Query psy9408
Match_columns 219
No_of_seqs 185 out of 1420
Neff 7.3
Searched_HMMs 29240
Date Fri Aug 16 18:25:49 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9408.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9408hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1efv_B Electron transfer flavo 100.0 2.1E-54 7.1E-59 370.3 25.9 215 1-217 36-254 (255)
2 1efp_B ETF, protein (electron 100.0 4.2E-54 1.4E-58 368.0 26.1 216 1-219 33-252 (252)
3 1o97_C Electron transferring f 100.0 1.7E-51 5.9E-56 353.9 23.8 214 1-216 33-262 (264)
4 3ih5_A Electron transfer flavo 100.0 3.4E-30 1.1E-34 215.6 13.3 177 2-191 16-210 (217)
5 1o97_D Electron transferring f 100.0 6.7E-29 2.3E-33 218.5 14.3 158 2-175 13-177 (320)
6 1efv_A Electron transfer flavo 99.9 6.1E-27 2.1E-31 205.6 13.6 153 2-174 14-172 (315)
7 1efp_A ETF, protein (electron 99.9 2.3E-25 7.8E-30 195.0 11.6 164 2-193 12-182 (307)
8 3fet_A Electron transfer flavo 99.9 1E-23 3.5E-28 169.5 12.9 137 25-190 27-165 (166)
9 3hgm_A Universal stress protei 96.8 0.024 8.3E-07 41.9 11.7 98 4-109 12-145 (147)
10 3dlo_A Universal stress protei 96.3 0.09 3.1E-06 39.9 12.2 100 4-109 35-152 (155)
11 2z08_A Universal stress protei 96.2 0.048 1.6E-06 40.0 10.1 98 4-109 12-134 (137)
12 3s3t_A Nucleotide-binding prot 96.2 0.046 1.6E-06 40.3 10.1 98 4-109 15-143 (146)
13 3fg9_A Protein of universal st 95.9 0.073 2.5E-06 39.9 9.9 99 4-109 27-153 (156)
14 3idf_A USP-like protein; unive 95.8 0.11 3.7E-06 38.0 10.4 96 4-109 11-135 (138)
15 3tnj_A Universal stress protei 95.7 0.097 3.3E-06 38.8 10.0 97 4-109 16-143 (150)
16 3fdx_A Putative filament prote 95.7 0.11 3.9E-06 38.0 10.1 93 7-109 16-140 (143)
17 1mjh_A Protein (ATP-binding do 95.1 0.33 1.1E-05 36.3 11.2 98 4-109 15-155 (162)
18 1tq8_A Hypothetical protein RV 95.0 0.45 1.5E-05 36.2 11.8 97 4-109 27-154 (163)
19 3loq_A Universal stress protei 95.0 0.28 9.6E-06 40.7 11.4 98 4-109 180-286 (294)
20 1jmv_A USPA, universal stress 94.9 0.1 3.6E-06 38.2 7.7 95 4-108 12-133 (141)
21 2dum_A Hypothetical protein PH 94.9 0.27 9.1E-06 37.3 10.2 98 4-109 15-152 (170)
22 3mt0_A Uncharacterized protein 94.5 0.27 9.4E-06 40.7 10.1 98 5-109 18-124 (290)
23 1q77_A Hypothetical protein AQ 93.1 0.48 1.6E-05 34.4 8.1 92 4-109 14-135 (138)
24 3olq_A Universal stress protei 92.5 1.1 3.7E-05 37.4 10.5 97 5-109 18-146 (319)
25 3mt0_A Uncharacterized protein 92.4 0.78 2.7E-05 37.9 9.4 94 7-109 154-272 (290)
26 2gm3_A Unknown protein; AT3G01 92.2 1.6 5.6E-05 32.9 10.5 98 6-109 26-159 (175)
27 3rg8_A Phosphoribosylaminoimid 92.1 1.6 5.6E-05 33.9 10.1 78 27-109 4-85 (159)
28 3cis_A Uncharacterized protein 91.6 2.7 9.2E-05 34.9 11.9 96 4-109 181-302 (309)
29 2ixd_A LMBE-related protein; h 91.2 1.3 4.5E-05 36.5 9.4 50 38-87 55-106 (242)
30 3ab8_A Putative uncharacterize 90.6 2.4 8.3E-05 34.2 10.5 96 4-109 164-265 (268)
31 4grd_A N5-CAIR mutase, phospho 90.2 3.1 0.00011 32.8 10.1 79 25-109 12-94 (173)
32 1uan_A Hypothetical protein TT 89.8 1.6 5.3E-05 35.6 8.6 50 38-87 53-104 (227)
33 4b4k_A N5-carboxyaminoimidazol 89.7 2.5 8.4E-05 33.6 9.2 78 26-109 23-104 (181)
34 3ab8_A Putative uncharacterize 89.6 3.4 0.00012 33.3 10.6 96 4-109 10-145 (268)
35 3cis_A Uncharacterized protein 87.1 4.6 0.00016 33.4 10.0 96 4-109 29-157 (309)
36 3trh_A Phosphoribosylaminoimid 86.8 6.4 0.00022 30.8 9.8 77 27-109 8-88 (169)
37 3olq_A Universal stress protei 86.6 3.5 0.00012 34.1 9.0 81 6-93 175-281 (319)
38 3lp6_A Phosphoribosylaminoimid 85.4 10 0.00035 29.8 10.3 77 27-109 9-89 (174)
39 3loq_A Universal stress protei 84.6 0.9 3.1E-05 37.5 4.3 97 4-109 32-158 (294)
40 1q74_A 1D-MYO-inosityl 2-aceta 84.4 4.3 0.00015 34.4 8.6 48 38-85 70-136 (303)
41 1u11_A PURE (N5-carboxyaminoim 84.2 8.7 0.0003 30.4 9.6 77 27-109 23-103 (182)
42 1o4v_A Phosphoribosylaminoimid 84.2 8.2 0.00028 30.6 9.4 78 26-109 14-95 (183)
43 3ors_A N5-carboxyaminoimidazol 84.0 7.6 0.00026 30.2 9.0 76 28-109 6-85 (163)
44 3oow_A Phosphoribosylaminoimid 83.5 9.6 0.00033 29.7 9.4 78 26-109 6-87 (166)
45 2xdq_B Light-independent proto 82.4 6.7 0.00023 35.7 9.5 33 69-110 363-395 (511)
46 2h31_A Multifunctional protein 82.3 11 0.00039 33.7 10.7 78 26-109 266-348 (425)
47 1xmp_A PURE, phosphoribosylami 82.1 8.8 0.0003 30.1 8.7 77 27-109 13-93 (170)
48 3vot_A L-amino acid ligase, BL 81.6 7.1 0.00024 34.1 9.1 44 61-108 58-101 (425)
49 3u7q_B Nitrogenase molybdenum- 81.3 5 0.00017 36.8 8.2 36 69-109 429-467 (523)
50 3kuu_A Phosphoribosylaminoimid 81.2 12 0.00042 29.4 9.3 77 27-109 14-94 (174)
51 4fzr_A SSFS6; structural genom 80.7 17 0.00059 30.8 11.2 38 69-112 114-151 (398)
52 3rsc_A CALG2; TDP, enediyne, s 80.1 9.9 0.00034 32.4 9.4 89 10-112 37-147 (415)
53 3ble_A Citramalate synthase fr 78.7 24 0.00083 30.2 11.4 64 37-103 171-235 (337)
54 3tsa_A SPNG, NDP-rhamnosyltran 77.6 11 0.00037 31.9 8.8 40 67-112 103-142 (391)
55 3ia7_A CALG4; glycosysltransfe 75.7 16 0.00056 30.6 9.4 90 9-112 20-131 (402)
56 2ywx_A Phosphoribosylaminoimid 75.7 23 0.00079 27.3 9.2 73 28-109 2-78 (157)
57 4fs3_A Enoyl-[acyl-carrier-pro 75.2 16 0.00056 29.5 8.9 70 11-84 22-92 (256)
58 2iya_A OLEI, oleandomycin glyc 74.6 19 0.00066 30.8 9.7 88 10-112 29-137 (424)
59 3aek_B Light-independent proto 73.7 12 0.0004 34.3 8.4 32 69-109 340-371 (525)
60 1rqb_A Transcarboxylase 5S sub 72.9 27 0.00092 32.2 10.5 94 10-106 145-246 (539)
61 3kbq_A Protein TA0487; structu 72.7 31 0.0011 26.7 10.5 82 25-111 4-95 (172)
62 3pk0_A Short-chain dehydrogena 71.6 22 0.00074 28.6 8.9 73 11-87 24-97 (262)
63 3rih_A Short chain dehydrogena 71.3 24 0.00082 29.2 9.2 73 11-87 55-128 (293)
64 2iyf_A OLED, oleandomycin glyc 70.7 31 0.0011 29.4 10.1 88 10-112 24-132 (430)
65 2cw6_A Hydroxymethylglutaryl-C 70.5 46 0.0016 27.7 11.1 63 37-102 158-221 (298)
66 3o38_A Short chain dehydrogena 69.7 31 0.001 27.6 9.3 73 11-87 37-110 (266)
67 4fn4_A Short chain dehydrogena 67.8 33 0.0011 28.1 9.2 71 11-86 21-92 (254)
68 1nvm_A HOA, 4-hydroxy-2-oxoval 66.2 42 0.0014 28.7 9.9 52 37-88 151-202 (345)
69 3dff_A Teicoplanin pseudoaglyc 65.7 29 0.00098 28.7 8.5 23 64-86 134-156 (273)
70 2nx9_A Oxaloacetate decarboxyl 65.7 64 0.0022 29.0 11.3 90 9-103 127-223 (464)
71 3u7q_A Nitrogenase molybdenum- 64.4 29 0.001 31.4 8.9 32 69-109 408-439 (492)
72 2xed_A Putative maleate isomer 63.8 61 0.0021 26.7 11.1 86 25-113 147-241 (273)
73 3p9x_A Phosphoribosylglycinami 62.7 47 0.0016 26.6 9.0 75 7-86 15-89 (211)
74 1mkz_A Molybdenum cofactor bio 62.6 50 0.0017 25.2 9.6 81 25-108 11-99 (172)
75 1mio_B Nitrogenase molybdenum 62.5 54 0.0019 29.1 10.2 81 9-109 323-407 (458)
76 3ixl_A Amdase, arylmalonate de 62.0 61 0.0021 26.1 12.2 86 25-113 118-213 (240)
77 3qvl_A Putative hydantoin race 61.8 25 0.00085 28.7 7.2 83 25-112 110-204 (245)
78 3lf2_A Short chain oxidoreduct 61.1 56 0.0019 26.1 9.4 72 11-86 22-95 (265)
79 1qgu_B Protein (nitrogenase mo 60.6 51 0.0017 30.0 9.8 32 69-109 425-463 (519)
80 1mio_A Nitrogenase molybdenum 60.0 50 0.0017 30.2 9.6 32 69-109 447-478 (533)
81 2x5e_A UPF0271 protein PA4511; 59.8 7.1 0.00024 32.5 3.5 48 62-112 126-173 (252)
82 3dfi_A Pseudoaglycone deacetyl 59.7 35 0.0012 28.1 7.9 23 64-86 131-153 (270)
83 1xu9_A Corticosteroid 11-beta- 59.6 56 0.0019 26.4 9.2 71 11-85 42-113 (286)
84 2ji4_A Phosphoribosyl pyrophos 59.4 8.5 0.00029 33.8 4.2 70 37-109 137-218 (379)
85 3dah_A Ribose-phosphate pyroph 59.3 9.5 0.00033 32.8 4.4 68 39-109 116-193 (319)
86 1xw8_A UPF0271 protein YBGL; N 59.0 11 0.00039 31.3 4.6 60 46-112 95-159 (252)
87 1jlj_A Gephyrin; globular alph 58.9 62 0.0021 25.2 10.0 78 25-105 15-105 (189)
88 3okp_A GDP-mannose-dependent a 58.7 75 0.0026 26.1 11.1 80 24-109 34-114 (394)
89 3svt_A Short-chain type dehydr 58.4 66 0.0022 25.9 9.4 73 11-87 25-100 (281)
90 3op1_A Macrolide-efflux protei 58.3 41 0.0014 28.6 8.2 75 8-87 37-131 (308)
91 3pdi_A Nitrogenase MOFE cofact 58.2 31 0.001 31.1 7.8 32 69-109 392-423 (483)
92 3tqr_A Phosphoribosylglycinami 57.3 72 0.0025 25.5 9.2 75 6-86 17-91 (215)
93 3qel_B Glutamate [NMDA] recept 57.2 15 0.00053 31.3 5.4 87 26-113 6-98 (364)
94 4dry_A 3-oxoacyl-[acyl-carrier 56.9 45 0.0015 27.2 8.1 73 11-87 47-120 (281)
95 3oti_A CALG3; calicheamicin, T 56.6 11 0.00037 32.1 4.3 40 67-112 119-158 (398)
96 2dgd_A 223AA long hypothetical 56.5 70 0.0024 25.1 11.6 84 25-112 109-203 (223)
97 3o26_A Salutaridine reductase; 56.2 60 0.002 26.1 8.8 74 10-87 25-100 (311)
98 1iv0_A Hypothetical protein; r 56.0 19 0.00066 25.2 4.9 46 62-108 35-88 (98)
99 1v6t_A Hypothetical UPF0271 pr 55.8 13 0.00044 31.0 4.4 60 46-112 100-164 (255)
100 4dad_A Putative pilus assembly 55.7 46 0.0016 23.3 7.2 66 6-78 78-143 (146)
101 2dfa_A Hypothetical UPF0271 pr 55.2 12 0.00042 31.1 4.2 44 63-112 121-164 (250)
102 2is8_A Molybdopterin biosynthe 55.2 57 0.0019 24.6 7.9 78 26-106 3-90 (164)
103 3jzd_A Iron-containing alcohol 55.0 36 0.0012 29.4 7.4 104 63-171 74-182 (358)
104 3pdi_B Nitrogenase MOFE cofact 54.7 71 0.0024 28.4 9.6 71 28-109 316-397 (458)
105 4ds3_A Phosphoribosylglycinami 54.5 55 0.0019 26.1 8.0 60 25-86 35-94 (209)
106 3ucx_A Short chain dehydrogena 54.3 81 0.0028 25.1 9.3 71 11-86 25-96 (264)
107 1f0k_A MURG, UDP-N-acetylgluco 53.8 90 0.0031 25.5 10.3 91 9-110 22-124 (364)
108 2q5c_A NTRC family transcripti 53.1 38 0.0013 26.5 6.7 28 73-109 137-164 (196)
109 3i1j_A Oxidoreductase, short c 52.8 75 0.0026 24.7 8.6 74 11-87 28-103 (247)
110 3sju_A Keto reductase; short-c 52.5 81 0.0028 25.4 9.0 71 11-86 38-109 (279)
111 3m3h_A OPRT, oprtase, orotate 52.5 16 0.00056 29.8 4.6 41 65-109 73-115 (234)
112 1di6_A MOGA, molybdenum cofact 52.4 83 0.0028 24.7 10.3 75 26-105 5-93 (195)
113 3il6_A 3-oxoacyl-[acyl-carrier 52.4 33 0.0011 28.8 6.7 61 46-108 38-103 (321)
114 3s5j_B Ribose-phosphate pyroph 52.1 9.7 0.00033 32.9 3.2 68 39-109 111-190 (326)
115 3h7a_A Short chain dehydrogena 51.9 87 0.003 24.8 9.0 72 11-87 21-92 (252)
116 2pbq_A Molybdenum cofactor bio 51.7 79 0.0027 24.2 9.9 78 25-106 6-96 (178)
117 4g81_D Putative hexonate dehyd 51.3 46 0.0016 27.2 7.2 71 11-86 23-94 (255)
118 2yjn_A ERYCIII, glycosyltransf 51.3 18 0.00062 31.3 5.0 37 70-112 136-172 (441)
119 3nyw_A Putative oxidoreductase 51.3 51 0.0017 26.2 7.4 73 11-87 21-96 (250)
120 3tfo_A Putative 3-oxoacyl-(acy 51.1 86 0.0029 25.2 8.9 72 11-87 18-90 (264)
121 3gaf_A 7-alpha-hydroxysteroid 50.4 93 0.0032 24.7 9.1 72 11-87 26-98 (256)
122 3iup_A Putative NADPH:quinone 50.2 29 0.001 29.7 6.1 59 14-84 188-246 (379)
123 3pi7_A NADH oxidoreductase; gr 50.1 31 0.0011 29.0 6.2 18 67-84 222-239 (349)
124 3ouz_A Biotin carboxylase; str 50.1 69 0.0024 27.8 8.7 71 8-86 16-86 (446)
125 3hl0_A Maleylacetate reductase 50.1 41 0.0014 28.9 7.0 103 63-171 72-180 (353)
126 2x0k_A Riboflavin biosynthesis 50.0 31 0.0011 29.7 6.1 76 8-87 32-125 (338)
127 1xhl_A Short-chain dehydrogena 49.9 85 0.0029 25.6 8.8 72 11-86 40-114 (297)
128 2p6p_A Glycosyl transferase; X 49.9 22 0.00076 29.8 5.2 38 69-112 98-135 (384)
129 3dez_A OPRT, oprtase, orotate 49.4 21 0.00072 29.3 4.8 69 37-109 38-127 (243)
130 3f1l_A Uncharacterized oxidore 49.3 60 0.0021 25.7 7.6 74 11-87 26-101 (252)
131 1xg5_A ARPG836; short chain de 49.0 1E+02 0.0034 24.6 9.9 72 11-86 46-119 (279)
132 3otg_A CALG1; calicheamicin, T 49.0 22 0.00074 30.1 5.0 40 68-113 120-159 (412)
133 3ewb_X 2-isopropylmalate synth 48.9 1.2E+02 0.004 25.3 10.9 70 37-107 152-224 (293)
134 3h4t_A Glycosyltransferase GTF 48.8 51 0.0017 28.1 7.5 89 10-109 17-120 (404)
135 3gve_A YFKN protein; alpha-bet 48.7 18 0.00062 31.0 4.4 49 38-88 197-251 (341)
136 4imr_A 3-oxoacyl-(acyl-carrier 48.6 1E+02 0.0036 24.7 9.3 71 11-86 47-117 (275)
137 3v2h_A D-beta-hydroxybutyrate 48.6 91 0.0031 25.2 8.7 72 11-86 39-112 (281)
138 3lrt_A Ribose-phosphate pyroph 48.3 14 0.00049 31.1 3.6 68 37-109 104-180 (286)
139 3av3_A Phosphoribosylglycinami 48.2 65 0.0022 25.5 7.5 60 25-86 31-90 (212)
140 3cf4_G Acetyl-COA decarboxylas 48.2 10 0.00034 29.1 2.5 46 68-113 25-70 (170)
141 3v8b_A Putative dehydrogenase, 48.0 90 0.0031 25.3 8.6 72 11-87 42-114 (283)
142 3ijr_A Oxidoreductase, short c 47.8 1.1E+02 0.0038 24.8 9.6 70 11-85 61-132 (291)
143 3iwp_A Copper homeostasis prot 47.6 1.1E+02 0.0039 25.7 9.1 80 1-88 103-189 (287)
144 3s21_A 3-oxoacyl-[ACP] synthas 47.6 41 0.0014 28.4 6.6 62 45-107 52-118 (345)
145 1y5e_A Molybdenum cofactor bio 47.6 89 0.003 23.6 8.9 78 25-105 14-99 (169)
146 3gwa_A 3-oxoacyl-(acyl-carrier 47.5 61 0.0021 27.7 7.7 61 46-107 65-130 (365)
147 2pju_A Propionate catabolism o 47.5 97 0.0033 24.9 8.5 69 25-109 107-176 (225)
148 1xkq_A Short-chain reductase f 47.4 96 0.0033 24.8 8.6 72 11-86 20-94 (280)
149 1ulz_A Pyruvate carboxylase N- 47.2 69 0.0024 27.8 8.2 74 2-87 7-82 (451)
150 2z1n_A Dehydrogenase; reductas 47.2 1E+02 0.0035 24.3 8.8 71 11-86 21-93 (260)
151 3qlj_A Short chain dehydrogena 46.8 1.2E+02 0.0041 24.9 9.7 72 11-87 41-123 (322)
152 2ae2_A Protein (tropinone redu 46.7 1.1E+02 0.0036 24.2 9.0 72 11-87 23-96 (260)
153 3h78_A PQS biosynthetic enzyme 46.6 56 0.0019 28.0 7.3 61 46-107 59-124 (359)
154 3i4f_A 3-oxoacyl-[acyl-carrier 46.5 85 0.0029 24.7 8.1 73 11-87 21-94 (264)
155 4fc7_A Peroxisomal 2,4-dienoyl 46.5 79 0.0027 25.4 8.0 71 11-86 41-113 (277)
156 1vl2_A Argininosuccinate synth 46.2 40 0.0014 30.1 6.4 73 14-89 31-131 (421)
157 3eul_A Possible nitrate/nitrit 46.1 56 0.0019 23.1 6.3 64 7-77 73-136 (152)
158 4e7p_A Response regulator; DNA 46.0 47 0.0016 23.5 5.9 64 7-77 78-141 (150)
159 2qt7_A Receptor-type tyrosine- 45.9 22 0.00077 24.8 3.7 40 78-118 3-43 (91)
160 3il3_A 3-oxoacyl-[acyl-carrier 45.8 65 0.0022 27.0 7.5 61 46-107 43-108 (323)
161 3ftp_A 3-oxoacyl-[acyl-carrier 45.7 97 0.0033 24.9 8.4 71 11-86 42-113 (270)
162 3rxy_A NIF3 protein; structura 45.6 17 0.00059 30.6 3.7 72 28-108 198-272 (278)
163 2b4q_A Rhamnolipids biosynthes 45.4 60 0.002 26.3 7.0 70 11-86 43-113 (276)
164 4eg0_A D-alanine--D-alanine li 45.3 62 0.0021 26.6 7.3 71 28-109 16-95 (317)
165 3kto_A Response regulator rece 45.3 73 0.0025 21.9 7.6 63 8-77 65-127 (136)
166 1vhx_A Putative holliday junct 45.2 7.4 0.00025 29.6 1.2 44 66-109 43-94 (150)
167 3lyh_A Cobalamin (vitamin B12) 45.1 64 0.0022 22.9 6.5 74 10-84 24-100 (126)
168 4f06_A Extracellular ligand-bi 45.0 21 0.00071 30.1 4.2 55 55-112 49-103 (371)
169 3r1i_A Short-chain type dehydr 44.9 1.2E+02 0.0041 24.4 9.5 71 12-87 47-118 (276)
170 4efi_A 3-oxoacyl-(acyl-carrier 44.6 57 0.002 27.7 7.1 61 46-107 51-116 (354)
171 3tjr_A Short chain dehydrogena 44.5 1.3E+02 0.0044 24.5 9.5 73 10-87 44-117 (301)
172 3da8_A Probable 5'-phosphoribo 44.5 68 0.0023 25.7 7.0 59 25-86 39-97 (215)
173 3qiv_A Short-chain dehydrogena 44.5 1.1E+02 0.0038 23.8 8.7 72 11-87 23-95 (253)
174 3jv7_A ADH-A; dehydrogenase, n 44.0 66 0.0022 26.8 7.3 58 15-84 188-245 (345)
175 2vpq_A Acetyl-COA carboxylase; 43.9 69 0.0024 27.8 7.6 68 8-87 11-82 (451)
176 2w70_A Biotin carboxylase; lig 43.9 58 0.002 28.3 7.1 93 2-109 7-103 (449)
177 3imf_A Short chain dehydrogena 43.6 1E+02 0.0035 24.3 8.2 71 11-86 20-91 (257)
178 4hwg_A UDP-N-acetylglucosamine 43.6 25 0.00085 30.5 4.6 78 26-109 37-121 (385)
179 4amg_A Snogd; transferase, pol 43.5 35 0.0012 28.6 5.5 36 70-111 120-155 (400)
180 1meo_A Phosophoribosylglycinam 43.3 1.2E+02 0.0041 23.9 9.0 61 24-86 27-87 (209)
181 3oig_A Enoyl-[acyl-carrier-pro 43.0 1.2E+02 0.0041 23.9 9.2 71 11-86 23-95 (266)
182 3ioy_A Short-chain dehydrogena 42.8 93 0.0032 25.7 8.0 74 10-87 21-96 (319)
183 1qb7_A APRT, adenine phosphori 42.4 35 0.0012 27.6 5.0 43 63-109 54-98 (236)
184 3iwt_A 178AA long hypothetical 42.3 1.1E+02 0.0037 23.1 9.5 64 25-90 16-94 (178)
185 3qek_A NMDA glutamate receptor 42.3 31 0.0011 29.0 5.0 60 52-112 39-101 (384)
186 3eod_A Protein HNR; response r 42.1 41 0.0014 23.0 4.9 63 7-76 63-126 (130)
187 1pl8_A Human sorbitol dehydrog 41.9 1.2E+02 0.004 25.4 8.6 16 41-56 188-203 (356)
188 3rmj_A 2-isopropylmalate synth 41.9 92 0.0032 27.0 8.0 71 37-108 159-232 (370)
189 1ozh_A ALS, acetolactate synth 41.9 23 0.00078 32.3 4.3 52 62-114 193-244 (566)
190 3auf_A Glycinamide ribonucleot 41.9 81 0.0028 25.4 7.2 60 25-86 50-109 (229)
191 2rhc_B Actinorhodin polyketide 41.5 1.3E+02 0.0046 24.0 9.4 71 11-86 36-107 (277)
192 2pjk_A 178AA long hypothetical 41.5 1.2E+02 0.004 23.3 9.5 78 25-105 16-108 (178)
193 1nu0_A Hypothetical protein YQ 41.4 39 0.0013 25.1 4.8 43 67-109 42-92 (138)
194 2wns_A Orotate phosphoribosylt 41.0 38 0.0013 26.6 4.9 41 65-109 47-89 (205)
195 3cnb_A DNA-binding response re 40.9 78 0.0027 21.6 6.3 65 7-77 66-131 (143)
196 3lua_A Response regulator rece 40.7 67 0.0023 22.2 5.9 64 7-77 63-128 (140)
197 3kht_A Response regulator; PSI 40.7 77 0.0026 21.9 6.3 64 7-77 63-129 (144)
198 3aek_A Light-independent proto 40.7 1.5E+02 0.0053 25.9 9.4 31 70-109 369-399 (437)
199 1vdm_A Purine phosphoribosyltr 40.5 45 0.0016 24.4 5.1 42 64-109 12-53 (153)
200 3uhj_A Probable glycerol dehyd 40.5 44 0.0015 29.1 5.7 104 64-171 92-201 (387)
201 3ip1_A Alcohol dehydrogenase, 40.4 45 0.0015 28.8 5.8 17 40-56 229-245 (404)
202 4dfe_A 3-oxoacyl-[acyl-carrier 40.3 99 0.0034 25.8 7.8 61 46-107 50-115 (333)
203 2lpm_A Two-component response 40.0 32 0.0011 24.8 4.0 36 73-109 48-83 (123)
204 3uf6_A LMO1369 protein; struct 39.9 89 0.0031 26.2 7.4 72 4-88 25-96 (291)
205 3cxt_A Dehydrogenase with diff 39.9 1.5E+02 0.0051 24.0 8.9 71 11-86 48-119 (291)
206 3hdg_A Uncharacterized protein 39.9 48 0.0016 22.8 5.0 64 7-77 63-126 (137)
207 1vj0_A Alcohol dehydrogenase, 39.7 94 0.0032 26.4 7.7 6 78-83 267-272 (380)
208 1ydo_A HMG-COA lyase; TIM-barr 39.7 1.7E+02 0.0057 24.5 10.3 67 37-106 159-227 (307)
209 4ewp_A 3-oxoacyl-[acyl-carrier 39.7 89 0.003 26.2 7.5 62 47-109 48-114 (350)
210 3jte_A Response regulator rece 39.6 84 0.0029 21.7 6.3 64 7-77 61-124 (143)
211 1ae1_A Tropinone reductase-I; 39.6 1.4E+02 0.0049 23.7 9.3 72 11-87 35-108 (273)
212 1geg_A Acetoin reductase; SDR 39.4 1.4E+02 0.0047 23.5 9.3 71 11-86 16-87 (256)
213 1zud_1 Adenylyltransferase THI 39.4 84 0.0029 25.3 7.0 83 25-110 29-148 (251)
214 3lyl_A 3-oxoacyl-(acyl-carrier 39.4 1.3E+02 0.0045 23.3 9.3 72 11-87 19-91 (247)
215 4egf_A L-xylulose reductase; s 39.2 94 0.0032 24.8 7.3 71 11-86 34-106 (266)
216 2zat_A Dehydrogenase/reductase 39.0 1.4E+02 0.0048 23.4 9.1 71 11-86 28-99 (260)
217 3t7c_A Carveol dehydrogenase; 38.9 1.6E+02 0.0053 23.9 9.4 71 11-86 42-125 (299)
218 3uog_A Alcohol dehydrogenase; 38.9 63 0.0021 27.3 6.4 11 203-213 342-352 (363)
219 1iow_A DD-ligase, DDLB, D-ALA\ 38.8 56 0.0019 26.4 5.9 61 38-109 24-84 (306)
220 3iv7_A Alcohol dehydrogenase I 38.8 97 0.0033 26.7 7.6 103 63-171 73-181 (364)
221 2jah_A Clavulanic acid dehydro 38.8 1.4E+02 0.0048 23.4 9.1 71 11-86 21-92 (247)
222 3b2n_A Uncharacterized protein 38.1 76 0.0026 21.7 5.8 61 8-75 62-122 (133)
223 4ibo_A Gluconate dehydrogenase 38.0 96 0.0033 24.9 7.2 71 11-86 40-111 (271)
224 3l77_A Short-chain alcohol deh 37.9 83 0.0028 24.3 6.6 72 11-87 16-89 (235)
225 3h5l_A Putative branched-chain 37.9 91 0.0031 26.3 7.3 57 53-112 58-114 (419)
226 3oec_A Carveol dehydrogenase ( 37.8 1.7E+02 0.0058 24.0 9.4 71 11-86 60-143 (317)
227 3pgx_A Carveol dehydrogenase; 37.7 1.5E+02 0.0053 23.6 9.2 72 11-87 29-114 (280)
228 1jkx_A GART;, phosphoribosylgl 37.7 1.5E+02 0.0051 23.4 8.9 60 25-86 28-87 (212)
229 3rkr_A Short chain oxidoreduct 37.7 1.5E+02 0.0051 23.4 9.1 72 11-87 43-115 (262)
230 3okp_A GDP-mannose-dependent a 37.7 1.6E+02 0.0054 24.0 8.7 89 9-110 215-308 (394)
231 3tov_A Glycosyl transferase fa 37.3 1.8E+02 0.0063 24.3 9.4 25 78-110 261-285 (349)
232 1ydn_A Hydroxymethylglutaryl-C 37.2 1.7E+02 0.0059 24.0 11.4 53 37-89 157-210 (295)
233 3gdg_A Probable NADP-dependent 37.1 1E+02 0.0035 24.3 7.1 72 11-87 36-110 (267)
234 3rui_A Ubiquitin-like modifier 36.6 1.1E+02 0.0037 26.3 7.5 84 25-111 35-170 (340)
235 1uuy_A CNX1, molybdopterin bio 36.5 66 0.0023 24.3 5.6 79 25-106 6-99 (167)
236 4da9_A Short-chain dehydrogena 36.3 1.5E+02 0.005 23.9 8.1 71 11-86 43-115 (280)
237 1psw_A ADP-heptose LPS heptosy 36.1 1.6E+02 0.0056 24.0 8.5 25 78-110 261-285 (348)
238 3afn_B Carbonyl reductase; alp 36.1 1.5E+02 0.0051 22.9 10.5 72 11-87 21-94 (258)
239 3mvn_A UDP-N-acetylmuramate:L- 36.0 1.3E+02 0.0045 22.3 9.4 92 4-104 46-161 (163)
240 3v2g_A 3-oxoacyl-[acyl-carrier 35.8 1.7E+02 0.0057 23.4 9.2 71 11-86 45-117 (271)
241 1iy8_A Levodione reductase; ox 35.8 1.6E+02 0.0055 23.2 8.6 71 11-86 27-100 (267)
242 1w6u_A 2,4-dienoyl-COA reducta 35.5 1.6E+02 0.0054 23.6 8.2 71 11-86 40-112 (302)
243 1y0b_A Xanthine phosphoribosyl 35.5 38 0.0013 26.2 4.1 41 65-109 40-80 (197)
244 4dmm_A 3-oxoacyl-[acyl-carrier 35.4 1.7E+02 0.0058 23.3 9.0 71 11-86 42-114 (269)
245 3oid_A Enoyl-[acyl-carrier-pro 35.2 1.7E+02 0.0057 23.2 8.5 71 11-86 18-90 (258)
246 4gnr_A ABC transporter substra 35.1 56 0.0019 26.8 5.3 60 51-113 48-107 (353)
247 3kcn_A Adenylate cyclase homol 35.1 1.1E+02 0.0039 21.3 6.5 63 7-76 60-123 (151)
248 1q6z_A BFD, BFDC, benzoylforma 35.1 32 0.0011 30.9 4.0 48 62-111 186-235 (528)
249 3q9s_A DNA-binding response re 34.9 1.6E+02 0.0056 23.0 8.6 65 6-78 92-156 (249)
250 2qr3_A Two-component system re 34.9 77 0.0026 21.7 5.4 63 7-76 64-126 (140)
251 3eeg_A 2-isopropylmalate synth 34.9 87 0.003 26.6 6.6 68 38-106 154-224 (325)
252 2ywr_A Phosphoribosylglycinami 34.4 1.2E+02 0.0041 24.0 7.0 59 26-86 30-88 (216)
253 2csu_A 457AA long hypothetical 34.2 93 0.0032 27.6 6.9 64 24-87 293-377 (457)
254 2r25_B Osmosensing histidine p 33.6 1.1E+02 0.0039 20.9 6.6 62 8-75 65-126 (133)
255 1dbw_A Transcriptional regulat 33.4 1.1E+02 0.0037 20.5 6.1 61 8-75 60-120 (126)
256 4hti_A Receptor-type tyrosine- 33.4 60 0.0021 23.0 4.4 41 77-118 9-50 (99)
257 3hdv_A Response regulator; PSI 33.4 89 0.003 21.3 5.5 64 7-76 64-127 (136)
258 2uvd_A 3-oxoacyl-(acyl-carrier 33.3 1.7E+02 0.0058 22.7 9.1 71 11-86 18-90 (246)
259 1gu7_A Enoyl-[acyl-carrier-pro 33.0 60 0.0021 27.3 5.3 10 204-213 343-352 (364)
260 3snr_A Extracellular ligand-bi 33.0 93 0.0032 25.2 6.4 72 40-114 26-102 (362)
261 3f6p_A Transcriptional regulat 32.9 1.1E+02 0.0038 20.4 7.8 61 7-75 58-118 (120)
262 1zem_A Xylitol dehydrogenase; 32.9 1.8E+02 0.0061 22.9 9.2 71 11-86 21-92 (262)
263 3f6c_A Positive transcription 32.8 40 0.0014 23.1 3.5 64 7-77 58-121 (134)
264 2pd6_A Estradiol 17-beta-dehyd 32.8 1.1E+02 0.0038 23.9 6.6 72 11-86 21-100 (264)
265 2y1e_A 1-deoxy-D-xylulose 5-ph 32.8 2.6E+02 0.0088 24.7 10.5 91 9-106 36-130 (398)
266 3qw4_B UMP synthase; N-termina 32.8 44 0.0015 29.9 4.5 69 37-109 259-343 (453)
267 1yb1_A 17-beta-hydroxysteroid 32.8 1.8E+02 0.0063 23.0 9.4 72 11-87 45-117 (272)
268 4e6p_A Probable sorbitol dehyd 32.7 1.8E+02 0.0062 22.8 8.5 69 11-87 22-91 (259)
269 2ftp_A Hydroxymethylglutaryl-C 32.6 2.1E+02 0.0072 23.6 10.3 54 37-90 161-215 (302)
270 3sg0_A Extracellular ligand-bi 32.6 1E+02 0.0035 25.3 6.6 70 40-112 46-120 (386)
271 4iin_A 3-ketoacyl-acyl carrier 32.4 1.9E+02 0.0064 22.9 9.2 72 11-87 43-116 (271)
272 1psw_A ADP-heptose LPS heptosy 32.4 1.1E+02 0.0039 24.9 6.9 89 9-108 16-104 (348)
273 4dim_A Phosphoribosylglycinami 32.2 1.5E+02 0.0051 25.0 7.8 49 49-107 49-97 (403)
274 3osu_A 3-oxoacyl-[acyl-carrier 32.1 1.8E+02 0.0061 22.6 9.2 71 11-86 18-90 (246)
275 3chv_A Prokaryotic domain of u 32.1 52 0.0018 27.6 4.6 51 36-87 35-89 (284)
276 1dz3_A Stage 0 sporulation pro 31.9 1.2E+02 0.004 20.5 6.1 63 9-77 62-124 (130)
277 3gqv_A Enoyl reductase; medium 31.9 86 0.0029 26.6 6.1 11 43-53 203-213 (371)
278 3awd_A GOX2181, putative polyo 31.9 1.8E+02 0.0061 22.5 9.1 71 11-86 27-98 (260)
279 3vmm_A Alanine-anticapsin liga 31.9 45 0.0015 29.8 4.4 55 49-107 73-127 (474)
280 1h2b_A Alcohol dehydrogenase; 31.8 67 0.0023 27.1 5.4 13 202-214 336-348 (359)
281 3sx2_A Putative 3-ketoacyl-(ac 31.7 1.9E+02 0.0066 22.8 9.0 72 11-87 27-111 (278)
282 3two_A Mannitol dehydrogenase; 31.6 47 0.0016 27.8 4.4 48 24-83 177-225 (348)
283 3a28_C L-2.3-butanediol dehydr 31.6 1.9E+02 0.0064 22.7 9.7 71 11-86 16-89 (258)
284 3hzh_A Chemotaxis response reg 31.5 48 0.0016 23.7 3.9 61 7-74 95-155 (157)
285 1k92_A Argininosuccinate synth 31.4 2.7E+02 0.0093 24.8 9.5 65 24-88 34-131 (455)
286 3saj_A Glutamate receptor 1; r 31.2 58 0.002 27.3 4.9 71 37-111 24-97 (384)
287 1g2q_A Adenine phosphoribosylt 31.2 55 0.0019 25.1 4.4 42 64-109 41-86 (187)
288 3tsc_A Putative oxidoreductase 31.2 2E+02 0.0068 22.8 9.4 72 11-87 25-110 (277)
289 3vdp_A Recombination protein R 31.0 48 0.0016 26.8 4.0 69 3-78 100-178 (212)
290 2qxy_A Response regulator; reg 31.0 1.3E+02 0.0044 20.6 6.9 64 7-77 59-122 (142)
291 3bg3_A Pyruvate carboxylase, m 30.9 3.5E+02 0.012 25.6 10.6 64 37-103 263-327 (718)
292 1p5d_X PMM, phosphomannomutase 30.9 1.7E+02 0.006 25.7 8.2 45 61-110 258-303 (463)
293 1hp1_A 5'-nucleotidase; metall 30.9 27 0.00093 31.4 2.8 52 38-89 172-230 (516)
294 3gms_A Putative NADPH:quinone 30.9 50 0.0017 27.5 4.4 16 40-56 161-176 (340)
295 3is3_A 17BETA-hydroxysteroid d 30.7 2E+02 0.0068 22.8 9.2 71 11-86 32-104 (270)
296 3td9_A Branched chain amino ac 30.6 83 0.0028 25.9 5.7 52 59-113 62-113 (366)
297 2dzd_A Pyruvate carboxylase; b 30.6 81 0.0028 27.5 5.9 70 9-86 17-87 (461)
298 1vl8_A Gluconate 5-dehydrogena 30.6 2E+02 0.0069 22.8 8.7 71 11-86 35-107 (267)
299 3gmi_A UPF0348 protein MJ0951; 30.4 72 0.0025 27.7 5.3 65 38-107 103-167 (357)
300 3edm_A Short chain dehydrogena 30.3 2E+02 0.0068 22.6 7.9 71 11-86 22-94 (259)
301 3cfy_A Putative LUXO repressor 30.3 1.3E+02 0.0046 20.6 6.4 61 8-75 61-121 (137)
302 4eye_A Probable oxidoreductase 30.2 65 0.0022 26.9 5.0 13 202-214 319-331 (342)
303 2qq5_A DHRS1, dehydrogenase/re 30.2 2E+02 0.0068 22.5 9.3 71 11-86 19-91 (260)
304 3tox_A Short chain dehydrogena 30.2 1.1E+02 0.0037 24.8 6.3 72 11-87 22-94 (280)
305 2dy0_A APRT, adenine phosphori 29.9 44 0.0015 25.7 3.6 41 65-109 50-90 (190)
306 1kor_A Argininosuccinate synth 29.9 95 0.0033 27.2 6.1 71 17-89 20-118 (400)
307 1fmc_A 7 alpha-hydroxysteroid 29.8 1.9E+02 0.0065 22.2 9.0 72 11-87 25-97 (255)
308 4dyv_A Short-chain dehydrogena 29.8 1.9E+02 0.0064 23.2 7.7 69 11-87 42-111 (272)
309 2a9o_A Response regulator; ess 29.8 75 0.0026 20.9 4.5 6 79-84 46-51 (120)
310 1e3j_A NADP(H)-dependent ketos 29.8 1.3E+02 0.0046 24.9 7.0 11 203-213 326-336 (352)
311 2nz2_A Argininosuccinate synth 29.5 81 0.0028 27.8 5.6 67 24-90 29-123 (413)
312 3euo_A Type III pentaketide sy 29.4 1.1E+02 0.0038 26.2 6.5 43 66-109 85-132 (379)
313 3u5t_A 3-oxoacyl-[acyl-carrier 29.4 2.1E+02 0.0073 22.7 8.8 71 11-86 41-113 (267)
314 1o57_A PUR operon repressor; p 29.4 47 0.0016 27.8 3.9 41 65-109 117-157 (291)
315 3gvc_A Oxidoreductase, probabl 29.4 2.1E+02 0.0071 23.0 7.9 27 60-86 84-111 (277)
316 3o07_A Pyridoxine biosynthesis 29.3 83 0.0028 26.6 5.3 62 14-77 190-252 (291)
317 3hsy_A Glutamate receptor 2; l 29.2 1.2E+02 0.004 25.4 6.5 45 62-110 45-89 (376)
318 3f6p_A Transcriptional regulat 29.2 38 0.0013 23.0 2.8 13 38-50 36-48 (120)
319 3hv2_A Response regulator/HD d 29.1 1.1E+02 0.0039 21.4 5.7 63 7-76 70-133 (153)
320 1mxh_A Pteridine reductase 2; 29.1 2.1E+02 0.0072 22.5 8.3 72 11-87 25-103 (276)
321 3pxx_A Carveol dehydrogenase; 29.0 2.1E+02 0.0073 22.6 9.3 72 11-87 24-108 (287)
322 2fyw_A Conserved hypothetical 29.0 54 0.0019 27.0 4.2 65 28-104 180-245 (267)
323 1zuh_A Shikimate kinase; alpha 29.0 22 0.00075 26.2 1.6 28 80-109 9-36 (168)
324 3krt_A Crotonyl COA reductase; 28.9 1.1E+02 0.0036 26.8 6.3 36 14-55 245-280 (456)
325 3i45_A Twin-arginine transloca 28.9 1.4E+02 0.0049 24.6 7.0 50 59-111 54-103 (387)
326 2x9g_A PTR1, pteridine reducta 28.8 2.2E+02 0.0076 22.7 9.9 71 11-86 37-114 (288)
327 2pn1_A Carbamoylphosphate synt 28.7 83 0.0028 25.8 5.4 36 49-87 46-81 (331)
328 1geq_A Tryptophan synthase alp 28.7 1.2E+02 0.0041 23.9 6.2 66 10-84 68-139 (248)
329 1jbe_A Chemotaxis protein CHEY 28.4 1.3E+02 0.0044 20.1 5.6 62 9-76 63-125 (128)
330 1xq1_A Putative tropinone redu 28.3 2.1E+02 0.0072 22.3 9.1 71 11-86 28-100 (266)
331 3sm9_A Mglur3, metabotropic gl 28.2 1.8E+02 0.0061 25.5 7.8 102 2-107 164-269 (479)
332 4gkb_A 3-oxoacyl-[acyl-carrier 28.2 2.4E+02 0.008 22.8 9.1 69 12-86 22-91 (258)
333 2nly_A BH1492 protein, diverge 28.2 91 0.0031 25.5 5.3 38 69-111 119-156 (245)
334 3tpc_A Short chain alcohol deh 28.2 2E+02 0.0068 22.5 7.5 69 11-87 21-90 (257)
335 1gee_A Glucose 1-dehydrogenase 28.1 2.1E+02 0.0072 22.2 8.7 71 11-86 21-93 (261)
336 1b93_A Protein (methylglyoxal 27.9 80 0.0027 24.0 4.6 95 8-115 24-123 (152)
337 2h1v_A Ferrochelatase; rossman 27.5 1.3E+02 0.0046 25.1 6.5 54 4-57 194-256 (310)
338 4e3z_A Putative oxidoreductase 27.3 2.3E+02 0.0078 22.3 9.6 72 11-87 40-113 (272)
339 3jyn_A Quinone oxidoreductase; 27.2 72 0.0024 26.4 4.7 13 202-214 302-314 (325)
340 3o21_A Glutamate receptor 3; p 27.1 1E+02 0.0035 26.0 5.8 54 53-110 45-98 (389)
341 4eyg_A Twin-arginine transloca 27.0 98 0.0033 25.3 5.5 49 60-111 54-102 (368)
342 1hgx_A HGXPRTASE, hypoxanthine 26.9 97 0.0033 23.5 5.1 44 64-111 21-67 (183)
343 2cfc_A 2-(R)-hydroxypropyl-COM 26.9 2.1E+02 0.0073 21.9 7.7 71 11-86 16-88 (250)
344 3vue_A GBSS-I, granule-bound s 26.9 3.2E+02 0.011 24.5 9.3 88 9-111 344-431 (536)
345 3qwb_A Probable quinone oxidor 26.9 96 0.0033 25.6 5.5 16 40-56 165-180 (334)
346 3gl9_A Response regulator; bet 26.8 1.1E+02 0.0038 20.6 5.0 62 7-74 58-120 (122)
347 2iyv_A Shikimate kinase, SK; t 26.8 30 0.001 25.8 2.0 29 79-109 3-31 (184)
348 3uko_A Alcohol dehydrogenase c 26.7 53 0.0018 27.9 3.9 17 40-56 209-225 (378)
349 3lp8_A Phosphoribosylamine-gly 26.7 64 0.0022 28.3 4.5 81 26-109 21-111 (442)
350 1e3i_A Alcohol dehydrogenase, 26.7 84 0.0029 26.6 5.1 17 40-56 211-227 (376)
351 2pl1_A Transcriptional regulat 26.5 1.4E+02 0.0048 19.6 5.9 61 9-76 58-118 (121)
352 2ph3_A 3-oxoacyl-[acyl carrier 26.5 2.2E+02 0.0074 21.8 8.6 72 11-86 15-88 (245)
353 3n0w_A ABC branched chain amin 26.4 89 0.0031 25.9 5.2 49 60-111 55-103 (379)
354 1vlj_A NADH-dependent butanol 26.4 96 0.0033 26.9 5.5 59 41-104 64-124 (407)
355 2vbi_A Pyruvate decarboxylase; 26.3 53 0.0018 29.8 3.9 46 69-114 201-246 (566)
356 2wvg_A PDC, pyruvate decarboxy 26.3 48 0.0017 30.1 3.7 45 70-114 202-246 (568)
357 2zay_A Response regulator rece 26.2 1.1E+02 0.0037 21.1 5.0 63 8-77 65-129 (147)
358 2o23_A HADH2 protein; HSD17B10 26.2 2.3E+02 0.0078 22.0 9.5 68 11-86 26-94 (265)
359 4gsl_A Ubiquitin-like modifier 26.1 2.1E+02 0.0071 26.8 7.9 84 25-111 327-462 (615)
360 2vk8_A Pyruvate decarboxylase 26.1 41 0.0014 30.5 3.1 46 69-114 203-248 (563)
361 4e1l_A Acetoacetyl-COA thiolas 25.9 1.6E+02 0.0055 25.2 6.9 44 65-108 32-80 (395)
362 1qkk_A DCTD, C4-dicarboxylate 25.9 1.6E+02 0.0055 20.5 5.9 62 8-76 60-121 (155)
363 3trf_A Shikimate kinase, SK; a 25.9 27 0.00093 26.0 1.6 30 78-109 5-34 (185)
364 3ai3_A NADPH-sorbose reductase 25.7 2.4E+02 0.0082 22.0 8.6 72 11-87 21-94 (263)
365 1hxh_A 3BETA/17BETA-hydroxyste 25.6 2.4E+02 0.0082 22.0 7.6 68 11-86 20-88 (253)
366 3n0x_A Possible substrate bind 25.6 1.1E+02 0.0036 25.5 5.5 48 60-110 55-102 (374)
367 4dd5_A Acetyl-COA acetyltransf 25.4 1.7E+02 0.0057 25.2 6.9 43 65-107 34-81 (396)
368 3rwb_A TPLDH, pyridoxal 4-dehy 25.4 2.2E+02 0.0075 22.2 7.2 69 11-87 20-89 (247)
369 2eq5_A 228AA long hypothetical 25.4 75 0.0026 24.8 4.3 34 77-112 173-206 (228)
370 3cz5_A Two-component response 25.4 72 0.0024 22.5 3.9 61 8-75 64-124 (153)
371 1ja9_A 4HNR, 1,3,6,8-tetrahydr 25.4 2.4E+02 0.0082 21.9 8.3 71 11-86 35-107 (274)
372 4fgs_A Probable dehydrogenase 25.3 2.5E+02 0.0085 23.0 7.6 67 12-86 44-111 (273)
373 1a04_A Nitrate/nitrite respons 25.3 2.1E+02 0.0073 21.3 8.4 63 7-76 63-125 (215)
374 4h1s_A 5'-nucleotidase; hydrol 25.3 59 0.002 29.3 4.0 45 38-88 176-220 (530)
375 1hdc_A 3-alpha, 20 beta-hydrox 25.2 1.9E+02 0.0066 22.6 6.8 68 11-86 19-87 (254)
376 2oho_A Glutamate racemase; iso 25.2 1.6E+02 0.0053 24.0 6.3 78 27-110 14-103 (273)
377 2qhx_A Pteridine reductase 1; 25.1 2.8E+02 0.0095 22.8 8.1 71 11-86 60-150 (328)
378 2xdq_A Light-independent proto 25.0 3.2E+02 0.011 23.8 8.8 31 70-109 386-416 (460)
379 1kjq_A GART 2, phosphoribosylg 25.0 2.6E+02 0.0089 23.3 8.0 20 68-87 64-83 (391)
380 2gt1_A Lipopolysaccharide hept 24.9 2.8E+02 0.0094 22.4 9.4 80 9-110 198-277 (326)
381 3uve_A Carveol dehydrogenase ( 24.9 2.6E+02 0.0089 22.2 9.2 73 10-87 24-113 (286)
382 2aee_A OPRT, oprtase, orotate 24.8 89 0.003 24.4 4.6 41 65-109 53-95 (211)
383 3bo9_A Putative nitroalkan dio 24.8 3E+02 0.01 22.9 9.0 18 37-54 91-108 (326)
384 3gk3_A Acetoacetyl-COA reducta 24.7 2.6E+02 0.0088 22.0 9.1 72 11-87 39-112 (269)
385 1e7w_A Pteridine reductase; di 24.6 2.7E+02 0.0093 22.3 8.1 72 11-87 23-114 (291)
386 3e1h_A PKSIIINC, putative unch 24.6 1.5E+02 0.005 26.5 6.5 42 67-109 115-161 (465)
387 3hn7_A UDP-N-acetylmuramate-L- 24.6 2.2E+02 0.0074 25.5 7.7 62 39-105 434-518 (524)
388 3r3s_A Oxidoreductase; structu 24.6 2.8E+02 0.0094 22.3 8.0 72 11-87 63-137 (294)
389 1jq5_A Glycerol dehydrogenase; 24.5 1.5E+02 0.005 25.2 6.3 121 41-167 50-177 (370)
390 2vsy_A XCC0866; transferase, g 24.4 2.7E+02 0.0094 24.3 8.3 87 8-110 391-481 (568)
391 3ivs_A Homocitrate synthase, m 24.4 2.9E+02 0.0098 24.4 8.2 67 38-107 183-250 (423)
392 4a2c_A Galactitol-1-phosphate 24.4 1.6E+02 0.0054 24.2 6.4 13 202-214 323-335 (346)
393 3fpc_A NADP-dependent alcohol 24.3 59 0.002 27.3 3.6 17 40-56 182-198 (352)
394 3o1i_D Periplasmic protein TOR 24.3 1.6E+02 0.0054 23.2 6.2 51 4-56 17-71 (304)
395 3e61_A Putative transcriptiona 24.3 2.5E+02 0.0085 21.7 9.0 76 3-88 19-96 (277)
396 2iht_A Carboxyethylarginine sy 24.2 61 0.0021 29.5 3.9 47 68-114 207-253 (573)
397 3hcw_A Maltose operon transcri 24.2 2.6E+02 0.009 22.0 8.7 78 3-89 23-102 (295)
398 2h1v_A Ferrochelatase; rossman 24.2 1.8E+02 0.0063 24.2 6.7 30 28-57 84-113 (310)
399 2pan_A Glyoxylate carboligase; 24.1 44 0.0015 30.7 3.0 47 68-114 217-263 (616)
400 1vr6_A Phospho-2-dehydro-3-deo 24.1 3.4E+02 0.012 23.3 8.5 79 29-109 192-279 (350)
401 3hcn_A Ferrochelatase, mitocho 24.1 1.3E+02 0.0043 26.1 5.7 30 28-57 97-126 (359)
402 1zk4_A R-specific alcohol dehy 24.0 2.5E+02 0.0084 21.6 7.6 70 11-86 20-90 (251)
403 2nwq_A Probable short-chain de 24.0 1.8E+02 0.006 23.3 6.4 70 11-86 35-105 (272)
404 2j48_A Two-component sensor ki 23.9 1.5E+02 0.0051 19.0 7.1 13 77-89 44-56 (119)
405 3ax6_A Phosphoribosylaminoimid 23.9 1.7E+02 0.0059 24.5 6.6 11 77-87 61-71 (380)
406 3ss6_A Acetyl-COA acetyltransf 23.9 1.6E+02 0.0053 25.3 6.4 45 64-108 31-80 (394)
407 1xhf_A DYE resistance, aerobic 23.8 1.1E+02 0.0037 20.3 4.4 16 77-92 46-61 (123)
408 3fbg_A Putative arginate lyase 23.8 97 0.0033 25.8 4.9 15 41-56 168-182 (346)
409 1x1t_A D(-)-3-hydroxybutyrate 23.8 2.6E+02 0.0089 21.8 8.2 71 11-86 18-91 (260)
410 3r0j_A Possible two component 23.7 2.5E+02 0.0086 21.6 8.7 64 7-77 79-142 (250)
411 3jyf_A 2',3'-cyclic nucleotide 23.7 36 0.0012 29.1 2.2 51 38-88 191-244 (339)
412 2vbf_A Branched-chain alpha-ke 23.7 48 0.0016 30.1 3.1 46 69-114 220-265 (570)
413 3goa_A 3-ketoacyl-COA thiolase 23.7 87 0.003 26.9 4.7 52 64-115 29-87 (387)
414 3beo_A UDP-N-acetylglucosamine 23.7 63 0.0022 26.6 3.7 41 67-110 84-124 (375)
415 3k31_A Enoyl-(acyl-carrier-pro 23.7 2.9E+02 0.0098 22.2 9.2 69 12-87 47-117 (296)
416 3tzq_B Short-chain type dehydr 23.7 2.7E+02 0.0093 22.0 9.2 68 12-87 26-94 (271)
417 1jw9_B Molybdopterin biosynthe 23.6 1.6E+02 0.0055 23.5 6.1 84 25-111 32-152 (249)
418 3h5n_A MCCB protein; ubiquitin 23.6 2.4E+02 0.0082 23.9 7.4 85 25-111 119-240 (353)
419 2qf7_A Pyruvate carboxylase pr 23.5 1.5E+02 0.0051 29.8 6.8 92 8-109 24-122 (1165)
420 1p2f_A Response regulator; DRR 23.5 2.3E+02 0.008 21.1 8.8 64 8-78 56-119 (220)
421 2hq1_A Glucose/ribitol dehydro 23.4 2.5E+02 0.0085 21.4 9.2 71 11-86 19-91 (247)
422 2nxw_A Phenyl-3-pyruvate decar 23.4 48 0.0016 30.1 3.1 46 69-114 214-259 (565)
423 1cdo_A Alcohol dehydrogenase; 23.4 1.1E+02 0.0039 25.7 5.3 17 40-56 208-224 (374)
424 2wya_A Hydroxymethylglutaryl-C 23.4 61 0.0021 28.8 3.7 51 67-117 59-114 (460)
425 3crn_A Response regulator rece 23.4 1.8E+02 0.006 19.7 5.8 60 9-75 61-120 (132)
426 3va7_A KLLA0E08119P; carboxyla 23.4 1.8E+02 0.006 29.6 7.3 71 9-87 42-112 (1236)
427 1lbq_A Ferrochelatase; rossman 23.4 1.4E+02 0.0049 25.7 6.0 53 4-57 215-275 (362)
428 1ovm_A Indole-3-pyruvate decar 23.3 63 0.0021 29.1 3.8 46 69-114 201-246 (552)
429 3tdn_A FLR symmetric alpha-bet 23.3 56 0.0019 26.0 3.2 27 77-105 100-126 (247)
430 3i09_A Periplasmic branched-ch 23.3 87 0.003 25.9 4.5 50 59-111 52-101 (375)
431 4h2g_A 5'-nucleotidase; dimer, 23.2 56 0.0019 29.7 3.5 46 38-89 198-243 (546)
432 1zn8_A APRT, adenine phosphori 23.2 61 0.0021 24.5 3.2 41 65-109 41-84 (180)
433 3gt7_A Sensor protein; structu 23.2 1.6E+02 0.0055 20.7 5.5 65 7-77 63-128 (154)
434 4feg_A Pyruvate oxidase; carba 23.2 73 0.0025 29.2 4.3 50 62-114 198-247 (603)
435 1hnj_A Beta-ketoacyl-acyl carr 23.0 2.6E+02 0.009 22.6 7.5 61 46-107 36-101 (317)
436 3l6e_A Oxidoreductase, short-c 23.0 2.6E+02 0.009 21.6 8.0 68 11-86 17-85 (235)
437 4dup_A Quinone oxidoreductase; 22.8 1.3E+02 0.0045 25.1 5.6 13 202-214 330-342 (353)
438 1zgz_A Torcad operon transcrip 22.8 1.7E+02 0.0058 19.2 6.0 60 9-76 60-119 (122)
439 3r5x_A D-alanine--D-alanine li 22.7 91 0.0031 25.3 4.4 31 78-109 55-85 (307)
440 2c07_A 3-oxoacyl-(acyl-carrier 22.7 2.9E+02 0.0099 21.9 9.1 72 11-87 58-130 (285)
441 1tjn_A Sirohydrochlorin cobalt 22.7 2.3E+02 0.0079 20.9 6.4 44 9-56 42-88 (156)
442 2qv5_A AGR_C_5032P, uncharacte 22.5 1.4E+02 0.0048 24.6 5.5 29 80-111 155-183 (261)
443 2y7e_A 3-keto-5-aminohexanoate 22.4 67 0.0023 26.9 3.5 53 34-87 33-89 (282)
444 3nrc_A Enoyl-[acyl-carrier-pro 22.4 2.9E+02 0.01 21.9 9.0 70 11-87 42-112 (280)
445 1k68_A Phytochrome response re 22.4 1.8E+02 0.0061 19.4 5.5 63 8-76 68-131 (140)
446 2fts_A Gephyrin; gephyrin, neu 22.4 3.9E+02 0.013 23.3 9.1 102 2-108 159-277 (419)
447 3l49_A ABC sugar (ribose) tran 22.2 2.8E+02 0.0095 21.5 11.0 79 3-88 16-96 (291)
448 1h5q_A NADP-dependent mannitol 22.0 2.8E+02 0.0094 21.4 8.2 71 11-86 28-100 (265)
449 3h1g_A Chemotaxis protein CHEY 22.0 1.3E+02 0.0046 20.2 4.7 62 8-75 64-126 (129)
450 2q2v_A Beta-D-hydroxybutyrate 21.9 2.8E+02 0.0097 21.5 8.6 69 11-86 18-87 (255)
451 4eez_A Alcohol dehydrogenase 1 21.9 1.8E+02 0.0061 24.0 6.2 13 202-214 315-327 (348)
452 1p0f_A NADP-dependent alcohol 21.9 87 0.003 26.4 4.3 16 41-56 208-223 (373)
453 3ot5_A UDP-N-acetylglucosamine 21.9 53 0.0018 28.4 2.9 36 69-109 105-142 (403)
454 3c6c_A 3-keto-5-aminohexanoate 21.9 1.1E+02 0.0037 26.1 4.8 51 37-88 50-105 (316)
455 1tmy_A CHEY protein, TMY; chem 21.9 1.7E+02 0.006 19.1 7.3 59 7-72 59-117 (120)
456 2gdz_A NAD+-dependent 15-hydro 21.8 2.9E+02 0.0099 21.6 7.6 73 11-87 21-95 (267)
457 2yzr_A Pyridoxal biosynthesis 21.8 1.4E+02 0.0048 25.6 5.5 64 12-77 230-294 (330)
458 3kty_A Probable methyltransfer 21.8 1.8E+02 0.006 21.9 5.7 32 26-57 10-44 (173)
459 3m6i_A L-arabinitol 4-dehydrog 21.8 2.1E+02 0.0073 23.7 6.7 17 40-56 195-211 (363)
460 3ztv_A NAD nucleotidase, NADN; 21.7 65 0.0022 29.5 3.6 45 38-88 184-228 (579)
461 1jfl_A Aspartate racemase; alp 21.7 1.2E+02 0.0041 23.8 4.9 40 68-111 64-103 (228)
462 1v5e_A Pyruvate oxidase; oxido 21.7 81 0.0028 28.8 4.3 45 68-114 196-240 (590)
463 1g5c_A Beta-carbonic anhydrase 21.6 2.6E+02 0.009 21.0 8.0 70 25-94 25-95 (170)
464 1uls_A Putative 3-oxoacyl-acyl 21.6 2.7E+02 0.0093 21.6 7.0 65 11-86 19-85 (245)
465 3r0v_A Alpha/beta hydrolase fo 21.6 1.5E+02 0.005 22.2 5.2 57 42-103 43-107 (262)
466 2wj6_A 1H-3-hydroxy-4-oxoquina 21.6 1.2E+02 0.0042 23.9 4.9 57 43-104 48-114 (276)
467 1wma_A Carbonyl reductase [NAD 21.5 2.8E+02 0.0096 21.3 8.2 72 11-86 18-90 (276)
468 4dqx_A Probable oxidoreductase 21.4 3.1E+02 0.011 21.8 8.3 68 12-87 42-110 (277)
469 2wfl_A Polyneuridine-aldehyde 21.4 1.1E+02 0.0037 23.8 4.5 73 26-103 11-99 (264)
470 2q28_A Oxalyl-COA decarboxylas 21.4 44 0.0015 30.2 2.4 52 62-114 197-248 (564)
471 3tjm_A Fatty acid synthase; th 21.3 1.9E+02 0.0065 22.9 6.1 51 50-104 49-104 (283)
472 1nmo_A Hypothetical protein YB 21.2 86 0.0029 25.4 3.9 69 28-107 168-237 (247)
473 1iir_A Glycosyltransferase GTF 21.2 94 0.0032 26.4 4.4 88 10-111 17-123 (415)
474 1v4v_A UDP-N-acetylglucosamine 21.1 96 0.0033 25.6 4.3 93 10-110 21-120 (376)
475 4dvj_A Putative zinc-dependent 21.1 82 0.0028 26.6 3.9 11 203-213 336-346 (363)
476 1l1q_A Adenine phosphoribosylt 21.1 85 0.0029 24.0 3.7 38 68-109 43-80 (186)
477 1xkl_A SABP2, salicylic acid-b 21.1 1E+02 0.0035 24.2 4.3 59 40-103 23-93 (273)
478 2d8a_A PH0655, probable L-thre 21.0 97 0.0033 25.8 4.4 17 40-56 183-199 (348)
479 1y0e_A Putative N-acetylmannos 21.0 81 0.0028 24.5 3.6 9 78-86 197-205 (223)
480 3grk_A Enoyl-(acyl-carrier-pro 20.9 3.3E+02 0.011 21.9 8.9 70 12-87 48-118 (293)
481 2c31_A Oxalyl-COA decarboxylas 20.9 44 0.0015 30.3 2.3 53 61-114 198-250 (568)
482 3dlo_A Universal stress protei 20.9 2.4E+02 0.0081 20.2 6.4 49 8-57 77-126 (155)
483 3dzc_A UDP-N-acetylglucosamine 20.8 57 0.0019 28.0 2.9 79 24-109 53-139 (396)
484 3kyj_B CHEY6 protein, putative 20.7 1.8E+02 0.006 20.0 5.2 69 26-103 13-85 (145)
485 2uz1_A Benzaldehyde lyase; thi 20.7 47 0.0016 30.1 2.4 52 62-114 190-241 (563)
486 2a4k_A 3-oxoacyl-[acyl carrier 20.6 2.2E+02 0.0076 22.5 6.4 67 11-86 20-88 (263)
487 3cqy_A Anhydro-N-acetylmuramic 20.6 76 0.0026 27.8 3.6 39 63-104 273-313 (370)
488 3hdg_A Uncharacterized protein 20.6 2E+02 0.0069 19.3 6.5 28 74-101 47-74 (137)
489 1kol_A Formaldehyde dehydrogen 20.5 1.7E+02 0.0059 24.7 5.9 17 40-56 201-217 (398)
490 3n74_A 3-ketoacyl-(acyl-carrie 20.5 3E+02 0.01 21.3 8.4 69 11-87 23-92 (261)
491 4eso_A Putative oxidoreductase 20.4 2.9E+02 0.0099 21.6 7.0 68 11-86 22-90 (255)
492 1sjd_A N-acylamino acid racema 20.4 3.6E+02 0.012 22.6 7.9 95 9-111 144-239 (368)
493 3snk_A Response regulator CHEY 20.4 79 0.0027 21.7 3.2 62 7-75 71-132 (135)
494 2qv7_A Diacylglycerol kinase D 20.4 3.7E+02 0.013 22.2 8.4 55 2-58 30-90 (337)
495 3c6x_A Hydroxynitrilase; atomi 20.3 91 0.0031 24.2 3.8 60 40-104 22-93 (257)
496 1tuo_A Putative phosphomannomu 20.3 3.5E+02 0.012 23.7 8.1 57 49-110 252-310 (464)
497 1zsy_A Mitochondrial 2-enoyl t 20.3 1.6E+02 0.0054 24.6 5.5 17 40-56 184-200 (357)
498 1ybh_A Acetolactate synthase, 20.3 84 0.0029 28.6 4.0 43 69-113 206-248 (590)
499 1w2w_B 5-methylthioribose-1-ph 20.2 1E+02 0.0034 24.2 3.9 62 40-112 22-92 (191)
500 1b73_A Glutamate racemase; iso 20.2 2.6E+02 0.0088 22.3 6.6 37 71-110 55-91 (254)
No 1
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=100.00 E-value=2.1e-54 Score=370.27 Aligned_cols=215 Identities=48% Similarity=0.806 Sum_probs=203.0
Q ss_pred CCCCHhhHHHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEe-cC---CCCCHHHHHHHHHHHHHh
Q psy9408 1 MSINPFDEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIE-TD---TILQSLSVAKLLQVIVKK 76 (219)
Q Consensus 1 ~~iNp~D~~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~-~~---~~~d~~~~A~~la~~ik~ 76 (219)
|+|||+|++|||+|++|+|+ |.+.+|++++||++.+++.+|++++||+|++|+++ ++ .++++++||++|++++++
T Consensus 36 ~~lnp~d~~Ale~A~~Lke~-g~~~~V~av~~G~~~a~~~lr~ala~GaD~vi~v~~d~~~~~~~~~~~~A~~La~~i~~ 114 (255)
T 1efv_B 36 HSMNPFCEIAVEEAVRLKEK-KLVKEVIAVSCGPAQCQETIRTALAMGADRGIHVEVPPAEAERLGPLQVARVLAKLAEK 114 (255)
T ss_dssp EEECHHHHHHHHHHHHHHHT-TSCSEEEEEEEESTTHHHHHHHHHHHTCSEEEEEECCHHHHTTCCHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHhc-CCCceEEEEEeCChhHHHHHHHHHhcCCCEEEEEecChhhcccCCHHHHHHHHHHHHHh
Confidence 47999999999999999997 42229999999998788999999999999999999 76 478999999999999999
Q ss_pred cCCCEEEEcccccCCCcCcHHHHHHHHcCCCcccceeEEEEeeCCeEEEEEEcCCeEEEEEEcCCEEEEEecCCCCCCCC
Q psy9408 77 ENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASKIVLKKNNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYV 156 (219)
Q Consensus 77 ~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~~l~~~~~~~~~~~R~~~gG~~~~~~~~P~vvtv~~~~~~pr~p 156 (219)
.+||+||||+|+.|++++|++|+||++||||++|+|++++++ ++.++++|++|+|.+++++++|+|+|++++.|+||||
T Consensus 115 ~~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~~l~~~-~~~~~v~R~i~gG~~~v~~~~P~VvTv~~~~~~pR~~ 193 (255)
T 1efv_B 115 EKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQVTLE-GDKLKVEREIDGGLETLRLKLPAVVTADLRLNEPRYA 193 (255)
T ss_dssp HTCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEEEEEE-TTEEEEEEEETTEEEEEEEESSEEEEECGGGCCCCCC
T ss_pred cCCCEEEEeCcccCCchhhHHHHHHHHhCCCcccceEEEEEc-CCeEEEEEEcCCcEEEEEECCCEEEEEeCCCCCcCCC
Confidence 999999999999999999999999999999999999999998 8999999999999989999999999999999999999
Q ss_pred CHHHHHHHccCcceEeeccccCCcCCCCeEEEEEeeccCCCCeeEechHHHHHHHHhhcCC
Q psy9408 157 TLMNIIKARKKNINIFKIDELNVNINTGLNIIKVKESHKNNLGIKVKNVIELIDKLKNEAK 217 (219)
Q Consensus 157 ~l~~~~~A~~~~i~~~~~~~l~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~l~~~L~~~~~ 217 (219)
||++||+|+|+||++|+++|||++..|++++.++++|++|+.++++++.++|+++|++++.
T Consensus 194 sl~~im~A~kk~i~~~~~~dl~~~~~~~~~v~~~~~p~~~~~~~~i~~~~~l~~~L~~~~~ 254 (255)
T 1efv_B 194 TLPNIMKAKKKKIEVIKPGDLGVDLTSKLSVISVEDPPQRTAGVKVETTEDLVAKLKEIGR 254 (255)
T ss_dssp CHHHHHHTTTSCEEEECHHHHTCCCCCSEEEEEEECCCCCCCCEECSSHHHHHHHHHHTTC
T ss_pred CHHHHHHhccCCeeEecHHHcCCCCCCCeEEEEEecCCCCcCCEEECCHHHHHHHHHHhcC
Confidence 9999999999999999999999998899999999999998889999988999999998664
No 2
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=100.00 E-value=4.2e-54 Score=367.99 Aligned_cols=216 Identities=50% Similarity=0.780 Sum_probs=198.7
Q ss_pred CCCCHhhHHHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEe-cC---CCCCHHHHHHHHHHHHHh
Q psy9408 1 MSINPFDEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIE-TD---TILQSLSVAKLLQVIVKK 76 (219)
Q Consensus 1 ~~iNp~D~~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~-~~---~~~d~~~~A~~la~~ik~ 76 (219)
++|||||++|||+|++|+|+ |.+.+|++++||++.+++.+|++++||+|++|+++ ++ .++++++||++|++++++
T Consensus 33 ~~lnp~d~~Ale~A~~Lke~-g~~~~V~av~~G~~~a~~~lr~ala~GaD~vi~v~~d~~~~~~~~~~~~a~~La~~i~~ 111 (252)
T 1efp_B 33 MSMNPFDEIAVEEAIRLKEK-GQAEEIIAVSIGVKQAAETLRTALAMGADRAILVVAADDVQQDIEPLAVAKILAAVARA 111 (252)
T ss_dssp EEECHHHHHHHHHHHHHHTT-TSCSEEEEEEEESGGGHHHHHHHHHHTCSEEEEEECCSSTTCCCCHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHhc-CCCceEEEEEeCChhHHHHHHHHHhcCCCEEEEEecChhhcccCCHHHHHHHHHHHHHh
Confidence 46999999999999999997 41229999999998788999999999999999999 76 468999999999999999
Q ss_pred cCCCEEEEcccccCCCcCcHHHHHHHHcCCCcccceeEEEEeeCCeEEEEEEcCCeEEEEEEcCCEEEEEecCCCCCCCC
Q psy9408 77 ENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASKIVLKKNNKILVTQEIEDGKETILLSLPAIITTDLRMNEPRYV 156 (219)
Q Consensus 77 ~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~~l~~~~~~~~~~~R~~~gG~~~~~~~~P~vvtv~~~~~~pr~p 156 (219)
.+||+||||+|+.|++++|++|+||++||||++|+|++++++ ++.++++|++|+|.+++++++|+|+|++++.|+||||
T Consensus 112 ~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~l~~~-~~~~~v~R~i~gG~~~v~~~~P~vvTv~~~~~~pR~~ 190 (252)
T 1efp_B 112 EGTELIIAGKQAIDNDMNATGQMLAAILGWAQATFASKVEIE-GAKAKVTREVDGGLQTIAVSLPAVVTADLRLNEPRYA 190 (252)
T ss_dssp HTCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEEEEEEC-SSEEEEEEEETTEEEEEEEESSEEEEECTTSCCCCCC
T ss_pred cCCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEEEEEEc-CCeEEEEEEcCCcEEEEEECCCEEEEEeCCCCCcCCC
Confidence 999999999999999999999999999999999999999998 8899999999999989999999999999999999999
Q ss_pred CHHHHHHHccCcceEeeccccCCcCCCCeEEEEEeeccCCCCeeEechHHHHHHHHhhcCCCC
Q psy9408 157 TLMNIIKARKKNINIFKIDELNVNINTGLNIIKVKESHKNNLGIKVKNVIELIDKLKNEAKII 219 (219)
Q Consensus 157 ~l~~~~~A~~~~i~~~~~~~l~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~l~~~L~~~~~~~ 219 (219)
||++||+|+||||++|+++|||++..|++++.++++|++|+.++++++.++|+++|+ +.++|
T Consensus 191 sl~~im~A~kk~i~~~~~~dl~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~l~~~L~-~~~~i 252 (252)
T 1efp_B 191 SLPNIMKAKKKPLDEKTAADYGVDVAPRLEVVSVREPEGRKAGIKVGSVDELVGKLK-EAGVI 252 (252)
T ss_dssp CHHHHHHHTTSCEEEEEGGGGTCCCCCSEEEEEEECCCCCCCCEECSSHHHHHTTC-------
T ss_pred CHHHHHhhccCCeeEecHHHcCCCCCCCcEEEEEecCCCCcCcEEECCHHHHHHHHH-HcCCC
Confidence 999999999999999999999998889999999999998888899988899999999 57765
No 3
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=100.00 E-value=1.7e-51 Score=353.94 Aligned_cols=214 Identities=27% Similarity=0.492 Sum_probs=186.0
Q ss_pred CCCCHhhHHHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCC--CCCHHHHHHHHHHHHHhcC
Q psy9408 1 MSINPFDEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDT--ILQSLSVAKLLQVIVKKEN 78 (219)
Q Consensus 1 ~~iNp~D~~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~--~~d~~~~A~~la~~ik~~~ 78 (219)
++|||+|++|||+|++|+|++|.+.+|++++||++.+++.+|++++||+|++|+++++. +++++.||++|++++++.+
T Consensus 33 ~~lnp~d~~ale~A~~Lke~~g~~~~V~av~~G~~~~~~~lr~ala~GaD~vi~v~d~~~~~~~~~~~a~~La~~i~~~~ 112 (264)
T 1o97_C 33 YDLNEWDDFSLEEAMKIKESSDTDVEVVVVSVGPDRVDESLRKCLAKGADRAVRVWDDAAEGSDAIVVGRILTEVIKKEA 112 (264)
T ss_dssp EEECHHHHHHHHHHHHHHHHCSSCCEEEEEEESCGGGHHHHHHHHHTTCSEEEEECCGGGTTCCHHHHHHHHHHHHHHHC
T ss_pred CccCHHHHHHHHHHHHHHHhcCCCceEEEEEeCchhHHHHHHHHHhcCCCEEEEEcCcccccCCHHHHHHHHHHHHHhcC
Confidence 36899999999999999998731129999999997788999999999999999999764 6899999999999999999
Q ss_pred CCEEEEcccccCCCcCcHHHHHHHHcCCCcccceeEEEE--eeCCeEEEEEEcCCe-EEEEEEcCCEEEEEecCCCCCCC
Q psy9408 79 PQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASKIVL--KKNNKILVTQEIEDG-KETILLSLPAIITTDLRMNEPRY 155 (219)
Q Consensus 79 ~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~~l~~--~~~~~~~~~R~~~gG-~~~~~~~~P~vvtv~~~~~~pr~ 155 (219)
||+||||+|+.|++++|++|+||++||||++|+|+++++ + ++.++++|++|+| .+++++++|+|+|++++.|+|||
T Consensus 113 ~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~l~~~~~-~~~~~~~R~i~gG~~~~v~~~~P~vvTv~~~~~~pR~ 191 (264)
T 1o97_C 113 PDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVADLQYKPG-DNKAVIRRELEGGMLQEVEINCPAVLTIQLGINKPRY 191 (264)
T ss_dssp CSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEEEECCTT-CSEEEEEEECGGGCEEEEEEESSCEEEECTTSSCCTT
T ss_pred CCEEEEcCCccCCchhhHHHHHHHHhCCCcccceEEEEEecC-CCeEEEEEEcCCCcEEEEEECCCEEEEEeCCCCCcCC
Confidence 999999999999999999999999999999999999998 6 8889999999999 78888999999999999999999
Q ss_pred CCHHHHHHHccCcceEeeccccCCcC---C---CCeEEEEEeeccCCCCeeEec-----hHHHHHHHHhhcC
Q psy9408 156 VTLMNIIKARKKNINIFKIDELNVNI---N---TGLNIIKVKESHKNNLGIKVK-----NVIELIDKLKNEA 216 (219)
Q Consensus 156 p~l~~~~~A~~~~i~~~~~~~l~~~~---~---~~~~v~~~~~p~~~~~~~~~~-----~~~~l~~~L~~~~ 216 (219)
|||++||+|+|+||++|+++|||+++ + |++++.++++|++++. ++++ .+++|+++|+++.
T Consensus 192 psl~~im~A~kk~i~~~~~~dl~~~~~~~~l~g~~~~v~~~~~p~~~~~-~~~~~~~~e~~~~l~~~L~~~~ 262 (264)
T 1o97_C 192 ASLRGIKQAATKPIEEVSLADIGLSANDVGAAQSMSRVRRMYIPEKGRA-TMIEGTISEQAAKIIQIINEFK 262 (264)
T ss_dssp CC----------CCEEECTGGGTCCGGGSSGGGSSSEEEEEECCCCCCC-EECCSCHHHHHHHHHHHHHHC-
T ss_pred CCHHHHHHhccCCeeEecHHHcCcChhhccccCCCcEEEEEecCCCCcc-EEECCChHHHHHHHHHHHHHhc
Confidence 99999999999999999999998753 3 8899999999988777 7775 3799999998754
No 4
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=99.97 E-value=3.4e-30 Score=215.58 Aligned_cols=177 Identities=15% Similarity=0.218 Sum_probs=144.9
Q ss_pred CCCHhhHHHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCC--CCCHHHHHHHHHHHHHhcCC
Q psy9408 2 SINPFDEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDT--ILQSLSVAKLLQVIVKKENP 79 (219)
Q Consensus 2 ~iNp~D~~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~--~~d~~~~A~~la~~ik~~~~ 79 (219)
.|||.+.++|++|++|++++ |++|++|++|+. +++.++++++||+|++|+++++. .++++.|+++|++++++++|
T Consensus 16 ~l~~~s~ell~~A~~La~~~--g~~v~av~~G~~-~~~~~~~~~~~Gad~v~~v~~~~~~~~~~~~~a~~l~~~i~~~~p 92 (217)
T 3ih5_A 16 IVADVSLELLTKGRSLANEL--NCQLEAVVAGTG-LKEIEKQILPYGVDKLHVFDAEGLYPYTSLPHTSILVNLFKEEQP 92 (217)
T ss_dssp EECHHHHHHHHHHHHHHHHH--TCCEEEEEEESC-CTTTHHHHGGGTCSEEEEEECGGGSSCCHHHHHHHHHHHHHHHCC
T ss_pred EECHHHHHHHHHHHHHHHhc--CCeEEEEEECCC-HHHHHHHHHhcCCCEEEEecCcccccCCHHHHHHHHHHHHHhcCC
Confidence 37899999999999999987 469999999986 67789999999999999999764 78999999999999999999
Q ss_pred CEEEEcccccCCCcCcHHHHHHHHcCCCcccceeEEEEeeCC-----------eEEEEEEcCCeEEEEEE--c--CCEEE
Q psy9408 80 QLVILGKQSIDSDNNQTGQMLAALLNWPQATFASKIVLKKNN-----------KILVTQEIEDGKETILL--S--LPAII 144 (219)
Q Consensus 80 dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~~l~~~~~~-----------~~~~~R~~~gG~~~~~~--~--~P~vv 144 (219)
|+||+|+++.| ++++||||++||+|++++|++++++ ++ .++++|+.|+|+...++ + .|+|+
T Consensus 93 ~~Vl~g~t~~G---~~laprlAa~L~~~~~sdv~~l~~~-~~~~~~~~~~~~~~l~~~Rp~~gG~~~ati~~~~~~p~v~ 168 (217)
T 3ih5_A 93 QICLMGATVIG---RDLGPRVSSALTSGLTADCTSLEIG-DHEDKKEGKVYKNLLYQIRPAFGGNIVATIVNPEHRPQMA 168 (217)
T ss_dssp SEEEEECSHHH---HHHHHHHHHHTTCCCBCSCSEEEEE-EEEETTTTEEEEEEEEEEEESSSSSCEEEECCSSSSSEEE
T ss_pred CEEEEeCCcch---hhHHHHHHHHhCCCccceEEEEEec-CCccccccccccccEEEEEECCCCEEEEEEEecCCCCEEE
Confidence 99999999864 6799999999999999999999987 33 59999999999975444 3 68999
Q ss_pred EEecCCCCCCCCCHHHHHHHccCcceEeeccc-cCCcCCCCeEEEEEe
Q psy9408 145 TTDLRMNEPRYVTLMNIIKARKKNINIFKIDE-LNVNINTGLNIIKVK 191 (219)
Q Consensus 145 tv~~~~~~pr~p~l~~~~~A~~~~i~~~~~~~-l~~~~~~~~~v~~~~ 191 (219)
||+++.|+|..+. ..+..+|+.++.+- +. +....++++++.
T Consensus 169 TVr~~~f~~~~~~-----~~~~~~v~~~~~~~~~~-~~~~~~~v~~~~ 210 (217)
T 3ih5_A 169 TVREGVMKKEIVS-----PAYQGEVIRHDVKKYVA-DTDYVVKVIERH 210 (217)
T ss_dssp EECTTSSCCCCSC-----TTCCCEEEECCHHHHHT-TSCCCCCCC---
T ss_pred EECCCCCCcCcCC-----CCCCccEEEecccccCC-chhcceEEEEEE
Confidence 9999999987554 23456676665531 11 113355665544
No 5
>1o97_D Electron transferring flavoprotein alpha-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 c.31.1.2 PDB: 1o95_D* 1o96_B* 1o94_D* 3clu_D* 3clt_D* 3clr_D* 3cls_D*
Probab=99.96 E-value=6.7e-29 Score=218.52 Aligned_cols=158 Identities=14% Similarity=0.158 Sum_probs=137.3
Q ss_pred CCCHhhHHHHHHHHHhhhhcCCC-cEEEEEEecCcchHHHHHH-HHhCCCCEEEEEecCC-CCCHHHHHHHHHHHHHhcC
Q psy9408 2 SINPFDEIAIESAIRLRESSNKI-KEIIAISCGNKKCKEILQI-AMAMGVDRAILIETDT-ILQSLSVAKLLQVIVKKEN 78 (219)
Q Consensus 2 ~iNp~D~~Ale~A~~l~e~~g~g-~~V~av~~G~~~~~~~lr~-~~a~GaD~v~~v~~~~-~~d~~~~A~~la~~ik~~~ 78 (219)
.+||+|.++|++|++|++ . | .+|+++++|+. ++ .+++ +++||+|++|+++++. +++++.|+++|++++++.+
T Consensus 13 ~l~~~~~eal~~A~~L~e-~--g~~~V~av~~G~~-~~-~~~~~a~a~GaDkv~~v~d~~l~~~~~~~a~~La~~i~~~~ 87 (320)
T 1o97_D 13 DLRPVSLELIGAANGLKK-S--GEDKVVVAVIGSQ-AD-AFVPALSVNGVDELVVVKGSSIDFDPDVFEASVSALIAAHN 87 (320)
T ss_dssp EECTHHHHHHHHHHHHCS-S--TTCEEEEEEESTT-GG-GGHHHHCBTTCSEEEEEECSCSSCCHHHHHHHHHHHHHHHC
T ss_pred CcCHHHHHHHHHHHHHhh-C--CCCcEEEEEECCc-HH-HHHHHHHhcCCceEEEEeCcccCCCHHHHHHHHHHHHHhcC
Confidence 489999999999999998 5 4 49999999987 66 8888 8899999999999765 6799999999999999999
Q ss_pred CCEEEEcccccCCCcCcHHHHHHHHcCCCcccceeEEEEeeCCeEEEEEEcCCeEEE--EEEc-C-CEEEEEecCCCCCC
Q psy9408 79 PQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASKIVLKKNNKILVTQEIEDGKET--ILLS-L-PAIITTDLRMNEPR 154 (219)
Q Consensus 79 ~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~~l~~~~~~~~~~~R~~~gG~~~--~~~~-~-P~vvtv~~~~~~pr 154 (219)
||+||+|+|+. +++++||||++||+|++|+|++++.+ ++.++++|+.|+|+.. ++++ . |+|+||+++.|+|+
T Consensus 88 pdlVL~g~ts~---G~~laprlAa~L~~~~vtdv~~l~~~-~~~l~~~R~~~gG~~~~ti~~~~~~p~viTVr~~~f~~~ 163 (320)
T 1o97_D 88 PSVVLLPHSVD---SLGYASSLASKTGYGFATDVYIVEYQ-GDELVATRGGYNQKVNVEVDFPGKSTVVLTIRPSVFKPL 163 (320)
T ss_dssp CSEEEEECSHH---HHTTHHHHHHTSSCEEEEEECEEEEE-TTEEEEEEEETTTTEEEEEECTTCSCEEEEECTTSSCCC
T ss_pred CCEEEEeCCCc---hhhHHHHHHHHhCCCccccEEEEEec-CCeEEEEEEcCCCEEEEEEEecCCCCEEEEEcCCCCCCC
Confidence 99999999984 57899999999999999999999997 6779999999999864 4443 4 89999999999987
Q ss_pred CCCHHHHHHHccCcceEeecc
Q psy9408 155 YVTLMNIIKARKKNINIFKID 175 (219)
Q Consensus 155 ~p~l~~~~~A~~~~i~~~~~~ 175 (219)
+. .+..+++.++..
T Consensus 164 -~~------~~~~~v~~~~~~ 177 (320)
T 1o97_D 164 -EG------AGSPVVSNVDAP 177 (320)
T ss_dssp -CS------BCCCEEEEEECC
T ss_pred -CC------CCCcceEEeccC
Confidence 42 345567666553
No 6
>1efv_A Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 c.31.1.2 PDB: 2a1u_A* 1t9g_R* 2a1t_R*
Probab=99.94 E-value=6.1e-27 Score=205.63 Aligned_cols=153 Identities=16% Similarity=0.166 Sum_probs=132.2
Q ss_pred CCCHhhHHHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHH-HhCCCCEEEEEecCC--CCCHHHHHHHHHHHHHhcC
Q psy9408 2 SINPFDEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIA-MAMGVDRAILIETDT--ILQSLSVAKLLQVIVKKEN 78 (219)
Q Consensus 2 ~iNp~D~~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~-~a~GaD~v~~v~~~~--~~d~~~~A~~la~~ik~~~ 78 (219)
.+||+|.++|++|++|++ +|+++++|+. +++.++++ ++||+|++|+++++. +++++.|+++|++++++.+
T Consensus 14 ~l~~~~~eal~aA~~La~------~V~av~~G~~-~~~~~~~a~~a~GaDkv~~v~d~~l~~~~~~~~a~~La~li~~~~ 86 (315)
T 1efv_A 14 SLAPITLNTITAATRLGG------EVSCLVAGTK-CDKVAQDLCKVAGIAKVLVAQHDVYKGLLPEELTPLILATQKQFN 86 (315)
T ss_dssp EECTHHHHHHHHHHTTTS------EEEEEEEESC-CHHHHHHHHHSTTCCEEEEEECGGGTTCCHHHHHHHHHHHHHHHC
T ss_pred CcCHHHHHHHHHHHHhcC------cEEEEEECCc-hHHHHHHHHHhcCCCEEEEecCchhccCCHHHHHHHHHHHHHhcC
Confidence 479999999999999962 8999999987 78899999 899999999999764 7899999999999999999
Q ss_pred CCEEEEcccccCCCcCcHHHHHHHHcCCCcccceeEEEEeeCCeEEEEEEcCCeEE--EEEEc-CCEEEEEecCCCCCCC
Q psy9408 79 PQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASKIVLKKNNKILVTQEIEDGKE--TILLS-LPAIITTDLRMNEPRY 155 (219)
Q Consensus 79 ~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~~l~~~~~~~~~~~R~~~gG~~--~~~~~-~P~vvtv~~~~~~pr~ 155 (219)
||+||+|+|+. +++++||||++||+|++|+|++++.+ + +++|+.|+|+. +++++ .|+|+||+++.|+|..
T Consensus 87 pdlVL~g~ts~---G~~laprlAa~L~~~~vtdv~~l~~~-~---~~~R~~~gG~~~~tv~~~~~p~viTVr~~~f~~~~ 159 (315)
T 1efv_A 87 YTHICAGASAF---GKNLLPRVAAKLEVAPISDIIAIKSP-D---TFVRTIYAGNALCTVKCDEKVKVFSVRGTSFDAAA 159 (315)
T ss_dssp CSEEEEESSHH---HHHHHHHHHHHHTCCCEEEECEEEET-T---EEEEEETTTTEEEEEEECCSSEEEEECGGGSCCCC
T ss_pred CCEEEEcCCCC---cchHHHHHHHHhCCCccccEEEeccC-C---EEEEEcCCCEEEEEEEeCCCCeEEEEcCCCCCCCC
Confidence 99999999984 58899999999999999999999987 4 89999999985 55554 5899999999998754
Q ss_pred CCHHHHHHHccCcceEeec
Q psy9408 156 VTLMNIIKARKKNINIFKI 174 (219)
Q Consensus 156 p~l~~~~~A~~~~i~~~~~ 174 (219)
+ ..+..+++.++.
T Consensus 160 ~------~~~~~~v~~~~~ 172 (315)
T 1efv_A 160 T------SGGSASSEKASS 172 (315)
T ss_dssp S------SSCCCEEEECCC
T ss_pred C------CCCCcceEEecc
Confidence 3 134455665544
No 7
>1efp_A ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3 c.31.1.2
Probab=99.92 E-value=2.3e-25 Score=195.00 Aligned_cols=164 Identities=13% Similarity=0.095 Sum_probs=132.4
Q ss_pred CCC-HhhHHHHHHHHHhhhhcCCCcEEEEEEecCcchHHH-HHHHHhCCCCEEEEEecCC--CCCHHHHHHHHHHHHHhc
Q psy9408 2 SIN-PFDEIAIESAIRLRESSNKIKEIIAISCGNKKCKEI-LQIAMAMGVDRAILIETDT--ILQSLSVAKLLQVIVKKE 77 (219)
Q Consensus 2 ~iN-p~D~~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~-lr~~~a~GaD~v~~v~~~~--~~d~~~~A~~la~~ik~~ 77 (219)
.|| |+|.++|++|++| | +|+++++|+. +++. .+++++||+|++|+++++. +++++.|+++|+++ +.
T Consensus 12 ~l~~~~~~eal~aA~~L----g---~V~av~~G~~-~~~~~~~~a~a~GaDkv~~v~d~~l~~~~~~~~a~~La~~--~~ 81 (307)
T 1efp_A 12 ALNRDATAKAVAAVKAL----G---DVTVLCAGAS-AKAAAEEAAKIAGVAKVLVAEDALYGHRLAEPTAALIVGL--AG 81 (307)
T ss_dssp CBCHHHHHHHHHHHGGG----S---CEEEEEEETT-CHHHHHHHHTSTTEEEEEEEECGGGTTCCHHHHHHHHHHH--HT
T ss_pred EeCchhhHHHHHHHHHh----C---CEEEEEECCc-hHHHHHHHHHhcCCCEEEEecCchhccCCHHHHHHHHHHH--cc
Confidence 589 9999999999999 2 7999999987 5555 5688899999999999764 78999999999999 55
Q ss_pred CCCEEEEcccccCCCcCcHHHHHHHHcCCCcccceeEEEEeeCCeEEEEEEcCCeEE--EEEEc-CCEEEEEecCCCCCC
Q psy9408 78 NPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASKIVLKKNNKILVTQEIEDGKE--TILLS-LPAIITTDLRMNEPR 154 (219)
Q Consensus 78 ~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~~l~~~~~~~~~~~R~~~gG~~--~~~~~-~P~vvtv~~~~~~pr 154 (219)
+||+||+|+|+ ++++++||||++||+|++|+|++++.+ + +++|+.|+|+. +++++ .|+|+||+++.|+|.
