Query psy941
Match_columns 487
No_of_seqs 293 out of 2266
Neff 6.5
Searched_HMMs 29240
Date Fri Aug 16 18:28:16 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy941.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/941hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tht_A Alkylated DNA repair pr 100.0 1.7E-35 5.7E-40 303.1 13.0 195 119-324 99-332 (345)
2 2iuw_A Alkylated repair protei 100.0 2.2E-31 7.6E-36 260.2 13.8 165 130-300 39-231 (238)
3 3i3q_A Alpha-ketoglutarate-dep 100.0 5.3E-30 1.8E-34 245.8 13.8 170 128-300 4-204 (211)
4 3s57_A Alpha-ketoglutarate-dep 100.0 9.5E-30 3.2E-34 243.2 12.8 163 130-299 8-203 (204)
5 3tht_A Alkylated DNA repair pr 99.9 6.9E-28 2.3E-32 246.7 11.7 160 317-483 101-278 (345)
6 2iuw_A Alkylated repair protei 99.9 6.1E-27 2.1E-31 228.8 13.8 151 326-480 39-216 (238)
7 3s57_A Alpha-ketoglutarate-dep 99.9 1.1E-25 3.8E-30 215.0 12.0 151 326-480 8-189 (204)
8 3i3q_A Alpha-ketoglutarate-dep 99.9 3.6E-25 1.2E-29 212.2 12.7 156 323-481 3-185 (211)
9 3itq_A Prolyl 4-hydroxylase, a 97.5 0.00036 1.2E-08 66.6 9.3 150 128-293 36-205 (216)
10 2jig_A Prolyl-4 hydroxylase; h 97.0 0.0014 4.7E-08 62.4 8.1 161 127-293 16-210 (224)
11 3itq_A Prolyl 4-hydroxylase, a 96.9 0.0028 9.5E-08 60.5 9.1 143 325-479 37-199 (216)
12 3dkq_A PKHD-type hydroxylase S 96.4 0.0069 2.4E-07 58.7 8.0 145 129-294 17-190 (243)
13 2jig_A Prolyl-4 hydroxylase; h 96.3 0.009 3.1E-07 56.7 8.0 154 323-478 16-203 (224)
14 3dkq_A PKHD-type hydroxylase S 95.1 0.065 2.2E-06 51.8 8.9 139 323-479 15-182 (243)
15 2hbt_A EGL nine homolog 1; pro 94.0 0.46 1.6E-05 45.8 12.0 157 129-295 24-209 (247)
16 2hbt_A EGL nine homolog 1; pro 91.8 2.3 7.7E-05 40.9 13.2 150 326-481 25-203 (247)
17 3lfm_A Protein FTO; FAT MASS a 89.6 0.92 3.2E-05 47.2 8.5 137 203-350 188-366 (495)
18 2fct_A Syringomycin biosynthes 86.3 4.5 0.00016 39.4 11.1 43 253-300 218-261 (313)
19 2a1x_A Phytanoyl-COA dioxygena 81.2 3.6 0.00012 40.1 7.8 41 253-300 214-255 (308)
20 2rg4_A Uncharacterized protein 80.4 2.6 8.9E-05 39.6 6.2 85 204-296 102-204 (216)
21 3lfm_A Protein FTO; FAT MASS a 80.0 3.9 0.00013 42.6 7.7 85 399-483 188-307 (495)
22 2fct_A Syringomycin biosynthes 76.0 16 0.00056 35.3 10.8 27 326-352 20-46 (313)
23 3kt7_A PKHD-type hydroxylase T 63.8 35 0.0012 37.0 10.7 81 206-293 125-221 (633)
24 3nnf_A CURA; non-HAEM Fe(II)/a 52.7 8.7 0.0003 38.2 3.4 26 326-351 39-64 (344)
25 3oox_A Putative 2OG-Fe(II) oxy 43.7 28 0.00096 34.1 5.6 77 401-485 169-252 (312)
26 3gja_A CYTC3; halogenase, beta 39.1 26 0.0009 34.4 4.5 28 326-353 22-49 (319)
27 3on7_A Oxidoreductase, iron/as 37.5 38 0.0013 32.7 5.3 77 401-485 150-235 (280)
28 1w9y_A 1-aminocyclopropane-1-c 34.9 63 0.0021 31.8 6.5 74 402-484 156-237 (319)
29 3gja_A CYTC3; halogenase, beta 34.0 38 0.0013 33.3 4.7 27 131-157 23-49 (319)
30 3kt7_A PKHD-type hydroxylase T 33.6 2.5E+02 0.0087 30.4 11.2 72 402-477 125-212 (633)
31 3oox_A Putative 2OG-Fe(II) oxy 32.0 48 0.0017 32.4 5.1 69 205-281 169-244 (312)
32 1gp6_A Leucoanthocyanidin diox 31.8 63 0.0021 32.3 6.0 75 402-484 211-291 (356)
33 1dcs_A Deacetoxycephalosporin 30.9 43 0.0015 32.8 4.5 76 402-485 158-247 (311)
34 1w9y_A 1-aminocyclopropane-1-c 29.4 79 0.0027 31.0 6.2 67 206-281 156-230 (319)
35 1gp6_A Leucoanthocyanidin diox 26.7 77 0.0026 31.6 5.6 68 206-281 211-284 (356)
36 1odm_A Isopenicillin N synthas 26.7 33 0.0011 33.9 2.8 64 413-485 210-274 (331)
37 1dcs_A Deacetoxycephalosporin 24.3 51 0.0017 32.3 3.7 71 205-281 157-239 (311)
38 3on7_A Oxidoreductase, iron/as 22.7 1.2E+02 0.0039 29.2 5.9 69 205-281 150-227 (280)
39 2rg4_A Uncharacterized protein 22.3 1.3E+02 0.0046 27.6 6.0 74 401-479 103-193 (216)
40 1odm_A Isopenicillin N synthas 21.4 39 0.0013 33.4 2.2 64 209-281 186-266 (331)
No 1
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=100.00 E-value=1.7e-35 Score=303.10 Aligned_cols=195 Identities=20% Similarity=0.279 Sum_probs=150.7
Q ss_pred cccccccccccCCCeEEEcCCCCHHHHHHHHHHHHHH-----------hhccc-cccCCCCcCCCCccc---cc-CCCCc
Q psy941 119 EHCDGAVKSSILSNMLVINDFLSAEEEQSLLKEINQF-----------IKRQR-YEYDHWDDAIHGFRE---TE-RSKWN 182 (487)
Q Consensus 119 ~~~~~~~~~~~~~Gl~~ipdfls~~Ee~~Ll~~i~~~-----------l~rrr-y~~~~w~~~i~g~r~---~~-~~~w~ 182 (487)
.+|.......+++|++|++||||++||++|++.|+.. ++.|+ -.|+ +.+.+++... .+ ..+||
T Consensus 99 ~~~~~~~~~~lp~Gl~~~p~fis~~Ee~~Ll~~i~w~~~~~~~~~~~~l~~Rr~~~yG-~~Y~Ys~~~~~~~~p~p~~~P 177 (345)
T 3tht_A 99 VQWKELRPQALPPGLMVVEEIISSEEEKMLLESVDWTEDTDNQNSQKSLKHRRVKHFG-YEFHYENNNVDKDKPLSGGLP 177 (345)
T ss_dssp EEEEEEECCSCCTTEEEETTCSCHHHHHHHHTTCC----------------CEEECCC-------------------CCC
T ss_pred ccccccccccCCCceEEEcCcCCHHHHHHHHHhcccCCccccccCcccccCceEEEEC-CcccccccccccCCCCCcCcC
Confidence 3466556678999999999999999999999988631 22232 1112 1222222211 12 24599
Q ss_pred hhhHHHHHHHHhhcCCCCCCCCCeEEEeecCCCCCCcCCCCCCCccCCeEEEEecCCCeEEEEEecCCCCeEEEEEecCC
Q psy941 183 EENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQR 262 (487)
Q Consensus 183 ~~~~~i~~rl~~~~~~~~~~~~d~~lVN~Y~pg~gI~~H~D~~~~~g~~IaslSLGs~~vm~F~~~~~~~~~~~v~L~~g 262 (487)
+.+..+++|+.+..+.. ..||+|+||+|++|++|+||+|+++.||++||+||||++|+|.|++.. +..++|.|++|
T Consensus 178 ~~L~~l~~r~~~~~~~~--~~~n~~lvN~Y~~G~~I~~H~D~~~~~~~~I~slSLG~~~~f~f~~~~--~~~~~l~L~~g 253 (345)
T 3tht_A 178 DICESFLEKWLRKGYIK--HKPDQMTINQYEPGQGIPAHIDTHSAFEDEIVSLSLGSEIVMDFKHPD--GIAVPVMLPRR 253 (345)
T ss_dssp HHHHHHHHHHHHHTSCS--SCCSEEEEEEECTTCCEEEECCCTTTBCSCEEEEEESSCEEEEEECTT--SCEEEEEECTT
T ss_pred HHHHHHHHHHHhcccCC--CCCCEEEEEEecCCCCEeeccCCchhcCCeEEEEECCCceeEEEccCC--CceEEEEcCCC
Confidence 99999999987644332 248999999999999999999999999999999999999999999975 35889999999
Q ss_pred cEEeecccccccccccccccccCC----------------------CCCcccc-cCcccccCCCCCCCCccccccccccc
Q psy941 263 SLYVMKDDARYKFTHEVLENEKSY----------------------FGDLRFK-TFPLIHSHQSSTSSNQSHIFNEHCDG 319 (487)
Q Consensus 263 SLlVm~G~aRy~w~H~Ip~~~~d~----------------------~~g~RIs-TfR~~~~~~~~~~~~~~c~~~~~Cd~ 319 (487)
|||||+|++|+.|+|+|++++.|+ .++.||| |||++++ + .|.|+|+.+||+
T Consensus 254 sLlvM~G~~r~~w~H~I~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~--~----~c~C~~~~~cd~ 327 (345)
T 3tht_A 254 SLLVMTGESRYLWTHGITCRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQ--T----PCNCSYPLVCDS 327 (345)
T ss_dssp EEEEECTHHHHTSEEEECCCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCS--S----CCCCSCTTTCTT
T ss_pred cEEEEChHHhhceEccCCcccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCC--C----CcCCCCCCcccC
Confidence 999999999999999999998754 2678999 9999988 4 799999999999
Q ss_pred ccccc
Q psy941 320 AVKSS 324 (487)
Q Consensus 320 ~~~~~ 324 (487)
+.+..
T Consensus 328 ~~~~~ 332 (345)
T 3tht_A 328 QRKEN 332 (345)
T ss_dssp TTTTC
T ss_pred CCccC
Confidence 76543
No 2
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=99.97 E-value=2.2e-31 Score=260.19 Aligned_cols=165 Identities=14% Similarity=0.205 Sum_probs=131.5
Q ss_pred CCCeEEEcCCCCHHHHHHHHHHHHHHhhcc----------------ccccCCCCcCCCCcccccCCCCchhhHHHHHHHH
Q psy941 130 LSNMLVINDFLSAEEEQSLLKEINQFIKRQ----------------RYEYDHWDDAIHGFRETERSKWNEENTKIIARVQ 193 (487)
Q Consensus 130 ~~Gl~~ipdfls~~Ee~~Ll~~i~~~l~rr----------------ry~~~~w~~~i~g~r~~~~~~w~~~~~~i~~rl~ 193 (487)
++|+.|++|||+++||++|+++|.+.++.+ +-.|+...+.++|....+.++|++.+..+.+++.
