BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy942
(762 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase
pdb|2ZAT|B Chain B, Crystal Structure Of A Mammalian Reductase
pdb|2ZAT|C Chain C, Crystal Structure Of A Mammalian Reductase
pdb|2ZAT|D Chain D, Crystal Structure Of A Mammalian Reductase
Length = 260
Score = 258 bits (659), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 133/250 (53%), Positives = 170/250 (68%), Gaps = 1/250 (0%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L KVA+VTAS+DGIG AIA+RL+ +GA VV+SSRK+ NV++ V TLQ EG ++G VC
Sbjct: 12 LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEG-LSVTGTVC 70
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
HV K EDR++L A GG+DILVSNAAVNP G +++ E VWDKI VNVK+T L+
Sbjct: 71 HVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLM 130
Query: 499 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 558
T+ V+P + KR PF LG Y+VSKTALLGLTK +A +LA NIRVN
Sbjct: 131 TKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVN 190
Query: 559 CLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVI 618
CLAPG+ KT F+ L+ + E ++ + RL P++ GIV+FLCS+DASYITGE +
Sbjct: 191 CLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSEDASYITGETV 250
Query: 619 VAAGGMQSRL 628
V GG SRL
Sbjct: 251 VVGGGTASRL 260
Score = 202 bits (514), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 104/186 (55%), Positives = 130/186 (69%), Gaps = 1/186 (0%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L KVA+VTAS+DGIG AIA+RL+ +GA VV+SSRK+ NV++ V TLQ EG ++G VC
Sbjct: 12 LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEG-LSVTGTVC 70
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
HV K EDR++L A GG+DILVSNAAVNP G +++ E VWDKI VNVK+T L+
Sbjct: 71 HVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLM 130
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
T+ V+P + KR PF LG Y+VSKTALLGLTK +A +LA NIRVN
Sbjct: 131 TKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVN 190
Query: 190 CLAPGI 195
CLAPG+
Sbjct: 191 CLAPGL 196
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 48/65 (73%), Gaps = 2/65 (3%)
Query: 680 DRMIAMLSTDKLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLP 739
+R++AM L+GG+DILVSNAAVNP +++ +E VWDKI VN+K++ L+T+ V+P
Sbjct: 79 ERLVAM--AVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVP 136
Query: 740 YMRKK 744
M K+
Sbjct: 137 EMEKR 141
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 36/44 (81%)
Query: 635 FRFIGAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
F +G Y+VSKTAL GLTK +A +LAP NIRVNCLAPGLI+T F
Sbjct: 158 FPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNF 201
>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR
FAMILY) MEMBER 4 (Dhrs4)
pdb|3O4R|B Chain B, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR
FAMILY) MEMBER 4 (Dhrs4)
pdb|3O4R|C Chain C, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR
FAMILY) MEMBER 4 (Dhrs4)
pdb|3O4R|D Chain D, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR
FAMILY) MEMBER 4 (Dhrs4)
Length = 261
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 133/250 (53%), Positives = 171/250 (68%), Gaps = 1/250 (0%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
LA KVA+VTAS+DGIGFAIA+RL+ +GA VV+SSRK+ NV++AV TLQ EG ++G VC
Sbjct: 13 LANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLS-VTGTVC 71
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
HV K EDR++L A K GGIDILVSNAAVNP G +++ E VWDK ++NVK+ L+
Sbjct: 72 HVGKAEDRERLVATAVKLHGGIDILVSNAAVNPFFGSIMDVTEEVWDKTLDINVKAPALM 131
Query: 499 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 558
T+ V+P + KR +P Y+VSKTALLGLTK +A +LA NIRVN
Sbjct: 132 TKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVN 191
Query: 559 CLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVI 618
CLAPG+ KT F+ L+ +E E + + RL P++ GIV+FLCS+DASYITGE +
Sbjct: 192 CLAPGLIKTSFSRMLWMDKEKEESMKETLRIRRLGEPEDCAGIVSFLCSEDASYITGETV 251
Query: 619 VAAGGMQSRL 628
V GG SRL
Sbjct: 252 VVGGGTPSRL 261
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 102/186 (54%), Positives = 130/186 (69%), Gaps = 1/186 (0%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L KVA+VTAS+DGIGFAIA+RL+ +GA VV+SSRK+ NV++AV TLQ EG ++G VC
Sbjct: 13 LANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLS-VTGTVC 71
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
HV K EDR++L A K GGIDILVSNAAVNP G +++ E VWDK ++NVK+ L+
Sbjct: 72 HVGKAEDRERLVATAVKLHGGIDILVSNAAVNPFFGSIMDVTEEVWDKTLDINVKAPALM 131
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
T+ V+P + KR +P Y+VSKTALLGLTK +A +LA NIRVN
Sbjct: 132 TKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVN 191
Query: 190 CLAPGI 195
CLAPG+
Sbjct: 192 CLAPGL 197
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 680 DRMIAMLSTDKLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLP 739
DR + + KL+GGIDILVSNAAVNP +++ +E VWDK D+N+K+ L+T+ V+P
Sbjct: 78 DRERLVATAVKLHGGIDILVSNAAVNPFFGSIMDVTEEVWDKTLDINVKAPALMTKAVVP 137
Query: 740 YMRKK 744
M K+
Sbjct: 138 EMEKR 142
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGDRMIAM 685
Y+VSKTAL GLTK +A +LAP NIRVNCLAPGLI+T F RM+ M
Sbjct: 165 YNVSKTALLGLTKTLAIELAPRNIRVNCLAPGLIKTSF-SRMLWM 208
>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441)
From Thermotoga Maritima At 2.07 A Resolution
pdb|1VL8|B Chain B, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441)
From Thermotoga Maritima At 2.07 A Resolution
Length = 267
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 135/246 (54%), Gaps = 2/246 (0%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L G+VA+VT S G+GF IA+ L+ G SVV++SR ++A + L ++ + C
Sbjct: 19 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC 78
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
V+ E+ +KL E ++KFG +D +V+ A +N P E P + + ++ EVN+ T+ +
Sbjct: 79 DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRH-PAEEFPLDEFRQVIEVNLFGTYYV 137
Query: 499 TQEVLPYIRKR-NXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 557
+E +R+ N + AY+ SK + LTKA+A++ IRV
Sbjct: 138 CREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRV 197
Query: 558 NCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEV 617
N +APG +TK A++ E + + +P+GR VP+++ G+ FL S++A Y+TG++
Sbjct: 198 NVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVTGQI 257
Query: 618 IVAAGG 623
I GG
Sbjct: 258 IFVDGG 263
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 99/186 (53%), Gaps = 2/186 (1%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L G+VA+VT S G+GF IA+ L+ G SVV++SR ++A + L ++ + C
Sbjct: 19 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC 78
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
V+ E+ +KL E ++KFG +D +V+ A +N P E P + + ++ EVN+ T+ +
Sbjct: 79 DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRH-PAEEFPLDEFRQVIEVNLFGTYYV 137
Query: 130 TQEVLPYIRKR-NXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 188
+E +R+ N + AY+ SK + LTKA+A++ IRV
Sbjct: 138 CREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRV 197
Query: 189 NCLAPG 194
N +APG
Sbjct: 198 NVIAPG 203
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%)
Query: 628 LTKSTVEFRFIGAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
LT V I AY+ SK + LTK +A++ IRVN +APG RTK
Sbjct: 159 LTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKM 209
>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier
Protein) Reductase
pdb|2PNF|B Chain B, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier
Protein) Reductase
pdb|2P68|A Chain A, Crystal Structure Of Aq_1716 From Aquifex Aeolicus Vf5
pdb|2P68|B Chain B, Crystal Structure Of Aq_1716 From Aquifex Aeolicus Vf5
Length = 248
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 131/247 (53%), Gaps = 3/247 (1%)
Query: 378 RLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVV 437
+L GKV++VT S+ GIG AIA++L++ G++V+I+ E + + K GV
Sbjct: 4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVE 63
Query: 438 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 497
++ +E K FE GIDILV+NA + + W+++ +VN+ TFL
Sbjct: 64 MNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDK-LFLRMSLLDWEEVLKVNLTGTFL 122
Query: 498 LTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 557
+TQ L + K+ YS +K L+G TK++A++LA N+ V
Sbjct: 123 VTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRNVLV 182
Query: 558 NCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEV 617
N +APG +T A L +EE + +P+GR P+E+ +V FLCS+ ASYITGEV
Sbjct: 183 NAVAPGFIETDMTAVL--SEEIKQKYKEQIPLGRFGSPEEVANVVLFLCSELASYITGEV 240
Query: 618 IVAAGGM 624
I GGM
Sbjct: 241 IHVNGGM 247
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 95/186 (51%), Gaps = 1/186 (0%)
Query: 9 RLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVV 68
+L GKV++VT S+ GIG AIA++L++ G++V+I+ E + + K GV
Sbjct: 4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVE 63
Query: 69 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 128
++ +E K FE GIDILV+NA + + W+++ +VN+ TFL
Sbjct: 64 MNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDK-LFLRMSLLDWEEVLKVNLTGTFL 122
Query: 129 LTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 188
+TQ L + K+ YS +K L+G TK++A++LA N+ V
Sbjct: 123 VTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRNVLV 182
Query: 189 NCLAPG 194
N +APG
Sbjct: 183 NAVAPG 188
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 4/49 (8%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGDRMIAMLSTD 689
YS +K L G TK +A++LAP N+ VN +APG I T M A+LS +
Sbjct: 157 YSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETD----MTAVLSEE 201
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 14/99 (14%)
Query: 653 KVVAEDLA------PENIRVNCLAPGLIRTKFGDRMIAMLSTDKLYGGIDILVSNAAVNP 706
K VAE++A + +N L+ I F + L GIDILV+NA +
Sbjct: 45 KAVAEEIANKYGVKAHGVEMNLLSEESINKAFEE-------IYNLVDGIDILVNNAGITR 97
Query: 707 ANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKKK 745
++ + S + W+++ VNL +FL+TQ L M K++
Sbjct: 98 -DKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQR 135
>pdb|1GAX|A Chain A, Crystal Structure Of Thermus Thermophilus Valyl-Trna
Synthetase Complexed With Trna(Val) And Valyl-Adenylate
Analogue
pdb|1GAX|B Chain B, Crystal Structure Of Thermus Thermophilus Valyl-Trna
Synthetase Complexed With Trna(Val) And Valyl-Adenylate
Analogue
pdb|1IVS|A Chain A, Crystal Structure Of Thermus Thermophilus Valyl-Trna
Synthetase Complexed With Trna(Val) And Valyl-Adenylate
Analogue
pdb|1IVS|B Chain B, Crystal Structure Of Thermus Thermophilus Valyl-Trna
Synthetase Complexed With Trna(Val) And Valyl-Adenylate
Analogue
pdb|1IYW|A Chain A, Preliminary Structure Of Thermus Thermophilus Ligand-Free
Valyl-Trna Synthetase
pdb|1IYW|B Chain B, Preliminary Structure Of Thermus Thermophilus Ligand-Free
Valyl-Trna Synthetase
Length = 862
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/136 (49%), Positives = 91/136 (66%), Gaps = 9/136 (6%)
Query: 235 LPSSYSPQYVEAAWYPWWEKQGFFKPEYGRKSIGEKNPKGKFVMVIPPPNVTGTLHLGHA 294
LP +Y P+ VE W W K F K+ K FV+ +PPPNVTG+LH+GHA
Sbjct: 3 LPKAYDPKSVEPKWAEKWAKNPFV--------ANPKSGKPPFVIFMPPPNVTGSLHMGHA 54
Query: 295 LTNAVEDSITRWNRMKGKTTLWNPGCDHAGIATQVVVEKKLWREEKKTRHEIGREKFIEK 354
L N+++D++ R+ RM+G +W PG DHAGIATQVVVE+ L + E KTRH++GREKF+E+
Sbjct: 55 LDNSLQDALIRYKRMRGFEAVWLPGTDHAGIATQVVVERLLLK-EGKTRHDLGREKFLER 113
Query: 355 VWEWKKEVFSTSTKIM 370
VW+WK+E T K +
Sbjct: 114 VWQWKEESGGTILKQL 129
>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL
Dehydrogenase From Clostridium Thermocellum
Length = 247
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 137/250 (54%), Gaps = 9/250 (3%)
Query: 378 RLAGKVAVVTASSDGIGFAIAKRLSTEGASVVIS-SRKESNVNKAVETLQKEGHQKISGV 436
+L GK A+VT SS G+G AIA +L GA++V++ S ++++ E + G I+ V
Sbjct: 2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAG---INVV 58
Query: 437 VC--HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKS 494
V V ED + + + A FG IDILV+NA + T +++ E WD + N+KS
Sbjct: 59 VAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDT-LMLKMSEKDWDDVLNTNLKS 117
Query: 495 TFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASEN 554
+L T+ V + K+ + Y+ SK L+G TK++A++ A++
Sbjct: 118 AYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEFAAKG 177
Query: 555 IRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYIT 614
I N +APGI KT L ++ E+ ++N+P+ R P+E+ +V FL SDD++YIT
Sbjct: 178 IYCNAVAPGIIKTDMTDVL--PDKVKEMYLNNIPLKRFGTPEEVANVVGFLASDDSNYIT 235
Query: 615 GEVIVAAGGM 624
G+VI GG+
Sbjct: 236 GQVINIDGGL 245
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 100/190 (52%), Gaps = 7/190 (3%)
Query: 9 RLTGKVAVVTASSDGIGFAIAKRLSAEGASVVIS-SRKESNVNKAVETLQKEGHQKISGV 67
+L GK A+VT SS G+G AIA +L GA++V++ S ++++ E + G I+ V
Sbjct: 2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAG---INVV 58
Query: 68 VC--HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKS 125
V V ED + + + A FG IDILV+NA + T +++ E WD + N+KS
Sbjct: 59 VAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDT-LMLKMSEKDWDDVLNTNLKS 117
Query: 126 TFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASEN 185
+L T+ V + K+ + Y+ SK L+G TK++A++ A++
Sbjct: 118 AYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEFAAKG 177
Query: 186 IRVNCLAPGI 195
I N +APGI
Sbjct: 178 IYCNAVAPGI 187
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 692 YGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKKK 745
+G IDILV+NA + + +++ SE WD + + NLKS++L T+ V M K+K
Sbjct: 81 FGRIDILVNNAGITR-DTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQK 133
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGD 680
Y+ SK L G TK +A++ A + I N +APG+I+T D
Sbjct: 155 YAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTD 194
>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
pdb|3EMK|B Chain B, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
pdb|3EMK|C Chain C, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
pdb|3EMK|D Chain D, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
Length = 246
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 137/248 (55%), Gaps = 11/248 (4%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L G+ A+VT ++ G+G AIA+ L +GA V + +E + + L E ++I
Sbjct: 5 LTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKE----LAAELGERIFVFPA 60
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
+++ +E + L + AE++ GG+DILV+NA + G V + WD + VN+ S F L
Sbjct: 61 NLSDREAVKALGQKAEEEMGGVDILVNNAGITR-DGLFVRMSDEDWDAVLTVNLTSVFNL 119
Query: 499 TQEVL-PYIRKRNXXXXXXXXXXXXLA-PFKLLGAYSVSKTALLGLTKAVAQDLASENIR 556
T+E+ P +R+RN P + Y SK L+G +K++AQ++AS N+
Sbjct: 120 TRELTHPMMRRRNGRIINITSIVGVTGNPGQ--ANYCASKAGLIGFSKSLAQEIASRNVT 177
Query: 557 VNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGE 616
VNC+APG ++ L E ++ + + N+PM R+ V ++ V +L SD+A+Y+TG+
Sbjct: 178 VNCIAPGFIESAMTGKLNEKQK--DAIMGNIPMKRMGVGADIAAAVVYLASDEAAYVTGQ 235
Query: 617 VIVAAGGM 624
+ GGM
Sbjct: 236 TLHVNGGM 243
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 105/187 (56%), Gaps = 9/187 (4%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
LTG+ A+VT ++ G+G AIA+ L A+GA V + +E + + L E ++I
Sbjct: 5 LTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKE----LAAELGERIFVFPA 60
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
+++ +E + L + AE++ GG+DILV+NA + G V + WD + VN+ S F L
Sbjct: 61 NLSDREAVKALGQKAEEEMGGVDILVNNAGITR-DGLFVRMSDEDWDAVLTVNLTSVFNL 119
Query: 130 TQEVL-PYIRKRNXXXXXXXXXXXXLA-PFKLLGAYSVSKTALLGLTKAVAQDLASENIR 187
T+E+ P +R+RN P + Y SK L+G +K++AQ++AS N+
Sbjct: 120 TRELTHPMMRRRNGRIINITSIVGVTGNPGQ--ANYCASKAGLIGFSKSLAQEIASRNVT 177
Query: 188 VNCLAPG 194
VNC+APG
Sbjct: 178 VNCIAPG 184
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 693 GGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVL-PYMRKK 744
GG+DILV+NA + + V S+ WD + VNL S F LT+E+ P MR++
Sbjct: 80 GGVDILVNNAGITR-DGLFVRMSDEDWDAVLTVNLTSVFNLTRELTHPMMRRR 131
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
Y SK L G +K +A+++A N+ VNC+APG I +
Sbjct: 153 YCASKAGLIGFSKSLAQEIASRNVTVNCIAPGFIES 188
>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
pdb|3ENN|B Chain B, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
pdb|3ENN|C Chain C, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
pdb|3ENN|D Chain D, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
Length = 249
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 137/248 (55%), Gaps = 11/248 (4%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L G+ A+VT ++ G+G AIA+ L +GA V + +E + + L E ++I
Sbjct: 8 LTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKE----LAAELGERIFVFPA 63
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
+++ +E + L + AE++ GG+DILV+NA + G V + WD + VN+ S F L
Sbjct: 64 NLSDREAVKALGQKAEEEMGGVDILVNNAGITR-DGLFVRMSDEDWDAVLTVNLTSVFNL 122
Query: 499 TQEVL-PYIRKRNXXXXXXXXXXXXLA-PFKLLGAYSVSKTALLGLTKAVAQDLASENIR 556
T+E+ P +R+RN P + Y SK L+G +K++AQ++AS N+
Sbjct: 123 TRELTHPMMRRRNGRIINITSIVGVTGNPGQ--ANYCASKAGLIGFSKSLAQEIASRNVT 180
Query: 557 VNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGE 616
VNC+APG ++ L E ++ + + N+PM R+ V ++ V +L SD+A+Y+TG+
Sbjct: 181 VNCIAPGFIESAMTGKLNEKQK--DAIMGNIPMKRMGVGADIAAAVVYLASDEAAYVTGQ 238
Query: 617 VIVAAGGM 624
+ GGM
Sbjct: 239 TLHVNGGM 246
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 105/187 (56%), Gaps = 9/187 (4%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
LTG+ A+VT ++ G+G AIA+ L A+GA V + +E + + L E ++I
Sbjct: 8 LTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKE----LAAELGERIFVFPA 63
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
+++ +E + L + AE++ GG+DILV+NA + G V + WD + VN+ S F L
Sbjct: 64 NLSDREAVKALGQKAEEEMGGVDILVNNAGITR-DGLFVRMSDEDWDAVLTVNLTSVFNL 122
Query: 130 TQEVL-PYIRKRNXXXXXXXXXXXXLA-PFKLLGAYSVSKTALLGLTKAVAQDLASENIR 187
T+E+ P +R+RN P + Y SK L+G +K++AQ++AS N+
Sbjct: 123 TRELTHPMMRRRNGRIINITSIVGVTGNPGQ--ANYCASKAGLIGFSKSLAQEIASRNVT 180
Query: 188 VNCLAPG 194
VNC+APG
Sbjct: 181 VNCIAPG 187
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 693 GGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVL-PYMRKK 744
GG+DILV+NA + + V S+ WD + VNL S F LT+E+ P MR++
Sbjct: 83 GGVDILVNNAGITR-DGLFVRMSDEDWDAVLTVNLTSVFNLTRELTHPMMRRR 134
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
Y SK L G +K +A+++A N+ VNC+APG I +
Sbjct: 156 YCASKAGLIGFSKSLAQEIASRNVTVNCIAPGFIESAM 193
>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92a) From Vibrio Cholerae
pdb|3TZK|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92a) From Vibrio Cholerae
Length = 251
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/246 (34%), Positives = 127/246 (51%), Gaps = 7/246 (2%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L GKVA+VT +S GIG AIA+ L+ GA V+ ++ ES + L G G+
Sbjct: 10 LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGK----GMAL 65
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
+V E + + + +FGG+DILV+NAA+ ++ E W I E N+ S F L
Sbjct: 66 NVTNPESIEAVLKAITDEFGGVDILVNNAAITRDN-LLMRMKEEEWSDIMETNLTSIFRL 124
Query: 499 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 558
++ VL + K+ Y+ +K ++G TK++A+++AS + VN
Sbjct: 125 SKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVN 184
Query: 559 CLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVI 618
+APG +T AL +E ++ VP GRL P E+ VAFL S +A+YITGE +
Sbjct: 185 TVAPGFIETDMTKAL--NDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETL 242
Query: 619 VAAGGM 624
GGM
Sbjct: 243 HVNGGM 248
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 94/185 (50%), Gaps = 5/185 (2%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L GKVA+VT +S GIG AIA+ L+ GA V+ ++ ES + L G G+
Sbjct: 10 LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGK----GMAL 65
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
+V E + + + +FGG+DILV+NAA+ ++ E W I E N+ S F L
Sbjct: 66 NVTNPESIEAVLKAITDEFGGVDILVNNAAITRDN-LLMRMKEEEWSDIMETNLTSIFRL 124
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
++ VL + K+ Y+ +K ++G TK++A+++AS + VN
Sbjct: 125 SKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVN 184
Query: 190 CLAPG 194
+APG
Sbjct: 185 TVAPG 189
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 688 TDKLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKKK 745
TD+ +GG+DILV+NAA+ N L+ E W I + NL S F L++ VL M KK+
Sbjct: 81 TDE-FGGVDILVNNAAITRDN-LLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKR 136
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
Y+ +K + G TK +A ++A + VN +APG I T
Sbjct: 158 YAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDM 195
>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase
(Fabg) From Vibrio Cholerae O1 Complexed With Nadp+
(Space Group P62)
pdb|3RSH|B Chain B, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase
(Fabg) From Vibrio Cholerae O1 Complexed With Nadp+
(Space Group P62)
pdb|3RRO|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg) From Vibrio Cholerae
pdb|3RRO|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg) From Vibrio Cholerae
pdb|4I08|A Chain A, Crystal Structure Of Beta-Ketoacyl-Acyl Carrier Protein
Reductase (Fabg) From Vibrio Cholerae In Complex With
Nadph
pdb|4I08|B Chain B, Crystal Structure Of Beta-Ketoacyl-Acyl Carrier Protein
Reductase (Fabg) From Vibrio Cholerae In Complex With
Nadph
Length = 251
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 126/246 (51%), Gaps = 7/246 (2%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L GKVA+VT +S GIG AIA+ L+ GA V+ ++ ES + L G G+
Sbjct: 10 LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGK----GMAL 65
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
+V E + + + +FGG+DILV+NA + ++ E W I E N+ S F L
Sbjct: 66 NVTNPESIEAVLKAITDEFGGVDILVNNAGITRDN-LLMRMKEEEWSDIMETNLTSIFRL 124
Query: 499 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 558
++ VL + K+ Y+ +K ++G TK++A+++AS + VN
Sbjct: 125 SKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVN 184
Query: 559 CLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVI 618
+APG +T AL +E ++ VP GRL P E+ VAFL S +A+YITGE +
Sbjct: 185 TVAPGFIETDMTKAL--NDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETL 242
Query: 619 VAAGGM 624
GGM
Sbjct: 243 HVNGGM 248
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 93/185 (50%), Gaps = 5/185 (2%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L GKVA+VT +S GIG AIA+ L+ GA V+ ++ ES + L G G+
Sbjct: 10 LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGK----GMAL 65
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
+V E + + + +FGG+DILV+NA + ++ E W I E N+ S F L
Sbjct: 66 NVTNPESIEAVLKAITDEFGGVDILVNNAGITRDN-LLMRMKEEEWSDIMETNLTSIFRL 124
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
++ VL + K+ Y+ +K ++G TK++A+++AS + VN
Sbjct: 125 SKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVN 184
Query: 190 CLAPG 194
+APG
Sbjct: 185 TVAPG 189
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 688 TDKLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKKK 745
TD+ +GG+DILV+NA + N L+ E W I + NL S F L++ VL M KK+
Sbjct: 81 TDE-FGGVDILVNNAGITRDN-LLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKR 136
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
Y+ +K + G TK +A ++A + VN +APG I T
Sbjct: 158 YAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDM 195
>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose Reveals The Structure Bases Of Its Catalytic
Mechanism And High Substrate Selectivity
pdb|3AI1|B Chain B, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose Reveals The Structure Bases Of Its Catalytic
Mechanism And High Substrate Selectivity
pdb|3AI2|A Chain A, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|B Chain B, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|H Chain H, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|D Chain D, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|E Chain E, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|C Chain C, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|F Chain F, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|G Chain G, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
Length = 263
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 131/260 (50%), Gaps = 11/260 (4%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
++GKVAV+T SS GIG AIA+ + EGA +V+ +R+ +++A +L+++ ++ V
Sbjct: 5 ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAV 64
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
VA E + E FGG DILV+NA + ++E + W +E++V + L
Sbjct: 65 DVATPEGVDAVVESVRSSFGGADILVNNAGTG-SNETIMEAADEKWQFYWELHVMAAVRL 123
Query: 499 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 558
+ ++P +R R + P Y+V+K AL+ +K +A ++ +NIRVN
Sbjct: 124 ARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVN 183
Query: 559 CLAPGITKT----KFAAALYETEEA------HEIAVSNVPMGRLAVPDEMGGIVAFLCSD 608
C+ PG+ T K A L + +A + P+ R A P+E+ FLCS+
Sbjct: 184 CINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLCSE 243
Query: 609 DASYITGEVIVAAGGMQSRL 628
A+Y G GGM L
Sbjct: 244 RATYSVGSAYFVDGGMLKTL 263
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 102/186 (54%), Gaps = 1/186 (0%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
++GKVAV+T SS GIG AIA+ + EGA +V+ +R+ +++A +L+++ ++ V
Sbjct: 5 ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAV 64
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
VA E + E FGG DILV+NA + ++E + W +E++V + L
Sbjct: 65 DVATPEGVDAVVESVRSSFGGADILVNNAGTG-SNETIMEAADEKWQFYWELHVMAAVRL 123
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
+ ++P +R R + P Y+V+K AL+ +K +A ++ +NIRVN
Sbjct: 124 ARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVN 183
Query: 190 CLAPGI 195
C+ PG+
Sbjct: 184 CINPGL 189
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
Y+V+K AL +K +A ++ +NIRVNC+ PGLI T
Sbjct: 157 YNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILT 192
Score = 35.8 bits (81), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 692 YGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKK 744
+GG DILV+NA +NE ++E ++ W +++++ ++ L + ++P MR +
Sbjct: 83 FGGADILVNNAGTG-SNETIMEAADEKWQFYWELHVMAAVRLARGLVPGMRAR 134
>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92d) From Vibrio Cholerae
pdb|3U09|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92d) From Vibrio Cholerae
Length = 251
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 126/246 (51%), Gaps = 7/246 (2%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L GKVA+VT +S GIG AIA+ L+ GA V+ ++ ES + L G G+
Sbjct: 10 LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGK----GMAL 65
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
+V E + + + +FGG+DILV+NA + ++ E W I E N+ S F L
Sbjct: 66 NVTNPESIEAVLKAITDEFGGVDILVNNADITRDN-LLMRMKEEEWSDIMETNLTSIFRL 124
Query: 499 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 558
++ VL + K+ Y+ +K ++G TK++A+++AS + VN
Sbjct: 125 SKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVN 184
Query: 559 CLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVI 618
+APG +T AL +E ++ VP GRL P E+ VAFL S +A+YITGE +
Sbjct: 185 TVAPGFIETDMTKAL--NDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETL 242
Query: 619 VAAGGM 624
GGM
Sbjct: 243 HVNGGM 248
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 93/185 (50%), Gaps = 5/185 (2%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L GKVA+VT +S GIG AIA+ L+ GA V+ ++ ES + L G G+
Sbjct: 10 LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGK----GMAL 65
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
+V E + + + +FGG+DILV+NA + ++ E W I E N+ S F L
Sbjct: 66 NVTNPESIEAVLKAITDEFGGVDILVNNADITRDN-LLMRMKEEEWSDIMETNLTSIFRL 124
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
++ VL + K+ Y+ +K ++G TK++A+++AS + VN
Sbjct: 125 SKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVN 184
Query: 190 CLAPG 194
+APG
Sbjct: 185 TVAPG 189
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 688 TDKLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKKK 745
TD+ +GG+DILV+NA + N L+ E W I + NL S F L++ VL M KK+
Sbjct: 81 TDE-FGGVDILVNNADITRDN-LLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKR 136
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
Y+ +K + G TK +A ++A + VN +APG I T
Sbjct: 158 YAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDM 195
>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|E Chain E, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|F Chain F, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
Length = 251
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 126/246 (51%), Gaps = 7/246 (2%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L GKVA+VT +S GIG AIA+ L+ GA V+ ++ ES + L G G+
Sbjct: 10 LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGK----GMAL 65
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
+V E + + + +FGG+DILV+NA + ++ E W I E N+ S F L
Sbjct: 66 NVTNPESIEAVLKAITDEFGGVDILVNNAGITRDN-LLMRMKEEEWSDIMETNLTSIFRL 124
Query: 499 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 558
++ VL + K+ Y+ +K ++G TK++A+++AS + VN
Sbjct: 125 SKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVN 184
Query: 559 CLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVI 618
+APG +T AL +E ++ VP GRL P E+ VAFL S +A+YITGE +
Sbjct: 185 TVAPGAIETDMTKAL--NDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETL 242
Query: 619 VAAGGM 624
GGM
Sbjct: 243 HVNGGM 248
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 93/185 (50%), Gaps = 5/185 (2%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L GKVA+VT +S GIG AIA+ L+ GA V+ ++ ES + L G G+
Sbjct: 10 LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGK----GMAL 65
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
+V E + + + +FGG+DILV+NA + ++ E W I E N+ S F L
Sbjct: 66 NVTNPESIEAVLKAITDEFGGVDILVNNAGITRDN-LLMRMKEEEWSDIMETNLTSIFRL 124
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
++ VL + K+ Y+ +K ++G TK++A+++AS + VN
Sbjct: 125 SKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVN 184
Query: 190 CLAPG 194
+APG
Sbjct: 185 TVAPG 189
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 688 TDKLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKKK 745
TD+ +GG+DILV+NA + N L+ E W I + NL S F L++ VL M KK+
Sbjct: 81 TDE-FGGVDILVNNAGITRDN-LLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKR 136
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
Y+ +K + G TK +A ++A + VN +APG I T
Sbjct: 158 YAAAKAGVIGFTKSMAREVASRGVTVNTVAPGAIETDM 195
>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
Length = 251
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 126/246 (51%), Gaps = 7/246 (2%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L GKVA+VT +S GIG AIA+ L+ GA V+ ++ ES + L G G+
Sbjct: 10 LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGK----GMAL 65
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
+V E + + + +FGG+DILV+NA + ++ E W I E N+ S F L
Sbjct: 66 NVTNPESIEAVLKAITDEFGGVDILVNNAGITRDN-LLMRMKEEEWSDIMETNLTSIFRL 124
Query: 499 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 558
++ VL + K+ ++ +K ++G TK++A+++AS + VN
Sbjct: 125 SKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANFAAAKAGVIGFTKSMAREVASRGVTVN 184
Query: 559 CLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVI 618
+APG +T AL +E ++ VP GRL P E+ VAFL S +A+YITGE +
Sbjct: 185 TVAPGFIETDMTKAL--NDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETL 242
Query: 619 VAAGGM 624
GGM
Sbjct: 243 HVNGGM 248
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 93/185 (50%), Gaps = 5/185 (2%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L GKVA+VT +S GIG AIA+ L+ GA V+ ++ ES + L G G+
Sbjct: 10 LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGK----GMAL 65
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
+V E + + + +FGG+DILV+NA + ++ E W I E N+ S F L
Sbjct: 66 NVTNPESIEAVLKAITDEFGGVDILVNNAGITRDN-LLMRMKEEEWSDIMETNLTSIFRL 124
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
++ VL + K+ ++ +K ++G TK++A+++AS + VN
Sbjct: 125 SKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANFAAAKAGVIGFTKSMAREVASRGVTVN 184
Query: 190 CLAPG 194
+APG
Sbjct: 185 TVAPG 189
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 688 TDKLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKKK 745
TD+ +GG+DILV+NA + N L+ E W I + NL S F L++ VL M KK+
Sbjct: 81 TDE-FGGVDILVNNAGITRDN-LLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKR 136
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
++ +K + G TK +A ++A + VN +APG I T
Sbjct: 158 FAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDM 195
>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose
pdb|3AI3|C Chain C, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose
pdb|3AI3|E Chain E, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose
pdb|3AI3|G Chain G, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose
Length = 263
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 130/260 (50%), Gaps = 11/260 (4%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
++GKVAV+T SS GIG AIA+ + EGA +V+ +R+ +++A +L+++ ++ V
Sbjct: 5 ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAV 64
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
VA E + E FGG DILV+NA + ++E + W +E+ V + L
Sbjct: 65 DVATPEGVDAVVESVRSSFGGADILVNNAGTG-SNETIMEAADEKWQFYWELLVMAAVRL 123
Query: 499 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 558
+ ++P +R R + P Y+V+K AL+ +K +A ++ +NIRVN
Sbjct: 124 ARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVN 183
Query: 559 CLAPGITKT----KFAAALYETEEA------HEIAVSNVPMGRLAVPDEMGGIVAFLCSD 608
C+ PG+ T K A L + +A + P+ R A P+E+ FLCS+
Sbjct: 184 CINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLCSE 243
Query: 609 DASYITGEVIVAAGGMQSRL 628
A+Y G GGM L
Sbjct: 244 RATYSVGSAYFVDGGMLKTL 263
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 101/186 (54%), Gaps = 1/186 (0%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
++GKVAV+T SS GIG AIA+ + EGA +V+ +R+ +++A +L+++ ++ V
Sbjct: 5 ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAV 64
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
VA E + E FGG DILV+NA + ++E + W +E+ V + L
Sbjct: 65 DVATPEGVDAVVESVRSSFGGADILVNNAGTG-SNETIMEAADEKWQFYWELLVMAAVRL 123
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
+ ++P +R R + P Y+V+K AL+ +K +A ++ +NIRVN
Sbjct: 124 ARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVN 183
Query: 190 CLAPGI 195
C+ PG+
Sbjct: 184 CINPGL 189
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
Y+V+K AL +K +A ++ +NIRVNC+ PGLI T
Sbjct: 157 YNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILT 192
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 692 YGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKK 744
+GG DILV+NA +NE ++E ++ W +++ + ++ L + ++P MR +
Sbjct: 83 FGGADILVNNAGTG-SNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRAR 134
>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations
(Q252l And E170k) Of Glucose Dehydrogenase From Bacillus
Megaterium Iwg3 For The Stabilization Of Oligomeric
State
pdb|1RWB|B Chain B, Cooperative Effect Of Two Surface Amino Acid Mutations
(Q252l And E170k) Of Glucose Dehydrogenase From Bacillus
Megaterium Iwg3 For The Stabilization Of Oligomeric
State
pdb|1RWB|E Chain E, Cooperative Effect Of Two Surface Amino Acid Mutations
(Q252l And E170k) Of Glucose Dehydrogenase From Bacillus
Megaterium Iwg3 For The Stabilization Of Oligomeric
State
pdb|1RWB|F Chain F, Cooperative Effect Of Two Surface Amino Acid Mutations
(Q252l And E170k) Of Glucose Dehydrogenase From Bacillus
Megaterium Iwg3 For The Stabilization Of Oligomeric
State
Length = 261
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 132/249 (53%), Gaps = 6/249 (2%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSR-KESNVNKAVETLQKEGHQKISGVV 437
L GKV V+T SS G+G ++A R +TE A VV++ R KE N +E ++K G + I+ V
Sbjct: 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIA-VK 63
Query: 438 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAV-NPATGPVVECPENVWDKIFEVNVKSTF 496
V + D L + A K+FG +D++++NA + NP + + + W+K+ + N+ F
Sbjct: 64 GDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSD--WNKVIDTNLTGAF 121
Query: 497 LLTQEVLPYIRKRNXX-XXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 555
L ++E + Y + + P+ L Y+ SK + +TK +A + A + I
Sbjct: 122 LGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTKTLALEYAPKGI 181
Query: 556 RVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITG 615
RVN + PG T A + E S +PMG + P+E+ + A+L S +ASY+TG
Sbjct: 182 RVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTG 241
Query: 616 EVIVAAGGM 624
+ A GGM
Sbjct: 242 ITLFADGGM 250
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 100/188 (53%), Gaps = 6/188 (3%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSR-KESNVNKAVETLQKEGHQKISGVV 68
L GKV V+T SS G+G ++A R + E A VV++ R KE N +E ++K G + I+ V
Sbjct: 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIA-VK 63
Query: 69 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAV-NPATGPVVECPENVWDKIFEVNVKSTF 127
V + D L + A K+FG +D++++NA + NP + + + W+K+ + N+ F
Sbjct: 64 GDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSD--WNKVIDTNLTGAF 121
Query: 128 LLTQEVLPYIRKRNXX-XXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 186
L ++E + Y + + P+ L Y+ SK + +TK +A + A + I
Sbjct: 122 LGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTKTLALEYAPKGI 181
Query: 187 RVNCLAPG 194
RVN + PG
Sbjct: 182 RVNNIGPG 189
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 687 STDKLYGGIDILVSNAAV-NPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYM 741
S K +G +D++++NA + NP + + S+ W+K+ D NL +FL ++E + Y
Sbjct: 78 SAIKEFGKLDVMINNAGLENPVSSHEMSLSD--WNKVIDTNLTGAFLGSREAIKYF 131
Score = 35.8 bits (81), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT-----KFGD 680
Y+ SK + +TK +A + AP+ IRVN + PG I T KF D
Sbjct: 158 YAASKGGMKLMTKTLALEYAPKGIRVNNIGPGAINTPINAEKFAD 202
>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EW8|B Chain B, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EW8|C Chain C, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EW8|D Chain D, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EWM|A Chain A, Crystal Structure Of The (S)-Specific 1-Phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EWM|B Chain B, Crystal Structure Of The (S)-Specific 1-Phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
Length = 249
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 126/250 (50%), Gaps = 10/250 (4%)
Query: 378 RLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKES-NVNKAVETLQKEGHQKISGV 436
RL K+AV+T ++GIG AIA+R + EGA + I+ + A+ L + ++ V
Sbjct: 4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGR----RVLTV 59
Query: 437 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 496
C V++ D + + FG DILV+NA + P P E W K FE+NV S F
Sbjct: 60 KCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLI-PFDELTFEQWKKTFEINVDSGF 118
Query: 497 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 556
L+ + +P +++ + Y +K A +G T+A+A DL + I
Sbjct: 119 LMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGIT 178
Query: 557 VNCLAPGI--TKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYIT 614
VN +AP + T T A+AL + + +P RL VP ++ G AFL SDDAS+IT
Sbjct: 179 VNAIAPSLVRTATTEASALSAMFDVLPNMLQAIP--RLQVPLDLTGAAAFLASDDASFIT 236
Query: 615 GEVIVAAGGM 624
G+ + GGM
Sbjct: 237 GQTLAVDGGM 246
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 92/188 (48%), Gaps = 6/188 (3%)
Query: 9 RLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKES-NVNKAVETLQKEGHQKISGV 67
RL K+AV+T ++GIG AIA+R + EGA + I+ + A+ L + ++ V
Sbjct: 4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGR----RVLTV 59
Query: 68 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 127
C V++ D + + FG DILV+NA + P P E W K FE+NV S F
Sbjct: 60 KCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLI-PFDELTFEQWKKTFEINVDSGF 118
Query: 128 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 187
L+ + +P +++ + Y +K A +G T+A+A DL + I
Sbjct: 119 LMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGIT 178
Query: 188 VNCLAPGI 195
VN +AP +
Sbjct: 179 VNAIAPSL 186
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 664 IRVNCLAPGLIRTKFGDRMIAMLSTDKLYGGIDILVSNAAVNPANEPLVECSEVVWDKIF 723
++ + PG + FG ++I+ +G DILV+NA + P P E + W K F
Sbjct: 59 VKCDVSQPGDVEA-FGKQVIST------FGRCDILVNNAGIYPL-IPFDELTFEQWKKTF 110
Query: 724 DVNLKSSFLLTQEVLPYMRK 743
++N+ S FL+ + +P M++
Sbjct: 111 EINVDSGFLMAKAFVPGMKR 130
Score = 36.2 bits (82), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
Y +K A G T+ +A DL + I VN +AP L+RT
Sbjct: 154 YISTKAANIGFTRALASDLGKDGITVNAIAPSLVRT 189
>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
pdb|3GRP|B Chain B, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
pdb|3GRP|C Chain C, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
pdb|3GRP|D Chain D, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
Length = 266
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 130/250 (52%), Gaps = 13/250 (5%)
Query: 378 RLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVV 437
+L G+ A+VT ++ GIG AIA+ +GA V + +E + + L K+ V
Sbjct: 24 KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKD-------VF 76
Query: 438 CHVAKKEDRQ---KLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKS 494
A DR+ +L E AE++ GIDILV+NA + G V + WD + VN+ +
Sbjct: 77 VFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGITR-DGLFVRMQDQDWDDVLAVNLTA 135
Query: 495 TFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASEN 554
LT+E++ + +R + Y +K L+G +KA+AQ++AS N
Sbjct: 136 ASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIASRN 195
Query: 555 IRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYIT 614
I VNC+APG K+ L E ++ E ++ +PM R+ + +E+ +L SD+A+Y+T
Sbjct: 196 ITVNCIAPGFIKSAMTDKLNEKQK--EAIMAMIPMKRMGIGEEIAFATVYLASDEAAYLT 253
Query: 615 GEVIVAAGGM 624
G+ + GGM
Sbjct: 254 GQTLHINGGM 263
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 98/189 (51%), Gaps = 11/189 (5%)
Query: 9 RLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVV 68
+LTG+ A+VT ++ GIG AIA+ A+GA V + +E + + L K+ V
Sbjct: 24 KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKD-------VF 76
Query: 69 CHVAKKEDRQ---KLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKS 125
A DR+ +L E AE++ GIDILV+NA + G V + WD + VN+ +
Sbjct: 77 VFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGITR-DGLFVRMQDQDWDDVLAVNLTA 135
Query: 126 TFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASEN 185
LT+E++ + +R + Y +K L+G +KA+AQ++AS N
Sbjct: 136 ASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIASRN 195
Query: 186 IRVNCLAPG 194
I VNC+APG
Sbjct: 196 ITVNCIAPG 204
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 28/42 (66%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGDRM 682
Y +K L G +K +A+++A NI VNC+APG I++ D++
Sbjct: 173 YCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKL 214
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 694 GIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKKK 745
GIDILV+NA + + V + WD + VNL ++ LT+E++ M +++
Sbjct: 101 GIDILVNNAGITR-DGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRR 151
>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l
Complexed With Nad+
pdb|1GEE|B Chain B, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l
Complexed With Nad+
pdb|1GEE|E Chain E, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l
Complexed With Nad+
pdb|1GEE|F Chain F, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l
Complexed With Nad+
Length = 261
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 132/249 (53%), Gaps = 6/249 (2%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSR-KESNVNKAVETLQKEGHQKISGVV 437
L GKV V+T SS G+G ++A R +TE A VV++ R KE N +E ++K G + I+ V
Sbjct: 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIA-VK 63
Query: 438 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAV-NPATGPVVECPENVWDKIFEVNVKSTF 496
V + D L + A K+FG +D++++NA + NP + + + W+K+ + N+ F
Sbjct: 64 GDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSD--WNKVIDTNLTGAF 121
Query: 497 LLTQEVLPYIRKRNXX-XXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 555
L ++E + Y + + P+ L Y+ SK + +T+ +A + A + I
Sbjct: 122 LGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGI 181
Query: 556 RVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITG 615
RVN + PG T A + E S +PMG + P+E+ + A+L S +ASY+TG
Sbjct: 182 RVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTG 241
Query: 616 EVIVAAGGM 624
+ A GGM
Sbjct: 242 ITLFADGGM 250
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 100/188 (53%), Gaps = 6/188 (3%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSR-KESNVNKAVETLQKEGHQKISGVV 68
L GKV V+T SS G+G ++A R + E A VV++ R KE N +E ++K G + I+ V
Sbjct: 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIA-VK 63
Query: 69 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAV-NPATGPVVECPENVWDKIFEVNVKSTF 127
V + D L + A K+FG +D++++NA + NP + + + W+K+ + N+ F
Sbjct: 64 GDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSD--WNKVIDTNLTGAF 121
Query: 128 LLTQEVLPYIRKRNXX-XXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 186
L ++E + Y + + P+ L Y+ SK + +T+ +A + A + I
Sbjct: 122 LGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGI 181
Query: 187 RVNCLAPG 194
RVN + PG
Sbjct: 182 RVNNIGPG 189
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 687 STDKLYGGIDILVSNAAV-NPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYM 741
S K +G +D++++NA + NP + + S+ W+K+ D NL +FL ++E + Y
Sbjct: 78 SAIKEFGKLDVMINNAGLENPVSSHEMSLSD--WNKVIDTNLTGAFLGSREAIKYF 131
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT-----KFGD 680
Y+ SK + +T+ +A + AP+ IRVN + PG I T KF D
Sbjct: 158 YAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFAD 202
>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With
Nad+
pdb|1GCO|B Chain B, Crystal Structure Of Glucose Dehydrogenase Complexed With
Nad+
pdb|1GCO|E Chain E, Crystal Structure Of Glucose Dehydrogenase Complexed With
Nad+
pdb|1GCO|F Chain F, Crystal Structure Of Glucose Dehydrogenase Complexed With
Nad+
Length = 261
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 132/249 (53%), Gaps = 6/249 (2%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSR-KESNVNKAVETLQKEGHQKISGVV 437
L GKV V+T SS G+G ++A R +TE A VV++ R KE N +E ++K G + I+ V
Sbjct: 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIA-VK 63
Query: 438 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAV-NPATGPVVECPENVWDKIFEVNVKSTF 496
V + D L + A K+FG +D++++NA + NP + + + W+K+ + N+ F
Sbjct: 64 GDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSD--WNKVIDTNLTGAF 121
Query: 497 LLTQEVLPYIRKRNXX-XXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 555
L ++E + Y + + P+ L Y+ SK + +T+ +A + A + I
Sbjct: 122 LGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGI 181
Query: 556 RVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITG 615
RVN + PG T A + E S +PMG + P+E+ + A+L S +ASY+TG
Sbjct: 182 RVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTG 241
Query: 616 EVIVAAGGM 624
+ A GGM
Sbjct: 242 ITLFADGGM 250
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 100/188 (53%), Gaps = 6/188 (3%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSR-KESNVNKAVETLQKEGHQKISGVV 68
L GKV V+T SS G+G ++A R + E A VV++ R KE N +E ++K G + I+ V
Sbjct: 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIA-VK 63
Query: 69 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAV-NPATGPVVECPENVWDKIFEVNVKSTF 127
V + D L + A K+FG +D++++NA + NP + + + W+K+ + N+ F
Sbjct: 64 GDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSD--WNKVIDTNLTGAF 121
Query: 128 LLTQEVLPYIRKRNXX-XXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 186
L ++E + Y + + P+ L Y+ SK + +T+ +A + A + I
Sbjct: 122 LGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGI 181
Query: 187 RVNCLAPG 194
RVN + PG
Sbjct: 182 RVNNIGPG 189
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 687 STDKLYGGIDILVSNAAV-NPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYM 741
S K +G +D++++NA + NP + + S+ W+K+ D NL +FL ++E + Y
Sbjct: 78 SAIKEFGKLDVMINNAGLENPVSSHEMSLSD--WNKVIDTNLTGAFLGSREAIKYF 131
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT-----KFGD 680
Y+ SK + +T+ +A + AP+ IRVN + PG I T KF D
Sbjct: 158 YAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFAD 202
>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a
Complexed With Nad+
pdb|1G6K|B Chain B, Crystal Structure Of Glucose Dehydrogenase Mutant E96a
Complexed With Nad+
pdb|1G6K|E Chain E, Crystal Structure Of Glucose Dehydrogenase Mutant E96a
Complexed With Nad+
pdb|1G6K|F Chain F, Crystal Structure Of Glucose Dehydrogenase Mutant E96a
Complexed With Nad+
Length = 261
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 132/249 (53%), Gaps = 6/249 (2%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSR-KESNVNKAVETLQKEGHQKISGVV 437
L GKV V+T SS G+G ++A R +TE A VV++ R KE N +E ++K G + I+ V
Sbjct: 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIA-VK 63
Query: 438 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAV-NPATGPVVECPENVWDKIFEVNVKSTF 496
V + D L + A K+FG +D++++NA + NP + + + W+K+ + N+ F
Sbjct: 64 GDVTVESDVINLVQSAIKEFGKLDVMINNAGLANPVSSHEMSLSD--WNKVIDTNLTGAF 121
Query: 497 LLTQEVLPYIRKRNXX-XXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 555
L ++E + Y + + P+ L Y+ SK + +T+ +A + A + I
Sbjct: 122 LGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGI 181
Query: 556 RVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITG 615
RVN + PG T A + E S +PMG + P+E+ + A+L S +ASY+TG
Sbjct: 182 RVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTG 241
Query: 616 EVIVAAGGM 624
+ A GGM
Sbjct: 242 ITLFADGGM 250
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 100/188 (53%), Gaps = 6/188 (3%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSR-KESNVNKAVETLQKEGHQKISGVV 68
L GKV V+T SS G+G ++A R + E A VV++ R KE N +E ++K G + I+ V
Sbjct: 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIA-VK 63
Query: 69 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAV-NPATGPVVECPENVWDKIFEVNVKSTF 127
V + D L + A K+FG +D++++NA + NP + + + W+K+ + N+ F
Sbjct: 64 GDVTVESDVINLVQSAIKEFGKLDVMINNAGLANPVSSHEMSLSD--WNKVIDTNLTGAF 121
Query: 128 LLTQEVLPYIRKRNXX-XXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 186
L ++E + Y + + P+ L Y+ SK + +T+ +A + A + I
Sbjct: 122 LGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGI 181
Query: 187 RVNCLAPG 194
RVN + PG
Sbjct: 182 RVNNIGPG 189
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 687 STDKLYGGIDILVSNAAV-NPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYM 741
S K +G +D++++NA + NP + + S+ W+K+ D NL +FL ++E + Y
Sbjct: 78 SAIKEFGKLDVMINNAGLANPVSSHEMSLSD--WNKVIDTNLTGAFLGSREAIKYF 131
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT-----KFGD 680
Y+ SK + +T+ +A + AP+ IRVN + PG I T KF D
Sbjct: 158 YAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFAD 202
>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From
Arabidopsis Thaliana Gene At1g07440
pdb|2Q45|A Chain A, Ensemble Refinement Of The Protein Crystal Structure Of
Putative Tropinone Reductase From Arabidopsis Thaliana
Gene At1g07440
Length = 266
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 127/247 (51%), Gaps = 4/247 (1%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L K +VT + GIG AI + + GA + +R E +N+ + QK+G Q ++G VC
Sbjct: 12 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQ-VTGSVC 70
Query: 439 HVAKKEDRQKLFEHAEKKFGG-IDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 497
+ + +R+KL + FGG +DIL++N + P ++ + N++S +
Sbjct: 71 DASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSK-PTLDYTAEDFSFHISTNLESAYH 129
Query: 498 LTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 557
L+Q P ++ + + YS +K AL L + +A + AS+ IR
Sbjct: 130 LSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRA 189
Query: 558 NCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEV 617
N +AP + T A A+Y+ +E ++ +S P+GR P+E+ +VAFLC ASYITG+
Sbjct: 190 NAVAPAVIATPLAEAVYD-DEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYITGQT 248
Query: 618 IVAAGGM 624
I GG+
Sbjct: 249 ICVDGGL 255
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 90/187 (48%), Gaps = 3/187 (1%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L K +VT + GIG AI + + GA + +R E +N+ + QK+G Q ++G VC
Sbjct: 12 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQ-VTGSVC 70
Query: 70 HVAKKEDRQKLFEHAEKKFGG-IDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 128
+ + +R+KL + FGG +DIL++N + P ++ + N++S +
Sbjct: 71 DASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSK-PTLDYTAEDFSFHISTNLESAYH 129
Query: 129 LTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 188
L+Q P ++ + + YS +K AL L + +A + AS+ IR
Sbjct: 130 LSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRA 189
Query: 189 NCLAPGI 195
N +AP +
Sbjct: 190 NAVAPAV 196
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGD 680
YS +K AL L + +A + A + IR N +AP +I T +
Sbjct: 164 YSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAE 203
>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus
Thermophilus Hb8
pdb|2EKP|A Chain A, Structure Of Tt0495 Protein From Thermus Thermophilus
pdb|2EKQ|A Chain A, Structure Of Tt0495 Protein From Thermus Thermophilus
pdb|2EKQ|B Chain B, Structure Of Tt0495 Protein From Thermus Thermophilus
pdb|2EKQ|C Chain C, Structure Of Tt0495 Protein From Thermus Thermophilus
pdb|2EKQ|D Chain D, Structure Of Tt0495 Protein From Thermus Thermophilus
Length = 239
Score = 123 bits (309), Expect = 3e-28, Method: Composition-based stats.
Identities = 82/244 (33%), Positives = 123/244 (50%), Gaps = 17/244 (6%)
Query: 384 AVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHV-AK 442
A+VT S GIG AIA+ L G V I+SR +E Q + V +
Sbjct: 5 ALVTGGSRGIGRAIAEALVARGYRVAIASRNP-----------EEAAQSLGAVPLPTDLE 53
Query: 443 KEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQEV 502
K+D + L + A + GG+ +LV AAVN P +E W ++ +++ FLL Q
Sbjct: 54 KDDPKGLVKRALEALGGLHVLVHAAAVN-VRKPALELSYEEWRRVLYLHLDVAFLLAQAA 112
Query: 503 LPYIRKRNXXXXXXXXXXXXL---APFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNC 559
P++ + P + AY+ +KTALLGLT+A+A++ A IRVN
Sbjct: 113 APHMAEAGWGRVLFIGSVTTFTAGGPVPI-PAYTTAKTALLGLTRALAKEWARLGIRVNL 171
Query: 560 LAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVIV 619
L PG +T+F L + E +E + +PMGR A P+E+ + A LC D+A Y+TG+ +
Sbjct: 172 LCPGYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGDEAEYLTGQAVA 231
Query: 620 AAGG 623
GG
Sbjct: 232 VDGG 235
Score = 77.8 bits (190), Expect = 2e-14, Method: Composition-based stats.
Identities = 61/184 (33%), Positives = 89/184 (48%), Gaps = 17/184 (9%)
Query: 15 AVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHV-AK 73
A+VT S GIG AIA+ L A G V I+SR +E Q + V +
Sbjct: 5 ALVTGGSRGIGRAIAEALVARGYRVAIASRNP-----------EEAAQSLGAVPLPTDLE 53
Query: 74 KEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQEV 133
K+D + L + A + GG+ +LV AAVN P +E W ++ +++ FLL Q
Sbjct: 54 KDDPKGLVKRALEALGGLHVLVHAAAVN-VRKPALELSYEEWRRVLYLHLDVAFLLAQAA 112
Query: 134 LPYIRKRNXXXXXXXXXXXXL---APFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNC 190
P++ + P + AY+ +KTALLGLT+A+A++ A IRVN
Sbjct: 113 APHMAEAGWGRVLFIGSVTTFTAGGPVPI-PAYTTAKTALLGLTRALAKEWARLGIRVNL 171
Query: 191 LAPG 194
L PG
Sbjct: 172 LCPG 175
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 638 IGAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
I AY+ +KTAL GLT+ +A++ A IRVN L PG + T+F
Sbjct: 141 IPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEF 181
Score = 36.6 bits (83), Expect = 0.057, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 693 GGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYM 741
GG+ +LV AAVN +P +E S W ++ ++L +FLL Q P+M
Sbjct: 69 GGLHVLVHAAAVN-VRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHM 116
>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|B Chain B, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|C Chain C, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|D Chain D, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|E Chain E, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|F Chain F, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|G Chain G, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|H Chain H, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1Q7B|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
pdb|1Q7B|B Chain B, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
pdb|1Q7B|C Chain C, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
pdb|1Q7B|D Chain D, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
Length = 244
Score = 122 bits (305), Expect = 9e-28, Method: Composition-based stats.
Identities = 79/244 (32%), Positives = 126/244 (51%), Gaps = 7/244 (2%)
Query: 381 GKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHV 440
GK+A+VT +S GIG AIA+ L+ GA V+ ++ E+ + L G G++ +V
Sbjct: 5 GKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANG----KGLMLNV 60
Query: 441 AKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQ 500
+ + E +FG +DILV+NA + ++ + W+ I E N+ S F L++
Sbjct: 61 TDPASIESVLEKIRAEFGEVDILVNNAGIT-RDNLLMRMKDEEWNDIIETNLSSVFRLSK 119
Query: 501 EVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCL 560
V+ + K+ Y+ +K L+G +K++A+++AS I VN +
Sbjct: 120 AVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVV 179
Query: 561 APGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVIVA 620
APG +T AL + + A +A VP GRL E+ VAFL SD+A+YITGE +
Sbjct: 180 APGFIETDMTRALSDDQRAGILA--QVPAGRLGGAQEIANAVAFLASDEAAYITGETLHV 237
Query: 621 AGGM 624
GGM
Sbjct: 238 NGGM 241
Score = 83.6 bits (205), Expect = 4e-16, Method: Composition-based stats.
Identities = 54/183 (29%), Positives = 93/183 (50%), Gaps = 5/183 (2%)
Query: 12 GKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHV 71
GK+A+VT +S GIG AIA+ L+A GA V+ ++ E+ + L G G++ +V
Sbjct: 5 GKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANG----KGLMLNV 60
Query: 72 AKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQ 131
+ + E +FG +DILV+NA + ++ + W+ I E N+ S F L++
Sbjct: 61 TDPASIESVLEKIRAEFGEVDILVNNAGIT-RDNLLMRMKDEEWNDIIETNLSSVFRLSK 119
Query: 132 EVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCL 191
V+ + K+ Y+ +K L+G +K++A+++AS I VN +
Sbjct: 120 AVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVV 179
Query: 192 APG 194
APG
Sbjct: 180 APG 182
Score = 37.0 bits (84), Expect = 0.037, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 692 YGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKKK 745
+G +DILV+NA + N L+ + W+ I + NL S F L++ V+ M KK+
Sbjct: 77 FGEVDILVNNAGITRDNL-LMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKR 129
>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|B Chain B, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|C Chain C, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|D Chain D, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|E Chain E, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|F Chain F, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|G Chain G, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|H Chain H, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
Length = 246
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 124/247 (50%), Gaps = 5/247 (2%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVIS-SRKESNVNKAVETLQKEGHQKISGVV 437
L GKVA+VT +S GIG AIA L+ +GA+VV++ + E N+ V+ ++K G I+ V
Sbjct: 2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIA-VR 60
Query: 438 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 497
VA ED + + FG +DILV+NA V ++ E WD + N+K FL
Sbjct: 61 ADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTK-DNLLMRMKEEEWDTVINTNLKGVFL 119
Query: 498 LTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 557
T+ V ++ ++ + Y +K ++GLTK A++LAS NI V
Sbjct: 120 CTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNITV 179
Query: 558 NCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEV 617
N +APG T L E +A + + +P + ++ V F SD + YITG+
Sbjct: 180 NAIAPGFIATDMTDVLDENIKAEMLKL--IPAAQFGEAQDIANAVTFFASDQSKYITGQT 237
Query: 618 IVAAGGM 624
+ GGM
Sbjct: 238 LNVDGGM 244
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 98/186 (52%), Gaps = 3/186 (1%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVIS-SRKESNVNKAVETLQKEGHQKISGVV 68
L GKVA+VT +S GIG AIA L+ +GA+VV++ + E N+ V+ ++K G I+ V
Sbjct: 2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIA-VR 60
Query: 69 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 128
VA ED + + FG +DILV+NA V ++ E WD + N+K FL
Sbjct: 61 ADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTK-DNLLMRMKEEEWDTVINTNLKGVFL 119
Query: 129 LTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 188
T+ V ++ ++ + Y +K ++GLTK A++LAS NI V
Sbjct: 120 CTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNITV 179
Query: 189 NCLAPG 194
N +APG
Sbjct: 180 NAIAPG 185
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 688 TDKLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKKK 745
T ++G +DILV+NA V N L+ E WD + + NLK FL T+ V +M +++
Sbjct: 76 TVDVFGQVDILVNNAGVTKDN-LLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQR 132
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGD 680
Y +K + GLTK A++LA NI VN +APG I T D
Sbjct: 154 YVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTD 193
>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp
pdb|1AE1|B Chain B, Tropinone Reductase-I Complex With Nadp
Length = 273
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 127/254 (50%), Gaps = 9/254 (3%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L G A+VT S GIG+AI + L+ GA V SR E +++ +E +++G + G VC
Sbjct: 19 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG-LNVEGSVC 77
Query: 439 HVAKKEDRQKLFEHAEKKFGG-IDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 497
+ + +R KL + F G ++ILV+NA V + E ++ I N ++ +
Sbjct: 78 DLLSRTERDKLMQTVAHVFDGKLNILVNNAGV-VIHKEAKDFTEKDYNIIMGTNFEAAYH 136
Query: 498 LTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 557
L+Q P ++ + + YS SK A+ +TK++A + A +NIRV
Sbjct: 137 LSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRV 196
Query: 558 NCLAPGITKTKFAAAL-----YETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASY 612
N +APG+ T ++ EE V PMGR P E+ ++AFLC ASY
Sbjct: 197 NSVAPGVILTPLVETAIKKNPHQKEEIDNFIVK-TPMGRAGKPQEVSALIAFLCFPAASY 255
Query: 613 ITGEVIVAAGGMQS 626
ITG++I A GG +
Sbjct: 256 ITGQIIWADGGFTA 269
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 95/187 (50%), Gaps = 3/187 (1%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L G A+VT S GIG+AI + L+ GA V SR E +++ +E +++G + G VC
Sbjct: 19 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG-LNVEGSVC 77
Query: 70 HVAKKEDRQKLFEHAEKKFGG-IDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 128
+ + +R KL + F G ++ILV+NA V + E ++ I N ++ +
Sbjct: 78 DLLSRTERDKLMQTVAHVFDGKLNILVNNAGV-VIHKEAKDFTEKDYNIIMGTNFEAAYH 136
Query: 129 LTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 188
L+Q P ++ + + YS SK A+ +TK++A + A +NIRV
Sbjct: 137 LSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRV 196
Query: 189 NCLAPGI 195
N +APG+
Sbjct: 197 NSVAPGV 203
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 638 IGAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
+ YS SK A+ +TK +A + A +NIRVN +APG+I T
Sbjct: 168 VSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILT 206
>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant
In Complex With Nadph Fragment
pdb|1Q7C|B Chain B, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant
In Complex With Nadph Fragment
Length = 244
Score = 120 bits (302), Expect = 2e-27, Method: Composition-based stats.
Identities = 78/244 (31%), Positives = 126/244 (51%), Gaps = 7/244 (2%)
Query: 381 GKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHV 440
GK+A+VT +S GIG AIA+ L+ GA V+ ++ E+ + L G G++ +V
Sbjct: 5 GKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANG----KGLMLNV 60
Query: 441 AKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQ 500
+ + E +FG +DILV+NA + ++ + W+ I E N+ S F L++
Sbjct: 61 TDPASIESVLEKIRAEFGEVDILVNNAGIT-RDNLLMRMKDEEWNDIIETNLSSVFRLSK 119
Query: 501 EVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCL 560
V+ + K+ ++ +K L+G +K++A+++AS I VN +
Sbjct: 120 AVMRAMMKKRHGRIITIGSVVGTMGNGGQANFAAAKAGLIGFSKSLAREVASRGITVNVV 179
Query: 561 APGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVIVA 620
APG +T AL + + A +A VP GRL E+ VAFL SD+A+YITGE +
Sbjct: 180 APGFIETDMTRALSDDQRAGILA--QVPAGRLGGAQEIANAVAFLASDEAAYITGETLHV 237
Query: 621 AGGM 624
GGM
Sbjct: 238 NGGM 241
Score = 82.0 bits (201), Expect = 1e-15, Method: Composition-based stats.
Identities = 53/183 (28%), Positives = 93/183 (50%), Gaps = 5/183 (2%)
Query: 12 GKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHV 71
GK+A+VT +S GIG AIA+ L+A GA V+ ++ E+ + L G G++ +V
Sbjct: 5 GKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANG----KGLMLNV 60
Query: 72 AKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQ 131
+ + E +FG +DILV+NA + ++ + W+ I E N+ S F L++
Sbjct: 61 TDPASIESVLEKIRAEFGEVDILVNNAGIT-RDNLLMRMKDEEWNDIIETNLSSVFRLSK 119
Query: 132 EVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCL 191
V+ + K+ ++ +K L+G +K++A+++AS I VN +
Sbjct: 120 AVMRAMMKKRHGRIITIGSVVGTMGNGGQANFAAAKAGLIGFSKSLAREVASRGITVNVV 179
Query: 192 APG 194
APG
Sbjct: 180 APG 182
Score = 37.0 bits (84), Expect = 0.037, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 692 YGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKKK 745
+G +DILV+NA + N L+ + W+ I + NL S F L++ V+ M KK+
Sbjct: 77 FGEVDILVNNAGITRDNL-LMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKR 129
>pdb|3OP4|A Chain A, Crystal Structure Of Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio
Cholerae O1 Biovar Eltor Str. N16961 In Complex With
Nadp+
pdb|3OP4|B Chain B, Crystal Structure Of Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio
Cholerae O1 Biovar Eltor Str. N16961 In Complex With
Nadp+
Length = 248
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/245 (33%), Positives = 121/245 (49%), Gaps = 7/245 (2%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L GKVA+VT +S GIG AIA+ L+ GA V+ ++ ES + L G G
Sbjct: 7 LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGK----GXAL 62
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
+V E + + + +FGG+DILV+NA + + E W I E N+ S F L
Sbjct: 63 NVTNPESIEAVLKAITDEFGGVDILVNNAGITRDN-LLXRXKEEEWSDIXETNLTSIFRL 121
Query: 499 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 558
++ VL K+ Y+ +K ++G TK+ A+++AS + VN
Sbjct: 122 SKAVLRGXXKKRQGRIINVGSVVGTXGNAGQANYAAAKAGVIGFTKSXAREVASRGVTVN 181
Query: 559 CLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVI 618
+APG +T AL +E ++ VP GRL P E+ VAFL S +A+YITGE +
Sbjct: 182 TVAPGFIETDXTKAL--NDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETL 239
Query: 619 VAAGG 623
GG
Sbjct: 240 HVNGG 244
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 89/185 (48%), Gaps = 5/185 (2%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L GKVA+VT +S GIG AIA+ L+ GA V+ ++ ES + L G G
Sbjct: 7 LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGK----GXAL 62
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
+V E + + + +FGG+DILV+NA + + E W I E N+ S F L
Sbjct: 63 NVTNPESIEAVLKAITDEFGGVDILVNNAGITRDN-LLXRXKEEEWSDIXETNLTSIFRL 121
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
++ VL K+ Y+ +K ++G TK+ A+++AS + VN
Sbjct: 122 SKAVLRGXXKKRQGRIINVGSVVGTXGNAGQANYAAAKAGVIGFTKSXAREVASRGVTVN 181
Query: 190 CLAPG 194
+APG
Sbjct: 182 TVAPG 186
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 688 TDKLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKKK 745
TD+ +GG+DILV+NA + N L E W I + NL S F L++ VL KK+
Sbjct: 78 TDE-FGGVDILVNNAGITRDN-LLXRXKEEEWSDIXETNLTSIFRLSKAVLRGXXKKR 133
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
Y+ +K + G TK A ++A + VN +APG I T
Sbjct: 155 YAAAKAGVIGFTKSXAREVASRGVTVNTVAPGFIET 190
>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase Rickettsia Prowazekii
pdb|3F9I|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase Rickettsia Prowazekii
Length = 249
Score = 120 bits (300), Expect = 3e-27, Method: Composition-based stats.
Identities = 76/246 (30%), Positives = 127/246 (51%), Gaps = 11/246 (4%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L GK +++T +S GIG AIA+ L G+ V+IS E + L+ + VC
Sbjct: 12 LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK----DNYTIEVC 67
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
++A KE+ L K +DILV NA + T + + +DK+ ++N+K+ F+L
Sbjct: 68 NLANKEECSNLIS----KTSNLDILVCNAGITSDT-LAIRMKDQDFDKVIDINLKANFIL 122
Query: 499 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 558
+E + + ++ +A Y SK L+G+TK+++ ++A+ I VN
Sbjct: 123 NREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITVN 182
Query: 559 CLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVI 618
+APG K+ L E+ E V +P+G +P+++ VAFL S++ASYITG+ +
Sbjct: 183 AVAPGFIKSDMTDKL--NEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNASYITGQTL 240
Query: 619 VAAGGM 624
GGM
Sbjct: 241 HVNGGM 246
Score = 83.2 bits (204), Expect = 5e-16, Method: Composition-based stats.
Identities = 55/185 (29%), Positives = 94/185 (50%), Gaps = 9/185 (4%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
LTGK +++T +S GIG AIA+ L G+ V+IS E + L+ + VC
Sbjct: 12 LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK----DNYTIEVC 67
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
++A KE+ L K +DILV NA + T + + +DK+ ++N+K+ F+L
Sbjct: 68 NLANKEECSNLIS----KTSNLDILVCNAGITSDT-LAIRMKDQDFDKVIDINLKANFIL 122
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
+E + + ++ +A Y SK L+G+TK+++ ++A+ I VN
Sbjct: 123 NREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITVN 182
Query: 190 CLAPG 194
+APG
Sbjct: 183 AVAPG 187
Score = 38.1 bits (87), Expect = 0.018, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGDRM 682
Y SK L G+TK ++ ++A I VN +APG I++ D++
Sbjct: 156 YCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKL 197
Score = 35.8 bits (81), Expect = 0.084, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 695 IDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKKK 745
+DILV NA + ++ + + +DK+ D+NLK++F+L +E + M +K+
Sbjct: 85 LDILVCNAGIT-SDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKR 134
>pdb|1O5I|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein)
Reductase (Tm1169) From Thermotoga Maritima At 2.50 A
Resolution
pdb|1O5I|B Chain B, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein)
Reductase (Tm1169) From Thermotoga Maritima At 2.50 A
Resolution
pdb|1O5I|C Chain C, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein)
Reductase (Tm1169) From Thermotoga Maritima At 2.50 A
Resolution
pdb|1O5I|D Chain D, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein)
Reductase (Tm1169) From Thermotoga Maritima At 2.50 A
Resolution
Length = 249
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/247 (34%), Positives = 132/247 (53%), Gaps = 26/247 (10%)
Query: 382 KVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 441
K +V A+S GIG A+A LS EGA V I +R E E L++ GH+ VVC +
Sbjct: 20 KGVLVLAASRGIGRAVADVLSQEGAEVTICARNE-------ELLKRSGHRY---VVCDLR 69
Query: 442 KKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL---- 497
K D LFE ++ +DILV NA GP + + ++ F+ + S FL
Sbjct: 70 K--DLDLLFEKVKE----VDILVLNAG-----GPKAGFFDELTNEDFKEAIDSLFLNMIK 118
Query: 498 LTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 557
+ + LP ++++ ++P + L + ++ AL G K ++ ++A I V
Sbjct: 119 IVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITV 178
Query: 558 NCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEV 617
NC+APG T+T+ L E+ ++ S +PM R+A P+E+ +VAFLCS+ ASY+TG+
Sbjct: 179 NCVAPGWTETERVKELLSEEKKKQVE-SQIPMRRMAKPEEIASVVAFLCSEKASYLTGQT 237
Query: 618 IVAAGGM 624
IV GG+
Sbjct: 238 IVVDGGL 244
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 92/186 (49%), Gaps = 25/186 (13%)
Query: 13 KVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 72
K +V A+S GIG A+A LS EGA V I +R E E L++ GH+ VVC +
Sbjct: 20 KGVLVLAASRGIGRAVADVLSQEGAEVTICARNE-------ELLKRSGHRY---VVCDLR 69
Query: 73 KKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL---- 128
K D LFE ++ +DILV NA GP + + ++ F+ + S FL
Sbjct: 70 K--DLDLLFEKVKE----VDILVLNAG-----GPKAGFFDELTNEDFKEAIDSLFLNMIK 118
Query: 129 LTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 188
+ + LP ++++ ++P + L + ++ AL G K ++ ++A I V
Sbjct: 119 IVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITV 178
Query: 189 NCLAPG 194
NC+APG
Sbjct: 179 NCVAPG 184
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Query: 644 SKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGDRMIAMLSTDK 690
++ AL G K ++ ++AP I VNC+APG T +R+ +LS +K
Sbjct: 156 ARMALTGFLKTLSFEVAPYGITVNCVAPGWTET---ERVKELLSEEK 199
>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum
Length = 285
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 122/243 (50%), Gaps = 4/243 (1%)
Query: 382 KVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 441
KVA+VT + GIG IAK L+ + V+ SR + + + V+ ++ G++ SG V+
Sbjct: 45 KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYES-SGYAGDVS 103
Query: 442 KKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 501
KKE+ ++ + +DILV+NA + + + W+ + N+ S F +TQ
Sbjct: 104 KKEEISEVINKILTEHKNVDILVNNAGI-TRDNLFLRMKNDEWEDVLRTNLNSLFYITQP 162
Query: 502 VLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCLA 561
+ + L YS SK ++G TK++A++LAS NI VN +A
Sbjct: 163 ISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIA 222
Query: 562 PGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVIVAA 621
PG + + +E+ + +SN+P GR+ P+E+ + FL SD + YI G V V
Sbjct: 223 PGFISSDMTDKI--SEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYINGRVFVID 280
Query: 622 GGM 624
GG+
Sbjct: 281 GGL 283
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 90/182 (49%), Gaps = 2/182 (1%)
Query: 13 KVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 72
KVA+VT + GIG IAK L+ + V+ SR + + + V+ ++ G++ SG V+
Sbjct: 45 KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYES-SGYAGDVS 103
Query: 73 KKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 132
KKE+ ++ + +DILV+NA + + + W+ + N+ S F +TQ
Sbjct: 104 KKEEISEVINKILTEHKNVDILVNNAGI-TRDNLFLRMKNDEWEDVLRTNLNSLFYITQP 162
Query: 133 VLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCLA 192
+ + L YS SK ++G TK++A++LAS NI VN +A
Sbjct: 163 ISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIA 222
Query: 193 PG 194
PG
Sbjct: 223 PG 224
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGDRM 682
YS SK + G TK +A++LA NI VN +APG I + D++
Sbjct: 193 YSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI 234
>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose
Dehydrogenase
pdb|3VTZ|B Chain B, Structure Of Thermoplasma Volcanium Aldohexose
Dehydrogenase
pdb|3VTZ|C Chain C, Structure Of Thermoplasma Volcanium Aldohexose
Dehydrogenase
pdb|3VTZ|D Chain D, Structure Of Thermoplasma Volcanium Aldohexose
Dehydrogenase
Length = 269
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/261 (35%), Positives = 131/261 (50%), Gaps = 24/261 (9%)
Query: 382 KVAVVTASSDGIGFAIAKRLSTEGASVV-ISSRKESNVNKAVETLQKEGHQKISGVVCHV 440
KVA+VT S GIG A+ L GA VV +S ++S+VN + H KI V
Sbjct: 15 KVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVS-------DHFKID-----V 62
Query: 441 AKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQ 500
+E+ ++ E KK+G IDILV+NA + + P+ P +W +I +VNV ++L+ +
Sbjct: 63 TNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYS-PLHLTPTEIWRRIIDVNVNGSYLMAK 121
Query: 501 EVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCL 560
+P + A K AY SK ALLGLT++VA D A + IR N +
Sbjct: 122 YTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAPK-IRCNAV 180
Query: 561 APGITKTKFA--AALYETEEAHEIAVSNV-------PMGRLAVPDEMGGIVAFLCSDDAS 611
PG T AA E E + PMGR+ P+E+ +VAFL SD +S
Sbjct: 181 CPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDRSS 240
Query: 612 YITGEVIVAAGGMQSRLTKST 632
+ITG + GG+ S+L ST
Sbjct: 241 FITGACLTVDGGLLSKLPIST 261
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 95/186 (51%), Gaps = 15/186 (8%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVV-ISSRKESNVNKAVETLQKEGHQKISGVV 68
T KVA+VT S GIG A+ L GA VV +S ++S+VN + H KI
Sbjct: 12 FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVS-------DHFKID--- 61
Query: 69 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 128
V +E+ ++ E KK+G IDILV+NA + + P+ P +W +I +VNV ++L
Sbjct: 62 --VTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYS-PLHLTPTEIWRRIIDVNVNGSYL 118
Query: 129 LTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 188
+ + +P + A K AY SK ALLGLT++VA D A + IR
Sbjct: 119 MAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAPK-IRC 177
Query: 189 NCLAPG 194
N + PG
Sbjct: 178 NAVCPG 183
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 688 TDKLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYM 741
T K YG IDILV+NA + + PL +W +I DVN+ S+L+ + +P M
Sbjct: 75 TTKKYGRIDILVNNAGIEQYS-PLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVM 127
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 640 AYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
AY SK AL GLT+ VA D AP+ IR N + PG I T
Sbjct: 152 AYVTSKHALLGLTRSVAIDYAPK-IRCNAVCPGTIMT 187
>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone
Reductase From Agrobacterium Tumefaciens
pdb|3AK4|B Chain B, Crystal Structure Of Nadh-Dependent Quinuclidinone
Reductase From Agrobacterium Tumefaciens
pdb|3AK4|C Chain C, Crystal Structure Of Nadh-Dependent Quinuclidinone
Reductase From Agrobacterium Tumefaciens
pdb|3AK4|D Chain D, Crystal Structure Of Nadh-Dependent Quinuclidinone
Reductase From Agrobacterium Tumefaciens
Length = 263
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 124/263 (47%), Gaps = 27/263 (10%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L+G+ A+VT S GIG AIA+ L GA+V I+ V L+ G V
Sbjct: 10 LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGF----AVEV 65
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
V K+ + A GG D+L +NA V+ P V+ + WD F+VN + FL
Sbjct: 66 DVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMR-PAVDITDEEWDFNFDVNARGVFLA 124
Query: 499 TQEVLPYIRKRNXXXXXXXXXXXXL---APFKLLGAYSVSKTALLGLTKAVAQDLASENI 555
Q + N AP LL YS SK A+ G T+A+A+++A +NI
Sbjct: 125 NQIACRHFLASNTKGVIVNTASLAAKVGAP--LLAHYSASKFAVFGWTQALAREMAPKNI 182
Query: 556 RVNCLAPGITKTKFAAALYETEEAHEIA-------------VSNVPMGRLAVPDEMGGIV 602
RVNC+ PG KT A+ E E E VS P+GR+ P+++ +V
Sbjct: 183 RVNCVCPGFVKT----AMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVV 238
Query: 603 AFLCSDDASYITGEVIVAAGGMQ 625
FL SD A ++TG+ I GG++
Sbjct: 239 VFLASDAARFMTGQGINVTGGVR 261
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 89/189 (47%), Gaps = 10/189 (5%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L+G+ A+VT S GIG AIA+ L GA+V I+ V L+ G V
Sbjct: 10 LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGF----AVEV 65
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
V K+ + A GG D+L +NA V+ P V+ + WD F+VN + FL
Sbjct: 66 DVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMR-PAVDITDEEWDFNFDVNARGVFLA 124
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXL---APFKLLGAYSVSKTALLGLTKAVAQDLASENI 186
Q + N AP LL YS SK A+ G T+A+A+++A +NI
Sbjct: 125 NQIACRHFLASNTKGVIVNTASLAAKVGAP--LLAHYSASKFAVFGWTQALAREMAPKNI 182
Query: 187 RVNCLAPGI 195
RVNC+ PG
Sbjct: 183 RVNCVCPGF 191
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 32/43 (74%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGDRMI 683
YS SK A+FG T+ +A ++AP+NIRVNC+ PG ++T +R I
Sbjct: 159 YSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREI 201
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 684 AMLSTDKLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQ 735
AM GG D+L +NA V+ P V+ ++ WD FDVN + FL Q
Sbjct: 76 AMQKAIDALGGFDLLCANAGVSTM-RPAVDITDEEWDFNFDVNARGVFLANQ 126
>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 A258f Mutant In Complex With Nadh And
D-Glucose
pdb|3AY6|B Chain B, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 A258f Mutant In Complex With Nadh And
D-Glucose
pdb|3AY6|C Chain C, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 A258f Mutant In Complex With Nadh And
D-Glucose
pdb|3AY6|D Chain D, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 A258f Mutant In Complex With Nadh And
D-Glucose
Length = 269
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 126/251 (50%), Gaps = 6/251 (2%)
Query: 377 SRLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISS-RKESNVNKAVETLQKEGHQKISG 435
+ L KV V+T S G+G A+A R E A VVI+ E A + +++ G Q I
Sbjct: 11 TDLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAII- 69
Query: 436 VVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAV-NPATGPVVECPENVWDKIFEVNVKS 494
V V K+ED L + A K+FG +D++++NA V NP P E + W+K+ + N+
Sbjct: 70 VQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPV--PSHELSLDNWNKVIDTNLTG 127
Query: 495 TFLLTQEVLPYIRKRNXX-XXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASE 553
FL ++E + Y + + + P+ L Y+ SK + +T+ +A + A +
Sbjct: 128 AFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPK 187
Query: 554 NIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYI 613
IRVN + PG T A + S +PMG + P+E+ + AFL S ASY+
Sbjct: 188 GIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYIGKPEEVAAVAAFLASSQASYV 247
Query: 614 TGEVIVAAGGM 624
TG + A GGM
Sbjct: 248 TGITLFADGGM 258
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 97/190 (51%), Gaps = 6/190 (3%)
Query: 8 SRLTGKVAVVTASSDGIGFAIAKRLSAEGASVVIS-SRKESNVNKAVETLQKEGHQKISG 66
+ L KV V+T S G+G A+A R E A VVI+ E A + +++ G Q I
Sbjct: 11 TDLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAII- 69
Query: 67 VVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAV-NPATGPVVECPENVWDKIFEVNVKS 125
V V K+ED L + A K+FG +D++++NA V NP P E + W+K+ + N+
Sbjct: 70 VQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPV--PSHELSLDNWNKVIDTNLTG 127
Query: 126 TFLLTQEVLPYIRKRNXX-XXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASE 184
FL ++E + Y + + + P+ L Y+ SK + +T+ +A + A +
Sbjct: 128 AFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPK 187
Query: 185 NIRVNCLAPG 194
IRVN + PG
Sbjct: 188 GIRVNNIGPG 197
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 690 KLYGGIDILVSNAAV-NPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYM 741
K +G +D++++NA V NP P E S W+K+ D NL +FL ++E + Y
Sbjct: 89 KEFGTLDVMINNAGVENPV--PSHELSLDNWNKVIDTNLTGAFLGSREAIKYF 139
Score = 33.1 bits (74), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT-----KFGD 680
Y+ SK + +T+ +A + AP+ IRVN + PG + T KF D
Sbjct: 166 YAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTPINAEKFAD 210
>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 G259a Mutant
pdb|3AY7|B Chain B, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 G259a Mutant
Length = 269
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 126/251 (50%), Gaps = 6/251 (2%)
Query: 377 SRLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISS-RKESNVNKAVETLQKEGHQKISG 435
+ L KV V+T S G+G A+A R E A VVI+ E A + +++ G Q I
Sbjct: 11 TDLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAII- 69
Query: 436 VVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAV-NPATGPVVECPENVWDKIFEVNVKS 494
V V K+ED L + A K+FG +D++++NA V NP P E + W+K+ + N+
Sbjct: 70 VQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPV--PSHELSLDNWNKVIDTNLTG 127
Query: 495 TFLLTQEVLPYIRKRNXX-XXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASE 553
FL ++E + Y + + + P+ L Y+ SK + +T+ +A + A +
Sbjct: 128 AFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPK 187
Query: 554 NIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYI 613
IRVN + PG T A + S +PMG + P+E+ + AFL S ASY+
Sbjct: 188 GIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYIGKPEEVAAVAAFLASSQASYV 247
Query: 614 TGEVIVAAGGM 624
TG + A GGM
Sbjct: 248 TGITLFADGGM 258
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 97/190 (51%), Gaps = 6/190 (3%)
Query: 8 SRLTGKVAVVTASSDGIGFAIAKRLSAEGASVVIS-SRKESNVNKAVETLQKEGHQKISG 66
+ L KV V+T S G+G A+A R E A VVI+ E A + +++ G Q I
Sbjct: 11 TDLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAII- 69
Query: 67 VVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAV-NPATGPVVECPENVWDKIFEVNVKS 125
V V K+ED L + A K+FG +D++++NA V NP P E + W+K+ + N+
Sbjct: 70 VQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPV--PSHELSLDNWNKVIDTNLTG 127
Query: 126 TFLLTQEVLPYIRKRNXX-XXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASE 184
FL ++E + Y + + + P+ L Y+ SK + +T+ +A + A +
Sbjct: 128 AFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPK 187
Query: 185 NIRVNCLAPG 194
IRVN + PG
Sbjct: 188 GIRVNNIGPG 197
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 690 KLYGGIDILVSNAAV-NPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPY 740
K +G +D++++NA V NP P E S W+K+ D NL +FL ++E + Y
Sbjct: 89 KEFGTLDVMINNAGVENPV--PSHELSLDNWNKVIDTNLTGAFLGSREAIKY 138
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT-----KFGD 680
Y+ SK + +T+ +A + AP+ IRVN + PG + T KF D
Sbjct: 166 YAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTPINAEKFAD 210
>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 In Ligand-Free Form
pdb|3AUS|B Chain B, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 In Ligand-Free Form
pdb|3AUT|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 In Complex With Nadh
pdb|3AUT|B Chain B, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 In Complex With Nadh
pdb|3AUU|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 In Complex With D-Glucose
pdb|3AUU|B Chain B, Crystal Structure Of Bacillus Megaterium Glucose
Dehydrogenase 4 In Complex With D-Glucose
Length = 269
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 126/251 (50%), Gaps = 6/251 (2%)
Query: 377 SRLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISS-RKESNVNKAVETLQKEGHQKISG 435
+ L KV V+T S G+G A+A R E A VVI+ E A + +++ G Q I
Sbjct: 11 TDLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAII- 69
Query: 436 VVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAV-NPATGPVVECPENVWDKIFEVNVKS 494
V V K+ED L + A K+FG +D++++NA V NP P E + W+K+ + N+
Sbjct: 70 VQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPV--PSHELSLDNWNKVIDTNLTG 127
Query: 495 TFLLTQEVLPYIRKRNXX-XXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASE 553
FL ++E + Y + + + P+ L Y+ SK + +T+ +A + A +
Sbjct: 128 AFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPK 187
Query: 554 NIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYI 613
IRVN + PG T A + S +PMG + P+E+ + AFL S ASY+
Sbjct: 188 GIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYIGKPEEVAAVAAFLASSQASYV 247
Query: 614 TGEVIVAAGGM 624
TG + A GGM
Sbjct: 248 TGITLFADGGM 258
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 97/190 (51%), Gaps = 6/190 (3%)
Query: 8 SRLTGKVAVVTASSDGIGFAIAKRLSAEGASVVIS-SRKESNVNKAVETLQKEGHQKISG 66
+ L KV V+T S G+G A+A R E A VVI+ E A + +++ G Q I
Sbjct: 11 TDLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAII- 69
Query: 67 VVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAV-NPATGPVVECPENVWDKIFEVNVKS 125
V V K+ED L + A K+FG +D++++NA V NP P E + W+K+ + N+
Sbjct: 70 VQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPV--PSHELSLDNWNKVIDTNLTG 127
Query: 126 TFLLTQEVLPYIRKRNXX-XXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASE 184
FL ++E + Y + + + P+ L Y+ SK + +T+ +A + A +
Sbjct: 128 AFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPK 187
Query: 185 NIRVNCLAPG 194
IRVN + PG
Sbjct: 188 GIRVNNIGPG 197
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 690 KLYGGIDILVSNAAV-NPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPY 740
K +G +D++++NA V NP P E S W+K+ D NL +FL ++E + Y
Sbjct: 89 KEFGTLDVMINNAGVENPV--PSHELSLDNWNKVIDTNLTGAFLGSREAIKY 138
Score = 33.1 bits (74), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT-----KFGD 680
Y+ SK + +T+ +A + AP+ IRVN + PG + T KF D
Sbjct: 166 YAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTPINAEKFAD 210
>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From
Sulfolobus Acidocaldarius
pdb|4FN4|B Chain B, Short-chain Nad(h)-dependent Dehydrogenase/reductase From
Sulfolobus Acidocaldarius
pdb|4FN4|C Chain C, Short-chain Nad(h)-dependent Dehydrogenase/reductase From
Sulfolobus Acidocaldarius
pdb|4FN4|D Chain D, Short-chain Nad(h)-dependent Dehydrogenase/reductase From
Sulfolobus Acidocaldarius
Length = 254
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 126/248 (50%), Gaps = 3/248 (1%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L KV +VT + GIG AIAK+ + + VV E +N+ V+ L+ G +++ GV
Sbjct: 5 LKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMG-KEVLGVKA 63
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
V+KK+D ++ + + ID+L +NA + PV E + +W+++ VN+ S F
Sbjct: 64 DVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYS 123
Query: 499 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 558
++ V+P + K+ + Y+V+K L+GLT+++A + IR
Sbjct: 124 SRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAV 183
Query: 559 CLAPGITKTKFAAALYETEEAHEIAVSNVP--MGRLAVPDEMGGIVAFLCSDDASYITGE 616
+ PG KT + E ++ + RLA P+++ ++ FL SD+AS++ G+
Sbjct: 184 AVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEASFVNGD 243
Query: 617 VIVAAGGM 624
+V GG+
Sbjct: 244 AVVVDGGL 251
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 94/185 (50%), Gaps = 1/185 (0%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L KV +VT + GIG AIAK+ + + VV E +N+ V+ L+ G +++ GV
Sbjct: 5 LKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMG-KEVLGVKA 63
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
V+KK+D ++ + + ID+L +NA + PV E + +W+++ VN+ S F
Sbjct: 64 DVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYS 123
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
++ V+P + K+ + Y+V+K L+GLT+++A + IR
Sbjct: 124 SRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAV 183
Query: 190 CLAPG 194
+ PG
Sbjct: 184 AVLPG 188
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%)
Query: 688 TDKLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKK 744
T + Y ID+L +NA + P+ E S+ +W+++ VNL S+F ++ V+P M K+
Sbjct: 78 TFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQ 134
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 637 FIGA-YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFG 679
F GA Y+V+K L GLT+ +A + IR + PG ++T G
Sbjct: 152 FAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIG 195
>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
pdb|3U5T|B Chain B, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
pdb|3U5T|C Chain C, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
pdb|3U5T|D Chain D, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
Length = 267
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 132/247 (53%), Gaps = 12/247 (4%)
Query: 382 KVAVVTASSDGIGFAIAKRLSTEGASVVIS-SRKESNVNKAVETLQKEGHQKISGVVCHV 440
KVA+VT +S GIG AIA RL+++G +VVI+ + K + + ++ G + ++ V
Sbjct: 28 KVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALT-AQADV 86
Query: 441 AKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQ 500
+ ++LF AE+ FGG+D+LV+NA + P T + E + V+D++ VN+K TF +
Sbjct: 87 SDPAAVRRLFATAEEAFGGVDVLVNNAGIXPLT-TIAETGDAVFDRVIAVNLKGTFNTLR 145
Query: 501 EVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCL 560
E +R L P G Y+ +K + T ++++L +I VN +
Sbjct: 146 EAAQRLRVGGRIINXSTSQVGLLHPS--YGIYAAAKAGVEAXTHVLSKELRGRDITVNAV 203
Query: 561 APGITKTKFAAALY---ETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEV 617
APG T T L+ +++E + P+ RL P ++ G VAFL D +++ G+V
Sbjct: 204 APGPTATD----LFLEGKSDEVRDRFAKLAPLERLGTPQDIAGAVAFLAGPDGAWVNGQV 259
Query: 618 IVAAGGM 624
+ A GG+
Sbjct: 260 LRANGGI 266
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 100/185 (54%), Gaps = 5/185 (2%)
Query: 11 TGKVAVVTASSDGIGFAIAKRLSAEGASVVIS-SRKESNVNKAVETLQKEGHQKISGVVC 69
T KVA+VT +S GIG AIA RL+++G +VVI+ + K + + ++ G + ++
Sbjct: 26 TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALT-AQA 84
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
V+ ++LF AE+ FGG+D+LV+NA + P T + E + V+D++ VN+K TF
Sbjct: 85 DVSDPAAVRRLFATAEEAFGGVDVLVNNAGIXPLT-TIAETGDAVFDRVIAVNLKGTFNT 143
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
+E +R L P G Y+ +K + T ++++L +I VN
Sbjct: 144 LREAAQRLRVGGRIINXSTSQVGLLHPS--YGIYAAAKAGVEAXTHVLSKELRGRDITVN 201
Query: 190 CLAPG 194
+APG
Sbjct: 202 AVAPG 206
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 687 STDKLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMR 742
+ ++ +GG+D+LV+NA + P + E + V+D++ VNLK +F +E +R
Sbjct: 98 TAEEAFGGVDVLVNNAGIXPLTT-IAETGDAVFDRVIAVNLKGTFNTLREAAQRLR 152
>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph
pdb|3SJU|B Chain B, Hedamycin Polyketide Ketoreductase Bound To Nadph
Length = 279
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 125/260 (48%), Gaps = 25/260 (9%)
Query: 382 KVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 441
+ A VT S GIG A+A+ L+ G +V +R NV+ AV+ L+ GH + G C V
Sbjct: 25 QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHD-VDGSSCDVT 83
Query: 442 KKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 501
++ A ++FG I ILV++A N G + + +W + + N+ F +T+E
Sbjct: 84 STDEVHAAVAAAVERFGPIGILVNSAGRNGG-GETADLDDALWADVLDTNLTGVFRVTRE 142
Query: 502 VL--------PYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASE 553
VL + R N AP Y+ SK ++G TK+V +LA
Sbjct: 143 VLRAGGMREAGWGRIVNIASTGGKQGVMYAAP------YTASKHGVVGFTKSVGFELAKT 196
Query: 554 NIRVNCLAPGITKTKFAAALYET---------EEAHEIAVSNVPMGRLAVPDEMGGIVAF 604
I VN + PG +T A + E +E HE + +P+GR + P+E+ G+V +
Sbjct: 197 GITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGY 256
Query: 605 LCSDDASYITGEVIVAAGGM 624
L +D A+ IT + + GG+
Sbjct: 257 LVTDAAASITAQALNVCGGL 276
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 90/190 (47%), Gaps = 16/190 (8%)
Query: 13 KVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 72
+ A VT S GIG A+A+ L+A G +V +R NV+ AV+ L+ GH + G C V
Sbjct: 25 QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHD-VDGSSCDVT 83
Query: 73 KKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 132
++ A ++FG I ILV++A N G + + +W + + N+ F +T+E
Sbjct: 84 STDEVHAAVAAAVERFGPIGILVNSAGRNGG-GETADLDDALWADVLDTNLTGVFRVTRE 142
Query: 133 VL--------PYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASE 184
VL + R N AP Y+ SK ++G TK+V +LA
Sbjct: 143 VLRAGGMREAGWGRIVNIASTGGKQGVMYAAP------YTASKHGVVGFTKSVGFELAKT 196
Query: 185 NIRVNCLAPG 194
I VN + PG
Sbjct: 197 GITVNAVCPG 206
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 692 YGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVL 738
+G I ILV++A N E + + +W + D NL F +T+EVL
Sbjct: 99 FGPIGILVNSAGRNGGGET-ADLDDALWADVLDTNLTGVFRVTREVL 144
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGDRM 682
Y+ SK + G TK V +LA I VN + PG + T +R+
Sbjct: 175 YTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERV 216
>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
pdb|3FTP|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
pdb|3FTP|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
pdb|3FTP|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
Length = 270
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 124/245 (50%), Gaps = 8/245 (3%)
Query: 382 KVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 441
+VA+VT +S GIG AIA L+ GA V+ ++ E+ ++ G + G V +V
Sbjct: 29 QVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEG-RGAVLNVN 87
Query: 442 KKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 501
L E K+FG +++LV+NA + + ++ WD + + N+K+ F L++
Sbjct: 88 DATAVDALVESTLKEFGALNVLVNNAGITQDQ-LAMRMKDDEWDAVIDTNLKAVFRLSRA 146
Query: 502 VL-PYIRKRNXXXXXXXXXXXXLA-PFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNC 559
VL P ++ R P ++ Y+ +K + G+T+A+A+++ S I VNC
Sbjct: 147 VLRPMMKARGGRIVNITSVVGSAGNPGQV--NYAAAKAGVAGMTRALAREIGSRGITVNC 204
Query: 560 LAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVIV 619
+APG T L +E + +P+GRL P+++ VAFL S A YITG +
Sbjct: 205 VAPGFIDTDMTKGL--PQEQQTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGTTLH 262
Query: 620 AAGGM 624
GGM
Sbjct: 263 VNGGM 267
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 95/184 (51%), Gaps = 6/184 (3%)
Query: 13 KVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 72
+VA+VT +S GIG AIA L+ GA V+ ++ E+ ++ G + G V +V
Sbjct: 29 QVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEG-RGAVLNVN 87
Query: 73 KKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 132
L E K+FG +++LV+NA + + ++ WD + + N+K+ F L++
Sbjct: 88 DATAVDALVESTLKEFGALNVLVNNAGITQDQ-LAMRMKDDEWDAVIDTNLKAVFRLSRA 146
Query: 133 VL-PYIRKRNXXXXXXXXXXXXLA-PFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNC 190
VL P ++ R P ++ Y+ +K + G+T+A+A+++ S I VNC
Sbjct: 147 VLRPMMKARGGRIVNITSVVGSAGNPGQV--NYAAAKAGVAGMTRALAREIGSRGITVNC 204
Query: 191 LAPG 194
+APG
Sbjct: 205 VAPG 208
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 687 STDKLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKKK 745
ST K +G +++LV+NA + ++ + + WD + D NLK+ F L++ VL M K +
Sbjct: 98 STLKEFGALNVLVNNAGITQ-DQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKAR 155
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
Y+ +K + G+T+ +A ++ I VNC+APG I T
Sbjct: 177 YAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDM 214
>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide
Ketoreductase With Nadph
pdb|4DBZ|B Chain B, Crystal Structure Of V151l Actinorhodin Polyketide
Ketoreductase With Nadph
Length = 281
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 124/254 (48%), Gaps = 13/254 (5%)
Query: 382 KVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 441
+VA+VT ++ GIG IA+RL EG V + +R E + ++ L++ G + G C V
Sbjct: 27 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEA-DGRTCDVR 85
Query: 442 KKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 501
+ + L +++G +D+LV+NA P G E + +W + E N+ F +T++
Sbjct: 86 SVPEIEALVAAVVERYGPVDVLVNNAG-RPGGGATAELADELWLDVVETNLTGVFRVTKQ 144
Query: 502 VLPY--IRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNC 559
VL + +R YS SK ++G TKA+ +LA I VN
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGKQGLVHAAPYSASKHGVVGFTKALGLELARTGITVNA 204
Query: 560 LAPGITKTKFAAALYE---------TEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDA 610
+ PG +T AA++ E TEEA + + VP+GR P E+ +VA+L A
Sbjct: 205 VCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGA 264
Query: 611 SYITGEVIVAAGGM 624
+ +T + + GG+
Sbjct: 265 AAVTAQALNVCGGL 278
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 89/184 (48%), Gaps = 4/184 (2%)
Query: 13 KVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 72
+VA+VT ++ GIG IA+RL EG V + +R E + ++ L++ G + G C V
Sbjct: 27 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEA-DGRTCDVR 85
Query: 73 KKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 132
+ + L +++G +D+LV+NA P G E + +W + E N+ F +T++
Sbjct: 86 SVPEIEALVAAVVERYGPVDVLVNNAG-RPGGGATAELADELWLDVVETNLTGVFRVTKQ 144
Query: 133 VLPY--IRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNC 190
VL + +R YS SK ++G TKA+ +LA I VN
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGKQGLVHAAPYSASKHGVVGFTKALGLELARTGITVNA 204
Query: 191 LAPG 194
+ PG
Sbjct: 205 VCPG 208
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 9/68 (13%)
Query: 618 IVAAGGMQSRLTKSTVEFRFIGA---------YSVSKTALFGLTKVVAEDLAPENIRVNC 668
++ AGGM R T V G YS SK + G TK + +LA I VN
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGKQGLVHAAPYSASKHGVVGFTKALGLELARTGITVNA 204
Query: 669 LAPGLIRT 676
+ PG + T
Sbjct: 205 VCPGFVET 212
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 692 YGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVL 738
YG +D+LV+NA P E ++ +W + + NL F +T++VL
Sbjct: 101 YGPVDVLVNNAG-RPGGGATAELADELWLDVVETNLTGVFRVTKQVL 146
>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And
Inhibitor Emodin
pdb|2RH4|B Chain B, Actinorhodin Ketoreductase, Actkr, With Nadph And
Inhibitor Emodin
pdb|2RHC|B Chain B, Actinorhodin Ketordeuctase, Actkr, With Nadp+ And
Inhibitor Emodin
pdb|2RHC|A Chain A, Actinorhodin Ketordeuctase, Actkr, With Nadp+ And
Inhibitor Emodin
Length = 277
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 124/254 (48%), Gaps = 13/254 (5%)
Query: 382 KVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 441
+VA+VT ++ GIG IA+RL EG V + +R E + ++ L++ G + G C V
Sbjct: 23 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEA-DGRTCDVR 81
Query: 442 KKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 501
+ + L +++G +D+LV+NA P G E + +W + E N+ F +T++
Sbjct: 82 SVPEIEALVAAVVERYGPVDVLVNNAG-RPGGGATAELADELWLDVVETNLTGVFRVTKQ 140
Query: 502 VLPY--IRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNC 559
VL + +R YS SK ++G TKA+ +LA I VN
Sbjct: 141 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 200
Query: 560 LAPGITKTKFAAALYE---------TEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDA 610
+ PG +T AA++ E TEEA + + VP+GR P E+ +VA+L A
Sbjct: 201 VCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGA 260
Query: 611 SYITGEVIVAAGGM 624
+ +T + + GG+
Sbjct: 261 AAVTAQALNVCGGL 274
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 89/184 (48%), Gaps = 4/184 (2%)
Query: 13 KVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 72
+VA+VT ++ GIG IA+RL EG V + +R E + ++ L++ G + G C V
Sbjct: 23 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEA-DGRTCDVR 81
Query: 73 KKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 132
+ + L +++G +D+LV+NA P G E + +W + E N+ F +T++
Sbjct: 82 SVPEIEALVAAVVERYGPVDVLVNNAG-RPGGGATAELADELWLDVVETNLTGVFRVTKQ 140
Query: 133 VLPY--IRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNC 190
VL + +R YS SK ++G TKA+ +LA I VN
Sbjct: 141 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 200
Query: 191 LAPG 194
+ PG
Sbjct: 201 VCPG 204
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 9/68 (13%)
Query: 618 IVAAGGMQSRLTKSTVEFRFIGA---------YSVSKTALFGLTKVVAEDLAPENIRVNC 668
++ AGGM R T V G YS SK + G TK + +LA I VN
Sbjct: 141 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 200
Query: 669 LAPGLIRT 676
+ PG + T
Sbjct: 201 VCPGFVET 208
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 692 YGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVL 738
YG +D+LV+NA P E ++ +W + + NL F +T++VL
Sbjct: 97 YGPVDVLVNNAG-RPGGGATAELADELWLDVVETNLTGVFRVTKQVL 142
>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase
pdb|1W4Z|B Chain B, Structure Of Actinorhodin Polyketide (Actiii) Reductase
Length = 281
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 124/254 (48%), Gaps = 13/254 (5%)
Query: 382 KVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 441
+VA+VT ++ GIG IA+RL EG V + +R E + ++ L++ G + G C V
Sbjct: 27 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEA-DGRTCDVR 85
Query: 442 KKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 501
+ + L +++G +D+LV+NA P G E + +W + E N+ F +T++
Sbjct: 86 SVPEIEALVAAVVERYGPVDVLVNNAG-RPGGGATAELADELWLDVVETNLTGVFRVTKQ 144
Query: 502 VLPY--IRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNC 559
VL + +R YS SK ++G TKA+ +LA I VN
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 204
Query: 560 LAPGITKTKFAAALYE---------TEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDA 610
+ PG +T AA++ E TEEA + + VP+GR P E+ +VA+L A
Sbjct: 205 VCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGA 264
Query: 611 SYITGEVIVAAGGM 624
+ +T + + GG+
Sbjct: 265 AAVTAQALNVCGGL 278
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 89/184 (48%), Gaps = 4/184 (2%)
Query: 13 KVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 72
+VA+VT ++ GIG IA+RL EG V + +R E + ++ L++ G + G C V
Sbjct: 27 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEA-DGRTCDVR 85
Query: 73 KKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 132
+ + L +++G +D+LV+NA P G E + +W + E N+ F +T++
Sbjct: 86 SVPEIEALVAAVVERYGPVDVLVNNAG-RPGGGATAELADELWLDVVETNLTGVFRVTKQ 144
Query: 133 VLPY--IRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNC 190
VL + +R YS SK ++G TKA+ +LA I VN
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 204
Query: 191 LAPG 194
+ PG
Sbjct: 205 VCPG 208
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 9/68 (13%)
Query: 618 IVAAGGMQSRLTKSTVEFRFIGA---------YSVSKTALFGLTKVVAEDLAPENIRVNC 668
++ AGGM R T V G YS SK + G TK + +LA I VN
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 204
Query: 669 LAPGLIRT 676
+ PG + T
Sbjct: 205 VCPGFVET 212
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 692 YGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVL 738
YG +D+LV+NA P E ++ +W + + NL F +T++VL
Sbjct: 101 YGPVDVLVNNAG-RPGGGATAELADELWLDVVETNLTGVFRVTKQVL 146
>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide
Ketoreductase With Nadph
pdb|4DC1|B Chain B, Crystal Structure Of Y202f Actinorhodin Polyketide
Ketoreductase With Nadph
Length = 281
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 124/254 (48%), Gaps = 13/254 (5%)
Query: 382 KVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 441
+VA+VT ++ GIG IA+RL EG V + +R E + ++ L++ G + G C V
Sbjct: 27 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEA-DGRTCDVR 85
Query: 442 KKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 501
+ + L +++G +D+LV+NA P G E + +W + E N+ F +T++
Sbjct: 86 SVPEIEALVAAVVERYGPVDVLVNNAG-RPGGGATAELADELWLDVVETNLTGVFRVTKQ 144
Query: 502 VLPY--IRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNC 559
VL + +R YS SK ++G TKA+ +LA I VN
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 204
Query: 560 LAPGITKTKFAAALYE---------TEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDA 610
+ PG +T AA++ E TEEA + + VP+GR P E+ +VA+L A
Sbjct: 205 VCPGFVETPMAASVREHFSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGA 264
Query: 611 SYITGEVIVAAGGM 624
+ +T + + GG+
Sbjct: 265 AAVTAQALNVCGGL 278
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 89/184 (48%), Gaps = 4/184 (2%)
Query: 13 KVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 72
+VA+VT ++ GIG IA+RL EG V + +R E + ++ L++ G + G C V
Sbjct: 27 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEA-DGRTCDVR 85
Query: 73 KKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 132
+ + L +++G +D+LV+NA P G E + +W + E N+ F +T++
Sbjct: 86 SVPEIEALVAAVVERYGPVDVLVNNAG-RPGGGATAELADELWLDVVETNLTGVFRVTKQ 144
Query: 133 VLPY--IRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNC 190
VL + +R YS SK ++G TKA+ +LA I VN
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 204
Query: 191 LAPG 194
+ PG
Sbjct: 205 VCPG 208
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 9/68 (13%)
Query: 618 IVAAGGMQSRLTKSTVEFRFIGA---------YSVSKTALFGLTKVVAEDLAPENIRVNC 668
++ AGGM R T V G YS SK + G TK + +LA I VN
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 204
Query: 669 LAPGLIRT 676
+ PG + T
Sbjct: 205 VCPGFVET 212
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 692 YGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVL 738
YG +D+LV+NA P E ++ +W + + NL F +T++VL
Sbjct: 101 YGPVDVLVNNAG-RPGGGATAELADELWLDVVETNLTGVFRVTKQVL 146
>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp
Bound
pdb|1X7G|B Chain B, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp
Bound
pdb|1X7H|A Chain A, Actinorhodin Polyketide Ketoreductase, With Nadph Bound
pdb|1X7H|B Chain B, Actinorhodin Polyketide Ketoreductase, With Nadph Bound
pdb|1XR3|A Chain A, Actinorhodin Polyketide Ketoreductase With Nadp And The
Inhibitor Isoniazid Bound
pdb|1XR3|B Chain B, Actinorhodin Polyketide Ketoreductase With Nadp And The
Inhibitor Isoniazid Bound
Length = 261
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 124/254 (48%), Gaps = 13/254 (5%)
Query: 382 KVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 441
+VA+VT ++ GIG IA+RL EG V + +R E + ++ L++ G + G C V
Sbjct: 7 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEA-DGRTCDVR 65
Query: 442 KKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 501
+ + L +++G +D+LV+NA P G E + +W + E N+ F +T++
Sbjct: 66 SVPEIEALVAAVVERYGPVDVLVNNAG-RPGGGATAELADELWLDVVETNLTGVFRVTKQ 124
Query: 502 VLPY--IRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNC 559
VL + +R YS SK ++G TKA+ +LA I VN
Sbjct: 125 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 184
Query: 560 LAPGITKTKFAAALYE---------TEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDA 610
+ PG +T AA++ E TEEA + + VP+GR P E+ +VA+L A
Sbjct: 185 VCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGA 244
Query: 611 SYITGEVIVAAGGM 624
+ +T + + GG+
Sbjct: 245 AAVTAQALNVCGGL 258
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 89/184 (48%), Gaps = 4/184 (2%)
Query: 13 KVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 72
+VA+VT ++ GIG IA+RL EG V + +R E + ++ L++ G + G C V
Sbjct: 7 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEA-DGRTCDVR 65
Query: 73 KKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 132
+ + L +++G +D+LV+NA P G E + +W + E N+ F +T++
Sbjct: 66 SVPEIEALVAAVVERYGPVDVLVNNAG-RPGGGATAELADELWLDVVETNLTGVFRVTKQ 124
Query: 133 VLPY--IRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNC 190
VL + +R YS SK ++G TKA+ +LA I VN
Sbjct: 125 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 184
Query: 191 LAPG 194
+ PG
Sbjct: 185 VCPG 188
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 9/68 (13%)
Query: 618 IVAAGGMQSRLTKSTVEFRFIGA---------YSVSKTALFGLTKVVAEDLAPENIRVNC 668
++ AGGM R T V G YS SK + G TK + +LA I VN
Sbjct: 125 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 184
Query: 669 LAPGLIRT 676
+ PG + T
Sbjct: 185 VCPGFVET 192
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 692 YGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVL 738
YG +D+LV+NA P E ++ +W + + NL F +T++VL
Sbjct: 81 YGPVDVLVNNAG-RPGGGATAELADELWLDVVETNLTGVFRVTKQVL 126
>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase
pdb|2CF2|N Chain N, Architecture Of Mammalian Fatty Acid Synthase
Length = 226
Score = 113 bits (283), Expect = 3e-25, Method: Composition-based stats.
