BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9408
(219 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9HZP6|ETFB_PSEAE Electron transfer flavoprotein subunit beta OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=etfB PE=3 SV=1
Length = 249
Score = 238 bits (607), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 120/219 (54%), Positives = 165/219 (75%), Gaps = 2/219 (0%)
Query: 1 MSINPFDEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTI 60
MS+NPF EIA+E A+RL+E EI+A+S G +E L+ A+A+G DRAIL+E++
Sbjct: 33 MSMNPFCEIAVEEAVRLKEKGVAT-EIVAVSVGPTAAQEQLRTALALGADRAILVESNDE 91
Query: 61 LQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASKIVLKKN 120
L SL+VAKLL+ +V KE PQLVILGKQ+IDSDNNQTGQMLAAL + Q TFASK+ +
Sbjct: 92 LNSLAVAKLLKAVVDKEQPQLVILGKQAIDSDNNQTGQMLAALTGYAQGTFASKVEV-AG 150
Query: 121 NKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFKIDELNVN 180
+K+ VT+EI+ G +T+ L+LPAI+TTDLR+NEPRY +L NI+KA+KK +++ D L V+
Sbjct: 151 DKVNVTREIDGGLQTVALNLPAIVTTDLRLNEPRYASLPNIMKAKKKPLDVVTPDALGVS 210
Query: 181 INTGLNIIKVKESHKNNLGIKVKNVIELIDKLKNEAKII 219
+ + +KV+ + GIKVK+V EL++KLKNEAK+I
Sbjct: 211 TASTVKTLKVEAPAARSAGIKVKSVAELVEKLKNEAKVI 249
>sp|Q9LSW8|ETFB_ARATH Electron transfer flavoprotein subunit beta, mitochondrial
OS=Arabidopsis thaliana GN=ETFB PE=1 SV=1
Length = 251
Score = 226 bits (575), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 112/220 (50%), Positives = 159/220 (72%), Gaps = 2/220 (0%)
Query: 1 MSINPFDEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTI 60
MS+NPF EIA+E A+R++E+ KE+IA+S G +C + L+ +AMG DR I +ET++I
Sbjct: 33 MSMNPFCEIALEEALRIKEAGFA-KEVIAVSIGPSQCVDTLRTGLAMGADRGIHVETNSI 91
Query: 61 LQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASKIVLKKN 120
L++AK+L+ + ENP L+ LGKQ+ID D NQTGQM+AALL WPQATFASK+VL K+
Sbjct: 92 FLPLTIAKILKSLADVENPGLIFLGKQAIDDDCNQTGQMVAALLGWPQATFASKVVLDKD 151
Query: 121 -NKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFKIDELNV 179
N V +E++ G ET+ + LPA+ITTDLR+N+PRY +L NI+KA+ K I + +L V
Sbjct: 152 KNVATVDREVDGGLETLNVDLPAVITTDLRLNQPRYASLPNIMKAKSKPIKKMTVQDLKV 211
Query: 180 NINTGLNIIKVKESHKNNLGIKVKNVIELIDKLKNEAKII 219
+I + + I++V E K G+ V +V ELIDKLKNEA ++
Sbjct: 212 DIKSDIEILEVTEPPKRKSGVMVSSVDELIDKLKNEAHVV 251
>sp|Q54YZ4|ETFB_DICDI Electron transfer flavoprotein subunit beta OS=Dictyostelium
discoideum GN=etfb PE=3 SV=1
Length = 250
Score = 224 bits (571), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 116/216 (53%), Positives = 157/216 (72%), Gaps = 2/216 (0%)
Query: 1 MSINPFDEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTI 60
MS+NPFDEIA+E AIR++E N KEIIA+S G K +E ++ A+AMG D+ I +ET
Sbjct: 35 MSMNPFDEIAVEEAIRIKEK-NLAKEIIAVSMGPKTSQETIRTAIAMGADKGIHVETTAE 93
Query: 61 LQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASKIVLKKN 120
LQ LSVAKLL+ +V KE P L+ILGKQ+ID D NQT QMLA LLNWPQATFASK+ + K+
Sbjct: 94 LQPLSVAKLLKELVDKEKPNLIILGKQAIDDDCNQTAQMLAGLLNWPQATFASKVDI-KD 152
Query: 121 NKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFKIDELNVN 180
+ + VT+EI+ G ET+ + LPAII+ DLR+NEPRY L NI+K++K + + + LNV+
Sbjct: 153 DSVHVTREIDGGLETLSMKLPAIISCDLRLNEPRYAKLQNIMKSKKAELKVETPESLNVD 212
Query: 181 INTGLNIIKVKESHKNNLGIKVKNVIELIDKLKNEA 216
N L II V+E K + G+KV++V +++ LK A
Sbjct: 213 TNCNLKIISVEEPPKRSGGVKVESVENVVEALKKHA 248
>sp|P53575|ETFB_BRAJA Electron transfer flavoprotein subunit beta OS=Bradyrhizobium
japonicum (strain USDA 110) GN=etfB PE=3 SV=2
Length = 249
Score = 222 bits (565), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 105/219 (47%), Positives = 156/219 (71%), Gaps = 2/219 (0%)
Query: 1 MSINPFDEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTI 60
MS+NPFDEIA+E A+RL+E K E++ +S G + E ++ +AMG DR IL++ +
Sbjct: 33 MSMNPFDEIAVEEALRLKEG-GKATEVVVVSIGPAQASETIRTGLAMGADRGILVKAEGT 91
Query: 61 LQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASKIVLKKN 120
++ L+VAK+L+ + ++E P L+ILGKQ+ID D+NQTGQMLAALL W QATFASK+ ++ +
Sbjct: 92 VEPLAVAKILKKVAEEEQPGLIILGKQAIDDDSNQTGQMLAALLGWSQATFASKLEVEGS 151
Query: 121 NKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFKIDELNVN 180
+ VT+E++ G +T+ L PAI+TTDLR+NEPRY +L NI+KA+KK I + + V+
Sbjct: 152 D-FKVTREVDGGLQTVKLKGPAIVTTDLRLNEPRYASLPNIMKAKKKPIAEKTVADYGVD 210
Query: 181 INTGLNIIKVKESHKNNLGIKVKNVIELIDKLKNEAKII 219
+ L ++K E G+KVK+V EL+ KLKNEA ++
Sbjct: 211 VTARLEVLKTTEPAGRKAGVKVKDVAELVSKLKNEAGVL 249
>sp|Q7F9U3|ETFB_ORYSJ Electron transfer flavoprotein subunit beta, mitochondrial OS=Oryza
sativa subsp. japonica GN=ETFB PE=3 SV=1
Length = 253
Score = 221 bits (563), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 112/223 (50%), Positives = 157/223 (70%), Gaps = 6/223 (2%)
Query: 1 MSINPFDEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDT- 59
MS+NPF EIA+E A+RLRES E++A + G + + L+ A+AMG DRA+ + D
Sbjct: 33 MSMNPFCEIAVEEALRLRES-GAATEVVAATVGPSQSADTLRTALAMGADRAVHVLHDPD 91
Query: 60 ---ILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASKIV 116
L L+VAK+L+ + +ENP LVILGKQ+ID D NQTGQMLA LLNWPQ TFASK++
Sbjct: 92 PSRPLLPLAVAKILRALALQENPGLVILGKQAIDDDCNQTGQMLAGLLNWPQGTFASKVI 151
Query: 117 LKKNNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFKIDE 176
L K K V +E++ G ETI L LPA+ITTDLR+N+PRY TL NI+KA+ K I ++
Sbjct: 152 LNKE-KATVEREVDGGIETISLDLPAVITTDLRLNQPRYATLPNIMKAKSKVIKKVTPED 210
Query: 177 LNVNINTGLNIIKVKESHKNNLGIKVKNVIELIDKLKNEAKII 219
L+V+I + + +++V E K G+ + +V EL+D+LKNEA+++
Sbjct: 211 LDVDIRSDMEVVEVTEPPKRKAGVILSSVDELVDRLKNEARVL 253
>sp|A2XQV4|ETFB_ORYSI Electron transfer flavoprotein subunit beta, mitochondrial OS=Oryza
sativa subsp. indica GN=ETFB PE=3 SV=1
Length = 253
Score = 220 bits (561), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 112/223 (50%), Positives = 157/223 (70%), Gaps = 6/223 (2%)
Query: 1 MSINPFDEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDT- 59
MS+NPF EIA+E A+RLRE+ E++A + G + + L+ A+AMG DRA+ + D
Sbjct: 33 MSMNPFCEIAVEEALRLREA-GAATEVVAATVGPSQSADTLRTALAMGADRAVHVLHDPD 91
