RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy9423
(1346 letters)
>gnl|CDD|191698 pfam07202, Tcp10_C, T-complex protein 10 C-terminus. This family
represents the C-terminus (approximately 180 residues)
of eukaryotic T-complex protein 10. The T-complex is
involved in spermatogenesis in mice.
Length = 179
Score = 37.1 bits (86), Expect = 0.026
Identities = 46/167 (27%), Positives = 67/167 (40%), Gaps = 29/167 (17%)
Query: 711 PEGTTK--YPEGTTVTQPTPEGTLK--YPEGTTKYPEGTTKYPEGTTATQPTPEGTTKYP 766
P GT K +G TV G +K P+GT Y Y T T YP
Sbjct: 16 PNGTRKEISADGKTVIVTFFNGDIKQTMPDGTVIY------YYAEAQTTHTT------YP 63
Query: 767 RGTTVTQ-PTPQVTTKYPEGTTQTQTTPEGTIKY----PEETTKYPEGTTVTQPTPEGTT 821
G V Q P Q +P+G+ + P+GT+K +E + YP+GT V +
Sbjct: 64 DGLEVLQFPNGQTEKHFPDGSKEI-HFPDGTVKILNPDGQEESVYPDGTVVRV------S 116
Query: 822 KYPEGTTKYPEGTTGTQPTPEGTTKYPEGTTVT-HPTPEGTTKYPEG 867
+ + ++P G +YP+GT T +P T+Y G
Sbjct: 117 RNGDKEIEFPNGQREIHTKRYKRREYPDGTVKTVYPNGRQETRYSSG 163
Score = 31.3 bits (71), Expect = 2.4
Identities = 43/157 (27%), Positives = 59/157 (37%), Gaps = 24/157 (15%)
Query: 797 IKYPEETTK--YPEGTTVTQPTPEGTTK--YPEGTTKYPEGTTGTQPTPEGTTKYPEGTT 852
I +P T K +G TV G K P+GT Y T T YP+G
Sbjct: 13 IWFPNGTRKEISADGKTVIVTFFNGDIKQTMPDGTVIYYYAEAQTT-----HTTYPDGLE 67
Query: 853 VTH-PTPEGTTKYPEGTTVTQPTPEGTIK-----------YPEGITVT-QPTPEGTTTYP 899
V P + +P+G+ P+GT+K YP+G V + +P
Sbjct: 68 VLQFPNGQTEKHFPDGSKEIH-FPDGTVKILNPDGQEESVYPDGTVVRVSRNGDKEIEFP 126
Query: 900 EGTTVIQTTPEGTTKYPEGTTVT-QPTPEGTTKYPEG 935
G I T +YP+GT T P T+Y G
Sbjct: 127 NGQREIHTKRYKRREYPDGTVKTVYPNGRQETRYSSG 163
>gnl|CDD|218439 pfam05109, Herpes_BLLF1, Herpes virus major outer envelope
glycoprotein (BLLF1). This family consists of the BLLF1
viral late glycoprotein, also termed gp350/220. It is the
most abundantly expressed glycoprotein in the viral
envelope of the Herpesviruses and is the major antigen
responsible for stimulating the production of
neutralising antibodies in vivo.
Length = 830
Score = 37.8 bits (87), Expect = 0.042
Identities = 72/363 (19%), Positives = 117/363 (32%), Gaps = 16/363 (4%)
Query: 904 VIQTTPEGTTKYPEGTTVTQPTPEGTTKYPEGTTVTQPTLGGTTKYSEGATKYPEGTT-- 961
V P+ T T+ P TT P ++ + G T ++ + P GTT
Sbjct: 421 VFHKAPDTTKSVIFVYTLVHVEPHKTTAVPTTPSLPPASTGPTVSTADPTSGTPTGTTSS 480
Query: 962 ----VTEPTPEGTTKYPEGTTKYPEGTTVTQATPEGTFKYPEGTTNYPEGTTVTQPTLGG 1017
T PT T+ P T+ P TT +P P + T
Sbjct: 481 TLPEDTSPTSRTTSATPNATSPTPAVTTPNATSPTTQKTSDTPNATSPTPIVIGVTTTAT 540
Query: 1018 TTKYSEGATKYPEGTTVTEPTPEGTTKYPEGTTKYPEGTTVTQATPEGTTKYPEGTTKYP 1077
+ + VTE +P T P T+ T+ GT P
Sbjct: 541 SPPTGTTSVPNATSPQVTEESPVNNTNTPVVTSAPSVLTSAVTTGQHGTGSSPTSQQPGI 600
Query: 1078 EGTTVTEPTPEGTTKYPEGTTKYPEGTTKYTEGTTGTKPTPEGKTKYP-----EGTTVTQ 1132
++ + P T+ P T+ +P G TE T T T P + V+
Sbjct: 601 PSSSHSTPRSNSTSTTPLLTSAHPTGGENITEETPSVPSTTHVSTLSPGPGPGTTSQVSG 660
Query: 1133 PTPEGTTKYPEGTAVTQPTPEGTTKYSEGTTVTQPTPEGTTKYPEG-----TTVTQPTPE 1187
P T++YP VT+ P + + T + T
Sbjct: 661 PGNSSTSRYPGEVHVTEGMPNPNATSPSAPSGQKTAVPTVTSTGGKANSTTKETSGSTLM 720
Query: 1188 GTTKYPEGTTVTQPTPEGTTKYPEGTSVTQPTPEGTTKYPELTTITQPTPEGTTKYPEGT 1247
+T + TP T Y ++ ++ P T P +TT P T++P+ +
Sbjct: 721 ASTSPHTNEGAFRTTPYNATTYLPPSTSSKLRPRWTFTSPPVTTKQATVPVPPTQHPDHS 780
Query: 1248 SVT 1250
+++
Sbjct: 781 NLS 783
Score = 36.3 bits (83), Expect = 0.15
Identities = 72/348 (20%), Positives = 109/348 (31%), Gaps = 17/348 (4%)
Query: 403 TPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYP 462
P+ T T+ P T P ++ + T+ T PT + P
Sbjct: 425 APDTTKSVIFVYTLVHVEPHKTTAVPTTPSLPPASTGPTVS-TADPTSGTPTGTTSSTLP 483
Query: 463 EGTTVTQPTPEGTIKYPEGTTVTQPTPEGTTTYPERTT----VTQPTPESTTKYPEGTTV 518
E T+ T T T T TP T+ ++T+ T PTP G T
Sbjct: 484 EDTSPTSRTTSATPNATSPTPAV-TTPNATSPTTQKTSDTPNATSPTPIVI-----GVTT 537
Query: 519 TQPTPEGTTKYPEGTTVTQPTSEGTTKYPEGTTVTQPTPEGTTKYPEGTTVTQPTSEGTT 578
T +P T T Q T E VT T+ G T +
Sbjct: 538 TATSPPTGTTSVPNATSPQVTEESPVNNTNTPVVTSAPSVLTSAVTTGQHGTGSSPTSQQ 597
Query: 579 KYPEGTTVTQPTPEGTTKYPEGTTKYPEGTTVTQPTSEGTTKYPEGTTVTQPTPEGTTKY 638
++ + P T+ P T+ +P G + +T++ GTT
Sbjct: 598 PGIPSSSHSTPRSNSTSTTPLLTSAHPTGGENITEETPSVPSTTHVSTLSPGPGPGTTSQ 657
Query: 639 PEG-----TTKYPEGTTVTQPTPEGTTKYSEGTTEYPEGT-TVTRPTPEGTTKYSEGTTE 692
G T++YP VT+ P + TVT + + E +
Sbjct: 658 VSGPGNSSTSRYPGEVHVTEGMPNPNATSPSAPSGQKTAVPTVTSTGGKANSTTKETSGS 717
Query: 693 YPEGTTKYPEGATVTQPTPEGTTKYPEGTTVTQPTPEGTLKYPEGTTK 740
+T + TP T Y +T ++ P T P TTK
Sbjct: 718 TLMASTSPHTNEGAFRTTPYNATTYLPPSTSSKLRPRWTFTSPPVTTK 765
Score = 35.5 bits (81), Expect = 0.20
Identities = 62/339 (18%), Positives = 97/339 (28%), Gaps = 8/339 (2%)
Query: 454 TPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTTTYPERTTVTQPTPESTTKYP 513
P+ T T+ P T P ++ + T + T PT +++ P
Sbjct: 425 APDTTKSVIFVYTLVHVEPHKTTAVPTTPSLPPASTGPTVS-TADPTSGTPTGTTSSTLP 483
Query: 514 EGTTVTQPTPEGTTKYPEGTTVTQP---TSEGTTKYPEGTTVTQPTPEGTTKYPEGTTVT 570
E T+ T T T T TS T K + T PTP T+
Sbjct: 484 EDTSPTSRTTSATPNATSPTPAVTTPNATSPTTQKTSDTPNATSPTPIVIGVTTTATSPP 543
Query: 571 QPTSEGTTKYPEGTTVTQPTPEGTTKYPEGTTKYPEGTTVTQPTSEGTTKYPEGTTVTQP 630
T+ T P T T+ GT P P
Sbjct: 544 TGTTSVPNATSPQVTEESPVNNTNTPVVTSAPSV--LTSAVTTGQHGTGSSPTSQQPGIP 601
Query: 631 TPEGTTKYPEGTTKYPEGTTVTQPTPEGTTKYSEGTTEYPEGTTVTRPTPEGTTKYSEGT 690
+ +T T+ P T+ E T+ + +T++ GTT G
Sbjct: 602 SSSHSTPRSNSTSTTPLLTSAHPTGGENITEETPSVPSTTHVSTLSPGPGPGTTSQVSGP 661
Query: 691 TEYPEGTTKYPEGATVTQPTPEGTTKYPEGTTVTQPTPEGTLKYPEGTTKYPEGTTKYPE 750
T++YP VT+ P P + + + T+
Sbjct: 662 GN--SSTSRYPGEVHVTEGMPNPNATSPSAPSGQKTAVPTVTSTGGKANSTTKETSGSTL 719
Query: 751 GTTATQPTPEGTTKYPRGTTVTQPTPQVTTKYPEGTTQT 789
+ + T EG + T P ++K T T
Sbjct: 720 MASTSPHTNEGAFRTTPYNATTYLPPSTSSKLRPRWTFT 758
Score = 35.5 bits (81), Expect = 0.23
Identities = 64/349 (18%), Positives = 98/349 (28%), Gaps = 8/349 (2%)
Query: 505 TPESTTKYPEGTTVTQPTPEGTTKYPEGTTVTQPTSEGTTKYPEGTTVTQPTPEGTTKYP 564
P++T T+ P TT P ++ ++ T T PT ++ P
Sbjct: 425 APDTTKSVIFVYTLVHVEPHKTTAVPTTPSLPPASTGPTVS-TADPTSGTPTGTTSSTLP 483
Query: 565 EGTTVTQPTSEGTTKYPEGTTVTQPTPEGTTKYPEGTTKYPEGTTVTQPTSEGTTKYPEG 624
E T+ T T+ T T TP T+ + T+ P T+ T TT
Sbjct: 484 EDTSPTSRTTSATPNATSPTPAV-TTPNATSPTTQKTSDTPNATSPTPIVIGVTTTATSP 542
Query: 625 TTVTQPTPEGTTKYPEGTTKYPEGTTVTQPTP-----EGTTKYSEGTTEYPEGTTVTRPT 679
T T P T+ + T + T GT P P+
