Your job contains 1 sequence.
>psy9430
MPGISRKPILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFL
NKRCNVNPARGPFHYRAPARIFWKTPILIDGRGHLLGRLASIVAKTILNGNRVVVVRAEL
LNISGNFFRNKLKYLAFLNKRCNVNPARGPFHYRAPARIFWKTVRGMTPHKLDRGAKALK
RLKVYEGIPPKYARRQRLCVPTALRTVCLKPGRSYCSVGRISHEVGWKYKTIVRHLERKR
REKSIEKIKLHTVYN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy9430
(255 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q3SZ90 - symbol:RPL13A "60S ribosomal protein L... 537 9.2e-52 1
UNIPROTKB|F1PI16 - symbol:RPL13A "60S ribosomal protein L... 535 1.5e-51 1
UNIPROTKB|P40429 - symbol:RPL13A "60S ribosomal protein L... 535 1.5e-51 1
UNIPROTKB|F1RI01 - symbol:RPL13A "60S ribosomal protein L... 535 1.5e-51 1
UNIPROTKB|Q4R8Z2 - symbol:RPL13A "60S ribosomal protein L... 535 1.5e-51 1
FB|FBgn0037351 - symbol:RpL13A "Ribosomal protein L13A" s... 534 1.9e-51 1
MGI|MGI:1351455 - symbol:Rpl13a "ribosomal protein L13A" ... 533 2.4e-51 1
UNIPROTKB|Q5RK10 - symbol:Rpl13a "Neuroprotective protein... 533 2.4e-51 1
UNIPROTKB|Q5RA38 - symbol:RPL13A "60S ribosomal protein L... 530 5.1e-51 1
ZFIN|ZDB-GENE-030131-168 - symbol:rpl13a "ribosomal prote... 530 5.1e-51 1
ASPGD|ASPL0000014757 - symbol:rpl16a species:162425 "Emer... 529 6.5e-51 1
RGD|628697 - symbol:Rpl13a "ribosomal protein L13A" speci... 527 1.1e-50 1
UNIPROTKB|Q9XSU0 - symbol:RPL13A "60S ribosomal protein L... 521 4.6e-50 1
UNIPROTKB|G4MLS0 - symbol:MGG_05449 "60S ribosomal protei... 516 1.5e-49 1
POMBASE|SPAC23A1.11 - symbol:rpl1602 "60S ribosomal prote... 514 2.5e-49 1
POMBASE|SPBC839.13c - symbol:rpl1601 "60S ribosomal prote... 514 2.5e-49 1
POMBASE|SPBC2G2.05 - symbol:rpl1603 "60S ribosomal protei... 511 5.2e-49 1
WB|WBGene00004428 - symbol:rpl-16 species:6239 "Caenorhab... 507 1.4e-48 1
CGD|CAL0005216 - symbol:RPL16A species:5476 "Candida albi... 498 1.2e-47 1
UNIPROTKB|Q5AB87 - symbol:RPL16A "Likely cytosolic riboso... 498 1.2e-47 1
SGD|S000001395 - symbol:RPL16A "Ribosomal 60S subunit pro... 495 2.6e-47 1
SGD|S000005013 - symbol:RPL16B "Ribosomal 60S subunit pro... 478 1.6e-45 1
UNIPROTKB|Q95307 - symbol:RPL13A "60S ribosomal protein L... 464 5.0e-44 1
TAIR|locus:2119335 - symbol:AT4G13170 species:3702 "Arabi... 453 7.3e-43 1
TAIR|locus:2098530 - symbol:AT3G07110 species:3702 "Arabi... 451 1.2e-42 1
TAIR|locus:2156569 - symbol:AT5G48760 species:3702 "Arabi... 450 1.5e-42 1
TAIR|locus:2087268 - symbol:AT3G24830 species:3702 "Arabi... 450 1.5e-42 1
DICTYBASE|DDB_G0275881 - symbol:rpl13a "S60 ribosomal pro... 443 8.4e-42 1
GENEDB_PFALCIPARUM|PF10_0043 - symbol:PF10_0043 "ribosoma... 427 4.2e-40 1
UNIPROTKB|Q8IJZ7 - symbol:PF10_0043 "60S ribosomal protei... 427 4.2e-40 1
UNIPROTKB|G3MXM1 - symbol:G3MXM1 "Uncharacterized protein... 404 1.1e-37 1
UNIPROTKB|I3LN23 - symbol:I3LN23 "Uncharacterized protein... 398 4.9e-37 1
UNIPROTKB|I3L8K3 - symbol:I3L8K3 "Uncharacterized protein... 329 1.0e-29 1
UNIPROTKB|F1RU15 - symbol:F1RU15 "Uncharacterized protein... 290 1.4e-25 1
UNIPROTKB|J9P546 - symbol:J9P546 "Uncharacterized protein... 264 7.8e-23 1
UNIPROTKB|E2QS54 - symbol:E2QS54 "Uncharacterized protein... 183 3.0e-14 1
UNIPROTKB|Q6NVV1 - symbol:Q6NVV1 "Putative 60S ribosomal ... 166 1.9e-12 1
UNIPROTKB|F6UMX6 - symbol:F6UMX6 "Uncharacterized protein... 101 4.6e-05 1
>UNIPROTKB|Q3SZ90 [details] [associations]
symbol:RPL13A "60S ribosomal protein L13a" species:9913
"Bos taurus" [GO:1901194 "negative regulation of formation of
translation preinitiation complex" evidence=ISS] [GO:0017148
"negative regulation of translation" evidence=ISS] [GO:0015934
"large ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR005755 InterPro:IPR005822
InterPro:IPR023563 InterPro:IPR023564 Pfam:PF00572 PROSITE:PS00783
GO:GO:0017148 GO:GO:0006412 GO:GO:0003735 GO:GO:0015934
eggNOG:COG0102 HOGENOM:HOG000225289 KO:K02872 Gene3D:3.90.1180.10
PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
TIGRFAMs:TIGR01077 OMA:FYRNKIK HOVERGEN:HBG062176 EMBL:BC103039
IPI:IPI00712384 RefSeq:NP_001070466.1 UniGene:Bt.49211
ProteinModelPortal:Q3SZ90 SMR:Q3SZ90 STRING:Q3SZ90 PRIDE:Q3SZ90
Ensembl:ENSBTAT00000005007 GeneID:767925 KEGG:bta:767925 CTD:23521
GeneTree:ENSGT00390000010799 InParanoid:Q3SZ90 OrthoDB:EOG479F83
NextBio:20918282 GO:GO:1901194 Uniprot:Q3SZ90
Length = 203
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 96/150 (64%), Positives = 123/150 (82%)
Query: 87 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 146
+++DGRGHLLGRLA+IVAK +L G +VVVVR E +NISGNF+RNKLKYLAFL KR N NP
Sbjct: 7 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 66
Query: 147 ARGPFHYRAPARIFWKTVRGMTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRT 206
+RGP+H+RAP+RIFW+TVRGM PHK RG AL+RLKV++GIPP Y +++R+ VP AL+
Sbjct: 67 SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKVFDGIPPPYDKKKRMVVPAALKV 126
Query: 207 VCLKPGRSYCSVGRISHEVGWKYKTIVRHL 236
V LKP R + +GR++HEVGWKY+ + L
Sbjct: 127 VRLKPTRKFAYLGRLAHEVGWKYQAVTATL 156
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 56/77 (72%), Positives = 69/77 (89%)
Query: 9 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 68
+++DGRGHLLGRLA+IVAK +L G +VVVVR E +NISGNF+RNKLKYLAFL KR N NP
Sbjct: 7 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 66
Query: 69 ARGPFHYRAPARIFWKT 85
+RGP+H+RAP+RIFW+T
Sbjct: 67 SRGPYHFRAPSRIFWRT 83
>UNIPROTKB|F1PI16 [details] [associations]
symbol:RPL13A "60S ribosomal protein L13a" species:9615
"Canis lupus familiaris" [GO:0015934 "large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023563
InterPro:IPR023564 Pfam:PF00572 PROSITE:PS00783 GO:GO:0006412
GO:GO:0003735 GO:GO:0022625 KO:K02872 Gene3D:3.90.1180.10
PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
TIGRFAMs:TIGR01077 OMA:FYRNKIK CTD:23521
GeneTree:ENSGT00390000010799 UniGene:Cfa.40191 EMBL:AAEX03000800
RefSeq:XP_003432774.1 Ensembl:ENSCAFT00000005848 GeneID:403680
KEGG:cfa:403680 NextBio:20817184 Uniprot:F1PI16
Length = 203
Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 96/150 (64%), Positives = 122/150 (81%)
Query: 87 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 146
+++DGRGHLLGRLA+IVAK +L G +VVVVR E +NISGNF+RNKLKYLAFL KR N NP
Sbjct: 7 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 66
Query: 147 ARGPFHYRAPARIFWKTVRGMTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRT 206
+RGP+H+RAP+RIFW+TVRGM PHK RG AL RLKV++GIPP Y +++R+ VP AL+
Sbjct: 67 SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKV 126
Query: 207 VCLKPGRSYCSVGRISHEVGWKYKTIVRHL 236
V LKP R + +GR++HEVGWKY+ + L
Sbjct: 127 VRLKPTRKFAYLGRLAHEVGWKYQAVTATL 156
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 56/77 (72%), Positives = 69/77 (89%)
Query: 9 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 68
+++DGRGHLLGRLA+IVAK +L G +VVVVR E +NISGNF+RNKLKYLAFL KR N NP
Sbjct: 7 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 66
Query: 69 ARGPFHYRAPARIFWKT 85
+RGP+H+RAP+RIFW+T
Sbjct: 67 SRGPYHFRAPSRIFWRT 83
>UNIPROTKB|P40429 [details] [associations]
symbol:RPL13A "60S ribosomal protein L13a" species:9606
"Homo sapiens" [GO:0006412 "translation" evidence=NAS;TAS]
[GO:0003735 "structural constituent of ribosome" evidence=NAS]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IDA]
[GO:0017148 "negative regulation of translation" evidence=IMP;IDA]
[GO:1901194 "negative regulation of formation of translation
preinitiation complex" evidence=IDA] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0071346 "cellular response to
interferon-gamma" evidence=IDA] [GO:0015934 "large ribosomal
subunit" evidence=TAS] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006413 "translational
initiation" evidence=TAS] [GO:0006414 "translational elongation"
evidence=TAS] [GO:0006415 "translational termination" evidence=TAS]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023563
InterPro:IPR023564 Pfam:PF00572 PROSITE:PS00783
Reactome:REACT_116125 GO:GO:0000184 GO:GO:0017148 GO:GO:0006413
GO:GO:0003735 EMBL:CH471177 GO:GO:0071346 GO:GO:0006415
GO:GO:0006414 Reactome:REACT_1762 eggNOG:COG0102 GO:GO:0006614
GO:GO:0022625 GO:GO:0019083 HOGENOM:HOG000225289 KO:K02872
Gene3D:3.90.1180.10 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
SUPFAM:SSF52161 TIGRFAMs:TIGR01077 OMA:FYRNKIK HOVERGEN:HBG062176
CTD:23521 OrthoDB:EOG479F83 GO:GO:1901194 ChiTaRS:RPL13A
