Query psy9427
Match_columns 324
No_of_seqs 289 out of 2381
Neff 8.5
Searched_HMMs 29240
Date Fri Aug 16 19:05:00 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9427.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9427hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1z1y_A Ookinete surface protei 99.9 4.4E-23 1.5E-27 175.9 4.3 147 17-218 8-171 (186)
2 2vj3_A Neurogenic locus notch 99.8 4.1E-19 1.4E-23 143.4 12.8 122 13-173 4-129 (135)
3 2vj3_A Neurogenic locus notch 99.8 1.7E-18 5.7E-23 139.8 12.0 119 77-235 5-126 (135)
4 4d90_A EGF-like repeat and dis 99.7 7.9E-18 2.7E-22 137.0 10.0 120 15-158 1-131 (143)
5 2bou_A EGF-like module contain 99.7 8.9E-18 3.1E-22 136.8 8.3 119 20-168 7-142 (143)
6 2bou_A EGF-like module contain 99.7 1.9E-17 6.3E-22 134.9 6.9 118 83-228 7-138 (143)
7 4d90_A EGF-like repeat and dis 99.7 6.1E-17 2.1E-21 131.7 9.4 107 78-218 1-129 (143)
8 1yo8_A Thrombospondin-2; EGF, 99.7 2.7E-16 9.2E-21 155.2 12.2 132 77-240 3-161 (634)
9 1uzk_A Fibrillin-1; glycoprote 99.7 4.2E-18 1.4E-22 141.7 -0.9 139 13-217 2-154 (162)
10 1yo8_A Thrombospondin-2; EGF, 99.7 3.2E-16 1.1E-20 154.7 11.6 133 14-176 3-161 (634)
11 4fbr_A Lectin, myxobacterial h 99.6 8.9E-20 3E-24 161.3 -17.7 179 20-217 38-264 (267)
12 1z1y_A Ookinete surface protei 99.6 2.7E-16 9.1E-21 133.7 4.4 118 12-159 40-174 (186)
13 1dx5_I Thrombomodulin; serine 99.6 1.1E-15 3.7E-20 120.3 3.3 110 13-158 3-113 (118)
14 1dx5_I Thrombomodulin; serine 99.5 2.9E-15 9.8E-20 117.9 1.2 106 77-217 4-110 (118)
15 2ygq_A WIF-1, WNT inhibitory f 99.5 2.8E-14 9.5E-19 131.4 7.2 147 16-217 150-303 (324)
16 2w86_A Fibrillin-1, fibrillin1 99.4 3.2E-15 1.1E-19 122.2 -1.9 114 77-217 4-139 (147)
17 2w86_A Fibrillin-1, fibrillin1 99.4 1.4E-14 4.7E-19 118.4 -0.9 132 13-162 3-146 (147)
18 3fcs_B Integrin beta-3; beta p 99.4 9.5E-13 3.2E-17 131.7 12.1 190 13-278 433-637 (690)
19 2vj2_A Jagged-1; signalling, p 99.4 1.4E-13 4.7E-18 115.1 3.5 90 84-217 71-164 (169)
20 1emn_A Fibrillin; extracellula 99.3 1.6E-12 5.5E-17 95.3 6.5 73 77-158 5-78 (82)
21 4fbr_A Lectin, myxobacterial h 99.3 8.2E-16 2.8E-20 135.9 -15.3 176 27-239 5-213 (267)
22 2vj2_A Jagged-1; signalling, p 99.3 1.4E-12 4.8E-17 109.0 4.8 130 10-158 27-167 (169)
23 1lmj_A Fibrillin 1; EGF, calci 99.3 2.1E-12 7E-17 95.6 4.2 79 77-162 3-85 (86)
24 1emn_A Fibrillin; extracellula 99.3 4.9E-12 1.7E-16 92.7 5.2 74 116-217 2-75 (82)
25 1aut_L Activated protein C; se 99.2 2E-11 6.9E-16 95.1 7.4 93 14-137 6-108 (114)
26 1z6c_A Vitamin K-dependent pro 99.2 5E-12 1.7E-16 93.7 3.1 80 77-165 3-86 (87)
27 1lmj_A Fibrillin 1; EGF, calci 99.2 1.5E-11 5.1E-16 90.9 5.1 74 13-111 2-81 (86)
28 1tpg_A T-plasminogen activator 99.2 1.4E-11 4.7E-16 92.1 4.9 79 34-157 1-83 (91)
29 3fcs_B Integrin beta-3; beta p 99.2 3.3E-11 1.1E-15 120.6 8.2 159 79-284 436-616 (690)
30 1aut_L Activated protein C; se 99.2 2.9E-11 9.8E-16 94.3 5.7 79 77-165 6-95 (114)
31 1x7a_L Coagulation factor IX, 99.2 2.3E-11 7.7E-16 99.1 5.2 81 77-168 48-130 (146)
32 2ygq_A WIF-1, WNT inhibitory f 99.1 8E-11 2.7E-15 108.2 8.4 143 78-284 149-291 (324)
33 1x7a_L Coagulation factor IX, 99.1 6.8E-11 2.3E-15 96.2 6.9 86 8-123 42-130 (146)
34 1tpg_A T-plasminogen activator 99.1 4.3E-11 1.5E-15 89.4 4.7 77 97-217 1-81 (91)
35 1uzk_A Fibrillin-1; glycoprote 99.1 5.1E-12 1.8E-16 104.7 -2.4 112 77-235 3-127 (162)
36 2w2n_E LDL receptor, low-densi 99.1 3.3E-11 1.1E-15 92.8 2.2 76 77-162 29-106 (107)
37 2c4f_L Coagulation factor VII 99.1 7.6E-11 2.6E-15 95.5 4.5 82 77-167 47-132 (142)
38 1z6c_A Vitamin K-dependent pro 99.1 5.2E-11 1.8E-15 88.1 3.0 70 13-108 2-76 (87)
39 2c4f_L Coagulation factor VII 99.0 2.8E-10 9.4E-15 92.2 5.6 84 12-122 45-132 (142)
40 1nfu_B Coagulation factor XA, 99.0 1E-10 3.6E-15 99.3 2.7 92 8-132 36-130 (195)
41 2vh0_B Activated factor XA lig 99.0 1.2E-10 4.3E-15 93.3 2.7 90 8-130 36-128 (134)
42 2vh0_B Activated factor XA lig 99.0 9.6E-11 3.3E-15 93.9 0.9 80 77-166 42-123 (134)
43 3h5c_B Vitamin K-dependent pro 99.0 7.1E-10 2.4E-14 101.6 6.6 82 77-169 5-89 (317)
44 1nfu_B Coagulation factor XA, 98.9 1.7E-10 5.7E-15 98.1 0.9 79 77-165 42-122 (195)
45 2w2n_E LDL receptor, low-densi 98.9 5.1E-10 1.7E-14 86.1 1.9 71 14-111 29-102 (107)
46 3h5c_B Vitamin K-dependent pro 98.8 4.3E-09 1.5E-13 96.3 7.1 80 14-123 5-88 (317)
47 3k6s_B Integrin beta-2; cell r 98.8 5.2E-09 1.8E-13 104.5 8.0 140 20-219 435-589 (687)
48 2gy5_A Angiopoietin-1 receptor 98.8 1.8E-08 6.3E-13 95.7 9.4 102 84-217 204-315 (423)
49 3p5b_L Low density lipoprotein 98.8 8.7E-09 3E-13 97.4 6.9 81 78-166 1-81 (400)
50 1n7d_A LDL receptor, low-densi 98.6 1.3E-07 4.5E-12 95.6 11.1 100 84-217 262-364 (699)
51 3p5b_L Low density lipoprotein 98.6 5.6E-08 1.9E-12 91.8 6.5 79 15-119 1-80 (400)
52 2gy5_A Angiopoietin-1 receptor 98.6 1.9E-07 6.5E-12 88.7 9.8 108 21-159 204-319 (423)
53 3v65_B Low-density lipoprotein 98.5 1.2E-08 4.2E-13 95.8 1.1 82 77-165 3-84 (386)
54 1n7d_A LDL receptor, low-densi 98.5 2.2E-07 7.5E-12 94.0 9.1 82 77-166 294-375 (699)
55 3k6s_B Integrin beta-2; cell r 98.4 2E-07 6.8E-12 93.2 6.7 152 81-283 433-607 (687)
56 3m0c_C LDL receptor, low-densi 98.4 3.3E-07 1.1E-11 93.7 8.4 72 89-168 324-395 (791)
57 3v65_B Low-density lipoprotein 98.3 2E-07 6.8E-12 87.5 2.7 71 121-217 4-74 (386)
58 1oig_A Dumpy, CG33196-PB; stru 98.3 3E-07 1E-11 50.3 1.7 26 294-319 1-26 (26)
59 1edm_B Factor IX; epidermal gr 98.1 2.6E-06 8.8E-11 52.6 3.9 32 77-108 3-34 (39)
60 1edm_B Factor IX; epidermal gr 98.1 3.1E-06 1.1E-10 52.2 4.2 33 14-47 3-35 (39)
61 3m0c_C LDL receptor, low-densi 98.0 3.7E-06 1.3E-10 86.0 5.5 80 17-123 310-395 (791)
62 2p28_B Integrin beta-2; hybrid 97.9 8.1E-06 2.8E-10 70.3 4.8 106 20-158 96-212 (217)
63 3u7u_G Neuregulin 1; signaling 97.9 7.1E-06 2.4E-10 54.6 3.2 38 77-119 8-50 (55)
64 3u7u_G Neuregulin 1; signaling 97.9 1.4E-05 4.8E-10 53.1 4.6 35 12-47 6-45 (55)
65 1egf_A Epidermal growth factor 97.8 3.1E-05 1.1E-09 51.1 5.3 38 77-119 3-45 (53)
66 2k2s_B Micronemal protein 6; m 97.8 2.7E-06 9.3E-11 57.9 -0.1 41 77-123 11-54 (61)
67 1a3p_A Epidermal growth factor 97.7 2.7E-05 9.1E-10 49.6 3.9 36 79-119 2-42 (45)
68 2k2s_B Micronemal protein 6; m 97.7 8.3E-06 2.8E-10 55.5 1.5 37 10-47 7-46 (61)
69 1egf_A Epidermal growth factor 97.6 5E-05 1.7E-09 50.1 3.8 34 13-47 2-40 (53)
70 1hae_A Heregulin-alpha; growth 97.6 2.7E-05 9.4E-10 53.3 2.2 41 78-123 7-52 (63)
71 1a3p_A Epidermal growth factor 97.5 0.0001 3.5E-09 46.8 4.4 31 16-47 2-37 (45)
72 2p28_B Integrin beta-2; hybrid 97.5 5.2E-05 1.8E-09 65.3 3.2 93 83-217 96-209 (217)
73 2jkh_L Factor X light chain; p 97.5 7.5E-05 2.6E-09 49.6 3.1 42 78-123 2-45 (55)
74 4aqs_A Laminin subunit beta-1; 97.4 0.00011 3.6E-09 71.8 5.0 99 97-217 417-520 (525)
75 2jkh_L Factor X light chain; p 97.3 7.1E-05 2.4E-09 49.8 1.7 44 121-169 2-46 (55)
76 1ob1_C Major merozoite surface 97.3 0.00025 8.7E-09 52.4 4.5 67 82-154 9-83 (99)
77 1k36_A Epiregulin; EGF-like fo 97.3 0.00013 4.5E-09 46.5 2.4 36 77-118 3-43 (46)
78 1apq_A Complement protease C1R 97.2 0.00021 7.3E-09 46.8 3.5 32 127-163 20-51 (53)
79 1hae_A Heregulin-alpha; growth 97.2 0.00012 4.1E-09 50.0 2.0 32 15-47 7-43 (63)
80 1n1i_A Merozoite surface prote 97.2 0.0007 2.4E-08 50.4 6.1 65 83-154 16-84 (105)
81 1k36_A Epiregulin; EGF-like fo 97.2 0.00026 8.9E-09 45.1 3.1 32 14-47 3-39 (46)
82 3ca7_A Protein spitz; argos, E 97.1 6.2E-05 2.1E-09 49.4 -0.3 31 83-118 14-48 (52)
83 1apq_A Complement protease C1R 97.1 0.00036 1.2E-08 45.7 3.4 32 83-117 20-51 (53)
84 2kl7_A Fibulin-4; secreted, ca 97.1 0.00039 1.3E-08 48.7 3.5 25 193-217 12-37 (71)
85 1klo_A Laminin; glycoprotein; 97.0 0.00068 2.3E-08 55.5 5.1 33 21-54 2-37 (162)
86 1kli_L Factor VIIA; extrinsic 97.0 0.00025 8.6E-09 49.4 1.8 45 118-168 4-50 (69)
87 1kli_L Factor VIIA; extrinsic 97.0 0.0005 1.7E-08 47.8 3.1 43 77-123 5-50 (69)
88 1n1i_A Merozoite surface prote 96.9 0.0034 1.2E-07 46.7 7.4 68 16-107 12-84 (105)
89 1ob1_C Major merozoite surface 96.9 0.0015 5.1E-08 48.3 5.4 69 17-107 7-83 (99)
90 2kl7_A Fibulin-4; secreted, ca 96.9 0.00073 2.5E-08 47.3 3.6 33 14-47 3-38 (71)
91 2wg3_C Hedgehog-interacting pr 96.8 0.00016 5.4E-09 69.5 -0.3 62 77-158 392-453 (463)
92 1kig_L Factor XA; glycoprotein 96.8 0.00047 1.6E-08 44.9 2.1 33 89-123 10-42 (51)
93 4aqs_A Laminin subunit beta-1; 96.8 0.00045 1.5E-08 67.3 2.6 55 97-158 459-523 (525)
94 1g1s_A P-selectin; selectin, l 96.8 0.00047 1.6E-08 56.1 2.1 41 77-123 119-159 (162)
95 1kig_L Factor XA; glycoprotein 96.6 0.0006 2.1E-08 44.4 1.4 34 132-168 9-42 (51)
96 1nql_B Epidermal growth factor 96.6 0.0014 4.7E-08 43.1 3.1 29 19-48 11-41 (53)
97 1gl4_A Nidogen-1, entactin; im 96.5 0.00057 2E-08 60.7 1.1 42 77-122 5-48 (285)
98 2bz6_L Blood coagulation facto 96.5 0.0009 3.1E-08 43.9 1.7 34 132-168 10-44 (53)
99 2bz6_L Blood coagulation facto 96.5 0.0016 5.4E-08 42.7 2.9 33 89-123 11-44 (53)
100 1gl4_A Nidogen-1, entactin; im 96.4 0.00061 2.1E-08 60.5 0.3 45 118-168 4-49 (285)
101 1klo_A Laminin; glycoprotein; 96.3 0.0044 1.5E-07 50.6 4.8 25 84-108 2-29 (162)
102 1nql_B Epidermal growth factor 96.3 0.0014 4.8E-08 43.0 1.5 33 82-119 11-45 (53)
103 2wg3_C Hedgehog-interacting pr 96.2 0.0016 5.5E-08 62.4 2.3 59 21-119 398-456 (463)
104 2wph_E Coagulation factor IXA 96.1 0.0052 1.8E-07 41.2 3.7 41 89-137 11-52 (59)
105 3ca7_A Protein spitz; argos, E 96.0 0.0042 1.4E-07 40.5 2.8 27 20-47 14-44 (52)
106 3zyj_B Netrin-G1; cell adhesio 96.0 0.0048 1.7E-07 57.9 4.2 97 22-137 299-409 (426)
107 1g1s_A P-selectin; selectin, l 95.9 0.0045 1.5E-07 50.1 3.1 36 15-54 120-155 (162)
108 1oig_A Dumpy, CG33196-PB; stru 95.2 0.01 3.5E-07 32.4 2.0 23 232-255 3-25 (26)
109 3ltf_D Protein spitz; receptor 94.9 0.016 5.6E-07 38.6 2.8 27 21-48 15-45 (58)
110 2wph_E Coagulation factor IXA 94.8 0.014 4.8E-07 39.0 2.3 32 132-166 10-42 (59)
111 2fd6_A Urokinase-type plasmino 94.8 0.033 1.1E-06 43.1 4.6 56 84-157 2-60 (122)
112 3ltf_D Protein spitz; receptor 94.7 0.013 4.3E-07 39.1 1.7 31 84-119 15-49 (58)
113 3nt1_A Prostaglandin-endoperox 94.6 0.025 8.4E-07 55.5 4.4 35 14-49 1-37 (587)
114 1q4g_A Prostaglandin G/H synth 94.6 0.019 6.5E-07 56.0 3.6 35 14-49 2-38 (553)
115 3zyj_B Netrin-G1; cell adhesio 94.3 0.024 8.3E-07 53.2 3.5 81 129-217 299-393 (426)
116 3cfw_A L-selectin; EGF, cell a 94.1 0.028 9.6E-07 45.4 3.0 41 77-123 119-159 (164)
117 1szb_A Mannose binding lectin- 94.1 0.018 6E-07 47.1 1.7 51 104-164 113-167 (170)
118 1q4g_A Prostaglandin G/H synth 94.0 0.025 8.4E-07 55.2 2.9 37 77-118 2-40 (553)
119 2fd6_A Urokinase-type plasmino 93.6 0.1 3.5E-06 40.2 5.4 26 21-47 2-30 (122)
120 3nt1_A Prostaglandin-endoperox 93.5 0.039 1.4E-06 54.1 3.3 37 77-118 1-39 (587)
121 3cfw_A L-selectin; EGF, cell a 92.4 0.065 2.2E-06 43.2 2.6 26 193-218 126-151 (164)
122 1szb_A Mannose binding lectin- 91.2 0.13 4.3E-06 41.9 3.1 40 77-119 124-168 (170)
123 1nzi_A Complement C1S componen 91.0 0.13 4.4E-06 41.2 2.9 43 115-163 113-157 (159)
124 1g1t_A E-selectin; EGF, adhesi 90.8 0.069 2.4E-06 42.6 1.1 37 77-118 119-155 (157)
125 1b9w_A Protein (merozoite surf 89.1 0.75 2.6E-05 33.2 5.2 69 80-154 7-79 (95)
126 1xdt_R Hbegf, heparin-binding 88.6 0.32 1.1E-05 34.3 3.0 34 13-48 36-74 (79)
127 3v64_C Agrin; beta propeller, 88.3 0.16 5.5E-06 46.2 1.7 41 121-166 2-42 (349)
128 3e50_C Protransforming growth 88.0 0.37 1.3E-05 30.8 2.8 24 193-217 15-40 (50)
129 3asi_A Neurexin-1-alpha; beta- 87.6 0.51 1.7E-05 43.9 4.7 32 15-47 186-218 (410)
130 3e50_C Protransforming growth 87.1 0.5 1.7E-05 30.2 3.0 31 83-119 14-46 (50)
131 2ygo_A WIF-1, WNT inhibitory f 86.7 0.4 1.4E-05 39.6 3.0 26 189-217 150-175 (188)
132 1xdt_R Hbegf, heparin-binding 86.6 0.28 9.5E-06 34.6 1.7 36 77-118 37-77 (79)
133 2rnl_A Amphiregulin; AR, color 86.1 0.56 1.9E-05 30.0 2.8 24 193-217 19-44 (50)
134 2rnl_A Amphiregulin; AR, color 85.7 0.68 2.3E-05 29.6 3.1 29 83-117 18-48 (50)
135 1iox_A Betacellulin; EGF-like 85.7 0.58 2E-05 29.9 2.7 31 127-159 14-44 (50)
136 3v64_C Agrin; beta propeller, 85.3 0.38 1.3E-05 43.7 2.5 40 77-119 1-41 (349)
137 1nzi_A Complement C1S componen 85.2 0.71 2.4E-05 36.7 3.8 20 198-217 130-149 (159)
138 1iox_A Betacellulin; EGF-like 84.9 0.48 1.6E-05 30.3 2.1 31 83-119 14-46 (50)
139 3asi_A Neurexin-1-alpha; beta- 84.9 0.64 2.2E-05 43.2 3.9 37 77-118 185-222 (410)
140 2i9a_A Urokinase-type plasmino 84.4 1.2 4.1E-05 35.3 4.7 31 84-119 14-47 (145)
141 3f1s_B Vitamin K-dependent pro 83.8 0.72 2.5E-05 40.6 3.5 43 77-123 2-47 (283)
142 1g1t_A E-selectin; EGF, adhesi 82.9 0.35 1.2E-05 38.3 1.0 25 193-217 126-150 (157)
143 3f1s_B Vitamin K-dependent pro 82.7 0.58 2E-05 41.1 2.4 44 121-169 3-48 (283)
144 1b9w_A Protein (merozoite surf 82.3 4.6 0.00016 29.1 6.5 70 16-107 6-79 (95)
145 2i9a_A Urokinase-type plasmino 76.3 2.4 8.1E-05 33.5 3.8 26 21-47 14-42 (145)
146 3qcw_A Neurexin-1-alpha; synap 73.1 2.3 8E-05 45.4 4.0 32 15-47 1018-1050(1245)
147 3qcw_A Neurexin-1-alpha; synap 70.8 2.6 8.8E-05 45.1 3.7 38 77-119 1017-1055(1245)
148 2ygo_A WIF-1, WNT inhibitory f 66.4 4.1 0.00014 33.5 3.2 32 78-118 149-180 (188)
149 3fby_A COMP, cartilage oligome 63.7 4.8 0.00017 38.7 3.6 29 20-49 27-56 (551)
150 3fby_A COMP, cartilage oligome 59.9 5.2 0.00018 38.4 3.0 31 126-158 26-56 (551)
151 3sov_A LRP-6, low-density lipo 55.9 9.7 0.00033 33.8 4.1 32 132-166 278-311 (318)
152 3sov_A LRP-6, low-density lipo 54.8 10 0.00034 33.6 4.0 29 89-118 279-309 (318)
153 1ijq_A LDL receptor, low-densi 53.4 9.7 0.00033 33.5 3.6 38 77-117 267-315 (316)
154 1ijq_A LDL receptor, low-densi 48.5 12 0.00041 32.9 3.4 28 132-162 281-314 (316)
155 4a0p_A LRP6, LRP-6, low-densit 48.1 9.1 0.00031 37.6 2.7 39 77-118 265-306 (628)
156 4a0p_A LRP6, LRP-6, low-densit 46.3 11 0.00036 37.2 2.9 40 121-165 266-307 (628)
157 1lr7_A Follistatin, FS1; hepar 44.8 20 0.00068 24.3 3.4 28 14-41 1-29 (74)
158 3ngg_A Omwaprin-A; venom prote 41.2 15 0.0005 23.1 2.0 28 290-317 15-46 (50)
159 2e26_A Reelin, reeler protein; 36.5 8.6 0.00029 38.3 0.5 44 101-159 521-564 (725)
160 3s94_A LRP-6, low-density lipo 36.4 14 0.00046 36.3 1.9 28 89-117 590-617 (619)
161 2fyj_A Low-density lipoprotein 35.6 36 0.0012 23.7 3.5 22 243-264 9-33 (82)
162 2a05_A Cysteine-rich secretory 35.3 14 0.00047 24.1 1.1 15 306-320 7-21 (57)
163 3sek_C Follistatin-related pro 34.3 24 0.00081 29.5 2.8 31 12-42 59-89 (209)
164 3s94_A LRP-6, low-density lipo 31.9 17 0.00057 35.6 1.7 29 132-163 589-617 (619)
165 1h9h_I EETI-II, trypsin inhibi 26.0 26 0.0009 20.1 1.1 23 295-317 7-30 (36)
166 4aqt_A Laminin subunit gamma-1 25.4 88 0.003 28.5 5.2 32 22-54 257-290 (375)
167 2l1q_A Liver-expressed antimic 23.6 22 0.00074 21.1 0.5 18 296-314 16-33 (40)
168 1rju_V Metallothionein; Cu(I)- 22.9 60 0.0021 18.0 2.2 12 293-304 22-33 (36)
169 3hh2_C Follistatin; protein-pr 22.3 65 0.0022 28.3 3.5 30 12-41 61-91 (288)
170 3b4v_C Follistatin-like 3; lig 21.9 53 0.0018 27.9 2.8 29 13-41 69-97 (237)
171 1mct_I Trypsin inhibitor A; co 21.5 33 0.0011 18.7 0.9 20 295-314 8-27 (28)
172 1udk_A Nawaprin; antiparallel 21.5 43 0.0015 20.9 1.6 21 291-311 18-38 (51)
No 1
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.87 E-value=4.4e-23 Score=175.90 Aligned_cols=147 Identities=24% Similarity=0.519 Sum_probs=122.1
Q ss_pred CCCCCCCCCCEeeeCCCceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCCCC----CCCCCCCCEEe
Q psy9427 17 CDGVSCGVNAVCVVNNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACD----SGACGTNAVCI 92 (324)
Q Consensus 17 C~~~~C~~~~~C~~~~~~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~----~~~C~~~~~C~ 92 (324)
...+||.+ ++|+++.++|+|.|++| |+|.+...|.+ |++|. ..+|.++++|+
T Consensus 8 ~~~~pC~n-g~C~~~~g~~~C~C~~G-~~g~~~~~C~~----------------------id~C~~~~~~~~C~~~~~C~ 63 (186)
T 1z1y_A 8 TVDTICXN-GQLVQMSNHFXCMCNEG-LVHLSENTCEE----------------------XNECXXETLGXACGEFGQCI 63 (186)
T ss_dssp CTTCCCBT-EEEEECSSCEEEEECTT-EEEEETTEEEE----------------------CCCCSGGGTTSEEETTEEEE
T ss_pred CCCCCCCC-CEeECCCCCeEeECCCC-CccCCCCccCC----------------------CCcccCCCCCCCCCCCCEee
Confidence 45678984 59999999999999999 98865456766 78887 67899999999
Q ss_pred eCC-----CCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeee----cCCCCCCCeeeeCCCCCccCC-CCCCC
Q psy9427 93 PED-----HRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCE----DTGATNGKVVCSCPELSVGDP-YKTGC 162 (324)
Q Consensus 93 ~~~-----~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~----~~~~~~g~~~C~C~~G~~g~~-~~~~C 162 (324)
++. ++|+|.|++||+|+. ..|+ + ++| ..++|.++++|+ + +.++|+|+|++||+|.. ....|
T Consensus 64 ~~~~~~~~g~y~C~C~~G~~g~~---~~C~-~-d~C-~~~~C~~~g~C~~~~~~---~~g~~~C~C~~Gy~g~~~~~~~C 134 (186)
T 1z1y_A 64 ENPDPAQVNMYXCGCIEGYTLXE---DTCV-L-DVC-QYXNCGESGECIVEYLS---EIQSAGCSCAIGXVPNPEDEXXC 134 (186)
T ss_dssp ECSSTTSSCSEEEEECTTEEEET---TEEE-E-GGG-TTCCCCTTEEEEEEEET---TEEEEEEEECTEEEEETTTTTEE
T ss_pred cCCCCcCCCCEECCCCCCCccCC---CCCC-C-CcC-cCCCCCCCCEEeeCCcC---CCCCceEECCCCCcccCCCCCcc
Confidence 998 899999999999954 4666 5 899 778999999999 8 88999999999999943 12457
Q ss_pred CCC--CCCCCCCCCCCCCCcccCCcccCCCccCC-CCCCeeeeCCCCceeeCCCCCccC
Q psy9427 163 VPQ--GQCPRGDADCPPSSRCSGGQCVSVCQGAC-GPNALCRAVGKRPVCACPDGFSAV 218 (324)
Q Consensus 163 ~~~--~eC~~~~~~C~~~~~C~~~~C~d~C~~~C-~~~~~C~~~~g~y~C~C~~Gy~g~ 218 (324)
+++ ++|. .+| .++++|+++.++|+|.|++||+|.
T Consensus 135 ~~~~~~~C~----------------------~~C~~~~~~C~n~~g~y~C~C~~G~~g~ 171 (186)
T 1z1y_A 135 TXTGETACQ----------------------LXCNTDNEVCXNVEGVYXCQCMEGFTFD 171 (186)
T ss_dssp EEEECCCCC----------------------CCCCTTTEEEEEETTEEEEEECTTCEEE
T ss_pred eEcCCCccc----------------------ccccccCcceecCCCCeeeECCCCCccC
Confidence 654 5662 247 788999999999999999999983
No 2
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.80 E-value=4.1e-19 Score=143.40 Aligned_cols=122 Identities=26% Similarity=0.623 Sum_probs=101.1
Q ss_pred cccCCC--CCCCCCCCEeeeCCCceeeeeCCCeeecCCCCCCc-ccCCCCCCcCCCCCceeCCCCcccCCCCCCCCCCCC
Q psy9427 13 CWNSCD--GVSCGVNAVCVVNNHEARCFCPPGSYVGDPNIECR-QVPCVHNHDCSTSHACDLLSHTCIPACDSGACGTNA 89 (324)
Q Consensus 13 c~~~C~--~~~C~~~~~C~~~~~~~~C~C~~G~y~g~~~~~C~-~~~C~~~~~C~~~~~C~c~~~~Ci~~C~~~~C~~~~ 89 (324)
.+|+|. .+||.++|+|++..++|+|+|++| |+|. .|. + +++|...+|.+++
T Consensus 4 dideC~~~~~~C~~~g~C~~~~g~~~C~C~~G-y~G~---~C~~~----------------------~~~C~~~~C~~~~ 57 (135)
T 2vj3_A 4 DVDECSLGANPCEHAGKCINTLGSFECQCLQG-YTGP---RCEID----------------------VNECVSNPCQNDA 57 (135)
T ss_dssp CCCTTTSSSCSSSTTCEEEECSSSEEEECCTT-EEST---TSCEE----------------------CCTTTTCCCCSSC
T ss_pred ccccccCCCCCCCCCCEeECCCCCEEEECCCC-CcCC---ccccc----------------------CccCCCCCCCCCC
Confidence 467897 579999999999999999999999 9885 343 3 7888888999999
Q ss_pred EEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCCCC-CCCCC
Q psy9427 90 VCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCV-PQGQC 168 (324)
Q Consensus 90 ~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~-~~~eC 168 (324)
+|++..++|.|.|++||+| ..|+..+++| ..++|..+++|++ +.++|+|+|++||+|.. |. ++++|
T Consensus 58 ~C~~~~g~~~C~C~~G~~G-----~~C~~~~~~C-~~~~C~~~g~C~~---~~g~~~C~C~~G~~G~~----C~~~i~~C 124 (135)
T 2vj3_A 58 TCLDQIGEFQCICMPGYEG-----VHCEVNTDEC-ASSPCLHNGRCLD---KINEFQCECPTGFTGHL----CQVDLHHI 124 (135)
T ss_dssp EEEECSSCEEEECCTTEES-----SSSCEECCTT-TTCCSTTTCEEEE---CSSCEEEECCTTEESSS----SCEECC--
T ss_pred EEeCCCCCceeeCCCCCcC-----CcceecCCcc-cCCCcCCCCEeEC---CCCCeEEECCCCCcCCc----cCccCccc
Confidence 9999999999999999998 7887434999 7789999999999 99999999999999876 64 78888
Q ss_pred CCCCC
Q psy9427 169 PRGDA 173 (324)
Q Consensus 169 ~~~~~ 173 (324)
.....
T Consensus 125 ~~~~~ 129 (135)
T 2vj3_A 125 LDAQK 129 (135)
T ss_dssp -----
T ss_pred cCCCc
Confidence 55443
No 3
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.78 E-value=1.7e-18 Score=139.83 Aligned_cols=119 Identities=27% Similarity=0.581 Sum_probs=96.7
Q ss_pred cCCCC--CCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCc
Q psy9427 77 IPACD--SGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSV 154 (324)
Q Consensus 77 i~~C~--~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~ 154 (324)
||+|. .++|.++++|+++.++|+|.|++||+| ..|+..+++| ..++|..+++|++ +.++|+|+|++||+
T Consensus 5 ideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G-----~~C~~~~~~C-~~~~C~~~~~C~~---~~g~~~C~C~~G~~ 75 (135)
T 2vj3_A 5 VDECSLGANPCEHAGKCINTLGSFECQCLQGYTG-----PRCEIDVNEC-VSNPCQNDATCLD---QIGEFQCICMPGYE 75 (135)
T ss_dssp CCTTTSSSCSSSTTCEEEECSSSEEEECCTTEES-----TTSCEECCTT-TTCCCCSSCEEEE---CSSCEEEECCTTEE
T ss_pred cccccCCCCCCCCCCEeECCCCCEEEECCCCCcC-----CcccccCccC-CCCCCCCCCEEeC---CCCCceeeCCCCCc
Confidence 78897 579999999999999999999999999 7886433999 7789999999999 99999999999999
Q ss_pred cCCCCCCCC-CCCCCCCCCCCCCCCCcccCCcccCCCccCCCCCCeeeeCCCCceeeCCCCCccCCCCCCCCccccCCCC
Q psy9427 155 GDPYKTGCV-PQGQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCACPDGFSAVGGEARVGCFREMSAC 233 (324)
Q Consensus 155 g~~~~~~C~-~~~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~~~~~C~~~~g~y~C~C~~Gy~g~~~~~~~~C~~~~~~C 233 (324)
|.. |. ++++|.. . +|.++++|+++.++|+|.|++||+| ..|+..+++|
T Consensus 76 G~~----C~~~~~~C~~--~-------------------~C~~~g~C~~~~g~~~C~C~~G~~G------~~C~~~i~~C 124 (135)
T 2vj3_A 76 GVH----CEVNTDECAS--S-------------------PCLHNGRCLDKINEFQCECPTGFTG------HLCQVDLHHI 124 (135)
T ss_dssp SSS----SCEECCTTTT--C-------------------CSTTTCEEEECSSCEEEECCTTEES------SSSCEECC--
T ss_pred CCc----ceecCCcccC--C-------------------CcCCCCEeECCCCCeEEECCCCCcC------CccCccCccc
Confidence 875 54 5677732 1 5788999999999999999999997 3464325555
Q ss_pred CC
Q psy9427 234 AG 235 (324)
Q Consensus 234 ~~ 235 (324)
..
T Consensus 125 ~~ 126 (135)
T 2vj3_A 125 LD 126 (135)
T ss_dssp --
T ss_pred cC
Confidence 43
No 4
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.73 E-value=7.9e-18 Score=137.01 Aligned_cols=120 Identities=25% Similarity=0.623 Sum_probs=93.6
Q ss_pred cCCCCCCCCCCCEeeeCC--CceeeeeCCCeeecCCCCCCccc-CCCCCCcCCCCCceeCCCCcccCCCCCCCCCCCCEE
Q psy9427 15 NSCDGVSCGVNAVCVVNN--HEARCFCPPGSYVGDPNIECRQV-PCVHNHDCSTSHACDLLSHTCIPACDSGACGTNAVC 91 (324)
Q Consensus 15 ~~C~~~~C~~~~~C~~~~--~~~~C~C~~G~y~g~~~~~C~~~-~C~~~~~C~~~~~C~c~~~~Ci~~C~~~~C~~~~~C 91 (324)
|+|..+||.++++|++.. ++|+|.|++| |+|.. |... ++.. ....|.. +++|...+|.++++|
T Consensus 1 d~C~~~pC~~~g~C~~~~~~g~~~C~C~~G-~~G~~---C~~~~~~~~-----~~~~c~~-----~~~C~~~~C~~~g~C 66 (143)
T 4d90_A 1 DICDPNPCENGGICLPGLADGSFSCECPDG-FTDPN---CSSVVEVAS-----DEEEPTS-----AGPCTPNPCHNGGTC 66 (143)
T ss_dssp --CCSCCCGGGCEEEC-----CCEEECCTT-CCTTT---TCSCCCCTT-----TTTSCCC-----CCTTSSCCCCTTCEE
T ss_pred CcCCCCcCCCCCEeeCCCCCCCEEeECCCC-CCCCC---CccCccccc-----ccccccc-----CCcCCCCCCCCCCEe
Confidence 578899999999999865 6899999999 98853 3221 1111 0111111 688988999999999
Q ss_pred e-------eCCCCcEeeCCCCCcCCCCCCCccc-ccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccCCC
Q psy9427 92 I-------PEDHRPVCHCPVGTHPSPSPDVHCA-RESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDPY 158 (324)
Q Consensus 92 ~-------~~~~~~~C~C~~G~~g~~~~~~~C~-~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~ 158 (324)
+ ++.++|+|.|++||+| ..|+ ++ ++| ..++|..+++|++ +.++|+|+|++||+|+..
