=++ +.|+-+.||+.+.-.
T Consensus 94 e~l~a~~~aka~viaIT~~-~S~La~~ad~~l~~~ 127 (325)
T 2e5f_A 94 EILLALEKINVKKLGITTR-ESSLTRMCDYSLVVP 127 (325)
T ss_dssp HHHHHHHTCCSCEEEEESS-SCHHHHHSSEEEECC
T ss_pred HHHHHHHHhCCCEEEEECC-CCHHHHhcCEEEecC
Confidence 4322 2222 245667666 999999999988654
No 86
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=25.73 E-value=3.3e+02 Score=24.06 Aligned_cols=86 Identities=12% Similarity=0.066 Sum_probs=52.2
Q ss_pred HHHHHHHHhc---CCcEEEEEEcCCch-------HHHHHHhhcCCccE-------EEEecCCCCCCCCHHHHHHHHHHHH
Q psy9406 19 LNTITAATLC---SDEIHILIIGYNIE-------KVILDAKKVNNIKK-------ILLVDSLYFSNNLPENIAAQISVIA 81 (312)
Q Consensus 19 lEll~~A~~L---g~~V~av~~G~~~~-------~~a~~~~~~~Gad~-------V~~~~~~~l~~~~~e~~a~~l~~l~ 81 (312)
..++.+.+++ ..++..+++|.... +..+++++..|.+. ++.... ....+...+ +.
T Consensus 200 ~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g----~~~~~~~~~----~~ 271 (413)
T 3oy2_A 200 DIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRT----VLTDERVDM----MY 271 (413)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECS----CCCHHHHHH----HH
T ss_pred HHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccC----cCCHHHHHH----HH
Confidence 3455555555 34577778886542 44445444466654 333321 122333333 33
Q ss_pred hCCcEEEEcCCCCcccHHHHHHHHcCCceee
Q psy9406 82 SNYSHILAPATIYGKNILPRVAALLNVMQIS 112 (312)
Q Consensus 82 ~~~~~IL~~aT~~GrdLaprlAarL~~~lva 112 (312)
...|++++|+...|--+..-=|...|.|+++
T Consensus 272 ~~adv~v~pS~~E~~~~~~lEAma~G~PvI~ 302 (413)
T 3oy2_A 272 NACDVIVNCSSGEGFGLCSAEGAVLGKPLII 302 (413)
T ss_dssp HHCSEEEECCSCCSSCHHHHHHHTTTCCEEE
T ss_pred HhCCEEEeCCCcCCCCcHHHHHHHcCCCEEE
Confidence 4568999999888888888888889998885
No 87
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=25.42 E-value=67 Score=22.45 Aligned_cols=29 Identities=10% Similarity=0.331 Sum_probs=25.7
Q ss_pred eEEEEeeccchhhhcc-cCCCcEEEEEcCC
Q psy9406 255 LYIAIGISGAIQHLSG-MKDSKIIVAINQD 283 (312)
Q Consensus 255 lYia~GISGa~qH~~G-~~~s~~IvAIN~D 283 (312)
+||.-=..|++-+-+| ++--|.|++||.-
T Consensus 29 ~~V~~V~~~spA~~aG~L~~GD~I~~ing~ 58 (90)
T 2q9v_A 29 IYIGHIVPLGAADTDGRLRSGDELISVDGT 58 (90)
T ss_dssp EEEEEECTTSHHHHHCCCCTTCEEEEETTE
T ss_pred EEEEEECCCChHHHCCCCCCCCEEEEECCE
Confidence 7777767899999999 9999999999964
No 88
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=25.13 E-value=2.7e+02 Score=24.65 Aligned_cols=39 Identities=13% Similarity=0.064 Sum_probs=27.6
Q ss_pred CCEEEEEEe----CCCccChHHHHHHHHHHhcCCcEEEEEEcC
Q psy9406 1 MPALVIAEH----DNSYLKTSTLNTITAATLCSDEIHILIIGY 39 (312)
Q Consensus 1 m~ilv~~E~----~~g~l~~~slEll~~A~~Lg~~V~av~~G~ 39 (312)
|+|+++... ..|.......+|...-++.|-+|+++....
