Your job contains 1 sequence.
>psy9409
MLTKNSPIIGIATPPGRGGVGIIRLSGKNLWSIVEIVCKKTKKQLKPRFATYSSFFCKNN
NIIDKGLVIYFKAPHSYTGEDVIELHGHGGPIILHMLLSSCLEIGKSIGLRLAMPGEFTK
RAFLNNKLDLIQVEAIIDLINASTESAAKSAMISLSGKFSKLINILLDKLINLRTLIEFS
FDFPEENQELILNKNDFFNELIKIKKKLLKIIQQGKKRALIRNGLNVVLIGQPNVGKSSL
FNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPDINSKIKKNINEVEKIG
IERTWVELKNSDIIIYVQDARYDKHTDFDKKIIKNFPMNIPVIYVWNKIDYSGHQKNINY
KNNIANIYLSASKRIGINLLRNTLLDLIEKTQTIESSPYLARERHIHSLNEANYYLSCAI
KIINQSEKNFEKNLELIAEDLRFCHEKLSSIIGKSTTNDLLDNIFSQFCIGK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy9409
(472 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|P25522 - symbol:mnmE "GTP-binding protein with ... 744 1.1e-73 1
TIGR_CMR|CBU_1922 - symbol:CBU_1922 "tRNA modification GT... 741 2.2e-73 1
TIGR_CMR|SO_0003 - symbol:SO_0003 "tRNA modification GTPa... 730 3.2e-72 1
UNIPROTKB|Q9KVY5 - symbol:mnmE "tRNA modification GTPase ... 720 3.7e-71 1
TIGR_CMR|VC_0003 - symbol:VC_0003 "thiophene and furan ox... 720 3.7e-71 1
TIGR_CMR|CPS_5049 - symbol:CPS_5049 "tRNA modification GT... 681 5.1e-67 1
TIGR_CMR|CHY_0006 - symbol:CHY_0006 "tRNA modification GT... 520 5.8e-50 1
TIGR_CMR|NSE_0717 - symbol:NSE_0717 "tRNA modification GT... 417 9.8e-50 2
TIGR_CMR|GSU_3465 - symbol:GSU_3465 "tRNA modification GT... 497 1.6e-47 1
TIGR_CMR|ECH_0060 - symbol:ECH_0060 "tRNA modification GT... 483 4.8e-46 1
TAIR|locus:2029406 - symbol:AT1G78010 species:3702 "Arabi... 482 6.2e-46 1
TIGR_CMR|CJE_1036 - symbol:CJE_1036 "tRNA modification GT... 423 7.6e-46 2
DICTYBASE|DDB_G0270228 - symbol:gtpbp3 "GTP-binding prote... 403 7.6e-46 2
TIGR_CMR|APH_1288 - symbol:APH_1288 "tRNA modification GT... 392 1.6e-45 2
ASPGD|ASPL0000007078 - symbol:AN6522 species:162425 "Emer... 415 4.7e-45 2
TIGR_CMR|BA_5734 - symbol:BA_5734 "tRNA modification GTPa... 468 1.9e-44 1
POMBASE|SPAC222.05c - symbol:mss1 "mitochondrial GTPase (... 414 4.7e-44 2
SGD|S000004625 - symbol:MSS1 "Mitochondrial protein" spec... 459 1.7e-43 1
UNIPROTKB|Q969Y2 - symbol:GTPBP3 "tRNA modification GTPas... 353 1.7e-40 2
TIGR_CMR|SPO_3895 - symbol:SPO_3895 "tRNA modification GT... 348 2.8e-40 2
RGD|1305367 - symbol:Gtpbp3 "GTP binding protein 3" speci... 346 1.5e-39 2
UNIPROTKB|P75104 - symbol:mnmE "tRNA modification GTPase ... 333 1.9e-39 2
FB|FBgn0039189 - symbol:CG18528 species:7227 "Drosophila ... 367 5.1e-39 2
ZFIN|ZDB-GENE-050522-335 - symbol:gtpbp3 "GTP binding pro... 411 2.1e-38 1
MGI|MGI:1917609 - symbol:Gtpbp3 "GTP binding protein 3" s... 340 2.2e-38 2
UNIPROTKB|E1BH64 - symbol:E1BH64 "Uncharacterized protein... 395 1.0e-36 1
CGD|CAL0004408 - symbol:orf19.2042 species:5476 "Candida ... 373 2.2e-34 1
WB|WBGene00009557 - symbol:F39B2.7 species:6239 "Caenorha... 319 1.2e-28 1
UNIPROTKB|E2RE04 - symbol:GTPBP3 "Uncharacterized protein... 235 4.1e-24 2
UNIPROTKB|Q2GDM7 - symbol:NSE_0536 "GTPase Der" species:2... 155 4.4e-08 1
TIGR_CMR|NSE_0536 - symbol:NSE_0536 "putative GTP-binding... 155 4.4e-08 1
TIGR_CMR|CHY_1919 - symbol:CHY_1919 "GTP-binding protein"... 158 4.7e-08 2
UNIPROTKB|Q81SW9 - symbol:der "GTPase Der" species:1392 "... 154 4.9e-08 1
TIGR_CMR|BA_1525 - symbol:BA_1525 "GTPase family protein"... 154 4.9e-08 1
UNIPROTKB|Q2GGW4 - symbol:engA "GTPase Der" species:20592... 151 1.1e-07 1
TIGR_CMR|ECH_0504 - symbol:ECH_0504 "GTP-binding protein ... 151 1.1e-07 1
UNIPROTKB|Q2GKV6 - symbol:der "GTPase Der" species:212042... 146 2.7e-07 2
TIGR_CMR|APH_0390 - symbol:APH_0390 "putative GTP-binding... 146 2.7e-07 2
TIGR_CMR|CJE_0435 - symbol:CJE_0435 "GTPase family protei... 146 4.2e-07 1
UNIPROTKB|Q74AX4 - symbol:der "GTPase Der" species:243231... 141 1.4e-06 1
TIGR_CMR|GSU_2225 - symbol:GSU_2225 "GTP-binding protein ... 141 1.4e-06 1
TIGR_CMR|APH_0350 - symbol:APH_0350 "GTP-binding protein ... 134 3.9e-06 1
UNIPROTKB|Q83C83 - symbol:der "GTPase Der" species:227377... 135 6.5e-06 1
TIGR_CMR|CBU_1245 - symbol:CBU_1245 "GTP-binding protein"... 135 6.5e-06 1
UNIPROTKB|P64057 - symbol:der "GTPase Der" species:1773 "... 132 1.5e-05 1
TAIR|locus:2099277 - symbol:emb2738 "embryo defective 273... 132 2.6e-05 1
UNIPROTKB|Q47WC5 - symbol:der "GTPase Der" species:167879... 130 2.8e-05 1
TIGR_CMR|CPS_4247 - symbol:CPS_4247 "GTP-binding protein ... 130 2.8e-05 1
UNIPROTKB|Q3Z6P5 - symbol:der "GTPase Der" species:243164... 129 3.0e-05 1
TIGR_CMR|DET_1395 - symbol:DET_1395 "GTP-binding protein"... 129 3.0e-05 1
TIGR_CMR|CHY_0430 - symbol:CHY_0430 "GTP-binding protein ... 124 5.0e-05 1
UNIPROTKB|P37214 - symbol:era "GTPase Era" species:210007... 124 5.0e-05 1
UNIPROTKB|Q9KTW7 - symbol:der "GTPase Der" species:243277... 126 7.6e-05 1
TIGR_CMR|VC_0763 - symbol:VC_0763 "GTP-binding protein" s... 126 7.6e-05 1
GENEDB_PFALCIPARUM|PFL0835w - symbol:PFL0835w "GTP-bindin... 129 7.8e-05 1
UNIPROTKB|Q8I5N5 - symbol:PFL0835w "GTP binding protein, ... 129 7.8e-05 1
UNIPROTKB|Q5LR04 - symbol:der "GTPase Der" species:246200... 125 9.6e-05 1
TIGR_CMR|SPO_2328 - symbol:SPO_2328 "GTP-binding protein ... 125 9.6e-05 1
ZFIN|ZDB-GENE-060526-84 - symbol:eral1 "Era G-protein-lik... 124 0.00011 1
UNIPROTKB|Q8EAH6 - symbol:hydF "Fe hydrogenase maturation... 123 0.00011 1
TIGR_CMR|SO_3926 - symbol:SO_3926 "GTP-binding protein" s... 123 0.00011 1
UNIPROTKB|Q8EC36 - symbol:der "GTPase Der" species:211586... 120 0.00034 1
TIGR_CMR|SO_3308 - symbol:SO_3308 "GTP-binding protein En... 120 0.00034 1
UNIPROTKB|P0A6P5 - symbol:der "50S ribosomal subunit stab... 120 0.00034 1
UNIPROTKB|F1P349 - symbol:ERAL1 "GTPase Era, mitochondria... 118 0.00052 1
DICTYBASE|DDB_G0288609 - symbol:eral1 "GTP-binding protei... 117 0.00053 1
>UNIPROTKB|P25522 [details] [associations]
symbol:mnmE "GTP-binding protein with a role in
modification of tRNA" species:83333 "Escherichia coli K-12"
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009268 "response to pH" evidence=IMP] [GO:0030488 "tRNA
methylation" evidence=IMP] [GO:0003924 "GTPase activity"
evidence=IEA;IDA] [GO:0005525 "GTP binding" evidence=IEA;IDA]
[GO:0006805 "xenobiotic metabolic process" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] HAMAP:MF_00379
InterPro:IPR004520 InterPro:IPR005225 InterPro:IPR006073
Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737
GO:GO:0016020 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 GO:GO:0003924 GO:GO:0009268
GO:GO:0006805 EMBL:L10328 eggNOG:COG0486 HOGENOM:HOG000200714
KO:K03650 InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631
Pfam:PF10396 TIGRFAMs:TIGR00450 OMA:PGEFSEQ ProtClustDB:PRK05291
EMBL:S57109 PIR:A38160 PIR:C65173 RefSeq:NP_418162.1
RefSeq:YP_491728.1 PDB:1RFL PDB:2GJ8 PDB:2GJ9 PDB:2GJA PDBsum:1RFL
PDBsum:2GJ8 PDBsum:2GJ9 PDBsum:2GJA ProteinModelPortal:P25522
SMR:P25522 DIP:DIP-11033N IntAct:P25522 PRIDE:P25522
EnsemblBacteria:EBESCT00000002643 EnsemblBacteria:EBESCT00000017912
GeneID:12932528 GeneID:948222 KEGG:ecj:Y75_p3466 KEGG:eco:b3706
PATRIC:32122909 EchoBASE:EB0990 EcoGene:EG10997
BioCyc:EcoCyc:EG10997-MONOMER BioCyc:ECOL316407:JW3684-MONOMER
EvolutionaryTrace:P25522 Genevestigator:P25522 GO:GO:0030488
Uniprot:P25522
Length = 454
Score = 744 (267.0 bits), Expect = 1.1e-73, P = 1.1e-73
Identities = 178/474 (37%), Positives = 254/474 (53%)
Query: 2 LTKNSPIIGIATPPGRGGVGIIRLSGKNLWSIVEIVCKKTKKQLKPRFATYSSFFCKNNN 61
++ N I+ ATPPGRGGVGI+R+SG + E V K K PR+A Y F + +
Sbjct: 1 MSDNDTIVAQATPPGRGGVGILRISGFKAREVAETVLGKLPK---PRYADYLPFKDADGS 57
Query: 62 IIDKGLVIYFKAPHSYTGEDVIELHGHGGPIILHMLLSSCLEIGKSIGLRLAMPGEFTKR 121
++D+G+ ++F P+S+TGEDV+EL GHGGP+IL +LL L I GLR+A PGEF++R
Sbjct: 58 VLDQGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKRILTIP---GLRIARPGEFSER 114
Query: 122 AFLNNKLDLIQVEAIIDLINASTESAAKSAMISLSGKFSXXXXXXXXXXXXXRTLIEFSF 181
AFLN+KLDL Q EAI DLI+AS+E AA+SA+ SL G FS R +E +
Sbjct: 115 AFLNDKLDLAQAEAIADLIDASSEQAARSALNSLQGAFSARVNHLVEALTHLRIYVEAAI 174
Query: 182 DFPEENQELILNKNDFFNEXXXXXXXXXXXXXXXXXRALIRNGLNVVLIGQPNVGKSSLF 241
DFP+E + L+ + +L+R G+ VV+ G+PN GKSSL
Sbjct: 175 DFPDEEIDF-LSDGKIEAQLNDVIADLDAVRAEARQGSLLREGMKVVIAGRPNAGKSSLL 233
Query: 242 NSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPDXXXXXXXXXXXXXXXXX 301
N+L G + AIVT IAGTTRD + + I I+ I DTAG+ +
Sbjct: 234 NALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDEVERIGIE------ 287
Query: 302 XRTWVELKNSDIIIYVQDARYDKHTDFDK---KIIKNFPMNIPVIYVWNKIDYSGHQXXX 358
R W E++ +D ++++ D D + + I P +P+ V NK D +G
Sbjct: 288 -RAWQEIEQADRVLFMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVRNKADITGETLGM 346
Query: 359 XXXXXXXXXXLSASKRIGINLLRNTLLDLIEKTQTIESSPYLARERHIHSLNEANYYLSC 418
LSA G+++LRN L + +E +LAR RH+ +L +A +L
Sbjct: 347 SEVNGHALIRLSARTGEGVDVLRNHLKQSMGFDTNMEGG-FLARRRHLQALEQAAEHLQQ 405
Query: 419 AIKIINQSEKNFEKNLELIAEDLRFCHEKLSSIIGKSTTNDLLDNIFSQFCIGK 472
+ + EL+AE+LR + LS I G+ T++DLL IFS FCIGK
Sbjct: 406 GKAQLLGAWAG-----ELLAEELRLAQQNLSEITGEFTSDDLLGRIFSSFCIGK 454
>TIGR_CMR|CBU_1922 [details] [associations]
symbol:CBU_1922 "tRNA modification GTPase TrmE"
species:227377 "Coxiella burnetii RSA 493" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] [GO:0009636 "response to toxic substance"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 PRINTS:PR00326 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0046872 GO:GO:0003924
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0006400
eggNOG:COG0486 HOGENOM:HOG000200714 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
OMA:PGEFSEQ ProtClustDB:PRK05291 EMBL:Y10436 RefSeq:NP_820899.1
ProteinModelPortal:P94612 GeneID:1209835 KEGG:cbu:CBU_1922
PATRIC:17932577 BioCyc:CBUR227377:GJ7S-1896-MONOMER Uniprot:P94612
Length = 452
Score = 741 (265.9 bits), Expect = 2.2e-73, P = 2.2e-73
Identities = 186/467 (39%), Positives = 262/467 (56%)
Query: 12 ATPPGRGGVGIIRLSGKNLWSIVEIVCKKTKKQLKPRFATYSSFFCKNNNIIDKGLVIYF 71
ATP GRGG+G++R+SG+ +I + + K PR+AT+ F + ++ID+G+ +YF
Sbjct: 13 ATPSGRGGIGVVRVSGEKTKAIAQKILGCVPK---PRYATFVKFR-DSGSVIDEGIALYF 68
Query: 72 KAPHSYTGEDVIELHGHGGPIILHMLLSSCLEIGKSIGLRLAMPGEFTKRAFLNNKLDLI 131
P+S+TGEDV+ELHGHGGP+++ LL++ L+ G R A PGEF++RAFLNNK+DL
Sbjct: 69 PKPNSFTGEDVLELHGHGGPVVMDRLLNTVLKAGA----RQARPGEFSERAFLNNKIDLA 124
Query: 132 QVEAIIDLINASTESAAKSAMISLSGKFSXXXXXXXXXXXXXRTLIEFSFDFPEENQELI 191
Q EA+ DLINAS+E AA+SAM SL G+FS R IE S DFPEE + +
Sbjct: 125 QAEAVADLINASSEQAARSAMRSLQGEFSKRIHQLVDALIQLRMYIEASIDFPEEEIDFL 184
Query: 192 LNKNDFFNEXXXXXXXXXXXXXXXXXR-ALIRNGLNVVLIGQPNVGKSSLFNSLVGSDVA 250
++ E + AL+R G+ VV+ G+PNVGKSSL N L G + A
Sbjct: 185 ADER--IKETLENLTHQVQEIEKTAKQGALLREGITVVIAGEPNVGKSSLLNLLSGQETA 242
Query: 251 IVTSIAGTTRDKITKTIQINKFLFKITDTAGIPDXXXXXXXXXXXXXXXXXXRTWVELKN 310
IVT IAGTTRD I ++I I+ + DTAG+ RT ++
Sbjct: 243 IVTDIAGTTRDIIRESIHIDGLPIHVVDTAGL-------RLTEDVVEKEGVRRTQKAVQQ 295
Query: 311 SDIIIYVQDARYDKHTDFDKKIIKN-FPMN---IPVIYVWNKIDYSGHQXXXXXXXXXXX 366
+D+++ + DA K T+ KKII F N IP + V NKID G +
Sbjct: 296 ADLLLLMIDA--SKPTEDFKKIIAQWFSENDNKIPTLIVENKIDLIG-EAPRKENKEYPH 352
Query: 367 XXLSASKRIGINLLRNTLLDLIEKTQTIESSPYLARERHIHSLNEANYYLSCAIK-IINQ 425
LS R G+ LL+N L + T E++ ++AR RH ++ A+ +L A ++NQ
Sbjct: 353 IKLSVKTRAGVELLKNHLKNTAGFEATHENN-FIARRRHCDAIARASAFLKNANNHLLNQ 411
Query: 426 SEKNFEKNLELIAEDLRFCHEKLSSIIGKSTTNDLLDNIFSQFCIGK 472
K EL+AEDL+ LS I G+ T++DLL IFS+FCIGK
Sbjct: 412 ------KAGELVAEDLKLAQNALSEITGEFTSDDLLGKIFSEFCIGK 452
>TIGR_CMR|SO_0003 [details] [associations]
symbol:SO_0003 "tRNA modification GTPase TrmE"
species:211586 "Shewanella oneidensis MR-1" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0008175 "tRNA methyltransferase
activity" evidence=ISS] [GO:0009636 "response to toxic substance"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0046872 GO:GO:0003924 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0006400 eggNOG:COG0486
HOGENOM:HOG000200714 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
ProtClustDB:PRK05291 RefSeq:NP_715645.2 ProteinModelPortal:Q8CX52
GeneID:1167901 KEGG:son:SO_0003 PATRIC:23519697 Uniprot:Q8CX52
Length = 453
Score = 730 (262.0 bits), Expect = 3.2e-72, P = 3.2e-72
Identities = 173/469 (36%), Positives = 249/469 (53%)
Query: 8 IIGIATPPGRGGVGIIRLSGKNLWSIVEIVCKKTKKQLKPRFATYSSFFCKNNNIIDKGL 67
I+ AT PGRGGVGIIR+SG ++ V K PR+A Y F + +ID+G+
Sbjct: 6 IVAQATAPGRGGVGIIRISGDKATNVAMAVLGHLPK---PRYADYCYFKSASGQVIDQGI 62
Query: 68 VIYFKAPHSYTGEDVIELHGHGGPIILHMLLSSCLEIGKSIGLRLAMPGEFTKRAFLNNK 127
++FK P+S+TGEDV+EL GHGG I+L ML+ LE+ G+R+A PGEF+++AF+N+K
Sbjct: 63 ALFFKGPNSFTGEDVLELQGHGGQIVLDMLIKRVLEVE---GIRIAKPGEFSEQAFMNDK 119
Query: 128 LDLIQVEAIIDLINASTESAAKSAMISLSGKFSXXXXXXXXXXXXXRTLIEFSFDFPEEN 187
LDL Q EAI DLI+A++E AAKSA+ SL G+FS R +E + DFP+E
Sbjct: 120 LDLTQAEAIADLIDATSEQAAKSALQSLQGEFSKEVHELVDQVTHLRLYVEAAIDFPDEE 179
Query: 188 QELILNKNDFFNEXXXXXXXXXXXXXXXXXRALIRNGLNVVLIGQPNVGKSSLFNSLVGS 247
+ L+ N ++IR G+ VV+ G+PN GKSSL N+L G
Sbjct: 180 VDF-LSDGKIANALYKIIDKLIAVQASAKQGSIIREGMKVVIAGRPNAGKSSLLNALAGK 238
Query: 248 DVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPDXXXXXXXXXXXXXXXXXXRTWVE 307
+ AIVT IAGTTRD + + I ++ I DTAG+ D R W E
Sbjct: 239 ESAIVTEIAGTTRDVLREHIHLDGMPLHIIDTAGLRDTTDTVEQIGIE-------RAWNE 291
Query: 308 LKNSDIIIYVQDAR----YDKHTDFDKKIIKNFPMNIPVIYVWNKIDYSGHQXXXXXXXX 363
+ ++D ++++ D D H D I P N+ V + NK D +G
Sbjct: 292 INSADRVLFMVDGTTTTAVDPH-DIWPDFINRLPTNLGVTVIRNKADLTGENLEMTEEKG 350
Query: 364 XXXXXLSASKRIGINLLRNTLLDLIEKTQTIESSPYLARERHIHSLNEANYYLSCAIKII 423
+SA +G++ L+ L L+ +E ++AR RH+ +L A +L +
Sbjct: 351 YSVYRISAKTGLGVDELKQHLKSLMGYQSNLEGG-FIARRRHLEALEIAASHLQ-----L 404
Query: 424 NQSEKNFEKNLELIAEDLRFCHEKLSSIIGKSTTNDLLDNIFSQFCIGK 472
+ + EL+AE+LR LS I G+ T++DLL IFS FCIGK
Sbjct: 405 GKEQLEVYLAGELLAEELRMAQLALSEITGRFTSDDLLGKIFSSFCIGK 453
>UNIPROTKB|Q9KVY5 [details] [associations]
symbol:mnmE "tRNA modification GTPase MnmE" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0009636 "response to toxic
substance" evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0046872 GO:GO:0009636
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003924 GO:GO:0006400
eggNOG:COG0486 KO:K03650 InterPro:IPR018948 InterPro:IPR025867
Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450 OMA:PGEFSEQ
ProtClustDB:PRK05291 PIR:D82375 RefSeq:NP_062587.1
ProteinModelPortal:Q9KVY5 SMR:Q9KVY5 DNASU:2614455 GeneID:2614455
KEGG:vch:VC0003 PATRIC:20079054 Uniprot:Q9KVY5
Length = 453
Score = 720 (258.5 bits), Expect = 3.7e-71, P = 3.7e-71
Identities = 172/468 (36%), Positives = 252/468 (53%)
Query: 8 IIGIATPPGRGGVGIIRLSGKNLWSIVEIVCKKTKKQLKPRFATYSSFFCKNNNIIDKGL 67
I+ AT PGRGGVGIIR+SG + + V +T L+PR+A Y F ++ +D+G+
Sbjct: 6 IVAQATAPGRGGVGIIRVSGPLAAHVAQTVTGRT---LRPRYAEYLPFTDEDGQQLDQGI 62
Query: 68 VIYFKAPHSYTGEDVIELHGHGGPIILHMLLSSCLEIGKSIGLRLAMPGEFTKRAFLNNK 127
++F PHS+TGEDV+EL GHGGP+++ ML+ L+I G+R A PGEF++RAFLN+K
Sbjct: 63 ALFFPNPHSFTGEDVLELQGHGGPVVMDMLIRRILQIK---GVRPARPGEFSERAFLNDK 119
Query: 128 LDLIQVEAIIDLINASTESAAKSAMISLSGKFSXXXXXXXXXXXXXRTLIEFSFDFPEEN 187
+DL Q EAI DLI+AS+E AAKSA+ SL G+FS R +E + DFPEE
Sbjct: 120 MDLTQAEAIADLIDASSEQAAKSALQSLQGEFSKRIHTLVESLIHLRIYVEAAIDFPEEE 179
Query: 188 QELILNKNDFFNEXXXXXXXXXXXXXXXXXRALIRNGLNVVLIGQPNVGKSSLFNSLVGS 247
+ + + + A++R G+ VV+ G+PN GKSSL N+L G
Sbjct: 180 IDFLAD-GKVSADLQTIIDNLAAVRREANQGAIMREGMKVVIAGRPNAGKSSLLNALSGK 238
Query: 248 DVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPDXXXXXXXXXXXXXXXXXXRTWVE 307
+ AIVT IAGTTRD + + I I+ I DTAG+ D R W E
Sbjct: 239 ESAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRDASDAVEKIGIE-------RAWEE 291
Query: 308 LKNSDIIIYVQDARYDKHTDFDK---KIIKNFPMNIPVIYVWNKIDYSGHQXXXXXXXXX 364
++ +D ++++ D + TD + P NI + + NK D +G
Sbjct: 292 IRQADRVLFMVDGTTTEATDPQDIWPDFVDKLPENIGITVIRNKADQTGEPLGICHVNQP 351
Query: 365 XXXXLSASKRIGINLLRNTLLDLIEKTQTIESSPYLARERHIHSLNEANYYLSCAIKIIN 424
LSA G++ LR L + + + E ++AR RH+ +L A +L+ I
Sbjct: 352 TLIRLSAKTGQGVDALRQHLKECMGFSGNQEGG-FMARRRHLDALERAAEHLA-----IG 405
Query: 425 QSEKNFEKNLELIAEDLRFCHEKLSSIIGKSTTNDLLDNIFSQFCIGK 472
Q + E++AE+LR + L+ I G+ +++DLL IFS FCIGK
Sbjct: 406 QQQLEGYMAGEILAEELRIAQQHLNEITGEFSSDDLLGRIFSSFCIGK 453
>TIGR_CMR|VC_0003 [details] [associations]
symbol:VC_0003 "thiophene and furan oxidation protein ThdF"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0009636 "response to toxic
substance" evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0046872 GO:GO:0009636
