Your job contains 1 sequence.
>psy9422
MPSGCLPLKSLLLLICFESWQQEHVKFKTEVGPGTPNFKDRRVLIQGTQNFKVHQNRTRQ
EHVKLCERLKSTPPGPADRKLWISMTANGKYFHVGKRSLFKGHHQFNIHQRHLTAFSIVL
NMNMGIVRRSEERRVGEEGRLLNMNMGIVRSATGRQVLLALTSLLVDIAGYYKVLGKGRI
PKQPVIVKAKFFSKLAEEKIKAVGGACVLTA
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy9422
(211 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-030131-8670 - symbol:zgc:77235 "zgc:77235" ... 197 9.8e-16 1
UNIPROTKB|E9PJD9 - symbol:RPL27A "60S ribosomal protein L... 194 2.0e-15 1
UNIPROTKB|E9PLX7 - symbol:RPL27A "60S ribosomal protein L... 194 2.0e-15 1
UNIPROTKB|P46776 - symbol:RPL27A "60S ribosomal protein L... 194 2.0e-15 1
UNIPROTKB|G1K1B4 - symbol:RPL27A "60S ribosomal protein L... 193 2.6e-15 1
UNIPROTKB|G3MWX5 - symbol:G3MWX5 "Uncharacterized protein... 193 2.6e-15 1
UNIPROTKB|Q56K03 - symbol:RPL27A "60S ribosomal protein L... 193 2.6e-15 1
UNIPROTKB|E2RI34 - symbol:RPL27A "Uncharacterized protein... 193 2.6e-15 1
UNIPROTKB|F1RGC0 - symbol:LOC100739437 "Uncharacterized p... 193 2.6e-15 1
RGD|1309771 - symbol:Rpl27a "ribosomal protein L27a" spec... 193 2.6e-15 1
RGD|1562402 - symbol:RGD1562402 "similar to 60S ribosomal... 193 2.6e-15 1
UNIPROTKB|F1NBX4 - symbol:RPL27A "Uncharacterized protein... 191 4.2e-15 1
UNIPROTKB|F1Q0S5 - symbol:RPL27A "Uncharacterized protein... 189 6.9e-15 1
UNIPROTKB|I3LK51 - symbol:I3LK51 "Uncharacterized protein... 189 6.9e-15 1
UNIPROTKB|F1LVD0 - symbol:F1LVD0 "Uncharacterized protein... 189 6.9e-15 1
UNIPROTKB|E1BE42 - symbol:E1BE42 "Uncharacterized protein... 188 8.8e-15 1
UNIPROTKB|F1PWI8 - symbol:LOC100685993 "Uncharacterized p... 188 8.8e-15 1
RGD|1561984 - symbol:RGD1561984 "similar to ribosomal pro... 187 1.1e-14 1
RGD|1561360 - symbol:RGD1561360 "similar to ribosomal pro... 182 3.8e-14 1
RGD|1559972 - symbol:RGD1559972 "similar to ribosomal pro... 181 4.9e-14 1
RGD|1565415 - symbol:RGD1565415 "similar to ribosomal pro... 177 1.3e-13 1
UNIPROTKB|F1M5H4 - symbol:F1M5H4 "Uncharacterized protein... 176 1.6e-13 1
DICTYBASE|DDB_G0292388 - symbol:rpl27a "S60 ribosomal pro... 168 1.2e-12 1
FB|FBgn0261606 - symbol:RpL27A "Ribosomal protein L27A" s... 158 1.3e-11 1
WB|WBGene00021350 - symbol:Y37E3.8 species:6239 "Caenorha... 153 4.5e-11 1
UNIPROTKB|J9NXP9 - symbol:J9NXP9 "Uncharacterized protein... 152 5.8e-11 1
UNIPROTKB|F1LZW1 - symbol:F1LZW1 "Uncharacterized protein... 151 7.4e-11 1
SGD|S000003071 - symbol:RPL28 "Ribosomal 60S subunit prot... 151 7.4e-11 1
GENEDB_PFALCIPARUM|PFF0885w - symbol:PFF0885w "60S riboso... 147 2.0e-10 1
UNIPROTKB|C6KT23 - symbol:PFF0885w "60S ribosomal protein... 147 2.0e-10 1
TAIR|locus:2028080 - symbol:RPL27AB species:3702 "Arabido... 139 1.4e-09 1
TAIR|locus:2033637 - symbol:AT1G70600 species:3702 "Arabi... 139 1.4e-09 1
UNIPROTKB|F1PIL3 - symbol:F1PIL3 "Uncharacterized protein... 135 3.6e-09 1
ASPGD|ASPL0000039794 - symbol:AN10416 species:162425 "Eme... 127 2.6e-08 1
POMBASE|SPCC5E4.07 - symbol:rpl2802 "60S ribosomal protei... 126 3.3e-08 1
POMBASE|SPBC776.11 - symbol:rpl2801 "60S ribosomal protei... 123 6.8e-08 1
UNIPROTKB|G4ML84 - symbol:MGG_06721 "60S ribosomal protei... 122 8.7e-08 1
RGD|1565679 - symbol:RGD1565679 "similar to 60S ribosomal... 117 2.9e-07 1
UNIPROTKB|F1LVX4 - symbol:F1LVX4 "Uncharacterized protein... 117 2.9e-07 1
UNIPROTKB|F1M730 - symbol:F1M730 "Uncharacterized protein... 111 1.4e-06 1
TAIR|locus:2010406 - symbol:AT1G12960 "AT1G12960" species... 97 6.5e-05 1
UNIPROTKB|F1M3C2 - symbol:F1M3C2 "Uncharacterized protein... 98 0.00060 1
>ZFIN|ZDB-GENE-030131-8670 [details] [associations]
symbol:zgc:77235 "zgc:77235" species:7955 "Danio
rerio" [GO:0005622 "intracellular" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR001196 PROSITE:PS00475 Pfam:PF00828
ZFIN:ZDB-GENE-030131-8670 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
eggNOG:COG0200 KO:K02900 InterPro:IPR021131 SUPFAM:SSF52080
HOVERGEN:HBG054587 OrthoDB:EOG4CJVJC EMBL:BC064441 IPI:IPI00497691
RefSeq:NP_956324.1 UniGene:Dr.75969 ProteinModelPortal:Q6P2M0
SMR:Q6P2M0 STRING:Q6P2M0 PRIDE:Q6P2M0 GeneID:336726 KEGG:dre:336726
InParanoid:Q6P2M0 NextBio:20811875 ArrayExpress:Q6P2M0
Uniprot:Q6P2M0
Length = 148
Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 38/49 (77%), Positives = 45/49 (91%)
Query: 165 LVDI--AGYYKVLGKGRIPKQPVIVKAKFFSKLAEEKIKAVGGACVLTA 211
++D+ AGY+KVLGKG++PKQPVIVKAKFFS+ AEEKIK VGGACVLTA
Sbjct: 100 IIDVVRAGYFKVLGKGKLPKQPVIVKAKFFSRRAEEKIKGVGGACVLTA 148
>UNIPROTKB|E9PJD9 [details] [associations]
symbol:RPL27A "60S ribosomal protein L27a" species:9606
"Homo sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR001196 PROSITE:PS00475
Pfam:PF00828 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR021131 SUPFAM:SSF52080 HGNC:HGNC:10329 EMBL:AC091053
IPI:IPI00980350 SMR:E9PJD9 Ensembl:ENST00000524496
Ensembl:ENST00000526562 Ensembl:ENST00000530022
Ensembl:ENST00000530913 Uniprot:E9PJD9
Length = 91
Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 37/49 (75%), Positives = 45/49 (91%)