T Consensus 3 MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~ 45 (439)
T 3fro_A 3 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSH 45 (439)
T ss_dssp CEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECT
T ss_pred eEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 899999844 235566677777766666788888887554
No 89
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=24.70 E-value=73 Score=28.35 Aligned_cols=110 Identities=5% Similarity=-0.073 Sum_probs=0.0
Q ss_pred CCEEEEEEeCC---CccChHHHHHHHHHHhcCCcEEEEEEcCCchHHHHHHhhcCCccEEEEec--CCCCCCCCHHHHHH
Q psy9406 1 MPALVIAEHDN---SYLKTSTLNTITAATLCSDEIHILIIGYNIEKVILDAKKVNNIKKILLVD--SLYFSNNLPENIAA 75 (312)
Q Consensus 1 m~ilv~~E~~~---g~l~~~slEll~~A~~Lg~~V~av~~G~~~~~~a~~~~~~~Gad~V~~~~--~~~l~~~~~e~~a~ 75 (312)
|+|+++..... |......++++..-++.|-+|.++..........+.... .| +++.+. ..............
T Consensus 21 MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~ 97 (406)
T 2gek_A 21 MRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVVS-GG--KAVPIPYNGSVARLRFGPATHR 97 (406)
T ss_dssp CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEEE-CC--CCC------------CCHHHHH
T ss_pred ceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCccccc-CC--cEEeccccCCcccccccHHHHH
Q ss_pred HHHHHHh--CCcEEEEcCCCCcccHHHHHHHHcCCceeeeE
Q psy9406 76 QISVIAS--NYSHILAPATIYGKNILPRVAALLNVMQISEI 114 (312)
Q Consensus 76 ~l~~l~~--~~~~IL~~aT~~GrdLaprlAarL~~~lvadv 114 (312)
.+.++++ +||+|++.......- +..++.+++.+++.++
T Consensus 98 ~l~~~l~~~~~Dii~~~~~~~~~~-~~~~~~~~~~~~i~~~ 137 (406)
T 2gek_A 98 KVKKWIAEGDFDVLHIHEPNAPSL-SMLALQAAEGPIVATF 137 (406)
T ss_dssp HHHHHHHHHCCSEEEEECCCSSSH-HHHHHHHEESSEEEEE
T ss_pred HHHHHHHhcCCCEEEECCccchHH-HHHHHHhcCCCEEEEE
No 90
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=23.20 E-value=77 Score=21.37 Aligned_cols=31 Identities=10% Similarity=0.359 Sum_probs=24.9
Q ss_pred CceEEEEeeccchhhhcc-cCCCcEEEEEcCC
Q psy9406 253 PQLYIAIGISGAIQHLSG-MKDSKIIVAINQD 283 (312)
Q Consensus 253 P~lYia~GISGa~qH~~G-~~~s~~IvAIN~D 283 (312)
..++|.-=..|++-+-+| ++.-|.|++||.-
T Consensus 21 ~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~ 52 (81)
T 2rcz_A 21 SHIFVKEISQDSLAARDGNIQEGDVVLKINGT 52 (81)
T ss_dssp EEEEEEEECTTSHHHHHSSCCTTCEEEEETTE
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCE
Confidence 346665556788888999 9999999999974
No 91
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=23.14 E-value=96 Score=22.97 Aligned_cols=30 Identities=20% Similarity=0.392 Sum_probs=25.8
