BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9416
(344 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1KQN|A Chain A, Crystal Structure Of NmnNAMN ADENYLYLTRANSFERASE COMPLEXED
With Nad
pdb|1KQN|B Chain B, Crystal Structure Of NmnNAMN ADENYLYLTRANSFERASE COMPLEXED
With Nad
pdb|1KQN|C Chain C, Crystal Structure Of NmnNAMN ADENYLYLTRANSFERASE COMPLEXED
With Nad
pdb|1KQN|D Chain D, Crystal Structure Of NmnNAMN ADENYLYLTRANSFERASE COMPLEXED
With Nad
pdb|1KQN|E Chain E, Crystal Structure Of NmnNAMN ADENYLYLTRANSFERASE COMPLEXED
With Nad
pdb|1KQN|F Chain F, Crystal Structure Of NmnNAMN ADENYLYLTRANSFERASE COMPLEXED
With Nad
pdb|1KQO|A Chain A, Crystal Structure Of NmnNAMN ADENYLYLTRANSFERASE COMPLEXED
With Deamido-Nad
pdb|1KQO|B Chain B, Crystal Structure Of NmnNAMN ADENYLYLTRANSFERASE COMPLEXED
With Deamido-Nad
pdb|1KQO|C Chain C, Crystal Structure Of NmnNAMN ADENYLYLTRANSFERASE COMPLEXED
With Deamido-Nad
pdb|1KQO|D Chain D, Crystal Structure Of NmnNAMN ADENYLYLTRANSFERASE COMPLEXED
With Deamido-Nad
pdb|1KQO|E Chain E, Crystal Structure Of NmnNAMN ADENYLYLTRANSFERASE COMPLEXED
With Deamido-Nad
pdb|1KQO|F Chain F, Crystal Structure Of NmnNAMN ADENYLYLTRANSFERASE COMPLEXED
With Deamido-Nad
pdb|1KR2|A Chain A, Crystal Structure Of Human NmnNAMN ADENYLYL TRANSFERASE
Complexed With Tiazofurin Adenine Dinucleotide (Tad)
pdb|1KR2|B Chain B, Crystal Structure Of Human NmnNAMN ADENYLYL TRANSFERASE
Complexed With Tiazofurin Adenine Dinucleotide (Tad)
pdb|1KR2|C Chain C, Crystal Structure Of Human NmnNAMN ADENYLYL TRANSFERASE
Complexed With Tiazofurin Adenine Dinucleotide (Tad)
pdb|1KR2|D Chain D, Crystal Structure Of Human NmnNAMN ADENYLYL TRANSFERASE
Complexed With Tiazofurin Adenine Dinucleotide (Tad)
pdb|1KR2|E Chain E, Crystal Structure Of Human NmnNAMN ADENYLYL TRANSFERASE
Complexed With Tiazofurin Adenine Dinucleotide (Tad)
pdb|1KR2|F Chain F, Crystal Structure Of Human NmnNAMN ADENYLYL TRANSFERASE
Complexed With Tiazofurin Adenine Dinucleotide (Tad)
Length = 279
Score = 226 bits (577), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 111/253 (43%), Positives = 161/253 (63%), Gaps = 14/253 (5%)
Query: 2 SSAAIKTVLFVCGSYNPPTNMHLRMFELARDHLFKLG-HTVCGGIMSPVHDKYGKKDLVS 60
+S + VL CGS+NP TNMHLR+FELA+D++ G +TV GI+SPV D Y KK L+
Sbjct: 3 NSEKTEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLIP 62
Query: 61 SKHRCEMVRLALEDSTWIKLSEWEAQQSEWTRTRVSLDHHEDEL-----NQQLDAQCTNK 115
+ HR M LA ++S W+++ WE+ Q EW T L HH+++L + Q ++ +
Sbjct: 63 AYHRVIMAELATKNSKWVEVDTWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTLER 122
Query: 116 TDVKRARHDQHNGSPRRKIQ--------VMFLCGVDVLESMAVPNLWSADDINHIAGHHG 167