Query: 165 LVDI--AGYYKVLGKGRIPKQPVIVKAKFFSKLAEEKIKAVGGACVLTA 211
++D+ +GYYKVLGKG++PKQPVIVKAKFFS+ AEEKIK+VGGACVL A
Sbjct: 43 IIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKSVGGACVLVA 91
>UNIPROTKB|E9PLX7 [details] [associations]
symbol:RPL27A "60S ribosomal protein L27a" species:9606
"Homo sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR001196 PROSITE:PS00475
Pfam:PF00828 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR021131 SUPFAM:SSF52080 HGNC:HGNC:10329 EMBL:AC091053
IPI:IPI00976934 ProteinModelPortal:E9PLX7 SMR:E9PLX7
Ensembl:ENST00000532359 ArrayExpress:E9PLX7 Bgee:E9PLX7
Uniprot:E9PLX7
Length = 113
Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 37/49 (75%), Positives = 45/49 (91%)
Query: 165 LVDI--AGYYKVLGKGRIPKQPVIVKAKFFSKLAEEKIKAVGGACVLTA 211
++D+ +GYYKVLGKG++PKQPVIVKAKFFS+ AEEKIK+VGGACVL A
Sbjct: 65 IIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKSVGGACVLVA 113
>UNIPROTKB|P46776 [details] [associations]
symbol:RPL27A "60S ribosomal protein L27a" species:9606
"Homo sapiens" [GO:0006412 "translation" evidence=NAS;TAS]
[GO:0003735 "structural constituent of ribosome" evidence=NAS]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IDA]
[GO:0003723 "RNA binding" evidence=TAS] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006413 "translational initiation" evidence=TAS] [GO:0006414
"translational elongation" evidence=TAS] [GO:0006415 "translational
termination" evidence=TAS] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0019058 "viral infectious cycle" evidence=TAS] [GO:0019083
"viral transcription" evidence=TAS] [GO:0044267 "cellular protein
metabolic process" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_17015 InterPro:IPR001196 PROSITE:PS00475
Pfam:PF00828 Reactome:REACT_116125 EMBL:CH471064 GO:GO:0000184
GO:GO:0006413 GO:GO:0003723 GO:GO:0003735 GO:GO:0006415
GO:GO:0006414 Reactome:REACT_1762 GO:GO:0006614 GO:GO:0022625
GO:GO:0019083 eggNOG:COG0200 HOGENOM:HOG000231263 KO:K02900
InterPro:IPR021131 SUPFAM:SSF52080 OMA:HHRINRD CTD:6157
HOVERGEN:HBG054587 OrthoDB:EOG4CJVJC EMBL:U14968 EMBL:AB020236
EMBL:AK311767 EMBL:BC005326 EMBL:BC020169 EMBL:AB007178
IPI:IPI00456758 PIR:S55914 RefSeq:NP_000981.1 UniGene:Hs.523463
ProteinModelPortal:P46776 SMR:P46776 IntAct:P46776
MINT:MINT-1150308 STRING:P46776 PhosphoSite:P46776 DMDM:1173017
SWISS-2DPAGE:P46776 PaxDb:P46776 PRIDE:P46776
Ensembl:ENST00000314138 GeneID:6157 KEGG:hsa:6157 UCSC:uc001mgs.4
GeneCards:GC11P008703 HGNC:HGNC:10329 MIM:603637 neXtProt:NX_P46776
PharmGKB:PA34708 InParanoid:P46776 PhylomeDB:P46776 GenomeRNAi:6157
NextBio:23911 ArrayExpress:P46776 Bgee:P46776 CleanEx:HS_RPL27A
Genevestigator:P46776 GermOnline:ENSG00000166441 Uniprot:P46776
Length = 148
Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 37/49 (75%), Positives = 45/49 (91%)
Query: 165 LVDI--AGYYKVLGKGRIPKQPVIVKAKFFSKLAEEKIKAVGGACVLTA 211
++D+ +GYYKVLGKG++PKQPVIVKAKFFS+ AEEKIK+VGGACVL A
Sbjct: 100 IIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKSVGGACVLVA 148
>UNIPROTKB|G1K1B4 [details] [associations]
symbol:RPL27A "60S ribosomal protein L27a" species:9913
"Bos taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001196 PROSITE:PS00475
Pfam:PF00828 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR021131 SUPFAM:SSF52080 OMA:HHRINRD UniGene:Bt.23343
GeneTree:ENSGT00390000005534 NextBio:20817618 EMBL:DAAA02040745
PRIDE:G1K1B4 Ensembl:ENSBTAT00000007036 Uniprot:G1K1B4
Length = 147
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 37/49 (75%), Positives = 44/49 (89%)
Query: 165 LVDI--AGYYKVLGKGRIPKQPVIVKAKFFSKLAEEKIKAVGGACVLTA 211
++D+ +GYYKVLGKG++PKQPVIVKAKFFS+ AEEKIK VGGACVL A
Sbjct: 99 IIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKGVGGACVLVA 147
>UNIPROTKB|G3MWX5 [details] [associations]
symbol:G3MWX5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001196 PROSITE:PS00475
Pfam:PF00828 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR021131 SUPFAM:SSF52080 OMA:FCPTINL
GeneTree:ENSGT00390000005534 EMBL:DAAA02014587
Ensembl:ENSBTAT00000026400 NextBio:20925035 Uniprot:G3MWX5
Length = 148
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 37/49 (75%), Positives = 44/49 (89%)
Query: 165 LVDI--AGYYKVLGKGRIPKQPVIVKAKFFSKLAEEKIKAVGGACVLTA 211
++D+ +GYYKVLGKG++PKQPVIVKAKFFS+ AEEKIK VGGACVL A
Sbjct: 100 IIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKGVGGACVLVA 148
>UNIPROTKB|Q56K03 [details] [associations]
symbol:RPL27A "60S ribosomal protein L27a" species:9913
"Bos taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001196 PROSITE:PS00475
Pfam:PF00828 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
eggNOG:COG0200 HOGENOM:HOG000231263 KO:K02900 InterPro:IPR021131
SUPFAM:SSF52080 OMA:HHRINRD EMBL:AY911324 EMBL:BC109683
IPI:IPI00694444 RefSeq:NP_001019642.1 UniGene:Bt.23343
ProteinModelPortal:Q56K03 SMR:Q56K03 STRING:Q56K03 PRIDE:Q56K03
Ensembl:ENSBTAT00000025126 GeneID:404190 KEGG:bta:404190 CTD:6157
