Query psy9411
Match_columns 118
No_of_seqs 130 out of 1031
Neff 7.8
Searched_HMMs 29240
Date Fri Aug 16 18:31:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9411.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9411hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1r94_A Protein YFHF; tetrameri 100.0 2.1E-42 7.3E-47 230.0 12.7 109 9-118 1-109 (118)
2 1nwb_A Hypothetical protein AQ 100.0 1.1E-42 3.8E-47 233.1 6.9 112 7-118 6-117 (124)
3 1x0g_A ISCA; [2Fe-2S], biosynt 100.0 2E-42 6.9E-47 228.1 6.3 109 10-118 1-111 (112)
4 2apn_A Protein HI1723; HI1723 100.0 1.5E-41 5.1E-46 224.5 7.9 110 7-116 5-114 (114)
5 2d2a_A SUFA protein; iron-sulf 100.0 1.8E-40 6.1E-45 227.5 12.6 108 8-116 38-145 (145)
6 2k4z_A DSRR; ISCA/SUFA/HESB li 100.0 1.2E-30 4E-35 174.9 12.3 101 6-109 18-121 (125)
7 2p2e_A Putative Fe-S biosynthe 99.9 2.2E-24 7.6E-29 144.8 6.2 98 7-106 1-116 (128)
8 2qgo_A Putative Fe-S biosynthe 99.9 3.6E-23 1.2E-27 140.9 4.3 92 7-104 2-104 (141)
9 2k02_A Ferrous iron transport 50.8 24 0.00083 21.1 4.0 33 9-44 24-56 (87)
10 2a6s_A Toxin YOEB; YEFM, antit 50.7 12 0.0004 21.4 2.5 16 9-24 1-16 (84)
11 1paa_A Yeast transcription fac 50.5 6.1 0.00021 17.0 1.0 10 107-116 4-14 (30)
12 2m0e_A Zinc finger and BTB dom 50.1 9.3 0.00032 16.0 1.6 11 107-117 4-15 (29)
13 2lvu_A Zinc finger and BTB dom 53.0 4 0.00014 17.2 0.0 10 107-116 4-14 (26)
14 1znf_A 31ST zinc finger from X 47.1 6.8 0.00023 16.4 0.8 10 107-116 3-13 (27)
15 1klr_A Zinc finger Y-chromosom 46.6 9.6 0.00033 16.1 1.4 10 107-116 4-14 (30)
16 1ard_A Yeast transcription fac 45.5 7.2 0.00024 16.6 0.8 10 107-116 4-14 (29)
17 1rik_A E6APC1 peptide; E6-bind 42.9 6.7 0.00023 16.7 0.4 10 107-116 4-14 (29)
18 2kvh_A Zinc finger and BTB dom 42.3 6.1 0.00021 16.7 0.2 10 107-116 5-15 (27)
19 2m0d_A Zinc finger and BTB dom 40.5 6.8 0.00023 16.7 0.2 10 107-116 5-15 (30)
20 1wmi_A RELE, hypothetical prot 39.7 7.9 0.00027 22.0 0.5 16 9-24 3-18 (90)
21 1rim_A E6APC2 peptide; E6-bind 39.4 15 0.00053 16.5 1.5 11 106-116 3-14 (33)
22 2lvt_A Zinc finger and BTB dom 45.3 6.4 0.00022 16.9 0.0 10 107-116 4-14 (29)
23 1p7a_A BF3, BKLF, kruppel-like 38.8 12 0.0004 17.1 1.0 11 106-116 12-23 (37)
24 2khe_A Toxin RELE, toxin-like 38.4 8.5 0.00029 21.8 0.5 14 9-22 3-16 (89)
25 2kvf_A Zinc finger and BTB dom 38.3 7.9 0.00027 16.4 0.3 10 107-116 5-15 (28)
26 2lvr_A Zinc finger and BTB dom 43.8 6.9 0.00024 16.8 0.0 10 107-116 5-15 (30)
27 2m0f_A Zinc finger and BTB dom 35.9 8.6 0.0003 16.2 0.2 10 107-116 4-14 (29)
28 2elr_A Zinc finger protein 406 35.6 20 0.00068 16.1 1.6 12 105-116 9-21 (36)
29 1zfd_A SWI5; DNA binding motif 35.1 18 0.00061 15.7 1.3 11 106-116 4-17 (32)
30 2elx_A Zinc finger protein 406 34.4 9.9 0.00034 17.0 0.3 11 106-116 8-19 (35)
31 2kfq_A FP1; protein, de novo p 34.2 12 0.00042 16.7 0.6 10 106-115 3-13 (32)
32 2elm_A Zinc finger protein 406 33.6 7.2 0.00025 18.2 -0.3 10 107-116 11-21 (37)
33 2elp_A Zinc finger protein 406 32.9 12 0.0004 17.2 0.4 12 106-117 10-22 (37)
34 2kvg_A Zinc finger and BTB dom 32.7 6.4 0.00022 16.8 -0.6 10 107-116 5-15 (27)
35 1srk_A Zinc finger protein ZFP 32.4 9.5 0.00033 17.2 0.0 11 106-116 8-19 (35)
36 1z8m_A Conserved hypothetical 32.1 31 0.0011 19.6 2.3 18 9-26 2-19 (88)
37 3gx8_A Monothiol glutaredoxin- 31.9 56 0.0019 20.2 3.7 28 13-45 1-32 (121)
38 1sp2_A SP1F2; zinc finger, tra 31.7 16 0.00054 15.9 0.8 11 106-116 3-16 (31)
39 2otr_A Hypothetical protein HP 31.5 37 0.0013 19.8 2.6 19 9-27 2-20 (98)
40 3tbo_A Zinc finger, CDGSH-type 30.5 16 0.00055 20.6 0.8 10 106-115 23-32 (60)
41 2eos_A B-cell lymphoma 6 prote 30.5 18 0.0006 17.1 0.9 12 105-116 11-23 (42)
42 2ytb_A Zinc finger protein 32; 30.0 18 0.0006 17.0 0.8 11 106-116 12-23 (42)
43 2elo_A Zinc finger protein 406 29.4 8.2 0.00028 17.7 -0.6 11 106-116 10-21 (37)
44 3sao_A Extracellular fatty aci 29.2 55 0.0019 20.9 3.4 35 11-45 118-152 (160)
45 3kxe_A Toxin protein PARE-1; c 29.1 36 0.0012 20.8 2.3 18 8-25 15-32 (110)
46 3oei_C RELK (toxin RV3358); to 29.1 51 0.0017 20.0 3.0 15 7-21 11-25 (96)
47 4fxi_A MRNA interferase RELE; 28.9 31 0.001 20.8 1.9 16 9-24 3-18 (95)
48 2elt_A Zinc finger protein 406 28.5 12 0.0004 16.9 -0.0 11 106-116 10-21 (36)
49 2ely_A Zinc finger protein 224 28.1 25 0.00086 16.9 1.3 13 105-117 12-25 (46)
50 1m0j_A Metallothionein MT_NC; 28.0 25 0.00087 16.7 1.1 11 105-115 8-18 (28)
51 1e5p_A Aphrodisin; lipocalin, 28.0 53 0.0018 20.6 3.1 35 11-45 116-150 (151)
52 3g5o_B Uncharacterized protein 27.9 16 0.00055 22.2 0.5 18 6-23 15-32 (102)
53 2hq2_A Putative heme/hemoglobi 27.6 44 0.0015 25.3 3.0 35 9-46 229-263 (354)
54 2yti_A Zinc finger protein 347 27.2 21 0.00071 17.2 0.8 12 105-116 12-24 (46)
55 2ep1_A Zinc finger protein 484 27.2 22 0.00076 17.1 0.9 12 105-116 12-24 (46)
56 2epc_A Zinc finger protein 32; 26.8 14 0.00046 17.5 0.0 11 106-116 12-23 (42)
57 1bhi_A CRE-BP1, ATF-2; CRE bin 26.8 13 0.00045 17.1 -0.0 11 106-116 7-20 (38)
58 2els_A Zinc finger protein 406 26.6 16 0.00054 16.6 0.2 11 106-116 10-21 (36)
59 2eou_A Zinc finger protein 473 26.4 20 0.00069 17.2 0.6 12 105-116 12-24 (44)
60 2elv_A Zinc finger protein 406 26.3 17 0.00057 16.5 0.3 11 106-116 10-21 (36)
61 1va1_A Transcription factor SP 26.2 14 0.00047 17.1 -0.0 11 106-116 9-22 (37)
62 2eq1_A Zinc finger protein 347 26.1 22 0.00074 17.2 0.7 12 105-116 12-24 (46)
63 2eq2_A Zinc finger protein 347 26.1 24 0.00082 17.0 0.9 12 105-116 12-24 (46)
64 1njq_A Superman protein; zinc- 26.0 16 0.00056 17.0 0.2 11 106-116 7-18 (39)
65 2l0z_A Glycoprotein G2; zinc-b 25.7 27 0.00094 18.1 1.1 9 104-112 20-28 (42)
66 3iuf_A Zinc finger protein UBI 25.7 14 0.00049 18.5 -0.0 11 106-116 8-19 (48)
67 2en7_A Zinc finger protein 268 25.7 28 0.00097 16.4 1.2 12 105-116 12-24 (44)
68 2eoh_A Zinc finger protein 28 25.6 23 0.0008 17.1 0.8 12 105-116 12-24 (46)
69 3ipz_A Monothiol glutaredoxin- 25.5 53 0.0018 19.7 2.6 28 13-45 3-34 (109)
70 2epx_A Zinc finger protein 28 25.3 24 0.0008 17.0 0.8 12 105-116 12-24 (47)
71 2yte_A Zinc finger protein 473 25.1 38 0.0013 15.7 1.6 11 106-116 11-22 (42)
72 2eom_A ZFP-95, zinc finger pro 25.1 28 0.00095 16.8 1.1 12 105-116 12-24 (46)
73 2eps_A POZ-, at HOOK-, and zin 24.9 30 0.001 17.5 1.2 11 106-116 42-53 (54)
74 3s26_A Neutrophil gelatinase-a 24.8 1.1E+02 0.0038 20.1 4.4 34 12-45 145-178 (190)
75 2enh_A Zinc finger protein 28 24.8 29 0.00099 16.7 1.1 13 105-117 12-25 (46)
76 4ayb_P DNA-directed RNA polyme 24.7 29 0.00098 18.6 1.1 11 106-116 4-15 (48)
77 1ncs_A Peptide M30F, transcrip 24.7 20 0.00068 17.7 0.4 13 105-117 18-33 (47)
78 2yu5_A Zinc finger protein 473 24.7 20 0.00069 17.1 0.4 11 106-116 13-24 (44)
79 2ytm_A Zinc finger protein 28 24.6 22 0.00076 17.2 0.6 12 105-116 12-24 (46)
80 2emg_A Zinc finger protein 484 24.5 21 0.00072 17.2 0.5 12 105-116 12-24 (46)
81 2epz_A Zinc finger protein 28 24.4 19 0.00064 17.4 0.3 12 105-116 12-24 (46)
82 2ytr_A Zinc finger protein 347 24.4 26 0.0009 16.8 0.9 12 105-116 12-24 (46)
83 1lcs_A Feline leukemia virus r 24.4 22 0.00076 25.0 0.7 41 8-54 162-202 (211)
84 1xn7_A Hypothetical protein YH 24.3 60 0.0021 18.8 2.6 33 9-44 24-56 (78)
85 2eoy_A Zinc finger protein 473 24.3 21 0.00073 17.3 0.5 11 106-116 13-24 (46)
86 2el5_A Zinc finger protein 268 23.8 17 0.00057 17.2 0.0 11 106-116 11-22 (42)
87 2yth_A Zinc finger protein 224 23.7 26 0.00088 16.9 0.8 11 106-116 13-24 (46)
88 1xhj_A Nitrogen fixation prote 23.6 1.2E+02 0.0042 18.0 4.5 15 15-29 13-27 (88)
89 1aol_A GP70, SU; coat protein, 23.5 32 0.0011 24.5 1.5 42 8-54 178-219 (228)
90 2enf_A Zinc finger protein 347 23.5 31 0.0011 16.5 1.1 12 105-116 12-24 (46)
91 2elq_A Zinc finger protein 406 22.8 21 0.0007 16.1 0.2 11 106-116 10-21 (36)
92 3tbm_A Putative uncharacterize 22.7 27 0.00092 20.2 0.8 10 106-115 42-51 (69)
93 2en9_A Zinc finger protein 28 22.6 24 0.00083 17.0 0.5 12 105-116 12-24 (46)
94 3nrl_A Uncharacterized protein 22.5 39 0.0013 20.1 1.5 32 85-116 8-39 (81)
95 2eoq_A Zinc finger protein 224 22.5 29 0.00099 16.6 0.8 12 105-116 12-24 (46)
96 2yrm_A B-cell lymphoma 6 prote 22.3 29 0.00098 16.5 0.8 11 106-116 11-22 (43)
97 2em6_A Zinc finger protein 224 22.3 34 0.0012 16.4 1.1 12 105-116 12-24 (46)
98 2en3_A ZFP-95, zinc finger pro 22.3 25 0.00084 16.9 0.5 11 106-116 13-24 (46)
99 2ba3_A NIKA; dimer, bacterial 22.3 90 0.0031 16.0 2.9 24 7-30 16-39 (51)
100 2eon_A ZFP-95, zinc finger pro 21.8 20 0.0007 17.4 0.1 12 105-116 12-24 (46)
101 2cpg_A REPA protein, transcrip 21.8 47 0.0016 16.4 1.6 24 7-30 3-26 (45)
102 2yrj_A Zinc finger protein 473 21.7 19 0.00067 17.3 0.0 11 106-116 13-24 (46)
103 2elz_A Zinc finger protein 224 21.6 26 0.00088 16.9 0.5 12 105-116 12-24 (46)
104 2en2_A B-cell lymphoma 6 prote 21.6 19 0.00066 16.9 -0.0 11 106-116 12-23 (42)
105 2eln_A Zinc finger protein 406 21.6 19 0.00067 17.6 -0.0 11 106-116 10-23 (38)
106 3bpq_B Toxin RELE3; protein to 21.5 20 0.00068 20.2 0.0 10 11-20 3-12 (88)
107 2emi_A Zinc finger protein 484 21.5 20 0.00068 17.3 0.0 11 106-116 13-24 (46)
108 2vo9_A EAD500, L-alanyl-D-glut 21.4 67 0.0023 21.6 2.7 26 12-37 32-57 (179)
109 2eof_A Zinc finger protein 268 21.3 20 0.00067 17.0 -0.0 11 106-116 13-24 (44)
110 2yts_A Zinc finger protein 484 21.2 20 0.00069 17.2 0.0 11 106-116 13-24 (46)
111 2hgo_A CASSIICOLIN; toxin, dis 21.2 14 0.00048 17.0 -0.5 9 106-114 12-22 (27)
112 2epv_A Zinc finger protein 268 21.1 24 0.00082 16.9 0.3 11 106-116 13-24 (44)
113 2epw_A Zinc finger protein 268 21.0 27 0.00092 16.7 0.5 11 106-116 13-24 (46)
114 2ytg_A ZFP-95, zinc finger pro 20.9 27 0.00091 16.8 0.5 11 106-116 13-24 (46)
115 2emb_A Zinc finger protein 473 20.9 20 0.0007 17.1 -0.0 11 106-116 13-24 (44)
116 2eov_A Zinc finger protein 484 20.8 28 0.00097 16.6 0.6 12 105-116 12-24 (46)
117 2emz_A ZFP-95, zinc finger pro 20.8 38 0.0013 16.2 1.1 12 105-116 12-24 (46)
