RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy9419
(739 letters)
>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein
1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 42
Score = 40.5 bits (95), Expect = 1e-05
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 66 EDVDECAESRHLCGPGAVCINHPGSYTCQCPPNSSGD 102
+DVDEC+ + C CIN GS+ CQC +G
Sbjct: 1 QDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGP 37
Score = 33.6 bits (77), Expect = 0.004
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 569 DIDEC-WSSNTCGSNAVCINTPGSYDCRCKEGNAGN 603
D+DEC +N C CINT GS++C+C +G G
Sbjct: 2 DVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGP 37
Score = 33.2 bits (76), Expect = 0.006
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 187 DVDECLGVS-PCASSALCVNEKGGFKCVCPKGTTGD 221
DVDEC + PC + C+N G F+C C +G TG
Sbjct: 2 DVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGP 37
Score = 33.2 bits (76), Expect = 0.006
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 246 DVDECLGVS-PCASSALCVNEKGGFKCVCPKGTTGD 280
DVDEC + PC + C+N G F+C C +G TG
Sbjct: 2 DVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGP 37
Score = 29.7 bits (67), Expect = 0.10
Identities = 17/37 (45%), Positives = 19/37 (51%)
Query: 505 QDRGSCDSGAGLCGPGAQCLETGGSVECQCPAGYKGN 541
QD C GA C +C+ T GS ECQC GY G
Sbjct: 1 QDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGP 37
>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 39.0 bits (91), Expect = 5e-05
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 567 CVDIDECWSSNTCGSNAVCINTPGSYDCRCKEGNAGN 603
VD+DEC + CINT GSY C C G
Sbjct: 2 AVDMDEC-KEPDVCKHGQCINTDGSYRCECPFGYILA 37
Score = 34.4 bits (79), Expect = 0.002
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 65 CEDVDECAESRHLCGPGAVCINHPGSYTCQCPPNSSGD 102
D+DEC E CIN GSY C+CP
Sbjct: 2 AVDMDECKEPDVCKH--GQCINTDGSYRCECPFGYILA 37
Score = 33.6 bits (77), Expect = 0.004
Identities = 11/40 (27%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Query: 185 CLDVDECLGVSPCASSALCVNEKGGFKCVCPKGTTGDPYT 224
+D+DEC C+N G ++C CP G
Sbjct: 2 AVDMDECK-EPDVCKHGQCINTDGSYRCECPFGYILAGNE 40
Score = 33.6 bits (77), Expect = 0.004
Identities = 11/40 (27%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Query: 244 CLDVDECLGVSPCASSALCVNEKGGFKCVCPKGTTGDPYT 283
+D+DEC C+N G ++C CP G
Sbjct: 2 AVDMDECK-EPDVCKHGQCINTDGSYRCECPFGYILAGNE 40
>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 44
Score = 38.7 bits (90), Expect = 6e-05
Identities = 15/36 (41%), Positives = 19/36 (52%)
Query: 569 DIDECWSSNTCGSNAVCINTPGSYDCRCKEGNAGNP 604
DIDEC S C+NTPG ++C+C EG
Sbjct: 2 DIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGF 37
Score = 37.5 bits (87), Expect = 2e-04
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 67 DVDECAESRHLCGPGAVCINHPGSYTCQCPPNSSGDPLLG 106
D+DEC S LCG G C+N PG + C+C ++
Sbjct: 2 DIDECRISPDLCGRG-QCVNTPGDFECKCDEGYESGFMMM 40
Score = 33.6 bits (77), Expect = 0.004
Identities = 12/38 (31%), Positives = 15/38 (39%)