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003924 GO:GO:0006400
eggNOG:COG0486 KO:K03650 InterPro:IPR018948 InterPro:IPR025867
Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450 OMA:PGEFSEQ
ProtClustDB:PRK05291 PIR:D82375 RefSeq:NP_062587.1
ProteinModelPortal:Q9KVY5 SMR:Q9KVY5 DNASU:2614455 GeneID:2614455
KEGG:vch:VC0003 PATRIC:20079054 Uniprot:Q9KVY5
Length = 453
Score = 720 (258.5 bits), Expect = 3.7e-71, P = 3.7e-71
Identities = 172/468 (36%), Positives = 252/468 (53%)
Query: 8 IIGIATPPGRGGVGIIRLSGKNLWSIVEIVCKKTKKQLKPRFATYSSFFCKNNNIIDKGL 67
I+ AT PGRGGVGIIR+SG + + V +T L+PR+A Y F ++ +D+G+
Sbjct: 6 IVAQATAPGRGGVGIIRVSGPLAAHVAQTVTGRT---LRPRYAEYLPFTDEDGQQLDQGI 62
Query: 68 VIYFKAPHSYTGEDVIELHGHGGPIILHMLLSSCLEIGKSIGLRLAMPGEFTKRAFLNNK 127
++F PHS+TGEDV+EL GHGGP+++ ML+ L+I G+R A PGEF++RAFLN+K
Sbjct: 63 ALFFPNPHSFTGEDVLELQGHGGPVVMDMLIRRILQIK---GVRPARPGEFSERAFLNDK 119
Query: 128 LDLIQVEAIIDLINASTESAAKSAMISLSGKFSXXXXXXXXXXXXXRTLIEFSFDFPEEN 187
+DL Q EAI DLI+AS+E AAKSA+ SL G+FS R +E + DFPEE
Sbjct: 120 MDLTQAEAIADLIDASSEQAAKSALQSLQGEFSKRIHTLVESLIHLRIYVEAAIDFPEEE 179
Query: 188 QELILNKNDFFNEXXXXXXXXXXXXXXXXXRALIRNGLNVVLIGQPNVGKSSLFNSLVGS 247
+ + + + A++R G+ VV+ G+PN GKSSL N+L G
Sbjct: 180 IDFLAD-GKVSADLQTIIDNLAAVRREANQGAIMREGMKVVIAGRPNAGKSSLLNALSGK 238
Query: 248 DVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPDXXXXXXXXXXXXXXXXXXRTWVE 307
+ AIVT IAGTTRD + + I I+ I DTAG+ D R W E
Sbjct: 239 ESAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRDASDAVEKIGIE-------RAWEE 291
Query: 308 LKNSDIIIYVQDARYDKHTDFDK---KIIKNFPMNIPVIYVWNKIDYSGHQXXXXXXXXX 364
++ +D ++++ D + TD + P NI + + NK D +G
Sbjct: 292 IRQADRVLFMVDGTTTEATDPQDIWPDFVDKLPENIGITVIRNKADQTGEPLGICHVNQP 351
Query: 365 XXXXLSASKRIGINLLRNTLLDLIEKTQTIESSPYLARERHIHSLNEANYYLSCAIKIIN 424
LSA G++ LR L + + + E ++AR RH+ +L A +L+ I
Sbjct: 352 TLIRLSAKTGQGVDALRQHLKECMGFSGNQEGG-FMARRRHLDALERAAEHLA-----IG 405
Query: 425 QSEKNFEKNLELIAEDLRFCHEKLSSIIGKSTTNDLLDNIFSQFCIGK 472
Q + E++AE+LR + L+ I G+ +++DLL IFS FCIGK
Sbjct: 406 QQQLEGYMAGEILAEELRIAQQHLNEITGEFSSDDLLGRIFSSFCIGK 453
>TIGR_CMR|CPS_5049 [details] [associations]
symbol:CPS_5049 "tRNA modification GTPase TrmE"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0046872 GO:GO:0003924 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0006400 eggNOG:COG0486
HOGENOM:HOG000200714 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
HSSP:Q9WYA4 OMA:PGEFSEQ ProtClustDB:PRK05291 RefSeq:YP_271687.1
ProteinModelPortal:Q47U36 SMR:Q47U36 STRING:Q47U36 GeneID:3518638
KEGG:cps:CPS_5049 PATRIC:21472877
BioCyc:CPSY167879:GI48-5049-MONOMER Uniprot:Q47U36
Length = 471
Score = 681 (244.8 bits), Expect = 5.1e-67, P = 5.1e-67
Identities = 177/488 (36%), Positives = 254/488 (52%)
Query: 2 LTKNSPIIGIATPPGRGGVGIIRLSGKNLWSIVEIVCKKTKKQLKPRFATYSSFF-CKNN 60
+++ + I AT PGRGGVGIIR+SG ++ + + K + K A Y F C +
Sbjct: 4 ISQTTTIAAQATAPGRGGVGIIRVSGPEAKNVAQAILGKLPEVRK---AEYLPFLDCTST 60
Query: 61 N---IIDKGLVIYFKAPHSYTGEDVIELHGHGGPIILHMLLSSCLEIGKSIGLRLAMPGE 117
+ ++D+G+ +YFKAP+S+TGEDVIE GHGGP+IL MLL L K I +A PGE
Sbjct: 61 DKTQVLDQGIALYFKAPNSFTGEDVIEFQGHGGPVILDMLLKVILAQPKVI---MAKPGE 117
Query: 118 FTKRAFLNNKLDLIQVEAIIDLINASTESAAKSAMISLSGKFSXXXXXXXXXXXXXRTLI 177
F+++AFLN+KLDL Q EAI DLIN+S+E AA+SA+ SL G FS R +
Sbjct: 118 FSEQAFLNDKLDLTQAEAIADLINSSSEQAARSALHSLQGDFSKLVNEMVESIIHLRMYV 177
Query: 178 EFSFDFPEENQELILNKNDFFNEXXXXXXXXXXXXXXXXXRALIRNGLNVVLIGQPNVGK 237
E + DFPEE + + +K + ++IR G+ VV+ G+PN GK
Sbjct: 178 EAAIDFPEEEIDFLADKK-IVTDLKAIISRVEDVRKQAQQGSIIREGMRVVIAGRPNAGK 236
Query: 238 SSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPDXXXXXXXXXXXXX 297
SSL N+L G AIVT IAGTTRD + + I I+ I DTAG+ D
Sbjct: 237 SSLLNALSGKQTAIVTDIAGTTRDVLAEQIHIDGMPLHIIDTAGLRDSDDVVEKIGIE-- 294
Query: 298 XXXXXRTWVELKNSDIIIYVQDARYDKHTDFDKKIIKNF--------PMNIPVIYVWNKI 349
R W E+ +D ++ + DA D D + IK+F P I + + NK
Sbjct: 295 -----RAWQEINQADRVLLMVDASEDHSILEDDQDIKDFYPEFFAKLPEKIGLTLIRNKA 349
Query: 350 DYS----GH-QXXXXXXXXXXXXXLSASKRIGINLLRNTLLDLIEKTQTIESSPYLARER 404
D + G + LSA G++ L+ L ++ E ++AR R
Sbjct: 350 DVNDAKTGFTEFTDTDGTQHAIITLSAKTGKGVDSLKEHLKTIMGYQGGTEGG-FMARRR 408
Query: 405 HIHSLNEANYYLSCAIKIINQSEKNFEKNLELIAEDLRFCHEKLSSIIGKSTTNDLLDNI 464
H+ +L + +L + +Q E E++AE+LR C ++L I G+ T++DLL I
Sbjct: 409 HLVALENTHQHLLTGL---DQLESYVAG--EILAEELRICQQELDQITGEFTSDDLLGKI 463
Query: 465 FSQFCIGK 472
FS FCIGK
Sbjct: 464 FSSFCIGK 471
>TIGR_CMR|CHY_0006 [details] [associations]
symbol:CHY_0006 "tRNA modification GTPase TrmE"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0006400 "tRNA
modification" evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0003924 GO:GO:0006400
eggNOG:COG0486 KO:K03650 InterPro:IPR018948 InterPro:IPR025867
Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450 HSSP:Q9WYA4
OMA:PGEFSEQ HOGENOM:HOG000200713 RefSeq:YP_358878.1
ProteinModelPortal:Q3AG56 STRING:Q3AG56 GeneID:3727714
KEGG:chy:CHY_0006 PATRIC:21273213 BioCyc:CHYD246194:GJCN-6-MONOMER
Uniprot:Q3AG56
Length = 461
Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
Identities = 152/475 (32%), Positives = 229/475 (48%)
Query: 8 IIGIATPPGRGGVGIIRLSGKN-LWSIVEIVCKKTKKQLK--PRFATYSSFFCK--NNNI 62
I I+TP G GG+GI+R+SG + ++ + + K L P F + + I
Sbjct: 6 IAAISTPLGEGGIGIVRVSGPGAIEAVKNVFIPRQSKDLSKVPSFTLHYGKIVDPADGKI 65
Query: 63 IDKGLVIYFKAPHSYTGEDVIELHGHGGPIILHMLLSSCLEIGKSIGLRLAMPGEFTKRA 122
+D+ LV +AP SYTGEDV+E++ HGG + + +L L+ G +RLA PGEFTKRA
Sbjct: 66 VDEVLVSVMRAPKSYTGEDVVEINCHGGIVAVEKVLELILKQG----IRLAEPGEFTKRA 121
Query: 123 FLNNKLDLIQVEAIIDLINASTESAAKSAMISLSGKFSXXXXXXXXXXXXXRTLIEFSFD 182
FLN ++DL Q EA+ID+I A TE++ K A LSG+ IE S D
Sbjct: 122 FLNGRIDLSQAEAVIDIIRAKTEASLKLAGRQLSGELREKINAVRQKIINILAFIEVSID 181
Query: 183 FPEENQELILNKNDFFNEXXXXXXXXXXXXXXXXXRALIRNGLNVVLIGQPNVGKSSLFN 242
+PE + + + N R ++R G+ V+ G+PNVGKSSL N
Sbjct: 182 YPEYEFDEVTPETALKNIDEIINDVRRLLSSYERGR-ILREGITAVIAGKPNVGKSSLLN 240
Query: 243 SLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPDXXXXXXXXXXXXXXXXXX 302
+L+ AIVT I GTTRD I + + KI DTAGI +
Sbjct: 241 ALLRKKRAIVTDIPGTTRDVIEDYLNLKGIPVKIVDTAGIRETEDLVEKLGVE------- 293
Query: 303 RTWVELKNSDIIIYVQDARYDKHTDFDKKIIKNFPMNIPVIYVWNKIDY-SGH---QXXX 358
+T L +D+ ++V D D D+KI+ + ++ + NKID G +
Sbjct: 294 KTREYLNQADVTLFVVDVSIGIDED-DEKILSLINKDKSLLVI-NKIDLLQGKVNFEQYA 351
Query: 359 XXXXXXXXXXLSASKRIGINLLRNTLLDLIEKTQTIES-SPYLARERHIHSLNEANYYLS 417
SA G+ +L N L +++ Q E S ++ RH + L +A L
Sbjct: 352 VKTGIKNFVPFSARNFEGLEILENKLYEILIPEQEGEGESALISNLRHKNYLEKALNSLL 411
Query: 418 CAIKIINQSEKNFEKNLELIAEDLRFCHEKLSSIIGKSTTNDLLDNIFSQFCIGK 472
A + I E ++L+A DL +L +I G + +++++ IFSQFC+GK
Sbjct: 412 SAKESIASGEP-----VDLVAIDLNEALRELGAITGDALGDEIINEIFSQFCVGK 461
>TIGR_CMR|NSE_0717 [details] [associations]
symbol:NSE_0717 "tRNA modification GTPase TrmE"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003924
"GTPase activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR003593 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 SMART:SM00382
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0046872
GO:GO:0003924 GO:GO:0006400 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0486 HOGENOM:HOG000200714 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
RefSeq:YP_506593.1 ProteinModelPortal:Q2GD53 STRING:Q2GD53
GeneID:3931628 KEGG:nse:NSE_0717 PATRIC:22681449 OMA:IEAHIIT
ProtClustDB:CLSK2528116 BioCyc:NSEN222891:GHFU-729-MONOMER
Uniprot:Q2GD53
Length = 550
Score = 417 (151.9 bits), Expect = 9.8e-50, Sum P(2) = 9.8e-50
Identities = 101/280 (36%), Positives = 148/280 (52%)
Query: 6 SPIIGIATPPGRGGVGIIRLSGKNLWSIVEIVCKKTKKQLKPRFATYSSFFCKNNNIIDK 65
S I ++T G+ GV + R+SG + +E++ K Q +PRF ++ F +ID+
Sbjct: 2 STIYALSTVFGKSGVAVFRISGPDALRALELLGLDIK-QPRPRFVYFARLF-DEQLLIDE 59
Query: 66 GLVIYFKAPHSYTGEDVIELHGHGGPIILHMLLSSCLEIGKSIGLRLAMPGEFTKRAFLN 125
LV+YF +P S+TGEDV+ELH HG +L + + K A PGEFT+RA LN
Sbjct: 60 VLVVYFASPASFTGEDVVELHSHGSIAVLRYISEKLSTLFKP-----AEPGEFTRRAVLN 114
Query: 126 NKLDLIQVEAIIDLINASTESAAKSAMISLSGKFSXXXXXXXXXXXXXRTLIEFSFDFPE 185
N++DL + E IID+IN+ T+ K A LSGK + + +E DFP+
Sbjct: 115 NRMDLTKAEGIIDIINSETQEQLKQASRHLSGKLAEEYNSLRDKIIKVLSYLEAYIDFPD 174
Query: 186 EN-QELILNKNDFFNEXXXXXXXXXXXXXXXXXRALIRNGLNVVLIGQPNVGKSSLFNSL 244
E E +L + IR G +VV++G+PNVGKS+LFN L
Sbjct: 175 EEIPETVLA--EIQQSIVAIQCDISRYLADGKVGEKIREGFSVVIVGKPNVGKSTLFNYL 232
Query: 245 VGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPD 284
D+AIVT I GTTRD + + + + ++DTAGI +
Sbjct: 233 AKRDLAIVTDIPGTTRDILEVRLDCHGYPVILSDTAGIQE 272
Score = 118 (46.6 bits), Expect = 9.8e-50, Sum P(2) = 9.8e-50
Identities = 40/135 (29%), Positives = 64/135 (47%)
Query: 338 MNIPVIYVWNKIDYSGHQXXXXXXXXXXXXXLSASKRIGINLLRNTLLDLIEKTQTIESS 397
+ IPV+ V K D + Q +S K G+ LL + + D+I + IE+
Sbjct: 429 LEIPVVKVVTKGDIAPTQLSFWQDKGYIC--ISVYKGEGMQLLLDKIFDIISSSN-IEAH 485
Query: 398 PYLARERHIHSLNEANYYLSCAIKIINQSEKNFEKNLELIAEDLRFCHEKLSSIIGKSTT 457
+ R RH +L A +L N + +EL AE+++ ++S+ G+
Sbjct: 486 -IITRARHRLALENALEHLR---------RFNTDLPIELAAEEIKLAANHIASVTGEIKL 535
Query: 458 NDLLDNIFSQFCIGK 472
+D+LD IFS FCIGK
Sbjct: 536 DDVLDEIFSSFCIGK 550
>TIGR_CMR|GSU_3465 [details] [associations]
symbol:GSU_3465 "tRNA modification GTPase TrmE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0046872 GO:GO:0003924 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0006400 HSSP:Q9X1F8 eggNOG:COG0486
KO:K03650 InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631
Pfam:PF10396 TIGRFAMs:TIGR00450 OMA:PGEFSEQ ProtClustDB:PRK05291
HOGENOM:HOG000200713 RefSeq:NP_954505.1 ProteinModelPortal:Q746Q3
GeneID:2686588 KEGG:gsu:GSU3465 PATRIC:22029787
BioCyc:GSUL243231:GH27-3432-MONOMER Uniprot:Q746Q3
Length = 456
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 144/469 (30%), Positives = 222/469 (47%)
Query: 8 IIGIATPPGRGGVGIIRLSGKNLWSIVEIVCKK-TKKQLKPRFATYSSFF-CKNNNIIDK 65
I I+T G GGVGI+R+SG + SI V ++ + + Y S +D+
Sbjct: 7 IAAISTAAGEGGVGIVRVSGPDAPSIARRVFRRGSNGDFESHRFYYGSVVDAVTGEAVDE 66
Query: 66 GLVIYFKAPHSYTGEDVIELHGHGGPIILHMLLSSCLEIGKSIGLRLAMPGEFTKRAFLN 125
+ + P SYT EDV+E+ HGG ++ +L E+ + G RLA PGEFT+RAFLN
Sbjct: 67 AMAVLMVRPRSYTREDVLEIQCHGGYLVTRRVL----ELVLAAGARLAEPGEFTRRAFLN 122
Query: 126 NKLDLIQVEAIIDLINASTESAAKSAMISLSGKFSXXXXXXXXXXXXXRTLIEFSFDFPE 185
++DL+Q EA+ID+I A T++A A G+ S L+E DFPE
Sbjct: 123 GRIDLVQAEAVIDVIRAKTDAALALAQHQRQGRLSQRLDTVMAELRQALALVEAFIDFPE 182
Query: 186 ENQELILNKNDFFNEXXXXXXXXXXXXXXXXXRALIRNGLNVVLIGQPNVGKSSLFNSLV 245
++ + + R L R G+ V++ G+PNVGKSSL N+L+
Sbjct: 183 DDIDPAAQDALTVHVRKAAETVGELIAGFDEGRVL-REGVAVLIAGKPNVGKSSLLNTLL 241
Query: 246 GSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPDXXXXXXXXXXXXXXXXXXRTW 305
AIVTS+ GTTRD I + + I ++ DTAGI D T
Sbjct: 242 QEKRAIVTSVPGTTRDIIEEVVNIRGLPLRMIDTAGIRDTEDIVEKEGVRL-------TL 294
Query: 306 VELKNSDIIIYVQDARYDKHTDFDKKIIKNFPMNIPVIYVWNKIDYSGHQXXXXXXXXXX 365
++ +D+++ V D + D D ++I + +I V NK D
Sbjct: 295 EKIPEADLVLLVIDG--SRPLDEDDRMILSALAGKRLILVENKCDLPRAVQIPDELVLMP 352
Query: 366 XXXLSASKRIGINLLRNTLLDLIEKTQTIESSPYLA--RERHIHSLNEANYYLSCAIKII 423
+S S+ GI+ L+ ++ I+S Y+A R RH L+ + +L+ + +
Sbjct: 353 RVTVSTSRGDGIDELKESIFQTFIHGAAIDSREYVAVSRVRHRDLLSRSTMHLTAFEQGL 412
Query: 424 NQSEKNFEKNLELIAEDLRFCHEKLSSIIGKSTTNDLLDNIFSQFCIGK 472
F LEL+A +LR + + G++T +D+LD IF +FCIGK
Sbjct: 413 ---ASGF--TLELLAVELRDALAAVGEVTGETTPDDILDVIFDRFCIGK 456
>TIGR_CMR|ECH_0060 [details] [associations]
symbol:ECH_0060 "tRNA modification GTPase TrmE"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0003924
"GTPase activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR
GO:GO:0003924 GO:GO:0006400 eggNOG:COG0486 HOGENOM:HOG000200714
KO:K03650 InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631
Pfam:PF10396 TIGRFAMs:TIGR00450 ProtClustDB:PRK05291 OMA:IDFPEEV
RefSeq:YP_506891.1 ProteinModelPortal:Q2GI42 STRING:Q2GI42
GeneID:3927317 KEGG:ech:ECH_0060 PATRIC:20575687
BioCyc:ECHA205920:GJNR-60-MONOMER Uniprot:Q2GI42
Length = 439
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 148/458 (32%), Positives = 228/458 (49%)
Query: 8 IIGIATPPGRGGVGIIRLSGKNLWSIVEIVCKKTKKQLKPRFATYSSFFCKNNNIIDKGL 67
I + TP GR GV +IR+SG++ + V +KPR AT++ + K+ +ID+ +
Sbjct: 4 IFALCTPWGRSGVAVIRISGED--AAKAFVHFGINSSIKPRTATFTPLYDKDGEVIDEAI 61
Query: 68 VIYFKAPHSYTGEDVIELHGHGGPIILHMLLSSCLEIGKSIGLRLAMPGEFTKRAFLNNK 127
V+YF AP+S+TGEDV+E H HG ++ M+L+ E+GK I + A PGEF+ RAFLNNK
Sbjct: 62 VVYFVAPNSFTGEDVVEFHTHGSFAVIKMILA---ELGK-IFVP-AGPGEFSLRAFLNNK 116
Query: 128 LDLIQVEAIIDLINASTESAAKSAMISLSGKFSXXXXXXXXXXXXXRTLIEFSFDFPEE- 186
+DL + EAI+DLIN+ TE AK A+ +SG + IE DFPEE
Sbjct: 117 VDLTRAEAIVDLINSETEMQAKQAIRQMSGVLEKLYQNWRQQLIDILSNIEAYIDFPEEV 176
Query: 187 NQELILNKNDFFNEXXXXXXXXXXXXXXXXXRALIRNGLNVVLIGQPNVGKSSLFNSLVG 246
N I N + N +R G+ V ++G+PN GKS+LFN L
Sbjct: 177 NSSAIANIDYLLNNLQKSLESHLNDDRRGER---LRQGIYVTILGEPNSGKSTLFNHLAK 233
Query: 247 SDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPDXXXXXXXXXXXXXXXXXXRTWV 306
D+AIV+ AGTTRD + I + + I DTAGI + R +
Sbjct: 234 RDIAIVSEYAGTTRDPLEAHIDVAGYPIIIIDTAGIRESTDPVEQEGIK-------RAKL 286
Query: 307 ELKNSDIIIYVQDARYDKHTDFDKKIIKNFPMNIPVIYVWNKIDYSGHQXXXXXXXXXXX 366
+ +N+D I + Y+K F+++I+ ++ I + +K D Q
Sbjct: 287 KAENADFKIVMLP--YEKRDIFNREIMSL--IDDKSICILSKADNITDQKLIPVFDFSFI 342
Query: 367 XXLSASKRIGINLLRNTLLDLIEKT-QTIESSPYLARER---HI-HSLNEANYY-LSCAI 420
+S IGI L N + +EK Q + P++ ER HI ++LN LS +
Sbjct: 343 P-ISVYCNIGIENLLNLIKQKVEKDFQFCNTDPFITSERQRKHIQNTLNIIKSVDLSLPM 401
Query: 421 KIINQ----SEKNFEKNLELIAEDLRFCHEKLSSIIGK 454
+I+++ S + K + +I++D + L ++ GK
Sbjct: 402 EIVSEDLRLSVRELGKVVGVISDD-----DILDNVFGK 434
Score = 128 (50.1 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 47/172 (27%), Positives = 81/172 (47%)
Query: 303 RTWVELKNSDIIIYVQDARYDKHTDFDKKIIKNFPMNIPVIYVWNKIDYSGHQXXXXXXX 362
R ++ +N+D I + Y+K F+++I+ ++ I + +K D Q
Sbjct: 283 RAKLKAENADFKIVMLP--YEKRDIFNREIMSL--IDDKSICILSKADNITDQKLIPVFD 338
Query: 363 XXXXXXLSASKRIGINLLRNTLLDLIEKT-QTIESSPYLARERHI-HSLNEANYYLSCAI 420
+S IGI L N + +EK Q + P++ ER H N N I
Sbjct: 339 FSFIP-ISVYCNIGIENLLNLIKQKVEKDFQFCNTDPFITSERQRKHIQNTLNI-----I 392
Query: 421 KIINQSEKNFEKNLELIAEDLRFCHEKLSSIIGKSTTNDLLDNIFSQFCIGK 472
K ++ S +E+++EDLR +L ++G + +D+LDN+F +FCIGK
Sbjct: 393 KSVDLSLP-----MEIVSEDLRLSVRELGKVVGVISDDDILDNVFGKFCIGK 439
>TAIR|locus:2029406 [details] [associations]
symbol:AT1G78010 species:3702 "Arabidopsis thaliana"
[GO:0003924 "GTPase activity" evidence=IEA;ISS] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006184 "GTP catabolic
process" evidence=IEA] [GO:0006400 "tRNA modification"
evidence=IEA;ISS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006897 "endocytosis" evidence=RCA]
HAMAP:MF_00379 InterPro:IPR001806 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 PRINTS:PR00449
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0007264 GO:GO:0003924 GO:GO:0005622
GO:GO:0006400 eggNOG:COG0486 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
HOGENOM:HOG000200713 OMA:IDFPEEV EMBL:BT015351 EMBL:BT015722
IPI:IPI00546429 RefSeq:NP_177924.3 UniGene:At.21626
ProteinModelPortal:Q66GQ1 SMR:Q66GQ1 STRING:Q66GQ1 PaxDb:Q66GQ1
PRIDE:Q66GQ1 EnsemblPlants:AT1G78010.1 GeneID:844136
KEGG:ath:AT1G78010 TAIR:At1g78010 InParanoid:Q66GQ1
PhylomeDB:Q66GQ1 ProtClustDB:CLSN2680810 Genevestigator:Q66GQ1
Uniprot:Q66GQ1
Length = 560
Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
Identities = 149/490 (30%), Positives = 227/490 (46%)
Query: 5 NSPIIGIATPPGR--GGVGIIRLSGKNLWSIVEIV---CKKTKKQ------LKPR--FAT 51
+S I+ I TP G G VGI+RLSG + V KKTKK+ +P+ F
Sbjct: 91 SSTIVAIVTPIGGPPGAVGIVRLSGPKAVEVARRVFRSAKKTKKKESDSDTWRPKSHFVE 150
Query: 52 YSSFFCKNNNIIDKGLVIYFKAPHSYTGEDVIELHGHGGPIILHMLLSSCLEIGKSIGLR 111
Y + N N++D+ L + AP SYT EDV+EL HG + L +L +C+E G R
Sbjct: 151 YGAVVDSNGNVVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRTCVEAGA----R 206
Query: 112 LAMPGEFTKRAFLNNKLDLIQVEAIIDLINASTESAAKSAMISLSGKFSXXXXXXXXXXX 171
LA PGEFT RAFLN +LDL Q E + LI+A + +AA +A+ + G FS
Sbjct: 207 LAEPGEFTLRAFLNGRLDLSQAENVEKLISAKSSAAADAALEGIQGGFSSLVKSLRAQCI 266
Query: 172 XXRTLIEFSFDFPEENQELILNKNDFFNEXXXXXXXXXXXXXXXXXRALIRNGLNVVLIG 231
T IE DF +E L + N+ L+++GL + ++G
Sbjct: 267 ELLTEIEARLDFEDEMPPLDIES--VINKITSMSQDVESALDTANYDKLLQSGLQIAIVG 324
Query: 232 QPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPDXXXXXXX 291