T Consensus 39 i~gl~~~~~fl~~~e~~~Ll~~l~~~~~w~~~~~~~~g~~~~~~R~~~~~g~~~Y~Ys~~~~~~~p~wp~~l~~l~~~~~ 118 (238)
T 2iuw_A 39 VSRVCLYPGFVDVKEADWILEQLCQDVPWKQRTGIREDITYQQPRLTAWYGELPYTYSRITMEPNPHWHPVLRTLKNRIE 118 (238)
T ss_dssp CEEEEEETTSSCHHHHHHHHHHHHHHSCCBCCEEESSSCEEECSSEEEEEECCCTTSCHHHHCCBSSCCHHHHHHHHHHH
T ss_pred CCcEEEECCCCCHHHHHHHHHHHHHhCCCccCceecCCcccccCCeeEEcCCCccccCCcccCCCCCCCHHHHHHHHHHH
Confidence 347999999999999999999997642211 1111111112223222345689999989989887
Q ss_pred hhcCCCCCCCCCeEEEeecCCCC-CCcCCCCCCCccC--CeEEEEecCCCeEEEEEecCCC--------CeEEEEEecCC
Q psy941 194 NLAFPPNVTPIQYVHVLDLEQKG-YIKAHVDSVRFCG--NTIAGLSLLSDSVMKLVDEKTK--------TQEILVLLKQR 262 (487)
Q Consensus 194 ~~~~~~~~~~~d~~lVN~Y~pg~-gI~~H~D~~~~~g--~~IaslSLGs~~vm~F~~~~~~--------~~~~~v~L~~g 262 (487)
+.. . ..||+|+||+|++|+ +|+||+|++..+| ++||+||||++|+|.|++.... ...++|.|++|
T Consensus 119 ~~~-g---~~~n~~LvN~Y~~G~d~i~~H~D~~~~~~~~~~IaslSLG~~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~g 194 (238)
T 2iuw_A 119 ENT-G---HTFNSLLCNLYRNEKDSVDWHSDDEPSLGRCPIIASLSFGATRTFEMRKKPPPEENGDYTYVERVKIPLDHG 194 (238)
T ss_dssp HHH-S---CCCCEEEEEEECSTTCCEEEECCCCGGGCSSCCEEEEEEESCEEEEEEECCC--------CCCEEEEEECTT
T ss_pred HHh-C---CCCCEEEEEEECCCCCceeCCcCChhhcCCCCcEEEEECCCCEEEEEeccCCccccCcccCCceEEEEcCCC
Confidence 753 2 248999999999996 9999999999998 8999999999999999997532 35899999999
Q ss_pred cEEeecccccccccccccccccCCCCCcccc-cCccccc
Q psy941 263 SLYVMKDDARYKFTHEVLENEKSYFGDLRFK-TFPLIHS 300 (487)
Q Consensus 263 SLlVm~G~aRy~w~H~Ip~~~~d~~~g~RIs-TfR~~~~ 300 (487)
|||||+|++|+.|+|+|++++. .+++||| |||++.+
T Consensus 195 sllvM~G~~r~~w~H~I~~~~~--~~~~RIsLTfR~v~~ 231 (238)
T 2iuw_A 195 TLLIMEGATQADWQHRVPKEYH--SREPRVNLTFRTVYP 231 (238)
T ss_dssp CEEEEEETHHHHEEEEECCCSS--CCCCEEEEEEECCCC
T ss_pred CEEEEChhhhCccEecCCCcCC--CCCCEEEEEeeeccc
Confidence 9999999999999999999753 6899999 9999986
No 3
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=99.96 E-value=5.3e-30 Score=245.78 Aligned_cols=170 Identities=15% Similarity=0.236 Sum_probs=132.1
Q ss_pred ccCCCeEEEcCCCCHHHHHHHHHHHHHH-----hhccc-----------ccc--CCCCcCCCCcccc-----cCCCCch-
Q psy941 128 SILSNMLVINDFLSAEEEQSLLKEINQF-----IKRQR-----------YEY--DHWDDAIHGFRET-----ERSKWNE- 183 (487)
Q Consensus 128 ~~~~Gl~~ipdfls~~Ee~~Ll~~i~~~-----l~rrr-----------y~~--~~w~~~i~g~r~~-----~~~~w~~- 183 (487)
.+.||+.++++|+. +++++|+++|+++ +++.+ -.+ ..|.....+|+.. ...+|++
T Consensus 4 ~~~~g~~~~~~~~~-~~~~~l~~~~~~~~~~~p~~~~~~pgg~~~s~~~~~~g~~~W~~d~~~Y~Ys~~~~~~~~pw~~~ 82 (211)
T 3i3q_A 4 PLAAGAVILRRFAF-NAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTNCGHLGWTTHRQGYLYSPIDPQTNKPWPAM 82 (211)
T ss_dssp CCBTTBEEETTTTT-TTHHHHHHHHHHHHHHSCCBCCBCTTSCBCSSEEEEESSBEEEEETTEEEEESBCTTTSSBCCCC
T ss_pred ecCCCCEEECCcCh-HHHHHHHHHHHHHHhcCCCceeEcCCCCcCchhhcccccceeecCCCCcCcCCCccCCCCCCCch
Confidence 57899999999998 6788999999874 22221 011 1453322244332 2346776
Q ss_pred --hhHHHHHHHHhhcCCCCCCCCCeEEEeecCCCCCCcCCCC-CCCccCCeEEEEecCCCeEEEEEecCCCCeEEEEEec
Q psy941 184 --ENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKAHVD-SVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLK 260 (487)
Q Consensus 184 --~~~~i~~rl~~~~~~~~~~~~d~~lVN~Y~pg~gI~~H~D-~~~~~g~~IaslSLGs~~vm~F~~~~~~~~~~~v~L~ 260 (487)
.+..+++++.+.+....+ .||+|+||+|++|++|+||+| ++..||++|||||||++|+|.|++....+..++|.|+
T Consensus 83 P~~L~~l~~~~~~~~g~~~~-~pn~~LvN~Y~~G~~i~~H~D~~e~~~~~pI~svSLG~~~~f~f~~~~~~~~~~~i~L~ 161 (211)
T 3i3q_A 83 PQSFHNLCQRAATAAGYPDF-QPDACLINRYAPGAKLSLHQDKDEPDLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLE 161 (211)
T ss_dssp CHHHHHHHHHHHHHTTCTTC-CCCEEEEEEECTTCCEEEECCCCCSCTTSCEEEEEEESCEEEEECCSSTTSCCEEEEEC
T ss_pred HHHHHHHHHHHHHhcCCCCc-CCCEEEEEEEcCCCCcccccCCCccccCCCEEEEECCCCeEEEEecccCCCceEEEECC
Confidence 688888888764322233 479999999999999999999 5668899999999999999999987655678999999
Q ss_pred CCcEEeecccccccccccccccccCC---CCCcccc-cCccccc
Q psy941 261 QRSLYVMKDDARYKFTHEVLENEKSY---FGDLRFK-TFPLIHS 300 (487)
Q Consensus 261 ~gSLlVm~G~aRy~w~H~Ip~~~~d~---~~g~RIs-TfR~~~~ 300 (487)
+||||||+|++|+ |+|+|++.+.+. .+++||| |||++..
T Consensus 162 ~GsllvM~G~~r~-~~H~I~~~~~~~~p~~~~~RIsLTFR~~~~ 204 (211)
T 3i3q_A 162 HGDVVVWGGESRL-FYHGIQPLKAGFHPLTIDCRYNLTFRQAGK 204 (211)
T ss_dssp TTCEEEECGGGTT-CCEEECCCCCCCBTTTBTCEEEEEEECCSC
T ss_pred CCCEEEECchHHc-eEeccCcccCCcCCCCCCCEEEEEeeeccC
Confidence 9999999999998 889999988643 3578999 9999986
No 4
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=99.96 E-value=9.5e-30 Score=243.17 Aligned_cols=163 Identities=16% Similarity=0.206 Sum_probs=129.7
Q ss_pred CCC-eEEEcCCCCHHHHHHHHHHHHHHhhc---c----------------c--cccCCCCcCCCCcccccCCCCchhhHH
Q psy941 130 LSN-MLVINDFLSAEEEQSLLKEINQFIKR---Q----------------R--YEYDHWDDAIHGFRETERSKWNEENTK 187 (487)
Q Consensus 130 ~~G-l~~ipdfls~~Ee~~Ll~~i~~~l~r---r----------------r--y~~~~w~~~i~g~r~~~~~~w~~~~~~ 187 (487)
.+| .+++++||+++|++.|+++|.+.++. + + |.-..+.+.++|... ...+|++.+..
T Consensus 8 ~~~~~~~~~~~l~~~~a~~l~~~l~~~~~w~~~~~~~~~~~gk~~~~pR~~~wyg~~~~~Y~Ysg~~~-~~~pwp~~L~~ 86 (204)
T 3s57_A 8 AEGLDSSYTVLFGKAEADEIFQELEKEVEYFTGALARVQVFGKWHSVPRKQATYGDAGLTYTFSGLTL-SPKPWIPVLER 86 (204)
T ss_dssp ETTEEEEEEECSCHHHHHHHHHHHHHHCCCCCGGGGEEEETTEEEECSSEEEEEECTTCCEEETTEEE-CCEECCHHHHH
T ss_pred eCCceEEecCcCCHHHHHHHHHHHHHhCCCCCcccceEEECCeEeccCcEEEEECCCCCCcccCCCcc-cCCCCCHHHHH
Confidence 466 68899999999999999999875333 1 1 211112223344332 34689999999
Q ss_pred HHHHHHhhcCCCCCCCCCeEEEeecCCCC-CCcCCCCCCCc--cCCeEEEEecCCCeEEEEEecCCC-------CeEEEE
Q psy941 188 IIARVQNLAFPPNVTPIQYVHVLDLEQKG-YIKAHVDSVRF--CGNTIAGLSLLSDSVMKLVDEKTK-------TQEILV 257 (487)
Q Consensus 188 i~~rl~~~~~~~~~~~~d~~lVN~Y~pg~-gI~~H~D~~~~--~g~~IaslSLGs~~vm~F~~~~~~-------~~~~~v 257 (487)
+.+++.+.. +. .||+|+||+|++|+ +|+||+|++.. ++++|||||||++|+|.|++.... ...++|
T Consensus 87 l~~~~~~~~-g~---~~n~~LvN~Y~~G~d~i~~H~D~~~~~~~~~~IasvSLG~~~~f~~~~~~~~~~~~~~~~~~~~~ 162 (204)
T 3s57_A 87 IRDHVSGVT-GQ---TFNFVLINRYKDGSDHICEHRDDERELAPGSPIASVSFGASRDFVFRHKDSRGKSPSRRVAVVRL 162 (204)
T ss_dssp HHHHHHHHH-CC---CCSEEEEEEESSTTCCEEEECCCCTTBCTTCCEEEEEEESCEEEEEEEGGGCSSSCSCCCCCEEE
T ss_pred HHHHHHHHh-CC---CCceeEEEEECCCCCcccceecChhhccCCCcEEEEECCCceEEEEEEcCCCccccccCCceEEE
Confidence 999987642 22 48999999999998 99999999876 468999999999999999987432 247899
Q ss_pred EecCCcEEeecccccccccccccccccCCCCCcccc-cCcccc
Q psy941 258 LLKQRSLYVMKDDARYKFTHEVLENEKSYFGDLRFK-TFPLIH 299 (487)
Q Consensus 258 ~L~~gSLlVm~G~aRy~w~H~Ip~~~~d~~~g~RIs-TfR~~~ 299 (487)
.|++||||||+|++|+.|+|+|++++. ..++||| |||++.
T Consensus 163 ~L~~GsllvM~g~~q~~w~H~Ip~~~~--~~~~RislTFR~i~ 203 (204)
T 3s57_A 163 PLAHGSLLMMNHPTNTHWYHSLPVRKK--VLAPRVNLTFRKIL 203 (204)
T ss_dssp EECTTEEEEEETTHHHHEEEEECCCTT--CCSCEEEEEEECBC
T ss_pred ECCCCCEEEECchhhheeEeeccccCC--CCCCEEEEEeeeec
Confidence 999999999999999999999999875 6799999 999874
No 5
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=99.95 E-value=6.9e-28 Score=246.74 Aligned_cols=160 Identities=21% Similarity=0.294 Sum_probs=122.9
Q ss_pred cccccccccccceeecCCCCCHHHHHHHHHHHHHHh-----------hcccccccCCCcCCCCcccc------c-cCchh
Q psy941 317 CDGAVKSSILSNMLVINDFLSAEEEQSLLKEINQFI-----------KRQRYEYDHWDDAIHGFRET------E-RSKWN 378 (487)
Q Consensus 317 Cd~~~~~~~~~Gl~~~pdfis~~Ee~~Ll~~l~~~l-----------~rrry~~~~w~~~~~~y~~~------~-~~pwp 378 (487)
|.......+++|++|++||||++||+.|++.|++.- +.|+-. .|... ..|+.. + ..+||
T Consensus 101 ~~~~~~~~lp~Gl~~~p~fis~~Ee~~Ll~~i~w~~~~~~~~~~~~l~~Rr~~--~yG~~-Y~Ys~~~~~~~~p~p~~~P 177 (345)
T 3tht_A 101 WKELRPQALPPGLMVVEEIISSEEEKMLLESVDWTEDTDNQNSQKSLKHRRVK--HFGYE-FHYENNNVDKDKPLSGGLP 177 (345)
T ss_dssp EEEEECCSCCTTEEEETTCSCHHHHHHHHTTCC----------------CEEE--CCC-------------------CCC
T ss_pred ccccccccCCCceEEEcCcCCHHHHHHHHHhcccCCccccccCcccccCceEE--EECCc-ccccccccccCCCCCcCcC
Confidence 344556778999999999999999999999997641 112111 11110 012211 1 24699
Q ss_pred hhHHHHHHHHHhhcCCCCCCCCCeEEEeccCCCCCcccCCCCCcccCCceEEEecCCceEEEEEecCCCCeEEEEEeCCC
Q psy941 379 EENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQR 458 (487)
Q Consensus 379 ~~l~~ll~rl~~~~~~~~~~~~n~~liN~Y~pG~gI~~H~D~~~~~g~~IaslSLGs~~vm~F~~~~~~~~~~~v~L~~r 458 (487)
+++..+++++.+..+.. ..||+|+||+|++|++|+||+|+++.||++|++||||++++|.|+++. +..+++.|++|
T Consensus 178 ~~L~~l~~r~~~~~~~~--~~~n~~lvN~Y~~G~~I~~H~D~~~~~~~~I~slSLG~~~~f~f~~~~--~~~~~l~L~~g 253 (345)
T 3tht_A 178 DICESFLEKWLRKGYIK--HKPDQMTINQYEPGQGIPAHIDTHSAFEDEIVSLSLGSEIVMDFKHPD--GIAVPVMLPRR 253 (345)
T ss_dssp HHHHHHHHHHHHHTSCS--SCCSEEEEEEECTTCCEEEECCCTTTBCSCEEEEEESSCEEEEEECTT--SCEEEEEECTT
T ss_pred HHHHHHHHHHHhcccCC--CCCCEEEEEEecCCCCEeeccCCchhcCCeEEEEECCCceeEEEccCC--CceEEEEcCCC
Confidence 99999999987643322 369999999999999999999999899999999999999999999875 35789999999
Q ss_pred cEEEeccccccccccccccCCcccc
Q psy941 459 SLYVMKDDARYKFTHEVLENESLDC 483 (487)
Q Consensus 459 SLlvmsG~aRy~w~HgI~~~~~~~~ 483 (487)
|||||+|++|+.|+|+|++++...+
T Consensus 254 sLlvM~G~~r~~w~H~I~~~~~d~~ 278 (345)
T 3tht_A 254 SLLVMTGESRYLWTHGITCRKFDTV 278 (345)
T ss_dssp EEEEECTHHHHTSEEEECCCSEEEE
T ss_pred cEEEEChHHhhceEccCCcccCCcc
Confidence 9999999999999999999998653
No 6
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=99.94 E-value=6.1e-27 Score=228.76 Aligned_cols=151 Identities=13% Similarity=0.226 Sum_probs=119.7
Q ss_pred ccceeecCCCCCHHHHHHHHHHHHHHhhccc-----ccc-------cCCCcC-CCCccc---cccCchhhhHHHHHHHHH
Q psy941 326 LSNMLVINDFLSAEEEQSLLKEINQFIKRQR-----YEY-------DHWDDA-IHGFRE---TERSKWNEENTKIIARVQ 389 (487)
Q Consensus 326 ~~Gl~~~pdfis~~Ee~~Ll~~l~~~l~rrr-----y~~-------~~w~~~-~~~y~~---~~~~pwp~~l~~ll~rl~ 389 (487)
++|+.|+++||+++||+.|++.|.+.++++. |+. ..|-.. ...|+. ...++||+.+..++++++
T Consensus 39 i~gl~~~~~fl~~~e~~~Ll~~l~~~~~w~~~~~~~~g~~~~~~R~~~~~g~~~Y~Ys~~~~~~~p~wp~~l~~l~~~~~ 118 (238)
T 2iuw_A 39 VSRVCLYPGFVDVKEADWILEQLCQDVPWKQRTGIREDITYQQPRLTAWYGELPYTYSRITMEPNPHWHPVLRTLKNRIE 118 (238)
T ss_dssp CEEEEEETTSSCHHHHHHHHHHHHHHSCCBCCEEESSSCEEECSSEEEEEECCCTTSCHHHHCCBSSCCHHHHHHHHHHH
T ss_pred CCcEEEECCCCCHHHHHHHHHHHHHhCCCccCceecCCcccccCCeeEEcCCCccccCCcccCCCCCCCHHHHHHHHHHH
Confidence 4579999999999999999999987544331 110 011111 112322 234589999999999988
Q ss_pred hhcCCCCCCCCCeEEEeccCCCC-CcccCCCCCcccC--CceEEEecCCceEEEEEecCCC--------CeEEEEEeCCC
Q psy941 390 NLAFPPNVTPIQYVHVLDLEQKG-YIKAHVDSVRFCG--NTIAGLSLLSDSVMKLVDEKTK--------TQEILVLLKQR 458 (487)
Q Consensus 390 ~~~~~~~~~~~n~~liN~Y~pG~-gI~~H~D~~~~~g--~~IaslSLGs~~vm~F~~~~~~--------~~~~~v~L~~r 458 (487)
+... ..||+|+||+|++|+ +|+||+|++..|| ++||+||||++|+|.|+++... ...++|.|++|
T Consensus 119 ~~~g----~~~n~~LvN~Y~~G~d~i~~H~D~~~~~~~~~~IaslSLG~~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~g 194 (238)
T 2iuw_A 119 ENTG----HTFNSLLCNLYRNEKDSVDWHSDDEPSLGRCPIIASLSFGATRTFEMRKKPPPEENGDYTYVERVKIPLDHG 194 (238)
T ss_dssp HHHS----CCCCEEEEEEECSTTCCEEEECCCCGGGCSSCCEEEEEEESCEEEEEEECCC--------CCCEEEEEECTT
T ss_pred HHhC----CCCCEEEEEEECCCCCceeCCcCChhhcCCCCcEEEEECCCCEEEEEeccCCccccCcccCCceEEEEcCCC
Confidence 7642 259999999999996 9999999999999 7999999999999999997531 35899999999
Q ss_pred cEEEeccccccccccccccCCc
Q psy941 459 SLYVMKDDARYKFTHEVLENES 480 (487)
Q Consensus 459 SLlvmsG~aRy~w~HgI~~~~~ 480 (487)
|||||.|++|+.|+|+|++++.
