BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy9414
         (582 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|B1XW11|SYQ_POLNS Glutamine--tRNA ligase OS=Polynucleobacter necessarius subsp.
           necessarius (strain STIR1) GN=glnS PE=3 SV=1
          Length = 590

 Score =  485 bits (1248), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 229/396 (57%), Positives = 297/396 (75%), Gaps = 8/396 (2%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           MR G+FKDG HVLR+KI+M   NI MRDP++YRIRH +H+RT + WCIYP+YD+ H ISD
Sbjct: 187 MRDGKFKDGEHVLRLKIDMAHPNIVMRDPVVYRIRHTDHHRTGSKWCIYPLYDFTHCISD 246

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNFIKRPFPKQYEFSRLNLTHTITSKRKLL 120
           A+ENI+HSICTLEF+++RP Y+WI+N + +    K P P Q+EF+RLNLT+TITSKRKLL
Sbjct: 247 ALENISHSICTLEFENNRPLYDWIVNSLKELGVFKDPVPHQHEFARLNLTYTITSKRKLL 306

Query: 121 KLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSWINIEILEQALRDD 180
           +L+E+K V+GWDDPRMPT++G+RRRGYTPESI+LFC+RIGVSK+DSWI++  L+QALRDD
Sbjct: 307 QLVEEKHVEGWDDPRMPTIVGIRRRGYTPESIRLFCERIGVSKADSWIDMSTLDQALRDD 366

Query: 181 LDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKE-KLRYFPISKILWIER 239
           L+++APR  AVL P+KL++ NF    +  C+AP    +H  Y E   R F  ++ LWIE 
Sbjct: 367 LEVRAPRATAVLKPLKLVVENFDAPTKEACSAP----RHPNYPEWGNREFNFTRELWIEA 422

Query: 240 DDFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVVEVYCKYFPDSKS 299
           DDFM+ P K +FRLYPPI    G+RVRLR+G+VVECTGF+ +    V +V   +FPDSKS
Sbjct: 423 DDFMQEPIKGFFRLYPPIDDQPGSRVRLRHGFVVECTGFETDAQGNVTQVNVTHFPDSKS 482

Query: 300 GTKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVNNKDFKLLINPNSKKVIS 359
           GT  S+NYKVKGNIHWIS + A+  E RLYD LF DPYP+   +K+F   INPNSK+ IS
Sbjct: 483 GTPGSNNYKVKGNIHWISAAEAIPAEVRLYDHLFTDPYPD-SGDKNFLDAINPNSKQTIS 541

Query: 360 AYLEPNLKLIFPKKHAQFEQN--LLPQTQCTKCGYP 393
           AYLEP +K    +   QFE++   +     +K G P
Sbjct: 542 AYLEPCMKDAKAEDRFQFERHGYFVADQSDSKPGKP 577


>sp|A4SZM1|SYQ_POLSQ Glutamine--tRNA ligase OS=Polynucleobacter necessarius subsp.
           asymbioticus (strain DSM 18221 / CIP 109841 /
           QLW-P1DMWA-1) GN=glnS PE=3 SV=1
          Length = 590

 Score =  484 bits (1246), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 223/381 (58%), Positives = 291/381 (76%), Gaps = 6/381 (1%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           MR G+FKDG HVLR+KI+M   NI MRDP++YRIRH +H+RT + WCIYP+YD+ H ISD
Sbjct: 187 MRDGKFKDGEHVLRLKIDMAHPNIVMRDPVVYRIRHTDHHRTGSKWCIYPLYDFTHCISD 246

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNFIKRPFPKQYEFSRLNLTHTITSKRKLL 120
           A+EN++HSICTLEF+++RP Y+WI+N + +    K P P QYEF+RLNLT+TITSKRKLL
Sbjct: 247 ALENVSHSICTLEFENNRPLYDWIVNSLKELGVFKDPVPHQYEFARLNLTYTITSKRKLL 306

Query: 121 KLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSWINIEILEQALRDD 180
           +L+E++ V+GWDDPRMPT++G+RRRGYTPESI+LFC+RIGVSK+DSWI++  L+QALRDD
Sbjct: 307 QLVEEQHVEGWDDPRMPTIVGIRRRGYTPESIRLFCERIGVSKADSWIDMSTLDQALRDD 366

Query: 181 LDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKE-KLRYFPISKILWIER 239
           L+ +APR  AVL P+KL++ NF       C+AP    +H  + E   R F  +K LWIE 
Sbjct: 367 LEARAPRATAVLKPLKLVVENFDAAHSEACSAP----RHPHHPEWGNREFNFTKELWIEA 422

Query: 240 DDFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVVEVYCKYFPDSKS 299
           DDFM+ P K +FRLYPPIG   G+RVRLR+G+VVECT F+ +    + +V   YFPDSKS
Sbjct: 423 DDFMQEPVKGFFRLYPPIGDQPGSRVRLRHGFVVECTDFETDAKGNITQVNVNYFPDSKS 482

Query: 300 GTKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVNNKDFKLLINPNSKKVIS 359
           GT  S+NYKVKGNIHWIS + A+  E RLYD LF DP+P+   +K+F   INP+SK+ I 
Sbjct: 483 GTPGSNNYKVKGNIHWISAAEAIPAEVRLYDHLFTDPHPD-SGDKNFLDTINPHSKETIK 541

Query: 360 AYLEPNLKLIFPKKHAQFEQN 380
           AYLEP +K + P+   QFE++
Sbjct: 542 AYLEPCMKDVKPEDRFQFERH 562


>sp|Q1LQ72|SYQ_RALME Glutamine--tRNA ligase OS=Ralstonia metallidurans (strain CH34 /
           ATCC 43123 / DSM 2839) GN=glnS PE=3 SV=1
          Length = 582

 Score =  470 bits (1209), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 214/380 (56%), Positives = 283/380 (74%), Gaps = 10/380 (2%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           MR G++ DG HVLR KI+M + NI MRDP++YRIRH +H+RT + WCIYPMYD+ H ISD
Sbjct: 184 MRDGKYADGEHVLRAKIDMTAPNIVMRDPVLYRIRHAHHHRTGDKWCIYPMYDFTHCISD 243

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNFIKRPFPKQYEFSRLNLTHTITSKRKLL 120
           AIENITHS+CTLEF+++RP Y+W+L  +        P P QYEF+RLNLT+ ITSKR+L 
Sbjct: 244 AIENITHSLCTLEFENNRPLYDWVLEHLRDAGVFANPLPHQYEFARLNLTYAITSKRRLK 303

Query: 121 KLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSWINIEILEQALRDD 180
           +L++++ V GWDDPRMPT++G+RRRGYTPESI+LFC R+GVSK+DSWI++  LE A+RDD
Sbjct: 304 QLVDEQRVTGWDDPRMPTIVGIRRRGYTPESIQLFCDRVGVSKADSWIDMSTLEGAVRDD 363

Query: 181 LDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKEKLRYFPISKILWIERD 240
           LD +APR +AVL+P+KLI+ N+ + Q  EC+AP+  +Q    +   R FP+S+ LWIER+
Sbjct: 364 LDARAPRSVAVLDPLKLILDNYPEGQSEECSAPVHPKQPEMGR---RVFPLSRELWIERE 420

Query: 241 DFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVVEVYCKYFPDSKSG 300
           DF E P K YFRL+P      GN+VRLRYGYV+ECTG  K+ +  V+ V+  Y P++KSG
Sbjct: 421 DFNENPPKGYFRLFP------GNKVRLRYGYVIECTGVDKDADGNVIAVHANYLPETKSG 474

Query: 301 TKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVNNKDFKLLINPNSKKVISA 360
           T  + + KVKGNIHW+S  HA   E RLYDRLF DP P+    K+F   +NP SKKV++A
Sbjct: 475 TPGADSVKVKGNIHWVSAPHACEAEVRLYDRLFNDPNPD-AGGKNFLDALNPESKKVVTA 533

Query: 361 YLEPNLKLIFPKKHAQFEQN 380
           YLEP L+   P+   QFE++
Sbjct: 534 YLEPGLRDAKPEDRFQFERH 553


>sp|B3R5N3|SYQ_CUPTR Glutamine--tRNA ligase OS=Cupriavidus taiwanensis (strain R1 / LMG
           19424) GN=glnS PE=3 SV=1
          Length = 585

 Score =  469 bits (1208), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 213/380 (56%), Positives = 287/380 (75%), Gaps = 10/380 (2%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           MR+G++ DG HVLR KI+M + NI MRDP++YRIRH +H+RT + WCIYPMYD+ H ISD
Sbjct: 187 MRAGKYADGEHVLRAKIDMAAPNIVMRDPVLYRIRHAHHHRTGDKWCIYPMYDFTHCISD 246

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNFIKRPFPKQYEFSRLNLTHTITSKRKLL 120
           A+ENITHS+CTLEF+++RP Y+W+L  +  +   + P P QYEF+RLNLT+ ITSKRKL 
Sbjct: 247 ALENITHSLCTLEFENNRPLYDWVLEHLRDSGVFRDPLPHQYEFARLNLTYAITSKRKLK 306

Query: 121 KLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSWINIEILEQALRDD 180
           +L++++ VDGWDDPRMPTL+G+RRRGYTPESI+LFC R+GV+K+DSWI++  LE ++RDD
Sbjct: 307 QLVDEQRVDGWDDPRMPTLVGVRRRGYTPESIQLFCDRVGVAKADSWIDMSTLEGSVRDD 366

Query: 181 LDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKEKLRYFPISKILWIERD 240
           LD +A R +AVL+P+KLII N+ + Q  EC+AP+  ++    K   R FP+S+ LWIER+
Sbjct: 367 LDGRAARGVAVLDPLKLIIDNYPEGQSEECSAPVHPKKPELGK---RVFPLSRELWIERE 423

Query: 241 DFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVVEVYCKYFPDSKSG 300
           DF E P K YFRL+P      GN+VRL+YGYV+ECTG  K+ +  V+ V+  Y PD+KSG
Sbjct: 424 DFNETPPKGYFRLFP------GNKVRLKYGYVIECTGVDKDADGNVIAVHASYLPDTKSG 477

Query: 301 TKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVNNKDFKLLINPNSKKVISA 360
           T  + + KVKG IHW+S +HA   E RLYDRLF DP P+    K+F   +NP+SK+VI+A
Sbjct: 478 TPGADSVKVKGVIHWVSAAHAYEAEVRLYDRLFNDPNPD-AGGKNFLDALNPDSKQVITA 536

Query: 361 YLEPNLKLIFPKKHAQFEQN 380
           YLEP L+   P+   QFE++
Sbjct: 537 YLEPGLREAQPEDRFQFERH 556


>sp|Q8Y199|SYQ_RALSO Glutamine--tRNA ligase OS=Ralstonia solanacearum (strain GMI1000)
           GN=glnS PE=3 SV=1
          Length = 580

 Score =  469 bits (1207), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 212/380 (55%), Positives = 288/380 (75%), Gaps = 10/380 (2%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           MR+G+++DG HVLR +I+M + NI MRDP++YRIRH +H+RT + WCIYPMYD+ H ISD
Sbjct: 182 MRAGKYQDGQHVLRARIDMAAPNIVMRDPVLYRIRHAHHHRTGDAWCIYPMYDFTHCISD 241

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNFIKRPFPKQYEFSRLNLTHTITSKRKLL 120
           A+ENITHS+CTLEF+++RP Y+W+L+ +     +  P P QYEF+RL+LT+ ITSKRKLL
Sbjct: 242 ALENITHSLCTLEFENNRPLYDWVLDHLRDAGALPAPLPHQYEFARLHLTYAITSKRKLL 301

Query: 121 KLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSWINIEILEQALRDD 180
           +L+ +K VDGWDDPRMPTL+G+RRRGYTPESI+LFC+R+GVSK+DSWI++ ILE A+RDD
Sbjct: 302 QLVNEKRVDGWDDPRMPTLVGIRRRGYTPESIQLFCERVGVSKADSWIDMSILEAAVRDD 361

Query: 181 LDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKEKLRYFPISKILWIERD 240
           LD +APR +AVL+P+KLI+ N   +    C+AP+  +Q    +   R FP+++ LWIER+
Sbjct: 362 LDARAPRSVAVLDPVKLILDNVPADFNEPCSAPVHPKQPELGR---REFPLTRELWIERE 418

Query: 241 DFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVVEVYCKYFPDSKSG 300
           DF E P K YFRL+P      GN+VRLRYGYV+ECTG  K+ +  +  V+    PD+KSG
Sbjct: 419 DFTETPPKGYFRLFP------GNKVRLRYGYVIECTGCDKDADGNITAVHANIIPDTKSG 472

Query: 301 TKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVNNKDFKLLINPNSKKVISA 360
           T  + + KVKGNIHW+S +HAL  E RLYDRLF DP P+   +K+F   +NP++K+V++A
Sbjct: 473 TPGADSVKVKGNIHWVSAAHALEAEVRLYDRLFTDPQPD-SGDKNFLDALNPDAKRVVTA 531

Query: 361 YLEPNLKLIFPKKHAQFEQN 380
           YLEP L    P+   QFE++
Sbjct: 532 YLEPTLATAKPEDRFQFERH 551


>sp|Q0K808|SYQ_CUPNH Glutamine--tRNA ligase OS=Cupriavidus necator (strain ATCC 17699 /
           H16 / DSM 428 / Stanier 337) GN=glnS PE=3 SV=1
          Length = 585

 Score =  468 bits (1205), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 213/380 (56%), Positives = 287/380 (75%), Gaps = 10/380 (2%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           MR+G++ DG HVLR KI+M + NI MRDP++YRIRH +H+RT + WCIYPMYD+ H ISD
Sbjct: 187 MRAGKYADGEHVLRAKIDMTAPNIVMRDPVLYRIRHAHHHRTGDKWCIYPMYDFTHCISD 246

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNFIKRPFPKQYEFSRLNLTHTITSKRKLL 120
           A+ENITHS+CTLEF+++RP Y+W+L  +  +   + P P QYEF+RLNLT+ ITSKRKL 
Sbjct: 247 ALENITHSLCTLEFENNRPLYDWVLEHLRDSGVFRDPLPHQYEFARLNLTYAITSKRKLK 306

Query: 121 KLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSWINIEILEQALRDD 180
           +L++++ VDGWDDPRMPTL+G+RRRGYTPESI+LFC R+GV+K+DSWI++  LE A+RDD
Sbjct: 307 QLVDEQRVDGWDDPRMPTLVGVRRRGYTPESIQLFCDRVGVAKADSWIDMSTLEGAVRDD 366

Query: 181 LDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKEKLRYFPISKILWIERD 240
           LD +A R +AVL+P+KLII N+ + Q  EC+AP+  ++    K   R FP+S+ LWIER+
Sbjct: 367 LDGRAARGVAVLDPLKLIIDNYPEGQSEECSAPVHPKKPELGK---RVFPLSRELWIERE 423

Query: 241 DFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVVEVYCKYFPDSKSG 300
           DF E P K YFRL+P      GN+VRL+YGYV+ECTG  K+ +  V+ V+  Y P++KSG
Sbjct: 424 DFNETPPKGYFRLFP------GNKVRLKYGYVIECTGVDKDADGNVIAVHASYLPETKSG 477

Query: 301 TKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVNNKDFKLLINPNSKKVISA 360
           T  + + KVKG IHW+S +HA   E RLYDRLF DP P+    K+F   +NP+SK+VI+A
Sbjct: 478 TPGADSVKVKGVIHWVSAAHAYEAEVRLYDRLFNDPNPD-AGGKNFLDALNPDSKQVITA 536

Query: 361 YLEPNLKLIFPKKHAQFEQN 380
           YLEP L+   P+   QFE++
Sbjct: 537 YLEPGLREAQPEDRFQFERH 556


>sp|B2U846|SYQ_RALPJ Glutamine--tRNA ligase OS=Ralstonia pickettii (strain 12J) GN=glnS
           PE=3 SV=1
          Length = 576

