Query psy941
Match_columns 487
No_of_seqs 293 out of 2266
Neff 6.5
Searched_HMMs 46136
Date Fri Aug 16 18:27:53 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy941.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/941hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF13532 2OG-FeII_Oxy_2: 2OG-F 100.0 1.3E-30 2.9E-35 246.8 12.0 163 132-296 1-194 (194)
2 PRK15401 alpha-ketoglutarate-d 100.0 1.2E-29 2.7E-34 243.3 16.7 169 127-298 14-213 (213)
3 PF13532 2OG-FeII_Oxy_2: 2OG-F 99.9 3.6E-27 7.8E-32 223.4 11.6 153 328-481 1-177 (194)
4 PRK15401 alpha-ketoglutarate-d 99.9 8.4E-25 1.8E-29 210.0 15.9 156 323-481 14-196 (213)
5 TIGR00568 alkb DNA alkylation 99.9 6.1E-24 1.3E-28 198.1 15.2 142 136-279 1-169 (169)
6 COG3145 AlkB Alkylated DNA rep 99.9 8E-24 1.7E-28 199.6 13.2 162 127-293 11-193 (194)
7 KOG3200|consensus 99.9 5.2E-24 1.1E-28 193.9 11.1 164 129-300 10-216 (224)
8 TIGR00568 alkb DNA alkylation 99.9 4.6E-23 1E-27 192.2 15.0 141 333-475 2-169 (169)
9 KOG3200|consensus 99.9 2E-22 4.4E-27 183.6 10.7 150 325-480 10-179 (224)
10 COG3145 AlkB Alkylated DNA rep 99.9 1.2E-21 2.7E-26 184.8 12.5 158 323-483 11-189 (194)
11 KOG3959|consensus 99.9 1.3E-22 2.9E-27 192.4 2.5 158 130-300 71-279 (306)
12 KOG4176|consensus 99.7 2.5E-18 5.4E-23 174.1 9.2 172 128-315 124-315 (323)
13 KOG3959|consensus 99.7 1.5E-18 3.2E-23 165.0 2.9 146 324-479 69-264 (306)
14 KOG4176|consensus 99.5 7E-14 1.5E-18 141.9 8.2 149 324-477 124-291 (323)
15 KOG2731|consensus 97.6 4.9E-05 1.1E-09 77.6 3.9 78 204-282 216-294 (378)
16 smart00702 P4Hc Prolyl 4-hydro 97.5 0.0034 7.3E-08 58.7 14.8 156 131-293 1-172 (178)
17 KOG2731|consensus 97.5 9.9E-05 2.2E-09 75.4 4.4 96 384-480 200-296 (378)
18 PF03171 2OG-FeII_Oxy: 2OG-Fe( 97.5 8.5E-05 1.8E-09 62.5 3.0 81 205-296 2-95 (98)
19 PRK05467 Fe(II)-dependent oxyg 97.4 0.002 4.4E-08 63.2 12.6 143 133-295 2-174 (226)
20 smart00702 P4Hc Prolyl 4-hydro 97.0 0.015 3.3E-07 54.2 13.6 152 327-480 1-167 (178)
21 PRK05467 Fe(II)-dependent oxyg 96.4 0.042 9.1E-07 54.0 12.0 134 329-478 2-164 (226)
22 PF03171 2OG-FeII_Oxy: 2OG-Fe( 95.8 0.0081 1.8E-07 50.4 3.3 72 401-479 2-85 (98)
23 COG3128 PiuC Uncharacterized i 95.5 0.067 1.4E-06 50.7 8.4 82 208-298 85-179 (229)
24 PLN00052 prolyl 4-hydroxylase; 95.2 0.3 6.5E-06 50.3 13.0 160 128-293 51-245 (310)
25 PF12933 FTO_NTD: FTO catalyti 95.1 0.024 5.2E-07 55.7 4.1 91 203-298 137-251 (253)
26 PF13640 2OG-FeII_Oxy_3: 2OG-F 94.5 0.007 1.5E-07 50.9 -0.9 80 207-293 1-94 (100)
27 PLN00052 prolyl 4-hydroxylase; 94.2 0.26 5.6E-06 50.8 9.3 96 324-420 51-151 (310)
28 PF12933 FTO_NTD: FTO catalyti 90.2 0.43 9.3E-06 47.1 4.8 84 399-482 137-243 (253)
29 PF13640 2OG-FeII_Oxy_3: 2OG-F 90.1 0.089 1.9E-06 44.1 0.1 73 403-478 1-86 (100)
30 PF09859 Oxygenase-NA: Oxygena 89.9 1.1 2.3E-05 41.9 6.8 95 180-282 42-158 (173)
31 TIGR01762 chlorin-enz chlorina 89.4 4.4 9.6E-05 41.2 11.7 41 254-300 208-249 (288)
32 COG3128 PiuC Uncharacterized i 89.0 2.1 4.6E-05 40.8 8.2 70 404-478 85-167 (229)
33 KOG1591|consensus 85.6 4.5 9.7E-05 41.3 9.0 133 127-267 93-250 (289)
34 KOG1591|consensus 80.4 7.7 0.00017 39.6 8.3 134 322-463 92-250 (289)
35 PF09859 Oxygenase-NA: Oxygena 78.9 5.4 0.00012 37.3 6.1 99 375-478 41-158 (173)
36 TIGR01762 chlorin-enz chlorina 63.3 27 0.00059 35.5 7.7 27 326-352 13-39 (288)
37 PF12851 Tet_JBP: Oxygenase do 46.8 52 0.0011 30.8 6.1 86 204-295 76-167 (171)
38 PF08007 Cupin_4: Cupin superf 45.2 31 0.00067 35.6 4.7 58 206-268 113-189 (319)
39 TIGR02408 ectoine_ThpD ectoine 42.1 95 0.0021 31.2 7.6 28 326-353 27-54 (277)
40 KOG0143|consensus 41.8 74 0.0016 32.9 6.9 68 206-280 177-251 (322)
41 PF08007 Cupin_4: Cupin superf 37.5 45 0.00098 34.3 4.5 58 402-464 113-189 (319)
42 TIGR02408 ectoine_ThpD ectoine 36.1 1.3E+02 0.0029 30.1 7.6 28 130-157 27-54 (277)
43 PLN03001 oxidoreductase, 2OG-F 32.9 86 0.0019 31.4 5.6 68 206-281 117-190 (262)
44 PLN02904 oxidoreductase 32.0 1E+02 0.0022 32.4 6.1 75 402-484 209-289 (357)
45 PLN02904 oxidoreductase 31.6 98 0.0021 32.5 5.9 68 206-281 209-282 (357)
46 PLN02156 gibberellin 2-beta-di 31.0 1.2E+02 0.0026 31.6 6.4 78 401-485 178-263 (335)
47 PLN02750 oxidoreductase, 2OG-F 30.7 1.3E+02 0.0027 31.4 6.5 79 401-485 193-277 (345)
48 PLN02947 oxidoreductase 29.2 1.4E+02 0.003 31.7 6.6 69 205-281 225-299 (374)
49 PLN03001 oxidoreductase, 2OG-F 28.6 1.1E+02 0.0024 30.7 5.5 75 402-484 117-197 (262)
50 PTZ00273 oxidase reductase; Pr 27.1 1.1E+02 0.0024 31.4 5.3 77 402-485 178-261 (320)
51 PLN02912 oxidoreductase, 2OG-F 27.1 1.3E+02 0.0028 31.4 5.9 66 205-281 197-271 (348)
52 COG3826 Uncharacterized protei 26.4 2.3E+02 0.005 27.2 6.7 81 180-268 104-196 (236)
53 PLN02515 naringenin,2-oxogluta 25.9 1.7E+02 0.0038 30.7 6.6 71 205-281 195-271 (358)
54 PLN02515 naringenin,2-oxogluta 24.7 1.7E+02 0.0037 30.7 6.3 77 402-484 196-278 (358)
55 PLN02156 gibberellin 2-beta-di 24.2 2.3E+02 0.005 29.5 7.1 68 205-282 178-256 (335)
56 PLN02997 flavonol synthase 24.2 1.6E+02 0.0034 30.5 5.8 78 206-295 184-276 (325)
57 PLN02947 oxidoreductase 23.6 2E+02 0.0042 30.5 6.5 75 402-484 226-306 (374)
58 COG5285 Protein involved in bi 23.4 1E+02 0.0022 31.6 4.1 78 216-300 131-232 (299)
59 PLN02912 oxidoreductase, 2OG-F 22.5 1.6E+02 0.0035 30.7 5.6 76 401-484 197-278 (348)
60 PLN02216 protein SRG1 22.2 2.1E+02 0.0045 30.0 6.3 78 206-295 211-304 (357)
61 PLN02299 1-aminocyclopropane-1 22.1 1.6E+02 0.0035 30.3 5.4 82 206-295 159-252 (321)
62 PLN02254 gibberellin 3-beta-di 22.0 2E+02 0.0043 30.3 6.1 77 401-484 210-292 (358)
63 PLN02704 flavonol synthase 21.9 1.3E+02 0.0028 31.2 4.7 74 403-484 201-280 (335)
64 PLN02704 flavonol synthase 21.3 1.5E+02 0.0032 30.7 5.0 68 206-281 200-273 (335)
65 PLN03002 oxidoreductase, 2OG-F 21.1 1.7E+02 0.0037 30.3 5.4 77 209-295 186-280 (332)
66 PLN02984 oxidoreductase, 2OG-F 20.6 2.5E+02 0.0053 29.3 6.5 82 206-295 201-294 (341)
67 PLN02750 oxidoreductase, 2OG-F 20.5 3E+02 0.0065 28.6 7.1 71 205-281 193-269 (345)
68 PLN00417 oxidoreductase, 2OG-F 20.4 2E+02 0.0043 30.1 5.7 79 209-295 207-297 (348)
69 PLN02365 2-oxoglutarate-depend 20.4 2.2E+02 0.0048 29.0 6.0 76 402-484 150-233 (300)
70 KOG0143|consensus 20.3 2.5E+02 0.0055 29.0 6.4 74 402-482 177-257 (322)
No 1
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A ....
Probab=99.97 E-value=1.3e-30 Score=246.83 Aligned_cols=163 Identities=26% Similarity=0.336 Sum_probs=115.7
Q ss_pred CeEEEcCCCCHHHHHHHHHHHHHHhh--cc------c-------cccCCCC-----cCCCC---cccccCCCCchhhHHH
Q psy941 132 NMLVINDFLSAEEEQSLLKEINQFIK--RQ------R-------YEYDHWD-----DAIHG---FRETERSKWNEENTKI 188 (487)
Q Consensus 132 Gl~~ipdfls~~Ee~~Ll~~i~~~l~--rr------r-------y~~~~w~-----~~i~g---~r~~~~~~w~~~~~~i 188 (487)
|++|++||||++|+++|+++|.+... +. . +....|. +.+++ ++..+.++|++.+..+
T Consensus 1 G~~~~~~fls~~e~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~y~~~~~~~~~~~~~~p~~l~~~ 80 (194)
T PF13532_consen 1 GLYYIPNFLSEEEAAELLNELRESAPFRQPTYPMGKVYSLPRKLCGGLSWVGDGPSYRYSGKRPVRSKPWPPFPEWLSRL 80 (194)
T ss_dssp -EEEETTSS-HHHHHHHHHHHHHHS--B-GCCCCCCECCECCE-SSEEEEEECT--CCCTCC-EECCCEBSCCHHHHHHH
T ss_pred CEEEECCCCCHHHHHHHHHHHHhhCCCcCCeEcCCCEEccceecceeeEEECCCCCeEcCCccccCCCCCCCccHHHHHH
Confidence 89999999999999999999996311 11 0 1001121 11222 2233467888888888
Q ss_pred HHHHHhhcC-CCCCCCCCeEEEeecCCCCCCcCCCCCCCc-cCCeEEEEecCCCeEEEEEecCCCCeEEEEEecCCcEEe
Q psy941 189 IARVQNLAF-PPNVTPIQYVHVLDLEQKGYIKAHVDSVRF-CGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYV 266 (487)
Q Consensus 189 ~~rl~~~~~-~~~~~~~d~~lVN~Y~pg~gI~~H~D~~~~-~g~~IaslSLGs~~vm~F~~~~~~~~~~~v~L~~gSLlV 266 (487)
++++.+... ..+ ..||+|+||+|.+|++|++|+|+++. +|++||+||||++|+|.|++....+..+.|.|++|||||
T Consensus 81 ~~~~~~~~~~~~~-~~~n~~liN~Y~~g~~i~~H~D~~~~~~~~~I~slSLG~~~~~~f~~~~~~~~~~~~~L~~gsl~v 159 (194)
T PF13532_consen 81 LERLVEATGIPPG-WRPNQCLINYYRDGSGIGPHSDDEEYGFGPPIASLSLGSSRVFRFRNKSDDDEPIEVPLPPGSLLV 159 (194)
T ss_dssp HHHHHHHHT-SHS-S--SEEEEEEESSTT-EEEE---TTC-CCSEEEEEEEES-EEEEEEECGGTS-EEEEEE-TTEEEE
T ss_pred HHHHHHHhccccC-CCCCEEEEEecCCCCCcCCCCCcccccCCCcEEEEEEccCceEEEeeccCCCccEEEEcCCCCEEE
Confidence 888876432 222 25899999999999999999999977 899999999999999999998766789999999999999
Q ss_pred ecccccccccccccccccCC-----CCCcccc-cCc
Q psy941 267 MKDDARYKFTHEVLENEKSY-----FGDLRFK-TFP 296 (487)
Q Consensus 267 m~G~aRy~w~H~Ip~~~~d~-----~~g~RIs-TfR 296 (487)
|+|++|+.| |+|++.+.+. .++.||| |||
T Consensus 160 m~g~~r~~~-H~I~~~~~~~~~~~~~~~~RislTfR 194 (194)
T PF13532_consen 160 MSGEARYDW-HGIPPVKKDTHPSHYVRGRRISLTFR 194 (194)
T ss_dssp EETTHHHHE-EEE-S-SCEEEESTEE-S-EEEEEEE
T ss_pred eChHHhhhe-eEcccccCCccccccCCCCEEEEEeC
Confidence 999999999 9999987643 5779999 998
No 2
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional
Probab=99.97 E-value=1.2e-29 Score=243.27 Aligned_cols=169 Identities=17% Similarity=0.245 Sum_probs=131.2
Q ss_pred cccCCCeEEEcCCCCHHHHHHHHHHHHHH-----hhccc-----------cccC--CCCcCCCCccccc-----CCCCch
Q psy941 127 SSILSNMLVINDFLSAEEEQSLLKEINQF-----IKRQR-----------YEYD--HWDDAIHGFRETE-----RSKWNE 183 (487)
Q Consensus 127 ~~~~~Gl~~ipdfls~~Ee~~Ll~~i~~~-----l~rrr-----------y~~~--~w~~~i~g~r~~~-----~~~w~~ 183 (487)
..+.+|+.++++| ..+++++|+++|.++ +++.+ -..+ .|..+..|||... ..+|++
T Consensus 14 ~~~~~g~~~~~~~-~~~~~~~l~~~~~~~~~~~p~~~~~~~gg~~msv~mt~~G~~~W~~d~~~YrYs~~~~~~~~pwp~ 92 (213)
T PRK15401 14 EPLAPGAVLLRGF-ALAAAEALLAAIEAVAAQAPFRHMVTPGGYTMSVAMTNCGALGWVTDRRGYRYSPIDPLTGKPWPA 92 (213)
T ss_pred eecCCCcEEeCCC-CHHHHHHHHHHHHHHHhcCCccceecCCCCcceeEEeccccceEecCCCCcccCCcCCCCCCCCCC
Confidence 3578999999999 599999999999984 22221 1122 5644334665542 356776
Q ss_pred ---hhHHHHHHHHhhcCCCCCCCCCeEEEeecCCCCCCcCCCCC-CCccCCeEEEEecCCCeEEEEEecCCCCeEEEEEe
Q psy941 184 ---ENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKAHVDS-VRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLL 259 (487)
Q Consensus 184 ---~~~~i~~rl~~~~~~~~~~~~d~~lVN~Y~pg~gI~~H~D~-~~~~g~~IaslSLGs~~vm~F~~~~~~~~~~~v~L 259 (487)
.+..+.+++.+.+-..++ .||+||||+|++|++|+||+|+ +..++++|||||||++|+|.|++.+..+++.+|.|
T Consensus 93 ~P~~l~~L~~~~~~~~~~~~~-~p~a~LvN~Y~~G~~mg~H~D~~E~~~~~pI~SvSLG~~~~F~~~~~~~~~~~~~l~L 171 (213)
T PRK15401 93 MPASFLALAQRAAAAAGFPGF-QPDACLINRYAPGAKLSLHQDKDERDFRAPIVSVSLGLPAVFQFGGLKRSDPLQRILL 171 (213)
T ss_pred chHHHHHHHHHHHHHcCCCCC-CCCEEEEEeccCcCccccccCCCcccCCCCEEEEeCCCCeEEEecccCCCCceEEEEe
Confidence 677888887654322233 4899999999999999999996 55688999999999999999998765667899999
Q ss_pred cCCcEEeecccccccccccccccccCC---CCCcccc-cCccc
Q psy941 260 KQRSLYVMKDDARYKFTHEVLENEKSY---FGDLRFK-TFPLI 298 (487)
Q Consensus 260 ~~gSLlVm~G~aRy~w~H~Ip~~~~d~---~~g~RIs-TfR~~ 298 (487)
++|||+||+|++|+.| |+|++.+... .+++||| |||++
T Consensus 172 ~~Gdllvm~G~sr~~~-HgVp~~~~~~~p~~g~~RINLTFR~~ 213 (213)
T PRK15401 172 EHGDVVVWGGPSRLRY-HGILPLKAGEHPLTGECRINLTFRKA 213 (213)
T ss_pred CCCCEEEECchHhhee-ccCCcCCCCcCCCCCCCeEEEEeEcC
Confidence 9999999999999966 9999987532 3458999 99975
No 3
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A ....
Probab=99.94 E-value=3.6e-27 Score=223.36 Aligned_cols=153 Identities=24% Similarity=0.261 Sum_probs=108.4
Q ss_pred ceeecCCCCCHHHHHHHHHHHHHHhhcc--------c-------ccccCCCcCCC--------CccccccCchhhhHHHH
Q psy941 328 NMLVINDFLSAEEEQSLLKEINQFIKRQ--------R-------YEYDHWDDAIH--------GFRETERSKWNEENTKI 384 (487)
Q Consensus 328 Gl~~~pdfis~~Ee~~Ll~~l~~~l~rr--------r-------y~~~~w~~~~~--------~y~~~~~~pwp~~l~~l 384 (487)
|++|++||||++|+++|+++|.+..... . +....|..... .+.....++||+.+..+
T Consensus 1 G~~~~~~fls~~e~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~y~~~~~~~~~~~~~~p~~l~~~ 80 (194)
T PF13532_consen 1 GLYYIPNFLSEEEAAELLNELRESAPFRQPTYPMGKVYSLPRKLCGGLSWVGDGPSYRYSGKRPVRSKPWPPFPEWLSRL 80 (194)
T ss_dssp -EEEETTSS-HHHHHHHHHHHHHHS--B-GCCCCCCECCECCE-SSEEEEEECT--CCCTCC-EECCCEBSCCHHHHHHH
T ss_pred CEEEECCCCCHHHHHHHHHHHHhhCCCcCCeEcCCCEEccceecceeeEEECCCCCeEcCCccccCCCCCCCccHHHHHH
Confidence 8999999999999999999999752211 0 00112222111 12234567888888889
Q ss_pred HHHHHhhcCCCCCCCCCeEEEeccCCCCCcccCCCCCcc-cCCceEEEecCCceEEEEEecCCCCeEEEEEeCCCcEEEe
Q psy941 385 IARVQNLAFPPNVTPIQYVHVLDLEQKGYIKAHVDSVRF-CGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVM 463 (487)
Q Consensus 385 l~rl~~~~~~~~~~~~n~~liN~Y~pG~gI~~H~D~~~~-~g~~IaslSLGs~~vm~F~~~~~~~~~~~v~L~~rSLlvm 463 (487)
++++.+.........||+|+||+|.+|++|+||+|+++. +|++||+||||++|+|.|++....+..+.+.|++||||||
T Consensus 81 ~~~~~~~~~~~~~~~~n~~liN~Y~~g~~i~~H~D~~~~~~~~~I~slSLG~~~~~~f~~~~~~~~~~~~~L~~gsl~vm 160 (194)
T PF13532_consen 81 LERLVEATGIPPGWRPNQCLINYYRDGSGIGPHSDDEEYGFGPPIASLSLGSSRVFRFRNKSDDDEPIEVPLPPGSLLVM 160 (194)
T ss_dssp HHHHHHHHT-SHSS--SEEEEEEESSTT-EEEE---TTC-CCSEEEEEEEES-EEEEEEECGGTS-EEEEEE-TTEEEEE
T ss_pred HHHHHHHhccccCCCCCEEEEEecCCCCCcCCCCCcccccCCCcEEEEEEccCceEEEeeccCCCccEEEEcCCCCEEEe
Confidence 998876542111136899999999999999999999876 8999999999999999999886667899999999999999
Q ss_pred ccccccccccccccCCcc
Q psy941 464 KDDARYKFTHEVLENESL 481 (487)
Q Consensus 464 sG~aRy~w~HgI~~~~~~ 481 (487)
+|++|+.| |+|++.+..
