Query psy9424
Match_columns 535
No_of_seqs 287 out of 2382
Neff 8.6
Searched_HMMs 29240
Date Fri Aug 16 19:00:22 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9424.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9424hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1z1y_A Ookinete surface protei 99.8 4E-20 1.4E-24 171.5 1.8 151 245-486 10-174 (186)
2 2vj3_A Neurogenic locus notch 99.7 4.9E-18 1.7E-22 148.9 10.6 121 142-327 4-127 (135)
3 1z1y_A Ookinete surface protei 99.7 2.3E-19 7.8E-24 166.4 1.9 154 147-402 9-173 (186)
4 4fbr_A Lectin, myxobacterial h 99.7 4.9E-22 1.7E-26 190.0 -20.1 244 14-400 14-265 (267)
5 4fbr_A Lectin, myxobacterial h 99.7 3.4E-21 1.1E-25 184.3 -16.8 213 149-483 38-265 (267)
6 4d90_A EGF-like repeat and dis 99.7 1.5E-16 5E-21 140.9 10.7 123 144-316 1-133 (143)
7 2vj3_A Neurogenic locus notch 99.7 1.5E-16 5.1E-21 139.3 9.3 102 373-486 12-118 (135)
8 2vj2_A Jagged-1; signalling, p 99.6 1.3E-16 4.5E-21 145.2 4.2 61 248-315 105-168 (169)
9 2bou_A EGF-like module contain 99.6 9.8E-16 3.4E-20 135.6 6.6 125 149-324 7-142 (143)
10 4d90_A EGF-like repeat and dis 99.6 6.7E-15 2.3E-19 130.1 10.6 122 33-274 1-131 (143)
11 2ygq_A WIF-1, WNT inhibitory f 99.6 2.6E-15 8.9E-20 150.6 7.1 160 33-316 149-308 (324)
12 2ygq_A WIF-1, WNT inhibitory f 99.6 5.1E-15 1.7E-19 148.5 8.5 154 245-486 152-307 (324)
13 2vj2_A Jagged-1; signalling, p 99.5 1.9E-15 6.6E-20 137.4 4.7 150 259-486 15-168 (169)
14 1yo8_A Thrombospondin-2; EGF, 99.5 2E-14 7E-19 154.3 11.1 132 142-331 2-161 (634)
15 2bou_A EGF-like module contain 99.5 1E-14 3.5E-19 128.9 7.1 118 245-402 6-132 (143)
16 1uzk_A Fibrillin-1; glycoprote 99.5 1.5E-15 5E-20 137.4 1.4 60 258-318 97-161 (162)
17 1yo8_A Thrombospondin-2; EGF, 99.5 8.2E-14 2.8E-18 149.6 11.7 122 245-401 8-141 (634)
18 1uzk_A Fibrillin-1; glycoprote 99.5 1.4E-15 5E-20 137.4 -2.1 143 142-401 2-156 (162)
19 3fcs_B Integrin beta-3; beta p 99.5 1.3E-13 4.4E-18 150.3 12.1 180 145-448 436-629 (690)
20 3fcs_B Integrin beta-3; beta p 99.4 6.4E-13 2.2E-17 144.8 10.6 165 245-490 439-631 (690)
21 1dx5_I Thrombomodulin; serine 99.4 4.3E-14 1.5E-18 120.5 1.0 109 142-314 3-113 (118)
22 2w86_A Fibrillin-1, fibrillin1 99.3 5E-14 1.7E-18 125.1 -2.0 127 142-318 3-146 (147)
23 2w86_A Fibrillin-1, fibrillin1 99.2 5E-13 1.7E-17 118.6 -3.5 42 278-320 2-43 (147)
24 2gy5_A Angiopoietin-1 receptor 99.2 3E-11 1E-15 125.3 8.1 163 14-315 186-349 (423)
25 1dx5_I Thrombomodulin; serine 99.2 7.3E-12 2.5E-16 106.6 2.6 96 374-484 10-112 (118)
26 1emn_A Fibrillin; extracellula 99.1 6.6E-11 2.3E-15 93.6 6.5 64 246-314 12-78 (82)
27 1tpg_A T-plasminogen activator 99.1 9.8E-11 3.3E-15 94.6 5.4 57 254-315 25-85 (91)
28 1lmj_A Fibrillin 1; EGF, calci 99.0 1.3E-10 4.3E-15 92.9 4.6 72 245-318 10-85 (86)
29 2gy5_A Angiopoietin-1 receptor 99.0 8.4E-10 2.9E-14 114.4 11.9 137 260-487 184-320 (423)
30 1tpg_A T-plasminogen activator 99.0 1.7E-10 5.9E-15 93.1 4.1 80 388-486 1-85 (91)
31 3k6s_B Integrin beta-2; cell r 99.0 2.8E-10 9.4E-15 123.7 6.2 161 38-295 434-607 (687)
32 1emn_A Fibrillin; extracellula 99.0 4.4E-10 1.5E-14 88.8 5.0 73 142-273 4-77 (82)
33 1x7a_L Coagulation factor IX, 98.9 5.2E-10 1.8E-14 98.7 5.2 83 220-323 44-129 (146)
34 3k6s_B Integrin beta-2; cell r 98.9 9.6E-10 3.3E-14 119.5 7.7 158 245-486 434-622 (687)
35 1z6c_A Vitamin K-dependent pro 98.9 6.6E-10 2.3E-14 88.9 4.8 64 246-312 11-77 (87)
36 1aut_L Activated protein C; se 98.9 8.7E-10 3E-14 93.0 5.6 86 246-338 20-108 (114)
37 4aqs_A Laminin subunit beta-1; 98.9 9.4E-10 3.2E-14 117.9 7.2 63 389-486 460-524 (525)
38 1x7a_L Coagulation factor IX, 98.9 8E-10 2.7E-14 97.5 4.9 83 140-282 45-129 (146)
39 1lmj_A Fibrillin 1; EGF, calci 98.9 5.5E-10 1.9E-14 89.2 3.5 68 374-484 11-80 (86)
40 1z6c_A Vitamin K-dependent pro 98.9 6.2E-10 2.1E-14 89.1 3.3 66 375-486 12-77 (87)
41 1aut_L Activated protein C; se 98.8 2.6E-09 8.7E-14 90.1 4.8 96 142-297 5-109 (114)
42 2c4f_L Coagulation factor VII 98.8 2.4E-09 8.1E-14 94.1 4.5 76 245-323 52-132 (142)
43 1nfu_B Coagulation factor XA, 98.8 1.4E-09 4.7E-14 100.1 2.2 92 135-291 34-130 (195)
44 2c4f_L Coagulation factor VII 98.8 1.7E-09 5.9E-14 94.9 2.1 37 142-178 46-82 (142)
45 2w2n_E LDL receptor, low-densi 98.7 2.6E-09 9E-14 88.8 2.0 68 246-317 37-105 (107)
46 2vh0_B Activated factor XA lig 98.7 2.3E-09 7.7E-14 93.2 1.3 84 136-281 35-123 (134)
47 4aqs_A Laminin subunit beta-1; 98.7 5.9E-09 2E-13 111.7 4.2 56 260-315 459-524 (525)
48 2vh0_B Activated factor XA lig 98.7 3E-09 1E-13 92.4 1.1 72 245-321 47-122 (134)
49 1nfu_B Coagulation factor XA, 98.6 5.3E-09 1.8E-13 96.2 1.1 81 220-321 38-122 (195)
50 3h5c_B Vitamin K-dependent pro 98.6 3.8E-08 1.3E-12 98.5 7.3 76 245-325 10-89 (317)
51 2w2n_E LDL receptor, low-densi 98.6 1E-08 3.4E-13 85.3 1.5 80 133-272 19-100 (107)
52 3h5c_B Vitamin K-dependent pro 98.5 1.8E-07 6.1E-12 93.6 8.0 84 142-283 4-88 (317)
53 1n7d_A LDL receptor, low-densi 98.5 2.4E-06 8.1E-11 94.7 16.6 72 246-321 302-374 (699)
54 1n7d_A LDL receptor, low-densi 98.4 2.9E-06 1E-10 94.0 15.8 79 142-280 293-374 (699)
55 3u7u_G Neuregulin 1; signaling 98.4 1.3E-07 4.4E-12 67.8 2.7 42 443-486 2-48 (55)
56 3m0c_C LDL receptor, low-densi 98.3 8.4E-07 2.9E-11 99.2 8.1 70 253-324 325-395 (791)
57 1edm_B Factor IX; epidermal gr 98.3 5.5E-07 1.9E-11 60.0 3.9 36 451-486 3-38 (39)
58 1klo_A Laminin; glycoprotein; 98.2 7.2E-07 2.5E-11 79.9 3.6 29 40-68 2-33 (162)
59 3u7u_G Neuregulin 1; signaling 98.2 8.1E-07 2.8E-11 63.6 2.8 43 23-68 1-48 (55)
60 3p5b_L Low density lipoprotein 98.2 2E-06 6.8E-11 88.8 6.9 72 248-321 8-80 (400)
61 2p28_B Integrin beta-2; hybrid 98.2 9.8E-07 3.4E-11 82.6 3.9 107 149-315 96-213 (217)
62 1edm_B Factor IX; epidermal gr 98.1 1.5E-06 5.2E-11 57.7 3.6 37 142-178 2-38 (39)
63 3m0c_C LDL receptor, low-densi 98.0 9.4E-06 3.2E-10 90.8 9.3 71 155-283 324-395 (791)
64 2p28_B Integrin beta-2; hybrid 98.0 2.3E-06 7.8E-11 80.1 2.9 97 373-486 95-213 (217)
65 3p5b_L Low density lipoprotein 98.0 3.8E-06 1.3E-10 86.8 4.2 78 144-279 1-79 (400)
66 1egf_A Epidermal growth factor 97.9 9E-06 3.1E-10 58.0 4.1 36 451-486 3-43 (53)
67 1klo_A Laminin; glycoprotein; 97.8 1.4E-05 4.9E-10 71.4 5.2 29 150-178 2-33 (162)
68 3v65_B Low-density lipoprotein 97.8 4.2E-06 1.4E-10 86.0 1.4 69 246-321 11-84 (386)
69 2k2s_B Micronemal protein 6; m 97.8 3.2E-06 1.1E-10 61.9 -0.0 36 451-486 11-49 (61)
70 1a3p_A Epidermal growth factor 97.8 1.7E-05 5.7E-10 54.5 3.4 34 453-486 2-40 (45)
71 3v65_B Low-density lipoprotein 97.7 6.3E-06 2.2E-10 84.6 1.6 83 142-281 2-85 (386)
72 1egf_A Epidermal growth factor 97.7 2.7E-05 9.1E-10 55.5 3.9 38 142-179 2-44 (53)
73 1k36_A Epiregulin; EGF-like fo 97.6 2.5E-05 8.5E-10 53.7 2.4 35 451-486 3-42 (46)
74 2wg3_C Hedgehog-interacting pr 97.6 9.3E-06 3.2E-10 85.2 -0.2 41 15-65 379-419 (463)
75 1a3p_A Epidermal growth factor 97.5 6.7E-05 2.3E-09 51.4 3.3 34 145-178 2-40 (45)
76 2k2s_B Micronemal protein 6; m 97.5 2E-05 6.8E-10 57.6 0.6 40 276-315 7-49 (61)
77 1hae_A Heregulin-alpha; growth 97.4 3.3E-05 1.1E-09 57.2 1.0 36 451-486 6-46 (63)
78 1k36_A Epiregulin; EGF-like fo 97.3 6.6E-05 2.2E-09 51.6 1.7 36 143-179 3-43 (46)
79 3zyj_B Netrin-G1; cell adhesio 97.3 0.00014 4.9E-09 74.1 4.5 88 380-486 304-397 (426)
80 3ca7_A Protein spitz; argos, E 97.2 3.8E-05 1.3E-09 54.4 -0.7 41 13-68 3-47 (52)
81 2wg3_C Hedgehog-interacting pr 97.1 7.4E-05 2.5E-09 78.3 0.0 43 130-177 379-421 (463)
82 1hae_A Heregulin-alpha; growth 97.1 0.00012 4E-09 54.2 0.9 36 144-179 7-47 (63)
83 1nql_B Epidermal growth factor 97.0 0.0002 6.7E-09 50.8 1.1 31 456-486 11-43 (53)
84 1nql_B Epidermal growth factor 96.9 0.00026 9E-09 50.2 1.3 31 38-68 11-43 (53)
85 2jkh_L Factor X light chain; p 96.8 0.00039 1.3E-08 49.8 1.7 45 33-90 2-47 (55)
86 3zyj_B Netrin-G1; cell adhesio 96.7 0.00055 1.9E-08 69.8 2.8 29 151-179 299-328 (426)
87 3ca7_A Protein spitz; argos, E 96.6 0.00068 2.3E-08 47.8 1.6 31 456-486 13-47 (52)
88 1apq_A Complement protease C1R 96.6 0.0015 5E-08 46.1 3.2 33 31-65 3-44 (53)
89 1apq_A Complement protease C1R 96.5 0.0013 4.6E-08 46.4 2.9 39 278-318 2-50 (53)
90 2kl7_A Fibulin-4; secreted, ca 96.5 0.0018 6.1E-08 48.9 3.6 30 373-402 10-40 (71)
91 2jkh_L Factor X light chain; p 96.5 0.001 3.5E-08 47.5 1.8 43 281-325 2-46 (55)
92 2kl7_A Fibulin-4; secreted, ca 96.2 0.0021 7.3E-08 48.5 2.6 35 31-65 2-38 (71)
93 1kli_L Factor VIIA; extrinsic 96.1 0.0022 7.5E-08 48.1 1.9 46 278-325 3-51 (69)
94 1ob1_C Major merozoite surface 96.1 0.0055 1.9E-07 48.6 4.2 64 246-310 10-83 (99)
95 3ltf_D Protein spitz; receptor 95.9 0.002 6.9E-08 46.5 1.1 29 458-486 15-47 (58)
96 1kli_L Factor VIIA; extrinsic 95.9 0.003 1E-07 47.4 2.0 45 32-89 5-51 (69)
97 1g1s_A P-selectin; selectin, l 95.8 0.0017 5.9E-08 57.5 0.6 36 451-486 119-154 (162)
98 1n1i_A Merozoite surface prote 95.8 0.016 5.6E-07 46.2 5.8 64 246-310 16-84 (105)
99 1ob1_C Major merozoite surface 95.7 0.005 1.7E-07 48.9 2.7 71 146-270 7-83 (99)
100 1gl4_A Nidogen-1, entactin; im 95.5 0.0015 5.3E-08 62.7 -1.3 36 31-66 4-40 (285)
101 1kig_L Factor XA; glycoprotein 95.4 0.0056 1.9E-07 42.9 1.6 32 293-324 11-42 (51)
102 2fd6_A Urokinase-type plasmino 95.4 0.017 6E-07 48.5 5.0 56 150-207 2-60 (122)
103 1n1i_A Merozoite surface prote 95.3 0.014 4.9E-07 46.6 4.0 70 145-270 12-84 (105)
104 1gl4_A Nidogen-1, entactin; im 95.2 0.0035 1.2E-07 60.2 0.3 40 451-493 5-46 (285)
105 1kig_L Factor XA; glycoprotein 95.2 0.0057 2E-07 42.8 1.1 38 38-88 5-42 (51)
106 3ltf_D Protein spitz; receptor 95.1 0.0058 2E-07 44.0 1.1 29 40-68 15-47 (58)
107 1q4g_A Prostaglandin G/H synth 94.8 0.0097 3.3E-07 63.4 2.2 36 451-486 2-39 (553)
108 3nt1_A Prostaglandin-endoperox 94.7 0.014 4.9E-07 62.2 3.1 36 451-486 1-38 (587)
109 1g1s_A P-selectin; selectin, l 94.6 0.0093 3.2E-07 52.6 1.4 38 245-285 124-161 (162)
110 2bz6_L Blood coagulation facto 94.5 0.013 4.4E-07 41.3 1.5 33 293-325 12-45 (53)
111 2fd6_A Urokinase-type plasmino 94.3 0.042 1.4E-06 46.1 4.5 57 247-315 2-62 (122)
112 1q4g_A Prostaglandin G/H synth 93.8 0.02 6.9E-07 60.9 2.1 37 143-179 2-40 (553)
113 2bz6_L Blood coagulation facto 93.8 0.021 7.2E-07 40.2 1.5 38 39-89 7-45 (53)
114 3cfw_A L-selectin; EGF, cell a 93.7 0.024 8.1E-07 50.1 1.9 36 451-486 119-154 (164)
115 3e50_C Protransforming growth 93.2 0.072 2.5E-06 36.8 3.4 35 33-68 6-44 (50)
116 3nt1_A Prostaglandin-endoperox 93.2 0.035 1.2E-06 59.3 2.6 37 143-179 1-39 (587)
117 1iox_A Betacellulin; EGF-like 93.2 0.037 1.3E-06 38.4 1.8 36 32-68 5-44 (50)
118 3e50_C Protransforming growth 93.1 0.083 2.8E-06 36.5 3.5 30 456-486 13-44 (50)
119 2rnl_A Amphiregulin; AR, color 92.9 0.083 2.8E-06 36.5 3.3 36 32-68 9-48 (50)
120 2e26_A Reelin, reeler protein; 92.7 0.02 7E-07 61.7 -0.0 54 5-68 511-564 (725)
121 1iox_A Betacellulin; EGF-like 92.0 0.059 2E-06 37.3 1.6 30 456-486 13-44 (50)
122 2rnl_A Amphiregulin; AR, color 92.0 0.11 3.7E-06 35.9 2.9 30 456-486 17-48 (50)
123 1xdt_R Hbegf, heparin-binding 91.9 0.074 2.5E-06 40.5 2.2 36 32-68 37-76 (79)
124 3cfw_A L-selectin; EGF, cell a 91.7 0.079 2.7E-06 46.6 2.6 33 33-66 120-152 (164)
125 1szb_A Mannose binding lectin- 91.5 0.052 1.8E-06 48.2 1.2 50 267-320 113-167 (170)
126 1g1t_A E-selectin; EGF, adhesi 91.3 0.039 1.4E-06 48.2 0.2 36 451-486 119-154 (157)
127 1xdt_R Hbegf, heparin-binding 91.1 0.078 2.7E-06 40.3 1.6 35 451-486 37-76 (79)
128 2ygo_A WIF-1, WNT inhibitory f 91.1 0.17 5.7E-06 45.3 3.9 28 456-486 152-179 (188)
129 1szb_A Mannose binding lectin- 90.6 0.058 2E-06 48.0 0.5 43 19-65 113-159 (170)
130 1g1t_A E-selectin; EGF, adhesi 90.5 0.044 1.5E-06 47.8 -0.3 37 143-179 119-155 (157)
131 2wph_E Coagulation factor IXA 90.3 0.24 8.2E-06 35.5 3.6 30 293-322 12-42 (59)
132 2ygo_A WIF-1, WNT inhibitory f 90.2 0.16 5.6E-06 45.3 3.1 38 22-68 142-179 (188)
133 2i9a_A Urokinase-type plasmino 88.9 0.38 1.3E-05 41.5 4.4 38 150-187 14-54 (145)
134 3asi_A Neurexin-1-alpha; beta- 87.3 0.4 1.4E-05 49.0 4.2 36 451-486 185-221 (410)
135 2y38_A Laminin subunit alpha-5 86.8 1.3 4.4E-05 44.8 7.4 28 41-68 268-300 (403)
136 2wph_E Coagulation factor IXA 85.6 0.53 1.8E-05 33.7 2.8 30 463-493 11-41 (59)
137 4aqt_A Laminin subunit gamma-1 84.8 0.87 3E-05 45.7 5.0 29 151-179 257-287 (375)
138 2i9a_A Urokinase-type plasmino 84.2 0.64 2.2E-05 40.0 3.3 31 457-487 13-46 (145)
139 3asi_A Neurexin-1-alpha; beta- 82.9 0.63 2.2E-05 47.4 3.2 36 143-178 185-221 (410)
140 4aqt_A Laminin subunit gamma-1 78.6 2.1 7.3E-05 42.9 5.2 23 385-407 268-290 (375)
141 1nzi_A Complement C1S componen 76.7 0.98 3.4E-05 39.2 1.9 49 267-319 106-157 (159)
142 3qcw_A Neurexin-1-alpha; synap 76.2 1.6 5.5E-05 51.2 4.1 36 451-486 1017-1053(1245)
143 1oig_A Dumpy, CG33196-PB; stru 76.2 1.4 4.8E-05 25.6 1.8 24 497-521 3-26 (26)
144 3v64_C Agrin; beta propeller, 73.5 1.1 3.6E-05 44.6 1.4 32 32-65 1-32 (349)
145 1nzi_A Complement C1S componen 73.2 1.3 4.3E-05 38.5 1.6 43 19-65 106-150 (159)
146 3qcw_A Neurexin-1-alpha; synap 71.6 1.8 6.1E-05 50.8 2.9 36 451-486 619-655 (1245)
147 3f1s_B Vitamin K-dependent pro 69.9 2.5 8.7E-05 40.4 3.2 43 280-324 2-47 (283)
148 2p26_A Integrin beta-2; hybrid 66.2 1.9 6.6E-05 41.3 1.4 50 12-65 206-265 (280)
149 2y38_A Laminin subunit alpha-5 66.2 14 0.00048 37.2 7.8 17 389-405 286-302 (403)
150 3v64_C Agrin; beta propeller, 65.5 2.5 8.5E-05 41.8 2.1 28 293-320 13-40 (349)
151 3f1s_B Vitamin K-dependent pro 65.2 2.8 9.5E-05 40.2 2.3 32 32-65 2-35 (283)
152 2e26_A Reelin, reeler protein; 57.7 2.6 8.7E-05 45.6 0.6 44 264-315 521-564 (725)
153 2p26_A Integrin beta-2; hybrid 55.7 4 0.00014 39.1 1.5 55 248-311 198-264 (280)
154 1b9w_A Protein (merozoite surf 51.5 22 0.00076 27.5 4.7 64 246-310 10-79 (95)
155 3fby_A COMP, cartilage oligome 51.5 6.6 0.00023 40.9 2.4 30 456-485 26-56 (551)
156 1b9w_A Protein (merozoite surf 49.3 13 0.00045 28.8 3.2 32 145-176 6-38 (95)
157 3fby_A COMP, cartilage oligome 40.4 12 0.0004 39.0 2.2 28 149-176 27-55 (551)
158 2ddu_A Reelin; beta-jelly-roll 39.0 6.1 0.00021 39.4 -0.1 52 5-65 167-218 (387)
159 3sov_A LRP-6, low-density lipo 33.3 28 0.00096 33.6 3.7 32 32-65 267-301 (318)
160 3fl7_A Ephrin receptor; ATP-bi 27.7 25 0.00087 36.9 2.3 58 2-65 252-321 (536)
161 3sov_A LRP-6, low-density lipo 26.7 48 0.0016 31.9 4.0 28 293-320 280-309 (318)
162 3fl7_A Ephrin receptor; ATP-bi 26.5 17 0.00057 38.3 0.6 18 467-484 305-322 (536)
163 3t5o_A Complement component C6 24.5 38 0.0013 38.1 3.1 39 452-490 498-536 (913)
164 4a0p_A LRP6, LRP-6, low-densit 22.4 37 0.0013 36.4 2.4 32 32-65 265-298 (628)
165 1ijq_A LDL receptor, low-densi 20.8 61 0.0021 30.9 3.4 26 293-318 283-314 (316)
166 4a0p_A LRP6, LRP-6, low-densit 20.8 46 0.0016 35.6 2.7 39 280-320 265-306 (628)
No 1
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.77 E-value=4e-20 Score=171.54 Aligned_cols=151 Identities=21% Similarity=0.466 Sum_probs=118.8
Q ss_pred CCCCCCCCccccCCCCeeeeCCCCCccCCCCCCeeCCcCC----CCCCCCCCeeecCC-----CCeeeeCCCCCccCCCC
Q psy9424 245 NNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCA----AKPCGPGARCDNSR-----GSYKCLCPLGLVGDPYG 315 (535)
Q Consensus 245 ~~~C~~~~~C~~~~g~~~C~C~~G~~G~~~~~C~~~~~C~----~~~C~~~~~C~~~~-----g~~~C~C~~Gy~g~~c~ 315 (535)
+.+|.+ ++|+++.++|+|.|++||+|.....|+++++|. ..+|.++++|++.. ++|+|+|++||+|..+.
T Consensus 10 ~~pC~n-g~C~~~~g~~~C~C~~G~~g~~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~~ 88 (186)
T 1z1y_A 10 DTICXN-GQLVQMSNHFXCMCNEGLVHLSENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDT 88 (186)
T ss_dssp TCCCBT-EEEEECSSCEEEEECTTEEEEETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETTE
T ss_pred CCCCCC-CEeECCCCCeEeECCCCCccCCCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCCC
Confidence 578985 599999999999999999987444688999998 67899999999998 89999999999997643
Q ss_pred CCCCCCCCCCCCCCCCCCCEEecCCCCCccCCCCccCcccCCCCcccCCCcCCCCCCCCCCCCCceee----ecCCCeee
Q psy9424 316 AGCVSASQCTRDDQCPPGAHCVKTDGVPKCKASCQSDEECGLGEKCLQGQCNNPCERQGACGVNSLCN----VLTHRKVC 391 (535)
Q Consensus 316 ~~C~~~~~C~~~~~C~~~~~C~~~~g~~~C~~~C~~~~eC~~~~~C~~~~C~~~C~~~~~C~~~~~C~----~~~g~~~C 391 (535)
|. +++|.. ..|.++++|+ ++.++|+|
T Consensus 89 --C~-~d~C~~-----------------------------------------------~~C~~~g~C~~~~~~~~g~~~C 118 (186)
T 1z1y_A 89 --CV-LDVCQY-----------------------------------------------XNCGESGECIVEYLSEIQSAGC 118 (186)
T ss_dssp --EE-EGGGTT-----------------------------------------------CCCCTTEEEEEEEETTEEEEEE
T ss_pred --CC-CCcCcC-----------------------------------------------CCCCCCCEEeeCCcCCCCCceE
Confidence 32 334421 1355566776 77789999
Q ss_pred eCCCCCcCCCCCCCCccCCCCCCcccCCCCCccCCCCCCCCCcCCCCCCCCCCcCCCCCcCCCCCCCC-CCCCeeeeCCC
Q psy9424 392 FCPRGFTGDPETECVRITCLSHADCYPGGGSLCLANLCTRGCSADTDCPAALSCRSAECVDPCSPAPC-GPNAQCSVANH 470 (535)
Q Consensus 392 ~C~~G~~g~~~~~C~~~~C~~~~~C~~~~g~~C~~g~C~~g~~~~~~C~~g~~C~~~~c~d~C~~~~C-~~~~~C~~~~g 470 (535)
.|++||+|... .+..|++.. +++|. .+| .++++|+++.+
T Consensus 119 ~C~~Gy~g~~~--------------------------------------~~~~C~~~~-~~~C~-~~C~~~~~~C~n~~g 158 (186)
T 1z1y_A 119 SCAIGXVPNPE--------------------------------------DEXXCTXTG-ETACQ-LXCNTDNEVCXNVEG 158 (186)
T ss_dssp EECTEEEEETT--------------------------------------TTTEEEEEE-CCCCC-CCCCTTTEEEEEETT
T ss_pred ECCCCCcccCC--------------------------------------CCCcceEcC-CCccc-ccccccCcceecCCC
Confidence 99999998531 123333300 37785 589 89999999999
Q ss_pred CceeeCCCCCcCCCCC
Q psy9424 471 RPLCSCPAGLMGLPSA 486 (535)
Q Consensus 471 ~~~C~C~~G~~G~~c~ 486 (535)
+|+|+|++||+|..+.
T Consensus 159 ~y~C~C~~G~~g~~~~ 174 (186)
T 1z1y_A 159 VYXCQCMEGFTFDXEX 174 (186)
T ss_dssp EEEEEECTTCEEETTT
T ss_pred CeeeECCCCCccCccc
Confidence 9999999999999876
No 2
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.74 E-value=4.9e-18 Score=148.85 Aligned_cols=121 Identities=27% Similarity=0.631 Sum_probs=100.4
Q ss_pred ccCCCC--CCCCCCCCeeccCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q psy9424 142 CRPACE--GILCGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRV 219 (535)
Q Consensus 142 c~~~C~--~~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~ 219 (535)
++|+|+ .++|.++++|+++.++|+|+|++||+|..|+
T Consensus 4 dideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~----------------------------------------- 42 (135)
T 2vj3_A 4 DVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCE----------------------------------------- 42 (135)
T ss_dssp CCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEESTTSC-----------------------------------------
T ss_pred ccccccCCCCCCCCCCEeECCCCCEEEECCCCCcCCccc-----------------------------------------
Confidence 478997 5899999999999999999999999998843
Q ss_pred cCCCCCCCCCCCcccCCCcccCCCCCCCCCCCCccccCCCCeeeeCCCCCccCCCCCCe-eCCcCCCCCCCCCCeeecCC
Q psy9424 220 ECNSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCH-LIDFCAAKPCGPGARCDNSR 298 (535)
Q Consensus 220 ~C~~~~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~~~~C~-~~~~C~~~~C~~~~~C~~~~ 298 (535)
.++++|. ..+|.++++|++..++|+|.|++||+|. .|+ ++++|...+|.++++|++..
T Consensus 43 --~~~~~C~----------------~~~C~~~~~C~~~~g~~~C~C~~G~~G~---~C~~~~~~C~~~~C~~~g~C~~~~ 101 (135)
T 2vj3_A 43 --IDVNECV----------------SNPCQNDATCLDQIGEFQCICMPGYEGV---HCEVNTDECASSPCLHNGRCLDKI 101 (135)
T ss_dssp --EECCTTT----------------TCCCCSSCEEEECSSCEEEECCTTEESS---SSCEECCTTTTCCSTTTCEEEECS
T ss_pred --ccCccCC----------------CCCCCCCCEEeCCCCCceeeCCCCCcCC---cceecCCcccCCCcCCCCEeECCC
Confidence 1234553 3678889999999999999999999999 564 68999999999999999999
Q ss_pred CCeeeeCCCCCccCCCCCCCCCCCCCCCC
Q psy9424 299 GSYKCLCPLGLVGDPYGAGCVSASQCTRD 327 (535)
Q Consensus 299 g~~~C~C~~Gy~g~~c~~~C~~~~~C~~~ 327 (535)
++|+|.|++||+|..++. ++++|...
T Consensus 102 g~~~C~C~~G~~G~~C~~---~i~~C~~~ 127 (135)
T 2vj3_A 102 NEFQCECPTGFTGHLCQV---DLHHILDA 127 (135)
T ss_dssp SCEEEECCTTEESSSSCE---ECC-----
T ss_pred CCeEEECCCCCcCCccCc---cCccccCC
Confidence 999999999999988653 67888653
No 3
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.74 E-value=2.3e-19 Score=166.40 Aligned_cols=154 Identities=27% Similarity=0.598 Sum_probs=117.5
Q ss_pred CCCCCCCCCeeccCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCC
Q psy9424 147 EGILCGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECNSHAD 226 (535)
Q Consensus 147 ~~~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~C~~~~~ 226 (535)
.++||. +++|+++.++|+|.|++||+|.. ...|+++++
T Consensus 9 ~~~pC~-ng~C~~~~g~~~C~C~~G~~g~~-----------------------------------------~~~C~~id~ 46 (186)
T 1z1y_A 9 VDTICX-NGQLVQMSNHFXCMCNEGLVHLS-----------------------------------------ENTCEEXNE 46 (186)
T ss_dssp TTCCCB-TEEEEECSSCEEEEECTTEEEEE-----------------------------------------TTEEEECCC
T ss_pred CCCCCC-CCEeECCCCCeEeECCCCCccCC-----------------------------------------CCccCCCCc
Confidence 447888 56999999999999999999873 023555677
Q ss_pred CCCCCcccCCCcccCCCCCCCCCCCCccccCC-----CCeeeeCCCCCccCCCCCCeeCCcCCCCCCCCCCeee----cC
Q psy9424 227 CSGDKVCEDHRCKISCLANNPCGPNALCSAEK-----HKQICYCQPGYTGDAYFGCHLIDFCAAKPCGPGARCD----NS 297 (535)
Q Consensus 227 C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~-----g~~~C~C~~G~~G~~~~~C~~~~~C~~~~C~~~~~C~----~~ 297 (535)
|.... .+.+|.++++|+++. ++|+|.|++||+|.... |+ +++|...+|.++++|+ +.
T Consensus 47 C~~~~------------~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~~-C~-~d~C~~~~C~~~g~C~~~~~~~ 112 (186)
T 1z1y_A 47 CXXET------------LGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDT-CV-LDVCQYXNCGESGECIVEYLSE 112 (186)
T ss_dssp CSGGG------------TTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETTE-EE-EGGGTTCCCCTTEEEEEEEETT
T ss_pred ccCCC------------CCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCCC-CC-CCcCcCCCCCCCCEEeeCCcCC
Confidence 65210 026799899999998 89999999999998653 55 7999999999999999 88
Q ss_pred CCCeeeeCCCCCccCCC-CCCCCCCCCCCCCCCCCCCCEEecCCCCCccCCCCccCcccCCCCcccCCCcCCCCCCCCCC
Q psy9424 298 RGSYKCLCPLGLVGDPY-GAGCVSASQCTRDDQCPPGAHCVKTDGVPKCKASCQSDEECGLGEKCLQGQCNNPCERQGAC 376 (535)
Q Consensus 298 ~g~~~C~C~~Gy~g~~c-~~~C~~~~~C~~~~~C~~~~~C~~~~g~~~C~~~C~~~~eC~~~~~C~~~~C~~~C~~~~~C 376 (535)
.++|+|.|++||+|... .+.|+++ + .++|. ..|
T Consensus 113 ~g~~~C~C~~Gy~g~~~~~~~C~~~-------------------------------~-------------~~~C~--~~C 146 (186)
T 1z1y_A 113 IQSAGCSCAIGXVPNPEDEXXCTXT-------------------------------G-------------ETACQ--LXC 146 (186)
T ss_dssp EEEEEEEECTEEEEETTTTTEEEEE-------------------------------E-------------CCCCC--CCC
T ss_pred CCCceEECCCCCcccCCCCCcceEc-------------------------------C-------------CCccc--ccc
Confidence 88999999999998431 1112221 0 11222 156
Q ss_pred -CCCceeeecCCCeeeeCCCCCcCCCC
Q psy9424 377 -GVNSLCNVLTHRKVCFCPRGFTGDPE 402 (535)
Q Consensus 377 -~~~~~C~~~~g~~~C~C~~G~~g~~~ 402 (535)
.++++|+++.++|+|.|++||+|+.+
T Consensus 147 ~~~~~~C~n~~g~y~C~C~~G~~g~~~ 173 (186)
T 1z1y_A 147 NTDNEVCXNVEGVYXCQCMEGFTFDXE 173 (186)
T ss_dssp CTTTEEEEEETTEEEEEECTTCEEETT
T ss_pred cccCcceecCCCCeeeECCCCCccCcc
Confidence 56789999999999999999999874
No 4
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.72 E-value=4.9e-22 Score=190.03 Aligned_cols=244 Identities=11% Similarity=-0.006 Sum_probs=158.3
Q ss_pred CccCCCC---CCCcccCcCCcCCCCCCCCCCCCCCeeeecCCCceeeCCCCCcCCCCCCCCCCCCCCCCCCCCCCCcccc
Q psy9424 14 HLQQVPG---LASAACVDGRCRNPCEADEVCGRNAECAVVNHTPRCTCVAGTVGDPKYQSGVGTSCTSSRDCIGEQQCIS 90 (535)
Q Consensus 14 ~c~c~~g---~~g~~C~~~~~~d~C~~~~~C~~~g~C~~~~~~~~C~C~~Gf~G~~c~~C~~~~~C~~~~~C~~~~~C~~ 90 (535)
.+.+.|| |.|..+... ++++. .+|.++|+|++..++|+|.|++||+|..+. .++++|..
T Consensus 14 s~~~~pgg~~~~g~~~~~n--~~~~~--~~c~ngG~C~~g~~~y~C~Cp~Gf~G~~Ce--------------~ni~ec~~ 75 (267)
T 4fbr_A 14 QATWNPGGLWLIGARDKQN--VVALD--IKSDDGGKTLKGTMTYNGEGPIGFRGTLSS--------------ANNYTVEN 75 (267)
T ss_dssp TSCCEEEEEEECCCCSSCC--EEEEE--EECSSTTSEEEEEEEETTSCCEEEEEEECS--------------TTEEEEEE
T ss_pred cCCcCCCCceeeccccccc--cccCC--CCcCCCCeecCCCCCeEEeCCCCccccccc--------------cccccccc
Confidence 3667777 778888764 55554 589999999999999999999999999543 23334332
Q ss_pred CccCCCCCCCCCCCCCCCccCCCCCCCCccccCCCCCCCCccCCCCCCCCcccCCCCCCCCCCCCeeccCCCCceecCCC
Q psy9424 91 GLCQPTCRSNTTCPAQHYCNSGLCVLEMQCTTHDQCSATEQCRSNDMGQMQCRPACEGILCGRNALCTASDHHATCSCKP 170 (535)
Q Consensus 91 ~~c~~~C~~~~~C~~~~~c~~~~C~~g~~C~~~~~c~~~~~C~~~~~G~~~c~~~C~~~~C~~~g~C~~~~~~~~C~C~~ 170 (535)
...+.+.+|.++++|... ..|.. +++|++.||.++++|++...+|+|.|++
T Consensus 76 ---------------~~~c~s~pC~nggtc~~G------~~c~~--------~~eC~s~pC~ngG~C~~~~~sy~C~C~~ 126 (267)
T 4fbr_A 76 ---------------QWGGTSAPWQPGGVWVLG------ARDKQ--------NIVAVSIKSNDGGKTLTGTTTYNGEGPI 126 (267)
T ss_dssp ---------------ESSSTTSCEEEEEEEECC------CCSSC--------CEEEEEEECSSTTSEEEEEEEETTSCCE
T ss_pred ---------------ccCcCCCcccCCCeeecc------Ccccc--------ccccCCCCCCCCCEEecCCccEEeeCCC
Confidence 233455666666665332 23332 4689889999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCCCCcccCCCcccCCCCCCCCCC
Q psy9424 171 GYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECNSHADCSGDKVCEDHRCKISCLANNPCGP 250 (535)
Q Consensus 171 Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~C~~~~~C~~~~~C~~~~c~~~c~~~~~C~~ 250 (535)
||+|..|++.. . .|++..-|. +.+|.+
T Consensus 127 Gf~G~~Ce~~~--------------------------------d-----~C~n~~~c~----------------s~pC~n 153 (267)
T 4fbr_A 127 GFKSEVTDGDT--------------------------------Y-----SVENQWGGS----------------AAPWHS 153 (267)
T ss_dssp EEEEEECCCCE--------------------------------E-----EEEEECSST----------------TSCCEE
T ss_pred CccccCCCCCc--------------------------------c-----cccccCCcC----------------CccccC
Confidence 99999975210 1 122111111 345554
Q ss_pred CCccccCCCCeeeeCCCCCccCCCCCCeeCCcCCCCCCCCCCeeecCCCCeeeeCCCCCccCCCCCCCCCCCCCCC----
Q psy9424 251 NALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAAKPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVSASQCTR---- 326 (535)
Q Consensus 251 ~~~C~~~~g~~~C~C~~G~~G~~~~~C~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C~~~~~C~~---- 326 (535)
.++|+ .|. +|.....+.+.+|.++++|++...+|+|.|++||+|..++. +++++..