Q ss_pred ceEEEEeeccchhhhcccCCCcEEEEEcCC
Q psy9406 254 QLYIAIGISGAIQHLSGMKDSKIIVAINQD 283 (312)
Q Consensus 254 ~lYia~GISGa~qH~~G~~~s~~IvAIN~D 283 (312)
-+||.-=..|.+-+.+|++.-|.|++||.-
T Consensus 43 gv~V~~V~~~spA~~aGL~~GD~Il~vng~ 72 (117)
T 1uit_A 43 GIYVSKVTVGSIAHQAGLEYGDQLLEFNGI 72 (117)
T ss_dssp CEEEEEECTTSHHHHHTCCTTCEECEETTE
T ss_pred CEEEEEECCCCHHHHcCCCCCCEEEEECCE
Confidence 477776678899999999999999999964
No 92
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=23.05 E-value=1.4e+02 Score=27.34 Aligned_cols=106 Identities=8% Similarity=-0.014 Sum_probs=48.6
Q ss_pred CEEEEEEeCCCccChHHHHHHHHHHhcC-CcEEEEEEcCCchHHHHHHhhcCCccEEEEecCCCCCCCCHHHHHHHHHHH
Q psy9406 2 PALVIAEHDNSYLKTSTLNTITAATLCS-DEIHILIIGYNIEKVILDAKKVNNIKKILLVDSLYFSNNLPENIAAQISVI 80 (312)
Q Consensus 2 ~ilv~~E~~~g~l~~~slEll~~A~~Lg-~~V~av~~G~~~~~~a~~~~~~~Gad~V~~~~~~~l~~~~~e~~a~~l~~l 80 (312)
+|++++-++.+.+. -.-++.+-++-. -++.+++-|..-+ ..++....+|.+.-|.++-..............+.++
T Consensus 27 ki~~v~Gtr~~~~~--~a~li~~l~~~~~~~~~~~~tG~h~~-~~~~~~~~~~i~~~~~l~~~~~~~~~~~~~~~~~~~l 103 (396)
T 3dzc_A 27 KVLIVFGTRPEAIK--MAPLVQQLCQDNRFVAKVCVTGQHRE-MLDQVLELFSITPDFDLNIMEPGQTLNGVTSKILLGM 103 (396)
T ss_dssp EEEEEECSHHHHHH--HHHHHHHHHHCTTEEEEEEECCSSSH-HHHHHHHHTTCCCSEECCCCCTTCCHHHHHHHHHHHH
T ss_pred eEEEEEeccHhHHH--HHHHHHHHHhCCCCcEEEEEecccHH-HHHHHHHhcCCCCceeeecCCCCCCHHHHHHHHHHHH
Confidence 68887766543221 122333333332 2344455555432 2333333466532233321111222334445555554
Q ss_pred Hh-----CCcEEEEcCCCCcccHH-HHHHHHcCCcee
Q psy9406 81 AS-----NYSHILAPATIYGKNIL-PRVAALLNVMQI 111 (312)
Q Consensus 81 ~~-----~~~~IL~~aT~~GrdLa-prlAarL~~~lv 111 (312)
.+ +||+|++-..... -++ ...|.++++|++
T Consensus 104 ~~~l~~~kPDvVi~~g~~~~-~~~~~~aa~~~~IPv~ 139 (396)
T 3dzc_A 104 QQVLSSEQPDVVLVHGDTAT-TFAASLAAYYQQIPVG 139 (396)
T ss_dssp HHHHHHHCCSEEEEETTSHH-HHHHHHHHHTTTCCEE
T ss_pred HHHHHhcCCCEEEEECCchh-HHHHHHHHHHhCCCEE
Confidence 32 7998876432222 233 455667888865
No 93
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=23.03 E-value=3.5e+02 Score=24.48 Aligned_cols=80 Identities=18% Similarity=0.169 Sum_probs=51.4
Q ss_pred EEEEEcCCc--hHHHHHHhhcCCccEEEEecCCCCC----------------CCCHHHHHHHHHHHH-------------
Q psy9406 33 HILIIGYNI--EKVILDAKKVNNIKKILLVDSLYFS----------------NNLPENIAAQISVIA------------- 81 (312)
Q Consensus 33 ~av~~G~~~--~~~a~~~~~~~Gad~V~~~~~~~l~----------------~~~~e~~a~~l~~l~------------- 81 (312)
.++++|.+. ..+++.++. .|+.++.++|++..+ .+-++..++.+.++.