T Consensus 161 ~g~~r~~~-H~I~~~~~~ 177 (194)
T PF13532_consen 161 SGEARYDW-HGIPPVKKD 177 (194)
T ss_dssp ETTHHHHE-EEE-S-SCE
T ss_pred ChHHhhhe-eEcccccCC
Confidence 99999999 999999874
No 4
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional
Probab=99.92 E-value=8.4e-25 Score=210.00 Aligned_cols=156 Identities=16% Similarity=0.203 Sum_probs=120.0
Q ss_pred cccccceeecCCCCCHHHHHHHHHHHHHHh-----hcc----c------c---cccCCCcCCCCcccc-----ccCchhh
Q psy941 323 SSILSNMLVINDFLSAEEEQSLLKEINQFI-----KRQ----R------Y---EYDHWDDAIHGFRET-----ERSKWNE 379 (487)
Q Consensus 323 ~~~~~Gl~~~pdfis~~Ee~~Ll~~l~~~l-----~rr----r------y---~~~~w~~~~~~y~~~-----~~~pwp~ 379 (487)
..+.+|+.++++|. .++++.|++.|.+.+ .+. | . +..+|.....+|+.. ...+||+
T Consensus 14 ~~~~~g~~~~~~~~-~~~~~~l~~~~~~~~~~~p~~~~~~~gg~~msv~mt~~G~~~W~~d~~~YrYs~~~~~~~~pwp~ 92 (213)
T PRK15401 14 EPLAPGAVLLRGFA-LAAAEALLAAIEAVAAQAPFRHMVTPGGYTMSVAMTNCGALGWVTDRRGYRYSPIDPLTGKPWPA 92 (213)
T ss_pred eecCCCcEEeCCCC-HHHHHHHHHHHHHHHhcCCccceecCCCCcceeEEeccccceEecCCCCcccCCcCCCCCCCCCC
Confidence 56788999999995 999999999999842 111 1 1 112564322344432 2356766
Q ss_pred ---hHHHHHHHHHhhcCCCCCCCCCeEEEeccCCCCCcccCCCC-CcccCCceEEEecCCceEEEEEecCCCCeEEEEEe
Q psy941 380 ---ENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKAHVDS-VRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLL 455 (487)
Q Consensus 380 ---~l~~ll~rl~~~~~~~~~~~~n~~liN~Y~pG~gI~~H~D~-~~~~g~~IaslSLGs~~vm~F~~~~~~~~~~~v~L 455 (487)
.+.+|.+++.......+ ..||+||||+|++|++|+||+|+ +..++++|||||||++|+|.|++.+..+.+.+|.|
T Consensus 93 ~P~~l~~L~~~~~~~~~~~~-~~p~a~LvN~Y~~G~~mg~H~D~~E~~~~~pI~SvSLG~~~~F~~~~~~~~~~~~~l~L 171 (213)
T PRK15401 93 MPASFLALAQRAAAAAGFPG-FQPDACLINRYAPGAKLSLHQDKDERDFRAPIVSVSLGLPAVFQFGGLKRSDPLQRILL 171 (213)
T ss_pred chHHHHHHHHHHHHHcCCCC-CCCCEEEEEeccCcCccccccCCCcccCCCCEEEEeCCCCeEEEecccCCCCceEEEEe
Confidence 67778888765543222 25899999999999999999996 55688999999999999999998765566889999
Q ss_pred CCCcEEEeccccccccccccccCCcc
Q psy941 456 KQRSLYVMKDDARYKFTHEVLENESL 481 (487)
Q Consensus 456 ~~rSLlvmsG~aRy~w~HgI~~~~~~ 481 (487)
++|||+||+|++|+.| |+|++.+..
T Consensus 172 ~~Gdllvm~G~sr~~~-HgVp~~~~~ 196 (213)
T PRK15401 172 EHGDVVVWGGPSRLRY-HGILPLKAG 196 (213)
T ss_pred CCCCEEEECchHhhee-ccCCcCCCC
Confidence 9999999999999966 999998764
No 5
>TIGR00568 alkb DNA alkylation damage repair protein AlkB. Proteins in this family have an as of yet undetermined function in the repair of alkylation damage to DNA. Alignment and family designation based on phylogenomic analysis of Jonathan A. Eisen (PhD Thesis, Stanford University, 1999).
Probab=99.91 E-value=6.1e-24 Score=198.12 Aligned_cols=142 Identities=14% Similarity=0.162 Sum_probs=106.3
Q ss_pred EcCCCCHHHHHHHHHHHHHHh-----h-------------ccccccCCC-----CcCCCCcc---cccCCCCchhhHHHH
Q psy941 136 INDFLSAEEEQSLLKEINQFI-----K-------------RQRYEYDHW-----DDAIHGFR---ETERSKWNEENTKII 189 (487)
Q Consensus 136 ipdfls~~Ee~~Ll~~i~~~l-----~-------------rrry~~~~w-----~~~i~g~r---~~~~~~w~~~~~~i~ 189 (487)
+.+|+..+++..|+++|.+.. + |....--.| .+.+++.. ..+.++||+.+..|.
T Consensus 1 l~~~~~~~~~~~l~~~~~~~~~~~~w~~~~~~~gk~~~~pr~~~~~l~W~~~g~~Y~ys~~~~~~~~~~p~~P~~L~~L~ 80 (169)
T TIGR00568 1 LKRYFAFNAQEQLIRDINDVASQDPFRQYVTPGGYTMSVAMTNLGKLGWTTHGQGYLYSPKDPQTNKPWPAMPQDLGDLC 80 (169)
T ss_pred CCCccChHHHHHHHHHHHHHhhcCCCcCeEecCCeEeeehhhhcccceEEcCCCcccCCCcccCCCCCCCCCCHHHHHHH
Confidence 357899999999999998631 1 111100113 22223321 123355889999999
Q ss_pred HHHHhhcCCCCCCCCCeEEEeecCCCCCCcCCCCCCC-ccCCeEEEEecCCCeEEEEEecCCCCeEEEEEecCCcEEeec
Q psy941 190 ARVQNLAFPPNVTPIQYVHVLDLEQKGYIKAHVDSVR-FCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMK 268 (487)
Q Consensus 190 ~rl~~~~~~~~~~~~d~~lVN~Y~pg~gI~~H~D~~~-~~g~~IaslSLGs~~vm~F~~~~~~~~~~~v~L~~gSLlVm~ 268 (487)
+++.+..-..+ ..||+||||+|++|++|+||+|..+ .++++|||||||++|+|.|++++..+.+.+|.|++||||||+
T Consensus 81 ~~v~~~~g~~~-~~~n~~LvN~Y~~Gd~mg~H~D~~e~~~~~pI~SvSLG~~r~F~~~~~~~~~~~~~l~L~sGsllvM~ 159 (169)
T TIGR00568 81 ERVATAAGFPD-FQPDACLVNRYAPGATLSLHQDRDEPDLRAPLLSVSLGLPAIFLIGGLKRNDPPKRLRLHSGDVVIMG 159 (169)
T ss_pred HHHHHHhCCCC-CCCCEEEEEeecCCCccccccccccccCCCCEEEEeCCCCEEEEecCCcCCCceEEEEeCCCCEEEEC
Confidence 99876432222 2589999999999999999999633 356899999999999999999876666899999999999999
Q ss_pred ccccccccccc
Q psy941 269 DDARYKFTHEV 279 (487)
Q Consensus 269 G~aRy~w~H~I 279 (487)
|++|+.| |||
T Consensus 160 G~sR~~~-Hgv 169 (169)
T TIGR00568 160 GESRLAF-HGV 169 (169)
T ss_pred Cchhccc-cCC
Confidence 9999999 997
No 6
>COG3145 AlkB Alkylated DNA repair protein [DNA replication, recombination, and repair]
Probab=99.91 E-value=8e-24 Score=199.61 Aligned_cols=162 Identities=16% Similarity=0.233 Sum_probs=119.6
Q ss_pred cccCCCeEEEcCCCCHHHHHHHHHHHHHH------hhcccccc---------CCCCcCCCCccccc-----CCCCchhhH
Q psy941 127 SSILSNMLVINDFLSAEEEQSLLKEINQF------IKRQRYEY---------DHWDDAIHGFRETE-----RSKWNEENT 186 (487)
Q Consensus 127 ~~~~~Gl~~ipdfls~~Ee~~Ll~~i~~~------l~rrry~~---------~~w~~~i~g~r~~~-----~~~w~~~~~ 186 (487)
..+.+|+.+.++|+ -.++.++++.+..- ...+++-| -.|...+.||++.. .++||+ +.
T Consensus 11 ~~~~~G~~~~~~~~-~~~~~~l~~~l~~~~~~~P~~~~~~~~~g~~~sV~r~~~W~~d~~gy~y~~~~p~~~~p~p~-l~ 88 (194)
T COG3145 11 RQLAPGAVILPGFL-LLTQGALVAALLFLLSQAPWFRPRRTPYGKPMSVPRLLGWVTDRRGYRYSLRSPLTGKPWPP-LL 88 (194)
T ss_pred ccCCCCeEEEeccc-ccchHHHHHHHHHhcccCcccceeecCCCcEeeeeeccceecccccccccccccCCCCCCCc-cH
Confidence 36789999999999 66777777777642 22221111 24555556776543 356744 34
Q ss_pred HHHHHHHhhcCCCCCCCCCeEEEeecCCCCCCcCCCCCCCccCC-eEEEEecCCCeEEEEEecCCCCeEEEEEecCCcEE
Q psy941 187 KIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKAHVDSVRFCGN-TIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLY 265 (487)
Q Consensus 187 ~i~~rl~~~~~~~~~~~~d~~lVN~Y~pg~gI~~H~D~~~~~g~-~IaslSLGs~~vm~F~~~~~~~~~~~v~L~~gSLl 265 (487)
.++..+...+ +..+..+++||||+|+||++|+||+|.++..+. +|||||||++|+|.|++....++..++.|++||++
T Consensus 89 ~~~~~~~~~~-g~~~~~~ea~Lvn~Y~pGd~ig~HqD~~e~~~~~~v~slSLg~~~~F~~~~~~r~~~~~~~~L~~Gdvv 167 (194)
T COG3145 89 ALFHDLFGAA-GYPFEGPEAVLVNRYRPGASIGWHQDKDEEDDRPPVASLSLGAPCIFRLRGRRRRGPGLRLRLEHGDVV 167 (194)
T ss_pred HHHHHHHHHh-cCCCCChhheeEEeccCCCccccccccccccCCCceEEEecCCCeEEEeccccCCCCceeEEecCCCEE
Confidence 4444433322 222235889999999999999999999775543 89999999999999999986678999999999999
Q ss_pred eecccccccccccccccccCCCCCcccc
Q psy941 266 VMKDDARYKFTHEVLENEKSYFGDLRFK 293 (487)
Q Consensus 266 Vm~G~aRy~w~H~Ip~~~~d~~~g~RIs 293 (487)
||+|++|+.|.|.||++.. ..+.|||
T Consensus 168 vm~G~~r~~~~h~~p~~~~--~~~~Rin 193 (194)
T COG3145 168 VMGGPSRLAWHHIIPKTSR--LTGQRIN 193 (194)
T ss_pred EecCCcccccccccccccc--CCccccc
Confidence 9999999999999999876 3446765
No 7
>KOG3200|consensus
Probab=99.90 E-value=5.2e-24 Score=193.88 Aligned_cols=164 Identities=23% Similarity=0.341 Sum_probs=128.4
Q ss_pred cCCCeEEEcCCCCHHHHHHHHHHHHH-----H--hhccccccCCCCcCCC--CcccccCCCCchhhHHHHHHHHhhcCCC
Q psy941 129 ILSNMLVINDFLSAEEEQSLLKEINQ-----F--IKRQRYEYDHWDDAIH--GFRETERSKWNEENTKIIARVQNLAFPP 199 (487)
Q Consensus 129 ~~~Gl~~ipdfls~~Ee~~Ll~~i~~-----~--l~rrry~~~~w~~~i~--g~r~~~~~~w~~~~~~i~~rl~~~~~~~ 199 (487)
..|-..|||+||+++||..+++.|+. | |..||. ..|....+ |.-. ..+|++++.+.+++.+..+..
T Consensus 10 ~~pt~~YIPnfIt~EEe~~~lshIe~ap~pkW~~L~NRRL--qNyGGvvh~~glip---eelP~wLq~~v~kinnlglF~ 84 (224)
T KOG3200|consen 10 SAPTMIYIPNFITEEEENLYLSHIENAPQPKWRVLANRRL--QNYGGVVHKTGLIP---EELPPWLQYYVDKINNLGLFK 84 (224)
T ss_pred ccceEEEcCCccChHHHHHHHHHHhcCCCchhHHHHhhhh--hhcCCccccCCcCc---cccCHHHHHHHHHhhcccccC
Confidence 35678999999999999999999985 3 555552 23333322 4433 345555788999998765544
Q ss_pred CCCCCCeEEEeecCCCCCCcCCCCCCCccCCeEEEEecCCCeEEEEEecCC-------------CCeEEEEEecCCcEEe
Q psy941 200 NVTPIQYVHVLDLEQKGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKT-------------KTQEILVLLKQRSLYV 266 (487)
Q Consensus 200 ~~~~~d~~lVN~Y~pg~gI~~H~D~~~~~g~~IaslSLGs~~vm~F~~~~~-------------~~~~~~v~L~~gSLlV 266 (487)
+ ..|+++||+|.||+||+||.|++ .|.++|+++||||.|+|+|..... ....+.+.|+++||||
T Consensus 85 s--~~NHVLVNeY~pgqGImPHtDGP-af~piVstiSlGsh~vldf~~p~r~e~~d~te~~dqp~R~~fsllleprslLi 161 (224)
T KOG3200|consen 85 S--PANHVLVNEYLPGQGIMPHTDGP-AFHPIVSTISLGSHTVLDFYDPVRQEVNDGTESKDQPLRYLFSLLLEPRSLLI 161 (224)
T ss_pred C--CcceeEeecccCCCCcCcCCCCC-cccceEEEEecCCceEEecccccccccCCccccCCCCccceeeeeeccceEEE
Confidence 4 47999999999999999999996 566999999999999999987421 0136889999999999
Q ss_pred ecccccccccccccccccC--------------------CCCCcccc-cCccccc
Q psy941 267 MKDDARYKFTHEVLENEKS--------------------YFGDLRFK-TFPLIHS 300 (487)
Q Consensus 267 m~G~aRy~w~H~Ip~~~~d--------------------~~~g~RIs-TfR~~~~ 300 (487)
++|+|+.+|.|||.....| .+++.||| |+|.+-+
T Consensus 162 lkd~aYtd~LHgIs~s~~d~l~~~~sna~ac~s~k~Gd~lvr~tRvSLTiR~VPk 216 (224)
T KOG3200|consen 162 LKDDAYTDFLHGISDSPTDCLNQVVSNALACSSRKDGDKLVRQTRVSLTIRLVPK 216 (224)
T ss_pred EcCcHHHHHHhhcccChHHHHHHHhhhhhhccccCCcceeeecceeEEEEecchH
Confidence 9999999999999876432 16789999 9998854
No 8
>TIGR00568 alkb DNA alkylation damage repair protein AlkB. Proteins in this family have an as of yet undetermined function in the repair of alkylation damage to DNA. Alignment and family designation based on phylogenomic analysis of Jonathan A. Eisen (PhD Thesis, Stanford University, 1999).
Probab=99.90 E-value=4.6e-23 Score=192.20 Aligned_cols=141 Identities=14% Similarity=0.152 Sum_probs=106.0
Q ss_pred CCCCCHHHHHHHHHHHHHHh---hcc-------------cccc--cCCCcC--CCCcccc------ccCchhhhHHHHHH
Q psy941 333 NDFLSAEEEQSLLKEINQFI---KRQ-------------RYEY--DHWDDA--IHGFRET------ERSKWNEENTKIIA 386 (487)
Q Consensus 333 pdfis~~Ee~~Ll~~l~~~l---~rr-------------ry~~--~~w~~~--~~~y~~~------~~~pwp~~l~~ll~ 386 (487)
.+|+...++..|++++.... .++ +... ..|... ...|+.. ..++||+.+..|.+
T Consensus 2 ~~~~~~~~~~~l~~~~~~~~~~~~w~~~~~~~gk~~~~pr~~~~~l~W~~~g~~Y~ys~~~~~~~~~~p~~P~~L~~L~~ 81 (169)
T TIGR00568 2 KRYFAFNAQEQLIRDINDVASQDPFRQYVTPGGYTMSVAMTNLGKLGWTTHGQGYLYSPKDPQTNKPWPAMPQDLGDLCE 81 (169)
T ss_pred CCccChHHHHHHHHHHHHHhhcCCCcCeEecCCeEeeehhhhcccceEEcCCCcccCCCcccCCCCCCCCCCHHHHHHHH
Confidence 57899999999999887741 111 0110 124221 1123222 23457899999999
Q ss_pred HHHhhcCCCCCCCCCeEEEeccCCCCCcccCCCCCc-ccCCceEEEecCCceEEEEEecCCCCeEEEEEeCCCcEEEecc
Q psy941 387 RVQNLAFPPNVTPIQYVHVLDLEQKGYIKAHVDSVR-FCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKD 465 (487)
Q Consensus 387 rl~~~~~~~~~~~~n~~liN~Y~pG~gI~~H~D~~~-~~g~~IaslSLGs~~vm~F~~~~~~~~~~~v~L~~rSLlvmsG 465 (487)
++++.+...+ ..||+||||+|++|++|+||+|..+ .++++|||||||++|+|.|++++..+.+.++.|++||||||+|
T Consensus 82 ~v~~~~g~~~-~~~n~~LvN~Y~~Gd~mg~H~D~~e~~~~~pI~SvSLG~~r~F~~~~~~~~~~~~~l~L~sGsllvM~G 160 (169)
T TIGR00568 82 RVATAAGFPD-FQPDACLVNRYAPGATLSLHQDRDEPDLRAPLLSVSLGLPAIFLIGGLKRNDPPKRLRLHSGDVVIMGG 160 (169)
T ss_pred HHHHHhCCCC-CCCCEEEEEeecCCCccccccccccccCCCCEEEEeCCCCEEEEecCCcCCCceEEEEeCCCCEEEECC
Confidence 9987653222 3699999999999999999999633 3558999999999999999988666668999999999999999
Q ss_pred cccccccccc
Q psy941 466 DARYKFTHEV 475 (487)
Q Consensus 466 ~aRy~w~HgI 475 (487)
++|+.| |||
T Consensus 161 ~sR~~~-Hgv 169 (169)
T TIGR00568 161 ESRLAF-HGV 169 (169)
T ss_pred chhccc-cCC
Confidence 999988 997
No 9
>KOG3200|consensus
Probab=99.88 E-value=2e-22 Score=183.56 Aligned_cols=150 Identities=23% Similarity=0.304 Sum_probs=117.2
Q ss_pred cccceeecCCCCCHHHHHHHHHHHHHH-------hhcccccccCCCcCCCCccccccCchhhhHHHHHHHHHhhcCCCCC
Q psy941 325 ILSNMLVINDFLSAEEEQSLLKEINQF-------IKRQRYEYDHWDDAIHGFRETERSKWNEENTKIIARVQNLAFPPNV 397 (487)
Q Consensus 325 ~~~Gl~~~pdfis~~Ee~~Ll~~l~~~-------l~rrry~~~~w~~~~~~y~~~~~~pwp~~l~~ll~rl~~~~~~~~~ 397 (487)
..|...|||||||++||+.+++.|... |+.||.+ .|++..+.- ..-...+|++++.+.+++.+...-.+
T Consensus 10 ~~pt~~YIPnfIt~EEe~~~lshIe~ap~pkW~~L~NRRLq--NyGGvvh~~-glipeelP~wLq~~v~kinnlglF~s- 85 (224)
T KOG3200|consen 10 SAPTMIYIPNFITEEEENLYLSHIENAPQPKWRVLANRRLQ--NYGGVVHKT-GLIPEELPPWLQYYVDKINNLGLFKS- 85 (224)
T ss_pred ccceEEEcCCccChHHHHHHHHHHhcCCCchhHHHHhhhhh--hcCCccccC-CcCccccCHHHHHHHHHhhcccccCC-
Confidence 345789999999999999999999773 5555543 444433311 11124455667789999987653332
Q ss_pred CCCCeEEEeccCCCCCcccCCCCCcccCCceEEEecCCceEEEEEecCC-------------CCeEEEEEeCCCcEEEec
Q psy941 398 TPIQYVHVLDLEQKGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKT-------------KTQEILVLLKQRSLYVMK 464 (487)
Q Consensus 398 ~~~n~~liN~Y~pG~gI~~H~D~~~~~g~~IaslSLGs~~vm~F~~~~~-------------~~~~~~v~L~~rSLlvms 464 (487)
..|++|||+|.||+||+||.|++ .|-++|++|||||.++|+|..... ....+++.|+++||||+.
T Consensus 86 -~~NHVLVNeY~pgqGImPHtDGP-af~piVstiSlGsh~vldf~~p~r~e~~d~te~~dqp~R~~fsllleprslLilk 163 (224)
T KOG3200|consen 86 -PANHVLVNEYLPGQGIMPHTDGP-AFHPIVSTISLGSHTVLDFYDPVRQEVNDGTESKDQPLRYLFSLLLEPRSLLILK 163 (224)
T ss_pred -CcceeEeecccCCCCcCcCCCCC-cccceEEEEecCCceEEecccccccccCCccccCCCCccceeeeeeccceEEEEc
Confidence 58999999999999999999996 566899999999999999998421 123678999999999999
Q ss_pred cccccccccccccCCc
Q psy941 465 DDARYKFTHEVLENES 480 (487)
Q Consensus 465 G~aRy~w~HgI~~~~~ 480 (487)
|+++..|.|||.....
T Consensus 164 d~aYtd~LHgIs~s~~ 179 (224)
T KOG3200|consen 164 DDAYTDFLHGISDSPT 179 (224)
T ss_pred CcHHHHHHhhcccChH
Confidence 9999999999988765
No 10
>COG3145 AlkB Alkylated DNA repair protein [DNA replication, recombination, and repair]
Probab=99.86 E-value=1.2e-21 Score=184.82 Aligned_cols=158 Identities=17% Similarity=0.230 Sum_probs=116.7
Q ss_pred cccccceeecCCCCCHHHHHHHHHHHHHHh---h--cc---cccc-------cCCCcCCCCcccc-----ccCchhhhHH
Q psy941 323 SSILSNMLVINDFLSAEEEQSLLKEINQFI---K--RQ---RYEY-------DHWDDAIHGFRET-----ERSKWNEENT 382 (487)
Q Consensus 323 ~~~~~Gl~~~pdfis~~Ee~~Ll~~l~~~l---~--rr---ry~~-------~~w~~~~~~y~~~-----~~~pwp~~l~ 382 (487)
..+.+|+.+.++|. -.++.+|++.|...+ . +. .|+. .+|.....+|+.. ...+||. +.
T Consensus 11 ~~~~~G~~~~~~~~-~~~~~~l~~~l~~~~~~~P~~~~~~~~~g~~~sV~r~~~W~~d~~gy~y~~~~p~~~~p~p~-l~ 88 (194)
T COG3145 11 RQLAPGAVILPGFL-LLTQGALVAALLFLLSQAPWFRPRRTPYGKPMSVPRLLGWVTDRRGYRYSLRSPLTGKPWPP-LL 88 (194)
T ss_pred ccCCCCeEEEeccc-ccchHHHHHHHHHhcccCcccceeecCCCcEeeeeeccceecccccccccccccCCCCCCCc-cH
Confidence 45688999999999 666777777666531 1 11 1111 3455544556543 2357754 44
Q ss_pred HHHHHHHhhcCCCCCCCCCeEEEeccCCCCCcccCCCCCcccC-CceEEEecCCceEEEEEecCCCCeEEEEEeCCCcEE
Q psy941 383 KIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKAHVDSVRFCG-NTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLY 461 (487)
Q Consensus 383 ~ll~rl~~~~~~~~~~~~n~~liN~Y~pG~gI~~H~D~~~~~g-~~IaslSLGs~~vm~F~~~~~~~~~~~v~L~~rSLl 461 (487)
.++..+....... +..+++|+||+|+||++|+||+|.++..+ ++|||||||++|+|.|++.+..+...++.|.+|||+
T Consensus 89 ~~~~~~~~~~g~~-~~~~ea~Lvn~Y~pGd~ig~HqD~~e~~~~~~v~slSLg~~~~F~~~~~~r~~~~~~~~L~~Gdvv 167 (194)
T COG3145 89 ALFHDLFGAAGYP-FEGPEAVLVNRYRPGASIGWHQDKDEEDDRPPVASLSLGAPCIFRLRGRRRRGPGLRLRLEHGDVV 167 (194)
T ss_pred HHHHHHHHHhcCC-CCChhheeEEeccCCCccccccccccccCCCceEEEecCCCeEEEeccccCCCCceeEEecCCCEE
Confidence 4555444333211 23578899999999999999999976544 379999999999999999886678999999999999
Q ss_pred EeccccccccccccccCCcccc
Q psy941 462 VMKDDARYKFTHEVLENESLDC 483 (487)
Q Consensus 462 vmsG~aRy~w~HgI~~~~~~~~ 483 (487)
||.|.+|+.|.|.||++....+
T Consensus 168 vm~G~~r~~~~h~~p~~~~~~~ 189 (194)
T COG3145 168 VMGGPSRLAWHHIIPKTSRLTG 189 (194)
T ss_pred EecCCccccccccccccccCCc
Confidence 9999999999999999988764
No 11
>KOG3959|consensus
Probab=99.85 E-value=1.3e-22 Score=192.37 Aligned_cols=158 Identities=25% Similarity=0.394 Sum_probs=134.5
Q ss_pred CCCeEEEcCCCCHHHHHHHHHHHHHHhhccccccCCCCcCCCCcccccC----------------CCCchhhHHHHHHHH
Q psy941 130 LSNMLVINDFLSAEEEQSLLKEINQFIKRQRYEYDHWDDAIHGFRETER----------------SKWNEENTKIIARVQ 193 (487)
Q Consensus 130 ~~Gl~~ipdfls~~Ee~~Ll~~i~~~l~rrry~~~~w~~~i~g~r~~~~----------------~~w~~~~~~i~~rl~ 193 (487)
+||+.+|.||+|++||++|++.++. .+|+-+++|+|+++. -.+|.....+++|+.