T Consensus 195 sllvM~G~~r~~w~H~I~~~~~ 216 (238)
T 2iuw_A 195 TLLIMEGATQADWQHRVPKEYH 216 (238)
T ss_dssp CEEEEEETHHHHEEEEECCCSS
T ss_pred CEEEEChhhhCccEecCCCcCC
Confidence 9999999999999999999753
No 7
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=99.93 E-value=1.1e-25 Score=215.01 Aligned_cols=151 Identities=15% Similarity=0.191 Sum_probs=119.6
Q ss_pred ccc-eeecCCCCCHHHHHHHHHHHHHHhhc---c--------------cccccCCCcCCC-Cccc--cccCchhhhHHHH
Q psy941 326 LSN-MLVINDFLSAEEEQSLLKEINQFIKR---Q--------------RYEYDHWDDAIH-GFRE--TERSKWNEENTKI 384 (487)
Q Consensus 326 ~~G-l~~~pdfis~~Ee~~Ll~~l~~~l~r---r--------------ry~~~~w~~~~~-~y~~--~~~~pwp~~l~~l 384 (487)
.+| -+++++||+++|++.|++.|.+.+++ + |...++.+.... .|+. ....+||+.+..+
T Consensus 8 ~~~~~~~~~~~l~~~~a~~l~~~l~~~~~w~~~~~~~~~~~gk~~~~pR~~~wyg~~~~~Y~Ysg~~~~~~pwp~~L~~l 87 (204)
T 3s57_A 8 AEGLDSSYTVLFGKAEADEIFQELEKEVEYFTGALARVQVFGKWHSVPRKQATYGDAGLTYTFSGLTLSPKPWIPVLERI 87 (204)
T ss_dssp ETTEEEEEEECSCHHHHHHHHHHHHHHCCCCCGGGGEEEETTEEEECSSEEEEEECTTCCEEETTEEECCEECCHHHHHH
T ss_pred eCCceEEecCcCCHHHHHHHHHHHHHhCCCCCcccceEEECCeEeccCcEEEEECCCCCCcccCCCcccCCCCCHHHHHH
Confidence 457 57899999999999999999887555 2 122222222111 1221 1346899999999
Q ss_pred HHHHHhhcCCCCCCCCCeEEEeccCCCC-CcccCCCCCcc--cCCceEEEecCCceEEEEEecCCC-------CeEEEEE
Q psy941 385 IARVQNLAFPPNVTPIQYVHVLDLEQKG-YIKAHVDSVRF--CGNTIAGLSLLSDSVMKLVDEKTK-------TQEILVL 454 (487)
Q Consensus 385 l~rl~~~~~~~~~~~~n~~liN~Y~pG~-gI~~H~D~~~~--~g~~IaslSLGs~~vm~F~~~~~~-------~~~~~v~ 454 (487)
++++++... ..||+|+||+|++|+ +|+||+|++.. ++++||+||||++|+|.|+++... ...+++.
T Consensus 88 ~~~~~~~~g----~~~n~~LvN~Y~~G~d~i~~H~D~~~~~~~~~~IasvSLG~~~~f~~~~~~~~~~~~~~~~~~~~~~ 163 (204)
T 3s57_A 88 RDHVSGVTG----QTFNFVLINRYKDGSDHICEHRDDERELAPGSPIASVSFGASRDFVFRHKDSRGKSPSRRVAVVRLP 163 (204)
T ss_dssp HHHHHHHHC----CCCSEEEEEEESSTTCCEEEECCCCTTBCTTCCEEEEEEESCEEEEEEEGGGCSSSCSCCCCCEEEE
T ss_pred HHHHHHHhC----CCCceeEEEEECCCCCcccceecChhhccCCCcEEEEECCCceEEEEEEcCCCccccccCCceEEEE
Confidence 999987543 269999999999998 99999999876 468999999999999999987422 2478999
Q ss_pred eCCCcEEEeccccccccccccccCCc
Q psy941 455 LKQRSLYVMKDDARYKFTHEVLENES 480 (487)
Q Consensus 455 L~~rSLlvmsG~aRy~w~HgI~~~~~ 480 (487)
|++||||||+|++|+.|+|+|++++.
T Consensus 164 L~~GsllvM~g~~q~~w~H~Ip~~~~ 189 (204)
T 3s57_A 164 LAHGSLLMMNHPTNTHWYHSLPVRKK 189 (204)
T ss_dssp ECTTEEEEEETTHHHHEEEEECCCTT
T ss_pred CCCCCEEEECchhhheeEeeccccCC
Confidence 99999999999999999999999884
No 8
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=99.92 E-value=3.6e-25 Score=212.22 Aligned_cols=156 Identities=14% Similarity=0.211 Sum_probs=120.2
Q ss_pred cccccceeecCCCCCHHHHHHHHHHHHHHh-----hcc----c------cc---ccCCCcCCCCcc--ccc---cCchhh
Q psy941 323 SSILSNMLVINDFLSAEEEQSLLKEINQFI-----KRQ----R------YE---YDHWDDAIHGFR--ETE---RSKWNE 379 (487)
Q Consensus 323 ~~~~~Gl~~~pdfis~~Ee~~Ll~~l~~~l-----~rr----r------y~---~~~w~~~~~~y~--~~~---~~pwp~ 379 (487)
..+.||+.++++|+. ++++.|+++|++.. ++. + .+ ..+|.....+|+ ... ..+||+
T Consensus 3 ~~~~~g~~~~~~~~~-~~~~~l~~~~~~~~~~~p~~~~~~pgg~~~s~~~~~~g~~~W~~d~~~Y~Ys~~~~~~~~pw~~ 81 (211)
T 3i3q_A 3 EPLAAGAVILRRFAF-NAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTNCGHLGWTTHRQGYLYSPIDPQTNKPWPA 81 (211)
T ss_dssp CCCBTTBEEETTTTT-TTHHHHHHHHHHHHHHSCCBCCBCTTSCBCSSEEEEESSBEEEEETTEEEEESBCTTTSSBCCC
T ss_pred eecCCCCEEECCcCh-HHHHHHHHHHHHHHhcCCCceeEcCCCCcCchhhcccccceeecCCCCcCcCCCccCCCCCCCc
Confidence 457789999999998 68889999998742 122 1 11 125543223343 222 356776
Q ss_pred ---hHHHHHHHHHhhcCCCCCCCCCeEEEeccCCCCCcccCCC-CCcccCCceEEEecCCceEEEEEecCCCCeEEEEEe
Q psy941 380 ---ENTKIIARVQNLAFPPNVTPIQYVHVLDLEQKGYIKAHVD-SVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLL 455 (487)
Q Consensus 380 ---~l~~ll~rl~~~~~~~~~~~~n~~liN~Y~pG~gI~~H~D-~~~~~g~~IaslSLGs~~vm~F~~~~~~~~~~~v~L 455 (487)
++..+++++........ ..||+|+||+|++|++|+||+| ++..||++|++||||++|+|.|++....+...++.|
T Consensus 82 ~P~~L~~l~~~~~~~~g~~~-~~pn~~LvN~Y~~G~~i~~H~D~~e~~~~~pI~svSLG~~~~f~f~~~~~~~~~~~i~L 160 (211)
T 3i3q_A 82 MPQSFHNLCQRAATAAGYPD-FQPDACLINRYAPGAKLSLHQDKDEPDLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLL 160 (211)
T ss_dssp CCHHHHHHHHHHHHHTTCTT-CCCCEEEEEEECTTCCEEEECCCCCSCTTSCEEEEEEESCEEEEECCSSTTSCCEEEEE
T ss_pred hHHHHHHHHHHHHHhcCCCC-cCCCEEEEEEEcCCCCcccccCCCccccCCCEEEEECCCCeEEEEecccCCCceEEEEC
Confidence 78888888876542121 2579999999999999999999 576899999999999999999998755566889999
Q ss_pred CCCcEEEeccccccccccccccCCcc
Q psy941 456 KQRSLYVMKDDARYKFTHEVLENESL 481 (487)
Q Consensus 456 ~~rSLlvmsG~aRy~w~HgI~~~~~~ 481 (487)
++|||+||+|++|+ |+|+|++++..
T Consensus 161 ~~GsllvM~G~~r~-~~H~I~~~~~~ 185 (211)
T 3i3q_A 161 EHGDVVVWGGESRL-FYHGIQPLKAG 185 (211)
T ss_dssp CTTCEEEECGGGTT-CCEEECCCCCC
T ss_pred CCCCEEEECchHHc-eEeccCcccCC
Confidence 99999999999998 88999999864
No 9
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=97.47 E-value=0.00036 Score=66.61 Aligned_cols=150 Identities=17% Similarity=0.168 Sum_probs=92.8
Q ss_pred ccCCCeEEEcCCCCHHHHHHHHHHHHHHhhccccccCCCCcCCCCcccccCCCCc---hhhHHHHHHHHhhcCCCCCCCC
Q psy941 128 SILSNMLVINDFLSAEEEQSLLKEINQFIKRQRYEYDHWDDAIHGFRETERSKWN---EENTKIIARVQNLAFPPNVTPI 204 (487)
Q Consensus 128 ~~~~Gl~~ipdfls~~Ee~~Ll~~i~~~l~rrry~~~~w~~~i~g~r~~~~~~w~---~~~~~i~~rl~~~~~~~~~~~~ 204 (487)
..-|.+.+++||||++|.+.|++.....+++.+.... ...+.+|... ..|. +....|.+|+.+....+ ....
T Consensus 36 ~~~P~i~~~~~fLs~~Ec~~Li~~a~~~l~~s~v~~~---~~~~~~RtS~-~~wl~~~~~v~~i~~Ri~~~~gl~-~~~~ 110 (216)
T 3itq_A 36 FEEPLIVVLGNVLSDEECDELIELSKSKLARSKVGSS---RDVNDIRTSS-GAFLDDNELTAKIEKRISSIMNVP-ASHG 110 (216)
T ss_dssp ETTTTEEEEESCSCHHHHHHHHHHHHHHHC-----------CCCCGGGTT-CEECCCCHHHHHHHHHHHHHHTSC-GGGB
T ss_pred eCCCCEEEECCcCCHHHHHHHHHHhhcccccceeccC---CccCCcEeee-eEEeCCcHHHHHHHHHHHHhcCce-eccc
Confidence 3469999999999999999999999876665542111 1223445422 2233 33556677776643211 1113
Q ss_pred CeEEEeecCCCCCCcCCCCCCCc-----cCCeEEEEec-------CCCeEEEEEecCCCCeEEEEEecCCcEEeecc---
Q psy941 205 QYVHVLDLEQKGYIKAHVDSVRF-----CGNTIAGLSL-------LSDSVMKLVDEKTKTQEILVLLKQRSLYVMKD--- 269 (487)
Q Consensus 205 d~~lVN~Y~pg~gI~~H~D~~~~-----~g~~IaslSL-------Gs~~vm~F~~~~~~~~~~~v~L~~gSLlVm~G--- 269 (487)
+...|..|.+|+.-.+|.|.... .|..++++-+ |+..+| +...+.|....|+++++..
T Consensus 111 E~lqv~~Y~~G~~y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~F-------p~~~~~V~P~~G~al~f~~~~~ 183 (216)
T 3itq_A 111 EGLHILNYEVDQQYKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETFF-------PKLNLSVHPRKGMAVYFEYFYQ 183 (216)
T ss_dssp CCCEEEEECBTCCEEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEEE-------TTTTEEECCCTTCEEEEECCCS
T ss_pred cceeEEEeCCCCccccccCCCcCCCcccCCceEEEEEEecccCCcCceeEe-------cCCCCEEecCCCeEEEEeccCC
Confidence 46778999999999999997432 3556665542 222222 0124678888999999974
Q ss_pred --cccccccccccccccCCCCCcccc
Q psy941 270 --DARYKFTHEVLENEKSYFGDLRFK 293 (487)
Q Consensus 270 --~aRy~w~H~Ip~~~~d~~~g~RIs 293 (487)
+......|++.++. .|.|+.