T Consensus 82 ~pd~VL~g~ts---~G~~laprlAa~L~~~~vtdv~~l~~~-~---~~~R~~~gG~~~~tv~~~~~p~viTVr~~~f~~~ 154 (307)
T 1efp_A 82 DYSHIAAPATT---DAKNVMPRVAALLDVMVLSDVSAILDA-D---TFERPIYAGNAIQVVKSKDAKKVFTIRTASFDAA 154 (307)
T ss_dssp TCSEEEEESSH---HHHHHHHHHHHHTTCCEEEEESEECSS-S---EEEEEEGGGTEEEEEEECSSSEEEEECGGGSCCC
T ss_pred CCCEEEEeCCc---chhhHHHHHHHHhCCCccccEEEEccC-C---EEEEECCCCEEEEEEEeCCCCEEEEEcCCCCCCC
Confidence 89999999998 458899999999999999999999876 4 89999999986 45555 799999999999976
Q ss_pred CCCHHHHHHHccCcceEeeccccCCcCCCCeEEEEEeec
Q psy9408 155 YVTLMNIIKARKKNINIFKIDELNVNINTGLNIIKVKES 193 (219)
Q Consensus 155 ~p~l~~~~~A~~~~i~~~~~~~l~~~~~~~~~v~~~~~p 193 (219)
. ..+..+++.++.. .+ ...+++++....
T Consensus 155 ~-------~~~~~~v~~~~~~---~~-~~~~~~~~~~~~ 182 (307)
T 1efp_A 155 G-------EGGTAPVTETAAA---AD-PGLSSWVADEVA 182 (307)
T ss_dssp C-------SSCCCCCBCCCCC---CC-CCSEEEEEEEEC
T ss_pred C-------CCCCcceEEeccc---cC-cCceEEEEEEec
Confidence 2 2344556544432 11 234665655443
No 8
>3fet_A Electron transfer flavoprotein subunit alpha RELA protein; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: MSE; 2.05A {Thermoplasma acidophilum}
Probab=99.91 E-value=1e-23 Score=169.47 Aligned_cols=137 Identities=14% Similarity=0.129 Sum_probs=113.8
Q ss_pred cEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHc
Q psy9408 25 KEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALL 104 (219)
Q Consensus 25 ~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~L 104 (219)
++|+++++|+..+ + .+|+|++|++++ .. +++.|+++|+++++ +||+||+|+++ ++++++||||++|
T Consensus 27 g~v~av~~G~~~~----~---~~Gad~v~~v~~-~~-~~e~~a~~l~~~~~--~p~~Vl~g~t~---~g~~vaprlAa~L 92 (166)
T 3fet_A 27 GDMDSVIIGEGDA----K---GLGSKVLYRAKK-GT-PFDAVSEGILKIAG--NYDYIAIGSTE---VGREIAGYLSFKT 92 (166)
T ss_dssp EEEEEEEESCCCC----T---TCCCSEEEEECT-TC-CHHHHHHHHHHHHT--TCSEEEEECSH---HHHHHHHHHHHHH
T ss_pred CcEEEEEECcchH----H---HcCCCEEEEeCC-CC-ChHHHHHHHHHHHc--CCCEEEEcCCC---ccccHHHHHHHHh
Confidence 5999999998643 2 239999999994 33 89999999999998 99999999986 4678999999999
Q ss_pred CCCcccceeEEEEeeCCeEEEEEEcCCeEE--EEEEcCCEEEEEecCCCCCCCCCHHHHHHHccCcceEeeccccCCcCC
Q psy9408 105 NWPQATFASKIVLKKNNKILVTQEIEDGKE--TILLSLPAIITTDLRMNEPRYVTLMNIIKARKKNINIFKIDELNVNIN 182 (219)
Q Consensus 105 g~p~vt~v~~l~~~~~~~~~~~R~~~gG~~--~~~~~~P~vvtv~~~~~~pr~p~l~~~~~A~~~~i~~~~~~~l~~~~~ 182 (219)
|+|++++|++++.+ ++.++++|+.|+|+. +++++.| |+|++++.|+++-+ .++.+|+.++++ .
T Consensus 93 ~~~~~sdv~~l~~~-~~~~~~~R~~~gG~~~~tv~~~~p-v~Tvr~~~f~~~~~-------~~~~~v~~~~~~------~ 157 (166)
T 3fet_A 93 GFYTATEIFSLEFN-GQKAHTKRFFYGGKTVIEEESDAR-ILTVAPGVIEAKDL-------GTTPEIRDLEIG------Q 157 (166)
T ss_dssp CCCEEEEEEEEEES-SSSEEEEEEEGGGTEEEEEEECCC-EEEECTTSSCCCCC-------SCCCEEEECCCC------C
T ss_pred CCCceeeEEEEEec-CCEEEEEEEccCCEEEEEEEeCCC-EEEECCCCCCCCCC-------CCCcceEEEccC------C
Confidence 99999999999998 889999999999985 6788899 99999999996532 244566655554 4
Q ss_pred CCeEEEEE
Q psy9408 183 TGLNIIKV 190 (219)
Q Consensus 183 ~~~~v~~~ 190 (219)
++++++++
T Consensus 158 ~~v~~~~~ 165 (166)
T 3fet_A 158 SRIKITKF 165 (166)
T ss_dssp CCCEEEEC
T ss_pred CeEEEEec
Confidence 56776653
No 9
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=96.78 E-value=0.024 Score=41.89 Aligned_cols=98 Identities=18% Similarity=0.256 Sum_probs=67.8
Q ss_pred CHhhHHHHHHHHHhhhhcCCCcEEEEEEecCcch-------------------------HHHH----HHHHhCCCCE---
Q psy9408 4 NPFDEIAIESAIRLRESSNKIKEIIAISCGNKKC-------------------------KEIL----QIAMAMGVDR--- 51 (219)
Q Consensus 4 Np~D~~Ale~A~~l~e~~g~g~~V~av~~G~~~~-------------------------~~~l----r~~~a~GaD~--- 51 (219)
.+....|++.|.+++... +.+++.+.+-+... ++.+ +.+-..|.+-
T Consensus 12 s~~s~~al~~A~~la~~~--~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~ 89 (147)
T 3hgm_A 12 SKGAVKALEKGVGLQQLT--GAELYILCVFKHHSLLEASLSMARPEQLDIPDDALKDYATEIAVQAKTRATELGVPADKV 89 (147)
T ss_dssp BHHHHHHHHHHHHHHHHH--CCEEEEEEEECCHHHHHHTBSSCCCGGGCCCTTHHHHHHHHHHHHHHHHHHHTTCCGGGE
T ss_pred CHHHHHHHHHHHHHHHhc--CCEEEEEEEecCcccccccccccChhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCccce
Confidence 467889999999999986 47898888765321 1222 2334567653
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCC----cCcHHHHHHHHcCCCcc
Q psy9408 52 AILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSD----NNQTGQMLAALLNWPQA 109 (219)
Q Consensus 52 v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~----~~~v~~~lA~~Lg~p~v 109 (219)
-..+..+ ++ +..|.+.+++.++|+|++|....++- -|.++-.+.....+|++
T Consensus 90 ~~~~~~g---~~---~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~~pVl 145 (147)
T 3hgm_A 90 RAFVKGG---RP---SRTIVRFARKRECDLVVIGAQGTNGDKSLLLGSVAQRVAGSAHCPVL 145 (147)
T ss_dssp EEEEEES---CH---HHHHHHHHHHTTCSEEEECSSCTTCCSCCCCCHHHHHHHHHCSSCEE
T ss_pred EEEEecC---CH---HHHHHHHHHHhCCCEEEEeCCCCccccceeeccHHHHHHhhCCCCEE
Confidence 2333322 33 57888899999999999998765442 35678888888888864
No 10
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=96.28 E-value=0.09 Score=39.87 Aligned_cols=100 Identities=10% Similarity=0.013 Sum_probs=68.3
Q ss_pred CHhhHHHHHHHHHhhhhcCCCcEEEEEEecCcc----------hHHHH----HHHHhCCCCEEEEEecCCCCCHHHHHHH
Q psy9408 4 NPFDEIAIESAIRLRESSNKIKEIIAISCGNKK----------CKEIL----QIAMAMGVDRAILIETDTILQSLSVAKL 69 (219)
Q Consensus 4 Np~D~~Ale~A~~l~e~~g~g~~V~av~~G~~~----------~~~~l----r~~~a~GaD~v~~v~~~~~~d~~~~A~~ 69 (219)
.+....||+.|.+++... +.+++++.+-+.. +++.+ +.+-..|.+--+...-. .-++ +..
T Consensus 35 s~~s~~al~~A~~la~~~--~a~l~llhV~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~v~-~G~~---~~~ 108 (155)
T 3dlo_A 35 SDRAERVLRFAAEEARLR--GVPVYVVHSLPGGGRTKDEDIIEAKETLSWAVSIIRKEGAEGEEHLLVR-GKEP---PDD 108 (155)
T ss_dssp SHHHHHHHHHHHHHHHHH--TCCEEEEEEECCSTTSCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEES-SSCH---HHH
T ss_pred CHHHHHHHHHHHHHHHhc--CCEEEEEEEEcCCCcccHHHHHHHHHHHHHHHHHHHhcCCCceEEEEec-CCCH---HHH
Confidence 578899999999999986 4688888885421 22222 33445677643322111 1233 488
Q ss_pred HHHHHHhcCCCEEEEcccccCCC----cCcHHHHHHHHcCCCcc
Q psy9408 70 LQVIVKKENPQLVILGKQSIDSD----NNQTGQMLAALLNWPQA 109 (219)
Q Consensus 70 la~~ik~~~~dlVl~G~~s~d~~----~~~v~~~lA~~Lg~p~v 109 (219)
|.+.+++.++|+|++|....++- -|.++-.+.....+|++
T Consensus 109 I~~~a~~~~~DLIV~G~~g~~~~~~~~lGSv~~~vl~~a~~PVL 152 (155)
T 3dlo_A 109 IVDFADEVDAIAIVIGIRKRSPTGKLIFGSVARDVILKANKPVI 152 (155)
T ss_dssp HHHHHHHTTCSEEEEECCEECTTSCEECCHHHHHHHHHCSSCEE
T ss_pred HHHHHHHcCCCEEEECCCCCCCCCCEEeccHHHHHHHhCCCCEE
Confidence 88999999999999998865542 25678888888888864
No 11
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=96.22 E-value=0.048 Score=40.01 Aligned_cols=98 Identities=18% Similarity=0.179 Sum_probs=64.5
Q ss_pred CHhhHHHHHHHHHhhhhcCCCcEEEEEEecCcc-------------------hHHHHHHHHh-CCC-CEEEEEecCCCCC
Q psy9408 4 NPFDEIAIESAIRLRESSNKIKEIIAISCGNKK-------------------CKEILQIAMA-MGV-DRAILIETDTILQ 62 (219)
Q Consensus 4 Np~D~~Ale~A~~l~e~~g~g~~V~av~~G~~~-------------------~~~~lr~~~a-~Ga-D~v~~v~~~~~~d 62 (219)
++....|++.|.+++... +.+++.+.+-++. +++.++++.. .|. +--+.+.. + +
T Consensus 12 s~~s~~al~~a~~la~~~--~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~--g-~ 86 (137)
T 2z08_A 12 SEHARRAAEVAKAEAEAH--GARLIVVHAYEPVPDYLGEPFFEEALRRRLERAEGVLEEARALTGVPKEDALLLE--G-V 86 (137)
T ss_dssp SHHHHHHHHHHHHHHHHH--TCEEEEEEEECC--------------CHHHHHHHHHHHHHHHHHCCCGGGEEEEE--S-S
T ss_pred CHHHHHHHHHHHHHHhhc--CCEEEEEEEecCCCccccccchHHHHHHHHHHHHHHHHHHHHHcCCCccEEEEEe--c-C
Confidence 467789999999999886 4688887664321 1122333322 465 32122221 1 2
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEcccccCCC----cCcHHHHHHHHcCCCcc
Q psy9408 63 SLSVAKLLQVIVKKENPQLVILGKQSIDSD----NNQTGQMLAALLNWPQA 109 (219)
Q Consensus 63 ~~~~A~~la~~ik~~~~dlVl~G~~s~d~~----~~~v~~~lA~~Lg~p~v 109 (219)
.+..|.+.+++.++|+|++|....++- -|.++-.+.....+|++
T Consensus 87 ---~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~~pVl 134 (137)
T 2z08_A 87 ---PAEAILQAARAEKADLIVMGTRGLGALGSLFLGSQSQRVVAEAPCPVL 134 (137)
T ss_dssp ---HHHHHHHHHHHTTCSEEEEESSCTTCCSCSSSCHHHHHHHHHCSSCEE
T ss_pred ---HHHHHHHHHHHcCCCEEEECCCCCchhhhhhhccHHHHHHhcCCCCEE
Confidence 357888999999999999998864432 35678888888888864
No 12
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=96.21 E-value=0.046 Score=40.34 Aligned_cols=98 Identities=10% Similarity=0.116 Sum_probs=65.2
Q ss_pred CHhhHHHHHHHHHhhhhcCCCcEEEEEEecCcc---------------------hHHHHHH----HHhCCC-CEEEEEec
Q psy9408 4 NPFDEIAIESAIRLRESSNKIKEIIAISCGNKK---------------------CKEILQI----AMAMGV-DRAILIET 57 (219)
Q Consensus 4 Np~D~~Ale~A~~l~e~~g~g~~V~av~~G~~~---------------------~~~~lr~----~~a~Ga-D~v~~v~~ 57 (219)
.+....||+.|.+++... +.+++.+.+-+.. +++.+++ +...|. +--+.+..
T Consensus 15 s~~s~~al~~A~~la~~~--~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~ 92 (146)
T 3s3t_A 15 SDAAQAAFTEAVNIAQRH--QANLTALYVVDDSAYHTPALDPVLSELLDAEAAHAKDAMRQRQQFVATTSAPNLKTEISY 92 (146)
T ss_dssp SHHHHHHHHHHHHHHHHH--TCEEEEEEEEECCCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCCEEEEEE
T ss_pred CHHHHHHHHHHHHHHHhc--CCEEEEEEEecCccccccccccccHHHHHHHHHHHHHHHHHHHHHHHhcCCcceEEEEec
Confidence 467889999999999986 4788888774321 1222222 234566 32233332
Q ss_pred CCCCCHHHHHHHHHH-HHHhcCCCEEEEcccccCCC----cCcHHHHHHHHcCCCcc
Q psy9408 58 DTILQSLSVAKLLQV-IVKKENPQLVILGKQSIDSD----NNQTGQMLAALLNWPQA 109 (219)
Q Consensus 58 ~~~~d~~~~A~~la~-~ik~~~~dlVl~G~~s~d~~----~~~v~~~lA~~Lg~p~v 109 (219)
+ + .+..|.+ .+++.++|+|++|....++- -|.++-.+.....+|++
T Consensus 93 g---~---~~~~I~~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~~pVl 143 (146)
T 3s3t_A 93 G---I---PKHTIEDYAKQHPEIDLIVLGATGTNSPHRVAVGSTTSYVVDHAPCNVI 143 (146)
T ss_dssp E---C---HHHHHHHHHHHSTTCCEEEEESCCSSCTTTCSSCHHHHHHHHHCSSEEE
T ss_pred C---C---hHHHHHHHHHhhcCCCEEEECCCCCCCcceEEEcchHHHHhccCCCCEE
Confidence 1 2 3577888 88889999999998755432 35677888888888854
No 13
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum}
Probab=95.88 E-value=0.073 Score=39.92 Aligned_cols=99 Identities=17% Similarity=0.140 Sum_probs=66.1
Q ss_pred CHhhHHHHHHHHHhhhhcCCCcEEEEEEecCcc-------------------hHHHHH----HHHhCCCC-EEEEEecCC
Q psy9408 4 NPFDEIAIESAIRLRESSNKIKEIIAISCGNKK-------------------CKEILQ----IAMAMGVD-RAILIETDT 59 (219)
Q Consensus 4 Np~D~~Ale~A~~l~e~~g~g~~V~av~~G~~~-------------------~~~~lr----~~~a~GaD-~v~~v~~~~ 59 (219)
.+....|++.|.+++... +.+++.+.+-+.. +++.++ .+-..|.+ --+.+...
T Consensus 27 s~~s~~al~~a~~la~~~--~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~v~~~- 103 (156)
T 3fg9_A 27 NTSSERAFRYATTLAHDY--DVPLGICSVLESEDINIFDSLTPSKIQAKRKHVEDVVAEYVQLAEQRGVNQVEPLVYEG- 103 (156)
T ss_dssp CHHHHHHHHHHHHHHHHH--TCCEEEEEEECCCCTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSEEEEEEEC-
T ss_pred CHHHHHHHHHHHHHHHhc--CCEEEEEEEEeCCCccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCceEEEEEeC-
Confidence 477889999999999986 4688888775421 222232 23456874 22233321
Q ss_pred CCCHHHHHHHHHHH-HHhcCCCEEEEcccccCCC---cCcHHHHHHHHcCCCcc
Q psy9408 60 ILQSLSVAKLLQVI-VKKENPQLVILGKQSIDSD---NNQTGQMLAALLNWPQA 109 (219)
Q Consensus 60 ~~d~~~~A~~la~~-ik~~~~dlVl~G~~s~d~~---~~~v~~~lA~~Lg~p~v 109 (219)
-+ .+..|.+. +++.++|+|++|....++- -|.++-.+.....+|++
T Consensus 104 -g~---~~~~I~~~~a~~~~~DlIV~G~~g~~~~~~~~Gs~~~~vl~~a~~PVl 153 (156)
T 3fg9_A 104 -GD---VDDVILEQVIPEFKPDLLVTGADTEFPHSKIAGAIGPRLARKAPISVI 153 (156)
T ss_dssp -SC---HHHHHHHTHHHHHCCSEEEEETTCCCTTSSSCSCHHHHHHHHCSSEEE
T ss_pred -CC---HHHHHHHHHHHhcCCCEEEECCCCCCccceeecchHHHHHHhCCCCEE
Confidence 12 34788887 8889999999998854432 35677888888888864
No 14
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes}
Probab=95.82 E-value=0.11 Score=37.97 Aligned_cols=96 Identities=15% Similarity=0.126 Sum_probs=64.1
Q ss_pred CHhhHHHHHHHHHhh-hhcCCCcEEEEEEecCc---------------------chHHHHH----HHHhCCCCEEEEEec
Q psy9408 4 NPFDEIAIESAIRLR-ESSNKIKEIIAISCGNK---------------------KCKEILQ----IAMAMGVDRAILIET 57 (219)
Q Consensus 4 Np~D~~Ale~A~~l~-e~~g~g~~V~av~~G~~---------------------~~~~~lr----~~~a~GaD~v~~v~~ 57 (219)
++....|++.|.+++ ... +.+++.+.+-+. .+++.++ .+...|.+--..+..
T Consensus 11 s~~s~~al~~a~~la~~~~--~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~v~~ 88 (138)
T 3idf_A 11 TEACERAAQYILDMFGKDA--DCTLTLIHVKPEFMLYGEAVLAAYDEIEMKEEEKAKLLTQKFSTFFTEKGINPFVVIKE 88 (138)
T ss_dssp SHHHHHHHHHHHHHHTTCT--TEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCEEEEEE
T ss_pred CHHHHHHHHHHHHHhccCC--CCEEEEEEEecCCCcccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 577889999999999 775 578988887653 1222222 233457653333332
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCCc---CcHHHHHHHHcCCCcc
Q psy9408 58 DTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDN---NQTGQMLAALLNWPQA 109 (219)
Q Consensus 58 ~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~---~~v~~~lA~~Lg~p~v 109 (219)
+ + .+..|.+.++ ++|+|++|....++-. |.++-.+.....+|++
T Consensus 89 g---~---~~~~I~~~a~--~~dliV~G~~~~~~~~~~~Gs~~~~vl~~~~~pVl 135 (138)
T 3idf_A 89 G---E---PVEMVLEEAK--DYNLLIIGSSENSFLNKIFASHQDDFIQKAPIPVL 135 (138)
T ss_dssp S---C---HHHHHHHHHT--TCSEEEEECCTTSTTSSCCCCTTCHHHHHCSSCEE
T ss_pred C---C---hHHHHHHHHh--cCCEEEEeCCCcchHHHHhCcHHHHHHhcCCCCEE
Confidence 2 2 3577888877 9999999988654322 5677788888888754
No 15
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=95.75 E-value=0.097 Score=38.81 Aligned_cols=97 Identities=14% Similarity=0.133 Sum_probs=62.5
Q ss_pred CHhhHHHHHHHHHhhhhcCCCcEEEEEEecCcc-------------------------hHHHHHHHH-hCCCC--EEEEE
Q psy9408 4 NPFDEIAIESAIRLRESSNKIKEIIAISCGNKK-------------------------CKEILQIAM-AMGVD--RAILI 55 (219)
Q Consensus 4 Np~D~~Ale~A~~l~e~~g~g~~V~av~~G~~~-------------------------~~~~lr~~~-a~GaD--~v~~v 55 (219)
++....|++.|.+++... +.+++.+.+-+.. +++.++++. .+|.+ +..+.
T Consensus 16 s~~s~~al~~a~~la~~~--~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 93 (150)
T 3tnj_A 16 SSEDSQVVQKVRNLASQI--GARLSLIHVLDNIPMPDTPYGTAIPLDTETTYDAMLDVEKQKLSQIGNTLGIDPAHRWLV 93 (150)
T ss_dssp STTHHHHHHHHHHHHHHH--TCEEEEEEEEC--------CTTCCCSSSCCCHHHHHHHHHHHHHHHHHHHTCCGGGEEEE
T ss_pred CHHHHHHHHHHHHHHhhc--CCEEEEEEEEcCccccccccccccCcCHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEe
Confidence 467889999999999986 4788888775421 122233322 24665 23333
Q ss_pred ecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccccCC---CcCcHHHHHHHHcCCCcc
Q psy9408 56 ETDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDS---DNNQTGQMLAALLNWPQA 109 (219)
Q Consensus 56 ~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~---~~~~v~~~lA~~Lg~p~v 109 (219)
.+ ++ +..|.+.+++.++|+|++|....++ --|.++-.+.....+|++
T Consensus 94 ~g----~~---~~~I~~~a~~~~~dliV~G~~~~~~~~~~~Gs~~~~vl~~~~~pVl 143 (150)
T 3tnj_A 94 WG----EP---REEIIRIAEQENVDLIVVGSHGRHGLALLLGSTANSVLHYAKCDVL 143 (150)
T ss_dssp ES----CH---HHHHHHHHHHTTCSEEEEEEC--------CCCHHHHHHHHCSSEEE
T ss_pred cC----CH---HHHHHHHHHHcCCCEEEEecCCCCCcCeEecchHHHHHHhCCCCEE
Confidence 31 22 4888889999999999999875443 235677788888888754
No 16
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=95.70 E-value=0.11 Score=38.02 Aligned_cols=93 Identities=10% Similarity=0.001 Sum_probs=61.9
Q ss_pred hHHHHHHHHHhhhhcCCCcEEEEEEecCcc-----------------------hHHHHHHHH-hCCCC----EEEEEecC
Q psy9408 7 DEIAIESAIRLRESSNKIKEIIAISCGNKK-----------------------CKEILQIAM-AMGVD----RAILIETD 58 (219)
Q Consensus 7 D~~Ale~A~~l~e~~g~g~~V~av~~G~~~-----------------------~~~~lr~~~-a~GaD----~v~~v~~~ 58 (219)
...|++.|.+++... +.+++.+.+-+.. ..+.+++.+ .+|.+ +..+..
T Consensus 16 s~~al~~a~~la~~~--~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~-- 91 (143)
T 3fdx_A 16 TERIISHVESEARID--DAEVHFLTVIPSLPYYASLGMAYTAELPGMDELREGSETQLKEIAKKFSIPEDRMHFHVAE-- 91 (143)
T ss_dssp CTTHHHHHHHHHHHH--TCEEEEEEEECC----------------CHHHHHHHHHHHHHHHHTTSCCCGGGEEEEEEE--
T ss_pred HHHHHHHHHHHHHhc--CCeEEEEEEecCCcccccccccccchhhhHHHHHHHHHHHHHHHHHHcCCCCCceEEEEEe--
Confidence 678999999999886 4788888775531 111233322 35544 222322
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCC----cCcHHHHHHHHcCCCcc
Q psy9408 59 TILQSLSVAKLLQVIVKKENPQLVILGKQSIDSD----NNQTGQMLAALLNWPQA 109 (219)
Q Consensus 59 ~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~----~~~v~~~lA~~Lg~p~v 109 (219)
+ + .+..|.+.+++.++|+|++|... .+- -|.++-.+.....+|++
T Consensus 92 -g-~---~~~~I~~~a~~~~~dliV~G~~~-~~~~~~~~Gs~~~~v~~~~~~pVl 140 (143)
T 3fdx_A 92 -G-S---PKDKILALAKSLPADLVIIASHR-PDITTYLLGSNAAAVVRHAECSVL 140 (143)
T ss_dssp -S-C---HHHHHHHHHHHTTCSEEEEESSC-TTCCSCSSCHHHHHHHHHCSSEEE
T ss_pred -c-C---hHHHHHHHHHHhCCCEEEEeCCC-CCCeeeeeccHHHHHHHhCCCCEE
Confidence 1 3 35888899999999999999984 332 25677888888888864
No 17
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=95.10 E-value=0.33 Score=36.33 Aligned_cols=98 Identities=14% Similarity=0.172 Sum_probs=64.4
Q ss_pred CHhhHHHHHHHHHhhhhcCCCcEEEEEEecCcc-----------------------------------hHHHHHH----H
Q psy9408 4 NPFDEIAIESAIRLRESSNKIKEIIAISCGNKK-----------------------------------CKEILQI----A 44 (219)
Q Consensus 4 Np~D~~Ale~A~~l~e~~g~g~~V~av~~G~~~-----------------------------------~~~~lr~----~ 44 (219)
.+....||+.|.+++... +.+++.+.+-+.. +++.+.+ +
T Consensus 15 s~~s~~al~~a~~la~~~--~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 92 (162)
T 1mjh_A 15 SETAEIALKHVKAFKTLK--AEEVILLHVIDEREIKKRDIFSLLLGVAGLNKSVEEFENELKNKLTEEAKNKMENIKKEL 92 (162)
T ss_dssp CHHHHHHHHHHHHTCCSS--CCEEEEEEEEEGGGTC-----------------CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhc--CCeEEEEEEecCccccccccccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467789999999999876 4688777653211 0111222 2
Q ss_pred HhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCC----cCcHHHHHHHHcCCCcc
Q psy9408 45 MAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSD----NNQTGQMLAALLNWPQA 109 (219)
Q Consensus 45 ~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~----~~~v~~~lA~~Lg~p~v 109 (219)
...|.+--+.+..+ + .+..|.+.+++.++|+|++|....++- -|.++-.+.....+|++
T Consensus 93 ~~~g~~~~~~v~~G---~---~~~~I~~~a~~~~~dlIV~G~~g~~~~~~~~~GSv~~~vl~~~~~pVl 155 (162)
T 1mjh_A 93 EDVGFKVKDIIVVG---I---PHEEIVKIAEDEGVDIIIMGSHGKTNLKEILLGSVTENVIKKSNKPVL 155 (162)
T ss_dssp HHTTCEEEEEEEEE---C---HHHHHHHHHHHTTCSEEEEESCCSSCCTTCSSCHHHHHHHHHCCSCEE
T ss_pred HHcCCceEEEEcCC---C---HHHHHHHHHHHcCCCEEEEcCCCCCCccceEecchHHHHHHhCCCCEE
Confidence 34576533333321 2 357888999999999999998865432 35678888888888865
No 18
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=95.01 E-value=0.45 Score=36.17 Aligned_cols=97 Identities=12% Similarity=0.065 Sum_probs=64.0
Q ss_pred CHhhHHHHHHHHHhhhhcCCCcEEEEE--EecCc--------------------chHHHHH----HHHhCCCC-EEEEEe
Q psy9408 4 NPFDEIAIESAIRLRESSNKIKEIIAI--SCGNK--------------------KCKEILQ----IAMAMGVD-RAILIE 56 (219)
Q Consensus 4 Np~D~~Ale~A~~l~e~~g~g~~V~av--~~G~~--------------------~~~~~lr----~~~a~GaD-~v~~v~ 56 (219)
.+....|++.|.+++. . +.+++.+ .+-+. .+++.++ .+...|.+ --+.+.
T Consensus 27 s~~s~~al~~A~~lA~-~--~a~l~ll~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gv~~v~~~v~ 103 (163)
T 1tq8_A 27 SDSSMRAVDRAAQIAG-A--DAKLIIASAYLPQHEDARAADILKDESYKVTGTAPIYEILHDAKERAHNAGAKNVEERPI 103 (163)
T ss_dssp SHHHHHHHHHHHHHHT-T--TSEEEEEEECCC--------------------CCTHHHHHHHHHHHHHTTTCCEEEEEEE
T ss_pred CHHHHHHHHHHHHHhC-C--CCEEEEEEeeeccCcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 4678899999999998 6 4788888 44211 0122222 23346776 223333
Q ss_pred cCCCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCC----cCcHHHHHHHHcCCCcc
Q psy9408 57 TDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSD----NNQTGQMLAALLNWPQA 109 (219)
Q Consensus 57 ~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~----~~~v~~~lA~~Lg~p~v 109 (219)
. + ++ +..|.+.+++.++|+|++|....++- -|.++-.+.....+|++
T Consensus 104 ~--G-~~---~~~I~~~a~~~~~DLIV~G~~g~~~~~~~~lGSva~~vl~~a~~PVl 154 (163)
T 1tq8_A 104 V--G-AP---VDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRAKVDVL 154 (163)
T ss_dssp C--S-SH---HHHHHHHHHHTTCSEEEEECCCCCSHHHHHTBBHHHHHHHHTTCEEE
T ss_pred c--C-CH---HHHHHHHHHhcCCCEEEECCCCCCcccceeeccHHHHHHHhCCCCEE
Confidence 1 1 33 68888999999999999999865431 25677788888887754
No 19
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=94.98 E-value=0.28 Score=40.70 Aligned_cols=98 Identities=15% Similarity=0.133 Sum_probs=69.2
Q ss_pred CHhhHHHHHHHHHhhhhcCCCcEEEEEEecCcc-----hHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcC
Q psy9408 4 NPFDEIAIESAIRLRESSNKIKEIIAISCGNKK-----CKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKEN 78 (219)
Q Consensus 4 Np~D~~Ale~A~~l~e~~g~g~~V~av~~G~~~-----~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~ 78 (219)
++.+..+|+.|.+++... +.+++++.+.+.. .++..+.+-..|.+--+.+.. + + .+..|.+.+++.+
T Consensus 180 s~~s~~al~~a~~la~~~--~~~l~ll~v~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~--g-~---~~~~I~~~a~~~~ 251 (294)
T 3loq_A 180 SKWADRALEYAKFVVKKT--GGELHIIHVSEDGDKTADLRVMEEVIGAEGIEVHVHIES--G-T---PHKAILAKREEIN 251 (294)
T ss_dssp SHHHHHHHHHHHHHHHHH--TCEEEEEEECSSSCCHHHHHHHHHHHHHTTCCEEEEEEC--S-C---HHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHhhhc--CCEEEEEEEccCchHHHHHHHHHHHHHHcCCcEEEEEec--C-C---HHHHHHHHHHhcC
Confidence 477889999999999876 4799999987643 233344455678873334432 2 3 3588889999999
Q ss_pred CCEEEEcccccCCC----cCcHHHHHHHHcCCCcc
Q psy9408 79 PQLVILGKQSIDSD----NNQTGQMLAALLNWPQA 109 (219)
Q Consensus 79 ~dlVl~G~~s~d~~----~~~v~~~lA~~Lg~p~v 109 (219)
+|+|++|....++- -|.++-.+.....+|++
T Consensus 252 ~dLlV~G~~~~~~~~~~~~Gs~~~~vl~~~~~pvL 286 (294)
T 3loq_A 252 ATTIFMGSRGAGSVMTMILGSTSESVIRRSPVPVF 286 (294)
T ss_dssp CSEEEEECCCCSCHHHHHHHCHHHHHHHHCSSCEE
T ss_pred cCEEEEeCCCCCCccceeeCcHHHHHHhcCCCCEE
Confidence 99999999865432 23456677777777754
No 20
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=94.92 E-value=0.1 Score=38.17 Aligned_cols=95 Identities=9% Similarity=0.109 Sum_probs=58.7
Q ss_pred CHhhHHHHHHHHHhhhhcCCCcEEEEEEec-C-c--------------------chHHHHHHHH-hCCCCE--EEEEecC
Q psy9408 4 NPFDEIAIESAIRLRESSNKIKEIIAISCG-N-K--------------------KCKEILQIAM-AMGVDR--AILIETD 58 (219)
Q Consensus 4 Np~D~~Ale~A~~l~e~~g~g~~V~av~~G-~-~--------------------~~~~~lr~~~-a~GaD~--v~~v~~~ 58 (219)
++....|++.|.+++... +.+++.+.+- + + .+++.++++. ..|.+. ..+..+
T Consensus 12 s~~s~~al~~a~~la~~~--~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g- 88 (141)
T 1jmv_A 12 SEESPILLKKAVGIAKRH--DAKLSIIHVDVNFSDLYTGLIDVNMSSMQDRISTETQKALLDLAESVDYPISEKLSGSG- 88 (141)
T ss_dssp STTHHHHHHHHHHHHHHH--TCEEEEEEEEECCGGGCCCCEEHHHHHHTTCCCCHHHHHHHHHHHHSSSCCCCEEEEEE-
T ss_pred chhhHHHHHHHHHHHHhc--CCEEEEEEEecCchhhhccccccchHHHHHHHHHHHHHHHHHHHHHcCCCceEEEEecC-
Confidence 467789999999999886 4688887664 2 1 1123344433 357653 222221
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCCc--CcHHHHHHHHcCCCc
Q psy9408 59 TILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDN--NQTGQMLAALLNWPQ 108 (219)
Q Consensus 59 ~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~--~~v~~~lA~~Lg~p~ 108 (219)
+ .+..|.+.+++.++|+|++|.. .++-. +.++-.+.....+|+
T Consensus 89 ---~---~~~~I~~~a~~~~~dliV~G~~-~~~~~~lgs~~~~vl~~~~~pV 133 (141)
T 1jmv_A 89 ---D---LGQVLSDAIEQYDVDLLVTGHH-QDFWSKLMSSTRQVMNTIKIDM 133 (141)
T ss_dssp ---C---HHHHHHHHHHHTTCCEEEEEEC-CCCHHHHHHHHHHHHTTCCSEE
T ss_pred ---C---HHHHHHHHHHhcCCCEEEEeCC-CchhhhhcchHHHHHhcCCCCE
Confidence 2 3578888999999999999988 54322 133444444445553
No 21
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=94.89 E-value=0.27 Score=37.28 Aligned_cols=98 Identities=15% Similarity=0.040 Sum_probs=64.1
Q ss_pred CHhhHHHHHHHHHhhhhcCCCcEEEEEEecCcc------------------------------hHHHHHH----HHhCCC
Q psy9408 4 NPFDEIAIESAIRLRESSNKIKEIIAISCGNKK------------------------------CKEILQI----AMAMGV 49 (219)
Q Consensus 4 Np~D~~Ale~A~~l~e~~g~g~~V~av~~G~~~------------------------------~~~~lr~----~~a~Ga 49 (219)
++....||+.|.+++... +.+++.+.+-+.. +++.+++ +-..|.
T Consensus 15 s~~s~~al~~A~~la~~~--~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~ 92 (170)
T 2dum_A 15 SEGAYRAVEVFEKRNKME--VGEVILLHVIDEGTLEELMDGYSFFYDNAEIELKDIKEKLKEEASRKLQEKAEEVKRAFR 92 (170)
T ss_dssp SHHHHHHHHHHHHHCCSC--CSEEEEEEEEETTGGGCCC------------CCTTSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHhc--CCEEEEEEEecCccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 567789999999999876 4788877652110 1122222 223576
Q ss_pred CEEE--EEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCC----cCcHHHHHHHHcCCCcc
Q psy9408 50 DRAI--LIETDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSD----NNQTGQMLAALLNWPQA 109 (219)
Q Consensus 50 D~v~--~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~----~~~v~~~lA~~Lg~p~v 109 (219)
+--+ .+..+ + .+..|.+.+++.++|+|++|....++- -|.++-.+.....+|++
T Consensus 93 ~~~~~~~~~~g---~---~~~~I~~~a~~~~~DlIV~G~~g~~~~~~~~~Gsv~~~vl~~~~~PVl 152 (170)
T 2dum_A 93 AKNVRTIIRFG---I---PWDEIVKVAEEENVSLIILPSRGKLSLSHEFLGSTVMRVLRKTKKPVL 152 (170)
T ss_dssp CSEEEEEEEEE---C---HHHHHHHHHHHTTCSEEEEESCCCCC--TTCCCHHHHHHHHHCSSCEE
T ss_pred ceeeeeEEecC---C---hHHHHHHHHHHcCCCEEEECCCCCCccccceechHHHHHHHhCCCCEE
Confidence 5332 33211 2 357888999999999999998865432 35678888888888865
No 22
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=94.50 E-value=0.27 Score=40.75 Aligned_cols=98 Identities=10% Similarity=0.033 Sum_probs=68.9
Q ss_pred HhhHHHHHHHHHhhhhcCCCcEEEEEEecCc-chHHH----HHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCC
Q psy9408 5 PFDEIAIESAIRLRESSNKIKEIIAISCGNK-KCKEI----LQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENP 79 (219)
Q Consensus 5 p~D~~Ale~A~~l~e~~g~g~~V~av~~G~~-~~~~~----lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~ 79 (219)
+....||+.|.+|++.. +.+++.+.+-++ .+++. .+.+...|.+--+.+.. ..+ .+..|.+.+++.++
T Consensus 18 ~~s~~al~~A~~la~~~--~a~l~ll~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~g~---~~~~i~~~a~~~~~ 90 (290)
T 3mt0_A 18 QLEGLALKRAQLIAGVT--QSHLHLLVCEKRRDHSAALNDLAQELREEGYSVSTNQAW--KDS---LHQTIIAEQQAEGC 90 (290)
T ss_dssp CSCCHHHHHHHHHHHHH--CCEEEEEEECSSSCCHHHHHHHHHHHHHTTCCEEEEEEC--SSS---HHHHHHHHHHHHTC
T ss_pred ccchHHHHHHHHHHHhc--CCeEEEEEeeCcHHHHHHHHHHHHHHhhCCCeEEEEEEe--CCC---HHHHHHHHHHhcCC
Confidence 56688999999999987 479999988642 22333 33444567765444431 112 24778888888999
Q ss_pred CEEEEcccccCCC----cCcHHHHHHHHcCCCcc
Q psy9408 80 QLVILGKQSIDSD----NNQTGQMLAALLNWPQA 109 (219)
Q Consensus 80 dlVl~G~~s~d~~----~~~v~~~lA~~Lg~p~v 109 (219)
|+|++|....++- -|.+.-.+....++|++
T Consensus 91 dliV~G~~~~~~~~~~~~gs~~~~vl~~~~~PVl 124 (290)
T 3mt0_A 91 GLIIKQHFPDNPLKKAILTPDDWKLLRFAPCPVL 124 (290)
T ss_dssp SEEEEECCCSCTTSTTSCCHHHHHHHHHCSSCEE
T ss_pred CEEEEecccCCchhhcccCHHHHHHHhcCCCCEE
Confidence 9999998765432 35788888889898865
No 23
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4
Probab=93.06 E-value=0.48 Score=34.40 Aligned_cols=92 Identities=14% Similarity=0.010 Sum_probs=60.0
Q ss_pred CHhhHHHHHHHHHhhhhcCCCcEEEEEEec-Cc------------------------chHHHHHHHHhC---CC--CEEE
Q psy9408 4 NPFDEIAIESAIRLRESSNKIKEIIAISCG-NK------------------------KCKEILQIAMAM---GV--DRAI 53 (219)
Q Consensus 4 Np~D~~Ale~A~~l~e~~g~g~~V~av~~G-~~------------------------~~~~~lr~~~a~---Ga--D~v~ 53 (219)
.+....||+.|.+++... +.+++.+.+- +. .+++.++++ .. +. .--+
T Consensus 14 s~~s~~al~~a~~la~~~--~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~ 90 (138)
T 1q77_A 14 YSDCEKAITYAVNFSEKL--GAELDILAVLEDVYNLERANVTFGLPFPPEIKEESKKRIERRLREV-WEKLTGSTEIPGV 90 (138)
T ss_dssp TCCCHHHHHHHHHHHTTT--CCEEEEEEECHHHHHHHHHHHHHCCCCCTHHHHHHHHHHHHHHHHH-HHHHHSCCCCCCE
T ss_pred CHhHHHHHHHHHHHHHHc--CCeEEEEEEecccccccccccccCCCCChHHHHHHHHHHHHHHHHH-HHHhhccCCcceE
Confidence 356788999999999876 4788888765 31 011223333 21 21 1111
Q ss_pred EEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcc
Q psy9408 54 LIETDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQA 109 (219)
Q Consensus 54 ~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~v 109 (219)
.+.. -+ .+..|.+.+++.++|+|++|.... .++-.+.....+|++
T Consensus 91 ~~~~---g~---~~~~I~~~a~~~~~dliV~G~~g~-----sv~~~vl~~a~~PVl 135 (138)
T 1q77_A 91 EYRI---GP---LSEEVKKFVEGKGYELVVWACYPS-----AYLCKVIDGLNLASL 135 (138)
T ss_dssp EEEC---SC---HHHHHHHHHTTSCCSEEEECSCCG-----GGTHHHHHHSSSEEE
T ss_pred EEEc---CC---HHHHHHHHHHhcCCCEEEEeCCCC-----chHHHHHHhCCCceE
Confidence 2221 13 357888899999999999998743 588888888888864
No 24
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=92.49 E-value=1.1 Score=37.36 Aligned_cols=97 Identities=13% Similarity=0.019 Sum_probs=64.2
Q ss_pred HhhHHHHHHHHHhhhhcCCCcEEEEEEecCc-----------------------chHHHHHH----HHhCCCCEEEEEe-
Q psy9408 5 PFDEIAIESAIRLRESSNKIKEIIAISCGNK-----------------------KCKEILQI----AMAMGVDRAILIE- 56 (219)
Q Consensus 5 p~D~~Ale~A~~l~e~~g~g~~V~av~~G~~-----------------------~~~~~lr~----~~a~GaD~v~~v~- 56 (219)
+....||.+|.+|++.. +.+++.+.+-+. .+++.+++ +...|..--+.+.
T Consensus 18 ~~s~~al~~A~~lA~~~--~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~ 95 (319)
T 3olq_A 18 QDDQPALRRAVYIVQRN--GGRIKAFLPVYDLSYDMTTLLSPDERNAMRKGVINQKTAWIKQQARYYLEAGIQIDIKVIW 95 (319)
T ss_dssp CSCCHHHHHHHHHHHHH--CCEEEEEEEECCGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred cccHHHHHHHHHHHHHc--CCeEEEEEEecccchhhccccChhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEEEe
Confidence 45578999999999987 478888876321 01122222 2345766444443
Q ss_pred cCCCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCC----cCcHHHHHHHHcCCCcc
Q psy9408 57 TDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSD----NNQTGQMLAALLNWPQA 109 (219)
Q Consensus 57 ~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~----~~~v~~~lA~~Lg~p~v 109 (219)
.. + .+..|.+.+++.++|+|++|....++. -|.+.-.+....++|++
T Consensus 96 ~g---~---~~~~i~~~a~~~~~DLiV~G~~g~~~~~~~~~Gs~~~~vl~~~~~PVl 146 (319)
T 3olq_A 96 HN---R---PYEAIIEEVITDKHDLLIKMAHQHDKLGSLIFTPLDWQLLRKCPAPVW 146 (319)
T ss_dssp CS---C---HHHHHHHHHHHHTCSEEEEEEBCC--CCSCBCCHHHHHHHHHCSSCEE
T ss_pred cC---C---hHHHHHHHHHhcCCCEEEEecCcCchhhcccccccHHHHHhcCCCCEE
Confidence 22 2 347788888888999999998865432 35678888899999865
No 25
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=92.38 E-value=0.78 Score=37.91 Aligned_cols=94 Identities=13% Similarity=0.097 Sum_probs=61.5
Q ss_pred hHHHHHHHHHhhhhcCCCcEEEEEEecCcc------------------hHHHHHHH-HhCCCC--EEEEEecCCCCCHHH
Q psy9408 7 DEIAIESAIRLRESSNKIKEIIAISCGNKK------------------CKEILQIA-MAMGVD--RAILIETDTILQSLS 65 (219)
Q Consensus 7 D~~Ale~A~~l~e~~g~g~~V~av~~G~~~------------------~~~~lr~~-~a~GaD--~v~~v~~~~~~d~~~ 65 (219)
...+++.|.+++... +.+++.+.+-+.. .++.+++. -.+|.+ +..+..+ +
T Consensus 154 s~~al~~a~~la~~~--~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~v~~g----~--- 224 (290)
T 3mt0_A 154 HAGIISHAYDIAGLA--KATLHVISAHPSPMLSSADPTFQLSETIEARYREACRTFQAEYGFSDEQLHIEEG----P--- 224 (290)
T ss_dssp HHHHHHHHHHHHHHT--TCEEEEEEEEC---------CHHHHHHHHHHHHHHHHHHHHHHTCCTTTEEEEES----C---
T ss_pred HHHHHHHHHHHHHHc--CCeEEEEEEecCccccccCchhHHHHHHHHHHHHHHHHHHHHcCCCcceEEEecc----C---
Confidence 688999999999986 4789888775521 12223322 235764 2333331 3
Q ss_pred HHHHHHHHHHhcCCCEEEEcccccCCC----cCcHHHHHHHHcCCCcc
Q psy9408 66 VAKLLQVIVKKENPQLVILGKQSIDSD----NNQTGQMLAALLNWPQA 109 (219)
Q Consensus 66 ~A~~la~~ik~~~~dlVl~G~~s~d~~----~~~v~~~lA~~Lg~p~v 109 (219)
.+..|.+.+++.++|+|++|....++- -|.++-.+.....+|++
T Consensus 225 ~~~~I~~~a~~~~~dLiVmG~~g~~~~~~~~~Gsv~~~vl~~~~~pVL 272 (290)
T 3mt0_A 225 ADVLIPRTAQKLDAVVTVIGTVARTGLSGALIGNTAEVVLDTLESDVL 272 (290)
T ss_dssp HHHHHHHHHHHHTCSEEEEECCSSCCGGGCCSCHHHHHHHTTCSSEEE
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCcCCcceecchHHHHHHhcCCCCEE
Confidence 358888999999999999998765443 24566666666666644
No 26
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=92.22 E-value=1.6 Score=32.92 Aligned_cols=98 Identities=14% Similarity=0.156 Sum_probs=58.5
Q ss_pred hhHHHHHHHHHhhhhc-CCCcEEEEEEecCcc---------------------------hHHHHHH----HHhCCCCEEE
Q psy9408 6 FDEIAIESAIRLRESS-NKIKEIIAISCGNKK---------------------------CKEILQI----AMAMGVDRAI 53 (219)
Q Consensus 6 ~D~~Ale~A~~l~e~~-g~g~~V~av~~G~~~---------------------------~~~~lr~----~~a~GaD~v~ 53 (219)
....||+.|.+++.+. ..+.+++++.+-+.. +++.+++ +...|.+--+
T Consensus 26 ~s~~al~~a~~la~~~~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~ 105 (175)
T 2gm3_A 26 SCKRAFEWTLEKIVRSNTSDFKILLLHVQVVDEDGFDDVDSIYASPEDFRDMRQSNKAKGLHLLEFFVNKCHEIGVGCEA 105 (175)
T ss_dssp HHHHHHHHHHHHTTTTCTTSEEEEEEEEEC----------CCCCSHHHHHHHTTSHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHhhcccCCCCEEEEEEEeecccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCceEE
Confidence 7789999999975321 014678777553110 1122222 2345765433
Q ss_pred EEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCC----cCcHHHHHHHHcCCCcc
Q psy9408 54 LIETDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSD----NNQTGQMLAALLNWPQA 109 (219)
Q Consensus 54 ~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~----~~~v~~~lA~~Lg~p~v 109 (219)
.+..+ + .+..|.+.+++.++|+|++|....++- -|.++-.+.....+|++
T Consensus 106 ~v~~G---~---~~~~I~~~a~~~~~DLIVmG~~g~~~~~~~~~Gsva~~vl~~a~~pVl 159 (175)
T 2gm3_A 106 WIKTG---D---PKDVICQEVKRVRPDFLVVGSRGLGRFQKVFVGTVSAFCVKHAECPVM 159 (175)
T ss_dssp EEEES---C---HHHHHHHHHHHHCCSEEEEEECCCC--------CHHHHHHHHCSSCEE
T ss_pred EEecC---C---HHHHHHHHHHHhCCCEEEEeCCCCChhhhhhcCchHHHHHhCCCCCEE
Confidence 33321 3 357888999999999999998754431 24566777777777754
No 27
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=92.05 E-value=1.6 Score=33.91 Aligned_cols=78 Identities=17% Similarity=0.229 Sum_probs=55.2
Q ss_pred EEEEEecCcc----hHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHH
Q psy9408 27 IIAISCGNKK----CKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAA 102 (219)
Q Consensus 27 V~av~~G~~~----~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~ 102 (219)
.++|.||+.+ .++....+-.+|..--+.+.. .+-.++..-+.+.++-++.++++|+++.. -.+++|+.+|.
T Consensus 4 ~V~Iimgs~SD~~v~~~a~~~l~~~gi~~ev~V~s-aHR~p~~~~~~~~~a~~~~~~~ViIa~AG----~aa~LpgvvA~ 78 (159)
T 3rg8_A 4 LVIILMGSSSDMGHAEKIASELKTFGIEYAIRIGS-AHKTAEHVVSMLKEYEALDRPKLYITIAG----RSNALSGFVDG 78 (159)
T ss_dssp EEEEEESSGGGHHHHHHHHHHHHHTTCEEEEEECC-TTTCHHHHHHHHHHHHTSCSCEEEEEECC----SSCCHHHHHHH
T ss_pred eEEEEECcHHHHHHHHHHHHHHHHcCCCEEEEEEc-ccCCHHHHHHHHHHhhhcCCCcEEEEECC----chhhhHHHHHh
Confidence 3678888865 344555666899886666653 35566665555555443346999999884 45889999999
Q ss_pred HcCCCcc
Q psy9408 103 LLNWPQA 109 (219)
Q Consensus 103 ~Lg~p~v 109 (219)
.-..|+|
T Consensus 79 ~t~~PVI 85 (159)
T 3rg8_A 79 FVKGATI 85 (159)
T ss_dssp HSSSCEE
T ss_pred ccCCCEE
Confidence 9999987
No 28
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A*
Probab=91.55 E-value=2.7 Score=34.92 Aligned_cols=96 Identities=19% Similarity=0.200 Sum_probs=63.6
Q ss_pred CHhhHHHHHHHHHhhhhcCCCcEEEEEEecCcc----------------hHHHHHHHHh------CCCCEEEEEecCCCC
Q psy9408 4 NPFDEIAIESAIRLRESSNKIKEIIAISCGNKK----------------CKEILQIAMA------MGVDRAILIETDTIL 61 (219)
Q Consensus 4 Np~D~~Ale~A~~l~e~~g~g~~V~av~~G~~~----------------~~~~lr~~~a------~GaD~v~~v~~~~~~ 61 (219)
++.+..+|+.|.+++... +.+++.+.+-+.. +++.+++++. .|.+--+.+.. +
T Consensus 181 s~~s~~al~~a~~la~~~--~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--g- 255 (309)
T 3cis_A 181 SSASELATAIAFDEASRR--NVDLVALHAWSDVDVSEWPGIDWPATQSMAEQVLAERLAGWQERYPNVAITRVVVR--D- 255 (309)
T ss_dssp SHHHHHHHHHHHHHHHHT--TCCEEEEEESCSSCCTTCSSCCHHHHHHHHHHHHHHHHTTHHHHCTTSCEEEEEES--S-
T ss_pred ChHHHHHHHHHHHHHHhc--CCEEEEEEEeecccccCCCcccHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEEEc--C-
Confidence 567889999999999876 4688888875431 1222333332 36554444442 1
Q ss_pred CHHHHHHHHHHHHHhcCCCEEEEcccccCCC----cCcHHHHHHHHcCCCcc
Q psy9408 62 QSLSVAKLLQVIVKKENPQLVILGKQSIDSD----NNQTGQMLAALLNWPQA 109 (219)
Q Consensus 62 d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~----~~~v~~~lA~~Lg~p~v 109 (219)
+ .+..|.+.++ ++|+|++|....++- -|.++-.+.....+|++
T Consensus 256 ~---~~~~I~~~a~--~adliV~G~~~~~~~~~~l~Gsv~~~vl~~~~~pVl 302 (309)
T 3cis_A 256 Q---PARQLVQRSE--EAQLVVVGSRGRGGYAGMLVGSVGETVAQLARTPVI 302 (309)
T ss_dssp C---HHHHHHHHHT--TCSEEEEESSCSSCCTTCSSCHHHHHHHHHCSSCEE
T ss_pred C---HHHHHHHhhC--CCCEEEECCCCCCCccccccCcHHHHHHhcCCCCEE
Confidence 3 3467777776 899999998865432 35677888888888865
No 29
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=91.25 E-value=1.3 Score=36.53 Aligned_cols=50 Identities=16% Similarity=0.200 Sum_probs=37.2
Q ss_pred HHHHHHHHhCCCCEEEEEecCC--CCCHHHHHHHHHHHHHhcCCCEEEEccc
Q psy9408 38 KEILQIAMAMGVDRAILIETDT--ILQSLSVAKLLQVIVKKENPQLVILGKQ 87 (219)
Q Consensus 38 ~~~lr~~~a~GaD~v~~v~~~~--~~d~~~~A~~la~~ik~~~~dlVl~G~~ 87 (219)
+|..+.+-.+|++..+.+.-+. ..+.......|++++++.+||+|++...
T Consensus 55 ~E~~~A~~~LGv~~~~~L~~~D~~~~~~~~~~~~l~~~ir~~~PdvV~t~~~ 106 (242)
T 2ixd_A 55 EEAKVAARIMGVKTRLNLAMPDRGLYMKEEYIREIVKVIRTYKPKLVFAPYY 106 (242)
T ss_dssp HHHHHHHHHHTCCEEEEEEECTTCCCCCHHHHHHHHHHHHHHCCSEEEEECS
T ss_pred HHHHHHHHHcCCCeEEECCCCCCCCCChHHHHHHHHHHHHHcCCCEEEECCC
Confidence 4555666678999766666432 2345778899999999999999998764
No 30
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A*
Probab=90.56 E-value=2.4 Score=34.23 Aligned_cols=96 Identities=15% Similarity=0.044 Sum_probs=64.9
Q ss_pred CHhhHHHHHHHHHhhhhcCCCcEEEEEEecCcc--hH----HHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc
Q psy9408 4 NPFDEIAIESAIRLRESSNKIKEIIAISCGNKK--CK----EILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE 77 (219)
Q Consensus 4 Np~D~~Ale~A~~l~e~~g~g~~V~av~~G~~~--~~----~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~ 77 (219)
++....+|+.|.+++... +.+++.+.+.+.. .+ +..+.+...|.+--+.+.. -+ .++.|.+.+++.
T Consensus 164 s~~~~~al~~a~~la~~~--~a~l~ll~v~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~---g~---~~~~i~~~a~~~ 235 (268)
T 3ab8_A 164 SESAVRALHALAPLARAL--GLGVRVVSVHEDPARAEAWALEAEAYLRDHGVEASALVLG---GD---AADHLLRLQGPG 235 (268)
T ss_dssp CHHHHHHHHHHHHHHHHH--TCCEEEEEECSSHHHHHHHHHHHHHHHHHTTCCEEEEEEC---SC---HHHHHHHHCCTT
T ss_pred CHHHHHHHHHHHHhhhcC--CCEEEEEEEcCcHHHHHHHHHHHHHHHHHcCCceEEEEeC---CC---hHHHHHHHHHhC
Confidence 567788999999999876 4689999887652 12 2233344567764444442 13 347777787766
Q ss_pred CCCEEEEcccccCCCcCcHHHHHHHHcCCCcc
Q psy9408 78 NPQLVILGKQSIDSDNNQTGQMLAALLNWPQA 109 (219)
Q Consensus 78 ~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~v 109 (219)
|+|++|......--|.++-.+.....+|++
T Consensus 236 --dliV~G~~~~~~~~Gs~~~~vl~~~~~pvl 265 (268)
T 3ab8_A 236 --DLLALGAPVRRLVFGSTAERVIRNAQGPVL 265 (268)
T ss_dssp --EEEEEECCCSCCSSCCHHHHHHHHCSSCEE
T ss_pred --CEEEECCcccccEeccHHHHHHhcCCCCEE
Confidence 999999822222346788888888888865
No 31
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=90.20 E-value=3.1 Score=32.78 Aligned_cols=79 Identities=15% Similarity=0.159 Sum_probs=54.9
Q ss_pred cEEEEEEecCcc----hHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHH
Q psy9408 25 KEIIAISCGNKK----CKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQML 100 (219)
Q Consensus 25 ~~V~av~~G~~~----~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~l 100 (219)
...++|.||+.+ .++....+-.+|++--+.+.. .+-.++..-+.. +-.++.++++|+++.. ..+++|+.+
T Consensus 12 ~P~V~IimGS~SD~~v~~~a~~~l~~~gi~~ev~V~s-aHR~p~~l~~~~-~~a~~~g~~ViIa~AG----~aahLpgvv 85 (173)
T 4grd_A 12 APLVGVLMGSSSDWDVMKHAVAILQEFGVPYEAKVVS-AHRMPDEMFDYA-EKARERGLRAIIAGAG----GAAHLPGML 85 (173)
T ss_dssp SCSEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECC-TTTSHHHHHHHH-HHHTTTTCSEEEEEEE----SSCCHHHHH
T ss_pred CCeEEEEeCcHhHHHHHHHHHHHHHHcCCCEEEEEEc-cccCHHHHHHHH-HHHHhcCCeEEEEecc----ccccchhhh
Confidence 356888999876 455566677899886555552 244555443333 3334568999998874 358899999
Q ss_pred HHHcCCCcc
Q psy9408 101 AALLNWPQA 109 (219)
Q Consensus 101 A~~Lg~p~v 109 (219)
|..-..|+|
T Consensus 86 A~~t~~PVI 94 (173)
T 4grd_A 86 AAKTTVPVL 94 (173)
T ss_dssp HHHCCSCEE
T ss_pred eecCCCCEE
Confidence 999999977
No 32
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1
Probab=89.85 E-value=1.6 Score=35.56 Aligned_cols=50 Identities=14% Similarity=0.157 Sum_probs=37.1
Q ss_pred HHHHHHHHhCCCCEEEEEecCC--CCCHHHHHHHHHHHHHhcCCCEEEEccc
Q psy9408 38 KEILQIAMAMGVDRAILIETDT--ILQSLSVAKLLQVIVKKENPQLVILGKQ 87 (219)
Q Consensus 38 ~~~lr~~~a~GaD~v~~v~~~~--~~d~~~~A~~la~~ik~~~~dlVl~G~~ 87 (219)
+|..+.+..+|++..+.+.-+. ..+.......|.+++++.+||+|++...
T Consensus 53 ~E~~~A~~~lG~~~~~~l~~~D~~l~~~~~~~~~l~~~ir~~~P~~V~t~~~ 104 (227)
T 1uan_A 53 KEVAEASRILGLDFRGNLGFPDGGLADVPEQRLKLAQALRRLRPRVVFAPLE 104 (227)
T ss_dssp HHHHHHHHHHTCSEEEEEEECTTCCCCCHHHHHHHHHHHHHHCEEEEEEECS
T ss_pred HHHHHHHHhcCCCeEEECCCCCCCCCChHHHHHHHHHHHHHhCCCEEEeCCC
Confidence 4555566678999876666432 2345778899999999999999998753
No 33
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=89.72 E-value=2.5 Score=33.56 Aligned_cols=78 Identities=13% Similarity=0.134 Sum_probs=54.1
Q ss_pred EEEEEEecCcch----HHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHH
Q psy9408 26 EIIAISCGNKKC----KEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLA 101 (219)
Q Consensus 26 ~V~av~~G~~~~----~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA 101 (219)
..++|.||+.+. ++....+-.+|..--+.+-. ..-.|+..-+ +++-.++.++++|++|.. ..+++|+++|
T Consensus 23 p~V~IimGS~SD~~v~~~a~~~L~~~gI~~e~~V~S-AHRtp~~l~~-~~~~a~~~g~~ViIa~AG----~aahLpGvvA 96 (181)
T 4b4k_A 23 SLVGVIMGSTSDWETMKYACDILDELNIPYEKKVVS-AHRTPDYMFE-YAETARERGLKVIIAGAG----GAAHLPGMVA 96 (181)
T ss_dssp CSEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECC-TTTSHHHHHH-HHHHTTTTTCCEEEEEEC----SSCCHHHHHH
T ss_pred ccEEEEECCHhHHHHHHHHHHHHHHcCCCeeEEEEc-cccChHHHHH-HHHHHHhcCceEEEEecc----ccccchhhHH
Confidence 358899998763 34445556699886666552 3456665433 333334467999999973 4688999999
Q ss_pred HHcCCCcc
Q psy9408 102 ALLNWPQA 109 (219)
Q Consensus 102 ~~Lg~p~v 109 (219)
..-..|++
T Consensus 97 a~T~~PVI 104 (181)
T 4b4k_A 97 AKTNLPVI 104 (181)
T ss_dssp TTCCSCEE
T ss_pred hcCCCCEE
Confidence 99999977
No 34
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A*
Probab=89.62 E-value=3.4 Score=33.31 Aligned_cols=96 Identities=16% Similarity=0.137 Sum_probs=61.6
Q ss_pred CHhhHHHHHHHHHhhhhcCCCcEEEEEEecCcc-------------------------------hHHHHHH----HHhCC
Q psy9408 4 NPFDEIAIESAIRLRESSNKIKEIIAISCGNKK-------------------------------CKEILQI----AMAMG 48 (219)
Q Consensus 4 Np~D~~Ale~A~~l~e~~g~g~~V~av~~G~~~-------------------------------~~~~lr~----~~a~G 48 (219)
.+....|++.|.+++... +.+++.+.+-+.. +++.+.+ +...|
T Consensus 10 s~~s~~al~~A~~lA~~~--~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g 87 (268)
T 3ab8_A 10 SPQARGAEALAEWLAYKL--SAPLTVLFVVDTRLARIPELLDFGALTVPVPVLRTELERALALRGEAVLERVRQSALAAG 87 (268)
T ss_dssp CGGGHHHHHHHHHHHHHH--TCCEEEEEEEEHHHHTHHHHC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHh--CCcEEEEEEeccCCcccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 477889999999999987 4688877653211 0111222 33467
Q ss_pred CCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccccC-C----CcCcHHHHHHHHcCCCcc
Q psy9408 49 VDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQSID-S----DNNQTGQMLAALLNWPQA 109 (219)
Q Consensus 49 aD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d-~----~~~~v~~~lA~~Lg~p~v 109 (219)
.+--+.+..+ ++ +..|.+. +.++|+|++|....+ + --|.++-.+.....+|++
T Consensus 88 ~~~~~~~~~g---~~---~~~I~~~--~~~~dliV~G~~g~~~~~~~~~~Gs~~~~v~~~a~~PVl 145 (268)
T 3ab8_A 88 VAVEAVLEEG---VP---HEAILRR--ARAADLLVLGRSGEAHGDGFGGLGSTADRVLRASPVPVL 145 (268)
T ss_dssp CCEEEEEEEE---CH---HHHHHHH--HTTCSEEEEESSCTTSCTTCCSCCHHHHHHHHHCSSCEE
T ss_pred CCeEEEEecC---CH---HHHHHhh--ccCCCEEEEeccCCCccccccccchhHHHHHHhCCCCEE
Confidence 6633333311 22 3566666 679999999987544 2 236688889999898865
No 35
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A*
Probab=87.05 E-value=4.6 Score=33.41 Aligned_cols=96 Identities=13% Similarity=0.062 Sum_probs=61.8
Q ss_pred CHhhHHHHHHHHHhhhhcCCCcEEEEEEecCcc--------------------hHHHHHH----HHhC-----CCCEEEE
Q psy9408 4 NPFDEIAIESAIRLRESSNKIKEIIAISCGNKK--------------------CKEILQI----AMAM-----GVDRAIL 54 (219)
Q Consensus 4 Np~D~~Ale~A~~l~e~~g~g~~V~av~~G~~~--------------------~~~~lr~----~~a~-----GaD~v~~ 54 (219)
.+....||+.|.+++... +.+++.+.+-++. +++.+++ +-.. |.+--+.
T Consensus 29 s~~s~~al~~A~~lA~~~--~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 106 (309)
T 3cis_A 29 SPAAQVAVRWAARDAELR--KIPLTLVHAVSPEVATWLEVPLPPGVLRWQQDHGRHLIDDALKVVEQASLRAGPPTVHSE 106 (309)
T ss_dssp SHHHHHHHHHHHHHHHHH--TCCEEEEEECCCCCCCTTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCSSSCCSCEEEE
T ss_pred CHHHHHHHHHHHHHHHhc--CCcEEEEEEecCcccccccCCCCchhhHHHHHHHHHHHHHHHHHHHHhcccCCCceEEEE
Confidence 467789999999999987 4688887654310 1122222 2222 6654444
Q ss_pred EecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccccCC----CcCcHHHHHHHHcCCCcc
Q psy9408 55 IETDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDS----DNNQTGQMLAALLNWPQA 109 (219)
Q Consensus 55 v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~----~~~~v~~~lA~~Lg~p~v 109 (219)
+.. -++ +..|.+.++ ++|+|++|....++ --|.++-++.....+|++
T Consensus 107 ~~~---g~~---~~~I~~~a~--~~DliV~G~~g~~~~~~~~~Gs~~~~vl~~~~~PVl 157 (309)
T 3cis_A 107 IVP---AAA---VPTLVDMSK--DAVLMVVGCLGSGRWPGRLLGSVSSGLLRHAHCPVV 157 (309)
T ss_dssp EES---SCH---HHHHHHHGG--GEEEEEEESSCTTCCTTCCSCHHHHHHHHHCSSCEE
T ss_pred Eec---CCH---HHHHHHHhc--CCCEEEECCCCCccccccccCcHHHHHHHhCCCCEE
Confidence 442 132 466666665 89999999875543 236688888899898866
No 36
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=86.80 E-value=6.4 Score=30.85 Aligned_cols=77 Identities=12% Similarity=0.090 Sum_probs=54.1
Q ss_pred EEEEEecCcc----hHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHH
Q psy9408 27 IIAISCGNKK----CKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAA 102 (219)
Q Consensus 27 V~av~~G~~~----~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~ 102 (219)
.++|.||+.+ .++....+-.+|..--+.+.. .+-.++..-+.+. -.++.+.++|+++.. ..+++|+.+|.
T Consensus 8 ~V~IimgS~SD~~v~~~a~~~l~~~gi~~ev~V~S-aHR~p~~~~~~~~-~a~~~g~~ViIa~AG----~aa~LpgvvA~ 81 (169)
T 3trh_A 8 FVAILMGSDSDLSTMETAFTELKSLGIPFEAHILS-AHRTPKETVEFVE-NADNRGCAVFIAAAG----LAAHLAGTIAA 81 (169)
T ss_dssp EEEEEESCGGGHHHHHHHHHHHHHTTCCEEEEECC-TTTSHHHHHHHHH-HHHHTTEEEEEEEEC----SSCCHHHHHHH
T ss_pred cEEEEECcHHhHHHHHHHHHHHHHcCCCEEEEEEc-ccCCHHHHHHHHH-HHHhCCCcEEEEECC----hhhhhHHHHHh
Confidence 4678888876 345555666899987666663 3456665555333 334467889998874 45889999999
Q ss_pred HcCCCcc
Q psy9408 103 LLNWPQA 109 (219)
Q Consensus 103 ~Lg~p~v 109 (219)
.-..|+|
T Consensus 82 ~t~~PVI 88 (169)
T 3trh_A 82 HTLKPVI 88 (169)
T ss_dssp TCSSCEE
T ss_pred cCCCCEE
Confidence 9999977
No 37
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=86.58 E-value=3.5 Score=34.14 Aligned_cols=81 Identities=12% Similarity=0.106 Sum_probs=52.9
Q ss_pred hhHHHHHHHHHhhhhcCCCcEEEEEEecCcc-----------------------hHHHHHHH-HhCCCC--EEEEEecCC
Q psy9408 6 FDEIAIESAIRLRESSNKIKEIIAISCGNKK-----------------------CKEILQIA-MAMGVD--RAILIETDT 59 (219)
Q Consensus 6 ~D~~Ale~A~~l~e~~g~g~~V~av~~G~~~-----------------------~~~~lr~~-~a~GaD--~v~~v~~~~ 59 (219)
+...+|+.|.+++....++.+++++.+-+.. +++.++.. -.+|.+ +..+.. +
T Consensus 175 ~s~~al~~a~~la~~~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~-g- 252 (319)
T 3olq_A 175 LNLKLIELTNDLSHRIQKDPDVHLLSAYPVAPINIAIELPDFDPNLYNNALRGQHLIAMKELRQKFSIPEEKTHVKE-G- 252 (319)
T ss_dssp HHHHHHHHHHHHHHHHCSSCCEEEEEEECCCSCSCCTTCTTCCHHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEE-S-
T ss_pred HHHHHHHHHHHHHHhccCCCeEEEEEeecCcchhhhccCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCcccEEEec-C-
Confidence 4588999999999876113688888764321 12333333 356764 233333 1
Q ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEcccccCCCc
Q psy9408 60 ILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDN 93 (219)
Q Consensus 60 ~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~ 93 (219)
++ +..|.+.+++.++|+|++|....++-.
T Consensus 253 --~~---~~~I~~~a~~~~~dLiV~G~~g~~~~~ 281 (319)
T 3olq_A 253 --LP---EQVIPQVCEELNAGIVVLGILGRTGLS 281 (319)
T ss_dssp --CH---HHHHHHHHHHTTEEEEEEECCSCCSTH
T ss_pred --Cc---HHHHHHHHHHhCCCEEEEeccCccCCc
Confidence 33 588899999999999999998655443
No 38
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=85.37 E-value=10 Score=29.83 Aligned_cols=77 Identities=9% Similarity=0.110 Sum_probs=54.2
Q ss_pred EEEEEecCcc----hHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHH
Q psy9408 27 IIAISCGNKK----CKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAA 102 (219)
Q Consensus 27 V~av~~G~~~----~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~ 102 (219)
-++|.||+.+ .++....+-.+|.+--+.+.. .+-.++..-+.+..+ ++.+.++|+++.. ..+++|+.+|.
T Consensus 9 ~V~IimgS~SD~~v~~~a~~~L~~~gi~~ev~V~S-aHR~p~~~~~~~~~a-~~~g~~ViIa~AG----~aa~LpgvvA~ 82 (174)
T 3lp6_A 9 RVGVIMGSDSDWPVMADAAAALAEFDIPAEVRVVS-AHRTPEAMFSYARGA-AARGLEVIIAGAG----GAAHLPGMVAA 82 (174)
T ss_dssp SEEEEESCGGGHHHHHHHHHHHHHTTCCEEEEECC-TTTCHHHHHHHHHHH-HHHTCCEEEEEEE----SSCCHHHHHHH
T ss_pred eEEEEECcHHhHHHHHHHHHHHHHcCCCEEEEEEC-CCCCHHHHHHHHHHH-HhCCCCEEEEecC----chhhhHHHHHh
Confidence 4678888876 345555666899986666653 355666555554443 4457889998875 35889999999
Q ss_pred HcCCCcc
Q psy9408 103 LLNWPQA 109 (219)
Q Consensus 103 ~Lg~p~v 109 (219)
.-..|+|
T Consensus 83 ~t~~PVI 89 (174)
T 3lp6_A 83 ATPLPVI 89 (174)
T ss_dssp HCSSCEE
T ss_pred ccCCCEE
Confidence 9999976
No 39
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=84.63 E-value=0.9 Score=37.54 Aligned_cols=97 Identities=13% Similarity=0.063 Sum_probs=60.4
Q ss_pred CHhhHHHHHHHHHhhhhcCCCcEEEEEEecCcc---------------------hHHHHH----HHHhCCCCEEE-EEec
Q psy9408 4 NPFDEIAIESAIRLRESSNKIKEIIAISCGNKK---------------------CKEILQ----IAMAMGVDRAI-LIET 57 (219)
Q Consensus 4 Np~D~~Ale~A~~l~e~~g~g~~V~av~~G~~~---------------------~~~~lr----~~~a~GaD~v~-~v~~ 57 (219)
.+....|++.|.+|++.. +.+++++.+-+.. +++.++ .+...|.+--. .+.
T Consensus 32 s~~s~~al~~A~~lA~~~--~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~v~- 108 (294)
T 3loq_A 32 SENSFKVLEYLGDFKKVG--VEEIGVLFVINLTKLSTVSGGIDIDHYIDEMSEKAEEVLPEVAQKIEAAGIKAEVIKPF- 108 (294)
T ss_dssp CTGGGGGGGGHHHHHHTT--CCEEEEECCEECTTC-----CCCTTHHHHHHHHHHHHHHHHHHHHHHHTTCEEEECSSC-
T ss_pred CHHHHHHHHHHHHHHhhc--CCEEEEEEEecCcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceeEee-
Confidence 466788999999999886 4789888764321 122222 33345665333 121
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCC----cCcHHHHHHHHcCCCcc
Q psy9408 58 DTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSD----NNQTGQMLAALLNWPQA 109 (219)
Q Consensus 58 ~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~----~~~v~~~lA~~Lg~p~v 109 (219)
...++ +..| .+++.++|+|++|....++- -|.++-.+.....+|++
T Consensus 109 -~~g~~---~~~I--~a~~~~~DliV~G~~g~~~~~~~~~Gs~~~~vl~~~~~PVl 158 (294)
T 3loq_A 109 -PAGDP---VVEI--IKASENYSFIAMGSRGASKFKKILLGSVSEGVLHDSKVPVY 158 (294)
T ss_dssp -CEECH---HHHH--HHHHTTSSEEEEECCCCCHHHHHHHCCHHHHHHHHCSSCEE
T ss_pred -ccCCh---hHhe--eeccCCCCEEEEcCCCCccccceeeccHHHHHHhcCCCCEE
Confidence 01122 3555 77788999999998754321 14567788888888855
No 40
>1q74_A 1D-MYO-inosityl 2-acetamido-2-deoxy-alpha-D- glucopyranoside deacetylase (MSHB); rossmann fold, zinc aminohydrolase; HET: PE4; 1.70A {Mycobacterium tuberculosis} SCOP: c.134.1.1 PDB: 1q7t_A*
Probab=84.43 E-value=4.3 Score=34.44 Aligned_cols=48 Identities=21% Similarity=0.297 Sum_probs=35.1
Q ss_pred HHHHHHHHhCCCCEEEEEe----c-CCCC--------------CHHHHHHHHHHHHHhcCCCEEEEc
Q psy9408 38 KEILQIAMAMGVDRAILIE----T-DTIL--------------QSLSVAKLLQVIVKKENPQLVILG 85 (219)
Q Consensus 38 ~~~lr~~~a~GaD~v~~v~----~-~~~~--------------d~~~~A~~la~~ik~~~~dlVl~G 85 (219)
+|..+.+..+|++..+++. - |..+ +.+.....|+++|++.+||+|++-
T Consensus 70 ~E~~~A~~~LGv~~~~~L~~~~~~~D~~l~~~~~~~~p~~~~~~~~~~~~~l~~~ir~~rP~vV~t~ 136 (303)
T 1q74_A 70 GELTAALRALGVSAPIYLGGAGRWRDSGMAGTDQRSQRRFVDADPRQTVGALVAIIRELRPHVVVTY 136 (303)
T ss_dssp HHHHHHHHHTTCCCCEETTSTTSSBCCCCC----CCSCBGGGSCHHHHHHHHHHHHHHHCCSEEEEE
T ss_pred HHHHHHHHHhCCCeeEECCCCCcCCCCCCCCCccccCcccccCCHHHHHHHHHHHHHHcCCCEEEEc
Confidence 3455566678998866654 1 2222 567899999999999999999973
No 41
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=84.23 E-value=8.7 Score=30.42 Aligned_cols=77 Identities=14% Similarity=0.192 Sum_probs=51.8
Q ss_pred EEEEEecCcc----hHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHH
Q psy9408 27 IIAISCGNKK----CKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAA 102 (219)
Q Consensus 27 V~av~~G~~~----~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~ 102 (219)
-++|.||+.+ .++....+-.+|.+--+.+.. .+-.++..-+.+. -.++.+.++|+++.. ..+++|+.+|.
T Consensus 23 ~V~IimGS~SD~~v~~~a~~~L~~~Gi~~dv~V~S-aHR~p~~l~~~~~-~a~~~g~~ViIa~AG----~aa~LpgvvA~ 96 (182)
T 1u11_A 23 VVGIIMGSQSDWETMRHADALLTELEIPHETLIVS-AHRTPDRLADYAR-TAAERGLNVIIAGAG----GAAHLPGMCAA 96 (182)
T ss_dssp SEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECC-TTTCHHHHHHHHH-HTTTTTCCEEEEEEE----SSCCHHHHHHH
T ss_pred EEEEEECcHHHHHHHHHHHHHHHHcCCCeEEEEEc-ccCCHHHHHHHHH-HHHhCCCcEEEEecC----chhhhHHHHHh
Confidence 4678888765 345556667899986666653 2445554433222 222346889998874 35889999999
Q ss_pred HcCCCcc
Q psy9408 103 LLNWPQA 109 (219)
Q Consensus 103 ~Lg~p~v 109 (219)
.-..|+|
T Consensus 97 ~t~~PVI 103 (182)
T 1u11_A 97 WTRLPVL 103 (182)
T ss_dssp HCSSCEE
T ss_pred ccCCCEE
Confidence 9999977
No 42
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=84.18 E-value=8.2 Score=30.59 Aligned_cols=78 Identities=17% Similarity=0.237 Sum_probs=53.9
Q ss_pred EEEEEEecCcc----hHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHH
Q psy9408 26 EIIAISCGNKK----CKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLA 101 (219)
Q Consensus 26 ~V~av~~G~~~----~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA 101 (219)
..++|.||+.+ +++....+-.+|.+--+.+.. ..-.++...+.+.+ .++.+.++|+++.. ..+.+|+.+|
T Consensus 14 ~~V~IimGS~SD~~v~~~a~~~L~~~Gi~~dv~V~S-aHR~p~~l~~~~~~-a~~~g~~ViIa~AG----~aa~LpgvvA 87 (183)
T 1o4v_A 14 PRVGIIMGSDSDLPVMKQAAEILEEFGIDYEITIVS-AHRTPDRMFEYAKN-AEERGIEVIIAGAG----GAAHLPGMVA 87 (183)
T ss_dssp CEEEEEESCGGGHHHHHHHHHHHHHTTCEEEEEECC-TTTCHHHHHHHHHH-TTTTTCCEEEEEEE----SSCCHHHHHH
T ss_pred CeEEEEeccHHHHHHHHHHHHHHHHcCCCeEEEEEc-ccCCHHHHHHHHHH-HHhCCCcEEEEecC----cccccHHHHH
Confidence 46889999876 345556677899986666653 24455554333332 23356889998875 3578999999
Q ss_pred HHcCCCcc
Q psy9408 102 ALLNWPQA 109 (219)
Q Consensus 102 ~~Lg~p~v 109 (219)
..-..|+|
T Consensus 88 ~~t~~PVI 95 (183)
T 1o4v_A 88 SITHLPVI 95 (183)
T ss_dssp HHCSSCEE
T ss_pred hccCCCEE
Confidence 99999977
No 43
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=84.01 E-value=7.6 Score=30.22 Aligned_cols=76 Identities=12% Similarity=0.160 Sum_probs=51.5
Q ss_pred EEEEecCcc----hHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHH
Q psy9408 28 IAISCGNKK----CKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAAL 103 (219)
Q Consensus 28 ~av~~G~~~----~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~ 103 (219)
++|.||+.+ .++....+-.+|..--+.+.. .+-.++..-+.+ +-.++.+.++|+++.. ..+++|+.+|..
T Consensus 6 V~Iimgs~SD~~v~~~a~~~l~~~gi~~ev~V~S-aHR~p~~~~~~~-~~a~~~g~~ViIa~AG----~aa~LpgvvA~~ 79 (163)
T 3ors_A 6 VAVIMGSSSDWKIMQESCNMLDYFEIPYEKQVVS-AHRTPKMMVQFA-SEARERGINIIIAGAG----GAAHLPGMVASL 79 (163)
T ss_dssp EEEEESCGGGHHHHHHHHHHHHHTTCCEEEEECC-TTTSHHHHHHHH-HHTTTTTCCEEEEEEE----SSCCHHHHHHHH
T ss_pred EEEEECcHHHHHHHHHHHHHHHHcCCCEEEEEEC-CcCCHHHHHHHH-HHHHhCCCcEEEEECC----chhhhHHHHHhc
Confidence 677888776 344555566899986666653 244555444332 2233456889998875 358899999999
Q ss_pred cCCCcc
Q psy9408 104 LNWPQA 109 (219)
Q Consensus 104 Lg~p~v 109 (219)
-..|+|
T Consensus 80 t~~PVI 85 (163)
T 3ors_A 80 TTLPVI 85 (163)
T ss_dssp CSSCEE
T ss_pred cCCCEE
Confidence 999976
No 44
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=83.45 E-value=9.6 Score=29.74 Aligned_cols=78 Identities=17% Similarity=0.185 Sum_probs=53.1
Q ss_pred EEEEEEecCcc----hHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHH
Q psy9408 26 EIIAISCGNKK----CKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLA 101 (219)
Q Consensus 26 ~V~av~~G~~~----~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA 101 (219)
.-++|.||+.+ .++....+-.+|..--+.+.. ..-.|+..-+.+..+ ++.+.++|+++.. ..+++|+.+|
T Consensus 6 p~V~IimgS~SD~~v~~~a~~~l~~~gi~~ev~V~S-aHRtp~~l~~~~~~~-~~~g~~ViIa~AG----~aa~LpgvvA 79 (166)
T 3oow_A 6 VQVGVIMGSKSDWSTMKECCDILDNLGIGYECEVVS-AHRTPDKMFDYAETA-KERGLKVIIAGAG----GAAHLPGMVA 79 (166)
T ss_dssp EEEEEEESSGGGHHHHHHHHHHHHHTTCEEEEEECC-TTTCHHHHHHHHHHT-TTTTCCEEEEEEC----SSCCHHHHHH
T ss_pred CeEEEEECcHHhHHHHHHHHHHHHHcCCCEEEEEEc-CcCCHHHHHHHHHHH-HhCCCcEEEEECC----cchhhHHHHH
Confidence 35788899876 344555566899876666553 345565544443332 3346899998874 4588999999
Q ss_pred HHcCCCcc
Q psy9408 102 ALLNWPQA 109 (219)
Q Consensus 102 ~~Lg~p~v 109 (219)
..-..|+|
T Consensus 80 ~~t~~PVI 87 (166)
T 3oow_A 80 AKTTLPVL 87 (166)
T ss_dssp HTCSSCEE
T ss_pred hccCCCEE
Confidence 99999976
No 45
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=82.36 E-value=6.7 Score=35.70 Aligned_cols=33 Identities=15% Similarity=0.214 Sum_probs=25.5
Q ss_pred HHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCccc
Q psy9408 69 LLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQAT 110 (219)
Q Consensus 69 ~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt 110 (219)
.+.+.+++.+||+++.+ +..-.+|.++|+|++-
T Consensus 363 el~~~i~~~~pDl~ig~---------~~~r~~a~k~gip~~~ 395 (511)
T 2xdq_B 363 VVGDAIARVEPAAIFGT---------QMERHVGKRLNIPCGV 395 (511)
T ss_dssp HHHHHHHHHCCSEEEEC---------HHHHHHHHHHTCCEEE
T ss_pred HHHHHHHhcCCCEEEec---------cchHHHHHhcCCCeEe
Confidence 56678888899999843 2566778999999863
No 46
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=82.31 E-value=11 Score=33.69 Aligned_cols=78 Identities=9% Similarity=0.184 Sum_probs=54.5
Q ss_pred EEEEEEecCcc----hHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCC-CEEEEcccccCCCcCcHHHHH
Q psy9408 26 EIIAISCGNKK----CKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENP-QLVILGKQSIDSDNNQTGQML 100 (219)
Q Consensus 26 ~V~av~~G~~~----~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~-dlVl~G~~s~d~~~~~v~~~l 100 (219)
..++|.||+.+ ++++...+-.+|..--+.|.. .+-.+....+...++ ++.+. ++|+++.. -.+++|+.+
T Consensus 266 ~~V~Ii~gs~SD~~~~~~a~~~l~~~gi~~~v~V~s-aHR~p~~~~~~~~~~-~~~g~~~viIa~AG----~~a~Lpgvv 339 (425)
T 2h31_A 266 CRVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTS-AHKGPDETLRIKAEY-EGDGIPTVFVAVAG----RSNGLGPVM 339 (425)
T ss_dssp CEEEEEESCGGGHHHHHHHHHHHHHTTCCEEEEECC-TTTCHHHHHHHHHHH-HTTCCCEEEEEECC----SSCCHHHHH
T ss_pred CeEEEEecCcccHHHHHHHHHHHHHcCCceEEeeee-ccCCHHHHHHHHHHH-HHCCCCeEEEEEcC----cccchHhHH
Confidence 35778888875 455666677899986666653 355666554444433 34456 68888874 358899999
Q ss_pred HHHcCCCcc
Q psy9408 101 AALLNWPQA 109 (219)
Q Consensus 101 A~~Lg~p~v 109 (219)
|..-..|++
T Consensus 340 a~~t~~PVI 348 (425)
T 2h31_A 340 SGNTAYPVI 348 (425)
T ss_dssp HHHCSSCEE
T ss_pred hccCCCCEE
Confidence 999999987
No 47
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=82.15 E-value=8.8 Score=30.07 Aligned_cols=77 Identities=13% Similarity=0.144 Sum_probs=51.7
Q ss_pred EEEEEecCcc----hHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHH
Q psy9408 27 IIAISCGNKK----CKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAA 102 (219)
Q Consensus 27 V~av~~G~~~----~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~ 102 (219)
.++|.||+.+ .++....+-.+|.+--+.+.. ..-.++..-+. ++-.++.+.++|+++.. ..+.+|+.+|.
T Consensus 13 ~V~IimGS~SD~~v~~~a~~~L~~~Gi~~dv~V~S-aHR~p~~l~~~-~~~a~~~g~~ViIa~AG----~aa~LpgvvA~ 86 (170)
T 1xmp_A 13 LVGVIMGSTSDWETMKYACDILDELNIPYEKKVVS-AHRTPDYMFEY-AETARERGLKVIIAGAG----GAAHLPGMVAA 86 (170)
T ss_dssp SEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECC-TTTSHHHHHHH-HHHTTTTTCCEEEEEEE----SSCCHHHHHHT
T ss_pred cEEEEECcHHHHHHHHHHHHHHHHcCCCEEEEEEe-ccCCHHHHHHH-HHHHHhCCCcEEEEECC----chhhhHHHHHh
Confidence 4778899876 345555667899986666653 24455544332 22223346889988875 35789999999
Q ss_pred HcCCCcc
Q psy9408 103 LLNWPQA 109 (219)
Q Consensus 103 ~Lg~p~v 109 (219)
.-..|+|
T Consensus 87 ~t~~PVI 93 (170)
T 1xmp_A 87 KTNLPVI 93 (170)
T ss_dssp TCCSCEE
T ss_pred ccCCCEE
Confidence 9999977
No 48
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=81.61 E-value=7.1 Score=34.05 Aligned_cols=44 Identities=11% Similarity=-0.063 Sum_probs=33.9
Q ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCc
Q psy9408 61 LQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQ 108 (219)
Q Consensus 61 ~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~ 108 (219)
.|.+.+...+.++.++.++|.|+.+... .-..++++|++||+|.
T Consensus 58 ~d~~~~~~~~~~~~~~~~id~V~~~~e~----~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 58 EDEEAAMDVVRQTFVEFPFDGVMTLFEP----ALPFTAKAAEALNLPG 101 (425)
T ss_dssp TCHHHHHHHHHHHHHHSCCSEEECCCGG----GHHHHHHHHHHTTCSS
T ss_pred CCHHHHHHHHHHhhhhcCCCEEEECCch----hHHHHHHHHHHcCCCC
Confidence 3678888899999999999999876432 2346678888888874
No 49
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=81.35 E-value=5 Score=36.85 Aligned_cols=36 Identities=14% Similarity=0.156 Sum_probs=23.9
Q ss_pred HHHHHHHhcCCCEEEEcccccCCCcCcHHHHH---HHHcCCCcc
Q psy9408 69 LLQVIVKKENPQLVILGKQSIDSDNNQTGQML---AALLNWPQA 109 (219)
Q Consensus 69 ~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~l---A~~Lg~p~v 109 (219)
.+.+.+++.+||+++.+.. ++.++-.+ |.+||+|++
T Consensus 429 ~l~~~i~~~~pDLlig~s~-----~k~~a~~~~~~~~~~giP~i 467 (523)
T 3u7q_B 429 HLRSLVFTDKPDFMIGNSY-----GKFIQRDTLHKGKEFEVPLI 467 (523)
T ss_dssp HHHHHHHHTCCSEEEECTT-----HHHHHHHHHHHCGGGCCCEE
T ss_pred HHHHHHHhcCCCEEEECcc-----HHHHHHHhhcccccCCCceE
Confidence 4556777889999997653 23344433 555599986
No 50
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=81.19 E-value=12 Score=29.36 Aligned_cols=77 Identities=17% Similarity=0.146 Sum_probs=52.8
Q ss_pred EEEEEecCcc----hHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHH
Q psy9408 27 IIAISCGNKK----CKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAA 102 (219)
Q Consensus 27 V~av~~G~~~----~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~ 102 (219)
-++|.||+.+ .++....+-.+|..--+.+.. .+-.++..-+.+. -.++.+.++|+++.. ..+++|+.+|.
T Consensus 14 ~V~IimGS~SD~~v~~~a~~~L~~~Gi~~ev~V~S-aHR~p~~~~~~~~-~a~~~g~~ViIa~AG----~aa~LpgvvA~ 87 (174)
T 3kuu_A 14 KIAIVMGSKSDWATMQFAADVLTTLNVPFHVEVVS-AHRTPDRLFSFAE-QAEANGLHVIIAGNG----GAAHLPGMLAA 87 (174)
T ss_dssp CEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECC-TTTCHHHHHHHHH-HTTTTTCSEEEEEEE----SSCCHHHHHHH
T ss_pred cEEEEECcHHHHHHHHHHHHHHHHcCCCEEEEEEc-ccCCHHHHHHHHH-HHHhCCCcEEEEECC----hhhhhHHHHHh
Confidence 4678888876 344555666899987666653 3445554444332 223457889998875 35889999999
Q ss_pred HcCCCcc
Q psy9408 103 LLNWPQA 109 (219)
Q Consensus 103 ~Lg~p~v 109 (219)
.-..|+|
T Consensus 88 ~t~~PVI 94 (174)
T 3kuu_A 88 KTLVPVL 94 (174)
T ss_dssp TCSSCEE
T ss_pred ccCCCEE
Confidence 9999977
No 51
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=80.72 E-value=17 Score=30.77 Aligned_cols=38 Identities=24% Similarity=0.304 Sum_probs=28.0
Q ss_pred HHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcccce
Q psy9408 69 LLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFA 112 (219)
Q Consensus 69 ~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v 112 (219)
.+.+++++.+||+|++.. ..-.+..+|.++|+|++...
T Consensus 114 ~l~~~~~~~~pDlVv~d~------~~~~~~~~a~~~giP~v~~~ 151 (398)
T 4fzr_A 114 EALALAERWKPDLVLTET------YSLTGPLVAATLGIPWIEQS 151 (398)
T ss_dssp HHHHHHHHHCCSEEEEET------TCTHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHhCCCCEEEECc------cccHHHHHHHhhCCCEEEec
Confidence 566677888999998543 13357788889999988654
No 52
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=80.14 E-value=9.9 Score=32.42 Aligned_cols=89 Identities=18% Similarity=0.237 Sum_probs=52.0
Q ss_pred HHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCC-CCC---------------------HHHHH
Q psy9408 10 AIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDT-ILQ---------------------SLSVA 67 (219)
Q Consensus 10 Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~-~~d---------------------~~~~A 67 (219)
.+..|..|+++ |.+|+.++-+ ...+.+ -..|++- +.+..+- ..+ .....
T Consensus 37 ~l~La~~L~~~---Gh~V~v~~~~--~~~~~~---~~~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (415)
T 3rsc_A 37 TLTVVTELVRR---GHRVSYVTAG--GFAEPV---RAAGATV-VPYQSEIIDADAAEVFGSDDLGVRPHLMYLRENVSVL 107 (415)
T ss_dssp GHHHHHHHHHT---TCEEEEEECG--GGHHHH---HHTTCEE-EECCCSTTTCCHHHHHHSSSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHC---CCEEEEEeCH--HHHHHH---HhcCCEE-EeccccccccccchhhccccHHHHHHHHHHHHHHHHH
Confidence 35667777765 4789888733 233333 3457653 3333211 111 01223
Q ss_pred HHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcccce
Q psy9408 68 KLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFA 112 (219)
Q Consensus 68 ~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v 112 (219)
..+.+++++.+||+|++... ..-.+..+|.++|+|++...