T Consensus 71 ~pG~~lie~Fls~~Eea~l~~~~D~---------~pW~~SQSGRRKQdyGPKvNFkk~Klkt~~F~G~P~~~~~v~rrm~ 141 (306)
T KOG3959|consen 71 IPGLTLIENFLSESEEAKLLNMIDT---------VPWAQSQSGRRKQDYGPKVNFKKKKLKTDTFVGMPEYADMVLRRMS 141 (306)
T ss_pred cCCeeehhhhhccchHhHHHHHhcc---------CchhhhcccccccccCCccchhhhhhccCcccCCchHHHHHHHHhh
Confidence 5999999999999999999999997 778888888877652 123444567899998
Q ss_pred hhcCCCCCCCCCeEEEeecCC--CCCCcCCCCCCCccCCeEEEEecCCCeEEEEEecC----------------------
Q psy941 194 NLAFPPNVTPIQYVHVLDLEQ--KGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEK---------------------- 249 (487)
Q Consensus 194 ~~~~~~~~~~~d~~lVN~Y~p--g~gI~~H~D~~~~~g~~IaslSLGs~~vm~F~~~~---------------------- 249 (487)
+.....+|+++.||- .+|.| |..|.||+|+.+.||+.++++.+.++.++.+..++
T Consensus 142 ~yp~l~gfqp~EqCn-LeYep~kgsaIdpH~DD~WiWGeRlv~~n~l~d~vl~lc~~e~~~sg~~nL~~~~s~~~e~l~~ 220 (306)
T KOG3959|consen 142 EYPVLKGFQPFEQCN-LEYEPVKGSAIDPHQDDMWIWGERLVRSNRLFDFVLKLCSKECLASGIINLNTNFSESNEFLSI 220 (306)
T ss_pred ccchhhccCcHHHcC-cccccccCCccCccccchhhhhhheeehhhccHHHHHhhhhhhhccceeeeccCccccccccch
Confidence 877777888899997 68888 89999999999999999999998888877776442
Q ss_pred ----------CCCeEEEEEecCCcEEeecccccccccccccccccCCCCCcccc-cCccccc
Q psy941 250 ----------TKTQEILVLLKQRSLYVMKDDARYKFTHEVLENEKSYFGDLRFK-TFPLIHS 300 (487)
Q Consensus 250 ----------~~~~~~~v~L~~gSLlVm~G~aRy~w~H~Ip~~~~d~~~g~RIs-TfR~~~~ 300 (487)
..+..+.|.+|++||+||.|+|||+|+|+|.+++ ++++||. |||...+
T Consensus 221 ~li~~s~~~l~~~~~~~ipmP~rSLlvl~g~aRyqwkH~vlr~h---i~~RRvcvt~RE~~~ 279 (306)
T KOG3959|consen 221 NLINGSVMTLNKSFLCYIPMPHRSLLVLAGEARYQWKHGVLRHH---IRGRRVCVTMREAAK 279 (306)
T ss_pred hhcccchhhhccceEEEeecCcceeEEeechhHhhHHHHHHHHh---hhhceeeeeHHhhhH
Confidence 0245789999999999999999999999999987 7999999 9999866
No 12
>KOG4176|consensus
Probab=99.75 E-value=2.5e-18 Score=174.12 Aligned_cols=172 Identities=18% Similarity=0.183 Sum_probs=125.8
Q ss_pred ccCCC-eEEEcCCCCHHHHHHHHHHHHHH-------hhccc-----cccCCCCcCCCCcccccCCCCchhhHHHHHHHHh
Q psy941 128 SILSN-MLVINDFLSAEEEQSLLKEINQF-------IKRQR-----YEYDHWDDAIHGFRETERSKWNEENTKIIARVQN 194 (487)
Q Consensus 128 ~~~~G-l~~ipdfls~~Ee~~Ll~~i~~~-------l~rrr-----y~~~~w~~~i~g~r~~~~~~w~~~~~~i~~rl~~ 194 (487)
...+| +.++.||+++.+|+-+...+.+. +++|. |.|.+-.+..+..+. ..+.|..+..+++|+..
T Consensus 124 ~~~~~e~~~~~d~V~el~e~~l~~~~~~e~~~~~~~gk~R~~iq~G~~f~y~~~~~d~~~~--~~piPs~~~~ii~rlv~ 201 (323)
T KOG4176|consen 124 VFIPGELSLIVDFVTELEEKGLIGALVDETFTYQESGKHREVIQLGYPFDYRTNNVDESKP--VDPIPSLFKSIIDRLVS 201 (323)
T ss_pred ccChhhceehhhhhhhhHHhhhhcccccccceeeccccceeeeecCceeccCCCcccccCc--cCCCchHHHHHHHHhhh
Confidence 45566 99999999999999999888752 23332 223332222222221 34567778899999988
Q ss_pred hcCCCCCCCCCeEEEeecCCCCCCcCCCCCCCccCCeEEEEecCCCeEEEEEecCCCC------eEEEEEecCCcEEeec
Q psy941 195 LAFPPNVTPIQYVHVLDLEQKGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKT------QEILVLLKQRSLYVMK 268 (487)
Q Consensus 195 ~~~~~~~~~~d~~lVN~Y~pg~gI~~H~D~~~~~g~~IaslSLGs~~vm~F~~~~~~~------~~~~v~L~~gSLlVm~ 268 (487)
..+.+. .||+|+||+|.+|++|.||+| ++.|+++|++|||.|+|+|.|++..... ....+.|+.||+++|.
T Consensus 202 ~~~ip~--~pd~~~iN~Ye~G~~i~ph~~-~~~F~~Pi~slS~lSe~~m~Fg~~~~~~~~~~~~g~~s~p~~~g~~lvi~ 278 (323)
T KOG4176|consen 202 WRVIPE--RPDQCTINFYEPGDGIPPHID-HSAFLDPISSLSFLSECTMEFGHGLLSDNIGNFRGSLSLPLRYGSVLVIR 278 (323)
T ss_pred hccCCC--CCCeeEEEeeCCCCCCCCCCC-hHHhcCceEEEEeecceeEEecccccccCccccccccccccccCeEEEeC
Confidence 766654 589999999999999999995 5689999999999999999999985321 1345555555666665
Q ss_pred ccccccccccccccccCCCCCcccc-cCcccccCCCCCCCCccccccc
Q psy941 269 DDARYKFTHEVLENEKSYFGDLRFK-TFPLIHSHQSSTSSNQSHIFNE 315 (487)
Q Consensus 269 G~aRy~w~H~Ip~~~~d~~~g~RIs-TfR~~~~~~~~~~~~~~c~~~~ 315 (487)
|.+...=.|++.. .+..||+ |||++++ . +|.|.++.
T Consensus 279 ~~~ad~~~~~~~~-----~~~kRisitfrki~~--~----~~~~~~~~ 315 (323)
T KOG4176|consen 279 GRSADVAPHCIRP-----SRNKRISITFRKIRP--D----PCFCEPPP 315 (323)
T ss_pred CCcccccccccCC-----CCCceEEEEEEEecc--C----CCCCCCCC
Confidence 5555555555555 5789999 9999999 3 88998877
No 13
>KOG3959|consensus
Probab=99.72 E-value=1.5e-18 Score=164.98 Aligned_cols=146 Identities=25% Similarity=0.418 Sum_probs=118.6
Q ss_pred ccccceeecCCCCCHHHHHHHHHHHHHHhhcccccccCCCcCCCCcccccc----------------CchhhhHHHHHHH
Q psy941 324 SILSNMLVINDFLSAEEEQSLLKEINQFIKRQRYEYDHWDDAIHGFRETER----------------SKWNEENTKIIAR 387 (487)
Q Consensus 324 ~~~~Gl~~~pdfis~~Ee~~Ll~~l~~~l~rrry~~~~w~~~~~~y~~~~~----------------~pwp~~l~~ll~r 387 (487)
..+||+.+++||+|++||++|++.++. ..|+.+++|.|++++ -.+|.....++.|
T Consensus 69 ~p~pG~~lie~Fls~~Eea~l~~~~D~---------~pW~~SQSGRRKQdyGPKvNFkk~Klkt~~F~G~P~~~~~v~rr 139 (306)
T KOG3959|consen 69 IPIPGLTLIENFLSESEEAKLLNMIDT---------VPWAQSQSGRRKQDYGPKVNFKKKKLKTDTFVGMPEYADMVLRR 139 (306)
T ss_pred cccCCeeehhhhhccchHhHHHHHhcc---------CchhhhcccccccccCCccchhhhhhccCcccCCchHHHHHHHH
Confidence 457899999999999999999999987 355555555544433 3567777788889
Q ss_pred HHhhcCCCCCCCCCeEEEeccCC--CCCcccCCCCCcccCCceEEEecCCceEEEEEecC--------------------
Q psy941 388 VQNLAFPPNVTPIQYVHVLDLEQ--KGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEK-------------------- 445 (487)
Q Consensus 388 l~~~~~~~~~~~~n~~liN~Y~p--G~gI~~H~D~~~~~g~~IaslSLGs~~vm~F~~~~-------------------- 445 (487)
+.+.....+|.++.||. .+|.| |+.|.||+|+.+.||+.++++.+..+.++.+..++
T Consensus 140 m~~yp~l~gfqp~EqCn-LeYep~kgsaIdpH~DD~WiWGeRlv~~n~l~d~vl~lc~~e~~~sg~~nL~~~~s~~~e~l 218 (306)
T KOG3959|consen 140 MSEYPVLKGFQPFEQCN-LEYEPVKGSAIDPHQDDMWIWGERLVRSNRLFDFVLKLCSKECLASGIINLNTNFSESNEFL 218 (306)
T ss_pred hhccchhhccCcHHHcC-cccccccCCccCccccchhhhhhheeehhhccHHHHHhhhhhhhccceeeeccCcccccccc
Confidence 98766666778899998 68887 78999999999999999999988888887776543
Q ss_pred ------------CCCeEEEEEeCCCcEEEeccccccccccccccCC
Q psy941 446 ------------TKTQEILVLLKQRSLYVMKDDARYKFTHEVLENE 479 (487)
Q Consensus 446 ------------~~~~~~~v~L~~rSLlvmsG~aRy~w~HgI~~~~ 479 (487)
..+..+.|.+|++||+||.|+|||.|+|+|.++.
T Consensus 219 ~~~li~~s~~~l~~~~~~~ipmP~rSLlvl~g~aRyqwkH~vlr~h 264 (306)
T KOG3959|consen 219 SINLINGSVMTLNKSFLCYIPMPHRSLLVLAGEARYQWKHGVLRHH 264 (306)
T ss_pred chhhcccchhhhccceEEEeecCcceeEEeechhHhhHHHHHHHHh
Confidence 0234678999999999999999999999998754
No 14
>KOG4176|consensus
Probab=99.47 E-value=7e-14 Score=141.87 Aligned_cols=149 Identities=18% Similarity=0.214 Sum_probs=104.3
Q ss_pred ccccc-eeecCCCCCHHHHHHHHHHHHHH-------hhcc-----cccccCCCcCCCCccccccCchhhhHHHHHHHHHh
Q psy941 324 SILSN-MLVINDFLSAEEEQSLLKEINQF-------IKRQ-----RYEYDHWDDAIHGFRETERSKWNEENTKIIARVQN 390 (487)
Q Consensus 324 ~~~~G-l~~~pdfis~~Ee~~Ll~~l~~~-------l~rr-----ry~~~~w~~~~~~y~~~~~~pwp~~l~~ll~rl~~ 390 (487)
...+| +.++.+|+++.+|+.|+..+... +++| |+.+.|-....+.++. ..|.|..+..+++|+..
T Consensus 124 ~~~~~e~~~~~d~V~el~e~~l~~~~~~e~~~~~~~gk~R~~iq~G~~f~y~~~~~d~~~~--~~piPs~~~~ii~rlv~ 201 (323)
T KOG4176|consen 124 VFIPGELSLIVDFVTELEEKGLIGALVDETFTYQESGKHREVIQLGYPFDYRTNNVDESKP--VDPIPSLFKSIIDRLVS 201 (323)
T ss_pred ccChhhceehhhhhhhhHHhhhhcccccccceeeccccceeeeecCceeccCCCcccccCc--cCCCchHHHHHHHHhhh
Confidence 34566 99999999999999999888663 2222 2333322222221111 45678888999999987
Q ss_pred hcCCCCCCCCCeEEEeccCCCCCcccCCCCCcccCCceEEEecCCceEEEEEecCCC------CeEEEEEeCCCcEEEec
Q psy941 391 LAFPPNVTPIQYVHVLDLEQKGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTK------TQEILVLLKQRSLYVMK 464 (487)
Q Consensus 391 ~~~~~~~~~~n~~liN~Y~pG~gI~~H~D~~~~~g~~IaslSLGs~~vm~F~~~~~~------~~~~~v~L~~rSLlvms 464 (487)
....++ .+|||+||.|.||++|.+|+|+ ..|+++|++|||.|+|+|.|++.... ....++.|+.||+++|.
T Consensus 202 ~~~ip~--~pd~~~iN~Ye~G~~i~ph~~~-~~F~~Pi~slS~lSe~~m~Fg~~~~~~~~~~~~g~~s~p~~~g~~lvi~ 278 (323)
T KOG4176|consen 202 WRVIPE--RPDQCTINFYEPGDGIPPHIDH-SAFLDPISSLSFLSECTMEFGHGLLSDNIGNFRGSLSLPLRYGSVLVIR 278 (323)
T ss_pred hccCCC--CCCeeEEEeeCCCCCCCCCCCh-HHhcCceEEEEeecceeEEecccccccCccccccccccccccCeEEEeC
Confidence 765443 6999999999999999999965 68999999999999999999997421 11345555555555555
Q ss_pred ccccccccccccc
Q psy941 465 DDARYKFTHEVLE 477 (487)
Q Consensus 465 G~aRy~w~HgI~~ 477 (487)
|.+-.-=.|++..
T Consensus 279 ~~~ad~~~~~~~~ 291 (323)
T KOG4176|consen 279 GRSADVAPHCIRP 291 (323)
T ss_pred CCcccccccccCC
Confidence 5555555555444
No 15
>KOG2731|consensus
Probab=97.59 E-value=4.9e-05 Score=77.59 Aligned_cols=78 Identities=14% Similarity=0.011 Sum_probs=69.7
Q ss_pred CCeEEEeecCCCCCCcCCCCCC-CccCCeEEEEecCCCeEEEEEecCCCCeEEEEEecCCcEEeeccccccccccccccc
Q psy941 204 IQYVHVLDLEQKGYIKAHVDSV-RFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTHEVLEN 282 (487)
Q Consensus 204 ~d~~lVN~Y~pg~gI~~H~D~~-~~~g~~IaslSLGs~~vm~F~~~~~~~~~~~v~L~~gSLlVm~G~aRy~w~H~Ip~~ 282 (487)
++.+|+|+|.+++.++-|.|.. ..++.++.+.|+|.+|++.++.....+.+..++|..|+.++|.|.+|..+ |+|+..
T Consensus 216 ~~Gli~nYlsi~~tl~ih~d~reld~~~pf~s~s~g~~ai~lLg~m~l~e~p~p~~lrsGdv~im~Gfsrlv~-haIp~s 294 (378)
T KOG2731|consen 216 RPGLIKNYLSIDDTLGIHLDCRELDLSKPFYSPSLGQGAILLLGMMCLGENPDPMTLRSGDVVIMDGFSRLVE-HAIPES 294 (378)
T ss_pred cCcceeeecccCcEEEEEeehhhcccCCccccccccccceeeecccccCCCCCccccccCceEeecchHHHHh-hccchh
Confidence 4568999999999999999984 35667899999999999999998766678889999999999999999999 999964
No 16
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues. Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor.
Probab=97.50 E-value=0.0034 Score=58.69 Aligned_cols=156 Identities=19% Similarity=0.168 Sum_probs=88.3
Q ss_pred CCeEEEcCCCCHHHHHHHHHHHHHHhhccccccCCCCc-CCCCcccccCCCCc------hhhHHHHHHHHhhcCCCC--C
Q psy941 131 SNMLVINDFLSAEEEQSLLKEINQFIKRQRYEYDHWDD-AIHGFRETERSKWN------EENTKIIARVQNLAFPPN--V 201 (487)
Q Consensus 131 ~Gl~~ipdfls~~Ee~~Ll~~i~~~l~rrry~~~~w~~-~i~g~r~~~~~~w~------~~~~~i~~rl~~~~~~~~--~ 201 (487)
|++.+++||||++|.+.|++.......+.......-.. ..+.+|.. ...|. +....+.+|+.+...... .
T Consensus 1 P~i~~~~~~ls~~ec~~li~~~~~~~~~~~~~~~~~~~~~~~~~R~~-~~~~l~~~~~~~~~~~l~~~i~~~~~~~~~~~ 79 (178)
T smart00702 1 PGVVVFHDFLSPAECQKLLEEAEPLGWRGEVTRGDTNPNHDSKYRQS-NGTWLELLKGDLVIERIRQRLADFLGLLRGLP 79 (178)
T ss_pred CcEEEECCCCCHHHHHHHHHHhhhhcccceeecCCCCccccCCCEee-cceecCCCCCCHHHHHHHHHHHHHHCCCchhh
Confidence 67999999999999999999998743221110000000 11234432 11222 224456667666432210 1
Q ss_pred CCCCeEEEeecCCCCCCcCCCCCCCcc--CCeEEEEec--CC---CeEEEEEecCCCCeEEEEEecCCcEEeeccccccc
Q psy941 202 TPIQYVHVLDLEQKGYIKAHVDSVRFC--GNTIAGLSL--LS---DSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYK 274 (487)
Q Consensus 202 ~~~d~~lVN~Y~pg~gI~~H~D~~~~~--g~~IaslSL--Gs---~~vm~F~~~~~~~~~~~v~L~~gSLlVm~G~aRy~ 274 (487)
.....+.|+.|.+|+...+|.|..... +..++++-+ .. .--+.|.... ......|.-..|+++++...-. .
T Consensus 80 ~~~~~~~~~~Y~~g~~~~~H~D~~~~~~~~~r~~T~~~yLn~~~~GG~~~f~~~~-~~~~~~v~P~~G~~v~f~~~~~-~ 157 (178)
T smart00702 80 LSAEDAQVARYGPGGHYGPHVDNFEDDENGDRIATFLLYLNDVEEGGELVFPGLG-LMVCATVKPKKGDLLFFPSGRG-R 157 (178)
T ss_pred ccCcceEEEEECCCCcccCcCCCCCCCCCCCeEEEEEEEeccCCcCceEEecCCC-CccceEEeCCCCcEEEEeCCCC-C
Confidence 234688899999999999999986422 133333321 11 0112222211 1124578888999999875422 3
Q ss_pred ccccccccccCCCCCcccc
Q psy941 275 FTHEVLENEKSYFGDLRFK 293 (487)
Q Consensus 275 w~H~Ip~~~~d~~~g~RIs 293 (487)
..|++.+.. .|.|++
T Consensus 158 ~~H~v~pv~----~G~r~~ 172 (178)
T smart00702 158 SLHGVCPVT----RGSRWA 172 (178)
T ss_pred ccccCCcce----eCCEEE
Confidence 349999864 477876
No 17
>KOG2731|consensus
Probab=97.49 E-value=9.9e-05 Score=75.39 Aligned_cols=96 Identities=14% Similarity=0.024 Sum_probs=75.2
Q ss_pred HHHHHHhhcCCCCCCCCCeEEEeccCCCCCcccCCCCCc-ccCCceEEEecCCceEEEEEecCCCCeEEEEEeCCCcEEE
Q psy941 384 IIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKAHVDSVR-FCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYV 462 (487)
Q Consensus 384 ll~rl~~~~~~~~~~~~n~~liN~Y~pG~gI~~H~D~~~-~~g~~IaslSLGs~~vm~F~~~~~~~~~~~v~L~~rSLlv 462 (487)
..+++.+...-.++...+.+++|+|.+++.++-|.|..+ .++.++.+.|||.++++.++-....+....++|..|+.++
T Consensus 200 ~~~~~~~a~~~~~~~~~~Gli~nYlsi~~tl~ih~d~reld~~~pf~s~s~g~~ai~lLg~m~l~e~p~p~~lrsGdv~i 279 (378)
T KOG2731|consen 200 LREKVKAAKGFSHIVIRPGLIKNYLSIDDTLGIHLDCRELDLSKPFYSPSLGQGAILLLGMMCLGENPDPMTLRSGDVVI 279 (378)
T ss_pred hhhhhhhhcCccceeccCcceeeecccCcEEEEEeehhhcccCCccccccccccceeeecccccCCCCCccccccCceEe
Confidence 334444433323334456789999999999999999844 5667899999999999999877555567789999999999
Q ss_pred eccccccccccccccCCc
Q psy941 463 MKDDARYKFTHEVLENES 480 (487)
Q Consensus 463 msG~aRy~w~HgI~~~~~ 480 (487)
|+|.+|..+ |+|+....