T Consensus 120 ~VlvvG~GglGs~va~~La~-aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~i~ 198 (353)
T 3h5n_A 120 KVVILGCGGIGNHVSVILAT-SGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIALNIN 198 (353)
T ss_dssp EEEEECCSHHHHHHHHHHHH-HTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEECCCC
T ss_pred eEEEECCCHHHHHHHHHHHh-CCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEeecccC
Confidence 566777653 556777776 799999999875432 123455666666542
Q ss_pred --------hCCcEEEEcC-CCC-cccHHHHHHHHcCCceeee
Q psy9406 82 --------SNYSHILAPA-TIY-GKNILPRVAALLNVMQISE 113 (312)
Q Consensus 82 --------~~~~~IL~~a-T~~-GrdLaprlAarL~~~lvad 113 (312)
+++|+|+... +.. -|.+..+.+.+++.|++.-
T Consensus 199 ~~~~~~~~~~~DlVvd~~Dn~~~~r~~ln~~c~~~~~p~i~~ 240 (353)
T 3h5n_A 199 DYTDLHKVPEADIWVVSADHPFNLINWVNKYCVRANQPYINA 240 (353)
T ss_dssp SGGGGGGSCCCSEEEECCCCSTTHHHHHHHHHHHTTCCEEEE
T ss_pred chhhhhHhccCCEEEEecCChHHHHHHHHHHHHHhCCCEEEE
Confidence 2346666543 333 5677778888888888854
No 94
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=23.02 E-value=85 Score=21.93 Aligned_cols=31 Identities=19% Similarity=0.304 Sum_probs=26.8
Q ss_pred CceEEEEeeccchhhhcccCCCcEEEEEcCC
Q psy9406 253 PQLYIAIGISGAIQHLSGMKDSKIIVAINQD 283 (312)
Q Consensus 253 P~lYia~GISGa~qH~~G~~~s~~IvAIN~D 283 (312)
+.+||.-=..|++-+.+|++--|.|++||.-
T Consensus 27 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~ 57 (91)
T 1g9o_A 27 LGQYIRLVEPGSPAEKAGLLAGDRLVEVNGE 57 (91)
T ss_dssp SSEEEEEECTTSHHHHTTCCTTCEEEEETTE
T ss_pred CCEEEEEECCCCHHHHCCCCCCCEEEEECCE
Confidence 4577776678999999999999999999974
No 95
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=22.15 E-value=83 Score=21.95 Aligned_cols=31 Identities=10% Similarity=0.359 Sum_probs=25.2
Q ss_pred CceEEEEeeccchhhhcc-cCCCcEEEEEcCC
Q psy9406 253 PQLYIAIGISGAIQHLSG-MKDSKIIVAINQD 283 (312)
Q Consensus 253 P~lYia~GISGa~qH~~G-~~~s~~IvAIN~D 283 (312)
..++|.-=..|+.-+.+| ++.-|.|++||.-
T Consensus 23 ~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~ 54 (92)
T 3cyy_A 23 SHIFVKEISQDSLAARDGNIQEGDVVLKINGT 54 (92)
T ss_dssp EEEEEEEECTTCHHHHSCCCCTTCEEEEETTE
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCE
Confidence 456665556788889999 9999999999973
No 96
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.01 E-value=49 Score=23.60 Aligned_cols=31 Identities=26% Similarity=0.304 Sum_probs=25.4