T Consensus 67 ~~~~~~~~~~~~~~~C~C~~G~~G-----~~C~~~i-~~C-~~~~C~~~~~C~~---~~g~~~C~C~~G~~G~~c 131 (143)
T 4d90_A 67 EISEAYRGDTFIGYVCKCPRGFNG-----IHCQHNI-NEC-EVEPCKNGGICTD---LVANYSCECPGEFMGRNC 131 (143)
T ss_dssp EECCCEETTEECCEEEECCTTEES-----TTSCEEC-CTT-TTCCSCTTCEEEE---ETTEEEEECCTTCBSTTS
T ss_pred cCCCccccCCCCCeEeECcCCCcC-----CCcccCC-CcC-CCCCCCCCCEeEC---CCCCeEeECCCCCccCCc
Confidence 9 6668999999999998 8898 66 999 7889999999999 999999999999999874
No 5
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.72 E-value=8.9e-18 Score=136.82 Aligned_cols=119 Identities=22% Similarity=0.501 Sum_probs=98.3
Q ss_pred CCCCCCCEeeeCCCceeeeeCCCeeecCC------CCCCcccCCCCCCcCCCCCceeCCCCcccCCCCCC---CCCCCCE
Q psy9427 20 VSCGVNAVCVVNNHEARCFCPPGSYVGDP------NIECRQVPCVHNHDCSTSHACDLLSHTCIPACDSG---ACGTNAV 90 (324)
Q Consensus 20 ~~C~~~~~C~~~~~~~~C~C~~G~y~g~~------~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~~~---~C~~~~~ 90 (324)
++|.++|+|++. |+|.|++| |+|.. ...|.+ |++|... +|.++++
T Consensus 7 ~~C~~~~~C~~~---~~C~C~~G-~~g~~~~~~~~~~~C~d----------------------ideC~~~~~~~C~~~~~ 60 (143)
T 2bou_A 7 RWCPQDSSCVNA---TACRCNPG-FSSFSEIITTPMETCDD----------------------INECATLSKVSCGKFSD 60 (143)
T ss_dssp TTCCTTEEESSS---SCEEECTT-EECSSSSBCSTTCCCEE----------------------CCGGGC----CCCTTEE
T ss_pred CcCCCCCEEcCC---CEEeCCCC-CcCccccccCCCCcCCc----------------------cccccCCCCCCCCCCCE
Confidence 478899999874 89999999 99852 234555 8888764 8998999
Q ss_pred EeeCCCCcEeeCCCCCcCCCCC-------CCcccccCCCCCC-CCCCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCCC
Q psy9427 91 CIPEDHRPVCHCPVGTHPSPSP-------DVHCARESNLCRD-SNPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGC 162 (324)
Q Consensus 91 C~~~~~~~~C~C~~G~~g~~~~-------~~~C~~~~~~C~~-~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C 162 (324)
|+++.++|.|.|++||+|.... ...|+++ +||+. .++|..+++|++ +.++|+|+|++||+|......|
T Consensus 61 C~n~~g~y~C~C~~Gy~g~~~~~~~~~~~~~~C~di-deC~~~~~~C~~~~~C~n---~~g~y~C~C~~Gy~g~~~~~~C 136 (143)
T 2bou_A 61 CWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQDV-DECSSGQHQCDSSTVCFN---TVGSYSCRCRPGWKPRHGIPNN 136 (143)
T ss_dssp EEECSSCEEEEECTTEEETTCCSCBSSGGGCCEEEC-CHHHHTCCCCCTTSEEEE---CSSCEEEECCSSSCBCTTCCSS
T ss_pred EEcCCCCeEeECCCCcccCcCccccccCCCCCcCCc-cCccCcCCCCCCCCEEEC---CCCCEEeeCCCCcccCCCCccC
Confidence 9999999999999999986321 1478888 99943 468999999999 9999999999999999877778
Q ss_pred CCCCCC
Q psy9427 163 VPQGQC 168 (324)
Q Consensus 163 ~~~~eC 168 (324)
+++++|
T Consensus 137 ~~~~~C 142 (143)
T 2bou_A 137 QKDTVC 142 (143)
T ss_dssp BTTCCB
T ss_pred ccCCcc
Confidence 887766
No 6
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.70 E-value=1.9e-17 Score=134.93 Aligned_cols=118 Identities=19% Similarity=0.453 Sum_probs=90.2
Q ss_pred CCCCCCCEEeeCCCCcEeeCCCCCcCCC----CCCCcccccCCCCCCC--CCCCCCCeeecCCCCCCCeeeeCCCCCccC
Q psy9427 83 GACGTNAVCIPEDHRPVCHCPVGTHPSP----SPDVHCARESNLCRDS--NPCHPTARCEDTGATNGKVVCSCPELSVGD 156 (324)
Q Consensus 83 ~~C~~~~~C~~~~~~~~C~C~~G~~g~~----~~~~~C~~~~~~C~~~--~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~ 156 (324)
.+|.++++|++. |.|.|++||+|+. .....|+++ ++|+.. .+|..+++|++ +.++|+|+|++||+|.
T Consensus 7 ~~C~~~~~C~~~---~~C~C~~G~~g~~~~~~~~~~~C~di-deC~~~~~~~C~~~~~C~n---~~g~y~C~C~~Gy~g~ 79 (143)
T 2bou_A 7 RWCPQDSSCVNA---TACRCNPGFSSFSEIITTPMETCDDI-NECATLSKVSCGKFSDCWN---TEGSYDCVCSPGYEPV 79 (143)
T ss_dssp TTCCTTEEESSS---SCEEECTTEECSSSSBCSTTCCCEEC-CGGGC----CCCTTEEEEE---CSSCEEEEECTTEEET
T ss_pred CcCCCCCEEcCC---CEEeCCCCCcCccccccCCCCcCCcc-ccccCCCCCCCCCCCEEEc---CCCCeEeECCCCcccC
Confidence 578888999874 8999999999852 112689888 999443 28998999999 9999999999999998
Q ss_pred CCC--------CCCCCCCCCCCCCCCCCCCCcccCCcccCCCccCCCCCCeeeeCCCCceeeCCCCCccCCCCCCCCccc
Q psy9427 157 PYK--------TGCVPQGQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCACPDGFSAVGGEARVGCFR 228 (324)
Q Consensus 157 ~~~--------~~C~~~~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~~~~~C~~~~g~y~C~C~~Gy~g~~~~~~~~C~~ 228 (324)
... ..|++++||....+ +|.++++|+++.|+|+|.|++||+|. .....|++
T Consensus 80 ~~~~~~~~~~~~~C~dideC~~~~~-------------------~C~~~~~C~n~~g~y~C~C~~Gy~g~--~~~~~C~~ 138 (143)
T 2bou_A 80 SGAKTFKNESENTCQDVDECSSGQH-------------------QCDSSTVCFNTVGSYSCRCRPGWKPR--HGIPNNQK 138 (143)
T ss_dssp TCCSCBSSGGGCCEEECCHHHHTCC-------------------CCCTTSEEEECSSCEEEECCSSSCBC--TTCCSSBT
T ss_pred cCccccccCCCCCcCCccCccCcCC-------------------CCCCCCEEECCCCCEEeeCCCCcccC--CCCccCcc
Confidence 542 24666666633222 58889999999999999999999983 22344544
No 7
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.69 E-value=6.1e-17 Score=131.74 Aligned_cols=107 Identities=30% Similarity=0.722 Sum_probs=85.9
Q ss_pred CCCCCCCCCCCCEEeeCC--CCcEeeCCCCCcCCCCCCCccccc------------CCCCCCCCCCCCCCeee-------
Q psy9427 78 PACDSGACGTNAVCIPED--HRPVCHCPVGTHPSPSPDVHCARE------------SNLCRDSNPCHPTARCE------- 136 (324)
Q Consensus 78 ~~C~~~~C~~~~~C~~~~--~~~~C~C~~G~~g~~~~~~~C~~~------------~~~C~~~~~C~~~~~C~------- 136 (324)
|+|.++||.++++|++.. ++|.|.|++||+| ..|+.+ +++| ..++|.++++|+
T Consensus 1 d~C~~~pC~~~g~C~~~~~~g~~~C~C~~G~~G-----~~C~~~~~~~~~~~~c~~~~~C-~~~~C~~~g~C~~~~~~~~ 74 (143)
T 4d90_A 1 DICDPNPCENGGICLPGLADGSFSCECPDGFTD-----PNCSSVVEVASDEEEPTSAGPC-TPNPCHNGGTCEISEAYRG 74 (143)
T ss_dssp --CCSCCCGGGCEEEC-----CCEEECCTTCCT-----TTTCSCCCCTTTTTSCCCCCTT-SSCCCCTTCEEEECCCEET
T ss_pred CcCCCCcCCCCCEeeCCCCCCCEEeECCCCCCC-----CCCccCccccccccccccCCcC-CCCCCCCCCEecCCCcccc
Confidence 567788999999999865 6899999999998 555431 2678 677899999999
Q ss_pred cCCCCCCCeeeeCCCCCccCCCCCCCC-CCCCCCCCCCCCCCCCcccCCcccCCCccCCCCCCeeeeCCCCceeeCCCCC
Q psy9427 137 DTGATNGKVVCSCPELSVGDPYKTGCV-PQGQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCACPDGF 215 (324)
Q Consensus 137 ~~~~~~g~~~C~C~~G~~g~~~~~~C~-~~~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~~~~~C~~~~g~y~C~C~~Gy 215 (324)
+ +.++|+|+|++||+|.. |. ++++|.. . +|.++++|+++.++|+|.|++||
T Consensus 75 ~---~~~~~~C~C~~G~~G~~----C~~~i~~C~~--~-------------------~C~~~~~C~~~~g~~~C~C~~G~ 126 (143)
T 4d90_A 75 D---TFIGYVCKCPRGFNGIH----CQHNINECEV--E-------------------PCKNGGICTDLVANYSCECPGEF 126 (143)
T ss_dssp T---EECCEEEECCTTEESTT----SCEECCTTTT--C-------------------CSCTTCEEEEETTEEEEECCTTC
T ss_pred C---CCCCeEeECcCCCcCCC----cccCCCcCCC--C-------------------CCCCCCEeECCCCCeEeECCCCC
Confidence 6 67899999999998765 76 7888832 1 47889999999999999999999
Q ss_pred ccC
Q psy9427 216 SAV 218 (324)
Q Consensus 216 ~g~ 218 (324)
+|.
T Consensus 127 ~G~ 129 (143)
T 4d90_A 127 MGR 129 (143)
T ss_dssp BST
T ss_pred ccC
Confidence 983
No 8
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.66 E-value=2.7e-16 Score=155.25 Aligned_cols=132 Identities=27% Similarity=0.567 Sum_probs=104.8
Q ss_pred cCCCCCCCCCCCCEEeeCCC-CcEe-eCCCCCcCCCCCCCcccccCCCCCCCCC--CCCCC---eeecCCCCCCCeeee-
Q psy9427 77 IPACDSGACGTNAVCIPEDH-RPVC-HCPVGTHPSPSPDVHCARESNLCRDSNP--CHPTA---RCEDTGATNGKVVCS- 148 (324)
Q Consensus 77 i~~C~~~~C~~~~~C~~~~~-~~~C-~C~~G~~g~~~~~~~C~~~~~~C~~~~~--C~~~~---~C~~~~~~~g~~~C~- 148 (324)
|++|..+||.++++|+++.+ +|+| .|++||+|++ ..|+++ +|| ..++ |.+++ +|++ +.++|+|.
T Consensus 3 IDeC~~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg---~~CeDi-DEC-~~~p~~C~~gg~~~~CvN---t~gsY~C~~ 74 (634)
T 1yo8_A 3 PDGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNG---THCEDL-DEC-ALVPDICFSTSKVPRCVN---TQPGFHCLP 74 (634)
T ss_dssp -CGGGGCCSCTTCCEEECTTSCEEECCCCTTBCSCS---SSCCBC-CTT-TTSCCCSCCCSSSCCEEE---CSSSEEECC
T ss_pred ccccCCCCCCCCCEEecCCCCCeECCcCCCccCCCC---CCcccc-ccc-cCCCCcccCCccccceee---ccCceeccc
Confidence 78898899999999999885 4999 9999999876 789988 999 6566 99888 9999 99999998
Q ss_pred CCCCCccCCCC-----------CCCCCCCCCCCCCCCCCCCCcccCCcccCCCccCCCCCCeeeeCC----CCceeeCCC
Q psy9427 149 CPELSVGDPYK-----------TGCVPQGQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAVG----KRPVCACPD 213 (324)
Q Consensus 149 C~~G~~g~~~~-----------~~C~~~~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~~~~~C~~~~----g~y~C~C~~ 213 (324)
|++||+|..+. ..|++++||....+ +|+++++|+++. ++|+|.|++
T Consensus 75 C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~-------------------pC~~~~~Cvnt~~~~~GsY~C~C~~ 135 (634)
T 1yo8_A 75 CPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTH-------------------NCHKHAECIYLGHFSDPMYKCECQT 135 (634)
T ss_dssp CCTTEEECCCEESSSHHHHSCCCCEEECCTTTTTCC-------------------CCCTTEEEEECCTTCSSSEEEEECT
T ss_pred CCCCcccCccccccccccccCCCcccccccccCCCc-------------------ccccCccccccccccccceeeeccC
Confidence 99999998742 24777777743322 588899999998 999999999
Q ss_pred CCccCCCCCCCCcc---ccCCCCCC-CCccC
Q psy9427 214 GFSAVGGEARVGCF---REMSACAG-DQECL 240 (324)
Q Consensus 214 Gy~g~~~~~~~~C~---~~~~~C~~-~~~C~ 240 (324)
||+|. ...|+ + +++|.. ...|.
T Consensus 136 Gy~Gd----G~~Ce~d~D-iDeC~~~~~~C~ 161 (634)
T 1yo8_A 136 GYAGD----GLICGEDSD-LDGWPNLNLVCA 161 (634)
T ss_dssp TEEES----SSSEEECTT-SSSSCSSCCTTT
T ss_pred Ccccc----CcccccccC-cccccCCCCccc
Confidence 99972 12465 3 566643 34553
No 9
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=99.66 E-value=4.2e-18 Score=141.72 Aligned_cols=139 Identities=21% Similarity=0.448 Sum_probs=98.2
Q ss_pred cccCCC-CCCCCCCCEeeeCCCceeeeeCCCeeecCC-CCCCcccCCCCCCcCCCCCceeCCCCcccCC--CCC--CCC-
Q psy9427 13 CWNSCD-GVSCGVNAVCVVNNHEARCFCPPGSYVGDP-NIECRQVPCVHNHDCSTSHACDLLSHTCIPA--CDS--GAC- 85 (324)
Q Consensus 13 c~~~C~-~~~C~~~~~C~~~~~~~~C~C~~G~y~g~~-~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~--C~~--~~C- 85 (324)
.+|+|+ .+||. +++|+++.++|+|+|++| |++++ ...|.+ +++ |.. .+|
T Consensus 2 dideC~~~~~C~-~~~C~n~~gsy~C~C~~G-y~~~~~g~~C~d----------------------~~~~~C~~~~~~c~ 57 (162)
T 1uzk_A 2 DVNECLDPTTCI-SGNCVNTPGSYICDCPPD-FELNPTRVGCVD----------------------TRSGNCYLDIRPRG 57 (162)
T ss_dssp CCCGGGSTTSSB-TSEEEEETTEEEEECCTT-CEECTTSSBEEC----------------------CCCEEEEEEC----
T ss_pred ccccCCCCCCCC-CCEeECCCCCEEEeCCCC-CeECCCCCcccC----------------------CCCCcccCCCcccC
Confidence 367787 48997 789999999999999999 88643 335554 343 532 223
Q ss_pred -CCCCEEeeCCC----CcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCC--CCccCCC
Q psy9427 86 -GTNAVCIPEDH----RPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPE--LSVGDPY 158 (324)
Q Consensus 86 -~~~~~C~~~~~----~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~--G~~g~~~ 158 (324)
..+++|+++.+ +|.|.|++||.+. ..|+ .|.+. ..++|+|.|++ ||+++..
T Consensus 58 ~~~~~~C~~~~~~~~~~~~C~C~~G~~~~----~~C~----------------~C~~~--~~~~y~C~C~~g~G~~~~~~ 115 (162)
T 1uzk_A 58 DNGDTACSNEIGVGVSKASCCCSLGKAWG----TPCE----------------MCPAV--NTSEYKILCPGGEGFRPNPI 115 (162)
T ss_dssp ------CEEEEEEEECHHHHHTTTCCEET----TTTE----------------ECCCT--TSHHHHHHCTTCTTEEECTT
T ss_pred CCCCCcccCCcCCcccCceeeCCCCCCcC----CCcc----------------cCCCC--CCCCceeECCCCCCcccCCC
Confidence 24678998877 8999999999841 2232 13221 56789999998 9999875
Q ss_pred CCCCCCCCCCCCCCCCCCCCCcccCCcccCCCccCCCCCCeeeeCCCCceeeCCCCCcc
Q psy9427 159 KTGCVPQGQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCACPDGFSA 217 (324)
Q Consensus 159 ~~~C~~~~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~~~~~C~~~~g~y~C~C~~Gy~g 217 (324)
...|++++||+...+ +|.+ ++|+++.|+|+|.|++||+|
T Consensus 116 ~~~c~dideC~~~~~-------------------~C~~-g~C~n~~gsy~C~C~~Gy~g 154 (162)
T 1uzk_A 116 TVILEDIDECQELPG-------------------LCQG-GKCINTFGSFQCRCPTGYYL 154 (162)
T ss_dssp TCCEEECCHHHHCGG-------------------GGBT-SEEEECSSCEEEECCTTCCB
T ss_pred CCccCccccccCCCC-------------------CcCC-CEeEcCCCCEEeeCCCCccC
Confidence 556888888844322 4654 79999999999999999997
No 10
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.66 E-value=3.2e-16 Score=154.75 Aligned_cols=133 Identities=25% Similarity=0.547 Sum_probs=107.7
Q ss_pred ccCCCCCCCCCCCEeeeCCC-ceee-eeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCCCCCCC--CCCCC
Q psy9427 14 WNSCDGVSCGVNAVCVVNNH-EARC-FCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACDSGA--CGTNA 89 (324)
Q Consensus 14 ~~~C~~~~C~~~~~C~~~~~-~~~C-~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~~~~--C~~~~ 89 (324)
+++|..+||.++++|+++.+ +|+| .|++| |+|+.. .|++ |++|...+ |.+++
T Consensus 3 IDeC~~nPC~~gg~C~n~~~Gsy~C~~C~~G-ytGdg~-~CeD----------------------iDEC~~~p~~C~~gg 58 (634)
T 1yo8_A 3 PDGCLSNPCFPGAQCSSFPDGSWSCGFCPVG-FLGNGT-HCED----------------------LDECALVPDICFSTS 58 (634)
T ss_dssp -CGGGGCCSCTTCCEEECTTSCEEECCCCTT-BCSCSS-SCCB----------------------CCTTTTSCCCSCCCS
T ss_pred ccccCCCCCCCCCEEecCCCCCeECCcCCCc-cCCCCC-Cccc----------------------cccccCCCCcccCCc
Confidence 57788899999999999875 5999 99999 887532 4665 88998777 99988
Q ss_pred ---EEeeCCCCcEee-CCCCCcCCCC----------CCCcccccCCCCCC-CCCCCCCCeeecCCCCC----CCeeeeCC
Q psy9427 90 ---VCIPEDHRPVCH-CPVGTHPSPS----------PDVHCARESNLCRD-SNPCHPTARCEDTGATN----GKVVCSCP 150 (324)
Q Consensus 90 ---~C~~~~~~~~C~-C~~G~~g~~~----------~~~~C~~~~~~C~~-~~~C~~~~~C~~~~~~~----g~~~C~C~ 150 (324)
+|+++.++|+|. |++||+|... ....|+++ ++|+. .++|+.+++|++ +. ++|+|+|+
T Consensus 59 ~~~~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~di-deC~~~~~pC~~~~~Cvn---t~~~~~GsY~C~C~ 134 (634)
T 1yo8_A 59 KVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPE-NPCKDKTHNCHKHAECIY---LGHFSDPMYKCECQ 134 (634)
T ss_dssp SSCCEEECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCEEEC-CTTTTTCCCCCTTEEEEE---CCTTCSSSEEEEEC
T ss_pred cccceeeccCceecccCCCCcccCccccccccccccCCCccccc-ccccCCCcccccCccccc---cccccccceeeecc
Confidence 999999999998 9999998652 11458888 99944 358999999999 88 99999999
Q ss_pred CCCccCCCCCCCC---CCCCCCCCCCCCC
Q psy9427 151 ELSVGDPYKTGCV---PQGQCPRGDADCP 176 (324)
Q Consensus 151 ~G~~g~~~~~~C~---~~~eC~~~~~~C~ 176 (324)
+||+|++ ..|. +++||......|.
T Consensus 135 ~Gy~GdG--~~Ce~d~DiDeC~~~~~~C~ 161 (634)
T 1yo8_A 135 TGYAGDG--LICGEDSDLDGWPNLNLVCA 161 (634)
T ss_dssp TTEEESS--SSEEECTTSSSSCSSCCTTT
T ss_pred CCccccC--cccccccCcccccCCCCccc
Confidence 9999976 3475 8888865555443
No 11
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.61 E-value=8.9e-20 Score=161.30 Aligned_cols=179 Identities=10% Similarity=-0.049 Sum_probs=131.5
Q ss_pred CCCCCCCEeeeCCCceeeeeCCCeeecCCCC----C------CcccCCCCCCcCCCCCceeCCCCcccCCCCCCCCCCCC
Q psy9427 20 VSCGVNAVCVVNNHEARCFCPPGSYVGDPNI----E------CRQVPCVHNHDCSTSHACDLLSHTCIPACDSGACGTNA 89 (324)
Q Consensus 20 ~~C~~~~~C~~~~~~~~C~C~~G~y~g~~~~----~------C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~~~~C~~~~ 89 (324)
.+|.++++|++..++|+|.|++| |+|.... + |...||+++++|.....|.. +++|.+.||.+++
T Consensus 38 ~~c~ngG~C~~g~~~y~C~Cp~G-f~G~~Ce~ni~ec~~~~~c~s~pC~nggtc~~G~~c~~-----~~eC~s~pC~ngG 111 (267)
T 4fbr_A 38 IKSDDGGKTLKGTMTYNGEGPIG-FRGTLSSANNYTVENQWGGTSAPWQPGGVWVLGARDKQ-----NIVAVSIKSNDGG 111 (267)
T ss_dssp EECSSTTSEEEEEEEETTSCCEE-EEEEECSTTEEEEEEESSSTTSCEEEEEEEECCCCSSC-----CEEEEEEECSSTT
T ss_pred CCcCCCCeecCCCCCeEEeCCCC-cccccccccccccccccCcCCCcccCCCeeeccCcccc-----ccccCCCCCCCCC
Confidence 47899999999999999999999 9986432 3 66668888777755554443 6688889999999
Q ss_pred EEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCC----------------------------CCCCCCCCCeeecCCCC
Q psy9427 90 VCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCR----------------------------DSNPCHPTARCEDTGAT 141 (324)
Q Consensus 90 ~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~----------------------------~~~~C~~~~~C~~~~~~ 141 (324)
+|++...+|.|.|++||+| ..|+..+++|+ ...+|.++++|++ .
T Consensus 112 ~C~~~~~sy~C~C~~Gf~G-----~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~~c~ngg~C~d---g 183 (267)
T 4fbr_A 112 KTLTGTTTYNGEGPIGFKS-----EVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVDAKSNDGGKTLS---G 183 (267)
T ss_dssp SEEEEEEEETTSCCEEEEE-----EECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEEEECSSTTSEEE---E
T ss_pred EEecCCccEEeeCCCCccc-----cCCCCCcccccccCCcCCccccCCcceecccccccccccCCCCCCCCCEeeC---C
Confidence 9999999999999999998 55543323310 1235778889988 8
Q ss_pred CCCeeeeCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCcccC----------CcccCCCccCCCCCCeeeeCCCCceeeC
Q psy9427 142 NGKVVCSCPELSVGDPYKTGCVPQGQCPRGDADCPPSSRCSG----------GQCVSVCQGACGPNALCRAVGKRPVCAC 211 (324)
Q Consensus 142 ~g~~~C~C~~G~~g~~~~~~C~~~~eC~~~~~~C~~~~~C~~----------~~C~d~C~~~C~~~~~C~~~~g~y~C~C 211 (324)
..+|+|.|++||+|..+. .+++++ .....+ ....|.+ +.-++.|..+|.++++|++...+|+|.|
T Consensus 184 ~~~y~C~Cp~Gf~G~~c~---~~i~ec-~~~~~c-~~~~c~~gG~~~~~C~~g~n~~~c~~~c~ngGtC~dg~~sy~CeC 258 (267)
T 4fbr_A 184 TMTYNGEGPIGFRGTLTS---PDTYTV-ENQWGG-STAPWNPGGFWMIGARNGQNVVALNVASSDGGKTLAGTMIYNGEG 258 (267)
T ss_dssp EEEETTSCCEEEEEEEEE---TTEEEE-EEECSC-TTSCCEEEEEEECCCCTTCCEEEEEEECSSTTSEEEEEEEETTSC
T ss_pred CCCeEEeCCCCccccccc---ccccee-ccCCCc-cCCcccCCCeEEEecCCCCccccCCcCCCCCCEeeCCCcceeecC
Confidence 899999999999987632 244543 222111 1223333 2213444448999999999999999999
Q ss_pred CCCCcc
Q psy9427 212 PDGFSA 217 (324)
Q Consensus 212 ~~Gy~g 217 (324)
|+||+|
T Consensus 259 p~GF~G 264 (267)
T 4fbr_A 259 PIGFRA 264 (267)
T ss_dssp CEEEEE
T ss_pred CCCccc
Confidence 999997
No 12
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.61 E-value=2.7e-16 Score=133.73 Aligned_cols=118 Identities=29% Similarity=0.702 Sum_probs=98.0
Q ss_pred cc--ccCCC----CCCCCCCCEeeeCC-----CceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCCC
Q psy9427 12 TC--WNSCD----GVSCGVNAVCVVNN-----HEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPAC 80 (324)
Q Consensus 12 ~c--~~~C~----~~~C~~~~~C~~~~-----~~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C 80 (324)
.| +++|. .+||.++++|+++. ++|+|.|++| |+|+.. .|. +++|
T Consensus 40 ~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G-~~g~~~-~C~-----------------------~d~C 94 (186)
T 1z1y_A 40 TCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEG-YTLXED-TCV-----------------------LDVC 94 (186)
T ss_dssp EEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTT-EEEETT-EEE-----------------------EGGG
T ss_pred ccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCC-CccCCC-CCC-----------------------CCcC
Confidence 55 46798 67899999999998 8999999999 998532 122 6788
Q ss_pred CCCCCCCCCEEe----eCCCCcEeeCCCCCcCCCCCCCccccc-CCCCCCCCCC-CCCCeeecCCCCCCCeeeeCCCCCc
Q psy9427 81 DSGACGTNAVCI----PEDHRPVCHCPVGTHPSPSPDVHCARE-SNLCRDSNPC-HPTARCEDTGATNGKVVCSCPELSV 154 (324)
Q Consensus 81 ~~~~C~~~~~C~----~~~~~~~C~C~~G~~g~~~~~~~C~~~-~~~C~~~~~C-~~~~~C~~~~~~~g~~~C~C~~G~~ 154 (324)
...+|.++++|+ ++.++|+|.|++||+|.+.....|+++ +++| . ++| ..+++|++ +.++|+|+|++||+
T Consensus 95 ~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~~~~~C-~-~~C~~~~~~C~n---~~g~y~C~C~~G~~ 169 (186)
T 1z1y_A 95 QYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETAC-Q-LXCNTDNEVCXN---VEGVYXCQCMEGFT 169 (186)
T ss_dssp TTCCCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEEEECCCC-C-CCCCTTTEEEEE---ETTEEEEEECTTCE
T ss_pred cCCCCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceEcCCCcc-c-ccccccCcceec---CCCCeeeECCCCCc
Confidence 888899999999 888899999999999943222789875 4889 4 489 88999999 99999999999999
Q ss_pred cCCCC
Q psy9427 155 GDPYK 159 (324)
Q Consensus 155 g~~~~ 159 (324)
|+...
T Consensus 170 g~~~~ 174 (186)
T 1z1y_A 170 FDXEX 174 (186)
T ss_dssp EETTT
T ss_pred cCccc
Confidence 98754
No 13
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=99.56 E-value=1.1e-15 Score=120.31 Aligned_cols=110 Identities=25% Similarity=0.565 Sum_probs=85.9
Q ss_pred cccCCCCCCCCCCCEeeeC-CCceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCCCCCCCCCCCCEE
Q psy9427 13 CWNSCDGVSCGVNAVCVVN-NHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACDSGACGTNAVC 91 (324)
Q Consensus 13 c~~~C~~~~C~~~~~C~~~-~~~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~~~~C~~~~~C 91 (324)
-+|+|..+||.+ +|+++ .++|+|.|++| |+|.... . ..|.++|...+|. ++|
T Consensus 3 dideC~~~pC~~--~C~~~~~g~y~C~C~~G-y~g~~~~---~-------------------~~C~~~C~~~~C~--~~C 55 (118)
T 1dx5_I 3 PVDPCFRANCEY--QCQPLDQTSYLCVCAEG-FAPIPHE---P-------------------HRCQMFCNQTACP--ADC 55 (118)
T ss_dssp CCCGGGGCCCSS--EEEECSSSCEEEECCTT-EEEETTE---E-------------------EEEEECCCSSEEE--CEE
T ss_pred ccccCCCCCCCC--CCCCCCCCCEEeECCCC-ccccCCC---C-------------------CccccccCCCCCC--Ccc
Confidence 467888899973 99999 99999999999 9886321 0 0112334445564 688
Q ss_pred eeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccCCC
Q psy9427 92 IPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDPY 158 (324)
Q Consensus 92 ~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~ 158 (324)
++ .++|.|.|++||+++. ...|+++ +||+..++| +++|++ ++++|+|+|++||+|...
T Consensus 56 ~~-~~~y~C~C~~Gy~~~~--g~~C~di-deC~~~~~C--~~~C~n---~~g~y~C~C~~G~~g~~~ 113 (118)
T 1dx5_I 56 DP-NTQASCECPEGYILDD--GFICTDI-DECENGGFC--SGVCHN---LPGTFECICGPDSALAGQ 113 (118)
T ss_dssp CT-TSTTCEECCTTEEEET--TTEEEEC-CHHHHCSSC--SSEEEE---CSSSEEEEECSSSSCEEE
T ss_pred cC-CCCeEeECCCCccCCC--CCccccc-cccCCCCCC--cCeEEe---CCCCEEEECCCCCccCCC
Confidence 87 5899999999999643 1889888 999444789 799999 999999999999998653
No 14
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=99.50 E-value=2.9e-15 Score=117.89 Aligned_cols=106 Identities=24% Similarity=0.616 Sum_probs=82.1
Q ss_pred cCCCCCCCCCCCCEEeeC-CCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCcc
Q psy9427 77 IPACDSGACGTNAVCIPE-DHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVG 155 (324)
Q Consensus 77 i~~C~~~~C~~~~~C~~~-~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g 155 (324)
||+|..+||. ++|+++ .++|.|.|++||+|.......|+ ++| ...+|. ++|++ . ++|+|+|++||++
T Consensus 4 ideC~~~pC~--~~C~~~~~g~y~C~C~~Gy~g~~~~~~~C~---~~C-~~~~C~--~~C~~---~-~~y~C~C~~Gy~~ 71 (118)
T 1dx5_I 4 VDPCFRANCE--YQCQPLDQTSYLCVCAEGFAPIPHEPHRCQ---MFC-NQTACP--ADCDP---N-TQASCECPEGYIL 71 (118)
T ss_dssp CCGGGGCCCS--SEEEECSSSCEEEECCTTEEEETTEEEEEE---ECC-CSSEEE--CEECT---T-STTCEECCTTEEE
T ss_pred cccCCCCCCC--CCCCCCCCCCEEeECCCCccccCCCCCccc---ccc-CCCCCC--CcccC---C-CCeEeECCCCccC
Confidence 7889888997 399999 89999999999998532111332 224 344564 78987 5 8899999999997
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCcccCCcccCCCccCCCCCCeeeeCCCCceeeCCCCCcc
Q psy9427 156 DPYKTGCVPQGQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCACPDGFSA 217 (324)
Q Consensus 156 ~~~~~~C~~~~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~~~~~C~~~~g~y~C~C~~Gy~g 217 (324)
+. ...|++++||.. .+ +| +++|+++.++|+|.|++||+|
T Consensus 72 ~~-g~~C~dideC~~-~~-------------------~C--~~~C~n~~g~y~C~C~~G~~g 110 (118)
T 1dx5_I 72 DD-GFICTDIDECEN-GG-------------------FC--SGVCHNLPGTFECICGPDSAL 110 (118)
T ss_dssp ET-TTEEEECCHHHH-CS-------------------SC--SSEEEECSSSEEEEECSSSSC
T ss_pred CC-CCccccccccCC-CC-------------------CC--cCeEEeCCCCEEEECCCCCcc
Confidence 65 456888998843 12 47 689999999999999999986
No 15
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.49 E-value=2.8e-14 Score=131.40 Aligned_cols=147 Identities=26% Similarity=0.680 Sum_probs=64.2
Q ss_pred CCCCCCCCCCCEeeeCCCceeeeeCCCeeecCCCC--CCcccCCCCCCcCCCCCceeCCCC----cc-cCCCCCCCCCCC
Q psy9427 16 SCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDPNI--ECRQVPCVHNHDCSTSHACDLLSH----TC-IPACDSGACGTN 88 (324)
Q Consensus 16 ~C~~~~C~~~~~C~~~~~~~~C~C~~G~y~g~~~~--~C~~~~C~~~~~C~~~~~C~c~~~----~C-i~~C~~~~C~~~ 88 (324)
.|. ++|.++|+|.+ .+.|.|++| |+|+... .|.. +|.+++.|...+.|.|..| .| .+.|. .+|.++
T Consensus 150 ~C~-~~C~~~G~C~~---~~~C~C~~G-~~G~~C~~~~C~~-~C~~~G~C~~~~~C~C~~G~~G~~C~~~~C~-~~C~~~ 222 (324)
T 2ygq_A 150 ECP-GGCRNGGFCNE---RRICECPDG-FHGPHCEKALCTP-RCMNGGLCVTPGFCICPPGFYGVNCDKANCS-TTCFNG 222 (324)
T ss_dssp CCS-SCCCSSCEECT---TSCEECCTT-EESSSSCEESSSS-CCCTTCEECSSCCEECCTTCBTTTTCBCCCS-SCCCSS
T ss_pred CCC-CCCCCCCEECC---CCeEECCCC-CcCCCCCCCCCCC-CCCCCCEEcCCCEEeCCCCccCCCcccCcCC-CCCCCC
Confidence 453 57999999975 478999999 9997543 3443 6888888887788888766 45 44564 578888
Q ss_pred CEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCCCCCCCCC
Q psy9427 89 AVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQC 168 (324)
Q Consensus 89 ~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~~~~eC 168 (324)
++|++ .+.|.|++||+| ..|+. ++| . .+|.++++|+. .++|.|++||+|+.+ . .++|
T Consensus 223 G~C~~---~~~C~C~~G~~G-----~~C~~--~~C-~-~~C~~~g~C~~------~~~C~C~~G~~G~~C----~-~~~C 279 (324)
T 2ygq_A 223 GTCFY---PGKCICPPGLEG-----EQCEI--SKC-P-QPCRNGGKCIG------KSKCKCSKGYQGDLC----S-KPVC 279 (324)
T ss_dssp CCBSC---SSCBCCCTTCCT-----TTTC---------------------------------------------------
T ss_pred CeeCC---CCeeeCCCCccC-----CCCCc--CcC-C-CcCCCCCEECC------CCEEECCCCCcCCCC----c-CCCC
Confidence 88865 367888888888 66753 566 2 57877888864 368888888888763 2 2233
Q ss_pred CCCCCCCCCCCcccCCcccCCCccCCCCCCeeeeCCCCceeeCCCCCcc
Q psy9427 169 PRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCACPDGFSA 217 (324)
Q Consensus 169 ~~~~~~C~~~~~C~~~~C~d~C~~~C~~~~~C~~~~g~y~C~C~~Gy~g 217 (324)
..+|.++++|++ .++|.|++||+|
T Consensus 280 ----------------------~~~C~~~g~C~~---~~~C~C~~G~~G 303 (324)
T 2ygq_A 280 ----------------------EPGCGAHGTCHE---PNKCQCQEGWHG 303 (324)
T ss_dssp -------------------------------------------------
T ss_pred ----------------------CCCCCCCCEECC---CCEeECCCCCcC
Confidence 225777889986 479999999998
No 16
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=99.45 E-value=3.2e-15 Score=122.21 Aligned_cols=114 Identities=23% Similarity=0.456 Sum_probs=79.9
Q ss_pred cCCCCCCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCC-----------CCCC-CCCCCCCCeeecCCCCCCC
Q psy9427 77 IPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESN-----------LCRD-SNPCHPTARCEDTGATNGK 144 (324)
Q Consensus 77 i~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~-----------~C~~-~~~C~~~~~C~~~~~~~g~ 144 (324)
||+|..+||.+ ++|+++.++|+|.|++||+|+... ..|+++ + .|.. .+.|...+.|.+ ..++
T Consensus 4 ideC~~~pC~n-g~C~n~~g~y~C~C~~G~~g~~~~-~~C~~~-~~~~C~~~~~g~~C~~~~~~c~~~~~C~~---~~g~ 77 (147)
T 2w86_A 4 IDECESSPCIN-GVCKNSPGSFICECSSESTLDPTK-TICIET-IKGTCWQTVIDGRCEININGATLKSQCCS---SLGA 77 (147)
T ss_dssp CCGGGGCCSBT-SEEEEETTEEEEECCTTEEECTTS-SBEEEC-CCEEEEEEEETTEEEEEEEEEECHHHHHT---TTCS
T ss_pred CccCcCCCCCC-CEeECCCCCEEeECCCCcccCCCC-CeecCC-CCCcccCCCCCCccccCCCccccCCcccc---CcCc
Confidence 78998899974 799999999999999999986543 556543 1 1200 011222223444 3343
Q ss_pred ----------eeeeCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCcccCCcccCCCccCCCCCCeeeeCCCCceeeCCCC
Q psy9427 145 ----------VVCSCPELSVGDPYKTGCVPQGQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCACPDG 214 (324)
Q Consensus 145 ----------~~C~C~~G~~g~~~~~~C~~~~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~~~~~C~~~~g~y~C~C~~G 214 (324)
|.|.|++||++.. ...|++++||+...+ +|.+ ++|+++.++|+|.|++|
T Consensus 78 ~~g~~C~~c~~~C~C~~Gy~~~~-g~~C~dideC~~~~~-------------------~C~~-g~C~n~~g~y~C~C~~G 136 (147)
T 2w86_A 78 AWGSPCTLCQVDPICGKGYSRIK-GTQCEDIDECEVFPG-------------------VCKN-GLCVNTRGSFKCQCPSG 136 (147)
T ss_dssp EETTTTEECCCCTTTCTTEEEEE-TTEEEECCHHHHSTT-------------------CSSS-SEEEEETTEEEEECCTT
T ss_pred ccCCCcccCCCcccCCCccccCC-CCccCccccccCCCC-------------------CCCC-CEEECCCCCEEeeCCCC
Confidence 7889999997521 245888888854333 3664 59999999999999999
Q ss_pred Ccc
Q psy9427 215 FSA 217 (324)
Q Consensus 215 y~g 217 (324)
|+|
T Consensus 137 y~g 139 (147)
T 2w86_A 137 MTL 139 (147)
T ss_dssp CCB
T ss_pred Ccc
Confidence 997
No 17
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=99.41 E-value=1.4e-14 Score=118.42 Aligned_cols=132 Identities=20% Similarity=0.382 Sum_probs=82.5
Q ss_pred cccCCCCCCCCCCCEeeeCCCceeeeeCCCeeecCCC-CCCcccCCCCCCcCCCCCceeCCCCcc---cCCCCC------
Q psy9427 13 CWNSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDPN-IECRQVPCVHNHDCSTSHACDLLSHTC---IPACDS------ 82 (324)
Q Consensus 13 c~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~y~g~~~-~~C~~~~C~~~~~C~~~~~C~c~~~~C---i~~C~~------ 82 (324)
-+|+|+.+||.+ ++|+++.++|+|+|++| |+++.. ..|.+. ..+.|...+ ..+.| +++|..