Query: 187 DVDECLGVSPCASSALCVNEKGGFKCVCPKGTTGDPYT 224
D+DEC CVN G F+C C +G
Sbjct: 2 DIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMM 39
Score = 33.6 bits (77), Expect = 0.004
Identities = 12/38 (31%), Positives = 15/38 (39%)
Query: 246 DVDECLGVSPCASSALCVNEKGGFKCVCPKGTTGDPYT 283
D+DEC CVN G F+C C +G
Sbjct: 2 DIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMM 39
Score = 25.2 bits (55), Expect = 4.1
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 510 CDSGAGLCGPGAQCLETGGSVECQCPAGYKGNP 542
C LCG G QC+ T G EC+C GY+
Sbjct: 6 CRISPDLCGRG-QCVNTPGDFECKCDEGYESGF 37
>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 42
Score = 37.5 bits (87), Expect = 2e-04
Identities = 15/31 (48%), Positives = 15/31 (48%)
Query: 569 DIDECWSSNTCGSNAVCINTPGSYDCRCKEG 599
DIDEC VC NT GSY C C G
Sbjct: 1 DIDECQRDPLLCRGGVCHNTEGSYRCECPPG 31
Score = 34.4 bits (79), Expect = 0.002
Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 67 DVDECAESRHLCGPGAVCINHPGSYTCQCPP 97
D+DEC LC G VC N GSY C+CPP
Sbjct: 1 DIDECQRDPLLC-RGGVCHNTEGSYRCECPP 30
Score = 33.3 bits (76), Expect = 0.005
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 187 DVDECLGVSPCASSALCVNEKGGFKCVCPKGTTGDPYTLGCV 228
D+DEC +C N +G ++C CP G P C+
Sbjct: 1 DIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISACI 42
Score = 33.3 bits (76), Expect = 0.005
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 246 DVDECLGVSPCASSALCVNEKGGFKCVCPKGTTGDPYTLGCV 287
D+DEC +C N +G ++C CP G P C+
Sbjct: 1 DIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISACI 42
>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 37.1 bits (86), Expect = 2e-04
Identities = 15/31 (48%), Positives = 16/31 (51%)
Query: 569 DIDECWSSNTCGSNAVCINTPGSYDCRCKEG 599
DIDEC CINT GS+ CRC G
Sbjct: 2 DIDECQELPGLCQGGKCINTFGSFQCRCPTG 32
Score = 35.5 bits (82), Expect = 8e-04
Identities = 17/32 (53%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 66 EDVDECAESRHLCGPGAVCINHPGSYTCQCPP 97
ED+DEC E LC G CIN GS+ C+CP
Sbjct: 1 EDIDECQELPGLCQGG-KCINTFGSFQCRCPT 31
Score = 32.5 bits (74), Expect = 0.010
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 187 DVDECLGVSPCASSALCVNEKGGFKCVCPKGTTGDPYTLGC 227
D+DEC + C+N G F+C CP G + T C
Sbjct: 2 DIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVC 42
Score = 32.5 bits (74), Expect = 0.010
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 246 DVDECLGVSPCASSALCVNEKGGFKCVCPKGTTGDPYTLGC 286
D+DEC + C+N G F+C CP G + T C
Sbjct: 2 DIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVC 42
Score = 24.7 bits (54), Expect = 5.4
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 505 QDRGSCDSGAGLCGPGAQCLETGGSVECQCPAGYKGNP 542
+D C GLC G +C+ T GS +C+CP GY N
Sbjct: 1 EDIDECQELPGLCQGG-KCINTFGSFQCRCPTGYYLNE 37
>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 40
Score = 34.0 bits (78), Expect = 0.002
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 71 CAESRHLCGPGAVCINHPGSYTCQCPPNSSGD 102
CA +RH C A C ++ + C+C N +G+
Sbjct: 2 CANNRHQCSVHAECRDYATGFCCRCVANYTGN 33
Score = 32.9 bits (75), Expect = 0.006