T Consensus 154 gg~c~--------------~G~---~c~~~i~c~~~~c~ngg~C~dg~~~y~C~Cp~Gf~G~~c~~---~i~ec~~~~~c 213 (267)
T 4fbr_A 154 GGVWV--------------LGT---RGKQNVINVDAKSNDGGKTLSGTMTYNGEGPIGFRGTLTSP---DTYTVENQWGG 213 (267)
T ss_dssp EEEEE--------------CCS---STTSCEEEEEEECSSTTSEEEEEEEETTSCCEEEEEEEEET---TEEEEEEECSC
T ss_pred Cccee--------------ccc---ccccccccCCCCCCCCCEeeCCCCCeEEeCCCCcccccccc---ccceeccCCCc
Confidence 44443 244 23332345567788889998888889999999999887653 4444321
Q ss_pred -CCCCCCCCEEecCCCCCccCCCCccCcccCCCCcccCCCcCCCCCCCCCCCCCceeeecCCCeeeeCCCCCcCC
Q psy9424 327 -DDQCPPGAHCVKTDGVPKCKASCQSDEECGLGEKCLQGQCNNPCERQGACGVNSLCNVLTHRKVCFCPRGFTGD 400 (535)
Q Consensus 327 -~~~C~~~~~C~~~~g~~~C~~~C~~~~eC~~~~~C~~~~C~~~C~~~~~C~~~~~C~~~~g~~~C~C~~G~~g~ 400 (535)
..+|++++.++. . |.+... ...| ...|.++++|++...+|.|.||+||+|.
T Consensus 214 ~~~~c~~gG~~~~-------~--C~~g~n---~~~c-----------~~~c~ngGtC~dg~~sy~CeCp~GF~G~ 265 (267)
T 4fbr_A 214 STAPWNPGGFWMI-------G--ARNGQN---VVAL-----------NVASSDGGKTLAGTMIYNGEGPIGFRAR 265 (267)
T ss_dssp TTSCCEEEEEEEC-------C--CCTTCC---EEEE-----------EEECSSTTSEEEEEEEETTSCCEEEEEE
T ss_pred cCCcccCCCeEEE-------e--cCCCCc---cccC-----------CcCCCCCCEeeCCCcceeecCCCCcccc
Confidence 133444433321 1 222211 0011 1256678899998899999999999985
No 5
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.70 E-value=3.4e-21 Score=184.28 Aligned_cols=213 Identities=10% Similarity=0.035 Sum_probs=146.6
Q ss_pred CCCCCCCeeccCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCC
Q psy9424 149 ILCGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECNSHADCS 228 (535)
Q Consensus 149 ~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~C~~~~~C~ 228 (535)
.+|.++|+|++..++|+|.|++||+|..|++.. ..|.+..-|.
T Consensus 38 ~~c~ngG~C~~g~~~y~C~Cp~Gf~G~~Ce~ni-------------------------------------~ec~~~~~c~ 80 (267)
T 4fbr_A 38 IKSDDGGKTLKGTMTYNGEGPIGFRGTLSSANN-------------------------------------YTVENQWGGT 80 (267)
T ss_dssp EECSSTTSEEEEEEEETTSCCEEEEEEECSTTE-------------------------------------EEEEEESSST
T ss_pred CCcCCCCeecCCCCCeEEeCCCCcccccccccc-------------------------------------cccccccCcC
Confidence 478899999999999999999999999975310 0111111121
Q ss_pred CCCcccCCCcccCCCCCCCCCCCCccccCCCCeeeeCCCCCccCCCCCCeeCCcCCCCCCCCCCeeecCCCCeeeeCCCC
Q psy9424 229 GDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAAKPCGPGARCDNSRGSYKCLCPLG 308 (535)
Q Consensus 229 ~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~~~~C~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G 308 (535)
+.||.++++| |+|. .|+..++|++.||.++++|++...+|+|.|++|
T Consensus 81 ----------------s~pC~nggtc--------------~~G~---~c~~~~eC~s~pC~ngG~C~~~~~sy~C~C~~G 127 (267)
T 4fbr_A 81 ----------------SAPWQPGGVW--------------VLGA---RDKQNIVAVSIKSNDGGKTLTGTTTYNGEGPIG 127 (267)
T ss_dssp ----------------TSCEEEEEEE--------------ECCC---CSSCCEEEEEEECSSTTSEEEEEEEETTSCCEE
T ss_pred ----------------CCcccCCCee--------------eccC---ccccccccCCCCCCCCCEEecCCccEEeeCCCC
Confidence 4666666554 3455 566777999999999999999999999999999
Q ss_pred CccCCCCCCCCCCCCCC-----CCCCCCCCCEEecCCCCCccCCCCccCcccCCCCcccCCCcCCCCCCCCCCCCCceee
Q psy9424 309 LVGDPYGAGCVSASQCT-----RDDQCPPGAHCVKTDGVPKCKASCQSDEECGLGEKCLQGQCNNPCERQGACGVNSLCN 383 (535)
Q Consensus 309 y~g~~c~~~C~~~~~C~-----~~~~C~~~~~C~~~~g~~~C~~~C~~~~eC~~~~~C~~~~C~~~C~~~~~C~~~~~C~ 383 (535)
|+|..++. ++++|. ...+|++.++|+.... |+...++ . ...|.++++|+
T Consensus 128 f~G~~Ce~---~~d~C~n~~~c~s~pC~ngg~c~~G~~-------c~~~i~c------~----------~~~c~ngg~C~ 181 (267)
T 4fbr_A 128 FKSEVTDG---DTYSVENQWGGSAAPWHSGGVWVLGTR-------GKQNVIN------V----------DAKSNDGGKTL 181 (267)
T ss_dssp EEEEECCC---CEEEEEEECSSTTSCCEEEEEEECCSS-------TTSCEEE------E----------EEECSSTTSEE
T ss_pred ccccCCCC---CcccccccCCcCCccccCCcceecccc-------ccccccc------C----------CCCCCCCCEee
Confidence 99998874 344532 1246777666654211 2211111 1 23577789999
Q ss_pred ecCCCeeeeCCCCCcCCCC----CC------CCccCCCCCCcccCCCCCccCCCCCCCCCcCCCCCCCCCCcCCCCCcCC
Q psy9424 384 VLTHRKVCFCPRGFTGDPE----TE------CVRITCLSHADCYPGGGSLCLANLCTRGCSADTDCPAALSCRSAECVDP 453 (535)
Q Consensus 384 ~~~g~~~C~C~~G~~g~~~----~~------C~~~~C~~~~~C~~~~g~~C~~g~C~~g~~~~~~C~~g~~C~~~~c~d~ 453 (535)
+..++|+|.|++||+|..+ ++ +...+|.+++.+... |..++ . ++.
T Consensus 182 dg~~~y~C~Cp~Gf~G~~c~~~i~ec~~~~~c~~~~c~~gG~~~~~---------C~~g~----------n------~~~ 236 (267)
T 4fbr_A 182 SGTMTYNGEGPIGFRGTLTSPDTYTVENQWGGSTAPWNPGGFWMIG---------ARNGQ----------N------VVA 236 (267)
T ss_dssp EEEEEETTSCCEEEEEEEEETTEEEEEEECSCTTSCCEEEEEEECC---------CCTTC----------C------EEE
T ss_pred CCCCCeEEeCCCCccccccccccceeccCCCccCCcccCCCeEEEe---------cCCCC----------c------ccc
Confidence 9999999999999999874 23 222344444433221 33332 1 222
Q ss_pred CCCCCCCCCCeeeeCCCCceeeCCCCCcCC
Q psy9424 454 CSPAPCGPNAQCSVANHRPLCSCPAGLMGL 483 (535)
Q Consensus 454 C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~ 483 (535)
| ..+|.++|+|++...+|.|+||+||+|.
T Consensus 237 c-~~~c~ngGtC~dg~~sy~CeCp~GF~G~ 265 (267)
T 4fbr_A 237 L-NVASSDGGKTLAGTMIYNGEGPIGFRAR 265 (267)
T ss_dssp E-EEECSSTTSEEEEEEEETTSCCEEEEEE
T ss_pred C-CcCCCCCCEeeCCCcceeecCCCCcccc
Confidence 2 4579999999999999999999999985
No 6
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.67 E-value=1.5e-16 Score=140.90 Aligned_cols=123 Identities=24% Similarity=0.595 Sum_probs=95.4
Q ss_pred CCCCCCCCCCCCeeccCC--CCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q psy9424 144 PACEGILCGRNALCTASD--HHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVEC 221 (535)
Q Consensus 144 ~~C~~~~C~~~g~C~~~~--~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~C 221 (535)
|+|..+||.++++|+++. ++|+|+|++||+|..|+..... .-....|
T Consensus 1 d~C~~~pC~~~g~C~~~~~~g~~~C~C~~G~~G~~C~~~~~~-------------------------------~~~~~~c 49 (143)
T 4d90_A 1 DICDPNPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEV-------------------------------ASDEEEP 49 (143)
T ss_dssp --CCSCCCGGGCEEEC-----CCEEECCTTCCTTTTCSCCCC-------------------------------TTTTTSC
T ss_pred CcCCCCcCCCCCEeeCCCCCCCEEeECCCCCCCCCCccCccc-------------------------------ccccccc
Confidence 468889999999999876 6899999999999997531100 0001123
Q ss_pred CCCCCCCCCCcccCCCcccCCCCCCCCCCCCccc-------cCCCCeeeeCCCCCccCCCCCCe-eCCcCCCCCCCCCCe
Q psy9424 222 NSHADCSGDKVCEDHRCKISCLANNPCGPNALCS-------AEKHKQICYCQPGYTGDAYFGCH-LIDFCAAKPCGPGAR 293 (535)
Q Consensus 222 ~~~~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~-------~~~g~~~C~C~~G~~G~~~~~C~-~~~~C~~~~C~~~~~ 293 (535)
.++++|. +.+|.++++|+ ++.++|+|.|++||+|. .|+ ++++|...+|.++++
T Consensus 50 ~~~~~C~----------------~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G~---~C~~~i~~C~~~~C~~~~~ 110 (143)
T 4d90_A 50 TSAGPCT----------------PNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGI---HCQHNINECEVEPCKNGGI 110 (143)
T ss_dssp CCCCTTS----------------SCCCCTTCEEEECCCEETTEECCEEEECCTTEEST---TSCEECCTTTTCCSCTTCE
T ss_pred ccCCcCC----------------CCCCCCCCEecCCCccccCCCCCeEeECcCCCcCC---CcccCCCcCCCCCCCCCCE
Confidence 3444553 47799999998 66789999999999999 676 899999999999999
Q ss_pred eecCCCCeeeeCCCCCccCCCCC
Q psy9424 294 CDNSRGSYKCLCPLGLVGDPYGA 316 (535)
Q Consensus 294 C~~~~g~~~C~C~~Gy~g~~c~~ 316 (535)
|++..++|+|.|++||+|+.++.
T Consensus 111 C~~~~g~~~C~C~~G~~G~~c~~ 133 (143)
T 4d90_A 111 CTDLVANYSCECPGEFMGRNCQY 133 (143)
T ss_dssp EEEETTEEEEECCTTCBSTTSCB
T ss_pred eECCCCCeEeECCCCCccCCcee
Confidence 99999999999999999998763
No 7
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.66 E-value=1.5e-16 Score=139.33 Aligned_cols=102 Identities=28% Similarity=0.652 Sum_probs=91.2
Q ss_pred CCCCCCCceeeecCCCeeeeCCCCCcCCCC----CCCCccCCCCCCcccCCCC-CccCCCCCCCCCcCCCCCCCCCCcCC
Q psy9424 373 QGACGVNSLCNVLTHRKVCFCPRGFTGDPE----TECVRITCLSHADCYPGGG-SLCLANLCTRGCSADTDCPAALSCRS 447 (535)
Q Consensus 373 ~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~----~~C~~~~C~~~~~C~~~~g-~~C~~g~C~~g~~~~~~C~~g~~C~~ 447 (535)
..+|.++++|+++.++|+|+|++||+|..+ ++|...+|.++++|++..+ |.|. |++|| .|..|+.
T Consensus 12 ~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~---C~~G~-------~G~~C~~ 81 (135)
T 2vj3_A 12 ANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCI---CMPGY-------EGVHCEV 81 (135)
T ss_dssp SCSSSTTCEEEECSSSEEEECCTTEESTTSCEECCTTTTCCCCSSCEEEECSSCEEEE---CCTTE-------ESSSSCE
T ss_pred CCCCCCCCEeECCCCCEEEECCCCCcCCcccccCccCCCCCCCCCCEEeCCCCCceee---CCCCC-------cCCccee
Confidence 357778899999999999999999999876 4788789999999998875 7898 99999 6788874
Q ss_pred CCCcCCCCCCCCCCCCeeeeCCCCceeeCCCCCcCCCCC
Q psy9424 448 AECVDPCSPAPCGPNAQCSVANHRPLCSCPAGLMGLPSA 486 (535)
Q Consensus 448 ~~c~d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~ 486 (535)
. +++|...+|.++++|++..++|+|+|++||+|..|+
T Consensus 82 ~--~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~G~~C~ 118 (135)
T 2vj3_A 82 N--TDECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQ 118 (135)
T ss_dssp E--CCTTTTCCSTTTCEEEECSSCEEEECCTTEESSSSC
T ss_pred c--CCcccCCCcCCCCEeECCCCCeEEECCCCCcCCccC
Confidence 4 899998999999999999999999999999999886
No 8
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.62 E-value=1.3e-16 Score=145.16 Aligned_cols=61 Identities=30% Similarity=0.890 Sum_probs=50.6
Q ss_pred CCCCCccccCCCCeeeeCCCCCccCCCCCCe-eCCcCCC-CCCCCCCeeecC-CCCeeeeCCCCCccCCCC
Q psy9424 248 CGPNALCSAEKHKQICYCQPGYTGDAYFGCH-LIDFCAA-KPCGPGARCDNS-RGSYKCLCPLGLVGDPYG 315 (535)
Q Consensus 248 C~~~~~C~~~~g~~~C~C~~G~~G~~~~~C~-~~~~C~~-~~C~~~~~C~~~-~g~~~C~C~~Gy~g~~c~ 315 (535)
|.+ ++|+ ++|+|+|++||+|. .|+ ++++|.. .+|.++++|+++ +++|+|+|++||+|..++
T Consensus 105 C~~-g~C~---~~~~C~C~~G~~G~---~C~~~~~~C~~~~~C~~~g~C~~~~~~~~~C~C~~G~~G~~Ce 168 (169)
T 2vj2_A 105 CVH-GICN---EPWQCLCETNWGGQ---LCDKDLNYCGTHQPCLNGGTCSNTGPDKYQCSCPEGYSGPNCE 168 (169)
T ss_dssp CSS-EECS---STTCCEECTTEETT---TTCEESCHHHHTCCCCTTCEEEECSTTCEEEECCTTCCSTTSC
T ss_pred CCC-CCcC---CCCEEeCCCCCCCC---cccCCCCCCCCCCCCCCCCEEcCCCCCCcEeECCCCCcCcCcC
Confidence 554 4776 46789999999998 565 7888975 789999999986 789999999999998765
No 9
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.59 E-value=9.8e-16 Score=135.57 Aligned_cols=125 Identities=23% Similarity=0.561 Sum_probs=97.8
Q ss_pred CCCCCCCeeccCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCC
Q psy9424 149 ILCGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECNSHADCS 228 (535)
Q Consensus 149 ~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~C~~~~~C~ 228 (535)
++|.++++|+++ |+|+|++||+|.. ++. .-....|+++++|.
T Consensus 7 ~~C~~~~~C~~~---~~C~C~~G~~g~~-~~~----------------------------------~~~~~~C~dideC~ 48 (143)
T 2bou_A 7 RWCPQDSSCVNA---TACRCNPGFSSFS-EII----------------------------------TTPMETCDDINECA 48 (143)
T ss_dssp TTCCTTEEESSS---SCEEECTTEECSS-SSB----------------------------------CSTTCCCEECCGGG
T ss_pred CcCCCCCEEcCC---CEEeCCCCCcCcc-ccc----------------------------------cCCCCcCCcccccc
Confidence 578889999985 8999999999864 000 00013466667775
Q ss_pred CCCcccCCCcccCCCCCCCCCCCCccccCCCCeeeeCCCCCccCCC---------CCCeeCCcCCC--CCCCCCCeeecC
Q psy9424 229 GDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGDAY---------FGCHLIDFCAA--KPCGPGARCDNS 297 (535)
Q Consensus 229 ~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~~---------~~C~~~~~C~~--~~C~~~~~C~~~ 297 (535)
... ..+|.++++|+++.++|+|.|++||+|... ..|+++++|.. .+|.++++|+++
T Consensus 49 ~~~-------------~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~~~~~~~~~C~dideC~~~~~~C~~~~~C~n~ 115 (143)
T 2bou_A 49 TLS-------------KVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQDVDECSSGQHQCDSSTVCFNT 115 (143)
T ss_dssp C-----------------CCCTTEEEEECSSCEEEEECTTEEETTCCSCBSSGGGCCEEECCHHHHTCCCCCTTSEEEEC
T ss_pred CCC-------------CCCCCCCCEEEcCCCCeEeECCCCcccCcCccccccCCCCCcCCccCccCcCCCCCCCCEEECC
Confidence 320 137998999999999999999999998743 26889999974 789999999999
Q ss_pred CCCeeeeCCCCCccCCCCCCCCCCCCC
Q psy9424 298 RGSYKCLCPLGLVGDPYGAGCVSASQC 324 (535)
Q Consensus 298 ~g~~~C~C~~Gy~g~~c~~~C~~~~~C 324 (535)
.++|+|.|++||+|....+.|+.+++|
T Consensus 116 ~g~y~C~C~~Gy~g~~~~~~C~~~~~C 142 (143)
T 2bou_A 116 VGSYSCRCRPGWKPRHGIPNNQKDTVC 142 (143)
T ss_dssp SSCEEEECCSSSCBCTTCCSSBTTCCB
T ss_pred CCCEEeeCCCCcccCCCCccCccCCcc
Confidence 999999999999999988777776665
No 10
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.58 E-value=6.7e-15 Score=130.15 Aligned_cols=122 Identities=18% Similarity=0.422 Sum_probs=89.1
Q ss_pred CCCCCCCCCCCCCeeeecC--CCceeeCCCCCcCCCCCCCCCCCCCCCCCCCCCCCccccCccCCCCCCCCCCCCCCCcc
Q psy9424 33 NPCEADEVCGRNAECAVVN--HTPRCTCVAGTVGDPKYQSGVGTSCTSSRDCIGEQQCISGLCQPTCRSNTTCPAQHYCN 110 (535)
Q Consensus 33 d~C~~~~~C~~~g~C~~~~--~~~~C~C~~Gf~G~~c~~C~~~~~C~~~~~C~~~~~C~~~~c~~~C~~~~~C~~~~~c~ 110 (535)
|+|. .++|.++|+|+++. ++|+|+|++||+|..+. .+.++...
T Consensus 1 d~C~-~~pC~~~g~C~~~~~~g~~~C~C~~G~~G~~C~---------------~~~~~~~~------------------- 45 (143)
T 4d90_A 1 DICD-PNPCENGGICLPGLADGSFSCECPDGFTDPNCS---------------SVVEVASD------------------- 45 (143)
T ss_dssp --CC-SCCCGGGCEEEC-----CCEEECCTTCCTTTTC---------------SCCCCTTT-------------------
T ss_pred CcCC-CCcCCCCCEeeCCCCCCCEEeECCCCCCCCCCc---------------cCcccccc-------------------
Confidence 4676 78999999999865 68999999999998433 11111000
Q ss_pred CCCCCCCCccccCCCCCCCCccCCCCCCCCcccCCCCCCCCCCCCeec-------cCCCCceecCCCCCCCCCCCCCCCC
Q psy9424 111 SGLCVLEMQCTTHDQCSATEQCRSNDMGQMQCRPACEGILCGRNALCT-------ASDHHATCSCKPGYVGHPGPSMGTG 183 (535)
Q Consensus 111 ~~~C~~g~~C~~~~~c~~~~~C~~~~~G~~~c~~~C~~~~C~~~g~C~-------~~~~~~~C~C~~Gf~g~~c~~~~~~ 183 (535)
...|. .+++|..++|.++++|+ ++.++|+|+|++||+|..|+
T Consensus 46 ------------------~~~c~--------~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G~~C~----- 94 (143)
T 4d90_A 46 ------------------EEEPT--------SAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQ----- 94 (143)
T ss_dssp ------------------TTSCC--------CCCTTSSCCCCTTCEEEECCCEETTEECCEEEECCTTEESTTSC-----
T ss_pred ------------------ccccc--------cCCcCCCCCCCCCCEecCCCccccCCCCCeEeECcCCCcCCCcc-----
Confidence 00111 25678888999999999 66789999999999998842
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCCCCcccCCCcccCCCCCCCCCCCCccccCCCCeee
Q psy9424 184 PSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECNSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQIC 263 (535)
Q Consensus 184 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~C~~~~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C 263 (535)
.++++|. ..+|.++++|+++.++|+|
T Consensus 95 --------------------------------------~~i~~C~----------------~~~C~~~~~C~~~~g~~~C 120 (143)
T 4d90_A 95 --------------------------------------HNINECE----------------VEPCKNGGICTDLVANYSC 120 (143)
T ss_dssp --------------------------------------EECCTTT----------------TCCSCTTCEEEEETTEEEE
T ss_pred --------------------------------------cCCCcCC----------------CCCCCCCCEeECCCCCeEe
Confidence 1455664 3679999999999999999
Q ss_pred eCCCCCccCCC
Q psy9424 264 YCQPGYTGDAY 274 (535)
Q Consensus 264 ~C~~G~~G~~~ 274 (535)
.|++||+|+.+
T Consensus 121 ~C~~G~~G~~c 131 (143)
T 4d90_A 121 ECPGEFMGRNC 131 (143)
T ss_dssp ECCTTCBSTTS
T ss_pred ECCCCCccCCc
Confidence 99999999943
No 11
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.56 E-value=2.6e-15 Score=150.61 Aligned_cols=160 Identities=28% Similarity=0.644 Sum_probs=67.0
Q ss_pred CCCCCCCCCCCCCeeeecCCCceeeCCCCCcCCCCCCCCCCCCCCCCCCCCCCCccccCccCCCCCCCCCCCCCCCccCC
Q psy9424 33 NPCEADEVCGRNAECAVVNHTPRCTCVAGTVGDPKYQSGVGTSCTSSRDCIGEQQCISGLCQPTCRSNTTCPAQHYCNSG 112 (535)
Q Consensus 33 d~C~~~~~C~~~g~C~~~~~~~~C~C~~Gf~G~~c~~C~~~~~C~~~~~C~~~~~C~~~~c~~~C~~~~~C~~~~~c~~~ 112 (535)
++|. .+|.++|+|++ .++|.|++||+|..|+. ..|...|..++.
T Consensus 149 ~~C~--~~C~~~G~C~~---~~~C~C~~G~~G~~C~~---------------------~~C~~~C~~~G~---------- 192 (324)
T 2ygq_A 149 AECP--GGCRNGGFCNE---RRICECPDGFHGPHCEK---------------------ALCTPRCMNGGL---------- 192 (324)
T ss_dssp CCCS--SCCCSSCEECT---TSCEECCTTEESSSSCE---------------------ESSSSCCCTTCE----------
T ss_pred CCCC--CCCCCCCEECC---CCeEECCCCCcCCCCCC---------------------CCCCCCCCCCCE----------
Confidence 3564 68999999986 47999999999985431 011112222222
Q ss_pred CCCCCCccccCCCCCCCCccCCCCCCCCcccCCCCCCCCCCCCeeccCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy9424 113 LCVLEMQCTTHDQCSATEQCRSNDMGQMQCRPACEGILCGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAG 192 (535)
Q Consensus 113 ~C~~g~~C~~~~~c~~~~~C~~~~~G~~~c~~~C~~~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~ 192 (535)
|.. ...+.|.++|+|..+.++.|. .+|.++|+|++. +.|.|++||+|..|++
T Consensus 193 -------C~~----~~~C~C~~G~~G~~C~~~~C~-~~C~~~G~C~~~---~~C~C~~G~~G~~C~~------------- 244 (324)
T 2ygq_A 193 -------CVT----PGFCICPPGFYGVNCDKANCS-TTCFNGGTCFYP---GKCICPPGLEGEQCEI------------- 244 (324)
T ss_dssp -------ECS----SCCEECCTTCBTTTTCBCCCS-SCCCSSCCBSCS---SCBCCCTTCCTTTTC--------------
T ss_pred -------EcC----CCEEeCCCCccCCCcccCcCC-CCCCCCCeeCCC---CeeeCCCCccCCCCCc-------------
Confidence 221 123478888999887777886 689999999874 7899999999998531
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCCCCcccCCCcccCCCCCCCCCCCCccccCCCCeeeeCCCCCccC
Q psy9424 193 GKHGPGLSPGATSHSSHSGGPVGCHRVECNSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGD 272 (535)
Q Consensus 193 ~~~~~~c~~~~~~~~~~~~~~~~C~~~~C~~~~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~C~~G~~G~ 272 (535)
++| ..+|.++++|+. .++|.|.+||+|.
T Consensus 245 --------------------------------~~C-----------------~~~C~~~g~C~~---~~~C~C~~G~~G~ 272 (324)
T 2ygq_A 245 --------------------------------SKC-----------------PQPCRNGGKCIG---KSKCKCSKGYQGD 272 (324)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------CcC-----------------CCcCCCCCEECC---CCEEECCCCCcCC
Confidence 122 256778888974 4689999999999
Q ss_pred CCCCCeeCCcCCCCCCCCCCeeecCCCCeeeeCCCCCccCCCCC
Q psy9424 273 AYFGCHLIDFCAAKPCGPGARCDNSRGSYKCLCPLGLVGDPYGA 316 (535)
Q Consensus 273 ~~~~C~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~ 316 (535)
.|+ +++|. .+|.++++|++ .++|.|++||+|..|+.
T Consensus 273 ---~C~-~~~C~-~~C~~~g~C~~---~~~C~C~~G~~G~~C~~ 308 (324)
T 2ygq_A 273 ---LCS-KPVCE-PGCGAHGTCHE---PNKCQCQEGWHGRHCNK 308 (324)
T ss_dssp --------------------------------------------
T ss_pred ---CCc-CCCCC-CCCCCCCEECC---CCEeECCCCCcCCCCCC
Confidence 555 46675 67989999986 47999999999998774
No 12
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.55 E-value=5.1e-15 Score=148.49 Aligned_cols=154 Identities=27% Similarity=0.732 Sum_probs=66.6
Q ss_pred CCCCCCCCccccCCCCeeeeCCCCCccCCCCCCeeCCcCCCCCCCCCCeeecCCCCeeeeCCCCCccCCCCCCCCCCCCC
Q psy9424 245 NNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAAKPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVSASQC 324 (535)
Q Consensus 245 ~~~C~~~~~C~~~~g~~~C~C~~G~~G~~~~~C~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C~~~~~C 324 (535)
+.+|.++|+|++ .++|.|.+||+|. .|+. +.|. .+|.++++|+. .+.|.|++||+|..|+. +.|
T Consensus 152 ~~~C~~~G~C~~---~~~C~C~~G~~G~---~C~~-~~C~-~~C~~~G~C~~---~~~C~C~~G~~G~~C~~-----~~C 215 (324)
T 2ygq_A 152 PGGCRNGGFCNE---RRICECPDGFHGP---HCEK-ALCT-PRCMNGGLCVT---PGFCICPPGFYGVNCDK-----ANC 215 (324)
T ss_dssp SSCCCSSCEECT---TSCEECCTTEESS---SSCE-ESSS-SCCCTTCEECS---SCCEECCTTCBTTTTCB-----CCC
T ss_pred CCCCCCCCEECC---CCeEECCCCCcCC---CCCC-CCCC-CCCCCCCEEcC---CCEEeCCCCccCCCccc-----CcC
Confidence 367999999975 3689999999999 5554 4574 47999999976 36899999999987652 223
Q ss_pred CCCCCCCCCCEEecCCCCCccCCCCccCcccCCCCcccCCCcCCCCCCCCCCCCCceeeecCCCeeeeCCCCCcCCCCC-
Q psy9424 325 TRDDQCPPGAHCVKTDGVPKCKASCQSDEECGLGEKCLQGQCNNPCERQGACGVNSLCNVLTHRKVCFCPRGFTGDPET- 403 (535)
Q Consensus 325 ~~~~~C~~~~~C~~~~g~~~C~~~C~~~~eC~~~~~C~~~~C~~~C~~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~- 403 (535)
. .+|. ++++|++ .++|.|++||+|..++
T Consensus 216 ~--~~C~----------------------------------------------~~G~C~~---~~~C~C~~G~~G~~C~~ 244 (324)
T 2ygq_A 216 S--TTCF----------------------------------------------NGGTCFY---PGKCICPPGLEGEQCEI 244 (324)
T ss_dssp S--SCCC----------------------------------------------SSCCBSC---SSCBCCCTTCCTTTTC-
T ss_pred C--CCCC----------------------------------------------CCCeeCC---CCeeeCCCCccCCCCCc
Confidence 2 1222 2334433 2589999999999864
Q ss_pred -CCCccCCCCCCcccCCCCCccCCCCCCCCCcCCCCCCCCCCcCCCCCcCCCCCCCCCCCCeeeeCCCCceeeCCCCCcC
Q psy9424 404 -ECVRITCLSHADCYPGGGSLCLANLCTRGCSADTDCPAALSCRSAECVDPCSPAPCGPNAQCSVANHRPLCSCPAGLMG 482 (535)
Q Consensus 404 -~C~~~~C~~~~~C~~~~g~~C~~g~C~~g~~~~~~C~~g~~C~~~~c~d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G 482 (535)
+|. .+|.++|+|+.. +.|. |.+|| .|..|+ +++|. .+|.++|+|++ .++|.|++||+|
T Consensus 245 ~~C~-~~C~~~g~C~~~--~~C~---C~~G~-------~G~~C~----~~~C~-~~C~~~g~C~~---~~~C~C~~G~~G 303 (324)
T 2ygq_A 245 SKCP-QPCRNGGKCIGK--SKCK---CSKGY-------QGDLCS----KPVCE-PGCGAHGTCHE---PNKCQCQEGWHG 303 (324)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcCC-CcCCCCCEECCC--CEEE---CCCCC-------cCCCCc----CCCCC-CCCCCCCEECC---CCEeECCCCCcC
Confidence 453 478999999853 5787 88888 677787 45563 68999999986 479999999999
Q ss_pred CCCC
Q psy9424 483 LPSA 486 (535)
Q Consensus 483 ~~c~ 486 (535)
..|+
T Consensus 304 ~~C~ 307 (324)
T 2ygq_A 304 RHCN 307 (324)
T ss_dssp ----
T ss_pred CCCC
Confidence 9986
No 13
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.55 E-value=1.9e-15 Score=137.43 Aligned_cols=150 Identities=25% Similarity=0.564 Sum_probs=107.3
Q ss_pred CCeeeeCCCCCccCCCCCCeeCCcCCC-CCCCCCCeeecCCCCeeeeCCCCCccCCCCCCCCCCCCCCCCCCCCCCCEEe
Q psy9424 259 HKQICYCQPGYTGDAYFGCHLIDFCAA-KPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVSASQCTRDDQCPPGAHCV 337 (535)
Q Consensus 259 g~~~C~C~~G~~G~~~~~C~~~~~C~~-~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C~~~~~C~~~~~C~~~~~C~ 337 (535)
..+.|.|.+||+|. .|+. +|.+ ..+..+++|.. ..+|+|++||+|..++. ++|.. .|.
T Consensus 15 ~~~~c~C~~g~~G~---~C~~--~C~~~~~c~~~g~C~~---~g~C~C~~G~~G~~C~~-----~~C~~--~C~------ 73 (169)
T 2vj2_A 15 GRSAVTCDDYYYGF---GCNK--FCRPRDDFFGHYACDQ---NGNKTCMEGWMGPECNR-----AICRQ--GCS------ 73 (169)
T ss_dssp ------CCTTEETT---TTCE--ECCCEEETTEEEEECS---SCCEEECTTEESTTSCE-----ECCCT--TCC------
T ss_pred cCeeeeCCCcCcCC---Cccc--ccCCCCCcCCCCEeCC---CCeeECCCCCcCCCCCC-----CCCCC--CCC------
Confidence 45679999999999 4543 4654 25777788864 34799999999987651 22321 111
Q ss_pred cCCCCCccCCCCccCcccCCCCcccCCCcCCCCCCCCCCCCCceeeecCCCeeeeCCCCCcCCCCCCCCccC-CCCCCcc
Q psy9424 338 KTDGVPKCKASCQSDEECGLGEKCLQGQCNNPCERQGACGVNSLCNVLTHRKVCFCPRGFTGDPETECVRIT-CLSHADC 416 (535)
Q Consensus 338 ~~~g~~~C~~~C~~~~eC~~~~~C~~~~C~~~C~~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~C~~~~-C~~~~~C 416 (535)
+ .++.|++ .|+|+|++||+|..+++|...+ |.++ +|
T Consensus 74 --------------------------------------~-~~g~C~~---~~~C~C~~G~~G~~C~~C~~~~~C~~g-~C 110 (169)
T 2vj2_A 74 --------------------------------------P-KHGSCKL---PGDCRCQYGWQGLYCDKCIPHPGCVHG-IC 110 (169)
T ss_dssp --------------------------------------T-TTEECSS---TTCCEECTTEESSSSCEECCCTTCSSE-EC
T ss_pred --------------------------------------C-CCcccCC---CCeeECCCCCCCCCcccCCCCCCCCCC-Cc
Confidence 0 1234433 4689999999999998887765 8754 88
Q ss_pred cCCCCCccCCCCCCCCCcCCCCCCCCCCcCCCCCcCCCC-CCCCCCCCeeeeC-CCCceeeCCCCCcCCCCC
Q psy9424 417 YPGGGSLCLANLCTRGCSADTDCPAALSCRSAECVDPCS-PAPCGPNAQCSVA-NHRPLCSCPAGLMGLPSA 486 (535)
Q Consensus 417 ~~~~g~~C~~g~C~~g~~~~~~C~~g~~C~~~~c~d~C~-~~~C~~~~~C~~~-~g~~~C~C~~G~~G~~c~ 486 (535)
+. .++|. |.+|| .|..|+.. +++|. ..+|.++++|+++ +++|+|+|++||+|..|+
T Consensus 111 ~~--~~~C~---C~~G~-------~G~~C~~~--~~~C~~~~~C~~~g~C~~~~~~~~~C~C~~G~~G~~Ce 168 (169)
T 2vj2_A 111 NE--PWQCL---CETNW-------GGQLCDKD--LNYCGTHQPCLNGGTCSNTGPDKYQCSCPEGYSGPNCE 168 (169)
T ss_dssp SS--TTCCE---ECTTE-------ETTTTCEE--SCHHHHTCCCCTTCEEEECSTTCEEEECCTTCCSTTSC
T ss_pred CC--CCEEe---CCCCC-------CCCcccCC--CCCCCCCCCCCCCCEEcCCCCCCcEeECCCCCcCcCcC
Confidence 83 46888 88888 67888833 88997 4899999999996 899999999999999875
No 14
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.53 E-value=2e-14 Score=154.28 Aligned_cols=132 Identities=23% Similarity=0.497 Sum_probs=106.1
Q ss_pred ccCCCCCCCCCCCCeeccCCC-Ccee-cCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q psy9424 142 CRPACEGILCGRNALCTASDH-HATC-SCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRV 219 (535)
Q Consensus 142 c~~~C~~~~C~~~g~C~~~~~-~~~C-~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~ 219 (535)
.|++|+.+||.++++|+++.+ +|+| .|++||+|.. .