 Score =  468 bits (1203), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 213/380 (56%), Positives = 285/380 (75%), Gaps = 10/380 (2%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           MR+G++KDG HVLR KI+M + NI MRDP++YRIRH +H+RT + WCIYPMYD+ H ISD
Sbjct: 178 MRAGKYKDGEHVLRAKIDMAAPNIVMRDPVLYRIRHAHHHRTGDAWCIYPMYDFTHCISD 237

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNFIKRPFPKQYEFSRLNLTHTITSKRKLL 120
           A+ENITHS+CTLEF+++RP Y+W+L+ +     +  P P QYEF+RL+LT+ ITSKRKLL
Sbjct: 238 ALENITHSLCTLEFENNRPLYDWVLDHLRDAGVLAAPLPHQYEFARLHLTYAITSKRKLL 297

Query: 121 KLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSWINIEILEQALRDD 180
           +L+ +K VDGWDDPRMPTL+G+RRRGYTPESI+LFC+R+GVSK+DSWI++ ILE A+RDD
Sbjct: 298 QLVTEKRVDGWDDPRMPTLVGIRRRGYTPESIQLFCERVGVSKADSWIDMSILEGAVRDD 357

Query: 181 LDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKEKLRYFPISKILWIERD 240
           LD +APR +AVL+P+KL++ N   +    C+AP+  +Q    +   R FP+++ LWIER+
Sbjct: 358 LDARAPRSVAVLDPVKLVLDNVPADFNEPCSAPVHPKQPELGR---REFPLTRELWIERE 414

Query: 241 DFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVVEVYCKYFPDSKSG 300
           DF E P K YFRL+P      GN+VRLRYGYV+ECTG  K+    +  V+    PD+KSG
Sbjct: 415 DFTETPPKGYFRLFP------GNKVRLRYGYVIECTGCDKDAAGNITAVHANIIPDTKSG 468

Query: 301 TKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVNNKDFKLLINPNSKKVISA 360
           T  + + KVKGNIHW+S +HAL  E RLYDRLF DP P+   +K+F   +NPNSKK++ A
Sbjct: 469 TPGADSVKVKGNIHWVSAAHALEAEVRLYDRLFSDPQPD-SGDKNFLDALNPNSKKIVKA 527

Query: 361 YLEPNLKLIFPKKHAQFEQN 380
           +LEP L     +   QFE++
Sbjct: 528 FLEPTLATAKAEDRFQFERH 547


>sp|Q7VU94|SYQ_BORPE Glutamine--tRNA ligase OS=Bordetella pertussis (strain Tohama I /
           ATCC BAA-589 / NCTC 13251) GN=glnS PE=3 SV=1
          Length = 587

 Score =  461 bits (1187), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 212/379 (55%), Positives = 280/379 (73%), Gaps = 11/379 (2%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           MR G+  DG+ VLR +I+M S NIN+RDP++YR+RH  H+RT N WCIYPMY +AHP+ D
Sbjct: 189 MRDGKHPDGSLVLRARIDMASPNINLRDPVMYRVRHATHHRTGNAWCIYPMYSWAHPVED 248

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNFIKRPFPKQYEFSRLNLTHTITSKRKLL 120
           A+E ITHSICTLEF+D RPFY+WIL ++ +   + RP P QYEF+RLNLT+ +TSKRKLL
Sbjct: 249 ALEGITHSICTLEFEDQRPFYDWILARLAELGKLARPLPHQYEFARLNLTYVVTSKRKLL 308

Query: 121 KLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSWINIEILEQALRDD 180
           +L+ +  VDGWDDPRMPTL G+RRRGYTP SI+LFC R  VSKSDS I+  +LEQA+RDD
Sbjct: 309 QLVREGYVDGWDDPRMPTLFGLRRRGYTPSSIRLFCDRTAVSKSDSRIDYSLLEQAVRDD 368

Query: 181 LDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKEKLRYFPISKILWIERD 240
           LD  APR +AVL+P+KL+I+N+ + +   C+AP   R     +  +R FP ++ LWIE+D
Sbjct: 369 LDPVAPRSVAVLDPLKLVITNYPEGRSETCSAP---RNPHDPQAGVREFPFTRELWIEQD 425

Query: 241 DFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVVEVYCKYFPDSKSG 300
           DF E P KKYFRL+P      GN VRL+YGYVV CTGF K+++ +VVEV  +Y PD+KSG
Sbjct: 426 DFREEPPKKYFRLFP------GNTVRLKYGYVVRCTGFTKDESGKVVEVQAEYLPDTKSG 479

Query: 301 TKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVNNKDFKLLINPNSKKVISA 360
           T  + + KVKGNI W+S +HA+  +  LYDRLF D +P+   +KDF   +NPNSK+ + A
Sbjct: 480 TPGADSVKVKGNITWVSAAHAVPAQVHLYDRLFADAHPD-GGDKDFLACLNPNSKQTVQA 538

Query: 361 YLEPNLKLIFPKKHAQFEQ 379
           +LEP ++ + P    QFE+
Sbjct: 539 WLEPGIEAV-PGATWQFER 556


>sp|Q7W4T0|SYQ_BORPA Glutamine--tRNA ligase OS=Bordetella parapertussis (strain 12822 /
           ATCC BAA-587 / NCTC 13253) GN=glnS PE=3 SV=1
          Length = 587

 Score =  459 bits (1182), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 212/379 (55%), Positives = 279/379 (73%), Gaps = 11/379 (2%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           MR G+  DG+ VLR +I+M S NIN+RDP++YR+RH  H+RT N WCIYPMY +AHP+ D
Sbjct: 189 MRDGKHPDGSLVLRARIDMASPNINLRDPVMYRVRHATHHRTGNAWCIYPMYSWAHPVED 248

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNFIKRPFPKQYEFSRLNLTHTITSKRKLL 120
           A+E ITHSICTLEF+D RPFY+WIL ++ +   + RP P QYEF+RLNLT+ +TSKRKLL
Sbjct: 249 ALEGITHSICTLEFEDQRPFYDWILARLAELGKLARPLPHQYEFARLNLTYVVTSKRKLL 308

Query: 121 KLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSWINIEILEQALRDD 180
           +L+ +  VDGWDDPRMPTL G+RRRGYTP SI+LFC R  VSKSDS I+  +LEQA+RDD
Sbjct: 309 QLVREGYVDGWDDPRMPTLFGLRRRGYTPSSIRLFCDRTAVSKSDSRIDYSLLEQAVRDD 368

Query: 181 LDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKEKLRYFPISKILWIERD 240
           LD  APR +AVL+P+KL+I+N  + +   C+AP   R     +  +R FP ++ LWIE+D
Sbjct: 369 LDPVAPRSVAVLDPLKLVITNHPEGRSETCSAP---RNPHDPQAGVREFPFTRELWIEQD 425

Query: 241 DFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVVEVYCKYFPDSKSG 300
           DF E P KKYFRL+P      GN VRL+YGYVV CTGF K+++ +VVEV  +Y PD+KSG
Sbjct: 426 DFREEPPKKYFRLFP------GNTVRLKYGYVVRCTGFTKDESGKVVEVQAEYLPDTKSG 479

Query: 301 TKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVNNKDFKLLINPNSKKVISA 360
           T  + + KVKGNI W+S +HA+  +  LYDRLF D +P+   +KDF   +NPNSK+ + A
Sbjct: 480 TPGADSVKVKGNITWVSAAHAVPAQVHLYDRLFADAHPD-GGDKDFLACLNPNSKQTVQA 538

Query: 361 YLEPNLKLIFPKKHAQFEQ 379
           +LEP ++ + P    QFE+
Sbjct: 539 WLEPGIEAV-PGATWQFER 556


>sp|Q7WGA6|SYQ_BORBR Glutamine--tRNA ligase OS=Bordetella bronchiseptica (strain ATCC
           BAA-588 / NCTC 13252 / RB50) GN=glnS PE=3 SV=1
          Length = 587

 Score =  459 bits (1182), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 211/379 (55%), Positives = 280/379 (73%), Gaps = 11/379 (2%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           MR G+  DG+ VLR +I+M S NIN+RDP++YR+RH  H+RT N WCIYPMY +AHP+ D
Sbjct: 189 MRDGKHPDGSLVLRARIDMASPNINLRDPVMYRVRHATHHRTGNAWCIYPMYSWAHPVED 248

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNFIKRPFPKQYEFSRLNLTHTITSKRKLL 120
           A+E ITHSICTLEF+D RPFY+WIL ++ +   + RP P QYEF+RLNLT+ +TSKRKLL
Sbjct: 249 ALEGITHSICTLEFEDQRPFYDWILARLAELGKLARPLPHQYEFARLNLTYVVTSKRKLL 308

Query: 121 KLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSWINIEILEQALRDD 180
           +L+ +  VDGWDDPRMPTL G+RRRGYTP SI+LFC R  VSKSDS I+  +LEQA+RDD
Sbjct: 309 QLVREGYVDGWDDPRMPTLFGLRRRGYTPSSIRLFCDRTAVSKSDSRIDYSLLEQAVRDD 368

Query: 181 LDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKEKLRYFPISKILWIERD 240
           LD  APR +AVL+P+KL+I+N+ + +   C+AP   R     +  +R FP ++ LWIE+D
Sbjct: 369 LDPVAPRSVAVLDPLKLVITNYPEGRSETCSAP---RNPHDPQAGVREFPFTRELWIEQD 425

Query: 241 DFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVVEVYCKYFPDSKSG 300
           DF E P KKYFRL+P      GN VRL+YGYVV CTGF K+++ +VVEV  +Y PD+KSG
Sbjct: 426 DFREEPPKKYFRLFP------GNTVRLKYGYVVRCTGFTKDQSGKVVEVQAEYLPDTKSG 479

Query: 301 TKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVNNKDFKLLINPNSKKVISA 360
           T  + + KVKGNI W+S +HA+  +  LYDRLF D +P+   +KDF   +NP+SK+ + A
Sbjct: 480 TPGADSVKVKGNITWVSAAHAVPAQVHLYDRLFADAHPD-GGDKDFLACLNPHSKQTVQA 538

Query: 361 YLEPNLKLIFPKKHAQFEQ 379
           +LEP ++ + P    QFE+
Sbjct: 539 WLEPGIEAV-PGATWQFER 556


>sp|Q2KVX0|SYQ_BORA1 Glutamine--tRNA ligase OS=Bordetella avium (strain 197N) GN=glnS
           PE=3 SV=1
          Length = 586

 Score =  444 bits (1141), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 208/379 (54%), Positives = 270/379 (71%), Gaps = 11/379 (2%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           MR G+  DG+ VLR +I+M S NIN+RDP++YR+RH  H+RT + WCIYPMY +AHP+ D
Sbjct: 189 MRDGKHPDGSLVLRARIDMASPNINLRDPVMYRVRHAAHHRTGDKWCIYPMYSWAHPVED 248

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNFIKRPFPKQYEFSRLNLTHTITSKRKLL 120
           A+E ITHSICTLEF+D RPFY+WIL ++     + RP P+QYEFSRLN+++ +TSKRKLL
Sbjct: 249 ALEGITHSICTLEFEDQRPFYDWILARLADLGKLARPLPRQYEFSRLNMSYIVTSKRKLL 308

Query: 121 KLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSWINIEILEQALRDD 180
           +L+ +  VDGWDDPRMPTL G+RRRGYT  +I+LFC R  VSKSDS I+  +LEQA+RDD
Sbjct: 309 QLVREGYVDGWDDPRMPTLFGLRRRGYTASAIRLFCDRTAVSKSDSRIDYSLLEQAVRDD 368

Query: 181 LDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKEKLRYFPISKILWIERD 240
           LD    R +AVL+P+KL+I+N+  +Q   C AP   R     +   R FP S+ LWIERD
Sbjct: 369 LDPGTTRSVAVLDPLKLVITNYPKDQTEVCKAP---RNPHDPEAGQREFPFSRELWIERD 425

Query: 241 DFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVVEVYCKYFPDSKSG 300
           DF E   KKYFRL+P      GN VRL+YGYVV CTGF K++   + EV  +Y PD+KSG
Sbjct: 426 DFREEAPKKYFRLFP------GNLVRLKYGYVVRCTGFTKDEAGNITEVQAEYLPDTKSG 479

Query: 301 TKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVNNKDFKLLINPNSKKVISA 360
           T  + + KVKGNI W+S +HA+  E RLYDRLF DP+P+   +KDF   +NPNS + + A
Sbjct: 480 TPGADSVKVKGNITWVSAAHAVPAEVRLYDRLFADPHPD-GGDKDFLACLNPNSIQTVQA 538

Query: 361 YLEPNLKLIFPKKHAQFEQ 379
           +LEP  +   P    QFE+
Sbjct: 539 WLEPGTRAE-PGATWQFER 556


>sp|Q81ZS7|SYQ_NITEU Glutamine--tRNA ligase OS=Nitrosomonas europaea (strain ATCC 19718
           / NBRC 14298) GN=glnS1 PE=3 SV=1
          Length = 556

 Score =  438 bits (1126), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 210/382 (54%), Positives = 285/382 (74%), Gaps = 17/382 (4%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           MR+GEF DG HVLR +I+M S NIN+RDP+IYRIRH++H RT + WCIYPMYDY H ISD
Sbjct: 161 MRAGEFPDGVHVLRARIDMASPNINLRDPVIYRIRHIHHQRTGDKWCIYPMYDYTHCISD 220

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNFIKRP-FPKQYEFSRLNLTHTITSKRKL 119
           A+E ITHS+CTLEF+DHRP Y+W+L+++ +    K P  P+Q EF+RLNLT+++ SKRKL
Sbjct: 221 ALERITHSLCTLEFEDHRPLYDWVLDQLAE----KIPCHPQQIEFARLNLTYSVMSKRKL 276

Query: 120 LKLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSWINIEILEQALRD 179
           + L+E K+VDGW+DPRM TL G+RRRGYTPESI+LF +RIG+SK+DSWI++ ILE  LR+
Sbjct: 277 IDLVENKLVDGWNDPRMNTLAGLRRRGYTPESIRLFAERIGISKADSWIDMTILEDCLRE 336

Query: 180 DLDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKE-KLRYFPISKILWIE 238
           DL+ +A R +AVL+P+ LII NF D  E  C AP     H Q  E   R   ++K L+I+
Sbjct: 337 DLNERALRRIAVLDPVSLIIDNFPDGHEETCYAP----NHPQKPELGTRELRLTKQLYID 392

Query: 239 RDDFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVVEVYCKYFPDSK 298
           R+DFMEIP K +FRL P      G  VRLRY ++++CT   K+   +++E++C Y PD+K
Sbjct: 393 REDFMEIPNKGFFRLAP------GAEVRLRYAFIIKCTHVVKDDQGKILEIHCVYDPDTK 446

Query: 299 SGTKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVNNKDFKLLINPNSKKVI 358
           SGT  +   KV+GNIHW+S ++A ++E RLYDRLFID +P+    KDFK+ +NPNSK+VI
Sbjct: 447 SGTAGAETRKVRGNIHWLSATYAKAVEIRLYDRLFIDSHPD-TEGKDFKISLNPNSKEVI 505

Query: 359 SAYLEPNLKLIFPKKHAQFEQN 380
           + Y+EP+L    P++  QFE++
Sbjct: 506 TGYVEPSLCEAQPEQRFQFERH 527


>sp|P57000|SYQ_NEIMA Glutamine--tRNA ligase OS=Neisseria meningitidis serogroup A /
           serotype 4A (strain Z2491) GN=glnS PE=3 SV=1
          Length = 562

 Score =  373 bits (958), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 191/384 (49%), Positives = 254/384 (66%), Gaps = 19/384 (4%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           M++GEF DG+  LR+KI+M S NINMRDP+IYRIR  +H+ T + WCIYPMYDY H ISD
Sbjct: 162 MKNGEFPDGSKTLRLKIDMASGNINMRDPVIYRIRRAHHHNTGDKWCIYPMYDYTHCISD 221