T Consensus 280 m~Gfsrlv~-haIp~s~s 296 (378)
T KOG2731|consen 280 MDGFSRLVE-HAIPESRS 296 (378)
T ss_pred ecchHHHHh-hccchhce
Confidence 999999999 99995443
No 18
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit. The holoenzyme has the activity (1.14.11.2 from EC) catalysing the reaction: Procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2. The full enzyme consists of a alpha2 beta2 complex with the alpha subunit contributing most of the parts of the active site []. The family also includes lysyl hydrolases, isopenicillin synthases and AlkB. ; GO: 0016491 oxidoreductase activity, 0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, 0055114 oxidation-reduction process; PDB: 3ON7_D 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=97.46 E-value=8.5e-05 Score=62.55 Aligned_cols=81 Identities=15% Similarity=0.092 Sum_probs=50.8
Q ss_pred CeEEEeecC---CCCCCcCCCCCCCccCCeEEEEecC-CCeEEEEEecCCCCeEEEEEecCCcEEeeccc--------cc
Q psy941 205 QYVHVLDLE---QKGYIKAHVDSVRFCGNTIAGLSLL-SDSVMKLVDEKTKTQEILVLLKQRSLYVMKDD--------AR 272 (487)
Q Consensus 205 d~~lVN~Y~---pg~gI~~H~D~~~~~g~~IaslSLG-s~~vm~F~~~~~~~~~~~v~L~~gSLlVm~G~--------aR 272 (487)
+++.+|+|. .+.++++|.|.+ +.+++|-+. +..-+.|.... .++.+...++.++|+-|+ .+
T Consensus 2 ~~~~~~~Y~~~~~~~~~~~H~D~~----~~~~Til~~~~~~gL~~~~~~---~~~~v~~~~~~~~v~~G~~l~~~t~g~~ 74 (98)
T PF03171_consen 2 SQLRLNRYPPPENGVGIGPHTDDE----DGLLTILFQDEVGGLQVRDDG---EWVDVPPPPGGFIVNFGDALEILTNGRY 74 (98)
T ss_dssp -EEEEEEE-SCCGCEEEEEEEES------SSEEEEEETSTS-EEEEETT---EEEE----TTCEEEEEBHHHHHHTTTSS
T ss_pred CEEEEEECCCcccCCceeCCCcCC----CCeEEEEecccchheeccccc---cccCccCccceeeeeceeeeecccCCcc
Confidence 689999999 678999999985 345555554 77778888774 567777777777777777 78
Q ss_pred ccccccccccccCCCCCcccc-cCc
Q psy941 273 YKFTHEVLENEKSYFGDLRFK-TFP 296 (487)
Q Consensus 273 y~w~H~Ip~~~~d~~~g~RIs-TfR 296 (487)
..+.|+|.... .+.|+| ||+
T Consensus 75 ~~~~HrV~~~~----~~~R~s~~~f 95 (98)
T PF03171_consen 75 PATLHRVVPPT----EGERYSLTFF 95 (98)
T ss_dssp ----EEEE--S----TS-EEEEEEE
T ss_pred CCceeeeEcCC----CCCEEEEEEE
Confidence 88999999864 689999 875
No 19
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional
Probab=97.43 E-value=0.002 Score=63.16 Aligned_cols=143 Identities=18% Similarity=0.131 Sum_probs=80.2
Q ss_pred eEEEcCCCCHHHHHHHHHHHHHHhhccccccCCCCcCC--CC-----ccc-ccCCCCchhhHHHHHHHHhhc----CCCC
Q psy941 133 MLVINDFLSAEEEQSLLKEINQFIKRQRYEYDHWDDAI--HG-----FRE-TERSKWNEENTKIIARVQNLA----FPPN 200 (487)
Q Consensus 133 l~~ipdfls~~Ee~~Ll~~i~~~l~rrry~~~~w~~~i--~g-----~r~-~~~~~w~~~~~~i~~rl~~~~----~~~~ 200 (487)
+.+|+|+||++|.+++++.+.+ ..|.++- .| +|. ..+..=.+....+.+++.+.. ....
T Consensus 2 i~~I~~vLs~eec~~~~~~le~---------~~~~dg~~taG~~~~~vKnN~ql~~d~~~a~~l~~~i~~~L~~~~l~~s 72 (226)
T PRK05467 2 LLHIPDVLSPEEVAQIRELLDA---------AEWVDGRVTAGAQAAQVKNNQQLPEDSPLARELGNLILDALTRNPLFFS 72 (226)
T ss_pred eeeecccCCHHHHHHHHHHHHh---------cCCccCCcCcCccchhcccccccCCCCHHHHHHHHHHHHHHhcCchhhh
Confidence 5789999999999999999986 2332210 01 111 112222222333444444321 1001
Q ss_pred CCCCC---eEEEeecCCCCCCcCCCCCCCcc----CCe---EEE--EecCC-----CeEEEEEecCCCCeEEEEEecCCc
Q psy941 201 VTPIQ---YVHVLDLEQKGYIKAHVDSVRFC----GNT---IAG--LSLLS-----DSVMKLVDEKTKTQEILVLLKQRS 263 (487)
Q Consensus 201 ~~~~d---~~lVN~Y~pg~gI~~H~D~~~~~----g~~---Ias--lSLGs-----~~vm~F~~~~~~~~~~~v~L~~gS 263 (487)
...|. ..++|.|.+|+..++|+|+.-.. +.. ..| |-|.. ..-+.|... .....|.++.|+
T Consensus 73 a~lp~~i~~~~f~rY~~G~~y~~H~D~~~~~~~~~~~~~rs~lS~~lyLnd~~~yeGGEl~~~~~---~g~~~Vkp~aG~ 149 (226)
T PRK05467 73 AALPRKIHPPLFNRYEGGMSYGFHVDNAVRSLPGTGGRVRTDLSATLFLSDPDDYDGGELVIEDT---YGEHRVKLPAGD 149 (226)
T ss_pred hccccccccceEEEECCCCccCccccCCcccCCCCCcceeEEEEEEEEeCCCCCCcCCceEEecC---CCcEEEecCCCe
Confidence 11122 56789999999999999995332 111 111 11211 111222211 124678999999
Q ss_pred EEeecccccccccccccccccCCCCCcccc-cC
Q psy941 264 LYVMKDDARYKFTHEVLENEKSYFGDLRFK-TF 295 (487)
Q Consensus 264 LlVm~G~aRy~w~H~Ip~~~~d~~~g~RIs-Tf 295 (487)
++++... ..|++.++. .|.|++ |+
T Consensus 150 ~vlfps~----~lH~v~pVt----~G~R~~~~~ 174 (226)
T PRK05467 150 LVLYPST----SLHRVTPVT----RGVRVASFF 174 (226)
T ss_pred EEEECCC----Cceeeeecc----CccEEEEEe
Confidence 9999864 459999874 677877 53
No 20
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues. Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor.
Probab=97.03 E-value=0.015 Score=54.24 Aligned_cols=152 Identities=18% Similarity=0.134 Sum_probs=83.1
Q ss_pred cceeecCCCCCHHHHHHHHHHHHHHhhcccccccCCCc-CCCCccccc--cCch---hhhHHHHHHHHHhhcCCCC--CC
Q psy941 327 SNMLVINDFLSAEEEQSLLKEINQFIKRQRYEYDHWDD-AIHGFRETE--RSKW---NEENTKIIARVQNLAFPPN--VT 398 (487)
Q Consensus 327 ~Gl~~~pdfis~~Ee~~Ll~~l~~~l~rrry~~~~w~~-~~~~y~~~~--~~pw---p~~l~~ll~rl~~~~~~~~--~~ 398 (487)
|++++++||||++|.+.|++.....+.+.......... ..+.||... .-.+ .+....+.+++.+...... ..
T Consensus 1 P~i~~~~~~ls~~ec~~li~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~l~~~~~~~~~~~l~~~i~~~~~~~~~~~~ 80 (178)
T smart00702 1 PGVVVFHDFLSPAECQKLLEEAEPLGWRGEVTRGDTNPNHDSKYRQSNGTWLELLKGDLVIERIRQRLADFLGLLRGLPL 80 (178)
T ss_pred CcEEEECCCCCHHHHHHHHHHhhhhcccceeecCCCCccccCCCEeecceecCCCCCCHHHHHHHHHHHHHHCCCchhhc
Confidence 57899999999999999999987753211110000000 112233211 0111 2334566677776543220 12
Q ss_pred CCCeEEEeccCCCCCcccCCCCCccc--CCceEEEec--CC---ceEEEEEecCCCCeEEEEEeCCCcEEEecccccccc
Q psy941 399 PIQYVHVLDLEQKGYIKAHVDSVRFC--GNTIAGLSL--LS---DSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKF 471 (487)
Q Consensus 399 ~~n~~liN~Y~pG~gI~~H~D~~~~~--g~~IaslSL--Gs---~~vm~F~~~~~~~~~~~v~L~~rSLlvmsG~aRy~w 471 (487)
....+.+..|.+|+...+|.|..... +..++++-+ .. .--+.|.... ......|.-..|+++++...-. ..
T Consensus 81 ~~~~~~~~~Y~~g~~~~~H~D~~~~~~~~~r~~T~~~yLn~~~~GG~~~f~~~~-~~~~~~v~P~~G~~v~f~~~~~-~~ 158 (178)
T smart00702 81 SAEDAQVARYGPGGHYGPHVDNFEDDENGDRIATFLLYLNDVEEGGELVFPGLG-LMVCATVKPKKGDLLFFPSGRG-RS 158 (178)
T ss_pred cCcceEEEEECCCCcccCcCCCCCCCCCCCeEEEEEEEeccCCcCceEEecCCC-CccceEEeCCCCcEEEEeCCCC-Cc
Confidence 34688899999999999999985322 123332211 10 0012222111 0124478888999999875422 34
Q ss_pred ccccccCCc
Q psy941 472 THEVLENES 480 (487)
Q Consensus 472 ~HgI~~~~~ 480 (487)
.|++.+...
T Consensus 159 ~H~v~pv~~ 167 (178)
T smart00702 159 LHGVCPVTR 167 (178)
T ss_pred cccCCccee
Confidence 488877653
No 21
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional
Probab=96.42 E-value=0.042 Score=53.99 Aligned_cols=134 Identities=19% Similarity=0.139 Sum_probs=72.1
Q ss_pred eeecCCCCCHHHHHHHHHHHHHHhhcccccccCCCcCC-------CCcccc-ccCchhhhHHHHHHHHHhhcCC------
Q psy941 329 MLVINDFLSAEEEQSLLKEINQFIKRQRYEYDHWDDAI-------HGFRET-ERSKWNEENTKIIARVQNLAFP------ 394 (487)
Q Consensus 329 l~~~pdfis~~Ee~~Ll~~l~~~l~rrry~~~~w~~~~-------~~y~~~-~~~pwp~~l~~ll~rl~~~~~~------ 394 (487)
+..++|+||++|.+++++.++.. .|..+. ..++.+ .+..=.+....+.+++.+....
T Consensus 2 i~~I~~vLs~eec~~~~~~le~~---------~~~dg~~taG~~~~~vKnN~ql~~d~~~a~~l~~~i~~~L~~~~l~~s 72 (226)
T PRK05467 2 LLHIPDVLSPEEVAQIRELLDAA---------EWVDGRVTAGAQAAQVKNNQQLPEDSPLARELGNLILDALTRNPLFFS 72 (226)
T ss_pred eeeecccCCHHHHHHHHHHHHhc---------CCccCCcCcCccchhcccccccCCCCHHHHHHHHHHHHHHhcCchhhh
Confidence 46789999999999999999872 332110 112211 1111112223333333332210
Q ss_pred CCCC-CCCeEEEeccCCCCCcccCCCCCccc--C--Cce-----EEEecCCc-----eEEEEEecCCCCeEEEEEeCCCc
Q psy941 395 PNVT-PIQYVHVLDLEQKGYIKAHVDSVRFC--G--NTI-----AGLSLLSD-----SVMKLVDEKTKTQEILVLLKQRS 459 (487)
Q Consensus 395 ~~~~-~~n~~liN~Y~pG~gI~~H~D~~~~~--g--~~I-----aslSLGs~-----~vm~F~~~~~~~~~~~v~L~~rS 459 (487)
...+ .....++|.|.+|+..++|+|+.... | ..+ +.|-|..+ -.+.|... .....|.++.|+
T Consensus 73 a~lp~~i~~~~f~rY~~G~~y~~H~D~~~~~~~~~~~~~rs~lS~~lyLnd~~~yeGGEl~~~~~---~g~~~Vkp~aG~ 149 (226)
T PRK05467 73 AALPRKIHPPLFNRYEGGMSYGFHVDNAVRSLPGTGGRVRTDLSATLFLSDPDDYDGGELVIEDT---YGEHRVKLPAGD 149 (226)
T ss_pred hccccccccceEEEECCCCccCccccCCcccCCCCCcceeEEEEEEEEeCCCCCCcCCceEEecC---CCcEEEecCCCe
Confidence 0000 12256789999999999999995322 1 111 11112211 11222211 124679999999
Q ss_pred EEEeccccccccccccccC
Q psy941 460 LYVMKDDARYKFTHEVLEN 478 (487)
Q Consensus 460 LlvmsG~aRy~w~HgI~~~ 478 (487)
++++... ..|++.+.
T Consensus 150 ~vlfps~----~lH~v~pV 164 (226)
T PRK05467 150 LVLYPST----SLHRVTPV 164 (226)
T ss_pred EEEECCC----Cceeeeec
Confidence 9999864 45888763
No 22
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit. The holoenzyme has the activity (1.14.11.2 from EC) catalysing the reaction: Procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2. The full enzyme consists of a alpha2 beta2 complex with the alpha subunit contributing most of the parts of the active site []. The family also includes lysyl hydrolases, isopenicillin synthases and AlkB. ; GO: 0016491 oxidoreductase activity, 0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, 0055114 oxidation-reduction process; PDB: 3ON7_D 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=95.81 E-value=0.0081 Score=50.38 Aligned_cols=72 Identities=13% Similarity=0.048 Sum_probs=43.2
Q ss_pred CeEEEeccC---CCCCcccCCCCCcccCCceEEEecC-CceEEEEEecCCCCeEEEEEeCCCcEEEeccc--------cc
Q psy941 401 QYVHVLDLE---QKGYIKAHVDSVRFCGNTIAGLSLL-SDSVMKLVDEKTKTQEILVLLKQRSLYVMKDD--------AR 468 (487)
Q Consensus 401 n~~liN~Y~---pG~gI~~H~D~~~~~g~~IaslSLG-s~~vm~F~~~~~~~~~~~v~L~~rSLlvmsG~--------aR 468 (487)
+++.+|+|. .+.++++|.|.. +.+++|-+. ...-+.|.... ..+.+...++.++|+.|+ .+
T Consensus 2 ~~~~~~~Y~~~~~~~~~~~H~D~~----~~~~Til~~~~~~gL~~~~~~---~~~~v~~~~~~~~v~~G~~l~~~t~g~~ 74 (98)
T PF03171_consen 2 SQLRLNRYPPPENGVGIGPHTDDE----DGLLTILFQDEVGGLQVRDDG---EWVDVPPPPGGFIVNFGDALEILTNGRY 74 (98)
T ss_dssp -EEEEEEE-SCCGCEEEEEEEES------SSEEEEEETSTS-EEEEETT---EEEE----TTCEEEEEBHHHHHHTTTSS
T ss_pred CEEEEEECCCcccCCceeCCCcCC----CCeEEEEecccchheeccccc---cccCccCccceeeeeceeeeecccCCcc
Confidence 578999999 567999999985 345555554 77778888664 466666667777777777 78
Q ss_pred cccccccccCC
Q psy941 469 YKFTHEVLENE 479 (487)
Q Consensus 469 y~w~HgI~~~~ 479 (487)
..+.|.+....
T Consensus 75 ~~~~HrV~~~~ 85 (98)
T PF03171_consen 75 PATLHRVVPPT 85 (98)
T ss_dssp ----EEEE--S
T ss_pred CCceeeeEcCC
Confidence 88889888765
No 23
>COG3128 PiuC Uncharacterized iron-regulated protein [Function unknown]
Probab=95.52 E-value=0.067 Score=50.66 Aligned_cols=82 Identities=20% Similarity=0.149 Sum_probs=52.7
Q ss_pred EEeecCCCCCCcCCCCCCCcc-CC--eEEEEecCCCeEEEEEecCC---C-------CeEEEEEecCCcEEeeccccccc
Q psy941 208 HVLDLEQKGYIKAHVDSVRFC-GN--TIAGLSLLSDSVMKLVDEKT---K-------TQEILVLLKQRSLYVMKDDARYK 274 (487)
Q Consensus 208 lVN~Y~pg~gI~~H~D~~~~~-g~--~IaslSLGs~~vm~F~~~~~---~-------~~~~~v~L~~gSLlVm~G~aRy~ 274 (487)
+.|.|..|+..++|+|+--.. .+ .. .++---.|+..+..+++ + -....|.||.|||++.-+.+
T Consensus 85 ~Fn~Y~eg~~f~fHvDgavr~~hp~~~~-~lrtdls~tlfl~DPedYdGGeLVv~dtYg~h~VklPAGdLVlypStS--- 160 (229)
T COG3128 85 LFNRYQEGDFFGFHVDGAVRSIHPGSGF-RLRTDLSCTLFLSDPEDYDGGELVVNDTYGNHRVKLPAGDLVLYPSTS--- 160 (229)
T ss_pred hhhhccCCCcccccccCcccccCCCCCc-eeEeeeeeeeecCCccccCCceEEEeccccceEEeccCCCEEEccccc---
Confidence 359999999999999984332 11 11 22222234444444331 1 12578999999999998877
Q ss_pred ccccccccccCCCCCcccccCccc
Q psy941 275 FTHEVLENEKSYFGDLRFKTFPLI 298 (487)
Q Consensus 275 w~H~Ip~~~~d~~~g~RIsTfR~~ 298 (487)
.|.|.++. +|.|+.-|=++
T Consensus 161 -lH~VtPVT----Rg~R~asffW~ 179 (229)
T COG3128 161 -LHEVTPVT----RGERFASFFWI 179 (229)
T ss_pred -ceeccccc----cCceEEEeeeh
Confidence 68888874 67777643333
No 24
>PLN00052 prolyl 4-hydroxylase; Provisional
Probab=95.25 E-value=0.3 Score=50.27 Aligned_cols=160 Identities=15% Similarity=0.158 Sum_probs=88.6
Q ss_pred ccCCCeEEEcCCCCHHHHHHHHHHHHHHhhcccc-ccCCCCcCCCCcccccCCCCc-----hhhHHHHHHHHhhcCCCCC
Q psy941 128 SILSNMLVINDFLSAEEEQSLLKEINQFIKRQRY-EYDHWDDAIHGFRETERSKWN-----EENTKIIARVQNLAFPPNV 201 (487)
Q Consensus 128 ~~~~Gl~~ipdfls~~Ee~~Ll~~i~~~l~rrry-~~~~w~~~i~g~r~~~~~~w~-----~~~~~i~~rl~~~~~~~~~ 201 (487)
..-|-+.+++||||++|.+.|++.....+.+.+. .........+.+|... ..|. +....|.+|+.+....+ .
T Consensus 51 S~~P~i~~~~nfLs~~Ecd~Li~la~~~l~~S~v~~~~~g~~~~s~~RTS~-~~~l~~~~dpvv~~I~~Ria~~t~lp-~ 128 (310)
T PLN00052 51 SWQPRIFVYKGFLSDAECDHLVKLAKKKIQRSMVADNKSGKSVMSEVRTSS-GMFLDKRQDPVVSRIEERIAAWTFLP-E 128 (310)
T ss_pred cCCCCEEEECCcCCHHHHHHHHHhcccccccceeecCCCCccccCCCEEec-ceeecCCCCHHHHHHHHHHHHHhCCC-c
Confidence 4568999999999999999999998876655432 1111111123344321 1122 23556777777643222 1
Q ss_pred CCCCeEEEeecCCCCCCcCCCCCCC------ccCCeEEEEe-------cCCCeEEEEEecCCC-----------CeEEEE
Q psy941 202 TPIQYVHVLDLEQKGYIKAHVDSVR------FCGNTIAGLS-------LLSDSVMKLVDEKTK-----------TQEILV 257 (487)
Q Consensus 202 ~~~d~~lVN~Y~pg~gI~~H~D~~~------~~g~~IaslS-------LGs~~vm~F~~~~~~-----------~~~~~v 257 (487)
..-..+-|..|.+|+.-.+|.|-.. .-|..+++|- -|++.+|-....... ...+.|
T Consensus 129 ~~~E~lQVlrY~~Gq~Y~~H~D~~~~~~~~~~gg~R~aTvL~YLndv~~GGeT~FP~~~~~~~~~~~~~~s~c~~~gl~V 208 (310)
T PLN00052 129 ENAENIQILRYEHGQKYEPHFDYFHDKINQALGGHRYATVLMYLSTVDKGGETVFPNAEGWENQPKDDTFSECAHKGLAV 208 (310)
T ss_pred ccCcceEEEecCCCCCCCCCCCccccccccccCCceeEEEEEEeccCCCCCceecCCcccccccccccchhhhhcCCeEe
Confidence 1234677788999999999999532 1234444432 455544443211000 013556
Q ss_pred EecCCcEEeeccc-----ccccccccccccccCCCCCcccc
Q psy941 258 LLKQRSLYVMKDD-----ARYKFTHEVLENEKSYFGDLRFK 293 (487)
Q Consensus 258 ~L~~gSLlVm~G~-----aRy~w~H~Ip~~~~d~~~g~RIs 293 (487)
.=..|+.+++--- .-..=.|+.-++ ..|.++.
T Consensus 209 kPkkG~ALlF~nl~~dG~~D~~SlHagcPV----i~G~Kw~ 245 (310)
T PLN00052 209 KPVKGDAVLFFSLHIDGVPDPLSLHGSCPV----IEGEKWS 245 (310)
T ss_pred ccCcceEEEEeccCCCCCCCcccccCCCee----ecCeEEE
Confidence 6667777776431 111223665554 3566666
No 25
>PF12933 FTO_NTD: FTO catalytic domain; InterPro: IPR024367 Alpha-ketoglutarate-dependent dioxygenase FTO, also known as Fat mass and obesity-associated protein, is a nucleus protein which belongs to the FTO family. This enzyme is a dioxygenase that repairs alkylated DNA and RNA by oxidative demethylation []. FTO activity is highest towards single-stranded RNA containing 3-methyluracil, followed by single-stranded DNA containing 3-methylthymine. FTO has low demethylase activity towards single-stranded DNA containing 1-methyladenine or 3-methylcytosine []. FTO has no activity towards 1-methylguanine. It has no detectable activity towards double-stranded DNA. FTO requires molecular oxygen, alpha-ketoglutarate and iron. FTO contributes to the regulation of the global metabolic rate, energy expenditure and energy homeostasis. It contributes to the regulation of body size and body fat accumulation as well []. This domain is the catalytic AlkB-like domain from the FTO protein []. This domain catalyses a demethylase activity with a preference for 3-methylthymidine.; PDB: 3LFM_A.