T Consensus 184 ~g~~d~~~lH~~~PV~----~G~K~v 205 (216)
T 3itq_A 184 DQSLNELTLHGGAPVT----KGEKWI 205 (216)
T ss_dssp SHHHHHTTCEEECCEE----ESCEEE
T ss_pred CCCCCCccccccceec----cccEEE
Confidence 22345569998864 567776
No 10
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=97.02 E-value=0.0014 Score=62.39 Aligned_cols=161 Identities=14% Similarity=0.162 Sum_probs=95.9
Q ss_pred cccCCCeEEEcCCCCHHHHHHHHHHHHHHhhccccccCCCCc-CCCCcccccCCCCc-----hhhHHHHHHHHhhcCCCC
Q psy941 127 SSILSNMLVINDFLSAEEEQSLLKEINQFIKRQRYEYDHWDD-AIHGFRETERSKWN-----EENTKIIARVQNLAFPPN 200 (487)
Q Consensus 127 ~~~~~Gl~~ipdfls~~Ee~~Ll~~i~~~l~rrry~~~~w~~-~i~g~r~~~~~~w~-----~~~~~i~~rl~~~~~~~~ 200 (487)
...-|-+.+++||||++|.+.|++.+...+++.......... ..+.+|... ..|. +....|.+|+.+....+
T Consensus 16 ls~~P~i~~~~~fLs~~Ec~~li~~~~~~~~~s~v~~~~~g~~~~~~~R~s~-~~~l~~~~~~~~~~i~~ri~~~~gl~- 93 (224)
T 2jig_A 16 LSWSPRAFLLKNFLSDEECDYIVEKARPKMVKSSVVDNESGKSVDSEIRTST-GTWFAKGEDSVISKIEKRVAQVTMIP- 93 (224)
T ss_dssp EETTTTEEEETTCSCHHHHHHHHHHHGGGCEECEEEETTTTEEEECSSBCSE-EEECCTTCSHHHHHHHHHHHHHHTCC-
T ss_pred EeCCCCEEEEcccCCHHHHHHHHHHhhccCeeeeeecCCCCcccccCCEEEe-eeEecCCCCHHHHHHHHHHHHHhCCC-
Confidence 355688999999999999999999998755443311110000 012233311 1132 23456777776643221
Q ss_pred CCCCCeEEEeecCCCCCCcCCCCCCC--------ccCCeEEEEe-------cCCCeEEEEEecCC--------CCeEEEE
Q psy941 201 VTPIQYVHVLDLEQKGYIKAHVDSVR--------FCGNTIAGLS-------LLSDSVMKLVDEKT--------KTQEILV 257 (487)
Q Consensus 201 ~~~~d~~lVN~Y~pg~gI~~H~D~~~--------~~g~~IaslS-------LGs~~vm~F~~~~~--------~~~~~~v 257 (487)
......+.|+.|.+|+.-.+|.|... ..|..++++- -|+..+|....... ....+.|
T Consensus 94 ~~~~e~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~c~~~~~~V 173 (224)
T 2jig_A 94 LENHEGLQVLHYHDGQKYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNAEQKVTGDGWSECAKRGLAV 173 (224)
T ss_dssp GGGBCCCEEEEEETTCCEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETTSSSCCCSTTSCTTGGGSEEE
T ss_pred cccccceEEEecCCCccccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCCcccccccccccccccCceEE
Confidence 11234678899999999999999732 1245666654 24444442110000 0025789
Q ss_pred EecCCcEEeec-----ccccccccccccccccCCCCCcccc
Q psy941 258 LLKQRSLYVMK-----DDARYKFTHEVLENEKSYFGDLRFK 293 (487)
Q Consensus 258 ~L~~gSLlVm~-----G~aRy~w~H~Ip~~~~d~~~g~RIs 293 (487)
..+.|+++++. |..-....|++.++. .|.|+.
T Consensus 174 ~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~----~G~K~~ 210 (224)
T 2jig_A 174 KPIKGDALMFYSLKPDGSNDPASLHGSCPTL----KGDKWS 210 (224)
T ss_dssp CCCTTCEEEEESBCTTSCBCGGGCEEECCEE----ESEEEE
T ss_pred ecccCcEEEEEeeCCCCCCCCCCcccCCccc----cceEEE
Confidence 99999999994 444456679998863 567776
No 11
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=96.91 E-value=0.0028 Score=60.46 Aligned_cols=143 Identities=18% Similarity=0.197 Sum_probs=84.8
Q ss_pred cccceeecCCCCCHHHHHHHHHHHHHHhhcccccccCCCcCCCCccccccCch---hhhHHHHHHHHHhhcCCCCCCCCC
Q psy941 325 ILSNMLVINDFLSAEEEQSLLKEINQFIKRQRYEYDHWDDAIHGFRETERSKW---NEENTKIIARVQNLAFPPNVTPIQ 401 (487)
Q Consensus 325 ~~~Gl~~~pdfis~~Ee~~Ll~~l~~~l~rrry~~~~w~~~~~~y~~~~~~pw---p~~l~~ll~rl~~~~~~~~~~~~n 401 (487)
.-|.+.+++||||++|.+.|++.....+++...+.. .....+|... .-| .+....|.+|+.+..... .....
T Consensus 37 ~~P~i~~~~~fLs~~Ec~~Li~~a~~~l~~s~v~~~---~~~~~~RtS~-~~wl~~~~~v~~i~~Ri~~~~gl~-~~~~E 111 (216)
T 3itq_A 37 EEPLIVVLGNVLSDEECDELIELSKSKLARSKVGSS---RDVNDIRTSS-GAFLDDNELTAKIEKRISSIMNVP-ASHGE 111 (216)
T ss_dssp TTTTEEEEESCSCHHHHHHHHHHHHHHHC-----------CCCCGGGTT-CEECCCCHHHHHHHHHHHHHHTSC-GGGBC
T ss_pred CCCCEEEECCcCCHHHHHHHHHHhhcccccceeccC---CccCCcEeee-eEEeCCcHHHHHHHHHHHHhcCce-ecccc
Confidence 467899999999999999999998776554322111 1112233211 123 334556777777665432 01234
Q ss_pred eEEEeccCCCCCcccCCCCCcc-----cCCceEEEec-------CCceEEEEEecCCCCeEEEEEeCCCcEEEecc----
Q psy941 402 YVHVLDLEQKGYIKAHVDSVRF-----CGNTIAGLSL-------LSDSVMKLVDEKTKTQEILVLLKQRSLYVMKD---- 465 (487)
Q Consensus 402 ~~liN~Y~pG~gI~~H~D~~~~-----~g~~IaslSL-------Gs~~vm~F~~~~~~~~~~~v~L~~rSLlvmsG---- 465 (487)
.+.+..|.+|+...||.|.-.. .|..++++-+ |+..+|. ...+.|.-..|+++++..
T Consensus 112 ~lqv~~Y~~G~~y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp-------~~~~~V~P~~G~al~f~~~~~~ 184 (216)
T 3itq_A 112 GLHILNYEVDQQYKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETFFP-------KLNLSVHPRKGMAVYFEYFYQD 184 (216)
T ss_dssp CCEEEEECBTCCEEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEEET-------TTTEEECCCTTCEEEEECCCSS
T ss_pred ceeEEEeCCCCccccccCCCcCCCcccCCceEEEEEEecccCCcCceeEec-------CCCCEEecCCCeEEEEeccCCC
Confidence 6788999999999999997432 2445544322 2222220 124678888999999874
Q ss_pred -ccccccccccccCC
Q psy941 466 -DARYKFTHEVLENE 479 (487)
Q Consensus 466 -~aRy~w~HgI~~~~ 479 (487)
+......|+..+..
T Consensus 185 g~~d~~~lH~~~PV~ 199 (216)
T 3itq_A 185 QSLNELTLHGGAPVT 199 (216)
T ss_dssp HHHHHTTCEEECCEE
T ss_pred CCCCCccccccceec
Confidence 22334568877653
No 12
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=96.41 E-value=0.0069 Score=58.75 Aligned_cols=145 Identities=12% Similarity=0.073 Sum_probs=83.7
Q ss_pred cCCCeEEEcCCCCHHHHHHHHHHHHHHhhccccccCCCCcC-------CCCcccc-cCCCCchhhHHHHHHHHhhcCCCC
Q psy941 129 ILSNMLVINDFLSAEEEQSLLKEINQFIKRQRYEYDHWDDA-------IHGFRET-ERSKWNEENTKIIARVQNLAFPPN 200 (487)
Q Consensus 129 ~~~Gl~~ipdfls~~Ee~~Ll~~i~~~l~rrry~~~~w~~~-------i~g~r~~-~~~~w~~~~~~i~~rl~~~~~~~~ 200 (487)
...++..|+||||++|.++|++.+.+ ..|..+ ...+|.. .+..-.+....+.+++.+.. ...
T Consensus 17 ~~~~i~~i~dvLs~~Ec~~li~~~e~---------~~~~dg~~t~g~~~~~vr~n~~l~~d~~~~~~l~~~i~~~l-~~~ 86 (243)
T 3dkq_A 17 FQGMLIEIPNVFSKQEVSHLREQLDA---------RRWIDGNQTSGAMATTRKRNQQLDKDDPVAVALGQQIMDRL-LAH 86 (243)
T ss_dssp CBTTBEEECCSSCHHHHHHHHHHHHT---------SCCEEECCCSSBSSCCCEEEEECCTTCHHHHHHHHHHHHHH-HTC
T ss_pred cCCCEEEECCCCCHHHHHHHHHHHhh---------CCCccCcccCCCccccceeeeEECCCCHHHHHHHHHHHHHH-ccC
Confidence 45789999999999999999999874 222211 0111211 11111123455666665532 111
Q ss_pred --C------CCCCeEEEeecCCCCCCcCCCCCCCcc--C---CeEEEE--ecCCC-----eEEEEEecCCCCeEEEEEec
Q psy941 201 --V------TPIQYVHVLDLEQKGYIKAHVDSVRFC--G---NTIAGL--SLLSD-----SVMKLVDEKTKTQEILVLLK 260 (487)
Q Consensus 201 --~------~~~d~~lVN~Y~pg~gI~~H~D~~~~~--g---~~Iasl--SLGs~-----~vm~F~~~~~~~~~~~v~L~ 260 (487)
+ .......++.|.+|+...+|+|....- | ..++++ =|-.+ --+.|... .....|..+
T Consensus 87 ~~f~~~~L~~~~e~~~~~rY~~G~~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~---~~~~~V~P~ 163 (243)
T 3dkq_A 87 PQFVSAALPLQFYPPLFNRYQGGETFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDT---YGQQSIKLS 163 (243)
T ss_dssp HHHHHHHCEEEEEEEEEEEECTTCEEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEET---TEEEEECCC
T ss_pred cchhhcccccccccceEEEECCCCeeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeC---CCcEEEecC
Confidence 1 012248899999999999999985321 1 112221 12111 11222222 124678899
Q ss_pred CCcEEeecccccccccccccccccCCCCCcccc-c
Q psy941 261 QRSLYVMKDDARYKFTHEVLENEKSYFGDLRFK-T 294 (487)
Q Consensus 261 ~gSLlVm~G~aRy~w~H~Ip~~~~d~~~g~RIs-T 294 (487)
.|+++++... ..|++.++. .|.|++ |
T Consensus 164 ~G~~v~F~s~----~lH~v~pV~----~G~R~~~~ 190 (243)
T 3dkq_A 164 AGSLVLYPSS----SLHQVTPVL----SGERTAAF 190 (243)
T ss_dssp TTCEEEEETT----SEEEECCEE----EECEEEEE
T ss_pred CCEEEEECCC----CeEcCcccc----ccCEEEEE
Confidence 9999999764 579999863 567777 5
No 13
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=96.29 E-value=0.009 Score=56.68 Aligned_cols=154 Identities=14% Similarity=0.164 Sum_probs=87.4
Q ss_pred cccccceeecCCCCCHHHHHHHHHHHHHHhhcccccccC-CCcCCCCccccccCch-----hhhHHHHHHHHHhhcCCCC
Q psy941 323 SSILSNMLVINDFLSAEEEQSLLKEINQFIKRQRYEYDH-WDDAIHGFRETERSKW-----NEENTKIIARVQNLAFPPN 396 (487)
Q Consensus 323 ~~~~~Gl~~~pdfis~~Ee~~Ll~~l~~~l~rrry~~~~-w~~~~~~y~~~~~~pw-----p~~l~~ll~rl~~~~~~~~ 396 (487)
...-|-+.+++||||++|.+.|++.....+++....... .......+|... .-| .+....|.+|+.+....+-
T Consensus 16 ls~~P~i~~~~~fLs~~Ec~~li~~~~~~~~~s~v~~~~~g~~~~~~~R~s~-~~~l~~~~~~~~~~i~~ri~~~~gl~~ 94 (224)
T 2jig_A 16 LSWSPRAFLLKNFLSDEECDYIVEKARPKMVKSSVVDNESGKSVDSEIRTST-GTWFAKGEDSVISKIEKRVAQVTMIPL 94 (224)
T ss_dssp EETTTTEEEETTCSCHHHHHHHHHHHGGGCEECEEEETTTTEEEECSSBCSE-EEECCTTCSHHHHHHHHHHHHHHTCCG
T ss_pred EeCCCCEEEEcccCCHHHHHHHHHHhhccCeeeeeecCCCCcccccCCEEEe-eeEecCCCCHHHHHHHHHHHHHhCCCc
Confidence 345577999999999999999999887633322110000 000011122211 112 1234567777776543320
Q ss_pred CCCCCeEEEeccCCCCCcccCCCCCcc--------cCCceEEEe-------cCCceEEEEEecCC--------CCeEEEE
Q psy941 397 VTPIQYVHVLDLEQKGYIKAHVDSVRF--------CGNTIAGLS-------LLSDSVMKLVDEKT--------KTQEILV 453 (487)
Q Consensus 397 ~~~~n~~liN~Y~pG~gI~~H~D~~~~--------~g~~IaslS-------LGs~~vm~F~~~~~--------~~~~~~v 453 (487)
.....+.++.|.+|+...+|.|.-.. -|..++++- -|+..+|....... ....+.|
T Consensus 95 -~~~e~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~c~~~~~~V 173 (224)
T 2jig_A 95 -ENHEGLQVLHYHDGQKYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNAEQKVTGDGWSECAKRGLAV 173 (224)
T ss_dssp -GGBCCCEEEEEETTCCEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETTSSSCCCSTTSCTTGGGSEEE
T ss_pred -ccccceEEEecCCCccccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCCcccccccccccccccCceEE
Confidence 12346788999999999999997321 234555533 24444442110000 0025789
Q ss_pred EeCCCcEEEec-----cccccccccccccC
Q psy941 454 LLKQRSLYVMK-----DDARYKFTHEVLEN 478 (487)
Q Consensus 454 ~L~~rSLlvms-----G~aRy~w~HgI~~~ 478 (487)
....|+++++. |..-....|+..+.