GeneTree:ENSGT00390000005534 HOVERGEN:HBG054587 OrthoDB:EOG4CJVJC
NextBio:20817618 ArrayExpress:Q56K03 Uniprot:Q56K03
Length = 148
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 37/49 (75%), Positives = 44/49 (89%)
Query: 165 LVDI--AGYYKVLGKGRIPKQPVIVKAKFFSKLAEEKIKAVGGACVLTA 211
++D+ +GYYKVLGKG++PKQPVIVKAKFFS+ AEEKIK VGGACVL A
Sbjct: 100 IIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKGVGGACVLVA 148
>UNIPROTKB|E2RI34 [details] [associations]
symbol:RPL27A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001196 PROSITE:PS00475
Pfam:PF00828 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 KO:K02900
InterPro:IPR021131 SUPFAM:SSF52080 OMA:HHRINRD CTD:6157
GeneTree:ENSGT00390000005534 EMBL:AAEX03013985 EMBL:AAEX03012891
RefSeq:NP_001239154.1 UniGene:Cfa.40197 SMR:E2RI34
Ensembl:ENSCAFT00000011134 Ensembl:ENSCAFT00000017254 GeneID:611398
KEGG:cfa:611398 NextBio:20852440 Uniprot:E2RI34
Length = 148
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 37/49 (75%), Positives = 44/49 (89%)
Query: 165 LVDI--AGYYKVLGKGRIPKQPVIVKAKFFSKLAEEKIKAVGGACVLTA 211
++D+ +GYYKVLGKG++PKQPVIVKAKFFS+ AEEKIK VGGACVL A
Sbjct: 100 IIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKGVGGACVLVA 148
>UNIPROTKB|F1RGC0 [details] [associations]
symbol:LOC100739437 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001196 PROSITE:PS00475
Pfam:PF00828 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR021131 SUPFAM:SSF52080 OMA:FCPTINL
GeneTree:ENSGT00390000005534 EMBL:FP312755
Ensembl:ENSSSCT00000015919 Uniprot:F1RGC0
Length = 148
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 37/49 (75%), Positives = 44/49 (89%)
Query: 165 LVDI--AGYYKVLGKGRIPKQPVIVKAKFFSKLAEEKIKAVGGACVLTA 211
++D+ +GYYKVLGKG++PKQPVIVKAKFFS+ AEEKIK VGGACVL A
Sbjct: 100 IIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKGVGGACVLVA 148
>RGD|1309771 [details] [associations]
symbol:Rpl27a "ribosomal protein L27a" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA;ISO] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA;ISO] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=ISO] [GO:0022626 "cytosolic ribosome"
evidence=ISO] InterPro:IPR001196 PROSITE:PS00475 RGD:1309771
Pfam:PF00828 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
eggNOG:COG0200 HOGENOM:HOG000231263 KO:K02900 InterPro:IPR021131
SUPFAM:SSF52080 CTD:6157 GeneTree:ENSGT00390000005534
HOVERGEN:HBG054587 OrthoDB:EOG4CJVJC EMBL:X52733 IPI:IPI00371209
PIR:S13071 RefSeq:NP_001099760.1 UniGene:Rn.224527 UniGene:Rn.2722
ProteinModelPortal:P18445 SMR:P18445 STRING:P18445
PhosphoSite:P18445 PRIDE:P18445 Ensembl:ENSRNOT00000019247
GeneID:293418 KEGG:rno:293418 UCSC:RGD:1309771 InParanoid:P18445
NextBio:636059 Genevestigator:P18445 GermOnline:ENSRNOG00000014214
Uniprot:P18445
Length = 148
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 37/49 (75%), Positives = 44/49 (89%)
Query: 165 LVDI--AGYYKVLGKGRIPKQPVIVKAKFFSKLAEEKIKAVGGACVLTA 211
++D+ +GYYKVLGKG++PKQPVIVKAKFFS+ AEEKIK VGGACVL A
Sbjct: 100 IIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKGVGGACVLVA 148
>RGD|1562402 [details] [associations]
symbol:RGD1562402 "similar to 60S ribosomal protein L27a"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001196 PROSITE:PS00475 RGD:1562402 Pfam:PF00828
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR021131
SUPFAM:SSF52080 GeneTree:ENSGT00390000005534 OrthoDB:EOG4CJVJC
OMA:ACVLLKP IPI:IPI00560893 RefSeq:XP_001079874.1
RefSeq:XP_574425.1 PRIDE:D3ZF07 Ensembl:ENSRNOT00000045301
GeneID:499133 KEGG:rno:499133 UCSC:RGD:1562402 CTD:499133
NextBio:701943 Uniprot:D3ZF07
Length = 148
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 37/49 (75%), Positives = 44/49 (89%)
Query: 165 LVDI--AGYYKVLGKGRIPKQPVIVKAKFFSKLAEEKIKAVGGACVLTA 211
++D+ +GYYKVLGKG++PKQPVIVKAKFFS+ AEEKIK VGGACVL A
Sbjct: 100 IIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKGVGGACVLVA 148
>UNIPROTKB|F1NBX4 [details] [associations]
symbol:RPL27A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IEA]
InterPro:IPR001196 PROSITE:PS00475 Pfam:PF00828 GO:GO:0006412
GO:GO:0003735 GO:GO:0022625 InterPro:IPR021131 SUPFAM:SSF52080
OMA:FCPTINL GeneTree:ENSGT00390000005534 EMBL:AADN02030565
IPI:IPI00587714 Ensembl:ENSGALT00000009566 Uniprot:F1NBX4
Length = 148
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 37/49 (75%), Positives = 44/49 (89%)
Query: 165 LVDI--AGYYKVLGKGRIPKQPVIVKAKFFSKLAEEKIKAVGGACVLTA 211
++D+ +GYYKVLGKG++PKQPVIVKAKFFS+ AEEKIK VGGACVL A
Sbjct: 100 VIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKEVGGACVLVA 148
>UNIPROTKB|F1Q0S5 [details] [associations]
symbol:RPL27A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001196 PROSITE:PS00475
Pfam:PF00828 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR021131 SUPFAM:SSF52080 GeneTree:ENSGT00390000005534
OMA:ACVLLKP EMBL:AAEX03012891 Ensembl:ENSCAFT00000017640
Uniprot:F1Q0S5
Length = 164
Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 36/47 (76%), Positives = 43/47 (91%)
Query: 165 LVDI--AGYYKVLGKGRIPKQPVIVKAKFFSKLAEEKIKAVGGACVL 209
++D+ +GYYKVLGKG++PKQPVIVKAKFFS+ AEEKIK VGGACVL
Sbjct: 107 IIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKGVGGACVL 153
>UNIPROTKB|I3LK51 [details] [associations]
symbol:I3LK51 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR001196 PROSITE:PS00475 Pfam:PF00828 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR021131 SUPFAM:SSF52080
GeneTree:ENSGT00390000005534 OMA:ACVLLKP EMBL:FP102759
Ensembl:ENSSSCT00000026597 Uniprot:I3LK51
Length = 163
Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 36/47 (76%), Positives = 43/47 (91%)
Query: 165 LVDI--AGYYKVLGKGRIPKQPVIVKAKFFSKLAEEKIKAVGGACVL 209
++D+ +GYYKVLGKG++PKQPVIVKAKFFS+ AEEKIK VGGACVL
Sbjct: 106 IIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKGVGGACVL 152
>UNIPROTKB|F1LVD0 [details] [associations]
symbol:F1LVD0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005840 "ribosome" evidence=IEA]
Pfam:PF00828 GO:GO:0005840 InterPro:IPR021131 SUPFAM:SSF52080
GeneTree:ENSGT00390000005534 IPI:IPI00366608
Ensembl:ENSRNOT00000033738 Uniprot:F1LVD0
Length = 136
Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 37/52 (71%), Positives = 44/52 (84%)
Query: 160 ALTSLLVDIAGYYKVLGKGRIPKQPVIVKAKFFSKLAEEKIKAVGGACVLTA 211
A ++ V ++GYYKVLGKG+ PKQPVI+KAKFFS+ AEEKIK VGGACVL A
Sbjct: 85 AAPTIDVVLSGYYKVLGKGKFPKQPVIMKAKFFSRRAEEKIKGVGGACVLVA 136
>UNIPROTKB|E1BE42 [details] [associations]
symbol:E1BE42 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] Pfam:PF00828 GO:GO:0005840 InterPro:IPR021131
SUPFAM:SSF52080 GeneTree:ENSGT00390000005534 OMA:ACVLLKP
EMBL:DAAA02007126 IPI:IPI00823813 Ensembl:ENSBTAT00000028851
NextBio:20928048 Uniprot:E1BE42
Length = 148
Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 36/49 (73%), Positives = 43/49 (87%)
Query: 165 LVDI--AGYYKVLGKGRIPKQPVIVKAKFFSKLAEEKIKAVGGACVLTA 211
++D+ +GYYKVLGKG++PKQPVIVKAKFFS+ AEEK K VGGACVL A
Sbjct: 100 IIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKTKGVGGACVLVA 148
>UNIPROTKB|F1PWI8 [details] [associations]
symbol:LOC100685993 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005840 "ribosome" evidence=IEA]
Pfam:PF00828 GO:GO:0005840 InterPro:IPR021131 SUPFAM:SSF52080
GeneTree:ENSGT00390000005534 EMBL:AAEX03017148
Ensembl:ENSCAFT00000016285 OMA:SRREEKI Uniprot:F1PWI8
Length = 149
Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 37/49 (75%), Positives = 43/49 (87%)
Query: 165 LVDI--AGYYKVLGKGRIPKQPVIVKAKFFSKLAEEKIKAVGGACVLTA 211
++D+ +GYYKVLGKG+ PKQPVIVKAKFFS+ AEEKIK VGGACVL A
Sbjct: 101 IIDVVRSGYYKVLGKGKHPKQPVIVKAKFFSRRAEEKIKGVGGACVLVA 149
>RGD|1561984 [details] [associations]
symbol:RGD1561984 "similar to ribosomal protein L27a"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001196 PROSITE:PS00475 RGD:1561984 Pfam:PF00828
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR021131
SUPFAM:SSF52080 GeneTree:ENSGT00390000005534 OrthoDB:EOG4CJVJC
IPI:IPI00366149 RefSeq:XP_001071033.1 RefSeq:XP_236218.1
Ensembl:ENSRNOT00000041555 GeneID:315642 KEGG:rno:315642
UCSC:RGD:1561984 CTD:315642 OMA:HHYRINS NextBio:669550
Uniprot:D3ZI60
Length = 148
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 35/49 (71%), Positives = 44/49 (89%)
Query: 165 LVDI--AGYYKVLGKGRIPKQPVIVKAKFFSKLAEEKIKAVGGACVLTA 211
++D+ +GYYKVLGKG++PKQPV+VKAKFFS+ AEEK+K VGGACVL A
Sbjct: 100 IIDVVRSGYYKVLGKGKLPKQPVMVKAKFFSRRAEEKMKGVGGACVLVA 148
>RGD|1561360 [details] [associations]
symbol:RGD1561360 "similar to ribosomal protein L27a"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001196 PROSITE:PS00475 RGD:1561360 Pfam:PF00828
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR021131
SUPFAM:SSF52080 OrthoDB:EOG4CJVJC IPI:IPI00369933
Ensembl:ENSRNOT00000031606 NextBio:651011 Uniprot:D3ZUK0
Length = 147
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 35/49 (71%), Positives = 42/49 (85%)
Query: 165 LVDI--AGYYKVLGKGRIPKQPVIVKAKFFSKLAEEKIKAVGGACVLTA 211
++D+ +GYYKVLGKG++PKQPVIVK KFFS+ AE KIK VGGACVL A
Sbjct: 99 IIDVVQSGYYKVLGKGKLPKQPVIVKTKFFSRRAEVKIKGVGGACVLVA 147
>RGD|1559972 [details] [associations]
symbol:RGD1559972 "similar to ribosomal protein L27a"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] InterPro:IPR001196 PROSITE:PS00475 RGD:1559972
Pfam:PF00828 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR021131 SUPFAM:SSF52080 GeneTree:ENSGT00390000005534
OrthoDB:EOG4CJVJC IPI:IPI00358600 PRIDE:D4AAY6
Ensembl:ENSRNOT00000041326 UCSC:RGD:1559972 Uniprot:D4AAY6
Length = 148
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 34/45 (75%), Positives = 41/45 (91%)
Query: 165 LVDI--AGYYKVLGKGRIPKQPVIVKAKFFSKLAEEKIKAVGGAC 207
++D+ +GYYKVLGKG++PKQPVIVKAKFFS+ AEEKIK VGGAC
Sbjct: 100 IIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKGVGGAC 144
>RGD|1565415 [details] [associations]
symbol:RGD1565415 "similar to ribosomal protein L27a"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001196 PROSITE:PS00475 RGD:1565415 Pfam:PF00828