Identities = 9/35 (25%), Positives = 13/35 (37%), Gaps = 1/35 (2%)
Query: 576 SNTCGSNAVCINTPGSYDCRCKEGNAGNPFVACTP 610
+ C +A C + + CRC GN C
Sbjct: 6 RHQCSVHAECRDYATGFCCRCVANYTGNGRQ-CVA 39
Score = 30.2 bits (68), Expect = 0.066
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 509 SCDSGAGLCGPGAQCLETGGSVECQCPAGYKGN 541
+C + C A+C + C+C A Y GN
Sbjct: 1 TCANNRHQCSVHAECRDYATGFCCRCVANYTGN 33
Score = 27.9 bits (62), Expect = 0.46
Identities = 9/30 (30%), Positives = 12/30 (40%)
Query: 192 LGVSPCASSALCVNEKGGFKCVCPKGTTGD 221
C+ A C + GF C C TG+
Sbjct: 4 NNRHQCSVHAECRDYATGFCCRCVANYTGN 33
Score = 27.9 bits (62), Expect = 0.46
Identities = 9/30 (30%), Positives = 12/30 (40%)
Query: 251 LGVSPCASSALCVNEKGGFKCVCPKGTTGD 280
C+ A C + GF C C TG+
Sbjct: 4 NNRHQCSVHAECRDYATGFCCRCVANYTGN 33
>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 33.3 bits (76), Expect = 0.006
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 569 DIDECWSSNTCGSNAVCINTPGSYDCRCKEGNAGNP 604
D++EC T + C+NTPGSY C C NP
Sbjct: 2 DVNEC-LDPTTCISGNCVNTPGSYICDCPPDFELNP 36
Score = 32.2 bits (73), Expect = 0.014
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 67 DVDECAESRHLCGPGAVCINHPGSYTCQCPPNSSGDP 103
DV+EC + C+N PGSY C CPP+ +P
Sbjct: 2 DVNECLDPTTCIS--GNCVNTPGSYICDCPPDFELNP 36
Score = 31.4 bits (71), Expect = 0.027
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 187 DVDECLGVSPCASSALCVNEKGGFKCVCPKGTTGDPYTLGCV 228
DV+ECL + C S CVN G + C CP +P +GCV
Sbjct: 2 DVNECLDPTTC-ISGNCVNTPGSYICDCPPDFELNPTRVGCV 42
Score = 31.4 bits (71), Expect = 0.027
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 246 DVDECLGVSPCASSALCVNEKGGFKCVCPKGTTGDPYTLGCV 287
DV+ECL + C S CVN G + C CP +P +GCV
Sbjct: 2 DVNECLDPTTC-ISGNCVNTPGSYICDCPPDFELNPTRVGCV 42
>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens)
[TaxId: 9606]}
Length = 53
Score = 33.0 bits (75), Expect = 0.008
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 7/39 (17%)
Query: 568 VDIDECWSSN-------TCGSNAVCINTPGSYDCRCKEG 599
VD+DEC S + +C N G Y C C+ G
Sbjct: 2 VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPG 40
Score = 32.6 bits (74), Expect = 0.012
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 6/37 (16%)
Query: 67 DVDECAESRHLCGPGA------VCINHPGSYTCQCPP 97
D+DECA +C N+ G Y C C P
Sbjct: 3 DLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRP 39
Score = 26.5 bits (58), Expect = 1.7
Identities = 13/48 (27%), Positives = 15/48 (31%), Gaps = 7/48 (14%)
Query: 187 DVDECL-------GVSPCASSALCVNEKGGFKCVCPKGTTGDPYTLGC 227
D+DEC LC N GG+ C C G C
Sbjct: 3 DLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSC 50
Score = 26.5 bits (58), Expect = 1.7
Identities = 13/48 (27%), Positives = 15/48 (31%), Gaps = 7/48 (14%)
Query: 246 DVDECL-------GVSPCASSALCVNEKGGFKCVCPKGTTGDPYTLGC 286
D+DEC LC N GG+ C C G C
Sbjct: 3 DLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSC 50
Score = 24.9 bits (54), Expect = 6.6
Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 3/43 (6%)