Query: 60 ---ILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASKIV 116
L L+VAK+L+ + +ENP LVILGKQ+ID D NQTGQMLA LLNWPQ TFASK++
Sbjct: 92 PSRPLLPLAVAKILRALALQENPGLVILGKQAIDDDCNQTGQMLAGLLNWPQGTFASKVI 151
Query: 117 LKKNNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFKIDE 176
L K K V +E++ G ETI L LPA+ITTDLR+N+PRY TL NI+KA+ K I ++
Sbjct: 152 LNKE-KATVEREVDGGIETISLDLPAVITTDLRLNQPRYATLPNIMKAKSKVIKKVTPED 210
Query: 177 LNVNINTGLNIIKVKESHKNNLGIKVKNVIELIDKLKNEAKII 219
L+V+I + + +++V E K G+ + +V ELID+LKNEA+++
Sbjct: 211 LDVDIRSDMEVVEVTEPPKRKAGVILSSVDELIDRLKNEARVL 253
>sp|Q2TBV3|ETFB_BOVIN Electron transfer flavoprotein subunit beta OS=Bos taurus GN=ETFB
PE=2 SV=3
Length = 255
Score = 212 bits (540), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 106/221 (47%), Positives = 152/221 (68%), Gaps = 6/221 (2%)
Query: 2 SINPFDEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTI- 60
S+NPF EIA+E A+RL+E +KEIIA+SCG +C+E ++ A+AMG DR I +E
Sbjct: 37 SMNPFCEIAVEEAVRLKEK-KLVKEIIAVSCGPAQCQETIRTALAMGADRGIHVEVPAAE 95
Query: 61 ---LQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASKIVL 117
L L VA++L + +KE LV+LGKQ+ID D NQTGQM A L+WPQ TFAS++ L
Sbjct: 96 ANHLGPLQVARVLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQVTL 155
Query: 118 KKNNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFKIDEL 177
+ +KI V +EI+ G ET+ L LPA++T DLR+NEPRY TL NI+KA+KK I + K +L
Sbjct: 156 E-GDKIKVEREIDGGLETLRLKLPAVVTADLRLNEPRYATLPNIMKAKKKKIEVIKAGDL 214
Query: 178 NVNINTGLNIIKVKESHKNNLGIKVKNVIELIDKLKNEAKI 218
V++ + L++I V++ + G+KV+ +L+ KLK +I
Sbjct: 215 GVDLTSKLSVISVEDPPQRTAGVKVETTEDLVAKLKEIGRI 255
>sp|Q9DCW4|ETFB_MOUSE Electron transfer flavoprotein subunit beta OS=Mus musculus GN=Etfb
PE=1 SV=3
Length = 255
Score = 212 bits (540), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 105/221 (47%), Positives = 153/221 (69%), Gaps = 6/221 (2%)
Query: 2 SINPFDEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTI- 60
S+NPF EIA+E A+RL+E +KEIIA+SCG +C+E ++ A+AMG DR I +E
Sbjct: 37 SMNPFCEIAVEEAVRLKEK-KLVKEIIAVSCGPSQCQETIRTALAMGADRGIHVEIPGAQ 95
Query: 61 ---LQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASKIVL 117
L L VA++L + +KE L+ LGKQ+ID D NQTGQM A LL+WPQ TFAS++ L
Sbjct: 96 AESLGPLQVARVLAKLAEKEKVDLLFLGKQAIDDDCNQTGQMTAGLLDWPQGTFASQVTL 155
Query: 118 KKNNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFKIDEL 177
+ +K+ V +EI+ G ET+ L LPA++T DLR+NEPRY TL NI+KA+KK I + K +L
Sbjct: 156 E-GDKVKVEREIDGGLETLRLKLPAVVTADLRLNEPRYATLPNIMKAKKKKIEVVKAGDL 214
Query: 178 NVNINTGLNIIKVKESHKNNLGIKVKNVIELIDKLKNEAKI 218
V++ + +++I V+E + + G+KV+ +L+ KLK +I
Sbjct: 215 GVDLTSKVSVISVEEPPQRSAGVKVETTEDLVAKLKEVGRI 255
>sp|Q5RFK0|ETFB_PONAB Electron transfer flavoprotein subunit beta OS=Pongo abelii GN=ETFB
PE=2 SV=3
Length = 255
Score = 211 bits (537), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 104/221 (47%), Positives = 152/221 (68%), Gaps = 6/221 (2%)
Query: 2 SINPFDEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTI- 60
S+NPF EIA+E A+RL+E +KE+IA+SCG +C+E ++ A+AMG DR I +E
Sbjct: 37 SMNPFCEIAVEEAVRLKEK-KLVKEVIAVSCGPAQCQETIRTALAMGADRGIHVEVPPAE 95
Query: 61 ---LQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASKIVL 117
L L VA++L + +KE LV+LGKQ+ID D NQTGQM A L+WPQ TFAS++ L
Sbjct: 96 AERLGPLQVARVLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQVTL 155
Query: 118 KKNNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFKIDEL 177
+ +K+ V +EI+ G ET+ L LPA++T DLR+NEPRY TL NI+KA+KK I + K +L
Sbjct: 156 E-GDKLKVEREIDGGLETLRLKLPAVVTADLRLNEPRYATLPNIMKAKKKKIEVIKPGDL 214
Query: 178 NVNINTGLNIIKVKESHKNNLGIKVKNVIELIDKLKNEAKI 218
V++ + L++I V++ + G+KV+ +L+ KLK +I
Sbjct: 215 GVDLTSKLSVISVEDPPQRTAGVKVETTEDLVAKLKEIGRI 255
>sp|Q68FU3|ETFB_RAT Electron transfer flavoprotein subunit beta OS=Rattus norvegicus
GN=Etfb PE=2 SV=3
Length = 255
Score = 211 bits (537), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 106/221 (47%), Positives = 152/221 (68%), Gaps = 6/221 (2%)
Query: 2 SINPFDEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTI- 60
S+NPF EIA+E A+RL+E +KEIIA+SCG +C+E ++ A+AMG DR I +E
Sbjct: 37 SMNPFCEIAVEEAVRLKEK-KLVKEIIAVSCGPPQCQETIRTALAMGADRGIHVEVPGAE 95
Query: 61 ---LQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASKIVL 117
L L VA++L + +KE L+ LGKQ+ID D NQTGQM A LL+WPQ TFAS++ L
Sbjct: 96 AENLGPLQVARVLAKLAEKEKVDLLFLGKQAIDDDCNQTGQMTAGLLDWPQGTFASQVTL 155
Query: 118 KKNNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFKIDEL 177
+ +K+ V +EI+ G ETI L LPA++T DLR+NEPRY TL NI+KA+KK I + K +L
Sbjct: 156 E-GDKVKVEREIDGGLETIRLKLPAVVTADLRLNEPRYATLPNIMKAKKKKIEVIKAGDL 214
Query: 178 NVNINTGLNIIKVKESHKNNLGIKVKNVIELIDKLKNEAKI 218
V++ + +++I V+E + G+KV+ +L+ KLK +I
Sbjct: 215 GVDLTSKVSVISVEEPPQRLAGVKVETTEDLVAKLKEVGRI 255
>sp|P38117|ETFB_HUMAN Electron transfer flavoprotein subunit beta OS=Homo sapiens GN=ETFB
PE=1 SV=3
Length = 255
Score = 211 bits (537), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 104/221 (47%), Positives = 152/221 (68%), Gaps = 6/221 (2%)
Query: 2 SINPFDEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTI- 60
S+NPF EIA+E A+RL+E +KE+IA+SCG +C+E ++ A+AMG DR I +E
Sbjct: 37 SMNPFCEIAVEEAVRLKEK-KLVKEVIAVSCGPAQCQETIRTALAMGADRGIHVEVPPAE 95
Query: 61 ---LQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASKIVL 117
L L VA++L + +KE LV+LGKQ+ID D NQTGQM A L+WPQ TFAS++ L
Sbjct: 96 AERLGPLQVARVLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQVTL 155
Query: 118 KKNNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFKIDEL 177
+ +K+ V +EI+ G ET+ L LPA++T DLR+NEPRY TL NI+KA+KK I + K +L
Sbjct: 156 E-GDKLKVEREIDGGLETLRLKLPAVVTADLRLNEPRYATLPNIMKAKKKKIEVIKPGDL 214
Query: 178 NVNINTGLNIIKVKESHKNNLGIKVKNVIELIDKLKNEAKI 218
V++ + L++I V++ + G+KV+ +L+ KLK +I
Sbjct: 215 GVDLTSKLSVISVEDPPQRTAGVKVETTEDLVAKLKEIGRI 255
>sp|Q6UAQ8|ETFB_PIG Electron transfer flavoprotein subunit beta OS=Sus scrofa GN=ETFB