EMBL:X56932 EMBL:AB028893 EMBL:AK291120 EMBL:BC000514 EMBL:BC001675
EMBL:BC001836 EMBL:BC062537 EMBL:BC065236 EMBL:BC070223
EMBL:BC071929 IPI:IPI00304612 PIR:S29539 RefSeq:NP_001257420.1
RefSeq:NP_036555.1 UniGene:Hs.523185 ProteinModelPortal:P40429
SMR:P40429 IntAct:P40429 MINT:MINT-1417412 STRING:P40429
PhosphoSite:P40429 DMDM:730451 PaxDb:P40429 PRIDE:P40429
DNASU:23521 Ensembl:ENST00000391857 GeneID:23521 KEGG:hsa:23521
UCSC:uc002pny.3 GeneCards:GC19P049991 H-InvDB:HIX0027968
H-InvDB:HIX0158081 HGNC:HGNC:10304 HPA:HPA038751 neXtProt:NX_P40429
PharmGKB:PA38122 InParanoid:P40429 PhylomeDB:P40429
GenomeRNAi:23521 NextBio:45973 ArrayExpress:P40429 Bgee:P40429
CleanEx:HS_RPL13A Genevestigator:P40429 GermOnline:ENSG00000142541
Uniprot:P40429
Length = 203
Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 96/150 (64%), Positives = 122/150 (81%)
Query: 87 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 146
+++DGRGHLLGRLA+IVAK +L G +VVVVR E +NISGNF+RNKLKYLAFL KR N NP
Sbjct: 7 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 66
Query: 147 ARGPFHYRAPARIFWKTVRGMTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRT 206
+RGP+H+RAP+RIFW+TVRGM PHK RG AL RLKV++GIPP Y +++R+ VP AL+
Sbjct: 67 SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKV 126
Query: 207 VCLKPGRSYCSVGRISHEVGWKYKTIVRHL 236
V LKP R + +GR++HEVGWKY+ + L
Sbjct: 127 VRLKPTRKFAYLGRLAHEVGWKYQAVTATL 156
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 56/77 (72%), Positives = 69/77 (89%)
Query: 9 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 68
+++DGRGHLLGRLA+IVAK +L G +VVVVR E +NISGNF+RNKLKYLAFL KR N NP
Sbjct: 7 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 66
Query: 69 ARGPFHYRAPARIFWKT 85
+RGP+H+RAP+RIFW+T
Sbjct: 67 SRGPYHFRAPSRIFWRT 83
>UNIPROTKB|F1RI01 [details] [associations]
symbol:RPL13A "60S ribosomal protein L13a" species:9823
"Sus scrofa" [GO:0015934 "large ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR005755
InterPro:IPR005822 InterPro:IPR023563 InterPro:IPR023564
Pfam:PF00572 PROSITE:PS00783 GO:GO:0006412 GO:GO:0003735
GO:GO:0015934 KO:K02872 Gene3D:3.90.1180.10 PANTHER:PTHR11545
PANTHER:PTHR11545:SF3 SUPFAM:SSF52161 TIGRFAMs:TIGR01077
OMA:FYRNKIK CTD:23521 GeneTree:ENSGT00390000010799 EMBL:FP102665
RefSeq:NP_001230997.1 UniGene:Ssc.17024 UniGene:Ssc.27927
Ensembl:ENSSSCT00000003516 GeneID:780432 KEGG:ssc:780432
ArrayExpress:F1RI01 Uniprot:F1RI01
Length = 204
Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 96/150 (64%), Positives = 122/150 (81%)
Query: 87 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 146
+++DGRGHLLGRLA+IVAK +L G +VVVVR E +NISGNF+RNKLKYLAFL KR N NP
Sbjct: 8 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 67
Query: 147 ARGPFHYRAPARIFWKTVRGMTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRT 206
+RGP+H+RAP+RIFW+TVRGM PHK RG AL RLKV++GIPP Y +++R+ VP AL+
Sbjct: 68 SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKV 127
Query: 207 VCLKPGRSYCSVGRISHEVGWKYKTIVRHL 236
V LKP R + +GR++HEVGWKY+ + L
Sbjct: 128 VRLKPTRKFAYLGRLAHEVGWKYQAVTATL 157
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 56/77 (72%), Positives = 69/77 (89%)
Query: 9 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 68
+++DGRGHLLGRLA+IVAK +L G +VVVVR E +NISGNF+RNKLKYLAFL KR N NP
Sbjct: 8 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 67
Query: 69 ARGPFHYRAPARIFWKT 85
+RGP+H+RAP+RIFW+T
Sbjct: 68 SRGPYHFRAPSRIFWRT 84
>UNIPROTKB|Q4R8Z2 [details] [associations]
symbol:RPL13A "60S ribosomal protein L13a" species:9541
"Macaca fascicularis" [GO:0017148 "negative regulation of
translation" evidence=ISS] [GO:1901194 "negative regulation of
formation of translation preinitiation complex" evidence=ISS]
InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023563
InterPro:IPR023564 Pfam:PF00572 PROSITE:PS00783 GO:GO:0017148
GO:GO:0006412 GO:GO:0003735 GO:GO:0015934 Gene3D:3.90.1180.10
PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
TIGRFAMs:TIGR01077 HOVERGEN:HBG062176 GO:GO:1901194 EMBL:AB168305
ProteinModelPortal:Q4R8Z2 SMR:Q4R8Z2 PRIDE:Q4R8Z2 Uniprot:Q4R8Z2
Length = 203
Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 96/150 (64%), Positives = 122/150 (81%)
Query: 87 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 146
+++DGRGHLLGRLA+IVAK +L G +VVVVR E +NISGNF+RNKLKYLAFL KR N NP
Sbjct: 7 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 66
Query: 147 ARGPFHYRAPARIFWKTVRGMTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRT 206
+RGP+H+RAP+RIFW+TVRGM PHK RG AL RLKV++GIPP Y +++R+ VP AL+
Sbjct: 67 SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKV 126
Query: 207 VCLKPGRSYCSVGRISHEVGWKYKTIVRHL 236
V LKP R + +GR++HEVGWKY+ + L
Sbjct: 127 VRLKPTRKFAYLGRLAHEVGWKYQAVTTTL 156
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 56/77 (72%), Positives = 69/77 (89%)
Query: 9 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 68
+++DGRGHLLGRLA+IVAK +L G +VVVVR E +NISGNF+RNKLKYLAFL KR N NP
Sbjct: 7 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 66
Query: 69 ARGPFHYRAPARIFWKT 85
+RGP+H+RAP+RIFW+T
Sbjct: 67 SRGPYHFRAPSRIFWRT 83
>FB|FBgn0037351 [details] [associations]
symbol:RpL13A "Ribosomal protein L13A" species:7227
"Drosophila melanogaster" [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0003735 "structural constituent of ribosome" evidence=ISS;IDA]
[GO:0007219 "Notch signaling pathway" evidence=IGI] [GO:0008407
"chaeta morphogenesis" evidence=IMP] [GO:0005840 "ribosome"
evidence=IDA] [GO:0051298 "centrosome duplication" evidence=IMP]
InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023563
InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
EMBL:AE014297 GO:GO:0051298 GO:GO:0006412 GO:GO:0007219
GO:GO:0005840 GO:GO:0003735 GO:GO:0008407 GO:GO:0015934
eggNOG:COG0102 KO:K02872 Gene3D:3.90.1180.10 PANTHER:PTHR11545
PANTHER:PTHR11545:SF3 SUPFAM:SSF52161 TIGRFAMs:TIGR01077
OMA:FYRNKIK CTD:23521 GeneTree:ENSGT00390000010799 EMBL:AY051640
RefSeq:NP_649560.1 UniGene:Dm.4531 ProteinModelPortal:Q9VNE9
SMR:Q9VNE9 DIP:DIP-19002N IntAct:Q9VNE9 MINT:MINT-790225
STRING:Q9VNE9 PaxDb:Q9VNE9 PRIDE:Q9VNE9 EnsemblMetazoa:FBtr0078705
GeneID:40687 KEGG:dme:Dmel_CG1475 FlyBase:FBgn0037351
InParanoid:Q9VNE9 OrthoDB:EOG451C6S PhylomeDB:Q9VNE9 ChiTaRS:RPL13A
GenomeRNAi:40687 NextBio:820056 GermOnline:CG1475 Uniprot:Q9VNE9
Length = 205
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 94/150 (62%), Positives = 122/150 (81%)
Query: 87 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 146
++IDGRGHLLGRLAS+VAK +L G +V VVR E LN+SG+F+RNK+K+LA+L KRCNVNP
Sbjct: 9 VVIDGRGHLLGRLASVVAKYLLQGGKVAVVRCEELNLSGHFYRNKIKFLAYLRKRCNVNP 68
Query: 147 ARGPFHYRAPARIFWKTVRGMTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRT 206
ARGPFH+RAP+RIF+K VRGM PHK RG AL RL+V++GIP Y +R+R+ VP A+R
Sbjct: 69 ARGPFHFRAPSRIFYKAVRGMIPHKTKRGQAALARLRVFDGIPSPYDKRRRVVVPIAMRV 128
Query: 207 VCLKPGRSYCSVGRISHEVGWKYKTIVRHL 236
+ L+ R YC VGR+SHEVGW Y+ +++ L
Sbjct: 129 LTLRSDRKYCQVGRLSHEVGWHYQDVIKSL 158
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 57/84 (67%), Positives = 74/84 (88%)
Query: 1 MPGISRKPILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFL 60
M G++ + ++IDGRGHLLGRLAS+VAK +L G +V VVR E LN+SG+F+RNK+K+LA+L
Sbjct: 1 MTGLTNRTVVIDGRGHLLGRLASVVAKYLLQGGKVAVVRCEELNLSGHFYRNKIKFLAYL 60
Query: 61 NKRCNVNPARGPFHYRAPARIFWK 84
KRCNVNPARGPFH+RAP+RIF+K
Sbjct: 61 RKRCNVNPARGPFHFRAPSRIFYK 84
>MGI|MGI:1351455 [details] [associations]
symbol:Rpl13a "ribosomal protein L13A" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0015934
"large ribosomal subunit" evidence=IEA] [GO:0017148 "negative
regulation of translation" evidence=ISO] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO] [GO:0030529
"ribonucleoprotein complex" evidence=ISO] [GO:0071346 "cellular
response to interferon-gamma" evidence=ISO] [GO:1901194 "negative
regulation of formation of translation preinitiation complex"
evidence=ISO] InterPro:IPR005755 InterPro:IPR005822
InterPro:IPR023563 InterPro:IPR023564 Pfam:PF00572 PROSITE:PS00783
MGI:MGI:1351455 GO:GO:0017148 GO:GO:0006412 GO:GO:0003735
GO:GO:0030529 GO:GO:0071346 GO:GO:0015934 eggNOG:COG0102
HOGENOM:HOG000225289 KO:K02872 Gene3D:3.90.1180.10
PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
TIGRFAMs:TIGR01077 HOVERGEN:HBG062176 CTD:23521 EMBL:X51528