T Consensus 108 ~~l~~~l~~~~PDlVi~d~~-----~~~~~~~aA~~~giP~v~~~ 147 (415)
T 3rsc_A 108 RATAEALDGDVPDLVLYDDF-----PFIAGQLLAARWRRPAVRLS 147 (415)
T ss_dssp HHHHHHHSSSCCSEEEEEST-----THHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHhccCCCEEEECch-----hhhHHHHHHHHhCCCEEEEE
Confidence 45566677789999997421 12357788999999998765
No 53
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=78.70 E-value=24 Score=30.20 Aligned_cols=64 Identities=14% Similarity=0.193 Sum_probs=42.9
Q ss_pred hHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcccccCCCcCcHHHHHHHH
Q psy9408 37 CKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGKQSIDSDNNQTGQMLAAL 103 (219)
Q Consensus 37 ~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~~s~d~~~~~v~~~lA~~ 103 (219)
..+.++.+..+|+|.+.+.+.-....|..+.+.+..+.+.. +..+=+=.+.. .+-.++-.+|+.
T Consensus 171 ~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~p~~~i~~H~Hnd---~GlA~AN~laAv 235 (337)
T 3ble_A 171 VKSLVEHLSKEHIERIFLPDTLGVLSPEETFQGVDSLIQKYPDIHFEFHGHND---YDLSVANSLQAI 235 (337)
T ss_dssp HHHHHHHHHTSCCSEEEEECTTCCCCHHHHHHHHHHHHHHCTTSCEEEECBCT---TSCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEecCCCCcCHHHHHHHHHHHHHhcCCCeEEEEecCC---cchHHHHHHHHH
Confidence 34578889999999888876544679999999999888776 33333333333 334455555543
No 54
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=77.59 E-value=11 Score=31.90 Aligned_cols=40 Identities=15% Similarity=0.252 Sum_probs=29.6
Q ss_pred HHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcccce
Q psy9408 67 AKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFA 112 (219)
Q Consensus 67 A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v 112 (219)
...+.+++++.+||+|++-. ..-.+...|.++|+|++...
T Consensus 103 ~~~l~~~l~~~~PD~Vv~~~------~~~~~~~aa~~~giP~v~~~ 142 (391)
T 3tsa_A 103 LPEYLRLAEAWRPSVLLVDV------CALIGRVLGGLLDLPVVLHR 142 (391)
T ss_dssp HHHHHHHHHHHCCSEEEEET------TCHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHhcCCCEEEeCc------chhHHHHHHHHhCCCEEEEe
Confidence 44567778888999999842 23456778889999988764
No 55
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=75.74 E-value=16 Score=30.63 Aligned_cols=90 Identities=14% Similarity=0.183 Sum_probs=53.3
Q ss_pred HHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCC----------CCCHH------------HH
Q psy9408 9 IAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDT----------ILQSL------------SV 66 (219)
Q Consensus 9 ~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~----------~~d~~------------~~ 66 (219)
..+..|..|+++ |.+|+.++-+ . .....-..|+.- +.+..+- ..++. ..
T Consensus 20 ~~~~La~~L~~~---GheV~v~~~~--~---~~~~~~~~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (402)
T 3ia7_A 20 PSLGLVSELARR---GHRITYVTTP--L---FADEVKAAGAEV-VLYKSEFDTFHVPEVVKQEDAETQLHLVYVRENVAI 90 (402)
T ss_dssp HHHHHHHHHHHT---TCEEEEEECH--H---HHHHHHHTTCEE-EECCCGGGTSSSSSSSCCTTHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhC---CCEEEEEcCH--H---HHHHHHHcCCEE-EecccccccccccccccccchHHHHHHHHHHHHHHH
Confidence 356777888775 4789887732 2 233344567653 3333210 00111 12
Q ss_pred HHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcccce
Q psy9408 67 AKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFA 112 (219)
Q Consensus 67 A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v 112 (219)
...+.+.+++.+||+|++... ..-.+..+|.++|+|++...
T Consensus 91 ~~~l~~~l~~~~pD~Vi~d~~-----~~~~~~~aA~~~giP~v~~~ 131 (402)
T 3ia7_A 91 LRAAEEALGDNPPDLVVYDVF-----PFIAGRLLAARWDRPAVRLT 131 (402)
T ss_dssp HHHHHHHHTTCCCSEEEEEST-----THHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHhccCCCEEEECch-----HHHHHHHHHHhhCCCEEEEe
Confidence 345566777789999997421 23367888999999988764
No 56
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=75.70 E-value=23 Score=27.30 Aligned_cols=73 Identities=18% Similarity=0.219 Sum_probs=50.6
Q ss_pred EEEEecCcc----hHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHH
Q psy9408 28 IAISCGNKK----CKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAAL 103 (219)
Q Consensus 28 ~av~~G~~~----~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~ 103 (219)
++|.||+.+ .++....+-.+|.+.=+.+.. .+-.++. +.+++++...++|+++.. ..+++|+.+|..
T Consensus 2 V~Iimgs~SD~~v~~~a~~~l~~~gi~~dv~V~s-aHR~p~~----~~~~~~~a~~~ViIa~AG----~aa~Lpgvva~~ 72 (157)
T 2ywx_A 2 ICIIMGSESDLKIAEKAVNILKEFGVEFEVRVAS-AHRTPEL----VEEIVKNSKADVFIAIAG----LAAHLPGVVASL 72 (157)
T ss_dssp EEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECC-TTTCHHH----HHHHHHHCCCSEEEEEEE----SSCCHHHHHHTT
T ss_pred EEEEEccHHHHHHHHHHHHHHHHcCCCeEEEEEc-ccCCHHH----HHHHHHhcCCCEEEEEcC----chhhhHHHHHhc
Confidence 578888875 345556677899986555552 2445543 345555444488888874 358899999999
Q ss_pred cCCCcc
Q psy9408 104 LNWPQA 109 (219)
Q Consensus 104 Lg~p~v 109 (219)
-..|++
T Consensus 73 t~~PVI 78 (157)
T 2ywx_A 73 TTKPVI 78 (157)
T ss_dssp CSSCEE
T ss_pred cCCCEE
Confidence 999987
No 57
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=75.19 E-value=16 Score=29.49 Aligned_cols=70 Identities=17% Similarity=0.081 Sum_probs=48.7
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEE
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVIL 84 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~ 84 (219)
.+.|++|+++ |.+|+.........++..+.+-..|-.+++.+..| -.|.+.+.+.+.++.++. ..|+++.
T Consensus 22 ~aiA~~la~~---Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~D-v~~~~~v~~~~~~~~~~~G~iD~lvn 92 (256)
T 4fs3_A 22 FGVAKVLDQL---GAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQID-VQSDEEVINGFEQIGKDVGNIDGVYH 92 (256)
T ss_dssp HHHHHHHHHT---TCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECC-TTCHHHHHHHHHHHHHHHCCCSEEEE
T ss_pred HHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEcc-CCCHHHHHHHHHHHHHHhCCCCEEEe
Confidence 4567788875 47887776665544555555556676667666644 568888888888888886 4898874
No 58
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=74.60 E-value=19 Score=30.82 Aligned_cols=88 Identities=11% Similarity=0.125 Sum_probs=51.5
Q ss_pred HHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecC--CC-------C-CHH-----------HHHH
Q psy9408 10 AIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETD--TI-------L-QSL-----------SVAK 68 (219)
Q Consensus 10 Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~--~~-------~-d~~-----------~~A~ 68 (219)
.+..|.+|+++ |.+|+.++-.. ..+.++ +.|++- +-+.++ .. . +.. ....
T Consensus 29 ~l~la~~L~~~---Gh~V~~~~~~~--~~~~~~---~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (424)
T 2iya_A 29 SLGIVQELVAR---GHRVSYAITDE--FAAQVK---AAGATP-VVYDSILPKESNPEESWPEDQESAMGLFLDEAVRVLP 99 (424)
T ss_dssp HHHHHHHHHHT---TCEEEEEECGG--GHHHHH---HHTCEE-EECCCCSCCTTCTTCCCCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHC---CCeEEEEeCHH--HHHHHH---hCCCEE-EecCccccccccchhhcchhHHHHHHHHHHHHHHHHH
Confidence 46778888875 47888776443 233333 347643 333322 11 0 111 1223
Q ss_pred HHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcccce
Q psy9408 69 LLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFA 112 (219)
Q Consensus 69 ~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v 112 (219)
.+.+++++.+||+|++-... ..+..+|+++|+|++...
T Consensus 100 ~l~~~l~~~~pD~VI~d~~~------~~~~~~A~~lgIP~v~~~ 137 (424)
T 2iya_A 100 QLEDAYADDRPDLIVYDIAS------WPAPVLGRKWDIPFVQLS 137 (424)
T ss_dssp HHHHHTTTSCCSEEEEETTC------THHHHHHHHHTCCEEEEE
T ss_pred HHHHHHhccCCCEEEEcCcc------cHHHHHHHhcCCCEEEEe
Confidence 34455566789999975432 267889999999988654
No 59
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=73.69 E-value=12 Score=34.26 Aligned_cols=32 Identities=19% Similarity=0.303 Sum_probs=24.8
Q ss_pred HHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcc
Q psy9408 69 LLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQA 109 (219)
Q Consensus 69 ~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~v 109 (219)
.+.+.+++.+||+++.+. -.-.+|.++|+|++
T Consensus 340 el~~~i~~~~pDL~ig~~---------~~~~~a~~~giP~~ 371 (525)
T 3aek_B 340 EVEKAIEAAAPELILGTQ---------MERNIAKKLGLPCA 371 (525)
T ss_dssp HHHHHHHHHCCSEEEECH---------HHHHHHHHHTCCEE
T ss_pred HHHHHHhhcCCCEEEecc---------hhHHHHHHcCCCEE
Confidence 466788888999999433 45667889999986
No 60
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=72.92 E-value=27 Score=32.21 Aligned_cols=94 Identities=12% Similarity=0.092 Sum_probs=56.4
Q ss_pred HHHHHHHhhhhcCCCcEEE-EEEe--cCc----chHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEE
Q psy9408 10 AIESAIRLRESSNKIKEII-AISC--GNK----KCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLV 82 (219)
Q Consensus 10 Ale~A~~l~e~~g~g~~V~-av~~--G~~----~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlV 82 (219)
.+..+.+.+.+. |.+|. .+++ |+. ...+.++.+..+|+|.+.+.+.-....|..+.+.+..+.++..+++.
T Consensus 145 ni~~~i~~ak~~--G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~i~ 222 (539)
T 1rqb_A 145 NMAHAMAAVKKA--GKHAQGTICYTISPVHTVEGYVKLAGQLLDMGADSIALKDMAALLKPQPAYDIIKAIKDTYGQKTQ 222 (539)
T ss_dssp HHHHHHHHHHHT--TCEEEEEEECCCSTTCCHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHHCTTCC
T ss_pred HHHHHHHHHHHC--CCeEEEEEEeeeCCCCCHHHHHHHHHHHHHcCCCEEEeCCCCCCcCHHHHHHHHHHHHHhcCCCce
Confidence 345555555555 35653 3322 322 24567888999999987776654467899999999888877643444
Q ss_pred EEcccccCCCcCcHHHHHHH-HcCC
Q psy9408 83 ILGKQSIDSDNNQTGQMLAA-LLNW 106 (219)
Q Consensus 83 l~G~~s~d~~~~~v~~~lA~-~Lg~ 106 (219)
|-=+.- +..+-.++-.+|+ ..|+
T Consensus 223 I~~H~H-nd~GlAvAN~laAveAGa 246 (539)
T 1rqb_A 223 INLHCH-STTGVTEVSLMKAIEAGV 246 (539)
T ss_dssp EEEEEB-CTTSCHHHHHHHHHHTTC
T ss_pred EEEEeC-CCCChHHHHHHHHHHhCC
Confidence 433333 3334455555554 4444
No 61
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=72.72 E-value=31 Score=26.75 Aligned_cols=82 Identities=15% Similarity=0.033 Sum_probs=52.1
Q ss_pred cEEEEEEecCcc---------hHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEE-cccccCCCcC
Q psy9408 25 KEIIAISCGNKK---------CKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVIL-GKQSIDSDNN 94 (219)
Q Consensus 25 ~~V~av~~G~~~---------~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~-G~~s~d~~~~ 94 (219)
-++..++.|.+- ..-..+.+..+|++-..+.-- .-|.+.+.++|.+++++ +|+|++ |.++.+ ..-
T Consensus 4 ~~v~IistGdEll~G~i~DtN~~~l~~~L~~~G~~v~~~~iv--~Dd~~~I~~~l~~a~~~--~DlVittGG~g~~-~~D 78 (172)
T 3kbq_A 4 KNASVITVGNEILKGRTVNTNAAFIGNFLTYHGYQVRRGFVV--MDDLDEIGWAFRVALEV--SDLVVSSGGLGPT-FDD 78 (172)
T ss_dssp CEEEEEEECHHHHTTSSCCHHHHHHHHHHHHTTCEEEEEEEE--CSCHHHHHHHHHHHHHH--CSEEEEESCCSSS-TTC
T ss_pred CEEEEEEEcccccCCcEEeHHHHHHHHHHHHCCCEEEEEEEe--CCCHHHHHHHHHHHHhc--CCEEEEcCCCcCC-ccc
Confidence 367888888641 112334566789865433211 12567888888888765 787764 555544 435
Q ss_pred cHHHHHHHHcCCCcccc
Q psy9408 95 QTGQMLAALLNWPQATF 111 (219)
Q Consensus 95 ~v~~~lA~~Lg~p~vt~ 111 (219)
.+...++..+|.++.-+
T Consensus 79 ~T~ea~a~~~~~~l~~~ 95 (172)
T 3kbq_A 79 MTVEGFAKCIGQDLRID 95 (172)
T ss_dssp CHHHHHHHHHTCCCEEC
T ss_pred chHHHHHHHcCCCeeeC
Confidence 67788888999887644
No 62
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=71.62 E-value=22 Score=28.65 Aligned_cols=73 Identities=11% Similarity=0.051 Sum_probs=49.5
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEccc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGKQ 87 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~~ 87 (219)
.+.|++|+++ |.+|+.+.-.....++..+++...|..++..+..| -.|...+.+++.++.++. ++|+++.-..
T Consensus 24 ~aia~~l~~~---G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D-v~~~~~v~~~~~~~~~~~g~id~lvnnAg 97 (262)
T 3pk0_A 24 RGIATVFARA---GANVAVAGRSTADIDACVADLDQLGSGKVIGVQTD-VSDRAQCDALAGRAVEEFGGIDVVCANAG 97 (262)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECC-TTSHHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred HHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcC-CCCHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence 3567778775 46887766555444555666666675667766644 567888888888888776 5898886543
No 63
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=71.27 E-value=24 Score=29.17 Aligned_cols=73 Identities=11% Similarity=0.058 Sum_probs=49.5
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEccc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGKQ 87 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~~ 87 (219)
...|++|+++ |.+|+.+.-.....++...++...|..++..+..| -.|...+.+++.++.++. ..|+++.-..
T Consensus 55 ~aia~~la~~---G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D-v~d~~~v~~~~~~~~~~~g~iD~lvnnAg 128 (293)
T 3rih_A 55 RGIATVFARA---GANVAVAARSPRELSSVTAELGELGAGNVIGVRLD-VSDPGSCADAARTVVDAFGALDVVCANAG 128 (293)
T ss_dssp HHHHHHHHHT---TCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEe-CCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 3456777765 46777776665555666666666676667666644 567888888888887776 5798886543
No 64
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=70.71 E-value=31 Score=29.44 Aligned_cols=88 Identities=14% Similarity=0.098 Sum_probs=51.8
Q ss_pred HHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCC--CC--------C-----------HHHHHH
Q psy9408 10 AIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDT--IL--------Q-----------SLSVAK 68 (219)
Q Consensus 10 Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~--~~--------d-----------~~~~A~ 68 (219)
++..|..|+++ |.+|+.++-+.. .+. ....|++- +.+.... .+ + ......
T Consensus 24 ~~~la~~L~~~---G~~V~~~~~~~~--~~~---~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (430)
T 2iyf_A 24 SLEVIRELVAR---GHRVTYAIPPVF--ADK---VAATGPRP-VLYHSTLPGPDADPEAWGSTLLDNVEPFLNDAIQALP 94 (430)
T ss_dssp GHHHHHHHHHT---TCEEEEEECGGG--HHH---HHTTSCEE-EECCCCSCCTTSCGGGGCSSHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHC---CCeEEEEeCHHH--HHH---HHhCCCEE-EEcCCcCccccccccccchhhHHHHHHHHHHHHHHHH
Confidence 46677778775 478988775532 222 33467653 3443221 11 1 012233
Q ss_pred HHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcccce
Q psy9408 69 LLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFA 112 (219)
Q Consensus 69 ~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v 112 (219)
.+.+++++.+||+|++-.. ...+..+|.++|+|++...
T Consensus 95 ~l~~~l~~~~pD~Vi~d~~------~~~~~~~A~~~giP~v~~~ 132 (430)
T 2iyf_A 95 QLADAYADDIPDLVLHDIT------SYPARVLARRWGVPAVSLS 132 (430)
T ss_dssp HHHHHHTTSCCSEEEEETT------CHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHhhccCCCEEEECCc------cHHHHHHHHHcCCCEEEEe
Confidence 4556677779999996322 1267788999999987654
No 65
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=70.47 E-value=46 Score=27.73 Aligned_cols=63 Identities=14% Similarity=0.132 Sum_probs=42.5
Q ss_pred hHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcC-CCEEEEcccccCCCcCcHHHHHHH
Q psy9408 37 CKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKEN-PQLVILGKQSIDSDNNQTGQMLAA 102 (219)
Q Consensus 37 ~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~-~dlVl~G~~s~d~~~~~v~~~lA~ 102 (219)
..+.++.+..+|+|.+.+.+.-....|..+.+.+..+.+..+ ..+=+-++.. .+-.++-.+++
T Consensus 158 ~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~i~~H~Hn~---~Gla~An~laA 221 (298)
T 2cw6_A 158 VAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAALAVHCHDT---YGQALANTLMA 221 (298)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHSCGGGEEEEEBCT---TSCHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCC---CchHHHHHHHH
Confidence 455677889999999888775446799999999998887763 3354444433 33345554444
No 66
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=69.68 E-value=31 Score=27.56 Aligned_cols=73 Identities=14% Similarity=0.165 Sum_probs=48.7
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEccc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGKQ 87 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~~ 87 (219)
.+.|++|+++ |.+|+.+.-.....++..+++...+..++..+..| -.|...+.+++.++.++. ..|+++.-..
T Consensus 37 ~~~a~~l~~~---G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D-l~~~~~v~~~~~~~~~~~g~id~li~~Ag 110 (266)
T 3o38_A 37 STTARRALLE---GADVVISDYHERRLGETRDQLADLGLGRVEAVVCD-VTSTEAVDALITQTVEKAGRLDVLVNNAG 110 (266)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHC---CCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeC-CCCHHHHHHHHHHHHHHhCCCcEEEECCC
Confidence 4566777765 46777666554444555555656666677777644 567888888888887775 5898887554
No 67
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=67.82 E-value=33 Score=28.07 Aligned_cols=71 Identities=11% Similarity=0.153 Sum_probs=50.2
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcC-CCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKEN-PQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~-~dlVl~G~ 86 (219)
.+.|++|+++ |.+|+......+..++..+++-+.|.+ ++.+..| -.|++.+.+.+.++.++.+ .|+++--.
T Consensus 21 ~aiA~~la~~---Ga~Vv~~~~~~~~~~~~~~~i~~~g~~-~~~~~~D-vt~~~~v~~~~~~~~~~~G~iDiLVNNA 92 (254)
T 4fn4_A 21 RAIAKKFALN---DSIVVAVELLEDRLNQIVQELRGMGKE-VLGVKAD-VSKKKDVEEFVRRTFETYSRIDVLCNNA 92 (254)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCC-EEEEECC-TTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHhcCCc-EEEEEcc-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 3567778775 478877666655566677777788865 4444433 5688888899999888874 89888543
No 68
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=66.16 E-value=42 Score=28.69 Aligned_cols=52 Identities=6% Similarity=0.045 Sum_probs=31.2
Q ss_pred hHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccc
Q psy9408 37 CKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQS 88 (219)
Q Consensus 37 ~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s 88 (219)
..+.++.+..+|++.+.+.+.-....|..+.+.+..+-+..++++.+.=+.-
T Consensus 151 ~~~ia~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~pi~~H~H 202 (345)
T 1nvm_A 151 LAEQGKLMESYGATCIYMADSGGAMSMNDIRDRMRAFKAVLKPETQVGMHAH 202 (345)
T ss_dssp HHHHHHHHHHHTCSEEEEECTTCCCCHHHHHHHHHHHHHHSCTTSEEEEECB
T ss_pred HHHHHHHHHHCCCCEEEECCCcCccCHHHHHHHHHHHHHhcCCCceEEEEEC
Confidence 3445666777788866665533345677777777776665544544444433
No 69
>3dff_A Teicoplanin pseudoaglycone deacetylases ORF2; lipoglycopeptide, zinc dependen hydrolase; HET: MSE PG4; 1.60A {Actinoplanes teichomyceticus} PDB: 2x9l_A* 3dfk_A* 3dfm_A 2xad_A*
Probab=65.73 E-value=29 Score=28.74 Aligned_cols=23 Identities=26% Similarity=0.333 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHhcCCCEEEEcc
Q psy9408 64 LSVAKLLQVIVKKENPQLVILGK 86 (219)
Q Consensus 64 ~~~A~~la~~ik~~~~dlVl~G~ 86 (219)
......|+++|++.+||+|++..
T Consensus 134 ~~l~~~l~~~ir~~~PdvV~t~~ 156 (273)
T 3dff_A 134 GEVADDIRSIIDEFDPTLVVTCA 156 (273)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCEEEECC
Confidence 57888899999999999999963
No 70
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=65.70 E-value=64 Score=29.03 Aligned_cols=90 Identities=14% Similarity=0.202 Sum_probs=55.4
Q ss_pred HHHHHHHHhhhhcCCCcEEE-EEE--ecCc----chHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCE
Q psy9408 9 IAIESAIRLRESSNKIKEII-AIS--CGNK----KCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQL 81 (219)
Q Consensus 9 ~Ale~A~~l~e~~g~g~~V~-av~--~G~~----~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dl 81 (219)
..+..+.+.+.+.| .+|. .++ .|+. ...+.++++..+|+|.+.+.+.-....|..+.+.+..+.++.+..+
T Consensus 127 ~ni~~~i~~ak~~G--~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~l~DT~G~~~P~~v~~lv~~l~~~~~~~i 204 (464)
T 2nx9_A 127 RNMQQALQAVKKMG--AHAQGTLCYTTSPVHNLQTWVDVAQQLAELGVDSIALKDMAGILTPYAAEELVSTLKKQVDVEL 204 (464)
T ss_dssp HHHHHHHHHHHHTT--CEEEEEEECCCCTTCCHHHHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHCCSCE
T ss_pred HHHHHHHHHHHHCC--CEEEEEEEeeeCCCCCHHHHHHHHHHHHHCCCCEEEEcCCCCCcCHHHHHHHHHHHHHhcCCeE
Confidence 34555666665553 5653 232 2432 2456788899999998877775456789999999988887764333
Q ss_pred EEEcccccCCCcCcHHHHHHHH
Q psy9408 82 VILGKQSIDSDNNQTGQMLAAL 103 (219)
Q Consensus 82 Vl~G~~s~d~~~~~v~~~lA~~ 103 (219)
=+=.+ +..+-.++-.+|+.
T Consensus 205 ~~H~H---nd~GlAvAN~laAv 223 (464)
T 2nx9_A 205 HLHCH---STAGLADMTLLKAI 223 (464)
T ss_dssp EEEEC---CTTSCHHHHHHHHH
T ss_pred EEEEC---CCCChHHHHHHHHH
Confidence 33233 33445566555553
No 71
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=64.37 E-value=29 Score=31.36 Aligned_cols=32 Identities=19% Similarity=0.286 Sum_probs=25.5
Q ss_pred HHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcc
Q psy9408 69 LLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQA 109 (219)
Q Consensus 69 ~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~v 109 (219)
-+.+.+++.+||+++.|. -.-.+|.++|+|++
T Consensus 408 el~~~i~~~~pDL~ig~~---------~~~~ia~k~gIP~~ 439 (492)
T 3u7q_A 408 EFEEFVKRIKPDLIGSGI---------KEKFIFQKMGIPFR 439 (492)
T ss_dssp HHHHHHHHHCCSEEEECH---------HHHHHHHHTTCCEE
T ss_pred HHHHHHHhcCCcEEEeCc---------chhHHHHHcCCCEE
Confidence 456677888999999754 44678999999987
No 72
>2xed_A Putative maleate isomerase; nicotinic acid catabolism, cofactor-independent CIS-trans isomerase; 1.95A {Nocardia farcinica} PDB: 2xec_A
Probab=63.83 E-value=61 Score=26.68 Aligned_cols=86 Identities=7% Similarity=0.014 Sum_probs=49.0
Q ss_pred cEEEEEEecCcchHHHHHH-HHhCCCCEEEEEecCC-------CCCHHHHHHHHHHHHHhcCCCEEEEc-ccccCCCcCc
Q psy9408 25 KEIIAISCGNKKCKEILQI-AMAMGVDRAILIETDT-------ILQSLSVAKLLQVIVKKENPQLVILG-KQSIDSDNNQ 95 (219)
Q Consensus 25 ~~V~av~~G~~~~~~~lr~-~~a~GaD~v~~v~~~~-------~~d~~~~A~~la~~ik~~~~dlVl~G-~~s~d~~~~~ 95 (219)
.+|..++--.....+..++ .-++|.+-+.....+. ..++..+.+++.++ .+.+.|.|++| +|-.- .-.
T Consensus 147 ~rvgvltp~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~g~~~~~~l~~~~~~l-~~~gadaIvLg~CT~l~--~~~ 223 (273)
T 2xed_A 147 QRVALVTPYMRPLAEKVVAYLEAEGFTISDWRALEVADNTEVGCIPGEQVMAAARSL-DLSEVDALVISCAVQMP--SLP 223 (273)
T ss_dssp CEEEEEECSCHHHHHHHHHHHHHTTCEEEEEEECCCCBHHHHHTCCHHHHHHHHHHS-CCTTCSEEEEESSSSSC--CTT
T ss_pred CeEEEEcCChhhhHHHHHHHHHHCCCEEeccccCCCccchhhcccCHHHHHHHHHHH-hhCCCCEEEEcCCCCcc--hHH
Confidence 4677666443322334434 4458987333333221 12444444444443 33479999999 88643 223
Q ss_pred HHHHHHHHcCCCccccee
Q psy9408 96 TGQMLAALLNWPQATFAS 113 (219)
Q Consensus 96 v~~~lA~~Lg~p~vt~v~ 113 (219)
+...+...+|.|+++...
T Consensus 224 ~~~~le~~lg~PVids~~ 241 (273)
T 2xed_A 224 LVETAEREFGIPVLSAAT 241 (273)
T ss_dssp HHHHHHHHHSSCEEEHHH
T ss_pred hHHHHHHHhCCCEEcHHH
Confidence 577888899999876543
No 73
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=62.74 E-value=47 Score=26.58 Aligned_cols=75 Identities=9% Similarity=0.073 Sum_probs=47.9
Q ss_pred hHHHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcc
Q psy9408 7 DEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGK 86 (219)
Q Consensus 7 D~~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~ 86 (219)
...+|-.+.+-.+ . ..+|.+|.-..+++ ..++.|..+|..- +.++.....+...+-..+.+.+++.+||+|++-.
T Consensus 15 nl~ali~~~~~~~-l--~~eI~~Visn~~~a-~v~~~A~~~gIp~-~~~~~~~~~~r~~~d~~~~~~l~~~~~Dliv~ag 89 (211)
T 3p9x_A 15 NAEAIIQSQKAGQ-L--PCEVALLITDKPGA-KVVERVKVHEIPV-CALDPKTYPSKEAYEIEVVQQLKEKQIDFVVLAG 89 (211)
T ss_dssp HHHHHHHHHHTTC-C--SSEEEEEEESCSSS-HHHHHHHTTTCCE-EECCGGGSSSHHHHHHHHHHHHHHTTCCEEEESS
T ss_pred HHHHHHHHHHcCC-C--CcEEEEEEECCCCc-HHHHHHHHcCCCE-EEeChhhcCchhhhHHHHHHHHHhcCCCEEEEeC
Confidence 4455555443222 1 25787777665443 5677888999874 3333221235667778888999999999999765
No 74
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=62.57 E-value=50 Score=25.25 Aligned_cols=81 Identities=14% Similarity=0.225 Sum_probs=48.0
Q ss_pred cEEEEEEecCcc------hHHHH-HHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEE-cccccCCCcCcH
Q psy9408 25 KEIIAISCGNKK------CKEIL-QIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVIL-GKQSIDSDNNQT 96 (219)
Q Consensus 25 ~~V~av~~G~~~------~~~~l-r~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~-G~~s~d~~~~~v 96 (219)
-+|..++.|.+. .-..+ +.+..+|++-....-- .-|.+.+.++|.+++++.++|+||+ |.++.+ ..-.+
T Consensus 11 ~~v~Ii~tGdE~g~i~D~n~~~l~~~L~~~G~~v~~~~iv--~Dd~~~i~~~l~~a~~~~~~DlVittGG~g~~-~~D~t 87 (172)
T 1mkz_A 11 TRIAILTVSNRRGEEDDTSGHYLRDSAQEAGHHVVDKAIV--KENRYAIRAQVSAWIASDDVQVVLITGGTGLT-EGDQA 87 (172)
T ss_dssp CEEEEEEECSSCCGGGCHHHHHHHHHHHHTTCEEEEEEEE--CSCHHHHHHHHHHHHHSSSCCEEEEESCCSSS-TTCCH
T ss_pred CEEEEEEEeCCCCcccCccHHHHHHHHHHCCCeEeEEEEe--CCCHHHHHHHHHHHHhcCCCCEEEeCCCCCCC-CCCCH
Confidence 478888988752 11234 4455689864432111 2356788888888887656897776 555544 33455
Q ss_pred HHHHHHHcCCCc
Q psy9408 97 GQMLAALLNWPQ 108 (219)
Q Consensus 97 ~~~lA~~Lg~p~ 108 (219)
...++..++.++
T Consensus 88 ~ea~~~~~~~~l 99 (172)
T 1mkz_A 88 PEALLPLFDREV 99 (172)
T ss_dssp HHHHGGGCSEEC
T ss_pred HHHHHHHhcccC
Confidence 556666655443
No 75
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=62.50 E-value=54 Score=29.10 Aligned_cols=81 Identities=17% Similarity=0.104 Sum_probs=44.4
Q ss_pred HHHHHHHHhhhhcCCCcEEEEEEecCcch--HHHHHHHHh-CC-CCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEE
Q psy9408 9 IAIESAIRLRESSNKIKEIIAISCGNKKC--KEILQIAMA-MG-VDRAILIETDTILQSLSVAKLLQVIVKKENPQLVIL 84 (219)
Q Consensus 9 ~Ale~A~~l~e~~g~g~~V~av~~G~~~~--~~~lr~~~a-~G-aD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~ 84 (219)
.++..+.-|.| + |.++..+..+.... ++.+++++. .| .+--++.. .|. ..+.+++++.+||+++.
T Consensus 323 ~~~~l~~~L~e-l--G~~vv~v~~~~~~~~~~~~~~~ll~~~~~~~~~v~~~----~d~----~~l~~~i~~~~pDl~ig 391 (458)
T 1mio_B 323 EIIALSKFIIE-L--GAIPKYVVTGTPGMKFQKEIDAMLAEAGIEGSKVKVE----GDF----FDVHQWIKNEGVDLLIS 391 (458)
T ss_dssp HHHHHHHHHHT-T--TCEEEEEEESSCCHHHHHHHHHHHHTTTCCSCEEEES----CBH----HHHHHHHHHSCCSEEEE
T ss_pred HHHHHHHHHHH-C--CCEEEEEEeCCCCHHHHHHHHHHHHhcCCCCCEEEEC----CCH----HHHHHHHHhcCCCEEEe
Confidence 34444555543 4 35666655554321 233444333 23 33222222 222 23667788889999995
Q ss_pred cccccCCCcCcHHHHHHHHcCCCcc
Q psy9408 85 GKQSIDSDNNQTGQMLAALLNWPQA 109 (219)
Q Consensus 85 G~~s~d~~~~~v~~~lA~~Lg~p~v 109 (219)
+. -.-.+|.++|+|++
T Consensus 392 ~~---------~~~~~a~k~gip~~ 407 (458)
T 1mio_B 392 NT---------YGKFIAREENIPFV 407 (458)
T ss_dssp SG---------GGHHHHHHHTCCEE
T ss_pred Cc---------chHHHHHHcCCCEE
Confidence 43 24567889999987
No 76
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=61.99 E-value=61 Score=26.12 Aligned_cols=86 Identities=7% Similarity=0.001 Sum_probs=53.0
Q ss_pred cEEEEEEecCcchHHHHHH-HHhCCCCEEEEEecCC--------CCCHHHHHHHHHHHH-HhcCCCEEEEcccccCCCcC
Q psy9408 25 KEIIAISCGNKKCKEILQI-AMAMGVDRAILIETDT--------ILQSLSVAKLLQVIV-KKENPQLVILGKQSIDSDNN 94 (219)
Q Consensus 25 ~~V~av~~G~~~~~~~lr~-~~a~GaD~v~~v~~~~--------~~d~~~~A~~la~~i-k~~~~dlVl~G~~s~d~~~~ 94 (219)
.+|..++--.....+..++ +-+.|.+ ++...... ..++..+.+.+.+++ +..++|.|++|+|-.- .-
T Consensus 118 ~rvglltpy~~~~~~~~~~~l~~~Gie-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~adaivL~CT~l~--~l 194 (240)
T 3ixl_A 118 RRVALATAYIDDVNERLAAFLAEESLV-PTGCRSLGITGVEAMARVDTATLVDLCVRAFEAAPDSDGILLSSGGLL--TL 194 (240)
T ss_dssp SEEEEEESSCHHHHHHHHHHHHHTTCE-EEEEEECCCCCHHHHHTCCHHHHHHHHHHHHHTSTTCSEEEEECTTSC--CT
T ss_pred CEEEEEeCChHHHHHHHHHHHHHCCCE-EeccccCCCCCcchhhcCCHHHHHHHHHHHhhcCCCCCEEEEeCCCCc--hh
Confidence 4666655322222233433 4458986 44443221 235666667666634 5668999999998753 33
Q ss_pred cHHHHHHHHcCCCccccee
Q psy9408 95 QTGQMLAALLNWPQATFAS 113 (219)
Q Consensus 95 ~v~~~lA~~Lg~p~vt~v~ 113 (219)
.+...+-..+|.|+++...
T Consensus 195 ~~i~~le~~lg~PVids~~ 213 (240)
T 3ixl_A 195 DAIPEVERRLGVPVVSSSP 213 (240)
T ss_dssp THHHHHHHHHSSCEEEHHH
T ss_pred hhHHHHHHHhCCCEEeHHH
Confidence 3568889999999986543
No 77
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=61.81 E-value=25 Score=28.71 Aligned_cols=83 Identities=13% Similarity=0.065 Sum_probs=48.0
Q ss_pred cEEEEEEecCcchHHHHHHH-HhCCCCEEE-EEecCC------CCCHH----HHHHHHHHHHHhcCCCEEEEcccccCCC
Q psy9408 25 KEIIAISCGNKKCKEILQIA-MAMGVDRAI-LIETDT------ILQSL----SVAKLLQVIVKKENPQLVILGKQSIDSD 92 (219)
Q Consensus 25 ~~V~av~~G~~~~~~~lr~~-~a~GaD~v~-~v~~~~------~~d~~----~~A~~la~~ik~~~~dlVl~G~~s~d~~ 92 (219)
.++-+++..+. .....+++ ..+|.+..+ .+.... ..+.. .+.+.+.+.+++.+.|.|++|++..-
T Consensus 110 ~rigVlaT~~t-~~~~~~~~l~~~g~~~~~~~v~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~gad~IVLGCTh~p-- 186 (245)
T 3qvl_A 110 TRFSIVTTLPR-TLIIARHLLHQYGFHQHCAALHAIDLPVLALEDGSGLAQEKVRERCIRALKEDGSGAIVLGSGGMA-- 186 (245)
T ss_dssp SCEEEEESCGG-GHHHHHHHHHHHTCGGGEEEEEECCSCGGGGGSSSSHHHHHHHHHHHHHHHHSCCSEEEECCGGGG--
T ss_pred CEEEEEEcchh-HHHHHHHHHHHcCCCCeEEEEeCCCCCHHHHcCCcHHHHHHHHHHHHHHHHhcCCCEEEECCCChH--
Confidence 46776666654 34444443 457866322 222111 11222 22333334455578999999999753
Q ss_pred cCcHHHHHHHHcCCCcccce
Q psy9408 93 NNQTGQMLAALLNWPQATFA 112 (219)
Q Consensus 93 ~~~v~~~lA~~Lg~p~vt~v 112 (219)
.+...+.+.+|+|++..+
T Consensus 187 --~l~~~i~~~~gVpvID~~ 204 (245)
T 3qvl_A 187 --TLAQQLTRELRVPVIDGV 204 (245)
T ss_dssp --GGHHHHHHHHTSCEECHH
T ss_pred --HHHHHHHHHcCCeEEccH
Confidence 577888999998887443
No 78
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=61.14 E-value=56 Score=26.11 Aligned_cols=72 Identities=10% Similarity=0.077 Sum_probs=45.8
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHh-CCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMA-MGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a-~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|++|+++ |.+|+.+.-.....++..+++.. .|..++..+..| -.|...+...+.++.++. .+|+++.-.
T Consensus 22 ~aia~~l~~~---G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D-v~~~~~v~~~~~~~~~~~g~id~lvnnA 95 (265)
T 3lf2_A 22 LATVELLLEA---GAAVAFCARDGERLRAAESALRQRFPGARLFASVCD-VLDALQVRAFAEACERTLGCASILVNNA 95 (265)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECC-TTCHHHHHHHHHHHHHHHCSCSEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCC-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 4567777775 46777665444333444444444 555556666644 567888888888887775 589888644
No 79
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=60.56 E-value=51 Score=29.97 Aligned_cols=32 Identities=13% Similarity=0.242 Sum_probs=23.1
Q ss_pred HHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHc-------CCCcc
Q psy9408 69 LLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALL-------NWPQA 109 (219)
Q Consensus 69 ~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~L-------g~p~v 109 (219)
.+.+.+++.+||+++.+. -+-.+|.++ |+|++
T Consensus 425 ~l~~~i~~~~pDLiig~~---------~~~~~a~~~~~~g~~~gip~v 463 (519)
T 1qgu_B 425 HFRSLMFTRQPDFMIGNS---------YGKFIQRDTLAKGKAFEVPLI 463 (519)
T ss_dssp HHHHHHHHHCCSEEEECG---------GGHHHHHHHHHHCGGGCCCEE
T ss_pred HHHHHHhhcCCCEEEECc---------chHHHHHHhhcccccCCCCeE
Confidence 345667777899999654 245677788 99986
No 80
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=59.96 E-value=50 Score=30.18 Aligned_cols=32 Identities=13% Similarity=0.199 Sum_probs=25.1
Q ss_pred HHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcc
Q psy9408 69 LLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQA 109 (219)
Q Consensus 69 ~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~v 109 (219)
.+.+++++.+||+++.|. -.-.+|.++|+|++
T Consensus 447 el~~~i~~~~pDl~ig~~---------~~~~~a~k~gIP~~ 478 (533)
T 1mio_A 447 DMEVVLEKLKPDMFFAGI---------KEKFVIQKGGVLSK 478 (533)
T ss_dssp HHHHHHHHHCCSEEEECH---------HHHHHHHHTTCEEE
T ss_pred HHHHHHHhcCCCEEEccc---------chhHHHHhcCCCEE
Confidence 366778888999998654 34678999999987
No 81
>2x5e_A UPF0271 protein PA4511; unknown function; HET: CIT; 2.30A {Pseudomonas aeruginosa} PDB: 2xu2_A*
Probab=59.85 E-value=7.1 Score=32.51 Aligned_cols=48 Identities=15% Similarity=-0.035 Sum_probs=38.5
Q ss_pred CHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcccce
Q psy9408 62 QSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFA 112 (219)
Q Consensus 62 d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v 112 (219)
.-..+|++++++++..+|+|+|+|-.-.| +..--+.|..+|+|++..+
T Consensus 126 ~d~~~A~av~~av~~~d~~L~l~~l~~~~---gs~~~~~A~~~Gl~~~~E~ 173 (252)
T 2x5e_A 126 GDDELLRAVLDACAAYRKGLPLMVLALAD---NGRELELADEADVPLLFEA 173 (252)
T ss_dssp TCHHHHHHHHHHHHHHCTTCCEEEECCSC---CHHHHHHHHHHTCCEEEEE
T ss_pred hCHHHHHHHHHHHHHhCCCcEEEEeCCCC---CCHHHHHHHHcCCcEEEEE
Confidence 45679999999999999999999965333 3377899999999987443
No 82
>3dfi_A Pseudoaglycone deacetylase DBV21; single alpha-beta domain, hydrolase; 2.10A {Actinoplanes teichomyceticus}
Probab=59.74 E-value=35 Score=28.14 Aligned_cols=23 Identities=13% Similarity=0.313 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHhcCCCEEEEcc
Q psy9408 64 LSVAKLLQVIVKKENPQLVILGK 86 (219)
Q Consensus 64 ~~~A~~la~~ik~~~~dlVl~G~ 86 (219)
......|+++|++.+||+|++..
T Consensus 131 ~~~~~~l~~~ir~~~PdvV~t~~ 153 (270)
T 3dfi_A 131 AAIREDIESMIAECDPTLVLTCV 153 (270)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCEEEeCC
Confidence 47788899999999999999963
No 83
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=59.57 E-value=56 Score=26.36 Aligned_cols=71 Identities=13% Similarity=0.158 Sum_probs=44.0
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILG 85 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G 85 (219)
.+.|.+|+++ |.+|+++.-.+...++...++...|..++..+..| -.|...+...+.++.++. ++|+++.-
T Consensus 42 ~~la~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D-l~d~~~v~~~~~~~~~~~g~iD~li~n 113 (286)
T 1xu9_A 42 REMAYHLAKM---GAHVVVTARSKETLQKVVSHCLELGAASAHYIAGT-MEDMTFAEQFVAQAGKLMGGLDMLILN 113 (286)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECC-TTCHHHHHHHHHHHHHHHTSCSEEEEC
T ss_pred HHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCC-CCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 4556677765 46777766544333444444555676677666644 457777777777776665 58988843
No 84
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=59.41 E-value=8.5 Score=33.83 Aligned_cols=70 Identities=19% Similarity=0.262 Sum_probs=45.8
Q ss_pred hHHHHHHHHhCCCCEEEEEecCC----C-C----CHHHHHHHHHHHHHhc--C-CCEEEEcccccCCCcCcHHHHHHHHc
Q psy9408 37 CKEILQIAMAMGVDRAILIETDT----I-L----QSLSVAKLLQVIVKKE--N-PQLVILGKQSIDSDNNQTGQMLAALL 104 (219)
Q Consensus 37 ~~~~lr~~~a~GaD~v~~v~~~~----~-~----d~~~~A~~la~~ik~~--~-~dlVl~G~~s~d~~~~~v~~~lA~~L 104 (219)
+.-.++.+...|+|+++.++-.. + + |...-...|++.+++. + -+.+++|-.. .+-.++..+|.+|
T Consensus 137 ak~vA~lL~~aGad~vit~DlHs~q~qgfF~ipvD~l~A~p~La~~I~~~~~~~~~~vVV~pd~---GGv~~A~~lA~~L 213 (379)
T 2ji4_A 137 SKLLASMMCKAGLTHLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPDYRNAVIVAKSP---ASAKRAQSFAERL 213 (379)
T ss_dssp HHHHHHHHHHTTCCEEEEESCSSGGGGGGSSSCEEEECCHHHHHHHHHHHSTTGGGEEEEESSG---GGHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCEEEEecCCChhhccccCCceeeeccHHHHHHHHHHhcccCCCcEEEEEcc---chHHHHHHHHHHh
Confidence 34455666679999999998532 1 2 2222346677777654 2 2556665543 4577999999999
Q ss_pred CCCcc
Q psy9408 105 NWPQA 109 (219)
Q Consensus 105 g~p~v 109 (219)
|+|+.
T Consensus 214 ~~pl~ 218 (379)
T 2ji4_A 214 RLGIA 218 (379)
T ss_dssp TCEEE
T ss_pred CCCEE
Confidence 99963
No 85
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=59.28 E-value=9.5 Score=32.77 Aligned_cols=68 Identities=21% Similarity=0.307 Sum_probs=46.1
Q ss_pred HHHHHHHhCCCCEEEEEecCC----C-C----CHHHHHHHHHHHHHhcC-CCEEEEcccccCCCcCcHHHHHHHHcCCCc
Q psy9408 39 EILQIAMAMGVDRAILIETDT----I-L----QSLSVAKLLQVIVKKEN-PQLVILGKQSIDSDNNQTGQMLAALLNWPQ 108 (219)
Q Consensus 39 ~~lr~~~a~GaD~v~~v~~~~----~-~----d~~~~A~~la~~ik~~~-~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~ 108 (219)
-.++.+-.+|+|+++.++-.. + | |....+..|++.+++.. -+.+++|-.. .+-..+..+|.+||+|+
T Consensus 116 ~vA~ll~~~G~d~vit~DlH~~qiqgfF~ipvd~l~a~p~l~~~i~~~~~~~~vVVspd~---Ggv~~A~~lA~~L~~p~ 192 (319)
T 3dah_A 116 VVANMLEIAGVERIITMDLHADQIQGFFDIPVDNIYATPILLGDLRKQNYPDLLVVSPDV---GGVVRARALAKQLNCDL 192 (319)
T ss_dssp HHHHHHHHHTCCEEEEESCSCGGGGGGCSSCEEEECCHHHHHHHHHTTCCTTEEEECCSS---TTHHHHHHHHHHTTCEE
T ss_pred HHHHHHHhcCCCEEEEEECCChHHhhhcCCceEecccHHHHHHHHHHhCCCCcEEEEeCC---CccHHHHHHHHHhCCCE
Confidence 344445568999999998532 1 2 22233577888888753 4567776544 55678999999999996
Q ss_pred c
Q psy9408 109 A 109 (219)
Q Consensus 109 v 109 (219)
.
T Consensus 193 ~ 193 (319)
T 3dah_A 193 A 193 (319)
T ss_dssp E
T ss_pred E
Confidence 4
No 86
>1xw8_A UPF0271 protein YBGL; NESG, northeast structural genomics consortium, structural genomics, protein structure initiative, PSI, X-RAY; 2.00A {Escherichia coli} SCOP: c.6.2.5
Probab=58.99 E-value=11 Score=31.29 Aligned_cols=60 Identities=12% Similarity=0.069 Sum_probs=43.4
Q ss_pred hCCCCEEEEEecCC-----CCCHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcccce
Q psy9408 46 AMGVDRAILIETDT-----ILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFA 112 (219)
Q Consensus 46 a~GaD~v~~v~~~~-----~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v 112 (219)
+.|. ++-+|..-. ...-..+|++++++++..+|+|+|+|-. +..--+.|..+|++++..+
T Consensus 95 ~~G~-~l~hVKPHGALYN~~a~d~~~A~av~~av~~~d~~L~l~~l~------gs~~~~~A~~~Gl~~~~E~ 159 (252)
T 1xw8_A 95 AQGG-VMRHVKPHGMLYNQAAKEAQLADAIARAVYACDPALILVGLA------GSELIRAGKQYGLTTREEV 159 (252)
T ss_dssp HTTC-CEEEECCCHHHHHHHTTCHHHHHHHHHHHHHHCTTCEEEEET------TSHHHHHHHHTTCCEEEEE
T ss_pred HcCC-EeEEeCcCHHHHHHHhhCHHHHHHHHHHHHHhCCCcEEEecC------ChHHHHHHHHcCCcEEEEE
Confidence 3444 456666322 1245679999999999999999999943 3377899999999987443
No 87
>1jlj_A Gephyrin; globular alpha/beta fold, structural protein; 1.60A {Homo sapiens} SCOP: c.57.1.1 PDB: 1ihc_A
Probab=58.88 E-value=62 Score=25.20 Aligned_cols=78 Identities=8% Similarity=0.045 Sum_probs=48.2
Q ss_pred cEEEEEEecCcc--------hHHHHHHHHh----CCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEE-cccccCC
Q psy9408 25 KEIIAISCGNKK--------CKEILQIAMA----MGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVIL-GKQSIDS 91 (219)
Q Consensus 25 ~~V~av~~G~~~--------~~~~lr~~~a----~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~-G~~s~d~ 91 (219)
-+|..++.|.+- .-..+...+. +|++-....-- .-|.+.+.++|.+++++.++|+||+ |.++.+
T Consensus 15 ~rv~IistGdEl~~g~~~D~n~~~L~~~L~~~~~~G~~v~~~~iv--~Dd~~~I~~al~~a~~~~~~DlVIttGGtg~g- 91 (189)
T 1jlj_A 15 IRVGVLTVSDSCFRNLAEDRSGINLKDLVQDPSLLGGTISAYKIV--PDEIEEIKETLIDWCDEKELNLILTTGGTGFA- 91 (189)
T ss_dssp CEEEEEEECHHHHTTSSCCHHHHHHHHHHHCTTTTCCEEEEEEEE--CSCHHHHHHHHHHHHHTSCCSEEEEESCCSSS-
T ss_pred CEEEEEEECCccCCCcccchHHHHHHHHHhchhcCCcEEEEEEEe--CCCHHHHHHHHHHHhhcCCCCEEEEcCCCCCC-
Confidence 478888988651 1235666665 68765543221 2356788888888887667897765 666554
Q ss_pred CcCcHHHHHHHHcC
Q psy9408 92 DNNQTGQMLAALLN 105 (219)
Q Consensus 92 ~~~~v~~~lA~~Lg 105 (219)
..-.++..++..++
T Consensus 92 ~~D~t~eal~~~~~ 105 (189)
T 1jlj_A 92 PRDVTPEATKEVIE 105 (189)
T ss_dssp TTCCHHHHHHHHCS
T ss_pred CcccHHHHHHHHhc
Confidence 33445556665553
No 88
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=58.73 E-value=75 Score=26.10 Aligned_cols=80 Identities=10% Similarity=-0.024 Sum_probs=50.7
Q ss_pred CcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHH
Q psy9408 24 IKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAAL 103 (219)
Q Consensus 24 g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~ 103 (219)
|.+|++++...... .....-...--+++.+..............+.+++++.+||+|.+.... ...+...++.+
T Consensus 34 g~~v~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~Dvv~~~~~~----~~~~~~~~~~~ 107 (394)
T 3okp_A 34 PESIVVFASTQNAE--EAHAYDKTLDYEVIRWPRSVMLPTPTTAHAMAEIIREREIDNVWFGAAA----PLALMAGTAKQ 107 (394)
T ss_dssp GGGEEEEEECSSHH--HHHHHHTTCSSEEEEESSSSCCSCHHHHHHHHHHHHHTTCSEEEESSCT----TGGGGHHHHHH
T ss_pred CCeEEEEECCCCcc--chhhhccccceEEEEccccccccchhhHHHHHHHHHhcCCCEEEECCcc----hHHHHHHHHHh
Confidence 46899999887642 1122222222345555432234455677888999999999999986543 23456677888
Q ss_pred cCCC-cc
Q psy9408 104 LNWP-QA 109 (219)
Q Consensus 104 Lg~p-~v 109 (219)
++.| ++
T Consensus 108 ~~~~~~i 114 (394)
T 3okp_A 108 AGASKVI 114 (394)
T ss_dssp TTCSEEE
T ss_pred cCCCcEE
Confidence 9998 54
No 89
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=58.38 E-value=66 Score=25.90 Aligned_cols=73 Identities=15% Similarity=0.075 Sum_probs=47.4
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCC--EEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEccc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVD--RAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGKQ 87 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD--~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~~ 87 (219)
.+.|++|+++ |.+|+.+.-.+...++..+++...|.. ++..+..| -.|...+.+++.++.++. +.|+++.-..
T Consensus 25 ~aia~~l~~~---G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~D-v~~~~~v~~~~~~~~~~~g~id~lv~nAg 100 (281)
T 3svt_A 25 KGVAAGLVAA---GASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTD-ITNEDETARAVDAVTAWHGRLHGVVHCAG 100 (281)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECC-TTSHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCC-CCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 3456777765 467776655544445555666666653 66666543 567888888888887775 5898886443
No 90
>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae}
Probab=58.29 E-value=41 Score=28.60 Aligned_cols=75 Identities=13% Similarity=0.177 Sum_probs=52.6
Q ss_pred HHHHHHHHHhhhhcCCCcEEEEEEecCcc-----------------hHHHHHHHHhCCCCEEEEEecCC---CCCHHHHH
Q psy9408 8 EIAIESAIRLRESSNKIKEIIAISCGNKK-----------------CKEILQIAMAMGVDRAILIETDT---ILQSLSVA 67 (219)
Q Consensus 8 ~~Ale~A~~l~e~~g~g~~V~av~~G~~~-----------------~~~~lr~~~a~GaD~v~~v~~~~---~~d~~~~A 67 (219)
...|+.|++++++. |...+++++-|.. .++-++.+-++|+|.++++.-+. ..+++...
T Consensus 37 q~li~~a~~~a~~~--~~~~vV~TFdphP~~v~~~~~~~~~~~Lt~~~eK~~ll~~lGVD~v~~~~F~~~~a~ls~e~Fv 114 (308)
T 3op1_A 37 QELFRVANKAARKD--LLPIVVMTFNESPKIALEPYHPDLFLHILNPAERERKLKREGVEELYLLDFSSQFASLTAQEFF 114 (308)
T ss_dssp HHHHHHHHHHSSTT--CCCEEEEEESSCTHHHHSCCCGGGGCBSSCHHHHHHHHHHHTCCEEEEECCCHHHHTCCHHHHH
T ss_pred HHHHHHHHHHHHhc--CCceEEEEecCCHHHHhCccccCCcccCCCHHHHHHHHHHcCCCEEEEecCCHHHHcCCHHHHH
Confidence 45688899998876 4678888876521 13445556678999999988653 56777666
Q ss_pred HHHHHHHHhcCCCEEEEccc
Q psy9408 68 KLLQVIVKKENPQLVILGKQ 87 (219)
Q Consensus 68 ~~la~~ik~~~~dlVl~G~~ 87 (219)
+. ++++.+++.|++|.-
T Consensus 115 ~~---ll~~l~~~~ivvG~D 131 (308)
T 3op1_A 115 AT---YIKAMNAKIIVAGFD 131 (308)
T ss_dssp HH---HHHHHTEEEEEEETT
T ss_pred HH---HHHHcCCCEEEECcC
Confidence 53 345678888888865
No 91
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=58.18 E-value=31 Score=31.12 Aligned_cols=32 Identities=19% Similarity=0.138 Sum_probs=24.9
Q ss_pred HHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcc
Q psy9408 69 LLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQA 109 (219)
Q Consensus 69 ~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~v 109 (219)
-+.+.+++.+||+++.|. -.-.+|.++|+|++
T Consensus 392 el~~~i~~~~pDL~ig~~---------~~~~~a~k~gIP~~ 423 (483)
T 3pdi_A 392 VLLKTVDEYQADILIAGG---------RNMYTALKGRVPFL 423 (483)
T ss_dssp HHHHHHHHTTCSEEECCG---------GGHHHHHHTTCCBC
T ss_pred HHHHHHHhcCCCEEEECC---------chhHHHHHcCCCEE
Confidence 456677888999999654 34478999999987
No 92
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=57.26 E-value=72 Score=25.51 Aligned_cols=75 Identities=20% Similarity=0.189 Sum_probs=46.4
Q ss_pred hhHHHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEc
Q psy9408 6 FDEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILG 85 (219)
Q Consensus 6 ~D~~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G 85 (219)
....+|-.+.+-. . +.+|.+|.--.+++ ..++.|..+|..- +.++.....+-..+-..+.+.+++.+||+|++-
T Consensus 17 snl~all~~~~~~--~--~~eI~~Vis~~~~a-~~~~~A~~~gIp~-~~~~~~~~~~r~~~d~~~~~~l~~~~~Dliv~a 90 (215)
T 3tqr_A 17 TNLQAIIGAIQKG--L--AIEIRAVISNRADA-YGLKRAQQADIPT-HIIPHEEFPSRTDFESTLQKTIDHYDPKLIVLA 90 (215)
T ss_dssp HHHHHHHHHHHTT--C--SEEEEEEEESCTTC-HHHHHHHHTTCCE-EECCGGGSSSHHHHHHHHHHHHHTTCCSEEEES
T ss_pred HHHHHHHHHHHcC--C--CCEEEEEEeCCcch-HHHHHHHHcCCCE-EEeCccccCchhHhHHHHHHHHHhcCCCEEEEc
Confidence 4455554443321 2 35787777665543 3467788889874 333321123445566778889999999999985
Q ss_pred c
Q psy9408 86 K 86 (219)
Q Consensus 86 ~ 86 (219)
.
T Consensus 91 g 91 (215)
T 3tqr_A 91 G 91 (215)
T ss_dssp S
T ss_pred c
Confidence 5
No 93
>3qel_B Glutamate [NMDA] receptor subunit epsilon-2; ION channel, allosteric modulation, phenylethanolamine, N-glycosylation, extracellular; HET: NAG BMA MAN FUC QEL; 2.60A {Rattus norvegicus} PDB: 3qem_B* 3jpw_A* 3jpy_A*
Probab=57.17 E-value=15 Score=31.28 Aligned_cols=87 Identities=11% Similarity=0.011 Sum_probs=50.2
Q ss_pred EEEEEEecCcchHHHHHHHHhCCC----C-EEEEEec-CCCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHH
Q psy9408 26 EIIAISCGNKKCKEILQIAMAMGV----D-RAILIET-DTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQM 99 (219)
Q Consensus 26 ~V~av~~G~~~~~~~lr~~~a~Ga----D-~v~~v~~-~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~ 99 (219)
.|-+|.-|... +..+|.++...- . ++..+.. -...|+...+..+.+.+...+.-.|+.|..+......++-..
T Consensus 6 ~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dp~~~~~~~C~~l~~~~V~aiIgg~~s~~~a~a~~v~~ 84 (364)
T 3qel_B 6 GIAVILVGTSD-EVAIKDAHEKDDFHHLSVVPRVELVAMNETDPKSIITRICDLMSDRKIQGVVFADDTDQEAIAQILDF 84 (364)
T ss_dssp EEEEEEESSCC-HHHHTC---------CCSEEEEEEEEECCCSHHHHHHHHHHHHHHSCEEEEEEEESSCCTHHHHHHHH
T ss_pred EEEEEEcccch-hhhhccccCccccccCCccceEEEEEecCCCHHHHHHHHHHHHHhCCeEEEEecCCCCchHHHHHHHH
Confidence 45555556654 667776664321 1 2222221 125699999999999887666767777765432111233567
Q ss_pred HHHHcCCCccccee
Q psy9408 100 LAALLNWPQATFAS 113 (219)
Q Consensus 100 lA~~Lg~p~vt~v~ 113 (219)
++..+++|+++.-.
T Consensus 85 i~~~~~iP~IS~~a 98 (364)
T 3qel_B 85 ISAQTLTPILGIHG 98 (364)
T ss_dssp HHHHHTCCEEEEEG
T ss_pred HHhccCCCEEEeec
Confidence 88999999997653
No 94
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=56.87 E-value=45 Score=27.15 Aligned_cols=73 Identities=10% Similarity=-0.058 Sum_probs=43.7
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEccc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGKQ 87 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~~ 87 (219)
.+.|.+|+++ |.+|+++.-.....++...++...|.+.+..+..| -.|.+.+.+++.++.++. .+|+++.-..
T Consensus 47 ~aia~~la~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D-v~d~~~v~~~~~~~~~~~g~iD~lvnnAG 120 (281)
T 4dry_A 47 RGIAQALSAE---GYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCD-VGDPDQVAALFAAVRAEFARLDLLVNNAG 120 (281)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECC-TTCHHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred HHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcC-CCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 3456677765 36776665444333444444444454544444433 467788888888877775 5898886543
No 95
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=56.57 E-value=11 Score=32.13 Aligned_cols=40 Identities=18% Similarity=0.204 Sum_probs=29.4
Q ss_pred HHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcccce
Q psy9408 67 AKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFA 112 (219)
Q Consensus 67 A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v 112 (219)
...+.+++++.+||+|++... .-.+..+|.++|+|++...
T Consensus 119 ~~~l~~~l~~~~pDlVv~d~~------~~~~~~aA~~~giP~v~~~ 158 (398)
T 3oti_A 119 VDGTMALVDDYRPDLVVYEQG------ATVGLLAADRAGVPAVQRN 158 (398)
T ss_dssp HHHHHHHHHHHCCSEEEEETT------CHHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHHHcCCCEEEECch------hhHHHHHHHHcCCCEEEEe
Confidence 345677788889999997322 2347788999999988654
No 96
>2dgd_A 223AA long hypothetical arylmalonate decarboxylas; octamer, alpha/beta structure, lyase; 2.90A {Sulfolobus tokodaii}
Probab=56.52 E-value=70 Score=25.06 Aligned_cols=84 Identities=11% Similarity=0.010 Sum_probs=50.5
Q ss_pred cEEEEEEecCcchHHHHH-HHHhCCCCEEEEEecCCC--------CCHHHHHHHHHHHHHhc--CCCEEEEcccccCCCc
Q psy9408 25 KEIIAISCGNKKCKEILQ-IAMAMGVDRAILIETDTI--------LQSLSVAKLLQVIVKKE--NPQLVILGKQSIDSDN 93 (219)
Q Consensus 25 ~~V~av~~G~~~~~~~lr-~~~a~GaD~v~~v~~~~~--------~d~~~~A~~la~~ik~~--~~dlVl~G~~s~d~~~ 93 (219)
.+|-.++--.....+..+ .+-++|.+ ++....... .++..+.+++.++ .+. +.|.|++|+|-.. .
T Consensus 109 ~rvgvlt~~~~~~~~~~~~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~gadaIvLgCT~l~--~ 184 (223)
T 2dgd_A 109 RKLWIGTPYIKERTLEEVEWWRNKGFE-IVGYDGLGKIRGIDISNTPIFTIYRLVKRH-LNEVLKADAVYIACTALS--T 184 (223)
T ss_dssp CEEEEEESSCHHHHHHHHHHHHTTTCE-EEEEEECCCCSHHHHHTCCHHHHHHHHHTT-HHHHTTSSEEEECCTTSC--C
T ss_pred CeEEEEeCCchHHHHHHHHHHHhCCcE-EecccCCCCCCcchhhccCHHHHHHHHHHH-hcccCCCCEEEEeCCccc--H
Confidence 467766644333233444 44458977 433332221 3555566655555 445 8999999998753 2
Q ss_pred CcHHHHHHHHcCCCcccce
Q psy9408 94 NQTGQMLAALLNWPQATFA 112 (219)
Q Consensus 94 ~~v~~~lA~~Lg~p~vt~v 112 (219)
-.+...+...+|.|+++..
T Consensus 185 ~~~~~~l~~~~g~PVids~ 203 (223)
T 2dgd_A 185 YEAVQYLHEDLDMPVVSEN 203 (223)
T ss_dssp TTHHHHHHHHHTSCEEEHH
T ss_pred HHHHHHHHHHhCCCEEEhH
Confidence 2357778888999987543
No 97
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=56.24 E-value=60 Score=26.10 Aligned_cols=74 Identities=9% Similarity=0.107 Sum_probs=45.0
Q ss_pred HHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCH-HHHHHHHHHHHHhc-CCCEEEEccc
Q psy9408 10 AIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQS-LSVAKLLQVIVKKE-NPQLVILGKQ 87 (219)
Q Consensus 10 Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~-~~~A~~la~~ik~~-~~dlVl~G~~ 87 (219)
..+.|++|+++ |.+|+++.-.....++.++++...|-.++..+..| -.|. ..+...+..+.++. ..|+++.-..
T Consensus 25 G~~~a~~L~~~---G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D-l~~~~~~v~~~~~~~~~~~g~iD~lv~nAg 100 (311)
T 3o26_A 25 GFEICKQLSSN---GIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLD-VTDPIATMSSLADFIKTHFGKLDILVNNAG 100 (311)
T ss_dssp HHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECC-TTSCHHHHHHHHHHHHHHHSSCCEEEECCC
T ss_pred HHHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEcc-CCCcHHHHHHHHHHHHHhCCCCCEEEECCc
Confidence 34567777765 46777666554444556666666666666666644 3455 55555555555543 6898887554
No 98
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=56.00 E-value=19 Score=25.23 Aligned_cols=46 Identities=13% Similarity=0.021 Sum_probs=32.2
Q ss_pred CHHHHHHHHHHHHHhcCCCEEEEc-----ccccCC---CcCcHHHHHHHHcCCCc
Q psy9408 62 QSLSVAKLLQVIVKKENPQLVILG-----KQSIDS---DNNQTGQMLAALLNWPQ 108 (219)
Q Consensus 62 d~~~~A~~la~~ik~~~~dlVl~G-----~~s~d~---~~~~v~~~lA~~Lg~p~ 108 (219)
+.......|.+++++++++.|++| +.+.+. .....+-+|+.+ ++|+
T Consensus 35 ~~~~~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~-~lpV 88 (98)
T 1iv0_A 35 TLEEDVEALLDFVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEALRAR-GVEV 88 (98)
T ss_dssp CHHHHHHHHHHHHHHHTCCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHT-TCEE
T ss_pred CcHHHHHHHHHHHHHcCCCEEEEeeccCCCCCcCHHHHHHHHHHHHHhcC-CCCE
Confidence 456677899999999999999999 333221 223457777776 6664
No 99
>1v6t_A Hypothetical UPF0271 protein PH0986; TIM-barrel, lactam utilization protein, structural genomics; 1.70A {Pyrococcus horikoshii} SCOP: c.6.2.5
Probab=55.78 E-value=13 Score=31.03 Aligned_cols=60 Identities=12% Similarity=0.094 Sum_probs=43.3
Q ss_pred hCCCCEEEEEecCC-CC----CHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcccce
Q psy9408 46 AMGVDRAILIETDT-IL----QSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFA 112 (219)
Q Consensus 46 a~GaD~v~~v~~~~-~~----d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v 112 (219)
+.|. ++-+|.... -| .-..+|++++++++..+|+|+|+|-. +..--+.|..+|++++..+
T Consensus 100 ~~G~-~l~hVKPHGALYN~~~~d~~~A~av~~av~~~d~~L~l~~l~------gs~~~~~A~~~Gl~~~~E~ 164 (255)
T 1v6t_A 100 AEGL-ELQHVKPHGALYNAMVKEEDLARAVIEGILDFDKDLILVTLS------NSRVADIAEEMGLKVAHEV 164 (255)
T ss_dssp HTTC-CEEEECCCHHHHHHHHHCHHHHHHHHHHHHHHCTTCEEEEET------TCHHHHHHHHHTCCEEEEE
T ss_pred HcCC-EeEEeccCHHHHHHHhhCHHHHHHHHHHHHHhCCCcEEEecC------ChHHHHHHHHcCCcEEEEE
Confidence 3444 466666322 22 24578999999999999999999943 3377899999999987443
No 100
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=55.68 E-value=46 Score=23.26 Aligned_cols=66 Identities=15% Similarity=0.122 Sum_probs=44.7
Q ss_pred hhHHHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcC
Q psy9408 6 FDEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKEN 78 (219)
Q Consensus 6 ~D~~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~ 78 (219)
.|...++...+|++.. +...|++++--. ..+...+++..|++.. +.. .++.......|..+++...
T Consensus 78 ~~~~g~~~~~~l~~~~-~~~~ii~lt~~~--~~~~~~~~~~~ga~~~-l~K---p~~~~~L~~~i~~~~~~~~ 143 (146)
T 4dad_A 78 LDTAELAAIEKLSRLH-PGLTCLLVTTDA--SSQTLLDAMRAGVRDV-LRW---PLEPRALDDALKRAAAQCA 143 (146)
T ss_dssp CCHHHHHHHHHHHHHC-TTCEEEEEESCC--CHHHHHHHHTTTEEEE-EES---SCCHHHHHHHHHHHHHTCC
T ss_pred CCccHHHHHHHHHHhC-CCCcEEEEeCCC--CHHHHHHHHHhCCcee-EcC---CCCHHHHHHHHHHHHhhhc
Confidence 3566788888888764 345666555332 3567788999999864 333 4788888888888876543
No 101
>2dfa_A Hypothetical UPF0271 protein TTHB195; lactam utilization protein, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} SCOP: c.6.2.5
Probab=55.20 E-value=12 Score=31.05 Aligned_cols=44 Identities=16% Similarity=0.038 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcccce
Q psy9408 63 SLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFA 112 (219)
Q Consensus 63 ~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v 112 (219)
-..+|++++++++..+|+|+|+|-. +..--+.|..+|++++..+
T Consensus 121 d~~~A~av~~av~~~d~~L~l~~l~------gs~~~~~A~~~Gl~~~~E~ 164 (250)
T 2dfa_A 121 DRETARAIALAVKAFDPGLPLVVLP------GTVYEEEARKAGLRVVLEA 164 (250)
T ss_dssp CHHHHHHHHHHHHHHCTTCCEEECT------TSHHHHHHHHTTCCEEEEE
T ss_pred CHHHHHHHHHHHHHhCCCcEEEecC------ChHHHHHHHHcCCcEEEEE
Confidence 4578999999999999999999943 3477899999999987433
No 102
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=55.19 E-value=57 Score=24.63 Aligned_cols=78 Identities=13% Similarity=0.174 Sum_probs=43.9
Q ss_pred EEEEEEecCcc--------hHHHHHHHH-hCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEE-cccccCCCcCc
Q psy9408 26 EIIAISCGNKK--------CKEILQIAM-AMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVIL-GKQSIDSDNNQ 95 (219)
Q Consensus 26 ~V~av~~G~~~--------~~~~lr~~~-a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~-G~~s~d~~~~~ 95 (219)
+|..++.|.+- .-..+...+ .+|++-....-- .-|.+.+.++|.+++++.++|+|++ |.++.+ ..-.
T Consensus 3 ~v~Ii~tGdEl~~G~i~D~n~~~l~~~l~~~G~~v~~~~iv--~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g-~~D~ 79 (164)
T 2is8_A 3 RVGILTVSDKGFRGERQDTTHLAIREVLAGGPFEVAAYELV--PDEPPMIKKVLRLWADREGLDLILTNGGTGLA-PRDR 79 (164)
T ss_dssp EEEEEEECHHHHHTSSCCCHHHHHHHHHTTSSEEEEEEEEE--CSCHHHHHHHHHHHHHTSCCSEEEEESCCSSS-TTCC
T ss_pred EEEEEEEcCcccCCCcccchHHHHHHHHHHCCCeEeEEEEc--CCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCC-CCCC
Confidence 46667777641 113455444 578754432111 2356788888888876546887765 555554 3244
Q ss_pred HHHHHHHHcCC
Q psy9408 96 TGQMLAALLNW 106 (219)
Q Consensus 96 v~~~lA~~Lg~ 106 (219)
+...++..++.
T Consensus 80 t~ea~~~~~~~ 90 (164)
T 2is8_A 80 TPEATRELLDR 90 (164)
T ss_dssp HHHHHHTTCSE
T ss_pred hHHHHHHHhCC
Confidence 55555555443
No 103
>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural GENO joint center for structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha}
Probab=55.04 E-value=36 Score=29.38 Aligned_cols=104 Identities=13% Similarity=0.125 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHHhcCCCEEEE-cccccCCCcCcHHHHHHHHcCCCcccceeEEEEeeCCeEEEEEEcCCeEEEEEEc--
Q psy9408 63 SLSVAKLLQVIVKKENPQLVIL-GKQSIDSDNNQTGQMLAALLNWPQATFASKIVLKKNNKILVTQEIEDGKETILLS-- 139 (219)
Q Consensus 63 ~~~~A~~la~~ik~~~~dlVl~-G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~~l~~~~~~~~~~~R~~~gG~~~~~~~-- 139 (219)
+......+.+.+++.++|+|+. |..| .-+++-.+|.+.+.|++.=-|...-.+-+.+.+.. ..+-+..+.-.
T Consensus 74 ~~~~v~~~~~~~~~~~~D~IIavGGGs----viD~aK~iA~~~~~p~i~IPTT~tgSevt~~~v~~-~~~~K~~~~~~~~ 148 (358)
T 3jzd_A 74 PIESARDATARAREAGADCAVAVGGGS----TTGLGKAIALETGMPIVAIPTTYAGSEVTPVYGLT-EAGTKRTGRDPRV 148 (358)
T ss_dssp BHHHHHHHHHHHHHHTCSEEEEEESHH----HHHHHHHHHHHHCCCEEEEECSSCCGGGCSEEEEE-ETTEEEEEECGGG
T ss_pred CHHHHHHHHHHhhccCCCEEEEeCCcH----HHHHHHHHHhccCCCEEEEeCCccccccccceEEc-CCCeeEeeccCCc
Confidence 3455566667777889997764 4333 23488899999999987544432100011222222 12334444322
Q ss_pred CCEEEEEecCCCC--CCCCCHHHHHHHccCcceE
Q psy9408 140 LPAIITTDLRMNE--PRYVTLMNIIKARKKNINI 171 (219)
Q Consensus 140 ~P~vvtv~~~~~~--pr~p~l~~~~~A~~~~i~~ 171 (219)
.|.++-+.+.... |+.-+....+.+-++-+|.
T Consensus 149 ~P~~vi~Dp~l~~tlP~~~~aag~~Dal~ha~Ea 182 (358)
T 3jzd_A 149 LPRTVIYDPALTVGLPRGLSVTSALNAIAHAAEG 182 (358)
T ss_dssp SCSEEEECGGGGTTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEChHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 5888888875543 5555666677776665543
No 104
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=54.69 E-value=71 Score=28.45 Aligned_cols=71 Identities=18% Similarity=0.093 Sum_probs=45.7
Q ss_pred EEEEecCcchHHHHHHHHhCCCCEEEEEecCC--CCC---------HHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcH
Q psy9408 28 IAISCGNKKCKEILQIAMAMGVDRAILIETDT--ILQ---------SLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQT 96 (219)
Q Consensus 28 ~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~--~~d---------~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v 96 (219)
++|..++..+-...+-+..+|..-+....... .++ .+. ..+.+++++.+||+++.+. -
T Consensus 316 v~i~~~~~~~~~l~~~L~elGm~vv~~~~~~~~~~~~~~~~~~v~~~D~--~~le~~i~~~~pDllig~~---------~ 384 (458)
T 3pdi_B 316 TAIAADPDLLLGFDALLRSMGAHTVAAVVPARAAALVDSPLPSVRVGDL--EDLEHAARAGQAQLVIGNS---------H 384 (458)
T ss_dssp EEEECCHHHHHHHHHHHHTTTCEEEEEEESSCCSCCTTTTSSCEEESHH--HHHHHHHHHHTCSEEEECT---------T
T ss_pred EEEECCcHHHHHHHHHHHHCCCEEEEEEECCCChhhhhCccCcEEeCCH--HHHHHHHHhcCCCEEEECh---------h
Confidence 33443433334455667789999887776421 111 121 2477888899999999543 3
Q ss_pred HHHHHHHcCCCcc
Q psy9408 97 GQMLAALLNWPQA 109 (219)
Q Consensus 97 ~~~lA~~Lg~p~v 109 (219)
.-.+|.++|+|++
T Consensus 385 ~~~~a~k~gip~~ 397 (458)
T 3pdi_B 385 ALASARRLGVPLL 397 (458)
T ss_dssp HHHHHHHTTCCEE
T ss_pred HHHHHHHcCCCEE
Confidence 4578999999987
No 105
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=54.50 E-value=55 Score=26.12 Aligned_cols=60 Identities=15% Similarity=0.207 Sum_probs=39.3
Q ss_pred cEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcc
Q psy9408 25 KEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGK 86 (219)
Q Consensus 25 ~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~ 86 (219)
.+|.+|.-..+++ ..++.|..+|..- +.++.....+...+-..+.+.+++.+||+|++-.
T Consensus 35 ~~I~~Visn~~~a-~~l~~A~~~gIp~-~~~~~~~~~~r~~~d~~~~~~l~~~~~Dliv~ag 94 (209)
T 4ds3_A 35 AEIVAVFSDKAEA-GGLAKAEAAGIAT-QVFKRKDFASKEAHEDAILAALDVLKPDIICLAG 94 (209)
T ss_dssp EEEEEEEESCTTC-THHHHHHHTTCCE-EECCGGGSSSHHHHHHHHHHHHHHHCCSEEEESS
T ss_pred cEEEEEEECCccc-HHHHHHHHcCCCE-EEeCccccCCHHHHHHHHHHHHHhcCCCEEEEec
Confidence 5777776654443 3467788888774 3333211224556667888889999999999755
No 106
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=54.34 E-value=81 Score=25.11 Aligned_cols=71 Identities=20% Similarity=0.214 Sum_probs=45.4
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|++|+++ |.+|+.+.-.....++..+++...|.. +..+..| -.|...+.+.+.++.++. +.|+++.-.
T Consensus 25 ~aia~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D-v~~~~~v~~~~~~~~~~~g~id~lv~nA 96 (264)
T 3ucx_A 25 TTLARRCAEQ---GADLVLAARTVERLEDVAKQVTDTGRR-ALSVGTD-ITDDAQVAHLVDETMKAYGRVDVVINNA 96 (264)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCC-EEEEECC-TTCHHHHHHHHHHHHHHTSCCSEEEECC
T ss_pred HHHHHHHHHC---cCEEEEEeCCHHHHHHHHHHHHhcCCc-EEEEEcC-CCCHHHHHHHHHHHHHHcCCCcEEEECC
Confidence 3556777765 467776655444444555555566644 4444433 568888888888888876 589888654
No 107
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=53.76 E-value=90 Score=25.49 Aligned_cols=91 Identities=14% Similarity=0.106 Sum_probs=50.8
Q ss_pred HHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCC--CC-------CHH---HHHHHHHHHHHh
Q psy9408 9 IAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDT--IL-------QSL---SVAKLLQVIVKK 76 (219)
Q Consensus 9 ~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~--~~-------d~~---~~A~~la~~ik~ 76 (219)
.++..|..|++. |.+|+.++.++..... ..-..|.. ++.+.... .. ... .....+.+++++
T Consensus 22 ~~~~la~~L~~~---G~~V~v~~~~~~~~~~---~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 94 (364)
T 1f0k_A 22 PGLAVAHHLMAQ---GWQVRWLGTADRMEAD---LVPKHGIE-IDFIRISGLRGKGIKALIAAPLRIFNAWRQARAIMKA 94 (364)
T ss_dssp HHHHHHHHHHTT---TCEEEEEECTTSTHHH---HGGGGTCE-EEECCCCCCTTCCHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc---CCEEEEEecCCcchhh---hccccCCc-eEEecCCccCcCccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345677777764 4799988876542111 12224654 33343221 11 111 123456677888
Q ss_pred cCCCEEEEcccccCCCcCcHHHHHHHHcCCCccc
Q psy9408 77 ENPQLVILGKQSIDSDNNQTGQMLAALLNWPQAT 110 (219)
Q Consensus 77 ~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt 110 (219)
.+||+|++-... ....+..++..+++|++.
T Consensus 95 ~~pDvv~~~~~~----~~~~~~~~~~~~~~p~v~ 124 (364)
T 1f0k_A 95 YKPDVVLGMGGY----VSGPGGLAAWSLGIPVVL 124 (364)
T ss_dssp HCCSEEEECSST----THHHHHHHHHHTTCCEEE
T ss_pred cCCCEEEEeCCc----CchHHHHHHHHcCCCEEE
Confidence 899999985321 122345667778999873
No 108
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=53.14 E-value=38 Score=26.54 Aligned_cols=28 Identities=32% Similarity=0.178 Sum_probs=22.2
Q ss_pred HHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcc
Q psy9408 73 IVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQA 109 (219)
Q Consensus 73 ~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~v 109 (219)
-+++.++++|+.|. +...+|.++|+|.+
T Consensus 137 ~l~~~G~~vvVG~~---------~~~~~A~~~Gl~~v 164 (196)
T 2q5c_A 137 KVKTENIKIVVSGK---------TVTDEAIKQGLYGE 164 (196)
T ss_dssp HHHHTTCCEEEECH---------HHHHHHHHTTCEEE
T ss_pred HHHHCCCeEEECCH---------HHHHHHHHcCCcEE
Confidence 44557999999655 77899999999955
No 109
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=52.84 E-value=75 Score=24.73 Aligned_cols=74 Identities=7% Similarity=0.041 Sum_probs=45.7
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecC-CCCCHHHHHHHHHHHHHhc-CCCEEEEccc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETD-TILQSLSVAKLLQVIVKKE-NPQLVILGKQ 87 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~-~~~d~~~~A~~la~~ik~~-~~dlVl~G~~ 87 (219)
.+.|++|+++ |.+|+.+.-.....++..+++...|..+...+..+ ...|...+...+.++.++. ++|+++.-..
T Consensus 28 ~~ia~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~g~id~lv~nAg 103 (247)
T 3i1j_A 28 AAAARAYAAH---GASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEFGRLDGLLHNAS 103 (247)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred HHHHHHHHHC---CCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHhCCCCCEEEECCc
Confidence 4556777765 46777665554444555556666665544444433 2367777878777777765 5898886544
No 110
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=52.53 E-value=81 Score=25.43 Aligned_cols=71 Identities=13% Similarity=0.040 Sum_probs=44.0
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|++|+++ |.+|+++.-.....++..+++...|.+ +..+..| -.|...+..++.++.++. ..|+++.-.
T Consensus 38 ~aia~~la~~---G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D-v~d~~~v~~~~~~~~~~~g~id~lv~nA 109 (279)
T 3sju_A 38 LAVARTLAAR---GIAVYGCARDAKNVSAAVDGLRAAGHD-VDGSSCD-VTSTDEVHAAVAAAVERFGPIGILVNSA 109 (279)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHTTTCC-EEEEECC-TTCHHHHHHHHHHHHHHHCSCCEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhcCCc-EEEEECC-CCCHHHHHHHHHHHHHHcCCCcEEEECC
Confidence 3456777765 467766554443344455555555654 4444433 567888888888888776 579888644
No 111
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=52.48 E-value=16 Score=29.78 Aligned_cols=41 Identities=10% Similarity=0.191 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHhc--CCCEEEEcccccCCCcCcHHHHHHHHcCCCcc
Q psy9408 65 SVAKLLQVIVKKE--NPQLVILGKQSIDSDNNQTGQMLAALLNWPQA 109 (219)
Q Consensus 65 ~~A~~la~~ik~~--~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~v 109 (219)
..++.+++.+++. ++|+|+.... .+--++..+|..||.|++
T Consensus 73 ~l~~~la~~i~~~~~~~D~Ivg~~~----gGi~~a~~lA~~L~~p~~ 115 (234)
T 3m3h_A 73 TIAAGLEELIKEHFPTVEVIAGTAT----AGIAHAAWVSDRMDLPMC 115 (234)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEC-------CHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHhCCCCCEEEEecc----chHHHHHHHHHHcCCCEE
Confidence 5677788888776 7898876554 245688999999999975
No 112
>1di6_A MOGA, molybdenum cofactor biosynthetic enzyme; MOCO, MOCO biosynthesis, gephyrin function; 1.45A {Escherichia coli} SCOP: c.57.1.1 PDB: 1di7_A
Probab=52.42 E-value=83 Score=24.67 Aligned_cols=75 Identities=16% Similarity=0.140 Sum_probs=43.4
Q ss_pred EEEEEEecCcch--------HHHHHH-HHhCCCC----EEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEE-cccccCC
Q psy9408 26 EIIAISCGNKKC--------KEILQI-AMAMGVD----RAILIETDTILQSLSVAKLLQVIVKKENPQLVIL-GKQSIDS 91 (219)
Q Consensus 26 ~V~av~~G~~~~--------~~~lr~-~~a~GaD----~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~-G~~s~d~ 91 (219)
+|..++.|++-. -..+.+ +-.+|++ ...++.| |.+.+.++|.+++++.++|+||+ |.++.+
T Consensus 5 rv~IIttGdEl~~G~i~D~n~~~L~~~L~~~G~~~~v~~~~iV~D----d~~~I~~al~~a~~~~~~DlVitTGGtg~g- 79 (195)
T 1di6_A 5 RIGLVSISDRASSGVYQDKGIPALEEWLTSALTTPFELETRLIPD----EQAIIEQTLCELVDEMSCHLVLTTGGTGPA- 79 (195)
T ss_dssp EEEEEEEECC-------CCHHHHHHHHHHHHBCSCEEEEEEEEES----CHHHHHHHHHHHHHTSCCSEEEEESCCSSS-
T ss_pred EEEEEEECCCCCCCeEEchHHHHHHHHHHHcCCCCceEEEEEeCC----CHHHHHHHHHHHHhcCCCCEEEECCCCCCC-
Confidence 577777776521 123433 4457877 2223343 56788888888887667898776 555544
Q ss_pred CcCcHHHHHHHHcC
Q psy9408 92 DNNQTGQMLAALLN 105 (219)
Q Consensus 92 ~~~~v~~~lA~~Lg 105 (219)
..-.++-.++..++
T Consensus 80 ~~D~T~ea~~~~~~ 93 (195)
T 1di6_A 80 RRDVTPDATLAVAD 93 (195)
T ss_dssp TTCCHHHHHHHTCS
T ss_pred CCccHHHHHHHHhc
Confidence 32344555555443
No 113
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*
Probab=52.36 E-value=33 Score=28.80 Aligned_cols=61 Identities=7% Similarity=0.145 Sum_probs=42.5
Q ss_pred hCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-----CCCEEEEcccccCCCcCcHHHHHHHHcCCCc
Q psy9408 46 AMGVDRAILIETDTILQSLSVAKLLQVIVKKE-----NPQLVILGKQSIDSDNNQTGQMLAALLNWPQ 108 (219)
Q Consensus 46 a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-----~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~ 108 (219)
..|..+-+...++ + ..+--+.+..+++++- +.|.|++|.++.|......+.+++.+||++-
T Consensus 38 ~~Gi~~R~~a~~~-e-~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lGl~~ 103 (321)
T 3il6_A 38 RTGISERRIVTQE-N-TSDLCHQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGATE 103 (321)
T ss_dssp HHSCSEEECCSSC-C-HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCTT
T ss_pred hcCceEEEECCCC-C-HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCcCCCcHHHHHHHHcCCCC
Confidence 3588887766543 3 3333444555555543 4689999988877777778999999999974
No 114
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=52.06 E-value=9.7 Score=32.86 Aligned_cols=68 Identities=13% Similarity=0.145 Sum_probs=43.5
Q ss_pred HHHHHHHhCCCCEEEEEecCC----C-C----CHHHHHHHHHHHHHhcC---CCEEEEcccccCCCcCcHHHHHHHHcCC
Q psy9408 39 EILQIAMAMGVDRAILIETDT----I-L----QSLSVAKLLQVIVKKEN---PQLVILGKQSIDSDNNQTGQMLAALLNW 106 (219)
Q Consensus 39 ~~lr~~~a~GaD~v~~v~~~~----~-~----d~~~~A~~la~~ik~~~---~dlVl~G~~s~d~~~~~v~~~lA~~Lg~ 106 (219)
-.++.+-.+|+|+++.++-.. + | |...-+..|++.+++.- -+.+++|-.. .+-..+..+|.+||+
T Consensus 111 ~vA~lL~~~G~drvit~DlH~~qiqgfF~ipvd~l~a~p~l~~~i~~~~~~~~~~vVVspd~---Ggv~~A~~lA~~L~~ 187 (326)
T 3s5j_B 111 LVANMLSVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRENISEWRNCTIVSPDA---GGAKRVTSIADRLNV 187 (326)
T ss_dssp HHHHHHHHHTCSEEEEESCSSGGGGGGCSSCEEEECSHHHHHHHHHHHCTTGGGCEEEESSG---GGHHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCCEEEEEeCCChHHHhhcCCceeceEcHHHHHHHHHHhcCcCCCcEEEEECC---CchHHHHHHHHHcCC
Confidence 344445568999999998432 1 2 22222467777777642 2455555443 456789999999999
Q ss_pred Ccc
Q psy9408 107 PQA 109 (219)
Q Consensus 107 p~v 109 (219)
|+.
T Consensus 188 ~~~ 190 (326)
T 3s5j_B 188 DFA 190 (326)
T ss_dssp EEE
T ss_pred CEE
Confidence 864
No 115
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=51.86 E-value=87 Score=24.78 Aligned_cols=72 Identities=15% Similarity=0.076 Sum_probs=47.9
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEccc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQ 87 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~ 87 (219)
.+.|++|+++ |.+|+.+.-.....++..+++-..|. ++..+..| -.|...+.+++.++.++.++|+++.-..
T Consensus 21 ~aia~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D-v~~~~~v~~~~~~~~~~g~id~lv~nAg 92 (252)
T 3h7a_A 21 AEIAKKFAAE---GFTVFAGRRNGEKLAPLVAEIEAAGG-RIVARSLD-ARNEDEVTAFLNAADAHAPLEVTIFNVG 92 (252)
T ss_dssp HHHHHHHHHT---TCEEEEEESSGGGGHHHHHHHHHTTC-EEEEEECC-TTCHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred HHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEECc-CCCHHHHHHHHHHHHhhCCceEEEECCC
Confidence 4567777775 46888776665556666666666664 45555533 5678888888887777645788886543
No 116
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=51.74 E-value=79 Score=24.21 Aligned_cols=78 Identities=9% Similarity=0.038 Sum_probs=47.0
Q ss_pred cEEEEEEecCcc--------hHHHHHHHHh----CCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEE-cccccCC
Q psy9408 25 KEIIAISCGNKK--------CKEILQIAMA----MGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVIL-GKQSIDS 91 (219)
Q Consensus 25 ~~V~av~~G~~~--------~~~~lr~~~a----~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~-G~~s~d~ 91 (219)
-+|..++.|.+- .-..+...+. +|++-.+.+- .-|.+.+.++|.+++++.++|+||+ |.++.+
T Consensus 6 ~rv~IistGdE~~~G~i~Dsn~~~l~~~l~~l~~~G~~v~~~iv---~Dd~~~I~~~l~~~~~~~~~DlVittGG~g~g- 81 (178)
T 2pbq_A 6 AVIGVVTISDRASKGIYEDISGKAIIDYLKDVIITPFEVEYRVI---PDERDLIEKTLIELADEKGCSLILTTGGTGPA- 81 (178)
T ss_dssp CEEEEEEECHHHHHTSSCCHHHHHHHHHHHHHBCSCCEEEEEEE---CSCHHHHHHHHHHHHHTSCCSEEEEESCCSSS-
T ss_pred CEEEEEEeCCcCCCCCeecchHHHHHHHHHHHHhCCCEEEEEEc---CCCHHHHHHHHHHHHhcCCCCEEEECCCCCCC-
Confidence 478888888751 1124555444 8986422222 2356788888888887557897765 555544
Q ss_pred CcCcHHHHHHHHcCC
Q psy9408 92 DNNQTGQMLAALLNW 106 (219)
Q Consensus 92 ~~~~v~~~lA~~Lg~ 106 (219)
..-.+...++..++.
T Consensus 82 ~~D~t~ea~~~~~~~ 96 (178)
T 2pbq_A 82 PRDVTPEATEAVCEK 96 (178)
T ss_dssp TTCCHHHHHHHHCSE
T ss_pred CCCchHHHHHHHhCC
Confidence 334455566665543
No 117
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=51.32 E-value=46 Score=27.20 Aligned_cols=71 Identities=14% Similarity=0.108 Sum_probs=48.0
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|++|+++ |.+|.....-.+..++..+++.+.|.+ ++.+..| -.|.+.+.+.+.++.++. +.|+++--.
T Consensus 23 ~aia~~la~~---Ga~Vvi~~~~~~~~~~~~~~l~~~g~~-~~~~~~D-v~~~~~v~~~~~~~~~~~G~iDiLVNNA 94 (255)
T 4g81_D 23 FAYAEGLAAA---GARVILNDIRATLLAESVDTLTRKGYD-AHGVAFD-VTDELAIEAAFSKLDAEGIHVDILINNA 94 (255)
T ss_dssp HHHHHHHHHT---TCEEEECCSCHHHHHHHHHHHHHTTCC-EEECCCC-TTCHHHHHHHHHHHHHTTCCCCEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCCc-EEEEEee-CCCHHHHHHHHHHHHHHCCCCcEEEECC
Confidence 3557778875 467766554444455666777778865 4444433 568888989999988887 479888644
No 118
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=51.30 E-value=18 Score=31.33 Aligned_cols=37 Identities=24% Similarity=0.312 Sum_probs=27.0
Q ss_pred HHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcccce
Q psy9408 70 LQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFA 112 (219)
Q Consensus 70 la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v 112 (219)
+.+++++.+||+|++.... ..+..+|.++|+|++...
T Consensus 136 l~~~~~~~~pDlVv~d~~~------~~~~~aA~~lgiP~v~~~ 172 (441)
T 2yjn_A 136 MVSFCRKWRPDLVIWEPLT------FAAPIAAAVTGTPHARLL 172 (441)
T ss_dssp HHHHHHHHCCSEEEECTTC------THHHHHHHHHTCCEEEEC
T ss_pred HHHHHHhcCCCEEEecCcc------hhHHHHHHHcCCCEEEEe
Confidence 4445667799999965422 367888999999987653
No 119
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=51.28 E-value=51 Score=26.20 Aligned_cols=73 Identities=14% Similarity=0.141 Sum_probs=45.0
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhC--CCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEccc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAM--GVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGKQ 87 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~--GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~~ 87 (219)
.+.|++|+++ |.+|+.+.-.....++..+++... +..++..+..| -.|...+.+.+.++.++. ..|+++.-..
T Consensus 21 ~aia~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D-v~~~~~v~~~~~~~~~~~g~iD~lvnnAg 96 (250)
T 3nyw_A 21 AVIAAGLATD---GYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLD-ITDCTKADTEIKDIHQKYGAVDILVNAAA 96 (250)
T ss_dssp HHHHHHHHHH---TCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECC-TTCHHHHHHHHHHHHHHHCCEEEEEECCC
T ss_pred HHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHHhccccCcceEEecc-CCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 4567777775 367776655444344444444443 43555555533 567888888888887776 4788886543
No 120
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=51.12 E-value=86 Score=25.24 Aligned_cols=72 Identities=17% Similarity=0.053 Sum_probs=46.3
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEccc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGKQ 87 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~~ 87 (219)
.+.|++|+++ |.+|+.+.-.....++..+++...|. ++..+..| -.|...+...+.++.++. +.|+++.-..