Probab=95.08 E-value=0.024 Score=55.66 Aligned_cols=91 Identities=21% Similarity=0.187 Sum_probs=49.4
Q ss_pred CCCeEEEeecCC--C---------------CCCcCCCCCCCccCCeEEEEecCCC----e--EEEEEecCCCCeEEEEEe
Q psy941 203 PIQYVHVLDLEQ--K---------------GYIKAHVDSVRFCGNTIAGLSLLSD----S--VMKLVDEKTKTQEILVLL 259 (487)
Q Consensus 203 ~~d~~lVN~Y~p--g---------------~gI~~H~D~~~~~g~~IaslSLGs~----~--vm~F~~~~~~~~~~~v~L 259 (487)
.+|-+|||+++| . -.++||.|.--.-..+||.-|--.+ . -.-|+.-....+...|+|
T Consensus 137 ~fNvTLlN~MdP~~~~~~~LK~Ep~fgmGKmaVsWH~DenL~~~StVAVY~~s~~~~~~~~W~VgLka~D~~tP~L~vPL 216 (253)
T PF12933_consen 137 EFNVTLLNYMDPSSQAMPDLKEEPYFGMGKMAVSWHHDENLVERSTVAVYSYSCEEPEPADWHVGLKAWDIETPGLAVPL 216 (253)
T ss_dssp ---EEEEEEE-S--S-SSS--B-SSS---BEEEEEE---SB-TT--EEEEEEE-----TTSEEEEEETT--SS-EEEEEE
T ss_pred eeehhhhhccCcccccccccccccccCCcceeeeeccccccccccceEEEEecCCCCCCCceEEEEeecCCCCCeeEEec
Confidence 489999999998 1 1567899863222235554443221 1 122342223457899999
Q ss_pred cCCcEEeecccccccccccccccccCCCCCcccc-cCccc
Q psy941 260 KQRSLYVMKDDARYKFTHEVLENEKSYFGDLRFK-TFPLI 298 (487)
Q Consensus 260 ~~gSLlVm~G~aRy~w~H~Ip~~~~d~~~g~RIs-TfR~~ 298 (487)
++|++|.|-++-....+|+|..- ...|+| |-|..
T Consensus 217 ~sgd~Y~Mldd~N~tHqH~VlaG-----~~~RfSSTHRVA 251 (253)
T PF12933_consen 217 RSGDCYYMLDDFNATHQHCVLAG-----SSARFSSTHRVA 251 (253)
T ss_dssp -TT-EEEE-TTHHHHEEEEEE-------SS-EEEEEEE-B
T ss_pred cCCCeEEEccccchhhHHHHhcC-----CCccccccceee
Confidence 99999999999999999999984 346999 98864
No 26
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A ....
Probab=94.54 E-value=0.007 Score=50.90 Aligned_cols=80 Identities=16% Similarity=0.171 Sum_probs=47.7
Q ss_pred EEEeecCCCCCCcCCCCCCCccCCeEEEE--ecCC------CeEEEEEecC-CCCeEEEEE-----ecCCcEEeeccccc
Q psy941 207 VHVLDLEQKGYIKAHVDSVRFCGNTIAGL--SLLS------DSVMKLVDEK-TKTQEILVL-----LKQRSLYVMKDDAR 272 (487)
Q Consensus 207 ~lVN~Y~pg~gI~~H~D~~~~~g~~Iasl--SLGs------~~vm~F~~~~-~~~~~~~v~-----L~~gSLlVm~G~aR 272 (487)
|-++.|.+|+.+.||.|... ....++++ -|.+ .-.+.|.... .......+. ...|+++++.+ .
T Consensus 1 ~~~~~y~~G~~~~~H~D~~~-~~~~~~t~llyL~~~~~~~~GG~l~~~~~~~~~~~~~~~~~~~~~p~~g~~v~F~~--~ 77 (100)
T PF13640_consen 1 MQLNRYPPGGFFGPHTDNSY-DPHRRVTLLLYLNDPEWEFEGGELEFYPSKDSDDVSREVEDFDIVPKPGRLVIFPS--D 77 (100)
T ss_dssp -EEEEEETTEEEEEEESSSC-CCSEEEEEEEESS-CS-HCEE--EEETTTS-TSSTCEEEGGGSEE-BTTEEEEEES--C
T ss_pred CEEEEECcCCEEeeeECCCC-CCcceEEEEEEECCCCcccCCCEEEEeccccCCCcceEEEeccccCCCCEEEEEeC--C
Confidence 45799999999999999842 11222222 2442 2356665432 112233333 88999999999 4
Q ss_pred ccccccccccccCCCCCcccc
Q psy941 273 YKFTHEVLENEKSYFGDLRFK 293 (487)
Q Consensus 273 y~w~H~Ip~~~~d~~~g~RIs 293 (487)
..| |++.+.. ..++|++
T Consensus 78 ~~~-H~v~~v~---~~~~R~~ 94 (100)
T PF13640_consen 78 NSL-HGVTPVG---EGGRRYS 94 (100)
T ss_dssp TCE-EEEEEE----EESEEEE
T ss_pred CCe-ecCcccC---CCCCEEE
Confidence 445 9999972 3677877
No 27
>PLN00052 prolyl 4-hydroxylase; Provisional
Probab=94.17 E-value=0.26 Score=50.76 Aligned_cols=96 Identities=21% Similarity=0.292 Sum_probs=57.7
Q ss_pred ccccceeecCCCCCHHHHHHHHHHHHHHhhcccc-cccCCCcCCCCccccc---cCch-hhhHHHHHHHHHhhcCCCCCC
Q psy941 324 SILSNMLVINDFLSAEEEQSLLKEINQFIKRQRY-EYDHWDDAIHGFRETE---RSKW-NEENTKIIARVQNLAFPPNVT 398 (487)
Q Consensus 324 ~~~~Gl~~~pdfis~~Ee~~Ll~~l~~~l~rrry-~~~~w~~~~~~y~~~~---~~pw-p~~l~~ll~rl~~~~~~~~~~ 398 (487)
+.-|-+.+++||||++|.+.|++.....+.+... .........+.+|... .... -+....|.+|+.+..+.+- .
T Consensus 51 S~~P~i~~~~nfLs~~Ecd~Li~la~~~l~~S~v~~~~~g~~~~s~~RTS~~~~l~~~~dpvv~~I~~Ria~~t~lp~-~ 129 (310)
T PLN00052 51 SWQPRIFVYKGFLSDAECDHLVKLAKKKIQRSMVADNKSGKSVMSEVRTSSGMFLDKRQDPVVSRIEERIAAWTFLPE-E 129 (310)
T ss_pred cCCCCEEEECCcCCHHHHHHHHHhcccccccceeecCCCCccccCCCEEecceeecCCCCHHHHHHHHHHHHHhCCCc-c
Confidence 4467899999999999999999887765543321 1010111112222211 1111 1245667777777654321 1
Q ss_pred CCCeEEEeccCCCCCcccCCCC
Q psy941 399 PIQYVHVLDLEQKGYIKAHVDS 420 (487)
Q Consensus 399 ~~n~~liN~Y~pG~gI~~H~D~ 420 (487)
.-..+-|..|.+|+...+|.|-
T Consensus 130 ~~E~lQVlrY~~Gq~Y~~H~D~ 151 (310)
T PLN00052 130 NAENIQILRYEHGQKYEPHFDY 151 (310)
T ss_pred cCcceEEEecCCCCCCCCCCCc
Confidence 2346778899999999999995
No 28
>PF12933 FTO_NTD: FTO catalytic domain; InterPro: IPR024367 Alpha-ketoglutarate-dependent dioxygenase FTO, also known as Fat mass and obesity-associated protein, is a nucleus protein which belongs to the FTO family. This enzyme is a dioxygenase that repairs alkylated DNA and RNA by oxidative demethylation []. FTO activity is highest towards single-stranded RNA containing 3-methyluracil, followed by single-stranded DNA containing 3-methylthymine. FTO has low demethylase activity towards single-stranded DNA containing 1-methyladenine or 3-methylcytosine []. FTO has no activity towards 1-methylguanine. It has no detectable activity towards double-stranded DNA. FTO requires molecular oxygen, alpha-ketoglutarate and iron. FTO contributes to the regulation of the global metabolic rate, energy expenditure and energy homeostasis. It contributes to the regulation of body size and body fat accumulation as well []. This domain is the catalytic AlkB-like domain from the FTO protein []. This domain catalyses a demethylase activity with a preference for 3-methylthymidine.; PDB: 3LFM_A.
Probab=90.23 E-value=0.43 Score=47.06 Aligned_cols=84 Identities=20% Similarity=0.136 Sum_probs=43.8
Q ss_pred CCCeEEEeccCC--------------C---CCcccCCCCCcccCCceEEEecCCce------EEEEEecCCCCeEEEEEe
Q psy941 399 PIQYVHVLDLEQ--------------K---GYIKAHVDSVRFCGNTIAGLSLLSDS------VMKLVDEKTKTQEILVLL 455 (487)
Q Consensus 399 ~~n~~liN~Y~p--------------G---~gI~~H~D~~~~~g~~IaslSLGs~~------vm~F~~~~~~~~~~~v~L 455 (487)
.||-+|||++.| | -.++||.|.--.-..+||.-|--.+. -.-|+.-....+.+.+.|
T Consensus 137 ~fNvTLlN~MdP~~~~~~~LK~Ep~fgmGKmaVsWH~DenL~~~StVAVY~~s~~~~~~~~W~VgLka~D~~tP~L~vPL 216 (253)
T PF12933_consen 137 EFNVTLLNYMDPSSQAMPDLKEEPYFGMGKMAVSWHHDENLVERSTVAVYSYSCEEPEPADWHVGLKAWDIETPGLAVPL 216 (253)
T ss_dssp ---EEEEEEE-S--S-SSS--B-SSS---BEEEEEE---SB-TT--EEEEEEE-----TTSEEEEEETT--SS-EEEEEE
T ss_pred eeehhhhhccCcccccccccccccccCCcceeeeeccccccccccceEEEEecCCCCCCCceEEEEeecCCCCCeeEEec
Confidence 599999999998 1 13679999733222366666544321 123342222346889999
Q ss_pred CCCcEEEeccccccccccccccCCccc
Q psy941 456 KQRSLYVMKDDARYKFTHEVLENESLD 482 (487)
Q Consensus 456 ~~rSLlvmsG~aRy~w~HgI~~~~~~~ 482 (487)
++|++|.|-++--.+-+|++..-..-+
T Consensus 217 ~sgd~Y~Mldd~N~tHqH~VlaG~~~R 243 (253)
T PF12933_consen 217 RSGDCYYMLDDFNATHQHCVLAGSSAR 243 (253)
T ss_dssp -TT-EEEE-TTHHHHEEEEEE--SS-E
T ss_pred cCCCeEEEccccchhhHHHHhcCCCcc
Confidence 999999999999999999987655444
No 29
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A ....
Probab=90.15 E-value=0.089 Score=44.10 Aligned_cols=73 Identities=15% Similarity=0.094 Sum_probs=41.9
Q ss_pred EEEeccCCCCCcccCCCCCcccCCce-EEEecCC------ceEEEEEecC-CCCeEEEEE-----eCCCcEEEecccccc
Q psy941 403 VHVLDLEQKGYIKAHVDSVRFCGNTI-AGLSLLS------DSVMKLVDEK-TKTQEILVL-----LKQRSLYVMKDDARY 469 (487)
Q Consensus 403 ~liN~Y~pG~gI~~H~D~~~~~g~~I-aslSLGs------~~vm~F~~~~-~~~~~~~v~-----L~~rSLlvmsG~aRy 469 (487)
|-++.|.+|+.++||.|....-+..+ +.+-|.. .-.+.|.... .......+. ..+|+++++.+ .
T Consensus 1 ~~~~~y~~G~~~~~H~D~~~~~~~~~t~llyL~~~~~~~~GG~l~~~~~~~~~~~~~~~~~~~~~p~~g~~v~F~~---~ 77 (100)
T PF13640_consen 1 MQLNRYPPGGFFGPHTDNSYDPHRRVTLLLYLNDPEWEFEGGELEFYPSKDSDDVSREVEDFDIVPKPGRLVIFPS---D 77 (100)
T ss_dssp -EEEEEETTEEEEEEESSSCCCSEEEEEEEESS-CS-HCEE--EEETTTS-TSSTCEEEGGGSEE-BTTEEEEEES---C
T ss_pred CEEEEECcCCEEeeeECCCCCCcceEEEEEEECCCCcccCCCEEEEeccccCCCcceEEEeccccCCCCEEEEEeC---C
Confidence 45799999999999999932111111 1222441 2345555432 112233333 88999999999 4
Q ss_pred ccccccccC
Q psy941 470 KFTHEVLEN 478 (487)
Q Consensus 470 ~w~HgI~~~ 478 (487)
...|++.+.
T Consensus 78 ~~~H~v~~v 86 (100)
T PF13640_consen 78 NSLHGVTPV 86 (100)
T ss_dssp TCEEEEEEE
T ss_pred CCeecCccc
Confidence 444998877
No 30
>PF09859 Oxygenase-NA: Oxygenase, catalysing oxidative methylation of damaged DNA; InterPro: IPR018655 This family of various hypothetical prokaryotic proteins, has no known function.
Probab=89.89 E-value=1.1 Score=41.93 Aligned_cols=95 Identities=17% Similarity=0.196 Sum_probs=62.4
Q ss_pred CCchhhHHHHHHHHhhcCCCCCCCCCeEEEeecCCCCCCcCCCCCCCccCC------eEEEEe------cCCCeEEEEEe
Q psy941 180 KWNEENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKAHVDSVRFCGN------TIAGLS------LLSDSVMKLVD 247 (487)
Q Consensus 180 ~w~~~~~~i~~rl~~~~~~~~~~~~d~~lVN~Y~pg~gI~~H~D~~~~~g~------~IaslS------LGs~~vm~F~~ 247 (487)
.||..+.+.+++..+.. + ..| ..+++.|.+|+...-|+|- +|+ .|+-|| -|.+=||.=-.
T Consensus 42 ~yP~~~~~fl~~ch~aG--Q--~rp-tplllrY~~gdyn~LHqdl---yGe~vFPlQvv~lLs~Pg~DftGGEFVltEQr 113 (173)
T PF09859_consen 42 RYPATLAEFLARCHAAG--Q--TRP-TPLLLRYGPGDYNCLHQDL---YGEHVFPLQVVILLSEPGEDFTGGEFVLTEQR 113 (173)
T ss_pred CCCccHHHHHHHHHhcc--C--CCC-chhhheeCCCCccccccCC---CCCcccCeEEEEEcCCCCCcccCceEEEEEec
Confidence 58888888888887642 2 223 4667999999999999996 344 444444 23333333322
Q ss_pred cCCCCeEEEEEecCCcEEeec----------cccccccccccccc
Q psy941 248 EKTKTQEILVLLKQRSLYVMK----------DDARYKFTHEVLEN 282 (487)
Q Consensus 248 ~~~~~~~~~v~L~~gSLlVm~----------G~aRy~w~H~Ip~~ 282 (487)
..-.++..-+.|..|+.+|+. |.-|-.-+|||-..
T Consensus 114 PR~QSR~~V~~L~qGda~if~t~~RPv~G~rG~yRv~~RHgVS~v 158 (173)
T PF09859_consen 114 PRMQSRAMVLPLRQGDALIFATNHRPVRGARGYYRVNMRHGVSRV 158 (173)
T ss_pred CCccCccccCCcCCCCEEEEecCCCCcCCCccceecccccccccc
Confidence 222345778999999999996 34455556777665
No 31
>TIGR01762 chlorin-enz chlorinating enzymes. This model represents a a group of highly homologous enzymes related to dioxygenases which chlorinate amino acid methyl groups. BarB1 and BarB2 are proposed to trichlorinate one of the methyl groups of a leucine residue in the biosynthesis of barbamide in the cyanobacterium Lyngbya majuscula. SyrB2 is proposed to chlorinate the methyl group of threonine in the biosynthesis of syringomycin in Pseudomonas syringae. CmaB is proposed to chlorinate the beta-methyl group of alloisoleucine in the process of ring closure in the biosynthesis of coronamic acid, a component of coronatine also in Pseudomonas syringae.
Probab=89.44 E-value=4.4 Score=41.23 Aligned_cols=41 Identities=12% Similarity=0.190 Sum_probs=30.4
Q ss_pred EEEEEecCCcEEeecccccccccccccccccCCCCCcccc-cCccccc
Q psy941 254 EILVLLKQRSLYVMKDDARYKFTHEVLENEKSYFGDLRFK-TFPLIHS 300 (487)
Q Consensus 254 ~~~v~L~~gSLlVm~G~aRy~w~H~Ip~~~~d~~~g~RIs-TfR~~~~ 300 (487)
.+.+.|++|++++|.+-+ | |+-.+... ...+|+. ++|-+..
T Consensus 208 ~v~~~lkaGd~~~f~~~t---~-HgS~~N~S--~~~~R~~~~~ry~~~ 249 (288)
T TIGR01762 208 AVPMQMKAGQFIIFWSTL---M-HASYPNSG--ESQMRMGFASRYVPS 249 (288)
T ss_pred eeeeeeCCceEEEECCCc---e-ecCCCCCC--CCceEEEEEEEEcCC
Confidence 568889999999998865 4 77666542 2346888 9998865
No 32
>COG3128 PiuC Uncharacterized iron-regulated protein [Function unknown]
Probab=88.99 E-value=2.1 Score=40.76 Aligned_cols=70 Identities=17% Similarity=0.106 Sum_probs=43.7
Q ss_pred EEeccCCCCCcccCCCCCccc-CC--ceEEEecCCceEEEEEecCC----------CCeEEEEEeCCCcEEEeccccccc
Q psy941 404 HVLDLEQKGYIKAHVDSVRFC-GN--TIAGLSLLSDSVMKLVDEKT----------KTQEILVLLKQRSLYVMKDDARYK 470 (487)
Q Consensus 404 liN~Y~pG~gI~~H~D~~~~~-g~--~IaslSLGs~~vm~F~~~~~----------~~~~~~v~L~~rSLlvmsG~aRy~ 470 (487)
+.|.|+.|+..++|+|+--.. .+ .. .++--=+|++.+..+++ ......|.||.|||++.-+++
T Consensus 85 ~Fn~Y~eg~~f~fHvDgavr~~hp~~~~-~lrtdls~tlfl~DPedYdGGeLVv~dtYg~h~VklPAGdLVlypStS--- 160 (229)
T COG3128 85 LFNRYQEGDFFGFHVDGAVRSIHPGSGF-RLRTDLSCTLFLSDPEDYDGGELVVNDTYGNHRVKLPAGDLVLYPSTS--- 160 (229)
T ss_pred hhhhccCCCcccccccCcccccCCCCCc-eeEeeeeeeeecCCccccCCceEEEeccccceEEeccCCCEEEccccc---
Confidence 348999999999999984322 11 11 22222234555544431 123678999999999998876
Q ss_pred cccccccC
Q psy941 471 FTHEVLEN 478 (487)
Q Consensus 471 w~HgI~~~ 478 (487)
.|.+.+.
T Consensus 161 -lH~VtPV 167 (229)
T COG3128 161 -LHEVTPV 167 (229)
T ss_pred -ceecccc
Confidence 4555543
No 33
>KOG1591|consensus
Probab=85.56 E-value=4.5 Score=41.32 Aligned_cols=133 Identities=21% Similarity=0.211 Sum_probs=78.1
Q ss_pred cccCCCeEEEcCCCCHHHHHHHHHHHHHHhhcccc-ccCC-CCcCCCCcccccCCCCchh-----hHHHHHHHHhhcCCC
Q psy941 127 SSILSNMLVINDFLSAEEEQSLLKEINQFIKRQRY-EYDH-WDDAIHGFRETERSKWNEE-----NTKIIARVQNLAFPP 199 (487)
Q Consensus 127 ~~~~~Gl~~ipdfls~~Ee~~Ll~~i~~~l~rrry-~~~~-w~~~i~g~r~~~~~~w~~~-----~~~i~~rl~~~~~~~ 199 (487)
...-|.+.+++|||+.+|.+.|+..-...|.+.+- .... .....+.+|... ..|.+. +..|-+|+......
T Consensus 93 lsw~P~~~~yhd~ls~~e~d~l~~lak~~l~~stv~~~~~~~~~~~~~~R~S~-~t~l~~~~~~~~~~i~~ri~~~T~l- 170 (289)
T KOG1591|consen 93 LSWDPRVVLYHDFLSDEECDHLISLAKPKLERSTVVADKGTGHSTTSAVRTSS-GTFLPDGASPVVSRIEQRIADLTGL- 170 (289)
T ss_pred cccCCceEeehhcCCHHHHHHHHHhhhhhhhceeeeccCCcccccceeeEecc-eeEecCCCCHHHHHHHHHHHhccCC-
Confidence 34568899999999999999999988877766652 1111 111112233321 223322 33444455443211
Q ss_pred CCCCCCeEEEeecCCCCCCcCCCCCC---Cc-------cCCeEEEEecCCCeEEEEEecCCCC------eEE--EEEecC
Q psy941 200 NVTPIQYVHVLDLEQKGYIKAHVDSV---RF-------CGNTIAGLSLLSDSVMKLVDEKTKT------QEI--LVLLKQ 261 (487)
Q Consensus 200 ~~~~~d~~lVN~Y~pg~gI~~H~D~~---~~-------~g~~IaslSLGs~~vm~F~~~~~~~------~~~--~v~L~~ 261 (487)
....-...-|..|..|+.-.+|.|-- .. .|..||++ .|.+...+..+ ... .|....
T Consensus 171 ~~e~~E~lqVlnYg~Gg~Y~~H~D~~~~~~~~~~~~~~~g~RiaT~------l~yls~v~~GG~TvFP~~~~~~~V~Pkk 244 (289)
T KOG1591|consen 171 PVENGESLQVLNYGLGGHYEPHYDYFLPEEDETFNGLNGGNRIATV------LMYLSDVEQGGETVFPNLGMKPAVKPKK 244 (289)
T ss_pred CcccCccceEEEecCCccccccccccccccchhhhhcccCCcceeE------EEEecccCCCCcccCCCCCCcccccCCC
Confidence 11234577788999999999998854 11 34555543 56665554322 123 677777
Q ss_pred CcEEee
Q psy941 262 RSLYVM 267 (487)
Q Consensus 262 gSLlVm 267 (487)
|+.+.+
T Consensus 245 Gdal~w 250 (289)
T KOG1591|consen 245 GDALFW 250 (289)
T ss_pred CCeeEE
Confidence 887765
No 34
>KOG1591|consensus
Probab=80.38 E-value=7.7 Score=39.65 Aligned_cols=134 Identities=22% Similarity=0.225 Sum_probs=76.0
Q ss_pred ccccccceeecCCCCCHHHHHHHHHHHHHHhhcccccccCCC--cCCCCccccccCchh-----hhHHHHHHHHHhhcCC
Q psy941 322 KSSILSNMLVINDFLSAEEEQSLLKEINQFIKRQRYEYDHWD--DAIHGFRETERSKWN-----EENTKIIARVQNLAFP 394 (487)
Q Consensus 322 ~~~~~~Gl~~~pdfis~~Ee~~Ll~~l~~~l~rrry~~~~w~--~~~~~y~~~~~~pwp-----~~l~~ll~rl~~~~~~ 394 (487)
....-|.+.+++|||+++|.+.|++.-...+++..-...... ...+.+|.. ..-|. .....|-+|+.+....