T Consensus 174 ~P~~G~al~f~~~~~~g~~d~~~lH~~~PV 203 (224)
T 2jig_A 174 KPIKGDALMFYSLKPDGSNDPASLHGSCPT 203 (224)
T ss_dssp CCCTTCEEEEESBCTTSCBCGGGCEEECCE
T ss_pred ecccCcEEEEEeeCCCCCCCCCCcccCCcc
Confidence 99999999984 44445666887765
No 14
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=95.12 E-value=0.065 Score=51.84 Aligned_cols=139 Identities=12% Similarity=0.077 Sum_probs=79.0
Q ss_pred cccccceeecCCCCCHHHHHHHHHHHHHHhhcccccccCCCcC-------CCCcccc-ccCchhhhHHHHHHHHHhhcCC
Q psy941 323 SSILSNMLVINDFLSAEEEQSLLKEINQFIKRQRYEYDHWDDA-------IHGFRET-ERSKWNEENTKIIARVQNLAFP 394 (487)
Q Consensus 323 ~~~~~Gl~~~pdfis~~Ee~~Ll~~l~~~l~rrry~~~~w~~~-------~~~y~~~-~~~pwp~~l~~ll~rl~~~~~~ 394 (487)
.....++.+++||||++|.++|++.++.. .|..+ ...++.. ....-.+....+.+++.+....
T Consensus 15 ~~~~~~i~~i~dvLs~~Ec~~li~~~e~~---------~~~dg~~t~g~~~~~vr~n~~l~~d~~~~~~l~~~i~~~l~~ 85 (243)
T 3dkq_A 15 LYFQGMLIEIPNVFSKQEVSHLREQLDAR---------RWIDGNQTSGAMATTRKRNQQLDKDDPVAVALGQQIMDRLLA 85 (243)
T ss_dssp CCCBTTBEEECCSSCHHHHHHHHHHHHTS---------CCEEECCCSSBSSCCCEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred cccCCCEEEECCCCCHHHHHHHHHHHhhC---------CCccCcccCCCccccceeeeEECCCCHHHHHHHHHHHHHHcc
Confidence 34556899999999999999999988641 22211 0112211 1111112345566666554311
Q ss_pred C-CC------CCCCeEEEeccCCCCCcccCCCCCccc--C---C----ceEEEec-----CCceEEEEEecCCCCeEEEE
Q psy941 395 P-NV------TPIQYVHVLDLEQKGYIKAHVDSVRFC--G---N----TIAGLSL-----LSDSVMKLVDEKTKTQEILV 453 (487)
Q Consensus 395 ~-~~------~~~n~~liN~Y~pG~gI~~H~D~~~~~--g---~----~IaslSL-----Gs~~vm~F~~~~~~~~~~~v 453 (487)
. .+ .......++.|.+|+...+|+|....- | . .+.-||- |+. +.|... .....|
T Consensus 86 ~~~f~~~~L~~~~e~~~~~rY~~G~~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGe--tvf~~~---~~~~~V 160 (243)
T 3dkq_A 86 HPQFVSAALPLQFYPPLFNRYQGGETFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGE--LVIQDT---YGQQSI 160 (243)
T ss_dssp CHHHHHHHCEEEEEEEEEEEECTTCEEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECC--EEEEET---TEEEEE
T ss_pred CcchhhcccccccccceEEEECCCCeeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCce--EEEeeC---CCcEEE
Confidence 1 00 012248899999999999999984321 1 1 1111221 122 223221 124678
Q ss_pred EeCCCcEEEeccccccccccccccCC
Q psy941 454 LLKQRSLYVMKDDARYKFTHEVLENE 479 (487)
Q Consensus 454 ~L~~rSLlvmsG~aRy~w~HgI~~~~ 479 (487)
..+.|+++++... ..|++.+..
T Consensus 161 ~P~~G~~v~F~s~----~lH~v~pV~ 182 (243)
T 3dkq_A 161 KLSAGSLVLYPSS----SLHQVTPVL 182 (243)
T ss_dssp CCCTTCEEEEETT----SEEEECCEE
T ss_pred ecCCCEEEEECCC----CeEcCcccc
Confidence 9999999999764 579888753
No 15
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=94.00 E-value=0.46 Score=45.77 Aligned_cols=157 Identities=18% Similarity=0.183 Sum_probs=81.6
Q ss_pred cCCCeEEEcCCCCHHHHHHHHHHHHHHhhccccccCCCCc----CCCCcccccCCCCc-------hh---hHHHHHHHHh
Q psy941 129 ILSNMLVINDFLSAEEEQSLLKEINQFIKRQRYEYDHWDD----AIHGFRETERSKWN-------EE---NTKIIARVQN 194 (487)
Q Consensus 129 ~~~Gl~~ipdfls~~Ee~~Ll~~i~~~l~rrry~~~~w~~----~i~g~r~~~~~~w~-------~~---~~~i~~rl~~ 194 (487)
...|..+++|||+++|.++|++.+........+.-..... ....+|... -.|. +. +...++++.+
T Consensus 24 ~~~g~~Vid~fLs~ee~~~L~~~~~~~~~~g~~~~a~i~~~~~~~~~~iR~d~-i~wl~~~~~~~~~~~~l~~~i~~l~~ 102 (247)
T 2hbt_A 24 NKHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDK-ITWIEGKEPGCETIGLLMSSMDDLIR 102 (247)
T ss_dssp HHTSEEEESSSSCHHHHHHHHHHHHHHHHTTCSCSCCEEECCSSSTTCEECCE-EEEECSCSTTCHHHHHHHHHHHHHHH
T ss_pred ccCCEEEECCCCCHHHHHHHHHHHHhhhhcCCccccccccccccccccccccc-eeeecccccchhHHHHHHHHHHHHHH
Confidence 3479999999999999999999998621111111010000 011122110 0111 11 2233444433
Q ss_pred hcCCCCCCCC-----CeEEEeecCC-CCCCcCCCCCCCccCCeEEEEecCC--------CeEEEEEecCCCCeEEEEEec
Q psy941 195 LAFPPNVTPI-----QYVHVLDLEQ-KGYIKAHVDSVRFCGNTIAGLSLLS--------DSVMKLVDEKTKTQEILVLLK 260 (487)
Q Consensus 195 ~~~~~~~~~~-----d~~lVN~Y~p-g~gI~~H~D~~~~~g~~IaslSLGs--------~~vm~F~~~~~~~~~~~v~L~ 260 (487)
. +......+ ..+.+..|.+ |+...+|.|....-+..+..|=-.. .-.++|.... .....+|.-.
T Consensus 103 ~-ln~~lGl~~i~~~~e~~~~~Y~~~G~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~-~~~~~~v~P~ 180 (247)
T 2hbt_A 103 H-CNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEG-KAQFADIEPK 180 (247)
T ss_dssp H-TTTTSTTCCEEEECCEEEEEECSSSCCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTT-CSSCEEECCB
T ss_pred H-HhhhcCcccccccceEEEEEecCCCCcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCC-CCceEEEEcC
Confidence 2 11100011 2377899996 9999999999421111222221111 1123333321 1234677777
Q ss_pred CCcEEeecccccccccccccccccCCCCCcccc-cC
Q psy941 261 QRSLYVMKDDARYKFTHEVLENEKSYFGDLRFK-TF 295 (487)
Q Consensus 261 ~gSLlVm~G~aRy~w~H~Ip~~~~d~~~g~RIs-Tf 295 (487)
.|.|++|..+.+ .| |+|.+. .+.|.+ |.
T Consensus 181 ~grlv~F~s~~~-~~-H~V~p~-----~~~R~sit~ 209 (247)
T 2hbt_A 181 FDRLLFFWSDRR-NP-HEVQPA-----YATRYAITV 209 (247)
T ss_dssp TTEEEEEECSTT-CC-EEECCB-----SSCEEEEEE
T ss_pred CCEEEEEecCCC-ce-eeeccC-----CCEEEEEEE
Confidence 899999975432 34 999873 578988 74
No 16
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=91.77 E-value=2.3 Score=40.89 Aligned_cols=150 Identities=17% Similarity=0.123 Sum_probs=75.5
Q ss_pred ccceeecCCCCCHHHHHHHHHHHHHHhhccc-ccccC-CC---cCCCCcccccc-------Cchhh--hHHHHHHHHHhh
Q psy941 326 LSNMLVINDFLSAEEEQSLLKEINQFIKRQR-YEYDH-WD---DAIHGFRETER-------SKWNE--ENTKIIARVQNL 391 (487)
Q Consensus 326 ~~Gl~~~pdfis~~Ee~~Ll~~l~~~l~rrr-y~~~~-w~---~~~~~y~~~~~-------~pwp~--~l~~ll~rl~~~ 391 (487)
..|..+++|||+++|.++|++++... ...+ +.... +. .....++.... ..-+. .+...++.+...
T Consensus 25 ~~g~~Vid~fLs~ee~~~L~~~~~~~-~~~g~~~~a~i~~~~~~~~~~iR~d~i~wl~~~~~~~~~~~~l~~~i~~l~~~ 103 (247)
T 2hbt_A 25 KHGICVVDDFLGKETGQQIGDEVRAL-HDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRH 103 (247)
T ss_dssp HTSEEEESSSSCHHHHHHHHHHHHHH-HHTTCSCSCCEEECCSSSTTCEECCEEEEECSCSTTCHHHHHHHHHHHHHHHH
T ss_pred cCCEEEECCCCCHHHHHHHHHHHHhh-hhcCCccccccccccccccccccccceeeecccccchhHHHHHHHHHHHHHHH
Confidence 46899999999999999999999873 1111 11000 00 00111111100 00011 122333333322
Q ss_pred cCCCCCCCC-----CeEEEeccCC-CCCcccCCCCCcccCCc----eEEEecC-----CceEEEEEecCCCCeEEEEEeC
Q psy941 392 AFPPNVTPI-----QYVHVLDLEQ-KGYIKAHVDSVRFCGNT----IAGLSLL-----SDSVMKLVDEKTKTQEILVLLK 456 (487)
Q Consensus 392 ~~~~~~~~~-----n~~liN~Y~p-G~gI~~H~D~~~~~g~~----IaslSLG-----s~~vm~F~~~~~~~~~~~v~L~ 456 (487)
.-.. ...+ -.+.+..|.+ |+...+|+|... -+.. |.-|+=. ..-.++|.... .....+|.-.
T Consensus 104 ln~~-lGl~~i~~~~e~~~~~Y~~~G~~y~~H~D~~~-~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~-~~~~~~v~P~ 180 (247)
T 2hbt_A 104 CNGK-LGSYKINGRTKAMVACYPGNGTGYVRHVDNPN-GDGRCVTCIYYLNKDWDAKVSGGILRIFPEG-KAQFADIEPK 180 (247)
T ss_dssp TTTT-STTCCEEEECCEEEEEECSSSCCEEEECSSCS-CCSEEEEEEEECBTTCCHHHHBCCEEECCTT-CSSCEEECCB
T ss_pred Hhhh-cCcccccccceEEEEEecCCCCcccccccCCC-CCCceEEEEEEeCCCCCCCCCceeEEEecCC-CCceEEEEcC
Confidence 1110 0011 2477899996 999999999932 1222 2222210 01123333321 1234567777
Q ss_pred CCcEEEeccccccccccccccCCcc
Q psy941 457 QRSLYVMKDDARYKFTHEVLENESL 481 (487)
Q Consensus 457 ~rSLlvmsG~aRy~w~HgI~~~~~~ 481 (487)
.|.|+++..+.+ ..|++.+....
T Consensus 181 ~grlv~F~s~~~--~~H~V~p~~~~ 203 (247)
T 2hbt_A 181 FDRLLFFWSDRR--NPHEVQPAYAT 203 (247)
T ss_dssp TTEEEEEECSTT--CCEEECCBSSC
T ss_pred CCEEEEEecCCC--ceeeeccCCCE
Confidence 899999986532 34888875543
No 17
>3lfm_A Protein FTO; FAT MASS and obesity associated (FTO) protein, Fe2+/2-oxoGlu (2-OG)-dependent oxidative DNA/RNA demethylases, oxidoreduc; HET: 3DT OGA; 2.50A {Homo sapiens}
Probab=89.58 E-value=0.92 Score=47.19 Aligned_cols=137 Identities=15% Similarity=0.185 Sum_probs=80.2
Q ss_pred CCCeEEEeecCCCC---------------CCcCCCCCCCccCCeEEEEe--cCCCe---------------EEE--EEec
Q psy941 203 PIQYVHVLDLEQKG---------------YIKAHVDSVRFCGNTIAGLS--LLSDS---------------VMK--LVDE 248 (487)
Q Consensus 203 ~~d~~lVN~Y~pg~---------------gI~~H~D~~~~~g~~IaslS--LGs~~---------------vm~--F~~~ 248 (487)
.+|-.|||++.|.+ .++||.|.--.-..+||.-| -.++. +-. |+-.
T Consensus 188 ~fNvTLlN~Mdp~~m~~LKeEpyfgMGKmaVsWHhDenL~~~StVAVY~~sc~~~~~~~~~~~~~~~~d~~~W~Vglkia 267 (495)
T 3lfm_A 188 AYNVTLLNFMDPQKMPYLKEEPYFGMGKMAVSWHHDENLVDRSAVAVYSYSCEGPEEESEDDSHLEGRDPDIWHVGFKIS 267 (495)
T ss_dssp CCCEEEEEEECSSCSSSCCBCSSSCCCBEEEEEECCCSBCTTCCEEEEEEECCC-------------CCTTSEEEEEEET
T ss_pred eeehhhhhccCcccccccccccccCCcceeeeeccccccccCcceEEEEeecCCccccccccccCCCCCccceeEeeeec
Confidence 58999999999842 45677776322223444433 32211 111 1110
Q ss_pred -CCCCeEEEEEecCCcEEeecccccccccccccccccCCCCCcccc-cCcccccCCCCCCCCccccc-cccccccc---c
Q psy941 249 -KTKTQEILVLLKQRSLYVMKDDARYKFTHEVLENEKSYFGDLRFK-TFPLIHSHQSSTSSNQSHIF-NEHCDGAV---K 322 (487)
Q Consensus 249 -~~~~~~~~v~L~~gSLlVm~G~aRy~w~H~Ip~~~~d~~~g~RIs-TfR~~~~~~~~~~~~~~c~~-~~~Cd~~~---~ 322 (487)
....+...|+|++||+|.|-++-....+|+|..- ...|+| |.|..... .-+-.| ..-|..+. .