Sbjct: 543 PTGTTSVPNATSPQVTEESPVNNTNTPVVTSAPSVLTSAVTTGQHGTGSSPTSQQPGIPS 602
Query: 680 PEGTTKYSEGTTEYPEGTTKYPEGATVTQPTPEGTTKYPEGTTVTQPTPEGTLKYPEGTT 739
+T S T+ P T+ +P G +T++ GT G
Sbjct: 603 SSHSTPRSNSTSTTPLLTSAHPTGGENITEETPSVPSTTHVSTLSPGPGPGTTSQVSGPG 662
Query: 740 KYPEGTTKYPEGTTATQPTPEGTTKYPRGTTVTQPTPQVTTKYPEGTTQTQTTPEGTIKY 799
T P P T+ T P VT+ + + T+ T T+
Sbjct: 663 NSSTSRYPGEVHVTEGMPNPNATSPSAPSGQKT-AVPTVTSTGGKANSTTKETSGSTLMA 721
Query: 800 PEETTKYPEGTTVTQPTPEGTTKYPEGTTKYPEGTTGTQPTPEGTTKYP 848
T + P T + P P
Sbjct: 722 STSPHTNEGAFRTTPYNATTYLPPSTSSKLRPRWTFTSPPVTTKQATVP 770
Score = 34.4 bits (78), Expect = 0.47
Identities = 60/355 (16%), Positives = 92/355 (25%), Gaps = 9/355 (2%)
Query: 660 TKYSEGTTEYPEGTTVTRPTPEGTTKYSEGTTEYPEGTTKYPEGATVTQPTPEGTTKYPE 719
K + T T+ P TT + P T A T TP GTT
Sbjct: 423 HKAPDTTKSVIFVYTLVHVEPHKTTAVPTTPSLPPASTGPTVSTADPTSGTPTGTT---S 479
Query: 720 GTTVTQPTPEGTLKYPEGTTKYPEGTTKYPEGTTATQPTPEGTTKYPRGTTVTQPTPQVT 779
T +P P P T+ T T T +
Sbjct: 480 STLPEDTSPTSRTTSATPNATSPTPAVTTPNATSPTTQKTSDTPNATSPTPIVIGVTTTA 539
Query: 780 TKYPEGTTQTQTTPEGTIKYPEETTKYPEGTTVTQPTPEGTTKYPEGTTKYPEGTTGTQP 839
T P GTT + + P+ + T+
Sbjct: 540 TSPPTGTTSVPNATSPQVTEESPVNNTNTPVVTSAPSVLTSAVTTGQHGTGSSPTSQQPG 599
Query: 840 TPEGTTKYPEGTTVTHPTPEGTTKYPEGTTVTQPTPEGTIKYPEGITVTQPTPEGTTTYP 899
P + P + + + G +T+ TP ++ P P TT
Sbjct: 600 IPSSSHSTPRSNSTSTTPLLTSAHPTGGENITEETPSVPSTT--HVSTLSPGPGPGTT-- 655
Query: 900 EGTTVIQTTPEGTTKYPEGTTVTQPTPEGTTKYPEGTTVTQPTLGGTTKYSEGATKYPEG 959
+ V T++YP VT+ P P + + + T A +
Sbjct: 656 --SQVSGPGNSSTSRYPGEVHVTEGMPNPNATSPSAPSGQKTAVPTVTSTGGKANSTTKE 713
Query: 960 TTVTEPTPEGTTKYPEGTTKYPEGTTVTQATPEGTFKYPEGTTNYPEGTTVTQPT 1014
T+ + + EG + T P + K T T Q T
Sbjct: 714 TSGSTLMASTSPHTNEGAFRTTPYNATTYLPPSTSSKLRPRWTFTSPPVTTKQAT 768
Score = 34.0 bits (77), Expect = 0.61
Identities = 74/366 (20%), Positives = 109/366 (29%), Gaps = 13/366 (3%)
Query: 301 TPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYP 360
P+ T T+ P T P ++ + T+ T PT + P
Sbjct: 425 APDTTKSVIFVYTLVHVEPHKTTAVPTTPSLPPASTGPTVS-TADPTSGTPTGTTSSTLP 483
Query: 361 EGTTVTQPTPEGTIKYPEGTTVTQP---TPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVT 417
E T+ T T T T T T K + T PTP G T T
Sbjct: 484 EDTSPTSRTTSATPNATSPTPAVTTPNATSPTTQKTSDTPNATSPTPIVI-----GVTTT 538
Query: 418 QPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIK 477
+P T Q T E + VT T G T +P
Sbjct: 539 ATSPPTGTTSVPNATSPQVTEESPVNNTNTPVVTSAPSVLTSAVTTGQHGTGSSPTSQQP 598
Query: 478 YPEGTTVTQPTPEGTTTYPERTTVTQPTPESTTKYPEGTTVTQPTPEGTTKYPEGTT--V 535
++ + P T+T P T+ E+ T+ T + GTT V
Sbjct: 599 GIPSSSHSTPRSNSTSTTPLLTSAHPTGGENITEETPSVPSTTHVSTLSPGPGPGTTSQV 658
Query: 536 TQPTSEGTTKYPEGTTVTQPTPEGTTKYPEGTTVTQPTSEGTTKYPEGTTVTQPTPEGTT 595
+ P + T++YP VT+ P P + + T T G+T
Sbjct: 659 SGPGNSSTSRYPGEVHVTEGMPNPNATSPSAPSGQKTAVPTVTSTGGKANSTTKETSGST 718
Query: 596 KYPEGTTKYPEGTTVTQPTSEGTTKYPEGTTVTQPTPEGTTKYPEGTTKYPEGTTVTQPT 655
+T + T T Y +T ++ P T P TTK
Sbjct: 719 --LMASTSPHTNEGAFRTTPYNATTYLPPSTSSKLRPRWTFTSPPVTTKQATVPVPPTQH 776
Query: 656 PEGTTK 661
P+ +
Sbjct: 777 PDHSNL 782
Score = 33.6 bits (76), Expect = 0.80
Identities = 80/363 (22%), Positives = 113/363 (31%), Gaps = 18/363 (4%)
Query: 369 TPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYP 428
P+ T T+ P T P ++ + T+ T PT + P
Sbjct: 425 APDTTKSVIFVYTLVHVEPHKTTAVPTTPSLPPASTGPTVS-TADPTSGTPTGTTSSTLP 483
Query: 429 EGTTVTQPTPEGTIKYPEGTTVTQP---TPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVT 485
E T+ T T T T T T K + T PTP G T T
Sbjct: 484 EDTSPTSRTTSATPNATSPTPAVTTPNATSPTTQKTSDTPNATSPTPIVI-----GVTTT 538
Query: 486 QPTPEGTTTYPERTTVTQPTPESTTKYPEGTTVTQPTPEGTTKYPEGTTVTQPTSEGTTK 545
+P TT T Q T ES VT T+ G T +
Sbjct: 539 ATSPPTGTTSVPNATSPQVTEESPVNNTNTPVVTSAPSVLTSAVTTGQHGTGSSPTSQQP 598
Query: 546 YPEGTTVTQPTPEGTTKYPEGTTVTQPTSEGTTKYPEGTTVTQPTPEGTTKYPEGTTKYP 605
++ + P T+ P T+ E T+ T + GTT
Sbjct: 599 GIPSSSHSTPRSNSTSTTPLLTSAHPTGGENITEETPSVPSTTHVSTLSPGPGPGTTSQV 658
Query: 606 EGTTVTQPTSEGTTKYPEGTTVTQPTPEGTTKYPEGTTKYPEGTTVTQPTPEGTTKYSEG 665
G P + T++YP VT+ P P P G PT T +
Sbjct: 659 SG-----PGNSSTSRYPGEVHVTEGMPNPNATSPSA----PSGQKTAVPTVTSTGGKANS 709
Query: 666 TTEYPEGTTVTRPTPEGTTKYSEGTTEYPEGTTKYPEGATVTQPTPEGTTKYPEGTTVTQ 725
TT+ G+T+ T T + + TT Y T P ++ +P T+ T
Sbjct: 710 TTKETSGSTLMASTSPHTNEGAFRTTPYNATTYLPPSTSSKLRPRWTFTSPPVTTKQATV 769
Query: 726 PTP 728
P P
Sbjct: 770 PVP 772
Score = 32.8 bits (74), Expect = 1.4
Identities = 77/364 (21%), Positives = 117/364 (32%), Gaps = 28/364 (7%)
Query: 758 TPEGTTKYPRGTTVTQPTPQVTTKYPEGTTQTQTTPEGTIKYPEETTKYPEGTT------ 811
P+ T T+ P TT P + + T+ + T+ P GTT
Sbjct: 425 APDTTKSVIFVYTLVHVEPHKTTAVPTTPSLPPASTGPTVSTADPTSGTPTGTTSSTLPE 484
Query: 812 -------VTQPTPEGTTKYPEGTTKYPEGTTGTQPTPEGTTKYPE----GTTVTHPTPEG 860
T TP T+ P TT T + + P G T T +P
Sbjct: 485 DTSPTSRTTSATPNATSPTPAVTTPNATSPTTQKTSDTPNATSPTPIVIGVTTTATSPPT 544
Query: 861 TTKYPEGTTVTQPTPEGTIKYPEGITVTQPTPEGTTTYPEGTTVIQTTPEGTTKYPEGTT 920
T T Q T E + VT T+ G ++P ++
Sbjct: 545 GTTSVPNATSPQVTEESPVNNTNTPVVTSAPSVLTSAVTTGQHGTGSSPTSQQPGIPSSS 604
Query: 921 VTQPTPEGTTKYPEGTTVTQPTLGGTTKYSEGATKYPEGTTVTEPTPEGTTKYPEG---- 976
+ P T+ P T+ T+ + +T++ GTT G
Sbjct: 605 HSTPRSNSTSTTPLLTSAHPTGGENITEETPSVPSTTHVSTLSPGPGPGTTSQVSGPGNS 664
Query: 977 -TTKYPEGTTVTQATPEGTFKYPEGTTNYPEGTTVTQPTLGGTTKYSEGATKYPEGTTVT 1035
T++YP VT+ P P P G PT+ T + TK G+T+
Sbjct: 665 STSRYPGEVHVTEGMPNPNATSPSA----PSGQKTAVPTVTSTGGKANSTTKETSGSTLM 720
Query: 1036 EPTPEGTTKYPEGTTKYPEGTTVTQATPEGTTKYPEGTTKYPEGTTVTEPTPEGTTKYPE 1095
T T + TT Y T + +T + P T P TT P T++P+
Sbjct: 721 ASTSPHTNEGAFRTTPYNATTYLPPSTS--SKLRPRWTFTSPPVTTKQATVPVPPTQHPD 778
Query: 1096 GTTK 1099
+
Sbjct: 779 HSNL 782
Score = 32.8 bits (74), Expect = 1.5
Identities = 47/275 (17%), Positives = 71/275 (25%), Gaps = 5/275 (1%)
Query: 1008 TTVTQPTLGGTTKYSEGATKYPEGTTVTEPTPEGTTKYPEGTTKYPEGTTVTQATPEGTT 1067
T PT S G T T PT ++ PE T+ T +
Sbjct: 445 KTTAVPTTPSLPPASTGPTVSTADPTSGTPTGTTSSTLPEDTSP-----TSRTTSATPNA 499
Query: 1068 KYPEGTTKYPEGTTVTEPTPEGTTKYPEGTTKYPEGTTKYTEGTTGTKPTPEGKTKYPEG 1127
P P T+ T T T TT T TGT P +
Sbjct: 500 TSPTPAVTTPNATSPTTQKTSDTPNATSPTPIVIGVTTTATSPPTGTTSVPNATSPQVTE 559
Query: 1128 TTVTQPTPEGTTKYPEGTAVTQPTPEGTTKYSEGTTVTQPTPEGTTKYPEGTTVTQPTPE 1187
+ T + T S T+ P + P + +
Sbjct: 560 ESPVNNTNTPVVTSAPSVLTSAVTTGQHGTGSSPTSQQPGIPSSSHSTPRSNSTSTTPLL 619