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNFIKRPFPKQYEFSRLNLTHTITSKRKLL 120
           AIE ITHS+CTLEF+ HRP Y+W+L+ I   +  +   P+QYEFSRL L +TITSKRKL 
Sbjct: 222 AIEGITHSLCTLEFEAHRPLYDWVLDNIHAPHATR---PRQYEFSRLELLYTITSKRKLN 278

Query: 121 KLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSWINIEILEQALRDD 180
           +L+ +K V GWDDPRMPT+ GMRRRGYTPE ++LF KR G+SKS++ +++ +LE A+R++
Sbjct: 279 QLVVEKHVSGWDDPRMPTISGMRRRGYTPEGLRLFAKRAGISKSENIVDMSVLEGAIREE 338

Query: 181 LDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKEKLRYFPISKILWIERD 240
           L+  APR+MAVLNP+K+ ++NF +    +     F   H +  E  R  PIS+ ++IE D
Sbjct: 339 LENSAPRLMAVLNPLKVTLTNF-EAGRTQSRRAAFHPNHEEMGE--REVPISQTIYIEAD 395

Query: 241 DFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVVEVYCKYFPDSKSG 300
           DF E P K + RL P      G  VRLR+GYV++C    K++   VVE+ C    D  + 
Sbjct: 396 DFAENPPKGFKRLIP------GGEVRLRHGYVIKCDEVVKDEAGNVVELKCSI--DHDTL 447

Query: 301 TKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVNNKD-----FKLLINPNSK 355
            K     KVKG IHW+S  HA  I+ RLYDRLF    P+ V  +D     F   +NP S 
Sbjct: 448 GKNPEGRKVKGVIHWVSAEHAAEIKVRLYDRLFTIERPDAVRGEDGEYLPFTDFLNPESV 507

Query: 356 KVISAYLEPNLKLIFPKKHAQFEQ 379
           K I+AY EP  K +  +   QFE+
Sbjct: 508 KEITAYAEPAAKDLPAESRWQFER 531


>sp|Q0SVB1|SYQ_CLOPS Glutamine--tRNA ligase OS=Clostridium perfringens (strain SM101 /
           Type A) GN=glnS PE=3 SV=1
          Length = 552

 Score =  373 bits (958), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 187/379 (49%), Positives = 254/379 (67%), Gaps = 20/379 (5%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           MR GEF+DG+ VLR KI+M S NIN RDPIIYRI H +H+ T + WCIYPMYD+AHP+ D
Sbjct: 159 MRKGEFEDGSKVLRAKIDMSSPNINFRDPIIYRIAHASHHNTGDKWCIYPMYDFAHPLED 218

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNFIKRPFPKQYEFSRLNLTHTITSKRKLL 120
           AIE ITHSICTLEF DHRP Y+W + + +  N      P+Q EF+RLN+T+T+ SKRKL 
Sbjct: 219 AIEGITHSICTLEFADHRPLYDWFVKECEMEN-----IPRQIEFARLNITNTVMSKRKLK 273

Query: 121 KLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSWINIEILEQALRDD 180
           +L+++ IVDGWDDPRMPT+ G+RRRGYTP+SI+ FCK IGV+K+DS ++ ++LE  +R+D
Sbjct: 274 QLVDEGIVDGWDDPRMPTVAGLRRRGYTPKSIRNFCKAIGVAKADSTVDYQMLEHFIRED 333

Query: 181 LDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKEKL--RYFPISKILWIE 238
           L   APR MAV+NP+KL+I+N+      E  + +   ++    E    R    S+ ++IE
Sbjct: 334 LQETAPRAMAVINPLKLVITNYP-----EGKSEILEIENNPKDESAGKRAVTFSREIYIE 388

Query: 239 RDDFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVVEVYCKYFPDSK 298
           R+DFME P KKYFRL+P      GN VRL+  Y V+C    K++N EV E++C Y P++K
Sbjct: 389 REDFMENPPKKYFRLFP------GNEVRLKGAYFVKCNEVIKDENGEVTEIHCTYDPETK 442

Query: 299 SGTKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVNNKDFKLLINPNSKKVI 358
           SGT  +   KVKG IHW+  ++ +  E RLY+ L +D        K F   INPNS  + 
Sbjct: 443 SGTGFTGR-KVKGTIHWVDANNCIPAEFRLYEPLILDDCEE-NEGKHFLEQINPNSLTIC 500

Query: 359 SAYLEPNLKLIFPKKHAQF 377
             ++EP+ K   P+   Q 
Sbjct: 501 KGFIEPSAKDAKPQDKYQL 519


>sp|A5N6Y3|SYQ_CLOK5 Glutamine--tRNA ligase OS=Clostridium kluyveri (strain ATCC 8527 /
           DSM 555 / NCIMB 10680) GN=glnS PE=3 SV=1
          Length = 556

 Score =  372 bits (956), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 183/393 (46%), Positives = 262/393 (66%), Gaps = 17/393 (4%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           M++GEFKDG  VLR KI+M S NINMRDP++YRI H +H+ T + WCIYPMYD+AHP+ D
Sbjct: 159 MKNGEFKDGEKVLRAKIDMASPNINMRDPVLYRIAHASHHNTGDRWCIYPMYDFAHPLED 218

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNFIKRPFPKQYEFSRLNLTHTITSKRKLL 120
           AIE +THSICTLEF+DHRP Y+WI+ + +  N      PKQ EF+RLN+T+T+ SKRKL 
Sbjct: 219 AIEGVTHSICTLEFEDHRPLYDWIIQECEIEN-----RPKQIEFARLNMTNTVMSKRKLK 273

Query: 121 KLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSWINIEILEQALRDD 180
           +L+++  VDGWDDPRMPT+ G+RRRG+TPESI+ FC+ IGVSK+ S ++ ++L+  LRDD
Sbjct: 274 QLVDENFVDGWDDPRMPTIAGLRRRGFTPESIRNFCRAIGVSKASSIVDSQMLDYFLRDD 333

Query: 181 LDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKEKLRYFPISKILWIERD 240
           L+ +APR MA+LNP+K++I+N+    E +                +R  P S+ ++IE++
Sbjct: 334 LEKEAPRTMAILNPLKVVITNY---PEGKTETFKIENNPDDASAGVREVPFSREIYIEQE 390

Query: 241 DFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVVEVYCKYFPDSKSG 300
           DFME P KKY+RL+P      GN VRL+  Y ++CT   K+K+  V+E+ C Y P SK G
Sbjct: 391 DFMENPPKKYYRLFP------GNEVRLKSAYFIKCTEAIKDKDGNVIELRCTYDPASKGG 444

Query: 301 TKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVNNKDFKLLINPNSKKVISA 360
                  KV+G +HWI+   A+  E RLY+ L ++          F   +NPNS KV+  
Sbjct: 445 NS-PDGRKVRGTLHWINVDTAIPAEIRLYEPLILEQQEKEGEEDLFLDHVNPNSLKVVKG 503

Query: 361 YLEPNLKLIFPKKHAQFEQN--LLPQTQCTKCG 391
           ++EP++K +   +  QF ++   +   +C+K G
Sbjct: 504 FVEPDMKHVKSDEKFQFFRHGYFVLDGKCSKNG 536


>sp|Q8XMP3|SYQ_CLOPE Glutamine--tRNA ligase OS=Clostridium perfringens (strain 13 / Type
           A) GN=glnS PE=3 SV=1
          Length = 552

 Score =  371 bits (953), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 185/379 (48%), Positives = 255/379 (67%), Gaps = 20/379 (5%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           MR GEF+DG+ VLR KI+M S NIN RDPIIYRI H +H+ T + WCIYPMYD+AHP+ D
Sbjct: 159 MRKGEFEDGSKVLRAKIDMSSPNINFRDPIIYRIAHASHHNTGDKWCIYPMYDFAHPLED 218

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNFIKRPFPKQYEFSRLNLTHTITSKRKLL 120
           AIE ITHSICTLEF DHRP Y+W + + +  +      P+Q EF+RLN+T+T+ SKRKL 
Sbjct: 219 AIEGITHSICTLEFADHRPLYDWFVKECEMESV-----PRQIEFARLNITNTVMSKRKLK 273

Query: 121 KLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSWINIEILEQALRDD 180
           +L+++ IVDGWDDPRMPT+ G+RRRGYTP+SI+ FCK IGV+K+DS ++ ++LE  +R+D
Sbjct: 274 QLVDEGIVDGWDDPRMPTVAGLRRRGYTPKSIRNFCKAIGVAKADSTVDSQMLEHFIRED 333

Query: 181 LDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKEKL--RYFPISKILWIE 238
           L   APR MAV+NP+KL+I+N+ + +     + +   ++    E    R    S+ ++IE
Sbjct: 334 LQETAPRAMAVINPLKLVITNYPEGE-----SEILEIENNPKDESAGKRAVTFSREVYIE 388

Query: 239 RDDFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVVEVYCKYFPDSK 298
           R+DFME P KKYFRL+P      GN VRL+  Y V+C    K++N EV E++C Y P++K
Sbjct: 389 REDFMENPPKKYFRLFP------GNEVRLKGAYFVKCNEVIKDENGEVTEIHCTYDPETK 442

Query: 299 SGTKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVNNKDFKLLINPNSKKVI 358
           SGT  +   KVKG IHW+  ++ +  E RLY+ L +D        K F   INPNS  + 
Sbjct: 443 SGTGFTGR-KVKGTIHWVDANNCIPAEFRLYEPLILDDCEE-NEGKHFLEQINPNSLTIC 500

Query: 359 SAYLEPNLKLIFPKKHAQF 377
             ++EP+ K   P+   Q 
Sbjct: 501 KGFIEPSAKDAKPQDKYQL 519


>sp|Q0TTG1|SYQ_CLOP1 Glutamine--tRNA ligase OS=Clostridium perfringens (strain ATCC
           13124 / NCTC 8237 / Type A) GN=glnS PE=3 SV=1
          Length = 552

 Score =  371 bits (953), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 185/379 (48%), Positives = 255/379 (67%), Gaps = 20/379 (5%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           MR GEF+DG+ VLR KI+M S NIN RDPIIYRI H +H+ T + WCIYPMYD+AHP+ D
Sbjct: 159 MRKGEFEDGSKVLRAKIDMSSPNINFRDPIIYRIAHASHHNTGDKWCIYPMYDFAHPLED 218

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNFIKRPFPKQYEFSRLNLTHTITSKRKLL 120
           AIE ITHSICTLEF DHRP Y+W + + +  +      P+Q EF+RLN+T+T+ SKRKL 
Sbjct: 219 AIEGITHSICTLEFADHRPLYDWFVKECEMESV-----PRQIEFARLNITNTVMSKRKLK 273

Query: 121 KLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSWINIEILEQALRDD 180
           +L+++ IVDGWDDPRMPT+ G+RRRGYTP+SI+ FCK IGV+K+DS ++ ++LE  +R+D
Sbjct: 274 QLVDEGIVDGWDDPRMPTVAGLRRRGYTPKSIRNFCKAIGVAKADSTVDSQMLEHFIRED 333

Query: 181 LDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKEKL--RYFPISKILWIE 238
           L   APR MAV+NP+KL+I+N+ + +     + +   ++    E    R    S+ ++IE
Sbjct: 334 LQETAPRAMAVINPLKLVITNYPEGE-----SEILEIENNPKDESAGKRAVTFSREVYIE 388

Query: 239 RDDFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVVEVYCKYFPDSK 298
           R+DFME P KKYFRL+P      GN VRL+  Y V+C    K++N EV E++C Y P++K
Sbjct: 389 REDFMENPPKKYFRLFP------GNEVRLKGAYFVKCNEVIKDENGEVTEIHCTYDPETK 442

Query: 299 SGTKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVNNKDFKLLINPNSKKVI 358
           SGT  +   KVKG IHW+  ++ +  E RLY+ L +D        K F   INPNS  + 
Sbjct: 443 SGTGFTGR-KVKGTIHWVDANNCIPAEFRLYEPLILDDCEE-NEGKHFLEQINPNSLTIC 500

Query: 359 SAYLEPNLKLIFPKKHAQF 377
             ++EP+ K   P+   Q 
Sbjct: 501 KGFIEPSAKDAKPQDKYQL 519


>sp|Q7NX86|SYQ_CHRVO Glutamine--tRNA ligase OS=Chromobacterium violaceum (strain ATCC
           12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 /
           NCTC 9757) GN=glnS PE=3 SV=1
          Length = 560

 Score =  370 bits (951), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 185/384 (48%), Positives = 254/384 (66%), Gaps = 21/384 (5%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           M++GEF DG+  LR+KI+M S NIN+RDP IYRIR V+H+RT + WCIYPMYDY H ISD
Sbjct: 163 MKNGEFPDGSKTLRLKIDMASGNINLRDPAIYRIRRVHHHRTGDKWCIYPMYDYTHCISD 222

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNFIKRPFPKQYEFSRLNLTHTITSKRKLL 120
           AIE ITHS+C+LEF+DHRP Y+W+L+ I   +      P+Q EFSRL L + +TSKRKL 
Sbjct: 223 AIEGITHSLCSLEFEDHRPLYDWVLDNISIEH-----HPQQIEFSRLELLYALTSKRKLQ 277

Query: 121 KLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSWINIEILEQALRDD 180
            L+    V GWDDPRMPT+ GMRRRGY+P  IKLF +RIGVSKS++ I++ ILE A+R+ 
Sbjct: 278 ALVNDGAVTGWDDPRMPTIAGMRRRGYSPAGIKLFAQRIGVSKSENIIDMAILEGAVRET 337

Query: 181 LDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKEKLRYFPISKILWIERD 240
           L+  +PR+MAV+NP+K+ ++N+        +AP F   H ++ E  R  PI++ +WIERD
Sbjct: 338 LENDSPRVMAVVNPLKVTLTNYDAAVTASRSAP-FHPHHPEFGE--RDVPIAREIWIERD 394

Query: 241 DFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVVEVYCKYFPDSKSG 300
           DF E P  K+ RL       +G  VRLRY YV++C    K+  +E+VE+ C    D  + 
Sbjct: 395 DFAETPPPKWQRL------TAGGEVRLRYSYVIKCDEVVKDAADEIVELKCSI--DHDTL 446

Query: 301 TKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVNNK-----DFKLLINPNSK 355
            K     KVKG IHW+S  HA+  + R Y+RLF +  P+ V  +     DF+  +NP S 
Sbjct: 447 GKNPEGRKVKGVIHWVSAEHAIQADVRWYERLFTEQRPDAVRGEDGEYVDFRQFLNPESL 506

Query: 356 KVISAYLEPNLKLIFPKKHAQFEQ 379
           K++ AY+E ++    P+   QFE+
Sbjct: 507 KLVPAYVEASVLQAEPESRFQFER 530


>sp|Q5F7G0|SYQ_NEIG1 Glutamine--tRNA ligase OS=Neisseria gonorrhoeae (strain ATCC 700825
           / FA 1090) GN=glnS PE=3 SV=2
          Length = 562

 Score =  370 bits (951), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 188/384 (48%), Positives = 253/384 (65%), Gaps = 19/384 (4%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           M++GEF DG+  LR+KI+M + NINMRDP+IYRIR  +H+ T + WCIYPMYDY H ISD
Sbjct: 162 MKNGEFPDGSKTLRLKIDMAAGNINMRDPVIYRIRRAHHHNTGDKWCIYPMYDYTHCISD 221

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNFIKRPFPKQYEFSRLNLTHTITSKRKLL 120
           AIE ITHS+CTLEF+ HRP Y+W+L+ I   +  +   P+QYEFSRL L +TITSKRKL 
Sbjct: 222 AIEGITHSLCTLEFEAHRPLYDWVLDNIPALHATR---PRQYEFSRLELLYTITSKRKLN 278

Query: 121 KLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSWINIEILEQALRDD 180
           +L+ +K V GWDDPRMPT+ GMRRRGYTPE ++LF KR G+SKS++ +++ +LE A+R++
Sbjct: 279 QLVVEKHVSGWDDPRMPTISGMRRRGYTPEGVRLFAKRAGISKSENIVDMSVLEGAIREE 338