T Consensus 268 wDi~tP~L~vpL~sgd~Y~Mldd~N~~HqH~VlaG-----~~~RfSSTHRVA~~s------~gT~~YI~~rC~~AL~n~~ 336 (495)
T 3lfm_A 268 WDIETPGLAIPLHQGDCYFMLDDLNATHQHCVLAG-----SQPRFSSTHRVAECS------TGTLDYILQRCQLALQNVC 336 (495)
T ss_dssp TCCSSCEEEEEECTTCEEEECTTHHHHEEEEEECC-----SSCEEEEEEECBCCT------TCBHHHHHHHHHHHGGGBC
T ss_pred ccCCCCceeeecCCCCeeeecchhhhhhhhhhhcC-----CCccccccceeeeec------CChHHHHHHHHHHHHHhcc
Confidence 1124678999999999999999999999999984 349999 99987542 112222 33444321 1
Q ss_pred cccccceeecCCCCC--HHHHHHHHHHHHH
Q psy941 323 SSILSNMLVINDFLS--AEEEQSLLKEINQ 350 (487)
Q Consensus 323 ~~~~~Gl~~~pdfis--~~Ee~~Ll~~l~~ 350 (487)
....+|-.-+..+-. ....+.+.++|.-
T Consensus 337 ~~~~~g~~sl~sl~~~~v~~~eeihnEVEF 366 (495)
T 3lfm_A 337 DDVDNDDVSLKSFEPAVLKQGEEIHNEVEF 366 (495)
T ss_dssp CSCCSSCCCBSCCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCcchhhhhhhHHHHHHHHHHHHHHHH
Confidence 122334334444433 4555667777754
No 18
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=86.26 E-value=4.5 Score=39.40 Aligned_cols=43 Identities=9% Similarity=0.146 Sum_probs=31.6
Q ss_pred eEEEEEecCCcEEeecccccccccccccccccCCCCCcccc-cCccccc
Q psy941 253 QEILVLLKQRSLYVMKDDARYKFTHEVLENEKSYFGDLRFK-TFPLIHS 300 (487)
Q Consensus 253 ~~~~v~L~~gSLlVm~G~aRy~w~H~Ip~~~~d~~~g~RIs-TfR~~~~ 300 (487)
..+.+.+++||++++.+. .| |+-.+... .....|.. ++|-+..
T Consensus 218 ~~v~~~~~aGd~v~f~~~---l~-H~s~~N~~-ss~~~R~a~~~~y~~~ 261 (313)
T 2fct_A 218 SAVPMQMKAGQFIIFWST---LM-HASYPHSG-ESQEMRMGFASRYVPS 261 (313)
T ss_dssp GCEEECBCTTEEEEEETT---SE-EEECCBCS-SSSSCEEEEEEEEEET
T ss_pred ceeEeeeCCceEEEEeCC---ce-eeCCCCCC-CCCCceEEEEEEEECC
Confidence 357899999999999995 45 88777640 12457888 8887755
No 19
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=81.17 E-value=3.6 Score=40.11 Aligned_cols=41 Identities=7% Similarity=0.120 Sum_probs=32.1
Q ss_pred eEEEEEecCCcEEeecccccccccccccccccCCCCCcccc-cCccccc
Q psy941 253 QEILVLLKQRSLYVMKDDARYKFTHEVLENEKSYFGDLRFK-TFPLIHS 300 (487)
Q Consensus 253 ~~~~v~L~~gSLlVm~G~aRy~w~H~Ip~~~~d~~~g~RIs-TfR~~~~ 300 (487)
..+.+.+++||++++.+. .| |+-.+... ...|.. +++-...
T Consensus 214 ~~v~~~~~aGd~vlf~~~---~~-H~s~~N~s---~~~R~~~~~~y~~~ 255 (308)
T 2a1x_A 214 ARVHLVMEKGDTVFFHPL---LI-HGSGQNKT---QGFRKAISCHFASA 255 (308)
T ss_dssp CCEEECBCTTCEEEECTT---CC-EEECCBCS---SSCEEEEEEEEEET
T ss_pred CeEEccCCCccEEEECCC---cc-ccCCCCCC---CCceEEEEEEEECC
Confidence 468899999999999994 56 88877653 467888 8887755
No 20
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=80.44 E-value=2.6 Score=39.58 Aligned_cols=85 Identities=18% Similarity=0.186 Sum_probs=57.9
Q ss_pred CCeEEEeecCCCCCCcCCCCCCCccCCeEEEEecC-CCeEEEEEecCC----------------CCeEEEEEecCCcEEe
Q psy941 204 IQYVHVLDLEQKGYIKAHVDSVRFCGNTIAGLSLL-SDSVMKLVDEKT----------------KTQEILVLLKQRSLYV 266 (487)
Q Consensus 204 ~d~~lVN~Y~pg~gI~~H~D~~~~~g~~IaslSLG-s~~vm~F~~~~~----------------~~~~~~v~L~~gSLlV 266 (487)
+..+-+|.|.+|+.-.+|.|....+ ..|.=|+.. ....+.|..... ......|.-..|.|+|
T Consensus 102 i~~~W~~~~~~G~~~~~H~H~~~~l-SgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvl 180 (216)
T 2rg4_A 102 LEDIWINILPEGGVHGSHIHPHSVI-SGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLL 180 (216)
T ss_dssp EEEEEEEEECTTCCEEEECCTTCSE-EEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEE
T ss_pred EeeEEEEEcCCCCcccCccCCCCeE-EEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCeEEE
Confidence 3468899999999999999964322 245555553 234677765421 0234577888999999
Q ss_pred ecccccccccccccccccCCCCCcccc-cCc
Q psy941 267 MKDDARYKFTHEVLENEKSYFGDLRFK-TFP 296 (487)
Q Consensus 267 m~G~aRy~w~H~Ip~~~~d~~~g~RIs-TfR 296 (487)
+- +. ..|+|.+... .+.||| +|=
T Consensus 181 Fp--S~--l~H~V~p~~~---~~~RiSIsFN 204 (216)
T 2rg4_A 181 WE--SW--LRHEVPMNMA---EEDRISVSFN 204 (216)
T ss_dssp EE--TT--SCEEECCCCS---SSCEEEEEEE
T ss_pred EC--CC--CEEeccCCCC---CCCEEEEEEE
Confidence 94 43 4599999753 579999 883
No 21
>3lfm_A Protein FTO; FAT MASS and obesity associated (FTO) protein, Fe2+/2-oxoGlu (2-OG)-dependent oxidative DNA/RNA demethylases, oxidoreduc; HET: 3DT OGA; 2.50A {Homo sapiens}
Probab=79.99 E-value=3.9 Score=42.59 Aligned_cols=85 Identities=16% Similarity=0.126 Sum_probs=56.4
Q ss_pred CCCeEEEeccCCCC---------------CcccCCCCCcccCCceEEEe--cCCc---------------eE--EEEEec
Q psy941 399 PIQYVHVLDLEQKG---------------YIKAHVDSVRFCGNTIAGLS--LLSD---------------SV--MKLVDE 444 (487)
Q Consensus 399 ~~n~~liN~Y~pG~---------------gI~~H~D~~~~~g~~IaslS--LGs~---------------~v--m~F~~~ 444 (487)
.||-.|||++.|-+ .++||.|.--.=..+||.-| -.++ .+ .-|+-.
T Consensus 188 ~fNvTLlN~Mdp~~m~~LKeEpyfgMGKmaVsWHhDenL~~~StVAVY~~sc~~~~~~~~~~~~~~~~d~~~W~Vglkia 267 (495)
T 3lfm_A 188 AYNVTLLNFMDPQKMPYLKEEPYFGMGKMAVSWHHDENLVDRSAVAVYSYSCEGPEEESEDDSHLEGRDPDIWHVGFKIS 267 (495)
T ss_dssp CCCEEEEEEECSSCSSSCCBCSSSCCCBEEEEEECCCSBCTTCCEEEEEEECCC-------------CCTTSEEEEEEET
T ss_pred eeehhhhhccCcccccccccccccCCcceeeeeccccccccCcceEEEEeecCCccccccccccCCCCCccceeEeeeec
Confidence 58999999998732 36799997332223666666 3221 11 112210
Q ss_pred -CCCCeEEEEEeCCCcEEEeccccccccccccccCCcccc
Q psy941 445 -KTKTQEILVLLKQRSLYVMKDDARYKFTHEVLENESLDC 483 (487)
Q Consensus 445 -~~~~~~~~v~L~~rSLlvmsG~aRy~w~HgI~~~~~~~~ 483 (487)
....+.+.|.|+.|++|.|-++--.+.+|+|..-...+|
T Consensus 268 wDi~tP~L~vpL~sgd~Y~Mldd~N~~HqH~VlaG~~~Rf 307 (495)
T 3lfm_A 268 WDIETPGLAIPLHQGDCYFMLDDLNATHQHCVLAGSQPRF 307 (495)
T ss_dssp TCCSSCEEEEEECTTCEEEECTTHHHHEEEEEECCSSCEE
T ss_pred ccCCCCceeeecCCCCeeeecchhhhhhhhhhhcCCCccc
Confidence 112357899999999999999999999999987666554
No 22
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=76.00 E-value=16 Score=35.34 Aligned_cols=27 Identities=19% Similarity=0.073 Sum_probs=24.2
Q ss_pred ccceeecCCCCCHHHHHHHHHHHHHHh
Q psy941 326 LSNMLVINDFLSAEEEQSLLKEINQFI 352 (487)
Q Consensus 326 ~~Gl~~~pdfis~~Ee~~Ll~~l~~~l 352 (487)
-.|..+++++|+++|.++|.+++...+
T Consensus 20 ~dGyvvl~~~l~~e~v~~l~~~~~~~l 46 (313)
T 2fct_A 20 KNGFIGPFDAYSPEEMKETWKRTRLRL 46 (313)
T ss_dssp HHSEEEEEESSCHHHHHHHHHHHHHHH
T ss_pred hCCEEECCCCCCHHHHHHHHHHHHHHH
Confidence 469999999999999999999998765
No 23
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=63.84 E-value=35 Score=36.98 Aligned_cols=81 Identities=14% Similarity=0.165 Sum_probs=47.7
Q ss_pred eEEEeecCCCCCCcCCCCCCCccCC-eEEEEe-cCC---------CeEEEEEecCC-----CCeEEEEEecCCcEEeecc
Q psy941 206 YVHVLDLEQKGYIKAHVDSVRFCGN-TIAGLS-LLS---------DSVMKLVDEKT-----KTQEILVLLKQRSLYVMKD 269 (487)
Q Consensus 206 ~~lVN~Y~pg~gI~~H~D~~~~~g~-~IaslS-LGs---------~~vm~F~~~~~-----~~~~~~v~L~~gSLlVm~G 269 (487)
-+.++.|.+|+...+|.|.. +. .|+.|= |-. .-.+++..... ......|.=..|+|++|.-
T Consensus 125 D~~~a~Y~~G~fL~~H~D~~---~~RrvS~VLYLN~pd~~W~~e~GGeL~Lyd~d~~~~P~~d~~~~I~P~fNrLV~F~v 201 (633)
T 3kt7_A 125 DMSINTYTKGCHLLTHDDVI---GSRRISFILYLPDPDRKWKSHYGGGLRLFPSILPNVPHSDPSAKLVPQFNQIAFFKV 201 (633)
T ss_dssp CEEEEEECTTCEEEEECCCC---TTEEEEEEEECSCTTSCCCGGGBCCEEECCEEETTEECSSCSEEECCCTTEEEEEEC
T ss_pred eEEEEEeCCCCeeeecCCCC---CCeEEEEEEEcCCCCCCCCccCCceEEEecCCCcCCCCCCceEEEecCCCeEEEEEc
Confidence 47889999999999999963 33 222222 111 11233333221 1123455555688888877
Q ss_pred cccccccccccccccCCCCCcccc
Q psy941 270 DARYKFTHEVLENEKSYFGDLRFK 293 (487)
Q Consensus 270 ~aRy~w~H~Ip~~~~d~~~g~RIs 293 (487)
.-...| |+|.++.. ...|.|
T Consensus 202 sp~~S~-H~V~eV~~---~~~RlS 221 (633)
T 3kt7_A 202 LPGFSF-HDXEEVKV---DKHRLS 221 (633)
T ss_dssp CTTTCC-EEECCBCS---SCCEEE
T ss_pred CCCCCc-CCCCccCC---CCCEEE
Confidence 534567 99887653 556666
No 24
>3nnf_A CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependent enzymes, catal cryptic chlorination, biosynthetic protein; HET: AKG; 2.20A {Lyngbya majuscula} PDB: 3nnj_A 3nnl_A* 3nnm_A
Probab=52.67 E-value=8.7 Score=38.21 Aligned_cols=26 Identities=12% Similarity=0.146 Sum_probs=23.5
Q ss_pred ccceeecCCCCCHHHHHHHHHHHHHH
Q psy941 326 LSNMLVINDFLSAEEEQSLLKEINQF 351 (487)
Q Consensus 326 ~~Gl~~~pdfis~~Ee~~Ll~~l~~~ 351 (487)
-+|..++++++|++|-+.|.++++..
T Consensus 39 ~eGYLvlk~vFs~eEv~~l~~el~~~ 64 (344)
T 3nnf_A 39 EKGYCQIKKIFDFSAIKTIQKTLDQA 64 (344)
T ss_dssp HHSEEEETTCSCHHHHHHHHHHHHHH
T ss_pred cCceEEEcCCCCHHHHHHHHHHHHHH
Confidence 46999999999999999999999874
No 25
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=43.68 E-value=28 Score=34.10 Aligned_cols=77 Identities=21% Similarity=0.172 Sum_probs=53.4
Q ss_pred CeEEEeccCC------CCCcccCCCCCcccCCceEEEecCC-ceEEEEEecCCCCeEEEEEeCCCcEEEecccccccccc
Q psy941 401 QYVHVLDLEQ------KGYIKAHVDSVRFCGNTIAGLSLLS-DSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTH 473 (487)
Q Consensus 401 n~~liN~Y~p------G~gI~~H~D~~~~~g~~IaslSLGs-~~vm~F~~~~~~~~~~~v~L~~rSLlvmsG~aRy~w~H 473 (487)
..+.+|+|.| +-++++|.|.- .|..| +.. ..=+....+. ++.+.|.-.+|+++|.-|++=..|+-
T Consensus 169 ~~lr~~~Ypp~~~~~~~~g~~~HtD~g-----~lTlL-~qd~v~GLqV~~~~--g~W~~V~p~pg~~vVNiGD~l~~~Tn 240 (312)
T 3oox_A 169 SVLRLLHYPPIPKDATGVRAGAHGDIN-----TITLL-LGAEEGGLEVLDRD--GQWLPINPPPGCLVINIGDMLERLTN 240 (312)
T ss_dssp CEEEEEEECCCSSCCC--CEEEECCCS-----SEEEE-ECCTTSCEEEECTT--SCEEECCCCSSCEEEEECHHHHHHTT
T ss_pred ceeeeEecCCCCCCcCCcCccceecCc-----eEEEE-eEcCcCceEEECCC--CcEEECCCCCCeEEEEhHHHHHHHhC
Confidence 3677899986 23788999962 33333 222 1224443332 46889999999999999999999998
Q ss_pred ccccCCcccccc
Q psy941 474 EVLENESLDCLN 485 (487)
Q Consensus 474 gI~~~~~~~~~~ 485 (487)
|.-+....+++|
T Consensus 241 G~~kS~~HRVv~ 252 (312)
T 3oox_A 241 NVLPSTVHRVVN 252 (312)
T ss_dssp TSSCCCCEEECC
T ss_pred CeecCCCceEeC
Confidence 888877777665
No 26
>3gja_A CYTC3; halogenase, beta barrel, biosynthetic protein; 2.20A {Streptomyces} PDB: 3gjb_A*
Probab=39.08 E-value=26 Score=34.42 Aligned_cols=28 Identities=11% Similarity=0.018 Sum_probs=24.7
Q ss_pred ccceeecCCCCCHHHHHHHHHHHHHHhh
Q psy941 326 LSNMLVINDFLSAEEEQSLLKEINQFIK 353 (487)
Q Consensus 326 ~~Gl~~~pdfis~~Ee~~Ll~~l~~~l~ 353 (487)
-.|..+++++|+++|.++|.++++..+.