EMBL:BC082289 IPI:IPI00223217 PIR:JL0149 RefSeq:NP_033464.2
UniGene:Mm.180458 ProteinModelPortal:P19253 SMR:P19253
IntAct:P19253 STRING:P19253 PhosphoSite:P19253 PaxDb:P19253
PRIDE:P19253 Ensembl:ENSMUST00000150350 GeneID:22121 KEGG:mmu:22121
InParanoid:P19253 NextBio:301981 Bgee:P19253 CleanEx:MM_RPL13A
Genevestigator:P19253 GermOnline:ENSMUSG00000003426 Uniprot:P19253
Length = 203
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 96/150 (64%), Positives = 122/150 (81%)
Query: 87 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 146
+++DGRGHLLGRLA+IVAK +L G +VVVVR E +NISGNF+RNKLKYLAFL KR N NP
Sbjct: 7 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 66
Query: 147 ARGPFHYRAPARIFWKTVRGMTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRT 206
+RGP+H+RAP+RIFW+TVRGM PHK RG AL+RLKV +GIPP Y +++R+ VP AL+
Sbjct: 67 SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKVLDGIPPPYDKKKRMVVPAALKV 126
Query: 207 VCLKPGRSYCSVGRISHEVGWKYKTIVRHL 236
V LKP R + +GR++HEVGWKY+ + L
Sbjct: 127 VRLKPTRKFAYLGRLAHEVGWKYQAVTATL 156
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 56/77 (72%), Positives = 69/77 (89%)
Query: 9 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 68
+++DGRGHLLGRLA+IVAK +L G +VVVVR E +NISGNF+RNKLKYLAFL KR N NP
Sbjct: 7 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 66
Query: 69 ARGPFHYRAPARIFWKT 85
+RGP+H+RAP+RIFW+T
Sbjct: 67 SRGPYHFRAPSRIFWRT 83
>UNIPROTKB|Q5RK10 [details] [associations]
symbol:Rpl13a "Neuroprotective protein 11" species:10116
"Rattus norvegicus" [GO:0006412 "translation" evidence=IEA]
[GO:0015934 "large ribosomal subunit" evidence=IEA]
InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023563
InterPro:IPR023564 Pfam:PF00572 PROSITE:PS00783 RGD:628697
GO:GO:0006412 GO:GO:0003735 EMBL:CH473979 GO:GO:0022625 KO:K02872
Gene3D:3.90.1180.10 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
SUPFAM:SSF52161 TIGRFAMs:TIGR01077 HOVERGEN:HBG062176 CTD:23521
GeneTree:ENSGT00390000010799 UniGene:Rn.92211 EMBL:BC086382
EMBL:EU000472 IPI:IPI00780235 RefSeq:NP_775462.2 SMR:Q5RK10
STRING:Q5RK10 Ensembl:ENSRNOT00000027976 GeneID:317646
KEGG:rno:317646 InParanoid:Q5RK10 NextBio:672053
Genevestigator:Q5RK10 Uniprot:Q5RK10
Length = 203
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 96/150 (64%), Positives = 122/150 (81%)
Query: 87 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 146
+++DGRGHLLGRLA+IVAK +L G +VVVVR E +NISGNF+RNKLKYLAFL KR N NP
Sbjct: 7 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 66
Query: 147 ARGPFHYRAPARIFWKTVRGMTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRT 206
+RGP+H+RAP+RIFW+TVRGM PHK RG AL+RLKV +GIPP Y +++R+ VP AL+
Sbjct: 67 SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKVLDGIPPPYDKKKRMVVPAALKV 126
Query: 207 VCLKPGRSYCSVGRISHEVGWKYKTIVRHL 236
V LKP R + +GR++HEVGWKY+ + L
Sbjct: 127 VRLKPTRKFAYLGRLAHEVGWKYQAVTATL 156
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 56/77 (72%), Positives = 69/77 (89%)
Query: 9 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 68
+++DGRGHLLGRLA+IVAK +L G +VVVVR E +NISGNF+RNKLKYLAFL KR N NP
Sbjct: 7 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 66
Query: 69 ARGPFHYRAPARIFWKT 85
+RGP+H+RAP+RIFW+T
Sbjct: 67 SRGPYHFRAPSRIFWRT 83
>UNIPROTKB|Q5RA38 [details] [associations]
symbol:RPL13A "60S ribosomal protein L13a" species:9601
"Pongo abelii" [GO:0017148 "negative regulation of translation"
evidence=ISS] [GO:1901194 "negative regulation of formation of
translation preinitiation complex" evidence=ISS] InterPro:IPR005755
InterPro:IPR005822 InterPro:IPR023563 InterPro:IPR023564
Pfam:PF00572 PROSITE:PS00783 GO:GO:0017148 GO:GO:0006412
GO:GO:0003735 GO:GO:0015934 Gene3D:3.90.1180.10 PANTHER:PTHR11545
PANTHER:PTHR11545:SF3 SUPFAM:SSF52161 TIGRFAMs:TIGR01077
HOVERGEN:HBG062176 CTD:23521 GO:GO:1901194 EMBL:CR859183
RefSeq:NP_001125810.1 UniGene:Pab.7590 ProteinModelPortal:Q5RA38
SMR:Q5RA38 GeneID:100172738 KEGG:pon:100172738 InParanoid:Q5RA38
Uniprot:Q5RA38
Length = 203
Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
Identities = 95/150 (63%), Positives = 122/150 (81%)
Query: 87 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 146
+++DGRGHLLGRLA+IVAK +L G +VVVVR E +NISGNF+RNKLKYLAFL KR N +P
Sbjct: 7 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTSP 66
Query: 147 ARGPFHYRAPARIFWKTVRGMTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRT 206
+RGP+H+RAP+RIFW+TVRGM PHK RG AL RLKV++GIPP Y +++R+ VP AL+
Sbjct: 67 SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKV 126
Query: 207 VCLKPGRSYCSVGRISHEVGWKYKTIVRHL 236
V LKP R + +GR++HEVGWKY+ + L
Sbjct: 127 VRLKPTRKFAYLGRLAHEVGWKYQAVTATL 156
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 55/77 (71%), Positives = 69/77 (89%)
Query: 9 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 68
+++DGRGHLLGRLA+IVAK +L G +VVVVR E +NISGNF+RNKLKYLAFL KR N +P
Sbjct: 7 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTSP 66
Query: 69 ARGPFHYRAPARIFWKT 85
+RGP+H+RAP+RIFW+T
Sbjct: 67 SRGPYHFRAPSRIFWRT 83
>ZFIN|ZDB-GENE-030131-168 [details] [associations]
symbol:rpl13a "ribosomal protein L13a" species:7955
"Danio rerio" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0015934 "large ribosomal subunit"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023563
InterPro:IPR023564 Pfam:PF00572 PROSITE:PS00783
ZFIN:ZDB-GENE-030131-168 GO:GO:0006412 GO:GO:0003735 GO:GO:0015934
KO:K02872 Gene3D:3.90.1180.10 PANTHER:PTHR11545
PANTHER:PTHR11545:SF3 SUPFAM:SSF52161 TIGRFAMs:TIGR01077
HOVERGEN:HBG062176 HSSP:O59300 CTD:23521 EMBL:BC047855
IPI:IPI00632292 RefSeq:NP_997949.1 UniGene:Dr.32450
ProteinModelPortal:Q7ZUR9 SMR:Q7ZUR9 STRING:Q7ZUR9 PRIDE:Q7ZUR9
GeneID:560828 KEGG:dre:560828 InParanoid:Q7ZUR9 NextBio:20883635
ArrayExpress:Q7ZUR9 Bgee:Q7ZUR9 Uniprot:Q7ZUR9
Length = 205
Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
Identities = 96/150 (64%), Positives = 122/150 (81%)
Query: 87 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 146
++IDGRGHLLGRL++IVAK +L G+++VVVR E +NISGNF+RNKLKYLAFL KR N NP
Sbjct: 9 LIIDGRGHLLGRLSAIVAKQVLLGHKIVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 68
Query: 147 ARGPFHYRAPARIFWKTVRGMTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRT 206
+RG +H+RAP+RIFW+TVRGM PHK RG AL RLKV++GIPP Y +R+R+ VP AL+
Sbjct: 69 SRGSYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKRKRMVVPAALKI 128
Query: 207 VCLKPGRSYCSVGRISHEVGWKYKTIVRHL 236
V LKP R + +GR++HEVGWKY+ I L
Sbjct: 129 VRLKPTRKFALLGRLAHEVGWKYQAITATL 158
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 55/79 (69%), Positives = 70/79 (88%)
Query: 7 KPILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNV 66
K ++IDGRGHLLGRL++IVAK +L G+++VVVR E +NISGNF+RNKLKYLAFL KR N
Sbjct: 7 KVLIIDGRGHLLGRLSAIVAKQVLLGHKIVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 66
Query: 67 NPARGPFHYRAPARIFWKT 85
NP+RG +H+RAP+RIFW+T
Sbjct: 67 NPSRGSYHFRAPSRIFWRT 85
>ASPGD|ASPL0000014757 [details] [associations]
symbol:rpl16a species:162425 "Emericella nidulans"
[GO:0003735 "structural constituent of ribosome" evidence=TAS]
[GO:0006412 "translation" evidence=TAS] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=TAS] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023563
InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
GO:GO:0006412 EMBL:BN001302 GO:GO:0003735 EMBL:AACD01000068
GO:GO:0015934 HOGENOM:HOG000225289 KO:K02872 OMA:RSAEYYA
Gene3D:3.90.1180.10 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
SUPFAM:SSF52161 TIGRFAMs:TIGR01077 RefSeq:XP_661806.1
ProteinModelPortal:G5EB54 SMR:G5EB54 EnsemblFungi:CADANIAT00004462
GeneID:2873625 KEGG:ani:AN4202.2 Uniprot:G5EB54
Length = 202
Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
Identities = 98/151 (64%), Positives = 121/151 (80%)
Query: 87 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 146
++IDG+GHLLGRLAS VAK +LNG ++VVVR E LNISG FFR KLKY A+L K NP
Sbjct: 8 VVIDGKGHLLGRLASTVAKQLLNGQKIVVVRCEALNISGEFFRAKLKYHAYLRKITRYNP 67
Query: 147 ARG-PFHYRAPARIFWKTVRGMTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALR 205
RG PFH+RAP+RIF+K VRGM PHK RGA AL+RLKV+EG+PP Y +++R+ VP ALR
Sbjct: 68 TRGGPFHFRAPSRIFYKAVRGMIPHKTARGAAALERLKVFEGVPPPYDKKKRVVVPQALR 127
Query: 206 TVCLKPGRSYCSVGRISHEVGWKYKTIVRHL 236
+ L+PGR YC+VGR+SHEVGWKY+ +V L