T Consensus 2 DIDeC~~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg------------------------------------------~ 39 (634)
T 1yo8_A 2 DPDGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNG------------------------------------------T 39 (634)
T ss_dssp --CGGGGCCSCTTCCEEECTTSCEEECCCCTTBCSCS------------------------------------------S
T ss_pred cccccCCCCCCCCCEEecCCCCCeECCcCCCccCCCC------------------------------------------C
Confidence 378998899999999999885 4999 9999999865 3
Q ss_pred cCCCCCCCCCCCcccCCCcccCCCCCCCCCCCC---ccccCCCCeeee-CCCCCccCCCC------------CCeeCCcC
Q psy9424 220 ECNSHADCSGDKVCEDHRCKISCLANNPCGPNA---LCSAEKHKQICY-CQPGYTGDAYF------------GCHLIDFC 283 (535)
Q Consensus 220 ~C~~~~~C~~~~~C~~~~c~~~c~~~~~C~~~~---~C~~~~g~~~C~-C~~G~~G~~~~------------~C~~~~~C 283 (535)
.|+++++|... +..|.+++ +|+++.++|+|. |++||+|..++ .|+++++|
T Consensus 40 ~CeDiDEC~~~--------------p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC 105 (634)
T 1yo8_A 40 HCEDLDECALV--------------PDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPC 105 (634)
T ss_dssp SCCBCCTTTTS--------------CCCSCCCSSSCCEEECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCEEECCTT
T ss_pred CccccccccCC--------------CCcccCCccccceeeccCceecccCCCCcccCccccccccccccCCCcccccccc
Confidence 46667887632 34599988 999999999998 99999988542 48889999
Q ss_pred CC--CCCCCCCeeecCC----CCeeeeCCCCCccCCCCCCCC---CCCCCCCC-CCCC
Q psy9424 284 AA--KPCGPGARCDNSR----GSYKCLCPLGLVGDPYGAGCV---SASQCTRD-DQCP 331 (535)
Q Consensus 284 ~~--~~C~~~~~C~~~~----g~~~C~C~~Gy~g~~c~~~C~---~~~~C~~~-~~C~ 331 (535)
.. .+|.++++|+++. ++|+|.|++||+|.. +.|. ++++|... ..|.
T Consensus 106 ~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~GdG--~~Ce~d~DiDeC~~~~~~C~ 161 (634)
T 1yo8_A 106 KDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGDG--LICGEDSDLDGWPNLNLVCA 161 (634)
T ss_dssp TTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEESS--SSEEECTTSSSSCSSCCTTT
T ss_pred cCCCcccccCccccccccccccceeeeccCCccccC--cccccccCcccccCCCCccc
Confidence 75 5899999999998 999999999999853 2353 68888643 4565
No 15
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.52 E-value=1e-14 Score=128.95 Aligned_cols=118 Identities=26% Similarity=0.593 Sum_probs=91.3
Q ss_pred CCCCCCCCccccCCCCeeeeCCCCCccCC------CCCCeeCCcCCCC---CCCCCCeeecCCCCeeeeCCCCCccCCCC
Q psy9424 245 NNPCGPNALCSAEKHKQICYCQPGYTGDA------YFGCHLIDFCAAK---PCGPGARCDNSRGSYKCLCPLGLVGDPYG 315 (535)
Q Consensus 245 ~~~C~~~~~C~~~~g~~~C~C~~G~~G~~------~~~C~~~~~C~~~---~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~ 315 (535)
+.+|.++++|+++ |+|.|++||+|.. ...|+++++|+.. +|.++++|+++.++|+|.|++||+|..+.
T Consensus 6 ~~~C~~~~~C~~~---~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~ 82 (143)
T 2bou_A 6 ARWCPQDSSCVNA---TACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGA 82 (143)
T ss_dssp CTTCCTTEEESSS---SCEEECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCC
T ss_pred cCcCCCCCEEcCC---CEEeCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCc
Confidence 4789999999875 7999999999842 2379999999874 89999999999999999999999998755
Q ss_pred CCCCCCCCCCCCCCCCCCCEEecCCCCCccCCCCccCcccCCCCcccCCCcCCCCCCCCCCCCCceeeecCCCeeeeCCC
Q psy9424 316 AGCVSASQCTRDDQCPPGAHCVKTDGVPKCKASCQSDEECGLGEKCLQGQCNNPCERQGACGVNSLCNVLTHRKVCFCPR 395 (535)
Q Consensus 316 ~~C~~~~~C~~~~~C~~~~~C~~~~g~~~C~~~C~~~~eC~~~~~C~~~~C~~~C~~~~~C~~~~~C~~~~g~~~C~C~~ 395 (535)
+.+.. .. ...|++++||..+ ...|.++++|+++.++|+|.|++
T Consensus 83 ~~~~~------------------~~-----~~~C~dideC~~~--------------~~~C~~~~~C~n~~g~y~C~C~~ 125 (143)
T 2bou_A 83 KTFKN------------------ES-----ENTCQDVDECSSG--------------QHQCDSSTVCFNTVGSYSCRCRP 125 (143)
T ss_dssp SCBSS------------------GG-----GCCEEECCHHHHT--------------CCCCCTTSEEEECSSCEEEECCS
T ss_pred ccccc------------------CC-----CCCcCCccCccCc--------------CCCCCCCCEEECCCCCEEeeCCC
Confidence 31110 00 0125566666532 34677789999999999999999
Q ss_pred CCcCCCC
Q psy9424 396 GFTGDPE 402 (535)
Q Consensus 396 G~~g~~~ 402 (535)
||+|...
T Consensus 126 Gy~g~~~ 132 (143)
T 2bou_A 126 GWKPRHG 132 (143)
T ss_dssp SSCBCTT
T ss_pred CcccCCC
Confidence 9999874
No 16
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=99.52 E-value=1.5e-15 Score=137.40 Aligned_cols=60 Identities=25% Similarity=0.510 Sum_probs=48.7
Q ss_pred CCCeeeeCCC--CCccCCC-CCCeeCCcCCC--CCCCCCCeeecCCCCeeeeCCCCCccCCCCCCC
Q psy9424 258 KHKQICYCQP--GYTGDAY-FGCHLIDFCAA--KPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGC 318 (535)
Q Consensus 258 ~g~~~C~C~~--G~~G~~~-~~C~~~~~C~~--~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C 318 (535)
.++|+|.|++ ||+|... ..|++|++|+. .+|.+ ++|+++.++|+|.|++||+|....++|
T Consensus 97 ~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~-g~C~n~~gsy~C~C~~Gy~g~~d~~~C 161 (162)
T 1uzk_A 97 TSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQG-GKCINTFGSFQCRCPTGYYLNEDTRVC 161 (162)
T ss_dssp SHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBT-SEEEECSSCEEEECCTTCCBCTTTCBB
T ss_pred CCCceeECCCCCCcccCCCCCccCccccccCCCCCcCC-CEeEcCCCCEEeeCCCCccCCCCCCcc
Confidence 4678999988 9998642 25789999975 45975 699999999999999999998766544
No 17
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.48 E-value=8.2e-14 Score=149.63 Aligned_cols=122 Identities=30% Similarity=0.676 Sum_probs=92.4
Q ss_pred CCCCCCCCccccCCC-Ceee-eCCCCCccCCCCCCeeCCcCCCCC--CCCCC---eeecCCCCeeee-CCCCCccCCCCC
Q psy9424 245 NNPCGPNALCSAEKH-KQIC-YCQPGYTGDAYFGCHLIDFCAAKP--CGPGA---RCDNSRGSYKCL-CPLGLVGDPYGA 316 (535)
Q Consensus 245 ~~~C~~~~~C~~~~g-~~~C-~C~~G~~G~~~~~C~~~~~C~~~~--C~~~~---~C~~~~g~~~C~-C~~Gy~g~~c~~ 316 (535)
+.+|.++++|+++.+ +|+| .|++||+|... .|+++++|...+ |.+++ +|+++.++|+|. |++||+|..++.
T Consensus 8 ~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg~-~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~g 86 (634)
T 1yo8_A 8 SNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGT-HCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVG 86 (634)
T ss_dssp GCCSCTTCCEEECTTSCEEECCCCTTBCSCSS-SCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEECCCEE
T ss_pred CCCCCCCCEEecCCCCCeECCcCCCccCCCCC-CccccccccCCCCcccCCccccceeeccCceecccCCCCcccCcccc
Confidence 478999999999885 5999 99999998544 699999998877 99998 999999999999 999999987541
Q ss_pred CCCCCCCCCCCCCCCCCCEEecCCCCCccCCCCccCcccCCCCcccCCCcCCCCCCCCCCCCCceeeecC----CCeeee
Q psy9424 317 GCVSASQCTRDDQCPPGAHCVKTDGVPKCKASCQSDEECGLGEKCLQGQCNNPCERQGACGVNSLCNVLT----HRKVCF 392 (535)
Q Consensus 317 ~C~~~~~C~~~~~C~~~~~C~~~~g~~~C~~~C~~~~eC~~~~~C~~~~C~~~C~~~~~C~~~~~C~~~~----g~~~C~ 392 (535)
..+.... .. ...|++++||... .+.|.++++|+++. ++|+|.
T Consensus 87 --~g~~~~~-----~d-------------g~~C~dideC~~~--------------~~pC~~~~~Cvnt~~~~~GsY~C~ 132 (634)
T 1yo8_A 87 --VGLEAAK-----TE-------------KQVCEPENPCKDK--------------THNCHKHAECIYLGHFSDPMYKCE 132 (634)
T ss_dssp --SSSHHHH-----SC-------------CCCEEECCTTTTT--------------CCCCCTTEEEEECCTTCSSSEEEE
T ss_pred --ccccccc-----cC-------------CCcccccccccCC--------------CcccccCccccccccccccceeee
Confidence 0000000 00 0124445555432 35777889999998 999999
Q ss_pred CCCCCcCCC
Q psy9424 393 CPRGFTGDP 401 (535)
Q Consensus 393 C~~G~~g~~ 401 (535)
|++||+|..
T Consensus 133 C~~Gy~GdG 141 (634)
T 1yo8_A 133 CQTGYAGDG 141 (634)
T ss_dssp ECTTEEESS
T ss_pred ccCCccccC
Confidence 999999864
No 18
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=99.48 E-value=1.4e-15 Score=137.43 Aligned_cols=143 Identities=27% Similarity=0.537 Sum_probs=93.8
Q ss_pred ccCCCCC-CCCCCCCeeccCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q psy9424 142 CRPACEG-ILCGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVE 220 (535)
Q Consensus 142 c~~~C~~-~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~ 220 (535)
+||+|+. ++|. +++|+++.++|+|+|++||++.. .| ..
T Consensus 2 dideC~~~~~C~-~~~C~n~~gsy~C~C~~Gy~~~~---------------------------~g-------------~~ 40 (162)
T 1uzk_A 2 DVNECLDPTTCI-SGNCVNTPGSYICDCPPDFELNP---------------------------TR-------------VG 40 (162)
T ss_dssp CCCGGGSTTSSB-TSEEEEETTEEEEECCTTCEECT---------------------------TS-------------SB
T ss_pred ccccCCCCCCCC-CCEeECCCCCEEEeCCCCCeECC---------------------------CC-------------Cc
Confidence 4889984 8997 79999999999999999999643 00 22
Q ss_pred CCCCCC--CCCCCcccCCCcccCCCCCCCC--CCCCccccCCC----CeeeeCCCCCc-cCCCCCCeeCCcCCCCCCCCC
Q psy9424 221 CNSHAD--CSGDKVCEDHRCKISCLANNPC--GPNALCSAEKH----KQICYCQPGYT-GDAYFGCHLIDFCAAKPCGPG 291 (535)
Q Consensus 221 C~~~~~--C~~~~~C~~~~c~~~c~~~~~C--~~~~~C~~~~g----~~~C~C~~G~~-G~~~~~C~~~~~C~~~~C~~~ 291 (535)
|+++++ |... ..+| ..+++|+++.+ +|+|.|++||. +. .|+. |..
T Consensus 41 C~d~~~~~C~~~--------------~~~c~~~~~~~C~~~~~~~~~~~~C~C~~G~~~~~---~C~~--------C~~- 94 (162)
T 1uzk_A 41 CVDTRSGNCYLD--------------IRPRGDNGDTACSNEIGVGVSKASCCCSLGKAWGT---PCEM--------CPA- 94 (162)
T ss_dssp EECCCCEEEEEE--------------C----------CEEEEEEEECHHHHHTTTCCEETT---TTEE--------CCC-
T ss_pred ccCCCCCcccCC--------------CcccCCCCCCcccCCcCCcccCceeeCCCCCCcCC---Cccc--------CCC-
Confidence 333333 3211 1223 34678988776 79999999998 44 3431 211
Q ss_pred CeeecCCCCeeeeCCC--CCccCCCCCCCCCCCCCCCCCCCCCCCEEecCCCCCccCCCCccCcccCCCCcccCCCcCCC
Q psy9424 292 ARCDNSRGSYKCLCPL--GLVGDPYGAGCVSASQCTRDDQCPPGAHCVKTDGVPKCKASCQSDEECGLGEKCLQGQCNNP 369 (535)
Q Consensus 292 ~~C~~~~g~~~C~C~~--Gy~g~~c~~~C~~~~~C~~~~~C~~~~~C~~~~g~~~C~~~C~~~~eC~~~~~C~~~~C~~~ 369 (535)
+..++|+|.|++ ||++......|++|++|. ..
T Consensus 95 ----~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~-------------------------------~~----------- 128 (162)
T 1uzk_A 95 ----VNTSEYKILCPGGEGFRPNPITVILEDIDECQ-------------------------------EL----------- 128 (162)
T ss_dssp ----TTSHHHHHHCTTCTTEEECTTTCCEEECCHHH-------------------------------HC-----------
T ss_pred ----CCCCCceeECCCCCCcccCCCCCccCcccccc-------------------------------CC-----------
Confidence 245789999998 999875443344444443 21
Q ss_pred CCCCCCCCCCceeeecCCCeeeeCCCCCcCCC
Q psy9424 370 CERQGACGVNSLCNVLTHRKVCFCPRGFTGDP 401 (535)
Q Consensus 370 C~~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~ 401 (535)
.+.|.+ ++|+++.++|+|.|++||+|..
T Consensus 129 ---~~~C~~-g~C~n~~gsy~C~C~~Gy~g~~ 156 (162)
T 1uzk_A 129 ---PGLCQG-GKCINTFGSFQCRCPTGYYLNE 156 (162)
T ss_dssp ---GGGGBT-SEEEECSSCEEEECCTTCCBCT
T ss_pred ---CCCcCC-CEeEcCCCCEEeeCCCCccCCC
Confidence 234543 5899999999999999999975
No 19
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.47 E-value=1.3e-13 Score=150.27 Aligned_cols=180 Identities=20% Similarity=0.442 Sum_probs=121.9
Q ss_pred CCCCCCCCCCCeeccCCCCce---ecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q psy9424 145 ACEGILCGRNALCTASDHHAT---CSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVEC 221 (535)
Q Consensus 145 ~C~~~~C~~~g~C~~~~~~~~---C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~C 221 (535)
+|...||.++++|.+..|.|. |.|++||+|..|+.... +.+ .
T Consensus 436 ~C~~~pc~n~~~C~~g~G~~~~G~C~C~~Gy~G~~Ce~~~~--------------------~~~-------------~-- 480 (690)
T 3fcs_B 436 ACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEE--------------------DYR-------------P-- 480 (690)
T ss_dssp GGGTTCCTTCTTTTTTSEEEETTEEEECTTCCSSSSCCSCC---------------------------------------
T ss_pred CCcCCCCCCCCcccCCCCeEeCCceEeCCCccCCceeeccC--------------------ccC-------------C--
Confidence 677788988899987777777 99999999999763210 000 0
Q ss_pred CCCCCCCCCCcccCCCcccCCCCCCCCCCCCccccCCCCeeeeCC----CCCccCCCCCCeeCCcCCC---CCCCCCCee
Q psy9424 222 NSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQ----PGYTGDAYFGCHLIDFCAA---KPCGPGARC 294 (535)
Q Consensus 222 ~~~~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~C~----~G~~G~~~~~C~~~~~C~~---~~C~~~~~C 294 (535)
...++|... ....+|.++|+|++ +.|.|. +||+|..++ .++++|.. .+|.++|+|
T Consensus 481 ~~~~~C~~~------------~~~~~Cs~~G~C~~----g~C~C~~~~~~Gy~G~~Ce--~~~~~C~~~~~~~C~~~G~C 542 (690)
T 3fcs_B 481 SQQDECSPR------------EGQPVCSQRGECLC----GQCVCHSSDFGKITGKYCE--CDDFSCVRYKGEMCSGHGQC 542 (690)
T ss_dssp --CCCCSSS------------SSSCGGGGSEEECS----SSEEECCCSSCCCBSTTSC--BCSSCCCBSSSSBGGGSEEE
T ss_pred ccCCcCCCC------------CCCCCCCCCCEEEC----CeeEeecCCCCCeeCCCcC--cccCcCcCCCCCCCCCCCEe
Confidence 001223210 00256888999984 479999 999999443 25678875 479999999
Q ss_pred ecCCCCeeeeCCCCCccCCCCCCCC-CCCCCCCCCCCCCCCEEecCCCCCccCCCCccCcccCCCCcccCCCcCCCCCCC
Q psy9424 295 DNSRGSYKCLCPLGLVGDPYGAGCV-SASQCTRDDQCPPGAHCVKTDGVPKCKASCQSDEECGLGEKCLQGQCNNPCERQ 373 (535)
Q Consensus 295 ~~~~g~~~C~C~~Gy~g~~c~~~C~-~~~~C~~~~~C~~~~~C~~~~g~~~C~~~C~~~~eC~~~~~C~~~~C~~~C~~~ 373 (535)
.. ++|.|++||+|..|+ |. ++++|... +.
T Consensus 543 ~~----g~C~C~~Gy~G~~Ce--C~~~~~~C~~~--------------------------------------------~g 572 (690)
T 3fcs_B 543 SC----GDCLCDSDWTGYYCN--CTTRTDTCMSS--------------------------------------------NG 572 (690)
T ss_dssp ET----TEEEECTTEESSSSC--EECCCTTTBCT--------------------------------------------TS
T ss_pred cC----CeeECcCCCcCCCCc--cCCCCCcccCC--------------------------------------------CC
Confidence 87 699999999999876 31 23333210 01
Q ss_pred CCCCCCceeeecCCCeeeeC-CCCCcCCCCCCCCc--cCCCCCCcccCCCCCccCCCCCCCCCcCCCCCCCCCCcCCC
Q psy9424 374 GACGVNSLCNVLTHRKVCFC-PRGFTGDPETECVR--ITCLSHADCYPGGGSLCLANLCTRGCSADTDCPAALSCRSA 448 (535)
Q Consensus 374 ~~C~~~~~C~~~~g~~~C~C-~~G~~g~~~~~C~~--~~C~~~~~C~~~~g~~C~~g~C~~g~~~~~~C~~g~~C~~~ 448 (535)
..|.++++|++ .+|.| ++||+|..|+.|.. .+|.++++|+. |..+| +|..|...
T Consensus 573 ~~C~~~G~C~~----g~C~C~~~Gy~G~~Ce~C~~C~~~C~~~g~Cv~----------C~~g~-------tG~~C~~~ 629 (690)
T 3fcs_B 573 LLCSGRGKCEC----GSCVCIQPGSYGDTCEKCPTCPDACTFKKECVE----------CKKFD-------RGALHDEN 629 (690)
T ss_dssp SBTSSSCEEET----TEEECCSTTCBSTTSCBCTTSCCTTTSCCGGGT----------TTTTC-------CSSSSSSS
T ss_pred CCCCCCCEEeC----CEEECCCCCccCCCcCcCCCCCCCCCCCCCccc----------CCCCC-------ccCCCCcc
Confidence 24555667754 28999 99999999876533 57999998875 55555 66666643
No 20
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.39 E-value=6.4e-13 Score=144.78 Aligned_cols=165 Identities=22% Similarity=0.562 Sum_probs=122.0
Q ss_pred CCCCCCCCccccCCCCee---eeCCCCCccCCCCCCee-------CCcCCC----CCCCCCCeeecCCCCeeeeCC----
Q psy9424 245 NNPCGPNALCSAEKHKQI---CYCQPGYTGDAYFGCHL-------IDFCAA----KPCGPGARCDNSRGSYKCLCP---- 306 (535)
Q Consensus 245 ~~~C~~~~~C~~~~g~~~---C~C~~G~~G~~~~~C~~-------~~~C~~----~~C~~~~~C~~~~g~~~C~C~---- 306 (535)
..+|.++++|.+..|+|. |.|.+||+|..++ +.. .++|.. .+|.++|+|+. +.|.|+
T Consensus 439 ~~pc~n~~~C~~g~G~~~~G~C~C~~Gy~G~~Ce-~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~----g~C~C~~~~~ 513 (690)
T 3fcs_B 439 AQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCE-CSEEDYRPSQQDECSPREGQPVCSQRGECLC----GQCVCHSSDF 513 (690)
T ss_dssp TTCCTTCTTTTTTSEEEETTEEEECTTCCSSSSC-CSCC------CCCCSSSSSSCGGGGSEEECS----SSEEECCCSS
T ss_pred CCCCCCCCcccCCCCeEeCCceEeCCCccCCcee-eccCccCCccCCcCCCCCCCCCCCCCCEEEC----CeeEeecCCC
Confidence 367888889987778887 9999999999553 211 156865 34999999984 589999
Q ss_pred CCCccCCCCCCCCCCCCCCCCCCCCCCCEEecCCCCCccCCCCccCcccCCCCcccCCCcCCCCCCCCCCCCCceeeecC
Q psy9424 307 LGLVGDPYGAGCVSASQCTRDDQCPPGAHCVKTDGVPKCKASCQSDEECGLGEKCLQGQCNNPCERQGACGVNSLCNVLT 386 (535)
Q Consensus 307 ~Gy~g~~c~~~C~~~~~C~~~~~C~~~~~C~~~~g~~~C~~~C~~~~eC~~~~~C~~~~C~~~C~~~~~C~~~~~C~~~~ 386 (535)
+||+|..|+. ++++|... ....|.++++|++
T Consensus 514 ~Gy~G~~Ce~---~~~~C~~~--------------------------------------------~~~~C~~~G~C~~-- 544 (690)
T 3fcs_B 514 GKITGKYCEC---DDFSCVRY--------------------------------------------KGEMCSGHGQCSC-- 544 (690)
T ss_dssp CCCBSTTSCB---CSSCCCBS--------------------------------------------SSSBGGGSEEEET--
T ss_pred CCeeCCCcCc---ccCcCcCC--------------------------------------------CCCCCCCCCEecC--
Confidence 9999998762 23333210 0124555677765
Q ss_pred CCeeeeCCCCCcCCCCC------CCCc---cCCCCCCcccCCCCCccCCCCC-CCCCcCCCCCCCCCCcCCCCCcCCCCC
Q psy9424 387 HRKVCFCPRGFTGDPET------ECVR---ITCLSHADCYPGGGSLCLANLC-TRGCSADTDCPAALSCRSAECVDPCSP 456 (535)
Q Consensus 387 g~~~C~C~~G~~g~~~~------~C~~---~~C~~~~~C~~~~g~~C~~g~C-~~g~~~~~~C~~g~~C~~~~c~d~C~~ 456 (535)
++|.|++||+|..|+ .|.. .+|.++|+|+.+ .|. | .+|| .|..|+. -..| +
T Consensus 545 --g~C~C~~Gy~G~~CeC~~~~~~C~~~~g~~C~~~G~C~~g---~C~---C~~~Gy-------~G~~Ce~---C~~C-~ 605 (690)
T 3fcs_B 545 --GDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECG---SCV---CIQPGS-------YGDTCEK---CPTC-P 605 (690)
T ss_dssp --TEEEECTTEESSSSCEECCCTTTBCTTSSBTSSSCEEETT---EEE---CCSTTC-------BSTTSCB---CTTS-C
T ss_pred --CeeECcCCCcCCCCccCCCCCcccCCCCCCCCCCCEEeCC---EEE---CCCCCc-------cCCCcCc---CCCC-C
Confidence 699999999999875 5654 479999999764 787 8 7888 6888875 2445 6
Q ss_pred CCCCCCCeeeeCCCCceeeCCCCCcCCCCCCCcc
Q psy9424 457 APCGPNAQCSVANHRPLCSCPAGLMGLPSANTAC 490 (535)
Q Consensus 457 ~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~~~~C 490 (535)
.+|.++++|++ |..||+|..|....|
T Consensus 606 ~~C~~~g~Cv~--------C~~g~tG~~C~~~~C 631 (690)
T 3fcs_B 606 DACTFKKECVE--------CKKFDRGALHDENTC 631 (690)
T ss_dssp CTTTSCCGGGT--------TTTTCCSSSSSSSCS
T ss_pred CCCCCCCCccc--------CCCCCccCCCCcccc
Confidence 88999999985 999999998765555
No 21
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=99.39 E-value=4.3e-14 Score=120.49 Aligned_cols=109 Identities=26% Similarity=0.563 Sum_probs=84.4
Q ss_pred ccCCCCCCCCCCCCeeccC-CCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q psy9424 142 CRPACEGILCGRNALCTAS-DHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVE 220 (535)
Q Consensus 142 c~~~C~~~~C~~~g~C~~~-~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~ 220 (535)
+||+|+.+||.+ +|+++ .++|+|+|++||+|...+ ...
T Consensus 3 dideC~~~pC~~--~C~~~~~g~y~C~C~~Gy~g~~~~---------------------------------------~~~ 41 (118)
T 1dx5_I 3 PVDPCFRANCEY--QCQPLDQTSYLCVCAEGFAPIPHE---------------------------------------PHR 41 (118)
T ss_dssp CCCGGGGCCCSS--EEEECSSSCEEEECCTTEEEETTE---------------------------------------EEE
T ss_pred ccccCCCCCCCC--CCCCCCCCCEEeECCCCccccCCC---------------------------------------CCc
Confidence 488998899973 99999 899999999999988621 112
Q ss_pred CCCCCCCCCCCcccCCCcccCCCCCCCCCCCCccccCCCCeeeeCCCCCccCCCCCCeeCCcCCC-CCCCCCCeeecCCC
Q psy9424 221 CNSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAA-KPCGPGARCDNSRG 299 (535)
Q Consensus 221 C~~~~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~~~~C~~~~~C~~-~~C~~~~~C~~~~g 299 (535)
|.+ .|. ..+|. ++|++ .++|+|.|++||++.....|+++++|+. ++| +++|+++.+
T Consensus 42 C~~--~C~----------------~~~C~--~~C~~-~~~y~C~C~~Gy~~~~g~~C~dideC~~~~~C--~~~C~n~~g 98 (118)
T 1dx5_I 42 CQM--FCN----------------QTACP--ADCDP-NTQASCECPEGYILDDGFICTDIDECENGGFC--SGVCHNLPG 98 (118)
T ss_dssp EEE--CCC----------------SSEEE--CEECT-TSTTCEECCTTEEEETTTEEEECCHHHHCSSC--SSEEEECSS
T ss_pred ccc--ccC----------------CCCCC--CcccC-CCCeEeECCCCccCCCCCccccccccCCCCCC--cCeEEeCCC
Confidence 221 121 24454 57887 5889999999999432227889999987 889 689999999
Q ss_pred CeeeeCCCCCccCCC
Q psy9424 300 SYKCLCPLGLVGDPY 314 (535)
Q Consensus 300 ~~~C~C~~Gy~g~~c 314 (535)
+|+|.|++||+|...
T Consensus 99 ~y~C~C~~G~~g~~~ 113 (118)
T 1dx5_I 99 TFECICGPDSALAGQ 113 (118)
T ss_dssp SEEEEECSSSSCEEE
T ss_pred CEEEECCCCCccCCC
Confidence 999999999998653
No 22
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=99.33 E-value=5e-14 Score=125.10 Aligned_cols=127 Identities=31% Similarity=0.592 Sum_probs=82.7
Q ss_pred ccCCCCCCCCCCCCeeccCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q psy9424 142 CRPACEGILCGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVEC 221 (535)
Q Consensus 142 c~~~C~~~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~C 221 (535)
+||+|+.+||. +++|+++.++|+|+|++||+|..+. ..|
T Consensus 3 dideC~~~pC~-ng~C~n~~g~y~C~C~~G~~g~~~~----------------------------------------~~C 41 (147)
T 2w86_A 3 DIDECESSPCI-NGVCKNSPGSFICECSSESTLDPTK----------------------------------------TIC 41 (147)
T ss_dssp CCCGGGGCCSB-TSEEEEETTEEEEECCTTEEECTTS----------------------------------------SBE
T ss_pred cCccCcCCCCC-CCEeECCCCCEEeECCCCcccCCCC----------------------------------------Cee
Confidence 48899989997 5799999999999999999988632 111
Q ss_pred CCCC--CCCCCCcccCCCcccCCCCCCCCCCCCccccCCC----------CeeeeCCCCCc---cCCCCCCeeCCcCCCC
Q psy9424 222 NSHA--DCSGDKVCEDHRCKISCLANNPCGPNALCSAEKH----------KQICYCQPGYT---GDAYFGCHLIDFCAAK 286 (535)
Q Consensus 222 ~~~~--~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g----------~~~C~C~~G~~---G~~~~~C~~~~~C~~~ 286 (535)
.+.. .|... -.+..|.+. ...|...+.|.+..+ .|.|.|++||+ |. .|++|++|+..
T Consensus 42 ~~~~~~~C~~~--~~g~~C~~~---~~~c~~~~~C~~~~g~~~g~~C~~c~~~C~C~~Gy~~~~g~---~C~dideC~~~ 113 (147)
T 2w86_A 42 IETIKGTCWQT--VIDGRCEIN---INGATLKSQCCSSLGAAWGSPCTLCQVDPICGKGYSRIKGT---QCEDIDECEVF 113 (147)
T ss_dssp EECCCEEEEEE--EETTEEEEE---EEEEECHHHHHTTTCSEETTTTEECCCCTTTCTTEEEEETT---EEEECCHHHHS
T ss_pred cCCCCCcccCC--CCCCccccC---CCccccCCccccCcCcccCCCcccCCCcccCCCccccCCCC---ccCccccccCC
Confidence 1110 00000 000011000 011111122322222 26789999996 55 78899999754
Q ss_pred --CCCCCCeeecCCCCeeeeCCCCCccCCCCCCC
Q psy9424 287 --PCGPGARCDNSRGSYKCLCPLGLVGDPYGAGC 318 (535)
Q Consensus 287 --~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C 318 (535)
+|.+ ++|+++.++|+|.|++||+|....++|
T Consensus 114 ~~~C~~-g~C~n~~g~y~C~C~~Gy~g~~~~~~C 146 (147)
T 2w86_A 114 PGVCKN-GLCVNTRGSFKCQCPSGMTLDATGRIC 146 (147)
T ss_dssp TTCSSS-SEEEEETTEEEEECCTTCCBCTTSSCB
T ss_pred CCCCCC-CEEECCCCCEEeeCCCCCccCCCCCee
Confidence 4985 599999999999999999998766544
No 23
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=99.19 E-value=5e-13 Score=118.63 Aligned_cols=42 Identities=36% Similarity=0.676 Sum_probs=35.7
Q ss_pred eeCCcCCCCCCCCCCeeecCCCCeeeeCCCCCccCCCCCCCCC
Q psy9424 278 HLIDFCAAKPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVS 320 (535)
Q Consensus 278 ~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C~~ 320 (535)
++|++|+++||.+ ++|++++++|+|.|++||+|..+.+.|++
T Consensus 2 ~dideC~~~pC~n-g~C~n~~g~y~C~C~~G~~g~~~~~~C~~ 43 (147)
T 2w86_A 2 ADIDECESSPCIN-GVCKNSPGSFICECSSESTLDPTKTICIE 43 (147)
T ss_dssp CCCCGGGGCCSBT-SEEEEETTEEEEECCTTEEECTTSSBEEE
T ss_pred CcCccCcCCCCCC-CEeECCCCCEEeECCCCcccCCCCCeecC
Confidence 3689999999985 69999999999999999999877655554
No 24
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.17 E-value=3e-11 Score=125.31 Aligned_cols=163 Identities=21% Similarity=0.463 Sum_probs=103.9
Q ss_pred CccCCCCCCCcccCcCCcCCCCCCCCCCCCCCeeeecCCCceeeCCCCCcCCCCCCCCCCCCCCCCCCCCCCCccccCcc
Q psy9424 14 HLQQVPGLASAACVDGRCRNPCEADEVCGRNAECAVVNHTPRCTCVAGTVGDPKYQSGVGTSCTSSRDCIGEQQCISGLC 93 (535)
Q Consensus 14 ~c~c~~g~~g~~C~~~~~~d~C~~~~~C~~~g~C~~~~~~~~C~C~~Gf~G~~c~~C~~~~~C~~~~~C~~~~~C~~~~c 93 (535)
.|+|.+||.|..|+. .|. +|.++|+|++ ++|+|+|++||+|..|+. .|..+
T Consensus 186 ~c~C~~g~~G~~C~~-----~C~---~C~~~G~C~~--~~g~C~C~~G~~G~~Ce~-----------------~C~~g-- 236 (423)
T 2gy5_A 186 VRRCEAQKWGPECNH-----LCT---ACMNNGVCHE--DTGECICPPGFMGRTCEK-----------------ACELH-- 236 (423)
T ss_dssp ECSSCTTEESTTSCE-----ECC---CCCTTCEECT--TTCCEECCTTEESTTSCE-----------------ECCTT--
T ss_pred CCcCCCCCCCCCCCC-----CCC---CCCCCCEEEC--CCCcEeCCCCccCCCccc-----------------ccCCC--
Confidence 488999999999985 463 7999999987 468999999999995531 01110
Q ss_pred CCCCCCCCCCCCCCCccCCCCCCCCccccCCCCCCCCccCCCCCCCCcccCCCCC-CCCCCCCeeccCCCCceecCCCCC
Q psy9424 94 QPTCRSNTTCPAQHYCNSGLCVLEMQCTTHDQCSATEQCRSNDMGQMQCRPACEG-ILCGRNALCTASDHHATCSCKPGY 172 (535)
Q Consensus 94 ~~~C~~~~~C~~~~~c~~~~C~~g~~C~~~~~c~~~~~C~~~~~G~~~c~~~C~~-~~C~~~g~C~~~~~~~~C~C~~Gf 172 (535)
|+|.. |.++|.. .+|.+++.|. .+.|.|.|++||
T Consensus 237 ------------------------------------------~~g~~-C~~~C~~~~~C~~~g~C~--~~~~~C~C~~G~ 271 (423)
T 2gy5_A 237 ------------------------------------------TFGRT-CKERCSGQEGCKSYVFCL--PDPYGCSCATGW 271 (423)
T ss_dssp ------------------------------------------EESTT-SCEECCSTTTTTTCCEEE--TTTTEEECCBTC
T ss_pred ------------------------------------------CCCCC-cCccCCCCCCCCCCCEEC--CCCCeEEeCCCc
Confidence 11110 1123332 4577788885 457899999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCCCCcccCCCcccCCCCCCCCCCCC
Q psy9424 173 VGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECNSHADCSGDKVCEDHRCKISCLANNPCGPNA 252 (535)
Q Consensus 173 ~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~C~~~~~C~~~~~C~~~~c~~~c~~~~~C~~~~ 252 (535)
+|..|+. .|.++|+|. . |.. .-+|.+++
T Consensus 272 ~G~~C~~------------------~C~~G~~G~--------~-----C~~---------------------~C~C~ngg 299 (423)
T 2gy5_A 272 KGLQCNE------------------ACHPGFYGP--------D-----CKL---------------------RCSCNNGE 299 (423)
T ss_dssp BSGGGCB------------------CCCTTBCSB--------T-----TCC---------------------BCCCTTCC
T ss_pred ccccccC------------------ccCCCCcCC--------c-----ccc---------------------cccCCCCC
Confidence 9999752 366777761 1 211 12577888
Q ss_pred ccccCCCCeeeeCCCCCccCCCCCCeeCCcCCCCCCCCCCeeecCCCCeeeeCCCCCccCCCC
Q psy9424 253 LCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAAKPCGPGARCDNSRGSYKCLCPLGLVGDPYG 315 (535)
Q Consensus 253 ~C~~~~g~~~C~C~~G~~G~~~~~C~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~ 315 (535)
+|.+.. .|.|++||+|. .|+....-...+ .... ..-.+.|.+||.|..++
T Consensus 300 ~C~~~~---~C~C~~G~~G~---~Ce~~~~~~~~~-----~~~~--~~~~~~c~~g~~g~~C~ 349 (423)
T 2gy5_A 300 MCDRFQ---GCLCSPGWQGL---QCEREGIPRMTP-----KIVD--LPDHIEVNSGKFNPICK 349 (423)
T ss_dssp EEETTT---EEECCTTCBST---TSCBCSSCCCCC-----EECS--CCSBCCEESEEECCEEE
T ss_pred EecCCC---ceECCCCCcCC---CCccCccCCcCc-----ceec--CCCeEEeCCCccCCccc
Confidence 998764 39999999999 454321111111 1111 12247888899886543
No 25
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=99.16 E-value=7.3e-12 Score=106.56 Aligned_cols=96 Identities=26% Similarity=0.603 Sum_probs=76.8
Q ss_pred CCCCCCceeeec-CCCeeeeCCCCCcCCCC--CCCCccCCCCC---CcccCCCCCccCCCCCCCCCcCCCCCCCCCCcCC
Q psy9424 374 GACGVNSLCNVL-THRKVCFCPRGFTGDPE--TECVRITCLSH---ADCYPGGGSLCLANLCTRGCSADTDCPAALSCRS 447 (535)
Q Consensus 374 ~~C~~~~~C~~~-~g~~~C~C~~G~~g~~~--~~C~~~~C~~~---~~C~~~~g~~C~~g~C~~g~~~~~~C~~g~~C~~ 447 (535)
.+|.+ +|+++ .++|+|.|++||+|... ++|.. +|.++ ++|++..+|.|. |++||... .|..|++
T Consensus 10 ~pC~~--~C~~~~~g~y~C~C~~Gy~g~~~~~~~C~~-~C~~~~C~~~C~~~~~y~C~---C~~Gy~~~----~g~~C~d 79 (118)
T 1dx5_I 10 ANCEY--QCQPLDQTSYLCVCAEGFAPIPHEPHRCQM-FCNQTACPADCDPNTQASCE---CPEGYILD----DGFICTD 79 (118)
T ss_dssp CCCSS--EEEECSSSCEEEECCTTEEEETTEEEEEEE-CCCSSEEECEECTTSTTCEE---CCTTEEEE----TTTEEEE
T ss_pred CCCCC--CCCCCCCCCEEeECCCCccccCCCCCcccc-ccCCCCCCCcccCCCCeEeE---CCCCccCC----CCCcccc
Confidence 35652 89999 89999999999999853 34543 24333 788886568998 99999543 2788987
Q ss_pred CCCcCCCCC-CCCCCCCeeeeCCCCceeeCCCCCcCCC
Q psy9424 448 AECVDPCSP-APCGPNAQCSVANHRPLCSCPAGLMGLP 484 (535)
Q Consensus 448 ~~c~d~C~~-~~C~~~~~C~~~~g~~~C~C~~G~~G~~ 484 (535)
||+|+. ++| +++|+++.++|+|+|++||+|..