T Consensus 3 dideC~~~pC~n-g~C~n~~g~y~C~C~~G-~~g~~~~~~C~~~---~~~~C~~~~----~g~~C~~~~~~c~~~~~C~~ 73 (147)
T 2w86_A 3 DIDECESSPCIN-GVCKNSPGSFICECSSE-STLDPTKTICIET---IKGTCWQTV----IDGRCEININGATLKSQCCS 73 (147)
T ss_dssp CCCGGGGCCSBT-SEEEEETTEEEEECCTT-EEECTTSSBEEEC---CCEEEEEEE----ETTEEEEEEEEEECHHHHHT
T ss_pred cCccCcCCCCCC-CEeECCCCCEEeECCCC-cccCCCCCeecCC---CCCcccCCC----CCCccccCCCccccCCcccc
Confidence 468898899984 79999999999999999 888643 234431 001111000 00111 222210
Q ss_pred -CCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCC-CCCCCCCCeeecCCCCCCCeeeeCCCCCccCCCCC
Q psy9427 83 -GACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRD-SNPCHPTARCEDTGATNGKVVCSCPELSVGDPYKT 160 (324)
Q Consensus 83 -~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~-~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~ 160 (324)
.....++.|. .-.|.|.|++||++.. ...|+++ |||+. +.+|.+ ++|++ +.++|+|.|++||+|+...+
T Consensus 74 ~~g~~~g~~C~--~c~~~C~C~~Gy~~~~--g~~C~di-deC~~~~~~C~~-g~C~n---~~g~y~C~C~~Gy~g~~~~~ 144 (147)
T 2w86_A 74 SLGAAWGSPCT--LCQVDPICGKGYSRIK--GTQCEDI-DECEVFPGVCKN-GLCVN---TRGSFKCQCPSGMTLDATGR 144 (147)
T ss_dssp TTCSEETTTTE--ECCCCTTTCTTEEEEE--TTEEEEC-CHHHHSTTCSSS-SEEEE---ETTEEEEECCTTCCBCTTSS
T ss_pred CcCcccCCCcc--cCCCcccCCCccccCC--CCccCcc-ccccCCCCCCCC-CEEEC---CCCCEEeeCCCCCccCCCCC
Confidence 0000111121 1237889999997411 1899988 99932 345974 69999 99999999999999987554
Q ss_pred CC
Q psy9427 161 GC 162 (324)
Q Consensus 161 ~C 162 (324)
.|
T Consensus 145 ~C 146 (147)
T 2w86_A 145 IC 146 (147)
T ss_dssp CB
T ss_pred ee
Confidence 44
No 18
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.40 E-value=9.5e-13 Score=131.69 Aligned_cols=190 Identities=21% Similarity=0.456 Sum_probs=122.1
Q ss_pred cccCCCCCCCCCCCEeeeCCCcee---eeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCCCCC----CCC
Q psy9427 13 CWNSCDGVSCGVNAVCVVNNHEAR---CFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACDS----GAC 85 (324)
Q Consensus 13 c~~~C~~~~C~~~~~C~~~~~~~~---C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~~----~~C 85 (324)
|.-+|..+||.+++.|.+..|.|. |.|++| |+|.... +.. +. + .....++|.. .+|
T Consensus 433 C~C~C~~~pc~n~~~C~~g~G~~~~G~C~C~~G-y~G~~Ce-~~~-----~~-----~-----~~~~~~~C~~~~~~~~C 495 (690)
T 3fcs_B 433 CDCACQAQAEPNSHRCNNGNGTFECGVCRCGPG-WLGSQCE-CSE-----ED-----Y-----RPSQQDECSPREGQPVC 495 (690)
T ss_dssp CSCGGGTTCCTTCTTTTTTSEEEETTEEEECTT-CCSSSSC-CSC-----C----------------CCCCSSSSSSCGG
T ss_pred cccCCcCCCCCCCCcccCCCCeEeCCceEeCCC-ccCCcee-ecc-----Cc-----c-----CCccCCcCCCCCCCCCC
Confidence 444677889999999998888888 999999 9996431 110 00 0 0011344543 358
Q ss_pred CCCCEEeeCCCCcEeeCC----CCCcCCCCCCCcccccCCCCCCC--CCCCCCCeeecCCCCCCCeeeeCCCCCccCCCC
Q psy9427 86 GTNAVCIPEDHRPVCHCP----VGTHPSPSPDVHCARESNLCRDS--NPCHPTARCEDTGATNGKVVCSCPELSVGDPYK 159 (324)
Q Consensus 86 ~~~~~C~~~~~~~~C~C~----~G~~g~~~~~~~C~~~~~~C~~~--~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~ 159 (324)
.++++|+. +.|.|+ +||.| ..|+...++|... .+|..+++|.+ ++|.|++||+|..+.
T Consensus 496 s~~G~C~~----g~C~C~~~~~~Gy~G-----~~Ce~~~~~C~~~~~~~C~~~G~C~~-------g~C~C~~Gy~G~~Ce 559 (690)
T 3fcs_B 496 SQRGECLC----GQCVCHSSDFGKITG-----KYCECDDFSCVRYKGEMCSGHGQCSC-------GDCLCDSDWTGYYCN 559 (690)
T ss_dssp GGSEEECS----SSEEECCCSSCCCBS-----TTSCBCSSCCCBSSSSBGGGSEEEET-------TEEEECTTEESSSSC
T ss_pred CCCCEEEC----CeeEeecCCCCCeeC-----CCcCcccCcCcCCCCCCCCCCCEecC-------CeeECcCCCcCCCCc
Confidence 88899973 689999 99999 7887433788321 37888899965 799999999998854
Q ss_pred CCC-CCCCCCCCCCCCCCCCCcccCCcccCCCccCCCCCCeeeeCCCCceeeC-CCCCccCCCCCCCCccccCCCCCCCC
Q psy9427 160 TGC-VPQGQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCAC-PDGFSAVGGEARVGCFREMSACAGDQ 237 (324)
Q Consensus 160 ~~C-~~~~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~~~~~C~~~~g~y~C~C-~~Gy~g~~~~~~~~C~~~~~~C~~~~ 237 (324)
| .++++|..... .+|.++++|++ .+|.| ++||+|.....-..| +..|.+++
T Consensus 560 --C~~~~~~C~~~~g------------------~~C~~~G~C~~----g~C~C~~~Gy~G~~Ce~C~~C---~~~C~~~g 612 (690)
T 3fcs_B 560 --CTTRTDTCMSSNG------------------LLCSGRGKCEC----GSCVCIQPGSYGDTCEKCPTC---PDACTFKK 612 (690)
T ss_dssp --EECCCTTTBCTTS------------------SBTSSSCEEET----TEEECCSTTCBSTTSCBCTTS---CCTTTSCC
T ss_pred --cCCCCCcccCCCC------------------CCCCCCCEEeC----CEEECCCCCccCCCcCcCCCC---CCCCCCCC
Confidence 3 24555632111 15888999976 28999 999998432211123 23444444
Q ss_pred ccCCCCCcCCCCcccCCCCCCCCCCCCCcccCCcccCCCCC
Q psy9427 238 ECLAGEEKCIGGRCRVACLSHSDCSEGERCISSLCQSPCTS 278 (324)
Q Consensus 238 ~C~~~~~~C~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~ 278 (324)
.|.. |..+ +.|..|....|...|..
T Consensus 613 ~Cv~----C~~g------------~tG~~C~~~~C~~~C~~ 637 (690)
T 3fcs_B 613 ECVE----CKKF------------DRGALHDENTCNRYCRD 637 (690)
T ss_dssp GGGT----TTTT------------CCSSSSSSSCSTTTCCC
T ss_pred Cccc----CCCC------------CccCCCCccccccccCC
Confidence 4430 2222 55666666666666654
No 19
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.38 E-value=1.4e-13 Score=115.13 Aligned_cols=90 Identities=24% Similarity=0.637 Sum_probs=66.0
Q ss_pred CCC-CCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCC-CCCCCeeecCCCCCCCeeeeCCCCCccCCCCCC
Q psy9427 84 ACG-TNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNP-CHPTARCEDTGATNGKVVCSCPELSVGDPYKTG 161 (324)
Q Consensus 84 ~C~-~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~-C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~ 161 (324)
.|. .++.|++ .|.|.|++||+| ..|+ +| ...+ |.+ ++|+ ++|+|+|++||+|..
T Consensus 71 ~C~~~~g~C~~---~~~C~C~~G~~G-----~~C~----~C-~~~~~C~~-g~C~------~~~~C~C~~G~~G~~---- 126 (169)
T 2vj2_A 71 GCSPKHGSCKL---PGDCRCQYGWQG-----LYCD----KC-IPHPGCVH-GICN------EPWQCLCETNWGGQL---- 126 (169)
T ss_dssp TCCTTTEECSS---TTCCEECTTEES-----SSSC----EE-CCCTTCSS-EECS------STTCCEECTTEETTT----
T ss_pred CCCCCCcccCC---CCeeECCCCCCC-----CCcc----cC-CCCCCCCC-CCcC------CCCEEeCCCCCCCCc----
Confidence 354 4567764 589999999998 6664 34 3333 753 4774 468999999999865
Q ss_pred CC-CCCCCCCCCCCCCCCCcccCCcccCCCccCCCCCCeeeeC-CCCceeeCCCCCcc
Q psy9427 162 CV-PQGQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAV-GKRPVCACPDGFSA 217 (324)
Q Consensus 162 C~-~~~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~~~~~C~~~-~g~y~C~C~~Gy~g 217 (324)
|. ++++|.. . .+|.++++|+++ .++|+|.|++||+|
T Consensus 127 C~~~~~~C~~-~-------------------~~C~~~g~C~~~~~~~~~C~C~~G~~G 164 (169)
T 2vj2_A 127 CDKDLNYCGT-H-------------------QPCLNGGTCSNTGPDKYQCSCPEGYSG 164 (169)
T ss_dssp TCEESCHHHH-T-------------------CCCCTTCEEEECSTTCEEEECCTTCCS
T ss_pred ccCCCCCCCC-C-------------------CCCCCCCEEcCCCCCCcEeECCCCCcC
Confidence 65 6666632 1 158889999996 89999999999997
No 20
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=99.33 E-value=1.6e-12 Score=95.28 Aligned_cols=73 Identities=27% Similarity=0.664 Sum_probs=63.4
Q ss_pred cCCCCC-CCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCcc
Q psy9427 77 IPACDS-GACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVG 155 (324)
Q Consensus 77 i~~C~~-~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g 155 (324)
||+|.. .+|.+ ++|+++.++|+|.|++||++++ ..|+++ ++|+..++|.+ ++|++ +.++|+|+|++||+|
T Consensus 5 ideC~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~g---~~C~di-deC~~~~~C~~-~~C~n---~~g~y~C~C~~G~~g 75 (82)
T 1emn_A 5 MDECKEPDVCKH-GQCINTDGSYRCECPFGYILAG---NECVDT-DECSVGNPCGN-GTCKN---VIGGFECTCEEGFEP 75 (82)
T ss_dssp CCSSSSTTSCSS-SEECCCSSCCCEECCTTEEEET---TEEEEC-CGGGTCCTTSS-SCEEE---CSSSEEECCSSSSCC
T ss_pred cccCCCCCCcCC-CEEEecCCCEEEECCCCeECCC---CccCCc-ccccCCCCCCC-CEeEC---CCCCEEeECCCCeEe
Confidence 788975 78974 8999999999999999998533 899888 99954779974 69999 999999999999998
Q ss_pred CCC
Q psy9427 156 DPY 158 (324)
Q Consensus 156 ~~~ 158 (324)
+..
T Consensus 76 ~~~ 78 (82)
T 1emn_A 76 GPM 78 (82)
T ss_dssp CSS
T ss_pred CCC
Confidence 874
No 21
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.30 E-value=8.2e-16 Score=135.94 Aligned_cols=176 Identities=9% Similarity=-0.076 Sum_probs=110.2
Q ss_pred EeeeCCCceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCCCCCCCCCCCCEEeeCCCCcEeeCCCCC
Q psy9427 27 VCVVNNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACDSGACGTNAVCIPEDHRPVCHCPVGT 106 (324)
Q Consensus 27 ~C~~~~~~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~~~~C~~~~~C~~~~~~~~C~C~~G~ 106 (324)
.+.|..|.|.+.+.|| +.+.....+... +.++. .+|.++++|++..++|.|.|++||
T Consensus 5 ~~~n~~Gg~s~~~~pg-g~~~~g~~~~~n---------------------~~~~~-~~c~ngG~C~~g~~~y~C~Cp~Gf 61 (267)
T 4fbr_A 5 LVQNQWGGSQATWNPG-GLWLIGARDKQN---------------------VVALD-IKSDDGGKTLKGTMTYNGEGPIGF 61 (267)
T ss_dssp EEEEECSSTTSCCEEE-EEEECCCCSSCC---------------------EEEEE-EECSSTTSEEEEEEEETTSCCEEE
T ss_pred eEeecCCcccCCcCCC-Cceeeccccccc---------------------cccCC-CCcCCCCeecCCCCCeEEeCCCCc
Confidence 4567788888888888 554211111110 22222 356677788877778888888888
Q ss_pred cCCCC-------------------------CCCcccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCC
Q psy9427 107 HPSPS-------------------------PDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTG 161 (324)
Q Consensus 107 ~g~~~-------------------------~~~~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~ 161 (324)
+|..- ....|+++ ++| ...||.++++|++ ...+|+|+|+.||+|..+.
T Consensus 62 ~G~~Ce~ni~ec~~~~~c~s~pC~nggtc~~G~~c~~~-~eC-~s~pC~ngG~C~~---~~~sy~C~C~~Gf~G~~Ce-- 134 (267)
T 4fbr_A 62 RGTLSSANNYTVENQWGGTSAPWQPGGVWVLGARDKQN-IVA-VSIKSNDGGKTLT---GTTTYNGEGPIGFKSEVTD-- 134 (267)
T ss_dssp EEEECSTTEEEEEEESSSTTSCEEEEEEEECCCCSSCC-EEE-EEEECSSTTSEEE---EEEEETTSCCEEEEEEECC--
T ss_pred ccccccccccccccccCcCCCcccCCCeeeccCccccc-ccc-CCCCCCCCCEEec---CCccEEeeCCCCccccCCC--
Confidence 76110 00223333 345 4567888999999 8899999999999998743
Q ss_pred CCCCCCCCC----CCCCCCCCCcccCC-cc---cCCCccCCCCCCeeeeCCCCceeeCCCCCccCCCCCCCCccccCCCC
Q psy9427 162 CVPQGQCPR----GDADCPPSSRCSGG-QC---VSVCQGACGPNALCRAVGKRPVCACPDGFSAVGGEARVGCFREMSAC 233 (324)
Q Consensus 162 C~~~~eC~~----~~~~C~~~~~C~~~-~C---~d~C~~~C~~~~~C~~~~g~y~C~C~~Gy~g~~~~~~~~C~~~~~~C 233 (324)
.++++|.. ....|....+|+.+ +| |+.+..+|.++++|++..++|+|.||+||+| ..|+..+++|
T Consensus 135 -~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~~c~ngg~C~dg~~~y~C~Cp~Gf~G------~~c~~~i~ec 207 (267)
T 4fbr_A 135 -GDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVDAKSNDGGKTLSGTMTYNGEGPIGFRG------TLTSPDTYTV 207 (267)
T ss_dssp -CCEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEEEECSSTTSEEEEEEEETTSCCEEEEE------EEEETTEEEE
T ss_pred -CCcccccccCCcCCccccCCcceecccccccccccCCCCCCCCCEeeCCCCCeEEeCCCCccc------ccccccccee
Confidence 13444311 11223333344442 33 4433348999999999999999999999998 3455545555
Q ss_pred CCCCcc
Q psy9427 234 AGDQEC 239 (324)
Q Consensus 234 ~~~~~C 239 (324)
++..-|
T Consensus 208 ~~~~~c 213 (267)
T 4fbr_A 208 ENQWGG 213 (267)
T ss_dssp EEECSC
T ss_pred ccCCCc
Confidence 444334
No 22
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.30 E-value=1.4e-12 Score=108.97 Aligned_cols=130 Identities=25% Similarity=0.506 Sum_probs=94.6
Q ss_pred CcccccCCCCC-CCCCCCEeeeCCCceeeeeCCCeeecCCCC--CCcccCCC-CCCcCCCCCceeCCCC----cccCCCC
Q psy9427 10 TLTCWNSCDGV-SCGVNAVCVVNNHEARCFCPPGSYVGDPNI--ECRQVPCV-HNHDCSTSHACDLLSH----TCIPACD 81 (324)
Q Consensus 10 ~~~c~~~C~~~-~C~~~~~C~~~~~~~~C~C~~G~y~g~~~~--~C~~~~C~-~~~~C~~~~~C~c~~~----~Ci~~C~ 81 (324)
...|...|... .|..+++|.. ..+|+|++| |+|+... .|.. .|. .++.|...+.|.|..+ .| ++|.
T Consensus 27 G~~C~~~C~~~~~c~~~g~C~~---~g~C~C~~G-~~G~~C~~~~C~~-~C~~~~g~C~~~~~C~C~~G~~G~~C-~~C~ 100 (169)
T 2vj2_A 27 GFGCNKFCRPRDDFFGHYACDQ---NGNKTCMEG-WMGPECNRAICRQ-GCSPKHGSCKLPGDCRCQYGWQGLYC-DKCI 100 (169)
T ss_dssp TTTTCEECCCEEETTEEEEECS---SCCEEECTT-EESTTSCEECCCT-TCCTTTEECSSTTCCEECTTEESSSS-CEEC
T ss_pred CCCcccccCCCCCcCCCCEeCC---CCeeECCCC-CcCCCCCCCCCCC-CCCCCCcccCCCCeeECCCCCCCCCc-ccCC
Confidence 34455556542 4666778853 347999999 9986432 2333 454 4567877888888776 44 2354
Q ss_pred CCC-CCCCCEEeeCCCCcEeeCCCCCcCCCCCCCccc-ccCCCCCCCCCCCCCCeeecCCCC-CCCeeeeCCCCCccCCC
Q psy9427 82 SGA-CGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCA-RESNLCRDSNPCHPTARCEDTGAT-NGKVVCSCPELSVGDPY 158 (324)
Q Consensus 82 ~~~-C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~-~~~~~C~~~~~C~~~~~C~~~~~~-~g~~~C~C~~G~~g~~~ 158 (324)
..+ |.+ ++|+ ++|.|.|++||+| ..|+ ++ ++|....+|.++++|++ + +++|+|+|++||+|..+
T Consensus 101 ~~~~C~~-g~C~---~~~~C~C~~G~~G-----~~C~~~~-~~C~~~~~C~~~g~C~~---~~~~~~~C~C~~G~~G~~C 167 (169)
T 2vj2_A 101 PHPGCVH-GICN---EPWQCLCETNWGG-----QLCDKDL-NYCGTHQPCLNGGTCSN---TGPDKYQCSCPEGYSGPNC 167 (169)
T ss_dssp CCTTCSS-EECS---STTCCEECTTEET-----TTTCEES-CHHHHTCCCCTTCEEEE---CSTTCEEEECCTTCCSTTS
T ss_pred CCCCCCC-CCcC---CCCEEeCCCCCCC-----CcccCCC-CCCCCCCCCCCCCEEcC---CCCCCcEeECCCCCcCcCc
Confidence 444 764 4887 5799999999998 7898 55 89943479999999999 6 78999999999999863
No 23
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=99.28 E-value=2.1e-12 Score=95.59 Aligned_cols=79 Identities=25% Similarity=0.630 Sum_probs=63.5
Q ss_pred cCCCCCCC--CCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCC--CCCCCeeecCCCCCCCeeeeCCCC
Q psy9427 77 IPACDSGA--CGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNP--CHPTARCEDTGATNGKVVCSCPEL 152 (324)
Q Consensus 77 i~~C~~~~--C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~--C~~~~~C~~~~~~~g~~~C~C~~G 152 (324)
||+|...+ |.+ ++|+++.++|+|.|++||++.......|+++ ||| ..++ |. +++|++ +.|+|+|+|++|
T Consensus 3 ideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~di-deC-~~~~~~C~-~~~C~n---~~g~y~C~C~~G 75 (86)
T 1lmj_A 3 IDECRISPDLCGR-GQCVNTPGDFECKCDEGYESGFMMMKNCMDI-DEC-QRDPLLCR-GGVCHN---TEGSYRCECPPG 75 (86)
T ss_dssp CCTTTTCSSTTTT-SCEEEETTEEEECCCSSEEECTTTSSSEEEC-CHH-HHCSSTTT-TSEEEE---ETTEEEEESCTT
T ss_pred cccccCCCCCCCC-CEEECCCCCEEeeCCCCcCccCCCCCccCCc-ccc-cCCCCcCC-CCEeEc---CCCCEEEECcCC
Confidence 78887655 864 5999999999999999999653322889988 999 5454 75 689999 999999999999
Q ss_pred CccCCCCCCC
Q psy9427 153 SVGDPYKTGC 162 (324)
Q Consensus 153 ~~g~~~~~~C 162 (324)
|++......|
T Consensus 76 ~~~~~~~~~C 85 (86)
T 1lmj_A 76 HQLSPNISAC 85 (86)
T ss_dssp SCCCSSSCCC
T ss_pred cccCCCCCcc
Confidence 9988754333
No 24
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=99.25 E-value=4.9e-12 Score=92.69 Aligned_cols=74 Identities=26% Similarity=0.689 Sum_probs=60.4
Q ss_pred ccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCcccCCcccCCCccCCC
Q psy9427 116 CARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQCPRGDADCPPSSRCSGGQCVSVCQGACG 195 (324)
Q Consensus 116 C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~~~~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~ 195 (324)
|+++ |+|+..++|. +++|++ +.++|+|.|++||++++ ..|.+++||.. .. +|.
T Consensus 2 C~di-deC~~~~~C~-~g~C~n---~~g~y~C~C~~Gy~~~g--~~C~dideC~~-~~-------------------~C~ 54 (82)
T 1emn_A 2 AVDM-DECKEPDVCK-HGQCIN---TDGSYRCECPFGYILAG--NECVDTDECSV-GN-------------------PCG 54 (82)
T ss_dssp CCCC-CSSSSTTSCS-SSEECC---CSSCCCEECCTTEEEET--TEEEECCGGGT-CC-------------------TTS
T ss_pred CCcc-ccCCCCCCcC-CCEEEe---cCCCEEEECCCCeECCC--CccCCcccccC-CC-------------------CCC
Confidence 5677 9995457896 489999 99999999999998644 45889998843 22 465
Q ss_pred CCCeeeeCCCCceeeCCCCCcc
Q psy9427 196 PNALCRAVGKRPVCACPDGFSA 217 (324)
Q Consensus 196 ~~~~C~~~~g~y~C~C~~Gy~g 217 (324)
+ ++|+++.++|+|.|++||+|
T Consensus 55 ~-~~C~n~~g~y~C~C~~G~~g 75 (82)
T 1emn_A 55 N-GTCKNVIGGFECTCEEGFEP 75 (82)
T ss_dssp S-SCEEECSSSEEECCSSSSCC
T ss_pred C-CEeECCCCCEEeECCCCeEe
Confidence 4 68999999999999999987
No 25
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=99.22 E-value=2e-11 Score=95.13 Aligned_cols=93 Identities=20% Similarity=0.468 Sum_probs=67.2
Q ss_pred ccCCCCCC--------CCCCCEeeeCCCceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCCCCCC--
Q psy9427 14 WNSCDGVS--------CGVNAVCVVNNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACDSG-- 83 (324)
Q Consensus 14 ~~~C~~~~--------C~~~~~C~~~~~~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~~~-- 83 (324)
+|+|+.+| |.++++|+++.++|+|.|++| |+|.. |+++. . +++|...
T Consensus 6 ~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G-~~G~~---C~~~~---------~----------~~~C~~~~~ 62 (114)
T 1aut_L 6 GDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSG-WEGRF---CQREV---------S----------FLNCSLDNG 62 (114)
T ss_dssp --CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTT-EESTT---SCEEC---------C----------SSSSSSGGG
T ss_pred cccccCCCccccccccCCCcCCCCCCCCCcEeeCCCC-CcCCC---cCcCC---------c----------CCcCcCCCC
Confidence 56788888 999999999999999999999 99853 44410 0 2356532
Q ss_pred CCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeec
Q psy9427 84 ACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCED 137 (324)
Q Consensus 84 ~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~ 137 (324)
.|. ++|+++.++|+|.|++||+|.... +.|+++ ...||...++++.
T Consensus 63 ~C~--~~C~n~~g~y~C~C~~G~~~~~~g-~~C~~~-----~~~pC~~~~~~i~ 108 (114)
T 1aut_L 63 GCT--HYCLEEVGWRRCSCAPGYKLGDDL-LQCHPA-----VKFPCGRPWKRME 108 (114)
T ss_dssp GCS--SEEEECSSSEEEECCTTEEECTTS-SCEEEC-----SSSCTTCCC----
T ss_pred CCC--CEeECCCCCEEeECCCCeeECCCC-CccCcC-----cccCCCCCCccCC
Confidence 343 399999999999999999976544 788876 4458887777765
No 26
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=99.20 E-value=5e-12 Score=93.70 Aligned_cols=80 Identities=23% Similarity=0.463 Sum_probs=63.3
Q ss_pred cCCCCCCC--CCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCC--CC
Q psy9427 77 IPACDSGA--CGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCP--EL 152 (324)
Q Consensus 77 i~~C~~~~--C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~--~G 152 (324)
||+|...+ | ++++|+++.++|+|.|++||++++.. ..|+++ +|| ..++|. ++|++ ++|+|+|+|+ .|
T Consensus 3 ideC~~~~~~C-~~~~C~n~~g~y~C~C~~G~~~~~~g-~~C~di-deC-~~~~C~--~~C~n---~~g~y~C~C~g~~G 73 (87)
T 1z6c_A 3 VDECSLKPSIC-GTAVCKNIPGDFECECPEGYRYNLKS-KSCEDI-DEC-SENMCA--QLCVN---YPGGYTCYCDGKKG 73 (87)
T ss_dssp SCSSSSSSSSB-TTSSCCCBTTBCCCSSSTTCEEETTT-TEEECC-CHH-HHSCCS--SEECC---CSSSCCEECCSSSC
T ss_pred cccccCCCCCC-CCCEeECCCCCEEEECCCCceECCCC-CcCCCc-Cee-CCCCCC--CEEEc---cCCCEEEECCCCcC
Confidence 78887766 8 67899999999999999999965433 789888 999 678895 79999 9999999995 56
Q ss_pred CccCCCCCCCCCC
Q psy9427 153 SVGDPYKTGCVPQ 165 (324)
Q Consensus 153 ~~g~~~~~~C~~~ 165 (324)
|........|.++
T Consensus 74 ~~~~~~~~~C~di 86 (87)
T 1z6c_A 74 FKLAQDQKSCEVV 86 (87)
T ss_dssp CBCCTTSSSCBCC
T ss_pred CcccCCCCcceEC
Confidence 6544433345544
No 27
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=99.19 E-value=1.5e-11 Score=90.91 Aligned_cols=74 Identities=28% Similarity=0.655 Sum_probs=59.9
Q ss_pred cccCCCCCC--CCCCCEeeeCCCceeeeeCCCeeecCC--CCCCcccCCCCCCcCCCCCceeCCCCcccCCCCCCC--CC
Q psy9427 13 CWNSCDGVS--CGVNAVCVVNNHEARCFCPPGSYVGDP--NIECRQVPCVHNHDCSTSHACDLLSHTCIPACDSGA--CG 86 (324)
Q Consensus 13 c~~~C~~~~--C~~~~~C~~~~~~~~C~C~~G~y~g~~--~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~~~~--C~ 86 (324)
.+|+|...| |.+ ++|+++.++|+|.|++| |++.. ...|.+ ||+|...+ |.
T Consensus 2 dideC~~~~~~C~~-g~C~n~~g~y~C~C~~G-y~~~~~~g~~C~d----------------------ideC~~~~~~C~ 57 (86)
T 1lmj_A 2 DIDECRISPDLCGR-GQCVNTPGDFECKCDEG-YESGFMMMKNCMD----------------------IDECQRDPLLCR 57 (86)
T ss_dssp CCCTTTTCSSTTTT-SCEEEETTEEEECCCSS-EEECTTTSSSEEE----------------------CCHHHHCSSTTT
T ss_pred ccccccCCCCCCCC-CEEECCCCCEEeeCCCC-cCccCCCCCccCC----------------------cccccCCCCcCC
Confidence 367888765 964 59999999999999999 88642 345666 88887655 64
Q ss_pred CCCEEeeCCCCcEeeCCCCCcCCCC
Q psy9427 87 TNAVCIPEDHRPVCHCPVGTHPSPS 111 (324)
Q Consensus 87 ~~~~C~~~~~~~~C~C~~G~~g~~~ 111 (324)
+++|+++.++|.|.|++||++++.
T Consensus 58 -~~~C~n~~g~y~C~C~~G~~~~~~ 81 (86)
T 1lmj_A 58 -GGVCHNTEGSYRCECPPGHQLSPN 81 (86)
T ss_dssp -TSEEEEETTEEEEESCTTSCCCSS
T ss_pred -CCEeEcCCCCEEEECcCCcccCCC
Confidence 589999999999999999998654
No 28
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.19 E-value=1.4e-11 Score=92.10 Aligned_cols=79 Identities=18% Similarity=0.392 Sum_probs=63.2
Q ss_pred ceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCCCCCCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCC
Q psy9427 34 EARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPD 113 (324)
Q Consensus 34 ~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~ 113 (324)
+|+|.|++| |+|.-.+ +++|...|| ++..++|.|.|++||+
T Consensus 1 sy~C~C~~g-~~g~~c~--------------------------~~~c~~~pC------~n~~~~y~C~C~~G~~------ 41 (91)
T 1tpg_A 1 SYQVICRDE-KTQMIYQ--------------------------QHQSWLRPV------LRSNRVEYCWCNSGRA------ 41 (91)
T ss_dssp CCCCCCBCS-SSCCBCC--------------------------SSCEEEEEC------SSSSCEEEEECSSSCC------
T ss_pred CeeeECCCC-CcCCeEC--------------------------CCcccCCcc------ccCCCCcEeECCCCCc------
Confidence 589999999 8884221 566654444 4557899999999996
Q ss_pred Cccc--ccCCCCCCCCCCCCCCeeecCCCCC--CCeeeeCCCCCccCC
Q psy9427 114 VHCA--RESNLCRDSNPCHPTARCEDTGATN--GKVVCSCPELSVGDP 157 (324)
Q Consensus 114 ~~C~--~~~~~C~~~~~C~~~~~C~~~~~~~--g~~~C~C~~G~~g~~ 157 (324)
.|+ ++ ++| ..+||.++++|++ +. ++|+|.|++||+|..
T Consensus 42 -~C~~~~~-~~C-~~~pC~ngg~C~~---~~~~~~~~C~C~~G~~G~~ 83 (91)
T 1tpg_A 42 -QCHSVPV-KSC-SEPRCFNGGTCQQ---ALYFSDFVCQCPEGFAGKS 83 (91)
T ss_dssp -BCCEECE-EEC-SSCCSCTTCEEEE---ESSSSCEEEECCTTCBSSS
T ss_pred -ccccCcC-Ccc-cCCCCCCCCEeec---CCCCCCeEeECCCCCcCCc
Confidence 465 45 899 7789999999998 77 899999999999876
No 29
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.17 E-value=3.3e-11 Score=120.58 Aligned_cols=159 Identities=23% Similarity=0.518 Sum_probs=104.0
Q ss_pred CCCCCCCCCCCEEeeCCCCcE---eeCCCCCcCCCCCCCcccccC--------CCCCCC---CCCCCCCeeecCCCCCCC
Q psy9427 79 ACDSGACGTNAVCIPEDHRPV---CHCPVGTHPSPSPDVHCARES--------NLCRDS---NPCHPTARCEDTGATNGK 144 (324)
Q Consensus 79 ~C~~~~C~~~~~C~~~~~~~~---C~C~~G~~g~~~~~~~C~~~~--------~~C~~~---~~C~~~~~C~~~~~~~g~ 144 (324)
+|...+|.+++.|.+..+.|. |.|++||+| ..|+..+ ++|... .+|..+++|++
T Consensus 436 ~C~~~pc~n~~~C~~g~G~~~~G~C~C~~Gy~G-----~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~------- 503 (690)
T 3fcs_B 436 ACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLG-----SQCECSEEDYRPSQQDECSPREGQPVCSQRGECLC------- 503 (690)
T ss_dssp GGGTTCCTTCTTTTTTSEEEETTEEEECTTCCS-----SSSCCSCC------CCCCSSSSSSCGGGGSEEECS-------
T ss_pred CCcCCCCCCCCcccCCCCeEeCCceEeCCCccC-----CceeeccCccCCccCCcCCCCCCCCCCCCCCEEEC-------
Confidence 566677888888887777777 999999999 6775432 567322 25888889965
Q ss_pred eeeeCC----CCCccCCCCCCCCCCCCCCCCCCCCCCCCcccCCcccCCCccCCCCCCeeeeCCCCceeeCCCCCccCCC
Q psy9427 145 VVCSCP----ELSVGDPYKTGCVPQGQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCACPDGFSAVGG 220 (324)
Q Consensus 145 ~~C~C~----~G~~g~~~~~~C~~~~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~~~~~C~~~~g~y~C~C~~Gy~g~~~ 220 (324)
++|.|+ +||+|..++ .++.+|..... .+|.++++|++ ++|.|++||+|...
T Consensus 504 g~C~C~~~~~~Gy~G~~Ce---~~~~~C~~~~~------------------~~C~~~G~C~~----g~C~C~~Gy~G~~C 558 (690)
T 3fcs_B 504 GQCVCHSSDFGKITGKYCE---CDDFSCVRYKG------------------EMCSGHGQCSC----GDCLCDSDWTGYYC 558 (690)
T ss_dssp SSEEECCCSSCCCBSTTSC---BCSSCCCBSSS------------------SBGGGSEEEET----TEEEECTTEESSSS
T ss_pred CeeEeecCCCCCeeCCCcC---cccCcCcCCCC------------------CCCCCCCEecC----CeeECcCCCcCCCC
Confidence 599999 999998743 14555532111 15777899977 79999999998433
Q ss_pred CCCCCccccCCCCCCC--CccCCCCCcCCCCcccCCC-CCCCCCCCCCcccC-CcccCCCCCCCCCCC
Q psy9427 221 EARVGCFREMSACAGD--QECLAGEEKCIGGRCRVAC-LSHSDCSEGERCIS-SLCQSPCTSHSQCPT 284 (324)
Q Consensus 221 ~~~~~C~~~~~~C~~~--~~C~~~~~~C~~~~C~~~C-~~~~~C~~~~~C~~-~~C~~~C~~~~~C~~ 284 (324)
. |...+++|... ..|. .+..|++++|. | ..+ +.|..|.. ..|.++|.+++.|..
T Consensus 559 e----C~~~~~~C~~~~g~~C~-~~G~C~~g~C~--C~~~G---y~G~~Ce~C~~C~~~C~~~g~Cv~ 616 (690)
T 3fcs_B 559 N----CTTRTDTCMSSNGLLCS-GRGKCECGSCV--CIQPG---SYGDTCEKCPTCPDACTFKKECVE 616 (690)
T ss_dssp C----EECCCTTTBCTTSSBTS-SSCEEETTEEE--CCSTT---CBSTTSCBCTTSCCTTTSCCGGGT
T ss_pred c----cCCCCCcccCCCCCCCC-CCCEEeCCEEE--CCCCC---ccCCCcCcCCCCCCCCCCCCCccc
Confidence 2 21124455432 3454 33345555442 3 222 45677776 677788888888853
No 30
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=99.16 E-value=2.9e-11 Score=94.25 Aligned_cols=79 Identities=24% Similarity=0.381 Sum_probs=61.7
Q ss_pred cCCCCCCC--------CCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccC--CCCCCC-CCCCCCCeeecCCCCCCCe
Q psy9427 77 IPACDSGA--------CGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARES--NLCRDS-NPCHPTARCEDTGATNGKV 145 (324)
Q Consensus 77 i~~C~~~~--------C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~--~~C~~~-~~C~~~~~C~~~~~~~g~~ 145 (324)
+|+|...| |.++++|+++.++|.|.|++||+| ..|+++. ++|... ..|. .+|++ +.++|
T Consensus 6 ~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~~G-----~~C~~~~~~~~C~~~~~~C~--~~C~n---~~g~y 75 (114)
T 1aut_L 6 GDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEG-----RFCQREVSFLNCSLDNGGCT--HYCLE---EVGWR 75 (114)
T ss_dssp --CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTTEES-----TTSCEECCSSSSSSGGGGCS--SEEEE---CSSSE
T ss_pred cccccCCCccccccccCCCcCCCCCCCCCcEeeCCCCCcC-----CCcCcCCcCCcCcCCCCCCC--CEeEC---CCCCE
Confidence 56676666 889999999999999999999999 7788752 368321 2453 49999 99999
Q ss_pred eeeCCCCCccCCCCCCCCCC
Q psy9427 146 VCSCPELSVGDPYKTGCVPQ 165 (324)
Q Consensus 146 ~C~C~~G~~g~~~~~~C~~~ 165 (324)
+|+|++||+|......|+++
T Consensus 76 ~C~C~~G~~~~~~g~~C~~~ 95 (114)
T 1aut_L 76 RCSCAPGYKLGDDLLQCHPA 95 (114)
T ss_dssp EEECCTTEEECTTSSCEEEC
T ss_pred EeECCCCeeECCCCCccCcC
Confidence 99999999987766667654
No 31
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=99.16 E-value=2.3e-11 Score=99.07 Aligned_cols=81 Identities=23% Similarity=0.550 Sum_probs=67.5
Q ss_pred cCCCCCCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCC-CCCCCCCee-ecCCCCCCCeeeeCCCCCc
Q psy9427 77 IPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDS-NPCHPTARC-EDTGATNGKVVCSCPELSV 154 (324)
Q Consensus 77 i~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~-~~C~~~~~C-~~~~~~~g~~~C~C~~G~~ 154 (324)
||+|.++||.++++|++..++|.|.|++||+| ..|+++ ++|... .+|.. +| ++ +.|+|+|.|++||+
T Consensus 48 ideC~~~pC~n~g~C~~~~~~y~C~C~~G~~G-----~~C~~~-deC~~~~~~C~~--~C~~n---~~g~y~C~C~~Gy~ 116 (146)
T 1x7a_L 48 GDQCEPNPCLNGGLCKDDINSYECWCQVGFEG-----KNCELD-ATCNIKNGRCKQ--FCKTG---ADSKVLCSCTTGYR 116 (146)
T ss_dssp --CCSSCSSCTTCEEEECSSCEEEECCSSEES-----TTTCEE-CCTTSGGGSCSS--BCCCC---SSSCCCCBCCTTEE
T ss_pred cCcCCCCCCCCCCEeECCCCCEEEecCCCCcC-----CcCCCC-ccccCCCCCCcC--CCCCC---CCCCEEeEcCCCcE
Confidence 88999999999999999999999999999998 899998 999432 26753 99 99 99999999999999
Q ss_pred cCCCCCCCCCCCCC
Q psy9427 155 GDPYKTGCVPQGQC 168 (324)
Q Consensus 155 g~~~~~~C~~~~eC 168 (324)
+...+..|.++++.