T Consensus 92 ~lsw~P~~~~yhd~ls~~e~d~l~~lak~~l~~stv~~~~~~~~~~~~~~R~S-~~t~l~~~~~~~~~~i~~ri~~~T~l 170 (289)
T KOG1591|consen 92 ELSWDPRVVLYHDFLSDEECDHLISLAKPKLERSTVVADKGTGHSTTSAVRTS-SGTFLPDGASPVVSRIEQRIADLTGL 170 (289)
T ss_pred hcccCCceEeehhcCCHHHHHHHHHhhhhhhhceeeeccCCcccccceeeEec-ceeEecCCCCHHHHHHHHHHHhccCC
Confidence 334567799999999999999999887665554421111100 000111111 11222 2233444555554432
Q ss_pred CCCCCCCeEEEeccCCCCCcccCCCCC---cc-------cCCceEEEecCCceEEEEEecCCCC------eEE--EEEeC
Q psy941 395 PNVTPIQYVHVLDLEQKGYIKAHVDSV---RF-------CGNTIAGLSLLSDSVMKLVDEKTKT------QEI--LVLLK 456 (487)
Q Consensus 395 ~~~~~~n~~liN~Y~pG~gI~~H~D~~---~~-------~g~~IaslSLGs~~vm~F~~~~~~~------~~~--~v~L~ 456 (487)
. ...-....|..|..|+.-.+|.|-- .. .|..||+ ..|.+.....++ ... .|...
T Consensus 171 ~-~e~~E~lqVlnYg~Gg~Y~~H~D~~~~~~~~~~~~~~~g~RiaT------~l~yls~v~~GG~TvFP~~~~~~~V~Pk 243 (289)
T KOG1591|consen 171 P-VENGESLQVLNYGLGGHYEPHYDYFLPEEDETFNGLNGGNRIAT------VLMYLSDVEQGGETVFPNLGMKPAVKPK 243 (289)
T ss_pred C-cccCccceEEEecCCccccccccccccccchhhhhcccCCccee------EEEEecccCCCCcccCCCCCCcccccCC
Confidence 1 1234577888999999999998863 21 4456654 466666654322 223 67777
Q ss_pred CCcEEEe
Q psy941 457 QRSLYVM 463 (487)
Q Consensus 457 ~rSLlvm 463 (487)
.|+.+..
T Consensus 244 kGdal~w 250 (289)
T KOG1591|consen 244 KGDALFW 250 (289)
T ss_pred CCCeeEE
Confidence 7777765
No 35
>PF09859 Oxygenase-NA: Oxygenase, catalysing oxidative methylation of damaged DNA; InterPro: IPR018655 This family of various hypothetical prokaryotic proteins, has no known function.
Probab=78.94 E-value=5.4 Score=37.30 Aligned_cols=99 Identities=14% Similarity=0.143 Sum_probs=64.2
Q ss_pred CchhhhHHHHHHHHHhhcCCCCCCCCCeEEEeccCCCCCcccCCCCC--cccC-CceEEEec------CCceEEEEEecC
Q psy941 375 SKWNEENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKAHVDSV--RFCG-NTIAGLSL------LSDSVMKLVDEK 445 (487)
Q Consensus 375 ~pwp~~l~~ll~rl~~~~~~~~~~~~n~~liN~Y~pG~gI~~H~D~~--~~~g-~~IaslSL------Gs~~vm~F~~~~ 445 (487)
..||..+.+++++..+..- .-...+++.|.+|+....|.|-- ..|- ..|+.||= |.+=+|+=.+.+
T Consensus 41 ~~yP~~~~~fl~~ch~aGQ-----~rptplllrY~~gdyn~LHqdlyGe~vFPlQvv~lLs~Pg~DftGGEFVltEQrPR 115 (173)
T PF09859_consen 41 ARYPATLAEFLARCHAAGQ-----TRPTPLLLRYGPGDYNCLHQDLYGEHVFPLQVVILLSEPGEDFTGGEFVLTEQRPR 115 (173)
T ss_pred CCCCccHHHHHHHHHhccC-----CCCchhhheeCCCCccccccCCCCCcccCeEEEEEcCCCCCcccCceEEEEEecCC
Confidence 3688888888888876431 22356789999999999999962 2221 14444542 333344433333
Q ss_pred CCCeEEEEEeCCCcEEEec----------cccccccccccccC
Q psy941 446 TKTQEILVLLKQRSLYVMK----------DDARYKFTHEVLEN 478 (487)
Q Consensus 446 ~~~~~~~v~L~~rSLlvms----------G~aRy~w~HgI~~~ 478 (487)
......-+.|..|+.+|+. |.-|-.-+|||...
T Consensus 116 ~QSR~~V~~L~qGda~if~t~~RPv~G~rG~yRv~~RHgVS~v 158 (173)
T PF09859_consen 116 MQSRAMVLPLRQGDALIFATNHRPVRGARGYYRVNMRHGVSRV 158 (173)
T ss_pred ccCccccCCcCCCCEEEEecCCCCcCCCccceecccccccccc
Confidence 2234567889999999985 55667777887654
No 36
>TIGR01762 chlorin-enz chlorinating enzymes. This model represents a a group of highly homologous enzymes related to dioxygenases which chlorinate amino acid methyl groups. BarB1 and BarB2 are proposed to trichlorinate one of the methyl groups of a leucine residue in the biosynthesis of barbamide in the cyanobacterium Lyngbya majuscula. SyrB2 is proposed to chlorinate the methyl group of threonine in the biosynthesis of syringomycin in Pseudomonas syringae. CmaB is proposed to chlorinate the beta-methyl group of alloisoleucine in the process of ring closure in the biosynthesis of coronamic acid, a component of coronatine also in Pseudomonas syringae.
Probab=63.28 E-value=27 Score=35.49 Aligned_cols=27 Identities=19% Similarity=0.124 Sum_probs=23.7
Q ss_pred ccceeecCCCCCHHHHHHHHHHHHHHh
Q psy941 326 LSNMLVINDFLSAEEEQSLLKEINQFI 352 (487)
Q Consensus 326 ~~Gl~~~pdfis~~Ee~~Ll~~l~~~l 352 (487)
-.|..+++++|+++|-+.|.++++..+
T Consensus 13 e~Gyv~~~~~~s~eei~~L~~~~~~~l 39 (288)
T TIGR01762 13 KNGFIGPFTLYSPEEMKETWKRIRLRL 39 (288)
T ss_pred hCCEEeCcCCCCHHHHHHHHHHHHHHh
Confidence 469999999999999999999987644
No 37
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro []. Interestingly TET2 is considered as an oncogene, as it is found mutated in some types of cancer []. This entry represents the double-stranded beta helix (DSBH) fold of the 2-oxoglutarate (2OG) - Fe(II) oxygenases. DSBH comprises a part of the catalytic domain in TETS. It is found in many organisms including fruit fly, African malaria mosquito, zebrafish, mouse and human.
Probab=46.80 E-value=52 Score=30.84 Aligned_cols=86 Identities=13% Similarity=0.135 Sum_probs=52.7
Q ss_pred CCeEEEeecCCCCCCcCCCCCCCccCC--eEEEEecC--CCeEEEEEecCCCCeEEEEEecCCcEEeecccccccccccc
Q psy941 204 IQYVHVLDLEQKGYIKAHVDSVRFCGN--TIAGLSLL--SDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTHEV 279 (487)
Q Consensus 204 ~d~~lVN~Y~pg~gI~~H~D~~~~~g~--~IaslSLG--s~~vm~F~~~~~~~~~~~v~L~~gSLlVm~G~aRy~w~H~I 279 (487)
|..+.|+ -+-....|.|....-.. .++.+--| +...+.+-.....-.-+.|.+.+||++++.|. .+.|++
T Consensus 76 Fs~~sv~---~nr~t~~HrD~~~~~~~~~~~~t~~~gd~~~g~l~lp~~~~~~~g~~~~~~~GtVl~~~~~---~~~Hgv 149 (171)
T PF12851_consen 76 FSGVSVI---SNRCTHSHRDTHNMPNGYDVLCTLGRGDYDGGRLELPGLDPNILGVAFAYQPGTVLIFCAK---RELHGV 149 (171)
T ss_pred eeceEEE---eecCccceecCCCCCCCeEEEEecCCccccCceEeccccccccCCEEEecCCCcEEEEccc---ceeeec
Confidence 5555544 23457889998653222 33333333 34555554411111358899999999999875 467999
Q ss_pred ccccc-CCCCCcccc-cC
Q psy941 280 LENEK-SYFGDLRFK-TF 295 (487)
Q Consensus 280 p~~~~-d~~~g~RIs-Tf 295 (487)
.+.+. +...+.||+ .|
T Consensus 150 tpv~~~~~~~~~R~slvf 167 (171)
T PF12851_consen 150 TPVESPNRNHGTRISLVF 167 (171)
T ss_pred CcccCCCCCCCeEEEEEE
Confidence 99763 234588998 54
No 38
>PF08007 Cupin_4: Cupin superfamily protein; InterPro: IPR022777 This signature represents primarily the cupin fold found in JmjC transcription factors. The fold is also found in lysine-specific demethylase NO66.; PDB: 2XDV_A 1VRB_B 4DIQ_B.
Probab=45.18 E-value=31 Score=35.55 Aligned_cols=58 Identities=16% Similarity=0.049 Sum_probs=37.5
Q ss_pred eEEEeecC-CCC--CCcCCCCCCCccCCeEEEEecCCCeEEEEEecCC----------------CCeEEEEEecCCcEEe
Q psy941 206 YVHVLDLE-QKG--YIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKT----------------KTQEILVLLKQRSLYV 266 (487)
Q Consensus 206 ~~lVN~Y~-pg~--gI~~H~D~~~~~g~~IaslSLGs~~vm~F~~~~~----------------~~~~~~v~L~~gSLlV 266 (487)
.|-+|.|- |++ |.++|.|... |..|=+.+....++..... .....++.|++|++|.
T Consensus 113 ~~~~n~Y~tp~g~~g~~~H~D~~d-----vfvlQ~~G~K~W~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~pGD~LY 187 (319)
T PF08007_consen 113 PVGANAYLTPPGSQGFGPHYDDHD-----VFVLQLEGRKRWRLYPPPDEPAPLYSDQPFKQLEEFEPVEEVVLEPGDVLY 187 (319)
T ss_dssp -EEEEEEEETSSBEESECEE-SSE-----EEEEEEES-EEEEEE-SCCCTTTSSCE--TTTCG--STSEEEEE-TT-EEE
T ss_pred ccceEEEecCCCCCCccCEECCcc-----cEEEECCceeEEEECCCCcccccccCCCCccccccCceeEEEEECCCCEEE
Confidence 58889998 444 9999999864 5557777788888877311 0236789999999987
Q ss_pred ec
Q psy941 267 MK 268 (487)
Q Consensus 267 m~ 268 (487)
+=
T Consensus 188 lP 189 (319)
T PF08007_consen 188 LP 189 (319)
T ss_dssp E-
T ss_pred EC
Confidence 75
No 39
>TIGR02408 ectoine_ThpD ectoine hydroxylase. Both ectoine and hydroxyectoine are compatible solvents that serve as protectants against osmotic and thermal stresses. A number of genomes synthesize ectoine. This enzyme allows conversion of ectoine to hydroxyectoine, which may be more effective for some purposes, and is found in a subset of ectoine-producing organisms.
Probab=42.09 E-value=95 Score=31.18 Aligned_cols=28 Identities=21% Similarity=0.520 Sum_probs=24.8
Q ss_pred ccceeecCCCCCHHHHHHHHHHHHHHhh
Q psy941 326 LSNMLVINDFLSAEEEQSLLKEINQFIK 353 (487)
Q Consensus 326 ~~Gl~~~pdfis~~Ee~~Ll~~l~~~l~ 353 (487)
-.|..+++++|+++|-+.|.++++..+.
T Consensus 27 ~dGyvvl~~vls~eev~~lr~~i~~~~~ 54 (277)
T TIGR02408 27 RDGFLLLENLFSDDEVAALLAEVERMTR 54 (277)
T ss_pred HCCEEECcccCCHHHHHHHHHHHHHHHh
Confidence 4699999999999999999999988653
No 40
>KOG0143|consensus
Probab=41.83 E-value=74 Score=32.94 Aligned_cols=68 Identities=12% Similarity=-0.045 Sum_probs=44.4
Q ss_pred eEEEeecCC------CCCCcCCCCCCCccCCeEEEEecC-CCeEEEEEecCCCCeEEEEEecCCcEEeeccccccccccc
Q psy941 206 YVHVLDLEQ------KGYIKAHVDSVRFCGNTIAGLSLL-SDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTHE 278 (487)
Q Consensus 206 ~~lVN~Y~p------g~gI~~H~D~~~~~g~~IaslSLG-s~~vm~F~~~~~~~~~~~v~L~~gSLlVm~G~aRy~w~H~ 278 (487)
.+-+|+|.+ .-|+++|.|.. .|.+|--- .-.=+.+..+ .+.|++|.--+++++|.-|+.=..|.=|
T Consensus 177 ~~r~n~Yp~cp~pe~~lGl~~HtD~~-----~lTiLlqd~~V~GLQv~~~--dg~Wi~V~P~p~a~vVNiGD~l~~lSNG 249 (322)
T KOG0143|consen 177 VMRLNYYPPCPEPELTLGLGAHTDKS-----FLTILLQDDDVGGLQVFTK--DGKWIDVPPIPGAFVVNIGDMLQILSNG 249 (322)
T ss_pred EEEEeecCCCcCccccccccCccCcC-----ceEEEEccCCcCceEEEec--CCeEEECCCCCCCEEEEcccHHhHhhCC
Confidence 677899997 12999999963 12222211 1111222222 3579999999999999999988877655
Q ss_pred cc
Q psy941 279 VL 280 (487)
Q Consensus 279 Ip 280 (487)
.-
T Consensus 250 ~y 251 (322)
T KOG0143|consen 250 RY 251 (322)
T ss_pred cc
Confidence 33
No 41
>PF08007 Cupin_4: Cupin superfamily protein; InterPro: IPR022777 This signature represents primarily the cupin fold found in JmjC transcription factors. The fold is also found in lysine-specific demethylase NO66.; PDB: 2XDV_A 1VRB_B 4DIQ_B.
Probab=37.48 E-value=45 Score=34.33 Aligned_cols=58 Identities=16% Similarity=0.051 Sum_probs=37.4
Q ss_pred eEEEeccC-CCC--CcccCCCCCcccCCceEEEecCCceEEEEEecCC----------------CCeEEEEEeCCCcEEE
Q psy941 402 YVHVLDLE-QKG--YIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKT----------------KTQEILVLLKQRSLYV 462 (487)
Q Consensus 402 ~~liN~Y~-pG~--gI~~H~D~~~~~g~~IaslSLGs~~vm~F~~~~~----------------~~~~~~v~L~~rSLlv 462 (487)
.|-+|-|- |++ |+++|.|.. -|..|=+.+...+++..... .....++.|.+|++|-
T Consensus 113 ~~~~n~Y~tp~g~~g~~~H~D~~-----dvfvlQ~~G~K~W~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~pGD~LY 187 (319)
T PF08007_consen 113 PVGANAYLTPPGSQGFGPHYDDH-----DVFVLQLEGRKRWRLYPPPDEPAPLYSDQPFKQLEEFEPVEEVVLEPGDVLY 187 (319)
T ss_dssp -EEEEEEEETSSBEESECEE-SS-----EEEEEEEES-EEEEEE-SCCCTTTSSCE--TTTCG--STSEEEEE-TT-EEE
T ss_pred ccceEEEecCCCCCCccCEECCc-----ccEEEECCceeEEEECCCCcccccccCCCCccccccCceeEEEEECCCCEEE
Confidence 68889998 444 999999986 34467778888888887310 0236689999999987
Q ss_pred ec
Q psy941 463 MK 464 (487)
Q Consensus 463 ms 464 (487)
+=
T Consensus 188 lP 189 (319)
T PF08007_consen 188 LP 189 (319)
T ss_dssp E-
T ss_pred EC
Confidence 74
No 42
>TIGR02408 ectoine_ThpD ectoine hydroxylase. Both ectoine and hydroxyectoine are compatible solvents that serve as protectants against osmotic and thermal stresses. A number of genomes synthesize ectoine. This enzyme allows conversion of ectoine to hydroxyectoine, which may be more effective for some purposes, and is found in a subset of ectoine-producing organisms.
Probab=36.09 E-value=1.3e+02 Score=30.11 Aligned_cols=28 Identities=21% Similarity=0.520 Sum_probs=24.7
Q ss_pred CCCeEEEcCCCCHHHHHHHHHHHHHHhh
Q psy941 130 LSNMLVINDFLSAEEEQSLLKEINQFIK 157 (487)
Q Consensus 130 ~~Gl~~ipdfls~~Ee~~Ll~~i~~~l~ 157 (487)
-.|..+++++|+++|-+.|.+++++.+.
T Consensus 27 ~dGyvvl~~vls~eev~~lr~~i~~~~~ 54 (277)
T TIGR02408 27 RDGFLLLENLFSDDEVAALLAEVERMTR 54 (277)
T ss_pred HCCEEECcccCCHHHHHHHHHHHHHHHh
Confidence 3799999999999999999999987653
No 43
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=32.89 E-value=86 Score=31.42 Aligned_cols=68 Identities=13% Similarity=0.064 Sum_probs=44.2
Q ss_pred eEEEeecCC------CCCCcCCCCCCCccCCeEEEEecCCCeEEEEEecCCCCeEEEEEecCCcEEeecccccccccccc
Q psy941 206 YVHVLDLEQ------KGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTHEV 279 (487)
Q Consensus 206 ~~lVN~Y~p------g~gI~~H~D~~~~~g~~IaslSLGs~~vm~F~~~~~~~~~~~v~L~~gSLlVm~G~aRy~w~H~I 279 (487)
.+-+|+|.+ .-|+++|.|.. .|..|-=.+..=+.... .+.++.|.-.+|+++|.-|++=..|+.+.
T Consensus 117 ~lrl~~YP~~~~~~~~~g~~~HtD~g-----~lTlL~qd~v~GLqV~~---~g~Wi~V~p~p~a~vVNiGD~l~~~tng~ 188 (262)
T PLN03001 117 NITVSYYPPCPQPELTLGLQSHSDFG-----AITLLIQDDVEGLQLLK---DAEWLMVPPISDAILIIIADQTEIITNGN 188 (262)
T ss_pred hheeecCCCCCCcccccCCcCCcCCC-----eeEEEEeCCCCceEEee---CCeEEECCCCCCcEEEEccHHHHHHhCCc
Confidence 356788876 23889999952 23333211111123322 35799999999999999999988887554
Q ss_pred cc
Q psy941 280 LE 281 (487)
Q Consensus 280 p~ 281 (487)
-+
T Consensus 189 ~~ 190 (262)
T PLN03001 189 YK 190 (262)
T ss_pred cc
Confidence 43
No 44
>PLN02904 oxidoreductase
Probab=32.00 E-value=1e+02 Score=32.38 Aligned_cols=75 Identities=13% Similarity=0.029 Sum_probs=51.9
Q ss_pred eEEEeccCC-----C-CCcccCCCCCcccCCceEEEecCCceEEEEEecCCCCeEEEEEeCCCcEEEecccccccccccc
Q psy941 402 YVHVLDLEQ-----K-GYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTHEV 475 (487)
Q Consensus 402 ~~liN~Y~p-----G-~gI~~H~D~~~~~g~~IaslSLGs~~vm~F~~~~~~~~~~~v~L~~rSLlvmsG~aRy~w~HgI 475 (487)
.+.+|+|.+ . -|+++|.|.- .|..|- ....=+..... .++.+.|.-.+|+++|--|++=-.|+-|.
T Consensus 209 ~lrl~~YPp~p~~~~~~g~~~HtD~g-----~lTlL~-qd~~GLQV~~~--~g~Wi~V~p~pgalVVNiGD~Le~~TNG~ 280 (357)
T PLN02904 209 VMAVNCYPACPEPEIALGMPPHSDFG-----SLTILL-QSSQGLQIMDC--NKNWVCVPYIEGALIVQLGDQVEVMSNGI 280 (357)
T ss_pred EEEeeecCCCCCcccccCCcCccCCC-----ceEEEe-cCCCeeeEEeC--CCCEEECCCCCCeEEEEccHHHHHHhCCe
Confidence 466899986 1 3889999962 333332 12223444433 24689999999999999999998998777
Q ss_pred ccCCccccc
Q psy941 476 LENESLDCL 484 (487)
Q Consensus 476 ~~~~~~~~~ 484 (487)
-+....+++
T Consensus 281 ~kSt~HRVv 289 (357)
T PLN02904 281 YKSVVHRVT 289 (357)
T ss_pred eeccCCccc
Confidence 776666654
No 45
>PLN02904 oxidoreductase
Probab=31.64 E-value=98 Score=32.49 Aligned_cols=68 Identities=15% Similarity=0.067 Sum_probs=45.5
Q ss_pred eEEEeecCC------CCCCcCCCCCCCccCCeEEEEecCCCeEEEEEecCCCCeEEEEEecCCcEEeecccccccccccc
Q psy941 206 YVHVLDLEQ------KGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTHEV 279 (487)
Q Consensus 206 ~~lVN~Y~p------g~gI~~H~D~~~~~g~~IaslSLGs~~vm~F~~~~~~~~~~~v~L~~gSLlVm~G~aRy~w~H~I 279 (487)
.+-+|+|.+ .-|+++|.|.- .|..|- .+..=+..... .++++.|.-.+|+++|--|+.=..|+-|.