PE=2 SV=3
Length = 255
Score = 210 bits (534), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 102/221 (46%), Positives = 152/221 (68%), Gaps = 6/221 (2%)
Query: 2 SINPFDEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTI- 60
S+NPF EIA+E A+RL+E +KE+IA+SCG +C+E ++ A+AMG DR I +E
Sbjct: 37 SMNPFCEIAVEEAVRLKEK-KLVKEVIAVSCGPAQCQETIRTALAMGADRGIHVEVPAAE 95
Query: 61 ---LQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASKIVL 117
L L VA++L + +KE LV+LGKQ+ID D NQTGQM A L+WPQ TFAS++ L
Sbjct: 96 AHHLGPLQVARVLAKLAQKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQVTL 155
Query: 118 KKNNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFKIDEL 177
+ +K+ V +EI+ G ET+ L LPA++T DLR+NEPRY TL NI+KA+KK I + K +L
Sbjct: 156 E-GDKVKVEREIDGGLETLRLKLPAVVTADLRLNEPRYATLPNIMKAKKKKIEVIKAGDL 214
Query: 178 NVNINTGLNIIKVKESHKNNLGIKVKNVIELIDKLKNEAKI 218
V++ + L+++ V++ + G+KV+ +L+ KL+ +I
Sbjct: 215 GVDLTSKLSVVSVEDPPQRVAGVKVETTEDLVAKLREIGRI 255
>sp|P38975|ETFB_PARDE Electron transfer flavoprotein subunit beta OS=Paracoccus
denitrificans GN=etfB PE=1 SV=1
Length = 252
Score = 208 bits (530), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 110/223 (49%), Positives = 155/223 (69%), Gaps = 7/223 (3%)
Query: 1 MSINPFDEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILI-ETDT 59
MS+NPFDEIA+E AIRL+E + +EIIA+S G K+ E L+ A+AMG DRAIL+ D
Sbjct: 33 MSMNPFDEIAVEEAIRLKEK-GQAEEIIAVSIGVKQAAETLRTALAMGADRAILVVAADD 91
Query: 60 ILQS---LSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASKIV 116
+ Q L+VAK+L + + E +L+I GKQ+ID+D N TGQMLAA+L W QATFASK+
Sbjct: 92 VQQDIEPLAVAKILAAVARAEGTELIIAGKQAIDNDMNATGQMLAAILGWAQATFASKVE 151
Query: 117 LKKNNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFKIDE 176
++ K VT+E++ G +TI +SLPA++T DLR+NEPRY +L NI+KA+KK ++ +
Sbjct: 152 IE-GAKAKVTREVDGGLQTIAVSLPAVVTADLRLNEPRYASLPNIMKAKKKPLDEKTAAD 210
Query: 177 LNVNINTGLNIIKVKESHKNNLGIKVKNVIELIDKLKNEAKII 219
V++ L ++ V+E GIKV +V EL+ KLK EA +I
Sbjct: 211 YGVDVAPRLEVVSVREPEGRKAGIKVGSVDELVGKLK-EAGVI 252
>sp|P42940|ETFB_YEAST Probable electron transfer flavoprotein subunit beta
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=CIR1 PE=1 SV=1
Length = 261
Score = 185 bits (469), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/218 (46%), Positives = 149/218 (68%), Gaps = 5/218 (2%)
Query: 1 MSINPFDEIAIESAIRLRESSNKIKEII-AISCGNKKCKEILQIAMAMGVDRAILIET-- 57
SINPFD+IA+E AIR++E + + E A+S G+ K ++IL+ +A G+D LI++
Sbjct: 39 FSINPFDDIAVEEAIRIKEKNKSLVESTHAVSIGSAKAQDILRNCLAKGIDTCSLIDSVG 98
Query: 58 DTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASKIVL 117
++ L++AK+L+ +V+K+ LV++GKQ+ID D N TGQMLA LLNWPQAT A+K+
Sbjct: 99 KENIEPLAIAKILKAVVEKKGSNLVLMGKQAIDDDCNNTGQMLAGLLNWPQATNAAKVEF 158
Query: 118 KKNNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFKI--D 175
N ++ VT+EI+DG+E I SLP +ITTDLR+N PRYV L ++KA+KK I I D
Sbjct: 159 LDNGRVQVTREIDDGEEVIEASLPMVITTDLRLNTPRYVGLPKLMKAKKKPIEKLDIAKD 218
Query: 176 ELNVNINTGLNIIKVKESHKNNLGIKVKNVIELIDKLK 213
+NI L I+ ++E + G+K+ +V ELI+KLK
Sbjct: 219 FPEINIEPQLKIVSMEEPKTKSPGVKLNSVDELIEKLK 256
>sp|Q9UTH2|ETFB_SCHPO Probable electron transfer flavoprotein subunit beta
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC1805.02c PE=3 SV=1
Length = 254
Score = 181 bits (458), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 145/215 (67%), Gaps = 3/215 (1%)
Query: 1 MSINPFDEIAIESAIRLRES-SNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIET-D 58
MSINPF +IA+E AIR++E+ N+I++ + ++ G + IL+ +A G+ RA LI +
Sbjct: 36 MSINPFCDIAVEEAIRMKETLKNRIEDTLVVTAGQTSSEPILRQCLAKGIGRAALINVGE 95
Query: 59 TILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASKIVLK 118
L+ LSVAKLL+ V+KE LV+LGKQ+ID D +QTG MLAA+L WPQ T ASK+ ++
Sbjct: 96 KELEPLSVAKLLKATVEKEKSNLVLLGKQAIDDDAHQTGGMLAAMLGWPQFTSASKVRIE 155
Query: 119 KNNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFKIDELN 178
+K++VT+EI+ G+ET+ +LPAIITTDLR+N PR+ L ++KARK + ++L
Sbjct: 156 -GDKVIVTREIDGGEETLSSTLPAIITTDLRLNVPRFANLAKVMKARKAPLGKMSPEDLG 214
Query: 179 VNINTGLNIIKVKESHKNNLGIKVKNVIELIDKLK 213
V I+ L + V E + I VK+V E++ LK
Sbjct: 215 VTIDQRLQTVSVSEPVQKRQNIMVKSVDEMVKTLK 249
>sp|P97089|ETFB_THETC Electron transfer flavoprotein subunit beta
OS=Thermoanaerobacterium thermosaccharolyticum (strain
ATCC 7956 / DSM 571 / NCIB 9385 / NCA 3814) GN=etfB PE=3
SV=1
Length = 260
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 101/184 (54%), Gaps = 8/184 (4%)
Query: 3 INPFDEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTIL- 61
INP D+ A+E AIR+RE ++ IS G + + L+ A+AMG D A L+ TD
Sbjct: 34 INPDDKNALEEAIRIREKVGG--KVTVISMGPTQAEVALREALAMGADEAYLL-TDRAFA 90
Query: 62 --QSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASKIVLKK 119
+ + AK L ++K +V G+Q+ID D Q G +A L+ PQ T+ K+ + +
Sbjct: 91 GADTYATAKALSKAIEKFQYDIVFCGRQAIDGDTAQVGPQIAEQLDIPQVTYVRKVEI-E 149
Query: 120 NNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKAR-KKNINIFKIDELN 178
+K++V + +EDG E I + P ++T +N PRY ++ I A KK + I D+L
Sbjct: 150 GDKLIVERALEDGYEIIEVKTPVLLTAIKELNVPRYPSIKGIFNAYNKKEVKILTADDLE 209
Query: 179 VNIN 182
V+ N
Sbjct: 210 VDKN 213
>sp|P53570|ETFB_METME Electron transfer flavoprotein subunit beta OS=Methylophilus
methylotrophus GN=etfB PE=1 SV=1
Length = 264
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 106/184 (57%), Gaps = 4/184 (2%)
Query: 3 INPFDEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQ 62
+N +D+ ++E A++++ESS+ E++ +S G + E L+ +A G DRA+ + D
Sbjct: 35 LNEWDDFSLEEAMKIKESSDTDVEVVVVSVGPDRVDESLRKCLAKGADRAVRVWDDAAEG 94
Query: 63 S--LSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASKIVLKK- 119
S + V ++L ++KKE P +V G QS D TG +A+ LNWP A + + K
Sbjct: 95 SDAIVVGRILTEVIKKEAPDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVADLQYKPG 154
Query: 120 NNKILVTQEIEDGK-ETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFKIDELN 178
+NK ++ +E+E G + + ++ PA++T L +N+PRY +L I +A K I + ++