T Consensus 18 ~aia~~la~~---G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D-v~d~~~v~~~~~~~~~~~g~iD~lVnnAG 90 (264)
T 3tfo_A 18 EGIARELGVA---GAKILLGARRQARIEAIATEIRDAGG-TALAQVLD-VTDRHSVAAFAQAAVDTWGRIDVLVNNAG 90 (264)
T ss_dssp HHHHHHHHHT---TCEEEEEESSHHHHHHHHHHHHHTTC-EEEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEcC-CCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 4567778775 46877665544444455555556665 44444433 567888888888887775 5898886543
No 121
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=50.44 E-value=93 Score=24.65 Aligned_cols=72 Identities=7% Similarity=0.072 Sum_probs=45.9
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEccc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGKQ 87 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~~ 87 (219)
.+.|++|+++ |.+|+.+.-.....++..+++...|.. +..+..| -.|...+.+.+.++.++. +.|+++.-..
T Consensus 26 ~~ia~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D-v~d~~~v~~~~~~~~~~~g~id~lv~nAg 98 (256)
T 3gaf_A 26 RAIAGTFAKA---GASVVVTDLKSEGAEAVAAAIRQAGGK-AIGLECN-VTDEQHREAVIKAALDQFGKITVLVNNAG 98 (256)
T ss_dssp HHHHHHHHHH---TCEEEEEESSHHHHHHHHHHHHHTTCC-EEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhcCCc-EEEEECC-CCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 3557777776 467776655444344455555556644 4445433 568888888888888776 5898886543
No 122
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=50.24 E-value=29 Score=29.71 Aligned_cols=59 Identities=8% Similarity=0.009 Sum_probs=31.6
Q ss_pred HHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEE
Q psy9408 14 AIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVIL 84 (219)
Q Consensus 14 A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~ 84 (219)
|.+++...| .+|+++.-. ++-++.+..+|+|.++.-. . ..+.+.+.++....++|+||-
T Consensus 188 a~q~a~~~G--a~Vi~~~~~----~~~~~~~~~lGa~~~~~~~---~---~~~~~~v~~~t~~~g~d~v~d 246 (379)
T 3iup_A 188 LNQICLKDG--IKLVNIVRK----QEQADLLKAQGAVHVCNAA---S---PTFMQDLTEALVSTGATIAFD 246 (379)
T ss_dssp HHHHHHHHT--CCEEEEESS----HHHHHHHHHTTCSCEEETT---S---TTHHHHHHHHHHHHCCCEEEE
T ss_pred HHHHHHHCC--CEEEEEECC----HHHHHHHHhCCCcEEEeCC---C---hHHHHHHHHHhcCCCceEEEE
Confidence 344444443 466655422 2234445567777665422 1 223455666666668999984
No 123
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=50.13 E-value=31 Score=29.04 Aligned_cols=18 Identities=22% Similarity=0.455 Sum_probs=9.2
Q ss_pred HHHHHHHHHhcCCCEEEE
Q psy9408 67 AKLLQVIVKKENPQLVIL 84 (219)
Q Consensus 67 A~~la~~ik~~~~dlVl~ 84 (219)
...+.++....++|+|+-
T Consensus 222 ~~~v~~~~~~~g~D~vid 239 (349)
T 3pi7_A 222 EATLREVMKAEQPRIFLD 239 (349)
T ss_dssp HHHHHHHHHHHCCCEEEE
T ss_pred HHHHHHHhcCCCCcEEEE
Confidence 344444444446777663
No 124
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=50.12 E-value=69 Score=27.85 Aligned_cols=71 Identities=18% Similarity=0.131 Sum_probs=40.6
Q ss_pred HHHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcc
Q psy9408 8 EIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGK 86 (219)
Q Consensus 8 ~~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~ 86 (219)
+.++..++.+++. |.+++++.-.+....... .-+|+.+.+......+.+.-...|.+++++.++|+|+.|.
T Consensus 16 ~~a~~i~~aa~~~---G~~~v~v~~~~~~~~~~~-----~~ad~~~~i~~~~~~~~~~d~~~l~~~~~~~~~d~i~p~~ 86 (446)
T 3ouz_A 16 EIALRALRTIKEM---GKKAICVYSEADKDALYL-----KYADASICIGKARSSESYLNIPAIIAAAEIAEADAIFPGY 86 (446)
T ss_dssp HHHHHHHHHHHHT---TCEEEEEEEGGGTTCTHH-----HHSSEEEEEECCTTTTGGGCHHHHHHHHHHHTCSEEECCS
T ss_pred HHHHHHHHHHHHc---CCEEEEEEcCcccccchH-----hhCCEEEEcCCCCccccccCHHHHHHHHHHhCcCEEEECC
Confidence 3566666666654 467777653322100111 1268888876322222333335677788888999999764
No 125
>3hl0_A Maleylacetate reductase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str}
Probab=50.09 E-value=41 Score=28.91 Aligned_cols=103 Identities=17% Similarity=0.173 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHHhcCCCEEEE-cccccCCCcCcHHHHHHHHcCCCcccceeEEEEe-eCCeEEEEEEcCCeEEEEEEc-
Q psy9408 63 SLSVAKLLQVIVKKENPQLVIL-GKQSIDSDNNQTGQMLAALLNWPQATFASKIVLK-KNNKILVTQEIEDGKETILLS- 139 (219)
Q Consensus 63 ~~~~A~~la~~ik~~~~dlVl~-G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~~l~~~-~~~~~~~~R~~~gG~~~~~~~- 139 (219)
+......+.+.+++.++|+|+. |..| ..+++-.+|.+.+.|++.=-|.. .. +-+.+.+.. ..+-+..+.-+
T Consensus 72 ~~~~v~~~~~~~~~~~~D~IIavGGGs----~iD~aK~iA~~~~~p~i~IPTTa-tgSe~t~~~v~~-~~~~K~~~~~~~ 145 (353)
T 3hl0_A 72 PVEVTKTAVEAYRAAGADCVVSLGGGS----TTGLGKAIALRTDAAQIVIPTTY-AGSEVTPILGQT-ENGVKTTMRGPE 145 (353)
T ss_dssp BHHHHHHHHHHHHHTTCSEEEEEESHH----HHHHHHHHHHHHCCEEEEEECSS-CCGGGCCEEEEE-ETTEEEEEECTT
T ss_pred cHHHHHHHHHHHhccCCCEEEEeCCcH----HHHHHHHHHhccCCCEEEEeCCc-hhhhccCceEEc-CCCeeEeeecCC
Confidence 3455566667778889998764 3333 23488899999999987644443 11 112222222 22224444333
Q ss_pred -CCEEEEEecCCCC--CCCCCHHHHHHHccCcceE
Q psy9408 140 -LPAIITTDLRMNE--PRYVTLMNIIKARKKNINI 171 (219)
Q Consensus 140 -~P~vvtv~~~~~~--pr~p~l~~~~~A~~~~i~~ 171 (219)
.|.++-+.+.... |+.-+....+.+-++-+|.
T Consensus 146 ~~P~~vi~Dp~l~~tlP~~~~aag~~Dal~ha~Ea 180 (353)
T 3hl0_A 146 ILPEVVIYDAELTLGLPVAISMTSGLNAMAHAAEA 180 (353)
T ss_dssp TSCSEEEECGGGGTTSCHHHHHHHHHHHHHHHHHH
T ss_pred cCccEEEEChHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 5888888875543 5555666677776665543
No 126
>2x0k_A Riboflavin biosynthesis protein RIBF; riboflavin kinase, nucleotide-binding, transferase, ATP-BIND multifunctional enzyme; 1.95A {Corynebacterium ammoniagenes}
Probab=50.05 E-value=31 Score=29.70 Aligned_cols=76 Identities=13% Similarity=0.218 Sum_probs=46.1
Q ss_pred HHHHHHHHHhhhhcCCCcEEEEEEecCc---------------chHHHHHHHHhCCCCEEEEEecCC---CCCHHHHHHH
Q psy9408 8 EIAIESAIRLRESSNKIKEIIAISCGNK---------------KCKEILQIAMAMGVDRAILIETDT---ILQSLSVAKL 69 (219)
Q Consensus 8 ~~Ale~A~~l~e~~g~g~~V~av~~G~~---------------~~~~~lr~~~a~GaD~v~~v~~~~---~~d~~~~A~~ 69 (219)
...|+.|++++++. +..++++++-+. ..++-++.+-++|+|.++++.-+. ..+++.....
T Consensus 32 q~Li~~a~~~a~~~--~~~~vvvtFdphP~~v~~~~~~~~~L~~~~eR~~ll~~~gVD~v~v~~F~~~~a~ls~e~Fi~~ 109 (338)
T 2x0k_A 32 QKLINATVEKAREV--GAKAIMVTFDPHPVSVFLPRRAPLGITTLAERFALAESFGIDGVLVIDFTRELSGTSPEKYVEF 109 (338)
T ss_dssp HHHHHHHHHHHHHH--TCEEEEEEESSCHHHHHSTTCSCCBSSCHHHHHHHHHHTTCSEEEEECTTTSSSSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHc--CCcEEEEEecCCHHHHcCCccCCCCCCCHHHHHHHHHhcCCCEEEEccccHHHHhCCHHHHHHH
Confidence 46789999999876 467888887431 124445666678999999887543 3455533322
Q ss_pred HHHHHHhcCCCEEEEccc
Q psy9408 70 LQVIVKKENPQLVILGKQ 87 (219)
Q Consensus 70 la~~ik~~~~dlVl~G~~ 87 (219)
+ ++++.+++.|++|..
T Consensus 110 i--l~~~l~~~~ivvG~D 125 (338)
T 2x0k_A 110 L--LEDTLHASHVVVGAN 125 (338)
T ss_dssp C--CCCCTCEEEEEEETT
T ss_pred H--HHhhcCCCEEEEeec
Confidence 0 122345555555543
No 127
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=49.92 E-value=85 Score=25.64 Aligned_cols=72 Identities=10% Similarity=0.156 Sum_probs=44.9
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCC--EEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVD--RAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD--~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|++|+++ |.+|+++.-.+...++..+++...|.. ++..+..| -.|...+..++.++.++. ++|+++.-.
T Consensus 40 ~aia~~L~~~---G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~D-v~d~~~v~~~~~~~~~~~g~iD~lvnnA 114 (297)
T 1xhl_A 40 RSAAVIFAKE---GAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVAD-VTEASGQDDIINTTLAKFGKIDILVNNA 114 (297)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECC-TTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecC-CCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 4556777765 467777655443334444555555541 45555533 567888888888887776 589888754
No 128
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=49.85 E-value=22 Score=29.84 Aligned_cols=38 Identities=21% Similarity=0.272 Sum_probs=26.8
Q ss_pred HHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcccce
Q psy9408 69 LLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFA 112 (219)
Q Consensus 69 ~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v 112 (219)
.+.+.+++.+||+|++-.. ...+..+|.++|+|++...
T Consensus 98 ~l~~~l~~~~pD~Vi~~~~------~~~~~~~a~~~giP~v~~~ 135 (384)
T 2p6p_A 98 RMLDFSRAWRPDLIVGGTM------SYVAPLLALHLGVPHARQT 135 (384)
T ss_dssp HHHHHHHHHCCSEEEEETT------CTHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHhccCCcEEEECcc------hhhHHHHHHhcCCCEEEec
Confidence 3445567779999997432 2256678999999987554
No 129
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}
Probab=49.43 E-value=21 Score=29.29 Aligned_cols=69 Identities=12% Similarity=0.118 Sum_probs=46.3
Q ss_pred hHHHHHHHHhCCCCEE-----EEEecCC-----------CCCHH---HHHHHHHHHHHhc--CCCEEEEcccccCCCcCc
Q psy9408 37 CKEILQIAMAMGVDRA-----ILIETDT-----------ILQSL---SVAKLLQVIVKKE--NPQLVILGKQSIDSDNNQ 95 (219)
Q Consensus 37 ~~~~lr~~~a~GaD~v-----~~v~~~~-----------~~d~~---~~A~~la~~ik~~--~~dlVl~G~~s~d~~~~~ 95 (219)
+++.++.++..||.+. +.+.... ..+|. .+++.+++.+++. ++|+|+.... .+--
T Consensus 38 ~~~~a~~L~~~gav~~~~~g~F~L~SG~~Sp~Y~d~~~~l~~p~~~~~l~~~la~~i~~~~~~~DvIvg~~~----gGi~ 113 (243)
T 3dez_A 38 AKDIARDLLDIKAVYLKPEEPFTWASGIKSPIYTDNRITLSYPETRTLIENGFVETIKEAFPEVEVIAGTAT----AGIP 113 (243)
T ss_dssp HHHHHHHHHHHTSEEECTTSCEEC---CEESEEECTTGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEETT----TTHH
T ss_pred HHHHHHHHHHCCCEEEcCCCcEEeCCCCCCCEEEeCHHhccCHHHHHHHHHHHHHHHHhhCCCCCEEEEecC----chHH
Confidence 3667888888898885 3333221 12444 4566777777765 7898876554 2457
Q ss_pred HHHHHHHHcCCCcc
Q psy9408 96 TGQMLAALLNWPQA 109 (219)
Q Consensus 96 v~~~lA~~Lg~p~v 109 (219)
++..+|..|+.|++
T Consensus 114 ~A~~lA~~L~~p~~ 127 (243)
T 3dez_A 114 HGAIIADKMNLPLA 127 (243)
T ss_dssp HHHHHHHHTTCCEE
T ss_pred HHHHHHHHcCCCEE
Confidence 89999999999975
No 130
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=49.30 E-value=60 Score=25.70 Aligned_cols=74 Identities=14% Similarity=0.032 Sum_probs=42.2
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCC-CCCHHHHHHHHHHHHHhc-CCCEEEEccc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDT-ILQSLSVAKLLQVIVKKE-NPQLVILGKQ 87 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~-~~d~~~~A~~la~~ik~~-~~dlVl~G~~ 87 (219)
.+.|++|+++ |.+|+.+.-.....++..+++...|..++..+..|- ..|...+.+.+.++.++. ..|+++.-..
T Consensus 26 ~aia~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~nAg 101 (252)
T 3f1l_A 26 REAAMTYARY---GATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAG 101 (252)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHCSCCSEEEECCC
T ss_pred HHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhCCCCCEEEECCc
Confidence 3456677764 367766554433333444444444443444444331 367777888888777776 4898886543
No 131
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=49.02 E-value=1e+02 Score=24.63 Aligned_cols=72 Identities=11% Similarity=0.106 Sum_probs=42.4
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCC-CEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGV-DRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~Ga-D~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|.+|+++ |.+|+++.-.+...++..+++...|. .++..+..| -.|.+.+..++.++.++. ++|+|+.-.
T Consensus 46 ~~la~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D-l~~~~~v~~~~~~~~~~~g~iD~vi~~A 119 (279)
T 1xg5_A 46 AAVARALVQQ---GLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCD-LSNEEDILSMFSAIRSQHSGVDICINNA 119 (279)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECC-TTCHHHHHHHHHHHHHHHCCCSEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEec-CCCHHHHHHHHHHHHHhCCCCCEEEECC
Confidence 3456666664 36777665443333344444555554 455555533 457777777777777665 589888644
No 132
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=49.00 E-value=22 Score=30.08 Aligned_cols=40 Identities=20% Similarity=0.245 Sum_probs=28.8
Q ss_pred HHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCccccee
Q psy9408 68 KLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFAS 113 (219)
Q Consensus 68 ~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~ 113 (219)
..+.+++++.+||+|++-.. .-.+..+|.++|+|++....
T Consensus 120 ~~l~~~l~~~~pDvVv~~~~------~~~~~~aa~~~giP~v~~~~ 159 (412)
T 3otg_A 120 DELQPVIERLRPDLVVQEIS------NYGAGLAALKAGIPTICHGV 159 (412)
T ss_dssp HHHHHHHHHHCCSEEEEETT------CHHHHHHHHHHTCCEEEECC
T ss_pred HHHHHHHHhcCCCEEEECch------hhHHHHHHHHcCCCEEEecc
Confidence 56777888889999987421 12366778899999886543
No 133
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=48.90 E-value=1.2e+02 Score=25.32 Aligned_cols=70 Identities=17% Similarity=0.117 Sum_probs=43.4
Q ss_pred hHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCC--CEEEEcccccCCCcCcHHHHHHH-HcCCC
Q psy9408 37 CKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENP--QLVILGKQSIDSDNNQTGQMLAA-LLNWP 107 (219)
Q Consensus 37 ~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~--dlVl~G~~s~d~~~~~v~~~lA~-~Lg~p 107 (219)
..+.++.+..+|+|.+.+.+.-....|..+.+.+..+.+..+. ++.|--+.= +..+-.++-.+|+ ..|+-
T Consensus 152 ~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~l~~H~H-nd~Gla~AN~laA~~aGa~ 224 (293)
T 3ewb_X 152 LIEAVQTAIDAGATVINIPDTVGYTNPTEFGQLFQDLRREIKQFDDIIFASHCH-DDLGMATANALAAIENGAR 224 (293)
T ss_dssp HHHHHHHHHHTTCCEEEEECSSSCCCHHHHHHHHHHHHHHCTTGGGSEEEEECB-CTTSCHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHcCCCEEEecCCCCCCCHHHHHHHHHHHHHhcCCccCceEEEEeC-CCcChHHHHHHHHHHhCCC
Confidence 3456788899999987776644467999999988887766541 233322332 2233445555554 44443
No 134
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=48.82 E-value=51 Score=28.13 Aligned_cols=89 Identities=17% Similarity=0.029 Sum_probs=45.6
Q ss_pred HHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCC---------CCC-HHHHHHHHHHHHHh---
Q psy9408 10 AIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDT---------ILQ-SLSVAKLLQVIVKK--- 76 (219)
Q Consensus 10 Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~---------~~d-~~~~A~~la~~ik~--- 76 (219)
.+..|..|+++ |.+|+.++-+ ...+. .-+.|.+-.-+-.+.. ... .......+.+..+.
T Consensus 17 ~~~La~~L~~~---Gh~V~v~~~~--~~~~~---v~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 88 (404)
T 3h4t_A 17 LVALAARLREL---GADARMCLPP--DYVER---CAEVGVPMVPVGRAVRAGAREPGELPPGAAEVVTEVVAEWFDKVPA 88 (404)
T ss_dssp HHHHHHHHHHT---TCCEEEEECG--GGHHH---HHHTTCCEEECSSCSSGGGSCTTCCCTTCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHC---CCeEEEEeCH--HHHHH---HHHcCCceeecCCCHHHHhccccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45677778765 4788876633 33333 3346876543321110 000 11112222222221
Q ss_pred --cCCCEEEEcccccCCCcCcHHHHHHHHcCCCcc
Q psy9408 77 --ENPQLVILGKQSIDSDNNQTGQMLAALLNWPQA 109 (219)
Q Consensus 77 --~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~v 109 (219)
.+||+|+...... .+..+..+|+++|+|++
T Consensus 89 ~~~~pD~Vi~~~~~~---~~~~a~~~A~~lgiP~v 120 (404)
T 3h4t_A 89 AIEGCDAVVTTGLLP---AAVAVRSMAEKLGIPYR 120 (404)
T ss_dssp HHTTCSEEEEEECHH---HHHHHHHHHHHHTCCEE
T ss_pred HhcCCCEEEECCchh---hhhhhhhHHhhcCCCEE
Confidence 3799998643221 12233788999999988
No 135
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=48.72 E-value=18 Score=31.05 Aligned_cols=49 Identities=20% Similarity=0.142 Sum_probs=31.0
Q ss_pred HHHHHHHHhCCCCEEEEEecCC-CCCH-----HHHHHHHHHHHHhcCCCEEEEcccc
Q psy9408 38 KEILQIAMAMGVDRAILIETDT-ILQS-----LSVAKLLQVIVKKENPQLVILGKQS 88 (219)
Q Consensus 38 ~~~lr~~~a~GaD~v~~v~~~~-~~d~-----~~~A~~la~~ik~~~~dlVl~G~~s 88 (219)
++.++++-+.|+|-+|++.+-. ..|. +..+..||+.+ .+.|+||.|++-
T Consensus 197 ~~~v~~Lk~~g~D~II~l~H~G~~~d~~~~~~e~~~~~lA~~v--~giD~IigGHsH 251 (341)
T 3gve_A 197 NETIPKMKAEGADVIIALAHTGIEKQAQSSGAENAVFDLATKT--KGIDAIISGHQH 251 (341)
T ss_dssp HHHHHHHHHTTCSEEEEEECCCCCSSCCCTTCSSCHHHHHHHC--SCCCEEEECSSC
T ss_pred HHHHHHHHhcCCCEEEEEeccCccccccccccchhHHHHHhcC--CCCcEEEECCCC
Confidence 3455566678999999998643 2221 11223455444 479999999975
No 136
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=48.62 E-value=1e+02 Score=24.75 Aligned_cols=71 Identities=13% Similarity=0.075 Sum_probs=42.0
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~ 86 (219)
.+.|++|+++ |.+|+++...+...++..++....|.. +..+..| -.|.......+.++.+....|+++.-.
T Consensus 47 ~aia~~la~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D-v~~~~~~~~~~~~~~~~g~iD~lvnnA 117 (275)
T 4imr_A 47 AAIAEGLAGA---GAHVILHGVKPGSTAAVQQRIIASGGT-AQELAGD-LSEAGAGTDLIERAEAIAPVDILVINA 117 (275)
T ss_dssp HHHHHHHHHT---TCEEEEEESSTTTTHHHHHHHHHTTCC-EEEEECC-TTSTTHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEcCCHHHHHHHHHHHHhcCCe-EEEEEec-CCCHHHHHHHHHHHHHhCCCCEEEECC
Confidence 3456677765 367777666655555556666666644 3334333 345555666666665555688888644
No 137
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=48.58 E-value=91 Score=25.19 Aligned_cols=72 Identities=8% Similarity=0.197 Sum_probs=41.2
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCc-chHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNK-KCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~-~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|++|+++ |.+|+.+.-... ..++...++....-.++..+..| -.|...+.+++.++.++. ++|+++.-.
T Consensus 39 ~~ia~~la~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D-v~d~~~v~~~~~~~~~~~g~iD~lv~nA 112 (281)
T 3v2h_A 39 LAIARTLAKA---GANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPAD-MTKPSEIADMMAMVADRFGGADILVNNA 112 (281)
T ss_dssp HHHHHHHHHT---TCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCC-TTCHHHHHHHHHHHHHHTSSCSEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCC-CCCHHHHHHHHHHHHHHCCCCCEEEECC
Confidence 3456677765 356665544222 12233333333333455555533 567888888888887776 589888644
No 138
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*
Probab=48.26 E-value=14 Score=31.12 Aligned_cols=68 Identities=9% Similarity=0.043 Sum_probs=46.4
Q ss_pred hHHHHHHHHhCCCCEEEEEecCC-----CCC----HHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCC
Q psy9408 37 CKEILQIAMAMGVDRAILIETDT-----ILQ----SLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWP 107 (219)
Q Consensus 37 ~~~~lr~~~a~GaD~v~~v~~~~-----~~d----~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p 107 (219)
+.-.++.+-.+ +|+++.++-.. .++ ...-+..|++.+++.++++|+.... .+-..+..+|.+||.|
T Consensus 104 ak~vA~ll~~~-~d~vit~DlH~~~iq~ff~~pvd~l~~~~~la~~i~~~~~~vVV~pd~----Gg~~~A~~lA~~L~~p 178 (286)
T 3lrt_A 104 SQILTEIYSSY-SNSIATVDIHDEKTLSYSKVKFSDLHANDAIVRYYKNVDVDYVVSPDD----GGLARVADISAKLGKK 178 (286)
T ss_dssp HHHHHHHHHHT-CSEEEEESCSCGGGGGGCSSEEEEECCHHHHHHHHTTSCCSEEEESSS----SSHHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHH-hCeEEEecCChHHHhhhcCCcEEEeecHHHHHHHHHhcCCCEEEEECC----CccHHHHHHHHHhCCC
Confidence 33344555567 99999998532 122 2233577888888777777775443 4567899999999999
Q ss_pred cc
Q psy9408 108 QA 109 (219)
Q Consensus 108 ~v 109 (219)
++
T Consensus 179 ~~ 180 (286)
T 3lrt_A 179 HF 180 (286)
T ss_dssp EE
T ss_pred eE
Confidence 65
No 139
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=48.24 E-value=65 Score=25.54 Aligned_cols=60 Identities=8% Similarity=0.126 Sum_probs=40.4
Q ss_pred cEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcc
Q psy9408 25 KEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGK 86 (219)
Q Consensus 25 ~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~ 86 (219)
.+|.+|.--++++ ..++.|..+|..-. .++.....+...+-..+.+.+++.+||+|++-.
T Consensus 31 ~~I~~Vit~~~~~-~v~~~A~~~gIp~~-~~~~~~~~~~~~~~~~~~~~l~~~~~Dliv~a~ 90 (212)
T 3av3_A 31 ARVALLVCDRPGA-KVIERAARENVPAF-VFSPKDYPSKAAFESEILRELKGRQIDWIALAG 90 (212)
T ss_dssp EEEEEEEESSTTC-HHHHHHHHTTCCEE-ECCGGGSSSHHHHHHHHHHHHHHTTCCEEEESS
T ss_pred CeEEEEEeCCCCc-HHHHHHHHcCCCEE-EeCcccccchhhhHHHHHHHHHhcCCCEEEEch
Confidence 5777776654433 56677888898743 333222235666777788889999999999754
No 140
>3cf4_G Acetyl-COA decarboxylase/synthase epsilon subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=48.21 E-value=10 Score=29.09 Aligned_cols=46 Identities=20% Similarity=0.282 Sum_probs=28.8
Q ss_pred HHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCccccee
Q psy9408 68 KLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFAS 113 (219)
Q Consensus 68 ~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~ 113 (219)
+.+++.+++-+-=+|++|......+..+---.+|+++|+|+++...
T Consensus 25 ~~aa~~L~~AkrPvil~G~g~~~~~a~~~l~~lae~~~iPV~~t~~ 70 (170)
T 3cf4_G 25 EMAAKIISKAKRPLLMVGTLALDPELLDRVVKISKAANIPIAATGS 70 (170)
T ss_dssp HHHHHHHHHCSSEEEEECSTTCCHHHHHHHHHHHHHHTCCEEECTT
T ss_pred HHHHHHHHcCCCCEEEECCCccchhHHHHHHHHHHHhCCCEEECcc
Confidence 3344555554545777777654333344567899999999886543
No 141
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=47.96 E-value=90 Score=25.29 Aligned_cols=72 Identities=18% Similarity=0.224 Sum_probs=43.1
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEccc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGKQ 87 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~~ 87 (219)
.+.|++|+++ |.+|+++.-.....++..+++...|.. +..+..| -.|...+..++.++.++. ++|+++.-..
T Consensus 42 ~aia~~la~~---G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D-v~d~~~v~~~~~~~~~~~g~iD~lVnnAg 114 (283)
T 3v8b_A 42 RATALALAAD---GVTVGALGRTRTEVEEVADEIVGAGGQ-AIALEAD-VSDELQMRNAVRDLVLKFGHLDIVVANAG 114 (283)
T ss_dssp HHHHHHHHHT---TCEEEEEESSHHHHHHHHHHHTTTTCC-EEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhcCCc-EEEEEcc-CCCHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence 3456677765 367766554433334444444444543 4444433 467888888888888776 5898886443
No 142
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=47.83 E-value=1.1e+02 Score=24.79 Aligned_cols=70 Identities=11% Similarity=0.125 Sum_probs=40.8
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHH-HhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIA-MAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILG 85 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~-~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G 85 (219)
.+.|++|+++ |.+|+.+.-......+.+.+. -..|. ++..+..| -.|...+.+++.++.++. +.|+++.-
T Consensus 61 ~aia~~la~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D-v~d~~~v~~~~~~~~~~~g~iD~lvnn 132 (291)
T 3ijr_A 61 RAVSIAFAKE---GANIAIAYLDEEGDANETKQYVEKEGV-KCVLLPGD-LSDEQHCKDIVQETVRQLGSLNILVNN 132 (291)
T ss_dssp HHHHHHHHHT---TCEEEEEESSCHHHHHHHHHHHHTTTC-CEEEEESC-TTSHHHHHHHHHHHHHHHSSCCEEEEC
T ss_pred HHHHHHHHHC---CCEEEEEeCCchHHHHHHHHHHHhcCC-cEEEEECC-CCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 3456677765 367766554443222333333 33443 44444433 567888888888887776 58988864
No 143
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=47.62 E-value=1.1e+02 Score=25.69 Aligned_cols=80 Identities=14% Similarity=0.096 Sum_probs=42.6
Q ss_pred CCCCHhhHHHHHHHHHhhhhcCCCcEEEEEEec---Cc--chHHHHHHHHh--CCCCEEEEEecCCCCCHHHHHHHHHHH
Q psy9408 1 MSINPFDEIAIESAIRLRESSNKIKEIIAISCG---NK--KCKEILQIAMA--MGVDRAILIETDTILQSLSVAKLLQVI 73 (219)
Q Consensus 1 ~~iNp~D~~Ale~A~~l~e~~g~g~~V~av~~G---~~--~~~~~lr~~~a--~GaD~v~~v~~~~~~d~~~~A~~la~~ 73 (219)
|+.|+.+...+..-.++..+.| +..|++| +. --.+..++++. .|..-.++=.-|.-.|+. .+|.++
T Consensus 103 F~Ys~~E~~~M~~dI~~~~~~G----AdGvVfG~L~~dg~iD~~~~~~Li~~a~~l~vTFHRAFD~~~d~~---~Ale~L 175 (287)
T 3iwp_A 103 FLYSDREIEVMKADIRLAKLYG----ADGLVFGALTEDGHIDKELCMSLMAICRPLPVTFHRAFDMVHDPM---AALETL 175 (287)
T ss_dssp SCCCHHHHHHHHHHHHHHHHTT----CSEEEECCBCTTSCBCHHHHHHHHHHHTTSCEEECGGGGGCSCHH---HHHHHH
T ss_pred cccCHHHHHHHHHHHHHHHHcC----CCEEEEeeeCCCCCcCHHHHHHHHHHcCCCcEEEECchhccCCHH---HHHHHH
Confidence 6788888888887777777764 3556666 22 11233333332 233333331112223454 344444
Q ss_pred HHhcCCCEEEEcccc
Q psy9408 74 VKKENPQLVILGKQS 88 (219)
Q Consensus 74 ik~~~~dlVl~G~~s 88 (219)
+. .++|-||++.+.
T Consensus 176 i~-lGvdrILTSG~~ 189 (287)
T 3iwp_A 176 LT-LGFERVLTSGCD 189 (287)
T ss_dssp HH-HTCSEEEECTTS
T ss_pred HH-cCCCEEECCCCC
Confidence 43 478888887664
No 144
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=47.61 E-value=41 Score=28.44 Aligned_cols=62 Identities=16% Similarity=0.113 Sum_probs=42.3
Q ss_pred HhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-----CCCEEEEcccccCCCcCcHHHHHHHHcCCC
Q psy9408 45 MAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-----NPQLVILGKQSIDSDNNQTGQMLAALLNWP 107 (219)
Q Consensus 45 ~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-----~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p 107 (219)
-..|..+-++...+ ....+--+.+..+++++- +.|.|++|.++.|......+.+++.+||++
T Consensus 52 ~~tGi~~R~~~~~~-~~~~~La~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~ 118 (345)
T 3s21_A 52 DVAGIHARRLWDQD-VQASDAATQAARKALIDANIGIEKIGLLINTSVSRDYLEPSTASIVSGNLGVS 118 (345)
T ss_dssp HTTCCSEEEECSSC-CCHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCCSCSSSCHHHHHHHHHTCC
T ss_pred HhhCceeEEECCCC-CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCChHHHHHHHHhCCC
Confidence 34688887776532 223334444555555542 478999998887766667899999999987
No 145
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=47.59 E-value=89 Score=23.62 Aligned_cols=78 Identities=15% Similarity=0.181 Sum_probs=45.0
Q ss_pred cEEEEEEecCcc------hHHHHH-HHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEE-cccccCCCcCcH
Q psy9408 25 KEIIAISCGNKK------CKEILQ-IAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVIL-GKQSIDSDNNQT 96 (219)
Q Consensus 25 ~~V~av~~G~~~------~~~~lr-~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~-G~~s~d~~~~~v 96 (219)
-+|..++.|.+- .-..+. .+..+|++-....-- .-|.+.+.++|.++++..++|+||+ |.++.+ ..-.+
T Consensus 14 ~rv~Ii~tGdElg~i~Dsn~~~l~~~L~~~G~~v~~~~iv--~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g-~~D~t 90 (169)
T 1y5e_A 14 VRCKIVTISDTRTEETDKSGQLLHELLKEAGHKVTSYEIV--KDDKESIQQAVLAGYHKEDVDVVLTNGGTGIT-KRDVT 90 (169)
T ss_dssp CEEEEEEECSSCCTTTCHHHHHHHHHHHHHTCEEEEEEEE--CSSHHHHHHHHHHHHTCTTCSEEEEECCCSSS-TTCCH
T ss_pred CEEEEEEEcCccCeeccChHHHHHHHHHHCCCeEeEEEEe--CCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCC-CCCCc
Confidence 478888988752 112343 344578864432111 2356788888888876457897776 555544 32344
Q ss_pred HHHHHHHcC
Q psy9408 97 GQMLAALLN 105 (219)
Q Consensus 97 ~~~lA~~Lg 105 (219)
+..++..++
T Consensus 91 ~ea~~~~~~ 99 (169)
T 1y5e_A 91 IEAVSALLD 99 (169)
T ss_dssp HHHHHTTCS
T ss_pred HHHHHHHcC
Confidence 555554443
No 146
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=47.51 E-value=61 Score=27.70 Aligned_cols=61 Identities=16% Similarity=0.120 Sum_probs=43.8
Q ss_pred hCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-----CCCEEEEcccccCCCcCcHHHHHHHHcCCC
Q psy9408 46 AMGVDRAILIETDTILQSLSVAKLLQVIVKKE-----NPQLVILGKQSIDSDNNQTGQMLAALLNWP 107 (219)
Q Consensus 46 a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-----~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p 107 (219)
..|..+-++..++ ....+-.+.++.+++++- +.|.|++|.++.|......+.+++.+||++
T Consensus 65 ~tGI~~R~~a~~~-~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~ 130 (365)
T 3gwa_A 65 KTGIRERRIAAPR-ETAADLAYEAARKLFAQGAVGADQVDFVILCTQAPDYVLPTSACMLQHRLGIP 130 (365)
T ss_dssp HHCCCEEEECCTT-CCHHHHHHHHHHHHHHTTSCCGGGCCEEEEEESSCSCSBSCHHHHHHHHTTCC
T ss_pred hcCccEEEECCCC-CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCC
Confidence 4688887776533 333444455666666653 468999998887776677889999999998
No 147
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=47.49 E-value=97 Score=24.86 Aligned_cols=69 Identities=9% Similarity=-0.059 Sum_probs=40.4
Q ss_pred cEEEEEEecCcch-HHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHH
Q psy9408 25 KEIIAISCGNKKC-KEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAAL 103 (219)
Q Consensus 25 ~~V~av~~G~~~~-~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~ 103 (219)
.++..+.++.--. -+.+...+ |.|=.+..- .+.+..-..+. -+++.++++|+.|. +...+|.+
T Consensus 107 ~kIavVg~~~~~~~~~~i~~ll--~~~i~~~~~----~~~ee~~~~i~-~l~~~G~~vVVG~~---------~~~~~A~~ 170 (225)
T 2pju_A 107 SSIGVVTYQETIPALVAFQKTF--NLRLDQRSY----ITEEDARGQIN-ELKANGTEAVVGAG---------LITDLAEE 170 (225)
T ss_dssp SCEEEEEESSCCHHHHHHHHHH--TCCEEEEEE----SSHHHHHHHHH-HHHHTTCCEEEESH---------HHHHHHHH
T ss_pred CcEEEEeCchhhhHHHHHHHHh--CCceEEEEe----CCHHHHHHHHH-HHHHCCCCEEECCH---------HHHHHHHH
Confidence 5788887775421 12344454 444222211 12333334444 44557899999655 77899999
Q ss_pred cCCCcc
Q psy9408 104 LNWPQA 109 (219)
Q Consensus 104 Lg~p~v 109 (219)
+|+|.+
T Consensus 171 ~Gl~~v 176 (225)
T 2pju_A 171 AGMTGI 176 (225)
T ss_dssp TTSEEE
T ss_pred cCCcEE
Confidence 999954
No 148
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=47.42 E-value=96 Score=24.85 Aligned_cols=72 Identities=13% Similarity=0.170 Sum_probs=44.5
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCC--EEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVD--RAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD--~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|.+|+++ |.+|+++.-.+...++..+++...|.. ++..+..| -.|.+.+..++.++.++. .+|+++.-.
T Consensus 20 ~~ia~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D-v~~~~~v~~~~~~~~~~~g~iD~lv~nA 94 (280)
T 1xkq_A 20 RTTAILFAQE---GANVTITGRSSERLEETRQIILKSGVSEKQVNSVVAD-VTTEDGQDQIINSTLKQFGKIDVLVNNA 94 (280)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECC-TTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEec-CCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 4567777775 468877655443333444444444541 45555533 567888888888887776 489888654
No 149
>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=47.21 E-value=69 Score=27.81 Aligned_cols=74 Identities=15% Similarity=0.030 Sum_probs=41.1
Q ss_pred CCCHhhHHHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHH--HHHHHHHHhcCC
Q psy9408 2 SINPFDEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVA--KLLQVIVKKENP 79 (219)
Q Consensus 2 ~iNp~D~~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A--~~la~~ik~~~~ 79 (219)
++|. ...++..++.+++. |.+++++.-.+...... ..-+|+.+.+. +. +...|. ..|.+++++.++
T Consensus 7 I~g~-g~~~~~~~~a~~~~---G~~vv~v~~~~~~~~~~-----~~~ad~~~~~~-p~--~~~~~~d~~~l~~~~~~~~~ 74 (451)
T 1ulz_A 7 VANR-GEIAVRIIRACKEL---GIPTVAIYNEVESTARH-----VKLADEAYMIG-TD--PLDTYLNKQRIINLALEVGA 74 (451)
T ss_dssp ECCC-HHHHHHHHHHHHHH---TCCEEEEECGGGTTCHH-----HHHSSEEEECC-SS--TTHHHHCHHHHHHHHHHTTC
T ss_pred EECC-cHHHHHHHHHHHHc---CCeEEEEechhhcccch-----hhhCcEEEEcC-CC--cccccCCHHHHHHHHHHcCC
Confidence 3453 24566666666653 46777665322110011 11268877654 21 223333 678888888899
Q ss_pred CEEEEccc
Q psy9408 80 QLVILGKQ 87 (219)
Q Consensus 80 dlVl~G~~ 87 (219)
|+|+.|..
T Consensus 75 d~v~~~~g 82 (451)
T 1ulz_A 75 DAIHPGYG 82 (451)
T ss_dssp CEEECCSS
T ss_pred CEEEECCC
Confidence 99998853
No 150
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=47.21 E-value=1e+02 Score=24.28 Aligned_cols=71 Identities=13% Similarity=0.225 Sum_probs=42.5
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhC--CCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAM--GVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~--GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~ 86 (219)
.+.|.+|+++ |.+|+++.-.+...++..+++... |. ++..+..| -.|+..+..++.++.++.+.|+++.-.
T Consensus 21 ~~ia~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~D-~~~~~~v~~~~~~~~~~~gid~lv~~A 93 (260)
T 2z1n_A 21 FASALELARN---GARLLLFSRNREKLEAAASRIASLVSGA-QVDIVAGD-IREPGDIDRLFEKARDLGGADILVYST 93 (260)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHSTTC-CEEEEECC-TTCHHHHHHHHHHHHHTTCCSEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhcCCCC-eEEEEEcc-CCCHHHHHHHHHHHHHhcCCCEEEECC
Confidence 3556777765 467776654433233333333221 22 45555433 567888888888888877799888754
No 151
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=46.83 E-value=1.2e+02 Score=24.93 Aligned_cols=72 Identities=13% Similarity=0.140 Sum_probs=46.3
Q ss_pred HHHHHHhhhhcCCCcEEEEEEec----------CcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CC
Q psy9408 11 IESAIRLRESSNKIKEIIAISCG----------NKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NP 79 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G----------~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~ 79 (219)
.+.|++|+++ |.+|+++... ....++...++...|. ++..+..| -.|.+.+.+.+.++.++. ..
T Consensus 41 ~aia~~la~~---G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D-v~d~~~v~~~~~~~~~~~g~i 115 (322)
T 3qlj_A 41 RAHALAFAAE---GARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGG-EAVADGSN-VADWDQAAGLIQTAVETFGGL 115 (322)
T ss_dssp HHHHHHHHHT---TCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTC-EEEEECCC-TTSHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHC---CCEEEEEeCcccccccccccHHHHHHHHHHHHhcCC-cEEEEECC-CCCHHHHHHHHHHHHHHcCCC
Confidence 4567777775 4677766544 3344555666666664 45555433 567888888888888776 58
Q ss_pred CEEEEccc
Q psy9408 80 QLVILGKQ 87 (219)
Q Consensus 80 dlVl~G~~ 87 (219)
|+++.-..
T Consensus 116 D~lv~nAg 123 (322)
T 3qlj_A 116 DVLVNNAG 123 (322)
T ss_dssp CEEECCCC
T ss_pred CEEEECCC
Confidence 98886543
No 152
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=46.73 E-value=1.1e+02 Score=24.24 Aligned_cols=72 Identities=10% Similarity=0.054 Sum_probs=44.8
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc--CCCEEEEccc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE--NPQLVILGKQ 87 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~--~~dlVl~G~~ 87 (219)
.+.|.+|+++ |.+|+++.-.+...++..+++...|. ++..+..| -.|...+.+++.++.++. ++|+++.-..
T Consensus 23 ~~ia~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D-~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag 96 (260)
T 2ae2_A 23 YGIVEELASL---GASVYTCSRNQKELNDCLTQWRSKGF-KVEASVCD-LSSRSERQELMNTVANHFHGKLNILVNNAG 96 (260)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECC-TTCHHHHHHHHHHHHHHTTTCCCEEEECCC
T ss_pred HHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcC-CCCHHHHHHHHHHHHHHcCCCCCEEEECCC
Confidence 3456677765 46777765544333444444445554 45555533 567888888888888776 5898886543
No 153
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=46.63 E-value=56 Score=27.96 Aligned_cols=61 Identities=15% Similarity=0.205 Sum_probs=43.4
Q ss_pred hCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-----CCCEEEEcccccCCCcCcHHHHHHHHcCCC
Q psy9408 46 AMGVDRAILIETDTILQSLSVAKLLQVIVKKE-----NPQLVILGKQSIDSDNNQTGQMLAALLNWP 107 (219)
Q Consensus 46 a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-----~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p 107 (219)
..|.++-....++ ....+--+.++.+++++- +.|.|++|..+.+......+.+++.+||++
T Consensus 59 ~tGi~~R~~a~~~-~~~~~La~~Aa~~aL~~agl~~~dId~vi~~t~~~~~~~p~~a~~v~~~lGl~ 124 (359)
T 3h78_A 59 RTGVRTRYHVEPE-QAVSALMVPAARQAIEAAGLLPEDIDLLLVNTLSPDHHDPSQACLIQPLLGLR 124 (359)
T ss_dssp HHCCCEEEECCTT-CCTHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHHTCC
T ss_pred hcCceEEEEcCCC-CCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCC
Confidence 3488887765533 344455556666666653 468999998887666667899999999997
No 154
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=46.53 E-value=85 Score=24.74 Aligned_cols=73 Identities=8% Similarity=0.086 Sum_probs=43.9
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEccc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGKQ 87 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~~ 87 (219)
.+.|++|.++ |.+|+++.--.....+.+++.+...-.++..+..| -.|.+.+.+++.++.++. ++|+++.-..
T Consensus 21 ~~~a~~l~~~---G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D-l~~~~~v~~~~~~~~~~~g~id~lv~~Ag 94 (264)
T 3i4f_A 21 KQVTEKLLAK---GYSVTVTYHSDTTAMETMKETYKDVEERLQFVQAD-VTKKEDLHKIVEEAMSHFGKIDFLINNAG 94 (264)
T ss_dssp HHHHHHHHHT---TCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECC-TTSHHHHHHHHHHHHHHHSCCCEEECCCC
T ss_pred HHHHHHHHHC---CCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEec-CCCHHHHHHHHHHHHHHhCCCCEEEECCc
Confidence 4567777765 46777655444333344444433222445555533 567888888888887765 5898886554
No 155
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=46.51 E-value=79 Score=25.41 Aligned_cols=71 Identities=11% Similarity=0.035 Sum_probs=41.4
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHh-CCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMA-MGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a-~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|++|+++ |.+|+.+.-.....++..+++.. .|. ++..+..| -.|...+.+++.++.++. ..|+++.-.
T Consensus 41 ~aia~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D-v~~~~~v~~~~~~~~~~~g~id~lv~nA 113 (277)
T 4fc7_A 41 FRIAEIFMRH---GCHTVIASRSLPRVLTAARKLAGATGR-RCLPLSMD-VRAPPAVMAAVDQALKEFGRIDILINCA 113 (277)
T ss_dssp HHHHHHHHTT---TCEEEEEESCHHHHHHHHHHHHHHHSS-CEEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHHhcCC-cEEEEEcC-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 3456667664 35776655443333344444332 343 45555433 467788888888887776 589888654
No 156
>1vl2_A Argininosuccinate synthase; TM1780, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics, ligase; 1.65A {Thermotoga maritima} SCOP: c.26.2.1 d.210.1.1
Probab=46.23 E-value=40 Score=30.07 Aligned_cols=73 Identities=21% Similarity=0.134 Sum_probs=49.9
Q ss_pred HHHhhhhcCCCcEEEEEEecCc---chHHHHHHHHhCCCCEEEEEecCCC-------------------C-CHH-----H
Q psy9408 14 AIRLRESSNKIKEIIAISCGNK---KCKEILQIAMAMGVDRAILIETDTI-------------------L-QSL-----S 65 (219)
Q Consensus 14 A~~l~e~~g~g~~V~av~~G~~---~~~~~lr~~~a~GaD~v~~v~~~~~-------------------~-d~~-----~ 65 (219)
+..|+++ |.+|+++++--. +.+.+-+.|..+|+.+.++++-... | .+. .
T Consensus 31 a~~Lke~---G~eViavt~d~Gq~~Ele~A~~vA~~lGi~~~~VvDl~eef~~~v~~p~i~~na~yeg~Y~~g~~l~Rp~ 107 (421)
T 1vl2_A 31 LKWLCEK---GFDVIAYVANVGQKDDFVAIKEKALKTGASKVYVEDLRREFVTDYIFTALLGNAMYEGRYLLGTAIARPL 107 (421)
T ss_dssp HHHHHHT---TCEEEEEEEESSCCCCHHHHHHHHHHHTCSEEEEEECHHHHHHHTHHHHHTTTCCBTTTBCCHHHHHHHH
T ss_pred HHHHHHC---CCeEEEEEEEcCCHHHHHHHHHHHHHcCCceEEEEecHHHHHHhhhhHHHhcCCcccCceeCCCcccHHH
Confidence 3445665 479999998643 3566677789999987777763210 1 111 1
Q ss_pred HHHHHHHHHHhcCCCEEEEccccc
Q psy9408 66 VAKLLQVIVKKENPQLVILGKQSI 89 (219)
Q Consensus 66 ~A~~la~~ik~~~~dlVl~G~~s~ 89 (219)
.+..+.+++++.+.|.|..|++..
T Consensus 108 i~~~l~~~A~~~Gad~IA~G~~~k 131 (421)
T 1vl2_A 108 IAKRQVEIAEKEGAQYVAHGATGK 131 (421)
T ss_dssp HHHHHHHHHHHHTCSEEECCCCTT
T ss_pred HHHHHHHHHHHcCCCEEEECCeeC
Confidence 346677888889999999999974
No 157
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=46.11 E-value=56 Score=23.05 Aligned_cols=64 Identities=16% Similarity=0.093 Sum_probs=42.1
Q ss_pred hHHHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc
Q psy9408 7 DEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE 77 (219)
Q Consensus 7 D~~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~ 77 (219)
+...++...+|++.. +...|++++-. ...+....++..|++..+. . .++......+|..+++..
T Consensus 73 ~~~g~~~~~~l~~~~-~~~~ii~~s~~--~~~~~~~~~~~~g~~~~l~-K---p~~~~~l~~~i~~~~~~~ 136 (152)
T 3eul_A 73 GMDGAQVAAAVRSYE-LPTRVLLISAH--DEPAIVYQALQQGAAGFLL-K---DSTRTEIVKAVLDCAKGR 136 (152)
T ss_dssp SSCHHHHHHHHHHTT-CSCEEEEEESC--CCHHHHHHHHHTTCSEEEE-T---TCCHHHHHHHHHHHHHCC
T ss_pred CCCHHHHHHHHHhcC-CCCeEEEEEcc--CCHHHHHHHHHcCCCEEEe-c---CCCHHHHHHHHHHHHcCC
Confidence 344566777777653 34456555533 3356778899999996443 3 467788888888887654
No 158
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=45.97 E-value=47 Score=23.45 Aligned_cols=64 Identities=13% Similarity=0.177 Sum_probs=42.8
Q ss_pred hHHHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc
Q psy9408 7 DEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE 77 (219)
Q Consensus 7 D~~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~ 77 (219)
|...++...+|++.. ....+++++-.. ..+....++..|++..+. . .++.......|..+++..
T Consensus 78 ~~~g~~~~~~l~~~~-~~~~ii~ls~~~--~~~~~~~~~~~g~~~~l~-K---p~~~~~l~~~i~~~~~~~ 141 (150)
T 4e7p_A 78 VKTGLEVLEWIRSEK-LETKVVVVTTFK--RAGYFERAVKAGVDAYVL-K---ERSIADLMQTLHTVLEGR 141 (150)
T ss_dssp SSCHHHHHHHHHHTT-CSCEEEEEESCC--CHHHHHHHHHTTCSEEEE-T---TSCHHHHHHHHHHHHTTC
T ss_pred CCcHHHHHHHHHHhC-CCCeEEEEeCCC--CHHHHHHHHHCCCcEEEe-c---CCCHHHHHHHHHHHHcCC
Confidence 345677777888763 345666555433 356778899999996544 2 467888888888777643
No 159
>2qt7_A Receptor-type tyrosine-protein phosphatase-like N; IA-2, ICA-512, protein-tyrosine phosphatase, transmembrane protein, diabetes, autoimmunity; 1.30A {Homo sapiens} PDB: 3n01_A 3np5_A 3ng8_A 3n4w_A
Probab=45.86 E-value=22 Score=24.84 Aligned_cols=40 Identities=8% Similarity=0.076 Sum_probs=25.9
Q ss_pred CCCEEEEcccccCC-CcCcHHHHHHHHcCCCcccceeEEEEe
Q psy9408 78 NPQLVILGKQSIDS-DNNQTGQMLAALLNWPQATFASKIVLK 118 (219)
Q Consensus 78 ~~dlVl~G~~s~d~-~~~~v~~~lA~~Lg~p~vt~v~~l~~~ 118 (219)
+|-.|+++...... +|.++--.||++|++|.- .-+++++.
T Consensus 3 eygYI~~~~~~ls~~eG~~l~~~la~ll~l~~~-~Ft~i~V~ 43 (91)
T 2qt7_A 3 EYGYIVTDQKPLSLAAGVKLLEILAEHVHMSSG-SFINISVV 43 (91)
T ss_dssp CEEEEEESCTTCCHHHHHHHHHHHHHHHTSCGG-GEEEEEEE
T ss_pred eeEEEEecCCCCCHHHHHHHHHHHHHHhcCCcc-ceeeeEee
Confidence 35566765544322 578899999999999943 33444444
No 160
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=45.83 E-value=65 Score=27.00 Aligned_cols=61 Identities=13% Similarity=0.121 Sum_probs=42.1
Q ss_pred hCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-----CCCEEEEcccccCCCcCcHHHHHHHHcCCC
Q psy9408 46 AMGVDRAILIETDTILQSLSVAKLLQVIVKKE-----NPQLVILGKQSIDSDNNQTGQMLAALLNWP 107 (219)
Q Consensus 46 a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-----~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p 107 (219)
..|..+-.+...+ ....+--+.+..+++++- +.|.|++|.++.+......+.+++.+||++
T Consensus 43 ~tGi~~R~~a~~~-~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~ 108 (323)
T 3il3_A 43 RSGIRERRIAAED-ETVATMGFEAAKNAIEAAQINPQDIELIIVATTSHSHAYPSAACQVQGLLNID 108 (323)
T ss_dssp HTCCCEEECCCTT-CCHHHHHHHHHHHHHHHHCCCGGGCCEEEEECSCCSCSSSCHHHHHHHHTTCS
T ss_pred hcCCcEEEECCCC-CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCccHHHHHHHHhCCC
Confidence 4688887765432 233334445555566543 468999999887766667899999999996
No 161
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=45.70 E-value=97 Score=24.89 Aligned_cols=71 Identities=11% Similarity=0.081 Sum_probs=41.4
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|++|+++ |.+|+++.-.....++..+++...|..-. .+..| -.|...+...+.++.++. +.|+++.-.
T Consensus 42 ~aia~~la~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D-v~d~~~v~~~~~~~~~~~g~iD~lvnnA 113 (270)
T 3ftp_A 42 RAIALELARR---GAMVIGTATTEAGAEGIGAAFKQAGLEGR-GAVLN-VNDATAVDALVESTLKEFGALNVLVNNA 113 (270)
T ss_dssp HHHHHHHHHT---TCEEEEEESSHHHHHHHHHHHHHHTCCCE-EEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEEe-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 3456677765 35776655443333444444445554432 22222 467788888888887776 489888654
No 162
>3rxy_A NIF3 protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, NIF3 superfamily, unknown function; 2.00A {Sphaerobacter thermophilus}
Probab=45.62 E-value=17 Score=30.57 Aligned_cols=72 Identities=15% Similarity=0.147 Sum_probs=44.6
Q ss_pred EEEEec--CcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCCcC-cHHHHHHHHc
Q psy9408 28 IAISCG--NKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNN-QTGQMLAALL 104 (219)
Q Consensus 28 ~av~~G--~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~-~v~~~lA~~L 104 (219)
++|.+| .....+.++++.+.|+|-.+.-+- ....| ....++.+-.+|++|+.+++.-|- .++..|. ..
T Consensus 198 IaV~~GgGtsG~~~~i~~a~~~GvDt~ITGe~----~~~~~----~~~A~E~ginVI~AGHyATEt~Gv~aL~~~Le-~~ 268 (278)
T 3rxy_A 198 IAVVHGAGTNGGYAVARAYFDHGVRTVLYIHI----APEEA----ERLRREGGGNLIVTGHIASDLVGINRYVQALE-ER 268 (278)
T ss_dssp EEECCSSSSCCHHHHHHHHHHTTCCEEEESCC----CHHHH----HHHHHHCSSEEEECCHHHHHHHHHHHHHHHHH-HT
T ss_pred EEEEcCCCCCCcHHHHHHHHHcCCCEEEEecC----chHHH----HHHHHHcCCeEEEeccchHhHHHHHHHHHHHH-Hc
Confidence 455565 223568899999999998777442 22222 234556789999999998775322 2333333 45
Q ss_pred CCCc
Q psy9408 105 NWPQ 108 (219)
Q Consensus 105 g~p~ 108 (219)
|.+.
T Consensus 269 Glev 272 (278)
T 3rxy_A 269 GVEV 272 (278)
T ss_dssp TCEE
T ss_pred CCee
Confidence 5553
No 163
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=45.36 E-value=60 Score=26.26 Aligned_cols=70 Identities=14% Similarity=0.144 Sum_probs=39.4
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|.+|+++ |.+|+++.-.+...++..+++...| ++..+..| -.|.+.+.+++.++.++. ++|+++.-.
T Consensus 43 ~aia~~L~~~---G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~D-v~d~~~v~~~~~~~~~~~g~iD~lvnnA 113 (276)
T 2b4q_A 43 QMIAQGLLEA---GARVFICARDAEACADTATRLSAYG--DCQAIPAD-LSSEAGARRLAQALGELSARLDILVNNA 113 (276)
T ss_dssp HHHHHHHHHT---TCEEEEECSCHHHHHHHHHHHTTSS--CEEECCCC-TTSHHHHHHHHHHHHHHCSCCSEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhcC--ceEEEEee-CCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 3456667664 3576665433322233333333334 44444433 457777778777777765 589888654
No 164
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=45.34 E-value=62 Score=26.65 Aligned_cols=71 Identities=17% Similarity=0.095 Sum_probs=40.3
Q ss_pred EEEEecCcc---------hHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHH
Q psy9408 28 IAISCGNKK---------CKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQ 98 (219)
Q Consensus 28 ~av~~G~~~---------~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~ 98 (219)
++|.+|+.+ +...++.+-..|.+ ++.++.... .. ..+++.++|+|+.......+..+.+ +
T Consensus 16 v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~-v~~i~~~~~-~~--------~~l~~~~~D~v~~~~hg~~ge~~~~-~ 84 (317)
T 4eg0_A 16 VAVLFGGESAEREVSLTSGRLVLQGLRDAGID-AHPFDPAER-PL--------SALKDEGFVRAFNALHGGYGENGQI-Q 84 (317)
T ss_dssp EEEECCCSSTTHHHHHHHHHHHHHHHHHTTCE-EEEECTTTS-CT--------THHHHTTCCEEEECCCSGGGTSSHH-H
T ss_pred EEEEECCCCCcceeeHHHHHHHHHHHHHCCCE-EEEEeCCCc-hH--------HHhhhcCCCEEEEcCCCCCCchHHH-H
Confidence 566777543 33445556667875 566663222 11 1234568898887655444444444 4
Q ss_pred HHHHHcCCCcc
Q psy9408 99 MLAALLNWPQA 109 (219)
Q Consensus 99 ~lA~~Lg~p~v 109 (219)
.+.+.+|+|++
T Consensus 85 ~~le~~gip~~ 95 (317)
T 4eg0_A 85 GALDFYGIRYT 95 (317)
T ss_dssp HHHHHHTCEES
T ss_pred HHHHHcCCCee
Confidence 56677787776
No 165
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=45.26 E-value=73 Score=21.95 Aligned_cols=63 Identities=14% Similarity=0.022 Sum_probs=43.8
Q ss_pred HHHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc
Q psy9408 8 EIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE 77 (219)
Q Consensus 8 ~~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~ 77 (219)
...++...+|++.. +...++.++--. ..+...+++..|++..+. . .++.......|.++.+..
T Consensus 65 ~~g~~~~~~l~~~~-~~~~ii~~s~~~--~~~~~~~~~~~ga~~~l~-K---P~~~~~l~~~i~~~~~~~ 127 (136)
T 3kto_A 65 DSGIELLETLVKRG-FHLPTIVMASSS--DIPTAVRAMRASAADFIE-K---PFIEHVLVHDVQQIINGA 127 (136)
T ss_dssp THHHHHHHHHHHTT-CCCCEEEEESSC--CHHHHHHHHHTTCSEEEE-S---SBCHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHhCC-CCCCEEEEEcCC--CHHHHHHHHHcChHHhee-C---CCCHHHHHHHHHHHHhcc
Confidence 67788888888764 345566555333 356678899999997443 3 478888888888877654
No 166
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=45.24 E-value=7.4 Score=29.61 Aligned_cols=44 Identities=16% Similarity=0.259 Sum_probs=30.0
Q ss_pred HHHHHHHHHHhcCCCEEEEc-----ccccCCCc---CcHHHHHHHHcCCCcc
Q psy9408 66 VAKLLQVIVKKENPQLVILG-----KQSIDSDN---NQTGQMLAALLNWPQA 109 (219)
Q Consensus 66 ~A~~la~~ik~~~~dlVl~G-----~~s~d~~~---~~v~~~lA~~Lg~p~v 109 (219)
....|.+++++++|+.|++| +.+.+..+ +.++-+|+.+.++|++
T Consensus 43 ~~~~l~~li~~~~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~ 94 (150)
T 1vhx_A 43 GLSRLSELIKDYTIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVV 94 (150)
T ss_dssp CHHHHHHHHTTSEEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEE
T ss_pred HHHHHHHHHHHcCCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEE
Confidence 35788999999999999999 44432222 2344567777777754
No 167
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=45.11 E-value=64 Score=22.88 Aligned_cols=74 Identities=12% Similarity=0.053 Sum_probs=42.5
Q ss_pred HHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCC--CCC-HHHHHHHHHHHHHhcCCCEEEE
Q psy9408 10 AIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDT--ILQ-SLSVAKLLQVIVKKENPQLVIL 84 (219)
Q Consensus 10 Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~--~~d-~~~~A~~la~~ik~~~~dlVl~ 84 (219)
.-..+.++++.. ....+.-+-++.++.++.++++.+.|+++++++.-=- +.- .......+.++-++.+.++.++
T Consensus 24 ~~~l~~~l~~~~-~~V~~a~le~~~P~l~~~l~~l~~~G~~~vvvvPlfl~~G~H~~~Dip~~~~~~~~~~~~~i~~~ 100 (126)
T 3lyh_A 24 FEKLAEPTVESI-ENAAIAYMELAEPSLDTIVNRAKGQGVEQFTVVPLFLAAGRHLRKDVPAMIERLEAEHGVTIRLA 100 (126)
T ss_dssp HHHHHHHHHHHS-TTCEEEESSSSSSBHHHHHHHHHHTTCCEEEEEECCSCCCHHHHHHHHHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHhhc-CCEEEEEEeCCCCCHHHHHHHHHHcCCCEEEEEecccCCCchhhhHHHHHHHHHHHHhCceEEEc
Confidence 344555666654 2233333444677789999999999999999987421 111 1233344444433345565553
No 168
>4f06_A Extracellular ligand-binding receptor; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: MSE PHB; 1.30A {Rhodopseudomonas palustris} PDB: 4evs_A*
Probab=44.99 E-value=21 Score=30.08 Aligned_cols=55 Identities=15% Similarity=0.010 Sum_probs=37.1
Q ss_pred EecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcccce
Q psy9408 55 IETDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFA 112 (219)
Q Consensus 55 v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v 112 (219)
+.|+...||........+++.+.+.+.|+-+.+|. ...-...+++..++|+++..
T Consensus 49 ~~D~~~~~p~~a~~~a~~Li~~d~V~aiiG~~~S~---~~~a~~~~~~~~~vp~i~~~ 103 (371)
T 4f06_A 49 YRDEVSPNPAQSKALAQELIVKEKVQYLAGLYFTP---NAMAVAPLLQEAKVPMVVMN 103 (371)
T ss_dssp EEECCSSCHHHHHHHHHHHHHTSCCSEEEECCSHH---HHHHHGGGHHHHTCCEEESS
T ss_pred EEcCCCCCHHHHHHHHHHHHhcCCCEEEEeccccc---chHHHHHHHHhhcCCccccc
Confidence 34444568887777777888888888888666552 12233446778899988653
No 169
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=44.90 E-value=1.2e+02 Score=24.38 Aligned_cols=71 Identities=13% Similarity=0.147 Sum_probs=42.7
Q ss_pred HHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEccc
Q psy9408 12 ESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGKQ 87 (219)
Q Consensus 12 e~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~~ 87 (219)
+.|++|+++ |.+|+.+.-.....++..++....|.. +..+..| -.|...+.+.+.++.++. +.|+++.-..
T Consensus 47 aia~~la~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D-l~d~~~v~~~~~~~~~~~g~iD~lvnnAg 118 (276)
T 3r1i_A 47 KVALAYAEA---GAQVAVAARHSDALQVVADEIAGVGGK-ALPIRCD-VTQPDQVRGMLDQMTGELGGIDIAVCNAG 118 (276)
T ss_dssp HHHHHHHHT---TCEEEEEESSGGGGHHHHHHHHHTTCC-CEEEECC-TTCHHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred HHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhcCCe-EEEEEcC-CCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 456666664 356666655544445555555555543 3333322 457777888888877775 5898886543
No 170
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=44.60 E-value=57 Score=27.71 Aligned_cols=61 Identities=18% Similarity=0.143 Sum_probs=42.9
Q ss_pred hCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-----CCCEEEEcccccCCCcCcHHHHHHHHcCCC
Q psy9408 46 AMGVDRAILIETDTILQSLSVAKLLQVIVKKE-----NPQLVILGKQSIDSDNNQTGQMLAALLNWP 107 (219)
Q Consensus 46 a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-----~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p 107 (219)
..|..+-++..++ ....+--+.+..+++++- +.|.|++|.++.|......+.+++.+||+|
T Consensus 51 ~tGI~~R~~a~~~-~~~~~La~~Aa~~aL~~agi~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~ 116 (354)
T 4efi_A 51 MIGVNRRRWADAQ-TSAGDLCRKAGEKLLAGLGWQADSIDALIFVSQTPNYRLPATAFVLQAELDLP 116 (354)
T ss_dssp HHCCSEEECCCTT-CCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCC
T ss_pred hcCCeEEEEcCCC-CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCcC
Confidence 5688888776533 223334445555555542 478999998887777778999999999996
No 171
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=44.52 E-value=1.3e+02 Score=24.55 Aligned_cols=73 Identities=10% Similarity=0.081 Sum_probs=44.9
Q ss_pred HHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEccc
Q psy9408 10 AIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGKQ 87 (219)
Q Consensus 10 Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~~ 87 (219)
..+.|.+|+++ |.+|+.+.-.....++..+++-..|.+ +..+..| -.|...+.+++.++.++. ++|+++.-..
T Consensus 44 G~~la~~l~~~---G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D-v~d~~~v~~~~~~~~~~~g~id~lvnnAg 117 (301)
T 3tjr_A 44 GLATATEFARR---GARLVLSDVDQPALEQAVNGLRGQGFD-AHGVVCD-VRHLDEMVRLADEAFRLLGGVDVVFSNAG 117 (301)
T ss_dssp HHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCC-EEEEECC-TTCHHHHHHHHHHHHHHHSSCSEEEECCC
T ss_pred HHHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCCc-eEEEEcc-CCCHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence 34566777765 467776655544444455555556654 3333323 467778888888777765 5898886554
No 172
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=44.46 E-value=68 Score=25.67 Aligned_cols=59 Identities=12% Similarity=0.118 Sum_probs=40.3
Q ss_pred cEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcc
Q psy9408 25 KEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGK 86 (219)
Q Consensus 25 ~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~ 86 (219)
.+|.+|.--++ ...++.|..+|..-... +.....+-..+-..+.+.+++.+||+|++-.
T Consensus 39 ~eI~~Vis~~~--a~~~~~A~~~gIp~~~~-~~~~~~~r~~~d~~~~~~l~~~~~Dlivlag 97 (215)
T 3da8_A 39 ARVVAVGVDRE--CRAAEIAAEASVPVFTV-RLADHPSRDAWDVAITAATAAHEPDLVVSAG 97 (215)
T ss_dssp EEEEEEEESSC--CHHHHHHHHTTCCEEEC-CGGGSSSHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred CeEEEEEeCCc--hHHHHHHHHcCCCEEEe-CcccccchhhhhHHHHHHHHhhCCCEEEEcC
Confidence 58877766554 35677888999875433 3211234556667788899999999998754
No 173
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=44.45 E-value=1.1e+02 Score=23.84 Aligned_cols=72 Identities=11% Similarity=0.089 Sum_probs=46.0
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEccc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGKQ 87 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~~ 87 (219)
.+.|++|+++ |.+|+++.-.....++..+++...|. ++..+..| -.|...+.+.+.++.++. ++|+++.-..
T Consensus 23 ~~~a~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D-~~~~~~~~~~~~~~~~~~g~id~li~~Ag 95 (253)
T 3qiv_A 23 QAYAEALARE---GAAVVVADINAEAAEAVAKQIVADGG-TAISVAVD-VSDPESAKAMADRTLAEFGGIDYLVNNAA 95 (253)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECC-TTSHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHC---CCEEEEEcCCHHHHHHHHHHHHhcCC-cEEEEEcc-CCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 4567778775 46777765544444445555555554 45555533 567788888888777775 6899887553
No 174
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=43.98 E-value=66 Score=26.83 Aligned_cols=58 Identities=17% Similarity=0.274 Sum_probs=25.9
Q ss_pred HHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEE
Q psy9408 15 IRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVIL 84 (219)
Q Consensus 15 ~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~ 84 (219)
.+++...| +.+|+++...+ +-+..+..+|+|.++.-. . ...+.+.++....++|+||=
T Consensus 188 ~qla~~~g-~~~Vi~~~~~~----~~~~~~~~lGa~~~i~~~---~----~~~~~v~~~t~g~g~d~v~d 245 (345)
T 3jv7_A 188 IQILRAVS-AARVIAVDLDD----DRLALAREVGADAAVKSG---A----GAADAIRELTGGQGATAVFD 245 (345)
T ss_dssp HHHHHHHC-CCEEEEEESCH----HHHHHHHHTTCSEEEECS---T----THHHHHHHHHGGGCEEEEEE
T ss_pred HHHHHHcC-CCEEEEEcCCH----HHHHHHHHcCCCEEEcCC---C----cHHHHHHHHhCCCCCeEEEE
Confidence 34444332 34555544322 223344556666644311 1 12344444444446777773
No 175
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=43.93 E-value=69 Score=27.82 Aligned_cols=68 Identities=18% Similarity=0.014 Sum_probs=39.3
Q ss_pred HHHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCC---CC-CHHHHHHHHHHHHHhcCCCEEE
Q psy9408 8 EIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDT---IL-QSLSVAKLLQVIVKKENPQLVI 83 (219)
Q Consensus 8 ~~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~---~~-d~~~~A~~la~~ik~~~~dlVl 83 (219)
..++..++.+++. |.+++++.-.+....... .-+|+.+.+.... .+ |. ..|.+++++.++|+|+
T Consensus 11 ~~~~~i~~a~~~~---G~~vv~v~~~~~~~~~~~-----~~ad~~~~i~~~~~~~~~~d~----~~l~~~~~~~~~d~v~ 78 (451)
T 2vpq_A 11 EIAVRIIRACRDL---GIQTVAIYSEGDKDALHT-----QIADEAYCVGPTLSKDSYLNI----PNILSIATSTGCDGVH 78 (451)
T ss_dssp HHHHHHHHHHHHT---TCEEEEEEEGGGTTCHHH-----HHSSEEEEEECSSGGGTTTCH----HHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHc---CCEEEEEecccccccchh-----hhCCEEEEcCCCCccccccCH----HHHHHHHHHcCCCEEE
Confidence 4566666666653 467877754322100111 1268888875211 22 33 4566778888999999
Q ss_pred Eccc
Q psy9408 84 LGKQ 87 (219)
Q Consensus 84 ~G~~ 87 (219)
.|..
T Consensus 79 ~~~g 82 (451)
T 2vpq_A 79 PGYG 82 (451)
T ss_dssp CCSS
T ss_pred ECCC
Confidence 8843
No 176
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...
Probab=43.91 E-value=58 Score=28.33 Aligned_cols=93 Identities=10% Similarity=0.002 Sum_probs=49.1
Q ss_pred CCCHhhHHHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecC---CCC-CHHHHHHHHHHHHHhc
Q psy9408 2 SINPFDEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETD---TIL-QSLSVAKLLQVIVKKE 77 (219)
Q Consensus 2 ~iNp~D~~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~---~~~-d~~~~A~~la~~ik~~ 77 (219)
++|. ...++..++.+++. |.+++++.-.+... ... ..-+|+.+.+... ..+ |. ..|.+++++.
T Consensus 7 I~g~-g~~~~~~~~a~~~~---G~~vv~v~~~~~~~-~~~----~~~ad~~~~~~p~~~~~~~~d~----~~l~~~~~~~ 73 (449)
T 2w70_A 7 IANR-GEIALRILRACKEL---GIKTVAVHSSADRD-LKH----VLLADETVCIGPAPSVKSYLNI----PAIISAAEIT 73 (449)
T ss_dssp ECCC-HHHHHHHHHHHHHH---TCEEEEEEEGGGTT-CHH----HHHSSEEEEEECSSGGGTTTCH----HHHHHHHHHH
T ss_pred EeCC-cHHHHHHHHHHHHc---CCeEEEEecccccc-Cch----hhhCCEEEEcCCCCccccccCH----HHHHHHHHHc
Confidence 4554 25566666666664 47887775432210 111 1126888877411 122 33 4566777888
Q ss_pred CCCEEEEcccccCCCcCcHHHHHHHHcCCCcc
Q psy9408 78 NPQLVILGKQSIDSDNNQTGQMLAALLNWPQA 109 (219)
Q Consensus 78 ~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~v 109 (219)
++|+|+.|......+ ..+ ..+.+.+|+|++
T Consensus 74 ~~d~v~~~~g~~~e~-~~~-~~~~e~~gi~~~ 103 (449)
T 2w70_A 74 GAVAIHPGYGFLSEN-ANF-AEQVERSGFIFI 103 (449)
T ss_dssp TCCEEECCSSTTTTC-HHH-HHHHHHTTCEES
T ss_pred CCCEEEECCCCcccC-HHH-HHHHHHcCCceE
Confidence 999999885321111 122 344455666643
No 177
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=43.56 E-value=1e+02 Score=24.32 Aligned_cols=71 Identities=13% Similarity=0.123 Sum_probs=43.8
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|++|+++ |.+|+++.-.....++...++-..|. ++..+..| -.|...+.+++.++.++. +.|+++.-.
T Consensus 20 ~aia~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D-v~~~~~v~~~~~~~~~~~g~id~lv~nA 91 (257)
T 3imf_A 20 KGMATRFAKE---GARVVITGRTKEKLEEAKLEIEQFPG-QILTVQMD-VRNTDDIQKMIEQIDEKFGRIDILINNA 91 (257)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHCCSTT-CEEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcc-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 4567778775 46777655444333344444434454 45555533 567888888888887775 589888644
No 178
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=43.56 E-value=25 Score=30.47 Aligned_cols=78 Identities=18% Similarity=0.294 Sum_probs=44.8
Q ss_pred EEEEEEecCcchHHHHHHHHh--CCCCE-EEEEecCCCCCHHHHHHHHH---HHHHhcCCCEEEE-cccccCCCcCcHHH
Q psy9408 26 EIIAISCGNKKCKEILQIAMA--MGVDR-AILIETDTILQSLSVAKLLQ---VIVKKENPQLVIL-GKQSIDSDNNQTGQ 98 (219)
Q Consensus 26 ~V~av~~G~~~~~~~lr~~~a--~GaD~-v~~v~~~~~~d~~~~A~~la---~~ik~~~~dlVl~-G~~s~d~~~~~v~~ 98 (219)
+...+.-|.. -+..+.+.+. +|.++ -+.++.+...-...++..+. +++++.+||+|++ |.+. ..++.
T Consensus 37 ~~~~~~tgqh-~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~kPD~Vlv~gd~~-----~~~aa 110 (385)
T 4hwg_A 37 KHILVHTGQN-YAYELNQVFFDDMGIRKPDYFLEVAADNTAKSIGLVIEKVDEVLEKEKPDAVLFYGDTN-----SCLSA 110 (385)
T ss_dssp EEEEEECSCH-HHHHHTHHHHC-CCCCCCSEECCCCCCCSHHHHHHHHHHHHHHHHHHCCSEEEEESCSG-----GGGGH
T ss_pred CEEEEEeCCC-CChhHHHHHHhhCCCCCCceecCCCCCCHHHHHHHHHHHHHHHHHhcCCcEEEEECCch-----HHHHH
Confidence 5666666754 2334555332 34422 23344333334666666654 5577889998876 3332 23557
Q ss_pred HHHHHcCCCcc
Q psy9408 99 MLAALLNWPQA 109 (219)
Q Consensus 99 ~lA~~Lg~p~v 109 (219)
..|.++|+|++
T Consensus 111 laA~~~~IPv~ 121 (385)
T 4hwg_A 111 IAAKRRKIPIF 121 (385)
T ss_dssp HHHHHTTCCEE
T ss_pred HHHHHhCCCEE
Confidence 78889999965
No 179
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=43.53 E-value=35 Score=28.57 Aligned_cols=36 Identities=22% Similarity=0.292 Sum_probs=26.5
Q ss_pred HHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcccc
Q psy9408 70 LQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATF 111 (219)
Q Consensus 70 la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~ 111 (219)
+.+.+++.+||+|+..... -.++.+|.++|+|++..
T Consensus 120 l~~~~~~~~pD~Vv~d~~~------~~~~~~A~~~gip~~~~ 155 (400)
T 4amg_A 120 ALRTARSWRPDLVVHTPTQ------GAGPLTAAALQLPCVEL 155 (400)
T ss_dssp HHHHHHHHCCSEEEECTTC------THHHHHHHHTTCCEEEC
T ss_pred HHHHHHhcCCCEEEECcch------HHHHHHHHHcCCCceee
Confidence 4456677799999965432 36788999999997754
No 180
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=43.29 E-value=1.2e+02 Score=23.94 Aligned_cols=61 Identities=11% Similarity=0.149 Sum_probs=40.6
Q ss_pred CcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcc
Q psy9408 24 IKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGK 86 (219)
Q Consensus 24 g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~ 86 (219)
+.+|.+|.--++.+ ..++.|..+|..-. .++.....+...+-..+.+.+++.+||+|++-.
T Consensus 27 ~~~I~~Vvs~~~~~-~~~~~A~~~gIp~~-~~~~~~~~~r~~~~~~~~~~l~~~~~Dliv~a~ 87 (209)
T 1meo_A 27 SAQIDIVISNKAAV-AGLDKAERAGIPTR-VINHKLYKNRVEFDSAIDLVLEEFSIDIVCLAG 87 (209)
T ss_dssp SCEEEEEEESSTTC-HHHHHHHHTTCCEE-ECCGGGSSSHHHHHHHHHHHHHHTTCCEEEEES
T ss_pred CcEEEEEEeCCCCh-HHHHHHHHcCCCEE-EECccccCchhhhhHHHHHHHHhcCCCEEEEcc
Confidence 35888877776543 44677888998743 333221234455556677888899999998754
No 181
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=42.97 E-value=1.2e+02 Score=23.86 Aligned_cols=71 Identities=11% Similarity=0.115 Sum_probs=43.6
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHH-hCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAM-AMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~-a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|++|+++ |.+|+.+.-... ..+.+.+.. ..|..++..+..| -.|...+.+.+.++.++. .+|+++...
T Consensus 23 ~~ia~~l~~~---G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~D-~~~~~~v~~~~~~~~~~~g~id~li~~A 95 (266)
T 3oig_A 23 WGIARSLHEA---GARLIFTYAGER-LEKSVHELAGTLDRNDSIILPCD-VTNDAEIETCFASIKEQVGVIHGIAHCI 95 (266)
T ss_dssp HHHHHHHHHT---TCEEEEEESSGG-GHHHHHHHHHTSSSCCCEEEECC-CSSSHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHC---CCEEEEecCchH-HHHHHHHHHHhcCCCCceEEeCC-CCCHHHHHHHHHHHHHHhCCeeEEEEcc
Confidence 4567777765 467776654433 234444443 3454456666544 457777778888777765 479887654
No 182
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=42.76 E-value=93 Score=25.72 Aligned_cols=74 Identities=8% Similarity=0.010 Sum_probs=47.0
Q ss_pred HHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCC-EEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEccc
Q psy9408 10 AIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVD-RAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGKQ 87 (219)
Q Consensus 10 Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD-~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~~ 87 (219)
..+.|++|.++ |.+|+++.-.....++...++...|.+ ++..+..| -.|...+..++.++.++. ..|+++.-..
T Consensus 21 G~~la~~l~~~---G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D-l~~~~~v~~~~~~~~~~~g~id~lv~nAg 96 (319)
T 3ioy_A 21 GIGLVRQLLNQ---GCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLD-VASREGFKMAADEVEARFGPVSILCNNAG 96 (319)
T ss_dssp HHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECC-TTCHHHHHHHHHHHHHHTCCEEEEEECCC
T ss_pred HHHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECC-CCCHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence 34567777765 467777665554444555555555542 45555533 567888888888887775 5788886554
No 183
>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} SCOP: c.61.1.1 PDB: 1qb8_A* 1qcc_A* 1qcd_A 1mzv_A*
Probab=42.36 E-value=35 Score=27.55 Aligned_cols=43 Identities=16% Similarity=0.139 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHhc--CCCEEEEcccccCCCcCcHHHHHHHHcCCCcc
Q psy9408 63 SLSVAKLLQVIVKKE--NPQLVILGKQSIDSDNNQTGQMLAALLNWPQA 109 (219)
Q Consensus 63 ~~~~A~~la~~ik~~--~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~v 109 (219)
....++.|++.+++. ++|+|+.-. ..|-.++..+|..||.|++
T Consensus 54 ~~~~~~~la~~i~~~~~~~d~Ivgv~----~gG~~~a~~lA~~L~~p~~ 98 (236)
T 1qb7_A 54 LKAIRDFLVQRYRAMSPAPTHILGFD----ARGFLFGPMIAVELEIPFV 98 (236)
T ss_dssp HHHHHHHHHHHHHHCSSCCSEEEEET----TGGGGTHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHhhCCCCCEEEEEC----cCcHHHHHHHHHHhCCCEE
Confidence 345667777777776 788887543 2345799999999999975
No 184
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=42.26 E-value=1.1e+02 Score=23.11 Aligned_cols=64 Identities=11% Similarity=0.143 Sum_probs=38.7
Q ss_pred cEEEEEEecCcch-------------HHHH-HHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEE-ccccc
Q psy9408 25 KEIIAISCGNKKC-------------KEIL-QIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVIL-GKQSI 89 (219)
Q Consensus 25 ~~V~av~~G~~~~-------------~~~l-r~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~-G~~s~ 89 (219)
.+|..|++|+... -..+ +.+..+|++-....-- .-|.+....++..+....++|+|++ |..+.
T Consensus 16 ~~v~iitvsd~~~~~~~~~g~i~D~ng~~L~~~L~~~G~~v~~~~iV--~Dd~~~i~~al~~~~a~~~~DlVittGG~g~ 93 (178)
T 3iwt_A 16 LNFYVITISTSRYEKLLKKEPIVDESGDIIKQLLIENGHKIIGYSLV--PDDKIKILKAFTDALSIDEVDVIISTGGTGY 93 (178)
T ss_dssp CEEEEEEECHHHHHHHHTTCCCCCHHHHHHHHHHHHTTCEEEEEEEE--CSCHHHHHHHHHHHHTCTTCCEEEEESCCSS
T ss_pred CEEEEEEEcCCCccccccCCCCCcchHHHHHHHHHHCCCEEEEEEEe--CCCHHHHHHHHHHHHhcCCCCEEEecCCccc
Confidence 4788999986311 1233 4455689875443221 1255677777777776678998876 44444
Q ss_pred C
Q psy9408 90 D 90 (219)
Q Consensus 90 d 90 (219)
+
T Consensus 94 ~ 94 (178)
T 3iwt_A 94 S 94 (178)
T ss_dssp S
T ss_pred C
Confidence 3
No 185
>3qek_A NMDA glutamate receptor subunit; amino terminal domain, ION channel, NMDA receptor, allosteri modulation, phenylethanolamine, polyamine; HET: NAG BMA; 2.00A {Xenopus laevis} PDB: 3qel_A* 3qem_A* 3q41_A*
Probab=42.26 E-value=31 Score=28.99 Aligned_cols=60 Identities=7% Similarity=0.042 Sum_probs=36.7
Q ss_pred EEEEecCCCCCHHHHHHHHHH-HHHhcCCCEEEEccccc--CCCcCcHHHHHHHHcCCCcccce
Q psy9408 52 AILIETDTILQSLSVAKLLQV-IVKKENPQLVILGKQSI--DSDNNQTGQMLAALLNWPQATFA 112 (219)
Q Consensus 52 v~~v~~~~~~d~~~~A~~la~-~ik~~~~dlVl~G~~s~--d~~~~~v~~~lA~~Lg~p~vt~v 112 (219)
+.++..|...|+...+..+++ ++++ +.+.|+-+.++. ..........++...++|+++..
T Consensus 39 l~~~~~d~~~d~~~a~~~~~~~Li~~-~V~aiiG~~~~~~~~s~~~~a~~~~~~~~~iP~is~~ 101 (384)
T 3qek_A 39 LQATSVTHRPNAIQMALSVCEDLISS-QVYAILVSHPPAPTDHLTPTPISYTAGFYRIPVIGLT 101 (384)
T ss_dssp EEEEEEECCSSHHHHHHHHHHHTGGG-TEEEEEECC--------CCHHHHHHHHTTTCCEEESS
T ss_pred EEEEEecccCCHHHHHHHHHHHHHHc-CceEEEEecCCCCccchhHHHHHHHHhcCCCCEEecc
Confidence 333333446788888888777 6765 777777643221 11223445678899999999754
No 186
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=42.12 E-value=41 Score=22.96 Aligned_cols=63 Identities=11% Similarity=0.171 Sum_probs=35.1
Q ss_pred hHHHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCC-CHHHHHHHHHHHHHh
Q psy9408 7 DEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTIL-QSLSVAKLLQVIVKK 76 (219)
Q Consensus 7 D~~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~-d~~~~A~~la~~ik~ 76 (219)
+...++...++++.. +...+++++-.. ..+...+++..|++..+. . .+ +.+.....+..+++.
T Consensus 63 ~~~g~~~~~~l~~~~-~~~~ii~~t~~~--~~~~~~~~~~~g~~~~l~-K---P~~~~~~l~~~i~~~l~~ 126 (130)
T 3eod_A 63 RMNGLKLLEHIRNRG-DQTPVLVISATE--NMADIAKALRLGVEDVLL-K---PVKDLNRLREMVFACLYP 126 (130)
T ss_dssp ---CHHHHHHHHHTT-CCCCEEEEECCC--CHHHHHHHHHHCCSEEEE-S---CC---CHHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHhcC-CCCCEEEEEcCC--CHHHHHHHHHcCCCEEEe-C---CCCcHHHHHHHHHHHhch
Confidence 455677777777653 334565555333 345667788889987443 2 23 556666777666654
No 187
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=41.93 E-value=1.2e+02 Score=25.41 Aligned_cols=16 Identities=31% Similarity=0.588 Sum_probs=8.6
Q ss_pred HHHHHhCCCCEEEEEe
Q psy9408 41 LQIAMAMGVDRAILIE 56 (219)
Q Consensus 41 lr~~~a~GaD~v~~v~ 56 (219)
++-+.++|+.+++.++
T Consensus 188 iqlak~~Ga~~Vi~~~ 203 (356)
T 1pl8_A 188 LLVAKAMGAAQVVVTD 203 (356)
T ss_dssp HHHHHHTTCSEEEEEE
T ss_pred HHHHHHcCCCEEEEEC
Confidence 3444456665555554
No 188
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=41.92 E-value=92 Score=26.99 Aligned_cols=71 Identities=15% Similarity=0.064 Sum_probs=44.5
Q ss_pred hHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCC--CEEEEcccccCCCcCcHHHHHHH-HcCCCc
Q psy9408 37 CKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENP--QLVILGKQSIDSDNNQTGQMLAA-LLNWPQ 108 (219)
Q Consensus 37 ~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~--dlVl~G~~s~d~~~~~v~~~lA~-~Lg~p~ 108 (219)
..+.++.+..+|+|.+.+.+.-....|..+...+..+.+..+. ++.|--+.-.| .+-.++-.+|+ ..|+-+
T Consensus 159 ~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~~~l~~H~Hnd-~GlAvAN~laAv~aGa~~ 232 (370)
T 3rmj_A 159 LAEICGAVIEAGATTINIPDTVGYSIPYKTEEFFRELIAKTPNGGKVVWSAHCHND-LGLAVANSLAALKGGARQ 232 (370)
T ss_dssp HHHHHHHHHHHTCCEEEEECSSSCCCHHHHHHHHHHHHHHSTTGGGSEEEEECBCT-TSCHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHcCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCcCceEEEEEeCCC-CChHHHHHHHHHHhCCCE
Confidence 3456788889999987776544467999999999888776642 13333333323 34456655555 444443
No 189
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=41.89 E-value=23 Score=32.33 Aligned_cols=52 Identities=10% Similarity=0.190 Sum_probs=34.4
Q ss_pred CHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcccceeE
Q psy9408 62 QSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASK 114 (219)
Q Consensus 62 d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~~ 114 (219)
+...+.+ +++.+++-+-=+|++|......+..+---.+|+++|+|+++...+
T Consensus 193 ~~~~i~~-~~~~l~~a~rpvil~G~g~~~~~a~~~l~~lae~~~~Pv~~t~~~ 244 (566)
T 1ozh_A 193 PDDAIDQ-VAKLIAQAKNPIFLLGLMASQPENSKALRRLLETSHIPVTSTYQA 244 (566)
T ss_dssp CHHHHHH-HHHHHHHCSSEEEEECGGGGSGGGHHHHHHHHHHHCCCEEECGGG
T ss_pred CHHHHHH-HHHHHHcCCCeEEEECCCcccccHHHHHHHHHHHHCCCEEEcccc
Confidence 4444433 444555444348899988654444567789999999999876554
No 190
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=41.88 E-value=81 Score=25.41 Aligned_cols=60 Identities=15% Similarity=0.136 Sum_probs=37.4
Q ss_pred cEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcc
Q psy9408 25 KEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGK 86 (219)
Q Consensus 25 ~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~ 86 (219)
.+|.+|.-.++++ ..++.|..+|..- +.++.....+-..+-..+.+.+++.+||+|++-.
T Consensus 50 ~~I~~Vvt~~~~~-~~~~~A~~~gIp~-~~~~~~~~~~r~~~~~~~~~~l~~~~~Dliv~ag 109 (229)
T 3auf_A 50 GRVAVVISDRADA-YGLERARRAGVDA-LHMDPAAYPSRTAFDAALAERLQAYGVDLVCLAG 109 (229)
T ss_dssp EEEEEEEESSTTC-HHHHHHHHTTCEE-EECCGGGSSSHHHHHHHHHHHHHHTTCSEEEESS
T ss_pred CeEEEEEcCCCch-HHHHHHHHcCCCE-EEECcccccchhhccHHHHHHHHhcCCCEEEEcC
Confidence 4676666554432 3466677788763 3333211234455666777888889999998755
No 191
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=41.48 E-value=1.3e+02 Score=23.97 Aligned_cols=71 Identities=17% Similarity=0.196 Sum_probs=43.8
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|.+|+++ |.+|+++.-.+...++..+++...|.+ +..+..| -.|...+..++.++.++. ++|+++.-.
T Consensus 36 ~~ia~~l~~~---G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D-v~~~~~v~~~~~~~~~~~g~iD~lv~~A 107 (277)
T 2rhc_B 36 LEIARRLGKE---GLRVFVCARGEEGLRTTLKELREAGVE-ADGRTCD-VRSVPEIEALVAAVVERYGPVDVLVNNA 107 (277)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCC-EEEEECC-TTCHHHHHHHHHHHHHHTCSCSEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhcCCc-eEEEECC-CCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence 3456777765 467777665543334444455455644 4444433 467788888888887776 489888654
No 192
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=41.48 E-value=1.2e+02 Score=23.28 Aligned_cols=78 Identities=12% Similarity=0.166 Sum_probs=45.3
Q ss_pred cEEEEEEecCcch-------------HHHH-HHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEE-Eccccc
Q psy9408 25 KEIIAISCGNKKC-------------KEIL-QIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVI-LGKQSI 89 (219)
Q Consensus 25 ~~V~av~~G~~~~-------------~~~l-r~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl-~G~~s~ 89 (219)
-+|..++.|++-. -..+ ..+..+|++-....-- .-|.+.+.++|.+++++.++|+|+ +|.++.
T Consensus 16 ~rv~IittGde~~~~~~~~G~i~Dsn~~~L~~~l~~~G~~v~~~~iv--~Dd~~~I~~al~~a~~~~~~DlVittGG~s~ 93 (178)
T 2pjk_A 16 LNFYVITISTSRYEKLLKKEPIVDESGDIIKQLLIENGHKIIGYSLV--PDDKIKILKAFTDALSIDEVDVIISTGGTGY 93 (178)
T ss_dssp CEEEEEEECHHHHHHHHTTCCCCCHHHHHHHHHHHHTTCEEEEEEEE--CSCHHHHHHHHHHHHTCTTCCEEEEESCCSS
T ss_pred CEEEEEEeCcccccccccCCeEeehHHHHHHHHHHHCCCEEEEEEEe--CCCHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 4789999995211 1233 3455688864433111 225778888888888755689776 455555
Q ss_pred CCCcCcHHHHHHHHcC
Q psy9408 90 DSDNNQTGQMLAALLN 105 (219)
Q Consensus 90 d~~~~~v~~~lA~~Lg 105 (219)
+ ..-.++..++..++
T Consensus 94 g-~~D~t~eal~~~~~ 108 (178)
T 2pjk_A 94 S-PTDITVETIRKLFD 108 (178)
T ss_dssp S-TTCCHHHHHGGGCS
T ss_pred C-CCcchHHHHHHHhc
Confidence 4 32344555555443
No 193
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=41.35 E-value=39 Score=25.15 Aligned_cols=43 Identities=12% Similarity=0.254 Sum_probs=31.3
Q ss_pred HHHHHHHHHhcCCCEEEEcccc-cCC-Cc------CcHHHHHHHHcCCCcc
Q psy9408 67 AKLLQVIVKKENPQLVILGKQS-IDS-DN------NQTGQMLAALLNWPQA 109 (219)
Q Consensus 67 A~~la~~ik~~~~dlVl~G~~s-~d~-~~------~~v~~~lA~~Lg~p~v 109 (219)
...|.+++++.+++.|++|--. .|| .+ +..+-+|..++++|+.