KR + + S ++ ++ V LCG D+LES AVPNLW ++DI I ++G
Sbjct: 123 PGRKRKWTETQDSSQKKSLEPKTKAVPKVKLLCGADLLESFAVPNLWKSEDITQIVANYG 182
Query: 168 IVVITRGDTNPAKFIYQHDILSKHMNKIIIVNEWIKNEISSTYLRRALRRGDSIKYLIND 227
++ +TR + KFIY+ D+L KH + I +VNEWI N+ISST +RRALRRG SI+YL+ D
Sbjct: 183 LICVTRAGNDAQKFIYESDVLWKHRSNIHVVNEWIANDISSTKIRRALRRGQSIRYLVPD 242
Query: 228 KVEQYIYQHGLYS 240
V++YI +H LYS
Sbjct: 243 LVQEYIEKHNLYS 255
>pdb|1KKU|A Chain A, Crystal Structure Of Nuclear Human Nicotinamide
Mononucleotide Adenylyltransferase
Length = 279
Score = 225 bits (573), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 110/253 (43%), Positives = 160/253 (63%), Gaps = 14/253 (5%)
Query: 2 SSAAIKTVLFVCGSYNPPTNMHLRMFELARDHLFKLG-HTVCGGIMSPVHDKYGKKDLVS 60
+S + VL CGS+NP TNMHLR+FELA+D++ G +TV GI+SPV D Y KK L+
Sbjct: 3 NSEKTEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLIP 62
Query: 61 SKHRCEMVRLALEDSTWIKLSEWEAQQSEWTRTRVSLDHHEDEL-----NQQLDAQCTNK 115
+ HR M LA ++S W+++ WE+ Q EW T L HH+++L + Q ++ +
Sbjct: 63 AYHRVIMAELATKNSKWVEVDTWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTLER 122
Query: 116 TDVKRARHDQHNGSPRRKIQ--------VMFLCGVDVLESMAVPNLWSADDINHIAGHHG 167
KR + + S ++ ++ V LCG D+LES AVPNLW ++DI I ++G
Sbjct: 123 PGRKRKWTETQDSSQKKSLEPKTKAVPKVKLLCGADLLESFAVPNLWKSEDITQIVANYG 182
Query: 168 IVVITRGDTNPAKFIYQHDILSKHMNKIIIVNEWIKNEISSTYLRRALRRGDSIKYLIND 227
++ +TR + KFIY+ D+L KH + I +VNEW N+ISST +RRALRRG SI+YL+ D
Sbjct: 183 LICVTRAGNDAQKFIYESDVLWKHRSNIHVVNEWFANDISSTKIRRALRRGQSIRYLVPD 242
Query: 228 KVEQYIYQHGLYS 240
V++YI +H LYS
Sbjct: 243 LVQEYIEKHNLYS 255
>pdb|1GZU|A Chain A, Crystal Structure Of Human Nicotinamide Mononucleotide
Adenylyltransferase In Complex With Nmn
pdb|1GZU|B Chain B, Crystal Structure Of Human Nicotinamide Mononucleotide
Adenylyltransferase In Complex With Nmn
pdb|1GZU|C Chain C, Crystal Structure Of Human Nicotinamide Mononucleotide
Adenylyltransferase In Complex With Nmn
Length = 290
Score = 220 bits (560), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 109/253 (43%), Positives = 158/253 (62%), Gaps = 14/253 (5%)
Query: 2 SSAAIKTVLFVCGSYNPPTNMHLRMFELARDHLFKLG-HTVCGGIMSPVHDKYGKKDLVS 60
+S + VL CGS+NP TN HLR+FELA+D+ G +TV GI+SPV D Y KK L+
Sbjct: 14 NSEKTEVVLLACGSFNPITNXHLRLFELAKDYXNGTGRYTVVKGIISPVGDAYKKKGLIP 73
Query: 61 SKHRCEMVRLALEDSTWIKLSEWEAQQSEWTRTRVSLDHHEDEL-----NQQLDAQCTNK 115
+ HR LA ++S W+++ WE+ Q EW T L HH+++L + Q ++ +
Sbjct: 74 AYHRVIXAELATKNSKWVEVDTWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTLER 133
Query: 116 TDVKRARHDQHNGSPRRKIQ--------VMFLCGVDVLESMAVPNLWSADDINHIAGHHG 167