Query: 1188 GTTKYPEGTTVTQPTPEGTTKYPEGTSVTQPTPEGTTKYPELTTITQPTPEGTTKYPEGT 1247
+ G +T+ TP + T P P T++ + G EG
Sbjct: 620 TSAHPTGGENITEETPSVPSTTHVSTLSPGPGPGTTSQVSGPGNSSTSRYPGEVHVTEGM 679
Query: 1248 SVTQPTPEGTTKYPESTTITQPTLEGPSITHLPTT 1282
T ++ T + G + + T
Sbjct: 680 PNPNATSPSAPSGQKTAVPTVTSTGGKANSTTKET 714
Score = 32.4 bits (73), Expect = 2.1
Identities = 71/364 (19%), Positives = 104/364 (28%), Gaps = 16/364 (4%)
Query: 250 TPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYP 309
P+ T T+ P T P ++ + T+ T PT + P
Sbjct: 425 APDTTKSVIFVYTLVHVEPHKTTAVPTTPSLPPASTGPTVS-TADPTSGTPTGTTSSTLP 483
Query: 310 EGTTVTQPTPEGTIKYPEGTTVTQP---TPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVT 366
E T+ T T T T T T K + T PTP G T T
Sbjct: 484 EDTSPTSRTTSATPNATSPTPAVTTPNATSPTTQKTSDTPNATSPTPIVI-----GVTTT 538
Query: 367 QPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIK 426
+P T Q T E + VT T G T +P
Sbjct: 539 ATSPPTGTTSVPNATSPQVTEESPVNNTNTPVVTSAPSVLTSAVTTGQHGTGSSPTSQQP 598
Query: 427 YPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTT--V 484
++ + P T P T+ E + T + GTT V
Sbjct: 599 GIPSSSHSTPRSNSTSTTPLLTSAHPTGGENITEETPSVPSTTHVSTLSPGPGPGTTSQV 658
Query: 485 TQPTPEGTTTYPERTTVTQPTPESTTKYPEGTTVTQPTPEGTTKYPEG-----TTVTQPT 539
+ P T+ YP VT+ P P + + T + T
Sbjct: 659 SGPGNSSTSRYPGEVHVTEGMPNPNATSPSAPSGQKTAVPTVTSTGGKANSTTKETSGST 718
Query: 540 SEGTTKYPEGTTVTQPTPEGTTKYPEGTTVTQPTSEGTTKYPEGTTVTQPTPEGTTKYPE 599
+T + TP T Y +T ++ T P TT P T++P+
Sbjct: 719 LMASTSPHTNEGAFRTTPYNATTYLPPSTSSKLRPRWTFTSPPVTTKQATVPVPPTQHPD 778
Query: 600 GTTK 603
+
Sbjct: 779 HSNL 782
Score = 31.3 bits (70), Expect = 4.8
Identities = 54/235 (22%), Positives = 76/235 (32%), Gaps = 10/235 (4%)
Query: 1067 TKYPEGTTKYPEGTTVTEPTPEGTTKYPEGTTKYPEGT--TKYTEGTTGTKPTPEGKTKY 1124
K P+ T T+ P TT P + P T T T T PT +
Sbjct: 423 HKAPDTTKSVIFVYTLVHVEPHKTTAVPTTPSLPPASTGPTVSTADPTSGTPTGTTSSTL 482
Query: 1125 PEGTTVTQPTPEGTTKYPEGTAVTQPTPEGTTKYSEGTTVTQPTPEGTTKYPEGTTVTQP 1184
PE T+ T T T T TP T+ ++ T+ T T TT
Sbjct: 483 PEDTSPTSRTTSATPNATSPTPAV-TTPNATSPTTQKTSDTPNATSPTPIVIGVTTTATS 541
Query: 1185 TPEGTTKYPEGTTVTQPTPEGTTKYPEGTSVTQPTPEGTTKYPELTTIT------QPTPE 1238
P GTT P T+ + P+ + QP
Sbjct: 542 PPTGTTSVPNATSPQVTEESPVNNTNTPVVTSAPSVLTSAVTTGQHGTGSSPTSQQPGIP 601
Query: 1239 GTTKYPEGTSVTQPTPEGTTKYP-ESTTITQPTLEGPSITHLPTTGTTRYPDFTT 1292
++ ++ T TP T+ +P IT+ T PS TH+ T P T+
Sbjct: 602 SSSHSTPRSNSTSTTPLLTSAHPTGGENITEETPSVPSTTHVSTLSPGPGPGTTS 656
Score = 30.9 bits (69), Expect = 6.7
Identities = 75/365 (20%), Positives = 108/365 (29%), Gaps = 16/365 (4%)
Query: 182 TPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYP 241
P+ T T+ P T P ++ + T+ T PT + P
Sbjct: 425 APDTTKSVIFVYTLVHVEPHKTTAVPTTPSLPPASTGPTVS-TADPTSGTPTGTTSSTLP 483
Query: 242 EGTTVTQPTPEGTIKYPEGTTVTQP---TPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVT 298
E T+ T T T T T T K + T PTP G T T
Sbjct: 484 EDTSPTSRTTSATPNATSPTPAVTTPNATSPTTQKTSDTPNATSPTPIVI-----GVTTT 538
Query: 299 QPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIK 358
+P T Q T E + VT T G T +P
Sbjct: 539 ATSPPTGTTSVPNATSPQVTEESPVNNTNTPVVTSAPSVLTSAVTTGQHGTGSSPTSQQP 598
Query: 359 YPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTT--V 416
++ + P T P T+ E + T + GTT V
Sbjct: 599 GIPSSSHSTPRSNSTSTTPLLTSAHPTGGENITEETPSVPSTTHVSTLSPGPGPGTTSQV 658
Query: 417 TQPTPEGTIKYPEGTTVTQPTPEGTIKYPEG-----TTVTQPTPEGTIKYPEGTTVTQPT 471
+ P T +YP VT+ P P T V T G + T
Sbjct: 659 SGPGNSSTSRYPGEVHVTEGMPNPNATSPSAPSGQKTAVPTVTSTGGKANSTTKETSGST 718
Query: 472 PEGTIKYPEGTTVTQPTPEGTTTYPERTTVTQPTPESTTKYPEGTTVTQPTPEGTTKYPE 531
+ + TP TTY +T ++ P T P TT P T++P+
Sbjct: 719 LMASTSPHTNEGAFRTTPYNATTYLPPSTSSKLRPRWTFTSPPVTTKQATVPVPPTQHPD 778
Query: 532 GTTVT 536
+ ++
Sbjct: 779 HSNLS 783
Score = 30.5 bits (68), Expect = 7.1
Identities = 70/345 (20%), Positives = 101/345 (29%), Gaps = 14/345 (4%)
Query: 233 TPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYP 292
P+ T T+ P T P ++ + T+ T PT + P
Sbjct: 425 APDTTKSVIFVYTLVHVEPHKTTAVPTTPSLPPASTGPTVS-TADPTSGTPTGTTSSTLP 483
Query: 293 EGTTVTQPTPEGTIKYPEGTTVTQP---TPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVT 349
E T+ T T T T T T K + T PTP G T T
Sbjct: 484 EDTSPTSRTTSATPNATSPTPAVTTPNATSPTTQKTSDTPNATSPTPIVI-----GVTTT 538
Query: 350 QPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIK 409
+P T Q T E + VT T G T +P
Sbjct: 539 ATSPPTGTTSVPNATSPQVTEESPVNNTNTPVVTSAPSVLTSAVTTGQHGTGSSPTSQQP 598
Query: 410 YPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTT--V 467
++ + P T P T+ E + T + GTT V
Sbjct: 599 GIPSSSHSTPRSNSTSTTPLLTSAHPTGGENITEETPSVPSTTHVSTLSPGPGPGTTSQV 658
Query: 468 TQPTPEGTIKYPEGTTVTQPTPEGTTTYPERTTVTQPTPESTTKYPEGTTVTQPTPEGTT 527
+ P T +YP VT+ P T P + + + T T G+T
Sbjct: 659 SGPGNSSTSRYPGEVHVTEGMPNPNATSPSAPSGQKTAVPTVTSTGGKANSTTKETSGST 718
Query: 528 KYPEGTTVTQPTSEGTTKYPEGTTVTQPTPEGTTKYPEGTTVTQP 572
+ + T+EG + T P ++K T T P
Sbjct: 719 L---MASTSPHTNEGAFRTTPYNATTYLPPSTSSKLRPRWTFTSP 760
Score = 30.5 bits (68), Expect = 7.3
Identities = 70/349 (20%), Positives = 101/349 (28%), Gaps = 13/349 (3%)
Query: 335 TPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYP 394
P+ T T+ P T P ++ + T+ T PT + P
Sbjct: 425 APDTTKSVIFVYTLVHVEPHKTTAVPTTPSLPPASTGPTVS-TADPTSGTPTGTTSSTLP 483
Query: 395 EGTTVTQPTPEGTIKYPEGTTVTQP---TPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVT 451
E T+ T T T T T T K + T PTP G T T
Sbjct: 484 EDTSPTSRTTSATPNATSPTPAVTTPNATSPTTQKTSDTPNATSPTPIVI-----GVTTT 538
Query: 452 QPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTTTYPERTTVTQPTPESTTK 511
+P T Q T E + VT T+ T +P S
Sbjct: 539 ATSPPTGTTSVPNATSPQVTEESPVNNTNTPVVTSAPSVLTSAVTTGQHGTGSSPTSQQP 598
Query: 512 YPEGTTVTQPTPEGTTKYPEGTTVTQPTSEGTTKYPEGTTVTQPTPEGTTKYPEGTT--V 569
++ + P T+ P T+ E T+ T + GTT V
Sbjct: 599 GIPSSSHSTPRSNSTSTTPLLTSAHPTGGENITEETPSVPSTTHVSTLSPGPGPGTTSQV 658
Query: 570 TQPTSEGTTKYPEGTTVTQPTPEGTTKYPEGTTKYPEGT-TVTQPTSEGTTKYPEGTTVT 628
+ P + T++YP VT+ P P + TVT + + E + T
Sbjct: 659 SGPGNSSTSRYPGEVHVTEGMPNPNATSPSAPSGQKTAVPTVTSTGGKANSTTKETSGST 718
Query: 629 QPTP-EGTTKYPEGTTKYPEGTTVTQPTPEGTTKYSEGTTEYPEGTTVT 676
T T TT P+ + T P T
Sbjct: 719 LMASTSPHTNEGAFRTTPYNATTYLPPSTSSKLRPRWTFTSPPVTTKQA 767
>gnl|CDD|236669 PRK10263, PRK10263, DNA translocase FtsK; Provisional.