T Consensus 80 ---ideC~~~~~C--~~~C~n~~g~y~C~C~~G~~g~~ 112 (118)
T 1dx5_I 80 ---IDECENGGFC--SGVCHNLPGTFECICGPDSALAG 112 (118)
T ss_dssp ---CCHHHHCSSC--SSEEEECSSSEEEEECSSSSCEE
T ss_pred ---ccccCCCCCC--cCeEEeCCCCEEEECCCCCccCC
Confidence 999985 899 78999999999999999999865
No 26
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=99.13 E-value=6.6e-11 Score=93.63 Aligned_cols=64 Identities=31% Similarity=0.794 Sum_probs=56.7
Q ss_pred CCCCCCCccccCCCCeeeeCCCCCc--cCCCCCCeeCCcCC-CCCCCCCCeeecCCCCeeeeCCCCCccCCC
Q psy9424 246 NPCGPNALCSAEKHKQICYCQPGYT--GDAYFGCHLIDFCA-AKPCGPGARCDNSRGSYKCLCPLGLVGDPY 314 (535)
Q Consensus 246 ~~C~~~~~C~~~~g~~~C~C~~G~~--G~~~~~C~~~~~C~-~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c 314 (535)
.+|.+ ++|+++.++|+|.|++||+ |. .|+++++|. .++|.+ ++|+++.++|+|.|++||+|...
T Consensus 12 ~~C~~-g~C~n~~g~y~C~C~~Gy~~~g~---~C~dideC~~~~~C~~-~~C~n~~g~y~C~C~~G~~g~~~ 78 (82)
T 1emn_A 12 DVCKH-GQCINTDGSYRCECPFGYILAGN---ECVDTDECSVGNPCGN-GTCKNVIGGFECTCEEGFEPGPM 78 (82)
T ss_dssp TSCSS-SEECCCSSCCCEECCTTEEEETT---EEEECCGGGTCCTTSS-SCEEECSSSEEECCSSSSCCCSS
T ss_pred CCcCC-CEEEecCCCEEEECCCCeECCCC---ccCCcccccCCCCCCC-CEeECCCCCEEeECCCCeEeCCC
Confidence 67874 8999999999999999998 55 689999997 678976 69999999999999999998764
No 27
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.08 E-value=9.8e-11 Score=94.55 Aligned_cols=57 Identities=25% Similarity=0.746 Sum_probs=49.9
Q ss_pred cccCCCCeeeeCCCCCccCCCCCCe--eCCcCCCCCCCCCCeeecCC--CCeeeeCCCCCccCCCC
Q psy9424 254 CSAEKHKQICYCQPGYTGDAYFGCH--LIDFCAAKPCGPGARCDNSR--GSYKCLCPLGLVGDPYG 315 (535)
Q Consensus 254 C~~~~g~~~C~C~~G~~G~~~~~C~--~~~~C~~~~C~~~~~C~~~~--g~~~C~C~~Gy~g~~c~ 315 (535)
|++..++|+|.|++||+ .|+ ++++|.++||.++++|++.. ++|+|.|++||+|..|+
T Consensus 25 C~n~~~~y~C~C~~G~~-----~C~~~~~~~C~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce 85 (91)
T 1tpg_A 25 VLRSNRVEYCWCNSGRA-----QCHSVPVKSCSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCE 85 (91)
T ss_dssp CSSSSCEEEEECSSSCC-----BCCEECEEECSSCCSCTTCEEEEESSSSCEEEECCTTCBSSSCC
T ss_pred cccCCCCcEeECCCCCc-----ccccCcCCcccCCCCCCCCEeecCCCCCCeEeECCCCCcCCcCC
Confidence 44557889999999997 465 68999999999999999887 89999999999998876
No 28
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=99.04 E-value=1.3e-10 Score=92.95 Aligned_cols=72 Identities=35% Similarity=0.791 Sum_probs=58.4
Q ss_pred CCCCCCCCccccCCCCeeeeCCCCCccCC--CCCCeeCCcCCCCC--CCCCCeeecCCCCeeeeCCCCCccCCCCCCC
Q psy9424 245 NNPCGPNALCSAEKHKQICYCQPGYTGDA--YFGCHLIDFCAAKP--CGPGARCDNSRGSYKCLCPLGLVGDPYGAGC 318 (535)
Q Consensus 245 ~~~C~~~~~C~~~~g~~~C~C~~G~~G~~--~~~C~~~~~C~~~~--C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C 318 (535)
+.+|.+ ++|+++.++|+|.|++||++.. ...|++|++|+..+ |. +++|+++.++|+|.|++||++....++|
T Consensus 10 ~~~C~~-g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~-~~~C~n~~g~y~C~C~~G~~~~~~~~~C 85 (86)
T 1lmj_A 10 PDLCGR-GQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCR-GGVCHNTEGSYRCECPPGHQLSPNISAC 85 (86)
T ss_dssp SSTTTT-SCEEEETTEEEECCCSSEEECTTTSSSEEECCHHHHCSSTTT-TSEEEEETTEEEEESCTTSCCCSSSCCC
T ss_pred CCCCCC-CEEECCCCCEEeeCCCCcCccCCCCCccCCcccccCCCCcCC-CCEeEcCCCCEEEECcCCcccCCCCCcc
Confidence 356864 5999999999999999998431 22799999998766 65 5799999999999999999987655433
No 29
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.04 E-value=8.4e-10 Score=114.41 Aligned_cols=137 Identities=25% Similarity=0.633 Sum_probs=92.7
Q ss_pred CeeeeCCCCCccCCCCCCeeCCcCCCCCCCCCCeeecCCCCeeeeCCCCCccCCCCCCCCCCCCCCCCCCCCCCCEEecC
Q psy9424 260 KQICYCQPGYTGDAYFGCHLIDFCAAKPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVSASQCTRDDQCPPGAHCVKT 339 (535)
Q Consensus 260 ~~~C~C~~G~~G~~~~~C~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C~~~~~C~~~~~C~~~~~C~~~ 339 (535)
.+.|.|.+||.|+ .|+. .| .+|.++++|.+ +.++|.|++||+|..|+..|.. ..
T Consensus 184 ~~~c~C~~g~~G~---~C~~--~C--~~C~~~G~C~~--~~g~C~C~~G~~G~~Ce~~C~~---g~-------------- 237 (423)
T 2gy5_A 184 LIVRRCEAQKWGP---ECNH--LC--TACMNNGVCHE--DTGECICPPGFMGRTCEKACEL---HT-------------- 237 (423)
T ss_dssp EEECSSCTTEEST---TSCE--EC--CCCCTTCEECT--TTCCEECCTTEESTTSCEECCT---TE--------------
T ss_pred ccCCcCCCCCCCC---CCCC--CC--CCCCCCCEEEC--CCCcEeCCCCccCCCcccccCC---CC--------------
Confidence 4568999999998 5553 45 38999999987 4679999999999987632211 00
Q ss_pred CCCCccCCCCccCcccCCCCcccCCCcCCCCCCCCCCCCCceeeecCCCeeeeCCCCCcCCCCCCCCccCCCCCCcccCC
Q psy9424 340 DGVPKCKASCQSDEECGLGEKCLQGQCNNPCERQGACGVNSLCNVLTHRKVCFCPRGFTGDPETECVRITCLSHADCYPG 419 (535)
Q Consensus 340 ~g~~~C~~~C~~~~eC~~~~~C~~~~C~~~C~~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~C~~~~C~~~~~C~~~ 419 (535)
.+.. |.++|...+.|.++++|. .++|+|.|++||+|..++.
T Consensus 238 -----------------~g~~-----C~~~C~~~~~C~~~g~C~--~~~~~C~C~~G~~G~~C~~--------------- 278 (423)
T 2gy5_A 238 -----------------FGRT-----CKERCSGQEGCKSYVFCL--PDPYGCSCATGWKGLQCNE--------------- 278 (423)
T ss_dssp -----------------ESTT-----SCEECCSTTTTTTCCEEE--TTTTEEECCBTCBSGGGCB---------------
T ss_pred -----------------CCCC-----cCccCCCCCCCCCCCEEC--CCCCeEEeCCCcccccccC---------------
Confidence 0000 112233345677777885 5678999999999987432
Q ss_pred CCCccCCCCCCCCCcCCCCCCCCCCcCCCCCcCCCCCCCCCCCCeeeeCCCCceeeCCCCCcCCCCCC
Q psy9424 420 GGSLCLANLCTRGCSADTDCPAALSCRSAECVDPCSPAPCGPNAQCSVANHRPLCSCPAGLMGLPSAN 487 (535)
Q Consensus 420 ~g~~C~~g~C~~g~~~~~~C~~g~~C~~~~c~d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~~ 487 (535)
. |.+|| .|..|+. ..+|.++++|.+.. .|.|++||+|..|+.
T Consensus 279 ---~-----C~~G~-------~G~~C~~--------~C~C~ngg~C~~~~---~C~C~~G~~G~~Ce~ 320 (423)
T 2gy5_A 279 ---A-----CHPGF-------YGPDCKL--------RCSCNNGEMCDRFQ---GCLCSPGWQGLQCER 320 (423)
T ss_dssp ---C-----CCTTB-------CSBTTCC--------BCCCTTCCEEETTT---EEECCTTCBSTTSCB
T ss_pred ---c-----cCCCC-------cCCcccc--------cccCCCCCEecCCC---ceECCCCCcCCCCcc
Confidence 0 55555 4555543 22688888898664 399999999988873
No 30
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.01 E-value=1.7e-10 Score=93.10 Aligned_cols=80 Identities=24% Similarity=0.442 Sum_probs=63.4
Q ss_pred CeeeeCCCCCcCCCC--CCCCccCCCCCCcccCCCCCccCCCCCCCCCcCCCCCCCCCCcC-CCCCcCCCCCCCCCCCCe
Q psy9424 388 RKVCFCPRGFTGDPE--TECVRITCLSHADCYPGGGSLCLANLCTRGCSADTDCPAALSCR-SAECVDPCSPAPCGPNAQ 464 (535)
Q Consensus 388 ~~~C~C~~G~~g~~~--~~C~~~~C~~~~~C~~~~g~~C~~g~C~~g~~~~~~C~~g~~C~-~~~c~d~C~~~~C~~~~~ 464 (535)
+|+|.|++||+|..+ ++|...||.++ ..++.|. |++|| . .|+ .. +++|.++||.++|+
T Consensus 1 sy~C~C~~g~~g~~c~~~~c~~~pC~n~-----~~~y~C~---C~~G~-------~--~C~~~~--~~~C~~~pC~ngg~ 61 (91)
T 1tpg_A 1 SYQVICRDEKTQMIYQQHQSWLRPVLRS-----NRVEYCW---CNSGR-------A--QCHSVP--VKSCSEPRCFNGGT 61 (91)
T ss_dssp CCCCCCBCSSSCCBCCSSCEEEEECSSS-----SCEEEEE---CSSSC-------C--BCCEEC--EEECSSCCSCTTCE
T ss_pred CeeeECCCCCcCCeECCCcccCCccccC-----CCCcEeE---CCCCC-------c--ccccCc--CCcccCCCCCCCCE
Confidence 589999999999865 34544455543 1247888 88888 3 675 22 89999999999999
Q ss_pred eeeCC--CCceeeCCCCCcCCCCC
Q psy9424 465 CSVAN--HRPLCSCPAGLMGLPSA 486 (535)
Q Consensus 465 C~~~~--g~~~C~C~~G~~G~~c~ 486 (535)
|++.. ++|+|.|++||+|..|+
T Consensus 62 C~~~~~~~~~~C~C~~G~~G~~Ce 85 (91)
T 1tpg_A 62 CQQALYFSDFVCQCPEGFAGKSCE 85 (91)
T ss_dssp EEEESSSSCEEEECCTTCBSSSCC
T ss_pred eecCCCCCCeEeECCCCCcCCcCC
Confidence 99987 89999999999999886
No 31
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=98.99 E-value=2.8e-10 Score=123.74 Aligned_cols=161 Identities=25% Similarity=0.555 Sum_probs=98.4
Q ss_pred CCCCCCCCeeeecCCCceeeCCCCCcCCCCCCCCCCCCCCCCCCCCCCCccccCccCCCCCCCCCCCCCCCccCCCCCCC
Q psy9424 38 DEVCGRNAECAVVNHTPRCTCVAGTVGDPKYQSGVGTSCTSSRDCIGEQQCISGLCQPTCRSNTTCPAQHYCNSGLCVLE 117 (535)
Q Consensus 38 ~~~C~~~g~C~~~~~~~~C~C~~Gf~G~~c~~C~~~~~C~~~~~C~~~~~C~~~~c~~~C~~~~~C~~~~~c~~~~C~~g 117 (535)
..+|.++|+|+ .+.|.|++||+|..|+ |..... ........ |. ... ...+|..+
T Consensus 434 s~~Cs~~G~C~----~g~C~C~~Gy~G~~Ce-c~~~~~---------~~~~~~~~----C~------~~~--~~~~Cs~~ 487 (687)
T 3k6s_B 434 RSLCHGKGFLE----CGICRCDTGYIGKNCE-CQTQGR---------SSQELEGS----CR------KDN--NSIICSGL 487 (687)
T ss_dssp SSTGGGSEEES----SSSEEECSSEESTTSC-EESSSC---------CCSGGGST----TS------SST--TSCGGGSS
T ss_pred CCCCCCCCEEe----CCEeEcCCCCcCCccc-ccCCcC---------CccccCCC----CC------CCC--CCCcCCCC
Confidence 56898899998 3589999999999654 111000 00000001 11 000 00122223
Q ss_pred CccccCCCCCCCCccC------CCCCCCCcc--cCCCCC---CCCCC--CCeeccCCCCceecCCCCCCCCCCCCCCCCC
Q psy9424 118 MQCTTHDQCSATEQCR------SNDMGQMQC--RPACEG---ILCGR--NALCTASDHHATCSCKPGYVGHPGPSMGTGP 184 (535)
Q Consensus 118 ~~C~~~~~c~~~~~C~------~~~~G~~~c--~~~C~~---~~C~~--~g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~ 184 (535)
.+|.. ..+.|. ++|+|..+. ++.|.. .+|.+ +|+|+. ..|.|++||+|..|+...
T Consensus 488 G~C~~-----G~C~C~~~~~~~~G~~G~~Ce~~~~~C~~~~~~~C~~~~~G~C~~----g~C~C~~G~~G~~Cec~~--- 555 (687)
T 3k6s_B 488 GDCVC-----GQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFC----GKCRCHPGFEGSACQCER--- 555 (687)
T ss_dssp EEEET-----TEEEECCCCSTTCCEESTTSCEESSCSCEETTEETSHHHHEEEET----TEEEECTTCCSTTSCSCC---
T ss_pred CEEeC-----CEEEcCCCCCCCCCccccccccccccccCCCCcCcCCCCCCeEEC----CEEEcCCCCcCCCCccCC---
Confidence 33331 134677 889999865 678863 46988 899986 389999999999975110
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCCCCcccCCCcccCCCCCCCCCCCCccccCCCCeeee
Q psy9424 185 SSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECNSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICY 264 (535)
Q Consensus 185 ~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~C~~~~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~ 264 (535)
+.+.|... ...+|.++|+|+. .+|.
T Consensus 556 --------------------------------------~~~~C~~~-------------~g~~Cs~~G~C~~----g~C~ 580 (687)
T 3k6s_B 556 --------------------------------------TTEGCLNP-------------RRVECSGRGRCRC----NVCE 580 (687)
T ss_dssp --------------------------------------SSCTTBCT-------------TCSBTSSSCCBCS----SCBC
T ss_pred --------------------------------------CCCCCCCC-------------CCCCCCCCCcCCC----CEEE
Confidence 11222210 0246888889976 3699
Q ss_pred CCCCCccCCCCCCeeCCcCCCCCCCCCCeee
Q psy9424 265 CQPGYTGDAYFGCHLIDFCAAKPCGPGARCD 295 (535)
Q Consensus 265 C~~G~~G~~~~~C~~~~~C~~~~C~~~~~C~ 295 (535)
|.+||+|.. |+.-..| +.+|.+++.|+
T Consensus 581 C~~Gy~G~~---Ce~c~~C-~~~C~~~g~Cv 607 (687)
T 3k6s_B 581 CHSGYQLPL---CQECPGC-PSPCGKYISCA 607 (687)
T ss_dssp CSTTCCTTT---TCCCTTS-CCCCTTTHHHH
T ss_pred CCCCCcCCC---CCCCCCC-CcccCCCCCCC
Confidence 999999994 5433456 46898888887
No 32
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=98.96 E-value=4.4e-10 Score=88.84 Aligned_cols=73 Identities=27% Similarity=0.645 Sum_probs=58.7
Q ss_pred ccCCCCC-CCCCCCCeeccCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q psy9424 142 CRPACEG-ILCGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVE 220 (535)
Q Consensus 142 c~~~C~~-~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~ 220 (535)
++|+|+. ++|. +++|+++.++|+|.|++||++.. ..
T Consensus 4 dideC~~~~~C~-~g~C~n~~g~y~C~C~~Gy~~~g------------------------------------------~~ 40 (82)
T 1emn_A 4 DMDECKEPDVCK-HGQCINTDGSYRCECPFGYILAG------------------------------------------NE 40 (82)
T ss_dssp CCCSSSSTTSCS-SSEECCCSSCCCEECCTTEEEET------------------------------------------TE
T ss_pred ccccCCCCCCcC-CCEEEecCCCEEEECCCCeECCC------------------------------------------Cc
Confidence 3788985 8897 58999999999999999998533 22
Q ss_pred CCCCCCCCCCCcccCCCcccCCCCCCCCCCCCccccCCCCeeeeCCCCCccCC
Q psy9424 221 CNSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGDA 273 (535)
Q Consensus 221 C~~~~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~ 273 (535)
|.++++|.. ..+|.+ ++|+++.++|+|.|++||+|..
T Consensus 41 C~dideC~~---------------~~~C~~-~~C~n~~g~y~C~C~~G~~g~~ 77 (82)
T 1emn_A 41 CVDTDECSV---------------GNPCGN-GTCKNVIGGFECTCEEGFEPGP 77 (82)
T ss_dssp EEECCGGGT---------------CCTTSS-SCEEECSSSEEECCSSSSCCCS
T ss_pred cCCcccccC---------------CCCCCC-CEeECCCCCEEeECCCCeEeCC
Confidence 556676642 367875 6999999999999999999874
No 33
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=98.95 E-value=5.2e-10 Score=98.69 Aligned_cols=83 Identities=28% Similarity=0.651 Sum_probs=64.5
Q ss_pred cCCCCCCCCCCCcccCCCcccCCCCCCCCCCCCccccCCCCeeeeCCCCCccCCCCCCeeCCcCCCC--CCCCCCee-ec
Q psy9424 220 ECNSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAAK--PCGPGARC-DN 296 (535)
Q Consensus 220 ~C~~~~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~~~~C~~~~~C~~~--~C~~~~~C-~~ 296 (535)
.|.++++|. +.+|.++++|+++.++|+|.|++||+|. .|+++++|... +|.+ +| ++
T Consensus 44 ~c~dideC~----------------~~pC~n~g~C~~~~~~y~C~C~~G~~G~---~C~~~deC~~~~~~C~~--~C~~n 102 (146)
T 1x7a_L 44 QYVDGDQCE----------------PNPCLNGGLCKDDINSYECWCQVGFEGK---NCELDATCNIKNGRCKQ--FCKTG 102 (146)
T ss_dssp ------CCS----------------SCSSCTTCEEEECSSCEEEECCSSEEST---TTCEECCTTSGGGSCSS--BCCCC
T ss_pred cCCCcCcCC----------------CCCCCCCCEeECCCCCEEEecCCCCcCC---cCCCCccccCCCCCCcC--CCCCC
Confidence 466777775 4789999999999999999999999998 78888999764 4654 99 99
Q ss_pred CCCCeeeeCCCCCccCCCCCCCCCCCC
Q psy9424 297 SRGSYKCLCPLGLVGDPYGAGCVSASQ 323 (535)
Q Consensus 297 ~~g~~~C~C~~Gy~g~~c~~~C~~~~~ 323 (535)
+.++|+|.|++||++....+.|.++++
T Consensus 103 ~~g~y~C~C~~Gy~l~~dG~~C~~~~~ 129 (146)
T 1x7a_L 103 ADSKVLCSCTTGYRLAPDQKSCKPAVP 129 (146)
T ss_dssp SSSCCCCBCCTTEEECTTSSSEEECSS
T ss_pred CCCCEEeEcCCCcEeCCCCCcCCCCCC
Confidence 999999999999996655555665544
No 34
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=98.93 E-value=9.6e-10 Score=119.50 Aligned_cols=158 Identities=27% Similarity=0.652 Sum_probs=104.1
Q ss_pred CCCCCCCCccccCCCCeeeeCCCCCccCCCCCCeeCC---------cCCCC----CCCCCCeeecCCCCeeeeCC-----
Q psy9424 245 NNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLID---------FCAAK----PCGPGARCDNSRGSYKCLCP----- 306 (535)
Q Consensus 245 ~~~C~~~~~C~~~~g~~~C~C~~G~~G~~~~~C~~~~---------~C~~~----~C~~~~~C~~~~g~~~C~C~----- 306 (535)
+.+|.++|+|.. ..|.|.+||+|..++ | +++ .|... +|.++|+|+.. +|.|+
T Consensus 434 s~~Cs~~G~C~~----g~C~C~~Gy~G~~Ce-c-~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~G----~C~C~~~~~~ 503 (687)
T 3k6s_B 434 RSLCHGKGFLEC----GICRCDTGYIGKNCE-C-QTQGRSSQELEGSCRKDNNSIICSGLGDCVCG----QCLCHTSDVP 503 (687)
T ss_dssp SSTGGGSEEESS----SSEEECSSEESTTSC-E-ESSSCCCSGGGSTTSSSTTSCGGGSSEEEETT----EEEECCCCST
T ss_pred CCCCCCCCEEeC----CEeEcCCCCcCCccc-c-cCCcCCccccCCCCCCCCCCCcCCCCCEEeCC----EEEcCCCCCC
Confidence 567888888873 369999999999554 2 222 47543 49999999843 89999
Q ss_pred -CCCccCCCCCCCCCCCCCCCCCCCCCCCEEecCCCCCccCCCCccCcccCCCCcccCCCcCCCCCCCCCCCC--Cceee
Q psy9424 307 -LGLVGDPYGAGCVSASQCTRDDQCPPGAHCVKTDGVPKCKASCQSDEECGLGEKCLQGQCNNPCERQGACGV--NSLCN 383 (535)
Q Consensus 307 -~Gy~g~~c~~~C~~~~~C~~~~~C~~~~~C~~~~g~~~C~~~C~~~~eC~~~~~C~~~~C~~~C~~~~~C~~--~~~C~ 383 (535)
+||+|..|+. +...|... +...|.+ +++|.
T Consensus 504 ~~G~~G~~Ce~---~~~~C~~~--------------------------------------------~~~~C~~~~~G~C~ 536 (687)
T 3k6s_B 504 GKLIYGQYCEC---DTINCERY--------------------------------------------NGQVCGGPGRGLCF 536 (687)
T ss_dssp TCCEESTTSCE---ESSCSCEE--------------------------------------------TTEETSHHHHEEEE
T ss_pred CCCcccccccc---ccccccCC--------------------------------------------CCcCcCCCCCCeEE
Confidence 9999998762 22333210 0123444 55665
Q ss_pred ecCCCeeeeCCCCCcCCCCC------CCCcc---CCCCCCcccCCCCCccCCCCCCCCCcCCCCCCCCCCcCCCCCcCCC
Q psy9424 384 VLTHRKVCFCPRGFTGDPET------ECVRI---TCLSHADCYPGGGSLCLANLCTRGCSADTDCPAALSCRSAECVDPC 454 (535)
Q Consensus 384 ~~~g~~~C~C~~G~~g~~~~------~C~~~---~C~~~~~C~~~~g~~C~~g~C~~g~~~~~~C~~g~~C~~~~c~d~C 454 (535)
. + +|.|++||+|..|+ .|... +|.++|+|+.+ .|. |.+|| .|..|+. -..|
T Consensus 537 ~--g--~C~C~~G~~G~~Cec~~~~~~C~~~~g~~Cs~~G~C~~g---~C~---C~~Gy-------~G~~Ce~---c~~C 596 (687)
T 3k6s_B 537 C--G--KCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRCN---VCE---CHSGY-------QLPLCQE---CPGC 596 (687)
T ss_dssp T--T--EEEECTTCCSTTSCSCCSSCTTBCTTCSBTSSSCCBCSS---CBC---CSTTC-------CTTTTCC---CTTS
T ss_pred C--C--EEEcCCCCcCCCCccCCCCCCCCCCCCCCCCCCCcCCCC---EEE---CCCCC-------cCCCCCC---CCCC
Confidence 3 2 79999999998875 45443 68888888763 576 77777 6777775 2345
Q ss_pred CCCCCCCCCeeeeCCCCceeeC-CCCCcCCCCC
Q psy9424 455 SPAPCGPNAQCSVANHRPLCSC-PAGLMGLPSA 486 (535)
Q Consensus 455 ~~~~C~~~~~C~~~~g~~~C~C-~~G~~G~~c~ 486 (535)
+.+|.+++.|+ .|.+ ..|..+..|+
T Consensus 597 -~~~C~~~g~Cv------~C~~~~~G~~~~~C~ 622 (687)
T 3k6s_B 597 -PSPCGKYISCA------ECLKFEKGPFGKNCS 622 (687)
T ss_dssp -CCCCTTTHHHH------TTTTSCSCCCSSCSS
T ss_pred -CcccCCCCCCC------cccCCCCCCCCcccc
Confidence 56788888887 4544 2344444443
No 35
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=98.93 E-value=6.6e-10 Score=88.91 Aligned_cols=64 Identities=30% Similarity=0.630 Sum_probs=52.1
Q ss_pred CCCCCCCccccCCCCeeeeCCCCCccCC-CCCCeeCCcCCCCCCCCCCeeecCCCCeeeeCC--CCCccC
Q psy9424 246 NPCGPNALCSAEKHKQICYCQPGYTGDA-YFGCHLIDFCAAKPCGPGARCDNSRGSYKCLCP--LGLVGD 312 (535)
Q Consensus 246 ~~C~~~~~C~~~~g~~~C~C~~G~~G~~-~~~C~~~~~C~~~~C~~~~~C~~~~g~~~C~C~--~Gy~g~ 312 (535)
.+| ++++|+++.++|+|.|++||++.. ...|+++++|...+|. ++|++++++|+|.|+ +||...
T Consensus 11 ~~C-~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~dideC~~~~C~--~~C~n~~g~y~C~C~g~~G~~~~ 77 (87)
T 1z6c_A 11 SIC-GTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECSENMCA--QLCVNYPGGYTCYCDGKKGFKLA 77 (87)
T ss_dssp SSB-TTSSCCCBTTBCCCSSSTTCEEETTTTEEECCCHHHHSCCS--SEECCCSSSCCEECCSSSCCBCC
T ss_pred CCC-CCCEeECCCCCEEEECCCCceECCCCCcCCCcCeeCCCCCC--CEEEccCCCEEEECCCCcCCccc
Confidence 348 678999999999999999999431 1268899999888996 699999999999995 555443
No 36
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.92 E-value=8.7e-10 Score=93.03 Aligned_cols=86 Identities=20% Similarity=0.328 Sum_probs=62.9
Q ss_pred CCCCCCCccccCCCCeeeeCCCCCccCCCCCCeeC---CcCCCCCCCCCCeeecCCCCeeeeCCCCCccCCCCCCCCCCC
Q psy9424 246 NPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLI---DFCAAKPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVSAS 322 (535)
Q Consensus 246 ~~C~~~~~C~~~~g~~~C~C~~G~~G~~~~~C~~~---~~C~~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C~~~~ 322 (535)
..|.++++|+++.++|+|.|++||+|. .|+++ ++|...+..-..+|+++.++|+|.|++||+|....+.|+++.
T Consensus 20 ~~C~~~g~C~~~~~~y~C~C~~G~~G~---~C~~~~~~~~C~~~~~~C~~~C~n~~g~y~C~C~~G~~~~~~g~~C~~~~ 96 (114)
T 1aut_L 20 SLCCGHGTCIDGIGSFSCDCRSGWEGR---FCQREVSFLNCSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHPAV 96 (114)
T ss_dssp STTTTSEEECCCSSCCCEEECTTEEST---TSCEECCSSSSSSGGGGCSSEEEECSSSEEEECCTTEEECTTSSCEEECS
T ss_pred ccCCCcCCCCCCCCCcEeeCCCCCcCC---CcCcCCcCCcCcCCCCCCCCEeECCCCCEEeECCCCeeECCCCCccCcCc
Confidence 348889999999999999999999999 56653 467653221123999999999999999999988777776542
Q ss_pred CCCCCCCCCCCCEEec
Q psy9424 323 QCTRDDQCPPGAHCVK 338 (535)
Q Consensus 323 ~C~~~~~C~~~~~C~~ 338 (535)
+ .+|.+.+.++.
T Consensus 97 ~----~pC~~~~~~i~ 108 (114)
T 1aut_L 97 K----FPCGRPWKRME 108 (114)
T ss_dssp S----SCTTCCC----
T ss_pred c----cCCCCCCccCC
Confidence 2 36666666654
No 37
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=98.92 E-value=9.4e-10 Score=117.94 Aligned_cols=63 Identities=25% Similarity=0.559 Sum_probs=13.3
Q ss_pred eeeeCCCCCcCCCCCCCCccCCCCCCcccCCCCCccCCCCCCCCCcCCCCCCCCCCcCCCCCcCCCCCCCCCCCCeeeeC
Q psy9424 389 KVCFCPRGFTGDPETECVRITCLSHADCYPGGGSLCLANLCTRGCSADTDCPAALSCRSAECVDPCSPAPCGPNAQCSVA 468 (535)
Q Consensus 389 ~~C~C~~G~~g~~~~~C~~~~C~~~~~C~~~~g~~C~~g~C~~g~~~~~~C~~g~~C~~~~c~d~C~~~~C~~~~~C~~~ 468 (535)
++|.|++||+|..+++| .+||. +.. .+ ++.|.+.+|.+++.+...
T Consensus 460 g~C~C~~g~~G~~Ce~C------------------------~~G~~-------g~~-~~---~~~C~~C~C~~~gs~~~~ 504 (525)
T 4aqs_A 460 GYCYCKRLVTGQRCDQC------------------------LPQHW-------GLS-ND---LDGCRPCDCDLGGALNNS 504 (525)
T ss_dssp CCBCBCTTCCSTTTCC----------------------------------------------------------------
T ss_pred CEEECCCCCcCCCcccC------------------------CCCcc-------CCC-CC---CCCCcCCCCCCCCccCCc
Confidence 47999999999986533 33441 111 11 567777788888776543
Q ss_pred --CCCceeeCCCCCcCCCCC
Q psy9424 469 --NHRPLCSCPAGLMGLPSA 486 (535)
Q Consensus 469 --~g~~~C~C~~G~~G~~c~ 486 (535)
...++|.|++||+|..|+
T Consensus 505 C~~~tG~C~C~~G~~G~~Ce 524 (525)
T 4aqs_A 505 CSEDSGQCSCLPHMIGRQCN 524 (525)
T ss_dssp --------------------
T ss_pred cCCCCCeeECCCCCcCCCCC
Confidence 234589999999999875
No 38
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=98.91 E-value=8e-10 Score=97.48 Aligned_cols=83 Identities=24% Similarity=0.504 Sum_probs=60.7
Q ss_pred CcccCCCCCCCCCCCCeeccCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q psy9424 140 MQCRPACEGILCGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRV 219 (535)
Q Consensus 140 ~~c~~~C~~~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~ 219 (535)
..++|+|+++||.++++|+++.++|+|.|++||+|..|+
T Consensus 45 c~dideC~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~----------------------------------------- 83 (146)
T 1x7a_L 45 YVDGDQCEPNPCLNGGLCKDDINSYECWCQVGFEGKNCE----------------------------------------- 83 (146)
T ss_dssp -----CCSSCSSCTTCEEEECSSCEEEECCSSEESTTTC-----------------------------------------
T ss_pred CCCcCcCCCCCCCCCCEeECCCCCEEEecCCCCcCCcCC-----------------------------------------
Confidence 345899999999999999999999999999999998843
Q ss_pred cCCCCCCCCCCCcccCCCcccCCCCCCCCCCCCcc-ccCCCCeeeeCCCCCccCC-CCCCeeCCc
Q psy9424 220 ECNSHADCSGDKVCEDHRCKISCLANNPCGPNALC-SAEKHKQICYCQPGYTGDA-YFGCHLIDF 282 (535)
Q Consensus 220 ~C~~~~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C-~~~~g~~~C~C~~G~~G~~-~~~C~~~~~ 282 (535)
++++|... +.+|.+ +| +++.++|+|.|++||++.. ...|+++++
T Consensus 84 ---~~deC~~~--------------~~~C~~--~C~~n~~g~y~C~C~~Gy~l~~dG~~C~~~~~ 129 (146)
T 1x7a_L 84 ---LDATCNIK--------------NGRCKQ--FCKTGADSKVLCSCTTGYRLAPDQKSCKPAVP 129 (146)
T ss_dssp ---EECCTTSG--------------GGSCSS--BCCCCSSSCCCCBCCTTEEECTTSSSEEECSS
T ss_pred ---CCccccCC--------------CCCCcC--CCCCCCCCCEEeEcCCCcEeCCCCCcCCCCCC
Confidence 23455421 245765 89 8999999999999999321 116777654
No 39
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=98.91 E-value=5.5e-10 Score=89.18 Aligned_cols=68 Identities=24% Similarity=0.546 Sum_probs=53.8
Q ss_pred CCCCCCceeeecCCCeeeeCCCCCcCCCCCCCCccCCCCCCcccCCCCCccCCCCCCCCCcCCCCCCCCCCcCCCCCcCC
Q psy9424 374 GACGVNSLCNVLTHRKVCFCPRGFTGDPETECVRITCLSHADCYPGGGSLCLANLCTRGCSADTDCPAALSCRSAECVDP 453 (535)
Q Consensus 374 ~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~C~~~~C~~~~~C~~~~g~~C~~g~C~~g~~~~~~C~~g~~C~~~~c~d~ 453 (535)
..|.+ ++|+++.++|+|.|++||++... .+..|++ ||+
T Consensus 11 ~~C~~-g~C~n~~g~y~C~C~~Gy~~~~~--------------------------------------~g~~C~d---ide 48 (86)
T 1lmj_A 11 DLCGR-GQCVNTPGDFECKCDEGYESGFM--------------------------------------MMKNCMD---IDE 48 (86)
T ss_dssp STTTT-SCEEEETTEEEECCCSSEEECTT--------------------------------------TSSSEEE---CCH
T ss_pred CCCCC-CEEECCCCCEEeeCCCCcCccCC--------------------------------------CCCccCC---ccc
Confidence 35643 58999999999999999987531 2445555 888
Q ss_pred CCCC--CCCCCCeeeeCCCCceeeCCCCCcCCC
Q psy9424 454 CSPA--PCGPNAQCSVANHRPLCSCPAGLMGLP 484 (535)
Q Consensus 454 C~~~--~C~~~~~C~~~~g~~~C~C~~G~~G~~ 484 (535)
|... .|. +++|+++.++|+|.|++||++..
T Consensus 49 C~~~~~~C~-~~~C~n~~g~y~C~C~~G~~~~~ 80 (86)
T 1lmj_A 49 CQRDPLLCR-GGVCHNTEGSYRCECPPGHQLSP 80 (86)
T ss_dssp HHHCSSTTT-TSEEEEETTEEEEESCTTSCCCS
T ss_pred ccCCCCcCC-CCEeEcCCCCEEEECcCCcccCC
Confidence 8744 476 58999999999999999999875
No 40
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=98.89 E-value=6.2e-10 Score=89.09 Aligned_cols=66 Identities=27% Similarity=0.620 Sum_probs=52.5
Q ss_pred CCCCCceeeecCCCeeeeCCCCCcCCCCCCCCccCCCCCCcccCCCCCccCCCCCCCCCcCCCCCCCCCCcCCCCCcCCC
Q psy9424 375 ACGVNSLCNVLTHRKVCFCPRGFTGDPETECVRITCLSHADCYPGGGSLCLANLCTRGCSADTDCPAALSCRSAECVDPC 454 (535)
Q Consensus 375 ~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~C~~~~C~~~~~C~~~~g~~C~~g~C~~g~~~~~~C~~g~~C~~~~c~d~C 454 (535)
.| ++++|+++.++|+|.|++||++.. .+..|++ ||+|
T Consensus 12 ~C-~~~~C~n~~g~y~C~C~~G~~~~~---------------------------------------~g~~C~d---ideC 48 (87)
T 1z6c_A 12 IC-GTAVCKNIPGDFECECPEGYRYNL---------------------------------------KSKSCED---IDEC 48 (87)
T ss_dssp SB-TTSSCCCBTTBCCCSSSTTCEEET---------------------------------------TTTEEEC---CCHH
T ss_pred CC-CCCEeECCCCCEEEECCCCceECC---------------------------------------CCCcCCC---cCee
Confidence 46 677899999999999999998753 2344554 8888
Q ss_pred CCCCCCCCCeeeeCCCCceeeCCCCCcCCCCC
Q psy9424 455 SPAPCGPNAQCSVANHRPLCSCPAGLMGLPSA 486 (535)
Q Consensus 455 ~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~ 486 (535)
..++|. ++|+++.++|+|.|+ ||.|..++
T Consensus 49 ~~~~C~--~~C~n~~g~y~C~C~-g~~G~~~~ 77 (87)
T 1z6c_A 49 SENMCA--QLCVNYPGGYTCYCD-GKKGFKLA 77 (87)
T ss_dssp HHSCCS--SEECCCSSSCCEECC-SSSCCBCC
T ss_pred CCCCCC--CEEEccCCCEEEECC-CCcCCccc
Confidence 878897 799999999999998 77776554
No 41
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.82 E-value=2.6e-09 Score=90.14 Aligned_cols=96 Identities=26% Similarity=0.510 Sum_probs=63.2
Q ss_pred ccCCCCCCC--------CCCCCeeccCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy9424 142 CRPACEGIL--------CGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGP 213 (535)
Q Consensus 142 c~~~C~~~~--------C~~~g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~ 213 (535)
++|+|+..| |.++++|+++.++|+|.|++||+|..|+.