Query: 181 LDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKEKLRYFPISKILWIERD 240
           L+  APR+MAVLNP+K+ ++NF   +  +     F   H +  +  R  P+S+ ++IE D
Sbjct: 339 LENSAPRLMAVLNPLKVTLTNFQAGK-TQSRRAAFHPNHEEMGD--REVPVSQTIYIEAD 395

Query: 241 DFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVVEVYCKYFPDSKSG 300
           DF E P K + RL P      G  VRLR+GYV++C    K++   VVE+ C    D  + 
Sbjct: 396 DFAENPPKGFKRLIP------GGEVRLRHGYVIKCGEVVKDEAGNVVELKCSI--DHDTL 447

Query: 301 TKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVNNKD-----FKLLINPNSK 355
            K     KVKG IHW+S  HA  I+ RLYDRLF    P  V  +D     F   +NP S 
Sbjct: 448 GKNPEGRKVKGVIHWVSAEHAAEIKVRLYDRLFTVERPGAVRGEDGEYLPFTDFLNPESV 507

Query: 356 KVISAYLEPNLKLIFPKKHAQFEQ 379
           K I+AY EP  K +  +   QFE+
Sbjct: 508 KEITAYAEPAAKDLPAESRWQFER 531


>sp|P56927|SYQ_NEIMB Glutamine--tRNA ligase OS=Neisseria meningitidis serogroup B
           (strain MC58) GN=glnS PE=3 SV=1
          Length = 562

 Score =  369 bits (946), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 190/384 (49%), Positives = 253/384 (65%), Gaps = 19/384 (4%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           M++GEF DG+  LR+KI+M S NINMRDP+IYRIR  +H+ T + WCIYPMYDY H ISD
Sbjct: 162 MKNGEFPDGSKTLRLKIDMASGNINMRDPVIYRIRRAHHHNTGDKWCIYPMYDYTHCISD 221

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNFIKRPFPKQYEFSRLNLTHTITSKRKLL 120
           AIE ITHS+CTLEF+ HRP Y+ +L+ I   +  +   P+QYEFSRL L +TITSKRKL 
Sbjct: 222 AIEGITHSLCTLEFEAHRPLYDCVLDNIPAPHATR---PRQYEFSRLELLYTITSKRKLN 278

Query: 121 KLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSWINIEILEQALRDD 180
           +L+ +K V GWDDPRMPT+ GMRRRGYTPE ++LF KR G+SKS++ +++ +LE A+R++
Sbjct: 279 QLVVEKHVSGWDDPRMPTISGMRRRGYTPEGLRLFAKRAGISKSENIVDMSVLEGAIREE 338

Query: 181 LDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKEKLRYFPISKILWIERD 240
           L+  APR+MAVLNP+K+ ++NF +    +     F   H +  E  R  PIS+ ++IE D
Sbjct: 339 LENSAPRLMAVLNPLKVTLTNF-ETGRTQSRRAAFHPNHEEMGE--REVPISQTIYIEAD 395

Query: 241 DFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVVEVYCKYFPDSKSG 300
           DF E P K + RL P      G  VRLR+GYV++C    K++   VVE+ C    D  + 
Sbjct: 396 DFAENPPKGFKRLIP------GGEVRLRHGYVIKCDEVVKDEAGNVVELKCSI--DHDTL 447

Query: 301 TKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVNNKD-----FKLLINPNSK 355
            K     KVKG IHW+S  HA  I+ RLYDRLF    P+ V  +D     F   +NP S 
Sbjct: 448 GKNPEGRKVKGVIHWVSAEHAAEIKVRLYDRLFTVERPDAVRGEDGEYLPFTDFLNPESV 507

Query: 356 KVISAYLEPNLKLIFPKKHAQFEQ 379
           K I+AY EP  K +  +   QFE+
Sbjct: 508 KEITAYAEPAAKDLPAESRWQFER 531


>sp|Q3BX52|SYQ_XANC5 Glutamine--tRNA ligase OS=Xanthomonas campestris pv. vesicatoria
           (strain 85-10) GN=glnS PE=3 SV=1
          Length = 579

 Score =  365 bits (938), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 180/394 (45%), Positives = 250/394 (63%), Gaps = 24/394 (6%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           MR+GEF DGA  LR KI+M S NIN+RDP +YRI+HV H  T N W IYPMYD+AH + D
Sbjct: 167 MRAGEFPDGARTLRAKIDMASGNINLRDPALYRIKHVEHQNTGNAWPIYPMYDFAHSLGD 226

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNF--IKRPF-----------PKQYEFSRL 107
           A+E ITHS+CTLEF+DHRP Y+W ++K+D      + +P            P+Q EFSRL
Sbjct: 227 AVEGITHSLCTLEFEDHRPLYDWCVDKVDLAGHPELLQPLLDKGLPREAAKPRQIEFSRL 286

Query: 108 NLTHTITSKRKLLKLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSW 167
           N+ +T+ SKRKL  L+E+++VDGWDDPRM TL G+RRRGYTP +++LF  R+G+SK +S 
Sbjct: 287 NINYTVMSKRKLTALVEEQLVDGWDDPRMYTLQGLRRRGYTPAAMRLFVDRVGISKQNSL 346

Query: 168 INIEILEQALRDDLDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKEKLR 227
           I+  +LE  LR+DLD  APR MAV++P+KL+++N     E       FS          R
Sbjct: 347 IDFSVLEGCLREDLDAAAPRRMAVIDPLKLVLTNL---PEGHTETLQFSNHPKDESFGTR 403

Query: 228 YFPISKILWIERDDFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVV 287
             P ++ LWIER+DF E+P K + RL P      G  +RLR   +       KN + E+V
Sbjct: 404 EVPFARELWIEREDFAEVPPKGWKRLVP------GGEIRLRGAGIARVDEVIKNADGEIV 457

Query: 288 EVYCKYFPDSKSGTKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVN-NKDF 346
           E+     P+S+ G +  +N KVKG IHW+S  HA+  E RLYDRLF    P+  +  K +
Sbjct: 458 ELRGWLDPESRPGME-GANRKVKGTIHWVSAVHAVEAEIRLYDRLFSVEKPDDESEGKTY 516

Query: 347 KLLINPNSKKVISAYLEPNLKLIFPKKHAQFEQN 380
           +  +NP SK+ +  Y+EP+  +  P++  QFE++
Sbjct: 517 RDYLNPESKRNVRGYVEPSAAMAAPEQAFQFERS 550


>sp|Q8PNZ5|SYQ_XANAC Glutamine--tRNA ligase OS=Xanthomonas axonopodis pv. citri (strain
           306) GN=glnS PE=3 SV=1
          Length = 579

 Score =  365 bits (937), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 180/394 (45%), Positives = 250/394 (63%), Gaps = 24/394 (6%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           MR+GEF DGA  LR KI+M S NIN+RDP +YRI+HV H  T N W IYPMYD+AH + D
Sbjct: 167 MRAGEFPDGARTLRAKIDMASGNINLRDPALYRIKHVEHQNTGNAWPIYPMYDFAHSLGD 226

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNF--IKRPF-----------PKQYEFSRL 107
           A+E ITHS+CTLEF+DHRP Y+W ++K+D      + +P            P+Q EFSRL
Sbjct: 227 AVEGITHSLCTLEFEDHRPLYDWCVDKVDLVGHPELLQPLLDKGLPREAAKPRQIEFSRL 286

Query: 108 NLTHTITSKRKLLKLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSW 167
           N+ +T+ SKRKL  L+E+++VDGWDDPRM TL G+RRRGYTP +++LF  R+G+SK +S 
Sbjct: 287 NINYTVMSKRKLTALVEEQLVDGWDDPRMYTLQGLRRRGYTPAAMRLFVDRVGISKQNSL 346

Query: 168 INIEILEQALRDDLDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKEKLR 227
           I+  +LE  LR+DLD  APR MAV++P+KL+++N     E       FS          R
Sbjct: 347 IDFSVLEGCLREDLDAAAPRRMAVIDPLKLVLTNL---PEGHTETLQFSNHPKDDSFGTR 403

Query: 228 YFPISKILWIERDDFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVV 287
             P ++ LWIER+DF E+P K + RL P      G  +RLR   +       KN + E+V
Sbjct: 404 EVPFARELWIEREDFAEVPPKGWKRLVP------GGEIRLRGAGIARVDEVIKNADGEIV 457

Query: 288 EVYCKYFPDSKSGTKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVN-NKDF 346
           E+     P+S+ G +  +N KVKG IHW+S +HA+  E RLYDRLF    P+  +  K +
Sbjct: 458 ELRGWLDPESRPGME-GANRKVKGTIHWVSAAHAVEAEIRLYDRLFSVEKPDDESEGKTY 516

Query: 347 KLLINPNSKKVISAYLEPNLKLIFPKKHAQFEQN 380
           +  +NP SK+ +  Y+EP+  +  P++  QFE+ 
Sbjct: 517 RDYLNPESKRNVRGYVEPSAAMAAPEQAFQFERT 550


>sp|Q9PDP1|SYQ_XYLFA Glutamine--tRNA ligase OS=Xylella fastidiosa (strain 9a5c) GN=glnS
           PE=3 SV=1
          Length = 580

 Score =  365 bits (936), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 182/393 (46%), Positives = 251/393 (63%), Gaps = 24/393 (6%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           MR+G F DG   LR KI+M S NIN+RDP +YRI+HV H  T N W IYPMYD+AH +SD
Sbjct: 167 MRAGTFPDGTRTLRAKIDMASGNINLRDPALYRIKHVEHQNTGNTWPIYPMYDFAHALSD 226

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTN------------FIKRPF-PKQYEFSRL 107
           AIE ITHS+CTLEF+DHRP Y+W +N +D  N            F + P  P+Q EFSRL
Sbjct: 227 AIEGITHSLCTLEFEDHRPLYDWCVNHVDLPNNSHLLKPLLDKGFPQEPSQPRQIEFSRL 286

Query: 108 NLTHTITSKRKLLKLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSW 167
           N+ +T+ SKRKL  L+++K+V+GWDDPRM TL G+RRRGYTP +++LF +RIG+SK +S 
Sbjct: 287 NINYTVMSKRKLTALVDEKLVEGWDDPRMYTLQGLRRRGYTPAAMRLFVERIGISKQNSI 346

Query: 168 INIEILEQALRDDLDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKEKLR 227
           I+  +LE  LR++LD  APR MA + P+KL+++N  ++ E +   P   +  TQ     R
Sbjct: 347 IDFSVLENCLRENLDTIAPRRMATIAPLKLVLTNLPEDHEEQLIFPNHPKDDTQ---GTR 403

Query: 228 YFPISKILWIERDDFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVV 287
             P S+ LWIERDDF EIP K + RL P      G  VRLR   +       KN   +++
Sbjct: 404 TMPFSRELWIERDDFSEIPPKGWKRLVP------GGEVRLRGAGIARVDEVVKNAAGDII 457

Query: 288 EVYCKYFPDSKSGTKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNI-VNNKDF 346
            ++    P S+ G +  ++ KVKG IHW+S  HA++ E RLYDRLF    P+   + K +
Sbjct: 458 ALHGWLDPTSRPGME-GAHRKVKGTIHWVSAPHAVAAEIRLYDRLFSVEKPDDNTDGKTY 516

Query: 347 KLLINPNSKKVISAYLEPNLKLIFPKKHAQFEQ 379
           + ++NP+SK+V+  Y+EP      P+   QFE+
Sbjct: 517 RDVLNPDSKRVVHGYIEPAAAQTAPEHAFQFER 549


>sp|Q5GWF4|SYQ_XANOR Glutamine--tRNA ligase OS=Xanthomonas oryzae pv. oryzae (strain
           KACC10331 / KXO85) GN=glnS PE=3 SV=1
          Length = 579

 Score =  363 bits (933), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 178/394 (45%), Positives = 250/394 (63%), Gaps = 24/394 (6%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           MR+GEF DGA  LR KI+M S NIN+RDP +YRI+HV H  T N W IYPMYD+AH + D
Sbjct: 167 MRAGEFPDGARTLRAKIDMASGNINLRDPALYRIKHVEHQNTGNAWPIYPMYDFAHSLGD 226

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNF--IKRPF-----------PKQYEFSRL 107
           A+E ITHS+CTLEF+DHRP Y+W ++K+D      + +P            P+Q EFSRL
Sbjct: 227 AVEGITHSLCTLEFEDHRPLYDWCVDKVDLVGHPELLQPLLDKGLPREAAKPRQIEFSRL 286

Query: 108 NLTHTITSKRKLLKLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSW 167
           N+ +T+ SKRKL  L+E+++VDGWDDPRM TL G+RRRGYTP +++LF +R+G+SK +S 
Sbjct: 287 NINYTVMSKRKLTALVEEQLVDGWDDPRMYTLQGLRRRGYTPAAMRLFVERVGISKQNSL 346

Query: 168 INIEILEQALRDDLDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKEKLR 227
           I+  +LE  LR+DLD  A R MAV++P+KL+++N     E       FS          R
Sbjct: 347 IDFSVLEGCLREDLDAAAARRMAVIDPLKLVLTNL---PEGHTETLQFSNHPKDESFGTR 403

Query: 228 YFPISKILWIERDDFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVV 287
             P +++LWIER+DF E+P K + RL P      G  +RLR   +       KN + ++V
Sbjct: 404 EVPFARVLWIEREDFAEVPPKGWKRLVP------GGEIRLRGAGIARVDEVIKNADGDIV 457

Query: 288 EVYCKYFPDSKSGTKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVN-NKDF 346
            +     P+S+ G +  +N KVKG IHW+S +HA+  E RLYDRLF    P+  +  K +
Sbjct: 458 ALRGWLDPESRPGME-GANRKVKGTIHWVSAAHAVEAEIRLYDRLFSVEKPDDESEGKTY 516

Query: 347 KLLINPNSKKVISAYLEPNLKLIFPKKHAQFEQN 380
           +  +NP SK+ +  Y+EP+  L  P++  QFE+ 
Sbjct: 517 RDYLNPESKRNVRGYVEPSAALAAPEQAFQFERT 550


>sp|Q2NZL7|SYQ_XANOM Glutamine--tRNA ligase OS=Xanthomonas oryzae pv. oryzae (strain
           MAFF 311018) GN=glnS PE=3 SV=1
          Length = 579

 Score =  363 bits (933), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 178/394 (45%), Positives = 250/394 (63%), Gaps = 24/394 (6%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           MR+GEF DGA  LR KI+M S NIN+RDP +YRI+HV H  T N W IYPMYD+AH + D
Sbjct: 167 MRAGEFPDGARTLRAKIDMASGNINLRDPALYRIKHVEHQNTGNAWPIYPMYDFAHSLGD 226

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNF--IKRPF-----------PKQYEFSRL 107
           A+E ITHS+CTLEF+DHRP Y+W ++K+D      + +P            P+Q EFSRL
Sbjct: 227 AVEGITHSLCTLEFEDHRPLYDWCVDKVDLVGHPELLQPLLDKGLPREAAKPRQIEFSRL 286

Query: 108 NLTHTITSKRKLLKLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSW 167
           N+ +T+ SKRKL  L+E+++VDGWDDPRM TL G+RRRGYTP +++LF +R+G+SK +S 
Sbjct: 287 NINYTVMSKRKLTALVEEQLVDGWDDPRMYTLQGLRRRGYTPAAMRLFVERVGISKQNSL 346

Query: 168 INIEILEQALRDDLDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKEKLR 227
           I+  +LE  LR+DLD  A R MAV++P+KL+++N     E       FS          R
Sbjct: 347 IDFSVLEGCLREDLDAAAARRMAVIDPLKLVLTNL---PEGHTETLQFSNHPKDESFGTR 403