Sbjct: 155 DNKAVIRRELEGGMLQEVEINCPAVLTIQLGINKPRYASLRGIKQAATKPIEEVSLADIG 214
Query: 179 VNIN 182
++ N
Sbjct: 215 LSAN 218
>sp|O85691|ETFB_MEGEL Electron transfer flavoprotein subunit beta OS=Megasphaera elsdenii
GN=etfB PE=3 SV=1
Length = 270
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 98/176 (55%), Gaps = 11/176 (6%)
Query: 3 INPFDEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIE------ 56
NPFD+ A+E+A+ L+++ +K I +S G + K++L+ +AMG D A L+
Sbjct: 34 FNPFDQNALEAALALKDADKDVK-ITLLSMGPDQAKDVLREGLAMGADDAYLLSDRKLGG 92
Query: 57 TDTILQSLSVAKLLQVIVKK---ENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFAS 113
+DT+ ++A+ ++ + E +++ GKQ+ID D Q G +A L PQ T+A
Sbjct: 93 SDTLATGYALAQAIKKLAADKGIEQFDIILCGKQAIDGDTAQVGPQIACELGIPQITYAR 152
Query: 114 KIVLKKNNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNI 169
I ++ +K+ V QE E+G P +IT +NEPR+ T+ +KA+++ I
Sbjct: 153 DIKVE-GDKVTVQQENEEGYIVTEAQFPVLITAVKDLNEPRFPTIRGTMKAKRREI 207
>sp|P52040|ETFB_CLOAB Electron transfer flavoprotein subunit beta OS=Clostridium
acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 /
LMG 5710 / VKM B-1787) GN=etfB PE=3 SV=2
Length = 259
Score = 94.0 bits (232), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 115/220 (52%), Gaps = 14/220 (6%)
Query: 3 INPFDEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTIL- 61
INP D+ A+E A+ L++ N + IS G + K L A+AMG D A+L+ TD
Sbjct: 34 INPDDKNALEEALVLKD--NYGAHVTVISMGPPQAKNALVEALAMGADEAVLL-TDRAFG 90
Query: 62 --QSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASKIVLKK 119
+L+ + + +KK +V G+Q+ID D Q G +A L PQ T+ K+ +
Sbjct: 91 GADTLATSHTIAAGIKKLKYDIVFAGRQAIDGDTAQVGPEIAEHLGIPQVTYVEKVEVD- 149
Query: 120 NNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFKIDELNV 179
+ + + + EDG E + + P ++T +N PRY+++ I A K + ++ D+++V
Sbjct: 150 GDTLKIRKAWEDGYEVVEVKTPVLLTAIKELNVPRYMSVEKIFGAFDKEVKMWTADDIDV 209
Query: 180 N-INTGL--NIIKVKESHKNNLGIKVKNVIELIDKLKNEA 216
+ N GL + KVK+S +VK E+IDK EA
Sbjct: 210 DKANLGLKGSPTKVKKSSTK----EVKGQGEVIDKPVKEA 245
>sp|P94550|ETFB_BACSU Electron transfer flavoprotein subunit beta OS=Bacillus subtilis
(strain 168) GN=etfB PE=3 SV=1
Length = 257
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 124/228 (54%), Gaps = 14/228 (6%)
Query: 3 INPFDEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQ 62
INP+DE AIE AI+L+E I A++ G ++ ++ L+ A+AMG D+A+LI + L
Sbjct: 33 INPYDEYAIEEAIQLKEKHGGT--ITAVTVGGEEAEKELRTALAMGCDQAVLINIEDDLD 90
Query: 63 S---LSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASKIVLKK 119
S++++L +K + L++ G +ID + Q LA LL+ P T +K+ +
Sbjct: 91 EPDQYSISQVLYHYMKDQEFDLILGGNVAIDGGSGQVAPRLAELLDIPCITTITKLEING 150
Query: 120 NNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFKIDELNV 179
+ +++E E I +LP ++T +NEPRY +L I+KA+KK + ++D+L++
Sbjct: 151 TDA-EAERDVEGDVEKIKTTLPLLVTAQQGLNEPRYPSLPGIMKAKKKPLEELELDDLDL 209
Query: 180 NINTGLNIIKV--------KESHKNNLGIKVKNVIELIDKLKNEAKII 219
+ +K KE+ K G + EL+ L++EAK+I
Sbjct: 210 DEEDAEPKLKTIERFLPPKKEAGKLLQGEPAEQAKELVSLLRSEAKVI 257
>sp|P64097|ETFB_MYCTU Electron transfer flavoprotein subunit beta OS=Mycobacterium
tuberculosis GN=etfB PE=3 SV=1
Length = 266
Score = 84.3 bits (207), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 104/186 (55%), Gaps = 13/186 (6%)
Query: 3 INPFDEIAIESAIRLRE--SSNKIK-EIIAISCGNKKCKEILQIAMAMGVDRAILIE--- 56
++ +E A+E A+++RE +++ I+ + ++ G ++ E ++ A++MG D+A+ ++
Sbjct: 36 LDEINERAVEEALQIREKEAADGIEGSVTVLTAGPERATEAIRKALSMGADKAVHLKDDG 95
Query: 57 ---TDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFAS 113
+D I ++A+ L I E +LVI G +S D ++A L PQ T
Sbjct: 96 MHGSDVIQTGWALARALGTI---EGTELVIAGNESTDGVGGAVPAIIAEYLGLPQLTHLR 152
Query: 114 KIVLKKNNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFK 173
K+ ++ KI +E ++G T+ +LPA+I+ + ++NEPR+ + I+ A+KK + +
Sbjct: 153 KVSIE-GGKITGERETDEGVFTLEATLPAVISVNEKINEPRFPSFKGIMAAKKKEVTVLT 211
Query: 174 IDELNV 179
+ E+ V
Sbjct: 212 LAEIGV 217
>sp|P64098|ETFB_MYCBO Electron transfer flavoprotein subunit beta OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=etfB PE=1 SV=1
Length = 266
Score = 84.3 bits (207), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 104/186 (55%), Gaps = 13/186 (6%)
Query: 3 INPFDEIAIESAIRLRE--SSNKIK-EIIAISCGNKKCKEILQIAMAMGVDRAILIE--- 56
++ +E A+E A+++RE +++ I+ + ++ G ++ E ++ A++MG D+A+ ++
Sbjct: 36 LDEINERAVEEALQIREKEAADGIEGSVTVLTAGPERATEAIRKALSMGADKAVHLKDDG 95
Query: 57 ---TDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFAS 113
+D I ++A+ L I E +LVI G +S D ++A L PQ T
Sbjct: 96 MHGSDVIQTGWALARALGTI---EGTELVIAGNESTDGVGGAVPAIIAEYLGLPQLTHLR 152
Query: 114 KIVLKKNNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFK 173
K+ ++ KI +E ++G T+ +LPA+I+ + ++NEPR+ + I+ A+KK + +
Sbjct: 153 KVSIE-GGKITGERETDEGVFTLEATLPAVISVNEKINEPRFPSFKGIMAAKKKEVTVLT 211
Query: 174 IDELNV 179
+ E+ V
Sbjct: 212 LAEIGV 217
>sp|O33095|ETFB_MYCLE Electron transfer flavoprotein subunit beta OS=Mycobacterium leprae
(strain TN) GN=etfB PE=3 SV=1
Length = 266
Score = 81.6 bits (200), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 103/189 (54%), Gaps = 13/189 (6%)
Query: 3 INPFDEIAIESAIRLRE--SSNKIK-EIIAISCGNKKCKEILQIAMAMGVDRAILIE--- 56
++ +E A+E A+++RE + + IK + ++ G ++ E ++ A++MG D+A+ ++
Sbjct: 36 LDEINERAVEEALQIREKEAVDGIKGSVTVLTAGPERATEAIRKALSMGADKAVHLKDDG 95
Query: 57 ---TDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFAS 113
+D I ++A+ L I E +LVI G +S D ++A L PQ T
Sbjct: 96 MHGSDVIQTGWALARALGTI---EGTELVIAGNESTDGVGGVVPAIIAEYLGLPQLTHLR 152
Query: 114 KIVLKKNNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFK 173
I ++ KI +E ++G T+ LPA+++ + ++NEPR+ + I+ A+KK + +
Sbjct: 153 TISVE-GGKITGERETDEGVFTLEAVLPAVVSVNEKINEPRFPSFKGIMAAKKKEVTVLT 211
Query: 174 IDELNVNIN 182
+ E+ V ++
Sbjct: 212 LAEIGVEVD 220
>sp|P53576|FIXA_AZOVI Protein FixA OS=Azotobacter vinelandii GN=fixA PE=3 SV=1
Length = 281
Score = 78.2 bits (191), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 103/199 (51%), Gaps = 13/199 (6%)