KR + + S ++ ++ V LCG D+LES AVPNLW ++DI I ++G
Sbjct: 134 PGRKRKWTETQDSSQKKSLEPKTKAVPKVKLLCGADLLESFAVPNLWKSEDITQIVANYG 193
Query: 168 IVVITRGDTNPAKFIYQHDILSKHMNKIIIVNEWIKNEISSTYLRRALRRGDSIKYLIND 227
++ +TR + KFIY+ D+L KH + I +VNEWI N+ISST +RRALRRG SI+YL+ D
Sbjct: 194 LICVTRAGNDAQKFIYESDVLWKHRSNIHVVNEWIANDISSTKIRRALRRGQSIRYLVPD 253
Query: 228 KVEQYIYQHGLYS 240
V++YI +H LYS
Sbjct: 254 LVQEYIEKHNLYS 266
>pdb|1NUP|A Chain A, Crystal Structure Of Human Cytosolic NmnNAMN
ADENYLYLTRANSFERASE Complex With Nmn
pdb|1NUP|B Chain B, Crystal Structure Of Human Cytosolic NmnNAMN
ADENYLYLTRANSFERASE Complex With Nmn
pdb|1NUQ|A Chain A, Crystal Structure Of Human Cytosolic NmnNAMN
ADENYLYLTRANSFERASE Complexed With Naad
pdb|1NUQ|B Chain B, Crystal Structure Of Human Cytosolic NmnNAMN
ADENYLYLTRANSFERASE Complexed With Naad
pdb|1NUR|A Chain A, Crystal Structure Of Human Cytosolic NmnNAMN
ADENYLYLTRANSFERASE
pdb|1NUR|B Chain B, Crystal Structure Of Human Cytosolic NmnNAMN
ADENYLYLTRANSFERASE
pdb|1NUS|A Chain A, Crystal Structure Of Human Cytosolic NmnNAMN
ADENYLYLTRANSFERASE Complexed With Atp Analog And Nmn
pdb|1NUS|B Chain B, Crystal Structure Of Human Cytosolic NmnNAMN
ADENYLYLTRANSFERASE Complexed With Atp Analog And Nmn
pdb|1NUT|A Chain A, Crystal Structure Of Human Cytosolic NmnNAMN
ADENYLYLTRANSFERASE Complexed With Atp Analog
pdb|1NUT|B Chain B, Crystal Structure Of Human Cytosolic NmnNAMN
ADENYLYLTRANSFERASE Complexed With Atp Analog
pdb|1NUU|A Chain A, Crystal Structure Of Human Cytosolic NmnNAMN
ADENYLYLTRANSFERASE Complexed With Nad
pdb|1NUU|B Chain B, Crystal Structure Of Human Cytosolic NmnNAMN
ADENYLYLTRANSFERASE Complexed With Nad
Length = 252
Score = 201 bits (511), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 106/236 (44%), Positives = 140/236 (59%), Gaps = 7/236 (2%)
Query: 6 IKTVLFVCGSYNPPTNMHLRMFELARDHLFKLG-HTVCGGIMSPVHDKYGKKDLVSSKHR 64
I VL CGS+NP TNMHLRMFE+ARDHL + G + V GI+SPV+D YGKKDL +S HR
Sbjct: 5 IPVVLLACGSFNPITNMHLRMFEVARDHLHQTGMYQVIQGIISPVNDTYGKKDLAASHHR 64
Query: 65 CEMVRLALEDSTWIKLSEWEAQQSEWTRTRVSLDHHEDELNQQLDAQCTNKTDVKRARHD 124
M RLAL+ S WI++ WE++Q++W T L HH +L + D +A
Sbjct: 65 VAMARLALQTSDWIRVDPWESEQAQWMETVKVLRHHHSKLLR--SPPQMEGPDHGKALFS 122
Query: 125 QHNGSPRRKIQVMFLCGVDVLESMAVPNLWSADDINHIAGHHGIVVITRGDTNPAKFIYQ 184
P K+ LCG DVL++ PNLW I I G+V + R +P +I +
Sbjct: 123 TPAAVPELKL----LCGADVLKTFQTPNLWKDAHIQEIVEKFGLVCVGRVSHDPKGYIAE 178
Query: 185 HDILSKHMNKIIIVNEWIKNEISSTYLRRALRRGDSIKYLINDKVEQYIYQHGLYS 240
IL H + I + E ++NEIS+TY+RRAL +G S+KYLI D V YI HGLY+
Sbjct: 179 SPILRMHQHNIHLAKEPVQNEISATYIRRALGQGQSVKYLIPDAVITYIKDHGLYT 234
>pdb|1KAM|A Chain A, Structure Of Bacillus Subtilis Nicotinic Acid