Query: 23 ECTLAT--CGTQGQCPGGAECVNIAGGVSYCACPKGFRPKEDG 63
EC + Q C N GG +C+C G+ +ED
Sbjct: 6 ECASRSKSGEEDPQPQCQHLCHNYVGGY-FCSCRPGYELQEDR 47
>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 31.6 bits (72), Expect = 0.016
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 568 VDIDECWSSNTCGSNAVCINTPGSYDCRCKEGNAG 602
VD D+C SN C + C + SY+C C G G
Sbjct: 1 VDGDQC-ESNPCLNGGSCKDDINSYECWCPFGFEG 34
Score = 31.6 bits (72), Expect = 0.020
Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 186 LDVDECLGVSPCASSALCVNEKGGFKCVCPKGTTGD 221
+D D+C +PC + C ++ ++C CP G G
Sbjct: 1 VDGDQCES-NPCLNGGSCKDDINSYECWCPFGFEGK 35
Score = 31.6 bits (72), Expect = 0.020
Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 245 LDVDECLGVSPCASSALCVNEKGGFKCVCPKGTTGD 280
+D D+C +PC + C ++ ++C CP G G
Sbjct: 1 VDGDQCES-NPCLNGGSCKDDINSYECWCPFGFEGK 35
Score = 31.2 bits (71), Expect = 0.023
Identities = 12/36 (33%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Query: 67 DVDECAESRHLCGPGAVCINHPGSYTCQCPPNSSGD 102
D D+C + C G C + SY C CP G
Sbjct: 2 DGDQCE--SNPCLNGGSCKDDINSYECWCPFGFEGK 35
Score = 24.2 bits (53), Expect = 6.7
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 517 CGPGAQCLETGGSVECQCPAGYKG 540
C G C + S EC CP G++G
Sbjct: 11 CLNGGSCKDDINSYECWCPFGFEG 34
>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 40
Score = 31.7 bits (72), Expect = 0.019
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 569 DIDECWSSNTCGSNAVCINTPGSYDCRCKEG 599
DIDEC + C + VC N PG+++C C
Sbjct: 1 DIDECENGGFC--SGVCHNLPGTFECICGPD 29
Score = 28.6 bits (64), Expect = 0.19
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 67 DVDECAESRHLCGPGAVCINHPGSYTCQCPPNSSGDPLLG 106
D+DEC VC N PG++ C C P+S+ +G
Sbjct: 1 DIDECENG---GFCSGVCHNLPGTFECICGPDSALAGQIG 37
Score = 28.6 bits (64), Expect = 0.25
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 187 DVDECLGVSPCASSALCVNEKGGFKCVCPKGTTGD 221
D+DEC C S +C N G F+C+C +
Sbjct: 1 DIDECENGGFC--SGVCHNLPGTFECICGPDSALA 33
Score = 28.6 bits (64), Expect = 0.25
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 246 DVDECLGVSPCASSALCVNEKGGFKCVCPKGTTGD 280
D+DEC C S +C N G F+C+C +
Sbjct: 1 DIDECENGGFC--SGVCHNLPGTFECICGPDSALA 33
>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor,
different EGF domains {Human (Homo sapiens) [TaxId:
9606]}
Length = 41
Score = 30.9 bits (70), Expect = 0.039
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 570 IDECWSSNTCGSNAVCINTPGSYDCRCKEG 599
IDEC + + +C+N G Y C+C+EG
Sbjct: 1 IDEC--QDPDTCSQLCVNLEGGYKCQCEEG 28
Score = 28.9 bits (65), Expect = 0.16
Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 3/30 (10%)
Query: 68 VDECAESRHLCGPGAVCINHPGSYTCQCPP 97
+DEC + +C+N G Y CQC
Sbjct: 1 IDECQDP---DTCSQLCVNLEGGYKCQCEE 27
Score = 28.6 bits (64), Expect = 0.21
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 188 VDECLGVSPCASSALCVNEKGGFKCVCPKGTTGDPYTLGC 227
+DEC C S LCVN +GG+KC C +G DP+T C
Sbjct: 1 IDECQDPDTC--SQLCVNLEGGYKCQCEEGFQLDPHTKAC 38
Score = 28.6 bits (64), Expect = 0.21