118 1bj7_A D 2; allergen, lipocali 20.6 80 0.0027 19.9 2.9 33 12-44 122-154 (156)
119 2ept_A Zinc finger protein 32; 20.6 25 0.00085 16.4 0.3 11 106-116 11-22 (41)
120 2em3_A Zinc finger protein 28 20.5 21 0.00073 17.2 0.0 11 106-116 13-24 (46)
121 1r44_A D-alanyl-D-alanine dipe 20.4 1.6E+02 0.0056 20.2 4.6 32 7-40 36-67 (202)
122 3fiq_A OBP1, RCG36470, odorant 20.3 66 0.0023 20.6 2.4 33 12-44 123-155 (157)
123 2ytp_A Zinc finger protein 484 20.3 22 0.00075 17.2 0.0 11 106-116 13-24 (46)
124 1yui_A GAGA-factor; complex (D 20.1 25 0.00085 17.8 0.2 11 106-116 25-36 (54)
125 2ep3_A Zinc finger protein 484 20.1 22 0.00076 17.1 0.0 11 106-116 13-24 (46)
126 1wge_A Hypothetical protein 26 20.1 28 0.00095 20.8 0.5 12 106-117 31-42 (83)
No 1
>1r94_A Protein YFHF; tetrameric, beta barrel, iron-sulfur cluster protein, pseudo-symmetric motifs, metal transport; 2.30A {Escherichia coli} SCOP: b.124.1.1 PDB: 1r95_A 1s98_A
Probab=100.00 E-value=2.1e-42 Score=229.96 Aligned_cols=109 Identities=32% Similarity=0.686 Sum_probs=92.5
Q ss_pred cceeeCHHHHHHHHHHHHhcCCCCccEEEEEeCCCCCCeEEEEEEccCCCCCCeEEEeCCEEEEEcccchhhccCcEEEE
Q psy9411 9 ISITLTEVAIKKVSHLIKKKGNLNLKLRVFIQGGGCSGFQYGFMFDEHTNKDDIIFKKNGIQLLIDSVSYQYLIGSEIDY 88 (118)
Q Consensus 9 ~~I~IT~~A~~~l~~~~~~~~~~~~~lRi~v~~~GC~G~~~~l~~~~~~~~~D~v~~~~gi~v~id~~~~~~l~g~~IDy 88 (118)
|+|+|||+|+++|+++++.++. +.+|||+|+++||+|++|+|.+++++.++|.+++.+|++|+||+.+++||+|++|||
T Consensus 1 M~I~iT~~A~~~l~~ll~~~~~-~~~LRv~V~~gGCsG~~y~l~~~~~~~~~D~v~e~~Gv~v~vd~~s~~~L~g~~IDy 79 (118)
T 1r94_A 1 MSITLSDSAAARVNTFLANRGK-GFGLRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDF 79 (118)
T ss_dssp CCCEECHHHHHHHHHHHHHHCC-CSEEEEEEEECSSSCEEEEEEEESSCCTTEEEEEETTEEEEEEGGGHHHHTTCEEEE
T ss_pred CceEECHHHHHHHHHHHhhCCC-CceEEEEEECCCCCCeEEEEEEccCCCCCceEEEECCEEEEEEHHHHHHhCCCEEEE
Confidence 7899999999999999988754 578999999999999999999987789999999999999999999999999999999
Q ss_pred EeCCCCceEEEecCCCCCCCCCCCCCCcCC
Q psy9411 89 KDDLDGSKFVIKNPNAVTTCGCGSSFSTYK 118 (118)
Q Consensus 89 ~~~~~~~gF~i~~p~~~~~CgCG~sf~~~~ 118 (118)
.++..+++|+|.|||++.+||||+||++++
T Consensus 80 ~~~~~g~gF~~~NPna~~~CgCG~SF~~~~ 109 (118)
T 1r94_A 80 VKEGLNEGFKFTNPNVKDECGCGESFKLAA 109 (118)
T ss_dssp EEETTEEEEEEECTTCCC------------
T ss_pred EcCCCcCceEEeCCCCCCCCCCCCCcCCCC
Confidence 999999999999999999999999999863
No 2
>1nwb_A Hypothetical protein AQ_1857; QR6, structural genomics, protein structure initiative, NESG, reduced dimensionality PSI; NMR {Aquifex aeolicus} SCOP: b.124.1.1
Probab=100.00 E-value=1.1e-42 Score=233.13 Aligned_cols=112 Identities=38% Similarity=0.729 Sum_probs=90.7
Q ss_pred CCcceeeCHHHHHHHHHHHHhcCCCCccEEEEEeCCCCCCeEEEEEEccCCCCCCeEEEeCCEEEEEcccchhhccCcEE
Q psy9411 7 NNISITLTEVAIKKVSHLIKKKGNLNLKLRVFIQGGGCSGFQYGFMFDEHTNKDDIIFKKNGIQLLIDSVSYQYLIGSEI 86 (118)
Q Consensus 7 ~~~~I~IT~~A~~~l~~~~~~~~~~~~~lRi~v~~~GC~G~~~~l~~~~~~~~~D~v~~~~gi~v~id~~~~~~l~g~~I 86 (118)
.+|+|+|||+|+++|+++++.++.++.+|||+|+++||+|++|+|.+++++.++|.+++.+|++|+||+.+++||+|++|
T Consensus 6 ~~m~I~iT~~A~~~l~~ll~~~~~~~~~LRv~V~~gGCsG~~y~l~~~~~~~~~D~v~e~~Gv~v~VD~~s~~~L~G~~I 85 (124)
T 1nwb_A 6 QQFIFKVTDKAVEEIKKVAQENNIENPILRIRVVPGGCSGFQYAMGFDDTVEEGDHVFEYDGVKVVIDPFSMPYVNGAEL 85 (124)
T ss_dssp CCCCCEECHHHHHHHHHHHHTTTCSSCEEEECCCCCCTTCCCCCCCEECSCCSSCCCCCCSSSEEEECTTTGGGSTTCEE
T ss_pred cCceEEECHHHHHHHHHHHhhCCCCCceEEEEEEcCCCCCcEEEEEEccCCCCCceEEEeCCEEEEEehHHHHHhCCCEE
Confidence 35899999999999999999877556789999999999999999999987789999999999999999999999999999
Q ss_pred EEEeCCCCceEEEecCCCCCCCCCCCCCCcCC
Q psy9411 87 DYKDDLDGSKFVIKNPNAVTTCGCGSSFSTYK 118 (118)
Q Consensus 87 Dy~~~~~~~gF~i~~p~~~~~CgCG~sf~~~~ 118 (118)
||.+++.+++|+|.|||++.+||||+||++++
T Consensus 86 Dy~~~~~g~gF~~~NPna~~~CgCG~SF~~~~ 117 (124)
T 1nwb_A 86 DYVVDFMGGGFTIRNPNATGSCGCGSSFSCGL 117 (124)
T ss_dssp EEEEETTEEEEEEECC----------------
T ss_pred EEEcCCCcceEEEeCCCCCcCCCCCCCcCCCc
Confidence 99999999999999999999999999999863
No 3
>1x0g_A ISCA; [2Fe-2S], biosynthesis, cyanobacteria, domain swapping, Fe- S cluster, iron, iron-sulfur cluster protein, scaffold, sulfur; 2.50A {Thermosynechococcus elongatus}
Probab=100.00 E-value=2e-42 Score=228.13 Aligned_cols=109 Identities=28% Similarity=0.539 Sum_probs=97.8
Q ss_pred ceeeCHHHHHHHHHHHHhc-CCC-CccEEEEEeCCCCCCeEEEEEEccCCCCCCeEEEeCCEEEEEcccchhhccCcEEE
Q psy9411 10 SITLTEVAIKKVSHLIKKK-GNL-NLKLRVFIQGGGCSGFQYGFMFDEHTNKDDIIFKKNGIQLLIDSVSYQYLIGSEID 87 (118)
Q Consensus 10 ~I~IT~~A~~~l~~~~~~~-~~~-~~~lRi~v~~~GC~G~~~~l~~~~~~~~~D~v~~~~gi~v~id~~~~~~l~g~~ID 87 (118)
||+|||+|+++|+++++.+ +.+ +.+|||+|+++||+|++|+|.+++++.++|.+++.+|++|+||+.+++||+|++||
T Consensus 1 mi~iT~~A~~~l~~ll~~~~~~~~~~~lRv~v~~gGCsG~~y~l~~~~~~~~~D~v~e~~Gv~v~vd~~s~~~l~g~~ID 80 (112)
T 1x0g_A 1 MVELTPAAIQELERLQTHGVRRGQAAILRIQVQPSECGDWRYDLALVAEPKPTDLLTQSQGWTIAIAAEAAELLRGLRVD 80 (112)
T ss_dssp CCEECHHHHHHTCCCC----------CEEEEEEEBSSSSEEEEEEECSSCCTTCEEECSSSCCEEECGGGHHHHTTCEEE
T ss_pred CeEECHHHHHHHHHHHhhccCCCCceEEEEEEEcCCCCCeEEEEEECcCCCCCCEEEEeCCEEEEEeHHHHHHhCCCEEE
Confidence 6999999999999999877 544 56899999999999999999999877899999999999999999999999999999
Q ss_pred EEeCCCCceEEEecCCCCCCCCCCCCCCcCC
Q psy9411 88 YKDDLDGSKFVIKNPNAVTTCGCGSSFSTYK 118 (118)
Q Consensus 88 y~~~~~~~gF~i~~p~~~~~CgCG~sf~~~~ 118 (118)
|.++..+++|+|+|||++.+||||+||++++
T Consensus 81 y~~~~~g~gF~~~nPna~~~CgCG~SF~~~~ 111 (112)
T 1x0g_A 81 YIEDLMGGAFRFHNPNASQTCGCGMAFRVSR 111 (112)
T ss_dssp EEEETTEEEEEEECTTCSEECSSSSEEECCC
T ss_pred EEecCCCCEEEEeCCCCCcCCCCCCccccCC
Confidence 9999999999999999999999999999875
No 4
>2apn_A Protein HI1723; HI1723 solution structure, structural genomics, structure 2 function project, S2F, unknown function; NMR {Haemophilus influenzae}
Probab=100.00 E-value=1.5e-41 Score=224.51 Aligned_cols=110 Identities=55% Similarity=1.042 Sum_probs=103.4
Q ss_pred CCcceeeCHHHHHHHHHHHHhcCCCCccEEEEEeCCCCCCeEEEEEEccCCCCCCeEEEeCCEEEEEcccchhhccCcEE
Q psy9411 7 NNISITLTEVAIKKVSHLIKKKGNLNLKLRVFIQGGGCSGFQYGFMFDEHTNKDDIIFKKNGIQLLIDSVSYQYLIGSEI 86 (118)
Q Consensus 7 ~~~~I~IT~~A~~~l~~~~~~~~~~~~~lRi~v~~~GC~G~~~~l~~~~~~~~~D~v~~~~gi~v~id~~~~~~l~g~~I 86 (118)
++|+|+|||+|+++|+++++.++.++.+|||+|+++||+|++|.|.+++++.++|.+++.+|++|+||+.+++||+|++|
T Consensus 5 ~~~~i~iT~~A~~~i~~l~~~~~~~~~~lRi~v~~gGCsG~~y~l~~~~~~~~~D~v~e~~Gv~v~id~~s~~~l~g~~I 84 (114)
T 2apn_A 5 MAVPLTFTDAAANKVKSLISEEENTDLKLRVYITGGGCSGFQYGFTFDEKVNDGDLTIEKSGVQLVIDPMSLQYLIGGTV 84 (114)
T ss_dssp SCCSCEECSHHHHHHHHHHHHHTCSSCEEEECCCCSSSSCSCCCEEECCSCCSSCEEEECSSSEEEECHHHHHHHTTCEE
T ss_pred CcCcEEECHHHHHHHHHHHHhCCCCCceEEEEEeCCCCCCcEEEEEECcCCCCCCcEEEECCEEEEEehHHHHHhCCCEE
Confidence 34789999999999999998876556789999999999999999999987779999999999999999999999999999
Q ss_pred EEEeCCCCceEEEecCCCCCCCCCCCCCCc
Q psy9411 87 DYKDDLDGSKFVIKNPNAVTTCGCGSSFST 116 (118)
Q Consensus 87 Dy~~~~~~~gF~i~~p~~~~~CgCG~sf~~ 116 (118)
||.++..+++|+|+|||++.+||||+||++
T Consensus 85 Dy~~~~~g~~F~~~nPna~~~CgCG~SF~~ 114 (114)
T 2apn_A 85 DYTEGLEGSRFTVNNPNATSTCGCGSSFSI 114 (114)
T ss_dssp EEECSSSCCEEEEECHHHHCCCCCCCCSCC
T ss_pred EEEcCCCcceEEEeCCCCCcCCCCCCCccC
Confidence 999999999999999999999999999985
No 5
>2d2a_A SUFA protein; iron-sulfur cluster, iron, ISCA, YADR, metal transport; 2.70A {Escherichia coli}
Probab=100.00 E-value=1.8e-40 Score=227.52 Aligned_cols=108 Identities=29% Similarity=0.570 Sum_probs=102.4
Q ss_pred CcceeeCHHHHHHHHHHHHhcCCCCccEEEEEeCCCCCCeEEEEEEccCCCCCCeEEEeCCEEEEEcccchhhccCcEEE
Q psy9411 8 NISITLTEVAIKKVSHLIKKKGNLNLKLRVFIQGGGCSGFQYGFMFDEHTNKDDIIFKKNGIQLLIDSVSYQYLIGSEID 87 (118)
Q Consensus 8 ~~~I~IT~~A~~~l~~~~~~~~~~~~~lRi~v~~~GC~G~~~~l~~~~~~~~~D~v~~~~gi~v~id~~~~~~l~g~~ID 87 (118)
+|.|+|||+|+++|++++++++. +.+|||+|+++||+|++|+|.++++++++|.+++.+|++|+||+.+++||+|++||
T Consensus 38 ~m~ItiTe~Aa~~lk~ll~~~~~-~~~LRv~V~~gGCsG~~Y~l~l~~~~~~~D~v~e~~Gv~v~VD~~s~~~L~G~~ID 116 (145)
T 2d2a_A 38 WQGLTLTPAAAIHIRELVAKQPG-MVGVRLGVKQTGCAGFGYVLDSVSEPDKDDLLFEHDGAKLFVPLQAMPFIDGTEVD 116 (145)
T ss_dssp CCCCEECHHHHHHHHHHHHHSTT-CCEEEEEEEEETTTEEEEEEEEESSCCTTEEEEEETTEEEEEEGGGHHHHTTCEEE
T ss_pred cceEEECHHHHHHHHHHHhcCCC-CceEEEEEECCCCCCcEEEEEECcCCCCCCeEEEECCEEEEEeHHHHHhhCCCEEE
Confidence 58899999999999999988753 57899999999999999999999878899999999999999999999999999999
Q ss_pred EEeCCCCceEEEecCCCCCCCCCCCCCCc
Q psy9411 88 YKDDLDGSKFVIKNPNAVTTCGCGSSFST 116 (118)
Q Consensus 88 y~~~~~~~gF~i~~p~~~~~CgCG~sf~~ 116 (118)
|.++..+++|+|+|||++.+||||+||++
T Consensus 117 y~e~l~g~gF~f~NPna~~~CGCG~SF~v 145 (145)
T 2d2a_A 117 FVREGLNQIFKFHNPKAQNECGCGESFGV 145 (145)
T ss_dssp EEEETTEEEEEEECTTTCSCCCCBCEEEC
T ss_pred EEcCCCcceEEEeCCCCCcccCCCCCccC
Confidence 99999999999999999999999999974
No 6
>2k4z_A DSRR; ISCA/SUFA/HESB like fold, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Allochromatium vinosum}
Probab=99.97 E-value=1.2e-30 Score=174.89 Aligned_cols=101 Identities=24% Similarity=0.374 Sum_probs=94.0
Q ss_pred CCCcceeeCHHHHHHHHHHHHhcCCCCccEEEEEe--CCCCCCeEEEEEEccCCCCCCeEEEeCCEEEEEcccchhhccC
Q psy9411 6 KNNISITLTEVAIKKVSHLIKKKGNLNLKLRVFIQ--GGGCSGFQYGFMFDEHTNKDDIIFKKNGIQLLIDSVSYQYLIG 83 (118)
Q Consensus 6 ~~~~~I~IT~~A~~~l~~~~~~~~~~~~~lRi~v~--~~GC~G~~~~l~~~~~~~~~D~v~~~~gi~v~id~~~~~~l~g 83 (118)
..+|+|+||++|+++|++++++++.++.+|||+|+ ++| |++|+|.++++ .++|.+++.+|++|+||+.+++||+|
T Consensus 18 ~~~m~ItiT~~Aa~~ik~ll~~~~~~~~~LRv~V~~~~gG--G~~Y~l~l~~~-~~~D~v~e~~Gv~v~VD~~s~~~L~G 94 (125)
T 2k4z_A 18 GSHMMFKLTPAAAEQVLKAAKQGGTEGMCLRLAAGRNPDG--SIDYRMGFDDL-TEDDIRLTSEGVEIVIAPDYVSLLDQ 94 (125)
T ss_dssp CCSSCEEECHHHHHHHHHHHHHSSSTTCEEEEEEEECTTS--CEEEEEEEECC-CSSSCEEECSSCEEECCTTTHHHHTT
T ss_pred CCCCEEEECHHHHHHHHHHHhhCCCCCceEEEEEEecCCC--CEEEEEEecCC-CCCceEEEECCEEEEEeHHHHHhhCC
Confidence 45799999999999999999988655578999999 888 99999999987 89999999999999999999999999
Q ss_pred cEEEEEe-CCCCceEEEecCCCCCCCC
Q psy9411 84 SEIDYKD-DLDGSKFVIKNPNAVTTCG 109 (118)
Q Consensus 84 ~~IDy~~-~~~~~gF~i~~p~~~~~Cg 109 (118)
++|||.+ +..+++|+|+|||+++.|.