Query: 228 YFPISKILWIERDDFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVV 287
             P +++LWIER+DF E+P K + RL P      G  +RLR   +       KN + ++V
Sbjct: 404 EVPFARVLWIEREDFAEVPPKGWKRLVP------GGEIRLRGAGIARVDEVIKNADGDIV 457

Query: 288 EVYCKYFPDSKSGTKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVN-NKDF 346
            +     P+S+ G +  +N KVKG IHW+S +HA+  E RLYDRLF    P+  +  K +
Sbjct: 458 ALRGWLDPESRPGME-GANRKVKGTIHWVSAAHAVEAEIRLYDRLFSVEKPDDESEGKTY 516

Query: 347 KLLINPNSKKVISAYLEPNLKLIFPKKHAQFEQN 380
           +  +NP SK+ +  Y+EP+  L  P++  QFE+ 
Sbjct: 517 RDYLNPESKRNVRGYVEPSAALAAPEQAFQFERT 550


>sp|B0U6D0|SYQ_XYLFM Glutamine--tRNA ligase OS=Xylella fastidiosa (strain M12) GN=glnS
           PE=3 SV=1
          Length = 580

 Score =  363 bits (932), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 181/393 (46%), Positives = 250/393 (63%), Gaps = 24/393 (6%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           MR+G F DG   LR KI+M S NIN+RDP +YRI+HV H  T N W IYPMYD+AH +SD
Sbjct: 167 MRAGTFPDGTRTLRAKIDMASGNINLRDPALYRIKHVEHQNTGNTWPIYPMYDFAHALSD 226

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTN------------FIKRPF-PKQYEFSRL 107
           AIE ITHS+CTLEF+DHRP Y+W +N +D  N            F + P  P+Q EFSRL
Sbjct: 227 AIEGITHSLCTLEFEDHRPLYDWCINHVDLPNNSHLLKPLLDKGFPQEPSQPRQIEFSRL 286

Query: 108 NLTHTITSKRKLLKLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSW 167
           N+ +T+ SKRKL  L+++K+V+GWDDPRM TL G+RRRGYTP +++LF +RIG+SK +S 
Sbjct: 287 NINYTVMSKRKLTALVDEKLVEGWDDPRMYTLQGLRRRGYTPAAMRLFVERIGISKQNSI 346

Query: 168 INIEILEQALRDDLDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKEKLR 227
           I+  +LE  LR++LD  APR MA + P+KL+++N  ++ E +   P   +  TQ     R
Sbjct: 347 IDFSVLENCLRENLDTIAPRRMATIAPMKLVLTNLPEDHEEQLIFPNHPKDDTQ---GTR 403

Query: 228 YFPISKILWIERDDFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVV 287
             P S+ LWIERDDF E+P K + RL P      G  VRLR   +       KN    ++
Sbjct: 404 TVPFSRELWIERDDFSEVPPKGWKRLVP------GGEVRLRGAGIARIDEVVKNAEGHII 457

Query: 288 EVYCKYFPDSKSGTKLSSNYKVKGNIHWISKSHALSIEARLYDRLF-IDPYPNIVNNKDF 346
            ++    P S+ G +  ++ KVKG IHW+S  HA++ E RLYDRLF I+   +  + K +
Sbjct: 458 ALHGWLDPTSRPGME-GAHRKVKGTIHWVSAPHAVAAEIRLYDRLFSIEKPDDNTDGKTY 516

Query: 347 KLLINPNSKKVISAYLEPNLKLIFPKKHAQFEQ 379
           +  +NP+SK+V+  Y+EP      P+   QFE+
Sbjct: 517 RDFLNPDSKRVVHGYIEPAAAQTAPEHAFQFER 549


>sp|Q87DU6|SYQ_XYLFT Glutamine--tRNA ligase OS=Xylella fastidiosa (strain Temecula1 /
           ATCC 700964) GN=glnS PE=3 SV=1
          Length = 580

 Score =  363 bits (932), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 182/393 (46%), Positives = 249/393 (63%), Gaps = 24/393 (6%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           MR+G F DG   LR KI+M S NIN+RDP +YRI+HV H  T N W IYPMYD+AH +SD
Sbjct: 167 MRAGTFPDGTRTLRAKIDMASGNINLRDPALYRIKHVEHQNTGNTWPIYPMYDFAHALSD 226

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTN------------FIKRPF-PKQYEFSRL 107
           AIE ITHS+CTLEF+DHRP Y+W +N +D  N            F + P  P+Q EFSRL
Sbjct: 227 AIEGITHSLCTLEFEDHRPLYDWCINHVDLPNNSHLLKPLLDKGFPQEPSQPRQIEFSRL 286

Query: 108 NLTHTITSKRKLLKLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSW 167
           N+ +T+ SKRKL  L+++K+V+GWDDPRM TL G+RRRGYTP +++LF +RIG+SK +S 
Sbjct: 287 NINYTVMSKRKLTALVDEKLVEGWDDPRMYTLQGLRRRGYTPAAMRLFVERIGISKQNSI 346

Query: 168 INIEILEQALRDDLDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKEKLR 227
           I+  +LE  LR++LD  APR MA + P+KL+++N  ++ E +   P   +  TQ     R
Sbjct: 347 IDFSVLENCLRENLDTIAPRRMATIAPMKLVLTNLAEDHEEQLIFPNHPKDDTQ---GTR 403

Query: 228 YFPISKILWIERDDFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVV 287
             P S+ LWIERDDF E P K + RL P      G  VRLR   +       KN    V+
Sbjct: 404 TVPFSRELWIERDDFSEAPPKGWKRLIP------GGEVRLRGAGIARIDEVVKNAEGHVI 457

Query: 288 EVYCKYFPDSKSGTKLSSNYKVKGNIHWISKSHALSIEARLYDRLF-IDPYPNIVNNKDF 346
            ++    P S+ G +  ++ KVKG IHW+S  HA++ E RLYDRLF I+   +  + K +
Sbjct: 458 ALHGWLDPTSRPGME-GAHRKVKGTIHWVSAPHAVAAEIRLYDRLFSIEKPDDNTDGKTY 516

Query: 347 KLLINPNSKKVISAYLEPNLKLIFPKKHAQFEQ 379
           +  +NP+SK+V+  Y+EP      P+   QFE+
Sbjct: 517 RDFLNPDSKRVVHGYIEPAAAQTAPEHAFQFER 549


>sp|Q8PCB3|SYQ_XANCP Glutamine--tRNA ligase OS=Xanthomonas campestris pv. campestris
           (strain ATCC 33913 / NCPPB 528 / LMG 568) GN=glnS PE=3
           SV=1
          Length = 579

 Score =  359 bits (922), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 179/394 (45%), Positives = 247/394 (62%), Gaps = 24/394 (6%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           MR+GEF DGA  LR KI+M S NIN+RDP +YRI+HV H  T N W IYPMYD+AH + D
Sbjct: 167 MRAGEFPDGARTLRAKIDMASGNINLRDPALYRIKHVEHQNTGNAWPIYPMYDFAHSLGD 226

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTN-------FIKRPFPK------QYEFSRL 107
           A+E ITHS+CTLEF+DHRP Y+W ++K+D +         + + +PK      Q EFSRL
Sbjct: 227 AVEGITHSLCTLEFEDHRPLYDWCVDKVDLSGHPELLAPLLGKGYPKEAAKPRQIEFSRL 286

Query: 108 NLTHTITSKRKLLKLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSW 167
           N+ +T+ SKRKL  L+E+++VDGWDDPRM TL G+RRRGYTP +++LF  R+G+SK +S 
Sbjct: 287 NINYTVMSKRKLTALVEEQLVDGWDDPRMYTLQGLRRRGYTPAAMRLFVDRVGISKQNSV 346

Query: 168 INIEILEQALRDDLDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKEKLR 227
           I+  +LE  LR+DLD  A R MAV++P+KL+++N     E       FS          R
Sbjct: 347 IDFSVLEGCLREDLDAAAARRMAVIDPLKLVLTNL---PEGHTETLQFSNHPKDESFGTR 403

Query: 228 YFPISKILWIERDDFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVV 287
             P ++ LWIER+DF E+P K + RL P      G  +RLR   +       K+   E+V
Sbjct: 404 EVPFARELWIEREDFAEVPPKGWKRLVP------GGEIRLRGAGIARVDEVIKDAAGEIV 457

Query: 288 EVYCKYFPDSKSGTKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVN-NKDF 346
           E+     P+S+ G  + SN KVKG IHW+S  HA+  E RLYDRLF    P+  +  K +
Sbjct: 458 ELRGWLDPESRPGM-IGSNRKVKGTIHWVSAVHAVEAEIRLYDRLFSVEKPDDESEGKTY 516

Query: 347 KLLINPNSKKVISAYLEPNLKLIFPKKHAQFEQN 380
           +  +NP SK+ +  Y+EP+     P++  QFE+ 
Sbjct: 517 RDYLNPESKRSVRGYVEPSAAQAAPEQAFQFERT 550


>sp|Q4UR70|SYQ_XANC8 Glutamine--tRNA ligase OS=Xanthomonas campestris pv. campestris
           (strain 8004) GN=glnS PE=3 SV=1
          Length = 579

 Score =  359 bits (922), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 179/394 (45%), Positives = 247/394 (62%), Gaps = 24/394 (6%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           MR+GEF DGA  LR KI+M S NIN+RDP +YRI+HV H  T N W IYPMYD+AH + D
Sbjct: 167 MRAGEFPDGARTLRAKIDMASGNINLRDPALYRIKHVEHQNTGNAWPIYPMYDFAHSLGD 226

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTN-------FIKRPFPK------QYEFSRL 107
           A+E ITHS+CTLEF+DHRP Y+W ++K+D +         + + +PK      Q EFSRL
Sbjct: 227 AVEGITHSLCTLEFEDHRPLYDWCVDKVDLSGHPELLAPLLGKGYPKEAAKPRQIEFSRL 286

Query: 108 NLTHTITSKRKLLKLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSW 167
           N+ +T+ SKRKL  L+E+++VDGWDDPRM TL G+RRRGYTP +++LF  R+G+SK +S 
Sbjct: 287 NINYTVMSKRKLTALVEEQLVDGWDDPRMYTLQGLRRRGYTPAAMRLFVDRVGISKQNSV 346

Query: 168 INIEILEQALRDDLDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKEKLR 227
           I+  +LE  LR+DLD  A R MAV++P+KL+++N     E       FS          R
Sbjct: 347 IDFSVLEGCLREDLDAAAARRMAVIDPLKLVLTNL---PEGHTETLQFSNHPKDESFGTR 403

Query: 228 YFPISKILWIERDDFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVV 287
             P ++ LWIER+DF E+P K + RL P      G  +RLR   +       K+   E+V
Sbjct: 404 EVPFARELWIEREDFAEVPPKGWKRLVP------GGEIRLRGAGIARVDEVIKDAAGEIV 457

Query: 288 EVYCKYFPDSKSGTKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVN-NKDF 346
           E+     P+S+ G  + SN KVKG IHW+S  HA+  E RLYDRLF    P+  +  K +
Sbjct: 458 ELRGWLDPESRPGM-IGSNRKVKGTIHWVSAVHAVEAEIRLYDRLFSVEKPDDESEGKTY 516

Query: 347 KLLINPNSKKVISAYLEPNLKLIFPKKHAQFEQN 380
           +  +NP SK+ +  Y+EP+     P++  QFE+ 
Sbjct: 517 RDYLNPESKRSVRGYVEPSAAQAAPEQAFQFERT 550


>sp|Q88IU5|SYQ_PSEPK Glutamine--tRNA ligase OS=Pseudomonas putida (strain KT2440)
           GN=glnS PE=3 SV=1
          Length = 567

 Score =  356 bits (913), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 185/381 (48%), Positives = 242/381 (63%), Gaps = 19/381 (4%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           M++GEFKDG  VLR KI+M S N+N+RDPI+YRIRH +H++T + WCIYP YD+ H  SD
Sbjct: 174 MKAGEFKDGERVLRAKIDMASPNMNLRDPILYRIRHAHHHQTGDKWCIYPNYDFTHGQSD 233

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNFIKRPFPKQYEFSRLNLTHTITSKRKLL 120
           AIE ITHSICTLEF+ HRP Y+W L+     N      P+QYEFSRLNL +TITSKRKL 
Sbjct: 234 AIEGITHSICTLEFEGHRPLYDWFLD-----NLPVPAHPRQYEFSRLNLNYTITSKRKLK 288

Query: 121 KLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSWINIEILEQALRDD 180
           +L+++K VD WDDPRM TL G RRRGYTP SI+ FC+ IG ++SD  +++ +LE ++RDD
Sbjct: 289 QLVDEKHVDAWDDPRMSTLSGFRRRGYTPASIRNFCEMIGTNRSDGVVDMSMLEFSIRDD 348

Query: 181 LDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKEKLRYFPISKILWIERD 240
           LD  APR M VL P+K++I+N+ + Q  +   P    +H +    +R  P S+ L+I+RD
Sbjct: 349 LDRTAPRAMCVLRPLKVVITNYPEGQVEQLELP----RHPKEDMGVRVLPFSRELYIDRD 404

Query: 241 DFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVVEVYCKYFPDSKSG 300
           DFME P K Y RL P         VRLR  YV+      K+ +  +VE+ C Y PD+   
Sbjct: 405 DFMEEPPKGYKRLEP------AGEVRLRGSYVIRADEAIKDADGNIVELRCSYDPDTLG- 457

Query: 301 TKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPN-IVNNKDFKLLINPNSKKVIS 359
            K     KVKG IHW+    ++  E RLYDRLF  P P        F   INP S +V+S
Sbjct: 458 -KNPEGRKVKGVIHWVPAEGSVECEVRLYDRLFRSPNPEKTEEGGSFLDNINPASLQVLS 516

Query: 360 A-YLEPNLKLIFPKKHAQFEQ 379
               EP+L    P+   QFE+
Sbjct: 517 GCRAEPSLAQAQPEDRFQFER 537


>sp|Q188C8|SYQ_CLOD6 Glutamine--tRNA ligase OS=Clostridium difficile (strain 630)
           GN=glnS PE=3 SV=1
          Length = 554

 Score =  355 bits (910), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 184/385 (47%), Positives = 254/385 (65%), Gaps = 25/385 (6%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           M++GEFKDG   LR KI+M S NIN+RDPIIYRI H  H+ T + WCIYPMY +AHPI D
Sbjct: 159 MKNGEFKDGEKTLRAKIDMSSPNINLRDPIIYRISHSTHHNTGDKWCIYPMYAFAHPIED 218

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNFIKRPFPKQYEFSRLNLTHTITSKRKLL 120
           AIE ITHSICTLEF+D RP Y+W + + +  N      P+Q EF+RLN+ +T+ SKRKL 
Sbjct: 219 AIEGITHSICTLEFEDQRPLYDWFVKECEMEN-----IPRQIEFARLNINNTVMSKRKLK 273

Query: 121 KLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSWINIEILEQALRDD 180
           +L+++ IVDGWDDPR+PT+ G+RR+GYT E+++ FC  IGVSK +S ++ ++L+  LR++
Sbjct: 274 QLVDEGIVDGWDDPRVPTISGIRRKGYTAEALRNFCSEIGVSKVNSTVDSQMLDYFLREN 333

Query: 181 LDIKAPRIMAVLNPIKLIISNFLDNQ----EIECTAPLFSRQHTQYKEKLRYFPISKILW 236
           L  KAP  M VL P+KLII+N+ +++    EIE  A    +  +Q K   R  P S+ L+
Sbjct: 334 LQPKAPLTMGVLRPLKLIITNYPEDKIEMLEIENNA----KDESQGK---RLVPFSRELY 386

Query: 237 IERDDFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVVEVYCKYFPD 296
           IE+DDFME P KKYFR +P      GN VRL+  Y V+CT   K++N  VVE++  Y P+
Sbjct: 387 IEQDDFMEEPVKKYFRFFP------GNEVRLKGAYFVKCTDVIKDENGNVVEIHGTYDPE 440