Identities = 75/244 (30%), Positives = 124/244 (50%), Gaps = 22/244 (9%)
Query: 381 GKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHV 440
GK+A+VT +S GIG AIA+ L+ GA V+ ++ E+ + L G G++ +V
Sbjct: 5 GKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANG----KGLMLNV 60
Query: 441 AKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQ 500
+ + E +FG +DILV+NA + ++ + W+ I E N+ S F L++
Sbjct: 61 TDPASIESVLEKIRAEFGEVDILVNNAGIT-RDNLLMRMKDEEWNDIIETNLSSVFRLSK 119
Query: 501 EVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCL 560
V+ + K+ Y+ +K L+G +K++A+++AS I VN +
Sbjct: 120 AVMRAMMKKRHGRIITIGGQAN---------YAAAKAGLIGFSKSLAREVASRGITVNVV 170
Query: 561 APGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVIVA 620
APG +T +++ ++ VP GRL E+ VAFL SD+A+YITGE +
Sbjct: 171 APGFIET--------SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLHV 222
Query: 621 AGGM 624
GGM
Sbjct: 223 NGGM 226
Score = 82.0 bits (201), Expect = 1e-15, Method: Composition-based stats.
Identities = 54/183 (29%), Positives = 93/183 (50%), Gaps = 14/183 (7%)
Query: 12 GKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHV 71
GK+A+VT +S GIG AIA+ L+A GA V+ ++ E+ + L G G++ +V
Sbjct: 5 GKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANG----KGLMLNV 60
Query: 72 AKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQ 131
+ + E +FG +DILV+NA + ++ + W+ I E N+ S F L++
Sbjct: 61 TDPASIESVLEKIRAEFGEVDILVNNAGIT-RDNLLMRMKDEEWNDIIETNLSSVFRLSK 119
Query: 132 EVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCL 191
V+ + K+ Y+ +K L+G +K++A+++AS I VN +
Sbjct: 120 AVMRAMMKKRHGRIITIGGQAN---------YAAAKAGLIGFSKSLAREVASRGITVNVV 170
Query: 192 APG 194
APG
Sbjct: 171 APG 173
Score = 37.0 bits (84), Expect = 0.040, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 692 YGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKKK 745
+G +DILV+NA + N L+ + W+ I + NL S F L++ V+ M KK+
Sbjct: 77 FGEVDILVNNAGITRDNL-LMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKR 129
>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide
Ketoreductase With Nadph
pdb|4DC0|B Chain B, Crystal Structure Of F189w Actinorhodin Polyketide
Ketoreductase With Nadph
Length = 281
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 124/254 (48%), Gaps = 13/254 (5%)
Query: 382 KVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 441
+VA+VT ++ GIG IA+RL EG V + +R E + ++ L++ G + G C V
Sbjct: 27 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEA-DGRTCDVR 85
Query: 442 KKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 501
+ + L +++G +D+LV+NA P G E + +W + E N+ F +T++
Sbjct: 86 SVPEIEALVAAVVERYGPVDVLVNNAG-RPGGGATAELADELWLDVVETNLTGVFRVTKQ 144
Query: 502 VLPY--IRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNC 559
VL + +R YS SK ++G TKA+ +LA I VN
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 204
Query: 560 LAPGITKTKFAAALYE---------TEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDA 610
+ PG +T AA++ E TEEA + + VP+GR P E+ +VA+L A
Sbjct: 205 VCPGWVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGA 264
Query: 611 SYITGEVIVAAGGM 624
+ +T + + GG+
Sbjct: 265 AAVTAQALNVCGGL 278
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 89/184 (48%), Gaps = 4/184 (2%)
Query: 13 KVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 72
+VA+VT ++ GIG IA+RL EG V + +R E + ++ L++ G + G C V
Sbjct: 27 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEA-DGRTCDVR 85
Query: 73 KKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 132
+ + L +++G +D+LV+NA P G E + +W + E N+ F +T++
Sbjct: 86 SVPEIEALVAAVVERYGPVDVLVNNAG-RPGGGATAELADELWLDVVETNLTGVFRVTKQ 144
Query: 133 VLPY--IRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNC 190
VL + +R YS SK ++G TKA+ +LA I VN
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 204
Query: 191 LAPG 194
+ PG
Sbjct: 205 VCPG 208
Score = 35.8 bits (81), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 9/70 (12%)
Query: 618 IVAAGGMQSRLTKSTVEFRFIGA---------YSVSKTALFGLTKVVAEDLAPENIRVNC 668
++ AGGM R T V G YS SK + G TK + +LA I VN
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 204
Query: 669 LAPGLIRTKF 678
+ PG + T
Sbjct: 205 VCPGWVETPM 214
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 692 YGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVL 738
YG +D+LV+NA P E ++ +W + + NL F +T++VL
Sbjct: 101 YGPVDVLVNNAG-RPGGGATAELADELWLDVVETNLTGVFRVTKQVL 146
>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE
SDR FROM Mycobacterium Smegmatis
pdb|3PK0|B Chain B, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE
SDR FROM Mycobacterium Smegmatis
pdb|3PK0|C Chain C, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE
SDR FROM Mycobacterium Smegmatis
pdb|3PK0|D Chain D, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE
SDR FROM Mycobacterium Smegmatis
Length = 262
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 119/247 (48%), Gaps = 6/247 (2%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L G+ VVT + GIG IA + GA+V ++ R ++++ V L + G K+ GV
Sbjct: 8 LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQT 67
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
V+ + L A ++FGGID++ +NA V P PE + + IF VNV TF
Sbjct: 68 DVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQL-NGIFAVNVNGTFYA 126
Query: 499 TQEVL-PYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 557
Q L I + + + Y +K A LG + A +LA I V
Sbjct: 127 VQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHKITV 186
Query: 558 NCLAPGITKTKFAAALYETEEAHEIAVS-NVPMGRLAVPDEMGGIVAFLCSDDASYITGE 616
N + PG T+ L E E + +++ ++P G L P+++G + AFL + +A YITG+
Sbjct: 187 NAIMPGNIMTE---GLLENGEEYIASMARSIPAGALGTPEDIGHLAAFLATKEAGYITGQ 243
Query: 617 VIVAAGG 623
I GG
Sbjct: 244 AIAVDGG 250
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 85/186 (45%), Gaps = 2/186 (1%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L G+ VVT + GIG IA + GA+V ++ R ++++ V L + G K+ GV
Sbjct: 8 LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQT 67
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
V+ + L A ++FGGID++ +NA V P PE + + IF VNV TF
Sbjct: 68 DVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQL-NGIFAVNVNGTFYA 126
Query: 130 TQEVL-PYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 188
Q L I + + + Y +K A LG + A +LA I V
Sbjct: 127 VQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHKITV 186
Query: 189 NCLAPG 194
N + PG
Sbjct: 187 NAIMPG 192
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 692 YGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVL 738
+GGID++ +NA V P + PL + + IF VN+ +F Q L
Sbjct: 86 FGGIDVVCANAGVFP-DAPLATMTPEQLNGIFAVNVNGTFYAVQACL 131
Score = 32.7 bits (73), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTK 677
Y +K A G + A +LAP I VN + PG I T+
Sbjct: 161 YGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTE 197
>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From
Caenorhabditis Elegans With Cofactor And Substrate
pdb|1XHL|B Chain B, Crystal Structure Of Putative Tropinone Reductase-Ii From
Caenorhabditis Elegans With Cofactor And Substrate
Length = 297
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 124/258 (48%), Gaps = 11/258 (4%)
Query: 377 SRLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEG--HQKIS 434
+R +GK ++T SS+GIG + A + EGA V I+ R E + + + + K G +KI+
Sbjct: 22 ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKIN 81
Query: 435 GVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPV-VECPENVWDKIFEVNVK 493
VV V + + + KFG IDILV+NA N A G + P ++ K F++N +
Sbjct: 82 AVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQ 141
Query: 494 STFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASE 553
+ +TQ+ ++ K Y+ +K AL T+ A DL
Sbjct: 142 AVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQH 201
Query: 554 NIRVNCLAPGITKTKFAAALYETEEAHEIAVS-------NVPMGRLAVPDEMGGIVAFLC 606
+RVN ++PG T F A+ E A + S +P+G P+E+ I+ FL
Sbjct: 202 GVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLA 261
Query: 607 SDD-ASYITGEVIVAAGG 623
+ +SYI G+ IVA GG
Sbjct: 262 DRNLSSYIIGQSIVADGG 279
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 92/190 (48%), Gaps = 3/190 (1%)
Query: 8 SRLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEG--HQKIS 65
+R +GK ++T SS+GIG + A + EGA V I+ R E + + + + K G +KI+
Sbjct: 22 ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKIN 81
Query: 66 GVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPV-VECPENVWDKIFEVNVK 124
VV V + + + KFG IDILV+NA N A G + P ++ K F++N +
Sbjct: 82 AVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQ 141
Query: 125 STFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASE 184
+ +TQ+ ++ K Y+ +K AL T+ A DL
Sbjct: 142 AVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQH 201
Query: 185 NIRVNCLAPG 194
+RVN ++PG
Sbjct: 202 GVRVNSVSPG 211
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGDRM-IAMLSTDKLYGGIDILV 699
Y+ +K AL T+ A DL +RVN ++PG + T F M + ++DKLY I
Sbjct: 180 YACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRK 239
Query: 700 SNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVL 738
V +P + +V+ + D NL SS+++ Q ++
Sbjct: 240 ECIPVGHCGKPEEIANIIVF--LADRNL-SSYIIGQSIV 275
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 692 YGGIDILVSNAAVNPANEPLVECSEV-VWDKIFDVNLKSSFLLTQEVLPYMRKKK 745
+G IDILV+NA N A+ V ++ K F +N ++ +TQ+ ++ K K
Sbjct: 104 FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK 158
>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
pdb|3O38|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
pdb|3O38|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
pdb|3O38|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
Length = 266
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 120/249 (48%), Gaps = 18/249 (7%)
Query: 379 LAGKVAVVTASSD-GIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVV 437
L GKV +VTA++ GIG A+R EGA VVIS E + + + L G ++ VV
Sbjct: 20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVV 79
Query: 438 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 497
C V E L +K G +D+LV+NA + T PVV+ + WD++ V + S
Sbjct: 80 CDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQT-PVVDMTDEEWDRVLNVTLTSVMR 138
Query: 498 LTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLG--------AYSVSKTALLGLTKAVAQD 549
T+ L Y R + +LG Y+ +K ++ LT+ A +
Sbjct: 139 ATRAALRYFRGVDHGGVIVNNA-------SVLGWRAQHSQSHYAAAKAGVMALTRCSAIE 191
Query: 550 LASENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDD 609
+R+N ++P I + KF +E +A S+ GR A P E+ +AFL SD
Sbjct: 192 AVEFGVRINAVSPSIARHKFLEKTSSSELLDRLA-SDEAFGRAAEPWEVAATIAFLASDY 250
Query: 610 ASYITGEVI 618
+SY+TGEV+
Sbjct: 251 SSYMTGEVV 259
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 90/195 (46%), Gaps = 17/195 (8%)
Query: 10 LTGKVAVVTASSD-GIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVV 68
L GKV +VTA++ GIG A+R EGA VVIS E + + + L G ++ VV
Sbjct: 20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVV 79
Query: 69 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 128
C V E L +K G +D+LV+NA + T PVV+ + WD++ V + S
Sbjct: 80 CDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQT-PVVDMTDEEWDRVLNVTLTSVMR 138
Query: 129 LTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLG--------AYSVSKTALLGLTKAVAQD 180
T+ L Y R + +LG Y+ +K ++ LT+ A +
Sbjct: 139 ATRAALRYFRGVDHGGVIVNNA-------SVLGWRAQHSQSHYAAAKAGVMALTRCSAIE 191
Query: 181 LASENIRVNCLAPGI 195
+R+N ++P I
Sbjct: 192 AVEFGVRINAVSPSI 206
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 693 GGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMR 742
G +D+LV+NA + P+V+ ++ WD++ +V L S T+ L Y R
Sbjct: 100 GRLDVLVNNAGLG-GQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFR 148
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGDRMIAMLSTDKLYGGIDILVS 700
Y+ +K + LT+ A + +R+N ++P + R KF ++ S+ +L +D L S
Sbjct: 174 YAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKT----SSSEL---LDRLAS 226
Query: 701 NAAVNPANEP 710
+ A A EP
Sbjct: 227 DEAFGRAAEP 236
>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase-
Reductase From Mycobacterium Tuberculosis
pdb|3GVC|B Chain B, Crystal Structure Of Probable Short-Chain Dehydrogenase-
Reductase From Mycobacterium Tuberculosis
pdb|3GVC|C Chain C, Crystal Structure Of Probable Short-Chain Dehydrogenase-
Reductase From Mycobacterium Tuberculosis
pdb|3GVC|D Chain D, Crystal Structure Of Probable Short-Chain Dehydrogenase-
Reductase From Mycobacterium Tuberculosis
Length = 277
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 124/258 (48%), Gaps = 14/258 (5%)
Query: 373 AVNASRLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQK 432
++N LAGKVA+VT + GIG A+A+RL+ EG V+ + + A +
Sbjct: 21 SMNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI------G 74
Query: 433 ISGVVCHVAKKEDRQ--KLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEV 490
C V +++Q + + FGG+D LV+NA V + E+ +D++ +
Sbjct: 75 CGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVED-FDRVIAI 133
Query: 491 NVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDL 550
N++ +L T+ P + +R GAY +SK ++ L++ A +L
Sbjct: 134 NLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAEL 193
Query: 551 ASENIRVNCLAPGITKT---KFAAALYETEEAHEIAVSNVP--MGRLAVPDEMGGIVAFL 605
S IR N L P T + A A+++ A S + GR+A P+EM GIV FL
Sbjct: 194 RSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFL 253
Query: 606 CSDDASYITGEVIVAAGG 623
SDDAS ITG +A GG
Sbjct: 254 LSDDASMITGTTQIADGG 271
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 9/192 (4%)
Query: 4 AVNASRLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQK 63
++N L GKVA+VT + GIG A+A+RL+ EG V+ + + A +
Sbjct: 21 SMNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI------G 74
Query: 64 ISGVVCHVAKKEDRQ--KLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEV 121
C V +++Q + + FGG+D LV+NA V + E+ +D++ +
Sbjct: 75 CGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVED-FDRVIAI 133
Query: 122 NVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDL 181
N++ +L T+ P + +R GAY +SK ++ L++ A +L
Sbjct: 134 NLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAEL 193
Query: 182 ASENIRVNCLAP 193
S IR N L P
Sbjct: 194 RSSGIRSNTLLP 205
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 692 YGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKK 744
+GG+D LV+NA V L++ + +D++ +NL+ ++L T+ P M ++
Sbjct: 101 FGGVDKLVANAGVVHL-ASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIER 152
>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a
Resolution
pdb|4AFN|B Chain B, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a
Resolution
pdb|4AFN|C Chain C, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a
Resolution
pdb|4AFN|D Chain D, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a
Resolution
pdb|4AG3|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa In Complex
With Nadph At 1.8a Resolution
pdb|4AG3|B Chain B, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa In Complex
With Nadph At 1.8a Resolution
pdb|4AG3|C Chain C, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa In Complex
With Nadph At 1.8a Resolution
pdb|4AG3|D Chain D, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa In Complex
With Nadph At 1.8a Resolution
Length = 269
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 120/246 (48%), Gaps = 4/246 (1%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L GKVA+VT +S GIG AIA L GA V+ ++ S K ETL+ G + +G+V
Sbjct: 25 LQGKVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEG-AGLVL 83
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
V+ E EH ++ G I+V+NA + +V ++ W + N+ S + L
Sbjct: 84 DVSSDESVAATLEHIQQHLGQPLIVVNNAGITRDN-LLVRMKDDEWFDVVNTNLNSLYRL 142
Query: 499 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 558
++ VL + K Y+ +K L G T+A+A+++ S I VN
Sbjct: 143 SKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITVN 202
Query: 559 CLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVI 618
+APG T L E + E + +P+GRL +E+ +V FL SD A+Y+TG +
Sbjct: 203 AVAPGFIDTDMTRELPEAQ--REALLGQIPLGRLGQAEEIAKVVGFLASDGAAYVTGATV 260
Query: 619 VAAGGM 624
GGM
Sbjct: 261 PVNGGM 266
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 89/185 (48%), Gaps = 2/185 (1%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L GKVA+VT +S GIG AIA L GA V+ ++ S K ETL+ G + +G+V
Sbjct: 25 LQGKVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEG-AGLVL 83
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
V+ E EH ++ G I+V+NA + +V ++ W + N+ S + L
Sbjct: 84 DVSSDESVAATLEHIQQHLGQPLIVVNNAGITRDN-LLVRMKDDEWFDVVNTNLNSLYRL 142
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
++ VL + K Y+ +K L G T+A+A+++ S I VN
Sbjct: 143 SKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITVN 202
Query: 190 CLAPG 194
+APG
Sbjct: 203 AVAPG 207
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
Y+ +K L G T+ +A ++ I VN +APG I T
Sbjct: 176 YAAAKAGLEGFTRALAREVGSRAITVNAVAPGFIDTDM 213
>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|D Chain D, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|A Chain A, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|B Chain B, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|E Chain E, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|F Chain F, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|G Chain G, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|H Chain H, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
Length = 258
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 132/259 (50%), Gaps = 22/259 (8%)
Query: 382 KVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQ--KEGHQKISGVVCH 439
KVA+VT + GIG I+++L+ +G + ++ + +A ET++ + QK V
Sbjct: 3 KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQE-EQAAETIKLIEAADQKAVFVGLD 61
Query: 440 VAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLT 499
V K + + A +K GG D+LV+NA + P++E E +I+ VNV S F
Sbjct: 62 VTDKANFDSAIDEAAEKLGGFDVLVNNAGI-AQIKPLLEVTEEDLKQIYSVNVFSVFFGI 120
Query: 500 QEVLPYIRKRNXXXXXXXXXXXXLAP-FKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 558
Q + F +L AYS +K A+ GLT+A AQ+LA + VN
Sbjct: 121 QAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVN 180
Query: 559 CLAPGITKTKFAAALYETEEAHEIAV-------------SNVPMGRLAVPDEMGGIVAFL 605
APGI T ++E +A + S++ +GR +VP+++ G+V+FL
Sbjct: 181 AYAPGIVGT----GMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFL 236
Query: 606 CSDDASYITGEVIVAAGGM 624
S++++Y+TG+V++ GGM
Sbjct: 237 ASENSNYVTGQVMLVDGGM 255
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 92/186 (49%), Gaps = 5/186 (2%)
Query: 13 KVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQ--KEGHQKISGVVCH 70
KVA+VT + GIG I+++L+A+G + ++ + +A ET++ + QK V
Sbjct: 3 KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQE-EQAAETIKLIEAADQKAVFVGLD 61
Query: 71 VAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLT 130
V K + + A +K GG D+LV+NA + P++E E +I+ VNV S F
Sbjct: 62 VTDKANFDSAIDEAAEKLGGFDVLVNNAGI-AQIKPLLEVTEEDLKQIYSVNVFSVFFGI 120
Query: 131 QEVLPYIRKRNXXXXXXXXXXXXLAP-FKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
Q + F +L AYS +K A+ GLT+A AQ+LA + VN
Sbjct: 121 QAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVN 180
Query: 190 CLAPGI 195
APGI
Sbjct: 181 AYAPGI 186
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%)
Query: 635 FRFIGAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGDRMIAMLS 687
F + AYS +K A+ GLT+ A++LAP+ VN APG++ T +++ A LS
Sbjct: 148 FPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELS 200
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 693 GGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQ 735
GG D+LV+NA + +PL+E +E +I+ VN+ S F Q
Sbjct: 80 GGFDVLVNNAGIAQI-KPLLEVTEEDLKQIYSVNVFSVFFGIQ 121
>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|B Chain B, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|C Chain C, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|D Chain D, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|E Chain E, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|F Chain F, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|G Chain G, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
pdb|1ZEM|H Chain H, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase
Length = 262
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 124/260 (47%), Gaps = 15/260 (5%)
Query: 378 RLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVV 437
+ GKV +VT + IG A A RL+ EG ++ + + KA +++++G + S V
Sbjct: 4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARS-YV 62
Query: 438 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 497
C V +E + + FG ID L +NA A PV + P + + ++ +NV F
Sbjct: 63 CDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFH 122
Query: 498 LTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 557
+ + V + +N + + AY SK A++ LT+ A DLA NIRV
Sbjct: 123 VLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRV 182
Query: 558 NCLAPGITKTKF-----------AAALYETEEAHEIA---VSNVPMGRLAVPDEMGGIVA 603
N ++PG F + Y + + +A + +VPM R +E+ G+VA
Sbjct: 183 NAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVA 242
Query: 604 FLCSDDASYITGEVIVAAGG 623
FL DD+S++TG + AGG
Sbjct: 243 FLLGDDSSFMTGVNLPIAGG 262
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 90/186 (48%), Gaps = 1/186 (0%)
Query: 9 RLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVV 68
+ GKV +VT + IG A A RL+ EG ++ + + KA +++++G + S V
Sbjct: 4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARS-YV 62
Query: 69 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 128
C V +E + + FG ID L +NA A PV + P + + ++ +NV F
Sbjct: 63 CDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFH 122
Query: 129 LTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 188
+ + V + +N + + AY SK A++ LT+ A DLA NIRV
Sbjct: 123 VLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRV 182
Query: 189 NCLAPG 194
N ++PG
Sbjct: 183 NAISPG 188
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 638 IGAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
+ AY SK A+ LT+ A DLAP NIRVN ++PG + F
Sbjct: 154 MAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGF 194
>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From
Staphylococcus Aureus Complex With Nadph
pdb|3SJ7|B Chain B, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From
Staphylococcus Aureus Complex With Nadph
Length = 252
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 128/246 (52%), Gaps = 9/246 (3%)
Query: 382 KVAVVTASSDGIGFAIAKRLSTEGASVVIS-SRKESNVNKAVETLQKEGHQKISGVVCHV 440
K A+VT +S GIG +IA +L+ EG +V ++ + + VE ++ +G + + +V
Sbjct: 11 KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFA-IQANV 69
Query: 441 AKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQ 500
A ++ + + + +FG +D+LV+NA + ++ E WD + + N+K F Q
Sbjct: 70 ADADEVKAMIKEVVSQFGSLDVLVNNAGITR-DNLLMRMKEQEWDDVIDTNLKGVFNCIQ 128
Query: 501 EVLP-YIRKRNXXXXXXXXXXXXLA-PFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 558
+ P +R+R+ + P + Y +K ++GLTK+ A++LAS I VN
Sbjct: 129 KATPQMLRQRSGAIINLSSVVGAVGNPGQ--ANYVATKAGVIGLTKSAARELASRGITVN 186
Query: 559 CLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVI 618
+APG + AL ++E E ++ +P+ R ++ VAFL SD A YITG+ I
Sbjct: 187 AVAPGFIVSDMTDAL--SDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTI 244
Query: 619 VAAGGM 624
GGM
Sbjct: 245 HVNGGM 250
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 97/185 (52%), Gaps = 7/185 (3%)
Query: 13 KVAVVTASSDGIGFAIAKRLSAEGASVVIS-SRKESNVNKAVETLQKEGHQKISGVVCHV 71
K A+VT +S GIG +IA +L+ EG +V ++ + + VE ++ +G + + +V
Sbjct: 11 KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFA-IQANV 69
Query: 72 AKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQ 131
A ++ + + + +FG +D+LV+NA + ++ E WD + + N+K F Q
Sbjct: 70 ADADEVKAMIKEVVSQFGSLDVLVNNAGITR-DNLLMRMKEQEWDDVIDTNLKGVFNCIQ 128
Query: 132 EVLP-YIRKRNXXXXXXXXXXXXLA-PFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
+ P +R+R+ + P + Y +K ++GLTK+ A++LAS I VN
Sbjct: 129 KATPQMLRQRSGAIINLSSVVGAVGNPGQ--ANYVATKAGVIGLTKSAARELASRGITVN 186
Query: 190 CLAPG 194
+APG
Sbjct: 187 AVAPG 191
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 692 YGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKKK 745
+G +D+LV+NA + N L+ E WD + D NLK F Q+ P M +++
Sbjct: 86 FGSLDVLVNNAGITRDN-LLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQR 138
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGDRM 682
Y +K + GLTK A +LA I VN +APG I + D +
Sbjct: 160 YVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL 201
>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|B Chain B, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|C Chain C, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|D Chain D, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|E Chain E, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|F Chain F, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|G Chain G, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|H Chain H, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|B Chain B, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|C Chain C, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|D Chain D, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|B Chain B, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|C Chain C, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|D Chain D, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
Length = 255
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 119/257 (46%), Gaps = 19/257 (7%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L GK A+VT S+ GIG IA+ L+ GA++V++ + A+ + + G + +
Sbjct: 2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVH---- 55
Query: 439 HVAKKEDR---QKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKST 495
H A D + LF AE++FGG+DILV+NA + PV + P WDKI +N+ +
Sbjct: 56 HPADLSDVAQIEALFALAEREFGGVDILVNNAGIQ-HVAPVEQFPLESWDKIIALNLSAV 114
Query: 496 FLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 555
F T+ LP +R RN L AY +K ++GLTK V + A+ N+
Sbjct: 115 FHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNV 174
Query: 556 RVNCLAPGITKTKFAAALYETEEA---------HEIAVSNVPMGRLAVPDEMGGIVAFLC 606
N + PG T + A H++ P P+ +G +V FLC
Sbjct: 175 TCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLC 234
Query: 607 SDDASYITGEVIVAAGG 623
S+ S + G GG
Sbjct: 235 SEAGSQVRGAAWNVDGG 251
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 96/188 (51%), Gaps = 10/188 (5%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L GK A+VT S+ GIG IA+ L+ GA++V++ + A+ + + G + +
Sbjct: 2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVH---- 55
Query: 70 HVAKKEDR---QKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKST 126
H A D + LF AE++FGG+DILV+NA + PV + P WDKI +N+ +
Sbjct: 56 HPADLSDVAQIEALFALAEREFGGVDILVNNAGIQ-HVAPVEQFPLESWDKIIALNLSAV 114
Query: 127 FLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 186
F T+ LP +R RN L AY +K ++GLTK V + A+ N+
Sbjct: 115 FHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNV 174
Query: 187 RVNCLAPG 194
N + PG
Sbjct: 175 TCNAICPG 182
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 689 DKLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKKK 745
++ +GG+DILV+NA + P+ + WDKI +NL + F T+ LP MR +
Sbjct: 74 EREFGGVDILVNNAGIQHV-APVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARN 129
Score = 33.5 bits (75), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 640 AYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGDRMI 683
AY +K + GLTKVV + A N+ N + PG + T + I
Sbjct: 150 AYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQI 193
>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And
Inhibitor Emodin
pdb|2RHR|A Chain A, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And
Inhibitor Emodin
Length = 277
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 124/260 (47%), Gaps = 25/260 (9%)
Query: 382 KVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 441
+VA+VT ++ GIG IA+RL EG V + +R E + ++ L++ G + G C V
Sbjct: 23 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEA-DGRTCDVR 81
Query: 442 KKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 501
+ + L +++G +D+LV+NA G E + +W + E N+ F +T++
Sbjct: 82 SVPEIEALVAAVVERYGPVDVLVNNAG-RLGGGATAELADELWLDVVETNLTGVFRVTKQ 140
Query: 502 VLP--------YIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASE 553
VL R N AP YS SK ++G TKA+ +LA
Sbjct: 141 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAP------YSASKHGVVGFTKALGLELART 194
Query: 554 NIRVNCLAPGITKTKFAAALYE---------TEEAHEIAVSNVPMGRLAVPDEMGGIVAF 604
I VN + PG +T AA++ E TEEA + + VP+GR P E+ +VA+
Sbjct: 195 GITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAY 254
Query: 605 LCSDDASYITGEVIVAAGGM 624
L A+ +T + + GG+
Sbjct: 255 LIGPGAAAVTAQALNVCGGL 274
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 89/190 (46%), Gaps = 16/190 (8%)
Query: 13 KVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 72
+VA+VT ++ GIG IA+RL EG V + +R E + ++ L++ G + G C V
Sbjct: 23 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEA-DGRTCDVR 81
Query: 73 KKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 132
+ + L +++G +D+LV+NA G E + +W + E N+ F +T++
Sbjct: 82 SVPEIEALVAAVVERYGPVDVLVNNAG-RLGGGATAELADELWLDVVETNLTGVFRVTKQ 140
Query: 133 VLP--------YIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASE 184
VL R N AP YS SK ++G TKA+ +LA
Sbjct: 141 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAP------YSASKHGVVGFTKALGLELART 194
Query: 185 NIRVNCLAPG 194
I VN + PG
Sbjct: 195 GITVNAVCPG 204
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 9/68 (13%)
Query: 618 IVAAGGMQSRLTKSTVEFRFIGA---------YSVSKTALFGLTKVVAEDLAPENIRVNC 668
++ AGGM R T V G YS SK + G TK + +LA I VN
Sbjct: 141 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 200
Query: 669 LAPGLIRT 676
+ PG + T
Sbjct: 201 VCPGFVET 208
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 692 YGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVL 738
YG +D+LV+NA E ++ +W + + NL F +T++VL
Sbjct: 97 YGPVDVLVNNAG-RLGGGATAELADELWLDVVETNLTGVFRVTKQVL 142
>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
pdb|2CFC|B Chain B, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
pdb|2CFC|C Chain C, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
pdb|2CFC|D Chain D, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
Length = 250
Score = 110 bits (274), Expect = 4e-24, Method: Composition-based stats.
Identities = 72/244 (29%), Positives = 110/244 (45%), Gaps = 2/244 (0%)
Query: 382 KVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 441
+VA+VT +S G G AIA R G V + + T K+ V VA
Sbjct: 3 RVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVA 62
Query: 442 KKEDRQKLFEHAEKKFGGIDILVSNAAV--NPATGPVVECPENVWDKIFEVNVKSTFLLT 499
+ D ++FG ID+LV+NA + N G + P +DK+ VNV+ FL
Sbjct: 63 DEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGC 122
Query: 500 QEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNC 559
+ VLP++ + L F AY+ SK A+L LTK+VA D A IR N
Sbjct: 123 RAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNA 182
Query: 560 LAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVIV 619
+ PG+ +T + E + ++ +P + ++ V FL +DA+Y+ G +V
Sbjct: 183 VCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGEDATYVNGAALV 242
Query: 620 AAGG 623
G
Sbjct: 243 MDGA 246
Score = 90.1 bits (222), Expect = 4e-18, Method: Composition-based stats.
Identities = 61/185 (32%), Positives = 86/185 (46%), Gaps = 2/185 (1%)
Query: 13 KVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 72
+VA+VT +S G G AIA R A G V + + T K+ V VA
Sbjct: 3 RVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVA 62
Query: 73 KKEDRQKLFEHAEKKFGGIDILVSNAAV--NPATGPVVECPENVWDKIFEVNVKSTFLLT 130
+ D ++FG ID+LV+NA + N G + P +DK+ VNV+ FL
Sbjct: 63 DEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGC 122
Query: 131 QEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNC 190
+ VLP++ + L F AY+ SK A+L LTK+VA D A IR N
Sbjct: 123 RAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNA 182
Query: 191 LAPGI 195
+ PG+
Sbjct: 183 VCPGM 187
Score = 39.7 bits (91), Expect = 0.007, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 679 GDRMIAMLSTDKLYGGIDILVSNAAVNPANEPLVECSEVV--WDKIFDVNLKSSFLLTQE 736
GD A+ +T + +G ID+LV+NA + +E V + V +DK+ VN++ FL +
Sbjct: 65 GDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRA 124
Query: 737 VLPYM 741
VLP+M
Sbjct: 125 VLPHM 129
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 26/46 (56%)
Query: 631 STVEFRFIGAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
S V F AY+ SK A+ LTK VA D A IR N + PG+I T
Sbjct: 145 SLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIET 190
>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
pdb|3CSD|A Chain A, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
pdb|3QRW|A Chain A, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph
pdb|3QRW|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph
pdb|3RI3|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
pdb|3RI3|A Chain A, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
Length = 281
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 124/260 (47%), Gaps = 25/260 (9%)
Query: 382 KVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 441
+VA+VT ++ GIG IA+RL EG V + +R E + ++ L++ G + G C V
Sbjct: 27 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEA-DGRTCDVR 85
Query: 442 KKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 501
+ + L +++G +D+LV+NA G E + +W + E N+ F +T++
Sbjct: 86 SVPEIEALVAAVVERYGPVDVLVNNAG-RLGGGATAELADELWLDVVETNLTGVFRVTKQ 144
Query: 502 VLP--------YIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASE 553
VL R N AP YS SK ++G TKA+ +LA
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAP------YSASKHGVVGFTKALGLELART 198
Query: 554 NIRVNCLAPGITKTKFAAALYE---------TEEAHEIAVSNVPMGRLAVPDEMGGIVAF 604
I VN + PG +T AA++ E TEEA + + VP+GR P E+ +VA+
Sbjct: 199 GITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAY 258
Query: 605 LCSDDASYITGEVIVAAGGM 624
L A+ +T + + GG+
Sbjct: 259 LIGPGAAAVTAQALNVCGGL 278
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 89/190 (46%), Gaps = 16/190 (8%)
Query: 13 KVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 72
+VA+VT ++ GIG IA+RL EG V + +R E + ++ L++ G + G C V
Sbjct: 27 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEA-DGRTCDVR 85
Query: 73 KKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 132
+ + L +++G +D+LV+NA G E + +W + E N+ F +T++
Sbjct: 86 SVPEIEALVAAVVERYGPVDVLVNNAG-RLGGGATAELADELWLDVVETNLTGVFRVTKQ 144
Query: 133 VLP--------YIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASE 184
VL R N AP YS SK ++G TKA+ +LA
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAP------YSASKHGVVGFTKALGLELART 198
Query: 185 NIRVNCLAPG 194
I VN + PG
Sbjct: 199 GITVNAVCPG 208
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 9/68 (13%)
Query: 618 IVAAGGMQSRLTKSTVEFRFIGA---------YSVSKTALFGLTKVVAEDLAPENIRVNC 668
++ AGGM R T V G YS SK + G TK + +LA I VN
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 204
Query: 669 LAPGLIRT 676
+ PG + T
Sbjct: 205 VCPGFVET 212
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 692 YGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVL 738
YG +D+LV+NA E ++ +W + + NL F +T++VL
Sbjct: 101 YGPVDVLVNNAG-RLGGGATAELADELWLDVVETNLTGVFRVTKQVL 146
>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From
Rhizobium Etli Cfn 42
pdb|4DQX|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase From
Rhizobium Etli Cfn 42
pdb|4DQX|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase From
Rhizobium Etli Cfn 42
pdb|4DQX|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase From
Rhizobium Etli Cfn 42
Length = 277
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 116/248 (46%), Gaps = 13/248 (5%)
Query: 382 KVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 441
+V +VT GIG A A+ + GA VV++ + N + AV + G K GV V+
Sbjct: 28 RVCIVTGGGSGIGRATAELFAKNGAYVVVA---DVNEDAAVRVANEIG-SKAFGVRVDVS 83
Query: 442 KKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 501
+D + E K+G +D+LV+NA TG VV PE WD+I VNVK FL ++
Sbjct: 84 SAKDAESXVEKTTAKWGRVDVLVNNAGFGT-TGNVVTIPEETWDRIXSVNVKGIFLCSKY 142
Query: 502 VLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCLA 561
V+P R+ + AY SK A+ LT+A A D A E IRVN +A
Sbjct: 143 VIPVXRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAXAXDHAKEGIRVNAVA 202
Query: 562 PGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPD------EMGGIVAFLCSDDASYITG 615
PG + + ++ EA + A AV D E+ FL SD + + TG
Sbjct: 203 PGTIDSPYFTKIF--AEAKDPAKLRSDFNARAVXDRXGTAEEIAEAXLFLASDRSRFATG 260
Query: 616 EVIVAAGG 623
++ GG
Sbjct: 261 SILTVDGG 268
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 92/185 (49%), Gaps = 5/185 (2%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L +V +VT GIG A A+ + GA VV++ + N + AV + G K GV
Sbjct: 25 LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVA---DVNEDAAVRVANEIG-SKAFGVRV 80
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
V+ +D + E K+G +D+LV+NA TG VV PE WD+I VNVK FL
Sbjct: 81 DVSSAKDAESXVEKTTAKWGRVDVLVNNAGFGT-TGNVVTIPEETWDRIXSVNVKGIFLC 139
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
++ V+P R+ + AY SK A+ LT+A A D A E IRVN
Sbjct: 140 SKYVIPVXRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAXAXDHAKEGIRVN 199
Query: 190 CLAPG 194
+APG
Sbjct: 200 AVAPG 204
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 692 YGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRK 743
+G +D+LV+NA +V E WD+I VN+K FL ++ V+P R+
Sbjct: 99 WGRVDVLVNNAGFGTTGN-VVTIPEETWDRIXSVNVKGIFLCSKYVIPVXRR 149
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 640 AYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGDRMIA 684
AY SK A+ LT+ A D A E IRVN +APG I + + ++ A
Sbjct: 172 AYVASKGAISSLTRAXAXDHAKEGIRVNAVAPGTIDSPYFTKIFA 216
>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate
Dehydrogenase
pdb|1WMB|B Chain B, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate
Dehydrogenase
pdb|1X1T|A Chain A, Crystal Structure Of D-3-hydroxybutyrate Dehydrogenase
From Pseudomonas Fragi Complexed With Nad+
pdb|2ZTL|A Chain A, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTL|B Chain B, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTL|C Chain C, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTL|D Chain D, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTV|A Chain A, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
pdb|2ZTV|B Chain B, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
pdb|2ZTV|C Chain C, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
pdb|2ZTV|D Chain D, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
Length = 260
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 124/260 (47%), Gaps = 12/260 (4%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKE-SNVNKAVETLQKEGHQKISGVV 437
L GKVAVVT S+ GIG IA L+ +GA +V++ + + + K L + K+
Sbjct: 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 438 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 497
++K E + L ++A ++ G IDILV+NA + T + + P WD I +N+ + F
Sbjct: 62 ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQH-TALIEDFPTEKWDAILALNLSAVFH 120
Query: 498 LTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 557
T LP+++K+ L AY +K ++G TK A + A + I
Sbjct: 121 GTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITA 180
Query: 558 NCLAPGITKT----KFAAALYETE------EAHEIAVSNVPMGRLAVPDEMGGIVAFLCS 607
N + PG +T K +AL E A E+ P + P+++GG FL S
Sbjct: 181 NAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLAS 240
Query: 608 DDASYITGEVIVAAGGMQSR 627
D A+ ITG + GG +R
Sbjct: 241 DAAAQITGTTVSVDGGWTAR 260
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 93/186 (50%), Gaps = 2/186 (1%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKE-SNVNKAVETLQKEGHQKISGVV 68
L GKVAVVT S+ GIG IA L+A+GA +V++ + + + K L + K+
Sbjct: 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 69 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 128
++K E + L ++A ++ G IDILV+NA + T + + P WD I +N+ + F
Sbjct: 62 ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQH-TALIEDFPTEKWDAILALNLSAVFH 120
Query: 129 LTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 188
T LP+++K+ L AY +K ++G TK A + A + I
Sbjct: 121 GTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITA 180
Query: 189 NCLAPG 194
N + PG
Sbjct: 181 NAICPG 186
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 690 KLYGGIDILVSNAAVNPANEPLVECSEV-VWDKIFDVNLKSSFLLTQEVLPYMRKK 744
+ G IDILV+NA + + L+E WD I +NL + F T LP+M+K+
Sbjct: 79 RQMGRIDILVNNAGIQ--HTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ 132
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 640 AYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGDRMIAMLS 687
AY +K + G TKV A + A + I N + PG +RT ++ I+ L+
Sbjct: 154 AYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALA 201
>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa
Reductase
pdb|1YXM|B Chain B, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa
Reductase
pdb|1YXM|C Chain C, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa
Reductase
pdb|1YXM|D Chain D, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa
Reductase
Length = 303
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 119/251 (47%), Gaps = 8/251 (3%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKE----GHQKIS 434
L G+VA+VT + GIG AI K L G++VVI+SRK + A + LQ ++
Sbjct: 16 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 75
Query: 435 GVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKS 494
+ C++ +E+ L + FG I+ LV+N P W + E N+
Sbjct: 76 PIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGG-GQFLSPAEHISSKGWHAVLETNLTG 134
Query: 495 TFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASEN 554
TF + + V K + A F L ++ + LTK++A + A
Sbjct: 135 TFYMCKAVYSSWMKEHGGSIVNIIVPTK-AGFPLAVHSGAARAGVYNLTKSLALEWACSG 193
Query: 555 IRVNCLAPGITKTKFAAALYET--EEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASY 612
IR+NC+APG+ ++ A Y + + E + +P R+ VP+E+ +V FL S AS+
Sbjct: 194 IRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASF 253
Query: 613 ITGEVIVAAGG 623
ITG+ + GG
Sbjct: 254 ITGQSVDVDGG 264
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 87/190 (45%), Gaps = 6/190 (3%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKE----GHQKIS 65
L G+VA+VT + GIG AI K L G++VVI+SRK + A + LQ ++
Sbjct: 16 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 75
Query: 66 GVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKS 125
+ C++ +E+ L + FG I+ LV+N P W + E N+
Sbjct: 76 PIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGG-GQFLSPAEHISSKGWHAVLETNLTG 134
Query: 126 TFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASEN 185
TF + + V K + A F L ++ + LTK++A + A
Sbjct: 135 TFYMCKAVYSSWMKEHGGSIVNIIVPTK-AGFPLAVHSGAARAGVYNLTKSLALEWACSG 193
Query: 186 IRVNCLAPGI 195
IR+NC+APG+
Sbjct: 194 IRINCVAPGV 203
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%)
Query: 644 SKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTK 677
++ ++ LTK +A + A IR+NC+APG+I ++
Sbjct: 174 ARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQ 207
>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase
Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QIV|B Chain B, Crystal Structure Of A Putative Short-Chain Dehydrogenase
Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
Length = 253
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 120/252 (47%), Gaps = 7/252 (2%)
Query: 378 RLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVV 437
R KV +VT S GIG A A+ L+ EGA+VV++ + + +G IS V
Sbjct: 6 RFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAIS-VA 64
Query: 438 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPAT--GPVVECPENVWDKIFEVNVKST 495
V+ E + + + +FGGID LV+NAA+ ++ + K VN+
Sbjct: 65 VDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGA 124
Query: 496 FLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 555
T+ V + KR A + Y ++K + GLT+ ++++L NI
Sbjct: 125 LWCTRAVYKKMTKRGGGAIVNQSST---AAWLYSNYYGLAKVGINGLTQQLSRELGGRNI 181
Query: 556 RVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITG 615
R+N +APG T+ E +I V +P+ R+ PD++ G+ FL SD+AS+ITG
Sbjct: 182 RINAIAPGPIDTEANRTTTPKEMVDDI-VKGLPLSRMGTPDDLVGMCLFLLSDEASWITG 240
Query: 616 EVIVAAGGMQSR 627
++ GG R
Sbjct: 241 QIFNVDGGQIIR 252
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 87/188 (46%), Gaps = 6/188 (3%)
Query: 9 RLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVV 68
R KV +VT S GIG A A+ L+ EGA+VV++ + + +G IS V
Sbjct: 6 RFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAIS-VA 64
Query: 69 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPAT--GPVVECPENVWDKIFEVNVKST 126
V+ E + + + +FGGID LV+NAA+ ++ + K VN+
Sbjct: 65 VDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGA 124
Query: 127 FLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 186
T+ V + KR A + Y ++K + GLT+ ++++L NI
Sbjct: 125 LWCTRAVYKKMTKRGGGAIVNQSST---AAWLYSNYYGLAKVGINGLTQQLSRELGGRNI 181
Query: 187 RVNCLAPG 194
R+N +APG
Sbjct: 182 RINAIAPG 189
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 631 STVEFRFIGAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTK 677
ST + + Y ++K + GLT+ ++ +L NIR+N +APG I T+
Sbjct: 148 STAAWLYSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTE 194
>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And
Pseudotropine
pdb|2AE2|B Chain B, Tropinone Reductase-Ii Complexed With Nadp+ And
Pseudotropine
pdb|2AE1|A Chain A, Tropinone Reductase-Ii
Length = 260
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 125/257 (48%), Gaps = 16/257 (6%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L G A+VT S GIG+ I + L++ GASV SR + +N + + +G K+ VC
Sbjct: 7 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGF-KVEASVC 65
Query: 439 HVAKKEDRQKLFEHAEKKFGG-IDILVSNAAV---NPATGPVVECPENVWDKIFEVNVKS 494
++ + +RQ+L F G ++ILV+NA + A VE + I +N ++
Sbjct: 66 DLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVE----DYSLIMSINFEA 121
Query: 495 TFLLTQEVLPYIR--KRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLAS 552
+ L+ P+++ +R P++ Y +K A+ LT+ +A + A
Sbjct: 122 AYHLSVLAHPFLKASERGNVVFISSVSGALAVPYE--AVYGATKGAMDQLTRCLAFEWAK 179
Query: 553 ENIRVNCLAPGITKTKFAAALYETEEAHE---IAVSNVPMGRLAVPDEMGGIVAFLCSDD 609
+NIRVN + PG+ T + E E + + R+ P E+ +VAFLC
Sbjct: 180 DNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPA 239
Query: 610 ASYITGEVIVAAGGMQS 626
ASY+TG++I GG+ +
Sbjct: 240 ASYVTGQIIYVDGGLMA 256
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 95/192 (49%), Gaps = 13/192 (6%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L G A+VT S GIG+ I + L++ GASV SR + +N + + +G K+ VC
Sbjct: 7 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGF-KVEASVC 65
Query: 70 HVAKKEDRQKLFEHAEKKFGG-IDILVSNAAV---NPATGPVVECPENVWDKIFEVNVKS 125
++ + +RQ+L F G ++ILV+NA + A VE + I +N ++
Sbjct: 66 DLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVE----DYSLIMSINFEA 121
Query: 126 TFLLTQEVLPYIR--KRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLAS 183
+ L+ P+++ +R P++ Y +K A+ LT+ +A + A
Sbjct: 122 AYHLSVLAHPFLKASERGNVVFISSVSGALAVPYE--AVYGATKGAMDQLTRCLAFEWAK 179
Query: 184 ENIRVNCLAPGI 195
+NIRVN + PG+
Sbjct: 180 DNIRVNGVGPGV 191
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
Y +K A+ LT+ +A + A +NIRVN + PG+I T
Sbjct: 159 YGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSL 196
>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein
pdb|4FGS|B Chain B, Crystal Structure Of A Probable Dehydrogenase Protein
pdb|4FGS|C Chain C, Crystal Structure Of A Probable Dehydrogenase Protein
pdb|4FGS|D Chain D, Crystal Structure Of A Probable Dehydrogenase Protein
Length = 273
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 118/254 (46%), Gaps = 13/254 (5%)
Query: 378 RLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVV 437
RL K+AV+T ++ GIG A AKR EGA V I+ R++ ++ A+ + G + G+
Sbjct: 26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---GGGAV-GIQ 81
Query: 438 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 497
A + +L+E + + G ID+L NA P+ E E +D F+ NVK
Sbjct: 82 ADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSXL-PLGEVTEEQYDDTFDRNVKGVLF 140
Query: 498 LTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 557
Q+ LP + + + P Y+ SK AL + DL IR+
Sbjct: 141 TVQKALPLLARGSSVVLTGSTAGSTGTP--AFSVYAASKAALRSFARNWILDLKDRGIRI 198
Query: 558 NCLAPGITKTKFAAALYETEEAHEIAVSN-----VPMGRLAVPDEMGGIVAFLCSDDASY 612
N L+PG T+T L + + + N VP GR+ +E+ FL SDD+S+
Sbjct: 199 NTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPXGRVGRAEEVAAAALFLASDDSSF 258
Query: 613 ITG-EVIVAAGGMQ 625
+TG E+ V G Q
Sbjct: 259 VTGAELFVDGGSAQ 272
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 87/186 (46%), Gaps = 7/186 (3%)
Query: 9 RLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVV 68
RL K+AV+T ++ GIG A AKR AEGA V I+ R++ ++ A+ + G + G+
Sbjct: 26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---GGGAV-GIQ 81
Query: 69 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 128
A + +L+E + + G ID+L NA P+ E E +D F+ NVK
Sbjct: 82 ADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSXL-PLGEVTEEQYDDTFDRNVKGVLF 140
Query: 129 LTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 188
Q+ LP + + + P Y+ SK AL + DL IR+
Sbjct: 141 TVQKALPLLARGSSVVLTGSTAGSTGTP--AFSVYAASKAALRSFARNWILDLKDRGIRI 198
Query: 189 NCLAPG 194
N L+PG
Sbjct: 199 NTLSPG 204
Score = 36.6 bits (83), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Query: 689 DKLY-------GGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYM 741
D+LY G ID+L NA + PL E +E +D FD N+K Q+ LP +
Sbjct: 91 DRLYEKVKAEAGRIDVLFVNAG-GGSXLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLL 149
Query: 742 RK 743
+
Sbjct: 150 AR 151
>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph
pdb|1IPE|B Chain B, Tropinone Reductase-Ii Complexed With Nadph
pdb|1IPF|A Chain A, Tropinone Reductase-Ii Complexed With Nadph And Tropinone
pdb|1IPF|B Chain B, Tropinone Reductase-Ii Complexed With Nadph And Tropinone
Length = 259
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 125/257 (48%), Gaps = 16/257 (6%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L G A+VT S GIG+ I + L++ GASV SR + +N + + +G K+ VC
Sbjct: 6 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGF-KVEASVC 64
Query: 439 HVAKKEDRQKLFEHAEKKFGG-IDILVSNAAV---NPATGPVVECPENVWDKIFEVNVKS 494
++ + +RQ+L F G ++ILV+NA + A VE + I +N ++
Sbjct: 65 DLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVE----DYSLIMSINFEA 120
Query: 495 TFLLTQEVLPYIR--KRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLAS 552
+ L+ P+++ +R P++ Y +K A+ LT+ +A + A
Sbjct: 121 AYHLSVLAHPFLKASERGNVVFISSVSGALAVPYE--AVYGATKGAMDQLTRCLAFEWAK 178
Query: 553 ENIRVNCLAPGITKTKFAAALYETEEAHE---IAVSNVPMGRLAVPDEMGGIVAFLCSDD 609
+NIRVN + PG+ T + E E + + R+ P E+ +VAFLC
Sbjct: 179 DNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPA 238
Query: 610 ASYITGEVIVAAGGMQS 626
ASY+TG++I GG+ +
Sbjct: 239 ASYVTGQIIYVDGGLMA 255
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 95/192 (49%), Gaps = 13/192 (6%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L G A+VT S GIG+ I + L++ GASV SR + +N + + +G K+ VC
Sbjct: 6 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGF-KVEASVC 64
Query: 70 HVAKKEDRQKLFEHAEKKFGG-IDILVSNAAV---NPATGPVVECPENVWDKIFEVNVKS 125
++ + +RQ+L F G ++ILV+NA + A VE + I +N ++
Sbjct: 65 DLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVE----DYSLIMSINFEA 120
Query: 126 TFLLTQEVLPYIR--KRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLAS 183
+ L+ P+++ +R P++ Y +K A+ LT+ +A + A
Sbjct: 121 AYHLSVLAHPFLKASERGNVVFISSVSGALAVPYE--AVYGATKGAMDQLTRCLAFEWAK 178
Query: 184 ENIRVNCLAPGI 195
+NIRVN + PG+
Sbjct: 179 DNIRVNGVGPGV 190
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGDRMI 683
Y +K A+ LT+ +A + A +NIRVN + PG+I T + I
Sbjct: 158 YGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTI 200
>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg
From Francisella Tularensis
pdb|3LYL|B Chain B, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg
From Francisella Tularensis
pdb|3LYL|C Chain C, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg
From Francisella Tularensis
pdb|3LYL|D Chain D, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg
From Francisella Tularensis
Length = 247
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 121/242 (50%), Gaps = 4/242 (1%)
Query: 382 KVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 441
KVA+VT +S GIGF +A L+++GA+VV ++ +++ K E KE K G+V +++
Sbjct: 6 KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEK-FENSXKEKGFKARGLVLNIS 64
Query: 442 KKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 501
E Q F + + IDILV+NA + E+ W + N+ S F ++E
Sbjct: 65 DIESIQNFFAEIKAENLAIDILVNNAGITR-DNLXXRXSEDEWQSVINTNLSSIFRXSKE 123
Query: 502 VLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCLA 561
+ K+ A Y +K ++G +K++A ++AS NI VN +A
Sbjct: 124 CVRGXXKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVA 183
Query: 562 PGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVIVAA 621
PG T L T+E + +P G++ P ++ VAFL S++A YITG+ +
Sbjct: 184 PGFIATDXTDKL--TDEQKSFIATKIPSGQIGEPKDIAAAVAFLASEEAKYITGQTLHVN 241
Query: 622 GG 623
GG
Sbjct: 242 GG 243
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 92/185 (49%), Gaps = 2/185 (1%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L KVA+VT +S GIGF +A L+++GA+VV ++ +++ K E KE K G+V
Sbjct: 3 LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEK-FENSXKEKGFKARGLVL 61
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
+++ E Q F + + IDILV+NA + E+ W + N+ S F
Sbjct: 62 NISDIESIQNFFAEIKAENLAIDILVNNAGITR-DNLXXRXSEDEWQSVINTNLSSIFRX 120
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
++E + K+ A Y +K ++G +K++A ++AS NI VN
Sbjct: 121 SKECVRGXXKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNITVN 180
Query: 190 CLAPG 194
+APG
Sbjct: 181 VVAPG 185
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 695 IDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKKK 745
IDILV+NA + N SE W + + NL S F ++E + KK+
Sbjct: 83 IDILVNNAGITRDN-LXXRXSEDEWQSVINTNLSSIFRXSKECVRGXXKKR 132
>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate
5- Dehydrogenase From Beutenbergia Cavernae(Efi Target
Efi-502044) With Bound Nadp (Low Occupancy)
pdb|3UF0|B Chain B, Crystal Structure Of A Putative Nad(P) Dependent Gluconate
5- Dehydrogenase From Beutenbergia Cavernae(Efi Target
Efi-502044) With Bound Nadp (Low Occupancy)
Length = 273
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 121/248 (48%), Gaps = 10/248 (4%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
LAG+ AVVT + GIG AIA + GA V+ R + K V +G VV
Sbjct: 29 LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGV--KEVADEIADGGGSAEAVVA 86
Query: 439 HVAKKEDRQKLFEH--AEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 496
+A E + E A ++ +D+LV+NA + A P E W ++ VN+ + +
Sbjct: 87 DLADLEGAANVAEELAATRR---VDVLVNNAGI-IARAPAEEVSLGRWREVLTVNLDAAW 142
Query: 497 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 556
+L++ + + + AY+ SK A++GLT+A+A + A +
Sbjct: 143 VLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVG 202
Query: 557 VNCLAPGITKTKFAAALY-ETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITG 615
VN LAPG T AAL + E A EI + +P GR A P++M G FL SD ASY+ G
Sbjct: 203 VNALAPGYVVTANTAALRADDERAAEI-TARIPAGRWATPEDMVGPAVFLASDAASYVHG 261
Query: 616 EVIVAAGG 623
+V+ GG
Sbjct: 262 QVLAVDGG 269
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 86/187 (45%), Gaps = 8/187 (4%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L G+ AVVT + GIG AIA + GA V+ R + K V +G VV
Sbjct: 29 LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGV--KEVADEIADGGGSAEAVVA 86
Query: 70 HVAKKEDRQKLFEH--AEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 127
+A E + E A ++ +D+LV+NA + A P E W ++ VN+ + +
Sbjct: 87 DLADLEGAANVAEELAATRR---VDVLVNNAGI-IARAPAEEVSLGRWREVLTVNLDAAW 142
Query: 128 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 187
+L++ + + + AY+ SK A++GLT+A+A + A +
Sbjct: 143 VLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVG 202
Query: 188 VNCLAPG 194
VN LAPG
Sbjct: 203 VNALAPG 209
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 636 RFIGAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
R + AY+ SK A+ GLT+ +A + A + VN LAPG + T
Sbjct: 173 RNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVT 213
>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|A Chain A, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|D Chain D, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|C Chain C, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|F Chain F, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|E Chain E, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|H Chain H, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|G Chain G, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
Length = 271
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 124/261 (47%), Gaps = 22/261 (8%)
Query: 377 SRLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGV 436
+ L KVA++T + GIG ++ L+ GA VV++ E+++ A ++ + G
Sbjct: 7 AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGR-------GA 59
Query: 437 VCHVAKKEDR---QKLFEHAEKKFGGIDILVSNAA-VNPATGPVVECPENVWDKIFEVNV 492
V HV + + L + FG +DI+ +NAA +PA V + +VWD F VN
Sbjct: 60 VHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNA 119
Query: 493 KSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLAS 552
+ T L+ + +P + A + + AY+ +K A+ LT+ VA
Sbjct: 120 RGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGR 179
Query: 553 ENIRVNCLAPGITKTK-----FAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCS 607
+R N +APG+ +T + + H +A GR+ P E+ +V FL S
Sbjct: 180 HGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLA------GRIGEPHEIAELVCFLAS 233
Query: 608 DDASYITGEVIVAAGGMQSRL 628
D A++ITG+VI A G+ + L
Sbjct: 234 DRAAFITGQVIAADSGLLAHL 254
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 11/192 (5%)
Query: 8 SRLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGV 67
+ L KVA++T + GIG ++ L+ GA VV++ E+++ A ++ + G
Sbjct: 7 AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGR-------GA 59
Query: 68 VCHVAKKEDR---QKLFEHAEKKFGGIDILVSNAA-VNPATGPVVECPENVWDKIFEVNV 123
V HV + + L + FG +DI+ +NAA +PA V + +VWD F VN
Sbjct: 60 VHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNA 119
Query: 124 KSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLAS 183
+ T L+ + +P + A + + AY+ +K A+ LT+ VA
Sbjct: 120 RGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGR 179
Query: 184 ENIRVNCLAPGI 195
+R N +APG+
Sbjct: 180 HGVRCNAIAPGL 191
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 612 YITGEVIVAAGGMQSRLTKSTVE--FRFIGAYSVSKTALFGLTKVVAEDLAPENIRVNCL 669
Y +I A GG ++ +T + AY+ +K A+ LT+ VA +R N +
Sbjct: 128 YAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAI 187
Query: 670 APGLIRT 676
APGL+RT
Sbjct: 188 APGLVRT 194
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 692 YGGIDILVSNAA-VNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYM 741
+G +DI+ +NAA +PA+ + + + VWD F VN + + L+ + +P +
Sbjct: 83 FGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRL 133
>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase
pdb|2ZTM|B Chain B, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase
pdb|2ZTM|C Chain C, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase
pdb|2ZTM|D Chain D, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Length = 260
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 124/260 (47%), Gaps = 12/260 (4%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKE-SNVNKAVETLQKEGHQKISGVV 437
L GKVAVVT S+ GIG IA L+ +GA +V++ + + + K L + K+
Sbjct: 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 438 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 497
++K E + L ++A ++ G IDILV+NA + T + + P WD I +N+ + F
Sbjct: 62 ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQH-TALIEDFPTEKWDAILALNLSAVFH 120
Query: 498 LTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 557
T LP+++K+ L AY +K ++G TK A + A + I
Sbjct: 121 GTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITA 180
Query: 558 NCLAPGITKT----KFAAALYETE------EAHEIAVSNVPMGRLAVPDEMGGIVAFLCS 607
N + PG ++ K +AL E A E+ P + P+++GG FL S
Sbjct: 181 NAICPGWVRSPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLAS 240
Query: 608 DDASYITGEVIVAAGGMQSR 627
D A+ ITG + GG +R
Sbjct: 241 DAAAQITGTTVSVDGGWTAR 260
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 93/186 (50%), Gaps = 2/186 (1%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKE-SNVNKAVETLQKEGHQKISGVV 68
L GKVAVVT S+ GIG IA L+A+GA +V++ + + + K L + K+
Sbjct: 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 69 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 128
++K E + L ++A ++ G IDILV+NA + T + + P WD I +N+ + F
Sbjct: 62 ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQH-TALIEDFPTEKWDAILALNLSAVFH 120
Query: 129 LTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 188
T LP+++K+ L AY +K ++G TK A + A + I
Sbjct: 121 GTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITA 180
Query: 189 NCLAPG 194
N + PG
Sbjct: 181 NAICPG 186
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 690 KLYGGIDILVSNAAVNPANEPLVECSEV-VWDKIFDVNLKSSFLLTQEVLPYMRKK 744
+ G IDILV+NA + + L+E WD I +NL + F T LP+M+K+
Sbjct: 79 RQMGRIDILVNNAGIQ--HTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ 132
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 640 AYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGDRMIAMLS 687
AY +K + G TKV A + A + I N + PG +R+ ++ I+ L+
Sbjct: 154 AYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRSPLVEKQISALA 201
>pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor'
pdb|3IMF|B Chain B, 1.99 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor'
pdb|3IMF|C Chain C, 1.99 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor'
pdb|3IMF|D Chain D, 1.99 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor'
Length = 257
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 127/250 (50%), Gaps = 11/250 (4%)
Query: 382 KVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKA-VETLQKEGHQKISGVVCHV 440
KV ++T S G G A R + EGA VVI+ R + + +A +E Q G +I V V
Sbjct: 7 KVVIITGGSSGXGKGXATRFAKEGARVVITGRTKEKLEEAKLEIEQFPG--QILTVQXDV 64
Query: 441 AKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQ 500
+D QK E ++KFG IDIL++NAA N P + N W+ + + + TF +Q
Sbjct: 65 RNTDDIQKXIEQIDEKFGRIDILINNAAGNFIC-PAEDLSVNGWNSVINIVLNGTFYCSQ 123
Query: 501 EVLPY-IRK--RNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASE-NIR 556
+ Y I K + P + A +K +L TK +A + + IR
Sbjct: 124 AIGKYWIEKGIKGNIINXVATYAWDAGPGVIHSA--AAKAGVLAXTKTLAVEWGRKYGIR 181
Query: 557 VNCLAPG-ITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITG 615
VN +APG I +T A L+ +EE + + +VP+GRL P+E+ G+ +LCSD+A+YI G
Sbjct: 182 VNAIAPGPIERTGGADKLWISEEXAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEAAYING 241
Query: 616 EVIVAAGGMQ 625
GG
Sbjct: 242 TCXTXDGGQH 251
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 90/187 (48%), Gaps = 10/187 (5%)
Query: 13 KVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKA-VETLQKEGHQKISGVVCHV 71
KV ++T S G G A R + EGA VVI+ R + + +A +E Q G +I V V
Sbjct: 7 KVVIITGGSSGXGKGXATRFAKEGARVVITGRTKEKLEEAKLEIEQFPG--QILTVQXDV 64
Query: 72 AKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQ 131
+D QK E ++KFG IDIL++NAA N P + N W+ + + + TF +Q
Sbjct: 65 RNTDDIQKXIEQIDEKFGRIDILINNAAGNFIC-PAEDLSVNGWNSVINIVLNGTFYCSQ 123
Query: 132 EVLPY-IRK--RNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASE-NIR 187
+ Y I K + P + A +K +L TK +A + + IR
Sbjct: 124 AIGKYWIEKGIKGNIINXVATYAWDAGPGVIHSA--AAKAGVLAXTKTLAVEWGRKYGIR 181
Query: 188 VNCLAPG 194
VN +APG
Sbjct: 182 VNAIAPG 188
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 7/59 (11%)
Query: 689 DKLYGGIDILVSNAAVN---PANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKK 744
D+ +G IDIL++NAA N PA + V W+ + ++ L +F +Q + Y +K
Sbjct: 78 DEKFGRIDILINNAAGNFICPAEDLSVNG----WNSVINIVLNGTFYCSQAIGKYWIEK 132
>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus
Thuringiensis
pdb|3I4F|B Chain B, Structure Of Putative 3-oxoacyl-reductase From Bacillus
Thuringiensis
pdb|3I4F|C Chain C, Structure Of Putative 3-oxoacyl-reductase From Bacillus
Thuringiensis
pdb|3I4F|D Chain D, Structure Of Putative 3-oxoacyl-reductase From Bacillus
Thuringiensis
Length = 264
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 125/248 (50%), Gaps = 17/248 (6%)
Query: 384 AVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAKK 443
A++TA + G+G + ++L +G SV ++ ++ + ++ K+ +++ V V KK
Sbjct: 10 ALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKK 69
Query: 444 EDRQKLFEHAEKKFGGIDILVSNAAVNPATGP-------VVECPENVWDKIFEVNVKSTF 496
ED K+ E A FG ID L++NA GP +V+ E+ W+++ + N+ + F
Sbjct: 70 EDLHKIVEEAMSHFGKIDFLINNA------GPYVFERKKLVDYEEDEWNEMIQGNLTAVF 123
Query: 497 LLTQEVLPYIRKRN-XXXXXXXXXXXXLAP-FKLLGAYSVSKTALLGLTKAVAQDLASEN 554
L + V+P +RK+N AP + A++ +K L+ LTK VA + A
Sbjct: 124 HLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEYG 183
Query: 555 IRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYIT 614
I N + PG + A +EA ++ N P+GR +++ ++FLC DD+ IT
Sbjct: 184 ITANMVCPGDIIGEMKEAT--IQEARQLKEHNTPIGRSGTGEDIARTISFLCEDDSDMIT 241
Query: 615 GEVIVAAG 622
G +I G
Sbjct: 242 GTIIEVTG 249
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 97/189 (51%), Gaps = 15/189 (7%)
Query: 15 AVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAKK 74
A++TA + G+G + ++L A+G SV ++ ++ + ++ K+ +++ V V KK
Sbjct: 10 ALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKK 69
Query: 75 EDRQKLFEHAEKKFGGIDILVSNAAVNPATGP-------VVECPENVWDKIFEVNVKSTF 127
ED K+ E A FG ID L++NA GP +V+ E+ W+++ + N+ + F
Sbjct: 70 EDLHKIVEEAMSHFGKIDFLINNA------GPYVFERKKLVDYEEDEWNEMIQGNLTAVF 123
Query: 128 LLTQEVLPYIRKRN-XXXXXXXXXXXXLAP-FKLLGAYSVSKTALLGLTKAVAQDLASEN 185
L + V+P +RK+N AP + A++ +K L+ LTK VA + A
Sbjct: 124 HLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEYG 183
Query: 186 IRVNCLAPG 194
I N + PG
Sbjct: 184 ITANMVCPG 192
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 692 YGGIDILVSNAAVNP---ANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKK 744
+G ID L++NA P + LV+ E W+++ NL + F L + V+P MRK+
Sbjct: 83 FGKIDFLINNAG--PYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQ 136
>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|B Chain B, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|C Chain C, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|D Chain D, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|E Chain E, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|F Chain F, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|G Chain G, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|H Chain H, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
Length = 256
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 122/257 (47%), Gaps = 20/257 (7%)
Query: 382 KVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 441
KVA+VT + GIG AIA RL +G +V I+ ++ + + G ++ V V+
Sbjct: 3 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVA-VKVDVS 61
Query: 442 KKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 501
++ E A K GG D++V+NA V P+T P+ + DK++ +NVK Q
Sbjct: 62 DRDQVFAAVEQARKTLGGFDVIVNNAGVAPST-PIESITPEIVDKVYNINVKGVIWGIQA 120
Query: 502 VLPYIRKR-NXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCL 560
+ +K + L YS SK A+ GLT+ A+DLA I VN
Sbjct: 121 AVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGY 180
Query: 561 APGITKTKFAAAL-------------YETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCS 607
PGI KT A + Y T E + + +GRL+ P+++ V++L S
Sbjct: 181 CPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAK----RITLGRLSEPEDVAACVSYLAS 236
Query: 608 DDASYITGEVIVAAGGM 624
D+ Y+TG+ ++ GGM
Sbjct: 237 PDSDYMTGQSLLIDGGM 253
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 87/184 (47%), Gaps = 3/184 (1%)
Query: 13 KVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 72
KVA+VT + GIG AIA RL +G +V I+ ++ + + G ++ V V+
Sbjct: 3 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVA-VKVDVS 61
Query: 73 KKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 132
++ E A K GG D++V+NA V P+T P+ + DK++ +NVK Q
Sbjct: 62 DRDQVFAAVEQARKTLGGFDVIVNNAGVAPST-PIESITPEIVDKVYNINVKGVIWGIQA 120
Query: 133 VLPYIRKR-NXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCL 191
+ +K + L YS SK A+ GLT+ A+DLA I VN
Sbjct: 121 AVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGY 180
Query: 192 APGI 195
PGI
Sbjct: 181 CPGI 184
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
YS SK A+ GLT+ A DLAP I VN PG+++T
Sbjct: 152 YSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKT 187
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 690 KLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKK 744
K GG D++V+NA V P+ P+ + + DK++++N+K Q + +K+
Sbjct: 75 KTLGGFDVIVNNAGVAPST-PIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKE 128
>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+
pdb|2ZTU|B Chain B, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+
pdb|2ZTU|C Chain C, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+
pdb|2ZTU|D Chain D, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+
Length = 260
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 123/260 (47%), Gaps = 12/260 (4%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKE-SNVNKAVETLQKEGHQKISGVV 437
L GKVAVVT S+ GIG IA L+ +GA +V++ + + + K L + K+
Sbjct: 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 438 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 497
++K E + L ++A ++ G IDILV+NA + T + + P WD I +N+ + F
Sbjct: 62 ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQH-TALIEDFPTEKWDAILALNLSAVFH 120
Query: 498 LTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 557
T LP+++K+ L AY +K ++G TK A + A + I
Sbjct: 121 GTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITA 180
Query: 558 NCLAPGITKT----KFAAALYETE------EAHEIAVSNVPMGRLAVPDEMGGIVAFLCS 607
N + PG + K +AL E A E+ P + P+++GG FL S
Sbjct: 181 NAICPGWVRAPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLAS 240
Query: 608 DDASYITGEVIVAAGGMQSR 627
D A+ ITG + GG +R
Sbjct: 241 DAAAQITGTTVSVDGGWTAR 260
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 93/186 (50%), Gaps = 2/186 (1%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKE-SNVNKAVETLQKEGHQKISGVV 68
L GKVAVVT S+ GIG IA L+A+GA +V++ + + + K L + K+
Sbjct: 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 69 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 128
++K E + L ++A ++ G IDILV+NA + T + + P WD I +N+ + F
Sbjct: 62 ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQH-TALIEDFPTEKWDAILALNLSAVFH 120
Query: 129 LTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 188
T LP+++K+ L AY +K ++G TK A + A + I
Sbjct: 121 GTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITA 180
Query: 189 NCLAPG 194
N + PG
Sbjct: 181 NAICPG 186
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 690 KLYGGIDILVSNAAVNPANEPLVECSEV-VWDKIFDVNLKSSFLLTQEVLPYMRKK 744
+ G IDILV+NA + + L+E WD I +NL + F T LP+M+K+
Sbjct: 79 RQMGRIDILVNNAGIQ--HTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ 132
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 640 AYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGDRMIAMLS 687
AY +K + G TKV A + A + I N + PG +R ++ I+ L+
Sbjct: 154 AYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRAPLVEKQISALA 201
>pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1
pdb|2Z1N|B Chain B, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1
Length = 260
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 124/256 (48%), Gaps = 14/256 (5%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQK--EGHQKISGV 436
+ GK+AVVTA S G+GFA A L+ GA +++ SR + A + G Q + V
Sbjct: 5 IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQ-VDIV 63
Query: 437 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 496
+ + D +LFE A + GG DILV + P G +E WD+ + + +S
Sbjct: 64 AGDIREPGDIDRLFEKA-RDLGGADILVYSTG-GPRPGRFMELGVEDWDESYRLLARSAV 121
Query: 497 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 556
+ + + ++ L P++ L ++ + ++G+ + +A +LA +
Sbjct: 122 WVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGVT 181
Query: 557 VNCLAPGITKTKFAAALYE---------TEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCS 607
VN + P + T +L E EEA + S +PMGR+ P+E+ +VAFL S
Sbjct: 182 VNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFLAS 241
Query: 608 DDASYITGEVIVAAGG 623
+ AS+ITG VI GG
Sbjct: 242 EKASFITGAVIPVDGG 257
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 88/188 (46%), Gaps = 5/188 (2%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQK--EGHQKISGV 67
+ GK+AVVTA S G+GFA A L+ GA +++ SR + A + G Q + V
Sbjct: 5 IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQ-VDIV 63
Query: 68 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 127
+ + D +LFE A + GG DILV + P G +E WD+ + + +S
Sbjct: 64 AGDIREPGDIDRLFEKA-RDLGGADILVYSTG-GPRPGRFMELGVEDWDESYRLLARSAV 121
Query: 128 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 187
+ + + ++ L P++ L ++ + ++G+ + +A +LA +
Sbjct: 122 WVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGVT 181
Query: 188 VNCLAPGI 195
VN + P +
Sbjct: 182 VNAVLPSL 189
>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181
pdb|3AWD|B Chain B, Crystal Structure Of Gox2181
pdb|3AWD|C Chain C, Crystal Structure Of Gox2181
pdb|3AWD|D Chain D, Crystal Structure Of Gox2181
Length = 260
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 115/243 (47%), Gaps = 3/243 (1%)
Query: 378 RLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVV 437
RL +VA+VT + IG A L+ GA V+I+ E+ KAVE L+ EGH +S VV
Sbjct: 10 RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGH-DVSSVV 68
Query: 438 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 497
V E Q ++ G +DILV+ A + + + + W K ++N+ F
Sbjct: 69 MDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFR 128
Query: 498 LTQEV--LPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 555
Q V + +K+ + + AY+ SK + +++A + A I
Sbjct: 129 SCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGI 188
Query: 556 RVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITG 615
R N +AP +T E E ++ ++ PMGR+ PDE+ +V FL SD AS +TG
Sbjct: 189 RANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLASDAASLMTG 248
Query: 616 EVI 618
++
Sbjct: 249 AIV 251
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 85/187 (45%), Gaps = 3/187 (1%)
Query: 9 RLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVV 68
RL +VA+VT + IG A L+ GA V+I+ E+ KAVE L+ EGH +S VV
Sbjct: 10 RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGH-DVSSVV 68
Query: 69 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 128
V E Q ++ G +DILV+ A + + + + W K ++N+ F
Sbjct: 69 MDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFR 128
Query: 129 LTQEV--LPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 186
Q V + +K+ + + AY+ SK + +++A + A I
Sbjct: 129 SCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGI 188
Query: 187 RVNCLAP 193
R N +AP
Sbjct: 189 RANAVAP 195
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Query: 617 VIVAAGGMQSRLTKSTVEFRFIGAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIR- 675
VIVA G M + + AY+ SK + + +A + AP IR N +AP I
Sbjct: 144 VIVAIGSMSGLIVNRPQQQ---AAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIET 200
Query: 676 --TKFG 679
T+FG
Sbjct: 201 TLTRFG 206
>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh
And 7-Oxo Glycochenodeoxycholic Acid
pdb|1AHI|B Chain B, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh
And 7-Oxo Glycochenodeoxycholic Acid
pdb|1AHH|A Chain A, 7 Alpha-hydroxysteroid Dehydrogenase Complexed With Nad+
pdb|1AHH|B Chain B, 7 Alpha-hydroxysteroid Dehydrogenase Complexed With Nad+
pdb|1FMC|A Chain A, 7-Alpha-Hydroxysteroid Dehydrogenase Complex With Nadh And
7-Oxo Glycochenodeoxycholic Acid
pdb|1FMC|B Chain B, 7-Alpha-Hydroxysteroid Dehydrogenase Complex With Nadh And
7-Oxo Glycochenodeoxycholic Acid
Length = 255
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 124/247 (50%), Gaps = 6/247 (2%)
Query: 378 RLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVV 437
RL GK A++T + GIG IA +T GASVV+S N V+ +Q+ G Q +
Sbjct: 8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFA-CR 66
Query: 438 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGP-VVECPENVWDKIFEVNVKSTF 496
C + +++ L + A K G +DILV+NA GP + P + + +E+NV S F
Sbjct: 67 CDITSEQELSALADFAISKLGKVDILVNNAG---GGGPKPFDMPMADFRRAYELNVFSFF 123
Query: 497 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 556
L+Q V P + K + +Y+ SK A L + +A DL +NIR
Sbjct: 124 HLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIR 183
Query: 557 VNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGE 616
VN +APG T ++ T E + + + P+ RL P ++ FLCS AS+++G+
Sbjct: 184 VNGIAPGAILTDALKSVI-TPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQ 242
Query: 617 VIVAAGG 623
++ +GG
Sbjct: 243 ILTVSGG 249
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 92/187 (49%), Gaps = 5/187 (2%)
Query: 9 RLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVV 68
RL GK A++T + GIG IA + GASVV+S N V+ +Q+ G Q +
Sbjct: 8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFA-CR 66
Query: 69 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGP-VVECPENVWDKIFEVNVKSTF 127
C + +++ L + A K G +DILV+NA GP + P + + +E+NV S F
Sbjct: 67 CDITSEQELSALADFAISKLGKVDILVNNAG---GGGPKPFDMPMADFRRAYELNVFSFF 123
Query: 128 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 187
L+Q V P + K + +Y+ SK A L + +A DL +NIR
Sbjct: 124 HLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIR 183
Query: 188 VNCLAPG 194
VN +APG
Sbjct: 184 VNGIAPG 190
Score = 29.6 bits (65), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 651 LTKVVAEDLAPENIRVNCLAPGLIRT 676
L + +A DL +NIRVN +APG I T
Sbjct: 169 LVRNMAFDLGEKNIRVNGIAPGAILT 194
>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|E Chain E, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|F Chain F, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|G Chain G, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
pdb|3TOX|I Chain I, Crystal Structure Of A Short Chain Dehydrogenase In
Complex With Nad(P) From Sinorhizobium Meliloti 1021
Length = 280
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 125/264 (47%), Gaps = 6/264 (2%)
Query: 377 SRLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGV 436
SRL GK+A+VT +S GIG A A + EGA VV+++R + + + + + + + +
Sbjct: 4 SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG-GGEAAAL 62
Query: 437 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 496
V + + L E A ++FGG+D +NA A G + W + + N+ S F
Sbjct: 63 AGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAF 122
Query: 497 LLTQEVLPYIRKRNXXXXX-XXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 555
L + +P I A F + Y+ SK L+GL +A+A +L + I
Sbjct: 123 LAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGI 182
Query: 556 RVNCLAPGITKT--KFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYI 613
RVN L PG T T FA E + R+A P+E+ +L SD AS++
Sbjct: 183 RVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLASDGASFV 242
Query: 614 TGEVIVAAGGMQSRLTKSTVEFRF 637
TG ++A GG + +TK+ F
Sbjct: 243 TGAALLADGG--ASVTKAAENLYF 264
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 2/188 (1%)
Query: 8 SRLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGV 67
SRL GK+A+VT +S GIG A A + EGA VV+++R + + + + + + + +
Sbjct: 4 SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG-GGEAAAL 62
Query: 68 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 127
V + + L E A ++FGG+D +NA A G + W + + N+ S F
Sbjct: 63 AGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAF 122
Query: 128 LLTQEVLPYIRKRNXXXXX-XXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 186
L + +P I A F + Y+ SK L+GL +A+A +L + I
Sbjct: 123 LAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGI 182
Query: 187 RVNCLAPG 194
RVN L PG
Sbjct: 183 RVNALLPG 190
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 618 IVAAGGMQSRLTKS----TVEFRFIGAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPG 672
I A GG T S T F + Y+ SK L GL + +A +L IRVN L PG
Sbjct: 132 IAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPG 190
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 692 YGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLP 739
+GG+D +NA A + S W + D NL S+FL + +P
Sbjct: 83 FGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVP 130
>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant
G37d) From Lactobacillus Brevis In Complex With
Phenylethanol And Nadh
pdb|1ZJZ|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant
G37d) From Lactobacillus Brevis In Complex With
Phenylethanol And Nad
pdb|1ZK0|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant
G37d) From Lactobacillus Brevis In Complex With
Phenylethanol And Nadh
pdb|1ZK1|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant
G37d) From Lactobacillus Brevis In Complex With
Phenylethanol And Nad
pdb|1ZK2|A Chain A, Orthorhombic Crystal Structure Of The Apo-Form Of
R-Specific Alcohol Dehydrogenase (Mutant G37d) From
Lactobacillus Brevis
pdb|1ZK3|A Chain A, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|B Chain B, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|C Chain C, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|D Chain D, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|E Chain E, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|F Chain F, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|G Chain G, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
pdb|1ZK3|H Chain H, Triclinic Crystal Structure Of The Apo-Form Of R-Specific
Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus
Brevis
Length = 251
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 126/260 (48%), Gaps = 17/260 (6%)
Query: 376 ASRLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISG 435
++RL GKVA++T + GIG AIA + EGA V+I+ R KA +++ +
Sbjct: 1 SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITDRHSDVGEKAAKSVGTPDQIQF-- 58
Query: 436 VVCHVAKKEDR-QKLFEHAEKKFGGIDILVSNA--AVNPATGPVVECPENVWDKIFEVNV 492
H + ED KLF+ EK FG + LV+NA AVN + V E W K+ VN+
Sbjct: 59 -FQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKS---VEETTTAEWRKLLAVNL 114
Query: 493 KSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPF---KLLGAYSVSKTALLGLTKAVAQD 549
F T+ L R +N + F LGAY+ SK A+ ++K+ A D
Sbjct: 115 DGVFFGTR--LGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALD 172
Query: 550 --LASENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCS 607
L ++RVN + PG KT L EEA + PMG + P+++ I +L S
Sbjct: 173 CALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMS-QRTKTPMGHIGEPNDIAYICVYLAS 231
Query: 608 DDASYITGEVIVAAGGMQSR 627
+++ + TG V GG ++
Sbjct: 232 NESKFATGSEFVVDGGYTAQ 251
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 96/196 (48%), Gaps = 16/196 (8%)
Query: 7 ASRLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISG 66
++RL GKVA++T + GIG AIA + EGA V+I+ R KA +++ +
Sbjct: 1 SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITDRHSDVGEKAAKSVGTPDQIQF-- 58
Query: 67 VVCHVAKKEDR-QKLFEHAEKKFGGIDILVSNA--AVNPATGPVVECPENVWDKIFEVNV 123
H + ED KLF+ EK FG + LV+NA AVN + V E W K+ VN+
Sbjct: 59 -FQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKS---VEETTTAEWRKLLAVNL 114
Query: 124 KSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPF---KLLGAYSVSKTALLGLTKAVAQD 180
F T+ L R +N + F LGAY+ SK A+ ++K+ A D
Sbjct: 115 DGVFFGTR--LGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALD 172
Query: 181 --LASENIRVNCLAPG 194
L ++RVN + PG
Sbjct: 173 CALKDYDVRVNTVHPG 188
Score = 33.1 bits (74), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 687 STDKLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKK 744
+T+K +G + LV+NA + N+ + E + W K+ VNL F T+ + M+ K
Sbjct: 75 ATEKAFGPVSTLVNNAGI-AVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNK 131
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 638 IGAYSVSKTALFGLTKVVAEDLAPEN--IRVNCLAPGLIRTKFGDRM 682
+GAY+ SK A+ ++K A D A ++ +RVN + PG I+T D +
Sbjct: 152 LGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL 198
>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of
Caenorhabditis Elegans In The Apo-Form
Length = 278
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 123/260 (47%), Gaps = 13/260 (5%)
Query: 377 SRLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEG--HQKIS 434
+R A KVA++T SS+GIG A A + EGA V I+ R + + + + G Q ++
Sbjct: 2 TRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVN 61
Query: 435 GVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNA-AVNPATGPVVECPENV--WDKIFEVN 491
VV V + ++ KFG +DILV+NA A P + +++ +D +N
Sbjct: 62 SVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLN 121
Query: 492 VKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLA 551
++S LT++ +P++ L YS++K A+ T+ A DL
Sbjct: 122 LRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLI 181
Query: 552 SENIRVNCLAPGITKTKFAAALYETEEAHEIAVSN-------VPMGRLAVPDEMGGIVAF 604
IRVN ++PG+ T F +A+ EE + S VP G + P ++ ++AF
Sbjct: 182 QHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAF 241
Query: 605 LCS-DDASYITGEVIVAAGG 623
L +SYI G +V GG
Sbjct: 242 LADRKTSSYIIGHQLVVDGG 261
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 92/193 (47%), Gaps = 5/193 (2%)
Query: 8 SRLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEG--HQKIS 65
+R KVA++T SS+GIG A A + EGA V I+ R + + + + G Q ++
Sbjct: 2 TRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVN 61
Query: 66 GVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNA-AVNPATGPVVECPENV--WDKIFEVN 122
VV V + ++ KFG +DILV+NA A P + +++ +D +N
Sbjct: 62 SVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLN 121
Query: 123 VKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLA 182
++S LT++ +P++ L YS++K A+ T+ A DL
Sbjct: 122 LRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLI 181
Query: 183 SENIRVNCLAPGI 195
IRVN ++PG+
Sbjct: 182 QHGIRVNSISPGL 194
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGDRM 682
YS++K A+ T+ A DL IRVN ++PGL+ T FG M
Sbjct: 162 YSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAM 203
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 692 YGGIDILVSNA-AVNPANEPLVECSEVV--WDKIFDVNLKSSFLLTQEVLPYMRKKK 745
+G +DILV+NA A P ++ ++ + +D ++NL+S LT++ +P++ K
Sbjct: 84 FGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK 140
>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh)
(Apoenyzme) From Lactobacillus Brevis
pdb|1ZK4|A Chain A, Structure Of R-specific Alcohol Dehydrogenase (wildtype)
From Lactobacillus Brevis In Complex With Acetophenone
And Nadp
Length = 251
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 126/260 (48%), Gaps = 17/260 (6%)
Query: 376 ASRLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISG 435
++RL GKVA++T + GIG AIA + EGA V+I+ R KA +++ +
Sbjct: 1 SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQF-- 58
Query: 436 VVCHVAKKEDR-QKLFEHAEKKFGGIDILVSNA--AVNPATGPVVECPENVWDKIFEVNV 492
H + ED KLF+ EK FG + LV+NA AVN + V E W K+ VN+
Sbjct: 59 -FQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKS---VEETTTAEWRKLLAVNL 114
Query: 493 KSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPF---KLLGAYSVSKTALLGLTKAVAQD 549
F T+ L R +N + F LGAY+ SK A+ ++K+ A D
Sbjct: 115 DGVFFGTR--LGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALD 172
Query: 550 --LASENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCS 607
L ++RVN + PG KT L EEA + PMG + P+++ I +L S
Sbjct: 173 CALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMS-QRTKTPMGHIGEPNDIAYICVYLAS 231
Query: 608 DDASYITGEVIVAAGGMQSR 627
+++ + TG V GG ++
Sbjct: 232 NESKFATGSEFVVDGGYTAQ 251
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 96/196 (48%), Gaps = 16/196 (8%)
Query: 7 ASRLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISG 66
++RL GKVA++T + GIG AIA + EGA V+I+ R KA +++ +
Sbjct: 1 SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQF-- 58
Query: 67 VVCHVAKKEDR-QKLFEHAEKKFGGIDILVSNA--AVNPATGPVVECPENVWDKIFEVNV 123
H + ED KLF+ EK FG + LV+NA AVN + V E W K+ VN+
Sbjct: 59 -FQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKS---VEETTTAEWRKLLAVNL 114
Query: 124 KSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPF---KLLGAYSVSKTALLGLTKAVAQD 180
F T+ L R +N + F LGAY+ SK A+ ++K+ A D
Sbjct: 115 DGVFFGTR--LGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALD 172
Query: 181 --LASENIRVNCLAPG 194
L ++RVN + PG
Sbjct: 173 CALKDYDVRVNTVHPG 188
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 687 STDKLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKK 744
+T+K +G + LV+NA + N+ + E + W K+ VNL F T+ + M+ K
Sbjct: 75 ATEKAFGPVSTLVNNAGI-AVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNK 131
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 638 IGAYSVSKTALFGLTKVVAEDLAPEN--IRVNCLAPGLIRTKFGDRM 682
+GAY+ SK A+ ++K A D A ++ +RVN + PG I+T D +
Sbjct: 152 LGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL 198
>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reduc Brucella Melitensis
pdb|3N74|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reduc Brucella Melitensis
pdb|3N74|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reduc Brucella Melitensis
pdb|3N74|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reduc Brucella Melitensis
Length = 261
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 125/253 (49%), Gaps = 14/253 (5%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L GKVA++T + G G +AKR + GA VVI R ++ E + E V
Sbjct: 7 LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGA----ERVAGEIGDAALAVAA 62
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVN--PATGPVVECPENVWDKIFEVNVKSTF 496
++K+ D E A KFG +DILV+NA + P +VE PE +D+I VNV+ +
Sbjct: 63 DISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVE-PEE-FDRIVGVNVRGVY 120
Query: 497 LLTQEVLPYIR----KRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLAS 552
L+T +++P+ + K P L Y+ +K ++ +TKA+A +LA
Sbjct: 121 LMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAP 180
Query: 553 ENIRVNCLAPGITKTKFAAALY--ETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDA 610
IRV L P +T ++EE + ++PMGRL PD++ AFLCS A
Sbjct: 181 AKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQA 240
Query: 611 SYITGEVIVAAGG 623
S ITG + GG
Sbjct: 241 SMITGVALDVDGG 253
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 94/190 (49%), Gaps = 12/190 (6%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L GKVA++T + G G +AKR + GA VVI R ++ E + E V
Sbjct: 7 LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAG----AERVAGEIGDAALAVAA 62
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVN--PATGPVVECPENVWDKIFEVNVKSTF 127
++K+ D E A KFG +DILV+NA + P +VE PE +D+I VNV+ +
Sbjct: 63 DISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVE-PEE-FDRIVGVNVRGVY 120
Query: 128 LLTQEVLPYIR----KRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLAS 183
L+T +++P+ + K P L Y+ +K ++ +TKA+A +LA
Sbjct: 121 LMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAP 180
Query: 184 ENIRVNCLAP 193
IRV L P
Sbjct: 181 AKIRVVALNP 190
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 36/54 (66%), Gaps = 4/54 (7%)
Query: 692 YGGIDILVSNAAVN--PANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRK 743
+G +DILV+NA + P N LVE E +D+I VN++ +L+T +++P+ ++
Sbjct: 81 FGKVDILVNNAGIGHKPQNAELVEPEE--FDRIVGVNVRGVYLMTSKLIPHFKE 132
>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog
(Target Efi- 506402 From Salmonella Enterica, Unliganded
Structure
pdb|4G81|A Chain A, Crystal Structure Of A Hexonate Dehydrogenase Ortholog
(Target Efi- 506402 From Salmonella Enterica, Unliganded
Structure
pdb|4G81|B Chain B, Crystal Structure Of A Hexonate Dehydrogenase Ortholog
(Target Efi- 506402 From Salmonella Enterica, Unliganded
Structure
pdb|4G81|C Chain C, Crystal Structure Of A Hexonate Dehydrogenase Ortholog
(Target Efi- 506402 From Salmonella Enterica, Unliganded
Structure
Length = 255
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 121/246 (49%), Gaps = 3/246 (1%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L GK A+VT S+ G+GFA A+ L+ GA V+++ + + + ++V+TL ++G+ GV
Sbjct: 7 LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDA-HGVAF 65
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
V + + F + + +DIL++NA + P+VE W K+ + N+ S FL+
Sbjct: 66 DVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRK-PMVELELENWQKVIDTNLTSAFLV 124
Query: 499 TQEVLPYIRKRNXXXXXXXX-XXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 557
++ + RN A + Y+ +K + LT ++A + A NI+
Sbjct: 125 SRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQT 184
Query: 558 NCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEV 617
N + PG T AL E ++ S+ P R P+E+ G FL S + YI G++
Sbjct: 185 NAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKASDYINGQI 244
Query: 618 IVAAGG 623
I GG
Sbjct: 245 IYVDGG 250
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 96/186 (51%), Gaps = 3/186 (1%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
LTGK A+VT S+ G+GFA A+ L+A GA V+++ + + + ++V+TL ++G+ GV
Sbjct: 7 LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDA-HGVAF 65
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
V + + F + + +DIL++NA + P+VE W K+ + N+ S FL+
Sbjct: 66 DVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRK-PMVELELENWQKVIDTNLTSAFLV 124
Query: 130 TQEVLPYIRKRNX-XXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 188
++ + RN A + Y+ +K + LT ++A + A NI+
Sbjct: 125 SRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQT 184
Query: 189 NCLAPG 194
N + PG
Sbjct: 185 NAIGPG 190
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 695 IDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYM 741
+DIL++NA + +P+VE W K+ D NL S+FL+++ M
Sbjct: 87 VDILINNAGIQY-RKPMVELELENWQKVIDTNLTSAFLVSRSAAKRM 132
Score = 29.3 bits (64), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 614 TGEVIVAAGGMQSRLTKSTVEFRFIGAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGL 673
+G I+ G + S+ + TV Y+ +K + LT +A + A NI+ N + PG
Sbjct: 137 SGGKIINIGSLTSQAARPTV-----APYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGY 191
Query: 674 IRTKFGDRMI 683
I T +I
Sbjct: 192 ILTDMNTALI 201
>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NUG|B Chain B, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NUG|C Chain C, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NUG|D Chain D, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3RWB|A Chain A, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
pdb|3RWB|B Chain B, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
pdb|3RWB|C Chain C, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
pdb|3RWB|D Chain D, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
Length = 247
Score = 104 bits (260), Expect = 2e-22, Method: Composition-based stats.
Identities = 74/248 (29%), Positives = 121/248 (48%), Gaps = 7/248 (2%)
Query: 378 RLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVV 437
RLAGK A+VT ++ GIG AIA RL+ +GA+V++S A ++ K K +
Sbjct: 3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGK----KARAIA 58
Query: 438 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 497
++ + LF + GGIDILV+NA++ P + + W KI +VN+ TF+
Sbjct: 59 ADISDPGSVKALFAEIQALTGGIDILVNNASIVPFVA-WDDVDLDHWRKIIDVNLTGTFI 117
Query: 498 LTQEVLPYIRKRNXXXXXXXXXXXX-LAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 556
+T+ +R A + AY +K ++G T+A+A +L NI
Sbjct: 118 VTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNIT 177
Query: 557 VNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGE 616
N + PG+ ++ A E + + G+ P+ + +V+FL SDDA +ITG+
Sbjct: 178 ANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKGK-GQPEHIADVVSFLASDDARWITGQ 236
Query: 617 VIVAAGGM 624
+ GM
Sbjct: 237 TLNVDAGM 244
Score = 84.0 bits (206), Expect = 3e-16, Method: Composition-based stats.