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR021131
SUPFAM:SSF52080 GeneTree:ENSGT00390000005534 OrthoDB:EOG4CJVJC
IPI:IPI00554298 RefSeq:XP_001057231.1 RefSeq:XP_575475.1
Ensembl:ENSRNOT00000041621 GeneID:500123 KEGG:rno:500123
UCSC:RGD:1565415 CTD:500123 OMA:SHGHCRI NextBio:705163
Uniprot:D3ZG03
Length = 148
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 34/49 (69%), Positives = 43/49 (87%)
Query: 165 LVDI--AGYYKVLGKGRIPKQPVIVKAKFFSKLAEEKIKAVGGACVLTA 211
++D+ +GY +VLGKG++PKQPVIVKAKFFS+ AEEK+K VGGACVL A
Sbjct: 100 IIDVVRSGYCRVLGKGKLPKQPVIVKAKFFSRRAEEKMKGVGGACVLMA 148
>UNIPROTKB|F1M5H4 [details] [associations]
symbol:F1M5H4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005840 "ribosome" evidence=IEA]
Pfam:PF00828 GO:GO:0005840 InterPro:IPR021131 SUPFAM:SSF52080
GeneTree:ENSGT00390000005534 IPI:IPI00947741
Ensembl:ENSRNOT00000046786 Uniprot:F1M5H4
Length = 146
Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 35/47 (74%), Positives = 41/47 (87%)
Query: 165 LVDI--AGYYKVLGKGRIPKQPVIVKAKFFSKLAEEKIKAVGGACVL 209
+ DI +GYYKVL KG++PKQPVIVKAKFFS+ AEEK+K VGGACVL
Sbjct: 100 ITDIVRSGYYKVLRKGKLPKQPVIVKAKFFSRRAEEKMKGVGGACVL 146
>DICTYBASE|DDB_G0292388 [details] [associations]
symbol:rpl27a "S60 ribosomal protein L27a"
species:44689 "Dictyostelium discoideum" [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0005840 "ribosome" evidence=IEA;ISS]
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001196 PROSITE:PS00475
dictyBase:DDB_G0292388 Pfam:PF00828 GenomeReviews:CM000155_GR
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:AAFI02000190
eggNOG:COG0200 KO:K02900 InterPro:IPR021131 SUPFAM:SSF52080
OMA:FCPTINL EMBL:D50338 PIR:JE0320 RefSeq:XP_629601.1
ProteinModelPortal:P48160 SMR:P48160 STRING:P48160 PRIDE:P48160
EnsemblProtists:DDB0201638 GeneID:8628661 KEGG:ddi:DDB_G0292388
ProtClustDB:PTZ00160 Uniprot:P48160
Length = 148
Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 32/52 (61%), Positives = 44/52 (84%)
Query: 162 TSLLVDIA--GYYKVLGKGRIPKQPVIVKAKFFSKLAEEKIKAVGGACVLTA 211
T+ +VD+ G++KVLG G +P QP+IVKA++FSK+AE+KIKAVGGAC+L A
Sbjct: 97 TAPVVDVTQKGFFKVLGHGILPTQPIIVKARYFSKVAEKKIKAVGGACILVA 148
>FB|FBgn0261606 [details] [associations]
symbol:RpL27A "Ribosomal protein L27A" species:7227
"Drosophila melanogaster" [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISS;NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISS;IDA;NAS] [GO:0006412 "translation"
evidence=ISS;NAS] [GO:0005840 "ribosome" evidence=IDA;NAS]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0000022 "mitotic spindle elongation" evidence=IMP] [GO:0051298
"centrosome duplication" evidence=IMP] InterPro:IPR001196
PROSITE:PS00475 Pfam:PF00828 EMBL:AE014134 GO:GO:0051298
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0000022
eggNOG:COG0200 KO:K02900 InterPro:IPR021131 SUPFAM:SSF52080
CTD:6157 GeneTree:ENSGT00390000005534 EMBL:X74484 EMBL:U66357
EMBL:U66358 EMBL:AY071144 PIR:JC2392 PIR:JC6202 RefSeq:NP_476963.1
UniGene:Dm.295 ProteinModelPortal:P41092 SMR:P41092 DIP:DIP-18398N
MINT:MINT-874607 STRING:P41092 PaxDb:P41092
EnsemblMetazoa:FBtr0077452 GeneID:33654 KEGG:dme:Dmel_CG15442
FlyBase:FBgn0261606 InParanoid:P41092 OMA:HHHRTNL OrthoDB:EOG48W9JC
PhylomeDB:P41092 ChiTaRS:RPL27A GenomeRNAi:33654 NextBio:784636
GermOnline:CG15442 Uniprot:P41092
Length = 149
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 29/49 (59%), Positives = 40/49 (81%)
Query: 165 LVDIA--GYYKVLGKGRIPKQPVIVKAKFFSKLAEEKIKAVGGACVLTA 211
++D+ GYYK+LG+G +P +PVIVKAK+FSK AE+KIK GG C+L+A
Sbjct: 101 VIDLVKFGYYKLLGRGHLPARPVIVKAKYFSKKAEDKIKKAGGVCLLSA 149
>WB|WBGene00021350 [details] [associations]
symbol:Y37E3.8 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
InterPro:IPR001196 PROSITE:PS00475 Pfam:PF00828 GO:GO:0009792
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:FO081769
eggNOG:COG0200 HOGENOM:HOG000231263 KO:K02900 InterPro:IPR021131
SUPFAM:SSF52080 OMA:HHRINRD GeneTree:ENSGT00390000005534
RefSeq:NP_490927.1 ProteinModelPortal:Q9BKU5 SMR:Q9BKU5
STRING:Q9BKU5 PaxDb:Q9BKU5 PRIDE:Q9BKU5 EnsemblMetazoa:Y37E3.8a.1
EnsemblMetazoa:Y37E3.8a.2 GeneID:171767 KEGG:cel:CELE_Y37E3.8
UCSC:Y37E3.8a.1 CTD:171767 WormBase:Y37E3.8a InParanoid:Q9BKU5
NextBio:872603 ArrayExpress:Q9BKU5 Uniprot:Q9BKU5
Length = 145
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 29/42 (69%), Positives = 35/42 (83%)
Query: 170 GYYKVLGKGRIPKQPVIVKAKFFSKLAEEKIKAVGGACVLTA 211
GY+KVLGKG +P+ P+IVKA+FFS AE+KIK GGACVL A
Sbjct: 104 GYFKVLGKGLLPETPLIVKARFFSHEAEQKIKKAGGACVLVA 145
>UNIPROTKB|J9NXP9 [details] [associations]
symbol:J9NXP9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] Pfam:PF00828
GO:GO:0005840 InterPro:IPR021131 SUPFAM:SSF52080
GeneTree:ENSGT00390000005534 EMBL:AAEX03012968
Ensembl:ENSCAFT00000000835 Uniprot:J9NXP9
Length = 147
Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 29/47 (61%), Positives = 39/47 (82%)