Mononucleotide Adenylyl Transferase
pdb|1KAM|B Chain B, Structure Of Bacillus Subtilis Nicotinic Acid
Mononucleotide Adenylyl Transferase
pdb|1KAM|C Chain C, Structure Of Bacillus Subtilis Nicotinic Acid
Mononucleotide Adenylyl Transferase
pdb|1KAM|D Chain D, Structure Of Bacillus Subtilis Nicotinic Acid
Mononucleotide Adenylyl Transferase
pdb|1KAQ|A Chain A, Structure Of Bacillus Subtilis Nicotinic Acid
Mononucleotide Adenylyl Transferase
pdb|1KAQ|B Chain B, Structure Of Bacillus Subtilis Nicotinic Acid
Mononucleotide Adenylyl Transferase
pdb|1KAQ|C Chain C, Structure Of Bacillus Subtilis Nicotinic Acid
Mononucleotide Adenylyl Transferase
pdb|1KAQ|D Chain D, Structure Of Bacillus Subtilis Nicotinic Acid
Mononucleotide Adenylyl Transferase
pdb|1KAQ|E Chain E, Structure Of Bacillus Subtilis Nicotinic Acid
Mononucleotide Adenylyl Transferase
pdb|1KAQ|F Chain F, Structure Of Bacillus Subtilis Nicotinic Acid
Mononucleotide Adenylyl Transferase
Length = 194
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 101/241 (41%), Gaps = 52/241 (21%)
Query: 1 MSSAAIKTVLFVCGSYNPPTNMHLRMFELARDHLFKLGHTVCGGIMSPVHDKYGKKDLVS 60
M + K +F G+++PP N HL M A + L++ G + + + +D
Sbjct: 2 MPGGSKKIGIF-GGTFDPPHNGHLLM---ANEVLYQAGLDEIWFMPNQIPPHKQNEDYTD 57
Query: 61 SKHRCEMVRLALEDSTWIKLS--EWEAQQSEWTRTRVSLDHHEDELNQQLDAQCTNKTDV 118
S HR EM++LA++ + KL E E + +T VSL L Q
Sbjct: 58 SFHRVEMLKLAIQSNPSFKLELVEMEREGPSYTFDTVSL------LKQ------------ 99
Query: 119 KRARHDQHNGSPRRKIQVMFLCGVDVLESMAVPNLWSADDINHIAGHHGIVVITRGDTNP 178
R +D Q+ F+ G D++E + P + D++ ++ G+ P
Sbjct: 100 -RYPND----------QLFFIIGADMIEYL--PKWYKLDELLNLIQFIGVKRPGFHVETP 146
Query: 179 AKFIYQHDILSKHMNKIIIVNEWIKNEISSTYLRRALRRGDSIKYLINDKVEQYIYQHGL 238
++ V E+ E+SST +R + YLI DKV++Y+ ++GL
Sbjct: 147 YPLLFAD------------VPEF---EVSSTMIRERFKSKKPTDYLIPDKVKKYVEENGL 191
Query: 239 Y 239
Y
Sbjct: 192 Y 192
>pdb|2H2A|A Chain A, Crystal Structure Of Nicotinic Acid Mononucleotide
Adenylyltransferase From Staphylococcus Aureus: Product
Bound Form 2
pdb|2H2A|B Chain B, Crystal Structure Of Nicotinic Acid Mononucleotide
Adenylyltransferase From Staphylococcus Aureus: Product
Bound Form 2
Length = 189
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 96/239 (40%), Gaps = 57/239 (23%)
Query: 6 IKTVLFVCGSYNPPTNMHL----RMF-ELARDHLFKLGHTVCGGIMSPVHDKYGKKDLVS 60
+K ++ G +NP H+ +F EL D + L MSP+ + D +
Sbjct: 1 MKKIVLYGGQFNPIHTAHMIVASEVFHELQPDEFYFLP-----SFMSPLKKHH---DFID 52
Query: 61 SKHRCEMVRLALEDSTWIKLSEWEAQQSEWTRTRVSLDHHEDELNQQLDAQCTNKTDVKR 120
+HR M+++ +++ + + + E ++ + T D +
Sbjct: 53 VQHRLTMIQMIIDELGFGDIXDDEIKRGGQSYTY----------------------DTIK 90