T Consensus 117 l~~dG~~C~~~~~~ 130 (146)
T 1x7a_L 117 LAPDQKSCKPAVPF 130 (146)
T ss_dssp ECTTSSSEEECSSS
T ss_pred eCCCCCcCCCCCCC
Confidence 76655668776543
No 32
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.14 E-value=8e-11 Score=108.24 Aligned_cols=143 Identities=28% Similarity=0.748 Sum_probs=69.3
Q ss_pred CCCCCCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccCC
Q psy9427 78 PACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDP 157 (324)
Q Consensus 78 ~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~ 157 (324)
++|. .+|.++++|.+ .+.|.|++||+| ..|+. ++| . .+|.++++|++ .++|.|++||+|..
T Consensus 149 ~~C~-~~C~~~G~C~~---~~~C~C~~G~~G-----~~C~~--~~C-~-~~C~~~G~C~~------~~~C~C~~G~~G~~ 209 (324)
T 2ygq_A 149 AECP-GGCRNGGFCNE---RRICECPDGFHG-----PHCEK--ALC-T-PRCMNGGLCVT------PGFCICPPGFYGVN 209 (324)
T ss_dssp CCCS-SCCCSSCEECT---TSCEECCTTEES-----SSSCE--ESS-S-SCCCTTCEECS------SCCEECCTTCBTTT
T ss_pred CCCC-CCCCCCCEECC---CCeEECCCCCcC-----CCCCC--CCC-C-CCCCCCCEEcC------CCEEeCCCCccCCC
Confidence 3453 67888999975 589999999999 77875 457 3 47988999975 37899999999886
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCcccCCcccCCCccCCCCCCeeeeCCCCceeeCCCCCccCCCCCCCCccccCCCCCCCC
Q psy9427 158 YKTGCVPQGQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCACPDGFSAVGGEARVGCFREMSACAGDQ 237 (324)
Q Consensus 158 ~~~~C~~~~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~~~~~C~~~~g~y~C~C~~Gy~g~~~~~~~~C~~~~~~C~~~~ 237 (324)
+ .. .+| ..+|.++++|++. ++|.|++||+|.... ...| ..+|.+++
T Consensus 210 C----~~-~~C----------------------~~~C~~~G~C~~~---~~C~C~~G~~G~~C~-~~~C---~~~C~~~g 255 (324)
T 2ygq_A 210 C----DK-ANC----------------------STTCFNGGTCFYP---GKCICPPGLEGEQCE-ISKC---PQPCRNGG 255 (324)
T ss_dssp T----CB-CCC----------------------SSCCCSSCCBSCS---SCBCCCTTCCTTTTC----------------
T ss_pred c----cc-CcC----------------------CCCCCCCCeeCCC---CeeeCCCCccCCCCC-cCcC---CCcCCCCC
Confidence 3 21 223 1247778888763 689999999873221 1123 12333334
Q ss_pred ccCCCCCcCCCCcccCCCCCCCCCCCCCcccCCcccCCCCCCCCCCC
Q psy9427 238 ECLAGEEKCIGGRCRVACLSHSDCSEGERCISSLCQSPCTSHSQCPT 284 (324)
Q Consensus 238 ~C~~~~~~C~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~~~C~~ 284 (324)
.|. .. ++| .|..+ +.|..|....|..+|.+++.|..
T Consensus 256 ~C~-~~-----~~C--~C~~G---~~G~~C~~~~C~~~C~~~g~C~~ 291 (324)
T 2ygq_A 256 KCI-GK-----SKC--KCSKG---YQGDLCSKPVCEPGCGAHGTCHE 291 (324)
T ss_dssp -----------------------------------------------
T ss_pred EEC-CC-----CEE--ECCCC---CcCCCCcCCCCCCCCCCCCEECC
Confidence 442 11 111 11111 44567776777777877777764
No 33
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=99.13 E-value=6.8e-11 Score=96.23 Aligned_cols=86 Identities=20% Similarity=0.568 Sum_probs=63.7
Q ss_pred cCCcccccCCCCCCCCCCCEeeeCCCceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCCCCCC--CC
Q psy9427 8 YLTLTCWNSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACDSG--AC 85 (324)
Q Consensus 8 ~~~~~c~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~~~--~C 85 (324)
|..-.-+|+|..+||.++++|++..++|+|.|++| |+|. .|.+ +++|... +|
T Consensus 42 ~~~c~dideC~~~pC~n~g~C~~~~~~y~C~C~~G-~~G~---~C~~----------------------~deC~~~~~~C 95 (146)
T 1x7a_L 42 WKQYVDGDQCEPNPCLNGGLCKDDINSYECWCQVG-FEGK---NCEL----------------------DATCNIKNGRC 95 (146)
T ss_dssp --------CCSSCSSCTTCEEEECSSCEEEECCSS-EEST---TTCE----------------------ECCTTSGGGSC
T ss_pred hccCCCcCcCCCCCCCCCCEeECCCCCEEEecCCC-CcCC---cCCC----------------------CccccCCCCCC
Confidence 44344567899999999999999999999999999 9874 4665 6677643 46
Q ss_pred CCCCEE-eeCCCCcEeeCCCCCcCCCCCCCcccccCCCC
Q psy9427 86 GTNAVC-IPEDHRPVCHCPVGTHPSPSPDVHCARESNLC 123 (324)
Q Consensus 86 ~~~~~C-~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C 123 (324)
.. +| +++.++|.|.|++||++.+.. ..|+++ ++.
T Consensus 96 ~~--~C~~n~~g~y~C~C~~Gy~l~~dG-~~C~~~-~~~ 130 (146)
T 1x7a_L 96 KQ--FCKTGADSKVLCSCTTGYRLAPDQ-KSCKPA-VPF 130 (146)
T ss_dssp SS--BCCCCSSSCCCCBCCTTEEECTTS-SSEEEC-SSS
T ss_pred cC--CCCCCCCCCEEeEcCCCcEeCCCC-CcCCCC-CCC
Confidence 53 89 899999999999999954433 789887 443
No 34
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.12 E-value=4.3e-11 Score=89.40 Aligned_cols=77 Identities=21% Similarity=0.418 Sum_probs=60.9
Q ss_pred CcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCCCC--CCCCCCCCCCC
Q psy9427 97 RPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCV--PQGQCPRGDAD 174 (324)
Q Consensus 97 ~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~--~~~eC~~~~~~ 174 (324)
+|.|.|.+||+| ..|+ + ++| ..+|| ++ ..++|+|+|++||+ .|. ++++|..
T Consensus 1 sy~C~C~~g~~g-----~~c~-~-~~c-~~~pC------~n---~~~~y~C~C~~G~~------~C~~~~~~~C~~---- 53 (91)
T 1tpg_A 1 SYQVICRDEKTQ-----MIYQ-Q-HQS-WLRPV------LR---SNRVEYCWCNSGRA------QCHSVPVKSCSE---- 53 (91)
T ss_dssp CCCCCCBCSSSC-----CBCC-S-SCE-EEEEC------SS---SSCEEEEECSSSCC------BCCEECEEECSS----
T ss_pred CeeeECCCCCcC-----CeEC-C-Ccc-cCCcc------cc---CCCCcEeECCCCCc------ccccCcCCcccC----
Confidence 589999999999 6663 4 777 44454 56 77899999999996 364 5666632
Q ss_pred CCCCCcccCCcccCCCccCCCCCCeeeeCC--CCceeeCCCCCcc
Q psy9427 175 CPPSSRCSGGQCVSVCQGACGPNALCRAVG--KRPVCACPDGFSA 217 (324)
Q Consensus 175 C~~~~~C~~~~C~d~C~~~C~~~~~C~~~~--g~y~C~C~~Gy~g 217 (324)
.+|.++++|++.. ++|+|.|++||+|
T Consensus 54 -----------------~pC~ngg~C~~~~~~~~~~C~C~~G~~G 81 (91)
T 1tpg_A 54 -----------------PRCFNGGTCQQALYFSDFVCQCPEGFAG 81 (91)
T ss_dssp -----------------CCSCTTCEEEEESSSSCEEEECCTTCBS
T ss_pred -----------------CCCCCCCEeecCCCCCCeEeECCCCCcC
Confidence 1588999999987 9999999999997
No 35
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=99.07 E-value=5.1e-12 Score=104.73 Aligned_cols=112 Identities=22% Similarity=0.498 Sum_probs=74.8
Q ss_pred cCCCC-CCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCC--CCC-CCCC--CCCCeeecCCCCCC----Cee
Q psy9427 77 IPACD-SGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNL--CRD-SNPC--HPTARCEDTGATNG----KVV 146 (324)
Q Consensus 77 i~~C~-~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~--C~~-~~~C--~~~~~C~~~~~~~g----~~~ 146 (324)
||||+ +++|. +++|+++.++|+|.|++||++++.. ..|+++ ++ |.. ..+| ..+++|++ +.+ +|+
T Consensus 3 ideC~~~~~C~-~~~C~n~~gsy~C~C~~Gy~~~~~g-~~C~d~-~~~~C~~~~~~c~~~~~~~C~~---~~~~~~~~~~ 76 (162)
T 1uzk_A 3 VNECLDPTTCI-SGNCVNTPGSYICDCPPDFELNPTR-VGCVDT-RSGNCYLDIRPRGDNGDTACSN---EIGVGVSKAS 76 (162)
T ss_dssp CCGGGSTTSSB-TSEEEEETTEEEEECCTTCEECTTS-SBEECC-CCEEEEEEC----------CEE---EEEEEECHHH
T ss_pred cccCCCCCCCC-CCEeECCCCCEEEeCCCCCeECCCC-CcccCC-CCCcccCCCcccCCCCCCcccC---CcCCcccCce
Confidence 78887 47896 6899999999999999999965433 889877 76 732 1234 34789998 777 799
Q ss_pred eeCCCCCcc-CCCCCCCCCCCCCCCCCCCCCCCCcccCCcccCCCccCCCCCCeeeeCCCCceeeCCC--CCccCCCCCC
Q psy9427 147 CSCPELSVG-DPYKTGCVPQGQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCACPD--GFSAVGGEAR 223 (324)
Q Consensus 147 C~C~~G~~g-~~~~~~C~~~~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~~~~~C~~~~g~y~C~C~~--Gy~g~~~~~~ 223 (324)
|.|++||.. .+ |. .|.. +..++|+|.|++ ||++. ...
T Consensus 77 C~C~~G~~~~~~----C~-----------------------------~C~~-----~~~~~y~C~C~~g~G~~~~--~~~ 116 (162)
T 1uzk_A 77 CCCSLGKAWGTP----CE-----------------------------MCPA-----VNTSEYKILCPGGEGFRPN--PIT 116 (162)
T ss_dssp HHTTTCCEETTT----TE-----------------------------ECCC-----TTSHHHHHHCTTCTTEEEC--TTT
T ss_pred eeCCCCCCcCCC----cc-----------------------------cCCC-----CCCCCceeECCCCCCcccC--CCC
Confidence 999999983 22 21 0111 245789999998 99873 222
Q ss_pred CCccccCCCCCC
Q psy9427 224 VGCFREMSACAG 235 (324)
Q Consensus 224 ~~C~~~~~~C~~ 235 (324)
..|++ +++|..
T Consensus 117 ~~c~d-ideC~~ 127 (162)
T 1uzk_A 117 VILED-IDECQE 127 (162)
T ss_dssp CCEEE-CCHHHH
T ss_pred CccCc-cccccC
Confidence 34666 655543
No 36
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=99.07 E-value=3.3e-11 Score=92.81 Aligned_cols=76 Identities=28% Similarity=0.607 Sum_probs=30.2
Q ss_pred cCCCCC--CCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCc
Q psy9427 77 IPACDS--GACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSV 154 (324)
Q Consensus 77 i~~C~~--~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~ 154 (324)
+++|.. ..|. ++|+++.++|.|.|++||+|... ..|+++ |||...++|. ++|++ +.++|+|.|++||+
T Consensus 29 ~neC~~~~~~C~--~~C~n~~g~y~C~C~~Gy~g~~g--~~C~di-deC~~~~~C~--~~C~n---~~gsy~C~C~~Gy~ 98 (107)
T 2w2n_E 29 TNECLDNNGGCS--YVCNDLKIGYECLCPDGFQLVAQ--RRCEDI-DECQDPDTCS--QLCVN---LEGGYKCQCEEGFQ 98 (107)
T ss_dssp CCGGGTGGGGCS--SEEECCSBSCEEECCTTCEEETT--TEEEC------------------------------------
T ss_pred CccCcCCCCCCC--CEeEeCCCCeEEECCCCccccCC--Cccccc-cccCCCCCcC--Ceeec---CCCCEEEECCCCce
Confidence 677764 3453 69999999999999999998432 789988 9995457885 79999 99999999999999
Q ss_pred cCCCCCCC
Q psy9427 155 GDPYKTGC 162 (324)
Q Consensus 155 g~~~~~~C 162 (324)
++.....|
T Consensus 99 ~~~d~~~C 106 (107)
T 2w2n_E 99 LDPHTKAC 106 (107)
T ss_dssp --------
T ss_pred ECCCCCcc
Confidence 87754333
No 37
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=99.07 E-value=7.6e-11 Score=95.49 Aligned_cols=82 Identities=20% Similarity=0.338 Sum_probs=66.5
Q ss_pred cCCCCCCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCC---eeecCCCCCC-CeeeeCCCC
Q psy9427 77 IPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTA---RCEDTGATNG-KVVCSCPEL 152 (324)
Q Consensus 77 i~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~---~C~~~~~~~g-~~~C~C~~G 152 (324)
+|+|.++||.++++|+++.++|.|.|++||+| ..|++.++++ ...++.+++ +|++ +.+ +|+|.|++|
T Consensus 47 id~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G-----~~C~~~~~~c-~~c~~~~~~C~~~C~~---~~g~~y~C~C~~G 117 (142)
T 2c4f_L 47 GDQCASSPCQNGGSCKDQLQSYICFCLPAFEG-----RNCETHKDDQ-LICVNENGGCEQYCSD---HTGTKRSCRCHEG 117 (142)
T ss_dssp CCGGGGCCCCTTCEEEEETTEEEEECCTTEES-----TTSCEEGGGC-CSTTTGGGGCSSEEEC---CTTSCCEEECCTT
T ss_pred cCcCcCCCcCCCCEEeCCCCCEEeeCCCCccC-----CccccCcccc-ccccCCCCCccCEeEC---CCCCCEEEECCCC
Confidence 78998899999999999999999999999998 8898632665 333443344 9999 899 999999999
Q ss_pred CccCCCCCCCCCCCC
Q psy9427 153 SVGDPYKTGCVPQGQ 167 (324)
Q Consensus 153 ~~g~~~~~~C~~~~e 167 (324)
|++...+..|.++++
T Consensus 118 y~l~~dG~~C~~~~e 132 (142)
T 2c4f_L 118 YSLLADGVSCTPTVE 132 (142)
T ss_dssp EEECTTSSCEEESSS
T ss_pred ceECCCCCCCCCCCc
Confidence 997665566877665
No 38
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=99.06 E-value=5.2e-11 Score=88.14 Aligned_cols=70 Identities=26% Similarity=0.580 Sum_probs=56.9
Q ss_pred cccCCCCCC--CCCCCEeeeCCCceeeeeCCCeeecCC-CCCCcccCCCCCCcCCCCCceeCCCCcccCCCCCCCCCCCC
Q psy9427 13 CWNSCDGVS--CGVNAVCVVNNHEARCFCPPGSYVGDP-NIECRQVPCVHNHDCSTSHACDLLSHTCIPACDSGACGTNA 89 (324)
Q Consensus 13 c~~~C~~~~--C~~~~~C~~~~~~~~C~C~~G~y~g~~-~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~~~~C~~~~ 89 (324)
-+|+|..+| | ++++|+++.++|+|.|++| |++++ ...|.+ |++|..++|. +
T Consensus 2 dideC~~~~~~C-~~~~C~n~~g~y~C~C~~G-~~~~~~g~~C~d----------------------ideC~~~~C~--~ 55 (87)
T 1z6c_A 2 DVDECSLKPSIC-GTAVCKNIPGDFECECPEG-YRYNLKSKSCED----------------------IDECSENMCA--Q 55 (87)
T ss_dssp CSCSSSSSSSSB-TTSSCCCBTTBCCCSSSTT-CEEETTTTEEEC----------------------CCHHHHSCCS--S
T ss_pred ccccccCCCCCC-CCCEeECCCCCEEEECCCC-ceECCCCCcCCC----------------------cCeeCCCCCC--C
Confidence 367898877 8 7889999999999999999 88643 235655 8888878886 7
Q ss_pred EEeeCCCCcEeeCC--CCCcC
Q psy9427 90 VCIPEDHRPVCHCP--VGTHP 108 (324)
Q Consensus 90 ~C~~~~~~~~C~C~--~G~~g 108 (324)
+|+++.++|.|.|+ +||..
T Consensus 56 ~C~n~~g~y~C~C~g~~G~~~ 76 (87)
T 1z6c_A 56 LCVNYPGGYTCYCDGKKGFKL 76 (87)
T ss_dssp EECCCSSSCCEECCSSSCCBC
T ss_pred EEEccCCCEEEECCCCcCCcc
Confidence 99999999999995 55554
No 39
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=99.01 E-value=2.8e-10 Score=92.18 Aligned_cols=84 Identities=18% Similarity=0.382 Sum_probs=62.6
Q ss_pred ccccCCCCCCCCCCCEeeeCCCceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCCCCCCCCCCCC--
Q psy9427 12 TCWNSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACDSGACGTNA-- 89 (324)
Q Consensus 12 ~c~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~~~~C~~~~-- 89 (324)
.-+|+|..+||.++++|++..++|+|.|++| |+|. .|... +++|..-++.+++
T Consensus 45 ~did~C~~~pC~n~g~C~~~~g~y~C~C~~G-~~G~---~C~~~---------------------~~~c~~c~~~~~~C~ 99 (142)
T 2c4f_L 45 SDGDQCASSPCQNGGSCKDQLQSYICFCLPA-FEGR---NCETH---------------------KDDQLICVNENGGCE 99 (142)
T ss_dssp TTCCGGGGCCCCTTCEEEEETTEEEEECCTT-EEST---TSCEE---------------------GGGCCSTTTGGGGCS
T ss_pred CccCcCcCCCcCCCCEEeCCCCCEEeeCCCC-ccCC---ccccC---------------------ccccccccCCCCCcc
Confidence 4467899999999999999999999999999 9884 34431 2333222233333
Q ss_pred -EEeeCCC-CcEeeCCCCCcCCCCCCCcccccCCC
Q psy9427 90 -VCIPEDH-RPVCHCPVGTHPSPSPDVHCARESNL 122 (324)
Q Consensus 90 -~C~~~~~-~~~C~C~~G~~g~~~~~~~C~~~~~~ 122 (324)
+|+++.+ +|.|.|++||++.+.. ..|+++ ++
T Consensus 100 ~~C~~~~g~~y~C~C~~Gy~l~~dG-~~C~~~-~e 132 (142)
T 2c4f_L 100 QYCSDHTGTKRSCRCHEGYSLLADG-VSCTPT-VE 132 (142)
T ss_dssp SEEECCTTSCCEEECCTTEEECTTS-SCEEES-SS
T ss_pred CEeECCCCCCEEEECCCCceECCCC-CCCCCC-Cc
Confidence 8999999 9999999999954433 789887 44
No 40
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=99.00 E-value=1e-10 Score=99.30 Aligned_cols=92 Identities=23% Similarity=0.561 Sum_probs=34.3
Q ss_pred cCCcccccCCCCCCCCCCCEeeeCCCceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCccc-CCCCC--CC
Q psy9427 8 YLTLTCWNSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCI-PACDS--GA 84 (324)
Q Consensus 8 ~~~~~c~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci-~~C~~--~~ 84 (324)
|..-.-+|+|..+||.++|+|++..++|+|.|++| |+|. .|... | ++|.. .+
T Consensus 36 w~~c~dideC~~~pC~ngg~C~n~~g~y~C~C~~G-f~G~---~Ce~~---------------------i~deC~~~~~~ 90 (195)
T 1nfu_B 36 WNKYKDGDQCETSPCQNQGKCKDGLGEYTCTCLEG-FEGK---NCELF---------------------TRKLCSLDNGD 90 (195)
T ss_dssp ----------------------------------------------------------------------CCGGGTGGGG
T ss_pred cccCCCCcccCCCCCCCCCEeECCCCCeeEeCCCC-ceec---ccccc---------------------ccccccCCCCC
Confidence 44444567899999999999999999999999999 8874 34431 3 56654 35
Q ss_pred CCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCC
Q psy9427 85 CGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPT 132 (324)
Q Consensus 85 C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~ 132 (324)
|.. +|+++.++|.|.|++||++.+.. ..|+++ ...||+..
T Consensus 91 C~~--~C~n~~gsy~C~C~~Gy~l~~dG-~~C~~~-----~~~PC~~~ 130 (195)
T 1nfu_B 91 CDQ--FCHEEQNSVVCSCARGYTLADNG-KACIPT-----GPYPCGKQ 130 (195)
T ss_dssp CSS--EEEEETTEEEEECCTTEEECTTS-SCEEES-----SSSCTTCC
T ss_pred CCC--EeECCCCCeEEECCCCceeCCCC-CccccC-----CCCCCCCC
Confidence 654 99999999999999999944332 789876 34567544
No 41
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.99 E-value=1.2e-10 Score=93.28 Aligned_cols=90 Identities=23% Similarity=0.576 Sum_probs=32.6
Q ss_pred cCCcccccCCCCCCCCCCCEeeeCCCceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCccc-CCCCC--CC
Q psy9427 8 YLTLTCWNSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCI-PACDS--GA 84 (324)
Q Consensus 8 ~~~~~c~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci-~~C~~--~~ 84 (324)
|..-.-+|+|..+||.++|+|++..++|+|.|++| |+|. .|... | ++|.. .+
T Consensus 36 ~~~c~d~d~C~~~pC~n~g~C~~~~~~y~C~C~~G-~~G~---~C~~~---------------------i~d~C~~~~~~ 90 (134)
T 2vh0_B 36 WNKYKDGDQCETSPCQNQGKCKDGLGEYTCTCLEG-FEGK---NCELF---------------------TRKLCSLDNGD 90 (134)
T ss_dssp ----------------------------------------------------------------------CCGGGTGGGG
T ss_pred cccCCCcCcCCCCCCCCcCCcccCCCCEEeeCCCC-ccCC---ccccC---------------------CCCccccCCCC
Confidence 33344467899999999999999999999999999 8874 34431 3 55654 34
Q ss_pred CCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCC
Q psy9427 85 CGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCH 130 (324)
Q Consensus 85 C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~ 130 (324)
|.. +|+++.++|.|.|++||++.+.. ..|+++ ...||+
T Consensus 91 C~~--~C~~~~g~y~C~C~~Gy~l~~~g-~~C~~~-----~~~pC~ 128 (134)
T 2vh0_B 91 CDQ--FCHEEQNSVVCSCARGYTLADNG-KACIPT-----GPYPCG 128 (134)
T ss_dssp CSS--EEEEETTEEEEECCTTEEECTTS-SCEEES-----SSSCTT
T ss_pred CCC--EeECCCCCEEEECCCCcEECCCC-CccCcC-----CCcCCC
Confidence 653 99999999999999999954432 788876 334664
No 42
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.96 E-value=9.6e-11 Score=93.94 Aligned_cols=80 Identities=24% Similarity=0.558 Sum_probs=30.4
Q ss_pred cCCCCCCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccC-CCCCCC-CCCCCCCeeecCCCCCCCeeeeCCCCCc
Q psy9427 77 IPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARES-NLCRDS-NPCHPTARCEDTGATNGKVVCSCPELSV 154 (324)
Q Consensus 77 i~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~-~~C~~~-~~C~~~~~C~~~~~~~g~~~C~C~~G~~ 154 (324)
+|+|.++||.++++|+++.++|.|.|++||+| ..|++.+ ++|... .+|.. +|++ +.++|+|.|++||+
T Consensus 42 ~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G-----~~C~~~i~d~C~~~~~~C~~--~C~~---~~g~y~C~C~~Gy~ 111 (134)
T 2vh0_B 42 GDQCETSPCQNQGKCKDGLGEYTCTCLEGFEG-----KNCELFTRKLCSLDNGDCDQ--FCHE---EQNSVVCSCARGYT 111 (134)
T ss_dssp --------------------------------------------CCGGGTGGGGCSS--EEEE---ETTEEEEECCTTEE
T ss_pred cCcCCCCCCCCcCCcccCCCCEEeeCCCCccC-----CccccCCCCccccCCCCCCC--EeEC---CCCCEEEECCCCcE
Confidence 78998899999999999999999999999998 8898754 778332 35753 9999 99999999999999
Q ss_pred cCCCCCCCCCCC
Q psy9427 155 GDPYKTGCVPQG 166 (324)
Q Consensus 155 g~~~~~~C~~~~ 166 (324)
+...+..|.+++
T Consensus 112 l~~~g~~C~~~~ 123 (134)
T 2vh0_B 112 LADNGKACIPTG 123 (134)
T ss_dssp ECTTSSCEEESS
T ss_pred ECCCCCccCcCC
Confidence 665555676553
No 43
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.95 E-value=7.1e-10 Score=101.56 Aligned_cols=82 Identities=26% Similarity=0.533 Sum_probs=71.4
Q ss_pred cCCCCCCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCccc-ccCCCCCC--CCCCCCCCeeecCCCCCCCeeeeCCCCC
Q psy9427 77 IPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCA-RESNLCRD--SNPCHPTARCEDTGATNGKVVCSCPELS 153 (324)
Q Consensus 77 i~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~-~~~~~C~~--~~~C~~~~~C~~~~~~~g~~~C~C~~G~ 153 (324)
+|+|..+||.++++|++..++|.|.|++||+| ..|+ ++ +||.. .++|.+ .|++ +.++|+|.|++||
T Consensus 5 ~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g-----~~C~~~~-~eC~~~~~~~C~~--~C~~---~~g~~~C~C~~g~ 73 (317)
T 3h5c_B 5 GSPCISQPCLHNGSCQDSIWGYTCTCSPGYEG-----SNCELAK-NECHPERTDGCQH--FCLP---GQESYTCSCAQGY 73 (317)
T ss_dssp -CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCS-----SSSCCCS-SSCCTTCTTSCSS--EEEC---CSSSCEEECCTTE
T ss_pred CCcCCCCCCCCCCEeECCCCCeEEECCCCCcC-----CccccCc-ccCCCCCCCCCcC--cccc---CCCeeEEeccccc
Confidence 68898899999999999999999999999998 8998 66 99943 268965 9999 9999999999999
Q ss_pred ccCCCCCCCCCCCCCC
Q psy9427 154 VGDPYKTGCVPQGQCP 169 (324)
Q Consensus 154 ~g~~~~~~C~~~~eC~ 169 (324)
++......|.++++|.
T Consensus 74 ~~~~~~~~C~~~~~c~ 89 (317)
T 3h5c_B 74 RLGEDHKQCVPHDQCA 89 (317)
T ss_dssp ECCTTSSCCEECSSCC
T ss_pred cccccccccccccccc
Confidence 9987667899888773
No 44
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.92 E-value=1.7e-10 Score=98.08 Aligned_cols=79 Identities=23% Similarity=0.537 Sum_probs=29.9
Q ss_pred cCCCCCCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccC-CCCCCC-CCCCCCCeeecCCCCCCCeeeeCCCCCc
Q psy9427 77 IPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARES-NLCRDS-NPCHPTARCEDTGATNGKVVCSCPELSV 154 (324)
Q Consensus 77 i~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~-~~C~~~-~~C~~~~~C~~~~~~~g~~~C~C~~G~~ 154 (324)
+++|..+||.++++|++..++|.|.|++||+| ..|++.+ ++|... .+|.. +|++ +.|+|+|.|++||+
T Consensus 42 ideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G-----~~Ce~~i~deC~~~~~~C~~--~C~n---~~gsy~C~C~~Gy~ 111 (195)
T 1nfu_B 42 GDQCETSPCQNQGKCKDGLGEYTCTCLEGFEG-----KNCELFTRKLCSLDNGDCDQ--FCHE---EQNSVVCSCARGYT 111 (195)
T ss_dssp --------------------------------------------CCGGGTGGGGCSS--EEEE---ETTEEEEECCTTEE
T ss_pred CcccCCCCCCCCCEeECCCCCeeEeCCCCcee-----ccccccccccccCCCCCCCC--EeEC---CCCCeEEECCCCce
Confidence 88999899999999999999999999999998 8898755 789332 36753 9999 99999999999999
Q ss_pred cCCCCCCCCCC
Q psy9427 155 GDPYKTGCVPQ 165 (324)
Q Consensus 155 g~~~~~~C~~~ 165 (324)
+...+..|.++
T Consensus 112 l~~dG~~C~~~ 122 (195)
T 1nfu_B 112 LADNGKACIPT 122 (195)
T ss_dssp ECTTSSCEEES
T ss_pred eCCCCCccccC
Confidence 66544557654
No 45
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=98.87 E-value=5.1e-10 Score=86.08 Aligned_cols=71 Identities=25% Similarity=0.635 Sum_probs=28.0
Q ss_pred ccCCCCC--CCCCCCEeeeCCCceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCCCC-CCCCCCCCE
Q psy9427 14 WNSCDGV--SCGVNAVCVVNNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACD-SGACGTNAV 90 (324)
Q Consensus 14 ~~~C~~~--~C~~~~~C~~~~~~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~-~~~C~~~~~ 90 (324)
+++|... +|. ++|+++.++|+|.|++| |++.+...|++ ||+|. +.+|. ++
T Consensus 29 ~neC~~~~~~C~--~~C~n~~g~y~C~C~~G-y~g~~g~~C~d----------------------ideC~~~~~C~--~~ 81 (107)
T 2w2n_E 29 TNECLDNNGGCS--YVCNDLKIGYECLCPDG-FQLVAQRRCED----------------------IDECQDPDTCS--QL 81 (107)
T ss_dssp CCGGGTGGGGCS--SEEECCSBSCEEECCTT-CEEETTTEEEC-------------------------------------
T ss_pred CccCcCCCCCCC--CEeEeCCCCeEEECCCC-ccccCCCcccc----------------------ccccCCCCCcC--Ce
Confidence 4555532 343 48999999999999999 98865556666 88886 36785 79
Q ss_pred EeeCCCCcEeeCCCCCcCCCC
Q psy9427 91 CIPEDHRPVCHCPVGTHPSPS 111 (324)
Q Consensus 91 C~~~~~~~~C~C~~G~~g~~~ 111 (324)
|+++.++|.|.|++||++++.
T Consensus 82 C~n~~gsy~C~C~~Gy~~~~d 102 (107)
T 2w2n_E 82 CVNLEGGYKCQCEEGFQLDPH 102 (107)
T ss_dssp ---------------------
T ss_pred eecCCCCEEEECCCCceECCC
Confidence 999999999999999998654
No 46
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.83 E-value=4.3e-09 Score=96.32 Aligned_cols=80 Identities=25% Similarity=0.670 Sum_probs=67.8
Q ss_pred ccCCCCCCCCCCCEeeeCCCceeeeeCCCeeecCCCCCCc-ccCCCCCCcCCCCCceeCCCCcccCCCCC---CCCCCCC
Q psy9427 14 WNSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDPNIECR-QVPCVHNHDCSTSHACDLLSHTCIPACDS---GACGTNA 89 (324)
Q Consensus 14 ~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~y~g~~~~~C~-~~~C~~~~~C~~~~~C~c~~~~Ci~~C~~---~~C~~~~ 89 (324)
+|+|..+||.++++|++..++|+|.|++| |+|. .|+ + +++|.. .+|.+
T Consensus 5 ~~~C~~~pC~~~g~C~~~~~~~~C~C~~g-~~g~---~C~~~----------------------~~eC~~~~~~~C~~-- 56 (317)
T 3h5c_B 5 GSPCISQPCLHNGSCQDSIWGYTCTCSPG-YEGS---NCELA----------------------KNECHPERTDGCQH-- 56 (317)
T ss_dssp -CCTTSCCCTTTCCCCCCSSSCCCCCSSS-CCSS---SSCCC----------------------SSSCCTTCTTSCSS--
T ss_pred CCcCCCCCCCCCCEeECCCCCeEEECCCC-CcCC---ccccC----------------------cccCCCCCCCCCcC--
Confidence 67899999999999999999999999999 9874 454 3 788875 68875
Q ss_pred EEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCC
Q psy9427 90 VCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLC 123 (324)
Q Consensus 90 ~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C 123 (324)
.|+++.++|.|.|++||++.... ..|.++ ++|
T Consensus 57 ~C~~~~g~~~C~C~~g~~~~~~~-~~C~~~-~~c 88 (317)
T 3h5c_B 57 FCLPGQESYTCSCAQGYRLGEDH-KQCVPH-DQC 88 (317)
T ss_dssp EEECCSSSCEEECCTTEECCTTS-SCCEEC-SSC
T ss_pred ccccCCCeeEEeccccccccccc-cccccc-ccc
Confidence 99999999999999999986654 788887 766
No 47
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=98.82 E-value=5.2e-09 Score=104.50 Aligned_cols=140 Identities=21% Similarity=0.450 Sum_probs=90.4
Q ss_pred CCCCCCCEeeeCCCceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCCCCC----CCCCCCCEEeeCC
Q psy9427 20 VSCGVNAVCVVNNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACDS----GACGTNAVCIPED 95 (324)
Q Consensus 20 ~~C~~~~~C~~~~~~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~~----~~C~~~~~C~~~~ 95 (324)
.+|..+|+|.. ..|.|++| |+|.... |... ..=... . ...|.. .+|.++++|+.
T Consensus 435 ~~Cs~~G~C~~----g~C~C~~G-y~G~~Ce-c~~~-----~~~~~~-----~----~~~C~~~~~~~~Cs~~G~C~~-- 492 (687)
T 3k6s_B 435 SLCHGKGFLEC----GICRCDTG-YIGKNCE-CQTQ-----GRSSQE-----L----EGSCRKDNNSIICSGLGDCVC-- 492 (687)
T ss_dssp STGGGSEEESS----SSEEECSS-EESTTSC-EESS-----SCCCSG-----G----GSTTSSSTTSCGGGSSEEEET--
T ss_pred CCCCCCCEEeC----CEeEcCCC-CcCCccc-ccCC-----cCCccc-----c----CCCCCCCCCCCcCCCCCEEeC--
Confidence 46877888862 37999999 9996443 1110 000000 0 112332 34888899983
Q ss_pred CCcEeeCC------CCCcCCCCCCCcccccCCCCCC--CCCCCC--CCeeecCCCCCCCeeeeCCCCCccCCCCCCCC-C
Q psy9427 96 HRPVCHCP------VGTHPSPSPDVHCARESNLCRD--SNPCHP--TARCEDTGATNGKVVCSCPELSVGDPYKTGCV-P 164 (324)
Q Consensus 96 ~~~~C~C~------~G~~g~~~~~~~C~~~~~~C~~--~~~C~~--~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~-~ 164 (324)
..|.|+ +||.| ..|+.....|.. ..+|.. +++|.. .+|.|++||+|..+. |. +
T Consensus 493 --G~C~C~~~~~~~~G~~G-----~~Ce~~~~~C~~~~~~~C~~~~~G~C~~-------g~C~C~~G~~G~~Ce--c~~~ 556 (687)
T 3k6s_B 493 --GQCLCHTSDVPGKLIYG-----QYCECDTINCERYNGQVCGGPGRGLCFC-------GKCRCHPGFEGSACQ--CERT 556 (687)
T ss_dssp --TEEEECCCCSTTCCEES-----TTSCEESSCSCEETTEETSHHHHEEEET-------TEEEECTTCCSTTSC--SCCS
T ss_pred --CEEEcCCCCCCCCCccc-----cccccccccccCCCCcCcCCCCCCeEEC-------CEEEcCCCCcCCCCc--cCCC
Confidence 389999 99999 788743377832 236877 889976 289999999998854 32 2
Q ss_pred CCCCCCCCCCCCCCCcccCCcccCCCccCCCCCCeeeeCCCCceeeCCCCCccCC
Q psy9427 165 QGQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCACPDGFSAVG 219 (324)
Q Consensus 165 ~~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~~~~~C~~~~g~y~C~C~~Gy~g~~ 219 (324)
.++|..... .+|.++++|+. ++|.|++||+|..