Q ss_pred CceEEEEeeccchhhhcccCCCcEEEEEcCC
Q psy9406 253 PQLYIAIGISGAIQHLSGMKDSKIIVAINQD 283 (312)
Q Consensus 253 P~lYia~GISGa~qH~~G~~~s~~IvAIN~D 283 (312)
..++|.-=..|++-+.+|++.-|.|++||.-
T Consensus 32 ~~v~V~~V~~~spA~~aGl~~GD~I~~ing~ 62 (94)
T 2eeg_A 32 APLTISRVHAGSKAALAALCPGDLIQAINGE 62 (94)
T ss_dssp SCCEECCCCSSSHHHHTTCCTTCEEEEETTE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCE
Confidence 3466665567889999999999999999964
No 97
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=21.76 E-value=89 Score=21.51 Aligned_cols=30 Identities=27% Similarity=0.357 Sum_probs=26.2
Q ss_pred ceEEEEeeccchhhhcc-cCCCcEEEEEcCC
Q psy9406 254 QLYIAIGISGAIQHLSG-MKDSKIIVAINQD 283 (312)
Q Consensus 254 ~lYia~GISGa~qH~~G-~~~s~~IvAIN~D 283 (312)
-+||.-=..|++-+.+| ++.-|.|++||.-
T Consensus 26 ~~~V~~v~~~spA~~aG~l~~GD~I~~vng~ 56 (85)
T 2i04_A 26 FLQIKSLVLDGPAALDGKMETGDVIVSVNDT 56 (85)
T ss_dssp CEEEEEECTTSHHHHHCCCCTTCEEEEETTE
T ss_pred CEEEEEECCCChHHHcCCCCCCCEEEEECCE
Confidence 47777777899999999 9999999999974
No 98
>3g68_A Putative phosphosugar isomerase; SIS domain, double-SIS DOMA protein, structural genomics, joint center for structural G JCSG; HET: MSE CIT; 1.80A {Clostridium difficile}
Probab=20.99 E-value=1.1e+02 Score=27.81 Aligned_cols=99 Identities=17% Similarity=0.097 Sum_probs=57.9
Q ss_pred CCCCCCcEEEEeCccCCCccchHHHHHHHHHh-CCeeeecHhhHhcCCCCCCeEeccCCceeCCceEEEEeeccchhhhc
Q psy9406 191 PELTSAKIVVAGGRGLGSSKNFKILEGLADKL-NAAIGASRAAVDAGYISNNLQIGQTGKIVAPQLYIAIGISGAIQHLS 269 (312)
Q Consensus 191 ~~l~~A~vvV~~GrG~~~~e~~~~~~~LA~~l-ga~vg~SRp~vd~gw~~~~~qIG~sG~~v~P~lYia~GISGa~qH~~ 269 (312)
....+++.|+-.|.|-..-- -..+..+-+.+ |-.+-+- .+..+. .......-+.+|.|++--||-...+.
T Consensus 29 ~~~~~~~~I~i~G~G~S~~~-a~~~~~~l~~~~g~~~~~~---~~se~~-----~~~~~~~~~~dlvI~iS~SG~T~e~l 99 (352)
T 3g68_A 29 VKRTNLKKIIITGSGTSYHS-GVQVQPYLQNLLDIDVVKM---YPFMIT-----EDTFKFDNENTLVVGVSQGGSSYSTY 99 (352)
T ss_dssp GGGSCCSEEEEECSHHHHHH-HHHHHHHHHHHCSSEEEEE---CGGGCC-----GGGGSSCCTTEEEEEEESSSCCHHHH
T ss_pred hhhcCCCEEEEEEeehHHHH-HHHHHHHHHHHhCCcEEEE---cchhhh-----hcccCCCCCCcEEEEEeCCCCCHHHH
Confidence 34578999999999943111 11233333333 3222111 111121 11111112578999999999766443
Q ss_pred cc------CCCcEEEEEcCCCCCCcccccceEEeec
Q psy9406 270 GM------KDSKIIVAINQDEDAPIFDISDYGLVGD 299 (312)
Q Consensus 270 G~------~~s~~IvAIN~D~~ApIf~~aDygiVgD 299 (312)
-. ++++ +|+|=++++.|+-+.||+.+.-.