+PNVGKSSL N+ S+ AIVT +AGTTRD + + + + DTAGI +
Sbjct: 325 RPNVGKSSLLNAWSKSERAIVTEVAGTTRDVVEANVTVRGVPITLLDTAGIRETNDIVEK 384
Query: 292 XXXXXXXXXXXRTWVELKNSDIIIYVQDARYDKHTDFDKKIIKNFPMNIPVIYVWNKIDY 351
R+ K +D+II A + T+ D ++++ + P+I V NKID
Sbjct: 385 IGVE-------RSETAAKVADVIIMAVSA-VEGWTEEDTELLRKIQSDKPMILVMNKIDC 436
Query: 352 S--G-----HQXXXXXXXXXXXXXLSASKRIGINLLRNTLLDLI--EKTQTIESSPYLAR 402
+ G SA GI L + +L+++ ++ T +
Sbjct: 437 APPGSCDQLEDQRKKEEVFHKSVFTSAVTGQGIEELEDAILEILGLDRVPT-GGHQWTVN 495
Query: 403 ERHIHSLNEANYYLSCAIKIINQSEKNFEKNLELIAEDLRFCHEKLSSIIGKSTTNDLLD 462
+R L L +++ E E ++ +LR L+ I G+ + ++L
Sbjct: 496 QRQCEQLVRTKEAL---VRLREAIED--EIPIDFWTIELREAALSLAQISGQDVSEEVLS 550
Query: 463 NIFSQFCIGK 472
+IF++FCIGK
Sbjct: 551 SIFAKFCIGK 560
>TIGR_CMR|CJE_1036 [details] [associations]
symbol:CJE_1036 "tRNA modification GTPase TrmE"
species:195099 "Campylobacter jejuni RM1221" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0046872 GO:GO:0003924 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0006400 HSSP:Q9X1F8 eggNOG:COG0486
KO:K03650 InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631
Pfam:PF10396 TIGRFAMs:TIGR00450 OMA:PGEFSEQ ProtClustDB:PRK05291
HOGENOM:HOG000200713 RefSeq:YP_179032.1 ProteinModelPortal:Q5HUK3
STRING:Q5HUK3 GeneID:3231546 KEGG:cjr:CJE1036 PATRIC:20043873
BioCyc:CJEJ195099:GJC0-1063-MONOMER Uniprot:Q5HUK3
Length = 442
Score = 423 (154.0 bits), Expect = 7.6e-46, Sum P(2) = 7.6e-46
Identities = 114/346 (32%), Positives = 175/346 (50%)
Query: 8 IIGIATPPGRGGVGIIRLSGKNLWSIVEIVCKKTKKQLKPRFATYSSFFCKNNNIIDKGL 67
I IAT G G + I+RLSG+ + KTK L PR AT++ F +NN IID+ +
Sbjct: 5 IAAIATAHGVGSISIVRLSGERALEFALKLSHKTK--LTPRHATFTKLFNQNNEIIDEAI 62
Query: 68 VIYFKAPHSYTGEDVIELHGHGGPIILHMLLSSCLEIGKSIGLRLAMPGEFTKRAFLNNK 127
+IYFKAP+S+TGED++E HGG + +LL + S+G RLA+ GEF+KRA LN K
Sbjct: 63 MIYFKAPYSFTGEDIVEFQIHGGFSVSEVLLEELV----SLGARLALAGEFSKRACLNGK 118
Query: 128 LDLIQVEAIIDLINASTESAAKSAMISLSGKFSXXXXXXXXXXXXXRTLIEFSFDFPEEN 187
+ ++ I DLI + + AAK ++ G +E S D+ +++
Sbjct: 119 MTPLKALNIQDLILSKSALAAKIIARNMQGNLGELLEKIRTDLVKTLAFVETSIDYADDD 178
Query: 188 --QELILNKNDFFNEXXXXXXXXXXXXXXXXXRALIRNGLNVVLIGQPNVGKSSLFNSLV 245
+L+ + E + LI G + ++G+PNVGKSSL N+L+
Sbjct: 179 LPSDLLEQISTMCEENSKILKEIYTLSQSK--KGLIE-GFKIAIVGKPNVGKSSLLNALL 235
Query: 246 GSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPDXXXXXXXXXXXXXXXXXXRTW 305
+ AIV+ IAGTTRD I ++ ++ L +I DTAGI +
Sbjct: 236 SYERAIVSDIAGTTRDTIEESFKLGTHLLRIIDTAGIRESKDVIEQIGVALSKKS----- 290
Query: 306 VELKNSDIIIYVQDARYDKHTDFDKKIIKNFP-MNIPVIYVWNKID 350
L+++DII+ V DA + + D+KI + + ++ NK D
Sbjct: 291 --LEDADIILAVFDASRVQDKE-DEKIFDLLANTDKKIFWILNKSD 333
Score = 75 (31.5 bits), Expect = 7.6e-46, Sum P(2) = 7.6e-46
Identities = 40/166 (24%), Positives = 70/166 (42%)
Query: 308 LKNSDIIIYVQDARYDKHTDFDKKIIKNFP-MNIPVIYVWNKIDYSGHQXXXXXXXXXXX 366
L+++DII+ V DA + + D+KI + + ++ NK D +
Sbjct: 291 LEDADIILAVFDASRVQDKE-DEKIFDLLANTDKKIFWILNKSDL---ENVFKNTQNKNF 346
Query: 367 XXLSASKRIGINLLRNTLLDLIEKTQTIESSPYLARERHIHSLNEANYYLSCAIKIINQS 426
LSA K I LL+ L + + + +S + + SL+ N + I
Sbjct: 347 IKLSAQK--DITLLKEELQNYLN---SFDSEGIM-----VSSLDLINACKISSEAIFRAK 396
Query: 427 EKNFEKNLELIAEDLRFCHEKLSSIIGKSTTNDLLDNIFSQFCIGK 472
E +LEL A +L +L+ +++LD +F FC+GK
Sbjct: 397 GLLEESSLELFAFELNLAINELARFTKDFQRDEILDEMFGNFCLGK 442
>DICTYBASE|DDB_G0270228 [details] [associations]
symbol:gtpbp3 "GTP-binding protein 3" species:44689
"Dictyostelium discoideum" [GO:0006400 "tRNA modification"
evidence=IEA;ISS] [GO:0006184 "GTP catabolic process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA;ISS] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 dictyBase:DDB_G0270228
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003924 GO:GO:0006400 HSSP:P25522
eggNOG:COG0486 KO:K03650 InterPro:IPR018948 InterPro:IPR025867
Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450 RefSeq:XP_646629.1
ProteinModelPortal:Q55C52 STRING:Q55C52 EnsemblProtists:DDB0267051
GeneID:8617601 KEGG:ddi:DDB_G0270228 OMA:IRISGTH
ProtClustDB:CLSZ2431449 Uniprot:Q55C52
Length = 512
Score = 403 (146.9 bits), Expect = 7.6e-46, Sum P(2) = 7.6e-46
Identities = 99/281 (35%), Positives = 149/281 (53%)
Query: 8 IIGIATPPGRGGVGIIRLSGKNLWSIVEIVCKKT----KKQLKPRFATYSSFFC-KNNNI 62
I +++ G+ GV IIR+SG +++ + KK+ +++K R+AT S+F+ K N
Sbjct: 28 IYNLSSGVGKSGVAIIRVSGPQAETVIRKLIKKSDVDKNEEIKSRYATLSTFYNPKTNEQ 87
Query: 63 IDKGLVIYFKAPHSYTGEDVIELHGHGGPIILHMLLSSCLEIGKSIGLRLAMPGEFTKRA 122
+DKG+ I+F +P+S+TGEDV+E H HGG +++ + + IG G R + GEFTKRA
Sbjct: 88 LDKGMFIWFPSPNSFTGEDVVEFHIHGGRAVIYETMEA---IGLIEGTRPSEQGEFTKRA 144
Query: 123 FLNNKLDLIQVEAIIDLINASTESAAKSAMISLSGKFSXXXXXXXXXXXXXRTLIEFSFD 182
F N K+DL QVE + DL++AST K A+ + G S +E D
Sbjct: 145 FENGKMDLTQVEGLSDLLDASTSFQKKIALKQMQGSISEFYLSLRKDLIRASAYMEAFID 204
Query: 183 FPEENQELILNKNDFFNEXXXXXXXXXXXXXXXXXRA-LIRNGLNVVLIGQPNVGKSSLF 241
F ++ EL D R +R+G N+ ++G PN GKSSL
Sbjct: 205 FGDD-AELDPEIVDQSRNRIISIRDKIQQHLNDGKRGERLRDGANIAIVGPPNAGKSSLI 263
Query: 242 NSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGI 282
N L +IV+ IAGTTRD + + I+ + I DTAG+
Sbjct: 264 NLLTNRKASIVSPIAGTTRDIVEVILDIDGYPVIIGDTAGL 304
Score = 95 (38.5 bits), Expect = 7.6e-46, Sum P(2) = 7.6e-46
Identities = 33/96 (34%), Positives = 49/96 (51%)
Query: 377 INLLRNTLLDLIEKTQTIESSPYLARERHIHSLNEANYYLSCAIKIINQSEKNFEKNLEL 436
+NLL+ L +L E Q ES P L R R+ +LS ++ +++ E ++ L
Sbjct: 426 LNLLKLNLKNLFE-IQDKES-PLLTRLRY-------KQHLSDCVESLDRYLYYCEHDVVL 476
Query: 437 IAEDLRFCHEKLSSIIGKSTTNDLLDNIFSQFCIGK 472
+E+LR +S I +DLLD IF FCIGK
Sbjct: 477 ASEELRSAILSISEITHSVNIDDLLDIIFKDFCIGK 512
>TIGR_CMR|APH_1288 [details] [associations]
symbol:APH_1288 "tRNA modification GTPase TrmE"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0046872 GO:GO:0003924 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0006400 eggNOG:COG0486
HOGENOM:HOG000200714 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
OMA:PGEFSEQ RefSeq:YP_505803.1 ProteinModelPortal:Q2GIJ8
STRING:Q2GIJ8 GeneID:3930863 KEGG:aph:APH_1288 PATRIC:20951370
ProtClustDB:PRK05291 BioCyc:APHA212042:GHPM-1290-MONOMER
Uniprot:Q2GIJ8
Length = 445
Score = 392 (143.0 bits), Expect = 1.6e-45, Sum P(2) = 1.6e-45
Identities = 93/276 (33%), Positives = 141/276 (51%)
Query: 8 IIGIATPPGRGGVGIIRLSGKNLWSIVEIVCKKTKKQLKPRFATYSSFFCKNNNIIDKGL 67
I ++T G+ GV +IR+SG + + ++ K + PR A +ID+ +
Sbjct: 9 IFALSTAQGKSGVAVIRISGPSSMEALRLL--GVKDDISPRVAHCRLLHDSKGRLIDQAV 66
Query: 68 VIYFKAPHSYTGEDVIELHGHGGPIILHMLLSSCLEIGKSIGLRLAMPGEFTKRAFLNNK 127
V+YF P S+TGEDV+EL HG ++ +L E+ I R+A PGEF+ RA+LN K
Sbjct: 67 VLYFPKPGSFTGEDVVELQVHGSRAVIRLLYE---ELQTFI--RIAEPGEFSLRAYLNGK 121
Query: 128 LDLIQVEAIIDLINASTESAAKSAMISLSGKFSXXXXXXXXXXXXXRTLIEFSFDFPEE- 186
+DL + E I DLINA T++ + A+ +GK T +E DFPE+
Sbjct: 122 IDLTRAEGIADLINAETDAQLRQALAQSTGKLEKQYDQWRSILLDILTDLEACIDFPEDV 181
Query: 187 NQELILNKNDFFNEXXXXXXXXXXXXXXXXXRALIRNGLNVVLIGQPNVGKSSLFNSLVG 246
+ +L +N +R+G+ VV++G PN GKS+LFNS+
Sbjct: 182 DSSCVLG--GIYNNIEKLCAVLGQYLNDGHRGERLRSGVRVVILGPPNAGKSTLFNSIAR 239
Query: 247 SDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGI 282
+ AIV+ GTTRD + I I + + + DTAGI
Sbjct: 240 RNAAIVSEHPGTTRDVLEVAIDIGGYPYIVLDTAGI 275
Score = 103 (41.3 bits), Expect = 1.6e-45, Sum P(2) = 1.6e-45
Identities = 30/93 (32%), Positives = 51/93 (54%)
Query: 384 LLDLI-EKTQTI---ESSPYLARERHIHSLNEANYYLSCAIKIINQSEKNFEKNLELIAE 439
LL LI EK++ E ++ +RH +L A+++++ K +E++AE
Sbjct: 362 LLTLIQEKSRDSFPQEGDVFITSQRH-------RSHLQKALQVVDAVSKVMP--IEIVAE 412
Query: 440 DLRFCHEKLSSIIGKSTTNDLLDNIFSQFCIGK 472
LR +L + G + +D+LD+IFS+FCIGK
Sbjct: 413 HLRIAAYELGRVTGAVSGDDILDDIFSKFCIGK 445
>ASPGD|ASPL0000007078 [details] [associations]
symbol:AN6522 species:162425 "Emericella nidulans"
[GO:0070899 "mitochondrial tRNA wobble uridine modification"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] HAMAP:MF_00379
InterPro:IPR004520 InterPro:IPR005225 InterPro:IPR006073
Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0046872
GO:GO:0003924 GO:GO:0005622 EMBL:BN001301 EMBL:AACD01000109
GO:GO:0006400 eggNOG:COG0486 HOGENOM:HOG000200714 KO:K03650
InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396
OrthoDB:EOG4B2X62 RefSeq:XP_664126.1 ProteinModelPortal:Q5AYV8
STRING:Q5AYV8 EnsemblFungi:CADANIAT00007294 GeneID:2870683
KEGG:ani:AN6522.2 OMA:FSEDQHF Uniprot:Q5AYV8
Length = 614
Score = 415 (151.1 bits), Expect = 4.7e-45, Sum P(2) = 4.7e-45
Identities = 103/293 (35%), Positives = 156/293 (53%)
Query: 5 NSPIIGIATPPGRGGVGIIRLSGKNLWSIVEIVCKKTKKQLKPRFATYSSFF-------C 57
+S I ++T PGR + ++R+SG SI + +C K +PR A + + C
Sbjct: 60 DSTIYALSTAPGRAAIAVVRVSGPACVSIYQALCPKAPLP-RPRVAAVRTIYDPASDEPC 118
Query: 58 KNNNIIDKG-LVIYFKAPHSYTGEDVIELHGHGGPIILHMLLSSCLEI-GKSIGLRLAMP 115
+I+D G LV+Y P + TGEDV+E H HGGP I+ +LS+ + GK +R A P
Sbjct: 119 GQADILDAGALVLYMPGPKTATGEDVLEFHLHGGPAIVKSVLSAISKTSGKEHSVRYAEP 178
Query: 116 GEFTKRAFLNNKLDLIQVEAIIDLINASTES----AAKSAMISLSGKFSXXXXXXXXXXX 171
GEFT+RAF+N++L+L Q+EA+ D + A TE A + A +LS ++
Sbjct: 179 GEFTRRAFMNDRLELPQIEALGDTLAADTEQQRRLAVRGASDALSKRYEKWRQQLLYARG 238
Query: 172 XXRTLIEFSFD--FPEENQELILNKNDFFNEXXXXXXXXXXXXXXXXXRALIRNGLNVVL 229
LI+FS D F E + +L+L+ + + L+R+G+ V L
Sbjct: 239 ELEALIDFSEDQYFDESSDDLVLSVS---TQVRALSRQIALHIQNASKGELMRSGIKVAL 295
Query: 230 IGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGI 282
+G PN GKSSL N +VG + AIV++ GTTRD + I + + K+ D AGI
Sbjct: 296 LGAPNAGKSSLLNRIVGREAAIVSTEEGTTRDIVDVGIDLGGWYCKLGDMAGI 348
Score = 79 (32.9 bits), Expect = 4.7e-45, Sum P(2) = 4.7e-45
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 431 EKNLELIAEDLRFCHEKLSSIIGKSTTNDLLDN---IFSQFCIGK 472
E ++ + AE LR+ + L+SI GK + D+ D +F +FC+GK
Sbjct: 570 EVDIVVAAEHLRYAADALASITGKGESGDVEDVLGVVFEKFCVGK 614
>TIGR_CMR|BA_5734 [details] [associations]
symbol:BA_5734 "tRNA modification GTPase TrmE"
species:198094 "Bacillus anthracis str. Ames" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0046872 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003924 GO:GO:0006400
eggNOG:COG0486 KO:K03650 InterPro:IPR018948 InterPro:IPR025867
Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450 ProtClustDB:PRK05291
RefSeq:NP_847879.1 RefSeq:YP_031574.1 RefSeq:YP_052661.1
ProteinModelPortal:Q81JD9 DNASU:1085503
EnsemblBacteria:EBBACT00000010687 EnsemblBacteria:EBBACT00000014942
EnsemblBacteria:EBBACT00000021840 GeneID:1085503 GeneID:2820766
GeneID:2848296 KEGG:ban:BA_5734 KEGG:bar:GBAA_5734 KEGG:bat:BAS5337
HOGENOM:HOG000200713 OMA:IDFPEEV
BioCyc:BANT260799:GJAJ-5414-MONOMER
BioCyc:BANT261594:GJ7F-5590-MONOMER Uniprot:Q81JD9
Length = 458
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 137/473 (28%), Positives = 221/473 (46%)
Query: 8 IIGIATPPGRGGVGIIRLSGKNLWSIVEIVCK-KTKKQLKPRFATYSSFF-CKNNNIIDK 65
I I+T G G + I+R+SG + V + K K ++ Y N +I++
Sbjct: 6 IAAISTALGEGAIAIVRVSGDDAVEKVNRIFKGKDLTEVPSHTIHYGHIVDLDTNQVIEE 65
Query: 66 GLVIYFKAPHSYTGEDVIELHGHGGPIILHMLLSSCLEIGKSIGLRLAMPGEFTKRAFLN 125
+V +AP ++T E+++E++ HGG + ++ +L L + G+RLA PGEFTKRAFLN
Sbjct: 66 VMVSIMRAPRTFTRENIVEINCHGGLVSVNKVLQLIL----AQGVRLAEPGEFTKRAFLN 121
Query: 126 NKLDLIQVEAIIDLINASTESAAKSAMISLSGKFSXXXXXXXXXXXXXRTLIEFSFDFPE 185
++DL Q EA++DLI A T+ A A+ + G+ S +E + D+PE
Sbjct: 122 GRIDLSQAEAVMDLIRAKTDRAMNVAINQMEGRLSKLIGRLRQDILETLAHVEVNIDYPE 181
Query: 186 ENQELILNKNDFFNEXXXXXXXXXXXXXXXXXRALIRNGLNVVLIGQPNVGKSSLFNSLV 245
+ + N + ++R G+ +IG+PNVGKSSL NSLV
Sbjct: 182 YDDVEEMTHNILIEKATHVRAEIAKILETSKQGKILREGIATAIIGRPNVGKSSLLNSLV 241
Query: 246 GSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPDXXXXXXXXXXXXXXXXXXRTW 305
AIVT IAGTTRD I + + + K+ DTAGI + R+
Sbjct: 242 QEKKAIVTDIAGTTRDVIEEYVNVRGVPLKLIDTAGIRETEDVVERIGVE-------RSK 294
Query: 306 VELKNSDIIIYVQDARYDKH-TDFDKKIIKNFPMNIPVIYVWNKIDYS---GHQXXXXXX 361
+ +D+++ V Y + T+ D+++ + ++ V NK D +
Sbjct: 295 EMMSQADLVLVV--VNYSETLTNEDEELFRAVQGKDFIVIV-NKTDLPQAIDMERVIELA 351
Query: 362 XXXXXXXLSASKRIGINLLRNTLLDLIEKTQTIESSP--YLARERHIHSLNEANYYLSCA 419
S + GI+ L + DL + TI+S+ Y++ RHI L +A + A
Sbjct: 352 AGNRVITTSLIEEQGIDELEKAIADLFFEG-TIDSADVTYVSNARHIGLLTQAGKTIGDA 410
Query: 420 IKIINQSEKNFEKNLELIAEDLRFCHEKLSSIIGKSTTNDLLDNIFSQFCIGK 472
I+ I ++++ DL E L I G + L+D +FSQFC+GK
Sbjct: 411 IEAIENGVP-----IDMVQIDLTRTWEILGEITGDTVHESLIDQLFSQFCLGK 458
>POMBASE|SPAC222.05c [details] [associations]
symbol:mss1 "mitochondrial GTPase (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003924 "GTPase
activity" evidence=ISM] [GO:0005525 "GTP binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005743 "mitochondrial
inner membrane" evidence=ISO] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006400 "tRNA modification" evidence=ISO]
[GO:0006412 "translation" evidence=ISO] [GO:0032543 "mitochondrial
translation" evidence=NAS] InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 PomBase:SPAC222.05c GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0005743 GO:GO:0003924 GO:GO:0032543 GO:GO:0006400
eggNOG:COG0486 HOGENOM:HOG000200714 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
OMA:IRISGTH PIR:T50146 RefSeq:NP_593144.1 ProteinModelPortal:Q9UTE7
STRING:Q9UTE7 EnsemblFungi:SPAC222.05c.1 GeneID:2541951
KEGG:spo:SPAC222.05c OrthoDB:EOG4B2X62 NextBio:20803035
Uniprot:Q9UTE7
Length = 496
Score = 414 (150.8 bits), Expect = 4.7e-44, Sum P(2) = 4.7e-44
Identities = 96/276 (34%), Positives = 141/276 (51%)
Query: 8 IIGIATPPGRGGVGIIRLSGKNLWSIVEIVCKKTKKQLKPRFATYSSF-FCKNNNIIDKG 66
I ++TPPG V I+R+SG N + + + K PR A+ + + +IDK
Sbjct: 26 IYALSTPPGTSAVAIVRISGPNACKVAKTLAGSVPK---PRIASLRTIKHPVRSEVIDKA 82
Query: 67 LVIYFKAPHSYTGEDVIELHGHGGPIILHMLLSSCLEIGKSIGLRLAMPGEFTKRAFLNN 126
L++YFK P S+TGEDV+EL HGG ++ + L + + G +R A PGEF++RAF N
Sbjct: 83 LMLYFKKPSSFTGEDVVELQLHGGTAVVDVTLEAIKQSGIP-NIRYAKPGEFSERAFYNG 141
Query: 127 KLDLIQVEAIIDLINASTESAAKSAMISLSGKFSXXXXXXXXXXXXXRTLIEFSFDFPEE 186
+ DL Q+E +ID+INA T SA G R +E S DF EE
Sbjct: 142 RADLTQLEGLIDVINAQTAEQLYSANKEAHGSIYDICFRWRKKLIEYRAFLEASIDFSEE 201
Query: 187 NQELILNKNDFFNEXXXXXXXXXXXXXXXXXRALIRNGLNVVLIGQPNVGKSSLFNSLVG 246
++ + F E + ++R G+NV ++G N GKSSL N L
Sbjct: 202 HELDDIETIKLFEELNEMKDEIDAHIEGGKCKEVLRKGINVAILGPSNAGKSSLINLLAN 261
Query: 247 SDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGI 282
++IV+ +GTTRD I + IN F ++DTAG+
Sbjct: 262 RRISIVSPQSGTTRDAIEVLVDINGFPVLLSDTAGL 297
Score = 67 (28.6 bits), Expect = 4.7e-44, Sum P(2) = 4.7e-44
Identities = 18/70 (25%), Positives = 36/70 (51%)
Query: 403 ERHIHSLNEANYYLSCAIKIINQSEKNFEKNLELIAEDLRFCHEKLSSIIGKSTTNDLLD 462
ER L+ + +LS A+ +K+ ++ + AE+++ E + + G ++
Sbjct: 435 ERQRQCLSSCSSHLSLAL------QKS--SDIVVAAEEVKLATEDIGRVTGAVDMENVFS 486
Query: 463 NIFSQFCIGK 472
IFS+FC+GK
Sbjct: 487 VIFSKFCVGK 496
>SGD|S000004625 [details] [associations]
symbol:MSS1 "Mitochondrial protein" species:4932
"Saccharomyces cerevisiae" [GO:0005525 "GTP binding"
evidence=IEA;ISS] [GO:0005739 "mitochondrion" evidence=IEA;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0006400 "tRNA modification" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0070899
"mitochondrial tRNA wobble uridine modification" evidence=IMP]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001806 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 PRINTS:PR00449
SGD:S000004625 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0005743 GO:GO:0003924 EMBL:BK006946 EMBL:Z49211
eggNOG:COG0486 HOGENOM:HOG000200714 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
OMA:IRISGTH GeneTree:ENSGT00390000016851 OrthoDB:EOG4B2X62
EMBL:X69481 EMBL:DQ834923 PIR:S54025 RefSeq:NP_013736.1
ProteinModelPortal:P32559 SMR:P32559 DIP:DIP-5882N IntAct:P32559
MINT:MINT-2788166 STRING:P32559 PaxDb:P32559 EnsemblFungi:YMR023C
GeneID:855037 KEGG:sce:YMR023C CYGD:YMR023c NextBio:978251
Genevestigator:P32559 GermOnline:YMR023C GO:GO:0070899
Uniprot:P32559
Length = 526
Score = 459 (166.6 bits), Expect = 1.7e-43, P = 1.7e-43
Identities = 130/434 (29%), Positives = 211/434 (48%)
Query: 62 IIDKGLVIYFKAPHSYTGEDVIELHGHGGPIILHMLLSSCLEI-GKSIG--LRLAMPGEF 118
++D L++YF+AP+S+TGEDV+ELH HGG +++ +L + + +S G +R A+PG+F
Sbjct: 105 LLDTSLLLYFQAPYSFTGEDVLELHVHGGKAVVNSILKAIGSLHDRSSGKDIRFALPGDF 164
Query: 119 TKRAFLNNKLDLIQVEAIIDLINASTESAAKSAMISLSGKFSXXXXXXXXXXXXXRTLIE 178
++RAF N K DL Q+E I DLI++ TES +SA+ S +G +
Sbjct: 165 SRRAFQNGKFDLTQLEGIKDLIDSETESQRRSALSSFNGDNKILFENWRETIIENMAQLT 224