Identities = 58/188 (30%), Positives = 93/188 (49%), Gaps = 6/188 (3%)
Query: 9 RLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVV 68
RL GK A+VT ++ GIG AIA RL+A+GA+V++S A ++ K K +
Sbjct: 3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGK----KARAIA 58
Query: 69 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 128
++ + LF + GGIDILV+NA++ P + + W KI +VN+ TF+
Sbjct: 59 ADISDPGSVKALFAEIQALTGGIDILVNNASIVPFVA-WDDVDLDHWRKIIDVNLTGTFI 117
Query: 129 LTQEVLPYIRKRNXXXXXXXXXXXX-LAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 187
+T+ +R A + AY +K ++G T+A+A +L NI
Sbjct: 118 VTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNIT 177
Query: 188 VNCLAPGI 195
N + PG+
Sbjct: 178 ANAVTPGL 185
Score = 38.1 bits (87), Expect = 0.018, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 14/75 (18%)
Query: 671 PGLIRTKFGDRMIAMLSTDKLYGGIDILVSNAAVNPANEPLVECSEV---VWDKIFDVNL 727
PG ++ F + L GGIDILV+NA++ P V +V W KI DVNL
Sbjct: 64 PGSVKALFAE-------IQALTGGIDILVNNASI----VPFVAWDDVDLDHWRKIIDVNL 112
Query: 728 KSSFLLTQEVLPYMR 742
+F++T+ MR
Sbjct: 113 TGTFIVTRAGTDQMR 127
Score = 32.7 bits (73), Expect = 0.76, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 638 IGAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
+ AY +K + G T+ +A +L NI N + PGLI +
Sbjct: 150 MAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIES 188
>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein
Reductase, Fabg, From Staphylococcus Aureus
pdb|3OSU|B Chain B, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein
Reductase, Fabg, From Staphylococcus Aureus
Length = 246
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 125/245 (51%), Gaps = 9/245 (3%)
Query: 382 KVAVVTASSDGIGFAIAKRLSTEGASVVIS-SRKESNVNKAVETLQKEGHQKISGVVCHV 440
K A+VT +S GIG +IA +L+ EG +V ++ + + VE ++ +G + + +V
Sbjct: 5 KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFA-IQANV 63
Query: 441 AKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQ 500
A ++ + + +FG +D+LV+NA + + E WD + + N+K F Q
Sbjct: 64 ADADEVKAXIKEVVSQFGSLDVLVNNAGITR-DNLLXRXKEQEWDDVIDTNLKGVFNCIQ 122
Query: 501 EVLPY-IRKRNXXXXXXXXXXXXLA-PFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 558
+ P +R+R+ + P + Y +K ++GLTK+ A++LAS I VN
Sbjct: 123 KATPQXLRQRSGAIINLSSVVGAVGNPGQ--ANYVATKAGVIGLTKSAARELASRGITVN 180
Query: 559 CLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVI 618
+APG + AL ++E E ++ +P+ R ++ VAFL SD A YITG+ I
Sbjct: 181 AVAPGFIVSDXTDAL--SDELKEQXLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTI 238
Query: 619 VAAGG 623
GG
Sbjct: 239 HVNGG 243
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 95/185 (51%), Gaps = 7/185 (3%)
Query: 13 KVAVVTASSDGIGFAIAKRLSAEGASVVIS-SRKESNVNKAVETLQKEGHQKISGVVCHV 71
K A+VT +S GIG +IA +L+ EG +V ++ + + VE ++ +G + + +V
Sbjct: 5 KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFA-IQANV 63
Query: 72 AKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQ 131
A ++ + + +FG +D+LV+NA + + E WD + + N+K F Q
Sbjct: 64 ADADEVKAXIKEVVSQFGSLDVLVNNAGITR-DNLLXRXKEQEWDDVIDTNLKGVFNCIQ 122
Query: 132 EVLPY-IRKRNXXXXXXXXXXXXLA-PFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
+ P +R+R+ + P + Y +K ++GLTK+ A++LAS I VN
Sbjct: 123 KATPQXLRQRSGAIINLSSVVGAVGNPGQ--ANYVATKAGVIGLTKSAARELASRGITVN 180
Query: 190 CLAPG 194
+APG
Sbjct: 181 AVAPG 185
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 692 YGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKKK 745
+G +D+LV+NA + N L E WD + D NLK F Q+ P +++
Sbjct: 80 FGSLDVLVNNAGITRDN-LLXRXKEQEWDDVIDTNLKGVFNCIQKATPQXLRQR 132
Score = 36.2 bits (82), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGDRM 682
Y +K + GLTK A +LA I VN +APG I + D +
Sbjct: 154 YVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDXTDAL 195
>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier
Protein Reductase From Streptomyces Coelicolor A3(2)
pdb|2NM0|B Chain B, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier
Protein Reductase From Streptomyces Coelicolor A3(2)
Length = 253
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 116/247 (46%), Gaps = 29/247 (11%)
Query: 385 VVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAKKE 444
+VT + GIG AIA+ + G V I+ R E + V C + E
Sbjct: 25 LVTGGNRGIGLAIARAFADAGDKVAITYR------------SGEPPEGFLAVKCDITDTE 72
Query: 445 DRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQEVLP 504
++ ++ E+ G +++L++NA V ++ E + + E N+ TF +
Sbjct: 73 QVEQAYKEIEETHGPVEVLIANAGVTKDQ-LLMRMSEEDFTSVVETNLTGTFRV------ 125
Query: 505 YIRKRNXXXXXXXXXXXXL--APFKLLGA-----YSVSKTALLGLTKAVAQDLASENIRV 557
+++ N L + LLG+ Y+ SK L+G +++A++L S NI
Sbjct: 126 -VKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGSRNITF 184
Query: 558 NCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEV 617
N +APG T L T+E VS VP+GR A P+E+ V FL SDDASYITG V
Sbjct: 185 NVVAPGFVDTDMTKVL--TDEQRANIVSQVPLGRYARPEEIAATVRFLASDDASYITGAV 242
Query: 618 IVAAGGM 624
I GG+
Sbjct: 243 IPVDGGL 249
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 82/186 (44%), Gaps = 27/186 (14%)
Query: 16 VVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAKKE 75
+VT + GIG AIA+ + G V I+ R E + V C + E
Sbjct: 25 LVTGGNRGIGLAIARAFADAGDKVAITYR------------SGEPPEGFLAVKCDITDTE 72
Query: 76 DRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQEVLP 135
++ ++ E+ G +++L++NA V ++ E + + E N+ TF +
Sbjct: 73 QVEQAYKEIEETHGPVEVLIANAGVTKDQ-LLMRMSEEDFTSVVETNLTGTFRV------ 125
Query: 136 YIRKRNXXXXXXXXXXXXL--APFKLLGA-----YSVSKTALLGLTKAVAQDLASENIRV 188
+++ N L + LLG+ Y+ SK L+G +++A++L S NI
Sbjct: 126 -VKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGSRNITF 184
Query: 189 NCLAPG 194
N +APG
Sbjct: 185 NVVAPG 190
>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
pdb|4IBO|B Chain B, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
pdb|4IBO|C Chain C, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
pdb|4IBO|D Chain D, Crystal Structure Of A Putative Gluconate Dehydrogenase
From Agrobacterium Tumefaciens (Target Efi-506446)
Length = 271
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 122/256 (47%), Gaps = 14/256 (5%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L G+ A+VT SS G+G A+A+ L+ GA ++I+ S V + V+ + GH V
Sbjct: 24 LGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDA-EAVAF 82
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
V + + + F +++ +DILV+NA + P++E W ++ + N+ S F++
Sbjct: 83 DVTSESEIIEAFARLDEQGIDVDILVNNAGIQFRK-PMIELETADWQRVIDTNLTSAFMI 141
Query: 499 TQE----VLP--YIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLAS 552
+E ++P Y + N +AP Y+V+K + LT+A+A + A
Sbjct: 142 GREAAKRMIPRGYGKIVNIGSLTSELARATVAP------YTVAKGGIKMLTRAMAAEWAQ 195
Query: 553 ENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASY 612
I+ N + PG T AL + E + P R P E+ G FL + + Y
Sbjct: 196 YGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTAVFLSASASDY 255
Query: 613 ITGEVIVAAGGMQSRL 628
+ G++I GGM S L
Sbjct: 256 VNGQIIYVDGGMLSVL 271
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 95/191 (49%), Gaps = 14/191 (7%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L G+ A+VT SS G+G A+A+ L+ GA ++I+ S V + V+ + GH V
Sbjct: 24 LGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDA-EAVAF 82
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
V + + + F +++ +DILV+NA + P++E W ++ + N+ S F++
Sbjct: 83 DVTSESEIIEAFARLDEQGIDVDILVNNAGIQFRK-PMIELETADWQRVIDTNLTSAFMI 141
Query: 130 TQE----VLP--YIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLAS 183
+E ++P Y + N +AP Y+V+K + LT+A+A + A
Sbjct: 142 GREAAKRMIPRGYGKIVNIGSLTSELARATVAP------YTVAKGGIKMLTRAMAAEWAQ 195
Query: 184 ENIRVNCLAPG 194
I+ N + PG
Sbjct: 196 YGIQANAIGPG 206
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 695 IDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYM 741
+DILV+NA + +P++E W ++ D NL S+F++ +E M
Sbjct: 104 VDILVNNAGIQ-FRKPMIELETADWQRVIDTNLTSAFMIGREAAKRM 149
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 618 IVAAGGMQSRLTKSTVEFRFIGAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTK 677
IV G + S L ++TV Y+V+K + LT+ +A + A I+ N + PG + T
Sbjct: 157 IVNIGSLTSELARATV-----APYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTD 211
Query: 678 FGDRMI 683
+I
Sbjct: 212 MNQALI 217
>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex
pdb|2B4Q|B Chain B, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex
Length = 276
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 122/253 (48%), Gaps = 10/253 (3%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
LAG++A+VT S GIG IA+ L GA V I +R L G +
Sbjct: 27 LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG--DCQAIPA 84
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVEC-PENVWDKIFEVNVKSTFL 497
++ + ++L + + +DILV+NA + G +E P + W+K+ ++NV S F
Sbjct: 85 DLSSEAGARRLAQALGELSARLDILVNNAGTS--WGAALESYPVSGWEKVMQLNVTSVFS 142
Query: 498 LTQEVLPYIRKR-NXXXXXXXXXXXXLAPFKLLG----AYSVSKTALLGLTKAVAQDLAS 552
Q++LP +R+ + +A +G AY SK AL L++ +A++L
Sbjct: 143 CIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVG 202
Query: 553 ENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASY 612
E+I VN +APG ++ + +A E +++PMGR P+EM + L +Y
Sbjct: 203 EHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRWGRPEEMAALAISLAGTAGAY 262
Query: 613 ITGEVIVAAGGMQ 625
+TG VI GG
Sbjct: 263 MTGNVIPIDGGFH 275
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 93/191 (48%), Gaps = 10/191 (5%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L G++A+VT S GIG IA+ L GA V I +R L G +
Sbjct: 27 LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG--DCQAIPA 84
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVEC-PENVWDKIFEVNVKSTFL 128
++ + ++L + + +DILV+NA + G +E P + W+K+ ++NV S F
Sbjct: 85 DLSSEAGARRLAQALGELSARLDILVNNAGTS--WGAALESYPVSGWEKVMQLNVTSVFS 142
Query: 129 LTQEVLPYIRKR-NXXXXXXXXXXXXLAPFKLLG----AYSVSKTALLGLTKAVAQDLAS 183
Q++LP +R+ + +A +G AY SK AL L++ +A++L
Sbjct: 143 CIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVG 202
Query: 184 ENIRVNCLAPG 194
E+I VN +APG
Sbjct: 203 EHINVNVIAPG 213
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
Query: 640 AYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGDRMIAMLSTD 689
AY SK AL L++++A++L E+I VN +APG +F RM ++ D
Sbjct: 181 AYGPSKAALHQLSRMLAKELVGEHINVNVIAPG----RFPSRMTRHIAND 226
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 667 NCLA-PGLIRTKFGDRMIAMLSTDKLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDV 725
+C A P + ++ G R +A + +L +DILV+NA + L W+K+ +
Sbjct: 78 DCQAIPADLSSEAGARRLAQ-ALGELSARLDILVNNAGTS-WGAALESYPVSGWEKVMQL 135
Query: 726 NLKSSFLLTQEVLPYMRKK 744
N+ S F Q++LP +R+
Sbjct: 136 NVTSVFSCIQQLLPLLRRS 154
>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From
Streptococcus Suis Type 2
pdb|3O03|A Chain A, Quaternary Complex Structure Of Gluconate 5-Dehydrogenase
From Streptococcus Suis Type 2
Length = 291
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 127/258 (49%), Gaps = 8/258 (3%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L GK+A+VT +S GIGFAIA + GA++V + + V++ + + G G VC
Sbjct: 32 LKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINA-HGYVC 90
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
V ++ Q + E + G IDILV+NA + P++E + ++ ++++ + F++
Sbjct: 91 DVTDEDGIQAMVAQIESEVGIIDILVNNAGIIRRV-PMIEMTAAQFRQVIDIDLNAPFIV 149
Query: 499 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 558
++ V+P + K+ + + AY+ +K L LTK +A + NI+ N
Sbjct: 150 SKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQCN 209
Query: 559 CLAPGITKTKFAAALYETEEA------HEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASY 612
+ PG T A L E ++ + ++ P R +++ G FL SD +++
Sbjct: 210 GIGPGYIATPQTAPLRELQKDGSRHPFDQFIIAKTPAARWGEAEDLMGPAVFLASDASNF 269
Query: 613 ITGEVIVAAGGMQSRLTK 630
+ G ++ GG+ + + K
Sbjct: 270 VNGHILYVDGGILAYIGK 287
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 95/185 (51%), Gaps = 2/185 (1%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L GK+A+VT +S GIGFAIA + GA++V + + V++ + + G G VC
Sbjct: 32 LKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINA-HGYVC 90
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
V ++ Q + E + G IDILV+NA + P++E + ++ ++++ + F++
Sbjct: 91 DVTDEDGIQAMVAQIESEVGIIDILVNNAGIIRRV-PMIEMTAAQFRQVIDIDLNAPFIV 149
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
++ V+P + K+ + + AY+ +K L LTK +A + NI+ N
Sbjct: 150 SKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQCN 209
Query: 190 CLAPG 194
+ PG
Sbjct: 210 GIGPG 214
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 682 MIAMLSTDKLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYM 741
M+A + ++ G IDILV+NA + P++E + + ++ D++L + F++++ V+P M
Sbjct: 101 MVAQIESE--VGIIDILVNNAGI-IRRVPMIEMTAAQFRQVIDIDLNAPFIVSKAVIPSM 157
Query: 742 RKK 744
KK
Sbjct: 158 IKK 160
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 624 MQSRLTKSTVEFRFIGAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
M S L + TV AY+ +K L LTK +A + NI+ N + PG I T
Sbjct: 171 MMSELGRETVS-----AYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIAT 218
>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein]
Reductase Ttha0415 From Thermus Thermophilus
pdb|2PH3|B Chain B, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein]
Reductase Ttha0415 From Thermus Thermophilus
Length = 245
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 118/242 (48%), Gaps = 4/242 (1%)
Query: 384 AVVTASSDGIGFAIAKRLSTEGASVVIS-SRKESNVNKAVETLQKEGHQKISGVVCHVAK 442
A++T +S GIG AIA RL+ +G ++ I + + E ++ G ++ + ++ +
Sbjct: 4 ALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLE 63
Query: 443 KEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQEV 502
E L A + GG+D LV+NA + T +V + W+ + E N+ + F T+E
Sbjct: 64 AEAATALVHQAAEVLGGLDTLVNNAGITRDT-LLVRMKDEDWEAVLEANLSAVFRTTREA 122
Query: 503 LPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCLAP 562
+ + K + Y SK L+G T+AVA++ A I VN +AP
Sbjct: 123 VKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAP 182
Query: 563 GITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVIVAAG 622
G +T+ L +E E + +P GR P+E+ VAFL S+ A YITG+ + G
Sbjct: 183 GFIETEMTERL--PQEVKEAYLKQIPAGRFGRPEEVAEAVAFLVSEKAGYITGQTLCVDG 240
Query: 623 GM 624
G+
Sbjct: 241 GL 242
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 2/181 (1%)
Query: 15 AVVTASSDGIGFAIAKRLSAEGASVVIS-SRKESNVNKAVETLQKEGHQKISGVVCHVAK 73
A++T +S GIG AIA RL+ +G ++ I + + E ++ G ++ + ++ +
Sbjct: 4 ALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLE 63
Query: 74 KEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQEV 133
E L A + GG+D LV+NA + T +V + W+ + E N+ + F T+E
Sbjct: 64 AEAATALVHQAAEVLGGLDTLVNNAGITRDT-LLVRMKDEDWEAVLEANLSAVFRTTREA 122
Query: 134 LPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCLAP 193
+ + K + Y SK L+G T+AVA++ A I VN +AP
Sbjct: 123 VKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAP 182
Query: 194 G 194
G
Sbjct: 183 G 183
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGDRM 682
Y SK L G T+ VA++ A I VN +APG I T+ +R+
Sbjct: 152 YVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERL 193
Score = 35.8 bits (81), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 690 KLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKKK 745
++ GG+D LV+NA + + LV + W+ + + NL + F T+E + M K +
Sbjct: 76 EVLGGLDTLVNNAGITR-DTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKAR 130
>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis
pdb|1UZL|B Chain B, Maba From Mycobacterium Tuberculosis
Length = 247
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 115/240 (47%), Gaps = 15/240 (6%)
Query: 385 VVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAKKE 444
+VT + GIG AIA+RL+ +G V ++ R + + GV C V +
Sbjct: 19 LVTGGNRGIGLAIAQRLAADGHKVAVTHRGSG------------APKGLFGVECDVTDSD 66
Query: 445 DRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQEVLP 504
+ F E+ G +++LVSNA ++ A ++ E ++K+ N+ F + Q
Sbjct: 67 AVDRAFTAVEEHQGPVEVLVSNAGLS-ADAFLMRMTEEKFEKVINANLTGAFRVAQRASR 125
Query: 505 YIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCLAPGI 564
+++ Y+ SK ++G+ +++A++L+ N+ N +APG
Sbjct: 126 SMQRNKFGRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGY 185
Query: 565 TKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVIVAAGGM 624
T AL E + A+ +P R+ P E+ G+V+FL S+DASYI+G VI GGM
Sbjct: 186 IDTDMTRAL--DERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGM 243
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 82/179 (45%), Gaps = 13/179 (7%)
Query: 16 VVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAKKE 75
+VT + GIG AIA+RL+A+G V ++ R + + GV C V +
Sbjct: 19 LVTGGNRGIGLAIAQRLAADGHKVAVTHRGSG------------APKGLFGVECDVTDSD 66
Query: 76 DRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQEVLP 135
+ F E+ G +++LVSNA ++ A ++ E ++K+ N+ F + Q
Sbjct: 67 AVDRAFTAVEEHQGPVEVLVSNAGLS-ADAFLMRMTEEKFEKVINANLTGAFRVAQRASR 125
Query: 136 YIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCLAPG 194
+++ Y+ SK ++G+ +++A++L+ N+ N +APG
Sbjct: 126 SMQRNKFGRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPG 184
>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein
Reductase From Brassica Napus Complexed With Nadp+
pdb|2CDH|G Chain G, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|H Chain H, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|I Chain I, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|J Chain J, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|K Chain K, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|L Chain L, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution
Length = 244
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 122/247 (49%), Gaps = 12/247 (4%)
Query: 383 VAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKE----GHQKISGVVC 438
V VVT +S GIG AIA L G V+++ + + KA E + K+ G Q I+
Sbjct: 3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSA---KAAEEVSKQIEAYGGQAIT-FGG 58
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
V+K+ D + + + A +G ID++V+NA + T ++ ++ WD++ ++N+ FL
Sbjct: 59 DVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDT-LLIRMKKSQWDEVIDLNLTGVFLC 117
Query: 499 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 558
TQ + K+ L Y+ +K ++G +K A++ AS NI VN
Sbjct: 118 TQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVN 177
Query: 559 CLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLC-SDDASYITGEV 617
+ PG + A L E E + +P+GR P+ + G+V FL S ASYITG+
Sbjct: 178 VVCPGFIASDMTAKLGEDMEKK--ILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQA 235
Query: 618 IVAAGGM 624
GG+
Sbjct: 236 FTIDGGI 242
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 92/185 (49%), Gaps = 9/185 (4%)
Query: 14 VAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKE----GHQKISGVVC 69
V VVT +S GIG AIA L G V+++ + + KA E + K+ G Q I+
Sbjct: 3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSA---KAAEEVSKQIEAYGGQAIT-FGG 58
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
V+K+ D + + + A +G ID++V+NA + T ++ ++ WD++ ++N+ FL
Sbjct: 59 DVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDT-LLIRMKKSQWDEVIDLNLTGVFLC 117
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
TQ + K+ L Y+ +K ++G +K A++ AS NI VN
Sbjct: 118 TQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVN 177
Query: 190 CLAPG 194
+ PG
Sbjct: 178 VVCPG 182
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 684 AMLSTD-KLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMR 742
AM+ T +G ID++V+NA + + L+ + WD++ D+NL FL TQ M
Sbjct: 68 AMMKTAIDAWGTIDVVVNNAGITR-DTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMM 126
Query: 743 KKK 745
KK+
Sbjct: 127 KKR 129
>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l
pdb|2NTN|B Chain B, Crystal Structure Of Maba-c60v/g139a/s144l
Length = 267
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 115/240 (47%), Gaps = 15/240 (6%)
Query: 385 VVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAKKE 444
+VT + GIG AIA+RL+ +G V ++ R + + GV V +
Sbjct: 39 LVTGGNRGIGLAIAQRLAADGHKVAVTHRGSG------------APKGLFGVEVDVTDSD 86
Query: 445 DRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQEVLP 504
+ F E+ G +++LVSNA ++ A ++ E ++K+ N+ F + Q
Sbjct: 87 AVDRAFTAVEEHQGPVEVLVSNAGLS-ADAFLMRMTEEKFEKVINANLTGAFRVAQRASR 145
Query: 505 YIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCLAPGI 564
+++ L Y+ SK ++G+ +++A++L+ N+ N +APG
Sbjct: 146 SMQRNKFGRMIFIASVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGY 205
Query: 565 TKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVIVAAGGM 624
T AL E + A+ +P R+ P E+ G+V+FL S+DASYI+G VI GGM
Sbjct: 206 IDTDMTRAL--DERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGM 263
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 82/179 (45%), Gaps = 13/179 (7%)
Query: 16 VVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAKKE 75
+VT + GIG AIA+RL+A+G V ++ R + + GV V +
Sbjct: 39 LVTGGNRGIGLAIAQRLAADGHKVAVTHRGSG------------APKGLFGVEVDVTDSD 86
Query: 76 DRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQEVLP 135
+ F E+ G +++LVSNA ++ A ++ E ++K+ N+ F + Q
Sbjct: 87 AVDRAFTAVEEHQGPVEVLVSNAGLS-ADAFLMRMTEEKFEKVINANLTGAFRVAQRASR 145
Query: 136 YIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCLAPG 194
+++ L Y+ SK ++G+ +++A++L+ N+ N +APG
Sbjct: 146 SMQRNKFGRMIFIASVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPG 204
>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis
pdb|1UZM|B Chain B, Maba From Mycobacterium Tuberculosis
pdb|1UZN|A Chain A, Maba From Mycobacterium Tuberculosis
pdb|1UZN|B Chain B, Maba From Mycobacterium Tuberculosis
Length = 247
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 115/240 (47%), Gaps = 15/240 (6%)
Query: 385 VVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAKKE 444
+VT + GIG AIA+RL+ +G V ++ R + + GV V +
Sbjct: 19 LVTGGNRGIGLAIAQRLAADGHKVAVTHRGSG------------APKGLFGVEVDVTDSD 66
Query: 445 DRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQEVLP 504
+ F E+ G +++LVSNA ++ A ++ E ++K+ N+ F + Q
Sbjct: 67 AVDRAFTAVEEHQGPVEVLVSNAGLS-ADAFLMRMTEEKFEKVINANLTGAFRVAQRASR 125
Query: 505 YIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCLAPGI 564
+++ L Y+ SK ++G+ +++A++L+ N+ N +APG
Sbjct: 126 SMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGY 185
Query: 565 TKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVIVAAGGM 624
T AL E + A+ +P R+ P E+ G+V+FL S+DASYI+G VI GGM
Sbjct: 186 IDTDMTRAL--DERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGM 243
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 82/179 (45%), Gaps = 13/179 (7%)
Query: 16 VVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAKKE 75
+VT + GIG AIA+RL+A+G V ++ R + + GV V +
Sbjct: 19 LVTGGNRGIGLAIAQRLAADGHKVAVTHRGSG------------APKGLFGVEVDVTDSD 66
Query: 76 DRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQEVLP 135
+ F E+ G +++LVSNA ++ A ++ E ++K+ N+ F + Q
Sbjct: 67 AVDRAFTAVEEHQGPVEVLVSNAGLS-ADAFLMRMTEEKFEKVINANLTGAFRVAQRASR 125
Query: 136 YIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCLAPG 194
+++ L Y+ SK ++G+ +++A++L+ N+ N +APG
Sbjct: 126 SMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPG 184
>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF
Unknown Function From Caenorhabditis Elegans With
Cofactor
pdb|1XKQ|B Chain B, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF
Unknown Function From Caenorhabditis Elegans With
Cofactor
pdb|1XKQ|C Chain C, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF
Unknown Function From Caenorhabditis Elegans With
Cofactor
pdb|1XKQ|D Chain D, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF
Unknown Function From Caenorhabditis Elegans With
Cofactor
Length = 280
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 134/261 (51%), Gaps = 17/261 (6%)
Query: 378 RLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEG--HQKISG 435
R + K ++T SS+GIG A + EGA+V I+ R + + + + K G ++++
Sbjct: 3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNS 62
Query: 436 VVCHVAKKEDRQKLFEHAEKKFGGIDILVSNA--AVNPATGPV-VECPENVWDKIFEVNV 492
VV V ++ + ++ K+FG ID+LV+NA A+ A G + +++ K ++N+
Sbjct: 63 VVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNL 122
Query: 493 KSTFLLTQEVLPYI--RKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDL 550
++ +T++V P++ K P L Y+++K AL T++ A DL
Sbjct: 123 QAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLY--YAIAKAALDQYTRSTAIDL 180
Query: 551 ASENIRVNCLAPGITKTKFAAALYETEEA----HEIAVSN---VPMGRLAVPDEMGGIVA 603
A IRVN ++PG+ +T F A+ ++A + S+ +P+G P+ + I+
Sbjct: 181 AKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIIL 240
Query: 604 FLCSDDAS-YITGEVIVAAGG 623
FL + S YI G+ IVA GG
Sbjct: 241 FLADRNLSFYILGQSIVADGG 261
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 101/194 (52%), Gaps = 9/194 (4%)
Query: 9 RLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEG--HQKISG 66
R + K ++T SS+GIG A + EGA+V I+ R + + + + K G ++++
Sbjct: 3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNS 62
Query: 67 VVCHVAKKEDRQKLFEHAEKKFGGIDILVSN--AAVNPATGPV-VECPENVWDKIFEVNV 123
VV V ++ + ++ K+FG ID+LV+N AA+ A G + +++ K ++N+
Sbjct: 63 VVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNL 122
Query: 124 KSTFLLTQEVLPYI--RKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDL 181
++ +T++V P++ K P L Y+++K AL T++ A DL
Sbjct: 123 QAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLY--YAIAKAALDQYTRSTAIDL 180
Query: 182 ASENIRVNCLAPGI 195
A IRVN ++PG+
Sbjct: 181 AKFGIRVNSVSPGM 194
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGDRM 682
Y+++K AL T+ A DLA IRVN ++PG++ T F + M
Sbjct: 162 YAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAM 203
>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (aldt) In Ligand-free Form
pdb|2DTD|B Chain B, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (aldt) In Ligand-free Form
pdb|2DTE|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (Aldt) In Complex With Nadh
pdb|2DTE|B Chain B, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (Aldt) In Complex With Nadh
pdb|2DTX|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (Aldt) In Complex With D-Mannose
pdb|2DTX|B Chain B, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (Aldt) In Complex With D-Mannose
Length = 264
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 121/274 (44%), Gaps = 35/274 (12%)
Query: 377 SRLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGV 436
S L KV +VT +S GIG AIA+R EG+ V+ S + G K +
Sbjct: 4 SDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLS------------IHDPGEAKYDHI 51
Query: 437 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 496
C V + + +H K++G I +LV+NA + + G + W +I +VN+ +
Sbjct: 52 ECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIE-SYGKIESMSMGEWRRIIDVNLFGYY 110
Query: 497 LLTQEVLPY-IRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 555
++ +PY IR R+ + K AY SK A++GLTK++A D A +
Sbjct: 111 YASKFAIPYMIRSRDPSIVNISSVQASIIT-KNASAYVTSKHAVIGLTKSIALDYAPL-L 168
Query: 556 RVNCLAPGITKTKFAAALYE--------------TEEAHEIAVSNVPMGRLAVPDEMGGI 601
R N + P T E +E HE PM R+ P E+
Sbjct: 169 RCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHE-----HPMQRIGKPQEVASA 223
Query: 602 VAFLCSDDASYITGEVIVAAGGMQSRLTKSTVEF 635
VAFL S +AS+ITG + GG+ R ST E
Sbjct: 224 VAFLASREASFITGTCLYVDGGLSIRAPISTPEL 257
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 88/187 (47%), Gaps = 16/187 (8%)
Query: 8 SRLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGV 67
S L KV +VT +S GIG AIA+R EG+ V+ S + G K +
Sbjct: 4 SDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLS------------IHDPGEAKYDHI 51
Query: 68 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 127
C V + + +H K++G I +LV+NA + + G + W +I +VN+ +
Sbjct: 52 ECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIE-SYGKIESMSMGEWRRIIDVNLFGYY 110
Query: 128 LLTQEVLPY-IRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 186
++ +PY IR R+ + K AY SK A++GLTK++A D A +
Sbjct: 111 YASKFAIPYMIRSRDPSIVNISSVQASIIT-KNASAYVTSKHAVIGLTKSIALDYAPL-L 168
Query: 187 RVNCLAP 193
R N + P
Sbjct: 169 RCNAVCP 175
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 690 KLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKKK 745
K YG I +LV+NA + + + S W +I DVNL + ++ +PYM + +
Sbjct: 70 KEYGSISVLVNNAGIESYGK-IESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSR 124
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 640 AYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
AY SK A+ GLTK +A D AP +R N + P I T
Sbjct: 145 AYVTSKHAVIGLTKSIALDYAPL-LRCNAVCPATIDT 180
>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|B Chain B, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|C Chain C, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|D Chain D, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|E Chain E, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|F Chain F, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|G Chain G, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|H Chain H, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|3VDR|A Chain A, Crystal Structure Of D-3-Hydroxybutyrate Dehydrogenase,
Prepared In The Presence Of The Substrate
D-3-Hydroxybutyrate And Nad(+)
pdb|3VDR|B Chain B, Crystal Structure Of D-3-Hydroxybutyrate Dehydrogenase,
Prepared In The Presence Of The Substrate
D-3-Hydroxybutyrate And Nad(+)
pdb|3VDR|C Chain C, Crystal Structure Of D-3-Hydroxybutyrate Dehydrogenase,
Prepared In The Presence Of The Substrate
D-3-Hydroxybutyrate And Nad(+)
pdb|3VDR|D Chain D, Crystal Structure Of D-3-Hydroxybutyrate Dehydrogenase,
Prepared In The Presence Of The Substrate
D-3-Hydroxybutyrate And Nad(+)
pdb|3VDQ|A Chain A, Crystal Structure Of Alcaligenes Faecalis
D-3-Hydroxybutyrate Dehydrogenase In Complex With Nad(+)
And Acetate
pdb|3VDQ|B Chain B, Crystal Structure Of Alcaligenes Faecalis
D-3-Hydroxybutyrate Dehydrogenase In Complex With Nad(+)
And Acetate
pdb|3VDQ|C Chain C, Crystal Structure Of Alcaligenes Faecalis
D-3-Hydroxybutyrate Dehydrogenase In Complex With Nad(+)
And Acetate
pdb|3VDQ|D Chain D, Crystal Structure Of Alcaligenes Faecalis
D-3-Hydroxybutyrate Dehydrogenase In Complex With Nad(+)
And Acetate
Length = 260
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 117/260 (45%), Gaps = 12/260 (4%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKE-SNVNKAVETLQKEGHQKISGVV 437
L GK AVVT S+ GIG A+A L+ GA VVI+ + ++ + TL+ + K +
Sbjct: 2 LKGKKAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGVKAYYLN 61
Query: 438 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 497
++ + + A + GG+DILV+NA + T P+ E P + W+ I +N+ + F
Sbjct: 62 ADLSDAQATRDFIAKAAEALGGLDILVNNAGIQH-TAPIEEFPVDKWNAIIALNLSAVFH 120
Query: 498 LTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 557
T LP ++K+ L AY +K ++GLTK A + A + I
Sbjct: 121 GTAAALPIMQKQGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALENAGKGITC 180
Query: 558 NCLAPGITKTKFAAALYET----------EEAHEIAVSNVPMGRLAVPDEMGGIVAFLCS 607
N + PG +T E A E+ P + P+++GG FL S
Sbjct: 181 NAICPGWVRTPLVEKQIEAISQQKGIDIEAAARELLAEKQPSLQFVTPEQLGGAAVFLSS 240
Query: 608 DDASYITGEVIVAAGGMQSR 627
A +TG + GG +R
Sbjct: 241 AAADQMTGTTLSLDGGWTAR 260
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 91/186 (48%), Gaps = 2/186 (1%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKE-SNVNKAVETLQKEGHQKISGVV 68
L GK AVVT S+ GIG A+A L+ GA VVI+ + ++ + TL+ + K +
Sbjct: 2 LKGKKAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGVKAYYLN 61
Query: 69 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 128
++ + + A + GG+DILV+NA + T P+ E P + W+ I +N+ + F
Sbjct: 62 ADLSDAQATRDFIAKAAEALGGLDILVNNAGIQH-TAPIEEFPVDKWNAIIALNLSAVFH 120
Query: 129 LTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 188
T LP ++K+ L AY +K ++GLTK A + A + I
Sbjct: 121 GTAAALPIMQKQGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALENAGKGITC 180
Query: 189 NCLAPG 194
N + PG
Sbjct: 181 NAICPG 186
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 11/80 (13%)
Query: 618 IVAAGGMQSRLTKSTVEFRFIGAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTK 677
I +A G+ + + KS AY +K + GLTKV A + A + I N + PG +RT
Sbjct: 140 IASAHGLVASVNKS--------AYVAAKHGVVGLTKVTALENAGKGITCNAICPGWVRTP 191
Query: 678 FGDRMIAMLSTDKLYGGIDI 697
++ I +S K GIDI
Sbjct: 192 LVEKQIEAISQQK---GIDI 208
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 693 GGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKK 744
GG+DILV+NA + P+ E W+ I +NL + F T LP M+K+
Sbjct: 82 GGLDILVNNAGIQH-TAPIEEFPVDKWNAIIALNLSAVFHGTAAALPIMQKQ 132
>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis At 1.87 A
Resolution
pdb|3ICC|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis At 1.87 A
Resolution
Length = 255
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 120/255 (47%), Gaps = 13/255 (5%)
Query: 377 SRLAGKVAVVTASSDGIGFAIAKRLSTEGASVVI--SSRKESNVNKAVETLQKEGHQKIS 434
S L GKVA+VT +S GIG AIAKRL+ +GA V I +RKE + V +Q G S
Sbjct: 3 SXLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEE-AEETVYEIQSNGGSAFS 61
Query: 435 GVVCHVAKKEDRQKLFEHAEKKFGG------IDILVSNAAVNPATGPVVECPENVWDKIF 488
+ ++ + L+ + + DIL++NA + P + E E +D+
Sbjct: 62 -IGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGA-FIEETTEQFFDRXV 119
Query: 489 EVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQ 548
VN K+ F + Q+ L +R + P + AYS +K A+ T +A+
Sbjct: 120 SVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFI--AYSXTKGAINTXTFTLAK 177
Query: 549 DLASENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSD 608
L + I VN + PG KT A L + A + RL +++ AFL S
Sbjct: 178 QLGARGITVNAILPGFVKTDXNAELLSDPXXKQYATTISAFNRLGEVEDIADTAAFLASP 237
Query: 609 DASYITGEVIVAAGG 623
D+ ++TG++I +GG
Sbjct: 238 DSRWVTGQLIDVSGG 252
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 92/196 (46%), Gaps = 13/196 (6%)
Query: 8 SRLTGKVAVVTASSDGIGFAIAKRLSAEGASVVI--SSRKESNVNKAVETLQKEGHQKIS 65
S L GKVA+VT +S GIG AIAKRL+ +GA V I +RKE + V +Q G S
Sbjct: 3 SXLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEE-AEETVYEIQSNGGSAFS 61
Query: 66 GVVCHVAKKEDRQKLFEHAEKKFGG------IDILVSNAAVNPATGPVVECPENVWDKIF 119
+ ++ + L+ + + DIL++NA + P + E E +D+
Sbjct: 62 -IGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGA-FIEETTEQFFDRXV 119
Query: 120 EVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQ 179
VN K+ F + Q+ L +R + P + AYS +K A+ T +A+
Sbjct: 120 SVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFI--AYSXTKGAINTXTFTLAK 177
Query: 180 DLASENIRVNCLAPGI 195
L + I VN + PG
Sbjct: 178 QLGARGITVNAILPGF 193
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 640 AYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
AYS +K A+ T +A+ L I VN + PG ++T
Sbjct: 160 AYSXTKGAINTXTFTLAKQLGARGITVNAILPGFVKT 196
>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
pdb|3GK3|B Chain B, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
pdb|3GK3|C Chain C, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
pdb|3GK3|D Chain D, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
Length = 269
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 118/251 (47%), Gaps = 4/251 (1%)
Query: 376 ASRLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISG 435
S A +VA VT G+G AI++RL G +V +S + ++ +++ +
Sbjct: 20 GSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKA 79
Query: 436 VVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKST 495
VA E ++ E FG +D+L++NA + ++ + WD + ++ +
Sbjct: 80 YAVDVADFESCERCAEKVLADFGKVDVLINNAGITR-DATFMKMTKGDWDAVMRTDLDAM 138
Query: 496 FLLTQEVLP-YIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASEN 554
F +T++ + + +R F Y+ +K + G TK +A + A
Sbjct: 139 FNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQAN-YASAKAGIHGFTKTLALETAKRG 197
Query: 555 IRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYIT 614
I VN ++PG T A+ + +I + +P+GRL PDE+ ++AFLCSDDA ++T
Sbjct: 198 ITVNTVSPGYLATAMVEAVPQDVLEAKI-LPQIPVGRLGRPDEVAALIAFLCSDDAGFVT 256
Query: 615 GEVIVAAGGMQ 625
G + GGM
Sbjct: 257 GADLAINGGMH 267
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 81/183 (44%), Gaps = 3/183 (1%)
Query: 13 KVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 72
+VA VT G+G AI++RL G +V +S + ++ +++ + VA
Sbjct: 26 RVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVA 85
Query: 73 KKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 132
E ++ E FG +D+L++NA + ++ + WD + ++ + F +T++
Sbjct: 86 DFESCERCAEKVLADFGKVDVLINNAGITR-DATFMKMTKGDWDAVMRTDLDAMFNVTKQ 144
Query: 133 VLP-YIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCL 191
+ + +R F Y+ +K + G TK +A + A I VN +
Sbjct: 145 FIAGMVERRFGRIVNIGSVNGSRGAFGQAN-YASAKAGIHGFTKTLALETAKRGITVNTV 203
Query: 192 APG 194
+PG
Sbjct: 204 SPG 206
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
Y+ +K + G TK +A + A I VN ++PG + T
Sbjct: 175 YASAKAGIHGFTKTLALETAKRGITVNTVSPGYLAT 210
>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase
From Mesorhizobium Loti
pdb|3NDR|B Chain B, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase
From Mesorhizobium Loti
pdb|3NDR|C Chain C, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase
From Mesorhizobium Loti
pdb|3NDR|D Chain D, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase
From Mesorhizobium Loti
Length = 247
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 116/242 (47%), Gaps = 7/242 (2%)
Query: 378 RLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVV 437
RLAGK A+VT ++ GIG AIA RL+ +GA+V++S A ++ K K +
Sbjct: 3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGK----KARAIA 58
Query: 438 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 497
++ + LF + GGIDILV+NA++ P + + W KI +VN+ TF+
Sbjct: 59 ADISDPGSVKALFAEIQALTGGIDILVNNASIVPFV-AWDDVDLDHWRKIIDVNLTGTFI 117
Query: 498 LTQEVLPYIRKRNXXXXXXXXXXXX-LAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 556
+T+ R A AY +K ++G T+A+A +L NI
Sbjct: 118 VTRAGTDQXRAAGKAGRVISIASNTFFAGTPNXAAYVAAKGGVIGFTRALATELGKYNIT 177
Query: 557 VNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGE 616
N + PG+ ++ A E + G+ P+ + +V+FL SDDA +ITG+
Sbjct: 178 ANAVTPGLIESDGVKASPHNEAFGFVEXLQAXKGK-GQPEHIADVVSFLASDDARWITGQ 236
Query: 617 VI 618
+
Sbjct: 237 TL 238
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 91/188 (48%), Gaps = 6/188 (3%)
Query: 9 RLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVV 68
RL GK A+VT ++ GIG AIA RL+A+GA+V++S A ++ K K +
Sbjct: 3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGK----KARAIA 58
Query: 69 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 128
++ + LF + GGIDILV+NA++ P + + W KI +VN+ TF+
Sbjct: 59 ADISDPGSVKALFAEIQALTGGIDILVNNASIVPFV-AWDDVDLDHWRKIIDVNLTGTFI 117
Query: 129 LTQEVLPYIRKRNXXXXXXXXXXXX-LAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 187
+T+ R A AY +K ++G T+A+A +L NI
Sbjct: 118 VTRAGTDQXRAAGKAGRVISIASNTFFAGTPNXAAYVAAKGGVIGFTRALATELGKYNIT 177
Query: 188 VNCLAPGI 195
N + PG+
Sbjct: 178 ANAVTPGL 185
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 7/48 (14%)
Query: 691 LYGGIDILVSNAAVNPANEPLVECSEVV---WDKIFDVNLKSSFLLTQ 735
L GGIDILV+NA++ P V +V W KI DVNL +F++T+
Sbjct: 77 LTGGIDILVNNASI----VPFVAWDDVDLDHWRKIIDVNLTGTFIVTR 120
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 640 AYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
AY +K + G T+ +A +L NI N + PGLI +
Sbjct: 152 AYVAAKGGVIGFTRALATELGKYNITANAVTPGLIES 188
>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8
pdb|2D1Y|B Chain B, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8
pdb|2D1Y|C Chain C, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8
pdb|2D1Y|D Chain D, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8
Length = 256
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 125/263 (47%), Gaps = 34/263 (12%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
AGK +VT + GIG AIA+ + EGA V + + KE + I G
Sbjct: 4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG---------KEVAEAIGGAFF 54
Query: 439 HVAKKEDRQKL--FEHAEKKFGGIDILVSNAAVN-PATGPVVECPENVWDKIFEVNVKST 495
V +++R+++ E A G +D+LV+NAA+ P + V PE W ++ EVN+ +
Sbjct: 55 QVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPE--WRRVLEVNLTAP 112
Query: 496 FLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 555
L+ +RK L + AY+ SK L+ LT+++A DLA I
Sbjct: 113 MHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRI 172
Query: 556 RVNCLAPGITKTKFAAALYETEEAHEIAVSNVP------------MGRLAVPDEMGGIVA 603
RVN +APG T+ A+ E IA+S P + RL P+E+ V
Sbjct: 173 RVNAVAPGAIATE---AVLEA-----IALSPDPERTRRDWEDLHALRRLGKPEEVAEAVL 224
Query: 604 FLCSDDASYITGEVIVAAGGMQS 626
FL S+ AS+ITG ++ GGM +
Sbjct: 225 FLASEKASFITGAILPVDGGMTA 247
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 90/188 (47%), Gaps = 14/188 (7%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
GK +VT + GIG AIA+ + EGA V + + KE + I G
Sbjct: 4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG---------KEVAEAIGGAFF 54
Query: 70 HVAKKEDRQKL--FEHAEKKFGGIDILVSNAAVN-PATGPVVECPENVWDKIFEVNVKST 126
V +++R+++ E A G +D+LV+NAA+ P + V PE W ++ EVN+ +
Sbjct: 55 QVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPE--WRRVLEVNLTAP 112
Query: 127 FLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 186
L+ +RK L + AY+ SK L+ LT+++A DLA I
Sbjct: 113 MHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRI 172
Query: 187 RVNCLAPG 194
RVN +APG
Sbjct: 173 RVNAVAPG 180
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 640 AYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTK 677
AY+ SK L LT+ +A DLAP IRVN +APG I T+
Sbjct: 148 AYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATE 185
>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3R1I|B Chain B, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
Length = 276
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 119/248 (47%), Gaps = 8/248 (3%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L+GK A++T +S GIG +A + GA V +++R + + + G + + + C
Sbjct: 30 LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALP-IRC 88
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
V + + + + + + GGIDI V NA + +++ P + +I + NV FL
Sbjct: 89 DVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQA-MLDMPLEEFQRIQDTNVTGVFLT 147
Query: 499 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKL---LGAYSVSKTALLGLTKAVAQDLASENI 555
Q + + + + Y SK A++ LTKA+A +LA I
Sbjct: 148 AQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQI 207
Query: 556 RVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITG 615
RVN ++PG +T+ L + H + +P+GR+ P+E+ G+ +L S +SY+TG
Sbjct: 208 RVNSVSPGYIRTELVEPL---ADYHALWEPKIPLGRMGRPEELTGLYLYLASAASSYMTG 264
Query: 616 EVIVAAGG 623
IV GG
Sbjct: 265 SDIVIDGG 272
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 87/188 (46%), Gaps = 5/188 (2%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L+GK A++T +S GIG +A + GA V +++R + + + G + + + C
Sbjct: 30 LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALP-IRC 88
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
V + + + + + + GGIDI V NA + +++ P + +I + NV FL
Sbjct: 89 DVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQA-MLDMPLEEFQRIQDTNVTGVFLT 147
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKL---LGAYSVSKTALLGLTKAVAQDLASENI 186
Q + + + + Y SK A++ LTKA+A +LA I
Sbjct: 148 AQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQI 207
Query: 187 RVNCLAPG 194
RVN ++PG
Sbjct: 208 RVNSVSPG 215
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
Y SK A+ LTK +A +LAP IRVN ++PG IRT+
Sbjct: 184 YCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTEL 221
>pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.1 A Resolution
pdb|4IIU|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.1 A Resolution
pdb|4IIU|C Chain C, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.1 A Resolution
pdb|4IIU|D Chain D, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.1 A Resolution
pdb|4IIV|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.5 A Resolution
pdb|4IIV|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.5 A Resolution
pdb|4IIV|C Chain C, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.5 A Resolution
pdb|4IIV|D Chain D, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.5 A Resolution
Length = 267
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 128/247 (51%), Gaps = 17/247 (6%)
Query: 385 VVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQ----KEGHQKISGVVCHV 440
+VT +S GIG AIA++L+ +G ++ + +++ A ETL G+ ++ + V
Sbjct: 30 LVTGASKGIGRAIARQLAADGFNIGVHYHRDAA--GAQETLNAIVANGGNGRL--LSFDV 85
Query: 441 AKKEDRQKLFEHAEKKFGGIDILVSNAAV-NPATGPVVECPENVWDKIFEVNVKSTFLLT 499
A +E +++ EH + G +VSNA + A P + + WD + N+ S + +
Sbjct: 86 ANREQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDD--WDAVIHTNLDSFYNVI 143
Query: 500 QE-VLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 558
Q ++P I R + + YS +K ++G TKA+A +LA I VN
Sbjct: 144 QPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAKAGIIGATKALAIELAKRKITVN 203
Query: 559 CLAPGITKTKFAAALYETEE-AHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEV 617
C+APG+ T + E EE A + A+S +PM R+ +E+ G+ ++L SD A Y+T +V
Sbjct: 204 CIAPGLIDT----GMIEMEESALKEAMSMIPMKRMGQAEEVAGLASYLMSDIAGYVTRQV 259
Query: 618 IVAAGGM 624
I GGM
Sbjct: 260 ISINGGM 266
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 94/186 (50%), Gaps = 12/186 (6%)
Query: 16 VVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQ----KEGHQKISGVVCHV 71
+VT +S GIG AIA++L+A+G ++ + +++ A ETL G+ ++ + V
Sbjct: 30 LVTGASKGIGRAIARQLAADGFNIGVHYHRDAA--GAQETLNAIVANGGNGRL--LSFDV 85
Query: 72 AKKEDRQKLFEHAEKKFGGIDILVSNAAV-NPATGPVVECPENVWDKIFEVNVKSTFLLT 130
A +E +++ EH + G +VSNA + A P + + WD + N+ S + +
Sbjct: 86 ANREQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDD--WDAVIHTNLDSFYNVI 143
Query: 131 QE-VLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
Q ++P I R + + YS +K ++G TKA+A +LA I VN
Sbjct: 144 QPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAKAGIIGATKALAIELAKRKITVN 203
Query: 190 CLAPGI 195
C+APG+
Sbjct: 204 CIAPGL 209
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
YS +K + G TK +A +LA I VNC+APGLI T
Sbjct: 177 YSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGM 214
>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma
Acidophilum Aldohexose Dehydrogenase (Aldt)
pdb|2ZK7|B Chain B, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma
Acidophilum Aldohexose Dehydrogenase (Aldt)
Length = 257
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 118/266 (44%), Gaps = 35/266 (13%)
Query: 377 SRLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGV 436
S L KV +VT +S GIG AIA+R EG+ V+ S + G K +
Sbjct: 11 SDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLS------------IHDPGEAKYDHI 58
Query: 437 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 496
C V + + +H K++G I +LV+NA + + G + W +I +VN+ +
Sbjct: 59 ECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIE-SYGKIESMSMGEWRRIIDVNLFGYY 117
Query: 497 LLTQEVLPY-IRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 555
++ +PY IR R+ + K AY SK A++GLTK++A D A +
Sbjct: 118 YASKFAIPYMIRSRDPSIVNISSVQASIIT-KNASAYVTSKHAVIGLTKSIALDYAPL-L 175
Query: 556 RVNCLAPGITKTKFAAALYE--------------TEEAHEIAVSNVPMGRLAVPDEMGGI 601
R N + P T E +E HE PM R+ P E+
Sbjct: 176 RCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHE-----HPMQRIGKPQEVASA 230
Query: 602 VAFLCSDDASYITGEVIVAAGGMQSR 627
VAFL S +AS+ITG + GG+ R
Sbjct: 231 VAFLASREASFITGTCLYVDGGLSIR 256
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 88/187 (47%), Gaps = 16/187 (8%)
Query: 8 SRLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGV 67
S L KV +VT +S GIG AIA+R EG+ V+ S + G K +
Sbjct: 11 SDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLS------------IHDPGEAKYDHI 58
Query: 68 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 127
C V + + +H K++G I +LV+NA + + G + W +I +VN+ +
Sbjct: 59 ECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIE-SYGKIESMSMGEWRRIIDVNLFGYY 117
Query: 128 LLTQEVLPY-IRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 186
++ +PY IR R+ + K AY SK A++GLTK++A D A +
Sbjct: 118 YASKFAIPYMIRSRDPSIVNISSVQASIIT-KNASAYVTSKHAVIGLTKSIALDYAPL-L 175
Query: 187 RVNCLAP 193
R N + P
Sbjct: 176 RCNAVCP 182
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 690 KLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKKK 745
K YG I +LV+NA + + + S W +I DVNL + ++ +PYM + +
Sbjct: 77 KEYGSISVLVNNAGIESYGK-IESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSR 131
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 640 AYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
AY SK A+ GLTK +A D AP +R N + P I T
Sbjct: 152 AYVTSKHAVIGLTKSIALDYAPL-LRCNAVCPATIDT 187
>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|B Chain B, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|C Chain C, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|D Chain D, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|E Chain E, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|F Chain F, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|G Chain G, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|H Chain H, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
Length = 256
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 125/242 (51%), Gaps = 6/242 (2%)
Query: 383 VAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAK 442
VA+VT ++ GIG AIA + GASVV++ K +++ G + I G+ C+V
Sbjct: 14 VAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAI-GLECNVTD 72
Query: 443 KEDRQKLFEHAEKKFGGIDILVSNAAVNPATGP-VVECPENVWDKIFEVNVKSTFLLTQE 501
++ R+ + + A +FG I +LV+NA GP + P + ++ F++N+ S F L+Q
Sbjct: 73 EQHREAVIKAALDQFGKITVLVNNAG---GGGPKPFDMPMSDFEWAFKLNLFSLFRLSQL 129
Query: 502 VLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCLA 561
P+++K + +Y SK A+ LT+ +A D+ IRVN +A
Sbjct: 130 AAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIA 189
Query: 562 PGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVIVAA 621
PG KT A A T E + + P+GRL ++ FLCS A++I+G+V+ +
Sbjct: 190 PGAIKTD-ALATVLTPEIERAMLKHTPLGRLGEAQDIANAALFLCSPAAAWISGQVLTVS 248
Query: 622 GG 623
GG
Sbjct: 249 GG 250
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 95/187 (50%), Gaps = 5/187 (2%)
Query: 9 RLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVV 68
L VA+VT ++ GIG AIA + GASVV++ K +++ G + I G+
Sbjct: 9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAI-GLE 67
Query: 69 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGP-VVECPENVWDKIFEVNVKSTF 127
C+V ++ R+ + + A +FG I +LV+NA GP + P + ++ F++N+ S F
Sbjct: 68 CNVTDEQHREAVIKAALDQFGKITVLVNNAG---GGGPKPFDMPMSDFEWAFKLNLFSLF 124
Query: 128 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 187
L+Q P+++K + +Y SK A+ LT+ +A D+ IR
Sbjct: 125 RLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIR 184
Query: 188 VNCLAPG 194
VN +APG
Sbjct: 185 VNAIAPG 191
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 638 IGAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
+ +Y SK A+ LT+ +A D+ P IRVN +APG I+T
Sbjct: 157 MASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKT 195
>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
pdb|2HSD|B Chain B, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
pdb|2HSD|C Chain C, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
pdb|2HSD|D Chain D, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
Length = 253
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 123/249 (49%), Gaps = 15/249 (6%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISS-RKESNVNKAVETLQKEGHQKISGVV 437
L+GK ++T + G+G A++ GA VV++ E A E +Q +
Sbjct: 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHL---- 58
Query: 438 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENV--WDKIFEVNVKST 495
V +ED Q++ +A ++FG +D LV+NA + +TG +E E+V + K+ E+N+
Sbjct: 59 -DVTIEEDWQRVVAYAREEFGSVDGLVNNAGI--STGMFLET-ESVERFRKVVEINLTGV 114
Query: 496 FLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 555
F+ + V+P ++ L L +Y SK + GL+K A +L ++ I
Sbjct: 115 FIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRI 174
Query: 556 RVNCLAPGITKTKFAAALYETE-EAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYIT 614
RVN + PG+T T A ET E N PMGR+ P E+ G V L SD +SY+T
Sbjct: 175 RVNSVHPGMTYTPMTA---ETGIRQGEGNYPNTPMGRVGEPGEIAGAVVKLLSDTSSYVT 231
Query: 615 GEVIVAAGG 623
G + GG
Sbjct: 232 GAELAVDGG 240
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 95/189 (50%), Gaps = 11/189 (5%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISS-RKESNVNKAVETLQKEGHQKISGVV 68
L+GK ++T + G+G A++ A GA VV++ E A E +Q +
Sbjct: 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHL---- 58
Query: 69 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENV--WDKIFEVNVKST 126
V +ED Q++ +A ++FG +D LV+NA + +TG +E E+V + K+ E+N+
Sbjct: 59 -DVTIEEDWQRVVAYAREEFGSVDGLVNNAGI--STGMFLET-ESVERFRKVVEINLTGV 114
Query: 127 FLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 186
F+ + V+P ++ L L +Y SK + GL+K A +L ++ I
Sbjct: 115 FIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRI 174
Query: 187 RVNCLAPGI 195
RVN + PG+
Sbjct: 175 RVNSVHPGM 183
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 620 AAGGMQSRLTKSTVEFRFIGAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
AAG M LT S Y SK + GL+K+ A +L + IRVN + PG+ T
Sbjct: 139 AAGLMGLALTSS---------YGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYT 186
>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DML|B Chain B, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DML|C Chain C, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DML|D Chain D, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DMM|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
pdb|4DMM|B Chain B, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
pdb|4DMM|C Chain C, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
pdb|4DMM|D Chain D, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
Length = 269
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 120/247 (48%), Gaps = 7/247 (2%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L ++A+VT +S GIG AIA L+ GA V ++ + V + V
Sbjct: 26 LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKA 85
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
V+++ + + LF +++G +D+LV+NA + T ++ + W + ++N+ FL
Sbjct: 86 DVSQESEVEALFAAVIERWGRLDVLVNNAGITRDT-LLLRMKRDDWQSVLDLNLGGVFLC 144
Query: 499 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 558
++ + K+ YS +K ++GLTK VA++LAS I VN
Sbjct: 145 SRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGITVN 204
Query: 559 CLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSD-DASYITGEV 617
+APG T +E A E + +P+GR E+ G+V FL +D A+YITG+V
Sbjct: 205 AVAPGFIATDM-----TSELAAEKLLEVIPLGRYGEAAEVAGVVRFLAADPAAAYITGQV 259
Query: 618 IVAAGGM 624
I GG+
Sbjct: 260 INIDGGL 266
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 1/185 (0%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
LT ++A+VT +S GIG AIA L+A GA V ++ + V + V
Sbjct: 26 LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKA 85
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
V+++ + + LF +++G +D+LV+NA + T ++ + W + ++N+ FL
Sbjct: 86 DVSQESEVEALFAAVIERWGRLDVLVNNAGITRDT-LLLRMKRDDWQSVLDLNLGGVFLC 144
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
++ + K+ YS +K ++GLTK VA++LAS I VN
Sbjct: 145 SRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGITVN 204
Query: 190 CLAPG 194
+APG
Sbjct: 205 AVAPG 209
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGDRMIAMLSTDKL 691
YS +K + GLTK VA++LA I VN +APG I T M + L+ +KL
Sbjct: 178 YSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATD----MTSELAAEKL 224
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 692 YGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKKK 745
+G +D+LV+NA + + L+ W + D+NL FL ++ M K++
Sbjct: 104 WGRLDVLVNNAGITR-DTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQR 156
>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene
Reductase In Complex With Nadph And Pyroquilon
Length = 274
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 130/257 (50%), Gaps = 15/257 (5%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNV-NKAVETLQKEGHQKISGVV 437
LAGKVA+ T + GIG IA L GASVV++ S + V L+K G Q ++ +
Sbjct: 19 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVA-IQ 77
Query: 438 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 497
++K + LF+ A FGG+D ++SN+ + +E + ++DK+F +N + F
Sbjct: 78 ADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDE-LEVTQELFDKVFNLNTRGQFF 136
Query: 498 LTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 557
+ Q+ L + R R + Y+ SK A+ G +A A D ++ + V
Sbjct: 137 VAQQGLKHCR-RGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTV 195
Query: 558 NCLAPGITKT--------KFAAALYET--EEAHEIAVSNV-PMGRLAVPDEMGGIVAFLC 606
NC+APG KT +A Y+ +E + ++N+ P+ R+ P ++G V+ LC
Sbjct: 196 NCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALC 255
Query: 607 SDDASYITGEVIVAAGG 623
+++ +I G+VI GG
Sbjct: 256 QEESEWINGQVIKLTGG 272
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 4/186 (2%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNV-NKAVETLQKEGHQKISGVV 68
L GKVA+ T + GIG IA L GASVV++ S + V L+K G Q ++ +
Sbjct: 19 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVA-IQ 77
Query: 69 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 128
++K + LF+ A FGG+D ++SN+ + +E + ++DK+F +N + F
Sbjct: 78 ADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDE-LEVTQELFDKVFNLNTRGQFF 136
Query: 129 LTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 188
+ Q+ L + R R + Y+ SK A+ G +A A D ++ + V
Sbjct: 137 VAQQGLKHCR-RGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTV 195
Query: 189 NCLAPG 194
NC+APG
Sbjct: 196 NCIAPG 201
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGD 680
Y+ SK A+ G + A D + + VNC+APG ++T D
Sbjct: 170 YAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFD 209
>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM
SINORHIZOBIUM Meliloti 1021
Length = 271
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 116/248 (46%), Gaps = 5/248 (2%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
LAGK A VT S GIG AIAKRL+ EGA+V ++ + +AV + ++ + +
Sbjct: 29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRA 88
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
E ++ + GG+DILV++A + + P+ E +D++ VN ++ F+
Sbjct: 89 DNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSA-PLEETTVADFDEVXAVNFRAPFVA 147
Query: 499 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 558
+ ++ L P+ + YS SK AL GLTK +A+DL I VN
Sbjct: 148 IRSASRHLGD-GGRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLGPRGITVN 206
Query: 559 CLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVI 618
+ PG T T A + EA + G P ++ G+VA+L ++TG +
Sbjct: 207 IVHPGSTDTDXNPADGDHAEAQR---ERIATGSYGEPQDIAGLVAWLAGPQGKFVTGASL 263
Query: 619 VAAGGMQS 626
GG +
Sbjct: 264 TIDGGANA 271
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 90/185 (48%), Gaps = 2/185 (1%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L GK A VT S GIG AIAKRL+ EGA+V ++ + +AV + ++ + +
Sbjct: 29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRA 88
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
E ++ + GG+DILV++A + + P+ E +D++ VN ++ F+
Sbjct: 89 DNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSA-PLEETTVADFDEVXAVNFRAPFVA 147
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
+ ++ L P+ + YS SK AL GLTK +A+DL I VN
Sbjct: 148 IRSASRHLGD-GGRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLGPRGITVN 206
Query: 190 CLAPG 194
+ PG
Sbjct: 207 IVHPG 211
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 23/40 (57%)
Query: 638 IGAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTK 677
I YS SK AL GLTK +A DL P I VN + PG T
Sbjct: 177 ISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTD 216
>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From
B. Subtilis (Apo Form)
pdb|3OIC|D Chain D, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From
B. Subtilis (Apo Form)
pdb|3OID|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From
B. Subtilis (Complex With Nadp And Tcl)
pdb|3OID|B Chain B, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From
B. Subtilis (Complex With Nadp And Tcl)
pdb|3OID|C Chain C, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From
B. Subtilis (Complex With Nadp And Tcl)
pdb|3OID|D Chain D, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From
B. Subtilis (Complex With Nadp And Tcl)
Length = 258
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 115/243 (47%), Gaps = 3/243 (1%)
Query: 382 KVAVVTASSDGIGFAIAKRLSTEGASVVIS-SRKESNVNKAVETLQKEGHQKISGVVCHV 440
K A+VT SS G+G A A RL+ G ++VI+ +R + + E ++K G K+ V +V
Sbjct: 5 KCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLG-VKVLVVKANV 63
Query: 441 AKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQ 500
+ +++F+ ++ FG +D+ V+NAA + PV+E E WD +N K+ Q
Sbjct: 64 GQPAKIKEMFQQIDETFGRLDVFVNNAA-SGVLRPVMELEETHWDWTMNINAKALLFCAQ 122
Query: 501 EVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCL 560
E + K + + VSK AL LT+ +A +L+ + I VN +
Sbjct: 123 EAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAV 182
Query: 561 APGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVIVA 620
+ G T E+ E A N P GR+ +M V FL S A I G+ I+
Sbjct: 183 SGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRGQTIIV 242
Query: 621 AGG 623
GG
Sbjct: 243 DGG 245
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 3/183 (1%)
Query: 13 KVAVVTASSDGIGFAIAKRLSAEGASVVIS-SRKESNVNKAVETLQKEGHQKISGVVCHV 71
K A+VT SS G+G A A RL+ G ++VI+ +R + + E ++K G K+ V +V
Sbjct: 5 KCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLG-VKVLVVKANV 63
Query: 72 AKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQ 131
+ +++F+ ++ FG +D+ V+NAA + PV+E E WD +N K+ Q
Sbjct: 64 GQPAKIKEMFQQIDETFGRLDVFVNNAA-SGVLRPVMELEETHWDWTMNINAKALLFCAQ 122
Query: 132 EVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCL 191
E + K + + VSK AL LT+ +A +L+ + I VN +
Sbjct: 123 EAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAV 182
Query: 192 APG 194
+ G
Sbjct: 183 SGG 185
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
Query: 664 IRVNCLAPGLIRTKFGDRMIAMLSTDKLYGGIDILVSNAAVNPANEPLVECSEVVWDKIF 723
++ N P I+ F D+ +G +D+ V+NAA + P++E E WD
Sbjct: 59 VKANVGQPAKIKEMFQ-------QIDETFGRLDVFVNNAA-SGVLRPVMELEETHWDWTM 110
Query: 724 DVNLKSSFLLTQEVLPYMRK 743
++N K+ QE M K
Sbjct: 111 NINAKALLFCAQEAAKLMEK 130
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 635 FRFIGAYS---VSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
R++ Y+ VSK AL LT+ +A +L+P+ I VN ++ G I T
Sbjct: 145 IRYLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDT 189
>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And 4-nitro-inden-1-one
pdb|1DOH|B Chain B, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And 4-nitro-inden-1-one
pdb|1G0N|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And 4,5,6,7-Tetrachloro-Phthalide
pdb|1G0N|B Chain B, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And 4,5,6,7-Tetrachloro-Phthalide
pdb|1G0O|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And Pyroquilon
pdb|1G0O|B Chain B, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And Pyroquilon
pdb|1G0O|C Chain C, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And Pyroquilon
pdb|1G0O|D Chain D, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And Pyroquilon
Length = 283
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 122/260 (46%), Gaps = 13/260 (5%)
Query: 375 NASRLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKIS 434
++ L GKVA+VT + GIG +A L G V+++ + + V K+ +
Sbjct: 23 QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAA 82
Query: 435 GVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKS 494
V +V ED ++FE A K FG +DI+ SN+ V + G V + +D++F +N +
Sbjct: 83 CVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGV-VSFGHVKDVTPEEFDRVFTINTRG 141
Query: 495 TFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASEN 554
F + +E ++ A K YS SK A+ + +A D+A +
Sbjct: 142 QFFVAREAYKHLEIGGRLILMGSITGQAKAVPK-HAVYSGSKGAIETFARCMAIDMADKK 200
Query: 555 IRVNCLAPGITKTKFAAAL----------YETEEAHEI-AVSNVPMGRLAVPDEMGGIVA 603
I VN +APG KT A+ EE E AV P+ R+ +P ++ +V
Sbjct: 201 ITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVC 260
Query: 604 FLCSDDASYITGEVIVAAGG 623
FL S+D ++TG+VI GG
Sbjct: 261 FLASNDGGWVTGKVIGIDGG 280
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 2/189 (1%)
Query: 6 NASRLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKIS 65
++ L GKVA+VT + GIG +A L G V+++ + + V K+ +
Sbjct: 23 QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAA 82
Query: 66 GVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKS 125
V +V ED ++FE A K FG +DI+ SN+ V + G V + +D++F +N +
Sbjct: 83 CVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGV-VSFGHVKDVTPEEFDRVFTINTRG 141
Query: 126 TFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASEN 185
F + +E ++ A K YS SK A+ + +A D+A +
Sbjct: 142 QFFVAREAYKHLEIGGRLILMGSITGQAKAVPK-HAVYSGSKGAIETFARCMAIDMADKK 200
Query: 186 IRVNCLAPG 194
I VN +APG
Sbjct: 201 ITVNVVAPG 209
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
YS SK A+ + +A D+A + I VN +APG I+T
Sbjct: 178 YSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDM 215
>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And An Active Site Inhibitor
pdb|1YBV|B Chain B, Structure Of Trihydroxynaphthalene Reductase In Complex
With Nadph And An Active Site Inhibitor
Length = 283
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 122/260 (46%), Gaps = 13/260 (5%)
Query: 375 NASRLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKIS 434
++ L GKVA+VT + GIG +A L G V+++ + + V K+ +
Sbjct: 23 QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAA 82
Query: 435 GVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKS 494
V +V ED ++FE A K FG +DI+ SN+ V + G V + +D++F +N +
Sbjct: 83 CVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGV-VSFGHVKDVTPEEFDRVFTINTRG 141
Query: 495 TFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASEN 554
F + +E ++ A K YS SK A+ + +A D+A +
Sbjct: 142 QFFVAREAYKHLEIGGRLILMGSITGQAKAVPK-HAVYSGSKGAIETFARCMAIDMADKK 200
Query: 555 IRVNCLAPGITKTKFAAAL----------YETEEAHEI-AVSNVPMGRLAVPDEMGGIVA 603
I VN +APG KT A+ EE E AV P+ R+ +P ++ +V
Sbjct: 201 ITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVC 260
Query: 604 FLCSDDASYITGEVIVAAGG 623
FL S+D ++TG+VI GG
Sbjct: 261 FLASNDGGWVTGKVIGIDGG 280
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 2/189 (1%)
Query: 6 NASRLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKIS 65
++ L GKVA+VT + GIG +A L G V+++ + + V K+ +
Sbjct: 23 QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAA 82
Query: 66 GVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKS 125
V +V ED ++FE A K FG +DI+ SN+ V + G V + +D++F +N +
Sbjct: 83 CVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGV-VSFGHVKDVTPEEFDRVFTINTRG 141
Query: 126 TFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASEN 185
F + +E ++ A K YS SK A+ + +A D+A +
Sbjct: 142 QFFVAREAYKHLEIGGRLILMGSITGQAKAVPK-HAVYSGSKGAIETFARCMAIDMADKK 200
Query: 186 IRVNCLAPG 194
I VN +APG
Sbjct: 201 ITVNVVAPG 209
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
YS SK A+ + +A D+A + I VN +APG I+T
Sbjct: 178 YSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDM 215
>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|B Chain B, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|C Chain C, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|D Chain D, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|E Chain E, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|F Chain F, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|G Chain G, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|H Chain H, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
Length = 291
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 131/256 (51%), Gaps = 17/256 (6%)
Query: 376 ASRLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISS-RKESNVNKAVETLQKEGHQKIS 434
+ +L GK ++T GIG A++ + EGA++ I+ +E + N+ + ++KEG
Sbjct: 42 SEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG----- 96
Query: 435 GVVC-----HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVN-PATGPVVECPENVWDKIF 488
V C ++ ++ + + + ++ G ++ILV+N A P G E + +K F
Sbjct: 97 -VKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQL-EKTF 154
Query: 489 EVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQ 548
+N+ S F +T+ L ++++ + + L YS +K A++ T++++Q
Sbjct: 155 RINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGN--ETLIDYSATKGAIVAFTRSLSQ 212
Query: 549 DLASENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSD 608
L + IRVN +APG T + ++ ++ + SNVPM R P E+ +L S
Sbjct: 213 SLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFG-SNVPMQRPGQPYELAPAYVYLASS 271
Query: 609 DASYITGEVIVAAGGM 624
D+SY+TG++I GG+
Sbjct: 272 DSSYVTGQMIHVNGGV 287
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 99/195 (50%), Gaps = 16/195 (8%)
Query: 7 ASRLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISS-RKESNVNKAVETLQKEGHQKIS 65
+ +L GK ++T GIG A++ + EGA++ I+ +E + N+ + ++KEG
Sbjct: 42 SEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG----- 96
Query: 66 GVVC-----HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVN-PATGPVVECPENVWDKIF 119
V C ++ ++ + + + ++ G ++ILV+N A P G E + +K F
Sbjct: 97 -VKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQL-EKTF 154
Query: 120 EVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQ 179
+N+ S F +T+ L ++++ + + L YS +K A++ T++++Q
Sbjct: 155 RINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGN--ETLIDYSATKGAIVAFTRSLSQ 212
Query: 180 DLASENIRVNCLAPG 194
L + IRVN +APG
Sbjct: 213 SLVQKGIRVNGVAPG 227
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPG-----LIRTKFGDRMIAMLSTD 689
YS +K A+ T+ +++ L + IRVN +APG LI + F ++ ++ ++
Sbjct: 196 YSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFGSN 249
>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate
Dehydrogenase From Sinorhizobium Meliloti
pdb|3V2H|B Chain B, The Crystal Structure Of D-Beta-Hydroxybutyrate
Dehydrogenase From Sinorhizobium Meliloti
Length = 281
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 119/260 (45%), Gaps = 26/260 (10%)
Query: 382 KVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 441
K AV+T S+ GIG AIA+ L+ GA++V++ + + T+ E SG V H
Sbjct: 26 KTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPD---EIRTVTDEVAGLSSGTVLH-- 80
Query: 442 KKEDRQKLFEHAE------KKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKST 495
D K E A+ +FGG DILV+NA V + + P WD+I VN+ S+
Sbjct: 81 HPADXTKPSEIADXXAXVADRFGGADILVNNAGVQFVE-KIEDFPVEQWDRIIAVNLSSS 139
Query: 496 FLLTQEVLPYIRKRNXXXXXXXXXXXXL--APFKLLGAYSVSKTALLGLTKAVAQDLASE 553
F + +P +K+ L +PFK AY +K + GLTK VA ++A
Sbjct: 140 FHTIRGAIPPXKKKGWGRIINIASAHGLVASPFK--SAYVAAKHGIXGLTKTVALEVAES 197
Query: 554 NIRVNCLAPGITKTKFAA----------ALYETEEAHEIAVSNVPMGRLAVPDEMGGIVA 603
+ VN + PG T + E + +E+ + P + +++ +
Sbjct: 198 GVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVXLKGQPTKKFITVEQVASLAL 257
Query: 604 FLCSDDASYITGEVIVAAGG 623
+L DDA+ ITG + GG
Sbjct: 258 YLAGDDAAQITGTHVSXDGG 277
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 93/190 (48%), Gaps = 16/190 (8%)
Query: 13 KVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 72
K AV+T S+ GIG AIA+ L+ GA++V++ + + T+ E SG V H
Sbjct: 26 KTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPD---EIRTVTDEVAGLSSGTVLH-- 80
Query: 73 KKEDRQKLFEHAE------KKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKST 126
D K E A+ +FGG DILV+NA V + + P WD+I VN+ S+
Sbjct: 81 HPADXTKPSEIADXXAXVADRFGGADILVNNAGVQFVE-KIEDFPVEQWDRIIAVNLSSS 139
Query: 127 FLLTQEVLPYIRKRNXXXXXXXXXXXXL--APFKLLGAYSVSKTALLGLTKAVAQDLASE 184
F + +P +K+ L +PFK AY +K + GLTK VA ++A
Sbjct: 140 FHTIRGAIPPXKKKGWGRIINIASAHGLVASPFK--SAYVAAKHGIXGLTKTVALEVAES 197
Query: 185 NIRVNCLAPG 194
+ VN + PG
Sbjct: 198 GVTVNSICPG 207
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 692 YGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKK 744
+GG DILV+NA V E + + WD+I VNL SSF + +P +KK
Sbjct: 102 FGGADILVNNAGVQFV-EKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPXKKK 153
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 637 FIGAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGDRMI 683
F AY +K + GLTK VA ++A + VN + PG + T ++ I
Sbjct: 172 FKSAYVAAKHGIXGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQI 218
>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE
FROM Bacillus Anthracis Str. Ames Ancestor
pdb|3T4X|B Chain B, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE
FROM Bacillus Anthracis Str. Ames Ancestor
Length = 267
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 129/263 (49%), Gaps = 23/263 (8%)
Query: 378 RLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKI-SGV 436
+L GK A+VT S+ GIG AIA L EGA+V+I+ R+E NVN+ ++ ++ + I V
Sbjct: 7 QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPV 66
Query: 437 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPV--VECPENVWDKIFEVNVKS 494
V + ++ Q + E K+ +DIL++N + PV + P+ W K+FEVN+ S
Sbjct: 67 VADLGTEQGCQDVIE----KYPKVDILINNLGI---FEPVEYFDIPDEDWFKLFEVNIXS 119
Query: 495 TFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASEN 554
LT+ L +R + P + YS +KT L L++++A+ N
Sbjct: 120 GVRLTRSYLKKXIERKEGRVIFIASEAAIXPSQEXAHYSATKTXQLSLSRSLAELTTGTN 179
Query: 555 IRVNCLAPGITKTKFAA----ALYETEE------AHEIAVSNVP---MGRLAVPDEMGGI 601
+ VN + PG T T+ +LY E+ N P + RL P+E+ +
Sbjct: 180 VTVNTIXPGSTLTEGVETXLNSLYPNEQLTIEEAEKRFXKENRPTSIIQRLIRPEEIAHL 239
Query: 602 VAFLCSDDASYITGEVIVAAGGM 624
V FL S +S I G + GG+
Sbjct: 240 VTFLSSPLSSAINGSALRIDGGL 262
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 100/189 (52%), Gaps = 10/189 (5%)
Query: 9 RLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKI-SGV 67
+L GK A+VT S+ GIG AIA L AEGA+V+I+ R+E NVN+ ++ ++ + I V
Sbjct: 7 QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPV 66
Query: 68 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPV--VECPENVWDKIFEVNVKS 125
V + ++ Q + E K+ +DIL++N + PV + P+ W K+FEVN+ S
Sbjct: 67 VADLGTEQGCQDVIE----KYPKVDILINNLGI---FEPVEYFDIPDEDWFKLFEVNIXS 119
Query: 126 TFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASEN 185
LT+ L +R + P + YS +KT L L++++A+ N
Sbjct: 120 GVRLTRSYLKKXIERKEGRVIFIASEAAIXPSQEXAHYSATKTXQLSLSRSLAELTTGTN 179
Query: 186 IRVNCLAPG 194
+ VN + PG
Sbjct: 180 VTVNTIXPG 188
>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase
(Apo Form) From Fungus Cochliobolus Lunatus
pdb|3QWF|A Chain A, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|B Chain B, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|C Chain C, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|D Chain D, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|E Chain E, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|F Chain F, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|G Chain G, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|H Chain H, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWI|A Chain A, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWI|B Chain B, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWI|C Chain C, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWI|D Chain D, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWH|A Chain A, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
pdb|3QWH|B Chain B, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
pdb|3QWH|C Chain C, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
pdb|3QWH|D Chain D, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
Length = 270
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 121/258 (46%), Gaps = 16/258 (6%)
Query: 378 RLAGKVAVVTASSDGIGFAIAKRLSTEGASVVIS-SRKESNVNKAVETLQKEGHQKISGV 436
RL GKVA+VT S GIG A+A L GA VV++ + + K V ++ G I+ +
Sbjct: 15 RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIA-I 73
Query: 437 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 496
+ + + KLF+ A FG +DI VSN+ V + G + + E +D++F +N + F
Sbjct: 74 KADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGV-VSFGHLKDVTEEEFDRVFSLNTRGQF 132
Query: 497 LLTQEVLPYIRKRNXXXXXXXXXXXXLA-PFKLLGAYSVSKTALLGLTKAVAQDLASENI 555
+ +E ++ + + P L YS SK A+ + ++D + I
Sbjct: 133 FVAREAYRHLTEGGRIVLTSSNTSKDFSVPKHSL--YSGSKGAVDSFVRIFSKDCGDKKI 190
Query: 556 RVNCLAPGITKTKFAAAL----------YETEEAHEIAVSNVPMGRLAVPDEMGGIVAFL 605
VN +APG T T + Y E+ ++A P+ R P ++ +V FL
Sbjct: 191 TVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGFL 250
Query: 606 CSDDASYITGEVIVAAGG 623
S + ++ G+V+ GG
Sbjct: 251 VSKEGEWVNGKVLTLDGG 268
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 92/188 (48%), Gaps = 6/188 (3%)
Query: 9 RLTGKVAVVTASSDGIGFAIAKRLSAEGASVVIS-SRKESNVNKAVETLQKEGHQKISGV 67
RL GKVA+VT S GIG A+A L GA VV++ + + K V ++ G I+ +
Sbjct: 15 RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIA-I 73
Query: 68 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 127
+ + + KLF+ A FG +DI VSN+ V + G + + E +D++F +N + F
Sbjct: 74 KADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGV-VSFGHLKDVTEEEFDRVFSLNTRGQF 132
Query: 128 LLTQEVLPYIRKRNXXXXXXXXXXXXLA-PFKLLGAYSVSKTALLGLTKAVAQDLASENI 186
+ +E ++ + + P L YS SK A+ + ++D + I
Sbjct: 133 FVAREAYRHLTEGGRIVLTSSNTSKDFSVPKHSL--YSGSKGAVDSFVRIFSKDCGDKKI 190
Query: 187 RVNCLAPG 194
VN +APG
Sbjct: 191 TVNAVAPG 198
>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
pdb|1HDC|B Chain B, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
pdb|1HDC|C Chain C, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
pdb|1HDC|D Chain D, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
Length = 254
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 123/250 (49%), Gaps = 16/250 (6%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISS-RKESNVNKAVETLQKEGHQKISGVV 437
L+GK ++T + G+G A++ GA VV++ E A E +Q +
Sbjct: 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLD--- 59
Query: 438 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENV--WDKIFEVNVKST 495
V +ED Q++ +A ++FG +D LV+NA + +TG +E E+V + K+ E+N+
Sbjct: 60 --VTIEEDWQRVVAYAREEFGSVDGLVNNAGI--STGMFLET-ESVERFRKVVEINLTGV 114
Query: 496 FLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 555
F+ + V+P ++ L L +Y SK + GL+K A +L ++ I
Sbjct: 115 FIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRI 174
Query: 556 RVNCLAPGITKTKFAAALYETE-EAHEIAVSNVPMGRLA-VPDEMGGIVAFLCSDDASYI 613
RVN + PG+T T A ET E N PMGR+ P E+ G V L SD +SY+
Sbjct: 175 RVNSVHPGMTYTPMTA---ETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYV 231
Query: 614 TGEVIVAAGG 623
TG + GG
Sbjct: 232 TGAELAVDGG 241
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 95/189 (50%), Gaps = 11/189 (5%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISS-RKESNVNKAVETLQKEGHQKISGVV 68
L+GK ++T + G+G A++ A GA VV++ E A E +Q +
Sbjct: 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLD--- 59
Query: 69 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENV--WDKIFEVNVKST 126
V +ED Q++ +A ++FG +D LV+NA + +TG +E E+V + K+ E+N+
Sbjct: 60 --VTIEEDWQRVVAYAREEFGSVDGLVNNAGI--STGMFLET-ESVERFRKVVEINLTGV 114
Query: 127 FLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 186
F+ + V+P ++ L L +Y SK + GL+K A +L ++ I
Sbjct: 115 FIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRI 174
Query: 187 RVNCLAPGI 195
RVN + PG+
Sbjct: 175 RVNSVHPGM 183
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 620 AAGGMQSRLTKSTVEFRFIGAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
AAG M LT S Y SK + GL+K+ A +L + IRVN + PG+ T
Sbjct: 139 AAGLMGLALTSS---------YGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYT 186
>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein
From Sinorhizobium Meliloti 1021 In Complex With Nadp
pdb|4ESO|B Chain B, Crystal Structure Of A Putative Oxidoreductase Protein
From Sinorhizobium Meliloti 1021 In Complex With Nadp
pdb|4ESO|C Chain C, Crystal Structure Of A Putative Oxidoreductase Protein
From Sinorhizobium Meliloti 1021 In Complex With Nadp
pdb|4ESO|D Chain D, Crystal Structure Of A Putative Oxidoreductase Protein
From Sinorhizobium Meliloti 1021 In Complex With Nadp
Length = 255
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 12/255 (4%)
Query: 381 GKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHV 440
GK A+V + G G A +RL GA V+++ R ESN+ + +++E ++ + +
Sbjct: 8 GKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIAR----IREEFGPRVHALRSDI 63
Query: 441 AKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQ 500
A + L A + G ID+L NA V+ P + E +D+ F VN K F Q
Sbjct: 64 ADLNEIAVLGAAAGQTLGAIDLLHINAGVSELE-PFDQVSEASYDRQFAVNTKGAFFTVQ 122
Query: 501 EVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCL 560
+ P IR+ P + YS SK AL+ +A +L IRVN +
Sbjct: 123 RLTPLIREGGSIVFTSSVADEGGHPGXSV--YSASKAALVSFASVLAAELLPRGIRVNSV 180
Query: 561 APGI--TKTKFAAALYETEEAHEIAVSN--VPMGRLAVPDEMGGIVAFLCSDDASYITGE 616
+PG T TK A + E E A + + P R DE+ V FL +A++ TG
Sbjct: 181 SPGFIDTPTKGVAGITEAERAEFKTLGDNITPXKRNGTADEVARAVLFLAF-EATFTTGA 239
Query: 617 VIVAAGGMQSRLTKS 631
+ GG+ +L+ +
Sbjct: 240 KLAVDGGLGQKLSTA 254
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 7/184 (3%)
Query: 12 GKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHV 71
GK A+V + G G A +RL GA V+++ R ESN+ + +++E ++ + +
Sbjct: 8 GKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIAR----IREEFGPRVHALRSDI 63
Query: 72 AKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQ 131
A + L A + G ID+L NA V+ P + E +D+ F VN K F Q
Sbjct: 64 ADLNEIAVLGAAAGQTLGAIDLLHINAGVSELE-PFDQVSEASYDRQFAVNTKGAFFTVQ 122
Query: 132 EVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCL 191
+ P IR+ P + YS SK AL+ +A +L IRVN +
Sbjct: 123 RLTPLIREGGSIVFTSSVADEGGHPGXSV--YSASKAALVSFASVLAAELLPRGIRVNSV 180
Query: 192 APGI 195
+PG
Sbjct: 181 SPGF 184
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
YS SK AL V+A +L P IRVN ++PG I T
Sbjct: 152 YSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDT 187
>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From
Sinorhizobium Meliloti 1021
pdb|3VC7|B Chain B, Crystal Structure Of A Putative Oxidoreductase From
Sinorhizobium Meliloti 1021
Length = 254
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 12/255 (4%)
Query: 381 GKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHV 440
GK A+V + G G A +RL GA V+++ R ESN+ + +++E ++ + +
Sbjct: 7 GKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIAR----IREEFGPRVHALRSDI 62
Query: 441 AKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQ 500
A + L A + G ID+L NA V+ P + E +D+ F VN K F Q
Sbjct: 63 ADLNEIAVLGAAAGQTLGAIDLLHINAGVSELE-PFDQVSEASYDRQFAVNTKGAFFTVQ 121
Query: 501 EVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCL 560
+ P IR+ P + YS SK AL+ +A +L IRVN +
Sbjct: 122 RLTPLIREGGSIVFTSSVADEGGHPGXSV--YSASKAALVSFASVLAAELLPRGIRVNSV 179
Query: 561 APGI--TKTKFAAALYETEEAHEIAVSN--VPMGRLAVPDEMGGIVAFLCSDDASYITGE 616
+PG T TK A + E E A + + P R DE+ V FL +A++ TG
Sbjct: 180 SPGFIDTPTKGVAGITEAERAEFKTLGDNITPXKRNGTADEVARAVLFLAF-EATFTTGA 238
Query: 617 VIVAAGGMQSRLTKS 631
+ GG+ +L+ +
Sbjct: 239 KLAVDGGLGQKLSTA 253
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 7/184 (3%)
Query: 12 GKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHV 71
GK A+V + G G A +RL GA V+++ R ESN+ + +++E ++ + +
Sbjct: 7 GKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIAR----IREEFGPRVHALRSDI 62
Query: 72 AKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQ 131
A + L A + G ID+L NA V+ P + E +D+ F VN K F Q
Sbjct: 63 ADLNEIAVLGAAAGQTLGAIDLLHINAGVSELE-PFDQVSEASYDRQFAVNTKGAFFTVQ 121
Query: 132 EVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCL 191
+ P IR+ P + YS SK AL+ +A +L IRVN +
Sbjct: 122 RLTPLIREGGSIVFTSSVADEGGHPGXSV--YSASKAALVSFASVLAAELLPRGIRVNSV 179
Query: 192 APGI 195
+PG
Sbjct: 180 SPGF 183
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
YS SK AL V+A +L P IRVN ++PG I T
Sbjct: 151 YSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDT 186
>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid
Dehydrogenase (Y167f Mutated Form) From Fungus
Cochliobolus Lunatus
Length = 270
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 121/258 (46%), Gaps = 16/258 (6%)
Query: 378 RLAGKVAVVTASSDGIGFAIAKRLSTEGASVVIS-SRKESNVNKAVETLQKEGHQKISGV 436
RL GKVA+VT S GIG A+A L GA VV++ + + K V ++ G I+ +
Sbjct: 15 RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIA-I 73
Query: 437 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 496
+ + + KLF+ A FG +DI VSN+ V + G + + E +D++F +N + F
Sbjct: 74 KADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGV-VSFGHLKDVTEEEFDRVFSLNTRGQF 132
Query: 497 LLTQEVLPYIRKRNXXXXXXXXXXXXLA-PFKLLGAYSVSKTALLGLTKAVAQDLASENI 555
+ +E ++ + + P L +S SK A+ + ++D + I
Sbjct: 133 FVAREAYRHLTEGGRIVLTSSNTSKDFSVPKHSL--FSGSKGAVDSFVRIFSKDCGDKKI 190
Query: 556 RVNCLAPGITKTKFAAAL----------YETEEAHEIAVSNVPMGRLAVPDEMGGIVAFL 605
VN +APG T T + Y E+ ++A P+ R P ++ +V FL
Sbjct: 191 TVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGFL 250
Query: 606 CSDDASYITGEVIVAAGG 623
S + ++ G+V+ GG
Sbjct: 251 VSKEGEWVNGKVLTLDGG 268
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 6/188 (3%)
Query: 9 RLTGKVAVVTASSDGIGFAIAKRLSAEGASVVIS-SRKESNVNKAVETLQKEGHQKISGV 67
RL GKVA+VT S GIG A+A L GA VV++ + + K V ++ G I+ +
Sbjct: 15 RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIA-I 73
Query: 68 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 127
+ + + KLF+ A FG +DI VSN+ V + G + + E +D++F +N + F
Sbjct: 74 KADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGV-VSFGHLKDVTEEEFDRVFSLNTRGQF 132
Query: 128 LLTQEVLPYIRKRNXXXXXXXXXXXXLA-PFKLLGAYSVSKTALLGLTKAVAQDLASENI 186
+ +E ++ + + P L +S SK A+ + ++D + I
Sbjct: 133 FVAREAYRHLTEGGRIVLTSSNTSKDFSVPKHSL--FSGSKGAVDSFVRIFSKDCGDKKI 190
Query: 187 RVNCLAPG 194
VN +APG
Sbjct: 191 TVNAVAPG 198
>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Complexed With Nad+
pdb|4IIN|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Complexed With Nad+
pdb|4IIN|C Chain C, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Complexed With Nad+
pdb|4IIN|D Chain D, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Complexed With Nad+
pdb|4IJK|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
pdb|4IJK|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
pdb|4IJK|C Chain C, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
pdb|4IJK|D Chain D, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Length = 271
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 117/250 (46%), Gaps = 3/250 (1%)
Query: 375 NASRLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKIS 434
NA + GK ++T +S GIG IAK L++ G V I+ R + V A++ +E K +
Sbjct: 23 NAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAA 82
Query: 435 GVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKS 494
+ A + D + + + GG+ LV+NA V + E+ + + + N+ S
Sbjct: 83 VIKFDAASESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTED-FHHVIDNNLTS 141
Query: 495 TFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASEN 554
F+ +E L + K YS SK ++ ++K+ A + A N
Sbjct: 142 AFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKGGMIAMSKSFAYEGALRN 201
Query: 555 IRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYIT 614
IR N + PG +T A L +E V N+P+ RL E+ VAFL SD +SYIT
Sbjct: 202 IRFNSVTPGFIETDMNANL--KDELKADYVKNIPLNRLGSAKEVAEAVAFLLSDHSSYIT 259
Query: 615 GEVIVAAGGM 624
GE + GG+
Sbjct: 260 GETLKVNGGL 269
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 86/190 (45%), Gaps = 1/190 (0%)
Query: 6 NASRLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKIS 65
NA + TGK ++T +S GIG IAK L++ G V I+ R + V A++ +E K +
Sbjct: 23 NAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAA 82
Query: 66 GVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKS 125
+ A + D + + + GG+ LV+NA V + E+ + + + N+ S
Sbjct: 83 VIKFDAASESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTED-FHHVIDNNLTS 141
Query: 126 TFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASEN 185
F+ +E L + K YS SK ++ ++K+ A + A N
Sbjct: 142 AFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKGGMIAMSKSFAYEGALRN 201
Query: 186 IRVNCLAPGI 195
IR N + PG
Sbjct: 202 IRFNSVTPGF 211
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 23/49 (46%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGDRMIAMLSTD 689
YS SK + ++K A + A NIR N + PG I T + L D
Sbjct: 179 YSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELKAD 227
>pdb|4IMR|A Chain A, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein)
Reductase (target Efi-506442) From Agrobacterium
Tumefaciens C58 With Nadp Bound
pdb|4IMR|B Chain B, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein)
Reductase (target Efi-506442) From Agrobacterium
Tumefaciens C58 With Nadp Bound
Length = 275
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 119/249 (47%), Gaps = 9/249 (3%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGH--QKISGV 436
L G+ A+VT SS GIG AIA+ L+ GA V++ K + + + G Q+++G
Sbjct: 31 LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGD 90
Query: 437 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 496
+ D L E AE +DILV NA+ P ++ ++ VN+ ST
Sbjct: 91 LSEAGAGTD---LIERAEA-IAPVDILVINASAQINATLSALTPNDLAFQL-AVNLGSTV 145
Query: 497 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 556
+ Q LP + R L P ++ AY+ +K A L ++ A+D A +N+
Sbjct: 146 DMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAATKAAQHNLIQSQARDFAGDNVL 205
Query: 557 VNCLAPGITKT-KFAAALYETEEAHEIAVSNVP-MGRLAVPDEMGGIVAFLCSDDASYIT 614
+N LAPG+ T + A + E + V + MGR P+EM G FL S+ S++T
Sbjct: 206 LNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMVGAALFLASEACSFMT 265
Query: 615 GEVIVAAGG 623
GE I GG
Sbjct: 266 GETIFLTGG 274
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 7/188 (3%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGH--QKISGV 67
L G+ A+VT SS GIG AIA+ L+ GA V++ K + + + G Q+++G
Sbjct: 31 LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGD 90
Query: 68 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 127
+ D L E AE +DILV NA+ P ++ ++ VN+ ST
Sbjct: 91 LSEAGAGTD---LIERAEA-IAPVDILVINASAQINATLSALTPNDLAFQL-AVNLGSTV 145
Query: 128 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 187
+ Q LP + R L P ++ AY+ +K A L ++ A+D A +N+
Sbjct: 146 DMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAATKAAQHNLIQSQARDFAGDNVL 205
Query: 188 VNCLAPGI 195
+N LAPG+
Sbjct: 206 LNTLAPGL 213
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 640 AYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
AY+ +K A L + A D A +N+ +N LAPGL+ T
Sbjct: 180 AYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDT 216
>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella
Enterica
pdb|3R3S|B Chain B, Structure Of The Ygha Oxidoreductase From Salmonella
Enterica
pdb|3R3S|C Chain C, Structure Of The Ygha Oxidoreductase From Salmonella
Enterica
pdb|3R3S|D Chain D, Structure Of The Ygha Oxidoreductase From Salmonella
Enterica
Length = 294
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 116/251 (46%), Gaps = 3/251 (1%)
Query: 374 VNASRLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISS-RKESNVNKAVETLQKEGHQK 432
V + RL + A+VT GIG A A + EGA V I+ E + V+ L +E +K
Sbjct: 42 VGSGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRK 101
Query: 433 ISGVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNV 492
+ ++ + + L A + GG+DIL A A + + + + F VNV
Sbjct: 102 AVLLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNV 161
Query: 493 KSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLAS 552
+ F +TQE +P + K +P L Y+ +K A+L ++ +A+ +A
Sbjct: 162 FALFWITQEAIPLLPKGASIITTSSIQAYQPSPHLL--DYAATKAAILNYSRGLAKQVAE 219
Query: 553 ENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASY 612
+ IRVN +APG T + +T++ PM R P E+ + +L S ++SY
Sbjct: 220 KGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSY 279
Query: 613 ITGEVIVAAGG 623
+T EV GG
Sbjct: 280 VTAEVHGVCGG 290
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 90/191 (47%), Gaps = 3/191 (1%)
Query: 5 VNASRLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISS-RKESNVNKAVETLQKEGHQK 63
V + RL + A+VT GIG A A + EGA V I+ E + V+ L +E +K
Sbjct: 42 VGSGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRK 101
Query: 64 ISGVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNV 123
+ ++ + + L A + GG+DIL A A + + + + F VNV
Sbjct: 102 AVLLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNV 161
Query: 124 KSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLAS 183
+ F +TQE +P + K +P L Y+ +K A+L ++ +A+ +A
Sbjct: 162 FALFWITQEAIPLLPKGASIITTSSIQAYQPSPHLL--DYAATKAAILNYSRGLAKQVAE 219
Query: 184 ENIRVNCLAPG 194
+ IRVN +APG
Sbjct: 220 KGIRVNIVAPG 230
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
Y+ +K A+ ++ +A+ +A + IRVN +APG I T
Sbjct: 199 YAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTAL 236
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 665 RVNCLAPGLIRTKFGDRMIAMLSTDKLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFD 724
R L PG + + R + + + L GG+DIL A A + + + + + F
Sbjct: 100 RKAVLLPGDLSDESFARSLVHKAREAL-GGLDILALVAGKQTAIPEIKDLTSEQFQQTFA 158
Query: 725 VNLKSSFLLTQEVLPYMRK 743
VN+ + F +TQE +P + K
Sbjct: 159 VNVFALFWITQEAIPLLPK 177
>pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From
Salmonella Enterica Subsp. Enterica Serovar Typhi Str.
Ct18
Length = 258
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 115/247 (46%), Gaps = 12/247 (4%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L ++ +VT +SDGIG A + GA+V++ R E + + + + E H +
Sbjct: 12 LQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQPQWFTL 71
Query: 439 HV--AKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 496
+ E+ +++ + + +D ++ NA + GP+ E +W + +VNV +TF
Sbjct: 72 DLLTCTAEECRQVADRIAAHYPRLDGVLHNAGLLGEIGPMSEQDPQIWQDVMQVNVNATF 131
Query: 497 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 556
+LTQ +LP + K + GAY+ SK A G+ + +A + + ++R
Sbjct: 132 MLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYATSKFATEGMMQVLADEYQNRSLR 191
Query: 557 VNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGE 616
VNC+ PG T+T A+ + TE+ +L P ++ + +L DD+ TG
Sbjct: 192 VNCINPGGTRTSMRASAFPTEDPQ----------KLKTPADIMPLYLWLMGDDSRRKTGM 241
Query: 617 VIVAAGG 623
A G
Sbjct: 242 TFDAQPG 248
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 91/187 (48%), Gaps = 2/187 (1%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L ++ +VT +SDGIG A + GA+V++ R E + + + + E H +
Sbjct: 12 LQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQPQWFTL 71
Query: 70 HV--AKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 127
+ E+ +++ + + +D ++ NA + GP+ E +W + +VNV +TF
Sbjct: 72 DLLTCTAEECRQVADRIAAHYPRLDGVLHNAGLLGEIGPMSEQDPQIWQDVMQVNVNATF 131
Query: 128 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 187
+LTQ +LP + K + GAY+ SK A G+ + +A + + ++R
Sbjct: 132 MLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYATSKFATEGMMQVLADEYQNRSLR 191
Query: 188 VNCLAPG 194
VNC+ PG
Sbjct: 192 VNCINPG 198
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 639 GAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
GAY+ SK A G+ +V+A++ ++RVNC+ PG RT
Sbjct: 165 GAYATSKFATEGMMQVLADEYQNRSLRVNCINPGGTRTSM 204
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 692 YGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQ 735
Y +D ++ NA + P+ E +W + VN+ ++F+LTQ
Sbjct: 92 YPRLDGVLHNAGLLGEIGPMSEQDPQIWQDVMQVNVNATFMLTQ 135
>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa
High-throughput Crystallographic Studies For Assessment
Of Potential Targets In Early Stage Drug Discovery.
pdb|4B79|B Chain B, The Aeropath Project And Pseudomonas Aeruginosa
High-throughput Crystallographic Studies For Assessment
Of Potential Targets In Early Stage Drug Discovery.
pdb|4AVY|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa
High-throughput Crystallographic Studies For Assessment
Of Potential Targets In Early Stage Drug Discovery.
pdb|4AVY|B Chain B, The Aeropath Project And Pseudomonas Aeruginosa
High-throughput Crystallographic Studies For Assessment
Of Potential Targets In Early Stage Drug Discovery
Length = 242
Score = 92.8 bits (229), Expect = 7e-19, Method: Composition-based stats.