T Consensus 95 ~~IDy~~~~l~g~gF~~~NPna~~~~p 121 (125)
T 2k4z_A 95 TTLDYVELEPGQFHFIFLNPRDPTYRP 121 (125)
T ss_dssp EEEEEEEEETTEEEEEEECSSSCSSCC
T ss_pred CEEEEEeCCCCcCeEEECCCCCCccCC
Confidence 9999999 9999999999999998874
No 7
>2p2e_A Putative Fe-S biosynthesis protein; hypothetical protein, beta-barrel, 10399L structural genomics, protein structure initiative, PSI-2; 2.48A {Lactobacillus salivarius} SCOP: b.124.1.1
Probab=99.90 E-value=2.2e-24 Score=144.85 Aligned_cols=98 Identities=16% Similarity=0.108 Sum_probs=86.3
Q ss_pred CCcceeeCHHHHHHHHHHHHhcCCCCccEEEEEeCC-------CCCC-eEEEEEEccCCCC----CCeEEEeCCEEEEEc
Q psy9411 7 NNISITLTEVAIKKVSHLIKKKGNLNLKLRVFIQGG-------GCSG-FQYGFMFDEHTNK----DDIIFKKNGIQLLID 74 (118)
Q Consensus 7 ~~~~I~IT~~A~~~l~~~~~~~~~~~~~lRi~v~~~-------GC~G-~~~~l~~~~~~~~----~D~v~~~~gi~v~id 74 (118)
|.|.|+||++|+++|+++++.++. ...||+. +++ ||+| ..|.|.+++++.+ .|.+++.++++|+||
T Consensus 1 ~~M~ItlT~~A~~~l~~~l~~~~~-~l~Lr~~-dg~g~y~k~ggCsg~~~Y~l~~v~~~~~~~~~~D~~~e~~g~~v~vd 78 (128)
T 2p2e_A 1 MSLKITVTDDAAKKLQRYTDDSNA-VLLLDFD-DGVGALSKVGVCSLNSDFRILVVSKDMDYKKDYNEVIDSNIGKFYYK 78 (128)
T ss_dssp --CEEEECHHHHHHHHHHHTCTTE-EEEEEEC-SSCSGGGGSSCCCCSCCEEEEEEETTSSCTTTSCEEEEETTSCEEEC
T ss_pred CccEEEECHHHHHHHHHHHhcCCc-eEEEEEe-CCCCccccCCCCCCCCEEEEEEeccCCCCCCCCCEEEEeCCEEEEEC
Confidence 358899999999999999987753 3689999 666 7999 5999999887777 899999999999999
Q ss_pred ccchhhccC-cEEEEEeCC----CCce-EEEecCCCCC
Q psy9411 75 SVSYQYLIG-SEIDYKDDL----DGSK-FVIKNPNAVT 106 (118)
Q Consensus 75 ~~~~~~l~g-~~IDy~~~~----~~~g-F~i~~p~~~~ 106 (118)
+.++.||+| ++|||.++. .+++ |.|.|||++.
T Consensus 79 ~~s~~~ldgg~~iDy~~~~~~l~L~s~~f~~~NPN~~~ 116 (128)
T 2p2e_A 79 GYSKMYMDDNMKISLNTNNSLLRLTGDNSGELMPALSI 116 (128)
T ss_dssp GGGGGGSCSEEEEEECSSSSCEEEEETTTEEEEEEECE
T ss_pred cchHHhhCCCeEEEEeCCCceEEecCCccEEECCCCee
Confidence 999999996 999999998 7889 9999999853
No 8
>2qgo_A Putative Fe-S biosynthesis protein; PSI-2, NYSGXRC, 10399G, Fe-S cluster protein, structural GEN protein structure initiative; 2.04A {Lactobacillus acidophilus}
Probab=99.87 E-value=3.6e-23 Score=140.92 Aligned_cols=92 Identities=17% Similarity=0.342 Sum_probs=74.6
Q ss_pred CCcceeeCHHHHHHHHHHHHhcCCCCccE-------EEEEeCCCCC-CeEEEEEEccCCCCC-CeEEEeC-CEEEEEccc
Q psy9411 7 NNISITLTEVAIKKVSHLIKKKGNLNLKL-------RVFIQGGGCS-GFQYGFMFDEHTNKD-DIIFKKN-GIQLLIDSV 76 (118)
Q Consensus 7 ~~~~I~IT~~A~~~l~~~~~~~~~~~~~l-------Ri~v~~~GC~-G~~~~l~~~~~~~~~-D~v~~~~-gi~v~id~~ 76 (118)
.+|.|+||++|+++|+++++.++ ...| |+.+.++||+ |++|.|.+++++.++ |.+++.+ |++|+||+.
T Consensus 2 ~~M~ItlTd~Aa~~ik~~l~~~~--~l~L~~~Dgv~r~~v~gGGCSiG~~Y~l~~~~e~~~dyD~~~e~~gGv~v~Vd~~ 79 (141)
T 2qgo_A 2 SLLNIKFTDNAVDYLKRREILDK--ILILITDDGGGKYSIQGGSCSMGAHFSIIWLDKVDPDYPVKIANEQNVKIYTSDF 79 (141)
T ss_dssp --CBEEECHHHHHHHHHTTCTTS--EEEEEECSSCSTTCC---------CEEEEEESSCCTTCCEECBCSSCCEEEECHH
T ss_pred cceEEEECHHHHHHHHHHHhhcc--ceeeecCCCceEEEEeCccCCCCCEEEEEEeecCCCCCCEEEEeCCCEEEEECch
Confidence 35889999999999999998764 5789 9999999999 999999999888889 9999999 599999999
Q ss_pred chhhcc-CcEEEEEeCCCCceEEEecCCC
Q psy9411 77 SYQYLI-GSEIDYKDDLDGSKFVIKNPNA 104 (118)
Q Consensus 77 ~~~~l~-g~~IDy~~~~~~~gF~i~~p~~ 104 (118)
+++||+ |++|||.++ .|.+++|..
T Consensus 80 sl~yLd~G~~IDy~~~----~l~Lks~sg 104 (141)
T 2qgo_A 80 DKTMLGPNMVMDYNAG----SLSLSSDEG 104 (141)
T ss_dssp HHTTSCSSEEEEEETT----EEEEEETTE
T ss_pred HHHHhcCCCEEeEECC----EEEEcCCCc
Confidence 999999 999999964 799988764
No 9
>2k02_A Ferrous iron transport protein C; FEOC, iron-sulfur, metal-binding, metal binding protein; NMR {Klebsiella pneumoniae subsp}
Probab=50.81 E-value=24 Score=21.15 Aligned_cols=33 Identities=15% Similarity=0.280 Sum_probs=24.4
Q ss_pred cceeeCHHHHHHHHHHHHhcCCCCccEEEEEeCCCC
Q psy9411 9 ISITLTEVAIKKVSHLIKKKGNLNLKLRVFIQGGGC 44 (118)
Q Consensus 9 ~~I~IT~~A~~~l~~~~~~~~~~~~~lRi~v~~~GC 44 (118)
-.+.+|+.++.+..+.|.+++ .-.|+.....||
T Consensus 24 ~~l~VS~~TIRrDL~~Le~~G---~l~R~~~~~~~C 56 (87)
T 2k02_A 24 ARLQTPQPLIDAMLERMEAMG---KVVRISETSEGC 56 (87)
T ss_dssp HHTTCCHHHHHHHHHHHHTTC---CSEEEEEECCSS
T ss_pred HHHCcCHHHHHHHHHHHHHCC---CEEEEecCCCCC
Confidence 356788888888888888875 567886555666
No 10
>2a6s_A Toxin YOEB; YEFM, antitoxin, addiction modules, RNAse, inhibitor; 1.77A {Escherichia coli} SCOP: d.298.1.1 PDB: 2a6r_A 2a6q_E
Probab=50.65 E-value=12 Score=21.36 Aligned_cols=16 Identities=6% Similarity=0.034 Sum_probs=13.2
Q ss_pred cceeeCHHHHHHHHHH
Q psy9411 9 ISITLTEVAIKKVSHL 24 (118)
Q Consensus 9 ~~I~IT~~A~~~l~~~ 24 (118)
|.|.+|+.|.+.++++
T Consensus 1 m~i~~t~~a~kdl~~l 16 (84)
T 2a6s_A 1 MKLIWSEESWDDYLYW 16 (84)
T ss_dssp CEEEECHHHHHHHHHH
T ss_pred CeEEECHHHHHHHHHH
Confidence 5788999998888766
No 11
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=50.45 E-value=6.1 Score=17.04 Aligned_cols=10 Identities=40% Similarity=1.325 Sum_probs=7.7
Q ss_pred CCC-CCCCCCc
Q psy9411 107 TCG-CGSSFST 116 (118)
Q Consensus 107 ~Cg-CG~sf~~ 116 (118)
.|. ||.+|..
T Consensus 4 ~C~~C~k~f~~ 14 (30)
T 1paa_A 4 ACGLCNRAFTR 14 (30)
T ss_dssp BCTTTCCBCSS
T ss_pred CCcccCcccCC
Confidence 575 9999974
No 12
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=50.12 E-value=9.3 Score=16.01 Aligned_cols=11 Identities=27% Similarity=0.866 Sum_probs=8.1
Q ss_pred CCC-CCCCCCcC
Q psy9411 107 TCG-CGSSFSTY 117 (118)
Q Consensus 107 ~Cg-CG~sf~~~ 117 (118)
.|. ||.+|..+
T Consensus 4 ~C~~C~~~f~~~ 15 (29)
T 2m0e_A 4 KCPHCDKKFNQV 15 (29)
T ss_dssp CCSSCCCCCCTT
T ss_pred cCCCCCcccCCH
Confidence 575 99999743
No 13
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=52.98 E-value=4 Score=17.23 Aligned_cols=10 Identities=40% Similarity=1.155 Sum_probs=7.4
Q ss_pred CCC-CCCCCCc
Q psy9411 107 TCG-CGSSFST 116 (118)
Q Consensus 107 ~Cg-CG~sf~~ 116 (118)
.|. ||.+|..
T Consensus 4 ~C~~C~k~f~~ 14 (26)
T 2lvu_A 4 VCERCGKRFVQ 14 (26)
Confidence 564 9999874
No 14
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=47.06 E-value=6.8 Score=16.41 Aligned_cols=10 Identities=50% Similarity=1.225 Sum_probs=7.4
Q ss_pred CCC-CCCCCCc
Q psy9411 107 TCG-CGSSFST 116 (118)
Q Consensus 107 ~Cg-CG~sf~~ 116 (118)
.|. ||.+|..
T Consensus 3 ~C~~C~k~f~~ 13 (27)
T 1znf_A 3 KCGLCERSFVE 13 (27)
T ss_dssp BCSSSCCBCSS
T ss_pred cCCCCCCcCCC
Confidence 464 9999974
No 15
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=46.64 E-value=9.6 Score=16.13 Aligned_cols=10 Identities=20% Similarity=0.551 Sum_probs=7.6
Q ss_pred CCC-CCCCCCc
Q psy9411 107 TCG-CGSSFST 116 (118)
Q Consensus 107 ~Cg-CG~sf~~ 116 (118)
.|. ||.+|..
T Consensus 4 ~C~~C~k~f~~ 14 (30)
T 1klr_A 4 QCQYCEFRSAD 14 (30)
T ss_dssp CCSSSSCCCSC
T ss_pred cCCCCCCccCC
Confidence 575 9999974
No 16
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=45.51 E-value=7.2 Score=16.56 Aligned_cols=10 Identities=30% Similarity=0.996 Sum_probs=7.7
Q ss_pred CCC-CCCCCCc
Q psy9411 107 TCG-CGSSFST 116 (118)
Q Consensus 107 ~Cg-CG~sf~~ 116 (118)
.|. ||.+|..
T Consensus 4 ~C~~C~~~f~~ 14 (29)
T 1ard_A 4 VCEVCTRAFAR 14 (29)
T ss_dssp BCTTTCCBCSS
T ss_pred ECCCCCcccCC
Confidence 575 9999974
No 17
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=42.90 E-value=6.7 Score=16.71 Aligned_cols=10 Identities=30% Similarity=0.856 Sum_probs=7.2
Q ss_pred CCC-CCCCCCc
Q psy9411 107 TCG-CGSSFST 116 (118)
Q Consensus 107 ~Cg-CG~sf~~ 116 (118)
.|. ||.+|..
T Consensus 4 ~C~~C~k~f~~ 14 (29)
T 1rik_A 4 ACPECPKRFMR 14 (29)
T ss_dssp ECSSSSCEESC
T ss_pred cCCCCCchhCC
Confidence 464 8988874
No 18
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=42.30 E-value=6.1 Score=16.74 Aligned_cols=10 Identities=20% Similarity=0.677 Sum_probs=7.4
Q ss_pred CCC-CCCCCCc
Q psy9411 107 TCG-CGSSFST 116 (118)
Q Consensus 107 ~Cg-CG~sf~~ 116 (118)
.|. ||.+|..