Query: 179 FSFDFPEENQELILNKNDFFNEXXXXXXXXXXXXXXXXXRA----LIRNGLNVVLIGQPN 234
DF ++N + I N ++ F+ + +++NG+ +VL+G PN
Sbjct: 225 AIIDFADDNSQEIQNTDEIFHNVEKNIICLRDQIVTFMQKVEKSTILQNGIKLVLLGAPN 284
Query: 235 VGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPDXXXXXXXXXX 294
VGKSSL NSL D++IV+ I GTTRD I I +N + I DTAGI +
Sbjct: 285 VGKSSLVNSLTNDDISIVSDIPGTTRDSIDAMINVNGYKVIICDTAGIREKSSDKIEMLG 344
Query: 295 XXXXXXXXRTWVELKNSDIIIYVQDARYDKHTDFDKKIIKNFPM----NIPVIYVWNKID 350
R + SD+ +++ D D + I+ + N +I V NK D
Sbjct: 345 ID------RAKKKSVQSDLCLFIVDPT-DLSKLLPEDILAHLSSKTFGNKRIIIVVNKSD 397
Query: 351 YSG--------HQXXXXXXXXXXXXXLSASKRIGINLLRNTLLDLIEKTQ--TIESSPYL 400
++ +S + GI L +TL E + ++SP +
Sbjct: 398 LVSDDEMTKVLNKLQTRLGSKYPILSVSCKTKEGIESLISTLTSNFESLSQSSADASPVI 457
Query: 401 ARERHIHSL-NEANYYLSCAIKIINQSEKNFEKNLELIAEDLRFCHEKLSSIIGKST-TN 458
+R L N+ Y L K K+F ++ L E+LR+ + ++ I G++
Sbjct: 458 VSKRVSEILKNDVLYGLEEFFK-----SKDFHNDIVLATENLRYASDGIAKITGQAIGIE 512
Query: 459 DLLDNIFSQFCIGK 472
++LD++FS+FCIGK
Sbjct: 513 EILDSVFSKFCIGK 526
>UNIPROTKB|Q969Y2 [details] [associations]
symbol:GTPBP3 "tRNA modification GTPase GTPBP3,
mitochondrial" species:9606 "Homo sapiens" [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006400 "tRNA modification"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR004520 InterPro:IPR005225 InterPro:IPR006073
Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0005634 GO:GO:0046872 GO:GO:0003924 GO:GO:0006400
EMBL:CH471106 EMBL:AC010463 CTD:84705 eggNOG:COG0486
HOVERGEN:HBG081577 KO:K03650 OrthoDB:EOG4WH8KW InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 EMBL:AF360742
EMBL:AF361481 EMBL:AF360743 EMBL:AF360744 EMBL:AY078987
EMBL:AY078988 EMBL:AK027606 EMBL:AK291929 EMBL:AK297953
EMBL:BC017207 EMBL:BC019261 IPI:IPI00464994 IPI:IPI00644024
IPI:IPI00783945 IPI:IPI00982192 RefSeq:NP_001122327.1
RefSeq:NP_001182351.1 RefSeq:NP_116009.2 RefSeq:NP_598399.2
UniGene:Hs.334885 HSSP:Q9WYA4 ProteinModelPortal:Q969Y2 SMR:Q969Y2
IntAct:Q969Y2 MINT:MINT-2877402 STRING:Q969Y2 PhosphoSite:Q969Y2
DMDM:74731069 PaxDb:Q969Y2 PRIDE:Q969Y2 DNASU:84705
Ensembl:ENST00000324894 Ensembl:ENST00000358792
Ensembl:ENST00000361619 GeneID:84705 KEGG:hsa:84705 UCSC:uc002ngg.4
UCSC:uc002ngh.4 UCSC:uc010eas.3 GeneCards:GC19P017448
H-InvDB:HIX0014890 HGNC:HGNC:14880 HPA:HPA042158 MIM:580000
MIM:608536 neXtProt:NX_Q969Y2 PharmGKB:PA134883205 OMA:PGEFSEQ
GenomeRNAi:84705 NextBio:74792 ArrayExpress:Q969Y2 Bgee:Q969Y2
CleanEx:HS_GTPBP3 Genevestigator:Q969Y2 Uniprot:Q969Y2
Length = 492
Score = 353 (129.3 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 89/277 (32%), Positives = 138/277 (49%)
Query: 8 IIGIATPPGRGGVGIIRLSGKNLWSIVEIVCKKTKKQLKPRFATYSSFFCKNNNIIDKGL 67
I +++ GR G+ +IR SG + I+ L + ++ +D+ L
Sbjct: 36 IFALSSGQGRCGIAVIRTSGPASGHALRILTAPRDLPLARHASLRLLSDPRSGEPLDRAL 95
Query: 68 VIYFKAPHSYTGEDVIELHGHGGPIILHMLLSSCLEIGKSIGLRLAMPGEFTKRAFLNNK 127
V++F P S+TGED +E H HGGP ++ +L + +G GLR A GEFT+RAF N K
Sbjct: 96 VLWFPGPQSFTGEDCVEFHVHGGPAVVSGVLQA---LGSVPGLRPAEAGEFTRRAFANGK 152
Query: 128 LDLIQVEAIIDLINASTESAAKSAMISLSGKFSXXXXXXXXXXXXXRTLIEFSFDFPEEN 187
L+L +VE + DLI+A TE+ + A+ L G+ +E DF E++
Sbjct: 153 LNLTEVEGLADLIHAETEAQRRQALRQLDGELGHLCRGWAETLTKALAHVEAYIDFGEDD 212
Query: 188 --QELILNKNDFFNEXXXXXXXXXXXXXXXXXRALIRNGLNVVLIGQPNVGKSSLFNSLV 245
+E +L + D E +R+G++VV+ G PN GKSSL N L
Sbjct: 213 NLEEGVLEQADI--EVRALQVALGAHLRDARRGQRLRSGVHVVVTGPPNAGKSSLVNLLS 270
Query: 246 GSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGI 282
V+IV+ GTTRD + + + F ++DTAG+
Sbjct: 271 RKPVSIVSPEPGTTRDVLETPVDLAGFPVLLSDTAGL 307
Score = 94 (38.1 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 26/75 (34%), Positives = 37/75 (49%)
Query: 398 PYLARERHIHSLNEANYYLSCAIKIINQSEKNFEKNLELIAEDLRFCHEKLSSIIGKSTT 457
P L R RH H L C + + +++ K+L L AE LR L+ + G T
Sbjct: 427 PLLTRARHQHHLQ------GC-LDALGHYKQS--KDLALAAEALRVARGHLTRLTGGGGT 477
Query: 458 NDLLDNIFSQFCIGK 472
++LD IF FC+GK
Sbjct: 478 EEILDIIFQDFCVGK 492
>TIGR_CMR|SPO_3895 [details] [associations]
symbol:SPO_3895 "tRNA modification GTPase TrmE"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] HAMAP:MF_00379 InterPro:IPR003593 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 PRINTS:PR00326
SMART:SM00382 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0046872 GO:GO:0003924
GO:GO:0006400 HSSP:Q9X1F8 eggNOG:COG0486 HOGENOM:HOG000200714
KO:K03650 InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631
Pfam:PF10396 OMA:PGEFSEQ ProtClustDB:PRK05291 RefSeq:YP_169083.1
ProteinModelPortal:Q5LLM7 GeneID:3196284 KEGG:sil:SPO3895
PATRIC:23381297 Uniprot:Q5LLM7
Length = 428
Score = 348 (127.6 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 95/276 (34%), Positives = 126/276 (45%)
Query: 8 IIGIATPPGRGGVGIIRLSGKNLWSIVEIVCKKTKKQLKPRFATYSSFFCKNNNIIDKGL 67
I +AT G+ GV +IRLSG + C L R + +D G+
Sbjct: 4 IFALATAQGKAGVAVIRLSGPRAY---HTACLLAGPDLPSRGLSVRQLKDSQGARLDDGV 60
Query: 68 VIYFKAPHSYTGEDVIELHGHGGPIILHMLLSSCLEIGKSIGLRLAMPGEFTKRAFLNNK 127
V+ F AP S+TGEDV E HG +L CL G GLRLA PGEFT+RA N K
Sbjct: 61 VLTFAAPASFTGEDVAEFQIHGSLATTEAVLR-CL--GDLDGLRLAEPGEFTRRALENGK 117
Query: 128 LDLIQVEAIIDLINASTESAAKSAMISLSGKFSXXXXXXXXXXXXXRTLIEFSFDFPEEN 187
+ L QVE + DLI+A TE+ K A L+G L+E DF +E
Sbjct: 118 MSLPQVEGLADLIDAETEAQRKQAQAVLNGALGQLAEGWRAKLIRAAALLEAVIDFADE- 176
Query: 188 QELILNKNDFFNEXXXXXXXXXXXXXXXXXRA-LIRNGLNVVLIGQPNVGKSSLFNSLVG 246
E+ + + A IR G V +IG PN GKS+L N L G
Sbjct: 177 -EVPTDVSPEVRALLAEVRADLEHEIAGVRIAERIRTGFEVAIIGPPNAGKSTLLNMLAG 235
Query: 247 SDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGI 282
+ A+ + +AGTTRD I + + + DTAG+
Sbjct: 236 REAALTSEVAGTTRDVIEVRMDLGGLPVTLLDTAGL 271
Score = 97 (39.2 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 28/97 (28%), Positives = 49/97 (50%)
Query: 376 GINLLRNTLLDLIEKTQTIESSPYLARERHIHSLNEANYYLSCAIKIINQSEKNFEKNLE 435
G++ L + D++ KT++ S+ RERH ++ A L ++ ++
Sbjct: 338 GVDQLVQRISDVL-KTRS-SSAGIATRERHRVAMKTALDALDRTGTVLESGPDLYD---- 391
Query: 436 LIAEDLRFCHEKLSSIIGKSTTNDLLDNIFSQFCIGK 472
+ AE+LR L S++G+ LLD IF+ FC+GK
Sbjct: 392 IAAEELRTAIRALESLVGRIGVETLLDEIFASFCLGK 428
>RGD|1305367 [details] [associations]
symbol:Gtpbp3 "GTP binding protein 3" species:10116 "Rattus
norvegicus" [GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006400 "tRNA modification" evidence=IEA]
InterPro:IPR004520 InterPro:IPR005225 InterPro:IPR006073
Pfam:PF01926 RGD:1305367 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0003924 GO:GO:0006400 CTD:84705 eggNOG:COG0486
HOGENOM:HOG000200714 HOVERGEN:HBG081577 KO:K03650 OrthoDB:EOG4WH8KW
InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396
TIGRFAMs:TIGR00450 HSSP:Q9WYA4 GeneTree:ENSGT00390000016851
EMBL:BC087083 IPI:IPI00358231 RefSeq:NP_001011919.1
UniGene:Rn.109111 ProteinModelPortal:Q5PQQ1 STRING:Q5PQQ1
PhosphoSite:Q5PQQ1 PRIDE:Q5PQQ1 Ensembl:ENSRNOT00000060355
GeneID:290633 KEGG:rno:290633 UCSC:RGD:1305367 NextBio:631337
Genevestigator:Q5PQQ1 Uniprot:Q5PQQ1
Length = 492
Score = 346 (126.9 bits), Expect = 1.5e-39, Sum P(2) = 1.5e-39
Identities = 90/284 (31%), Positives = 139/284 (48%)
Query: 2 LTKNSPIIGIATPPGRGGVGIIRLSGK-NLWSIVEIVCKKTKKQLKPRFATYSSFFCKNN 60
L S I +++ GR + +IR SG + ++ + + + C
Sbjct: 30 LVPGSTIFALSSGQGRCAIAVIRTSGPASGLALRSLTALREPPPARSACLRLLRHPCSGE 89
Query: 61 NIIDKGLVIYFKAPHSYTGEDVIELHGHGGPIILHMLLSSCLEIGKSIGLRLAMPGEFTK 120
+ D+ LV++F P S+TGED +ELH HGGP ++ +L + +G GLR A GEFT+
Sbjct: 90 PL-DRSLVLWFPGPQSFTGEDCMELHVHGGPAVVSGVLQA---LGSVPGLRPAKAGEFTR 145
Query: 121 RAFLNNKLDLIQVEAIIDLINASTESAAKSAMISLSGKFSXXXXXXXXXXXXXRTLIEFS 180
RAF + KL L +VE + DLI+A TE+ + A+ L G+ S +E
Sbjct: 146 RAFAHGKLSLTEVEGLADLIHAETEAQRRQALRQLDGELSQLCQGWAKTLTKALAHVEAY 205
Query: 181 FDFPEEN--QELILNKNDFFNEXXXXXXXXXXXXXXXXXRALIRNGLNVVLIGQPNVGKS 238
DF E++ +E +L + D + +R+G NVV+ G PN GKS
Sbjct: 206 IDFGEDDNLEEGVLEQVD--RDVRALEVALSSHLRDARRGQRLRSGANVVVAGPPNAGKS 263
Query: 239 SLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGI 282
SL N L V+IV+ GTTRD + + + F ++DTAG+
Sbjct: 264 SLVNLLSQKPVSIVSPEPGTTRDILETPVDLAGFPVLLSDTAGL 307
Score = 92 (37.4 bits), Expect = 1.5e-39, Sum P(2) = 1.5e-39
Identities = 25/75 (33%), Positives = 36/75 (48%)
Query: 398 PYLARERHIHSLNEANYYLSCAIKIINQSEKNFEKNLELIAEDLRFCHEKLSSIIGKSTT 457
P L R RH Y+L + + + + +L L AE LR +LS + G T
Sbjct: 427 PLLTRARH-------QYHLQGCLDALGRFQ--LTTDLALAAEALRQARRQLSHLTGGGGT 477
Query: 458 NDLLDNIFSQFCIGK 472
++LD IF FC+GK
Sbjct: 478 EEILDLIFQDFCVGK 492
>UNIPROTKB|P75104 [details] [associations]
symbol:mnmE "tRNA modification GTPase MnmE" species:272634
"Mycoplasma pneumoniae M129" [GO:0005515 "protein binding"
evidence=IPI] HAMAP:MF_00379 InterPro:IPR001806 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 PRINTS:PR00449
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0007264
GO:GO:0046872 GO:GO:0003924 GO:GO:0006400 EMBL:U00089
GenomeReviews:U00089_GR eggNOG:COG0486 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
ProtClustDB:PRK05291 OMA:IDFPEEV PIR:S73472 RefSeq:NP_109696.1
ProteinModelPortal:P75104 IntAct:P75104 GeneID:877349
KEGG:mpn:MPN008 PATRIC:20021289 BioCyc:MPNE272634:GJ6Z-8-MONOMER
Uniprot:P75104
Length = 442
Score = 333 (122.3 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 103/355 (29%), Positives = 165/355 (46%)
Query: 1 MLTKNSPIIGIATPPGRGGVGIIRLSGKNLWSIVEIVCKKTKKQLKPRFATYSSFFCKNN 60
M TK + + +AT P + IIRLSG +++ I+ + K K L R N
Sbjct: 1 MDTKQT-MFALATAPFNSAIHIIRLSGPDVYRIINQITNKEVKPLGMRIQRVW-LIDHNQ 58
Query: 61 NIIDKGLVIYFKAPHSYTGEDVIELHGHGGPIILHMLLSSCLEIGKSIGLRLAMPGEFTK 120
+D L+ F AP+SYTGED+IE+ HG +I++ ++ L+ G A PGEFT+
Sbjct: 59 KKVDDVLLFKFVAPNSYTGEDLIEISCHGSMVIVNEIIGLLLKHGAV----QAQPGEFTQ 114
Query: 121 RAFLNNKLDLIQVEAIIDLINASTESAAKSAMISLSGKFSXXXXXXXXXXXXXRTLIEFS 180
R +LN K+ L Q ++ +L+ + + A+ +L+G+ +E +
Sbjct: 115 RGYLNGKMSLNQAASVNNLVLSPNTTLKDVALNALAGQVDARLEPLVEKLGQLVMQMEVN 174
Query: 181 FDFPE---ENQELILNKNDFFNEXXXXXXXXXXXXXXXXXRAL-IRNGLNVVLIGQPNVG 236
D+PE E +EL+ N+ + +++ + +IG NVG
Sbjct: 175 LDYPEYTDEQRELVT-----MNQAVVQITQILNQIVVGQDQLQRLKDPFKIAIIGNTNVG 229
Query: 237 KSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPDXXXXXXXXXXXX 296
KSSL N+L+ D AIV++I G+TRD + +N KI DTAGI
Sbjct: 230 KSSLLNALLDQDKAIVSAIKGSTRDIVEGDFALNGHFVKILDTAGIRQHQSALEKAGIQ- 288
Query: 297 XXXXXXRTWVELKNSDIIIYVQDARYDKHTDFDKKIIKNFP-MNIPVIYVWNKID 350
+T+ +K ++++IY+ DAR + D KII + V NK D
Sbjct: 289 ------KTFGAIKTANLVIYLLDARQPEP---DPKIIARLKKLKKDFFLVHNKAD 334
Score = 104 (41.7 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 44/172 (25%), Positives = 76/172 (44%)
Query: 303 RTWVELKNSDIIIYVQDARYDKHTDFDKKIIKNFP-MNIPVIYVWNKIDYSGHQXXXXXX 361
+T+ +K ++++IY+ DAR + D KII + V NK D
Sbjct: 289 KTFGAIKTANLVIYLLDARQPEP---DPKIIARLKKLKKDFFLVHNKADL---------V 336
Query: 362 XXXXXXXLSASKRIGINLLRNTLLDLIEKTQTIESSP-YLARERHIHSLNEANYYLSCAI 420
+SA ++ I L + L + + ++E + YL + L +A L +
Sbjct: 337 QQSFQVSISAKQK-QIQPLVDLLTQYLHQFYSVEQNQLYLISDWQTILLQKAIAELEHFL 395
Query: 421 KIINQSEKNFEKNLELIAEDLRFCHEKLSSIIGKSTTNDLLDNIFSQFCIGK 472
I Q F +++ LR HE + ++GK+T DL++ IF FC+GK
Sbjct: 396 --IKQQNCLF---FDILVVHLRAAHEYILQVLGKNTNYDLINEIFKHFCLGK 442
>FB|FBgn0039189 [details] [associations]
symbol:CG18528 species:7227 "Drosophila melanogaster"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0006184 "GTP catabolic
process" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006400 "tRNA modification" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] HAMAP:MF_00379 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:AE014297 GO:GO:0046872 GO:GO:0003924
GO:GO:0005622 GO:GO:0006400 HSSP:Q9X1F8 eggNOG:COG0486 KO:K03650
InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396
TIGRFAMs:TIGR00450 GeneTree:ENSGT00390000016851 EMBL:AY071544
EMBL:AY071692 RefSeq:NP_651251.3 UniGene:Dm.5798 SMR:Q9VC87
IntAct:Q9VC87 MINT:MINT-821147 STRING:Q9VC87
EnsemblMetazoa:FBtr0084628 GeneID:42906 KEGG:dme:Dmel_CG18528
UCSC:CG18528-RA FlyBase:FBgn0039189 InParanoid:Q9VC87 OMA:LTQTRHR
OrthoDB:EOG4HQC0H GenomeRNAi:42906 NextBio:831200 Uniprot:Q9VC87
Length = 493
Score = 367 (134.2 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 97/268 (36%), Positives = 134/268 (50%)
Query: 19 GVGIIRLSGKNLWSIVEIVCKKTKKQLKPRFATYSSFFCK-NNNIIDKGLVIYFKAPHSY 77
GV +IR+SG + + + + K R A SF+ + +ID+GL+++F P S+
Sbjct: 36 GVSVIRVSGPQTKKALRAIVANKEYEPKARQAYLKSFYHPASKEMIDRGLLLWFPGPASF 95
Query: 78 TGEDVIELHGHGGPIILHMLLSSCLEIGKSIGLRLAMPGEFTKRAFLNNKLDLIQVEAII 137
TGED E HG ++ +L + +GK GLR A PGEFTKRAF KLDL +VE +
Sbjct: 96 TGEDSCEFQVHGSLAVIAAMLDA---LGKVDGLRPAEPGEFTKRAFFGGKLDLTEVEGLA 152
Query: 138 DLINASTESAAKSAMISLSGKFSXXXXXXXXXXXXXRTLIEFSFDFPEENQ-E--LILNK 194
DLI+A TE+ K A++ +G + +E DF EE Q E +IL
Sbjct: 153 DLIHAETEAQRKQALLQSTGALARLYDNWRRRLIRCAAHLEAYIDFAEEEQIEGGIILQL 212
Query: 195 NDFFNEXXXXXXXXXXXXXXXXXRALIRNGLNVVLIGQPNVGKSSLFNSLVGSDVAIVTS 254
E L+R+G+ V+IG PNVGKSSL N L V+IVT
Sbjct: 213 G---KELKAVKREIREHLSDQRQGELLRDGVRTVIIGAPNVGKSSLLNLLCQRSVSIVTD 269
Query: 255 IAGTTRDKITKTIQINKFLFKITDTAGI 282
AGTTRD I + +DTAG+
Sbjct: 270 QAGTTRDIIETMHNFGGYPVVFSDTAGL 297
Score = 66 (28.3 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 433 NLELIAEDLRFCHEKLSSIIGKSTTNDLLDNIFSQFCIGK 472
++ + A LR + I G + D+LD +F FCIGK
Sbjct: 454 DMAIAASKLRNSVRCIERITGHISCEDILDVVFKDFCIGK 493
>ZFIN|ZDB-GENE-050522-335 [details] [associations]
symbol:gtpbp3 "GTP binding protein 3" species:7955
"Danio rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0006400 "tRNA modification" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008033 "tRNA processing" evidence=IEA]
InterPro:IPR004520 InterPro:IPR005225 InterPro:IPR006073
Pfam:PF01926 ZFIN:ZDB-GENE-050522-335 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0003924 GO:GO:0006400
EMBL:BC095801 IPI:IPI00500987 RefSeq:NP_001018605.1
UniGene:Dr.41738 HSSP:P25522 ProteinModelPortal:Q501Z5 SMR:Q501Z5
STRING:Q501Z5 GeneID:553807 KEGG:dre:553807 CTD:84705
eggNOG:COG0486 HOGENOM:HOG000200714 HOVERGEN:HBG081577
InParanoid:Q501Z5 KO:K03650 OrthoDB:EOG4WH8KW NextBio:20880525
InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396
TIGRFAMs:TIGR00450 Uniprot:Q501Z5
Length = 500
Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
Identities = 139/481 (28%), Positives = 213/481 (44%)
Query: 8 IIGIATPPGRGGVGIIRLSGKNLWSIVEIVCKKTKKQLKPRFATYSSF-FCKNNNIIDKG 66
I +++ G+ GV ++R+SG + V + T+ PR A+ S ++ ++D+G
Sbjct: 37 IYSLSSGQGKCGVAVVRVSGP---ASALAVRRLTRSLPAPRTASLRSISHPQSKELLDRG 93
Query: 67 LVIYFKAPHSYTGEDVIELHGHGGPIILHMLLSSCLEIGKSIGLRLAMPGEFTKRAFLNN 126
LV++F P S+TGED E H HGGP ++ +L + +G GLR A GEFT+RAF
Sbjct: 94 LVLWFPGPASFTGEDSAEFHIHGGPAVISGVLQA---LGSLPGLRPAEAGEFTRRAFYAG 150
Query: 127 KLDLIQVEAIIDLINASTESAAKSAMISLSGKFSXXXXXXXXXXXXXRTLIEFSFDFPEE 186
KLDL +VE + DLI+A TE+ + A+ ++G +E DF E+
Sbjct: 151 KLDLTEVEGLSDLIHAETEAQRRQALRQMAGDLGRIYQDWTDQLKRCLAHVEAFIDFSED 210
Query: 187 N--QELILNKNDFFNEXXXXXXXXXXXXXXXXXRALIRNGLNVVLIGQPNVGKSSLFNSL 244
++ +LN D + R +R+G++VV+ G N GKSSL N L
Sbjct: 211 ELIEDGVLNDVDRAVQQLQTDMENHLSDERRGER--LRSGVHVVIAGSTNAGKSSLLNLL 268
Query: 245 VGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPDXXXXXXXXXXXXXXXXXXRT 304
AIV+ AGTTRD + + I + ++DTAG+ D +
Sbjct: 269 TQRPAAIVSPTAGTTRDVLEVPLDIGGYPVLLSDTAGLRDTSDSVEQEGVRRARQRVEQA 328
Query: 305 WVELKNSDIIIYVQDARYDKH--TDFDKKIIKNFPMNIPVIYVWNKIDY-SGHQXXXXXX 361
+ L D+ + R+ K I++ I + N+ D S Q
Sbjct: 329 DLSLVVVDLTQLPSERRHVPVFLRGHLKNILERSSQQQQHILILNESDLVSAEQQRSIQT 388
Query: 362 XXXXXXX------LSASKRIGIN----LLRNTLLDLIEKTQTIESSPYLARERHIHSLNE 411
LS R G+ LL NTL L + SP L + RH
Sbjct: 389 SLQELSGAPSACFLSCHSRDGLEELLTLLHNTLKTLCG--DPLIGSPTLTQTRH------ 440
Query: 412 ANYYLSCAIKIINQSEKNFEKNLELIAEDLRFCHEKLSSIIGKSTTNDLLDNIFSQFCIG 471
+L +I+ + Q + + +L L AE LR L I G+ + ++LD IF FCIG
Sbjct: 441 -RTHLQKSIEALQQYHEYRDVDLALAAEGLRLGLLSLGRITGRVSPEEILDVIFRDFCIG 499
Query: 472 K 472
K
Sbjct: 500 K 500
>MGI|MGI:1917609 [details] [associations]
symbol:Gtpbp3 "GTP binding protein 3" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006184 "GTP
catabolic process" evidence=IEA] [GO:0006400 "tRNA modification"
evidence=IEA] [GO:0008033 "tRNA processing" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 MGI:MGI:1917609 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0003924 GO:GO:0006400