T Consensus 100 ~a~~~ak~~ga~-~iaIT~~~~S~La~~aD~~l~~~ 134 (352)
T 3g68_A 100 NAMKLAEDKGCK-IASMAGCKNALIDEISDYILTVN 134 (352)
T ss_dssp HHHHHHHHTTCE-EEEEESSTTCGGGGGCSEECCCC
T ss_pred HHHHHHHHCCCC-EEEEeCCCCChHHHhCCEEEEeC
Confidence 32 3454 67888899999999999988644
No 99
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=20.79 E-value=2.2e+02 Score=26.06 Aligned_cols=83 Identities=8% Similarity=-0.033 Sum_probs=49.6
Q ss_pred HHHHHHHhcC-CcEEEEEEcCCc---hHHHHHHhhcCCccEEEEecCCCCCCCCHHHHHHHHHHHHhCCcEEEEcCCCCc
Q psy9406 20 NTITAATLCS-DEIHILIIGYNI---EKVILDAKKVNNIKKILLVDSLYFSNNLPENIAAQISVIASNYSHILAPATIYG 95 (312)
Q Consensus 20 Ell~~A~~Lg-~~V~av~~G~~~---~~~a~~~~~~~Gad~V~~~~~~~l~~~~~e~~a~~l~~l~~~~~~IL~~aT~~G 95 (312)
.|+.+.+++. ..+..+++|.+. .+..+++...++ ++|.... .+..+.+.+. ....|++++|+...|
T Consensus 309 ~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~-~~v~~~~-----g~~~~~~~~~----~~~adv~v~pS~~E~ 378 (485)
T 2qzs_A 309 LVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYP-GQVGVQI-----GYHEAFSHRI----MGGADVILVPSRFEP 378 (485)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEECHHHHHHHHHHHHHST-TTEEEEE-----SCCHHHHHHH----HHHCSEEEECCSCCS
T ss_pred HHHHHHHHHhhCCcEEEEEeCCchHHHHHHHHHHHhCC-CcEEEeC-----CCCHHHHHHH----HHhCCEEEECCccCC
Confidence 4555555552 367788888763 233444444456 6675322 2233333333 335689999988777
Q ss_pred ccHHHHHHHHcCCceee
Q psy9406 96 KNILPRVAALLNVMQIS 112 (312)
Q Consensus 96 rdLaprlAarL~~~lva 112 (312)
--+..-=|...|.|+++
T Consensus 379 ~g~~~lEAma~G~PvI~ 395 (485)
T 2qzs_A 379 CGLTQLYGLKYGTLPLV 395 (485)
T ss_dssp SCSHHHHHHHHTCEEEE
T ss_pred CcHHHHHHHHCCCCEEE
Confidence 77777778888888874
No 100
>3dfi_A Pseudoaglycone deacetylase DBV21; single alpha-beta domain, hydrolase; 2.10A {Actinoplanes teichomyceticus}
Probab=20.67 E-value=2e+02 Score=25.06 Aligned_cols=25 Identities=16% Similarity=0.174 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHh--CCcEEEEcCCCCc
Q psy9406 71 ENIAAQISVIAS--NYSHILAPATIYG 95 (312)
Q Consensus 71 e~~a~~l~~l~~--~~~~IL~~aT~~G 95 (312)
+...+.|.++++ +|++|+.+....+
T Consensus 131 ~~~~~~l~~~ir~~~PdvV~t~~~~d~ 157 (270)
T 3dfi_A 131 AAIREDIESMIAECDPTLVLTCVAIGK 157 (270)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCTTC
T ss_pred HHHHHHHHHHHHHcCCCEEEeCCCCCC
Confidence 455666666665 6899999866555
No 101
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=20.50 E-value=94 Score=22.69 Aligned_cols=30 Identities=13% Similarity=0.340 Sum_probs=26.3
Q ss_pred ceEEEEeeccchhhhcccCCCcEEEEEcCC
Q psy9406 254 QLYIAIGISGAIQHLSGMKDSKIIVAINQD 283 (312)
Q Consensus 254 ~lYia~GISGa~qH~~G~~~s~~IvAIN~D 283 (312)
-+||.-=..|+.-+.+|++.-|.|++||.-
T Consensus 46 gv~V~~V~~~spA~~aGl~~GD~I~~vng~ 75 (109)
T 1q3o_A 46 LQYLESVDEGGVAWRAGLRMGDFLIEVNGQ 75 (109)
T ss_dssp SEEEEEECTTSHHHHTTCCTTCEEEEETTE
T ss_pred CEEEEEECCCCHHHHcCCCCCCEEEEECCE
Confidence 577776678999999999999999999974
No 102
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=20.40 E-value=5.3e+02 Score=24.05 Aligned_cols=83 Identities=2% Similarity=0.002 Sum_probs=51.6
Q ss_pred HHHHHHHhc---CCcEEEEEEc-CCc-hHHHHHHhhcCCc--cEEEEecCCCCCCCCHHHHHHHHHHHHhCCcEEEEcCC
Q psy9406 20 NTITAATLC---SDEIHILIIG-YNI-EKVILDAKKVNNI--KKILLVDSLYFSNNLPENIAAQISVIASNYSHILAPAT 92 (312)
Q Consensus 20 Ell~~A~~L---g~~V~av~~G-~~~-~~~a~~~~~~~Ga--d~V~~~~~~~l~~~~~e~~a~~l~~l~~~~~~IL~~aT 92 (312)
.++....++ ...+..+++| ++. .+..++.....|. ++|..... ...+. +.++....|++++|+.