T Consensus 5 ~C~~C~k~f~~ 15 (27)
T 2kvh_A 5 SCSLCPQRSRD 15 (27)
T ss_dssp ECSSSSCEESS
T ss_pred cCCCcChhhCC
Confidence 565 9999874
No 19
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=40.50 E-value=6.8 Score=16.68 Aligned_cols=10 Identities=60% Similarity=1.361 Sum_probs=7.3
Q ss_pred CCC-CCCCCCc
Q psy9411 107 TCG-CGSSFST 116 (118)
Q Consensus 107 ~Cg-CG~sf~~ 116 (118)
.|. ||.+|..
T Consensus 5 ~C~~C~~~f~~ 15 (30)
T 2m0d_A 5 QCDYCGRSFSD 15 (30)
T ss_dssp ECTTTCCEESC
T ss_pred cCCCCCcccCC
Confidence 465 9998863
No 20
>1wmi_A RELE, hypothetical protein PHS013; toxin-antitoxin complex, hydrolase-hydrolase inhibitor compl; 2.30A {Pyrococcus horikoshii} SCOP: d.298.1.2
Probab=39.70 E-value=7.9 Score=21.97 Aligned_cols=16 Identities=13% Similarity=0.341 Sum_probs=10.7
Q ss_pred cceeeCHHHHHHHHHH
Q psy9411 9 ISITLTEVAIKKVSHL 24 (118)
Q Consensus 9 ~~I~IT~~A~~~l~~~ 24 (118)
+.|.+|+.|.+.|+++
T Consensus 3 ~~i~~~~~a~~dl~~l 18 (90)
T 1wmi_A 3 YRVKIHKQVVKALQSL 18 (90)
T ss_dssp SEEEEEHHHHHHHTTS
T ss_pred EEEEECHHHHHHHHHC
Confidence 4577788877766543
No 21
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=39.36 E-value=15 Score=16.49 Aligned_cols=11 Identities=27% Similarity=0.712 Sum_probs=8.1
Q ss_pred CCCC-CCCCCCc
Q psy9411 106 TTCG-CGSSFST 116 (118)
Q Consensus 106 ~~Cg-CG~sf~~ 116 (118)
-.|. ||.+|..
T Consensus 3 ~~C~~C~k~F~~ 14 (33)
T 1rim_A 3 FACPECPKRFMR 14 (33)
T ss_dssp CCCSSSCCCCSS
T ss_pred ccCCCCCchhCC
Confidence 3575 9999974
No 22
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=45.30 E-value=6.4 Score=16.92 Aligned_cols=10 Identities=40% Similarity=1.198 Sum_probs=7.3
Q ss_pred CCC-CCCCCCc
Q psy9411 107 TCG-CGSSFST 116 (118)
Q Consensus 107 ~Cg-CG~sf~~ 116 (118)
.|. ||.+|..
T Consensus 4 ~C~~C~k~f~~ 14 (29)
T 2lvt_A 4 QCVMCGKAFTQ 14 (29)
Confidence 465 9999874
No 23
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=38.79 E-value=12 Score=17.14 Aligned_cols=11 Identities=45% Similarity=0.917 Sum_probs=8.5
Q ss_pred CCCC-CCCCCCc
Q psy9411 106 TTCG-CGSSFST 116 (118)
Q Consensus 106 ~~Cg-CG~sf~~ 116 (118)
-.|. ||.+|..
T Consensus 12 ~~C~~C~k~f~~ 23 (37)
T 1p7a_A 12 FQCPDCDRSFSR 23 (37)
T ss_dssp BCCTTTCCCBSS
T ss_pred ccCCCCCcccCc
Confidence 4675 9999974
No 24
>2khe_A Toxin RELE, toxin-like protein; toxin-antitoxin, RNAse, plasmid, hydrolase, structural genomics, NPPSFA; NMR {Thermus thermophilus}
Probab=38.39 E-value=8.5 Score=21.77 Aligned_cols=14 Identities=21% Similarity=0.207 Sum_probs=8.5
Q ss_pred cceeeCHHHHHHHH
Q psy9411 9 ISITLTEVAIKKVS 22 (118)
Q Consensus 9 ~~I~IT~~A~~~l~ 22 (118)
+.|.+|+.|.+.|+
T Consensus 3 ~~i~~~~~a~~dl~ 16 (89)
T 2khe_A 3 YRIEFDPRAEKELE 16 (89)
T ss_dssp CEEEECTTHHHHHH
T ss_pred eEEEECHHHHHHHH
Confidence 45666766665554
No 25
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=38.32 E-value=7.9 Score=16.39 Aligned_cols=10 Identities=50% Similarity=1.308 Sum_probs=7.3
Q ss_pred CCC-CCCCCCc
Q psy9411 107 TCG-CGSSFST 116 (118)
Q Consensus 107 ~Cg-CG~sf~~ 116 (118)
.|. ||.+|..
T Consensus 5 ~C~~C~k~f~~ 15 (28)
T 2kvf_A 5 SCSVCGKRFSL 15 (28)
T ss_dssp ECSSSCCEESC
T ss_pred cCCCCCcccCC
Confidence 464 9998874
No 26
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=43.82 E-value=6.9 Score=16.77 Aligned_cols=10 Identities=30% Similarity=0.853 Sum_probs=7.3
Q ss_pred CCC-CCCCCCc
Q psy9411 107 TCG-CGSSFST 116 (118)
Q Consensus 107 ~Cg-CG~sf~~ 116 (118)
.|. ||.+|..
T Consensus 5 ~C~~C~k~f~~ 15 (30)
T 2lvr_A 5 VCIHCQRQFAD 15 (30)
Confidence 565 9998864
No 27
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=35.85 E-value=8.6 Score=16.19 Aligned_cols=10 Identities=50% Similarity=1.331 Sum_probs=7.0
Q ss_pred CCC-CCCCCCc
Q psy9411 107 TCG-CGSSFST 116 (118)
Q Consensus 107 ~Cg-CG~sf~~ 116 (118)
.|. ||.+|..
T Consensus 4 ~C~~C~k~f~~ 14 (29)
T 2m0f_A 4 KCRECGKQFTT 14 (29)
T ss_dssp ECTTTSCEESC
T ss_pred cCCCCCCccCC
Confidence 465 8988863
No 28
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.56 E-value=20 Score=16.05 Aligned_cols=12 Identities=33% Similarity=1.024 Sum_probs=8.9
Q ss_pred CCCCC-CCCCCCc
Q psy9411 105 VTTCG-CGSSFST 116 (118)
Q Consensus 105 ~~~Cg-CG~sf~~ 116 (118)
...|. ||.+|..
T Consensus 9 ~~~C~~C~k~f~~ 21 (36)
T 2elr_A 9 THLCDMCGKKFKS 21 (36)
T ss_dssp SCBCTTTCCBCSS
T ss_pred CeecCcCCCCcCc
Confidence 35776 9999974
No 29
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=35.07 E-value=18 Score=15.75 Aligned_cols=11 Identities=27% Similarity=0.902 Sum_probs=8.4
Q ss_pred CCCC---CCCCCCc
Q psy9411 106 TTCG---CGSSFST 116 (118)
Q Consensus 106 ~~Cg---CG~sf~~ 116 (118)
..|. ||.+|..
T Consensus 4 ~~C~~~~C~k~f~~ 17 (32)
T 1zfd_A 4 YSCDHPGCDKAFVR 17 (32)
T ss_dssp BCCCCTTCCCCBSS
T ss_pred CcCcCCCCCCccCC
Confidence 3684 9999974
No 30
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=34.40 E-value=9.9 Score=17.04 Aligned_cols=11 Identities=27% Similarity=0.754 Sum_probs=8.1
Q ss_pred CCCC-CCCCCCc
Q psy9411 106 TTCG-CGSSFST 116 (118)
Q Consensus 106 ~~Cg-CG~sf~~ 116 (118)
-.|. ||.+|..
T Consensus 8 ~~C~~C~k~f~~ 19 (35)
T 2elx_A 8 YVCALCLKKFVS 19 (35)
T ss_dssp EECSSSCCEESS
T ss_pred eECCCCcchhCC
Confidence 3675 9999874
No 31
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=34.20 E-value=12 Score=16.69 Aligned_cols=10 Identities=30% Similarity=0.790 Sum_probs=7.5
Q ss_pred CCCC-CCCCCC
Q psy9411 106 TTCG-CGSSFS 115 (118)
Q Consensus 106 ~~Cg-CG~sf~ 115 (118)
-.|. ||.+|.
T Consensus 3 ~~C~~C~k~f~ 13 (32)
T 2kfq_A 3 FACPACPKRFM 13 (32)
T ss_dssp SSSSSSCTTHH
T ss_pred CCCCCCCcccC
Confidence 3575 999986
No 32
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.60 E-value=7.2 Score=18.23 Aligned_cols=10 Identities=40% Similarity=0.610 Sum_probs=7.5
Q ss_pred CCC-CCCCCCc
Q psy9411 107 TCG-CGSSFST 116 (118)
Q Consensus 107 ~Cg-CG~sf~~ 116 (118)
.|. ||.+|..
T Consensus 11 ~C~~C~k~f~~ 21 (37)
T 2elm_A 11 YCSQCHYSSIT 21 (37)
T ss_dssp ECSSSSCEEEC
T ss_pred ECCCCCcccCC
Confidence 575 9999864
No 33
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.92 E-value=12 Score=17.18 Aligned_cols=12 Identities=25% Similarity=0.573 Sum_probs=8.6
Q ss_pred CCCC-CCCCCCcC
Q psy9411 106 TTCG-CGSSFSTY 117 (118)
Q Consensus 106 ~~Cg-CG~sf~~~ 117 (118)
-.|. ||.+|..+
T Consensus 10 ~~C~~C~k~f~~~ 22 (37)
T 2elp_A 10 MKCPYCDFYFMKN 22 (37)
T ss_dssp EECSSSSCEECSS
T ss_pred eECCCCChhhccC
Confidence 4675 99998753
No 34
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=32.75 E-value=6.4 Score=16.82 Aligned_cols=10 Identities=20% Similarity=0.760 Sum_probs=7.1
Q ss_pred CCC-CCCCCCc
Q psy9411 107 TCG-CGSSFST 116 (118)
Q Consensus 107 ~Cg-CG~sf~~ 116 (118)
.|. ||.+|..
T Consensus 5 ~C~~C~k~f~~ 15 (27)
T 2kvg_A 5 RCPLCRAGCPS 15 (27)
T ss_dssp EETTTTEEESC
T ss_pred CCCCCCcccCC
Confidence 464 8888864
No 35
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=32.42 E-value=9.5 Score=17.22 Aligned_cols=11 Identities=45% Similarity=0.899 Sum_probs=7.9
Q ss_pred CCCC-CCCCCCc
Q psy9411 106 TTCG-CGSSFST 116 (118)
Q Consensus 106 ~~Cg-CG~sf~~ 116 (118)
-.|. ||.+|..
T Consensus 8 ~~C~~C~k~f~~ 19 (35)
T 1srk_A 8 FVCRICLSAFTT 19 (35)
T ss_dssp EECSSSCCEESS
T ss_pred eeCCCCCcccCC
Confidence 3575 9999864
No 36
>1z8m_A Conserved hypothetical protein HP0894; structural genomics, helicobac pylori, unknown function; NMR {Helicobacter pylori} SCOP: d.298.1.2
Probab=32.14 E-value=31 Score=19.63 Aligned_cols=18 Identities=17% Similarity=0.296 Sum_probs=14.2
Q ss_pred cceeeCHHHHHHHHHHHH
Q psy9411 9 ISITLTEVAIKKVSHLIK 26 (118)
Q Consensus 9 ~~I~IT~~A~~~l~~~~~ 26 (118)
|.|..|++|.+.++++..
T Consensus 2 ~~i~~t~~a~kdlk~l~~ 19 (88)
T 1z8m_A 2 LKLNLKKSFQKDFDKLLL 19 (88)
T ss_dssp CBCCBCHHHHHHHHHHHT
T ss_pred ceEEECHHHHHHHHHHHH
Confidence 568889998888887753
No 37
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=31.93 E-value=56 Score=20.17 Aligned_cols=28 Identities=21% Similarity=0.457 Sum_probs=21.8
Q ss_pred eCHHHHHHHHHHHHhcCCCCccEEEEEeC----CCCC
Q psy9411 13 LTEVAIKKVSHLIKKKGNLNLKLRVFIQG----GGCS 45 (118)
Q Consensus 13 IT~~A~~~l~~~~~~~~~~~~~lRi~v~~----~GC~ 45 (118)
+++++.+++++++... .|-||.++ .+|.
T Consensus 1 ~~~~~~~~v~~~i~~~-----~Vvvfsk~t~~~p~Cp 32 (121)
T 3gx8_A 1 LSTEIRKAIEDAIESA-----PVVLFMKGTPEFPKCG 32 (121)
T ss_dssp -CHHHHHHHHHHHHSC-----SEEEEESBCSSSBCTT
T ss_pred CCHHHHHHHHHHhccC-----CEEEEEeccCCCCCCc
Confidence 4788999999999764 37888886 3887
No 38
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=31.74 E-value=16 Score=15.86 Aligned_cols=11 Identities=36% Similarity=0.939 Sum_probs=8.3
Q ss_pred CCC---CCCCCCCc
Q psy9411 106 TTC---GCGSSFST 116 (118)
Q Consensus 106 ~~C---gCG~sf~~ 116 (118)
-.| .||.+|..
T Consensus 3 ~~C~~~~C~k~f~~ 16 (31)
T 1sp2_A 3 FMCTWSYCGKRFTR 16 (31)
T ss_dssp CBCCSTTCCCBCSS
T ss_pred cCCcCCCCCcccCC
Confidence 357 59999974
No 39
>2otr_A Hypothetical protein HP0892; anti-parallel beta sheet, structural genomics, unknown funct; NMR {Helicobacter pylori}
Probab=31.48 E-value=37 Score=19.83 Aligned_cols=19 Identities=21% Similarity=0.288 Sum_probs=15.4
Q ss_pred cceeeCHHHHHHHHHHHHh
Q psy9411 9 ISITLTEVAIKKVSHLIKK 27 (118)
Q Consensus 9 ~~I~IT~~A~~~l~~~~~~ 27 (118)
|.|.+|+.|.+.|+++...
T Consensus 2 ~~i~~t~~a~kdlk~l~~~ 20 (98)
T 2otr_A 2 LTIETSKKFDKDLKILVKN 20 (98)
T ss_dssp CEEECCHHHHHHHHHHHHH
T ss_pred eeEEECHHHHHHHHHHHHc
Confidence 6788999999988887644
No 40
>3tbo_A Zinc finger, CDGSH-type domain protein; iron-sulfur, metal binding protein; 1.50A {Pyrobaculum calidifontis}
Probab=30.52 E-value=16 Score=20.61 Aligned_cols=10 Identities=50% Similarity=0.813 Sum_probs=8.1
Q ss_pred CCCCCCCCCC
Q psy9411 106 TTCGCGSSFS 115 (118)
Q Consensus 106 ~~CgCG~sf~ 115 (118)
..|.||.|=+
T Consensus 23 ~lC~CG~S~n 32 (60)
T 3tbo_A 23 YLCRCGHSGS 32 (60)
T ss_dssp EECCSSCCTT
T ss_pred EEEECCCCCC
Confidence 5799999855
No 41
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.50 E-value=18 Score=17.11 Aligned_cols=12 Identities=33% Similarity=0.916 Sum_probs=9.0
Q ss_pred CCCCC-CCCCCCc
Q psy9411 105 VTTCG-CGSSFST 116 (118)
Q Consensus 105 ~~~Cg-CG~sf~~ 116 (118)
.-.|. ||.+|..