Identities = 70/244 (28%), Positives = 109/244 (44%), Gaps = 15/244 (6%)
Query: 380 AGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCH 439
AG+ +VT S GIG AIA + + GA VV V+ H +I
Sbjct: 10 AGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP-------RHPRIRREELD 62
Query: 440 VAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLT 499
+ + Q+LFE + +D+LV+NA ++ E ++++ +N+ + L +
Sbjct: 63 ITDSQRLQRLFEALPR----LDVLVNNAGISRDRE---EYDLATFERVLRLNLSAAMLAS 115
Query: 500 QEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNC 559
Q P + +R AYS SK A++ LT+++A + A+E IRVN
Sbjct: 116 QLARPLLAQRGGSILNIASMYSTFGSADR-PAYSASKGAIVQLTRSLACEYAAERIRVNA 174
Query: 560 LAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVIV 619
+APG T A L EA + P+ R E+ AFLC AS++TG V+
Sbjct: 175 IAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAAAFLCGPGASFVTGAVLA 234
Query: 620 AAGG 623
GG
Sbjct: 235 VDGG 238
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 15/183 (8%)
Query: 12 GKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHV 71
G+ +VT S GIG AIA + + GA VV V+ H +I +
Sbjct: 11 GQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP-------RHPRIRREELDI 63
Query: 72 AKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQ 131
+ Q+LFE + +D+LV+NA ++ E ++++ +N+ + L +Q
Sbjct: 64 TDSQRLQRLFEALPR----LDVLVNNAGISRDRE---EYDLATFERVLRLNLSAAMLASQ 116
Query: 132 EVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCL 191
P + +R AYS SK A++ LT+++A + A+E IRVN +
Sbjct: 117 LARPLLAQRGGSILNIASMYSTFGSADR-PAYSASKGAIVQLTRSLACEYAAERIRVNAI 175
Query: 192 APG 194
APG
Sbjct: 176 APG 178
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 26/40 (65%)
Query: 640 AYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFG 679
AYS SK A+ LT+ +A + A E IRVN +APG I T G
Sbjct: 146 AYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLG 185
>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|B Chain B, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|C Chain C, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|D Chain D, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|E Chain E, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|F Chain F, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|G Chain G, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|H Chain H, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
Length = 291
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 129/256 (50%), Gaps = 17/256 (6%)
Query: 376 ASRLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISS-RKESNVNKAVETLQKEGHQKIS 434
+ +L GK ++T GIG A++ + EGA++ I+ +E + N+ + ++KEG
Sbjct: 42 SEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG----- 96
Query: 435 GVVC-----HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVN-PATGPVVECPENVWDKIF 488
V C ++ ++ + + + ++ G ++ILV+N A P G E + +K F
Sbjct: 97 -VKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQL-EKTF 154
Query: 489 EVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQ 548
+N+ S F +T+ L ++++ + + L YS +K A++ T++++Q
Sbjct: 155 RINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGN--ETLIDYSATKGAIVAFTRSLSQ 212
Query: 549 DLASENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSD 608
L + IRVN +APG T + ++ ++ + SNVP R P E+ +L S
Sbjct: 213 SLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFG-SNVPXQRPGQPYELAPAYVYLASS 271
Query: 609 DASYITGEVIVAAGGM 624
D+SY+TG+ I GG+
Sbjct: 272 DSSYVTGQXIHVNGGV 287
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 99/195 (50%), Gaps = 16/195 (8%)
Query: 7 ASRLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISS-RKESNVNKAVETLQKEGHQKIS 65
+ +L GK ++T GIG A++ + EGA++ I+ +E + N+ + ++KEG
Sbjct: 42 SEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG----- 96
Query: 66 GVVC-----HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVN-PATGPVVECPENVWDKIF 119
V C ++ ++ + + + ++ G ++ILV+N A P G E + +K F
Sbjct: 97 -VKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQL-EKTF 154
Query: 120 EVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQ 179
+N+ S F +T+ L ++++ + + L YS +K A++ T++++Q
Sbjct: 155 RINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGN--ETLIDYSATKGAIVAFTRSLSQ 212
Query: 180 DLASENIRVNCLAPG 194
L + IRVN +APG
Sbjct: 213 SLVQKGIRVNGVAPG 227
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPG-----LIRTKFGDRMIAMLSTD 689
YS +K A+ T+ +++ L + IRVN +APG LI + F ++ ++ ++
Sbjct: 196 YSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFGSN 249
>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8,
Hsd17b8
pdb|2PD6|B Chain B, Structure Of Human Hydroxysteroid Dehydrogenase Type 8,
Hsd17b8
pdb|2PD6|C Chain C, Structure Of Human Hydroxysteroid Dehydrogenase Type 8,
Hsd17b8
pdb|2PD6|D Chain D, Structure Of Human Hydroxysteroid Dehydrogenase Type 8,
Hsd17b8
Length = 264
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 117/256 (45%), Gaps = 11/256 (4%)
Query: 377 SRLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGV 436
+RL +A+VT + GIG A++ RL+ EGA+V + + V L G ++
Sbjct: 3 NRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPR 62
Query: 437 VCHVAKKEDRQK------LFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEV 490
H A + D + L E + F +V + A ++ E+ WDK+ V
Sbjct: 63 GNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAV 122
Query: 491 NVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGA--YSVSKTALLGLTKAVAQ 548
N+K TFL+TQ + N + +G Y+ SK ++GLT+ A+
Sbjct: 123 NLKGTFLVTQAAAQALVS-NGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAAR 181
Query: 549 DLASENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSD 608
+L IR N + PG T + ++ + +PMG L P+++ +VAFL S+
Sbjct: 182 ELGRHGIRCNSVLPGFIATPMTQKV--PQKVVDKITEMIPMGHLGDPEDVADVVAFLASE 239
Query: 609 DASYITGEVIVAAGGM 624
D+ YITG + GG+
Sbjct: 240 DSGYITGTSVEVTGGL 255
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 86/195 (44%), Gaps = 9/195 (4%)
Query: 8 SRLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGV 67
+RL +A+VT + GIG A++ RL+ EGA+V + + V L G ++
Sbjct: 3 NRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPR 62
Query: 68 VCHVAKKEDRQK------LFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEV 121
H A + D + L E + F +V + A ++ E+ WDK+ V
Sbjct: 63 GNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAV 122
Query: 122 NVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGA--YSVSKTALLGLTKAVAQ 179
N+K TFL+TQ + N + +G Y+ SK ++GLT+ A+
Sbjct: 123 NLKGTFLVTQAAAQALVS-NGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAAR 181
Query: 180 DLASENIRVNCLAPG 194
+L IR N + PG
Sbjct: 182 ELGRHGIRCNSVLPG 196
Score = 35.8 bits (81), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 697 ILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQ 735
++VS A + +E L+ SE WDK+ VNLK +FL+TQ
Sbjct: 95 VVVSCAGITQ-DEFLLHMSEDDWDKVIAVNLKGTFLVTQ 132
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
Y+ SK + GLT+ A +L IR N + PG I T
Sbjct: 165 YAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIAT 200
>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain
Oxidoreductase (Sdr) In Complex With Nadp
pdb|3RKR|B Chain B, Crystal Structure Of A Metagenomic Short-Chain
Oxidoreductase (Sdr) In Complex With Nadp
pdb|3RKR|C Chain C, Crystal Structure Of A Metagenomic Short-Chain
Oxidoreductase (Sdr) In Complex With Nadp
pdb|3RKR|D Chain D, Crystal Structure Of A Metagenomic Short-Chain
Oxidoreductase (Sdr) In Complex With Nadp
Length = 262
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 116/244 (47%), Gaps = 13/244 (5%)
Query: 377 SRLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGV 436
S L+G+VAVVT +S GIG AIA++L + GA VV+++R + +AVE +
Sbjct: 25 SSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKL-RAVEREIVAAGGEAESH 83
Query: 437 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 496
C ++ + G D+LV+NA V GP+ WD + VN+K+ +
Sbjct: 84 ACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPY 143
Query: 497 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 556
LL + P + P AY+ SK L GL + A++L +R
Sbjct: 144 LLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQVR 203
Query: 557 VNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSD-DASYITG 615
V+ +APG +T+F L + A +G + PD++ +VA L + D S+I+
Sbjct: 204 VSLVAPGSVRTEFGVGLSAKKSA---------LGAIE-PDDIADVVALLATQADQSFIS- 252
Query: 616 EVIV 619
EV+V
Sbjct: 253 EVLV 256
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 88/187 (47%), Gaps = 1/187 (0%)
Query: 8 SRLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGV 67
S L+G+VAVVT +S GIG AIA++L + GA VV+++R + +AVE +
Sbjct: 25 SSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKL-RAVEREIVAAGGEAESH 83
Query: 68 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 127
C ++ + G D+LV+NA V GP+ WD + VN+K+ +
Sbjct: 84 ACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPY 143
Query: 128 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 187
LL + P + P AY+ SK L GL + A++L +R
Sbjct: 144 LLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQVR 203
Query: 188 VNCLAPG 194
V+ +APG
Sbjct: 204 VSLVAPG 210
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 640 AYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFG 679
AY+ SK L GL AE+L +RV+ +APG +RT+FG
Sbjct: 178 AYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFG 217
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 683 IAMLSTDKL--YGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPY 740
IA +T L +G D+LV+NA V PL WD + VNLK+ +LL + P
Sbjct: 93 IAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPA 152
Query: 741 MRKKK 745
M K
Sbjct: 153 MIAAK 157
>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|B Chain B, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|C Chain C, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|D Chain D, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|E Chain E, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|F Chain F, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|G Chain G, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
pdb|1ULS|H Chain H, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
Length = 245
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 114/246 (46%), Gaps = 10/246 (4%)
Query: 378 RLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVV 437
RL K ++T ++ GIG A + + EGA +V +E + +A E + VV
Sbjct: 2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHP------VV 55
Query: 438 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 497
VA ++ F A G +D +V A + + P W+ + VN+ +FL
Sbjct: 56 XDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHW-KXPLEDWELVLRVNLTGSFL 114
Query: 498 LTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 557
+ + R++N L Y+ S ++GLT+ +A +L IRV
Sbjct: 115 VAKAASEAXREKNPGSIVLTASRVYLGNLGQAN-YAASXAGVVGLTRTLALELGRWGIRV 173
Query: 558 NCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEV 617
N LAPG +T+ A + E+ E A++ P+GR P E+ FL SD++S+ITG+V
Sbjct: 174 NTLAPGFIETRXTAKV--PEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQV 231
Query: 618 IVAAGG 623
+ GG
Sbjct: 232 LFVDGG 237
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 80/187 (42%), Gaps = 8/187 (4%)
Query: 9 RLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVV 68
RL K ++T ++ GIG A + + EGA +V +E + +A E + VV
Sbjct: 2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHP------VV 55
Query: 69 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 128
VA ++ F A G +D +V A + + P W+ + VN+ +FL
Sbjct: 56 XDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHW-KXPLEDWELVLRVNLTGSFL 114
Query: 129 LTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 188
+ + R++N L Y+ S ++GLT+ +A +L IRV
Sbjct: 115 VAKAASEAXREKNPGSIVLTASRVYLGNLGQAN-YAASXAGVVGLTRTLALELGRWGIRV 173
Query: 189 NCLAPGI 195
N LAPG
Sbjct: 174 NTLAPGF 180
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 14/110 (12%)
Query: 628 LTKSTVEFRFIGA--YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGDRMIAM 685
LT S V +G Y+ S + GLT+ +A +L IRVN LAPG I T+ ++
Sbjct: 133 LTASRVYLGNLGQANYAASXAGVVGLTRTLALELGRWGIRVNTLAPGFIETRXTAKVPEK 192
Query: 686 LSTDKLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQ 735
+ ++ + A +PL EV + +F ++ +SSF+ Q
Sbjct: 193 VREKA--------IAATPLGRAGKPL----EVAYAALFLLSDESSFITGQ 230
>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate
3-Dehydrogenase From Agrobacterium Tumefaciens (Target
Efi-506435) With Bound Nadp
pdb|4HP8|B Chain B, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate
3-Dehydrogenase From Agrobacterium Tumefaciens (Target
Efi-506435) With Bound Nadp
Length = 247
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 123/256 (48%), Gaps = 14/256 (5%)
Query: 375 NASRLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKIS 434
N L G+ A+VT ++ G+G AIA L+ GA VV ++R+ + + ++ + K+G S
Sbjct: 3 NPFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPD--ETLDIIAKDGGNA-S 59
Query: 435 GVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKS 494
++ A + F A G DILV+NA + VE E WD++ +VN+K+
Sbjct: 60 ALLIDFADPLAAKDSFTDA-----GFDILVNNAGI-IRRADSVEFSELDWDEVMDVNLKA 113
Query: 495 TFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFK---LLGAYSVSKTALLGLTKAVAQDLA 551
F TQ + + L F+ + +Y+ +K + GLTK +A + A
Sbjct: 114 LFFTTQAFAKELLAKGRSGKVVNIAS--LLSFQGGIRVPSYTAAKHGVAGLTKLLANEWA 171
Query: 552 SENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDAS 611
++ I VN +APG +T AL ++ + +P GR +++ G FL S A
Sbjct: 172 AKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAVFLSSAAAD 231
Query: 612 YITGEVIVAAGGMQSR 627
Y+ G ++ GG +R
Sbjct: 232 YVHGAILNVDGGWLAR 247
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 96/192 (50%), Gaps = 14/192 (7%)
Query: 6 NASRLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKIS 65
N L G+ A+VT ++ G+G AIA L+A GA VV ++R+ ++ ++ + K+G S
Sbjct: 3 NPFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDGGNA-S 59
Query: 66 GVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKS 125
++ A + F A G DILV+NA + VE E WD++ +VN+K+
Sbjct: 60 ALLIDFADPLAAKDSFTDA-----GFDILVNNAGI-IRRADSVEFSELDWDEVMDVNLKA 113
Query: 126 TFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFK---LLGAYSVSKTALLGLTKAVAQDLA 182
F TQ + + L F+ + +Y+ +K + GLTK +A + A
Sbjct: 114 LFFTTQAFAKELLAKG--RSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTKLLANEWA 171
Query: 183 SENIRVNCLAPG 194
++ I VN +APG
Sbjct: 172 AKGINVNAIAPG 183
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 5/56 (8%)
Query: 694 GIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQ----EVLPYMRKKK 745
G DILV+NA + + VE SE+ WD++ DVNLK+ F TQ E+L R K
Sbjct: 79 GFDILVNNAGIIRRADS-VEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGK 133
Score = 36.2 bits (82), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%)
Query: 640 AYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTK 677
+Y+ +K + GLTK++A + A + I VN +APG I T
Sbjct: 151 SYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETN 188
>pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6
pdb|2AG5|B Chain B, Crystal Structure Of Human Dhrs6
pdb|2AG5|C Chain C, Crystal Structure Of Human Dhrs6
pdb|2AG5|D Chain D, Crystal Structure Of Human Dhrs6
Length = 246
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 120/251 (47%), Gaps = 16/251 (6%)
Query: 378 RLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVV 437
RL GKV ++TA++ GIG A A + EGA V+ + ES + + E + I V
Sbjct: 3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQEL------EKYPGIQTRV 56
Query: 438 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 497
V KK+ + E+ +D+L N A G V++C E WD +NV+S +L
Sbjct: 57 LDVTKKKQIDQFANEVER----LDVLF-NVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYL 111
Query: 498 LTQEVLP-YIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 556
+ + LP + +++ + YS +K A++GLTK+VA D + IR
Sbjct: 112 MIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIR 171
Query: 557 VNCLAPGITKT----KFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASY 612
NC+ PG T + A EEA + GR A +E+ + +L SD+++Y
Sbjct: 172 CNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAY 231
Query: 613 ITGEVIVAAGG 623
+TG ++ GG
Sbjct: 232 VTGNPVIIDGG 242
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 91/187 (48%), Gaps = 12/187 (6%)
Query: 9 RLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVV 68
RL GKV ++TA++ GIG A A + EGA V+ + ES + + E + I V
Sbjct: 3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQEL------EKYPGIQTRV 56
Query: 69 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 128
V KK+ + E+ +D+L N A G V++C E WD +NV+S +L
Sbjct: 57 LDVTKKKQIDQFANEVER----LDVLF-NVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYL 111
Query: 129 LTQEVLP-YIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 187
+ + LP + +++ + YS +K A++GLTK+VA D + IR
Sbjct: 112 MIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIR 171
Query: 188 VNCLAPG 194
NC+ PG
Sbjct: 172 CNCVCPG 178
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 23/36 (63%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
YS +K A+ GLTK VA D + IR NC+ PG + T
Sbjct: 147 YSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDT 182
>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain
Dehydrogenase From Mycobacterium Paratuberculosis
pdb|3TJR|B Chain B, Crystal Structure Of A Rv0851c Ortholog Short Chain
Dehydrogenase From Mycobacterium Paratuberculosis
Length = 301
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 118/248 (47%), Gaps = 13/248 (5%)
Query: 377 SRLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGV 436
S G+ AVVT + GIG A A + GA +V+S + + +AV L+ +G GV
Sbjct: 27 SGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDA-HGV 85
Query: 437 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 496
VC V ++ +L + A + GG+D++ SNA + A GP+ + + W + ++++ +
Sbjct: 86 VCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVA-GPLAQMNHDDWRWVIDIDLWGSI 144
Query: 497 LLTQEVLPYIRKRNXXXXXX-XXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 555
+ LP + ++ L P LG Y V+K ++GL + +A+++ I
Sbjct: 145 HAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGI 204
Query: 556 RVNCLAPGITKTKFAAALYETEEAHEIAVSNVP---MGRLAVPDEMGGIVAFLCSDDASY 612
V+ L P + +TK + E + +S P G L DE + +DD +
Sbjct: 205 GVSVLCPMVVETKLVSN-SERIRGADYGMSATPEGAFGPLPTQDES------VSADDVAR 257
Query: 613 ITGEVIVA 620
+T + I+A
Sbjct: 258 LTADAILA 265
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 93/187 (49%), Gaps = 3/187 (1%)
Query: 8 SRLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGV 67
S G+ AVVT + GIG A A + GA +V+S + + +AV L+ +G GV
Sbjct: 27 SGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDA-HGV 85
Query: 68 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 127
VC V ++ +L + A + GG+D++ SNA + A GP+ + + W + ++++ +
Sbjct: 86 VCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVA-GPLAQMNHDDWRWVIDIDLWGSI 144
Query: 128 LLTQEVLPYIRKRNXXXXXX-XXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 186
+ LP + ++ L P LG Y V+K ++GL + +A+++ I
Sbjct: 145 HAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGI 204
Query: 187 RVNCLAP 193
V+ L P
Sbjct: 205 GVSVLCP 211
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 690 KLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKK 744
+L GG+D++ SNA + A PL + + W + D++L S + LP + ++
Sbjct: 104 RLLGGVDVVFSNAGIVVAG-PLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQ 157
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 638 IGAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
+G Y V+K + GL + +A ++ P I V+ L P ++ TK
Sbjct: 178 LGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKL 218
>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase
Or Reductase From Mycobacterium Abscessus
pdb|3RIH|B Chain B, Crystal Structure Of A Putative Short Chain Dehydrogenase
Or Reductase From Mycobacterium Abscessus
pdb|3RIH|C Chain C, Crystal Structure Of A Putative Short Chain Dehydrogenase
Or Reductase From Mycobacterium Abscessus
pdb|3RIH|D Chain D, Crystal Structure Of A Putative Short Chain Dehydrogenase
Or Reductase From Mycobacterium Abscessus
Length = 293
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 110/247 (44%), Gaps = 6/247 (2%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L+ + +VT + GIG IA + GA+V +++R ++ L + G + GV
Sbjct: 39 LSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRL 98
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
V+ FG +D++ +NA + P PE + ++ +VNVK T
Sbjct: 99 DVSDPGSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQL-SEVLDVNVKGTVYT 157
Query: 499 TQEVL-PYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 557
Q L P + + Y SK A LG + A +LA + V
Sbjct: 158 VQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGVTV 217
Query: 558 NCLAPGITKTKFAAALYETEEAHEIAVS-NVPMGRLAVPDEMGGIVAFLCSDDASYITGE 616
N + PG T+ L + E + ++ ++PMG L P ++G + AFL +D+A YITG+
Sbjct: 218 NAILPGNILTE---GLVDMGEEYISGMARSIPMGMLGSPVDIGHLAAFLATDEAGYITGQ 274
Query: 617 VIVAAGG 623
IV GG
Sbjct: 275 AIVVDGG 281
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 75/186 (40%), Gaps = 2/186 (1%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L+ + +VT + GIG IA + GA+V +++R ++ L + G + GV
Sbjct: 39 LSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRL 98
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
V+ FG +D++ +NA + P PE + ++ +VNVK T
Sbjct: 99 DVSDPGSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQL-SEVLDVNVKGTVYT 157
Query: 130 TQEVL-PYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 188
Q L P + + Y SK A LG + A +LA + V
Sbjct: 158 VQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGVTV 217
Query: 189 NCLAPG 194
N + PG
Sbjct: 218 NAILPG 223
Score = 32.7 bits (73), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTK 677
Y SK A G + A +LAP + VN + PG I T+
Sbjct: 192 YGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTE 228
>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R.
Sphaeroides
pdb|1K2W|B Chain B, Crystal Structure Of Sorbitol Dehydrogenase From R.
Sphaeroides
Length = 256
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 117/259 (45%), Gaps = 21/259 (8%)
Query: 378 RLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVV 437
RL GK A++T S+ GIG A A+ EGA V I+ + N+ A T + G + +
Sbjct: 2 RLDGKTALITGSARGIGRAFAEAYVREGARVAIA---DINLEAARATAAEIGPAACA-IA 57
Query: 438 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 497
V + + ++G IDILV+NAA+ P+VE +D++F +NV T
Sbjct: 58 LDVTDQASIDRCVAELLDRWGSIDILVNNAALFD-LAPIVEITRESYDRLFAINVSGTLF 116
Query: 498 LTQEVL-PYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 556
+ Q V I L+G Y +K A++ LT++ +L I
Sbjct: 117 MMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGIN 176
Query: 557 VNCLAPGI--------TKTKFAAALYET----EEAHEIAVSNVPMGRLAVPDEMGGIVAF 604
VN +APG+ KFA YE E+ ++ + VP GR+ +++ G+ F
Sbjct: 177 VNAIAPGVVDGEHWDGVDAKFAD--YENLPRGEKKRQVGAA-VPFGRMGRAEDLTGMAIF 233
Query: 605 LCSDDASYITGEVIVAAGG 623
L + +A YI + GG
Sbjct: 234 LATPEADYIVAQTYNVDGG 252
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 87/188 (46%), Gaps = 6/188 (3%)
Query: 9 RLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVV 68
RL GK A++T S+ GIG A A+ EGA V I+ + N+ A T + G + +
Sbjct: 2 RLDGKTALITGSARGIGRAFAEAYVREGARVAIA---DINLEAARATAAEIGPAACA-IA 57
Query: 69 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 128
V + + ++G IDILV+NAA+ P+VE +D++F +NV T
Sbjct: 58 LDVTDQASIDRCVAELLDRWGSIDILVNNAALFD-LAPIVEITRESYDRLFAINVSGTLF 116
Query: 129 LTQEVL-PYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 187
+ Q V I L+G Y +K A++ LT++ +L I
Sbjct: 117 MMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGIN 176
Query: 188 VNCLAPGI 195
VN +APG+
Sbjct: 177 VNAIAPGV 184
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 680 DRMIAMLSTDKLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLP 739
DR +A L D+ +G IDILV+NAA+ P+VE + +D++F +N+ + + Q V
Sbjct: 67 DRCVAEL-LDR-WGSIDILVNNAALFDL-APIVEITRESYDRLFAINVSGTLFMMQAVAR 123
Query: 740 YM 741
M
Sbjct: 124 AM 125
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 637 FIGAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLI 674
+G Y +K A+ LT+ +L I VN +APG++
Sbjct: 148 LVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVV 185
>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|B Chain B, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|C Chain C, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|D Chain D, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|E Chain E, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|F Chain F, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|G Chain G, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|H Chain H, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|I Chain I, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|J Chain J, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|K Chain K, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|L Chain L, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|M Chain M, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|N Chain N, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|O Chain O, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|P Chain P, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
Length = 270
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 114/228 (50%), Gaps = 17/228 (7%)
Query: 405 GASVVISSRKESNVNKAVETLQKEGHQKISG---VVCHVAKKEDRQKLFEHAEKKFGGID 461
GA VVI + ES +A+E Q++ G ++C V +++D + L ++FG +D
Sbjct: 33 GARVVICDKDESG-GRALE-------QELPGAVFILCDVTQEDDVKTLVSETIRRFGRLD 84
Query: 462 ILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXX 521
+V+NA +P E + ++ E+N+ T+ LT+ LPY+RK
Sbjct: 85 CVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVG 144
Query: 522 XLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCLAPGITKT----KFAAALYETE 577
+ + + Y +K A+ +TKA+A D + +RVNC++PG T + AA + +
Sbjct: 145 AIGQAQAV-PYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPR 203
Query: 578 EAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVIVAAGGMQ 625
+ + P+GR+ P E+G FL S +A++ TG ++ GG +
Sbjct: 204 ASIREGMLAQPLGRMGQPAEVGAAAVFLAS-EANFCTGIELLVTGGAE 250
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 83/162 (51%), Gaps = 12/162 (7%)
Query: 36 GASVVISSRKESNVNKAVETLQKEGHQKISG---VVCHVAKKEDRQKLFEHAEKKFGGID 92
GA VVI + ES +A+E Q++ G ++C V +++D + L ++FG +D
Sbjct: 33 GARVVICDKDESG-GRALE-------QELPGAVFILCDVTQEDDVKTLVSETIRRFGRLD 84
Query: 93 ILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXX 152
+V+NA +P E + ++ E+N+ T+ LT+ LPY+RK
Sbjct: 85 CVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVG 144
Query: 153 XLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCLAPG 194
+ + + Y +K A+ +TKA+A D + +RVNC++PG
Sbjct: 145 AIGQAQAV-PYVATKGAVTAMTKALALDESPYGVRVNCISPG 185
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 35/58 (60%)
Query: 688 TDKLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKKK 745
T + +G +D +V+NA +P + E S + ++ ++NL ++ LT+ LPY+RK +
Sbjct: 76 TIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ 133
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGDRMIAML 686
Y +K A+ +TK +A D +P +RVNC++PG I T + + A++
Sbjct: 154 YVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALM 199
>pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|B Chain B, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|C Chain C, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|D Chain D, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|E Chain E, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|F Chain F, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|G Chain G, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|H Chain H, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
Length = 266
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 121/247 (48%), Gaps = 2/247 (0%)
Query: 378 RLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVV 437
RL GK A++T ++ GIG IA+ + GA +V+S R S ++ A L ++ + V
Sbjct: 17 RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVA 76
Query: 438 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 497
+A+ + +L A + FGG+D+LV+NA ++ PVV+ ++D VN+++ L
Sbjct: 77 IDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQ-PVVDTDPQLFDATIAVNLRAPAL 135
Query: 498 LTQEV-LPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 556
L V + LAP AY SK L+ TK +A++L IR
Sbjct: 136 LASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPHGIR 195
Query: 557 VNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGE 616
N + P + T+ ++ E ++ +P+GR AVP E+ V +L SD AS I G
Sbjct: 196 ANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWLASDAASMINGV 255
Query: 617 VIVAAGG 623
I GG
Sbjct: 256 DIPVDGG 262
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 92/186 (49%), Gaps = 2/186 (1%)
Query: 9 RLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVV 68
RL GK A++T ++ GIG IA+ +A GA +V+S R S ++ A L ++ + V
Sbjct: 17 RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVA 76
Query: 69 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 128
+A+ + +L A + FGG+D+LV+NA ++ PVV+ ++D VN+++ L
Sbjct: 77 IDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQ-PVVDTDPQLFDATIAVNLRAPAL 135
Query: 129 LTQEV-LPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 187
L V + LAP AY SK L+ TK +A++L IR
Sbjct: 136 LASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPHGIR 195
Query: 188 VNCLAP 193
N + P
Sbjct: 196 ANSVCP 201
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 640 AYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGDRM 682
AY SK L TKV+A +L P IR N + P ++ T+ G R+
Sbjct: 170 AYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRV 212
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 692 YGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEV 737
+GG+D+LV+NA ++ +P+V+ ++D VNL++ LL V
Sbjct: 96 FGGLDVLVNNAGIS-HPQPVVDTDPQLFDATIAVNLRAPALLASAV 140
>pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For
Alginate Metabolism
pdb|3AFM|B Chain B, Crystal Structure Of Aldose Reductase A1-R Responsible For
Alginate Metabolism
pdb|3AFN|B Chain B, Crystal Structure Of Aldose Reductase A1-R Complexed With
Nadp
pdb|3AFN|A Chain A, Crystal Structure Of Aldose Reductase A1-R Complexed With
Nadp
pdb|3AFN|C Chain C, Crystal Structure Of Aldose Reductase A1-R Complexed With
Nadp
pdb|3AFN|D Chain D, Crystal Structure Of Aldose Reductase A1-R Complexed With
Nadp
Length = 258
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 116/253 (45%), Gaps = 11/253 (4%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKE-SNVNKAVETLQKEGHQKISGVV 437
L GK ++T SS GIG A A+ + GA V + RK +N+++ + +++ +G
Sbjct: 5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAF-FA 63
Query: 438 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 497
+A E Q+L + KFGGID+L++NA P+ E + +D + + N++S +
Sbjct: 64 ADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVM 123
Query: 498 LTQEVLPYI------RKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLA 551
T+ LP++ + G Y +K L + K
Sbjct: 124 TTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVDFHT 183
Query: 552 SENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDAS 611
+ +R N ++PG T F A +T++ + + +PMGR +EM F S AS
Sbjct: 184 KDGVRFNIVSPGTVDTAFHAD--KTQDVRDRISNGIPMGRFGTAEEMAPAFLFFASHLAS 241
Query: 612 -YITGEVIVAAGG 623
YITG+V+ GG
Sbjct: 242 GYITGQVLDINGG 254
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 70/129 (54%), Gaps = 2/129 (1%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKE-SNVNKAVETLQKEGHQKISGVV 68
L GK ++T SS GIG A A+ + GA V + RK +N+++ + +++ +G
Sbjct: 5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAF-FA 63
Query: 69 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 128
+A E Q+L + KFGGID+L++NA P+ E + +D + + N++S +
Sbjct: 64 ADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVM 123
Query: 129 LTQEVLPYI 137
T+ LP++
Sbjct: 124 TTKFALPHL 132
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 692 YGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYM 741
+GGID+L++NA +PL E + +D + D N++S + T+ LP++
Sbjct: 83 FGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHL 132
>pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase
From Escherichia Coli Cft073
pdb|3F5Q|B Chain B, Crystal Structure Of Putative Short Chain Dehydrogenase
From Escherichia Coli Cft073
pdb|3GZ4|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase
From Escherichia Coli Cft073 Complexed With Nadph
pdb|3GZ4|B Chain B, Crystal Structure Of Putative Short Chain Dehydrogenase
From Escherichia Coli Cft073 Complexed With Nadph
Length = 262
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 114/247 (46%), Gaps = 13/247 (5%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L ++ +VT +SDGIG A + GA+V++ R E + + + +E ++ +
Sbjct: 12 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 71
Query: 439 HV--AKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 496
+ ED Q+L + + +D ++ NA + P+ E VW + +VNV +TF
Sbjct: 72 DLLTCTSEDCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQDPQVWQDVMQVNVNATF 131
Query: 497 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 556
+LTQ +LP + K + GAY+ SK A G+ + +A D + +R
Sbjct: 132 MLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLA-DEYQQRLR 190
Query: 557 VNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGE 616
VNC+ PG T+T A+ + TE+ +L P ++ + +L DD+ TG
Sbjct: 191 VNCINPGGTRTAMRASAFPTEDPQ----------KLKTPADIMPLYLWLMGDDSRRKTGM 240
Query: 617 VIVAAGG 623
A G
Sbjct: 241 TFDAQPG 247
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 3/187 (1%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L ++ +VT +SDGIG A + GA+V++ R E + + + +E ++ +
Sbjct: 12 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 71
Query: 70 HV--AKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 127
+ ED Q+L + + +D ++ NA + P+ E VW + +VNV +TF
Sbjct: 72 DLLTCTSEDCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQDPQVWQDVMQVNVNATF 131
Query: 128 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 187
+LTQ +LP + K + GAY+ SK A G+ + +A D + +R
Sbjct: 132 MLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLA-DEYQQRLR 190
Query: 188 VNCLAPG 194
VNC+ PG
Sbjct: 191 VNCINPG 197
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 639 GAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
GAY+ SK A G+ +V+A++ + +RVNC+ PG RT
Sbjct: 165 GAYAASKFATEGMMQVLADEYQ-QRLRVNCINPGGTRT 201
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 692 YGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQ 735
Y +D ++ NA + P+ E VW + VN+ ++F+LTQ
Sbjct: 92 YPRLDGVLHNAGLLGDVCPMSEQDPQVWQDVMQVNVNATFMLTQ 135
>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From
Mycobacterium Tuberculosis
pdb|1NFF|B Chain B, Crystal Structure Of Rv2002 Gene Product From
Mycobacterium Tuberculosis
pdb|1NFQ|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFQ|B Chain B, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFQ|C Chain C, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFQ|D Chain D, Rv2002 Gene Product From Mycobacterium Tuberculosis
Length = 260
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 116/260 (44%), Gaps = 26/260 (10%)
Query: 376 ASRLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISG 435
+ RL GKVA+V+ + G+G + + + EGA VV + L +EG +
Sbjct: 2 SGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFG-----------DILDEEGKAMAAE 50
Query: 436 -------VVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIF 488
V V + + + A FGG+ +LV+NA + G + + W +I
Sbjct: 51 LADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGI-LNIGTIEDYALTEWQRIL 109
Query: 489 EVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQ 548
+VN+ FL + V+ +++ LA Y+ +K A+ GLTK+ A
Sbjct: 110 DVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTAL 169
Query: 549 DLASENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSD 608
+L IRVN + PG+ KT + E + +GR A P E+ +V +L SD
Sbjct: 170 ELGPSGIRVNSIHPGLVKTPMTDWVPED-------IFQTALGRAAEPVEVSNLVVYLASD 222
Query: 609 DASYITGEVIVAAGGMQSRL 628
++SY TG V GG + L
Sbjct: 223 ESSYSTGAEFVVDGGTVAGL 242
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 19/196 (9%)
Query: 7 ASRLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISG 66
+ RLTGKVA+V+ + G+G + + + AEGA VV + L +EG +
Sbjct: 2 SGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFG-----------DILDEEGKAMAAE 50
Query: 67 -------VVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIF 119
V V + + + A FGG+ +LV+NA + G + + W +I
Sbjct: 51 LADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGI-LNIGTIEDYALTEWQRIL 109
Query: 120 EVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQ 179
+VN+ FL + V+ +++ LA Y+ +K A+ GLTK+ A
Sbjct: 110 DVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTAL 169
Query: 180 DLASENIRVNCLAPGI 195
+L IRVN + PG+
Sbjct: 170 ELGPSGIRVNSIHPGL 185
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 640 AYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGD 680
Y+ +K A+ GLTK A +L P IRVN + PGL++T D
Sbjct: 152 GYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD 192
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 692 YGGIDILVSNAAVNPANEPLVECSEVV-WDKIFDVNLKSSFLLTQEVLPYMRK 743
+GG+ +LV+NA + N +E + W +I DVNL FL + V+ M++
Sbjct: 79 FGGLHVLVNNAGI--LNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKE 129
>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus
Thermophilus Tt0137
pdb|2A4K|B Chain B, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus
Thermophilus Tt0137
Length = 263
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 116/247 (46%), Gaps = 10/247 (4%)
Query: 377 SRLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGV 436
RL+GK +VT ++ GIG A + EGAS+V R+E + + + V
Sbjct: 2 GRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREE----RLLAEAVAALEAEAIAV 57
Query: 437 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 496
V V+ + + +F A ++FG + + A V + P W+K+ VN+ +F
Sbjct: 58 VADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAH-SALSWNLPLEAWEKVLRVNLTGSF 116
Query: 497 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 556
L+ ++ + + L F L Y+ K ++GL + +A +LA + +R
Sbjct: 117 LVARKAGEVLEEGG--SLVLTGSVAGLGAFG-LAHYAAGKLGVVGLARTLALELARKGVR 173
Query: 557 VNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGE 616
VN L PG+ +T A L E+ S P+GR P+E+ FL S++++YITG+
Sbjct: 174 VNVLLPGLIQTPMTAGLPPWAWEQEVGAS--PLGRAGRPEEVAQAALFLLSEESAYITGQ 231
Query: 617 VIVAAGG 623
+ GG
Sbjct: 232 ALYVDGG 238
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 86/188 (45%), Gaps = 8/188 (4%)
Query: 8 SRLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGV 67
RL+GK +VT ++ GIG A + EGAS+V R+E + + + V
Sbjct: 2 GRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREE----RLLAEAVAALEAEAIAV 57
Query: 68 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 127
V V+ + + +F A ++FG + + A V + P W+K+ VN+ +F
Sbjct: 58 VADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAH-SALSWNLPLEAWEKVLRVNLTGSF 116
Query: 128 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 187
L+ ++ + + L F L Y+ K ++GL + +A +LA + +R
Sbjct: 117 LVARKAGEVLEEGG--SLVLTGSVAGLGAFG-LAHYAAGKLGVVGLARTLALELARKGVR 173
Query: 188 VNCLAPGI 195
VN L PG+
Sbjct: 174 VNVLLPGL 181
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
Y+ K + GL + +A +LA + +RVN L PGLI+T
Sbjct: 149 YAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQT 184
>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida
Parapsilosis With Anti-Prelog Stereo-Specificity
pdb|3CTM|B Chain B, Crystal Structure Of A Carbonyl Reductase From Candida
Parapsilosis With Anti-Prelog Stereo-Specificity
pdb|3CTM|C Chain C, Crystal Structure Of A Carbonyl Reductase From Candida
Parapsilosis With Anti-Prelog Stereo-Specificity
pdb|3CTM|D Chain D, Crystal Structure Of A Carbonyl Reductase From Candida
Parapsilosis With Anti-Prelog Stereo-Specificity
pdb|3CTM|E Chain E, Crystal Structure Of A Carbonyl Reductase From Candida
Parapsilosis With Anti-Prelog Stereo-Specificity
pdb|3CTM|F Chain F, Crystal Structure Of A Carbonyl Reductase From Candida
Parapsilosis With Anti-Prelog Stereo-Specificity
pdb|3CTM|G Chain G, Crystal Structure Of A Carbonyl Reductase From Candida
Parapsilosis With Anti-Prelog Stereo-Specificity
pdb|3CTM|H Chain H, Crystal Structure Of A Carbonyl Reductase From Candida
Parapsilosis With Anti-Prelog Stereo-Specificity
Length = 279
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 114/248 (45%), Gaps = 7/248 (2%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L GKVA VT SS GIG+A+A+ + GA V I KA E LQK C
Sbjct: 32 LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKA-EHLQKTYGVHSKAYKC 90
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPE-NVWDKIFEVNVKSTFL 497
+++ + ++ EK FG ID+ V+NA V GP ++ + W+KI V++ +
Sbjct: 91 NISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYY 150
Query: 498 LTQEVLPYIRK--RNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 555
+ + +K + + +L Y+ +K A L K++A + A
Sbjct: 151 CSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWA-PFA 209
Query: 556 RVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITG 615
RVN ++PG T + +A ++ P+GR + E+ G +L S+ +++ TG
Sbjct: 210 RVNTISPGYIDTDITDFASKDMKAKWWQLT--PLGREGLTQELVGGYLYLASNASTFTTG 267
Query: 616 EVIVAAGG 623
+V GG
Sbjct: 268 SDVVIDGG 275
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 5/188 (2%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L GKVA VT SS GIG+A+A+ + GA V I KA E LQK C
Sbjct: 32 LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKA-EHLQKTYGVHSKAYKC 90
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPE-NVWDKIFEVNVKSTFL 128
+++ + ++ EK FG ID+ V+NA V GP ++ + W+KI V++ +
Sbjct: 91 NISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYY 150
Query: 129 LTQEVLPYIRK--RNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 186
+ + +K + + +L Y+ +K A L K++A + A
Sbjct: 151 CSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWA-PFA 209
Query: 187 RVNCLAPG 194
RVN ++PG
Sbjct: 210 RVNTISPG 217
>pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy
Benzoate Dehydrogenase
Length = 250
Score = 87.4 bits (215), Expect = 3e-17, Method: Composition-based stats.
Identities = 71/253 (28%), Positives = 109/253 (43%), Gaps = 20/253 (7%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
+GK VT + GIG+A A GA V + ++A Q ++ V
Sbjct: 5 FSGKNVWVTGAGKGIGYATALAFVEAGAKV-------TGFDQAFTQEQYPFATEVMDVAD 57
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
+ Q+L E+ +D LV NAA G + + W + F VNV F L
Sbjct: 58 AAQVAQVCQRLLAETER----LDALV-NAAGILRMGATDQLSKEDWQQTFAVNVGGAFNL 112
Query: 499 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 558
Q+ + R++ P + AY SK AL L +V +LA +R N
Sbjct: 113 FQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRCN 172
Query: 559 CLAPGITKTKFAAALYETEEAHEIAVS--------NVPMGRLAVPDEMGGIVAFLCSDDA 610
++PG T T L+ +++A E + +P+G++A P E+ + FL SD A
Sbjct: 173 VVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDLA 232
Query: 611 SYITGEVIVAAGG 623
S+IT + IV GG
Sbjct: 233 SHITLQDIVVDGG 245
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 49/185 (26%), Positives = 74/185 (40%), Gaps = 12/185 (6%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
+GK VT + GIG+A A GA V + ++A Q ++ V
Sbjct: 5 FSGKNVWVTGAGKGIGYATALAFVEAGAKV-------TGFDQAFTQEQYPFATEVMDVAD 57
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
+ Q+L E+ +D LV NAA G + + W + F VNV F L
Sbjct: 58 AAQVAQVCQRLLAETER----LDALV-NAAGILRMGATDQLSKEDWQQTFAVNVGGAFNL 112
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
Q+ + R++ P + AY SK AL L +V +LA +R N
Sbjct: 113 FQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRCN 172
Query: 190 CLAPG 194
++PG
Sbjct: 173 VVSPG 177
>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
pdb|1XG5|B Chain B, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
pdb|1XG5|C Chain C, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
pdb|1XG5|D Chain D, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
Length = 279
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 120/248 (48%), Gaps = 12/248 (4%)
Query: 378 RLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGH-QKISGV 436
R ++A+VT +S GIG A+A+ L +G VV +R N+ + + G+ +
Sbjct: 29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPY 88
Query: 437 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAV-NPATGPVVECPENVWDKIFEVNVKST 495
C ++ +ED +F + G+DI ++NA + P T ++ + W +F VNV +
Sbjct: 89 RCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDT--LLSGSTSGWKDMFNVNVLAL 146
Query: 496 FLLTQEVLPYIRKRNXXXXX----XXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDL- 550
+ T+E +++RN + P + YS +K A+ LT+ + Q+L
Sbjct: 147 SICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELR 206
Query: 551 -ASENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDD 609
A +IR C++PG+ +T+FA L++ + E A + + P+++ V ++ S
Sbjct: 207 EAQTHIRATCISPGVVETQFAFKLHDKDP--EKAAATYEQMKCLKPEDVAEAVIYVLSTP 264
Query: 610 ASYITGEV 617
A G++
Sbjct: 265 AHIQIGDI 272
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 95/195 (48%), Gaps = 10/195 (5%)
Query: 9 RLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGH-QKISGV 67
R ++A+VT +S GIG A+A+ L +G VV +R N+ + + G+ +
Sbjct: 29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPY 88
Query: 68 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAV-NPATGPVVECPENVWDKIFEVNVKST 126
C ++ +ED +F + G+DI ++NA + P T ++ + W +F VNV +
Sbjct: 89 RCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDT--LLSGSTSGWKDMFNVNVLAL 146
Query: 127 FLLTQEVLPYIRKRNXXXXX----XXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDL- 181
+ T+E +++RN + P + YS +K A+ LT+ + Q+L
Sbjct: 147 SICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELR 206
Query: 182 -ASENIRVNCLAPGI 195
A +IR C++PG+
Sbjct: 207 EAQTHIRATCISPGV 221
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Query: 641 YSVSKTALFGLTKVVAEDL--APENIRVNCLAPGLIRTKF 678
YS +K A+ LT+ + ++L A +IR C++PG++ T+F
Sbjct: 187 YSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQF 226
>pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase
From Shigella Flexneri 2a Str. 301
pdb|3F5S|B Chain B, Crystal Structure Of Putatitve Short Chain Dehydrogenase
From Shigella Flexneri 2a Str. 301
pdb|3GY0|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase
From Shigella Flexneri 2a Str. 301 Complexed With Nadp
Length = 255
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 114/247 (46%), Gaps = 13/247 (5%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L ++ +VT +SDGIG A + GA+V++ R E + + + +E ++ +
Sbjct: 8 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 67
Query: 439 HV--AKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 496
+ E+ Q+L + + +D ++ NA + P+ E VW + ++NV +TF
Sbjct: 68 DLLTCTSENCQQLAQRIVVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQINVNATF 127
Query: 497 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 556
+LTQ +LP + K + GAY+ SK A G+ + +A D + +R
Sbjct: 128 MLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLA-DEYQQRLR 186
Query: 557 VNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGE 616
VNC+ PG T+T A+ + TE+ +L P ++ + +L DD+ TG
Sbjct: 187 VNCINPGGTRTAMRASAFPTEDPQ----------KLKTPADIMPLYLWLMGDDSRRKTGM 236
Query: 617 VIVAAGG 623
A G
Sbjct: 237 TFDAQPG 243
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 3/187 (1%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L ++ +VT +SDGIG A + GA+V++ R E + + + +E ++ +
Sbjct: 8 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 67
Query: 70 HV--AKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 127
+ E+ Q+L + + +D ++ NA + P+ E VW + ++NV +TF
Sbjct: 68 DLLTCTSENCQQLAQRIVVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQINVNATF 127
Query: 128 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 187
+LTQ +LP + K + GAY+ SK A G+ + +A D + +R
Sbjct: 128 MLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLA-DEYQQRLR 186
Query: 188 VNCLAPG 194
VNC+ PG
Sbjct: 187 VNCINPG 193
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 639 GAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
GAY+ SK A G+ +V+A++ + +RVNC+ PG RT
Sbjct: 161 GAYAASKFATEGMMQVLADEYQ-QRLRVNCINPGGTRT 197
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 692 YGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQ 735
Y +D ++ NA + P+ E + VW + +N+ ++F+LTQ
Sbjct: 88 YPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQINVNATFMLTQ 131
>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
Length = 256
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 122/254 (48%), Gaps = 17/254 (6%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
++ ++A VT GIG +I +RL +G VV N + V+ L+ QK G
Sbjct: 11 MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGC--GPNSPRRVKWLED---QKALGFDF 65
Query: 439 H-----VAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVV--ECPENVWDKIFEVN 491
+ V + ++ F+ + + G ID+LV+NA + T VV + W + + N
Sbjct: 66 YASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGI---TRDVVFRKMTREDWQAVIDTN 122
Query: 492 VKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLA 551
+ S F +T++V+ + +R YS +K + G T ++AQ++A
Sbjct: 123 LTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVA 182
Query: 552 SENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDAS 611
++ + VN ++PG T A+ + E V+ +P+ RL PDE+G IVA+L S+++
Sbjct: 183 TKGVTVNTVSPGYIGTDMVKAIRP--DVLEKIVATIPVRRLGSPDEIGSIVAWLASEESG 240
Query: 612 YITGEVIVAAGGMQ 625
+ TG GG+
Sbjct: 241 FSTGADFSLNGGLH 254
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 90/192 (46%), Gaps = 15/192 (7%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
++ ++A VT GIG +I +RL +G VV N + V+ L+ QK G
Sbjct: 11 MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGC--GPNSPRRVKWLED---QKALGFDF 65
Query: 70 H-----VAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVV--ECPENVWDKIFEVN 122
+ V + ++ F+ + + G ID+LV+NA + T VV + W + + N
Sbjct: 66 YASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGI---TRDVVFRKMTREDWQAVIDTN 122
Query: 123 VKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLA 182
+ S F +T++V+ + +R YS +K + G T ++AQ++A
Sbjct: 123 LTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVA 182
Query: 183 SENIRVNCLAPG 194
++ + VN ++PG
Sbjct: 183 TKGVTVNTVSPG 194
Score = 32.7 bits (73), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
YS +K + G T +A+++A + + VN ++PG I T
Sbjct: 163 YSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDM 200
>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
pdb|3OEC|B Chain B, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
pdb|3OEC|C Chain C, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
pdb|3OEC|D Chain D, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
Length = 317
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 134/297 (45%), Gaps = 42/297 (14%)
Query: 364 STSTKIMSTAVNASRLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISS--RKESNVNKA 421
ST +RL GKVA +T ++ G G A RL+ +GA +V R++ N++ A
Sbjct: 29 STRVSARGQGARMNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYA 88
Query: 422 ----------VETLQKEGHQKISGVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNP 471
V ++++G ++I V Q + + A +FG IDILVSN ++
Sbjct: 89 QGSPEELKETVRLVEEQG-RRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGIS- 146
Query: 472 ATGPVVECPENVWDKIFEVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGA 531
G VV + W I + N+ + + VLP + +R + L GA
Sbjct: 147 NQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVS----STVGLRGA 202
Query: 532 -----YSVSKTALLGLTKAVAQDLASENIRVNCLAPGITKTKFAAALYE----------- 575
Y+ SK + GL ++A ++ NIRVN + PG T+ AL E
Sbjct: 203 PGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEM--ALNEKLLKMFLPHLE 260
Query: 576 ---TEEAHEI--AVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVIVAAGGMQSR 627
E+A E+ ++ +P+ + P+++ VA+L SD+A YI G I GG +R
Sbjct: 261 NPTREDAAELFSQLTLLPIPWVE-PEDVSNAVAWLASDEARYIHGAAIPVDGGQLAR 316
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 96/204 (47%), Gaps = 23/204 (11%)
Query: 8 SRLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISS--RKESNVNKA----------VET 55
+RL GKVA +T ++ G G A RL+ +GA +V R++ N++ A V
Sbjct: 42 NRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRL 101
Query: 56 LQKEGHQKISGVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVW 115
++++G ++I V Q + + A +FG IDILVSN ++ G VV + W
Sbjct: 102 VEEQG-RRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGIS-NQGEVVSLTDQQW 159
Query: 116 DKIFEVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGA-----YSVSKTAL 170
I + N+ + + VLP + +R + L GA Y+ SK +
Sbjct: 160 SDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVS----STVGLRGAPGQSHYAASKHGV 215
Query: 171 LGLTKAVAQDLASENIRVNCLAPG 194
GL ++A ++ NIRVN + PG
Sbjct: 216 QGLMLSLANEVGRHNIRVNSVNPG 239
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 692 YGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYM 741
+G IDILVSN ++ E +V ++ W I NL ++ + VLP M
Sbjct: 133 FGHIDILVSNVGISNQGE-VVSLTDQQWSDILQTNLIGAWHACRAVLPSM 181
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
Y+ SK + GL +A ++ NIRVN + PG + T+
Sbjct: 208 YAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEM 245
>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFR|B Chain B, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFR|C Chain C, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFR|D Chain D, Rv2002 Gene Product From Mycobacterium Tuberculosis
Length = 260
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 113/260 (43%), Gaps = 26/260 (10%)
Query: 376 ASRLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISG 435
+ RL GKVA+V+ + G G + + EGA VV + L +EG +
Sbjct: 2 SGRLTGKVALVSGGARGXGASHVRAXVAEGAKVVFG-----------DILDEEGKAXAAE 50
Query: 436 -------VVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIF 488
V V + + + A FGG+ +LV+NA + G + + W +I
Sbjct: 51 LADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGI-LNIGTIEDYALTEWQRIL 109
Query: 489 EVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQ 548
+VN+ FL + V+ ++ LA Y+ +K A+ GLTK+ A
Sbjct: 110 DVNLTGVFLGIRAVVKPXKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTAL 169
Query: 549 DLASENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSD 608
+L IRVN + PG+ KT + E + +GR A P E+ +V +L SD
Sbjct: 170 ELGPSGIRVNSIHPGLVKTPXTDWVPED-------IFQTALGRAAEPVEVSNLVVYLASD 222
Query: 609 DASYITGEVIVAAGGMQSRL 628
++SY TG V GG + L
Sbjct: 223 ESSYSTGAEFVVDGGTVAGL 242
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 86/196 (43%), Gaps = 19/196 (9%)
Query: 7 ASRLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISG 66
+ RLTGKVA+V+ + G G + + AEGA VV + L +EG +
Sbjct: 2 SGRLTGKVALVSGGARGXGASHVRAXVAEGAKVVFG-----------DILDEEGKAXAAE 50
Query: 67 -------VVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIF 119
V V + + + A FGG+ +LV+NA + G + + W +I
Sbjct: 51 LADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGI-LNIGTIEDYALTEWQRIL 109
Query: 120 EVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQ 179
+VN+ FL + V+ ++ LA Y+ +K A+ GLTK+ A
Sbjct: 110 DVNLTGVFLGIRAVVKPXKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTAL 169
Query: 180 DLASENIRVNCLAPGI 195
+L IRVN + PG+
Sbjct: 170 ELGPSGIRVNSIHPGL 185
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 640 AYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGD 680
Y+ +K A+ GLTK A +L P IRVN + PGL++T D
Sbjct: 152 GYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPXTD 192
>pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol
Dehydrogenase From Cladosporium Herbarum.
pdb|3GDF|B Chain B, Crystal Structure Of The Nadp-Dependent Mannitol
Dehydrogenase From Cladosporium Herbarum.
pdb|3GDF|C Chain C, Crystal Structure Of The Nadp-Dependent Mannitol
Dehydrogenase From Cladosporium Herbarum.
pdb|3GDF|D Chain D, Crystal Structure Of The Nadp-Dependent Mannitol
Dehydrogenase From Cladosporium Herbarum.
pdb|3GDG|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol
Dehydrogenase From Cladosporium Herbarum.
pdb|3GDG|B Chain B, Crystal Structure Of The Nadp-Dependent Mannitol
Dehydrogenase From Cladosporium Herbarum.
pdb|3GDG|C Chain C, Crystal Structure Of The Nadp-Dependent Mannitol
Dehydrogenase From Cladosporium Herbarum.
pdb|3GDG|D Chain D, Crystal Structure Of The Nadp-Dependent Mannitol
Dehydrogenase From Cladosporium Herbarum
Length = 267
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 121/254 (47%), Gaps = 9/254 (3%)
Query: 379 LAGKVAVVTASSD--GIGFAIAKRLSTEGASVVIS-SRKESNVNKAVETLQKEGHQKISG 435
L GKV VVT +S G+G A+ + GA+V I+ + + + V+ L+K K
Sbjct: 18 LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKA 77
Query: 436 VVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKST 495
C V E +KL + FG ID ++NA +G +++ W+ + +V++ T
Sbjct: 78 YKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSG-ILDGSVEAWNHVVQVDLNGT 136
Query: 496 FLLTQEVLPYIRKRNXXXXX-XXXXXXXLAPF-KLLGAYSVSKTALLGLTKAVAQDLASE 553
F + V + ++R +A F + +Y+V+K + + +++A + +
Sbjct: 137 FHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANEW-RD 195
Query: 554 NIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYI 613
RVN ++PG T + + +E ++ S +PMGR + E+ G + SD ++Y
Sbjct: 196 FARVNSISPGYIDTGLSD--FVPKETQQLWHSMIPMGRDGLAKELKGAYVYFASDASTYT 253
Query: 614 TGEVIVAAGGMQSR 627
TG ++ GG +R
Sbjct: 254 TGADLLIDGGYTTR 267
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 90/190 (47%), Gaps = 7/190 (3%)
Query: 10 LTGKVAVVTASSD--GIGFAIAKRLSAEGASVVIS-SRKESNVNKAVETLQKEGHQKISG 66
L GKV VVT +S G+G A+ + GA+V I+ + + + V+ L+K K
Sbjct: 18 LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKA 77
Query: 67 VVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKST 126
C V E +KL + FG ID ++NA +G +++ W+ + +V++ T
Sbjct: 78 YKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSG-ILDGSVEAWNHVVQVDLNGT 136
Query: 127 FLLTQEVLPYIRKRNXXXXX-XXXXXXXLAPF-KLLGAYSVSKTALLGLTKAVAQDLASE 184
F + V + ++R +A F + +Y+V+K + + +++A + +
Sbjct: 137 FHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANEW-RD 195
Query: 185 NIRVNCLAPG 194
RVN ++PG
Sbjct: 196 FARVNSISPG 205
>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad+ And 1,2-Pentandiol
pdb|2WDZ|B Chain B, Crystal Structure Of The Short Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad+ And 1,2-Pentandiol
pdb|2WDZ|C Chain C, Crystal Structure Of The Short Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad+ And 1,2-Pentandiol
pdb|2WDZ|D Chain D, Crystal Structure Of The Short Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad+ And 1,2-Pentandiol
pdb|3LQF|A Chain A, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol- Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad And Erythritol
pdb|3LQF|B Chain B, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol- Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad And Erythritol
pdb|3LQF|C Chain C, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol- Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad And Erythritol
pdb|3LQF|D Chain D, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol- Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad And Erythritol
pdb|2WSB|A Chain A, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad
pdb|2WSB|B Chain B, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad
pdb|2WSB|C Chain C, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad
pdb|2WSB|D Chain D, Crystal Structure Of The Short-Chain Dehydrogenase
Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter
Sphaeroides In Complex With Nad
Length = 254
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 104/248 (41%), Gaps = 7/248 (2%)
Query: 378 RLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVV 437
RL G A VT + GIG I + + GA +++ R+ + +++A + L +I V
Sbjct: 8 RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADV 67
Query: 438 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 497
E + ILV++A + +E + W ++ VNV F
Sbjct: 68 TDAEAMTAAAAEAEAVAP----VSILVNSAGIAR-LHDALETDDATWRQVMAVNVDGMFW 122
Query: 498 LTQEVLPYIRKRNXXXXX--XXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 555
++ + R + + +Y SK A+ LT+A+A + A +
Sbjct: 123 ASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGV 182
Query: 556 RVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITG 615
RVN LAPG T+ + E E E + PMGR P E+ FL S ASY+TG
Sbjct: 183 RVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLASPAASYVTG 242
Query: 616 EVIVAAGG 623
++ GG
Sbjct: 243 AILAVDGG 250
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 78/188 (41%), Gaps = 7/188 (3%)
Query: 9 RLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVV 68
RL G A VT + GIG I + +A GA +++ R+ + +++A + L +I V
Sbjct: 8 RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADV 67
Query: 69 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 128
E + ILV++A + +E + W ++ VNV F
Sbjct: 68 TDAEAMTAAAAEAEAVAP----VSILVNSAGIAR-LHDALETDDATWRQVMAVNVDGMFW 122
Query: 129 LTQEVLPYIRKRNXXXXX--XXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 186
++ + R + + +Y SK A+ LT+A+A + A +
Sbjct: 123 ASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGV 182
Query: 187 RVNCLAPG 194
RVN LAPG
Sbjct: 183 RVNALAPG 190
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 636 RFIGAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGDRM 682
+F +Y SK A+ LT+ +A + A +RVN LAPG + T+ +M
Sbjct: 154 QFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKM 200
>pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From
E.Coli
pdb|3F1L|B Chain B, The 0.95 A Structure Of An Oxidoreductase, Ycik From
E.Coli
Length = 252
Score = 84.7 bits (208), Expect = 2e-16, Method: Composition-based stats.
Identities = 65/254 (25%), Positives = 118/254 (46%), Gaps = 13/254 (5%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L ++ +VT +SDGIG A + GA+V++ R E + + + +E ++ +
Sbjct: 10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 69
Query: 439 HV--AKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 496
+ E+ Q+L + + +D ++ NA + P+ E VW + +VNV +TF
Sbjct: 70 DLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATF 129
Query: 497 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 556
+LTQ +LP + K + GAY+ SK A G+ + +A D + +R
Sbjct: 130 MLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLA-DEYQQRLR 188
Query: 557 VNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGE 616
VNC+ PG T+T A+ + TE+ +L P ++ + +L DD+ TG
Sbjct: 189 VNCINPGGTRTAMRASAFPTEDPQ----------KLKTPADIMPLYLWLMGDDSRRKTGM 238
Query: 617 VIVAAGGMQSRLTK 630
A G + +++
Sbjct: 239 TFDAQPGRKPGISQ 252
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 51/187 (27%), Positives = 90/187 (48%), Gaps = 3/187 (1%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L ++ +VT +SDGIG A + GA+V++ R E + + + +E ++ +
Sbjct: 10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 69
Query: 70 HV--AKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 127
+ E+ Q+L + + +D ++ NA + P+ E VW + +VNV +TF
Sbjct: 70 DLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATF 129
Query: 128 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 187
+LTQ +LP + K + GAY+ SK A G+ + +A D + +R
Sbjct: 130 MLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLA-DEYQQRLR 188
Query: 188 VNCLAPG 194
VNC+ PG
Sbjct: 189 VNCINPG 195
Score = 36.2 bits (82), Expect = 0.080, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 639 GAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGDRMIAMLSTDKLYGGIDIL 698
GAY+ SK A G+ +V+A++ + +RVNC+ PG RT KL DI+
Sbjct: 163 GAYAASKFATEGMMQVLADEYQ-QRLRVNCINPGGTRTAMRASAFPTEDPQKLKTPADIM 221
Score = 29.6 bits (65), Expect = 6.5, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 692 YGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQ 735
Y +D ++ NA + P+ E + VW + VN+ ++F+LTQ
Sbjct: 90 YPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQ 133
>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase
pdb|1IY8|B Chain B, Crystal Structure Of Levodione Reductase
pdb|1IY8|C Chain C, Crystal Structure Of Levodione Reductase
pdb|1IY8|D Chain D, Crystal Structure Of Levodione Reductase
pdb|1IY8|E Chain E, Crystal Structure Of Levodione Reductase
pdb|1IY8|F Chain F, Crystal Structure Of Levodione Reductase
pdb|1IY8|G Chain G, Crystal Structure Of Levodione Reductase
pdb|1IY8|H Chain H, Crystal Structure Of Levodione Reductase
Length = 267
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 116/266 (43%), Gaps = 9/266 (3%)
Query: 369 IMSTAVNASRLAGKVAVVTASSDGIGFAIAKRLSTEGA--SVVISSRKESNVNKAVETLQ 426
+ +T+ +R +V ++T G+G A A RL+ EGA S+V S + +KA L+
Sbjct: 1 MTATSSPTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAA-VLE 59
Query: 427 KEGHQKISGVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDK 486
++ V V+ + + ++FG ID +NA + P +DK
Sbjct: 60 TAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDK 119
Query: 487 IFEVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAV 546
+ +N++ FL ++VL +R++ + Y+ +K ++GLT+
Sbjct: 120 VVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNS 179
Query: 547 AQDLASENIRVNCLAPGITKTKFAAALYET------EEAHEIAVSNVPMGRLAVPDEMGG 600
A + IR+N +APG T + +A E + P R E+
Sbjct: 180 AVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAA 239
Query: 601 IVAFLCSDDASYITGEVIVAAGGMQS 626
+VAFL SDDASY+ V+ GG +
Sbjct: 240 VVAFLLSDDASYVNATVVPIDGGQSA 265
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 90/195 (46%), Gaps = 3/195 (1%)
Query: 2 STAVNASRLTGKVAVVTASSDGIGFAIAKRLSAEGA--SVVISSRKESNVNKAVETLQKE 59
+T+ +R T +V ++T G+G A A RL+AEGA S+V S + +KA L+
Sbjct: 3 ATSSPTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAA-VLETA 61
Query: 60 GHQKISGVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIF 119
++ V V+ + + ++FG ID +NA + P +DK+
Sbjct: 62 PDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVV 121
Query: 120 EVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQ 179
+N++ FL ++VL +R++ + Y+ +K ++GLT+ A
Sbjct: 122 SINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAV 181
Query: 180 DLASENIRVNCLAPG 194
+ IR+N +APG
Sbjct: 182 EYGRYGIRINAIAPG 196
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%)
Query: 687 STDKLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKK 744
+T + +G ID +NA + P + +DK+ +NL+ FL ++VL MR++
Sbjct: 85 ATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ 142
Score = 30.8 bits (68), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 629 TKSTVEFRFIG---AYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
T S R IG Y+ +K + GLT+ A + IR+N +APG I T
Sbjct: 150 TASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWT 200
>pdb|3EDM|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3EDM|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3EDM|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3EDM|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase From
Agrobacterium Tumefaciens
Length = 259
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 113/249 (45%), Gaps = 7/249 (2%)
Query: 378 RLAGKVAVVTASSDGIGFAIAKRLSTEGASVVIS-SRKESNVNKAVETLQKEGHQKISGV 436
R + VV + IG A A R + EGA+VV++ + AV ++K G ++ +
Sbjct: 5 RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALA-I 63
Query: 437 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 496
+ + + A KFG I LV A A + E E W ++ +VN+ S F
Sbjct: 64 KADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLF 123
Query: 497 LLTQEVLPYIRKRNXXXX-XXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 555
L + LP + K P L AY+ SK A++ T+ +A+++ + I
Sbjct: 124 LTAKTALPKMAKGGAIVTFSSQAGRDGGGPGAL--AYATSKGAVMTFTRGLAKEVGPK-I 180
Query: 556 RVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITG 615
RVN + PG+ T F + E E + R +++ G+VAFL SDDA+Y+TG
Sbjct: 181 RVNAVCPGMISTTFHDT-FTKPEVRERVAGATSLKREGSSEDVAGLVAFLASDDAAYVTG 239
Query: 616 EVIVAAGGM 624
GG+
Sbjct: 240 ACYDINGGV 248
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 86/189 (45%), Gaps = 6/189 (3%)
Query: 9 RLTGKVAVVTASSDGIGFAIAKRLSAEGASVVIS-SRKESNVNKAVETLQKEGHQKISGV 67
R T + VV + IG A A R + EGA+VV++ + AV ++K G ++ +
Sbjct: 5 RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALA-I 63
Query: 68 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 127
+ + + A KFG I LV A A + E E W ++ +VN+ S F
Sbjct: 64 KADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLF 123
Query: 128 LLTQEVLPYIRKRNXXXX-XXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 186
L + LP + K P L AY+ SK A++ T+ +A+++ + I
Sbjct: 124 LTAKTALPKMAKGGAIVTFSSQAGRDGGGPGAL--AYATSKGAVMTFTRGLAKEVGPK-I 180
Query: 187 RVNCLAPGI 195
RVN + PG+
Sbjct: 181 RVNAVCPGM 189
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 687 STDKLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRK 743
+ DK +G I LV A A + + E E W ++ DVNL S FL + LP M K
Sbjct: 80 AADK-FGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK 135
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 640 AYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGD 680
AY+ SK A+ T+ +A+++ P+ IRVN + PG+I T F D
Sbjct: 157 AYATSKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHD 196
>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From
Sinorhizobium Meliloti 1021
pdb|3V8B|B Chain B, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From
Sinorhizobium Meliloti 1021
pdb|3V8B|C Chain C, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From
Sinorhizobium Meliloti 1021
pdb|3V8B|D Chain D, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From
Sinorhizobium Meliloti 1021
Length = 283
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 111/250 (44%), Gaps = 10/250 (4%)
Query: 383 VAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAK 442
VA++T + GIG A A L+ +G +V R + V + + + G Q I+ + V+
Sbjct: 30 VALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIA-LEADVSD 88
Query: 443 KEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQEV 502
+ + KFG +DI+V+NA +N P+ + WD+ VN++ TFL
Sbjct: 89 ELQXRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLT 148
Query: 503 LPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTAL--LGLTKAVAQDLASENIRVNCL 560
+PY+++R F GA + + T + + + +A +L +IRVN +
Sbjct: 149 VPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAV 208
Query: 561 APGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGG-------IVAFLCSDDASYI 613
PG +T + E P G++ + D G ++ FL S+ A ++
Sbjct: 209 CPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSERARHV 268
Query: 614 TGEVIVAAGG 623
TG + GG
Sbjct: 269 TGSPVWIDGG 278
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 3/183 (1%)
Query: 14 VAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAK 73
VA++T + GIG A A L+A+G +V R + V + + + G Q I+ + V+
Sbjct: 30 VALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIA-LEADVSD 88
Query: 74 KEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQEV 133
+ + KFG +DI+V+NA +N P+ + WD+ VN++ TFL
Sbjct: 89 ELQXRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLT 148
Query: 134 LPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTAL--LGLTKAVAQDLASENIRVNCL 191
+PY+++R F GA + + T + + + +A +L +IRVN +
Sbjct: 149 VPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAV 208
Query: 192 APG 194
PG
Sbjct: 209 CPG 211
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 32/53 (60%)
Query: 692 YGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKK 744
+G +DI+V+NA +N P+ + WD+ VNL+ +FL +PY++++
Sbjct: 103 FGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQR 155
>pdb|3IAH|A Chain A, Crystal Structure Of Short Chain Dehydrogenase (ycik) From
Salmonella Enterica Subsp. Enterica Serovar Typhimurium
Str. Lt2 In Complex With Nadp And Acetate.
pdb|3IAH|B Chain B, Crystal Structure Of Short Chain Dehydrogenase (ycik) From
Salmonella Enterica Subsp. Enterica Serovar Typhimurium
Str. Lt2 In Complex With Nadp And Acetate
Length = 256
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 112/247 (45%), Gaps = 12/247 (4%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L ++ +VT +SDGIG A + GA+V++ R E + + + + E H +
Sbjct: 13 LQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQPQWFTL 72
Query: 439 HV--AKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 496
+ E+ +++ + + +D ++ NA + GP E +W + +VNV +TF
Sbjct: 73 DLLTCTAEECRQVADRIAAHYPRLDGVLHNAGLLGEIGPXSEQDPQIWQDVXQVNVNATF 132
Query: 497 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 556
LTQ +LP + K + GAY+ SK A G + +A + + ++R
Sbjct: 133 XLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYATSKFATEGXXQVLADEYQNRSLR 192
Query: 557 VNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGE 616
VNC+ PG T+T A+ + TE+ +L P ++ + +L DD+ TG
Sbjct: 193 VNCINPGGTRTSXRASAFPTEDPQ----------KLKTPADIXPLYLWLXGDDSRRKTGX 242
Query: 617 VIVAAGG 623
A G
Sbjct: 243 TFDAQPG 249
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 2/187 (1%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L ++ +VT +SDGIG A + GA+V++ R E + + + + E H +
Sbjct: 13 LQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQPQWFTL 72
Query: 70 HV--AKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 127
+ E+ +++ + + +D ++ NA + GP E +W + +VNV +TF
Sbjct: 73 DLLTCTAEECRQVADRIAAHYPRLDGVLHNAGLLGEIGPXSEQDPQIWQDVXQVNVNATF 132
Query: 128 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 187
LTQ +LP + K + GAY+ SK A G + +A + + ++R
Sbjct: 133 XLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYATSKFATEGXXQVLADEYQNRSLR 192
Query: 188 VNCLAPG 194
VNC+ PG
Sbjct: 193 VNCINPG 199
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 639 GAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
GAY+ SK A G +V+A++ ++RVNC+ PG RT
Sbjct: 166 GAYATSKFATEGXXQVLADEYQNRSLRVNCINPGGTRT 203
>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
Hydroxysteroid Dehydrogenase Like 2 (Hsdl2)
pdb|3KVO|B Chain B, Crystal Structure Of The Catalytic Domain Of Human
Hydroxysteroid Dehydrogenase Like 2 (Hsdl2)
Length = 346
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 97/197 (49%), Gaps = 12/197 (6%)
Query: 375 NASRLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKE-------SNVNKAVETLQK 427
N RLAG +T +S GIG AIA + + +GA++VI+++ + A E ++
Sbjct: 39 NTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEA 98
Query: 428 EGHQKISGVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKI 487
G + + +V V ++ E A KKFGGIDILV+NA+ T ++ P D +
Sbjct: 99 VGGKALPCIV-DVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTN-TLDTPTKRLDLM 156
Query: 488 FEVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAP--FKLLGAYSVSKTALLGLTKA 545
VN + T+L ++ +PY++K L P FK AY+++K +
Sbjct: 157 MNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLG 216
Query: 546 VAQDLASENIRVNCLAP 562
+A++ E I VN L P
Sbjct: 217 MAEEFKGE-IAVNALWP 232
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 12/197 (6%)
Query: 6 NASRLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKE-------SNVNKAVETLQK 58
N RL G +T +S GIG AIA + + +GA++VI+++ + A E ++
Sbjct: 39 NTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEA 98
Query: 59 EGHQKISGVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKI 118
G + + +V V ++ E A KKFGGIDILV+NA+ T ++ P D +
Sbjct: 99 VGGKALPCIV-DVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTN-TLDTPTKRLDLM 156
Query: 119 FEVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAP--FKLLGAYSVSKTALLGLTKA 176
VN + T+L ++ +PY++K L P FK AY+++K +
Sbjct: 157 MNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLG 216
Query: 177 VAQDLASENIRVNCLAP 193
+A++ E I VN L P
Sbjct: 217 MAEEFKGE-IAVNALWP 232
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 690 KLYGGIDILVSNA-AVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKKK 745
K +GGIDILV+NA A++ N ++ D + +VN + ++L ++ +PY++K K
Sbjct: 125 KKFGGIDILVNNASAISLTNT--LDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSK 179
>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From
Polaromonas Sp. Js666 In Nadp Bound Form
pdb|4IQG|A Chain A, Crystal Structure Of Bpro0239 Oxidoreductase From
Polaromonas Sp. Js666 In Nadp Bound Form
pdb|4IQG|B Chain B, Crystal Structure Of Bpro0239 Oxidoreductase From
Polaromonas Sp. Js666 In Nadp Bound Form
pdb|4IQG|D Chain D, Crystal Structure Of Bpro0239 Oxidoreductase From
Polaromonas Sp. Js666 In Nadp Bound Form
Length = 271
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 116/249 (46%), Gaps = 11/249 (4%)
Query: 382 KVAVVTASSDGIGFAIAKRLSTEGASVVIS-SRKESNVNKAVETLQKEGHQKISGVVCHV 440
KV ++T S GIG A A + +G +V ++ + + ++ V +++ G Q ++ V V
Sbjct: 26 KVVLITGGSRGIGAASALLAARQGYAVAVNYASNSAAADEVVRQIREAGGQALA-VQADV 84
Query: 441 AKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQ 500
AK+ + FE + + G + LV+NA V T V + FE+NV +FL +
Sbjct: 85 AKEREVLAXFETVDAQLGRLSALVNNAGVVDQTTRVDGITLERLQRXFEINVFGSFLCAR 144
Query: 501 EVLPYIRKRNXXXXXXXXXXXXLAPFKLLGA------YSVSKTALLGLTKAVAQDLASEN 554
E + R A LG+ Y+ +K A+ T +A+++A+E
Sbjct: 145 EAVKRXSTRYGGSGGSIVNVSSAAA--RLGSPGQYVDYAAAKGAIDTFTLGLAKEVATEG 202
Query: 555 IRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYIT 614
IRVN + PGI +T A+ A ++A VP R E+ + +L D ASY T
Sbjct: 203 IRVNAVRPGIIETDIHASGGLPNRARDVA-PQVPXQRAGTAREVAEAIVWLLGDQASYTT 261
Query: 615 GEVIVAAGG 623
G ++ GG
Sbjct: 262 GALLDVTGG 270
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 104/247 (42%), Gaps = 28/247 (11%)
Query: 13 KVAVVTASSDGIGFAIAKRLSAEGASVVIS-SRKESNVNKAVETLQKEGHQKISGVVCHV 71
KV ++T S GIG A A + +G +V ++ + + ++ V +++ G Q ++ V V
Sbjct: 26 KVVLITGGSRGIGAASALLAARQGYAVAVNYASNSAAADEVVRQIREAGGQALA-VQADV 84
Query: 72 AKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQ 131
AK+ + FE + + G + LV+NA V T V + FE+NV +FL +
Sbjct: 85 AKEREVLAXFETVDAQLGRLSALVNNAGVVDQTTRVDGITLERLQRXFEINVFGSFLCAR 144
Query: 132 EVLPYIRKRNXXXXXXXXXXXXLAPFKLLGA------YSVSKTALLGLTKAVAQDLASEN 185
E + R A LG+ Y+ +K A+ T +A+++A+E
Sbjct: 145 EAVKRXSTRYGGSGGSIVNVSSAAA--RLGSPGQYVDYAAAKGAIDTFTLGLAKEVATEG 202
Query: 186 IRVNCLAPGIXXXXXXXXXXXXXXXXXNDEPIVYTSNTAPGEMKDVLGPLPSSYSPQYVE 245
IRVN + PGI E ++ S P +DV +P + E
Sbjct: 203 IRVNAVRPGII------------------ETDIHASGGLPNRARDVAPQVPXQRAGTARE 244
Query: 246 AAWYPWW 252
A W
Sbjct: 245 VAEAIVW 251
Score = 32.7 bits (73), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
Y+ +K A+ T +A+++A E IRVN + PG+I T
Sbjct: 180 YAAAKGAIDTFTLGLAKEVATEGIRVNAVRPGIIETDI 217
>pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|B Chain B, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|C Chain C, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|D Chain D, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|E Chain E, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|F Chain F, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|G Chain G, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|H Chain H, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|I Chain I, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|J Chain J, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|K Chain K, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|L Chain L, Mannitol Dehydrogenase From Agaricus Bisporus
Length = 265
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 112/250 (44%), Gaps = 11/250 (4%)
Query: 382 KVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 441
K +VT + GIG A + ++ GA+V + R ++ + E + KE K C V+
Sbjct: 15 KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVS 74
Query: 442 KKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 501
+ K + + G I L++NA V+ P E + +++VNV F +
Sbjct: 75 NTDIVTKTIQQIDADLGPISGLIANAGVS-VVKPATELTHEDFAFVYDVNVFGVFNTCRA 133
Query: 502 VLP-YIRK--RNXXXXXXXXXXXXLAPFKLLGA-----YSVSKTALLGLTKAVAQDLASE 553
V +++K + + L G+ Y+ SK A L K +A + AS
Sbjct: 134 VAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASA 193
Query: 554 NIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYI 613
IRVN L+PG T A + + H+ SN+P+ R A P+EM G L SD A+Y+
Sbjct: 194 GIRVNALSPGYVNTDQTAHMDKKIRDHQ--ASNIPLNRFAQPEEMTGQAILLLSDHATYM 251
Query: 614 TGEVIVAAGG 623
TG GG
Sbjct: 252 TGGEYFIDGG 261
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 9/190 (4%)
Query: 13 KVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 72
K +VT + GIG A + ++A GA+V + R ++ + E + KE K C V+
Sbjct: 15 KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVS 74
Query: 73 KKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 132
+ K + + G I L++NA V+ P E + +++VNV F +
Sbjct: 75 NTDIVTKTIQQIDADLGPISGLIANAGVS-VVKPATELTHEDFAFVYDVNVFGVFNTCRA 133
Query: 133 VLP-YIRK--RNXXXXXXXXXXXXLAPFKLLGA-----YSVSKTALLGLTKAVAQDLASE 184
V +++K + + L G+ Y+ SK A L K +A + AS
Sbjct: 134 VAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASA 193
Query: 185 NIRVNCLAPG 194
IRVN L+PG
Sbjct: 194 GIRVNALSPG 203
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
Y+ SK A L K +A + A IRVN L+PG + T
Sbjct: 172 YNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNT 207
>pdb|3TFO|A Chain A, Crystal Structure Of A Putative
3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From
Sinorhizobium Meliloti
pdb|3TFO|B Chain B, Crystal Structure Of A Putative
3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From
Sinorhizobium Meliloti
pdb|3TFO|C Chain C, Crystal Structure Of A Putative
3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From
Sinorhizobium Meliloti
pdb|3TFO|D Chain D, Crystal Structure Of A Putative
3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From
Sinorhizobium Meliloti
Length = 264
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 94/196 (47%), Gaps = 4/196 (2%)
Query: 382 KVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 441
KV ++T +S GIG IA+ L GA +++ +R+++ + ++ G ++ V+ V
Sbjct: 5 KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVL-DVT 63
Query: 442 KKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 501
+ + A +G ID+LV+NA V P + P+ + W+++ +VN+K
Sbjct: 64 DRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLS-PLAAVKVDEWERMIDVNIKGVLWGIGA 122
Query: 502 VLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCLA 561
VLP + + L+ Y +K A+ ++ + Q+ S NIRV C+
Sbjct: 123 VLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQE--STNIRVTCVN 180
Query: 562 PGITKTKFAAALYETE 577
PG+ +++ A + E
Sbjct: 181 PGVVESELAGTITHEE 196
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 88/183 (48%), Gaps = 4/183 (2%)
Query: 13 KVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 72
KV ++T +S GIG IA+ L GA +++ +R+++ + ++ G ++ V+ V
Sbjct: 5 KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVL-DVT 63
Query: 73 KKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 132
+ + A +G ID+LV+NA V P + P+ + W+++ +VN+K
Sbjct: 64 DRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLS-PLAAVKVDEWERMIDVNIKGVLWGIGA 122
Query: 133 VLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCLA 192
VLP + + L+ Y +K A+ ++ + Q+ S NIRV C+
Sbjct: 123 VLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQE--STNIRVTCVN 180
Query: 193 PGI 195
PG+
Sbjct: 181 PGV 183
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 692 YGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKKK 745
+G ID+LV+NA V P + PL W+++ DVN+K VLP M ++
Sbjct: 79 WGRIDVLVNNAGVMPLS-PLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQR 131
>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase
(Target Psi- 012078) From Sinorhizobium Meliloti 1021
pdb|4E6P|B Chain B, Crystal Structure Of A Probable Sorbitol Dehydrogenase
(Target Psi- 012078) From Sinorhizobium Meliloti 1021
pdb|4E6P|C Chain C, Crystal Structure Of A Probable Sorbitol Dehydrogenase
(Target Psi- 012078) From Sinorhizobium Meliloti 1021
pdb|4E6P|D Chain D, Crystal Structure Of A Probable Sorbitol Dehydrogenase
(Target Psi- 012078) From Sinorhizobium Meliloti 1021
Length = 259
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 114/256 (44%), Gaps = 15/256 (5%)
Query: 378 RLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVV 437
RL GK A++T S+ GIG A A+ EGA+V I+ + ++ +A + + G + V
Sbjct: 5 RLEGKSALITGSARGIGRAFAEAYVREGATVAIA---DIDIERARQAAAEIGPAAYA-VQ 60
Query: 438 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKST-F 496
V +++ + GG+DILV+NAA+ P+VE ++K+F +NV T F
Sbjct: 61 XDVTRQDSIDAAIAATVEHAGGLDILVNNAALFD-LAPIVEITRESYEKLFAINVAGTLF 119
Query: 497 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 556
L I + L+ Y +K A++ LT++ DL I
Sbjct: 120 TLQAAARQXIAQGRGGKIINXASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRIN 179
Query: 557 VNCLAPGITKTKF------AAALYETE---EAHEIAVSNVPMGRLAVPDEMGGIVAFLCS 607
VN +APG+ + A YE E + VP GR +++ G FL S
Sbjct: 180 VNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRXGTAEDLTGXAIFLAS 239
Query: 608 DDASYITGEVIVAAGG 623
++ YI + GG
Sbjct: 240 AESDYIVSQTYNVDGG 255
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 90/188 (47%), Gaps = 6/188 (3%)
Query: 9 RLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVV 68
RL GK A++T S+ GIG A A+ EGA+V I+ + ++ +A + + G + V
Sbjct: 5 RLEGKSALITGSARGIGRAFAEAYVREGATVAIA---DIDIERARQAAAEIGPAAYA-VQ 60
Query: 69 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKST-F 127
V +++ + GG+DILV+NAA+ P+VE ++K+F +NV T F
Sbjct: 61 XDVTRQDSIDAAIAATVEHAGGLDILVNNAALFD-LAPIVEITRESYEKLFAINVAGTLF 119
Query: 128 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 187
L I + L+ Y +K A++ LT++ DL I
Sbjct: 120 TLQAAARQXIAQGRGGKIINXASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRIN 179
Query: 188 VNCLAPGI 195
VN +APG+
Sbjct: 180 VNAIAPGV 187
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 684 AMLSTDKLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFL 732
A+ +T + GG+DILV+NAA+ P+VE + ++K+F +N+ +
Sbjct: 72 AIAATVEHAGGLDILVNNAALFDL-APIVEITRESYEKLFAINVAGTLF 119
>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase
(Saro_0793) From Novosphingobium Aromaticivorans
pdb|3IOY|B Chain B, Structure Of Putative Short-Chain Dehydrogenase
(Saro_0793) From Novosphingobium Aromaticivorans
Length = 319
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 99/201 (49%), Gaps = 8/201 (3%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQ-KISGVV 437
AG+ A VT ++G+G + ++L +G V I+ ++ +++KA+ TL+ EG ++ GV
Sbjct: 6 FAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQ 65
Query: 438 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 497
VA +E + + E +FG + IL +NA VN P+ E + WD + VN+
Sbjct: 66 LDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQ-PIEESSYDDWDWLLGVNLHGVVN 124
Query: 498 LTQEVLPYIRKR---NXXXXXXXXXXXXLAPFKLLGA---YSVSKTALLGLTKAVAQDLA 551
+P + +R +A F G+ Y+ +K A+ GL++++ L
Sbjct: 125 GVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYSLL 184
Query: 552 SENIRVNCLAPGITKTKFAAA 572
I V+ L PG+ K+ A+
Sbjct: 185 KYEIGVSVLCPGLVKSYIYAS 205
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 94/193 (48%), Gaps = 8/193 (4%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQ-KISGVV 68
G+ A VT ++G+G + ++L +G V I+ ++ +++KA+ TL+ EG ++ GV
Sbjct: 6 FAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQ 65
Query: 69 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 128
VA +E + + E +FG + IL +NA VN P+ E + WD + VN+
Sbjct: 66 LDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQ-PIEESSYDDWDWLLGVNLHGVVN 124
Query: 129 LTQEVLPYIRKR---NXXXXXXXXXXXXLAPFKLLGA---YSVSKTALLGLTKAVAQDLA 182
+P + +R +A F G+ Y+ +K A+ GL++++ L
Sbjct: 125 GVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYSLL 184
Query: 183 SENIRVNCLAPGI 195
I V+ L PG+
Sbjct: 185 KYEIGVSVLCPGL 197
>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|B Chain B, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|C Chain C, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|D Chain D, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|E Chain E, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|F Chain F, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|G Chain G, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|H Chain H, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
Length = 281
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 118/276 (42%), Gaps = 33/276 (11%)
Query: 381 GKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKES------------NVNKAVETLQKE 428
GK A++T + G+G + A L+ GA + I R E+ ++ + V ++K
Sbjct: 10 GKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT 69
Query: 429 GHQKISGVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNP-ATGPVVECPENVWDKI 487
G + IS V V + + AE GGIDI ++NA ++ A P VE + WD++
Sbjct: 70 GRRCISAKV-DVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQ--WDEV 126
Query: 488 FEVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVA 547
N+ TF V P + KRN + +Y SK ++GLTK A
Sbjct: 127 IGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKCAA 186
Query: 548 QDLASENIRVNCLAPG-----ITKTKFA----------AALYETEEAHEIAVSNVPMGRL 592
DL I VN +APG +T F L + E A ++
Sbjct: 187 HDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESV--FASLHLQYAPF 244
Query: 593 AVPDEMGGIVAFLCSDDASYITGEVIVAAGGMQSRL 628
P+E+ V FL + +S+ITG V+ G +R+
Sbjct: 245 LKPEEVTRAVLFLVDEASSHITGTVLPIDAGATARM 280
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 89/196 (45%), Gaps = 16/196 (8%)
Query: 12 GKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKES------------NVNKAVETLQKE 59
GK A++T + G+G + A L+ GA + I R E+ ++ + V ++K
Sbjct: 10 GKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT 69
Query: 60 GHQKISGVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNP-ATGPVVECPENVWDKI 118
G + IS V V + + AE GGIDI ++NA ++ A P VE + WD++
Sbjct: 70 GRRCISAKV-DVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQ--WDEV 126
Query: 119 FEVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVA 178
N+ TF V P + KRN + +Y SK ++GLTK A
Sbjct: 127 IGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKCAA 186
Query: 179 QDLASENIRVNCLAPG 194
DL I VN +APG
Sbjct: 187 HDLVGYGITVNAVAPG 202
Score = 35.8 bits (81), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 18/110 (16%)
Query: 640 AYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGDRMIAMLSTDKLYGGI---- 695
+Y SK + GLTK A DL I VN +APG I T M D ++G +
Sbjct: 170 SYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETP-------MTHNDFVFGTMRPDL 222
Query: 696 ------DILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLP 739
D+ A+++ P ++ EV +F V+ SS +T VLP
Sbjct: 223 EKPTLKDVESVFASLHLQYAPFLKPEEVTRAVLFLVDEASSH-ITGTVLP 271
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 693 GGIDILVSNAAVNP-ANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKKK 745
GGIDI ++NA ++ A P VE ++ WD++ NL +F V P M K+
Sbjct: 98 GGIDIAITNAGISTIALLPEVESAQ--WDEVIGTNLTGTFNTIAAVAPGMIKRN 149
>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
Length = 264
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 116/250 (46%), Gaps = 13/250 (5%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L KV V++ +G +A+R + +GA +V+++R + + + G + +S V
Sbjct: 9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALS-VGT 67
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECP-ENVWDKIFEVNVKSTFL 497
+ L + K +G +D++++NA P+ P E++ D I E+ V
Sbjct: 68 DITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAI-ELTVFGALR 126
Query: 498 LTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 557
L Q P + + + K GAY ++K+ALL +++ +A +L + IRV
Sbjct: 127 LIQGFTPALEESKGAVVNVNSMVVRHSQAKY-GAYKMAKSALLAMSQTLATELGEKGIRV 185
Query: 558 NCLAPGIT-----KTKF--AAALYET--EEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSD 608
N + PG K+ F A Y T E+ + A + + RL DE+ + F+ SD
Sbjct: 186 NSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMASD 245
Query: 609 DASYITGEVI 618
AS ITG+ +
Sbjct: 246 LASGITGQAL 255
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 88/186 (47%), Gaps = 4/186 (2%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
LT KV V++ +G +A+R + +GA +V+++R + + + G + +S V
Sbjct: 9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALS-VGT 67
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECP-ENVWDKIFEVNVKSTFL 128
+ L + K +G +D++++NA P+ P E++ D I E+ V
Sbjct: 68 DITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAI-ELTVFGALR 126
Query: 129 LTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 188
L Q P + + + K GAY ++K+ALL +++ +A +L + IRV
Sbjct: 127 LIQGFTPALEESKGAVVNVNSMVVRHSQAKY-GAYKMAKSALLAMSQTLATELGEKGIRV 185
Query: 189 NCLAPG 194
N + PG
Sbjct: 186 NSVLPG 191
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 639 GAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLI 674
GAY ++K+AL +++ +A +L + IRVN + PG I
Sbjct: 158 GAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYI 193
>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain
B-356.
pdb|2Y93|B Chain B, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain
B-356.
pdb|2Y99|A Chain A, Crystal Structure Of
Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase
(Bphb)from Pandoraea Pnomenusa Strain B-356 Complex With
Co-Enzyme Nad
pdb|2Y99|B Chain B, Crystal Structure Of
Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase
(Bphb)from Pandoraea Pnomenusa Strain B-356 Complex With
Co-Enzyme Nad
pdb|3ZV3|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-
356 In Intermediate State Of Substrate Binding Loop
pdb|3ZV3|B Chain B, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-
356 In Intermediate State Of Substrate Binding Loop
pdb|3ZV4|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 In Apo Form At 1.8 Angstrom
pdb|3ZV4|B Chain B, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 In Apo Form At 1.8 Angstrom
pdb|3ZV5|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 Complex With Co-Enzyme Nad And Product 2,3-
Dihydroxybiphenyl
pdb|3ZV5|B Chain B, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 Complex With Co-Enzyme Nad And Product 2,3-
Dihydroxybiphenyl
pdb|3ZV6|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 Complex With Co-Enzyme Nad And Product Analog 4,4'-
Dihydroxybiphenyl
pdb|3ZV6|B Chain B, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3-
Dehydrogenase (Bphb) From Pandoraea Pnomenusa Strain B-
356 Complex With Co-Enzyme Nad And Product Analog 4,4'-
Dihydroxybiphenyl
Length = 281
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 128/270 (47%), Gaps = 33/270 (12%)
Query: 378 RLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQK----EGHQKI 433
+L G+VA++T + G+G A+ R EGA V + ++K+ E L++ G +
Sbjct: 2 KLTGEVALITGGASGLGRALVDRFVAEGARVAV-------LDKSAERLRELEVAHGGNAV 54
Query: 434 SGVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPEN----VWDKIFE 489
GVV V +D+++ E FG ID L+ NA + + + + PE+ +D IF
Sbjct: 55 -GVVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFH 113
Query: 490 VNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGA---YSVSKTALLGLTKAV 546
VNVK + LP + A F G Y+ +K A++GL + +
Sbjct: 114 VNVKGYIHAVKACLPALVSSRGSVVFTISN----AGFYPNGGGPLYTATKHAVVGLVRQM 169
Query: 547 AQDLASENIRVNCLAPGITKTKF--AAALYETEEA------HEIAVSNVPMGRL-AVPDE 597
A +LA ++RVN +APG T ++L +E++ ++ S +P+GR+ A+ +
Sbjct: 170 AFELAP-HVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEY 228
Query: 598 MGGIVAFLCSDDASYITGEVIVAAGGMQSR 627
G V F D+ TG ++ GGM R
Sbjct: 229 TGAYVFFATRGDSLPATGALLNYDGGMGVR 258
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 97/197 (49%), Gaps = 24/197 (12%)
Query: 9 RLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQK----EGHQKI 64
+LTG+VA++T + G+G A+ R AEGA V + ++K+ E L++ G +
Sbjct: 2 KLTGEVALITGGASGLGRALVDRFVAEGARVAV-------LDKSAERLRELEVAHGGNAV 54
Query: 65 SGVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPEN----VWDKIFE 120
GVV V +D+++ E FG ID L+ NA + + + + PE+ +D IF
Sbjct: 55 -GVVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFH 113
Query: 121 VNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGA---YSVSKTALLGLTKAV 177
VNVK + LP + A F G Y+ +K A++GL + +
Sbjct: 114 VNVKGYIHAVKACLPALVSSRGSVVFTISN----AGFYPNGGGPLYTATKHAVVGLVRQM 169
Query: 178 AQDLASENIRVNCLAPG 194
A +LA ++RVN +APG
Sbjct: 170 AFELAP-HVRVNGVAPG 185
>pdb|1W6U|A Chain A, Structure Of Human Decr Ternary Complex
pdb|1W6U|B Chain B, Structure Of Human Decr Ternary Complex
pdb|1W6U|D Chain D, Structure Of Human Decr Ternary Complex
pdb|1W6U|C Chain C, Structure Of Human Decr Ternary Complex
Length = 302
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 109/245 (44%), Gaps = 3/245 (1%)
Query: 381 GKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHV 440
GKVA +T G+G + LS+ GA VI+SRK + E + + K+ + C V
Sbjct: 26 GKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDV 85
Query: 441 AKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQ 500
+ Q K G +I+++NAA N P N W I ++ + T +T
Sbjct: 86 RDPDMVQNTVSELIKVAGHPNIVINNAAGN-FISPTERLSPNAWKTITDIVLNGTAFVTL 144
Query: 501 EV-LPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNC 559
E+ I+ + + + +K + ++K++A + +R N
Sbjct: 145 EIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNV 204
Query: 560 LAPGITKTKFA-AALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVI 618
+ PG KTK A + L T + + +P GRL +E+ + AFLCSD AS+I G VI
Sbjct: 205 IQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWINGAVI 264
Query: 619 VAAGG 623
GG
Sbjct: 265 KFDGG 269
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 2/186 (1%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
GKVA +T G+G + LS+ GA VI+SRK + E + + K+ + C
Sbjct: 24 FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQC 83
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
V + Q K G +I+++NAA N P N W I ++ + T +
Sbjct: 84 DVRDPDMVQNTVSELIKVAGHPNIVINNAAGN-FISPTERLSPNAWKTITDIVLNGTAFV 142
Query: 130 TQEV-LPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 188
T E+ I+ + + + +K + ++K++A + +R
Sbjct: 143 TLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRF 202
Query: 189 NCLAPG 194
N + PG
Sbjct: 203 NVIQPG 208
>pdb|2P91|A Chain A, Crystal Structure Of Enoyl-[acyl-Carrier-Protein]
Reductase (Nadh) From Aquifex Aeolicus Vf5
pdb|2P91|B Chain B, Crystal Structure Of Enoyl-[acyl-Carrier-Protein]
Reductase (Nadh) From Aquifex Aeolicus Vf5
pdb|2P91|C Chain C, Crystal Structure Of Enoyl-[acyl-Carrier-Protein]
Reductase (Nadh) From Aquifex Aeolicus Vf5
pdb|2P91|D Chain D, Crystal Structure Of Enoyl-[acyl-Carrier-Protein]
Reductase (Nadh) From Aquifex Aeolicus Vf5
Length = 285
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 113/254 (44%), Gaps = 12/254 (4%)
Query: 379 LAGKVAVVT--ASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGV 436
L GK A++T A+ I + IAK EGA + + + E + G + V
Sbjct: 19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLV--V 76
Query: 437 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPA---TGPVVECPENVWDKIFEVNVK 493
C V+ ED + L + E+ +G +DI+V + A P G V++ + +++V
Sbjct: 77 KCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVY 136
Query: 494 STFLLTQEVLPYIRKRNXXXXXXXX--XXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLA 551
S LT+E+LP + RN + + ++G ++K AL + +A D+A
Sbjct: 137 SLIALTRELLPLMEGRNGAIVTLSYYGAEKVVPHYNVMG---IAKAALESTVRYLAYDIA 193
Query: 552 SENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDAS 611
R+N ++ G KT A ++ E P G+ +++G FLCSD A
Sbjct: 194 KHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIEDVGDTAVFLCSDWAR 253
Query: 612 YITGEVIVAAGGMQ 625
ITGEV+ G
Sbjct: 254 AITGEVVHVDNGYH 267
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 12/192 (6%)
Query: 10 LTGKVAVVT--ASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGV 67
L GK A++T A+ I + IAK EGA + + + E + G + V
Sbjct: 19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLV--V 76
Query: 68 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPA---TGPVVECPENVWDKIFEVNVK 124
C V+ ED + L + E+ +G +DI+V + A P G V++ + +++V
Sbjct: 77 KCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVY 136
Query: 125 STFLLTQEVLPYIRKRNXXXXXXXX--XXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLA 182
S LT+E+LP + RN + + ++G ++K AL + +A D+A
Sbjct: 137 SLIALTRELLPLMEGRNGAIVTLSYYGAEKVVPHYNVMG---IAKAALESTVRYLAYDIA 193
Query: 183 SENIRVNCLAPG 194
R+N ++ G
Sbjct: 194 KHGHRINAISAG 205
>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli
Cfn 42
pdb|4E3Z|B Chain B, Crystal Structure Of A Oxidoreductase From Rhizobium Etli
Cfn 42
Length = 272
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 109/247 (44%), Gaps = 9/247 (3%)
Query: 383 VAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAK 442
V +VT S GIG A+ + + +G V ++ AV E + + V
Sbjct: 28 VVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGN 87
Query: 443 KEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQEV 502
D F +++FG +D LV+NA + V E ++ VNV + L E
Sbjct: 88 AADIAAXFSAVDRQFGRLDGLVNNAGIVDYPQRVDEXSVERIERXLRVNVTGSILCAAEA 147
Query: 503 LPYIRKRNXXXXXXXXXXXXLAPFKLLGA------YSVSKTALLGLTKAVAQDLASENIR 556
+ R + +LG+ Y+ SK A+ T +A+++A+E IR
Sbjct: 148 VR--RXSRLYSGQGGAIVNVSSXAAILGSATQYVDYAASKAAIDTFTIGLAREVAAEGIR 205
Query: 557 VNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGE 616
VN + PGI +T A+ + A E A S VP R P+E+ + +L S ASY+TG
Sbjct: 206 VNAVRPGIIETDLHASGGLPDRAREXAPS-VPXQRAGXPEEVADAILYLLSPSASYVTGS 264
Query: 617 VIVAAGG 623
++ +GG
Sbjct: 265 ILNVSGG 271
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 78/188 (41%), Gaps = 8/188 (4%)
Query: 14 VAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAK 73
V +VT S GIG A+ + + +G V ++ AV E + + V
Sbjct: 28 VVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGN 87
Query: 74 KEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQEV 133
D F +++FG +D LV+NA + V E ++ VNV + L E
Sbjct: 88 AADIAAXFSAVDRQFGRLDGLVNNAGIVDYPQRVDEXSVERIERXLRVNVTGSILCAAEA 147
Query: 134 LPYIRKRNXXXXXXXXXXXXLAPFKLLGA------YSVSKTALLGLTKAVAQDLASENIR 187
+ R + +LG+ Y+ SK A+ T +A+++A+E IR
Sbjct: 148 VR--RXSRLYSGQGGAIVNVSSXAAILGSATQYVDYAASKAAIDTFTIGLAREVAAEGIR 205
Query: 188 VNCLAPGI 195
VN + PGI
Sbjct: 206 VNAVRPGI 213
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
Y+ SK A+ T +A ++A E IRVN + PG+I T
Sbjct: 181 YAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDL 218
>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC6|B Chain B, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC6|C Chain C, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC6|D Chain D, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC7|A Chain A, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC7|B Chain B, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC7|C Chain C, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
pdb|4FC7|D Chain D, Studies On Dcr Shed New Light On Peroxisomal
Beta-Oxidation: Crystal Structure Of The Ternary Complex
Of Pdcr
Length = 277
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 111/252 (44%), Gaps = 14/252 (5%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L KVA +T GIGF IA+ G VI+SR V A L ++ +
Sbjct: 25 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSM 84
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPE-----NVWDKIFEVNVK 493
V + A K+FG IDIL++ AA N CP N + + +++
Sbjct: 85 DVRAPPAVMAAVDQALKEFGRIDILINCAAGN------FLCPAGALSFNAFKTVMDIDTS 138
Query: 494 STFLLTQEVL-PYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLAS 552
TF +++ + + R + A S +K A+ +T+ +A +
Sbjct: 139 GTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGS-AKAAVDAMTRHLAVEWGP 197
Query: 553 ENIRVNCLAPG-ITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDAS 611
+NIRVN LAPG I+ T+ L + + V+ P+ RL E+ V +L S AS
Sbjct: 198 QNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLYLASPLAS 257
Query: 612 YITGEVIVAAGG 623
Y+TG V+VA GG
Sbjct: 258 YVTGAVLVADGG 269
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 80/191 (41%), Gaps = 13/191 (6%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L KVA +T GIGF IA+ G VI+SR V A L ++ +
Sbjct: 25 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSM 84
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPE-----NVWDKIFEVNVK 124
V + A K+FG IDIL++ AA N CP N + + +++
Sbjct: 85 DVRAPPAVMAAVDQALKEFGRIDILINCAAGN------FLCPAGALSFNAFKTVMDIDTS 138
Query: 125 STFLLTQEVL-PYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLAS 183
TF +++ + + R + A S +K A+ +T+ +A +
Sbjct: 139 GTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGS-AKAAVDAMTRHLAVEWGP 197
Query: 184 ENIRVNCLAPG 194
+NIRVN LAPG
Sbjct: 198 QNIRVNSLAPG 208
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 644 SKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGDRMIA 684
+K A+ +T+ +A + P+NIRVN LAPG I G R +
Sbjct: 180 AKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLG 220
>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase
Type1, Complexed With Nad+
Length = 267
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 16/209 (7%)
Query: 376 ASRLAGKVAVVTASSDGIGFAIAKRLSTEGASV-VISSRKESNVNKAVETLQKEGHQKIS 434
A + GKVA+VT ++ GIG A A+ L +GA V ++ E+ V ++ QK
Sbjct: 2 AHMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTL 61
Query: 435 GVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKS 494
+ C VA ++ + F FG +DILV+NA VN E W+K ++N+ S
Sbjct: 62 FIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVN---------NEKNWEKTLQINLVS 112
Query: 495 TFLLTQEVLPYIRKRNXXXXXXXXXXXXLA---PFKLLGAYSVSKTALLGLTK--AVAQD 549
T L Y+ K+N LA P Y SK ++G T+ A+A +
Sbjct: 113 VISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAAN 172
Query: 550 LASENIRVNCLAPGITKTKFAAALYETEE 578
L + +R+N + PG T ++ E EE
Sbjct: 173 LMNSGVRLNAICPGFVNTAILESI-EKEE 200
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 91/194 (46%), Gaps = 15/194 (7%)
Query: 7 ASRLTGKVAVVTASSDGIGFAIAKRLSAEGASV-VISSRKESNVNKAVETLQKEGHQKIS 65
A + GKVA+VT ++ GIG A A+ L +GA V ++ E+ V ++ QK
Sbjct: 2 AHMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTL 61
Query: 66 GVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKS 125
+ C VA ++ + F FG +DILV+NA VN E W+K ++N+ S
Sbjct: 62 FIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVN---------NEKNWEKTLQINLVS 112
Query: 126 TFLLTQEVLPYIRKRNXXXXXXXXXXXXLA---PFKLLGAYSVSKTALLGLTK--AVAQD 180
T L Y+ K+N LA P Y SK ++G T+ A+A +
Sbjct: 113 VISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAAN 172
Query: 181 LASENIRVNCLAPG 194
L + +R+N + PG
Sbjct: 173 LMNSGVRLNAICPG 186
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 9/53 (16%)
Query: 692 YGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKK 744
+G +DILV+NA VN +E W+K +NL S T L YM K+
Sbjct: 84 FGRLDILVNNAGVN---------NEKNWEKTLQINLVSVISGTYLGLDYMSKQ 127
>pdb|3KSU|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From
Oenococcus Oeni Psu-1
pdb|3KSU|B Chain B, Crystal Structure Of Short-Chain Dehydrogenase From
Oenococcus Oeni Psu-1
Length = 262
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 116/253 (45%), Gaps = 11/253 (4%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVI---SSRKESNVNKAVETLQKEGHQKISG 435
L KV V+ +G AK + E ++V+ ++ NK + L+ +G K++
Sbjct: 9 LKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQG-AKVAL 67
Query: 436 VVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKST 495
++ +E+ KLF+ AEK+FG +DI + N P+VE E +D + +N K
Sbjct: 68 YQSDLSNEEEVAKLFDFAEKEFGKVDIAI-NTVGKVLKKPIVETSEAEFDAMDTINNKVA 126
Query: 496 FLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFK-LLGAYSVSKTALLGLTKAVAQDLASEN 554
+ ++ ++ N LA + Y+ +K + T+A +++L +
Sbjct: 127 YFFIKQAAKHM---NPNGHIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKELMKQQ 183
Query: 555 IRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYIT 614
I VN +APG T F ET+E+ S +L +++ I+ FL + D +I
Sbjct: 184 ISVNAIAPGPMDTSFFYG-QETKESTAFHKSQAMGNQLTKIEDIAPIIKFLTT-DGWWIN 241
Query: 615 GEVIVAAGGMQSR 627
G+ I A GG +R
Sbjct: 242 GQTIFANGGYTTR 254
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 87/189 (46%), Gaps = 9/189 (4%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVI---SSRKESNVNKAVETLQKEGHQKISG 66
L KV V+ +G AK + E ++V+ ++ NK + L+ +G K++
Sbjct: 9 LKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQG-AKVAL 67
Query: 67 VVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKST 126
++ +E+ KLF+ AEK+FG +DI + N P+VE E +D + +N K
Sbjct: 68 YQSDLSNEEEVAKLFDFAEKEFGKVDIAI-NTVGKVLKKPIVETSEAEFDAMDTINNKVA 126
Query: 127 FLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFK-LLGAYSVSKTALLGLTKAVAQDLASEN 185
+ ++ ++ N LA + Y+ +K + T+A +++L +
Sbjct: 127 YFFIKQAAKHM---NPNGHIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKELMKQQ 183
Query: 186 IRVNCLAPG 194
I VN +APG
Sbjct: 184 ISVNAIAPG 192
Score = 29.3 bits (64), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 637 FIGAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
F Y+ +K + T+ +++L + I VN +APG + T F
Sbjct: 157 FYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSF 198
>pdb|3D3W|B Chain B, Structure Of L-Xylulose Reductase With Bound Coenzyme,
Phosphate And Hydroxide
Length = 245
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 108/247 (43%), Gaps = 12/247 (4%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
LAG+ +VT + GIG + L GA VV SR +++++ V I V
Sbjct: 5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG-----IEPVCV 59
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
+ E E A G +D+LV+NAAV P +E + +D+ FEVN+++ +
Sbjct: 60 DLGDWEAT----ERALGSVGPVDLLVNNAAV-ALLQPFLEVTKEAFDRSFEVNLRAVIQV 114
Query: 499 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLL--GAYSVSKTALLGLTKAVAQDLASENIR 556
+Q V + R + + Y +K AL LTK +A +L IR
Sbjct: 115 SQIVARGLIARGVPGAIVNVSSQCXSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIR 174
Query: 557 VNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGE 616
VN + P + T A + + ++ +P+G+ A + + + FL SD + TG
Sbjct: 175 VNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGS 234
Query: 617 VIVAAGG 623
+ GG
Sbjct: 235 TLPVEGG 241
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 12/188 (6%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L G+ +VT + GIG + L A GA VV SR +++++ V I V
Sbjct: 5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG-----IEPVCV 59
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
+ E E A G +D+LV+NAAV P +E + +D+ FEVN+++ +
Sbjct: 60 DLGDWEAT----ERALGSVGPVDLLVNNAAV-ALLQPFLEVTKEAFDRSFEVNLRAVIQV 114
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLL--GAYSVSKTALLGLTKAVAQDLASENIR 187
+Q V + R + + Y +K AL LTK +A +L IR
Sbjct: 115 SQIVARGLIARGVPGAIVNVSSQCXSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIR 174
Query: 188 VNCLAPGI 195
VN + P +
Sbjct: 175 VNAVNPTV 182
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFG 679
Y +K AL LTKV+A +L P IRVN + P ++ T G
Sbjct: 150 YCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMG 188
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 693 GGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEV 737
G +D+LV+NAAV +P +E ++ +D+ F+VNL++ ++Q V
Sbjct: 75 GPVDLLVNNAAV-ALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIV 118
>pdb|1W73|A Chain A, Binary Structure Of Human Decr Solved By Semet Sad.