Query: 121 ARHDQHNGSPRRKIQVMFLCGVDVLESMAVPNLWSADDINHIAGHHGIVVITRGDTNPAK 180
A +QH S ++ F+ G D + W I ++ VV+ R D N
Sbjct: 91 AFKEQHKDS-----ELYFVIGTDQYNQL---EKWYQ--IEYLKEMVTFVVVNR-DKN--- 136
Query: 181 FIYQHDILSKHMNKIIIVNEWIKNEISSTYLRRALRRGDSIKYLINDKVEQYIYQHGLY 239
S+++ +I + + +ISST +R+ + G SI+ L+ VE YI GLY
Sbjct: 137 --------SQNVENAMIAIQIPRVDISSTMIRQRVSEGKSIQVLVPKSVENYIKGEGLY 187
>pdb|2H29|A Chain A, Crystal Structure Of Nicotinic Acid Mononucleotide
Adenylyltransferase From Staphylococcus Aureus: Product
Bound Form 1
pdb|2H29|B Chain B, Crystal Structure Of Nicotinic Acid Mononucleotide
Adenylyltransferase From Staphylococcus Aureus: Product
Bound Form 1
Length = 189
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 96/239 (40%), Gaps = 57/239 (23%)
Query: 6 IKTVLFVCGSYNPPTNMHL----RMF-ELARDHLFKLGHTVCGGIMSPVHDKYGKKDLVS 60
+K ++ G +NP H+ +F EL D + L MSP+ + D +
Sbjct: 1 MKKIVLYGGQFNPIHTAHMIVASEVFHELQPDEFYFLP-----SFMSPLKKHH---DFID 52
Query: 61 SKHRCEMVRLALEDSTWIKLSEWEAQQSEWTRTRVSLDHHEDELNQQLDAQCTNKTDVKR 120
+HR M+++ +++ + + + E ++ + T D +
Sbjct: 53 VQHRLTMIQMIIDELGFGDICDDEIKRGGQSYTY----------------------DTIK 90
Query: 121 ARHDQHNGSPRRKIQVMFLCGVDVLESMAVPNLWSADDINHIAGHHGIVVITRGDTNPAK 180
A +QH S ++ F+ G D + W I ++ VV+ R D N
Sbjct: 91 AFKEQHKDS-----ELYFVIGTDQYNQL---EKWYQ--IEYLKEMVTFVVVNR-DKN--- 136
Query: 181 FIYQHDILSKHMNKIIIVNEWIKNEISSTYLRRALRRGDSIKYLINDKVEQYIYQHGLY 239
S+++ +I + + +ISST +R+ + G SI+ L+ VE YI GLY
Sbjct: 137 --------SQNVENAMIAIQIPRVDISSTMIRQRVSEGKSIQVLVPKSVENYIKGEGLY 187
>pdb|2FIW|A Chain A, Crystal Structure Of The Gcn5-related N-acetyltransferase:
Aminotransferase, Class-ii From Rhodopseudomonas
Palustris
Length = 172
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 157 DDINHIAGHHGIVVIT-RGDTNPAKFIYQHDILSKHMNKIIIVNEWIKNEISSTYLRRAL 215
D + +AG G +++T N A+F + ++K N + I EW+ N + L +
Sbjct: 105 DALEKLAGARGALILTVDASDNAAEFFAKRGYVAKQRNTVSINGEWLANTTXTKSLADSA 164
Query: 216 RRGDS 220
G S
Sbjct: 165 APGAS 169
>pdb|1K4K|A Chain A, Crystal Structure Of E. Coli Nicotinic Acid Mononucleotide
Adenylyltransferase
pdb|1K4K|B Chain B, Crystal Structure Of E. Coli Nicotinic Acid Mononucleotide
Adenylyltransferase
pdb|1K4K|C Chain C, Crystal Structure Of E. Coli Nicotinic Acid Mononucleotide
Adenylyltransferase
pdb|1K4K|D Chain D, Crystal Structure Of E. Coli Nicotinic Acid Mononucleotide
Adenylyltransferase
pdb|1K4M|A Chain A, Crystal Structure Of E.Coli Nicotinic Acid Mononucleotide
Adenylyltransferase Complexed To Deamido-Nad
pdb|1K4M|B Chain B, Crystal Structure Of E.Coli Nicotinic Acid Mononucleotide
Adenylyltransferase Complexed To Deamido-Nad