T Consensus 5 d~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~~G~~C~~---------------------------------- 50 (114)
T 1aut_L 5 DGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQR---------------------------------- 50 (114)
T ss_dssp ---CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTTEESTTSCE----------------------------------
T ss_pred ecccccCCCccccccccCCCcCCCCCCCCCcEeeCCCCCcCCCcCc----------------------------------
Confidence 366777777 99999999999999999999999998541
Q ss_pred CccccccCCCCCCCCCCCcccCCCcccCCCCCCCCCCCCccccCCCCeeeeCCCCCccCC-CCCCeeCCcCCCCCCCCCC
Q psy9424 214 VGCHRVECNSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGDA-YFGCHLIDFCAAKPCGPGA 292 (535)
Q Consensus 214 ~~C~~~~C~~~~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~-~~~C~~~~~C~~~~C~~~~ 292 (535)
. .+.++|... ...|.+ +|+++.++|+|.|++||+|.. ...|+++. ..||...+
T Consensus 51 -----~--~~~~~C~~~--------------~~~C~~--~C~n~~g~y~C~C~~G~~~~~~g~~C~~~~---~~pC~~~~ 104 (114)
T 1aut_L 51 -----E--VSFLNCSLD--------------NGGCTH--YCLEEVGWRRCSCAPGYKLGDDLLQCHPAV---KFPCGRPW 104 (114)
T ss_dssp -----E--CCSSSSSSG--------------GGGCSS--EEEECSSSEEEECCTTEEECTTSSCEEECS---SSCTTCCC
T ss_pred -----C--CcCCcCcCC--------------CCCCCC--EeECCCCCEEeECCCCeeECCCCCccCcCc---ccCCCCCC
Confidence 0 001233211 234553 899999999999999999643 12566543 35787777
Q ss_pred eeecC
Q psy9424 293 RCDNS 297 (535)
Q Consensus 293 ~C~~~ 297 (535)
.++..
T Consensus 105 ~~i~~ 109 (114)
T 1aut_L 105 KRMEK 109 (114)
T ss_dssp -----
T ss_pred ccCCC
Confidence 66654
No 42
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.81 E-value=2.4e-09 Score=94.09 Aligned_cols=76 Identities=24% Similarity=0.574 Sum_probs=61.4
Q ss_pred CCCCCCCCccccCCCCeeeeCCCCCccCCCCCCee-CCcCCCCCCCCCC---eeecCCC-CeeeeCCCCCccCCCCCCCC
Q psy9424 245 NNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHL-IDFCAAKPCGPGA---RCDNSRG-SYKCLCPLGLVGDPYGAGCV 319 (535)
Q Consensus 245 ~~~C~~~~~C~~~~g~~~C~C~~G~~G~~~~~C~~-~~~C~~~~C~~~~---~C~~~~g-~~~C~C~~Gy~g~~c~~~C~ 319 (535)
+.+|.++++|+++.++|+|.|++||+|. .|++ ++++...++.+++ +|+++.+ +|+|.|++||++....+.|.
T Consensus 52 ~~pC~n~g~C~~~~g~y~C~C~~G~~G~---~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~dG~~C~ 128 (142)
T 2c4f_L 52 SSPCQNGGSCKDQLQSYICFCLPAFEGR---NCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCT 128 (142)
T ss_dssp GCCCCTTCEEEEETTEEEEECCTTEEST---TSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTEEECTTSSCEE
T ss_pred CCCcCCCCEEeCCCCCEEeeCCCCccCC---ccccCccccccccCCCCCccCEeECCCCCCEEEECCCCceECCCCCCCC
Confidence 4789999999999999999999999999 6765 6776554555555 9999999 99999999999665555565
Q ss_pred CCCC
Q psy9424 320 SASQ 323 (535)
Q Consensus 320 ~~~~ 323 (535)
++++
T Consensus 129 ~~~e 132 (142)
T 2c4f_L 129 PTVE 132 (142)
T ss_dssp ESSS
T ss_pred CCCc
Confidence 5544
No 43
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.78 E-value=1.4e-09 Score=100.12 Aligned_cols=92 Identities=28% Similarity=0.615 Sum_probs=31.3
Q ss_pred CCCCCCcccCCCCCCCCCCCCeeccCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy9424 135 NDMGQMQCRPACEGILCGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPV 214 (535)
Q Consensus 135 ~~~G~~~c~~~C~~~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~ 214 (535)
.|++...++++|+.+||.++|+|+++.++|+|.|++||+|..|+.
T Consensus 34 ~fw~~c~dideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~----------------------------------- 78 (195)
T 1nfu_B 34 EFWNKYKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCEL----------------------------------- 78 (195)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccCCCCcccCCCCCCCCCEeECCCCCeeEeCCCCceeccccc-----------------------------------
Confidence 455566678999999999999999999999999999999988531
Q ss_pred ccccccCCCC-CCCCCCCcccCCCcccCCCCCCCCCCCCccccCCCCeeeeCCCCCc----cCCCCCCeeCCcCCCCCCC
Q psy9424 215 GCHRVECNSH-ADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYT----GDAYFGCHLIDFCAAKPCG 289 (535)
Q Consensus 215 ~C~~~~C~~~-~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~C~~G~~----G~~~~~C~~~~~C~~~~C~ 289 (535)
.+ ++|... +.+|.+ +|+++.++|+|.|++||+ |. .|+++. ..||.
T Consensus 79 --------~i~deC~~~--------------~~~C~~--~C~n~~gsy~C~C~~Gy~l~~dG~---~C~~~~---~~PC~ 128 (195)
T 1nfu_B 79 --------FTRKLCSLD--------------NGDCDQ--FCHEEQNSVVCSCARGYTLADNGK---ACIPTG---PYPCG 128 (195)
T ss_dssp ----------CCGGGTG--------------GGGCSS--EEEEETTEEEEECCTTEEECTTSS---CEEESS---SSCTT
T ss_pred --------cccccccCC--------------CCCCCC--EeECCCCCeEEECCCCceeCCCCC---ccccCC---CCCCC
Confidence 01 334311 245765 899999999999999999 55 677754 35665
Q ss_pred CC
Q psy9424 290 PG 291 (535)
Q Consensus 290 ~~ 291 (535)
+.
T Consensus 129 ~~ 130 (195)
T 1nfu_B 129 KQ 130 (195)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 44
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.76 E-value=1.7e-09 Score=94.94 Aligned_cols=37 Identities=19% Similarity=0.462 Sum_probs=34.0
Q ss_pred ccCCCCCCCCCCCCeeccCCCCceecCCCCCCCCCCC
Q psy9424 142 CRPACEGILCGRNALCTASDHHATCSCKPGYVGHPGP 178 (535)
Q Consensus 142 c~~~C~~~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~ 178 (535)
++++|+++||.++++|+++.++|+|.|++||+|..|+
T Consensus 46 did~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~~C~ 82 (142)
T 2c4f_L 46 DGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCE 82 (142)
T ss_dssp TCCGGGGCCCCTTCEEEEETTEEEEECCTTEESTTSC
T ss_pred ccCcCcCCCcCCCCEEeCCCCCEEeeCCCCccCCccc
Confidence 4889999999999999999999999999999998854
No 45
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=98.73 E-value=2.6e-09 Score=88.79 Aligned_cols=68 Identities=32% Similarity=0.640 Sum_probs=25.5
Q ss_pred CCCCCCCccccCCCCeeeeCCCCCccCCCCCCeeCCcCCC-CCCCCCCeeecCCCCeeeeCCCCCccCCCCCC
Q psy9424 246 NPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAA-KPCGPGARCDNSRGSYKCLCPLGLVGDPYGAG 317 (535)
Q Consensus 246 ~~C~~~~~C~~~~g~~~C~C~~G~~G~~~~~C~~~~~C~~-~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~ 317 (535)
..|. ++|+++.++|+|.|++||+|.....|++|++|.. .+|. ++|+++.++|+|.|++||++....++
T Consensus 37 ~~C~--~~C~n~~g~y~C~C~~Gy~g~~g~~C~dideC~~~~~C~--~~C~n~~gsy~C~C~~Gy~~~~d~~~ 105 (107)
T 2w2n_E 37 GGCS--YVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCS--QLCVNLEGGYKCQCEEGFQLDPHTKA 105 (107)
T ss_dssp GGCS--SEEECCSBSCEEECCTTCEEETTTEEEC---------------------------------------
T ss_pred CCCC--CEeEeCCCCeEEECCCCccccCCCccccccccCCCCCcC--CeeecCCCCEEEECCCCceECCCCCc
Confidence 3454 4899999999999999999843237899999974 6786 69999999999999999998765543
No 46
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.72 E-value=2.3e-09 Score=93.20 Aligned_cols=84 Identities=27% Similarity=0.599 Sum_probs=27.0
Q ss_pred CCCCCcccCCCCCCCCCCCCeeccCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q psy9424 136 DMGQMQCRPACEGILCGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVG 215 (535)
Q Consensus 136 ~~G~~~c~~~C~~~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~ 215 (535)
|++....+++|+.+||.++++|+++.++|+|.|++||+|..|+..
T Consensus 35 ~~~~c~d~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~----------------------------------- 79 (134)
T 2vh0_B 35 FWNKYKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELF----------------------------------- 79 (134)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccCCCcCcCCCCCCCCcCCcccCCCCEEeeCCCCccCCccccC-----------------------------------
Confidence 444445689999999999999999999999999999999885310
Q ss_pred cccccCCCC-CCCCCCCcccCCCcccCCCCCCCCCCCCccccCCCCeeeeCCCCCc----cCCCCCCeeCC
Q psy9424 216 CHRVECNSH-ADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYT----GDAYFGCHLID 281 (535)
Q Consensus 216 C~~~~C~~~-~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~C~~G~~----G~~~~~C~~~~ 281 (535)
+ ++|... +.+|.+ +|+++.++|+|.|++||+ |. .|++++
T Consensus 80 --------i~d~C~~~--------------~~~C~~--~C~~~~g~y~C~C~~Gy~l~~~g~---~C~~~~ 123 (134)
T 2vh0_B 80 --------TRKLCSLD--------------NGDCDQ--FCHEEQNSVVCSCARGYTLADNGK---ACIPTG 123 (134)
T ss_dssp ---------CCGGGTG--------------GGGCSS--EEEEETTEEEEECCTTEEECTTSS---CEEESS
T ss_pred --------CCCccccC--------------CCCCCC--EeECCCCCEEEECCCCcEECCCCC---ccCcCC
Confidence 1 333211 245664 899999999999999999 55 677654
No 47
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=98.70 E-value=5.9e-09 Score=111.70 Aligned_cols=56 Identities=29% Similarity=0.553 Sum_probs=13.4
Q ss_pred CeeeeCCCCCccCCCCCCe--------eCCcCCCCCCCCCCeeecC--CCCeeeeCCCCCccCCCC
Q psy9424 260 KQICYCQPGYTGDAYFGCH--------LIDFCAAKPCGPGARCDNS--RGSYKCLCPLGLVGDPYG 315 (535)
Q Consensus 260 ~~~C~C~~G~~G~~~~~C~--------~~~~C~~~~C~~~~~C~~~--~g~~~C~C~~Gy~g~~c~ 315 (535)
++.|.|++||+|..++.|. +++.|.+.+|.+++.+... ...++|.|++||+|..|+
T Consensus 459 tg~C~C~~g~~G~~Ce~C~~G~~g~~~~~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~G~~G~~Ce 524 (525)
T 4aqs_A 459 TGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQCN 524 (525)
T ss_dssp TCCBCBCTTCCSTTTCC-------------------------------------------------
T ss_pred CCEEECCCCCcCCCcccCCCCccCCCCCCCCCcCCCCCCCCccCCccCCCCCeeECCCCCcCCCCC
Confidence 3469999999999665443 2466777778877766543 234579999999998765
No 48
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.68 E-value=3e-09 Score=92.38 Aligned_cols=72 Identities=25% Similarity=0.714 Sum_probs=29.6
Q ss_pred CCCCCCCCccccCCCCeeeeCCCCCccCCCCCCee-C-CcCCCC--CCCCCCeeecCCCCeeeeCCCCCccCCCCCCCCC
Q psy9424 245 NNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHL-I-DFCAAK--PCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVS 320 (535)
Q Consensus 245 ~~~C~~~~~C~~~~g~~~C~C~~G~~G~~~~~C~~-~-~~C~~~--~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C~~ 320 (535)
+.+|.++++|+++.++|+|.|++||+|. .|++ + ++|... +|.+ +|++..++|+|.|++||++....+.|.+
T Consensus 47 ~~pC~n~g~C~~~~~~y~C~C~~G~~G~---~C~~~i~d~C~~~~~~C~~--~C~~~~g~y~C~C~~Gy~l~~~g~~C~~ 121 (134)
T 2vh0_B 47 TSPCQNQGKCKDGLGEYTCTCLEGFEGK---NCELFTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGYTLADNGKACIP 121 (134)
T ss_dssp -------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred CCCCCCcCCcccCCCCEEeeCCCCccCC---ccccCCCCccccCCCCCCC--EeECCCCCEEEECCCCcEECCCCCccCc
Confidence 4789999999999999999999999998 6776 6 889763 4654 9999999999999999996554444544
Q ss_pred C
Q psy9424 321 A 321 (535)
Q Consensus 321 ~ 321 (535)
+
T Consensus 122 ~ 122 (134)
T 2vh0_B 122 T 122 (134)
T ss_dssp S
T ss_pred C
Confidence 3
No 49
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.63 E-value=5.3e-09 Score=96.20 Aligned_cols=81 Identities=23% Similarity=0.688 Sum_probs=29.8
Q ss_pred cCCCCCCCCCCCcccCCCcccCCCCCCCCCCCCccccCCCCeeeeCCCCCccCCCCCCee-C-CcCCCC--CCCCCCeee
Q psy9424 220 ECNSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHL-I-DFCAAK--PCGPGARCD 295 (535)
Q Consensus 220 ~C~~~~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~~~~C~~-~-~~C~~~--~C~~~~~C~ 295 (535)
.|.++++|. +.+|.++|+|++..++|+|.|++||+|. .|++ + ++|... +|.+ +|+
T Consensus 38 ~c~dideC~----------------~~pC~ngg~C~n~~g~y~C~C~~Gf~G~---~Ce~~i~deC~~~~~~C~~--~C~ 96 (195)
T 1nfu_B 38 KYKDGDQCE----------------TSPCQNQGKCKDGLGEYTCTCLEGFEGK---NCELFTRKLCSLDNGDCDQ--FCH 96 (195)
T ss_dssp --------------------------------------------------------------CCGGGTGGGGCSS--EEE
T ss_pred cCCCCcccC----------------CCCCCCCCEeECCCCCeeEeCCCCceec---cccccccccccCCCCCCCC--EeE
Confidence 466777775 4789999999999999999999999998 6766 5 889764 5654 999
Q ss_pred cCCCCeeeeCCCCCccCCCCCCCCCC
Q psy9424 296 NSRGSYKCLCPLGLVGDPYGAGCVSA 321 (535)
Q Consensus 296 ~~~g~~~C~C~~Gy~g~~c~~~C~~~ 321 (535)
+..++|+|.|++||++....+.|.++
T Consensus 97 n~~gsy~C~C~~Gy~l~~dG~~C~~~ 122 (195)
T 1nfu_B 97 EEQNSVVCSCARGYTLADNGKACIPT 122 (195)
T ss_dssp EETTEEEEECCTTEEECTTSSCEEES
T ss_pred CCCCCeEEECCCCceeCCCCCccccC
Confidence 99999999999999955444445544
No 50
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.62 E-value=3.8e-08 Score=98.48 Aligned_cols=76 Identities=30% Similarity=0.692 Sum_probs=67.4
Q ss_pred CCCCCCCCccccCCCCeeeeCCCCCccCCCCCCe-eCCcCCC---CCCCCCCeeecCCCCeeeeCCCCCccCCCCCCCCC
Q psy9424 245 NNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCH-LIDFCAA---KPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVS 320 (535)
Q Consensus 245 ~~~C~~~~~C~~~~g~~~C~C~~G~~G~~~~~C~-~~~~C~~---~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C~~ 320 (535)
+.+|.++++|++..++|+|.|++||+|. .|+ ++++|.. .+|.+ +|++..++|+|.|++||++....+.|.+
T Consensus 10 ~~pC~~~g~C~~~~~~~~C~C~~g~~g~---~C~~~~~eC~~~~~~~C~~--~C~~~~g~~~C~C~~g~~~~~~~~~C~~ 84 (317)
T 3h5c_B 10 SQPCLHNGSCQDSIWGYTCTCSPGYEGS---NCELAKNECHPERTDGCQH--FCLPGQESYTCSCAQGYRLGEDHKQCVP 84 (317)
T ss_dssp SCCCTTTCCCCCCSSSCCCCCSSSCCSS---SSCCCSSSCCTTCTTSCSS--EEECCSSSCEEECCTTEECCTTSSCCEE
T ss_pred CCCCCCCCEeECCCCCeEEECCCCCcCC---ccccCcccCCCCCCCCCcC--ccccCCCeeEEecccccccccccccccc
Confidence 4789999999999999999999999999 676 8999986 68976 9999999999999999999887777887
Q ss_pred CCCCC
Q psy9424 321 ASQCT 325 (535)
Q Consensus 321 ~~~C~ 325 (535)
+++|.
T Consensus 85 ~~~c~ 89 (317)
T 3h5c_B 85 HDQCA 89 (317)
T ss_dssp CSSCC
T ss_pred ccccc
Confidence 77763
No 51
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=98.59 E-value=1e-08 Score=85.27 Aligned_cols=80 Identities=19% Similarity=0.452 Sum_probs=36.0
Q ss_pred CCCCCCCCcccCCCCC--CCCCCCCeeccCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy9424 133 RSNDMGQMQCRPACEG--ILCGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHS 210 (535)
Q Consensus 133 ~~~~~G~~~c~~~C~~--~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~ 210 (535)
..+|.|..+.+++|.. ..|. ++|+++.++|+|.|++||+|..
T Consensus 19 ~~~~~~~~Cd~neC~~~~~~C~--~~C~n~~g~y~C~C~~Gy~g~~---------------------------------- 62 (107)
T 2w2n_E 19 ENLYFQGAMGTNECLDNNGGCS--YVCNDLKIGYECLCPDGFQLVA---------------------------------- 62 (107)
T ss_dssp -CCCCSCCBSCCGGGTGGGGCS--SEEECCSBSCEEECCTTCEEET----------------------------------
T ss_pred CCCcCCCCCcCccCcCCCCCCC--CEeEeCCCCeEEECCCCccccC----------------------------------
Confidence 4567777777889975 3564 5999999999999999999843
Q ss_pred CCCCccccccCCCCCCCCCCCcccCCCcccCCCCCCCCCCCCccccCCCCeeeeCCCCCccC
Q psy9424 211 GGPVGCHRVECNSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGD 272 (535)
Q Consensus 211 ~~~~~C~~~~C~~~~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~C~~G~~G~ 272 (535)
...|+++++|.. +.+|. ++|+++.++|+|.|++||++.
T Consensus 63 -------g~~C~dideC~~---------------~~~C~--~~C~n~~gsy~C~C~~Gy~~~ 100 (107)
T 2w2n_E 63 -------QRRCEDIDECQD---------------PDTCS--QLCVNLEGGYKCQCEEGFQLD 100 (107)
T ss_dssp -------TTEEEC-------------------------------------------------
T ss_pred -------CCccccccccCC---------------CCCcC--CeeecCCCCEEEECCCCceEC
Confidence 133666777752 25675 599999999999999999976
No 52
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.49 E-value=1.8e-07 Score=93.57 Aligned_cols=84 Identities=26% Similarity=0.591 Sum_probs=65.6
Q ss_pred ccCCCCCCCCCCCCeeccCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q psy9424 142 CRPACEGILCGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVEC 221 (535)
Q Consensus 142 c~~~C~~~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~C 221 (535)
++++|.++||.++++|++..++|+|.|++||+|..|++
T Consensus 4 d~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~~C~~------------------------------------------ 41 (317)
T 3h5c_B 4 GGSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCEL------------------------------------------ 41 (317)
T ss_dssp --CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCSSSSCC------------------------------------------
T ss_pred cCCcCCCCCCCCCCEeECCCCCeEEECCCCCcCCcccc------------------------------------------
Confidence 47899999999999999999999999999999988431
Q ss_pred CCCCCCCCCCcccCCCcccCCCCCCCCCCCCccccCCCCeeeeCCCCCccCC-CCCCeeCCcC
Q psy9424 222 NSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGDA-YFGCHLIDFC 283 (535)
Q Consensus 222 ~~~~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~-~~~C~~~~~C 283 (535)
++++|.... ..+|.+ +|+++.++|+|.|.+||+|.. ...|.++++|
T Consensus 42 -~~~eC~~~~-------------~~~C~~--~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~c 88 (317)
T 3h5c_B 42 -AKNECHPER-------------TDGCQH--FCLPGQESYTCSCAQGYRLGEDHKQCVPHDQC 88 (317)
T ss_dssp -CSSSCCTTC-------------TTSCSS--EEECCSSSCEEECCTTEECCTTSSCCEECSSC
T ss_pred -CcccCCCCC-------------CCCCcC--ccccCCCeeEEecccccccccccccccccccc
Confidence 445664210 267876 899999999999999999853 2367777666
No 53
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.46 E-value=2.4e-06 Score=94.72 Aligned_cols=72 Identities=32% Similarity=0.665 Sum_probs=58.3
Q ss_pred CCCCCCCccccCCCCeeeeCCCCCccCCCCCCeeCCcCC-CCCCCCCCeeecCCCCeeeeCCCCCccCCCCCCCCCC
Q psy9424 246 NPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCA-AKPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVSA 321 (535)
Q Consensus 246 ~~C~~~~~C~~~~g~~~C~C~~G~~G~~~~~C~~~~~C~-~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C~~~ 321 (535)
..|. .+|+++.++|+|.|++||++....+|+++++|+ ..+|. ++|+++.++|+|.|++||++....++|..+
T Consensus 302 ~~C~--~~C~~~~~~~~C~C~~G~~~~~~~~C~dideC~~~~~C~--~~C~n~~g~y~C~C~~G~~~~~~~~~C~~~ 374 (699)
T 1n7d_A 302 GGCS--HVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCS--QLCVNLEGGYKCQCEEGFQLDPHTKACKAV 374 (699)
T ss_dssp TTSC--TTCCCCTTCCCCCCCSSSCCCSSSCCCCCCCCSSSSSCT--TTCCBCSSCBCCCCCSSCBCCSSCCCCBCC
T ss_pred cCcC--CCcccCCCCcEEeCCCCeEcCCCCcccCccccCCCCccc--cccccCCCCeeeeeecccccCCCCCccccc
Confidence 4464 479999999999999999964333799999997 46785 489999999999999999987766667644
No 54
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.41 E-value=2.9e-06 Score=93.96 Aligned_cols=79 Identities=20% Similarity=0.538 Sum_probs=57.5
Q ss_pred ccCCCCCC--CCCCCCeeccCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccc
Q psy9424 142 CRPACEGI--LCGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRV 219 (535)
Q Consensus 142 c~~~C~~~--~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~ 219 (535)
.+++|... .|. ++|+++.++|+|.|++||.+.. ..
T Consensus 293 ~~~eC~~~~~~C~--~~C~~~~~~~~C~C~~G~~~~~-----------------------------------------~~ 329 (699)
T 1n7d_A 293 GTNECLDNNGGCS--HVCNDLKIGYECLCPDGFQLVA-----------------------------------------QR 329 (699)
T ss_dssp CCCCTTSSTTTSC--TTCCCCTTCCCCCCCSSSCCCS-----------------------------------------SS
T ss_pred ccccccccccCcC--CCcccCCCCcEEeCCCCeEcCC-----------------------------------------CC
Confidence 36677652 353 5899999999999999999733 13
Q ss_pred cCCCCCCCCCCCcccCCCcccCCCCCCCCCCCCccccCCCCeeeeCCCCCccCCC-CCCeeC
Q psy9424 220 ECNSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGDAY-FGCHLI 280 (535)
Q Consensus 220 ~C~~~~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~~-~~C~~~ 280 (535)
.|+++++|.. +.+|. .+|+++.++|+|.|.+||++..- .+|.++
T Consensus 330 ~C~dideC~~---------------~~~C~--~~C~n~~g~y~C~C~~G~~~~~~~~~C~~~ 374 (699)
T 1n7d_A 330 RCEDIDECQD---------------PDTCS--QLCVNLEGGYKCQCEEGFQLDPHTKACKAV 374 (699)
T ss_dssp CCCCCCCCSS---------------SSSCT--TTCCBCSSCBCCCCCSSCBCCSSCCCCBCC
T ss_pred cccCccccCC---------------CCccc--cccccCCCCeeeeeecccccCCCCCccccc
Confidence 4667787753 35675 38999999999999999997531 245543
No 55
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.38 E-value=1.3e-07 Score=67.80 Aligned_cols=42 Identities=21% Similarity=0.344 Sum_probs=34.4
Q ss_pred CCcCCCCCcCCCCCCCCCCCCeee-----eCCCCceeeCCCCCcCCCCC
Q psy9424 443 LSCRSAECVDPCSPAPCGPNAQCS-----VANHRPLCSCPAGLMGLPSA 486 (535)
Q Consensus 443 ~~C~~~~c~d~C~~~~C~~~~~C~-----~~~g~~~C~C~~G~~G~~c~ 486 (535)
..|+.. +|+|+++||.|+|+|+ +..++|+|.|++||+|..|+
T Consensus 2 ~~c~~~--~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE 48 (55)
T 3u7u_G 2 TSHLVK--CAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQ 48 (55)
T ss_dssp -CCEEE--CCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSC
T ss_pred CCCccc--CCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcC
Confidence 345544 8999999999999994 56689999999999999987
No 56
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.30 E-value=8.4e-07 Score=99.23 Aligned_cols=70 Identities=31% Similarity=0.631 Sum_probs=57.6
Q ss_pred ccccCCCCeeeeCCCCCccCCCCCCeeCCcCCC-CCCCCCCeeecCCCCeeeeCCCCCccCCCCCCCCCCCCC
Q psy9424 253 LCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAA-KPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVSASQC 324 (535)
Q Consensus 253 ~C~~~~g~~~C~C~~G~~G~~~~~C~~~~~C~~-~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C~~~~~C 324 (535)
.|+++.++|+|.|++||.+.....|+++++|.. .+|. .+|+++.++|+|.|++||.+....+.|.+++++
T Consensus 325 ~C~~~~~~y~C~C~~Gy~l~~g~~C~dideC~~~~~C~--~~C~n~~gsy~C~C~~Gy~l~~~~~~C~~~~~~ 395 (791)
T 3m0c_C 325 VCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCS--QLCVNLEGGYKCQCEEGFQLDPHTKACKAVGSI 395 (791)
T ss_dssp EEEECSBSEEEECCTTCEEETTTEEECCCCCSSSSSCT--TTCCBCSSCBCCCCCSSEECCSSCCCCEETTSC
T ss_pred cccCCCCCcccCCCCCCccCCCCccccCcccCCCCCCC--CeeecCCCCceeecCCCCEeCCCCceeeecccc
Confidence 899999999999999997532237999999973 4454 589999999999999999998777778776654
No 57
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.29 E-value=5.5e-07 Score=59.95 Aligned_cols=36 Identities=28% Similarity=0.592 Sum_probs=33.9
Q ss_pred cCCCCCCCCCCCCeeeeCCCCceeeCCCCCcCCCCC
Q psy9424 451 VDPCSPAPCGPNAQCSVANHRPLCSCPAGLMGLPSA 486 (535)
Q Consensus 451 ~d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~ 486 (535)
+|+|.++||.++++|++..++|+|.|++||+|..|+
T Consensus 3 ~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce 38 (39)
T 1edm_B 3 GDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE 38 (39)
T ss_dssp CCTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSC
T ss_pred cccCCCCCCCCCCEeEcCCCceEeECCCCCcCCccC
Confidence 789999999999999999999999999999999875
No 58
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=98.19 E-value=7.2e-07 Score=79.88 Aligned_cols=29 Identities=31% Similarity=0.649 Sum_probs=24.3
Q ss_pred CCCCCCeeeecC--CCcee-eCCCCCcCCCCC
Q psy9424 40 VCGRNAECAVVN--HTPRC-TCVAGTVGDPKY 68 (535)
Q Consensus 40 ~C~~~g~C~~~~--~~~~C-~C~~Gf~G~~c~ 68 (535)
+|.++++|+... +.++| .|++||+|..++
T Consensus 2 ~C~~~g~C~~~~~~g~~~C~~C~~g~~G~~Ce 33 (162)
T 1klo_A 2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCE 33 (162)
T ss_dssp CSCTTCCEEECSSSCCEEECSCCTTEESTTSC
T ss_pred cCcCcCcccccCCCCCEEeCCCCCCCcCCCCc
Confidence 588899998865 57899 799999999665
No 59
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.17 E-value=8.1e-07 Score=63.63 Aligned_cols=43 Identities=19% Similarity=0.268 Sum_probs=33.9
Q ss_pred CcccCcCCcCCCCCCCCCCCCCCee-----eecCCCceeeCCCCCcCCCCC
Q psy9424 23 SAACVDGRCRNPCEADEVCGRNAEC-----AVVNHTPRCTCVAGTVGDPKY 68 (535)
Q Consensus 23 g~~C~~~~~~d~C~~~~~C~~~g~C-----~~~~~~~~C~C~~Gf~G~~c~ 68 (535)
|.+|+.. +|+|. .+||.++|+| ++..++|+|+|++||+|..|+
T Consensus 1 G~~c~~~--~~eC~-s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE 48 (55)
T 3u7u_G 1 GTSHLVK--CAEKE-KTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQ 48 (55)
T ss_dssp --CCEEE--CCSTT-TTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSC
T ss_pred CCCCccc--CCCCc-CCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcC
Confidence 5667765 99998 8999999999 456679999999999999654
No 60
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.16 E-value=2e-06 Score=88.85 Aligned_cols=72 Identities=32% Similarity=0.624 Sum_probs=59.2
Q ss_pred CCCCCccccCCCCeeeeCCCCCccCCCCCCeeCCcCCC-CCCCCCCeeecCCCCeeeeCCCCCccCCCCCCCCCC
Q psy9424 248 CGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAA-KPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVSA 321 (535)
Q Consensus 248 C~~~~~C~~~~g~~~C~C~~G~~G~~~~~C~~~~~C~~-~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C~~~ 321 (535)
+...+.|+++.++|+|.|++||++.....|++++||.. .+|.+ .|+++.++|.|.|.+||++....+.|..+
T Consensus 8 ~~c~~~C~~~~~~y~C~C~~G~~~~~~~~C~dideC~~~~~C~~--~C~n~~g~~~C~C~~g~~~~~~~~~C~~~ 80 (400)
T 3p5b_L 8 GGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQ--LCVNLEGGYKCQCEEGFQLDPHTKACKAV 80 (400)
T ss_dssp GGCSSEEEECSSSEEEECCTTEEECSSSCEEECCCCSTTSSCSS--CCBCCSSSCBCCCCTTCCCCTTTSSCCCS
T ss_pred CCCCCEeECCCCCeEEECCCCCCcCCCCcccCchhhhccCCCCC--ccCCCccceeeeccccccccccccceeec
Confidence 33346999999999999999999533337999999974 67865 89999999999999999998777767654
No 61
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.15 E-value=9.8e-07 Score=82.55 Aligned_cols=107 Identities=21% Similarity=0.429 Sum_probs=72.3
Q ss_pred CCCCCCCeeccCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCC
Q psy9424 149 ILCGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECNSHADCS 228 (535)
Q Consensus 149 ~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~C~~~~~C~ 228 (535)
..|+++|+|+. ..|+|++||+|..|+.... ... ..+....|....
T Consensus 96 ~~Csg~G~C~~----g~C~C~~G~~G~~Cec~~~--------------------~~~--------~~~~~~~C~~~~--- 140 (217)
T 2p28_B 96 SLCHGKGFLEC----GICRCDTGYIGKNCECQTQ--------------------GRS--------SQELEGSCRKDN--- 140 (217)
T ss_dssp CTTTTSEEEET----TEEEECTTEESTTSCEECC--------------------CCC---------GGGGGGGBSST---
T ss_pred CccCCCceEEC----CEEECCCCccCCcccccCc--------------------ccc--------cccCCCcCCCCC---
Confidence 56888999986 4899999999999762100 000 000001122100
Q ss_pred CCCcccCCCcccCCCCCCCCCCCCccccCCCCeeeeCCCC------CccCCCCCCeeCCcCCCC---CCCCC--CeeecC
Q psy9424 229 GDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPG------YTGDAYFGCHLIDFCAAK---PCGPG--ARCDNS 297 (535)
Q Consensus 229 ~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~C~~G------~~G~~~~~C~~~~~C~~~---~C~~~--~~C~~~ 297 (535)
...+|.++|+|+.. .|.|.+| |+|..++ .+++.|... +|.++ |+|...
T Consensus 141 ---------------~~~~Csg~G~C~~g----~C~C~~gw~~~~~~~G~~Ce--~~~~~C~~~~g~~C~~~~~G~C~~g 199 (217)
T 2p28_B 141 ---------------NSIICSGLGDCVCG----QCLCHTSDVPGKLIYGQYCE--CDTINCERYNGQVCGGPGRGLCFCG 199 (217)
T ss_dssp ---------------TSCBGGGTEEEETT----EEEECCCCSTTCCEESTTSC--EESSCSCEETTEETTCTTTEEEETT
T ss_pred ---------------CCCCCCCCCEEeCC----ceECCCCCCCcccEECCCcc--cCCccCCCCCCCCCCCCCCcEEeCC
Confidence 13678889999852 6999999 5898443 245678654 69887 999863
Q ss_pred CCCeeeeCCCCCccCCCC
Q psy9424 298 RGSYKCLCPLGLVGDPYG 315 (535)
Q Consensus 298 ~g~~~C~C~~Gy~g~~c~ 315 (535)
+|.|.+||+|..|+
T Consensus 200 ----~C~C~~G~~G~~C~ 213 (217)
T 2p28_B 200 ----KCRCHPGFEGSACQ 213 (217)
T ss_dssp ----EEEECTTEESTTSC
T ss_pred ----eeECCCCCccCCcC
Confidence 89999999999875
No 62
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.14 E-value=1.5e-06 Score=57.75 Aligned_cols=37 Identities=22% Similarity=0.425 Sum_probs=33.9
Q ss_pred ccCCCCCCCCCCCCeeccCCCCceecCCCCCCCCCCC
Q psy9424 142 CRPACEGILCGRNALCTASDHHATCSCKPGYVGHPGP 178 (535)
Q Consensus 142 c~~~C~~~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~ 178 (535)
++++|.++||.++++|++..++|+|.|++||+|..|+
T Consensus 2 d~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce 38 (39)
T 1edm_B 2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE 38 (39)
T ss_dssp CCCTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSC
T ss_pred ccccCCCCCCCCCCEeEcCCCceEeECCCCCcCCccC
Confidence 3788988999999999999999999999999999875
No 63
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.02 E-value=9.4e-06 Score=90.75 Aligned_cols=71 Identities=20% Similarity=0.533 Sum_probs=53.6
Q ss_pred CeeccCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCCCCCCCCccc
Q psy9424 155 ALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECNSHADCSGDKVCE 234 (535)
Q Consensus 155 g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~C~~~~~C~~~~~C~ 234 (535)
..|+++.++|+|.|++||.+.. ...|.++++|..
T Consensus 324 ~~C~~~~~~y~C~C~~Gy~l~~-----------------------------------------g~~C~dideC~~----- 357 (791)
T 3m0c_C 324 HVCNDLKIGYECLCPDGFQLVA-----------------------------------------QRRCEDIDECQD----- 357 (791)
T ss_dssp SEEEECSBSEEEECCTTCEEET-----------------------------------------TTEEECCCCCSS-----
T ss_pred ccccCCCCCcccCCCCCCccCC-----------------------------------------CCccccCcccCC-----
Confidence 4899999999999999998632 134667788752
Q ss_pred CCCcccCCCCCCCCCCCCccccCCCCeeeeCCCCCccCC-CCCCeeCCcC
Q psy9424 235 DHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGDA-YFGCHLIDFC 283 (535)
Q Consensus 235 ~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~-~~~C~~~~~C 283 (535)
+.+|. .+|+++.++|+|.|.+||.+.. ..+|.++++.
T Consensus 358 ----------~~~C~--~~C~n~~gsy~C~C~~Gy~l~~~~~~C~~~~~~ 395 (791)
T 3m0c_C 358 ----------PDTCS--QLCVNLEGGYKCQCEEGFQLDPHTKACKAVGSI 395 (791)
T ss_dssp ----------SSSCT--TTCCBCSSCBCCCCCSSEECCSSCCCCEETTSC
T ss_pred ----------CCCCC--CeeecCCCCceeecCCCCEeCCCCceeeecccc
Confidence 35675 3899999999999999998743 2257776654
No 64
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=97.99 E-value=2.3e-06 Score=80.08 Aligned_cols=97 Identities=24% Similarity=0.566 Sum_probs=68.2
Q ss_pred CCCCCCCceeeecCCCeeeeCCCCCcCCCCC-------------CCCc----cCCCCCCcccCCCCCccCCCCCCCCCcC
Q psy9424 373 QGACGVNSLCNVLTHRKVCFCPRGFTGDPET-------------ECVR----ITCLSHADCYPGGGSLCLANLCTRGCSA 435 (535)
Q Consensus 373 ~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~-------------~C~~----~~C~~~~~C~~~~g~~C~~g~C~~g~~~ 435 (535)
...|..+++|+. .+|+|++||+|..++ .|.. .+|.++|+|+.+ .|. |.++|..