pdb|1W73|B Chain B, Binary Structure Of Human Decr Solved By Semet Sad.
pdb|1W73|C Chain C, Binary Structure Of Human Decr Solved By Semet Sad.
pdb|1W73|D Chain D, Binary Structure Of Human Decr Solved By Semet Sad.
pdb|1W8D|A Chain A, Binary Structure Of Human Decr.
pdb|1W8D|B Chain B, Binary Structure Of Human Decr.
pdb|1W8D|C Chain C, Binary Structure Of Human Decr.
pdb|1W8D|D Chain D, Binary Structure Of Human Decr
Length = 302
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 111/260 (42%), Gaps = 3/260 (1%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
GKVA +T G+G LS+ GA VI+SRK + E + + K+ + C
Sbjct: 24 FQGKVAFITGGGTGLGKGXTTLLSSLGAQCVIASRKXDVLKATAEQISSQTGNKVHAIQC 83
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
V + Q K G +I+++NAA N P N W I ++ + T +
Sbjct: 84 DVRDPDXVQNTVSELIKVAGHPNIVINNAAGN-FISPTERLSPNAWKTITDIVLNGTAFV 142
Query: 499 TQEV-LPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 557
T E+ I+ + + + +K + +K++A + R
Sbjct: 143 TLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAXSKSLAAEWGKYGXRF 202
Query: 558 NCLAPGITKTKFA-AALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGE 616
N + PG KTK A + L T + + +P GRL +E+ + AFLCSD AS+I G
Sbjct: 203 NVIQPGPIKTKGAFSRLDPTGTFEKEXIGRIPCGRLGTVEELANLAAFLCSDYASWINGA 262
Query: 617 VIVAAGGMQSRLTKSTVEFR 636
VI GG + ++ + R
Sbjct: 263 VIKFDGGEEVLISGEFNDLR 282
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 54/124 (43%), Gaps = 1/124 (0%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
GKVA +T G+G LS+ GA VI+SRK + E + + K+ + C
Sbjct: 24 FQGKVAFITGGGTGLGKGXTTLLSSLGAQCVIASRKXDVLKATAEQISSQTGNKVHAIQC 83
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
V + Q K G +I+++NAA N P N W I ++ + T +
Sbjct: 84 DVRDPDXVQNTVSELIKVAGHPNIVINNAAGN-FISPTERLSPNAWKTITDIVLNGTAFV 142
Query: 130 TQEV 133
T E+
Sbjct: 143 TLEI 146
>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4)
From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom
Resolution
pdb|3V1T|D Chain D, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4)
From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom
Resolution
pdb|3V1U|A Chain A, Crystal Structure Of A Beta-Ketoacyl Reductase Fabg4 From
Mycobacterium Tuberculosis H37rv Complexed With Nad+ And
Hexanoyl-Coa At 2.5 Angstrom Resolution
Length = 462
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 115/248 (46%), Gaps = 14/248 (5%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L GKVA+VT ++ GIG IA+ + +GA VV +V A E L E K+ G
Sbjct: 219 LDGKVAIVTGAARGIGATIAEVFARDGAHVV-----AIDVESAAENL-AETASKVGGTAL 272
Query: 439 --HVAKKEDRQKLFEHAEKKFGG-IDILVSNAAVNPATGPVVECPENVWDKIFEVNVKST 495
V + K+ EH GG DILV+NA + + + WD + VN+ +
Sbjct: 273 WLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDK-LLANMDDARWDAVLAVNLLAP 331
Query: 496 FLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 555
LT+ ++ +A + Y+ +K ++G+T+A+A LA++ I
Sbjct: 332 LRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGI 391
Query: 556 RVNCLAPGITKTKFAAAL-YETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYIT 614
+N +APG +T+ AA+ T E S + G+ P ++ +A+ S ++ +T
Sbjct: 392 TINAVAPGFIETQMTAAIPLATREVGRRLNSLLQGGQ---PVDVAEAIAYFASPASNAVT 448
Query: 615 GEVIVAAG 622
G VI G
Sbjct: 449 GNVIRVCG 456
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 88/188 (46%), Gaps = 10/188 (5%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L GKVA+VT ++ GIG IA+ + +GA VV +V A E L E K+ G
Sbjct: 219 LDGKVAIVTGAARGIGATIAEVFARDGAHVV-----AIDVESAAENL-AETASKVGGTAL 272
Query: 70 --HVAKKEDRQKLFEHAEKKFGG-IDILVSNAAVNPATGPVVECPENVWDKIFEVNVKST 126
V + K+ EH GG DILV+NA + + + WD + VN+ +
Sbjct: 273 WLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDK-LLANMDDARWDAVLAVNLLAP 331
Query: 127 FLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 186
LT+ ++ +A + Y+ +K ++G+T+A+A LA++ I
Sbjct: 332 LRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGI 391
Query: 187 RVNCLAPG 194
+N +APG
Sbjct: 392 TINAVAPG 399
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
Y+ +K + G+T+ +A LA + I +N +APG I T+
Sbjct: 368 YATTKAGMIGITQALAPGLAAKGITINAVAPGFIETQM 405
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 689 DKLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVL 738
D G DILV+NA + ++ L + WD + VNL + LT+ ++
Sbjct: 291 DHHGGKADILVNNAGIT-RDKLLANMDDARWDAVLAVNLLAPLRLTEGLV 339
>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Mycobacterium Tuberculosis
pdb|3LLS|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Mycobacterium Tuberculosis
Length = 475
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 115/248 (46%), Gaps = 14/248 (5%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L GKVA+VT ++ GIG IA+ + +GA VV +V A E L E K+ G
Sbjct: 232 LDGKVAIVTGAARGIGATIAEVFARDGAHVV-----AIDVESAAENL-AETASKVGGTAL 285
Query: 439 --HVAKKEDRQKLFEHAEKKFGG-IDILVSNAAVNPATGPVVECPENVWDKIFEVNVKST 495
V + K+ EH GG DILV+NA + + + WD + VN+ +
Sbjct: 286 WLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDK-LLANMDDARWDAVLAVNLLAP 344
Query: 496 FLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 555
LT+ ++ +A + Y+ +K ++G+T+A+A LA++ I
Sbjct: 345 LRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGI 404
Query: 556 RVNCLAPGITKTKFAAAL-YETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYIT 614
+N +APG +T+ AA+ T E S + G+ P ++ +A+ S ++ +T
Sbjct: 405 TINAVAPGFIETQMTAAIPLATREVGRRLNSLLQGGQ---PVDVAEAIAYFASPASNAVT 461
Query: 615 GEVIVAAG 622
G VI G
Sbjct: 462 GNVIRVCG 469
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 88/188 (46%), Gaps = 10/188 (5%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L GKVA+VT ++ GIG IA+ + +GA VV +V A E L E K+ G
Sbjct: 232 LDGKVAIVTGAARGIGATIAEVFARDGAHVV-----AIDVESAAENL-AETASKVGGTAL 285
Query: 70 --HVAKKEDRQKLFEHAEKKFGG-IDILVSNAAVNPATGPVVECPENVWDKIFEVNVKST 126
V + K+ EH GG DILV+NA + + + WD + VN+ +
Sbjct: 286 WLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDK-LLANMDDARWDAVLAVNLLAP 344
Query: 127 FLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 186
LT+ ++ +A + Y+ +K ++G+T+A+A LA++ I
Sbjct: 345 LRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGI 404
Query: 187 RVNCLAPG 194
+N +APG
Sbjct: 405 TINAVAPG 412
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
Y+ +K + G+T+ +A LA + I +N +APG I T+
Sbjct: 381 YATTKAGMIGITQALAPGLAAKGITINAVAPGFIETQM 418
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 689 DKLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVL 738
D G DILV+NA + ++ L + WD + VNL + LT+ ++
Sbjct: 304 DHHGGKADILVNNAGIT-RDKLLANMDDARWDAVLAVNLLAPLRLTEGLV 352
>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh
pdb|4FW8|B Chain B, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh
pdb|4FW8|C Chain C, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh
pdb|4FW8|D Chain D, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh
Length = 454
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 115/248 (46%), Gaps = 14/248 (5%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L GKVA+VT ++ GIG IA+ + +GA VV +V A E L E K+ G
Sbjct: 211 LDGKVAIVTGAARGIGATIAEVFARDGAHVV-----AIDVESAAENL-AETASKVGGTAL 264
Query: 439 --HVAKKEDRQKLFEHAEKKFGG-IDILVSNAAVNPATGPVVECPENVWDKIFEVNVKST 495
V + K+ EH GG DILV+NA + + + WD + VN+ +
Sbjct: 265 WLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDK-LLANMDDARWDAVLAVNLLAP 323
Query: 496 FLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 555
LT+ ++ +A + Y+ +K ++G+T+A+A LA++ I
Sbjct: 324 LRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGI 383
Query: 556 RVNCLAPGITKTKFAAAL-YETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYIT 614
+N +APG +T+ AA+ T E S + G+ P ++ +A+ S ++ +T
Sbjct: 384 TINAVAPGFIETQMTAAIPLATREVGRRLNSLLQGGQ---PVDVAEAIAYFASPASNAVT 440
Query: 615 GEVIVAAG 622
G VI G
Sbjct: 441 GNVIRVCG 448
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 88/188 (46%), Gaps = 10/188 (5%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L GKVA+VT ++ GIG IA+ + +GA VV +V A E L E K+ G
Sbjct: 211 LDGKVAIVTGAARGIGATIAEVFARDGAHVV-----AIDVESAAENL-AETASKVGGTAL 264
Query: 70 --HVAKKEDRQKLFEHAEKKFGG-IDILVSNAAVNPATGPVVECPENVWDKIFEVNVKST 126
V + K+ EH GG DILV+NA + + + WD + VN+ +
Sbjct: 265 WLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDK-LLANMDDARWDAVLAVNLLAP 323
Query: 127 FLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 186
LT+ ++ +A + Y+ +K ++G+T+A+A LA++ I
Sbjct: 324 LRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGI 383
Query: 187 RVNCLAPG 194
+N +APG
Sbjct: 384 TINAVAPG 391
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
Y+ +K + G+T+ +A LA + I +N +APG I T+
Sbjct: 360 YATTKAGMIGITQALAPGLAAKGITINAVAPGFIETQM 397
Score = 29.6 bits (65), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 689 DKLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVL 738
D G DILV+NA + ++ L + WD + VNL + LT+ ++
Sbjct: 283 DHHGGKADILVNNAGIT-RDKLLANMDDARWDAVLAVNLLAPLRLTEGLV 331
>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase
pdb|2EHD|B Chain B, Crystal Structure Analysis Of Oxidoreductase
Length = 234
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 82/187 (43%), Gaps = 6/187 (3%)
Query: 385 VVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAKKE 444
++T +S GIG A A+ L +G V + +R E + L EG + G V ++
Sbjct: 9 LITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL--EGALPLPG---DVREEG 63
Query: 445 DRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQEVLP 504
D + E+ FG + LV+NA V PV E W + + N+ FL + +P
Sbjct: 64 DWARAVAAMEEAFGELSALVNNAGVG-VMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVP 122
Query: 505 YIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCLAPGI 564
+ +R PFK AY+ SK LLGL A DL N+RV + PG
Sbjct: 123 ALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGS 182
Query: 565 TKTKFAA 571
T FA
Sbjct: 183 VDTGFAG 189
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 80/179 (44%), Gaps = 6/179 (3%)
Query: 16 VVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAKKE 75
++T +S GIG A A+ L A+G V + +R E + L EG + G V ++
Sbjct: 9 LITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL--EGALPLPG---DVREEG 63
Query: 76 DRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQEVLP 135
D + E+ FG + LV+NA V PV E W + + N+ FL + +P
Sbjct: 64 DWARAVAAMEEAFGELSALVNNAGVG-VMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVP 122
Query: 136 YIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCLAPG 194
+ +R PFK AY+ SK LLGL A DL N+RV + PG
Sbjct: 123 ALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPG 181
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 671 PGLIRTKFGDRMIAMLSTDKLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSS 730
PG +R + GD A+ + ++ +G + LV+NA V +P+ E + W + D NL +
Sbjct: 56 PGDVREE-GDWARAVAAMEEAFGELSALVNNAGVG-VMKPVHELTLEEWRLVLDTNLTGA 113
Query: 731 FLLTQEVLPYMRKK 744
FL + +P + ++
Sbjct: 114 FLGIRHAVPALLRR 127
Score = 32.3 bits (72), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 22/44 (50%)
Query: 635 FRFIGAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
F+ AY+ SK L GL DL N+RV + PG + T F
Sbjct: 144 FKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGF 187
>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A
Putative Ketoacyl Reductase (Fabg4) From Mycobacterium
Tuberculosis H37rv At 2.5 Angstrom Resolution
pdb|3M1L|B Chain B, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A
Putative Ketoacyl Reductase (Fabg4) From Mycobacterium
Tuberculosis H37rv At 2.5 Angstrom Resolution
Length = 432
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 115/248 (46%), Gaps = 14/248 (5%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L GKVA+VT ++ GIG IA+ + +GA VV +V A E L E K+ G
Sbjct: 195 LDGKVAIVTGAARGIGATIAEVFARDGAHVV-----AIDVESAAENL-AETASKVGGTAL 248
Query: 439 --HVAKKEDRQKLFEHAEKKFGG-IDILVSNAAVNPATGPVVECPENVWDKIFEVNVKST 495
V + K+ EH GG DILV+NA + + + WD + VN+ +
Sbjct: 249 WLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDK-LLANMDDARWDAVLAVNLLAP 307
Query: 496 FLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 555
LT+ ++ +A + Y+ +K ++G+T+A+A LA++ I
Sbjct: 308 LRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGI 367
Query: 556 RVNCLAPGITKTKFAAAL-YETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYIT 614
+N +APG +T+ AA+ T E S + G+ P ++ +A+ S ++ +T
Sbjct: 368 TINAVAPGFIETQMTAAIPLATREVGRRLNSLLQGGQ---PVDVAEAIAYFASPASNAVT 424
Query: 615 GEVIVAAG 622
G VI G
Sbjct: 425 GNVIRVCG 432
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 88/188 (46%), Gaps = 10/188 (5%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L GKVA+VT ++ GIG IA+ + +GA VV +V A E L E K+ G
Sbjct: 195 LDGKVAIVTGAARGIGATIAEVFARDGAHVV-----AIDVESAAENL-AETASKVGGTAL 248
Query: 70 --HVAKKEDRQKLFEHAEKKFGG-IDILVSNAAVNPATGPVVECPENVWDKIFEVNVKST 126
V + K+ EH GG DILV+NA + + + WD + VN+ +
Sbjct: 249 WLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDK-LLANMDDARWDAVLAVNLLAP 307
Query: 127 FLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 186
LT+ ++ +A + Y+ +K ++G+T+A+A LA++ I
Sbjct: 308 LRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGI 367
Query: 187 RVNCLAPG 194
+N +APG
Sbjct: 368 TINAVAPG 375
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
Y+ +K + G+T+ +A LA + I +N +APG I T+
Sbjct: 344 YATTKAGMIGITQALAPGLAAKGITINAVAPGFIETQM 381
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 689 DKLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVL 738
D G DILV+NA + ++ L + WD + VNL + LT+ ++
Sbjct: 267 DHHGGKADILVNNAGIT-RDKLLANMDDARWDAVLAVNLLAPLRLTEGLV 315
>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme,
Phosphate And Hydroxide
Length = 244
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 107/246 (43%), Gaps = 11/246 (4%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
LAG+ +VT + GIG + L GA VV SR +++++ V I V
Sbjct: 5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC-----PGIEPVCV 59
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
+ E E A G +D+LV+NAAV P +E + +D+ FEVN+++ +
Sbjct: 60 DLGDWEAT----ERALGSVGPVDLLVNNAAV-ALLQPFLEVTKEAFDRSFEVNLRAVIQV 114
Query: 499 TQEVLPYIRKRNX-XXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 557
+Q V + R Y +K AL LTK +A +L IRV
Sbjct: 115 SQIVARGLIARGVPGAIVNVSSQXSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRV 174
Query: 558 NCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEV 617
N + P + T A + + ++ +P+G+ A + + + FL SD + TG
Sbjct: 175 NAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGST 234
Query: 618 IVAAGG 623
+ GG
Sbjct: 235 LPVEGG 240
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 82/187 (43%), Gaps = 11/187 (5%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L G+ +VT + GIG + L A GA VV SR +++++ V I V
Sbjct: 5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG-----IEPVCV 59
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
+ E E A G +D+LV+NAAV P +E + +D+ FEVN+++ +
Sbjct: 60 DLGDWEAT----ERALGSVGPVDLLVNNAAV-ALLQPFLEVTKEAFDRSFEVNLRAVIQV 114
Query: 130 TQEVLPYIRKRNX-XXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 188
+Q V + R Y +K AL LTK +A +L IRV
Sbjct: 115 SQIVARGLIARGVPGAIVNVSSQXSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRV 174
Query: 189 NCLAPGI 195
N + P +
Sbjct: 175 NAVNPTV 181
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFG 679
Y +K AL LTKV+A +L P IRVN + P ++ T G
Sbjct: 149 YCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMG 187
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 693 GGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEV 737
G +D+LV+NAAV +P +E ++ +D+ F+VNL++ ++Q V
Sbjct: 75 GPVDLLVNNAAV-ALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIV 118
>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex
pdb|3Q6I|B Chain B, Crystal Structure Of Fabg4 And Coenzyme Binary Complex
pdb|3Q6I|C Chain C, Crystal Structure Of Fabg4 And Coenzyme Binary Complex
pdb|3Q6I|D Chain D, Crystal Structure Of Fabg4 And Coenzyme Binary Complex
Length = 446
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 115/248 (46%), Gaps = 14/248 (5%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L GKVA+VT ++ GIG IA+ + +GA VV +V A E L E K+ G
Sbjct: 203 LDGKVAIVTGAARGIGATIAEVFARDGAHVV-----AIDVESAAENL-AETASKVGGTAL 256
Query: 439 --HVAKKEDRQKLFEHAEKKFGG-IDILVSNAAVNPATGPVVECPENVWDKIFEVNVKST 495
V + K+ EH GG DILV+NA + + + WD + VN+ +
Sbjct: 257 WLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDK-LLANMDDARWDAVLAVNLLAP 315
Query: 496 FLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 555
LT+ ++ +A + Y+ +K ++G+T+A+A LA++ I
Sbjct: 316 LRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGI 375
Query: 556 RVNCLAPGITKTKFAAAL-YETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYIT 614
+N +APG +T+ AA+ T E S + G+ P ++ +A+ S ++ +T
Sbjct: 376 TINAVAPGFIETQMTAAIPLATREVGRRLNSLLQGGQ---PVDVAEAIAYFASPASNAVT 432
Query: 615 GEVIVAAG 622
G VI G
Sbjct: 433 GNVIRVCG 440
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 88/188 (46%), Gaps = 10/188 (5%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L GKVA+VT ++ GIG IA+ + +GA VV +V A E L E K+ G
Sbjct: 203 LDGKVAIVTGAARGIGATIAEVFARDGAHVV-----AIDVESAAENL-AETASKVGGTAL 256
Query: 70 --HVAKKEDRQKLFEHAEKKFGG-IDILVSNAAVNPATGPVVECPENVWDKIFEVNVKST 126
V + K+ EH GG DILV+NA + + + WD + VN+ +
Sbjct: 257 WLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDK-LLANMDDARWDAVLAVNLLAP 315
Query: 127 FLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 186
LT+ ++ +A + Y+ +K ++G+T+A+A LA++ I
Sbjct: 316 LRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGI 375
Query: 187 RVNCLAPG 194
+N +APG
Sbjct: 376 TINAVAPG 383
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
Y+ +K + G+T+ +A LA + I +N +APG I T+
Sbjct: 352 YATTKAGMIGITQALAPGLAAKGITINAVAPGFIETQM 389
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 689 DKLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVL 738
D G DILV+NA + ++ L + WD + VNL + LT+ ++
Sbjct: 275 DHHGGKADILVNNAGIT-RDKLLANMDDARWDAVLAVNLLAPLRLTEGLV 323
>pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme
pdb|1PR9|B Chain B, Human L-Xylulose Reductase Holoenzyme
pdb|1WNT|A Chain A, Strucutre Of The Tetrameric Form Of Human L-Xylulose
Reductase
pdb|1WNT|B Chain B, Strucutre Of The Tetrameric Form Of Human L-Xylulose
Reductase
pdb|1WNT|C Chain C, Strucutre Of The Tetrameric Form Of Human L-Xylulose
Reductase
pdb|1WNT|D Chain D, Strucutre Of The Tetrameric Form Of Human L-Xylulose
Reductase
Length = 244
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 106/246 (43%), Gaps = 11/246 (4%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
LAG+ +VT + GIG + L GA VV SR +++++ V I V
Sbjct: 5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC-----PGIEPVCV 59
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
+ E E A G +D+LV+NAAV P +E + +D+ FEVN+++ +
Sbjct: 60 DLGDWEAT----ERALGSVGPVDLLVNNAAV-ALLQPFLEVTKEAFDRSFEVNLRAVIQV 114
Query: 499 TQEVLPYIRKRNX-XXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 557
+Q V + R Y +K AL LTK +A +L IRV
Sbjct: 115 SQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRV 174
Query: 558 NCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEV 617
N + P + T A + + ++ +P+G+ A + + + FL SD + TG
Sbjct: 175 NAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGST 234
Query: 618 IVAAGG 623
+ GG
Sbjct: 235 LPVEGG 240
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 81/187 (43%), Gaps = 11/187 (5%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L G+ +VT + GIG + L A GA VV SR +++++ V I V
Sbjct: 5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG-----IEPVCV 59
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
+ E E A G +D+LV+NAAV P +E + +D+ FEVN+++ +
Sbjct: 60 DLGDWEAT----ERALGSVGPVDLLVNNAAV-ALLQPFLEVTKEAFDRSFEVNLRAVIQV 114
Query: 130 TQEVLPYIRKRNX-XXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 188
+Q V + R Y +K AL LTK +A +L IRV
Sbjct: 115 SQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRV 174
Query: 189 NCLAPGI 195
N + P +
Sbjct: 175 NAVNPTV 181
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFG 679
Y +K AL LTKV+A +L P IRVN + P ++ T G
Sbjct: 149 YCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMG 187
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 693 GGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEV 737
G +D+LV+NAAV +P +E ++ +D+ F+VNL++ ++Q V
Sbjct: 75 GPVDLLVNNAAV-ALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIV 118
>pdb|3E9Q|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase From
Shigella Flexneri
pdb|3E9Q|B Chain B, Crystal Structure Of The Short Chain Dehydrogenase From
Shigella Flexneri
Length = 273
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 115/254 (45%), Gaps = 13/254 (5%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L ++ +VT +SDGIG A + GA+V++ R E + + + +E ++ +
Sbjct: 31 LNDRIILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 90
Query: 439 HV--AKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 496
+ E+ Q+L + + +D ++ NA + P E VW + ++NV +TF
Sbjct: 91 DLLTCTSENCQQLAQRIVVNYPRLDGVLHNAGLLGDVCPXSEQNPQVWQDVXQINVNATF 150
Query: 497 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 556
LTQ +LP + K + GAY+ SK A G + +A D + +R
Sbjct: 151 XLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGXXQVLA-DEYQQRLR 209
Query: 557 VNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGE 616
VNC+ PG T+T A+ + TE+ +L P ++ + +L DD+ TG
Sbjct: 210 VNCINPGGTRTAXRASAFPTEDPQ----------KLKTPADIXPLYLWLXGDDSRRKTGX 259
Query: 617 VIVAAGGMQSRLTK 630
A G + +++
Sbjct: 260 TFDAQPGRKPGISQ 273
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 87/187 (46%), Gaps = 3/187 (1%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L ++ +VT +SDGIG A + GA+V++ R E + + + +E ++ +
Sbjct: 31 LNDRIILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 90
Query: 70 HV--AKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 127
+ E+ Q+L + + +D ++ NA + P E VW + ++NV +TF
Sbjct: 91 DLLTCTSENCQQLAQRIVVNYPRLDGVLHNAGLLGDVCPXSEQNPQVWQDVXQINVNATF 150
Query: 128 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 187
LTQ +LP + K + GAY+ SK A G + +A D + +R
Sbjct: 151 XLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGXXQVLA-DEYQQRLR 209
Query: 188 VNCLAPG 194
VNC+ PG
Sbjct: 210 VNCINPG 216
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 639 GAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
GAY+ SK A G +V+A++ + +RVNC+ PG RT
Sbjct: 184 GAYAASKFATEGXXQVLADEYQ-QRLRVNCINPGGTRT 220
>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional
Enzyme Type 2 From Drosophila Melanogaster
Length = 613
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 116/253 (45%), Gaps = 38/253 (15%)
Query: 378 RLAGKVAVVTASSDGIGFAIAKRLSTEGASVVI-----------SSRKESNVNKAVETLQ 426
R G+VAVVT + G+G A + GA VV+ +S++ +++ V+ ++
Sbjct: 16 RYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADI--VVDEIR 73
Query: 427 KEGHQKISGVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDK 486
K G + ++ + D K+ E A K FG +DILV+NA + +V+ E W+
Sbjct: 74 KAGGEAVADYNSVI----DGAKVIETAIKAFGRVDILVNNAGI-LRDRSLVKTSEQDWNL 128
Query: 487 IFEVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGA--YSVSKTALLGLTK 544
+ +V++K +F TQ PY++K+N + + G Y+ +K L+GL
Sbjct: 129 VNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGI--YGNFGQVNYTAAKMGLIGLAN 186
Query: 545 AVAQDLASENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAF 604
VA + A N+ N + P AA TE + N +L P +VA+
Sbjct: 187 TVAIEGARNNVLCNVIVP-------TAASRMTEGILPDILFNELKPKLIAP-----VVAY 234
Query: 605 L----CSDDASYI 613
L C D+ SYI
Sbjct: 235 LCHESCEDNGSYI 247
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 96/198 (48%), Gaps = 22/198 (11%)
Query: 9 RLTGKVAVVTASSDGIGFAIAKRLSAEGASVVI-----------SSRKESNVNKAVETLQ 57
R G+VAVVT + G+G A + GA VV+ +S++ +++ V+ ++
Sbjct: 16 RYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADI--VVDEIR 73
Query: 58 KEGHQKISGVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDK 117
K G + ++ + D K+ E A K FG +DILV+NA + +V+ E W+
Sbjct: 74 KAGGEAVADYNSVI----DGAKVIETAIKAFGRVDILVNNAGI-LRDRSLVKTSEQDWNL 128
Query: 118 IFEVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGA--YSVSKTALLGLTK 175
+ +V++K +F TQ PY++K+N + + G Y+ +K L+GL
Sbjct: 129 VNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGI--YGNFGQVNYTAAKMGLIGLAN 186
Query: 176 AVAQDLASENIRVNCLAP 193
VA + A N+ N + P
Sbjct: 187 TVAIEGARNNVLCNVIVP 204
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 690 KLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKK 744
K +G +DILV+NA + + LV+ SE W+ + DV+LK SF TQ PYM+K+
Sbjct: 98 KAFGRVDILVNNAGI-LRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQ 151
>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID
Dehydrogenase
pdb|1HXH|B Chain B, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID
Dehydrogenase
pdb|1HXH|C Chain C, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID
Dehydrogenase
pdb|1HXH|D Chain D, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID
Dehydrogenase
Length = 253
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 117/248 (47%), Gaps = 19/248 (7%)
Query: 377 SRLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGV 436
+RL GKVA+VT + G+G + K L EGA V S E+ A + L E ++ V
Sbjct: 2 NRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEA----AGQQLAAELGERSMFV 57
Query: 437 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAV----NPATGPVVECPENVWDKIFEVNV 492
V+ + D + +++ G +++LV+NA + + TG + + + ++ ++N
Sbjct: 58 RHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLED-----FSRLLKINT 112
Query: 493 KSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLAS 552
+S F+ Q+ + +++ L P + YS SK A+ LT+A A
Sbjct: 113 ESVFIGCQQGIAAMKETGGSIINMASVSSWL-PIEQYAGYSASKAAVSALTRAAALSCRK 171
Query: 553 EN--IRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPM---GRLAVPDEMGGIVAFLCS 607
+ IRVN + P T A + E+ + + + GR +P+ + +V FL S
Sbjct: 172 QGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLAS 231
Query: 608 DDASYITG 615
D++S ++G
Sbjct: 232 DESSVMSG 239
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 91/192 (47%), Gaps = 16/192 (8%)
Query: 8 SRLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGV 67
+RL GKVA+VT + G+G + K L EGA V S E+ A + L E ++ V
Sbjct: 2 NRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEA----AGQQLAAELGERSMFV 57
Query: 68 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAV----NPATGPVVECPENVWDKIFEVNV 123
V+ + D + +++ G +++LV+NA + + TG + + + ++ ++N
Sbjct: 58 RHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLED-----FSRLLKINT 112
Query: 124 KSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLAS 183
+S F+ Q+ + +++ L P + YS SK A+ LT+A A
Sbjct: 113 ESVFIGCQQGIAAMKETGGSIINMASVSSWL-PIEQYAGYSASKAAVSALTRAAALSCRK 171
Query: 184 EN--IRVNCLAP 193
+ IRVN + P
Sbjct: 172 QGYAIRVNSIHP 183
>pdb|3F1K|A Chain A, Crystal Structure Of Ycik From E. Coli, An Oxidoreductase,
Complexed With Nadp+ At 2.6a Resolution
Length = 252
Score = 73.9 bits (180), Expect = 3e-13, Method: Composition-based stats.
Identities = 65/254 (25%), Positives = 115/254 (45%), Gaps = 13/254 (5%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L ++ +VT +SDGIG A + GA+V++ R E + + + +E ++ +
Sbjct: 10 LNDRIILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 69
Query: 439 HV--AKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 496
+ E+ Q+L + + +D ++ NA + P E VW + +VNV +TF
Sbjct: 70 DLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPXSEQNPQVWQDVXQVNVNATF 129
Query: 497 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 556
LTQ +LP + K + GAY+ SK A G + +A D + +R
Sbjct: 130 XLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGXXQVLA-DEYQQRLR 188
Query: 557 VNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGE 616
VNC+ PG T+T A+ + TE+ +L P ++ + +L DD+ TG
Sbjct: 189 VNCINPGGTRTAMRASAFPTEDPQ----------KLKTPADIXPLYLWLXGDDSRRKTGM 238
Query: 617 VIVAAGGMQSRLTK 630
A G + +++
Sbjct: 239 TFDAQPGRKPGISQ 252
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 51/187 (27%), Positives = 87/187 (46%), Gaps = 3/187 (1%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L ++ +VT +SDGIG A + GA+V++ R E + + + +E ++ +
Sbjct: 10 LNDRIILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 69
Query: 70 HV--AKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 127
+ E+ Q+L + + +D ++ NA + P E VW + +VNV +TF
Sbjct: 70 DLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPXSEQNPQVWQDVXQVNVNATF 129
Query: 128 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 187
LTQ +LP + K + GAY+ SK A G + +A D + +R
Sbjct: 130 XLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGXXQVLA-DEYQQRLR 188
Query: 188 VNCLAPG 194
VNC+ PG
Sbjct: 189 VNCINPG 195
Score = 34.3 bits (77), Expect = 0.26, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 639 GAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
GAY+ SK A G +V+A++ + +RVNC+ PG RT
Sbjct: 163 GAYAASKFATEGXXQVLADEYQ-QRLRVNCINPGGTRT 199
>pdb|3I1J|A Chain A, Structure Of A Putative Short Chain Dehydrogenase From
Pseudomonas Syringae
pdb|3I1J|B Chain B, Structure Of A Putative Short Chain Dehydrogenase From
Pseudomonas Syringae
Length = 247
Score = 73.9 bits (180), Expect = 3e-13, Method: Composition-based stats.
Identities = 67/245 (27%), Positives = 119/245 (48%), Gaps = 13/245 (5%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQK--ISGV 436
L G+V +VT ++ GIG A A+ + GASVV+ R E+++ + + ++ G + I +
Sbjct: 12 LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIAL 71
Query: 437 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 496
A + ++L E +FG +D L+ NA++ P+ + P+ + ++ VNV +TF
Sbjct: 72 NLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFXQVXHVNVNATF 131
Query: 497 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLAS-ENI 555
LT+ +LP +++ GAY VSK A GL + +A +L +
Sbjct: 132 XLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFATEGLXQTLADELEGVTAV 191
Query: 556 RVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITG 615
R N + PG T+T A Y E P+ A P+++ + +L D++ I G
Sbjct: 192 RANSINPGATRTGXRAQAYPDEN---------PLNNPA-PEDIXPVYLYLXGPDSTGING 241
Query: 616 EVIVA 620
+ + A
Sbjct: 242 QALNA 246
Score = 63.5 bits (153), Expect = 4e-10, Method: Composition-based stats.
Identities = 55/188 (29%), Positives = 96/188 (51%), Gaps = 3/188 (1%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQK--ISGV 67
L G+V +VT ++ GIG A A+ +A GASVV+ R E+++ + + ++ G + I +
Sbjct: 12 LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIAL 71
Query: 68 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 127
A + ++L E +FG +D L+ NA++ P+ + P+ + ++ VNV +TF
Sbjct: 72 NLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFXQVXHVNVNATF 131
Query: 128 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLAS-ENI 186
LT+ +LP +++ GAY VSK A GL + +A +L +
Sbjct: 132 XLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFATEGLXQTLADELEGVTAV 191
Query: 187 RVNCLAPG 194
R N + PG
Sbjct: 192 RANSINPG 199
Score = 32.3 bits (72), Expect = 0.92, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 33/54 (61%)
Query: 692 YGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKKK 745
+G +D L+ NA++ PL + + + ++ VN+ ++F LT+ +LP +++ +
Sbjct: 92 FGRLDGLLHNASIIGPRTPLEQLPDEDFXQVXHVNVNATFXLTRALLPLLKRSE 145
Score = 31.2 bits (69), Expect = 2.5, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 639 GAYSVSKTALFGLTKVVAEDL-APENIRVNCLAPGLIRT 676
GAY VSK A GL + +A++L +R N + PG RT
Sbjct: 165 GAYGVSKFATEGLXQTLADELEGVTAVRANSINPGATRT 203
>pdb|3BMC|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Substrate (Folate)
pdb|3BMN|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax3)
pdb|3BMO|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax4)
pdb|3BMQ|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax5)
pdb|3BMQ|D Chain D, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax5)
pdb|3JQ8|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6,7,7-
Trimethyl-7,8-Dihydropteridine-2,4-Diamine (Dx3)
pdb|3JQ8|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6,7,7-
Trimethyl-7,8-Dihydropteridine-2,4-Diamine (Dx3)
pdb|3JQ8|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6,7,7-
Trimethyl-7,8-Dihydropteridine-2,4-Diamine (Dx3)
pdb|3JQ9|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-6-(1,3-Benzodioxol-5-Yl)-4-Oxo-4,7-
Dihydro-3h-Pyrrolo[2,3-D]pyrimidine-5-Carbonitrile (Ax1)
pdb|3JQ9|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-6-(1,3-Benzodioxol-5-Yl)-4-Oxo-4,7-
Dihydro-3h-Pyrrolo[2,3-D]pyrimidine-5-Carbonitrile (Ax1)
pdb|3JQB|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-5-(2-Phenylethyl)-3,7-Dihydro-4h-
Pyrrolo[2,3-D]pyrimidin-4-One (Dx6)
pdb|3JQD|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-4-Oxo-6-Phenyl-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Dx7)
pdb|3JQD|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-4-Oxo-6-Phenyl-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Dx7)
pdb|3JQD|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-4-Oxo-6-Phenyl-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Dx7)
pdb|3JQD|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-4-Oxo-6-Phenyl-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Dx7)
pdb|3GN1|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00067116)
pdb|3GN1|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00067116)
pdb|3GN1|C Chain C, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00067116)
pdb|3GN1|D Chain D, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00067116)
pdb|2YHU|A Chain A, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Whf30
pdb|2YHU|B Chain B, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Whf30
pdb|2YHU|C Chain C, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Whf30
pdb|2YHU|D Chain D, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Whf30
Length = 288
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 120/273 (43%), Gaps = 33/273 (12%)
Query: 377 SRLAGKVAVVTASSDGIGFAIAKRLSTEGASVVIS--SRKESNVNKAVETLQKEGHQKIS 434
S + AVVT ++ IG AIA +L G VVI + E+ V+ A E L KE + +
Sbjct: 19 SHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADE-LNKE--RSNT 75
Query: 435 GVVCHVAKKEDR------QKLFEHAEKKFGGIDILVSNAAVNPATGPVVECP--ENVWDK 486
VVC +++ + FG D+LV+NA+ T P+V+ +N K
Sbjct: 76 AVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPT-PLVQGDHEDNSNGK 134
Query: 487 IFEVNVK--------STFLLTQEVLPYIRKRNXXXXXXXXXXXXLA------PFKLLGAY 532
E V + FLLT + N L P Y
Sbjct: 135 TVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLY 194
Query: 533 SVSKTALLGLTKAVAQDLASENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRL 592
++ K AL+GLT++ A +LA IRVN +APG++ A EE + VP+GR
Sbjct: 195 NMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMG----EEEKDKWRRKVPLGRR 250
Query: 593 -AVPDEMGGIVAFLCSDDASYITGEVIVAAGGM 624
A +++ V FL S A YITG +I GG+
Sbjct: 251 EASAEQIADAVIFLVSGSAQYITGSIIKVDGGL 283
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 92/212 (43%), Gaps = 28/212 (13%)
Query: 8 SRLTGKVAVVTASSDGIGFAIAKRLSAEGASVVIS--SRKESNVNKAVETLQKEGHQKIS 65
S + AVVT ++ IG AIA +L G VVI + E+ V+ A E L KE + +
Sbjct: 19 SHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADE-LNKE--RSNT 75
Query: 66 GVVCHVAKKEDR------QKLFEHAEKKFGGIDILVSNAAVNPATGPVVECP--ENVWDK 117
VVC +++ + FG D+LV+NA+ T P+V+ +N K
Sbjct: 76 AVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPT-PLVQGDHEDNSNGK 134
Query: 118 IFEVNVK--------STFLLTQEVLPYIRKRNXXXXXXXXXXXXLA------PFKLLGAY 163
E V + FLLT + N L P Y
Sbjct: 135 TVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLY 194
Query: 164 SVSKTALLGLTKAVAQDLASENIRVNCLAPGI 195
++ K AL+GLT++ A +LA IRVN +APG+
Sbjct: 195 NMGKHALVGLTQSAALELAPYGIRVNGVAPGV 226
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGL 673
Y++ K AL GLT+ A +LAP IRVN +APG+
Sbjct: 194 YNMGKHALVGLTQSAALELAPYGIRVNGVAPGV 226
>pdb|3BMC|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Substrate (Folate)
pdb|3BMC|C Chain C, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Substrate (Folate)
pdb|3BMC|D Chain D, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Substrate (Folate)
pdb|3BMN|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax3)
pdb|3BMN|C Chain C, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax3)
pdb|3BMN|D Chain D, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax3)
pdb|3BMO|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax4)
pdb|3BMO|C Chain C, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax4)
pdb|3BMO|D Chain D, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax4)
pdb|3BMQ|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax5)
pdb|3BMQ|C Chain C, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Compound Ax5)
pdb|3JQ6|A Chain A, Crystal Structure Of Pteridine Reductase 1 (ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(nadp+) And Inhibitor 6,7-
Bis(1-methylethyl)pteridine-2,4-diamine (dx1)
pdb|3JQ6|B Chain B, Crystal Structure Of Pteridine Reductase 1 (ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(nadp+) And Inhibitor 6,7-
Bis(1-methylethyl)pteridine-2,4-diamine (dx1)
pdb|3JQ6|C Chain C, Crystal Structure Of Pteridine Reductase 1 (ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(nadp+) And Inhibitor 6,7-
Bis(1-methylethyl)pteridine-2,4-diamine (dx1)
pdb|3JQ6|D Chain D, Crystal Structure Of Pteridine Reductase 1 (ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(nadp+) And Inhibitor 6,7-
Bis(1-methylethyl)pteridine-2,4-diamine (dx1)
pdb|3JQ8|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6,7,7-
Trimethyl-7,8-Dihydropteridine-2,4-Diamine (Dx3)
pdb|3JQ9|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-6-(1,3-Benzodioxol-5-Yl)-4-Oxo-4,7-
Dihydro-3h-Pyrrolo[2,3-D]pyrimidine-5-Carbonitrile (Ax1)
pdb|3JQ9|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-6-(1,3-Benzodioxol-5-Yl)-4-Oxo-4,7-
Dihydro-3h-Pyrrolo[2,3-D]pyrimidine-5-Carbonitrile (Ax1)
pdb|3JQA|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-1,9-Dihydro-6h-Purine-6-Thione (Dx4)
pdb|3JQB|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-5-(2-Phenylethyl)-3,7-Dihydro-4h-
Pyrrolo[2,3-D]pyrimidin-4-One (Dx6)
pdb|3JQB|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-5-(2-Phenylethyl)-3,7-Dihydro-4h-
Pyrrolo[2,3-D]pyrimidin-4-One (Dx6)
pdb|3JQB|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor
2-Amino-5-(2-Phenylethyl)-3,7-Dihydro-4h-
Pyrrolo[2,3-D]pyrimidin-4-One (Dx6)
pdb|3JQC|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-Bromo-4-Oxo-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Ju2)
pdb|3JQC|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-Bromo-4-Oxo-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Ju2)
pdb|3JQC|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-Bromo-4-Oxo-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Ju2)
pdb|3JQC|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-Bromo-4-Oxo-4,7-Dihydro-3h-Pyrrolo[2,
3-D]pyrimidine-5- Carbonitrile (Ju2)
pdb|3JQE|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-(4-Methoxyphenyl)-4-Oxo-4,
7-Dihydro-3h-Pyrrolo[2,3- D]pyrimidine-5-Carbonitrile
(Dx8)
pdb|3JQE|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-(4-Methoxyphenyl)-4-Oxo-4,
7-Dihydro-3h-Pyrrolo[2,3- D]pyrimidine-5-Carbonitrile
(Dx8)
pdb|3JQE|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-(4-Methoxyphenyl)-4-Oxo-4,
7-Dihydro-3h-Pyrrolo[2,3- D]pyrimidine-5-Carbonitrile
(Dx8)
pdb|3JQE|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-6-(4-Methoxyphenyl)-4-Oxo-4,
7-Dihydro-3h-Pyrrolo[2,3- D]pyrimidine-5-Carbonitrile
(Dx8)
pdb|3JQF|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 1,3,5- Triazine-2,4,6-Triamine
(Ax2)
pdb|3JQF|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 1,3,5- Triazine-2,4,6-Triamine
(Ax2)
pdb|3JQF|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 1,3,5- Triazine-2,4,6-Triamine
(Ax2)
pdb|3JQG|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6-[(4-
Methoxybenzyl)sulfanyl]pyrimidine-2,4-Diamine (Ax6)
pdb|3JQG|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6-[(4-
Methoxybenzyl)sulfanyl]pyrimidine-2,4-Diamine (Ax6)
pdb|3GN2|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00066730)
pdb|3GN2|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00066730)
pdb|3GN2|C Chain C, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00066730)
pdb|3GN2|D Chain D, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma
Brucei In Ternary Complex With Cofactor (Nadp+) And
Inhibitor (Ddd00066730)
pdb|3MCV|A Chain A, Structure Of Ptr1 From Trypanosoma Brucei In Ternary
Complex With 2,4-
Diamino-5-[2-(2,5-Dimethoxyphenyl)ethyl]thieno[2,
3-D]-Pyrimidine And Nadp+
pdb|3MCV|B Chain B, Structure Of Ptr1 From Trypanosoma Brucei In Ternary
Complex With 2,4-
Diamino-5-[2-(2,5-Dimethoxyphenyl)ethyl]thieno[2,
3-D]-Pyrimidine And Nadp+
pdb|3MCV|C Chain C, Structure Of Ptr1 From Trypanosoma Brucei In Ternary
Complex With 2,4-
Diamino-5-[2-(2,5-Dimethoxyphenyl)ethyl]thieno[2,
3-D]-Pyrimidine And Nadp+
pdb|3MCV|D Chain D, Structure Of Ptr1 From Trypanosoma Brucei In Ternary
Complex With 2,4-
Diamino-5-[2-(2,5-Dimethoxyphenyl)ethyl]thieno[2,
3-D]-Pyrimidine And Nadp+
pdb|2X9G|A Chain A, High Resolution Structure Of Tbptr1 In Complex With
Pemetrexed
pdb|2X9G|B Chain B, High Resolution Structure Of Tbptr1 In Complex With
Pemetrexed
pdb|2X9G|C Chain C, High Resolution Structure Of Tbptr1 In Complex With
Pemetrexed
pdb|2X9G|D Chain D, High Resolution Structure Of Tbptr1 In Complex With
Pemetrexed
pdb|2X9V|A Chain A, High Resolution Structure Of Tbptr1 With Trimetrexate
pdb|2X9V|B Chain B, High Resolution Structure Of Tbptr1 With Trimetrexate
pdb|2X9V|C Chain C, High Resolution Structure Of Tbptr1 With Trimetrexate
pdb|2X9V|D Chain D, High Resolution Structure Of Tbptr1 With Trimetrexate
pdb|2X9N|A Chain A, High Resolution Structure Of Tbptr1 In Complex With
Cyromazine
pdb|2X9N|B Chain B, High Resolution Structure Of Tbptr1 In Complex With
Cyromazine
pdb|2X9N|C Chain C, High Resolution Structure Of Tbptr1 In Complex With
Cyromazine
pdb|2X9N|D Chain D, High Resolution Structure Of Tbptr1 In Complex With
Cyromazine
pdb|2YHI|B Chain B, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Wh16
pdb|2YHI|D Chain D, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Wh16
Length = 288
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 120/273 (43%), Gaps = 33/273 (12%)
Query: 377 SRLAGKVAVVTASSDGIGFAIAKRLSTEGASVVIS--SRKESNVNKAVETLQKEGHQKIS 434
S + AVVT ++ IG AIA +L G VVI + E+ V+ A E L KE + +
Sbjct: 19 SHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADE-LNKE--RSNT 75
Query: 435 GVVCHVAKKEDR------QKLFEHAEKKFGGIDILVSNAAVNPATGPVVECP--ENVWDK 486
VVC +++ + FG D+LV+NA+ T P+V+ +N K
Sbjct: 76 AVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPT-PLVQGDHEDNSNGK 134
Query: 487 IFEVNVK--------STFLLTQEVLPYIRKRNXXXXXXXXXXXXLA------PFKLLGAY 532
E V + FLLT + N L P Y
Sbjct: 135 TVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLY 194
Query: 533 SVSKTALLGLTKAVAQDLASENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRL 592
++ K AL+GLT++ A +LA IRVN +APG++ A EE + VP+GR
Sbjct: 195 NMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMG----EEEKDKWRRKVPLGRR 250
Query: 593 -AVPDEMGGIVAFLCSDDASYITGEVIVAAGGM 624
A +++ V FL S A YITG +I GG+
Sbjct: 251 EASAEQIADAVIFLVSGSAQYITGSIIKVDGGL 283
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 92/212 (43%), Gaps = 28/212 (13%)
Query: 8 SRLTGKVAVVTASSDGIGFAIAKRLSAEGASVVIS--SRKESNVNKAVETLQKEGHQKIS 65
S + AVVT ++ IG AIA +L G VVI + E+ V+ A E L KE + +
Sbjct: 19 SHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADE-LNKE--RSNT 75
Query: 66 GVVCHVAKKEDR------QKLFEHAEKKFGGIDILVSNAAVNPATGPVVECP--ENVWDK 117
VVC +++ + FG D+LV+NA+ T P+V+ +N K
Sbjct: 76 AVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPT-PLVQGDHEDNSNGK 134
Query: 118 IFEVNVK--------STFLLTQEVLPYIRKRNXXXXXXXXXXXXLA------PFKLLGAY 163
E V + FLLT + N L P Y
Sbjct: 135 TVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLY 194
Query: 164 SVSKTALLGLTKAVAQDLASENIRVNCLAPGI 195
++ K AL+GLT++ A +LA IRVN +APG+
Sbjct: 195 NMGKHALVGLTQSAALELAPYGIRVNGVAPGV 226
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGL 673
Y++ K AL GLT+ A +LAP IRVN +APG+
Sbjct: 194 YNMGKHALVGLTQSAALELAPYGIRVNGVAPGV 226
>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium
Meliloti 1021
pdb|3UN1|B Chain B, Crystal Structure Of An Oxidoreductase From Sinorhizobium
Meliloti 1021
pdb|3UN1|C Chain C, Crystal Structure Of An Oxidoreductase From Sinorhizobium
Meliloti 1021
pdb|3UN1|D Chain D, Crystal Structure Of An Oxidoreductase From Sinorhizobium
Meliloti 1021
Length = 260
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 108/250 (43%), Gaps = 26/250 (10%)
Query: 382 KVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 441
KV V+T +S GIG + + VV +SR +++ I V ++
Sbjct: 29 KVVVITGASQGIGAGLVRAYRDRNYRVVATSR----------SIKPSADPDIHTVAGDIS 78
Query: 442 KKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 501
K E ++ ++FG ID LV+NA V A P VE + +D VNV F +TQ
Sbjct: 79 KPETADRIVREGIERFGRIDSLVNNAGVFLAK-PFVEXTQEDYDHNLGVNVAGFFHITQR 137
Query: 502 VLPYIRKRNXXXXXXXXXXXXLAPFKLLGA----YSVSKTALLGLTKAVAQDLASENIRV 557
K+ P +G S++K L +T+++A + + +RV
Sbjct: 138 AAAEXLKQGSGHIVSITTSLVDQP--XVGXPSALASLTKGGLNAVTRSLAXEFSRSGVRV 195
Query: 558 NCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIV-AFLCSDDASYITGE 616
N ++PG+ KT A E H P+GR E+ +V A L + A +ITGE
Sbjct: 196 NAVSPGVIKTPXHPA-----ETHSTLAGLHPVGRXG---EIRDVVDAVLYLEHAGFITGE 247
Query: 617 VIVAAGGMQS 626
++ GG +
Sbjct: 248 ILHVDGGQNA 257
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 81/187 (43%), Gaps = 17/187 (9%)
Query: 13 KVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 72
KV V+T +S GIG + + VV +SR +++ I V ++
Sbjct: 29 KVVVITGASQGIGAGLVRAYRDRNYRVVATSR----------SIKPSADPDIHTVAGDIS 78
Query: 73 KKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 132
K E ++ ++FG ID LV+NA V A P VE + +D VNV F +TQ
Sbjct: 79 KPETADRIVREGIERFGRIDSLVNNAGVFLAK-PFVEXTQEDYDHNLGVNVAGFFHITQR 137
Query: 133 VLPYIRKRNXXXXXXXXXXXXLAPFKLLGA----YSVSKTALLGLTKAVAQDLASENIRV 188
K+ P +G S++K L +T+++A + + +RV
Sbjct: 138 AAAEXLKQGSGHIVSITTSLVDQP--XVGXPSALASLTKGGLNAVTRSLAXEFSRSGVRV 195
Query: 189 NCLAPGI 195
N ++PG+
Sbjct: 196 NAVSPGV 202
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 24/35 (68%)
Query: 642 SVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
S++K L +T+ +A + + +RVN ++PG+I+T
Sbjct: 171 SLTKGGLNAVTRSLAXEFSRSGVRVNAVSPGVIKT 205
>pdb|3SVT|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE
FROM Mycobacterium Ulcerans
pdb|3SVT|B Chain B, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE
FROM Mycobacterium Ulcerans
Length = 281
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 97/225 (43%), Gaps = 6/225 (2%)
Query: 407 SVVISSRKESNVNKAVETLQKEGHQKISGVVCH----VAKKEDRQKLFEHAEKKFGGIDI 462
SV+I R + AV+ L+ G G + + + +++ + + G +
Sbjct: 37 SVMIVGRNPDKLAGAVQELEALGAN--GGAIRYEPTDITNEDETARAVDAVTAWHGRLHG 94
Query: 463 LVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXX 522
+V A + GP+ + W + ++NV T + + + +
Sbjct: 95 VVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAA 154
Query: 523 LAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCLAPGITKTKFAAALYETEEAHEI 582
+ GAY V+K+A+ L + A +L + +RVN + PG+ +T AA+ E+ E
Sbjct: 155 SNTHRWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSD 214
Query: 583 AVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVIVAAGGMQSR 627
P+ R +++ + FL SD AS++TG+VI GG R
Sbjct: 215 YAMCTPLPRQGEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLR 259
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 636 RFIGAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
R+ GAY V+K+A+ L ++ A++L +RVN + PGLIRT
Sbjct: 159 RWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDL 201
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/162 (19%), Positives = 66/162 (40%), Gaps = 6/162 (3%)
Query: 38 SVVISSRKESNVNKAVETLQKEGHQKISGVVCH----VAKKEDRQKLFEHAEKKFGGIDI 93
SV+I R + AV+ L+ G G + + + +++ + + G +
Sbjct: 37 SVMIVGRNPDKLAGAVQELEALGAN--GGAIRYEPTDITNEDETARAVDAVTAWHGRLHG 94
Query: 94 LVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXX 153
+V A + GP+ + W + ++NV T + + + +
Sbjct: 95 VVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAA 154
Query: 154 LAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCLAPGI 195
+ GAY V+K+A+ L + A +L + +RVN + PG+
Sbjct: 155 SNTHRWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGL 196
>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From
Mycobacterium Paratuberculosis Bound To Nicotinamide
Adenine Dinucleotide
pdb|3PGX|B Chain B, Crystal Structure Of A Putative Carveol Dehydrogenase From
Mycobacterium Paratuberculosis Bound To Nicotinamide
Adenine Dinucleotide
pdb|3PGX|C Chain C, Crystal Structure Of A Putative Carveol Dehydrogenase From
Mycobacterium Paratuberculosis Bound To Nicotinamide
Adenine Dinucleotide
pdb|3PGX|D Chain D, Crystal Structure Of A Putative Carveol Dehydrogenase From
Mycobacterium Paratuberculosis Bound To Nicotinamide
Adenine Dinucleotide
Length = 280
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 114/267 (42%), Gaps = 23/267 (8%)
Query: 373 AVNASRLAGKVAVVTASSDGIGFAIAKRLSTEG-------------ASVVISSRKESNVN 419
A A L G+VA +T ++ G G + A RL+ EG ASV + +++
Sbjct: 7 AGQAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLD 66
Query: 420 KAVETLQKEGHQKISGVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVEC 479
+ ++ +G + ++ V+ V ++L ++FG +D++V+NA V + G V E
Sbjct: 67 ETARLVEDQGRKALTRVL-DVRDDAALRELVADGMEQFGRLDVVVANAGVL-SWGRVWEL 124
Query: 480 PENVWDKIFEVNVKSTFLLTQEVLP-YIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTA 538
+ WD + VN+ T+ + +P I N L G YS SK
Sbjct: 125 TDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHG 184
Query: 539 LLGLTKAVAQDLASENIRVNCLAPGITKTKF--AAALYETEEAHEIAVSNVP-----MGR 591
L LT +A +L IRVN + P +T A+ E H V + P
Sbjct: 185 LTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPNG 244
Query: 592 LAVPDEMGGIVAFLCSDDASYITGEVI 618
DE+ +VA+L D + +TG I
Sbjct: 245 FMTADEVADVVAWLAGDGSGTLTGTQI 271
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 16/204 (7%)
Query: 4 AVNASRLTGKVAVVTASSDGIGFAIAKRLSAEG-------------ASVVISSRKESNVN 50
A A L G+VA +T ++ G G + A RL+AEG ASV + +++
Sbjct: 7 AGQAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLD 66
Query: 51 KAVETLQKEGHQKISGVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVEC 110
+ ++ +G + ++ V+ V ++L ++FG +D++V+NA V + G V E
Sbjct: 67 ETARLVEDQGRKALTRVL-DVRDDAALRELVADGMEQFGRLDVVVANAGVL-SWGRVWEL 124
Query: 111 PENVWDKIFEVNVKSTFLLTQEVLP-YIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTA 169
+ WD + VN+ T+ + +P I N L G YS SK
Sbjct: 125 TDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHG 184
Query: 170 LLGLTKAVAQDLASENIRVNCLAP 193
L LT +A +L IRVN + P
Sbjct: 185 LTALTNTLAIELGEYGIRVNSIHP 208
Score = 30.0 bits (66), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 20/40 (50%)
Query: 639 GAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
G YS SK L LT +A +L IRVN + P + T
Sbjct: 176 GHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPM 215
>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium
Smegmatis
Length = 454
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 116/248 (46%), Gaps = 14/248 (5%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISG--V 436
L GKVAVVT ++ GIG IA+ + +GA+VV +V+ A E L++ K+ G +
Sbjct: 211 LDGKVAVVTGAARGIGATIAEVFARDGATVV-----AIDVDGAAEDLKRV-ADKVGGTAL 264
Query: 437 VCHVAKKEDRQKLFEHAEKKFGG-IDILVSNAAVNPATGPVVECPENVWDKIFEVNVKST 495
V + K+ H + GG +DILV+NA + + E WD + VN+ +
Sbjct: 265 TLDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDK-LLANMDEKRWDAVIAVNLLAP 323
Query: 496 FLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 555
LT+ ++ +A + Y+ +K ++GL +A+A LA + I
Sbjct: 324 QRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAPVLADKGI 383
Query: 556 RVNCLAPGITKTKFAAAL-YETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYIT 614
+N +APG +TK A+ T E S G+ P ++ ++A+ S ++ +T
Sbjct: 384 TINAVAPGFIETKMTEAIPLATREVGRRLNSLFQGGQ---PVDVAELIAYFASPASNAVT 440
Query: 615 GEVIVAAG 622
G I G
Sbjct: 441 GNTIRVCG 448
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 91/188 (48%), Gaps = 10/188 (5%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISG--V 67
L GKVAVVT ++ GIG IA+ + +GA+VV +V+ A E L++ K+ G +
Sbjct: 211 LDGKVAVVTGAARGIGATIAEVFARDGATVV-----AIDVDGAAEDLKRV-ADKVGGTAL 264
Query: 68 VCHVAKKEDRQKLFEHAEKKFGG-IDILVSNAAVNPATGPVVECPENVWDKIFEVNVKST 126
V + K+ H + GG +DILV+NA + + E WD + VN+ +
Sbjct: 265 TLDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDK-LLANMDEKRWDAVIAVNLLAP 323
Query: 127 FLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 186
LT+ ++ +A + Y+ +K ++GL +A+A LA + I
Sbjct: 324 QRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAPVLADKGI 383
Query: 187 RVNCLAPG 194
+N +APG
Sbjct: 384 TINAVAPG 391
>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida
Tropicalis Peroxisomal Multifunctional Enzyme Type 2
Length = 604
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 112/245 (45%), Gaps = 19/245 (7%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L KV ++T + G+G AK + GA VV++ K++ K V+ ++ G +
Sbjct: 320 LKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDAT--KTVDEIKAAGGEAWPDQ-H 376
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
VAK D + + ++ K+G IDILV+NA + + + WD + +V++ TF L
Sbjct: 377 DVAK--DSEAIIKNVIDKYGTIDILVNNAGI-LRDRSFAKMSKQEWDSVQQVHLIGTFNL 433
Query: 499 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 558
++ PY ++ + YS SK +LGL+K +A + A NI+VN
Sbjct: 434 SRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVN 493
Query: 559 CLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVI 618
+AP E A +++ L D++ ++ +L +DD +TGE
Sbjct: 494 IVAP------------HAETAMTLSIMREQDKNLYHADQVAPLLVYLGTDDVP-VTGETF 540
Query: 619 VAAGG 623
GG
Sbjct: 541 EIGGG 545
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 90/184 (48%), Gaps = 6/184 (3%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L KV ++T + G+G AK + GA VV++ K++ K V+ ++ G +
Sbjct: 320 LKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDAT--KTVDEIKAAGGEAWPDQ-H 376
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
VAK D + + ++ K+G IDILV+NA + + + WD + +V++ TF L
Sbjct: 377 DVAK--DSEAIIKNVIDKYGTIDILVNNAGI-LRDRSFAKMSKQEWDSVQQVHLIGTFNL 433
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
++ PY ++ + YS SK +LGL+K +A + A NI+VN
Sbjct: 434 SRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVN 493
Query: 190 CLAP 193
+AP
Sbjct: 494 IVAP 497
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 111/252 (44%), Gaps = 19/252 (7%)
Query: 382 KVAVVTASSDGIGFAIAKRLSTEGASVVISS-----RKESNVNKAVETLQKEGHQKISGV 436
KV ++T + G+G + + GA VV++ + +KA + + E +
Sbjct: 9 KVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA 68
Query: 437 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 496
V D K+ E A K FG + ++++NA + + + E + + +V++ F
Sbjct: 69 VADYNNVLDGDKIVETAVKNFGTVHVIINNAGI-LRDASMKKMTEKDYKLVIDVHLNGAF 127
Query: 497 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 556
+T+ PY +K+ L Y+ +K+ALLG + +A++ A NI+
Sbjct: 128 AVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSALLGFAETLAKEGAKYNIK 187
Query: 557 VNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGE 616
N +AP + +++ ++ PM P+++ +V +L S + + +TG+
Sbjct: 188 ANAIAP-LARSRMTESIMPP-----------PMLEKLGPEKVAPLVLYLSSAE-NELTGQ 234
Query: 617 VIVAAGGMQSRL 628
A G +++
Sbjct: 235 FFEVAAGFYAQI 246
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 83/186 (44%), Gaps = 6/186 (3%)
Query: 13 KVAVVTASSDGIGFAIAKRLSAEGASVVISS-----RKESNVNKAVETLQKEGHQKISGV 67
KV ++T + G+G + + GA VV++ + +KA + + E +
Sbjct: 9 KVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA 68
Query: 68 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 127
V D K+ E A K FG + ++++NA + + + E + + +V++ F
Sbjct: 69 VADYNNVLDGDKIVETAVKNFGTVHVIINNAGI-LRDASMKKMTEKDYKLVIDVHLNGAF 127
Query: 128 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 187
+T+ PY +K+ L Y+ +K+ALLG + +A++ A NI+
Sbjct: 128 AVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSALLGFAETLAKEGAKYNIK 187
Query: 188 VNCLAP 193
N +AP
Sbjct: 188 ANAIAP 193
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 692 YGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKKK 745
YG IDILV+NA + + + S+ WD + V+L +F L++ PY +K+
Sbjct: 393 YGTIDILVNNAGI-LRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQ 445
Score = 33.1 bits (74), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAP 671
YS SK + GL+K +A + A NI+VN +AP
Sbjct: 467 YSSSKAGILGLSKTMAIEGAKNNIKVNIVAP 497
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 679 GDRMIAMLSTDKLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVL 738
GD+++ + K +G + ++++NA + + + + +E + + DV+L +F +T+
Sbjct: 78 GDKIVE--TAVKNFGTVHVIINNAGI-LRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAW 134
Query: 739 PYMRKKK 745
PY +K+K
Sbjct: 135 PYFQKQK 141
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGDRMI 683
Y+ +K+AL G + +A++ A NI+ N +AP L R++ + ++
Sbjct: 163 YASAKSALLGFAETLAKEGAKYNIKANAIAP-LARSRMTESIM 204
>pdb|2WD7|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066750
pdb|2WD8|A Chain A, Pteridine Reductase 1 (ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00071204
pdb|2WD8|B Chain B, Pteridine Reductase 1 (ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00071204
pdb|2WD8|C Chain C, Pteridine Reductase 1 (ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00071204
pdb|2WD8|D Chain D, Pteridine Reductase 1 (ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00071204
pdb|2VZ0|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066641
pdb|2VZ0|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066641
pdb|2VZ0|C Chain C, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066641
pdb|2VZ0|D Chain D, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066641
Length = 268
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 118/266 (44%), Gaps = 33/266 (12%)
Query: 384 AVVTASSDGIGFAIAKRLSTEGASVVIS--SRKESNVNKAVETLQKEGHQKISGVVCHVA 441
AVVT ++ IG AIA +L G VVI + E+ V+ A E L KE + + VVC
Sbjct: 6 AVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADE-LNKE--RSNTAVVCQAD 62
Query: 442 KKEDR------QKLFEHAEKKFGGIDILVSNAAVNPATGPVVECP--ENVWDKIFEVNVK 493
+++ + FG D+LV+NA+ T P+V+ +N K E V
Sbjct: 63 LTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPT-PLVQGDHEDNSNGKTVETQVA 121
Query: 494 --------STFLLTQEVLPYIRKRNXXXXXXXXXXXXLA------PFKLLGAYSVSKTAL 539
+ FLLT + N L P Y++ K AL
Sbjct: 122 ELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHAL 181
Query: 540 LGLTKAVAQDLASENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRL-AVPDEM 598
+GLT++ A +LA IRVN +APG++ A EE + VP+GR A +++
Sbjct: 182 VGLTQSAALELAPYGIRVNGVAPGVSLLPVAMG----EEEKDKWRRKVPLGRREASAEQI 237
Query: 599 GGIVAFLCSDDASYITGEVIVAAGGM 624
V FL S A YITG +I GG+
Sbjct: 238 ADAVIFLVSGSAQYITGSIIKVDGGL 263
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 90/205 (43%), Gaps = 28/205 (13%)
Query: 15 AVVTASSDGIGFAIAKRLSAEGASVVIS--SRKESNVNKAVETLQKEGHQKISGVVCHVA 72
AVVT ++ IG AIA +L G VVI + E+ V+ A E L KE + + VVC
Sbjct: 6 AVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADE-LNKE--RSNTAVVCQAD 62
Query: 73 KKEDR------QKLFEHAEKKFGGIDILVSNAAVNPATGPVVECP--ENVWDKIFEVNVK 124
+++ + FG D+LV+NA+ T P+V+ +N K E V
Sbjct: 63 LTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPT-PLVQGDHEDNSNGKTVETQVA 121
Query: 125 --------STFLLTQEVLPYIRKRNXXXXXXXXXXXXLA------PFKLLGAYSVSKTAL 170
+ FLLT + N L P Y++ K AL
Sbjct: 122 ELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHAL 181
Query: 171 LGLTKAVAQDLASENIRVNCLAPGI 195
+GLT++ A +LA IRVN +APG+
Sbjct: 182 VGLTQSAALELAPYGIRVNGVAPGV 206
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGL 673
Y++ K AL GLT+ A +LAP IRVN +APG+
Sbjct: 174 YNMGKHALVGLTQSAALELAPYGIRVNGVAPGV 206
>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase
pdb|2BGK|B Chain B, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase
pdb|2BGL|A Chain A, X-Ray Structure Of Binary-Secoisolariciresinol
Dehydrogenase
pdb|2BGM|A Chain A, X-Ray Structure Of Ternary-Secoisolariciresinol
Dehydrogenase
Length = 278
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 121/265 (45%), Gaps = 11/265 (4%)
Query: 364 STSTKIMSTAVNASRLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVE 423
STST ST +RL KVA++T + GIG AK GA VVI+ + + K
Sbjct: 3 STSTPDSST----NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCN 58
Query: 424 TLQKEGHQKISGVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATG-PVVECPEN 482
+ IS V C V K ED + L + K G +DI+ N V T ++E
Sbjct: 59 NIGSP--DVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNE 116
Query: 483 VWDKIFEVNVKSTFLLTQEVLP-YIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLG 541
+ ++ ++NV FL+ + I + A + Y+ +K A+LG
Sbjct: 117 DFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLG 176
Query: 542 LTKAVAQDLASENIRVNCLAPGITKTKFAAALY--ETEEAHEIAVSNVPM-GRLAVPDEM 598
LT ++ +L IRVNC++P I + ++ ++ E+A + G L +++
Sbjct: 177 LTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDV 236
Query: 599 GGIVAFLCSDDASYITGEVIVAAGG 623
VA+L D++ Y++G +V GG
Sbjct: 237 ADAVAYLAGDESKYVSGLNLVIDGG 261
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 86/190 (45%), Gaps = 4/190 (2%)
Query: 8 SRLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGV 67
+RL KVA++T + GIG AK GA VVI+ + + K + IS V
Sbjct: 12 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP--DVISFV 69
Query: 68 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATG-PVVECPENVWDKIFEVNVKST 126
C V K ED + L + K G +DI+ N V T ++E + ++ ++NV
Sbjct: 70 HCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGA 129
Query: 127 FLLTQEVLP-YIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASEN 185
FL+ + I + A + Y+ +K A+LGLT ++ +L
Sbjct: 130 FLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYG 189
Query: 186 IRVNCLAPGI 195
IRVNC++P I
Sbjct: 190 IRVNCVSPYI 199
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLI 674
Y+ +K A+ GLT + +L IRVNC++P ++
Sbjct: 167 YTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIV 200
>pdb|3UXY|A Chain A, The Crystal Structure Of Short Chain Dehydrogenase From
Rhodobacter Sphaeroides
pdb|3UXY|B Chain B, The Crystal Structure Of Short Chain Dehydrogenase From
Rhodobacter Sphaeroides
pdb|3UXY|C Chain C, The Crystal Structure Of Short Chain Dehydrogenase From
Rhodobacter Sphaeroides
pdb|3UXY|D Chain D, The Crystal Structure Of Short Chain Dehydrogenase From
Rhodobacter Sphaeroides
Length = 266
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 6/172 (3%)
Query: 457 FGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQEVLPYIRKRNXXXXXX 516
G +DI+V+NA V + G + E + W VNV++ F + + +P
Sbjct: 92 LGRLDIVVNNAGVI-SRGRITETTDADWSLSLGVNVEAPFRICRAAIPLXAAAGGGAIVN 150
Query: 517 XXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCLAPG-----ITKTKFAA 571
L P Y ++K AL LT+ D A + IR+N + P +T FA
Sbjct: 151 VASCWGLRPGPGHALYCLTKAALASLTQCXGXDHAPQGIRINAVCPNEVNTPXLRTGFAK 210
Query: 572 ALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVIVAAGG 623
++ + A VP+GR+A P+++ +V FL SD A Y+ G ++ GG
Sbjct: 211 RGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLASDAARYLCGSLVEVNGG 262
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 13/182 (7%)
Query: 12 GKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHV 71
GKVA+VT ++ GIG A+ L A + + + ++AV + + H + G +
Sbjct: 28 GKVALVTGAAGGIGGAVVTALRA-------AGARVAVADRAVAGIAADLH--LPGDLREA 78
Query: 72 AKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQ 131
A + L G +DI+V+NA V + G + E + W VNV++ F + +
Sbjct: 79 AYAD---GLPGAVAAGLGRLDIVVNNAGVI-SRGRITETTDADWSLSLGVNVEAPFRICR 134
Query: 132 EVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCL 191
+P L P Y ++K AL LT+ D A + IR+N +
Sbjct: 135 AAIPLXAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCXGXDHAPQGIRINAV 194
Query: 192 AP 193
P
Sbjct: 195 CP 196
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPG-----LIRTKFGDR 681
Y ++K AL LT+ D AP+ IR+N + P +RT F R
Sbjct: 166 YCLTKAALASLTQCXGXDHAPQGIRINAVCPNEVNTPXLRTGFAKR 211
>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
pdb|3RKU|B Chain B, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
pdb|3RKU|C Chain C, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
pdb|3RKU|D Chain D, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
Length = 287
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 114/254 (44%), Gaps = 18/254 (7%)
Query: 376 ASRLAGKVAVVTASSDGIGFAIAKRL---STEGASVVISSRKESNVNKAVETLQKEGHQK 432
A RLA K ++T +S GIG A A S +++++R+ + +E L+K Q+
Sbjct: 28 AERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRL----EKLEELKKTIDQE 83
Query: 433 ISGVVCHVAKKEDRQK-----LFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKI 487
HVA+ + Q E+ ++F IDILV+NA + V + +
Sbjct: 84 FPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDV 143
Query: 488 FEVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVA 547
F+ NV + +TQ VLP + +N + Y SK A+ T ++
Sbjct: 144 FDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLR 203
Query: 548 QDLASENIRVNCLAPGITKTKFAAALYE--TEEAHEIAVSNVPMGRLAVPDEMGGIVAFL 605
++L + IRV +APG+ +T+F+ Y E+A + P+ + D++ ++ +
Sbjct: 204 KELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTTPL----MADDVADLIVYA 259
Query: 606 CSDDASYITGEVIV 619
S + + + ++
Sbjct: 260 TSRKQNTVIADTLI 273
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 12/197 (6%)
Query: 7 ASRLTGKVAVVTASSDGIGFAIA-KRLSAEGAS--VVISSRKESNVNKAVETLQKEGHQK 63
A RL K ++T +S GIG A A + L A +++++R+ + +E L+K Q+
Sbjct: 28 AERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRL----EKLEELKKTIDQE 83
Query: 64 ISGVVCHVAKKEDRQK-----LFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKI 118
HVA+ + Q E+ ++F IDILV+NA + V + +
Sbjct: 84 FPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDV 143
Query: 119 FEVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVA 178
F+ NV + +TQ VLP + +N + Y SK A+ T ++
Sbjct: 144 FDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLR 203
Query: 179 QDLASENIRVNCLAPGI 195
++L + IRV +APG+
Sbjct: 204 KELINTKIRVILIAPGL 220
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
Y SK A+ T + ++L IRV +APGL+ T+F
Sbjct: 188 YCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEF 225
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 692 YGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKK 744
+ IDILV+NA ++ + + + +FD N+ + +TQ VLP + K
Sbjct: 113 FKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAK 165
>pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein
pdb|3P19|B Chain B, Improved Nadph-Dependent Blue Fluorescent Protein
pdb|3P19|C Chain C, Improved Nadph-Dependent Blue Fluorescent Protein
pdb|3P19|D Chain D, Improved Nadph-Dependent Blue Fluorescent Protein
Length = 266
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 8/247 (3%)
Query: 382 KVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 441
K+ V+T +S GIG AIA+R S EG +++ +R+ VE L+ V
Sbjct: 17 KLVVITGASSGIGEAIARRFSEEGHPLLLLARR-------VERLKALNLPNTLCAQVDVT 69
Query: 442 KKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 501
K AEK +G D +V+NA + G + N W ++F+VNV Q
Sbjct: 70 DKYTFDTAITRAEKIYGPADAIVNNAGMM-LLGQIDTQEANEWQRMFDVNVLGLLNGMQA 128
Query: 502 VLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCLA 561
VL ++ RN F AY +K A+ +++ V +++A+ N+RV +A
Sbjct: 129 VLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIA 188
Query: 562 PGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVIVAA 621
P KT+ + + V MG + D++ V F + E+ +A
Sbjct: 189 PSAVKTELLSHTTSQQIKDGYDAWRVDMGGVLAADDVARAVLFAYQQPQNVCIREIALAP 248
Query: 622 GGMQSRL 628
Q +L
Sbjct: 249 TKQQPKL 255
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 83/181 (45%), Gaps = 8/181 (4%)
Query: 13 KVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 72
K+ V+T +S GIG AIA+R S EG +++ +R+ VE L+ V
Sbjct: 17 KLVVITGASSGIGEAIARRFSEEGHPLLLLARR-------VERLKALNLPNTLCAQVDVT 69
Query: 73 KKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 132
K AEK +G D +V+NA + G + N W ++F+VNV Q
Sbjct: 70 DKYTFDTAITRAEKIYGPADAIVNNAGMM-LLGQIDTQEANEWQRMFDVNVLGLLNGMQA 128
Query: 133 VLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCLA 192
VL ++ RN F AY +K A+ +++ V +++A+ N+RV +A
Sbjct: 129 VLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIA 188
Query: 193 P 193
P
Sbjct: 189 P 189
Score = 30.0 bits (66), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 25/39 (64%)
Query: 640 AYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
AY +K A+ +++ V E++A N+RV +AP ++T+
Sbjct: 158 AYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTEL 196
Score = 29.3 bits (64), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 684 AMLSTDKLYGGIDILVSNAAVNPANEPLVECSEV-VWDKIFDVNLKSSFLLTQEVLPYMR 742
A+ +K+YG D +V+NA + + ++ E W ++FDVN+ Q VL M+
Sbjct: 77 AITRAEKIYGPADAIVNNAGMMLLGQ--IDTQEANEWQRMFDVNVLGLLNGMQAVLAPMK 134
Query: 743 KK 744
+
Sbjct: 135 AR 136
>pdb|2YW9|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8
pdb|2YW9|B Chain B, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8
pdb|2YW9|C Chain C, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8
pdb|2YW9|D Chain D, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8
pdb|2YW9|E Chain E, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8
pdb|2YW9|F Chain F, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8
pdb|2YW9|G Chain G, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8
pdb|2YW9|H Chain H, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8
pdb|2WYU|A Chain A, High Resolution Structure Of Thermus Thermophilus Enoyl-
Acyl Carrier Protein Reductase Apo-Form
pdb|2WYU|B Chain B, High Resolution Structure Of Thermus Thermophilus Enoyl-
Acyl Carrier Protein Reductase Apo-Form
pdb|2WYU|C Chain C, High Resolution Structure Of Thermus Thermophilus Enoyl-
Acyl Carrier Protein Reductase Apo-Form
pdb|2WYU|D Chain D, High Resolution Structure Of Thermus Thermophilus Enoyl-
Acyl Carrier Protein Reductase Apo-Form
pdb|2WYV|A Chain A, High Resolution Structure Of Thermus Thermophilus Enoyl-
Acyl Carrier Protein Reductase Nad-Form
pdb|2WYV|B Chain B, High Resolution Structure Of Thermus Thermophilus Enoyl-
Acyl Carrier Protein Reductase Nad-Form
pdb|2WYV|C Chain C, High Resolution Structure Of Thermus Thermophilus Enoyl-
Acyl Carrier Protein Reductase Nad-Form
pdb|2WYV|D Chain D, High Resolution Structure Of Thermus Thermophilus Enoyl-
Acyl Carrier Protein Reductase Nad-Form
pdb|2WYW|A Chain A, High Resolution Structure Of Thermus Thermophilus Enoyl-
Acyl Carrier Protein Reductase Nad And Triclosan-Form
pdb|2WYW|B Chain B, High Resolution Structure Of Thermus Thermophilus Enoyl-
Acyl Carrier Protein Reductase Nad And Triclosan-Form
pdb|2WYW|C Chain C, High Resolution Structure Of Thermus Thermophilus Enoyl-
Acyl Carrier Protein Reductase Nad And Triclosan-Form
pdb|2WYW|D Chain D, High Resolution Structure Of Thermus Thermophilus Enoyl-
Acyl Carrier Protein Reductase Nad And Triclosan-Form
Length = 261
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 11/251 (4%)
Query: 379 LAGKVAVVTASSD--GIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGV 436
L+GK A+V ++ +GFAIA +L GA V +S + E +A + + G +
Sbjct: 6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALL--F 63
Query: 437 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNP---ATGPVVECPENVWDKIFEVNVK 493
V + E+ LF ++ FGG+D LV A P G ++ W EV+
Sbjct: 64 RADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAY 123
Query: 494 STFLLTQEVLPYIRKRNXXXXXXXXXXXXLAP-FKLLGAYSVSKTALLGLTKAVAQDLAS 552
S + + P +R+ + P + ++ +++K AL + +A +L
Sbjct: 124 SLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVM---AIAKAALEASVRYLAYELGP 180
Query: 553 ENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASY 612
+ +RVN ++ G +T A ++ + ++ P+ R +E+G + FL S AS
Sbjct: 181 KGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLASG 240
Query: 613 ITGEVIVAAGG 623
ITGEV+ G
Sbjct: 241 ITGEVVYVDAG 251
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 11/191 (5%)
Query: 10 LTGKVAVVTASSD--GIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGV 67
L+GK A+V ++ +GFAIA +L GA V +S + E +A + + G +
Sbjct: 6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALL--F 63
Query: 68 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNP---ATGPVVECPENVWDKIFEVNVK 124
V + E+ LF ++ FGG+D LV A P G ++ W EV+
Sbjct: 64 RADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAY 123
Query: 125 STFLLTQEVLPYIRKRNXXXXXXXXXXXXLAP-FKLLGAYSVSKTALLGLTKAVAQDLAS 183
S + + P +R+ + P + ++ +++K AL + +A +L
Sbjct: 124 SLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVM---AIAKAALEASVRYLAYELGP 180
Query: 184 ENIRVNCLAPG 194
+ +RVN ++ G
Sbjct: 181 KGVRVNAISAG 191
Score = 30.0 bits (66), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 642 SVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
+++K AL + +A +L P+ +RVN ++ G +RT
Sbjct: 161 AIAKAALEASVRYLAYELGPKGVRVNAISAGPVRT 195
>pdb|1ULU|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8
pdb|1ULU|B Chain B, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8
pdb|1ULU|C Chain C, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8
pdb|1ULU|D Chain D, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8
Length = 261
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 111/252 (44%), Gaps = 9/252 (3%)
Query: 379 LAGKVAVVTASSD--GIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGV 436
L+GK A+V ++ +GFAIA +L GA V +S + E +A + + G +
Sbjct: 6 LSGKKALVXGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALL--F 63
Query: 437 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNP---ATGPVVECPENVWDKIFEVNVK 493
V + E+ LF ++ FGG+D LV A P G ++ W EV+
Sbjct: 64 RADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAXEGRYIDTRRQDWLLALEVSAY 123
Query: 494 STFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASE 553
S + + P +R+ + P + A ++K AL + +A +L +
Sbjct: 124 SLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVXA--IAKAALEASVRYLAYELGPK 181
Query: 554 NIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYI 613
+RVN ++ G +T A ++ + ++ P+ R +E+G + FL S AS I
Sbjct: 182 GVRVNAISAGPVRTVAARSIPGFTKXYDRVAQTAPLRRNITQEEVGNLGLFLLSPLASGI 241
Query: 614 TGEVIVAAGGMQ 625
TGEV+ G
Sbjct: 242 TGEVVYVDAGYH 253
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 9/190 (4%)
Query: 10 LTGKVAVVTASSD--GIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGV 67
L+GK A+V ++ +GFAIA +L GA V +S + E +A + + G +
Sbjct: 6 LSGKKALVXGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALL--F 63
Query: 68 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNP---ATGPVVECPENVWDKIFEVNVK 124
V + E+ LF ++ FGG+D LV A P G ++ W EV+
Sbjct: 64 RADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAXEGRYIDTRRQDWLLALEVSAY 123
Query: 125 STFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASE 184
S + + P +R+ + P + A ++K AL + +A +L +
Sbjct: 124 SLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVXA--IAKAALEASVRYLAYELGPK 181
Query: 185 NIRVNCLAPG 194
+RVN ++ G
Sbjct: 182 GVRVNAISAG 191
Score = 30.0 bits (66), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 642 SVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
+++K AL + +A +L P+ +RVN ++ G +RT
Sbjct: 161 AIAKAALEASVRYLAYELGPKGVRVNAISAGPVRT 195
>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol
pdb|1CYD|B Chain B, Carbonyl Reductase Complexed With Nadph And 2-Propanol
pdb|1CYD|C Chain C, Carbonyl Reductase Complexed With Nadph And 2-Propanol
pdb|1CYD|D Chain D, Carbonyl Reductase Complexed With Nadph And 2-Propanol
Length = 244
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 112/253 (44%), Gaps = 18/253 (7%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
+G A+VT + GIG K L GA VV +R S++ +L KE I V
Sbjct: 5 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDL----VSLAKE-CPGIEPVCV 59
Query: 439 HVAKKEDRQKLFEHAEKKFGGI---DILVSNAAVNPATGPVVECPENVWDKIFEVNVKST 495
+ ++ EK GGI D+LV+NAA+ P +E + +D+ F VN++S
Sbjct: 60 DLGD-------WDATEKALGGIGPVDLLVNNAAL-VIMQPFLEVTKEAFDRSFSVNLRSV 111
Query: 496 FLLTQEVLPYIRKRNX-XXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASEN 554
F ++Q V + R F L YS +K A+ LTKA+A +L
Sbjct: 112 FQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHK 171
Query: 555 IRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSD-DASYI 613
IRVN + P + T + E P+ + A +++ + FL SD AS
Sbjct: 172 IRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTS 231
Query: 614 TGEVIVAAGGMQS 626
G ++V AG + S
Sbjct: 232 GGGILVDAGYLAS 244
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 17/190 (8%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
+G A+VT + GIG K L A GA VV +R S++ +L KE I V
Sbjct: 5 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDL----VSLAKE-CPGIEPVCV 59
Query: 70 HVAKKEDRQKLFEHAEKKFGGI---DILVSNAAVNPATGPVVECPENVWDKIFEVNVKST 126
+ ++ EK GGI D+LV+NAA+ P +E + +D+ F VN++S
Sbjct: 60 DLGD-------WDATEKALGGIGPVDLLVNNAAL-VIMQPFLEVTKEAFDRSFSVNLRSV 111
Query: 127 FLLTQEVLPYIRKRNX-XXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASEN 185
F ++Q V + R F L YS +K A+ LTKA+A +L
Sbjct: 112 FQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHK 171
Query: 186 IRVNCLAPGI 195
IRVN + P +
Sbjct: 172 IRVNSVNPTV 181
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 633 VEFRFIGAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGDRMIA 684
V F + YS +K A+ LTK +A +L P IRVN + P ++ T G ++ A
Sbjct: 141 VTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSA 192
>pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From
Pseudomonas Sp. Lb400
Length = 277
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 116/266 (43%), Gaps = 25/266 (9%)
Query: 378 RLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVV 437
+L G+ ++T + G+G A+ R EGA V + + + + L+ + + G+V
Sbjct: 2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAE----LETDHGDNVLGIV 57
Query: 438 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPEN----VWDKIFEVNVK 493
V ED+++ +FG ID L+ NA + + +V+ PE +D++F +NVK
Sbjct: 58 GDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVK 117
Query: 494 STFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGA---YSVSKTALLGLTKAVAQDL 550
+ LP + A F G Y+ +K A++GL + +A +L
Sbjct: 118 GYIHAVKACLPALVASRGNVIFTISN----AGFYPNGGGPLYTAAKHAIVGLVRELAFEL 173
Query: 551 ASENIRVNCLAPGITKTKF--------AAALYETEEAHEIAVSNVPMGRLA-VPDEMGGI 601
A +RVN + G + + T ++ S +P+GR+ V + G
Sbjct: 174 APY-VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAY 232
Query: 602 VAFLCSDDASYITGEVIVAAGGMQSR 627
V F DA+ TG ++ GG+ R
Sbjct: 233 VFFATRGDAAPATGALLNYDGGLGVR 258
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 89/193 (46%), Gaps = 16/193 (8%)
Query: 9 RLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVV 68
+L G+ ++T + G+G A+ R AEGA V + + + + L+ + + G+V
Sbjct: 2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAE----LETDHGDNVLGIV 57
Query: 69 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPEN----VWDKIFEVNVK 124
V ED+++ +FG ID L+ NA + + +V+ PE +D++F +NVK
Sbjct: 58 GDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVK 117
Query: 125 STFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGA---YSVSKTALLGLTKAVAQDL 181
+ LP + A F G Y+ +K A++GL + +A +L
Sbjct: 118 GYIHAVKACLPALVASRGNVIFTISN----AGFYPNGGGPLYTAAKHAIVGLVRELAFEL 173
Query: 182 ASENIRVNCLAPG 194
A +RVN + G
Sbjct: 174 APY-VRVNGVGSG 185
>pdb|3JQ7|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine
(Dx2)
pdb|3JQ7|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine
(Dx2)
pdb|3JQ7|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine
(Dx2)
pdb|3JQA|D Chain D, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-1,9-Dihydro-6h-Purine-6-Thione (Dx4)
Length = 288
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 115/272 (42%), Gaps = 31/272 (11%)
Query: 377 SRLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGV 436
S + AVVT ++ IG AIA +L G VVI ++ AV + ++ +
Sbjct: 19 SHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVI--HYHNSAEAAVSLADELNKERSNTA 76
Query: 437 VCHVAKKEDRQKLFEHAE-------KKFGGIDILVSNAAVNPATGPVVECP--ENVWDKI 487
V A + L E + FG D+LV+NA+ T P+V+ +N K
Sbjct: 77 VVXQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPT-PLVQGDHEDNSNGKT 135
Query: 488 FEVNVK--------STFLLTQEVLPYIRKRNXXXXXXXXXXXXLA------PFKLLGAYS 533
E V + FLLT + N L P Y+
Sbjct: 136 VETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYN 195
Query: 534 VSKTALLGLTKAVAQDLASENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRL- 592
+ K AL+GLT++ A +LA IRVN +APG++ A EE + VP+GR
Sbjct: 196 MGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMG----EEEKDKWRRKVPLGRRE 251
Query: 593 AVPDEMGGIVAFLCSDDASYITGEVIVAAGGM 624
A +++ V FL S A YITG +I GG+
Sbjct: 252 ASAEQIADAVIFLVSGSAQYITGSIIKVDGGL 283
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 87/211 (41%), Gaps = 26/211 (12%)
Query: 8 SRLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGV 67
S + AVVT ++ IG AIA +L G VVI ++ AV + ++ +
Sbjct: 19 SHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVI--HYHNSAEAAVSLADELNKERSNTA 76
Query: 68 VCHVAKKEDRQKLFEHAE-------KKFGGIDILVSNAAVNPATGPVVECP--ENVWDKI 118
V A + L E + FG D+LV+NA+ T P+V+ +N K
Sbjct: 77 VVXQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPT-PLVQGDHEDNSNGKT 135
Query: 119 FEVNVK--------STFLLTQEVLPYIRKRNXXXXXXXXXXXXLA------PFKLLGAYS 164
E V + FLLT + N L P Y+
Sbjct: 136 VETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYN 195
Query: 165 VSKTALLGLTKAVAQDLASENIRVNCLAPGI 195
+ K AL+GLT++ A +LA IRVN +APG+
Sbjct: 196 MGKHALVGLTQSAALELAPYGIRVNGVAPGV 226
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGL 673
Y++ K AL GLT+ A +LAP IRVN +APG+
Sbjct: 194 YNMGKHALVGLTQSAALELAPYGIRVNGVAPGV 226
>pdb|3JQ7|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine
(Dx2)
pdb|3JQA|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-1,9-Dihydro-6h-Purine-6-Thione (Dx4)
pdb|3JQA|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 2-
Amino-1,9-Dihydro-6h-Purine-6-Thione (Dx4)
pdb|3JQF|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 1,3,5- Triazine-2,4,6-Triamine
(Ax2)
pdb|3JQG|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6-[(4-
Methoxybenzyl)sulfanyl]pyrimidine-2,4-Diamine (Ax6)
pdb|3JQG|C Chain C, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From
Trypanosoma Brucei In Ternary Complex With Cofactor
(Nadp+) And Inhibitor 6-[(4-
Methoxybenzyl)sulfanyl]pyrimidine-2,4-Diamine (Ax6)
pdb|2YHI|A Chain A, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Wh16
pdb|2YHI|C Chain C, Trypanosoma Brucei Ptr1 In Complex With Inhibitor Wh16
Length = 288
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 118/275 (42%), Gaps = 37/275 (13%)
Query: 377 SRLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGV 436
S + AVVT ++ IG AIA +L G VVI N +A +L E +++ S
Sbjct: 19 SHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYH---NSAEAAVSLADELNKERSNT 75
Query: 437 VCHVAKKEDR----------QKLFEHAEKKFGGIDILVSNAAVNPATGPVVECP--ENVW 484
V + D +++ + FG D+LV+NA+ T P+V+ +N
Sbjct: 76 A--VVXQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPT-PLVQGDHEDNSN 132
Query: 485 DKIFEVNVK--------STFLLTQEVLPYIRKRNXXXXXXXXXXXXLA------PFKLLG 530
K E V + FLLT + N L P
Sbjct: 133 GKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFS 192
Query: 531 AYSVSKTALLGLTKAVAQDLASENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMG 590
Y++ K AL+GLT++ A +LA IRVN +APG++ A EE + VP+G
Sbjct: 193 LYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMG----EEEKDKWRRKVPLG 248
Query: 591 RL-AVPDEMGGIVAFLCSDDASYITGEVIVAAGGM 624
R A +++ V FL S A YITG +I GG+
Sbjct: 249 RREASAEQIADAVIFLVSGSAQYITGSIIKVDGGL 283
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 90/214 (42%), Gaps = 32/214 (14%)
Query: 8 SRLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGV 67
S + AVVT ++ IG AIA +L G VVI N +A +L E +++ S
Sbjct: 19 SHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYH---NSAEAAVSLADELNKERSNT 75
Query: 68 VCHVAKKEDR----------QKLFEHAEKKFGGIDILVSNAAVNPATGPVVECP--ENVW 115
V + D +++ + FG D+LV+NA+ T P+V+ +N
Sbjct: 76 A--VVXQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPT-PLVQGDHEDNSN 132
Query: 116 DKIFEVNVK--------STFLLTQEVLPYIRKRNXXXXXXXXXXXXLA------PFKLLG 161
K E V + FLLT + N L P
Sbjct: 133 GKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFS 192
Query: 162 AYSVSKTALLGLTKAVAQDLASENIRVNCLAPGI 195
Y++ K AL+GLT++ A +LA IRVN +APG+
Sbjct: 193 LYNMGKHALVGLTQSAALELAPYGIRVNGVAPGV 226
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGL 673
Y++ K AL GLT+ A +LAP IRVN +APG+
Sbjct: 194 YNMGKHALVGLTQSAALELAPYGIRVNGVAPGV 226
>pdb|3SC4|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase (A0qtm2
Homolog) Mycobacterium Thermoresistibile
pdb|3SC4|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase (A0qtm2
Homolog) Mycobacterium Thermoresistibile
Length = 285
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 92/193 (47%), Gaps = 12/193 (6%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRK-------ESNVNKAVETLQKEGHQ 62
L GK ++ S GIG AIAKR++A+GA+V + ++ + A + +++ G Q
Sbjct: 7 LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQ 66
Query: 63 KISGVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNA-AVNPATGPVVECPENVWDKIFEV 121
+ +V + + ++FGGIDI V+NA A+N G + E P +D + +
Sbjct: 67 ALP-IVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAIN--LGSIEEVPLKRFDLMNGI 123
Query: 122 NVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGA-YSVSKTALLGLTKAVAQD 180
V+ T+ ++Q +P+++ R+ L P L Y ++K + +A++
Sbjct: 124 QVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALGIAEE 183
Query: 181 LASENIRVNCLAP 193
L I N L P
Sbjct: 184 LRDAGIASNTLWP 196
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 12/196 (6%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRK-------ESNVNKAVETLQKEGHQ 431
L GK ++ S GIG AIAKR++ +GA+V + ++ + A + +++ G Q
Sbjct: 7 LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQ 66
Query: 432 KISGVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNA-AVNPATGPVVECPENVWDKIFEV 490
+ +V + + ++FGGIDI V+NA A+N G + E P +D + +
Sbjct: 67 ALP-IVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAIN--LGSIEEVPLKRFDLMNGI 123
Query: 491 NVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGA-YSVSKTALLGLTKAVAQD 549
V+ T+ ++Q +P+++ R+ L P L Y ++K + +A++
Sbjct: 124 QVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALGIAEE 183
Query: 550 LASENIRVNCLAPGIT 565
L I N L P T
Sbjct: 184 LRDAGIASNTLWPRTT 199
Score = 29.6 bits (65), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 692 YGGIDILVSNA-AVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKK 744
+GGIDI V+NA A+N + + E +D + + ++ ++ ++Q +P+M+ +
Sbjct: 91 FGGIDICVNNASAINLGS--IEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGR 142
>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg)
From Bacteroides Thetaiotaomicron
pdb|3NYW|B Chain B, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg)
From Bacteroides Thetaiotaomicron
pdb|3NYW|C Chain C, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg)
From Bacteroides Thetaiotaomicron
pdb|3NYW|D Chain D, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg)
From Bacteroides Thetaiotaomicron
Length = 250
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 91/195 (46%), Gaps = 14/195 (7%)
Query: 383 VAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVV----- 437
+A++T +S GIG IA L+T+G VV+ +R + N+ K + + + +V
Sbjct: 9 LAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIXRSNKHVQEPIVLPLDI 68
Query: 438 --CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKST 495
C A E + +K+G +DILV NAA G + E P + + KI E+NV +
Sbjct: 69 TDCTKADTE-----IKDIHQKYGAVDILV-NAAAXFXDGSLSE-PVDNFRKIXEINVIAQ 121
Query: 496 FLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 555
+ + + V + + F G Y +K ALLGL +++ ++LA I
Sbjct: 122 YGILKTVTEIXKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAPLGI 181
Query: 556 RVNCLAPGITKTKFA 570
RV L PG T A
Sbjct: 182 RVTTLCPGWVNTDXA 196
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 88/188 (46%), Gaps = 14/188 (7%)
Query: 14 VAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVV----- 68
+A++T +S GIG IA L+ +G VV+ +R + N+ K + + + +V
Sbjct: 9 LAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIXRSNKHVQEPIVLPLDI 68
Query: 69 --CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKST 126
C A E + +K+G +DILV NAA G + E P + + KI E+NV +
Sbjct: 69 TDCTKADTE-----IKDIHQKYGAVDILV-NAAAXFXDGSLSE-PVDNFRKIXEINVIAQ 121
Query: 127 FLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 186
+ + + V + + F G Y +K ALLGL +++ ++LA I
Sbjct: 122 YGILKTVTEIXKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAPLGI 181
Query: 187 RVNCLAPG 194
RV L PG
Sbjct: 182 RVTTLCPG 189
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 639 GAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
G Y +K AL GL + + +LAP IRV L PG + T
Sbjct: 156 GIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNT 193
>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2
From Pseudomonas Aeruginosa Pao1 Containing An Atypical
Catalytic Center
pdb|3LF1|B Chain B, Apo Structure Of The Short Chain Oxidoreductase Q9hya2
From Pseudomonas Aeruginosa Pao1 Containing An Atypical
Catalytic Center
pdb|3LF2|A Chain A, Nadph Bound Structure Of The Short Chain Oxidoreductase
Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An
Atypical Catalytic Center
pdb|3LF2|B Chain B, Nadph Bound Structure Of The Short Chain Oxidoreductase
Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An
Atypical Catalytic Center
pdb|3LF2|C Chain C, Nadph Bound Structure Of The Short Chain Oxidoreductase
Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An
Atypical Catalytic Center
pdb|3LF2|D Chain D, Nadph Bound Structure Of The Short Chain Oxidoreductase
Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An
Atypical Catalytic Center
Length = 265
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 107/257 (41%), Gaps = 12/257 (4%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETL-QKEGHQKISGVV 437
L+ VAVVT S GIG A + L GA+V +R + A L Q+ ++ V
Sbjct: 6 LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASV 65
Query: 438 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 497
C V + E E+ G ILV+NA + E + W + ++ S
Sbjct: 66 CDVLDALQVRAFAEACERTLGCASILVNNAGQGRVS-TFAETTDEAWSEELQLKFFSVIH 124
Query: 498 LTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 557
+ LP + R P + A S ++ + L +++A + A + +RV
Sbjct: 125 PVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAPKGVRV 184
Query: 558 NCLAPGITKT---------KFAAALYETEEAHEIAVS-NVPMGRLAVPDEMGGIVAFLCS 607
N + G+ ++ + L + ++A + +P+GRL P E + FL S
Sbjct: 185 NGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAILFLAS 244
Query: 608 DDASYITGEVIVAAGGM 624
++Y TG I +GG+
Sbjct: 245 PLSAYTTGSHIDVSGGL 261
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 76/187 (40%), Gaps = 2/187 (1%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETL-QKEGHQKISGVV 68
L+ VAVVT S GIG A + L GA+V +R + A L Q+ ++ V
Sbjct: 6 LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASV 65
Query: 69 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFL 128
C V + E E+ G ILV+NA + E + W + ++ S
Sbjct: 66 CDVLDALQVRAFAEACERTLGCASILVNNAGQGRVS-TFAETTDEAWSEELQLKFFSVIH 124
Query: 129 LTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRV 188
+ LP + R P + A S ++ + L +++A + A + +RV
Sbjct: 125 PVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAPKGVRV 184
Query: 189 NCLAPGI 195
N + G+
Sbjct: 185 NGILIGL 191
>pdb|1MXH|A Chain A, Crystal Structure Of Substrate Complex Of Putative
Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi
pdb|1MXH|B Chain B, Crystal Structure Of Substrate Complex Of Putative
Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi
pdb|1MXH|C Chain C, Crystal Structure Of Substrate Complex Of Putative
Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi
pdb|1MXH|D Chain D, Crystal Structure Of Substrate Complex Of Putative
Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi
Length = 276
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 116/265 (43%), Gaps = 31/265 (11%)
Query: 384 AVVTASSDGIGFAIAKRLSTEGASVVISSRK-ESNVNKAVETLQKEGHQKISGVVCH--- 439
AV+T + IG +IA RL +G VV+ R E + V L + S V+C
Sbjct: 14 AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAA--RAGSAVLCKGDL 71
Query: 440 ---VAKKEDRQKLFEHAEKKFGGIDILVSNAAV---------NPATGPVVECPENVW-DK 486
+ + + + + + + FG D+LV+NA+ + G P + +
Sbjct: 72 SLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAE 131
Query: 487 IFEVNVKSTFLLTQEVLPYI------RKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALL 540
+F N + L + R RN L P Y+++K AL
Sbjct: 132 LFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDL-PLPGFCVYTMAKHALG 190
Query: 541 GLTKAVAQDLASENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRL-AVPDEMG 599
GLT+A A +LA +IRVN +APG++ A ET+E + VP+G+ A ++
Sbjct: 191 GLTRAAALELAPRHIRVNAVAPGLSLLP-PAMPQETQEEYR---RKVPLGQSEASAAQIA 246
Query: 600 GIVAFLCSDDASYITGEVIVAAGGM 624
+AFL S DA YITG + GG+
Sbjct: 247 DAIAFLVSKDAGYITGTTLKVDGGL 271
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 86/204 (42%), Gaps = 26/204 (12%)
Query: 15 AVVTASSDGIGFAIAKRLSAEGASVVISSRK-ESNVNKAVETLQKEGHQKISGVVCH--- 70
AV+T + IG +IA RL +G VV+ R E + V L + S V+C
Sbjct: 14 AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAA--RAGSAVLCKGDL 71
Query: 71 ---VAKKEDRQKLFEHAEKKFGGIDILVSNAAV---------NPATGPVVECPENVW-DK 117
+ + + + + + + FG D+LV+NA+ + G P + +
Sbjct: 72 SLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAE 131
Query: 118 IFEVNVKSTFLLTQEVLPYI------RKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALL 171
+F N + L + R RN L P Y+++K AL
Sbjct: 132 LFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDL-PLPGFCVYTMAKHALG 190
Query: 172 GLTKAVAQDLASENIRVNCLAPGI 195
GLT+A A +LA +IRVN +APG+
Sbjct: 191 GLTRAAALELAPRHIRVNAVAPGL 214
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGL 673
Y+++K AL GLT+ A +LAP +IRVN +APGL
Sbjct: 182 YTMAKHALGGLTRAAALELAPRHIRVNAVAPGL 214
>pdb|2WD7|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066750
pdb|2WD7|C Chain C, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066750
pdb|2WD7|D Chain D, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In
Complex With Nadp And Ddd00066750
Length = 268
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 116/268 (43%), Gaps = 37/268 (13%)
Query: 384 AVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAKK 443
AVVT ++ IG AIA +L G VVI N +A +L E +++ S V +
Sbjct: 6 AVVTGAAKRIGRAIAVKLHQTGYRVVIHYH---NSAEAAVSLADELNKERSNTA--VVXQ 60
Query: 444 EDR----------QKLFEHAEKKFGGIDILVSNAAVNPATGPVVECP--ENVWDKIFEVN 491
D +++ + FG D+LV+NA+ T P+V+ +N K E
Sbjct: 61 ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPT-PLVQGDHEDNSNGKTVETQ 119