T Consensus 557 ~~~C~~~~g------------------~~Cs~~G~C~~----g~C~C~~Gy~G~~ 589 (687)
T 3k6s_B 557 TEGCLNPRR------------------VECSGRGRCRC----NVCECHSGYQLPL 589 (687)
T ss_dssp SCTTBCTTC------------------SBTSSSCCBCS----SCBCCSTTCCTTT
T ss_pred CCCCCCCCC------------------CCCCCCCcCCC----CEEECCCCCcCCC
Confidence 344422110 15778888986 4799999999843
No 48
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=98.77 E-value=1.8e-08 Score=95.72 Aligned_cols=102 Identities=26% Similarity=0.611 Sum_probs=70.6
Q ss_pred CCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccC----------CCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCC
Q psy9427 84 ACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARES----------NLCRDSNPCHPTARCEDTGATNGKVVCSCPELS 153 (324)
Q Consensus 84 ~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~----------~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~ 153 (324)
+|.++++|.+ +.+.|.|++||+| ..|+... ++|....+|..++.|.. ++|+|.|++||
T Consensus 204 ~C~~~G~C~~--~~g~C~C~~G~~G-----~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C~~-----~~~~C~C~~G~ 271 (423)
T 2gy5_A 204 ACMNNGVCHE--DTGECICPPGFMG-----RTCEKACELHTFGRTCKERCSGQEGCKSYVFCLP-----DPYGCSCATGW 271 (423)
T ss_dssp CCCTTCEECT--TTCCEECCTTEES-----TTSCEECCTTEESTTSCEECCSTTTTTTCCEEET-----TTTEEECCBTC
T ss_pred CCCCCCEEEC--CCCcEeCCCCccC-----CCcccccCCCCCCCCcCccCCCCCCCCCCCEECC-----CCCeEEeCCCc
Confidence 6888899976 5679999999999 6676421 23422446777788853 68999999999
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCCCCcccCCcccCCCccCCCCCCeeeeCCCCceeeCCCCCcc
Q psy9427 154 VGDPYKTGCVPQGQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCACPDGFSA 217 (324)
Q Consensus 154 ~g~~~~~~C~~~~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~~~~~C~~~~g~y~C~C~~Gy~g 217 (324)
+|..+...|.+.- ....| ..+| +|.++++|.+.. .|.|++||+|
T Consensus 272 ~G~~C~~~C~~G~----~G~~C-----------~~~C--~C~ngg~C~~~~---~C~C~~G~~G 315 (423)
T 2gy5_A 272 KGLQCNEACHPGF----YGPDC-----------KLRC--SCNNGEMCDRFQ---GCLCSPGWQG 315 (423)
T ss_dssp BSGGGCBCCCTTB----CSBTT-----------CCBC--CCTTCCEEETTT---EEECCTTCBS
T ss_pred ccccccCccCCCC----cCCcc-----------cccc--cCCCCCEecCCC---ceECCCCCcC
Confidence 9987644343321 11111 1122 488899998765 3999999998
No 49
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.76 E-value=8.7e-09 Score=97.36 Aligned_cols=81 Identities=26% Similarity=0.539 Sum_probs=66.8
Q ss_pred CCCCCCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccCC
Q psy9427 78 PACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDP 157 (324)
Q Consensus 78 ~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~ 157 (324)
|||...++...+.|+++.++|.|.|++||++.. ...|+++ |||....+|. ..|+| +.|+|+|.|++||.+..
T Consensus 1 ~eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~~~--~~~C~di-deC~~~~~C~--~~C~n---~~g~~~C~C~~g~~~~~ 72 (400)
T 3p5b_L 1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVA--QRRCEDI-DECQDPDTCS--QLCVN---LEGGYKCQCEEGFQLDP 72 (400)
T ss_dssp CCTTTTGGGCSSEEEECSSSEEEECCTTEEECS--SSCEEEC-CCCSTTSSCS--SCCBC---CSSSCBCCCCTTCCCCT
T ss_pred CcccCCCCCCCCEeECCCCCeEEECCCCCCcCC--CCcccCc-hhhhccCCCC--CccCC---Cccceeeeccccccccc
Confidence 467666766678999999999999999999622 1889988 9996566885 49999 99999999999999887
Q ss_pred CCCCCCCCC
Q psy9427 158 YKTGCVPQG 166 (324)
Q Consensus 158 ~~~~C~~~~ 166 (324)
....|..++
T Consensus 73 ~~~~C~~~~ 81 (400)
T 3p5b_L 73 HTKACKAVG 81 (400)
T ss_dssp TTSSCCCST
T ss_pred cccceeecc
Confidence 666777654
No 50
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.62 E-value=1.3e-07 Score=95.61 Aligned_cols=100 Identities=25% Similarity=0.540 Sum_probs=68.7
Q ss_pred CCCCCCEEeeCCC--CcEeeCCCCCcCCCCCCCcccccCCCCCCCC-CCCCCCeeecCCCCCCCeeeeCCCCCccCCCCC
Q psy9427 84 ACGTNAVCIPEDH--RPVCHCPVGTHPSPSPDVHCARESNLCRDSN-PCHPTARCEDTGATNGKVVCSCPELSVGDPYKT 160 (324)
Q Consensus 84 ~C~~~~~C~~~~~--~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~-~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~ 160 (324)
+|.+ +.|+.... .+.+.|+.|+.+.. ..| ++ +||+..+ .| .+.|++ ++++|+|.|++||++. ...
T Consensus 262 ~C~~-g~Ci~~~~~Cd~~~dC~dgsDe~~---~~C-~~-~eC~~~~~~C--~~~C~~---~~~~~~C~C~~G~~~~-~~~ 329 (699)
T 1n7d_A 262 KCHS-GECITLDKVCNMARDCRDWSDEPI---KEC-GT-NECLDNNGGC--SHVCND---LKIGYECLCPDGFQLV-AQR 329 (699)
T ss_dssp CCTT-SCCCCSSCCSCSSCCSSSSCSCCC---SSC-CC-CCTTSSTTTS--CTTCCC---CTTCCCCCCCSSSCCC-SSS
T ss_pred ecCC-CcEeCCcccccccceecCcccccc---ccc-cc-ccccccccCc--CCCccc---CCCCcEEeCCCCeEcC-CCC
Confidence 4543 55654322 24556777665422 344 33 7783322 45 478999 9999999999999983 346
Q ss_pred CCCCCCCCCCCCCCCCCCCcccCCcccCCCccCCCCCCeeeeCCCCceeeCCCCCcc
Q psy9427 161 GCVPQGQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALCRAVGKRPVCACPDGFSA 217 (324)
Q Consensus 161 ~C~~~~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~~~~~C~~~~g~y~C~C~~Gy~g 217 (324)
.|.+++||.. .. +|. ++|+|+.|+|+|.|++||++
T Consensus 330 ~C~dideC~~-~~-------------------~C~--~~C~n~~g~y~C~C~~G~~~ 364 (699)
T 1n7d_A 330 RCEDIDECQD-PD-------------------TCS--QLCVNLEGGYKCQCEEGFQL 364 (699)
T ss_dssp CCCCCCCCSS-SS-------------------SCT--TTCCBCSSCBCCCCCSSCBC
T ss_pred cccCccccCC-CC-------------------ccc--cccccCCCCeeeeeeccccc
Confidence 7999999942 22 353 47999999999999999996
No 51
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.58 E-value=5.6e-08 Score=91.82 Aligned_cols=79 Identities=24% Similarity=0.593 Sum_probs=63.8
Q ss_pred cCCCCCCCCCCCEeeeCCCceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCCCC-CCCCCCCCEEee
Q psy9427 15 NSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACD-SGACGTNAVCIP 93 (324)
Q Consensus 15 ~~C~~~~C~~~~~C~~~~~~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~-~~~C~~~~~C~~ 93 (324)
|+|...++..++.|+++.++|+|.|++| |.+.+...|.+ ||||. +.+|.. .|++
T Consensus 1 ~eC~~~~~~c~~~C~~~~~~y~C~C~~G-~~~~~~~~C~d----------------------ideC~~~~~C~~--~C~n 55 (400)
T 3p5b_L 1 NECLDNNGGCSHVCNDLKIGYECLCPDG-FQLVAQRRCED----------------------IDECQDPDTCSQ--LCVN 55 (400)
T ss_dssp CCTTTTGGGCSSEEEECSSSEEEECCTT-EEECSSSCEEE----------------------CCCCSTTSSCSS--CCBC
T ss_pred CcccCCCCCCCCEeECCCCCeEEECCCC-CCcCCCCcccC----------------------chhhhccCCCCC--ccCC
Confidence 4677777777789999999999999999 88654456776 88886 467864 8999
Q ss_pred CCCCcEeeCCCCCcCCCCCCCccccc
Q psy9427 94 EDHRPVCHCPVGTHPSPSPDVHCARE 119 (324)
Q Consensus 94 ~~~~~~C~C~~G~~g~~~~~~~C~~~ 119 (324)
+.++|.|.|.+||++++.. ..|..+
T Consensus 56 ~~g~~~C~C~~g~~~~~~~-~~C~~~ 80 (400)
T 3p5b_L 56 LEGGYKCQCEEGFQLDPHT-KACKAV 80 (400)
T ss_dssp CSSSCBCCCCTTCCCCTTT-SSCCCS
T ss_pred Cccceeeeccccccccccc-cceeec
Confidence 9999999999999987654 566544
No 52
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=98.56 E-value=1.9e-07 Score=88.73 Aligned_cols=108 Identities=24% Similarity=0.633 Sum_probs=72.0
Q ss_pred CCCCCCEeeeCCCceeeeeCCCeeecCCCCC-CcccCCCCCCcCCCCCceeCCCCcccCCCC-CCCCCCCCEEeeCCCCc
Q psy9427 21 SCGVNAVCVVNNHEARCFCPPGSYVGDPNIE-CRQVPCVHNHDCSTSHACDLLSHTCIPACD-SGACGTNAVCIPEDHRP 98 (324)
Q Consensus 21 ~C~~~~~C~~~~~~~~C~C~~G~y~g~~~~~-C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~-~~~C~~~~~C~~~~~~~ 98 (324)
||.++++|.+ +.+.|.|++| |+|..... |... .. ...|.++|. .++|.+++.|. .+.|
T Consensus 204 ~C~~~G~C~~--~~g~C~C~~G-~~G~~Ce~~C~~g--~~-------------g~~C~~~C~~~~~C~~~g~C~--~~~~ 263 (423)
T 2gy5_A 204 ACMNNGVCHE--DTGECICPPG-FMGRTCEKACELH--TF-------------GRTCKERCSGQEGCKSYVFCL--PDPY 263 (423)
T ss_dssp CCCTTCEECT--TTCCEECCTT-EESTTSCEECCTT--EE-------------STTSCEECCSTTTTTTCCEEE--TTTT
T ss_pred CCCCCCEEEC--CCCcEeCCCC-ccCCCcccccCCC--CC-------------CCCcCccCCCCCCCCCCCEEC--CCCC
Confidence 7888888876 4568999999 88864431 2210 00 012234454 35688888885 5789
Q ss_pred EeeCCCCCcCCCCCCCccccc------CCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccCCCC
Q psy9427 99 VCHCPVGTHPSPSPDVHCARE------SNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDPYK 159 (324)
Q Consensus 99 ~C~C~~G~~g~~~~~~~C~~~------~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~ 159 (324)
.|.|++||+| ..|+.. -+.|...-+|.++++|.+ .. .|.|++||+|..++
T Consensus 264 ~C~C~~G~~G-----~~C~~~C~~G~~G~~C~~~C~C~ngg~C~~---~~---~C~C~~G~~G~~Ce 319 (423)
T 2gy5_A 264 GCSCATGWKG-----LQCNEACHPGFYGPDCKLRCSCNNGEMCDR---FQ---GCLCSPGWQGLQCE 319 (423)
T ss_dssp EEECCBTCBS-----GGGCBCCCTTBCSBTTCCBCCCTTCCEEET---TT---EEECCTTCBSTTSC
T ss_pred eEEeCCCccc-----ccccCccCCCCcCCcccccccCCCCCEecC---CC---ceECCCCCcCCCCc
Confidence 9999999999 677541 023422226888999988 43 39999999998753
No 53
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.55 E-value=1.2e-08 Score=95.82 Aligned_cols=82 Identities=20% Similarity=0.436 Sum_probs=21.6
Q ss_pred cCCCCCCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccC
Q psy9427 77 IPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGD 156 (324)
Q Consensus 77 i~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~ 156 (324)
+|+|..+++...+.|.+..++|.|.|++||++.+.. ..|+++ +||....+|. ..|++ +.|+|+|.|++||.+.
T Consensus 3 ~~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~~~-~~C~d~-~eC~~~~~C~--~~C~~---~~g~~~C~C~~g~~l~ 75 (386)
T 3v65_B 3 EENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDG-RTCQDV-NECAEEGYCS--QGCTN---SEGAFQCWCEAGYELR 75 (386)
T ss_dssp ---------------------------------------------------CCT--TEEC--------CCEECCTTEEEC
T ss_pred cCcccCCCCCCCCCCcCCCCCcEeECCCCceECCCC-CccCcc-ceeCCcCccc--CcCCC---CCCCCeEEECCCceEc
Confidence 678876665555689999999999999999965433 899888 9995456895 45999 9999999999999976
Q ss_pred CCCCCCCCC
Q psy9427 157 PYKTGCVPQ 165 (324)
Q Consensus 157 ~~~~~C~~~ 165 (324)
.....|...
T Consensus 76 ~d~~~C~~~ 84 (386)
T 3v65_B 76 PDRRSCKAL 84 (386)
T ss_dssp TTSSCEEEC
T ss_pred CCCCeECCc
Confidence 655566544
No 54
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.51 E-value=2.2e-07 Score=93.97 Aligned_cols=82 Identities=26% Similarity=0.530 Sum_probs=63.2
Q ss_pred cCCCCCCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccC
Q psy9427 77 IPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGD 156 (324)
Q Consensus 77 i~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~ 156 (324)
+++|........+.|+++.++|.|.|++||++.. ...|+++ +||+...+|. ++|+| +.|+|+|.|++||++.
T Consensus 294 ~~eC~~~~~~C~~~C~~~~~~~~C~C~~G~~~~~--~~~C~di-deC~~~~~C~--~~C~n---~~g~y~C~C~~G~~~~ 365 (699)
T 1n7d_A 294 TNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVA--QRRCEDI-DECQDPDTCS--QLCVN---LEGGYKCQCEEGFQLD 365 (699)
T ss_dssp CCCTTSSTTTSCTTCCCCTTCCCCCCCSSSCCCS--SSCCCCC-CCCSSSSSCT--TTCCB---CSSCBCCCCCSSCBCC
T ss_pred cccccccccCcCCCcccCCCCcEEeCCCCeEcCC--CCcccCc-cccCCCCccc--ccccc---CCCCeeeeeecccccC
Confidence 5566533211235899999999999999999722 1789988 9995566884 69999 9999999999999987
Q ss_pred CCCCCCCCCC
Q psy9427 157 PYKTGCVPQG 166 (324)
Q Consensus 157 ~~~~~C~~~~ 166 (324)
.....|..++
T Consensus 366 ~~~~~C~~~~ 375 (699)
T 1n7d_A 366 PHTKACKAVG 375 (699)
T ss_dssp SSCCCCBCCS
T ss_pred CCCCcccccc
Confidence 7666676553
No 55
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=98.44 E-value=2e-07 Score=93.17 Aligned_cols=152 Identities=28% Similarity=0.642 Sum_probs=92.5
Q ss_pred CCCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCC---------CCCCC---CCCCCCCeeecCCCCCCCeeee
Q psy9427 81 DSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESN---------LCRDS---NPCHPTARCEDTGATNGKVVCS 148 (324)
Q Consensus 81 ~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~---------~C~~~---~~C~~~~~C~~~~~~~g~~~C~ 148 (324)
.+.+|..+++|. ...|.|++||+| ..|+-..+ .|... .+|..++.|+. | +|.
T Consensus 433 ~s~~Cs~~G~C~----~g~C~C~~Gy~G-----~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~-----G--~C~ 496 (687)
T 3k6s_B 433 DRSLCHGKGFLE----CGICRCDTGYIG-----KNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC-----G--QCL 496 (687)
T ss_dssp CSSTGGGSEEES----SSSEEECSSEES-----TTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEET-----T--EEE
T ss_pred CCCCCCCCCEEe----CCEeEcCCCCcC-----CcccccCCcCCccccCCCCCCCCCCCcCCCCCEEeC-----C--EEE
Confidence 346787778887 357999999999 67762212 47321 24888899976 2 899
Q ss_pred CC------CCCccCCCCCCCCCCCCCCCCCCCCCCCCcccCCcccCCCccCCCC--CCeeeeCCCCceeeCCCCCccCCC
Q psy9427 149 CP------ELSVGDPYKTGCVPQGQCPRGDADCPPSSRCSGGQCVSVCQGACGP--NALCRAVGKRPVCACPDGFSAVGG 220 (324)
Q Consensus 149 C~------~G~~g~~~~~~C~~~~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~~--~~~C~~~~g~y~C~C~~Gy~g~~~ 220 (324)
|+ +||.|..+. + +...|..... .+|.+ +++|.. .+|.|++||+|...
T Consensus 497 C~~~~~~~~G~~G~~Ce--~-~~~~C~~~~~------------------~~C~~~~~G~C~~----g~C~C~~G~~G~~C 551 (687)
T 3k6s_B 497 CHTSDVPGKLIYGQYCE--C-DTINCERYNG------------------QVCGGPGRGLCFC----GKCRCHPGFEGSAC 551 (687)
T ss_dssp ECCCCSTTCCEESTTSC--E-ESSCSCEETT------------------EETSHHHHEEEET----TEEEECTTCCSTTS
T ss_pred cCCCCCCCCCccccccc--c-ccccccCCCC------------------cCcCCCCCCeEEC----CEEEcCCCCcCCCC
Confidence 99 999998843 1 3334421100 14777 788985 27999999998443
Q ss_pred CCCCCccccCCCCCCC--CccCCCCCcCCCCcccCCCCCCCCCCCCCcccC-CcccCCCCCCCCCC
Q psy9427 221 EARVGCFREMSACAGD--QECLAGEEKCIGGRCRVACLSHSDCSEGERCIS-SLCQSPCTSHSQCP 283 (324)
Q Consensus 221 ~~~~~C~~~~~~C~~~--~~C~~~~~~C~~~~C~~~C~~~~~C~~~~~C~~-~~C~~~C~~~~~C~ 283 (324)
. |......|... ..|. .+..|+.++|. |..+ +.|..|.. ..|.++|.+++.|.
T Consensus 552 e----c~~~~~~C~~~~g~~Cs-~~G~C~~g~C~--C~~G---y~G~~Ce~c~~C~~~C~~~g~Cv 607 (687)
T 3k6s_B 552 Q----CERTTEGCLNPRRVECS-GRGRCRCNVCE--CHSG---YQLPLCQECPGCPSPCGKYISCA 607 (687)
T ss_dssp C----SCCSSCTTBCTTCSBTS-SSCCBCSSCBC--CSTT---CCTTTTCCCTTSCCCCTTTHHHH
T ss_pred c----cCCCCCCCCCCCCCCCC-CCCcCCCCEEE--CCCC---CcCCCCCCCCCCCcccCCCCCCC
Confidence 3 11112344332 3454 23345555442 3222 55667765 46777787777664
No 56
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.44 E-value=3.3e-07 Score=93.67 Aligned_cols=72 Identities=26% Similarity=0.553 Sum_probs=60.2
Q ss_pred CEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCCCCCCCCC
Q psy9427 89 AVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQC 168 (324)
Q Consensus 89 ~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~~~~eC 168 (324)
+.|+++.++|.|.|++||++.. ...|+++ +||....+| .++|+| +.|+|+|.|++||.+......|..++++
T Consensus 324 ~~C~~~~~~y~C~C~~Gy~l~~--g~~C~di-deC~~~~~C--~~~C~n---~~gsy~C~C~~Gy~l~~~~~~C~~~~~~ 395 (791)
T 3m0c_C 324 HVCNDLKIGYECLCPDGFQLVA--QRRCEDI-DECQDPDTC--SQLCVN---LEGGYKCQCEEGFQLDPHTKACKAVGSI 395 (791)
T ss_dssp SEEEECSBSEEEECCTTCEEET--TTEEECC-CCCSSSSSC--TTTCCB---CSSCBCCCCCSSEECCSSCCCCEETTSC
T ss_pred ccccCCCCCcccCCCCCCccCC--CCccccC-cccCCCCCC--CCeeec---CCCCceeecCCCCEeCCCCceeeecccc
Confidence 5999999999999999998621 1889998 999545567 469999 9999999999999987766778877655
No 57
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.30 E-value=2e-07 Score=87.50 Aligned_cols=71 Identities=20% Similarity=0.441 Sum_probs=14.5
Q ss_pred CCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCcccCCcccCCCccCCCCCCee
Q psy9427 121 NLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQCPRGDADCPPSSRCSGGQCVSVCQGACGPNALC 200 (324)
Q Consensus 121 ~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~~~~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~~~~~C 200 (324)
||| ..+++...+.|.+ ..|+|+|.|++||++......|.+++||. ... +|.+ .|
T Consensus 4 ~~C-~~~~~~c~~~C~~---~~g~~~C~C~~G~~l~~~~~~C~d~~eC~-~~~-------------------~C~~--~C 57 (386)
T 3v65_B 4 ENC-NVNNGGCAQKCQM---IRGAVQCTCHTGYRLTEDGRTCQDVNECA-EEG-------------------YCSQ--GC 57 (386)
T ss_dssp ------------------------------------------------------------------------CCTT--EE
T ss_pred Ccc-cCCCCCCCCCCcC---CCCCcEeECCCCceECCCCCccCccceeC-CcC-------------------cccC--cC
Confidence 888 5555444569998 89999999999999766556799999994 222 3544 49
Q ss_pred eeCCCCceeeCCCCCcc
Q psy9427 201 RAVGKRPVCACPDGFSA 217 (324)
Q Consensus 201 ~~~~g~y~C~C~~Gy~g 217 (324)
+++.|+|+|.|++||..
T Consensus 58 ~~~~g~~~C~C~~g~~l 74 (386)
T 3v65_B 58 TNSEGAFQCWCEAGYEL 74 (386)
T ss_dssp C-----CCEECCTTEEE
T ss_pred CCCCCCCeEEECCCceE
Confidence 99999999999999985
No 58
>1oig_A Dumpy, CG33196-PB; structural protein; NMR {Drosophila melanogaster} SCOP: g.3.18.1
Probab=98.26 E-value=3e-07 Score=50.34 Aligned_cols=26 Identities=23% Similarity=0.585 Sum_probs=22.7
Q ss_pred ccccccCCCCCCCCcccCCcccccch
Q psy9427 294 ELGCRQNEECSGQMICAGSKCTGWVE 319 (324)
Q Consensus 294 ~~~C~~~~~C~~~~~C~~~~C~np~~ 319 (324)
+++|..++||++.++|+|++|+|||.
T Consensus 1 RpEC~~~sdCp~~~aC~n~kC~dPC~ 26 (26)
T 1oig_A 1 RPECVLNSDCPSNQACVNQKCRDPXX 26 (26)
T ss_dssp CCSCCSSTTSSTTCEECSSSEECC--
T ss_pred CCcccccCcCCcCHhhhcCcccCCCC
Confidence 36899999999999999999999993
No 59
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.11 E-value=2.6e-06 Score=52.56 Aligned_cols=32 Identities=25% Similarity=0.583 Sum_probs=30.3
Q ss_pred cCCCCCCCCCCCCEEeeCCCCcEeeCCCCCcC
Q psy9427 77 IPACDSGACGTNAVCIPEDHRPVCHCPVGTHP 108 (324)
Q Consensus 77 i~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g 108 (324)
+++|...||.++++|++..++|.|.|++||+|
T Consensus 3 ~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G 34 (39)
T 1edm_B 3 GDQCESNPCLNGGSCKDDINSYECWCPFGFEG 34 (39)
T ss_dssp CCTTTTCCCCTTCEEEEETTEEEEECCTTCCS
T ss_pred cccCCCCCCCCCCEeEcCCCceEeECCCCCcC
Confidence 68898899999999999999999999999998
No 60
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.10 E-value=3.1e-06 Score=52.19 Aligned_cols=33 Identities=24% Similarity=0.699 Sum_probs=30.6
Q ss_pred ccCCCCCCCCCCCEeeeCCCceeeeeCCCeeecC
Q psy9427 14 WNSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGD 47 (324)
Q Consensus 14 ~~~C~~~~C~~~~~C~~~~~~~~C~C~~G~y~g~ 47 (324)
+|+|..+||.++++|++..++|+|.|++| |+|.
T Consensus 3 ~d~C~~~pC~ngg~C~~~~~~~~C~C~~G-~~G~ 35 (39)
T 1edm_B 3 GDQCESNPCLNGGSCKDDINSYECWCPFG-FEGK 35 (39)
T ss_dssp CCTTTTCCCCTTCEEEEETTEEEEECCTT-CCST
T ss_pred cccCCCCCCCCCCEeEcCCCceEeECCCC-CcCC
Confidence 57899999999999999999999999999 9885
No 61
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.03 E-value=3.7e-06 Score=85.95 Aligned_cols=80 Identities=24% Similarity=0.578 Sum_probs=59.9
Q ss_pred CCCCCCCCCC-----EeeeCCCceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCCCC-CCCCCCCCE
Q psy9427 17 CDGVSCGVNA-----VCVVNNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACD-SGACGTNAV 90 (324)
Q Consensus 17 C~~~~C~~~~-----~C~~~~~~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~-~~~C~~~~~ 90 (324)
|..++|..+. .|+++.++|+|.|++| |.+.+...|.+ |+||. +.+|. +.
T Consensus 310 C~~~~C~~~~~~C~~~C~~~~~~y~C~C~~G-y~l~~g~~C~d----------------------ideC~~~~~C~--~~ 364 (791)
T 3m0c_C 310 CGTNECLDNNGGCSHVCNDLKIGYECLCPDG-FQLVAQRRCED----------------------IDECQDPDTCS--QL 364 (791)
T ss_dssp BSCCSTTTGGGGCSSEEEECSBSEEEECCTT-CEEETTTEEEC----------------------CCCCSSSSSCT--TT
T ss_pred cccccccccccCccccccCCCCCcccCCCCC-CccCCCCcccc----------------------CcccCCCCCCC--Ce
Confidence 4445555433 8999999999999999 87644456666 88886 34564 58
Q ss_pred EeeCCCCcEeeCCCCCcCCCCCCCcccccCCCC
Q psy9427 91 CIPEDHRPVCHCPVGTHPSPSPDVHCARESNLC 123 (324)
Q Consensus 91 C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C 123 (324)
|+++.++|.|.|++||++.+.. ..|..+ ++.
T Consensus 365 C~n~~gsy~C~C~~Gy~l~~~~-~~C~~~-~~~ 395 (791)
T 3m0c_C 365 CVNLEGGYKCQCEEGFQLDPHT-KACKAV-GSI 395 (791)
T ss_dssp CCBCSSCBCCCCCSSEECCSSC-CCCEET-TSC
T ss_pred eecCCCCceeecCCCCEeCCCC-ceeeec-ccc
Confidence 9999999999999999986654 678766 544
No 62
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=97.91 E-value=8.1e-06 Score=70.31 Aligned_cols=106 Identities=20% Similarity=0.386 Sum_probs=70.3
Q ss_pred CCCCCCCEeeeCCCceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCCCCCCCCCCCCEEeeCCCCcE
Q psy9427 20 VSCGVNAVCVVNNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACDSGACGTNAVCIPEDHRPV 99 (324)
Q Consensus 20 ~~C~~~~~C~~~~~~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~~~~C~~~~~C~~~~~~~~ 99 (324)
..|..+++|+. ..|.|++| |+|.... |...... ..+ ....|.......+|..+++|+. ..
T Consensus 96 ~~Csg~G~C~~----g~C~C~~G-~~G~~Ce-c~~~~~~--~~~--------~~~~C~~~~~~~~Csg~G~C~~----g~ 155 (217)
T 2p28_B 96 SLCHGKGFLEC----GICRCDTG-YIGKNCE-CQTQGRS--SQE--------LEGSCRKDNNSIICSGLGDCVC----GQ 155 (217)
T ss_dssp CTTTTSEEEET----TEEEECTT-EESTTSC-EECCCCC---GG--------GGGGGBSSTTSCBGGGTEEEET----TE
T ss_pred CccCCCceEEC----CEEECCCC-ccCCccc-ccCcccc--ccc--------CCCcCCCCCCCCCCCCCCEEeC----Cc
Confidence 46888899974 38999999 9996543 2211000 000 0122333333467888899983 47
Q ss_pred eeCCCC------CcCCCCCCCcccccCCCCCCCC---CCCCC--CeeecCCCCCCCeeeeCCCCCccCCC
Q psy9427 100 CHCPVG------THPSPSPDVHCARESNLCRDSN---PCHPT--ARCEDTGATNGKVVCSCPELSVGDPY 158 (324)
Q Consensus 100 C~C~~G------~~g~~~~~~~C~~~~~~C~~~~---~C~~~--~~C~~~~~~~g~~~C~C~~G~~g~~~ 158 (324)
|.|.+| |+| ..|+...+.| ..+ +|..+ ++|.. .+|.|.+||+|..+
T Consensus 156 C~C~~gw~~~~~~~G-----~~Ce~~~~~C-~~~~g~~C~~~~~G~C~~-------g~C~C~~G~~G~~C 212 (217)
T 2p28_B 156 CLCHTSDVPGKLIYG-----QYCECDTINC-ERYNGQVCGGPGRGLCFC-------GKCRCHPGFEGSAC 212 (217)
T ss_dssp EEECCCCSTTCCEES-----TTSCEESSCS-CEETTEETTCTTTEEEET-------TEEEECTTEESTTS
T ss_pred eECCCCCCCcccEEC-----CCcccCCccC-CCCCCCCCCCCCCcEEeC-------CeeECCCCCccCCc
Confidence 999999 567 7887433678 433 68777 89976 28999999999874
No 63
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=97.90 E-value=7.1e-06 Score=54.60 Aligned_cols=38 Identities=18% Similarity=0.444 Sum_probs=32.4
Q ss_pred cCCCCCCCCCCCCEEe-----eCCCCcEeeCCCCCcCCCCCCCccccc
Q psy9427 77 IPACDSGACGTNAVCI-----PEDHRPVCHCPVGTHPSPSPDVHCARE 119 (324)
Q Consensus 77 i~~C~~~~C~~~~~C~-----~~~~~~~C~C~~G~~g~~~~~~~C~~~ 119 (324)
+|+|.++||.++++|+ +..++|.|.|++||+| ..|+..
T Consensus 8 ~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G-----~~CE~~ 50 (55)
T 3u7u_G 8 CAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTG-----DRCQNY 50 (55)
T ss_dssp CCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEES-----TTSCEE
T ss_pred CCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcC-----CCcCcc
Confidence 8999999999999995 5567999999999999 788754
No 64
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=97.89 E-value=1.4e-05 Score=53.12 Aligned_cols=35 Identities=23% Similarity=0.462 Sum_probs=29.2
Q ss_pred ccccCCCCCCCCCCCEee-----eCCCceeeeeCCCeeecC
Q psy9427 12 TCWNSCDGVSCGVNAVCV-----VNNHEARCFCPPGSYVGD 47 (324)
Q Consensus 12 ~c~~~C~~~~C~~~~~C~-----~~~~~~~C~C~~G~y~g~ 47 (324)
.-+|+|+++||.++|+|. +..++|+|.|++| |+|.
T Consensus 6 ~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g-~~G~ 45 (55)
T 3u7u_G 6 VKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNE-FTGD 45 (55)
T ss_dssp EECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTT-EEST
T ss_pred ccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCC-CcCC
Confidence 346889999999999994 5678999999999 9995
No 65
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.82 E-value=3.1e-05 Score=51.11 Aligned_cols=38 Identities=26% Similarity=0.657 Sum_probs=33.2
Q ss_pred cCCCCCC---CCCCCCEEe--eCCCCcEeeCCCCCcCCCCCCCccccc
Q psy9427 77 IPACDSG---ACGTNAVCI--PEDHRPVCHCPVGTHPSPSPDVHCARE 119 (324)
Q Consensus 77 i~~C~~~---~C~~~~~C~--~~~~~~~C~C~~G~~g~~~~~~~C~~~ 119 (324)
|++|.+. ||.++++|+ +..++|.|.|++||+| ..|+..
T Consensus 3 i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G-----~~Ce~~ 45 (53)
T 1egf_A 3 YPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSG-----DRCQTR 45 (53)
T ss_dssp ECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCS-----SSSCCC
T ss_pred cccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcC-----CcCCcc
Confidence 7888876 999999999 7889999999999999 778653
No 66
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=97.80 E-value=2.7e-06 Score=57.90 Aligned_cols=41 Identities=24% Similarity=0.651 Sum_probs=34.8
Q ss_pred cCCCCCCCCCCC--CEEeeCCCCcEeeCCCCCc-CCCCCCCcccccCCCC
Q psy9427 77 IPACDSGACGTN--AVCIPEDHRPVCHCPVGTH-PSPSPDVHCARESNLC 123 (324)
Q Consensus 77 i~~C~~~~C~~~--~~C~~~~~~~~C~C~~G~~-g~~~~~~~C~~~~~~C 123 (324)
+|+|.++||.++ ++|++..++|.|.|++||+ | ..|++. ++|
T Consensus 11 ~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G-----~~C~~~-~~C 54 (61)
T 2k2s_B 11 PAACSSNPCGPEAAGTCKETNSGYICRCNQGYRIS-----LDGTGN-VTC 54 (61)
T ss_dssp CCHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEE-----ECSSSC-EEE
T ss_pred CCcCcCCCCcCCCccccccCCCceEeECCCCCccC-----CCCCCC-CEe
Confidence 688888999988 7999999999999999999 8 667654 444
No 67
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=97.74 E-value=2.7e-05 Score=49.55 Aligned_cols=36 Identities=19% Similarity=0.414 Sum_probs=30.0
Q ss_pred CCCCC---CCCCCCEEe--eCCCCcEeeCCCCCcCCCCCCCccccc
Q psy9427 79 ACDSG---ACGTNAVCI--PEDHRPVCHCPVGTHPSPSPDVHCARE 119 (324)
Q Consensus 79 ~C~~~---~C~~~~~C~--~~~~~~~C~C~~G~~g~~~~~~~C~~~ 119 (324)
+|.+. ||.++++|+ +..++|+|.|++||+| ..|+..
T Consensus 2 ~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G-----~~Ce~~ 42 (45)
T 1a3p_A 2 GXPSSYDGYCLNGGVXMHIESLDSYTCNCVIGYSG-----DRCQTR 42 (45)
T ss_dssp CCTTCCSSCCSSSCEEEECTTTSSEEEECCTTEET-----TTTCEE
T ss_pred CcccCCCCCCCCCCEEEeecCCCCEEEEcCCCCcC-----CcCCcc
Confidence 45555 899999998 6778999999999999 778653
No 68
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=97.73 E-value=8.3e-06 Score=55.48 Aligned_cols=37 Identities=24% Similarity=0.489 Sum_probs=32.2
Q ss_pred CcccccCCCCCCCCCC--CEeeeCCCceeeeeCCCeee-cC
Q psy9427 10 TLTCWNSCDGVSCGVN--AVCVVNNHEARCFCPPGSYV-GD 47 (324)
Q Consensus 10 ~~~c~~~C~~~~C~~~--~~C~~~~~~~~C~C~~G~y~-g~ 47 (324)
+.+-+|+|..+||.++ ++|++..++|+|.|++| |+ |.
T Consensus 7 ~~~~~d~C~snPC~nga~gtC~~~~g~y~C~C~~G-y~~G~ 46 (61)
T 2k2s_B 7 LSETPAACSSNPCGPEAAGTCKETNSGYICRCNQG-YRISL 46 (61)
T ss_dssp CTTSCCHHHHCSSCSSSCCEEEECSSEEEEECCTT-EEEEE
T ss_pred hcCCCCcCcCCCCcCCCccccccCCCceEeECCCC-CccCC
Confidence 3455688989999998 79999999999999999 98 84
No 69
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.60 E-value=5e-05 Score=50.07 Aligned_cols=34 Identities=29% Similarity=0.674 Sum_probs=30.0
Q ss_pred cccCCCCC---CCCCCCEee--eCCCceeeeeCCCeeecC
Q psy9427 13 CWNSCDGV---SCGVNAVCV--VNNHEARCFCPPGSYVGD 47 (324)
Q Consensus 13 c~~~C~~~---~C~~~~~C~--~~~~~~~C~C~~G~y~g~ 47 (324)
.+++|..+ ||.++|+|+ +..++|+|.|++| |+|.
T Consensus 2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G-~~G~ 40 (53)
T 1egf_A 2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIG-YSGD 40 (53)
T ss_dssp EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTT-CCSS
T ss_pred CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCC-CcCC
Confidence 46788876 999999999 7889999999999 9885
No 70
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=97.57 E-value=2.7e-05 Score=53.34 Aligned_cols=41 Identities=17% Similarity=0.443 Sum_probs=33.9
Q ss_pred CCCCCCCCCCCCEEee-----CCCCcEeeCCCCCcCCCCCCCcccccCCCC
Q psy9427 78 PACDSGACGTNAVCIP-----EDHRPVCHCPVGTHPSPSPDVHCARESNLC 123 (324)
Q Consensus 78 ~~C~~~~C~~~~~C~~-----~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C 123 (324)
++|..+||.++++|++ ..++|.|.|++||+| ..|+..++++
T Consensus 7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G-----~~Ce~~i~~~ 52 (63)
T 1hae_A 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTG-----ARCTENVPMK 52 (63)
T ss_dssp CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEES-----TTSCEECCSS
T ss_pred CCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcC-----CccCcCcCcc
Confidence 5666789999999996 668999999999999 8897544776
No 71
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=97.54 E-value=0.0001 Score=46.76 Aligned_cols=31 Identities=26% Similarity=0.453 Sum_probs=27.0
Q ss_pred CCCCC---CCCCCCEee--eCCCceeeeeCCCeeecC
Q psy9427 16 SCDGV---SCGVNAVCV--VNNHEARCFCPPGSYVGD 47 (324)
Q Consensus 16 ~C~~~---~C~~~~~C~--~~~~~~~C~C~~G~y~g~ 47 (324)
+|..+ ||.++|+|+ +..++|+|.|++| |+|.