T Consensus 22 ~~Gyv~i~~~l~~~~v~~l~~~i~~~l~ 49 (319)
T 3gja_A 22 RDGYIGPVKIFEPEEMTRRWNIIRRQLL 49 (319)
T ss_dssp HHSEEEEEESSCHHHHHHHHHHHHHHHH
T ss_pred HCCEEECcCCCCHHHHHHHHHHHHHHhh
Confidence 4599999999999999999999988654
No 27
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=37.47 E-value=38 Score=32.70 Aligned_cols=77 Identities=13% Similarity=0.084 Sum_probs=52.9
Q ss_pred CeEEEeccCCC-------C-CcccCCCCCcccCCceEEEecCC-ceEEEEEecCCCCeEEEEEeCCCcEEEecccccccc
Q psy941 401 QYVHVLDLEQK-------G-YIKAHVDSVRFCGNTIAGLSLLS-DSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKF 471 (487)
Q Consensus 401 n~~liN~Y~pG-------~-gI~~H~D~~~~~g~~IaslSLGs-~~vm~F~~~~~~~~~~~v~L~~rSLlvmsG~aRy~w 471 (487)
..+.+|+|.+- . ++++|.|-- .|..| +.. ..=+....+ .+..+.|.-.+|+++|.-|++=..|
T Consensus 150 ~~lr~~~YP~~~~~~~~~~~g~~~HtD~g-----~lTlL-~qd~~~GLqV~~~--~g~W~~V~p~pg~~vVNiGD~l~~~ 221 (280)
T 3on7_A 150 TLLRILHYPPMTGDEEMGAIRAAAHEDIN-----LITVL-PTANEPGLQVKAK--DGSWLDVPSDFGNIIINIGDMLQEA 221 (280)
T ss_dssp CEEEEEEECCCCTTCCCCSEEEEEECCCS-----SEEEE-ECCSCCCEEEECT--TSCEEECCCCTTCEEEEECHHHHHH
T ss_pred ceEEEEECCCCCCccccCcccccCCCCCC-----eEEEE-EecCCCCeEEEcC--CCCEEECcCCCCEEEEEcChHHHHH
Confidence 35678999851 2 688999962 22222 221 122444333 2468899999999999999999999
Q ss_pred ccccccCCcccccc
Q psy941 472 THEVLENESLDCLN 485 (487)
Q Consensus 472 ~HgI~~~~~~~~~~ 485 (487)
+-|.-+....+++|
T Consensus 222 Tng~~kS~~HRVv~ 235 (280)
T 3on7_A 222 SDGYFPSTSHRVIN 235 (280)
T ss_dssp TTTSSCCCCEEEEC
T ss_pred hCCcccCCCceEeC
Confidence 98888777777665
No 28
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=34.89 E-value=63 Score=31.77 Aligned_cols=74 Identities=20% Similarity=0.082 Sum_probs=51.6
Q ss_pred eEEEeccCC------CCCcccCCCCCcccCCceEEEecCC--ceEEEEEecCCCCeEEEEEeCCCcEEEecccccccccc
Q psy941 402 YVHVLDLEQ------KGYIKAHVDSVRFCGNTIAGLSLLS--DSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTH 473 (487)
Q Consensus 402 ~~liN~Y~p------G~gI~~H~D~~~~~g~~IaslSLGs--~~vm~F~~~~~~~~~~~v~L~~rSLlvmsG~aRy~w~H 473 (487)
.+.+|+|.+ ..|+++|.|.- .|..| +.. ..=+...+ .+..+.|.-.+|+++|.-|++=..|+.
T Consensus 156 ~lrl~~YPp~~~~~~~~g~~~HtD~g-----~lTlL-~qd~~v~GLQV~~---~g~Wi~V~p~pgalvVNiGD~l~~~Sn 226 (319)
T 1w9y_A 156 GTKVSNYPPCPKPDLIKGLRAHTDAG-----GIILL-FQDDKVSGLQLLK---DGQWIDVPPMRHSIVVNLGDQLEVITN 226 (319)
T ss_dssp EEEEEECCCCSCGGGGSSCCCBCCSS-----SEEEE-EESSSCCCEEEEE---TTEEEECCCCTTCEEEEECHHHHHHTT
T ss_pred eeEEEecCCCcccccccccccccCCC-----ceEEE-EecCCCCeeeEee---CCeEEEcccCCCcEEEEhHHHHHHHhC
Confidence 567999986 23899999952 22222 221 12233332 257889999999999999999999999
Q ss_pred ccccCCccccc
Q psy941 474 EVLENESLDCL 484 (487)
Q Consensus 474 gI~~~~~~~~~ 484 (487)
|.-+....+++
T Consensus 227 G~~kS~~HRVv 237 (319)
T 1w9y_A 227 GKYKSVMHRVI 237 (319)
T ss_dssp TSSCCCCEEEC
T ss_pred Ceeecccceec
Confidence 88777766665
No 29
>3gja_A CYTC3; halogenase, beta barrel, biosynthetic protein; 2.20A {Streptomyces} PDB: 3gjb_A*
Probab=33.95 E-value=38 Score=33.26 Aligned_cols=27 Identities=11% Similarity=0.046 Sum_probs=24.2
Q ss_pred CCeEEEcCCCCHHHHHHHHHHHHHHhh
Q psy941 131 SNMLVINDFLSAEEEQSLLKEINQFIK 157 (487)
Q Consensus 131 ~Gl~~ipdfls~~Ee~~Ll~~i~~~l~ 157 (487)
.|..+++++|+++|-++|.++++..+.
T Consensus 23 ~Gyv~i~~~l~~~~v~~l~~~i~~~l~ 49 (319)
T 3gja_A 23 DGYIGPVKIFEPEEMTRRWNIIRRQLL 49 (319)
T ss_dssp HSEEEEEESSCHHHHHHHHHHHHHHHH
T ss_pred CCEEECcCCCCHHHHHHHHHHHHHHhh
Confidence 799999999999999999999987653
No 30
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=33.58 E-value=2.5e+02 Score=30.38 Aligned_cols=72 Identities=14% Similarity=0.154 Sum_probs=39.7
Q ss_pred eEEEeccCCCCCcccCCCCCcccCCc-eEEE-ecCC---------ceEEEEEecCC-----CCeEEEEEeCCCcEEEecc
Q psy941 402 YVHVLDLEQKGYIKAHVDSVRFCGNT-IAGL-SLLS---------DSVMKLVDEKT-----KTQEILVLLKQRSLYVMKD 465 (487)
Q Consensus 402 ~~liN~Y~pG~gI~~H~D~~~~~g~~-Iasl-SLGs---------~~vm~F~~~~~-----~~~~~~v~L~~rSLlvmsG 465 (487)
.+.++.|.+|+.+..|.|. ++.. |+.| -|.. .-.+++..... ......|.=..|+|++|.-
T Consensus 125 D~~~a~Y~~G~fL~~H~D~---~~~RrvS~VLYLN~pd~~W~~e~GGeL~Lyd~d~~~~P~~d~~~~I~P~fNrLV~F~v 201 (633)
T 3kt7_A 125 DMSINTYTKGCHLLTHDDV---IGSRRISFILYLPDPDRKWKSHYGGGLRLFPSILPNVPHSDPSAKLVPQFNQIAFFKV 201 (633)
T ss_dssp CEEEEEECTTCEEEEECCC---CTTEEEEEEEECSCTTSCCCGGGBCCEEECCEEETTEECSSCSEEECCCTTEEEEEEC
T ss_pred eEEEEEeCCCCeeeecCCC---CCCeEEEEEEEcCCCCCCCCccCCceEEEecCCCcCCCCCCceEEEecCCCeEEEEEc
Confidence 5888999999999999996 3332 2221 1111 11122222211 1123455556678888876
Q ss_pred cccccccccccc
Q psy941 466 DARYKFTHEVLE 477 (487)
Q Consensus 466 ~aRy~w~HgI~~ 477 (487)
.-...| |++.+
T Consensus 202 sp~~S~-H~V~e 212 (633)
T 3kt7_A 202 LPGFSF-HDXEE 212 (633)
T ss_dssp CTTTCC-EEECC
T ss_pred CCCCCc-CCCCc
Confidence 533445 76644
No 31
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=32.04 E-value=48 Score=32.36 Aligned_cols=69 Identities=22% Similarity=0.176 Sum_probs=45.7
Q ss_pred CeEEEeecCC------CCCCcCCCCCCCccCCeEEEEecCC-CeEEEEEecCCCCeEEEEEecCCcEEeecccccccccc
Q psy941 205 QYVHVLDLEQ------KGYIKAHVDSVRFCGNTIAGLSLLS-DSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTH 277 (487)
Q Consensus 205 d~~lVN~Y~p------g~gI~~H~D~~~~~g~~IaslSLGs-~~vm~F~~~~~~~~~~~v~L~~gSLlVm~G~aRy~w~H 277 (487)
..+-+|+|.+ +-|+++|.|.- .|..| +.+ ..=+....+ .+.++.|.-.+|+++|.-|++=..|+-
T Consensus 169 ~~lr~~~Ypp~~~~~~~~g~~~HtD~g-----~lTlL-~qd~v~GLqV~~~--~g~W~~V~p~pg~~vVNiGD~l~~~Tn 240 (312)
T 3oox_A 169 SVLRLLHYPPIPKDATGVRAGAHGDIN-----TITLL-LGAEEGGLEVLDR--DGQWLPINPPPGCLVINIGDMLERLTN 240 (312)
T ss_dssp CEEEEEEECCCSSCCC--CEEEECCCS-----SEEEE-ECCTTSCEEEECT--TSCEEECCCCSSCEEEEECHHHHHHTT
T ss_pred ceeeeEecCCCCCCcCCcCccceecCc-----eEEEE-eEcCcCceEEECC--CCcEEECCCCCCeEEEEhHHHHHHHhC
Confidence 4677899986 23788999952 23333 222 112333333 257999999999999999999888876
Q ss_pred cccc
Q psy941 278 EVLE 281 (487)
Q Consensus 278 ~Ip~ 281 (487)
|.-+
T Consensus 241 G~~k 244 (312)
T 3oox_A 241 NVLP 244 (312)
T ss_dssp TSSC
T ss_pred Ceec
Confidence 5544
No 32
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=31.79 E-value=63 Score=32.26 Aligned_cols=75 Identities=9% Similarity=-0.035 Sum_probs=50.9
Q ss_pred eEEEeccCC------CCCcccCCCCCcccCCceEEEecCCceEEEEEecCCCCeEEEEEeCCCcEEEecccccccccccc
Q psy941 402 YVHVLDLEQ------KGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTHEV 475 (487)
Q Consensus 402 ~~liN~Y~p------G~gI~~H~D~~~~~g~~IaslSLGs~~vm~F~~~~~~~~~~~v~L~~rSLlvmsG~aRy~w~HgI 475 (487)
.+.+|+|.+ .-|+++|.|.- .|..|-=-...=+...+ .+..+.|.-.+|+++|.-|++=..|+.|.
T Consensus 211 ~lrl~~YPp~~~~~~~~g~~~HtD~g-----~lTlL~qd~v~GLQV~~---~g~Wi~V~p~pgalvVNiGD~l~~~TnG~ 282 (356)
T 1gp6_A 211 QMKINYYPKCPQPELALGVEAHTDVS-----ALTFILHNMVPGLQLFY---EGKWVTAKCVPDSIVMHIGDTLEILSNGK 282 (356)
T ss_dssp EEEEEEECCCSSTTTCCSEEEECCCS-----SEEEEEECSCCCEEEEE---TTEEEECCCCTTCEEEEECHHHHHHTTTS
T ss_pred eeeeeecCCCCCcccccCcCCccCCC-----eEEEEEEcCCCCeEEec---CCcEEECcCCCCeEEEEeccHHHHhcCCE
Confidence 566899985 13899999962 22221110011233332 25788999999999999999999999988
Q ss_pred ccCCccccc
Q psy941 476 LENESLDCL 484 (487)
Q Consensus 476 ~~~~~~~~~ 484 (487)
-+....+++
T Consensus 283 ~kS~~HRVv 291 (356)
T 1gp6_A 283 YKSILHRGL 291 (356)
T ss_dssp SCCCCEEEC
T ss_pred eeccCceec
Confidence 777776665
No 33
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=30.93 E-value=43 Score=32.79 Aligned_cols=76 Identities=7% Similarity=-0.058 Sum_probs=51.0
Q ss_pred eEEEeccCC-------C--C-CcccCCCCCcccCCceEEE----ecCCceEEEEEecCCCCeEEEEEeCCCcEEEecccc
Q psy941 402 YVHVLDLEQ-------K--G-YIKAHVDSVRFCGNTIAGL----SLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDA 467 (487)
Q Consensus 402 ~~liN~Y~p-------G--~-gI~~H~D~~~~~g~~Iasl----SLGs~~vm~F~~~~~~~~~~~v~L~~rSLlvmsG~a 467 (487)
.+.+|+|.+ | + ++++|.|.- .|..| .-|+..-+.... .+..+.|.-.+|+++|.-|++
T Consensus 158 ~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g-----~lTlL~qd~~v~G~~~LqV~~---~g~W~~V~p~pg~lvVNiGD~ 229 (311)
T 1dcs_A 158 LLRFRYFPQVPEHRSAEEQPLRMAPHYDLS-----MVTLIQQTPCANGFVSLQAEV---GGAFTDLPYRPDAVLVFCGAI 229 (311)
T ss_dssp EEEEEEECC-----------CCEEEEEECS-----SEEEEEEECCTTCCCCEEEEE---TTEEEECCCCTTCEEEEECHH
T ss_pred hhheecCCCCCcccccCccccccccccCCC-----eEEEEecCCCCCCceeEEEEe---CCEEEeCcCCCCeEEEEHHHH
Confidence 567899985 2 2 499999962 22221 122211133333 257889999999999999999
Q ss_pred ccccccccccCCcccccc
Q psy941 468 RYKFTHEVLENESLDCLN 485 (487)
Q Consensus 468 Ry~w~HgI~~~~~~~~~~ 485 (487)
=..|+.|.-+....++++
T Consensus 230 l~~~TnG~~kS~~HRVv~ 247 (311)
T 1dcs_A 230 ATLVTGGQVKAPRHHVAA 247 (311)
T ss_dssp HHHHTTSCSCCCCEEECC
T ss_pred HHHHhCCcccCCCceEeC
Confidence 999999887777666653
No 34
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=29.45 E-value=79 Score=31.00 Aligned_cols=67 Identities=22% Similarity=0.099 Sum_probs=45.5
Q ss_pred eEEEeecCC------CCCCcCCCCCCCccCCeEEEEecCC--CeEEEEEecCCCCeEEEEEecCCcEEeecccccccccc
Q psy941 206 YVHVLDLEQ------KGYIKAHVDSVRFCGNTIAGLSLLS--DSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTH 277 (487)
Q Consensus 206 ~~lVN~Y~p------g~gI~~H~D~~~~~g~~IaslSLGs--~~vm~F~~~~~~~~~~~v~L~~gSLlVm~G~aRy~w~H 277 (487)
.+-+|+|.+ ..|+++|.|.- .|..| +.+ ..=+...+ .+.++.|.-.+|+++|.-|++=..|+.