Query: 492 VK--------STFLLTQEVLPYIRKRNXXXXXXXXXXXXLA------PFKLLGAYSVSKT 537
V + FLLT + N L P Y++ K
Sbjct: 120 VAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKH 179
Query: 538 ALLGLTKAVAQDLASENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRL-AVPD 596
AL+GLT++ A +LA IRVN +APG++ A EE + VP+GR A +
Sbjct: 180 ALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMG----EEEKDKWRRKVPLGRREASAE 235
Query: 597 EMGGIVAFLCSDDASYITGEVIVAAGGM 624
++ V FL S A YITG +I GG+
Sbjct: 236 QIADAVIFLVSGSAQYITGSIIKVDGGL 263
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 88/207 (42%), Gaps = 32/207 (15%)
Query: 15 AVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAKK 74
AVVT ++ IG AIA +L G VVI N +A +L E +++ S V +
Sbjct: 6 AVVTGAAKRIGRAIAVKLHQTGYRVVIHYH---NSAEAAVSLADELNKERSNTA--VVXQ 60
Query: 75 EDR----------QKLFEHAEKKFGGIDILVSNAAVNPATGPVVECP--ENVWDKIFEVN 122
D +++ + FG D+LV+NA+ T P+V+ +N K E
Sbjct: 61 ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPT-PLVQGDHEDNSNGKTVETQ 119
Query: 123 VK--------STFLLTQEVLPYIRKRNXXXXXXXXXXXXLA------PFKLLGAYSVSKT 168
V + FLLT + N L P Y++ K
Sbjct: 120 VAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKH 179
Query: 169 ALLGLTKAVAQDLASENIRVNCLAPGI 195
AL+GLT++ A +LA IRVN +APG+
Sbjct: 180 ALVGLTQSAALELAPYGIRVNGVAPGV 206
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGL 673
Y++ K AL GLT+ A +LAP IRVN +APG+
Sbjct: 174 YNMGKHALVGLTQSAALELAPYGIRVNGVAPGV 206
>pdb|2C7V|A Chain A, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1)
In Ternary Complex With Cofactor And The Antifolate
Methotrexate
pdb|2C7V|B Chain B, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1)
In Ternary Complex With Cofactor And The Antifolate
Methotrexate
pdb|2C7V|C Chain C, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1)
In Ternary Complex With Cofactor And The Antifolate
Methotrexate
pdb|2C7V|D Chain D, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1)
In Ternary Complex With Cofactor And The Antifolate
Methotrexate
Length = 268
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 116/268 (43%), Gaps = 37/268 (13%)
Query: 384 AVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAKK 443
AVVT ++ IG AIA +L G VVI N +A +L E +++ S V +
Sbjct: 6 AVVTGAAKRIGRAIAVKLHQTGYRVVIHYH---NSAEAAVSLADELNKERSNTA--VVXQ 60
Query: 444 EDR----------QKLFEHAEKKFGGIDILVSNAAVNPATGPVVECP--ENVWDKIFEVN 491
D +++ + FG D+LV+NA+ T P+V+ +N K E
Sbjct: 61 ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPT-PLVQGDHEDNSNGKTVETQ 119
Query: 492 VK--------STFLLTQEVLPYIRKRNXXXXXXXXXXXXLA------PFKLLGAYSVSKT 537
V + FLLT + N L P Y++ K
Sbjct: 120 VAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKH 179
Query: 538 ALLGLTKAVAQDLASENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRL-AVPD 596
AL+GLT++ A +LA IRVN +APG++ A EE + VP+GR A +
Sbjct: 180 ALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMG----EEEKDKWRRKVPLGRREASAE 235
Query: 597 EMGGIVAFLCSDDASYITGEVIVAAGGM 624
++ V FL S A YITG +I GG+
Sbjct: 236 QIADAVIFLVSGSAQYITGSIIKVDGGL 263
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 88/207 (42%), Gaps = 32/207 (15%)
Query: 15 AVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAKK 74
AVVT ++ IG AIA +L G VVI N +A +L E +++ S V +
Sbjct: 6 AVVTGAAKRIGRAIAVKLHQTGYRVVIHYH---NSAEAAVSLADELNKERSNTA--VVXQ 60
Query: 75 EDR----------QKLFEHAEKKFGGIDILVSNAAVNPATGPVVECP--ENVWDKIFEVN 122
D +++ + FG D+LV+NA+ T P+V+ +N K E
Sbjct: 61 ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPT-PLVQGDHEDNSNGKTVETQ 119
Query: 123 VK--------STFLLTQEVLPYIRKRNXXXXXXXXXXXXLA------PFKLLGAYSVSKT 168
V + FLLT + N L P Y++ K
Sbjct: 120 VAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKH 179
Query: 169 ALLGLTKAVAQDLASENIRVNCLAPGI 195
AL+GLT++ A +LA IRVN +APG+
Sbjct: 180 ALVGLTQSAALELAPYGIRVNGVAPGV 206
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGL 673
Y++ K AL GLT+ A +LAP IRVN +APG+
Sbjct: 174 YNMGKHALVGLTQSAALELAPYGIRVNGVAPGV 206
>pdb|1PWX|A Chain A, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With Bromide
pdb|1PWX|B Chain B, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With Bromide
pdb|1PWX|C Chain C, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With Bromide
pdb|1PWX|D Chain D, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With Bromide
pdb|1PWZ|A Chain A, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With (R)-Styrene Oxide And Chloride
pdb|1PWZ|B Chain B, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With (R)-Styrene Oxide And Chloride
pdb|1PX0|A Chain A, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With The Haloalcohol Mimic (R)-1-Para-Nitro-
Phenyl-2-Azido-Ethanol
pdb|1PX0|B Chain B, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With The Haloalcohol Mimic (R)-1-Para-Nitro-
Phenyl-2-Azido-Ethanol
pdb|1PX0|C Chain C, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With The Haloalcohol Mimic (R)-1-Para-Nitro-
Phenyl-2-Azido-Ethanol
pdb|1PX0|D Chain D, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With The Haloalcohol Mimic (R)-1-Para-Nitro-
Phenyl-2-Azido-Ethanol
pdb|1ZMT|A Chain A, Structure Of Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With
(R)-Para-Nitro Styrene Oxide, With A Water Molecule In
The Halide-Binding Site
pdb|1ZMT|B Chain B, Structure Of Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With
(R)-Para-Nitro Styrene Oxide, With A Water Molecule In
The Halide-Binding Site
pdb|1ZMT|C Chain C, Structure Of Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With
(R)-Para-Nitro Styrene Oxide, With A Water Molecule In
The Halide-Binding Site
pdb|1ZMT|D Chain D, Structure Of Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With
(R)-Para-Nitro Styrene Oxide, With A Water Molecule In
The Halide-Binding Site
pdb|1ZO8|A Chain A, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|B Chain B, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|C Chain C, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|D Chain D, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|E Chain E, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|F Chain F, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|G Chain G, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|H Chain H, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|I Chain I, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|J Chain J, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|K Chain K, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|L Chain L, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|M Chain M, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|N Chain N, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|O Chain O, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|P Chain P, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
Length = 254
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 98/250 (39%), Gaps = 19/250 (7%)
Query: 384 AVVTASSDGIGFAIAKRLSTEGASVVI---SSRKESNVNKAVETLQKEGHQKISGVVCHV 440
A+VT G A RLS G +V S +++ + ET +
Sbjct: 4 AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQ----------LKP 53
Query: 441 AKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQ 500
+++ +L E +G +D+LVSN P P+ + + E F L
Sbjct: 54 MSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVN 113
Query: 501 EVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCL 560
V ++KR P+K L Y+ ++ L A++++L NI V +
Sbjct: 114 AVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAI 173
Query: 561 APGITKTKFAAALYETEE-----AHEIAVSNV-PMGRLAVPDEMGGIVAFLCSDDASYIT 614
P ++ + Y TE H V V + RL E+G +VAFL S Y+T
Sbjct: 174 GPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLT 233
Query: 615 GEVIVAAGGM 624
G+V AGG
Sbjct: 234 GQVFWLAGGF 243
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 68/182 (37%), Gaps = 13/182 (7%)
Query: 15 AVVTASSDGIGFAIAKRLSAEGASVVI---SSRKESNVNKAVETLQKEGHQKISGVVCHV 71
A+VT G A RLS G +V S +++ + ET +
Sbjct: 4 AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQ----------LKP 53
Query: 72 AKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQ 131
+++ +L E +G +D+LVSN P P+ + + E F L
Sbjct: 54 MSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVN 113
Query: 132 EVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCL 191
V ++KR P+K L Y+ ++ L A++++L NI V +
Sbjct: 114 AVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAI 173
Query: 192 AP 193
P
Sbjct: 174 GP 175
>pdb|1MXF|A Chain A, Crystal Structure Of Inhibitor Complex Of Putative
Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi
pdb|1MXF|B Chain B, Crystal Structure Of Inhibitor Complex Of Putative
Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi
pdb|1MXF|C Chain C, Crystal Structure Of Inhibitor Complex Of Putative
Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi
pdb|1MXF|D Chain D, Crystal Structure Of Inhibitor Complex Of Putative
Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi
Length = 276
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 116/265 (43%), Gaps = 31/265 (11%)
Query: 384 AVVTASSDGIGFAIAKRLSTEGASVVISSRK-ESNVNKAVETLQKEGHQKISGVVCH--- 439
AV+T + IG +IA RL +G VV+ R E + V L + S V+C
Sbjct: 14 AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAA--RAGSAVLCKGDL 71
Query: 440 ---VAKKEDRQKLFEHAEKKFGGIDILVSNAAV---------NPATGPVVECPENVW-DK 486
+ + + + + + + FG D+LV+NA+ + G P + +
Sbjct: 72 SLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAE 131
Query: 487 IFEVNVKSTFLLTQEVLPYI------RKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALL 540
+F N + L + R RN L P Y+ +K AL
Sbjct: 132 LFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAXTDL-PLPGFCVYTXAKHALG 190
Query: 541 GLTKAVAQDLASENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRL-AVPDEMG 599
GLT+A A +LA +IRVN +APG++ A ET+E + VP+G+ A ++
Sbjct: 191 GLTRAAALELAPRHIRVNAVAPGLSLLP-PAXPQETQEEYR---RKVPLGQSEASAAQIA 246
Query: 600 GIVAFLCSDDASYITGEVIVAAGGM 624
+AFL S DA YITG + GG+
Sbjct: 247 DAIAFLVSKDAGYITGTTLKVDGGL 271
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 86/204 (42%), Gaps = 26/204 (12%)
Query: 15 AVVTASSDGIGFAIAKRLSAEGASVVISSRK-ESNVNKAVETLQKEGHQKISGVVCH--- 70
AV+T + IG +IA RL +G VV+ R E + V L + S V+C
Sbjct: 14 AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAA--RAGSAVLCKGDL 71
Query: 71 ---VAKKEDRQKLFEHAEKKFGGIDILVSNAAV---------NPATGPVVECPENVW-DK 117
+ + + + + + + FG D+LV+NA+ + G P + +
Sbjct: 72 SLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAE 131
Query: 118 IFEVNVKSTFLLTQEVLPYI------RKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALL 171
+F N + L + R RN L P Y+ +K AL
Sbjct: 132 LFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAXTDL-PLPGFCVYTXAKHALG 190
Query: 172 GLTKAVAQDLASENIRVNCLAPGI 195
GLT+A A +LA +IRVN +APG+
Sbjct: 191 GLTRAAALELAPRHIRVNAVAPGL 214
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGL 673
Y+ +K AL GLT+ A +LAP +IRVN +APGL
Sbjct: 182 YTXAKHALGGLTRAAALELAPRHIRVNAVAPGL 214
>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nad
pdb|3T7C|B Chain B, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nad
pdb|3T7C|C Chain C, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nad
pdb|3T7C|D Chain D, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nad
Length = 299
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 114/274 (41%), Gaps = 27/274 (9%)
Query: 376 ASRLAGKVAVVTASSDGIGFAIAKRLSTEGASVV------------ISSRKESNVNKAVE 423
A ++ GKVA +T ++ G G + A L+ EGA ++ + ++ + V
Sbjct: 23 AGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVR 82
Query: 424 TLQKEGHQKISGVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENV 483
++ G + I+ V V + Q + + G +DI+++NAA+ +
Sbjct: 83 QVEALGRRIIASQV-DVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKT 141
Query: 484 WDKIFEVNVKSTFLLTQEVLPYIRK-RNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGL 542
W + +VN+ ++ + +P+I + L + +G Y SK L GL
Sbjct: 142 WRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGL 201
Query: 543 TKAVAQDLASENIRVNCLAPGITKT---------KFAAALYETEEAHEIAVSNVPMGRLA 593
+ +A +L NIRVN + P T + E + V++ M L
Sbjct: 202 MRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLP 261
Query: 594 V----PDEMGGIVAFLCSDDASYITGEVIVAAGG 623
+ P ++ + FL SDDA YITG + GG
Sbjct: 262 IPYVEPADISNAILFLVSDDARYITGVSLPVDGG 295
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 87/200 (43%), Gaps = 14/200 (7%)
Query: 7 ASRLTGKVAVVTASSDGIGFAIAKRLSAEGASVV------------ISSRKESNVNKAVE 54
A ++ GKVA +T ++ G G + A L+ EGA ++ + ++ + V
Sbjct: 23 AGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVR 82
Query: 55 TLQKEGHQKISGVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENV 114
++ G + I+ V V + Q + + G +DI+++NAA+ +
Sbjct: 83 QVEALGRRIIASQV-DVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKT 141
Query: 115 WDKIFEVNVKSTFLLTQEVLPYIRK-RNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGL 173
W + +VN+ ++ + +P+I + L + +G Y SK L GL
Sbjct: 142 WRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGL 201
Query: 174 TKAVAQDLASENIRVNCLAP 193
+ +A +L NIRVN + P
Sbjct: 202 MRTMALELGPRNIRVNIVCP 221
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 23/41 (56%)
Query: 638 IGAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
IG Y SK L GL + +A +L P NIRVN + P + T
Sbjct: 188 IGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPM 228
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 693 GGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKKK 745
G +DI+++NAA+ L W + DVNL +++ + +P++ K
Sbjct: 116 GRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGK 168
>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme
From Clostridium Thermocellum
pdb|3GED|B Chain B, Fingerprint And Structural Analysis Of A Apo Scor Enzyme
From Clostridium Thermocellum
pdb|3GEG|A Chain A, Fingerprint And Structural Analysis Of A Scor Enzyme With
Its Bound Cofactor From Clostridium Thermocellum
pdb|3GEG|B Chain B, Fingerprint And Structural Analysis Of A Scor Enzyme With
Its Bound Cofactor From Clostridium Thermocellum
Length = 247
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 11/182 (6%)
Query: 447 QKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQEVLPYI 506
+K E+A +K ID+LV+NA + G + +D I V +K+ + L++ +
Sbjct: 63 KKFVEYAMEKLQRIDVLVNNAC-RGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDEL 121
Query: 507 RKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCLAPGITK 566
K N AY+ +K ++ LT A+A L + + VNC+APG
Sbjct: 122 IK-NKGRIINIASTRAFQSEPDSEAYASAKGGIVALTHALAMSLGPD-VLVNCIAPGWIN 179
Query: 567 TKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVIVAAGGMQS 626
E +E + + +P G++ P ++ +V FLC D +ITGE I+ GGM
Sbjct: 180 VT------EQQEFTQEDCAAIPAGKVGTPKDISNMVLFLCQQD--FITGETIIVDGGMSK 231
Query: 627 RL 628
R+
Sbjct: 232 RM 233
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 3/117 (2%)
Query: 78 QKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQEVLPYI 137
+K E+A +K ID+LV+NA + G + +D I V +K+ + L++ +
Sbjct: 63 KKFVEYAMEKLQRIDVLVNNAC-RGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDEL 121
Query: 138 RKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCLAPG 194
K N AY+ +K ++ LT A+A L + + VNC+APG
Sbjct: 122 IK-NKGRIINIASTRAFQSEPDSEAYASAKGGIVALTHALAMSLGPD-VLVNCIAPG 176
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 640 AYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLI 674
AY+ +K + LT +A L P+ + VNC+APG I
Sbjct: 145 AYASAKGGIVALTHALAMSLGPD-VLVNCIAPGWI 178
>pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And 3-Keto Butyrate
Length = 261
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 117/266 (43%), Gaps = 32/266 (12%)
Query: 370 MSTAVNASRLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEG 429
M+ AV + + G VAV+T + G+G + AKRL +GA+ V+ S + E
Sbjct: 1 MAAAVRSVK--GLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNS---------EGET 49
Query: 430 HQKISGVVC-----HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENV- 483
K G C +V +++ Q A++KFG ID+ V+ A + A E V
Sbjct: 50 EAKKLGGNCIFAPANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVH 109
Query: 484 ----WDKIFEVNVKSTF---LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFK-LLG--AYS 533
+ ++ VN+ TF L V+ +A F+ +G AYS
Sbjct: 110 TLEDFQRVINVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYS 169
Query: 534 VSKTALLGLTKAVAQDLASENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPM-GRL 592
SK ++G+T +A+DLA IRV +APG+ T L +T S VP RL
Sbjct: 170 ASKGGIVGMTLPIARDLAPIGIRVVTIAPGLFATPLLTTLPDT--VRNFLASQVPFPSRL 227
Query: 593 AVPDEMGGIVAFLCSDDASYITGEVI 618
P E +V + + ++ GEVI
Sbjct: 228 GDPAEYAHLVQMVIEN--PFLNGEVI 251
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 27/211 (12%)
Query: 1 MSTAVNASRLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEG 60
M+ AV + + G VAV+T + G+G + AKRL +GA+ V+ S + E
Sbjct: 1 MAAAVRSVK--GLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNS---------EGET 49
Query: 61 HQKISGVVC-----HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENV- 114
K G C +V +++ Q A++KFG ID+ V+ A + A E V
Sbjct: 50 EAKKLGGNCIFAPANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVH 109
Query: 115 ----WDKIFEVNVKSTF---LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFK-LLG--AYS 164
+ ++ VN+ TF L V+ +A F+ +G AYS
Sbjct: 110 TLEDFQRVINVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYS 169
Query: 165 VSKTALLGLTKAVAQDLASENIRVNCLAPGI 195
SK ++G+T +A+DLA IRV +APG+
Sbjct: 170 ASKGGIVGMTLPIARDLAPIGIRVVTIAPGL 200
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 24/39 (61%)
Query: 640 AYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
AYS SK + G+T +A DLAP IRV +APGL T
Sbjct: 167 AYSASKGGIVGMTLPIARDLAPIGIRVVTIAPGLFATPL 205
>pdb|3GRK|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Reductase
Sdr Glucose-Ribitol Dehydrogenase From Brucella
Melitensis
pdb|3GRK|B Chain B, Crystal Structure Of Short Chain Dehydrogenase Reductase
Sdr Glucose-Ribitol Dehydrogenase From Brucella
Melitensis
pdb|3GRK|C Chain C, Crystal Structure Of Short Chain Dehydrogenase Reductase
Sdr Glucose-Ribitol Dehydrogenase From Brucella
Melitensis
pdb|3GRK|D Chain D, Crystal Structure Of Short Chain Dehydrogenase Reductase
Sdr Glucose-Ribitol Dehydrogenase From Brucella
Melitensis
pdb|3GRK|E Chain E, Crystal Structure Of Short Chain Dehydrogenase Reductase
Sdr Glucose-Ribitol Dehydrogenase From Brucella
Melitensis
pdb|3GRK|F Chain F, Crystal Structure Of Short Chain Dehydrogenase Reductase
Sdr Glucose-Ribitol Dehydrogenase From Brucella
Melitensis
pdb|3GRK|G Chain G, Crystal Structure Of Short Chain Dehydrogenase Reductase
Sdr Glucose-Ribitol Dehydrogenase From Brucella
Melitensis
pdb|3GRK|H Chain H, Crystal Structure Of Short Chain Dehydrogenase Reductase
Sdr Glucose-Ribitol Dehydrogenase From Brucella
Melitensis
Length = 293
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 116/266 (43%), Gaps = 21/266 (7%)
Query: 371 STAVNASRLAGKVAVV--TASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKE 428
S + L GK ++ A++ I + IAK GA + + + ++ + K VE L +E
Sbjct: 21 SMTAQSGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDA-LKKRVEPLAEE 79
Query: 429 GHQKISGVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAV---NPATGPVVECPENVWD 485
++G C VA +FE EKK+G +D LV + TG ++ E
Sbjct: 80 LGAFVAGH-CDVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSE---- 134
Query: 486 KIFEVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPF---KLLGAYSV---SKTAL 539
N +T L++ L + +R L + K++ Y+V +K AL
Sbjct: 135 ----ANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMPNYNVMGVAKAAL 190
Query: 540 LGLTKAVAQDLASENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMG 599
K +A DL +NIRVN ++ G KT A+ + + + N P+ R DE+G
Sbjct: 191 EASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIDEVG 250
Query: 600 GIVAFLCSDDASYITGEVIVAAGGMQ 625
+ + SD + +TGEV A G
Sbjct: 251 DVGLYFLSDLSRSVTGEVHHADSGYH 276
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 21/204 (10%)
Query: 2 STAVNASRLTGKVAVV--TASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKE 59
S + L GK ++ A++ I + IAK GA + + + ++ + K VE L +E
Sbjct: 21 SMTAQSGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDA-LKKRVEPLAEE 79
Query: 60 GHQKISGVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAV---NPATGPVVECPENVWD 116
++G C VA +FE EKK+G +D LV + TG ++ E
Sbjct: 80 LGAFVAGH-CDVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSE---- 134
Query: 117 KIFEVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPF---KLLGAYSV---SKTAL 170
N +T L++ L + +R L + K++ Y+V +K AL
Sbjct: 135 ----ANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMPNYNVMGVAKAAL 190
Query: 171 LGLTKAVAQDLASENIRVNCLAPG 194
K +A DL +NIRVN ++ G
Sbjct: 191 EASVKYLAVDLGPQNIRVNAISAG 214
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 643 VSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
V+K AL K +A DL P+NIRVN ++ G I+T
Sbjct: 185 VAKAALEASVKYLAVDLGPQNIRVNAISAGPIKT 218
>pdb|4DRY|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Rhizobium Meliloti
pdb|4DRY|B Chain B, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Rhizobium Meliloti
pdb|4DRY|C Chain C, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Rhizobium Meliloti
pdb|4DRY|D Chain D, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Rhizobium Meliloti
Length = 281
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 79/177 (44%), Gaps = 2/177 (1%)
Query: 12 GKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHV 71
G++A+VT G+G IA+ LSAEG SVVI+ R+ ++ A + + VVC V
Sbjct: 33 GRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDV 92
Query: 72 AKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQ 131
+ LF +F +D+LV+NA N P+ E W+ I N+ FL TQ
Sbjct: 93 GDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQ 152
Query: 132 EVLPYIRKRNXXXXXXXXXXXXLA--PFKLLGAYSVSKTALLGLTKAVAQDLASENI 186
+ + A P Y+ +K A+ GLTK+ A D +I
Sbjct: 153 HAFRXXKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALDGRXHDI 209
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 78/177 (44%), Gaps = 2/177 (1%)
Query: 381 GKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHV 440
G++A+VT G+G IA+ LS EG SVVI+ R+ ++ A + + VVC V
Sbjct: 33 GRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDV 92
Query: 441 AKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQ 500
+ LF +F +D+LV+NA N P+ E W+ I N+ FL TQ
Sbjct: 93 GDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQ 152
Query: 501 EVLPYIRKRNXXXXXXXXXXXXLA--PFKLLGAYSVSKTALLGLTKAVAQDLASENI 555
+ + A P Y+ +K A+ GLTK+ A D +I
Sbjct: 153 HAFRXXKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALDGRXHDI 209
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 680 DRMIAMLSTDKL-YGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVL 738
D++ A+ + + + +D+LV+NA N PL E + W+ I NL +FL TQ
Sbjct: 96 DQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAF 155
>pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR
pdb|1U7T|B Chain B, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR
pdb|1U7T|C Chain C, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR
pdb|1U7T|D Chain D, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR
Length = 261
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 108/257 (42%), Gaps = 34/257 (13%)
Query: 381 GKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC-- 438
G VAV+T + G+G A A+RL +GAS V+ S E K G C
Sbjct: 10 GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSG---------GEAQAKKLGNNCVF 60
Query: 439 ---HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPAT-------GPVVECPENVWDKIF 488
V ++D Q A+ KFG +D+ V+ A + A+ G + + ++
Sbjct: 61 APADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLED--FQRVL 118
Query: 489 EVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLL------GAYSVSKTALLGL 542
+VN+ TF + + V + + A AYS SK ++G+
Sbjct: 119 DVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGM 178
Query: 543 TKAVAQDLASENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPM-GRLAVPDEMGGI 601
T +A+DLA IRV +APG+ T +L E+ S VP RL P E +
Sbjct: 179 TLPIARDLAPIGIRVMTIAPGLFGTPLLTSL--PEKVRNFLASQVPFPSRLGDPAEYAHL 236
Query: 602 VAFLCSDDASYITGEVI 618
V + + ++ GEVI
Sbjct: 237 VQAIIEN--PFLNGEVI 251
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 86/202 (42%), Gaps = 29/202 (14%)
Query: 12 GKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC-- 69
G VAV+T + G+G A A+RL +GAS V+ S E K G C
Sbjct: 10 GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSG---------GEAQAKKLGNNCVF 60
Query: 70 ---HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPAT-------GPVVECPENVWDKIF 119
V ++D Q A+ KFG +D+ V+ A + A+ G + + ++
Sbjct: 61 APADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLED--FQRVL 118
Query: 120 EVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLL------GAYSVSKTALLGL 173
+VN+ TF + + V + + A AYS SK ++G+
Sbjct: 119 DVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGM 178
Query: 174 TKAVAQDLASENIRVNCLAPGI 195
T +A+DLA IRV +APG+
Sbjct: 179 TLPIARDLAPIGIRVMTIAPGL 200
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 24/39 (61%)
Query: 640 AYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
AYS SK + G+T +A DLAP IRV +APGL T
Sbjct: 167 AYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPL 205
>pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh
pdb|1E3S|B Chain B, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh
pdb|1E3S|C Chain C, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh
pdb|1E3S|D Chain D, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh
pdb|1E3W|B Chain B, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And 3-Keto Butyrate
pdb|1E3W|C Chain C, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And 3-Keto Butyrate
pdb|1E3W|D Chain D, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And 3-Keto Butyrate
Length = 261
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 119/268 (44%), Gaps = 36/268 (13%)
Query: 370 MSTAVNASRLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEG 429
M+ AV + + G VAV+T + G+G + AKRL +GA+ V+ S + E
Sbjct: 1 MAAAVRSVK--GLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNS---------EGET 49
Query: 430 HQKISGVVC-----HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENV- 483
K G C +V +++ Q A++KFG ID+ V+ A + A E V
Sbjct: 50 EAKKLGGNCIFAPANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVH 109
Query: 484 ----WDKIFEVNVKSTF---LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFK-LLG--AYS 533
+ ++ VN+ TF L V+ +A F+ +G AYS
Sbjct: 110 TLEDFQRVINVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYS 169
Query: 534 VSKTALLGLTKAVAQDLASENIRVNCLAPGITKTKFAAALYET--EEAHEIAVSNVPM-G 590
SK ++G+T +A+DLA IRV +APG+ FA L T ++ S VP
Sbjct: 170 ASKGGIVGMTLPIARDLAPIGIRVVTIAPGL----FATPLLTTLPDKVRNFLASQVPFPS 225
Query: 591 RLAVPDEMGGIVAFLCSDDASYITGEVI 618
RL P E +V + + ++ GEVI
Sbjct: 226 RLGDPAEYAHLVQMVIEN--PFLNGEVI 251
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 27/211 (12%)
Query: 1 MSTAVNASRLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEG 60
M+ AV + + G VAV+T + G+G + AKRL +GA+ V+ S + E
Sbjct: 1 MAAAVRSVK--GLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNS---------EGET 49
Query: 61 HQKISGVVC-----HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENV- 114
K G C +V +++ Q A++KFG ID+ V+ A + A E V
Sbjct: 50 EAKKLGGNCIFAPANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVH 109
Query: 115 ----WDKIFEVNVKSTF---LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFK-LLG--AYS 164
+ ++ VN+ TF L V+ +A F+ +G AYS
Sbjct: 110 TLEDFQRVINVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYS 169
Query: 165 VSKTALLGLTKAVAQDLASENIRVNCLAPGI 195
SK ++G+T +A+DLA IRV +APG+
Sbjct: 170 ASKGGIVGMTLPIARDLAPIGIRVVTIAPGL 200
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 24/39 (61%)
Query: 640 AYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
AYS SK + G+T +A DLAP IRV +APGL T
Sbjct: 167 AYSASKGGIVGMTLPIARDLAPIGIRVVTIAPGLFATPL 205
>pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And Estradiol
pdb|1E6W|B Chain B, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And Estradiol
pdb|1E6W|C Chain C, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And Estradiol
pdb|1E6W|D Chain D, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex
With Nadh And Estradiol
Length = 260
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 113/257 (43%), Gaps = 34/257 (13%)
Query: 381 GKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC-- 438
G VAV+T + G+G + AKRL +GA+ V+ S + E K G C
Sbjct: 9 GLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNS---------EGETEAKKLGGNCIF 59
Query: 439 ---HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENV-----WDKIFEV 490
+V +++ Q A++KFG ID+ V+ A + A E V + ++ V
Sbjct: 60 APANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINV 119
Query: 491 NVKSTF---LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFK-LLG--AYSVSKTALLGLTK 544
N+ TF L V+ +A F+ +G AYS SK ++G+T
Sbjct: 120 NLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTL 179
Query: 545 AVAQDLASENIRVNCLAPGITKTKFAAALYET--EEAHEIAVSNVPM-GRLAVPDEMGGI 601
+A+DLA IRV +APG+ FA L T ++ S VP RL P E +
Sbjct: 180 PIARDLAPIGIRVVTIAPGL----FATPLLTTLPDKVRNFLASQVPFPSRLGDPAEYAHL 235
Query: 602 VAFLCSDDASYITGEVI 618
V + + ++ GEVI
Sbjct: 236 VQMVIEN--PFLNGEVI 250
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 90/200 (45%), Gaps = 25/200 (12%)
Query: 12 GKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC-- 69
G VAV+T + G+G + AKRL +GA+ V+ S + E K G C
Sbjct: 9 GLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNS---------EGETEAKKLGGNCIF 59
Query: 70 ---HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENV-----WDKIFEV 121
+V +++ Q A++KFG ID+ V+ A + A E V + ++ V
Sbjct: 60 APANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINV 119
Query: 122 NVKSTF---LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFK-LLG--AYSVSKTALLGLTK 175
N+ TF L V+ +A F+ +G AYS SK ++G+T
Sbjct: 120 NLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTL 179
Query: 176 AVAQDLASENIRVNCLAPGI 195
+A+DLA IRV +APG+
Sbjct: 180 PIARDLAPIGIRVVTIAPGL 199
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 24/39 (61%)
Query: 640 AYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
AYS SK + G+T +A DLAP IRV +APGL T
Sbjct: 166 AYSASKGGIVGMTLPIARDLAPIGIRVVTIAPGLFATPL 204
>pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2
(17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To
Nad+ At 1.2 A
pdb|2O23|B Chain B, The Structure Of Wild-Type Human Hadh2
(17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To
Nad+ At 1.2 A
Length = 265
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 108/257 (42%), Gaps = 34/257 (13%)
Query: 381 GKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC-- 438
G VAV+T + G+G A A+RL +GAS V+ S E K G C
Sbjct: 12 GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSG---------GEAQAKKLGNNCVF 62
Query: 439 ---HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPAT-------GPVVECPENVWDKIF 488
V ++D Q A+ KFG +D+ V+ A + A+ G + + ++
Sbjct: 63 APADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLED--FQRVL 120
Query: 489 EVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLL------GAYSVSKTALLGL 542
+VN+ TF + + V + + A AYS SK ++G+
Sbjct: 121 DVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGM 180
Query: 543 TKAVAQDLASENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPM-GRLAVPDEMGGI 601
T +A+DLA IRV +APG+ T +L E+ S VP RL P E +
Sbjct: 181 TLPIARDLAPIGIRVMTIAPGLFGTPLLTSL--PEKVCNFLASQVPFPSRLGDPAEYAHL 238
Query: 602 VAFLCSDDASYITGEVI 618
V + + ++ GEVI
Sbjct: 239 VQAIIEN--PFLNGEVI 253
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 86/202 (42%), Gaps = 29/202 (14%)
Query: 12 GKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC-- 69
G VAV+T + G+G A A+RL +GAS V+ S E K G C
Sbjct: 12 GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSG---------GEAQAKKLGNNCVF 62
Query: 70 ---HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPAT-------GPVVECPENVWDKIF 119
V ++D Q A+ KFG +D+ V+ A + A+ G + + ++
Sbjct: 63 APADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLED--FQRVL 120
Query: 120 EVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLL------GAYSVSKTALLGL 173
+VN+ TF + + V + + A AYS SK ++G+
Sbjct: 121 DVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGM 180
Query: 174 TKAVAQDLASENIRVNCLAPGI 195
T +A+DLA IRV +APG+
Sbjct: 181 TLPIARDLAPIGIRVMTIAPGL 202
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 24/39 (61%)
Query: 640 AYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
AYS SK + G+T +A DLAP IRV +APGL T
Sbjct: 169 AYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPL 207
>pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Strain 104
pdb|3UWR|B Chain B, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Strain 104
pdb|3UWR|C Chain C, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Strain 104
pdb|3UWR|D Chain D, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Strain 104
Length = 286
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 113/269 (42%), Gaps = 27/269 (10%)
Query: 373 AVNASRLAGKVAVVTASSDGIGFAIAKRLSTEGASVVI---------SSRKESNVNKAVE 423
AV R+AGKVA ++ ++ G G + A RL+ EGA ++ + S E
Sbjct: 7 AVMTGRVAGKVAFISGAARGQGRSHAVRLAQEGADIIAIDICGPIENLAYPHSTPEDLAE 66
Query: 424 T--LQKEGHQKISGVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPE 481
T L K+ ++I V E + + ++ G +DI+V+NA V + + +
Sbjct: 67 TADLVKDLDRRIVTAQVDVRDFEALKSAVDSGVEQLGRLDIIVANAGVGTDGRKLHKIRD 126
Query: 482 NVWDKIFEVNVKSTFLLTQEVLPYIRK--RNXXXXXXXXXXXXLAPFKLLGAYSVSKTAL 539
NVW + ++N+ + + +P++ R A + G Y +K +
Sbjct: 127 NVWQDMIDINLTGVWHTVKAGVPHVLSGGRGGSIVLTSSVGGRKA-YPNTGHYIAAKHGV 185
Query: 540 LGLTKAVAQDLASENIRVNCLAPGITKT---------KFAAALYETEEAHEIAVSNVPMG 590
+GL +A A +L IRVN + P T + E + A + M
Sbjct: 186 IGLMRAFAVELGPHMIRVNAVLPTQVSTTMVMNDQTFRLFRPDLENPGPDDFAPISQMMH 245
Query: 591 RLAVP----DEMGGIVAFLCSDDASYITG 615
L VP ++ V FL SD++ Y+TG
Sbjct: 246 TLPVPWVDASDISNAVLFLASDESRYVTG 274
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 89/203 (43%), Gaps = 14/203 (6%)
Query: 4 AVNASRLTGKVAVVTASSDGIGFAIAKRLSAEGASVVI---------SSRKESNVNKAVE 54
AV R+ GKVA ++ ++ G G + A RL+ EGA ++ + S E
Sbjct: 7 AVMTGRVAGKVAFISGAARGQGRSHAVRLAQEGADIIAIDICGPIENLAYPHSTPEDLAE 66
Query: 55 T--LQKEGHQKISGVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPE 112
T L K+ ++I V E + + ++ G +DI+V+NA V + + +
Sbjct: 67 TADLVKDLDRRIVTAQVDVRDFEALKSAVDSGVEQLGRLDIIVANAGVGTDGRKLHKIRD 126
Query: 113 NVWDKIFEVNVKSTFLLTQEVLPYIRK--RNXXXXXXXXXXXXLAPFKLLGAYSVSKTAL 170
NVW + ++N+ + + +P++ R A + G Y +K +
Sbjct: 127 NVWQDMIDINLTGVWHTVKAGVPHVLSGGRGGSIVLTSSVGGRKA-YPNTGHYIAAKHGV 185
Query: 171 LGLTKAVAQDLASENIRVNCLAP 193
+GL +A A +L IRVN + P
Sbjct: 186 IGLMRAFAVELGPHMIRVNAVLP 208
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 693 GGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYM 741
G +DI+V+NA V L + + VW + D+NL + + +P++
Sbjct: 103 GRLDIIVANAGVGTDGRKLHKIRDNVWQDMIDINLTGVWHTVKAGVPHV 151
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 639 GAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
G Y +K + GL + A +L P IRVN + P + T
Sbjct: 176 GHYIAAKHGVIGLMRAFAVELGPHMIRVNAVLPTQVSTTM 215
>pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As
3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh),
Endoplasmic Reticulum- Associated Amyloid Beta-peptide
Binding Protein (erab)]
Length = 261
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 108/257 (42%), Gaps = 34/257 (13%)
Query: 381 GKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC-- 438
G VAV+T + G+G A A+RL +GAS V+ S E K G C
Sbjct: 10 GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSG---------GEAQAKKLGNNCVF 60
Query: 439 ---HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPAT-------GPVVECPENVWDKIF 488
V ++D Q A+ KFG +D+ V+ A + A+ G + + ++
Sbjct: 61 APADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLED--FQRVL 118
Query: 489 EVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLL------GAYSVSKTALLGL 542
+VN+ TF + + V + + A AYS SK ++G+
Sbjct: 119 DVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGM 178
Query: 543 TKAVAQDLASENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPM-GRLAVPDEMGGI 601
T +A+DLA IRV +APG+ T +L E+ S VP RL P E +
Sbjct: 179 TLPIARDLAPIGIRVMTIAPGLFGTPLLTSL--PEKVCNFLASQVPFPSRLGDPAEYAHL 236
Query: 602 VAFLCSDDASYITGEVI 618
V + + ++ GEVI
Sbjct: 237 VQAIIEN--PFLNGEVI 251
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 86/202 (42%), Gaps = 29/202 (14%)
Query: 12 GKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC-- 69
G VAV+T + G+G A A+RL +GAS V+ S E K G C
Sbjct: 10 GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSG---------GEAQAKKLGNNCVF 60
Query: 70 ---HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPAT-------GPVVECPENVWDKIF 119
V ++D Q A+ KFG +D+ V+ A + A+ G + + ++
Sbjct: 61 APADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLED--FQRVL 118
Query: 120 EVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLL------GAYSVSKTALLGL 173
+VN+ TF + + V + + A AYS SK ++G+
Sbjct: 119 DVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGM 178
Query: 174 TKAVAQDLASENIRVNCLAPGI 195
T +A+DLA IRV +APG+
Sbjct: 179 TLPIARDLAPIGIRVMTIAPGL 200
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 24/39 (61%)
Query: 640 AYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
AYS SK + G+T +A DLAP IRV +APGL T
Sbjct: 167 AYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPL 205
>pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising
Human And Rodent Isoform Potency For 11b-Hydroxysteroid
Dehydrogenase Type 1 11b-Hsd1 Inhibitors
pdb|4BB6|B Chain B, Free-Wilson And Structural Approaches To Co-Optimising
Human And Rodent Isoform Potency For 11b-Hydroxysteroid
Dehydrogenase Type 1 11b-Hsd1 Inhibitors
Length = 292
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 4/194 (2%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L GK +VT +S GIG +A L+ GA VV+++R + + K V + G +
Sbjct: 32 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 91
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
+ ++ A K GG+D+L+ N N + + +V K EVN S +L
Sbjct: 92 TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHV-RKSMEVNFLSYVVL 150
Query: 499 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASE--NIR 556
T LP +++ N +A + L+ AYS SK AL G ++ ++ + N+
Sbjct: 151 TVAALPMLKQSNGSIVVVSSLAGKVA-YPLVAAYSASKFALDGFFSSIRKEYSVSRVNVS 209
Query: 557 VNCLAPGITKTKFA 570
+ G+ T+ A
Sbjct: 210 ITLCVLGLIDTETA 223
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 2/180 (1%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L GK +VT +S GIG +A L+ GA VV+++R + + K V + G +
Sbjct: 32 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 91
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
+ ++ A K GG+D+L+ N N + + +V K EVN S +L
Sbjct: 92 TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHV-RKSMEVNFLSYVVL 150
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
T LP +++ N +A + L+ AYS SK AL G ++ ++ + + V+
Sbjct: 151 TVAALPMLKQSNGSIVVVSSLAGKVA-YPLVAAYSASKFALDGFFSSIRKEYSVSRVNVS 209
>pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In
Complex With An Orally Bioavailable Acidic Inhibitor
Azd4017.
pdb|4HFR|B Chain B, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In
Complex With An Orally Bioavailable Acidic Inhibitor
Azd4017
Length = 272
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 4/194 (2%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L GK +VT +S GIG +A L+ GA VV+++R + + K V + G +
Sbjct: 12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 71
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
+ ++ A K GG+D+L+ N N + + +V K EVN S +L
Sbjct: 72 TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHV-RKSMEVNFLSYVVL 130
Query: 499 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQD--LASENIR 556
T LP +++ N +A + L+ AYS SK AL G ++ ++ ++ N+
Sbjct: 131 TVAALPMLKQSNGSIVVVSSLAGKVA-YPLVAAYSASKFALDGFFSSIRKEYSVSRVNVS 189
Query: 557 VNCLAPGITKTKFA 570
+ G+ T+ A
Sbjct: 190 ITLCVLGLIDTETA 203
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 2/180 (1%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L GK +VT +S GIG +A L+ GA VV+++R + + K V + G +
Sbjct: 12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 71
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
+ ++ A K GG+D+L+ N N + + +V K EVN S +L
Sbjct: 72 TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHV-RKSMEVNFLSYVVL 130
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
T LP +++ N +A + L+ AYS SK AL G ++ ++ + + V+
Sbjct: 131 TVAALPMLKQSNGSIVVVSSLAGKVA-YPLVAAYSASKFALDGFFSSIRKEYSVSRVNVS 189
>pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising
Human And Rodent Isoform Potency For 11b-Hydroxysteroid
Dehydrogenase Type 1 11b-Hsd1 Inhibitors
pdb|4BB5|B Chain B, Free-Wilson And Structural Approaches To Co-Optimising
Human And Rodent Isoform Potency For 11b-Hydroxysteroid
Dehydrogenase Type 1 11b-Hsd1 Inhibitors
pdb|4BB5|C Chain C, Free-Wilson And Structural Approaches To Co-Optimising
Human And Rodent Isoform Potency For 11b-Hydroxysteroid
Dehydrogenase Type 1 11b-Hsd1 Inhibitors
pdb|4BB5|D Chain D, Free-Wilson And Structural Approaches To Co-Optimising
Human And Rodent Isoform Potency For 11b-Hydroxysteroid
Dehydrogenase Type 1 11b-Hsd1 Inhibitors
Length = 292
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 4/194 (2%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L GK +VT +S GIG +A L+ GA VV+++R + + K V + G +
Sbjct: 32 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 91
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
+ ++ A K GG+D+L+ N N + + +V K EVN S +L
Sbjct: 92 TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHV-RKSMEVNFLSYVVL 150
Query: 499 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASE--NIR 556
T LP +++ N +A + L+ AYS SK AL G ++ ++ + N+
Sbjct: 151 TVAALPMLKQSNGSIVVVSSLAGKVA-YPLVAAYSASKFALDGFFSSIRKEYSVSRVNVS 209
Query: 557 VNCLAPGITKTKFA 570
+ G+ T+ A
Sbjct: 210 ITLCVLGLIDTETA 223
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 2/180 (1%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L GK +VT +S GIG +A L+ GA VV+++R + + K V + G +
Sbjct: 32 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 91
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
+ ++ A K GG+D+L+ N N + + +V K EVN S +L
Sbjct: 92 TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHV-RKSMEVNFLSYVVL 150
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
T LP +++ N +A + L+ AYS SK AL G ++ ++ + + V+
Sbjct: 151 TVAALPMLKQSNGSIVVVSSLAGKVA-YPLVAAYSASKFALDGFFSSIRKEYSVSRVNVS 209
>pdb|3E03|A Chain A, Crystal Structure Of A Putative Dehydrogenase From
Xanthomonas Campestris
pdb|3E03|B Chain B, Crystal Structure Of A Putative Dehydrogenase From
Xanthomonas Campestris
pdb|3E03|C Chain C, Crystal Structure Of A Putative Dehydrogenase From
Xanthomonas Campestris
Length = 274
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 90/193 (46%), Gaps = 11/193 (5%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKE-------SNVNKAVETLQKEGHQ 431
L+GK +T +S GIG AIA R + +GA+V I+++ ++ A + G Q
Sbjct: 4 LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQ 63
Query: 432 KISGVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVN 491
++ + C + +++ + FGGIDILV+NA+ G ++ P +D +VN
Sbjct: 64 GLA-LKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRG-TLDTPXKRFDLXQQVN 121
Query: 492 VKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAP--FKLLGAYSVSKTALLGLTKAVAQD 549
+ +F+ Q LP++ + L P + Y+++K +T +A +
Sbjct: 122 ARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKXGXSLVTLGLAAE 181
Query: 550 LASENIRVNCLAP 562
+ + +N L P
Sbjct: 182 FGPQGVAINALWP 194
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 90/193 (46%), Gaps = 11/193 (5%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKE-------SNVNKAVETLQKEGHQ 62
L+GK +T +S GIG AIA R + +GA+V I+++ ++ A + G Q
Sbjct: 4 LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQ 63
Query: 63 KISGVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVN 122
++ + C + +++ + FGGIDILV+NA+ G ++ P +D +VN
Sbjct: 64 GLA-LKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRG-TLDTPXKRFDLXQQVN 121
Query: 123 VKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAP--FKLLGAYSVSKTALLGLTKAVAQD 180
+ +F+ Q LP++ + L P + Y+++K +T +A +
Sbjct: 122 ARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKXGXSLVTLGLAAE 181
Query: 181 LASENIRVNCLAP 193
+ + +N L P
Sbjct: 182 FGPQGVAINALWP 194
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 684 AMLSTDKLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYM 741
A+ +T +GGIDILV+NA+ L + +D VN + SF+ Q LP++
Sbjct: 80 AVAATVDTFGGIDILVNNASAIWLRGTL-DTPXKRFDLXQQVNARGSFVCAQACLPHL 136
>pdb|3SX2|A Chain A, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|B Chain B, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|C Chain C, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|D Chain D, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|E Chain E, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|F Chain F, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|G Chain G, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
pdb|3SX2|H Chain H, Crystal Structure Of A Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Mycobacterium Paratuberculosis In Complex With Nad
Length = 278
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 116/267 (43%), Gaps = 41/267 (15%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVV-------ISS-----RKESNVNKAVETLQ 426
L GKVA +T ++ G G A A RL+ +GA ++ I+S + V+ ++
Sbjct: 11 LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVE 70
Query: 427 KEGHQKISGVVCHVAKKEDRQKL---FEHAEKKFGGIDILVSNAAVNPATGPVVECPENV 483
G + +V A DR+ L + + G +DI+V+NA + P + ++
Sbjct: 71 DIGSR----IVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAP-----MSAGDDG 121
Query: 484 WDKIFEVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGA-------YSVSK 536
W + +VN+ + + +P + K+ A +G+ Y +K
Sbjct: 122 WHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSS--AGLAGVGSADPGSVGYVAAK 179
Query: 537 TALLGLTKAVAQDLASENIRVNCLAPGITKTKFAAALYETE-EAHEIAVSNVP--MG--- 590
++GL + A LA + IRVN + P +T + E A A ++ P MG
Sbjct: 180 HGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAM 239
Query: 591 --RLAVPDEMGGIVAFLCSDDASYITG 615
+ P+++ VA+L SD A YITG
Sbjct: 240 PVEVLAPEDVANAVAWLVSDQARYITG 266
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 91/206 (44%), Gaps = 33/206 (16%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVV-------ISS-----RKESNVNKAVETLQ 57
LTGKVA +T ++ G G A A RL+A+GA ++ I+S + V+ ++
Sbjct: 11 LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVE 70
Query: 58 KEGHQKISGVVCHVAKKEDRQKL---FEHAEKKFGGIDILVSNAAVNPATGPVVECPENV 114
G + +V A DR+ L + + G +DI+V+NA + P + ++
Sbjct: 71 DIGSR----IVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAP-----MSAGDDG 121
Query: 115 WDKIFEVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGA-------YSVSK 167
W + +VN+ + + +P + K+ A +G+ Y +K
Sbjct: 122 WHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSS--AGLAGVGSADPGSVGYVAAK 179
Query: 168 TALLGLTKAVAQDLASENIRVNCLAP 193
++GL + A LA + IRVN + P
Sbjct: 180 HGVVGLMRVYANLLAGQMIRVNSIHP 205
>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410
From Mycobacterium Paratuberculosis Bound To Nad
pdb|3TSC|B Chain B, Crystal Structure Of Short Chain Dehydrogenase Map_2410
From Mycobacterium Paratuberculosis Bound To Nad
pdb|3TSC|C Chain C, Crystal Structure Of Short Chain Dehydrogenase Map_2410
From Mycobacterium Paratuberculosis Bound To Nad
pdb|3TSC|D Chain D, Crystal Structure Of Short Chain Dehydrogenase Map_2410
From Mycobacterium Paratuberculosis Bound To Nad
Length = 277
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 117/267 (43%), Gaps = 28/267 (10%)
Query: 376 ASRLAGKVAVVTASSDGIGFAIAKRLSTEGASVV---ISSRKESNV-------NKAVETL 425
A +L G+VA +T ++ G G A A R++ EGA ++ I+ + S V + ET+
Sbjct: 6 AGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETV 65
Query: 426 Q--KEGHQKISGVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENV 483
+ + +++I V + +K+ + G +DI+V+NA V PE+
Sbjct: 66 RLVEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDF 125
Query: 484 WDKIFEVNVKSTFLLTQEVLPYI---RKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALL 540
D + ++NV T+ P I + + PF + Y+ SK A+
Sbjct: 126 RD-VMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMI--HYTASKHAVT 182
Query: 541 GLTKAVAQDLASENIRVNCLAPGITKTKFAA---------ALYETEEAHEIAVSNVPMGR 591
GL +A A +L +IRVN + PG T + A+ + + +P
Sbjct: 183 GLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLP-DW 241
Query: 592 LAVPDEMGGIVAFLCSDDASYITGEVI 618
+A P+++ V +L SD++ +T I
Sbjct: 242 VAEPEDIADTVCWLASDESRKVTAAQI 268
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 18/203 (8%)
Query: 7 ASRLTGKVAVVTASSDGIGFAIAKRLSAEGASVV---ISSRKESNV-------NKAVETL 56
A +L G+VA +T ++ G G A A R++AEGA ++ I+ + S V + ET+
Sbjct: 6 AGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETV 65
Query: 57 Q--KEGHQKISGVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENV 114
+ + +++I V + +K+ + G +DI+V+NA V PE+
Sbjct: 66 RLVEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDF 125
Query: 115 WDKIFEVNVKSTFLLTQEVLPYI---RKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALL 171
D + ++NV T+ P I + + PF + Y+ SK A+
Sbjct: 126 RD-VMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMI--HYTASKHAVT 182
Query: 172 GLTKAVAQDLASENIRVNCLAPG 194
GL +A A +L +IRVN + PG
Sbjct: 183 GLARAFAAELGKHSIRVNSVHPG 205
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 637 FIGAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFG 679
F+ Y+ SK A+ GL + A +L +IRVN + PG + T G
Sbjct: 170 FMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMG 212
>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat
Peroxisomal Multifunctional Enzyme Type 2
pdb|1GZ6|B Chain B, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat
Peroxisomal Multifunctional Enzyme Type 2
pdb|1GZ6|C Chain C, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat
Peroxisomal Multifunctional Enzyme Type 2
pdb|1GZ6|D Chain D, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat
Peroxisomal Multifunctional Enzyme Type 2
Length = 319
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 14/194 (7%)
Query: 9 RLTGKVAVVTASSDGIGFAIAKRLSAEGASVVIS---------SRKESNVNKAVETLQKE 59
R G+V +VT + G+G A A + GA VV++ + S +K VE +++
Sbjct: 6 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR 65
Query: 60 GHQKISGVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIF 119
G + V + E +KL + A FG ID++V+NA + + WD I
Sbjct: 66 GGK----AVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGI-LRDRSFSRISDEDWDIIQ 120
Query: 120 EVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQ 179
V+++ +F +T+ + +K+N + YS +K LLGL +
Sbjct: 121 RVHLRGSFQVTRAAWDHXKKQNYGRIIXTASASGIYGNFGQANYSAAKLGLLGLANTLVI 180
Query: 180 DLASENIRVNCLAP 193
+ NI N +AP
Sbjct: 181 EGRKNNIHCNTIAP 194
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 14/194 (7%)
Query: 378 RLAGKVAVVTASSDGIGFAIAKRLSTEGASVVIS---------SRKESNVNKAVETLQKE 428
R G+V +VT + G+G A A + GA VV++ + S +K VE +++
Sbjct: 6 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR 65
Query: 429 GHQKISGVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIF 488
G + V + E +KL + A FG ID++V+NA + + WD I
Sbjct: 66 GGK----AVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGI-LRDRSFSRISDEDWDIIQ 120
Query: 489 EVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQ 548
V+++ +F +T+ + +K+N + YS +K LLGL +
Sbjct: 121 RVHLRGSFQVTRAAWDHXKKQNYGRIIXTASASGIYGNFGQANYSAAKLGLLGLANTLVI 180
Query: 549 DLASENIRVNCLAP 562
+ NI N +AP
Sbjct: 181 EGRKNNIHCNTIAP 194
>pdb|3PPI|A Chain A, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase
Type-2 From Mycobacterium Avium
pdb|3PPI|B Chain B, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase
Type-2 From Mycobacterium Avium
pdb|3PPI|C Chain C, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase
Type-2 From Mycobacterium Avium
pdb|3PPI|D Chain D, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase
Type-2 From Mycobacterium Avium
Length = 281
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
Query: 531 AYSVSKTALLGLTKAVAQDLASENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPM- 589
AY+ +K ++GLT A A+DL+S IRVN +APG KT ++ EEA +N+P
Sbjct: 186 AYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESV--GEEALAKFAANIPFP 243
Query: 590 GRLAVPDEMGGIVAFLCSDDASYITGEVI 618
RL PDE AFL ++ YI GEV+
Sbjct: 244 KRLGTPDEFADAAAFLLTN--GYINGEVM 270
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 25/33 (75%)
Query: 162 AYSVSKTALLGLTKAVAQDLASENIRVNCLAPG 194
AY+ +K ++GLT A A+DL+S IRVN +APG
Sbjct: 186 AYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPG 218
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 640 AYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
AY+ +K + GLT A DL+ IRVN +APG ++T
Sbjct: 186 AYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKT 222
>pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Sulfone Inhibitor
Length = 275
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 4/194 (2%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L GK +VT +S GIG +A L+ GA VV+++R + + K V + G +
Sbjct: 22 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 81
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
+ ++ A K GG+D+L+ N N + + +V K EVN S +L
Sbjct: 82 TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHV-RKSMEVNFLSYVVL 140
Query: 499 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQD--LASENIR 556
T LP +++ N +A + ++ AYS SK AL G ++ ++ ++ N+
Sbjct: 141 TVAALPMLKQSNGSIVVVSSLAGKVA-YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVS 199
Query: 557 VNCLAPGITKTKFA 570
+ G+ T+ A
Sbjct: 200 ITLCVLGLIDTETA 213
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 2/180 (1%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L GK +VT +S GIG +A L+ GA VV+++R + + K V + G +
Sbjct: 22 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 81
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
+ ++ A K GG+D+L+ N N + + +V K EVN S +L
Sbjct: 82 TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHV-RKSMEVNFLSYVVL 140
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
T LP +++ N +A + ++ AYS SK AL G ++ ++ + + V+
Sbjct: 141 TVAALPMLKQSNGSIVVVSSLAGKVA-YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVS 199
>pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1
Inhibitors
pdb|2RBE|B Chain B, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1
Inhibitors
pdb|2RBE|C Chain C, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1
Inhibitors
pdb|2RBE|D Chain D, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1
Inhibitors
pdb|3BYZ|A Chain A, 2-Amino-1,3-Thiazol-4(5h)-Ones As Potent And Selective 11-
Hydroxysteroid Dehydrogenase Type 1 Inhibitors
pdb|3BYZ|B Chain B, 2-Amino-1,3-Thiazol-4(5h)-Ones As Potent And Selective 11-
Hydroxysteroid Dehydrogenase Type 1 Inhibitors
pdb|3BYZ|C Chain C, 2-Amino-1,3-Thiazol-4(5h)-Ones As Potent And Selective 11-
Hydroxysteroid Dehydrogenase Type 1 Inhibitors
pdb|3BYZ|D Chain D, 2-Amino-1,3-Thiazol-4(5h)-Ones As Potent And Selective 11-
Hydroxysteroid Dehydrogenase Type 1 Inhibitors
pdb|3EY4|A Chain A, Further Studies With The 2-Amino-1,3-Thiazol-4(5h)-One
Class Of 11-Hydroxysteroid Dehydrogenase Type 1
(11-Hsd1) Inhibitors: Reducing Pregnane X Receptor (Pxr)
Activity And Exploring Activity In A Monkey
Pharmacodynamic Model
pdb|3EY4|B Chain B, Further Studies With The 2-Amino-1,3-Thiazol-4(5h)-One
Class Of 11-Hydroxysteroid Dehydrogenase Type 1
(11-Hsd1) Inhibitors: Reducing Pregnane X Receptor (Pxr)
Activity And Exploring Activity In A Monkey
Pharmacodynamic Model
pdb|3EY4|C Chain C, Further Studies With The 2-Amino-1,3-Thiazol-4(5h)-One
Class Of 11-Hydroxysteroid Dehydrogenase Type 1
(11-Hsd1) Inhibitors: Reducing Pregnane X Receptor (Pxr)
Activity And Exploring Activity In A Monkey
Pharmacodynamic Model
pdb|3EY4|D Chain D, Further Studies With The 2-Amino-1,3-Thiazol-4(5h)-One
Class Of 11-Hydroxysteroid Dehydrogenase Type 1
(11-Hsd1) Inhibitors: Reducing Pregnane X Receptor (Pxr)
Activity And Exploring Activity In A Monkey
Pharmacodynamic Model
Length = 275
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 4/194 (2%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L GK +VT +S GIG +A L+ GA VV+++R + + K V + G +
Sbjct: 15 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 74
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
+ ++ A K GG+D+L+ N N + + +V K EVN S +L
Sbjct: 75 TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHV-RKSMEVNFLSYVVL 133
Query: 499 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQD--LASENIR 556
T LP +++ N +A + ++ AYS SK AL G ++ ++ ++ N+
Sbjct: 134 TVAALPMLKQSNGSIVVVSSLAGKVA-YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVS 192
Query: 557 VNCLAPGITKTKFA 570
+ G+ T+ A
Sbjct: 193 ITLCVLGLIDTETA 206
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 2/180 (1%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L GK +VT +S GIG +A L+ GA VV+++R + + K V + G +
Sbjct: 15 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 74
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
+ ++ A K GG+D+L+ N N + + +V K EVN S +L
Sbjct: 75 TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHV-RKSMEVNFLSYVVL 133
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
T LP +++ N +A + ++ AYS SK AL G ++ ++ + + V+
Sbjct: 134 TVAALPMLKQSNGSIVVVSSLAGKVA-YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVS 192
>pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In
Complex With Nadp And Carbenoxolone
pdb|2BEL|B Chain B, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In
Complex With Nadp And Carbenoxolone
pdb|2BEL|C Chain C, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In
Complex With Nadp And Carbenoxolone
pdb|2BEL|D Chain D, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In
Complex With Nadp And Carbenoxolone
Length = 283
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 4/194 (2%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L GK +VT +S GIG +A L+ GA VV+++R + + K V + G +
Sbjct: 29 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 88
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
+ ++ A K GG+D+L+ N N + + +V K EVN S +L
Sbjct: 89 TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHV-RKSMEVNFLSYVVL 147
Query: 499 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQD--LASENIR 556
T LP +++ N +A + ++ AYS SK AL G ++ ++ ++ N+
Sbjct: 148 TVAALPMLKQSNGSIVVVSSLAGKVA-YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVS 206
Query: 557 VNCLAPGITKTKFA 570
+ G+ T+ A
Sbjct: 207 ITLCVLGLIDTETA 220
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 2/180 (1%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L GK +VT +S GIG +A L+ GA VV+++R + + K V + G +
Sbjct: 29 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 88
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
+ ++ A K GG+D+L+ N N + + +V K EVN S +L
Sbjct: 89 TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHV-RKSMEVNFLSYVVL 147
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
T LP +++ N +A + ++ AYS SK AL G ++ ++ + + V+
Sbjct: 148 TVAALPMLKQSNGSIVVVSSLAGKVA-YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVS 206
>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
pdb|1ZBQ|B Chain B, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
pdb|1ZBQ|C Chain C, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
pdb|1ZBQ|D Chain D, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
pdb|1ZBQ|E Chain E, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
pdb|1ZBQ|F Chain F, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
Length = 327
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 87/194 (44%), Gaps = 14/194 (7%)
Query: 9 RLTGKVAVVTASSDGIGFAIAKRLSAEGASVVIS---------SRKESNVNKAVETLQKE 59
R G+V +VT + G+G A A + GA VV++ + +K VE +++
Sbjct: 27 RFDGRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVEEIRRR 86
Query: 60 GHQKISGVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIF 119
G + V + E+ +K+ + A FG ID++V+NA + + WD I
Sbjct: 87 GGK----AVANYDSVEEGEKVVKTALDAFGRIDVVVNNAGILRDR-SFARISDEDWDIIH 141
Query: 120 EVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQ 179
V+++ +F +T+ +++K+ + YS +K LLGL ++A
Sbjct: 142 RVHLRGSFQVTRAAWEHMKKQKYGRIIMTSSASGIYGNFGQANYSAAKLGLLGLANSLAI 201
Query: 180 DLASENIRVNCLAP 193
+ NI N +AP
Sbjct: 202 EGRKSNIHCNTIAP 215
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 87/194 (44%), Gaps = 14/194 (7%)
Query: 378 RLAGKVAVVTASSDGIGFAIAKRLSTEGASVVIS---------SRKESNVNKAVETLQKE 428
R G+V +VT + G+G A A + GA VV++ + +K VE +++
Sbjct: 27 RFDGRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVEEIRRR 86
Query: 429 GHQKISGVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIF 488
G + V + E+ +K+ + A FG ID++V+NA + + WD I
Sbjct: 87 GGK----AVANYDSVEEGEKVVKTALDAFGRIDVVVNNAGILRDR-SFARISDEDWDIIH 141
Query: 489 EVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQ 548
V+++ +F +T+ +++K+ + YS +K LLGL ++A
Sbjct: 142 RVHLRGSFQVTRAAWEHMKKQKYGRIIMTSSASGIYGNFGQANYSAAKLGLLGLANSLAI 201
Query: 549 DLASENIRVNCLAP 562
+ NI N +AP
Sbjct: 202 EGRKSNIHCNTIAP 215
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 692 YGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKKK 745
+G ID++V+NA + + S+ WD I V+L+ SF +T+ +M+K+K
Sbjct: 111 FGRIDVVVNNAGI-LRDRSFARISDEDWDIIHRVHLRGSFQVTRAAWEHMKKQK 163
>pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
pdb|2IRW|B Chain B, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
pdb|2IRW|C Chain C, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
pdb|2IRW|D Chain D, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
pdb|2IRW|E Chain E, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
pdb|2IRW|F Chain F, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
pdb|2IRW|G Chain G, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
pdb|2IRW|H Chain H, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With
Nadp And Adamantane Ether Inhibitor
Length = 264
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 4/194 (2%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L GK +VT +S GIG +A L+ GA VV+++R + + K V + G +
Sbjct: 7 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 66
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
+ ++ A K GG+D+L+ N N + + +V K EVN S +L
Sbjct: 67 TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHV-RKSMEVNFLSYVVL 125
Query: 499 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQD--LASENIR 556
T LP +++ N +A + ++ AYS SK AL G ++ ++ ++ N+
Sbjct: 126 TVAALPMLKQSNGSIVVVSSLAGKVA-YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVS 184
Query: 557 VNCLAPGITKTKFA 570
+ G+ T+ A
Sbjct: 185 ITLCVLGLIDTETA 198
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 2/180 (1%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L GK +VT +S GIG +A L+ GA VV+++R + + K V + G +
Sbjct: 7 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 66
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
+ ++ A K GG+D+L+ N N + + +V K EVN S +L
Sbjct: 67 TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHV-RKSMEVNFLSYVVL 125
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
T LP +++ N +A + ++ AYS SK AL G ++ ++ + + V+
Sbjct: 126 TVAALPMLKQSNGSIVVVSSLAGKVA-YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVS 184
>pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of
Tetrameric 11b-hsd1
pdb|1XU7|B Chain B, Crystal Structure Of The Interface Open Conformation Of
Tetrameric 11b-hsd1
pdb|1XU7|C Chain C, Crystal Structure Of The Interface Open Conformation Of
Tetrameric 11b-hsd1
pdb|1XU7|D Chain D, Crystal Structure Of The Interface Open Conformation Of
Tetrameric 11b-hsd1
pdb|1XU9|A Chain A, Crystal Structure Of The Interface Closed Conformation Of
11b-Hydroxysteroid Dehydrogenase Isozyme 1
pdb|1XU9|B Chain B, Crystal Structure Of The Interface Closed Conformation Of
11b-Hydroxysteroid Dehydrogenase Isozyme 1
pdb|1XU9|C Chain C, Crystal Structure Of The Interface Closed Conformation Of
11b-Hydroxysteroid Dehydrogenase Isozyme 1
pdb|1XU9|D Chain D, Crystal Structure Of The Interface Closed Conformation Of
11b-Hydroxysteroid Dehydrogenase Isozyme 1
pdb|3BZU|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase(Hsd1) In Complex With Nadp And Thiazolone
Inhibitor
pdb|3BZU|B Chain B, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase(Hsd1) In Complex With Nadp And Thiazolone
Inhibitor
pdb|3BZU|C Chain C, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase(Hsd1) In Complex With Nadp And Thiazolone
Inhibitor
pdb|3BZU|D Chain D, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase(Hsd1) In Complex With Nadp And Thiazolone
Inhibitor
pdb|3CZR|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With
Arylsulfonylpiperazine Inhibitor
pdb|3CZR|B Chain B, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With
Arylsulfonylpiperazine Inhibitor
pdb|3D3E|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Benzamide Inhibitor
pdb|3D3E|B Chain B, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Benzamide Inhibitor
pdb|3D3E|C Chain C, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Benzamide Inhibitor
pdb|3D3E|D Chain D, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Benzamide Inhibitor
pdb|3D4N|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Sulfonamide
Inhibitor
pdb|3D4N|B Chain B, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Sulfonamide
Inhibitor
pdb|3D4N|C Chain C, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Sulfonamide
Inhibitor
pdb|3D4N|D Chain D, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase (Hsd1) In Complex With Sulfonamide
Inhibitor
pdb|3FRJ|A Chain A, Crystal Structure Of 11b-Hydroxysteroid Dehydrogenase-1
(11b-Hsd1) In Complex With Piperidyl Benzamide Inhibitor
pdb|3FRJ|B Chain B, Crystal Structure Of 11b-Hydroxysteroid Dehydrogenase-1
(11b-Hsd1) In Complex With Piperidyl Benzamide Inhibitor
pdb|3HFG|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An Sulfonyl-Piperazine Inhibitor
pdb|3HFG|B Chain B, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An Sulfonyl-Piperazine Inhibitor
pdb|3HFG|C Chain C, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An Sulfonyl-Piperazine Inhibitor
pdb|3HFG|D Chain D, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An Sulfonyl-Piperazine Inhibitor
pdb|3FCO|A Chain A, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase 1
(11b-Hsd1) In Complex With Benzamide Inhibitor
pdb|3FCO|B Chain B, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase 1
(11b-Hsd1) In Complex With Benzamide Inhibitor
pdb|3H6K|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An
Ortho-Chlro-Sulfonyl-Piperazine Inhibitor
pdb|3H6K|B Chain B, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An
Ortho-Chlro-Sulfonyl-Piperazine Inhibitor
pdb|3H6K|C Chain C, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An
Ortho-Chlro-Sulfonyl-Piperazine Inhibitor
pdb|3H6K|D Chain D, Crystal Structure Of Human 11-Beta-Hydroxysteroid-
Dehydrogenase Bound To An
Ortho-Chlro-Sulfonyl-Piperazine Inhibitor
pdb|3OQ1|A Chain A, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase-1
(11b-Hsd1) In Complex With Diarylsulfone Inhibitor
pdb|3OQ1|B Chain B, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase-1
(11b-Hsd1) In Complex With Diarylsulfone Inhibitor
pdb|3OQ1|C Chain C, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase-1
(11b-Hsd1) In Complex With Diarylsulfone Inhibitor
pdb|3OQ1|D Chain D, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase-1
(11b-Hsd1) In Complex With Diarylsulfone Inhibitor
pdb|3QQP|A Chain A, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase 1
(11b-Hsd1) In Complex With Urea Inhibitor
pdb|3QQP|B Chain B, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase 1
(11b-Hsd1) In Complex With Urea Inhibitor
pdb|3QQP|C Chain C, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase 1
(11b-Hsd1) In Complex With Urea Inhibitor
pdb|3QQP|D Chain D, Crystal Structure Of 11beta-Hydroxysteroid Dehydrogenase 1
(11b-Hsd1) In Complex With Urea Inhibitor
Length = 286
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 4/194 (2%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L GK +VT +S GIG +A L+ GA VV+++R + + K V + G +
Sbjct: 26 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 85
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
+ ++ A K GG+D+L+ N N + + +V K EVN S +L
Sbjct: 86 TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHV-RKSMEVNFLSYVVL 144
Query: 499 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQD--LASENIR 556
T LP +++ N +A + ++ AYS SK AL G ++ ++ ++ N+
Sbjct: 145 TVAALPMLKQSNGSIVVVSSLAGKVA-YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVS 203
Query: 557 VNCLAPGITKTKFA 570
+ G+ T+ A
Sbjct: 204 ITLCVLGLIDTETA 217
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 2/180 (1%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L GK +VT +S GIG +A L+ GA VV+++R + + K V + G +
Sbjct: 26 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 85
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
+ ++ A K GG+D+L+ N N + + +V K EVN S +L
Sbjct: 86 TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHV-RKSMEVNFLSYVVL 144
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
T LP +++ N +A + ++ AYS SK AL G ++ ++ + + V+
Sbjct: 145 TVAALPMLKQSNGSIVVVSSLAGKVA-YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVS 203
>pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole
Inhibitor
pdb|3D5Q|B Chain B, Crystal Structure Of 11b-Hsd1 In Complex With Triazole
Inhibitor
pdb|3D5Q|C Chain C, Crystal Structure Of 11b-Hsd1 In Complex With Triazole
Inhibitor
pdb|3D5Q|D Chain D, Crystal Structure Of 11b-Hsd1 In Complex With Triazole
Inhibitor
Length = 272
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 4/194 (2%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L GK +VT +S GIG +A L+ GA VV+++R + + K V + G +
Sbjct: 12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 71
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
+ ++ A K GG+D+L+ N N + + +V K EVN S +L
Sbjct: 72 TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHV-RKSMEVNFLSYVVL 130
Query: 499 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQD--LASENIR 556
T LP +++ N +A + ++ AYS SK AL G ++ ++ ++ N+
Sbjct: 131 TVAALPMLKQSNGSIVVVSSLAGKVA-YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVS 189
Query: 557 VNCLAPGITKTKFA 570
+ G+ T+ A
Sbjct: 190 ITLCVLGLIDTETA 203
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 2/180 (1%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L GK +VT +S GIG +A L+ GA VV+++R + + K V + G +
Sbjct: 12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 71
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
+ ++ A K GG+D+L+ N N + + +V K EVN S +L
Sbjct: 72 TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHV-RKSMEVNFLSYVVL 130
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
T LP +++ N +A + ++ AYS SK AL G ++ ++ + + V+
Sbjct: 131 TVAALPMLKQSNGSIVVVSSLAGKVA-YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVS 189
>pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase 1 (11b-Hsd1) In Complex With
4,4-Disubstituted Cyclohexylbenzamide Inhibitor
pdb|3PDJ|B Chain B, Crystal Structure Of Human 11-Beta-Hydroxysteroid
Dehydrogenase 1 (11b-Hsd1) In Complex With
4,4-Disubstituted Cyclohexylbenzamide Inhibitor
Length = 273
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 4/194 (2%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L GK +VT +S GIG +A L+ GA VV+++R + + K V + G +
Sbjct: 13 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 72
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
+ ++ A K GG+D+L+ N N + + +V K EVN S +L
Sbjct: 73 TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHV-RKSMEVNFLSYVVL 131
Query: 499 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQD--LASENIR 556
T LP +++ N +A + ++ AYS SK AL G ++ ++ ++ N+
Sbjct: 132 TVAALPMLKQSNGSIVVVSSLAGKVA-YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVS 190
Query: 557 VNCLAPGITKTKFA 570
+ G+ T+ A
Sbjct: 191 ITLCVLGLIDTETA 204
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 2/180 (1%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L GK +VT +S GIG +A L+ GA VV+++R + + K V + G +
Sbjct: 13 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 72
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
+ ++ A K GG+D+L+ N N + + +V K EVN S +L
Sbjct: 73 TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHV-RKSMEVNFLSYVVL 131
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
T LP +++ N +A + ++ AYS SK AL G ++ ++ + + V+
Sbjct: 132 TVAALPMLKQSNGSIVVVSSLAGKVA-YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVS 190
>pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r,
F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3-
Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone
pdb|3CH6|B Chain B, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r,
F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3-
Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone
pdb|3CH6|D Chain D, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r,
F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3-
Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone
pdb|3CH6|E Chain E, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r,
F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3-
Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone
pdb|3TFQ|A Chain A, Crystal Structure Of 11b-Hsd1 Double Mutant (L262r, F278e)
Complexed With
8-{[(2-Cyanopyridin-3-Yl)methyl]sulfanyl}-6-Hydroxy-3,
4-Dihydro- 1h-Pyrano[3,4-C]pyridine-5-Carbonitrile
pdb|3TFQ|B Chain B, Crystal Structure Of 11b-Hsd1 Double Mutant (L262r, F278e)
Complexed With
8-{[(2-Cyanopyridin-3-Yl)methyl]sulfanyl}-6-Hydroxy-3,
4-Dihydro- 1h-Pyrano[3,4-C]pyridine-5-Carbonitrile
pdb|3TFQ|D Chain D, Crystal Structure Of 11b-Hsd1 Double Mutant (L262r, F278e)
Complexed With
8-{[(2-Cyanopyridin-3-Yl)methyl]sulfanyl}-6-Hydroxy-3,
4-Dihydro- 1h-Pyrano[3,4-C]pyridine-5-Carbonitrile
pdb|3TFQ|E Chain E, Crystal Structure Of 11b-Hsd1 Double Mutant (L262r, F278e)
Complexed With
8-{[(2-Cyanopyridin-3-Yl)methyl]sulfanyl}-6-Hydroxy-3,
4-Dihydro- 1h-Pyrano[3,4-C]pyridine-5-Carbonitrile
Length = 286
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 4/194 (2%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L GK +VT +S GIG +A L+ GA VV+++R + + K V + G +
Sbjct: 26 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 85
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
+ ++ A K GG+D+L+ N N + + +V K EVN S +L
Sbjct: 86 TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHV-RKSMEVNFLSYVVL 144
Query: 499 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQD--LASENIR 556
T LP +++ N +A + ++ AYS SK AL G ++ ++ ++ N+
Sbjct: 145 TVAALPMLKQSNGSIVVVSSLAGKVA-YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVS 203
Query: 557 VNCLAPGITKTKFA 570
+ G+ T+ A
Sbjct: 204 ITLCVLGLIDTETA 217
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 2/180 (1%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L GK +VT +S GIG +A L+ GA VV+++R + + K V + G +
Sbjct: 26 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 85
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
+ ++ A K GG+D+L+ N N + + +V K EVN S +L
Sbjct: 86 TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHV-RKSMEVNFLSYVVL 144
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
T LP +++ N +A + ++ AYS SK AL G ++ ++ + + V+
Sbjct: 145 TVAALPMLKQSNGSIVVVSSLAGKVA-YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVS 203
>pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1
Length = 260
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 87/207 (42%), Gaps = 9/207 (4%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
+ G+V VVT +S GIG IA +L GA+V I+ R + + Q G Q + VVC
Sbjct: 3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVP-VVC 61
Query: 439 HVAKKEDRQKLFEHAEK-KFGGIDILVSNA------AVNPATGPVVECPENVWDKIFEVN 491
+++ + + LFE ++ + G +D+LV+NA +N E P ++WD I V
Sbjct: 62 DSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVG 121
Query: 492 VKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLA 551
++ + + + L + Y V K A L A +L
Sbjct: 122 LRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQ-YMFNVPYGVGKAACDKLAADCAHELR 180
Query: 552 SENIRVNCLAPGITKTKFAAALYETEE 578
+ L PGI +T+ EE
Sbjct: 181 RHGVSCVSLWPGIVQTELLKEHMAKEE 207
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 66/128 (51%), Gaps = 8/128 (6%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
+ G+V VVT +S GIG IA +L GA+V I+ R + + Q G Q + VVC
Sbjct: 3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVP-VVC 61
Query: 70 HVAKKEDRQKLFEHAEK-KFGGIDILVSNA------AVNPATGPVVECPENVWDKIFEVN 122
+++ + + LFE ++ + G +D+LV+NA +N E P ++WD I V
Sbjct: 62 DSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVG 121
Query: 123 VKSTFLLT 130
++ + +
Sbjct: 122 LRGHYFCS 129
>pdb|4IXT|A Chain A, Structure Of A 37-fold Mutant Of Halohydrin Dehalogenase
(hhec) Bound To Ethyl (r)-4-cyano-3-hydroxybutyrate
pdb|4IXT|B Chain B, Structure Of A 37-fold Mutant Of Halohydrin Dehalogenase
(hhec) Bound To Ethyl (r)-4-cyano-3-hydroxybutyrate
pdb|4IXW|A Chain A, Halohydrin Dehalogenase (hhec) Bound To Ethyl
(2s)-oxiran-2-ylacetate
pdb|4IXW|B Chain B, Halohydrin Dehalogenase (hhec) Bound To Ethyl
(2s)-oxiran-2-ylacetate
pdb|4IY1|A Chain A, Structure Of A 37-fold Mutant Of Halohydrin Dehalogenase
(hhec) With Chloride Bound
pdb|4IY1|B Chain B, Structure Of A 37-fold Mutant Of Halohydrin Dehalogenase
(hhec) With Chloride Bound
Length = 254
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 101/248 (40%), Gaps = 15/248 (6%)
Query: 384 AVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAKK 443
A+VT G A RLS G +V + ++ +E + Q I +
Sbjct: 4 AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKHQDE-LEAFAETYPQLIP------MSE 56
Query: 444 EDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECP-ENVWDKIFEVNVKSTFLLTQEV 502
++ +L E G +DILVSN P+ + E+ D + + +K F L V
Sbjct: 57 QEPVELIEAVTSALGHVDILVSNDIAPVEWRPIDKYAVEDYRDMVEALQIKP-FALANAV 115
Query: 503 LPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCLAP 562
+++R P+K L Y+ ++ L A++++L NI V +AP
Sbjct: 116 ASQMKRRKSGHIIFITSAASFGPWKELSTYASARAGASALANALSKELGEHNIPVFAIAP 175
Query: 563 -----GITKTKFAAALYETEEAHEIAVSN-VPMGRLAVPDEMGGIVAFLCSDDASYITGE 616
G + + + ++T H V + RL E+G +V FL S Y+TG+
Sbjct: 176 NGVDSGDSPYYYPSEPWKTSPEHVAWVRKYTALQRLGTQKELGELVTFLASGSCDYLTGQ 235
Query: 617 VIVAAGGM 624
V AGG
Sbjct: 236 VFWLAGGF 243
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 72/180 (40%), Gaps = 9/180 (5%)
Query: 15 AVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAKK 74
A+VT G A RLS G +V + ++ +E + Q I +
Sbjct: 4 AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKHQDE-LEAFAETYPQLIP------MSE 56
Query: 75 EDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECP-ENVWDKIFEVNVKSTFLLTQEV 133
++ +L E G +DILVSN P+ + E+ D + + +K F L V
Sbjct: 57 QEPVELIEAVTSALGHVDILVSNDIAPVEWRPIDKYAVEDYRDMVEALQIKP-FALANAV 115
Query: 134 LPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCLAP 193
+++R P+K L Y+ ++ L A++++L NI V +AP
Sbjct: 116 ASQMKRRKSGHIIFITSAASFGPWKELSTYASARAGASALANALSKELGEHNIPVFAIAP 175
>pdb|4E4Y|A Chain A, The Crystal Structure Of A Short Chain Dehydrogenase
Family Protein From Francisella Tularensis Subsp.
Tularensis Schu S4
Length = 244
Score = 60.5 bits (145), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 9/106 (8%)
Query: 531 AYSVSKTALLGLTKAVAQDLASENIRVNCLAPGITKTKFAAALYET---------EEAHE 581
AY++SK A+ TK++A DLA IRVN + PG T L + +EA +
Sbjct: 139 AYTLSKGAIAQXTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQK 198
Query: 582 IAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVIVAAGGMQSR 627
P+ R+A P E+ +V FL SD + + TG +I GG ++
Sbjct: 199 QEEKEFPLNRIAQPQEIAELVIFLLSDKSKFXTGGLIPIDGGYTAQ 244
Score = 35.8 bits (81), Expect = 0.080, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 162 AYSVSKTALLGLTKAVAQDLASENIRVNCLAPG 194
AY++SK A+ TK++A DLA IRVN + PG
Sbjct: 139 AYTLSKGAIAQXTKSLALDLAKYQIRVNTVCPG 171
Score = 35.8 bits (81), Expect = 0.083, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 640 AYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGDRMI 683
AY++SK A+ TK +A DLA IRVN + PG + T +I
Sbjct: 139 AYTLSKGAIAQXTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLI 182
>pdb|4EIT|A Chain A, Crystal Structure Of An Enoyl-(Acyl Carrier Protein)
Reductase From Bartonella Henselae
pdb|4EIT|B Chain B, Crystal Structure Of An Enoyl-(Acyl Carrier Protein)
Reductase From Bartonella Henselae
pdb|4EIT|C Chain C, Crystal Structure Of An Enoyl-(Acyl Carrier Protein)
Reductase From Bartonella Henselae
pdb|4EIT|D Chain D, Crystal Structure Of An Enoyl-(Acyl Carrier Protein)
Reductase From Bartonella Henselae
pdb|4EIT|E Chain E, Crystal Structure Of An Enoyl-(Acyl Carrier Protein)
Reductase From Bartonella Henselae
pdb|4EIT|F Chain F, Crystal Structure Of An Enoyl-(Acyl Carrier Protein)
Reductase From Bartonella Henselae
Length = 276
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 108/245 (44%), Gaps = 11/245 (4%)
Query: 379 LAGKVAVVT--ASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGV 436
L GK ++ A++ I + IAK S+ GA + + + E+ K VE L +E + G
Sbjct: 12 LYGKRGLILGLANNRSIAWGIAKTASSAGAELAFTYQGEA-XKKRVEPLAEEVKGFVCGH 70
Query: 437 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPA---TGPVVECPENVWDKIFEVNVK 493
C V+ +F EKK+G +D LV + +G V+ E+ + ++V
Sbjct: 71 -CDVSDSASIDAVFNTIEKKWGKLDFLVHAIGFSDKEELSGRYVDISESNFXXTXNISVY 129
Query: 494 STFLLTQEVLPYIRKRNXXXXXXXXXXXXLAP-FKLLGAYSVSKTALLGLTKAVAQDLAS 552
S LT+ + P + + G V+K AL K +A DL
Sbjct: 130 SLTALTKRAEKLXSDGGSILTLTYYGAEKVVPNYNVXG---VAKAALEASVKYLAVDLGP 186
Query: 553 ENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASY 612
++IRVN ++ G KT A+ + + + N P+ R +E+G +L SD +
Sbjct: 187 KHIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIEEVGDSALYLLSDLSRS 246
Query: 613 ITGEV 617
+TGEV
Sbjct: 247 VTGEV 251
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 83/191 (43%), Gaps = 11/191 (5%)
Query: 10 LTGKVAVVT--ASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGV 67
L GK ++ A++ I + IAK S+ GA + + + E+ K VE L +E + G
Sbjct: 12 LYGKRGLILGLANNRSIAWGIAKTASSAGAELAFTYQGEA-XKKRVEPLAEEVKGFVCGH 70
Query: 68 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPA---TGPVVECPENVWDKIFEVNVK 124
C V+ +F EKK+G +D LV + +G V+ E+ + ++V
Sbjct: 71 -CDVSDSASIDAVFNTIEKKWGKLDFLVHAIGFSDKEELSGRYVDISESNFXXTXNISVY 129
Query: 125 STFLLTQEVLPYIRKRNXXXXXXXXXXXXLAP-FKLLGAYSVSKTALLGLTKAVAQDLAS 183
S LT+ + P + + G V+K AL K +A DL
Sbjct: 130 SLTALTKRAEKLXSDGGSILTLTYYGAEKVVPNYNVXG---VAKAALEASVKYLAVDLGP 186
Query: 184 ENIRVNCLAPG 194
++IRVN ++ G
Sbjct: 187 KHIRVNAISAG 197
Score = 33.1 bits (74), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 643 VSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
V+K AL K +A DL P++IRVN ++ G I+T
Sbjct: 168 VAKAALEASVKYLAVDLGPKHIRVNAISAGPIKT 201
>pdb|3KZV|A Chain A, The Crystal Structure Of A Cytoplasmic Protein With
Unknown Function From Saccharomyces Cerevisiae
Length = 254
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 92/215 (42%), Gaps = 13/215 (6%)
Query: 381 GKVAVVTASSDGIGFAIAKRLSTEGASVVIS--SRKESNVNKAVETLQKEGHQKISGVVC 438
GKV +VT S GIG +I L + V+ +R E+ + K L+++ + VV
Sbjct: 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKK----LKEKYGDRFFYVVG 57
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
+ + ++L A K G ID LV+NA V V E N W K++++N S L
Sbjct: 58 DITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSL 117
Query: 499 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 558
LP ++K N + F GAY SK AL A LA+E +V
Sbjct: 118 VGIALPELKKTNGNVVFVSSDACNMY-FSSWGAYGSSKAAL----NHFAMTLANEERQVK 172
Query: 559 CL--APGITKTKFAAALYETEEAHEIAVSNVPMGR 591
+ APGI T + E ++ + M R
Sbjct: 173 AIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFR 207
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 84/188 (44%), Gaps = 13/188 (6%)
Query: 12 GKVAVVTASSDGIGFAIAKRLSAEGASVVIS--SRKESNVNKAVETLQKEGHQKISGVVC 69
GKV +VT S GIG +I L + V+ +R E+ + K L+++ + VV
Sbjct: 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKK----LKEKYGDRFFYVVG 57
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
+ + ++L A K G ID LV+NA V V E N W K++++N S L
Sbjct: 58 DITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSL 117
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
LP ++K N + F GAY SK AL A LA+E +V
Sbjct: 118 VGIALPELKKTNGNVVFVSSDACNMY-FSSWGAYGSSKAAL----NHFAMTLANEERQVK 172
Query: 190 CL--APGI 195
+ APGI
Sbjct: 173 AIAVAPGI 180
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 20/87 (22%)
Query: 674 IRTKFGDR---MIAMLSTD-----------KLYGGIDILVSNAAVNPANEPLVECSEV-- 717
++ K+GDR ++ ++ D K +G ID LV+NA V EP+ +E+
Sbjct: 44 LKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDSLVANAGVL---EPVQNVNEIDV 100
Query: 718 -VWDKIFDVNLKSSFLLTQEVLPYMRK 743
W K++D+N S L LP ++K
Sbjct: 101 NAWKKLYDINFFSIVSLVGIALPELKK 127
>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain
DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021
pdb|4DA9|B Chain B, Crystal Structure Of Putative Short-Chain
DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021
pdb|4DA9|C Chain C, Crystal Structure Of Putative Short-Chain
DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021
pdb|4DA9|D Chain D, Crystal Structure Of Putative Short-Chain
DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021
Length = 280
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 109/251 (43%), Gaps = 13/251 (5%)
Query: 383 VAVVTASSDGIGFAIAKRLSTEGASVVISSRKES-NVNKAVETLQKEGHQKISGVVCHVA 441
VA+VT GIG IA+ L+ G + I+ ++ V + L G + I + +A
Sbjct: 31 VAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIF-LRADLA 89
Query: 442 KKEDRQKLFEHAEKKFGGIDILVSNAAV-NPATGPVVEC-PENVWDKIFEVNVKSTFLLT 499
Q + +FG ID LV+NA + + ++ PEN +D I VN++ T T
Sbjct: 90 DLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPEN-FDTIVGVNLRGTVFFT 148
Query: 500 QEVLPYI-----RKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASEN 554
Q VL R +P +L Y SK L ++ +A LA
Sbjct: 149 QAVLKAXLASDARASRSIINITSVSAVXTSPERL--DYCXSKAGLAAFSQGLALRLAETG 206
Query: 555 IRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYIT 614
I V + PGI ++ AA+ + I VP R P+++G IVA L + T
Sbjct: 207 IAVFEVRPGIIRSDXTAAVSGKYDGL-IESGLVPXRRWGEPEDIGNIVAGLAGGQFGFAT 265
Query: 615 GEVIVAAGGMQ 625
G VI A GG+
Sbjct: 266 GSVIQADGGLS 276
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 82/190 (43%), Gaps = 12/190 (6%)
Query: 14 VAVVTASSDGIGFAIAKRLSAEGASVVISSRKES-NVNKAVETLQKEGHQKISGVVCHVA 72
VA+VT GIG IA+ L+A G + I+ ++ V + L G + I + +A
Sbjct: 31 VAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIF-LRADLA 89
Query: 73 KKEDRQKLFEHAEKKFGGIDILVSNAAV-NPATGPVVEC-PENVWDKIFEVNVKSTFLLT 130
Q + +FG ID LV+NA + + ++ PEN +D I VN++ T T
Sbjct: 90 DLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPEN-FDTIVGVNLRGTVFFT 148
Query: 131 QEVLPYI-----RKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASEN 185
Q VL R +P +L Y SK L ++ +A LA
Sbjct: 149 QAVLKAXLASDARASRSIINITSVSAVXTSPERL--DYCXSKAGLAAFSQGLALRLAETG 206
Query: 186 IRVNCLAPGI 195
I V + PGI
Sbjct: 207 IAVFEVRPGI 216
>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
pdb|3QLJ|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
pdb|3QLJ|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
pdb|3QLJ|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
pdb|3QLJ|E Chain E, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
pdb|3QLJ|F Chain F, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
Length = 322
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 111/259 (42%), Gaps = 24/259 (9%)
Query: 381 GKVAVVTASSDGIGFAIAKRLSTEGASVVIS----------SRKESNVNKAVETLQKEGH 430
G+V +VT + GIG A A + EGA VV++ + S V+ + G
Sbjct: 27 GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGG 86
Query: 431 QKISGVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEV 490
+ ++ +VA + L + A + FGG+D+LV+NA + + E +D + V
Sbjct: 87 EAVAD-GSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDR-MIANTSEEEFDAVIAV 144
Query: 491 NVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLL------GAYSVSKTALLGLTK 544
++K F + Y R + + L G YS +K + LT
Sbjct: 145 HLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATLTL 204
Query: 545 AVAQDLASENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAF 604
A ++ + VN +AP +T+ + ET A +A + +A P+ + +V +
Sbjct: 205 VGAAEMGRYGVTVNAIAPS-ARTR----MTETVFAEMMATQDQDFDAMA-PENVSPLVVW 258
Query: 605 LCSDDASYITGEVIVAAGG 623
L S +A +TG+V GG
Sbjct: 259 LGSAEARDVTGKVFEVEGG 277
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 84/200 (42%), Gaps = 18/200 (9%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVIS----------SRKESNVNKAVETLQKE 59
+ G+V +VT + GIG A A +AEGA VV++ + S V+ +
Sbjct: 25 VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA 84
Query: 60 GHQKISGVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIF 119
G + ++ +VA + L + A + FGG+D+LV+NA + + E +D +
Sbjct: 85 GGEAVAD-GSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDR-MIANTSEEEFDAVI 142
Query: 120 EVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLL------GAYSVSKTALLGL 173
V++K F + Y R + + L G YS +K + L
Sbjct: 143 AVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATL 202
Query: 174 TKAVAQDLASENIRVNCLAP 193
T A ++ + VN +AP
Sbjct: 203 TLVGAAEMGRYGVTVNAIAP 222
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 12/73 (16%)
Query: 670 APGLIRTKFGDRMIAMLSTDKLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKS 729
A GLI+T + +GG+D+LV+NA + + + SE +D + V+LK
Sbjct: 101 AAGLIQTAV-----------ETFGGLDVLVNNAGI-VRDRMIANTSEEEFDAVIAVHLKG 148
Query: 730 SFLLTQEVLPYMR 742
F + Y R
Sbjct: 149 HFATMRHAAAYWR 161
>pdb|1ZMO|A Chain A, Apo Structure Of Haloalcohol Dehalogenase Hhea Of
Arthrobacter Sp. Ad2
pdb|1ZMO|B Chain B, Apo Structure Of Haloalcohol Dehalogenase Hhea Of
Arthrobacter Sp. Ad2
pdb|1ZMO|C Chain C, Apo Structure Of Haloalcohol Dehalogenase Hhea Of
Arthrobacter Sp. Ad2
pdb|1ZMO|D Chain D, Apo Structure Of Haloalcohol Dehalogenase Hhea Of
Arthrobacter Sp. Ad2
pdb|1ZMO|E Chain E, Apo Structure Of Haloalcohol Dehalogenase Hhea Of
Arthrobacter Sp. Ad2
pdb|1ZMO|F Chain F, Apo Structure Of Haloalcohol Dehalogenase Hhea Of
Arthrobacter Sp. Ad2
pdb|1ZMO|G Chain G, Apo Structure Of Haloalcohol Dehalogenase Hhea Of
Arthrobacter Sp. Ad2
pdb|1ZMO|H Chain H, Apo Structure Of Haloalcohol Dehalogenase Hhea Of
Arthrobacter Sp. Ad2
Length = 244
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 61/248 (24%), Positives = 101/248 (40%), Gaps = 16/248 (6%)
Query: 383 VAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAK 442
+A+VT + G A + L+ +G +VV +++ A E + E G + +
Sbjct: 3 IALVTHARHFAGPAAVEALTQDGYTVVC---HDASFADAAERQRFESEN--PGTIALAEQ 57
Query: 443 KEDR--QKLFEHAEKKFGGIDILVSNAAVNPATG--PVVECPENVWDKIFEVNVKSTFLL 498
K +R +H E ID +VSN + P+ E ++FE LL
Sbjct: 58 KPERLVDATLQHGE----AIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILL 113
Query: 499 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 558
Q + +R P Y ++ A + L ++ A+ L+ + I +
Sbjct: 114 LQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRDGILLY 173
Query: 559 CLAPGI--TKTKFAAALYETE-EAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITG 615
+ P T F + +E E E +VP+GRL PDEMG ++ FL S A+ I G
Sbjct: 174 AIGPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFLASRRAAPIVG 233
Query: 616 EVIVAAGG 623
+ GG
Sbjct: 234 QFFAFTGG 241
>pdb|1FJH|A Chain A, The Crystal Structure Of 3-Alpha-Hydroxysteroid
Dehydrogenase From Comamonas Testosteroni, A Member Of
The Short Chain DehydrogenaseREDUCTASE FAMILY
pdb|1FJH|B Chain B, The Crystal Structure Of 3-Alpha-Hydroxysteroid
Dehydrogenase From Comamonas Testosteroni, A Member Of
The Short Chain DehydrogenaseREDUCTASE FAMILY
pdb|1FK8|A Chain A, The Crystal Structure Of The Binary Complex With Nad Of 3-
Alpha-Hydroxysteroid Dehydrogenase From Comamonas
Testosteroni, A Member Of The Short Chain
DehydrogenaseREDUCTASE FAMILY
pdb|1FK8|B Chain B, The Crystal Structure Of The Binary Complex With Nad Of 3-
Alpha-Hydroxysteroid Dehydrogenase From Comamonas
Testosteroni, A Member Of The Short Chain
DehydrogenaseREDUCTASE FAMILY
Length = 257
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 531 AYSVSKTALLGLTKAVAQDLASENIRVNCLAPGITKTKF-AAALYETEEAHEIAVSNVPM 589
AY+ SK AL + A +R+N +APG T+T A L + IA PM
Sbjct: 154 AYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPM 213
Query: 590 GRLAVPDEMGGIVAFLCSDDASYITGEVIVAAGGMQS 626
GR A P EM ++AFL S ASY+ G IV GG+ +
Sbjct: 214 GRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDA 250
>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With
Nadp And Sepiapterin
pdb|2BD0|B Chain B, Chlorobium Tepidum Sepiapterin Reductase Complexed With
Nadp And Sepiapterin
pdb|2BD0|C Chain C, Chlorobium Tepidum Sepiapterin Reductase Complexed With
Nadp And Sepiapterin
pdb|2BD0|D Chain D, Chlorobium Tepidum Sepiapterin Reductase Complexed With
Nadp And Sepiapterin
Length = 244
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 9/192 (4%)
Query: 383 VAVVTASSDGIGFAIAKRLSTEGAS-------VVISSRKESNVNKAVETLQKEGHQKISG 435
+ ++T + GIG AIA + +V+SSR +++ K + EG
Sbjct: 4 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEG-ALTDT 62
Query: 436 VVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKST 495
+ ++ D ++L H +++G ID LV+NA V G + + E +D N+K T
Sbjct: 63 ITADISDMADVRRLTTHIVERYGHIDCLVNNAGVG-RFGALSDLTEEDFDYTMNTNLKGT 121
Query: 496 FLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 555
F LTQ + + +++ F+ Y +SK GL + + N+
Sbjct: 122 FFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNV 181
Query: 556 RVNCLAPGITKT 567
R+ + PG T
Sbjct: 182 RITDVQPGAVYT 193
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/188 (23%), Positives = 81/188 (43%), Gaps = 9/188 (4%)
Query: 14 VAVVTASSDGIGFAIAKRLSAEGAS-------VVISSRKESNVNKAVETLQKEGHQKISG 66
+ ++T + GIG AIA + +V+SSR +++ K + EG
Sbjct: 4 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEG-ALTDT 62
Query: 67 VVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKST 126
+ ++ D ++L H +++G ID LV+NA V G + + E +D N+K T
Sbjct: 63 ITADISDMADVRRLTTHIVERYGHIDCLVNNAGVG-RFGALSDLTEEDFDYTMNTNLKGT 121
Query: 127 FLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI 186
F LTQ + + +++ F+ Y +SK GL + + N+
Sbjct: 122 FFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNV 181
Query: 187 RVNCLAPG 194
R+ + PG
Sbjct: 182 RITDVQPG 189
Score = 38.9 bits (89), Expect = 0.011, Method: Composition-based stats.
Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 651 LTKVVAEDLAPENIRVNCLAPGLIRTKFGDRMIAMLSTDKL-------YGGIDILVSNAA 703
L+ A DL E I + C A G + + M +L YG ID LV+NA
Sbjct: 38 LSSRTAADL--EKISLECRAEGALTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAG 95
Query: 704 VNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRKK 744
V L + +E +D + NLK +F LTQ + M ++
Sbjct: 96 VGRFG-ALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQ 135
>pdb|3TL3|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE
FROM Mycobacterium Ulcerans
pdb|3TL3|B Chain B, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE
FROM Mycobacterium Ulcerans
Length = 257
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 107/250 (42%), Gaps = 28/250 (11%)
Query: 383 VAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAK 442
VAVVT + G+G A KRL GA VV+ + +V V L + V A
Sbjct: 11 VAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV---VADLGDRARFAAADVTDEAAV 67
Query: 443 KEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWD-----KIFEVNVKSTFL 497
+ AE G + I+V+ A A V + V+ KI ++N+ +F
Sbjct: 68 A----SALDLAET-MGTLRIVVNCAGTGNAI--RVLSRDGVFSLAAFRKIVDINLVGSFN 120
Query: 498 LTQEVLPYIRKR-----NXXXXXXXXXXXXLAPFK-LLG--AYSVSKTALLGLTKAVAQD 549
+ + I K N +A F +G AYS SK ++G+T +A+D
Sbjct: 121 VLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARD 180
Query: 550 LASENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPM-GRLAVPDEMGGIVAFLCSD 608
LAS IRV +APG+ T A+L EEA VP RL PDE G + + +
Sbjct: 181 LASHRIRVMTIAPGLFDTPLLASL--PEEARASLGKQVPHPSRLGNPDEYGALAVHIIEN 238
Query: 609 DASYITGEVI 618
+ GEVI
Sbjct: 239 --PMLNGEVI 246
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 84/195 (43%), Gaps = 23/195 (11%)
Query: 14 VAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAK 73
VAVVT + G+G A KRL GA VV+ + +V V L + V A
Sbjct: 11 VAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV---VADLGDRARFAAADVTDEAAV 67
Query: 74 KEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWD-----KIFEVNVKSTFL 128
+ AE G + I+V+ A A V + V+ KI ++N+ +F
Sbjct: 68 A----SALDLAET-MGTLRIVVNCAGTGNAI--RVLSRDGVFSLAAFRKIVDINLVGSFN 120
Query: 129 LTQEVLPYIRKR-----NXXXXXXXXXXXXLAPFK-LLG--AYSVSKTALLGLTKAVAQD 180
+ + I K N +A F +G AYS SK ++G+T +A+D
Sbjct: 121 VLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARD 180
Query: 181 LASENIRVNCLAPGI 195
LAS IRV +APG+
Sbjct: 181 LASHRIRVMTIAPGL 195
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 23/39 (58%)
Query: 640 AYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
AYS SK + G+T +A DLA IRV +APGL T
Sbjct: 162 AYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPL 200
>pdb|3GMD|A Chain A, Structure-Based Design Of 7-Azaindole-Pyrrolidines As
Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I
pdb|3GMD|B Chain B, Structure-Based Design Of 7-Azaindole-Pyrrolidines As
Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I
pdb|3GMD|C Chain C, Structure-Based Design Of 7-Azaindole-Pyrrolidines As
Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I
pdb|3GMD|D Chain D, Structure-Based Design Of 7-Azaindole-Pyrrolidines As
Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I
pdb|3GMD|E Chain E, Structure-Based Design Of 7-Azaindole-Pyrrolidines As
Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I
pdb|3GMD|F Chain F, Structure-Based Design Of 7-Azaindole-Pyrrolidines As
Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I
pdb|3GMD|G Chain G, Structure-Based Design Of 7-Azaindole-Pyrrolidines As
Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I
pdb|3GMD|H Chain H, Structure-Based Design Of 7-Azaindole-Pyrrolidines As
Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I
Length = 264
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 4/194 (2%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L GK +VT +S GIG +A LS GA VV+++R E + K V + G +
Sbjct: 7 LQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASAHYIAG 66
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
+ ++ A K GG+D+L+ N + + +V ++ EVN S ++
Sbjct: 67 TMEDMTFAEQFIVKAGKLMGGLDMLILNHITQTSLSLFHDDIHSVR-RVMEVNFLSYVVM 125
Query: 499 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDL--ASENIR 556
+ LP +++ N + + ++ YS SK AL G + +L N+
Sbjct: 126 STAALPMLKQSNGSIAVISSLAGKVT-YPMVAPYSASKFALDGFFSTIRTELYITKVNVS 184
Query: 557 VNCLAPGITKTKFA 570
+ G+ T+ A
Sbjct: 185 ITLCVLGLIDTETA 198
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 79/180 (43%), Gaps = 2/180 (1%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L GK +VT +S GIG +A LS GA VV+++R E + K V + G +
Sbjct: 7 LQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASAHYIAG 66
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
+ ++ A K GG+D+L+ N + + +V ++ EVN S ++
Sbjct: 67 TMEDMTFAEQFIVKAGKLMGGLDMLILNHITQTSLSLFHDDIHSVR-RVMEVNFLSYVVM 125
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
+ LP +++ N + + ++ YS SK AL G + +L + V+
Sbjct: 126 STAALPMLKQSNGSIAVISSLAGKVT-YPMVAPYSASKFALDGFFSTIRTELYITKVNVS 184
>pdb|1ENO|A Chain A, Brassica Napus Enoyl Acp ReductaseNAD BINARY COMPLEX AT PH
8.0 AND Room Temperature
pdb|1ENP|A Chain A, Brassica Napus Enoyl Acp ReductaseNADH BINARY COMPLEX AT
PH 8.0 AND Room Temperature
Length = 312
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 78/182 (42%), Gaps = 3/182 (1%)
Query: 447 QKLFEHAEKKFGGIDILVSNAAVNP-ATGPVVECPENVWDKIFEVNVKSTFLLTQEVLPY 505
Q+ E + FG IDILV + A P + P++E + + S L LP
Sbjct: 117 QEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPI 176
Query: 506 IRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLA-SENIRVNCLAPGI 564
+ + P G S +K AL T+ +A + +NIRVN ++ G
Sbjct: 177 MNPGGASISLTYIASERIIP-GYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGP 235
Query: 565 TKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVIVAAGGM 624
++ A A+ + E + +N P+ + DE+G AFL S AS ITG I G+
Sbjct: 236 LGSRAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGL 295
Query: 625 QS 626
S
Sbjct: 296 NS 297
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 85/223 (38%), Gaps = 42/223 (18%)
Query: 10 LTGKVAVVTASSD--GIGFAIAKRLSAEGASVVISSRKES-NVNKAVETLQKEGHQKIS- 65
L GK A + +D G G+A+AK L+A GA +++ + + N+ ET + G S
Sbjct: 16 LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNI---FETSLRRGKFDQSR 72
Query: 66 ----GVVCHVAKKEDRQKLFEHAE----------------------------KKFGGIDI 93
G + + K +F++ E + FG IDI
Sbjct: 73 VLPDGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDI 132
Query: 94 LVSNAAVNP-ATGPVVECPENVWDKIFEVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXX 152
LV + A P + P++E + + S L LP +
Sbjct: 133 LVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASE 192
Query: 153 XLAPFKLLGAYSVSKTALLGLTKAVAQDLA-SENIRVNCLAPG 194
+ P G S +K AL T+ +A + +NIRVN ++ G
Sbjct: 193 RIIP-GYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAG 234
>pdb|1D7O|A Chain A, Crystal Structure Of Brassica Napus Enoyl Acyl Carrier
Protein Reductase Complexed With Nad And Triclosan
Length = 297
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 78/182 (42%), Gaps = 3/182 (1%)
Query: 447 QKLFEHAEKKFGGIDILVSNAAVNP-ATGPVVECPENVWDKIFEVNVKSTFLLTQEVLPY 505
Q+ E + FG IDILV + A P + P++E + + S L LP
Sbjct: 107 QEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPI 166
Query: 506 IRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLA-SENIRVNCLAPGI 564
+ + P G S +K AL T+ +A + +NIRVN ++ G
Sbjct: 167 MNPGGASISLTYIASERIIP-GYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGP 225
Query: 565 TKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVIVAAGGM 624
++ A A+ + E + +N P+ + DE+G AFL S AS ITG I G+
Sbjct: 226 LGSRAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGL 285
Query: 625 QS 626
S
Sbjct: 286 NS 287
Score = 33.1 bits (74), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 84/220 (38%), Gaps = 36/220 (16%)
Query: 10 LTGKVAVVTASSD--GIGFAIAKRLSAEGASVVISSRKES-NVNKAVETLQKEGHQKI-- 64
L GK A + +D G G+A+AK L+A GA +++ + + N+ + K ++
Sbjct: 6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLP 65
Query: 65 SGVVCHVAKKEDRQKLFEHAE----------------------------KKFGGIDILVS 96
G + + K +F++ E + FG IDILV
Sbjct: 66 DGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVH 125
Query: 97 NAAVNP-ATGPVVECPENVWDKIFEVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLA 155
+ A P + P++E + + S L LP + +
Sbjct: 126 SLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERII 185
Query: 156 PFKLLGAYSVSKTALLGLTKAVAQDLA-SENIRVNCLAPG 194
P G S +K AL T+ +A + +NIRVN ++ G
Sbjct: 186 P-GYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAG 224
>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|B Chain B, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|C Chain C, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|D Chain D, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|E Chain E, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|F Chain F, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|G Chain G, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|H Chain H, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|I Chain I, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|J Chain J, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
Length = 281
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 7/199 (3%)
Query: 382 KVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 441
KV +VT +S G G AIA+ G +V+ ++R+ +A++ L + + V
Sbjct: 6 KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARR----TEALDDLVAAYPDRAEAISLDVT 61
Query: 442 KKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 501
E + ++G +D+LV+NA G E E +FE++V LT+
Sbjct: 62 DGERIDVVAADVLARYGRVDVLVNNAG-RTQVGAFEETTERELRDLFELHVFGPARLTRA 120
Query: 502 VLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCLA 561
+LP R+R F AYS +K AL L++ +A ++A I+V +
Sbjct: 121 LLPQXRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVE 180
Query: 562 PGITKTKF--AAALYETEE 578
PG +T A Y +EE
Sbjct: 181 PGAFRTNLFGKGAAYFSEE 199
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 5/184 (2%)
Query: 11 TGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCH 70
+ KV +VT +S G G AIA+ A G +V+ ++R+ +A++ L + +
Sbjct: 4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARR----TEALDDLVAAYPDRAEAISLD 59
Query: 71 VAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLT 130
V E + ++G +D+LV+NA G E E +FE++V LT
Sbjct: 60 VTDGERIDVVAADVLARYGRVDVLVNNAG-RTQVGAFEETTERELRDLFELHVFGPARLT 118
Query: 131 QEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNC 190
+ +LP R+R F AYS +K AL L++ +A ++A I+V
Sbjct: 119 RALLPQXRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLI 178
Query: 191 LAPG 194
+ PG
Sbjct: 179 VEPG 182
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 633 VEFRFIGAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKFGDRMIAMLS 687
+ F AYS +K AL L++ +A+++AP I+V + PG RT + A S
Sbjct: 143 LSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFS 197
>pdb|3NRC|A Chain A, Crystal Stucture Of The Francisella Tularensis Enoyl-Acyl
Carrier Protein Reductase (Fabi) In Complex With Nad+
And Triclosan
pdb|3NRC|B Chain B, Crystal Stucture Of The Francisella Tularensis Enoyl-Acyl
Carrier Protein Reductase (Fabi) In Complex With Nad+
And Triclosan
pdb|3UIC|A Chain A, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|B Chain B, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|C Chain C, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|D Chain D, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|E Chain E, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|F Chain F, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|G Chain G, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|H Chain H, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|I Chain I, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|J Chain J, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|K Chain K, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|L Chain L, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|M Chain M, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|N Chain N, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|O Chain O, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
pdb|3UIC|P Chain P, Crystal Structure Of Fabi, An Enoyl Reductase From F.
Tularensis, In Complex With A Novel And Potent Inhibitor
Length = 280
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 14/248 (5%)
Query: 379 LAGKVAVVTA--SSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGV 436
LAGK ++T S+ I + IAK + EGA + + + VE L E + +
Sbjct: 24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAE-FNPAAVL 80
Query: 437 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPAT---GPVVEC-PENVWDKIFEVNV 492
C V ++ + LF K + G+D +V + A P G ++C + +++
Sbjct: 81 PCDVISDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISA 140
Query: 493 KSTFLLTQEVLPYIRKRNXXXXXXXX--XXXXLAPFKLLGAYSVSKTALLGLTKAVAQDL 550
S L +E ++ RN + + +G V+K +L + A L
Sbjct: 141 YSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPSYNTMG---VAKASLEATVRYTALAL 197
Query: 551 ASENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDA 610
+ I+VN ++ G KT A+ + ++ + P+ + E+G VAFLCSD A
Sbjct: 198 GEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFLCSDMA 257
Query: 611 SYITGEVI 618
+ ITGEV+
Sbjct: 258 TGITGEVV 265
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 79/193 (40%), Gaps = 14/193 (7%)
Query: 10 LTGKVAVVTA--SSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGV 67
L GK ++T S+ I + IAK + EGA + + + VE L E + +
Sbjct: 24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAE-FNPAAVL 80
Query: 68 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPAT---GPVVEC-PENVWDKIFEVNV 123
C V ++ + LF K + G+D +V + A P G ++C + +++
Sbjct: 81 PCDVISDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISA 140
Query: 124 KSTFLLTQEVLPYIRKRNXXXXXXXX--XXXXLAPFKLLGAYSVSKTALLGLTKAVAQDL 181
S L +E ++ RN + + +G V+K +L + A L
Sbjct: 141 YSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPSYNTMG---VAKASLEATVRYTALAL 197
Query: 182 ASENIRVNCLAPG 194
+ I+VN ++ G
Sbjct: 198 GEDGIKVNAVSAG 210
>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase
((+)-Trans-Carveol Dehydrogenase) From Mycobacterium
Avium
pdb|3UVE|B Chain B, Crystal Structure Of Carveol Dehydrogenase
((+)-Trans-Carveol Dehydrogenase) From Mycobacterium
Avium
pdb|3UVE|C Chain C, Crystal Structure Of Carveol Dehydrogenase
((+)-Trans-Carveol Dehydrogenase) From Mycobacterium
Avium
pdb|3UVE|D Chain D, Crystal Structure Of Carveol Dehydrogenase
((+)-Trans-Carveol Dehydrogenase) From Mycobacterium
Avium
Length = 286
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 108/268 (40%), Gaps = 29/268 (10%)
Query: 377 SRLAGKVAVVTASSDGIGFAIAKRLSTEG-------------ASVVISSRKESNVNKAVE 423
R+ GKVA VT ++ G G + A RL+ EG A VV ++ S E
Sbjct: 7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAE 66
Query: 424 T--LQKEGHQKISGVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPE 481
T L K +++I V + + + ++ G +DI+V+NA + + + E
Sbjct: 67 TADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSE 126
Query: 482 NVWDKIFEVNVKSTFLLTQEVLPY-IRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALL 540
W ++ ++N+ + + +P+ I L + G Y +K ++
Sbjct: 127 EDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVV 186
Query: 541 GLTKAVAQDLASENIRVNCLAPGITKTKF-----AAALYETEEAHEIAVSNVPMGRL--- 592
GL +A +L IRVN + P KT ++ + + P+ ++
Sbjct: 187 GLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHT 246
Query: 593 -----AVPDEMGGIVAFLCSDDASYITG 615
P ++ V F SD+A YITG
Sbjct: 247 LPIPWVEPIDISNAVLFFASDEARYITG 274
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 16/202 (7%)
Query: 8 SRLTGKVAVVTASSDGIGFAIAKRLSAEG-------------ASVVISSRKESNVNKAVE 54
R+ GKVA VT ++ G G + A RL+ EG A VV ++ S E
Sbjct: 7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAE 66
Query: 55 T--LQKEGHQKISGVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPE 112
T L K +++I V + + + ++ G +DI+V+NA + + + E
Sbjct: 67 TADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSE 126
Query: 113 NVWDKIFEVNVKSTFLLTQEVLPY-IRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALL 171
W ++ ++N+ + + +P+ I L + G Y +K ++
Sbjct: 127 EDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVV 186
Query: 172 GLTKAVAQDLASENIRVNCLAP 193
GL +A +L IRVN + P
Sbjct: 187 GLMRAFGVELGQHMIRVNSVHP 208
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 693 GGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYM 741
G +DI+V+NA + + L + SE W ++ D+NL + + +P+M
Sbjct: 103 GRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHM 151
>pdb|2JJY|A Chain A, Crystal Structure Of Francisella Tularensis Enoyl
Reductase (Ftfabi) With Bound Nad
pdb|2JJY|B Chain B, Crystal Structure Of Francisella Tularensis Enoyl
Reductase (Ftfabi) With Bound Nad
pdb|2JJY|C Chain C, Crystal Structure Of Francisella Tularensis Enoyl
Reductase (Ftfabi) With Bound Nad
pdb|2JJY|D Chain D, Crystal Structure Of Francisella Tularensis Enoyl
Reductase (Ftfabi) With Bound Nad
Length = 268
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 14/248 (5%)
Query: 379 LAGKVAVVTA--SSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGV 436
LAGK ++T S+ I + IAK + EGA + + + VE L E + +
Sbjct: 4 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAE-FNPAAVL 60
Query: 437 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPAT---GPVVEC-PENVWDKIFEVNV 492
C V ++ + LF K + G+D +V + A P G ++C + +++
Sbjct: 61 PCDVISDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISA 120
Query: 493 KSTFLLTQEVLPYIRKRNXXXXXXXX--XXXXLAPFKLLGAYSVSKTALLGLTKAVAQDL 550
S L +E ++ RN + + +G V+K +L + A L
Sbjct: 121 YSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPSYNTMG---VAKASLEATVRYTALAL 177
Query: 551 ASENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDA 610
+ I+VN ++ G KT A+ + ++ + P+ + E+G VAFLCSD A
Sbjct: 178 GEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFLCSDMA 237
Query: 611 SYITGEVI 618
+ ITGEV+
Sbjct: 238 TGITGEVV 245
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 79/193 (40%), Gaps = 14/193 (7%)
Query: 10 LTGKVAVVTA--SSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGV 67
L GK ++T S+ I + IAK + EGA + + + VE L E + +
Sbjct: 4 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAE-FNPAAVL 60
Query: 68 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPAT---GPVVEC-PENVWDKIFEVNV 123
C V ++ + LF K + G+D +V + A P G ++C + +++
Sbjct: 61 PCDVISDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISA 120
Query: 124 KSTFLLTQEVLPYIRKRNXXXXXXXX--XXXXLAPFKLLGAYSVSKTALLGLTKAVAQDL 181
S L +E ++ RN + + +G V+K +L + A L
Sbjct: 121 YSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPSYNTMG---VAKASLEATVRYTALAL 177
Query: 182 ASENIRVNCLAPG 194
+ I+VN ++ G
Sbjct: 178 GEDGIKVNAVSAG 190
>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical
Analysis Of The Final Step In The Biosynthesis Of The
Beta- Lactamase Inhibitor Clavulanic Acid
pdb|2JAP|B Chain B, Clavulanic Acid Dehydrogenase: Structural And Biochemical
Analysis Of The Final Step In The Biosynthesis Of The
Beta- Lactamase Inhibitor Clavulanic Acid
pdb|2JAP|C Chain C, Clavulanic Acid Dehydrogenase: Structural And Biochemical
Analysis Of The Final Step In The Biosynthesis Of The
Beta- Lactamase Inhibitor Clavulanic Acid
pdb|2JAP|D Chain D, Clavulanic Acid Dehydrogenase: Structural And Biochemical
Analysis Of The Final Step In The Biosynthesis Of The
Beta- Lactamase Inhibitor Clavulanic Acid
Length = 247
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 5/213 (2%)
Query: 377 SRLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGV 436
S L GKVA++T +S GIG A A+ L+ EGA+V I++R+ + + L G K+ +
Sbjct: 3 SALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAG-AKVHVL 61
Query: 437 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 496
VA ++ + GG+DILV+NA + GPV + W ++ + N+
Sbjct: 62 ELDVADRQGVDAAVASTVEALGGLDILVNNAGIM-LLGPVEDADTTDWTRMIDTNLLGLM 120
Query: 497 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 556
+T+ LP++ R+ + Y +K + ++ + Q++ +R
Sbjct: 121 YMTRAALPHLL-RSKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVR 179
Query: 557 VNCLAPGITKTKFAAALYE--TEEAHEIAVSNV 587
V + PG T T+ + T+E +E +S +
Sbjct: 180 VVVIEPGTTDTELRGHITHTATKEMYEQRISQI 212
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 50/187 (26%), Positives = 89/187 (47%), Gaps = 3/187 (1%)
Query: 8 SRLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGV 67
S L GKVA++T +S GIG A A+ L+AEGA+V I++R+ + + L G K+ +
Sbjct: 3 SALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAG-AKVHVL 61
Query: 68 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 127
VA ++ + GG+DILV+NA + GPV + W ++ + N+
Sbjct: 62 ELDVADRQGVDAAVASTVEALGGLDILVNNAGIM-LLGPVEDADTTDWTRMIDTNLLGLM 120
Query: 128 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 187
+T+ LP++ R+ + Y +K + ++ + Q++ +R
Sbjct: 121 YMTRAALPHLL-RSKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVR 179
Query: 188 VNCLAPG 194
V + PG
Sbjct: 180 VVVIEPG 186
Score = 37.4 bits (85), Expect = 0.028, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 684 AMLSTDKLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRK 743
A+ ST + GG+DILV+NA + P+ + W ++ D NL +T+ LP++ +
Sbjct: 74 AVASTVEALGGLDILVNNAGIMLLG-PVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLR 132
Query: 744 KK 745
K
Sbjct: 133 SK 134
>pdb|1Y5M|A Chain A, The Crystal Structure Of Murine 11b-Hydroxysteroid
Dehydrogenase: An Important Therapeutic Target For
Diabetes
pdb|1Y5M|B Chain B, The Crystal Structure Of Murine 11b-Hydroxysteroid
Dehydrogenase: An Important Therapeutic Target For
Diabetes
pdb|1Y5R|A Chain A, The Crystal Structure Of Murine 11b-hydroxysteroid
Dehydrogenase Complexed With Corticosterone
pdb|1Y5R|B Chain B, The Crystal Structure Of Murine 11b-hydroxysteroid
Dehydrogenase Complexed With Corticosterone
Length = 276
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 83/194 (42%), Gaps = 4/194 (2%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L GK +VT +S GIG +A LS GA VV+++R E + K V + G +
Sbjct: 16 LQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASAHYIAG 75
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
+ ++ A K GG+D+L+ N + + +V ++ EVN S ++
Sbjct: 76 TMEDMTFAEQFIVKAGKLMGGLDMLILNHITQTSLSLFHDDIHSVR-RVMEVNFLSYVVM 134
Query: 499 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDL--ASENIR 556
+ LP +++ N + ++ YS SK AL G + +L N+
Sbjct: 135 STAALPMLKQSNGSIAVISSLAGKMTQ-PMIAPYSASKFALDGFFSTIRTELYITKVNVS 193
Query: 557 VNCLAPGITKTKFA 570
+ G+ T+ A
Sbjct: 194 ITLCVLGLIDTETA 207
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 2/180 (1%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L GK +VT +S GIG +A LS GA VV+++R E + K V + G +
Sbjct: 16 LQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASAHYIAG 75
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
+ ++ A K GG+D+L+ N + + +V ++ EVN S ++
Sbjct: 76 TMEDMTFAEQFIVKAGKLMGGLDMLILNHITQTSLSLFHDDIHSVR-RVMEVNFLSYVVM 134
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
+ LP +++ N + ++ YS SK AL G + +L + V+
Sbjct: 135 STAALPMLKQSNGSIAVISSLAGKMTQ-PMIAPYSASKFALDGFFSTIRTELYITKVNVS 193
>pdb|4GKB|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans,
Unliganded Structure
pdb|4GKB|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans,
Unliganded Structure
pdb|4GKB|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans,
Unliganded Structure
pdb|4GKB|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans,
Unliganded Structure
pdb|4GLO|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nad
pdb|4GLO|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nad
pdb|4GLO|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nad
pdb|4GLO|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nad
pdb|4GVX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nadp And L-Fucose
pdb|4GVX|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nadp And L-Fucose
pdb|4GVX|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nadp And L-Fucose
pdb|4GVX|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nadp And L-Fucose
Length = 258
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 107/253 (42%), Gaps = 16/253 (6%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L KV +VT + GIG AI+ RL+ E A V+ +R + L ++
Sbjct: 5 LQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPD----GAFLDALAQRQPRATYL 60
Query: 439 HVAKKEDRQKLFEHAEK--KFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 496
V ++D Q A+ FG +D LV+NA VN G ++ + + E N+ +
Sbjct: 61 PVELQDDAQCRDAVAQTIATFGRLDGLVNNAGVNDGIG--LDAGRDAFVASLERNLIHYY 118
Query: 497 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 556
+ +P+++ G Y SK A L LT+ A L +R
Sbjct: 119 AMAHYCVPHLKATRGAIVNISSKTAVTGQGNTSG-YCASKGAQLALTREWAVALREHGVR 177
Query: 557 VNCLAPGITKTKFA---AALYETEEAH--EIAVSNVPMG-RLAVPDEMGGIVAFLCSDDA 610
VN + P T A +E EA EIA + VP+G R PDE+ FL S A
Sbjct: 178 VNAVIPAEVMTPLYRNWIATFEDPEAKLAEIA-AKVPLGRRFTTPDEIADTAVFLLSPRA 236
Query: 611 SYITGEVIVAAGG 623
S+ TGE + GG
Sbjct: 237 SHTTGEWLFVDGG 249
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 76/186 (40%), Gaps = 9/186 (4%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L KV +VT + GIG AI+ RL+ E A V+ +R + L ++
Sbjct: 5 LQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPD----GAFLDALAQRQPRATYL 60
Query: 70 HVAKKEDRQKLFEHAEK--KFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 127
V ++D Q A+ FG +D LV+NA VN G ++ + + E N+ +
Sbjct: 61 PVELQDDAQCRDAVAQTIATFGRLDGLVNNAGVNDGIG--LDAGRDAFVASLERNLIHYY 118
Query: 128 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 187
+ +P+++ G Y SK A L LT+ A L +R
Sbjct: 119 AMAHYCVPHLKATRGAIVNISSKTAVTGQGNTSG-YCASKGAQLALTREWAVALREHGVR 177
Query: 188 VNCLAP 193
VN + P
Sbjct: 178 VNAVIP 183
>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid
Dehydrogenase Type Xi
pdb|1YB1|B Chain B, Crystal Structure Of Human 17-Beta-Hydroxysteroid
Dehydrogenase Type Xi
Length = 272
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 81/194 (41%), Gaps = 5/194 (2%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
+ G++ ++T + GIG A + + +V+ + + + + G K+ V
Sbjct: 29 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG-AKVHTFVV 87
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
+ +ED + + + G + ILV+NA V T + + +K FEVNV + F
Sbjct: 88 DCSNREDIYSSAKKVKAEIGDVSILVNNAGV-VYTSDLFATQDPQIEKTFEVNVLAHFWT 146
Query: 499 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI--- 555
T+ LP + K N L AY SK A +G K + +LA+ I
Sbjct: 147 TKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGV 206
Query: 556 RVNCLAPGITKTKF 569
+ CL P T F
Sbjct: 207 KTTCLCPNFVNTGF 220
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 80/187 (42%), Gaps = 5/187 (2%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
+TG++ ++T + GIG A + + +V+ + + + + G K+ V
Sbjct: 29 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG-AKVHTFVV 87
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
+ +ED + + + G + ILV+NA V T + + +K FEVNV + F
Sbjct: 88 DCSNREDIYSSAKKVKAEIGDVSILVNNAGV-VYTSDLFATQDPQIEKTFEVNVLAHFWT 146
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENI--- 186
T+ LP + K N L AY SK A +G K + +LA+ I
Sbjct: 147 TKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGV 206
Query: 187 RVNCLAP 193
+ CL P
Sbjct: 207 KTTCLCP 213
>pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa
pdb|2NWQ|B Chain B, Short Chain Dehydrogenase From Pseudomonas Aeruginosa
pdb|2NWQ|C Chain C, Short Chain Dehydrogenase From Pseudomonas Aeruginosa
pdb|2NWQ|D Chain D, Short Chain Dehydrogenase From Pseudomonas Aeruginosa
Length = 272
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 84/202 (41%), Gaps = 17/202 (8%)
Query: 386 VTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAKKED 445
+T ++ G G A A+R + G S+V++ R+E + L + ++ + V +
Sbjct: 26 ITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK--TRVLPLTLDVRDRAA 83
Query: 446 RQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQEVLPY 505
++ ++F + L++NA + T P C + WD + N+K T+ +LP
Sbjct: 84 XSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTXVDTNIKGLLYSTRLLLPR 143
Query: 506 IRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQ--------DLASENIRV 557
+ + G + + + G TKA + DL +RV
Sbjct: 144 LIAHGAGASIVNLG-------SVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRV 196
Query: 558 NCLAPGITKTKFAAALYETEEA 579
L PG+ +++F+ + ++A
Sbjct: 197 TNLEPGLCESEFSLVRFGGDQA 218
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 75/187 (40%), Gaps = 17/187 (9%)
Query: 17 VTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAKKED 76
+T ++ G G A A+R + G S+V++ R+E + L + ++ + V +
Sbjct: 26 ITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK--TRVLPLTLDVRDRAA 83
Query: 77 RQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQEVLPY 136
++ ++F + L++NA + T P C + WD + N+K T+ +LP
Sbjct: 84 XSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTXVDTNIKGLLYSTRLLLPR 143
Query: 137 IRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQ--------DLASENIRV 188
+ + G + + + G TKA + DL +RV
Sbjct: 144 LIAHGAGASIVNLG-------SVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRV 196
Query: 189 NCLAPGI 195
L PG+
Sbjct: 197 TNLEPGL 203
>pdb|1CWU|A Chain A, Brassica Napus Enoyl Acp Reductase A138g Mutant Complexed
With Nad+ And Thienodiazaborine
pdb|1CWU|B Chain B, Brassica Napus Enoyl Acp Reductase A138g Mutant Complexed
With Nad+ And Thienodiazaborine
Length = 296
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 77/182 (42%), Gaps = 3/182 (1%)
Query: 447 QKLFEHAEKKFGGIDILVSNAAVNP-ATGPVVECPENVWDKIFEVNVKSTFLLTQEVLPY 505
Q+ E + FG IDILV + P + P++E + + S L LP
Sbjct: 106 QEAAECVRQDFGSIDILVHSLGNGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPI 165
Query: 506 IRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLA-SENIRVNCLAPGI 564
+ + P G S +K AL T+ +A + +NIRVN ++ G
Sbjct: 166 MNPGGASISLTYIASERIIP-GYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGP 224
Query: 565 TKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVIVAAGGM 624
++ A A+ + E + +N P+ + DE+G AFL S AS ITG I G+
Sbjct: 225 LGSRAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGL 284
Query: 625 QS 626
S
Sbjct: 285 NS 286
>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver
Somniferum
Length = 311
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 382 KVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 441
+ AVVT + GIGF I K+LS+ G VV++ R + ++AVE L+ H+ VV H
Sbjct: 13 RCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHEN---VVFHQL 69
Query: 442 KKED----RQKLFEHAEKKFGGIDILVSNAAV 469
D L + + FG +DILV+NA V
Sbjct: 70 DVTDPIATMSSLADFIKTHFGKLDILVNNAGV 101
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 13 KVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 72
+ AVVT + GIGF I K+LS+ G VV++ R + ++AVE L+ H+ VV H
Sbjct: 13 RCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHEN---VVFHQL 69
Query: 73 KKED----RQKLFEHAEKKFGGIDILVSNAAV 100
D L + + FG +DILV+NA V
Sbjct: 70 DVTDPIATMSSLADFIKTHFGKLDILVNNAGV 101
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 637 FIGAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRTKF 678
F AY+ SK L T+V+A + +VNC+ PGL++T+
Sbjct: 232 FGAAYTTSKACLNAYTRVLANKIP--KFQVNCVCPGLVKTEM 271
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 11/85 (12%)
Query: 531 AYSVSKTALLGLTKAVAQDLASENIRVNCLAPGITKTK--FAAALYETEEAHEIAVSNVP 588
AY+ SK L T+ +A + +VNC+ PG+ KT+ + Y EE E V
Sbjct: 235 AYTTSKACLNAYTRVLANKIPK--FQVNCVCPGLVKTEMNYGIGNYTAEEGAEHVV---- 288
Query: 589 MGRLAV-PDEMGGIVAFLCSDDASY 612
R+A+ PD+ + CS+ +++
Sbjct: 289 --RIALFPDDGPSGFFYDCSELSAF 311
>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia
Coli
pdb|3ASU|B Chain B, Crystal Structure Of Serine Dehydrogenase From Escherichia
Coli
pdb|3ASV|A Chain A, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|B Chain B, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|C Chain C, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|D Chain D, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|E Chain E, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|F Chain F, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
Length = 248
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 85/198 (42%), Gaps = 5/198 (2%)
Query: 383 VAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAK 442
+ +VT ++ G G I +R +G V+ + R++ + ++ L+ E + V
Sbjct: 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQ----ERLQELKDELGDNLYIAQLDVRN 57
Query: 443 KEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQEV 502
+ +++ ++ IDILV+NA + P + W+ + + N K +T+ V
Sbjct: 58 RAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAV 117
Query: 503 LPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCLAP 562
LP + +RN P+ Y +K + + + DL +RV + P
Sbjct: 118 LPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEP 177
Query: 563 GIT-KTKFAAALYETEEA 579
G+ T+F+ ++ ++
Sbjct: 178 GLVGGTEFSNVRFKGDDG 195
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 77/182 (42%), Gaps = 4/182 (2%)
Query: 14 VAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAK 73
+ +VT ++ G G I +R +G V+ + R++ + ++ L+ E + V
Sbjct: 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQ----ERLQELKDELGDNLYIAQLDVRN 57
Query: 74 KEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQEV 133
+ +++ ++ IDILV+NA + P + W+ + + N K +T+ V
Sbjct: 58 RAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAV 117
Query: 134 LPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCLAP 193
LP + +RN P+ Y +K + + + DL +RV + P
Sbjct: 118 LPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEP 177
Query: 194 GI 195
G+
Sbjct: 178 GL 179
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 680 DRMIAMLSTDKLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLP 739
+ M+A L + + IDILV+NA + EP + S W+ + D N K +T+ VLP
Sbjct: 62 EEMLASLPAE--WCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLP 119
Query: 740 YMRKKK 745
M ++
Sbjct: 120 GMVERN 125
>pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid
Dehydeogenase (Cad) From Streptomyces Clavuligerus
pdb|2JAH|B Chain B, Biochemical And Structural Analysis Of The Clavulanic Acid
Dehydeogenase (Cad) From Streptomyces Clavuligerus
pdb|2JAH|C Chain C, Biochemical And Structural Analysis Of The Clavulanic Acid
Dehydeogenase (Cad) From Streptomyces Clavuligerus
pdb|2JAH|D Chain D, Biochemical And Structural Analysis Of The Clavulanic Acid
Dehydeogenase (Cad) From Streptomyces Clavuligerus
Length = 247
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 5/213 (2%)
Query: 377 SRLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGV 436
S L GKVA++T +S GIG A A+ L+ EGA+V I++R+ + + L G K+ +
Sbjct: 3 SALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAG-AKVHVL 61
Query: 437 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 496
VA ++ + GG+DILV+NA + GPV + W + + N+
Sbjct: 62 ELDVADRQGVDAAVASTVEALGGLDILVNNAGIX-LLGPVEDADTTDWTRXIDTNLLGLX 120
Query: 497 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 556
T+ LP++ R+ + Y +K + ++ + Q++ +R
Sbjct: 121 YXTRAALPHLL-RSKGTVVQXSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVR 179
Query: 557 VNCLAPGITKTKFAAALYE--TEEAHEIAVSNV 587
V + PG T T+ + T+E +E +S +
Sbjct: 180 VVVIEPGTTDTELRGHITHTATKEXYEQRISQI 212
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 3/187 (1%)
Query: 8 SRLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGV 67
S L GKVA++T +S GIG A A+ L+AEGA+V I++R+ + + L G K+ +
Sbjct: 3 SALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAG-AKVHVL 61
Query: 68 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 127
VA ++ + GG+DILV+NA + GPV + W + + N+
Sbjct: 62 ELDVADRQGVDAAVASTVEALGGLDILVNNAGIX-LLGPVEDADTTDWTRXIDTNLLGLX 120
Query: 128 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIR 187
T+ LP++ R+ + Y +K + ++ + Q++ +R
Sbjct: 121 YXTRAALPHLL-RSKGTVVQXSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVR 179
Query: 188 VNCLAPG 194
V + PG
Sbjct: 180 VVVIEPG 186
Score = 34.7 bits (78), Expect = 0.18, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 684 AMLSTDKLYGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVLPYMRK 743
A+ ST + GG+DILV+NA + P+ + W + D NL T+ LP++ +
Sbjct: 74 AVASTVEALGGLDILVNNAGIXLLG-PVEDADTTDWTRXIDTNLLGLXYXTRAALPHLLR 132
Query: 744 KK 745
K
Sbjct: 133 SK 134
>pdb|2PD3|A Chain A, Crystal Structure Of The Helicobacter Pylori Enoyl-Acyl
Carrier Protein Reductase In Complex With
Hydroxydiphenyl Ether Compounds, Triclosan And Diclosan
pdb|2PD3|B Chain B, Crystal Structure Of The Helicobacter Pylori Enoyl-Acyl
Carrier Protein Reductase In Complex With
Hydroxydiphenyl Ether Compounds, Triclosan And Diclosan
pdb|2PD3|C Chain C, Crystal Structure Of The Helicobacter Pylori Enoyl-Acyl
Carrier Protein Reductase In Complex With
Hydroxydiphenyl Ether Compounds, Triclosan And Diclosan
pdb|2PD3|D Chain D, Crystal Structure Of The Helicobacter Pylori Enoyl-Acyl
Carrier Protein Reductase In Complex With
Hydroxydiphenyl Ether Compounds, Triclosan And Diclosan
pdb|2PD4|A Chain A, Crystal Structure Of The Helicobacter Pylori Enoyl-Acyl
Carrier Protein Reductase In Complex With
Hydroxydiphenyl Ether Compounds, Triclosan And Diclosan
pdb|2PD4|B Chain B, Crystal Structure Of The Helicobacter Pylori Enoyl-Acyl
Carrier Protein Reductase In Complex With
Hydroxydiphenyl Ether Compounds, Triclosan And Diclosan
pdb|2PD4|C Chain C, Crystal Structure Of The Helicobacter Pylori Enoyl-Acyl
Carrier Protein Reductase In Complex With
Hydroxydiphenyl Ether Compounds, Triclosan And Diclosan
pdb|2PD4|D Chain D, Crystal Structure Of The Helicobacter Pylori Enoyl-Acyl
Carrier Protein Reductase In Complex With
Hydroxydiphenyl Ether Compounds, Triclosan And Diclosan
Length = 275
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 124/269 (46%), Gaps = 19/269 (7%)
Query: 379 LAGKVAVVT--ASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGV 436
L GK ++ A++ I + IA+ +GA++ + ES + K V + +E +
Sbjct: 4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYV-Y 61
Query: 437 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPAT---GPVVECPENVWDKIFEVNVK 493
V+K+E + L+ +K G +D +V + A P G ++E ++ ++ E++V
Sbjct: 62 ELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVY 121
Query: 494 STFLLTQEVLPYIRK-RNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLAS 552
S LT + P + + +A + ++G ++K AL + +A DL
Sbjct: 122 SLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMG---LAKAALESAVRYLAVDLGK 178
Query: 553 ENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASY 612
+IRVN L+ G +T ++ + + + N P+ + +E+G +L S +S
Sbjct: 179 HHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSG 238
Query: 613 ITGEV--------IVAAGGMQSRLTKSTV 633
++GEV ++ G ++ + K+T+
Sbjct: 239 VSGEVHFVDAGYHVMGMGAVEEKDNKATL 267
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 629 TKSTVEFRFIGAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
TK + +G ++K AL + +A DL +IRVN L+ G IRT
Sbjct: 149 TKYMAHYNVMG---LAKAALESAVRYLAVDLGKHHIRVNALSAGPIRT 193
>pdb|3K2E|A Chain A, Crystal Structure Of Enoyl-(Acyl-Carrier-Protein)
Reductase From Anaplasma Phagocytophilum At 1.9a
Resolution
pdb|3K2E|B Chain B, Crystal Structure Of Enoyl-(Acyl-Carrier-Protein)
Reductase From Anaplasma Phagocytophilum At 1.9a
Resolution
pdb|3K31|A Chain A, Crystal Structure Of Eonyl-(Acyl-Carrier-Protein)
Reductase From Anaplasma Phagocytophilum In Complex With
Nad At 1.9a Resolution
pdb|3K31|B Chain B, Crystal Structure Of Eonyl-(Acyl-Carrier-Protein)
Reductase From Anaplasma Phagocytophilum In Complex With
Nad At 1.9a Resolution
Length = 296
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 104/246 (42%), Gaps = 11/246 (4%)
Query: 379 LAGKVAVV--TASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGV 436
+ GK V+ A+ + + IAK + +GA V ++ E+ K V+ L + K++ V
Sbjct: 28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSET-FKKRVDPLAESLGVKLT-V 85
Query: 437 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAV---NPATGPVVECPENVWDKIFEVNVK 493
C V+ E +F+ +++G +D +V A N G V+ + ++
Sbjct: 86 PCDVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCY 145
Query: 494 STFLLTQEVLPYIRKRNXXXXXXXXXXXXLAP-FKLLGAYSVSKTALLGLTKAVAQDLAS 552
S + + P + + P + ++G V K AL K +A DL
Sbjct: 146 SFTYIASKAEPLMTNGGSILTLSYYGAEKVVPHYNVMG---VCKAALEASVKYLAVDLGK 202
Query: 553 ENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASY 612
+ IRVN ++ G +T ++ + + N P+ R D++GG +L SD
Sbjct: 203 QQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLDDVGGAALYLLSDLGRG 262
Query: 613 ITGEVI 618
TGE +
Sbjct: 263 TTGETV 268
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 82/191 (42%), Gaps = 11/191 (5%)
Query: 10 LTGKVAVV--TASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGV 67
+ GK V+ A+ + + IAK + A+GA V ++ E+ K V+ L + K++ V
Sbjct: 28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSET-FKKRVDPLAESLGVKLT-V 85
Query: 68 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAV---NPATGPVVECPENVWDKIFEVNVK 124
C V+ E +F+ +++G +D +V A N G V+ + ++
Sbjct: 86 PCDVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCY 145
Query: 125 STFLLTQEVLPYIRKRNXXXXXXXXXXXXLAP-FKLLGAYSVSKTALLGLTKAVAQDLAS 183
S + + P + + P + ++G V K AL K +A DL
Sbjct: 146 SFTYIASKAEPLMTNGGSILTLSYYGAEKVVPHYNVMG---VCKAALEASVKYLAVDLGK 202
Query: 184 ENIRVNCLAPG 194
+ IRVN ++ G
Sbjct: 203 QQIRVNAISAG 213
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 643 VSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
V K AL K +A DL + IRVN ++ G +RT
Sbjct: 184 VCKAALEASVKYLAVDLGKQQIRVNAISAGPVRT 217
>pdb|4H15|A Chain A, Crystal Structure Of A Short Chain Alcohol
Dehydrogenase-Related Dehydrogenase (Target Id
Nysgrc-011812) From Sinorhizobium Meliloti 1021 In Space
Group P21
pdb|4H15|B Chain B, Crystal Structure Of A Short Chain Alcohol
Dehydrogenase-Related Dehydrogenase (Target Id
Nysgrc-011812) From Sinorhizobium Meliloti 1021 In Space
Group P21
pdb|4H15|C Chain C, Crystal Structure Of A Short Chain Alcohol
Dehydrogenase-Related Dehydrogenase (Target Id
Nysgrc-011812) From Sinorhizobium Meliloti 1021 In Space
Group P21
pdb|4H15|D Chain D, Crystal Structure Of A Short Chain Alcohol
Dehydrogenase-Related Dehydrogenase (Target Id
Nysgrc-011812) From Sinorhizobium Meliloti 1021 In Space
Group P21
pdb|4H16|A Chain A, Crystal Structure Of A Short Chain Alcohol
Dehydrogenase-Related Dehydrogenase (Target Id
Nysgrc-011812) From Sinorhizobium Meliloti 1021 In Space
Group P6422
Length = 261
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 115/259 (44%), Gaps = 25/259 (9%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L GK A++TA + G G A GA V+ ++R + EG + V
Sbjct: 9 LRGKRALITAGTKGAGAATVSLFLELGAQVLTTARA-----------RPEGLPEELFVEA 57
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSN-AAVNPATGPVVECPENVWDKIFEVNVKSTFL 497
+ KE + E ++ GG+D++V + A G ++ W +N+ +
Sbjct: 58 DLTTKEGCAIVAEATRQRLGGVDVIVHXLGGSSAAGGGFSALSDDDWYNELSLNLFAAVR 117
Query: 498 LTQEVLPYIRKRNXXXXXXXXXXXXLAPF-KLLGAYSVSKTALLGLTKAVAQDLASENIR 556
L ++++P R + P + AY+ +K AL +KA +++++ + +R
Sbjct: 118 LDRQLVPDXVARGSGVVVHVTSIQRVLPLPESTTAYAAAKAALSTYSKAXSKEVSPKGVR 177
Query: 557 VNCLAPGITKTKFAAALYE---------TEEAHEI---AVSNVPMGRLAVPDEMGGIVAF 604
V ++PG +T+ + L E E +I + +P+GR A P+E+ ++AF
Sbjct: 178 VVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIXDGLGGIPLGRPAKPEEVANLIAF 237
Query: 605 LCSDDASYITGEVIVAAGG 623
L SD A+ ITG GG
Sbjct: 238 LASDRAASITGAEYTIDGG 256
>pdb|1P33|A Chain A, Pteridine Reductase From Leishmania Tarentolae Complex
With Nadph And Mtx
pdb|1P33|B Chain B, Pteridine Reductase From Leishmania Tarentolae Complex
With Nadph And Mtx
pdb|1P33|C Chain C, Pteridine Reductase From Leishmania Tarentolae Complex
With Nadph And Mtx
pdb|1P33|D Chain D, Pteridine Reductase From Leishmania Tarentolae Complex
With Nadph And Mtx
Length = 289
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 116/280 (41%), Gaps = 44/280 (15%)
Query: 383 VAVVTASSDGIGFAIAKRLSTEGASVVIS-SRKESNVNKAVETLQKEG-------HQKIS 434
VA+VT ++ +G +IA+ L EG +V + R ++ + TL +S
Sbjct: 9 VALVTGAAKRLGSSIAEALHAEGYTVCLHYHRSAADASTLAATLNARRPNSAITVQADLS 68
Query: 435 GVVCHVAKKEDRQ----------KLFEHAEKKFGGIDILVSNAAVNPATGPVV-----EC 479
V + D L + +G D+LV+NA+ T P++ E
Sbjct: 69 NVATASFSETDGSVPVTLFSRCSALVDACYMHWGRCDVLVNNASSFYPT-PLLRKDAGEG 127
Query: 480 PENVWDK---------IFEVNVKSTFLL----TQEVLPYIRKRNXXXXXXXXXXXXLAPF 526
+V DK +F N + + L Q V ++ +
Sbjct: 128 GSSVGDKESLEVAAADLFGSNAIAPYFLIKAFAQRVADTRAEQRGTSYSIVNMVDAMTSQ 187
Query: 527 KLLG--AYSVSKTALLGLTKAVAQDLASENIRVNCLAPGITKTKFAAALYETEEAHEIAV 584
LLG Y+++K AL GLT++ A +LAS IRVN ++PG++ E+
Sbjct: 188 PLLGYTMYTMAKEALEGLTRSAALELASLQIRVNGVSPGLSVLPDDMPFSVQEDYRR--- 244
Query: 585 SNVPM-GRLAVPDEMGGIVAFLCSDDASYITGEVIVAAGG 623
VP+ R + +E+ +V FLCS A YITG I GG
Sbjct: 245 -KVPLYQRNSSAEEVSDVVIFLCSPKAKYITGTCIKVDGG 283
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 93/223 (41%), Gaps = 39/223 (17%)
Query: 11 TGKVAVVTASSDGIGFAIAKRLSAEGASVVIS-SRKESNVNKAVETLQKEG-------HQ 62
T VA+VT ++ +G +IA+ L AEG +V + R ++ + TL
Sbjct: 6 TAPVALVTGAAKRLGSSIAEALHAEGYTVCLHYHRSAADASTLAATLNARRPNSAITVQA 65
Query: 63 KISGVVCHVAKKEDRQ----------KLFEHAEKKFGGIDILVSNAAVNPATGPVV---- 108
+S V + D L + +G D+LV+NA+ T P++
Sbjct: 66 DLSNVATASFSETDGSVPVTLFSRCSALVDACYMHWGRCDVLVNNASSFYPT-PLLRKDA 124
Query: 109 -ECPENVWDK---------IFEVNVKSTFLL----TQEVLPYIRKRNXXXXXXXXXXXXL 154
E +V DK +F N + + L Q V ++ +
Sbjct: 125 GEGGSSVGDKESLEVAAADLFGSNAIAPYFLIKAFAQRVADTRAEQRGTSYSIVNMVDAM 184
Query: 155 APFKLLG--AYSVSKTALLGLTKAVAQDLASENIRVNCLAPGI 195
LLG Y+++K AL GLT++ A +LAS IRVN ++PG+
Sbjct: 185 TSQPLLGYTMYTMAKEALEGLTRSAALELASLQIRVNGVSPGL 227
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGL 673
Y+++K AL GLT+ A +LA IRVN ++PGL
Sbjct: 195 YTMAKEALEGLTRSAALELASLQIRVNGVSPGL 227
>pdb|2QIO|A Chain A, X-Ray Structure Of Enoyl-Acyl Carrier Protein Reductase
From Bacillus Anthracis With Triclosan
pdb|2QIO|B Chain B, X-Ray Structure Of Enoyl-Acyl Carrier Protein Reductase
From Bacillus Anthracis With Triclosan
pdb|2QIO|C Chain C, X-Ray Structure Of Enoyl-Acyl Carrier Protein Reductase
From Bacillus Anthracis With Triclosan
pdb|2QIO|D Chain D, X-Ray Structure Of Enoyl-Acyl Carrier Protein Reductase
From Bacillus Anthracis With Triclosan
pdb|3OJE|A Chain A, Crystal Structure Of The Bacillus Cereus Enoyl-Acyl
Carrier Protein Reductase (Apo Form)
Length = 256
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 110/258 (42%), Gaps = 33/258 (12%)
Query: 379 LAGKVAVV--TASSDGIGFAIAKRLSTEGASVVIS---SRKESNVNKAVETLQKEGHQKI 433
L GK VV A+ I + IA+ L GA ++ + R E NV + +TL EG + +
Sbjct: 4 LQGKTFVVMGVANQRSIAWGIARSLHNAGAKLIFTYAGERLERNVRELADTL--EGQESL 61
Query: 434 SGVVCHVAKKEDRQKLFEHAEKKFG---GIDILVSNAAVNPATGPVVECPENVWDKIFEV 490
+ C V E+ FE +++ G G+ ++ A + G V+ + + +
Sbjct: 62 V-LPCDVTNDEELTACFETIKQEVGTIHGVAHCIAFANRDDLKGEFVDTSRDGF--LLAQ 118
Query: 491 NVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSV---SKTALLGLTKAVA 547
N+ S F LT + K+ L +++ Y+V +K +L K +A
Sbjct: 119 NI-SAFSLT--AVAREAKKVMTEGGNILTLTYLGGERVVKNYNVMGVAKASLEASVKYLA 175
Query: 548 QDLASENIRVNCLAPGITKT-------KFAAALYETEEAHEIAVSNVPMGRLAVPDEMGG 600
DL IRVN ++ G +T F + L E EE P+ R +E+G
Sbjct: 176 NDLGQHGIRVNAISAGPIRTLSAKGVGDFNSILREIEE-------RAPLRRTTTQEEVGD 228
Query: 601 IVAFLCSDDASYITGEVI 618
FL SD A +TGE I
Sbjct: 229 TAVFLFSDLARGVTGENI 246
Score = 30.0 bits (66), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 643 VSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
V+K +L K +A DL IRVN ++ G IRT
Sbjct: 162 VAKASLEASVKYLANDLGQHGIRVNAISAGPIRT 195
>pdb|1N5D|A Chain A, Crystal Structure Of Porcine Testicular Carbonyl Reductase
20beta-Hydroxysteroid Dehydrogenase
Length = 288
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 74/141 (52%), Gaps = 31/141 (21%)
Query: 382 KVAVVTASSDGIGFAIAKRLSTEGA-SVVISSRKESNVNKAVETLQKEG-----HQKISG 435
+VA+VT ++ GIGFAI + L + A VV+++R + AV+ LQ EG HQ
Sbjct: 5 RVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFHQ---- 60
Query: 436 VVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAV-----NPATGPVVECPENVWDKIFEV 490
+ + + L + K++GG+D+LV+NAA+ NP P ++ E+
Sbjct: 61 --LDIIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPT-------PFHIQ---AEL 108
Query: 491 NVKSTFLLTQ----EVLPYIR 507
+K+ F+ T+ E+LP I+
Sbjct: 109 TMKTNFMGTRNVCTELLPLIK 129
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 74/141 (52%), Gaps = 31/141 (21%)
Query: 13 KVAVVTASSDGIGFAIAKRLSAEGA-SVVISSRKESNVNKAVETLQKEG-----HQKISG 66
+VA+VT ++ GIGFAI + L + A VV+++R + AV+ LQ EG HQ
Sbjct: 5 RVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFHQ---- 60
Query: 67 VVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAV-----NPATGPVVECPENVWDKIFEV 121
+ + + L + K++GG+D+LV+NAA+ NP P ++ E+
Sbjct: 61 --LDIIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPT-------PFHIQ---AEL 108
Query: 122 NVKSTFLLTQ----EVLPYIR 138
+K+ F+ T+ E+LP I+
Sbjct: 109 TMKTNFMGTRNVCTELLPLIK 129
>pdb|3OJF|A Chain A, Crystal Structure Of The Bacillus Cereus Enoyl-Acyl
Carrier Protein Reductase With Nadp+ And Indole
Naphthyridinone (Complex Form)
pdb|3OJF|D Chain D, Crystal Structure Of The Bacillus Cereus Enoyl-Acyl
Carrier Protein Reductase With Nadp+ And Indole
Naphthyridinone (Complex Form)
pdb|3OJF|B Chain B, Crystal Structure Of The Bacillus Cereus Enoyl-Acyl
Carrier Protein Reductase With Nadp+ And Indole
Naphthyridinone (Complex Form)
pdb|3OJF|C Chain C, Crystal Structure Of The Bacillus Cereus Enoyl-Acyl
Carrier Protein Reductase With Nadp+ And Indole
Naphthyridinone (Complex Form)
Length = 257
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 110/258 (42%), Gaps = 33/258 (12%)
Query: 379 LAGKVAVV--TASSDGIGFAIAKRLSTEGASVVIS---SRKESNVNKAVETLQKEGHQKI 433
L GK VV A+ I + IA+ L GA ++ + R E NV + +TL EG + +
Sbjct: 4 LQGKTFVVMGVANQRSIAWGIARSLHNAGAKLIFTYAGERLERNVRELADTL--EGQESL 61
Query: 434 SGVVCHVAKKEDRQKLFEHAEKKFG---GIDILVSNAAVNPATGPVVECPENVWDKIFEV 490
+ C V E+ FE +++ G G+ ++ A + G V+ + + +
Sbjct: 62 V-LPCDVTNDEELTACFETIKQEVGTIHGVAHCIAFANRDDLKGEFVDTSRDGF--LLAQ 118
Query: 491 NVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSV---SKTALLGLTKAVA 547
N+ S F LT + K+ L +++ Y+V +K +L K +A
Sbjct: 119 NI-SAFSLT--AVAREAKKVMTEGGNILTLTYLGGERVVKNYNVMGVAKASLEASVKYLA 175
Query: 548 QDLASENIRVNCLAPGITKT-------KFAAALYETEEAHEIAVSNVPMGRLAVPDEMGG 600
DL IRVN ++ G +T F + L E EE P+ R +E+G
Sbjct: 176 NDLGQHGIRVNAISAGPIRTLSAKGVGDFNSILREIEE-------RAPLRRTTTQEEVGD 228
Query: 601 IVAFLCSDDASYITGEVI 618
FL SD A +TGE I
Sbjct: 229 TAVFLFSDLARGVTGENI 246
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 643 VSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
V+K +L K +A DL IRVN ++ G IRT
Sbjct: 162 VAKASLEASVKYLANDLGQHGIRVNAISAGPIRT 195
>pdb|4ALI|A Chain A, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And Triclosan (P1)
pdb|4ALI|B Chain B, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And Triclosan (P1)
pdb|4ALI|C Chain C, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And Triclosan (P1)
pdb|4ALI|D Chain D, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And Triclosan (P1)
pdb|4ALI|E Chain E, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And Triclosan (P1)
pdb|4ALI|F Chain F, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And Triclosan (P1)
pdb|4ALI|G Chain G, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And Triclosan (P1)
pdb|4ALI|H Chain H, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And Triclosan (P1)
pdb|4ALJ|A Chain A, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And 5-Chloro-2-Phenoxyphenol
pdb|4ALJ|B Chain B, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And 5-Chloro-2-Phenoxyphenol
pdb|4ALJ|C Chain C, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And 5-Chloro-2-Phenoxyphenol
pdb|4ALJ|D Chain D, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And 5-Chloro-2-Phenoxyphenol
pdb|4ALJ|E Chain E, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And 5-Chloro-2-Phenoxyphenol
pdb|4ALJ|F Chain F, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And 5-Chloro-2-Phenoxyphenol
pdb|4ALJ|G Chain G, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And 5-Chloro-2-Phenoxyphenol
pdb|4ALJ|H Chain H, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And 5-Chloro-2-Phenoxyphenol
pdb|4ALK|A Chain A, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And 5-Ethyl-2-Phenoxyphenol
pdb|4ALK|B Chain B, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And 5-Ethyl-2-Phenoxyphenol
pdb|4ALK|C Chain C, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And 5-Ethyl-2-Phenoxyphenol
pdb|4ALK|D Chain D, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And 5-Ethyl-2-Phenoxyphenol
pdb|4ALK|E Chain E, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And 5-Ethyl-2-Phenoxyphenol
pdb|4ALK|F Chain F, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And 5-Ethyl-2-Phenoxyphenol
pdb|4ALK|G Chain G, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And 5-Ethyl-2-Phenoxyphenol
pdb|4ALK|H Chain H, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And 5-Ethyl-2-Phenoxyphenol
pdb|4ALM|A Chain A, Crystal Structure Of S. Aureus Fabi (P43212)
pdb|4ALM|B Chain B, Crystal Structure Of S. Aureus Fabi (P43212)
pdb|4ALM|C Chain C, Crystal Structure Of S. Aureus Fabi (P43212)
pdb|4ALM|D Chain D, Crystal Structure Of S. Aureus Fabi (P43212)
pdb|4ALN|A Chain A, Crystal Structure Of S. Aureus Fabi (P32)
pdb|4ALN|B Chain B, Crystal Structure Of S. Aureus Fabi (P32)
pdb|4ALN|C Chain C, Crystal Structure Of S. Aureus Fabi (P32)
pdb|4ALN|D Chain D, Crystal Structure Of S. Aureus Fabi (P32)
pdb|4ALN|E Chain E, Crystal Structure Of S. Aureus Fabi (P32)
pdb|4ALN|F Chain F, Crystal Structure Of S. Aureus Fabi (P32)
pdb|4ALN|G Chain G, Crystal Structure Of S. Aureus Fabi (P32)
pdb|4ALN|H Chain H, Crystal Structure Of S. Aureus Fabi (P32)
pdb|4ALN|I Chain I, Crystal Structure Of S. Aureus Fabi (P32)
pdb|4ALN|J Chain J, Crystal Structure Of S. Aureus Fabi (P32)
pdb|4ALN|K Chain K, Crystal Structure Of S. Aureus Fabi (P32)
pdb|4ALN|L Chain L, Crystal Structure Of S. Aureus Fabi (P32)
Length = 282
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 108/262 (41%), Gaps = 45/262 (17%)
Query: 388 ASSDGIGFAIAKRLSTEGASVVISSRKESN---VNKAVETL-QKEGHQKISGVVCHVAKK 443
A+ I F +AK L GA +V + RKE + + K +E L Q E H + + +
Sbjct: 41 ANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAH------LYQIDVQ 94
Query: 444 EDRQKL--FEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 501
D + + FE K G ID + + A E++ + E + + FLL Q+
Sbjct: 95 SDEEVINGFEQIGKDVGNIDGVYHSIA--------FANMEDLRGRFSETS-REGFLLAQD 145
Query: 502 VLPYIRK--RNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKA--------VAQDLA 551
+ Y + +A L G ++V ++G+ KA +A DL
Sbjct: 146 ISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLG 205
Query: 552 SENIRVNCLAPGITKT-------KFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAF 604
+NIRVN ++ G +T F L E EE P+ R E+G A+
Sbjct: 206 PDNIRVNAISAGPIRTLSAKGVGGFNTILKEIEE-------RAPLKRNVDQVEVGKTAAY 258
Query: 605 LCSDDASYITGEVIVAAGGMQS 626
L SD +S +TGE I G +
Sbjct: 259 LLSDLSSGVTGENIHVDSGFHA 280
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 81/192 (42%), Gaps = 31/192 (16%)
Query: 19 ASSDGIGFAIAKRLSAEGASVVISSRKESN---VNKAVETL-QKEGHQKISGVVCHVAKK 74
A+ I F +AK L GA +V + RKE + + K +E L Q E H + + +
Sbjct: 41 ANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAH------LYQIDVQ 94
Query: 75 EDRQKL--FEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 132
D + + FE K G ID + + A E++ + E + + FLL Q+
Sbjct: 95 SDEEVINGFEQIGKDVGNIDGVYHSIA--------FANMEDLRGRFSETS-REGFLLAQD 145
Query: 133 VLPYIRK--RNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKA--------VAQDLA 182
+ Y + +A L G ++V ++G+ KA +A DL
Sbjct: 146 ISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLG 205
Query: 183 SENIRVNCLAPG 194
+NIRVN ++ G
Sbjct: 206 PDNIRVNAISAG 217
Score = 35.8 bits (81), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 643 VSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
V+K +L K +A DL P+NIRVN ++ G IRT
Sbjct: 188 VAKASLEANVKYLALDLGPDNIRVNAISAGPIRT 221
>pdb|3GNT|A Chain A, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl
Carrier Protein Reductase (Fabi) In Apo Form (Two
Molecules In Au)
pdb|3GNT|B Chain B, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl
Carrier Protein Reductase (Fabi) In Apo Form (Two
Molecules In Au)
Length = 256
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 108/262 (41%), Gaps = 45/262 (17%)
Query: 388 ASSDGIGFAIAKRLSTEGASVVISSRKESN---VNKAVETL-QKEGHQKISGVVCHVAKK 443
A+ I F +AK L GA +V + RKE + + K +E L Q E H + + +
Sbjct: 15 ANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAH------LYQIDVQ 68
Query: 444 EDRQKL--FEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 501
D + + FE K G ID + + A E++ + E + + FLL Q+
Sbjct: 69 SDEEVINGFEQIGKDVGNIDGVYHSIA--------FANMEDLRGRFSETS-REGFLLAQD 119
Query: 502 VLPYIRK--RNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKA--------VAQDLA 551
+ Y + +A L G ++V ++G+ KA +A DL
Sbjct: 120 ISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLG 179
Query: 552 SENIRVNCLAPGITKT-------KFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAF 604
+NIRVN ++ G +T F L E EE P+ R E+G A+
Sbjct: 180 PDNIRVNAISAGPIRTLSAKGVGGFNTILKEIEE-------RAPLKRNVDQVEVGKTAAY 232
Query: 605 LCSDDASYITGEVIVAAGGMQS 626
L SD +S +TGE I G +
Sbjct: 233 LLSDLSSGVTGENIHVDSGFHA 254
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 81/192 (42%), Gaps = 31/192 (16%)
Query: 19 ASSDGIGFAIAKRLSAEGASVVISSRKESN---VNKAVETL-QKEGHQKISGVVCHVAKK 74
A+ I F +AK L GA +V + RKE + + K +E L Q E H + + +
Sbjct: 15 ANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAH------LYQIDVQ 68
Query: 75 EDRQKL--FEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 132
D + + FE K G ID + + A E++ + E + + FLL Q+
Sbjct: 69 SDEEVINGFEQIGKDVGNIDGVYHSIA--------FANMEDLRGRFSETS-REGFLLAQD 119
Query: 133 VLPYIRK--RNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKA--------VAQDLA 182
+ Y + +A L G ++V ++G+ KA +A DL
Sbjct: 120 ISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLG 179
Query: 183 SENIRVNCLAPG 194
+NIRVN ++ G
Sbjct: 180 PDNIRVNAISAG 191
Score = 35.8 bits (81), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 643 VSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
V+K +L K +A DL P+NIRVN ++ G IRT
Sbjct: 162 VAKASLEANVKYLALDLGPDNIRVNAISAGPIRT 195
>pdb|4ALL|A Chain A, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And Triclosan (P212121)
pdb|4ALL|B Chain B, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And Triclosan (P212121)
pdb|4ALL|C Chain C, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And Triclosan (P212121)
pdb|4ALL|D Chain D, Crystal Structure Of S. Aureus Fabi In Complex With Nadp
And Triclosan (P212121)
Length = 277
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 108/262 (41%), Gaps = 45/262 (17%)
Query: 388 ASSDGIGFAIAKRLSTEGASVVISSRKESN---VNKAVETL-QKEGHQKISGVVCHVAKK 443
A+ I F +AK L GA +V + RKE + + K +E L Q E H + + +
Sbjct: 36 ANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAH------LYQIDVQ 89
Query: 444 EDRQKL--FEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 501
D + + FE K G ID + + A E++ + E + + FLL Q+
Sbjct: 90 SDEEVINGFEQIGKDVGNIDGVYHSIA--------FANMEDLRGRFSETS-REGFLLAQD 140
Query: 502 VLPYIRK--RNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKA--------VAQDLA 551
+ Y + +A L G ++V ++G+ KA +A DL
Sbjct: 141 ISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLG 200
Query: 552 SENIRVNCLAPGITKT-------KFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAF 604
+NIRVN ++ G +T F L E EE P+ R E+G A+
Sbjct: 201 PDNIRVNAISAGPIRTLSAKGVGGFNTILKEIEE-------RAPLKRNVDQVEVGKTAAY 253
Query: 605 LCSDDASYITGEVIVAAGGMQS 626
L SD +S +TGE I G +
Sbjct: 254 LLSDLSSGVTGENIHVDSGFHA 275
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 81/192 (42%), Gaps = 31/192 (16%)
Query: 19 ASSDGIGFAIAKRLSAEGASVVISSRKESN---VNKAVETL-QKEGHQKISGVVCHVAKK 74
A+ I F +AK L GA +V + RKE + + K +E L Q E H + + +
Sbjct: 36 ANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAH------LYQIDVQ 89
Query: 75 EDRQKL--FEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 132
D + + FE K G ID + + A E++ + E + + FLL Q+
Sbjct: 90 SDEEVINGFEQIGKDVGNIDGVYHSIA--------FANMEDLRGRFSETS-REGFLLAQD 140
Query: 133 VLPYIRK--RNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKA--------VAQDLA 182
+ Y + +A L G ++V ++G+ KA +A DL
Sbjct: 141 ISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLG 200
Query: 183 SENIRVNCLAPG 194
+NIRVN ++ G
Sbjct: 201 PDNIRVNAISAG 212
Score = 35.8 bits (81), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 643 VSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
V+K +L K +A DL P+NIRVN ++ G IRT
Sbjct: 183 VAKASLEANVKYLALDLGPDNIRVNAISAGPIRT 216
>pdb|3GNS|A Chain A, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl
Carrier Protein Reductase (Fabi) In Apo Form (One
Molecule In Au)
pdb|3GR6|A Chain A, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl
Carrier Protein Reductase (Fabi) In Complex With Nadp
And Triclosan
pdb|3GR6|D Chain D, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl
Carrier Protein Reductase (Fabi) In Complex With Nadp
And Triclosan
pdb|3GR6|G Chain G, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl
Carrier Protein Reductase (Fabi) In Complex With Nadp
And Triclosan
pdb|3GR6|J Chain J, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl
Carrier Protein Reductase (Fabi) In Complex With Nadp
And Triclosan
Length = 260
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 108/262 (41%), Gaps = 45/262 (17%)
Query: 388 ASSDGIGFAIAKRLSTEGASVVISSRKESN---VNKAVETL-QKEGHQKISGVVCHVAKK 443
A+ I F +AK L GA +V + RKE + + K +E L Q E H + + +
Sbjct: 19 ANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAH------LYQIDVQ 72
Query: 444 EDRQKL--FEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 501
D + + FE K G ID + + A E++ + E + + FLL Q+
Sbjct: 73 SDEEVINGFEQIGKDVGNIDGVYHSIA--------FANMEDLRGRFSETS-REGFLLAQD 123
Query: 502 VLPYIRK--RNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKA--------VAQDLA 551
+ Y + +A L G ++V ++G+ KA +A DL
Sbjct: 124 ISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLG 183
Query: 552 SENIRVNCLAPGITKT-------KFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAF 604
+NIRVN ++ G +T F L E EE P+ R E+G A+
Sbjct: 184 PDNIRVNAISAGPIRTLSAKGVGGFNTILKEIEE-------RAPLKRNVDQVEVGKTAAY 236
Query: 605 LCSDDASYITGEVIVAAGGMQS 626
L SD +S +TGE I G +
Sbjct: 237 LLSDLSSGVTGENIHVDSGFHA 258
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 81/192 (42%), Gaps = 31/192 (16%)
Query: 19 ASSDGIGFAIAKRLSAEGASVVISSRKESN---VNKAVETL-QKEGHQKISGVVCHVAKK 74
A+ I F +AK L GA +V + RKE + + K +E L Q E H + + +
Sbjct: 19 ANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAH------LYQIDVQ 72
Query: 75 EDRQKL--FEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 132
D + + FE K G ID + + A E++ + E + + FLL Q+
Sbjct: 73 SDEEVINGFEQIGKDVGNIDGVYHSIA--------FANMEDLRGRFSETS-REGFLLAQD 123
Query: 133 VLPYIRK--RNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKA--------VAQDLA 182
+ Y + +A L G ++V ++G+ KA +A DL
Sbjct: 124 ISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLG 183
Query: 183 SENIRVNCLAPG 194
+NIRVN ++ G
Sbjct: 184 PDNIRVNAISAG 195
Score = 35.8 bits (81), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 643 VSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
V+K +L K +A DL P+NIRVN ++ G IRT
Sbjct: 166 VAKASLEANVKYLALDLGPDNIRVNAISAGPIRT 199
>pdb|1E7W|A Chain A, One Active Site, Two Modes Of Reduction Correlate The
Mechanism Of Leishmania Pteridine Reductase With Pterin
Metabolism And Antifolate Drug Resistance In Trpanosomes
pdb|1E7W|B Chain B, One Active Site, Two Modes Of Reduction Correlate The
Mechanism Of Leishmania Pteridine Reductase With Pterin
Metabolism And Antifolate Drug Resistance In Trpanosomes
Length = 291
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 109/281 (38%), Gaps = 46/281 (16%)
Query: 383 VAVVTASSDGIGFAIAKRLSTEGASVVIS-SRKESNVNKAVETLQKEG-------HQKIS 434
VA+VT ++ +G +IA+ L EG +V + R + N TL +S
Sbjct: 11 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 70
Query: 435 GVVCHVAKKEDRQ----------KLFEHAEKKFGGIDILVSNAAV--------NPATG-- 474
V D +L +G D+LV+NA+ N G
Sbjct: 71 NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHE 130
Query: 475 PVV---ECPENVWDKIFEVNVKSTFLL----TQEVLPYIRKRNXXXXXXXXXXXXLAPFK 527
P V E E +F N + + L V K +
Sbjct: 131 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP 190
Query: 528 LLG--AYSVSKTALLGLTKAVAQDLASENIRVNCLAPGIT--KTKFAAALYETEEAHEIA 583
LLG Y+++K AL GLT++ A +LA IRVN + PG++ A++E
Sbjct: 191 LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVWEGHR----- 245
Query: 584 VSNVPM-GRLAVPDEMGGIVAFLCSDDASYITGEVIVAAGG 623
S VP+ R + E+ +V FLCS A YITG + GG
Sbjct: 246 -SKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGG 285
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGL 673
Y+++K AL GLT+ A +LAP IRVN + PGL
Sbjct: 197 YTMAKGALEGLTRSAALELAPLQIRVNGVGPGL 229
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 83/219 (37%), Gaps = 37/219 (16%)
Query: 14 VAVVTASSDGIGFAIAKRLSAEGASVVIS-SRKESNVNKAVETLQKEG-------HQKIS 65
VA+VT ++ +G +IA+ L AEG +V + R + N TL +S
Sbjct: 11 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 70
Query: 66 GVVCHVAKKEDRQ----------KLFEHAEKKFGGIDILVSNAAV--------NPATG-- 105
V D +L +G D+LV+NA+ N G
Sbjct: 71 NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHE 130
Query: 106 PVV---ECPENVWDKIFEVNVKSTFLL----TQEVLPYIRKRNXXXXXXXXXXXXLAPFK 158
P V E E +F N + + L V K +
Sbjct: 131 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP 190
Query: 159 LLG--AYSVSKTALLGLTKAVAQDLASENIRVNCLAPGI 195
LLG Y+++K AL GLT++ A +LA IRVN + PG+
Sbjct: 191 LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL 229
>pdb|1W0C|A Chain A, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1)
By 2,4,6-Triaminoquinazoline; Structure Of The Nadp
Ternary Complex.
pdb|1W0C|B Chain B, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1)
By 2,4,6-Triaminoquinazoline; Structure Of The Nadp
Ternary Complex.
pdb|1W0C|C Chain C, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1)
By 2,4,6-Triaminoquinazoline; Structure Of The Nadp
Ternary Complex.
pdb|1W0C|D Chain D, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1)
By 2,4,6-Triaminoquinazoline; Structure Of The Nadp
Ternary Complex.
pdb|1W0C|E Chain E, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1)
By 2,4,6-Triaminoquinazoline; Structure Of The Nadp
Ternary Complex.
pdb|1W0C|F Chain F, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1)
By 2,4,6-Triaminoquinazoline; Structure Of The Nadp
Ternary Complex.
pdb|1W0C|G Chain G, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1)
By 2,4,6-Triaminoquinazoline; Structure Of The Nadp
Ternary Complex.
pdb|1W0C|H Chain H, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1)
By 2,4,6-Triaminoquinazoline; Structure Of The Nadp
Ternary Complex
Length = 307
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 109/281 (38%), Gaps = 46/281 (16%)
Query: 383 VAVVTASSDGIGFAIAKRLSTEGASVVIS-SRKESNVNKAVETLQKEG-------HQKIS 434
VA+VT ++ +G +IA+ L EG +V + R + N TL +S
Sbjct: 27 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 86
Query: 435 GVVCHVAKKEDRQ----------KLFEHAEKKFGGIDILVSNAAV--------NPATG-- 474
V D +L +G D+LV+NA+ N G
Sbjct: 87 NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHE 146
Query: 475 PVV---ECPENVWDKIFEVNVKSTFLL----TQEVLPYIRKRNXXXXXXXXXXXXLAPFK 527
P V E E +F N + + L V K +
Sbjct: 147 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP 206
Query: 528 LLG--AYSVSKTALLGLTKAVAQDLASENIRVNCLAPGIT--KTKFAAALYETEEAHEIA 583
LLG Y+++K AL GLT++ A +LA IRVN + PG++ A++E
Sbjct: 207 LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVWEGHR----- 261
Query: 584 VSNVPM-GRLAVPDEMGGIVAFLCSDDASYITGEVIVAAGG 623
S VP+ R + E+ +V FLCS A YITG + GG
Sbjct: 262 -SKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGG 301
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGL 673
Y+++K AL GLT+ A +LAP IRVN + PGL
Sbjct: 213 YTMAKGALEGLTRSAALELAPLQIRVNGVGPGL 245
Score = 36.6 bits (83), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 87/230 (37%), Gaps = 37/230 (16%)
Query: 3 TAVNASRLTGKVAVVTASSDGIGFAIAKRLSAEGASVVIS-SRKESNVNKAVETLQKEG- 60
TA + T VA+VT ++ +G +IA+ L AEG +V + R + N TL
Sbjct: 16 TASEMTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP 75
Query: 61 ------HQKISGVVCHVAKKEDRQ----------KLFEHAEKKFGGIDILVSNAAV---- 100
+S V D +L +G D+LV+NA+
Sbjct: 76 NSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPT 135
Query: 101 ----NPATG--PVV---ECPENVWDKIFEVNVKSTFLL----TQEVLPYIRKRNXXXXXX 147
N G P V E E +F N + + L V K
Sbjct: 136 PLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSI 195
Query: 148 XXXXXXLAPFKLLG--AYSVSKTALLGLTKAVAQDLASENIRVNCLAPGI 195
+ LLG Y+++K AL GLT++ A +LA IRVN + PG+
Sbjct: 196 INMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL 245
>pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE
SDR FROM Xanthobacter Autotrophicus Py2
Length = 272
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 12/178 (6%)
Query: 377 SRLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGV 436
S+ K+A+VT + G+G A+A L+ G V ++ R+ ++ LQ+ +
Sbjct: 24 SKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRR-------LDALQETAAEIGDDA 76
Query: 437 VC---HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVK 493
+C V + + LF +KFG +D+L +NA P + W ++ + N+
Sbjct: 77 LCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPXEDLTFAQWKQVVDTNLT 136
Query: 494 STFLLTQEVLPYIRKR--NXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQD 549
FL TQE + + +P Y+ +K A+ GLTK+ + D
Sbjct: 137 GPFLCTQEAFRVXKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLD 194
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 12/178 (6%)
Query: 8 SRLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGV 67
S+ K+A+VT + G+G A+A L+ G V ++ R+ ++ LQ+ +
Sbjct: 24 SKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRR-------LDALQETAAEIGDDA 76
Query: 68 VC---HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVK 124
+C V + + LF +KFG +D+L +NA P + W ++ + N+
Sbjct: 77 LCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPXEDLTFAQWKQVVDTNLT 136
Query: 125 STFLLTQEVLPYIRKR--NXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQD 180
FL TQE + + +P Y+ +K A+ GLTK+ + D
Sbjct: 137 GPFLCTQEAFRVXKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLD 194
Score = 35.8 bits (81), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 692 YGGIDILVSNAAVNPANEPLVECSEVVWDKIFDVNLKSSFLLTQEVL 738
+G +D+L +NA P + + W ++ D NL FL TQE
Sbjct: 100 FGRVDVLFNNAGTGAPAIPXEDLTFAQWKQVVDTNLTGPFLCTQEAF 146
>pdb|2QHX|A Chain A, Structure Of Pteridine Reductase From Leishmania Major
Complexed With A Ligand
pdb|2QHX|B Chain B, Structure Of Pteridine Reductase From Leishmania Major
Complexed With A Ligand
pdb|2QHX|C Chain C, Structure Of Pteridine Reductase From Leishmania Major
Complexed With A Ligand
pdb|2QHX|D Chain D, Structure Of Pteridine Reductase From Leishmania Major
Complexed With A Ligand
Length = 328
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 532 YSVSKTALLGLTKAVAQDLASENIRVNCLAPGIT--KTKFAAALYETEEAHEIAVSNVPM 589
Y+++K AL GLT++ A +LA IRVN + PG++ A++E S VP+
Sbjct: 234 YTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVWEGHR------SKVPL 287
Query: 590 -GRLAVPDEMGGIVAFLCSDDASYITGEVIVAAGG 623
R + E+ +V FLCS A YITG + GG
Sbjct: 288 YQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGG 322
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGL 673
Y+++K AL GLT+ A +LAP IRVN + PGL
Sbjct: 234 YTMAKGALEGLTRSAALELAPLQIRVNGVGPGL 266
Score = 36.2 bits (82), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 83/219 (37%), Gaps = 37/219 (16%)
Query: 14 VAVVTASSDGIGFAIAKRLSAEGASVVIS-SRKESNVNKAVETLQKEG-------HQKIS 65
VA+VT ++ +G +IA+ L AEG +V + R + N TL +S
Sbjct: 48 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 107
Query: 66 GVVCHVAKKEDRQ----------KLFEHAEKKFGGIDILVSNAAV--------NPATG-- 105
V D +L +G D+LV+NA+ N G
Sbjct: 108 NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHE 167
Query: 106 PVV---ECPENVWDKIFEVNVKSTFLL----TQEVLPYIRKRNXXXXXXXXXXXXLAPFK 158
P V E E +F N + + L V K +
Sbjct: 168 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP 227
Query: 159 LLG--AYSVSKTALLGLTKAVAQDLASENIRVNCLAPGI 195
LLG Y+++K AL GLT++ A +LA IRVN + PG+
Sbjct: 228 LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL 266
>pdb|1E92|A Chain A, Pteridine Reductase 1 From Leishmania Major Complexed With
Nadp+ And Dihydrobiopterin
pdb|1E92|B Chain B, Pteridine Reductase 1 From Leishmania Major Complexed With
Nadp+ And Dihydrobiopterin
pdb|1E92|C Chain C, Pteridine Reductase 1 From Leishmania Major Complexed With
Nadp+ And Dihydrobiopterin
pdb|1E92|D Chain D, Pteridine Reductase 1 From Leishmania Major Complexed With
Nadp+ And Dihydrobiopterin
pdb|2BF7|A Chain A, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Biopterin
pdb|2BF7|B Chain B, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Biopterin
pdb|2BF7|C Chain C, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Biopterin
pdb|2BF7|D Chain D, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Biopterin
pdb|2BFA|A Chain A, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Cb3717
pdb|2BFA|B Chain B, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Cb3717
pdb|2BFA|C Chain C, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Cb3717
pdb|2BFA|D Chain D, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Cb3717
pdb|2BFM|A Chain A, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Trimethoprim
pdb|2BFM|B Chain B, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Trimethoprim
pdb|2BFM|C Chain C, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Trimethoprim
pdb|2BFM|D Chain D, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Trimethoprim
pdb|2BFO|A Chain A, Leishmania Major Pteridine Reductase 1 In Complex With
Nadph
pdb|2BFO|B Chain B, Leishmania Major Pteridine Reductase 1 In Complex With
Nadph
pdb|2BFO|C Chain C, Leishmania Major Pteridine Reductase 1 In Complex With
Nadph
pdb|2BFO|D Chain D, Leishmania Major Pteridine Reductase 1 In Complex With
Nadph
pdb|2BFP|A Chain A, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Tetrahydrobiopterin
pdb|2BFP|B Chain B, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Tetrahydrobiopterin
pdb|2BFP|C Chain C, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Tetrahydrobiopterin
pdb|2BFP|D Chain D, Leishmania Major Pteridine Reductase 1 In Complex With
Nadp And Tetrahydrobiopterin
pdb|3H4V|A Chain A, Selective Screening And Design To Identify Inhibitors Of
Leishmania Major Pteridine Reductase 1
pdb|3H4V|B Chain B, Selective Screening And Design To Identify Inhibitors Of
Leishmania Major Pteridine Reductase 1
pdb|3H4V|C Chain C, Selective Screening And Design To Identify Inhibitors Of
Leishmania Major Pteridine Reductase 1
pdb|3H4V|D Chain D, Selective Screening And Design To Identify Inhibitors Of
Leishmania Major Pteridine Reductase 1
pdb|3H4V|E Chain E, Selective Screening And Design To Identify Inhibitors Of
Leishmania Major Pteridine Reductase 1
pdb|3H4V|F Chain F, Selective Screening And Design To Identify Inhibitors Of
Leishmania Major Pteridine Reductase 1
pdb|3H4V|G Chain G, Selective Screening And Design To Identify Inhibitors Of
Leishmania Major Pteridine Reductase 1
pdb|3H4V|H Chain H, Selective Screening And Design To Identify Inhibitors Of
Leishmania Major Pteridine Reductase 1
Length = 288
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 532 YSVSKTALLGLTKAVAQDLASENIRVNCLAPGIT--KTKFAAALYETEEAHEIAVSNVPM 589
Y+++K AL GLT++ A +LA IRVN + PG++ A++E S VP+
Sbjct: 194 YTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVWEGHR------SKVPL 247
Query: 590 -GRLAVPDEMGGIVAFLCSDDASYITGEVIVAAGG 623
R + E+ +V FLCS A YITG + GG
Sbjct: 248 YQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGG 282
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGL 673
Y+++K AL GLT+ A +LAP IRVN + PGL
Sbjct: 194 YTMAKGALEGLTRSAALELAPLQIRVNGVGPGL 226
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 83/219 (37%), Gaps = 37/219 (16%)
Query: 14 VAVVTASSDGIGFAIAKRLSAEGASVVIS-SRKESNVNKAVETLQKEG-------HQKIS 65
VA+VT ++ +G +IA+ L AEG +V + R + N TL +S
Sbjct: 8 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 67
Query: 66 GVVCHVAKKEDRQ----------KLFEHAEKKFGGIDILVSNAAV--------NPATG-- 105
V D +L +G D+LV+NA+ N G
Sbjct: 68 NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHE 127
Query: 106 PVV---ECPENVWDKIFEVNVKSTFLL----TQEVLPYIRKRNXXXXXXXXXXXXLAPFK 158
P V E E +F N + + L V K +
Sbjct: 128 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP 187
Query: 159 LLG--AYSVSKTALLGLTKAVAQDLASENIRVNCLAPGI 195
LLG Y+++K AL GLT++ A +LA IRVN + PG+
Sbjct: 188 LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL 226
>pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed
With Nadp+
Length = 274
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 23/137 (16%)
Query: 382 KVAVVTASSDGIGFAIAKRLSTE-GASVVISSRKESNVNKAVETLQKEG-----HQKISG 435
+VA+VT ++ GIG AIA+ L + VV+++R + AV+ LQ EG HQ
Sbjct: 3 RVALVTGANRGIGLAIARELCRQFSGDVVLTARDVARGQAAVQQLQAEGLSPRFHQ---- 58
Query: 436 VVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVN-PATGPVVECPENVWDKIFEVNVKS 494
+ + + L + K++GG+++LV+NAAV + P+ +D E+ +K+
Sbjct: 59 --LDIDDLQSIRALRDFLRKEYGGLNVLVNNAAVAFKSDDPM------PFDIKAEMTLKT 110
Query: 495 TFLLTQ----EVLPYIR 507
F T+ E+LP ++
Sbjct: 111 NFFATRNMCNELLPIMK 127
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 23/137 (16%)
Query: 13 KVAVVTASSDGIGFAIAKRLSAE-GASVVISSRKESNVNKAVETLQKEG-----HQKISG 66
+VA+VT ++ GIG AIA+ L + VV+++R + AV+ LQ EG HQ
Sbjct: 3 RVALVTGANRGIGLAIARELCRQFSGDVVLTARDVARGQAAVQQLQAEGLSPRFHQ---- 58
Query: 67 VVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVN-PATGPVVECPENVWDKIFEVNVKS 125
+ + + L + K++GG+++LV+NAAV + P+ +D E+ +K+
Sbjct: 59 --LDIDDLQSIRALRDFLRKEYGGLNVLVNNAAVAFKSDDPM------PFDIKAEMTLKT 110
Query: 126 TFLLTQ----EVLPYIR 138
F T+ E+LP ++
Sbjct: 111 NFFATRNMCNELLPIMK 127
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 36/58 (62%), Gaps = 11/58 (18%)
Query: 690 KLYGGIDILVSNAAVN-PANEPLVECSEVVWDKIFDVNLKSSFLLTQ----EVLPYMR 742
K YGG+++LV+NAAV +++P+ +D ++ LK++F T+ E+LP M+
Sbjct: 76 KEYGGLNVLVNNAAVAFKSDDPM------PFDIKAEMTLKTNFFATRNMCNELLPIMK 127
>pdb|3E9N|A Chain A, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM
pdb|3E9N|B Chain B, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM
pdb|3E9N|C Chain C, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM
pdb|3E9N|D Chain D, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM
pdb|3E9N|E Chain E, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM
pdb|3E9N|F Chain F, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM
pdb|3E9N|G Chain G, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM
pdb|3E9N|H Chain H, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM
Length = 245
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 88/204 (43%), Gaps = 20/204 (9%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKI-SGVV 437
L K+AVVT ++ G+G I K LS + + E A + EG + I S +V
Sbjct: 3 LKKKIAVVTGATGGMGIEIVKDLSRDHIVYALGRNPEHLAALA----EIEGVEPIESDIV 58
Query: 438 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPAT----GPVVECPENVWDKIFEVNVK 493
V ++ KL K +D LV AAV T G V E W ++NV
Sbjct: 59 KEVLEEGGVDKL-----KNLDHVDTLVHAAAVARDTTIEAGSVAE-----WHAHLDLNVI 108
Query: 494 STFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASE 553
L++++LP +R + P Y+ SK AL GL A ++ A+
Sbjct: 109 VPAELSRQLLPALRAASGCVIYINSGAGN-GPHPGNTIYAASKHALRGLADAFRKEEANN 167
Query: 554 NIRVNCLAPGITKTKFAAALYETE 577
IRV+ ++PG T T L +++
Sbjct: 168 GIRVSTVSPGPTNTPMLQGLMDSQ 191
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 82/190 (43%), Gaps = 20/190 (10%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKI-SGVV 68
L K+AVVT ++ G+G I K LS + + E A + EG + I S +V
Sbjct: 3 LKKKIAVVTGATGGMGIEIVKDLSRDHIVYALGRNPEHLAALA----EIEGVEPIESDIV 58
Query: 69 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPAT----GPVVECPENVWDKIFEVNVK 124
V ++ KL K +D LV AAV T G V E W ++NV
Sbjct: 59 KEVLEEGGVDKL-----KNLDHVDTLVHAAAVARDTTIEAGSVAE-----WHAHLDLNVI 108
Query: 125 STFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASE 184
L++++LP +R + P Y+ SK AL GL A ++ A+
Sbjct: 109 VPAELSRQLLPALRAASGCVIYINSGAGN-GPHPGNTIYAASKHALRGLADAFRKEEANN 167
Query: 185 NIRVNCLAPG 194
IRV+ ++PG
Sbjct: 168 GIRVSTVSPG 177
>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase
From Hyperthermophilic Archaeon Thermococcus Sibiricus
Complexed With 5- Hydroxy-Nadp
pdb|3TN7|B Chain B, Crystal Structure Of Short-Chain Alcohol Dehydrogenase
From Hyperthermophilic Archaeon Thermococcus Sibiricus
Complexed With 5- Hydroxy-Nadp
Length = 257
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 51/89 (57%)
Query: 382 KVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 441
KVAV+T +S GIG AIA+ L+ +G ++ + +R + K L +E ++ V+
Sbjct: 25 KVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVS 84
Query: 442 KKEDRQKLFEHAEKKFGGIDILVSNAAVN 470
K E ++ + ++FG +D++V+NA +
Sbjct: 85 KAESVEEFSKKVLERFGDVDVVVANAGLG 113
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 52/92 (56%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L KVAV+T +S GIG AIA+ L+ +G ++ + +R + K L +E ++
Sbjct: 22 LEMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHL 81
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVN 101
V+K E ++ + ++FG +D++V+NA +
Sbjct: 82 DVSKAESVEEFSKKVLERFGDVDVVVANAGLG 113
>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon
Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp
Length = 235
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 51/89 (57%)
Query: 382 KVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 441
KVAV+T +S GIG AIA+ L+ +G ++ + +R + K L +E ++ V+
Sbjct: 3 KVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVS 62
Query: 442 KKEDRQKLFEHAEKKFGGIDILVSNAAVN 470
K E ++ + ++FG +D++V+NA +
Sbjct: 63 KAESVEEFSKKVLERFGDVDVVVANAGLG 91
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 51/89 (57%)
Query: 13 KVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVA 72
KVAV+T +S GIG AIA+ L+ +G ++ + +R + K L +E ++ V+
Sbjct: 3 KVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVS 62
Query: 73 KKEDRQKLFEHAEKKFGGIDILVSNAAVN 101
K E ++ + ++FG +D++V+NA +
Sbjct: 63 KAESVEEFSKKVLERFGDVDVVVANAGLG 91
>pdb|4FS3|A Chain A, Crystal Structure Of Staphylococcus Aureus Enoyl-Acp
Reductase In Complex With Nadp And Afn-1252
Length = 256
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 108/262 (41%), Gaps = 45/262 (17%)
Query: 388 ASSDGIGFAIAKRLSTEGASVVISSRKESN---VNKAVETL-QKEGHQKISGVVCHVAKK 443
A+ I F +AK L GA +V + RKE + + K +E L Q E H + + +
Sbjct: 15 ANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAH------LYQIDVQ 68
Query: 444 EDRQKL--FEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 501
D + + FE K G ID + + A E++ + E + + FLL Q+
Sbjct: 69 SDEEVINGFEQIGKDVGNIDGVYHSIA--------FANMEDLRGRFSETS-REGFLLAQD 119
Query: 502 VLPYIRK--RNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKA--------VAQDLA 551
+ Y + +A L G ++V ++G+ KA +A DL
Sbjct: 120 ISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLG 179
Query: 552 SENIRVNCLAPGITKT-------KFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAF 604
+NIRVN ++ G +T F L E +E P+ R E+G A+
Sbjct: 180 PDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKE-------RAPLKRNVDQVEVGKTAAY 232
Query: 605 LCSDDASYITGEVIVAAGGMQS 626
L SD +S +TGE I G +
Sbjct: 233 LLSDLSSGVTGENIHVDSGFHA 254
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 81/192 (42%), Gaps = 31/192 (16%)
Query: 19 ASSDGIGFAIAKRLSAEGASVVISSRKESN---VNKAVETL-QKEGHQKISGVVCHVAKK 74
A+ I F +AK L GA +V + RKE + + K +E L Q E H + + +
Sbjct: 15 ANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAH------LYQIDVQ 68
Query: 75 EDRQKL--FEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQE 132
D + + FE K G ID + + A E++ + E + + FLL Q+
Sbjct: 69 SDEEVINGFEQIGKDVGNIDGVYHSIA--------FANMEDLRGRFSETS-REGFLLAQD 119
Query: 133 VLPYIRK--RNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKA--------VAQDLA 182
+ Y + +A L G ++V ++G+ KA +A DL
Sbjct: 120 ISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLG 179
Query: 183 SENIRVNCLAPG 194
+NIRVN ++ G
Sbjct: 180 PDNIRVNAISAG 191
Score = 35.8 bits (81), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 643 VSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
V+K +L K +A DL P+NIRVN ++ G IRT
Sbjct: 162 VAKASLEANVKYLALDLGPDNIRVNAISAGPIRT 195
>pdb|3G49|A Chain A, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of
11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of
Pf-915275
pdb|3G49|B Chain B, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of
11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of
Pf-915275
pdb|3G49|C Chain C, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of
11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of
Pf-915275
pdb|3G49|D Chain D, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of
11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of
Pf-915275
Length = 277
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 2/180 (1%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L GK +VT +S GIG IA L+ GA VV+++R + + K V + G +
Sbjct: 9 LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAG 68
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
+ ++ A GG+D+L+ N + +NV K EVN S +L
Sbjct: 69 SMEDMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNV-RKSMEVNFHSFVVL 127
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
+ +P + + + + L+ YS SK AL G + + + V+
Sbjct: 128 SVAAMPMLMQSQGSIAVVSSVAGKIT-YPLIAPYSASKFALDGFFSTLRSEFLVNKVNVS 186
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 2/180 (1%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L GK +VT +S GIG IA L+ GA VV+++R + + K V + G +
Sbjct: 9 LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAG 68
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
+ ++ A GG+D+L+ N + +NV K EVN S +L
Sbjct: 69 SMEDMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNV-RKSMEVNFHSFVVL 127
Query: 499 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 558
+ +P + + + + L+ YS SK AL G + + + V+
Sbjct: 128 SVAAMPMLMQSQGSIAVVSSVAGKIT-YPLIAPYSASKFALDGFFSTLRSEFLVNKVNVS 186
>pdb|3DWF|A Chain A, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid
Dehydrogenase Type 1 Mutant F278e
pdb|3DWF|B Chain B, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid
Dehydrogenase Type 1 Mutant F278e
pdb|3DWF|C Chain C, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid
Dehydrogenase Type 1 Mutant F278e
pdb|3DWF|D Chain D, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid
Dehydrogenase Type 1 Mutant F278e
Length = 276
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 2/180 (1%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L GK +VT +S GIG IA L+ GA VV+++R + + K V + G +
Sbjct: 9 LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAG 68
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
+ ++ A GG+D+L+ N + +NV K EVN S +L
Sbjct: 69 SMEDMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNV-RKSMEVNFHSFVVL 127
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
+ +P + + + + L+ YS SK AL G + + + V+
Sbjct: 128 SVAAMPMLMQSQGSIAVVSSVAGKIT-YPLIAPYSASKFALDGFFSTLRSEFLVNKVNVS 186
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 2/180 (1%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L GK +VT +S GIG IA L+ GA VV+++R + + K V + G +
Sbjct: 9 LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAG 68
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
+ ++ A GG+D+L+ N + +NV K EVN S +L
Sbjct: 69 SMEDMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNV-RKSMEVNFHSFVVL 127
Query: 499 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 558
+ +P + + + + L+ YS SK AL G + + + V+
Sbjct: 128 SVAAMPMLMQSQGSIAVVSSVAGKIT-YPLIAPYSASKFALDGFFSTLRSEFLVNKVNVS 186
>pdb|3LZ6|A Chain A, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With
Pf-877423
pdb|3LZ6|B Chain B, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With
Pf-877423
pdb|3LZ6|C Chain C, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With
Pf-877423
pdb|3LZ6|D Chain D, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With
Pf-877423
Length = 263
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 2/180 (1%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L GK +VT +S GIG IA L+ GA VV+++R + + K V + G +
Sbjct: 7 LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAG 66
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
+ ++ A GG+D+L+ N + +NV K EVN S +L
Sbjct: 67 SMEDMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNV-RKSMEVNFHSFVVL 125
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
+ +P + + + + L+ YS SK AL G + + + V+
Sbjct: 126 SVAAMPMLMQSQGSIAVVSSVAGKIT-YPLIAPYSASKFALDGFFSTLRSEFLVNKVNVS 184
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 2/180 (1%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L GK +VT +S GIG IA L+ GA VV+++R + + K V + G +
Sbjct: 7 LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAG 66
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
+ ++ A GG+D+L+ N + +NV K EVN S +L
Sbjct: 67 SMEDMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNV-RKSMEVNFHSFVVL 125
Query: 499 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 558
+ +P + + + + L+ YS SK AL G + + + V+
Sbjct: 126 SVAAMPMLMQSQGSIAVVSSVAGKIT-YPLIAPYSASKFALDGFFSTLRSEFLVNKVNVS 184
>pdb|3OIF|A Chain A, Crystal Structure Of Enoyl-Acp Reductases I (Fabi) From B.
Subtilis (Complex With Nad And Tcl)
pdb|3OIF|B Chain B, Crystal Structure Of Enoyl-Acp Reductases I (Fabi) From B.
Subtilis (Complex With Nad And Tcl)
pdb|3OIF|C Chain C, Crystal Structure Of Enoyl-Acp Reductases I (Fabi) From B.
Subtilis (Complex With Nad And Tcl)
pdb|3OIF|D Chain D, Crystal Structure Of Enoyl-Acp Reductases I (Fabi) From B.
Subtilis (Complex With Nad And Tcl)
pdb|3OIG|A Chain A, Crystal Structure Of Enoyl-Acp Reductases I (Fabi) From B.