Sbjct: 128 VLRLRPGRKYCTVGRLSHEVGWKYQDVVARL 158
Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 52/77 (67%), Positives = 62/77 (80%)
Query: 9 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 68
++IDG+GHLLGRLAS VAK +LNG ++VVVR E LNISG FFR KLKY A+L K NP
Sbjct: 8 VVIDGKGHLLGRLASTVAKQLLNGQKIVVVRCEALNISGEFFRAKLKYHAYLRKITRYNP 67
Query: 69 ARG-PFHYRAPARIFWK 84
RG PFH+RAP+RIF+K
Sbjct: 68 TRGGPFHFRAPSRIFYK 84
>RGD|628697 [details] [associations]
symbol:Rpl13a "ribosomal protein L13A" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA;NAS] [GO:0005840 "ribosome" evidence=NAS] [GO:0006412
"translation" evidence=IEA] [GO:0015934 "large ribosomal subunit"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=ISO;ISS] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=ISO]
[GO:0071346 "cellular response to interferon-gamma" evidence=ISO]
[GO:1901194 "negative regulation of formation of translation
preinitiation complex" evidence=ISO;ISS] InterPro:IPR005755
InterPro:IPR005822 InterPro:IPR023563 InterPro:IPR023564
Pfam:PF00572 PROSITE:PS00783 RGD:628697 GO:GO:0017148 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 eggNOG:COG0102 GO:GO:0022625
HOGENOM:HOG000225289 Gene3D:3.90.1180.10 PANTHER:PTHR11545
PANTHER:PTHR11545:SF3 SUPFAM:SSF52161 TIGRFAMs:TIGR01077
HOVERGEN:HBG062176 OrthoDB:EOG479F83 GO:GO:1901194 EMBL:X68282
IPI:IPI00655314 PIR:A53204 UniGene:Rn.92211
ProteinModelPortal:P35427 SMR:P35427 IntAct:P35427 STRING:P35427
PhosphoSite:P35427 PRIDE:P35427 UCSC:RGD:628697 InParanoid:P35427
ArrayExpress:P35427 Genevestigator:P35427
GermOnline:ENSRNOG00000020618 Uniprot:P35427
Length = 203
Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 95/150 (63%), Positives = 121/150 (80%)
Query: 87 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 146
+++DGR HLLGRLA+IVAK +L G +VVVVR E +NISGNF+RNKLKYLAFL KR N NP
Sbjct: 7 LVLDGRSHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 66
Query: 147 ARGPFHYRAPARIFWKTVRGMTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRT 206
+RGP+H+RAP+RIFW+TVRGM PHK RG AL+RLKV +GIPP Y +++R+ VP AL+
Sbjct: 67 SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKVLDGIPPPYDKKKRMVVPAALKV 126
Query: 207 VCLKPGRSYCSVGRISHEVGWKYKTIVRHL 236
V LKP R + +GR++HEVGWKY+ + L
Sbjct: 127 VRLKPTRKFAYLGRLAHEVGWKYQAVTATL 156
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 55/77 (71%), Positives = 68/77 (88%)
Query: 9 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 68
+++DGR HLLGRLA+IVAK +L G +VVVVR E +NISGNF+RNKLKYLAFL KR N NP
Sbjct: 7 LVLDGRSHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 66
Query: 69 ARGPFHYRAPARIFWKT 85
+RGP+H+RAP+RIFW+T
Sbjct: 67 SRGPYHFRAPSRIFWRT 83
>UNIPROTKB|Q9XSU0 [details] [associations]
symbol:RPL13A "60S ribosomal protein L13a" species:9615
"Canis lupus familiaris" [GO:1901194 "negative regulation of
formation of translation preinitiation complex" evidence=ISS]
[GO:0017148 "negative regulation of translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR005755 InterPro:IPR005822
InterPro:IPR023563 InterPro:IPR023564 Pfam:PF00572 PROSITE:PS00783
GO:GO:0017148 GO:GO:0006412 GO:GO:0003735 GO:GO:0015934
eggNOG:COG0102 HOGENOM:HOG000225289 Gene3D:3.90.1180.10
PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
TIGRFAMs:TIGR01077 HOVERGEN:HBG062176 PDB:2ZKR PDBsum:2ZKR
GO:GO:1901194 EMBL:DN325227 EMBL:AJ388525 EMBL:CO660712
UniGene:Cfa.40191 STRING:Q9XSU0 PRIDE:Q9XSU0
EvolutionaryTrace:Q9XSU0 Uniprot:Q9XSU0
Length = 203
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 94/150 (62%), Positives = 120/150 (80%)
Query: 87 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 146
+++DGRGHLLGRLA+IVAK +L G +VVVVR E +NISGNF+RNKL YLAFL KR N NP
Sbjct: 7 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLNYLAFLRKRMNTNP 66
Query: 147 ARGPFHYRAPARIFWKTVRGMTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRT 206
+RGP+ +RAP+RIFW+TVRGM PHK RG AL RLKV++GIPP Y +++R+ VP AL+
Sbjct: 67 SRGPYDFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKV 126
Query: 207 VCLKPGRSYCSVGRISHEVGWKYKTIVRHL 236
V LKP R + +GR++HEVGWKY+ + L
Sbjct: 127 VRLKPTRKFAYLGRLAHEVGWKYQAVTATL 156
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 54/77 (70%), Positives = 67/77 (87%)
Query: 9 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 68
+++DGRGHLLGRLA+IVAK +L G +VVVVR E +NISGNF+RNKL YLAFL KR N NP
Sbjct: 7 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLNYLAFLRKRMNTNP 66
Query: 69 ARGPFHYRAPARIFWKT 85
+RGP+ +RAP+RIFW+T
Sbjct: 67 SRGPYDFRAPSRIFWRT 83
>UNIPROTKB|G4MLS0 [details] [associations]
symbol:MGG_05449 "60S ribosomal protein L16" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR005755 InterPro:IPR005822
InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 GO:GO:0006412
GO:GO:0003735 EMBL:CM001231 GO:GO:0043581 GO:GO:0015934 KO:K02872
Gene3D:3.90.1180.10 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
SUPFAM:SSF52161 TIGRFAMs:TIGR01077 RefSeq:XP_003710310.1
ProteinModelPortal:G4MLS0 SMR:G4MLS0 EnsemblFungi:MGG_05449T0
GeneID:2675933 KEGG:mgr:MGG_05449 Uniprot:G4MLS0
Length = 202
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 95/155 (61%), Positives = 122/155 (78%)
Query: 83 WKTPILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRC 142
+++ ++IDG+GHLLGRLASIVAK +L G ++VVVR E LNISG FFR KLKY A L K
Sbjct: 4 FESVVVIDGKGHLLGRLASIVAKQLLEGQKIVVVRCEALNISGEFFRAKLKYHAHLRKIT 63
Query: 143 NVNPARG-PFHYRAPARIFWKTVRGMTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVP 201
NP RG PFH+RAP+R+F+K VRGM PHK RG AL+RLKV+EG+PP Y +++++ VP
Sbjct: 64 RYNPTRGGPFHFRAPSRVFYKAVRGMMPHKTARGTAALERLKVFEGVPPPYDKQKKMVVP 123
Query: 202 TALRTVCLKPGRSYCSVGRISHEVGWKYKTIVRHL 236
ALR + L+PGR YC+VGR+SHEVGWKY+ +V L
Sbjct: 124 QALRVLRLQPGRKYCTVGRLSHEVGWKYQDVVARL 158
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 51/77 (66%), Positives = 61/77 (79%)
Query: 9 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 68
++IDG+GHLLGRLASIVAK +L G ++VVVR E LNISG FFR KLKY A L K NP
Sbjct: 8 VVIDGKGHLLGRLASIVAKQLLEGQKIVVVRCEALNISGEFFRAKLKYHAHLRKITRYNP 67
Query: 69 ARG-PFHYRAPARIFWK 84
RG PFH+RAP+R+F+K
Sbjct: 68 TRGGPFHFRAPSRVFYK 84
>POMBASE|SPAC23A1.11 [details] [associations]
symbol:rpl1602 "60S ribosomal protein L13/L16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002181
"cytoplasmic translation" evidence=NAS] [GO:0003735 "structural
constituent of ribosome" evidence=ISO] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006412
"translation" evidence=ISO] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISO] InterPro:IPR005755 InterPro:IPR005822
InterPro:IPR023563 InterPro:IPR023564 Pfam:PF00572
PIRSF:PIRSF002181 PROSITE:PS00783 PomBase:SPAC23A1.11 EMBL:CU329670
GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003735 GO:GO:0002181
GO:GO:0022625 HOGENOM:HOG000225289 KO:K02872 Gene3D:3.90.1180.10
PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
TIGRFAMs:TIGR01077 OMA:FYRNKIK PIR:T38231 RefSeq:NP_594441.1
ProteinModelPortal:O42848 SMR:O42848 STRING:O42848 PRIDE:O42848
EnsemblFungi:SPAC23A1.11.1 GeneID:2542006 KEGG:spo:SPAC23A1.11
OrthoDB:EOG4C2MKV NextBio:20803086 Uniprot:O42848
Length = 197
Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 96/150 (64%), Positives = 117/150 (78%)
Query: 87 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 146
++ID +GHLLGRLAS+VAK +L G +VVVVR E LNISG+FFRNKLKYLA+L K C NP
Sbjct: 8 VVIDAKGHLLGRLASVVAKQLLGGQKVVVVRCEELNISGHFFRNKLKYLAYLRKACRYNP 67
Query: 147 ARGPFHYRAPARIFWKTVRGMTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRT 206
+RG FH+RAP+RIF K VRGM PHK RG AL+ L+ EGIPP + +++R+ VP ALR
Sbjct: 68 SRGAFHFRAPSRIFQKAVRGMLPHKTARGQAALEHLQAVEGIPPPFDKQKRVVVPAALRV 127
Query: 207 VCLKPGRSYCSVGRISHEVGWKYKTIVRHL 236
+ LKPGR YC+VGR+S EVGWKY IV L
Sbjct: 128 LRLKPGRKYCTVGRLSSEVGWKYSDIVSKL 157
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 54/79 (68%), Positives = 66/79 (83%)
Query: 6 RKPILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCN 65
+K ++ID +GHLLGRLAS+VAK +L G +VVVVR E LNISG+FFRNKLKYLA+L K C
Sbjct: 5 QKVVVIDAKGHLLGRLASVVAKQLLGGQKVVVVRCEELNISGHFFRNKLKYLAYLRKACR 64
Query: 66 VNPARGPFHYRAPARIFWK 84
NP+RG FH+RAP+RIF K
Sbjct: 65 YNPSRGAFHFRAPSRIFQK 83
>POMBASE|SPBC839.13c [details] [associations]
symbol:rpl1601 "60S ribosomal protein L13/L16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002181