T Consensus 392 ~li~a~~~l~~~~~~~~l~i~G~~g~~~~~l~~~~~~~~l~~~~v~~~g~-----~~~~~----~~~~~~~adv~v~ps~ 462 (568)
T 2vsy_A 392 QSMARMLAVLREVPDSVLWLLSGPGEADARLRAFAHAQGVDAQRLVFMPK-----LPHPQ----YLARYRHADLFLDTHP 462 (568)
T ss_dssp HHHHHHHHHHHHCTTCEEEEECCSTTHHHHHHHHHHHTTCCGGGEEEECC-----CCHHH----HHHHGGGCSEEECCSS
T ss_pred HHHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHcCCChhHEEeeCC-----CCHHH----HHHHHhcCCEEeeCCC
Confidence 444444444 3457888888 543 3334444444676 57776532 11122 3344456799999987
Q ss_pred CCcccHHHHHHHHcCCceee
Q psy9406 93 IYGKNILPRVAALLNVMQIS 112 (312)
Q Consensus 93 ~~GrdLaprlAarL~~~lva 112 (312)
. |--+..-=|...|.|+++
T Consensus 463 ~-~~g~~~lEAma~G~Pvv~ 481 (568)
T 2vsy_A 463 Y-NAHTTASDALWTGCPVLT 481 (568)
T ss_dssp S-CCSHHHHHHHHTTCCEEB
T ss_pred C-CCcHHHHHHHhCCCCEEe
Confidence 7 877777788889999886
No 103
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=20.33 E-value=3.1e+02 Score=24.27 Aligned_cols=33 Identities=21% Similarity=0.167 Sum_probs=24.6
Q ss_pred cEEEEEEcCCc--hHHHHHHhhcCCccEEEEecCCC
Q psy9406 31 EIHILIIGYNI--EKVILDAKKVNNIKKILLVDSLY 64 (312)
Q Consensus 31 ~V~av~~G~~~--~~~a~~~~~~~Gad~V~~~~~~~ 64 (312)
.-.++++|-+. ..+++.++. .|+.++.++|++.
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~-aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTR-CGIGKLLLFDYDK 70 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHH-HTCSEEEEECCCB
T ss_pred CCeEEEECcCHHHHHHHHHHHH-cCCCEEEEECCCc
Confidence 34677788764 556777776 7999999998765
No 104
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=20.23 E-value=81 Score=22.18 Aligned_cols=29 Identities=14% Similarity=0.267 Sum_probs=25.6
Q ss_pred eEEEEeeccchhhhcccCCCcEEEEEcCC
Q psy9406 255 LYIAIGISGAIQHLSGMKDSKIIVAINQD 283 (312)
Q Consensus 255 lYia~GISGa~qH~~G~~~s~~IvAIN~D 283 (312)
+||.-=..|+.-+.+|++.-|.|++||.-
T Consensus 26 ~~V~~V~~~spA~~aGl~~GD~I~~vng~ 54 (91)
T 2f5y_A 26 VRVQAVDSGGPAERAGLQQLDTVLQLNER 54 (91)
T ss_dssp CEEEEECTTSHHHHHTCCTTCEEEEETTE
T ss_pred EEEEEECCCCHHHHcCCCCCCEEEEECCE
Confidence 67776678999999999999999999974
No 105
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=20.11 E-value=89 Score=22.12 Aligned_cols=30 Identities=17% Similarity=0.204 Sum_probs=25.9
Q ss_pred ceEEEEeeccchhhhcccCCCcEEEEEcCC
Q psy9406 254 QLYIAIGISGAIQHLSGMKDSKIIVAINQD 283 (312)