T Consensus 95 ~~~Csg~G~C~~----g~C~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~g---~C~---C~~gw~~ 164 (217)
T 2p28_B 95 RSLCHGKGFLEC----GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCG---QCL---CHTSDVP 164 (217)
T ss_dssp -CTTTTSEEEET----TEEEECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEETT---EEE---ECCCCST
T ss_pred CCccCCCceEEC----CEEECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeCC---ceE---CCCCCCC
Confidence 346777888874 389999999999873 2542 368888999853 566 6676311
Q ss_pred CCCCCCCCCcCCCCCcCCCCCC---CCCCC--CeeeeCCCCceeeCCCCCcCCCCC
Q psy9424 436 DTDCPAALSCRSAECVDPCSPA---PCGPN--AQCSVANHRPLCSCPAGLMGLPSA 486 (535)
Q Consensus 436 ~~~C~~g~~C~~~~c~d~C~~~---~C~~~--~~C~~~~g~~~C~C~~G~~G~~c~ 486 (535)
... .+|..|+.. ++.|... +|+++ |+|+. .+|.|.+||+|..|+
T Consensus 165 ~~~-~~G~~Ce~~--~~~C~~~~g~~C~~~~~G~C~~----g~C~C~~G~~G~~C~ 213 (217)
T 2p28_B 165 GKL-IYGQYCECD--TINCERYNGQVCGGPGRGLCFC----GKCRCHPGFEGSACQ 213 (217)
T ss_dssp TCC-EESTTSCEE--SSCSCEETTEETTCTTTEEEET----TEEEECTTEESTTSC
T ss_pred ccc-EECCCcccC--CccCCCCCCCCCCCCCCcEEeC----CeeECCCCCccCCcC
Confidence 000 067888743 5667633 79888 99985 299999999999886
No 65
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.96 E-value=3.8e-06 Score=86.75 Aligned_cols=78 Identities=21% Similarity=0.510 Sum_probs=59.3
Q ss_pred CCCCCCCCCCCCeeccCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q psy9424 144 PACEGILCGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECNS 223 (535)
Q Consensus 144 ~~C~~~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~C~~ 223 (535)
|||...++...+.|+++.++|.|.|++||.+.. ...|++
T Consensus 1 ~eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~~~-----------------------------------------~~~C~d 39 (400)
T 3p5b_L 1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVA-----------------------------------------QRRCED 39 (400)
T ss_dssp CCTTTTGGGCSSEEEECSSSEEEECCTTEEECS-----------------------------------------SSCEEE
T ss_pred CcccCCCCCCCCEeECCCCCeEEECCCCCCcCC-----------------------------------------CCcccC
Confidence 467766766678999999999999999998632 134667
Q ss_pred CCCCCCCCcccCCCcccCCCCCCCCCCCCccccCCCCeeeeCCCCCccCCC-CCCee
Q psy9424 224 HADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGDAY-FGCHL 279 (535)
Q Consensus 224 ~~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~~-~~C~~ 279 (535)
+++|.. +.+|.+ .|+++.++|.|.|.+||++... ..|..
T Consensus 40 ideC~~---------------~~~C~~--~C~n~~g~~~C~C~~g~~~~~~~~~C~~ 79 (400)
T 3p5b_L 40 IDECQD---------------PDTCSQ--LCVNLEGGYKCQCEEGFQLDPHTKACKA 79 (400)
T ss_dssp CCCCST---------------TSSCSS--CCBCCSSSCBCCCCTTCCCCTTTSSCCC
T ss_pred chhhhc---------------cCCCCC--ccCCCccceeeeccccccccccccceee
Confidence 788753 367865 8999999999999999997532 24544
No 66
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.90 E-value=9e-06 Score=57.96 Aligned_cols=36 Identities=19% Similarity=0.397 Sum_probs=32.8
Q ss_pred cCCCCCC---CCCCCCeee--eCCCCceeeCCCCCcCCCCC
Q psy9424 451 VDPCSPA---PCGPNAQCS--VANHRPLCSCPAGLMGLPSA 486 (535)
Q Consensus 451 ~d~C~~~---~C~~~~~C~--~~~g~~~C~C~~G~~G~~c~ 486 (535)
|++|.+. ||.++|+|+ +..++|+|.|++||+|..|+
T Consensus 3 i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce 43 (53)
T 1egf_A 3 YPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQ 43 (53)
T ss_dssp ECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSSSSC
T ss_pred cccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCCcCC
Confidence 7888865 999999999 78899999999999999986
No 67
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=97.84 E-value=1.4e-05 Score=71.36 Aligned_cols=29 Identities=21% Similarity=0.548 Sum_probs=24.5
Q ss_pred CCCCCCeeccCC--CCcee-cCCCCCCCCCCC
Q psy9424 150 LCGRNALCTASD--HHATC-SCKPGYVGHPGP 178 (535)
Q Consensus 150 ~C~~~g~C~~~~--~~~~C-~C~~Gf~g~~c~ 178 (535)
||.++++|+... +.++| .|++||+|..|+
T Consensus 2 ~C~~~g~C~~~~~~g~~~C~~C~~g~~G~~Ce 33 (162)
T 1klo_A 2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCE 33 (162)
T ss_dssp CSCTTCCEEECSSSCCEEECSCCTTEESTTSC
T ss_pred cCcCcCcccccCCCCCEEeCCCCCCCcCCCCc
Confidence 577889998765 56899 799999999986
No 68
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.81 E-value=4.2e-06 Score=85.97 Aligned_cols=69 Identities=29% Similarity=0.738 Sum_probs=21.7
Q ss_pred CCCCCCCccccCCCCeeeeCCCCCc----cCCCCCCeeCCcCC-CCCCCCCCeeecCCCCeeeeCCCCCccCCCCCCCCC
Q psy9424 246 NPCGPNALCSAEKHKQICYCQPGYT----GDAYFGCHLIDFCA-AKPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVS 320 (535)
Q Consensus 246 ~~C~~~~~C~~~~g~~~C~C~~G~~----G~~~~~C~~~~~C~-~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C~~ 320 (535)
..|.+ .|++..++|+|.|++||+ |. .|+++++|. ..+|.+ .|+++.++|+|.|++||+.....+.|..
T Consensus 11 ~~c~~--~C~~~~g~~~C~C~~G~~l~~~~~---~C~d~~eC~~~~~C~~--~C~~~~g~~~C~C~~g~~l~~d~~~C~~ 83 (386)
T 3v65_B 11 GGCAQ--KCQMIRGAVQCTCHTGYRLTEDGR---TCQDVNECAEEGYCSQ--GCTNSEGAFQCWCEAGYELRPDRRSCKA 83 (386)
T ss_dssp ----------------------------------------------CCTT--EEC-----CCEECCTTEEECTTSSCEEE
T ss_pred CCCCC--CCcCCCCCcEeECCCCceECCCCC---ccCccceeCCcCcccC--cCCCCCCCCeEEECCCceEcCCCCeECC
Confidence 44653 898888999999999998 55 788999996 468875 4999999999999999997665555654
Q ss_pred C
Q psy9424 321 A 321 (535)
Q Consensus 321 ~ 321 (535)
+
T Consensus 84 ~ 84 (386)
T 3v65_B 84 L 84 (386)
T ss_dssp C
T ss_pred c
Confidence 3
No 69
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=97.78 E-value=3.2e-06 Score=61.88 Aligned_cols=36 Identities=33% Similarity=0.839 Sum_probs=33.7
Q ss_pred cCCCCCCCCCCC--CeeeeCCCCceeeCCCCCc-CCCCC
Q psy9424 451 VDPCSPAPCGPN--AQCSVANHRPLCSCPAGLM-GLPSA 486 (535)
Q Consensus 451 ~d~C~~~~C~~~--~~C~~~~g~~~C~C~~G~~-G~~c~ 486 (535)
+|+|.++||.++ |+|++..++|+|.|++||+ |..|+
T Consensus 11 ~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~ 49 (61)
T 2k2s_B 11 PAACSSNPCGPEAAGTCKETNSGYICRCNQGYRISLDGT 49 (61)
T ss_dssp CCHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEECSS
T ss_pred CCcCcCCCCcCCCccccccCCCceEeECCCCCccCCCCC
Confidence 789989999999 8999999999999999999 98885
No 70
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=97.76 E-value=1.7e-05 Score=54.46 Aligned_cols=34 Identities=15% Similarity=0.209 Sum_probs=29.2
Q ss_pred CCCCC---CCCCCCeee--eCCCCceeeCCCCCcCCCCC
Q psy9424 453 PCSPA---PCGPNAQCS--VANHRPLCSCPAGLMGLPSA 486 (535)
Q Consensus 453 ~C~~~---~C~~~~~C~--~~~g~~~C~C~~G~~G~~c~ 486 (535)
+|.+. ||.++|+|+ +..++|+|.|++||+|..|+
T Consensus 2 ~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce 40 (45)
T 1a3p_A 2 GXPSSYDGYCLNGGVXMHIESLDSYTCNCVIGYSGDRCQ 40 (45)
T ss_dssp CCTTCCSSCCSSSCEEEECTTTSSEEEECCTTEETTTTC
T ss_pred CcccCCCCCCCCCCEEEeecCCCCEEEEcCCCCcCCcCC
Confidence 45555 999999998 67789999999999999886
No 71
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.75 E-value=6.3e-06 Score=84.59 Aligned_cols=83 Identities=19% Similarity=0.496 Sum_probs=19.7
Q ss_pred ccCCCCCCCCCCCCeeccCCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q psy9424 142 CRPACEGILCGRNALCTASDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVEC 221 (535)
Q Consensus 142 c~~~C~~~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~C 221 (535)
++|+|..+++...++|.++.++|+|.|++||.+.. ....|
T Consensus 2 ~~~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~----------------------------------------~~~~C 41 (386)
T 3v65_B 2 GEENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTE----------------------------------------DGRTC 41 (386)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcCcccCCCCCCCCCCcCCCCCcEeECCCCceECC----------------------------------------CCCcc
Confidence 36888876655456899888999999999998543 01346
Q ss_pred CCCCCCCCCCcccCCCcccCCCCCCCCCCCCccccCCCCeeeeCCCCCccCC-CCCCeeCC
Q psy9424 222 NSHADCSGDKVCEDHRCKISCLANNPCGPNALCSAEKHKQICYCQPGYTGDA-YFGCHLID 281 (535)
Q Consensus 222 ~~~~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~-~~~C~~~~ 281 (535)
.++++|.. +.+|.+ .|+++.++|+|.|.+||+... ...|..++
T Consensus 42 ~d~~eC~~---------------~~~C~~--~C~~~~g~~~C~C~~g~~l~~d~~~C~~~~ 85 (386)
T 3v65_B 42 QDVNECAE---------------EGYCSQ--GCTNSEGAFQCWCEAGYELRPDRRSCKALG 85 (386)
T ss_dssp -------------------------CCTT--EEC-----CCEECCTTEEECTTSSCEEECS
T ss_pred CccceeCC---------------cCcccC--cCCCCCCCCeEEECCCceEcCCCCeECCcc
Confidence 66777752 367875 499999999999999998432 12566543
No 72
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.71 E-value=2.7e-05 Score=55.47 Aligned_cols=38 Identities=29% Similarity=0.650 Sum_probs=33.5
Q ss_pred ccCCCCCC---CCCCCCeec--cCCCCceecCCCCCCCCCCCC
Q psy9424 142 CRPACEGI---LCGRNALCT--ASDHHATCSCKPGYVGHPGPS 179 (535)
Q Consensus 142 c~~~C~~~---~C~~~g~C~--~~~~~~~C~C~~Gf~g~~c~~ 179 (535)
++++|.+. ||.++|+|+ +..++|+|.|++||+|..|++
T Consensus 2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~ 44 (53)
T 1egf_A 2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQT 44 (53)
T ss_dssp EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSSSSCC
T ss_pred CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCCcCCc
Confidence 37788775 999999999 788999999999999999874
No 73
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.61 E-value=2.5e-05 Score=53.75 Aligned_cols=35 Identities=26% Similarity=0.617 Sum_probs=30.4
Q ss_pred cCCCCC---CCCCCCCeeeeCC--CCceeeCCCCCcCCCCC
Q psy9424 451 VDPCSP---APCGPNAQCSVAN--HRPLCSCPAGLMGLPSA 486 (535)
Q Consensus 451 ~d~C~~---~~C~~~~~C~~~~--g~~~C~C~~G~~G~~c~ 486 (535)
|++|.+ +||.| |+|++.. ++|.|.|++||+|..|+
T Consensus 3 i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce 42 (46)
T 1k36_A 3 ITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCE 42 (46)
T ss_dssp EECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSSTTSC
T ss_pred cccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCccCCCC
Confidence 678876 89999 8999754 68999999999999986
No 74
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.57 E-value=9.3e-06 Score=85.22 Aligned_cols=41 Identities=22% Similarity=0.550 Sum_probs=30.4
Q ss_pred ccCCCCCCCcccCcCCcCCCCCCCCCCCCCCeeeecCCCceeeCCCCCcCC
Q psy9424 15 LQQVPGLASAACVDGRCRNPCEADEVCGRNAECAVVNHTPRCTCVAGTVGD 65 (535)
Q Consensus 15 c~c~~g~~g~~C~~~~~~d~C~~~~~C~~~g~C~~~~~~~~C~C~~Gf~G~ 65 (535)
.+|.++|.|..|. +++|. .+|.+ |+|++. ++|.|.+||+|.
T Consensus 379 ~~C~~~~~g~~c~----~~~C~--~~C~n-G~C~~~---~~C~C~~G~~G~ 419 (463)
T 2wg3_C 379 EECRATVQPAQTL----TSECS--RLCRN-GYCTPT---GKCCCSPGWEGD 419 (463)
T ss_dssp GGGCCCCCCCCCC----CCHHH--HHCCS-EEECTT---SCEEECTTEEST
T ss_pred ccCCCCCcCCCCc----ccccc--CCCCC-CccCCC---CeECCCCCcCCC
Confidence 5777888888887 55675 35775 788754 478888888887
No 75
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=97.49 E-value=6.7e-05 Score=51.38 Aligned_cols=34 Identities=24% Similarity=0.426 Sum_probs=29.3
Q ss_pred CCCCC---CCCCCCeec--cCCCCceecCCCCCCCCCCC
Q psy9424 145 ACEGI---LCGRNALCT--ASDHHATCSCKPGYVGHPGP 178 (535)
Q Consensus 145 ~C~~~---~C~~~g~C~--~~~~~~~C~C~~Gf~g~~c~ 178 (535)
+|.+. ||.++|+|+ +..++|+|.|++||+|..|+
T Consensus 2 ~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce 40 (45)
T 1a3p_A 2 GXPSSYDGYCLNGGVXMHIESLDSYTCNCVIGYSGDRCQ 40 (45)
T ss_dssp CCTTCCSSCCSSSCEEEECTTTSSEEEECCTTEETTTTC
T ss_pred CcccCCCCCCCCCCEEEeecCCCCEEEEcCCCCcCCcCC
Confidence 45555 999999998 67789999999999999976
No 76
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=97.49 E-value=2e-05 Score=57.63 Aligned_cols=40 Identities=25% Similarity=0.597 Sum_probs=35.5
Q ss_pred CCeeCCcCCCCCCCCC--CeeecCCCCeeeeCCCCCc-cCCCC
Q psy9424 276 GCHLIDFCAAKPCGPG--ARCDNSRGSYKCLCPLGLV-GDPYG 315 (535)
Q Consensus 276 ~C~~~~~C~~~~C~~~--~~C~~~~g~~~C~C~~Gy~-g~~c~ 315 (535)
.++++++|.++||.++ ++|++..++|+|.|++||+ |..|+
T Consensus 7 ~~~~~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~ 49 (61)
T 2k2s_B 7 LSETPAACSSNPCGPEAAGTCKETNSGYICRCNQGYRISLDGT 49 (61)
T ss_dssp CTTSCCHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEECSS
T ss_pred hcCCCCcCcCCCCcCCCccccccCCCceEeECCCCCccCCCCC
Confidence 4567899999999998 8999999999999999999 98764
No 77
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=97.42 E-value=3.3e-05 Score=57.20 Aligned_cols=36 Identities=22% Similarity=0.497 Sum_probs=31.3
Q ss_pred cCCCCCCCCCCCCeeee-----CCCCceeeCCCCCcCCCCC
Q psy9424 451 VDPCSPAPCGPNAQCSV-----ANHRPLCSCPAGLMGLPSA 486 (535)
Q Consensus 451 ~d~C~~~~C~~~~~C~~-----~~g~~~C~C~~G~~G~~c~ 486 (535)
.|+|.++||.|+|+|++ ..++|+|.|++||+|..|+
T Consensus 6 c~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce 46 (63)
T 1hae_A 6 CAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCT 46 (63)
T ss_dssp CCHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSC
T ss_pred cCCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccC
Confidence 35666889999999997 5689999999999999986
No 78
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.33 E-value=6.6e-05 Score=51.61 Aligned_cols=36 Identities=22% Similarity=0.479 Sum_probs=30.6
Q ss_pred cCCCCC---CCCCCCCeeccCC--CCceecCCCCCCCCCCCC
Q psy9424 143 RPACEG---ILCGRNALCTASD--HHATCSCKPGYVGHPGPS 179 (535)
Q Consensus 143 ~~~C~~---~~C~~~g~C~~~~--~~~~C~C~~Gf~g~~c~~ 179 (535)
+++|.+ +||.+ |+|++.. ++|+|.|++||+|..|++
T Consensus 3 i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce~ 43 (46)
T 1k36_A 3 ITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEH 43 (46)
T ss_dssp EECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSSTTSCC
T ss_pred cccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCccCCCCc
Confidence 677877 89998 8999754 679999999999999874
No 79
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=97.30 E-value=0.00014 Score=74.07 Aligned_cols=88 Identities=17% Similarity=0.369 Sum_probs=31.8
Q ss_pred ceeeecCCCeeeeCCCCCcCCCCCCCCcc----CCCCCCcccCC--CCCccCCCCCCCCCcCCCCCCCCCCcCCCCCcCC
Q psy9424 380 SLCNVLTHRKVCFCPRGFTGDPETECVRI----TCLSHADCYPG--GGSLCLANLCTRGCSADTDCPAALSCRSAECVDP 453 (535)
Q Consensus 380 ~~C~~~~g~~~C~C~~G~~g~~~~~C~~~----~C~~~~~C~~~--~g~~C~~g~C~~g~~~~~~C~~g~~C~~~~c~d~ 453 (535)
+.|....+.++|.|+.+|+|..++.|.+. |+.++..+... ....|.+ |.-+. .+..|...
T Consensus 304 s~C~~~~g~~~C~C~~~ttG~~CE~C~pgy~~~P~~~gt~~p~~~g~~~~C~p--C~Cn~-------~g~~CD~~----- 369 (426)
T 3zyj_B 304 TVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGAANACIP--SISSI-------GTNVCDNE----- 369 (426)
T ss_dssp SCEEEETTEEEECCCTTEESSSSCEECTTCCSSCCCCCBCCSSSSCBCCCCCC--CCC----------------------
T ss_pred hhcCCCCCCceeeCCCCCcCCCccccccccccCcccCCcccccCCCCCCcccC--CCCCC-------CcCccccC-----
Confidence 46888778899999999999999888754 55554332111 1234542 11111 24455433
Q ss_pred CCCCCCCCCCeeeeCCCCceeeCCCCCcCCCCC
Q psy9424 454 CSPAPCGPNAQCSVANHRPLCSCPAGLMGLPSA 486 (535)
Q Consensus 454 C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~ 486 (535)
..+|.|+++|.+.. +|+|++||+|..|+
T Consensus 370 --t~~C~ngg~C~~~~---~C~C~~G~~G~~Ce 397 (426)
T 3zyj_B 370 --LLHCQNGGTCHNNV---RCLCPAAYTGILCE 397 (426)
T ss_dssp ---------------------------------
T ss_pred --cccCCCCCCcCCCC---CCcCCCCCcCCCCc
Confidence 46899999998765 89999999999986
No 80
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=97.20 E-value=3.8e-05 Score=54.39 Aligned_cols=41 Identities=17% Similarity=0.261 Sum_probs=32.4
Q ss_pred CCccCCCCCCCcccCcCCcCCCCCCCCCCCCCCeeee----cCCCceeeCCCCCcCCCCC
Q psy9424 13 QHLQQVPGLASAACVDGRCRNPCEADEVCGRNAECAV----VNHTPRCTCVAGTVGDPKY 68 (535)
Q Consensus 13 ~~c~c~~g~~g~~C~~~~~~d~C~~~~~C~~~g~C~~----~~~~~~C~C~~Gf~G~~c~ 68 (535)
.+|.|++||+ .++|.++|+|++ ..++|+|+|++||+|..|+
T Consensus 3 ~~C~C~~g~~---------------~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce 47 (52)
T 3ca7_A 3 PTYKCPETFD---------------AWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCE 47 (52)
T ss_dssp CCBCCCHHHH---------------HHTSCTTCEEEEEEETTEEEEEEECCTTEESTTSC
T ss_pred eeeECCCCCc---------------CCcCCCCCEEecCccCCCCCEEEECCCCCcCCCCc
Confidence 4688888886 146888999997 3457999999999999543
No 81
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.11 E-value=7.4e-05 Score=78.34 Aligned_cols=43 Identities=30% Similarity=0.762 Sum_probs=29.4
Q ss_pred CccCCCCCCCCcccCCCCCCCCCCCCeeccCCCCceecCCCCCCCCCC
Q psy9424 130 EQCRSNDMGQMQCRPACEGILCGRNALCTASDHHATCSCKPGYVGHPG 177 (535)
Q Consensus 130 ~~C~~~~~G~~~c~~~C~~~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c 177 (535)
..|..+|.|..+.+++|.. +|.+ ++|++. ++|.|++||+|..|
T Consensus 379 ~~C~~~~~g~~c~~~~C~~-~C~n-G~C~~~---~~C~C~~G~~G~~C 421 (463)
T 2wg3_C 379 EECRATVQPAQTLTSECSR-LCRN-GYCTPT---GKCCCSPGWEGDFC 421 (463)
T ss_dssp GGGCCCCCCCCCCCCHHHH-HCCS-EEECTT---SCEEECTTEESTTS
T ss_pred ccCCCCCcCCCCccccccC-CCCC-CccCCC---CeECCCCCcCCCcC
Confidence 4666777777666677764 5764 677753 47888888887774
No 82
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=97.08 E-value=0.00012 Score=54.16 Aligned_cols=36 Identities=22% Similarity=0.564 Sum_probs=31.2
Q ss_pred CCCCCCCCCCCCeecc-----CCCCceecCCCCCCCCCCCC
Q psy9424 144 PACEGILCGRNALCTA-----SDHHATCSCKPGYVGHPGPS 179 (535)
Q Consensus 144 ~~C~~~~C~~~g~C~~-----~~~~~~C~C~~Gf~g~~c~~ 179 (535)
++|.++||.++|+|++ ..++|+|.|++||+|..|++
T Consensus 7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~ 47 (63)
T 1hae_A 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTE 47 (63)
T ss_dssp CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCE
T ss_pred CCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccCc
Confidence 5677789999999996 56789999999999999863
No 83
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=96.96 E-value=0.0002 Score=50.83 Aligned_cols=31 Identities=23% Similarity=0.478 Sum_probs=28.0
Q ss_pred CCCCCCCCeee--eCCCCceeeCCCCCcCCCCC
Q psy9424 456 PAPCGPNAQCS--VANHRPLCSCPAGLMGLPSA 486 (535)
Q Consensus 456 ~~~C~~~~~C~--~~~g~~~C~C~~G~~G~~c~ 486 (535)
.+||.|+|+|+ +..++|.|.|++||+|..|+
T Consensus 11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce 43 (53)
T 1nql_B 11 DGYCLHDGVCMYIEALDKYACNCVVGYIGERCQ 43 (53)
T ss_dssp CCEECTTCEEEEETTTTEEEEEECTTEESTTSC
T ss_pred CCCCCCCeEEeeecCCCCEEEecCCCCcCCCCC
Confidence 67899999998 56788999999999999986
No 84
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=96.89 E-value=0.00026 Score=50.16 Aligned_cols=31 Identities=26% Similarity=0.568 Sum_probs=26.7
Q ss_pred CCCCCCCCeee--ecCCCceeeCCCCCcCCCCC
Q psy9424 38 DEVCGRNAECA--VVNHTPRCTCVAGTVGDPKY 68 (535)
Q Consensus 38 ~~~C~~~g~C~--~~~~~~~C~C~~Gf~G~~c~ 68 (535)
.++|.++|+|+ +..++|+|+|++||+|..|.
T Consensus 11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce 43 (53)
T 1nql_B 11 DGYCLHDGVCMYIEALDKYACNCVVGYIGERCQ 43 (53)
T ss_dssp CCEECTTCEEEEETTTTEEEEEECTTEESTTSC
T ss_pred CCCCCCCeEEeeecCCCCEEEecCCCCcCCCCC
Confidence 57899999998 56678999999999999553
No 85
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=96.81 E-value=0.00039 Score=49.77 Aligned_cols=45 Identities=18% Similarity=0.449 Sum_probs=33.8
Q ss_pred CCCCC-CCCCCCCCeeeecCCCceeeCCCCCcCCCCCCCCCCCCCCCCCCCCCCCcccc
Q psy9424 33 NPCEA-DEVCGRNAECAVVNHTPRCTCVAGTVGDPKYQSGVGTSCTSSRDCIGEQQCIS 90 (535)
Q Consensus 33 d~C~~-~~~C~~~g~C~~~~~~~~C~C~~Gf~G~~c~~C~~~~~C~~~~~C~~~~~C~~ 90 (535)
|+|.. .+.|.+ .|+++.++|+|.|++||+.. .+...|.++++|.-
T Consensus 2 dEC~~~~~~C~~--~C~nt~Gsy~C~C~~Gy~L~-----------~d~~~C~didec~c 47 (55)
T 2jkh_L 2 KLCSLDNGDCDQ--FCHEEQNSVVCSCARGYTLA-----------DNGKACIPTGPYPC 47 (55)
T ss_dssp CCTTTGGGGCSS--EEEEETTEEEEECCTTEEEC-----------TTSSCEEESSSSCT
T ss_pred ccccCCCCCcCc--EeEcCCCCeEEeCCCCCEEC-----------CCCCeeccCccccC
Confidence 57764 456864 89999999999999999865 23456777777643
No 86
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=96.74 E-value=0.00055 Score=69.77 Aligned_cols=29 Identities=21% Similarity=0.577 Sum_probs=23.3
Q ss_pred CCCC-CeeccCCCCceecCCCCCCCCCCCC
Q psy9424 151 CGRN-ALCTASDHHATCSCKPGYVGHPGPS 179 (535)
Q Consensus 151 C~~~-g~C~~~~~~~~C~C~~Gf~g~~c~~ 179 (535)
|..+ ..|....+.+.|.|+.+++|..|+.
T Consensus 299 CnGHas~C~~~~g~~~C~C~~~ttG~~CE~ 328 (426)
T 3zyj_B 299 CNLHATVCVYDNSKLTCECEHNTTGPDCGK 328 (426)
T ss_dssp CSSSCSCEEEETTEEEECCCTTEESSSSCE
T ss_pred CCCchhhcCCCCCCceeeCCCCCcCCCccc
Confidence 5545 4688776778999999999999874
No 87
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=96.58 E-value=0.00068 Score=47.82 Aligned_cols=31 Identities=26% Similarity=0.459 Sum_probs=26.6
Q ss_pred CCCCCCCCeeee----CCCCceeeCCCCCcCCCCC
Q psy9424 456 PAPCGPNAQCSV----ANHRPLCSCPAGLMGLPSA 486 (535)
Q Consensus 456 ~~~C~~~~~C~~----~~g~~~C~C~~G~~G~~c~ 486 (535)
.+||.|+|+|++ ..++|+|.|++||+|..|+
T Consensus 13 ~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce 47 (52)
T 3ca7_A 13 AWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCE 47 (52)
T ss_dssp HHTSCTTCEEEEEEETTEEEEEEECCTTEESTTSC
T ss_pred CCcCCCCCEEecCccCCCCCEEEECCCCCcCCCCc
Confidence 457999999996 3467999999999999886
No 88
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=96.56 E-value=0.0015 Score=46.15 Aligned_cols=33 Identities=18% Similarity=0.325 Sum_probs=27.9
Q ss_pred cCCCCCCC---------CCCCCCCeeeecCCCceeeCCCCCcCC
Q psy9424 31 CRNPCEAD---------EVCGRNAECAVVNHTPRCTCVAGTVGD 65 (535)
Q Consensus 31 ~~d~C~~~---------~~C~~~g~C~~~~~~~~C~C~~Gf~G~ 65 (535)
.||+|... .+|. ++|+++.++|+|.|++||++.
T Consensus 3 DidEC~~~~~~~~~~~~~~C~--~~C~n~~Gsy~C~C~~Gy~~~ 44 (53)
T 1apq_A 3 DLDECASRSKSGEEDPQPQCQ--HLCHNYVGGYFCSCRPGYELQ 44 (53)
T ss_dssp SCCTTTCSTTTCCCSSSCTTS--SEEEEETTEEEEECSTTCEEC
T ss_pred ccccccCcccccccccCCCCC--CEeECCCCCeEEECCCCCeEC
Confidence 38899752 6786 489999999999999999976
No 89
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=96.55 E-value=0.0013 Score=46.36 Aligned_cols=39 Identities=31% Similarity=0.584 Sum_probs=30.5
Q ss_pred eeCCcCCC----------CCCCCCCeeecCCCCeeeeCCCCCccCCCCCCC
Q psy9424 278 HLIDFCAA----------KPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGC 318 (535)
Q Consensus 278 ~~~~~C~~----------~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C 318 (535)
++|++|.. .+|. ++|++++|+|+|.|++||++....++|
T Consensus 2 ~DidEC~~~~~~~~~~~~~~C~--~~C~n~~Gsy~C~C~~Gy~~~~d~~~C 50 (53)
T 1apq_A 2 VDLDECASRSKSGEEDPQPQCQ--HLCHNYVGGYFCSCRPGYELQEDRHSC 50 (53)
T ss_dssp CSCCTTTCSTTTCCCSSSCTTS--SEEEEETTEEEEECSTTCEECTTSSCE
T ss_pred CccccccCcccccccccCCCCC--CEeECCCCCeEEECCCCCeECCCCCcc
Confidence 35778864 4675 499999999999999999987655544
No 90
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=96.52 E-value=0.0018 Score=48.90 Aligned_cols=30 Identities=17% Similarity=0.226 Sum_probs=24.1
Q ss_pred CCCCCCCceeeecCCCeeee-CCCCCcCCCC
Q psy9424 373 QGACGVNSLCNVLTHRKVCF-CPRGFTGDPE 402 (535)
Q Consensus 373 ~~~C~~~~~C~~~~g~~~C~-C~~G~~g~~~ 402 (535)
...|..+++|+|+.|+|+|. +..||++...
T Consensus 10 ~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~~~ 40 (71)
T 2kl7_A 10 PEACKGEMKCINHYGGYLCLPRSAAVINDLH 40 (71)
T ss_dssp CCSCTTEEEEEETTCCEEEEETTSCCCSCCS
T ss_pred CCCCCCCCEeECCCCCeEecccCCccccccc
Confidence 35677788999999999998 4578987653
No 91
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=96.46 E-value=0.001 Score=47.54 Aligned_cols=43 Identities=21% Similarity=0.586 Sum_probs=34.0
Q ss_pred CcCCC--CCCCCCCeeecCCCCeeeeCCCCCccCCCCCCCCCCCCCC
Q psy9424 281 DFCAA--KPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVSASQCT 325 (535)
Q Consensus 281 ~~C~~--~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C~~~~~C~ 325 (535)
++|.. .+|. ..|++++|+|+|.|++||......++|+++++|.
T Consensus 2 dEC~~~~~~C~--~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~didec~ 46 (55)
T 2jkh_L 2 KLCSLDNGDCD--QFCHEEQNSVVCSCARGYTLADNGKACIPTGPYP 46 (55)
T ss_dssp CCTTTGGGGCS--SEEEEETTEEEEECCTTEEECTTSSCEEESSSSC
T ss_pred ccccCCCCCcC--cEeEcCCCCeEEeCCCCCEECCCCCeeccCcccc
Confidence 45543 3464 3899999999999999999877777788888874
No 92
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=96.24 E-value=0.0021 Score=48.48 Aligned_cols=35 Identities=23% Similarity=0.350 Sum_probs=29.6
Q ss_pred cCCCCCC-CCCCCCCCeeeecCCCceee-CCCCCcCC
Q psy9424 31 CRNPCEA-DEVCGRNAECAVVNHTPRCT-CVAGTVGD 65 (535)
Q Consensus 31 ~~d~C~~-~~~C~~~g~C~~~~~~~~C~-C~~Gf~G~ 65 (535)
+||||.. .++|.++++|+++.++|+|. +..||.++
T Consensus 2 DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~ 38 (71)
T 2kl7_A 2 DVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVIND 38 (71)
T ss_dssp CSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSC
T ss_pred ccccccCCCCCCCCCCEeECCCCCeEecccCCccccc
Confidence 3899985 57899889999999999998 45788765
No 93
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=96.08 E-value=0.0022 Score=48.07 Aligned_cols=46 Identities=20% Similarity=0.446 Sum_probs=37.0
Q ss_pred eeCCcCCCC--CCCCCCeeecCCC-CeeeeCCCCCccCCCCCCCCCCCCCC
Q psy9424 278 HLIDFCAAK--PCGPGARCDNSRG-SYKCLCPLGLVGDPYGAGCVSASQCT 325 (535)
Q Consensus 278 ~~~~~C~~~--~C~~~~~C~~~~g-~~~C~C~~Gy~g~~c~~~C~~~~~C~ 325 (535)
.++++|... .|. ..|+++++ +|+|.|++||......++|.++++|.
T Consensus 3 ~d~~eC~~~nggC~--h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d~dec~ 51 (69)
T 1kli_L 3 DDQLICVNENGGCE--QYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP 51 (69)
T ss_dssp SCCCCTTSGGGGCS--SEEEEETTTEEEEECCTTEEECTTSSCEEECSSSC
T ss_pred cccccccCCCCCcC--CEeEcCCCCCEEEeCCCCCeECCCCCcccCccccc
Confidence 467888653 354 38999998 89999999999888888898888874
No 94
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=96.06 E-value=0.0055 Score=48.65 Aligned_cols=64 Identities=20% Similarity=0.489 Sum_probs=51.6
Q ss_pred CCCCCCCcccc-CCCCeeeeCCCCCccCCCCCCeeC--CcCCCCC--CCCCCeeecCC-----CCeeeeCCCCCc
Q psy9424 246 NPCGPNALCSA-EKHKQICYCQPGYTGDAYFGCHLI--DFCAAKP--CGPGARCDNSR-----GSYKCLCPLGLV 310 (535)
Q Consensus 246 ~~C~~~~~C~~-~~g~~~C~C~~G~~G~~~~~C~~~--~~C~~~~--C~~~~~C~~~~-----g~~~C~C~~Gy~ 310 (535)
..|..++.|.. .++...|+|.+||.++.. .|..+ ..|+.+. |..+|.|.... +...|.|.+||.
T Consensus 10 ~~C~~NA~C~r~~~g~e~C~C~~gy~gdg~-~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~ 83 (99)
T 1ob1_C 10 KQCPQNSGCFRHLDEREECKCLLNYKQEGD-KCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDS 83 (99)
T ss_dssp CCCCTTEEEECCTTSCCEEEECTTEEEETT-EEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTC
T ss_pred CCCCCCCCeEEcCCCCEEEEecCCeecCCC-eEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCc
Confidence 45778899977 468889999999998765 58876 5787643 89999998775 678999999975
No 95
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=95.93 E-value=0.002 Score=46.46 Aligned_cols=29 Identities=28% Similarity=0.528 Sum_probs=25.3
Q ss_pred CCCCCCeeee----CCCCceeeCCCCCcCCCCC
Q psy9424 458 PCGPNAQCSV----ANHRPLCSCPAGLMGLPSA 486 (535)
Q Consensus 458 ~C~~~~~C~~----~~g~~~C~C~~G~~G~~c~ 486 (535)
+|.|+|+|+. ..++|.|.|++||+|..|+
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce 47 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCE 47 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSSC
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCCc
Confidence 8999999983 3457899999999999987
No 96
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=95.92 E-value=0.003 Score=47.35 Aligned_cols=45 Identities=16% Similarity=0.305 Sum_probs=35.1
Q ss_pred CCCCCC-CCCCCCCCeeeecCC-CceeeCCCCCcCCCCCCCCCCCCCCCCCCCCCCCccc
Q psy9424 32 RNPCEA-DEVCGRNAECAVVNH-TPRCTCVAGTVGDPKYQSGVGTSCTSSRDCIGEQQCI 89 (535)
Q Consensus 32 ~d~C~~-~~~C~~~g~C~~~~~-~~~C~C~~Gf~G~~c~~C~~~~~C~~~~~C~~~~~C~ 89 (535)
+|+|.. .+.|+. .|+++.+ +|+|.|++||... .+...|.++++|.