Query: 165 LVDI--AGYYKVLGKGRIPKQPVIVKAKFFSKLAEEKIKAVGGACVL 209
++D+ +GYY VLGKG++ KQ +I+KAKFFS+ AEEKIK +GG CVL
Sbjct: 99 IIDVVRSGYYTVLGKGKLLKQSLIMKAKFFSRRAEEKIKGMGGVCVL 145
>UNIPROTKB|F1LZW1 [details] [associations]
symbol:F1LZW1 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001196
PROSITE:PS00475 Pfam:PF00828 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 InterPro:IPR021131 SUPFAM:SSF52080 IPI:IPI00779755
Ensembl:ENSRNOT00000056160 Uniprot:F1LZW1
Length = 140
Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 49/146 (33%), Positives = 70/146 (47%)
Query: 65 LCERLKSTPPGPADRKLWISMTANGKYFHVGKRSLF-KGHHQFNIHQRHLTAFSIVLNMN 123
L RLK T RKL + ++G + +G R+ K HH+ N + H F V+ +
Sbjct: 3 LLSRLKKT------RKL-LGHVSHGGHGPIGHRNAGGKHHHRINSDKCHPGNFGKVVMRH 55
Query: 124 MGIXXXXXXXXXXXXXXLLNMNMGIVRSATGRQVLLALTSLLVDIAGYYKVLGKGRIPKQ 183
+ + L + +R + A + G+Y+VLGKG++PKQ
Sbjct: 56 VHLKRNQSFCPTVNLDKLGTLVSEQIRVNAAKNKTAAAPVIDAIRLGFYRVLGKGKLPKQ 115
Query: 184 PVIVKAKFFSKLAEEKIKAVGGACVL 209
PV VKAK S+ AEEKIK G ACVL
Sbjct: 116 PVTVKAKL-SRRAEEKIKDSGAACVL 140
>SGD|S000003071 [details] [associations]
symbol:RPL28 "Ribosomal 60S subunit protein L28" species:4932
"Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IMP]
[GO:0006412 "translation" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IDA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=TAS] [GO:0002181 "cytoplasmic translation" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0046677 "response to antibiotic" evidence=IEA] [GO:0046898
"response to cycloheximide" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;TAS] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001196 PROSITE:PS00475
SGD:S000003071 Pfam:PF00828 GO:GO:0005634 EMBL:BK006941
GO:GO:0046677 GO:GO:0003723 GO:GO:0003735 GO:GO:0002181 PDB:4B6A
PDBsum:4B6A GO:GO:0046898 GO:GO:0022625 eggNOG:COG0200
HOGENOM:HOG000231263 KO:K02900 InterPro:IPR021131 SUPFAM:SSF52080
PDB:1K5Y PDB:1S1I PDB:3IZS PDB:3O58 PDB:3O5H PDB:3U5E PDB:3U5I
PDBsum:1K5Y PDBsum:1S1I PDBsum:3IZS PDBsum:3O58 PDBsum:3O5H
PDBsum:3U5E PDBsum:3U5I GeneTree:ENSGT00390000005534 OMA:HHHRTNL
OrthoDB:EOG47WRZ6 EMBL:X01573 EMBL:Z72625 EMBL:M19490 PIR:A02782
RefSeq:NP_011412.1 ProteinModelPortal:P02406 SMR:P02406
IntAct:P02406 MINT:MINT-1324980 STRING:P02406 PaxDb:P02406
PeptideAtlas:P02406 EnsemblFungi:YGL103W GeneID:852775
KEGG:sce:YGL103W EvolutionaryTrace:P02406 NextBio:972248
Genevestigator:P02406 GermOnline:YGL103W Uniprot:P02406
Length = 149
Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 33/52 (63%), Positives = 39/52 (75%)
Query: 162 TSLLVDI--AGYYKVLGKGRIPKQPVIVKAKFFSKLAEEKIKAVGGACVLTA 211
T+ ++D AGY K+LGKGRIP PVIVKA+F SKLAEEKI+A GG L A
Sbjct: 98 TAPVIDTLAAGYGKILGKGRIPNVPVIVKARFVSKLAEEKIRAAGGVVELIA 149
>GENEDB_PFALCIPARUM|PFF0885w [details] [associations]
symbol:PFF0885w "60S ribosomal protein L27a,
putative" species:5833 "Plasmodium falciparum" [GO:0015934 "large
ribosomal subunit" evidence=ISS] InterPro:IPR001196 PROSITE:PS00475
Pfam:PF00828 GO:GO:0006412 GO:GO:0003735 EMBL:AL844505
GO:GO:0015934 HOGENOM:HOG000231263 InterPro:IPR021131
SUPFAM:SSF52080 OMA:FCPTINL ProtClustDB:PTZ00160 RefSeq:XP_966168.1
ProteinModelPortal:C6KT23 SMR:C6KT23 PRIDE:C6KT23
EnsemblProtists:PFF0885w:mRNA GeneID:3885802 KEGG:pfa:PFF0885w
EuPathDB:PlasmoDB:PF3D7_0618300 Uniprot:C6KT23
Length = 148
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 27/50 (54%), Positives = 40/50 (80%)
Query: 165 LVDIA--GYYKVLGKGRIP-KQPVIVKAKFFSKLAEEKIKAVGGACVLTA 211
++D+ GY+KVLG G++ QP++VKA++FS +AE+KIKAVGG C+L A
Sbjct: 99 VIDVTRKGYFKVLGNGKLKHNQPIVVKARYFSSVAEKKIKAVGGQCILVA 148
>UNIPROTKB|C6KT23 [details] [associations]
symbol:PFF0885w "60S ribosomal protein L27a, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0015934 "large
ribosomal subunit" evidence=ISS] InterPro:IPR001196 PROSITE:PS00475
Pfam:PF00828 GO:GO:0006412 GO:GO:0003735 EMBL:AL844505
GO:GO:0015934 HOGENOM:HOG000231263 InterPro:IPR021131
SUPFAM:SSF52080 OMA:FCPTINL ProtClustDB:PTZ00160 RefSeq:XP_966168.1
ProteinModelPortal:C6KT23 SMR:C6KT23 PRIDE:C6KT23
EnsemblProtists:PFF0885w:mRNA GeneID:3885802 KEGG:pfa:PFF0885w
EuPathDB:PlasmoDB:PF3D7_0618300 Uniprot:C6KT23
Length = 148
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 27/50 (54%), Positives = 40/50 (80%)
Query: 165 LVDIA--GYYKVLGKGRIP-KQPVIVKAKFFSKLAEEKIKAVGGACVLTA 211
++D+ GY+KVLG G++ QP++VKA++FS +AE+KIKAVGG C+L A
Sbjct: 99 VIDVTRKGYFKVLGNGKLKHNQPIVVKARYFSSVAEKKIKAVGGQCILVA 148
>TAIR|locus:2028080 [details] [associations]
symbol:RPL27AB species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=ISS;TAS] [GO:0015934 "large ribosomal
subunit" evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0022626 "cytosolic ribosome" evidence=IDA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IDA] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0009908 "flower
development" evidence=IMP] [GO:0010229 "inflorescence development"