T Consensus 209 ~lrl~~YPp~p~~~~~~g~~~HtD~g-----~lTlL~-qd~~GLQV~~~--~g~Wi~V~p~pgalVVNiGD~Le~~TNG~ 280 (357)
T PLN02904 209 VMAVNCYPACPEPEIALGMPPHSDFG-----SLTILL-QSSQGLQIMDC--NKNWVCVPYIEGALIVQLGDQVEVMSNGI 280 (357)
T ss_pred EEEeeecCCCCCcccccCCcCccCCC-----ceEEEe-cCCCeeeEEeC--CCCEEECCCCCCeEEEEccHHHHHHhCCe
Confidence 567899986 23899999952 233332 12222344333 35799999999999999999888885544
Q ss_pred cc
Q psy941 280 LE 281 (487)
Q Consensus 280 p~ 281 (487)
-+
T Consensus 281 ~k 282 (357)
T PLN02904 281 YK 282 (357)
T ss_pred ee
Confidence 44
No 46
>PLN02156 gibberellin 2-beta-dioxygenase
Probab=31.00 E-value=1.2e+02 Score=31.60 Aligned_cols=78 Identities=13% Similarity=0.109 Sum_probs=51.7
Q ss_pred CeEEEeccCCC-------C-CcccCCCCCcccCCceEEEecCCceEEEEEecCCCCeEEEEEeCCCcEEEeccccccccc
Q psy941 401 QYVHVLDLEQK-------G-YIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFT 472 (487)
Q Consensus 401 n~~liN~Y~pG-------~-gI~~H~D~~~~~g~~IaslSLGs~~vm~F~~~~~~~~~~~v~L~~rSLlvmsG~aRy~w~ 472 (487)
..+.+|+|.+- . |+++|.|-- .|..|-=-+.-=+....+ .++.+.|.-.+|+++|--|++=..|+
T Consensus 178 ~~lRl~~YP~~~~~~~~~~~g~~~HTD~g-----~lTlL~Qd~v~GLQV~~~--~g~Wi~Vpp~pga~VVNiGD~l~~wT 250 (335)
T PLN02156 178 SCLRMNHYPEKEETPEKVEIGFGEHTDPQ-----LISLLRSNDTAGLQICVK--DGTWVDVPPDHSSFFVLVGDTLQVMT 250 (335)
T ss_pred ceEeEEeCCCCCCCccccccCCCCccCCC-----ceEEEEeCCCCceEEEeC--CCCEEEccCCCCcEEEEhHHHHHHHh
Confidence 35678999761 2 788999952 222221101111222222 24688999999999999999999999
Q ss_pred cccccCCcccccc
Q psy941 473 HEVLENESLDCLN 485 (487)
Q Consensus 473 HgI~~~~~~~~~~ 485 (487)
.|.-+....++++
T Consensus 251 Ng~~kSt~HRVv~ 263 (335)
T PLN02156 251 NGRFKSVKHRVVT 263 (335)
T ss_pred CCeeeccceeeec
Confidence 9888777777653
No 47
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=30.71 E-value=1.3e+02 Score=31.42 Aligned_cols=79 Identities=9% Similarity=0.045 Sum_probs=51.9
Q ss_pred CeEEEeccCCC------CCcccCCCCCcccCCceEEEecCCceEEEEEecCCCCeEEEEEeCCCcEEEeccccccccccc
Q psy941 401 QYVHVLDLEQK------GYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTHE 474 (487)
Q Consensus 401 n~~liN~Y~pG------~gI~~H~D~~~~~g~~IaslSLGs~~vm~F~~~~~~~~~~~v~L~~rSLlvmsG~aRy~w~Hg 474 (487)
..+.+|+|.+- -|+++|.|- | .|..|-=-..-=+...... .++.+.|.-.+|+++|--|++=-.|+-|
T Consensus 193 ~~lR~~~YPp~~~~~~~~g~~~HtD~----g-~lTlL~qd~v~GLQV~~~~-~g~Wi~V~p~pg~~vVNiGD~L~~~Tng 266 (345)
T PLN02750 193 SFARFNHYPPCPAPHLALGVGRHKDG----G-ALTVLAQDDVGGLQISRRS-DGEWIPVKPIPDAFIINIGNCMQVWTND 266 (345)
T ss_pred eEEEEEecCCCCCcccccCcCCCCCC----C-eEEEEecCCCCceEEeecC-CCeEEEccCCCCeEEEEhHHHHHHHhCC
Confidence 45678999861 289999995 2 2222211011113332211 3578999999999999999999999888
Q ss_pred cccCCcccccc
Q psy941 475 VLENESLDCLN 485 (487)
Q Consensus 475 I~~~~~~~~~~ 485 (487)
.-+....++++
T Consensus 267 ~~~St~HRVv~ 277 (345)
T PLN02750 267 LYWSAEHRVVV 277 (345)
T ss_pred eeecccceecc
Confidence 77777666653
No 48
>PLN02947 oxidoreductase
Probab=29.23 E-value=1.4e+02 Score=31.67 Aligned_cols=69 Identities=14% Similarity=-0.042 Sum_probs=44.8
Q ss_pred CeEEEeecCCC------CCCcCCCCCCCccCCeEEEEecCCCeEEEEEecCCCCeEEEEEecCCcEEeeccccccccccc
Q psy941 205 QYVHVLDLEQK------GYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTHE 278 (487)
Q Consensus 205 d~~lVN~Y~pg------~gI~~H~D~~~~~g~~IaslSLGs~~vm~F~~~~~~~~~~~v~L~~gSLlVm~G~aRy~w~H~ 278 (487)
..+-+|+|.+- -|+++|.|.- .|..|-=....=+.... .+.++.|.-.+|+++|--|+.=..|+-|
T Consensus 225 ~~lrln~YPp~p~~~~~~G~~~HTD~g-----~lTlL~Qd~v~GLQV~~---~g~Wi~V~p~pga~VVNvGD~Lq~~SNG 296 (374)
T PLN02947 225 QMMVVNCYPACPEPELTLGMPPHSDYG-----FLTLLLQDEVEGLQIMH---AGRWVTVEPIPGSFVVNVGDHLEIFSNG 296 (374)
T ss_pred eeeeeecCCCCCCcccccCCCCccCCC-----ceEEEEecCCCCeeEeE---CCEEEeCCCCCCeEEEEeCceeeeeeCC
Confidence 36778999972 2899999952 22222111111122222 3579999999999999999988888655
Q ss_pred ccc
Q psy941 279 VLE 281 (487)
Q Consensus 279 Ip~ 281 (487)
.-+
T Consensus 297 ~~k 299 (374)
T PLN02947 297 RYK 299 (374)
T ss_pred EEe
Confidence 444
No 49
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=28.61 E-value=1.1e+02 Score=30.67 Aligned_cols=75 Identities=12% Similarity=0.058 Sum_probs=50.4
Q ss_pred eEEEeccCC-----C-CCcccCCCCCcccCCceEEEecCCceEEEEEecCCCCeEEEEEeCCCcEEEecccccccccccc
Q psy941 402 YVHVLDLEQ-----K-GYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTHEV 475 (487)
Q Consensus 402 ~~liN~Y~p-----G-~gI~~H~D~~~~~g~~IaslSLGs~~vm~F~~~~~~~~~~~v~L~~rSLlvmsG~aRy~w~HgI 475 (487)
.+.+|+|.+ + -|+++|.|.- .|..|-=.+..=+.... .+..+.|.--+|+++|.-|++=..|+.|.
T Consensus 117 ~lrl~~YP~~~~~~~~~g~~~HtD~g-----~lTlL~qd~v~GLqV~~---~g~Wi~V~p~p~a~vVNiGD~l~~~tng~ 188 (262)
T PLN03001 117 NITVSYYPPCPQPELTLGLQSHSDFG-----AITLLIQDDVEGLQLLK---DAEWLMVPPISDAILIIIADQTEIITNGN 188 (262)
T ss_pred hheeecCCCCCCcccccCCcCCcCCC-----eeEEEEeCCCCceEEee---CCeEEECCCCCCcEEEEccHHHHHHhCCc
Confidence 356888876 1 2789999962 33333221112233332 24688888899999999999999999887
Q ss_pred ccCCccccc
Q psy941 476 LENESLDCL 484 (487)
Q Consensus 476 ~~~~~~~~~ 484 (487)
-+....+++
T Consensus 189 ~~S~~HRVv 197 (262)
T PLN03001 189 YKSAQHRAI 197 (262)
T ss_pred cccccceEE
Confidence 777666665
No 50
>PTZ00273 oxidase reductase; Provisional
Probab=27.14 E-value=1.1e+02 Score=31.39 Aligned_cols=77 Identities=14% Similarity=0.029 Sum_probs=50.7
Q ss_pred eEEEeccCC------CC-CcccCCCCCcccCCceEEEecCCceEEEEEecCCCCeEEEEEeCCCcEEEeccccccccccc
Q psy941 402 YVHVLDLEQ------KG-YIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTHE 474 (487)
Q Consensus 402 ~~liN~Y~p------G~-gI~~H~D~~~~~g~~IaslSLGs~~vm~F~~~~~~~~~~~v~L~~rSLlvmsG~aRy~w~Hg 474 (487)
.+.+|+|.+ ++ ++++|.|- | .|..|.--..-=+..... .+..+.|.-.+|+++|.-|++=-.|+-|
T Consensus 178 ~lrl~~YP~~~~~~~~~~g~~~HTD~----g-~lTlL~qd~~~GLqV~~~--~g~Wi~V~p~pg~lvVNvGD~l~~~TnG 250 (320)
T PTZ00273 178 VFRMKHYPALPQTKKGRTVCGEHTDY----G-IITLLYQDSVGGLQVRNL--SGEWMDVPPLEGSFVVNIGDMMEMWSNG 250 (320)
T ss_pred eeeeeecCCCCCccccCcccccccCC----C-eEEEEecCCCCceEEECC--CCCEEeCCCCCCeEEEEHHHHHHHHHCC
Confidence 466888975 12 78999996 2 222221111111333322 2468899999999999999999999888
Q ss_pred cccCCcccccc
Q psy941 475 VLENESLDCLN 485 (487)
Q Consensus 475 I~~~~~~~~~~ 485 (487)
.-+....+++|
T Consensus 251 ~~kSt~HRVv~ 261 (320)
T PTZ00273 251 RYRSTPHRVVN 261 (320)
T ss_pred eeeCCCccccC
Confidence 87777776654
No 51
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=27.07 E-value=1.3e+02 Score=31.42 Aligned_cols=66 Identities=14% Similarity=0.062 Sum_probs=45.1
Q ss_pred CeEEEeecCCC------CCCcCCCCCCCccCCeEEEEe---cCCCeEEEEEecCCCCeEEEEEecCCcEEeecccccccc
Q psy941 205 QYVHVLDLEQK------GYIKAHVDSVRFCGNTIAGLS---LLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKF 275 (487)
Q Consensus 205 d~~lVN~Y~pg------~gI~~H~D~~~~~g~~IaslS---LGs~~vm~F~~~~~~~~~~~v~L~~gSLlVm~G~aRy~w 275 (487)
..+-+|+|.+- -|+++|.|- | .|..|- .|+ +.... .+.++.|.-.+|+++|--|++=..|
T Consensus 197 ~~lrl~~YPp~~~~~~~~G~~~HtD~----g-~lTlL~Qd~v~G---LQV~~---~g~Wi~V~p~pgalvVNiGD~L~~~ 265 (348)
T PLN02912 197 QHMAINYYPPCPQPELTYGLPGHKDA----N-LITVLLQDEVSG---LQVFK---DGKWIAVNPIPNTFIVNLGDQMQVI 265 (348)
T ss_pred ceeeeeecCCCCChhhcCCcCCCcCC----C-ceEEEEECCCCc---eEEEE---CCcEEECCCcCCeEEEEcCHHHHHH
Confidence 46778999971 379999995 2 233231 222 22222 3579999999999999999988888
Q ss_pred cccccc
Q psy941 276 THEVLE 281 (487)
Q Consensus 276 ~H~Ip~ 281 (487)
+-|.-+
T Consensus 266 TNG~~k 271 (348)
T PLN02912 266 SNDKYK 271 (348)
T ss_pred hCCEEE
Confidence 665544
No 52
>COG3826 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=26.37 E-value=2.3e+02 Score=27.24 Aligned_cols=81 Identities=17% Similarity=0.200 Sum_probs=47.0
Q ss_pred CCchhhHHHHHHHHhhcCCCCCCCCCeEEEeecCCCCCCcCCCCCCCccCC---eEEEEecCCCeEEEEEec-------C
Q psy941 180 KWNEENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKAHVDSVRFCGN---TIAGLSLLSDSVMKLVDE-------K 249 (487)
Q Consensus 180 ~w~~~~~~i~~rl~~~~~~~~~~~~d~~lVN~Y~pg~gI~~H~D~~~~~g~---~IaslSLGs~~vm~F~~~-------~ 249 (487)
.||..+.+.+++.-+.. ...| ..|+..|-||+.-..|+|- +|+ +.-..=|.|+---+|... .
T Consensus 104 r~P~tlad~L~~CHaAG----Q~Rp-TpLlLqYgpgD~NcLHQDL---YGelvFPLQvailLsePg~DfTGGEF~lvEQR 175 (236)
T COG3826 104 RYPATLADFLARCHAAG----QVRP-TPLLLQYGPGDYNCLHQDL---YGELVFPLQVAILLSEPGTDFTGGEFVLVEQR 175 (236)
T ss_pred CCchhHHHHHHHHHhcc----CccC-CceeEEecCCccchhhhhh---hhceeeeeeEEEeccCCCCcccCceEEEEecc
Confidence 46666666666665431 1123 4567899999999999995 454 222222223222222221 1
Q ss_pred --CCCeEEEEEecCCcEEeec
Q psy941 250 --TKTQEILVLLKQRSLYVMK 268 (487)
Q Consensus 250 --~~~~~~~v~L~~gSLlVm~ 268 (487)
-.+...-|.|+.|+-+|+.
T Consensus 176 PR~QSr~~vvpLrqG~g~vFa 196 (236)
T COG3826 176 PRMQSRPTVVPLRQGDGVVFA 196 (236)
T ss_pred cccccCCceeeccCCceEEEE
Confidence 1234567899999998885
No 53
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase
Probab=25.93 E-value=1.7e+02 Score=30.67 Aligned_cols=71 Identities=18% Similarity=0.028 Sum_probs=45.3
Q ss_pred CeEEEeecCC--C----CCCcCCCCCCCccCCeEEEEecCCCeEEEEEecCCCCeEEEEEecCCcEEeeccccccccccc
Q psy941 205 QYVHVLDLEQ--K----GYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTHE 278 (487)
Q Consensus 205 d~~lVN~Y~p--g----~gI~~H~D~~~~~g~~IaslSLGs~~vm~F~~~~~~~~~~~v~L~~gSLlVm~G~aRy~w~H~ 278 (487)
..+.+|+|.+ . -|+++|.|.- .|..|-=-...=+..... +.+.++.|.-.+|+++|--|+.=..|+-+
T Consensus 195 ~~lrl~~YP~~~~~~~~~G~~~HTD~g-----~lTlL~Qd~v~GLQV~~~-~~~~Wi~Vpp~pgalVVNiGD~L~~~TNG 268 (358)
T PLN02515 195 QKVVVNYYPKCPQPDLTLGLKRHTDPG-----TITLLLQDQVGGLQATRD-GGKTWITVQPVEGAFVVNLGDHGHYLSNG 268 (358)
T ss_pred ceEEEeecCCCCChhhccCCCCCCCCC-----eEEEEecCCCCceEEEEC-CCCeEEECCCCCCeEEEEccHHHHHHhCC
Confidence 3577899986 1 2899999952 222221111111333222 23469999999999999999988888655
Q ss_pred ccc
Q psy941 279 VLE 281 (487)
Q Consensus 279 Ip~ 281 (487)
.-+
T Consensus 269 ~~k 271 (358)
T PLN02515 269 RFK 271 (358)
T ss_pred eee
Confidence 443
No 54
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase
Probab=24.74 E-value=1.7e+02 Score=30.73 Aligned_cols=77 Identities=17% Similarity=0.039 Sum_probs=50.3
Q ss_pred eEEEeccCC--C----CCcccCCCCCcccCCceEEEecCCceEEEEEecCCCCeEEEEEeCCCcEEEecccccccccccc
Q psy941 402 YVHVLDLEQ--K----GYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTHEV 475 (487)
Q Consensus 402 ~~liN~Y~p--G----~gI~~H~D~~~~~g~~IaslSLGs~~vm~F~~~~~~~~~~~v~L~~rSLlvmsG~aRy~w~HgI 475 (487)
.+.+|+|.+ . -|+++|.|.- .|..|-=-...=+...... .+..+.|.-.+|+++|--|++=-.|+-|.
T Consensus 196 ~lrl~~YP~~~~~~~~~G~~~HTD~g-----~lTlL~Qd~v~GLQV~~~~-~~~Wi~Vpp~pgalVVNiGD~L~~~TNG~ 269 (358)
T PLN02515 196 KVVVNYYPKCPQPDLTLGLKRHTDPG-----TITLLLQDQVGGLQATRDG-GKTWITVQPVEGAFVVNLGDHGHYLSNGR 269 (358)
T ss_pred eEEEeecCCCCChhhccCCCCCCCCC-----eEEEEecCCCCceEEEECC-CCeEEECCCCCCeEEEEccHHHHHHhCCe
Confidence 567899986 1 2899999962 2222211111123333322 23688999999999999999988898777
Q ss_pred ccCCccccc
Q psy941 476 LENESLDCL 484 (487)
Q Consensus 476 ~~~~~~~~~ 484 (487)
-+....+++
T Consensus 270 ~kSt~HRVv 278 (358)
T PLN02515 270 FKNADHQAV 278 (358)
T ss_pred eeeecceEE
Confidence 666666653
No 55
>PLN02156 gibberellin 2-beta-dioxygenase
Probab=24.20 E-value=2.3e+02 Score=29.47 Aligned_cols=68 Identities=15% Similarity=0.138 Sum_probs=46.0
Q ss_pred CeEEEeecCCC--------CCCcCCCCCCCccCCeEEEEe---cCCCeEEEEEecCCCCeEEEEEecCCcEEeecccccc
Q psy941 205 QYVHVLDLEQK--------GYIKAHVDSVRFCGNTIAGLS---LLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARY 273 (487)
Q Consensus 205 d~~lVN~Y~pg--------~gI~~H~D~~~~~g~~IaslS---LGs~~vm~F~~~~~~~~~~~v~L~~gSLlVm~G~aRy 273 (487)
..+-+|+|.+- -|+++|.|-- .|..|- .|+ +..... .++++.|.-.+|+++|--|+.=.
T Consensus 178 ~~lRl~~YP~~~~~~~~~~~g~~~HTD~g-----~lTlL~Qd~v~G---LQV~~~--~g~Wi~Vpp~pga~VVNiGD~l~ 247 (335)
T PLN02156 178 SCLRMNHYPEKEETPEKVEIGFGEHTDPQ-----LISLLRSNDTAG---LQICVK--DGTWVDVPPDHSSFFVLVGDTLQ 247 (335)
T ss_pred ceEeEEeCCCCCCCccccccCCCCccCCC-----ceEEEEeCCCCc---eEEEeC--CCCEEEccCCCCcEEEEhHHHHH
Confidence 36778999861 2788999952 222221 222 222222 35799999999999999999999
Q ss_pred ccccccccc
Q psy941 274 KFTHEVLEN 282 (487)
Q Consensus 274 ~w~H~Ip~~ 282 (487)
.|+.+.-+.
T Consensus 248 ~wTNg~~kS 256 (335)
T PLN02156 248 VMTNGRFKS 256 (335)
T ss_pred HHhCCeeec
Confidence 997776653
No 56
>PLN02997 flavonol synthase
Probab=24.16 E-value=1.6e+02 Score=30.53 Aligned_cols=78 Identities=18% Similarity=0.085 Sum_probs=0.0
Q ss_pred eEEEeecCC------CCCCcCCCCCCCccCCeEEEEecCCCeEEEEEecCCCCeEEEEEecCCcEEeeccccccccc---
Q psy941 206 YVHVLDLEQ------KGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFT--- 276 (487)
Q Consensus 206 ~~lVN~Y~p------g~gI~~H~D~~~~~g~~IaslSLGs~~vm~F~~~~~~~~~~~v~L~~gSLlVm~G~aRy~w~--- 276 (487)
.+-+|+|.+ .-|+++|.|. ..|..|-=-...=+... ..++++.|.-.+|+++|--|+.=..|+
T Consensus 184 ~lRl~~YP~~~~~~~~~g~~~HTD~-----g~lTlL~Qd~v~GLQV~---~~g~Wi~V~p~pgalvVNiGD~Le~~TNG~ 255 (325)
T PLN02997 184 VLRVNFYPPTQDTELVIGAAAHSDM-----GAIALLIPNEVPGLQAF---KDEQWLDLNYINSAVVVIIGDQLMRMTNGR 255 (325)
T ss_pred eeeeecCCCCCCcccccCccCccCC-----CceEEEecCCCCCEEEe---ECCcEEECCCCCCeEEEEechHHHHHhCCc
Q ss_pred -----ccccccccCCCCCcccc-cC
Q psy941 277 -----HEVLENEKSYFGDLRFK-TF 295 (487)
Q Consensus 277 -----H~Ip~~~~d~~~g~RIs-Tf 295 (487)
|.|.... ...|+| .|
T Consensus 256 ~kSt~HRVv~~~----~~~R~Si~f 276 (325)
T PLN02997 256 FKNVLHRAKTDK----ERLRISWPV 276 (325)
T ss_pred cccccceeeCCC----CCCEEEEEE
No 57
>PLN02947 oxidoreductase
Probab=23.57 E-value=2e+02 Score=30.50 Aligned_cols=75 Identities=12% Similarity=-0.084 Sum_probs=50.1
Q ss_pred eEEEeccCCC------CCcccCCCCCcccCCceEEEecCCceEEEEEecCCCCeEEEEEeCCCcEEEecccccccccccc
Q psy941 402 YVHVLDLEQK------GYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTHEV 475 (487)
Q Consensus 402 ~~liN~Y~pG------~gI~~H~D~~~~~g~~IaslSLGs~~vm~F~~~~~~~~~~~v~L~~rSLlvmsG~aRy~w~HgI 475 (487)
.+.+|+|.+- -|+++|.|-- .|..|-=..-.=+...+ .+..+.|.-.+|+++|--|+.=-.|+-|.
T Consensus 226 ~lrln~YPp~p~~~~~~G~~~HTD~g-----~lTlL~Qd~v~GLQV~~---~g~Wi~V~p~pga~VVNvGD~Lq~~SNG~ 297 (374)
T PLN02947 226 MMVVNCYPACPEPELTLGMPPHSDYG-----FLTLLLQDEVEGLQIMH---AGRWVTVEPIPGSFVVNVGDHLEIFSNGR 297 (374)
T ss_pred eeeeecCCCCCCcccccCCCCccCCC-----ceEEEEecCCCCeeEeE---CCEEEeCCCCCCeEEEEeCceeeeeeCCE
Confidence 5668999861 2899999962 22222111111233332 25689999999999999999999998777
Q ss_pred ccCCccccc
Q psy941 476 LENESLDCL 484 (487)
Q Consensus 476 ~~~~~~~~~ 484 (487)
-+....+++
T Consensus 298 ~kS~~HRVv 306 (374)
T PLN02947 298 YKSVLHRVR 306 (374)
T ss_pred Eeccccccc
Confidence 766666654
No 58
>COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=23.40 E-value=1e+02 Score=31.62 Aligned_cols=78 Identities=14% Similarity=0.036 Sum_probs=52.6
Q ss_pred CCCcCCCCCCCccCCeEEEEec-----------CCCeEEEEEecCC-----C-------CeEEEEEecCCcEEeeccccc
Q psy941 216 GYIKAHVDSVRFCGNTIAGLSL-----------LSDSVMKLVDEKT-----K-------TQEILVLLKQRSLYVMKDDAR 272 (487)
Q Consensus 216 ~gI~~H~D~~~~~g~~IaslSL-----------Gs~~vm~F~~~~~-----~-------~~~~~v~L~~gSLlVm~G~aR 272 (487)
.+=.||+|-+-.+-...+.|++ |++.+.--.|+-+ + ...+.|.|+.||++++.+..
T Consensus 131 ~~t~~HqD~~~~~~~~~~lV~~wiAl~d~~~dnGat~vvPgSH~~~~~~~r~d~~~y~~~~~~pv~lekGDallF~~~L- 209 (299)
T COG5285 131 VATRWHQDYPLVSPGYPALVNAWIALCDFTEDNGATLVVPGSHKWDVIPERPDHETYLERNAVPVELEKGDALLFNGSL- 209 (299)
T ss_pred cccccccccccccCCccceEEEEEeccccccccCceEEEecccccccCCCCCCccchhhhcceeeeecCCCEEEEcchh-
Confidence 3678999976666567777764 2233322222211 1 12688999999999999964
Q ss_pred ccccccccccccCCCCCcccc-cCccccc
Q psy941 273 YKFTHEVLENEKSYFGDLRFK-TFPLIHS 300 (487)
Q Consensus 273 y~w~H~Ip~~~~d~~~g~RIs-TfR~~~~ 300 (487)
| |+-..... ...|+. ||+.+..