T Consensus 42 ~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~~lpV~ 92 (138)
T 1nu0_A 42 WNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVK 92 (138)
T ss_dssp HHHHHHHHHHHCCSEEEEEEEECTTSCBCHHHHHHHHHHHHHHHHHCCCEE
T ss_pred HHHHHHHHHHcCCCEEEEecccCCCcCcCHHHHHHHHHHHHHHHHhCCCEE
Confidence 4788899999999999999221 122 23 4788888888887744
No 194
>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens}
Probab=41.04 E-value=38 Score=26.63 Aligned_cols=41 Identities=12% Similarity=0.007 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHh--cCCCEEEEcccccCCCcCcHHHHHHHHcCCCcc
Q psy9408 65 SVAKLLQVIVKK--ENPQLVILGKQSIDSDNNQTGQMLAALLNWPQA 109 (219)
Q Consensus 65 ~~A~~la~~ik~--~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~v 109 (219)
..++.+++.+++ .++|+|+.-... +-.++..+|..||+|++
T Consensus 47 ~l~~~la~~i~~~~~~~d~Iv~v~~~----g~~~a~~la~~l~~p~~ 89 (205)
T 2wns_A 47 QVADILFQTAQNAGISFDTVCGVPYT----ALPLATVICSTNQIPML 89 (205)
T ss_dssp HHHHHHHHHHHHTTCCCSEEEECTTT----THHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcCCc----hHHHHHHHHHHHCcCEE
Confidence 356777777766 468887755443 45789999999999985
No 195
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=40.88 E-value=78 Score=21.65 Aligned_cols=65 Identities=12% Similarity=0.169 Sum_probs=41.5
Q ss_pred hHHHHHHHHHhhhh-cCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc
Q psy9408 7 DEIAIESAIRLRES-SNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE 77 (219)
Q Consensus 7 D~~Ale~A~~l~e~-~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~ 77 (219)
+...++...+|++. ......|++++-.. ..+....++..|++..+. . .++.......|..+++..
T Consensus 66 ~~~g~~~~~~l~~~~~~~~~~ii~~s~~~--~~~~~~~~~~~g~~~~l~-k---P~~~~~l~~~i~~~~~~~ 131 (143)
T 3cnb_A 66 GMDGFSICHRIKSTPATANIIVIAMTGAL--TDDNVSRIVALGAETCFG-K---PLNFTLLEKTIKQLVEQK 131 (143)
T ss_dssp TSCHHHHHHHHHTSTTTTTSEEEEEESSC--CHHHHHHHHHTTCSEEEE-S---SCCHHHHHHHHHHHHHTT
T ss_pred CCcHHHHHHHHHhCccccCCcEEEEeCCC--CHHHHHHHHhcCCcEEEe-C---CCCHHHHHHHHHHHHHhh
Confidence 34456777777762 11234566555333 356677889999987543 2 467888888888887654
No 196
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=40.72 E-value=67 Score=22.16 Aligned_cols=64 Identities=13% Similarity=0.152 Sum_probs=42.1
Q ss_pred hHHHHHHHHHhhh--hcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc
Q psy9408 7 DEIAIESAIRLRE--SSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE 77 (219)
Q Consensus 7 D~~Ale~A~~l~e--~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~ 77 (219)
+...++...+|++ .. ....|+.++--. ..+...+++..|++..+. . .++.......|..+++..
T Consensus 63 ~~~g~~~~~~l~~~~~~-~~~~ii~ls~~~--~~~~~~~~~~~g~~~~l~-K---P~~~~~l~~~i~~~~~~~ 128 (140)
T 3lua_A 63 EKEGLEVLSAIRNNSRT-ANTPVIIATKSD--NPGYRHAALKFKVSDYIL-K---PYPTKRLENSVRSVLKIC 128 (140)
T ss_dssp HHHHHHHHHHHHHSGGG-TTCCEEEEESCC--CHHHHHHHHHSCCSEEEE-S---SCCTTHHHHHHHHHHCC-
T ss_pred CCcHHHHHHHHHhCccc-CCCCEEEEeCCC--CHHHHHHHHHcCCCEEEE-C---CCCHHHHHHHHHHHHHhc
Confidence 5677888888887 43 245666665333 356778899999997543 3 356667777777776543
No 197
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=40.71 E-value=77 Score=21.95 Aligned_cols=64 Identities=11% Similarity=0.057 Sum_probs=42.4
Q ss_pred hHHHHHHHHHhhh--hcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCC-CHHHHHHHHHHHHHhc
Q psy9408 7 DEIAIESAIRLRE--SSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTIL-QSLSVAKLLQVIVKKE 77 (219)
Q Consensus 7 D~~Ale~A~~l~e--~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~-d~~~~A~~la~~ik~~ 77 (219)
+...++...+|++ .. ....+++++-.. ..+....++..|++..+. . .+ +.......|..+++..
T Consensus 63 ~~~g~~~~~~lr~~~~~-~~~pii~~s~~~--~~~~~~~~~~~ga~~~l~-K---p~~~~~~l~~~i~~~l~~~ 129 (144)
T 3kht_A 63 IANGFEVMSAVRKPGAN-QHTPIVILTDNV--SDDRAKQCMAAGASSVVD-K---SSNNVTDFYGRIYAIFSYW 129 (144)
T ss_dssp GGCHHHHHHHHHSSSTT-TTCCEEEEETTC--CHHHHHHHHHTTCSEEEE-C---CTTSHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhcccc-cCCCEEEEeCCC--CHHHHHHHHHcCCCEEEE-C---CCCcHHHHHHHHHHHHHHH
Confidence 4556777778876 32 234566555332 356778899999997544 2 45 7888888888887654
No 198
>3aek_A Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_A* 3aes_A* 3aer_A* 3aet_A 3aeu_A
Probab=40.70 E-value=1.5e+02 Score=25.91 Aligned_cols=31 Identities=13% Similarity=-0.052 Sum_probs=21.6
Q ss_pred HHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcc
Q psy9408 70 LQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQA 109 (219)
Q Consensus 70 la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~v 109 (219)
+.+.+++.+||+++.|.. ......++|+|..
T Consensus 369 ~~~~i~~~~pDliig~~~---------~~~p~~~~G~P~~ 399 (437)
T 3aek_A 369 QLDRHEAINPDLTVCGLG---------LANPLEAKGHATK 399 (437)
T ss_dssp HHHHHHHHCCSEEEECHH---------HHHHHHTTTCCEE
T ss_pred HHHHHhccCCCEEEeCCc---------cccHHHHCCCCEE
Confidence 347788889999997742 2224566899964
No 199
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=40.55 E-value=45 Score=24.40 Aligned_cols=42 Identities=12% Similarity=-0.008 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcc
Q psy9408 64 LSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQA 109 (219)
Q Consensus 64 ~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~v 109 (219)
...+..||+.+++.++|+|+.=. ..+-.++..+|..||.|++
T Consensus 12 ~~~~~~la~~i~~~~~d~iv~v~----~gg~~~a~~la~~l~~~~~ 53 (153)
T 1vdm_A 12 DRAIFALAEKLREYKPDVIIGVA----RGGLIPAVRLSHILGDIPL 53 (153)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEET----TTTHHHHHHHHHHTTSCCE
T ss_pred HHHHHHHHHHHHccCCCEEEEEC----CcCHHHHHHHHHHhCCCce
Confidence 34566677777666888777442 2456789999999999965
No 200
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=40.50 E-value=44 Score=29.14 Aligned_cols=104 Identities=13% Similarity=0.057 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHhcCCCEEEE-cccccCCCcCcHHHHHHHHcCCCcccceeEEEEe-eCCeEEEEEEcCCeEEEEEE--c
Q psy9408 64 LSVAKLLQVIVKKENPQLVIL-GKQSIDSDNNQTGQMLAALLNWPQATFASKIVLK-KNNKILVTQEIEDGKETILL--S 139 (219)
Q Consensus 64 ~~~A~~la~~ik~~~~dlVl~-G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~~l~~~-~~~~~~~~R~~~gG~~~~~~--~ 139 (219)
......+.+.+++.++|+|+. |..| ..+++-.+|.+++.|++.=-|.-..+ +-+...+.-...+....... .
T Consensus 92 ~~~v~~~~~~~~~~~~d~IIavGGGs----~~D~AK~iA~~~~~p~i~IPTTagtgSevt~~avi~~~~~~~k~~~~~~~ 167 (387)
T 3uhj_A 92 TSEIERVRKVAIEHGSDILVGVGGGK----TADTAKIVAIDTGARIVIAPTIASTDAPCSAIAVRYTEHGVYEEALRLPR 167 (387)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEESSHH----HHHHHHHHHHHTTCEEEECCSSCCCSTTTSSEEEEECTTSCEEEEEECSC
T ss_pred HHHHHHHHHHHhhcCCCEEEEeCCcH----HHHHHHHHHHhcCCCEEEecCcccCCcccCCeEEEEcCCCceEeeeecCC
Confidence 345556666777788998764 4433 24489999999999987654442211 01222222222222222122 3
Q ss_pred CCEEEEEecCCC--CCCCCCHHHHHHHccCcceE
Q psy9408 140 LPAIITTDLRMN--EPRYVTLMNIIKARKKNINI 171 (219)
Q Consensus 140 ~P~vvtv~~~~~--~pr~p~l~~~~~A~~~~i~~ 171 (219)
.|.++-+.+... -|+.-+....+.+-++-+|.
T Consensus 168 ~P~~vi~Dp~l~~tlP~~~~aag~~Dal~ha~Ea 201 (387)
T 3uhj_A 168 NPDAVVVDSALVAAAPARFLVAGIGDALSTWFEA 201 (387)
T ss_dssp CCSEEEECHHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEChHHHhhCCHHHHHHHHHHHHHHHHHH
Confidence 687777776543 35545556677776655543
No 201
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=40.43 E-value=45 Score=28.76 Aligned_cols=17 Identities=29% Similarity=0.403 Sum_probs=10.2
Q ss_pred HHHHHHhCCCCEEEEEe
Q psy9408 40 ILQIAMAMGVDRAILIE 56 (219)
Q Consensus 40 ~lr~~~a~GaD~v~~v~ 56 (219)
+++-|..+|+.+++.++
T Consensus 229 aiqlak~~Ga~~Vi~~~ 245 (404)
T 3ip1_A 229 AVAILKHAGASKVILSE 245 (404)
T ss_dssp HHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHcCCCEEEEEC
Confidence 34455566776666654
No 202
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=40.25 E-value=99 Score=25.78 Aligned_cols=61 Identities=18% Similarity=0.134 Sum_probs=41.2
Q ss_pred hCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-----CCCEEEEcccccCCCcCcHHHHHHHHcCCC
Q psy9408 46 AMGVDRAILIETDTILQSLSVAKLLQVIVKKE-----NPQLVILGKQSIDSDNNQTGQMLAALLNWP 107 (219)
Q Consensus 46 a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-----~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p 107 (219)
..|..+-.....+ ....+-...+..+++++- +.|.|++|.++.|......+.+++.+||+|
T Consensus 50 rtgi~~r~~~~~~-~~~~~la~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lgl~ 115 (333)
T 4dfe_A 50 RTGIHARYFAEPD-VTTSDLAFIASQRAIEAADIDPQSIDLIIVATSTPDFVFPSTACLLQNKLGIR 115 (333)
T ss_dssp HHCCSEEEECCTT-CCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHTTCC
T ss_pred hcCceEEEEcCCC-CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHhCCC
Confidence 3478877665432 223334444555555542 578999998887766677899999999995
No 203
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=39.96 E-value=32 Score=24.83 Aligned_cols=36 Identities=19% Similarity=0.208 Sum_probs=28.0
Q ss_pred HHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcc
Q psy9408 73 IVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQA 109 (219)
Q Consensus 73 ~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~v 109 (219)
.+++..||+||+=-.-.+.+|-++.-++-. .++|++
T Consensus 48 ~~~~~~~DlvllDi~mP~~~G~el~~~lr~-~~ipvI 83 (123)
T 2lpm_A 48 IARKGQFDIAIIDVNLDGEPSYPVADILAE-RNVPFI 83 (123)
T ss_dssp HHHHCCSSEEEECSSSSSCCSHHHHHHHHH-TCCSSC
T ss_pred HHHhCCCCEEEEecCCCCCCHHHHHHHHHc-CCCCEE
Confidence 445678999999888888888888887765 477754
No 204
>3uf6_A LMO1369 protein; structural genomics, the center for structural genomics of I diseases, csgid, unknown function, transferase; HET: COD; 1.80A {Listeria monocytogenes} PDB: 3tng_A* 3u9e_A*
Probab=39.95 E-value=89 Score=26.18 Aligned_cols=72 Identities=15% Similarity=0.095 Sum_probs=47.7
Q ss_pred CHhhHHHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEE
Q psy9408 4 NPFDEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVI 83 (219)
Q Consensus 4 Np~D~~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl 83 (219)
.+.|+..|+.|.++.++ | -+..+.+|+++. ++ ..+ .+.+-.++ . .+....++.-+.++++.+.|.++
T Consensus 25 e~~d~~vl~Aa~~a~~e-g---~~~~ILvG~~~~---I~-~~~--~~~~eIid-~--~~~~~aar~a~~mV~~G~ADa~v 91 (291)
T 3uf6_A 25 GADDEVVLETIRLALKQ-K---LGKFLLFGKKED---KT-LTA--NESVTWIQ-T--DTAEAAAQGAILAVKNKEADILV 91 (291)
T ss_dssp TCCSHHHHHHHHHHHHT-T---CCEEEEEESSCC---HH-HHT--STTEEEEE-C--CSHHHHHHHHHHHHHTTSCSEEE
T ss_pred CCCCHHHHHHHHHHHHc-C---CceEEEEcCHHH---Hh-hhc--cCCCEEEC-C--CChHHHHHHHHHHHHCCCCCEEE
Confidence 35689999999999886 3 356778997642 22 222 34444444 2 23344555566788888999999
Q ss_pred Ecccc
Q psy9408 84 LGKQS 88 (219)
Q Consensus 84 ~G~~s 88 (219)
+|..+
T Consensus 92 sG~~~ 96 (291)
T 3uf6_A 92 KGFIP 96 (291)
T ss_dssp ECSSC
T ss_pred ECCCC
Confidence 99853
No 205
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=39.87 E-value=1.5e+02 Score=24.04 Aligned_cols=71 Identities=10% Similarity=0.062 Sum_probs=40.7
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcC-CCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKEN-PQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~-~dlVl~G~ 86 (219)
.+.|.+|+++ |.+|+++.-.+...++..+++...|.+ +..+..| -.|.+.+..++.++.++.+ +|+++.-.
T Consensus 48 ~aia~~L~~~---G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D-v~d~~~v~~~~~~~~~~~g~iD~lvnnA 119 (291)
T 3cxt_A 48 FAIASAYAKA---GATIVFNDINQELVDRGMAAYKAAGIN-AHGYVCD-VTDEDGIQAMVAQIESEVGIIDILVNNA 119 (291)
T ss_dssp HHHHHHHHHT---TCEEEEEESSHHHHHHHHHHHHHTTCC-CEEEECC-TTCHHHHHHHHHHHHHHTCCCCEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhcCCe-EEEEEec-CCCHHHHHHHHHHHHHHcCCCcEEEECC
Confidence 3456666664 367776654433333334444444543 3333322 4577778888887777764 79888644
No 206
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=39.86 E-value=48 Score=22.83 Aligned_cols=64 Identities=14% Similarity=0.092 Sum_probs=41.2
Q ss_pred hHHHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc
Q psy9408 7 DEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE 77 (219)
Q Consensus 7 D~~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~ 77 (219)
|...++...+|++.. ....+++++ +....+....++..|++..+. ..+++......|.++.+..
T Consensus 63 ~~~g~~~~~~l~~~~-~~~~ii~~s--~~~~~~~~~~~~~~g~~~~l~----kP~~~~~l~~~i~~~~~~~ 126 (137)
T 3hdg_A 63 KLGGLEMLDRIKAGG-AKPYVIVIS--AFSEMKYFIKAIELGVHLFLP----KPIEPGRLMETLEDFRHIK 126 (137)
T ss_dssp SSCHHHHHHHHHHTT-CCCEEEECC--CCCCHHHHHHHHHHCCSEECC----SSCCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhcC-CCCcEEEEe--cCcChHHHHHHHhCCcceeEc----CCCCHHHHHHHHHHHHHHH
Confidence 345667777787763 233444433 333356778889999997433 2478888888888877653
No 207
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=39.74 E-value=94 Score=26.39 Aligned_cols=6 Identities=0% Similarity=0.529 Sum_probs=3.8
Q ss_pred CCCEEE
Q psy9408 78 NPQLVI 83 (219)
Q Consensus 78 ~~dlVl 83 (219)
++|+||
T Consensus 267 g~Dvvi 272 (380)
T 1vj0_A 267 GADFIL 272 (380)
T ss_dssp CEEEEE
T ss_pred CCcEEE
Confidence 566666
No 208
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=39.71 E-value=1.7e+02 Score=24.51 Aligned_cols=67 Identities=12% Similarity=0.155 Sum_probs=43.5
Q ss_pred hHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcC-CCEEEEcccccCCCcCcHHHHHHH-HcCC
Q psy9408 37 CKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKEN-PQLVILGKQSIDSDNNQTGQMLAA-LLNW 106 (219)
Q Consensus 37 ~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~-~dlVl~G~~s~d~~~~~v~~~lA~-~Lg~ 106 (219)
..+.++.+..+|+|.+.+.+.-....|..+.+.+..+.+..+ ..+=+=++...+ -.++-.+|+ ..|+
T Consensus 159 ~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~l~~H~Hnd~G---la~AN~laAv~aGa 227 (307)
T 1ydo_A 159 VIRLSEALFEFGISELSLGDTIGAANPAQVETVLEALLARFPANQIALHFHDTRG---TALANMVTALQMGI 227 (307)
T ss_dssp HHHHHHHHHHHTCSCEEEECSSCCCCHHHHHHHHHHHHTTSCGGGEEEECBGGGS---CHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCCc---hHHHHHHHHHHhCC
Confidence 455677888999999888765446799999999888876652 345555554433 335544444 3343
No 209
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=39.70 E-value=89 Score=26.17 Aligned_cols=62 Identities=8% Similarity=0.085 Sum_probs=42.9
Q ss_pred CCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-----CCCEEEEcccccCCCcCcHHHHHHHHcCCCcc
Q psy9408 47 MGVDRAILIETDTILQSLSVAKLLQVIVKKE-----NPQLVILGKQSIDSDNNQTGQMLAALLNWPQA 109 (219)
Q Consensus 47 ~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-----~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~v 109 (219)
-|..+-++..++ +...+--+++..+++++- +.|+|+++.++.|...-..+.+|+.+||.+-.
T Consensus 48 tGI~~R~~a~~~-e~~~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LGl~~~ 114 (350)
T 4ewp_A 48 TGIVTRQRATAE-ETVPVMAVGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIGATPA 114 (350)
T ss_dssp HCCSEEECCCSS-CCHHHHHHHHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTTCTTS
T ss_pred cCceEEEEcCCC-CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhCCCCc
Confidence 487776665533 333333345555566553 56899999988887778899999999998743
No 210
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=39.63 E-value=84 Score=21.66 Aligned_cols=64 Identities=6% Similarity=0.077 Sum_probs=41.6
Q ss_pred hHHHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc
Q psy9408 7 DEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE 77 (219)
Q Consensus 7 D~~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~ 77 (219)
|...++...+|++.. +...|++++-.. ..+....++..|++..+. . .++.......|..+++..
T Consensus 61 ~~~g~~~~~~l~~~~-~~~~ii~ls~~~--~~~~~~~~~~~g~~~~l~-k---p~~~~~l~~~l~~~~~~~ 124 (143)
T 3jte_A 61 KLSGMDILREIKKIT-PHMAVIILTGHG--DLDNAILAMKEGAFEYLR-K---PVTAQDLSIAINNAINRK 124 (143)
T ss_dssp SSCHHHHHHHHHHHC-TTCEEEEEECTT--CHHHHHHHHHTTCSEEEE-S---SCCHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHhC-CCCeEEEEECCC--CHHHHHHHHHhCcceeEe-C---CCCHHHHHHHHHHHHHHH
Confidence 344566777777764 345666555433 356678899999987543 3 467787888887777643
No 211
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=39.59 E-value=1.4e+02 Score=23.71 Aligned_cols=72 Identities=17% Similarity=0.117 Sum_probs=41.1
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc--CCCEEEEccc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE--NPQLVILGKQ 87 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~--~~dlVl~G~~ 87 (219)
.+.|.+|+++ |.+|+++.-.+...++..+++...|.+ +..+..| -.|++.+.+++.++.++. +.|+++.-..
T Consensus 35 ~aia~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D-~~~~~~~~~~~~~~~~~~~g~id~lv~nAg 108 (273)
T 1ae1_A 35 YAIVEELAGL---GARVYTCSRNEKELDECLEIWREKGLN-VEGSVCD-LLSRTERDKLMQTVAHVFDGKLNILVNNAG 108 (273)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCC-EEEEECC-TTCHHHHHHHHHHHHHHTTSCCCEEEECCC
T ss_pred HHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhcCCc-eEEEECC-CCCHHHHHHHHHHHHHHcCCCCcEEEECCC
Confidence 3456666664 357766554433333334444444543 3334323 457777888888777775 5788876543
No 212
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=39.42 E-value=1.4e+02 Score=23.46 Aligned_cols=71 Identities=13% Similarity=0.100 Sum_probs=44.9
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|.+|+++ |.+|+++.-.+...++..+++...|. ++..+..| -.|...+.+++.++.++. ++|+++.-.
T Consensus 16 ~~ia~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D-~~~~~~v~~~~~~~~~~~g~id~lv~nA 87 (256)
T 1geg_A 16 KAIALRLVKD---GFAVAIADYNDATAKAVASEINQAGG-HAVAVKVD-VSDRDQVFAAVEQARKTLGGFDVIVNNA 87 (256)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECC-TTSHHHHHHHHHHHHHHTTCCCEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEec-CCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence 4567777775 46887766544333444445545564 34455433 567888888888888776 589888644
No 213
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=39.38 E-value=84 Score=25.34 Aligned_cols=83 Identities=16% Similarity=0.182 Sum_probs=52.5
Q ss_pred cEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCC----C------CCH----HHHHHHHHHHHHhc-------------
Q psy9408 25 KEIIAISCGNKKCKEILQIAMAMGVDRAILIETDT----I------LQS----LSVAKLLQVIVKKE------------- 77 (219)
Q Consensus 25 ~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~----~------~d~----~~~A~~la~~ik~~------------- 77 (219)
.+|..+-+|+-. ...++.+...|+.++.++++|. + +.. ..-+.++++.+++.
T Consensus 29 ~~VlvvG~GglG-~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 107 (251)
T 1zud_1 29 SQVLIIGLGGLG-TPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRL 107 (251)
T ss_dssp CEEEEECCSTTH-HHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred CcEEEEccCHHH-HHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEeccC
Confidence 578888888754 4778889999999999998653 1 110 12344444444332
Q ss_pred ----------CCCEEEEcccccCCCcCcHHHHHHHHcCCCccc
Q psy9408 78 ----------NPQLVILGKQSIDSDNNQTGQMLAALLNWPQAT 110 (219)
Q Consensus 78 ----------~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt 110 (219)
++|+|+....+. .++..-...+...+.|++.
T Consensus 108 ~~~~~~~~~~~~DvVi~~~d~~--~~r~~l~~~~~~~~~p~i~ 148 (251)
T 1zud_1 108 TGEALKDAVARADVVLDCTDNM--ATRQEINAACVALNTPLIT 148 (251)
T ss_dssp CHHHHHHHHHHCSEEEECCSSH--HHHHHHHHHHHHTTCCEEE
T ss_pred CHHHHHHHHhcCCEEEECCCCH--HHHHHHHHHHHHhCCCEEE
Confidence 368888554322 3455566667778999875
No 214
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=39.36 E-value=1.3e+02 Score=23.27 Aligned_cols=72 Identities=11% Similarity=0.105 Sum_probs=45.9
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEccc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGKQ 87 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~~ 87 (219)
.+.|++|+++ |.+|+.+.-.+...++..+++...|.+ +..+..| -.|...+.+.+.++.++. ++|+++.-..
T Consensus 19 ~~~a~~l~~~---G~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D-~~~~~~~~~~~~~~~~~~~~id~li~~Ag 91 (247)
T 3lyl_A 19 FEVAHALASK---GATVVGTATSQASAEKFENSMKEKGFK-ARGLVLN-ISDIESIQNFFAEIKAENLAIDILVNNAG 91 (247)
T ss_dssp HHHHHHHHHT---TCEEEEEESSHHHHHHHHHHHHHTTCC-EEEEECC-TTCHHHHHHHHHHHHHTTCCCSEEEECCC
T ss_pred HHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhcCCc-eEEEEec-CCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 4567778775 468877665554445555556566654 4444433 567888888888877765 4898886543
No 215
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=39.24 E-value=94 Score=24.78 Aligned_cols=71 Identities=7% Similarity=0.027 Sum_probs=39.7
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHh-CCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMA-MGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a-~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|++|+++ |.+|+.+.-.....++..+++.. .|. ++..+..| -.|...+.+++.++.++. +.|+++.-.
T Consensus 34 ~aia~~l~~~---G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~D-v~~~~~v~~~~~~~~~~~g~id~lv~nA 106 (266)
T 4egf_A 34 ADIARAFAAA---GARLVLSGRDVSELDAARRALGEQFGT-DVHTVAID-LAEPDAPAELARRAAEAFGGLDVLVNNA 106 (266)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECC-TTSTTHHHHHHHHHHHHHTSCSEEEEEC
T ss_pred HHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHHhcCC-cEEEEEec-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 3556777765 36776655443333344444433 344 34444433 456666677777777665 578887644
No 216
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=38.97 E-value=1.4e+02 Score=23.43 Aligned_cols=71 Identities=10% Similarity=0.122 Sum_probs=42.1
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|++|+++ |.+|+++.-.+...++..+++...|.+ +..+..| -.|.+.+..++.++.++. ++|+++.-.
T Consensus 28 ~~ia~~l~~~---G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D-~~~~~~~~~~~~~~~~~~g~iD~lv~~A 99 (260)
T 2zat_A 28 LAIARRLAQD---GAHVVVSSRKQENVDRTVATLQGEGLS-VTGTVCH-VGKAEDRERLVAMAVNLHGGVDILVSNA 99 (260)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCC-EEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhcCCc-eEEEEcc-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 3456677765 467776654443333444444455644 4334323 457777777787777765 589888644
No 217
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=38.90 E-value=1.6e+02 Score=23.94 Aligned_cols=71 Identities=20% Similarity=0.168 Sum_probs=43.3
Q ss_pred HHHHHHhhhhcCCCcEEEEEEec------------CcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-
Q psy9408 11 IESAIRLRESSNKIKEIIAISCG------------NKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE- 77 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G------------~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~- 77 (219)
.+.|++|+++ |.+|+++... ....++..+++-..|.. +..+..| -.|...+.+++.++.++.
T Consensus 42 ~aia~~la~~---G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D-v~~~~~v~~~~~~~~~~~g 116 (299)
T 3t7c_A 42 RSHAITLARE---GADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRR-IIASQVD-VRDFDAMQAAVDDGVTQLG 116 (299)
T ss_dssp HHHHHHHHHT---TCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCC-EEEEECC-TTCHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHC---CCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCc-eEEEECC-CCCHHHHHHHHHHHHHHhC
Confidence 4566777765 4677766543 22233444555556644 4444433 567888888888887775
Q ss_pred CCCEEEEcc
Q psy9408 78 NPQLVILGK 86 (219)
Q Consensus 78 ~~dlVl~G~ 86 (219)
..|+++.-.
T Consensus 117 ~iD~lv~nA 125 (299)
T 3t7c_A 117 RLDIVLANA 125 (299)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 589887544
No 218
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=38.85 E-value=63 Score=27.30 Aligned_cols=11 Identities=27% Similarity=0.359 Sum_probs=5.5
Q ss_pred chHHHHHHHHh
Q psy9408 203 KNVIELIDKLK 213 (219)
Q Consensus 203 ~~~~~l~~~L~ 213 (219)
+.+.+.++.++
T Consensus 342 ~~~~~A~~~~~ 352 (363)
T 3uog_A 342 TEVPEALAHLD 352 (363)
T ss_dssp GGHHHHHHTGG
T ss_pred HHHHHHHHHHH
Confidence 44555555554
No 219
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=38.85 E-value=56 Score=26.37 Aligned_cols=61 Identities=16% Similarity=0.200 Sum_probs=30.3
Q ss_pred HHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcc
Q psy9408 38 KEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQA 109 (219)
Q Consensus 38 ~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~v 109 (219)
...++.+.++|.+ ++.++.+ ..+. ..+++.++|+|+.......+..+.+ ..+.+.+|+|++
T Consensus 24 ~~l~~al~~~G~~-v~~~~~~-~~~~--------~~~~~~~~d~v~~~~~~~~~e~~~~-~~~~e~~g~~~~ 84 (306)
T 1iow_A 24 AAVLAGLREGGID-AYPVDPK-EVDV--------TQLKSMGFQKVFIALHGRGGEDGTL-QGMLELMGLPYT 84 (306)
T ss_dssp HHHHHHHHHTTCE-EEEECTT-TSCG--------GGTTTTTEEEEEECCCSTTTSSSHH-HHHHHHHTCCBS
T ss_pred HHHHHHHHHCCCe-EEEEecC-chHH--------HHhhccCCCEEEEcCCCCCCcchHH-HHHHHHcCCCcc
Confidence 3455666677765 4555432 1111 1122356777776543222222333 456667777765
No 220
>3iv7_A Alcohol dehydrogenase IV; NP_602249.1, iron-containing alcohol dehydrogenase, structur genomics, joint center for structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=38.79 E-value=97 Score=26.65 Aligned_cols=103 Identities=14% Similarity=0.155 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHHHhcCCCEEEE-cccccCCCcCcHHHHHHHHcCCCcccceeEEEEe-eCCeEEEEEEcCCeEEEEEEc-
Q psy9408 63 SLSVAKLLQVIVKKENPQLVIL-GKQSIDSDNNQTGQMLAALLNWPQATFASKIVLK-KNNKILVTQEIEDGKETILLS- 139 (219)
Q Consensus 63 ~~~~A~~la~~ik~~~~dlVl~-G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~~l~~~-~~~~~~~~R~~~gG~~~~~~~- 139 (219)
+......+.+.+++.++|+|+. |..| .-+++-.+|.+.+.|++.=-|.. .. +-+.+.+.. ..+-+..+.-.
T Consensus 73 ~~~~v~~~~~~~~~~~~D~IIavGGGs----~iD~aK~iA~~~~~P~i~IPTTa-tgSe~t~~avi~-~~~~K~~~~~~~ 146 (364)
T 3iv7_A 73 PIEVAERARAVATDNEIDLLVCVGGGS----TIGLAKAIAMTTALPIVAIPTTY-AGSEATNVWGLT-EAARKTTGVDLK 146 (364)
T ss_dssp BHHHHHHHHHHHHHTTCCEEEEEESHH----HHHHHHHHHHHHCCCEEEEECSS-SCGGGCCEEEEE-ETTEEEEEECGG
T ss_pred CHHHHHHHHHHHHhcCCCEEEEeCCcH----HHHHHHHHHhccCCCEEEEcCCc-ccccccCeeEec-CCCeeEeccCCC
Confidence 3555666677778889998764 3333 23488889999999987644433 11 112222222 12334433322
Q ss_pred -CCEEEEEecCCCC--CCCCCHHHHHHHccCcceE
Q psy9408 140 -LPAIITTDLRMNE--PRYVTLMNIIKARKKNINI 171 (219)
Q Consensus 140 -~P~vvtv~~~~~~--pr~p~l~~~~~A~~~~i~~ 171 (219)
.|.++-+.+.... |+.-+....+.+-++-+|.
T Consensus 147 ~~P~~vi~Dp~l~~tlP~~~~aag~~Dal~ha~Ea 181 (364)
T 3iv7_A 147 VLPETVIYDSELTMSLPVEMSVASGLNGLAHCIDS 181 (364)
T ss_dssp GSCSEEEECGGGGTTSCHHHHHHHHHHHHHHHHHH
T ss_pred cCceEEEEChHHHcCCCHHHHHHhHHHHHHHHHHH
Confidence 6888888876543 5555666777777665543
No 221
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=38.76 E-value=1.4e+02 Score=23.36 Aligned_cols=71 Identities=13% Similarity=0.097 Sum_probs=43.8
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|++|+++ |.+|+++.-.+...++..+++-..|.+ +..+..| -.|.+.+..++.++.++. +.|+++.-.
T Consensus 21 ~aia~~l~~~---G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D-v~~~~~~~~~~~~~~~~~g~id~lv~nA 92 (247)
T 2jah_A 21 EATARALAAE---GAAVAIAARRVEKLRALGDELTAAGAK-VHVLELD-VADRQGVDAAVASTVEALGGLDILVNNA 92 (247)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCC-EEEEECC-TTCHHHHHHHHHHHHHHHSCCSEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCCc-EEEEECC-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 3556777775 467777665443334444444455643 4444433 467788888888877765 589888644
No 222
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=38.08 E-value=76 Score=21.73 Aligned_cols=61 Identities=11% Similarity=0.109 Sum_probs=38.0
Q ss_pred HHHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHH
Q psy9408 8 EIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVK 75 (219)
Q Consensus 8 ~~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik 75 (219)
...++...+|++.. +...|+.++--. ..+...+++..|++..+. . .+++......|..+.+
T Consensus 62 ~~g~~~~~~l~~~~-~~~~ii~ls~~~--~~~~~~~~~~~ga~~~l~-K---p~~~~~L~~~i~~~~~ 122 (133)
T 3b2n_A 62 MTGLEVLAEIRKKH-LNIKVIIVTTFK--RPGYFEKAVVNDVDAYVL-K---ERSIEELVETINKVNN 122 (133)
T ss_dssp SCHHHHHHHHHHTT-CSCEEEEEESCC--CHHHHHHHHHTTCSEEEE-T---TSCHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHC-CCCcEEEEecCC--CHHHHHHHHHcCCcEEEE-C---CCCHHHHHHHHHHHHc
Confidence 34566777777653 244566555332 346677888999986443 3 4677777777766654
No 223
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=37.98 E-value=96 Score=24.92 Aligned_cols=71 Identities=11% Similarity=0.103 Sum_probs=41.5
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|++|+++ |.+|+.+.-.....++..+++...|.+ +..+..| -.|...+.+.+.++.++. +.|+++.-.
T Consensus 40 ~aia~~la~~---G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D-v~d~~~v~~~~~~~~~~~g~iD~lv~nA 111 (271)
T 4ibo_A 40 RAMAEGLAVA---GARILINGTDPSRVAQTVQEFRNVGHD-AEAVAFD-VTSESEIIEAFARLDEQGIDVDILVNNA 111 (271)
T ss_dssp HHHHHHHHHT---TCEEEECCSCHHHHHHHHHHHHHTTCC-EEECCCC-TTCHHHHHHHHHHHHHHTCCCCEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhcCCc-eEEEEcC-CCCHHHHHHHHHHHHHHCCCCCEEEECC
Confidence 3456677765 356655443333334445555555644 3333322 457788888888887776 589888654
No 224
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=37.94 E-value=83 Score=24.30 Aligned_cols=72 Identities=14% Similarity=0.123 Sum_probs=42.8
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHH-hCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEccc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAM-AMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGKQ 87 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~-a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~~ 87 (219)
.+.|.+|+++ |.+|+.+.-.....++..+++. ..|. ++..+..| -.|...+.+++.++.++. ++|+++.-..
T Consensus 16 ~~ia~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D-~~~~~~v~~~~~~~~~~~g~id~li~~Ag 89 (235)
T 3l77_A 16 EAIARALARD---GYALALGARSVDRLEKIAHELMQEQGV-EVFYHHLD-VSKAESVEEFSKKVLERFGDVDVVVANAG 89 (235)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECC-TTCHHHHHHHCC-HHHHHSSCSEEEECCC
T ss_pred HHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhhcCC-eEEEEEec-cCCHHHHHHHHHHHHHhcCCCCEEEECCc
Confidence 4567778775 4677666544433344444443 3444 45555533 567788888777777765 5898886543
No 225
>3h5l_A Putative branched-chain amino acid ABC transporter; structural genomics, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi}
Probab=37.87 E-value=91 Score=26.33 Aligned_cols=57 Identities=14% Similarity=0.046 Sum_probs=40.3
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcccce
Q psy9408 53 ILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFA 112 (219)
Q Consensus 53 ~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v 112 (219)
+.+.|+...++........+++.+.+++.|+-+..|. ...-...++...++|+++..
T Consensus 58 l~~~D~~~~~~~~a~~~a~~li~~~~v~aiiG~~~s~---~~~a~~~~~~~~~ip~i~~~ 114 (419)
T 3h5l_A 58 LVFADTQSKGVDVVIQSAQRLIDRDNASALIAGYNLE---NGTALHDVAADAGVIAMHAN 114 (419)
T ss_dssp EEEEECTTCCHHHHHHHHHHHHHTTCCSEEECSCCSS---CSCHHHHHHHHHTCEEEECC
T ss_pred EEEccCCCCCHHHHHHHHHHHhhhcCCeEEEccccch---hHHHhHHHHHHcCCeEEEcC
Confidence 3444443468888888888889888999998555542 23345568888999999754
No 226
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=37.85 E-value=1.7e+02 Score=24.03 Aligned_cols=71 Identities=17% Similarity=0.227 Sum_probs=38.5
Q ss_pred HHHHHHhhhhcCCCcEEEEEEec------------CcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-
Q psy9408 11 IESAIRLRESSNKIKEIIAISCG------------NKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE- 77 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G------------~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~- 77 (219)
.+.|++|+++ |.+|+++... ....++..+.+...|.. +..+..| -.|...+.+++.++.++.
T Consensus 60 ~aia~~la~~---G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D-v~d~~~v~~~~~~~~~~~g 134 (317)
T 3oec_A 60 RTHAVRLAQD---GADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRR-IIARQAD-VRDLASLQAVVDEALAEFG 134 (317)
T ss_dssp HHHHHHHHHT---TCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCC-EEEEECC-TTCHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHC---CCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCe-EEEEECC-CCCHHHHHHHHHHHHHHcC
Confidence 3455666654 3566665432 11122333334444543 3444323 457777777787777765
Q ss_pred CCCEEEEcc
Q psy9408 78 NPQLVILGK 86 (219)
Q Consensus 78 ~~dlVl~G~ 86 (219)
..|+++.-.
T Consensus 135 ~iD~lVnnA 143 (317)
T 3oec_A 135 HIDILVSNV 143 (317)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 578887654
No 227
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=37.68 E-value=1.5e+02 Score=23.56 Aligned_cols=72 Identities=17% Similarity=0.175 Sum_probs=41.8
Q ss_pred HHHHHHhhhhcCCCcEEEEEEe-------------cCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc
Q psy9408 11 IESAIRLRESSNKIKEIIAISC-------------GNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE 77 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~-------------G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~ 77 (219)
.+.|++|+++ |.+|+++.. .....++..+.....|.. +..+..| -.|...+.+.+.++.++.
T Consensus 29 ~a~a~~la~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D-v~~~~~v~~~~~~~~~~~ 103 (280)
T 3pgx_A 29 RSHAVRLAAE---GADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRK-ALTRVLD-VRDDAALRELVADGMEQF 103 (280)
T ss_dssp HHHHHHHHHT---TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCC-EEEEECC-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHC---CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCe-EEEEEcC-CCCHHHHHHHHHHHHHHc
Confidence 4556777765 467776654 122223334444445544 4444423 467788888888877776
Q ss_pred -CCCEEEEccc
Q psy9408 78 -NPQLVILGKQ 87 (219)
Q Consensus 78 -~~dlVl~G~~ 87 (219)
+.|+++.-..
T Consensus 104 g~id~lvnnAg 114 (280)
T 3pgx_A 104 GRLDVVVANAG 114 (280)
T ss_dssp CCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 5898886543
No 228
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=37.66 E-value=1.5e+02 Score=23.40 Aligned_cols=60 Identities=13% Similarity=0.096 Sum_probs=41.1
Q ss_pred cEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcc
Q psy9408 25 KEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGK 86 (219)
Q Consensus 25 ~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~ 86 (219)
.+|.+|.--++.+ ..++.|..+|..- +.++.....+...+-..+.+.+++.+||+|++-.
T Consensus 28 ~~i~~Vis~~~~~-~~~~~A~~~gIp~-~~~~~~~~~~r~~~~~~~~~~l~~~~~Dliv~ag 87 (212)
T 1jkx_A 28 GTVRAVFSNKADA-FGLERARQAGIAT-HTLIASAFDSREAYDRELIHEIDMYAPDVVVLAG 87 (212)
T ss_dssp SEEEEEEESCTTC-HHHHHHHHTTCEE-EECCGGGCSSHHHHHHHHHHHHGGGCCSEEEESS
T ss_pred ceEEEEEeCCCch-HHHHHHHHcCCcE-EEeCcccccchhhccHHHHHHHHhcCCCEEEEeC
Confidence 5787777665543 4577788899874 3333222235566677788889999999999865
No 229
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=37.65 E-value=1.5e+02 Score=23.38 Aligned_cols=72 Identities=13% Similarity=0.083 Sum_probs=42.9
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEccc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGKQ 87 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~~ 87 (219)
.+.|.+|+++ |.+|+++.-.....++..+++...|. ++..+..| -.|.+.+..++.++.++. .+|+++....
T Consensus 43 ~~la~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D-~~~~~~v~~~~~~~~~~~g~id~lv~~Ag 115 (262)
T 3rkr_A 43 AAIARKLGSL---GARVVLTARDVEKLRAVEREIVAAGG-EAESHACD-LSHSDAIAAFATGVLAAHGRCDVLVNNAG 115 (262)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECC-TTCHHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred HHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHHhCC-ceeEEEec-CCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 4556677765 36766654443333444445555554 34444433 467778888888877765 5898886543
No 230
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=37.65 E-value=1.6e+02 Score=24.04 Aligned_cols=89 Identities=8% Similarity=0.079 Sum_probs=47.5
Q ss_pred HHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCC-CEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEccc
Q psy9408 9 IAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGV-DRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQ 87 (219)
Q Consensus 9 ~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~Ga-D~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~ 87 (219)
..+++..++.++. ..+..+.+|.+...+.+++.. .|. +.+.+.. ..+.+.+.. +.+ ..|++++...
T Consensus 215 ~li~a~~~l~~~~---~~~~l~i~G~g~~~~~l~~~~-~~~~~~v~~~g---~~~~~~~~~----~~~--~ad~~v~ps~ 281 (394)
T 3okp_A 215 SLIKAMPQVIAAR---PDAQLLIVGSGRYESTLRRLA-TDVSQNVKFLG---RLEYQDMIN----TLA--AADIFAMPAR 281 (394)
T ss_dssp HHHHHHHHHHHHS---TTCEEEEECCCTTHHHHHHHT-GGGGGGEEEEE---SCCHHHHHH----HHH--HCSEEEECCC
T ss_pred HHHHHHHHHHhhC---CCeEEEEEcCchHHHHHHHHH-hcccCeEEEcC---CCCHHHHHH----HHH--hCCEEEecCc
Confidence 3556666666652 234455666554455566555 554 4555544 223333333 332 3688888765
Q ss_pred ccC----CCcCcHHHHHHHHcCCCccc
Q psy9408 88 SID----SDNNQTGQMLAALLNWPQAT 110 (219)
Q Consensus 88 s~d----~~~~~v~~~lA~~Lg~p~vt 110 (219)
... .++.-+...=|...|.|+|+
T Consensus 282 ~~~~~~~~e~~~~~~~Ea~a~G~PvI~ 308 (394)
T 3okp_A 282 TRGGGLDVEGLGIVYLEAQACGVPVIA 308 (394)
T ss_dssp CBGGGTBCCSSCHHHHHHHHTTCCEEE
T ss_pred cccccccccccCcHHHHHHHcCCCEEE
Confidence 510 02333556667788888775
No 231
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=37.25 E-value=1.8e+02 Score=24.29 Aligned_cols=25 Identities=12% Similarity=0.062 Sum_probs=16.7
Q ss_pred CCCEEEEcccccCCCcCcHHHHHHHHcCCCccc
Q psy9408 78 NPQLVILGKQSIDSDNNQTGQMLAALLNWPQAT 110 (219)
Q Consensus 78 ~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt 110 (219)
..|+++...+ =+..+|..+|.|.++
T Consensus 261 ~a~~~i~~Ds--------G~~HlAaa~g~P~v~ 285 (349)
T 3tov_A 261 RCNLLITNDS--------GPMHVGISQGVPIVA 285 (349)
T ss_dssp TCSEEEEESS--------HHHHHHHTTTCCEEE
T ss_pred hCCEEEECCC--------CHHHHHHhcCCCEEE
Confidence 4567665443 356778889999773
No 232
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=37.23 E-value=1.7e+02 Score=23.95 Aligned_cols=53 Identities=13% Similarity=0.055 Sum_probs=38.7
Q ss_pred hHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcC-CCEEEEccccc
Q psy9408 37 CKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKEN-PQLVILGKQSI 89 (219)
Q Consensus 37 ~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~-~dlVl~G~~s~ 89 (219)
+.+.++.+..+|+|.+.+.+.-....|..+.+.+..+.+..+ ..+.+=++...
T Consensus 157 ~~~~~~~~~~~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~ 210 (295)
T 1ydn_A 157 VASVTEQLFSLGCHEVSLGDTIGRGTPDTVAAMLDAVLAIAPAHSLAGHYHDTG 210 (295)
T ss_dssp HHHHHHHHHHHTCSEEEEEETTSCCCHHHHHHHHHHHHTTSCGGGEEEEEBCTT
T ss_pred HHHHHHHHHhcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCc
Confidence 455667777999998888764335689999999888877664 44777776543
No 233
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=37.09 E-value=1e+02 Score=24.28 Aligned_cols=72 Identities=17% Similarity=0.064 Sum_probs=41.4
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcch-HHHHHHHHh-CCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEccc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKC-KEILQIAMA-MGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGKQ 87 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~-~~~lr~~~a-~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~~ 87 (219)
.+.|++|++. |.+|+.+.-..... ++.++++.. +| .++..+..| -.|...+.+++.++.++. ..|+++....
T Consensus 36 ~~~a~~l~~~---G~~v~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~D-l~~~~~v~~~~~~~~~~~g~id~li~nAg 110 (267)
T 3gdg_A 36 IEAARGCAEM---GAAVAITYASRAQGAEENVKELEKTYG-IKAKAYKCQ-VDSYESCEKLVKDVVADFGQIDAFIANAG 110 (267)
T ss_dssp HHHHHHHHHT---SCEEEECBSSSSSHHHHHHHHHHHHHC-CCEECCBCC-TTCHHHHHHHHHHHHHHTSCCSEEEECCC
T ss_pred HHHHHHHHHC---CCeEEEEeCCcchhHHHHHHHHHHhcC-CceeEEecC-CCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 4456677664 35666555444332 344444433 24 334444433 457777888888777775 5798886553
No 234
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=36.63 E-value=1.1e+02 Score=26.31 Aligned_cols=84 Identities=14% Similarity=0.177 Sum_probs=55.6
Q ss_pred cEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCC----C------CCH----HHHHHHHHHHHHhc-------------
Q psy9408 25 KEIIAISCGNKKCKEILQIAMAMGVDRAILIETDT----I------LQS----LSVAKLLQVIVKKE------------- 77 (219)
Q Consensus 25 ~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~----~------~d~----~~~A~~la~~ik~~------------- 77 (219)
.+|..+-.|+-. -..++.+...|+-++.++++|. + +.. ..-+.++++.+++.
T Consensus 35 ~~VlIvGaGGlG-s~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~~~~i 113 (340)
T 3rui_A 35 TKVLLLGAGTLG-CYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLSI 113 (340)
T ss_dssp CEEEEECCSHHH-HHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEECCCC
T ss_pred CEEEEECCCHHH-HHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEEeccc
Confidence 477777777654 4678889999999999998753 1 110 11233333333322
Q ss_pred -------------------------CCCEEEEcccccCCCcCcHHHHHHHHcCCCcccc
Q psy9408 78 -------------------------NPQLVILGKQSIDSDNNQTGQMLAALLNWPQATF 111 (219)
Q Consensus 78 -------------------------~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~ 111 (219)
++|+|+...-+. .++......+..++.|+++.
T Consensus 114 ~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn~--~tR~lin~~c~~~~~plI~a 170 (340)
T 3rui_A 114 PMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSR--ESRWLPSLLSNIENKTVINA 170 (340)
T ss_dssp CCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSST--GGGHHHHHHHHHTTCEEEEE
T ss_pred cccCcccchhhhhcCCHHHHHhhhccCCEEEecCCCH--HHHHHHHHHHHHcCCcEEEe
Confidence 367777655443 57888899999999999974
No 235
>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A
Probab=36.48 E-value=66 Score=24.28 Aligned_cols=79 Identities=8% Similarity=0.064 Sum_probs=43.8
Q ss_pred cEEEEEEecCcch--------HHHHHH-HHhC-----CCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEE-ccccc
Q psy9408 25 KEIIAISCGNKKC--------KEILQI-AMAM-----GVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVIL-GKQSI 89 (219)
Q Consensus 25 ~~V~av~~G~~~~--------~~~lr~-~~a~-----GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~-G~~s~ 89 (219)
-+|..++.|.+-. ...+.+ +-+. |++-....-- .-|.+.+.++|.++++..++|+|++ |.++.
T Consensus 6 ~rv~IistGde~~~G~~~d~n~~~l~~~l~~~~~~~~G~~v~~~~iv--~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~ 83 (167)
T 1uuy_A 6 YKVAILTVSDTVSAGAGPDRSGPRAVSVVDSSSEKLGGAKVVATAVV--PDEVERIKDILQKWSDVDEMDLILTLGGTGF 83 (167)
T ss_dssp EEEEEEEECHHHHTTSSCCSHHHHHHHHHHHTTTTTTSEEEEEEEEE--CSCHHHHHHHHHHHHHTSCCSEEEEESCCSS
T ss_pred cEEEEEEECCcccCCCCccCcHHHHHHHHHhccccCCCcEEeEEEEc--CCCHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 3677777775310 113333 3345 7754332111 2356788888888876557898776 55554
Q ss_pred CCCcCcHHHHHHHHcCC
Q psy9408 90 DSDNNQTGQMLAALLNW 106 (219)
Q Consensus 90 d~~~~~v~~~lA~~Lg~ 106 (219)
+ ..-.+...++..++.
T Consensus 84 g-~~D~t~~a~~~~~~~ 99 (167)
T 1uuy_A 84 T-PRDVTPEATKKVIER 99 (167)
T ss_dssp S-TTCCHHHHHHHHCSE
T ss_pred C-CCCchHHHHHHHhcC
Confidence 4 334556666666544
No 236
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=36.33 E-value=1.5e+02 Score=23.89 Aligned_cols=71 Identities=14% Similarity=0.162 Sum_probs=40.7
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCc-chHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNK-KCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~-~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|++|+++ |.+|+++..... ..++..+++...|.. +..+..| -.|...+.+++.++.++. +.|+++.-.
T Consensus 43 ~aia~~la~~---G~~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D-v~d~~~v~~~~~~~~~~~g~iD~lvnnA 115 (280)
T 4da9_A 43 LGIARALAAS---GFDIAITGIGDAEGVAPVIAELSGLGAR-VIFLRAD-LADLSSHQATVDAVVAEFGRIDCLVNNA 115 (280)
T ss_dssp HHHHHHHHHT---TCEEEEEESCCHHHHHHHHHHHHHTTCC-EEEEECC-TTSGGGHHHHHHHHHHHHSCCCEEEEEC
T ss_pred HHHHHHHHHC---CCeEEEEeCCCHHHHHHHHHHHHhcCCc-EEEEEec-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 3456677765 467766554332 233444555555644 4444433 456667777777777665 578887654
No 237
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=36.14 E-value=1.6e+02 Score=23.98 Aligned_cols=25 Identities=20% Similarity=0.181 Sum_probs=17.2
Q ss_pred CCCEEEEcccccCCCcCcHHHHHHHHcCCCccc
Q psy9408 78 NPQLVILGKQSIDSDNNQTGQMLAALLNWPQAT 110 (219)
Q Consensus 78 ~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt 110 (219)
..|+++...+ =+..+|..+|.|.+.
T Consensus 261 ~a~l~I~~Ds--------g~~HlAaa~g~P~v~ 285 (348)
T 1psw_A 261 ACKAIVTNDS--------GLMHVAAALNRPLVA 285 (348)
T ss_dssp TSSEEEEESS--------HHHHHHHHTTCCEEE
T ss_pred hCCEEEecCC--------HHHHHHHHcCCCEEE
Confidence 4577775443 346779999999773
No 238
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=36.06 E-value=1.5e+02 Score=22.89 Aligned_cols=72 Identities=15% Similarity=0.095 Sum_probs=45.9
Q ss_pred HHHHHHhhhhcCCCcEEEEEEec-CcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEccc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCG-NKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGKQ 87 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G-~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~~ 87 (219)
...+.+|.++ |.+|+++.-. +...++..+++...|. ++..+..| -.|++.+..++.++.++. ++|+|+.-..
T Consensus 21 ~~~a~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D-~~~~~~~~~~~~~~~~~~g~id~vi~~Ag 94 (258)
T 3afn_B 21 LATARLFARA---GAKVGLHGRKAPANIDETIASMRADGG-DAAFFAAD-LATSEACQQLVDEFVAKFGGIDVLINNAG 94 (258)
T ss_dssp HHHHHHHHHT---TCEEEEEESSCCTTHHHHHHHHHHTTC-EEEEEECC-TTSHHHHHHHHHHHHHHHSSCSEEEECCC
T ss_pred HHHHHHHHHC---CCEEEEECCCchhhHHHHHHHHHhcCC-ceEEEECC-CCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 3456677765 4688877665 4444455555555553 45555533 467888888888877776 5899886543
No 239
>3mvn_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamayl-M diaminopimelate ligase; structural genomics, MCSG, PSI-2; 1.90A {Haemophilus ducreyi}
Probab=35.98 E-value=1.3e+02 Score=22.27 Aligned_cols=92 Identities=21% Similarity=0.293 Sum_probs=42.9
Q ss_pred CHhhHHHHHHHHHhhhhcCCCcEEEEEEecCcch----H---HHHHHHHhCCCCEEEEEecCCC-CCHH-----------
Q psy9408 4 NPFDEIAIESAIRLRESSNKIKEIIAISCGNKKC----K---EILQIAMAMGVDRAILIETDTI-LQSL----------- 64 (219)
Q Consensus 4 Np~D~~Ale~A~~l~e~~g~g~~V~av~~G~~~~----~---~~lr~~~a~GaD~v~~v~~~~~-~d~~----------- 64 (219)
||.-..++-.+++ +..+ +.++++| +|+... . ..+..++ .++|.+|+...... .+..
T Consensus 46 nP~si~a~l~al~--~~~~-~~riivv-f~~g~~s~r~k~~~~~~~~~~-~~aD~vi~~~~~~~~~~~~~~~~~~~~~~~ 120 (163)
T 3mvn_A 46 HPTAITATIDALR--AKVG-QQRILAV-LEPRSNTMKMGVHKHELATSL-QDADSVFIYQPPTIEWQVSEVLANLAQPAI 120 (163)
T ss_dssp SHHHHHHHHHHHH--HHHT-TSCEEEE-ECCC---------CHHHHHHH-TTCSEEEEECC----CCHHHHHTTCCSCEE
T ss_pred CHHHHHHHHHHHH--HhcC-CCcEEEE-ECCCCcchhhHHHHHHHHHHH-hcCCEEEEECCCCcccCHHHHHhhCCCCeE
Confidence 4554444444433 1122 3477765 465321 1 2233344 36999999762210 0111
Q ss_pred ---HHHHHHHHHHHhcCC-CEEE-EcccccCCCcCcHHHHHHHHc
Q psy9408 65 ---SVAKLLQVIVKKENP-QLVI-LGKQSIDSDNNQTGQMLAALL 104 (219)
Q Consensus 65 ---~~A~~la~~ik~~~~-dlVl-~G~~s~d~~~~~v~~~lA~~L 104 (219)
....++..+.+..++ |+|| +|..+. ..++..|...|
T Consensus 121 ~~~d~~eai~~~~~~~~~gDvVLv~Gsg~~----~~~~~~l~~~l 161 (163)
T 3mvn_A 121 SADDVDELVMRIVQQAKPNDHILIMSNGAF----GGIHQKLLTAL 161 (163)
T ss_dssp EESSHHHHHHHHHHHCCTTCEEEEECSSCG----GGHHHHHHHHT
T ss_pred EECCHHHHHHHHHHhCCCCCEEEEECCCCH----HHHHHHHHHHH
Confidence 122344444444343 6554 566544 45777777765
No 240
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=35.85 E-value=1.7e+02 Score=23.42 Aligned_cols=71 Identities=11% Similarity=0.108 Sum_probs=42.0
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCc-chHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNK-KCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~-~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|++|+++ |.+|+.+..-.. ..++...++-..|.. +..+..| -.|.+.+.+++.++.++. +.|+++.-.
T Consensus 45 ~aia~~la~~---G~~V~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~D-v~d~~~v~~~~~~~~~~~g~iD~lvnnA 117 (271)
T 3v2g_A 45 AAIAKRLALE---GAAVALTYVNAAERAQAVVSEIEQAGGR-AVAIRAD-NRDAEAIEQAIRETVEALGGLDILVNSA 117 (271)
T ss_dssp HHHHHHHHHT---TCEEEEEESSCHHHHHHHHHHHHHTTCC-EEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEeCCCHHHHHHHHHHHHhcCCc-EEEEECC-CCCHHHHHHHHHHHHHHcCCCcEEEECC
Confidence 3456677765 356665543332 223344444455654 4444433 567888888888888776 589888654
No 241
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=35.81 E-value=1.6e+02 Score=23.21 Aligned_cols=71 Identities=7% Similarity=0.067 Sum_probs=42.2
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhC--CCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAM--GVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~--GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|++|+++ |.+|+++.-.+...++..+++... |. ++..+..| -.|.+.+.+++.++.++. +.|+++.-.
T Consensus 27 ~~ia~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~D-~~~~~~v~~~~~~~~~~~g~id~lv~nA 100 (267)
T 1iy8_A 27 RATAVRLAAE---GAKLSLVDVSSEGLEASKAAVLETAPDA-EVLTTVAD-VSDEAQVEAYVTATTERFGRIDGFFNNA 100 (267)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHCTTC-CEEEEECC-TTSHHHHHHHHHHHHHHHSCCSEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhhcCCc-eEEEEEcc-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 4556777765 467777655443333333333333 43 34444433 467788888888877776 589888654
No 242
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=35.53 E-value=1.6e+02 Score=23.57 Aligned_cols=71 Identities=15% Similarity=0.111 Sum_probs=39.9
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhC-CCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAM-GVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~-GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
...|.+|+++ |.+|+++.-.+...++..+++... |. ++..+..| -.|...+.+++.++.++. .+|+|+.-.
T Consensus 40 ~~la~~L~~~---G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~D-l~~~~~~~~~~~~~~~~~g~id~li~~A 112 (302)
T 1w6u_A 40 KGMTTLLSSL---GAQCVIASRKMDVLKATAEQISSQTGN-KVHAIQCD-VRDPDMVQNTVSELIKVAGHPNIVINNA 112 (302)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHHSS-CEEEEECC-TTCHHHHHHHHHHHHHHTCSCSEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHHhcCC-ceEEEEeC-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 3456666664 367766554433223333333222 43 34444433 457778888888777765 479888654
No 243
>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A*
Probab=35.45 E-value=38 Score=26.16 Aligned_cols=41 Identities=12% Similarity=0.082 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcc
Q psy9408 65 SVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQA 109 (219)
Q Consensus 65 ~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~v 109 (219)
..+..|++.+++.++|+|+.-. ..+-.++..+|..||+|++
T Consensus 40 ~l~~~la~~~~~~~~d~Iv~v~----~rG~~~a~~la~~l~~p~~ 80 (197)
T 1y0b_A 40 RIGDEFASRFAKDGITKIVTIE----SSGIAPAVMTGLKLGVPVV 80 (197)
T ss_dssp HHHHHHHHHTTTTTCCEEEEET----TTTHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHhhcCCCCEEEEEc----ccCHHHHHHHHHHhCCCEE
Confidence 4444455555444678777533 2345789999999999974
No 244
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=35.42 E-value=1.7e+02 Score=23.33 Aligned_cols=71 Identities=14% Similarity=0.210 Sum_probs=41.9
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCc-chHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNK-KCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~-~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|++|+++ |.+|+.+.--.. ..++...++...|. ++..+..| -.|...+.+++.++.++. +.|+++.-.
T Consensus 42 ~aia~~la~~---G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D-~~d~~~v~~~~~~~~~~~g~id~lv~nA 114 (269)
T 4dmm_A 42 RAIALELAAA---GAKVAVNYASSAGAADEVVAAIAAAGG-EAFAVKAD-VSQESEVEALFAAVIERWGRLDVLVNNA 114 (269)
T ss_dssp HHHHHHHHHT---TCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECC-TTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEeCCChHHHHHHHHHHHhcCC-cEEEEECC-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 3456777765 467765544222 22333444445554 34444433 567888888888887776 589888654
No 245
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=35.15 E-value=1.7e+02 Score=23.16 Aligned_cols=71 Identities=18% Similarity=0.236 Sum_probs=43.0
Q ss_pred HHHHHHhhhhcCCCcEEEEE-EecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAI-SCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av-~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
...|++|+++ |.+|+.+ .-.....++..+++...|.+ +..+..| -.|...+.+++.++.++. ++|+++.-.
T Consensus 18 ~aia~~l~~~---G~~vv~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D-v~~~~~v~~~~~~~~~~~g~id~lv~nA 90 (258)
T 3oid_A 18 KAAAIRLAEN---GYNIVINYARSKKAALETAEEIEKLGVK-VLVVKAN-VGQPAKIKEMFQQIDETFGRLDVFVNNA 90 (258)
T ss_dssp HHHHHHHHHT---TCEEEEEESSCHHHHHHHHHHHHTTTCC-EEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEcCCCHHHHHHHHHHHHhcCCc-EEEEEcC-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 4567777775 4677654 22222233444455555654 4444433 568888888888887775 589888654
No 246
>4gnr_A ABC transporter substrate-binding protein-branche amino acid transport; amino acid-binding protein, surface-exposed protein; HET: MLY; 1.00A {Streptococcus pneumoniae}
Probab=35.13 E-value=56 Score=26.85 Aligned_cols=60 Identities=12% Similarity=0.070 Sum_probs=41.8
Q ss_pred EEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCccccee
Q psy9408 51 RAILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFAS 113 (219)
Q Consensus 51 ~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~ 113 (219)
++-++.-|...++.....+..+++.+.+.++|+.+..|. ...-...++...++|+++...
T Consensus 48 ~ielv~~D~~~~p~~a~~~a~~li~~~~v~~i~g~~~s~---~~~a~~~~~~~~~vp~i~~~~ 107 (353)
T 4gnr_A 48 QIEVVDKDNKSETAEAASVTTNLVTQSKVSAVVGPATSG---ATAAAVANATKAGVPLISPSA 107 (353)
T ss_dssp EEEEEEEECTTCHHHHHHHHHHHHHTSCCSEEECCCSHH---HHHHHHHHHHHTTCCEEESSC
T ss_pred EEEEEEecCCCCHHHHHHHHHHHHhhCCceEEeccccCc---ccceehhhhhccCcceEeecc
Confidence 343333344688998888888999888888887666553 233445678899999987543
No 247
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=35.11 E-value=1.1e+02 Score=21.33 Aligned_cols=63 Identities=14% Similarity=0.017 Sum_probs=39.1
Q ss_pred hHHHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCC-CCEEEEEecCCCCCHHHHHHHHHHHHHh
Q psy9408 7 DEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMG-VDRAILIETDTILQSLSVAKLLQVIVKK 76 (219)
Q Consensus 7 D~~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~G-aD~v~~v~~~~~~d~~~~A~~la~~ik~ 76 (219)
+...++...+|++.. +...+++++-. ...+...+++..| ++..+. . .++.......|..+++.
T Consensus 60 ~~~g~~~~~~l~~~~-~~~~ii~~s~~--~~~~~~~~~~~~g~~~~~l~-K---P~~~~~L~~~i~~~l~~ 123 (151)
T 3kcn_A 60 GMEGTEVIQKARLIS-PNSVYLMLTGN--QDLTTAMEAVNEGQVFRFLN-K---PCQMSDIKAAINAGIKQ 123 (151)
T ss_dssp SSCHHHHHHHHHHHC-SSCEEEEEECG--GGHHHHHHHHHHTCCSEEEE-S---SCCHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHhcC-CCcEEEEEECC--CCHHHHHHHHHcCCeeEEEc-C---CCCHHHHHHHHHHHHHH
Confidence 344566777777764 34455555433 3356678888889 776543 3 46777777777766653
No 248
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=35.10 E-value=32 Score=30.95 Aligned_cols=48 Identities=23% Similarity=0.282 Sum_probs=31.6
Q ss_pred CHHHHHHHHHHHHHh-cCCCEEEEcccccCCCcCcHHHHHHHHcCCCc-ccc
Q psy9408 62 QSLSVAKLLQVIVKK-ENPQLVILGKQSIDSDNNQTGQMLAALLNWPQ-ATF 111 (219)
Q Consensus 62 d~~~~A~~la~~ik~-~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~-vt~ 111 (219)
++..+.++ ++.+++ ..| +|++|......+..+---.+|+++|+|+ ++.
T Consensus 186 ~~~~i~~~-~~~l~~a~rp-vil~G~g~~~~~a~~~l~~lae~~~~Pv~~~~ 235 (528)
T 1q6z_A 186 NDQDLDIL-VKALNSASNP-AIVLGPDVDAANANADCVMLAERLKAPVWVAP 235 (528)
T ss_dssp CHHHHHHH-HHHHHHCSSC-EEEECHHHHHTTCHHHHHHHHHHHTCCEEECS
T ss_pred CHHHHHHH-HHHHhcCCCe-EEEECCccchhhHHHHHHHHHHHHCCCEEEec
Confidence 44444443 444444 445 9999987654444567789999999998 443
No 249
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=34.91 E-value=1.6e+02 Score=22.99 Aligned_cols=65 Identities=15% Similarity=0.185 Sum_probs=43.9
Q ss_pred hhHHHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcC
Q psy9408 6 FDEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKEN 78 (219)
Q Consensus 6 ~D~~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~ 78 (219)
.|...++...+|++. +...|++++--. ..+...+++..|++..+. . .++++....+|..+++...
T Consensus 92 p~~~G~~l~~~lr~~--~~~~iI~lt~~~--~~~~~~~a~~~Ga~~yl~-K---p~~~~~L~~~i~~~l~~~~ 156 (249)
T 3q9s_A 92 PDFDGGDVVQRLRKN--SALPIIVLTARD--TVEEKVRLLGLGADDYLI-K---PFHPDELLARVKVQLRQRT 156 (249)
T ss_dssp CHHHHHHHHHHHHTT--CCCCEEEEESCC--SHHHHHHHHHHTCSEEEE-S---SCCHHHHHHHHHHHHCCCC
T ss_pred CCCCHHHHHHHHHcC--CCCCEEEEECCC--CHHHHHHHHHCCCcEEEE-C---CCCHHHHHHHHHHHHhhcc
Confidence 356778888888863 245676666443 356678899999996443 3 4677777777777776443
No 250
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=34.91 E-value=77 Score=21.66 Aligned_cols=63 Identities=3% Similarity=0.006 Sum_probs=40.8
Q ss_pred hHHHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHh
Q psy9408 7 DEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKK 76 (219)
Q Consensus 7 D~~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~ 76 (219)
+...++...+|++.. ....+++++--. ..+....++..|++..+. . .++.......|..+++.
T Consensus 64 ~~~g~~~~~~l~~~~-~~~~ii~ls~~~--~~~~~~~~~~~g~~~~l~-k---p~~~~~l~~~l~~~~~~ 126 (140)
T 2qr3_A 64 GNEGLFWLHEIKRQY-RDLPVVLFTAYA--DIDLAVRGIKEGASDFVV-K---PWDNQKLLETLLNAASQ 126 (140)
T ss_dssp -CCHHHHHHHHHHHC-TTCCEEEEEEGG--GHHHHHHHHHTTCCEEEE-E---SCCHHHHHHHHHHHHTC
T ss_pred CccHHHHHHHHHhhC-cCCCEEEEECCC--CHHHHHHHHHcCchheee-C---CCCHHHHHHHHHHHHHh
Confidence 445566777777763 345666665433 356678899999987543 3 46777777777777654
No 251
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=34.89 E-value=87 Score=26.56 Aligned_cols=68 Identities=10% Similarity=0.128 Sum_probs=40.1
Q ss_pred HHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCC--CEEEEcccccCCCcCcHHHHHHH-HcCC
Q psy9408 38 KEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENP--QLVILGKQSIDSDNNQTGQMLAA-LLNW 106 (219)
Q Consensus 38 ~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~--dlVl~G~~s~d~~~~~v~~~lA~-~Lg~ 106 (219)
.+.++.+..+|+|.+.+.+.-....|..+.+.+..+.+..+. ++.|--+.- +..+-.++-.+|+ ..|+
T Consensus 154 ~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~i~~H~H-nd~GlA~AN~laA~~aGa 224 (325)
T 3eeg_A 154 ARMVEAVIEAGADVVNIPDTTGYMLPWQYGERIKYLMDNVSNIDKAILSAHCH-NDLGLATANSLAALQNGA 224 (325)
T ss_dssp HHHHHHHHHHTCSEEECCBSSSCCCHHHHHHHHHHHHHHCSCGGGSEEEECBC-CTTSCHHHHHHHHHHHTC
T ss_pred HHHHHHHHhcCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCCCceEEEEEeC-CCCCHHHHHHHHHHHhCC
Confidence 456777888899976665543356888888888877666541 233332332 2233445555554 4444
No 252
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=34.45 E-value=1.2e+02 Score=23.98 Aligned_cols=59 Identities=17% Similarity=0.215 Sum_probs=39.4
Q ss_pred EEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcc
Q psy9408 26 EIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGK 86 (219)
Q Consensus 26 ~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~ 86 (219)
+|.+|.-.++.+ ..++.|..+|..-. .++.....+-..+-..+.+.+++.+||+|++-.
T Consensus 30 ~i~~Vvs~~~~~-~~~~~A~~~gIp~~-~~~~~~~~~r~~~~~~~~~~l~~~~~Dliv~a~ 88 (216)
T 2ywr_A 30 SIELVISDNPKA-YAIERCKKHNVECK-VIQRKEFPSKKEFEERMALELKKKGVELVVLAG 88 (216)
T ss_dssp EEEEEEESCTTC-HHHHHHHHHTCCEE-ECCGGGSSSHHHHHHHHHHHHHHTTCCEEEESS
T ss_pred eEEEEEeCCCCh-HHHHHHHHcCCCEE-EeCcccccchhhhhHHHHHHHHhcCCCEEEEeC
Confidence 777776665443 45677888898843 333221234556667788888999999999755
No 253
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=34.20 E-value=93 Score=27.62 Aligned_cols=64 Identities=5% Similarity=-0.041 Sum_probs=46.6
Q ss_pred CcEEEEEEecCcchHHHHHHHHhCCCCE---------------------EEEEecCCCCCHHHHHHHHHHHHHhcCCCEE
Q psy9408 24 IKEIIAISCGNKKCKEILQIAMAMGVDR---------------------AILIETDTILQSLSVAKLLQVIVKKENPQLV 82 (219)
Q Consensus 24 g~~V~av~~G~~~~~~~lr~~~a~GaD~---------------------v~~v~~~~~~d~~~~A~~la~~ik~~~~dlV 82 (219)
|..|.+++-|+..+......+..+|.+- .--++-....+++.|.++|..+++..+.|.|
T Consensus 293 g~rvaiitngGG~~~laaD~~~~~Gl~l~~l~~~t~~~L~~~lp~~~~~~NPlDl~g~a~~~~~~~al~~~l~dp~vd~v 372 (457)
T 2csu_A 293 GNKVAIMTNAGGPGVLTADELDKRGLKLATLEEKTIEELRSFLPPMAAVKNPVDMIASARGEDYYRTAKLLLQDPNVDML 372 (457)
T ss_dssp SSEEEEEESCHHHHHHHHHHHHTTTCEECCCCHHHHHHHHHHSCTTCEESSEEECCTTCCHHHHHHHHHHHHHSTTCSEE
T ss_pred CCcEEEEECCHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHhCccccccCCCeeCCCCCCHHHHHHHHHHHhcCCCCCEE
Confidence 5689999999876666666777777751 1122222357899999999999998899988
Q ss_pred EEccc
Q psy9408 83 ILGKQ 87 (219)
Q Consensus 83 l~G~~ 87 (219)
|+-..
T Consensus 373 lv~~~ 377 (457)
T 2csu_A 373 IAICV 377 (457)
T ss_dssp EEEEE
T ss_pred EEEcc
Confidence 87553
No 254
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=33.63 E-value=1.1e+02 Score=20.85 Aligned_cols=62 Identities=10% Similarity=0.110 Sum_probs=37.2
Q ss_pred HHHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHH
Q psy9408 8 EIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVK 75 (219)
Q Consensus 8 ~~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik 75 (219)
...++...+|++..+....|+.++--. ..+...+++..|++..+ .. .++......+|.++++
T Consensus 65 ~~G~~~~~~lr~~~~~~~~ii~lt~~~--~~~~~~~~~~~ga~~~l-~K---P~~~~~L~~~l~~~~~ 126 (133)
T 2r25_B 65 VDGLLSTKMIRRDLGYTSPIVALTAFA--DDSNIKECLESGMNGFL-SK---PIKRPKLKTILTEFCA 126 (133)
T ss_dssp SCHHHHHHHHHHHSCCCSCEEEEESCC--SHHHHHHHHHTTCSEEE-ES---SCCHHHHHHHHHHHCT
T ss_pred CChHHHHHHHHhhcCCCCCEEEEECCC--CHHHHHHHHHcCCCEEE-eC---CCCHHHHHHHHHHHHH
Confidence 345677777776422234566555433 24567788889998643 33 4677777777666554
No 255
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=33.44 E-value=1.1e+02 Score=20.53 Aligned_cols=61 Identities=11% Similarity=0.015 Sum_probs=36.5
Q ss_pred HHHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHH
Q psy9408 8 EIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVK 75 (219)
Q Consensus 8 ~~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik 75 (219)
...++...+|++.. +...++.++-.. ..+....++..|++.. +.. .++......+|..+.+
T Consensus 60 ~~g~~~~~~l~~~~-~~~~ii~~s~~~--~~~~~~~~~~~ga~~~-l~K---p~~~~~l~~~i~~~~~ 120 (126)
T 1dbw_A 60 MSGVELLRNLGDLK-INIPSIVITGHG--DVPMAVEAMKAGAVDF-IEK---PFEDTVIIEAIERASE 120 (126)
T ss_dssp SCHHHHHHHHHHTT-CCCCEEEEECTT--CHHHHHHHHHTTCSEE-EES---SCCHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHhcC-CCCCEEEEECCC--CHHHHHHHHHhCHHHh-eeC---CCCHHHHHHHHHHHHH
Confidence 34566667777653 234566555333 2456777888899853 333 4667766666666554
No 256
>4hti_A Receptor-type tyrosine-protein phosphatase N2; phogrin, IA-2BETA, protein-tyrosine phosphatase, transmembra protein, diabetes, autoimmunity; 1.95A {Homo sapiens} PDB: 4htj_A
Probab=33.41 E-value=60 Score=22.97 Aligned_cols=41 Identities=12% Similarity=0.259 Sum_probs=28.6
Q ss_pred cCCCEEEEcccccCC-CcCcHHHHHHHHcCCCcccceeEEEEe
Q psy9408 77 ENPQLVILGKQSIDS-DNNQTGQMLAALLNWPQATFASKIVLK 118 (219)
Q Consensus 77 ~~~dlVl~G~~s~d~-~~~~v~~~lA~~Lg~p~vt~v~~l~~~ 118 (219)
..|-.|++++...+. +|.++--.||++|++|.-+ -+++.+.
T Consensus 9 eeygYIvt~~~~l~~~~G~~l~~~la~~l~l~~~~-F~~isV~ 50 (99)
T 4hti_A 9 EARGYIVTDRDPLRPEEGRRLVEDVARLLQVPSSA-FADVEVL 50 (99)
T ss_dssp -CCEEEEESCSSCCHHHHHHHHHHHHHHTTCCGGG-EEEEEEE
T ss_pred ceeEEEEECCCCCCHHHHHHHHHHHHHHhCCchhh-eeeeeec
Confidence 357788887764332 6788999999999999543 4445444
No 257
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=33.38 E-value=89 Score=21.29 Aligned_cols=64 Identities=20% Similarity=0.156 Sum_probs=38.2
Q ss_pred hHHHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHh
Q psy9408 7 DEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKK 76 (219)
Q Consensus 7 D~~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~ 76 (219)
+...++...+|++.......+++++-.. ..+...+++..|++..+. . .++.......|.++...
T Consensus 64 ~~~g~~~~~~l~~~~~~~~~ii~~s~~~--~~~~~~~~~~~g~~~~l~-K---P~~~~~l~~~i~~~~~~ 127 (136)
T 3hdv_A 64 PESGLDLIRTIRASERAALSIIVVSGDT--DVEEAVDVMHLGVVDFLL-K---PVDLGKLLELVNKELKI 127 (136)
T ss_dssp SSCHHHHHHHHHTSTTTTCEEEEEESSC--CHHHHHHHHHTTCSEEEE-S---SCCHHHHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHhcCCCCCCEEEEeCCC--ChHHHHHHHhCCcceEEe-C---CCCHHHHHHHHHHHhcC
Confidence 3445667777776411234555555332 356677888999886544 2 46777777777666543
No 258
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=33.25 E-value=1.7e+02 Score=22.73 Aligned_cols=71 Identities=17% Similarity=0.266 Sum_probs=42.9
Q ss_pred HHHHHHhhhhcCCCcEEEEEEe-cCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISC-GNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~-G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|.+|+++ |.+|+++.- .+...++..+++-..|.+ +..+..| -.|...+.+++.++.++. ++|+++.-.
T Consensus 18 ~~ia~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~D-~~~~~~~~~~~~~~~~~~g~id~lv~nA 90 (246)
T 2uvd_A 18 RAIAIDLAKQ---GANVVVNYAGNEQKANEVVDEIKKLGSD-AIAVRAD-VANAEDVTNMVKQTVDVFGQVDILVNNA 90 (246)
T ss_dssp HHHHHHHHHT---TCEEEEEESSCHHHHHHHHHHHHHTTCC-EEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEeCCCHHHHHHHHHHHHhcCCc-EEEEEcC-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 4567777775 468877654 222233334444445644 4444433 567888888888877775 589888644
No 259
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=33.00 E-value=60 Score=27.26 Aligned_cols=10 Identities=20% Similarity=0.032 Sum_probs=4.7
Q ss_pred hHHHHHHHHh
Q psy9408 204 NVIELIDKLK 213 (219)
Q Consensus 204 ~~~~l~~~L~ 213 (219)
.+.+-++.+.
T Consensus 343 ~~~~A~~~~~ 352 (364)
T 1gu7_A 343 PLHELYQDGV 352 (364)
T ss_dssp CHHHHHHHHH
T ss_pred hHHHHHHHHH
Confidence 4444455443
No 260
>3snr_A Extracellular ligand-binding receptor; structural genomics, APC102214, PSI-biology, midwest center structural genomics, MCSG; HET: MSE TYR PHE; 1.49A {Rhodopseudomonas palustris} PDB: 3uk0_A* 3t23_A* 3ukj_A* 4eyo_A* 4eyq_A* 3tx6_A* 4f8j_A* 4fb4_A*
Probab=32.95 E-value=93 Score=25.22 Aligned_cols=72 Identities=11% Similarity=0.033 Sum_probs=45.9
Q ss_pred HHHHHHhCCCCEE-----EEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcccceeE
Q psy9408 40 ILQIAMAMGVDRA-----ILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASK 114 (219)
Q Consensus 40 ~lr~~~a~GaD~v-----~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~~ 114 (219)
....++.+.++++ -++..|...++......+.+++.+.+.|.|+.+..+.. ..-...++...++|+++....
T Consensus 26 ~~~~g~~~a~~~i~g~~i~l~~~d~~~~~~~~~~~~~~l~~~~~v~~iig~~~s~~---~~~~~~~~~~~~ip~v~~~~~ 102 (362)
T 3snr_A 26 PERNALEFVVKEISGHPIKIIVLDDGGDPTAATTNARRFVTESKADVIMGSSVTPP---SVAISNVANEAQIPHIALAPL 102 (362)
T ss_dssp HHHHGGGGSCSEETTEEEEEEEEECTTCHHHHHHHHHHHHHTSCCSEEEECSSHHH---HHHHHHHHHHHTCCEEESSCC
T ss_pred HHHHHHHHHHHHhCCeEEEEEEecCCCCHHHHHHHHHHHHhccCceEEEcCCCcHH---HHHHHHHHHHcCccEEEecCC
Confidence 4566777777773 22222335788877788888888778999886554421 112335667789998875543
No 261
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=32.88 E-value=1.1e+02 Score=20.44 Aligned_cols=61 Identities=11% Similarity=0.181 Sum_probs=38.3
Q ss_pred hHHHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHH
Q psy9408 7 DEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVK 75 (219)
Q Consensus 7 D~~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik 75 (219)
+...++...++++.. ...++.++-... ......++..|++..+. . .++.......+.++++
T Consensus 58 ~~~g~~~~~~lr~~~--~~~ii~~t~~~~--~~~~~~~~~~ga~~~l~-K---P~~~~~l~~~i~~~l~ 118 (120)
T 3f6p_A 58 NKDGVEVCREVRKKY--DMPIIMLTAKDS--EIDKVIGLEIGADDYVT-K---PFSTRELLARVKANLR 118 (120)
T ss_dssp TTHHHHHHHHHHTTC--CSCEEEEEESSC--HHHHHHHHHTTCCEEEE-E---SCCHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHhcC--CCCEEEEECCCC--hHHHHHHHhCCcceeEc-C---CCCHHHHHHHHHHHHh
Confidence 456677777787653 356666664433 45567788999986433 3 3566666666665554
No 262
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=32.88 E-value=1.8e+02 Score=22.88 Aligned_cols=71 Identities=15% Similarity=0.173 Sum_probs=43.8
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|++|+++ |.+|+++.-.+...++..+++...|.+ +..+..| -.|...+..++.++.++. +.|+++.-.
T Consensus 21 ~~ia~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D-~~~~~~~~~~~~~~~~~~g~id~lv~nA 92 (262)
T 1zem_A 21 LATALRLAEE---GTAIALLDMNREALEKAEASVREKGVE-ARSYVCD-VTSEEAVIGTVDSVVRDFGKIDFLFNNA 92 (262)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHTTTSC-EEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhcCCc-EEEEEec-CCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence 4567777775 467776655443333444444445644 4444433 467888888888887776 589888744
No 263
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=32.85 E-value=40 Score=23.08 Aligned_cols=64 Identities=11% Similarity=-0.018 Sum_probs=39.9
Q ss_pred hHHHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc
Q psy9408 7 DEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE 77 (219)
Q Consensus 7 D~~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~ 77 (219)
+...++...++++.. +...++.++-. ...+....++..|++..+. . .+++.....+|..+++..
T Consensus 58 ~~~g~~~~~~l~~~~-~~~~ii~~s~~--~~~~~~~~~~~~g~~~~l~-k---p~~~~~l~~~i~~~~~~~ 121 (134)
T 3f6c_A 58 GVNGIQVLETLRKRQ-YSGIIIIVSAK--NDHFYGKHCADAGANGFVS-K---KEGMNNIIAAIEAAKNGY 121 (134)
T ss_dssp SSCHHHHHHHHHHTT-CCSEEEEEECC-----CTHHHHHHTTCSEEEE-G---GGCTHHHHHHHHHHHTTC
T ss_pred CCChHHHHHHHHhcC-CCCeEEEEeCC--CChHHHHHHHHhCCCEEEe-C---CCCHHHHHHHHHHHHCCC
Confidence 344667777788764 34566555533 2345678889999997443 3 356777778887777643
No 264
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=32.80 E-value=1.1e+02 Score=23.89 Aligned_cols=72 Identities=14% Similarity=0.168 Sum_probs=37.8
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCC------CEEEEEecCCCCCHHHHHHHHHHHHHhcC-C-CEE
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGV------DRAILIETDTILQSLSVAKLLQVIVKKEN-P-QLV 82 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~Ga------D~v~~v~~~~~~d~~~~A~~la~~ik~~~-~-dlV 82 (219)
.+.|.+|.++ |.+|+++.-.+...++..+++-..|. .++..+..| -.|...+..++.++.++.+ . |+|
T Consensus 21 ~~la~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D-~~~~~~~~~~~~~~~~~~g~i~d~v 96 (264)
T 2pd6_A 21 RAVSVRLAGE---GATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQAD-VSEARAARCLLEQVQACFSRPPSVV 96 (264)
T ss_dssp HHHHHHHHHT---TCEEEEEESSHHHHHHHHHTC------------CCEEEECC-TTSHHHHHHHHHHHHHHHSSCCSEE
T ss_pred HHHHHHHHHC---CCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEec-CCCHHHHHHHHHHHHHHhCCCCeEE
Confidence 3456677765 36777765443322233332222331 334444433 4577777777777776654 4 988
Q ss_pred EEcc
Q psy9408 83 ILGK 86 (219)
Q Consensus 83 l~G~ 86 (219)
+.-.
T Consensus 97 i~~A 100 (264)
T 2pd6_A 97 VSCA 100 (264)
T ss_dssp EECC
T ss_pred EECC
Confidence 8644
No 265
>2y1e_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase, DOXP/MEP pathway; 1.65A {Mycobacterium tuberculosis} PDB: 2jcv_A* 2jcz_A* 2jd2_A 2jd1_A 2y1d_A* 2y1c_A 2y1f_A* 2y1g_A* 3ras_A* 4a03_A* 4aic_A* 2jcx_A* 2jcy_A 2jd0_A* 2c82_A
Probab=32.80 E-value=2.6e+02 Score=24.66 Aligned_cols=91 Identities=10% Similarity=0.091 Sum_probs=54.5
Q ss_pred HHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCC--C--CCHHHHHHHHHHHHHhcCCCEEEE
Q psy9408 9 IAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDT--I--LQSLSVAKLLQVIVKKENPQLVIL 84 (219)
Q Consensus 9 ~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~--~--~d~~~~A~~la~~ik~~~~dlVl~ 84 (219)
++|+-.++-.++ .+|.+++.|+.+.+...+.+..+...-+.+.+... . .....=.+.+.+++...+.|+|+.
T Consensus 36 qtLdVi~~~pd~----f~V~aLaa~g~nv~~L~~q~~~f~p~~v~v~d~~~~~~~~~~v~~G~~~l~~~a~~~~~D~Vv~ 111 (398)
T 2y1e_A 36 QALQVIADNPDR----FEVVGLAAGGAHLDTLLRQRAQTGVTNIAVADEHAAQRVGDIPYHGSDAATRLVEQTEADVVLN 111 (398)
T ss_dssp HHHHHHHHCTTT----EEEEEEEECSSCHHHHHHHHHHHCCCCEEESCHHHHHHHCCCSEESTTHHHHHHHHSCCSEEEE
T ss_pred HHHHHHHhCCCc----eEEEEEEecCCCHHHHHHHHHHcCCCEEEEcCHHHhhhcCCEEEecHHHHHHHhcCCCCCEEEE
Confidence 345554444433 59999999667788888999999988666543110 0 000000234556666667999998
Q ss_pred cccccCCCcCcHHHHHHHHcCC
Q psy9408 85 GKQSIDSDNNQTGQMLAALLNW 106 (219)
Q Consensus 85 G~~s~d~~~~~v~~~lA~~Lg~ 106 (219)
+-.-. .|-.|-.-|-+.|-
T Consensus 112 AIvG~---aGL~PTlaAi~aGK 130 (398)
T 2y1e_A 112 ALVGA---LGLRPTLAALKTGA 130 (398)
T ss_dssp CCCSG---GGHHHHHHHHHHTC
T ss_pred eCcCH---HHHHHHHHHHHCCC
Confidence 87643 34444444556663
No 266
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=32.78 E-value=44 Score=29.91 Aligned_cols=69 Identities=9% Similarity=-0.019 Sum_probs=46.3
Q ss_pred hHHHHHHHHhCCCCEEEEEe--cCC-----------CCCHHH---HHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHH
Q psy9408 37 CKEILQIAMAMGVDRAILIE--TDT-----------ILQSLS---VAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQML 100 (219)
Q Consensus 37 ~~~~lr~~~a~GaD~v~~v~--~~~-----------~~d~~~---~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~l 100 (219)
.++.++.++..|+.+.-... ... ..+|.. .++.+++.++..++|+|+.... .+-.++..+
T Consensus 259 ~~~~~~~l~~~~a~~~g~F~L~SG~~S~~y~D~~~l~~~p~~~~~l~~~la~~~~~~~~D~Ivg~~~----gGi~~A~~l 334 (453)
T 3qw4_B 259 SVELAKALVDSHCVRFGNFTLKSGKSSPIYIDLRRLVTYPAIMRLVAREYAKVLRHYKFDRIAGLPY----AALPIASAI 334 (453)
T ss_dssp CHHHHHHHHHTTSEEESCCBCTTSSBCSEEECCGGGGGCHHHHHHHHHHHHHHHTTSCCSEEEECTT----TTHHHHHHH
T ss_pred HHHHHHHHHHCCCCEECCEeccCCCcCCEEEechHhccCHHHHHHHHHHHHHHhccCCCCEEEeccC----CcHHHHHHH
Confidence 46778888888886643222 111 124443 5566677776678998886654 345789999
Q ss_pred HHHcCCCcc
Q psy9408 101 AALLNWPQA 109 (219)
Q Consensus 101 A~~Lg~p~v 109 (219)
|..||.|++
T Consensus 335 A~~L~~p~~ 343 (453)
T 3qw4_B 335 SNEMNVPLI 343 (453)
T ss_dssp HHHHCCCEE
T ss_pred HHHhCCCEE
Confidence 999999975
No 267
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=32.76 E-value=1.8e+02 Score=22.97 Aligned_cols=72 Identities=6% Similarity=0.043 Sum_probs=42.0
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEccc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGKQ 87 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~~ 87 (219)
.+.|.+|.++ |.+|+++.-.+...++..+++...|. ++..+..| -.|...+..++.++.++. ++|+|+.-..
T Consensus 45 ~~la~~L~~~---G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D-l~~~~~v~~~~~~~~~~~g~iD~li~~Ag 117 (272)
T 1yb1_A 45 RLTAYEFAKL---KSKLVLWDINKHGLEETAAKCKGLGA-KVHTFVVD-CSNREDIYSSAKKVKAEIGDVSILVNNAG 117 (272)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECC-TTCHHHHHHHHHHHHHHTCCCSEEEECCC
T ss_pred HHHHHHHHHC---CCEEEEEEcCHHHHHHHHHHHHhcCC-eEEEEEee-CCCHHHHHHHHHHHHHHCCCCcEEEECCC
Confidence 3456667664 36777665544333344444445554 34444433 457777777777777665 5898886553
No 268
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=32.66 E-value=1.8e+02 Score=22.83 Aligned_cols=69 Identities=9% Similarity=0.092 Sum_probs=39.9
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEccc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGKQ 87 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~~ 87 (219)
.+.|++|+++ |.+|+.+.-.....++..++ .|. ++..+..| -.|.+.+.+++.++.++. ++|+++.-..
T Consensus 22 ~~ia~~l~~~---G~~V~~~~r~~~~~~~~~~~---~~~-~~~~~~~D-~~~~~~v~~~~~~~~~~~g~id~lv~~Ag 91 (259)
T 4e6p_A 22 RAFAEAYVRE---GATVAIADIDIERARQAAAE---IGP-AAYAVQMD-VTRQDSIDAAIAATVEHAGGLDILVNNAA 91 (259)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHH---HCT-TEEEEECC-TTCHHHHHHHHHHHHHHSSSCCEEEECCC
T ss_pred HHHHHHHHHC---CCEEEEEeCCHHHHHHHHHH---hCC-CceEEEee-CCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 3456677765 36776654433222222222 233 34444433 567888888888888776 5898887543
No 269
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=32.62 E-value=2.1e+02 Score=23.61 Aligned_cols=54 Identities=11% Similarity=0.041 Sum_probs=39.2
Q ss_pred hHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcccccC
Q psy9408 37 CKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGKQSID 90 (219)
Q Consensus 37 ~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~~s~d 90 (219)
+.+.++.+..+|+|.+.+.+.-....|..+.+.+..+.+.. +..+.+=++...+
T Consensus 161 ~~~~~~~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~G 215 (302)
T 2ftp_A 161 VAWVARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASEVPRERLAGHFHDTYG 215 (302)
T ss_dssp HHHHHHHHHHTTCSEEEEEESSSCCCHHHHHHHHHHHTTTSCGGGEEEEEBCTTS
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEeCCCcc
Confidence 45566777799999888876444568999999888887766 3467777765543
No 270
>3sg0_A Extracellular ligand-binding receptor; structural genomics, PSI-biology; HET: 173; 1.20A {Rhodopseudomonas palustris} PDB: 4dqd_A*
Probab=32.62 E-value=1e+02 Score=25.29 Aligned_cols=70 Identities=14% Similarity=0.006 Sum_probs=46.2
Q ss_pred HHHHHHhCCCCEE-----EEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcccce
Q psy9408 40 ILQIAMAMGVDRA-----ILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFA 112 (219)
Q Consensus 40 ~lr~~~a~GaD~v-----~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v 112 (219)
..+..+.+.++++ -++..|...++......+.+++.+.+.+.|+.+..+.. ..-...++...++|+++..