Length = 1355
Score = 35.8 bits (82), Expect = 0.23
Identities = 45/223 (20%), Positives = 62/223 (27%), Gaps = 16/223 (7%)
Query: 277 GTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTP 336
G TQP + G +T+P TT TQ P T +
Sbjct: 296 GNRATQPEYDEYDPLLNGAPITEPVAVAAA----ATTATQSWAAPV--EPVTQTPPVASV 349
Query: 337 EGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEG 396
+ P P P+ G V P PEG YP+ + QP + +
Sbjct: 350 DVPPAQPTVAWQPVPGPQ------TGEPVIAPAPEG---YPQQSQYAQPAVQYNEPLQQP 400
Query: 397 TTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPE-GTTVTQPTPEGTIKYPEGTTVTQPTP 455
QP + P P PE + P QP + E + P
Sbjct: 401 VQPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQS 460
Query: 456 EGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTTTYPER 498
+ Q + E V +P P T P R
Sbjct: 461 TYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPVVEETKPAR 503
Score = 34.3 bits (78), Expect = 0.56
Identities = 43/215 (20%), Positives = 61/215 (28%), Gaps = 16/215 (7%)
Query: 379 GTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTP 438
G TQP + G +T+P TT TQ P T +
Sbjct: 296 GNRATQPEYDEYDPLLNGAPITEPVAVAAA----ATTATQSWAAPV--EPVTQTPPVASV 349
Query: 439 EGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTTTYPER 498
+ P P P+ G V P PEG YP+ + QP + +
Sbjct: 350 DVPPAQPTVAWQPVPGPQ------TGEPVIAPAPEG---YPQQSQYAQPAVQYNEPLQQP 400
Query: 499 TTVTQPTPESTTKYPEGTTVTQPTPEGTTKYPE-GTTVTQPTSEGTTKYPEGTTVTQPTP 557
QP + P P PE + P QP + + E + P
Sbjct: 401 VQPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQS 460
Query: 558 EGTTKYPEGTTVTQPTSEGTTKYPEGTTVTQPTPE 592
T+ Q + E V +P P
Sbjct: 461 TYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPV 495
Score = 33.9 bits (77), Expect = 0.76
Identities = 26/130 (20%), Positives = 36/130 (27%), Gaps = 4/130 (3%)
Query: 1127 GTTVTQPTPEGTTKYPEGTAVTQPTPEGTTKYSEGTTVTQPTPEGTTKYPEGTTVTQPTP 1186
G V P PEG + + QP + + QP + P P P
Sbjct: 369 GEPVIAPAPEGYPQQSQ---YAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQQPYYAPAP 425
Query: 1187 EGTTKYPE-GTTVTQPTPEGTTKYPEGTSVTQPTPEGTTKYPELTTITQPTPEGTTKYPE 1245
E + P QP + E S P T+ Q + E
Sbjct: 426 EQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQPVE 485
Query: 1246 GTSVTQPTPE 1255
V +P P
Sbjct: 486 QQPVVEPEPV 495
Score = 33.1 bits (75), Expect = 1.2
Identities = 44/219 (20%), Positives = 62/219 (28%), Gaps = 16/219 (7%)
Query: 1 MLGSPCRVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVT 60
+L S R TQP + G +T+P TT TQ P T
Sbjct: 292 VLFSGNRATQPEYDEYDPLLNGAPITEPVAVAAA----ATTATQSWAAPV--EPVTQTPP 345
Query: 61 QPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIK 120
+ + P P P+ G V P PEG YP+ + QP +
Sbjct: 346 VASVDVPPAQPTVAWQPVPGPQ------TGEPVIAPAPEG---YPQQSQYAQPAVQYNEP 396
Query: 121 YPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPE-GTTVTQPTPEGTIKYPEGTTVT 179
+ QP + P P PE + P QP + E +
Sbjct: 397 LQQPVQPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTF 456
Query: 180 QPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPE 218
P + Q + E V +P P
Sbjct: 457 APQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPV 495
Score = 32.4 bits (73), Expect = 2.3
Identities = 42/215 (19%), Positives = 59/215 (27%), Gaps = 16/215 (7%)
Query: 22 GTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTP 81
G TQP + G +T+P TT TQ P T +
Sbjct: 296 GNRATQPEYDEYDPLLNGAPITEPVAVAAA----ATTATQSWAAPV--EPVTQTPPVASV 349
Query: 82 EGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEG 141
+ P P P+ G V P PEG YP+ + QP + +
Sbjct: 350 DVPPAQPTVAWQPVPGPQ------TGEPVIAPAPEG---YPQQSQYAQPAVQYNEPLQQP 400
Query: 142 TTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPE-GTTVTQPTPEGTIKYPEGTTVTQPTP 200
QP + P P PE + P QP + E + P
Sbjct: 401 VQPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQS 460
Query: 201 EGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPE 235
+ Q + E V +P P
Sbjct: 461 TYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPV 495
Score = 32.4 bits (73), Expect = 2.3
Identities = 42/215 (19%), Positives = 59/215 (27%), Gaps = 16/215 (7%)
Query: 39 GTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTP 98
G TQP + G +T+P TT TQ P T +
Sbjct: 296 GNRATQPEYDEYDPLLNGAPITEPVAVAAA----ATTATQSWAAPV--EPVTQTPPVASV 349
Query: 99 EGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEG 158
+ P P P+ G V P PEG YP+ + QP + +
Sbjct: 350 DVPPAQPTVAWQPVPGPQ------TGEPVIAPAPEG---YPQQSQYAQPAVQYNEPLQQP 400
Query: 159 TTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPE-GTTVTQPTPEGTIKYPEGTTVTQPTP 217
QP + P P PE + P QP + E + P
Sbjct: 401 VQPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQS 460
Query: 218 EGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPE 252
+ Q + E V +P P
Sbjct: 461 TYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPV 495
Score = 32.4 bits (73), Expect = 2.3
Identities = 42/215 (19%), Positives = 59/215 (27%), Gaps = 16/215 (7%)
Query: 56 GTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTP 115
G TQP + G +T+P TT TQ P T +
Sbjct: 296 GNRATQPEYDEYDPLLNGAPITEPVAVAAA----ATTATQSWAAPV--EPVTQTPPVASV 349
Query: 116 EGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEG 175
+ P P P+ G V P PEG YP+ + QP + +
Sbjct: 350 DVPPAQPTVAWQPVPGPQ------TGEPVIAPAPEG---YPQQSQYAQPAVQYNEPLQQP 400
Query: 176 TTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPE-GTTVTQPTPEGTIKYPEGTTVTQPTP 234
QP + P P PE + P QP + E + P
Sbjct: 401 VQPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQS 460
Query: 235 EGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPE 269
+ Q + E V +P P
Sbjct: 461 TYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPV 495
Score = 32.4 bits (73), Expect = 2.3
Identities = 42/215 (19%), Positives = 59/215 (27%), Gaps = 16/215 (7%)
Query: 73 GTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTP 132
G TQP + G +T+P TT TQ P T +
Sbjct: 296 GNRATQPEYDEYDPLLNGAPITEPVAVAAA----ATTATQSWAAPV--EPVTQTPPVASV 349
Query: 133 EGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEG 192
+ P P P+ G V P PEG YP+ + QP + +
Sbjct: 350 DVPPAQPTVAWQPVPGPQ------TGEPVIAPAPEG---YPQQSQYAQPAVQYNEPLQQP 400
Query: 193 TTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPE-GTTVTQPTPEGTIKYPEGTTVTQPTP 251
QP + P P PE + P QP + E + P
Sbjct: 401 VQPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQS 460
Query: 252 EGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPE 286
+ Q + E V +P P
Sbjct: 461 TYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPV 495
Score = 32.4 bits (73), Expect = 2.3
Identities = 42/215 (19%), Positives = 59/215 (27%), Gaps = 16/215 (7%)
Query: 90 GTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTP 149
G TQP + G +T+P TT TQ P T +
Sbjct: 296 GNRATQPEYDEYDPLLNGAPITEPVAVAAA----ATTATQSWAAPV--EPVTQTPPVASV 349
Query: 150 EGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEG 209
+ P P P+ G V P PEG YP+ + QP + +
Sbjct: 350 DVPPAQPTVAWQPVPGPQ------TGEPVIAPAPEG---YPQQSQYAQPAVQYNEPLQQP 400
Query: 210 TTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPE-GTTVTQPTPEGTIKYPEGTTVTQPTP 268
QP + P P PE + P QP + E + P
Sbjct: 401 VQPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQS 460
Query: 269 EGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPE 303
+ Q + E V +P P
Sbjct: 461 TYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPV 495
Score = 32.4 bits (73), Expect = 2.3
Identities = 42/215 (19%), Positives = 59/215 (27%), Gaps = 16/215 (7%)
Query: 107 GTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTP 166
G TQP + G +T+P TT TQ P T +
Sbjct: 296 GNRATQPEYDEYDPLLNGAPITEPVAVAAA----ATTATQSWAAPV--EPVTQTPPVASV 349
Query: 167 EGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEG 226
+ P P P+ G V P PEG YP+ + QP + +
Sbjct: 350 DVPPAQPTVAWQPVPGPQ------TGEPVIAPAPEG---YPQQSQYAQPAVQYNEPLQQP 400
Query: 227 TTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPE-GTTVTQPTPEGTIKYPEGTTVTQPTP 285
QP + P P PE + P QP + E + P
Sbjct: 401 VQPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQS 460
Query: 286 EGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPE 320
+ Q + E V +P P
Sbjct: 461 TYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPV 495
>gnl|CDD|226406 COG3889, COG3889, Predicted solute binding protein [General
function prediction only].
Length = 872
Score = 35.6 bits (82), Expect = 0.24
Identities = 28/163 (17%), Positives = 43/163 (26%), Gaps = 5/163 (3%)
Query: 636 TKYPEGTTKYPEGTTVTQPTPEGTTKYSEGTTEYPEGTTVTRPTPEGTTKYSEG-TTEYP 694
P G Y + + TT+
Sbjct: 692 RDPPVGWLPYTNSLYKATTLSSEAKNPDTVKIGQALTVYGSLEVFPAGENWGFIPTTKRV 751
Query: 695 EGTTKYPEGATVTQPTPEGTTKYPEGTTVTQPTPEGTLKYPEGTTKYPEGTTKYPEGTTA 754
+ P T T T GT + T+ + T+ E T+ T
Sbjct: 752 KVRIMDPASGTGTSITTSGTFTAEVPQSPTKTETTLSYSAYSNTSILIETTSVVITKTVT 811
Query: 755 TQPTPEGTTKYPRGTTVTQPTPQVTTKYPEGTTQTQTTPEGTI 797
T + + T+ TQ + TT T+ +QTT G I
Sbjct: 812 QTQTTTSSPSPTQTTSPTQTSTSTTT----TTSPSQTTTGGGI 850
Score = 35.2 bits (81), Expect = 0.31
Identities = 28/154 (18%), Positives = 45/154 (29%), Gaps = 8/154 (5%)
Query: 444 YPEGTTVTQPTPEGTIKYPEGTTVTQP-TPEGTIKYPEGTTVTQ--PTPEGTTTYPERTT 500
Y K P+ + Q T G+++ PT +
Sbjct: 701 YTNSLYKATTLSSEA-KNPDTVKIGQALTVYGSLEVFPAGENWGFIPTTKRVKVRIMDPA 759
Query: 501 VTQPTPESTTKYPEGTTVTQPTPEGTTKYPEGTTVTQPTSEGTTKYPEGTTVTQPTPEGT 560
T +T+ PT TT + T E T+ T T +
Sbjct: 760 SGTGTSITTSGTFTAEVPQSPTKTETTLSYSAYSNTSILIETTSVVITKTVTQTQTTTSS 819
Query: 561 TKYPEGTTVTQPTSEGTTKYPEGTTVTQPTPEGT 594
+ T+ TQ ++ TT T+ +Q T G
Sbjct: 820 PSPTQTTSPTQTSTSTTT----TTSPSQTTTGGG 849
Score = 34.5 bits (79), Expect = 0.51
Identities = 24/112 (21%), Positives = 33/112 (29%), Gaps = 4/112 (3%)