evidence=IMP] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001196 PROSITE:PS00475 Pfam:PF00828 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009506 GO:GO:0005730 GO:GO:0006412
GO:GO:0003735 GO:GO:0009908 GO:GO:0010229 EMBL:AC005292
GO:GO:0022625 eggNOG:COG0200 HOGENOM:HOG000231263 KO:K02900
ProtClustDB:CLSN2682070 InterPro:IPR021131 SUPFAM:SSF52080
EMBL:AF324716 EMBL:AF349525 EMBL:AF410280 EMBL:BT000542 EMBL:Z26208
IPI:IPI00544566 RefSeq:NP_173743.1 UniGene:At.20789
ProteinModelPortal:Q9LR33 SMR:Q9LR33 IntAct:Q9LR33 STRING:Q9LR33
PaxDb:Q9LR33 PRIDE:Q9LR33 EnsemblPlants:AT1G23290.1 GeneID:838938
KEGG:ath:AT1G23290 TAIR:At1g23290 InParanoid:Q9LR33 OMA:HHRINRD
PhylomeDB:Q9LR33 Genevestigator:Q9LR33 GermOnline:AT1G23290
Uniprot:Q9LR33
Length = 146
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 29/50 (58%), Positives = 38/50 (76%)
Query: 165 LVDIA--GYYKVLGKGRIPK-QPVIVKAKFFSKLAEEKIKAVGGACVLTA 211
L+D+ G++KVLGKG +P+ +P +VKAK SK AE+KIK GGA VLTA
Sbjct: 97 LIDVTQHGFFKVLGKGHLPENKPFVVKAKLISKTAEKKIKEAGGAVVLTA 146
>TAIR|locus:2033637 [details] [associations]
symbol:AT1G70600 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0022626 "cytosolic ribosome"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001196 PROSITE:PS00475 Pfam:PF00828 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009506 GO:GO:0016020 GO:GO:0006412
EMBL:AC011663 GO:GO:0003735 GO:GO:0022625 eggNOG:COG0200
HOGENOM:HOG000231263 KO:K02900 ProtClustDB:CLSN2682070
InterPro:IPR021131 SUPFAM:SSF52080 EMBL:X91959 EMBL:AY039519
EMBL:AY048228 EMBL:AY091706 EMBL:AY085573 EMBL:Z17767
IPI:IPI00548463 PIR:S71256 RefSeq:NP_177217.1 UniGene:At.24536
UniGene:At.72396 ProteinModelPortal:P49637 SMR:P49637 STRING:P49637
PaxDb:P49637 PRIDE:P49637 EnsemblPlants:AT1G70600.1 GeneID:843397
KEGG:ath:AT1G70600 TAIR:At1g70600 InParanoid:P49637 OMA:FCPTINL
PhylomeDB:P49637 Genevestigator:P49637 GermOnline:AT1G70600
Uniprot:P49637
Length = 146
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 29/50 (58%), Positives = 38/50 (76%)
Query: 165 LVDIA--GYYKVLGKGRIPK-QPVIVKAKFFSKLAEEKIKAVGGACVLTA 211
L+D+ G++KVLGKG +P+ +P +VKAK SK AE+KIK GGA VLTA
Sbjct: 97 LIDVTQHGFFKVLGKGHLPENKPFVVKAKLISKTAEKKIKEAGGAVVLTA 146
>UNIPROTKB|F1PIL3 [details] [associations]
symbol:F1PIL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] Pfam:PF00828
GO:GO:0005840 InterPro:IPR021131 SUPFAM:SSF52080
GeneTree:ENSGT00390000005534 EMBL:AAEX03013089
ProteinModelPortal:F1PIL3 Ensembl:ENSCAFT00000006906 OMA:IHYHRIN
Uniprot:F1PIL3
Length = 136
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 28/47 (59%), Positives = 38/47 (80%)
Query: 165 LVDI--AGYYKVLGKGRIPKQPVIVKAKFFSKLAEEKIKAVGGACVL 209
++D+ +G+YK LGK ++PKQPVI+KAKFFS+ AEE IK V +CVL
Sbjct: 91 IIDVVQSGHYKALGKEQLPKQPVIMKAKFFSRRAEE-IKGVRKSCVL 136
>ASPGD|ASPL0000039794 [details] [associations]
symbol:AN10416 species:162425 "Emericella nidulans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001196 PROSITE:PS00475 Pfam:PF00828
GO:GO:0006412 EMBL:BN001306 GO:GO:0005840 GO:GO:0003735
HOGENOM:HOG000231263 InterPro:IPR021131 SUPFAM:SSF52080 OMA:HHHRTNL
EnsemblFungi:CADANIAT00009591 Uniprot:C8VHC3
Length = 149
Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 25/52 (48%), Positives = 38/52 (73%)
Query: 162 TSLLVDIA--GYYKVLGKGRIPKQPVIVKAKFFSKLAEEKIKAVGGACVLTA 211
T+ ++D+ GY KVLGKGR+P+ P++V+A++ S+ AE+KIK GG L A
Sbjct: 98 TAPVIDLLSLGYSKVLGKGRLPEVPIVVRARYVSRDAEQKIKEAGGVVELVA 149
>POMBASE|SPCC5E4.07 [details] [associations]
symbol:rpl2802 "60S ribosomal protein L27/L28"
species:4896 "Schizosaccharomyces pombe" [GO:0003735 "structural
constituent of ribosome" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0006412 "translation" evidence=ISO] [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISO]
InterPro:IPR001196 PROSITE:PS00475 PomBase:SPCC5E4.07 Pfam:PF00828
GO:GO:0005739 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0006412
GO:GO:0003735 GO:GO:0022625 HOGENOM:HOG000231263 KO:K02900
InterPro:IPR021131 SUPFAM:SSF52080 EMBL:X57207 EMBL:X80929
PIR:S60002 RefSeq:NP_587907.1 ProteinModelPortal:P36585 SMR:P36585
IntAct:P36585 STRING:P36585 EnsemblFungi:SPCC5E4.07.1
GeneID:2539548 KEGG:spo:SPCC5E4.07 OMA:ACVLLKP OrthoDB:EOG47WRZ6
NextBio:20800708 Uniprot:P36585
Length = 148
Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 25/43 (58%), Positives = 32/43 (74%)
Query: 169 AGYYKVLGKGRIPKQPVIVKAKFFSKLAEEKIKAVGGACVLTA 211
+GY KVLGKGR+P+ PVIV+ ++ S+ AEEKIK GG L A
Sbjct: 106 SGYGKVLGKGRLPETPVIVQTRYVSRRAEEKIKQAGGVVELIA 148
>POMBASE|SPBC776.11 [details] [associations]
symbol:rpl2801 "60S ribosomal protein L27/L28"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006412 "translation" evidence=ISO] [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISO]
InterPro:IPR001196 PROSITE:PS00475 PomBase:SPBC776.11 Pfam:PF00828
GO:GO:0005730 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003735
GO:GO:0002181 GO:GO:0022625 eggNOG:COG0200 HOGENOM:HOG000231263
KO:K02900 InterPro:IPR021131 SUPFAM:SSF52080 OMA:HHHRTNL
