RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy9417
         (161 letters)



>d1szaa_ a.118.9.4 (A:) PCF11 protein {Baker's yeast (Saccharomyces
           cerevisiae) [TaxId: 4932]}
          Length = 144

 Score = 57.8 bits (139), Expect = 6e-12
 Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 10/106 (9%)

Query: 56  VIGEWNQELLSINSTKPPISKAKITGIVKLALKATHYYKYVVQSVEKFIWKCKSQYKLPG 115
           ++ ++N  L  +     PI    IT + KLA +     +Y V ++E  I KC  + KL  
Sbjct: 8   IVKDFNSILEELTFNSRPI----ITTLTKLAEENISCAQYFVDAIESRIEKCMPKQKLYA 63

Query: 116 LYVIDAIIHQARLQFKYKDVYAPRFARNLYRTFGYVFQCPDEDRKK 161
            Y +D+I             Y   F+RNL+  +   +   D   + 
Sbjct: 64  FYALDSICKNVG------SPYTIYFSRNLFNLYKRTYLLVDNTTRT 103



 Score = 35.4 bits (81), Expect = 8e-04
 Identities = 15/46 (32%), Positives = 23/46 (50%)

Query: 12 ISKAKITGIVKLALKATHYYKYVVQSVEKFIWKCKSQYKLPGLYVI 57
           S+  IT + KLA +     +Y V ++E  I KC  + KL   Y +
Sbjct: 22 NSRPIITTLTKLAEENISCAQYFVDAIESRIEKCMPKQKLYAFYAL 67


>d1ewka_ c.93.1.1 (A:) Metabotropic glutamate receptor subtype 1
           {Rat (Rattus norvegicus) [TaxId: 10116]}
          Length = 477

 Score = 26.8 bits (58), Expect = 1.4
 Identities = 5/19 (26%), Positives = 11/19 (57%)

Query: 53  GLYVIGEWNQELLSINSTK 71
               +G W++ +L+I+  K
Sbjct: 458 DYVHVGTWHEGVLNIDDYK 476


>d1m4ia_ d.108.1.1 (A:) Aminoglycoside 2'-N-acetyltransferase
           {Mycobacterium tuberculosis [TaxId: 1773]}
          Length = 181

 Score = 25.2 bits (54), Expect = 3.9
 Identities = 8/34 (23%), Positives = 18/34 (52%)

Query: 118 VIDAIIHQARLQFKYKDVYAPRFARNLYRTFGYV 151
           ++DA+    R  ++   + +   AR LY + G++
Sbjct: 99  LLDAVEQVMRGAYQLGALSSSARARRLYASRGWL 132


>d3bmva2 b.3.1.1 (A:579-683) Cyclodextrin glycosyltransferase,
           C-terminal domain {Thermoanaerobacterium [TaxId: 28895]}
          Length = 105

 Score = 24.5 bits (53), Expect = 4.4
 Identities = 6/50 (12%), Positives = 16/50 (32%), Gaps = 1/50 (2%)

Query: 57  IGEWNQEL-LSINSTKPPISKAKITGIVKLALKATHYYKYVVQSVEKFIW 105
           +G W+    +     +           V +    T  +K++ ++     W
Sbjct: 32  LGNWDTSKAIGPMFNQVVYQYPTWYYDVSVPAGTTIQFKFIKKNGNTITW 81


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.322    0.137    0.416 

Gapped
Lambda     K      H
   0.267   0.0609    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 613,897
Number of extensions: 26834
Number of successful extensions: 45
Number of sequences better than 10.0: 1
Number of HSP's gapped: 45
Number of HSP's successfully gapped: 11
Length of query: 161
Length of database: 2,407,596
Length adjustment: 78
Effective length of query: 83
Effective length of database: 1,336,656
Effective search space: 110942448
Effective search space used: 110942448
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 49 (22.9 bits)