Query: 3 INPFDEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIE------ 56
INP+D A+E A+RL++ + ++ G + L+ ++ G D AIL+
Sbjct: 34 INPYDLFALEEALRLKDKFGGT--VTVVTMGPPMAEAALRKCLSFGADDAILVSDRAFAG 91
Query: 57 TDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASKIV 116
+DT+ S +++ +++ I++ L+ GKQ+ID D Q G +A L++ T+ S+IV
Sbjct: 92 SDTLATSYALSAVIRKIMEDMPVDLIFTGKQTIDGDTAQVGPGIAKRLDYQLLTYVSRIV 151
Query: 117 LKKNNK--ILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFKI 174
K I V + E G + + SLP +IT NE R+ L ++ +A + + ++
Sbjct: 152 DVDTAKKEIQVERRAEGGVQLLETSLPCLITMLEGTNEMRFGDLDDLFRAARHELKVW-- 209
Query: 175 DELNVNINTGLNIIKVKES 193
D + I+T + +I +K S
Sbjct: 210 DRVAAGIDT-VEMIGLKGS 227
>sp|P53577|FIXA_BRAJA Protein FixA OS=Bradyrhizobium japonicum (strain USDA 110) GN=fixA
PE=3 SV=2
Length = 288
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 89/176 (50%), Gaps = 11/176 (6%)
Query: 3 INPFDEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIE------ 56
INP+D A+E+A+ LR+ EI ++ G +E L+ A+ G DRA+L+
Sbjct: 34 INPYDLFALEAALGLRDRFGG--EITVLTMGPPSAEESLRKALTYGADRAVLLTDRCFAG 91
Query: 57 TDTILQSLSVAKLLQVIVKKENPQ-LVILGKQSIDSDNNQTGQMLAALLNWPQATFASKI 115
+DT+ + ++A ++ I K+ P L+ GKQ+ID D Q G +A L Q T+ +K+
Sbjct: 92 SDTLATTYALATAIRKIGKEYGPANLIFTGKQTIDGDTAQVGPGIAKRLGVGQLTYVAKV 151
Query: 116 --VLKKNNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNI 169
V N I + E G + + LP +IT N+ R + + ++A + I
Sbjct: 152 RSVDVANETIEAERRSEGGVQVLHTRLPCLITMLEATNQIRRGAMADALRAARAKI 207
>sp|Q53210|FIXA_RHISN Protein FixA OS=Rhizobium sp. (strain NGR234) GN=fixA PE=3 SV=1
Length = 285
Score = 73.9 bits (180), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 88/179 (49%), Gaps = 17/179 (9%)
Query: 3 INPFDEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIE------ 56
INP+D A+E A+++R+ E+ ++ G +E L+ A+ G DRAIL+
Sbjct: 34 INPYDLFALEQALQVRDHHGG--EVTVLTMGPPMAEESLRKALTYGADRAILLTDRHFAG 91
Query: 57 TDTILQSLSVAKLLQVIVKKEN----PQLVILGKQSIDSDNNQTGQMLAALLNWPQATFA 112
+DT+ S + L Q I K N P +V GKQ+ID D Q G +A L+ Q T+
Sbjct: 92 SDTLATSFA---LSQAIAKIGNSFGSPDIVFTGKQTIDGDTAQVGPGIAKRLDLVQLTYV 148
Query: 113 SKI--VLKKNNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNI 169
+K+ + + I V + E G + LP +IT N R +L + ++A + I
Sbjct: 149 AKVTSIDLRTRAITVERRAEGGTHVLKSELPCLITMLEGSNAIRRGSLDDALRAARSEI 207
>sp|P09818|FIXA_RHIME Protein FixA OS=Rhizobium meliloti (strain 1021) GN=fixA PE=3 SV=1
Length = 292
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 80/152 (52%), Gaps = 11/152 (7%)
Query: 3 INPFDEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIE------ 56
INP D A+E A++L ++ E+ ++ G K ++ L+ A+ G RA+L+
Sbjct: 34 INPHDLAALEEALKLCDTYGG--EVTVVTMGPKMAEDALRKALTFGAHRAVLLTDRHFAG 91
Query: 57 TDTILQSLSVAKLLQVIVKK-ENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASKI 115
+DT+ S ++A+ + I + P +V GKQ+ID D Q G +A L+ Q T+ +KI
Sbjct: 92 SDTLATSFALAQAIAEIGETFGTPDVVFTGKQTIDGDTAQVGPGIAKRLDLQQLTYVAKI 151
Query: 116 --VLKKNNKILVTQEIEDGKETILLSLPAIIT 145
+ + +I V + E G + + LP ++T
Sbjct: 152 LSIDAASREITVERRAEGGSQILRTGLPCLVT 183
>sp|Q8FLA3|FIXA_ECOL6 Protein FixA OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928
/ UPEC) GN=fixA PE=3 SV=2
Length = 256
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 93/186 (50%), Gaps = 13/186 (6%)
Query: 3 INPFDEIAIESAIRLRESSNKIKEIIAISCGNKKC------KEILQIAMAMGVDRAILIE 56
I+ +D AIE+A +L++ + + ++ A+S G K K++L + G D I++
Sbjct: 34 ISQYDLNAIEAACQLKQQAAE-AQVTALSVGGKALTNAKGRKDVL----SRGPDELIVVI 88
Query: 57 TDTILQSLS--VAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASK 114
D Q+L A +L +K L++ G S D Q G ++ +LN P SK
Sbjct: 89 DDQFEQALPQQTASVLAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAVNGVSK 148
Query: 115 IVLKKNNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFKI 174
I+ + + V +E+ED ET+ + LPA++ +N P+ ++ I+ A KK + ++
Sbjct: 149 IISLTADTLTVERELEDETETLSIPLPAVVAVSTDINSPQIPSMKAILGAAKKPVQVWSA 208
Query: 175 DELNVN 180
++ N
Sbjct: 209 ADIGFN 214
>sp|B7MAG4|FIXA_ECO45 Protein FixA OS=Escherichia coli O45:K1 (strain S88 / ExPEC)
GN=fixA PE=3 SV=1
Length = 256
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 93/186 (50%), Gaps = 13/186 (6%)
Query: 3 INPFDEIAIESAIRLRESSNKIKEIIAISCGNKKC------KEILQIAMAMGVDRAILIE 56
I+ +D AIE+A +L++ + + ++ A+S G K K++L + G D I++
Sbjct: 34 ISQYDLNAIEAACQLKQQAAE-AQVTALSVGGKALTNAKGRKDVL----SRGPDELIVVI 88
Query: 57 TDTILQSLS--VAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASK 114
D Q+L A +L +K L++ G S D Q G ++ +LN P SK
Sbjct: 89 DDQFEQALPQQTASVLAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAVNGVSK 148
Query: 115 IVLKKNNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFKI 174
I+ + + V +E+ED ET+ + LPA++ +N P+ ++ I+ A KK + ++
Sbjct: 149 IISLTADTLTVERELEDETETLSIPLPAVVAVSTDINSPQIPSMKAILGAAKKPVQVWSA 208
Query: 175 DELNVN 180
++ N
Sbjct: 209 ADIGFN 214
>sp|B7UI87|FIXA_ECO27 Protein FixA OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC)
GN=fixA PE=3 SV=1
Length = 256
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 93/186 (50%), Gaps = 13/186 (6%)
Query: 3 INPFDEIAIESAIRLRESSNKIKEIIAISCGNKKC------KEILQIAMAMGVDRAILIE 56
I+ +D AIE+A +L++ + + ++ A+S G K K++L + G D I++
Sbjct: 34 ISQYDLNAIEAACQLKQQAAE-AQVTALSVGGKALTNAKGRKDVL----SRGPDELIVVI 88
Query: 57 TDTILQSLS--VAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASK 114
D Q+L A +L +K L++ G S D Q G ++ +LN P SK
Sbjct: 89 DDQFEQALPQQTASVLAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAVNGVSK 148
Query: 115 IVLKKNNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFKI 174
I+ + + V +E+ED ET+ + LPA++ +N P+ ++ I+ A KK + ++
Sbjct: 149 IISLTADTLTVERELEDETETLSIPLPAVVAVSTDINSPQIPSMKAILGAAKKPVQVWSA 208
Query: 175 DELNVN 180
++ N
Sbjct: 209 ADIGFN 214
>sp|Q0TLU8|FIXA_ECOL5 Protein FixA OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC)
GN=fixA PE=3 SV=1
Length = 256