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 247 VDECLGVSPCASSALCVNEKGGFKCVCPKGTTGDPYTLGC 286
+DEC C S LCVN +GG+KC C +G DP+T C
Sbjct: 1 IDECQDPDTC--SQLCVNLEGGYKCQCEEGFQLDPHTKAC 38
>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 37
Score = 30.4 bits (69), Expect = 0.046
Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Query: 67 DVDECAESRHLCGPGAVCINHPGSYTCQCPPNSSGD 102
D D+CA S C G C + SY C C P G
Sbjct: 1 DGDQCASSP--CQNGGSCKDQLQSYICFCLPAFEGR 34
Score = 30.4 bits (69), Expect = 0.050
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 187 DVDECLGVSPCASSALCVNEKGGFKCVCPKGTTGD 221
D D+C SPC + C ++ + C C G
Sbjct: 1 DGDQCAS-SPCQNGGSCKDQLQSYICFCLPAFEGR 34
Score = 30.4 bits (69), Expect = 0.050
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 246 DVDECLGVSPCASSALCVNEKGGFKCVCPKGTTGD 280
D D+C SPC + C ++ + C C G
Sbjct: 1 DGDQCAS-SPCQNGGSCKDQLQSYICFCLPAFEGR 34
Score = 30.0 bits (68), Expect = 0.069
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 569 DIDECWSSNTCGSNAVCINTPGSYDCRCKEGNAG 602
D D+C +S+ C + C + SY C C G
Sbjct: 1 DGDQC-ASSPCQNGGSCKDQLQSYICFCLPAFEG 33
Score = 23.9 bits (52), Expect = 9.3
Identities = 7/24 (29%), Positives = 10/24 (41%)
Query: 517 CGPGAQCLETGGSVECQCPAGYKG 540
C G C + S C C ++G
Sbjct: 10 CQNGGSCKDQLQSYICFCLPAFEG 33
>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo
sapiens) [TaxId: 9606]}
Length = 42
Score = 30.6 bits (69), Expect = 0.049
Identities = 8/29 (27%), Positives = 10/29 (34%)
Query: 571 DECWSSNTCGSNAVCINTPGSYDCRCKEG 599
+EC + C N G Y C C
Sbjct: 1 NECTDFVDVPCSHFCNNFIGGYFCSCPPE 29
Score = 26.7 bits (59), Expect = 1.0
Identities = 10/29 (34%), Positives = 12/29 (41%)
Query: 189 DECLGVSPCASSALCVNEKGGFKCVCPKG 217
+EC S C N GG+ C CP
Sbjct: 1 NECTDFVDVPCSHFCNNFIGGYFCSCPPE 29
Score = 26.7 bits (59), Expect = 1.0
Identities = 10/29 (34%), Positives = 12/29 (41%)
Query: 248 DECLGVSPCASSALCVNEKGGFKCVCPKG 276
+EC S C N GG+ C CP
Sbjct: 1 NECTDFVDVPCSHFCNNFIGGYFCSCPPE 29
Score = 25.6 bits (56), Expect = 2.8
Identities = 10/29 (34%), Positives = 12/29 (41%), Gaps = 1/29 (3%)
Query: 69 DECAESRHLCGPGAVCINHPGSYTCQCPP 97
+EC + C N G Y C CPP
Sbjct: 1 NECTDFVD-VPCSHFCNNFIGGYFCSCPP 28
>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated
serine protease 2, MASP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 45
Score = 30.6 bits (69), Expect = 0.053
Identities = 10/32 (31%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Query: 570 IDECWSSN--TCGSNAVCINTPGSYDCRCKEG 599
IDEC + + C N G + C C+ G
Sbjct: 1 IDECQVAPGEAPTCDHHCHNHLGGFYCSCRAG 32
Score = 29.5 bits (66), Expect = 0.12
Identities = 9/31 (29%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 68 VDECAESRHLCGP-GAVCINHPGSYTCQCPP 97
+DEC + C NH G + C C
Sbjct: 1 IDECQVAPGEAPTCDHHCHNHLGGFYCSCRA 31
Score = 24.5 bits (53), Expect = 6.7
Identities = 12/43 (27%), Positives = 13/43 (30%), Gaps = 2/43 (4%)
Query: 188 VDECLGVS--PCASSALCVNEKGGFKCVCPKGTTGDPYTLGCV 228
+DEC C N GGF C C G C
Sbjct: 1 IDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCS 43