"cytoplasmic translation" evidence=NAS] [GO:0003735 "structural
constituent of ribosome" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006412 "translation" evidence=ISO] [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISO]
InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023563
InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
PomBase:SPBC839.13c EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0003735 GO:GO:0002181 eggNOG:COG0102 GO:GO:0022625
HOGENOM:HOG000225289 KO:K02872 Gene3D:3.90.1180.10
PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
TIGRFAMs:TIGR01077 OMA:HYDTIKQ OrthoDB:EOG4C2MKV EMBL:AB016008
PIR:T40720 PIR:T43381 RefSeq:NP_595253.1 ProteinModelPortal:O42991
SMR:O42991 STRING:O42991 EnsemblFungi:SPBC839.13c.1 GeneID:2541175
KEGG:spo:SPBC839.13c NextBio:20802287 Uniprot:O42991
Length = 197
Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 96/150 (64%), Positives = 117/150 (78%)
Query: 87 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 146
++ID +GHLLGRLAS+VAK +L G +VVVVR E LNISG+FFRNKLKYLA+L K C NP
Sbjct: 8 VVIDAKGHLLGRLASVVAKQLLGGQKVVVVRCEELNISGHFFRNKLKYLAYLRKACRYNP 67
Query: 147 ARGPFHYRAPARIFWKTVRGMTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRT 206
+RG FH+RAP+RIF K VRGM PHK RG AL+ L+ EGIPP + +++R+ VP ALR
Sbjct: 68 SRGAFHFRAPSRIFQKAVRGMLPHKTARGQAALEHLQAVEGIPPPFDKQKRVVVPAALRV 127
Query: 207 VCLKPGRSYCSVGRISHEVGWKYKTIVRHL 236
+ LKPGR YC+VGR+S EVGWKY IV L
Sbjct: 128 LRLKPGRKYCTVGRLSSEVGWKYNDIVAKL 157
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 54/79 (68%), Positives = 66/79 (83%)
Query: 6 RKPILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCN 65
+K ++ID +GHLLGRLAS+VAK +L G +VVVVR E LNISG+FFRNKLKYLA+L K C
Sbjct: 5 QKVVVIDAKGHLLGRLASVVAKQLLGGQKVVVVRCEELNISGHFFRNKLKYLAYLRKACR 64
Query: 66 VNPARGPFHYRAPARIFWK 84
NP+RG FH+RAP+RIF K
Sbjct: 65 YNPSRGAFHFRAPSRIFQK 83
>POMBASE|SPBC2G2.05 [details] [associations]
symbol:rpl1603 "60S ribosomal protein L13/L16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002181
"cytoplasmic translation" evidence=NAS] [GO:0003735 "structural
constituent of ribosome" evidence=ISO] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006412
"translation" evidence=ISO] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISO] InterPro:IPR005755 InterPro:IPR005822
InterPro:IPR023563 InterPro:IPR023564 Pfam:PF00572
PIRSF:PIRSF002181 PROSITE:PS00783 PomBase:SPBC2G2.05 GO:GO:0005730
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003735 GO:GO:0002181
eggNOG:COG0102 GO:GO:0022625 HOGENOM:HOG000225289 KO:K02872
Gene3D:3.90.1180.10 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
SUPFAM:SSF52161 TIGRFAMs:TIGR01077 OrthoDB:EOG4C2MKV PIR:T40144
RefSeq:NP_596434.1 ProteinModelPortal:O43004 SMR:O43004
STRING:O43004 EnsemblFungi:SPBC2G2.05.1 GeneID:2540373
KEGG:spo:SPBC2G2.05 OMA:GPKIPRR NextBio:20801501 Uniprot:O43004
Length = 197
Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 96/150 (64%), Positives = 116/150 (77%)
Query: 87 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 146
++ID +GHL+GRLAS VAK +L G +VVVVR E LNISG+FFRNKLKYLA+L K C NP
Sbjct: 8 VIIDAKGHLMGRLASTVAKQLLAGQKVVVVRCEELNISGHFFRNKLKYLAYLRKACRYNP 67
Query: 147 ARGPFHYRAPARIFWKTVRGMTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRT 206
+RG FH+RAP+RIF K VRGM PHK RG ALK L+ EGIPP + +++RL VP ALR
Sbjct: 68 SRGAFHFRAPSRIFTKAVRGMLPHKTTRGNIALKNLQALEGIPPPFDKQKRLVVPAALRV 127
Query: 207 VCLKPGRSYCSVGRISHEVGWKYKTIVRHL 236
+ LKP R YC++GR+S EVGWKYK IV L
Sbjct: 128 LRLKPSRKYCTIGRLSSEVGWKYKNIVSKL 157
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 53/79 (67%), Positives = 65/79 (82%)
Query: 6 RKPILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCN 65
+K ++ID +GHL+GRLAS VAK +L G +VVVVR E LNISG+FFRNKLKYLA+L K C
Sbjct: 5 QKLVIIDAKGHLMGRLASTVAKQLLAGQKVVVVRCEELNISGHFFRNKLKYLAYLRKACR 64
Query: 66 VNPARGPFHYRAPARIFWK 84
NP+RG FH+RAP+RIF K
Sbjct: 65 YNPSRGAFHFRAPSRIFTK 83
>WB|WBGene00004428 [details] [associations]
symbol:rpl-16 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015934 "large
ribosomal subunit" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023563
InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0006412
GO:GO:0003735 GO:GO:0015934 eggNOG:COG0102 EMBL:Z46381
HOGENOM:HOG000225289 KO:K02872 Gene3D:3.90.1180.10
PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
TIGRFAMs:TIGR01077 OMA:FYRNKIK GeneTree:ENSGT00390000010799
EMBL:U31528 PIR:T23654 RefSeq:NP_497721.1 UniGene:Cel.23339
ProteinModelPortal:Q27389 SMR:Q27389 DIP:DIP-25636N
MINT:MINT-1065156 STRING:Q27389 PaxDb:Q27389
EnsemblMetazoa:M01F1.2.1 EnsemblMetazoa:M01F1.2.2 GeneID:175455
KEGG:cel:CELE_M01F1.2 UCSC:M01F1.2.2 CTD:175455 WormBase:M01F1.2
InParanoid:Q27389 NextBio:888232 Uniprot:Q27389
Length = 202
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 93/150 (62%), Positives = 120/150 (80%)
Query: 87 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 146
I+IDG+ HLLGRLASIVAK +L G++VVV+RAE + ISGNF R+KLKY++FL KRCN+NP
Sbjct: 8 IIIDGKNHLLGRLASIVAKKLLQGDKVVVLRAEEIVISGNFHRSKLKYMSFLRKRCNINP 67
Query: 147 ARGPFHYRAPARIFWKTVRGMTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRT 206
ARG FHYRAP +IFW+TVRGM PHK +RG +ALK L+ YEG+P KY + + L P+A R
Sbjct: 68 ARGAFHYRAPGKIFWRTVRGMLPHKTNRGNEALKNLRAYEGVPAKYQKTKSLHAPSASR- 126
Query: 207 VCLKPGRSYCSVGRISHEVGWKYKTIVRHL 236
L+P R +C VGR+SHEVGW+++ +V L
Sbjct: 127 FRLQPRRKFCVVGRLSHEVGWQFQDVVAKL 156
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 57/83 (68%), Positives = 72/83 (86%)
Query: 3 GISRKPILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNK 62
G+S + I+IDG+ HLLGRLASIVAK +L G++VVV+RAE + ISGNF R+KLKY++FL K
Sbjct: 2 GLSNRAIIIDGKNHLLGRLASIVAKKLLQGDKVVVLRAEEIVISGNFHRSKLKYMSFLRK 61
Query: 63 RCNVNPARGPFHYRAPARIFWKT 85
RCN+NPARG FHYRAP +IFW+T
Sbjct: 62 RCNINPARGAFHYRAPGKIFWRT 84
>CGD|CAL0005216 [details] [associations]
symbol:RPL16A species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0071216 "cellular response to
biotic stimulus" evidence=IMP] InterPro:IPR005755
InterPro:IPR005822 InterPro:IPR023563 InterPro:IPR023564
Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783 CGD:CAL0005216
GO:GO:0071216 GO:GO:0036180 GO:GO:0016020 GO:GO:0006412
GO:GO:0003735 GO:GO:0009267 EMBL:AACQ01000036 EMBL:AACQ01000035
GO:GO:0036170 GO:GO:0032040 GO:GO:0015934 eggNOG:COG0102
HOGENOM:HOG000225289 KO:K02872 Gene3D:3.90.1180.10
PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
TIGRFAMs:TIGR01077 RefSeq:XP_718943.1 RefSeq:XP_719047.1
ProteinModelPortal:Q5AB87 SMR:Q5AB87 STRING:Q5AB87 GeneID:3639338
GeneID:3639461 KEGG:cal:CaO19.13504 KEGG:cal:CaO19.6085
Uniprot:Q5AB87
Length = 200
Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 92/150 (61%), Positives = 117/150 (78%)
Query: 87 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 146
++IDG+GHLLGRLASIV+K ILNG +VVVVR E LNISG FFRNKLKY +L K N
Sbjct: 8 VVIDGKGHLLGRLASIVSKQILNGQKVVVVRCEELNISGEFFRNKLKYHDYLRKATRYNK 67
Query: 147 ARGPFHYRAPARIFWKTVRGMTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRT 206
+GPFH+RAP+RI +K +RGM PHK RG AL+RLKV+EG+PP Y +++R+ VP ALR
Sbjct: 68 KKGPFHFRAPSRILYKAIRGMIPHKTARGKAALERLKVFEGVPPPYDKKKRVVVPQALRV 127
Query: 207 VCLKPGRSYCSVGRISHEVGWKYKTIVRHL 236
+ LKPGR Y +VG++S VGWKY+++V L
Sbjct: 128 LRLKPGRKYTTVGKLSSAVGWKYESVVEKL 157
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 52/78 (66%), Positives = 62/78 (79%)
Query: 7 KPILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNV 66
K ++IDG+GHLLGRLASIV+K ILNG +VVVVR E LNISG FFRNKLKY +L K
Sbjct: 6 KVVVIDGKGHLLGRLASIVSKQILNGQKVVVVRCEELNISGEFFRNKLKYHDYLRKATRY 65
Query: 67 NPARGPFHYRAPARIFWK 84
N +GPFH+RAP+RI +K
Sbjct: 66 NKKKGPFHFRAPSRILYK 83
>UNIPROTKB|Q5AB87 [details] [associations]
symbol:RPL16A "Likely cytosolic ribosomal protein L16"
species:237561 "Candida albicans SC5314" [GO:0009267 "cellular
response to starvation" evidence=IMP] [GO:0016020 "membrane"
evidence=IDA] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0032040 "small-subunit processome" evidence=IDA] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0071216 "cellular response to
biotic stimulus" evidence=IMP] InterPro:IPR005755
InterPro:IPR005822 InterPro:IPR023563 InterPro:IPR023564
Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783 CGD:CAL0005216