T Consensus 2 ~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G-~~G~ 37 (45)
T 1a3p_A 2 GXPSSYDGYCLNGGVXMHIESLDSYTCNCVIG-YSGD 37 (45)
T ss_dssp CCTTCCSSCCSSSCEEEECTTTSSEEEECCTT-EETT
T ss_pred CcccCCCCCCCCCCEEEeecCCCCEEEEcCCC-CcCC
Confidence 56666 999999998 6778999999999 9985
No 72
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=97.48 E-value=5.2e-05 Score=65.25 Aligned_cols=93 Identities=26% Similarity=0.583 Sum_probs=62.8
Q ss_pred CCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCC---------CCCC---CCCCCCCCeeecCCCCCCCeeeeCC
Q psy9427 83 GACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESN---------LCRD---SNPCHPTARCEDTGATNGKVVCSCP 150 (324)
Q Consensus 83 ~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~---------~C~~---~~~C~~~~~C~~~~~~~g~~~C~C~ 150 (324)
..|..+++|+. ..|.|.+||+| ..|+-..+ .|.. ..+|..+++|+. .+|+|.
T Consensus 96 ~~Csg~G~C~~----g~C~C~~G~~G-----~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~-------g~C~C~ 159 (217)
T 2p28_B 96 SLCHGKGFLEC----GICRCDTGYIG-----KNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC-------GQCLCH 159 (217)
T ss_dssp CTTTTSEEEET----TEEEECTTEES-----TTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEET-------TEEEEC
T ss_pred CccCCCceEEC----CEEECCCCccC-----CcccccCcccccccCCCcCCCCCCCCCCCCCCEEeC-------CceECC
Confidence 45878889974 58999999999 66652212 3532 346888889976 379999
Q ss_pred CCC------ccCCCCCCCC-CCCCCCCCCCCCCCCCcccCCcccCCCccCCCCC--CeeeeCCCCceeeCCCCCcc
Q psy9427 151 ELS------VGDPYKTGCV-PQGQCPRGDADCPPSSRCSGGQCVSVCQGACGPN--ALCRAVGKRPVCACPDGFSA 217 (324)
Q Consensus 151 ~G~------~g~~~~~~C~-~~~eC~~~~~~C~~~~~C~~~~C~d~C~~~C~~~--~~C~~~~g~y~C~C~~Gy~g 217 (324)
+|| +|.. |. +..+|..... .+|..+ ++|.. .+|.|.+||+|
T Consensus 160 ~gw~~~~~~~G~~----Ce~~~~~C~~~~g------------------~~C~~~~~G~C~~----g~C~C~~G~~G 209 (217)
T 2p28_B 160 TSDVPGKLIYGQY----CECDTINCERYNG------------------QVCGGPGRGLCFC----GKCRCHPGFEG 209 (217)
T ss_dssp CCCSTTCCEESTT----SCEESSCSCEETT------------------EETTCTTTEEEET----TEEEECTTEES
T ss_pred CCCCCcccEECCC----cccCCccCCCCCC------------------CCCCCCCCcEEeC----CeeECCCCCcc
Confidence 994 6665 43 2334421100 147666 89985 28999999998
No 73
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=97.45 E-value=7.5e-05 Score=49.63 Aligned_cols=42 Identities=24% Similarity=0.552 Sum_probs=33.3
Q ss_pred CCCCC--CCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCC
Q psy9427 78 PACDS--GACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLC 123 (324)
Q Consensus 78 ~~C~~--~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C 123 (324)
|||.. ..|. +.|+|+.++|.|.|++||++.+.. ..|+++ ++|
T Consensus 2 dEC~~~~~~C~--~~C~nt~Gsy~C~C~~Gy~L~~d~-~~C~di-dec 45 (55)
T 2jkh_L 2 KLCSLDNGDCD--QFCHEEQNSVVCSCARGYTLADNG-KACIPT-GPY 45 (55)
T ss_dssp CCTTTGGGGCS--SEEEEETTEEEEECCTTEEECTTS-SCEEES-SSS
T ss_pred ccccCCCCCcC--cEeEcCCCCeEEeCCCCCEECCCC-CeeccC-ccc
Confidence 45643 3464 589999999999999999975554 789998 888
No 74
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=97.42 E-value=0.00011 Score=71.76 Aligned_cols=99 Identities=18% Similarity=0.389 Sum_probs=34.3
Q ss_pred CcEe-eCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeecCC-CCCCCeeeeCCCCCccCCCCCCCCCCCCCCCCCCC
Q psy9427 97 RPVC-HCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTG-ATNGKVVCSCPELSVGDPYKTGCVPQGQCPRGDAD 174 (324)
Q Consensus 97 ~~~C-~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~~~-~~~g~~~C~C~~G~~g~~~~~~C~~~~eC~~~~~~ 174 (324)
++.| .|++||.| ..+... +.| ...+|...+.|.+.. .....+.|.|++||+|..+. .|.+.-.- ...
T Consensus 417 G~~C~~C~~Gy~G-----~~c~~~-~~C-~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce-~C~~G~~g-~~~-- 485 (525)
T 4aqs_A 417 GERCDVCKEGFYD-----LSAEDP-YGC-KSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCD-QCLPQHWG-LSN-- 485 (525)
T ss_dssp TTTTCEECTTEEC-----CCTTST-TSS-EECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTC-C-------------
T ss_pred CCcccCCCCCCcC-----CCCCCC-CCC-ccCCCCCCceecCCCcccCCCCEEECCCCCcCCCcc-cCCCCccC-CCC--
Confidence 4455 68888887 444444 455 444565555554310 01245689999999998853 23321100 000
Q ss_pred CCCCCcccCCcccCCCcc-CCCCCCeeeeC--CCCceeeCCCCCcc
Q psy9427 175 CPPSSRCSGGQCVSVCQG-ACGPNALCRAV--GKRPVCACPDGFSA 217 (324)
Q Consensus 175 C~~~~~C~~~~C~d~C~~-~C~~~~~C~~~--~g~y~C~C~~Gy~g 217 (324)
-++.|.. +|.+++.+... ...++|.|++||+|
T Consensus 486 -----------~~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~G~~G 520 (525)
T 4aqs_A 486 -----------DLDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIG 520 (525)
T ss_dssp ----------------------------------------------
T ss_pred -----------CCCCCcCCCCCCCCccCCccCCCCCeeECCCCCcC
Confidence 0222333 46666555433 23458999999998
No 75
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=97.32 E-value=7.1e-05 Score=49.76 Aligned_cols=44 Identities=30% Similarity=0.692 Sum_probs=34.9
Q ss_pred CCCCCC-CCCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCCCCCCCCCC
Q psy9427 121 NLCRDS-NPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQCP 169 (324)
Q Consensus 121 ~~C~~~-~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~~~~eC~ 169 (324)
|||+.. ..|. +.|+| ++|+|+|.|++||++......|.+++||.
T Consensus 2 dEC~~~~~~C~--~~C~n---t~Gsy~C~C~~Gy~L~~d~~~C~didec~ 46 (55)
T 2jkh_L 2 KLCSLDNGDCD--QFCHE---EQNSVVCSCARGYTLADNGKACIPTGPYP 46 (55)
T ss_dssp CCTTTGGGGCS--SEEEE---ETTEEEEECCTTEEECTTSSCEEESSSSC
T ss_pred ccccCCCCCcC--cEeEc---CCCCeEEeCCCCCEECCCCCeeccCcccc
Confidence 667332 2573 59999 99999999999999777667899999883
No 76
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=97.29 E-value=0.00025 Score=52.40 Aligned_cols=67 Identities=24% Similarity=0.666 Sum_probs=53.0
Q ss_pred CCCCCCCCEEee-CCCCcEeeCCCCCcCCCCCCCcccccC-CCCCCCC-CCCCCCeeecCCCCC-----CCeeeeCCCCC
Q psy9427 82 SGACGTNAVCIP-EDHRPVCHCPVGTHPSPSPDVHCARES-NLCRDSN-PCHPTARCEDTGATN-----GKVVCSCPELS 153 (324)
Q Consensus 82 ~~~C~~~~~C~~-~~~~~~C~C~~G~~g~~~~~~~C~~~~-~~C~~~~-~C~~~~~C~~~~~~~-----g~~~C~C~~G~ 153 (324)
...|..+|.|.+ .++...|+|.+||.+++ ..|..+. ..|+..+ -|..+|+|.. +. +..+|+|.+||
T Consensus 9 ~~~C~~NA~C~r~~~g~e~C~C~~gy~gdg---~~Cv~~~~~sC~~nNGGCd~nA~C~~---~~~~~~~~ki~C~C~~g~ 82 (99)
T 1ob1_C 9 KKQCPQNSGCFRHLDEREECKCLLNYKQEG---DKCVENPNPTCNENNGGCDADAKCTE---EDSGSNGKKITCECTKPD 82 (99)
T ss_dssp SCCCCTTEEEECCTTSCCEEEECTTEEEET---TEEEECSCCCSTTGGGGCCTTEEEEC---CSCSSSSCCCEEEECSTT
T ss_pred cCCCCCCCCeEEcCCCCEEEEecCCeecCC---CeEeeCCCCChhhcCCCcCCCceeEe---cCCcccCCceEeEeCCCC
Confidence 356778999987 57889999999999977 6788762 4674332 5999999997 53 67999999997
Q ss_pred c
Q psy9427 154 V 154 (324)
Q Consensus 154 ~ 154 (324)
.
T Consensus 83 ~ 83 (99)
T 1ob1_C 83 S 83 (99)
T ss_dssp C
T ss_pred c
Confidence 5
No 77
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.27 E-value=0.00013 Score=46.55 Aligned_cols=36 Identities=36% Similarity=0.736 Sum_probs=29.8
Q ss_pred cCCCCC---CCCCCCCEEeeCC--CCcEeeCCCCCcCCCCCCCcccc
Q psy9427 77 IPACDS---GACGTNAVCIPED--HRPVCHCPVGTHPSPSPDVHCAR 118 (324)
Q Consensus 77 i~~C~~---~~C~~~~~C~~~~--~~~~C~C~~G~~g~~~~~~~C~~ 118 (324)
|++|.+ +||.+ ++|+... ++|.|.|++||+| ..|+.
T Consensus 3 i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG-----~~Ce~ 43 (46)
T 1k36_A 3 ITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTG-----VRCEH 43 (46)
T ss_dssp EECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSS-----TTSCC
T ss_pred cccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCcc-----CCCCc
Confidence 677876 89988 7999754 6899999999999 77764
No 78
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=97.25 E-value=0.00021 Score=46.78 Aligned_cols=32 Identities=22% Similarity=0.467 Sum_probs=26.0
Q ss_pred CCCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCCCC
Q psy9427 127 NPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCV 163 (324)
Q Consensus 127 ~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~ 163 (324)
.+|. ++|+| ++|+|+|.|++||++......|.
T Consensus 20 ~~C~--~~C~n---~~Gsy~C~C~~Gy~~~~d~~~C~ 51 (53)
T 1apq_A 20 PQCQ--HLCHN---YVGGYFCSCRPGYELQEDRHSCQ 51 (53)
T ss_dssp CTTS--SEEEE---ETTEEEEECSTTCEECTTSSCEE
T ss_pred CCCC--CEeEC---CCCCeEEECCCCCeECCCCCccC
Confidence 5784 69999 99999999999999876544453
No 79
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=97.22 E-value=0.00012 Score=50.05 Aligned_cols=32 Identities=25% Similarity=0.604 Sum_probs=27.8
Q ss_pred cCCCCCCCCCCCEeee-----CCCceeeeeCCCeeecC
Q psy9427 15 NSCDGVSCGVNAVCVV-----NNHEARCFCPPGSYVGD 47 (324)
Q Consensus 15 ~~C~~~~C~~~~~C~~-----~~~~~~C~C~~G~y~g~ 47 (324)
++|..+||.++|+|++ ..++|+|.|++| |+|.
T Consensus 7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~G-f~G~ 43 (63)
T 1hae_A 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPG-FTGA 43 (63)
T ss_dssp CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTT-EEST
T ss_pred CCCCCCcCCCCcEEecCCccCCCCCEEEECCCC-CcCC
Confidence 4677789999999996 678999999999 9985
No 80
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=97.21 E-value=0.0007 Score=50.38 Aligned_cols=65 Identities=25% Similarity=0.543 Sum_probs=53.8
Q ss_pred CCCCCCCEEee-CCCCcEeeCCCCCcCCCCCCCcccccCCC-CCCCC-CCCCCCeeecCCCC-CCCeeeeCCCCCc
Q psy9427 83 GACGTNAVCIP-EDHRPVCHCPVGTHPSPSPDVHCARESNL-CRDSN-PCHPTARCEDTGAT-NGKVVCSCPELSV 154 (324)
Q Consensus 83 ~~C~~~~~C~~-~~~~~~C~C~~G~~g~~~~~~~C~~~~~~-C~~~~-~C~~~~~C~~~~~~-~g~~~C~C~~G~~ 154 (324)
..|..+|.|.. .++...|+|..||.+++ ..|..+ +. |+..+ -|+.+|.|.. + +....|.|..+|.
T Consensus 16 t~Cp~NA~C~r~~~G~e~CrCl~gY~~dg---~~Cv~~-Np~C~~nNGGCd~nAeC~~---~~~~ki~C~C~~~~~ 84 (105)
T 1n1i_A 16 TNVPENAACYRYLDGTEEWRCLLGFKEVG---GKCVPA-SITCEENNGGCAPEAECTM---DDKKEVECKCTKEGS 84 (105)
T ss_dssp SCCCTTEEEEECTTSCEEEEECTTEEECS---SSEEEC-CCCTTSGGGGSCTTSEEEE---CTTSCEEEECCSTTC
T ss_pred CCCCCCCCeEECCCCCEeEEEECCeeccC---CEEEEC-CcchhhcCCCcCCCcEeEE---CCCCEEEeECCCCCC
Confidence 45778899997 78889999999999987 789988 77 73333 5999999998 5 4789999999974
No 81
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.17 E-value=0.00026 Score=45.13 Aligned_cols=32 Identities=25% Similarity=0.557 Sum_probs=27.0
Q ss_pred ccCCCC---CCCCCCCEeeeCC--CceeeeeCCCeeecC
Q psy9427 14 WNSCDG---VSCGVNAVCVVNN--HEARCFCPPGSYVGD 47 (324)
Q Consensus 14 ~~~C~~---~~C~~~~~C~~~~--~~~~C~C~~G~y~g~ 47 (324)
+++|.. +||.+ ++|+... ++|+|.|++| |+|.
T Consensus 3 i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~G-ytG~ 39 (46)
T 1k36_A 3 ITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVG-YTGV 39 (46)
T ss_dssp EECCCTTCCSSCSS-EEEEEETTTTEEEEEECTT-CSST
T ss_pred cccCCCCCCCCCCC-CEeeccCCCCCEEEECCCC-CccC
Confidence 567887 89998 7998744 6899999999 9995
No 82
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=97.12 E-value=6.2e-05 Score=49.43 Aligned_cols=31 Identities=23% Similarity=0.489 Sum_probs=25.0
Q ss_pred CCCCCCCEEee----CCCCcEeeCCCCCcCCCCCCCcccc
Q psy9427 83 GACGTNAVCIP----EDHRPVCHCPVGTHPSPSPDVHCAR 118 (324)
Q Consensus 83 ~~C~~~~~C~~----~~~~~~C~C~~G~~g~~~~~~~C~~ 118 (324)
+||.++++|++ ..++|.|.|++||+| ..|+.
T Consensus 14 ~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G-----~~Ce~ 48 (52)
T 3ca7_A 14 WYCLNDAHCFAVKIADLPVYSCECAIGFMG-----QRCEY 48 (52)
T ss_dssp HTSCTTCEEEEEEETTEEEEEEECCTTEES-----TTSCE
T ss_pred CcCCCCCEEecCccCCCCCEEEECCCCCcC-----CCCcc
Confidence 46778889986 356899999999999 77764
No 83
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=97.11 E-value=0.00036 Score=45.66 Aligned_cols=32 Identities=19% Similarity=0.401 Sum_probs=25.5
Q ss_pred CCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCccc
Q psy9427 83 GACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCA 117 (324)
Q Consensus 83 ~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~ 117 (324)
.+|. ++|+++.++|.|.|++||++.... +.|.
T Consensus 20 ~~C~--~~C~n~~Gsy~C~C~~Gy~~~~d~-~~C~ 51 (53)
T 1apq_A 20 PQCQ--HLCHNYVGGYFCSCRPGYELQEDR-HSCQ 51 (53)
T ss_dssp CTTS--SEEEEETTEEEEECSTTCEECTTS-SCEE
T ss_pred CCCC--CEeECCCCCeEEECCCCCeECCCC-CccC
Confidence 4675 599999999999999999986543 5554
No 84
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=97.07 E-value=0.00039 Score=48.73 Aligned_cols=25 Identities=16% Similarity=0.207 Sum_probs=21.1
Q ss_pred CCCCCCeeeeCCCCceee-CCCCCcc
Q psy9427 193 ACGPNALCRAVGKRPVCA-CPDGFSA 217 (324)
Q Consensus 193 ~C~~~~~C~~~~g~y~C~-C~~Gy~g 217 (324)
+|..+++|+|+.|+|+|. ++.||++
T Consensus 12 ~C~~~~~C~Nt~Gsy~C~~~~~g~~~ 37 (71)
T 2kl7_A 12 ACKGEMKCINHYGGYLCLPRSAAVIN 37 (71)
T ss_dssp SCTTEEEEEETTCCEEEEETTSCCCS
T ss_pred CCCCCCEeECCCCCeEecccCCcccc
Confidence 477788999999999998 5678875
No 85
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=97.03 E-value=0.00068 Score=55.51 Aligned_cols=33 Identities=27% Similarity=0.685 Sum_probs=26.2
Q ss_pred CCCCCCEeeeCC--Cceee-eeCCCeeecCCCCCCcc
Q psy9427 21 SCGVNAVCVVNN--HEARC-FCPPGSYVGDPNIECRQ 54 (324)
Q Consensus 21 ~C~~~~~C~~~~--~~~~C-~C~~G~y~g~~~~~C~~ 54 (324)
||.++++|.... +.++| .|++| |+|.....|.+
T Consensus 2 ~C~~~g~C~~~~~~g~~~C~~C~~g-~~G~~Ce~C~~ 37 (162)
T 1klo_A 2 PCPGGSSCAIVPKTKEVVCTHCPTG-TAGKRCELCDD 37 (162)
T ss_dssp CSCTTCCEEECSSSCCEEECSCCTT-EESTTSCEECT
T ss_pred cCcCcCcccccCCCCCEEeCCCCCC-CcCCCCcCCCC
Confidence 688899998765 67899 79999 99976665554
No 86
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=96.98 E-value=0.00025 Score=49.39 Aligned_cols=45 Identities=27% Similarity=0.530 Sum_probs=36.2
Q ss_pred ccCCCCCCCC-CCCCCCeeecCCCCCC-CeeeeCCCCCccCCCCCCCCCCCCC
Q psy9427 118 RESNLCRDSN-PCHPTARCEDTGATNG-KVVCSCPELSVGDPYKTGCVPQGQC 168 (324)
Q Consensus 118 ~~~~~C~~~~-~C~~~~~C~~~~~~~g-~~~C~C~~G~~g~~~~~~C~~~~eC 168 (324)
++ ++|+..+ .| ...|++ ++| +|+|.|++||.+....+.|.+++||
T Consensus 4 d~-~eC~~~nggC--~h~C~n---~~g~s~~C~C~~Gy~L~~D~~tC~d~dec 50 (69)
T 1kli_L 4 DQ-LICVNENGGC--EQYCSD---HTGTKRSCRCHEGYSLLADGVSCTPTVEY 50 (69)
T ss_dssp CC-CCTTSGGGGC--SSEEEE---ETTTEEEEECCTTEEECTTSSCEEECSSS
T ss_pred cc-ccccCCCCCc--CCEeEc---CCCCCEEEeCCCCCeECCCCCcccCcccc
Confidence 44 8884333 46 568999 898 8999999999987777889999987
No 87
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=96.95 E-value=0.0005 Score=47.84 Aligned_cols=43 Identities=19% Similarity=0.397 Sum_probs=34.1
Q ss_pred cCCCCCC--CCCCCCEEeeCCC-CcEeeCCCCCcCCCCCCCcccccCCCC
Q psy9427 77 IPACDSG--ACGTNAVCIPEDH-RPVCHCPVGTHPSPSPDVHCARESNLC 123 (324)
Q Consensus 77 i~~C~~~--~C~~~~~C~~~~~-~~~C~C~~G~~g~~~~~~~C~~~~~~C 123 (324)
+++|... .|. ..|+++.+ +|.|.|++||.+.+.. ++|.++ +++
T Consensus 5 ~~eC~~~nggC~--h~C~n~~g~s~~C~C~~Gy~L~~D~-~tC~d~-dec 50 (69)
T 1kli_L 5 QLICVNENGGCE--QYCSDHTGTKRSCRCHEGYSLLADG-VSCTPT-VEY 50 (69)
T ss_dssp CCCTTSGGGGCS--SEEEEETTTEEEEECCTTEEECTTS-SCEEEC-SSS
T ss_pred cccccCCCCCcC--CEeEcCCCCCEEEeCCCCCeECCCC-CcccCc-ccc
Confidence 6677543 353 58999998 8999999999976654 899998 887
No 88
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=96.91 E-value=0.0034 Score=46.67 Aligned_cols=68 Identities=22% Similarity=0.483 Sum_probs=53.0
Q ss_pred CCCCCCCCCCCEeee-CCCceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCC-CCC--CCCCCCCEE
Q psy9427 16 SCDGVSCGVNAVCVV-NNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPA-CDS--GACGTNAVC 91 (324)
Q Consensus 16 ~C~~~~C~~~~~C~~-~~~~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~-C~~--~~C~~~~~C 91 (324)
.|....|..||.|.. .+|...|.|..| |+++. ..|.. +++ |.. +-|..+|.|
T Consensus 12 ~C~~t~Cp~NA~C~r~~~G~e~CrCl~g-Y~~dg-~~Cv~----------------------~Np~C~~nNGGCd~nAeC 67 (105)
T 1n1i_A 12 KCIDTNVPENAACYRYLDGTEEWRCLLG-FKEVG-GKCVP----------------------ASITCEENNGGCAPEAEC 67 (105)
T ss_dssp SCCSSCCCTTEEEEECTTSCEEEEECTT-EEECS-SSEEE----------------------CCCCTTSGGGGSCTTSEE
T ss_pred EecCCCCCCCCCeEECCCCCEeEEEECC-eeccC-CEEEE----------------------CCcchhhcCCCcCCCcEe
Confidence 355556889999997 789999999999 99863 34665 444 432 348889999
Q ss_pred eeCC-CCcEeeCCCCCc
Q psy9427 92 IPED-HRPVCHCPVGTH 107 (324)
Q Consensus 92 ~~~~-~~~~C~C~~G~~ 107 (324)
+.+. ..-.|.|..+|.
T Consensus 68 ~~~~~~ki~C~C~~~~~ 84 (105)
T 1n1i_A 68 TMDDKKEVECKCTKEGS 84 (105)
T ss_dssp EECTTSCEEEECCSTTC
T ss_pred EECCCCEEEeECCCCCC
Confidence 9885 789999999975
No 89
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=96.90 E-value=0.0015 Score=48.29 Aligned_cols=69 Identities=28% Similarity=0.689 Sum_probs=51.6
Q ss_pred CCCCCCCCCCEeee-CCCceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCCCCC--CCCCCCCEEee
Q psy9427 17 CDGVSCGVNAVCVV-NNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACDS--GACGTNAVCIP 93 (324)
Q Consensus 17 C~~~~C~~~~~C~~-~~~~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~~--~~C~~~~~C~~ 93 (324)
|....|..||.|.. .++...|.|.+| |+++. ..|..++ .+.|.. +-|..+|.|+.
T Consensus 7 C~~~~C~~NA~C~r~~~g~e~C~C~~g-y~gdg-~~Cv~~~--------------------~~sC~~nNGGCd~nA~C~~ 64 (99)
T 1ob1_C 7 CVKKQCPQNSGCFRHLDEREECKCLLN-YKQEG-DKCVENP--------------------NPTCNENNGGCDADAKCTE 64 (99)
T ss_dssp CCSCCCCTTEEEECCTTSCCEEEECTT-EEEET-TEEEECS--------------------CCCSTTGGGGCCTTEEEEC
T ss_pred eccCCCCCCCCeEEcCCCCEEEEecCC-eecCC-CeEeeCC--------------------CCChhhcCCCcCCCceeEe
Confidence 55556889999987 589999999999 99864 3455510 135543 44888999997
Q ss_pred CC-----CCcEeeCCCCCc
Q psy9427 94 ED-----HRPVCHCPVGTH 107 (324)
Q Consensus 94 ~~-----~~~~C~C~~G~~ 107 (324)
+. +...|.|.+||.
T Consensus 65 ~~~~~~~~ki~C~C~~g~~ 83 (99)
T 1ob1_C 65 EDSGSNGKKITCECTKPDS 83 (99)
T ss_dssp CSCSSSSCCCEEEECSTTC
T ss_pred cCCcccCCceEeEeCCCCc
Confidence 65 679999999986
No 90
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=96.90 E-value=0.00073 Score=47.31 Aligned_cols=33 Identities=18% Similarity=0.383 Sum_probs=26.1
Q ss_pred ccCCCC--CCCCCCCEeeeCCCceeee-eCCCeeecC
Q psy9427 14 WNSCDG--VSCGVNAVCVVNNHEARCF-CPPGSYVGD 47 (324)
Q Consensus 14 ~~~C~~--~~C~~~~~C~~~~~~~~C~-C~~G~y~g~ 47 (324)
+|+|.. ++|..+++|+|+.++|+|. +..| |.++
T Consensus 3 idEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g-~~~~ 38 (71)
T 2kl7_A 3 VNECLTIPEACKGEMKCINHYGGYLCLPRSAA-VIND 38 (71)
T ss_dssp SCCTTCCCCSCTTEEEEEETTCCEEEEETTSC-CCSC
T ss_pred cccccCCCCCCCCCCEeECCCCCeEecccCCc-cccc
Confidence 677864 5799889999999999998 4456 6654
No 91
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=96.84 E-value=0.00016 Score=69.45 Aligned_cols=62 Identities=23% Similarity=0.616 Sum_probs=25.3
Q ss_pred cCCCCCCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccC
Q psy9427 77 IPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGD 156 (324)
Q Consensus 77 i~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~ 156 (324)
+++|.. +|.+ ++|+.. +.|.|++||+| ..|+ + ++| .. +|.++++|++ . ++|.|++||+|.
T Consensus 392 ~~~C~~-~C~n-G~C~~~---~~C~C~~G~~G-----~~C~-~-~~C-~~-~C~~~g~C~~---~---~~C~C~~G~~G~ 451 (463)
T 2wg3_C 392 TSECSR-LCRN-GYCTPT---GKCCCSPGWEG-----DFCR-T-AKC-EP-ACRHGGVCVR---P---NKCLCKKGYLGP 451 (463)
T ss_dssp CCHHHH-HCCS-EEECTT---SCEEECTTEES-----TTSC-E-ECC---------------------------------
T ss_pred cccccC-CCCC-CccCCC---CeECCCCCcCC-----CcCC-c-CcC-CC-CCCCCCEECC---C---CEEECCCCcccC
Confidence 445542 5775 789753 48999999999 7885 3 678 44 8998999987 4 799999999998
Q ss_pred CC
Q psy9427 157 PY 158 (324)
Q Consensus 157 ~~ 158 (324)
.+
T Consensus 452 ~C 453 (463)
T 2wg3_C 452 QC 453 (463)
T ss_dssp --
T ss_pred CC
Confidence 74
No 92
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=96.84 E-value=0.00047 Score=44.93 Aligned_cols=33 Identities=18% Similarity=0.381 Sum_probs=28.2
Q ss_pred CEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCC
Q psy9427 89 AVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLC 123 (324)
Q Consensus 89 ~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C 123 (324)
+.|+++.++|+|.|++||++.+.. ++|+++ +|+
T Consensus 10 ~~C~n~~gs~~C~C~~Gy~L~~d~-~tC~di-de~ 42 (51)
T 1kig_L 10 QFCREERSEVRCSCAHGYVLGDDS-KSCVST-ERF 42 (51)
T ss_dssp SCCCEETTEECCCCCTTEEECTTS-SCEEEC-SSS
T ss_pred CEeEcCCCCeEEeCCCCcEECCCC-CccccC-Ccc
Confidence 479999999999999999965544 889998 877
No 93
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=96.81 E-value=0.00045 Score=67.34 Aligned_cols=55 Identities=16% Similarity=0.401 Sum_probs=12.1
Q ss_pred CcEeeCCCCCcCCCCCCCcccc----------cCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccCCC
Q psy9427 97 RPVCHCPVGTHPSPSPDVHCAR----------ESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDPY 158 (324)
Q Consensus 97 ~~~C~C~~G~~g~~~~~~~C~~----------~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~ 158 (324)
.+.|.|++||+| ..|+. .++.| .+.+|..++.+... .....++|+|++||+|..+
T Consensus 459 tg~C~C~~g~~G-----~~Ce~C~~G~~g~~~~~~~C-~~C~C~~~gs~~~~-C~~~tG~C~C~~G~~G~~C 523 (525)
T 4aqs_A 459 TGYCYCKRLVTG-----QRCDQCLPQHWGLSNDLDGC-RPCDCDLGGALNNS-CSEDSGQCSCLPHMIGRQC 523 (525)
T ss_dssp TCCBCBCTTCCS-----TTTCC--------------------------------------------------
T ss_pred CCEEECCCCCcC-----CCcccCCCCccCCCCCCCCC-cCCCCCCCCccCCc-cCCCCCeeECCCCCcCCCC
Confidence 457889999988 55531 12556 55577666655430 0123458999999999863
No 94
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=96.77 E-value=0.00047 Score=56.12 Aligned_cols=41 Identities=17% Similarity=0.378 Sum_probs=36.9
Q ss_pred cCCCCCCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCC
Q psy9427 77 IPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLC 123 (324)
Q Consensus 77 i~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C 123 (324)
+++|...+|.++++|++..++|.|.|++||.| ..|+.+ ++|
T Consensus 119 ~~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G-----~~Ce~~-~~c 159 (162)
T 1g1s_A 119 TASCQDMSCSKQGECLETIGNYTCSCYPGFYG-----PECEYV-RDD 159 (162)
T ss_dssp ECCCCTTGGGGSEEEEECSSSEEEEECTTEES-----TTSCEE-CC-
T ss_pred eCCCcCCCCCCCCEEecCCCCceEeCCCCCcC-----cccccC-ccc
Confidence 67888889999999999999999999999999 889988 788
No 95
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=96.62 E-value=0.0006 Score=44.42 Aligned_cols=34 Identities=24% Similarity=0.446 Sum_probs=29.6
Q ss_pred CCeeecCCCCCCCeeeeCCCCCccCCCCCCCCCCCCC
Q psy9427 132 TARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQC 168 (324)
Q Consensus 132 ~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~~~~eC 168 (324)
.+.|+| ++|+|+|.|++||++......|.+++|+
T Consensus 9 ~~~C~n---~~gs~~C~C~~Gy~L~~d~~tC~dide~ 42 (51)
T 1kig_L 9 DQFCRE---ERSEVRCSCAHGYVLGDDSKSCVSTERF 42 (51)
T ss_dssp SSCCCE---ETTEECCCCCTTEEECTTSSCEEECSSS
T ss_pred CCEeEc---CCCCeEEeCCCCcEECCCCCccccCCcc
Confidence 357999 9999999999999987766789999887
No 96
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=96.61 E-value=0.0014 Score=43.05 Aligned_cols=29 Identities=28% Similarity=0.633 Sum_probs=25.1
Q ss_pred CCCCCCCCEee--eCCCceeeeeCCCeeecCC
Q psy9427 19 GVSCGVNAVCV--VNNHEARCFCPPGSYVGDP 48 (324)
Q Consensus 19 ~~~C~~~~~C~--~~~~~~~C~C~~G~y~g~~ 48 (324)
.+||.++++|+ +..++|+|.|++| |+|..
T Consensus 11 ~~pC~nGG~C~~~~~~~~~~C~C~~G-ytG~~ 41 (53)
T 1nql_B 11 DGYCLHDGVCMYIEALDKYACNCVVG-YIGER 41 (53)
T ss_dssp CCEECTTCEEEEETTTTEEEEEECTT-EESTT
T ss_pred CCCCCCCeEEeeecCCCCEEEecCCC-CcCCC
Confidence 46899999998 5678899999999 99953
No 97
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=96.53 E-value=0.00057 Score=60.65 Aligned_cols=42 Identities=19% Similarity=0.411 Sum_probs=35.2
Q ss_pred cCCCC--CCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCC
Q psy9427 77 IPACD--SGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNL 122 (324)
Q Consensus 77 i~~C~--~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~ 122 (324)
+|||. ..+|..++.|+|+.++|.|.|++||.|++ ..|.++ |+
T Consensus 5 iDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG---~~C~d~-d~ 48 (285)
T 1gl4_A 5 QQTCANNRHQCSVHAECRDYATGFCCRCVANYTGNG---RQCVAE-GS 48 (285)
T ss_dssp --CHHHHGGGSCTTEEEEECSSCEEEEECTTEEECS---SSEEET-TC
T ss_pred chhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCCC---CcCCCC-CC
Confidence 78886 46899899999999999999999999887 789887 54
No 98
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=96.52 E-value=0.0009 Score=43.95 Aligned_cols=34 Identities=26% Similarity=0.439 Sum_probs=29.9
Q ss_pred CCeeecCCCCCC-CeeeeCCCCCccCCCCCCCCCCCCC
Q psy9427 132 TARCEDTGATNG-KVVCSCPELSVGDPYKTGCVPQGQC 168 (324)
Q Consensus 132 ~~~C~~~~~~~g-~~~C~C~~G~~g~~~~~~C~~~~eC 168 (324)
...|++ +++ +|+|.|++||++....+.|.+++||
T Consensus 10 ~~~C~n---~~ggs~~C~C~~Gy~L~~Dg~tC~d~dec 44 (53)
T 2bz6_L 10 EQYCSD---HTGTKRSCRCHEGYSLLADGVSCTPTVEY 44 (53)
T ss_dssp SSEEEE---ETTTEEEEECCTTEEECTTSSCEEECSSS
T ss_pred CCEeEc---CCCCCEEeeCCCCCEECCCCCcccCCccc
Confidence 467999 898 7999999999987767789999988
No 99
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=96.51 E-value=0.0016 Score=42.75 Aligned_cols=33 Identities=18% Similarity=0.367 Sum_probs=28.5
Q ss_pred CEEeeCCC-CcEeeCCCCCcCCCCCCCcccccCCCC
Q psy9427 89 AVCIPEDH-RPVCHCPVGTHPSPSPDVHCARESNLC 123 (324)
Q Consensus 89 ~~C~~~~~-~~~C~C~~G~~g~~~~~~~C~~~~~~C 123 (324)
..|+++.+ +|+|.|++||++.+.. ++|+++ +||
T Consensus 11 ~~C~n~~ggs~~C~C~~Gy~L~~Dg-~tC~d~-dec 44 (53)
T 2bz6_L 11 QYCSDHTGTKRSCRCHEGYSLLADG-VSCTPT-VEY 44 (53)
T ss_dssp SEEEEETTTEEEEECCTTEEECTTS-SCEEEC-SSS
T ss_pred CEeEcCCCCCEEeeCCCCCEECCCC-CcccCC-ccc
Confidence 57999998 7999999999976554 899998 888
No 100
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=96.37 E-value=0.00061 Score=60.49 Aligned_cols=45 Identities=24% Similarity=0.603 Sum_probs=35.1
Q ss_pred ccCCCCCC-CCCCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCCCCCCCCC
Q psy9427 118 RESNLCRD-SNPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQC 168 (324)
Q Consensus 118 ~~~~~C~~-~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~~~~eC 168 (324)
++ |||+. ..+|+.++.|+| +.|+|+|.|++||.|++ ..|.++++-
T Consensus 4 Di-DEC~~~~~~C~~~a~C~N---t~Gsy~C~C~~Gy~GnG--~~C~d~d~P 49 (285)
T 1gl4_A 4 AQ-QTCANNRHQCSVHAECRD---YATGFCCRCVANYTGNG--RQCVAEGSP 49 (285)
T ss_dssp ----CHHHHGGGSCTTEEEEE---CSSCEEEEECTTEEECS--SSEEETTCE
T ss_pred cc-hhccCCCCCCCCCCEeEc---CCCCeEEEcCCCCCCCC--CcCCCCCCC
Confidence 45 88832 358999999999 99999999999999987 358887653
No 101
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=96.26 E-value=0.0044 Score=50.63 Aligned_cols=25 Identities=36% Similarity=0.813 Sum_probs=19.4
Q ss_pred CCCCCCEEeeCC--CCcEe-eCCCCCcC
Q psy9427 84 ACGTNAVCIPED--HRPVC-HCPVGTHP 108 (324)
Q Consensus 84 ~C~~~~~C~~~~--~~~~C-~C~~G~~g 108 (324)
||.++++|.... +.++| .|++||+|
T Consensus 2 ~C~~~g~C~~~~~~g~~~C~~C~~g~~G 29 (162)
T 1klo_A 2 PCPGGSSCAIVPKTKEVVCTHCPTGTAG 29 (162)
T ss_dssp CSCTTCCEEECSSSCCEEECSCCTTEES
T ss_pred cCcCcCcccccCCCCCEEeCCCCCCCcC
Confidence 466778888655 56889 69999988
No 102
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=96.26 E-value=0.0014 Score=43.01 Aligned_cols=33 Identities=27% Similarity=0.634 Sum_probs=27.8
Q ss_pred CCCCCCCCEEe--eCCCCcEeeCCCCCcCCCCCCCccccc
Q psy9427 82 SGACGTNAVCI--PEDHRPVCHCPVGTHPSPSPDVHCARE 119 (324)
Q Consensus 82 ~~~C~~~~~C~--~~~~~~~C~C~~G~~g~~~~~~~C~~~ 119 (324)
.+||.++++|+ +..++|.|.|++||+| ..|+..