Score = 67.0 bits (162), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 93/186 (50%), Gaps = 13/186 (6%)
Query: 3 INPFDEIAIESAIRLRESSNKIKEIIAISCGNKKC------KEILQIAMAMGVDRAILIE 56
I+ +D AIE+A +L++ + + ++ A+S G K K++L + G D I++
Sbjct: 34 ISQYDLNAIEAACQLKQQAVE-AQVTALSVGGKALTNAKGRKDVL----SRGPDELIVVI 88
Query: 57 TDTILQSLS--VAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASK 114
D Q+L A +L +K L++ G S D Q G ++ +LN P SK
Sbjct: 89 DDQFEQALPQQTASVLAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAVNGVSK 148
Query: 115 IVLKKNNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFKI 174
I+ + + V +E+ED ET+ + LPA++ +N P+ ++ I+ A KK + ++
Sbjct: 149 IISLTADTLTVERELEDETETLSIPLPAVVAVSTDINSPQIPSMKAILGAAKKPVQVWSA 208
Query: 175 DELNVN 180
++ N
Sbjct: 209 ADIGFN 214
>sp|B7MNP8|FIXA_ECO81 Protein FixA OS=Escherichia coli O81 (strain ED1a) GN=fixA PE=3
SV=1
Length = 256
Score = 67.0 bits (162), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 93/186 (50%), Gaps = 13/186 (6%)
Query: 3 INPFDEIAIESAIRLRESSNKIKEIIAISCGNKKC------KEILQIAMAMGVDRAILIE 56
I+ +D AIE+A +L++ + + ++ A+S G K K++L + G D I++
Sbjct: 34 ISQYDLNAIEAACQLKQQAVE-AQVTALSVGGKALTNAKGRKDVL----SRGPDELIVVI 88
Query: 57 TDTILQSLS--VAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASK 114
D Q+L A +L +K L++ G S D Q G ++ +LN P SK
Sbjct: 89 DDQFEQALPQQTASVLAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAVNGVSK 148
Query: 115 IVLKKNNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFKI 174
I+ + + V +E+ED ET+ + LPA++ +N P+ ++ I+ A KK + ++
Sbjct: 149 IISLTADTLTVERELEDETETLSIPLPAVVAVSTDINSPQIPSMKAILGAAKKPVQVWSA 208
Query: 175 DELNVN 180
++ N
Sbjct: 209 ADIGFN 214
>sp|P26482|FIXA_AZOC5 Protein FixA OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM
5975 / ORS 571) GN=fixA PE=3 SV=1
Length = 281
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 92/186 (49%), Gaps = 11/186 (5%)
Query: 3 INPFDEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIE------ 56
INP+D A+E+A+ LR+ E+ ++ G ++ L+ A+ G DRA+L+
Sbjct: 34 INPYDLFALEAALALRDQHGG--EVTVLTMGPPSAEDSLRKALTFGADRAVLLTDRFFAG 91
Query: 57 TDTILQSLSVAKLLQVIVKKEN-PQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASKI 115
+DT+ + ++A ++ I + P +V GKQ+ID D Q G +A L Q T+ +KI
Sbjct: 92 SDTLATTYALATAVRKIGETFGAPDIVFTGKQTIDGDTAQVGPGIAKRLGLLQLTYVAKI 151
Query: 116 --VLKKNNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFK 173
V I V + E G + + LP +IT NE R + + ++A + + I+
Sbjct: 152 ANVDLAGRSIQVERRSEGGVQVLQTRLPCLITMLEATNEIRRGAMADALRAARAEVVIWS 211
Query: 174 IDELNV 179
+ V
Sbjct: 212 AKDAGV 217
>sp|Q05559|FIXA_RHILP Protein FixA OS=Rhizobium leguminosarum bv. phaseoli GN=fixA PE=3
SV=1
Length = 279
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 91/177 (51%), Gaps = 15/177 (8%)
Query: 3 INPFDEIAIESAIRLRES-SNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIE----- 56
INP+D A+E R S ++ E+ ++ G ++ L+ A+ + DRA+L+
Sbjct: 34 INPYDLFALEE----RSSCASHGGEVTVLTMGPPMAEDALRKALTV-ADRAVLLTERHFA 88
Query: 57 -TDTILQSLSVAKLLQVIVKK-ENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASK 114
+DT+ S ++++ + I + P +V KQ+ID D Q G +A L+ Q T+ +K
Sbjct: 89 GSDTLATSFALSRAIAKIGEAFGTPDIVFTAKQTIDGDTAQVGPGIAKRLDLLQLTYVAK 148
Query: 115 IVLKKNN--KILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNI 169
IV N +I V + E G +T++ LP +IT NE R +L + ++A + I
Sbjct: 149 IVSVDINGREITVERRSEGGTQTLMSKLPCLITMLEGTNEIRRGSLDDALRAARSQI 205
>sp|B4T6K2|FIXA_SALNS Protein FixA OS=Salmonella newport (strain SL254) GN=fixA PE=3 SV=1
Length = 256
Score = 60.5 bits (145), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 92/186 (49%), Gaps = 13/186 (6%)
Query: 3 INPFDEIAIESAIRLRESSNKIKEIIAISCGNKKC------KEILQIAMAMGVDRAILIE 56
I+ +D AIE+A +L++ +++A+S G K K++L + G D I++
Sbjct: 34 ISQYDLNAIEAACQLKQQLGD-AQVVAMSVGGKALTNAKGRKDVL----SRGPDELIVVI 88
Query: 57 TDTILQSLS--VAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASK 114
D Q+L A L +K L+I G S D Q G ++ LN P SK
Sbjct: 89 DDQFEQALPQQTASALAAAAQKSGFDLLICGDGSSDLYAQQVGLLVGEALNIPAINGVSK 148
Query: 115 IVLKKNNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFKI 174
I+ ++ + V +E+ED ET+ + LPA+I +N P+ ++ I+ A KK + ++
Sbjct: 149 ILSLTDSTLTVERELEDEVETLSIPLPAVIAVSTDINTPQIPSMKAILGAAKKPVQVWSP 208
Query: 175 DELNVN 180
++ +N
Sbjct: 209 ADIGLN 214
>sp|B5F756|FIXA_SALA4 Protein FixA OS=Salmonella agona (strain SL483) GN=fixA PE=3 SV=1
Length = 256
Score = 60.5 bits (145), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 92/186 (49%), Gaps = 13/186 (6%)
Query: 3 INPFDEIAIESAIRLRESSNKIKEIIAISCGNKKC------KEILQIAMAMGVDRAILIE 56
I+ +D AIE+A +L++ +++A+S G K K++L + G D I++
Sbjct: 34 ISQYDLNAIEAACQLKQQLGD-AQVVAMSVGGKALTNAKGRKDVL----SRGPDELIVVI 88
Query: 57 TDTILQSLS--VAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASK 114
D Q+L A L +K L+I G S D Q G ++ LN P SK
Sbjct: 89 DDQFEQALPQQTASALAAAAQKSGFDLLICGDGSSDLYAQQVGLLVGEALNIPAINGVSK 148
Query: 115 IVLKKNNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFKI 174
I+ ++ + V +E+ED ET+ + LPA+I +N P+ ++ I+ A KK + ++
Sbjct: 149 ILSLTDSTLTVERELEDEVETLSIPLPAVIAVSTDINTPQIPSMKAILGAAKKPVQVWSP 208
Query: 175 DELNVN 180
++ +N
Sbjct: 209 ADIGLN 214
>sp|B5RGA8|FIXA_SALG2 Protein FixA OS=Salmonella gallinarum (strain 287/91 / NCTC 13346)
GN=fixA PE=3 SV=1
Length = 256
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 92/186 (49%), Gaps = 13/186 (6%)
Query: 3 INPFDEIAIESAIRLRESSNKIKEIIAISCGNKKC------KEILQIAMAMGVDRAILIE 56
I+ +D AIE+A +L++ +++A+S G K K++L + G D I++
Sbjct: 34 ISQYDLNAIEAACQLKQQLGD-AQVVAMSVGGKALTNAKGRKDVL----SRGPDELIVVI 88
Query: 57 TDTILQSLS--VAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASK 114
D Q+L A L +K L+I G S D Q G ++ LN P SK
Sbjct: 89 DDQFEQALPQHTATALAAAAQKSGFDLLICGDGSSDLYAQQVGLLVGEALNIPAINGVSK 148
Query: 115 IVLKKNNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFKI 174
I+ ++ + V +E+ED ET+ + LPA+I +N P+ ++ I+ A KK + ++
Sbjct: 149 ILSLTDSTLTVERELEDEVETLSIPLPAVIAVSTDINTPQIPSMKAILGAAKKPVQVWSP 208