Query: 297 SKSGTKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVNNKDFKLLINPNSKK 356
           +KSG+  +   KVK  IHW+    A+  E RL++ L +D  P     K F   INPNS +
Sbjct: 441 TKSGSGFTGR-KVKSTIHWVDAKSAIPCEFRLFEPLILDDIPE-NEGKHFLEQINPNSLE 498

Query: 357 VISAYLEPN-LKLIFPKKHAQFEQN 380
           ++  ++EP  +K   P    QF +N
Sbjct: 499 ILQGFVEPTQIKDAKPFDKFQFVRN 523


>sp|Q87YQ1|SYQ_PSESM Glutamine--tRNA ligase OS=Pseudomonas syringae pv. tomato (strain
           DC3000) GN=glnS PE=3 SV=1
          Length = 569

 Score =  349 bits (895), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 180/384 (46%), Positives = 248/384 (64%), Gaps = 25/384 (6%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           M++GEF+DGA VLR KI+M S N+N+RDPI+YRIRH +H++T + WCIYP+YD+ H  SD
Sbjct: 177 MKAGEFEDGARVLRAKIDMASPNMNLRDPILYRIRHAHHHQTGDKWCIYPIYDFTHGQSD 236

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNFIKRPFP---KQYEFSRLNLTHTITSKR 117
           AIE ITHSICTLEF+ HRP Y+W L+ +        P P   +QYEFSRLNL +TITSKR
Sbjct: 237 AIEGITHSICTLEFESHRPLYDWFLDNL--------PVPCKPRQYEFSRLNLNYTITSKR 288

Query: 118 KLLKLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSWINIEILEQAL 177
           KL +L+++K V+GWDDPRM TL G RRRGYTP+SI+ FC+ IG ++SD  ++  +LE ++
Sbjct: 289 KLKQLVDEKHVNGWDDPRMSTLSGFRRRGYTPKSIRNFCEMIGTNRSDGVVDFGMLEFSI 348

Query: 178 RDDLDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKEKLRYFPISKILWI 237
           RDDLD  APR M VL P+K++I+N+ + Q  +   P    +H +    +R  P S+ ++I
Sbjct: 349 RDDLDHSAPRAMCVLRPLKVVITNYPEGQVEKLELP----RHPKEDLGMRELPFSREIYI 404

Query: 238 ERDDFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVVEVYCKYFPDS 297
           +RDD+ME P K Y RL P         VRLR  YV+      K+ +  +VE+ C Y PD+
Sbjct: 405 DRDDYMEEPPKGYKRLEP------NGEVRLRGSYVIRADEAIKDADGNIVELRCSYDPDT 458

Query: 298 KSGTKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIV-NNKDFKLLINPNSKK 356
               K     KVKG +HW+  + ++  E RLYDRLF    P    +   F   INP+S +
Sbjct: 459 LG--KNPEGRKVKGVVHWVPAAESVECEVRLYDRLFRSANPEKAEDGASFLDNINPDSLQ 516

Query: 357 VISA-YLEPNLKLIFPKKHAQFEQ 379
           V++    EP+L    P+   QFE+
Sbjct: 517 VLTGCRAEPSLGHAQPEDRFQFER 540


>sp|Q89KR6|SYQ_BRAJA Glutamine--tRNA ligase OS=Bradyrhizobium japonicum (strain USDA
           110) GN=glnS PE=3 SV=1
          Length = 558

 Score =  348 bits (894), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 178/380 (46%), Positives = 249/380 (65%), Gaps = 19/380 (5%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           M++GEF +GA VLR KI+M + NIN+RDP++YRI H +H RT N WCIYP YDYAH  SD
Sbjct: 163 MKAGEFPNGARVLRAKIDMAAGNINLRDPVLYRILHAHHPRTGNAWCIYPSYDYAHGQSD 222

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNFIKRPFPKQYEFSRLNLTHTITSKRKLL 120
           AIE ITHSICTLEF+DHRP Y+W + K+   +      P QYEF+RLNLT+T+ SKR L 
Sbjct: 223 AIEGITHSICTLEFEDHRPLYDWFIEKLPVPS-----KPHQYEFARLNLTYTLLSKRVLT 277

Query: 121 KLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSWINIEILEQALRDD 180
           +L+ +  V GWDDPRMPT+ GMRRRG  P +++ F KRIGV+K++S +++ +LE  +R++
Sbjct: 278 QLVREGHVAGWDDPRMPTMAGMRRRGVPPAALREFVKRIGVAKANSVVDVGMLEFCIREE 337

Query: 181 LDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKEKLRYFPISKILWIERD 240
           L+  A R MAVL P+K++I N+ + Q  E  A       +    K+ +    + L+IE+D
Sbjct: 338 LNRTAQRRMAVLKPLKVVIENYPEGQTEELEAINHPDDPSAGTRKITF---GRELYIEQD 394

Query: 241 DFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVVEVYCKYFPDSKSG 300
           DFME P KK+FRL P      GN VRLRY Y V+CTG  KN++ EVVE+ C Y P ++ G
Sbjct: 395 DFMENPPKKFFRLSP------GNEVRLRYAYFVKCTGVIKNESGEVVELRCTYDPATRGG 448

Query: 301 TKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVNNKDFKLLINPNSKKVIS- 359
                  KVK  +HW+S + +   E R+Y++LF +P P+  N   F   +NP S +++S 
Sbjct: 449 NA-PDGRKVKATMHWLSAAASKPAEIRIYNQLFANPSPDASN---FAADLNPQSLEILSN 504

Query: 360 AYLEPNLKLIFPKKHAQFEQ 379
           A +E ++      +  QFE+
Sbjct: 505 ARVEASVAESNSTEPMQFER 524


>sp|Q4QK64|SYQ_HAEI8 Glutamine--tRNA ligase OS=Haemophilus influenzae (strain 86-028NP)
           GN=glnS PE=3 SV=1
          Length = 557

 Score =  346 bits (888), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 180/380 (47%), Positives = 244/380 (64%), Gaps = 20/380 (5%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           M++GEF +G   LR KI+M S  + MRDP+IYRI+  +H++T + WCIYPMYD+ H ISD
Sbjct: 169 MKNGEFAEGKASLRAKIDMASPFMVMRDPVIYRIKFASHHQTGDKWCIYPMYDFTHCISD 228

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNFIKRPFPKQYEFSRLNLTHTITSKRKLL 120
           AIE ITHSICTLEFQD+R  Y+W+L  I     I+RP P QYEFSRLNL  T+TSKRKLL
Sbjct: 229 AIERITHSICTLEFQDNRRLYDWVLENIS----IERPLPHQYEFSRLNLEGTLTSKRKLL 284

Query: 121 KLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSWINIEILEQALRDD 180
           KL+  +IVDGW+DPRMPT+ G+RRRGYTP S++ FC+RIGV+K D+ +    LE  +R+D
Sbjct: 285 KLVNDEIVDGWNDPRMPTISGLRRRGYTPASLREFCRRIGVTKQDNVVEYSALEACIRED 344

Query: 181 LDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKE-KLRYFPISKILWIER 239
           L+  APR MAV++P++++I NF      E  A L +  H    E   R  P +K L+I+R
Sbjct: 345 LNENAPRAMAVIDPVRVVIENF------ESEAVLTAPNHPNRPELGERQLPFTKELYIDR 398

Query: 240 DDFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVVEVYCKYFPDSKS 299
            DF E   K+Y RL        G  VRLR  YV++    +K+ N E+  ++C Y P++  
Sbjct: 399 ADFREEANKQYKRLV------LGKEVRLRNAYVIKAERVEKDANGEITTIFCTYDPET-L 451

Query: 300 GTKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVNNKDFKLLINPNSKKVIS 359
           G   +   KVKG IHW+S  +    E RLYDRLF  P P   +  D + ++NPNS  +  
Sbjct: 452 GKNPADGRKVKGVIHWVSAVNNHPAEFRLYDRLFTVPNPGAED--DIESVLNPNSLVIKQ 509

Query: 360 AYLEPNLKLIFPKKHAQFEQ 379
            ++E +L     +K  QFE+
Sbjct: 510 GFVEQSLANAEAEKGYQFER 529


>sp|Q87RG4|SYQ_VIBPA Glutamine--tRNA ligase OS=Vibrio parahaemolyticus serotype O3:K6
           (strain RIMD 2210633) GN=glnS PE=3 SV=1
          Length = 556

 Score =  345 bits (884), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 179/380 (47%), Positives = 240/380 (63%), Gaps = 19/380 (5%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           MR+GEF++G   LR KI+M S  + MRDP++YR+R   H++T + WCIYPMYD+ H ISD
Sbjct: 161 MRAGEFEEGKACLRAKIDMGSSFMVMRDPVLYRVRFATHHQTGDKWCIYPMYDFTHCISD 220

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNFIKRPFPKQYEFSRLNLTHTITSKRKLL 120
           A+E ITHSICTLEF D+R  Y+W+L+     N      P QYEFSRLNL +T+ SKRKL 
Sbjct: 221 ALEGITHSICTLEFMDNRRLYDWVLD-----NITIDCRPHQYEFSRLNLEYTVMSKRKLN 275

Query: 121 KLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSWINIEILEQALRDD 180
           +L+ +K+V+GWDDPRMPT+ G+RRRG+TP SI+ FCKRIGV+K ++ I    LE  +RDD
Sbjct: 276 QLVTEKLVNGWDDPRMPTVSGLRRRGFTPASIREFCKRIGVTKQENMIEFSSLESCIRDD 335

Query: 181 LDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKE-KLRYFPISKILWIER 239
           L+  APR MAVL+P+K++I NF    E+     L    H    E   R  P ++ +WIER
Sbjct: 336 LNENAPRAMAVLDPVKVVIENF----EVGAVENLTLANHPNKPEMGEREVPFTREVWIER 391

Query: 240 DDFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVVEVYCKYFPDSKS 299
           +DF E   KKY RL        G  VRLR  YV++    +K+    +  +YC Y P++  
Sbjct: 392 EDFREEANKKYKRLV------LGKEVRLRGAYVIKAERVEKDAEGNITTIYCTYDPET-L 444

Query: 300 GTKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVNNKDFKLLINPNSKKVIS 359
           G   +   KVKG IHW+S   AL  E RLYDRLF  P P     +DF   IN +S  VI+
Sbjct: 445 GKNPADGRKVKGVIHWVSADKALPAEIRLYDRLFTVPNPAAA--EDFASTINTDSLVVIN 502

Query: 360 AYLEPNLKLIFPKKHAQFEQ 379
            ++EP+L     ++  QFE+
Sbjct: 503 GFVEPSLASAEAEQGYQFER 522


>sp|P43831|SYQ_HAEIN Glutamine--tRNA ligase OS=Haemophilus influenzae (strain ATCC 51907
           / DSM 11121 / KW20 / Rd) GN=glnS PE=3 SV=1
          Length = 557

 Score =  343 bits (881), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 179/380 (47%), Positives = 244/380 (64%), Gaps = 20/380 (5%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           M++GEF +G   LR KI+M S  + MR+P+IYRI+  +H++T + WCIYPMYD+ H ISD
Sbjct: 169 MKNGEFAEGKASLRAKIDMASPFMVMREPVIYRIKFSSHHQTGDKWCIYPMYDFTHCISD 228

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNFIKRPFPKQYEFSRLNLTHTITSKRKLL 120
           AIE ITHSICTLEFQD+R  Y+W+L  I     I+RP P QYEFSRLNL  T+TSKRKLL
Sbjct: 229 AIERITHSICTLEFQDNRRLYDWVLENIS----IERPLPHQYEFSRLNLEGTLTSKRKLL 284

Query: 121 KLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSWINIEILEQALRDD 180
           KL+  +IVDGW+DPRMPT+ G+RRRGYTP S++ FC+RIGV+K D+ +    LE  +R+D
Sbjct: 285 KLVNDEIVDGWNDPRMPTISGLRRRGYTPASLREFCRRIGVTKQDNVVEYSALEACIRED 344

Query: 181 LDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKE-KLRYFPISKILWIER 239
           L+  APR MAV++P++++I NF      E  A L +  H    E   R  P +K L+I+R
Sbjct: 345 LNENAPRAMAVIDPVRVVIENF------ESEAVLTAPNHPNRPELGERQLPFTKELYIDR 398

Query: 240 DDFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVVEVYCKYFPDSKS 299
            DF E   K+Y RL        G  VRLR  YV++    +K+ N E+  ++C Y P++  
Sbjct: 399 ADFREEANKQYKRLV------LGKEVRLRNAYVIKAERVEKDANGEITTIFCTYDPET-L 451

Query: 300 GTKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVNNKDFKLLINPNSKKVIS 359
           G   +   KVKG IHW+S  +    E RLYDRLF  P P   +  D + ++NPNS  +  
Sbjct: 452 GKNPADGRKVKGVIHWVSAVNNHPAEFRLYDRLFTVPNPGAED--DIESVLNPNSLVIKQ 509

Query: 360 AYLEPNLKLIFPKKHAQFEQ 379
            ++E +L     +K  QFE+
Sbjct: 510 GFVEQSLANAEAEKGYQFER 529


>sp|B5XZG7|SYQ_KLEP3 Glutamine--tRNA ligase OS=Klebsiella pneumoniae (strain 342)
           GN=glnS PE=3 SV=1
          Length = 555

 Score =  343 bits (880), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 180/380 (47%), Positives = 238/380 (62%), Gaps = 19/380 (5%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           MRSG F++G   LR KI+M S  I MRDP++YRI+   H++T N WCIYPMYD+ H ISD
Sbjct: 161 MRSGGFEEGKACLRAKIDMASPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCISD 220

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNFIKRPFPKQYEFSRLNLTHTITSKRKLL 120
           A+E ITHS+CTLEFQD+R  Y+W+L+ I          P+QYEFSRLNL +T+ SKRKL 
Sbjct: 221 ALEGITHSLCTLEFQDNRRLYDWVLDNISIP-----VHPRQYEFSRLNLEYTVMSKRKLN 275

Query: 121 KLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSWINIEILEQALRDD 180
           +L+ +K V+GWDDPRMPT+ G+RRRGYT ESI+ FCKRIGV+K D+ I +  LE  +R+D
Sbjct: 276 QLVTEKHVEGWDDPRMPTISGLRRRGYTAESIREFCKRIGVTKQDNTIEMASLESCIRED 335

Query: 181 LDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKE-KLRYFPISKILWIER 239
           L+  APR MAV++P+KL+I N+   +      P     H    E   R  P S  +WI+R
Sbjct: 336 LNENAPRAMAVIDPVKLVIENYPQGESEMVAMP----NHPNKPEMGSREVPFSAEIWIDR 391

Query: 240 DDFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVVEVYCKYFPDSKS 299
            DF E   K+Y RL        G  VRLR  YV++    +K+    +  ++C Y  D+ S
Sbjct: 392 ADFREEANKQYKRLV------LGKEVRLRNAYVIKAERVEKDAEGNITTIFCTYDADTLS 445

Query: 300 GTKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVNNKDFKLLINPNSKKVIS 359
               +   KVKG IHW+S +HAL +E RLYDRLF  P P     +DF  +INP+S  +  
Sbjct: 446 KDP-ADGRKVKGVIHWVSAAHALPVEIRLYDRLFSVPNPGA--EEDFLAVINPDSLVIKQ 502

Query: 360 AYLEPNLKLIFPKKHAQFEQ 379
            Y EP+L      K  QFE+
Sbjct: 503 GYAEPSLAQAEAGKAYQFER 522


>sp|A6T6C3|SYQ_KLEP7 Glutamine--tRNA ligase OS=Klebsiella pneumoniae subsp. pneumoniae
           (strain ATCC 700721 / MGH 78578) GN=glnS PE=3 SV=1
          Length = 555

 Score =  343 bits (880), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 180/380 (47%), Positives = 237/380 (62%), Gaps = 19/380 (5%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           MRSG F++G   LR KI+M S  I MRDP++YRI+   H++T N WCIYPMYD+ H ISD
Sbjct: 161 MRSGGFEEGKACLRAKIDMASPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCISD 220