T Consensus 11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG-----~~Ce~~ 45 (53)
T 1nql_B 11 DGYCLHDGVCMYIEALDKYACNCVVGYIG-----ERCQYR 45 (53)
T ss_dssp CCEECTTCEEEEETTTTEEEEEECTTEES-----TTSCEE
T ss_pred CCCCCCCeEEeeecCCCCEEEecCCCCcC-----CCCCcC
Confidence 46898999998 5678899999999999 778643
No 103
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=96.21 E-value=0.0016 Score=62.38 Aligned_cols=59 Identities=32% Similarity=0.867 Sum_probs=18.2
Q ss_pred CCCCCCEeeeCCCceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCCCCCCCCCCCCEEeeCCCCcEe
Q psy9427 21 SCGVNAVCVVNNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACDSGACGTNAVCIPEDHRPVC 100 (324)
Q Consensus 21 ~C~~~~~C~~~~~~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~~~~C~~~~~C~~~~~~~~C 100 (324)
+|.+ ++|+.. ++|.|++| |+|.. |. +++|.+ +|.++++|++. +.|
T Consensus 398 ~C~n-G~C~~~---~~C~C~~G-~~G~~---C~-----------------------~~~C~~-~C~~~g~C~~~---~~C 442 (463)
T 2wg3_C 398 LCRN-GYCTPT---GKCCCSPG-WEGDF---CR-----------------------TAKCEP-ACRHGGVCVRP---NKC 442 (463)
T ss_dssp HCCS-EEECTT---SCEEECTT-EESTT---SC-----------------------EECC--------------------
T ss_pred CCCC-CccCCC---CeECCCCC-cCCCc---CC-----------------------cCcCCC-CCCCCCEECCC---CEE
Confidence 4664 678643 36888888 87753 22 456764 88888999865 689
Q ss_pred eCCCCCcCCCCCCCccccc
Q psy9427 101 HCPVGTHPSPSPDVHCARE 119 (324)
Q Consensus 101 ~C~~G~~g~~~~~~~C~~~ 119 (324)
.|++||+| ..|+..
T Consensus 443 ~C~~G~~G-----~~C~~~ 456 (463)
T 2wg3_C 443 LCKKGYLG-----PQCEQV 456 (463)
T ss_dssp -------------------
T ss_pred ECCCCccc-----CCCCCC
Confidence 99999999 777654
No 104
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=96.08 E-value=0.0052 Score=41.18 Aligned_cols=41 Identities=20% Similarity=0.459 Sum_probs=31.5
Q ss_pred CEEeeCC-CCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeec
Q psy9427 89 AVCIPED-HRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCED 137 (324)
Q Consensus 89 ~~C~~~~-~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~ 137 (324)
..|+++. ++|.|.|++||.+.+.. +.|+++ ...|| ...|+|
T Consensus 11 ~~C~n~~~gs~~C~C~~Gy~L~~D~-~tC~d~-----~~~pC--~~~c~n 52 (59)
T 2wph_E 11 QFCKNSADNKVVCSCTEGYRLAENQ-KSCEPA-----VPFPC--GRVSVS 52 (59)
T ss_dssp SEEEECSTTCEEEECCTTEEECTTS-SCEEES-----SSSCT--TCCCSC
T ss_pred CEeEeCCCCCEEeeCCCCcEECCCC-CcccCC-----CCCCC--CCcccc
Confidence 5899998 69999999999976554 789887 33466 355666
No 105
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=96.00 E-value=0.0042 Score=40.47 Aligned_cols=27 Identities=26% Similarity=0.570 Sum_probs=23.3
Q ss_pred CCCCCCCEeee----CCCceeeeeCCCeeecC
Q psy9427 20 VSCGVNAVCVV----NNHEARCFCPPGSYVGD 47 (324)
Q Consensus 20 ~~C~~~~~C~~----~~~~~~C~C~~G~y~g~ 47 (324)
+||.++|+|++ ..++|+|.|++| |+|.
T Consensus 14 ~pC~NGGtC~~~~~~~~~~y~C~C~~G-f~G~ 44 (52)
T 3ca7_A 14 WYCLNDAHCFAVKIADLPVYSCECAIG-FMGQ 44 (52)
T ss_dssp HTSCTTCEEEEEEETTEEEEEEECCTT-EEST
T ss_pred CcCCCCCEEecCccCCCCCEEEECCCC-CcCC
Confidence 58999999996 356899999999 9995
No 106
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=95.98 E-value=0.0048 Score=57.92 Aligned_cols=97 Identities=23% Similarity=0.546 Sum_probs=30.9
Q ss_pred CCCC-CEeeeCCCceeeeeCCCeeecCCCCCCccc----CCCCCCcCC----CCCcee---CCCCcccCCCC--CCCCCC
Q psy9427 22 CGVN-AVCVVNNHEARCFCPPGSYVGDPNIECRQV----PCVHNHDCS----TSHACD---LLSHTCIPACD--SGACGT 87 (324)
Q Consensus 22 C~~~-~~C~~~~~~~~C~C~~G~y~g~~~~~C~~~----~C~~~~~C~----~~~~C~---c~~~~Ci~~C~--~~~C~~ 87 (324)
|..+ +.|....+.+.|.|+.| |+|...+.|.+. |++.+..++ ....|. |... .+.|. ..+|.+
T Consensus 299 CnGHas~C~~~~g~~~C~C~~~-ttG~~CE~C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~--g~~CD~~t~~C~n 375 (426)
T 3zyj_B 299 CNLHATVCVYDNSKLTCECEHN-TTGPDCGKCKKNYQGRPWSPGSYLPIPKGAANACIPSISSIG--TNVCDNELLHCQN 375 (426)
T ss_dssp CSSSCSCEEEETTEEEECCCTT-EESSSSCEECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC------------------
T ss_pred CCCchhhcCCCCCCceeeCCCC-CcCCCccccccccccCcccCCcccccCCCCCCcccCCCCCCC--cCccccCcccCCC
Confidence 5444 48988778899999999 999877777652 454443221 112222 1100 12332 258888
Q ss_pred CCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeec
Q psy9427 88 NAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCED 137 (324)
Q Consensus 88 ~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~ 137 (324)
+++|++.. .|.|++||.| ..|+. .+|..++.|..
T Consensus 376 gg~C~~~~---~C~C~~G~~G-----~~Ce~--------c~C~~~g~C~~ 409 (426)
T 3zyj_B 376 GGTCHNNV---RCLCPAAYTG-----ILCEK--------LRCEEAGSCGS 409 (426)
T ss_dssp --------------------------------------------------
T ss_pred CCCcCCCC---CCcCCCCCcC-----CCCcC--------CCCCCCCcccC
Confidence 89998655 8999999999 55532 25666777765
No 107
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=95.87 E-value=0.0045 Score=50.13 Aligned_cols=36 Identities=33% Similarity=0.823 Sum_probs=30.9
Q ss_pred cCCCCCCCCCCCEeeeCCCceeeeeCCCeeecCCCCCCcc
Q psy9427 15 NSCDGVSCGVNAVCVVNNHEARCFCPPGSYVGDPNIECRQ 54 (324)
Q Consensus 15 ~~C~~~~C~~~~~C~~~~~~~~C~C~~G~y~g~~~~~C~~ 54 (324)
++|...||.++++|++..++|.|+|++| |.|. .|..
T Consensus 120 ~~c~~~~C~~~g~C~~~~~~~~c~C~~g-~~G~---~Ce~ 155 (162)
T 1g1s_A 120 ASCQDMSCSKQGECLETIGNYTCSCYPG-FYGP---ECEY 155 (162)
T ss_dssp CCCCTTGGGGSEEEEECSSSEEEEECTT-EEST---TSCE
T ss_pred CCCcCCCCCCCCEEecCCCCceEeCCCC-CcCc---cccc
Confidence 4577889999999999999999999999 9984 4555
No 108
>1oig_A Dumpy, CG33196-PB; structural protein; NMR {Drosophila melanogaster} SCOP: g.3.18.1
Probab=95.21 E-value=0.01 Score=32.38 Aligned_cols=23 Identities=22% Similarity=0.785 Sum_probs=10.2
Q ss_pred CCCCCCccCCCCCcCCCCcccCCC
Q psy9427 232 ACAGDQECLAGEEKCIGGRCRVAC 255 (324)
Q Consensus 232 ~C~~~~~C~~~~~~C~~~~C~~~C 255 (324)
||..+++|+ ...+|+|.+|+++|
T Consensus 3 EC~~~sdCp-~~~aC~n~kC~dPC 25 (26)
T 1oig_A 3 ECVLNSDCP-SNQACVNQKCRDPX 25 (26)
T ss_dssp SCCSSTTSS-TTCEECSSSEECC-
T ss_pred cccccCcCC-cCHhhhcCcccCCC
Confidence 444455554 23344444444443
No 109
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=94.91 E-value=0.016 Score=38.55 Aligned_cols=27 Identities=26% Similarity=0.591 Sum_probs=22.8
Q ss_pred CCCCCCEeee----CCCceeeeeCCCeeecCC
Q psy9427 21 SCGVNAVCVV----NNHEARCFCPPGSYVGDP 48 (324)
Q Consensus 21 ~C~~~~~C~~----~~~~~~C~C~~G~y~g~~ 48 (324)
||.++|+|+. ..++|.|.|++| |+|..
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~G-f~G~~ 45 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIG-FMGQR 45 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTT-EESSS
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCC-CccCC
Confidence 8999999983 456799999999 99953
No 110
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=94.84 E-value=0.014 Score=39.03 Aligned_cols=32 Identities=31% Similarity=0.550 Sum_probs=26.8
Q ss_pred CCeeecCCCCC-CCeeeeCCCCCccCCCCCCCCCCC
Q psy9427 132 TARCEDTGATN-GKVVCSCPELSVGDPYKTGCVPQG 166 (324)
Q Consensus 132 ~~~C~~~~~~~-g~~~C~C~~G~~g~~~~~~C~~~~ 166 (324)
...|++ ++ |+|+|.|++||.+......|.+++
T Consensus 10 ~~~C~n---~~~gs~~C~C~~Gy~L~~D~~tC~d~~ 42 (59)
T 2wph_E 10 EQFCKN---SADNKVVCSCTEGYRLAENQKSCEPAV 42 (59)
T ss_dssp SSEEEE---CSTTCEEEECCTTEEECTTSSCEEESS
T ss_pred CCEeEe---CCCCCEEeeCCCCcEECCCCCcccCCC
Confidence 468999 88 699999999999877667788764
No 111
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=94.75 E-value=0.033 Score=43.05 Aligned_cols=56 Identities=18% Similarity=0.443 Sum_probs=38.1
Q ss_pred CCCCCCEEeeCC--CCc-EeeCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccCC
Q psy9427 84 ACGTNAVCIPED--HRP-VCHCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDP 157 (324)
Q Consensus 84 ~C~~~~~C~~~~--~~~-~C~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~ 157 (324)
||.++++|++.. .+| .|.|++||+| ..|+..++ .+|..+ ....|++.+..++.|..
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G-----~~Ce~~~~-----~~C~~g--------~G~~YrG~~~~t~sG~~ 60 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGG-----QHCEIDKS-----KTCYEG--------NGHFYRGKASTDTMGRP 60 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEES-----TTSCEESS-----CCSBCS--------SCTTCCSCCCBBTTSCB
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCC-----ccccccCc-----CCCccc--------ccccceeeccccccCCc
Confidence 688999999874 556 9999999999 78876422 123211 12357777777777665
No 112
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=94.67 E-value=0.013 Score=39.13 Aligned_cols=31 Identities=23% Similarity=0.545 Sum_probs=25.7
Q ss_pred CCCCCCEEee----CCCCcEeeCCCCCcCCCCCCCccccc
Q psy9427 84 ACGTNAVCIP----EDHRPVCHCPVGTHPSPSPDVHCARE 119 (324)
Q Consensus 84 ~C~~~~~C~~----~~~~~~C~C~~G~~g~~~~~~~C~~~ 119 (324)
+|.++++|+. ..++|.|.|++||+| ..|+..
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G-----~~Ce~~ 49 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMG-----QRCEYK 49 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEES-----SSSCEE
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCcc-----CCCccc
Confidence 7889999983 445789999999999 778754
No 113
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=94.63 E-value=0.025 Score=55.51 Aligned_cols=35 Identities=23% Similarity=0.597 Sum_probs=30.5
Q ss_pred ccCCCCCCCCCCCEeee-CCCceeeeeC-CCeeecCCC
Q psy9427 14 WNSCDGVSCGVNAVCVV-NNHEARCFCP-PGSYVGDPN 49 (324)
Q Consensus 14 ~~~C~~~~C~~~~~C~~-~~~~~~C~C~-~G~y~g~~~ 49 (324)
+|+|.++||.++|+|++ ..++|.|.|+ +| |+|..+
T Consensus 1 vd~C~s~PC~ngG~C~~~~~~~y~C~C~~~G-~~G~~C 37 (587)
T 3nt1_A 1 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTG-FYGENC 37 (587)
T ss_dssp CCTTTTCCCCTTCEEEEEETTEEEEECTTSS-EETTTT
T ss_pred CCCCCCCCCCCCCEeeCCCCCCeEEecCCCC-ccCCCC
Confidence 57899999999999995 5589999999 99 999643
No 114
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=94.61 E-value=0.019 Score=56.04 Aligned_cols=35 Identities=29% Similarity=0.607 Sum_probs=31.4
Q ss_pred ccCCCCCCCCCCCEeee-CCCceeeeeC-CCeeecCCC
Q psy9427 14 WNSCDGVSCGVNAVCVV-NNHEARCFCP-PGSYVGDPN 49 (324)
Q Consensus 14 ~~~C~~~~C~~~~~C~~-~~~~~~C~C~-~G~y~g~~~ 49 (324)
+|+|.++||.++|+|++ ..++|+|.|+ +| |+|..+
T Consensus 2 ~d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G-~~G~~C 38 (553)
T 1q4g_A 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTG-YSGPNC 38 (553)
T ss_dssp CCGGGGCCCCTTCEEEEETTTEEEEECTTSS-EETTTT
T ss_pred CCcCCCCCCCCCCCcCCCCCCceEeeCCCCC-cCCCCC
Confidence 47899999999999999 8999999999 99 999643
No 115
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=94.34 E-value=0.024 Score=53.19 Aligned_cols=81 Identities=21% Similarity=0.534 Sum_probs=26.1
Q ss_pred CCCC-CeeecCCCCCCCeeeeCCCCCccCCCCCCCCCCC---CCCCCCCCC----CCCCcccCCcc---cCCCcc---CC
Q psy9427 129 CHPT-ARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQG---QCPRGDADC----PPSSRCSGGQC---VSVCQG---AC 194 (324)
Q Consensus 129 C~~~-~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~~~~---eC~~~~~~C----~~~~~C~~~~C---~d~C~~---~C 194 (324)
|..+ ..|.. ..+.++|.|+++++|..+. .|.+.- .+... ..+ .....|..-.| -+.|+. +|
T Consensus 299 CnGHas~C~~---~~g~~~C~C~~~ttG~~CE-~C~pgy~~~P~~~g-t~~p~~~g~~~~C~pC~Cn~~g~~CD~~t~~C 373 (426)
T 3zyj_B 299 CNLHATVCVY---DNSKLTCECEHNTTGPDCG-KCKKNYQGRPWSPG-SYLPIPKGAANACIPSISSIGTNVCDNELLHC 373 (426)
T ss_dssp CSSSCSCEEE---ETTEEEECCCTTEESSSSC-EECTTCCSSCCCCC-BCCSSSSCBCCCCCCCCC--------------
T ss_pred CCCchhhcCC---CCCCceeeCCCCCcCCCcc-ccccccccCcccCC-cccccCCCCCCcccCCCCCCCcCccccCcccC
Confidence 5433 47887 6778999999999998864 343321 11000 000 00112221111 223433 78
Q ss_pred CCCCeeeeCCCCceeeCCCCCcc
Q psy9427 195 GPNALCRAVGKRPVCACPDGFSA 217 (324)
Q Consensus 195 ~~~~~C~~~~g~y~C~C~~Gy~g 217 (324)
.++++|++.. +|.|++||.|
T Consensus 374 ~ngg~C~~~~---~C~C~~G~~G 393 (426)
T 3zyj_B 374 QNGGTCHNNV---RCLCPAAYTG 393 (426)
T ss_dssp -----------------------
T ss_pred CCCCCcCCCC---CCcCCCCCcC
Confidence 8999998765 8999999997
No 116
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=94.10 E-value=0.028 Score=45.41 Aligned_cols=41 Identities=20% Similarity=0.489 Sum_probs=33.9
Q ss_pred cCCCCCCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCC
Q psy9427 77 IPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLC 123 (324)
Q Consensus 77 i~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C 123 (324)
+..|.+.+|..+++|.+..++|.|.|.+||.| ..|+.+ .+|
T Consensus 119 ~~~~~~~~C~~~g~C~~~~~~~~c~C~~g~~g-----~~C~~~-~~c 159 (164)
T 3cfw_A 119 TASCQPWSCSGHGECVEIINNYTCNCDVGYYG-----PQCQFV-QVD 159 (164)
T ss_dssp ECCCCTTSSCSSEEEEEETTEEEEEECTTCBS-----SSSCBC----
T ss_pred cCCCCCCcCCCCCeecccCCCceeeeCCCccc-----cccccc-ccC
Confidence 56777788998999999999999999999999 788877 666
No 117
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=94.05 E-value=0.018 Score=47.11 Aligned_cols=51 Identities=22% Similarity=0.404 Sum_probs=35.7
Q ss_pred CCCcCCCCCCCcccccCCCCCCCC----CCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCCCCC
Q psy9427 104 VGTHPSPSPDVHCARESNLCRDSN----PCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVP 164 (324)
Q Consensus 104 ~G~~g~~~~~~~C~~~~~~C~~~~----~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~~ 164 (324)
+||.+. ..+.++ ++|.... +|. ..|++ +.|+|+|+|++||++......|++
T Consensus 113 ~Gf~~~----~~~~di-~eC~~~~~~~~~C~--~~C~n---~~g~~~C~C~~Gy~l~~d~~~C~~ 167 (170)
T 1szb_A 113 TGFEAF----YAAEDI-DECQVAPGEAPTCD--HHCHN---HLGGFYCSCRAGYVLHRNKRTCSE 167 (170)
T ss_dssp CEEEEE----EEEEEC-CTTCCCTTSCCSSS--SEEEE---ETTEEEEECCTTEEECTTSSCEEE
T ss_pred cCceee----eecccc-CcccCCCCCCCccC--Ccccc---CCCCEEEeCCCCcEECCCCCcccc
Confidence 667661 234566 9994432 274 48999 999999999999997765555654
No 118
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=93.99 E-value=0.025 Score=55.25 Aligned_cols=37 Identities=22% Similarity=0.582 Sum_probs=33.4
Q ss_pred cCCCCCCCCCCCCEEee-CCCCcEeeCC-CCCcCCCCCCCcccc
Q psy9427 77 IPACDSGACGTNAVCIP-EDHRPVCHCP-VGTHPSPSPDVHCAR 118 (324)
Q Consensus 77 i~~C~~~~C~~~~~C~~-~~~~~~C~C~-~G~~g~~~~~~~C~~ 118 (324)
+|+|.++||.++++|++ ..++|.|.|+ +||+| ..|+.
T Consensus 2 ~d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G-----~~Ce~ 40 (553)
T 1q4g_A 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSG-----PNCTI 40 (553)
T ss_dssp CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEET-----TTTCE
T ss_pred CCcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCC-----CCCCC
Confidence 57888899999999999 8999999999 99999 77764
No 119
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=93.64 E-value=0.1 Score=40.21 Aligned_cols=26 Identities=31% Similarity=0.746 Sum_probs=22.0
Q ss_pred CCCCCCEeeeCC--Cce-eeeeCCCeeecC
Q psy9427 21 SCGVNAVCVVNN--HEA-RCFCPPGSYVGD 47 (324)
Q Consensus 21 ~C~~~~~C~~~~--~~~-~C~C~~G~y~g~ 47 (324)
||.++++|++.. .+| +|.|++| |+|.
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g-~~G~ 30 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKK-FGGQ 30 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTT-EEST
T ss_pred CCCCcCCcCCCcccCCCCCccCCCC-CCCc
Confidence 799999998873 455 9999999 9985
No 120
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=93.46 E-value=0.039 Score=54.06 Aligned_cols=37 Identities=22% Similarity=0.552 Sum_probs=32.1
Q ss_pred cCCCCCCCCCCCCEEee-CCCCcEeeCC-CCCcCCCCCCCcccc
Q psy9427 77 IPACDSGACGTNAVCIP-EDHRPVCHCP-VGTHPSPSPDVHCAR 118 (324)
Q Consensus 77 i~~C~~~~C~~~~~C~~-~~~~~~C~C~-~G~~g~~~~~~~C~~ 118 (324)
+++|.++||.++++|++ ..++|.|.|+ +||+| ..|+.
T Consensus 1 vd~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G-----~~Ce~ 39 (587)
T 3nt1_A 1 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYG-----ENCTT 39 (587)
T ss_dssp CCTTTTCCCCTTCEEEEEETTEEEEECTTSSEET-----TTTCE
T ss_pred CCCCCCCCCCCCCEeeCCCCCCeEEecCCCCccC-----CCCCC
Confidence 57898999999999995 5589999999 99999 67764
No 121
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=92.36 E-value=0.065 Score=43.20 Aligned_cols=26 Identities=19% Similarity=0.565 Sum_probs=23.6
Q ss_pred CCCCCCeeeeCCCCceeeCCCCCccC
Q psy9427 193 ACGPNALCRAVGKRPVCACPDGFSAV 218 (324)
Q Consensus 193 ~C~~~~~C~~~~g~y~C~C~~Gy~g~ 218 (324)
+|..+++|++..++|+|.|++||.|.
T Consensus 126 ~C~~~g~C~~~~~~~~c~C~~g~~g~ 151 (164)
T 3cfw_A 126 SCSGHGECVEIINNYTCNCDVGYYGP 151 (164)
T ss_dssp SSCSSEEEEEETTEEEEEECTTCBSS
T ss_pred cCCCCCeecccCCCceeeeCCCcccc
Confidence 67788999999999999999999973
No 122
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=91.17 E-value=0.13 Score=41.86 Aligned_cols=40 Identities=20% Similarity=0.470 Sum_probs=30.0
Q ss_pred cCCCCCCC-----CCCCCEEeeCCCCcEeeCCCCCcCCCCCCCccccc
Q psy9427 77 IPACDSGA-----CGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARE 119 (324)
Q Consensus 77 i~~C~~~~-----C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~ 119 (324)
+++|...+ |.. .|+++.++|.|.|++||++.+.. ..|+++
T Consensus 124 i~eC~~~~~~~~~C~~--~C~n~~g~~~C~C~~Gy~l~~d~-~~C~~~ 168 (170)
T 1szb_A 124 IDECQVAPGEAPTCDH--HCHNHLGGFYCSCRAGYVLHRNK-RTCSEQ 168 (170)
T ss_dssp CCTTCCCTTSCCSSSS--EEEEETTEEEEECCTTEEECTTS-SCEEEC
T ss_pred cCcccCCCCCCCccCC--ccccCCCCEEEeCCCCcEECCCC-Cccccc
Confidence 57776433 653 89999999999999999965543 677654
No 123
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=90.96 E-value=0.13 Score=41.20 Aligned_cols=43 Identities=28% Similarity=0.515 Sum_probs=31.1
Q ss_pred cccccCCCCCCC--CCCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCCCC
Q psy9427 115 HCARESNLCRDS--NPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCV 163 (324)
Q Consensus 115 ~C~~~~~~C~~~--~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~ 163 (324)
.+.++ ++|... .+| ...|.+ +.++|+|+|++||++......|+
T Consensus 113 ~~~d~-~eC~~~~~~~C--~~~C~n---~~g~~~C~C~~Gy~l~~~~~~C~ 157 (159)
T 1nzi_A 113 VATDI-NECTDFVDVPC--SHFCNN---FIGGYFCSCPPEYFLHDDMKNCG 157 (159)
T ss_dssp EEEEC-CTTTC-CCCCS--SSEEEE---ETTEEEEECCTTCEECTTSSCEE
T ss_pred ecccC-cccCCCCCCCC--CCcccC---cCCCEEEecCCCcEECCCCCccc
Confidence 34556 899543 256 468999 99999999999999766444454
No 124
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=90.76 E-value=0.069 Score=42.60 Aligned_cols=37 Identities=22% Similarity=0.656 Sum_probs=32.7
Q ss_pred cCCCCCCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccc
Q psy9427 77 IPACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCAR 118 (324)
Q Consensus 77 i~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~ 118 (324)
+++|...||.+++.|.+...+|.|.|.+||+| ..|+.
T Consensus 119 ~~~~~~~pc~~~g~C~~~~~~~~c~C~~g~~g-----~~Ce~ 155 (157)
T 1g1t_A 119 TAACTNTSCSGHGECVETINNYTCKCDPGFSG-----LKCEQ 155 (157)
T ss_dssp ECCCCTTGGGGSEEEEEETTEEEEEECTTEES-----TTSCE
T ss_pred cCCCCCCCCCCCCEeecCCCCeeEECCCCccC-----ccccc
Confidence 67787788988899999999999999999999 67764
No 125
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=89.10 E-value=0.75 Score=33.24 Aligned_cols=69 Identities=25% Similarity=0.550 Sum_probs=50.8
Q ss_pred CCCCCCCCCCEEeeC-CCCcEeeCCCCCcCCCCCCCccccc-CCCCCCCC-CCCCCCeeecCCCCC-CCeeeeCCCCCc
Q psy9427 80 CDSGACGTNAVCIPE-DHRPVCHCPVGTHPSPSPDVHCARE-SNLCRDSN-PCHPTARCEDTGATN-GKVVCSCPELSV 154 (324)
Q Consensus 80 C~~~~C~~~~~C~~~-~~~~~C~C~~G~~g~~~~~~~C~~~-~~~C~~~~-~C~~~~~C~~~~~~~-g~~~C~C~~G~~ 154 (324)
|....|..+|.|... .+.-.|+|..+|.-+. ..|... .-.|+..+ -|..+|.|.. .. ...+|+|...+.
T Consensus 7 C~~tkcp~NA~Cyr~~dg~EecRCllnykk~~---~kCV~~~~~~C~~NNGGCd~nA~C~~---~~~~kIvC~C~~~~~ 79 (95)
T 1b9w_A 7 CIDTNVPENAACYRYLDGTEEWRCLLYFKEDA---GKCVPAPNMTCKDKNGGCAPEAECKM---NDKNEIVCKCTKEGS 79 (95)
T ss_dssp CSSCCCCTTEEEEECTTSCEEEEECTTEEEET---TEEEECTTCCTTTGGGGSCTTSEEEE---CTTSCEEEECCSTTE
T ss_pred cccCCCCCCcCeEEEcCCCEEEEEECCeEecC---CEEEcCCCCCccccCCCcCCCcceee---cCCCcEEEECCCCCC
Confidence 333467889999985 5788999999998754 678765 12563322 5999999997 55 678999988764
No 126
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=88.59 E-value=0.32 Score=34.28 Aligned_cols=34 Identities=26% Similarity=0.599 Sum_probs=24.5
Q ss_pred cccCCC---CCCCCCCCEeee--CCCceeeeeCCCeeecCC
Q psy9427 13 CWNSCD---GVSCGVNAVCVV--NNHEARCFCPPGSYVGDP 48 (324)
Q Consensus 13 c~~~C~---~~~C~~~~~C~~--~~~~~~C~C~~G~y~g~~ 48 (324)
-.++|. .+.|.++ +|+. ..+.+.|.|++| |+|..
T Consensus 36 ~~~pC~~~~~~yClnG-~C~~i~~~~~~~C~C~~G-YtG~R 74 (79)
T 1xdt_R 36 KRDPCLRKYKDFCIHG-ECKYVKELRAPSCICHPG-YHGER 74 (79)
T ss_dssp ---CTTTTTTTCCSSE-EECCBGGGTBCCEEECTT-EESTT
T ss_pred cCCCCCccccCcCCCC-EeeeecCCCCeEEEcCCC-ccccc
Confidence 356787 5789886 9953 346789999999 99953
No 127
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=88.32 E-value=0.16 Score=46.22 Aligned_cols=41 Identities=24% Similarity=0.600 Sum_probs=24.5
Q ss_pred CCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCCCCCCC
Q psy9427 121 NLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQG 166 (324)
Q Consensus 121 ~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~~~~ 166 (324)
|||+....| ...|+| ++|+|+|.|++||........|...+
T Consensus 2 ~ec~~~~~C--~~~C~n---~~g~~~C~C~~g~~l~~d~~~C~~~~ 42 (349)
T 3v64_C 2 NECAEEGYC--SQGCTN---SEGAFQCWCEAGYELRPDRRSCKALG 42 (349)
T ss_dssp -------CC--SSEECC---C---CCEECCTTEEECTTSSCEEESS
T ss_pred cccCCCCCC--cCeeec---CCCCeEEECCCCccCCCCCCcccccc
Confidence 778423356 569999 99999999999999876566676443
No 128
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=88.00 E-value=0.37 Score=30.82 Aligned_cols=24 Identities=29% Similarity=0.854 Sum_probs=19.5
Q ss_pred CCCCCCeeeeC--CCCceeeCCCCCcc
Q psy9427 193 ACGPNALCRAV--GKRPVCACPDGFSA 217 (324)
Q Consensus 193 ~C~~~~~C~~~--~g~y~C~C~~Gy~g 217 (324)
.|.++ +|... .+.+.|.|+.||+|
T Consensus 15 yC~nG-~C~~~~~~~~~~C~C~~gy~G 40 (50)
T 3e50_C 15 FCFHG-TCRFLVQEDKPACVCHSGYVG 40 (50)
T ss_pred cccCC-EEeeccCCCCeEEECCCCCcc
Confidence 57776 99853 46799999999998
No 129
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=87.60 E-value=0.51 Score=43.92 Aligned_cols=32 Identities=25% Similarity=0.626 Sum_probs=29.3
Q ss_pred cCCCCCCCCCCCEeeeCCCceeeeeCC-CeeecC
Q psy9427 15 NSCDGVSCGVNAVCVVNNHEARCFCPP-GSYVGD 47 (324)
Q Consensus 15 ~~C~~~~C~~~~~C~~~~~~~~C~C~~-G~y~g~ 47 (324)
++|..+||.++++|+....+|+|.|+. | |.|.
T Consensus 186 ~~C~~~pC~n~g~C~~~~~~~~C~C~~~~-~~G~ 218 (410)
T 3asi_A 186 TTCQEDSCSNQGVCLQQWDGFSCDCSMTS-FSGP 218 (410)
T ss_dssp SCCCTTSSSTTCEEEECSSSEEEECTTTS-EEST
T ss_pred CCcccccCCCCCEecCCCCCceEeccCCc-ccCC
Confidence 579999999999999999999999996 9 8885
No 130
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=87.08 E-value=0.5 Score=30.22 Aligned_cols=31 Identities=23% Similarity=0.607 Sum_probs=24.2
Q ss_pred CCCCCCCEEee--CCCCcEeeCCCCCcCCCCCCCccccc
Q psy9427 83 GACGTNAVCIP--EDHRPVCHCPVGTHPSPSPDVHCARE 119 (324)
Q Consensus 83 ~~C~~~~~C~~--~~~~~~C~C~~G~~g~~~~~~~C~~~ 119 (324)
+.|.++ +|.. ..+.+.|.|++||+| ..|+..
T Consensus 14 ~yC~nG-~C~~~~~~~~~~C~C~~gy~G-----~RCe~~ 46 (50)
T 3e50_C 14 QFCFHG-TCRFLVQEDKPACVCHSGYVG-----ARCEHA 46 (50)
T ss_pred CcccCC-EEeeccCCCCeEEECCCCCcc-----cCCCce
Confidence 567765 9985 346799999999999 777654
No 131
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=86.71 E-value=0.4 Score=39.60 Aligned_cols=26 Identities=38% Similarity=1.154 Sum_probs=21.1
Q ss_pred CCccCCCCCCeeeeCCCCceeeCCCCCcc
Q psy9427 189 VCQGACGPNALCRAVGKRPVCACPDGFSA 217 (324)
Q Consensus 189 ~C~~~C~~~~~C~~~~g~y~C~C~~Gy~g 217 (324)
.|...|.++|.|+... +|.|++||.|
T Consensus 150 ~C~~~C~ngG~Cv~P~---~C~C~~Gw~G 175 (188)
T 2ygo_A 150 ECPGGCRNGGFCNERR---ICECPDGFHG 175 (188)
T ss_dssp CCTTCCCTTCEECTTS---CEECCTTCBT
T ss_pred ccCCCCCCCCEeCCCC---cccCcCCCCC
Confidence 3445789999998644 7999999998
No 132
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=86.62 E-value=0.28 Score=34.61 Aligned_cols=36 Identities=28% Similarity=0.516 Sum_probs=24.9
Q ss_pred cCCCC---CCCCCCCCEEee--CCCCcEeeCCCCCcCCCCCCCcccc
Q psy9427 77 IPACD---SGACGTNAVCIP--EDHRPVCHCPVGTHPSPSPDVHCAR 118 (324)
Q Consensus 77 i~~C~---~~~C~~~~~C~~--~~~~~~C~C~~G~~g~~~~~~~C~~ 118 (324)
.++|. .+.|.++ +|+. ..+.+.|.|.+||+| ..|+.
T Consensus 37 ~~pC~~~~~~yClnG-~C~~i~~~~~~~C~C~~GYtG-----~RCE~ 77 (79)
T 1xdt_R 37 RDPCLRKYKDFCIHG-ECKYVKELRAPSCICHPGYHG-----ERCHG 77 (79)
T ss_dssp --CTTTTTTTCCSSE-EECCBGGGTBCCEEECTTEES-----TTCCE
T ss_pred CCCCCccccCcCCCC-EeeeecCCCCeEEEcCCCccc-----ccccc
Confidence 34554 4678775 8953 346789999999999 67754
No 133
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=86.09 E-value=0.56 Score=29.97 Aligned_cols=24 Identities=17% Similarity=0.462 Sum_probs=19.1
Q ss_pred CCCCCCeee--eCCCCceeeCCCCCcc
Q psy9427 193 ACGPNALCR--AVGKRPVCACPDGFSA 217 (324)
Q Consensus 193 ~C~~~~~C~--~~~g~y~C~C~~Gy~g 217 (324)
.|.+ ++|+ ...+.+.|.|+.||+|
T Consensus 19 yC~n-G~C~~i~~~~~~~C~C~~gy~G 44 (50)
T 2rnl_A 19 FCIH-GECKYIEHLEAVTCKCQQEYFG 44 (50)
T ss_dssp TCSS-SEEEEETTTTEEEEECCSSCCS
T ss_pred cCCC-CEEEEecCCCCeeEECCCCccc
Confidence 5766 5997 4456789999999997
No 134
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=85.72 E-value=0.68 Score=29.56 Aligned_cols=29 Identities=17% Similarity=0.402 Sum_probs=22.3
Q ss_pred CCCCCCCEEe--eCCCCcEeeCCCCCcCCCCCCCccc
Q psy9427 83 GACGTNAVCI--PEDHRPVCHCPVGTHPSPSPDVHCA 117 (324)
Q Consensus 83 ~~C~~~~~C~--~~~~~~~C~C~~G~~g~~~~~~~C~ 117 (324)
+.|.+ ++|+ ...+.+.|.|++||+| ..|+
T Consensus 18 ~yC~n-G~C~~i~~~~~~~C~C~~gy~G-----~RCe 48 (50)
T 2rnl_A 18 NFCIH-GECKYIEHLEAVTCKCQQEYFG-----ERCG 48 (50)
T ss_dssp GTCSS-SEEEEETTTTEEEEECCSSCCS-----SSCC
T ss_pred CcCCC-CEEEEecCCCCeeEECCCCccc-----cccc
Confidence 56765 5997 4456789999999999 6664
No 135
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=85.66 E-value=0.58 Score=29.88 Aligned_cols=31 Identities=23% Similarity=0.449 Sum_probs=23.0
Q ss_pred CCCCCCCeeecCCCCCCCeeeeCCCCCccCCCC
Q psy9427 127 NPCHPTARCEDTGATNGKVVCSCPELSVGDPYK 159 (324)
Q Consensus 127 ~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~ 159 (324)
+.|.+ ++|..+. ..+.+.|+|++||+|+.++
T Consensus 14 ~yC~n-G~C~~~~-~~~~~~C~C~~gy~G~RCe 44 (50)
T 1iox_A 14 HYCIK-GRCRFVV-AEQTPSCVCDEGYIGARCE 44 (50)
T ss_dssp TSCTT-CCEEEET-TTTEEEECCCTTEETTTTC
T ss_pred CcccC-CEEEeEc-CCCCeEEECCCCcccCCCC
Confidence 56776 7896210 5677999999999999843
No 136
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=85.27 E-value=0.38 Score=43.65 Aligned_cols=40 Identities=23% Similarity=0.576 Sum_probs=23.3
Q ss_pred cCCCC-CCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCccccc
Q psy9427 77 IPACD-SGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARE 119 (324)
Q Consensus 77 i~~C~-~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~ 119 (324)
||||. .+.|. ..|+++.++|.|.|++||.+.+.. +.|...
T Consensus 1 i~ec~~~~~C~--~~C~n~~g~~~C~C~~g~~l~~d~-~~C~~~ 41 (349)
T 3v64_C 1 VNECAEEGYCS--QGCTNSEGAFQCWCEAGYELRPDR-RSCKAL 41 (349)
T ss_dssp --------CCS--SEECCC---CCEECCTTEEECTTS-SCEEES
T ss_pred CcccCCCCCCc--CeeecCCCCeEEECCCCccCCCCC-Cccccc
Confidence 45665 24464 589999999999999999976543 677654
No 137
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=85.17 E-value=0.71 Score=36.68 Aligned_cols=20 Identities=20% Similarity=0.575 Sum_probs=18.4
Q ss_pred CeeeeCCCCceeeCCCCCcc
Q psy9427 198 ALCRAVGKRPVCACPDGFSA 217 (324)
Q Consensus 198 ~~C~~~~g~y~C~C~~Gy~g 217 (324)
..|.+..++|+|.|++||+.