pdb|1K4M|C Chain C, Crystal Structure Of E.Coli Nicotinic Acid Mononucleotide
Adenylyltransferase Complexed To Deamido-Nad
Length = 213
Score = 31.6 bits (70), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 206 ISSTYLRRALRRGDSIKYLINDKVEQYIYQHGLY 239
IS+T +R L+ G+S + L+ + V YI Q GLY
Sbjct: 179 ISATIIRERLQNGESCEDLLPEPVLTYINQQGLY 212
>pdb|3DV2|A Chain A, Crystal Structure Of Nicotinic Acid Mononucleotide
Adenylyltransferase From Bacillus Anthracis
pdb|3DV2|B Chain B, Crystal Structure Of Nicotinic Acid Mononucleotide
Adenylyltransferase From Bacillus Anthracis
pdb|3DV2|C Chain C, Crystal Structure Of Nicotinic Acid Mononucleotide
Adenylyltransferase From Bacillus Anthracis
pdb|3DV2|D Chain D, Crystal Structure Of Nicotinic Acid Mononucleotide
Adenylyltransferase From Bacillus Anthracis
Length = 201
Score = 31.2 bits (69), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 206 ISSTYLRRALRRGDSIKYLINDKVEQYIYQHGLY 239
+SS+ LR + + KYL+ +KV+ YI ++GLY
Sbjct: 154 VSSSLLRERYKEKKTCKYLLPEKVQVYIERNGLY 187
>pdb|3HFJ|A Chain A, Bacillus Anthracis Nicotinate Mononucleotide
Adenylytransferase (Nadd) In Complex With Inhibitor Cid
3289443
pdb|3HFJ|B Chain B, Bacillus Anthracis Nicotinate Mononucleotide
Adenylytransferase (Nadd) In Complex With Inhibitor Cid
3289443
pdb|3MLA|A Chain A, Banadd In Complex With Inhibitor 1_02
pdb|3MLA|B Chain B, Banadd In Complex With Inhibitor 1_02
pdb|3MLB|A Chain A, Banadd In Complex With Inhibitor 1_02_1
pdb|3MLB|B Chain B, Banadd In Complex With Inhibitor 1_02_1
pdb|3MMX|A Chain A, Bacillus Anthracis Nadd (Banadd) In Complex With Compound
1_02_3
pdb|3MMX|B Chain B, Bacillus Anthracis Nadd (Banadd) In Complex With Compound
1_02_3
pdb|3MMX|C Chain C, Bacillus Anthracis Nadd (Banadd) In Complex With Compound
1_02_3
pdb|3MMX|D Chain D, Bacillus Anthracis Nadd (Banadd) In Complex With Compound
1_02_3
pdb|3MMX|E Chain E, Bacillus Anthracis Nadd (Banadd) In Complex With Compound
1_02_3
pdb|3MMX|F Chain F, Bacillus Anthracis Nadd (Banadd) In Complex With Compound
1_02_3
pdb|3MMX|G Chain G, Bacillus Anthracis Nadd (Banadd) In Complex With Compound
1_02_3
pdb|3MMX|H Chain H, Bacillus Anthracis Nadd (Banadd) In Complex With Compound
1_02_3
Length = 191
Score = 31.2 bits (69), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 206 ISSTYLRRALRRGDSIKYLINDKVEQYIYQHGLY 239
+SS+ LR + + KYL+ +KV+ YI ++GLY
Sbjct: 156 VSSSLLRERYKEKKTCKYLLPEKVQVYIERNGLY 189
>pdb|2QTR|A Chain A, Crystal Structure Of Nicotinate Mononucleotide
Adenylyltransferase
pdb|2QTR|B Chain B, Crystal Structure Of Nicotinate Mononucleotide
Adenylyltransferase