T Consensus 46 ~~~~g~~~a~~~i~G~~i~l~~~d~~~~~~~~~~~~~~l~~~~~v~~iig~~~s~~---~~~~~~~~~~~~ip~v~~~ 120 (386)
T 3sg0_A 46 PQSKTVAALPKEIGGEKVTYFALDDESDPTKAAQNARKLLSEEKVDVLIGSSLTPV---SLPLIDIAAEAKTPLMTMA 120 (386)
T ss_dssp HHHHHGGGSCSEETTEEEEEEEEECTTCHHHHHHHHHHHHHTSCCSEEECCSSHHH---HHHHHHHHHHTTCCEEECC
T ss_pred HHHHHHHHHHHHcCCEEEEEEEecCCCCHHHHHHHHHHHHhhcCceEEECCCCchh---HHHHHHHHHhcCCeEEEec
Confidence 4566777777774 22222336788888888888888778999986544421 1233456778899988754
No 271
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=32.42 E-value=1.9e+02 Score=22.92 Aligned_cols=72 Identities=17% Similarity=0.128 Sum_probs=41.3
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHH-HHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEccc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEIL-QIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGKQ 87 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~l-r~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~~ 87 (219)
.+.|++|+++ |.+|+++.-......+.+ ...-..|. ++..+..| -.|...+.+++.++.++. +.|+++.-..
T Consensus 43 ~~la~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D-~~~~~~v~~~~~~~~~~~g~id~li~nAg 116 (271)
T 4iin_A 43 AEIAKTLASM---GLKVWINYRSNAEVADALKNELEEKGY-KAAVIKFD-AASESDFIEAIQTIVQSDGGLSYLVNNAG 116 (271)
T ss_dssp HHHHHHHHHT---TCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECC-TTCHHHHHHHHHHHHHHHSSCCEEEECCC
T ss_pred HHHHHHHHHC---CCEEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECC-CCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 4566777765 367766554333222333 33334554 34444433 467777778887777765 5888886543
No 272
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=32.42 E-value=1.1e+02 Score=24.94 Aligned_cols=89 Identities=11% Similarity=0.076 Sum_probs=46.3
Q ss_pred HHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccc
Q psy9408 9 IAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQS 88 (219)
Q Consensus 9 ~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s 88 (219)
.+.-....|++.+ ++.+++.++- +...+.++. .-+.|+++.++..........-..+.+.+++.+||+++--..+
T Consensus 16 ~~~p~l~~Lk~~~-P~~~i~~l~~--~~~~~l~~~--~p~i~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~D~vid~~~~ 90 (348)
T 1psw_A 16 MSQSLYRTLQARY-PQAIIDVMAP--AWCRPLLSR--MPEVNEAIPMPLGHGALEIGERRKLGHSLREKRYDRAYVLPNS 90 (348)
T ss_dssp HHHHHHHHHHHHS-TTCEEEEEEC--GGGHHHHTT--CTTEEEEEEC-------CHHHHHHHHHHTTTTTCSEEEECSCC
T ss_pred HHHHHHHHHHHHC-CCCEEEEEEC--cchhHHHhc--CCccCEEEEecCCccccchHHHHHHHHHHHhcCCCEEEECCCC
Confidence 4555566778776 4678887763 233333221 1136788776532111111122345556667789999843321
Q ss_pred cCCCcCcHHHHHHHHcCCCc
Q psy9408 89 IDSDNNQTGQMLAALLNWPQ 108 (219)
Q Consensus 89 ~d~~~~~v~~~lA~~Lg~p~ 108 (219)
.-...++...|+|.
T Consensus 91 ------~~sa~~~~~~~~~~ 104 (348)
T 1psw_A 91 ------FKSALVPLFAGIPH 104 (348)
T ss_dssp ------SGGGHHHHHTTCSE
T ss_pred ------hHHHHHHHHhCCCE
Confidence 23456677778774
No 273
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=32.16 E-value=1.5e+02 Score=25.01 Aligned_cols=49 Identities=14% Similarity=-0.005 Sum_probs=29.7
Q ss_pred CCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCC
Q psy9408 49 VDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWP 107 (219)
Q Consensus 49 aD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p 107 (219)
+|+.+.++ ..|. ..|.+++++.++|.|+.+.. +.. -.....+++.+|+|
T Consensus 49 ad~~~~~~---~~d~----~~l~~~~~~~~~d~v~~~~~--~~~-~~~~a~~~~~~gl~ 97 (403)
T 4dim_A 49 ADEISYMD---ISNP----DEVEQKVKDLNLDGAATCCL--DTG-IVSLARICDKENLV 97 (403)
T ss_dssp CSEEEECC---TTCH----HHHHHHTTTSCCSEEECCSC--STT-HHHHHHHHHHHTCS
T ss_pred CCeEEEec---CCCH----HHHHHHHHHcCCCEEEeCCc--chh-HHHHHHHHHHcCcC
Confidence 56666554 1233 56667788889999998522 111 22455677777765
No 274
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=32.10 E-value=1.8e+02 Score=22.63 Aligned_cols=71 Identities=18% Similarity=0.284 Sum_probs=44.5
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCc-chHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNK-KCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~-~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|++|+++ |.+|+.+.-... ..++..+++...|.+ +..+..| -.|...+.+.+.++.++. ++|+++.-.
T Consensus 18 ~~ia~~l~~~---G~~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D-v~d~~~v~~~~~~~~~~~g~id~lv~nA 90 (246)
T 3osu_A 18 RSIALQLAEE---GYNVAVNYAGSKEKAEAVVEEIKAKGVD-SFAIQAN-VADADEVKAMIKEVVSQFGSLDVLVNNA 90 (246)
T ss_dssp HHHHHHHHHT---TCEEEEEESSCHHHHHHHHHHHHHTTSC-EEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEeCCCHHHHHHHHHHHHhcCCc-EEEEEcc-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 3557778775 468776554332 234444555566665 4444433 567888888888887776 589888654
No 275
>3chv_A Prokaryotic domain of unknown function (DUF849) W barrel fold; TIM barrel fold, structural genomics, joint center for struc genomics; HET: MSE; 1.45A {Silicibacter pomeroyi dss-3} PDB: 3fa5_A
Probab=32.09 E-value=52 Score=27.65 Aligned_cols=51 Identities=18% Similarity=0.134 Sum_probs=37.0
Q ss_pred chHHHHHHHHhCCCCEEE-EEecCC---CCCHHHHHHHHHHHHHhcCCCEEEEccc
Q psy9408 36 KCKEILQIAMAMGVDRAI-LIETDT---ILQSLSVAKLLQVIVKKENPQLVILGKQ 87 (219)
Q Consensus 36 ~~~~~lr~~~a~GaD~v~-~v~~~~---~~d~~~~A~~la~~ik~~~~dlVl~G~~ 87 (219)
+..+...+|...||.-+. |+-|+. ..|++.|.+++. .|++..||+|+--.|
T Consensus 35 Eia~~A~~~~~AGAaivHlH~Rd~~G~ps~d~~~~~e~~~-~IR~~~pd~ii~~TT 89 (284)
T 3chv_A 35 EQVESTQEAFEAGAAIAHCHVRNDDGTPSSDPDRFARLTE-GLHTHCPGMIVQFST 89 (284)
T ss_dssp HHHHHHHHHHHHTCCEEEECEECTTSCEECCHHHHHHHHH-HHHHHSTTCEEEECC
T ss_pred HHHHHHHHHHHcCCcEEEeeecCCCCCcCCCHHHHHHHHH-HHHHhCCCeEEEeCC
Confidence 344567788889999765 455543 469999999995 567668899986555
No 276
>1dz3_A Stage 0 sporulation protein A; response regulator, domain swapping; 1.65A {Bacillus stearothermophilus} SCOP: c.23.1.1 PDB: 1qmp_A*
Probab=31.93 E-value=1.2e+02 Score=20.47 Aligned_cols=63 Identities=13% Similarity=0.203 Sum_probs=33.3
Q ss_pred HHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc
Q psy9408 9 IAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE 77 (219)
Q Consensus 9 ~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~ 77 (219)
..++...+|++.......|+.++--. ..+....++..|++..+ .. .++.......|.++.++.
T Consensus 62 ~g~~~~~~l~~~~~~~~~ii~ls~~~--~~~~~~~~~~~ga~~~l-~K---P~~~~~l~~~i~~~~~~~ 124 (130)
T 1dz3_A 62 DGLAVLERIRAGFEHQPNVIMLTAFG--QEDVTKKAVELGASYFI-LK---PFDMENLAHHIRQVYGKT 124 (130)
T ss_dssp CHHHHHHHHHHHCSSCCEEEEEEETT--CHHHHHHHHHTTCEEEE-EC---SSCCTTHHHHHHHHHHCC
T ss_pred CHHHHHHHHHhcCCCCCcEEEEecCC--CHHHHHHHHHcCCCEEE-eC---CCCHHHHHHHHHHHhcCC
Confidence 34555666665321123455544332 24556778888887643 33 244445556666665543
No 277
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=31.93 E-value=86 Score=26.56 Aligned_cols=11 Identities=18% Similarity=0.428 Sum_probs=5.9
Q ss_pred HHHhCCCCEEE
Q psy9408 43 IAMAMGVDRAI 53 (219)
Q Consensus 43 ~~~a~GaD~v~ 53 (219)
.+..+|+|.++
T Consensus 203 ~~~~lGa~~vi 213 (371)
T 3gqv_A 203 LAKSRGAEEVF 213 (371)
T ss_dssp HHHHTTCSEEE
T ss_pred HHHHcCCcEEE
Confidence 34455666654
No 278
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=31.86 E-value=1.8e+02 Score=22.54 Aligned_cols=71 Identities=13% Similarity=0.164 Sum_probs=41.9
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|.+|.++ |.+|+++.-.+...++..+++...|.+ +..+..| -.|...+..++.++.++. ++|+|+.-.
T Consensus 27 ~~la~~l~~~---G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D-~~~~~~~~~~~~~~~~~~~~id~vi~~A 98 (260)
T 3awd_A 27 LACVTALAEA---GARVIIADLDEAMATKAVEDLRMEGHD-VSSVVMD-VTNTESVQNAVRSVHEQEGRVDILVACA 98 (260)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCC-EEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhcCCc-eEEEEec-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 3456677765 367776655433333344444445543 4444433 457777777777777665 689888644
No 279
>3vmm_A Alanine-anticapsin ligase BACD; ATP-grAsp domain, amino acid ligase, ATP binding; HET: ADP P0D; 2.50A {Bacillus subtilis}
Probab=31.85 E-value=45 Score=29.80 Aligned_cols=55 Identities=7% Similarity=-0.058 Sum_probs=37.9
Q ss_pred CCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCC
Q psy9408 49 VDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWP 107 (219)
Q Consensus 49 aD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p 107 (219)
+|+.|++..+...+.+.+...|.+++++.++|.|+.+... .-....++++.+|+|
T Consensus 73 Ad~~~~~~~~~~~~~~~~i~~I~~~a~~~~id~Vip~sE~----~l~~~a~~~e~~Gi~ 127 (474)
T 3vmm_A 73 PDSIYWAHEDHNKPEEEVVEQIVKVAEMFGADAITTNNEL----FIAPMAKACERLGLR 127 (474)
T ss_dssp CSCCSSCCSCCCCCHHHHHHHHHHHHHHTTCSEEEESCGG----GHHHHHHHHHHTTCC
T ss_pred cCeEEEecCCCCCchHHHHHHHHHHHHHcCCCEEEECCcc----cHHHHHHHHHHcCCC
Confidence 7777776533344667888899999999999999985432 113455666667766
No 280
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=31.83 E-value=67 Score=27.05 Aligned_cols=13 Identities=8% Similarity=0.570 Sum_probs=8.1
Q ss_pred echHHHHHHHHhh
Q psy9408 202 VKNVIELIDKLKN 214 (219)
Q Consensus 202 ~~~~~~l~~~L~~ 214 (219)
++.+.+-++.+++
T Consensus 336 l~~~~~A~~~~~~ 348 (359)
T 1h2b_A 336 LDEINDVLERLEK 348 (359)
T ss_dssp GGGHHHHHHHHHT
T ss_pred HHHHHHHHHHHHc
Confidence 4566666777654
No 281
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=31.67 E-value=1.9e+02 Score=22.85 Aligned_cols=72 Identities=18% Similarity=0.245 Sum_probs=41.9
Q ss_pred HHHHHHhhhhcCCCcEEEEEEec------------CcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-
Q psy9408 11 IESAIRLRESSNKIKEIIAISCG------------NKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE- 77 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G------------~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~- 77 (219)
.+.|++|+++ |.+|+++... ....++..+..-..|. ++..+..| -.|...+.+++.++.++.
T Consensus 27 ~~ia~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D-~~~~~~v~~~~~~~~~~~g 101 (278)
T 3sx2_A 27 RAHAVRLAAD---GADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGS-RIVARQAD-VRDRESLSAALQAGLDELG 101 (278)
T ss_dssp HHHHHHHHHT---TCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTC-CEEEEECC-TTCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHC---CCeEEEEecccccccccccccchHHHHHHHHHHHhcCC-eEEEEeCC-CCCHHHHHHHHHHHHHHcC
Confidence 3456677765 4677665543 1222333334444454 34444433 567888888888887775
Q ss_pred CCCEEEEccc
Q psy9408 78 NPQLVILGKQ 87 (219)
Q Consensus 78 ~~dlVl~G~~ 87 (219)
..|+++.-..
T Consensus 102 ~id~lv~nAg 111 (278)
T 3sx2_A 102 RLDIVVANAG 111 (278)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 5898886553
No 282
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=31.62 E-value=47 Score=27.82 Aligned_cols=48 Identities=10% Similarity=0.031 Sum_probs=25.2
Q ss_pred CcEEEEEEecCcch-HHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEE
Q psy9408 24 IKEIIAISCGNKKC-KEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVI 83 (219)
Q Consensus 24 g~~V~av~~G~~~~-~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl 83 (219)
|.+|.. +|.... .-.++-|..+|+ +++.++... .-. +.+++.+.|.++
T Consensus 177 g~~VlV--~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~--~~~-------~~~~~lGa~~v~ 225 (348)
T 3two_A 177 GTKVGV--AGFGGLGSMAVKYAVAMGA-EVSVFARNE--HKK-------QDALSMGVKHFY 225 (348)
T ss_dssp TCEEEE--ESCSHHHHHHHHHHHHTTC-EEEEECSSS--TTH-------HHHHHTTCSEEE
T ss_pred CCEEEE--ECCcHHHHHHHHHHHHCCC-eEEEEeCCH--HHH-------HHHHhcCCCeec
Confidence 445443 354322 234566677898 777765321 111 133556777777
No 283
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=31.57 E-value=1.9e+02 Score=22.67 Aligned_cols=71 Identities=10% Similarity=0.128 Sum_probs=44.6
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcc--hHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKK--CKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~--~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|++|+++ |.+|+++.-.+.. .++..+++-..|. ++..+..| -.|...+.+++.++.++. ++|+++.-.
T Consensus 16 ~~ia~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~D-v~~~~~v~~~~~~~~~~~g~iD~lv~nA 89 (258)
T 3a28_C 16 RGISEKLAAD---GFDIAVADLPQQEEQAAETIKLIEAADQ-KAVFVGLD-VTDKANFDSAIDEAAEKLGGFDVLVNNA 89 (258)
T ss_dssp HHHHHHHHHH---TCEEEEEECGGGHHHHHHHHHHHHTTTC-CEEEEECC-TTCHHHHHHHHHHHHHHHTCCCEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEeCCcchHHHHHHHHHHHhcCC-cEEEEEcc-CCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence 4567778776 4688777655443 3344444444454 45555533 467788888888887776 589888654
No 284
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=31.47 E-value=48 Score=23.73 Aligned_cols=61 Identities=16% Similarity=0.161 Sum_probs=37.0
Q ss_pred hHHHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHH
Q psy9408 7 DEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIV 74 (219)
Q Consensus 7 D~~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~i 74 (219)
|...++...+|++.. ....|++++--. ..+....++..|++..+. . .++.......|..++
T Consensus 95 ~~~g~~~~~~lr~~~-~~~~ii~ls~~~--~~~~~~~~~~~g~~~~l~-K---P~~~~~l~~~i~~~l 155 (157)
T 3hzh_A 95 KMDGITCLSNIMEFD-KNARVIMISALG--KEQLVKDCLIKGAKTFIV-K---PLDRAKVLQRVMSVF 155 (157)
T ss_dssp SSCHHHHHHHHHHHC-TTCCEEEEESCC--CHHHHHHHHHTTCSEEEE-S---SCCHHHHHHHHHHTT
T ss_pred CccHHHHHHHHHhhC-CCCcEEEEeccC--cHHHHHHHHHcCCCEEEe-C---CCCHHHHHHHHHHHh
Confidence 345667777777764 345565555332 356678888999987543 2 456666666555443
No 285
>1k92_A Argininosuccinate synthase, argininosuccinate SY; N-type ATP pyrophosphatase, ligase; 1.60A {Escherichia coli} SCOP: c.26.2.1 d.210.1.1 PDB: 1k97_A* 1kp2_A* 1kp3_A*
Probab=31.38 E-value=2.7e+02 Score=24.85 Aligned_cols=65 Identities=17% Similarity=0.143 Sum_probs=44.1
Q ss_pred CcEEEEEEecCc-----chHHHHHHHHhCCCCEEEEEecCC--------------CC---------CHHH-----HHHHH
Q psy9408 24 IKEIIAISCGNK-----KCKEILQIAMAMGVDRAILIETDT--------------IL---------QSLS-----VAKLL 70 (219)
Q Consensus 24 g~~V~av~~G~~-----~~~~~lr~~~a~GaD~v~~v~~~~--------------~~---------d~~~-----~A~~l 70 (219)
|.+|+++++--. +.+.+-+.|..+|+.+.++++-.. .+ .... ....+
T Consensus 34 G~eViavtvd~Gq~~~~ele~a~~~A~~lGi~~~~vvD~~eef~~~v~p~i~~na~y~~eg~rcY~l~t~~aRp~i~~~l 113 (455)
T 1k92_A 34 GAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLIDCRKQLVAEGIAAIQCGAFHNTTGGLTYFNTTPLGRAVTGTML 113 (455)
T ss_dssp TCEEEEEEEECCCTTCSCTTHHHHHHHHHTCSEEEEEECHHHHHHHHHHHHHHTCCCCEETTEECCCHHHHHHHHHHHHH
T ss_pred CCEEEEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEeChHHHHHHhHHHHHcCCcccccCceecccCCcchHHHHHHHH
Confidence 379999888322 345566778899997777766311 01 1111 34667
Q ss_pred HHHHHhcCCCEEEEcccc
Q psy9408 71 QVIVKKENPQLVILGKQS 88 (219)
Q Consensus 71 a~~ik~~~~dlVl~G~~s 88 (219)
.+++++.++|.|..|++.
T Consensus 114 ~e~A~e~Gad~IAtGht~ 131 (455)
T 1k92_A 114 VAAMKEDGVNIWGDGSTY 131 (455)
T ss_dssp HHHHHHTTCCEEECCCCT
T ss_pred HHHHHHcCCCEEEECCcC
Confidence 888888999999999974
No 286
>3saj_A Glutamate receptor 1; rossman fold, ION channel, membrane, transport protein; HET: NAG BMA MAN; 2.50A {Rattus norvegicus}
Probab=31.22 E-value=58 Score=27.34 Aligned_cols=71 Identities=8% Similarity=-0.053 Sum_probs=44.7
Q ss_pred hHHHHHHHHh-CCCC-EEEEE-ecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcccc
Q psy9408 37 CKEILQIAMA-MGVD-RAILI-ETDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATF 111 (219)
Q Consensus 37 ~~~~lr~~~a-~GaD-~v~~v-~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~ 111 (219)
....++-|+. ..++ ++-++ .|+...|+...+.+..+++++ +.+.|+-+.+|. .......++...++|+++.
T Consensus 24 ~~~a~~lAv~~iN~~g~l~~~~~D~~~~d~~~a~~~~~~l~~~-~V~aiiG~~~S~---~~~a~~~~~~~~~iP~is~ 97 (384)
T 3saj_A 24 EHAAFRFALSQLTEPPKLLPQIDIVNISDSFEMTYRFCSQFSK-GVYAIFGFYERR---TVNMLTSFCGALHVCFITP 97 (384)
T ss_dssp HHHHHHHHHTTCCSSSEEEEEEEECCTTCHHHHHHHHHHHHHT-TCSCEEECCCHH---HHHHHHHHHHHHTCCEEEC
T ss_pred HHHHHHHHHHHHhcCCccceeeEecccCchhhHHHHHHHHHhc-CeEEEECCCCHH---HHHHHHHHhccCCCCeEec
Confidence 4455555553 2222 54443 443334888888888888865 788777665542 2344566888999999976
No 287
>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} SCOP: c.61.1.1 PDB: 1g2p_A
Probab=31.19 E-value=55 Score=25.06 Aligned_cols=42 Identities=12% Similarity=0.041 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHh----cCCCEEEEcccccCCCcCcHHHHHHHHcCCCcc
Q psy9408 64 LSVAKLLQVIVKK----ENPQLVILGKQSIDSDNNQTGQMLAALLNWPQA 109 (219)
Q Consensus 64 ~~~A~~la~~ik~----~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~v 109 (219)
...++.|++.+++ .++|+|+.-. ..+-.++..+|..||+|++
T Consensus 41 ~~~~~~La~~i~~~~~~~~~d~Iv~v~----~~G~~~a~~la~~l~~p~~ 86 (187)
T 1g2q_A 41 QKLIDAFKLHLEEAFPEVKIDYIVGLE----SRGFLFGPTLALALGVGFV 86 (187)
T ss_dssp HHHHHHHHHHHHHHCTTSCCCEEEEET----TTHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHhhhcccCCCCEEEEEc----cCcHHHHHHHHHHHCCCEE
Confidence 3556677777765 4688877542 2345799999999999976
No 288
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=31.18 E-value=2e+02 Score=22.84 Aligned_cols=72 Identities=15% Similarity=0.155 Sum_probs=42.4
Q ss_pred HHHHHHhhhhcCCCcEEEEEEec-------------CcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCG-------------NKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE 77 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G-------------~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~ 77 (219)
.+.|++|+++ |.+|+++... ....++..+..-..|. ++..+..| -.|...+.+.+.++.++.
T Consensus 25 ~a~a~~la~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D-~~~~~~v~~~~~~~~~~~ 99 (277)
T 3tsc_A 25 RAHAVRMAAE---GADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANR-RIVAAVVD-TRDFDRLRKVVDDGVAAL 99 (277)
T ss_dssp HHHHHHHHHT---TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECC-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHc---CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCC-eEEEEECC-CCCHHHHHHHHHHHHHHc
Confidence 4566777765 4677766541 1222333444444554 34444433 567788888888887775
Q ss_pred -CCCEEEEccc
Q psy9408 78 -NPQLVILGKQ 87 (219)
Q Consensus 78 -~~dlVl~G~~ 87 (219)
..|+++.-..
T Consensus 100 g~id~lvnnAg 110 (277)
T 3tsc_A 100 GRLDIIVANAG 110 (277)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 4898886543
No 289
>3vdp_A Recombination protein RECR; zinc finger, DNA repair, DNA binding; 2.45A {Thermoanaerobacter tengcongensis} PDB: 3vdu_A 3ve5_D
Probab=31.04 E-value=48 Score=26.78 Aligned_cols=69 Identities=19% Similarity=0.252 Sum_probs=47.3
Q ss_pred CCHhhHHHHHHHHHhhhhcCCCcEEEEEE--------ecCcc--hHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHH
Q psy9408 3 INPFDEIAIESAIRLRESSNKIKEIIAIS--------CGNKK--CKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQV 72 (219)
Q Consensus 3 iNp~D~~Ale~A~~l~e~~g~g~~V~av~--------~G~~~--~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~ 72 (219)
=||-|..|+|.+...+- .-.++- +||++ .++.++.+..-++.++|+..++ ..+.++||.-|++
T Consensus 100 E~~~Dv~aiE~t~~y~G------~YhVLgG~iSPldGigP~~L~i~~L~~Ri~~~~v~EVIlAtnp-TvEGeaTa~Yi~~ 172 (212)
T 3vdp_A 100 SHPMDVVAMEKVKEYKG------VYHVLHGVISPIEGVGPEDIRIKELLERVRDGSVKEVILATNP-DIEGEATAMYIAK 172 (212)
T ss_dssp SSHHHHHHHHTTSCCCE------EEEECSSCCBTTTTBCGGGTTHHHHHHHHHHSCCSEEEECCCS-SHHHHHHHHHHHH
T ss_pred CCHHHHHHHHhhCccce------EEEecCCccCccCCCCccccCHHHHHHHHhcCCCcEEEEECCC-CccHHHHHHHHHH
Confidence 47899999988644432 222221 24443 4566666667789999998743 5678899999999
Q ss_pred HHHhcC
Q psy9408 73 IVKKEN 78 (219)
Q Consensus 73 ~ik~~~ 78 (219)
.++..+
T Consensus 173 ~Lk~~~ 178 (212)
T 3vdp_A 173 LLKPFG 178 (212)
T ss_dssp HHTTTT
T ss_pred HhhhcC
Confidence 998654
No 290
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=31.02 E-value=1.3e+02 Score=20.60 Aligned_cols=64 Identities=16% Similarity=0.155 Sum_probs=42.1
Q ss_pred hHHHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc
Q psy9408 7 DEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE 77 (219)
Q Consensus 7 D~~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~ 77 (219)
+...++...++++.. ....+++++-.. ..+....++..|++..+. . .++.......|..+++..
T Consensus 59 ~~~g~~~~~~l~~~~-~~~pii~ls~~~--~~~~~~~~~~~g~~~~l~-k---P~~~~~l~~~i~~~~~~~ 122 (142)
T 2qxy_A 59 GEESLNLIRRIREEF-PDTKVAVLSAYV--DKDLIINSVKAGAVDYIL-K---PFRLDYLLERVKKIISST 122 (142)
T ss_dssp THHHHHHHHHHHHHC-TTCEEEEEESCC--CHHHHHHHHHHTCSCEEE-S---SCCHHHHHHHHHHHHHC-
T ss_pred CCcHHHHHHHHHHHC-CCCCEEEEECCC--CHHHHHHHHHCCcceeEe-C---CCCHHHHHHHHHHHHhhc
Confidence 455677777887764 345666555332 356678889999997443 2 467888888888887653
No 291
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=30.93 E-value=3.5e+02 Score=25.65 Aligned_cols=64 Identities=13% Similarity=0.154 Sum_probs=42.7
Q ss_pred hHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcccccCCCcCcHHHHHHHH
Q psy9408 37 CKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGKQSIDSDNNQTGQMLAAL 103 (219)
Q Consensus 37 ~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~~s~d~~~~~v~~~lA~~ 103 (219)
..+.++.+..+|+|.+.+.+.-....|..+...+..+.++. +..+=+-.+.. .+-.++-.+|+.
T Consensus 263 ~~~~a~~l~~~Ga~~I~l~DT~G~~~P~~v~~lV~~lk~~~p~~~I~~H~Hnd---~GlAvANslaAv 327 (718)
T 3bg3_A 263 YMGLAEELVRAGTHILCIKDMAGLLKPTACTMLVSSLRDRFPDLPLHIHTHDT---SGAGVAAMLACA 327 (718)
T ss_dssp HHHHHHHHHHHTCSEEEEECTTSCCCHHHHHHHHHHHHHHSTTCCEEEECCCT---TSCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEcCcCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCC---ccHHHHHHHHHH
Confidence 34567888899999877766444678999999888887776 33333333333 345566666554
No 292
>1p5d_X PMM, phosphomannomutase; alpha/beta protein, phosphohexomutase, phosphoserine, enzyme complex, enzyme-metal complex, isomerase; HET: SEP G1P; 1.60A {Pseudomonas aeruginosa} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1k35_A* 1p5g_X* 1pcj_X* 1pcm_X* 1k2y_X* 2h5a_X* 2h4l_X* 2fkf_A* 3rsm_A 3bkq_X* 3c04_A* 2fkm_X*
Probab=30.89 E-value=1.7e+02 Score=25.72 Aligned_cols=45 Identities=13% Similarity=0.032 Sum_probs=31.6
Q ss_pred CCHHHHHHHHHHHHHhcCCC-EEEEcccccCCCcCcHHHHHHHHcCCCccc
Q psy9408 61 LQSLSVAKLLQVIVKKENPQ-LVILGKQSIDSDNNQTGQMLAALLNWPQAT 110 (219)
Q Consensus 61 ~d~~~~A~~la~~ik~~~~d-lVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt 110 (219)
.+.+.+...++..+.+..+. .|+..-.+ .+..-.+++.+|.+++.
T Consensus 258 l~gd~i~~L~a~~l~~~~~~~~vv~~v~s-----s~~l~~~~~~~g~~~~~ 303 (463)
T 1p5d_X 258 IYPDRLLMLFAKDVVSRNPGADIIFDVKC-----TRRLIALISGYGGRPVM 303 (463)
T ss_dssp ECHHHHHHHHHHHHHHHSTTCEEEEETTS-----CTHHHHHHHHTTCEEEE
T ss_pred eCHHHHHHHHHHHHHHhCCCCeEEEEecC-----cHHHHHHHHHcCCEEEE
Confidence 58999999999988765443 55544443 34667888899987653
No 293
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=30.89 E-value=27 Score=31.39 Aligned_cols=52 Identities=10% Similarity=-0.042 Sum_probs=30.5
Q ss_pred HHHHHHHHh-CCCCEEEEEecCCCC-CHH-----HHHHHHHHHHHhcCCCEEEEccccc
Q psy9408 38 KEILQIAMA-MGVDRAILIETDTIL-QSL-----SVAKLLQVIVKKENPQLVILGKQSI 89 (219)
Q Consensus 38 ~~~lr~~~a-~GaD~v~~v~~~~~~-d~~-----~~A~~la~~ik~~~~dlVl~G~~s~ 89 (219)
++.++++-+ -|+|-+|++.+.... +.. .....|++.+...++|+||+|++-.
T Consensus 172 ~~~v~~l~~~~~~d~iI~l~H~g~~~~~~~~~~~~~~~~la~~~~~~~iDlilgGHtH~ 230 (516)
T 1hp1_A 172 KLVIQELQQTEKPDIIIAATHMGHYDNGEHGSNAPGDVEMARALPAGSLAMIVGGHSQD 230 (516)
T ss_dssp HHHHHHHHHHTCCSEEEEEEESCCCGGGCCTTSCCCHHHHHHHSCTTSSSEEECCSSCC
T ss_pred HHHHHHHHhcCCCCEEEEEecCCccCCCcccccCchHHHHHHhCCCCceeEEECCCCCc
Confidence 344555544 389999999864321 100 1123455544434599999999753
No 294
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=30.88 E-value=50 Score=27.55 Aligned_cols=16 Identities=19% Similarity=0.360 Sum_probs=8.5
Q ss_pred HHHHHHhCCCCEEEEEe
Q psy9408 40 ILQIAMAMGVDRAILIE 56 (219)
Q Consensus 40 ~lr~~~a~GaD~v~~v~ 56 (219)
.++-+..+|+ +++.++
T Consensus 161 ~~~~a~~~Ga-~Vi~~~ 176 (340)
T 3gms_A 161 FAQLSQILNF-RLIAVT 176 (340)
T ss_dssp HHHHHHHHTC-EEEEEE
T ss_pred HHHHHHHcCC-EEEEEe
Confidence 3444555666 555554
No 295
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=30.73 E-value=2e+02 Score=22.76 Aligned_cols=71 Identities=21% Similarity=0.280 Sum_probs=42.3
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcc-hHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKK-CKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~-~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|++|+++ |.+|+++..-... .++..+++...|.+ +..+..| -.|...+.+.+.++.++. .+|+++.-.
T Consensus 32 ~aia~~l~~~---G~~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D-v~~~~~v~~~~~~~~~~~g~id~lvnnA 104 (270)
T 3is3_A 32 AAVAVHLGRL---GAKVVVNYANSTKDAEKVVSEIKALGSD-AIAIKAD-IRQVPEIVKLFDQAVAHFGHLDIAVSNS 104 (270)
T ss_dssp HHHHHHHHHT---TCEEEEEESSCHHHHHHHHHHHHHTTCC-EEEEECC-TTSHHHHHHHHHHHHHHHSCCCEEECCC
T ss_pred HHHHHHHHHC---CCEEEEEcCCCHHHHHHHHHHHHhcCCc-EEEEEcC-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 3456777765 4677655433322 33444555556654 3344423 567888888888887776 579888543
No 296
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=30.60 E-value=83 Score=25.86 Aligned_cols=52 Identities=21% Similarity=0.042 Sum_probs=35.8
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCccccee
Q psy9408 59 TILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFAS 113 (219)
Q Consensus 59 ~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~ 113 (219)
...++......+.+++.+.+.+.|+.+..+. ...-...++...++|+++...
T Consensus 62 ~~~~~~~~~~~~~~l~~~~~v~~iiG~~~s~---~~~~~~~~~~~~~iP~i~~~~ 113 (366)
T 3td9_A 62 TRSEKTEAANAAARAIDKEKVLAIIGEVASA---HSLAIAPIAEENKVPMVTPAS 113 (366)
T ss_dssp CTTCHHHHHHHHHHHHHTSCCSEEEECSSHH---HHHHHHHHHHHTTCCEEESSC
T ss_pred CCCCHHHHHHHHHHHhccCCeEEEEccCCch---hHHHHHHHHHhCCCeEEecCC
Confidence 3578887788888888877799888655442 122344567788999887543
No 297
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=30.58 E-value=81 Score=27.50 Aligned_cols=70 Identities=17% Similarity=0.051 Sum_probs=37.9
Q ss_pred HHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCC-CCCHHHHHHHHHHHHHhcCCCEEEEcc
Q psy9408 9 IAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDT-ILQSLSVAKLLQVIVKKENPQLVILGK 86 (219)
Q Consensus 9 ~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~-~~d~~~~A~~la~~ik~~~~dlVl~G~ 86 (219)
.++..++.+++. |.+++++...+....... .-+|+.+.+..+. ..+.+.-...|.+++++.++|+|+.|.
T Consensus 17 ~~~~i~~a~~~~---G~~vv~v~~~~~~~~~~~-----~~ad~~~~i~~~~~~~~~y~d~~~l~~~~~~~~id~v~~~~ 87 (461)
T 2dzd_A 17 IAIRVFRACTEL---GIRTVAIYSKEDVGSYHR-----YKADEAYLVGEGKKPIEAYLDIEGIIEIAKAHDVDAIHPGY 87 (461)
T ss_dssp HHHHHHHHHHHH---TCEEEEEECGGGTTCTHH-----HHSSSEEECSTTSCTTGGGTCHHHHHHHHHHTTCCEEECCS
T ss_pred HHHHHHHHHHHc---CCEEEEEECCcccccchh-----hhCCEEEEcCCCCCccccccCHHHHHHHHHHhCCCEEEECC
Confidence 456666666653 467777754432100011 1267777765321 111111135567778888999999875
No 298
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=30.57 E-value=2e+02 Score=22.77 Aligned_cols=71 Identities=21% Similarity=0.191 Sum_probs=41.3
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHH-HhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIA-MAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~-~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|++|+++ |.+|+++.-.+...++..+++ -..|.. +..+..| -.|.+.+.+++.++.++. +.|+++.-.
T Consensus 35 ~~ia~~l~~~---G~~V~~~~r~~~~~~~~~~~l~~~~~~~-~~~~~~D-l~~~~~v~~~~~~~~~~~g~iD~lvnnA 107 (267)
T 1vl8_A 35 FGIAQGLAEA---GCSVVVASRNLEEASEAAQKLTEKYGVE-TMAFRCD-VSNYEEVKKLLEAVKEKFGKLDTVVNAA 107 (267)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHHCCC-EEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHHhcCCe-EEEEEcC-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 3556677765 467776654433333333333 233543 4444433 467778888888777765 589888644
No 299
>3gmi_A UPF0348 protein MJ0951; protein with unknown function, structural genomics, PSI, MCS protein structure initiative; 1.91A {Methanocaldococcus jannaschii}
Probab=30.43 E-value=72 Score=27.70 Aligned_cols=65 Identities=12% Similarity=0.032 Sum_probs=42.5
Q ss_pred HHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCC
Q psy9408 38 KEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWP 107 (219)
Q Consensus 38 ~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p 107 (219)
.+-.+.+..+|+|-++.+.-.....+...++-...++.+.+++.|++|. ..+ .. --.+|..+.-+
T Consensus 103 ~~R~~~~~~~GvD~vielpF~~~~s~~~Fv~~~v~ll~~l~~~~iv~G~-~~~---~~-~~~~~~~i~~~ 167 (357)
T 3gmi_A 103 YIRAEMAIRAGADIVVEGPPMGIMGSGQYMRCLIKMFYSLGAEIIPRGY-IPE---KT-MEKVIDCINKG 167 (357)
T ss_dssp HHHHHHHHHHTCSEEEECCCGGGSCHHHHHHHHHHHHHHHTCCEEEEEE-CCC---HH-HHHHHHHHHTT
T ss_pred HHHHHHHHHCCCCEEEEcCchhhCCHHHHHHHHHHHHHHcCCCEEEECC-CCc---hh-HHHHHHHHhcc
Confidence 4556778889999998877432345666655444477788999999999 322 12 34455655544
No 300
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=30.30 E-value=2e+02 Score=22.63 Aligned_cols=71 Identities=14% Similarity=0.161 Sum_probs=41.8
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcc-hHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKK-CKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~-~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|++|+++ |.+|+.+.-.... .++..+++...|.. +..+..| -.|...+.+++.++.++. +.|+++.-.
T Consensus 22 ~aia~~la~~---G~~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D-v~~~~~v~~~~~~~~~~~g~id~lv~nA 94 (259)
T 3edm_A 22 RACAIRFAQE---GANVVLTYNGAAEGAATAVAEIEKLGRS-ALAIKAD-LTNAAEVEAAISAAADKFGEIHGLVHVA 94 (259)
T ss_dssp HHHHHHHHHT---TCEEEEEECSSCHHHHHHHHHHHTTTSC-CEEEECC-TTCHHHHHHHHHHHHHHHCSEEEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEcCCCHHHHHHHHHHHHhcCCc-eEEEEcC-CCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence 3556777765 4677655333322 23344445555543 4444433 567888888888888776 478888544
No 301
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=30.28 E-value=1.3e+02 Score=20.61 Aligned_cols=61 Identities=5% Similarity=0.040 Sum_probs=37.2
Q ss_pred HHHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHH
Q psy9408 8 EIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVK 75 (219)
Q Consensus 8 ~~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik 75 (219)
...++...+|++.. ....++.++-.. ..+....++..|++..+. . .++.......|..+++
T Consensus 61 ~~g~~l~~~l~~~~-~~~~ii~ls~~~--~~~~~~~~~~~ga~~~l~-K---P~~~~~L~~~i~~~~~ 121 (137)
T 3cfy_A 61 MSGEDVLDWINQND-IPTSVIIATAHG--SVDLAVNLIQKGAEDFLE-K---PINADRLKTSVALHLK 121 (137)
T ss_dssp SBHHHHHHHHHHTT-CCCEEEEEESSC--CHHHHHHHHHTTCSEEEE-S---SCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhcC-CCCCEEEEEecC--cHHHHHHHHHCCccEEEe-C---CCCHHHHHHHHHHHHH
Confidence 34566677777653 234555554332 346677888999986433 3 4677777777766554
No 302
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=30.24 E-value=65 Score=26.92 Aligned_cols=13 Identities=0% Similarity=0.146 Sum_probs=7.9
Q ss_pred echHHHHHHHHhh
Q psy9408 202 VKNVIELIDKLKN 214 (219)
Q Consensus 202 ~~~~~~l~~~L~~ 214 (219)
++.+.+-++.+.+
T Consensus 319 l~~~~~A~~~~~~ 331 (342)
T 4eye_A 319 LSEGRQALQDFAD 331 (342)
T ss_dssp GGGHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh
Confidence 4556666666654
No 303
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=30.21 E-value=2e+02 Score=22.55 Aligned_cols=71 Identities=13% Similarity=0.137 Sum_probs=43.0
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHh-c-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKK-E-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~-~-~~dlVl~G~ 86 (219)
.+.|++|+++ |.+|+++.-.+...++..+++...|. ++..+..| -.|...+...+.++.++ . .+|+++.-.
T Consensus 19 ~~ia~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D-v~~~~~v~~~~~~~~~~~~g~id~lvnnA 91 (260)
T 2qq5_A 19 RGIALQLCKA---GATVYITGRHLDTLRVVAQEAQSLGG-QCVPVVCD-SSQESEVRSLFEQVDREQQGRLDVLVNNA 91 (260)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHSS-EEEEEECC-TTSHHHHHHHHHHHHHHHTTCCCEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHHcCC-ceEEEECC-CCCHHHHHHHHHHHHHhcCCCceEEEECC
Confidence 4567777775 46777665443333344444444453 55555533 46777787888777665 3 589888654
No 304
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=30.15 E-value=1.1e+02 Score=24.78 Aligned_cols=72 Identities=10% Similarity=0.074 Sum_probs=41.0
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEccc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGKQ 87 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~~ 87 (219)
.+.|++|+++ |.+|+.+.-.....++..+++...|. ++..+..| -.|...+..++.++.++. +.|+++.-..
T Consensus 22 ~aia~~la~~---G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D-v~~~~~v~~~~~~~~~~~g~iD~lvnnAg 94 (280)
T 3tox_A 22 RAAALLFARE---GAKVVVTARNGNALAELTDEIAGGGG-EAAALAGD-VGDEALHEALVELAVRRFGGLDTAFNNAG 94 (280)
T ss_dssp HHHHHHHHHT---TCEEEECCSCHHHHHHHHHHHTTTTC-CEEECCCC-TTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEECC-CCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 3456777765 35766544333323333344433443 34444433 467778888888877775 5898886543
No 305
>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12}
Probab=29.92 E-value=44 Score=25.70 Aligned_cols=41 Identities=17% Similarity=-0.055 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcc
Q psy9408 65 SVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQA 109 (219)
Q Consensus 65 ~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~v 109 (219)
..++.|++.+++.++|+|+.-.. .+-..+..+|..||+|++
T Consensus 50 ~l~~~la~~~~~~~~d~Iv~v~~----rG~~~a~~la~~l~~p~~ 90 (190)
T 2dy0_A 50 LSIDLLVERYKNAGITKVVGTEA----RGFLFGAPVALGLGVGFV 90 (190)
T ss_dssp HHHHHHHHHHTTTTCCEEEEETT----HHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHhccCCCCEEEEECc----ccHHHHHHHHHHHCCCEE
Confidence 45666666666567888775432 234688999999999974
No 306
>1kor_A Argininosuccinate synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: ANP ARG; 1.95A {Thermus thermophilus} SCOP: c.26.2.1 d.210.1.1 PDB: 1j1z_A* 1j21_A* 1kh1_A 1kh2_A* 1kh3_A* 1j20_A*
Probab=29.86 E-value=95 Score=27.19 Aligned_cols=71 Identities=23% Similarity=0.285 Sum_probs=46.3
Q ss_pred hhhhcCCCcEEEEEEecCc---chHHHHHHHHhCCCCEEEEEecCCC-------------------CC------HHHHHH
Q psy9408 17 LRESSNKIKEIIAISCGNK---KCKEILQIAMAMGVDRAILIETDTI-------------------LQ------SLSVAK 68 (219)
Q Consensus 17 l~e~~g~g~~V~av~~G~~---~~~~~lr~~~a~GaD~v~~v~~~~~-------------------~d------~~~~A~ 68 (219)
+++.+ |.+|.++++... +.+..-+.|..+|++..+.++-... |. -.....
T Consensus 20 l~~~~--g~~V~av~vd~g~~~e~e~a~~~A~~lGi~~~~vvd~~~ef~~~~~~~~i~~~~~~e~~y~~g~~~~R~~~~~ 97 (400)
T 1kor_A 20 LKETY--RAEVIAFTADIGQGEEVEEAREKALRTGASKAIALDLKEEFVRDFVFPMMRAGAVYEGYYLLGTSIARPLIAK 97 (400)
T ss_dssp HHHHH--TCEEEEEEEESSCSSCHHHHHHHHHHHTCSEEEEEECHHHHHHHTHHHHHHTTCCBTTTBCCTTTTHHHHHHH
T ss_pred HHHhh--CCcEEEEEEeCCCHHHHHHHHHHHHHhCCCeEEEEeCcHHHHHHhhHHHHHcCCccccccccCCccchHHHHH
Confidence 34544 368888888542 3445556688899976666553200 10 112346
Q ss_pred HHHHHHHhcCCCEEEEccccc
Q psy9408 69 LLQVIVKKENPQLVILGKQSI 89 (219)
Q Consensus 69 ~la~~ik~~~~dlVl~G~~s~ 89 (219)
.+.+++++.+.+.|+.|++..
T Consensus 98 ~L~~~A~~~G~~~IatG~~~d 118 (400)
T 1kor_A 98 HLVRIAEEEGAEAIAHGATGK 118 (400)
T ss_dssp HHHHHHHHHTCSEEECCCCTT
T ss_pred HHHHHHHHcCCCEEEECCCCC
Confidence 788888889999999999874
No 307
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=29.84 E-value=1.9e+02 Score=22.24 Aligned_cols=72 Identities=13% Similarity=0.176 Sum_probs=42.7
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEccc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGKQ 87 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~~ 87 (219)
.+.+.+|.++ |.+|+++.-.+...++..+++...|.+ +..+..| -.|+..+.+++.++.++. ++|+|+.-..
T Consensus 25 ~~la~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D-~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag 97 (255)
T 1fmc_A 25 KEIAITFATA---GASVVVSDINADAANHVVDEIQQLGGQ-AFACRCD-ITSEQELSALADFAISKLGKVDILVNNAG 97 (255)
T ss_dssp HHHHHHHHTT---TCEEEEEESCHHHHHHHHHHHHHTTCC-EEEEECC-TTCHHHHHHHHHHHHHHHSSCCEEEECCC
T ss_pred HHHHHHHHHC---CCEEEEEcCCHHHHHHHHHHHHHhCCc-eEEEEcC-CCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 3456667664 467777665443333444444455543 4444433 457777777777776665 6898886443
No 308
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=29.82 E-value=1.9e+02 Score=23.18 Aligned_cols=69 Identities=19% Similarity=0.154 Sum_probs=37.5
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEccc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGKQ 87 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~~ 87 (219)
.+.|++|+++ |.+|+++.-.....++..++ .| .++..+..| -.|.+.+.+.+.++.++. ++|+++.-..
T Consensus 42 ~aia~~la~~---G~~V~~~~r~~~~~~~~~~~---~~-~~~~~~~~D-v~d~~~v~~~~~~~~~~~g~iD~lVnnAg 111 (272)
T 4dyv_A 42 RAVAVALAGA---GYGVALAGRRLDALQETAAE---IG-DDALCVPTD-VTDPDSVRALFTATVEKFGRVDVLFNNAG 111 (272)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHH---HT-SCCEEEECC-TTSHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHC---CCEEEEEECCHHHHHHHHHH---hC-CCeEEEEec-CCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 3455666654 35665544332222222222 23 334444433 457788888888877776 5898886543
No 309
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=29.79 E-value=75 Score=20.94 Aligned_cols=6 Identities=50% Similarity=1.243 Sum_probs=2.3
Q ss_pred CCEEEE
Q psy9408 79 PQLVIL 84 (219)
Q Consensus 79 ~dlVl~ 84 (219)
||+|++
T Consensus 46 ~dlvl~ 51 (120)
T 2a9o_A 46 PDIIIL 51 (120)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 333333
No 310
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=29.76 E-value=1.3e+02 Score=24.95 Aligned_cols=11 Identities=0% Similarity=0.344 Sum_probs=5.5
Q ss_pred chHHHHHHHHh
Q psy9408 203 KNVIELIDKLK 213 (219)
Q Consensus 203 ~~~~~l~~~L~ 213 (219)
+.+.+-++.++
T Consensus 326 ~~~~~A~~~~~ 336 (352)
T 1e3j_A 326 EQTVDAFEAAR 336 (352)
T ss_dssp GGHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 44555555554
No 311
>2nz2_A Argininosuccinate synthase; amino-acid biosynthesis, aspartate, citrulline, ST genomics, structural genomics consortium, SGC, ligase; HET: CIR; 2.40A {Homo sapiens}
Probab=29.49 E-value=81 Score=27.81 Aligned_cols=67 Identities=15% Similarity=0.211 Sum_probs=44.4
Q ss_pred CcEEEEEEecCc---chHHHHHHHHhCCCCEEEEEecCC---------------C----C-C----H-HHHHHHHHHHHH
Q psy9408 24 IKEIIAISCGNK---KCKEILQIAMAMGVDRAILIETDT---------------I----L-Q----S-LSVAKLLQVIVK 75 (219)
Q Consensus 24 g~~V~av~~G~~---~~~~~lr~~~a~GaD~v~~v~~~~---------------~----~-d----~-~~~A~~la~~ik 75 (219)
|.+|+++++... +.+.+-+.|..+|+++.+.++-.. . | . + ......+.++++
T Consensus 29 G~eV~av~vd~g~~~e~e~a~~~A~~lGi~~~~vvd~~~ef~~~~~~~~i~~~a~~e~~y~~g~~~aRp~i~~~l~~~A~ 108 (413)
T 2nz2_A 29 GYDVIAYLANIGQKEDFEEARKKALKLGAKKVFIEDVSREFVEEFIWPAIQSSALYEDRYLLGTSLARPCIARKQVEIAQ 108 (413)
T ss_dssp TEEEEEEEEESSCCCCHHHHHHHHHHHTCSEEEEEECHHHHHHHTHHHHHHTTCCBTTTBCCTTTTHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEECCcHHHHHHHHHHHHHhCCCEEEEEeChHHHHHHHHHHHHHhCcccccccccccccchHHHHHHHHHHHH
Confidence 368999988643 345555668889999666654210 0 0 0 0 122467778888
Q ss_pred hcCCCEEEEcccccC
Q psy9408 76 KENPQLVILGKQSID 90 (219)
Q Consensus 76 ~~~~dlVl~G~~s~d 90 (219)
+.+.+.|++|++..|
T Consensus 109 ~~Ga~~IatGh~~~~ 123 (413)
T 2nz2_A 109 REGAKYVSHGATGKG 123 (413)
T ss_dssp HHTCSEEECCCCTTS
T ss_pred HcCCCEEEECCcCcc
Confidence 899999999999743
No 312
>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*
Probab=29.45 E-value=1.1e+02 Score=26.22 Aligned_cols=43 Identities=12% Similarity=0.076 Sum_probs=31.1
Q ss_pred HHHHHHHHHHhc-----CCCEEEEcccccCCCcCcHHHHHHHHcCCCcc
Q psy9408 66 VAKLLQVIVKKE-----NPQLVILGKQSIDSDNNQTGQMLAALLNWPQA 109 (219)
Q Consensus 66 ~A~~la~~ik~~-----~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~v 109 (219)
-+.+..+++++- +.|+|+++.++ |...-..+.+++.+||++-.
T Consensus 85 a~~Aa~~aL~~ag~~~~dId~li~~t~t-~~~~p~~a~~v~~~LGl~~~ 132 (379)
T 3euo_A 85 AVEASRKAMAEARLVPAQITHMVSTTCT-DSANPGYDHYVAKELGLSDR 132 (379)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEECSS-CCCSSCHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEecC-CCCCCCHHHHHHHHcCCCCC
Confidence 334444555442 46999999887 66677789999999999754
No 313
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=29.39 E-value=2.1e+02 Score=22.69 Aligned_cols=71 Identities=15% Similarity=0.169 Sum_probs=40.9
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcc-hHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKK-CKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~-~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|++|+++ |.+|+.+.-.... .++..++....|.. +..+..| -.|.+.+.+.+.++.++. +.|+++.-.
T Consensus 41 ~aia~~la~~---G~~Vv~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D-l~~~~~v~~~~~~~~~~~g~iD~lvnnA 113 (267)
T 3u5t_A 41 AAIAARLASD---GFTVVINYAGKAAAAEEVAGKIEAAGGK-ALTAQAD-VSDPAAVRRLFATAEEAFGGVDVLVNNA 113 (267)
T ss_dssp HHHHHHHHHH---TCEEEEEESSCSHHHHHHHHHHHHTTCC-EEEEECC-TTCHHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEcCCCHHHHHHHHHHHHhcCCe-EEEEEcC-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 3456677765 3566654333322 23333444455544 4444433 467788888888877775 578887654
No 314
>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB: 1p4a_A*
Probab=29.38 E-value=47 Score=27.80 Aligned_cols=41 Identities=20% Similarity=0.219 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcc
Q psy9408 65 SVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQA 109 (219)
Q Consensus 65 ~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~v 109 (219)
.+++.+++.++..++|+|++-.. .+-.++..+|..||.|++
T Consensus 117 ~la~~la~~~~~~~~d~Iv~V~~----rG~~~A~~lA~~L~vp~v 157 (291)
T 1o57_A 117 KVGKLFASVFAEREIDVVMTVAT----KGIPLAYAAASYLNVPVV 157 (291)
T ss_dssp HHHHHHHHHTTTSCCSEEEEETT----TTHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHhhccCCCEEEEECC----CCHHHHHHHHHHhCCCEE
Confidence 34444444444446888876432 344688999999999975
No 315
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=29.36 E-value=2.1e+02 Score=22.96 Aligned_cols=27 Identities=4% Similarity=0.087 Sum_probs=20.0
Q ss_pred CCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 60 ILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 60 ~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
-.|...+.+++.++.++. ++|+++.-.
T Consensus 84 v~d~~~v~~~~~~~~~~~g~iD~lvnnA 111 (277)
T 3gvc_A 84 VSDEQQIIAMVDACVAAFGGVDKLVANA 111 (277)
T ss_dssp TTCHHHHHHHHHHHHHHHSSCCEEEECC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 457778888888887775 589888654
No 316
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=29.25 E-value=83 Score=26.60 Aligned_cols=62 Identities=10% Similarity=0.051 Sum_probs=42.7
Q ss_pred HHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCC-CCCHHHHHHHHHHHHHhc
Q psy9408 14 AIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDT-ILQSLSVAKLLQVIVKKE 77 (219)
Q Consensus 14 A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~-~~d~~~~A~~la~~ik~~ 77 (219)
-.++++.. ...|+++.=|+-..-+.++.++..|+|-+.+-+.-- ..||...++.+.+++..+
T Consensus 190 I~~Ike~~--~IPVV~IAnGGI~TpedA~~~le~GaDGVmVGrAI~~s~DP~~~Akafv~Av~~~ 252 (291)
T 3o07_A 190 LKDVLEKG--KLPVVNFAAGGVATPADAALLMQLGCDGVFVGSGIFKSSNPVRLATAVVEATTHF 252 (291)
T ss_dssp HHHHHHHT--SCSSCEEBCSSCCSHHHHHHHHHTTCSCEEECGGGGGSSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHcc--CCCEEEecCCCCCCHHHHHHHHHhCCCEEEEchHHhCCCCHHHHHHHHHHHHHhc
Confidence 34556542 234555555665445667778899999988865321 468999999999999875
No 317
>3hsy_A Glutamate receptor 2; ligand-gated ION channel, synapse, cell CELL membrane, endoplasmic reticulum, glycoprotein, ION TRA ionic channel; HET: NAG BMA; 1.75A {Rattus norvegicus} PDB: 3h5v_A* 3h5w_A 3o2j_A* 2wjw_A* 2wjx_A 3n6v_A
Probab=29.20 E-value=1.2e+02 Score=25.38 Aligned_cols=45 Identities=11% Similarity=-0.008 Sum_probs=18.2
Q ss_pred CHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCccc
Q psy9408 62 QSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQAT 110 (219)
Q Consensus 62 d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt 110 (219)
|+...+++..+++.+ +...|+-+.+| ........++...++|+++
T Consensus 45 d~~~a~~~~~~li~~-~V~aiiG~~~S---~~~~av~~~~~~~~ip~is 89 (376)
T 3hsy_A 45 NSFAVTNAFCSQFSR-GVYAIFGFYDK---KSVNTITSFCGTLHVSFIT 89 (376)
T ss_dssp CHHHHHHHHHHHHHT-TCSEEEECCCT---TTHHHHHHHHHHHTCEEEE
T ss_pred ChHHHHHHHHHHHhc-CcEEEECCCch---hHHHHHHHHhccCcCceee
Confidence 444444444444432 34443333322 1122333444455555544
No 318
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=29.18 E-value=38 Score=22.96 Aligned_cols=13 Identities=15% Similarity=0.320 Sum_probs=5.6
Q ss_pred HHHHHHHHhCCCC
Q psy9408 38 KEILQIAMAMGVD 50 (219)
Q Consensus 38 ~~~lr~~~a~GaD 50 (219)
+++++.+.....|
T Consensus 36 ~~al~~~~~~~~d 48 (120)
T 3f6p_A 36 NEAVEMVEELQPD 48 (120)
T ss_dssp HHHHHHHHTTCCS
T ss_pred HHHHHHHhhCCCC
Confidence 3444444444444
No 319
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=29.14 E-value=1.1e+02 Score=21.35 Aligned_cols=63 Identities=10% Similarity=0.057 Sum_probs=40.6
Q ss_pred hHHHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCC-CCEEEEEecCCCCCHHHHHHHHHHHHHh
Q psy9408 7 DEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMG-VDRAILIETDTILQSLSVAKLLQVIVKK 76 (219)
Q Consensus 7 D~~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~G-aD~v~~v~~~~~~d~~~~A~~la~~ik~ 76 (219)
+...++...+|++.. ....|++++-.. ..+...+++..| ++..+. . .++.......|..+++.
T Consensus 70 ~~~g~~~~~~l~~~~-~~~~ii~~s~~~--~~~~~~~~~~~g~~~~~l~-K---P~~~~~l~~~i~~~l~~ 133 (153)
T 3hv2_A 70 QMDGPTLLARIHQQY-PSTTRILLTGDP--DLKLIAKAINEGEIYRYLS-K---PWDDQELLLALRQALEH 133 (153)
T ss_dssp SSCHHHHHHHHHHHC-TTSEEEEECCCC--CHHHHHHHHHTTCCSEEEC-S---SCCHHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHhHC-CCCeEEEEECCC--CHHHHHHHHhCCCcceEEe-C---CCCHHHHHHHHHHHHHH
Confidence 344566777777764 345666555332 356778899999 886443 2 46777777777777654
No 320
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=29.11 E-value=2.1e+02 Score=22.52 Aligned_cols=72 Identities=11% Similarity=0.099 Sum_probs=40.1
Q ss_pred HHHHHHhhhhcCCCcEEEEEEe-cCcchHHHHHHHHhC-CCCEEEEEecCCCCCH----HHHHHHHHHHHHhc-CCCEEE
Q psy9408 11 IESAIRLRESSNKIKEIIAISC-GNKKCKEILQIAMAM-GVDRAILIETDTILQS----LSVAKLLQVIVKKE-NPQLVI 83 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~-G~~~~~~~lr~~~a~-GaD~v~~v~~~~~~d~----~~~A~~la~~ik~~-~~dlVl 83 (219)
.+.|.+|+++ |.+|+++.- .+...++..+++... |. ++..+..| -.|. ..+..++.++.++. ++|+++
T Consensus 25 ~~ia~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~D-l~~~~~~~~~~~~~~~~~~~~~g~id~lv 99 (276)
T 1mxh_A 25 HSIAVRLHQQ---GFRVVVHYRHSEGAAQRLVAELNAARAG-SAVLCKGD-LSLSSSLLDCCEDIIDCSFRAFGRCDVLV 99 (276)
T ss_dssp HHHHHHHHHT---TCEEEEEESSCHHHHHHHHHHHHHHSTT-CEEEEECC-CSSSTTHHHHHHHHHHHHHHHHSCCCEEE
T ss_pred HHHHHHHHHC---CCEEEEEeCCChHHHHHHHHHHHHhcCC-ceEEEecc-CCCccccHHHHHHHHHHHHHhcCCCCEEE
Confidence 3456677765 467777655 333233333333332 53 34444433 3455 66777777776665 589888
Q ss_pred Eccc
Q psy9408 84 LGKQ 87 (219)
Q Consensus 84 ~G~~ 87 (219)
.-..
T Consensus 100 ~nAg 103 (276)
T 1mxh_A 100 NNAS 103 (276)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 6543
No 321
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=29.03 E-value=2.1e+02 Score=22.55 Aligned_cols=72 Identities=19% Similarity=0.181 Sum_probs=43.2
Q ss_pred HHHHHHhhhhcCCCcEEEEEEec------------CcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-
Q psy9408 11 IESAIRLRESSNKIKEIIAISCG------------NKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE- 77 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G------------~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~- 77 (219)
.+.|++|+++ |.+|+.+... ....++...+....|. ++..+..| -.|...+.+.+.++.++.
T Consensus 24 ~~ia~~l~~~---G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D-~~~~~~v~~~~~~~~~~~g 98 (287)
T 3pxx_A 24 RSHAVKLAEE---GADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGR-KAYTAEVD-VRDRAAVSRELANAVAEFG 98 (287)
T ss_dssp HHHHHHHHHT---TCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTS-CEEEEECC-TTCHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHC---CCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCC-ceEEEEcc-CCCHHHHHHHHHHHHHHcC
Confidence 4566777765 4677766543 2222333334444554 45555433 567888888888888776
Q ss_pred CCCEEEEccc
Q psy9408 78 NPQLVILGKQ 87 (219)
Q Consensus 78 ~~dlVl~G~~ 87 (219)
+.|+++.-..
T Consensus 99 ~id~lv~nAg 108 (287)
T 3pxx_A 99 KLDVVVANAG 108 (287)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 5898886543
No 322
>2fyw_A Conserved hypothetical protein; structural genomics, PSI, midwest CENT structural genomics, MCSG, protein structure initiative; 2.40A {Streptococcus pneumoniae} SCOP: c.135.1.1
Probab=29.03 E-value=54 Score=26.97 Aligned_cols=65 Identities=18% Similarity=0.201 Sum_probs=38.2
Q ss_pred EEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCC-cCcHHHHHHHHc
Q psy9408 28 IAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSD-NNQTGQMLAALL 104 (219)
Q Consensus 28 ~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~-~~~v~~~lA~~L 104 (219)
+|++-|.. ...++.+.+.|+|- ++..+-.+.. +..+++.+..+|.+|+. +..- -..++..|.+++
T Consensus 180 VAv~~GsG--~~~~~~a~~~gaD~--~ITGd~~~h~-------~~~A~e~gi~~i~~GH~-tE~~~~~~l~~~L~~~~ 245 (267)
T 2fyw_A 180 VAICGGSG--QSFYKDALAKGADV--YITGDIYYHT-------AQDMLSDGLLALDPGHY-IEVIFVEKIAALLSQWK 245 (267)
T ss_dssp EEEESSSC--GGGHHHHHHTTCSE--EEESCCCHHH-------HHHHHHTTCEEEECCGG-GGGHHHHHHHHHHHHHH
T ss_pred EEEEcCCC--HHHHHHHHHcCCCE--EEEccCcHHH-------HHHHHHCCCeEEECCcH-HHHHHHHHHHHHHHHHh
Confidence 46666654 35788999999993 3343322211 22334568999999998 5422 123445555554
No 323
>1zuh_A Shikimate kinase; alpha-beta protein, transferase; 1.80A {Helicobacter pylori} PDB: 1zui_A* 3hr7_A 3muf_A* 3mrs_A 3n2e_A*
Probab=28.98 E-value=22 Score=26.22 Aligned_cols=28 Identities=21% Similarity=0.232 Sum_probs=22.1
Q ss_pred CEEEEcccccCCCcCcHHHHHHHHcCCCcc
Q psy9408 80 QLVILGKQSIDSDNNQTGQMLAALLNWPQA 109 (219)
Q Consensus 80 dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~v 109 (219)
.++|+|...+|+ ..++-+||.+||+|++
T Consensus 9 ~i~l~G~~GsGK--STva~~La~~lg~~~i 36 (168)
T 1zuh_A 9 HLVLIGFMGSGK--SSLAQELGLALKLEVL 36 (168)
T ss_dssp EEEEESCTTSSH--HHHHHHHHHHHTCCEE
T ss_pred eEEEECCCCCCH--HHHHHHHHHHhCCCEE
Confidence 577888877665 3589999999999876
No 324
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=28.90 E-value=1.1e+02 Score=26.82 Aligned_cols=36 Identities=19% Similarity=0.181 Sum_probs=19.7
Q ss_pred HHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEE
Q psy9408 14 AIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILI 55 (219)
Q Consensus 14 A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v 55 (219)
|.+++... |.+|+++. .. ++-+..+..+|+|.++..
T Consensus 245 avqlak~~--Ga~vi~~~-~~---~~~~~~~~~lGa~~vi~~ 280 (456)
T 3krt_A 245 ATQFALAG--GANPICVV-SS---PQKAEICRAMGAEAIIDR 280 (456)
T ss_dssp HHHHHHHT--TCEEEEEE-SS---HHHHHHHHHHTCCEEEET
T ss_pred HHHHHHHc--CCeEEEEE-CC---HHHHHHHHhhCCcEEEec
Confidence 44555544 35776665 22 233455566788876643
No 325
>3i45_A Twin-arginine translocation pathway signal protei; structural genomics; 1.36A {Rhodospirillum rubrum}
Probab=28.89 E-value=1.4e+02 Score=24.65 Aligned_cols=50 Identities=6% Similarity=-0.233 Sum_probs=35.1
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcccc
Q psy9408 59 TILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATF 111 (219)
Q Consensus 59 ~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~ 111 (219)
...++......+.+++.+.+++.|+.+..|.. ..-...++...++|+++.
T Consensus 54 ~~~~~~~~~~~~~~li~~~~v~aiiG~~~s~~---~~a~~~~~~~~~ip~i~~ 103 (387)
T 3i45_A 54 DGGDPGKAVTAAQELLTRHGVHALAGTFLSHV---GLAVSDFARQRKVLFMAS 103 (387)
T ss_dssp CTTCHHHHHHHHHHHHHHHCCSEEEECCSHHH---HHHHHHHHHHHTCCEEEC
T ss_pred CCCCHHHHHHHHHHHHHhcCCEEEECCcchHH---HHHHHHHHHHcCceEEec
Confidence 36788887888888888778998876655421 222345677889998874
No 326
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=28.81 E-value=2.2e+02 Score=22.68 Aligned_cols=71 Identities=7% Similarity=0.105 Sum_probs=42.6
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecC-cchHHHHHHHH-hCCCCEEEEEecCCCCC----HHHHHHHHHHHHHhc-CCCEEE
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGN-KKCKEILQIAM-AMGVDRAILIETDTILQ----SLSVAKLLQVIVKKE-NPQLVI 83 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~-~~~~~~lr~~~-a~GaD~v~~v~~~~~~d----~~~~A~~la~~ik~~-~~dlVl 83 (219)
.+.|++|+++ |.+|+++.-.+ ...++..+++- ..|. ++..+..| -.| ...+..++.++.++. +.|+++
T Consensus 37 ~aia~~L~~~---G~~V~~~~r~~~~~~~~~~~~l~~~~~~-~~~~~~~D-v~~~~~~~~~v~~~~~~~~~~~g~iD~lv 111 (288)
T 2x9g_A 37 RAIAVKLHQT---GYRVVIHYHNSAEAAVSLADELNKERSN-TAVVCQAD-LTNSNVLPASCEEIINSCFRAFGRCDVLV 111 (288)
T ss_dssp HHHHHHHHHH---TCEEEEEESSCHHHHHHHHHHHHHHSTT-CEEEEECC-CSCSTTHHHHHHHHHHHHHHHHSCCCEEE
T ss_pred HHHHHHHHHC---CCeEEEEeCCchHHHHHHHHHHHhhcCC-ceEEEEee-cCCccCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 4566777775 36777766554 33333334333 4553 45555533 345 777777777777665 589888
Q ss_pred Ecc
Q psy9408 84 LGK 86 (219)
Q Consensus 84 ~G~ 86 (219)
.-.
T Consensus 112 nnA 114 (288)
T 2x9g_A 112 NNA 114 (288)
T ss_dssp ECC
T ss_pred ECC
Confidence 654
No 327
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=28.72 E-value=83 Score=25.77 Aligned_cols=36 Identities=8% Similarity=0.156 Sum_probs=23.5
Q ss_pred CCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEccc
Q psy9408 49 VDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQ 87 (219)
Q Consensus 49 aD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~ 87 (219)
+|+.+.+. .++...+...|.+++++.++|+|+.+..
T Consensus 46 ~d~~~~~~---~~~~~~~~~~l~~~~~~~~~d~vi~~~~ 81 (331)
T 2pn1_A 46 ADQHYIVP---KIDEVEYIDHLLTLCQDEGVTALLTLID 81 (331)
T ss_dssp SSSEEECC---CTTSTTHHHHHHHHHHHHTCCEEEESSH
T ss_pred hhceecCC---CCCChhHHHHHHHHHHHcCCCEEEeCCc
Confidence 45554433 1223456778888888889999997643
No 328
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=28.66 E-value=1.2e+02 Score=23.90 Aligned_cols=66 Identities=26% Similarity=0.238 Sum_probs=39.9
Q ss_pred HHHHHHHhhhhcCCCcEEEEEEecCcch------HHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEE
Q psy9408 10 AIESAIRLRESSNKIKEIIAISCGNKKC------KEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVI 83 (219)
Q Consensus 10 Ale~A~~l~e~~g~g~~V~av~~G~~~~------~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl 83 (219)
.++...++++.. +..|. .|+..+. ++.++.++..|+|.+++- +... .....+.+.+++.+.++++
T Consensus 68 ~~~~i~~i~~~~--~~pv~--~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~--~~~~---~~~~~~~~~~~~~g~~~~~ 138 (248)
T 1geq_A 68 AFWIVKEFRRHS--STPIV--LMTYYNPIYRAGVRNFLAEAKASGVDGILVV--DLPV---FHAKEFTEIAREEGIKTVF 138 (248)
T ss_dssp HHHHHHHHHTTC--CCCEE--EEECHHHHHHHCHHHHHHHHHHHTCCEEEET--TCCG---GGHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHhhC--CCCEE--EEeccchhhhcCHHHHHHHHHHCCCCEEEEC--CCCh---hhHHHHHHHHHHhCCCeEE
Confidence 355666677654 23444 4443222 578899999999998872 2211 1234566777778877666
Q ss_pred E
Q psy9408 84 L 84 (219)
Q Consensus 84 ~ 84 (219)
.
T Consensus 139 ~ 139 (248)
T 1geq_A 139 L 139 (248)
T ss_dssp E
T ss_pred E
Confidence 3
No 329
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=28.44 E-value=1.3e+02 Score=20.09 Aligned_cols=62 Identities=15% Similarity=0.192 Sum_probs=36.2
Q ss_pred HHHHHHHHhhhhc-CCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHh
Q psy9408 9 IAIESAIRLRESS-NKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKK 76 (219)
Q Consensus 9 ~Ale~A~~l~e~~-g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~ 76 (219)
..++...+|++.. .....++.++-.. ..+....++..|++..+. . .++.......|..++++
T Consensus 63 ~g~~l~~~l~~~~~~~~~~ii~~s~~~--~~~~~~~~~~~ga~~~l~-K---P~~~~~l~~~i~~~~~~ 125 (128)
T 1jbe_A 63 DGLELLKTIRAXXAMSALPVLMVTAEA--KKENIIAAAQAGASGYVV-K---PFTAATLEEKLNKIFEK 125 (128)
T ss_dssp CHHHHHHHHHC--CCTTCCEEEEESSC--CHHHHHHHHHTTCSEEEE-S---SCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhhcccCCCcEEEEecCc--cHHHHHHHHHhCcCceee-c---CCCHHHHHHHHHHHHHH
Confidence 4556666776521 1123455554332 346677888899986443 2 46777777777766654
No 330
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=28.34 E-value=2.1e+02 Score=22.28 Aligned_cols=71 Identities=13% Similarity=-0.043 Sum_probs=41.8
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc--CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE--NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~--~~dlVl~G~ 86 (219)
.+.+.+|.++ |.+|+++.-.+...++..+++...|.. +..+..| -.|......++.++.++. ++|+|+.-.
T Consensus 28 ~~la~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D-~~~~~~~~~~~~~~~~~~~~~id~li~~A 100 (266)
T 1xq1_A 28 HAIVEEFAGF---GAVIHTCARNEYELNECLSKWQKKGFQ-VTGSVCD-ASLRPEREKLMQTVSSMFGGKLDILINNL 100 (266)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCC-EEEEECC-TTSHHHHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred HHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHhcCCe-eEEEECC-CCCHHHHHHHHHHHHHHhCCCCcEEEECC
Confidence 3456677765 467777654433334444445455554 4334323 457777777777777664 689887543
No 331
>3sm9_A Mglur3, metabotropic glutamate receptor 3; structural genomics, structural genomics consortium, SGC, CE membrane, G-protein coupled receptor; HET: Z99; 2.26A {Homo sapiens}
Probab=28.23 E-value=1.8e+02 Score=25.47 Aligned_cols=102 Identities=15% Similarity=0.039 Sum_probs=53.3
Q ss_pred CCCHhhHHHHHHHHHhhhhcCCCcEEEEEEecCcc----hHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc
Q psy9408 2 SINPFDEIAIESAIRLRESSNKIKEIIAISCGNKK----CKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE 77 (219)
Q Consensus 2 ~iNp~D~~Ale~A~~l~e~~g~g~~V~av~~G~~~----~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~ 77 (219)
.+-|.|..--....++....| ...|..|.-...- .+...+++-+.|..-++...-+.......+...+.+.+++.
T Consensus 164 r~~psd~~~~~a~~~ll~~fg-w~~V~ii~~dd~~G~~~~~~~~~~~~~~Gi~v~~~~~i~~~~~~~d~~~~l~~~i~~s 242 (479)
T 3sm9_A 164 RTVPPDFYQAKAMAEILRFFN-WTYVSTVASEGDYGETGIEAFEQEARLRNISIATAEKVGRSNIRKSYDSVIRELLQKP 242 (479)
T ss_dssp ESSCCTHHHHHHHHHHHHHTT-CCEEEEEEESSHHHHHHHHHHHHHHHTTTCEEEEEEEECC--CHHHHHHHHHHHHTCT
T ss_pred EeCCcHHHHHHHHHHHHHHCC-CeEEEEEEecchhhHHHHHHHHHHHHHCCceEEEEEEcCCCCChHHHHHHHHHHHhcC
Confidence 345666666556666666664 3467666644321 22233444556765444332222233455556665777777
Q ss_pred CCCEEEEcccccCCCcCcHHHHHHHHcCCC
Q psy9408 78 NPQLVILGKQSIDSDNNQTGQMLAALLNWP 107 (219)
Q Consensus 78 ~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p 107 (219)
++|+|++.....+ .. .-.+-+..+|+.
T Consensus 243 ~a~vIi~~~~~~~--~~-~l~~~~~~~g~~ 269 (479)
T 3sm9_A 243 NARVVVLFMRSDD--SR-ELIAAASRANAS 269 (479)
T ss_dssp TCCEEEEECCHHH--HH-HHHHHHHHTTCC
T ss_pred CCeEEEEEcChHH--HH-HHHHHHHHhCCE
Confidence 8999887665432 11 222334566654
No 332
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=28.19 E-value=2.4e+02 Score=22.77 Aligned_cols=69 Identities=7% Similarity=0.025 Sum_probs=45.3
Q ss_pred HHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 12 ESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 12 e~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
+.|++|+++ |..|+...--.+. .+.+.+....|.+-.++ ..| -.|...+.+.+.+++++. ..|+++--.
T Consensus 22 aia~~la~~---Ga~Vv~~~r~~~~-~~~~~~~~~~~~~~~~~-~~D-v~~~~~v~~~v~~~~~~~G~iDiLVNnA 91 (258)
T 4gkb_A 22 AISMRLAEE---RAIPVVFARHAPD-GAFLDALAQRQPRATYL-PVE-LQDDAQCRDAVAQTIATFGRLDGLVNNA 91 (258)
T ss_dssp HHHHHHHHT---TCEEEEEESSCCC-HHHHHHHHHHCTTCEEE-ECC-TTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHc---CCEEEEEECCccc-HHHHHHHHhcCCCEEEE-Eee-cCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence 456777775 4677766655443 34556666666654443 323 568888888999988887 489888654
No 333
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=28.19 E-value=91 Score=25.50 Aligned_cols=38 Identities=24% Similarity=0.201 Sum_probs=25.6
Q ss_pred HHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcccc
Q psy9408 69 LLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATF 111 (219)
Q Consensus 69 ~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~ 111 (219)
.+.+.+++. .++|+-..++. ..+++.+|..+|+|++..
T Consensus 119 ~vm~~l~~~--gL~fvDS~Ts~---~S~a~~~A~~~gvp~~~r 156 (245)
T 2nly_A 119 AILEVVKEK--NAFIIDSGTSP---HSLIPQLAEELEVPYATR 156 (245)
T ss_dssp HHHHHHHHT--TCEEEECCCCS---SCSHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHC--CCEEEcCCCCc---ccHHHHHHHHcCCCeEEe
Confidence 333444443 47777665543 459999999999998853
No 334
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=28.16 E-value=2e+02 Score=22.47 Aligned_cols=69 Identities=7% Similarity=0.004 Sum_probs=35.0
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEccc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGKQ 87 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~~ 87 (219)
.+.|++|+++ |.+|+++.-.....++..++. | .++..+..| -.|...+.+++.++.++. +.|+++.-..
T Consensus 21 ~aia~~l~~~---G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~D-v~~~~~v~~~~~~~~~~~g~id~lv~nAg 90 (257)
T 3tpc_A 21 AAVTRMLAQE---GATVLGLDLKPPAGEEPAAEL---G-AAVRFRNAD-VTNEADATAALAFAKQEFGHVHGLVNCAG 90 (257)
T ss_dssp HHHHHHHHHT---TCEEEEEESSCC----------------CEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHC---CCEEEEEeCChHHHHHHHHHh---C-CceEEEEcc-CCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 3455666654 356666555444333333322 2 223333322 457778888888877776 5898886543
No 335
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=28.13 E-value=2.1e+02 Score=22.17 Aligned_cols=71 Identities=18% Similarity=0.230 Sum_probs=42.4
Q ss_pred HHHHHHhhhhcCCCcEEEEEEe-cCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISC-GNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~-G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.+.+|+++ |.+|+++.- .+...++..+++...|. ++..+..| -.|...+.+.+.++.++. ++|+|+.-.
T Consensus 21 ~~~a~~l~~~---G~~V~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D-~~~~~~~~~~~~~~~~~~g~id~li~~A 93 (261)
T 1gee_A 21 KSMAIRFATE---KAKVVVNYRSKEDEANSVLEEIKKVGG-EAIAVKGD-VTVESDVINLVQSAIKEFGKLDVMINNA 93 (261)
T ss_dssp HHHHHHHHHT---TCEEEEEESSCHHHHHHHHHHHHHTTC-EEEEEECC-TTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEcCCChHHHHHHHHHHHhcCC-ceEEEECC-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 3456677765 468777665 32223333444444553 45555533 457777778887777765 589888654
No 336
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=27.86 E-value=80 Score=23.98 Aligned_cols=95 Identities=14% Similarity=0.121 Sum_probs=59.6
Q ss_pred HHHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEccc
Q psy9408 8 EIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQ 87 (219)
Q Consensus 8 ~~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~ 87 (219)
..+++.|.++++.+. |.++.| +=| ....++++ .|.+--.+.+.+.+-+ ..|.+.|++.+.|+|+.=..
T Consensus 24 ~~~v~~ak~~~~ll~-Gf~l~A-T~g---Ta~~L~e~--~Gl~v~~v~k~~eGG~-----p~I~d~I~~geIdlVInt~~ 91 (152)
T 1b93_A 24 QMLMSWVERHQPLLE-QHVLYA-TGT---TGNLISRA--TGMNVNAMLSGPMGGD-----QQVGALISEGKIDVLIFFWD 91 (152)
T ss_dssp HHHHHHHHHTHHHHT-TSEEEE-ETT---HHHHHHHH--HCCCCEEECCGGGTHH-----HHHHHHHHTTCCCEEEEECC
T ss_pred HHHHHHHHHHHHHhC-CCEEEE-ccH---HHHHHHHH--hCceeEEEEecCCCCC-----chHHHHHHCCCccEEEEcCC
Confidence 578899999998762 567765 323 34667764 3544222222211112 35888899999999987433
Q ss_pred -----ccCCCcCcHHHHHHHHcCCCcccceeEE
Q psy9408 88 -----SIDSDNNQTGQMLAALLNWPQATFASKI 115 (219)
Q Consensus 88 -----s~d~~~~~v~~~lA~~Lg~p~vt~v~~l 115 (219)
+-+.| +..==|+|-..++|++|+....
T Consensus 92 pl~~~~h~~D-~~~IrR~A~~~~IP~~T~latA 123 (152)
T 1b93_A 92 PLNAVPHDPD-VKALLRLATVWNIPVATNVATA 123 (152)
T ss_dssp TTSCCTTHHH-HHHHHHHHHHTTCCEESSHHHH
T ss_pred cccCCccccc-HHHHHHHHHHcCCCEEeCHHHH
Confidence 21111 3445789999999999987654
No 337
>2h1v_A Ferrochelatase; rossman fold, PI-helix, lyase; 1.20A {Bacillus subtilis} PDB: 2hk6_A 1c1h_A* 1ld3_A 1n0i_A 1ak1_A 3goq_A 1doz_A 2q2n_A* 3m4z_A 2h1w_A 2ac2_A 2q3j_A* 2ac4_A 2q2o_A* 1c9e_A* 2c8j_A
Probab=27.46 E-value=1.3e+02 Score=25.08 Aligned_cols=54 Identities=13% Similarity=0.134 Sum_probs=39.8
Q ss_pred CHhhHHHHHHHHHhhhhcCC-CcEEEEEE--ec-----CcchHHHHHHHHhC-CCCEEEEEec
Q psy9408 4 NPFDEIAIESAIRLRESSNK-IKEIIAIS--CG-----NKKCKEILQIAMAM-GVDRAILIET 57 (219)
Q Consensus 4 Np~D~~Ale~A~~l~e~~g~-g~~V~av~--~G-----~~~~~~~lr~~~a~-GaD~v~~v~~ 57 (219)
+||..+.-+.++.|++++|. ...++-.+ +| .+..++.++++.+. |+.+++++.-
T Consensus 194 DpY~~~~~~t~~~l~e~l~~~~~~~~fqSrg~g~~~Wl~P~~~~~l~~l~~~~G~k~v~V~P~ 256 (310)
T 2h1v_A 194 DPYPDQLHESAKLIAEGAGVSEYAVGWQSEGNTPDPWLGPDVQDLTRDLFEQKGYQAFVYVPV 256 (310)
T ss_dssp CCHHHHHHHHHHHHHHHHTCSCEEEEEESCCCCSSCBSSCBHHHHHHHHHHHHCCSEEEEECT
T ss_pred CChHHHHHHHHHHHHHHcCCCCEEEEEEcCCCCCCCcCCCCHHHHHHHHHHHcCCceEEEECC
Confidence 58888899999999998852 12333333 22 24578899999998 9999999884
No 338
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=27.27 E-value=2.3e+02 Score=22.33 Aligned_cols=72 Identities=8% Similarity=0.054 Sum_probs=41.5
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcc-hHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEccc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKK-CKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGKQ 87 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~-~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~~ 87 (219)
.+.|++|+++ |.+|+.+.--..+ .++..+.+...|. ++..+..| -.|...+.+++.++.++. ++|+++.-..
T Consensus 40 ~a~a~~l~~~---G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D-l~~~~~v~~~~~~~~~~~g~id~li~nAg 113 (272)
T 4e3z_A 40 AAVCRLAARQ---GWRVGVNYAANREAADAVVAAITESGG-EAVAIPGD-VGNAADIAAMFSAVDRQFGRLDGLVNNAG 113 (272)
T ss_dssp HHHHHHHHHT---TCEEEEEESSCHHHHHHHHHHHHHTTC-EEEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHC---CCEEEEEcCCChhHHHHHHHHHHhcCC-cEEEEEcC-CCCHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence 4556777765 3676554333222 2333334444443 45555533 467777888887777765 5898886543
No 339
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=27.19 E-value=72 Score=26.37 Aligned_cols=13 Identities=15% Similarity=0.151 Sum_probs=8.1
Q ss_pred echHHHHHHHHhh
Q psy9408 202 VKNVIELIDKLKN 214 (219)
Q Consensus 202 ~~~~~~l~~~L~~ 214 (219)
++.+.+-++.+.+
T Consensus 302 l~~~~~A~~~~~~ 314 (325)
T 3jyn_A 302 LKDAAKAQIELSA 314 (325)
T ss_dssp GGGHHHHHHHHHT
T ss_pred HHHHHHHHHHHHc
Confidence 4566666776654
No 340
>3o21_A Glutamate receptor 3; periplasmatic binding protein, oligomerization, membrane, TR protein; HET: NAG; 2.20A {Rattus norvegicus} PDB: 3p3w_A
Probab=27.13 E-value=1e+02 Score=26.02 Aligned_cols=54 Identities=11% Similarity=-0.050 Sum_probs=31.5
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCccc
Q psy9408 53 ILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQAT 110 (219)
Q Consensus 53 ~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt 110 (219)
+++.|+...|+.....+..+++.+ +...|+-+.+| ........++...++|+++
T Consensus 45 ~~~~D~~~~d~~~a~~~a~~li~~-~V~aiiG~~~S---~~~~a~~~i~~~~~iP~Is 98 (389)
T 3o21_A 45 YHVDHLDSSNSFSVTNAFCSQFSR-GVYAIFGFYDQ---MSMNTLTSFCGALHTSFVT 98 (389)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHTT-TCSCEEECCCT---TTHHHHHHHHHHHTCCEEE
T ss_pred EEEEecCCCChHHHHHHHHHHHhc-CcEEEEeCCCh---hHHHHHHHHhccCCCceee
Confidence 344443333776666666666665 66666554443 2233445677778888874
No 341
>4eyg_A Twin-arginine translocation pathway signal; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: VNL; 1.86A {Rhodopseudomonas palustris} PDB: 4ey3_A* 3t0n_A* 4eyk_A*
Probab=26.98 E-value=98 Score=25.31 Aligned_cols=49 Identities=10% Similarity=0.043 Sum_probs=27.6
Q ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcccc
Q psy9408 60 ILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATF 111 (219)
Q Consensus 60 ~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~ 111 (219)
..++......+.+++.+.+++.|+.+..+.. ..-...++...++|+++.
T Consensus 54 ~~~~~~~~~~~~~li~~~~v~~iiG~~~s~~---~~~~~~~~~~~~ip~i~~ 102 (368)
T 4eyg_A 54 AAIPDNTKRLAQELIVNDKVNVIAGFGITPA---ALAAAPLATQAKVPEIVM 102 (368)
T ss_dssp TTCHHHHHHHHHHHHHTSCCSEEEECSSHHH---HHHHHHHHHHHTCCEEES
T ss_pred CCCHHHHHHHHHHHHhcCCcEEEECCCccHH---HHHHHHHHHhCCceEEec
Confidence 4566666666666666667777774433311 112234556667777654
No 342
>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} SCOP: c.61.1.1
Probab=26.92 E-value=97 Score=23.48 Aligned_cols=44 Identities=9% Similarity=-0.091 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHhc---CCCEEEEcccccCCCcCcHHHHHHHHcCCCcccc
Q psy9408 64 LSVAKLLQVIVKKE---NPQLVILGKQSIDSDNNQTGQMLAALLNWPQATF 111 (219)
Q Consensus 64 ~~~A~~la~~ik~~---~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~ 111 (219)
......|++.+++. ++++|+.-. ..+-.++..+|.+||+|+...
T Consensus 21 ~~~~~~la~~i~~~~~~~~~vvv~i~----~gg~~~a~~la~~l~~p~~~~ 67 (183)
T 1hgx_A 21 QKRIRELAAELTEFYEDKNPVMICVL----TGAVFFYTDLLKHLDFQLEPD 67 (183)
T ss_dssp HHHHHHHHHHHHHHHTTTCCEEEEET----TTTHHHHHHHHTTCCSCCEEE
T ss_pred HHHHHHHHHHHHHHcCCCCcEEEEeC----cChHHHHHHHHHHcCCCccee
Confidence 34455566666532 577766544 245678999999999997543
No 343
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=26.90 E-value=2.1e+02 Score=21.89 Aligned_cols=71 Identities=11% Similarity=0.171 Sum_probs=41.4
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHH-HhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIA-MAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~-~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|.+|.++ |.+|+++.-.+...++..+++ -..| .++..+..| -.|...+.+++.++.++. ++|+|+.-.
T Consensus 16 ~~~a~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D-~~~~~~~~~~~~~~~~~~~~id~li~~A 88 (250)
T 2cfc_A 16 LAIATRFLAR---GDRVAALDLSAETLEETARTHWHAYA-DKVLRVRAD-VADEGDVNAAIAATMEQFGAIDVLVNNA 88 (250)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHSTTTG-GGEEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHHHHhcC-CcEEEEEec-CCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence 3556777765 467777654433333333332 1223 345555533 467778888888777765 589888644
No 344
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=26.89 E-value=3.2e+02 Score=24.47 Aligned_cols=88 Identities=10% Similarity=0.081 Sum_probs=50.3
Q ss_pred HHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccc
Q psy9408 9 IAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQS 88 (219)
Q Consensus 9 ~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s 88 (219)
..|++..+|.+. +.++..+..|+...+..++.....-.+++...- .++.......++ ..|++++....
T Consensus 344 ~li~a~~~l~~~---~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~~~~------~aD~~v~PS~~ 411 (536)
T 3vue_A 344 VMAAAIPELMQE---DVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVV---KFNAPLAHLIMA------GADVLAVPSRF 411 (536)
T ss_dssp HHHHHHHHHTTS---SCEEEEECCBCHHHHHHHHHHHHHSTTTEEEEC---SCCHHHHHHHHH------HCSEEEECCSC
T ss_pred HHHHHHHHhHhh---CCeEEEEeccCchHHHHHHHHHhhcCCceEEEE---eccHHHHHHHHH------hhheeeccccc
Confidence 356666666654 356666666655444445443332234444433 233332222222 36999998775
Q ss_pred cCCCcCcHHHHHHHHcCCCcccc
Q psy9408 89 IDSDNNQTGQMLAALLNWPQATF 111 (219)
Q Consensus 89 ~d~~~~~v~~~lA~~Lg~p~vt~ 111 (219)
++--+..+=|-..|+|+|+.
T Consensus 412 ---E~fgl~~lEAma~G~PvI~s 431 (536)
T 3vue_A 412 ---EPCGLIQLQGMRYGTPCACA 431 (536)
T ss_dssp ---CSSCSHHHHHHHTTCCEEEC
T ss_pred ---CCCCHHHHHHHHcCCCEEEc
Confidence 33447889999999997743
No 345
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=26.88 E-value=96 Score=25.63 Aligned_cols=16 Identities=19% Similarity=0.301 Sum_probs=9.1
Q ss_pred HHHHHHhCCCCEEEEEe
Q psy9408 40 ILQIAMAMGVDRAILIE 56 (219)
Q Consensus 40 ~lr~~~a~GaD~v~~v~ 56 (219)
.++-+.++|+ +++.++
T Consensus 165 ~~~~a~~~Ga-~Vi~~~ 180 (334)
T 3qwb_A 165 LNQLLKMKGA-HTIAVA 180 (334)
T ss_dssp HHHHHHHTTC-EEEEEE
T ss_pred HHHHHHHCCC-EEEEEe
Confidence 4455556677 555554
No 346
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=26.83 E-value=1.1e+02 Score=20.58 Aligned_cols=62 Identities=11% Similarity=0.172 Sum_probs=36.5
Q ss_pred hHHHHHHHHHhhhhcC-CCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHH
Q psy9408 7 DEIAIESAIRLRESSN-KIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIV 74 (219)
Q Consensus 7 D~~Ale~A~~l~e~~g-~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~i 74 (219)
+...++...+|++... ....|+.++-.. ..+....++..|++..+. . .+++......+.+++
T Consensus 58 ~~~g~~~~~~l~~~~~~~~~pii~~s~~~--~~~~~~~~~~~Ga~~~l~-K---P~~~~~L~~~i~~~l 120 (122)
T 3gl9_A 58 VMDGFTVLKKLQEKEEWKRIPVIVLTAKG--GEEDESLALSLGARKVMR-K---PFSPSQFIEEVKHLL 120 (122)
T ss_dssp SSCHHHHHHHHHTSTTTTTSCEEEEESCC--SHHHHHHHHHTTCSEEEE-S---SCCHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHhcccccCCCEEEEecCC--chHHHHHHHhcChhhhcc-C---CCCHHHHHHHHHHHh
Confidence 3345666677765321 134566666433 346677888999986433 3 467776666666554
No 347
>2iyv_A Shikimate kinase, SK; transferase, aromatic amino acid biosynthesis, P-loop kinase, metal- binding, shikimate pathway; HET: ADP; 1.35A {Mycobacterium tuberculosis} SCOP: c.37.1.2 PDB: 2iyr_A* 2iyq_A* 2iyt_A 2iyu_A* 2iys_A* 2iyw_A* 2iyx_A* 2iyy_A* 2iyz_A* 2g1k_A* 1l4y_A* 1u8a_A* 1we2_A* 1zyu_A* 2dfn_A* 2dft_A* 2g1j_A 1l4u_A* 3baf_A*
Probab=26.81 E-value=30 Score=25.83 Aligned_cols=29 Identities=24% Similarity=0.322 Sum_probs=22.3
Q ss_pred CCEEEEcccccCCCcCcHHHHHHHHcCCCcc
Q psy9408 79 PQLVILGKQSIDSDNNQTGQMLAALLNWPQA 109 (219)
Q Consensus 79 ~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~v 109 (219)
+-++|+|...+|+ ..++-.||.+||++++
T Consensus 3 ~~I~l~G~~GsGK--sT~a~~La~~lg~~~i 31 (184)
T 2iyv_A 3 PKAVLVGLPGSGK--STIGRRLAKALGVGLL 31 (184)
T ss_dssp CSEEEECSTTSSH--HHHHHHHHHHHTCCEE
T ss_pred CeEEEECCCCCCH--HHHHHHHHHHcCCCEE
Confidence 4578888877665 3588889999998876
No 348
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=26.74 E-value=53 Score=27.89 Aligned_cols=17 Identities=29% Similarity=0.343 Sum_probs=10.7
Q ss_pred HHHHHHhCCCCEEEEEe
Q psy9408 40 ILQIAMAMGVDRAILIE 56 (219)
Q Consensus 40 ~lr~~~a~GaD~v~~v~ 56 (219)
+++-|.++|+.+++.++
T Consensus 209 a~q~a~~~Ga~~Vi~~~ 225 (378)
T 3uko_A 209 VAEGAKTAGASRIIGID 225 (378)
T ss_dssp HHHHHHHHTCSCEEEEC
T ss_pred HHHHHHHcCCCeEEEEc
Confidence 34555566777777665
No 349
>3lp8_A Phosphoribosylamine-glycine ligase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.15A {Ehrlichia chaffeensis}
Probab=26.72 E-value=64 Score=28.34 Aligned_cols=81 Identities=11% Similarity=0.054 Sum_probs=43.8
Q ss_pred EEEEEEecCcchHHHHHHHH-h-CCCCEEEEEecCC---CCC-----HHHHHHHHHHHHHhcCCCEEEEcccccCCCcCc
Q psy9408 26 EIIAISCGNKKCKEILQIAM-A-MGVDRAILIETDT---ILQ-----SLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQ 95 (219)
Q Consensus 26 ~V~av~~G~~~~~~~lr~~~-a-~GaD~v~~v~~~~---~~d-----~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~ 95 (219)
....+.+|...-+..+-..+ . .|.+++++..... ..+ .......|.+++++.++|+|+.|....- ...