T Consensus 11 ~~~C~~C~k~f~~ 23 (42)
T 2eos_A 11 PYPCEICGTRFRH 23 (42)
T ss_dssp CBCCSSSCCCBSS
T ss_pred CEECCCCCCccCC
Confidence 34686 9999974
No 42
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.01 E-value=18 Score=17.02 Aligned_cols=11 Identities=45% Similarity=1.150 Sum_probs=8.5
Q ss_pred CCCC-CCCCCCc
Q psy9411 106 TTCG-CGSSFST 116 (118)
Q Consensus 106 ~~Cg-CG~sf~~ 116 (118)
-.|. ||.+|..
T Consensus 12 ~~C~~C~k~f~~ 23 (42)
T 2ytb_A 12 YRCDQCGKAFSQ 23 (42)
T ss_dssp BCCTTTTCCBSS
T ss_pred eeCCCccchhCC
Confidence 4685 9999974
No 43
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.37 E-value=8.2 Score=17.74 Aligned_cols=11 Identities=45% Similarity=0.957 Sum_probs=8.2
Q ss_pred CCCC-CCCCCCc
Q psy9411 106 TTCG-CGSSFST 116 (118)
Q Consensus 106 ~~Cg-CG~sf~~ 116 (118)
..|. ||.+|..
T Consensus 10 ~~C~~C~k~f~~ 21 (37)
T 2elo_A 10 YSCPVCEKSFSE 21 (37)
T ss_dssp CEETTTTEECSS
T ss_pred cCCCCCCCccCC
Confidence 4675 9999874
No 44
>3sao_A Extracellular fatty acid-binding protein; beta-barrel, siderophore binding protein, transport protein; HET: NKN DBH; 1.80A {Gallus gallus} SCOP: b.60.1.1 PDB: 1jzu_A 2kt4_B* 2lbv_A*
Probab=29.20 E-value=55 Score=20.89 Aligned_cols=35 Identities=14% Similarity=0.255 Sum_probs=26.9
Q ss_pred eeeCHHHHHHHHHHHHhcCCCCccEEEEEeCCCCC
Q psy9411 11 ITLTEVAIKKVSHLIKKKGNLNLKLRVFIQGGGCS 45 (118)
Q Consensus 11 I~IT~~A~~~l~~~~~~~~~~~~~lRi~v~~~GC~ 45 (118)
-++++++.+++++.+...+-+...|.+.-..+-|.
T Consensus 118 ~~~~~e~~~~f~~~~~~~G~~~~~i~~~~~~~~C~ 152 (160)
T 3sao_A 118 REVSPTAMAIFRKLARERNYTDEMVAVLPSQAACS 152 (160)
T ss_dssp SSCCHHHHHHHHHHHHTTTCCGGGEEECCCCSSCC
T ss_pred CCCCHHHHHHHHHHHHHcCCCHHHEEECCCCCccC
Confidence 36899999999999999887555566555556775
No 45
>3kxe_A Toxin protein PARE-1; complex, TA system, protein binding; 2.60A {Caulobacter crescentus NA1000}
Probab=29.12 E-value=36 Score=20.76 Aligned_cols=18 Identities=11% Similarity=0.062 Sum_probs=13.3
Q ss_pred CcceeeCHHHHHHHHHHH
Q psy9411 8 NISITLTEVAIKKVSHLI 25 (118)
Q Consensus 8 ~~~I~IT~~A~~~l~~~~ 25 (118)
.+.|.+|+.|.+-|.++.
T Consensus 15 ~~~V~~t~~A~~DL~~I~ 32 (110)
T 3kxe_A 15 MKPYRLSRRAKADLDDIW 32 (110)
T ss_dssp -CCEEEEHHHHHHHHHHH
T ss_pred CeEEEECHHHHHHHHHHH
Confidence 467888888888777664
No 46
>3oei_C RELK (toxin RV3358); toxin-antitoxin systems, protein-protein complex, tuberculos structural genomics consortium, protein binding; HET: MLZ FLC; 2.15A {Mycobacterium tuberculosis} SCOP: d.298.1.0
Probab=29.11 E-value=51 Score=20.00 Aligned_cols=15 Identities=13% Similarity=0.069 Sum_probs=12.5
Q ss_pred CCcceeeCHHHHHHH
Q psy9411 7 NNISITLTEVAIKKV 21 (118)
Q Consensus 7 ~~~~I~IT~~A~~~l 21 (118)
..|.|.+|++|.+.+
T Consensus 11 ~~~~i~ft~~A~kdl 25 (96)
T 3oei_C 11 KVRSVNFDPDAWEDF 25 (96)
T ss_dssp -CCEEEECHHHHHHH
T ss_pred cceEEEECHHHHHHH
Confidence 358899999999987
No 47
>4fxi_A MRNA interferase RELE; toxin/antitoxin system, toxin, nuclease, translational contr response, RELB, ribosome, B-ME on Cys50; HET: CME; 1.80A {Escherichia coli} PDB: 4fxe_D 3kha_A* 4fxh_A* 2kc8_A 2kc9_A 3kiq_y* 3kis_y* 3kiu_y* 3kix_y*
Probab=28.93 E-value=31 Score=20.84 Aligned_cols=16 Identities=25% Similarity=0.299 Sum_probs=12.1
Q ss_pred cceeeCHHHHHHHHHH
Q psy9411 9 ISITLTEVAIKKVSHL 24 (118)
Q Consensus 9 ~~I~IT~~A~~~l~~~ 24 (118)
=.|.+|++|.+.|+++
T Consensus 3 Y~i~f~~~A~K~l~kL 18 (95)
T 4fxi_A 3 YFLDFDERALKEWRKL 18 (95)
T ss_dssp CEEEECHHHHHHHHHS
T ss_pred EEEEECHHHHHHHHhC
Confidence 4688999998877654
No 48
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.52 E-value=12 Score=16.94 Aligned_cols=11 Identities=18% Similarity=0.513 Sum_probs=7.8
Q ss_pred CCCC-CCCCCCc
Q psy9411 106 TTCG-CGSSFST 116 (118)
Q Consensus 106 ~~Cg-CG~sf~~ 116 (118)
..|. ||.+|..
T Consensus 10 ~~C~~C~k~f~~ 21 (36)
T 2elt_A 10 YKCPQCSYASAI 21 (36)
T ss_dssp EECSSSSCEESS
T ss_pred CCCCCCCcccCC
Confidence 3575 9998874
No 49
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=28.12 E-value=25 Score=16.95 Aligned_cols=13 Identities=38% Similarity=0.772 Sum_probs=9.4
Q ss_pred CCCCC-CCCCCCcC
Q psy9411 105 VTTCG-CGSSFSTY 117 (118)
Q Consensus 105 ~~~Cg-CG~sf~~~ 117 (118)
.-.|. ||.+|..+
T Consensus 12 ~~~C~~C~k~f~~~ 25 (46)
T 2ely_A 12 PFKCVECGKGFSRR 25 (46)
T ss_dssp SBCCSSSCCCBSST
T ss_pred CcccCccCcccCCH
Confidence 34675 99999753
No 50
>1m0j_A Metallothionein MT_NC; cadmium thiolate-cluster, metal binding protein; NMR {Notothenia coriiceps} SCOP: g.46.1.1
Probab=27.98 E-value=25 Score=16.71 Aligned_cols=11 Identities=45% Similarity=1.020 Sum_probs=8.4
Q ss_pred CCCCCCCCCCC
Q psy9411 105 VTTCGCGSSFS 115 (118)
Q Consensus 105 ~~~CgCG~sf~ 115 (118)
.++|.|+.|..
T Consensus 8 ~gsC~C~~sCk 18 (28)
T 1m0j_A 8 SGTCNCGGSCT 18 (28)
T ss_dssp HSSCCCSSSCC
T ss_pred CCcccCCCccc
Confidence 36888998875
No 51
>1e5p_A Aphrodisin; lipocalin, pheromone, hamster,; HET: MSE; 1.63A {Mesocricetus auratus} SCOP: b.60.1.1
Probab=27.96 E-value=53 Score=20.57 Aligned_cols=35 Identities=11% Similarity=0.077 Sum_probs=25.3
Q ss_pred eeeCHHHHHHHHHHHHhcCCCCccEEEEEeCCCCC
Q psy9411 11 ITLTEVAIKKVSHLIKKKGNLNLKLRVFIQGGGCS 45 (118)
Q Consensus 11 I~IT~~A~~~l~~~~~~~~~~~~~lRi~v~~~GC~ 45 (118)
-++++++.+++++.+...+-+...|.......-|.
T Consensus 116 ~~l~~e~~~~f~~~~~~~G~~~~~ii~~~~~~~C~ 150 (151)
T 1e5p_A 116 NALTPEENEILVQFAHEKKIPVENILNILATDTCP 150 (151)
T ss_dssp SCCCHHHHHHHHHHHHHTTCCGGGEEECGGGCCSC
T ss_pred CCCCHHHHHHHHHHHHHcCCCHHHEEECCcCCcCC
Confidence 36799999999999999887545565544444463
No 52
>3g5o_B Uncharacterized protein RV2866; heterotetramer, 1:1 ratio, structural genomics, PSI-2, prote structure initiative; 2.00A {Mycobacterium tuberculosis}
Probab=27.93 E-value=16 Score=22.15 Aligned_cols=18 Identities=11% Similarity=0.169 Sum_probs=12.8
Q ss_pred CCCcceeeCHHHHHHHHH
Q psy9411 6 KNNISITLTEVAIKKVSH 23 (118)
Q Consensus 6 ~~~~~I~IT~~A~~~l~~ 23 (118)
.+...|.+|++|.+.|++
T Consensus 15 ~~~y~I~~t~~A~kdlkk 32 (102)
T 3g5o_B 15 MVPYTVRFTTTARRDLHK 32 (102)
T ss_dssp -CCCEEEEEHHHHHHHTT
T ss_pred CccEEEEECHHHHHHHHh
Confidence 355778888888877654
No 53
>2hq2_A Putative heme/hemoglobin transport protein; heme oxygenase, structural repeat; HET: HEM; 1.45A {Escherichia coli} SCOP: e.62.1.1 PDB: 1u9t_A
Probab=27.63 E-value=44 Score=25.32 Aligned_cols=35 Identities=17% Similarity=0.461 Sum_probs=28.6
Q ss_pred cceeeCHHHHHHHHHHHHhcCCCCccEEEEEeCCCCCC
Q psy9411 9 ISITLTEVAIKKVSHLIKKKGNLNLKLRVFIQGGGCSG 46 (118)
Q Consensus 9 ~~I~IT~~A~~~l~~~~~~~~~~~~~lRi~v~~~GC~G 46 (118)
---.|.+.|...+.+.+.+.+ ..|-+||.+.||-.
T Consensus 229 ~A~~v~~~al~~lL~~aa~~~---~pIM~FVgN~GciQ 263 (354)
T 2hq2_A 229 LACKVSNSALAQILESAQQDG---NEIMVFVGNRGCVQ 263 (354)
T ss_dssp TEEEECTTHHHHHHHHHHHHC---CCEEEEEECSSEEE
T ss_pred ceEEeCHHHHHHHHHHHHhcC---CcEEEEecCCceEE
Confidence 344678889999999988876 57999999999964
No 54
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.23 E-value=21 Score=17.24 Aligned_cols=12 Identities=33% Similarity=0.944 Sum_probs=9.1
Q ss_pred CCCCC-CCCCCCc
Q psy9411 105 VTTCG-CGSSFST 116 (118)
Q Consensus 105 ~~~Cg-CG~sf~~ 116 (118)
.-.|. ||.+|..
T Consensus 12 ~~~C~~C~k~F~~ 24 (46)
T 2yti_A 12 PYKCNECGKVFTQ 24 (46)
T ss_dssp TTCCSSSCCCCSS
T ss_pred CeECCCCCcccCC
Confidence 35786 9999974
No 55
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.21 E-value=22 Score=17.07 Aligned_cols=12 Identities=42% Similarity=0.938 Sum_probs=9.1
Q ss_pred CCCCC-CCCCCCc
Q psy9411 105 VTTCG-CGSSFST 116 (118)
Q Consensus 105 ~~~Cg-CG~sf~~ 116 (118)
.-.|. ||.+|..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2ep1_A 12 PYECSDCGKSFIK 24 (46)
T ss_dssp SSCCSSSCCCCSS
T ss_pred CcCCCCCCchhCC
Confidence 35786 9999974
No 56
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=26.84 E-value=14 Score=17.47 Aligned_cols=11 Identities=55% Similarity=1.325 Sum_probs=8.2
Q ss_pred CCCC-CCCCCCc
Q psy9411 106 TTCG-CGSSFST 116 (118)
Q Consensus 106 ~~Cg-CG~sf~~ 116 (118)
-.|. ||.+|..
T Consensus 12 ~~C~~C~k~f~~ 23 (42)
T 2epc_A 12 YLCGQCGKSFTQ 23 (42)
T ss_dssp EECSSSCCEESS
T ss_pred eECCCCCcccCC
Confidence 4675 9999874
No 57
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=26.83 E-value=13 Score=17.10 Aligned_cols=11 Identities=36% Similarity=1.029 Sum_probs=8.6
Q ss_pred CCCC---CCCCCCc
Q psy9411 106 TTCG---CGSSFST 116 (118)
Q Consensus 106 ~~Cg---CG~sf~~ 116 (118)
-.|. ||.+|..
T Consensus 7 ~~C~~~~C~k~f~~ 20 (38)
T 1bhi_A 7 FLCTAPGCGQRFTN 20 (38)
T ss_dssp EECCCTTTCCEESS
T ss_pred eECCCCCCCcccCC
Confidence 4687 9999974
No 58
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.61 E-value=16 Score=16.55 Aligned_cols=11 Identities=36% Similarity=0.815 Sum_probs=7.9
Q ss_pred CCCC-CCCCCCc
Q psy9411 106 TTCG-CGSSFST 116 (118)
Q Consensus 106 ~~Cg-CG~sf~~ 116 (118)
..|. ||.+|..
T Consensus 10 ~~C~~C~k~f~~ 21 (36)
T 2els_A 10 FTCEYCNKVFKF 21 (36)
T ss_dssp EECTTTCCEESS
T ss_pred EECCCCCceeCC
Confidence 3575 9999864
No 59
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.37 E-value=20 Score=17.15 Aligned_cols=12 Identities=33% Similarity=0.966 Sum_probs=9.0
Q ss_pred CCCCC-CCCCCCc
Q psy9411 105 VTTCG-CGSSFST 116 (118)
Q Consensus 105 ~~~Cg-CG~sf~~ 116 (118)
.-.|. ||.+|..
T Consensus 12 ~~~C~~C~k~f~~ 24 (44)
T 2eou_A 12 TSECQECGKIFRH 24 (44)
T ss_dssp CCCCTTTCCCCSS
T ss_pred CeECCCCCcccCC
Confidence 35785 9999974
No 60
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.29 E-value=17 Score=16.47 Aligned_cols=11 Identities=27% Similarity=0.800 Sum_probs=8.0
Q ss_pred CCCC-CCCCCCc
Q psy9411 106 TTCG-CGSSFST 116 (118)
Q Consensus 106 ~~Cg-CG~sf~~ 116 (118)
..|. ||.+|..
T Consensus 10 ~~C~~C~k~f~~ 21 (36)
T 2elv_A 10 YDCHICERKFKN 21 (36)
T ss_dssp EECSSSCCEESS
T ss_pred eECCCCCCccCC
Confidence 4675 9999874
No 61
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=26.17 E-value=14 Score=17.11 Aligned_cols=11 Identities=27% Similarity=0.969 Sum_probs=8.5
Q ss_pred CCCC---CCCCCCc
Q psy9411 106 TTCG---CGSSFST 116 (118)
Q Consensus 106 ~~Cg---CG~sf~~ 116 (118)
..|. ||.+|..