T Consensus 210 --~-HaA~aNrT---~~~R~A~~~~~~~~ 232 (299)
T COG5285 210 --W-HAAGANRT---SADRVALTLQFTVS 232 (299)
T ss_pred --h-hhhhcCCC---CcccceEEEEEeec
Confidence 6 88777653 468999 9998866
No 59
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=22.50 E-value=1.6e+02 Score=30.73 Aligned_cols=76 Identities=13% Similarity=0.001 Sum_probs=50.8
Q ss_pred CeEEEeccCC------CCCcccCCCCCcccCCceEEEecCCceEEEEEecCCCCeEEEEEeCCCcEEEeccccccccccc
Q psy941 401 QYVHVLDLEQ------KGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTHE 474 (487)
Q Consensus 401 n~~liN~Y~p------G~gI~~H~D~~~~~g~~IaslSLGs~~vm~F~~~~~~~~~~~v~L~~rSLlvmsG~aRy~w~Hg 474 (487)
..+.+|+|.+ .-|+++|.|-- .|..|-=-..-=+...+ .++.+.|.-.+|+++|--|++=-.|+-|
T Consensus 197 ~~lrl~~YPp~~~~~~~~G~~~HtD~g-----~lTlL~Qd~v~GLQV~~---~g~Wi~V~p~pgalvVNiGD~L~~~TNG 268 (348)
T PLN02912 197 QHMAINYYPPCPQPELTYGLPGHKDAN-----LITVLLQDEVSGLQVFK---DGKWIAVNPIPNTFIVNLGDQMQVISND 268 (348)
T ss_pred ceeeeeecCCCCChhhcCCcCCCcCCC-----ceEEEEECCCCceEEEE---CCcEEECCCcCCeEEEEcCHHHHHHhCC
Confidence 3577899987 12789999962 22222100011122222 2468999999999999999999999888
Q ss_pred cccCCccccc
Q psy941 475 VLENESLDCL 484 (487)
Q Consensus 475 I~~~~~~~~~ 484 (487)
.-+....+++
T Consensus 269 ~~kSt~HRVv 278 (348)
T PLN02912 269 KYKSVLHRAV 278 (348)
T ss_pred EEEccccccc
Confidence 7777766664
No 60
>PLN02216 protein SRG1
Probab=22.16 E-value=2.1e+02 Score=30.02 Aligned_cols=78 Identities=14% Similarity=0.007 Sum_probs=0.0
Q ss_pred eEEEeecCC------CCCCcCCCCCCCccCCeEEEEec-CCCeEEEEEecCCCCeEEEEEecCCcEEeeccccccccc--
Q psy941 206 YVHVLDLEQ------KGYIKAHVDSVRFCGNTIAGLSL-LSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFT-- 276 (487)
Q Consensus 206 ~~lVN~Y~p------g~gI~~H~D~~~~~g~~IaslSL-Gs~~vm~F~~~~~~~~~~~v~L~~gSLlVm~G~aRy~w~-- 276 (487)
.+-+|+|.+ .-|+++|.|. ..|..|-- ....=+... ..+.++.|.-.+|+++|--|+.=..|+
T Consensus 211 ~lRl~~YPp~p~~~~~~G~~~HtD~-----g~lTlL~q~~~v~GLQV~---~~g~Wi~V~p~pgalvVNiGD~L~~~TNG 282 (357)
T PLN02216 211 SIRMNYYPPCPQPDQVIGLTPHSDA-----VGLTILLQVNEVEGLQIK---KDGKWVSVKPLPNALVVNVGDILEIITNG 282 (357)
T ss_pred eeEEeecCCCCCcccccCccCcccC-----ceEEEEEecCCCCceeEE---ECCEEEECCCCCCeEEEEcchhhHhhcCC
Q ss_pred ------ccccccccCCCCCcccc-cC
Q psy941 277 ------HEVLENEKSYFGDLRFK-TF 295 (487)
Q Consensus 277 ------H~Ip~~~~d~~~g~RIs-Tf 295 (487)
|.|.... ...|+| .|
T Consensus 283 ~~kS~~HRVv~~~----~~~R~Si~~ 304 (357)
T PLN02216 283 TYRSIEHRGVVNS----EKERLSVAT 304 (357)
T ss_pred eeeccCceeecCC----CCCEEEEEE
No 61
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase
Probab=22.06 E-value=1.6e+02 Score=30.33 Aligned_cols=82 Identities=17% Similarity=0.031 Sum_probs=0.0
Q ss_pred eEEEeecCC------CCCCcCCCCCCCccCCeEEEEec-CCCeEEEEEecCCCCeEEEEEecCCcEEeeccccccccccc
Q psy941 206 YVHVLDLEQ------KGYIKAHVDSVRFCGNTIAGLSL-LSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTHE 278 (487)
Q Consensus 206 ~~lVN~Y~p------g~gI~~H~D~~~~~g~~IaslSL-Gs~~vm~F~~~~~~~~~~~v~L~~gSLlVm~G~aRy~w~H~ 278 (487)
.+-+|+|.+ ..|+++|.|. ..|..|-= +...=+... ..+.++.|.-.+|+++|.-|++=..|+.+
T Consensus 159 ~lRl~~YPp~~~~~~~~G~~~HTD~-----g~lTlL~qd~~v~GLQV~---~~g~Wi~V~p~pg~lvVNiGD~l~~~Tng 230 (321)
T PLN02299 159 GTKVSNYPPCPKPDLVKGLRAHTDA-----GGIILLFQDDKVSGLQLL---KDGEWVDVPPMRHSIVVNLGDQLEVITNG 230 (321)
T ss_pred eeeeEecCCCCCcccccCccCccCC-----CeEEEEEecCCCCCcCcc---cCCeEEECCCCCCeEEEEeCHHHHHHhCC
Q ss_pred ccccccCC----CCCcccc-cC
Q psy941 279 VLENEKSY----FGDLRFK-TF 295 (487)
Q Consensus 279 Ip~~~~d~----~~g~RIs-Tf 295 (487)
.-+..... ..+.|+| .|
T Consensus 231 ~~kS~~HRVv~~~~~~R~Si~~ 252 (321)
T PLN02299 231 KYKSVMHRVVAQTDGNRMSIAS 252 (321)
T ss_pred ceecccceeecCCCCCEEEEEE
No 62
>PLN02254 gibberellin 3-beta-dioxygenase
Probab=21.98 E-value=2e+02 Score=30.25 Aligned_cols=77 Identities=14% Similarity=0.047 Sum_probs=50.5
Q ss_pred CeEEEeccCC-----CC-CcccCCCCCcccCCceEEEecCCceEEEEEecCCCCeEEEEEeCCCcEEEeccccccccccc
Q psy941 401 QYVHVLDLEQ-----KG-YIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTHE 474 (487)
Q Consensus 401 n~~liN~Y~p-----G~-gI~~H~D~~~~~g~~IaslSLGs~~vm~F~~~~~~~~~~~v~L~~rSLlvmsG~aRy~w~Hg 474 (487)
..+.+|+|.+ .. |+++|.|-- .|..|-=...-=+..... .+..+.|.-.+|+++|--|++=..|+-|
T Consensus 210 ~~lRl~~YPp~p~~~~~~G~~~HtD~g-----~lTiL~Qd~v~GLQV~~~--~~~Wi~V~p~pgalVVNiGD~lq~~SNg 282 (358)
T PLN02254 210 AALQLNSYPVCPDPDRAMGLAPHTDSS-----LLTILYQSNTSGLQVFRE--GVGWVTVPPVPGSLVVNVGDLLHILSNG 282 (358)
T ss_pred eeEEEecCCCCCCcccccCcCCccCCC-----cEEEEecCCCCCceEECC--CCEEEEcccCCCCEEEEhHHHHHHHhCC
Confidence 3566899986 22 899999962 222221110111333322 2368999999999999999998889888
Q ss_pred cccCCccccc
Q psy941 475 VLENESLDCL 484 (487)
Q Consensus 475 I~~~~~~~~~ 484 (487)
.-+....+++
T Consensus 283 ~~kS~~HRVv 292 (358)
T PLN02254 283 RFPSVLHRAV 292 (358)
T ss_pred eeccccceee
Confidence 7776666654
No 63
>PLN02704 flavonol synthase
Probab=21.93 E-value=1.3e+02 Score=31.18 Aligned_cols=74 Identities=11% Similarity=-0.041 Sum_probs=48.5
Q ss_pred EEEeccCC-----C-CCcccCCCCCcccCCceEEEecCCceEEEEEecCCCCeEEEEEeCCCcEEEeccccccccccccc
Q psy941 403 VHVLDLEQ-----K-GYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTHEVL 476 (487)
Q Consensus 403 ~liN~Y~p-----G-~gI~~H~D~~~~~g~~IaslSLGs~~vm~F~~~~~~~~~~~v~L~~rSLlvmsG~aRy~w~HgI~ 476 (487)
+.+|+|.+ + -|+++|.|-- .|..|-=....=+...+ .+..+.|.-.+|+++|--|+.=-.|+-|.-
T Consensus 201 lrl~~YP~~~~~~~~~g~~~HtD~g-----~lTlL~qd~v~GLQV~~---~g~Wi~V~p~pg~lvVNvGD~L~~~TNg~~ 272 (335)
T PLN02704 201 LKINYYPPCPRPDLALGVVAHTDMS-----AITILVPNEVQGLQVFR---DDHWFDVKYIPNALVIHIGDQIEILSNGKY 272 (335)
T ss_pred hhhhcCCCCCCcccccCccCccCCc-----ceEEEecCCCCceeEeE---CCEEEeCCCCCCeEEEEechHHHHHhCCee
Confidence 44577765 2 2799999962 22222111111133322 256899999999999999999999998887
Q ss_pred cCCccccc
Q psy941 477 ENESLDCL 484 (487)
Q Consensus 477 ~~~~~~~~ 484 (487)
+....+++
T Consensus 273 kSt~HRVv 280 (335)
T PLN02704 273 KSVLHRTT 280 (335)
T ss_pred ecccceee
Confidence 77776665
No 64
>PLN02704 flavonol synthase
Probab=21.33 E-value=1.5e+02 Score=30.74 Aligned_cols=68 Identities=12% Similarity=-0.014 Sum_probs=43.6
Q ss_pred eEEEeecCCC------CCCcCCCCCCCccCCeEEEEecCCCeEEEEEecCCCCeEEEEEecCCcEEeecccccccccccc
Q psy941 206 YVHVLDLEQK------GYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTHEV 279 (487)
Q Consensus 206 ~~lVN~Y~pg------~gI~~H~D~~~~~g~~IaslSLGs~~vm~F~~~~~~~~~~~v~L~~gSLlVm~G~aRy~w~H~I 279 (487)
.+-+|+|.+- -|+++|.|-- .|..|-=-+..=+.... .+.++.|.-.+|+++|--|+.=..|+-+.
T Consensus 200 ~lrl~~YP~~~~~~~~~g~~~HtD~g-----~lTlL~qd~v~GLQV~~---~g~Wi~V~p~pg~lvVNvGD~L~~~TNg~ 271 (335)
T PLN02704 200 LLKINYYPPCPRPDLALGVVAHTDMS-----AITILVPNEVQGLQVFR---DDHWFDVKYIPNALVIHIGDQIEILSNGK 271 (335)
T ss_pred hhhhhcCCCCCCcccccCccCccCCc-----ceEEEecCCCCceeEeE---CCEEEeCCCCCCeEEEEechHHHHHhCCe
Confidence 3556899861 2799999952 12222110101122222 35799999999999999999988887665
Q ss_pred cc
Q psy941 280 LE 281 (487)
Q Consensus 280 p~ 281 (487)
-+
T Consensus 272 ~k 273 (335)
T PLN02704 272 YK 273 (335)
T ss_pred ee
Confidence 54
No 65
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=21.08 E-value=1.7e+02 Score=30.26 Aligned_cols=77 Identities=19% Similarity=0.181 Sum_probs=0.0
Q ss_pred EeecCC-------CCCCcCCCCCCCccCCeEEEEecCCCeEEEEEecCC--CCeEEEEEecCCcEEeeccccccccc---
Q psy941 209 VLDLEQ-------KGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKT--KTQEILVLLKQRSLYVMKDDARYKFT--- 276 (487)
Q Consensus 209 VN~Y~p-------g~gI~~H~D~~~~~g~~IaslSLGs~~vm~F~~~~~--~~~~~~v~L~~gSLlVm~G~aRy~w~--- 276 (487)
+|+|.+ .-|+++|.|- ..|..|-=-...=+....... .++++.|.-.+|+++|--|++=..|+
T Consensus 186 l~~YP~~~~~~~~~~g~~~HTD~-----g~lTlL~qd~v~GLQV~~~~~~~~g~Wi~Vpp~pg~~VVNiGD~L~~wTng~ 260 (332)
T PLN03002 186 LLRYQGISDPSKGIYACGAHSDF-----GMMTLLATDGVMGLQICKDKNAMPQKWEYVPPIKGAFIVNLGDMLERWSNGF 260 (332)
T ss_pred eeeCCCCCCcccCccccccccCC-----CeEEEEeeCCCCceEEecCCCCCCCcEEECCCCCCeEEEEHHHHHHHHhCCe
Q ss_pred -----ccccccccCCCCCcccc-cC
Q psy941 277 -----HEVLENEKSYFGDLRFK-TF 295 (487)
Q Consensus 277 -----H~Ip~~~~d~~~g~RIs-Tf 295 (487)
|.|.. ....|+| .|
T Consensus 261 ~kSt~HRVv~-----~~~~R~Sia~ 280 (332)
T PLN03002 261 FKSTLHRVLG-----NGQERYSIPF 280 (332)
T ss_pred eECcCCeecC-----CCCCeeEEEE
No 66
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=20.65 E-value=2.5e+02 Score=29.34 Aligned_cols=82 Identities=15% Similarity=0.110 Sum_probs=0.0
Q ss_pred eEEEeecCC------CCCCcCCCCCCCccCCeEEEEecCCCeEEEEEecCCCCeEEEEEecCCcEEeecccccccccccc
Q psy941 206 YVHVLDLEQ------KGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTHEV 279 (487)
Q Consensus 206 ~~lVN~Y~p------g~gI~~H~D~~~~~g~~IaslSLGs~~vm~F~~~~~~~~~~~v~L~~gSLlVm~G~aRy~w~H~I 279 (487)
..-+|+|.+ .-|+++|.|- ..|..|-=....=+... ..+.++.|.-.+|+++|.-|+.=..|+-+.
T Consensus 201 ~lRl~~YPp~~~~~~~~g~~aHTD~-----g~lTlL~Qd~v~GLQV~---~~g~Wv~V~p~pgalVVNiGD~Le~wTNg~ 272 (341)
T PLN02984 201 VIRVYRYPQCSNEAEAPGMEVHTDS-----SVISILNQDEVGGLEVM---KDGEWFNVKPIANTLVVNLGDMMQVISDDE 272 (341)
T ss_pred eEEEEeCCCCCCcccccCccCccCC-----CceEEEEeCCCCCeeEe---eCCceEECCCCCCeEEEECChhhhhhcCCe
Q ss_pred cccccCCC-----CCcccc-cC
Q psy941 280 LENEKSYF-----GDLRFK-TF 295 (487)
Q Consensus 280 p~~~~d~~-----~g~RIs-Tf 295 (487)
-+.....+ ...|+| .|
T Consensus 273 ~kSt~HRVv~~~~~~~R~Sia~ 294 (341)
T PLN02984 273 YKSVLHRVGKRNKKKERYSICY 294 (341)
T ss_pred eeCCCCccccCCCCCCeEEEEE
No 67
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=20.49 E-value=3e+02 Score=28.61 Aligned_cols=71 Identities=10% Similarity=0.063 Sum_probs=45.0
Q ss_pred CeEEEeecCCC------CCCcCCCCCCCccCCeEEEEecCCCeEEEEEecCCCCeEEEEEecCCcEEeeccccccccccc
Q psy941 205 QYVHVLDLEQK------GYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTHE 278 (487)
Q Consensus 205 d~~lVN~Y~pg------~gI~~H~D~~~~~g~~IaslSLGs~~vm~F~~~~~~~~~~~v~L~~gSLlVm~G~aRy~w~H~ 278 (487)
..+-+|+|.+- -|+++|.|- | .|..|-=-..-=+..... ..++++.|.-.+|+++|--|++=..|+-+
T Consensus 193 ~~lR~~~YPp~~~~~~~~g~~~HtD~----g-~lTlL~qd~v~GLQV~~~-~~g~Wi~V~p~pg~~vVNiGD~L~~~Tng 266 (345)
T PLN02750 193 SFARFNHYPPCPAPHLALGVGRHKDG----G-ALTVLAQDDVGGLQISRR-SDGEWIPVKPIPDAFIINIGNCMQVWTND 266 (345)
T ss_pred eEEEEEecCCCCCcccccCcCCCCCC----C-eEEEEecCCCCceEEeec-CCCeEEEccCCCCeEEEEhHHHHHHHhCC
Confidence 46778999862 389999995 2 222221100011222221 23579999999999999999988888655
Q ss_pred ccc
Q psy941 279 VLE 281 (487)
Q Consensus 279 Ip~ 281 (487)
.-+
T Consensus 267 ~~~ 269 (345)
T PLN02750 267 LYW 269 (345)
T ss_pred eee
Confidence 444
No 68
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=20.37 E-value=2e+02 Score=30.06 Aligned_cols=79 Identities=8% Similarity=-0.014 Sum_probs=0.0
Q ss_pred EeecCC------CCCCcCCCCCCCccCCeEEEEec-CCCeEEEEEecCCCCeEEEEEecCCcEEeecccccccccccccc
Q psy941 209 VLDLEQ------KGYIKAHVDSVRFCGNTIAGLSL-LSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTHEVLE 281 (487)
Q Consensus 209 VN~Y~p------g~gI~~H~D~~~~~g~~IaslSL-Gs~~vm~F~~~~~~~~~~~v~L~~gSLlVm~G~aRy~w~H~Ip~ 281 (487)
+|+|.+ .-|+++|.|. ..|..|-= +...=+... ..++++.|.-.+|+++|--|++=..|+-+.-+
T Consensus 207 l~~YPp~~~~~~~~g~~~HTD~-----g~lTlL~qd~~v~GLQV~---~~g~Wi~V~p~pg~lVVNiGD~Le~~Tng~~k 278 (348)
T PLN00417 207 FNMYPPCPRPDKVIGVKPHADG-----SAFTLLLPDKDVEGLQFL---KDGKWYKAPIVPDTILINVGDQMEIMSNGIYK 278 (348)
T ss_pred eeecCCCCCcccccCCcCccCC-----CceEEEEecCCCCceeEe---ECCeEEECCCCCCcEEEEcChHHHHHhCCeec
Q ss_pred cccCC----CCCcccc-cC
Q psy941 282 NEKSY----FGDLRFK-TF 295 (487)
Q Consensus 282 ~~~d~----~~g~RIs-Tf 295 (487)
..... ....|+| .|
T Consensus 279 St~HRVv~~~~~~R~Si~f 297 (348)
T PLN00417 279 SPVHRVVTNREKERISVAT 297 (348)
T ss_pred ccceEEecCCCCCEEEEEE
No 69
>PLN02365 2-oxoglutarate-dependent dioxygenase
Probab=20.35 E-value=2.2e+02 Score=28.97 Aligned_cols=76 Identities=16% Similarity=0.090 Sum_probs=51.4
Q ss_pred eEEEeccCC-----C-CCcccCCCCCcccCCceEEEecCC--ceEEEEEecCCCCeEEEEEeCCCcEEEecccccccccc
Q psy941 402 YVHVLDLEQ-----K-GYIKAHVDSVRFCGNTIAGLSLLS--DSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTH 473 (487)
Q Consensus 402 ~~liN~Y~p-----G-~gI~~H~D~~~~~g~~IaslSLGs--~~vm~F~~~~~~~~~~~v~L~~rSLlvmsG~aRy~w~H 473 (487)
.+.+|+|.+ + -|+++|.|. | .|..| +.. .-=+..... ..++.+.|.-.+|+++|.-|++=..|+.
T Consensus 150 ~lr~~~YP~~p~~~~~~g~~~HtD~----g-~lTlL-~qd~~~~GLqV~~~-~~g~Wi~V~p~pga~vVNiGD~l~~~TN 222 (300)
T PLN02365 150 QFRINKYNFTPETVGSSGVQIHTDS----G-FLTIL-QDDENVGGLEVMDP-SSGEFVPVDPLPGTLLVNLGDVATAWSN 222 (300)
T ss_pred ceeeeecCCCCCccccccccCccCC----C-ceEEE-ecCCCcCceEEEEC-CCCeEEecCCCCCeEEEEhhHHHHHHhC
Confidence 456788854 2 389999996 2 33333 111 112444333 1357889999999999999999999988
Q ss_pred ccccCCccccc
Q psy941 474 EVLENESLDCL 484 (487)
Q Consensus 474 gI~~~~~~~~~ 484 (487)
|.-+....+++
T Consensus 223 G~~~St~HRVv 233 (300)
T PLN02365 223 GRLCNVKHRVQ 233 (300)
T ss_pred CceecccceeE
Confidence 88777776665
No 70
>KOG0143|consensus
Probab=20.32 E-value=2.5e+02 Score=29.01 Aligned_cols=74 Identities=12% Similarity=-0.054 Sum_probs=47.0
Q ss_pred eEEEeccCC---C---CCcccCCCCCcccCCceEEEecC-CceEEEEEecCCCCeEEEEEeCCCcEEEeccccccccccc
Q psy941 402 YVHVLDLEQ---K---GYIKAHVDSVRFCGNTIAGLSLL-SDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTHE 474 (487)
Q Consensus 402 ~~liN~Y~p---G---~gI~~H~D~~~~~g~~IaslSLG-s~~vm~F~~~~~~~~~~~v~L~~rSLlvmsG~aRy~w~Hg 474 (487)
.+.+|.|.+ . =|+++|.|.- .|.+|--- .-.=+.+.+ + .+..+.|.--+++++|.-|+.=..|.=|
T Consensus 177 ~~r~n~Yp~cp~pe~~lGl~~HtD~~-----~lTiLlqd~~V~GLQv~~-~-dg~Wi~V~P~p~a~vVNiGD~l~~lSNG 249 (322)
T KOG0143|consen 177 VMRLNYYPPCPEPELTLGLGAHTDKS-----FLTILLQDDDVGGLQVFT-K-DGKWIDVPPIPGAFVVNIGDMLQILSNG 249 (322)
T ss_pred EEEEeecCCCcCccccccccCccCcC-----ceEEEEccCCcCceEEEe-c-CCeEEECCCCCCCEEEEcccHHhHhhCC
Confidence 566999996 1 2999999973 12222221 112233333 2 3568888888899999999988888766
Q ss_pred cccCCccc
Q psy941 475 VLENESLD 482 (487)
Q Consensus 475 I~~~~~~~ 482 (487)
+=+.-..+
T Consensus 250 ~ykSv~HR 257 (322)
T KOG0143|consen 250 RYKSVLHR 257 (322)
T ss_pred cccceEEE
Confidence 54444333
Done!