T Consensus 21 ~m~ilvlG~ggre~ala~~l~~s~~v~~v~~~pgn~g~~~~~~~~~i~~~d~~~l~~~a~~~~id~vv~g~E~~l--~~~ 98 (442)
T 3lp8_A 21 SMNVLVIGSGGREHSMLHHIRKSTLLNKLFIAPGREGMSGLADIIDIDINSTIEVIQVCKKEKIELVVIGPETPL--MNG 98 (442)
T ss_dssp CEEEEEEECSHHHHHHHHHHTTCTTEEEEEEEECCGGGTTTSEECCCCTTCHHHHHHHHHHTTCCEEEECSHHHH--HTT
T ss_pred CCEEEEECCChHHHHHHHHHHhCCCCCEEEEECCChHHhhccceeecCcCCHHHHHHHHHHhCCCEEEECCcHHH--HHH
Confidence 34566777765444554444 2 4567777765321 000 0112356777888899999998754321 001
Q ss_pred HHHHHHHHcCCCcc
Q psy9408 96 TGQMLAALLNWPQA 109 (219)
Q Consensus 96 v~~~lA~~Lg~p~v 109 (219)
+ ....+.+|+|++
T Consensus 99 ~-~~~l~~~Gi~~~ 111 (442)
T 3lp8_A 99 L-SDALTEEGILVF 111 (442)
T ss_dssp H-HHHHHHTTCEEE
T ss_pred H-HHHHHhcCCcEe
Confidence 1 223345677765
No 350
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=26.69 E-value=84 Score=26.56 Aligned_cols=17 Identities=24% Similarity=0.272 Sum_probs=10.1
Q ss_pred HHHHHHhCCCCEEEEEe
Q psy9408 40 ILQIAMAMGVDRAILIE 56 (219)
Q Consensus 40 ~lr~~~a~GaD~v~~v~ 56 (219)
+++-|.++|+.+++.++
T Consensus 211 aiqlak~~Ga~~Vi~~~ 227 (376)
T 1e3i_A 211 AIIGCKIAGASRIIAID 227 (376)
T ss_dssp HHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHcCCCeEEEEc
Confidence 34555566776666654
No 351
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=26.52 E-value=1.4e+02 Score=19.59 Aligned_cols=61 Identities=11% Similarity=0.140 Sum_probs=35.9
Q ss_pred HHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHh
Q psy9408 9 IAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKK 76 (219)
Q Consensus 9 ~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~ 76 (219)
..++...++++.. ....++.++-.. ..+....++..|++..+. . .+++......+..+++.
T Consensus 58 ~g~~~~~~l~~~~-~~~~ii~~s~~~--~~~~~~~~~~~g~~~~l~-k---p~~~~~l~~~i~~~~~~ 118 (121)
T 2pl1_A 58 DGLSLIRRWRSND-VSLPILVLTARE--SWQDKVEVLSAGADDYVT-K---PFHIEEVMARMQALMRR 118 (121)
T ss_dssp CHHHHHHHHHHTT-CCSCEEEEESCC--CHHHHHHHHHTTCSEEEE-S---SCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcC-CCCCEEEEecCC--CHHHHHHHHHcCccceEE-C---CCCHHHHHHHHHHHHHh
Confidence 3456666676543 234555555332 245567788889886443 2 46677666766666543
No 352
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=26.49 E-value=2.2e+02 Score=21.76 Aligned_cols=72 Identities=14% Similarity=0.141 Sum_probs=41.8
Q ss_pred HHHHHHhhhhcCCCcEEEEE-EecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAI-SCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av-~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|.+|+++ |.+|+++ .-.+...++..+++...|..-.+.+..| -.|...+..++.++.++. ++|+|+.-.
T Consensus 15 ~~~a~~l~~~---G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D-~~~~~~~~~~~~~~~~~~~~~d~li~~A 88 (245)
T 2ph3_A 15 RAIALRLAED---GFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGAN-LLEAEAATALVHQAAEVLGGLDTLVNNA 88 (245)
T ss_dssp HHHHHHHHTT---TCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECC-TTSHHHHHHHHHHHHHHHTCCCEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEecc-CCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 4556777765 4677765 2232223333444445565533324433 457777777777777665 589888654
No 353
>3n0w_A ABC branched chain amino acid family transporter, periplasmic ligand binding protein...; receptor family ligand binding region; HET: MSE; 1.88A {Burkholderia xenovorans}
Probab=26.42 E-value=89 Score=25.89 Aligned_cols=49 Identities=4% Similarity=-0.166 Sum_probs=35.2
Q ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcccc
Q psy9408 60 ILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATF 111 (219)
Q Consensus 60 ~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~ 111 (219)
..++......+.+++.+.+.+.|+-+..|.. ..-...++...++|+++.
T Consensus 55 ~~~~~~a~~~~~~li~~~~v~~iiG~~~s~~---~~a~~~~~~~~~ip~i~~ 103 (379)
T 3n0w_A 55 QMKTDVALSIAREWFDRDGVDAIFDVVNSGT---ALAINNLVKDKKKLAFIT 103 (379)
T ss_dssp TTCHHHHHHHHHHHHHHSCCCEEEECCCHHH---HHHHHHHHHHHTCEEEEC
T ss_pred CCCHHHHHHHHHHHHHhCCceEEEcCCCcHH---HHHHHHHHHHcCceEEEc
Confidence 5788888888888888788999886655421 223345677889998875
No 354
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=26.35 E-value=96 Score=26.94 Aligned_cols=59 Identities=19% Similarity=0.190 Sum_probs=33.9
Q ss_pred HHHHH-hCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEE-EcccccCCCcCcHHHHHHHHc
Q psy9408 41 LQIAM-AMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVI-LGKQSIDSDNNQTGQMLAALL 104 (219)
Q Consensus 41 lr~~~-a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl-~G~~s~d~~~~~v~~~lA~~L 104 (219)
+...+ ..|.+- ...++-....+......+.+.+++.++|+|+ +|..|. .+++-.+|..+
T Consensus 64 v~~~L~~~g~~~-~~f~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGsv----iD~AK~iA~~~ 124 (407)
T 1vlj_A 64 VVDSLKKHGIEW-VEVSGVKPNPVLSKVHEAVEVAKKEKVEAVLGVGGGSV----VDSAKAVAAGA 124 (407)
T ss_dssp HHHHHHHTTCEE-EEECCCCSSCBHHHHHHHHHHHHHTTCSEEEEEESHHH----HHHHHHHHHHT
T ss_pred HHHHHHHcCCeE-EEecCccCCCCHHHHHHHHHHHHhcCCCEEEEeCChhH----HHHHHHHHHHH
Confidence 33333 456643 3333212223445566666777888999988 555443 33788888765
No 355
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=26.30 E-value=53 Score=29.79 Aligned_cols=46 Identities=15% Similarity=0.222 Sum_probs=33.0
Q ss_pred HHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcccceeE
Q psy9408 69 LLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASK 114 (219)
Q Consensus 69 ~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~~ 114 (219)
.+++.+++-+-=+|++|......+..+.--.+|+++|+|+++...+
T Consensus 201 ~~~~~l~~a~rpvi~~G~g~~~~~a~~~l~~lae~~~~Pv~~t~~~ 246 (566)
T 2vbi_A 201 ATVALLEKSASPVMLLGSKLRAANALAATETLADKLQCAVTIMAAA 246 (566)
T ss_dssp HHHHHHHTCSCEEEEECTTTTTTTCHHHHHHHHHHHCCEEEEEGGG
T ss_pred HHHHHHHhCCCCEEEECcCccccchHHHHHHHHHHhCCCEEEcccc
Confidence 3444555445558888887765555677889999999999877654
No 356
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=26.27 E-value=48 Score=30.07 Aligned_cols=45 Identities=16% Similarity=0.180 Sum_probs=32.2
Q ss_pred HHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcccceeE
Q psy9408 70 LQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASK 114 (219)
Q Consensus 70 la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~~ 114 (219)
+++.+++-+-=+|++|......+..+---.+|+++|+|+++...+
T Consensus 202 ~~~~l~~a~rpvil~G~g~~~~~a~~~l~~lae~~~~Pv~~t~~~ 246 (568)
T 2wvg_A 202 TLKFIANRDKVAVLVGSKLRAAGAEEAAVKFADALGGAVATMAAA 246 (568)
T ss_dssp HHHHHTTCCCEEEEECTTTTTTTCHHHHHHHHHHHCCEEEEEGGG
T ss_pred HHHHHHhCCCCEEEECccccccchHHHHHHHHHHhCCCEEEchhc
Confidence 334444444458899988765555677889999999999877653
No 357
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=26.19 E-value=1.1e+02 Score=21.15 Aligned_cols=63 Identities=13% Similarity=0.117 Sum_probs=40.4
Q ss_pred HHHHHHHHHhhh--hcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc
Q psy9408 8 EIAIESAIRLRE--SSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE 77 (219)
Q Consensus 8 ~~Ale~A~~l~e--~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~ 77 (219)
...++...+|++ .. ....|++++-.. ..+....++..|++..+. . .++.......|..+++..
T Consensus 65 ~~g~~~~~~l~~~~~~-~~~pii~ls~~~--~~~~~~~~~~~g~~~~l~-k---p~~~~~L~~~i~~~~~~~ 129 (147)
T 2zay_A 65 ISGMDLFNSLKKNPQT-ASIPVIALSGRA--TAKEEAQLLDMGFIDFIA-K---PVNAIRLSARIKRVLKLL 129 (147)
T ss_dssp SCHHHHHHHHHTSTTT-TTSCEEEEESSC--CHHHHHHHHHHTCSEEEE-S---SCCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCccc-CCCCEEEEeCCC--CHHHHHHHHhCCCCEEEe-C---CCCHHHHHHHHHHHHHHH
Confidence 345667777776 22 234566555333 356677888999996543 2 467777888887777654
No 358
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=26.17 E-value=2.3e+02 Score=21.96 Aligned_cols=68 Identities=13% Similarity=0.106 Sum_probs=39.5
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|.+|.++ |.+|+++.-.+...++..++. |. ++..+..| -.|...+..++.++.++. ++|+|+.-.
T Consensus 26 ~~~a~~l~~~---G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~D-~~~~~~v~~~~~~~~~~~g~id~li~~A 94 (265)
T 2o23_A 26 LATAERLVGQ---GASAVLLDLPNSGGEAQAKKL---GN-NCVFAPAD-VTSEKDVQTALALAKGKFGRVDVAVNCA 94 (265)
T ss_dssp HHHHHHHHHT---TCEEEEEECTTSSHHHHHHHH---CT-TEEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEeCCcHhHHHHHHHh---CC-ceEEEEcC-CCCHHHHHHHHHHHHHHCCCCCEEEECC
Confidence 3455666664 367777665554433333333 33 34444433 457777777777777665 689888644
No 359
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=26.07 E-value=2.1e+02 Score=26.75 Aligned_cols=84 Identities=14% Similarity=0.181 Sum_probs=55.3
Q ss_pred cEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCC-C---------CCH----HHHHHHHHHHHHhc-------------
Q psy9408 25 KEIIAISCGNKKCKEILQIAMAMGVDRAILIETDT-I---------LQS----LSVAKLLQVIVKKE------------- 77 (219)
Q Consensus 25 ~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~-~---------~d~----~~~A~~la~~ik~~------------- 77 (219)
.+|..+-+|+-. -..++.+.+.|+-++.++++|. . +.. ..-|.++++.+++.
T Consensus 327 arVLIVGaGGLG-s~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~~~~I 405 (615)
T 4gsl_A 327 TKVLLLGAGTLG-CYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLSI 405 (615)
T ss_dssp CEEEEECCSHHH-HHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEECCCC
T ss_pred CeEEEECCCHHH-HHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEeeccc
Confidence 467777777654 4678889999999999999763 1 110 01223333333222
Q ss_pred -------------------------CCCEEEEcccccCCCcCcHHHHHHHHcCCCcccc
Q psy9408 78 -------------------------NPQLVILGKQSIDSDNNQTGQMLAALLNWPQATF 111 (219)
Q Consensus 78 -------------------------~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~ 111 (219)
++|+|+...-+. .++......+...+.|+++.
T Consensus 406 pm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tDn~--~tR~~ln~~c~~~~~PlI~a 462 (615)
T 4gsl_A 406 PMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSR--ESRWLPSLLSNIENKTVINA 462 (615)
T ss_dssp CCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSG--GGTHHHHHHHHHTTCEEEEE
T ss_pred cccCccccchhhhcCCHHHHHHHhhcCCEEEecCCCH--HHHHHHHHHHHHcCCeEEEE
Confidence 467887655443 57888999999999999974
No 360
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=26.06 E-value=41 Score=30.50 Aligned_cols=46 Identities=13% Similarity=0.153 Sum_probs=32.6
Q ss_pred HHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcccceeE
Q psy9408 69 LLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASK 114 (219)
Q Consensus 69 ~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~~ 114 (219)
.+++.+++-+-=+|++|......+..+---.+|+++|+|+++...+
T Consensus 203 ~~~~~l~~a~rpvIl~G~g~~~~~a~~~l~~lae~~~~Pv~~t~~g 248 (563)
T 2vk8_A 203 TILVLDKDAKNPVILADACCSRHDVKAETKKLIDLTQFPAFVTPMG 248 (563)
T ss_dssp HHHHHHHHCSSEEEEECHHHHHTTCHHHHHHHHHHHCCCEEECTTT
T ss_pred HHHHHHHhCCCCEEEECcCccccchHHHHHHHHHHhCCCEEECccc
Confidence 3444555545558899987754455567789999999999877654
No 361
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}
Probab=25.90 E-value=1.6e+02 Score=25.16 Aligned_cols=44 Identities=11% Similarity=0.088 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHhc-----CCCEEEEcccccCCCcCcHHHHHHHHcCCCc
Q psy9408 65 SVAKLLQVIVKKE-----NPQLVILGKQSIDSDNNQTGQMLAALLNWPQ 108 (219)
Q Consensus 65 ~~A~~la~~ik~~-----~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~ 108 (219)
-.+.++.+++++- +.|.|++|..+.+..+...+.+++.+||+|.
T Consensus 32 L~~~a~~~Al~~agi~~~~Id~v~~g~~~~~~~~~~~a~~~~~~lGl~~ 80 (395)
T 4e1l_A 32 LGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGLGQNVARQIAINAGIPN 80 (395)
T ss_dssp HHHHHHHHHHHHTTCCGGGCCEEEEECCCCSSTTCCHHHHHHHHTTCCT
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcchHHHHHHHHcCCCC
Confidence 3445555666553 4689999998877777789999999999973
No 362
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=25.86 E-value=1.6e+02 Score=20.53 Aligned_cols=62 Identities=8% Similarity=-0.066 Sum_probs=39.0
Q ss_pred HHHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHh
Q psy9408 8 EIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKK 76 (219)
Q Consensus 8 ~~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~ 76 (219)
...++...+|++.. +...|++++-- ...+....++..|++..+. . .++.......|..+++.
T Consensus 60 ~~g~~~~~~l~~~~-~~~pii~ls~~--~~~~~~~~~~~~g~~~~l~-k---P~~~~~L~~~i~~~~~~ 121 (155)
T 1qkk_A 60 MDGLALFRKILALD-PDLPMILVTGH--GDIPMAVQAIQDGAYDFIA-K---PFAADRLVQSARRAEEK 121 (155)
T ss_dssp SCHHHHHHHHHHHC-TTSCEEEEECG--GGHHHHHHHHHTTCCEEEE-S---SCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhhC-CCCCEEEEECC--CChHHHHHHHhcCCCeEEe-C---CCCHHHHHHHHHHHHHH
Confidence 34566677777653 34456655533 3356678899999987543 2 46677777777766653
No 363
>3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii}
Probab=25.86 E-value=27 Score=26.05 Aligned_cols=30 Identities=17% Similarity=0.184 Sum_probs=24.1
Q ss_pred CCCEEEEcccccCCCcCcHHHHHHHHcCCCcc
Q psy9408 78 NPQLVILGKQSIDSDNNQTGQMLAALLNWPQA 109 (219)
Q Consensus 78 ~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~v 109 (219)
..-++|+|...+|+ ..++-+||.+||++++
T Consensus 5 ~~~i~l~G~~GsGK--st~a~~La~~l~~~~i 34 (185)
T 3trf_A 5 LTNIYLIGLMGAGK--TSVGSQLAKLTKRILY 34 (185)
T ss_dssp CCEEEEECSTTSSH--HHHHHHHHHHHCCCEE
T ss_pred CCEEEEECCCCCCH--HHHHHHHHHHhCCCEE
Confidence 45688999877665 3599999999999977
No 364
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=25.71 E-value=2.4e+02 Score=22.03 Aligned_cols=72 Identities=11% Similarity=0.162 Sum_probs=42.0
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhC-CCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEccc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAM-GVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGKQ 87 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~-GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~~ 87 (219)
.+.|.+|+++ |.+|+++.-.+...++..+++... |. ++..+..| -.|.+.+.+++.++.++. +.|+++.-..
T Consensus 21 ~~ia~~l~~~---G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~D-~~~~~~~~~~~~~~~~~~g~id~lv~~Ag 94 (263)
T 3ai3_A 21 LAIAEGFAKE---GAHIVLVARQVDRLHEAARSLKEKFGV-RVLEVAVD-VATPEGVDAVVESVRSSFGGADILVNNAG 94 (263)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECC-TTSHHHHHHHHHHHHHHHSSCSEEEECCC
T ss_pred HHHHHHHHHC---CCEEEEEcCCHHHHHHHHHHHHHhcCC-ceEEEEcC-CCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 3556777765 467776654433233333333222 54 34444433 457788888888877775 5898886543
No 365
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=25.63 E-value=2.4e+02 Score=21.98 Aligned_cols=68 Identities=7% Similarity=0.131 Sum_probs=39.0
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|.+|+++ |.+|+++.-.+...++..++. |. ++..+..| -.|...+..++.++.++. .+|+++.-.
T Consensus 20 ~~ia~~l~~~---G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~D-~~~~~~v~~~~~~~~~~~g~id~lv~~A 88 (253)
T 1hxh_A 20 LEVVKLLLGE---GAKVAFSDINEAAGQQLAAEL---GE-RSMFVRHD-VSSEADWTLVMAAVQRRLGTLNVLVNNA 88 (253)
T ss_dssp HHHHHHHHHT---TCEEEEECSCHHHHHHHHHHH---CT-TEEEECCC-TTCHHHHHHHHHHHHHHHCSCCEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEeCCHHHHHHHHHHc---CC-ceEEEEcc-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 3456777765 467766544332222222222 43 34444433 467888888888877776 479888644
No 366
>3n0x_A Possible substrate binding protein of ABC transpo system; receptor family ligand binding region, structural genomics; HET: MSE; 1.50A {Rhodopseudomonas palustris} PDB: 3nnd_B
Probab=25.61 E-value=1.1e+02 Score=25.48 Aligned_cols=48 Identities=8% Similarity=-0.112 Sum_probs=26.6
Q ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCccc
Q psy9408 60 ILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQAT 110 (219)
Q Consensus 60 ~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt 110 (219)
..|+........+++.+.+.+.|+-+..|. ...-...++...++|+++
T Consensus 55 ~~~~~~a~~~~~~li~~~~v~aiiG~~~s~---~~~a~~~~~~~~~ip~i~ 102 (374)
T 3n0x_A 55 QSKPDLSKAALAEAYQDDGADIAIGTSSSA---AALADLPVAEENKKILIV 102 (374)
T ss_dssp TTCHHHHHHHHHHHHHTSCCSEEEECSSHH---HHHHHHHHHHHHTCCEEE
T ss_pred CCCHHHHHHHHHHHHHhCCceEEEcCCCcH---HHHHHHHHHHHcCccEEE
Confidence 456666666666666666677666444331 112223455666666654
No 367
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}
Probab=25.40 E-value=1.7e+02 Score=25.16 Aligned_cols=43 Identities=12% Similarity=0.030 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHhc-----CCCEEEEcccccCCCcCcHHHHHHHHcCCC
Q psy9408 65 SVAKLLQVIVKKE-----NPQLVILGKQSIDSDNNQTGQMLAALLNWP 107 (219)
Q Consensus 65 ~~A~~la~~ik~~-----~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p 107 (219)
-...++.+++++- +.|.|++|..+.+..+..++.+++.+||+|
T Consensus 34 L~~~A~~~AL~~agl~~~dId~vi~g~~~~~~~~~~~a~~v~~~lGl~ 81 (396)
T 4dd5_A 34 LGVTAAKEAIKRANITPDMIDESLLGGVLTAGLGQNIARQIALGAGIP 81 (396)
T ss_dssp HHHHHHHHHHHHTTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEeecCCCCCchHHHHHHHHcCCC
Confidence 3445555666543 468999999887777778999999999997
No 368
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=25.39 E-value=2.2e+02 Score=22.20 Aligned_cols=69 Identities=20% Similarity=0.161 Sum_probs=38.4
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEccc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGKQ 87 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~~ 87 (219)
...|++|+++ |.+|+.+.-.....++..++ .|.+ +..+..| -.|.+.+.+.+.++.++. +.|+++.-..
T Consensus 20 ~a~a~~l~~~---G~~V~~~~r~~~~~~~~~~~---~~~~-~~~~~~D-v~~~~~v~~~~~~~~~~~g~id~lv~nAg 89 (247)
T 3rwb_A 20 KAIAARLAAD---GATVIVSDINAEGAKAAAAS---IGKK-ARAIAAD-ISDPGSVKALFAEIQALTGGIDILVNNAS 89 (247)
T ss_dssp HHHHHHHHHT---TCEEEEECSCHHHHHHHHHH---HCTT-EEECCCC-TTCHHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred HHHHHHHHHC---CCEEEEEeCCHHHHHHHHHH---hCCc-eEEEEcC-CCCHHHHHHHHHHHHHHCCCCCEEEECCC
Confidence 3456677765 35766544332222222222 2433 3443322 467888888888887775 5898886443
No 369
>2eq5_A 228AA long hypothetical hydantoin racemase; structural genomics, NPPSFA, national project on P structural and functional analyses; 2.20A {Pyrococcus horikoshii}
Probab=25.36 E-value=75 Score=24.83 Aligned_cols=34 Identities=12% Similarity=0.178 Sum_probs=24.5
Q ss_pred cCCCEEEEcccccCCCcCcHHHHHHHHcCCCcccce
Q psy9408 77 ENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFA 112 (219)
Q Consensus 77 ~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v 112 (219)
.+.|.|++|+|..- +-.+...+...+|.|++...
T Consensus 173 ~~~d~IvLgCT~~~--t~~~~~~i~~~~~vpvids~ 206 (228)
T 2eq5_A 173 KGVEVIALGCTGMS--TIGIAPVLEEEVGIPVIDPV 206 (228)
T ss_dssp TTCSEEEECCTHHH--HHTCHHHHHHHHSSCEECHH
T ss_pred cCCCEEEECCCCcc--hHHHHHHHHHHcCCCEEchH
Confidence 48999999999742 01355677777899988554
No 370
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=25.36 E-value=72 Score=22.46 Aligned_cols=61 Identities=11% Similarity=0.152 Sum_probs=37.3
Q ss_pred HHHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHH
Q psy9408 8 EIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVK 75 (219)
Q Consensus 8 ~~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik 75 (219)
...++...+|++.. ....|++++-.. ..+....++..|++..+. . .++.......|..+++
T Consensus 64 ~~g~~~~~~l~~~~-~~~~ii~ls~~~--~~~~~~~~~~~g~~~~l~-k---p~~~~~L~~~i~~~~~ 124 (153)
T 3cz5_A 64 PGGIEATRHIRQWD-GAARILIFTMHQ--GSAFALKAFEAGASGYVT-K---SSDPAELVQAIEAILA 124 (153)
T ss_dssp SCHHHHHHHHHHHC-TTCCEEEEESCC--SHHHHHHHHHTTCSEEEE-T---TSCTTHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHhC-CCCeEEEEECCC--CHHHHHHHHHCCCcEEEe-c---CCCHHHHHHHHHHHHh
Confidence 34566777777763 244666555332 356678889999987543 2 3455566666666654
No 371
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=25.35 E-value=2.4e+02 Score=21.91 Aligned_cols=71 Identities=18% Similarity=0.222 Sum_probs=40.0
Q ss_pred HHHHHHhhhhcCCCcEEEEEEe-cCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISC-GNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~-G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
...+.+|.++ |.+|+++.- .+...++..+++-..|.+ +..+..| -.|...+.+++.++.++. ++|+|+.-.
T Consensus 35 ~~la~~l~~~---G~~v~~~~r~~~~~~~~~~~~l~~~~~~-~~~~~~D-~~~~~~~~~~~~~~~~~~~~~d~vi~~A 107 (274)
T 1ja9_A 35 RGIAIELGRR---GASVVVNYGSSSKAAEEVVAELKKLGAQ-GVAIQAD-ISKPSEVVALFDKAVSHFGGLDFVMSNS 107 (274)
T ss_dssp HHHHHHHHHT---TCEEEEEESSCHHHHHHHHHHHHHTTCC-EEEEECC-TTSHHHHHHHHHHHHHHHSCEEEEECCC
T ss_pred HHHHHHHHHC---CCEEEEEcCCchHHHHHHHHHHHhcCCc-EEEEEec-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 3456667765 367776554 222223333444445654 4444433 457777777777777665 578887543
No 372
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=25.27 E-value=2.5e+02 Score=22.95 Aligned_cols=67 Identities=10% Similarity=0.152 Sum_probs=36.2
Q ss_pred HHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcC-CCEEEEcc
Q psy9408 12 ESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKEN-PQLVILGK 86 (219)
Q Consensus 12 e~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~-~dlVl~G~ 86 (219)
+.|++|+++ |.+|+......+..++..+ ..|.. ++.+..| -.|...+.+.+.++.++.+ .|+++.-.
T Consensus 44 aiA~~la~~---Ga~V~i~~r~~~~l~~~~~---~~g~~-~~~~~~D-v~~~~~v~~~~~~~~~~~G~iDiLVNNA 111 (273)
T 4fgs_A 44 AAAKRFVAE---GARVFITGRRKDVLDAAIA---EIGGG-AVGIQAD-SANLAELDRLYEKVKAEAGRIDVLFVNA 111 (273)
T ss_dssp HHHHHHHHT---TCEEEEEESCHHHHHHHHH---HHCTT-CEEEECC-TTCHHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred HHHHHHHHC---CCEEEEEECCHHHHHHHHH---HcCCC-eEEEEec-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 455666664 3566544433222222222 23433 3333322 4678888888888888764 78777543
No 373
>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A
Probab=25.27 E-value=2.1e+02 Score=21.27 Aligned_cols=63 Identities=24% Similarity=0.264 Sum_probs=42.9
Q ss_pred hHHHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHh
Q psy9408 7 DEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKK 76 (219)
Q Consensus 7 D~~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~ 76 (219)
+...++...+|++.. +...|+.++.... .+....++..|++..+. . .+++......|..+++.
T Consensus 63 ~~~g~~~~~~lr~~~-~~~~ii~ls~~~~--~~~~~~~~~~Ga~~~l~-K---p~~~~~L~~~i~~~~~~ 125 (215)
T 1a04_A 63 GMNGLETLDKLREKS-LSGRIVVFSVSNH--EEDVVTALKRGADGYLL-K---DMEPEDLLKALHQAAAG 125 (215)
T ss_dssp TSCHHHHHHHHHHSC-CCSEEEEEECCCC--HHHHHHHHHTTCSEEEE-T---TCCHHHHHHHHHHHHHS
T ss_pred CCcHHHHHHHHHHhC-CCCcEEEEECCCC--HHHHHHHHHcCCcEEEe-C---CCCHHHHHHHHHHHHcC
Confidence 344677778888763 3456766665432 56678899999997543 2 47788888888877764
No 374
>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}
Probab=25.25 E-value=59 Score=29.28 Aligned_cols=45 Identities=16% Similarity=0.210 Sum_probs=30.3
Q ss_pred HHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccc
Q psy9408 38 KEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQS 88 (219)
Q Consensus 38 ~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s 88 (219)
++.+.++-+.|+|-+|++.+. +++.+ ..||+.+ .+.|+|+.|++-
T Consensus 176 ~~~v~~Lr~~g~D~II~LsH~-G~~~d---~~la~~v--~giD~IlgGHsH 220 (530)
T 4h1s_A 176 QPEVDKLKTLNVNKIIALGHS-GFEMD---KLIAQKV--RGVDVVVGGHSN 220 (530)
T ss_dssp HHHHHHHHHTTCCCEEEEEES-CHHHH---HHHHHHS--TTCCEEECCSSC
T ss_pred HHHHhhhhhcCCCEEEEeccC-CchHH---HHHHhcC--CCCCeeccCCcc
Confidence 445666677899999999964 33222 3444433 368999999875
No 375
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=25.25 E-value=1.9e+02 Score=22.62 Aligned_cols=68 Identities=7% Similarity=-0.001 Sum_probs=39.1
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|.+|+++ |.+|+++.-.+...++..++ .|. ++..+..| -.|.+.+.+++.++.++. ++|+++.-.
T Consensus 19 ~~ia~~l~~~---G~~V~~~~r~~~~~~~~~~~---~~~-~~~~~~~D-~~~~~~~~~~~~~~~~~~g~iD~lv~nA 87 (254)
T 1hdc_A 19 AEAARQAVAA---GARVVLADVLDEEGAATARE---LGD-AARYQHLD-VTIEEDWQRVVAYAREEFGSVDGLVNNA 87 (254)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHT---TGG-GEEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEeCCHHHHHHHHHH---hCC-ceeEEEec-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 3456677765 46777665443222222221 243 34444433 457788888888887776 589888644
No 376
>2oho_A Glutamate racemase; isomerase; 2.25A {Streptococcus pyogenes m1 gas} PDB: 2ohg_A 2ohv_A*
Probab=25.15 E-value=1.6e+02 Score=24.01 Aligned_cols=78 Identities=9% Similarity=0.118 Sum_probs=44.6
Q ss_pred EEEEE---ecCcchHHHHHHHHhC-CCCEEEEEecCC--C---CCHHHHHHHH---HHHHHhcCCCEEEEcccccCCCcC
Q psy9408 27 IIAIS---CGNKKCKEILQIAMAM-GVDRAILIETDT--I---LQSLSVAKLL---QVIVKKENPQLVILGKQSIDSDNN 94 (219)
Q Consensus 27 V~av~---~G~~~~~~~lr~~~a~-GaD~v~~v~~~~--~---~d~~~~A~~l---a~~ik~~~~dlVl~G~~s~d~~~~ 94 (219)
-++|. ||+- ..+++...+ -....+.+.|.. . .+.+.....+ ++.+.+.++|.|++.+.+.. .
T Consensus 14 ~IGv~DsG~Ggl---tv~~~i~~~~P~~~~iy~~D~~~~Pyg~~s~~~i~~~~~~~~~~L~~~g~d~iviaCNTas---~ 87 (273)
T 2oho_A 14 PIGFLDSGVGGL---TVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKEYTWELVNFLLTQNVKMIVFACNTAT---A 87 (273)
T ss_dssp CEEEEESSSTTH---HHHHHHHHHCTTCCEEEEECGGGCCCTTSCHHHHHHHHHHHHHHHHTTTCSEEEECCHHHH---H
T ss_pred cEEEEeCCCcHH---HHHHHHHHHCCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEeCchHh---H
Confidence 36666 6653 455555543 233344444332 1 2334333333 34445668999999987631 1
Q ss_pred cHHHHHHHHcCCCccc
Q psy9408 95 QTGQMLAALLNWPQAT 110 (219)
Q Consensus 95 ~v~~~lA~~Lg~p~vt 110 (219)
..-..+.+.+++|++.
T Consensus 88 ~~l~~lr~~~~iPvig 103 (273)
T 2oho_A 88 VAWEEVKAALDIPVLG 103 (273)
T ss_dssp HHHHHHHHHCSSCEEE
T ss_pred HHHHHHHHhCCCCEEe
Confidence 2247888999999886
No 377
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=25.12 E-value=2.8e+02 Score=22.84 Aligned_cols=71 Identities=10% Similarity=-0.001 Sum_probs=35.5
Q ss_pred HHHHHHhhhhcCCCcEEEEEE-ecCcchHHHHHHHH-hCCCCEEEEEecCCCCCHH-----------------HHHHHHH
Q psy9408 11 IESAIRLRESSNKIKEIIAIS-CGNKKCKEILQIAM-AMGVDRAILIETDTILQSL-----------------SVAKLLQ 71 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~-~G~~~~~~~lr~~~-a~GaD~v~~v~~~~~~d~~-----------------~~A~~la 71 (219)
.+.|.+|+++ |.+|+++. -.....++..+++. ..|. ++..+..| -.|.. .+..++.
T Consensus 60 ~aia~~La~~---G~~Vv~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~D-l~d~~~~~~~~~~~~~~~~~~~~v~~~~~ 134 (328)
T 2qhx_A 60 RSIAEGLHAE---GYAVCLHYHRSAAEANALSATLNARRPN-SAITVQAD-LSNVATAPVSGADGSAPVTLFTRCAELVA 134 (328)
T ss_dssp HHHHHHHHHT---TCEEEEEESSCHHHHHHHHHHHHHHSTT-CEEEEECC-CSSSCBCC-------CCBCHHHHHHHHHH
T ss_pred HHHHHHHHHC---CCEEEEEcCCCHHHHHHHHHHHHhhcCC-eEEEEEee-CCCchhccccccccccccccHHHHHHHHH
Confidence 3456666664 35666554 33322233333332 3453 34444433 22333 5556666
Q ss_pred HHHHhc-CCCEEEEcc
Q psy9408 72 VIVKKE-NPQLVILGK 86 (219)
Q Consensus 72 ~~ik~~-~~dlVl~G~ 86 (219)
++.++. .+|+++.-.
T Consensus 135 ~~~~~~g~iD~lVnnA 150 (328)
T 2qhx_A 135 ACYTHWGRCDVLVNNA 150 (328)
T ss_dssp HHHHHHSCCCEEEECC
T ss_pred HHHHhcCCCCEEEECC
Confidence 666554 578887654
No 378
>2xdq_A Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=24.99 E-value=3.2e+02 Score=23.79 Aligned_cols=31 Identities=19% Similarity=0.097 Sum_probs=21.2
Q ss_pred HHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcc
Q psy9408 70 LQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQA 109 (219)
Q Consensus 70 la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~v 109 (219)
+.+.+++.+||+++.+.... ..+.++|+|+.
T Consensus 386 l~~~i~~~~pDL~ig~~~~~---------~~~~r~G~P~~ 416 (460)
T 2xdq_A 386 QLQRIKALQPDLVITGMAHA---------NPLEARGISTK 416 (460)
T ss_dssp HHHHHHHHCCSEEEECHHHH---------HHHHTBTCCEE
T ss_pred HHHHHhccCCCEEEeCcccC---------ceeeeccCcEE
Confidence 45667778999999553321 34678899975
No 379
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=24.96 E-value=2.6e+02 Score=23.29 Aligned_cols=20 Identities=20% Similarity=0.406 Sum_probs=15.6
Q ss_pred HHHHHHHHhcCCCEEEEccc
Q psy9408 68 KLLQVIVKKENPQLVILGKQ 87 (219)
Q Consensus 68 ~~la~~ik~~~~dlVl~G~~ 87 (219)
..|.+++++.++|+|+.+..
T Consensus 64 ~~l~~~~~~~~~d~v~~~~e 83 (391)
T 1kjq_A 64 DALRRVVELEKPHYIVPEIE 83 (391)
T ss_dssp HHHHHHHHHHCCSEEEECSS
T ss_pred HHHHHHHHHcCCCEEEECCC
Confidence 46667777789999998764
No 380
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=24.89 E-value=2.8e+02 Score=22.45 Aligned_cols=80 Identities=19% Similarity=0.094 Sum_probs=42.8
Q ss_pred HHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccc
Q psy9408 9 IAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQS 88 (219)
Q Consensus 9 ~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s 88 (219)
+-.+.+.+|.+. |.++ ++++|++.-.+..++..+ ....+ .+. ...+-...+ ++++ ..|++++..+
T Consensus 198 ~~~~l~~~L~~~---~~~v-vl~~g~~~e~~~~~~i~~-~~~~~-~l~--g~~sl~el~----ali~--~a~l~I~~DS- 262 (326)
T 2gt1_A 198 HWRELIGLLADS---GIRI-KLPWGAPHEEERAKRLAE-GFAYV-EVL--PKMSLEGVA----RVLA--GAKFVVSVDT- 262 (326)
T ss_dssp HHHHHHHHTTTT---CCEE-EECCSSHHHHHHHHHHHT-TCTTE-EEC--CCCCHHHHH----HHHH--TCSEEEEESS-
T ss_pred HHHHHHHHHHHC---CCcE-EEecCCHHHHHHHHHHHh-hCCcc-ccc--CCCCHHHHH----HHHH--hCCEEEecCC-
Confidence 445666777653 3443 233465432233333333 33333 232 134444333 3443 5799997765
Q ss_pred cCCCcCcHHHHHHHHcCCCccc
Q psy9408 89 IDSDNNQTGQMLAALLNWPQAT 110 (219)
Q Consensus 89 ~d~~~~~v~~~lA~~Lg~p~vt 110 (219)
=+..||+.+|.|+++
T Consensus 263 -------G~~HlAaa~g~P~v~ 277 (326)
T 2gt1_A 263 -------GLSHLTAALDRPNIT 277 (326)
T ss_dssp -------HHHHHHHHTTCCEEE
T ss_pred -------cHHHHHHHcCCCEEE
Confidence 356889999999873
No 381
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=24.87 E-value=2.6e+02 Score=22.17 Aligned_cols=73 Identities=15% Similarity=0.181 Sum_probs=44.6
Q ss_pred HHHHHHHhhhhcCCCcEEEEEEec----------------CcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHH
Q psy9408 10 AIESAIRLRESSNKIKEIIAISCG----------------NKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVI 73 (219)
Q Consensus 10 Ale~A~~l~e~~g~g~~V~av~~G----------------~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ 73 (219)
..+.|++|+++ |.+|+++... ....++..++....|. ++..+..| -.|.+.+.+++.++
T Consensus 24 G~aia~~la~~---G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D-v~~~~~v~~~~~~~ 98 (286)
T 3uve_A 24 GRSHAVRLAQE---GADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNR-RIVTAEVD-VRDYDALKAAVDSG 98 (286)
T ss_dssp HHHHHHHHHHT---TCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTC-CEEEEECC-TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHC---CCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCC-ceEEEEcC-CCCHHHHHHHHHHH
Confidence 34567788875 4688776543 1122333334444554 45555533 56888888888888
Q ss_pred HHhc-CCCEEEEccc
Q psy9408 74 VKKE-NPQLVILGKQ 87 (219)
Q Consensus 74 ik~~-~~dlVl~G~~ 87 (219)
.++. ..|+++.-..
T Consensus 99 ~~~~g~id~lv~nAg 113 (286)
T 3uve_A 99 VEQLGRLDIIVANAG 113 (286)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHhCCCCEEEECCc
Confidence 8776 5898886543
No 382
>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1
Probab=24.84 E-value=89 Score=24.39 Aligned_cols=41 Identities=12% Similarity=0.158 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHhc--CCCEEEEcccccCCCcCcHHHHHHHHcCCCcc
Q psy9408 65 SVAKLLQVIVKKE--NPQLVILGKQSIDSDNNQTGQMLAALLNWPQA 109 (219)
Q Consensus 65 ~~A~~la~~ik~~--~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~v 109 (219)
..++.+++.+++. ++|+|+.-.. .+-.++..+|..||.|++
T Consensus 53 ~~~~~la~~i~~~~~~~d~vv~v~~----~g~~~a~~la~~l~~p~~ 95 (211)
T 2aee_A 53 LIENGFVETIKAHFPEVEVIAGTAT----AGIPHGAIIADKMTLPFA 95 (211)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEETT----TTHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHhhCCCCCEEEEecc----CcHHHHHHHHHHhCCCEE
Confidence 4455666666553 5677776543 345689999999999964
No 383
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=24.75 E-value=3e+02 Score=22.89 Aligned_cols=18 Identities=6% Similarity=0.279 Sum_probs=11.3
Q ss_pred hHHHHHHHHhCCCCEEEE
Q psy9408 37 CKEILQIAMAMGVDRAIL 54 (219)
Q Consensus 37 ~~~~lr~~~a~GaD~v~~ 54 (219)
.++.++.+...|+|-+.+
T Consensus 91 ~~~~~~~~~~~g~d~V~l 108 (326)
T 3bo9_A 91 ADDLVKVCIEEKVPVVTF 108 (326)
T ss_dssp HHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHCCCCEEEE
Confidence 455666666777776554
No 384
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=24.69 E-value=2.6e+02 Score=22.02 Aligned_cols=72 Identities=10% Similarity=0.038 Sum_probs=39.8
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcc-hHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEccc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKK-CKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGKQ 87 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~-~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~~ 87 (219)
.+.|++|+++ |.+|+++...... .++.+......|. ++..+..| -.|...+.+++.++.++. +.|+++....
T Consensus 39 ~~~a~~l~~~---G~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D-l~~~~~v~~~~~~~~~~~g~id~li~nAg 112 (269)
T 3gk3_A 39 AAISRRLHDA---GMAVAVSHSERNDHVSTWLMHERDAGR-DFKAYAVD-VADFESCERCAEKVLADFGKVDVLINNAG 112 (269)
T ss_dssp HHHHHHHHTT---TCEEEEEECSCHHHHHHHHHHHHTTTC-CCEEEECC-TTCHHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred HHHHHHHHHC---CCEEEEEcCCchHHHHHHHHHHHhcCC-ceEEEEec-CCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 3456667654 3566655433322 2222333333443 34444433 457777888887777765 5898886553
No 385
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=24.63 E-value=2.7e+02 Score=22.29 Aligned_cols=72 Identities=10% Similarity=0.000 Sum_probs=38.5
Q ss_pred HHHHHHhhhhcCCCcEEEEEE-ecCcchHHHHHHHH-hCCCCEEEEEecCCCCCHH-----------------HHHHHHH
Q psy9408 11 IESAIRLRESSNKIKEIIAIS-CGNKKCKEILQIAM-AMGVDRAILIETDTILQSL-----------------SVAKLLQ 71 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~-~G~~~~~~~lr~~~-a~GaD~v~~v~~~~~~d~~-----------------~~A~~la 71 (219)
.+.|++|+++ |.+|+.+. -.....++..+++. ..|. ++..+..| -.|.. .+.+++.
T Consensus 23 ~aia~~la~~---G~~V~~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~D-l~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 97 (291)
T 1e7w_A 23 RSIAEGLHAE---GYAVCLHYHRSAAEANALSATLNARRPN-SAITVQAD-LSNVATAPVSGADGSAPVTLFTRCAELVA 97 (291)
T ss_dssp HHHHHHHHHT---TCEEEEEESSCHHHHHHHHHHHHHHSTT-CEEEEECC-CSSSCBCCCC----CCCBCHHHHHHHHHH
T ss_pred HHHHHHHHHC---CCeEEEEcCCCHHHHHHHHHHHhhhcCC-eeEEEEee-cCCcccccccccccccccchHHHHHHHHH
Confidence 3556777765 46777655 44333333333333 4554 34444433 22333 5666666
Q ss_pred HHHHhc-CCCEEEEccc
Q psy9408 72 VIVKKE-NPQLVILGKQ 87 (219)
Q Consensus 72 ~~ik~~-~~dlVl~G~~ 87 (219)
++.++. ..|+++.-..
T Consensus 98 ~~~~~~g~iD~lvnnAg 114 (291)
T 1e7w_A 98 ACYTHWGRCDVLVNNAS 114 (291)
T ss_dssp HHHHHHSCCCEEEECCC
T ss_pred HHHHhcCCCCEEEECCC
Confidence 666665 5898887553
No 386
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}
Probab=24.60 E-value=1.5e+02 Score=26.51 Aligned_cols=42 Identities=12% Similarity=0.077 Sum_probs=30.6
Q ss_pred HHHHHHHHHhc-----CCCEEEEcccccCCCcCcHHHHHHHHcCCCcc
Q psy9408 67 AKLLQVIVKKE-----NPQLVILGKQSIDSDNNQTGQMLAALLNWPQA 109 (219)
Q Consensus 67 A~~la~~ik~~-----~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~v 109 (219)
+.+..+++++- +.|+|+++.++ |...-..+.+|+.+||++-.
T Consensus 115 ~~Aa~~AL~~agi~~~dId~li~~t~t-~~~~P~~a~~v~~~LGl~~~ 161 (465)
T 3e1h_A 115 VEASRKAMAEARLVPAQITHMVSTTCT-DSANPGYDHYVAKELGLSDR 161 (465)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSS-CCCSSCHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeeC-CCCCCcHHHHHHHHhCCCCC
Confidence 34444555442 47899999877 66667789999999999754
No 387
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=24.59 E-value=2.2e+02 Score=25.55 Aligned_cols=62 Identities=16% Similarity=0.137 Sum_probs=33.4
Q ss_pred HHHHHHHhCCCCEEEEEecCC-CCCHHHHHHH--------------------HHHHHHhcCC-CE-EEEcccccCCCcCc
Q psy9408 39 EILQIAMAMGVDRAILIETDT-ILQSLSVAKL--------------------LQVIVKKENP-QL-VILGKQSIDSDNNQ 95 (219)
Q Consensus 39 ~~lr~~~a~GaD~v~~v~~~~-~~d~~~~A~~--------------------la~~ik~~~~-dl-Vl~G~~s~d~~~~~ 95 (219)
+.+..++ ..+|.+|+..+.. ..++...++. +..+.+..++ |+ +++|..+. ..
T Consensus 434 ~~~~~~~-~~aD~vil~~~~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~eai~~~~~~a~~gD~VLv~GaG~~----~~ 508 (524)
T 3hn7_A 434 DSLAQSA-TLADHTLWYEPTGLEWGLKEVIDNATIANPSIGSQQVLSSVDDIIKHICTHAKAGDAIVIMSNGGF----EG 508 (524)
T ss_dssp THHHHHT-TTSSEEEEECCTTCCCSHHHHHHHHHHHCGGGCCEEEESCHHHHHHHHHHHCCTTCEEEEEESSCG----GG
T ss_pred HHHHHHH-hcCCEEEEcCCCCCCCCHHHHHHHHHhhccCCCCeEEECCHHHHHHHHHHhCCCCCEEEEEcCCCH----HH
Confidence 3455554 4699999987432 3344443332 2223333233 54 45565544 45
Q ss_pred HHHHHHHHcC
Q psy9408 96 TGQMLAALLN 105 (219)
Q Consensus 96 v~~~lA~~Lg 105 (219)
++.+|...|.
T Consensus 509 v~~~~~~~l~ 518 (524)
T 3hn7_A 509 IHQRLLTALG 518 (524)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888877663
No 388
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=24.59 E-value=2.8e+02 Score=22.34 Aligned_cols=72 Identities=11% Similarity=0.108 Sum_probs=40.3
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCc--chHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEccc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNK--KCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGKQ 87 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~--~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~~ 87 (219)
.+.|++|+++ |.+|+.+..... ..++.....-..|. ++..+..| -.|...+.+++.++.++. +.|+++.-..
T Consensus 63 ~aia~~la~~---G~~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D-v~d~~~v~~~~~~~~~~~g~iD~lv~nAg 137 (294)
T 3r3s_A 63 RAAAIAYARE---GADVAINYLPAEEEDAQQVKALIEECGR-KAVLLPGD-LSDESFARSLVHKAREALGGLDILALVAG 137 (294)
T ss_dssp HHHHHHHHHT---TCEEEEECCGGGHHHHHHHHHHHHHTTC-CEEECCCC-TTSHHHHHHHHHHHHHHHTCCCEEEECCC
T ss_pred HHHHHHHHHC---CCEEEEEeCCcchhHHHHHHHHHHHcCC-cEEEEEec-CCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 4556677765 367765554422 12222233334453 34444433 457777778887777765 5898886554
No 389
>1jq5_A Glycerol dehydrogenase; oxidoreductase, NAD, glycerol metabolism; HET: NAD; 1.70A {Geobacillus stearothermophilus} SCOP: e.22.1.2 PDB: 1jpu_A* 1jqa_A*
Probab=24.51 E-value=1.5e+02 Score=25.20 Aligned_cols=121 Identities=12% Similarity=0.103 Sum_probs=62.5
Q ss_pred HHHHH-hCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEE-EcccccCCCcCcHHHHHHHHcCCCcccceeEEEEe
Q psy9408 41 LQIAM-AMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVI-LGKQSIDSDNNQTGQMLAALLNWPQATFASKIVLK 118 (219)
Q Consensus 41 lr~~~-a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl-~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~~l~~~ 118 (219)
+...+ ..|.+-.+.+- +.+... .....+.+.+++.++|+|+ +|..|. .+++-.+|.+.++|++.==|.-..+
T Consensus 50 v~~~L~~~g~~~~~~~~-~ge~~~-~~v~~~~~~~~~~~~d~IIavGGGsv----~D~aK~iA~~~~~p~i~IPTTa~tg 123 (370)
T 1jq5_A 50 IVNELKKGNIAAEEVVF-SGEASR-NEVERIANIARKAEAAIVIGVGGGKT----LDTAKAVADELDAYIVIVPTAASTD 123 (370)
T ss_dssp HHHHHHTTTCEEEEEEC-CSSCBH-HHHHHHHHHHHHTTCSEEEEEESHHH----HHHHHHHHHHHTCEEEEEESSCCSS
T ss_pred HHHHHHHcCCeEEEEee-CCCCCH-HHHHHHHHHHHhcCCCEEEEeCChHH----HHHHHHHHHhcCCCEEEeccccCCC
Confidence 33444 35664433232 223333 3445566677788899988 655443 3488999999999987544442111
Q ss_pred -eCCeEEEEEEcCCeEEEEEEc--CCEEEEEecCCCC--CCCCCHHHHHHHccC
Q psy9408 119 -KNNKILVTQEIEDGKETILLS--LPAIITTDLRMNE--PRYVTLMNIIKARKK 167 (219)
Q Consensus 119 -~~~~~~~~R~~~gG~~~~~~~--~P~vvtv~~~~~~--pr~p~l~~~~~A~~~ 167 (219)
+-+...+.-...+........ .|.++-+.+.... |+.-+..+.+.+-..
T Consensus 124 Sevt~~avi~~~~~~~k~~~~~~~~P~~viiDp~ll~tlP~~~~a~g~~Dal~h 177 (370)
T 1jq5_A 124 APTSALSVIYSDDGVFESYRFYKKNPDLVLVDTKIIANAPPRLLASGIADALAT 177 (370)
T ss_dssp CTTCSEEEEECTTSCEEEEEECSSCCSEEEEEHHHHHTSCHHHHHHHHHHHHHH
T ss_pred cccCCeEEEEcCCCceEeeccCCCCCeEEEEChHHHHhCCHHHHHHHHHHHHHH
Confidence 012222222222222222222 5877777765432 444444455555443
No 390
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=24.45 E-value=2.7e+02 Score=24.31 Aligned_cols=87 Identities=14% Similarity=0.124 Sum_probs=51.4
Q ss_pred HHHHHHHHHhhhhcCCCcEEEEEEec-CcchHHHHH-HHHhCCC--CEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEE
Q psy9408 8 EIAIESAIRLRESSNKIKEIIAISCG-NKKCKEILQ-IAMAMGV--DRAILIETDTILQSLSVAKLLQVIVKKENPQLVI 83 (219)
Q Consensus 8 ~~Ale~A~~l~e~~g~g~~V~av~~G-~~~~~~~lr-~~~a~Ga--D~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl 83 (219)
...|+...++.++. + .+..+.+| ++...+.++ .+-..|. ++++++. ..+... +.++.+ ..|+++
T Consensus 391 ~~li~a~~~l~~~~-~--~~~l~i~G~~g~~~~~l~~~~~~~~l~~~~v~~~g---~~~~~~----~~~~~~--~adv~v 458 (568)
T 2vsy_A 391 PQSMARMLAVLREV-P--DSVLWLLSGPGEADARLRAFAHAQGVDAQRLVFMP---KLPHPQ----YLARYR--HADLFL 458 (568)
T ss_dssp HHHHHHHHHHHHHC-T--TCEEEEECCSTTHHHHHHHHHHHTTCCGGGEEEEC---CCCHHH----HHHHGG--GCSEEE
T ss_pred HHHHHHHHHHHHhC-C--CcEEEEecCCHHHHHHHHHHHHHcCCChhHEEeeC---CCCHHH----HHHHHh--cCCEEe
Confidence 34667777776653 2 34555677 444444444 4556786 5666654 122222 333332 479999
Q ss_pred EcccccCCCcCcHHHHHHHHcCCCccc
Q psy9408 84 LGKQSIDSDNNQTGQMLAALLNWPQAT 110 (219)
Q Consensus 84 ~G~~s~d~~~~~v~~~lA~~Lg~p~vt 110 (219)
+.... + .-+...=|-..|.|+|+
T Consensus 459 ~ps~~-~---~g~~~lEAma~G~Pvv~ 481 (568)
T 2vsy_A 459 DTHPY-N---AHTTASDALWTGCPVLT 481 (568)
T ss_dssp CCSSS-C---CSHHHHHHHHTTCCEEB
T ss_pred eCCCC-C---CcHHHHHHHhCCCCEEe
Confidence 87765 3 33677778889999886
No 391
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=24.40 E-value=2.9e+02 Score=24.41 Aligned_cols=67 Identities=10% Similarity=0.051 Sum_probs=41.7
Q ss_pred HHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHH-HcCCC
Q psy9408 38 KEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAA-LLNWP 107 (219)
Q Consensus 38 ~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~-~Lg~p 107 (219)
.+.++.+..+|+|++.+.+.-....|..+...+..+.+..+..+=+ ..-+..+-.++-.+|+ ..|+-
T Consensus 183 ~~v~~~~~~~Ga~~i~l~DTvG~~~P~~v~~lv~~l~~~~~~~i~~---H~Hnd~GlAvAN~laAv~aGa~ 250 (423)
T 3ivs_A 183 LSLYKAVDKIGVNRVGIADTVGCATPRQVYDLIRTLRGVVSCDIEC---HFHNDTGMAIANAYCALEAGAT 250 (423)
T ss_dssp HHHHHHHHHHCCSEEEEEETTSCCCHHHHHHHHHHHHHHCSSEEEE---EEBCTTSCHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhCCCccccCCccCcCCHHHHHHHHHHHHhhcCCeEEE---EECCCCchHHHHHHHHHHhCCC
Confidence 3566778889999876666444678999888888776655433333 2223344556665555 44443
No 392
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=24.37 E-value=1.6e+02 Score=24.24 Aligned_cols=13 Identities=0% Similarity=0.207 Sum_probs=6.9
Q ss_pred echHHHHHHHHhh
Q psy9408 202 VKNVIELIDKLKN 214 (219)
Q Consensus 202 ~~~~~~l~~~L~~ 214 (219)
++.+.+-++.|.+
T Consensus 323 l~~~~~A~~~l~~ 335 (346)
T 4a2c_A 323 FESFAQAVRDIAR 335 (346)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHc
Confidence 3455555665543
No 393
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=24.32 E-value=59 Score=27.27 Aligned_cols=17 Identities=18% Similarity=0.204 Sum_probs=10.2
Q ss_pred HHHHHHhCCCCEEEEEe
Q psy9408 40 ILQIAMAMGVDRAILIE 56 (219)
Q Consensus 40 ~lr~~~a~GaD~v~~v~ 56 (219)
.++-|..+|+.+++.++
T Consensus 182 a~qla~~~Ga~~Vi~~~ 198 (352)
T 3fpc_A 182 SVAGANHLGAGRIFAVG 198 (352)
T ss_dssp HHHHHHTTTCSSEEEEC
T ss_pred HHHHHHHcCCcEEEEEC
Confidence 34555566776666655
No 394
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=24.29 E-value=1.6e+02 Score=23.21 Aligned_cols=51 Identities=12% Similarity=0.130 Sum_probs=33.7
Q ss_pred CHhhHHHHHHHHHhhhhcCCCcEEEEEEecC--c--chHHHHHHHHhCCCCEEEEEe
Q psy9408 4 NPFDEIAIESAIRLRESSNKIKEIIAISCGN--K--KCKEILQIAMAMGVDRAILIE 56 (219)
Q Consensus 4 Np~D~~Ale~A~~l~e~~g~g~~V~av~~G~--~--~~~~~lr~~~a~GaD~v~~v~ 56 (219)
|||-...+....+.++++ |.++....... . ...+.++.+.+.++|-+++..
T Consensus 17 ~~~~~~~~~g~~~~a~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiii~~ 71 (304)
T 3o1i_D 17 DSYWLSVNYGMVSEAEKQ--GVNLRVLEAGGYPNKSRQEQQLALCTQWGANAIILGT 71 (304)
T ss_dssp SHHHHHHHHHHHHHHHHH--TCEEEEEECSSTTCHHHHHHHHHHHHHHTCSEEEECC
T ss_pred CcHHHHHHHHHHHHHHHc--CCeEEEEcCCCCCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 677777777776767766 46766666553 2 123467778888888777754
No 395
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=24.26 E-value=2.5e+02 Score=21.71 Aligned_cols=76 Identities=9% Similarity=0.128 Sum_probs=43.2
Q ss_pred CCHhhHHHHHHHHHhhhhcCCCcEEEEEEecCcc--hHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCC
Q psy9408 3 INPFDEIAIESAIRLRESSNKIKEIIAISCGNKK--CKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQ 80 (219)
Q Consensus 3 iNp~D~~Ale~A~~l~e~~g~g~~V~av~~G~~~--~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~d 80 (219)
-|||-...+....+.+++. |.++......... ..+.++.+.+.++|-+++.. .+.. .+...+++.+.-
T Consensus 19 ~~~~~~~~~~gi~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~l~~~~~dgiIi~~----~~~~----~~~~~l~~~~iP 88 (277)
T 3e61_A 19 SNPFFTLIARGVEDVALAH--GYQVLIGNSDNDIKKAQGYLATFVSHNCTGMISTA----FNEN----IIENTLTDHHIP 88 (277)
T ss_dssp TSHHHHHHHHHHHHHHHHT--TCCEEEEECTTCHHHHHHHHHHHHHTTCSEEEECG----GGHH----HHHHHHHHC-CC
T ss_pred CCHHHHHHHHHHHHHHHHC--CCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEec----CChH----HHHHHHHcCCCC
Confidence 3677777777776767766 4566655544322 12456777788888777744 1222 222034445666
Q ss_pred EEEEcccc
Q psy9408 81 LVILGKQS 88 (219)
Q Consensus 81 lVl~G~~s 88 (219)
+|+++...
T Consensus 89 vV~~~~~~ 96 (277)
T 3e61_A 89 FVFIDRIN 96 (277)
T ss_dssp EEEGGGCC
T ss_pred EEEEeccC
Confidence 77776653
No 396
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=24.22 E-value=61 Score=29.46 Aligned_cols=47 Identities=19% Similarity=0.212 Sum_probs=32.5
Q ss_pred HHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcccceeE
Q psy9408 68 KLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASK 114 (219)
Q Consensus 68 ~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~~ 114 (219)
+.+++.+++-+-=+|++|......+..+.--.+|+++|+|+++...+
T Consensus 207 ~~~~~~l~~a~rpvIl~G~g~~~~~a~~~l~~lae~~~~Pv~~t~~~ 253 (573)
T 2iht_A 207 DQAAALLAEAKHPVLVVGAAAIRSGAVPAIRALAERLNIPVITTYIA 253 (573)
T ss_dssp HHHHHHHHHCSSEEEEECHHHHHTTCHHHHHHHHHHHTCCEEECSTT
T ss_pred HHHHHHHHcCCCeEEEECCCccccCHHHHHHHHHHHHCCeEEEeccc
Confidence 33445555545458888977654445567789999999999976544
No 397
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=24.20 E-value=2.6e+02 Score=21.99 Aligned_cols=78 Identities=15% Similarity=0.180 Sum_probs=48.0
Q ss_pred CCHhhHHHHHHHHHhhhhcCCCcEEEEEEecCcc--hHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCC
Q psy9408 3 INPFDEIAIESAIRLRESSNKIKEIIAISCGNKK--CKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQ 80 (219)
Q Consensus 3 iNp~D~~Ale~A~~l~e~~g~g~~V~av~~G~~~--~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~d 80 (219)
-|||-...+....+.+++. |..+......... ..+.++.+.+.++|-+++...+ ..+ .. .+.+++.+.-
T Consensus 23 ~~~f~~~~~~gi~~~a~~~--g~~~~~~~~~~~~~~~~~~~~~l~~~~vdGiI~~~~~-~~~-----~~-~~~l~~~~iP 93 (295)
T 3hcw_A 23 LNPFYINVLLGISETCNQH--GYGTQTTVSNNMNDLMDEVYKMIKQRMVDAFILLYSK-END-----PI-KQMLIDESMP 93 (295)
T ss_dssp SCHHHHHHHHHHHHHHHTT--TCEEEECCCCSHHHHHHHHHHHHHTTCCSEEEESCCC-TTC-----HH-HHHHHHTTCC
T ss_pred cChHHHHHHHHHHHHHHHC--CCEEEEEcCCCChHHHHHHHHHHHhCCcCEEEEcCcc-cCh-----HH-HHHHHhCCCC
Confidence 3788888888887777776 4676654443321 1235677888999988876432 111 12 2334455666
Q ss_pred EEEEccccc
Q psy9408 81 LVILGKQSI 89 (219)
Q Consensus 81 lVl~G~~s~ 89 (219)
+|+++....
T Consensus 94 vV~i~~~~~ 102 (295)
T 3hcw_A 94 FIVIGKPTS 102 (295)
T ss_dssp EEEESCCCS
T ss_pred EEEECCCCc
Confidence 888876543
No 398
>2h1v_A Ferrochelatase; rossman fold, PI-helix, lyase; 1.20A {Bacillus subtilis} PDB: 2hk6_A 1c1h_A* 1ld3_A 1n0i_A 1ak1_A 3goq_A 1doz_A 2q2n_A* 3m4z_A 2h1w_A 2ac2_A 2q3j_A* 2ac4_A 2q2o_A* 1c9e_A* 2c8j_A
Probab=24.15 E-value=1.8e+02 Score=24.20 Aligned_cols=30 Identities=13% Similarity=0.107 Sum_probs=25.9
Q ss_pred EEEEecCcchHHHHHHHHhCCCCEEEEEec
Q psy9408 28 IAISCGNKKCKEILQIAMAMGVDRAILIET 57 (219)
Q Consensus 28 ~av~~G~~~~~~~lr~~~a~GaD~v~~v~~ 57 (219)
.+.-.|.+..++.++++.+.|+++++++.-
T Consensus 84 ~amry~~P~i~~~l~~l~~~G~~~ivvlPl 113 (310)
T 2h1v_A 84 IGLAHIEPFIEDAVAEMHKDGITEAVSIVL 113 (310)
T ss_dssp EEESSSSSBHHHHHHHHHHTTCCEEEEEES
T ss_pred ehhcCCCCCHHHHHHHHHhcCCCEEEEEEC
Confidence 556668888999999999999999999874
No 399
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=24.15 E-value=44 Score=30.73 Aligned_cols=47 Identities=15% Similarity=0.147 Sum_probs=32.3
Q ss_pred HHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcccceeE
Q psy9408 68 KLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASK 114 (219)
Q Consensus 68 ~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~~ 114 (219)
+.+++.+++-+-=+|++|......+..+.-..+|+++|+|+++...+
T Consensus 217 ~~~~~~l~~a~rpvil~G~g~~~~~a~~~l~~lae~~~~PV~~t~~~ 263 (616)
T 2pan_A 217 EKAVEMLIQAERPVIVAGGGVINADAAALLQQFAELTSVPVIPTLMG 263 (616)
T ss_dssp HHHHHHHHTCSSEEEEECHHHHHTTCHHHHHHHHHHHTCCEEECTTT
T ss_pred HHHHHHHHcCCCeEEEECCCcCcccHHHHHHHHHHHhCCCEEEcccc
Confidence 34445555544448888977654455567789999999999976544
No 400
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=24.08 E-value=3.4e+02 Score=23.27 Aligned_cols=79 Identities=10% Similarity=0.157 Sum_probs=44.4
Q ss_pred EEEecCcchH--HHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEE---cccc--cCCCcCcH-H-HH
Q psy9408 29 AISCGNKKCK--EILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVIL---GKQS--IDSDNNQT-G-QM 99 (219)
Q Consensus 29 av~~G~~~~~--~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~---G~~s--~d~~~~~v-~-~~ 99 (219)
.+-+|....+ ..++++. +.++-+.++.+...+.+.+-.++..+.....++++|| +.+. .....-.+ + +.
T Consensus 192 ~lkIgAr~~~n~~LL~~va--~~~kPVilk~G~~~tl~ei~~Ave~i~~~GN~~viLceRG~~typ~~~~~~vdl~ai~~ 269 (350)
T 1vr6_A 192 IIQIGARNAQNFRLLSKAG--SYNKPVLLKRGFMNTIEEFLLSAEYIANSGNTKIILCERGIRTFEKATRNTLDISAVPI 269 (350)
T ss_dssp EEEECGGGTTCHHHHHHHH--TTCSCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCCTTHHHH
T ss_pred EEEECcccccCHHHHHHHH--ccCCcEEEcCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcChhhhhHHHHHH
Confidence 3344444333 3466665 4567788886544477777777666666566899998 3221 11122222 2 55
Q ss_pred HHHHcCCCcc
Q psy9408 100 LAALLNWPQA 109 (219)
Q Consensus 100 lA~~Lg~p~v 109 (219)
+....++|.+
T Consensus 270 lk~~~~lpVi 279 (350)
T 1vr6_A 270 IRKESHLPIL 279 (350)
T ss_dssp HHHHBSSCEE
T ss_pred HHHhhCCCEE
Confidence 6666677754
No 401
>3hcn_A Ferrochelatase, mitochondrial; metal selectivity, disease mutation, heme biosynthesis, iron, iron-sulfur, lyase, membrane, metal-BIN mitochondrion; HET: CHD HEM GOL; 1.60A {Homo sapiens} SCOP: c.92.1.1 PDB: 2qd3_A* 2qd5_A* 2qd4_A* 3hco_A* 3hcr_A* 2qd1_A* 2hre_A* 3hcp_A* 2qd2_A* 2hrc_A* 1hrk_A* 4f4d_A* 3aqi_A* 2pnj_A* 2po5_A* 2po7_A*
Probab=24.05 E-value=1.3e+02 Score=26.09 Aligned_cols=30 Identities=20% Similarity=0.234 Sum_probs=26.3
Q ss_pred EEEEecCcchHHHHHHHHhCCCCEEEEEec
Q psy9408 28 IAISCGNKKCKEILQIAMAMGVDRAILIET 57 (219)
Q Consensus 28 ~av~~G~~~~~~~lr~~~a~GaD~v~~v~~ 57 (219)
.+.-.|.+..++.++++.+.|+++++++.-
T Consensus 97 ~amry~~P~i~~~l~~l~~~G~~~ivvlPl 126 (359)
T 3hcn_A 97 IGFRYVHPLTEEAIEEMERDGLERAIAFTQ 126 (359)
T ss_dssp EEESSSSSBHHHHHHHHHHTTCSEEEEEES
T ss_pred EEEeeCCCCHHHHHHHHHhcCCCeEEEEEC
Confidence 566778888999999999999999999874
No 402
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=23.98 E-value=2.5e+02 Score=21.55 Aligned_cols=70 Identities=10% Similarity=0.065 Sum_probs=39.8
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.+.+|.++ |.+|+++.-.+...++..++ +... .++..+..| -.|.+.+..++.++.++. ++|+|+.-.
T Consensus 20 ~~~a~~l~~~---G~~V~~~~r~~~~~~~~~~~-~~~~-~~~~~~~~D-~~~~~~~~~~~~~~~~~~~~id~li~~A 90 (251)
T 1zk4_A 20 LAIATKFVEE---GAKVMITGRHSDVGEKAAKS-VGTP-DQIQFFQHD-SSDEDGWTKLFDATEKAFGPVSTLVNNA 90 (251)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHH-HCCT-TTEEEEECC-TTCHHHHHHHHHHHHHHHSSCCEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEeCCHHHHHHHHHH-hhcc-CceEEEECC-CCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence 4556677765 46777665443322222222 2211 345555533 457777878887777765 489888644
No 403
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=23.98 E-value=1.8e+02 Score=23.34 Aligned_cols=70 Identities=9% Similarity=0.072 Sum_probs=38.5
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|++|+++ |.+|+++.-.+...++..+++ ... .++..+..| -.|.+.+..++.++.++. ..|+++.-.
T Consensus 35 ~aia~~La~~---G~~V~~~~r~~~~~~~~~~~~-~~~-~~~~~~~~D-v~d~~~v~~~~~~~~~~~g~iD~lvnnA 105 (272)
T 2nwq_A 35 EACARRFAEA---GWSLVLTGRREERLQALAGEL-SAK-TRVLPLTLD-VRDRAAMSAAVDNLPEEFATLRGLINNA 105 (272)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHHH-TTT-SCEEEEECC-TTCHHHHHHHHHTCCGGGSSCCEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEECCHHHHHHHHHHh-hcC-CcEEEEEcC-CCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence 3456777765 467776654433222222222 222 355555533 457777777776666554 479888654
No 404
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=23.88 E-value=1.5e+02 Score=19.01 Aligned_cols=13 Identities=8% Similarity=0.225 Sum_probs=6.2
Q ss_pred cCCCEEEEccccc
Q psy9408 77 ENPQLVILGKQSI 89 (219)
Q Consensus 77 ~~~dlVl~G~~s~ 89 (219)
..||+|++.....
T Consensus 44 ~~~dlii~d~~~~ 56 (119)
T 2j48_A 44 LQPIVILMAWPPP 56 (119)
T ss_dssp HCCSEEEEECSTT
T ss_pred cCCCEEEEecCCC
Confidence 3455555544433
No 405
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=23.88 E-value=1.7e+02 Score=24.47 Aligned_cols=11 Identities=0% Similarity=0.117 Sum_probs=7.0
Q ss_pred cCCCEEEEccc
Q psy9408 77 ENPQLVILGKQ 87 (219)
Q Consensus 77 ~~~dlVl~G~~ 87 (219)
.++|+|+.+..
T Consensus 61 ~~~d~v~~~~e 71 (380)
T 3ax6_A 61 KGSDVTTYDLE 71 (380)
T ss_dssp HTCSEEEESCS
T ss_pred hcCCEEEeccc
Confidence 35777776553
No 406
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}
Probab=23.85 E-value=1.6e+02 Score=25.29 Aligned_cols=45 Identities=27% Similarity=0.297 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHhc-----CCCEEEEcccccCCCcCcHHHHHHHHcCCCc
Q psy9408 64 LSVAKLLQVIVKKE-----NPQLVILGKQSIDSDNNQTGQMLAALLNWPQ 108 (219)
Q Consensus 64 ~~~A~~la~~ik~~-----~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~ 108 (219)
+-.+.++.+++++- +.|.|++|....++.+...+.+++.+||+|.
T Consensus 31 ~L~~~A~~~Al~~agl~~~~Id~v~~g~~~~~~~~~~~a~~i~~~lGl~~ 80 (394)
T 3ss6_A 31 ELAVPVLQEAVKRGGVEPHEVDEVILGHCIQRTDEANTARTAALAAGFPD 80 (394)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCCEEEEECSSCCGGGCSHHHHHHHHTTCCT
T ss_pred HHHHHHHHHHHHHcCCCHhHCCEEEEEEccCCCccchHHHHHHHHcCCCC
Confidence 33445555666553 4689999998877666779999999999974
No 407
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=23.83 E-value=1.1e+02 Score=20.35 Aligned_cols=16 Identities=19% Similarity=0.173 Sum_probs=7.4
Q ss_pred cCCCEEEEcccccCCC
Q psy9408 77 ENPQLVILGKQSIDSD 92 (219)
Q Consensus 77 ~~~dlVl~G~~s~d~~ 92 (219)
..||+|++.....+.+
T Consensus 46 ~~~dlvi~D~~l~~~~ 61 (123)
T 1xhf_A 46 YDINLVIMDINLPGKN 61 (123)
T ss_dssp SCCSEEEECSSCSSSC
T ss_pred CCCCEEEEcCCCCCCC
Confidence 3455555544443333
No 408
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=23.81 E-value=97 Score=25.83 Aligned_cols=15 Identities=47% Similarity=0.532 Sum_probs=7.7
Q ss_pred HHHHHhCCCCEEEEEe
Q psy9408 41 LQIAMAMGVDRAILIE 56 (219)
Q Consensus 41 lr~~~a~GaD~v~~v~ 56 (219)
++-+..+|+ +++.++
T Consensus 168 ~qla~~~Ga-~Vi~~~ 182 (346)
T 3fbg_A 168 TQIAKAYGL-RVITTA 182 (346)
T ss_dssp HHHHHHTTC-EEEEEC
T ss_pred HHHHHHcCC-EEEEEe
Confidence 444445666 555544
No 409
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=23.76 E-value=2.6e+02 Score=21.79 Aligned_cols=71 Identities=15% Similarity=0.199 Sum_probs=42.4
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcc-hHHHHHHHHhC-CCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKK-CKEILQIAMAM-GVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~-~~~~lr~~~a~-GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|.+|+++ |.+|+++.-.+.. .++..+++... |. ++..+..| -.|...+.+++.++.++. ++|+++.-.
T Consensus 18 ~~ia~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~D-~~~~~~v~~~~~~~~~~~g~iD~lv~~A 91 (260)
T 1x1t_A 18 LGIATALAAQ---GADIVLNGFGDAAEIEKVRAGLAAQHGV-KVLYDGAD-LSKGEAVRGLVDNAVRQMGRIDILVNNA 91 (260)
T ss_dssp HHHHHHHHHT---TCEEEEECCSCHHHHHHHHHHHHHHHTS-CEEEECCC-TTSHHHHHHHHHHHHHHHSCCSEEEECC
T ss_pred HHHHHHHHHc---CCEEEEEeCCcchHHHHHHHHHHhccCC-cEEEEECC-CCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 3556777775 4687766554433 33333333332 54 34444433 467788888888877775 589888654
No 410
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=23.74 E-value=2.5e+02 Score=21.60 Aligned_cols=64 Identities=14% Similarity=0.137 Sum_probs=43.7
Q ss_pred hHHHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc
Q psy9408 7 DEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE 77 (219)
Q Consensus 7 D~~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~ 77 (219)
|...++...+|++.. ....|+.++.-. ..+....++..|+|..+. . .+++......|..+++..
T Consensus 79 ~~~g~~~~~~lr~~~-~~~~ii~lt~~~--~~~~~~~~~~~Ga~~yl~-K---p~~~~~L~~~i~~~~~~~ 142 (250)
T 3r0j_A 79 GMDGFGVLRRLRADG-IDAPALFLTARD--SLQDKIAGLTLGGDDYVT-K---PFSLEEVVARLRVILRRA 142 (250)
T ss_dssp SSCHHHHHHHHHHTT-CCCCEEEEECST--THHHHHHHHTSTTCEEEE-S---SCCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhcC-CCCCEEEEECCC--CHHHHHHHHHcCCcEEEe-C---CCCHHHHHHHHHHHHHhh
Confidence 445677778888763 345666666443 356678899999986443 3 478888888888887654
No 411
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=23.73 E-value=36 Score=29.11 Aligned_cols=51 Identities=10% Similarity=0.193 Sum_probs=28.5
Q ss_pred HHHHHHHHhCCCCEEEEEecCC-CCCHHH-HHHHHHHHHHh-cCCCEEEEcccc
Q psy9408 38 KEILQIAMAMGVDRAILIETDT-ILQSLS-VAKLLQVIVKK-ENPQLVILGKQS 88 (219)
Q Consensus 38 ~~~lr~~~a~GaD~v~~v~~~~-~~d~~~-~A~~la~~ik~-~~~dlVl~G~~s 88 (219)
++.++++-+.|+|-+|++.+.. ..|... .+..-...+++ .+.|+||.|++-
T Consensus 191 ~~~v~~lr~~g~D~II~l~H~G~~~d~~~~~~en~~~~~~~v~gID~IlgGHsH 244 (339)
T 3jyf_A 191 RKYIPEMRAKGADVVVVVAHSGLSADPYQAMAENSVYYLSQVPGVDAIMFGHAH 244 (339)
T ss_dssp HHHHHHHHHTTCSEEEEEECCCCCCSCCCTTCSCCHHHHTTSTTCCEEEECSSC
T ss_pred HHHHHHHHhcCCCEEEEEeccCccccccccccchhHHHHhhCCCCCEEEeCCCc
Confidence 4455666678999999998643 112110 01000001222 478999999974
No 412
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=23.72 E-value=48 Score=30.12 Aligned_cols=46 Identities=17% Similarity=0.187 Sum_probs=32.3
Q ss_pred HHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcccceeE
Q psy9408 69 LLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASK 114 (219)
Q Consensus 69 ~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~~ 114 (219)
.+++.+++-+-=+|++|.........+.--.+|+++|+|+++...+
T Consensus 220 ~~~~~l~~a~rpvil~G~g~~~~~a~~~l~~lae~~~~Pv~~t~~~ 265 (570)
T 2vbf_A 220 KIEESLKNAQKPVVIAGHEVISFGLEKTVTQFVSETKLPITTLNFG 265 (570)
T ss_dssp HHHHHHHHCSSEEEEECHHHHHTTCHHHHHHHHHHHCCCEEECSTT
T ss_pred HHHHHHHcCCCCEEEECcCccccChHHHHHHHHHHHCCCEEECccc
Confidence 3444454444458889887765455677889999999999976543
No 413
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}
Probab=23.70 E-value=87 Score=26.94 Aligned_cols=52 Identities=13% Similarity=0.123 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHhc------CCCEEEEcccccCCC-cCcHHHHHHHHcCCCcccceeEE
Q psy9408 64 LSVAKLLQVIVKKE------NPQLVILGKQSIDSD-NNQTGQMLAALLNWPQATFASKI 115 (219)
Q Consensus 64 ~~~A~~la~~ik~~------~~dlVl~G~~s~d~~-~~~v~~~lA~~Lg~p~vt~v~~l 115 (219)
+-.+.++.+++++- +.|.|++|....++. +..++.+++.++|+|.-..+..+
T Consensus 29 ~L~~~a~~~Al~~a~gi~~~~Id~v~~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v 87 (387)
T 3goa_A 29 DLSAHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPHSVPAVTV 87 (387)
T ss_dssp HHHHHHHHHHHHHCTTSCGGGCCEEEEECSCCSBTTTTTHHHHHHHHTTCCTTSCCEEE
T ss_pred HHHHHHHHHHHHhccCCCHHHcCEEEEEcccCCcccccHHHHHHHHHcCCCCCCcEeEe
Confidence 33445555566544 368999998877664 56788899999999743333333
No 414
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=23.70 E-value=63 Score=26.55 Aligned_cols=41 Identities=15% Similarity=0.246 Sum_probs=26.8
Q ss_pred HHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCccc
Q psy9408 67 AKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQAT 110 (219)
Q Consensus 67 A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt 110 (219)
...+.+++++.+||+|++- +. ....-.+...|..+++|++.
T Consensus 84 ~~~l~~~l~~~~pDvv~~~-~~--~~~~~~~~~~~~~~~ip~v~ 124 (375)
T 3beo_A 84 LEGLDKVMKEAKPDIVLVH-GD--TTTTFIASLAAFYNQIPVGH 124 (375)
T ss_dssp HHHHHHHHHHHCCSEEEEE-TT--SHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHhCCCEEEEe-CC--chHHHHHHHHHHHHCCCEEE
Confidence 3447788888999999982 21 11122344667788999873
No 415
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=23.69 E-value=2.9e+02 Score=22.24 Aligned_cols=69 Identities=14% Similarity=0.181 Sum_probs=38.6
Q ss_pred HHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHH-hCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEccc
Q psy9408 12 ESAIRLRESSNKIKEIIAISCGNKKCKEILQIAM-AMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGKQ 87 (219)
Q Consensus 12 e~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~-a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~~ 87 (219)
+.|++|+++ |.+|+++.-... ..+.+++.. ..|. +..+..| -.|.+.+.+++.++.++. +.|+++.-..
T Consensus 47 ~ia~~la~~---G~~V~~~~r~~~-~~~~~~~~~~~~~~--~~~~~~D-v~d~~~v~~~~~~~~~~~g~iD~lVnnAG 117 (296)
T 3k31_A 47 GIAKAVCAQ---GAEVALTYLSET-FKKRVDPLAESLGV--KLTVPCD-VSDAESVDNMFKVLAEEWGSLDFVVHAVA 117 (296)
T ss_dssp HHHHHHHHT---TCEEEEEESSGG-GHHHHHHHHHHHTC--CEEEECC-TTCHHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred HHHHHHHHC---CCEEEEEeCChH-HHHHHHHHHHhcCC--eEEEEcC-CCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 456666664 356665554432 223333322 2332 2333322 467888888888887775 5898886543
No 416
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=23.69 E-value=2.7e+02 Score=21.97 Aligned_cols=68 Identities=12% Similarity=0.078 Sum_probs=38.7
Q ss_pred HHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEccc
Q psy9408 12 ESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGKQ 87 (219)
Q Consensus 12 e~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~~ 87 (219)
+.|++|+++ |.+|+.+.-.....++..++. |..-.++ ..| -.|...+.+.+.++.++. +.|+++.-..
T Consensus 26 aia~~l~~~---G~~V~~~~r~~~~~~~~~~~~---~~~~~~~-~~D-v~~~~~v~~~~~~~~~~~g~id~lv~nAg 94 (271)
T 3tzq_B 26 ETSRVLARA---GARVVLADLPETDLAGAAASV---GRGAVHH-VVD-LTNEVSVRALIDFTIDTFGRLDIVDNNAA 94 (271)
T ss_dssp HHHHHHHHT---TCEEEEEECTTSCHHHHHHHH---CTTCEEE-ECC-TTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHC---CCEEEEEcCCHHHHHHHHHHh---CCCeEEE-ECC-CCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 455666654 356666655544433333333 4332222 222 457777888888877776 5898887554
No 417
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=23.65 E-value=1.6e+02 Score=23.55 Aligned_cols=84 Identities=15% Similarity=0.105 Sum_probs=50.6
Q ss_pred cEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCC-C-----------------CCHHHHHHHHHHH-------------
Q psy9408 25 KEIIAISCGNKKCKEILQIAMAMGVDRAILIETDT-I-----------------LQSLSVAKLLQVI------------- 73 (219)
Q Consensus 25 ~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~-~-----------------~d~~~~A~~la~~------------- 73 (219)
.+|..+-.|+- ....++.+...|+.++.+++.+. . .-.++.++.|.+.
T Consensus 32 ~~VlVvG~Gg~-G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 110 (249)
T 1jw9_B 32 SRVLIVGLGGL-GCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL 110 (249)
T ss_dssp CEEEEECCSHH-HHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred CeEEEEeeCHH-HHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccC
Confidence 36666666543 25677888889999999998653 0 1122333333221
Q ss_pred ----HHh--cCCCEEEEcccccCCCcCcHHHHHHHHcCCCcccc
Q psy9408 74 ----VKK--ENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATF 111 (219)
Q Consensus 74 ----ik~--~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~ 111 (219)
+.+ .++|+|+....+. .++..-...+...+.|++..
T Consensus 111 ~~~~~~~~~~~~DvVi~~~d~~--~~~~~l~~~~~~~~~p~i~~ 152 (249)
T 1jw9_B 111 DDAELAALIAEHDLVLDCTDNV--AVRNQLNAGCFAAKVPLVSG 152 (249)
T ss_dssp CHHHHHHHHHTSSEEEECCSSH--HHHHHHHHHHHHHTCCEEEE
T ss_pred CHhHHHHHHhCCCEEEEeCCCH--HHHHHHHHHHHHcCCCEEEe
Confidence 001 1578888765332 35566677788889998863
No 418
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=23.59 E-value=2.4e+02 Score=23.95 Aligned_cols=85 Identities=13% Similarity=0.203 Sum_probs=53.2
Q ss_pred cEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCC----C------CCH----HHHHHHHHHHHHhc-------------
Q psy9408 25 KEIIAISCGNKKCKEILQIAMAMGVDRAILIETDT----I------LQS----LSVAKLLQVIVKKE------------- 77 (219)
Q Consensus 25 ~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~----~------~d~----~~~A~~la~~ik~~------------- 77 (219)
.+|..+-.|+-. -..++.+...|+-++.++++|. + ++. ..-+.++++.+++.
T Consensus 119 ~~VlvvG~GglG-s~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~i 197 (353)
T 3h5n_A 119 AKVVILGCGGIG-NHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIALNI 197 (353)
T ss_dssp CEEEEECCSHHH-HHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEECCC
T ss_pred CeEEEECCCHHH-HHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEeeccc
Confidence 578777777654 4678888899999999999763 0 110 11234444444332
Q ss_pred ----------CCCEEEEcccccCCCcCcHHHHHHHHcCCCcccc
Q psy9408 78 ----------NPQLVILGKQSIDSDNNQTGQMLAALLNWPQATF 111 (219)
Q Consensus 78 ----------~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~ 111 (219)
++|+|+...-... .++..-...+...+.|++..
T Consensus 198 ~~~~~~~~~~~~DlVvd~~Dn~~-~~r~~ln~~c~~~~~p~i~~ 240 (353)
T 3h5n_A 198 NDYTDLHKVPEADIWVVSADHPF-NLINWVNKYCVRANQPYINA 240 (353)
T ss_dssp CSGGGGGGSCCCSEEEECCCCST-THHHHHHHHHHHTTCCEEEE
T ss_pred CchhhhhHhccCCEEEEecCChH-HHHHHHHHHHHHhCCCEEEE
Confidence 4678776532211 14556667888999999854
No 419
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=23.48 E-value=1.5e+02 Score=29.84 Aligned_cols=92 Identities=12% Similarity=-0.032 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecC-------CCCCHHHHHHHHHHHHHhcCCC
Q psy9408 8 EIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETD-------TILQSLSVAKLLQVIVKKENPQ 80 (219)
Q Consensus 8 ~~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~-------~~~d~~~~A~~la~~ik~~~~d 80 (219)
+-|+..++.+++. |.+++++.--+. .......-+|+.|.+... ...+.+.-...|.+++++.++|
T Consensus 24 eia~riiraa~el---Gi~vvav~s~~d-----~~a~~~~~ADe~~~i~~~~~~~~~~~~~~~yld~~~I~~~a~~~~iD 95 (1165)
T 2qf7_A 24 EIAIRVFRAANEL---GIKTVAIWAEED-----KLALHRFKADESYQVGRGPHLARDLGPIESYLSIDEVIRVAKLSGAD 95 (1165)
T ss_dssp HHHHHHHHHHHHT---TCEEEEEECGGG-----TTCHHHHSSSSEEECSCSTTSSSCCCTTHHHHCHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHc---CCEEEEEECCCc-----ccchhHHhCCEEEEcCCcccccccCCccccccCHHHHHHHHHHhCCC
Q ss_pred EEEEcccccCCCcCcHHHHHHHHcCCCcc
Q psy9408 81 LVILGKQSIDSDNNQTGQMLAALLNWPQA 109 (219)
Q Consensus 81 lVl~G~~s~d~~~~~v~~~lA~~Lg~p~v 109 (219)
+|+.|......+. --+...+.+|+|++
T Consensus 96 ~V~pg~g~lsE~~--~~a~~le~~Gi~~i 122 (1165)
T 2qf7_A 96 AIHPGYGLLSESP--EFVDACNKAGIIFI 122 (1165)
T ss_dssp EEECCSSTTTTCH--HHHHHHHHTTCEES
T ss_pred EEEECCCchhcCH--HHHHHHHHcCCceE
No 420
>1p2f_A Response regulator; DRRB, OMPR/PHOB, transcription; HET: MSE; 1.80A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nns_A*
Probab=23.48 E-value=2.3e+02 Score=21.11 Aligned_cols=64 Identities=11% Similarity=0.098 Sum_probs=43.5
Q ss_pred HHHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcC
Q psy9408 8 EIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKEN 78 (219)
Q Consensus 8 ~~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~ 78 (219)
...++...++++.. +...|+.++--. ..+....++..|++..+. . .+++......|..+++...
T Consensus 56 ~~g~~~~~~lr~~~-~~~~ii~lt~~~--~~~~~~~~~~~ga~~~l~-K---p~~~~~L~~~i~~~~~~~~ 119 (220)
T 1p2f_A 56 YSGYEICRMIKETR-PETWVILLTLLS--DDESVLKGFEAGADDYVT-K---PFNPEILLARVKRFLEREK 119 (220)
T ss_dssp SBHHHHHHHHHHHC-TTSEEEEEESCC--SHHHHHHHHHHTCSEEEE-S---SCCHHHHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHhcC-CCCcEEEEEcCC--CHHHHHHHHHcCCCEEEE-C---CCCHHHHHHHHHHHHcccc
Confidence 34567777787763 345777666443 256678889999997443 3 4678888888888877643
No 421
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=23.45 E-value=2.5e+02 Score=21.44 Aligned_cols=71 Identities=11% Similarity=0.130 Sum_probs=41.7
Q ss_pred HHHHHHhhhhcCCCcEEEEE-EecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAI-SCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av-~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
...|.+|.++ |.+|+++ .-.+...++..+++-..|.+ +..+..| -.|+..+..++.++.++. ++|+|+.-.
T Consensus 19 ~~~a~~l~~~---G~~V~~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D-~~~~~~~~~~~~~~~~~~~~~d~vi~~A 91 (247)
T 2hq1_A 19 KAIAWKLGNM---GANIVLNGSPASTSLDATAEEFKAAGIN-VVVAKGD-VKNPEDVENMVKTAMDAFGRIDILVNNA 91 (247)
T ss_dssp HHHHHHHHHT---TCEEEEEECTTCSHHHHHHHHHHHTTCC-EEEEESC-TTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEcCcCHHHHHHHHHHHHhcCCc-EEEEECC-CCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 3456677765 4677766 22333334444444445544 4444433 457777778777777665 589888644
No 422
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=23.44 E-value=48 Score=30.14 Aligned_cols=46 Identities=11% Similarity=0.017 Sum_probs=31.5
Q ss_pred HHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcccceeE
Q psy9408 69 LLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASK 114 (219)
Q Consensus 69 ~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~~ 114 (219)
.+++.+++-+-=+|++|......+..+---.+|+++|+|+++...+
T Consensus 214 ~~~~~l~~a~rpvIl~G~g~~~~~a~~~l~~lae~~~~Pv~~t~~~ 259 (565)
T 2nxw_A 214 EVLAAMRSATSPVLMVCVEVRRYGLEAKVAELAQRLGVPVVTTFMG 259 (565)
T ss_dssp HHHHHHHHCSSEEEEECHHHHHTTCHHHHHHHHHHHCSCEEECGGG
T ss_pred HHHHHHHcCCCCEEEECCCcchhchHHHHHHHHHHhCCCEEECccc
Confidence 3444555545558888876543344567789999999999876544
No 423
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=23.43 E-value=1.1e+02 Score=25.67 Aligned_cols=17 Identities=18% Similarity=0.292 Sum_probs=10.5
Q ss_pred HHHHHHhCCCCEEEEEe
Q psy9408 40 ILQIAMAMGVDRAILIE 56 (219)
Q Consensus 40 ~lr~~~a~GaD~v~~v~ 56 (219)
.++-|.++|+.+++.++
T Consensus 208 a~qla~~~Ga~~Vi~~~ 224 (374)
T 1cdo_A 208 AVMGCHSAGAKRIIAVD 224 (374)
T ss_dssp HHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHcCCCEEEEEc
Confidence 44555667777666654
No 424
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens}
Probab=23.39 E-value=61 Score=28.76 Aligned_cols=51 Identities=14% Similarity=0.124 Sum_probs=36.8
Q ss_pred HHHHHHHHHhc-----CCCEEEEcccccCCCcCcHHHHHHHHcCCCcccceeEEEE
Q psy9408 67 AKLLQVIVKKE-----NPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASKIVL 117 (219)
Q Consensus 67 A~~la~~ik~~-----~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~~l~~ 117 (219)
+.+..+++++. +.|+|+++.+|.+.....++..+..+||.+-.+++..+++
T Consensus 59 ~~Aa~~al~~a~i~~~~Id~ii~aT~t~~~~~ps~a~~v~~~l~~~g~~~~~a~D~ 114 (460)
T 2wya_A 59 LTVVQRLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDT 114 (460)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTGGGTCCCCBCCEE
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCchHHHHHHHHhccCCCCeeEech
Confidence 33444455443 3579999998888888999999999998776666655554
No 425
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=23.39 E-value=1.8e+02 Score=19.68 Aligned_cols=60 Identities=10% Similarity=0.039 Sum_probs=36.0
Q ss_pred HHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHH
Q psy9408 9 IAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVK 75 (219)
Q Consensus 9 ~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik 75 (219)
..++...++++.. ....++.++--. ..+....++..|++..+. . .++.......|..+++
T Consensus 61 ~g~~~~~~l~~~~-~~~~ii~~s~~~--~~~~~~~~~~~ga~~~l~-K---P~~~~~L~~~i~~~~~ 120 (132)
T 3crn_A 61 EGTELLEKAHKLR-PGMKKIMVTGYA--SLENSVFSLNAGADAYIM-K---PVNPRDLLEKIKEKLD 120 (132)
T ss_dssp BHHHHHHHHHHHC-TTSEEEEEESCC--CHHHHHHHHHTTCSEEEE-S---SCCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHhhC-CCCcEEEEeccc--cHHHHHHHHhccchhhcc-C---CCCHHHHHHHHHHHHh
Confidence 3456666776653 234565555332 245667788899986443 2 4667776676666654
No 426
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}
Probab=23.37 E-value=1.8e+02 Score=29.59 Aligned_cols=71 Identities=17% Similarity=0.151 Sum_probs=37.0
Q ss_pred HHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEccc
Q psy9408 9 IAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQ 87 (219)
Q Consensus 9 ~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~ 87 (219)
.++..++.+++. |.+++++.--+.......+ -+|+.+.+......+.+.-...|.+++++.++|+|+.|..