CTD:84705 eggNOG:COG0486 HOGENOM:HOG000200714 HOVERGEN:HBG081577
KO:K03650 OrthoDB:EOG4WH8KW InterPro:IPR018948 InterPro:IPR025867
Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450 HSSP:Q9WYA4
EMBL:AF361482 EMBL:AY029613 EMBL:BC092042 IPI:IPI00338388
IPI:IPI00556865 RefSeq:NP_115933.2 RefSeq:XP_003689533.1
UniGene:Mm.142112 ProteinModelPortal:Q923K4 SMR:Q923K4
STRING:Q923K4 PhosphoSite:Q923K4 PaxDb:Q923K4 PRIDE:Q923K4
Ensembl:ENSMUST00000007754 Ensembl:ENSMUST00000095259
Ensembl:ENSMUST00000150969 GeneID:100862531 GeneID:70359
KEGG:mmu:100862531 KEGG:mmu:70359 GeneTree:ENSGT00390000016851
InParanoid:Q923K4 NextBio:331446 Bgee:Q923K4 CleanEx:MM_GTPBP3
Genevestigator:Q923K4 Uniprot:Q923K4
Length = 492
Score = 340 (124.7 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 92/287 (32%), Positives = 139/287 (48%)
Query: 2 LTKNSPIIGIATPPGRGGVGIIRLSGKN----LWSIVEIVCKKTKKQLKPRFATYSSFFC 57
L +S I +++ GR + +IR SG L S+ + ++ R + C
Sbjct: 30 LVPSSTIFALSSGQGRCAIAVIRTSGPASGLALRSLTALQEPPPARRACLRLLRHP---C 86
Query: 58 KNNNIIDKGLVIYFKAPHSYTGEDVIELHGHGGPIILHMLLSSCLEIGKSIGLRLAMPGE 117
+ D+ LV++F P S+TGED +E H HGGP ++ +L + +G GLR A GE
Sbjct: 87 SGEPL-DRSLVLWFPGPQSFTGEDCVEFHVHGGPAVVSGVLQA---LGSVPGLRPAEAGE 142
Query: 118 FTKRAFLNNKLDLIQVEAIIDLINASTESAAKSAMISLSGKFSXXXXXXXXXXXXXRTLI 177
FT+RAF + KL L +VE + DLI A TE+ + A+ L G+ S +
Sbjct: 143 FTRRAFAHGKLSLTEVEGLADLIRAETEAQRRQALRQLDGELSQLCQGWAKTLTKALAYV 202
Query: 178 EFSFDFPEEN--QELILNKNDFFNEXXXXXXXXXXXXXXXXXRALIRNGLNVVLIGQPNV 235
E DF E++ +E +L + D E + +G NVV+ G PN
Sbjct: 203 EAYIDFGEDDNLEEGVLEQAD--REVRALEVALGSHLRDARRGQRLLSGANVVVTGPPNA 260
Query: 236 GKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGI 282
GKSSL N L V+IV+ GTTRD + + + F ++DTAG+
Sbjct: 261 GKSSLVNLLSQKPVSIVSPEPGTTRDVLETPVDLAGFPVLLSDTAGL 307
Score = 87 (35.7 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 24/75 (32%), Positives = 35/75 (46%)
Query: 398 PYLARERHIHSLNEANYYLSCAIKIINQSEKNFEKNLELIAEDLRFCHEKLSSIIGKSTT 457
P L R RH Y+L + + + +L L AE LR +L+ + G T
Sbjct: 427 PLLTRVRH-------QYHLQGCLDALGHYQ--LATDLALAAEALRQARRQLNHLTGGGGT 477
Query: 458 NDLLDNIFSQFCIGK 472
++LD IF FC+GK
Sbjct: 478 EEILDLIFQDFCVGK 492
>UNIPROTKB|E1BH64 [details] [associations]
symbol:E1BH64 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0006400 "tRNA modification"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
HAMAP:MF_00379 InterPro:IPR004520 InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0046872 GO:GO:0003924 GO:GO:0006400
InterPro:IPR018948 InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396
OMA:PGEFSEQ GeneTree:ENSGT00390000016851 EMBL:DAAA02019078
IPI:IPI00710937 ProteinModelPortal:E1BH64
Ensembl:ENSBTAT00000005506 Uniprot:E1BH64
Length = 493
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 137/478 (28%), Positives = 209/478 (43%)
Query: 8 IIGIATPPGRGGVGIIRLSGKNLWSIVEIVCKKTKKQLKPRFATYSSFFCKNNNIIDKGL 67
I +++ GR G+ +IR SG ++ + L + ++ +D+ L
Sbjct: 38 IFALSSGQGRCGIAVIRTSGPASGHALQSLTAPRDLPLARKACLRLLSDPRSGEPLDRAL 97
Query: 68 VIYFKAPHSYTGEDVIELHGHGGPIILHMLLSSCLEIGKSIGLRLAMPGEFTKRAFLNNK 127
V++F P S+TGED E H HGGP ++ +L + +G GLR A GEFT+RAF + K
Sbjct: 98 VLWFPGPQSFTGEDCAEFHVHGGPAVVSGVLQA---LGSVPGLRPAEAGEFTRRAFAHGK 154
Query: 128 LDLIQVEAIIDLINASTESAAKSAMISLSGKFSXXXXXXXXXXXXXRTLIEFSFDFPEEN 187
L L +VE + DLI+A TE+ + A+ L G+ +E DF E++
Sbjct: 155 LSLTEVEGLADLIHAETEAQRRQALRQLDGELGDLCRGWAETLTKALAHVEAYIDFSEDD 214
Query: 188 --QELILNKNDFFNEXXXXXXXXXXXXXXXXXRALIRNGLNVVLIGQPNVGKSSLFNSLV 245
+E +L++ D +E +R+G +VV+ G PN GKSSL N L
Sbjct: 215 NLEEGVLDQAD--SEVRKLEVALGVHLRDARRGQRLRSGAHVVVAGPPNAGKSSLVNLLS 272
Query: 246 GSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPDXXXXXXXXXXXXXXXXXXRTW 305
V+IV+ GTTRD + + + F ++DTAG+ + R
Sbjct: 273 RKPVSIVSPEPGTTRDVLETPVDLAGFPALLSDTAGLREGVGPVEQEGVR-------RAQ 325
Query: 306 VELKNSDIIIYVQDAR---YDKHTDF-DKKIIKNFPMNIP------VIYVWNKIDYSGHQ 355
L+ +D+I+ V DA +F D +I N P ++ V NK D
Sbjct: 326 KRLEQADLILAVLDASDLASPASCNFLDTVVIPAGARN-PNGSRQRLLLVLNKSDLLPAG 384
Query: 356 XXXXXXXXXXXXXLSASKRIGIN-LLRNTLLDLIEKTQTIESSPYLARERHIHSLNEANY 414
LS G++ LL +L + P L R RH H L
Sbjct: 385 RSDLHPDLPSHLLLSCLTGEGLDGLLEALKKELAALCGDPSTGPLLTRSRHQHHLR---- 440
Query: 415 YLSCAIKIINQSEKNFEKNLELIAEDLRFCHEKLSSIIGKSTTNDLLDNIFSQFCIGK 472
C + + Q ++ K+L L AE LR LS + G T ++LD IF FC+GK
Sbjct: 441 --GC-LDALGQYKQ--AKDLALAAEALRVARGHLSHLTGGGGTEEILDIIFRDFCVGK 493
>CGD|CAL0004408 [details] [associations]
symbol:orf19.2042 species:5476 "Candida albicans" [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:1900524 "positive
regulation of flocculation via cell wall protein-carbohydrate
interaction by positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0070899 "mitochondrial
tRNA wobble uridine modification" evidence=IEA] HAMAP:MF_00379
InterPro:IPR004520 InterPro:IPR005225 InterPro:IPR006073
Pfam:PF01926 CGD:CAL0004408 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0003924 GO:GO:0005622 GO:GO:0006400 EMBL:AACQ01000031
EMBL:AACQ01000030 eggNOG:COG0486 KO:K03650 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
RefSeq:XP_719491.1 RefSeq:XP_719616.1 ProteinModelPortal:Q5AD25
STRING:Q5AD25 GeneID:3638773 GeneID:3638809 KEGG:cal:CaO19.2042
KEGG:cal:CaO19.9590 Uniprot:Q5AD25
Length = 529
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 134/492 (27%), Positives = 222/492 (45%)
Query: 8 IIGIATPPGRGGVGIIRLSGKNLWSIVEIVCKKTKKQLKPRFATYSSFFC------KNNN 61
+ ++T G+ + ++R+SG I + TK K R A+ + K +
Sbjct: 53 VFALSTKFGKSAIAVVRISGPQSKYIYHKLTNSTKPP-KNRIASVRKLYSPEPHSNKKSV 111
Query: 62 IIDKGLVIYFKAPHSYTGEDVIELHGHGGPIILHMLLSSCLEI---GKSIGLRLAMPGEF 118
+D+ L ++ P +YTGED++ELH HGG I+ +L S ++ + +R A GEF
Sbjct: 112 FLDEALTLFLPGPKTYTGEDLLELHLHGGVAIIKSVLQSIKKLHDPNNGVIIRQADRGEF 171
Query: 119 TKRAFLNNKLDLIQVEAIIDLINASTESAAKSAMISLSGK----FSXXXXXXXXXXXXXR 174
+K+AF N +LDL ++E I D+INA TES +++ S SG+ F
Sbjct: 172 SKQAFYNGRLDLTELEGINDMINAETESQRLASLASSSGQTKIEFMKWRNEIINQMANLT 231
Query: 175 TLIEFSFDFP-EENQELILNKNDFFNEXXXXXXXXXXXXXXXXXRALIRNGLNVVLIGQP 233
+I+F D EE +I + + N + L+ NG+ + L+G P
Sbjct: 232 MIIDFGEDHDIEETDRMIRDVKE--NIAKIESEIKAYLSKVKSSQILL-NGIQLALLGPP 288
Query: 234 NVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPDXXXXXXXXX 293
N GKSS+ N L D AIV+ IAGTTRD + ++I + + DTAGI
Sbjct: 289 NAGKSSILNILANKDAAIVSEIAGTTRDILDIPLEIGGYKVVVGDTAGIRSFEEADSIEQ 348
Query: 294 XXXXXXXXXRTWVELKNSDIIIYVQDARYDKHTDFD-KKIIKNF-PMNIPVIYVWNKIDY 351
R+ + +D +I V D + + K+ +K N ++ V NK D
Sbjct: 349 EGIKRAKQ-RSML----ADFVIVVLDPMSVEKEPLELKEHLKTLVKANKQMLIVLNKQDL 403
Query: 352 SGHQXXXXXXXXXXXXXL--------SASKRIGINLLRNTLLDLIEK-TQTIESSPYLAR 402
+ L S S GI+ L+ L++ + +Q+ S+P +
Sbjct: 404 FASRSEEMISNYSRLLDLPKNYFHVVSCSTGSGIDNLQKLLIEKFKDLSQSETSNPIIVS 463
Query: 403 ERHIHSLNEANYYLSCAIKIINQSEKNFEKNLELIAED-LRFCHEKLSSIIGKSTT-NDL 460
R + + E N L + + ++ +++ L+A D LR + + I G+S ++
Sbjct: 464 SR-VQDILE-NDILFGFKEFYHWADA---EDV-LVATDCLRQSVDGIGKITGQSIDLEEI 517
Query: 461 LDNIFSQFCIGK 472
LD +FS FCIGK
Sbjct: 518 LDVVFSSFCIGK 529
>WB|WBGene00009557 [details] [associations]
symbol:F39B2.7 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0006400 "tRNA
modification" evidence=IEA] [GO:0015093 "ferrous iron transmembrane
transporter activity" evidence=IEA] [GO:0015684 "ferrous iron
transport" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] HAMAP:MF_00379 InterPro:IPR004520
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0003924 GO:GO:0005622 GO:GO:0006400
HSSP:P25522 eggNOG:COG0486 HOGENOM:HOG000200714 InterPro:IPR018948
InterPro:IPR025867 Pfam:PF12631 Pfam:PF10396 TIGRFAMs:TIGR00450
OMA:PGEFSEQ GeneTree:ENSGT00390000016851 EMBL:Z92834 PIR:T21994
RefSeq:NP_493573.1 ProteinModelPortal:Q9XTZ1 SMR:Q9XTZ1
IntAct:Q9XTZ1 STRING:Q9XTZ1 PaxDb:Q9XTZ1 EnsemblMetazoa:F39B2.7.1
EnsemblMetazoa:F39B2.7.2 GeneID:3564835 KEGG:cel:CELE_F39B2.7
UCSC:F39B2.7 CTD:3564835 WormBase:F39B2.7 InParanoid:Q9XTZ1
NextBio:954161 Uniprot:Q9XTZ1
Length = 439
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 102/353 (28%), Positives = 157/353 (44%)
Query: 6 SPIIGIATPPGRGGVGIIRLSGKNLWSIVEIVCKKTKKQLKPRFATYSSFFCKNNNIIDK 65
S I +++ + + R+SG ++ + ++ K KP+ Y+ + + IID+
Sbjct: 2 STIFALSSGTLPSAIAMFRVSGSQSLPVLRQLSRR--KVWKPKTMKYTKLYDSESKIIDE 59
Query: 66 GLVIYFKAPHSYTGEDVIELHGHGGPIILHMLLSSCLEIGKSIGLRLAMPGEFTKRAFLN 125
+ +Y P ++TGED E HG + + +SCL +++ R A GEFT+RAF N
Sbjct: 60 AMAVYLPGPKTFTGEDTAEFFLHGSQAVA-VKFASCLAGIQNV--REAKRGEFTRRAFHN 116
Query: 126 NKLDLIQVEAIIDLINASTESAAKSAMISLSGKFSXXXXXXXXXXXXXRTLIEFSFDFPE 185
KL + +V I LI + TE +A + G + + DF E
Sbjct: 117 GKLSISEVRGIDRLIKSRTEKERNAAFGQMRGGVRAIEIRKQLIQILSKLFV--IIDFGE 174
Query: 186 E-NQELILNKNDFFNEXXXXXXXXXXXXXXXXXRALIRNGLNVVLIGQPNVGKSSLFNSL 244
N EL + D RA + GL++VL G+PN GKSS+ N L
Sbjct: 175 HVNLELREAQQDV--SEILHELNRMIKAWDGAERA--QRGLDIVLYGRPNSGKSSILNQL 230
Query: 245 VGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPDXXXXXXXXXXXXXXXXXXRT 304
DVAIV+SI GTTRD + IQIN ++TDTAG+ R
Sbjct: 231 AHDDVAIVSSIPGTTRDSLETIIQINGVRCRLTDTAGVRQKTNDVIEAEGIR------RA 284
Query: 305 WVELKNSDIIIYVQDARYDKHTDF-----DKKIIKNFPMNIPVIYVWNKIDYS 352
++++DII V D ++ D D ++++N VI NK D S
Sbjct: 285 QKRIQSADIICVVVDPQFTSDDDVESILNDVEVMRN--REARVIIAKNKSDLS 335
>UNIPROTKB|E2RE04 [details] [associations]
symbol:GTPBP3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525
TIGRFAMs:TIGR00231 InterPro:IPR025867 Pfam:PF12631 OMA:IRISGTH
GeneTree:ENSGT00390000016851 EMBL:AAEX03012297
Ensembl:ENSCAFT00000024419 Uniprot:E2RE04
Length = 399
Score = 235 (87.8 bits), Expect = 4.1e-24, Sum P(2) = 4.1e-24
Identities = 62/196 (31%), Positives = 95/196 (48%)
Query: 89 GGPIILHMLLSSCLEIGKSIGLRLAMPGEFTKRAFLNNKLDLIQVEAIIDLINASTESAA 148
G P+ L + L G GLR A GEFT+RAF + KL L +VE + DLI+A TE+
Sbjct: 21 GDPVGARELRTQYLPAGSVPGLRPAEAGEFTRRAFAHGKLSLTEVEGLADLIHAETEAQR 80
Query: 149 KSAMISLSGKFSXXXXXXXXXXXXXRTLIEFSFDFPEEN--QELILNKNDFFNEXXXXXX 206
+ A+ L G+ +E DF E++ +E +L + + ++
Sbjct: 81 RQALRQLDGELGHLCHGWAKTLTKALAHVEAYIDFGEDDNLEEGVLERAN--SQVRELEL 138
Query: 207 XXXXXXXXXXXRALIRNGLNVVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKT 266
+R+G ++V+ G PN GKSSL N L V+IV+ GTTRD +
Sbjct: 139 ALSAHLRDARRGQRLRSGAHIVVTGPPNAGKSSLVNLLSRKPVSIVSPEPGTTRDVLETP 198
Query: 267 IQINKFLFKITDTAGI 282
+ + F ++DTAG+
Sbjct: 199 VDLAGFPALLSDTAGL 214
Score = 100 (40.3 bits), Expect = 4.1e-24, Sum P(2) = 4.1e-24
Identities = 31/96 (32%), Positives = 42/96 (43%)
Query: 377 INLLRNTLLDLIEKTQTIESSPYLARERHIHSLNEANYYLSCAIKIINQSEKNFEKNLEL 436
+ LR L ++ T P L R RH H L C + + + K+L L
Sbjct: 315 LEALRKELAEVCGDPST--GPPLLTRARHQHHLQ------GCLDALSHYKQT---KDLAL 363
Query: 437 IAEDLRFCHEKLSSIIGKSTTNDLLDNIFSQFCIGK 472
AE LR L+ I G T ++LD IF FC+GK
Sbjct: 364 AAEALRLARGHLARITGGGDTEEILDIIFRDFCVGK 399
>UNIPROTKB|Q2GDM7 [details] [associations]
symbol:NSE_0536 "GTPase Der" species:222891 "Neorickettsia
sennetsu str. Miyayama" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00449 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0042254 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG1160 KO:K03977 ProtClustDB:PRK00093 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
HOGENOM:HOG000242862 OMA:TNVLNEV RefSeq:YP_506419.1
ProteinModelPortal:Q2GDM7 STRING:Q2GDM7 GeneID:3931630
KEGG:nse:NSE_0536 PATRIC:22681121
BioCyc:NSEN222891:GHFU-555-MONOMER Uniprot:Q2GDM7
Length = 473
Score = 155 (59.6 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 46/130 (35%), Positives = 65/130 (50%)
Query: 225 LNVVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPD 284
+ V ++GQPNVGKSSL N VG D +V IAGTTRD I+ +Q F++ DTAG+
Sbjct: 174 IKVAILGQPNVGKSSLMNKFVGKDRVLVLPIAGTTRDPISDELQWKCTTFELVDTAGLRK 233
Query: 285 XXXXXXXXXXXXXXXXXXRTWVELKNSDIIIYVQD-ARYD-KHTDFDKKIIKN--FPMNI 340
RT E SD++I++ D + + + DF ++ N
Sbjct: 234 KQRVTDGLEKICNSRAL-RTSAE---SDVVIFMCDISNFTLERQDF---LLMNRILEQGK 286
Query: 341 PVIYVWNKID 350
P+I V NK D
Sbjct: 287 PMILVGNKKD 296
>TIGR_CMR|NSE_0536 [details] [associations]
symbol:NSE_0536 "putative GTP-binding protein EngA"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0005525
"GTP binding" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00449 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0042254 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG1160 KO:K03977 ProtClustDB:PRK00093 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
HOGENOM:HOG000242862 OMA:TNVLNEV RefSeq:YP_506419.1
ProteinModelPortal:Q2GDM7 STRING:Q2GDM7 GeneID:3931630
KEGG:nse:NSE_0536 PATRIC:22681121
BioCyc:NSEN222891:GHFU-555-MONOMER Uniprot:Q2GDM7
Length = 473
Score = 155 (59.6 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 46/130 (35%), Positives = 65/130 (50%)
Query: 225 LNVVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPD 284
+ V ++GQPNVGKSSL N VG D +V IAGTTRD I+ +Q F++ DTAG+
Sbjct: 174 IKVAILGQPNVGKSSLMNKFVGKDRVLVLPIAGTTRDPISDELQWKCTTFELVDTAGLRK 233
Query: 285 XXXXXXXXXXXXXXXXXXRTWVELKNSDIIIYVQD-ARYD-KHTDFDKKIIKN--FPMNI 340
RT E SD++I++ D + + + DF ++ N
Sbjct: 234 KQRVTDGLEKICNSRAL-RTSAE---SDVVIFMCDISNFTLERQDF---LLMNRILEQGK 286
Query: 341 PVIYVWNKID 350
P+I V NK D
Sbjct: 287 PMILVGNKKD 296
>TIGR_CMR|CHY_1919 [details] [associations]
symbol:CHY_1919 "GTP-binding protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0005525 "GTP
binding" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] HAMAP:MF_00195 InterPro:IPR003593 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 SMART:SM00382 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0042254 GO:GO:0017111 eggNOG:COG1160 HOGENOM:HOG000242861
KO:K03977 ProtClustDB:PRK00093 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
OMA:YLENTYR RefSeq:YP_360738.1 ProteinModelPortal:Q3AAU6
STRING:Q3AAU6 GeneID:3728232 KEGG:chy:CHY_1919 PATRIC:21276929
BioCyc:CHYD246194:GJCN-1918-MONOMER Uniprot:Q3AAU6
Length = 440
Score = 158 (60.7 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 41/127 (32%), Positives = 66/127 (51%)
Query: 227 VVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPDXX 286
V ++G+PNVGKS+LFN ++G +AIV G TRD++ + +F + DT G+
Sbjct: 6 VAIVGRPNVGKSTLFNRIIGERIAIVEDTPGVTRDRLYSEAEWQGKVFDLIDTGGLE--- 62
Query: 287 XXXXXXXXXXXXXXXXRTWVE--LKNSDIIIYVQDARYDKHTDFDKKIIKNF-PMNIPVI 343
R +E + +D+I++V D+R + T D+ + KN + PVI
Sbjct: 63 ------FSEDLITTKVREQIEKAINEADLILFVCDSR-EGITSTDEAVAKNLRKSDKPVI 115
Query: 344 YVWNKID 350
V NK+D
Sbjct: 116 LVANKVD 122
Score = 126 (49.4 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 40/129 (31%), Positives = 63/129 (48%)
Query: 225 LNVVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPD 284
+ + ++G+PNVGKSSL N+L+G + +V+ I GTTRD I + + + DTAG+
Sbjct: 177 VKIAVVGRPNVGKSSLVNALLGEERVVVSDIPGTTRDAIDTPMWYQGKPYLLIDTAGM-- 234
Query: 285 XXXXXXXXXXXXXXXXXXRTWVELKNSDIIIYVQDARYDKHTDFDKKI---IKNFPMNIP 341
R+ ++ +D+ + V A + T+ DKKI I +
Sbjct: 235 --RRKSRIEEDLERYSVNRSIKAIRRADVALLVISAE-EGVTEQDKKIAGLIHEYGRG-- 289
Query: 342 VIYVWNKID 350
VI V NK D
Sbjct: 290 VIIVVNKWD 298
Score = 37 (18.1 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 15/65 (23%), Positives = 29/65 (44%)
Query: 369 LSASKRIGINLLRNTLLDLIEKTQTIESSPYL----ARERHIHSLNE--ANYYLSCAIKI 422
L +R+ ++ + T D I+ + PYL A R + E Y ++ +IK
Sbjct: 196 LLGEERVVVSDIPGTTRDAIDTPMWYQGKPYLLIDTAGMRRKSRIEEDLERYSVNRSIKA 255
Query: 423 INQSE 427
I +++
Sbjct: 256 IRRAD 260
>UNIPROTKB|Q81SW9 [details] [associations]
symbol:der "GTPase Der" species:1392 "Bacillus anthracis"
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_00195
InterPro:IPR005225 InterPro:IPR006073 InterPro:IPR016484
Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0042254 RefSeq:NP_843976.1
RefSeq:YP_018148.1 RefSeq:YP_027683.1 ProteinModelPortal:Q81SW9
SMR:Q81SW9 IntAct:Q81SW9 DNASU:1086325
EnsemblBacteria:EBBACT00000011036 EnsemblBacteria:EBBACT00000013653
EnsemblBacteria:EBBACT00000023216 GeneID:1086325 GeneID:2817326
GeneID:2849869 KEGG:ban:BA_1525 KEGG:bar:GBAA_1525 KEGG:bat:BAS1414
eggNOG:COG1160 HOGENOM:HOG000242861 KO:K03977 OMA:IEWISSS
ProtClustDB:PRK00093 BioCyc:BANT260799:GJAJ-1488-MONOMER
BioCyc:BANT261594:GJ7F-1550-MONOMER Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
Uniprot:Q81SW9
Length = 436
Score = 154 (59.3 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 41/125 (32%), Positives = 64/125 (51%)
Query: 227 VVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPDXX 286