GO:GO:0071216 GO:GO:0036180 GO:GO:0016020 GO:GO:0006412
GO:GO:0003735 GO:GO:0009267 EMBL:AACQ01000036 EMBL:AACQ01000035
GO:GO:0036170 GO:GO:0032040 GO:GO:0015934 eggNOG:COG0102
HOGENOM:HOG000225289 KO:K02872 Gene3D:3.90.1180.10
PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
TIGRFAMs:TIGR01077 RefSeq:XP_718943.1 RefSeq:XP_719047.1
ProteinModelPortal:Q5AB87 SMR:Q5AB87 STRING:Q5AB87 GeneID:3639338
GeneID:3639461 KEGG:cal:CaO19.13504 KEGG:cal:CaO19.6085
Uniprot:Q5AB87
Length = 200
Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 92/150 (61%), Positives = 117/150 (78%)
Query: 87 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 146
++IDG+GHLLGRLASIV+K ILNG +VVVVR E LNISG FFRNKLKY +L K N
Sbjct: 8 VVIDGKGHLLGRLASIVSKQILNGQKVVVVRCEELNISGEFFRNKLKYHDYLRKATRYNK 67
Query: 147 ARGPFHYRAPARIFWKTVRGMTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRT 206
+GPFH+RAP+RI +K +RGM PHK RG AL+RLKV+EG+PP Y +++R+ VP ALR
Sbjct: 68 KKGPFHFRAPSRILYKAIRGMIPHKTARGKAALERLKVFEGVPPPYDKKKRVVVPQALRV 127
Query: 207 VCLKPGRSYCSVGRISHEVGWKYKTIVRHL 236
+ LKPGR Y +VG++S VGWKY+++V L
Sbjct: 128 LRLKPGRKYTTVGKLSSAVGWKYESVVEKL 157
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 52/78 (66%), Positives = 62/78 (79%)
Query: 7 KPILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNV 66
K ++IDG+GHLLGRLASIV+K ILNG +VVVVR E LNISG FFRNKLKY +L K
Sbjct: 6 KVVVIDGKGHLLGRLASIVSKQILNGQKVVVVRCEELNISGEFFRNKLKYHDYLRKATRY 65
Query: 67 NPARGPFHYRAPARIFWK 84
N +GPFH+RAP+RI +K
Sbjct: 66 NKKKGPFHFRAPSRILYK 83
>SGD|S000001395 [details] [associations]
symbol:RPL16A "Ribosomal 60S subunit protein L16A"
species:4932 "Saccharomyces cerevisiae" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0015934 "large
ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;TAS] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=TAS] [GO:0002181 "cytoplasmic translation" evidence=TAS]
[GO:0003723 "RNA binding" evidence=IDA] InterPro:IPR005755
InterPro:IPR005822 InterPro:IPR023563 InterPro:IPR023564
Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783 SGD:S000001395
EMBL:BK006942 GO:GO:0003723 GO:GO:0003735 GO:GO:0002181 EMBL:Z38059
PDB:4B6A PDBsum:4B6A GO:GO:0022625 HOGENOM:HOG000225289 KO:K02872
Gene3D:3.90.1180.10 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
SUPFAM:SSF52161 TIGRFAMs:TIGR01077 OMA:EFGPYFP PDB:1K5Y PDB:1S1I
PDB:3IZS PDB:3O58 PDB:3O5H PDB:3U5E PDB:3U5I PDBsum:1K5Y
PDBsum:1S1I PDBsum:3IZS PDBsum:3O58 PDBsum:3O5H PDBsum:3U5E
PDBsum:3U5I GeneTree:ENSGT00390000010799 OrthoDB:EOG4C2MKV
PIR:S48401 RefSeq:NP_012133.1 ProteinModelPortal:P26784 SMR:P26784
IntAct:P26784 MINT:MINT-2981627 STRING:P26784 PeptideAtlas:P26784
EnsemblFungi:YIL133C GeneID:854673 KEGG:sce:YIL133C
EvolutionaryTrace:P26784 NextBio:977265 ArrayExpress:P26784
Genevestigator:P26784 GermOnline:YIL133C Uniprot:P26784
Length = 199
Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
Identities = 92/150 (61%), Positives = 117/150 (78%)
Query: 87 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 146
++IDG+GHL+GRLAS+VAK +LNG ++VVVRAE LNISG FFRNKLKY FL K N
Sbjct: 7 VVIDGKGHLVGRLASVVAKQLLNGQKIVVVRAEELNISGEFFRNKLKYHDFLRKATAFNK 66
Query: 147 ARGPFHYRAPARIFWKTVRGMTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRT 206
RGPFH+RAP+RIF+K +RGM HK RG AL+RLKV+EGIPP Y +++R+ VP ALR
Sbjct: 67 TRGPFHFRAPSRIFYKALRGMVSHKTARGKAALERLKVFEGIPPPYDKKKRVVVPQALRV 126
Query: 207 VCLKPGRSYCSVGRISHEVGWKYKTIVRHL 236
+ LKPGR Y ++G++S VGWKY+ +V L
Sbjct: 127 LRLKPGRKYTTLGKLSTSVGWKYEDVVAKL 156
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 54/82 (65%), Positives = 67/82 (81%)
Query: 4 ISRKPIL-IDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNK 62
+S +P++ IDG+GHL+GRLAS+VAK +LNG ++VVVRAE LNISG FFRNKLKY FL K
Sbjct: 1 MSVEPVVVIDGKGHLVGRLASVVAKQLLNGQKIVVVRAEELNISGEFFRNKLKYHDFLRK 60
Query: 63 RCNVNPARGPFHYRAPARIFWK 84
N RGPFH+RAP+RIF+K
Sbjct: 61 ATAFNKTRGPFHFRAPSRIFYK 82
>SGD|S000005013 [details] [associations]
symbol:RPL16B "Ribosomal 60S subunit protein L16B"
species:4932 "Saccharomyces cerevisiae" [GO:0005840 "ribosome"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;TAS] [GO:0003723 "RNA binding" evidence=IDA]
[GO:0002181 "cytoplasmic translation" evidence=TAS] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=TAS] [GO:0015934 "large ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR005755
InterPro:IPR005822 InterPro:IPR023563 InterPro:IPR023564
Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783 SGD:S000005013
EMBL:BK006947 GO:GO:0003723 GO:GO:0003735 GO:GO:0002181 EMBL:X86470
eggNOG:COG0102 GO:GO:0022625 HOGENOM:HOG000225289 KO:K02872
OMA:RSAEYYA Gene3D:3.90.1180.10 PANTHER:PTHR11545
PANTHER:PTHR11545:SF3 SUPFAM:SSF52161 TIGRFAMs:TIGR01077
GeneTree:ENSGT00390000010799 OrthoDB:EOG4C2MKV EMBL:Z71345
PIR:S53911 RefSeq:NP_014330.1 ProteinModelPortal:P26785 SMR:P26785
IntAct:P26785 STRING:P26785 PaxDb:P26785 PeptideAtlas:P26785
EnsemblFungi:YNL069C GeneID:855655 KEGG:sce:YNL069C NextBio:979911
Genevestigator:P26785 GermOnline:YNL069C Uniprot:P26785
Length = 198
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 88/150 (58%), Positives = 113/150 (75%)
Query: 87 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 146
++ID + HLLGRLAS +AK +LNG ++VVVRAE LNISG FFRNKLKY FL K N
Sbjct: 6 VVIDAKDHLLGRLASTIAKQVLNGQKIVVVRAEALNISGEFFRNKLKYHDFLRKATAFNK 65
Query: 147 ARGPFHYRAPARIFWKTVRGMTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRT 206
RGPFH+RAP+RI +K +RGM HK RG AL+RLK++EGIPP Y +++R+ VP ALR
Sbjct: 66 TRGPFHFRAPSRILYKAIRGMVSHKTARGKAALERLKIFEGIPPPYDKKKRVVVPQALRV 125
Query: 207 VCLKPGRSYCSVGRISHEVGWKYKTIVRHL 236
+ LKPGR Y ++G++S VGWKY+ +V L
Sbjct: 126 LRLKPGRKYTTLGKLSTSVGWKYEDVVAKL 155
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 50/81 (61%), Positives = 62/81 (76%)
Query: 4 ISRKPILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKR 63
+S+ ++ID + HLLGRLAS +AK +LNG ++VVVRAE LNISG FFRNKLKY FL K
Sbjct: 1 MSQPVVVIDAKDHLLGRLASTIAKQVLNGQKIVVVRAEALNISGEFFRNKLKYHDFLRKA 60
Query: 64 CNVNPARGPFHYRAPARIFWK 84
N RGPFH+RAP+RI +K
Sbjct: 61 TAFNKTRGPFHFRAPSRILYK 81
>UNIPROTKB|Q95307 [details] [associations]
symbol:RPL13A "60S ribosomal protein L13a" species:9823
"Sus scrofa" [GO:1901194 "negative regulation of formation of
translation preinitiation complex" evidence=ISS] [GO:0017148
"negative regulation of translation" evidence=ISS] [GO:0015934
"large ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR005755 InterPro:IPR005822
InterPro:IPR023563 InterPro:IPR023564 Pfam:PF00572
PIRSF:PIRSF002181 PROSITE:PS00783 GO:GO:0017148 GO:GO:0006412
GO:GO:0003735 GO:GO:0015934 eggNOG:COG0102 HOGENOM:HOG000225289
Gene3D:3.90.1180.10 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
SUPFAM:SSF52161 TIGRFAMs:TIGR01077 HOVERGEN:HBG062176
OrthoDB:EOG479F83 GO:GO:1901194 EMBL:Z81152 EMBL:Z84103
STRING:Q95307 PRIDE:Q95307 Uniprot:Q95307
Length = 137
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 86/135 (63%), Positives = 109/135 (80%)
Query: 87 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 146
+++DGRGHLLGRLA+IVAK +L G +VVVVR E +NISGNF+RNKLKYLAFL KR N NP
Sbjct: 3 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 62
Query: 147 ARGPFHYRAPARIFWKTVRGMTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRT 206
+RGP+H+RAP+RIFW+TVRGM PHK RG AL RLKV++GIPP Y +++R+ VP AL+
Sbjct: 63 SRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKV 122
Query: 207 VCLKPGRSYCSVGRI 221
V LK + +GR+
Sbjct: 123 VRLKLTGKFXYLGRL 137
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 56/77 (72%), Positives = 69/77 (89%)
Query: 9 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 68
+++DGRGHLLGRLA+IVAK +L G +VVVVR E +NISGNF+RNKLKYLAFL KR N NP
Sbjct: 3 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 62
Query: 69 ARGPFHYRAPARIFWKT 85
+RGP+H+RAP+RIFW+T
Sbjct: 63 SRGPYHFRAPSRIFWRT 79
>TAIR|locus:2119335 [details] [associations]
symbol:AT4G13170 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0015934 "large ribosomal subunit" evidence=IEA] [GO:0016020
"membrane" evidence=IDA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IDA] InterPro:IPR005755 InterPro:IPR005822
InterPro:IPR023563 InterPro:IPR023564 Pfam:PF00572
PIRSF:PIRSF002181 PROSITE:PS00783 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016020 GO:GO:0006412 GO:GO:0003735
EMBL:AL049751 EMBL:AL161535 eggNOG:COG0102 GO:GO:0022625