T Consensus 9 ~~C~~~~C~k~f~~ 22 (37)
T 1va1_A 9 HICHIQGCGKVYGK 22 (37)
T ss_dssp EECCSTTCCCEESC
T ss_pred CCCCCCCCCCccCC
Confidence 4685 9999974
No 62
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.12 E-value=22 Score=17.17 Aligned_cols=12 Identities=33% Similarity=0.971 Sum_probs=9.0
Q ss_pred CCCCC-CCCCCCc
Q psy9411 105 VTTCG-CGSSFST 116 (118)
Q Consensus 105 ~~~Cg-CG~sf~~ 116 (118)
.-.|. ||.+|..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2eq1_A 12 PYKCNECGKAFRA 24 (46)
T ss_dssp CCCCTTTTCCCSS
T ss_pred CeECCcCChhhCC
Confidence 35786 9999974
No 63
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.07 E-value=24 Score=16.98 Aligned_cols=12 Identities=42% Similarity=1.018 Sum_probs=9.0
Q ss_pred CCCCC-CCCCCCc
Q psy9411 105 VTTCG-CGSSFST 116 (118)
Q Consensus 105 ~~~Cg-CG~sf~~ 116 (118)
.-.|. ||.+|..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2eq2_A 12 PYQCNECGKAFSQ 24 (46)
T ss_dssp SSSCCSSCCCCSS
T ss_pred CeECCCCCcccCC
Confidence 35785 9999974
No 64
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=26.03 E-value=16 Score=16.96 Aligned_cols=11 Identities=36% Similarity=0.945 Sum_probs=7.9
Q ss_pred CCCC-CCCCCCc
Q psy9411 106 TTCG-CGSSFST 116 (118)
Q Consensus 106 ~~Cg-CG~sf~~ 116 (118)
-.|. ||.+|..
T Consensus 7 ~~C~~C~k~f~~ 18 (39)
T 1njq_A 7 YTCSFCKREFRS 18 (39)
T ss_dssp EECTTTCCEESS
T ss_pred eECCCCCcccCC
Confidence 3575 9999864
No 65
>2l0z_A Glycoprotein G2; zinc-binding domain, virus envelope glycoprotein, GPC, junin arenavirus, viral protein; NMR {Junin virus}
Probab=25.72 E-value=27 Score=18.11 Aligned_cols=9 Identities=33% Similarity=1.088 Sum_probs=6.7
Q ss_pred CCCCCCCCC
Q psy9411 104 AVTTCGCGS 112 (118)
Q Consensus 104 ~~~~CgCG~ 112 (118)
..+.|.||.
T Consensus 20 ~~~~C~CG~ 28 (42)
T 2l0z_A 20 SLGGCRCGK 28 (42)
T ss_dssp TTSSBTTTT
T ss_pred CCceecccc
Confidence 357899984
No 66
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=25.69 E-value=14 Score=18.48 Aligned_cols=11 Identities=27% Similarity=1.029 Sum_probs=8.1
Q ss_pred CCCC-CCCCCCc
Q psy9411 106 TTCG-CGSSFST 116 (118)
Q Consensus 106 ~~Cg-CG~sf~~ 116 (118)
..|. ||.+|..
T Consensus 8 ~~C~~C~k~F~~ 19 (48)
T 3iuf_A 8 YACDICGKRYKN 19 (48)
T ss_dssp EECTTTCCEESS
T ss_pred EECCCcCcccCC
Confidence 3575 9999974
No 67
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.67 E-value=28 Score=16.39 Aligned_cols=12 Identities=33% Similarity=0.994 Sum_probs=8.9
Q ss_pred CCCCC-CCCCCCc
Q psy9411 105 VTTCG-CGSSFST 116 (118)
Q Consensus 105 ~~~Cg-CG~sf~~ 116 (118)
.-.|. ||.+|..
T Consensus 12 ~~~C~~C~k~f~~ 24 (44)
T 2en7_A 12 PYVCNECGKAFRS 24 (44)
T ss_dssp SSCCTTTCCCCSS
T ss_pred CeECCCCCCccCC
Confidence 35685 9999974
No 68
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.60 E-value=23 Score=17.08 Aligned_cols=12 Identities=25% Similarity=0.664 Sum_probs=8.9
Q ss_pred CCCCC-CCCCCCc
Q psy9411 105 VTTCG-CGSSFST 116 (118)
Q Consensus 105 ~~~Cg-CG~sf~~ 116 (118)
.-.|. ||.+|..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2eoh_A 12 PYECKECRKTFIQ 24 (46)
T ss_dssp SCCCSSSCCCCSS
T ss_pred CcCCCCcCchhCC
Confidence 34685 9999974
No 69
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=25.48 E-value=53 Score=19.71 Aligned_cols=28 Identities=25% Similarity=0.510 Sum_probs=22.0
Q ss_pred eCHHHHHHHHHHHHhcCCCCccEEEEEeC----CCCC
Q psy9411 13 LTEVAIKKVSHLIKKKGNLNLKLRVFIQG----GGCS 45 (118)
Q Consensus 13 IT~~A~~~l~~~~~~~~~~~~~lRi~v~~----~GC~ 45 (118)
+++.+.+++++++... .|.||.++ .+|+
T Consensus 3 ~s~~~~~~v~~~i~~~-----~Vvvy~k~t~~~p~Cp 34 (109)
T 3ipz_A 3 LTPQLKDTLEKLVNSE-----KVVLFMKGTRDFPMCG 34 (109)
T ss_dssp CCHHHHHHHHHHHTSS-----SEEEEESBCSSSBSSH
T ss_pred CCHHHHHHHHHHHccC-----CEEEEEecCCCCCCCh
Confidence 6889999999998664 47888876 3786
No 70
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.32 E-value=24 Score=17.01 Aligned_cols=12 Identities=33% Similarity=0.769 Sum_probs=9.0
Q ss_pred CCCCC-CCCCCCc
Q psy9411 105 VTTCG-CGSSFST 116 (118)
Q Consensus 105 ~~~Cg-CG~sf~~ 116 (118)
.-.|. ||.+|..
T Consensus 12 ~~~C~~C~k~F~~ 24 (47)
T 2epx_A 12 PYECIECGKAFIQ 24 (47)
T ss_dssp SBCCSSSCCCBSS
T ss_pred CEECCccCchhCC
Confidence 35786 9999974
No 71
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.07 E-value=38 Score=15.70 Aligned_cols=11 Identities=36% Similarity=0.996 Sum_probs=8.5
Q ss_pred CCCC-CCCCCCc
Q psy9411 106 TTCG-CGSSFST 116 (118)
Q Consensus 106 ~~Cg-CG~sf~~ 116 (118)
-.|. ||.+|..
T Consensus 11 ~~C~~C~k~f~~ 22 (42)
T 2yte_A 11 YSCAECKETFSD 22 (42)
T ss_dssp CBCTTTCCBCSS
T ss_pred eECCCCCCccCC
Confidence 4785 9999974
No 72
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.06 E-value=28 Score=16.83 Aligned_cols=12 Identities=33% Similarity=0.789 Sum_probs=9.1
Q ss_pred CCCCC-CCCCCCc
Q psy9411 105 VTTCG-CGSSFST 116 (118)
Q Consensus 105 ~~~Cg-CG~sf~~ 116 (118)
...|. ||.+|..
T Consensus 12 ~~~C~~C~k~F~~ 24 (46)
T 2eom_A 12 GHRCSDCGKFFLQ 24 (46)
T ss_dssp SCCCSSSCCCCSS
T ss_pred CcCCCCCCCeeCC
Confidence 35786 9999974
No 73
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=24.94 E-value=30 Score=17.51 Aligned_cols=11 Identities=27% Similarity=0.259 Sum_probs=7.8
Q ss_pred CCCC-CCCCCCc
Q psy9411 106 TTCG-CGSSFST 116 (118)
Q Consensus 106 ~~Cg-CG~sf~~ 116 (118)
-.|. ||.+|+.
T Consensus 42 ~~C~~C~k~F~~ 53 (54)
T 2eps_A 42 HKCQVWVSGPSS 53 (54)
T ss_dssp CCSSSSCCSSCC
T ss_pred ccCCCCCCCCCC
Confidence 4675 8888864
No 74
>3s26_A Neutrophil gelatinase-associated lipocalin; beta-barrel, siderophore binding protein, N-linked glycosyla secreted, transport protein; HET: NAG BMA MAN; 1.80A {Mus musculus} SCOP: b.60.1.1 PDB: 2k23_A
Probab=24.84 E-value=1.1e+02 Score=20.13 Aligned_cols=34 Identities=12% Similarity=0.169 Sum_probs=27.3
Q ss_pred eeCHHHHHHHHHHHHhcCCCCccEEEEEeCCCCC
Q psy9411 12 TLTEVAIKKVSHLIKKKGNLNLKLRVFIQGGGCS 45 (118)
Q Consensus 12 ~IT~~A~~~l~~~~~~~~~~~~~lRi~v~~~GC~ 45 (118)
++++++.+++++.+...+-+...|...-..+-|.
T Consensus 145 ~l~~e~~~~f~~~~~~~G~~~~~ii~~~q~~~C~ 178 (190)
T 3s26_A 145 ELSPELKERFTRFAKSLGLKDDNIIFSVPTDQCI 178 (190)
T ss_dssp CCCHHHHHHHHHHHHHTTCCGGGEEEEECCSSST
T ss_pred CCCHHHHHHHHHHHHHcCCCHHHEEECCCCCccc
Confidence 5899999999999999887655677666666785
No 75
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.82 E-value=29 Score=16.70 Aligned_cols=13 Identities=31% Similarity=0.672 Sum_probs=9.3
Q ss_pred CCCCC-CCCCCCcC
Q psy9411 105 VTTCG-CGSSFSTY 117 (118)
Q Consensus 105 ~~~Cg-CG~sf~~~ 117 (118)
.-.|. ||.+|..+
T Consensus 12 ~~~C~~C~k~F~~~ 25 (46)
T 2enh_A 12 PYECDVCRKAFSHH 25 (46)
T ss_dssp SCBCTTTCCBCSSS
T ss_pred CcCCCCcCchhCCH
Confidence 35685 99999743
No 76
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=24.72 E-value=29 Score=18.62 Aligned_cols=11 Identities=36% Similarity=1.017 Sum_probs=7.9
Q ss_pred CCCC-CCCCCCc
Q psy9411 106 TTCG-CGSSFST 116 (118)
Q Consensus 106 ~~Cg-CG~sf~~ 116 (118)
..|+ ||..|+-
T Consensus 4 Y~C~rCg~~fs~ 15 (48)
T 4ayb_P 4 YRCGKCWKTFTD 15 (48)
T ss_dssp -CCCCTTTTCCC
T ss_pred EEeeccCCCccH
Confidence 4686 9999873
No 77
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=24.70 E-value=20 Score=17.71 Aligned_cols=13 Identities=31% Similarity=0.843 Sum_probs=9.5
Q ss_pred CCCC---CCCCCCCcC
Q psy9411 105 VTTC---GCGSSFSTY 117 (118)
Q Consensus 105 ~~~C---gCG~sf~~~ 117 (118)
.-.| .||.+|..+
T Consensus 18 ~~~C~~~~C~k~F~~~ 33 (47)
T 1ncs_A 18 TFECLFPGCTKTFKRR 33 (47)
T ss_dssp EEECCCTTCCCEECSS
T ss_pred CeECCCCCCCCccCCH
Confidence 3478 599999753
No 78
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.68 E-value=20 Score=17.10 Aligned_cols=11 Identities=27% Similarity=0.869 Sum_probs=8.2
Q ss_pred CCCC-CCCCCCc
Q psy9411 106 TTCG-CGSSFST 116 (118)
Q Consensus 106 ~~Cg-CG~sf~~ 116 (118)
-.|. ||.+|..
T Consensus 13 ~~C~~C~k~f~~ 24 (44)
T 2yu5_A 13 FKCSKCDRVFTQ 24 (44)
T ss_dssp EECSSSSCEESS
T ss_pred eECCCCCchhCC
Confidence 4675 9999874
No 79
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.58 E-value=22 Score=17.21 Aligned_cols=12 Identities=33% Similarity=0.863 Sum_probs=9.0
Q ss_pred CCCCC-CCCCCCc
Q psy9411 105 VTTCG-CGSSFST 116 (118)
Q Consensus 105 ~~~Cg-CG~sf~~ 116 (118)
.-.|. ||.+|..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2ytm_A 12 PYKCMECGKAFGD 24 (46)
T ss_dssp SSSBTTTTBCCSS
T ss_pred CcCCCCCCchhCC
Confidence 35786 9999974
No 80
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.47 E-value=21 Score=17.21 Aligned_cols=12 Identities=33% Similarity=0.908 Sum_probs=9.0
Q ss_pred CCCCC-CCCCCCc
Q psy9411 105 VTTCG-CGSSFST 116 (118)
Q Consensus 105 ~~~Cg-CG~sf~~ 116 (118)
.-.|. ||.+|..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2emg_A 12 PFICSECGKVFTH 24 (46)
T ss_dssp SCBCTTTCCBCSS
T ss_pred CEECCccCcccCC
Confidence 35785 9999974
No 81
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.43 E-value=19 Score=17.42 Aligned_cols=12 Identities=42% Similarity=0.874 Sum_probs=8.9
Q ss_pred CCCCC-CCCCCCc
Q psy9411 105 VTTCG-CGSSFST 116 (118)
Q Consensus 105 ~~~Cg-CG~sf~~ 116 (118)
+-.|. ||.+|..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2epz_A 12 PFDCIDCGKAFSD 24 (46)
T ss_dssp SBCCTTTCCCBSS
T ss_pred CeECCCCCceeCC
Confidence 35775 9999974
No 82
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.40 E-value=26 Score=16.77 Aligned_cols=12 Identities=42% Similarity=1.021 Sum_probs=9.0
Q ss_pred CCCCC-CCCCCCc
Q psy9411 105 VTTCG-CGSSFST 116 (118)
Q Consensus 105 ~~~Cg-CG~sf~~ 116 (118)
.-.|. ||.+|..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2ytr_A 12 PYKCNECGKAFSQ 24 (46)
T ss_dssp TTCCTTTCCCCSS
T ss_pred CcCCCCCCCccCC
Confidence 35786 9999974
No 83
>1lcs_A Feline leukemia virus receptor-binding domain; antiparallel beta-sandwich glycoprotein, viral protein; HET: NAG MAN BMA NDG TOE; 2.50A {Feline leukemia virus} SCOP: b.20.1.1
Probab=24.38 E-value=22 Score=25.05 Aligned_cols=41 Identities=10% Similarity=0.055 Sum_probs=27.1
Q ss_pred CcceeeCHHHHHHHHHHHHhcCCCCccEEEEEeCCCCCCeEEEEEEc
Q psy9411 8 NISITLTEVAIKKVSHLIKKKGNLNLKLRVFIQGGGCSGFQYGFMFD 54 (118)
Q Consensus 8 ~~~I~IT~~A~~~l~~~~~~~~~~~~~lRi~v~~~GC~G~~~~l~~~ 54 (118)
+..|++|++.++. +-. .+. --+|||++ .+.-.|..|.+.+.