+ ++G+PNVGKS++FN +VG V+IV I G TRD+I + F I DT GI
Sbjct: 6 IAIVGRPNVGKSTIFNRIVGERVSIVEDIPGVTRDRIYSAGEWLNHEFNIIDTGGID--- 62
Query: 287 XXXXXXXXXXXXXXXXRTWVELKNSDIIIYVQDARYDKHTDFDKKIIKN-FPMNIPVIYV 345
+ V + +D+II++ + R D T D+++ K + N PV+
Sbjct: 63 ----IGDEPFLTQIRQQAEVAIDEADVIIFMTNGR-DGVTAADEEVAKILYRSNKPVVLA 117
Query: 346 WNKID 350
NK+D
Sbjct: 118 VNKVD 122
Score = 133 (51.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 36/104 (34%), Positives = 54/104 (51%)
Query: 229 LIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPDXXXX 288
LIG+PNVGKSSL N+L+G + IV+++AGTTRD + + + I DTAG+
Sbjct: 180 LIGRPNVGKSSLVNALLGQERVIVSNVAGTTRDAVDTPYSKDGKDYVIIDTAGM----RK 235
Query: 289 XXXXXXXXXXXXXXRTWVELKNSDIIIYVQDARYDKHTDFDKKI 332
R ++ SD+++ V D + + DKKI
Sbjct: 236 KGKVYESTEKYSVLRALRAIERSDVVLVVLDGE-EGIIEQDKKI 278
>TIGR_CMR|BA_1525 [details] [associations]
symbol:BA_1525 "GTPase family protein" species:198094
"Bacillus anthracis str. Ames" [GO:0003924 "GTPase activity"
evidence=ISS] [GO:0005525 "GTP binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_00195 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 GO:GO:0005525 TIGRFAMs:TIGR00231
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0042254
RefSeq:NP_843976.1 RefSeq:YP_018148.1 RefSeq:YP_027683.1
ProteinModelPortal:Q81SW9 SMR:Q81SW9 IntAct:Q81SW9 DNASU:1086325
EnsemblBacteria:EBBACT00000011036 EnsemblBacteria:EBBACT00000013653
EnsemblBacteria:EBBACT00000023216 GeneID:1086325 GeneID:2817326
GeneID:2849869 KEGG:ban:BA_1525 KEGG:bar:GBAA_1525 KEGG:bat:BAS1414
eggNOG:COG1160 HOGENOM:HOG000242861 KO:K03977 OMA:IEWISSS
ProtClustDB:PRK00093 BioCyc:BANT260799:GJAJ-1488-MONOMER
BioCyc:BANT261594:GJ7F-1550-MONOMER Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
Uniprot:Q81SW9
Length = 436
Score = 154 (59.3 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 41/125 (32%), Positives = 64/125 (51%)
Query: 227 VVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPDXX 286
+ ++G+PNVGKS++FN +VG V+IV I G TRD+I + F I DT GI
Sbjct: 6 IAIVGRPNVGKSTIFNRIVGERVSIVEDIPGVTRDRIYSAGEWLNHEFNIIDTGGID--- 62
Query: 287 XXXXXXXXXXXXXXXXRTWVELKNSDIIIYVQDARYDKHTDFDKKIIKN-FPMNIPVIYV 345
+ V + +D+II++ + R D T D+++ K + N PV+
Sbjct: 63 ----IGDEPFLTQIRQQAEVAIDEADVIIFMTNGR-DGVTAADEEVAKILYRSNKPVVLA 117
Query: 346 WNKID 350
NK+D
Sbjct: 118 VNKVD 122
Score = 133 (51.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 36/104 (34%), Positives = 54/104 (51%)
Query: 229 LIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPDXXXX 288
LIG+PNVGKSSL N+L+G + IV+++AGTTRD + + + I DTAG+
Sbjct: 180 LIGRPNVGKSSLVNALLGQERVIVSNVAGTTRDAVDTPYSKDGKDYVIIDTAGM----RK 235
Query: 289 XXXXXXXXXXXXXXRTWVELKNSDIIIYVQDARYDKHTDFDKKI 332
R ++ SD+++ V D + + DKKI
Sbjct: 236 KGKVYESTEKYSVLRALRAIERSDVVLVVLDGE-EGIIEQDKKI 278
>UNIPROTKB|Q2GGW4 [details] [associations]
symbol:engA "GTPase Der" species:205920 "Ehrlichia
chaffeensis str. Arkansas" [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0042254 eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:YP_507319.1 ProteinModelPortal:Q2GGW4
STRING:Q2GGW4 GeneID:3927981 KEGG:ech:ECH_0504 PATRIC:20576480
BioCyc:ECHA205920:GJNR-506-MONOMER Uniprot:Q2GGW4
Length = 442
Score = 151 (58.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 41/129 (31%), Positives = 64/129 (49%)
Query: 225 LNVVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPD 284
L + ++G PNVGKS++FN L AIV++I TRD+ + FKI DT G+ +
Sbjct: 2 LKIAIVGLPNVGKSTIFNRLTSQKSAIVSNIPNLTRDRREGDADLCGLKFKIVDTGGVDN 61
Query: 285 XXXXXXXXXXXXXXXXXXRTWVELKNSDIIIYVQDARY---DKHTDFDKKIIKNFPMNIP 341
+ + ++ SDII +V DAR DK+ +F K + K + P
Sbjct: 62 TIKLSSLVLD--------QVKLSIEESDIIFFVVDARIEHDDKNIEFAKYLRKK--VKKP 111
Query: 342 VIYVWNKID 350
+I + NK +
Sbjct: 112 IILIANKCE 120
>TIGR_CMR|ECH_0504 [details] [associations]
symbol:ECH_0504 "GTP-binding protein EngA" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0042254 eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:YP_507319.1 ProteinModelPortal:Q2GGW4
STRING:Q2GGW4 GeneID:3927981 KEGG:ech:ECH_0504 PATRIC:20576480
BioCyc:ECHA205920:GJNR-506-MONOMER Uniprot:Q2GGW4
Length = 442
Score = 151 (58.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 41/129 (31%), Positives = 64/129 (49%)
Query: 225 LNVVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPD 284
L + ++G PNVGKS++FN L AIV++I TRD+ + FKI DT G+ +
Sbjct: 2 LKIAIVGLPNVGKSTIFNRLTSQKSAIVSNIPNLTRDRREGDADLCGLKFKIVDTGGVDN 61
Query: 285 XXXXXXXXXXXXXXXXXXRTWVELKNSDIIIYVQDARY---DKHTDFDKKIIKNFPMNIP 341
+ + ++ SDII +V DAR DK+ +F K + K + P
Sbjct: 62 TIKLSSLVLD--------QVKLSIEESDIIFFVVDARIEHDDKNIEFAKYLRKK--VKKP 111
Query: 342 VIYVWNKID 350
+I + NK +
Sbjct: 112 IILIANKCE 120
>UNIPROTKB|Q2GKV6 [details] [associations]
symbol:der "GTPase Der" species:212042 "Anaplasma
phagocytophilum HZ" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:CP000235
GenomeReviews:CP000235_GR eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 HOGENOM:HOG000242862
RefSeq:YP_504995.1 ProteinModelPortal:Q2GKV6 STRING:Q2GKV6
GeneID:3931157 KEGG:aph:APH_0390 PATRIC:20949388 OMA:RKKAIVH
BioCyc:APHA212042:GHPM-418-MONOMER Uniprot:Q2GKV6
Length = 440
Score = 146 (56.5 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 50/172 (29%), Positives = 77/172 (44%)
Query: 227 VVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPDXX 286
V ++G PNVGKS+LFN L AIV+ IA TRD+ + F DT G+ D
Sbjct: 4 VAIVGLPNVGKSTLFNRLTRRKSAIVSDIAHVTRDRKEALVDFCGLRFIAIDTGGVADGG 63
Query: 287 XXXXXXXXXXXXXXXXRTWVELKNSDIIIYVQDARY--DKH-TDFDKKIIKNFPMNIPVI 343
+ + L+N+D++++V DA+ D H T K + K N P+I
Sbjct: 64 EIQSLVKT--------QVQLALENADVVLFVIDAQRATDSHSTSLGKWLSKI--TNKPII 113
Query: 344 YVWNKIDYSG---HQXXXXXXXXXXXXXLSASKRIGINLLRNTLLDLIEKTQ 392
V NK + + H +SA +G+ L + LIE+++
Sbjct: 114 LVANKCESNKNNVHVDTMEYLGFLGPVYISAEHNLGMADLYEAIAPLIEQSE 165
Score = 136 (52.9 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 227 VVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGI 282
+ +IGQPNVGKS+ NS++G + I + IAGTTRD I+ +TDTAGI
Sbjct: 177 ISIIGQPNVGKSTFVNSILGEERVITSGIAGTTRDSISAEYSYKGITLLLTDTAGI 232
Score = 43 (20.2 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 10/38 (26%), Positives = 22/38 (57%)
Query: 376 GINLLRNTLLDLIEKTQTIESSPYLARERHIHSLNEAN 413
GI LL + ++T+ E+ L+ + IH+L++++
Sbjct: 221 GITLLLTDTAGIRKRTKVTENMEKLSVQSAIHALSKSH 258
>TIGR_CMR|APH_0390 [details] [associations]
symbol:APH_0390 "putative GTP-binding protein EngA"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0005525 "GTP
binding" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:CP000235
GenomeReviews:CP000235_GR eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 HOGENOM:HOG000242862
RefSeq:YP_504995.1 ProteinModelPortal:Q2GKV6 STRING:Q2GKV6
GeneID:3931157 KEGG:aph:APH_0390 PATRIC:20949388 OMA:RKKAIVH
BioCyc:APHA212042:GHPM-418-MONOMER Uniprot:Q2GKV6
Length = 440
Score = 146 (56.5 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 50/172 (29%), Positives = 77/172 (44%)
Query: 227 VVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPDXX 286
V ++G PNVGKS+LFN L AIV+ IA TRD+ + F DT G+ D
Sbjct: 4 VAIVGLPNVGKSTLFNRLTRRKSAIVSDIAHVTRDRKEALVDFCGLRFIAIDTGGVADGG 63
Query: 287 XXXXXXXXXXXXXXXXRTWVELKNSDIIIYVQDARY--DKH-TDFDKKIIKNFPMNIPVI 343
+ + L+N+D++++V DA+ D H T K + K N P+I
Sbjct: 64 EIQSLVKT--------QVQLALENADVVLFVIDAQRATDSHSTSLGKWLSKI--TNKPII 113
Query: 344 YVWNKIDYSG---HQXXXXXXXXXXXXXLSASKRIGINLLRNTLLDLIEKTQ 392
V NK + + H +SA +G+ L + LIE+++
Sbjct: 114 LVANKCESNKNNVHVDTMEYLGFLGPVYISAEHNLGMADLYEAIAPLIEQSE 165
Score = 136 (52.9 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 227 VVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGI 282
+ +IGQPNVGKS+ NS++G + I + IAGTTRD I+ +TDTAGI
Sbjct: 177 ISIIGQPNVGKSTFVNSILGEERVITSGIAGTTRDSISAEYSYKGITLLLTDTAGI 232
Score = 43 (20.2 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 10/38 (26%), Positives = 22/38 (57%)
Query: 376 GINLLRNTLLDLIEKTQTIESSPYLARERHIHSLNEAN 413
GI LL + ++T+ E+ L+ + IH+L++++
Sbjct: 221 GITLLLTDTAGIRKRTKVTENMEKLSVQSAIHALSKSH 258
>TIGR_CMR|CJE_0435 [details] [associations]
symbol:CJE_0435 "GTPase family protein" species:195099
"Campylobacter jejuni RM1221" [GO:0003924 "GTPase activity"
evidence=ISS] [GO:0005525 "GTP binding" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] HAMAP:MF_00195 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0042254 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG1160 HOGENOM:HOG000242861 KO:K03977 ProtClustDB:PRK00093
Gene3D:3.30.300.20 InterPro:IPR015946 PANTHER:PTHR11649:SF5
TIGRFAMs:TIGR03594 RefSeq:YP_178454.1 HSSP:Q9X1F8
ProteinModelPortal:Q5HW81 STRING:Q5HW81 GeneID:3231197
KEGG:cjr:CJE0435 PATRIC:20042570 OMA:YLENTYR
BioCyc:CJEJ195099:GJC0-440-MONOMER Uniprot:Q5HW81
Length = 460
Score = 146 (56.5 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 40/126 (31%), Positives = 62/126 (49%)
Query: 226 NVVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPDX 285
+++LIG+PNVGKSSLFN + +AI + I+GTTRD I I+ + D+ G+ +
Sbjct: 3 SIILIGKPNVGKSSLFNRMARQRIAITSDISGTTRDTNKTQIHIHSKKAMLIDSGGLDES 62
Query: 286 XXXXXXXXXXXXXXXXXRTWVELKNSDIIIYVQDARYDKHTDFDKKIIKNFP-MNIPVIY 344
T K SDII+Y+ D + D D++ + + P+
Sbjct: 63 DELFKNVKK--------NTLKVAKESDIILYLVDGKLAPD-DEDRQFFYSLKKLGKPIAL 113
Query: 345 VWNKID 350
V NK+D
Sbjct: 114 VINKVD 119
Score = 139 (54.0 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 43/132 (32%), Positives = 68/132 (51%)
Query: 222 RNGLNVVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAG 281
+N + V ++G+ NVGKSSL N+LV + ++V+SIAGTT D + +++ + + DTAG
Sbjct: 193 QNHIRVGIVGRVNVGKSSLLNALVKQERSVVSSIAGTTIDPVNESVVHKDKVIEFVDTAG 252
Query: 282 IPDXXXXXXXXXXXXXXXXXXRTWVELKNSDIIIYVQDARYDKHTDFDKKIIKNFPMN-I 340
I RT L +S I + V DA ++ + D++I + +
Sbjct: 253 I-----RKRGKIQGLERFALNRTEKILSHSQIALLVLDA-HEGFNELDERIAGLVAKHYL 306
Query: 341 PVIYVWNKIDYS 352
VI V NK D S
Sbjct: 307 GVIIVLNKWDKS 318
>UNIPROTKB|Q74AX4 [details] [associations]
symbol:der "GTPase Der" species:243231 "Geobacter
sulfurreducens PCA" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:AE017180
GenomeReviews:AE017180_GR eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 HSSP:Q9X1F8 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:NP_953274.1 ProteinModelPortal:Q74AX4
GeneID:2687605 KEGG:gsu:GSU2225 PATRIC:22027305
BioCyc:GSUL243231:GH27-2172-MONOMER Uniprot:Q74AX4
Length = 438
Score = 141 (54.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 38/126 (30%), Positives = 67/126 (53%)
Query: 227 VVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGI-PDX 285
V ++G+PNVGKS+LFN LVG AIV + G TRD+ +T+ F + DT G P+
Sbjct: 6 VAIVGRPNVGKSTLFNRLVGRRKAIVDDMPGVTRDRNYETVTRFDVPFILIDTGGFEPES 65
Query: 286 XXXXXXXXXXXXXXXXXRTWVELKNSDIIIYVQDARYDKHTDFDKKIIKNFP-MNIPVIY 344
++ + ++ +D+I+++ D R + D ++++ ++ PV +
Sbjct: 66 SDRLLQQMRE-------QSRLAMEEADVILFLMDGRAGLNPA-DVEVVEMLRRVDKPVFF 117
Query: 345 VWNKID 350
V NK+D
Sbjct: 118 VVNKVD 123
Score = 137 (53.3 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 39/130 (30%), Positives = 62/130 (47%)
Query: 222 RNGLNVVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAG 281
RN + ++G+PNVGKSSL N L+G + + GTTRD + NK + + DTAG
Sbjct: 174 RNATKIAVVGRPNVGKSSLVNRLLGYERVVANPTPGTTRDSVDTWFTCNKKRYLLIDTAG 233
Query: 282 IPDXXXXXXXXXXXXXXXXXXRTWVELKNSDIIIYVQDARYDKHTDFDKKIIKN-FPMNI 340
I R+ ++ +D+++ V +A + T+ D++I F
Sbjct: 234 IR-RKGKTTQKIEKYSVVDSLRS---IERADVVLIVLNAE-EGVTEQDERIAGYAFEAGK 288
Query: 341 PVIYVWNKID 350
I+V NK D
Sbjct: 289 ACIFVVNKWD 298
>TIGR_CMR|GSU_2225 [details] [associations]
symbol:GSU_2225 "GTP-binding protein Era, putative"
species:243231 "Geobacter sulfurreducens PCA" [GO:0005525 "GTP
binding" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:AE017180
GenomeReviews:AE017180_GR eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 HSSP:Q9X1F8 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:NP_953274.1 ProteinModelPortal:Q74AX4
GeneID:2687605 KEGG:gsu:GSU2225 PATRIC:22027305
BioCyc:GSUL243231:GH27-2172-MONOMER Uniprot:Q74AX4
Length = 438
Score = 141 (54.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 38/126 (30%), Positives = 67/126 (53%)
Query: 227 VVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGI-PDX 285
V ++G+PNVGKS+LFN LVG AIV + G TRD+ +T+ F + DT G P+
Sbjct: 6 VAIVGRPNVGKSTLFNRLVGRRKAIVDDMPGVTRDRNYETVTRFDVPFILIDTGGFEPES 65
Query: 286 XXXXXXXXXXXXXXXXXRTWVELKNSDIIIYVQDARYDKHTDFDKKIIKNFP-MNIPVIY 344
++ + ++ +D+I+++ D R + D ++++ ++ PV +
Sbjct: 66 SDRLLQQMRE-------QSRLAMEEADVILFLMDGRAGLNPA-DVEVVEMLRRVDKPVFF 117
Query: 345 VWNKID 350
V NK+D
Sbjct: 118 VVNKVD 123
Score = 137 (53.3 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 39/130 (30%), Positives = 62/130 (47%)
Query: 222 RNGLNVVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAG 281
RN + ++G+PNVGKSSL N L+G + + GTTRD + NK + + DTAG
Sbjct: 174 RNATKIAVVGRPNVGKSSLVNRLLGYERVVANPTPGTTRDSVDTWFTCNKKRYLLIDTAG 233
Query: 282 IPDXXXXXXXXXXXXXXXXXXRTWVELKNSDIIIYVQDARYDKHTDFDKKIIKN-FPMNI 340
I R+ ++ +D+++ V +A + T+ D++I F
Sbjct: 234 IR-RKGKTTQKIEKYSVVDSLRS---IERADVVLIVLNAE-EGVTEQDERIAGYAFEAGK 288
Query: 341 PVIYVWNKID 350
I+V NK D
Sbjct: 289 ACIFVVNKWD 298
>TIGR_CMR|APH_0350 [details] [associations]
symbol:APH_0350 "GTP-binding protein Era" species:212042
"Anaplasma phagocytophilum HZ" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0016049 "cell growth" evidence=ISS]
HAMAP:MF_00367 InterPro:IPR004044 InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 InterPro:IPR009019
Pfam:PF01926 Pfam:PF07650 PROSITE:PS50823 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737 GO:GO:0003924
GO:GO:0006184 EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0042274
GO:GO:0070181 Gene3D:3.30.300.20 InterPro:IPR015946 OMA:ITREQLF
SUPFAM:SSF54814 eggNOG:COG1159 KO:K03595 ProtClustDB:PRK00089
TIGRFAMs:TIGR00436 HOGENOM:HOG000245597 RefSeq:YP_504957.1
ProteinModelPortal:Q2GKZ4 STRING:Q2GKZ4 GeneID:3930686
KEGG:aph:APH_0350 PATRIC:20949290
BioCyc:APHA212042:GHPM-379-MONOMER Uniprot:Q2GKZ4
Length = 305
Score = 134 (52.2 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 42/127 (33%), Positives = 57/127 (44%)
Query: 227 VVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPDXX 286
V ++G N GKS+L N LVG +IVT+ TTR K+ + TDT GI
Sbjct: 22 VAVVGMTNAGKSTLINKLVGFKASIVTNKVHTTRVKMNSVLNEGNVQLVFTDTPGI---- 77
Query: 287 XXXXXXXXXXXXXXXXRTWVELKNSDIIIYVQDA--RYDKHTDFDKKIIKNFPM-NIPVI 343
W+ +K +D++I V DA R H + KIIK N+ I
Sbjct: 78 ---FSPKTKLEKFIVKNAWMSMKGADMVILVLDAKRRICVHVE---KIIKRLQRDNVASI 131
Query: 344 YVWNKID 350
V NK+D
Sbjct: 132 AVINKMD 138
>UNIPROTKB|Q83C83 [details] [associations]
symbol:der "GTPase Der" species:227377 "Coxiella burnetii
RSA 493" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:AE016828
GenomeReviews:AE016828_GR eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:NP_820240.1 ProteinModelPortal:Q83C83
PRIDE:Q83C83 GeneID:1209150 KEGG:cbu:CBU_1245 PATRIC:17931225
BioCyc:CBUR227377:GJ7S-1232-MONOMER Uniprot:Q83C83
Length = 443
Score = 135 (52.6 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 38/128 (29%), Positives = 61/128 (47%)
Query: 224 GLNVVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIP 283
G+ + +IG+PNVGKS+L N L+G + IV GTTRD I N + + DTAGI
Sbjct: 175 GIKIAMIGRPNVGKSTLINRLLGEERVIVYDQPGTTRDSIYIPFARNDENYTLIDTAGI- 233
Query: 284 DXXXXXXXXXXXXXXXXXXRTWVELKNSDIIIYVQDARYDKHTDFDKKIIKNF-PMNIPV 342
++ + +D++I++ DAR T+ D +++ + +
Sbjct: 234 ---RRRAKIQDYVEKFSMIKSLQAMHAADVVIFLLDARQGV-TEQDLRLLNRIVEAGVSL 289
Query: 343 IYVWNKID 350
I NK D
Sbjct: 290 IIAVNKWD 297
>TIGR_CMR|CBU_1245 [details] [associations]
symbol:CBU_1245 "GTP-binding protein" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] [GO:0005525 "GTP binding" evidence=ISS] HAMAP:MF_00195
InterPro:IPR005225 InterPro:IPR006073 InterPro:IPR016484
Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:AE016828
GenomeReviews:AE016828_GR eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:NP_820240.1 ProteinModelPortal:Q83C83
PRIDE:Q83C83 GeneID:1209150 KEGG:cbu:CBU_1245 PATRIC:17931225
BioCyc:CBUR227377:GJ7S-1232-MONOMER Uniprot:Q83C83
Length = 443
Score = 135 (52.6 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 38/128 (29%), Positives = 61/128 (47%)