Query: 1112 TGTKPTPEGKTKYPEGTTVTQPTPEGTTKYPEGTAVTQPTPEGTTKYSEGTTVTQPTPEG 1171
G PT + T T+ PT TT + T E
Sbjct: 742 WGFIPTTKRVKVRIMDPASGTGTSITTSGTFTAEVPQSPTKTETTLSYSAYSNTSILIET 801
Query: 1172 TTKYPEGTTVTQPTPEGTTKYPEGTTVTQPTPEGTTKYPEGTSVTQPTPEGT 1223
T+ T T + + T+ TQ + TT TS +Q T G
Sbjct: 802 TSVVITKTVTQTQTTTSSPSPTQTTSPTQTSTSTTT----TTSPSQTTTGGG 849
Score = 33.7 bits (77), Expect = 0.94
Identities = 33/162 (20%), Positives = 45/162 (27%), Gaps = 4/162 (2%)
Query: 1118 PEGKTKYPEGTTVTQPTPEGTTKYPEGTAVTQP-TPEGTTKYSEGTTVTQ--PTPEGTTK 1174
P G Y K P+ + Q T G+ + PT +
Sbjct: 695 PVGWLPYTNSLYKATTLSSEA-KNPDTVKIGQALTVYGSLEVFPAGENWGFIPTTKRVKV 753
Query: 1175 YPEGTTVTQPTPEGTTKYPEGTTVTQPTPEGTTKYPEGTSVTQPTPEGTTKYPELTTITQ 1234
T T+ PT TT S T E T+ T
Sbjct: 754 RIMDPASGTGTSITTSGTFTAEVPQSPTKTETTLSYSAYSNTSILIETTSVVITKTVTQT 813
Query: 1235 PTPEGTTKYPEGTSVTQPTPEGTTKYPESTTITQPTLEGPSI 1276
T + + TS TQ + TT S T T + GP +
Sbjct: 814 QTTTSSPSPTQTTSPTQTSTSTTTTTSPSQTTTGGGICGPIV 855
Score = 32.5 bits (74), Expect = 1.7
Identities = 28/154 (18%), Positives = 45/154 (29%), Gaps = 8/154 (5%)
Query: 427 YPEGTTVTQPTPEGTIKYPEGTTVTQP-TPEGTIKYPEGTTVTQ--PTPEGTIKYPEGTT 483
Y K P+ + Q T G+++ PT +
Sbjct: 701 YTNSLYKATTLSSEA-KNPDTVKIGQALTVYGSLEVFPAGENWGFIPTTKRVKVRIMDPA 759
Query: 484 VTQPTPEGTTTYPERTTVTQPTPESTTKYPEGTTVTQPTPEGTTKYPEGTTVTQPTSEGT 543
T T+ PT TT + T E T+ T T+ +
Sbjct: 760 SGTGTSITTSGTFTAEVPQSPTKTETTLSYSAYSNTSILIETTSVVITKTVTQTQTTTSS 819
Query: 544 TKYPEGTTVTQPTPEGTTKYPEGTTVTQPTSEGT 577
+ T+ TQ + TT T+ +Q T+ G
Sbjct: 820 PSPTQTTSPTQTSTSTTT----TTSPSQTTTGGG 849
Score = 32.1 bits (73), Expect = 2.6
Identities = 28/154 (18%), Positives = 44/154 (28%), Gaps = 8/154 (5%)
Query: 410 YPEGTTVTQPTPEGTIKYPEGTTVTQP-TPEGTIKYPEGTTVTQ--PTPEGTIKYPEGTT 466
Y K P+ + Q T G+++ PT +
Sbjct: 701 YTNSLYKATTLSSEA-KNPDTVKIGQALTVYGSLEVFPAGENWGFIPTTKRVKVRIMDPA 759
Query: 467 VTQPTPEGTIKYPEGTTVTQPTPEGTTTYPERTTVTQPTPESTTKYPEGTTVTQPTPEGT 526
T T PT TT + T E+T+ T T +
Sbjct: 760 SGTGTSITTSGTFTAEVPQSPTKTETTLSYSAYSNTSILIETTSVVITKTVTQTQTTTSS 819
Query: 527 TKYPEGTTVTQPTSEGTTKYPEGTTVTQPTPEGT 560
+ T+ TQ ++ TT T+ +Q T G
Sbjct: 820 PSPTQTTSPTQTSTSTTT----TTSPSQTTTGGG 849
Score = 30.6 bits (69), Expect = 8.4
Identities = 28/145 (19%), Positives = 40/145 (27%), Gaps = 8/145 (5%)
Query: 802 ETTKYPEGTTVTQPTPEGTTKYPEGTTKYPEGTTGTQPTPEGTTKYPEGTTVTHPTPEGT 861
K P+ + Q T Y G PT + T T
Sbjct: 713 SEAKNPDTVKIGQAL----TVYGSLEVFPAGENWGFIPTTKRVKVRIMDPASGTGTSITT 768
Query: 862 TKYPEGTTVTQPTPEGTIKYPEGITVTQPTPEGTTTYPEGTTVIQTTPEGTTKYPEGTTV 921
+ PT T + T E T+ T T + + T+
Sbjct: 769 SGTFTAEVPQSPTKTETTLSYSAYSNTSILIETTSVVITKTVTQTQTTTSSPSPTQTTSP 828
Query: 922 TQPTPEGTTKYPEGTTVTQPTLGGT 946
TQ + TT T+ +Q T GG
Sbjct: 829 TQTSTSTTT----TTSPSQTTTGGG 849
Score = 30.2 bits (68), Expect = 8.5
Identities = 30/148 (20%), Positives = 45/148 (30%), Gaps = 10/148 (6%)
Query: 746 TKYPEGTTATQP-----TPEGTTKYPRGTTVTQPT-PQVTTKYPEGTTQTQTTPEGTIKY 799
K P+ Q + E + +V P T T T GT
Sbjct: 715 AKNPDTVKIGQALTVYGSLEVFPAGENWGFIPTTKRVKVRIMDPASGTGTSITTSGTFTA 774
Query: 800 PEETTKYPEGTTVTQPTPEGTTKYPEGTTKYPEGTTGTQPTPEGTTKYPEGTTVTHPTPE 859
+ TT++ T+ E T+ T T + + T+ T +
Sbjct: 775 EVPQSPTKTETTLSYSAYSNTSILIETTSVVITKTVTQTQTTTSSPSPTQTTSPTQTSTS 834
Query: 860 GTTKYPEGTTVTQPTPEGTIKYPEGITV 887
TT T+ +Q T G I P I V
Sbjct: 835 TTT----TTSPSQTTTGGGICGPIVIIV 858
>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional.
Length = 3151
Score = 34.5 bits (79), Expect = 0.56
Identities = 55/402 (13%), Positives = 80/402 (19%), Gaps = 39/402 (9%)
Query: 521 PTPEGTTKYPEGTTVTQPTSEGTTKYPEGTTVTQPTPEG----TTKYPEGTTVTQPTSEG 576
P + P + P T P P + T P E
Sbjct: 2592 PPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPER 2651
Query: 577 TTKYPEGTTVTQPTPEGTTKYPEGTTKYPEGTTVTQPTSEGTTKYPEGTTVTQPTPEGTT 636
P V++P + P+ + T + P P T
Sbjct: 2652 PRDDPAPGRVSRPRRARRLGRAAQASSPPQRPR---RRAARPTVGSLTSLADPPPPPPTP 2708
Query: 637 KYPEGTTKYPEGTTVTQPTPEGTTKYSEGTTEYPEGTTVTRPTPEGTTKYSEGTTEYPEG 696
+ P P P G + + P G P G
Sbjct: 2709 EPA------PHALVSATPLPPGPAA-ARQASPALPAAPAPPAVPAGPAT--------PGG 2753
Query: 697 TTKYPEGATVTQPTPEGTTKYPEGTTVTQPTPEGTLKYPEGTTKYPEGTTKYPEGTTATQ 756
+ T P P + T E P
Sbjct: 2754 PARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLA 2813
Query: 757 PTP-EGTTKYPRGTTVTQPTPQ-VTTKYPEGTTQTQTTPEGTIKYPEETTKYPEGTTVTQ 814
P P G + Q P G G++ P G +
Sbjct: 2814 PAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVA--------PGGDVRRR 2865
Query: 815 PTPEGTTKYPEGTTKYPEGTTGTQPTPEGTTKYPEGTTVTHPTPEGTTKYPEGTTVTQPT 874
P P + P T + P+ + P+ P
Sbjct: 2866 PPSRSPAAKPAAPARPPVRRLARPAVSRSTESFAL-------PPDQPERPPQPQAPPPPQ 2918
Query: 875 PEGTIKYPEGITVTQPTPEGTTTYPEGTTVIQTTPEGTTKYP 916
P+ P P P TT E + P
Sbjct: 2919 PQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVP 2960
Score = 33.8 bits (77), Expect = 0.96
Identities = 50/366 (13%), Positives = 78/366 (21%), Gaps = 21/366 (5%)
Query: 452 QPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTTTYPERTTVTQPTPESTTK 511
P+P + P+P + T P PE P V++P
Sbjct: 2613 PPSPLPPDTHAPDPPPPSPSPAAN-EPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLG 2671
Query: 512 YPEGTTVTQPTPEGTTKYPEGTTVTQPTSEGTTKYPEGTTVTQPTPEGTTKYPEGTTVTQ 571
+ P+ + TV TS P T P P
Sbjct: 2672 RAAQAS---SPPQRPRRRAARPTVGSLTSLADPPPPPPT----PEPAPHALVSATPLPPG 2724
Query: 572 PTSEGTTKYPEGTTVTQPTPEGTTKYPEGTTKYPEGTTVTQPTSEGTTKYPEGTTVTQPT 631
P + P P G + T P + P + T
Sbjct: 2725 PAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLT 2784
Query: 632 PEGTTKYPEGTTKYPEGTTVTQPTPEGTTKYSEGTTEYPEGTTVTRPTPEGTTKYSEGTT 691
E P P + + P P +
Sbjct: 2785 RPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPL--PPPTSAQPTAPPPP 2842
Query: 692 EYPEGTTKYPEGATVTQPTPEGTTKYPEGTTVTQPTPEGTLKYPEGTTKYPEGTTKYPEG 751
P + G+ P G +P P + P P
Sbjct: 2843 PGPPPPSLPLGGSVA-----------PGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAV 2891
Query: 752 TTATQPTPEGTTKYPRGTTVTQPTPQVTTKYPEGTTQTQTTPEGTIKYPEETTKYPEGTT 811
+ +T+ + R P P P Q Q P + +
Sbjct: 2892 SRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAG 2951
Query: 812 VTQPTP 817
+P+
Sbjct: 2952 AGEPSG 2957
Score = 33.0 bits (75), Expect = 1.5
Identities = 48/328 (14%), Positives = 75/328 (22%), Gaps = 9/328 (2%)
Query: 333 QPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIK 392
P+P + P+P + T P PE P V++P +
Sbjct: 2613 PPSPLPPDTHAPDPPPPSPSPAAN-EPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLG 2671
Query: 393 YPEGTTVTQPTPEGTIKYPEGTTVT---QPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTT 449
+ P P ++T P P P + TP
Sbjct: 2672 RAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQA 2731
Query: 450 VTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTTTYPERTTVTQPTPEST 509
T P + P P P +T+P S
Sbjct: 2732 SPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASL 2791
Query: 510 TKYPEGTTVTQPTPEGTTKYPEGTTVTQPTSEGTTKYPEGTTVTQPTPEGTTKYPEGTTV 569
++ + + P+P P P G + + T P
Sbjct: 2792 SE----SRESLPSPWDPADPPAAVLAPAAA-LPPAASPAGPLPPPTSAQPTAPPPPPGPP 2846
Query: 570 TQPTSEGTTKYPEGTTVTQPTPEGTTKYPEGTTKYPEGTTVTQPTSEGTTKYPEGTTVTQ 629
G + P G +P P + P S T + +
Sbjct: 2847 PPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPE 2906
Query: 630 PTPEGTTKYPEGTTKYPEGTTVTQPTPE 657
P+ P P QP P
Sbjct: 2907 RPPQPQAPPPPQPQPQPPPPPQPQPPPP 2934
Score = 33.0 bits (75), Expect = 1.5
Identities = 56/359 (15%), Positives = 84/359 (23%), Gaps = 22/359 (6%)
Query: 3 GSPCRVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQP 62
G P P+P + P+P + T P PE P V++P
Sbjct: 2606 GDPRGPAPPSPLPPDTHAPDPPPPSPSPAAN-EPDPHPPPTVPPPERPRDDPAPGRVSRP 2664
Query: 63 TPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQ-----PTPEGTIKYPEGTTVTQPTPEG 117
+ + P P ++T P P P P P G
Sbjct: 2665 RRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPG 2724
Query: 118 TIKY------PEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIK 171
P G +P P P +
Sbjct: 2725 PAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLT 2784
Query: 172 YPEGTTVTQPT---PEGTIKYPEGTTVTQPTP-EGTIKYPEGTTVTQPTPEGTIKYPEGT 227
P ++++ P V P P G + + T P
Sbjct: 2785 RPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPG 2844
Query: 228 TVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQP---T 284
P G P G +P P +P P + P + T+
Sbjct: 2845 PPPPSLPLGGSVAPGGDVRRRPPSRSPAAKP--AAPARP-PVRRLARPAVSRSTESFALP 2901
Query: 285 PEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYP 343
P+ + P+ P P+ P P P TT E + P
Sbjct: 2902 PDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVP 2960
>gnl|CDD|213240 cd03273, ABC_SMC2_euk, ATP-binding cassette domain of eukaryotic SMC2
proteins. The structural maintenance of chromosomes
(SMC) proteins are large (approximately 110 to 170 kDa),
and each is arranged into five recognizable domains.
Amino-acid sequence homology of SMC proteins between
species is largely confined to the amino- and
carboxy-terminal globular domains. The amino-terminal
domain contains a 'Walker A' nucleotide-binding domain
(GxxGxGKS/T, in the single-letter amino-acid code), which
by mutational studies has been shown to be essential in
several proteins. The carboxy-terminal domain contains a
sequence (the DA-box) that resembles a 'Walker B' motif,
and a motif with homology to the signature sequence of
the ATP-binding cassette (ABC) family of ATPases. The
sequence homology within the carboxy-terminal domain is
relatively high within the SMC1-SMC4 group, whereas SMC5
and SMC6 show some divergence in both of these sequences.
In eukaryotic cells, the proteins are found as
heterodimers of SMC1 paired with SMC3, SMC2 with SMC4,
and SMC5 with SMC6 (formerly known as Rad18).