T Consensus 162 PLkI~FT~~GK~~--~W~--~G~-~WGlRlY~-~G~dpG~~ftIrl~ 202 (211)
T 1lcs_A 162 PLILQFTQKGRQT--SWD--GPK-SWGLRLYR-SGYDPIALFSVSRQ 202 (211)
T ss_dssp EEEEEECHHHHHS--CCS--SCE-EEEEEECC-SSCCCEEEEEEEEE
T ss_pred cEEEEecccchhc--cCc--CCc-EEEEEEec-cCCCceeEEEEEEE
Confidence 4789999998875 221 111 36899996 33346777877663
No 84
>1xn7_A Hypothetical protein YHGG; alpha+beta, GFT structural genomics, protein structure initiative, PSI, NESG; NMR {Escherichia coli} SCOP: a.4.5.62
Probab=24.34 E-value=60 Score=18.77 Aligned_cols=33 Identities=15% Similarity=0.343 Sum_probs=23.4
Q ss_pred cceeeCHHHHHHHHHHHHhcCCCCccEEEEEeCCCC
Q psy9411 9 ISITLTEVAIKKVSHLIKKKGNLNLKLRVFIQGGGC 44 (118)
Q Consensus 9 ~~I~IT~~A~~~l~~~~~~~~~~~~~lRi~v~~~GC 44 (118)
-.+.+|+.++.+..+.|.+++ .-.|+...+++|
T Consensus 24 ~~l~VS~~TIRrdL~~Le~~G---~l~R~~~~GgaC 56 (78)
T 1xn7_A 24 QTLNTPQPMINAMLQQLESMG---KAVRIQEEPDGC 56 (78)
T ss_dssp HHTTCCHHHHHHHHHHHHHHT---SEEEECCCCCCC
T ss_pred HHHCcCHHHHHHHHHHHHHCC---CEEEecCcCCCC
Confidence 456789999999888888875 456763235555
No 85
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.30 E-value=21 Score=17.25 Aligned_cols=11 Identities=36% Similarity=0.933 Sum_probs=8.3
Q ss_pred CCCC-CCCCCCc
Q psy9411 106 TTCG-CGSSFST 116 (118)
Q Consensus 106 ~~Cg-CG~sf~~ 116 (118)
-.|. ||.+|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2eoy_A 13 FKCNKCEKTFSC 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred EECcCCCCcCCC
Confidence 4675 9999974
No 86
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=23.79 E-value=17 Score=17.16 Aligned_cols=11 Identities=36% Similarity=1.117 Sum_probs=8.0
Q ss_pred CCCC-CCCCCCc
Q psy9411 106 TTCG-CGSSFST 116 (118)
Q Consensus 106 ~~Cg-CG~sf~~ 116 (118)
-.|. ||.+|..
T Consensus 11 ~~C~~C~k~f~~ 22 (42)
T 2el5_A 11 YECSECGKAFNR 22 (42)
T ss_dssp EECSSSCCEESS
T ss_pred ccCCCcChhhCC
Confidence 3575 9999874
No 87
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.66 E-value=26 Score=16.90 Aligned_cols=11 Identities=36% Similarity=1.059 Sum_probs=8.5
Q ss_pred CCCC-CCCCCCc
Q psy9411 106 TTCG-CGSSFST 116 (118)
Q Consensus 106 ~~Cg-CG~sf~~ 116 (118)
-.|. ||.+|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2yth_A 13 FQCEECGKRFTQ 24 (46)
T ss_dssp BCCSSSCCCBSS
T ss_pred CCCCCCCcccCC
Confidence 4675 9999974
No 88
>1xhj_A Nitrogen fixation protein NIFU; alpha-beta, NIFU-like, structural genomics, protein structur initiative, NESG, PSI; NMR {Staphylococcus epidermidis} SCOP: d.52.8.1
Probab=23.63 E-value=1.2e+02 Score=18.01 Aligned_cols=15 Identities=13% Similarity=0.426 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHHhcC
Q psy9411 15 EVAIKKVSHLIKKKG 29 (118)
Q Consensus 15 ~~A~~~l~~~~~~~~ 29 (118)
+++.+.++-.+...+
T Consensus 13 ~~~L~~IRP~L~~dG 27 (88)
T 1xhj_A 13 AEVIERLRPFLLRDG 27 (88)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHhcHHHHhcC
Confidence 456666777776655
No 89
>1aol_A GP70, SU; coat protein, viral glycoprotein, retrovirus, viral protein; HET: NAG; 2.00A {Friend murine leukemia virus} SCOP: b.20.1.1
Probab=23.54 E-value=32 Score=24.48 Aligned_cols=42 Identities=19% Similarity=0.454 Sum_probs=27.4
Q ss_pred CcceeeCHHHHHHHHHHHHhcCCCCccEEEEEeCCCCCCeEEEEEEc
Q psy9411 8 NISITLTEVAIKKVSHLIKKKGNLNLKLRVFIQGGGCSGFQYGFMFD 54 (118)
Q Consensus 8 ~~~I~IT~~A~~~l~~~~~~~~~~~~~lRi~v~~~GC~G~~~~l~~~ 54 (118)
+..|++|++.++.. +-. .+. --+|||++ .+.-.|..|.+.+.
T Consensus 178 PLkI~FTd~GK~~~-~W~--~G~-~WGLRlY~-~G~dpG~~ftIrlk 219 (228)
T 1aol_A 178 PLAIQFTNAGKQVT-SWT--TGH-YWGLRLYV-SGRDPGLTFGIRLR 219 (228)
T ss_dssp BEEEEECHHHHHCC-GGG--TCE-EEEEEECC-TTTCCEEEEEEEEE
T ss_pred cEEEEecccccccc-ccc--CCc-EeEEEEEe-cCCCceEEEEEEEE
Confidence 47899999988742 221 122 36899996 34346888887664
No 90
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.45 E-value=31 Score=16.54 Aligned_cols=12 Identities=33% Similarity=0.944 Sum_probs=9.0
Q ss_pred CCCCC-CCCCCCc
Q psy9411 105 VTTCG-CGSSFST 116 (118)
Q Consensus 105 ~~~Cg-CG~sf~~ 116 (118)
.-.|. ||.+|..
T Consensus 12 ~~~C~~C~k~F~~ 24 (46)
T 2enf_A 12 PYKCNECGKVFTQ 24 (46)
T ss_dssp SCBCSSSCCBCSS
T ss_pred CeECCCCCcccCC
Confidence 35785 9999974
No 91
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.79 E-value=21 Score=16.11 Aligned_cols=11 Identities=18% Similarity=0.570 Sum_probs=7.8
Q ss_pred CCCC-CCCCCCc
Q psy9411 106 TTCG-CGSSFST 116 (118)
Q Consensus 106 ~~Cg-CG~sf~~ 116 (118)
-.|. ||.+|..
T Consensus 10 ~~C~~C~k~f~~ 21 (36)
T 2elq_A 10 FKCSLCEYATRS 21 (36)
T ss_dssp EECSSSSCEESC
T ss_pred ccCCCCCchhCC
Confidence 3574 9998864
No 92
>3tbm_A Putative uncharacterized protein; iron-sulfur, CDGSH, metal binding protein; HET: 2PE TLA; 1.80A {Ralstonia solanacearum}
Probab=22.73 E-value=27 Score=20.19 Aligned_cols=10 Identities=40% Similarity=0.956 Sum_probs=8.1
Q ss_pred CCCCCCCCCC
Q psy9411 106 TTCGCGSSFS 115 (118)
Q Consensus 106 ~~CgCG~sf~ 115 (118)
.-|.||.|=+
T Consensus 42 ~lC~Cg~S~n 51 (69)
T 3tbm_A 42 WLCRCGHSLN 51 (69)
T ss_dssp EECCSSCCSS
T ss_pred EEeeCCCCCC
Confidence 5899999865
No 93
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.61 E-value=24 Score=17.02 Aligned_cols=12 Identities=25% Similarity=0.891 Sum_probs=9.0
Q ss_pred CCCCC-CCCCCCc
Q psy9411 105 VTTCG-CGSSFST 116 (118)
Q Consensus 105 ~~~Cg-CG~sf~~ 116 (118)
.-.|. ||.+|..
T Consensus 12 ~~~C~~C~k~F~~ 24 (46)
T 2en9_A 12 LFKCNECKKTFTQ 24 (46)
T ss_dssp CCBCTTTCCBCSS
T ss_pred CEECCccCcccCC
Confidence 35786 9999974
No 94
>3nrl_A Uncharacterized protein rumgna_01417; beta protein, structural genomics, PSI-2, protein structure initiative; 1.90A {Ruminococcus gnavus}
Probab=22.51 E-value=39 Score=20.13 Aligned_cols=32 Identities=13% Similarity=0.219 Sum_probs=20.8
Q ss_pred EEEEEeCCCCceEEEecCCCCCCCCCCCCCCc
Q psy9411 85 EIDYKDDLDGSKFVIKNPNAVTTCGCGSSFST 116 (118)
Q Consensus 85 ~IDy~~~~~~~gF~i~~p~~~~~CgCG~sf~~ 116 (118)
+|=|.++...-++.+..-...++=.||..|.+
T Consensus 8 ~L~Yn~~~dRydi~~~~~~~ygGlHCGE~feV 39 (81)
T 3nrl_A 8 TLFYDTETGRYDIRFDLESFYGGLHCGECFDV 39 (81)
T ss_dssp EEEEETTTTEEEEEEETTEECCCCCTTCEEEE
T ss_pred EEEEcCCCCeEEEEeccccccCCcccccEEEE
Confidence 56677666555555554444557779988875
No 95
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.45 E-value=29 Score=16.65 Aligned_cols=12 Identities=42% Similarity=0.946 Sum_probs=8.9
Q ss_pred CCCCC-CCCCCCc
Q psy9411 105 VTTCG-CGSSFST 116 (118)
Q Consensus 105 ~~~Cg-CG~sf~~ 116 (118)
.-.|. ||.+|..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2eoq_A 12 PFKCDICGKSFCG 24 (46)
T ss_dssp SCCCSSSCCCCSS
T ss_pred CcCCCcCCchhCC
Confidence 34675 9999974
No 96
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.30 E-value=29 Score=16.52 Aligned_cols=11 Identities=36% Similarity=0.851 Sum_probs=8.5
Q ss_pred CCCC-CCCCCCc
Q psy9411 106 TTCG-CGSSFST 116 (118)
Q Consensus 106 ~~Cg-CG~sf~~ 116 (118)
-.|. ||.+|..
T Consensus 11 ~~C~~C~k~f~~ 22 (43)
T 2yrm_A 11 FFCNECDCRFSE 22 (43)
T ss_dssp BCCSSSCCCBSS
T ss_pred EECCCCCCeeCC
Confidence 4675 9999974
No 97
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.30 E-value=34 Score=16.39 Aligned_cols=12 Identities=42% Similarity=1.038 Sum_probs=8.9
Q ss_pred CCCCC-CCCCCCc
Q psy9411 105 VTTCG-CGSSFST 116 (118)
Q Consensus 105 ~~~Cg-CG~sf~~ 116 (118)
.-.|. ||.+|..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2em6_A 12 CYKCDVCGKEFSQ 24 (46)
T ss_dssp CCBCSSSCCBCSS
T ss_pred CeECCCCCcccCC
Confidence 35785 9999974
No 98
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.28 E-value=25 Score=16.94 Aligned_cols=11 Identities=45% Similarity=0.954 Sum_probs=8.1
Q ss_pred CCCC-CCCCCCc
Q psy9411 106 TTCG-CGSSFST 116 (118)
Q Consensus 106 ~~Cg-CG~sf~~ 116 (118)
-.|. ||.+|..
T Consensus 13 ~~C~~C~k~F~~ 24 (46)
T 2en3_A 13 FQCKECGMNFSW 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred eeCcccChhhCC
Confidence 4675 9999874
No 99
>2ba3_A NIKA; dimer, bacterial conjugation, relaxase, DNA binding, ribbon- helix-helix, DNA binding protein; NMR {Plasmid R64}
Probab=22.27 E-value=90 Score=16.02 Aligned_cols=24 Identities=8% Similarity=0.102 Sum_probs=20.2
Q ss_pred CCcceeeCHHHHHHHHHHHHhcCC
Q psy9411 7 NNISITLTEVAIKKVSHLIKKKGN 30 (118)
Q Consensus 7 ~~~~I~IT~~A~~~l~~~~~~~~~ 30 (118)
....|.+||.-.+.|.+.+...+.
T Consensus 16 ~~i~vRlt~eE~~~l~~~A~~~g~ 39 (51)
T 2ba3_A 16 VVRTLRFSPVEDETIRKKAEDSGL 39 (51)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHTC
T ss_pred eeEEEEECHHHHHHHHHHHHHhCC
Confidence 347899999999999999987753
No 100
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.82 E-value=20 Score=17.36 Aligned_cols=12 Identities=33% Similarity=0.916 Sum_probs=9.0
Q ss_pred CCCCC-CCCCCCc
Q psy9411 105 VTTCG-CGSSFST 116 (118)
Q Consensus 105 ~~~Cg-CG~sf~~ 116 (118)
.-.|. ||.+|..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2eon_A 12 PYKCQVCGKAFRV 24 (46)
T ss_dssp SCBCSSSCCBCSS
T ss_pred ccCCCCCCcccCc
Confidence 35786 9999974
No 101
>2cpg_A REPA protein, transcriptional repressor COPG; DNA-binding protein, plasmid, gene regulation; 1.60A {Streptococcus agalactiae} SCOP: a.43.1.3 PDB: 1b01_A* 1ea4_A*
Probab=21.81 E-value=47 Score=16.42 Aligned_cols=24 Identities=21% Similarity=0.495 Sum_probs=19.9
Q ss_pred CCcceeeCHHHHHHHHHHHHhcCC
Q psy9411 7 NNISITLTEVAIKKVSHLIKKKGN 30 (118)
Q Consensus 7 ~~~~I~IT~~A~~~l~~~~~~~~~ 30 (118)
....|+|++.-.++|.++....+.
T Consensus 3 ~ritv~l~~~l~~~Ld~~a~~~g~ 26 (45)
T 2cpg_A 3 KRLTITLSESVLENLEKMAREMGL 26 (45)
T ss_dssp EEEEEEEEHHHHHHHHHHHHHHTC
T ss_pred ceEEEecCHHHHHHHHHHHHHHCc
Confidence 357899999999999999887653
No 102
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.71 E-value=19 Score=17.30 Aligned_cols=11 Identities=45% Similarity=1.313 Sum_probs=8.2
Q ss_pred CCCC-CCCCCCc
Q psy9411 106 TTCG-CGSSFST 116 (118)
Q Consensus 106 ~~Cg-CG~sf~~ 116 (118)
-.|. ||.+|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2yrj_A 13 YRCGECGKAFAQ 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred eECCCCCCccCC
Confidence 4675 9999874
No 103
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.59 E-value=26 Score=16.91 Aligned_cols=12 Identities=25% Similarity=0.875 Sum_probs=8.9
Q ss_pred CCCCC-CCCCCCc
Q psy9411 105 VTTCG-CGSSFST 116 (118)
Q Consensus 105 ~~~Cg-CG~sf~~ 116 (118)
.-.|. ||.+|..
T Consensus 12 ~~~C~~C~k~F~~ 24 (46)
T 2elz_A 12 PYKCEDCGKGYNR 24 (46)
T ss_dssp SCBCSSSCCBCSS
T ss_pred CeeCcccCchhCC
Confidence 35785 9999974
No 104
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.56 E-value=19 Score=16.91 Aligned_cols=11 Identities=36% Similarity=1.026 Sum_probs=8.1
Q ss_pred CCCC-CCCCCCc
Q psy9411 106 TTCG-CGSSFST 116 (118)
Q Consensus 106 ~~Cg-CG~sf~~ 116 (118)
-.|. ||.+|..