Query: 224 GLNVVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIP 283
G+ + +IG+PNVGKS+L N L+G + IV GTTRD I N + + DTAGI
Sbjct: 175 GIKIAMIGRPNVGKSTLINRLLGEERVIVYDQPGTTRDSIYIPFARNDENYTLIDTAGI- 233
Query: 284 DXXXXXXXXXXXXXXXXXXRTWVELKNSDIIIYVQDARYDKHTDFDKKIIKNF-PMNIPV 342
++ + +D++I++ DAR T+ D +++ + +
Sbjct: 234 ---RRRAKIQDYVEKFSMIKSLQAMHAADVVIFLLDARQGV-TEQDLRLLNRIVEAGVSL 289
Query: 343 IYVWNKID 350
I NK D
Sbjct: 290 IIAVNKWD 297
>UNIPROTKB|P64057 [details] [associations]
symbol:der "GTPase Der" species:1773 "Mycobacterium
tuberculosis" [GO:0005618 "cell wall" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0040007 "growth" evidence=IMP]
HAMAP:MF_00195 InterPro:IPR003593 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 SMART:SM00382 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0040007 GO:GO:0005618
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
GO:GO:0042254 EMBL:BX842577 GO:GO:0017111 eggNOG:COG1160
HOGENOM:HOG000242861 KO:K03977 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
PIR:H70504 RefSeq:NP_216229.1 RefSeq:NP_336210.1
RefSeq:YP_006515108.1 ProteinModelPortal:P64057 SMR:P64057
PRIDE:P64057 EnsemblBacteria:EBMYCT00000000320
EnsemblBacteria:EBMYCT00000071863 GeneID:13316498 GeneID:885086
GeneID:923951 KEGG:mtc:MT1753 KEGG:mtu:Rv1713 KEGG:mtv:RVBD_1713
PATRIC:18125608 TubercuList:Rv1713 OMA:NCFLVIN ProtClustDB:PRK03003
Uniprot:P64057
Length = 463
Score = 132 (51.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 36/125 (28%), Positives = 59/125 (47%)
Query: 227 VVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPDXX 286
V L+G+PNVGKSSL N L G ++V AGTT D + I++ +++ DTAG+
Sbjct: 202 VALVGKPNVGKSSLLNKLAGDQRSVVHEAAGTTVDPVDSLIELGGDVWRFVDTAGL---- 257
Query: 287 XXXXXXXXXXXXXXXXRTWVELKNSDIIIYVQDARYDKHTDFDKKIIKN-FPMNIPVIYV 345
RT + ++++ I + DA T+ D ++I ++
Sbjct: 258 RRKVGQASGHEFYASVRTHAAIDSAEVAIVLIDASQPL-TEQDLRVISMVIEAGRALVLA 316
Query: 346 WNKID 350
+NK D
Sbjct: 317 YNKWD 321
>TAIR|locus:2099277 [details] [associations]
symbol:emb2738 "embryo defective 2738" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0009793 "embryo
development ending in seed dormancy" evidence=NAS] [GO:0009507
"chloroplast" evidence=IDA] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006399 "tRNA metabolic process" evidence=RCA]
[GO:0009658 "chloroplast organization" evidence=RCA] HAMAP:MF_00195
InterPro:IPR005225 InterPro:IPR006073 InterPro:IPR016484
Pfam:PF01926 PRINTS:PR00326 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR
eggNOG:COG1160 HOGENOM:HOG000242861 OMA:IEWISSS Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
EMBL:BT046184 IPI:IPI00529367 RefSeq:NP_187815.2 UniGene:At.21430
ProteinModelPortal:B5X565 SMR:B5X565 STRING:B5X565 PaxDb:B5X565
PRIDE:B5X565 EnsemblPlants:AT3G12080.1 GeneID:820382
KEGG:ath:AT3G12080 TAIR:At3g12080 PhylomeDB:B5X565
ProtClustDB:CLSN2918072 Genevestigator:B5X565 Uniprot:B5X565
Length = 663
Score = 132 (51.5 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 32/95 (33%), Positives = 49/95 (51%)
Query: 227 VVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQ-INKFLFKITDTAGIPDX 285
+ +IG+PNVGKSS+ N+LV D IV+ ++GTTRD I + F++ DTAGI
Sbjct: 371 IAIIGRPNVGKSSILNALVREDRTIVSPVSGTTRDAIDAEFTGPDGEKFRLIDTAGIRKK 430
Query: 286 XXXXXXXXXXXXXXXXXRTWVELKNSDIIIYVQDA 320
R + ++ SD++ V +A
Sbjct: 431 SSVASSGSTTEAMSVN-RAFRAIRRSDVVALVIEA 464
Score = 119 (46.9 bits), Expect = 0.00068, P = 0.00068
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 227 VVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGI 282
V ++G+PNVGKS+LFN LVG + AIV G TRD++ F + DT G+
Sbjct: 161 VAIVGRPNVGKSALFNRLVGENRAIVVDEPGVTRDRLYGRSYWGDQEFVVVDTGGV 216
>UNIPROTKB|Q47WC5 [details] [associations]
symbol:der "GTPase Der" species:167879 "Colwellia
psychrerythraea 34H" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR003593 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 SMART:SM00382 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0017111 eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 OMA:YLENTYR
RefSeq:YP_270897.1 ProteinModelPortal:Q47WC5 STRING:Q47WC5
GeneID:3520024 KEGG:cps:CPS_4247 PATRIC:21471359
HOGENOM:HOG000242862 BioCyc:CPSY167879:GI48-4257-MONOMER
Uniprot:Q47WC5
Length = 498
Score = 130 (50.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 39/125 (31%), Positives = 60/125 (48%)
Query: 227 VVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPDXX 286
V L+G+PNVGKS+LFN L S A+V G TRD+ ++ + F + DT GI
Sbjct: 5 VALVGRPNVGKSTLFNRLTRSRDALVADYPGLTRDRQYGQAEVEEHPFIVIDTGGI---- 60
Query: 287 XXXXXXXXXXXXXXXXRTWVELKNSDIIIYVQDARYDKHTDFDKKIIKNF-PMNIPVIYV 345
++ + ++ +D ++++ DAR D T D I + N + V
Sbjct: 61 ---NGDEQGIDVKMAEQSLMAIEEADAVLFLVDAR-DGLTAADHGIADHLRKQNKKIFVV 116
Query: 346 WNKID 350
NKID
Sbjct: 117 ANKID 121
Score = 119 (46.9 bits), Expect = 0.00045, P = 0.00045
Identities = 23/58 (39%), Positives = 38/58 (65%)
Query: 225 LNVVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGI 282
+ + +IG+PNVGKS+L N ++G + +V + GTTRD + ++ N + + DTAGI
Sbjct: 213 IKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSVYIPMERNGREYTLIDTAGI 270
>TIGR_CMR|CPS_4247 [details] [associations]
symbol:CPS_4247 "GTP-binding protein EngA" species:167879
"Colwellia psychrerythraea 34H" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR003593 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 SMART:SM00382 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0017111 eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 OMA:YLENTYR
RefSeq:YP_270897.1 ProteinModelPortal:Q47WC5 STRING:Q47WC5
GeneID:3520024 KEGG:cps:CPS_4247 PATRIC:21471359
HOGENOM:HOG000242862 BioCyc:CPSY167879:GI48-4257-MONOMER
Uniprot:Q47WC5
Length = 498
Score = 130 (50.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 39/125 (31%), Positives = 60/125 (48%)
Query: 227 VVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPDXX 286
V L+G+PNVGKS+LFN L S A+V G TRD+ ++ + F + DT GI
Sbjct: 5 VALVGRPNVGKSTLFNRLTRSRDALVADYPGLTRDRQYGQAEVEEHPFIVIDTGGI---- 60
Query: 287 XXXXXXXXXXXXXXXXRTWVELKNSDIIIYVQDARYDKHTDFDKKIIKNF-PMNIPVIYV 345
++ + ++ +D ++++ DAR D T D I + N + V
Sbjct: 61 ---NGDEQGIDVKMAEQSLMAIEEADAVLFLVDAR-DGLTAADHGIADHLRKQNKKIFVV 116
Query: 346 WNKID 350
NKID
Sbjct: 117 ANKID 121
Score = 119 (46.9 bits), Expect = 0.00045, P = 0.00045
Identities = 23/58 (39%), Positives = 38/58 (65%)
Query: 225 LNVVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGI 282
+ + +IG+PNVGKS+L N ++G + +V + GTTRD + ++ N + + DTAGI
Sbjct: 213 IKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSVYIPMERNGREYTLIDTAGI 270
>UNIPROTKB|Q3Z6P5 [details] [associations]
symbol:der "GTPase Der" species:243164 "Dehalococcoides
ethenogenes 195" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR003593 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 SMART:SM00382 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0017111 eggNOG:COG1160
HOGENOM:HOG000242861 KO:K03977 OMA:IEWISSS ProtClustDB:PRK00093
Gene3D:3.30.300.20 InterPro:IPR015946 PANTHER:PTHR11649:SF5
TIGRFAMs:TIGR03594 RefSeq:YP_182104.1 ProteinModelPortal:Q3Z6P5
STRING:Q3Z6P5 GeneID:3229314 KEGG:det:DET1395 PATRIC:21609817
BioCyc:DETH243164:GJNF-1396-MONOMER Uniprot:Q3Z6P5
Length = 441
Score = 129 (50.5 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 26/60 (43%), Positives = 39/60 (65%)
Query: 223 NGLNVVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGI 282
N + + L+G+ NVGKS+L N+ +G + +IV++I GTTRD I + N + DTAGI
Sbjct: 178 NSVKLALVGRTNVGKSTLLNTFMGQERSIVSNIPGTTRDAIDTPLNFNGTNVLLIDTAGI 237
Score = 121 (47.7 bits), Expect = 0.00023, P = 0.00023
Identities = 38/128 (29%), Positives = 64/128 (50%)
Query: 227 VVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQ-INKFLFKITDTAGI-PD 284
+ ++G+ NVGKS+L N L ++AI + GTTRD++ T+ +++ L + DT G+ PD
Sbjct: 8 IAIVGRQNVGKSTLLNRLAHKNLAITEDLPGTTRDRLFTTVSWLDRRLIMV-DTGGLDPD 66
Query: 285 XXXXXXXXXXXXXXXXXXRTWVELKNSDIIIYVQDARYDKHT-DFDKK-IIKNFPMNIPV 342
+ +K +D+++ V D + T D++ II+ PV
Sbjct: 67 LESIIGQQVNIQIS-------LAIKEADLVLLVVDVKAGLITPDYEMADIIRR--TGKPV 117
Query: 343 IYVWNKID 350
I V NK D
Sbjct: 118 ILVANKAD 125
>TIGR_CMR|DET_1395 [details] [associations]
symbol:DET_1395 "GTP-binding protein" species:243164
"Dehalococcoides ethenogenes 195" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR003593 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 SMART:SM00382 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0017111 eggNOG:COG1160
HOGENOM:HOG000242861 KO:K03977 OMA:IEWISSS ProtClustDB:PRK00093
Gene3D:3.30.300.20 InterPro:IPR015946 PANTHER:PTHR11649:SF5
TIGRFAMs:TIGR03594 RefSeq:YP_182104.1 ProteinModelPortal:Q3Z6P5
STRING:Q3Z6P5 GeneID:3229314 KEGG:det:DET1395 PATRIC:21609817
BioCyc:DETH243164:GJNF-1396-MONOMER Uniprot:Q3Z6P5
Length = 441
Score = 129 (50.5 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 26/60 (43%), Positives = 39/60 (65%)
Query: 223 NGLNVVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGI 282
N + + L+G+ NVGKS+L N+ +G + +IV++I GTTRD I + N + DTAGI
Sbjct: 178 NSVKLALVGRTNVGKSTLLNTFMGQERSIVSNIPGTTRDAIDTPLNFNGTNVLLIDTAGI 237
Score = 121 (47.7 bits), Expect = 0.00023, P = 0.00023
Identities = 38/128 (29%), Positives = 64/128 (50%)
Query: 227 VVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQ-INKFLFKITDTAGI-PD 284
+ ++G+ NVGKS+L N L ++AI + GTTRD++ T+ +++ L + DT G+ PD
Sbjct: 8 IAIVGRQNVGKSTLLNRLAHKNLAITEDLPGTTRDRLFTTVSWLDRRLIMV-DTGGLDPD 66
Query: 285 XXXXXXXXXXXXXXXXXXRTWVELKNSDIIIYVQDARYDKHT-DFDKK-IIKNFPMNIPV 342
+ +K +D+++ V D + T D++ II+ PV
Sbjct: 67 LESIIGQQVNIQIS-------LAIKEADLVLLVVDVKAGLITPDYEMADIIRR--TGKPV 117
Query: 343 IYVWNKID 350
I V NK D
Sbjct: 118 ILVANKAD 125
>TIGR_CMR|CHY_0430 [details] [associations]
symbol:CHY_0430 "GTP-binding protein Era" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005525 "GTP binding" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] HAMAP:MF_00367
InterPro:IPR004044 InterPro:IPR005225 InterPro:IPR005662
InterPro:IPR006073 InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650
PRINTS:PR00326 PROSITE:PS50823 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0005737 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0042254 GO:GO:0019843 Gene3D:3.30.300.20 InterPro:IPR015946
OMA:ITREQLF SUPFAM:SSF54814 eggNOG:COG1159 HOGENOM:HOG000245596
KO:K03595 TIGRFAMs:TIGR00436 RefSeq:YP_359291.1
ProteinModelPortal:Q3AEZ3 STRING:Q3AEZ3 GeneID:3728261
KEGG:chy:CHY_0430 PATRIC:21274021
BioCyc:CHYD246194:GJCN-431-MONOMER Uniprot:Q3AEZ3
Length = 298
Score = 124 (48.7 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 51/222 (22%), Positives = 95/222 (42%)
Query: 227 VVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPDXX 286
V ++G+PNVGKS+L N +VG+ +AI++ TTR+KI + K DT G+
Sbjct: 8 VSIVGRPNVGKSTLLNQVVGTKIAIMSDKPQTTRNKIRAVLTSEKGQIIFIDTPGVQKPR 67
Query: 287 XXXXXXXXXXXXXXXXRTWVELKNSDIIIYVQDARYDKHTDFDKKIIKNFP-MNIPVIYV 345
+ L D+++YV +A + ++K + P+I V
Sbjct: 68 NKLGEFMLK-------QALTSLDEVDVLLYVVEANSPIGPQ-ENYLLKTLAEVKTPIILV 119
Query: 346 WNKIDYSGHQXXXXXXXXXXXXXLSASKRIGINLLRNT-LLDLIEKTQTI--ESSPYLAR 402
NKID L +K I+ L T + +L+E + E PY
Sbjct: 120 VNKIDVV-KMIEAQTLARQIESRLKVAKTYYISALNGTGVSELVEGIFELLPEGPPYYP- 177
Query: 403 ERHIHSLNEANYYLSCAIK--IINQSEKNFEKNLELIAEDLR 442
E + E + ++ I+ I++ + + ++ ++ E+++
Sbjct: 178 EGQVTDYPE-RFIIAEYIREQILHLTREEIPHSVAVVVEEIK 218
>UNIPROTKB|P37214 [details] [associations]
symbol:era "GTPase Era" species:210007 "Streptococcus
mutans UA159" [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005525 "GTP binding" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006184 "GTP catabolic process" evidence=IDA] [GO:0019003 "GDP
binding" evidence=IDA] HAMAP:MF_00367 InterPro:IPR004044
InterPro:IPR005225 InterPro:IPR005662 InterPro:IPR006073
InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650 PROSITE:PS50823
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737
GO:GO:0003924 GO:GO:0042254 GO:GO:0019843 GO:GO:0019003
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
eggNOG:COG1159 KO:K03595 ProtClustDB:PRK00089 TIGRFAMs:TIGR00436
OMA:KVAKDWQ EMBL:L03428 EMBL:AE014133 RefSeq:NP_721952.1
ProteinModelPortal:P37214 EnsemblBacteria:EBSTRT00000013881
GeneID:1028847 GenomeReviews:AE014133_GR KEGG:smu:SMU_1617
PATRIC:19665223 SABIO-RK:P37214 Uniprot:P37214
Length = 299
Score = 124 (48.7 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 38/125 (30%), Positives = 57/125 (45%)
Query: 227 VVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPDXX 286
V ++G+PNVGKS+ N ++G +AI++ A TTR+KI +K DT GI
Sbjct: 8 VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGIHKPK 67
Query: 287 XXXXXXXXXXXXXXXXRTWVELKNSDIIIYVQDARYDKHTDFDKKIIKNFPM-NIPVIYV 345
L+ D ++++ A +K D II+ +PVI V
Sbjct: 68 TALGDFMVESAYST-------LREVDTVLFMVPAD-EKRGKGDNMIIERLKAAKVPVILV 119
Query: 346 WNKID 350
NKID
Sbjct: 120 INKID 124
>UNIPROTKB|Q9KTW7 [details] [associations]
symbol:der "GTPase Der" species:243277 "Vibrio cholerae O1
biovar El Tor str. N16961" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_00195
InterPro:IPR003593 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
SMART:SM00382 GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0042254 GO:GO:0017111
eggNOG:COG1160 KO:K03977 ProtClustDB:PRK00093 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
PIR:B82284 RefSeq:NP_230412.1 ProteinModelPortal:Q9KTW7
DNASU:2615306 GeneID:2615306 KEGG:vch:VC0763 PATRIC:20080637
OMA:TNVLNEV Uniprot:Q9KTW7
Length = 494
Score = 126 (49.4 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 34/128 (26%), Positives = 67/128 (52%)
Query: 225 LNVVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPD 284
+ + +IG+PNVGKS+L N ++G + +V + GTTRD I ++ ++ + + DTAG+
Sbjct: 206 IKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREYVLIDTAGV-- 263
Query: 285 XXXXXXXXXXXXXXXXXXRTWVELKNSDIIIYVQDARYDKHTDFDKKIIKNFPMNI--PV 342
+T ++++++++ V DAR + +D D ++ F +N +
Sbjct: 264 --RRRKRINETVEKFSVVKTLQAIEDANVVLLVVDAR-ENISDQDLSLL-GFALNSGRSI 319
Query: 343 IYVWNKID 350
+ NK D
Sbjct: 320 VIAVNKWD 327
Score = 125 (49.1 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 36/125 (28%), Positives = 60/125 (48%)
Query: 227 VVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPDXX 286
V L+G+PNVGKS+LFN L + A+V G TRD+ ++ + F + DT GI
Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGIDGSE 64
Query: 287 XXXXXXXXXXXXXXXXRTWVELKNSDIIIYVQDARYDKHTDFDKKIIKNFP-MNIPVIYV 345
++ + +D+++++ D R T D+ I ++ + P I V
Sbjct: 65 EGVETKMAQ-------QSLAAIDEADVVLFMVDGRAGL-TVADEAIAQHLRRIEKPAILV 116
Query: 346 WNKID 350
NK+D
Sbjct: 117 VNKVD 121
>TIGR_CMR|VC_0763 [details] [associations]
symbol:VC_0763 "GTP-binding protein" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_00195
InterPro:IPR003593 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
SMART:SM00382 GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0042254 GO:GO:0017111
eggNOG:COG1160 KO:K03977 ProtClustDB:PRK00093 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
PIR:B82284 RefSeq:NP_230412.1 ProteinModelPortal:Q9KTW7
DNASU:2615306 GeneID:2615306 KEGG:vch:VC0763 PATRIC:20080637
OMA:TNVLNEV Uniprot:Q9KTW7
Length = 494
Score = 126 (49.4 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 34/128 (26%), Positives = 67/128 (52%)
Query: 225 LNVVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPD 284
+ + +IG+PNVGKS+L N ++G + +V + GTTRD I ++ ++ + + DTAG+
Sbjct: 206 IKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMKRDEREYVLIDTAGV-- 263
Query: 285 XXXXXXXXXXXXXXXXXXRTWVELKNSDIIIYVQDARYDKHTDFDKKIIKNFPMNI--PV 342
+T ++++++++ V DAR + +D D ++ F +N +
Sbjct: 264 --RRRKRINETVEKFSVVKTLQAIEDANVVLLVVDAR-ENISDQDLSLL-GFALNSGRSI 319
Query: 343 IYVWNKID 350
+ NK D
Sbjct: 320 VIAVNKWD 327
Score = 125 (49.1 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 36/125 (28%), Positives = 60/125 (48%)
Query: 227 VVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPDXX 286
V L+G+PNVGKS+LFN L + A+V G TRD+ ++ + F + DT GI
Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGQAKLGEHEFIVIDTGGIDGSE 64
Query: 287 XXXXXXXXXXXXXXXXRTWVELKNSDIIIYVQDARYDKHTDFDKKIIKNFP-MNIPVIYV 345
++ + +D+++++ D R T D+ I ++ + P I V
Sbjct: 65 EGVETKMAQ-------QSLAAIDEADVVLFMVDGRAGL-TVADEAIAQHLRRIEKPAILV 116