Length = 251
Score = 33.4 bits (77), Expect = 0.56
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 7/49 (14%)
Query: 980 YPEGTT-VTQATPEGTF------KYPEGTTNYPEGTTVTQPTLGGTTKY 1021
Y G +T+A+ F + P G NYPE T Q LGGT KY
Sbjct: 67 YKRGQAGITKASVTIVFDNSDKSQSPIGFENYPEITVTRQIVLGGTNKY 115
>gnl|CDD|183506 PRK12406, PRK12406, long-chain-fatty-acid--CoA ligase; Provisional.
Length = 509
Score = 33.9 bits (78), Expect = 0.63
Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 5/59 (8%)
Query: 791 TTPEGTIKYPE--ETTKYPEGTTVTQPTPEGTTKYPEGTTKYPEGTTGTQPTPEGTTKY 847
T P G I + + +G V QP + Y GTT +P+G PTPE
Sbjct: 128 TPPAGAIDWEGWLAQQEPYDGPPVPQP---QSMIYTSGTTGHPKGVRRAAPTPEQAAAA 183
Score = 32.0 bits (73), Expect = 2.8
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Query: 873 PTPEGTIKYPEGITVTQPTPEGTTTYPEGTTVIQTTPEGTTKYPEGTTVTQPTPEGTTKY 932
P G I + EG Q +G P+ ++I T+ GTT +P+G PTPE
Sbjct: 128 TPPAGAIDW-EGWLAQQEPYDGPPV-PQPQSMIYTS--GTTGHPKGVRRAAPTPEQAAAA 183
Score = 31.2 bits (71), Expect = 4.7
Identities = 16/57 (28%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Query: 709 PTPEGTTKYPEGTTVTQPTPEGTLKYPEGTTKYPEGTTKYPEGTTATQPTPEGTTKY 765
P G + EG Q +G + Y GTT +P+G PTPE
Sbjct: 128 TPPAGAIDW-EGWLAQQEPYDGPPVPQPQSMIYTSGTTGHPKGVRRAAPTPEQAAAA 183
>gnl|CDD|224343 COG1426, COG1426, Predicted transcriptional regulator contains
Xre-like HTH domain [Function unknown].
Length = 284
Score = 33.2 bits (76), Expect = 0.84
Identities = 15/96 (15%), Positives = 21/96 (21%)
Query: 651 VTQPTPEGTTKYSEGTTEYPEGTTVTRPTPEGTTKYSEGTTEYPEGTTKYPEGATVTQPT 710
E + + + +T SEGTT + TVT
Sbjct: 126 QAWLAQEEPPTLPDQSVASVSQNSQDVSLATSSTTPSEGTTSASPSSATTSFTPTVTAIA 185
Query: 711 PEGTTKYPEGTTVTQPTPEGTLKYPEGTTKYPEGTT 746
P T QP + K
Sbjct: 186 PVVAPTAKPVTVPKQPAADLAASSTAPAAKEMATGQ 221
Score = 30.9 bits (70), Expect = 3.8
Identities = 15/99 (15%), Positives = 22/99 (22%), Gaps = 3/99 (3%)
Query: 1058 VTQATPEGTTKYPEGTTKYPEGTTVTEPTPEGTTKYPEGTTKYPEGTTKYTEGTTGTKPT 1117
E P+ + + +T EGTT + + T T
Sbjct: 126 QAWLAQEEPPTLPDQSVASVSQNSQDVSLATSSTTPSEGTTSASPSSATTSFTPTVTAIA 185
Query: 1118 PEGKTKYPEGTTVTQPTPEGTTKYPEGTAVTQPTPEGTT 1156
P T QP + TA
Sbjct: 186 PVVAPTAKPVTVPKQPAADLAA---SSTAPAAKEMATGQ 221
Score = 30.1 bits (68), Expect = 7.3
Identities = 16/103 (15%), Positives = 23/103 (22%), Gaps = 2/103 (1%)
Query: 627 VTQPTPEGTTKYPEGTTKYPEGTTVTQPTPEGTTKYSEGTTEYPEGTTVTRPTPEGTTKY 686
E P+ + + +T SEGTT + T TP T
Sbjct: 126 QAWLAQEEPPTLPDQSVASVSQNSQDVSLATSSTTPSEGTTSASPSSATTSFTPTVTAIA 185
Query: 687 SEGTTEYPEGTTKYPEGATVTQPTPEGTTKYPEGTTVTQPTPE 729
P+ E T + P
Sbjct: 186 PVVAPTAKP--VTVPKQPAADLAASSTAPAAKEMATGQEAVPT 226
>gnl|CDD|119328 cd06577, PASTA_pknB, PASTA domain of bacterial serine/threonine
kinase pknB-like proteins. PknB is a member of a group
of related transmembrane sensor kinases present in many
gram positive bacteria, which has been shown to regulate
cell shape in Mycobacterium tubercolosis. PknB is a
receptor-like transmembrane protein with an
extracellular signal sensor domain (containing multiple
PASTA domains) and an intracellular, eukaryotic
serine/threonine kinase-like domain. The PASTA domain is
found at the C-termini of several Penicillin-binding
proteins (PBPs) and bacterial serine/threonine kinases.
The name PASTA is derived from PBP and Serine/Threonine
kinase Associated domain.
Length = 62
Score = 29.4 bits (67), Expect = 1.6
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 884 GITVTQPTPEGTTTYPEGTTVIQTTPEGTTKYPEGTTVT 922
G+ V T E + P+GT VI +P TK +G+TVT
Sbjct: 21 GLKVGVVTEEYSDDVPKGT-VISQSPAAGTKVKKGSTVT 58
>gnl|CDD|233365 TIGR01347, sucB, 2-oxoglutarate dehydrogenase complex
dihydrolipoamide succinyltransferase (E2 component).
This model describes the TCA cycle 2-oxoglutarate system
E2 component, dihydrolipoamide succinyltransferase. It
is closely related to the pyruvate dehydrogenase E2
component, dihydrolipoamide acetyltransferase. The seed
for this model includes mitochondrial and Gram-negative
bacterial forms. Mycobacterial candidates are highly
derived, differ in having and extra copy of the
lipoyl-binding domain at the N-terminus. They score
below the trusted cutoff, but above the noise cutoff and
above all examples of dihydrolipoamide acetyltransferase
[Energy metabolism, TCA cycle].
Length = 403
Score = 32.4 bits (74), Expect = 1.9
Identities = 17/86 (19%), Positives = 24/86 (27%), Gaps = 5/86 (5%)
Query: 442 IKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTTTYPERTTV 501
I + EG TV ++ EG T P + + E T T
Sbjct: 57 ILFKEGDTVESGQVLAILE--EGNDATAAPPAKSGEEKEETPAASAAAAPTA--AANRPS 112
Query: 502 TQPTPESTTKYPEGTTVTQPTPEGTT 527
P K G ++ G T
Sbjct: 113 LSPAARRLAK-EHGIDLSAVPGTGVT 137
>gnl|CDD|139494 PRK13335, PRK13335, superantigen-like protein; Reviewed.
Length = 356
Score = 32.0 bits (72), Expect = 2.3
Identities = 18/87 (20%), Positives = 31/87 (35%)
Query: 1143 EGTAVTQPTPEGTTKYSEGTTVTQPTPEGTTKYPEGTTVTQPTPEGTTKYPEGTTVTQPT 1202
E T+ ++ K E ++ + TT TP+ P T QP
Sbjct: 85 EKTSASKIEKISQPKQEEQKSLNISATPAPKQEQSQTTTESTTPKTKVTTPPSTNTPQPM 144
Query: 1203 PEGTTKYPEGTSVTQPTPEGTTKYPEL 1229
+ P+ ++ Q + T KY +L
Sbjct: 145 QSTKSDTPQSPTIKQAQTDMTPKYEDL 171
Score = 31.6 bits (71), Expect = 2.7
Identities = 24/116 (20%), Positives = 39/116 (33%), Gaps = 3/116 (2%)
Query: 482 TTVTQPTPEGTTTYPERTTVTQPTPESTTKYPEGTTVTQPTPEGTTKYPEGTTVTQPTSE 541
T + T ERT + P + E T+ ++ K E ++ +
Sbjct: 56 AGANSATTQAANTRQERTPKLEKAPNTNE---EKTSASKIEKISQPKQEEQKSLNISATP 112
Query: 542 GTTKYPEGTTVTQPTPEGTTKYPEGTTVTQPTSEGTTKYPEGTTVTQPTPEGTTKY 597
+ TT TP+ P T QP + P+ T+ Q + T KY
Sbjct: 113 APKQEQSQTTTESTTPKTKVTTPPSTNTPQPMQSTKSDTPQSPTIKQAQTDMTPKY 168
Score = 31.2 bits (70), Expect = 3.6
Identities = 19/85 (22%), Positives = 30/85 (35%)
Query: 1159 SEGTTVTQPTPEGTTKYPEGTTVTQPTPEGTTKYPEGTTVTQPTPEGTTKYPEGTSVTQP 1218
E T+ ++ K E ++ + TT TP+ P T+ QP
Sbjct: 84 EEKTSASKIEKISQPKQEEQKSLNISATPAPKQEQSQTTTESTTPKTKVTTPPSTNTPQP 143
Query: 1219 TPEGTTKYPELTTITQPTPEGTTKY 1243
+ P+ TI Q + T KY
Sbjct: 144 MQSTKSDTPQSPTIKQAQTDMTPKY 168
Score = 30.9 bits (69), Expect = 5.0
Identities = 21/113 (18%), Positives = 34/113 (30%)
Query: 1080 TTVTEPTPEGTTKYPEGTTKYPEGTTKYTEGTTGTKPTPEGKTKYPEGTTVTQPTPEGTT 1139
T + E T K + E T+ +K + K E ++
Sbjct: 56 AGANSATTQAANTRQERTPKLEKAPNTNEEKTSASKIEKISQPKQEEQKSLNISATPAPK 115
Query: 1140 KYPEGTAVTQPTPEGTTKYSEGTTVTQPTPEGTTKYPEGTTVTQPTPEGTTKY 1192
+ T TP+ T QP + P+ T+ Q + T KY
Sbjct: 116 QEQSQTTTESTTPKTKVTTPPSTNTPQPMQSTKSDTPQSPTIKQAQTDMTPKY 168
Score = 30.5 bits (68), Expect = 6.0
Identities = 18/84 (21%), Positives = 31/84 (36%)
Query: 463 EGTTVTQPTPEGTIKYPEGTTVTQPTPEGTTTYPERTTVTQPTPESTTKYPEGTTVTQPT 522
E T+ ++ K E ++ +TT TP++ P T QP
Sbjct: 85 EKTSASKIEKISQPKQEEQKSLNISATPAPKQEQSQTTTESTTPKTKVTTPPSTNTPQPM 144
Query: 523 PEGTTKYPEGTTVTQPTSEGTTKY 546
+ P+ T+ Q ++ T KY
Sbjct: 145 QSTKSDTPQSPTIKQAQTDMTPKY 168
Score = 30.1 bits (67), Expect = 8.6
Identities = 19/84 (22%), Positives = 31/84 (36%)
Query: 446 EGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTTTYPERTTVTQPT 505
E T+ ++ K E ++ + TT TP+ T P T QP
Sbjct: 85 EKTSASKIEKISQPKQEEQKSLNISATPAPKQEQSQTTTESTTPKTKVTTPPSTNTPQPM 144
Query: 506 PESTTKYPEGTTVTQPTPEGTTKY 529
+ + P+ T+ Q + T KY
Sbjct: 145 QSTKSDTPQSPTIKQAQTDMTPKY 168
>gnl|CDD|237019 PRK11907, PRK11907, bifunctional 2',3'-cyclic nucleotide
2'-phosphodiesterase/3'-nucleotidase precursor protein;
Reviewed.