T Consensus 12 ~~C~~C~k~f~~ 23 (42)
T 2en2_A 12 YKCETCGARFVQ 23 (42)
T ss_dssp EECTTTCCEESS
T ss_pred EeCCCcChhhCC
Confidence 4675 9999874
No 105
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.56 E-value=19 Score=17.62 Aligned_cols=11 Identities=27% Similarity=0.570 Sum_probs=8.5
Q ss_pred CCCC---CCCCCCc
Q psy9411 106 TTCG---CGSSFST 116 (118)
Q Consensus 106 ~~Cg---CG~sf~~ 116 (118)
-.|. ||.+|..
T Consensus 10 ~~C~~~~C~k~F~~ 23 (38)
T 2eln_A 10 LKCPTDGCDYSTPD 23 (38)
T ss_dssp EECSSSSCCCEESC
T ss_pred CCCCCCCCCCccCC
Confidence 4685 9999974
No 106
>3bpq_B Toxin RELE3; protein toxin-antitoxin complex; 2.20A {Methanocaldococcus jannaschii}
Probab=21.54 E-value=20 Score=20.19 Aligned_cols=10 Identities=10% Similarity=0.338 Sum_probs=4.3
Q ss_pred eeeCHHHHHH
Q psy9411 11 ITLTEVAIKK 20 (118)
Q Consensus 11 I~IT~~A~~~ 20 (118)
|.+|+.|.+.
T Consensus 3 v~~~~~a~~d 12 (88)
T 3bpq_B 3 VLFAKTFVKD 12 (88)
T ss_dssp CEEEHHHHHH
T ss_pred EEEcHHHHHH
Confidence 4444444443
No 107
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.45 E-value=20 Score=17.32 Aligned_cols=11 Identities=36% Similarity=1.041 Sum_probs=8.1
Q ss_pred CCCC-CCCCCCc
Q psy9411 106 TTCG-CGSSFST 116 (118)
Q Consensus 106 ~~Cg-CG~sf~~ 116 (118)
-.|. ||.+|..
T Consensus 13 ~~C~~C~k~F~~ 24 (46)
T 2emi_A 13 YECSECGKAFIQ 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred CCCCCCCcccCC
Confidence 4675 9999874
No 108
>2vo9_A EAD500, L-alanyl-D-glutamate peptidase; cell WALL biogenesis/degradation, secreted, cell WALL, hydro; 1.8A {Bacteriophage A500} SCOP: d.65.1.5
Probab=21.41 E-value=67 Score=21.63 Aligned_cols=26 Identities=23% Similarity=0.299 Sum_probs=18.7
Q ss_pred eeCHHHHHHHHHHHHhcCCCCccEEE
Q psy9411 12 TLTEVAIKKVSHLIKKKGNLNLKLRV 37 (118)
Q Consensus 12 ~IT~~A~~~l~~~~~~~~~~~~~lRi 37 (118)
.+.+.|+++|++++.....++..|+|
T Consensus 32 gl~~~aa~al~~m~~~a~~~Gi~l~i 57 (179)
T 2vo9_A 32 GMYKITSDKTRNVIKKMAKEGIYLCV 57 (179)
T ss_dssp TSCHHHHHHHHHHHHHHHTTTCCEEE
T ss_pred ccCHHHHHHHHHHHHHHHHCCCeEEE
Confidence 37899999999999876544444443
No 109
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.34 E-value=20 Score=17.04 Aligned_cols=11 Identities=36% Similarity=0.969 Sum_probs=8.1
Q ss_pred CCCC-CCCCCCc
Q psy9411 106 TTCG-CGSSFST 116 (118)
Q Consensus 106 ~~Cg-CG~sf~~ 116 (118)
-.|. ||.+|..
T Consensus 13 ~~C~~C~k~f~~ 24 (44)
T 2eof_A 13 YECNECQKAFNT 24 (44)
T ss_dssp EECTTTCCEESC
T ss_pred eECCCCCcccCC
Confidence 4675 9999874
No 110
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.22 E-value=20 Score=17.23 Aligned_cols=11 Identities=45% Similarity=1.059 Sum_probs=8.1
Q ss_pred CCCC-CCCCCCc
Q psy9411 106 TTCG-CGSSFST 116 (118)
Q Consensus 106 ~~Cg-CG~sf~~ 116 (118)
-.|. ||.+|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2yts_A 13 YICNECGKSFIQ 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred EECCCCChhhCC
Confidence 4675 9999874
No 111
>2hgo_A CASSIICOLIN; toxin, disulfide bridge, glycoprotein; HET: PCA 3HD; NMR {Corynespora cassiicola}
Probab=21.16 E-value=14 Score=17.00 Aligned_cols=9 Identities=56% Similarity=1.464 Sum_probs=5.0
Q ss_pred CCCC--CCCCC
Q psy9411 106 TTCG--CGSSF 114 (118)
Q Consensus 106 ~~Cg--CG~sf 114 (118)
+.|| ||.|.
T Consensus 12 gfcgdncgnsw 22 (27)
T 2hgo_A 12 GFCGDNCGNSW 22 (27)
T ss_dssp TEEECSSSCEE
T ss_pred ccccCCcCCcc
Confidence 3454 77664
No 112
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.05 E-value=24 Score=16.89 Aligned_cols=11 Identities=36% Similarity=0.936 Sum_probs=8.2
Q ss_pred CCCC-CCCCCCc
Q psy9411 106 TTCG-CGSSFST 116 (118)
Q Consensus 106 ~~Cg-CG~sf~~ 116 (118)
-.|. ||.+|..
T Consensus 13 ~~C~~C~k~F~~ 24 (44)
T 2epv_A 13 YECNECGKAFIW 24 (44)
T ss_dssp EECSSSCCEESS
T ss_pred eECCCCCcccCc
Confidence 4675 9999874
No 113
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.04 E-value=27 Score=16.72 Aligned_cols=11 Identities=36% Similarity=0.996 Sum_probs=8.2
Q ss_pred CCCC-CCCCCCc
Q psy9411 106 TTCG-CGSSFST 116 (118)
Q Consensus 106 ~~Cg-CG~sf~~ 116 (118)
-.|. ||.+|..
T Consensus 13 ~~C~~C~k~F~~ 24 (46)
T 2epw_A 13 CKCTECGKAFCW 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred eeCCCCCCccCC
Confidence 4675 9999874
No 114
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.87 E-value=27 Score=16.80 Aligned_cols=11 Identities=45% Similarity=1.283 Sum_probs=8.2
Q ss_pred CCCC-CCCCCCc
Q psy9411 106 TTCG-CGSSFST 116 (118)
Q Consensus 106 ~~Cg-CG~sf~~ 116 (118)
-.|. ||.+|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2ytg_A 13 FKCGECGKSYNQ 24 (46)
T ss_dssp EECTTTCCEESS
T ss_pred eECCCCCcccCC
Confidence 4675 9999874
No 115
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.85 E-value=20 Score=17.08 Aligned_cols=11 Identities=27% Similarity=0.896 Sum_probs=8.2
Q ss_pred CCCC-CCCCCCc
Q psy9411 106 TTCG-CGSSFST 116 (118)
Q Consensus 106 ~~Cg-CG~sf~~ 116 (118)
-.|. ||.+|..
T Consensus 13 ~~C~~C~k~f~~ 24 (44)
T 2emb_A 13 YECSKCQATFNL 24 (44)
T ss_dssp EECTTTCCEESC
T ss_pred eECCCCCCccCC
Confidence 4675 9999874
No 116
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.83 E-value=28 Score=16.64 Aligned_cols=12 Identities=42% Similarity=0.936 Sum_probs=8.9
Q ss_pred CCCCC-CCCCCCc
Q psy9411 105 VTTCG-CGSSFST 116 (118)
Q Consensus 105 ~~~Cg-CG~sf~~ 116 (118)
.-.|. ||.+|..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2eov_A 12 PYKCSDCGKSFTW 24 (46)
T ss_dssp SCBCSSSCCBCSS
T ss_pred CccCCccChhhCC
Confidence 35685 9999974
No 117
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.76 E-value=38 Score=16.20 Aligned_cols=12 Identities=33% Similarity=0.938 Sum_probs=9.0
Q ss_pred CCCCC-CCCCCCc
Q psy9411 105 VTTCG-CGSSFST 116 (118)
Q Consensus 105 ~~~Cg-CG~sf~~ 116 (118)
.-.|. ||.+|..
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2emz_A 12 PFKCNECGKGFGR 24 (46)
T ss_dssp SCCCSSSCCCCSS
T ss_pred CeECCCCCcccCC
Confidence 35786 9999974
No 118
>1bj7_A D 2; allergen, lipocalin; 1.80A {Bos taurus} SCOP: b.60.1.1
Probab=20.63 E-value=80 Score=19.85 Aligned_cols=33 Identities=21% Similarity=0.401 Sum_probs=24.2
Q ss_pred eeCHHHHHHHHHHHHhcCCCCccEEEEEeCCCC
Q psy9411 12 TLTEVAIKKVSHLIKKKGNLNLKLRVFIQGGGC 44 (118)
Q Consensus 12 ~IT~~A~~~l~~~~~~~~~~~~~lRi~v~~~GC 44 (118)
++++++.+++++.+...+-+...|.......-|
T Consensus 122 ~l~~e~~~~f~~~~~~~G~~~~~i~~~~~~~~C 154 (156)
T 1bj7_A 122 SFTPEELEKYQQLNSERGVPNENIENLIKTDNC 154 (156)
T ss_dssp CCCHHHHHHHHHHHHHHTCCGGGEEECGGGCCS
T ss_pred CCCHHHHHHHHHHHHHcCCCHHHEEecCCCCCC
Confidence 589999999999999988754556544444445
No 119
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.55 E-value=25 Score=16.40 Aligned_cols=11 Identities=45% Similarity=1.081 Sum_probs=8.0
Q ss_pred CCCC-CCCCCCc
Q psy9411 106 TTCG-CGSSFST 116 (118)
Q Consensus 106 ~~Cg-CG~sf~~ 116 (118)
-.|. ||.+|..
T Consensus 11 ~~C~~C~k~f~~ 22 (41)
T 2ept_A 11 YECQECGKSFRQ 22 (41)
T ss_dssp EECSSSCCEESS
T ss_pred eECCCCCCCcCC
Confidence 3575 9999874
No 120
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.51 E-value=21 Score=17.19 Aligned_cols=11 Identities=27% Similarity=0.909 Sum_probs=8.1
Q ss_pred CCCC-CCCCCCc
Q psy9411 106 TTCG-CGSSFST 116 (118)
Q Consensus 106 ~~Cg-CG~sf~~ 116 (118)
-.|. ||.+|..
T Consensus 13 ~~C~~C~k~F~~ 24 (46)
T 2em3_A 13 YECKVCSKAFTQ 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred eECCCCCcccCC
Confidence 4675 9999874
No 121
>1r44_A D-alanyl-D-alanine dipeptidase; VANX, E.faecium, hydrolase; 2.25A {Enterococcus faecium} SCOP: d.65.1.4
Probab=20.39 E-value=1.6e+02 Score=20.21 Aligned_cols=32 Identities=6% Similarity=-0.108 Sum_probs=23.5
Q ss_pred CCcceeeCHHHHHHHHHHHHhcCCCCccEEEEEe
Q psy9411 7 NNISITLTEVAIKKVSHLIKKKGNLNLKLRVFIQ 40 (118)
Q Consensus 7 ~~~~I~IT~~A~~~l~~~~~~~~~~~~~lRi~v~ 40 (118)
......+++.|+++|.+..+.-.. .++||.|-
T Consensus 36 ~~~~~~Lr~~aa~aL~~aq~~L~~--~G~~L~I~ 67 (202)
T 1r44_A 36 EVNRIVGTYELAESLLKAKELAAT--QGYGLLLW 67 (202)
T ss_dssp CSSSCEEEHHHHHHHHHHHHHTTS--SSEEEEEE
T ss_pred CCCcEEECHHHHHHHHHHHHHHHh--CCCeEEEE
Confidence 346678999999999999887643 35666663
No 122
>3fiq_A OBP1, RCG36470, odorant-binding protein 1F; lipocalin, oderant-binding protein, transport protein; 1.60A {Rattus norvegicus} SCOP: b.60.1.0
Probab=20.33 E-value=66 Score=20.63 Aligned_cols=33 Identities=12% Similarity=0.219 Sum_probs=24.9
Q ss_pred eeCHHHHHHHHHHHHhcCCCCccEEEEEeCCCC
Q psy9411 12 TLTEVAIKKVSHLIKKKGNLNLKLRVFIQGGGC 44 (118)
Q Consensus 12 ~IT~~A~~~l~~~~~~~~~~~~~lRi~v~~~GC 44 (118)
.++|+|.++++++....+.+...|-+....+-|
T Consensus 123 ~~s~e~~e~F~~~~~~~Gl~~enI~~~~~~~~C 155 (157)
T 3fiq_A 123 DLNKAQKQELRKLAEEYNIPNENTQHLVPTDTC 155 (157)
T ss_dssp CCCHHHHHHHHHHHHHTTCCGGGCEECGGGCCS
T ss_pred CCCHHHHHHHHHHHHHcCCCHHHEEeCCCCCCC
Confidence 589999999999999988755555555554545
No 123
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.26 E-value=22 Score=17.20 Aligned_cols=11 Identities=36% Similarity=1.123 Sum_probs=8.2
Q ss_pred CCCC-CCCCCCc
Q psy9411 106 TTCG-CGSSFST 116 (118)
Q Consensus 106 ~~Cg-CG~sf~~ 116 (118)
-.|. ||.+|..
T Consensus 13 ~~C~~C~k~F~~ 24 (46)
T 2ytp_A 13 YECSECGKAFAR 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred eECCcCCcccCC
Confidence 4675 9999874
No 124
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=20.14 E-value=25 Score=17.81 Aligned_cols=11 Identities=27% Similarity=0.649 Sum_probs=8.2
Q ss_pred CCCC-CCCCCCc
Q psy9411 106 TTCG-CGSSFST 116 (118)
Q Consensus 106 ~~Cg-CG~sf~~ 116 (118)
-.|. ||.+|..
T Consensus 25 ~~C~~C~k~f~~ 36 (54)
T 1yui_A 25 ATCPICYAVIRQ 36 (54)
T ss_dssp EECTTTCCEESS
T ss_pred ccCCCCCcccCC
Confidence 4675 9999874
No 125
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.08 E-value=22 Score=17.13 Aligned_cols=11 Identities=36% Similarity=1.141 Sum_probs=8.1
Q ss_pred CCCC-CCCCCCc
Q psy9411 106 TTCG-CGSSFST 116 (118)
Q Consensus 106 ~~Cg-CG~sf~~ 116 (118)
-.|. ||.+|..
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2ep3_A 13 YRCAECGKAFTD 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred eECCCCCchhCC
Confidence 4675 9999874
No 126
>1wge_A Hypothetical protein 2610018L09RIK; diphthamide,CSL zinc finger, ADP-ribosylating toxin, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.17.1
Probab=20.06 E-value=28 Score=20.84 Aligned_cols=12 Identities=33% Similarity=0.921 Sum_probs=9.5
Q ss_pred CCCCCCCCCCcC
Q psy9411 106 TTCGCGSSFSTY 117 (118)
Q Consensus 106 ~~CgCG~sf~~~ 117 (118)
..|.||..|.+.
T Consensus 31 y~CrCGd~F~it 42 (83)
T 1wge_A 31 YPCPCGDNFAIT 42 (83)
T ss_dssp ECCSSSSCEEEE
T ss_pred EeCCCCCEEEEC
Confidence 489999998753
Done!