Query: 346 WNKID 350
NK+D
Sbjct: 117 VNKVD 121
>GENEDB_PFALCIPARUM|PFL0835w [details] [associations]
symbol:PFL0835w "GTP-binding protein, putative"
species:5833 "Plasmodium falciparum" [GO:0008150
"biological_process" evidence=ND] [GO:0020011 "apicoplast"
evidence=RCA] HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PRINTS:PR00326 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:AE014188 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
HSSP:P44681 RefSeq:XP_001350575.1 ProteinModelPortal:Q8I5N5
IntAct:Q8I5N5 MINT:MINT-1620139 EnsemblProtists:PFL0835w:mRNA
GeneID:811219 KEGG:pfa:PFL0835w EuPathDB:PlasmoDB:PF3D7_1217300
ProtClustDB:CLSZ2432227 Uniprot:Q8I5N5
Length = 874
Score = 129 (50.5 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 32/102 (31%), Positives = 53/102 (51%)
Query: 222 RNGLNVVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKF--LFKITDT 279
+N +N+ IG+PN GKSS+ N ++ + IV+ +AGTT D I +++ + ++++ DT
Sbjct: 570 QNTINISFIGKPNTGKSSILNKILNCNRFIVSPLAGTTVDSIDVLVKLKQSDRIYRLIDT 629
Query: 280 AGIPDXXXXX-XXXXXXXXXXXXXRTWVELKNSDIIIYVQDA 320
AGI RT +K SD+ I V D+
Sbjct: 630 AGIQKRKKNVPFNNKTKYEYLLYNRTEKAIKRSDVCILVIDS 671
>UNIPROTKB|Q8I5N5 [details] [associations]
symbol:PFL0835w "GTP binding protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0008150
"biological_process" evidence=ND] [GO:0020011 "apicoplast"
evidence=RCA] HAMAP:MF_00195 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PRINTS:PR00326 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:AE014188 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
HSSP:P44681 RefSeq:XP_001350575.1 ProteinModelPortal:Q8I5N5
IntAct:Q8I5N5 MINT:MINT-1620139 EnsemblProtists:PFL0835w:mRNA
GeneID:811219 KEGG:pfa:PFL0835w EuPathDB:PlasmoDB:PF3D7_1217300
ProtClustDB:CLSZ2432227 Uniprot:Q8I5N5
Length = 874
Score = 129 (50.5 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 32/102 (31%), Positives = 53/102 (51%)
Query: 222 RNGLNVVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKF--LFKITDT 279
+N +N+ IG+PN GKSS+ N ++ + IV+ +AGTT D I +++ + ++++ DT
Sbjct: 570 QNTINISFIGKPNTGKSSILNKILNCNRFIVSPLAGTTVDSIDVLVKLKQSDRIYRLIDT 629
Query: 280 AGIPDXXXXX-XXXXXXXXXXXXXRTWVELKNSDIIIYVQDA 320
AGI RT +K SD+ I V D+
Sbjct: 630 AGIQKRKKNVPFNNKTKYEYLLYNRTEKAIKRSDVCILVIDS 671
>UNIPROTKB|Q5LR04 [details] [associations]
symbol:der "GTPase Der" species:246200 "Ruegeria pomeroyi
DSS-3" [GO:0008150 "biological_process" evidence=ND] HAMAP:MF_00195
InterPro:IPR001806 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00449
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0042254 eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 HSSP:Q9X1F8 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:YP_167551.1 ProteinModelPortal:Q5LR04
GeneID:3194590 KEGG:sil:SPO2328 PATRIC:23378019 Uniprot:Q5LR04
Length = 487
Score = 125 (49.1 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 25/58 (43%), Positives = 36/58 (62%)
Query: 225 LNVVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGI 282
L + ++G+PNVGKS+LFN LVG +A+V G TRD ++ F + DTAG+
Sbjct: 3 LTLAIVGRPNVGKSTLFNRLVGKRLALVDDQPGVTRDLREGQARLGDLRFTVIDTAGL 60
Score = 117 (46.2 bits), Expect = 0.00073, P = 0.00073
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 225 LNVVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGI 282
L V ++G+PN GKS+L N ++G D + AG TRD I+ I N +I DTAG+
Sbjct: 203 LQVAVVGRPNAGKSTLINRILGEDRLLTGPEAGITRDAISLQIDWNDTPMRIFDTAGM 260
>TIGR_CMR|SPO_2328 [details] [associations]
symbol:SPO_2328 "GTP-binding protein EngA" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_00195
InterPro:IPR001806 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00449
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0042254 eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 HSSP:Q9X1F8 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:YP_167551.1 ProteinModelPortal:Q5LR04
GeneID:3194590 KEGG:sil:SPO2328 PATRIC:23378019 Uniprot:Q5LR04
Length = 487
Score = 125 (49.1 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 25/58 (43%), Positives = 36/58 (62%)
Query: 225 LNVVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGI 282
L + ++G+PNVGKS+LFN LVG +A+V G TRD ++ F + DTAG+
Sbjct: 3 LTLAIVGRPNVGKSTLFNRLVGKRLALVDDQPGVTRDLREGQARLGDLRFTVIDTAGL 60
Score = 117 (46.2 bits), Expect = 0.00073, P = 0.00073
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 225 LNVVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGI 282
L V ++G+PN GKS+L N ++G D + AG TRD I+ I N +I DTAG+
Sbjct: 203 LQVAVVGRPNAGKSTLINRILGEDRLLTGPEAGITRDAISLQIDWNDTPMRIFDTAGM 260
>ZFIN|ZDB-GENE-060526-84 [details] [associations]
symbol:eral1 "Era G-protein-like 1 (E. coli)"
species:7955 "Danio rerio" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=ISS] [GO:0000028 "ribosomal small subunit
assembly" evidence=ISS] [GO:0005759 "mitochondrial matrix"
evidence=ISS] [GO:0019843 "rRNA binding" evidence=IEA;ISS]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] InterPro:IPR001806
InterPro:IPR004044 InterPro:IPR005225 InterPro:IPR005662
InterPro:IPR006073 InterPro:IPR009019 Pfam:PF01926 Pfam:PF07650
PRINTS:PR00449 PROSITE:PS50823 ZFIN:ZDB-GENE-060526-84
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0005743
GO:GO:0005759 GO:GO:0019843 GO:GO:0000028 GO:GO:0043024
Gene3D:3.30.300.20 InterPro:IPR015946 CTD:26284
GeneTree:ENSGT00390000013800 HOGENOM:HOG000245598 SUPFAM:SSF54814
eggNOG:COG1159 HOVERGEN:HBG051495 OrthoDB:EOG44XJGX EMBL:BX548073
EMBL:BC163468 EMBL:BC163480 IPI:IPI00799669 RefSeq:NP_001122219.1
UniGene:Dr.155067 ProteinModelPortal:B0S6U7 STRING:B0S6U7
Ensembl:ENSDART00000083778 GeneID:569087 KEGG:dre:569087
OMA:TTTRNIS NextBio:20889500 Bgee:B0S6U7 Uniprot:B0S6U7
Length = 447
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 35/130 (26%), Positives = 59/130 (45%)
Query: 225 LNVVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPD 284
L V ++G PN GKS+L N L+G + V+S TTR + + N + DT G+
Sbjct: 111 LKVAIVGSPNAGKSTLTNQLLGRKLFAVSSKVHTTRSRAVGVLTENDTQIVLLDTPGLTT 170
Query: 285 XXXXXXXXXXXXXXXXXXRTWVELKNSDIIIYVQDARYDKHT--DFDKKIIKNFPMN--I 340
++ LK +D+++ + D DK T +++K +N +
Sbjct: 171 QIKAKRHQLENSLLVDPFKS---LKEADLVVVLVDVS-DKWTRSKLSYEVLKCLALNPDV 226
Query: 341 PVIYVWNKID 350
P + V NK+D
Sbjct: 227 PAVLVLNKVD 236
>UNIPROTKB|Q8EAH6 [details] [associations]
symbol:hydF "Fe hydrogenase maturation GTPase HydF"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR005225
InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525 TIGRFAMs:TIGR00231
EMBL:AE014299 GenomeReviews:AE014299_GR HSSP:P25522
HOGENOM:HOG000287473 OMA:ILPQVQT InterPro:IPR023873
TIGRFAMs:TIGR03918 RefSeq:NP_719457.1 ProteinModelPortal:Q8EAH6
DNASU:1171565 GeneID:1171565 KEGG:son:SO_3926 PATRIC:23527532
ProtClustDB:CLSK2756122 Uniprot:Q8EAH6
Length = 394
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 39/128 (30%), Positives = 59/128 (46%)
Query: 226 NVVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKIT--DTAGIP 283
++ L+G+ N GKSSL N L G ++IV+ I GTT D + K ++ L +T DTAGI
Sbjct: 4 HIALVGRRNSGKSSLLNMLAGQQISIVSDIKGTTTDAVAKAYELQP-LGPVTFYDTAGID 62
Query: 284 DXXXXXXXXXXXXXXXXXXRTWVELKNSDIIIYVQDARYDKHTDFDKKIIKNF-PMNIPV 342
D L SD+ + V D + D +I + +P+
Sbjct: 63 DEGTLGAMRVSATRRV--------LFRSDMALLVVDEQ--GLCPSDMALIDEIRQLQMPI 112
Query: 343 IYVWNKID 350
+ V+NK D
Sbjct: 113 LMVFNKAD 120
>TIGR_CMR|SO_3926 [details] [associations]
symbol:SO_3926 "GTP-binding protein" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0005525 "GTP binding" evidence=ISS]
InterPro:IPR005225 InterPro:IPR006073 Pfam:PF01926 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:AE014299 GenomeReviews:AE014299_GR
HSSP:P25522 HOGENOM:HOG000287473 OMA:ILPQVQT InterPro:IPR023873
TIGRFAMs:TIGR03918 RefSeq:NP_719457.1 ProteinModelPortal:Q8EAH6
DNASU:1171565 GeneID:1171565 KEGG:son:SO_3926 PATRIC:23527532
ProtClustDB:CLSK2756122 Uniprot:Q8EAH6
Length = 394
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 39/128 (30%), Positives = 59/128 (46%)
Query: 226 NVVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKIT--DTAGIP 283
++ L+G+ N GKSSL N L G ++IV+ I GTT D + K ++ L +T DTAGI
Sbjct: 4 HIALVGRRNSGKSSLLNMLAGQQISIVSDIKGTTTDAVAKAYELQP-LGPVTFYDTAGID 62
Query: 284 DXXXXXXXXXXXXXXXXXXRTWVELKNSDIIIYVQDARYDKHTDFDKKIIKNF-PMNIPV 342
D L SD+ + V D + D +I + +P+
Sbjct: 63 DEGTLGAMRVSATRRV--------LFRSDMALLVVDEQ--GLCPSDMALIDEIRQLQMPI 112
Query: 343 IYVWNKID 350
+ V+NK D
Sbjct: 113 LMVFNKAD 120
>UNIPROTKB|Q8EC36 [details] [associations]
symbol:der "GTPase Der" species:211586 "Shewanella
oneidensis MR-1" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00195 InterPro:IPR003593 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 SMART:SM00382 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0042254 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0017111 eggNOG:COG1160 KO:K03977
ProtClustDB:PRK00093 Gene3D:3.30.300.20 InterPro:IPR015946
PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594 OMA:YLENTYR
HOGENOM:HOG000242862 RefSeq:NP_718862.1 ProteinModelPortal:Q8EC36
GeneID:1170993 KEGG:son:SO_3308 PATRIC:23526292 Uniprot:Q8EC36
Length = 487
Score = 120 (47.3 bits), Expect = 0.00034, P = 0.00034
Identities = 36/125 (28%), Positives = 59/125 (47%)
Query: 227 VVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPDXX 286
V L+G+PNVGKS+LFN L + A+V G TRD+ ++ + F + DT GI
Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGIDGTE 64
Query: 287 XXXXXXXXXXXXXXXXRTWVELKNSDIIIYVQDARYDKHTDFDKKIIKNFPMNIPVIYVW 346
++ ++ +D+++++ DAR T D I ++ +V
Sbjct: 65 EGIETKMAE-------QSLAAIEEADVVLFMTDARAGL-TAADLSIAQHLRSRQKTTFVV 116
Query: 347 -NKID 350
NKID
Sbjct: 117 ANKID 121
>TIGR_CMR|SO_3308 [details] [associations]
symbol:SO_3308 "GTP-binding protein EngA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0005525 "GTP binding" evidence=ISS] HAMAP:MF_00195
InterPro:IPR003593 InterPro:IPR005225 InterPro:IPR006073
InterPro:IPR016484 Pfam:PF01926 PIRSF:PIRSF006485 PRINTS:PR00326
SMART:SM00382 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042254
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0017111
eggNOG:COG1160 KO:K03977 ProtClustDB:PRK00093 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
OMA:YLENTYR HOGENOM:HOG000242862 RefSeq:NP_718862.1
ProteinModelPortal:Q8EC36 GeneID:1170993 KEGG:son:SO_3308
PATRIC:23526292 Uniprot:Q8EC36
Length = 487
Score = 120 (47.3 bits), Expect = 0.00034, P = 0.00034
Identities = 36/125 (28%), Positives = 59/125 (47%)
Query: 227 VVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPDXX 286
V L+G+PNVGKS+LFN L + A+V G TRD+ ++ + F + DT GI
Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYEFIVVDTGGIDGTE 64
Query: 287 XXXXXXXXXXXXXXXXRTWVELKNSDIIIYVQDARYDKHTDFDKKIIKNFPMNIPVIYVW 346
++ ++ +D+++++ DAR T D I ++ +V
Sbjct: 65 EGIETKMAE-------QSLAAIEEADVVLFMTDARAGL-TAADLSIAQHLRSRQKTTFVV 116
Query: 347 -NKID 350
NKID
Sbjct: 117 ANKID 121
>UNIPROTKB|P0A6P5 [details] [associations]
symbol:der "50S ribosomal subunit stability factor"
species:83333 "Escherichia coli K-12" [GO:0005829 "cytosol"
evidence=IDA] [GO:0006184 "GTP catabolic process" evidence=IDA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0032794 "GTPase
activating protein binding" evidence=IPI] [GO:0043022 "ribosome
binding" evidence=IDA] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000027 "ribosomal large subunit
assembly" evidence=IMP] HAMAP:MF_00195 InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR016484 Pfam:PF01926
PIRSF:PIRSF006485 PRINTS:PR00326 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003924 GO:GO:0043022 GO:GO:0000027
eggNOG:COG1160 KO:K03977 ProtClustDB:PRK00093 Gene3D:3.30.300.20
InterPro:IPR015946 PANTHER:PTHR11649:SF5 TIGRFAMs:TIGR03594
OMA:YLENTYR HOGENOM:HOG000242862 PIR:F65027 RefSeq:NP_417006.2
RefSeq:YP_490739.1 ProteinModelPortal:P0A6P5 SMR:P0A6P5
DIP:DIP-48272N IntAct:P0A6P5 PaxDb:P0A6P5 PRIDE:P0A6P5
EnsemblBacteria:EBESCT00000000698 EnsemblBacteria:EBESCT00000017218
GeneID:12934159 GeneID:946983 KEGG:ecj:Y75_p2464 KEGG:eco:b2511
PATRIC:32120415 EchoBASE:EB3959 EcoGene:EG14207
BioCyc:EcoCyc:G7319-MONOMER BioCyc:ECOL316407:JW5403-MONOMER
BioCyc:MetaCyc:G7319-MONOMER Genevestigator:P0A6P5 Uniprot:P0A6P5
Length = 490
Score = 120 (47.3 bits), Expect = 0.00034, P = 0.00034
Identities = 34/128 (26%), Positives = 67/128 (52%)
Query: 225 LNVVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPD 284
+ + ++G+PNVGKS+L N ++G + +V + GTTRD I ++ + + + DTAG+
Sbjct: 203 IKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGV-- 260
Query: 285 XXXXXXXXXXXXXXXXXXRTWVELKNSDIIIYVQDARYDKHTDFDKKIIKNFPMNI--PV 342
+T ++++++++ V DAR + +D D ++ F +N +
Sbjct: 261 --RKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAR-EGISDQDLSLL-GFILNSGRSL 316
Query: 343 IYVWNKID 350
+ V NK D
Sbjct: 317 VIVVNKWD 324
Score = 117 (46.2 bits), Expect = 0.00074, P = 0.00074
Identities = 37/125 (29%), Positives = 57/125 (45%)
Query: 227 VVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPDXX 286
V L+G+PNVGKS+LFN L + A+V G TRD+ +I F DT GI
Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGIDGTE 64
Query: 287 XXXXXXXXXXXXXXXXRTWVELKNSDIIIYVQDARYDKHTDFDKKIIKNF-PMNIPVIYV 345
++ + ++ +D+++++ DAR D+ I K+ P V
Sbjct: 65 DGVETRMAE-------QSLLAIEEADVVLFMVDARAGL-MPADEAIAKHLRSREKPTFLV 116
Query: 346 WNKID 350
NK D
Sbjct: 117 ANKTD 121
>UNIPROTKB|F1P349 [details] [associations]
symbol:ERAL1 "GTPase Era, mitochondrial" species:9031
"Gallus gallus" [GO:0005525 "GTP binding" evidence=IEA] [GO:0000028
"ribosomal small subunit assembly" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0043024 "ribosomal small subunit binding"
evidence=IEA] HAMAP:MF_00367 InterPro:IPR004044 InterPro:IPR005225
InterPro:IPR005662 InterPro:IPR006073 Pfam:PF01926 Pfam:PF07650
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005759 GO:GO:0019843
GO:GO:0000028 GO:GO:0043024 Gene3D:3.30.300.20 InterPro:IPR015946
GeneTree:ENSGT00390000013800 IPI:IPI00600649 OMA:TTTRNIS
EMBL:AADN02025859 Ensembl:ENSGALT00000006365 Uniprot:F1P349
Length = 458
Score = 118 (46.6 bits), Expect = 0.00052, P = 0.00052
Identities = 36/130 (27%), Positives = 57/130 (43%)
Query: 225 LNVVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPD 284
L + +IG PN GKS+L N L+G V V+ TTR K I I DT G+
Sbjct: 88 LRIAIIGAPNAGKSTLSNQLLGRKVFPVSKKVHTTRCKARGVITHEDTQLIILDTPGLTS 147
Query: 285 XXXXXXXXXXXXXXXXXXRTWVELKNSDIIIYVQD-ARYDKHTDFDKKIIK---NFPMNI 340
W +K++D+++ + D + + +++K FP +I
Sbjct: 148 PMKAKRHKLEAAMLTD---PWDSMKHADLVLVLVDVSEHWTRNSLSLEVLKCLSQFP-HI 203
Query: 341 PVIYVWNKID 350
P + V NK+D
Sbjct: 204 PSVLVLNKVD 213
>DICTYBASE|DDB_G0288609 [details] [associations]
symbol:eral1 "GTP-binding protein era homolog"
species:44689 "Dictyostelium discoideum" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR005225
InterPro:IPR006073 InterPro:IPR009019 Pfam:PF01926 PRINTS:PR00326
dictyBase:DDB_G0288609 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0003723 Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
eggNOG:COG1159 KO:K03595 EMBL:AAFI02000118 RefSeq:XP_636640.1
ProteinModelPortal:Q54IP6 STRING:Q54IP6 EnsemblProtists:DDB0219361
GeneID:8626714 KEGG:ddi:DDB_G0288609 InParanoid:Q54IP6 OMA:DAVKRPT
Uniprot:Q54IP6
Length = 398
Score = 117 (46.2 bits), Expect = 0.00053, P = 0.00053
Identities = 32/103 (31%), Positives = 45/103 (43%)
Query: 225 LNVVLIGQPNVGKSSLFNSLVGSDVAIVTSIAGTTRDKITKTIQINKFLFKITDTAGIPD 284
LNV +IG PN GKS+L NS+VG + V+ TTRD + + DT GI
Sbjct: 115 LNVAIIGAPNAGKSTLVNSIVGEKICAVSPTEHTTRDAVLGIYSKDDTQILFHDTPGI-- 172
Query: 285 XXXXXXXXXXXXXXXXXXRTWVELKNSDIIIYVQDARYDKHTD 327
W +K +DI++ V DA + +D
Sbjct: 173 ---IKNFNRMAHVREFVNLAWGVVKEADIVLLVVDATNNNSSD 212
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.138 0.396 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 472 411 0.00080 118 3 11 22 0.38 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 66
No. of states in DFA: 607 (65 KB)
Total size of DFA: 242 KB (2132 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.33u 0.08s 30.41t Elapsed: 00:00:12
Total cpu time: 30.34u 0.08s 30.42t Elapsed: 00:00:12
Start: Thu Aug 15 13:11:33 2013 End: Thu Aug 15 13:11:45 2013