T Consensus 130 ~~C~n~~g~~~C~C~~Gy~l 149 (159)
T 1nzi_A 130 HFCNNFIGGYFCSCPPEYFL 149 (159)
T ss_dssp SEEEEETTEEEEECCTTCEE
T ss_pred CcccCcCCCEEEecCCCcEE
Confidence 47999999999999999986
No 138
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=84.91 E-value=0.48 Score=30.27 Aligned_cols=31 Identities=26% Similarity=0.580 Sum_probs=24.0
Q ss_pred CCCCCCCEEe--eCCCCcEeeCCCCCcCCCCCCCccccc
Q psy9427 83 GACGTNAVCI--PEDHRPVCHCPVGTHPSPSPDVHCARE 119 (324)
Q Consensus 83 ~~C~~~~~C~--~~~~~~~C~C~~G~~g~~~~~~~C~~~ 119 (324)
+.|.+ ++|+ ...+.+.|+|++||+| ..|+..
T Consensus 14 ~yC~n-G~C~~~~~~~~~~C~C~~gy~G-----~RCe~~ 46 (50)
T 1iox_A 14 HYCIK-GRCRFVVAEQTPSCVCDEGYIG-----ARCERV 46 (50)
T ss_dssp TSCTT-CCEEEETTTTEEEECCCTTEET-----TTTCEE
T ss_pred CcccC-CEEEeEcCCCCeEEECCCCccc-----CCCCee
Confidence 56776 6886 4456789999999999 788754
No 139
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=84.90 E-value=0.64 Score=43.22 Aligned_cols=37 Identities=19% Similarity=0.576 Sum_probs=32.5
Q ss_pred cCCCCCCCCCCCCEEeeCCCCcEeeCCC-CCcCCCCCCCcccc
Q psy9427 77 IPACDSGACGTNAVCIPEDHRPVCHCPV-GTHPSPSPDVHCAR 118 (324)
Q Consensus 77 i~~C~~~~C~~~~~C~~~~~~~~C~C~~-G~~g~~~~~~~C~~ 118 (324)
.++|...||.++++|+....+|.|.|+. ||.| ..|+.
T Consensus 185 ~~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G-----~~C~~ 222 (410)
T 3asi_A 185 STTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSG-----PLCND 222 (410)
T ss_dssp SSCCCTTSSSTTCEEEECSSSEEEECTTTSEES-----TTSCE
T ss_pred CCCcccccCCCCCEecCCCCCceEeccCCcccC-----CCCCC
Confidence 4688889999999999999999999996 9998 67764
No 140
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=84.37 E-value=1.2 Score=35.27 Aligned_cols=31 Identities=23% Similarity=0.588 Sum_probs=25.1
Q ss_pred CCCCCCEEeeC--CCCc-EeeCCCCCcCCCCCCCccccc
Q psy9427 84 ACGTNAVCIPE--DHRP-VCHCPVGTHPSPSPDVHCARE 119 (324)
Q Consensus 84 ~C~~~~~C~~~--~~~~-~C~C~~G~~g~~~~~~~C~~~ 119 (324)
||.++++|+.. ...+ .|.|++||.| ..|+..
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G-----~~Cei~ 47 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFGG-----QHCEID 47 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEES-----TTSCEE
T ss_pred CCCCCCCcCCCccccCCccccCCCCCCC-----Cceecc
Confidence 79999999865 2455 8999999999 788654
No 141
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=83.85 E-value=0.72 Score=40.56 Aligned_cols=43 Identities=21% Similarity=0.668 Sum_probs=32.2
Q ss_pred cCCCCCC---CCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccccCCCC
Q psy9427 77 IPACDSG---ACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCARESNLC 123 (324)
Q Consensus 77 i~~C~~~---~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~~~~~C 123 (324)
+|||... .| ...|.++.++|.|.|.+||.+.... +.|... ++|
T Consensus 2 ~~eC~~~~~~~C--~~~C~~~~~~~~C~C~~G~~l~~d~-~sC~p~-~~c 47 (283)
T 3f1s_B 2 KNECHPERTDGC--QHFCLPGQESYTCSCAQGYRLGEDH-KQCVPH-DQC 47 (283)
T ss_dssp -CCCCSSCSSSC--SSBCCCCTTSCCCBCCTTEEECTTS-SCEEEC-STT
T ss_pred CCccCCCCCCCC--CCEeeCCCCCeEecCCCCcccCCCC-Cccccc-ccc
Confidence 4666533 45 3689999999999999999876544 788877 666
No 142
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=82.92 E-value=0.35 Score=38.32 Aligned_cols=25 Identities=28% Similarity=0.678 Sum_probs=23.2
Q ss_pred CCCCCCeeeeCCCCceeeCCCCCcc
Q psy9427 193 ACGPNALCRAVGKRPVCACPDGFSA 217 (324)
Q Consensus 193 ~C~~~~~C~~~~g~y~C~C~~Gy~g 217 (324)
+|.+++.|.+..+.|.|.|.+||+|
T Consensus 126 pc~~~g~C~~~~~~~~c~C~~g~~g 150 (157)
T 1g1t_A 126 SCSGHGECVETINNYTCKCDPGFSG 150 (157)
T ss_dssp GGGGSEEEEEETTEEEEEECTTEES
T ss_pred CCCCCCEeecCCCCeeEECCCCccC
Confidence 6778899999999999999999997
No 143
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=82.69 E-value=0.58 Score=41.15 Aligned_cols=44 Identities=27% Similarity=0.575 Sum_probs=34.9
Q ss_pred CCCCCC--CCCCCCCeeecCCCCCCCeeeeCCCCCccCCCCCCCCCCCCCC
Q psy9427 121 NLCRDS--NPCHPTARCEDTGATNGKVVCSCPELSVGDPYKTGCVPQGQCP 169 (324)
Q Consensus 121 ~~C~~~--~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~~~~eC~ 169 (324)
|||... ..| ...|.+ +.++|+|.|..||........|.+.++|.
T Consensus 3 ~eC~~~~~~~C--~~~C~~---~~~~~~C~C~~G~~l~~d~~sC~p~~~c~ 48 (283)
T 3f1s_B 3 NECHPERTDGC--QHFCLP---GQESYTCSCAQGYRLGEDHKQCVPHDQCA 48 (283)
T ss_dssp CCCCSSCSSSC--SSBCCC---CTTSCCCBCCTTEEECTTSSCEEECSTTC
T ss_pred CccCCCCCCCC--CCEeeC---CCCCeEecCCCCcccCCCCCccccccccc
Confidence 788444 256 578999 99999999999999877667898877763
No 144
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=82.32 E-value=4.6 Score=29.11 Aligned_cols=70 Identities=24% Similarity=0.480 Sum_probs=49.1
Q ss_pred CCCCCCCCCCCEeee-CCCceeeeeCCCeeecCCCCCCcccCCCCCCcCCCCCceeCCCCcccCCCCC--CCCCCCCEEe
Q psy9427 16 SCDGVSCGVNAVCVV-NNHEARCFCPPGSYVGDPNIECRQVPCVHNHDCSTSHACDLLSHTCIPACDS--GACGTNAVCI 92 (324)
Q Consensus 16 ~C~~~~C~~~~~C~~-~~~~~~C~C~~G~y~g~~~~~C~~~~C~~~~~C~~~~~C~c~~~~Ci~~C~~--~~C~~~~~C~ 92 (324)
.|....|..||.|+. ..+.-.|.|..| |.-+ ...|...+ ...|.. +-|..+|.|.
T Consensus 6 ~C~~tkcp~NA~Cyr~~dg~EecRClln-ykk~-~~kCV~~~--------------------~~~C~~NNGGCd~nA~C~ 63 (95)
T 1b9w_A 6 RCIDTNVPENAACYRYLDGTEEWRCLLY-FKED-AGKCVPAP--------------------NMTCKDKNGGCAPEAECK 63 (95)
T ss_dssp SCSSCCCCTTEEEEECTTSCEEEEECTT-EEEE-TTEEEECT--------------------TCCTTTGGGGSCTTSEEE
T ss_pred ccccCCCCCCcCeEEEcCCCEEEEEECC-eEec-CCEEEcCC--------------------CCCccccCCCcCCCccee
Confidence 355557899999997 468889999999 7753 22344310 113332 4577889999
Q ss_pred eCC-CCcEeeCCCCCc
Q psy9427 93 PED-HRPVCHCPVGTH 107 (324)
Q Consensus 93 ~~~-~~~~C~C~~G~~ 107 (324)
... ..-.|.|...+.
T Consensus 64 ~~~~~kIvC~C~~~~~ 79 (95)
T 1b9w_A 64 MNDKNEIVCKCTKEGS 79 (95)
T ss_dssp ECTTSCEEEECCSTTE
T ss_pred ecCCCcEEEECCCCCC
Confidence 877 788999988764
No 145
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=76.27 E-value=2.4 Score=33.51 Aligned_cols=26 Identities=31% Similarity=0.696 Sum_probs=21.7
Q ss_pred CCCCCCEeeeC--CCce-eeeeCCCeeecC
Q psy9427 21 SCGVNAVCVVN--NHEA-RCFCPPGSYVGD 47 (324)
Q Consensus 21 ~C~~~~~C~~~--~~~~-~C~C~~G~y~g~ 47 (324)
||.++++|+.. ...| .|.|++| |.|.
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g-~~G~ 42 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKK-FGGQ 42 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTT-EEST
T ss_pred CCCCCCCcCCCccccCCccccCCCC-CCCC
Confidence 89999999865 3455 8999999 9985
No 146
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=73.14 E-value=2.3 Score=45.44 Aligned_cols=32 Identities=25% Similarity=0.652 Sum_probs=29.2
Q ss_pred cCCCCCCCCCCCEeeeCCCceeeeeC-CCeeecC
Q psy9427 15 NSCDGVSCGVNAVCVVNNHEARCFCP-PGSYVGD 47 (324)
Q Consensus 15 ~~C~~~~C~~~~~C~~~~~~~~C~C~-~G~y~g~ 47 (324)
++|..+||.++++|+....+|+|.|+ +| |+|.
T Consensus 1018 ~~C~~~pC~ngG~C~~~~~~~~C~C~~~g-~~G~ 1050 (1245)
T 3qcw_A 1018 TTCQEDSCSNQGVCLQQWDGFSCDCSMTS-FSGP 1050 (1245)
T ss_dssp CCCCTTSSSSSCEEEEETTEEEEECTTSS-CBST
T ss_pred CceECCcCCCCCEeCCCCCCCEEECCCCC-CCCC
Confidence 57999999999999999999999999 69 9985
No 147
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=70.84 E-value=2.6 Score=45.11 Aligned_cols=38 Identities=18% Similarity=0.543 Sum_probs=32.9
Q ss_pred cCCCCCCCCCCCCEEeeCCCCcEeeCC-CCCcCCCCCCCccccc
Q psy9427 77 IPACDSGACGTNAVCIPEDHRPVCHCP-VGTHPSPSPDVHCARE 119 (324)
Q Consensus 77 i~~C~~~~C~~~~~C~~~~~~~~C~C~-~G~~g~~~~~~~C~~~ 119 (324)
.+.|...||.++++|+....+|.|.|+ +||+| ..|+..
T Consensus 1017 ~~~C~~~pC~ngG~C~~~~~~~~C~C~~~g~~G-----~~C~~~ 1055 (1245)
T 3qcw_A 1017 STTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSG-----PLCNDP 1055 (1245)
T ss_dssp CCCCCTTSSSSSCEEEEETTEEEEECTTSSCBS-----TTSCBC
T ss_pred cCceECCcCCCCCEeCCCCCCCEEECCCCCCCC-----CCccCC
Confidence 467888999999999999999999999 69999 777653
No 148
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=66.40 E-value=4.1 Score=33.52 Aligned_cols=32 Identities=38% Similarity=1.008 Sum_probs=24.7
Q ss_pred CCCCCCCCCCCCEEeeCCCCcEeeCCCCCcCCCCCCCcccc
Q psy9427 78 PACDSGACGTNAVCIPEDHRPVCHCPVGTHPSPSPDVHCAR 118 (324)
Q Consensus 78 ~~C~~~~C~~~~~C~~~~~~~~C~C~~G~~g~~~~~~~C~~ 118 (324)
..|. .+|.+++.|+. ...|.|++||+| ..|+.
T Consensus 149 ~~C~-~~C~ngG~Cv~---P~~C~C~~Gw~G-----~~C~~ 180 (188)
T 2ygo_A 149 AECP-GGCRNGGFCNE---RRICECPDGFHG-----PHCEG 180 (188)
T ss_dssp CCCT-TCCCTTCEECT---TSCEECCTTCBT-----TTTCB
T ss_pred CccC-CCCCCCCEeCC---CCcccCcCCCCC-----CCCcC
Confidence 3454 68999999985 347999999999 66654
No 149
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=63.74 E-value=4.8 Score=38.65 Aligned_cols=29 Identities=28% Similarity=0.721 Sum_probs=25.0
Q ss_pred CCCCCCCEeeeC-CCceeeeeCCCeeecCCC
Q psy9427 20 VSCGVNAVCVVN-NHEARCFCPPGSYVGDPN 49 (324)
Q Consensus 20 ~~C~~~~~C~~~-~~~~~C~C~~G~y~g~~~ 49 (324)
+||..||.|+.. .+.|.|.|+.| |.|+..
T Consensus 27 ~~c~~~a~C~~~~~~~~~c~C~~G-~ag~G~ 56 (551)
T 3fby_A 27 SECHEHADCVLERDGSRSCVCAVG-WAGNGI 56 (551)
T ss_dssp CCCCTTEEEEECTTSCEEEEECTT-EESSSS
T ss_pred CCCCCCCeeEeCCCCCEecCCCCC-CCCCCc
Confidence 689999999975 67889999999 998644
No 150
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=59.87 E-value=5.2 Score=38.41 Aligned_cols=31 Identities=26% Similarity=0.539 Sum_probs=26.3
Q ss_pred CCCCCCCCeeecCCCCCCCeeeeCCCCCccCCC
Q psy9427 126 SNPCHPTARCEDTGATNGKVVCSCPELSVGDPY 158 (324)
Q Consensus 126 ~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~ 158 (324)
.++|+.++.|+.. ..+.|+|+|+.||.|.+.
T Consensus 26 ~~~c~~~a~C~~~--~~~~~~c~C~~G~ag~G~ 56 (551)
T 3fby_A 26 PSECHEHADCVLE--RDGSRSCVCAVGWAGNGI 56 (551)
T ss_dssp BCCCCTTEEEEEC--TTSCEEEEECTTEESSSS
T ss_pred CCCCCCCCeeEeC--CCCCEecCCCCCCCCCCc
Confidence 3689999999983 567899999999999874
No 151
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=55.92 E-value=9.7 Score=33.75 Aligned_cols=32 Identities=16% Similarity=0.171 Sum_probs=24.3
Q ss_pred CCeeecCCCCCC--CeeeeCCCCCccCCCCCCCCCCC
Q psy9427 132 TARCEDTGATNG--KVVCSCPELSVGDPYKTGCVPQG 166 (324)
Q Consensus 132 ~~~C~~~~~~~g--~~~C~C~~G~~g~~~~~~C~~~~ 166 (324)
...|.. .++ +|+|.|+.||......+.|.+.+
T Consensus 278 s~~C~~---~~~~~~~~C~C~~g~~l~~d~~~c~~~~ 311 (318)
T 3sov_A 278 SHLCLM---SPVKPFYQCACPTGVKLLENGKTCKDGN 311 (318)
T ss_dssp SSEEEE---CSSTTSEEEECSTTCCBCTTSSCBCC--
T ss_pred ceEEec---CCCCCCeEEECCCCCEECCCCCCCCCCC
Confidence 468887 665 69999999999877667787764
No 152
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=54.78 E-value=10 Score=33.64 Aligned_cols=29 Identities=21% Similarity=0.493 Sum_probs=22.3
Q ss_pred CEEeeCCC--CcEeeCCCCCcCCCCCCCcccc
Q psy9427 89 AVCIPEDH--RPVCHCPVGTHPSPSPDVHCAR 118 (324)
Q Consensus 89 ~~C~~~~~--~~~C~C~~G~~g~~~~~~~C~~ 118 (324)
..|+..++ +|.|.|+.||++.... +.|.+
T Consensus 279 ~~C~~~~~~~~~~C~C~~g~~l~~d~-~~c~~ 309 (318)
T 3sov_A 279 HLCLMSPVKPFYQCACPTGVKLLENG-KTCKD 309 (318)
T ss_dssp SEEEECSSTTSEEEECSTTCCBCTTS-SCBCC
T ss_pred eEEecCCCCCCeEEECCCCCEECCCC-CCCCC
Confidence 57987765 7999999999986544 66654
No 153
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=53.39 E-value=9.7 Score=33.48 Aligned_cols=38 Identities=24% Similarity=0.669 Sum_probs=25.8
Q ss_pred cCCCCCC-----CCCCCCEEeeCC------CCcEeeCCCCCcCCCCCCCccc
Q psy9427 77 IPACDSG-----ACGTNAVCIPED------HRPVCHCPVGTHPSPSPDVHCA 117 (324)
Q Consensus 77 i~~C~~~-----~C~~~~~C~~~~------~~~~C~C~~G~~g~~~~~~~C~ 117 (324)
.++|... .|. ..|++.+ ++|.|.|+.||++.+.. ++|.
T Consensus 267 ~n~C~~~~~~ng~Cs--~~C~~~p~~~~~~~~~~C~C~~g~~l~~d~-~~C~ 315 (316)
T 1ijq_A 267 VNWCERTTLSNGGCQ--YLCLPAPQINPHSPKFTCACPDGMLLARDM-RSCL 315 (316)
T ss_dssp CCTTSSSSSGGGGCS--SEEEECCCCSTTCCSEEEECCTTCEECTTS-SCEE
T ss_pred cccccccccCCCCcC--cccCCCccccCCCCCeEeeCCCCCEECCCC-CccC
Confidence 4566533 353 5898764 58999999999975543 5553
No 154
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=48.46 E-value=12 Score=32.90 Aligned_cols=28 Identities=21% Similarity=0.445 Sum_probs=21.6
Q ss_pred CCeeecCCCCC------CCeeeeCCCCCccCCCCCCC
Q psy9427 132 TARCEDTGATN------GKVVCSCPELSVGDPYKTGC 162 (324)
Q Consensus 132 ~~~C~~~~~~~------g~~~C~C~~G~~g~~~~~~C 162 (324)
...|++ ++ ++|+|.|+.||+.....+.|
T Consensus 281 s~~C~~---~p~~~~~~~~~~C~C~~g~~l~~d~~~C 314 (316)
T 1ijq_A 281 QYLCLP---APQINPHSPKFTCACPDGMLLARDMRSC 314 (316)
T ss_dssp SSEEEE---CCCCSTTCCSEEEECCTTCEECTTSSCE
T ss_pred CcccCC---CccccCCCCCeEeeCCCCCEECCCCCcc
Confidence 468987 64 68999999999987655444
No 155
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=48.10 E-value=9.1 Score=37.63 Aligned_cols=39 Identities=23% Similarity=0.572 Sum_probs=28.8
Q ss_pred cCCCCCC--CCCCCCEEeeCC-CCcEeeCCCCCcCCCCCCCcccc
Q psy9427 77 IPACDSG--ACGTNAVCIPED-HRPVCHCPVGTHPSPSPDVHCAR 118 (324)
Q Consensus 77 i~~C~~~--~C~~~~~C~~~~-~~~~C~C~~G~~g~~~~~~~C~~ 118 (324)
+++|... .| ...|++.. ++|.|.|++||.+.+.. +.|..
T Consensus 265 ~n~C~~~ng~C--~~~C~~~~~~~~~C~C~~g~~l~~d~-~~C~~ 306 (628)
T 4a0p_A 265 WNECASSNGHC--SHLCLAVPVGGFVCGCPAHYSLNADN-RTCSA 306 (628)
T ss_dssp CCTTTTTGGGC--SSEEEEETTTEEEEECSTTCEECTTS-SCEEC
T ss_pred ceEeccCCCCc--chhhhcCCCCCeeEEcCCCcEecccC-CcCcc
Confidence 5677643 35 36899888 99999999999876544 66754
No 156
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=46.28 E-value=11 Score=37.16 Aligned_cols=40 Identities=30% Similarity=0.629 Sum_probs=29.8
Q ss_pred CCCCCCC-CCCCCCeeecCCCCC-CCeeeeCCCCCccCCCCCCCCCC
Q psy9427 121 NLCRDSN-PCHPTARCEDTGATN-GKVVCSCPELSVGDPYKTGCVPQ 165 (324)
Q Consensus 121 ~~C~~~~-~C~~~~~C~~~~~~~-g~~~C~C~~G~~g~~~~~~C~~~ 165 (324)
++|+..+ .| ...|++ ++ ++|+|.|+.||.+......|...
T Consensus 266 n~C~~~ng~C--~~~C~~---~~~~~~~C~C~~g~~l~~d~~~C~~~ 307 (628)
T 4a0p_A 266 NECASSNGHC--SHLCLA---VPVGGFVCGCPAHYSLNADNRTCSAP 307 (628)
T ss_dssp CTTTTTGGGC--SSEEEE---ETTTEEEEECSTTCEECTTSSCEECC
T ss_pred eEeccCCCCc--chhhhc---CCCCCeeEEcCCCcEecccCCcCccc
Confidence 7773322 45 578999 88 99999999999987666667654
No 157
>1lr7_A Follistatin, FS1; heparin-binding, cystine-rich, sucrose octasulphate, hormone/growth factor complex; HET: SO4; 1.50A {Rattus norvegicus} SCOP: g.3.11.3 g.68.1.1 PDB: 1lr8_A* 1lr9_A
Probab=44.78 E-value=20 Score=24.32 Aligned_cols=28 Identities=32% Similarity=1.018 Sum_probs=22.6
Q ss_pred ccCCCCCCCCCCCEeee-CCCceeeeeCC
Q psy9427 14 WNSCDGVSCGVNAVCVV-NNHEARCFCPP 41 (324)
Q Consensus 14 ~~~C~~~~C~~~~~C~~-~~~~~~C~C~~ 41 (324)
.++|+..+|+.+.+|+. ..+...|.|+.
T Consensus 1 ~~~C~~~~C~~g~~C~~~~~~~~~C~C~~ 29 (74)
T 1lr7_A 1 METCENVDCGPGKKCRMNKKNKPRCVCAP 29 (74)
T ss_dssp -CCSTTCCCCTTEEEEECTTSCEEEEECC
T ss_pred CCCCCCCcCcCCCEEeECCCCCeeecCCC
Confidence 36899999999999986 46668899865
No 158
>3ngg_A Omwaprin-A; venom protein, racemic protein crystallography, direct metho antibiotic; 1.33A {Oxyuranus microlepidotus}
Probab=41.21 E-value=15 Score=23.13 Aligned_cols=28 Identities=25% Similarity=0.763 Sum_probs=19.7
Q ss_pred CCccccccccCCCCCCCCcccC----Cccccc
Q psy9427 290 AGTCELGCRQNEECSGQMICAG----SKCTGW 317 (324)
Q Consensus 290 ~~~c~~~C~~~~~C~~~~~C~~----~~C~np 317 (324)
.+.|..+|..|.+|+..+.|-. .+|+.|
T Consensus 15 ~~~C~~~C~~D~~C~~~~KCC~~~CG~~C~~P 46 (50)
T 3ngg_A 15 QKPCVKECKNDDSCPGQQKCCNYGCKDECRDP 46 (50)
T ss_dssp SCSCCBCCSSGGGSSTTCEEEECSSCEEEECC
T ss_pred cccchhhCcCccCCCCCCCcccCCcCCccCCc
Confidence 3556778999999988887733 245555
No 159
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=36.54 E-value=8.6 Score=38.31 Aligned_cols=44 Identities=20% Similarity=0.265 Sum_probs=34.7
Q ss_pred eCCCCCcCCCCCCCcccccCCCCCCCCCCCCCCeeecCCCCCCCeeeeCCCCCccCCCC
Q psy9427 101 HCPVGTHPSPSPDVHCARESNLCRDSNPCHPTARCEDTGATNGKVVCSCPELSVGDPYK 159 (324)
Q Consensus 101 ~C~~G~~g~~~~~~~C~~~~~~C~~~~~C~~~~~C~~~~~~~g~~~C~C~~G~~g~~~~ 159 (324)
.|.+||.| ..|... ..| +..|..++.|++ | +|.|.+||+|+.+.
T Consensus 521 ~C~~gw~g-----~dc~i~-~~C--p~~C~ghG~C~~-----G--~C~Cd~G~~G~~C~ 564 (725)
T 2e26_A 521 DKQQTWAI-----DNVYIG-DGC--LDMCSGHGRCVQ-----G--SCVCDEQWGGLYCD 564 (725)
T ss_dssp CTTCCEEE-----EEEEEE-SCS--SGGGGGSEEEET-----T--EEEECTTEESTTSC
T ss_pred ccCCCccc-----cccccc-CCC--CcccCCCcEECC-----C--CEeeCCCccCCCcC
Confidence 68999999 677633 456 347889999987 2 89999999998753
No 160
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=36.42 E-value=14 Score=36.28 Aligned_cols=28 Identities=21% Similarity=0.579 Sum_probs=20.9
Q ss_pred CEEeeCCCCcEeeCCCCCcCCCCCCCccc
Q psy9427 89 AVCIPEDHRPVCHCPVGTHPSPSPDVHCA 117 (324)
Q Consensus 89 ~~C~~~~~~~~C~C~~G~~g~~~~~~~C~ 117 (324)
..|++++++|.|.|+.||...+.. +.|.
T Consensus 590 ~~C~~~~~~~~C~C~~g~~l~~d~-~~C~ 617 (619)
T 3s94_A 590 HLCLYRPQGLRCACPIGFELISDM-KTCI 617 (619)
T ss_dssp SEEEEETTEEEEECCTTCEECSST-TCEE
T ss_pred HhhccCCCCeEEECCCCCEECCCC-CcCC
Confidence 588888888999999999865433 4453
No 161
>2fyj_A Low-density lipoprotein receptor-related protein 1; double module, complement type repeat, calcium, beta-2 hairpin, loop-structures; NMR {Homo sapiens} PDB: 2fyl_B
Probab=35.58 E-value=36 Score=23.65 Aligned_cols=22 Identities=32% Similarity=0.800 Sum_probs=11.9
Q ss_pred CCcCCCCcccC---CCCCCCCCCCC
Q psy9427 243 EEKCIGGRCRV---ACLSHSDCSEG 264 (324)
Q Consensus 243 ~~~C~~~~C~~---~C~~~~~C~~~ 264 (324)
.-+|.+++|++ .|-...+|.++
T Consensus 9 ~f~C~~g~Ci~~~~~CDg~~DC~Dg 33 (82)
T 2fyj_A 9 QFSCASGRCIPISWTCDLDDDCGDR 33 (82)
T ss_dssp EEETTSSCEEETTSSSSCSSSSCST
T ss_pred ceEeCCCCEEeccccCCCcccCCCc
Confidence 33455566654 45555666554
No 162
>2a05_A Cysteine-rich secretory protein-2; alpha helices, 5 disulphide bonds, 2 domains, signaling protein; NMR {Mus musculus}
Probab=35.28 E-value=14 Score=24.06 Aligned_cols=15 Identities=20% Similarity=0.332 Sum_probs=12.5
Q ss_pred CCcccCCcccccchh
Q psy9427 306 QMICAGSKCTGWVEE 320 (324)
Q Consensus 306 ~~~C~~~~C~np~~~ 320 (324)
+.+|.||-|.|||.-
T Consensus 7 P~~CdngLCTNpC~y 21 (57)
T 2a05_A 7 PNNCENGLCTNSCDF 21 (57)
T ss_dssp TTCCSSSSCSCCCSC
T ss_pred chhhcCCccCCCCcC
Confidence 467899999999963
No 163
>3sek_C Follistatin-related protein 3; protein-protein complex, TB domain, cystine knot motif, TGF- fold, disulfide linked dimer, follistatin domain (FSD); HET: NAG; 2.40A {Homo sapiens} PDB: 2kcx_A
Probab=34.27 E-value=24 Score=29.50 Aligned_cols=31 Identities=42% Similarity=1.020 Sum_probs=22.9
Q ss_pred ccccCCCCCCCCCCCEeeeCCCceeeeeCCC
Q psy9427 12 TCWNSCDGVSCGVNAVCVVNNHEARCFCPPG 42 (324)
Q Consensus 12 ~c~~~C~~~~C~~~~~C~~~~~~~~C~C~~G 42 (324)
-|.|+|+...|+.+++|+...+...|.|++.
T Consensus 59 pckd~C~~v~C~~G~~C~~~~~~p~CvC~~~ 89 (209)
T 3sek_C 59 PCKDSCDGVECGPGKACRMLGGRPRCECAPD 89 (209)
T ss_dssp ESCSSSTTCCCCTTEEEEC----CEEEECCC
T ss_pred cCcCcCCCCcCCCCCCCcccCCeeeccCCCc
Confidence 4568899999999999998778889999754
No 164
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=31.85 E-value=17 Score=35.64 Aligned_cols=29 Identities=17% Similarity=0.260 Sum_probs=23.3
Q ss_pred CCeeecCCCCCCCeeeeCCCCCccCCCCCCCC
Q psy9427 132 TARCEDTGATNGKVVCSCPELSVGDPYKTGCV 163 (324)
Q Consensus 132 ~~~C~~~~~~~g~~~C~C~~G~~g~~~~~~C~ 163 (324)
...|.+ ++++|+|.|+.||........|.
T Consensus 589 ~~~C~~---~~~~~~C~C~~g~~l~~d~~~C~ 617 (619)
T 3s94_A 589 SHLCLY---RPQGLRCACPIGFELISDMKTCI 617 (619)
T ss_dssp SSEEEE---ETTEEEEECCTTCEECSSTTCEE
T ss_pred hHhhcc---CCCCeEEECCCCCEECCCCCcCC
Confidence 568999 89999999999998776444453
No 165
>1h9h_I EETI-II, trypsin inhibitor II; hydrolase inhibitor, complex (serine protease/inhibitor), squash inhibitor, cystine knot, hydrolase; 1.5A {Ecballium elaterium} SCOP: g.3.2.1 PDB: 1mcv_I
Probab=25.95 E-value=26 Score=20.07 Aligned_cols=23 Identities=22% Similarity=0.728 Sum_probs=16.6
Q ss_pred cccccCCCCCCCCccc-CCccccc
Q psy9427 295 LGCRQNEECSGQMICA-GSKCTGW 317 (324)
Q Consensus 295 ~~C~~~~~C~~~~~C~-~~~C~np 317 (324)
..|+.++||..+=+|+ +|.|-.|
T Consensus 7 m~CK~DsDCl~~CvC~~~G~~~~~ 30 (36)
T 1h9h_I 7 IRCKQDSDCLAGCVCGPNGFCGSP 30 (36)
T ss_dssp CBCSSGGGSCTTCEECTTSBEECC
T ss_pred cccccccCccccCeEccCCCcCCC
Confidence 4688888888888884 4666544
No 166
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=25.43 E-value=88 Score=28.51 Aligned_cols=32 Identities=25% Similarity=0.468 Sum_probs=22.2
Q ss_pred CCCCCE-ee-eCCCceeeeeCCCeeecCCCCCCcc
Q psy9427 22 CGVNAV-CV-VNNHEARCFCPPGSYVGDPNIECRQ 54 (324)
Q Consensus 22 C~~~~~-C~-~~~~~~~C~C~~G~y~g~~~~~C~~ 54 (324)
|..+|. |. ...+.+.|.|++| |.|...+.|.+
T Consensus 257 Cngh~s~c~~~~~~~~~C~C~~n-t~G~~Ce~C~~ 290 (375)
T 4aqt_A 257 CNGHASECVKNEFDKLMCNCKHN-TYGVDCEKCLP 290 (375)
T ss_dssp CTTSCSCEEECTTSCEEECCCTT-EESTTSCEECT
T ss_pred CCCCCcccCCCCCCCeeeeCcCC-CcCCCcccCCC
Confidence 544443 33 3456788999999 99987776655
No 167
>2l1q_A Liver-expressed antimicrobial peptide 2; polypeptide, disulfides, antimicrobial protein, LEAP-2; NMR {Homo sapiens}
Probab=23.61 E-value=22 Score=21.14 Aligned_cols=18 Identities=33% Similarity=1.025 Sum_probs=10.5
Q ss_pred ccccCCCCCCCCcccCCcc
Q psy9427 296 GCRQNEECSGQMICAGSKC 314 (324)
Q Consensus 296 ~C~~~~~C~~~~~C~~~~C 314 (324)
.|++++|| ....|.+++|
T Consensus 16 ~Crd~~EC-~T~lCR~~~c 33 (40)
T 2l1q_A 16 SCRDDSEC-ITRLCRKRRC 33 (40)
T ss_dssp BCSSGGGB-TTSCEETTEE
T ss_pred hhccchhh-hhHHhcCCCc
Confidence 46666666 4455655555
No 168
>1rju_V Metallothionein; Cu(I)-thiolate, metal binding protein; 1.44A {Synthetic} SCOP: g.46.1.1 PDB: 1aoo_A 1aqq_A 1aqr_A 1fmy_A
Probab=22.87 E-value=60 Score=18.01 Aligned_cols=12 Identities=33% Similarity=1.284 Sum_probs=6.8
Q ss_pred cccccccCCCCC
Q psy9427 293 CELGCRQNEECS 304 (324)
Q Consensus 293 c~~~C~~~~~C~ 304 (324)
|..+|.+++.|+
T Consensus 22 cptgcnsddkcp 33 (36)
T 1rju_V 22 CPTGCNSDDKCP 33 (36)
T ss_dssp SCTTCCCGGGCC
T ss_pred CCCCCCCCCcCC
Confidence 344566666664
No 169
>3hh2_C Follistatin; protein-protein complex, TB domain, cystine knot motif, TGF- fold, disulfide linked dimer, CLE PAIR of basic residues, cytokine; HET: CIT; 2.15A {Homo sapiens} PDB: 2b0u_C* 2p6a_D
Probab=22.31 E-value=65 Score=28.26 Aligned_cols=30 Identities=33% Similarity=1.051 Sum_probs=25.6
Q ss_pred ccccCCCCCCCCCCCEeee-CCCceeeeeCC
Q psy9427 12 TCWNSCDGVSCGVNAVCVV-NNHEARCFCPP 41 (324)
Q Consensus 12 ~c~~~C~~~~C~~~~~C~~-~~~~~~C~C~~ 41 (324)
.|.|+|+...|+.+++|+. ..+..+|+|++
T Consensus 61 pckd~C~~v~C~~g~~C~~~~~g~~~CvC~~ 91 (288)
T 3hh2_C 61 PCKETCENVDCGPGKKCRMNKKNKPRCVCAP 91 (288)
T ss_dssp ESCSSSTTCCCCTTEEEEECTTSCEEEEECC
T ss_pred hhcccCCCCcCCCCCEeeECCCCCeeeeCCc
Confidence 4678999999999999985 67889999975
No 170
>3b4v_C Follistatin-like 3; ligand-inhibitor signalling complex, cleavage on PAIR of BAS residues, glycoprotein, growth factor, hormone, secreted; HET: NAG; 2.48A {Homo sapiens}
Probab=21.86 E-value=53 Score=27.88 Aligned_cols=29 Identities=45% Similarity=1.087 Sum_probs=22.2
Q ss_pred cccCCCCCCCCCCCEeeeCCCceeeeeCC
Q psy9427 13 CWNSCDGVSCGVNAVCVVNNHEARCFCPP 41 (324)
Q Consensus 13 c~~~C~~~~C~~~~~C~~~~~~~~C~C~~ 41 (324)
|.++|....|+.+.+|+...+...|.|++
T Consensus 69 c~~~C~~~~C~~g~~C~~~~g~p~C~C~~ 97 (237)
T 3b4v_C 69 CKDSCDGVECGPGKACRMLGGRPRCECAP 97 (237)
T ss_dssp SCSSSTTCCCCTTEEEEC----CEEEECC
T ss_pred ccCCCCCccCcCCCCCcccCCCccccCCC
Confidence 67889999999999999877888999876
No 171
>1mct_I Trypsin inhibitor A; complex(proteinase/inhibitor); 1.60A {Momordica charantia} SCOP: g.3.2.1 PDB: 1f2s_I
Probab=21.50 E-value=33 Score=18.70 Aligned_cols=20 Identities=25% Similarity=0.994 Sum_probs=14.9
Q ss_pred cccccCCCCCCCCcccCCcc
Q psy9427 295 LGCRQNEECSGQMICAGSKC 314 (324)
Q Consensus 295 ~~C~~~~~C~~~~~C~~~~C 314 (324)
.+|+.++||..+=+|..|-|
T Consensus 8 m~Ck~DsDCl~~C~C~~G~C 27 (28)
T 1mct_I 8 MECTRDSDCMAKCICVAGHC 27 (28)
T ss_dssp CBCSSGGGSSTTCCEETTEE
T ss_pred hhcccccccccCCEeccccc
Confidence 46888888888877776544
No 172
>1udk_A Nawaprin; antiparallel beta-sheet, spiral backbone configuration, unknown function; NMR {Naja nigricollis} SCOP: g.3.14.1
Probab=21.47 E-value=43 Score=20.90 Aligned_cols=21 Identities=24% Similarity=0.718 Sum_probs=15.7
Q ss_pred CccccccccCCCCCCCCcccC
Q psy9427 291 GTCELGCRQNEECSGQMICAG 311 (324)
Q Consensus 291 ~~c~~~C~~~~~C~~~~~C~~ 311 (324)
..|..+|++|.+|+..+.|=.
T Consensus 18 ~~c~~~C~~D~~Cp~~~KCC~ 38 (51)
T 1udk_A 18 GICKTLCNSDSGCPNVQKCCK 38 (51)
T ss_dssp SCCCCCCSSGGGSSTTCEEEC
T ss_pred CcccccCcCcccCCCcccccc
Confidence 346677999999988887743
Done!