Score = 24.5 bits (53), Expect = 6.7
Identities = 12/43 (27%), Positives = 13/43 (30%), Gaps = 2/43 (4%)
Query: 247 VDECLGVS--PCASSALCVNEKGGFKCVCPKGTTGDPYTLGCV 287
+DEC C N GGF C C G C
Sbjct: 1 IDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCS 43
>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein
1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 39
Score = 30.0 bits (68), Expect = 0.072
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 188 VDECLGVSPCASSALCVNEKGGFKCVCPKGTTGD 221
V+EC+ +PC + A C+++ G F+C+C G G
Sbjct: 1 VNECVS-NPCQNDATCLDQIGEFQCICMPGYEGV 33
Score = 30.0 bits (68), Expect = 0.072
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 247 VDECLGVSPCASSALCVNEKGGFKCVCPKGTTGD 280
V+EC+ +PC + A C+++ G F+C+C G G
Sbjct: 1 VNECVS-NPCQNDATCLDQIGEFQCICMPGYEGV 33
Score = 29.3 bits (66), Expect = 0.14
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 68 VDECAESRHLCGPGAVCINHPGSYTCQCPPNSSGD 102
V+EC + C A C++ G + C C P G
Sbjct: 1 VNECVSNP--CQNDATCLDQIGEFQCICMPGYEGV 33
Score = 28.9 bits (65), Expect = 0.19
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 570 IDECWSSNTCGSNAVCINTPGSYDCRCKEGNAG 602
++EC SN C ++A C++ G + C C G G
Sbjct: 1 VNEC-VSNPCQNDATCLDQIGEFQCICMPGYEG 32
Score = 24.3 bits (53), Expect = 6.7
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 517 CGPGAQCLETGGSVECQCPAGYKG 540
C A CL+ G +C C GY+G
Sbjct: 9 CQNDATCLDQIGEFQCICMPGYEG 32
>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated
serine protease 2, MASP2 {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 45
Score = 29.1 bits (65), Expect = 0.19
Identities = 12/31 (38%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 68 VDECAESRHLCGP-GAVCINHPGSYTCQCPP 97
VDEC S P C N+ G Y C C
Sbjct: 1 VDECRTSLGDSVPCDHYCHNYLGGYYCSCRV 31
Score = 29.1 bits (65), Expect = 0.19
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Query: 570 IDECWSSN--TCGSNAVCINTPGSYDCRCKEG 599
+DEC +S + + C N G Y C C+ G
Sbjct: 1 VDECRTSLGDSVPCDHYCHNYLGGYYCSCRVG 32
>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL)
receptor, different EGF domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 40
Score = 28.6 bits (64), Expect = 0.24
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Query: 68 VDECAESRHLCGPGAVCINHPGSYTCQCPP 97
+EC ++ C VC + Y C CP
Sbjct: 2 TNECLDNNGGCS--HVCNDLKIGYECLCPD 29
Score = 27.4 bits (61), Expect = 0.58
Identities = 10/29 (34%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 571 DECWSSNTCGSNAVCINTPGSYDCRCKEG 599
+EC N G + VC + Y+C C +G
Sbjct: 3 NEC-LDNNGGCSHVCNDLKIGYECLCPDG 30
Score = 25.9 bits (57), Expect = 2.2
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 188 VDECLGVSPCASSALCVNEKGGFKCVCPKG 217
+ECL + S +C + K G++C+CP G
Sbjct: 2 TNECL-DNNGGCSHVCNDLKIGYECLCPDG 30
Score = 25.9 bits (57), Expect = 2.2
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 247 VDECLGVSPCASSALCVNEKGGFKCVCPKG 276
+ECL + S +C + K G++C+CP G
Sbjct: 2 TNECL-DNNGGCSHVCNDLKIGYECLCPDG 30
>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo
sapiens) [TaxId: 9606]}
Length = 39
Score = 28.1 bits (63), Expect = 0.29
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 189 DECLGVSPCASSALCVNEKGGFKCVCPKGTTGD 221
D+C SPC + C + G + C C +G G
Sbjct: 1 DQCET-SPCQNQGKCKDGLGEYTCTCLEGFEGK 32
Score = 28.1 bits (63), Expect = 0.29
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 248 DECLGVSPCASSALCVNEKGGFKCVCPKGTTGD 280
D+C SPC + C + G + C C +G G
Sbjct: 1 DQCET-SPCQNQGKCKDGLGEYTCTCLEGFEGK 32
Score = 27.3 bits (61), Expect = 0.63
Identities = 11/34 (32%), Positives = 13/34 (38%), Gaps = 2/34 (5%)
Query: 69 DECAESRHLCGPGAVCINHPGSYTCQCPPNSSGD 102
D+C S C C + G YTC C G
Sbjct: 1 DQCETSP--CQNQGKCKDGLGEYTCTCLEGFEGK 32
Score = 26.2 bits (58), Expect = 1.5
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 571 DECWSSNTCGSNAVCINTPGSYDCRCKEGNAG 602
D+C ++ C + C + G Y C C EG G
Sbjct: 1 DQC-ETSPCQNQGKCKDGLGEYTCTCLEGFEG 31
>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein
1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 35
Score = 27.3 bits (61), Expect = 0.53
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 189 DECLGVSPCASSALCVNEKGGFKCVCPKGTTGD 221
DEC SPC + C+++ F+C CP G TG
Sbjct: 1 DECAS-SPCLHNGRCLDKINEFQCECPTGFTGH 32
Score = 27.3 bits (61), Expect = 0.53
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 248 DECLGVSPCASSALCVNEKGGFKCVCPKGTTGD 280
DEC SPC + C+++ F+C CP G TG
Sbjct: 1 DECAS-SPCLHNGRCLDKINEFQCECPTGFTGH 32
Score = 26.9 bits (60), Expect = 0.76
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Query: 69 DECAESRHLCGPGAVCINHPGSYTCQCPPNSSGD 102
DECA S C C++ + C+CP +G
Sbjct: 1 DECASSP--CLHNGRCLDKINEFQCECPTGFTGH 32
Score = 25.4 bits (56), Expect = 2.4
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 571 DECWSSNTCGSNAVCINTPGSYDCRCKEGNAG 602
DEC +S+ C N C++ + C C G G
Sbjct: 1 DEC-ASSPCLHNGRCLDKINEFQCECPTGFTG 31
>d2f2aa1 c.117.1.1 (A:1-485) Glutamyl-tRNA(Gln) amidotransferase
subunit A {Staphylococcus aureus [TaxId: 1280]}
Length = 485
Score = 30.5 bits (68), Expect = 0.76
Identities = 18/94 (19%), Positives = 31/94 (32%), Gaps = 5/94 (5%)
Query: 447 FNCVPPVTMPVCIPPCGPNAHCEYNSESPGSSPGSDNICVCNSGTHGNPYAGCGTAGPQD 506
F + T+ + + N + ++ NP+ G
Sbjct: 99 FVPIYESTVMEKLHKENAVLIGKLNMDEFAMGGSTETSYFK---KTVNPFDHKAVPGGSS 155
Query: 507 RGSCDSGAGLCGPGAQCLETGGSVECQCPAGYKG 540
GS + A P + +TGGS+ + PA Y G
Sbjct: 156 GGSAAAVAAGLVPLSLGSDTGGSI--RQPAAYCG 187
>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 39
Score = 26.0 bits (57), Expect = 1.9
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 571 DECWSSNTCGSNAVCINTPGSYDCRCKEGNAGNPFVAC 608
DEC N CG N C N G ++C C+EG P + C
Sbjct: 2 DECSVGNPCG-NGTCKNVIGGFECTCEEGFEPGPMMTC 38
>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 39
Score = 25.9 bits (57), Expect = 2.0
Identities = 7/27 (25%), Positives = 11/27 (40%)
Query: 195 SPCASSALCVNEKGGFKCVCPKGTTGD 221
+ C+ CV + C C G +G
Sbjct: 7 TSCSGHGECVETINNYTCKCDPGFSGL 33
Score = 25.9 bits (57), Expect = 2.0
Identities = 7/27 (25%), Positives = 11/27 (40%)