pdb|2QTR|C Chain C, Crystal Structure Of Nicotinate Mononucleotide
Adenylyltransferase
Length = 189
Score = 31.2 bits (69), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 206 ISSTYLRRALRRGDSIKYLINDKVEQYIYQHGLY 239
+SS+ LR + + KYL+ +KV+ YI ++GLY
Sbjct: 154 VSSSLLRERYKEKKTCKYLLPEKVQVYIERNGLY 187
>pdb|2QTM|A Chain A, Crystal Structure Of Nicotinate Mononucleotide
Adenylyltransferase
pdb|2QTM|B Chain B, Crystal Structure Of Nicotinate Mononucleotide
Adenylyltransferase
pdb|2QTN|A Chain A, Crystal Structure Of Nicotinate Mononucleotide
Adenylyltransferase
pdb|2QTN|B Chain B, Crystal Structure Of Nicotinate Mononucleotide
Adenylyltransferase
pdb|3E27|A Chain A, Nicotinic Acid Mononucleotide (Namn) Adenylyltransferase
From Bacillus Anthracis: Product Complex
pdb|3E27|B Chain B, Nicotinic Acid Mononucleotide (Namn) Adenylyltransferase
From Bacillus Anthracis: Product Complex
pdb|3E27|C Chain C, Nicotinic Acid Mononucleotide (Namn) Adenylyltransferase
From Bacillus Anthracis: Product Complex
pdb|3E27|D Chain D, Nicotinic Acid Mononucleotide (Namn) Adenylyltransferase
From Bacillus Anthracis: Product Complex
Length = 189
Score = 31.2 bits (69), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 206 ISSTYLRRALRRGDSIKYLINDKVEQYIYQHGLY 239
+SS+ LR + + KYL+ +KV+ YI ++GLY
Sbjct: 154 VSSSLLRERYKEKKTCKYLLPEKVQVYIERNGLY 187
>pdb|1YWU|A Chain A, Solution Nmr Structure Of Pseudomonas Aeruginosa Protein
Pa4608. Northeast Structural Genomics Target Pat7
Length = 149
Score = 28.5 bits (62), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 127 NGSPRRKIQVMFLCGVDVLESMAVPNLWSADDI 159
NG P+R + G+DVL M + W+ D +
Sbjct: 72 NGDPQRPFEARLYLGLDVLIRMEISLAWARDGL 104
>pdb|2L74|A Chain A, Solution Structure Of The Pilz Domain Protein Pa4608
Complex With C- Di-Gmp Identifies Charge Clustering As
Molecular Readout
Length = 145
Score = 28.1 bits (61), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 127 NGSPRRKIQVMFLCGVDVLESMAVPNLWSADDI 159
NG P+R + G+DVL M + W+ D +
Sbjct: 70 NGDPQRPFEARLYLGLDVLIRMEISLAWARDGL 102
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.131 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,985,317
Number of Sequences: 62578
Number of extensions: 369169
Number of successful extensions: 883
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 846
Number of HSP's gapped (non-prelim): 36
length of query: 344
length of database: 14,973,337
effective HSP length: 100
effective length of query: 244
effective length of database: 8,715,537
effective search space: 2126591028
effective search space used: 2126591028
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)