Q Consensus 254 ~lYia~GISGa~qH~~G~~~s~~IvAIN~D 283 (312)
-+||.-=..|++-+-+|++--|.|++||.-
T Consensus 31 g~~V~~V~~~spA~~aGl~~GD~I~~ing~ 60 (96)
T 2v90_A 31 GQFLWEVDPGLPAKKAGMQAGDRLVAVAGE 60 (96)
T ss_dssp EEEEEEECTTSHHHHTTCCTTEEEEEETTE
T ss_pred CeEEEEECCCChHHHcCCCCCCEEEEECCE
Confidence 467766678999999999999999999974
No 106
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=20.09 E-value=74 Score=22.11 Aligned_cols=30 Identities=13% Similarity=0.169 Sum_probs=25.6
Q ss_pred ceEEEEeeccchhhhcccCCCcEEEEEcCC
Q psy9406 254 QLYIAIGISGAIQHLSGMKDSKIIVAINQD 283 (312)
Q Consensus 254 ~lYia~GISGa~qH~~G~~~s~~IvAIN~D 283 (312)
.+||.-=..|++-+.+|++.-|.|++||.-
T Consensus 28 ~~~V~~V~~~spA~~aGl~~GD~I~~ing~ 57 (88)
T 2uzc_A 28 PLTISSLKDGGKAAQANVRIGDVVLSIDGI 57 (88)
T ss_dssp EEEEEEECTTSHHHHTTCCTTCEEEEETTE
T ss_pred CeEEEEECCCChHHHcCCCCCCEEEEECCE
Confidence 467766668899999999999999999974
No 107
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=20.05 E-value=4.8e+02 Score=23.40 Aligned_cols=89 Identities=9% Similarity=0.020 Sum_probs=60.3
Q ss_pred hHHHHHHHHHHhcCCcEEEEEE--cCC--chHHHHHHhh-cCCccEEEEecCCCCCCCCHHHHHHHHHHHHhCC--cEEE
Q psy9406 16 TSTLNTITAATLCSDEIHILII--GYN--IEKVILDAKK-VNNIKKILLVDSLYFSNNLPENIAAQISVIASNY--SHIL 88 (312)
Q Consensus 16 ~~slEll~~A~~Lg~~V~av~~--G~~--~~~~a~~~~~-~~Gad~V~~~~~~~l~~~~~e~~a~~l~~l~~~~--~~IL 88 (312)
+...+.+..|++.|.+|...+. .+. .+...+.+.+ ..|++.+.+.|.-.+ ..|+.+.+.+..+.+.. .+=+
T Consensus 114 e~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~~l~~~~~~~~G~~~i~l~Dt~G~--~~P~~~~~lv~~l~~~~~~~i~~ 191 (320)
T 3dxi_A 114 DRAIVLAKAIKTMGFEVGFNVMYMSKWAEMNGFLSKLKAIDKIADLFCMVDSFGG--ITPKEVKNLLKEVRKYTHVPVGF 191 (320)
T ss_dssp HHHHHHHHHHHTTTCEEEEEECCTTTGGGSTTSGGGGGGGTTTCSEEEEECTTSC--CCHHHHHHHHHHHHHHCCSCEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEEEeCCCCCCHHHHHHHHHHhhCCCCEEEECcccCC--CCHHHHHHHHHHHHHhCCCeEEE
Confidence 5677888889999877665442 221 1112222221 269999999987544 46888888888876643 4566
Q ss_pred EcCCCCcccHHHHHHHHc
Q psy9406 89 APATIYGKNILPRVAALL 106 (312)
Q Consensus 89 ~~aT~~GrdLaprlAarL 106 (312)
=.+.+.|..++--+++-.
T Consensus 192 H~Hn~~G~a~an~laA~~ 209 (320)
T 3dxi_A 192 HGHDNLQLGLINSITAID 209 (320)
T ss_dssp ECBCTTSCHHHHHHHHHH
T ss_pred EeCCCCccHHHHHHHHHH
Confidence 688999999999988754
Done!