Query: 254 SPCASSALCVNEKGGFKCVCPKGTTGD 280
+ C+ CV + C C G +G
Sbjct: 7 TSCSGHGECVETINNYTCKCDPGFSGL 33
Score = 25.1 bits (55), Expect = 3.8
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 78 CGPGAVCINHPGSYTCQCPPNSSGD 102
C C+ +YTC+C P SG
Sbjct: 9 CSGHGECVETINNYTCKCDPGFSGL 33
>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 57
Score = 26.3 bits (58), Expect = 2.3
Identities = 10/32 (31%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 41 CVNIAGGVSYCACPKGFRPKEDGY-CEDVDEC 71
C N A C+C +G+R E+ CE
Sbjct: 14 CKNSADNKVVCSCTEGYRLAENQKSCEPAVPF 45
>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 40
Score = 25.5 bits (56), Expect = 2.6
Identities = 7/27 (25%), Positives = 10/27 (37%)
Query: 195 SPCASSALCVNEKGGFKCVCPKGTTGD 221
C+ C+ G + C C G G
Sbjct: 7 MSCSKQGECLETIGNYTCSCYPGFYGP 33
Score = 25.5 bits (56), Expect = 2.6
Identities = 7/27 (25%), Positives = 10/27 (37%)
Query: 254 SPCASSALCVNEKGGFKCVCPKGTTGD 280
C+ C+ G + C C G G
Sbjct: 7 MSCSKQGECLETIGNYTCSCYPGFYGP 33
Score = 24.8 bits (54), Expect = 4.6
Identities = 9/25 (36%), Positives = 11/25 (44%)
Query: 78 CGPGAVCINHPGSYTCQCPPNSSGD 102
C C+ G+YTC C P G
Sbjct: 9 CSKQGECLETIGNYTCSCYPGFYGP 33
>d1h30a1 b.29.1.4 (A:261-451) Growth-arrest-specific protein Gas6
{Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 27.9 bits (61), Expect = 3.7
Identities = 7/23 (30%), Positives = 11/23 (47%), Gaps = 1/23 (4%)
Query: 50 YCACPKGFRPKEDGY-CEDVDEC 71
+C G + +D CED+ C
Sbjct: 1 HCDGRGGLKLSQDMDTCEDILPC 23
>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos
taurus) [TaxId: 9913]}
Length = 51
Score = 25.2 bits (55), Expect = 4.5
Identities = 7/38 (18%), Positives = 12/38 (31%), Gaps = 2/38 (5%)
Query: 41 CVNIAGGVSYCACPKGFRPKEDGY-CEDVDECAESRHL 77
C V C+C G+ +D C + +
Sbjct: 12 CREERSEV-RCSCAHGYVLGDDSKSCVSTERFPCGKFT 48
>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL)
receptor, different EGF domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 50
Score = 24.9 bits (54), Expect = 5.6
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 76 HLCGPGAVCINHPGSYTCQCPP 97
+LC P H +TC CP
Sbjct: 16 YLCLPAPQINPHSPKFTCACPD 37
>d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 24.4 bits (53), Expect = 8.7
Identities = 9/32 (28%), Positives = 12/32 (37%), Gaps = 1/32 (3%)
Query: 41 CVNIAGGVSYCACPKGFRPKEDGY-CEDVDEC 71
C + G C C +G+ DG C E
Sbjct: 13 CSDHTGTKRSCRCHEGYSLLADGVSCTPTVEY 44
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.139 0.492
Gapped
Lambda K H
0.267 0.0589 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 3,004,828
Number of extensions: 170422
Number of successful extensions: 1227
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1073
Number of HSP's successfully gapped: 471
Length of query: 739
Length of database: 2,407,596
Length adjustment: 92
Effective length of query: 647
Effective length of database: 1,144,436
Effective search space: 740450092
Effective search space used: 740450092
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (25.7 bits)