Length = 814
Score = 32.1 bits (73), Expect = 2.4
Identities = 17/81 (20%), Positives = 27/81 (33%), Gaps = 1/81 (1%)
Query: 482 TTVTQPTPEGTTTYPERTTVTQPTPESTTKYPEGTTVTQPTPEGTTKYPEGTTVTQPTSE 541
TT + E T P + T+ + T T P+ T + + T+ T+
Sbjct: 33 TTTPATSTEAEQTTPVESDATEEADNTETPVAATTAAEAPSSSETAETSDPTSEATDTTT 92
Query: 542 GTTKYP-EGTTVTQPTPEGTT 561
+ T T EG T
Sbjct: 93 SEARTVTPAATETSKPVEGQT 113
Score = 30.6 bits (69), Expect = 8.1
Identities = 18/85 (21%), Positives = 28/85 (32%), Gaps = 5/85 (5%)
Query: 499 TTVTQPTPESTTKYPEGTTVTQPTPEG----TTKYPEGTTVTQPTSEGTTKYPEGTTVTQ 554
+ TP ++T+ + T V E T T P+S T + + T+
Sbjct: 29 EEIVTTTPATSTEAEQTTPVESDATEEADNTETPVAATTAAEAPSSSETAETSDPTSEAT 88
Query: 555 PTPEGTTKYP-EGTTVTQPTSEGTT 578
T + T T EG T
Sbjct: 89 DTTTSEARTVTPAATETSKPVEGQT 113
Score = 30.2 bits (68), Expect = 9.2
Identities = 17/85 (20%), Positives = 28/85 (32%), Gaps = 5/85 (5%)
Query: 516 TTVTQPTPEGTTKYPEGTTVTQPTSEG----TTKYPEGTTVTQPTPEGTTKYPEGTTVTQ 571
+ TP +T+ + T V +E T T P+ T + + T+
Sbjct: 29 EEIVTTTPATSTEAEQTTPVESDATEEADNTETPVAATTAAEAPSSSETAETSDPTSEAT 88
Query: 572 PTSEGTTKYP-EGTTVTQPTPEGTT 595
T+ + T T EG T
Sbjct: 89 DTTTSEARTVTPAATETSKPVEGQT 113
>gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger. [Transport and
binding proteins, Cations and iron carrying compounds].
Length = 1096
Score = 32.3 bits (73), Expect = 2.5
Identities = 73/370 (19%), Positives = 102/370 (27%), Gaps = 46/370 (12%)
Query: 961 TVTEPTPEGTTKYPEGTTKYPEGTTVTQATPEGTFKYPEGTTNYPEGTTVTQPTLGGTTK 1020
+ P ++ EG P+ T E T + P T PT
Sbjct: 73 MMVSSDPPKSSSEMEGEMLAPQATVGRDEATPSIAM--ENTPSPPRRTAKITPTTP-KNN 129
Query: 1021 YSEGATKYPEGTTVTEPTPEGTTKYPEGTTKYPEGTTVTQAT--------PEGTTKYPEG 1072
YS A T TP + T+ + T P T +
Sbjct: 130 YSPTAAGTERVKEDTPATPSRALNHYISTSGRQRVKSYTPKPRGEVKSSSPTQTREKVRK 189
Query: 1073 TTKYPEGTTVTEPTPEGTTKYPEGTTKYPEGTTKYTEGTTGTKPTPEGKTKYPEGTTVTQ 1132
T P G V P P P T K +E T K +K G T
Sbjct: 190 YTPSPLGRMVNSYAPSTFMTMPRSHGITPRTTVKDSEITATYKMLETNPSKRTAGKTTPT 249
Query: 1133 P-------TPEGTTKYPEGTAVTQPTPE------GTTKYSEGTTVTQP---TPEGTTKYP 1176
P TP T+ E +T P T + E + T + P
Sbjct: 250 PLKGMTDNTPTFLTREVETDLLTSPRSVVEKNTLTTPRRVESNSSTNHWGLVGKNNLTTP 309
Query: 1177 EGTTVTQPTPEGTTKYPEGTTVTQPTPEGTTKYPEGTSVTQPTPEGTTKYPELTTITQPT 1236
+GT V + TP + + +T +P T + P + + + T
Sbjct: 310 QGT-VLEHTPATSEGQVTISIMTGSSPAETKASTAAWKIRNPLSRTSAPAVRIASATFRG 368
Query: 1237 PEGTTKYPEGTSVT-----------------QPTPEG-TTKYPESTTITQPTLEGPSITH 1278
E T T +P P TT P TT P PS +
Sbjct: 369 LEKNPSTAPSTPATPRVRAVLTTQVHHCVVVKPAPAVPTTPSPSLTTALFPEAPSPSPSA 428
Query: 1279 LPTTGTTRYP 1288
LP +P
Sbjct: 429 LPPGQPDLHP 438
>gnl|CDD|234368 TIGR03835, termin_org_DnaJ, terminal organelle assembly protein
TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ
homolog and probable assembly protein of the Mycoplasma
terminal organelle. The terminal organelle is involved
in both cytadherence and gliding motility [Cellular
processes, Chemotaxis and motility].
Length = 871
Score = 32.1 bits (72), Expect = 2.8
Identities = 59/319 (18%), Positives = 91/319 (28%), Gaps = 9/319 (2%)
Query: 41 TVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEG 100
Q E P+ ++ PT E T E QP P E +P P
Sbjct: 240 LEPQDDSEDDYVIPDAEIISSPTLEVTAP-KEVEQPLQPEPVDEETVAETKAEEEPQPTQ 298
Query: 101 TIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYP-EGTTVTQPTPEGTIKYPEGT 159
T++ + E + + T QPT E P E T +P I+
Sbjct: 299 TVETKPTSAPESTVEENLPEINQPTQAVQPTSETISTTPVEPTDQLKPKEVDQIQEELKK 358
Query: 160 TVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIK-YPEGTTVTQPTPE 218
T E K + + E +K+ T + PE ++ + + +PT
Sbjct: 359 TKEIEVEELPTKKNDLVEINFDDLE-ELKFELVQTNQEKEPEKAVENWATDYQLDEPTQS 417
Query: 219 GTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGT 278
Y + E T Q +PE + P + PE + E
Sbjct: 418 NIDWYKQEDPKDLEQLVQDQATLEITEENQISPEPVEEQPSVESTA---PEDQVV--EAI 472
Query: 279 TVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEG 338
+ E QPTP +I+ TQPT I +
Sbjct: 473 KEEEELLEQKKAAEFAELFGQPTPTTSIEELLNPEQTQPTEFDEIIIENNLDNVSVADDQ 532
Query: 339 TIKYPEGTTVTQPTPEGTI 357
+ + TI
Sbjct: 533 NYQLKDDNKKFINISLPTI 551
Score = 32.1 bits (72), Expect = 2.8
Identities = 59/319 (18%), Positives = 91/319 (28%), Gaps = 9/319 (2%)
Query: 58 TVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEG 117
Q E P+ ++ PT E T E QP P E +P P
Sbjct: 240 LEPQDDSEDDYVIPDAEIISSPTLEVTAP-KEVEQPLQPEPVDEETVAETKAEEEPQPTQ 298
Query: 118 TIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYP-EGTTVTQPTPEGTIKYPEGT 176
T++ + E + + T QPT E P E T +P I+
Sbjct: 299 TVETKPTSAPESTVEENLPEINQPTQAVQPTSETISTTPVEPTDQLKPKEVDQIQEELKK 358
Query: 177 TVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIK-YPEGTTVTQPTPE 235
T E K + + E +K+ T + PE ++ + + +PT
Sbjct: 359 TKEIEVEELPTKKNDLVEINFDDLE-ELKFELVQTNQEKEPEKAVENWATDYQLDEPTQS 417
Query: 236 GTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGT 295
Y + E T Q +PE + P + PE + E
Sbjct: 418 NIDWYKQEDPKDLEQLVQDQATLEITEENQISPEPVEEQPSVESTA---PEDQVV--EAI 472
Query: 296 TVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEG 355
+ E QPTP +I+ TQPT I +
Sbjct: 473 KEEEELLEQKKAAEFAELFGQPTPTTSIEELLNPEQTQPTEFDEIIIENNLDNVSVADDQ 532
Query: 356 TIKYPEGTTVTQPTPEGTI 374
+ + TI
Sbjct: 533 NYQLKDDNKKFINISLPTI 551
Score = 32.1 bits (72), Expect = 2.8
Identities = 59/319 (18%), Positives = 91/319 (28%), Gaps = 9/319 (2%)
Query: 75 TVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEG 134
Q E P+ ++ PT E T E QP P E +P P
Sbjct: 240 LEPQDDSEDDYVIPDAEIISSPTLEVTAP-KEVEQPLQPEPVDEETVAETKAEEEPQPTQ 298
Query: 135 TIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYP-EGTTVTQPTPEGTIKYPEGT 193
T++ + E + + T QPT E P E T +P I+
Sbjct: 299 TVETKPTSAPESTVEENLPEINQPTQAVQPTSETISTTPVEPTDQLKPKEVDQIQEELKK 358
Query: 194 TVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIK-YPEGTTVTQPTPE 252
T E K + + E +K+ T + PE ++ + + +PT
Sbjct: 359 TKEIEVEELPTKKNDLVEINFDDLE-ELKFELVQTNQEKEPEKAVENWATDYQLDEPTQS 417
Query: 253 GTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGT 312
Y + E T Q +PE + P + PE + E
Sbjct: 418 NIDWYKQEDPKDLEQLVQDQATLEITEENQISPEPVEEQPSVESTA---PEDQVV--EAI 472
Query: 313 TVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEG 372
+ E QPTP +I+ TQPT I +
Sbjct: 473 KEEEELLEQKKAAEFAELFGQPTPTTSIEELLNPEQTQPTEFDEIIIENNLDNVSVADDQ 532
Query: 373 TIKYPEGTTVTQPTPEGTI 391
+ + TI
Sbjct: 533 NYQLKDDNKKFINISLPTI 551
Score = 32.1 bits (72), Expect = 2.8
Identities = 59/319 (18%), Positives = 91/319 (28%), Gaps = 9/319 (2%)
Query: 92 TVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEG 151
Q E P+ ++ PT E T E QP P E +P P
Sbjct: 240 LEPQDDSEDDYVIPDAEIISSPTLEVTAP-KEVEQPLQPEPVDEETVAETKAEEEPQPTQ 298
Query: 152 TIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYP-EGTTVTQPTPEGTIKYPEGT 210
T++ + E + + T QPT E P E T +P I+
Sbjct: 299 TVETKPTSAPESTVEENLPEINQPTQAVQPTSETISTTPVEPTDQLKPKEVDQIQEELKK 358
Query: 211 TVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIK-YPEGTTVTQPTPE 269
T E K + + E +K+ T + PE ++ + + +PT
Sbjct: 359 TKEIEVEELPTKKNDLVEINFDDLE-ELKFELVQTNQEKEPEKAVENWATDYQLDEPTQS 417
Query: 270 GTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGT 329
Y + E T Q +PE + P + PE + E
Sbjct: 418 NIDWYKQEDPKDLEQLVQDQATLEITEENQISPEPVEEQPSVESTA---PEDQVV--EAI 472
Query: 330 TVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEG 389
+ E QPTP +I+ TQPT I +
Sbjct: 473 KEEEELLEQKKAAEFAELFGQPTPTTSIEELLNPEQTQPTEFDEIIIENNLDNVSVADDQ 532
Query: 390 TIKYPEGTTVTQPTPEGTI 408
+ + TI
Sbjct: 533 NYQLKDDNKKFINISLPTI 551
Score = 32.1 bits (72), Expect = 2.8
Identities = 59/319 (18%), Positives = 91/319 (28%), Gaps = 9/319 (2%)
Query: 109 TVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEG 168
Q E P+ ++ PT E T E QP P E +P P
Sbjct: 240 LEPQDDSEDDYVIPDAEIISSPTLEVTAP-KEVEQPLQPEPVDEETVAETKAEEEPQPTQ 298
Query: 169 TIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYP-EGTTVTQPTPEGTIKYPEGT 227
T++ + E + + T QPT E P E T +P I+
Sbjct: 299 TVETKPTSAPESTVEENLPEINQPTQAVQPTSETISTTPVEPTDQLKPKEVDQIQEELKK 358