Query: 175 DELNVN 180
++ +N
Sbjct: 209 ADIGLN 214
>sp|B5FHH0|FIXA_SALDC Protein FixA OS=Salmonella dublin (strain CT_02021853) GN=fixA PE=3
SV=1
Length = 256
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 92/186 (49%), Gaps = 13/186 (6%)
Query: 3 INPFDEIAIESAIRLRESSNKIKEIIAISCGNKKC------KEILQIAMAMGVDRAILIE 56
I+ +D AIE+A +L++ +++A+S G K K++L + G D I++
Sbjct: 34 ISQYDLNAIEAACQLKQQLGD-AQVVAMSVGGKALTNAKGRKDVL----SRGPDELIVVI 88
Query: 57 TDTILQSLS--VAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASK 114
D Q+L A L +K L+I G S D Q G ++ LN P SK
Sbjct: 89 DDQFEQALPQHTATALAAAAQKSGFDLLICGDGSSDLYAQQVGLLVGEALNIPAINGVSK 148
Query: 115 IVLKKNNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFKI 174
I+ ++ + V +E+ED ET+ + LPA+I +N P+ ++ I+ A KK + ++
Sbjct: 149 ILSLTDSTLTVERELEDEVETLSIPLPAVIAVSTDINTPQIPSMKAILGAAKKPVQVWSP 208
Query: 175 DELNVN 180
++ +N
Sbjct: 209 ADIGLN 214
>sp|Q8ZRX0|FIXA_SALTY Protein FixA OS=Salmonella typhimurium (strain LT2 / SGSC1412 /
ATCC 700720) GN=fixA PE=3 SV=1
Length = 256
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 92/186 (49%), Gaps = 13/186 (6%)
Query: 3 INPFDEIAIESAIRLRESSNKIKEIIAISCGNKKC------KEILQIAMAMGVDRAILIE 56
I+ +D AIE+A +L++ +++A+S G K K++L + G D I++
Sbjct: 34 ISQYDLNAIEAACQLKQQLGD-AQVVAMSVGGKALTNAKGRKDVL----SRGPDELIVVI 88
Query: 57 TDTILQSLS--VAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASK 114
D Q+L A L +K L+I G S D Q G ++ LN P SK
Sbjct: 89 DDQFEQALPQHTATALAAAAQKSGFDLLICGDGSSDLYAQQVGLLVGEALNIPAINGVSK 148
Query: 115 IVLKKNNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFKI 174
I+ ++ + V +E+ED ET+ + LPA+I +N P+ ++ I+ A KK + ++
Sbjct: 149 ILSLTDSTLTVERELEDEVETLSIPLPAVIAVSTDINTPQIPSMKAILGAAKKPVQVWSP 208
Query: 175 DELNVN 180
++ +N
Sbjct: 209 ADIGLN 214
>sp|A9MYK3|FIXA_SALPB Protein FixA OS=Salmonella paratyphi B (strain ATCC BAA-1250 /
SPB7) GN=fixA PE=3 SV=1
Length = 256
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 92/186 (49%), Gaps = 13/186 (6%)
Query: 3 INPFDEIAIESAIRLRESSNKIKEIIAISCGNKKC------KEILQIAMAMGVDRAILIE 56
I+ +D AIE+A +L++ +++A+S G K K++L + G D I++
Sbjct: 34 ISQYDLNAIEAACQLKQQLGD-AQVVAMSVGGKALTNAKGRKDVL----SRGPDELIVVI 88
Query: 57 TDTILQSLS--VAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASK 114
D Q+L A L +K L+I G S D Q G ++ LN P SK
Sbjct: 89 DDQFEQALPQHTATALAAAAQKSGFDLLICGDGSSDLYAQQVGLLVGEALNIPAINGVSK 148
Query: 115 IVLKKNNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFKI 174
I+ ++ + V +E+ED ET+ + LPA+I +N P+ ++ I+ A KK + ++
Sbjct: 149 ILSLTDSTLTVERELEDEVETLSIPLPAVIAVSTDINTPQIPSMKAILGAAKKPVQVWSP 208
Query: 175 DELNVN 180
++ +N
Sbjct: 209 ADIGLN 214
>sp|Q8Z9L0|FIXA_SALTI Protein FixA OS=Salmonella typhi GN=fixA PE=3 SV=1
Length = 256
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 92/186 (49%), Gaps = 13/186 (6%)
Query: 3 INPFDEIAIESAIRLRESSNKIKEIIAISCGNKKC------KEILQIAMAMGVDRAILIE 56
I+ +D AIE+A +L++ +++A+S G K K++L + G D I++
Sbjct: 34 ISQYDLNAIEAACQLKQQLGD-AQVVAMSVGGKALTNAKGRKDVL----SRGPDELIVVI 88
Query: 57 TDTILQSLS--VAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASK 114
D Q+L A L +K L+I G S D Q G ++ LN P SK
Sbjct: 89 DDQFEQALPQHTATALAAAAQKSGFDLLICGDGSSDLYAQQVGLLVGEALNIPAINGVSK 148
Query: 115 IVLKKNNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFKI 174
I+ ++ + V +E+ED ET+ + LPA+I +N P+ ++ I+ A KK + ++
Sbjct: 149 ILSLTDSTLTVERELEDEVETLSIPLPAVIAVSTDINTPQIPSMKAILGAAKKPVQVWSP 208
Query: 175 DELNVN 180
++ +N
Sbjct: 209 ADIGLN 214
>sp|B5BL59|FIXA_SALPK Protein FixA OS=Salmonella paratyphi A (strain AKU_12601) GN=fixA
PE=3 SV=1
Length = 256
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 92/186 (49%), Gaps = 13/186 (6%)
Query: 3 INPFDEIAIESAIRLRESSNKIKEIIAISCGNKKC------KEILQIAMAMGVDRAILIE 56
I+ +D AIE+A +L++ +++A+S G K K++L + G D I++
Sbjct: 34 ISQYDLNAIEAACQLKQQLGD-AQVVAMSVGGKALTNAKGRKDVL----SRGPDELIVVI 88
Query: 57 TDTILQSLS--VAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASK 114
D Q+L A L +K L+I G S D Q G ++ LN P SK
Sbjct: 89 DDQFEQALPQHTATALAAAAQKSGFDLLICGDGSSDLYAQQVGLLVGEALNIPAINGVSK 148
Query: 115 IVLKKNNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFKI 174
I+ ++ + V +E+ED ET+ + LPA+I +N P+ ++ I+ A KK + ++
Sbjct: 149 ILSLTDSTLTVERELEDEVETLSIPLPAVIAVSTDINTPQIPSMKAILGAAKKPVQVWSP 208
Query: 175 DELNVN 180
++ +N
Sbjct: 209 ADIGLN 214
>sp|Q5PIN4|FIXA_SALPA Protein FixA OS=Salmonella paratyphi A (strain ATCC 9150 / SARB42)
GN=fixA PE=3 SV=1
Length = 256
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 92/186 (49%), Gaps = 13/186 (6%)
Query: 3 INPFDEIAIESAIRLRESSNKIKEIIAISCGNKKC------KEILQIAMAMGVDRAILIE 56
I+ +D AIE+A +L++ +++A+S G K K++L + G D I++
Sbjct: 34 ISQYDLNAIEAACQLKQQLGD-AQVVAMSVGGKALTNAKGRKDVL----SRGPDELIVVI 88
Query: 57 TDTILQSLS--VAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASK 114
D Q+L A L +K L+I G S D Q G ++ LN P SK
Sbjct: 89 DDQFEQALPQHTATALAAAAQKSGFDLLICGDGSSDLYAQQVGLLVGEALNIPAINGVSK 148
Query: 115 IVLKKNNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFKI 174
I+ ++ + V +E+ED ET+ + LPA+I +N P+ ++ I+ A KK + ++
Sbjct: 149 ILSLTDSTLTVERELEDEVETLSIPLPAVIAVSTDINTPQIPSMKAILGAAKKPVQVWSP 208
Query: 175 DELNVN 180
++ +N
Sbjct: 209 ADIGLN 214
>sp|P59673|FIXA_SHIFL Protein FixA OS=Shigella flexneri GN=fixA PE=3 SV=1
Length = 256
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 90/186 (48%), Gaps = 13/186 (6%)
Query: 3 INPFDEIAIESAIRLRESSNKIKEIIAISCGNKKC------KEILQIAMAMGVDRAILIE 56
I+ +D AIE+A +L++ + + ++ A+S G K K++L + G D I++
Sbjct: 34 ISQYDLNAIEAACQLKQQAAE-AQVTALSVGGKALTNAKGRKDVL----SRGPDELIVVI 88
Query: 57 TDTILQSLSVAKLLQVIVKKENP--QLVILGKQSIDSDNNQTGQMLAALLNWPQATFASK 114
D Q+L + + L++ G S D Q G ++ +LN P SK
Sbjct: 89 DDQFEQALPQQTASALAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAVNGVSK 148
Query: 115 IVLKKNNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFKI 174
I+ + + V +E+ED ET+ + LPA++ +N P+ ++ I+ A KK + ++