T Consensus 5 ~~eC~~~nggC~h--~C~n~~g~s~~C~C~~Gy~L~-----------~D~~tC~d~dec~ 51 (69)
T 1kli_L 5 QLICVNENGGCEQ--YCSDHTGTKRSCRCHEGYSLL-----------ADGVSCTPTVEYP 51 (69)
T ss_dssp CCCTTSGGGGCSS--EEEEETTTEEEEECCTTEEEC-----------TTSSCEEECSSSC
T ss_pred cccccCCCCCcCC--EeEcCCCCCEEEeCCCCCeEC-----------CCCCcccCccccc
Confidence 889975 567875 6999998 8999999999865 3346677777764
No 97
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=95.85 E-value=0.0017 Score=57.48 Aligned_cols=36 Identities=22% Similarity=0.551 Sum_probs=33.0
Q ss_pred cCCCCCCCCCCCCeeeeCCCCceeeCCCCCcCCCCC
Q psy9424 451 VDPCSPAPCGPNAQCSVANHRPLCSCPAGLMGLPSA 486 (535)
Q Consensus 451 ~d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~ 486 (535)
+++|.+.+|.++++|++..++|+|.|++||.|..|+
T Consensus 119 ~~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~~Ce 154 (162)
T 1g1s_A 119 TASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECE 154 (162)
T ss_dssp ECCCCTTGGGGSEEEEECSSSEEEEECTTEESTTSC
T ss_pred eCCCcCCCCCCCCEEecCCCCceEeCCCCCcCcccc
Confidence 567778899999999999999999999999999887
No 98
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=95.77 E-value=0.016 Score=46.25 Aligned_cols=64 Identities=20% Similarity=0.405 Sum_probs=52.3
Q ss_pred CCCCCCCcccc-CCCCeeeeCCCCCccCCCCCCeeCCc-CCCCC--CCCCCeeecCC-CCeeeeCCCCCc
Q psy9424 246 NPCGPNALCSA-EKHKQICYCQPGYTGDAYFGCHLIDF-CAAKP--CGPGARCDNSR-GSYKCLCPLGLV 310 (535)
Q Consensus 246 ~~C~~~~~C~~-~~g~~~C~C~~G~~G~~~~~C~~~~~-C~~~~--C~~~~~C~~~~-g~~~C~C~~Gy~ 310 (535)
..|..++.|.. .+|...|+|.+||.++.. .|..+++ |..+. |..++.|+... ....|.|..+|.
T Consensus 16 t~Cp~NA~C~r~~~G~e~CrCl~gY~~dg~-~Cv~~Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~ 84 (105)
T 1n1i_A 16 TNVPENAACYRYLDGTEEWRCLLGFKEVGG-KCVPASITCEENNGGCAPEAECTMDDKKEVECKCTKEGS 84 (105)
T ss_dssp SCCCTTEEEEECTTSCEEEEECTTEEECSS-SEEECCCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTC
T ss_pred CCCCCCCCeEECCCCCEeEEEECCeeccCC-EEEECCcchhhcCCCcCCCcEeEECCCCEEEeECCCCCC
Confidence 35778899987 668889999999998865 5888887 65533 99999999885 788999999974
No 99
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=95.74 E-value=0.005 Score=48.91 Aligned_cols=71 Identities=25% Similarity=0.576 Sum_probs=49.9
Q ss_pred CCCCCCCCCCeecc-CCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCC
Q psy9424 146 CEGILCGRNALCTA-SDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECNSH 224 (535)
Q Consensus 146 C~~~~C~~~g~C~~-~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~C~~~ 224 (535)
|....|+.++.|.. ..+..+|+|.+||.++. ..|.... .
T Consensus 7 C~~~~C~~NA~C~r~~~g~e~C~C~~gy~gdg-------------------------------------~~Cv~~~---~ 46 (99)
T 1ob1_C 7 CVKKQCPQNSGCFRHLDEREECKCLLNYKQEG-------------------------------------DKCVENP---N 46 (99)
T ss_dssp CCSCCCCTTEEEECCTTSCCEEEECTTEEEET-------------------------------------TEEEECS---C
T ss_pred eccCCCCCCCCeEEcCCCCEEEEecCCeecCC-------------------------------------CeEeeCC---C
Confidence 44456888999987 45889999999999987 3343320 0
Q ss_pred CCCCCCCcccCCCcccCCCCCCCCCCCCccccCC-----CCeeeeCCCCCc
Q psy9424 225 ADCSGDKVCEDHRCKISCLANNPCGPNALCSAEK-----HKQICYCQPGYT 270 (535)
Q Consensus 225 ~~C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~-----g~~~C~C~~G~~ 270 (535)
..|... ...|..+|.|+... +...|.|.+||+
T Consensus 47 ~sC~~n--------------NGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~ 83 (99)
T 1ob1_C 47 PTCNEN--------------NGGCDADAKCTEEDSGSNGKKITCECTKPDS 83 (99)
T ss_dssp CCSTTG--------------GGGCCTTEEEECCSCSSSSCCCEEEECSTTC
T ss_pred CChhhc--------------CCCcCCCceeEecCCcccCCceEeEeCCCCc
Confidence 223211 36688899998764 568999999976
No 100
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=95.49 E-value=0.0015 Score=62.68 Aligned_cols=36 Identities=28% Similarity=0.586 Sum_probs=30.4
Q ss_pred cCCCCCC-CCCCCCCCeeeecCCCceeeCCCCCcCCC
Q psy9424 31 CRNPCEA-DEVCGRNAECAVVNHTPRCTCVAGTVGDP 66 (535)
Q Consensus 31 ~~d~C~~-~~~C~~~g~C~~~~~~~~C~C~~Gf~G~~ 66 (535)
++|||.. .++|..++.|+++.++|.|.|++||+|+.
T Consensus 4 DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG 40 (285)
T 1gl4_A 4 AQQTCANNRHQCSVHAECRDYATGFCCRCVANYTGNG 40 (285)
T ss_dssp ---CHHHHGGGSCTTEEEEECSSCEEEEECTTEEECS
T ss_pred cchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCCC
Confidence 4899975 67899999999999999999999999884
No 101
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=95.37 E-value=0.0056 Score=42.85 Aligned_cols=32 Identities=28% Similarity=0.589 Sum_probs=28.5
Q ss_pred eeecCCCCeeeeCCCCCccCCCCCCCCCCCCC
Q psy9424 293 RCDNSRGSYKCLCPLGLVGDPYGAGCVSASQC 324 (535)
Q Consensus 293 ~C~~~~g~~~C~C~~Gy~g~~c~~~C~~~~~C 324 (535)
.|++++++|+|.|++||......++|++++++
T Consensus 11 ~C~n~~gs~~C~C~~Gy~L~~d~~tC~dide~ 42 (51)
T 1kig_L 11 FCREERSEVRCSCAHGYVLGDDSKSCVSTERF 42 (51)
T ss_dssp CCCEETTEECCCCCTTEEECTTSSCEEECSSS
T ss_pred EeEcCCCCeEEeCCCCcEECCCCCccccCCcc
Confidence 78999999999999999988777888888876
No 102
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=95.36 E-value=0.017 Score=48.45 Aligned_cols=56 Identities=13% Similarity=0.200 Sum_probs=37.9
Q ss_pred CCCCCCeeccCC--CCc-eecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy9424 150 LCGRNALCTASD--HHA-TCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHS 207 (535)
Q Consensus 150 ~C~~~g~C~~~~--~~~-~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~ 207 (535)
||.++|+|++.. .+| .|.|++||+|..|++....+|.+. ....+...++.++.|..
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~~~C~~g--~G~~YrG~~~~t~sG~~ 60 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSKTCYEG--NGHFYRGKASTDTMGRP 60 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEESTTSCEESSCCSBCS--SCTTCCSCCCBBTTSCB
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCccccccCcCCCccc--ccccceeeccccccCCc
Confidence 688899998874 556 999999999999997665566542 11223334455555533
No 103
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=95.32 E-value=0.014 Score=46.56 Aligned_cols=70 Identities=23% Similarity=0.453 Sum_probs=51.1
Q ss_pred CCCCCCCCCCCeecc-CCCCceecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q psy9424 145 ACEGILCGRNALCTA-SDHHATCSCKPGYVGHPGPSMGTGPSSHSGHAGGKHGPGLSPGATSHSSHSGGPVGCHRVECNS 223 (535)
Q Consensus 145 ~C~~~~C~~~g~C~~-~~~~~~C~C~~Gf~g~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~C~~~~C~~ 223 (535)
.|....|+.++.|.. .+|..+|+|..||.++. ..|...
T Consensus 12 ~C~~t~Cp~NA~C~r~~~G~e~CrCl~gY~~dg-------------------------------------~~Cv~~---- 50 (105)
T 1n1i_A 12 KCIDTNVPENAACYRYLDGTEEWRCLLGFKEVG-------------------------------------GKCVPA---- 50 (105)
T ss_dssp SCCSSCCCTTEEEEECTTSCEEEEECTTEEECS-------------------------------------SSEEEC----
T ss_pred EecCCCCCCCCCeEECCCCCEeEEEECCeeccC-------------------------------------CEEEEC----
Confidence 454456788999998 66889999999999987 223322
Q ss_pred CCC-CCCCCcccCCCcccCCCCCCCCCCCCccccCC-CCeeeeCCCCCc
Q psy9424 224 HAD-CSGDKVCEDHRCKISCLANNPCGPNALCSAEK-HKQICYCQPGYT 270 (535)
Q Consensus 224 ~~~-C~~~~~C~~~~c~~~c~~~~~C~~~~~C~~~~-g~~~C~C~~G~~ 270 (535)
+. |.. ....|..+|.|..+. ....|.|.++|+
T Consensus 51 -Np~C~~--------------nNGGCd~nAeC~~~~~~ki~C~C~~~~~ 84 (105)
T 1n1i_A 51 -SITCEE--------------NNGGCAPEAECTMDDKKEVECKCTKEGS 84 (105)
T ss_dssp -CCCTTS--------------GGGGSCTTSEEEECTTSCEEEECCSTTC
T ss_pred -Ccchhh--------------cCCCcCCCcEeEECCCCEEEeECCCCCC
Confidence 22 321 136688999998875 678999999975
No 104
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=95.24 E-value=0.0035 Score=60.20 Aligned_cols=40 Identities=25% Similarity=0.533 Sum_probs=32.9
Q ss_pred cCCCC--CCCCCCCCeeeeCCCCceeeCCCCCcCCCCCCCccccC
Q psy9424 451 VDPCS--PAPCGPNAQCSVANHRPLCSCPAGLMGLPSANTACVRT 493 (535)
Q Consensus 451 ~d~C~--~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~~~~C~~~ 493 (535)
+|||. .++|+.++.|+|+.|+|.|.|++||.|++- .|.++
T Consensus 5 iDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~---~C~d~ 46 (285)
T 1gl4_A 5 QQTCANNRHQCSVHAECRDYATGFCCRCVANYTGNGR---QCVAE 46 (285)
T ss_dssp --CHHHHGGGSCTTEEEEECSSCEEEEECTTEEECSS---SEEET
T ss_pred chhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCCCC---cCCCC
Confidence 89997 789999999999999999999999998763 36544
No 105
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=95.16 E-value=0.0057 Score=42.78 Aligned_cols=38 Identities=24% Similarity=0.598 Sum_probs=28.3
Q ss_pred CCCCCCCCeeeecCCCceeeCCCCCcCCCCCCCCCCCCCCCCCCCCCCCcc
Q psy9424 38 DEVCGRNAECAVVNHTPRCTCVAGTVGDPKYQSGVGTSCTSSRDCIGEQQC 88 (535)
Q Consensus 38 ~~~C~~~g~C~~~~~~~~C~C~~Gf~G~~c~~C~~~~~C~~~~~C~~~~~C 88 (535)
.+.|.+ .|+++.++|+|.|++||+.. .+...|.+++++
T Consensus 5 ng~C~~--~C~n~~gs~~C~C~~Gy~L~-----------~d~~tC~dide~ 42 (51)
T 1kig_L 5 NGGCDQ--FCREERSEVRCSCAHGYVLG-----------DDSKSCVSTERF 42 (51)
T ss_dssp TTSSSS--CCCEETTEECCCCCTTEEEC-----------TTSSCEEECSSS
T ss_pred CCCcCC--EeEcCCCCeEEeCCCCcEEC-----------CCCCccccCCcc
Confidence 345654 59999999999999999865 234567777664
No 106
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=95.14 E-value=0.0058 Score=44.02 Aligned_cols=29 Identities=24% Similarity=0.456 Sum_probs=24.1
Q ss_pred CCCCCCeeee----cCCCceeeCCCCCcCCCCC
Q psy9424 40 VCGRNAECAV----VNHTPRCTCVAGTVGDPKY 68 (535)
Q Consensus 40 ~C~~~g~C~~----~~~~~~C~C~~Gf~G~~c~ 68 (535)
+|.++|+|+. ....|.|.|++||+|..|+
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce 47 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCE 47 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSSC
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCCc
Confidence 8999999983 3447899999999999654
No 107
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=94.80 E-value=0.0097 Score=63.35 Aligned_cols=36 Identities=31% Similarity=0.701 Sum_probs=33.8
Q ss_pred cCCCCCCCCCCCCeeee-CCCCceeeCC-CCCcCCCCC
Q psy9424 451 VDPCSPAPCGPNAQCSV-ANHRPLCSCP-AGLMGLPSA 486 (535)
Q Consensus 451 ~d~C~~~~C~~~~~C~~-~~g~~~C~C~-~G~~G~~c~ 486 (535)
+|+|.++||.|+|+|++ ..++|.|.|+ +||+|..|+
T Consensus 2 ~d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce 39 (553)
T 1q4g_A 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCT 39 (553)
T ss_dssp CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTC
T ss_pred CCcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCC
Confidence 67888999999999999 8899999999 999999997
No 108
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=94.65 E-value=0.014 Score=62.20 Aligned_cols=36 Identities=25% Similarity=0.747 Sum_probs=32.5
Q ss_pred cCCCCCCCCCCCCeeee-CCCCceeeCC-CCCcCCCCC
Q psy9424 451 VDPCSPAPCGPNAQCSV-ANHRPLCSCP-AGLMGLPSA 486 (535)
Q Consensus 451 ~d~C~~~~C~~~~~C~~-~~g~~~C~C~-~G~~G~~c~ 486 (535)
+|+|.++||.|+|+|++ ..++|.|.|+ +||+|..|+
T Consensus 1 vd~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce 38 (587)
T 3nt1_A 1 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCT 38 (587)
T ss_dssp CCTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTC
T ss_pred CCCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCC
Confidence 57898999999999996 4588999999 999999997
No 109
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=94.64 E-value=0.0093 Score=52.65 Aligned_cols=38 Identities=21% Similarity=0.551 Sum_probs=30.0
Q ss_pred CCCCCCCCccccCCCCeeeeCCCCCccCCCCCCeeCCcCCC
Q psy9424 245 NNPCGPNALCSAEKHKQICYCQPGYTGDAYFGCHLIDFCAA 285 (535)
Q Consensus 245 ~~~C~~~~~C~~~~g~~~C~C~~G~~G~~~~~C~~~~~C~~ 285 (535)
+.+|.++++|++..++|+|.|++||+|. .|+.+++|.+
T Consensus 124 ~~~C~~~g~C~~~~~~~~c~C~~g~~G~---~Ce~~~~c~~ 161 (162)
T 1g1s_A 124 DMSCSKQGECLETIGNYTCSCYPGFYGP---ECEYVRDDDD 161 (162)
T ss_dssp TTGGGGSEEEEECSSSEEEEECTTEEST---TSCEECC---
T ss_pred CCCCCCCCEEecCCCCceEeCCCCCcCc---ccccCcccCC
Confidence 4678888899999899999999999998 6777777753
No 110
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=94.47 E-value=0.013 Score=41.31 Aligned_cols=33 Identities=21% Similarity=0.491 Sum_probs=28.7
Q ss_pred eeecCCC-CeeeeCCCCCccCCCCCCCCCCCCCC
Q psy9424 293 RCDNSRG-SYKCLCPLGLVGDPYGAGCVSASQCT 325 (535)
Q Consensus 293 ~C~~~~g-~~~C~C~~Gy~g~~c~~~C~~~~~C~ 325 (535)
.|+++.+ +|+|.|++||......++|+++++|.
T Consensus 12 ~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d~dec~ 45 (53)
T 2bz6_L 12 YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP 45 (53)
T ss_dssp EEEEETTTEEEEECCTTEEECTTSSCEEECSSSC
T ss_pred EeEcCCCCCEEeeCCCCCEECCCCCcccCCcccc
Confidence 7999888 79999999999888788888888873
No 111
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=94.25 E-value=0.042 Score=46.11 Aligned_cols=57 Identities=23% Similarity=0.519 Sum_probs=39.3
Q ss_pred CCCCCCccccCC--CCe-eeeCCCCCccCCCCCCee-CCcCCCCCCCCCCeeecCCCCeeeeCCCCCccCCCC
Q psy9424 247 PCGPNALCSAEK--HKQ-ICYCQPGYTGDAYFGCHL-IDFCAAKPCGPGARCDNSRGSYKCLCPLGLVGDPYG 315 (535)
Q Consensus 247 ~C~~~~~C~~~~--g~~-~C~C~~G~~G~~~~~C~~-~~~C~~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~ 315 (535)
+|.++++|++.. .+| +|.|++||+|. .|+. ++ .+|..+ ....|++.+..++.|..|+
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~---~Ce~~~~----~~C~~g-----~G~~YrG~~~~t~sG~~Cq 62 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQ---HCEIDKS----KTCYEG-----NGHFYRGKASTDTMGRPCL 62 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEEST---TSCEESS----CCSBCS-----SCTTCCSCCCBBTTSCBBC
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCc---cccccCc----CCCccc-----ccccceeeccccccCCccc
Confidence 688999998874 555 99999999999 5543 32 123221 1235788888888887665
No 112
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=93.82 E-value=0.02 Score=60.86 Aligned_cols=37 Identities=22% Similarity=0.524 Sum_probs=34.4
Q ss_pred cCCCCCCCCCCCCeecc-CCCCceecCC-CCCCCCCCCC
Q psy9424 143 RPACEGILCGRNALCTA-SDHHATCSCK-PGYVGHPGPS 179 (535)
Q Consensus 143 ~~~C~~~~C~~~g~C~~-~~~~~~C~C~-~Gf~g~~c~~ 179 (535)
+|+|.++||.++|+|++ ..++|+|.|. +||+|..||+
T Consensus 2 ~d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~ 40 (553)
T 1q4g_A 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI 40 (553)
T ss_dssp CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTCE
T ss_pred CCcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCCC
Confidence 57898999999999999 8899999999 9999999985
No 113
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=93.78 E-value=0.021 Score=40.19 Aligned_cols=38 Identities=16% Similarity=0.296 Sum_probs=28.5
Q ss_pred CCCCCCCeeeecCC-CceeeCCCCCcCCCCCCCCCCCCCCCCCCCCCCCccc
Q psy9424 39 EVCGRNAECAVVNH-TPRCTCVAGTVGDPKYQSGVGTSCTSSRDCIGEQQCI 89 (535)
Q Consensus 39 ~~C~~~g~C~~~~~-~~~C~C~~Gf~G~~c~~C~~~~~C~~~~~C~~~~~C~ 89 (535)
+.|++ .|+++.+ +|+|.|++||+.. .+...|.++++|.
T Consensus 7 ggC~~--~C~n~~ggs~~C~C~~Gy~L~-----------~Dg~tC~d~dec~ 45 (53)
T 2bz6_L 7 GGCEQ--YCSDHTGTKRSCRCHEGYSLL-----------ADGVSCTPTVEYP 45 (53)
T ss_dssp GGCSS--EEEEETTTEEEEECCTTEEEC-----------TTSSCEEECSSSC
T ss_pred CCcCC--EeEcCCCCCEEeeCCCCCEEC-----------CCCCcccCCcccc
Confidence 34654 6999988 7999999999865 2346677777763
No 114
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=93.66 E-value=0.024 Score=50.07 Aligned_cols=36 Identities=22% Similarity=0.609 Sum_probs=32.0
Q ss_pred cCCCCCCCCCCCCeeeeCCCCceeeCCCCCcCCCCC
Q psy9424 451 VDPCSPAPCGPNAQCSVANHRPLCSCPAGLMGLPSA 486 (535)
Q Consensus 451 ~d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~ 486 (535)
+..|.+.+|.++++|++..++|.|.|++||.|..|+
T Consensus 119 ~~~~~~~~C~~~g~C~~~~~~~~c~C~~g~~g~~C~ 154 (164)
T 3cfw_A 119 TASCQPWSCSGHGECVEIINNYTCNCDVGYYGPQCQ 154 (164)
T ss_dssp ECCCCTTSSCSSEEEEEETTEEEEEECTTCBSSSSC
T ss_pred cCCCCCCcCCCCCeecccCCCceeeeCCCccccccc
Confidence 455667889999999999999999999999999987
No 115
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=93.22 E-value=0.072 Score=36.83 Aligned_cols=35 Identities=29% Similarity=0.706 Sum_probs=26.4
Q ss_pred CCCCC--CCCCCCCCeeeec--CCCceeeCCCCCcCCCCC
Q psy9424 33 NPCEA--DEVCGRNAECAVV--NHTPRCTCVAGTVGDPKY 68 (535)
Q Consensus 33 d~C~~--~~~C~~~g~C~~~--~~~~~C~C~~Gf~G~~c~ 68 (535)
.+|.. .+.|.++ +|+.. ...+.|.|++||+|.+|.
T Consensus 6 ~~C~~~~~~yC~nG-~C~~~~~~~~~~C~C~~gy~G~RCe 44 (50)
T 3e50_C 6 NDCPDSHTQFCFHG-TCRFLVQEDKPACVCHSGYVGARCE 44 (50)
T ss_pred cccChhhcCcccCC-EEeeccCCCCeEEECCCCCcccCCC
Confidence 35554 5789875 99864 357899999999999653
No 116
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=93.19 E-value=0.035 Score=59.26 Aligned_cols=37 Identities=19% Similarity=0.530 Sum_probs=33.0
Q ss_pred cCCCCCCCCCCCCeecc-CCCCceecCC-CCCCCCCCCC
Q psy9424 143 RPACEGILCGRNALCTA-SDHHATCSCK-PGYVGHPGPS 179 (535)
Q Consensus 143 ~~~C~~~~C~~~g~C~~-~~~~~~C~C~-~Gf~g~~c~~ 179 (535)
+++|.++||.++|+|++ ..++|.|.|+ +||+|..|++
T Consensus 1 vd~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~ 39 (587)
T 3nt1_A 1 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39 (587)
T ss_dssp CCTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTCE
T ss_pred CCCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCCC
Confidence 47899999999999996 4588999999 9999999985
No 117
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=93.17 E-value=0.037 Score=38.40 Aligned_cols=36 Identities=25% Similarity=0.636 Sum_probs=26.6
Q ss_pred CCCCCC--CCCCCCCCeeee--cCCCceeeCCCCCcCCCCC
Q psy9424 32 RNPCEA--DEVCGRNAECAV--VNHTPRCTCVAGTVGDPKY 68 (535)
Q Consensus 32 ~d~C~~--~~~C~~~g~C~~--~~~~~~C~C~~Gf~G~~c~ 68 (535)
..+|.. .+.|.+ |+|+- ..+.+.|+|++||+|.+|+
T Consensus 5 ~~~C~~~~~~yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe 44 (50)
T 1iox_A 5 FSRCPKQYKHYCIK-GRCRFVVAEQTPSCVCDEGYIGARCE 44 (50)
T ss_dssp CEECCGGGTTSCTT-CCEEEETTTTEEEECCCTTEETTTTC
T ss_pred ccccChhhcCcccC-CEEEeEcCCCCeEEECCCCcccCCCC
Confidence 345543 578888 89964 3456899999999999654
No 118
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=93.08 E-value=0.083 Score=36.52 Aligned_cols=30 Identities=23% Similarity=0.635 Sum_probs=25.1
Q ss_pred CCCCCCCCeeeeC--CCCceeeCCCCCcCCCCC
Q psy9424 456 PAPCGPNAQCSVA--NHRPLCSCPAGLMGLPSA 486 (535)
Q Consensus 456 ~~~C~~~~~C~~~--~g~~~C~C~~G~~G~~c~ 486 (535)
.+.|.|+ +|... .+.+.|.|++||+|..|+
T Consensus 13 ~~yC~nG-~C~~~~~~~~~~C~C~~gy~G~RCe 44 (50)
T 3e50_C 13 TQFCFHG-TCRFLVQEDKPACVCHSGYVGARCE 44 (50)
T ss_pred cCcccCC-EEeeccCCCCeEEECCCCCcccCCC
Confidence 5678876 99864 467999999999999986
No 119
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=92.89 E-value=0.083 Score=36.55 Aligned_cols=36 Identities=28% Similarity=0.620 Sum_probs=26.8
Q ss_pred CCCCCC--CCCCCCCCeeee--cCCCceeeCCCCCcCCCCC
Q psy9424 32 RNPCEA--DEVCGRNAECAV--VNHTPRCTCVAGTVGDPKY 68 (535)
Q Consensus 32 ~d~C~~--~~~C~~~g~C~~--~~~~~~C~C~~Gf~G~~c~ 68 (535)
.++|.. .+.|.+ |+|+- ..+.+.|.|++||+|++|+
T Consensus 9 ~~~C~~~~~~yC~n-G~C~~i~~~~~~~C~C~~gy~G~RCe 48 (50)
T 2rnl_A 9 KNPCNAEFQNFCIH-GECKYIEHLEAVTCKCQQEYFGERCG 48 (50)
T ss_dssp CCTTTTTGGGTCSS-SEEEEETTTTEEEEECCSSCCSSSCC
T ss_pred CcccCchhhCcCCC-CEEEEecCCCCeeEECCCCccccccc
Confidence 456664 468886 69974 4457899999999999653
No 120
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=92.71 E-value=0.02 Score=61.68 Aligned_cols=54 Identities=17% Similarity=0.321 Sum_probs=43.2
Q ss_pred ccchhccCCCccCCCCCCCcccCcCCcCCCCCCCCCCCCCCeeeecCCCceeeCCCCCcCCCCC
Q psy9424 5 QVQWQQISQHLQQVPGLASAACVDGRCRNPCEADEVCGRNAECAVVNHTPRCTCVAGTVGDPKY 68 (535)
Q Consensus 5 ~~~~~~~~~~c~c~~g~~g~~C~~~~~~d~C~~~~~C~~~g~C~~~~~~~~C~C~~Gf~G~~c~ 68 (535)
.+.|-+.... .|.+||+|++|.. ...|. ..|..||.|++. +|+|.+||+|.+|.
T Consensus 511 rFRw~q~~~~-~C~~gw~g~dc~i---~~~Cp--~~C~ghG~C~~G----~C~Cd~G~~G~~C~ 564 (725)
T 2e26_A 511 RFRWHQPAPF-DKQQTWAIDNVYI---GDGCL--DMCSGHGRCVQG----SCVCDEQWGGLYCD 564 (725)
T ss_dssp EEEEEECSSC-CTTCCEEEEEEEE---ESCSS--GGGGGSEEEETT----EEEECTTEESTTSC
T ss_pred eEEeccccCC-ccCCCcccccccc---cCCCC--cccCCCcEECCC----CEeeCCCccCCCcC
Confidence 4567776653 8899999999993 24675 578899999975 89999999999765
No 121
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=92.02 E-value=0.059 Score=37.33 Aligned_cols=30 Identities=27% Similarity=0.668 Sum_probs=24.5
Q ss_pred CCCCCCCCeeee--CCCCceeeCCCCCcCCCCC
Q psy9424 456 PAPCGPNAQCSV--ANHRPLCSCPAGLMGLPSA 486 (535)
Q Consensus 456 ~~~C~~~~~C~~--~~g~~~C~C~~G~~G~~c~ 486 (535)
.+.|.| |+|.. ..+.+.|.|++||+|..|+
T Consensus 13 ~~yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe 44 (50)
T 1iox_A 13 KHYCIK-GRCRFVVAEQTPSCVCDEGYIGARCE 44 (50)
T ss_dssp TTSCTT-CCEEEETTTTEEEECCCTTEETTTTC
T ss_pred cCcccC-CEEEeEcCCCCeEEECCCCcccCCCC
Confidence 567888 79963 4567899999999999986
No 122
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=91.97 E-value=0.11 Score=35.94 Aligned_cols=30 Identities=17% Similarity=0.381 Sum_probs=24.1
Q ss_pred CCCCCCCCeeee--CCCCceeeCCCCCcCCCCC
Q psy9424 456 PAPCGPNAQCSV--ANHRPLCSCPAGLMGLPSA 486 (535)
Q Consensus 456 ~~~C~~~~~C~~--~~g~~~C~C~~G~~G~~c~ 486 (535)
.+.|.+ |+|.. ..+.+.|.|++||+|..|+
T Consensus 17 ~~yC~n-G~C~~i~~~~~~~C~C~~gy~G~RCe 48 (50)
T 2rnl_A 17 QNFCIH-GECKYIEHLEAVTCKCQQEYFGERCG 48 (50)
T ss_dssp GGTCSS-SEEEEETTTTEEEEECCSSCCSSSCC
T ss_pred hCcCCC-CEEEEecCCCCeeEECCCCccccccc
Confidence 467886 59974 3457899999999999986
No 123
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=91.88 E-value=0.074 Score=40.46 Aligned_cols=36 Identities=33% Similarity=0.771 Sum_probs=26.1
Q ss_pred CCCCCC--CCCCCCCCeeeec--CCCceeeCCCCCcCCCCC
Q psy9424 32 RNPCEA--DEVCGRNAECAVV--NHTPRCTCVAGTVGDPKY 68 (535)
Q Consensus 32 ~d~C~~--~~~C~~~g~C~~~--~~~~~C~C~~Gf~G~~c~ 68 (535)
.++|.. .+.|.++ +|+.. .+.+.|.|.+||+|..|+
T Consensus 37 ~~pC~~~~~~yClnG-~C~~i~~~~~~~C~C~~GYtG~RCE 76 (79)
T 1xdt_R 37 RDPCLRKYKDFCIHG-ECKYVKELRAPSCICHPGYHGERCH 76 (79)
T ss_dssp --CTTTTTTTCCSSE-EECCBGGGTBCCEEECTTEESTTCC
T ss_pred CCCCCccccCcCCCC-EeeeecCCCCeEEEcCCCccccccc
Confidence 567764 5789875 99543 357899999999999653
No 124
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=91.74 E-value=0.079 Score=46.61 Aligned_cols=33 Identities=24% Similarity=0.626 Sum_probs=28.9
Q ss_pred CCCCCCCCCCCCCeeeecCCCceeeCCCCCcCCC
Q psy9424 33 NPCEADEVCGRNAECAVVNHTPRCTCVAGTVGDP 66 (535)
Q Consensus 33 d~C~~~~~C~~~g~C~~~~~~~~C~C~~Gf~G~~ 66 (535)
..|. ..+|+++|+|.+...+|.|+|++||+|..
T Consensus 120 ~~~~-~~~C~~~g~C~~~~~~~~c~C~~g~~g~~ 152 (164)
T 3cfw_A 120 ASCQ-PWSCSGHGECVEIINNYTCNCDVGYYGPQ 152 (164)
T ss_dssp CCCC-TTSSCSSEEEEEETTEEEEEECTTCBSSS
T ss_pred CCCC-CCcCCCCCeecccCCCceeeeCCCccccc
Confidence 3555 57899999999999999999999999984
No 125
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=91.48 E-value=0.052 Score=48.25 Aligned_cols=50 Identities=28% Similarity=0.608 Sum_probs=37.2
Q ss_pred CCCccCCCCCCeeCCcCCCCC-----CCCCCeeecCCCCeeeeCCCCCccCCCCCCCCC
Q psy9424 267 PGYTGDAYFGCHLIDFCAAKP-----CGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVS 320 (535)
Q Consensus 267 ~G~~G~~~~~C~~~~~C~~~~-----C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C~~ 320 (535)
+||.+.. .+.++++|...+ |.. .|++..++|.|.|++||++....++|++
T Consensus 113 ~Gf~~~~--~~~di~eC~~~~~~~~~C~~--~C~n~~g~~~C~C~~Gy~l~~d~~~C~~ 167 (170)
T 1szb_A 113 TGFEAFY--AAEDIDECQVAPGEAPTCDH--HCHNHLGGFYCSCRAGYVLHRNKRTCSE 167 (170)
T ss_dssp CEEEEEE--EEEECCTTCCCTTSCCSSSS--EEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred cCceeee--eccccCcccCCCCCCCccCC--ccccCCCCEEEeCCCCcEECCCCCcccc
Confidence 6777653 346788997643 654 8999999999999999997765555543
No 126
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=91.33 E-value=0.039 Score=48.15 Aligned_cols=36 Identities=22% Similarity=0.651 Sum_probs=32.6
Q ss_pred cCCCCCCCCCCCCeeeeCCCCceeeCCCCCcCCCCC
Q psy9424 451 VDPCSPAPCGPNAQCSVANHRPLCSCPAGLMGLPSA 486 (535)
Q Consensus 451 ~d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~ 486 (535)
+++|.+.||.+++.|.+...+|.|.|.+||+|+.|+
T Consensus 119 ~~~~~~~pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce 154 (157)
T 1g1t_A 119 TAACTNTSCSGHGECVETINNYTCKCDPGFSGLKCE 154 (157)
T ss_dssp ECCCCTTGGGGSEEEEEETTEEEEEECTTEESTTSC
T ss_pred cCCCCCCCCCCCCEeecCCCCeeEECCCCccCcccc
Confidence 566777899999999999999999999999999986
No 127
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=91.10 E-value=0.078 Score=40.32 Aligned_cols=35 Identities=29% Similarity=0.610 Sum_probs=26.2
Q ss_pred cCCCC---CCCCCCCCeeeeC--CCCceeeCCCCCcCCCCC
Q psy9424 451 VDPCS---PAPCGPNAQCSVA--NHRPLCSCPAGLMGLPSA 486 (535)
Q Consensus 451 ~d~C~---~~~C~~~~~C~~~--~g~~~C~C~~G~~G~~c~ 486 (535)
.++|. .+.|.|+ +|+.. .+.+.|.|++||+|..|+
T Consensus 37 ~~pC~~~~~~yClnG-~C~~i~~~~~~~C~C~~GYtG~RCE 76 (79)
T 1xdt_R 37 RDPCLRKYKDFCIHG-ECKYVKELRAPSCICHPGYHGERCH 76 (79)
T ss_dssp --CTTTTTTTCCSSE-EECCBGGGTBCCEEECTTEESTTCC
T ss_pred CCCCCccccCcCCCC-EeeeecCCCCeEEEcCCCccccccc
Confidence 45555 6788886 99543 367899999999999986
No 128
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=91.08 E-value=0.17 Score=45.27 Aligned_cols=28 Identities=32% Similarity=0.864 Sum_probs=24.3
Q ss_pred CCCCCCCCeeeeCCCCceeeCCCCCcCCCCC
Q psy9424 456 PAPCGPNAQCSVANHRPLCSCPAGLMGLPSA 486 (535)
Q Consensus 456 ~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~ 486 (535)
..+|.|+|.|+. ..+|.|++||.|..|+
T Consensus 152 ~~~C~ngG~Cv~---P~~C~C~~Gw~G~~C~ 179 (188)
T 2ygo_A 152 PGGCRNGGFCNE---RRICECPDGFHGPHCE 179 (188)
T ss_dssp TTCCCTTCEECT---TSCEECCTTCBTTTTC
T ss_pred CCCCCCCCEeCC---CCcccCcCCCCCCCCc
Confidence 578999999984 3489999999999986
No 129
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=90.59 E-value=0.058 Score=47.96 Aligned_cols=43 Identities=21% Similarity=0.441 Sum_probs=33.8
Q ss_pred CCCCCcccCcCCcCCCCCC-CC---CCCCCCeeeecCCCceeeCCCCCcCC
Q psy9424 19 PGLASAACVDGRCRNPCEA-DE---VCGRNAECAVVNHTPRCTCVAGTVGD 65 (535)
Q Consensus 19 ~g~~g~~C~~~~~~d~C~~-~~---~C~~~g~C~~~~~~~~C~C~~Gf~G~ 65 (535)
+||.+...... +++|.. .. +|.+ .|+++.++|+|.|++||++.