OrthoDB:EOG47WRZ6 EMBL:Z37501 PIR:S60001 RefSeq:NP_596326.1
ProteinModelPortal:P57728 SMR:P57728 STRING:P57728
EnsemblFungi:SPBC776.11.1 GeneID:2541130 KEGG:spo:SPBC776.11
NextBio:20802243 Uniprot:P57728
Length = 148
Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 24/43 (55%), Positives = 31/43 (72%)
Query: 169 AGYYKVLGKGRIPKQPVIVKAKFFSKLAEEKIKAVGGACVLTA 211
+GY KVLGKGR+P PVI++ ++ S+ AEEKIK GG L A
Sbjct: 106 SGYGKVLGKGRLPDTPVIIQTRYVSRRAEEKIKQAGGVVELIA 148
>UNIPROTKB|G4ML84 [details] [associations]
symbol:MGG_06721 "60S ribosomal protein L28" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR001196 PROSITE:PS00475 Pfam:PF00828
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:CM001231
GO:GO:0043581 KO:K02900 InterPro:IPR021131 SUPFAM:SSF52080
RefSeq:XP_003709432.1 ProteinModelPortal:G4ML84
EnsemblFungi:MGG_06721T0 GeneID:2684894 KEGG:mgr:MGG_06721
Uniprot:G4ML84
Length = 150
Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 24/42 (57%), Positives = 32/42 (76%)
Query: 170 GYYKVLGKGRIPKQPVIVKAKFFSKLAEEKIKAVGGACVLTA 211
GY K+LGKGR+P P++V+A++ SK AE+KIK GGA L A
Sbjct: 109 GYSKLLGKGRLPDVPMVVRARWVSKEAEKKIKEAGGAIELVA 150
>RGD|1565679 [details] [associations]
symbol:RGD1565679 "similar to 60S ribosomal protein L27a (L29)"
species:10116 "Rattus norvegicus" [GO:0005840 "ribosome"
evidence=IEA] RGD:1565679 Pfam:PF00828 GO:GO:0005840
InterPro:IPR021131 SUPFAM:SSF52080 GeneTree:ENSGT00390000005534
OrthoDB:EOG4CJVJC IPI:IPI00781596 RefSeq:XP_001073308.1
RefSeq:XP_234016.1 Ensembl:ENSRNOT00000060587 GeneID:298892
KEGG:rno:298892 CTD:298892 NextBio:644470 Uniprot:D4AAX8
Length = 144
Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 27/48 (56%), Positives = 34/48 (70%)
Query: 165 LVDI-AGYYKVLGKGRIPKQPVIVKAKFFSKLAEEKIKAVGGACVLTA 211
+ D+ +GYYKVLGKG K+ +IV+AK S AEEK +GGACVL A
Sbjct: 100 ITDVRSGYYKVLGKGS-SKESLIVRAK--SSSAEEKTNGIGGACVLVA 144
>UNIPROTKB|F1LVX4 [details] [associations]
symbol:F1LVX4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005840 "ribosome" evidence=IEA]
Pfam:PF00828 GO:GO:0005840 InterPro:IPR021131 SUPFAM:SSF52080
GeneTree:ENSGT00390000005534 IPI:IPI00766682
Ensembl:ENSRNOT00000058502 Uniprot:F1LVX4
Length = 122
Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 25/42 (59%), Positives = 29/42 (69%)
Query: 170 GYYKVLGKGRIPKQPVIVKAKFFSKLAEEKIKAVGGACVLTA 211
GYYKVL PKQ VI++AK FS++ EKI VGGA VL A
Sbjct: 81 GYYKVLETETFPKQSVIMEAKVFSRITGEKITGVGGASVLVA 122
>UNIPROTKB|F1M730 [details] [associations]
symbol:F1M730 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005840 "ribosome" evidence=IEA]
Pfam:PF00828 GO:GO:0005840 InterPro:IPR021131 SUPFAM:SSF52080
OMA:IHYHRIN IPI:IPI00782389 Ensembl:ENSRNOT00000060788
Uniprot:F1M730
Length = 119
Score = 111 (44.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 163 SLLVDIA--GYYKVLGKGRIPKQPVIVKAKFFSKLAEEK 199
S ++D+ GYYKVL K ++PKQPVI+K KFFS+ AEEK
Sbjct: 82 SPIIDVVRFGYYKVLRKRKLPKQPVIMK-KFFSRRAEEK 119
>TAIR|locus:2010406 [details] [associations]
symbol:AT1G12960 "AT1G12960" species:3702 "Arabidopsis
thaliana" [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840
"ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IDA]
PROSITE:PS00475 Pfam:PF00828 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC012187 GO:GO:0022625
IPI:IPI00537959 PIR:E86263 RefSeq:NP_172756.1 UniGene:At.51592
ProteinModelPortal:Q9LPV3 SMR:Q9LPV3 STRING:Q9LPV3
EnsemblPlants:AT1G12960.1 GeneID:837854 KEGG:ath:AT1G12960
TAIR:At1g12960 eggNOG:COG0200 HOGENOM:HOG000231263
InParanoid:Q9LPV3 KO:K02900 OMA:TRNLREH PhylomeDB:Q9LPV3
ProtClustDB:CLSN2682070 Genevestigator:Q9LPV3 GermOnline:AT1G12960
InterPro:IPR021131 SUPFAM:SSF52080 Uniprot:Q9LPV3
Length = 104
Score = 97 (39.2 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 22/38 (57%), Positives = 27/38 (71%)
Query: 174 VLGKGRIPK-QPVIVKAKFFSKLAEEKIKAVGGACVLT 210
VLGKG +P+ +PV+VKAK S E+KIK G A VLT
Sbjct: 63 VLGKGFLPENKPVVVKAKLVSNTDEKKIKEAGSAVVLT 100
>UNIPROTKB|F1M3C2 [details] [associations]
symbol:F1M3C2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005840 "ribosome" evidence=IEA]
Pfam:PF00828 GO:GO:0022625 InterPro:IPR021131 SUPFAM:SSF52080
GeneTree:ENSGT00390000005534 IPI:IPI00951975
Ensembl:ENSRNOT00000031419 Uniprot:F1M3C2
Length = 145
Score = 98 (39.6 bits), Expect = 0.00060, P = 0.00060
Identities = 19/34 (55%), Positives = 28/34 (82%)
Query: 166 VDIAGYYKVLGKGRIPKQPVIVKAKFFSKLAEEK 199
V + G Y+VLG+G++P++PVIVKA+ S+ AEEK
Sbjct: 99 VVLLGCYRVLGEGKLPERPVIVKAEVISRGAEEK 132
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.137 0.419 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 211 188 0.00087 110 3 11 22 0.39 32
31 0.42 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 42
No. of states in DFA: 600 (64 KB)
Total size of DFA: 172 KB (2100 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 15.64u 0.08s 15.72t Elapsed: 00:00:05
Total cpu time: 15.64u 0.08s 15.72t Elapsed: 00:00:06
Start: Thu Aug 15 13:40:52 2013 End: Thu Aug 15 13:40:58 2013