Subtilis (Complex With Nad And Inh)
Length = 266
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 43/83 (51%)
Query: 534 VSKTALLGLTKAVAQDLASENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLA 593
V+K +L K +A DL ENIRVN ++ G +T A + + + P+ R
Sbjct: 163 VAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTT 222
Query: 594 VPDEMGGIVAFLCSDDASYITGE 616
P+E+G AFL SD + ITGE
Sbjct: 223 TPEEVGDTAAFLFSDMSRGITGE 245
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 10/82 (12%)
Query: 604 FLCSDDASYITGEVIVAAGGMQSRLTKSTVEFRFIGA---------YSVSKTALFGLTKV 654
L + +SY V+ AA M + S V ++G V+K +L K
Sbjct: 116 LLAHNISSYSLTAVVKAARPMMTE-GGSIVTLTYLGGELVMPNYNVMGVAKASLDASVKY 174
Query: 655 VAEDLAPENIRVNCLAPGLIRT 676
+A DL ENIRVN ++ G IRT
Sbjct: 175 LAADLGKENIRVNSISAGPIRT 196
Score = 29.3 bits (64), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 165 VSKTALLGLTKAVAQDLASENIRVNCLAPG 194
V+K +L K +A DL ENIRVN ++ G
Sbjct: 163 VAKASLDASVKYLAADLGKENIRVNSISAG 192
>pdb|2V0C|A Chain A, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed
With A Sulphamoyl Analogue Of Leucyl-Adenylate In The
Synthetic Site And An Adduct Of Amp With 5-Fluoro-1,3-
Dihydro-1-Hydroxy-2,1-Benzoxaborole (An2690) In The
Editing Site
Length = 878
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 237 SSYSPQYVEAAWYPWWEKQGFFKPEYGRKSIGEKNPKGKFVMVIPPPNVTGTLHLGHALT 296
Y+P +EA W +WE++GF K + +GK +++ P +G LH+GH
Sbjct: 2 EKYNPHAIEAKWQRFWEEKGFMK------AKDLPGGRGKQYVLVMFPYPSGDLHMGHLKN 55
Query: 297 NAVEDSITRWNRMKGKTTLWNPGCDHAGIATQ 328
+ D + R+ RM+G L G D G+ +
Sbjct: 56 YTMGDVLARFRRMQGYEVLHPMGWDAFGLPAE 87
>pdb|1OBH|A Chain A, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed
With A Pre-Transfer Editing Substrate Analogue In Both
Synthetic Active Site And Editing Site
pdb|2BTE|A Chain A, Thermus Thermophilus Leucyl-Trna Synthetase Complexed With
With A Trnaleu Transcript In The Post-Editing
Conformation And A Post-Transfer Editing Substrate
Analogue
pdb|2BTE|D Chain D, Thermus Thermophilus Leucyl-Trna Synthetase Complexed With
With A Trnaleu Transcript In The Post-Editing
Conformation And A Post-Transfer Editing Substrate
Analogue
pdb|2BYT|A Chain A, Thermus Thermophilus Leucyl-Trna Synthetase Complexed With
A Trnaleu Transcript In The Post-Editing Conformation
pdb|2BYT|D Chain D, Thermus Thermophilus Leucyl-Trna Synthetase Complexed With
A Trnaleu Transcript In The Post-Editing Conformation
pdb|1H3N|A Chain A, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed
With A Sulphamoyl Analogue Of Leucyl-Adenylate
pdb|1OBC|A Chain A, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed
With A Post-Transfer Editing Substrate Analogue
pdb|2V0G|A Chain A, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed
With A Trna(Leu) Transcript With 5-Fluoro-1,3-Dihydro-1-
Hydroxy-2,1-Benzoxaborole (An2690) Forming An Adduct To
The Ribose Of Adenosine-76 In The Enzyme Editing Site.
pdb|2V0G|D Chain D, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed
With A Trna(Leu) Transcript With 5-Fluoro-1,3-Dihydro-1-
Hydroxy-2,1-Benzoxaborole (An2690) Forming An Adduct To
The Ribose Of Adenosine-76 In The Enzyme Editing Site
Length = 878
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 237 SSYSPQYVEAAWYPWWEKQGFFKPEYGRKSIGEKNPKGKFVMVIPPPNVTGTLHLGHALT 296
Y+P +EA W +WE++GF K + +GK +++ P +G LH+GH
Sbjct: 2 EKYNPHAIEAKWQRFWEEKGFMK------AKDLPGGRGKQYVLVMFPYPSGDLHMGHLKN 55
Query: 297 NAVEDSITRWNRMKGKTTLWNPGCDHAGIATQ 328
+ D + R+ RM+G L G D G+ +
Sbjct: 56 YTMGDVLARFRRMQGYEVLHPMGWDAFGLPAE 87
>pdb|1XSE|A Chain A, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid
Dehydrogenase Type 1
pdb|1XSE|B Chain B, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid
Dehydrogenase Type 1
Length = 295
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 2/180 (1%)
Query: 10 LTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 69
L GK +VT +S GIG IA L+ GA VV+++R + + K V + G +
Sbjct: 30 LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAG 89
Query: 70 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 129
+ ++ A GG+D+L+ N + +NV K EVN S +L
Sbjct: 90 SMEDMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNV-RKSMEVNFHSFVVL 148
Query: 130 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 189
+ +P + + + + L+ YS SK AL G + + + V+
Sbjct: 149 SVAAMPMLMQSQGSIAVVSSVAGKIT-YPLIAPYSASKFALDGFFSTLRSEFLVNKVNVS 207
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 2/180 (1%)
Query: 379 LAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVC 438
L GK +VT +S GIG IA L+ GA VV+++R + + K V + G +
Sbjct: 30 LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAG 89
Query: 439 HVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLL 498
+ ++ A GG+D+L+ N + +NV K EVN S +L
Sbjct: 90 SMEDMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNV-RKSMEVNFHSFVVL 148
Query: 499 TQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVN 558
+ +P + + + + L+ YS SK AL G + + + V+
Sbjct: 149 SVAAMPMLMQSQGSIAVVSSVAGKIT-YPLIAPYSASKFALDGFFSTLRSEFLVNKVNVS 207
>pdb|1IOL|A Chain A, Estrogenic 17-beta Hydroxysteroid Dehydrogenase Complexed
17-beta- Estradiol
Length = 327
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 81/200 (40%), Gaps = 18/200 (9%)
Query: 380 AGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGH--QKISGVV 437
A V ++T S GIG +A RL+++ + + V + L+ +G + +
Sbjct: 1 ARTVVLITGCSSGIGLHLAVRLASDPS-------QSFKVYATLRDLKTQGRLWEAARALA 53
Query: 438 CHVAKKEDRQ------KLFEHAEKKF--GGIDILVSNAAVNPATGPVVECPENVWDKIFE 489
C E Q K A ++ G +D+LV NA + GP+ E+ + E
Sbjct: 54 CPPGSLETLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLG-LLGPLEALGEDAVASVLE 112
Query: 490 VNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQD 549
VNV T + Q LP +++R L Y SK AL GL +++A
Sbjct: 113 VNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVL 172
Query: 550 LASENIRVNCLAPGITKTKF 569
L + ++ + G T F
Sbjct: 173 LLPFGVHLSLIECGPVHTAF 192
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 72/175 (41%), Gaps = 18/175 (10%)
Query: 14 VAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGH--QKISGVVCHV 71
V ++T S GIG +A RL+++ + + V + L+ +G + + C
Sbjct: 4 VVLITGCSSGIGLHLAVRLASDPS-------QSFKVYATLRDLKTQGRLWEAARALACPP 56
Query: 72 AKKEDRQ------KLFEHAEKKF--GGIDILVSNAAVNPATGPVVECPENVWDKIFEVNV 123
E Q K A ++ G +D+LV NA + GP+ E+ + EVNV
Sbjct: 57 GSLETLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLG-LLGPLEALGEDAVASVLEVNV 115
Query: 124 KSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVA 178
T + Q LP +++R L Y SK AL GL +++A
Sbjct: 116 VGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLA 170
>pdb|2XOX|A Chain A, Crystal Structure Of Pteridine Reductase (Ptr1) From
Leishmania Donovani
pdb|2XOX|B Chain B, Crystal Structure Of Pteridine Reductase (Ptr1) From
Leishmania Donovani
Length = 288
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 9/95 (9%)
Query: 532 YSVSKTALLGLTKAVAQDLASENIRVNCLAPGIT--KTKFAAALYETEEAHEIAVSNVPM 589
Y+++K AL GLT++ A +LA IRVN + PG++ A+ E S VP+
Sbjct: 194 YTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLADDMPPAVREDYR------SKVPL 247
Query: 590 -GRLAVPDEMGGIVAFLCSDDASYITGEVIVAAGG 623
R + E+ +V FLCS A Y+TG + GG
Sbjct: 248 YQRDSSAAEVSDVVIFLCSSKAKYVTGTCVKVDGG 282
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 641 YSVSKTALFGLTKVVAEDLAPENIRVNCLAPGL 673
Y+++K AL GLT+ A +LAP IRVN + PGL
Sbjct: 194 YTMAKGALEGLTRSAALELAPLQIRVNGVGPGL 226
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 163 YSVSKTALLGLTKAVAQDLASENIRVNCLAPGI 195
Y+++K AL GLT++ A +LA IRVN + PG+
Sbjct: 194 YTMAKGALEGLTRSAALELAPLQIRVNGVGPGL 226
>pdb|1WZ2|A Chain A, The Crystal Structure Of Leucyl-Trna Synthetase And
Trna(Leucine) Complex
pdb|1WZ2|B Chain B, The Crystal Structure Of Leucyl-Trna Synthetase And
Trna(Leucine) Complex
Length = 967
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 244 VEAAWYPWWEKQGFFKPEYGRKSIGEKNPKGKFVMVIPPPNVTGTLHLGHALTNAVEDSI 303
+E W W + F+P +I +K + KF + + P ++G LH+GHA T + D I
Sbjct: 9 IEEKWQKRWLEAKIFEP-----NIRDKPKEKKFYITVAFPYLSGHLHVGHARTYTIPDVI 63
Query: 304 TRWNRMKGKTTL----WN-PGCDHAGIATQV 329
R+ RM+G L W+ G GIA ++
Sbjct: 64 ARFKRMQGYNVLFPMAWHITGSPIVGIAERI 94
>pdb|1QU2|A Chain A, Insights Into Editing From An Ile-Trna Synthetase
Structure With Trna(Ile) And Mupirocin
pdb|1QU3|A Chain A, Insights Into Editing From An Ile-Trna Synthetase
Structure With Trna(Ile) And Mupirocin
pdb|1FFY|A Chain A, Insights Into Editing From An Ile-Trna Synthetase
Structure With Trna(Ile) And Mupirocin
Length = 917
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 269 EKNPKGK--FVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAGIA 326
EKN KG F++ PP G LH+GHAL ++D I R+ M+G + PG D G+
Sbjct: 42 EKN-KGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLP 100
Query: 327 TQVVVEKK 334
+ + KK
Sbjct: 101 IEQALTKK 108
>pdb|1FDS|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1
Complexed With 17- Beta-Estradiol
pdb|1FDT|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1
Complexed With Estradiol And Nadp+
pdb|3KLM|X Chain X, 17beta-Hsd1 In Complex With Dht
Length = 327
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 81/200 (40%), Gaps = 18/200 (9%)
Query: 380 AGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGH--QKISGVV 437
A V ++T S GIG +A RL+++ + + V + L+ +G + +
Sbjct: 1 ARTVVLITGCSSGIGLHLAVRLASDPS-------QSFKVYATLRDLKTQGRLWEAARALA 53
Query: 438 CHVAKKEDRQ------KLFEHAEKKF--GGIDILVSNAAVNPATGPVVECPENVWDKIFE 489
C E Q K A ++ G +D+LV NA + GP+ E+ + +
Sbjct: 54 CPPGSLETLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLG-LLGPLEALGEDAVASVLD 112
Query: 490 VNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQD 549
VNV T + Q LP +++R L Y SK AL GL +++A
Sbjct: 113 VNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVL 172
Query: 550 LASENIRVNCLAPGITKTKF 569
L + ++ + G T F
Sbjct: 173 LLPFGVHLSLIECGPVHTAF 192
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 72/175 (41%), Gaps = 18/175 (10%)
Query: 14 VAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGH--QKISGVVCHV 71
V ++T S GIG +A RL+++ + + V + L+ +G + + C
Sbjct: 4 VVLITGCSSGIGLHLAVRLASDPS-------QSFKVYATLRDLKTQGRLWEAARALACPP 56
Query: 72 AKKEDRQ------KLFEHAEKKF--GGIDILVSNAAVNPATGPVVECPENVWDKIFEVNV 123
E Q K A ++ G +D+LV NA + GP+ E+ + +VNV
Sbjct: 57 GSLETLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLG-LLGPLEALGEDAVASVLDVNV 115
Query: 124 KSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVA 178
T + Q LP +++R L Y SK AL GL +++A
Sbjct: 116 VGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLA 170
>pdb|1FDW|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant
H221q Complexed With Estradiol
Length = 327
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 81/200 (40%), Gaps = 18/200 (9%)
Query: 380 AGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGH--QKISGVV 437
A V ++T S GIG +A RL+++ + + V + L+ +G + +
Sbjct: 1 ARTVVLITGCSSGIGLHLAVRLASDPS-------QSFKVYATLRDLKTQGRLWEAARALA 53
Query: 438 CHVAKKEDRQ------KLFEHAEKKF--GGIDILVSNAAVNPATGPVVECPENVWDKIFE 489
C E Q K A ++ G +D+LV NA + GP+ E+ + +
Sbjct: 54 CPPGSLETLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLG-LLGPLEALGEDAVASVLD 112
Query: 490 VNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQD 549
VNV T + Q LP +++R L Y SK AL GL +++A
Sbjct: 113 VNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVL 172
Query: 550 LASENIRVNCLAPGITKTKF 569
L + ++ + G T F
Sbjct: 173 LLPFGVHLSLIECGPVHTAF 192
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 72/175 (41%), Gaps = 18/175 (10%)
Query: 14 VAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGH--QKISGVVCHV 71
V ++T S GIG +A RL+++ + + V + L+ +G + + C
Sbjct: 4 VVLITGCSSGIGLHLAVRLASDPS-------QSFKVYATLRDLKTQGRLWEAARALACPP 56
Query: 72 AKKEDRQ------KLFEHAEKKF--GGIDILVSNAAVNPATGPVVECPENVWDKIFEVNV 123
E Q K A ++ G +D+LV NA + GP+ E+ + +VNV
Sbjct: 57 GSLETLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLG-LLGPLEALGEDAVASVLDVNV 115
Query: 124 KSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVA 178
T + Q LP +++R L Y SK AL GL +++A
Sbjct: 116 VGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLA 170
>pdb|1A27|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1
C-Terminal Deletion Mutant Complexed With Estradiol And
Nadp+
Length = 289
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 81/200 (40%), Gaps = 18/200 (9%)
Query: 380 AGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGH--QKISGVV 437
A V ++T S GIG +A RL+++ + + V + L+ +G + +
Sbjct: 1 ARTVVLITGCSSGIGLHLAVRLASDPS-------QSFKVYATLRDLKTQGRLWEAARALA 53
Query: 438 CHVAKKEDRQ------KLFEHAEKKF--GGIDILVSNAAVNPATGPVVECPENVWDKIFE 489
C E Q K A ++ G +D+LV NA + GP+ E+ + +
Sbjct: 54 CPPGSLETLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLG-LLGPLEALGEDAVASVLD 112
Query: 490 VNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQD 549
VNV T + Q LP +++R L Y SK AL GL +++A
Sbjct: 113 VNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVL 172
Query: 550 LASENIRVNCLAPGITKTKF 569
L + ++ + G T F
Sbjct: 173 LLPFGVHLSLIECGPVHTAF 192
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 72/175 (41%), Gaps = 18/175 (10%)
Query: 14 VAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGH--QKISGVVCHV 71
V ++T S GIG +A RL+++ + + V + L+ +G + + C
Sbjct: 4 VVLITGCSSGIGLHLAVRLASDPS-------QSFKVYATLRDLKTQGRLWEAARALACPP 56
Query: 72 AKKEDRQ------KLFEHAEKKF--GGIDILVSNAAVNPATGPVVECPENVWDKIFEVNV 123
E Q K A ++ G +D+LV NA + GP+ E+ + +VNV
Sbjct: 57 GSLETLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLG-LLGPLEALGEDAVASVLDVNV 115
Query: 124 KSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVA 178
T + Q LP +++R L Y SK AL GL +++A
Sbjct: 116 VGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLA 170
>pdb|1FDU|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant
H221l Complexed With Estradiol And Nadp+
pdb|1FDU|B Chain B, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant
H221l Complexed With Estradiol And Nadp+
pdb|1FDU|C Chain C, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant
H221l Complexed With Estradiol And Nadp+
pdb|1FDU|D Chain D, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant
H221l Complexed With Estradiol And Nadp+
pdb|1FDV|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant
H221l Complexed With Nad+
pdb|1FDV|B Chain B, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant
H221l Complexed With Nad+
pdb|1FDV|C Chain C, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant
H221l Complexed With Nad+
pdb|1FDV|D Chain D, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant
H221l Complexed With Nad+
Length = 327
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 81/200 (40%), Gaps = 18/200 (9%)
Query: 380 AGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGH--QKISGVV 437
A V ++T S GIG +A RL+++ + + V + L+ +G + +
Sbjct: 1 ARTVVLITGCSSGIGLHLAVRLASDPS-------QSFKVYATLRDLKTQGRLWEAARALA 53
Query: 438 CHVAKKEDRQ------KLFEHAEKKF--GGIDILVSNAAVNPATGPVVECPENVWDKIFE 489
C E Q K A ++ G +D+LV NA + GP+ E+ + +
Sbjct: 54 CPPGSLETLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLG-LLGPLEALGEDAVASVLD 112
Query: 490 VNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQD 549
VNV T + Q LP +++R L Y SK AL GL +++A
Sbjct: 113 VNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVL 172
Query: 550 LASENIRVNCLAPGITKTKF 569
L + ++ + G T F
Sbjct: 173 LLPFGVHLSLIECGPVHTAF 192
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 72/175 (41%), Gaps = 18/175 (10%)
Query: 14 VAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGH--QKISGVVCHV 71
V ++T S GIG +A RL+++ + + V + L+ +G + + C
Sbjct: 4 VVLITGCSSGIGLHLAVRLASDPS-------QSFKVYATLRDLKTQGRLWEAARALACPP 56
Query: 72 AKKEDRQ------KLFEHAEKKF--GGIDILVSNAAVNPATGPVVECPENVWDKIFEVNV 123
E Q K A ++ G +D+LV NA + GP+ E+ + +VNV
Sbjct: 57 GSLETLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLG-LLGPLEALGEDAVASVLDVNV 115
Query: 124 KSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVA 178
T + Q LP +++R L Y SK AL GL +++A
Sbjct: 116 VGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLA 170
>pdb|1EQU|A Chain A, Type 1 17-Beta Hydroxysteroid Dehydrogenase Equilin
Complexed With Nadp+
pdb|1EQU|B Chain B, Type 1 17-Beta Hydroxysteroid Dehydrogenase Equilin
Complexed With Nadp+
pdb|1DHT|A Chain A, Estrogenic 17-Beta Hydroxysteroid Dehydrogenase Complexed
Dihydrotestosterone
pdb|3DHE|A Chain A, Estrogenic 17-Beta Hydroxysteroid Dehydrogenase Complexed
Dehydroepiandrosterone
pdb|1I5R|A Chain A, Type 1 17-Beta Hydroxysteroid Dehydrogenase Em1745 Complex
pdb|1JTV|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase
Type 1 Complexed With Testosterone
pdb|1QYV|A Chain A, Crystal Structure Of Human Estrogenic
17beta-hydroxysteroid Dehydrogenase Complex With Nadp
pdb|1QYW|A Chain A, Crystal Structure Of Human Estrogenic
17beta-hydroxysteroid Dehydrogenase Comlex With
Androstanedione And Nadp
pdb|1QYX|A Chain A, Crystal Structure Of Human Estrogenic
17beta-Hydroxysteroid Dehydrogenase Complex With
Androstenedione And Nadp
pdb|1BHS|A Chain A, Human Estrogenic 17beta-hydroxysteroid Dehydrogenase
pdb|3DEY|X Chain X, Crystal Structure Of 17beta-Hsd1 With Dht In Normal And
Reverse Orientation.
pdb|3HB4|X Chain X, 17beta-Hydroxysteroid Dehydrogenase Type1 Complexed With
E2b
pdb|3HB5|X Chain X, Binary And Ternary Crystal Structures Of A Novel Inhibitor
Of 17 Beta-Hsd Type 1: A Lead Compound For Breast Cancer
Therapy
pdb|3KLP|X Chain X, 17beta-Hsd1 In Complex With A-Diol
pdb|3KM0|A Chain A, 17betahsd1 In Complex With 3beta-Diol
pdb|3KM0|B Chain B, 17betahsd1 In Complex With 3beta-Diol
Length = 327
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 81/200 (40%), Gaps = 18/200 (9%)
Query: 380 AGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGH--QKISGVV 437
A V ++T S GIG +A RL+++ + + V + L+ +G + +
Sbjct: 1 ARTVVLITGCSSGIGLHLAVRLASDPS-------QSFKVYATLRDLKTQGRLWEAARALA 53
Query: 438 CHVAKKEDRQ------KLFEHAEKKF--GGIDILVSNAAVNPATGPVVECPENVWDKIFE 489
C E Q K A ++ G +D+LV NA + GP+ E+ + +
Sbjct: 54 CPPGSLETLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLG-LLGPLEALGEDAVASVLD 112
Query: 490 VNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQD 549
VNV T + Q LP +++R L Y SK AL GL +++A
Sbjct: 113 VNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVL 172
Query: 550 LASENIRVNCLAPGITKTKF 569
L + ++ + G T F
Sbjct: 173 LLPFGVHLSLIECGPVHTAF 192
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 72/175 (41%), Gaps = 18/175 (10%)
Query: 14 VAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGH--QKISGVVCHV 71
V ++T S GIG +A RL+++ + + V + L+ +G + + C
Sbjct: 4 VVLITGCSSGIGLHLAVRLASDPS-------QSFKVYATLRDLKTQGRLWEAARALACPP 56
Query: 72 AKKEDRQ------KLFEHAEKKF--GGIDILVSNAAVNPATGPVVECPENVWDKIFEVNV 123
E Q K A ++ G +D+LV NA + GP+ E+ + +VNV
Sbjct: 57 GSLETLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLG-LLGPLEALGEDAVASVLDVNV 115
Query: 124 KSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVA 178
T + Q LP +++R L Y SK AL GL +++A
Sbjct: 116 VGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLA 170
>pdb|3EK2|A Chain A, Crystal Structure Of Eonyl-(Acyl Carrier Protein)
Reductase From Burkholderia Pseudomallei 1719b
pdb|3EK2|B Chain B, Crystal Structure Of Eonyl-(Acyl Carrier Protein)
Reductase From Burkholderia Pseudomallei 1719b
pdb|3EK2|C Chain C, Crystal Structure Of Eonyl-(Acyl Carrier Protein)
Reductase From Burkholderia Pseudomallei 1719b
pdb|3EK2|D Chain D, Crystal Structure Of Eonyl-(Acyl Carrier Protein)
Reductase From Burkholderia Pseudomallei 1719b
Length = 271
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 103/247 (41%), Gaps = 12/247 (4%)
Query: 379 LAGKVAVVTA--SSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGV 436
L GK ++T S+ I + IAK EGA + + + ++ E + G + +
Sbjct: 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELV--F 69
Query: 437 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIF----EVNV 492
C VA LF + + +D LV + P + + + + F +++
Sbjct: 70 PCDVADDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISA 129
Query: 493 KSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAP-FKLLGAYSVSKTALLGLTKAVAQDLA 551
S L + LP + P + +G ++K AL + +A L
Sbjct: 130 YSFPALAKAALPMLSDDASLLTLSYLGAERAIPNYNTMG---LAKAALEASVRYLAVSLG 186
Query: 552 SENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDAS 611
++ +RVN ++ G KT A+ + + + SN P+ R +++G AFL SD AS
Sbjct: 187 AKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQVGNAGAFLLSDLAS 246
Query: 612 YITGEVI 618
+T EV+
Sbjct: 247 GVTAEVM 253
>pdb|1WKB|A Chain A, Crystal Structure Of Leucyl-Trna Synthetase From The
Archaeon Pyrococcus Horikoshii Reveals A Novel Editing
Domain Orientation
Length = 810
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 244 VEAAWYPWWEKQGFFKPEYGRKSIGEKNPKGKFVMVIPPPNVTGTLHLGHALTNAVEDSI 303
+E W W + F+P +I +K + KF + + P ++G LH+GHA T + D I
Sbjct: 9 IEEKWQKRWLEAKIFEP-----NIRDKPKEKKFYITVAFPYLSGHLHVGHARTYTIPDVI 63
Query: 304 TRWNRMKGKTTL----WN-PGCDHAGIATQV 329
R+ RM+G L W+ G GIA ++
Sbjct: 64 ARFKRMQGYNVLFPMAWHITGSPIVGIAERI 94
>pdb|1JZQ|A Chain A, Isoleucyl-Trna Synthetase Complexed With Isoleucyl-
Adenylate Analogue
pdb|1JZS|A Chain A, Isoleucyl-trna Synthetase Complexed With Mupirocin
pdb|1ILE|A Chain A, Isoleucyl-Trna Synthetase
Length = 821
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 9/122 (7%)
Query: 252 WEKQGFFKPEYGRKSIGEKNPKGKFVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKG 311
W+++ F+ KS+ + ++ + PP G H+GHA + +D R+ M+G
Sbjct: 21 WKREKIFQ-----KSVENRKGGPRYTVYEGPPTANGLPHVGHAQARSYKDLFPRYKTMRG 75
Query: 312 KTTLWNPGCDHAGIATQVVVEKKLWREEKKTRHEIGREKF----IEKVWEWKKEVFSTST 367
G D G+ ++ VEKKL + K+ G E+F E V+ ++KE + +
Sbjct: 76 YYAPRRAGWDTHGLPVELEVEKKLGLKSKREIEAYGIERFNQACRESVFTYEKEWEAFTE 135
Query: 368 KI 369
+I
Sbjct: 136 RI 137
>pdb|3PJD|A Chain A, Structure Of Enr G93a Mutant-Nad+-Triclosan Complex
pdb|3PJD|B Chain B, Structure Of Enr G93a Mutant-Nad+-Triclosan Complex
Length = 270
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 107/261 (40%), Gaps = 26/261 (9%)
Query: 379 LAGKVAVVT--ASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGV 436
L+GK +VT AS I + IA+ + EGA + + + + + E + G + +
Sbjct: 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIV--L 61
Query: 437 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 496
C VA+ +F K + D V + A P + + + F
Sbjct: 62 QCDVAEDASIDTMFAELGKVWPKFDGFVHSIAFAPG--------DQLDGDYVNAVTREGF 113
Query: 497 LLTQEVLPY-IRKRNXXXXXXXXXXXXLAPFKLLGA-YSVSKTALLGLTKA--------V 546
+ ++ Y L LGA ++ ++GL KA +
Sbjct: 114 KIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYM 173
Query: 547 AQDLASENIRVNCLAPGITKTKFAAALYETEE--AHEIAVSNVPMGRLAVPDEMGGIVAF 604
A + E +RVN ++ G +T A+ + + + AH AV+ P+ R +++G AF
Sbjct: 174 ANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVT--PIRRTVTIEDVGNSAAF 231
Query: 605 LCSDDASYITGEVIVAAGGMQ 625
LCSD ++ I+GEV+ GG
Sbjct: 232 LCSDLSAGISGEVVHVDGGFS 252
>pdb|3PJE|A Chain A, Structure Of Enr G93s Mutant-Nad+-Triclosan Complex
pdb|3PJE|B Chain B, Structure Of Enr G93s Mutant-Nad+-Triclosan Complex
Length = 270
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 111/256 (43%), Gaps = 16/256 (6%)
Query: 379 LAGKVAVVT--ASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGV 436
L+GK +VT AS I + IA+ + EGA + + + + + E + G + +
Sbjct: 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIV--L 61
Query: 437 VCHVAKKEDRQKLFEHAEK---KFGGIDILVSNAAVNPATGPVVECPENVWDKI-FEVNV 492
C VA+ +F K KF G +S A + G V KI +++
Sbjct: 62 QCDVAEDASIDTMFAELGKVWPKFDGFVHSISFAPGDQLDGDYVNAVTREGFKIAHDISS 121
Query: 493 KSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLAP-FKLLGAYSVSKTALLGLTKAVAQDLA 551
S + + + + P + ++G ++K +L + +A +
Sbjct: 122 YSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMG---LAKASLEANVRYMANAMG 178
Query: 552 SENIRVNCLAPGITKTKFAAALYETEE--AHEIAVSNVPMGRLAVPDEMGGIVAFLCSDD 609
E +RVN ++ G +T A+ + + + AH AV+ P+ R +++G AFLCSD
Sbjct: 179 PEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVT--PIRRTVTIEDVGNSAAFLCSDL 236
Query: 610 ASYITGEVIVAAGGMQ 625
++ I+GEV+ GG
Sbjct: 237 SAGISGEVVHVDGGFS 252
>pdb|3PJF|A Chain A, Structure Of Enr G93v Mutant-Nad+-Triclosan Complex
pdb|3PJF|B Chain B, Structure Of Enr G93v Mutant-Nad+-Triclosan Complex
Length = 270
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 111/263 (42%), Gaps = 30/263 (11%)
Query: 379 LAGKVAVVT--ASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGV 436
L+GK +VT AS I + IA+ + EGA + + + + + E + G + +
Sbjct: 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIV--L 61
Query: 437 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVN--VKS 494
C VA+ +F K + D V + +V P + D + VN +
Sbjct: 62 QCDVAEDASIDTMFAELGKVWPKFDGFVHS---------IVFAPGDQLDGDY-VNAVTRE 111
Query: 495 TFLLTQEVLPY-IRKRNXXXXXXXXXXXXLAPFKLLGA-YSVSKTALLGLTKA------- 545
F + ++ Y L LGA ++ ++GL KA
Sbjct: 112 GFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVR 171
Query: 546 -VAQDLASENIRVNCLAPGITKTKFAAALYETEE--AHEIAVSNVPMGRLAVPDEMGGIV 602
+A + E +RVN ++ G +T A+ + + + AH AV+ P+ R +++G
Sbjct: 172 YMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVT--PIRRTVTIEDVGNSA 229
Query: 603 AFLCSDDASYITGEVIVAAGGMQ 625
AFLCSD ++ I+GEV+ GG
Sbjct: 230 AFLCSDLSAGISGEVVHVDGGFS 252
>pdb|2O2S|A Chain A, The Structure Of T. Gondii Enoyl Acyl Carrier Protein
Reductase In Complex With Nad And Triclosan
pdb|2O2S|B Chain B, The Structure Of T. Gondii Enoyl Acyl Carrier Protein
Reductase In Complex With Nad And Triclosan
pdb|3NJ8|A Chain A, Crystal Structure Of T. Gondii Enoyl Acyl Carrier Protein
Reductase With Bound Triclosan Like Inhibitor
pdb|3NJ8|B Chain B, Crystal Structure Of T. Gondii Enoyl Acyl Carrier Protein
Reductase With Bound Triclosan Like Inhibitor
Length = 315
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 116/289 (40%), Gaps = 42/289 (14%)
Query: 379 LAGKVAVVT--ASSDGIGFAIAKRLSTEGASVVISSRKE--SNVNKAVETLQKEGHQKI- 433
L G+ A V A S G G+AIAK L++ GA V + + K++++ + + +K+
Sbjct: 7 LRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLP 66
Query: 434 SGVVCHVAKKEDRQKLFEHAE----------------------------KKFGGIDILVS 465
G + A F+ E + G IDILV
Sbjct: 67 DGSLIEFAGVYPLDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVH 126
Query: 466 NAAVNP-ATGPVVECPENVWDKIFEVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLA 524
+ A P T P++E + + S L Q P + + +
Sbjct: 127 SLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNEGGSAVTLSYLAAERVV 186
Query: 525 PFKLLGAYSVSKTALLGLTKAVAQDLASE-NIRVNCLAPGITKTKFAAALYETEE----- 578
P G S +K AL T+ +A + + +RVN ++ G K++ A+A+ ++ E
Sbjct: 187 P-GYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSFID 245
Query: 579 -AHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVIVAAGGMQS 626
A + + +N P+ R D++GG FL S A ++G + G+ +
Sbjct: 246 YAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLHA 294
>pdb|2DKN|A Chain A, Crystal Structure Of The 3-alpha-hydroxysteroid
Dehydrogenase From Pseudomonas Sp. B-0831 Complexed With
Nadh
pdb|2DKN|B Chain B, Crystal Structure Of The 3-alpha-hydroxysteroid
Dehydrogenase From Pseudomonas Sp. B-0831 Complexed With
Nadh
Length = 255
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Query: 531 AYSVSKTALLGLTKAVAQDLASENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNV-PM 589
AY+ SK A+ L + D A +R+N +APG +T A E V P+
Sbjct: 152 AYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFVAPL 211
Query: 590 GRLAVPDEMGGIVAFLCSDDASYITGEVIVAAGGMQSRLTKST 632
GR + P E+ +AFL AS+I G V+ GGM + + T
Sbjct: 212 GRGSEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDALMRAKT 254
>pdb|1DFG|A Chain A, X-Ray Structure Of Escherichia Coli Enoyl Reductase With
Bound Nad And Benzo-Diazaborine
pdb|1DFG|B Chain B, X-Ray Structure Of Escherichia Coli Enoyl Reductase With
Bound Nad And Benzo-Diazaborine
pdb|1DFH|A Chain A, X-Ray Structure Of Escherichia Coli Enoyl Reductase With
Bound Nad And Thieno-Diazaborine
pdb|1DFH|B Chain B, X-Ray Structure Of Escherichia Coli Enoyl Reductase With
Bound Nad And Thieno-Diazaborine
pdb|1DFI|A Chain A, X-Ray Structure Of Escherichia Coli Enoyl Reductase With
Bound Nad
pdb|1DFI|B Chain B, X-Ray Structure Of Escherichia Coli Enoyl Reductase With
Bound Nad
pdb|1DFI|C Chain C, X-Ray Structure Of Escherichia Coli Enoyl Reductase With
Bound Nad
pdb|1DFI|D Chain D, X-Ray Structure Of Escherichia Coli Enoyl Reductase With
Bound Nad
pdb|1QG6|A Chain A, Crystal Structure Of E. Coli Enoyl Acyl Carrier Protein
Reductase In Complex With Nad And Triclosan
pdb|1QG6|B Chain B, Crystal Structure Of E. Coli Enoyl Acyl Carrier Protein
Reductase In Complex With Nad And Triclosan
pdb|1QG6|C Chain C, Crystal Structure Of E. Coli Enoyl Acyl Carrier Protein
Reductase In Complex With Nad And Triclosan
pdb|1QG6|D Chain D, Crystal Structure Of E. Coli Enoyl Acyl Carrier Protein
Reductase In Complex With Nad And Triclosan
pdb|1D8A|A Chain A, E. Coli Enoyl ReductaseNAD+TRICLOSAN COMPLEX
pdb|1D8A|B Chain B, E. Coli Enoyl ReductaseNAD+TRICLOSAN COMPLEX
Length = 261
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 106/261 (40%), Gaps = 26/261 (9%)
Query: 379 LAGKVAVVT--ASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGV 436
L+GK +VT AS I + IA+ + EGA + + + + + E + G + +
Sbjct: 3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIV--L 60
Query: 437 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 496
C VA+ +F K + D V + P + + + F
Sbjct: 61 QCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPG--------DQLDGDYVNAVTREGF 112
Query: 497 LLTQEVLPY-IRKRNXXXXXXXXXXXXLAPFKLLGA-YSVSKTALLGLTKA--------V 546
+ ++ Y L LGA ++ ++GL KA +
Sbjct: 113 KIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYM 172
Query: 547 AQDLASENIRVNCLAPGITKTKFAAALYETEE--AHEIAVSNVPMGRLAVPDEMGGIVAF 604
A + E +RVN ++ G +T A+ + + + AH AV+ P+ R +++G AF
Sbjct: 173 ANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVT--PIRRTVTIEDVGNSAAF 230
Query: 605 LCSDDASYITGEVIVAAGGMQ 625
LCSD ++ I+GEV+ GG
Sbjct: 231 LCSDLSAGISGEVVHVDGGFS 251
>pdb|1QSG|A Chain A, Crystal Structure Of Enoyl Reductase Inhibition By
Triclosan
pdb|1QSG|B Chain B, Crystal Structure Of Enoyl Reductase Inhibition By
Triclosan
pdb|1QSG|C Chain C, Crystal Structure Of Enoyl Reductase Inhibition By
Triclosan
pdb|1QSG|D Chain D, Crystal Structure Of Enoyl Reductase Inhibition By
Triclosan
pdb|1QSG|E Chain E, Crystal Structure Of Enoyl Reductase Inhibition By
Triclosan
pdb|1QSG|F Chain F, Crystal Structure Of Enoyl Reductase Inhibition By
Triclosan
pdb|1QSG|G Chain G, Crystal Structure Of Enoyl Reductase Inhibition By
Triclosan
pdb|1QSG|H Chain H, Crystal Structure Of Enoyl Reductase Inhibition By
Triclosan
Length = 265
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 106/261 (40%), Gaps = 26/261 (9%)
Query: 379 LAGKVAVVT--ASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGV 436
L+GK +VT AS I + IA+ + EGA + + + + + E + G + +
Sbjct: 7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIV--L 64
Query: 437 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 496
C VA+ +F K + D V + P + + + F
Sbjct: 65 QCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPG--------DQLDGDYVNAVTREGF 116
Query: 497 LLTQEVLPY-IRKRNXXXXXXXXXXXXLAPFKLLGA-YSVSKTALLGLTKA--------V 546
+ ++ Y L LGA ++ ++GL KA +
Sbjct: 117 KIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYM 176
Query: 547 AQDLASENIRVNCLAPGITKTKFAAALYETEE--AHEIAVSNVPMGRLAVPDEMGGIVAF 604
A + E +RVN ++ G +T A+ + + + AH AV+ P+ R +++G AF
Sbjct: 177 ANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVT--PIRRTVTIEDVGNSAAF 234
Query: 605 LCSDDASYITGEVIVAAGGMQ 625
LCSD ++ I+GEV+ GG
Sbjct: 235 LCSDLSAGISGEVVHVDGGFS 255
>pdb|1C14|A Chain A, Crystal Structure Of E Coli Enoyl Reductase-nad+-triclosan
Complex
pdb|1C14|B Chain B, Crystal Structure Of E Coli Enoyl Reductase-nad+-triclosan
Complex
pdb|1I2Z|A Chain A, E. Coli Enoyl Reductase In Complex With Nad And Brl-12654
pdb|1I2Z|B Chain B, E. Coli Enoyl Reductase In Complex With Nad And Brl-12654
pdb|1I30|A Chain A, E. Coli Enoyl Reductase +nad+sb385826
pdb|1I30|B Chain B, E. Coli Enoyl Reductase +nad+sb385826
pdb|1LX6|A Chain A, Crystal Structure Of E. Coli Enoyl Reductase-Nad+ With A
Bound Benzamide Inhibitor
pdb|1LX6|B Chain B, Crystal Structure Of E. Coli Enoyl Reductase-Nad+ With A
Bound Benzamide Inhibitor
pdb|1LXC|A Chain A, Crystal Structure Of E. Coli Enoyl Reductase-Nad+ With A
Bound Acrylamide Inhibitor
pdb|1LXC|B Chain B, Crystal Structure Of E. Coli Enoyl Reductase-Nad+ With A
Bound Acrylamide Inhibitor
pdb|1MFP|A Chain A, E. Coli Enoyl Reductase In Complex With Nad And Sb611113
pdb|1MFP|B Chain B, E. Coli Enoyl Reductase In Complex With Nad And Sb611113
pdb|2FHS|A Chain A, Structure Of Acyl Carrier Protein Bound To Fabi, The Enoyl
Reductase From Escherichia Coli
pdb|2FHS|B Chain B, Structure Of Acyl Carrier Protein Bound To Fabi, The Enoyl
Reductase From Escherichia Coli
Length = 262
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 106/261 (40%), Gaps = 26/261 (9%)
Query: 379 LAGKVAVVT--ASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGV 436
L+GK +VT AS I + IA+ + EGA + + + + + E + G + +
Sbjct: 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIV--L 61
Query: 437 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 496
C VA+ +F K + D V + P + + + F
Sbjct: 62 QCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPG--------DQLDGDYVNAVTREGF 113
Query: 497 LLTQEVLPY-IRKRNXXXXXXXXXXXXLAPFKLLGA-YSVSKTALLGLTKA--------V 546
+ ++ Y L LGA ++ ++GL KA +
Sbjct: 114 KIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYM 173
Query: 547 AQDLASENIRVNCLAPGITKTKFAAALYETEE--AHEIAVSNVPMGRLAVPDEMGGIVAF 604
A + E +RVN ++ G +T A+ + + + AH AV+ P+ R +++G AF
Sbjct: 174 ANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVT--PIRRTVTIEDVGNSAAF 231
Query: 605 LCSDDASYITGEVIVAAGGMQ 625
LCSD ++ I+GEV+ GG
Sbjct: 232 LCSDLSAGISGEVVHVDGGFS 252
>pdb|3TPC|A Chain A, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
pdb|3TPC|B Chain B, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
pdb|3TPC|C Chain C, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
pdb|3TPC|D Chain D, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
pdb|3TPC|E Chain E, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
pdb|3TPC|F Chain F, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
pdb|3TPC|G Chain G, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
pdb|3TPC|H Chain H, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
Length = 257
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 108/258 (41%), Gaps = 18/258 (6%)
Query: 378 RLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVV 437
+L +V +VT +S G+G A+ + L+ EGA+V+ K A E E +
Sbjct: 4 QLKSRVFIVTGASSGLGAAVTRXLAQEGATVLGLDLKP----PAGEEPAAELGAAVRFRN 59
Query: 438 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWD---KIFEVNVKS 494
V + D A+++FG + LV+ A P + + D + VN+
Sbjct: 60 ADVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIG 119
Query: 495 TF---LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFK-LLG--AYSVSKTALLGLTKAVAQ 548
TF L EV +A F +G AY+ SK + LT A+
Sbjct: 120 TFNXIRLAAEVXSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAAR 179
Query: 549 DLASENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPM-GRLAVPDEMGGIVAFLCS 607
+LA IRV +APGI T A ++ + ++VP RL +E +V +C
Sbjct: 180 ELARFGIRVVTIAPGIFDTPXXAG--XPQDVQDALAASVPFPPRLGRAEEYAALVKHICE 237
Query: 608 DDASYITGEVIVAAGGMQ 625
+ + + GEVI G ++
Sbjct: 238 N--TXLNGEVIRLDGALR 253
Score = 36.6 bits (83), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 81/196 (41%), Gaps = 13/196 (6%)
Query: 9 RLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVV 68
+L +V +VT +S G+G A+ + L+ EGA+V+ K A E E +
Sbjct: 4 QLKSRVFIVTGASSGLGAAVTRXLAQEGATVLGLDLKP----PAGEEPAAELGAAVRFRN 59
Query: 69 CHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWD---KIFEVNVKS 125
V + D A+++FG + LV+ A P + + D + VN+
Sbjct: 60 ADVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIG 119
Query: 126 TF---LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFK-LLG--AYSVSKTALLGLTKAVAQ 179
TF L EV +A F +G AY+ SK + LT A+
Sbjct: 120 TFNXIRLAAEVXSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAAR 179
Query: 180 DLASENIRVNCLAPGI 195
+LA IRV +APGI
Sbjct: 180 ELARFGIRVVTIAPGI 195
Score = 28.9 bits (63), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 640 AYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
AY+ SK + LT A +LA IRV +APG+ T
Sbjct: 162 AYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDT 198
>pdb|3H7A|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From
Rhodopseudomonas Palustris
pdb|3H7A|B Chain B, Crystal Structure Of Short-Chain Dehydrogenase From
Rhodopseudomonas Palustris
pdb|3H7A|C Chain C, Crystal Structure Of Short-Chain Dehydrogenase From
Rhodopseudomonas Palustris
pdb|3H7A|D Chain D, Crystal Structure Of Short-Chain Dehydrogenase From
Rhodopseudomonas Palustris
Length = 252
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 4/178 (2%)
Query: 14 VAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAK 73
VAV+ A D IG IAK+ +AEG +V R + V ++ G + ++ + A+
Sbjct: 10 VAVIGAG-DYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLD--AR 66
Query: 74 KEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQEV 133
ED F +A +++ + N N P++E + V+ K++E+ + F+ +E
Sbjct: 67 NEDEVTAFLNAADAHAPLEVTIFNVGAN-VNFPILETTDRVFRKVWEMACWAGFVSGRES 125
Query: 134 LPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCL 191
+ L A++ +K L + +++A++L +NI V L
Sbjct: 126 ARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMPKNIHVAHL 183
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 78/178 (43%), Gaps = 4/178 (2%)
Query: 383 VAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAK 442
VAV+ A D IG IAK+ + EG +V R + V ++ G + ++ + A+
Sbjct: 10 VAVIGAG-DYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLD--AR 66
Query: 443 KEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQEV 502
ED F +A +++ + N N P++E + V+ K++E+ + F+ +E
Sbjct: 67 NEDEVTAFLNAADAHAPLEVTIFNVGAN-VNFPILETTDRVFRKVWEMACWAGFVSGRES 125
Query: 503 LPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCL 560
+ L A++ +K L + +++A++L +NI V L
Sbjct: 126 ARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMPKNIHVAHL 183
>pdb|2O50|A Chain A, The Crystal Structure Of Toxoplasma Gondii Enoyl Acyl
Carrier Protein Reductase
pdb|2O50|B Chain B, The Crystal Structure Of Toxoplasma Gondii Enoyl Acyl
Carrier Protein Reductase
Length = 315
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 115/289 (39%), Gaps = 42/289 (14%)
Query: 379 LAGKVAVVT--ASSDGIGFAIAKRLSTEGASVVISSRKE--SNVNKAVETLQKEGHQKI- 433
L G+ A V A S G G+AIAK L++ GA V + + K++++ + + +K+
Sbjct: 7 LRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLP 66
Query: 434 SGVVCHVAKKEDRQKLFEHAE----------------------------KKFGGIDILVS 465
G + A F+ E + G IDILV
Sbjct: 67 DGSLIEFAGVYPLDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVH 126
Query: 466 NAAVNP-ATGPVVECPENVWDKIFEVNVKSTFLLTQEVLPYIRKRNXXXXXXXXXXXXLA 524
+ A P T P++E + + S L Q P + +
Sbjct: 127 SLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIXNEGGSAVTLSYLAAERVV 186
Query: 525 PFKLLGAYSVSKTALLGLTKAVAQDLASE-NIRVNCLAPGITKTKFAAALYETEE----- 578
P G S +K AL T+ +A + + +RVN ++ G K++ A+A+ ++ E
Sbjct: 187 P-GYGGGXSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSFID 245
Query: 579 -AHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVIVAAGGMQS 626
A + + +N P+ R D++GG FL S A ++G + G+ +
Sbjct: 246 YAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLHA 294
>pdb|2PFG|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Bigf2
Length = 276
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 21/135 (15%)
Query: 383 VAVVTASSDGIGFAIAKRLSTE-GASVVISSRKESNVNKAVETLQKEG-----HQKISGV 436
VA+VT + GIG AI + L VV+++R + AV+ LQ EG HQ
Sbjct: 6 VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQ----- 60
Query: 437 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 496
+ + + L + K++GG+D+LV+NA + A P ++ EV +K+ F
Sbjct: 61 -LDIDDLQSIRALRDFLRKEYGGLDVLVNNAGI--AFKVADPTPFHIQ---AEVTMKTNF 114
Query: 497 LLTQ----EVLPYIR 507
T+ E+LP I+
Sbjct: 115 FGTRDVXTELLPLIK 129
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 21/135 (15%)
Query: 14 VAVVTASSDGIGFAIAKRLSAE-GASVVISSRKESNVNKAVETLQKEG-----HQKISGV 67
VA+VT + GIG AI + L VV+++R + AV+ LQ EG HQ
Sbjct: 6 VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQ----- 60
Query: 68 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 127
+ + + L + K++GG+D+LV+NA + A P ++ EV +K+ F
Sbjct: 61 -LDIDDLQSIRALRDFLRKEYGGLDVLVNNAGI--AFKVADPTPFHIQ---AEVTMKTNF 114
Query: 128 LLTQ----EVLPYIR 138
T+ E+LP I+
Sbjct: 115 FGTRDVXTELLPLIK 129
>pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp
pdb|3BHI|A Chain A, Crystal Structure Of Human Carbonyl Reductase 1 In Complex
With Nadp
pdb|3BHJ|A Chain A, Crystal Structure Of Human Carbonyl Reductase 1 In Complex
With Glutathione
pdb|3BHM|A Chain A, Crystal Structure Of Human Carbonyl Reductase 1 In Complex
With S-Hydroxymethylglutathione
Length = 276
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 21/135 (15%)
Query: 383 VAVVTASSDGIGFAIAKRLSTE-GASVVISSRKESNVNKAVETLQKEG-----HQKISGV 436
VA+VT + GIG AI + L VV+++R + AV+ LQ EG HQ
Sbjct: 6 VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQ----- 60
Query: 437 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 496
+ + + L + K++GG+D+LV+NA + A P ++ EV +K+ F
Sbjct: 61 -LDIDDLQSIRALRDFLRKEYGGLDVLVNNAGI--AFKVADPTPFHIQ---AEVTMKTNF 114
Query: 497 LLTQ----EVLPYIR 507
T+ E+LP I+
Sbjct: 115 FGTRDVCTELLPLIK 129
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 21/135 (15%)
Query: 14 VAVVTASSDGIGFAIAKRLSAE-GASVVISSRKESNVNKAVETLQKEG-----HQKISGV 67
VA+VT + GIG AI + L VV+++R + AV+ LQ EG HQ
Sbjct: 6 VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQ----- 60
Query: 68 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 127
+ + + L + K++GG+D+LV+NA + A P ++ EV +K+ F
Sbjct: 61 -LDIDDLQSIRALRDFLRKEYGGLDVLVNNAGI--AFKVADPTPFHIQ---AEVTMKTNF 114
Query: 128 LLTQ----EVLPYIR 138
T+ E+LP I+
Sbjct: 115 FGTRDVCTELLPLIK 129
>pdb|3UCE|A Chain A, Crystal Structure Of A Small-Chain Dehydrogenase In
Complex With Nadph
pdb|3UCE|B Chain B, Crystal Structure Of A Small-Chain Dehydrogenase In
Complex With Nadph
pdb|3UCE|C Chain C, Crystal Structure Of A Small-Chain Dehydrogenase In
Complex With Nadph
pdb|3UCE|D Chain D, Crystal Structure Of A Small-Chain Dehydrogenase In
Complex With Nadph
pdb|3UCF|A Chain A, Crystal Structure Of A Small-chain Dehydrogenase
pdb|3UCF|B Chain B, Crystal Structure Of A Small-chain Dehydrogenase
pdb|3UCF|C Chain C, Crystal Structure Of A Small-chain Dehydrogenase
pdb|3UCF|D Chain D, Crystal Structure Of A Small-chain Dehydrogenase
Length = 223
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 100/243 (41%), Gaps = 33/243 (13%)
Query: 383 VAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAK 442
V VV + GIG +AK+L +E V ++SR+ IS
Sbjct: 8 VYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------LDIS-------- 45
Query: 443 KEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQEV 502
D + ++ + E G D L+ A G VV+ F+ L +
Sbjct: 46 --DEKSVYHYFET-IGAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHG 102
Query: 503 LPYIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCLAP 562
Y+++ + + A A+ TK +A++LA IRVN ++P
Sbjct: 103 ARYLKQGGSITLTSGMLSRKVVANTYVKA--AINAAIEATTKVLAKELAP--IRVNAISP 158
Query: 563 GITKTKFAAALY--ETEEAHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVIVA 620
G+TKT+ + + + ++ S++P+G++ ++ +A+L + SY+TG VI
Sbjct: 159 GLTKTEAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIA--MAYLFAIQNSYMTGTVIDV 216
Query: 621 AGG 623
GG
Sbjct: 217 DGG 219
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 22/26 (84%), Gaps = 2/26 (7%)
Query: 652 TKVVAEDLAPENIRVNCLAPGLIRTK 677
TKV+A++LAP IRVN ++PGL +T+
Sbjct: 141 TKVLAKELAP--IRVNAISPGLTKTE 164
>pdb|3PXX|A Chain A, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nicotinamide Adenine
Dinucleotide
pdb|3PXX|B Chain B, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nicotinamide Adenine
Dinucleotide
pdb|3PXX|C Chain C, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nicotinamide Adenine
Dinucleotide
pdb|3PXX|D Chain D, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nicotinamide Adenine
Dinucleotide
pdb|3PXX|E Chain E, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nicotinamide Adenine
Dinucleotide
pdb|3PXX|F Chain F, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nicotinamide Adenine
Dinucleotide
Length = 287
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 109/282 (38%), Gaps = 39/282 (13%)
Query: 378 RLAGKVAVVTASSDGIGFAIAKRLSTEGASVV---ISSRKESN---------VNKAVETL 425
R+ KV +VT + G G + A +L+ EGA ++ I E+N + +A +
Sbjct: 7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEV 66
Query: 426 QKEGHQKISGVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWD 485
+K G + + V V + + +A +FG +D++V+NA + P P +
Sbjct: 67 EKTGRKAYTAEV-DVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGA---HLPVQAFA 122
Query: 486 KIFEVNVKSTFLLTQEVLPYIRKRNXXXXXXXXX---------XXXLAPFKLLGAYSVSK 536
F+V+ LPY+ YS +K
Sbjct: 123 DAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAK 182
Query: 537 TALLGLTKAVAQDLASENIRVNCLAPGITKTKF--AAALY-------ETEEAHEIAVSNV 587
+ T +A LA ++IR N + P T +A +Y E + ++
Sbjct: 183 QLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFP 242
Query: 588 PMGRLAVP----DEMGGIVAFLCSDDASYITG-EVIVAAGGM 624
M + P ++ V FL SD++ Y+TG + V AG M
Sbjct: 243 AMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAM 284
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 16/141 (11%)
Query: 9 RLTGKVAVVTASSDGIGFAIAKRLSAEGASVV---ISSRKESN---------VNKAVETL 56
R+ KV +VT + G G + A +L+ EGA ++ I E+N + +A +
Sbjct: 7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEV 66
Query: 57 QKEGHQKISGVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWD 116
+K G + + V V + + +A +FG +D++V+NA + P P +
Sbjct: 67 EKTGRKAYTAEV-DVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGA---HLPVQAFA 122
Query: 117 KIFEVNVKSTFLLTQEVLPYI 137
F+V+ LPY+
Sbjct: 123 DAFDVDFVGVINTVHAALPYL 143
>pdb|1A8H|A Chain A, Methionyl-Trna Synthetase From Thermus Thermophilus
Length = 500
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 276 FVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAG 324
F + P V HLGHA T V D + RW+R+ G T + G D G
Sbjct: 5 FYVTTPIYYVNAEPHLGHAYTTVVADFLARWHRLDGYRTFFLTGTDEHG 53
>pdb|2D54|A Chain A, Crystal Structure Of Methionyl Trna Synthetase Y225a
Mutant From Thermus Thermophilus
Length = 502
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 276 FVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAG 324
F + P V HLGHA T V D + RW+R+ G T + G D G
Sbjct: 5 FYVTTPIYYVNAEPHLGHAYTTVVADFLARWHRLDGYRTFFLTGTDEHG 53
>pdb|1WOY|A Chain A, Crystal Structure Of Methionyl Trna Synthetase Y225f
Mutant From Thermus Thermophilus
pdb|2D5B|A Chain A, Crystal Structure Of Thermus Thermophilus Methionyl Trna
Synthetase Y225f Mutant Obtained In The Presence Of
Peg6000
Length = 500
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 24/49 (48%)
Query: 276 FVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAG 324
F + P V HLGHA T V D + RW+R+ G T + G D G
Sbjct: 5 FYVTTPIYYVNAEPHLGHAYTTVVADFLARWHRLDGYRTFFLTGTDEHG 53
>pdb|4AQ7|A Chain A, Ternary Complex Of E. Coli Leucyl-Trna Synthetase,
Trna(Leu) And Leucyl-Adenylate Analogue In The
Aminoacylation Conformation
pdb|4AQ7|D Chain D, Ternary Complex Of E. Coli Leucyl-Trna Synthetase,
Trna(Leu) And Leucyl-Adenylate Analogue In The
Aminoacylation Conformation
pdb|4ARC|A Chain A, Ternary Complex Of E. Coli Leucyl-Trna Synthetase,
Trna(Leu) And Leucine In The Editing Conformation
pdb|4ARI|A Chain A, Ternary Complex Of E. Coli Leucyl-Trna Synthetase,
Trna(Leu) And The Benzoxaborole An2679 In The Editing
Conformation
pdb|4AS1|A Chain A, Ternary Complex Of E. Coli Leucyl-Trna Synthetase,
Trna(Leu) And The Benzoxaborole An2679 In The Editing
Conformation
pdb|3ZGZ|A Chain A, Ternary Complex Of E. Coli Leucyl-trna Synthetase,
Trna(leu) And Toxic Moiety From Agrocin 84 (tm84) In
Aminoacylation- Like Conformation
pdb|3ZGZ|D Chain D, Ternary Complex Of E. Coli Leucyl-trna Synthetase,
Trna(leu) And Toxic Moiety From Agrocin 84 (tm84) In
Aminoacylation- Like Conformation
Length = 880
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 235 LPSSYSPQYVEAAWYPWWEKQGFFKPEYGRKSIGEKNPKGKFVMVIPPPNVTGTLHLGHA 294
+ Y P+ +E+ W+++ F+ + E K K+ + P +G LH+GH
Sbjct: 21 MQEQYRPEEIESKVQLHWDEKRTFE-------VTEDESKEKYYCLSMLPYPSGRLHMGHV 73
Query: 295 LTNAVEDSITRWNRMKGKTTLWNPGCDHAGIATQ 328
+ D I R+ RM GK L G D G+ +
Sbjct: 74 RNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAE 107
>pdb|1UAY|A Chain A, Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa
Dehydrogenase From Thermus Thermophilus Hb8
pdb|1UAY|B Chain B, Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa
Dehydrogenase From Thermus Thermophilus Hb8
Length = 242
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Query: 530 GAYSVSKTALLGLTKAVAQDLASENIRVNCLAPGITKTKFAAALYETEEAHEIAVSNVPM 589
AY+ SK ++ LT A++LA IRV +APG+ T L E +A A P
Sbjct: 146 AAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFP- 204
Query: 590 GRLAVPDEMGGIVAFLCSDDASYITGEVIVAAGGMQ 625
RL P+E +V + + + GEV+ G ++
Sbjct: 205 PRLGRPEEYAALVLHILEN--PMLNGEVVRLDGALR 238
Score = 30.4 bits (67), Expect = 3.4, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 161 GAYSVSKTALLGLTKAVAQDLASENIRVNCLAPGI 195
AY+ SK ++ LT A++LA IRV +APG+
Sbjct: 146 AAYAASKGGVVALTLPAARELAGWGIRVVTVAPGL 180
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 21/38 (55%)
Query: 639 GAYSVSKTALFGLTKVVAEDLAPENIRVNCLAPGLIRT 676
AY+ SK + LT A +LA IRV +APGL T
Sbjct: 146 AAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDT 183
>pdb|2PTG|A Chain A, Crystal Structure Of Eimeria Tenella Enoyl Reductase
pdb|2PTG|B Chain B, Crystal Structure Of Eimeria Tenella Enoyl Reductase
Length = 319
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 78/184 (42%), Gaps = 9/184 (4%)
Query: 451 EHAEKKFGGIDILVSNAAVNP-ATGPVVECPENVWDKIFEVNVKSTFLLTQEVLPYIRKR 509
E G IDILV + A P T P+++ + + S L Q LP +++
Sbjct: 125 EAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLMKEG 184
Query: 510 NXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLA-SENIRVNCLAPGITKTK 568
+ P G S +K AL + +A + + +RVNC++ G K++
Sbjct: 185 GSALALSYIASEKVIP-GYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSR 243
Query: 569 FAAALYETEE------AHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVIVAAG 622
A+A+ + + A + + +N P+ + D++G FL S A +TG +
Sbjct: 244 AASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDN 303
Query: 623 GMQS 626
G+ +
Sbjct: 304 GLHA 307
>pdb|2CSX|A Chain A, Crystal Structure Of Aquifex Aeolicus Methionyl-Trna
Synthetase Complexed With Trna(Met)
pdb|2CSX|B Chain B, Crystal Structure Of Aquifex Aeolicus Methionyl-Trna
Synthetase Complexed With Trna(Met)
pdb|2CT8|A Chain A, Crystal Structure Of Aquifex Aeolicus Methionyl-Trna
Synthetase Complexed With Trna(Met) And
Methionyl-Adenylate Anologue
pdb|2CT8|B Chain B, Crystal Structure Of Aquifex Aeolicus Methionyl-Trna
Synthetase Complexed With Trna(Met) And
Methionyl-Adenylate Anologue
Length = 497
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 25/54 (46%)
Query: 275 KFVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAGIATQ 328
KF + P V HLGHA T D+I R+ R++ + G D G+ Q
Sbjct: 6 KFYVTTPIYYVNDVPHLGHAYTTIAADTIARYYRLRDYDVFFLTGTDEHGLKIQ 59
>pdb|3U9L|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase (Nadph) From Sinorhizobium Meliloti
Length = 324
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 61/133 (45%), Gaps = 7/133 (5%)
Query: 13 KVAVVTASSDGIGFAIAKRLSAEGASVVIS-----SRKESNVNKAVETLQKEGHQKISGV 67
K+ ++T +S G G A+ L+ G V S R SNV +A+ ++ + +
Sbjct: 6 KIILITGASSGFGRLTAEALAGAGHRVYASXRDIVGRNASNV-EAIAGFARDNDVDLRTL 64
Query: 68 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 127
V + + + + G ID+L+ NA + GP + +++++NV ST
Sbjct: 65 ELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAG-HXVFGPAEAFTPEQFAELYDINVLSTQ 123
Query: 128 LLTQEVLPYIRKR 140
+ + LP+ R++
Sbjct: 124 RVNRAALPHXRRQ 136
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 61/133 (45%), Gaps = 7/133 (5%)
Query: 382 KVAVVTASSDGIGFAIAKRLSTEGASVVIS-----SRKESNVNKAVETLQKEGHQKISGV 436
K+ ++T +S G G A+ L+ G V S R SNV +A+ ++ + +
Sbjct: 6 KIILITGASSGFGRLTAEALAGAGHRVYASXRDIVGRNASNV-EAIAGFARDNDVDLRTL 64
Query: 437 VCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTF 496
V + + + + G ID+L+ NA + GP + +++++NV ST
Sbjct: 65 ELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAG-HXVFGPAEAFTPEQFAELYDINVLSTQ 123
Query: 497 LLTQEVLPYIRKR 509
+ + LP+ R++
Sbjct: 124 RVNRAALPHXRRQ 136
>pdb|3RD5|A Chain A, Crystal Structure Of A Putative Uncharacterized Protein
From Mycobacterium Paratuberculosis
Length = 291
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 59/142 (41%), Gaps = 19/142 (13%)
Query: 372 TAVNASRLAGKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQ 431
TA + A + V+T ++ G+G A+ L+ GA+V+++ R A T+ +
Sbjct: 7 TAADLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQ--- 63
Query: 432 KISGVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVN 491
V +D + A+ G D+L++NA ++ P + FE
Sbjct: 64 ----VEVRELDLQDLSSVRRFAD-GVSGADVLINNAG-------IMAVPYALTVDGFESQ 111
Query: 492 VKST----FLLTQEVLPYIRKR 509
+ + F LT +LP + R
Sbjct: 112 IGTNHLGHFALTNLLLPRLTDR 133
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 58/142 (40%), Gaps = 19/142 (13%)
Query: 3 TAVNASRLTGKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQ 62
TA + + V+T ++ G+G A+ L+ GA+V+++ R A T+ +
Sbjct: 7 TAADLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQ--- 63
Query: 63 KISGVVCHVAKKEDRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVN 122
V +D + A+ G D+L++NA ++ P + FE
Sbjct: 64 ----VEVRELDLQDLSSVRRFAD-GVSGADVLINNAG-------IMAVPYALTVDGFESQ 111
Query: 123 VKST----FLLTQEVLPYIRKR 140
+ + F LT +LP + R
Sbjct: 112 IGTNHLGHFALTNLLLPRLTDR 133
>pdb|3ZIU|A Chain A, Crystal Structure Of Mycoplasma Mobile Leucyl-trna
Synthetase With Leu-ams In The Active Site
pdb|3ZIU|B Chain B, Crystal Structure Of Mycoplasma Mobile Leucyl-trna
Synthetase With Leu-ams In The Active Site
Length = 637
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 7/90 (7%)
Query: 239 YSPQYVEAAWYPWWEKQGFFKPEYGRKSIGEKNPKGKFVMVIPPPNVTGTLHLGHALTNA 298
Y+ +E W WEK FK + + K + + P P+ +G LH+GH
Sbjct: 9 YNHNEIEKKWQTRWEKTKAFK------TTNKSKDKFYALDMFPYPSGSG-LHVGHPEGYT 61
Query: 299 VEDSITRWNRMKGKTTLWNPGCDHAGIATQ 328
D I+R+ R+KG L G D G+ +
Sbjct: 62 ATDIISRYKRLKGFDVLHPIGWDAFGLPAE 91
>pdb|3F4B|A Chain A, Crystal Structure Of Plasmodium Berghei
Enoyl-Acyl-Carrier- Protein Reductase With Triclosan
pdb|3F4B|B Chain B, Crystal Structure Of Plasmodium Berghei
Enoyl-Acyl-Carrier- Protein Reductase With Triclosan
pdb|3F4B|C Chain C, Crystal Structure Of Plasmodium Berghei
Enoyl-Acyl-Carrier- Protein Reductase With Triclosan
pdb|3F4B|D Chain D, Crystal Structure Of Plasmodium Berghei
Enoyl-Acyl-Carrier- Protein Reductase With Triclosan
Length = 323
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 23/119 (19%)
Query: 530 GAYSVSKTALLGLTKAVAQDLASE-NIRVNCLAPGITKTKFAAALY-------------- 574
G S +K AL T+ +A L + NIR+N ++ G K++ A A+
Sbjct: 191 GGMSSAKAALESDTRVLAYYLGRKYNIRINTISAGPLKSRAATAINKFNNNQKNNMNSSG 250
Query: 575 ETEE--------AHEIAVSNVPMGRLAVPDEMGGIVAFLCSDDASYITGEVIVAAGGMQ 625
ET++ A + + P+ + + ++G + +FL S ++S +TG+ I G+
Sbjct: 251 ETDKQNYSFIDYAIDYSEKYAPLKKKLLSTDVGSVASFLLSKESSAVTGQTIYVDNGLN 309
>pdb|1SNY|A Chain A, Carbonyl Reductase Sniffer Of D. Melanogaster
Length = 267
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 78/206 (37%), Gaps = 19/206 (9%)
Query: 385 VVTASSDGIGFAIAKRLST--EGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAK 442
++T + G+G + K L + + ++ + K +E L K H I + +
Sbjct: 25 LITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKN-HSNIHILEIDLRN 83
Query: 443 KEDRQKLFEHAE--KKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQ 500
+ KL E K G+++L +NA + P + + + N L +
Sbjct: 84 FDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIXLAK 143
Query: 501 EVLPYIRKR---NXXXXXXXXXXXXLAPFKLLG-----------AYSVSKTALLGLTKAV 546
LP ++K N + +LG AY SK+AL TK++
Sbjct: 144 ACLPLLKKAAKANESQPXGVGRAAIINXSSILGSIQGNTDGGXYAYRTSKSALNAATKSL 203
Query: 547 AQDLASENIRVNCLAPGITKTKFAAA 572
+ DL + I L PG KT +
Sbjct: 204 SVDLYPQRIXCVSLHPGWVKTDXGGS 229
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 75/197 (38%), Gaps = 19/197 (9%)
Query: 16 VVTASSDGIGFAIAKRLS--AEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAK 73
++T + G+G + K L + + ++ + K +E L K H I + +
Sbjct: 25 LITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKN-HSNIHILEIDLRN 83
Query: 74 KEDRQKLFEHAE--KKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQ 131
+ KL E K G+++L +NA + P + + + N L +
Sbjct: 84 FDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIXLAK 143
Query: 132 EVLPYIRKR---NXXXXXXXXXXXXLAPFKLLG-----------AYSVSKTALLGLTKAV 177
LP ++K N + +LG AY SK+AL TK++
Sbjct: 144 ACLPLLKKAAKANESQPXGVGRAAIINXSSILGSIQGNTDGGXYAYRTSKSALNAATKSL 203
Query: 178 AQDLASENIRVNCLAPG 194
+ DL + I L PG
Sbjct: 204 SVDLYPQRIXCVSLHPG 220
>pdb|3GUY|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE
FROM VIBRIO Parahaemolyticus
pdb|3GUY|B Chain B, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE
FROM VIBRIO Parahaemolyticus
pdb|3GUY|C Chain C, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE
FROM VIBRIO Parahaemolyticus
pdb|3GUY|D Chain D, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE
FROM VIBRIO Parahaemolyticus
pdb|3GUY|E Chain E, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE
FROM VIBRIO Parahaemolyticus
pdb|3GUY|F Chain F, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE
FROM VIBRIO Parahaemolyticus
pdb|3GUY|G Chain G, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE
FROM VIBRIO Parahaemolyticus
pdb|3GUY|H Chain H, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE
FROM VIBRIO Parahaemolyticus
Length = 230
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 76/185 (41%), Gaps = 9/185 (4%)
Query: 385 VVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAKKE 444
V+T +S G+G +AK EG + ++ R ES ++ L + + H +
Sbjct: 5 VITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASH----Q 60
Query: 445 DRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQEVLP 504
+ ++LFE + I V ++A + G + E + E N+ S + +E++
Sbjct: 61 EVEQLFEQLDS----IPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVK 116
Query: 505 YIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCLAPGI 564
+ + P Y K A+ GL ++V +L + +++ + PG
Sbjct: 117 RYKDQPVNVVMIMSTAAQ-QPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGG 175
Query: 565 TKTKF 569
T+F
Sbjct: 176 MATEF 180
Score = 32.7 bits (73), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 74/179 (41%), Gaps = 9/179 (5%)
Query: 16 VVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAKKE 75
V+T +S G+G +AK AEG + ++ R ES ++ L + + H +
Sbjct: 5 VITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASH----Q 60
Query: 76 DRQKLFEHAEKKFGGIDILVSNAAVNPATGPVVECPENVWDKIFEVNVKSTFLLTQEVLP 135
+ ++LFE + I V ++A + G + E + E N+ S + +E++
Sbjct: 61 EVEQLFEQLDS----IPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVK 116
Query: 136 YIRKRNXXXXXXXXXXXXLAPFKLLGAYSVSKTALLGLTKAVAQDLASENIRVNCLAPG 194
+ + P Y K A+ GL ++V +L + +++ + PG
Sbjct: 117 RYKDQPVNVVMIMSTAAQ-QPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPG 174
>pdb|3H97|A Chain A, Structure Of A Mutant Methionyl-trna Synthetase With
Modified Specificity
pdb|3H99|A Chain A, Structure Of A Mutant Methionyl-Trna Synthetase With
Modified Specificity Complexed With Methionine
pdb|3H9B|A Chain A, Structure Of A Mutant Methionyl-Trna Synthetase With
Modified Specificity Complexed With Azidonorleucine
Length = 560
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 275 KFVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKG 311
K ++ P G++HLGH L + D R+ RM+G
Sbjct: 19 KILVTCASPYANGSIHLGHMLEHIQADVWVRYQRMRG 55
>pdb|1P7P|A Chain A, Methionyl-trna Synthetase From Escherichia Coli Complexed
With Methionine Phosphonate
pdb|1PFU|A Chain A, Methionyl-Trna Synthetase From Escherichia Coli Complexed
With Methionine Phosphinate
pdb|1PFV|A Chain A, Methionyl-Trna Synthetase From Escherichia Coli Complexed
With Difluoromethionine
pdb|1PFW|A Chain A, Methionyl-Trna Synthetase From Escherichia Coli Complexed
With Trifluoromethionine
pdb|1PFY|A Chain A, Methionyl-Trna Synthetase From Escherichia Coli Complexed
With Methionyl Sulphamoyl Adenosine
pdb|1PG0|A Chain A, Methionyl-Trna Synthetase From Escherichia Coli Complexed
With Methioninyl Adenylate
pdb|1PG2|A Chain A, Methionyl-Trna Synthetase From Escherichia Coli Complexed
With Methionine And Adenosine
Length = 551
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 275 KFVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKG 311
K ++ P G++HLGH L + D R+ RM+G
Sbjct: 6 KILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRG 42
>pdb|1QQT|A Chain A, Methionyl-Trna Synthetase From Escherichia Coli
Length = 551
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 275 KFVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKG 311
K ++ P G++HLGH L + D R+ RM+G
Sbjct: 6 KILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRG 42
>pdb|3H9C|A Chain A, Structure Of Methionyl-Trna Synthetase: Crystal Form 2
Length = 547
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 275 KFVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKG 311
K ++ P G++HLGH L + D R+ RM+G
Sbjct: 6 KILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRG 42
>pdb|1F4L|A Chain A, Crystal Structure Of The E.Coli Methionyl-Trna Synthetase
Complexed With Methionine
Length = 551
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 275 KFVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKG 311
K ++ P G++HLGH L + D R+ RM+G
Sbjct: 7 KILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRG 43
>pdb|1YO6|A Chain A, Crystal Structure Of The Putative Carbonyl Reductase
Sniffer Of Caenorhabditis Elegans
pdb|1YO6|B Chain B, Crystal Structure Of The Putative Carbonyl Reductase
Sniffer Of Caenorhabditis Elegans
pdb|1YO6|C Chain C, Crystal Structure Of The Putative Carbonyl Reductase
Sniffer Of Caenorhabditis Elegans
pdb|1YO6|D Chain D, Crystal Structure Of The Putative Carbonyl Reductase
Sniffer Of Caenorhabditis Elegans
pdb|1YO6|E Chain E, Crystal Structure Of The Putative Carbonyl Reductase
Sniffer Of Caenorhabditis Elegans
pdb|1YO6|F Chain F, Crystal Structure Of The Putative Carbonyl Reductase
Sniffer Of Caenorhabditis Elegans
Length = 250
Score = 32.3 bits (72), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 608 DDASYITGEVIVAAGGMQSRLTKSTVEFRF-IGAYSVSKTALFGLTKVVAEDLAPENIRV 666
D S VI + G+ S ++ +F + AY +SK A+ + +A DL +N+ V
Sbjct: 138 DQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLV 197
Query: 667 NCLAPGLIRTKFGDRMIAM 685
PG ++T G + A+
Sbjct: 198 VNFCPGWVQTNLGGKNAAL 216
>pdb|3TUN|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1356
pdb|3TUN|B Chain B, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1356
pdb|4EG4|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1289
pdb|4EG4|B Chain B, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1289
pdb|4EG7|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1331
pdb|4EG7|B Chain B, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1331
pdb|4EGA|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1320
pdb|4EGA|B Chain B, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1320
pdb|3U1Z|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1433
pdb|3U1Z|B Chain B, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1433
Length = 542
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 276 FVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAG 324
F + P V H+GH + + D I R++R+KG+ G D G
Sbjct: 11 FFVTSPIYYVNAAPHIGHVYSTLITDVIGRYHRVKGERVFALTGTDEHG 59
>pdb|4EG1|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Substrate Methionine
pdb|4EG1|B Chain B, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Substrate Methionine
pdb|4EG3|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Product Methionyl-Adenylate
pdb|4EG3|B Chain B, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Product Methionyl-Adenylate
pdb|4EG6|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1325
pdb|4EG6|B Chain B, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1325
pdb|4EG8|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Compound Chem 89
pdb|4EG8|B Chain B, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Compound Chem 89
pdb|3U1E|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1387
pdb|3U1E|B Chain B, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1387
pdb|3U1F|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1392
pdb|3U1F|B Chain B, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1392
pdb|3U1G|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1415
pdb|3U1G|B Chain B, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1415
pdb|3U20|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1444
pdb|3U20|B Chain B, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1444
Length = 542
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 276 FVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAG 324
F + P V H+GH + + D I R++R+KG+ G D G
Sbjct: 11 FFVTSPIYYVNAAPHIGHVYSTLITDVIGRYHRVKGERVFALTGTDEHG 59
>pdb|4EG5|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1312
pdb|4EG5|B Chain B, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex
With Inhibitor Chem 1312
Length = 542
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 276 FVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAG 324
F + P V H+GH + + D I R++R+KG+ G D G
Sbjct: 11 FFVTSPIYYVNAAPHIGHVYSTLITDVIGRYHRVKGERVFALTGTDEHG 59
>pdb|2Z5L|A Chain A, The First Ketoreductase Of The Tylosin Pks
Length = 511
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 16 VVTASSDGIGFAIAKRLSAEGAS-VVISSRKESNVNKAVETLQK-EGHQ-KISGVVCHVA 72
++T IG +A+RL+AEGA +V++SR+ A E ++ GH ++ C VA
Sbjct: 263 LITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVA 322
Query: 73 KKE 75
+++
Sbjct: 323 ERD 325
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 385 VVTASSDGIGFAIAKRLSTEGAS-VVISSRKESNVNKAVETLQK-EGHQ-KISGVVCHVA 441
++T IG +A+RL+ EGA +V++SR+ A E ++ GH ++ C VA
Sbjct: 263 LITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVA 322
Query: 442 KKE 444
+++
Sbjct: 323 ERD 325
>pdb|3KFL|A Chain A, Leishmania Major Methionyl-Trna Synthetase In Complex With
Methionyladenylate And Pyrophosphate
Length = 564
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 276 FVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAG 324
F P V + H+GH + + D + R++R+KG+ G D G
Sbjct: 28 FFATTPIYYVNASPHIGHVYSTLIVDVLGRYHRVKGEEVFVMTGTDEHG 76
>pdb|3FNR|A Chain A, Crystal Structure Of Putative Arginyl T-Rna Synthetase
From Campylobacter Jejuni
Length = 464
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 268 GEKNPKGKFVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKG 311
GEK + F++ N TG LH+GHA D++TR R G
Sbjct: 25 GEKKQES-FLLEYVSANPTGPLHIGHARGAVFGDTLTRLARHLG 67
>pdb|1LU9|A Chain A, Structure Of Methylene-Tetrahydromethanopterin
Dehydrogenase From Methylobacterium Extorquens Am1
pdb|1LU9|B Chain B, Structure Of Methylene-Tetrahydromethanopterin
Dehydrogenase From Methylobacterium Extorquens Am1
pdb|1LU9|C Chain C, Structure Of Methylene-Tetrahydromethanopterin
Dehydrogenase From Methylobacterium Extorquens Am1
pdb|1LUA|A Chain A, Structure Of Methylene-Tetrahydromethanopterin
Dehydrogenase From Methylobacterium Extorquens Am1
Complexed With Nadp
pdb|1LUA|B Chain B, Structure Of Methylene-Tetrahydromethanopterin
Dehydrogenase From Methylobacterium Extorquens Am1
Complexed With Nadp
pdb|1LUA|C Chain C, Structure Of Methylene-Tetrahydromethanopterin
Dehydrogenase From Methylobacterium Extorquens Am1
Complexed With Nadp
Length = 287
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 12 GKVAVVTASSDGIGFAIAKRLSAEGASVVISSRKESNVNKAVETLQK 58
GK AVV A + +G A L+ EGA VV+ RK A +++ K
Sbjct: 119 GKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNK 165
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 381 GKVAVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQK 427
GK AVV A + +G A L+ EGA VV+ RK A +++ K
Sbjct: 119 GKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNK 165
>pdb|1BVR|A Chain A, M.Tb. Enoyl-Acp Reductase (Inha) In Complex With Nad+ And
C16-Fatty- Acyl-Substrate
pdb|1BVR|B Chain B, M.Tb. Enoyl-Acp Reductase (Inha) In Complex With Nad+ And
C16-Fatty- Acyl-Substrate
pdb|1BVR|C Chain C, M.Tb. Enoyl-Acp Reductase (Inha) In Complex With Nad+ And
C16-Fatty- Acyl-Substrate
pdb|1BVR|D Chain D, M.Tb. Enoyl-Acp Reductase (Inha) In Complex With Nad+ And
C16-Fatty- Acyl-Substrate
pdb|1BVR|E Chain E, M.Tb. Enoyl-Acp Reductase (Inha) In Complex With Nad+ And
C16-Fatty- Acyl-Substrate
pdb|1BVR|F Chain F, M.Tb. Enoyl-Acp Reductase (Inha) In Complex With Nad+ And
C16-Fatty- Acyl-Substrate
pdb|2IDZ|A Chain A, Crystal Structure Of Wild Type Enoyl-Acp(Coa) Reductase
From Mycobacterium Tuberculosis In Complex With Nadh-Inh
Length = 268
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 102/268 (38%), Gaps = 36/268 (13%)
Query: 384 AVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAKK 443
++T SS I F IA+ +GA +V++ + ++ + K + V +
Sbjct: 13 GIITDSS--IAFHIARVAQEQGAQLVLTGFDRLRL---IQRITDRLPAKAPLLELDVQNE 67
Query: 444 EDRQKLFEHAEKKFGG---IDILVSNAAVNPATG----PVVECPENVWDKIFEVNVKSTF 496
E L + G +D +V + P TG P + P K ++ S
Sbjct: 68 EHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYA 127
Query: 497 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAY---SVSKTALLGLTKAVAQDLASE 553
+ + +LP + P + + AY +V+K+AL + + VA++
Sbjct: 128 SMAKALLPIMNPGGSIVGMD------FDPSRAMPAYNWMTVAKSALESVNRFVAREAGKY 181
Query: 554 NIRVNCLAPGITKTKFAAALYETEEAHEIAVS----------NVPMG---RLAVPDEMGG 600
+R N +A G +T +A+ E P+G + A P +
Sbjct: 182 GVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATP--VAK 239
Query: 601 IVAFLCSDDASYITGEVIVAAGGMQSRL 628
V L SD TG++I A GG ++L
Sbjct: 240 TVCALLSDWLPATTGDIIYADGGAHTQL 267
>pdb|1P44|A Chain A, Targeting Tuberculosis And Malaria Through Inhibition Of
Enoyl Reductase: Compound Activity And Structural Data
pdb|1P44|B Chain B, Targeting Tuberculosis And Malaria Through Inhibition Of
Enoyl Reductase: Compound Activity And Structural Data
pdb|1P44|C Chain C, Targeting Tuberculosis And Malaria Through Inhibition Of
Enoyl Reductase: Compound Activity And Structural Data
pdb|1P44|D Chain D, Targeting Tuberculosis And Malaria Through Inhibition Of
Enoyl Reductase: Compound Activity And Structural Data
pdb|1P44|E Chain E, Targeting Tuberculosis And Malaria Through Inhibition Of
Enoyl Reductase: Compound Activity And Structural Data
pdb|1P44|F Chain F, Targeting Tuberculosis And Malaria Through Inhibition Of
Enoyl Reductase: Compound Activity And Structural Data
pdb|1P45|A Chain A, Targeting Tuberculosis And Malaria Through Inhibition Of
Enoyl Reductase: Compound Activity And Structural Data
pdb|1P45|B Chain B, Targeting Tuberculosis And Malaria Through Inhibition Of
Enoyl Reductase: Compound Activity And Structural Data
pdb|2B35|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Inhibited By Triclosan
pdb|2B35|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Inhibited By Triclosan
pdb|2B35|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Inhibited By Triclosan
pdb|2B35|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Inhibited By Triclosan
pdb|2B35|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Inhibited By Triclosan
pdb|2B35|F Chain F, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Inhibited By Triclosan
pdb|2B36|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Inhibited By 5-Pentyl-2-Phenoxyphenol
pdb|2B36|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Inhibited By 5-Pentyl-2-Phenoxyphenol
pdb|2B36|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Inhibited By 5-Pentyl-2-Phenoxyphenol
pdb|2B36|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Inhibited By 5-Pentyl-2-Phenoxyphenol
pdb|2B36|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Inhibited By 5-Pentyl-2-Phenoxyphenol
pdb|2B36|F Chain F, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Inhibited By 5-Pentyl-2-Phenoxyphenol
pdb|2B37|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Inhibited By 5-Octyl-2-Phenoxyphenol
pdb|2B37|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Inhibited By 5-Octyl-2-Phenoxyphenol
pdb|2B37|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Inhibited By 5-Octyl-2-Phenoxyphenol
pdb|2B37|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Inhibited By 5-Octyl-2-Phenoxyphenol
pdb|2B37|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Inhibited By 5-Octyl-2-Phenoxyphenol
pdb|2B37|F Chain F, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Inhibited By 5-Octyl-2-Phenoxyphenol
pdb|2AQ8|A Chain A, Crystal Structure Of Wild-type Of Enoyl-acp(coa) Reductase
From Mycobacterium Tuberculosis In Complex With Nadh.
pdb|2H7I|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Complexed With
1-Cyclohexyl-5-Oxo-N-Phenylpyrrolidine-3-Carboxamide
pdb|2H7L|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Complexed With
N-(3-Bromophenyl)-1-Cyclohexyl-5-Oxopyrrolidine-3-
Carboxamide
pdb|2H7M|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Complexed With
1-Cyclohexyl-N-(3,5-Dichlorophenyl)-5-Oxopyrrolidine-
3-Carboxamide
pdb|2H7N|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Complexed With
N-(5-Chloro-2-Methylphenyl)-1-Cyclohexyl-5-
Oxopyrrolidine-3-Carboxamide
pdb|2H7P|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Enoyl
Reductase (Inha) Complexed With
N-(3-Chloro-2-Methylphenyl)-1-Cyclohexyl- 5-
Oxopyrrolidine-3-Carboxamide
pdb|2NSD|A Chain A, Enoyl Acyl Carrier Protein Reductase Inha In Complex With
N- (4-Methylbenzoyl)-4-Benzylpiperidine
pdb|2NSD|B Chain B, Enoyl Acyl Carrier Protein Reductase Inha In Complex With
N- (4-Methylbenzoyl)-4-Benzylpiperidine
pdb|2PR2|A Chain A, Structure Of Mycobacterium Tuberculosis Enoyl-Acp
Reductase With Bound Inh-Nadp.
pdb|3FNE|A Chain A, Crystal Structure Of Inha Bound To Triclosan Derivative 17
pdb|3FNE|B Chain B, Crystal Structure Of Inha Bound To Triclosan Derivative 17
pdb|3FNE|C Chain C, Crystal Structure Of Inha Bound To Triclosan Derivative 17
pdb|3FNE|D Chain D, Crystal Structure Of Inha Bound To Triclosan Derivative 17
pdb|3FNF|A Chain A, Crystal Structure Of Inha Bound To Triclosan Derivative
pdb|3FNF|B Chain B, Crystal Structure Of Inha Bound To Triclosan Derivative
pdb|3FNF|C Chain C, Crystal Structure Of Inha Bound To Triclosan Derivative
pdb|3FNF|D Chain D, Crystal Structure Of Inha Bound To Triclosan Derivative
pdb|3FNG|A Chain A, Crystal Structure Of Inha Bound To Triclosan Derivative
pdb|3FNH|A Chain A, Crystal Structure Of Inha Bound To Triclosan Derivative
pdb|2X22|A Chain A, Crystal Structure Of M. Tuberculosis Inha Inhibited By
Pt70
pdb|2X22|B Chain B, Crystal Structure Of M. Tuberculosis Inha Inhibited By
Pt70
pdb|2X23|A Chain A, Crystal Structure Of M. Tuberculosis Inha Inhibited By
Pt70
pdb|2X23|B Chain B, Crystal Structure Of M. Tuberculosis Inha Inhibited By
Pt70
pdb|2X23|E Chain E, Crystal Structure Of M. Tuberculosis Inha Inhibited By
Pt70
pdb|2X23|G Chain G, Crystal Structure Of M. Tuberculosis Inha Inhibited By
Pt70
pdb|3OEW|A Chain A, Crystal Structure Of Wild-Type Inha:nadh Complex
pdb|4DRE|A Chain A, Mycobacterium Tuberculosis Inha In Complex With Nadh
Length = 269
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 102/268 (38%), Gaps = 36/268 (13%)
Query: 384 AVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAKK 443
++T SS I F IA+ +GA +V++ + ++ + K + V +
Sbjct: 14 GIITDSS--IAFHIARVAQEQGAQLVLTGFDRLRL---IQRITDRLPAKAPLLELDVQNE 68
Query: 444 EDRQKLFEHAEKKFGG---IDILVSNAAVNPATG----PVVECPENVWDKIFEVNVKSTF 496
E L + G +D +V + P TG P + P K ++ S
Sbjct: 69 EHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYA 128
Query: 497 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAY---SVSKTALLGLTKAVAQDLASE 553
+ + +LP + P + + AY +V+K+AL + + VA++
Sbjct: 129 SMAKALLPIMNPGGSIVGMD------FDPSRAMPAYNWMTVAKSALESVNRFVAREAGKY 182
Query: 554 NIRVNCLAPGITKTKFAAALYETEEAHEIAVS----------NVPMG---RLAVPDEMGG 600
+R N +A G +T +A+ E P+G + A P +
Sbjct: 183 GVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATP--VAK 240
Query: 601 IVAFLCSDDASYITGEVIVAAGGMQSRL 628
V L SD TG++I A GG ++L
Sbjct: 241 TVCALLSDWLPATTGDIIYADGGAHTQL 268
>pdb|2H9I|A Chain A, Mycobacterium Tuberculosis Inha Bound With Eth-Nad Adduct
pdb|2NTJ|A Chain A, Mycobacterium Tuberculosis Inha Bound With Pth-Nad Adduct
pdb|2NTJ|B Chain B, Mycobacterium Tuberculosis Inha Bound With Pth-Nad Adduct
pdb|1ENY|A Chain A, Crystal Structure And Function Of The Isoniazid Target Of
Mycobacterium Tuberculosis
pdb|1ZID|A Chain A, Long Fatty Acid Chain Enoyl-Acp Reductase (Inha) In
Complex With An Isonicotinic-Acyl-Nadh Inhibitor
Length = 268
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 102/268 (38%), Gaps = 36/268 (13%)
Query: 384 AVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAKK 443
++T SS I F IA+ +GA +V++ + ++ + K + V +
Sbjct: 13 GIITDSS--IAFHIARVAQEQGAQLVLTGFDRLRL---IQRITDRLPAKAPLLELDVQNE 67
Query: 444 EDRQKLFEHAEKKFGG---IDILVSNAAVNPATG----PVVECPENVWDKIFEVNVKSTF 496
E L + G +D +V + P TG P + P K ++ S
Sbjct: 68 EHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYA 127
Query: 497 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAY---SVSKTALLGLTKAVAQDLASE 553
+ + +LP + P + + AY +V+K+AL + + VA++
Sbjct: 128 SMAKALLPIMNPGGSIVGMD------FDPSRAMPAYNWMTVAKSALESVNRFVAREAGKY 181
Query: 554 NIRVNCLAPGITKTKFAAALYETEEAHEIAVS----------NVPMG---RLAVPDEMGG 600
+R N +A G +T +A+ E P+G + A P +
Sbjct: 182 GVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATP--VAK 239
Query: 601 IVAFLCSDDASYITGEVIVAAGGMQSRL 628
V L SD TG++I A GG ++L
Sbjct: 240 TVCALLSDWLPATTGDIIYADGGAHTQL 267
>pdb|4DQU|A Chain A, Mycobacterium Tuberculosis Inha-D148g Mutant In Complex
With Nadh
Length = 269
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 102/268 (38%), Gaps = 36/268 (13%)
Query: 384 AVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAKK 443
++T SS I F IA+ +GA +V++ + ++ + K + V +
Sbjct: 14 GIITDSS--IAFHIARVAQEQGAQLVLTGFDRLRL---IQRITDRLPAKAPLLELDVQNE 68
Query: 444 EDRQKLFEHAEKKFGG---IDILVSNAAVNPATG----PVVECPENVWDKIFEVNVKSTF 496
E L + G +D +V + P TG P + P K ++ S
Sbjct: 69 EHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYA 128
Query: 497 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAY---SVSKTALLGLTKAVAQDLASE 553
+ + +LP + P + + AY +V+K+AL + + VA++
Sbjct: 129 SMAKALLPIMNPGGSIVGMG------FDPSRAMPAYNWMTVAKSALESVNRFVAREAGKY 182
Query: 554 NIRVNCLAPGITKTKFAAALYETEEAHEIAVS----------NVPMG---RLAVPDEMGG 600
+R N +A G +T +A+ E P+G + A P +
Sbjct: 183 GVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATP--VAK 240
Query: 601 IVAFLCSDDASYITGEVIVAAGGMQSRL 628
V L SD TG++I A GG ++L
Sbjct: 241 TVCALLSDWLPATTGDIIYADGGAHTQL 268
>pdb|1CP2|A Chain A, Nitrogenase Iron Protein From Clostridium Pasteurianum
pdb|1CP2|B Chain B, Nitrogenase Iron Protein From Clostridium Pasteurianum
Length = 269
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 15/106 (14%)
Query: 47 SNVNKAVETLQKEGHQKISGVVCHVAKKEDRQKLFEHAEKKFGGIDI-------LVSNAA 99
+N++K ++ K G ++ G++C+ K + +L + K+ G I +V+ A
Sbjct: 159 NNISKGIQKYAKSGGVRLGGIICNSRKVANEYELLDAFAKELGSQLIHFVPRSPMVTKAE 218
Query: 100 VNPAT----GPVVECPENVWDKIFEVNVKSTFL----LTQEVLPYI 137
+N T P E E + +V+ F+ +TQE L I
Sbjct: 219 INKQTVIEYDPTCEQAEEYRELARKVDANELFVIPKPMTQERLEEI 264
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 15/106 (14%)
Query: 416 SNVNKAVETLQKEGHQKISGVVCHVAKKEDRQKLFEHAEKKFGGIDI-------LVSNAA 468
+N++K ++ K G ++ G++C+ K + +L + K+ G I +V+ A
Sbjct: 159 NNISKGIQKYAKSGGVRLGGIICNSRKVANEYELLDAFAKELGSQLIHFVPRSPMVTKAE 218
Query: 469 VNPAT----GPVVECPENVWDKIFEVNVKSTFL----LTQEVLPYI 506
+N T P E E + +V+ F+ +TQE L I
Sbjct: 219 INKQTVIEYDPTCEQAEEYRELARKVDANELFVIPKPMTQERLEEI 264
>pdb|3OF2|A Chain A, Crystal Structure Of Inha_t266d:nadh Complex
Length = 269
Score = 30.0 bits (66), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 101/268 (37%), Gaps = 36/268 (13%)
Query: 384 AVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAKK 443
++T SS I F IA+ +GA +V++ + ++ + K + V +
Sbjct: 14 GIITDSS--IAFHIARVAQEQGAQLVLTGFDRLRL---IQRITDRLPAKAPLLELDVQNE 68
Query: 444 EDRQKLFEHAEKKFGG---IDILVSNAAVNPATG----PVVECPENVWDKIFEVNVKSTF 496
E L + G +D +V + P TG P + P K ++ S
Sbjct: 69 EHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYA 128
Query: 497 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAY---SVSKTALLGLTKAVAQDLASE 553
+ + +LP + P + + AY +V+K+AL + + VA++
Sbjct: 129 SMAKALLPIMNPGGSIVGMD------FDPSRAMPAYNWMTVAKSALESVNRFVAREAGKY 182
Query: 554 NIRVNCLAPGITKTKFAAALYETEEAHEIAVS----------NVPMG---RLAVPDEMGG 600
+R N +A G +T +A+ E P+G + A P +
Sbjct: 183 GVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATP--VAK 240
Query: 601 IVAFLCSDDASYITGEVIVAAGGMQSRL 628
V L SD TG++I A GG +L
Sbjct: 241 TVCALLSDWLPATTGDIIYADGGAHDQL 268
>pdb|3OEY|A Chain A, Crystal Structure Of Inha_t266e:nadh Complex
Length = 269
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 101/268 (37%), Gaps = 36/268 (13%)
Query: 384 AVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAKK 443
++T SS I F IA+ +GA +V++ + ++ + K + V +
Sbjct: 14 GIITDSS--IAFHIARVAQEQGAQLVLTGFDRLRL---IQRITDRLPAKAPLLELDVQNE 68
Query: 444 EDRQKLFEHAEKKFGG---IDILVSNAAVNPATG----PVVECPENVWDKIFEVNVKSTF 496
E L + G +D +V + P TG P + P K ++ S
Sbjct: 69 EHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYA 128
Query: 497 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAY---SVSKTALLGLTKAVAQDLASE 553
+ + +LP + P + + AY +V+K+AL + + VA++
Sbjct: 129 SMAKALLPIMNPGGSIVGMD------FDPSRAMPAYNWMTVAKSALESVNRFVAREAGKY 182
Query: 554 NIRVNCLAPGITKTKFAAALYETEEAHEIAVS----------NVPMG---RLAVPDEMGG 600
+R N +A G +T +A+ E P+G + A P +
Sbjct: 183 GVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATP--VAK 240
Query: 601 IVAFLCSDDASYITGEVIVAAGGMQSRL 628
V L SD TG++I A GG +L
Sbjct: 241 TVCALLSDWLPATTGDIIYADGGAHEQL 268
>pdb|2AQH|A Chain A, Crystal Structure Of Isoniazid-Resistant I21v
Enoyl-Acp(Coa) Reductase Mutant Enzyme From
Mycobacterium Tuberculosis In Complex With Nadh
Length = 269
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 102/268 (38%), Gaps = 36/268 (13%)
Query: 384 AVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAKK 443
++T SS + F IA+ +GA +V++ + ++ + K + V +
Sbjct: 14 GIITDSS--VAFHIARVAQEQGAQLVLTGFDRLRL---IQRITDRLPAKAPLLELDVQNE 68
Query: 444 EDRQKLFEHAEKKFGG---IDILVSNAAVNPATG----PVVECPENVWDKIFEVNVKSTF 496
E L + G +D +V + P TG P + P K ++ S
Sbjct: 69 EHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYA 128
Query: 497 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAY---SVSKTALLGLTKAVAQDLASE 553
+ + +LP + P + + AY +V+K+AL + + VA++
Sbjct: 129 SMAKALLPIMNPGGSIVGMD------FDPSRAMPAYNWMTVAKSALESVNRFVAREAGKY 182
Query: 554 NIRVNCLAPGITKTKFAAALYETEEAHEIAVS----------NVPMG---RLAVPDEMGG 600
+R N +A G +T +A+ E P+G + A P +
Sbjct: 183 GVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATP--VAK 240
Query: 601 IVAFLCSDDASYITGEVIVAAGGMQSRL 628
V L SD TG++I A GG ++L
Sbjct: 241 TVCALLSDWLPATTGDIIYADGGAHTQL 268
>pdb|2IE0|A Chain A, Crystal Structure Of Isoniazid-Resistant I21v
Enoyl-Acp(Coa) Reductase Mutant Enzyme From
Mycobacterium Tuberculosis In Complex With Nadh- Inh
Length = 268
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 102/268 (38%), Gaps = 36/268 (13%)
Query: 384 AVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAKK 443
++T SS + F IA+ +GA +V++ + ++ + K + V +
Sbjct: 13 GIITDSS--VAFHIARVAQEQGAQLVLTGFDRLRL---IQRITDRLPAKAPLLELDVQNE 67
Query: 444 EDRQKLFEHAEKKFGG---IDILVSNAAVNPATG----PVVECPENVWDKIFEVNVKSTF 496
E L + G +D +V + P TG P + P K ++ S
Sbjct: 68 EHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYA 127
Query: 497 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAY---SVSKTALLGLTKAVAQDLASE 553
+ + +LP + P + + AY +V+K+AL + + VA++
Sbjct: 128 SMAKALLPIMNPGGSIVGMD------FDPSRAMPAYNWMTVAKSALESVNRFVAREAGKY 181
Query: 554 NIRVNCLAPGITKTKFAAALYETEEAHEIAVS----------NVPMG---RLAVPDEMGG 600
+R N +A G +T +A+ E P+G + A P +
Sbjct: 182 GVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATP--VAK 239
Query: 601 IVAFLCSDDASYITGEVIVAAGGMQSRL 628
V L SD TG++I A GG ++L
Sbjct: 240 TVCALLSDWLPATTGDIIYADGGAHTQL 267
>pdb|2IEB|A Chain A, Crystal Structure Of Isoniazid-Resistant S94a
Enoyl-Acp(Coa) Reductase Mutant Enzyme From
Mycobacterium Tuberculosis In Complex With Nadh- Inh
pdb|2IED|A Chain A, Crystal Structure Of Isoniazid-Resistant S94a
Enoyl-Acp(Coa) Reductase Mutant Enzyme From
Mycobacterium Tuberculosis Uncomplexed
pdb|2IED|B Chain B, Crystal Structure Of Isoniazid-Resistant S94a
Enoyl-Acp(Coa) Reductase Mutant Enzyme From
Mycobacterium Tuberculosis Uncomplexed
pdb|2IED|C Chain C, Crystal Structure Of Isoniazid-Resistant S94a
Enoyl-Acp(Coa) Reductase Mutant Enzyme From
Mycobacterium Tuberculosis Uncomplexed
pdb|2IED|D Chain D, Crystal Structure Of Isoniazid-Resistant S94a
Enoyl-Acp(Coa) Reductase Mutant Enzyme From
Mycobacterium Tuberculosis Uncomplexed
Length = 268
Score = 29.6 bits (65), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 101/268 (37%), Gaps = 36/268 (13%)
Query: 384 AVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAKK 443
++T SS I F IA+ +GA +V++ + ++ + K + V +
Sbjct: 13 GIITDSS--IAFHIARVAQEQGAQLVLTGFDRLRL---IQRITDRLPAKAPLLELDVQNE 67
Query: 444 EDRQKLFEHAEKKFGG---IDILVSNAAVNPATG----PVVECPENVWDKIFEVNVKSTF 496
E L + G +D +V P TG P + P K ++ S
Sbjct: 68 EHLASLAGRVTEAIGAGNKLDGVVHAIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYA 127
Query: 497 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAY---SVSKTALLGLTKAVAQDLASE 553
+ + +LP + P + + AY +V+K+AL + + VA++
Sbjct: 128 SMAKALLPIMNPGGSIVGMD------FDPSRAMPAYNWMTVAKSALESVNRFVAREAGKY 181
Query: 554 NIRVNCLAPGITKTKFAAALYETEEAHEIAVS----------NVPMG---RLAVPDEMGG 600
+R N +A G +T +A+ E P+G + A P +
Sbjct: 182 GVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATP--VAK 239
Query: 601 IVAFLCSDDASYITGEVIVAAGGMQSRL 628
V L SD TG++I A GG ++L
Sbjct: 240 TVCALLSDWLPATTGDIIYADGGAHTQL 267
>pdb|2NV6|A Chain A, Mycobacterium Tuberculosis Inha (S94a) Bound With Inh-Nad
Adduct
pdb|1ENZ|A Chain A, Crystal Structure And Function Of The Isoniazid Target Of
Mycobacterium Tuberculosis
Length = 268
Score = 29.6 bits (65), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 101/267 (37%), Gaps = 36/267 (13%)
Query: 385 VVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAKKE 444
++T SS I F IA+ +GA +V++ + ++ + K + V +E
Sbjct: 14 IITDSS--IAFHIARVAQEQGAQLVLTGFDRLRL---IQRITDRLPAKAPLLELDVQNEE 68
Query: 445 DRQKLFEHAEKKFGG---IDILVSNAAVNPATG----PVVECPENVWDKIFEVNVKSTFL 497
L + G +D +V P TG P + P K ++ S
Sbjct: 69 HLASLAGRVTEAIGAGNKLDGVVHAIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYAS 128
Query: 498 LTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAY---SVSKTALLGLTKAVAQDLASEN 554
+ + +LP + P + + AY +V+K+AL + + VA++
Sbjct: 129 MAKALLPIMNPGGSIVGMD------FDPSRAMPAYNWMTVAKSALESVNRFVAREAGKYG 182
Query: 555 IRVNCLAPGITKTKFAAALYETEEAHEIAVS----------NVPMG---RLAVPDEMGGI 601
+R N +A G +T +A+ E P+G + A P +
Sbjct: 183 VRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATP--VAKT 240
Query: 602 VAFLCSDDASYITGEVIVAAGGMQSRL 628
V L SD TG++I A GG ++L
Sbjct: 241 VCALLSDWLPATTGDIIYADGGAHTQL 267
>pdb|2AQI|A Chain A, Crystal Structure Of Isoniazid-Resistant I47t
Enoyl-Acp(Coa) Reductase Mutant Enzyme From
Mycobacterium Tuberculosis In Complex With Nadh
Length = 269
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 101/268 (37%), Gaps = 36/268 (13%)
Query: 384 AVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAKK 443
++T SS I F IA+ +GA +V++ + + + K + V +
Sbjct: 14 GIITDSS--IAFHIARVAQEQGAQLVLTGFDRLRLTQRITDRLPA---KAPLLELDVQNE 68
Query: 444 EDRQKLFEHAEKKFGG---IDILVSNAAVNPATG----PVVECPENVWDKIFEVNVKSTF 496
E L + G +D +V + P TG P + P K ++ S
Sbjct: 69 EHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYA 128
Query: 497 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAY---SVSKTALLGLTKAVAQDLASE 553
+ + +LP + P + + AY +V+K+AL + + VA++
Sbjct: 129 SMAKALLPIMNPGGSIVGMD------FDPSRAMPAYNWMTVAKSALESVNRFVAREAGKY 182
Query: 554 NIRVNCLAPGITKTKFAAALYETEEAHEIAVS----------NVPMG---RLAVPDEMGG 600
+R N +A G +T +A+ E P+G + A P +
Sbjct: 183 GVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATP--VAK 240
Query: 601 IVAFLCSDDASYITGEVIVAAGGMQSRL 628
V L SD TG++I A GG ++L
Sbjct: 241 TVCALLSDWLPATTGDIIYADGGAHTQL 268
>pdb|2AQK|A Chain A, Crystal Structure Of Isoniazid-Resistant S94a
Enoyl-Acp(Coa) Reductase Mutant Enzyme From
Mycobacterium Tuberculosis In Complex With Nadh
pdb|4DTI|A Chain A, Mycobacterium Tuberculosis Inha-S94a Mutant In Complex
With Nadh
Length = 269
Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 101/268 (37%), Gaps = 36/268 (13%)
Query: 384 AVVTASSDGIGFAIAKRLSTEGASVVISSRKESNVNKAVETLQKEGHQKISGVVCHVAKK 443
++T SS I F IA+ +GA +V++ + ++ + K + V +
Sbjct: 14 GIITDSS--IAFHIARVAQEQGAQLVLTGFDRLRL---IQRITDRLPAKAPLLELDVQNE 68
Query: 444 EDRQKLFEHAEKKFGG---IDILVSNAAVNPATG----PVVECPENVWDKIFEVNVKSTF 496
E L + G +D +V P TG P + P K ++ S
Sbjct: 69 EHLASLAGRVTEAIGAGNKLDGVVHAIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYA 128
Query: 497 LLTQEVLPYIRKRNXXXXXXXXXXXXLAPFKLLGAY---SVSKTALLGLTKAVAQDLASE 553
+ + +LP + P + + AY +V+K+AL + + VA++
Sbjct: 129 SMAKALLPIMNPGGSIVGMD------FDPSRAMPAYNWMTVAKSALESVNRFVAREAGKY 182
Query: 554 NIRVNCLAPGITKTKFAAALYETEEAHEIAVS----------NVPMG---RLAVPDEMGG 600
+R N +A G +T +A+ E P+G + A P +
Sbjct: 183 GVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATP--VAK 240
Query: 601 IVAFLCSDDASYITGEVIVAAGGMQSRL 628
V L SD TG++I A GG ++L
Sbjct: 241 TVCALLSDWLPATTGDIIYADGGAHTQL 268
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.131 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,415,197
Number of Sequences: 62578
Number of extensions: 745803
Number of successful extensions: 4425
Number of sequences better than 100.0: 369
Number of HSP's better than 100.0 without gapping: 321
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 2141
Number of HSP's gapped (non-prelim): 1168
length of query: 762
length of database: 14,973,337
effective HSP length: 106
effective length of query: 656
effective length of database: 8,340,069
effective search space: 5471085264
effective search space used: 5471085264
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)