T Consensus 113 ~Gf~~~~~~~d--i~eC~~~~~~~~~C~~--~C~n~~g~~~C~C~~Gy~l~ 159 (170)
T 1szb_A 113 TGFEAFYAAED--IDECQVAPGEAPTCDH--HCHNHLGGFYCSCRAGYVLH 159 (170)
T ss_dssp CEEEEEEEEEE--CCTTCCCTTSCCSSSS--EEEEETTEEEEECCTTEEEC
T ss_pred cCceeeeeccc--cCcccCCCCCCCccCC--ccccCCCCEEEeCCCCcEEC
Confidence 78887775432 889985 22 2876 79999999999999999855
No 130
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=90.49 E-value=0.044 Score=47.82 Aligned_cols=37 Identities=27% Similarity=0.694 Sum_probs=33.0
Q ss_pred cCCCCCCCCCCCCeeccCCCCceecCCCCCCCCCCCC
Q psy9424 143 RPACEGILCGRNALCTASDHHATCSCKPGYVGHPGPS 179 (535)
Q Consensus 143 ~~~C~~~~C~~~g~C~~~~~~~~C~C~~Gf~g~~c~~ 179 (535)
+++|.+.||.+++.|.+....|.|.|.+||+|+.||+
T Consensus 119 ~~~~~~~pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce~ 155 (157)
T 1g1t_A 119 TAACTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQ 155 (157)
T ss_dssp ECCCCTTGGGGSEEEEEETTEEEEEECTTEESTTSCE
T ss_pred cCCCCCCCCCCCCEeecCCCCeeEECCCCccCccccc
Confidence 4677778999999999999999999999999999863
No 131
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=90.31 E-value=0.24 Score=35.51 Aligned_cols=30 Identities=27% Similarity=0.429 Sum_probs=24.3
Q ss_pred eeecCC-CCeeeeCCCCCccCCCCCCCCCCC
Q psy9424 293 RCDNSR-GSYKCLCPLGLVGDPYGAGCVSAS 322 (535)
Q Consensus 293 ~C~~~~-g~~~C~C~~Gy~g~~c~~~C~~~~ 322 (535)
.|++++ ++|+|.|++||......++|++++
T Consensus 12 ~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d~~ 42 (59)
T 2wph_E 12 FCKNSADNKVVCSCTEGYRLAENQKSCEPAV 42 (59)
T ss_dssp EEEECSTTCEEEECCTTEEECTTSSCEEESS
T ss_pred EeEeCCCCCEEeeCCCCcEECCCCCcccCCC
Confidence 788888 599999999998877777777653
No 132
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=90.16 E-value=0.16 Score=45.30 Aligned_cols=38 Identities=21% Similarity=0.426 Sum_probs=29.9
Q ss_pred CCcccCcCCcCCCCCCCCCCCCCCeeeecCCCceeeCCCCCcCCCCC
Q psy9424 22 ASAACVDGRCRNPCEADEVCGRNAECAVVNHTPRCTCVAGTVGDPKY 68 (535)
Q Consensus 22 ~g~~C~~~~~~d~C~~~~~C~~~g~C~~~~~~~~C~C~~Gf~G~~c~ 68 (535)
+.+.|..+ .|. .+|.++|.|+..+ +|.|++||+|..|+
T Consensus 142 ~~K~C~~~----~C~--~~C~ngG~Cv~P~---~C~C~~Gw~G~~C~ 179 (188)
T 2ygo_A 142 FFKTCQQA----ECP--GGCRNGGFCNERR---ICECPDGFHGPHCE 179 (188)
T ss_dssp EEEEECCC----CCT--TCCCTTCEECTTS---CEECCTTCBTTTTC
T ss_pred ecccccCC----ccC--CCCCCCCEeCCCC---cccCcCCCCCCCCc
Confidence 36678754 665 6899999999754 89999999999654
No 133
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=88.89 E-value=0.38 Score=41.47 Aligned_cols=38 Identities=13% Similarity=0.304 Sum_probs=29.7
Q ss_pred CCCCCCeeccCC--CCc-eecCCCCCCCCCCCCCCCCCCCC
Q psy9424 150 LCGRNALCTASD--HHA-TCSCKPGYVGHPGPSMGTGPSSH 187 (535)
Q Consensus 150 ~C~~~g~C~~~~--~~~-~C~C~~Gf~g~~c~~~~~~~~~~ 187 (535)
||.++|+|+... ..+ .|.|++||.|..|++....+|.+
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~~~~~C~~ 54 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSKTCYE 54 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEESTTSCEESSCCEEC
T ss_pred CCCCCCCcCCCccccCCccccCCCCCCCCceeccccccCCC
Confidence 789999998752 455 89999999999998765555543
No 134
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=87.34 E-value=0.4 Score=48.95 Aligned_cols=36 Identities=17% Similarity=0.415 Sum_probs=33.0
Q ss_pred cCCCCCCCCCCCCeeeeCCCCceeeCCC-CCcCCCCC
Q psy9424 451 VDPCSPAPCGPNAQCSVANHRPLCSCPA-GLMGLPSA 486 (535)
Q Consensus 451 ~d~C~~~~C~~~~~C~~~~g~~~C~C~~-G~~G~~c~ 486 (535)
.++|...||.++++|+...++|.|.|+. ||.|..|+
T Consensus 185 ~~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~ 221 (410)
T 3asi_A 185 STTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCN 221 (410)
T ss_dssp SSCCCTTSSSTTCEEEECSSSEEEECTTTSEESTTSC
T ss_pred CCCcccccCCCCCEecCCCCCceEeccCCcccCCCCC
Confidence 5788889999999999999999999996 99999986
No 135
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=86.78 E-value=1.3 Score=44.80 Aligned_cols=28 Identities=25% Similarity=0.605 Sum_probs=19.5
Q ss_pred CCCCCe-eeecCC----CceeeCCCCCcCCCCC
Q psy9424 41 CGRNAE-CAVVNH----TPRCTCVAGTVGDPKY 68 (535)
Q Consensus 41 C~~~g~-C~~~~~----~~~C~C~~Gf~G~~c~ 68 (535)
|.+|+. |..... ..+|.|..+++|..|+
T Consensus 268 CnGHA~~C~~~~~~~~~~g~C~C~hnT~G~~CE 300 (403)
T 2y38_A 268 CHGHADVCDAKDPLDPFRLQCACQHNTCGGSCD 300 (403)
T ss_dssp CTTBCSCEEESCTTSTTCEEECCCTTEESSSCC
T ss_pred cCCCccccCCCCCCCccceEeECcCcCcCCCCC
Confidence 666665 865321 3569999999999765
No 136
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=85.58 E-value=0.53 Score=33.68 Aligned_cols=30 Identities=20% Similarity=0.528 Sum_probs=22.0
Q ss_pred CeeeeCC-CCceeeCCCCCcCCCCCCCccccC
Q psy9424 463 AQCSVAN-HRPLCSCPAGLMGLPSANTACVRT 493 (535)
Q Consensus 463 ~~C~~~~-g~~~C~C~~G~~G~~c~~~~C~~~ 493 (535)
..|++++ ++|+|.|++||....- ...|.++
T Consensus 11 ~~C~n~~~gs~~C~C~~Gy~L~~D-~~tC~d~ 41 (59)
T 2wph_E 11 QFCKNSADNKVVCSCTEGYRLAEN-QKSCEPA 41 (59)
T ss_dssp SEEEECSTTCEEEECCTTEEECTT-SSCEEES
T ss_pred CEeEeCCCCCEEeeCCCCcEECCC-CCcccCC
Confidence 4699998 6999999999986542 2345544
No 137
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=84.80 E-value=0.87 Score=45.70 Aligned_cols=29 Identities=21% Similarity=0.328 Sum_probs=20.7
Q ss_pred CCCCCeec--cCCCCceecCCCCCCCCCCCC
Q psy9424 151 CGRNALCT--ASDHHATCSCKPGYVGHPGPS 179 (535)
Q Consensus 151 C~~~g~C~--~~~~~~~C~C~~Gf~g~~c~~ 179 (535)
|..++.+. +..+.+.|.|++||.|..|+.
T Consensus 257 Cngh~s~c~~~~~~~~~C~C~~nt~G~~Ce~ 287 (375)
T 4aqt_A 257 CNGHASECVKNEFDKLMCNCKHNTYGVDCEK 287 (375)
T ss_dssp CTTSCSCEEECTTSCEEECCCTTEESTTSCE
T ss_pred CCCCCcccCCCCCCCeeeeCcCCCcCCCccc
Confidence 55555432 334567899999999999874
No 138
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=84.23 E-value=0.64 Score=40.01 Aligned_cols=31 Identities=19% Similarity=0.426 Sum_probs=26.0
Q ss_pred CCCCCCCeeeeC--CCCc-eeeCCCCCcCCCCCC
Q psy9424 457 APCGPNAQCSVA--NHRP-LCSCPAGLMGLPSAN 487 (535)
Q Consensus 457 ~~C~~~~~C~~~--~g~~-~C~C~~G~~G~~c~~ 487 (535)
.||.|+|+|+.. ...| +|.|++||.|..|++
T Consensus 13 cpC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei 46 (145)
T 2i9a_A 13 CDCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEI 46 (145)
T ss_dssp CCCCTTCEEEECSSSTTCEEEECCTTEESTTSCE
T ss_pred CCCCCCCCcCCCccccCCccccCCCCCCCCceec
Confidence 389999999875 3456 899999999999984
No 139
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=82.91 E-value=0.63 Score=47.42 Aligned_cols=36 Identities=17% Similarity=0.477 Sum_probs=32.7
Q ss_pred cCCCCCCCCCCCCeeccCCCCceecCCC-CCCCCCCC
Q psy9424 143 RPACEGILCGRNALCTASDHHATCSCKP-GYVGHPGP 178 (535)
Q Consensus 143 ~~~C~~~~C~~~g~C~~~~~~~~C~C~~-Gf~g~~c~ 178 (535)
.+.|..+||.++++|++..++|.|.|+. ||.|..|+
T Consensus 185 ~~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~ 221 (410)
T 3asi_A 185 STTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCN 221 (410)
T ss_dssp SSCCCTTSSSTTCEEEECSSSEEEECTTTSEESTTSC
T ss_pred CCCcccccCCCCCEecCCCCCceEeccCCcccCCCCC
Confidence 4688889999999999999999999996 99999986
No 140
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=78.63 E-value=2.1 Score=42.86 Aligned_cols=23 Identities=17% Similarity=0.397 Sum_probs=18.7
Q ss_pred cCCCeeeeCCCCCcCCCCCCCCc
Q psy9424 385 LTHRKVCFCPRGFTGDPETECVR 407 (535)
Q Consensus 385 ~~g~~~C~C~~G~~g~~~~~C~~ 407 (535)
..+.+.|.|+++|.|..|+.|.+
T Consensus 268 ~~~~~~C~C~~nt~G~~Ce~C~~ 290 (375)
T 4aqt_A 268 EFDKLMCNCKHNTYGVDCEKCLP 290 (375)
T ss_dssp TTSCEEECCCTTEESTTSCEECT
T ss_pred CCCCeeeeCcCCCcCCCcccCCC
Confidence 34678999999999999877654
No 141
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=76.70 E-value=0.98 Score=39.16 Aligned_cols=49 Identities=27% Similarity=0.512 Sum_probs=34.4
Q ss_pred CCCccCCCCCCeeCCcCCC---CCCCCCCeeecCCCCeeeeCCCCCccCCCCCCCC
Q psy9424 267 PGYTGDAYFGCHLIDFCAA---KPCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCV 319 (535)
Q Consensus 267 ~G~~G~~~~~C~~~~~C~~---~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C~ 319 (535)
.||.... .+.++++|.. .+|. ..|.+..++|+|.|++||++....++|.
T Consensus 106 ~GF~~~y--~~~d~~eC~~~~~~~C~--~~C~n~~g~~~C~C~~Gy~l~~~~~~C~ 157 (159)
T 1nzi_A 106 TGFAAYY--VATDINECTDFVDVPCS--HFCNNFIGGYFCSCPPEYFLHDDMKNCG 157 (159)
T ss_dssp CEEEEEE--EEEECCTTTC-CCCCSS--SEEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred ccceeee--ecccCcccCCCCCCCCC--CcccCcCCCEEEecCCCcEECCCCCccc
Confidence 4555432 3456788864 2464 4899999999999999999766555443
No 142
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=76.19 E-value=1.6 Score=51.18 Aligned_cols=36 Identities=17% Similarity=0.427 Sum_probs=33.1
Q ss_pred cCCCCCCCCCCCCeeeeCCCCceeeCC-CCCcCCCCC
Q psy9424 451 VDPCSPAPCGPNAQCSVANHRPLCSCP-AGLMGLPSA 486 (535)
Q Consensus 451 ~d~C~~~~C~~~~~C~~~~g~~~C~C~-~G~~G~~c~ 486 (535)
.+.|...||.|+|+|.....+|.|.|+ +||.|..|+
T Consensus 1017 ~~~C~~~pC~ngG~C~~~~~~~~C~C~~~g~~G~~C~ 1053 (1245)
T 3qcw_A 1017 STTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCN 1053 (1245)
T ss_dssp CCCCCTTSSSSSCEEEEETTEEEEECTTSSCBSTTSC
T ss_pred cCceECCcCCCCCEeCCCCCCCEEECCCCCCCCCCcc
Confidence 468889999999999999999999999 699999986
No 143
>1oig_A Dumpy, CG33196-PB; structural protein; NMR {Drosophila melanogaster} SCOP: g.3.18.1
Probab=76.16 E-value=1.4 Score=25.62 Aligned_cols=24 Identities=29% Similarity=0.796 Sum_probs=19.2
Q ss_pred CCCCCCCCCCCCCcccCCCCCCCCC
Q psy9424 497 ECEENRQCKGEGEVCADGRCRPLCS 521 (535)
Q Consensus 497 ~C~~~~~C~~~~~~C~~~~C~~~C~ 521 (535)
||..+.+|. ....|++.+|+++|.
T Consensus 3 EC~~~sdCp-~~~aC~n~kC~dPC~ 26 (26)
T 1oig_A 3 ECVLNSDCP-SNQACVNQKCRDPXX 26 (26)
T ss_dssp SCCSSTTSS-TTCEECSSSEECC--
T ss_pred cccccCcCC-cCHhhhcCcccCCCC
Confidence 777888898 778999999999883
No 144
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=73.45 E-value=1.1 Score=44.57 Aligned_cols=32 Identities=25% Similarity=0.532 Sum_probs=18.5
Q ss_pred CCCCCCCCCCCCCCeeeecCCCceeeCCCCCcCC
Q psy9424 32 RNPCEADEVCGRNAECAVVNHTPRCTCVAGTVGD 65 (535)
Q Consensus 32 ~d~C~~~~~C~~~g~C~~~~~~~~C~C~~Gf~G~ 65 (535)
+|||...+.|++ .|+++.++|+|.|.+||...
T Consensus 1 i~ec~~~~~C~~--~C~n~~g~~~C~C~~g~~l~ 32 (349)
T 3v64_C 1 VNECAEEGYCSQ--GCTNSEGAFQCWCEAGYELR 32 (349)
T ss_dssp --------CCSS--EECCC---CCEECCTTEEEC
T ss_pred CcccCCCCCCcC--eeecCCCCeEEECCCCccCC
Confidence 467764567876 79999999999999999865
No 145
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=73.16 E-value=1.3 Score=38.45 Aligned_cols=43 Identities=21% Similarity=0.328 Sum_probs=31.2
Q ss_pred CCCCCcccCcCCcCCCCCC--CCCCCCCCeeeecCCCceeeCCCCCcCC
Q psy9424 19 PGLASAACVDGRCRNPCEA--DEVCGRNAECAVVNHTPRCTCVAGTVGD 65 (535)
Q Consensus 19 ~g~~g~~C~~~~~~d~C~~--~~~C~~~g~C~~~~~~~~C~C~~Gf~G~ 65 (535)
.||.-...... +|+|.. ...|. ..|++..++|+|.|++||++.
T Consensus 106 ~GF~~~y~~~d--~~eC~~~~~~~C~--~~C~n~~g~~~C~C~~Gy~l~ 150 (159)
T 1nzi_A 106 TGFAAYYVATD--INECTDFVDVPCS--HFCNNFIGGYFCSCPPEYFLH 150 (159)
T ss_dssp CEEEEEEEEEE--CCTTTC-CCCCSS--SEEEEETTEEEEECCTTCEEC
T ss_pred ccceeeeeccc--CcccCCCCCCCCC--CcccCcCCCEEEecCCCcEEC
Confidence 45654443322 789985 24675 479999999999999999965
No 146
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=71.65 E-value=1.8 Score=50.82 Aligned_cols=36 Identities=31% Similarity=0.803 Sum_probs=32.8
Q ss_pred cCCCCCCCCCCCCeeeeCCCCceeeCC-CCCcCCCCC
Q psy9424 451 VDPCSPAPCGPNAQCSVANHRPLCSCP-AGLMGLPSA 486 (535)
Q Consensus 451 ~d~C~~~~C~~~~~C~~~~g~~~C~C~-~G~~G~~c~ 486 (535)
.+.|.++||.++|+|.+...+|.|.|+ +||.|..|+
T Consensus 619 ~~~C~~~pC~ngg~C~~~~~~~~C~C~~~g~~G~~C~ 655 (1245)
T 3qcw_A 619 AKPCLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCE 655 (1245)
T ss_dssp SCGGGSCCCCTTCEEEECSSSEEEECTTTTEESTTSC
T ss_pred CCCCCccCCCCCCEEeCCCCCeEEECCCCCcccccCc
Confidence 467778999999999999999999999 799999986
No 147
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=69.92 E-value=2.5 Score=40.41 Aligned_cols=43 Identities=28% Similarity=0.575 Sum_probs=31.1
Q ss_pred CCcCCCC---CCCCCCeeecCCCCeeeeCCCCCccCCCCCCCCCCCCC
Q psy9424 280 IDFCAAK---PCGPGARCDNSRGSYKCLCPLGLVGDPYGAGCVSASQC 324 (535)
Q Consensus 280 ~~~C~~~---~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~~C~~~~~C 324 (535)
.|||... .|. ..|.++.++|+|.|..||......++|...++|
T Consensus 2 ~~eC~~~~~~~C~--~~C~~~~~~~~C~C~~G~~l~~d~~sC~p~~~c 47 (283)
T 3f1s_B 2 KNECHPERTDGCQ--HFCLPGQESYTCSCAQGYRLGEDHKQCVPHDQC 47 (283)
T ss_dssp -CCCCSSCSSSCS--SBCCCCTTSCCCBCCTTEEECTTSSCEEECSTT
T ss_pred CCccCCCCCCCCC--CEeeCCCCCeEecCCCCcccCCCCCcccccccc
Confidence 3566543 343 478888899999999999887777777766665
No 148
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=66.21 E-value=1.9 Score=41.30 Aligned_cols=50 Identities=16% Similarity=0.373 Sum_probs=35.7
Q ss_pred CCCccCCCCCCCcccCcCCcC-------CCCCC---CCCCCCCCeeeecCCCceeeCCCCCcCC
Q psy9424 12 SQHLQQVPGLASAACVDGRCR-------NPCEA---DEVCGRNAECAVVNHTPRCTCVAGTVGD 65 (535)
Q Consensus 12 ~~~c~c~~g~~g~~C~~~~~~-------d~C~~---~~~C~~~g~C~~~~~~~~C~C~~Gf~G~ 65 (535)
-+.|+|.+||.|++|+=.... ..|.. ...|+++|+|+-. +|+|..+|.+.
T Consensus 206 CG~C~C~~g~~G~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~CG----~C~C~~~~~~~ 265 (280)
T 2p26_A 206 CGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCG----QCLCHTSDVPG 265 (280)
T ss_dssp TTEEEECTTEESTTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEEETT----EEEECCCSSTT
T ss_pred CCceeCCCCCcCCcceecCCccccccccccCCCCCCCCccCCCceEeCC----eeECcCCCCCC
Confidence 356899999999999721101 15752 2359999999854 89999888654
No 149
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=66.20 E-value=14 Score=37.20 Aligned_cols=17 Identities=24% Similarity=0.612 Sum_probs=13.6
Q ss_pred eeeeCCCCCcCCCCCCC
Q psy9424 389 KVCFCPRGFTGDPETEC 405 (535)
Q Consensus 389 ~~C~C~~G~~g~~~~~C 405 (535)
.+|.|..++.|..|+.|
T Consensus 286 g~C~C~hnT~G~~CErC 302 (403)
T 2y38_A 286 LQCACQHNTCGGSCDRC 302 (403)
T ss_dssp EEECCCTTEESSSCCEE
T ss_pred eEeECcCcCcCCCCCCC
Confidence 46999999999986644
No 150
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=65.54 E-value=2.5 Score=41.80 Aligned_cols=28 Identities=32% Similarity=0.789 Sum_probs=17.6
Q ss_pred eeecCCCCeeeeCCCCCccCCCCCCCCC
Q psy9424 293 RCDNSRGSYKCLCPLGLVGDPYGAGCVS 320 (535)
Q Consensus 293 ~C~~~~g~~~C~C~~Gy~g~~c~~~C~~ 320 (535)
.|.+++++|+|.|++||......++|..
T Consensus 13 ~C~n~~g~~~C~C~~g~~l~~d~~~C~~ 40 (349)
T 3v64_C 13 GCTNSEGAFQCWCEAGYELRPDRRSCKA 40 (349)
T ss_dssp EECCC---CCEECCTTEEECTTSSCEEE
T ss_pred eeecCCCCeEEECCCCccCCCCCCcccc
Confidence 6777778888888888876655555643
No 151
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=65.22 E-value=2.8 Score=40.16 Aligned_cols=32 Identities=22% Similarity=0.571 Sum_probs=25.6
Q ss_pred CCCCCCC--CCCCCCCeeeecCCCceeeCCCCCcCC
Q psy9424 32 RNPCEAD--EVCGRNAECAVVNHTPRCTCVAGTVGD 65 (535)
Q Consensus 32 ~d~C~~~--~~C~~~g~C~~~~~~~~C~C~~Gf~G~ 65 (535)
.|||... +.|.+ .|.++.++|+|.|.+||...
T Consensus 2 ~~eC~~~~~~~C~~--~C~~~~~~~~C~C~~G~~l~ 35 (283)
T 3f1s_B 2 KNECHPERTDGCQH--FCLPGQESYTCSCAQGYRLG 35 (283)
T ss_dssp -CCCCSSCSSSCSS--BCCCCTTSCCCBCCTTEEEC
T ss_pred CCccCCCCCCCCCC--EeeCCCCCeEecCCCCcccC
Confidence 5788753 57875 59999999999999999865
No 152
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=57.69 E-value=2.6 Score=45.60 Aligned_cols=44 Identities=23% Similarity=0.338 Sum_probs=36.2
Q ss_pred eCCCCCccCCCCCCeeCCcCCCCCCCCCCeeecCCCCeeeeCCCCCccCCCC
Q psy9424 264 YCQPGYTGDAYFGCHLIDFCAAKPCGPGARCDNSRGSYKCLCPLGLVGDPYG 315 (535)
Q Consensus 264 ~C~~G~~G~~~~~C~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~ 315 (535)
.|.+||+|+ .|.....|. ..|..+|+|++. .|.|.+||+|..|.
T Consensus 521 ~C~~gw~g~---dc~i~~~Cp-~~C~ghG~C~~G----~C~Cd~G~~G~~C~ 564 (725)
T 2e26_A 521 DKQQTWAID---NVYIGDGCL-DMCSGHGRCVQG----SCVCDEQWGGLYCD 564 (725)
T ss_dssp CTTCCEEEE---EEEEESCSS-GGGGGSEEEETT----EEEECTTEESTTSC
T ss_pred ccCCCcccc---cccccCCCC-cccCCCcEECCC----CEeeCCCccCCCcC
Confidence 689999999 565335663 479999999986 89999999998876
No 153
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=55.72 E-value=4 Score=39.11 Aligned_cols=55 Identities=27% Similarity=0.639 Sum_probs=36.6
Q ss_pred CCCCCccccCCCCeeeeCCCCCccCCCCCCeeCC--------cCCCC----CCCCCCeeecCCCCeeeeCCCCCcc
Q psy9424 248 CGPNALCSAEKHKQICYCQPGYTGDAYFGCHLID--------FCAAK----PCGPGARCDNSRGSYKCLCPLGLVG 311 (535)
Q Consensus 248 C~~~~~C~~~~g~~~C~C~~G~~G~~~~~C~~~~--------~C~~~----~C~~~~~C~~~~g~~~C~C~~Gy~g 311 (535)
|..+|++.-. .|.|.+||+|..++ |.... .|... .|..+|+|+-. .|.|..++.+
T Consensus 198 C~g~G~~~CG----~C~C~~g~~G~~Ce-C~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~CG----~C~C~~~~~~ 264 (280)
T 2p26_A 198 CHGKGFLECG----ICRCDTGYIGKNCE-CQTQGRSSQELEGSCRKDNNSIICSGLGDCVCG----QCLCHTSDVP 264 (280)
T ss_dssp GGGSEEEETT----EEEECTTEESTTSC-EECTTSCHHHHHHTTCSSTTSCGGGGSEEEETT----EEEECCCSST
T ss_pred cCCCCeECCC----ceeCCCCCcCCcce-ecCCccccccccccCCCCCCCCccCCCceEeCC----eeECcCCCCC
Confidence 5545555422 58999999999764 54322 57532 48888888765 7999877643
No 154
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=51.51 E-value=22 Score=27.55 Aligned_cols=64 Identities=23% Similarity=0.381 Sum_probs=47.1
Q ss_pred CCCCCCCccccC-CCCeeeeCCCCCccCCCCCCeeCC--cCCCC--CCCCCCeeecCC-CCeeeeCCCCCc
Q psy9424 246 NPCGPNALCSAE-KHKQICYCQPGYTGDAYFGCHLID--FCAAK--PCGPGARCDNSR-GSYKCLCPLGLV 310 (535)
Q Consensus 246 ~~C~~~~~C~~~-~g~~~C~C~~G~~G~~~~~C~~~~--~C~~~--~C~~~~~C~~~~-g~~~C~C~~Gy~ 310 (535)
..|..++.|... .+.-.|+|..+|.-+.. .|...+ .|..+ -|...+.|.... ..-.|.|...+.
T Consensus 10 tkcp~NA~Cyr~~dg~EecRCllnykk~~~-kCV~~~~~~C~~NNGGCd~nA~C~~~~~~kIvC~C~~~~~ 79 (95)
T 1b9w_A 10 TNVPENAACYRYLDGTEEWRCLLYFKEDAG-KCVPAPNMTCKDKNGGCAPEAECKMNDKNEIVCKCTKEGS 79 (95)
T ss_dssp CCCCTTEEEEECTTSCEEEEECTTEEEETT-EEEECTTCCTTTGGGGSCTTSEEEECTTSCEEEECCSTTE
T ss_pred CCCCCCcCeEEEcCCCEEEEEECCeEecCC-EEEcCCCCCccccCCCcCCCcceeecCCCcEEEECCCCCC
Confidence 357788999875 46788999999985433 476533 56553 388889998877 678899988754
No 155
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=51.48 E-value=6.6 Score=40.86 Aligned_cols=30 Identities=27% Similarity=0.667 Sum_probs=25.7
Q ss_pred CCCCCCCCeeeeC-CCCceeeCCCCCcCCCC
Q psy9424 456 PAPCGPNAQCSVA-NHRPLCSCPAGLMGLPS 485 (535)
Q Consensus 456 ~~~C~~~~~C~~~-~g~~~C~C~~G~~G~~c 485 (535)
.++|..++.|+.. .+.|.|.|+.||.|..-
T Consensus 26 ~~~c~~~a~C~~~~~~~~~c~C~~G~ag~G~ 56 (551)
T 3fby_A 26 PSECHEHADCVLERDGSRSCVCAVGWAGNGI 56 (551)
T ss_dssp BCCCCTTEEEEECTTSCEEEEECTTEESSSS
T ss_pred CCCCCCCCeeEeCCCCCEecCCCCCCCCCCc
Confidence 4789999999886 56789999999999763
No 156
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=49.35 E-value=13 Score=28.82 Aligned_cols=32 Identities=19% Similarity=0.248 Sum_probs=24.9
Q ss_pred CCCCCCCCCCCeeccC-CCCceecCCCCCCCCC
Q psy9424 145 ACEGILCGRNALCTAS-DHHATCSCKPGYVGHP 176 (535)
Q Consensus 145 ~C~~~~C~~~g~C~~~-~~~~~C~C~~Gf~g~~ 176 (535)
.|....|+.++.|... .+..+|+|..+|.-..
T Consensus 6 ~C~~tkcp~NA~Cyr~~dg~EecRCllnykk~~ 38 (95)
T 1b9w_A 6 RCIDTNVPENAACYRYLDGTEEWRCLLYFKEDA 38 (95)
T ss_dssp SCSSCCCCTTEEEEECTTSCEEEEECTTEEEET
T ss_pred ccccCCCCCCcCeEEEcCCCEEEEEECCeEecC
Confidence 4444578889999885 4678999999998655
No 157
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=40.37 E-value=12 Score=39.03 Aligned_cols=28 Identities=25% Similarity=0.617 Sum_probs=24.7
Q ss_pred CCCCCCCeeccCC-CCceecCCCCCCCCC
Q psy9424 149 ILCGRNALCTASD-HHATCSCKPGYVGHP 176 (535)
Q Consensus 149 ~~C~~~g~C~~~~-~~~~C~C~~Gf~g~~ 176 (535)
++|..++.|+.+. +.|.|.|+.||.|..
T Consensus 27 ~~c~~~a~C~~~~~~~~~c~C~~G~ag~G 55 (551)
T 3fby_A 27 SECHEHADCVLERDGSRSCVCAVGWAGNG 55 (551)
T ss_dssp CCCCTTEEEEECTTSCEEEEECTTEESSS
T ss_pred CCCCCCCeeEeCCCCCEecCCCCCCCCCC
Confidence 6999999999874 678999999999876
No 158
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=39.03 E-value=6.1 Score=39.39 Aligned_cols=52 Identities=23% Similarity=0.544 Sum_probs=30.7
Q ss_pred ccchhccCCCccCCCCCCCcccCcCCcCCCCCCCCCCCCCCeeeecCCCceeeCCCCCcCC
Q psy9424 5 QVQWQQISQHLQQVPGLASAACVDGRCRNPCEADEVCGRNAECAVVNHTPRCTCVAGTVGD 65 (535)
Q Consensus 5 ~~~~~~~~~~c~c~~g~~g~~C~~~~~~d~C~~~~~C~~~g~C~~~~~~~~C~C~~Gf~G~ 65 (535)
+|.|-+....-.-.+.|.=.+--. ..+|. +.|..||.|+. .+|+|.+||.|.
T Consensus 167 rFRW~Q~~~~~~~~~~WAlD~vyI---g~~Cp--~~CsGhG~C~~----g~C~Cd~G~~g~ 218 (387)
T 2ddu_A 167 RFRWIQESSSQKNVPPFGLDGVYI---SEPCP--SYCSGHGDCIS----GVCFCDLGYTAA 218 (387)
T ss_dssp EEEEECC------CCCCBCCCCEE---ESCCG--GGGGGSEEEET----TEEEECTTEEEE
T ss_pred eEEEEcccCCcccCcceeEeeEEe---cccCc--cccCCCceecC----CeEEecCCcccC
Confidence 455655544333344555333333 23454 57889999975 389999999986
No 159
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=33.32 E-value=28 Score=33.56 Aligned_cols=32 Identities=25% Similarity=0.542 Sum_probs=22.9
Q ss_pred CCCCCC-CCCCCCCCeeeecCC--CceeeCCCCCcCC
Q psy9424 32 RNPCEA-DEVCGRNAECAVVNH--TPRCTCVAGTVGD 65 (535)
Q Consensus 32 ~d~C~~-~~~C~~~g~C~~~~~--~~~C~C~~Gf~G~ 65 (535)
.++|.. .+.|++ .|....+ +|+|.|+.||+..
T Consensus 267 ~n~C~~~ng~Cs~--~C~~~~~~~~~~C~C~~g~~l~ 301 (318)
T 3sov_A 267 TNPCGIDNGGCSH--LCLMSPVKPFYQCACPTGVKLL 301 (318)
T ss_dssp CCTTTTTGGGCSS--EEEECSSTTSEEEECSTTCCBC
T ss_pred ccccccCCCCcce--EEecCCCCCCeEEECCCCCEEC
Confidence 456653 345654 6887654 7899999999876
No 160
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=27.71 E-value=25 Score=36.86 Aligned_cols=58 Identities=17% Similarity=0.386 Sum_probs=38.1
Q ss_pred cccccchhccCCCccCCCCCC--CcccCcCCcCCCCCC--CCCCCCCCeee--------ecCCCceeeCCCCCcCC
Q psy9424 2 CREQVQWQQISQHLQQVPGLA--SAACVDGRCRNPCEA--DEVCGRNAECA--------VVNHTPRCTCVAGTVGD 65 (535)
Q Consensus 2 ~~~~~~~~~~~~~c~c~~g~~--g~~C~~~~~~d~C~~--~~~C~~~g~C~--------~~~~~~~C~C~~Gf~G~ 65 (535)
|.-..+|-...+.|.|.+||. +..|+ .|.. ..+....+.|. ...+++.|+|..||.-.
T Consensus 252 C~~dG~w~~p~G~C~C~~G~e~~~~~C~------aC~~g~~k~~~~~~~C~~CP~~S~s~~~Gs~~C~C~ng~~ra 321 (536)
T 3fl7_A 252 CAVDGEWLVPIGQCLCQAGYEKVEDACQ------ACSPGFFKFEASESPCLECPEHTLPSPEGATSCECEEGFFRA 321 (536)
T ss_dssp ECTTSCBCCCBCCCEECTTEEEETTEEE------ECCTTEECCSCCSSCCEECCSSEECCCTTCSSCEECTTCBCC
T ss_pred EcCCCCEecccCcEeccCccccCCceee------ecCCCCCcccCCCCccccCCCCCCCCCCCccEEEEecccccc
Confidence 555678999999999999997 44454 2432 11222233343 24578899999999755
No 161
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=26.66 E-value=48 Score=31.87 Aligned_cols=28 Identities=32% Similarity=0.566 Sum_probs=22.1
Q ss_pred eeecCCC--CeeeeCCCCCccCCCCCCCCC
Q psy9424 293 RCDNSRG--SYKCLCPLGLVGDPYGAGCVS 320 (535)
Q Consensus 293 ~C~~~~g--~~~C~C~~Gy~g~~c~~~C~~ 320 (535)
.|...++ +|+|.|+.||......++|.+
T Consensus 280 ~C~~~~~~~~~~C~C~~g~~l~~d~~~c~~ 309 (318)
T 3sov_A 280 LCLMSPVKPFYQCACPTGVKLLENGKTCKD 309 (318)
T ss_dssp EEEECSSTTSEEEECSTTCCBCTTSSCBCC
T ss_pred EEecCCCCCCeEEECCCCCEECCCCCCCCC
Confidence 6877765 799999999998876666654
No 162
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=26.46 E-value=17 Score=38.29 Aligned_cols=18 Identities=22% Similarity=0.639 Sum_probs=14.0
Q ss_pred eCCCCceeeCCCCCcCCC
Q psy9424 467 VANHRPLCSCPAGLMGLP 484 (535)
Q Consensus 467 ~~~g~~~C~C~~G~~G~~ 484 (535)
...|+|.|.|..||.-..
T Consensus 305 ~~~Gs~~C~C~ng~~ra~ 322 (536)
T 3fl7_A 305 SPEGATSCECEEGFFRAP 322 (536)
T ss_dssp CCTTCSSCEECTTCBCCT
T ss_pred CCCCccEEEEeccccccC
Confidence 346889999999987544
No 163
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=24.49 E-value=38 Score=38.09 Aligned_cols=39 Identities=31% Similarity=0.668 Sum_probs=32.3
Q ss_pred CCCCCCCCCCCCeeeeCCCCceeeCCCCCcCCCCCCCcc
Q psy9424 452 DPCSPAPCGPNAQCSVANHRPLCSCPAGLMGLPSANTAC 490 (535)
Q Consensus 452 d~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~~~~C 490 (535)
+.|.-.||.+++.++.......|+|++||.|..|+...+
T Consensus 498 ~~c~C~PC~ngg~~~l~g~~C~C~C~~g~~G~~Ce~~~~ 536 (913)
T 3t5o_A 498 DPCQCAPCPNNGRPTLSGTECLCVCQSGTYGENCEKQSP 536 (913)
T ss_dssp CGGGSCCBTTTBEEEEETTEEEEECCTTBCSTTSCCBCS
T ss_pred ccccCCCCCCCCEeecCCCceEEEccCCccccCccCccc
Confidence 555545899999999888888999999999999985444
No 164
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=22.40 E-value=37 Score=36.37 Aligned_cols=32 Identities=25% Similarity=0.459 Sum_probs=26.0
Q ss_pred CCCCCC-CCCCCCCCeeeecC-CCceeeCCCCCcCC
Q psy9424 32 RNPCEA-DEVCGRNAECAVVN-HTPRCTCVAGTVGD 65 (535)
Q Consensus 32 ~d~C~~-~~~C~~~g~C~~~~-~~~~C~C~~Gf~G~ 65 (535)
+|+|.. .+.|++ .|.+.. ++|+|.|++||...
T Consensus 265 ~n~C~~~ng~C~~--~C~~~~~~~~~C~C~~g~~l~ 298 (628)
T 4a0p_A 265 WNECASSNGHCSH--LCLAVPVGGFVCGCPAHYSLN 298 (628)
T ss_dssp CCTTTTTGGGCSS--EEEEETTTEEEEECSTTCEEC
T ss_pred ceEeccCCCCcch--hhhcCCCCCeeEEcCCCcEec
Confidence 778875 356764 799988 89999999999875
No 165
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=20.84 E-value=61 Score=30.90 Aligned_cols=26 Identities=23% Similarity=0.568 Sum_probs=20.3
Q ss_pred eeecCC------CCeeeeCCCCCccCCCCCCC
Q psy9424 293 RCDNSR------GSYKCLCPLGLVGDPYGAGC 318 (535)
Q Consensus 293 ~C~~~~------g~~~C~C~~Gy~g~~c~~~C 318 (535)
.|...+ ++|+|.|+.||......++|
T Consensus 283 ~C~~~p~~~~~~~~~~C~C~~g~~l~~d~~~C 314 (316)
T 1ijq_A 283 LCLPAPQINPHSPKFTCACPDGMLLARDMRSC 314 (316)
T ss_dssp EEEECCCCSTTCCSEEEECCTTCEECTTSSCE
T ss_pred ccCCCccccCCCCCeEeeCCCCCEECCCCCcc
Confidence 787664 58999999999987665544
No 166
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=20.76 E-value=46 Score=35.61 Aligned_cols=39 Identities=23% Similarity=0.542 Sum_probs=27.7
Q ss_pred CCcCCCC--CCCCCCeeecCC-CCeeeeCCCCCccCCCCCCCCC
Q psy9424 280 IDFCAAK--PCGPGARCDNSR-GSYKCLCPLGLVGDPYGAGCVS 320 (535)
Q Consensus 280 ~~~C~~~--~C~~~~~C~~~~-g~~~C~C~~Gy~g~~c~~~C~~ 320 (535)
+++|+.. .|. ..|.+.+ ++|+|.|++||......++|..
T Consensus 265 ~n~C~~~ng~C~--~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~ 306 (628)
T 4a0p_A 265 WNECASSNGHCS--HLCLAVPVGGFVCGCPAHYSLNADNRTCSA 306 (628)
T ss_dssp CCTTTTTGGGCS--SEEEEETTTEEEEECSTTCEECTTSSCEEC
T ss_pred ceEeccCCCCcc--hhhhcCCCCCeeEEcCCCcEecccCCcCcc
Confidence 4566542 243 3788888 8999999999988766666654
Done!