HOGENOM:HOG000225289 KO:K02872 ProtClustDB:CLSN2684535
Gene3D:3.90.1180.10 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
SUPFAM:SSF52161 TIGRFAMs:TIGR01077 EMBL:AY052263 EMBL:AY060518
IPI:IPI00537926 PIR:T07697 RefSeq:NP_193053.1 UniGene:At.3259
ProteinModelPortal:Q9SVR0 SMR:Q9SVR0 STRING:Q9SVR0 PaxDb:Q9SVR0
PRIDE:Q9SVR0 EnsemblPlants:AT4G13170.1 GeneID:826931
KEGG:ath:AT4G13170 GeneFarm:217 TAIR:At4g13170 InParanoid:Q9SVR0
OMA:FYRNKIK PhylomeDB:Q9SVR0 Genevestigator:Q9SVR0
GermOnline:AT4G13170 Uniprot:Q9SVR0
Length = 206
Score = 453 (164.5 bits), Expect = 7.3e-43, P = 7.3e-43
Identities = 81/150 (54%), Positives = 108/150 (72%)
Query: 87 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 146
+++DGR H+LGRLAS AK +LNG VVVVR E + +SG R K+KY+ FL KR N P
Sbjct: 12 VVVDGRHHMLGRLASNTAKELLNGQEVVVVRCEEICLSGGLVRQKMKYMRFLRKRMNTKP 71
Query: 147 ARGPFHYRAPARIFWKTVRGMTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRT 206
+ GP H+RAP++IFW+TVRGM PHK RGA AL RLKV+EGIPP Y + +R+ +P AL+
Sbjct: 72 SHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGIPPPYDKIKRMVIPDALKV 131
Query: 207 VCLKPGRSYCSVGRISHEVGWKYKTIVRHL 236
+ L+ G YC +GR+S EVGW + ++ L
Sbjct: 132 LRLQSGHKYCLLGRLSSEVGWNHYDTIKEL 161
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 46/83 (55%), Positives = 60/83 (72%)
Query: 3 GISRKPILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNK 62
GI K +++DGR H+LGRLAS AK +LNG VVVVR E + +SG R K+KY+ FL K
Sbjct: 6 GICAKRVVVDGRHHMLGRLASNTAKELLNGQEVVVVRCEEICLSGGLVRQKMKYMRFLRK 65
Query: 63 RCNVNPARGPFHYRAPARIFWKT 85
R N P+ GP H+RAP++IFW+T
Sbjct: 66 RMNTKPSHGPIHFRAPSKIFWRT 88
>TAIR|locus:2098530 [details] [associations]
symbol:AT3G07110 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0015934 "large ribosomal subunit" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0022626 "cytosolic ribosome" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0001510 "RNA methylation" evidence=RCA] InterPro:IPR005755
InterPro:IPR005822 InterPro:IPR023563 InterPro:IPR023564
Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783 GO:GO:0009506
GO:GO:0009507 EMBL:CP002686 GO:GO:0005730 GO:GO:0016020
GO:GO:0006412 GO:GO:0003735 GO:GO:0022625 KO:K02872
Gene3D:3.90.1180.10 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
SUPFAM:SSF52161 TIGRFAMs:TIGR01077 UniGene:At.20766 OMA:HYDTIKQ
IPI:IPI00656921 RefSeq:NP_001030654.1 ProteinModelPortal:F4JD96
SMR:F4JD96 PRIDE:F4JD96 EnsemblPlants:AT3G07110.2 GeneID:819897
KEGG:ath:AT3G07110 Uniprot:F4JD96
Length = 207
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 82/151 (54%), Positives = 109/151 (72%)
Query: 87 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 146
+++D R H+LGRLAS+VAK +LNG +VVVR E + +SG R K+KY+ FL KR N P
Sbjct: 12 VVVDARHHMLGRLASVVAKDLLNGQNIVVVRCEEICLSGGLVRQKMKYMRFLRKRMNTKP 71
Query: 147 ARGPFHYRAPARIFWKTVRGMTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRT 206
+ GP H+RAP++IFW+TVRGM PHK RGA AL RLKV+EG+P Y + +R+ VP AL+
Sbjct: 72 SHGPIHFRAPSKIFWRTVRGMIPHKTKRGANALARLKVFEGVPTPYDKIKRMVVPDALKV 131
Query: 207 VCLKPGRSYCSVGRISHEVGWK-YKTIVRHL 236
+ L+ G YC +GR+S EVGW Y TI + L
Sbjct: 132 LRLQAGHKYCLLGRLSSEVGWNHYDTIKQEL 162
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 45/83 (54%), Positives = 61/83 (73%)
Query: 3 GISRKPILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNK 62
GI K +++D R H+LGRLAS+VAK +LNG +VVVR E + +SG R K+KY+ FL K
Sbjct: 6 GICAKRVVVDARHHMLGRLASVVAKDLLNGQNIVVVRCEEICLSGGLVRQKMKYMRFLRK 65
Query: 63 RCNVNPARGPFHYRAPARIFWKT 85
R N P+ GP H+RAP++IFW+T
Sbjct: 66 RMNTKPSHGPIHFRAPSKIFWRT 88
>TAIR|locus:2156569 [details] [associations]
symbol:AT5G48760 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0015934 "large ribosomal subunit" evidence=IEA;ISS] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IDA] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009664 "plant-type cell wall organization"
evidence=RCA] [GO:0042545 "cell wall modification" evidence=RCA]
InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023563
InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006412 GO:GO:0003735
EMBL:AB012242 GO:GO:0022625 HOGENOM:HOG000225289 KO:K02872
ProtClustDB:CLSN2684535 Gene3D:3.90.1180.10 PANTHER:PTHR11545
PANTHER:PTHR11545:SF3 SUPFAM:SSF52161 TIGRFAMs:TIGR01077
EMBL:AY090359 EMBL:AY122902 EMBL:AY088191 EMBL:Z26407
IPI:IPI00531944 RefSeq:NP_001078737.1 RefSeq:NP_199687.1
UniGene:At.20766 UniGene:At.25519 UniGene:At.72564
ProteinModelPortal:Q9FKC0 SMR:Q9FKC0 STRING:Q9FKC0 PRIDE:Q9FKC0
EnsemblPlants:AT5G48760.1 EnsemblPlants:AT5G48760.2 GeneID:834934
KEGG:ath:AT5G48760 GeneFarm:214 TAIR:At5g48760 InParanoid:Q9FKC0
OMA:EFGPYFP PhylomeDB:Q9FKC0 Genevestigator:Q9FKC0
GermOnline:AT5G48760 Uniprot:Q9FKC0
Length = 206
Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
Identities = 79/150 (52%), Positives = 108/150 (72%)
Query: 87 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 146
+++D R H+LGRLASI AK +LNG +VV+VR E + +SG R K+KY+ FL KR N P
Sbjct: 12 VVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYMRFLRKRMNTKP 71
Query: 147 ARGPFHYRAPARIFWKTVRGMTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRT 206
+ GP H+RAP++IFW+TVRGM PHK RGA AL RLKVYEG+P Y + +R+ +P AL+
Sbjct: 72 SHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPTPYDKIKRMVIPDALKV 131
Query: 207 VCLKPGRSYCSVGRISHEVGWKYKTIVRHL 236
+ L+ G YC +GR+S EVGW + ++ L
Sbjct: 132 LRLQAGHKYCLLGRLSSEVGWNHYDTIKEL 161
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 45/83 (54%), Positives = 61/83 (73%)
Query: 3 GISRKPILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNK 62
GI K +++D R H+LGRLASI AK +LNG +VV+VR E + +SG R K+KY+ FL K
Sbjct: 6 GICSKRVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYMRFLRK 65
Query: 63 RCNVNPARGPFHYRAPARIFWKT 85
R N P+ GP H+RAP++IFW+T
Sbjct: 66 RMNTKPSHGPIHFRAPSKIFWRT 88
>TAIR|locus:2087268 [details] [associations]
symbol:AT3G24830 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0015934 "large ribosomal subunit" evidence=IEA;ISS] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR005755 InterPro:IPR005822
InterPro:IPR023563 InterPro:IPR023564 Pfam:PF00572
PIRSF:PIRSF002181 PROSITE:PS00783 GO:GO:0009506 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0016020 GO:GO:0006412 GO:GO:0003735
EMBL:AB028609 eggNOG:COG0102 GO:GO:0022625 EMBL:AY080870
EMBL:AY150392 IPI:IPI00547010 RefSeq:NP_189127.1 UniGene:At.23983
UniGene:At.2870 UniGene:At.43372 ProteinModelPortal:Q9LRX8
SMR:Q9LRX8 IntAct:Q9LRX8 STRING:Q9LRX8 PaxDb:Q9LRX8 PRIDE:Q9LRX8
EnsemblPlants:AT3G24830.1 GeneID:822081 KEGG:ath:AT3G24830
GeneFarm:158 TAIR:At3g24830 HOGENOM:HOG000225289 InParanoid:Q9LRX8
KO:K02872 OMA:RSAEYYA PhylomeDB:Q9LRX8 ProtClustDB:CLSN2684535
Genevestigator:Q9LRX8 GermOnline:AT3G24830 Gene3D:3.90.1180.10
PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
TIGRFAMs:TIGR01077 Uniprot:Q9LRX8
Length = 206
Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
Identities = 79/150 (52%), Positives = 108/150 (72%)
Query: 87 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 146
+++D R H+ GRLASI+AK +LNG VVVVR E + +SG R K+KY+ FL KR N P
Sbjct: 12 VVVDARHHMCGRLASIIAKELLNGQSVVVVRCEEICLSGGLVRQKMKYMRFLRKRMNTKP 71
Query: 147 ARGPFHYRAPARIFWKTVRGMTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRT 206
+ GP H+RAP++IFW+TVRGM PHK RGA AL RLKV+EG+PP Y + +R+ +P AL+
Sbjct: 72 SHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGVPPPYDKVKRMVIPDALKV 131
Query: 207 VCLKPGRSYCSVGRISHEVGWKYKTIVRHL 236
+ L+ G YC +GR+S EVGW + ++ L
Sbjct: 132 LRLQAGHKYCLLGRLSSEVGWNHYDTIKEL 161
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 45/83 (54%), Positives = 60/83 (72%)
Query: 3 GISRKPILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNK 62
GI K +++D R H+ GRLASI+AK +LNG VVVVR E + +SG R K+KY+ FL K
Sbjct: 6 GICSKRVVVDARHHMCGRLASIIAKELLNGQSVVVVRCEEICLSGGLVRQKMKYMRFLRK 65
Query: 63 RCNVNPARGPFHYRAPARIFWKT 85
R N P+ GP H+RAP++IFW+T
Sbjct: 66 RMNTKPSHGPIHFRAPSKIFWRT 88
>DICTYBASE|DDB_G0275881 [details] [associations]
symbol:rpl13a "S60 ribosomal protein L13a"
species:44689 "Dictyostelium discoideum" [GO:0005615 "extracellular
space" evidence=IDA] [GO:0015934 "large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023563
InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
dictyBase:DDB_G0275881 GO:GO:0005615 GO:GO:0006412