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNFIKRPFPKQYEFSRLNLTHTITSKRKLL 120
           A+E ITHS+CTLEFQD+R  Y+W+L+ I          P+QYEFSRLNL +T+ SKRKL 
Sbjct: 221 ALEGITHSLCTLEFQDNRRLYDWVLDNISIP-----VHPRQYEFSRLNLEYTVMSKRKLN 275

Query: 121 KLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSWINIEILEQALRDD 180
           +L+ +K V+GWDDPRMPT+ G+RRRGYT ESI+ FCKRIGV+K D+ I +  LE  +R+D
Sbjct: 276 QLVTEKHVEGWDDPRMPTISGLRRRGYTAESIREFCKRIGVTKQDNTIEMASLESCIRED 335

Query: 181 LDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKE-KLRYFPISKILWIER 239
           L+  APR MAV++P+KL+I N+   +      P     H    E   R  P S  +WI+R
Sbjct: 336 LNENAPRAMAVIDPVKLVIENYPQGESEMVVMP----NHPNKPEMGSREVPFSAEIWIDR 391

Query: 240 DDFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVVEVYCKYFPDSKS 299
            DF E   K+Y RL        G  VRLR  YV++    +K+    +  ++C Y  D+ S
Sbjct: 392 ADFREEANKQYKRLV------LGKEVRLRNAYVIKAERVEKDAEGNITTIFCTYDADTLS 445

Query: 300 GTKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVNNKDFKLLINPNSKKVIS 359
               +   KVKG IHW+S +HAL +E RLYDRLF  P P   +  DF  +INP S  +  
Sbjct: 446 KDP-ADGRKVKGVIHWVSAAHALPVEIRLYDRLFSVPNPGAAD--DFLAVINPESLVIKQ 502

Query: 360 AYLEPNLKLIFPKKHAQFEQ 379
            Y EP+L      K  QFE+
Sbjct: 503 GYAEPSLAQAEAGKAYQFER 522


>sp|C3LTP5|SYQ_VIBCM Glutamine--tRNA ligase OS=Vibrio cholerae serotype O1 (strain
           M66-2) GN=glnS PE=3 SV=1
          Length = 556

 Score =  343 bits (880), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 177/381 (46%), Positives = 239/381 (62%), Gaps = 21/381 (5%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           MR+GEF +G   LR KI+M S  I MRDP++YR+R   H++T + WCIYPMYD+ H ISD
Sbjct: 161 MRAGEFAEGQACLRAKIDMASSFIVMRDPVLYRVRFAEHHQTGDKWCIYPMYDFTHCISD 220

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNFIKRPFPKQYEFSRLNLTHTITSKRKLL 120
           A+E ITHSICTLEFQD+R  Y+W+L+     N      P+QYEFSRLNL +T+ SKRKL 
Sbjct: 221 ALEGITHSICTLEFQDNRRLYDWVLD-----NITIPCHPRQYEFSRLNLEYTVMSKRKLN 275

Query: 121 KLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSWINIEILEQALRDD 180
           +L+ +K+V GWDDPRMPT+ G+RRRG+TP +I+ FCKRIGV+K ++ I    LE  +RDD
Sbjct: 276 QLVTEKLVTGWDDPRMPTISGLRRRGFTPSAIREFCKRIGVTKQENMIEYSALESCIRDD 335

Query: 181 LDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKEKL--RYFPISKILWIE 238
           L+  APR MAVL+P+KL+I NF        T    +  +   K ++  R  P ++ LWIE
Sbjct: 336 LNENAPRAMAVLDPVKLVIENFAAG-----TVETLTLANHPNKPEMGDREVPFTRELWIE 390

Query: 239 RDDFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVVEVYCKYFPDSK 298
           R+DF E   KKY RL        G  VRLR  YV++    +K++   +  ++C Y P++ 
Sbjct: 391 REDFREEANKKYKRLV------LGKEVRLRGAYVIKAERIEKDEQGNITTIFCSYDPET- 443

Query: 299 SGTKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVNNKDFKLLINPNSKKVI 358
            G   +   KVKG IHW+S    +  E RLY+RLF  P P   +N  F   INP S   +
Sbjct: 444 LGKNPADGRKVKGVIHWVSAEKGVPAEFRLYERLFTVPNPGAADN--FAETINPESLVKV 501

Query: 359 SAYLEPNLKLIFPKKHAQFEQ 379
             Y+EP+L    P+   QFE+
Sbjct: 502 QGYVEPSLVEAKPEFGYQFER 522


>sp|Q9KTA6|SYQ_VIBCH Glutamine--tRNA ligase OS=Vibrio cholerae serotype O1 (strain ATCC
           39315 / El Tor Inaba N16961) GN=glnS PE=3 SV=1
          Length = 556

 Score =  343 bits (880), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 177/381 (46%), Positives = 239/381 (62%), Gaps = 21/381 (5%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           MR+GEF +G   LR KI+M S  I MRDP++YR+R   H++T + WCIYPMYD+ H ISD
Sbjct: 161 MRAGEFAEGQACLRAKIDMASSFIVMRDPVLYRVRFAEHHQTGDKWCIYPMYDFTHCISD 220

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNFIKRPFPKQYEFSRLNLTHTITSKRKLL 120
           A+E ITHSICTLEFQD+R  Y+W+L+     N      P+QYEFSRLNL +T+ SKRKL 
Sbjct: 221 ALEGITHSICTLEFQDNRRLYDWVLD-----NITIPCHPRQYEFSRLNLEYTVMSKRKLN 275

Query: 121 KLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSWINIEILEQALRDD 180
           +L+ +K+V GWDDPRMPT+ G+RRRG+TP +I+ FCKRIGV+K ++ I    LE  +RDD
Sbjct: 276 QLVTEKLVTGWDDPRMPTISGLRRRGFTPSAIREFCKRIGVTKQENMIEYSALESCIRDD 335

Query: 181 LDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKEKL--RYFPISKILWIE 238
           L+  APR MAVL+P+KL+I NF        T    +  +   K ++  R  P ++ LWIE
Sbjct: 336 LNENAPRAMAVLDPVKLVIENFAAG-----TVETLTLANHPNKPEMGDREVPFTRELWIE 390

Query: 239 RDDFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVVEVYCKYFPDSK 298
           R+DF E   KKY RL        G  VRLR  YV++    +K++   +  ++C Y P++ 
Sbjct: 391 REDFREEANKKYKRLV------LGKEVRLRGAYVIKAERIEKDEQGNITTIFCSYDPET- 443

Query: 299 SGTKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVNNKDFKLLINPNSKKVI 358
            G   +   KVKG IHW+S    +  E RLY+RLF  P P   +N  F   INP S   +
Sbjct: 444 LGKNPADGRKVKGVIHWVSAEKGVPAEFRLYERLFTVPNPGAADN--FAETINPESLVKV 501

Query: 359 SAYLEPNLKLIFPKKHAQFEQ 379
             Y+EP+L    P+   QFE+
Sbjct: 502 QGYVEPSLVEAKPEFGYQFER 522


>sp|A5F2T1|SYQ_VIBC3 Glutamine--tRNA ligase OS=Vibrio cholerae serotype O1 (strain ATCC
           39541 / Ogawa 395 / O395) GN=glnS PE=3 SV=1
          Length = 556

 Score =  343 bits (880), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 177/381 (46%), Positives = 239/381 (62%), Gaps = 21/381 (5%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           MR+GEF +G   LR KI+M S  I MRDP++YR+R   H++T + WCIYPMYD+ H ISD
Sbjct: 161 MRAGEFAEGQACLRAKIDMASSFIVMRDPVLYRVRFAEHHQTGDKWCIYPMYDFTHCISD 220

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNFIKRPFPKQYEFSRLNLTHTITSKRKLL 120
           A+E ITHSICTLEFQD+R  Y+W+L+     N      P+QYEFSRLNL +T+ SKRKL 
Sbjct: 221 ALEGITHSICTLEFQDNRRLYDWVLD-----NITIPCHPRQYEFSRLNLEYTVMSKRKLN 275

Query: 121 KLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSWINIEILEQALRDD 180
           +L+ +K+V GWDDPRMPT+ G+RRRG+TP +I+ FCKRIGV+K ++ I    LE  +RDD
Sbjct: 276 QLVTEKLVTGWDDPRMPTISGLRRRGFTPSAIREFCKRIGVTKQENMIEYSALESCIRDD 335

Query: 181 LDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKEKL--RYFPISKILWIE 238
           L+  APR MAVL+P+KL+I NF        T    +  +   K ++  R  P ++ LWIE
Sbjct: 336 LNENAPRAMAVLDPVKLVIENFAAG-----TVETLTLANHPNKPEMGDREVPFTRELWIE 390

Query: 239 RDDFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVVEVYCKYFPDSK 298
           R+DF E   KKY RL        G  VRLR  YV++    +K++   +  ++C Y P++ 
Sbjct: 391 REDFREEANKKYKRLV------LGKEVRLRGAYVIKAERIEKDEQGNITTIFCSYDPET- 443

Query: 299 SGTKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVNNKDFKLLINPNSKKVI 358
            G   +   KVKG IHW+S    +  E RLY+RLF  P P   +N  F   INP S   +
Sbjct: 444 LGKNPADGRKVKGVIHWVSAEKGVPAEFRLYERLFTVPNPGAADN--FAETINPESLVKV 501

Query: 359 SAYLEPNLKLIFPKKHAQFEQ 379
             Y+EP+L    P+   QFE+
Sbjct: 502 QGYVEPSLVEAKPEFGYQFER 522


>sp|A9MUG5|SYQ_SALPB Glutamine--tRNA ligase OS=Salmonella paratyphi B (strain ATCC
           BAA-1250 / SPB7) GN=glnS PE=3 SV=1
          Length = 555

 Score =  343 bits (879), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 179/379 (47%), Positives = 236/379 (62%), Gaps = 17/379 (4%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           MR+G F++G   LR KI+M S  I MRDP++YRI+   H++T N WCIYPMYD+ H ISD
Sbjct: 161 MRTGGFEEGKACLRAKIDMASPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCISD 220

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNFIKRPFPKQYEFSRLNLTHTITSKRKLL 120
           A+E ITHS+CTLEFQD+R  Y+W+L+     N      P+QYEFSRLNL +T+ SKRKL 
Sbjct: 221 ALEGITHSLCTLEFQDNRRLYDWVLD-----NITIPVHPRQYEFSRLNLEYTVMSKRKLN 275

Query: 121 KLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSWINIEILEQALRDD 180
            L+  K V+GWDDPRMPT+ G+RRRGYT  SI+ FCKRIGV+K D+ I +  LE  +R+D
Sbjct: 276 LLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQDNTIEMASLESCIRED 335

Query: 181 LDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKEKLRYFPISKILWIERD 240
           L+  APR MAV++P+KL+I N+   +    T P       + +   R  P S  +WI+R 
Sbjct: 336 LNENAPRAMAVIDPVKLVIENYPQGESEMVTMP---NHPNKLEMGSREVPFSGEIWIDRA 392

Query: 241 DFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVVEVYCKYFPDSKSG 300
           DF E   K+Y RL        G  VRLR  YV++    +K+    +  ++C Y  D+ S 
Sbjct: 393 DFREEANKQYKRLV------MGKEVRLRNAYVIKAERVEKDAEGNITTIFCTYDADTLSK 446

Query: 301 TKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVNNKDFKLLINPNSKKVISA 360
              +   KVKG IHW+S +HAL IE RLYDRLF  P P     +DF  +INP S  +   
Sbjct: 447 DP-ADGRKVKGVIHWVSAAHALPIEIRLYDRLFSVPNPGAA--EDFLSVINPESLVIKQG 503

Query: 361 YLEPNLKLIFPKKHAQFEQ 379
           Y EP+LK     K  QFE+
Sbjct: 504 YGEPSLKAAVAGKAFQFER 522


>sp|Q7UX42|SYQ_RHOBA Glutamine--tRNA ligase OS=Rhodopirellula baltica (strain SH1)
           GN=glnS PE=3 SV=1
          Length = 601

 Score =  342 bits (878), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 178/380 (46%), Positives = 245/380 (64%), Gaps = 17/380 (4%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           M++G+FKDG   LR KI+M S NIN+RDP++YRI HV H+RT + WCIYPMYD+AH  SD
Sbjct: 202 MKAGKFKDGEKTLRAKIDMASPNINLRDPVMYRIAHVPHHRTGDKWCIYPMYDWAHGQSD 261

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNFIKRPFPKQYEFSRLNLTHTITSKRKLL 120
           ++E IT SICTLEF+ HRP Y W    +   +      P+Q EF+RLN+T T+ SKRKLL
Sbjct: 262 SLEKITFSICTLEFEHHRPLYNWYCENLGIHH------PRQIEFARLNMTFTVMSKRKLL 315

Query: 121 KLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSWINIEILEQALRDD 180
           +L+++  V GWDDPRMPTL+G+RRRGYTPESI+ FC  IGV+K +S I++  LE ++R+ 
Sbjct: 316 QLVKENHVTGWDDPRMPTLVGLRRRGYTPESIRSFCADIGVAKFNSTIDVIRLENSVREH 375

Query: 181 LDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKEKLRYFPISKILWIERD 240
           L+  APR MAVL+PIKL I+N+ + + +E    + + +        R  P S  L+IE +
Sbjct: 376 LNSVAPRRMAVLDPIKLTITNWPEGK-VEMMNAINNPEDESAGS--REIPFSGELYIETE 432

Query: 241 DFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVVEVYCKYFPDSKSG 300
           DF E   +K+FRL        G  VRLR GY+V+C    K+ +  V EV C Y P++KSG
Sbjct: 433 DFREEAPRKFFRL------KKGGSVRLRSGYIVDCHDVVKDADGNVTEVLCTYDPETKSG 486

Query: 301 TKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVNNK-DFKLLINPNSKKVIS 359
              +S  KVKG IHW+S+ HA  +  R YDRLF    P+  ++   F   +NP+S   ++
Sbjct: 487 ED-TSGRKVKGTIHWVSREHAQKVTVRNYDRLFKVENPDASSDTGSFLDHLNPDSLTTLT 545

Query: 360 AYLEPNLKLIFPKKHAQFEQ 379
           A++EP L         QFE+
Sbjct: 546 AHVEPALAEAAVGDRVQFER 565


>sp|A6VP11|SYQ_ACTSZ Glutamine--tRNA ligase OS=Actinobacillus succinogenes (strain ATCC
           55618 / 130Z) GN=glnS PE=3 SV=1
          Length = 559

 Score =  342 bits (878), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 181/380 (47%), Positives = 239/380 (62%), Gaps = 20/380 (5%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           MR+GEF +G   LR KI+M S  + MRDP+IYR++  +H++T + WCIYPMYD+ H ISD
Sbjct: 171 MRNGEFAEGKACLRAKIDMASPFMVMRDPVIYRVKFASHHQTGDKWCIYPMYDFTHCISD 230

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNFIKRPFPKQYEFSRLNLTHTITSKRKLL 120
           AIE ITHS+CTLEFQD+R  Y+W+L  I     I+RP P QYEFSRLNL  T+TSKRKLL
Sbjct: 231 AIERITHSLCTLEFQDNRRLYDWVLEHIS----IERPLPHQYEFSRLNLEGTLTSKRKLL 286

Query: 121 KLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSWINIEILEQALRDD 180
           KL+E+  VDGWDDPRMPT+ G+RRRGYTP S++ FC+RIGV+K D+ +    LE  +RDD
Sbjct: 287 KLVEEGAVDGWDDPRMPTISGLRRRGYTPASLREFCRRIGVTKQDNVVEFSALESCIRDD 346

Query: 181 LDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKE-KLRYFPISKILWIER 239
           L+I APR MAV+NP+K+II NF      E    L    H   +E   R   ++K L+I++
Sbjct: 347 LNINAPRAMAVINPLKVIIENF------ETPETLTMPNHPNREEMGTRQVQLTKELYIDQ 400