T Consensus 42 ia~~iiraar~l---Gi~vVaV~s~~d~~a~~~~-----~ADe~~~i~p~~~~~syld~~~Il~~a~~~~iDaI~pg~g 112 (1236)
T 3va7_A 42 IAVRIMKTLKRM---GIKSVAVYSDPDKYSQHVT-----DADFSVALHGRTAAETYLDIDKIINAAKKTGAQAIIPGYG 112 (1236)
T ss_dssp HHHHHHHHHHHH---TCEEEEEECSGGGGCHHHH-----HSSEEEECCCSSTTTTTTCHHHHHHHHHHTTCSEEECCSS
T ss_pred HHHHHHHHHHHC---CCEEEEEEcCCCcCchhhh-----hCCEEEEeCCCcccccccCHHHHHHHHHHhCCCEEEECCc
Confidence 355555555543 3666665433221001111 2678777743221122222356677788889999997653
No 427
>1lbq_A Ferrochelatase; rossmann fold, PI-helix, lyase; 2.40A {Saccharomyces cerevisiae} SCOP: c.92.1.1 PDB: 1l8x_A
Probab=23.36 E-value=1.4e+02 Score=25.68 Aligned_cols=53 Identities=13% Similarity=0.165 Sum_probs=39.8
Q ss_pred CHhhHHHHHHHHHhhhhcCCC--cEEEEEE-ecC-----cchHHHHHHHHhCCCCEEEEEec
Q psy9408 4 NPFDEIAIESAIRLRESSNKI--KEIIAIS-CGN-----KKCKEILQIAMAMGVDRAILIET 57 (219)
Q Consensus 4 Np~D~~Ale~A~~l~e~~g~g--~~V~av~-~G~-----~~~~~~lr~~~a~GaD~v~~v~~ 57 (219)
+||-.+.-+.++.|++++|.+ ..++=-| +|+ +..++.++++ +.|+.+++++.-
T Consensus 215 DpY~~q~~~ta~ll~e~lg~~~~~~~~fQSr~G~~~WL~P~t~~~l~~L-~~G~k~vvVvP~ 275 (362)
T 1lbq_A 215 DAYPAEVAATVYNIMQKLKFKNPYRLVWQSQVGPKPWLGAQTAEIAEFL-GPKVDGLMFIPI 275 (362)
T ss_dssp CSHHHHHHHHHHHHHHHTTTCSCEEEEEECCCSSSCBCSCBHHHHHHHH-GGGCSCEEEECT
T ss_pred CcHHHHHHHHHHHHHHHcCCCCCEEEEEECCCCCcccCCCCHHHHHHHH-HcCCCeEEEECC
Confidence 678888889999999998522 1233233 563 5688999999 999999999873
No 428
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=23.33 E-value=63 Score=29.11 Aligned_cols=46 Identities=7% Similarity=-0.064 Sum_probs=32.3
Q ss_pred HHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcccceeE
Q psy9408 69 LLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASK 114 (219)
Q Consensus 69 ~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~~ 114 (219)
.+++.+++-+-=+|++|......+..+.--.+|+++|+|+++...+
T Consensus 201 ~~~~~l~~a~rpvil~G~g~~~~~a~~~l~~lae~~~~Pv~~t~~~ 246 (552)
T 1ovm_A 201 AAENKLAMSKRTALLADFLVLRHGLKHALQKWVKEVPMAHATMLMG 246 (552)
T ss_dssp HHHHHHHTCSCEEEEECHHHHHTTCHHHHHHHHHHSCCEEEECGGG
T ss_pred HHHHHHHhCCCCEEEECcCccccCHHHHHHHHHHHHCCCEEEcccc
Confidence 3444555544458889987754455667789999999999876553
No 429
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=23.31 E-value=56 Score=26.05 Aligned_cols=27 Identities=11% Similarity=0.174 Sum_probs=14.1
Q ss_pred cCCCEEEEcccccCCCcCcHHHHHHHHcC
Q psy9408 77 ENPQLVILGKQSIDSDNNQTGQMLAALLN 105 (219)
Q Consensus 77 ~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg 105 (219)
.+.|.|++|..... .-++...++..+|
T Consensus 100 ~Gad~V~ig~~~l~--dp~~~~~~~~~~g 126 (247)
T 3tdn_A 100 RGADKVSINTAAVE--NPSLITQIAQTFG 126 (247)
T ss_dssp TTCSEECCSHHHHH--CTHHHHHHHHHHC
T ss_pred cCCCeeehhhHHhh--ChHHHHHHHHHhC
Confidence 35666666665542 1234455555555
No 430
>3i09_A Periplasmic branched-chain amino acid-binding Pro; type I periplasmic binding protein, structural genomics, JOI for structural genomics; HET: MSE CIT; 1.80A {Burkholderia mallei}
Probab=23.31 E-value=87 Score=25.87 Aligned_cols=50 Identities=12% Similarity=-0.017 Sum_probs=35.2
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcccc
Q psy9408 59 TILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATF 111 (219)
Q Consensus 59 ~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~ 111 (219)
...|+......+.+++.+.+.+.|+.+..|.. ..-...++...++|+++.
T Consensus 52 ~~~~~~~a~~~~~~li~~~~v~~iiG~~~s~~---~~a~~~~~~~~~ip~i~~ 101 (375)
T 3i09_A 52 HQNKADIAASKAREWMDRGGLDLLVGGTNSAT---ALSMNQVAAEKKKVYINI 101 (375)
T ss_dssp CTTCHHHHHHHHHHHHHHSCEEEEEECSCHHH---HHHHHHHHHHHTCEEEEC
T ss_pred CCCCHHHHHHHHHHHHhhCCCEEEECCCCcHH---HHHHHHHHHHcCceEEEe
Confidence 35788888888888888788888876655421 223345677789998875
No 431
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*
Probab=23.21 E-value=56 Score=29.66 Aligned_cols=46 Identities=15% Similarity=0.252 Sum_probs=30.2
Q ss_pred HHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEccccc
Q psy9408 38 KEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQSI 89 (219)
Q Consensus 38 ~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~ 89 (219)
++.++++-+.|+|-+|++.+.. ++. -..||+.+ .+.|+||.|++-.
T Consensus 198 ~~~v~~l~~~g~D~iI~l~H~g-~~~---d~~la~~~--~giDlIlgGHtH~ 243 (546)
T 4h2g_A 198 QPEVDKLKTLNVNKIIALGHSG-FEM---DKLIAQKV--RGVDVVVGGHSNT 243 (546)
T ss_dssp HHHHHHHHHTTCCCEEEEEESC-HHH---HHHHHHHS--TTCCEEECCSSCC
T ss_pred HHHHHHHHhcCCCEEEEEeccC-ccc---hHHHHHhC--CCCcEEEeCCcCc
Confidence 3455566667999999999643 221 23444433 3699999999853
No 432
>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A*
Probab=23.20 E-value=61 Score=24.51 Aligned_cols=41 Identities=20% Similarity=0.039 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHhcC---CCEEEEcccccCCCcCcHHHHHHHHcCCCcc
Q psy9408 65 SVAKLLQVIVKKEN---PQLVILGKQSIDSDNNQTGQMLAALLNWPQA 109 (219)
Q Consensus 65 ~~A~~la~~ik~~~---~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~v 109 (219)
..++.|++.++..+ +|+|+.-. ..+-.++..+|..||+|++
T Consensus 41 ~la~~l~~~~~~~~~~~~d~vv~v~----~~G~~~a~~la~~l~~p~~ 84 (180)
T 1zn8_A 41 AAIGLLARHLKATHGGRIDYIAGLD----SRGFLFGPSLAQELGLGCV 84 (180)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEEET----TTHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEEC----CCchHHHHHHHHHhCCCEE
Confidence 45666666665433 78777543 2345799999999999975
No 433
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=23.19 E-value=1.6e+02 Score=20.67 Aligned_cols=65 Identities=9% Similarity=0.081 Sum_probs=41.6
Q ss_pred hHHHHHHHHHhhhhcC-CCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc
Q psy9408 7 DEIAIESAIRLRESSN-KIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE 77 (219)
Q Consensus 7 D~~Ale~A~~l~e~~g-~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~ 77 (219)
+...++...+|++... ....+++++-.. ..+....++..|++..+. . .++.......|..+++..
T Consensus 63 ~~~g~~~~~~lr~~~~~~~~pii~~s~~~--~~~~~~~~~~~g~~~~l~-K---P~~~~~l~~~i~~~l~~~ 128 (154)
T 3gt7_A 63 EMDGYALCRWLKGQPDLRTIPVILLTILS--DPRDVVRSLECGADDFIT-K---PCKDVVLASHVKRLLSGV 128 (154)
T ss_dssp SSCHHHHHHHHHHSTTTTTSCEEEEECCC--SHHHHHHHHHHCCSEEEE-S---SCCHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHhCCCcCCCCEEEEECCC--ChHHHHHHHHCCCCEEEe-C---CCCHHHHHHHHHHHHHHH
Confidence 3445666777776421 134566555332 356678889999987443 2 478888888888887654
No 434
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=23.16 E-value=73 Score=29.19 Aligned_cols=50 Identities=14% Similarity=0.154 Sum_probs=33.5
Q ss_pred CHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcccceeE
Q psy9408 62 QSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASK 114 (219)
Q Consensus 62 d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~~ 114 (219)
++..+.+ +++.+++-+-=+|++|.... +..+---.+|+++|+|+++....
T Consensus 198 ~~~~i~~-~~~~l~~A~rPvIl~G~g~~--~a~~~l~~lae~~~~PV~~t~~g 247 (603)
T 4feg_A 198 DVQAVTR-LTQTLLAAERPLIYYGIGAR--KAGKELEQLSKTLKIPLMSTYPA 247 (603)
T ss_dssp CHHHHHH-HHHHHHHCSSEEEEECGGGT--TCHHHHHHHHHHHTCCEEECGGG
T ss_pred CHHHHHH-HHHHHhcCCCeEEEECCCch--hHHHHHHHHHHHHCCCEEEcCcc
Confidence 4444433 44455554555888888762 34566789999999999987544
No 435
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=23.03 E-value=2.6e+02 Score=22.64 Aligned_cols=61 Identities=8% Similarity=0.059 Sum_probs=39.6
Q ss_pred hCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-----CCCEEEEcccccCCCcCcHHHHHHHHcCCC
Q psy9408 46 AMGVDRAILIETDTILQSLSVAKLLQVIVKKE-----NPQLVILGKQSIDSDNNQTGQMLAALLNWP 107 (219)
Q Consensus 46 a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-----~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p 107 (219)
..|.++-.....+ ....+-...+..+++++- +.|.|++|..+.+.....++.+++.+||++
T Consensus 36 ~~Gi~~r~~~~~~-~~~~~l~~~a~~~al~~ag~~~~~id~vi~g~~~~~~~~~~~a~~v~~~lgl~ 101 (317)
T 1hnj_A 36 RTGIRERHIAAPN-ETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIK 101 (317)
T ss_dssp HHCCCEEEECCTT-CCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHTCC
T ss_pred HhCceEEEecCCC-CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCC
Confidence 5688887765422 222333344444555442 467899998876655567899999999987
No 436
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=22.97 E-value=2.6e+02 Score=21.55 Aligned_cols=68 Identities=18% Similarity=0.136 Sum_probs=40.2
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|++|+++ |.+|+++.-.....++..++. +. ++..+..| -.|.+.+..++.++.++. ..|+++.-.
T Consensus 17 ~a~a~~l~~~---G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~D-~~~~~~v~~~~~~~~~~~g~id~lvnnA 85 (235)
T 3l6e_A 17 RALTIGLVER---GHQVSMMGRRYQRLQQQELLL---GN-AVIGIVAD-LAHHEDVDVAFAAAVEWGGLPELVLHCA 85 (235)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHHH---GG-GEEEEECC-TTSHHHHHHHHHHHHHHHCSCSEEEEEC
T ss_pred HHHHHHHHHC---CCEEEEEECCHHHHHHHHHHh---cC-CceEEECC-CCCHHHHHHHHHHHHHhcCCCcEEEECC
Confidence 4567777765 467776654433323322222 22 35555533 567888888888877765 479888544
No 437
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=22.81 E-value=1.3e+02 Score=25.13 Aligned_cols=13 Identities=15% Similarity=0.235 Sum_probs=7.4
Q ss_pred echHHHHHHHHhh
Q psy9408 202 VKNVIELIDKLKN 214 (219)
Q Consensus 202 ~~~~~~l~~~L~~ 214 (219)
++.+.+.++.|++
T Consensus 330 l~~~~~A~~~l~~ 342 (353)
T 4dup_A 330 FEDVADAHRLLEE 342 (353)
T ss_dssp GGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 3456666666654
No 438
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=22.76 E-value=1.7e+02 Score=19.23 Aligned_cols=60 Identities=15% Similarity=0.145 Sum_probs=34.0
Q ss_pred HHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHh
Q psy9408 9 IAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKK 76 (219)
Q Consensus 9 ~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~ 76 (219)
..++...++++. ....++.++-.. ..+....++..|++..+. . .++.......|..+++.
T Consensus 60 ~g~~~~~~l~~~--~~~~ii~~s~~~--~~~~~~~~~~~ga~~~l~-K---p~~~~~l~~~i~~~~~~ 119 (122)
T 1zgz_A 60 NGLMLTRALRER--STVGIILVTGRS--DRIDRIVGLEMGADDYVT-K---PLELRELVVRVKNLLWR 119 (122)
T ss_dssp CHHHHHHHHHTT--CCCEEEEEESSC--CHHHHHHHHHHTCSEEEE-S---SCCHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHhc--CCCCEEEEECCC--ChhhHHHHHHhCHHHHcc-C---CCCHHHHHHHHHHHHHH
Confidence 345666667652 234555554332 245566788888886433 3 35666666666665543
No 439
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=22.74 E-value=91 Score=25.26 Aligned_cols=31 Identities=13% Similarity=0.157 Sum_probs=14.0
Q ss_pred CCCEEEEcccccCCCcCcHHHHHHHHcCCCcc
Q psy9408 78 NPQLVILGKQSIDSDNNQTGQMLAALLNWPQA 109 (219)
Q Consensus 78 ~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~v 109 (219)
++|+|+.+.....+..+.+ ..+.+.+|+|++
T Consensus 55 ~~D~v~~~~~~~~ge~~~~-~~~le~~gi~~~ 85 (307)
T 3r5x_A 55 DIDFALLALHGKYGEDGTV-QGTLESLGIPYS 85 (307)
T ss_dssp TCSEEEECCCSHHHHSSHH-HHHHHHHTCCBS
T ss_pred CCCEEEEeCCCCCCcHHHH-HHHHHHcCCCee
Confidence 5666666543321111222 334455566654
No 440
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=22.74 E-value=2.9e+02 Score=21.92 Aligned_cols=72 Identities=18% Similarity=0.315 Sum_probs=40.2
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEccc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGKQ 87 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~~ 87 (219)
.+.|.+|.++ |.+|+++.-.+...++..+++...|.+ +..+..| -.|.+.+.+++.++.++. ++|+|+.-..
T Consensus 58 ~~la~~L~~~---G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~D-l~d~~~v~~~~~~~~~~~~~id~li~~Ag 130 (285)
T 2c07_A 58 REIAKMLAKS---VSHVICISRTQKSCDSVVDEIKSFGYE-SSGYAGD-VSKKEEISEVINKILTEHKNVDILVNNAG 130 (285)
T ss_dssp HHHHHHHTTT---SSEEEEEESSHHHHHHHHHHHHTTTCC-EEEEECC-TTCHHHHHHHHHHHHHHCSCCCEEEECCC
T ss_pred HHHHHHHHHc---CCEEEEEcCCHHHHHHHHHHHHhcCCc-eeEEECC-CCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 3455666654 467776432322233333444444554 4444433 457778888887777765 5898886543
No 441
>1tjn_A Sirohydrochlorin cobaltochelatase; AF0721, APC5049, midwest consortium for structural genomics, structure initiative, A. fulgidus; 2.01A {Archaeoglobus fulgidus} SCOP: c.92.1.3
Probab=22.69 E-value=2.3e+02 Score=20.87 Aligned_cols=44 Identities=14% Similarity=0.108 Sum_probs=28.7
Q ss_pred HHHHHHHHhhhhcCCCcEEEEEEe---cCcchHHHHHHHHhCCCCEEEEEe
Q psy9408 9 IAIESAIRLRESSNKIKEIIAISC---GNKKCKEILQIAMAMGVDRAILIE 56 (219)
Q Consensus 9 ~Ale~A~~l~e~~g~g~~V~av~~---G~~~~~~~lr~~~a~GaD~v~~v~ 56 (219)
..-..+.+|++..+ ...|..-++ +.+..++.++++ |+++++++.
T Consensus 42 ~~~~la~~l~~~~~-~~~V~~afle~~~~Psl~~~l~~l---G~~~VvVvP 88 (156)
T 1tjn_A 42 VMELHRKRIEESGA-FDEVKIAFAARKRRPMPDEAIREM---NCDIIYVVP 88 (156)
T ss_dssp HHHHHHHHHHHHTS-SSEEEEEECSSSCSSCHHHHHHHC---CCSEEEEEE
T ss_pred HHHHHHHHHHhhCC-CCeEEEEEecCCCCCCHHHHHHHc---CCCEEEEEe
Confidence 34455667777642 345543333 566677777777 999999987
No 442
>2qv5_A AGR_C_5032P, uncharacterized protein ATU2773; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Agrobacterium tumefaciens str}
Probab=22.49 E-value=1.4e+02 Score=24.59 Aligned_cols=29 Identities=21% Similarity=0.174 Sum_probs=22.2
Q ss_pred CEEEEcccccCCCcCcHHHHHHHHcCCCcccc
Q psy9408 80 QLVILGKQSIDSDNNQTGQMLAALLNWPQATF 111 (219)
Q Consensus 80 dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~ 111 (219)
.++|+-..++. ..+++.+|..+|+|++..
T Consensus 155 gL~FlDS~Ts~---~S~a~~~A~~~gvp~~~r 183 (261)
T 2qv5_A 155 GLLFLDDGSSA---QSLSGGIAKAISAPQGFA 183 (261)
T ss_dssp TCEEEECSCCT---TCCHHHHHHHHTCCEEEC
T ss_pred CCEEEcCCCCc---ccHHHHHHHHcCCCeEEe
Confidence 57777665543 459999999999998853
No 443
>2y7e_A 3-keto-5-aminohexanoate cleavage enzyme; lyase, aldolase; 1.28A {Candidatus cloacamonas acidaminovoransorganism_taxid} PDB: 2y7d_A 2y7f_A* 2y7g_A
Probab=22.45 E-value=67 Score=26.94 Aligned_cols=53 Identities=9% Similarity=0.107 Sum_probs=37.5
Q ss_pred CcchHHHHHHHHhCCCCEEE-EEecCC---CCCHHHHHHHHHHHHHhcCCCEEEEccc
Q psy9408 34 NKKCKEILQIAMAMGVDRAI-LIETDT---ILQSLSVAKLLQVIVKKENPQLVILGKQ 87 (219)
Q Consensus 34 ~~~~~~~lr~~~a~GaD~v~-~v~~~~---~~d~~~~A~~la~~ik~~~~dlVl~G~~ 87 (219)
+++..+...+|...||.-+. ++-|+. ..|++.|.+++. .|++..||+|+--.|
T Consensus 33 peEia~~A~~a~~AGAaivHlHvRd~~G~ps~d~~~~~e~~~-~IR~~~pd~ii~~TT 89 (282)
T 2y7e_A 33 PEEQAKEAKACFEAGARVIHLHIREDDGRPSQRLDRFQEAIS-AIREVVPEIIIQIST 89 (282)
T ss_dssp HHHHHHHHHHHHHHTEEEEEECEECTTSCEECCHHHHHHHHH-HHHHHCTTSEEEECS
T ss_pred HHHHHHHHHHHHHcCCcEEEEeecCCCCCcCCCHHHHHHHHH-HHHHHCCCeEEEeCC
Confidence 33444567788889998664 455432 469999999995 566668899986665
No 444
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=22.43 E-value=2.9e+02 Score=21.87 Aligned_cols=70 Identities=13% Similarity=0.077 Sum_probs=40.1
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEccc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGKQ 87 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~~ 87 (219)
.+.|++|+++ |.+|+.+.-.. .++.++++...+.+ +..+..| -.|.+.+.+.+.++.++. .+|+++.-..
T Consensus 42 ~~ia~~l~~~---G~~V~~~~r~~--~~~~~~~l~~~~~~-~~~~~~D-l~~~~~v~~~~~~~~~~~g~id~li~nAg 112 (280)
T 3nrc_A 42 YGIAKAMHRE---GAELAFTYVGQ--FKDRVEKLCAEFNP-AAVLPCD-VISDQEIKDLFVELGKVWDGLDAIVHSIA 112 (280)
T ss_dssp HHHHHHHHHT---TCEEEEEECTT--CHHHHHHHHGGGCC-SEEEECC-TTCHHHHHHHHHHHHHHCSSCCEEEECCC
T ss_pred HHHHHHHHHc---CCEEEEeeCch--HHHHHHHHHHhcCC-ceEEEee-cCCHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence 3456666654 35666655554 23445555443332 3333322 457778888888877775 5898886543
No 445
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=22.39 E-value=1.8e+02 Score=19.44 Aligned_cols=63 Identities=10% Similarity=0.061 Sum_probs=38.6
Q ss_pred HHHHHHHHHhhhhcC-CCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHh
Q psy9408 8 EIAIESAIRLRESSN-KIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKK 76 (219)
Q Consensus 8 ~~Ale~A~~l~e~~g-~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~ 76 (219)
...++...+|++... ....+++++-.. ..+....++..|++..+. . .++.......|..+++.
T Consensus 68 ~~g~~~~~~l~~~~~~~~~pii~ls~~~--~~~~~~~~~~~g~~~~l~-k---P~~~~~l~~~i~~~~~~ 131 (140)
T 1k68_A 68 KDGREVLAEIKSDPTLKRIPVVVLSTSI--NEDDIFHSYDLHVNCYIT-K---SANLSQLFQIVKGIEEF 131 (140)
T ss_dssp SCHHHHHHHHHHSTTGGGSCEEEEESCC--CHHHHHHHHHTTCSEEEE-C---CSSHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHcCcccccccEEEEecCC--cHHHHHHHHHhchhheec-C---CCCHHHHHHHHHHHHHH
Confidence 345666777776421 124555555332 356677888999997543 2 46777777777776654
No 446
>2fts_A Gephyrin; gephyrin, neuroreceptor anchoring, structu protein; 2.41A {Rattus norvegicus} SCOP: b.85.6.1 b.103.1.1 c.57.1.2 PDB: 2fu3_A 1t3e_A
Probab=22.38 E-value=3.9e+02 Score=23.30 Aligned_cols=102 Identities=15% Similarity=0.103 Sum_probs=56.9
Q ss_pred CCCHhhHHHHHHHHHhhhhc-CCCcEEEEEEecCcch---------------HHHHHH-HHhCCCCEEEEEecCCCCCHH
Q psy9408 2 SINPFDEIAIESAIRLRESS-NKIKEIIAISCGNKKC---------------KEILQI-AMAMGVDRAILIETDTILQSL 64 (219)
Q Consensus 2 ~iNp~D~~Ale~A~~l~e~~-g~g~~V~av~~G~~~~---------------~~~lr~-~~a~GaD~v~~v~~~~~~d~~ 64 (219)
+|+|.+.-+|.. .-+.+-. -.--+|..++.|.+-. -..+.. +..+|++-..+--- .-|.+
T Consensus 159 ~l~p~~iglLas-~G~~~v~V~~~prv~IistGdEl~~~g~~~~~G~i~dsN~~~L~~~l~~~G~~v~~~~iv--~Dd~~ 235 (419)
T 2fts_A 159 HMGPSEIGLLAT-VGVTEVEVNKFPVVAVMSTGNELLNPEDDLLPGKIRDSNRSTLLATIQEHGYPTINLGIV--GDNPD 235 (419)
T ss_dssp BCCHHHHHHHHH-HTCCEEEEECCCCEEEEEECTTEECTTSCCCTTCEECCHHHHHHHHHHTTTCCEEEEEEE--CSSHH
T ss_pred CcCHHHHHHHHh-CCCCeeEecCCCEEEEEEechhccCCCCCCCCCcEecCchHHHHHHHHHCCCEEEEEeec--CCCHH
Confidence 578888766633 2222110 0012577788887521 124444 44689876543221 23567
Q ss_pred HHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCc
Q psy9408 65 SVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQ 108 (219)
Q Consensus 65 ~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~ 108 (219)
.+.++|.+++++ .|+|++...++-++.-.+...++..+|...
T Consensus 236 ~i~~~l~~a~~~--~DlVittGG~s~g~~D~t~~al~~~lg~~~ 277 (419)
T 2fts_A 236 DLLNALNEGISR--ADVIITSGGVSMGEKDYLKQVLDIDLHAQI 277 (419)
T ss_dssp HHHHHHHHHHHH--CSEEEEESCCSSSCCHHHHHHHHTTTCCEE
T ss_pred HHHHHHHHHHhc--CCEEEEcCCCcCCCcccHHHHHHHHcCCce
Confidence 888888888764 787766444433343445555557777543
No 447
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=22.18 E-value=2.8e+02 Score=21.54 Aligned_cols=79 Identities=19% Similarity=0.081 Sum_probs=48.8
Q ss_pred CCHhhHHHHHHHHHhhhhcCCCcEEEEEEecCcc--hHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCC
Q psy9408 3 INPFDEIAIESAIRLRESSNKIKEIIAISCGNKK--CKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQ 80 (219)
Q Consensus 3 iNp~D~~Ale~A~~l~e~~g~g~~V~av~~G~~~--~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~d 80 (219)
-|||-...+....+.+++. |.++.....+... ..+.++.+.+.++|-+++.. .++......+..+ ++.+.-
T Consensus 16 ~~~~~~~~~~gi~~~a~~~--g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~----~~~~~~~~~~~~~-~~~~iP 88 (291)
T 3l49_A 16 DHDWDLKAYQAQIAEIERL--GGTAIALDAGRNDQTQVSQIQTLIAQKPDAIIEQL----GNLDVLNPWLQKI-NDAGIP 88 (291)
T ss_dssp SSHHHHHHHHHHHHHHHHT--TCEEEEEECTTCHHHHHHHHHHHHHHCCSEEEEES----SCHHHHHHHHHHH-HHTTCC
T ss_pred CChHHHHHHHHHHHHHHHc--CCEEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEeC----CChhhhHHHHHHH-HHCCCc
Confidence 3777777777777777776 4677666555432 23467888889999887654 2333344444444 334555
Q ss_pred EEEEcccc
Q psy9408 81 LVILGKQS 88 (219)
Q Consensus 81 lVl~G~~s 88 (219)
+|+++...
T Consensus 89 vV~~~~~~ 96 (291)
T 3l49_A 89 LFTVDTAT 96 (291)
T ss_dssp EEEESCCC
T ss_pred EEEecCCC
Confidence 77777654
No 448
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=21.98 E-value=2.8e+02 Score=21.41 Aligned_cols=71 Identities=14% Similarity=0.092 Sum_probs=39.7
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHh-CCCCEEEEEecCCCCCHHHHHHHHHHHHHhcC-CCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMA-MGVDRAILIETDTILQSLSVAKLLQVIVKKEN-PQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a-~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~-~dlVl~G~ 86 (219)
.+.|.+|.++ |.+|+++.-......+.++++.. .|. ++..+..| -.|...+..++.++.++.+ +|+++.-.
T Consensus 28 ~~~a~~l~~~---G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~D-l~~~~~~~~~~~~~~~~~~~id~li~~A 100 (265)
T 1h5q_A 28 LAFTRAVAAA---GANVAVIYRSAADAVEVTEKVGKEFGV-KTKAYQCD-VSNTDIVTKTIQQIDADLGPISGLIANA 100 (265)
T ss_dssp HHHHHHHHHT---TEEEEEEESSCTTHHHHHHHHHHHHTC-CEEEEECC-TTCHHHHHHHHHHHHHHSCSEEEEEECC
T ss_pred HHHHHHHHHC---CCeEEEEeCcchhhHHHHHHHHHhcCC-eeEEEEee-CCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 3456667664 36777665533333333443322 243 34444433 4577777777777776654 78777644
No 449
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=21.97 E-value=1.3e+02 Score=20.22 Aligned_cols=62 Identities=21% Similarity=0.253 Sum_probs=35.0
Q ss_pred HHHHHHHHHhhhhc-CCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHH
Q psy9408 8 EIAIESAIRLRESS-NKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVK 75 (219)
Q Consensus 8 ~~Ale~A~~l~e~~-g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik 75 (219)
...++...+|++.. .....|+.++--. ..+...+++..|++..+. . .+++......|..+++
T Consensus 64 ~~g~~~~~~lr~~~~~~~~pii~~s~~~--~~~~~~~~~~~g~~~~l~-K---P~~~~~L~~~l~~~l~ 126 (129)
T 3h1g_A 64 MNGLDLVKKVRSDSRFKEIPIIMITAEG--GKAEVITALKAGVNNYIV-K---PFTPQVLKEKLEVVLG 126 (129)
T ss_dssp SCHHHHHHHHHTSTTCTTCCEEEEESCC--SHHHHHHHHHHTCCEEEE-S---CCCHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHhcCCCCCCeEEEEeCCC--ChHHHHHHHHcCccEEEe-C---CCCHHHHHHHHHHHhc
Confidence 34566666676531 1123455555332 345667788888886433 2 4677766666666553
No 450
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=21.90 E-value=2.8e+02 Score=21.51 Aligned_cols=69 Identities=14% Similarity=0.169 Sum_probs=42.9
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|++|+++ |.+|+++.-.+. ++..+++...|.+ +..+..| -.|...+.+++.++.++. ++|+++.-.
T Consensus 18 ~~ia~~l~~~---G~~V~~~~r~~~--~~~~~~l~~~~~~-~~~~~~D-~~~~~~v~~~~~~~~~~~g~id~lv~~A 87 (255)
T 2q2v_A 18 LGIAQVLARA---GANIVLNGFGDP--APALAEIARHGVK-AVHHPAD-LSDVAQIEALFALAEREFGGVDILVNNA 87 (255)
T ss_dssp HHHHHHHHHT---TCEEEEECSSCC--HHHHHHHHTTSCC-EEEECCC-TTSHHHHHHHHHHHHHHHSSCSEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEeCCch--HHHHHHHHhcCCc-eEEEeCC-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 4567777775 467776654443 3444555455543 4444433 467788888888877776 589888644
No 451
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=21.89 E-value=1.8e+02 Score=23.96 Aligned_cols=13 Identities=23% Similarity=0.649 Sum_probs=7.7
Q ss_pred echHHHHHHHHhh
Q psy9408 202 VKNVIELIDKLKN 214 (219)
Q Consensus 202 ~~~~~~l~~~L~~ 214 (219)
++.+.+-++.|++
T Consensus 315 l~~~~~A~~~l~~ 327 (348)
T 4eez_A 315 LEEINDIIDEMKA 327 (348)
T ss_dssp GGGHHHHHHHHHT
T ss_pred HHHHHHHHHHHHC
Confidence 4556666666654
No 452
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=21.89 E-value=87 Score=26.40 Aligned_cols=16 Identities=25% Similarity=0.223 Sum_probs=8.7
Q ss_pred HHHHHhCCCCEEEEEe
Q psy9408 41 LQIAMAMGVDRAILIE 56 (219)
Q Consensus 41 lr~~~a~GaD~v~~v~ 56 (219)
++-|.++|+.+++.++
T Consensus 208 iqlak~~Ga~~Vi~~~ 223 (373)
T 1p0f_A 208 IVGCKAAGASRIIGVG 223 (373)
T ss_dssp HHHHHHHTCSEEEEEC
T ss_pred HHHHHHcCCCeEEEEC
Confidence 3444456666665554
No 453
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=21.88 E-value=53 Score=28.39 Aligned_cols=36 Identities=11% Similarity=0.186 Sum_probs=24.2
Q ss_pred HHHHHHHhcCCCEEEEc-ccccCCCcCcH-HHHHHHHcCCCcc
Q psy9408 69 LLQVIVKKENPQLVILG-KQSIDSDNNQT-GQMLAALLNWPQA 109 (219)
Q Consensus 69 ~la~~ik~~~~dlVl~G-~~s~d~~~~~v-~~~lA~~Lg~p~v 109 (219)
.+.+++++.+||+|++= .+. -.+ +...|.++|+|++
T Consensus 105 ~l~~~l~~~kPD~Vi~~gd~~-----~~l~~~laA~~~~IPv~ 142 (403)
T 3ot5_A 105 GINEVIAAENPDIVLVHGDTT-----TSFAAGLATFYQQKMLG 142 (403)
T ss_dssp HHHHHHHHHCCSEEEEETTCH-----HHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHcCCCEEEEECCch-----hHHHHHHHHHHhCCCEE
Confidence 34566778899999863 221 124 4677789999965
No 454
>3c6c_A 3-keto-5-aminohexanoate cleavage enzyme; DUF849 family protein, TIM beta/alpha-barrel fold, structura genomics; HET: MSE; 1.72A {Ralstonia eutropha}
Probab=21.87 E-value=1.1e+02 Score=26.13 Aligned_cols=51 Identities=12% Similarity=0.078 Sum_probs=36.5
Q ss_pred hHHHHHHHHhCCCCEEE-EEecC-C---CCCHHHHHHHHHHHHHhcCCCEEEEcccc
Q psy9408 37 CKEILQIAMAMGVDRAI-LIETD-T---ILQSLSVAKLLQVIVKKENPQLVILGKQS 88 (219)
Q Consensus 37 ~~~~lr~~~a~GaD~v~-~v~~~-~---~~d~~~~A~~la~~ik~~~~dlVl~G~~s 88 (219)
..+...+|...||.-+. ++.|+ . ..|++.|.+++. .|++..+|+|+-=.+.
T Consensus 50 Ia~~A~~a~~AGAaivHlHvRd~~~G~ps~d~~~y~e~~~-~IR~~~~d~ii~~TTg 105 (316)
T 3c6c_A 50 IADACVEAAKAGASVAHIHVRDPKTGGGSRDPVLFKEVVD-RVRSSGTDIVLNLTCG 105 (316)
T ss_dssp HHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHHHHHH-HHHTTTCCCEEEEECC
T ss_pred HHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHH-HHHHHCCCeEEEeCCC
Confidence 34556778889999765 45654 2 469999999995 5666678998865553
No 455
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=21.87 E-value=1.7e+02 Score=19.07 Aligned_cols=59 Identities=17% Similarity=0.169 Sum_probs=32.5
Q ss_pred hHHHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHH
Q psy9408 7 DEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQV 72 (219)
Q Consensus 7 D~~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~ 72 (219)
+...++...++++.. +...++.++-.. ..+....++..|++..+. . .+++......|..
T Consensus 59 ~~~g~~~~~~l~~~~-~~~~ii~~s~~~--~~~~~~~~~~~g~~~~l~-K---P~~~~~l~~~i~~ 117 (120)
T 1tmy_A 59 EMNGIDAIKEIMKID-PNAKIIVCSAMG--QQAMVIEAIKAGAKDFIV-K---PFQPSRVVEALNK 117 (120)
T ss_dssp GGCHHHHHHHHHHHC-TTCCEEEEECTT--CHHHHHHHHHTTCCEEEE-S---SCCHHHHHHHHHH
T ss_pred CCcHHHHHHHHHhhC-CCCeEEEEeCCC--CHHHHHHHHHhCcceeEe-C---CCCHHHHHHHHHH
Confidence 344566666776653 234565555333 245567778888886432 2 3555555555443
No 456
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=21.84 E-value=2.9e+02 Score=21.59 Aligned_cols=73 Identities=7% Similarity=0.038 Sum_probs=41.2
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhC-CCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEccc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAM-GVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGKQ 87 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~-GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~~ 87 (219)
...|.+|+++ |.+|+++.-.+...++..+++... .-.++..+..| -.|+..+.+++.++.++. .+|+++.-..
T Consensus 21 ~~ia~~l~~~---G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D-~~~~~~v~~~~~~~~~~~g~id~lv~~Ag 95 (267)
T 2gdz_A 21 RAFAEALLLK---GAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCD-VADQQQLRDTFRKVVDHFGRLDILVNNAG 95 (267)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECC-TTSHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecC-CCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 3456677765 467777654433222222222221 12345555533 467788888888877765 4798886543
No 457
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=21.84 E-value=1.4e+02 Score=25.65 Aligned_cols=64 Identities=11% Similarity=0.106 Sum_probs=45.1
Q ss_pred HHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecC-CCCCHHHHHHHHHHHHHhc
Q psy9408 12 ESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETD-TILQSLSVAKLLQVIVKKE 77 (219)
Q Consensus 12 e~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~-~~~d~~~~A~~la~~ik~~ 77 (219)
+.-.++++.. ...|+.+..|+-...+.++.++..|+|-+.+.+.= ...||...++.+.+++++.
T Consensus 230 ell~~i~~~~--~IPVV~VAeGGI~Tpeda~~~l~~GaDgV~VGsaI~~a~dP~~aar~l~~ai~~~ 294 (330)
T 2yzr_A 230 EVLLEVKKLG--RLPVVNFAAGGVATPADAALMMQLGSDGVFVGSGIFKSENPLERARAIVEATYNY 294 (330)
T ss_dssp HHHHHHHHHT--SCSSEEEECSCCCSHHHHHHHHHTTCSCEEESHHHHTSSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhC--CCCeEEEEECCCCCHHHHHHHHHcCcCEEeeHHHHhcCCCHHHHHHHHHHHHHhc
Confidence 4445556542 23566678888754567888899999998886631 1468999999999988753
No 458
>3kty_A Probable methyltransferase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 2.30A {Bordetella pertussis}
Probab=21.83 E-value=1.8e+02 Score=21.94 Aligned_cols=32 Identities=13% Similarity=0.174 Sum_probs=24.9
Q ss_pred EEEEEEecCcc---hHHHHHHHHhCCCCEEEEEec
Q psy9408 26 EIIAISCGNKK---CKEILQIAMAMGVDRAILIET 57 (219)
Q Consensus 26 ~V~av~~G~~~---~~~~lr~~~a~GaD~v~~v~~ 57 (219)
.+..+..++.+ .-..+|.|.++|++.++++..
T Consensus 10 ~~~vvL~~~~dp~N~Gai~Rta~a~G~~~l~lv~~ 44 (173)
T 3kty_A 10 RVRFIMTQPSHPGNVGSAARAIKTMGFGELVLVAP 44 (173)
T ss_dssp TEEEEEESCCCHHHHHHHHHHHHHTTCCCEEEESC
T ss_pred CeEEEEeCCCCCCcHHHHHHHHHHcCCCEEEEeCC
Confidence 46777777664 344799999999999999874
No 459
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=21.80 E-value=2.1e+02 Score=23.74 Aligned_cols=17 Identities=18% Similarity=0.229 Sum_probs=11.9
Q ss_pred HHHHHHhCCCCEEEEEe
Q psy9408 40 ILQIAMAMGVDRAILIE 56 (219)
Q Consensus 40 ~lr~~~a~GaD~v~~v~ 56 (219)
+++-|..+|+.+++.++
T Consensus 195 aiqlak~~Ga~~Vi~~~ 211 (363)
T 3m6i_A 195 TMLCAKAAGACPLVITD 211 (363)
T ss_dssp HHHHHHHTTCCSEEEEE
T ss_pred HHHHHHHcCCCEEEEEC
Confidence 45666678887777765
No 460
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*
Probab=21.75 E-value=65 Score=29.54 Aligned_cols=45 Identities=11% Similarity=0.214 Sum_probs=29.8
Q ss_pred HHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccc
Q psy9408 38 KEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQS 88 (219)
Q Consensus 38 ~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s 88 (219)
++.++++-+.|+|-+|++.+.. ++.+ ..||+.+ .+.|+||.|++-
T Consensus 184 ~~~v~~lk~~g~d~iI~l~H~G-~~~d---~~la~~~--~giDlIlgGHtH 228 (579)
T 3ztv_A 184 QIMANALKQQGINKIILLSHAG-SEKN---IEIAQKV--NDIDVIVTGDSH 228 (579)
T ss_dssp HHHHHHHHTTTCCCEEEEEETC-HHHH---HHHHHHC--SSCCEEEECSSC
T ss_pred HHHHHHHHhCCCCEEEEEeccC-chhh---HHHHHhC--CCCCEEEeCCCC
Confidence 4455666678999999998643 2222 3344333 369999999975
No 461
>1jfl_A Aspartate racemase; alpha-beta structure, HOMO-dimer, homologous domains, isomer; 1.90A {Pyrococcus horikoshii} SCOP: c.78.2.1 c.78.2.1 PDB: 2dx7_A* 1iu9_A
Probab=21.73 E-value=1.2e+02 Score=23.75 Aligned_cols=40 Identities=5% Similarity=0.062 Sum_probs=30.7
Q ss_pred HHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcccc
Q psy9408 68 KLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATF 111 (219)
Q Consensus 68 ~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~ 111 (219)
...++.+.+.++|.|++++.+.. .....+.+.+++|++.-
T Consensus 64 ~~~~~~l~~~g~d~iviaCnTa~----~~~~~l~~~~~iPvi~i 103 (228)
T 1jfl_A 64 IWTAKRLEECGADFIIMPCNTAH----AFVEDIRKAIKIPIISM 103 (228)
T ss_dssp HHHHHHHHHHTCSEEECSCTGGG----GGHHHHHHHCSSCBCCH
T ss_pred HHHHHHHHHcCCCEEEEcCccHH----HHHHHHHHhCCCCEech
Confidence 34455556679999999998742 57889999999998864
No 462
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=21.66 E-value=81 Score=28.78 Aligned_cols=45 Identities=13% Similarity=0.121 Sum_probs=31.5
Q ss_pred HHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcccceeE
Q psy9408 68 KLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASK 114 (219)
Q Consensus 68 ~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~~ 114 (219)
+.+++.+++-+-=+|++|... . +..+--..+|+++|+|+++...+
T Consensus 196 ~~~~~~l~~a~rpvil~G~g~-~-~a~~~l~~lae~~~~Pv~~t~~g 240 (590)
T 1v5e_A 196 DAAVELLNNSKRPVIYAGIGT-M-GHGPAVQELARKIKAPVITTGKN 240 (590)
T ss_dssp HHHHHHHHHCSSEEEEECGGG-T-TCHHHHHHHHHHHTCCEEECTTC
T ss_pred HHHHHHHHhCCCeEEEEcCch-h-HHHHHHHHHHHHHCCCEEEcccc
Confidence 334445555444588888877 4 55567788999999999976544
No 463
>1g5c_A Beta-carbonic anhydrase; zinc, hepes, lyase; HET: EPE; 2.10A {Methanothermobacterthermautotrophicus} SCOP: c.53.2.1
Probab=21.63 E-value=2.6e+02 Score=21.05 Aligned_cols=70 Identities=16% Similarity=0.273 Sum_probs=48.1
Q ss_pred cEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcC-CCEEEEcccccCCCcC
Q psy9408 25 KEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKEN-PQLVILGKQSIDSDNN 94 (219)
Q Consensus 25 ~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~-~dlVl~G~~s~d~~~~ 94 (219)
-++..++.-+....+.+.+.+..|.-+++++....+.-+..+...|.=+++..+ ..+|+||++..++-..
T Consensus 25 p~~lvi~C~DSRv~~~i~~i~~~~pGdlfviRnagn~v~~~~~~sleyAv~~L~v~~IvV~GH~~CGav~a 95 (170)
T 1g5c_A 25 PKLCIITCMDSRLIDLLERALGIGRGDAKVIKNAGNIVDDGVIRSAAVAIYALGDNEIIIVGHTDCGMARL 95 (170)
T ss_dssp CCEEEEEECCGGGTTHHHHHHTCCTTSCEEEEETTCCCCHHHHHHHHHHHHHHCCCEEEEEEESSCCTTSC
T ss_pred CeEEEEEecCCCcChhHHHHhCCCCCCEEEEecccccCCHHHHHHHHHHHHhcCCCEEEEEccCCCCchhc
Confidence 467777777766666666778888889999887654433344455555566666 6889999998876544
No 464
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=21.62 E-value=2.7e+02 Score=21.55 Aligned_cols=65 Identities=15% Similarity=0.061 Sum_probs=37.3
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHH-hCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAM-AMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~-a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|.+|+++ |.+|+++.-.+. .++++. ..| +..+..| -.|.+.+.+++.++.++. +.|+++.-.
T Consensus 19 ~~ia~~l~~~---G~~V~~~~r~~~----~~~~~~~~~~---~~~~~~D-~~~~~~~~~~~~~~~~~~g~id~lvn~A 85 (245)
T 1uls_A 19 RATLELFAKE---GARLVACDIEEG----PLREAAEAVG---AHPVVMD-VADPASVERGFAEALAHLGRLDGVVHYA 85 (245)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHH----HHHHHHHTTT---CEEEECC-TTCHHHHHHHHHHHHHHHSSCCEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEeCCHH----HHHHHHHHcC---CEEEEec-CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 3456677765 467776654322 222222 224 2333322 457788888888887776 489888644
No 465
>3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus}
Probab=21.58 E-value=1.5e+02 Score=22.17 Aligned_cols=57 Identities=14% Similarity=0.065 Sum_probs=40.5
Q ss_pred HHHHhCCCCEEEEEecCC--------CCCHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHH
Q psy9408 42 QIAMAMGVDRAILIETDT--------ILQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAAL 103 (219)
Q Consensus 42 r~~~a~GaD~v~~v~~~~--------~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~ 103 (219)
...++.|. +++.++-.. .++...+++.+.++++..+-.++++|.+. |+.++.++|.+
T Consensus 43 ~~~l~~~~-~vi~~d~~G~G~S~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~S~----Gg~ia~~~a~~ 107 (262)
T 3r0v_A 43 AERLAPHF-TVICYDRRGRGDSGDTPPYAVEREIEDLAAIIDAAGGAAFVFGMSS----GAGLSLLAAAS 107 (262)
T ss_dssp HHHHTTTS-EEEEECCTTSTTCCCCSSCCHHHHHHHHHHHHHHTTSCEEEEEETH----HHHHHHHHHHT
T ss_pred HHHHhcCc-EEEEEecCCCcCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEEcH----HHHHHHHHHHh
Confidence 34444554 466666421 35788899999999998777899999875 46677777776
No 466
>2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A*
Probab=21.55 E-value=1.2e+02 Score=23.85 Aligned_cols=57 Identities=9% Similarity=-0.081 Sum_probs=41.1
Q ss_pred HHHhCCCCEEEEEecCC---------CCCHHHHHHHHHHHHHhcC-CCEEEEcccccCCCcCcHHHHHHHHc
Q psy9408 43 IAMAMGVDRAILIETDT---------ILQSLSVAKLLQVIVKKEN-PQLVILGKQSIDSDNNQTGQMLAALL 104 (219)
Q Consensus 43 ~~~a~GaD~v~~v~~~~---------~~d~~~~A~~la~~ik~~~-~dlVl~G~~s~d~~~~~v~~~lA~~L 104 (219)
..++.+ =++|.++-.. .|+.+.+++-+.+++++.+ -..+|+|++- |+.++..+|.+-
T Consensus 48 ~~L~~~-~rvia~DlrGhG~S~~~~~~~~~~~~a~dl~~ll~~l~~~~~~lvGhSm----GG~va~~~A~~~ 114 (276)
T 2wj6_A 48 QELDAD-FRVIVPNWRGHGLSPSEVPDFGYQEQVKDALEILDQLGVETFLPVSHSH----GGWVLVELLEQA 114 (276)
T ss_dssp HHHTTT-SCEEEECCTTCSSSCCCCCCCCHHHHHHHHHHHHHHHTCCSEEEEEEGG----GHHHHHHHHHHH
T ss_pred HHHhcC-CEEEEeCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCceEEEEECH----HHHHHHHHHHHh
Confidence 345544 3688777321 3678899999999999887 4689999974 567888777663
No 467
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=21.46 E-value=2.8e+02 Score=21.31 Aligned_cols=72 Identities=13% Similarity=0.093 Sum_probs=42.9
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
...|.+|.+.. |.+|+++.-.+...++..+++...|. ++..+..| -.|...+..++.++.++. ++|+|+.-.
T Consensus 18 ~~~a~~L~~~~--g~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D-l~~~~~~~~~~~~~~~~~g~id~li~~A 90 (276)
T 1wma_A 18 LAIVRDLCRLF--SGDVVLTARDVTRGQAAVQQLQAEGL-SPRFHQLD-IDDLQSIRALRDFLRKEYGGLDVLVNNA 90 (276)
T ss_dssp HHHHHHHHHHS--SSEEEEEESSHHHHHHHHHHHHHTTC-CCEEEECC-TTCHHHHHHHHHHHHHHHSSEEEEEECC
T ss_pred HHHHHHHHHhc--CCeEEEEeCChHHHHHHHHHHHhcCC-eeEEEECC-CCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 45567777622 46777766544434444555555553 34444433 457777777777777665 589887544
No 468
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=21.40 E-value=3.1e+02 Score=21.81 Aligned_cols=68 Identities=7% Similarity=0.124 Sum_probs=36.6
Q ss_pred HHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEccc
Q psy9408 12 ESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGKQ 87 (219)
Q Consensus 12 e~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~~ 87 (219)
+.|++|+++ |.+|+++.-.....++..++ .|. ++..+..| -.|...+.+++.++.++. ++|+++.-..
T Consensus 42 aia~~l~~~---G~~V~~~~r~~~~~~~~~~~---~~~-~~~~~~~D-v~d~~~v~~~~~~~~~~~g~iD~lv~nAg 110 (277)
T 4dqx_A 42 ATAELFAKN---GAYVVVADVNEDAAVRVANE---IGS-KAFGVRVD-VSSAKDAESMVEKTTAKWGRVDVLVNNAG 110 (277)
T ss_dssp HHHHHHHHT---TCEEEEEESSHHHHHHHHHH---HCT-TEEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHC---CCEEEEEeCCHHHHHHHHHH---hCC-ceEEEEec-CCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 445566654 35665554332222222222 233 34444422 467788888888877775 5898886543
No 469
>2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A*
Probab=21.37 E-value=1.1e+02 Score=23.82 Aligned_cols=73 Identities=10% Similarity=0.112 Sum_probs=46.6
Q ss_pred EEEEEEecCcc----hHHHHHHHHhCCCCEEEEEecCC----------CCCHHHHHHHHHHHHHhcC--CCEEEEccccc
Q psy9408 26 EIIAISCGNKK----CKEILQIAMAMGVDRAILIETDT----------ILQSLSVAKLLQVIVKKEN--PQLVILGKQSI 89 (219)
Q Consensus 26 ~V~av~~G~~~----~~~~lr~~~a~GaD~v~~v~~~~----------~~d~~~~A~~la~~ik~~~--~dlVl~G~~s~ 89 (219)
...+++=|-.. -...+..+.+.|. ++|.++-.. .++...+++.|.+++++.+ -.++|+|++-
T Consensus 11 ~~vvllHG~~~~~~~w~~~~~~L~~~g~-~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSm- 88 (264)
T 2wfl_A 11 KHFVLVHGGCLGAWIWYKLKPLLESAGH-KVTAVDLSAAGINPRRLDEIHTFRDYSEPLMEVMASIPPDEKVVLLGHSF- 88 (264)
T ss_dssp CEEEEECCTTCCGGGGTTHHHHHHHTTC-EEEEECCTTSTTCSCCGGGCCSHHHHHHHHHHHHHHSCTTCCEEEEEETT-
T ss_pred CeEEEECCCccccchHHHHHHHHHhCCC-EEEEeecCCCCCCCCCcccccCHHHHHHHHHHHHHHhCCCCCeEEEEeCh-
Confidence 44555555331 1223444434554 677777421 2467889999999999885 4799999964
Q ss_pred CCCcCcHHHHHHHH
Q psy9408 90 DSDNNQTGQMLAAL 103 (219)
Q Consensus 90 d~~~~~v~~~lA~~ 103 (219)
||.++..+|.+
T Consensus 89 ---GG~va~~~a~~ 99 (264)
T 2wfl_A 89 ---GGMSLGLAMET 99 (264)
T ss_dssp ---HHHHHHHHHHH
T ss_pred ---HHHHHHHHHHh
Confidence 45677777765
No 470
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=21.37 E-value=44 Score=30.25 Aligned_cols=52 Identities=19% Similarity=0.181 Sum_probs=34.1
Q ss_pred CHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcccceeE
Q psy9408 62 QSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASK 114 (219)
Q Consensus 62 d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~~ 114 (219)
+...+. .+++.+++-+-=+|++|......+..+---.+|+++|+|+++...+
T Consensus 197 ~~~~i~-~~~~~l~~a~rpvIl~G~g~~~~~a~~~l~~lae~~~~Pv~~t~~~ 248 (564)
T 2q28_A 197 CPKSVT-SAISLLAKAERPLIILGKGAAYSQADEQLREFIESAQIPFLPMSMA 248 (564)
T ss_dssp CHHHHH-HHHHHHHHCSSEEEEECHHHHHHTCHHHHHHHHHHHTCCEEECGGG
T ss_pred CHHHHH-HHHHHHHcCCCcEEEECcccccccHHHHHHHHHHHhCCCEEeccCc
Confidence 344443 3444555544458888877643344566789999999999977654
No 471
>3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A
Probab=21.28 E-value=1.9e+02 Score=22.87 Aligned_cols=51 Identities=10% Similarity=0.046 Sum_probs=38.2
Q ss_pred CEEEEEecCC---CCCHHHHHHHHHHHHHhcCC--CEEEEcccccCCCcCcHHHHHHHHc
Q psy9408 50 DRAILIETDT---ILQSLSVAKLLQVIVKKENP--QLVILGKQSIDSDNNQTGQMLAALL 104 (219)
Q Consensus 50 D~v~~v~~~~---~~d~~~~A~~la~~ik~~~~--dlVl~G~~s~d~~~~~v~~~lA~~L 104 (219)
-+++.++... ..+...++..+.+.+++.++ .++|+|++- |+.++..+|.++
T Consensus 49 ~~v~~~d~~~~~~~~~~~~~a~~~~~~i~~~~~~~~~~l~GhS~----Gg~va~~~a~~~ 104 (283)
T 3tjm_A 49 IPTYGLQCTRAAPLDSIHSLAAYYIDCIRQVQPEGPYRVAGYSY----GACVAFEMCSQL 104 (283)
T ss_dssp SCEEEECCCTTSCCSCHHHHHHHHHHHHTTTCCSSCCEEEEETH----HHHHHHHHHHHH
T ss_pred ceEEEEecCCCCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEECH----hHHHHHHHHHHH
Confidence 5677776432 45788889999999987744 588899864 467888888877
No 472
>1nmo_A Hypothetical protein YBGI; toroidal structure, structure 2 project, S2F, structural genomics, unknown function; 2.20A {Escherichia coli} SCOP: c.135.1.1 PDB: 1nmp_A
Probab=21.24 E-value=86 Score=25.44 Aligned_cols=69 Identities=14% Similarity=0.218 Sum_probs=40.4
Q ss_pred EEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEcccccCCC-cCcHHHHHHHHcCC
Q psy9408 28 IAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQSIDSD-NNQTGQMLAALLNW 106 (219)
Q Consensus 28 ~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~-~~~v~~~lA~~Lg~ 106 (219)
+|++-|.. ...++.+.+.|+|- +++.+-.+.. +..+++.+..+|.+|+..+..- -..++..|.+.+++
T Consensus 168 VAv~~GsG--~~~~~~a~~~gaD~--~iTGd~~~h~-------~~~a~e~gi~~i~~GH~~tE~~~~~~l~~~L~~~~~~ 236 (247)
T 1nmo_A 168 VAWCTGGG--QSFIDSAARFGVDA--FITGEVSEQT-------IHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDL 236 (247)
T ss_dssp EEECSSSC--GGGHHHHHHHCCSE--EEESCCCHHH-------HHHHHHTTCEEEECCHHHHTSHHHHHHHHHHHHHSSC
T ss_pred EEEECCCc--HHHHHHHHHcCCCE--EEEcCccHHH-------HHHHHHCCCeEEEcCCHHHHHHHHHHHHHHHHHhcCC
Confidence 55665544 46788999999993 3443322211 1123456899999999875432 22445555555554
Q ss_pred C
Q psy9408 107 P 107 (219)
Q Consensus 107 p 107 (219)
+
T Consensus 237 ~ 237 (247)
T 1nmo_A 237 D 237 (247)
T ss_dssp E
T ss_pred c
Confidence 3
No 473
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=21.16 E-value=94 Score=26.38 Aligned_cols=88 Identities=19% Similarity=0.183 Sum_probs=46.5
Q ss_pred HHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCC-----C---CCHHHH--------HHHHHHH
Q psy9408 10 AIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDT-----I---LQSLSV--------AKLLQVI 73 (219)
Q Consensus 10 Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~-----~---~d~~~~--------A~~la~~ 73 (219)
++..|.+|+++ |.+|+.++-.. ..+.+. ..|.+-+- +.++. . ...... ...+.++
T Consensus 17 ~l~la~~L~~~---Gh~V~~~~~~~--~~~~v~---~~g~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 87 (415)
T 1iir_A 17 LVALAVRVRDL---GADVRMCAPPD--CAERLA---EVGVPHVP-VGPSARAPIQRAKPLTAEDVRRFTTEAIATQFDEI 87 (415)
T ss_dssp HHHHHHHHHHT---TCEEEEEECGG--GHHHHH---HTTCCEEE-CCC-------CCSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHC---CCeEEEEcCHH--HHHHHH---HcCCeeee-CCCCHHHHhhcccccchHHHHHHHHHHHHHHHHHH
Confidence 56778888875 47888766443 233332 35766432 22110 0 000011 1122233
Q ss_pred HH-hcCCCEEEEcccccCCCcCcH--HHHHHHHcCCCcccc
Q psy9408 74 VK-KENPQLVILGKQSIDSDNNQT--GQMLAALLNWPQATF 111 (219)
Q Consensus 74 ik-~~~~dlVl~G~~s~d~~~~~v--~~~lA~~Lg~p~vt~ 111 (219)
.+ +.+||+|+..... ... +..+|.+||+|++..
T Consensus 88 ~~~~~~pD~vi~d~~~-----~~~~~~~~~A~~lgiP~v~~ 123 (415)
T 1iir_A 88 PAAAEGCAAVVTTGLL-----AAAIGVRSVAEKLGIPYFYA 123 (415)
T ss_dssp HHHTTTCSEEEEESCH-----HHHHHHHHHHHHHTCCEEEE
T ss_pred HHHhcCCCEEEECChh-----HhHhhHHHHHHHhCCCEEEE
Confidence 32 4589999965421 114 577899999998754
No 474
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=21.14 E-value=96 Score=25.56 Aligned_cols=93 Identities=12% Similarity=0.069 Sum_probs=46.5
Q ss_pred HHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHH-HHhCCCCEEEEEecC-CCCCHH----HHHHHHHHHHHhcCCCEEE
Q psy9408 10 AIESAIRLRESSNKIKEIIAISCGNKKCKEILQI-AMAMGVDRAILIETD-TILQSL----SVAKLLQVIVKKENPQLVI 83 (219)
Q Consensus 10 Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~-~~a~GaD~v~~v~~~-~~~d~~----~~A~~la~~ik~~~~dlVl 83 (219)
+...+..|++. + |.++..++.|... ..... .-.+|...-+.+.-. ...... .....+.+++++.+||+|+
T Consensus 21 ~~~l~~~L~~~-~-g~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvv~ 96 (376)
T 1v4v_A 21 MAPVYLALRGI-P-GLKPLVLLTGQHR--EQLRQALSLFGIQEDRNLDVMQERQALPDLAARILPQAARALKEMGADYVL 96 (376)
T ss_dssp HHHHHHHHHTS-T-TEEEEEEECSSCH--HHHHHHHHTTTCCCSEECCCCSSCCCHHHHHHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHhC-C-CCceEEEEcCCcH--HHHHHHHHHcCCCcccccccCCCCccHHHHHHHHHHHHHHHHHHcCCCEEE
Confidence 34445556553 2 3566666666532 22222 223665321222211 112211 2234567788888999999
Q ss_pred EcccccCCCcCcHH-HHHHHHcCCCccc
Q psy9408 84 LGKQSIDSDNNQTG-QMLAALLNWPQAT 110 (219)
Q Consensus 84 ~G~~s~d~~~~~v~-~~lA~~Lg~p~vt 110 (219)
+-... ...++ ...|.++++|++.
T Consensus 97 ~~~~~----~~~~~~~~~a~~~~ip~v~ 120 (376)
T 1v4v_A 97 VHGDT----LTTFAVAWAAFLEGIPVGH 120 (376)
T ss_dssp EESSC----HHHHHHHHHHHHTTCCEEE
T ss_pred EeCCh----HHHHHHHHHHHHhCCCEEE
Confidence 83210 11243 5567778999763
No 475
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=21.12 E-value=82 Score=26.63 Aligned_cols=11 Identities=9% Similarity=0.063 Sum_probs=5.2
Q ss_pred chHHHHHHHHh
Q psy9408 203 KNVIELIDKLK 213 (219)
Q Consensus 203 ~~~~~l~~~L~ 213 (219)
+.+.+-++.+.
T Consensus 336 ~~~~~A~~~~~ 346 (363)
T 4dvj_A 336 ANLKQAHALVE 346 (363)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 34444455544
No 476
>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, cataly transferase; HET: 9DA; 1.85A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1l1r_A*
Probab=21.09 E-value=85 Score=23.97 Aligned_cols=38 Identities=18% Similarity=-0.018 Sum_probs=24.5
Q ss_pred HHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcc
Q psy9408 68 KLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQA 109 (219)
Q Consensus 68 ~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~v 109 (219)
+.|++.++..++|+|+.-. . .|-.++..+|..||+|++
T Consensus 43 ~~la~~~~~~~~d~Iv~vp-~---rG~~~A~~la~~l~~p~~ 80 (186)
T 1l1q_A 43 KEVTAHYKDVPITKVVGIE-S---RGFILGGIVANSLGVGFV 80 (186)
T ss_dssp HHHHHHTTTSCCCEEEEES-G---GGHHHHHHHHHHHTCEEE
T ss_pred HHHHHHhhccCCCEEEEcC-c---ccHHHHHHHHHHhCCCEE
Confidence 3344434434678776433 2 345789999999999974
No 477
>1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A*
Probab=21.08 E-value=1e+02 Score=24.20 Aligned_cols=59 Identities=7% Similarity=0.117 Sum_probs=40.1
Q ss_pred HHHHHHhCCCCEEEEEecCC----------CCCHHHHHHHHHHHHHhcC--CCEEEEcccccCCCcCcHHHHHHHH
Q psy9408 40 ILQIAMAMGVDRAILIETDT----------ILQSLSVAKLLQVIVKKEN--PQLVILGKQSIDSDNNQTGQMLAAL 103 (219)
Q Consensus 40 ~lr~~~a~GaD~v~~v~~~~----------~~d~~~~A~~la~~ik~~~--~dlVl~G~~s~d~~~~~v~~~lA~~ 103 (219)
.+..+.+.|. ++|.++-.. .++...+++.|.+++++.+ -.++|+|++- ||.++..+|.+
T Consensus 23 ~~~~L~~~g~-rVia~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSm----GG~va~~~a~~ 93 (273)
T 1xkl_A 23 LKPLLEAAGH-KVTALDLAASGTDLRKIEELRTLYDYTLPLMELMESLSADEKVILVGHSL----GGMNLGLAMEK 93 (273)
T ss_dssp HHHHHHHTTC-EEEECCCTTSTTCCCCGGGCCSHHHHHHHHHHHHHTSCSSSCEEEEEETT----HHHHHHHHHHH
T ss_pred HHHHHHhCCC-EEEEecCCCCCCCccCcccccCHHHHHHHHHHHHHHhccCCCEEEEecCH----HHHHHHHHHHh
Confidence 3344434554 577766321 2467889999999999885 4799999964 46677777765
No 478
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=21.02 E-value=97 Score=25.81 Aligned_cols=17 Identities=29% Similarity=0.274 Sum_probs=8.1
Q ss_pred HHHHHHhCCCCEEEEEe
Q psy9408 40 ILQIAMAMGVDRAILIE 56 (219)
Q Consensus 40 ~lr~~~a~GaD~v~~v~ 56 (219)
.++-+.++|+.+++.++
T Consensus 183 ~~q~a~~~Ga~~Vi~~~ 199 (348)
T 2d8a_A 183 GIAVAKASGAYPVIVSE 199 (348)
T ss_dssp HHHHHHHTTCCSEEEEC
T ss_pred HHHHHHHcCCCEEEEEC
Confidence 34444455654454443
No 479
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=20.95 E-value=81 Score=24.46 Aligned_cols=9 Identities=11% Similarity=0.287 Sum_probs=4.4
Q ss_pred CCCEEEEcc
Q psy9408 78 NPQLVILGK 86 (219)
Q Consensus 78 ~~dlVl~G~ 86 (219)
+.|.|++|.
T Consensus 197 Gad~v~vG~ 205 (223)
T 1y0e_A 197 GVHCSVVGG 205 (223)
T ss_dssp TCSEEEECH
T ss_pred CCCEEEECh
Confidence 455555553
No 480
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=20.93 E-value=3.3e+02 Score=21.88 Aligned_cols=70 Identities=14% Similarity=0.068 Sum_probs=37.8
Q ss_pred HHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEccc
Q psy9408 12 ESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGKQ 87 (219)
Q Consensus 12 e~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~~ 87 (219)
+.|++|+++ |.+|+++.-.. ...+.+++....+. ++..+..| -.|.+.+.+++.++.++. ..|+++.-..
T Consensus 48 aia~~la~~---G~~V~~~~r~~-~~~~~~~~~~~~~~-~~~~~~~D-v~d~~~v~~~~~~~~~~~g~iD~lVnnAG 118 (293)
T 3grk_A 48 GIAKAAREA---GAELAFTYQGD-ALKKRVEPLAEELG-AFVAGHCD-VADAASIDAVFETLEKKWGKLDFLVHAIG 118 (293)
T ss_dssp HHHHHHHHT---TCEEEEEECSH-HHHHHHHHHHHHHT-CEEEEECC-TTCHHHHHHHHHHHHHHTSCCSEEEECCC
T ss_pred HHHHHHHHC---CCEEEEEcCCH-HHHHHHHHHHHhcC-CceEEECC-CCCHHHHHHHHHHHHHhcCCCCEEEECCc
Confidence 455666654 35665543332 12233333332221 24444423 467788888888887775 5898886543
No 481
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=20.92 E-value=44 Score=30.33 Aligned_cols=53 Identities=13% Similarity=0.180 Sum_probs=34.7
Q ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcccceeE
Q psy9408 61 LQSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASK 114 (219)
Q Consensus 61 ~d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~~ 114 (219)
.+...+.+ +++.+++-+-=+|++|......+..+---.+|+++|+|+++...+
T Consensus 198 ~~~~~i~~-~~~~l~~a~rpvIl~G~g~~~~~a~~~l~~lae~~~~Pv~~t~~~ 250 (568)
T 2c31_A 198 PAEDAIAR-AADLIKNAKRPVIMLGKGAAYAQCDDEIRALVEETGIPFLPMGMA 250 (568)
T ss_dssp CCHHHHHH-HHHHHHTCSSEEEEECHHHHHHTCHHHHHHHHHHHTCCEEECGGG
T ss_pred CCHHHHHH-HHHHHHhCCCCEEEECcccccccHHHHHHHHHHHhCCCEEecccc
Confidence 34444433 444555444458888877643334566789999999999977654
No 482
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=20.88 E-value=2.4e+02 Score=20.20 Aligned_cols=49 Identities=8% Similarity=0.003 Sum_probs=28.9
Q ss_pred HHHHHHHHHhhhhcCCCcEEEEEEe-cCcchHHHHHHHHhCCCCEEEEEec
Q psy9408 8 EIAIESAIRLRESSNKIKEIIAISC-GNKKCKEILQIAMAMGVDRAILIET 57 (219)
Q Consensus 8 ~~Ale~A~~l~e~~g~g~~V~av~~-G~~~~~~~lr~~~a~GaD~v~~v~~ 57 (219)
+..|+.+.+..++.|...++..... |. .++..++.+-..++|-++.-..
T Consensus 77 ~~~l~~~~~~~~~~g~~~~~~~~v~~G~-~~~~I~~~a~~~~~DLIV~G~~ 126 (155)
T 3dlo_A 77 KETLSWAVSIIRKEGAEGEEHLLVRGKE-PPDDIVDFADEVDAIAIVIGIR 126 (155)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEESSSC-HHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHHHHHhcCCCceEEEEecCCC-HHHHHHHHHHHcCCCEEEECCC
Confidence 3455555555554432223333233 54 3678888888899998877553
No 483
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=20.82 E-value=57 Score=28.04 Aligned_cols=79 Identities=14% Similarity=0.205 Sum_probs=40.7
Q ss_pred CcEEEEEEecCcchHHHHHHH-HhCCCCEEEEEec--CCCCCHHHHHHH---HHHHHHhcCCCEEEE-cccccCCCcCcH
Q psy9408 24 IKEIIAISCGNKKCKEILQIA-MAMGVDRAILIET--DTILQSLSVAKL---LQVIVKKENPQLVIL-GKQSIDSDNNQT 96 (219)
Q Consensus 24 g~~V~av~~G~~~~~~~lr~~-~a~GaD~v~~v~~--~~~~d~~~~A~~---la~~ik~~~~dlVl~-G~~s~d~~~~~v 96 (219)
+.++..+.-|... +...+. -.+|.+.-+.+.- ....-...++.. +.+++++.+||+|++ |.+. ..+
T Consensus 53 ~~~~~~~~tG~h~--~~~~~~~~~~~i~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~g~~~-----~~~ 125 (396)
T 3dzc_A 53 RFVAKVCVTGQHR--EMLDQVLELFSITPDFDLNIMEPGQTLNGVTSKILLGMQQVLSSEQPDVVLVHGDTA-----TTF 125 (396)
T ss_dssp TEEEEEEECCSSS--HHHHHHHHHTTCCCSEECCCCCTTCCHHHHHHHHHHHHHHHHHHHCCSEEEEETTSH-----HHH
T ss_pred CCcEEEEEecccH--HHHHHHHHhcCCCCceeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCCEEEEECCch-----hHH
Confidence 4567666666542 122222 2356532233331 112222233444 455677889999986 3222 114
Q ss_pred H-HHHHHHcCCCcc
Q psy9408 97 G-QMLAALLNWPQA 109 (219)
Q Consensus 97 ~-~~lA~~Lg~p~v 109 (219)
+ ...|.++|+|++
T Consensus 126 ~~~~aa~~~~IPv~ 139 (396)
T 3dzc_A 126 AASLAAYYQQIPVG 139 (396)
T ss_dssp HHHHHHHTTTCCEE
T ss_pred HHHHHHHHhCCCEE
Confidence 4 567778999965
No 484
>3kyj_B CHEY6 protein, putative histidine protein kinase; protein-protein interaction, histidine kinase, response regulator, phosphorylation; 1.40A {Rhodobacter sphaeroides} PDB: 3kyi_B*
Probab=20.70 E-value=1.8e+02 Score=20.01 Aligned_cols=69 Identities=7% Similarity=-0.005 Sum_probs=35.6
Q ss_pred EEEEEEecCcc-hHHHHHHHHhC--CCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcccccCCCcCcHHHHHH
Q psy9408 26 EIIAISCGNKK-CKEILQIAMAM--GVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGKQSIDSDNNQTGQMLA 101 (219)
Q Consensus 26 ~V~av~~G~~~-~~~~lr~~~a~--GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~~s~d~~~~~v~~~lA 101 (219)
.-.++.+.+.. ....++..+.. |...+....+ .. .++. .+++. .||+||+...-.+.++-++...+-
T Consensus 13 ~~~vlivdd~~~~~~~l~~~L~~~~~~~~v~~~~~-----~~---~al~-~l~~~~~~dlvilD~~l~~~~g~~~~~~lr 83 (145)
T 3kyj_B 13 PYNVMIVDDAAMMRLYIASFIKTLPDFKVVAQAAN-----GQ---EALD-KLAAQPNVDLILLDIEMPVMDGMEFLRHAK 83 (145)
T ss_dssp SEEEEEECSCHHHHHHHHHHHTTCTTEEEEEEESS-----HH---HHHH-HHHHCTTCCEEEECTTSCCCTTCHHHHHHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHhCCCceEEEEECC-----HH---HHHH-HHhcCCCCCEEEEeCCCCCCCHHHHHHHHH
Confidence 45566666543 23455665553 3222222221 11 2332 33445 788888887776666666655555
Q ss_pred HH
Q psy9408 102 AL 103 (219)
Q Consensus 102 ~~ 103 (219)
..
T Consensus 84 ~~ 85 (145)
T 3kyj_B 84 LK 85 (145)
T ss_dssp HH
T ss_pred hc
Confidence 44
No 485
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=20.67 E-value=47 Score=30.10 Aligned_cols=52 Identities=10% Similarity=0.144 Sum_probs=34.7
Q ss_pred CHHHHHHHHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCcccceeE
Q psy9408 62 QSLSVAKLLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFASK 114 (219)
Q Consensus 62 d~~~~A~~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~~ 114 (219)
+...+. .+++.+++-+-=+|++|......+..+---.+|+++|+|+++...+
T Consensus 190 ~~~~v~-~~~~~l~~a~rpvil~G~g~~~~~a~~~l~~lae~~~~Pv~~t~~~ 241 (563)
T 2uz1_A 190 DPADLD-QALALLRKAERPVIVLGSEASRTARKTALSAFVAATGVPVFADYEG 241 (563)
T ss_dssp CHHHHH-HHHHHHHHCSSEEEEECHHHHHHTCHHHHHHHHHHHCCCEEECGGG
T ss_pred CHHHHH-HHHHHHHcCCCcEEEECCccccccHHHHHHHHHHHhCCcEEEcCcc
Confidence 444443 3445555544458888887654344567789999999999877654
No 486
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=20.65 E-value=2.2e+02 Score=22.48 Aligned_cols=67 Identities=13% Similarity=0.094 Sum_probs=38.8
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHh-CCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMA-MGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a-~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|.+|+++ |.+|+++.-.+ +.++++.. .+ .++..+..| -.|.+.+..++.++.++. ..|+++.-.
T Consensus 20 ~aia~~l~~~---G~~V~~~~r~~----~~~~~~~~~~~-~~~~~~~~D-~~~~~~v~~~~~~~~~~~g~iD~lvnnA 88 (263)
T 2a4k_A 20 RAALDLFARE---GASLVAVDREE----RLLAEAVAALE-AEAIAVVAD-VSDPKAVEAVFAEALEEFGRLHGVAHFA 88 (263)
T ss_dssp HHHHHHHHHT---TCEEEEEESCH----HHHHHHHHTCC-SSEEEEECC-TTSHHHHHHHHHHHHHHHSCCCEEEEGG
T ss_pred HHHHHHHHHC---CCEEEEEeCCH----HHHHHHHHHhc-CceEEEEcC-CCCHHHHHHHHHHHHHHcCCCcEEEECC
Confidence 3456677765 36776654332 22332222 23 345555433 467788888888887776 479888644
No 487
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=20.59 E-value=76 Score=27.76 Aligned_cols=39 Identities=26% Similarity=0.133 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHhc-C-CCEEEEcccccCCCcCcHHHHHHHHc
Q psy9408 63 SLSVAKLLQVIVKKE-N-PQLVILGKQSIDSDNNQTGQMLAALL 104 (219)
Q Consensus 63 ~~~~A~~la~~ik~~-~-~dlVl~G~~s~d~~~~~v~~~lA~~L 104 (219)
++-+|..|++.+++. + ..+++||.-+ .+..+.-+|+++|
T Consensus 273 t~~TA~sIa~~~~~~~~~~~v~vcGGGa---~N~~Lm~~L~~~l 313 (370)
T 3cqy_A 273 LDLTCHSIAQDILKLAQEGELFVCGGGA---FNAELMQRLAALL 313 (370)
T ss_dssp HHHHHHHHHHHHHHHCSSEEEEEESGGG---GCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEECCCc---CCHHHHHHHHHhC
Confidence 355788888888763 2 3699999987 4577999999998
No 488
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=20.56 E-value=2e+02 Score=19.33 Aligned_cols=28 Identities=7% Similarity=0.036 Sum_probs=15.3
Q ss_pred HHhcCCCEEEEcccccCCCcCcHHHHHH
Q psy9408 74 VKKENPQLVILGKQSIDSDNNQTGQMLA 101 (219)
Q Consensus 74 ik~~~~dlVl~G~~s~d~~~~~v~~~lA 101 (219)
+++..||+||+.....+.++-++.-++-
T Consensus 47 l~~~~~dlvi~d~~l~~~~g~~~~~~l~ 74 (137)
T 3hdg_A 47 FGLHAPDVIITDIRMPKLGGLEMLDRIK 74 (137)
T ss_dssp HHHHCCSEEEECSSCSSSCHHHHHHHHH
T ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHH
Confidence 3445677777766655555444444443
No 489
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=20.50 E-value=1.7e+02 Score=24.74 Aligned_cols=17 Identities=18% Similarity=0.135 Sum_probs=11.7
Q ss_pred HHHHHHhCCCCEEEEEe
Q psy9408 40 ILQIAMAMGVDRAILIE 56 (219)
Q Consensus 40 ~lr~~~a~GaD~v~~v~ 56 (219)
+++-|.++|+.+++.++
T Consensus 201 aiqlAk~~Ga~~Vi~~~ 217 (398)
T 1kol_A 201 AAASARLLGAAVVIVGD 217 (398)
T ss_dssp HHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHCCCCeEEEEc
Confidence 45556677887777765
No 490
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=20.48 E-value=3e+02 Score=21.29 Aligned_cols=69 Identities=12% Similarity=0.188 Sum_probs=38.5
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEccc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGKQ 87 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~~ 87 (219)
.+.|++|+++ |.+|+.+.-.....++..+ ..+. ++..+..| -.|...+.+++.++.++. ++|+++....
T Consensus 23 ~~~a~~l~~~---G~~V~~~~r~~~~~~~~~~---~~~~-~~~~~~~D-~~~~~~~~~~~~~~~~~~g~id~li~~Ag 92 (261)
T 3n74_A 23 EGMAKRFAKG---GAKVVIVDRDKAGAERVAG---EIGD-AALAVAAD-ISKEADVDAAVEAALSKFGKVDILVNNAG 92 (261)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHH---HHCT-TEEEEECC-TTSHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHC---CCEEEEEcCCHHHHHHHHH---HhCC-ceEEEEec-CCCHHHHHHHHHHHHHhcCCCCEEEECCc
Confidence 4556777765 3576655433322222222 2243 34444433 457777778887777765 5898886543
No 491
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=20.45 E-value=2.9e+02 Score=21.61 Aligned_cols=68 Identities=18% Similarity=0.169 Sum_probs=37.5
Q ss_pred HHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhc-CCCEEEEcc
Q psy9408 11 IESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKE-NPQLVILGK 86 (219)
Q Consensus 11 le~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~-~~dlVl~G~ 86 (219)
.+.|++|+++ |.+|+.+.-.....++..++ .|. ++..+..| -.|...+.+.+.++.++. +.|+++.-.
T Consensus 22 ~a~a~~l~~~---G~~V~~~~r~~~~~~~~~~~---~~~-~~~~~~~D-v~~~~~v~~~~~~~~~~~g~id~lv~nA 90 (255)
T 4eso_A 22 LATVRRLVEG---GAEVLLTGRNESNIARIREE---FGP-RVHALRSD-IADLNEIAVLGAAAGQTLGAIDLLHINA 90 (255)
T ss_dssp HHHHHHHHHT---TCEEEEEESCHHHHHHHHHH---HGG-GEEEEECC-TTCHHHHHHHHHHHHHHHSSEEEEEECC
T ss_pred HHHHHHHHHC---CCEEEEEeCCHHHHHHHHHH---hCC-cceEEEcc-CCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence 3456677765 36776654433222222222 233 34444433 467777777777777765 478887643
No 492
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=20.43 E-value=3.6e+02 Score=22.60 Aligned_cols=95 Identities=12% Similarity=0.006 Sum_probs=53.5
Q ss_pred HHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHH-hCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcCCCEEEEccc
Q psy9408 9 IAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAM-AMGVDRAILIETDTILQSLSVAKLLQVIVKKENPQLVILGKQ 87 (219)
Q Consensus 9 ~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~-a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~~dlVl~G~~ 87 (219)
...+.|.+..++ | .+..=+-+|+....+.++... +.|-|--+.++....++... . .+++.+++.+.+.|= +
T Consensus 144 ~~~~~a~~~~~~-G--f~~vKik~~~~~~~e~v~avr~~~g~~~~l~vDan~~~~~~~-~-~~~~~l~~~~i~~iE---~ 215 (368)
T 1sjd_A 144 QLLDVVGGYLDE-G--YVRIKLKIEPGWDVEPVRAVRERFGDDVLLQVDANTAYTLGD-A-PQLARLDPFGLLLIE---Q 215 (368)
T ss_dssp HHHHHHHHHHHH-T--CSEEEEECBTTBSHHHHHHHHHHHCTTSEEEEECTTCCCGGG-H-HHHHTTGGGCCSEEE---C
T ss_pred HHHHHHHHHHHh-C--ccEEEEecCchhHHHHHHHHHHhcCCCceEEEeccCCCCHHH-H-HHHHHHHhcCCCeEe---C
Confidence 356777777665 3 344334457654445444332 24667667887555677665 3 345556667777653 2
Q ss_pred ccCCCcCcHHHHHHHHcCCCcccc
Q psy9408 88 SIDSDNNQTGQMLAALLNWPQATF 111 (219)
Q Consensus 88 s~d~~~~~v~~~lA~~Lg~p~vt~ 111 (219)
....+.-.-..+|....++|++.+
T Consensus 216 P~~~~~~~~~~~l~~~~~ipIa~d 239 (368)
T 1sjd_A 216 PLEEEDVLGHAELARRIQTPICLD 239 (368)
T ss_dssp CSCTTCHHHHHHHHTTCSSCEEES
T ss_pred CCChhhHHHHHHHHHhCCCCEEEC
Confidence 222222334456777888887654
No 493
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=20.42 E-value=79 Score=21.65 Aligned_cols=62 Identities=13% Similarity=0.077 Sum_probs=37.4
Q ss_pred hHHHHHHHHHhhhhcCCCcEEEEEEecCcchHHHHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHH
Q psy9408 7 DEIAIESAIRLRESSNKIKEIIAISCGNKKCKEILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVK 75 (219)
Q Consensus 7 D~~Ale~A~~l~e~~g~g~~V~av~~G~~~~~~~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik 75 (219)
|...++...+|++.. +...+++++--. ..+....++..|++..+. . .+++......|..+++
T Consensus 71 ~~~g~~~~~~l~~~~-~~~~ii~~s~~~--~~~~~~~~~~~g~~~~l~-K---P~~~~~L~~~i~~~~~ 132 (135)
T 3snk_A 71 DLLGKPGIVEARALW-ATVPLIAVSDEL--TSEQTRVLVRMNASDWLH-K---PLDGKELLNAVTFHDT 132 (135)
T ss_dssp GGGGSTTHHHHHGGG-TTCCEEEEESCC--CHHHHHHHHHTTCSEEEE-S---SCCHHHHHHHHHHTC-
T ss_pred CchHHHHHHHHHhhC-CCCcEEEEeCCC--CHHHHHHHHHcCcHhhcc-C---CCCHHHHHHHHHHHhc
Confidence 344556667777654 234566555332 356678889999987443 3 4677766666665543
No 494
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=20.38 E-value=3.7e+02 Score=22.24 Aligned_cols=55 Identities=20% Similarity=0.008 Sum_probs=31.2
Q ss_pred CCCHhhH--HH---HHHHHHhhhhcCCCcEEEEEE-ecCcchHHHHHHHHhCCCCEEEEEecC
Q psy9408 2 SINPFDE--IA---IESAIRLRESSNKIKEIIAIS-CGNKKCKEILQIAMAMGVDRAILIETD 58 (219)
Q Consensus 2 ~iNp~D~--~A---le~A~~l~e~~g~g~~V~av~-~G~~~~~~~lr~~~a~GaD~v~~v~~~ 58 (219)
++||... .+ ++...+.-++. +.++.... -.+..+.+..+++...++|.++.+-.|
T Consensus 30 I~NP~sg~~~~~~~~~~i~~~L~~~--g~~~~~~~t~~~~~a~~~~~~~~~~~~d~vvv~GGD 90 (337)
T 2qv7_A 30 IYNPTSGKEQFKRELPDALIKLEKA--GYETSAYATEKIGDATLEAERAMHENYDVLIAAGGD 90 (337)
T ss_dssp EECTTSTTSCHHHHHHHHHHHHHHT--TEEEEEEECCSTTHHHHHHHHHTTTTCSEEEEEECH
T ss_pred EECCCCCCCchHHHHHHHHHHHHHc--CCeEEEEEecCcchHHHHHHHHhhcCCCEEEEEcCc
Confidence 5787764 12 22322322332 34555443 333355666777877889998888755
No 495
>3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ...
Probab=20.33 E-value=91 Score=24.17 Aligned_cols=60 Identities=10% Similarity=0.153 Sum_probs=41.7
Q ss_pred HHHHHHhCCCCEEEEEecCC----------CCCHHHHHHHHHHHHHhcC--CCEEEEcccccCCCcCcHHHHHHHHc
Q psy9408 40 ILQIAMAMGVDRAILIETDT----------ILQSLSVAKLLQVIVKKEN--PQLVILGKQSIDSDNNQTGQMLAALL 104 (219)
Q Consensus 40 ~lr~~~a~GaD~v~~v~~~~----------~~d~~~~A~~la~~ik~~~--~dlVl~G~~s~d~~~~~v~~~lA~~L 104 (219)
.+..+.+.| -++|.++-.. .++.+.+++.|.+++++.+ -.++|+|++- ||.++..+|.+.
T Consensus 22 ~~~~L~~~g-~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSm----GG~va~~~a~~~ 93 (257)
T 3c6x_A 22 LKPLLEALG-HKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEALPPGEKVILVGESC----GGLNIAIAADKY 93 (257)
T ss_dssp HHHHHHHTT-CEEEEECCTTSTTCSCCGGGCCSHHHHTHHHHHHHHTSCTTCCEEEEEEET----HHHHHHHHHHHH
T ss_pred HHHHHHhCC-CEEEEeCCCCCCCCCCCcccccCHHHHHHHHHHHHHhccccCCeEEEEECc----chHHHHHHHHhC
Confidence 344443455 3677776421 2567889999999999874 4799999974 566888887763
No 496
>1tuo_A Putative phosphomannomutase; thermus thermophilus HB8, biosynthesis of alginate, structural genomics; 1.70A {Thermus thermophilus}
Probab=20.32 E-value=3.5e+02 Score=23.74 Aligned_cols=57 Identities=12% Similarity=0.049 Sum_probs=38.9
Q ss_pred CCEEEEEecCC-CCCHHHHHHHHHHHHHhcCC-CEEEEcccccCCCcCcHHHHHHHHcCCCccc
Q psy9408 49 VDRAILIETDT-ILQSLSVAKLLQVIVKKENP-QLVILGKQSIDSDNNQTGQMLAALLNWPQAT 110 (219)
Q Consensus 49 aD~v~~v~~~~-~~d~~~~A~~la~~ik~~~~-dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt 110 (219)
+||..+++... ..+.+.+...++..+.+.++ ..|+..-.| ...--.+|+.+|..++-
T Consensus 252 aDR~~vvd~~G~~l~gd~i~~Lla~~l~~~~~~~~vv~tv~s-----s~~l~~~a~~~g~~~~~ 310 (464)
T 1tuo_A 252 ADRVGVVLPGGVFFNPHQVLTTLALYRFRKGHRGRAVKNFAV-----TWLLDRLGERLGFGVTT 310 (464)
T ss_dssp SSBEEEEETTTEEECHHHHHHHHHHHHHHTTCCSEEEEETTS-----CTHHHHHHHHHTCCEEE
T ss_pred CCeEEEEeCCCEEECHHHHHHHHHHHHHhhCCCCeEEEeecc-----hHHHHHHHHHcCCeEEE
Confidence 57777775322 35899999999988866433 455554443 34778889999987653
No 497
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=20.25 E-value=1.6e+02 Score=24.62 Aligned_cols=17 Identities=29% Similarity=0.571 Sum_probs=9.2
Q ss_pred HHHHHHhCCCCEEEEEe
Q psy9408 40 ILQIAMAMGVDRAILIE 56 (219)
Q Consensus 40 ~lr~~~a~GaD~v~~v~ 56 (219)
+++-|..+|+..+..++
T Consensus 184 aiqlak~~Ga~vi~~~~ 200 (357)
T 1zsy_A 184 VIQIAAALGLRTINVVR 200 (357)
T ss_dssp HHHHHHHHTCEEEEEEC
T ss_pred HHHHHHHcCCEEEEEec
Confidence 34555566776554443
No 498
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=20.25 E-value=84 Score=28.63 Aligned_cols=43 Identities=12% Similarity=0.191 Sum_probs=29.7
Q ss_pred HHHHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCccccee
Q psy9408 69 LLQVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQATFAS 113 (219)
Q Consensus 69 ~la~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt~v~ 113 (219)
.+++.+++-+-=+|++|....... +---.+|+++|+|+++...
T Consensus 206 ~~~~~l~~a~rpvIl~G~g~~~~~--~~l~~lae~~~~Pv~~t~~ 248 (590)
T 1ybh_A 206 QIVRLISESKKPVLYVGGGCLNSS--DELGRFVELTGIPVASTLM 248 (590)
T ss_dssp HHHHHHHHCSSEEEEECGGGTTCH--HHHHHHHHHHCCCEEECTT
T ss_pred HHHHHHHhCCCcEEEECcccccCH--HHHHHHHHHhCCCEEEchh
Confidence 344455554445888888765432 6678999999999987643
No 499
>1w2w_B 5-methylthioribose-1-phosphate isomerase; EIF2B, methionine salvage pathway, translation initiation, oxidoreductase; 1.75A {Saccharomyces cerevisiae} SCOP: c.124.1.5
Probab=20.24 E-value=1e+02 Score=24.20 Aligned_cols=62 Identities=5% Similarity=0.055 Sum_probs=36.6
Q ss_pred HHHHHHhCCCCEEEEEecCCCCCHHHHHHHHHHHHHhcC--CCEEEEcccccCCCcCc-------HHHHHHHHcCCCccc
Q psy9408 40 ILQIAMAMGVDRAILIETDTILQSLSVAKLLQVIVKKEN--PQLVILGKQSIDSDNNQ-------TGQMLAALLNWPQAT 110 (219)
Q Consensus 40 ~lr~~~a~GaD~v~~v~~~~~~d~~~~A~~la~~ik~~~--~dlVl~G~~s~d~~~~~-------v~~~lA~~Lg~p~vt 110 (219)
.++++...|.+-.+..+ .+++.++++.+ .|.||+|....-.+|+- .-+++|...+.|++-
T Consensus 22 ta~eL~~~gI~vtlI~D-----------sa~~~~m~~~~~~Vd~VivGAd~v~~nG~v~nkiGT~~~Al~Ak~~~vPf~V 90 (191)
T 1w2w_B 22 TAYELVYDKIPSTLITD-----------SSIAYRIRTSPIPIKAAFVGADRIVRNGDTANKIGTLQLAVICKQFGIKFFV 90 (191)
T ss_dssp HHHHHHHHTCCBEEBCG-----------GGHHHHHHHCSSCEEEEEECCSEECTTSCEEEETTHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHcCCCEEEEec-----------hHHHHHHHhCCCCCCEEEECccEEecCCCEEecccHHHHHHHHHHcCCCEEE
Confidence 35666677777554433 34455555555 77888887766544322 346677777777654
Q ss_pred ce
Q psy9408 111 FA 112 (219)
Q Consensus 111 ~v 112 (219)
-+
T Consensus 91 ~a 92 (191)
T 1w2w_B 91 VA 92 (191)
T ss_dssp EC
T ss_pred ec
Confidence 33
No 500
>1b73_A Glutamate racemase; isomerase; 2.30A {Aquifex pyrophilus} SCOP: c.78.2.1 c.78.2.1 PDB: 1b74_A*
Probab=20.16 E-value=2.6e+02 Score=22.30 Aligned_cols=37 Identities=11% Similarity=0.141 Sum_probs=27.5
Q ss_pred HHHHHhcCCCEEEEcccccCCCcCcHHHHHHHHcCCCccc
Q psy9408 71 QVIVKKENPQLVILGKQSIDSDNNQTGQMLAALLNWPQAT 110 (219)
Q Consensus 71 a~~ik~~~~dlVl~G~~s~d~~~~~v~~~lA~~Lg~p~vt 110 (219)
++.+.+.++|.|++++.+.. ...-..+.+.+++|++.
T Consensus 55 ~~~L~~~g~d~iviaCnTa~---~~~~~~lr~~~~iPvig 91 (254)
T 1b73_A 55 AGFLKDKGVDIIVVACNTAS---AYALERLKKEINVPVFG 91 (254)
T ss_dssp HHHHHTTTCSEEEECCHHHH---TTSHHHHHHHSSSCEEE
T ss_pred HHHHHHCCCCEEEEeCchhh---HHHHHHHHHhCCCCEEe
Confidence 34445568999999998742 22577888999999886
Done!