Query: 228 TVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIK-YPEGTTVTQPTPE 286
T E K + + E +K+ T + PE ++ + + +PT
Sbjct: 359 TKEIEVEELPTKKNDLVEINFDDLE-ELKFELVQTNQEKEPEKAVENWATDYQLDEPTQS 417
Query: 287 GTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGT 346
Y + E T Q +PE + P + PE + E
Sbjct: 418 NIDWYKQEDPKDLEQLVQDQATLEITEENQISPEPVEEQPSVESTA---PEDQVV--EAI 472
Query: 347 TVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEG 406
+ E QPTP +I+ TQPT I +
Sbjct: 473 KEEEELLEQKKAAEFAELFGQPTPTTSIEELLNPEQTQPTEFDEIIIENNLDNVSVADDQ 532
Query: 407 TIKYPEGTTVTQPTPEGTI 425
+ + TI
Sbjct: 533 NYQLKDDNKKFINISLPTI 551
Score = 32.1 bits (72), Expect = 2.8
Identities = 59/319 (18%), Positives = 91/319 (28%), Gaps = 9/319 (2%)
Query: 126 TVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEG 185
Q E P+ ++ PT E T E QP P E +P P
Sbjct: 240 LEPQDDSEDDYVIPDAEIISSPTLEVTAP-KEVEQPLQPEPVDEETVAETKAEEEPQPTQ 298
Query: 186 TIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYP-EGTTVTQPTPEGTIKYPEGT 244
T++ + E + + T QPT E P E T +P I+
Sbjct: 299 TVETKPTSAPESTVEENLPEINQPTQAVQPTSETISTTPVEPTDQLKPKEVDQIQEELKK 358
Query: 245 TVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIK-YPEGTTVTQPTPE 303
T E K + + E +K+ T + PE ++ + + +PT
Sbjct: 359 TKEIEVEELPTKKNDLVEINFDDLE-ELKFELVQTNQEKEPEKAVENWATDYQLDEPTQS 417
Query: 304 GTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGT 363
Y + E T Q +PE + P + PE + E
Sbjct: 418 NIDWYKQEDPKDLEQLVQDQATLEITEENQISPEPVEEQPSVESTA---PEDQVV--EAI 472
Query: 364 TVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEG 423
+ E QPTP +I+ TQPT I +
Sbjct: 473 KEEEELLEQKKAAEFAELFGQPTPTTSIEELLNPEQTQPTEFDEIIIENNLDNVSVADDQ 532
Query: 424 TIKYPEGTTVTQPTPEGTI 442
+ + TI
Sbjct: 533 NYQLKDDNKKFINISLPTI 551
Score = 32.1 bits (72), Expect = 2.8
Identities = 59/319 (18%), Positives = 91/319 (28%), Gaps = 9/319 (2%)
Query: 143 TVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEG 202
Q E P+ ++ PT E T E QP P E +P P
Sbjct: 240 LEPQDDSEDDYVIPDAEIISSPTLEVTAP-KEVEQPLQPEPVDEETVAETKAEEEPQPTQ 298
Query: 203 TIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYP-EGTTVTQPTPEGTIKYPEGT 261
T++ + E + + T QPT E P E T +P I+
Sbjct: 299 TVETKPTSAPESTVEENLPEINQPTQAVQPTSETISTTPVEPTDQLKPKEVDQIQEELKK 358
Query: 262 TVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIK-YPEGTTVTQPTPE 320
T E K + + E +K+ T + PE ++ + + +PT
Sbjct: 359 TKEIEVEELPTKKNDLVEINFDDLE-ELKFELVQTNQEKEPEKAVENWATDYQLDEPTQS 417
Query: 321 GTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGT 380
Y + E T Q +PE + P + PE + E
Sbjct: 418 NIDWYKQEDPKDLEQLVQDQATLEITEENQISPEPVEEQPSVESTA---PEDQVV--EAI 472
Query: 381 TVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEG 440
+ E QPTP +I+ TQPT I +
Sbjct: 473 KEEEELLEQKKAAEFAELFGQPTPTTSIEELLNPEQTQPTEFDEIIIENNLDNVSVADDQ 532
Query: 441 TIKYPEGTTVTQPTPEGTI 459
+ + TI
Sbjct: 533 NYQLKDDNKKFINISLPTI 551
Score = 31.7 bits (71), Expect = 3.0
Identities = 59/316 (18%), Positives = 91/316 (28%), Gaps = 9/316 (2%)
Query: 10 QPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIK 69
Q E P+ ++ PT E T E QP P E +P P T++
Sbjct: 243 QDDSEDDYVIPDAEIISSPTLEVTAP-KEVEQPLQPEPVDEETVAETKAEEEPQPTQTVE 301
Query: 70 YPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYP-EGTTVTQPTPEGTIKYPEGTTVT 128
+ E + + T QPT E P E T +P I+ T
Sbjct: 302 TKPTSAPESTVEENLPEINQPTQAVQPTSETISTTPVEPTDQLKPKEVDQIQEELKKTKE 361
Query: 129 QPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIK-YPEGTTVTQPTPEGTI 187
E K + + E +K+ T + PE ++ + + +PT
Sbjct: 362 IEVEELPTKKNDLVEINFDDLE-ELKFELVQTNQEKEPEKAVENWATDYQLDEPTQSNID 420
Query: 188 KYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVT 247
Y + E T Q +PE + P + PE + E
Sbjct: 421 WYKQEDPKDLEQLVQDQATLEITEENQISPEPVEEQPSVESTA---PEDQVV--EAIKEE 475
Query: 248 QPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTIK 307
+ E QPTP +I+ TQPT I + +
Sbjct: 476 EELLEQKKAAEFAELFGQPTPTTSIEELLNPEQTQPTEFDEIIIENNLDNVSVADDQNYQ 535
Query: 308 YPEGTTVTQPTPEGTI 323
+ TI
Sbjct: 536 LKDDNKKFINISLPTI 551
Score = 31.7 bits (71), Expect = 3.6
Identities = 67/374 (17%), Positives = 100/374 (26%), Gaps = 18/374 (4%)
Query: 449 TVTQPTPEGTIKYPEGTTVTQPTPEGTIKYPEGTTVTQPTPEGTTTYPERTTVTQPTPES 508
Q E P+ ++ PT E T E QP P T E +P P
Sbjct: 240 LEPQDDSEDDYVIPDAEIISSPTLEVTAP-KEVEQPLQPEPVDEETVAETKAEEEPQPTQ 298
Query: 509 TTKYPEGTTVTQPTPEGTTKYPEGTTVTQPTSEGTTKYP-EGTTVTQPTPEGTTKYPEGT 567
T + + E + + T QPTSE + P E T +P +
Sbjct: 299 TVETKPTSAPESTVEENLPEINQPTQAVQPTSETISTTPVEPTDQLKPKEVDQIQEELKK 358
Query: 568 TVTQPTSEGTTKYPEGTTVTQPTPEGTTKYPEGTT--KYPEGTTVTQPTSEGTTKYPEGT 625
T E TK + + E T K PE T
Sbjct: 359 TKEIEVEELPTKKNDLVEINFDDLEELKFELVQTNQEKEPEKAVENWATD---------Y 409
Query: 626 TVTQPTPEGTTKYPEGTTKYPEGTTVTQPTPEGTTKYSEGTTEYPEGTTVTRPTPEGTTK 685
+ +PT Y + K E Q T E T + E +V PE
Sbjct: 410 QLDEPTQSNIDWYKQEDPKDLEQLVQDQATLEITEENQISPEPVEEQPSVESTAPEDQVV 469
Query: 686 YSEGTTEYPEGTTKYPEGATV-TQPTPEGTTKYPEGTTVTQPT---PEGTLKYPEGTTKY 741
+ E K E A + QPTP + + TQPT + +
Sbjct: 470 EAIKEEEELLEQKKAAEFAELFGQPTPTTSIEELLNPEQTQPTEFDEIIIENNLDNVSVA 529
Query: 742 PEGTTKYPEGTTATQPTPEGTTKYPRGTTVTQPTPQVTTKYPEGTTQTQTTPEGTIKYPE 801
+ + + T + + T T E ++
Sbjct: 530 DDQNYQLKDDNKKFINISL-PTIVSSNESDDLIYDPLQQPVRPMHTSDSETYEFSVDLLR 588
Query: 802 ETTKYPEGTTVTQP 815
+ T +
Sbjct: 589 KQAGPNLAKTDAKM 602
>gnl|CDD|185628 PTZ00449, PTZ00449, 104 kDa microneme/rhoptry antigen; Provisional.
Length = 943
Score = 32.0 bits (72), Expect = 3.0
Identities = 59/313 (18%), Positives = 92/313 (29%), Gaps = 19/313 (6%)
Query: 513 PEGTTVTQPTPEGTTKYPEGTTVTQPTSEGTTKYPEGTTVTQPTPEGTTKYPEGTTVTQP 572
PEG + P+ EG S+ + + EG + K P +P
Sbjct: 511 PEGPEASGLPPKAP-GDKEGEEGEHEDSKESDEPKEGGKPGETKEGEVGKKPGPAKEHKP 569
Query: 573 TSEGT-TKYPEGTTVTQPTPEGTTKYPEGTTKYPEGTTVTQPTSEGTTKYPEGTTVTQPT 631
+ T +K PE P K PE K + +PT + K PE + +
Sbjct: 570 SKIPTLSKKPEF-----PKDPKHPKDPEEPKKPKRPRSAQRPTRPKSPKLPELLDIPK-- 622
Query: 632 PEGTTKYPEGTTKYPEGTTVTQPTPEGTTKYSEGTTEYPEGTTVTRPTPEGTTKYSEGTT 691
+ K PE +P+ + + EG P P K+ E
Sbjct: 623 ---SPKRPESPKSPKRPPPPQRPS---SPERPEGPKIIKSPKPPKSPKPPFDPKFKEKFY 676
Query: 692 E-YPEGTTKYPEGATVTQPTPEGTTKYPEGTTVTQPTPEGTLKY-PEGTTKYPEGTTKYP 749
+ Y + K E T + E T TP T + P + E +
Sbjct: 677 DDYLDAAAKSKETKTTVVLDESFESILKETLPETPGTPFTTPRPLPPKLPRDEEFPFEPI 736
Query: 750 EGTTATQPTPEGTTKYPRGTTVTQPTPQVTTKYPEGTTQTQTTPEGT--IKYPEETTKYP 807
A QP P T P+ + + P+E K P
Sbjct: 737 GDPDAEQPDDIEFFTPPEEERTFFHETPADTPLPDILAEEFKEEDIHAETGEPDEAMKRP 796
Query: 808 EGTTVTQPTPEGT 820
+ + + P G
Sbjct: 797 DSPSEHEDKPPGD 809
>gnl|CDD|235778 PRK06319, PRK06319, DNA topoisomerase I/SWI domain fusion protein;
Validated.
Length = 860
Score = 30.9 bits (70), Expect = 5.5
Identities = 17/80 (21%), Positives = 26/80 (32%), Gaps = 6/80 (7%)
Query: 1074 TKYPEGTTVTEPTPEGTTKYPEGTTKYPEGTTKYTEGTTGTKPTPEGKTKYPEGTTVTQP 1133
++YP + + TKY GT K P Y + T K + K K +
Sbjct: 720 SEYPACSVIGNSIDAVITKYA-GTPKTP-----YEKKTKAKKKSASTKGKAAKTVKKKSK 773
Query: 1134 TPEGTTKYPEGTAVTQPTPE 1153
T + P+P
Sbjct: 774 AKSKKTTKKRAGPLYTPSPA 793
>gnl|CDD|172358 PRK13831, PRK13831, conjugal transfer protein TrbI; Provisional.
Length = 432
Score = 30.5 bits (69), Expect = 7.0
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 496 PERTTVTQPTPESTTKYPEGTTVTQPTPE 524
P++ QPTP T + + P P
Sbjct: 85 PQQQQTFQPTPVETQQEEKAVNPFTPQPG 113
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.299 0.124 0.362
Gapped
Lambda K H
0.267 0.0732 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 67,867,975
Number of extensions: 6710195
Number of successful extensions: 8381
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6007
Number of HSP's successfully gapped: 1006
Length of query: 1346
Length of database: 10,937,602
Length adjustment: 109
Effective length of query: 1237
Effective length of database: 6,103,016
Effective search space: 7549430792
Effective search space used: 7549430792
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 17 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.6 bits)
S2: 65 (28.8 bits)