T Consensus 156 ~lrl~~YPp~~~~~~~~g~~~HtD~g-----~lTlL-~qd~~v~GLQV~~---~g~Wi~V~p~pgalvVNiGD~l~~~Sn 226 (319)
T 1w9y_A 156 GTKVSNYPPCPKPDLIKGLRAHTDAG-----GIILL-FQDDKVSGLQLLK---DGQWIDVPPMRHSIVVNLGDQLEVITN 226 (319)
T ss_dssp EEEEEECCCCSCGGGGSSCCCBCCSS-----SEEEE-EESSSCCCEEEEE---TTEEEECCCCTTCEEEEECHHHHHHTT
T ss_pred eeEEEecCCCcccccccccccccCCC-----ceEEE-EecCCCCeeeEee---CCeEEEcccCCCcEEEEhHHHHHHHhC
Confidence 577899986 24899999952 22222 111 11122222 357999999999999999999888877
Q ss_pred cccc
Q psy941 278 EVLE 281 (487)
Q Consensus 278 ~Ip~ 281 (487)
|.-+
T Consensus 227 G~~k 230 (319)
T 1w9y_A 227 GKYK 230 (319)
T ss_dssp TSSC
T ss_pred Ceee
Confidence 6554
No 35
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=26.73 E-value=77 Score=31.60 Aligned_cols=68 Identities=9% Similarity=-0.018 Sum_probs=44.8
Q ss_pred eEEEeecCC------CCCCcCCCCCCCccCCeEEEEecCCCeEEEEEecCCCCeEEEEEecCCcEEeecccccccccccc
Q psy941 206 YVHVLDLEQ------KGYIKAHVDSVRFCGNTIAGLSLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTHEV 279 (487)
Q Consensus 206 ~~lVN~Y~p------g~gI~~H~D~~~~~g~~IaslSLGs~~vm~F~~~~~~~~~~~v~L~~gSLlVm~G~aRy~w~H~I 279 (487)
.+-+|+|.+ .-|+++|.|.- .|..|-=-...=+...+ .+.++.|.-.+|+++|.-|++=..|+.|.
T Consensus 211 ~lrl~~YPp~~~~~~~~g~~~HtD~g-----~lTlL~qd~v~GLQV~~---~g~Wi~V~p~pgalvVNiGD~l~~~TnG~ 282 (356)
T 1gp6_A 211 QMKINYYPKCPQPELALGVEAHTDVS-----ALTFILHNMVPGLQLFY---EGKWVTAKCVPDSIVMHIGDTLEILSNGK 282 (356)
T ss_dssp EEEEEEECCCSSTTTCCSEEEECCCS-----SEEEEEECSCCCEEEEE---TTEEEECCCCTTCEEEEECHHHHHHTTTS
T ss_pred eeeeeecCCCCCcccccCcCCccCCC-----eEEEEEEcCCCCeEEec---CCcEEECcCCCCeEEEEeccHHHHhcCCE
Confidence 566899985 23899999952 12222110011122222 35799999999999999999988887776
Q ss_pred cc
Q psy941 280 LE 281 (487)
Q Consensus 280 p~ 281 (487)
-+
T Consensus 283 ~k 284 (356)
T 1gp6_A 283 YK 284 (356)
T ss_dssp SC
T ss_pred ee
Confidence 55
No 36
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=26.69 E-value=33 Score=33.94 Aligned_cols=64 Identities=9% Similarity=-0.063 Sum_probs=43.9
Q ss_pred CcccCCCCCcccCCceEEEecCC-ceEEEEEecCCCCeEEEEEeCCCcEEEeccccccccccccccCCcccccc
Q psy941 413 YIKAHVDSVRFCGNTIAGLSLLS-DSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKFTHEVLENESLDCLN 485 (487)
Q Consensus 413 gI~~H~D~~~~~g~~IaslSLGs-~~vm~F~~~~~~~~~~~v~L~~rSLlvmsG~aRy~w~HgI~~~~~~~~~~ 485 (487)
|+++|.|.- .|..| +.. ..=+....+ .+ .+.|.-.+|+++|.-|++=..|+.|.-+....+++|
T Consensus 210 g~~~HtD~g-----~lTlL-~qd~v~GLQV~~~--~g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~ 274 (331)
T 1odm_A 210 SFEWHEDVS-----LITVL-YQSNVQNLQVETA--AG-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKW 274 (331)
T ss_dssp EEEEECCSS-----SEEEE-EECSSCCEEEEET--TE-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEEC
T ss_pred ccccccCCC-----eEEEE-eeCCCCCEEEEcC--CC-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCC
Confidence 799999962 22222 111 122333332 24 888999999999999999999999988877777654
No 37
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=24.29 E-value=51 Score=32.26 Aligned_cols=71 Identities=8% Similarity=-0.063 Sum_probs=45.3
Q ss_pred CeEEEeecCC-------C---CCCcCCCCCCCccCCeEEEE--ecCCCeEEEEEecCCCCeEEEEEecCCcEEeeccccc
Q psy941 205 QYVHVLDLEQ-------K---GYIKAHVDSVRFCGNTIAGL--SLLSDSVMKLVDEKTKTQEILVLLKQRSLYVMKDDAR 272 (487)
Q Consensus 205 d~~lVN~Y~p-------g---~gI~~H~D~~~~~g~~Iasl--SLGs~~vm~F~~~~~~~~~~~v~L~~gSLlVm~G~aR 272 (487)
..+-+|+|.+ + -++++|.|.-- + +|.-= ..|+..-+.... .+.++.|.-.+|+++|.-|++=
T Consensus 157 ~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~-l--TlL~qd~~v~G~~~LqV~~---~g~W~~V~p~pg~lvVNiGD~l 230 (311)
T 1dcs_A 157 PLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSM-V--TLIQQTPCANGFVSLQAEV---GGAFTDLPYRPDAVLVFCGAIA 230 (311)
T ss_dssp CEEEEEEECC-----------CCEEEEEECSS-E--EEEEEECCTTCCCCEEEEE---TTEEEECCCCTTCEEEEECHHH
T ss_pred hhhheecCCCCCcccccCccccccccccCCCe-E--EEEecCCCCCCceeEEEEe---CCEEEeCcCCCCeEEEEHHHHH
Confidence 4677899985 1 14899999521 1 11111 122211133333 3579999999999999999998
Q ss_pred ccccccccc
Q psy941 273 YKFTHEVLE 281 (487)
Q Consensus 273 y~w~H~Ip~ 281 (487)
..|+.|.-+
T Consensus 231 ~~~TnG~~k 239 (311)
T 1dcs_A 231 TLVTGGQVK 239 (311)
T ss_dssp HHHTTSCSC
T ss_pred HHHhCCccc
Confidence 888766554
No 38
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=22.75 E-value=1.2e+02 Score=29.18 Aligned_cols=69 Identities=12% Similarity=0.034 Sum_probs=45.2
Q ss_pred CeEEEeecCCC--------CCCcCCCCCCCccCCeEEEEecCC-CeEEEEEecCCCCeEEEEEecCCcEEeecccccccc
Q psy941 205 QYVHVLDLEQK--------GYIKAHVDSVRFCGNTIAGLSLLS-DSVMKLVDEKTKTQEILVLLKQRSLYVMKDDARYKF 275 (487)
Q Consensus 205 d~~lVN~Y~pg--------~gI~~H~D~~~~~g~~IaslSLGs-~~vm~F~~~~~~~~~~~v~L~~gSLlVm~G~aRy~w 275 (487)
..+-+|+|.+- -|+++|.|.- .|..| +.+ ..=+....+ .+.++.|.-.+|+++|.-|++=..|
T Consensus 150 ~~lr~~~YP~~~~~~~~~~~g~~~HtD~g-----~lTlL-~qd~~~GLqV~~~--~g~W~~V~p~pg~~vVNiGD~l~~~ 221 (280)
T 3on7_A 150 TLLRILHYPPMTGDEEMGAIRAAAHEDIN-----LITVL-PTANEPGLQVKAK--DGSWLDVPSDFGNIIINIGDMLQEA 221 (280)
T ss_dssp CEEEEEEECCCCTTCCCCSEEEEEECCCS-----SEEEE-ECCSCCCEEEECT--TSCEEECCCCTTCEEEEECHHHHHH
T ss_pred ceEEEEECCCCCCccccCcccccCCCCCC-----eEEEE-EecCCCCeEEEcC--CCCEEECcCCCCEEEEEcChHHHHH
Confidence 45678999851 1688999952 22222 222 112333333 3579999999999999999998888
Q ss_pred cccccc
Q psy941 276 THEVLE 281 (487)
Q Consensus 276 ~H~Ip~ 281 (487)
+-+.-+
T Consensus 222 Tng~~k 227 (280)
T 3on7_A 222 SDGYFP 227 (280)
T ss_dssp TTTSSC
T ss_pred hCCccc
Confidence 655444
No 39
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=22.31 E-value=1.3e+02 Score=27.62 Aligned_cols=74 Identities=18% Similarity=0.140 Sum_probs=49.9
Q ss_pred CeEEEeccCCCCCcccCCCCCcccCCceEEEecCC-ceEEEEEecCC------------C----CeEEEEEeCCCcEEEe
Q psy941 401 QYVHVLDLEQKGYIKAHVDSVRFCGNTIAGLSLLS-DSVMKLVDEKT------------K----TQEILVLLKQRSLYVM 463 (487)
Q Consensus 401 n~~liN~Y~pG~gI~~H~D~~~~~g~~IaslSLGs-~~vm~F~~~~~------------~----~~~~~v~L~~rSLlvm 463 (487)
..+-+|.|++|+...+|.|....+ ..|.-|+... ...+.|..... . .....+.-..|.|+|+
T Consensus 103 ~~~W~~~~~~G~~~~~H~H~~~~l-SgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlF 181 (216)
T 2rg4_A 103 EDIWINILPEGGVHGSHIHPHSVI-SGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLW 181 (216)
T ss_dssp EEEEEEEECTTCCEEEECCTTCSE-EEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEE
T ss_pred eeEEEEEcCCCCcccCccCCCCeE-EEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCeEEEE
Confidence 478899999999999999964332 2455566542 33677765420 0 2234778889999999
Q ss_pred ccccccccccccccCC
Q psy941 464 KDDARYKFTHEVLENE 479 (487)
Q Consensus 464 sG~aRy~w~HgI~~~~ 479 (487)
-.. ..|++.+..
T Consensus 182 pS~----l~H~V~p~~ 193 (216)
T 2rg4_A 182 ESW----LRHEVPMNM 193 (216)
T ss_dssp ETT----SCEEECCCC
T ss_pred CCC----CEEeccCCC
Confidence 543 459998843
No 40
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=21.42 E-value=39 Score=33.40 Aligned_cols=64 Identities=11% Similarity=0.014 Sum_probs=42.3
Q ss_pred EeecC------C----------CCCCcCCCCCCCccCCeEEEEecCC-CeEEEEEecCCCCeEEEEEecCCcEEeecccc
Q psy941 209 VLDLE------Q----------KGYIKAHVDSVRFCGNTIAGLSLLS-DSVMKLVDEKTKTQEILVLLKQRSLYVMKDDA 271 (487)
Q Consensus 209 VN~Y~------p----------g~gI~~H~D~~~~~g~~IaslSLGs-~~vm~F~~~~~~~~~~~v~L~~gSLlVm~G~a 271 (487)
+|+|. + .-|+++|.|.- .|..| +.+ ..=+..... .+ ++.|.-.+|+++|.-|++
T Consensus 186 l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g-----~lTlL-~qd~v~GLQV~~~--~g-Wi~V~p~pgalvVNiGD~ 256 (331)
T 1odm_A 186 LIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVS-----LITVL-YQSNVQNLQVETA--AG-YQDIEADDTGYLINCGSY 256 (331)
T ss_dssp EEEECCCSSCCGGGCEECTTSCEEEEEEECCSS-----SEEEE-EECSSCCEEEEET--TE-EEECCCCTTSEEEEECHH
T ss_pred HhhCCCcccccccccCCCccccccccccccCCC-----eEEEE-eeCCCCCEEEEcC--CC-eEECCCCCCeEEEEccHH
Confidence 89998 5 23789999952 12222 111 111333333 25 999999999999999999
Q ss_pred cccccccccc
Q psy941 272 RYKFTHEVLE 281 (487)
Q Consensus 272 Ry~w~H~Ip~ 281 (487)
=..|+.|.-+
T Consensus 257 l~~~TnG~~k 266 (331)
T 1odm_A 257 MAHLTNNYYK 266 (331)
T ss_dssp HHHHTTTSSC
T ss_pred HHHHhCCEee
Confidence 8888766554
Done!