Query: 240 DDFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVVEVYCKYFPDSKS 299
            DF E   K+Y RL        G  VRLR  Y+++    +K+    +V VYC Y P++  
Sbjct: 401 ADFREEANKQYKRLV------LGKEVRLRNAYIIKAERVEKDAEGNIVCVYCSYDPETL- 453

Query: 300 GTKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVNNKDFKLLINPNSKKVIS 359
           G   S   KVKG I W+S +  L  E R Y RLF  P P   + +D    INP S  V  
Sbjct: 454 GKNPSDGRKVKGVIQWVSATDCLPAEFRQYSRLFTMPNPG--SEEDIIAAINPQSLVVRQ 511

Query: 360 AYLEPNLKLIFPKKHAQFEQ 379
            ++E ++     +K  QFE+
Sbjct: 512 GFVERSVANALSEKAYQFER 531


>sp|Q8ZQX5|SYQ_SALTY Glutamine--tRNA ligase OS=Salmonella typhimurium (strain LT2 /
           SGSC1412 / ATCC 700720) GN=glnS PE=3 SV=3
          Length = 555

 Score =  342 bits (878), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 181/380 (47%), Positives = 236/380 (62%), Gaps = 19/380 (5%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           MR+G F++G   LR KI+M S  I MRDP++YRI+   H++T N WCIYPMYD+ H ISD
Sbjct: 161 MRTGGFEEGKACLRAKIDMASPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCISD 220

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNFIKRPFPKQYEFSRLNLTHTITSKRKLL 120
           A+E ITHS+CTLEFQD+R  Y+W+L+     N      P+QYEFSRLNL +T+ SKRKL 
Sbjct: 221 ALEGITHSLCTLEFQDNRRLYDWVLD-----NITIPVHPRQYEFSRLNLEYTVMSKRKLN 275

Query: 121 KLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSWINIEILEQALRDD 180
            L+  K V+GWDDPRMPT+ G+RRRGYT  SI+ FCKRIGV+K D+ I +  LE  +R+D
Sbjct: 276 LLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQDNTIEMASLESCIRED 335

Query: 181 LDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKE-KLRYFPISKILWIER 239
           L+  APR MAV++P+KL+I N+   +    T P     H    E   R  P S  +WI+R
Sbjct: 336 LNENAPRAMAVIDPVKLVIENYPQGESEMVTMP----NHPNKPEMGSREVPFSGEIWIDR 391

Query: 240 DDFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVVEVYCKYFPDSKS 299
            DF E   K+Y RL        G  VRLR  YV++    +K+    +  ++C Y  D+ S
Sbjct: 392 ADFREEANKQYKRLV------MGKEVRLRNAYVIKAERVEKDAEGNITTIFCTYDADTLS 445

Query: 300 GTKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVNNKDFKLLINPNSKKVIS 359
               +   KVKG IHW+S +HAL IE RLYDRLF  P P     +DF  +INP S  +  
Sbjct: 446 KDP-ADGRKVKGVIHWVSAAHALPIEIRLYDRLFSVPNPGAA--EDFLSVINPESLVIKQ 502

Query: 360 AYLEPNLKLIFPKKHAQFEQ 379
            Y EP+LK     K  QFE+
Sbjct: 503 GYGEPSLKAAVAGKAFQFER 522


>sp|B5BCC3|SYQ_SALPK Glutamine--tRNA ligase OS=Salmonella paratyphi A (strain AKU_12601)
           GN=glnS PE=3 SV=1
          Length = 555

 Score =  342 bits (878), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 181/380 (47%), Positives = 236/380 (62%), Gaps = 19/380 (5%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           MR+G F++G   LR KI+M S  I MRDP++YRI+   H++T N WCIYPMYD+ H ISD
Sbjct: 161 MRTGGFEEGKACLRAKIDMASPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCISD 220

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNFIKRPFPKQYEFSRLNLTHTITSKRKLL 120
           A+E ITHS+CTLEFQD+R  Y+W+L+     N      P+QYEFSRLNL +T+ SKRKL 
Sbjct: 221 ALEGITHSLCTLEFQDNRRLYDWVLD-----NITIPVHPRQYEFSRLNLEYTVMSKRKLN 275

Query: 121 KLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSWINIEILEQALRDD 180
            L+  K V+GWDDPRMPT+ G+RRRGYT  SI+ FCKRIGV+K D+ I +  LE  +R+D
Sbjct: 276 LLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQDNTIEMASLESCIRED 335

Query: 181 LDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKE-KLRYFPISKILWIER 239
           L+  APR MAV++P+KL+I N+   +    T P     H    E   R  P S  +WI+R
Sbjct: 336 LNENAPRAMAVIDPVKLVIENYPQGESEMVTMP----NHPNKPEMGSREVPFSGEIWIDR 391

Query: 240 DDFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVVEVYCKYFPDSKS 299
            DF E   K+Y RL        G  VRLR  YV++    +K+    +  ++C Y  D+ S
Sbjct: 392 ADFREEANKQYKRLV------MGKEVRLRNAYVIKAERVEKDAEGNITTIFCTYDADTLS 445

Query: 300 GTKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVNNKDFKLLINPNSKKVIS 359
               +   KVKG IHW+S +HAL IE RLYDRLF  P P     +DF  +INP S  +  
Sbjct: 446 KDP-ADGRKVKGVIHWVSAAHALPIEIRLYDRLFSVPNPGAA--EDFLSVINPESLVIKQ 502

Query: 360 AYLEPNLKLIFPKKHAQFEQ 379
            Y EP+LK     K  QFE+
Sbjct: 503 GYGEPSLKAAVAGKAFQFER 522


>sp|C0PWA7|SYQ_SALPC Glutamine--tRNA ligase OS=Salmonella paratyphi C (strain RKS4594)
           GN=glnS PE=3 SV=1
          Length = 555

 Score =  342 bits (878), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 181/380 (47%), Positives = 236/380 (62%), Gaps = 19/380 (5%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           MR+G F++G   LR KI+M S  I MRDP++YRI+   H++T N WCIYPMYD+ H ISD
Sbjct: 161 MRTGGFEEGKACLRAKIDMASPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCISD 220

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNFIKRPFPKQYEFSRLNLTHTITSKRKLL 120
           A+E ITHS+CTLEFQD+R  Y+W+L+     N      P+QYEFSRLNL +T+ SKRKL 
Sbjct: 221 ALEGITHSLCTLEFQDNRRLYDWVLD-----NITIPVHPRQYEFSRLNLEYTVMSKRKLN 275

Query: 121 KLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSWINIEILEQALRDD 180
            L+  K V+GWDDPRMPT+ G+RRRGYT  SI+ FCKRIGV+K D+ I +  LE  +R+D
Sbjct: 276 LLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQDNTIEMASLESCIRED 335

Query: 181 LDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKE-KLRYFPISKILWIER 239
           L+  APR MAV++P+KL+I N+   +    T P     H    E   R  P S  +WI+R
Sbjct: 336 LNENAPRAMAVIDPVKLVIENYPQGESEMVTMP----NHPNKPEMGSREVPFSGEIWIDR 391

Query: 240 DDFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVVEVYCKYFPDSKS 299
            DF E   K+Y RL        G  VRLR  YV++    +K+    +  ++C Y  D+ S
Sbjct: 392 ADFREEANKQYKRLV------MGKEVRLRNAYVIKAERVEKDAEGNITTIFCTYDADTLS 445

Query: 300 GTKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVNNKDFKLLINPNSKKVIS 359
               +   KVKG IHW+S +HAL IE RLYDRLF  P P     +DF  +INP S  +  
Sbjct: 446 KDP-ADGRKVKGVIHWVSAAHALPIEIRLYDRLFSVPNPGAA--EDFLSVINPESLVIKQ 502

Query: 360 AYLEPNLKLIFPKKHAQFEQ 379
            Y EP+LK     K  QFE+
Sbjct: 503 GYGEPSLKAAVAGKAFQFER 522


>sp|Q5PCH8|SYQ_SALPA Glutamine--tRNA ligase OS=Salmonella paratyphi A (strain ATCC 9150
           / SARB42) GN=glnS PE=3 SV=1
          Length = 555

 Score =  342 bits (878), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 181/380 (47%), Positives = 236/380 (62%), Gaps = 19/380 (5%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           MR+G F++G   LR KI+M S  I MRDP++YRI+   H++T N WCIYPMYD+ H ISD
Sbjct: 161 MRTGGFEEGKACLRAKIDMASPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCISD 220

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNFIKRPFPKQYEFSRLNLTHTITSKRKLL 120
           A+E ITHS+CTLEFQD+R  Y+W+L+     N      P+QYEFSRLNL +T+ SKRKL 
Sbjct: 221 ALEGITHSLCTLEFQDNRRLYDWVLD-----NITIPVHPRQYEFSRLNLEYTVMSKRKLN 275

Query: 121 KLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSWINIEILEQALRDD 180
            L+  K V+GWDDPRMPT+ G+RRRGYT  SI+ FCKRIGV+K D+ I +  LE  +R+D
Sbjct: 276 LLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQDNTIEMASLESCIRED 335

Query: 181 LDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKE-KLRYFPISKILWIER 239
           L+  APR MAV++P+KL+I N+   +    T P     H    E   R  P S  +WI+R
Sbjct: 336 LNENAPRAMAVIDPVKLVIENYPQGESEMVTMP----NHPNKPEMGSREVPFSGEIWIDR 391

Query: 240 DDFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVVEVYCKYFPDSKS 299
            DF E   K+Y RL        G  VRLR  YV++    +K+    +  ++C Y  D+ S
Sbjct: 392 ADFREEANKQYKRLV------MGKEVRLRNAYVIKAERVEKDAEGNITTIFCTYDADTLS 445

Query: 300 GTKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVNNKDFKLLINPNSKKVIS 359
               +   KVKG IHW+S +HAL IE RLYDRLF  P P     +DF  +INP S  +  
Sbjct: 446 KDP-ADGRKVKGVIHWVSAAHALPIEIRLYDRLFSVPNPGAA--EDFLSVINPESLVIKQ 502

Query: 360 AYLEPNLKLIFPKKHAQFEQ 379
            Y EP+LK     K  QFE+
Sbjct: 503 GYGEPSLKAAVAGKAFQFER 522


>sp|B4TB84|SYQ_SALHS Glutamine--tRNA ligase OS=Salmonella heidelberg (strain SL476)
           GN=glnS PE=3 SV=1
          Length = 555

 Score =  342 bits (878), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 181/380 (47%), Positives = 236/380 (62%), Gaps = 19/380 (5%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           MR+G F++G   LR KI+M S  I MRDP++YRI+   H++T N WCIYPMYD+ H ISD
Sbjct: 161 MRTGGFEEGKACLRAKIDMASPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCISD 220

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNFIKRPFPKQYEFSRLNLTHTITSKRKLL 120
           A+E ITHS+CTLEFQD+R  Y+W+L+     N      P+QYEFSRLNL +T+ SKRKL 
Sbjct: 221 ALEGITHSLCTLEFQDNRRLYDWVLD-----NITIPVHPRQYEFSRLNLEYTVMSKRKLN 275

Query: 121 KLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSWINIEILEQALRDD 180
            L+  K V+GWDDPRMPT+ G+RRRGYT  SI+ FCKRIGV+K D+ I +  LE  +R+D
Sbjct: 276 LLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQDNTIEMASLESCIRED 335

Query: 181 LDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKE-KLRYFPISKILWIER 239
           L+  APR MAV++P+KL+I N+   +    T P     H    E   R  P S  +WI+R
Sbjct: 336 LNENAPRAMAVIDPVKLVIENYPQGESEMVTMP----NHPNKPEMGSREVPFSGEIWIDR 391

Query: 240 DDFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVVEVYCKYFPDSKS 299
            DF E   K+Y RL        G  VRLR  YV++    +K+    +  ++C Y  D+ S
Sbjct: 392 ADFREEANKQYKRLV------MGKEVRLRNAYVIKAERVEKDAEGNITTIFCTYDADTLS 445

Query: 300 GTKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVNNKDFKLLINPNSKKVIS 359
               +   KVKG IHW+S +HAL IE RLYDRLF  P P     +DF  +INP S  +  
Sbjct: 446 KDP-ADGRKVKGVIHWVSAAHALPIEIRLYDRLFSVPNPGAA--EDFLSVINPESLVIKQ 502

Query: 360 AYLEPNLKLIFPKKHAQFEQ 379
            Y EP+LK     K  QFE+
Sbjct: 503 GYGEPSLKAAVAGKAFQFER 522


>sp|B5R651|SYQ_SALG2 Glutamine--tRNA ligase OS=Salmonella gallinarum (strain 287/91 /
           NCTC 13346) GN=glnS PE=3 SV=1
          Length = 555

 Score =  342 bits (878), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 181/380 (47%), Positives = 236/380 (62%), Gaps = 19/380 (5%)

Query: 1   MRSGEFKDGAHVLRVKINMKSKNINMRDPIIYRIRHVNHYRTNNNWCIYPMYDYAHPISD 60
           MR+G F++G   LR KI+M S  I MRDP++YRI+   H++T N WCIYPMYD+ H ISD
Sbjct: 161 MRTGGFEEGKACLRAKIDMASPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCISD 220

Query: 61  AIENITHSICTLEFQDHRPFYEWILNKIDKTNFIKRPFPKQYEFSRLNLTHTITSKRKLL 120
           A+E ITHS+CTLEFQD+R  Y+W+L+     N      P+QYEFSRLNL +T+ SKRKL 
Sbjct: 221 ALEGITHSLCTLEFQDNRRLYDWVLD-----NITIPVHPRQYEFSRLNLEYTVMSKRKLN 275

Query: 121 KLLEKKIVDGWDDPRMPTLIGMRRRGYTPESIKLFCKRIGVSKSDSWINIEILEQALRDD 180
            L+  K V+GWDDPRMPT+ G+RRRGYT  SI+ FCKRIGV+K D+ I +  LE  +R+D
Sbjct: 276 LLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQDNTIEMASLESCIRED 335

Query: 181 LDIKAPRIMAVLNPIKLIISNFLDNQEIECTAPLFSRQHTQYKE-KLRYFPISKILWIER 239
           L+  APR MAV++P+KL+I N+   +    T P     H    E   R  P S  +WI+R
Sbjct: 336 LNENAPRAMAVIDPVKLVIENYPQGESEMVTMP----NHPNKPEMGSREVPFSGEIWIDR 391

Query: 240 DDFMEIPTKKYFRLYPPIGKNSGNRVRLRYGYVVECTGFKKNKNNEVVEVYCKYFPDSKS 299
            DF E   K+Y RL        G  VRLR  YV++    +K+    +  ++C Y  D+ S
Sbjct: 392 ADFREEANKQYKRLV------MGKEVRLRNAYVIKAERVEKDAEGNITTIFCTYDADTLS 445

Query: 300 GTKLSSNYKVKGNIHWISKSHALSIEARLYDRLFIDPYPNIVNNKDFKLLINPNSKKVIS 359
               +   KVKG IHW+S +HAL IE RLYDRLF  P P     +DF  +INP S  +  
Sbjct: 446 KDP-ADGRKVKGVIHWVSAAHALPIEIRLYDRLFSVPNPGAA--EDFLSVINPESLVIKQ 502

Query: 360 AYLEPNLKLIFPKKHAQFEQ 379
            Y EP+LK     K  QFE+
Sbjct: 503 GYGEPSLKAAVAGKAFQFER 522


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.322    0.138    0.428 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 228,090,418
Number of Sequences: 539616
Number of extensions: 10064577
Number of successful extensions: 30595
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 445
Number of HSP's successfully gapped in prelim test: 786
Number of HSP's that attempted gapping in prelim test: 26854
Number of HSP's gapped (non-prelim): 2147
length of query: 582
length of database: 191,569,459
effective HSP length: 123
effective length of query: 459
effective length of database: 125,196,691
effective search space: 57465281169
effective search space used: 57465281169
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)