Sbjct: 149 IISLTADTLTVERELEDETETLSIPLPAVVAVSTDINSPQIPSMKAILGAAKKPVQVWSA 208
Query: 175 DELNVN 180
++ N
Sbjct: 209 ADIGFN 214
>sp|Q0T8F3|FIXA_SHIF8 Protein FixA OS=Shigella flexneri serotype 5b (strain 8401) GN=fixA
PE=3 SV=1
Length = 256
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 90/186 (48%), Gaps = 13/186 (6%)
Query: 3 INPFDEIAIESAIRLRESSNKIKEIIAISCGNKKC------KEILQIAMAMGVDRAILIE 56
I+ +D AIE+A +L++ + + ++ A+S G K K++L + G D I++
Sbjct: 34 ISQYDLNAIEAACQLKQQAAE-AQVTALSVGGKALTNAKGRKDVL----SRGPDELIVVI 88
Query: 57 TDTILQSLSVAKLLQVIVKKENP--QLVILGKQSIDSDNNQTGQMLAALLNWPQATFASK 114
D Q+L + + L++ G S D Q G ++ +LN P SK
Sbjct: 89 DDQFEQALPQQTASALAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAVNGVSK 148
Query: 115 IVLKKNNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFKI 174
I+ + + V +E+ED ET+ + LPA++ +N P+ ++ I+ A KK + ++
Sbjct: 149 IISLTADTLTVERELEDETETLSIPLPAVVAVSTDINSPQIPSMKAILGAAKKPVQVWSA 208
Query: 175 DELNVN 180
++ N
Sbjct: 209 ADIGFN 214
>sp|B6HYZ2|FIXA_ECOSE Protein FixA OS=Escherichia coli (strain SE11) GN=fixA PE=3 SV=1
Length = 256
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 90/186 (48%), Gaps = 13/186 (6%)
Query: 3 INPFDEIAIESAIRLRESSNKIKEIIAISCGNKKC------KEILQIAMAMGVDRAILIE 56
I+ +D AIE+A +L++ + + ++ A+S G K K++L + G D I++
Sbjct: 34 ISQYDLNAIEAACQLKQQAAE-AQVTALSVGGKALTNAKGRKDVL----SRGPDELIVVI 88
Query: 57 TDTILQSLSVAKLLQVIVKKENP--QLVILGKQSIDSDNNQTGQMLAALLNWPQATFASK 114
D Q+L + + L++ G S D Q G ++ +LN P SK
Sbjct: 89 DDQFEQALPQQTASALAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAVNGVSK 148
Query: 115 IVLKKNNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFKI 174
I+ + + V +E+ED ET+ + LPA++ +N P+ ++ I+ A KK + ++
Sbjct: 149 IISLTADTLTVERELEDETETLSIPLPAVVAVSTDINSPQIPSMKAILGAAKKPVQVWSA 208
Query: 175 DELNVN 180
++ N
Sbjct: 209 ADIGFN 214
>sp|B7M0D8|FIXA_ECO8A Protein FixA OS=Escherichia coli O8 (strain IAI1) GN=fixA PE=3 SV=1
Length = 256
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 90/186 (48%), Gaps = 13/186 (6%)
Query: 3 INPFDEIAIESAIRLRESSNKIKEIIAISCGNKKC------KEILQIAMAMGVDRAILIE 56
I+ +D AIE+A +L++ + + ++ A+S G K K++L + G D I++
Sbjct: 34 ISQYDLNAIEAACQLKQQAAE-AQVTALSVGGKALTNAKGRKDVL----SRGPDELIVVI 88
Query: 57 TDTILQSLSVAKLLQVIVKKENP--QLVILGKQSIDSDNNQTGQMLAALLNWPQATFASK 114
D Q+L + + L++ G S D Q G ++ +LN P SK
Sbjct: 89 DDQFEQALPQQTASALAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAVNGVSK 148
Query: 115 IVLKKNNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFKI 174
I+ + + V +E+ED ET+ + LPA++ +N P+ ++ I+ A KK + ++
Sbjct: 149 IISLTADTLTVERELEDETETLSIPLPAVVAVSTDINSPQIPSMKAILGAAKKPVQVWSA 208
Query: 175 DELNVN 180
++ N
Sbjct: 209 ADIGFN 214
>sp|B7L4G4|FIXA_ECO55 Protein FixA OS=Escherichia coli (strain 55989 / EAEC) GN=fixA PE=3
SV=1
Length = 256
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 90/186 (48%), Gaps = 13/186 (6%)
Query: 3 INPFDEIAIESAIRLRESSNKIKEIIAISCGNKKC------KEILQIAMAMGVDRAILIE 56
I+ +D AIE+A +L++ + + ++ A+S G K K++L + G D I++
Sbjct: 34 ISQYDLNAIEAACQLKQQAAE-AQVTALSVGGKALTNAKGRKDVL----SRGPDELIVVI 88
Query: 57 TDTILQSLSVAKLLQVIVKKENP--QLVILGKQSIDSDNNQTGQMLAALLNWPQATFASK 114
D Q+L + + L++ G S D Q G ++ +LN P SK
Sbjct: 89 DDQFEQALPQQTASALAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAVNGVSK 148
Query: 115 IVLKKNNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFKI 174
I+ + + V +E+ED ET+ + LPA++ +N P+ ++ I+ A KK + ++
Sbjct: 149 IISLTADTLTVERELEDETETLSIPLPAVVAVSTDINSPQIPSMKAILGAAKKPVQVWSA 208
Query: 175 DELNVN 180
++ N
Sbjct: 209 ADIGFN 214
>sp|P60566|FIXA_ECOLI Protein FixA OS=Escherichia coli (strain K12) GN=fixA PE=3 SV=1
Length = 256
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 90/186 (48%), Gaps = 13/186 (6%)
Query: 3 INPFDEIAIESAIRLRESSNKIKEIIAISCGNKKC------KEILQIAMAMGVDRAILIE 56
I+ +D AIE+A +L++ + + ++ A+S G K K++L + G D I++
Sbjct: 34 ISQYDLNAIEAACQLKQQAAE-AQVTALSVGGKALTNAKGRKDVL----SRGPDELIVVI 88
Query: 57 TDTILQSLSVAKLLQVIVKKE--NPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASK 114
D Q+L + + L++ G S D Q G ++ +LN P SK
Sbjct: 89 DDQFEQALPQQTASALAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAVNGVSK 148
Query: 115 IVLKKNNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFKI 174
I+ + + V +E+ED ET+ + LPA++ +N P+ ++ I+ A KK + ++
Sbjct: 149 IISLTADTLTVERELEDETETLSIPLPAVVAVSTDINSPQIPSMKAILGAAKKPVQVWSA 208
Query: 175 DELNVN 180
++ N
Sbjct: 209 ADIGFN 214
>sp|B1IRD5|FIXA_ECOLC Protein FixA OS=Escherichia coli (strain ATCC 8739 / DSM 1576 /
Crooks) GN=fixA PE=3 SV=1
Length = 256
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 90/186 (48%), Gaps = 13/186 (6%)
Query: 3 INPFDEIAIESAIRLRESSNKIKEIIAISCGNKKC------KEILQIAMAMGVDRAILIE 56
I+ +D AIE+A +L++ + + ++ A+S G K K++L + G D I++
Sbjct: 34 ISQYDLNAIEAACQLKQQAAE-AQVTALSVGGKALTNAKGRKDVL----SRGPDELIVVI 88
Query: 57 TDTILQSLSVAKLLQVIVKKE--NPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASK 114
D Q+L + + L++ G S D Q G ++ +LN P SK
Sbjct: 89 DDQFEQALPQQTASALAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAVNGVSK 148
Query: 115 IVLKKNNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFKI 174
I+ + + V +E+ED ET+ + LPA++ +N P+ ++ I+ A KK + ++
Sbjct: 149 IISLTADTLTVERELEDETETLSIPLPAVVAVSTDINSPQIPSMKAILGAAKKPVQVWSA 208
Query: 175 DELNVN 180
++ N
Sbjct: 209 ADIGFN 214
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.351
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,115,918
Number of Sequences: 539616
Number of extensions: 2599300
Number of successful extensions: 9955
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 9793
Number of HSP's gapped (non-prelim): 135
length of query: 219
length of database: 191,569,459
effective HSP length: 113
effective length of query: 106
effective length of database: 130,592,851
effective search space: 13842842206
effective search space used: 13842842206
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)