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0003735
GO:GO:0015934 eggNOG:COG0102 KO:K02872 Gene3D:3.90.1180.10
PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
TIGRFAMs:TIGR01077 HSSP:O59300 RefSeq:XP_643542.1
ProteinModelPortal:Q553M7 SMR:Q553M7 STRING:Q553M7 PRIDE:Q553M7
EnsemblProtists:DDB0231192 GeneID:8620124 KEGG:ddi:DDB_G0275881
OMA:HYDTIKQ ProtClustDB:PTZ00068 Uniprot:Q553M7
Length = 187
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 86/156 (55%), Positives = 111/156 (71%)
Query: 81 IFWKTPILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNK 140
+F K I+IDG+GHLLGRLAS+VAK++L+G ++VVVR E LNISG RNKLK+ FLN
Sbjct: 1 MFQKKAIVIDGKGHLLGRLASVVAKSLLSGQKIVVVRCEELNISGPLSRNKLKWADFLNL 60
Query: 141 RCNVNPARGPFHYRAPARIFWKTVRGMTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCV 200
N N ARG H R+P++IFW+ VRGM PHK RG AL +KV+EG+P Y + +R+ V
Sbjct: 61 TMNTNHARGHRHGRSPSKIFWRAVRGMLPHKTPRGQAALDNMKVFEGVPAPYDKVKRVVV 120
Query: 201 PTALRTVCLKPGRSYCSVGRISHEVGWKYKTIVRHL 236
P+ALR V L R Y + R+S EVGWKY+ +V L
Sbjct: 121 PSALRVVKLNTTRKYTVLSRLSQEVGWKYRAVVAKL 156
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 48/79 (60%), Positives = 62/79 (78%)
Query: 6 RKPILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCN 65
+K I+IDG+GHLLGRLAS+VAK++L+G ++VVVR E LNISG RNKLK+ FLN N
Sbjct: 4 KKAIVIDGKGHLLGRLASVVAKSLLSGQKIVVVRCEELNISGPLSRNKLKWADFLNLTMN 63
Query: 66 VNPARGPFHYRAPARIFWK 84
N ARG H R+P++IFW+
Sbjct: 64 TNHARGHRHGRSPSKIFWR 82
>GENEDB_PFALCIPARUM|PF10_0043 [details] [associations]
symbol:PF10_0043 "ribosomal protein L13,
putative" species:5833 "Plasmodium falciparum" [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS]
InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023564
Pfam:PF00572 PIRSF:PIRSF002181 GO:GO:0006412 GO:GO:0003735
EMBL:AE014185 GO:GO:0022625 HOGENOM:HOG000225289 KO:K02872
Gene3D:3.90.1180.10 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
SUPFAM:SSF52161 TIGRFAMs:TIGR01077 HSSP:O59300 ProtClustDB:PTZ00068
RefSeq:XP_001347328.1 ProteinModelPortal:Q8IJZ7 SMR:Q8IJZ7
IntAct:Q8IJZ7 MINT:MINT-1665265 PRIDE:Q8IJZ7
EnsemblProtists:PF10_0043:mRNA GeneID:810201 KEGG:pfa:PF10_0043
EuPathDB:PlasmoDB:PF3D7_1004000 OMA:VAVRCED Uniprot:Q8IJZ7
Length = 202
Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
Identities = 79/152 (51%), Positives = 106/152 (69%)
Query: 83 WKTPILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRC 142
+K +ID +GHLLGRLAS++AK +LNG R+V VR E +NISG+ +RNKLKY FL R
Sbjct: 2 YKKEYVIDCKGHLLGRLASLIAKELLNGQRIVAVRCEDINISGSLYRNKLKYQEFLRLRT 61
Query: 143 NVNPARGPFHYRAPARIFWKTVRGMTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPT 202
N NP +GP H R P++I W+ VRGM PHK +G ALK+LKV G+P Y ++++ +P+
Sbjct: 62 NTNPKKGPLHLREPSKILWRCVRGMLPHKTYKGQLALKKLKVCVGMPYPYDKKKKYVLPS 121
Query: 203 ALRTVCLKPGRSYCSVGRISHEVGWKYKTIVR 234
ALR LK R YC +G +S VGW Y T+V+
Sbjct: 122 ALRAFRLKKHRRYCRLGTLSSRVGWNYDTLVK 153
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 45/79 (56%), Positives = 59/79 (74%)
Query: 6 RKPILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCN 65
+K +ID +GHLLGRLAS++AK +LNG R+V VR E +NISG+ +RNKLKY FL R N
Sbjct: 3 KKEYVIDCKGHLLGRLASLIAKELLNGQRIVAVRCEDINISGSLYRNKLKYQEFLRLRTN 62
Query: 66 VNPARGPFHYRAPARIFWK 84
NP +GP H R P++I W+
Sbjct: 63 TNPKKGPLHLREPSKILWR 81
>UNIPROTKB|Q8IJZ7 [details] [associations]
symbol:PF10_0043 "60S ribosomal protein L13, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISS] InterPro:IPR005755
InterPro:IPR005822 InterPro:IPR023564 Pfam:PF00572
PIRSF:PIRSF002181 GO:GO:0006412 GO:GO:0003735 EMBL:AE014185
GO:GO:0022625 HOGENOM:HOG000225289 KO:K02872 Gene3D:3.90.1180.10
PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
TIGRFAMs:TIGR01077 HSSP:O59300 ProtClustDB:PTZ00068
RefSeq:XP_001347328.1 ProteinModelPortal:Q8IJZ7 SMR:Q8IJZ7
IntAct:Q8IJZ7 MINT:MINT-1665265 PRIDE:Q8IJZ7
EnsemblProtists:PF10_0043:mRNA GeneID:810201 KEGG:pfa:PF10_0043
EuPathDB:PlasmoDB:PF3D7_1004000 OMA:VAVRCED Uniprot:Q8IJZ7
Length = 202
Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
Identities = 79/152 (51%), Positives = 106/152 (69%)
Query: 83 WKTPILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRC 142
+K +ID +GHLLGRLAS++AK +LNG R+V VR E +NISG+ +RNKLKY FL R
Sbjct: 2 YKKEYVIDCKGHLLGRLASLIAKELLNGQRIVAVRCEDINISGSLYRNKLKYQEFLRLRT 61
Query: 143 NVNPARGPFHYRAPARIFWKTVRGMTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPT 202
N NP +GP H R P++I W+ VRGM PHK +G ALK+LKV G+P Y ++++ +P+
Sbjct: 62 NTNPKKGPLHLREPSKILWRCVRGMLPHKTYKGQLALKKLKVCVGMPYPYDKKKKYVLPS 121
Query: 203 ALRTVCLKPGRSYCSVGRISHEVGWKYKTIVR 234
ALR LK R YC +G +S VGW Y T+V+
Sbjct: 122 ALRAFRLKKHRRYCRLGTLSSRVGWNYDTLVK 153
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 45/79 (56%), Positives = 59/79 (74%)
Query: 6 RKPILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCN 65
+K +ID +GHLLGRLAS++AK +LNG R+V VR E +NISG+ +RNKLKY FL R N
Sbjct: 3 KKEYVIDCKGHLLGRLASLIAKELLNGQRIVAVRCEDINISGSLYRNKLKYQEFLRLRTN 62
Query: 66 VNPARGPFHYRAPARIFWK 84
NP +GP H R P++I W+
Sbjct: 63 TNPKKGPLHLREPSKILWR 81
>UNIPROTKB|G3MXM1 [details] [associations]
symbol:G3MXM1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0015934 "large ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR005755
InterPro:IPR005822 InterPro:IPR023564 Pfam:PF00572 GO:GO:0006412
GO:GO:0003735 GO:GO:0015934 Gene3D:3.90.1180.10 PANTHER:PTHR11545
PANTHER:PTHR11545:SF3 SUPFAM:SSF52161 TIGRFAMs:TIGR01077
GeneTree:ENSGT00390000010799 EMBL:DAAA02019350
Ensembl:ENSBTAT00000064024 Uniprot:G3MXM1
Length = 193
Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 79/150 (52%), Positives = 107/150 (71%)
Query: 87 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 146
+++DG+GHLLGRL +IVAK +L G + VVVR E +NISGNF+RNKLKYLAF KR N NP
Sbjct: 7 LVLDGQGHLLGRLEAIVAKQMLLGRKGVVVRCEGINISGNFYRNKLKYLAFFRKRMNTNP 66
Query: 147 ARGPFHYRAPARIFWKTVRGMTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRT 206
+R P+H RAP+ IFW+T G G AL+ L+V++GIPP Y +R+R+ VP AL+
Sbjct: 67 SRDPYHLRAPSGIFWRT--G--------GQAALEHLEVFDGIPPTYNKRKRMVVPAALKV 116
Query: 207 VCLKPGRSYCSVGRISHEVGWKYKTIVRHL 236
V LKP R + +GR++HE+GW + + L
Sbjct: 117 VRLKPTRKFAYLGRLAHEIGWTDQAVTATL 146
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 50/77 (64%), Positives = 63/77 (81%)
Query: 9 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 68
+++DG+GHLLGRL +IVAK +L G + VVVR E +NISGNF+RNKLKYLAF KR N NP
Sbjct: 7 LVLDGQGHLLGRLEAIVAKQMLLGRKGVVVRCEGINISGNFYRNKLKYLAFFRKRMNTNP 66
Query: 69 ARGPFHYRAPARIFWKT 85
+R P+H RAP+ IFW+T
Sbjct: 67 SRDPYHLRAPSGIFWRT 83
>UNIPROTKB|I3LN23 [details] [associations]
symbol:I3LN23 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015934 "large ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR005755
InterPro:IPR005822 InterPro:IPR023564 Pfam:PF00572 GO:GO:0006412
GO:GO:0003735 GO:GO:0015934 Gene3D:3.90.1180.10 PANTHER:PTHR11545
PANTHER:PTHR11545:SF3 SUPFAM:SSF52161 TIGRFAMs:TIGR01077
GeneTree:ENSGT00390000010799 Ensembl:ENSSSCT00000030341
Uniprot:I3LN23
Length = 207
Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 77/147 (52%), Positives = 103/147 (70%)
Query: 87 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 146
+++DGRGHLLGRLA+IVAK +L G +VVVVR E +NISGNF+RNKLKYLAFL KR N NP
Sbjct: 8 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 67
Query: 147 ARGPFHYRAPARIFWKTVRGMTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRT 206
+RGP+H+RAP+RIFW+T P + L+R +PP + ++R+ VP AL+
Sbjct: 68 SRGPYHFRAPSRIFWRTSEAQLPQQQQPW---LQRPPALASLPPCLSLKKRMVVPAALKV 124
Query: 207 VCLKP---GRSYCSVGRISHEVGWKYK 230
V P + +GR++HEVGWKY+
Sbjct: 125 VRFAPPFPSPQFAYLGRLAHEVGWKYQ 151
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 56/77 (72%), Positives = 69/77 (89%)
Query: 9 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 68
+++DGRGHLLGRLA+IVAK +L G +VVVVR E +NISGNF+RNKLKYLAFL KR N NP
Sbjct: 8 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNP 67
Query: 69 ARGPFHYRAPARIFWKT 85
+RGP+H+RAP+RIFW+T
Sbjct: 68 SRGPYHFRAPSRIFWRT 84
>UNIPROTKB|I3L8K3 [details] [associations]
symbol:I3L8K3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023564
Pfam:PF00572 GO:GO:0006412 GO:GO:0003735 GO:GO:0015934
Gene3D:3.90.1180.10 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
SUPFAM:SSF52161 TIGRFAMs:TIGR01077 GeneTree:ENSGT00390000010799
Ensembl:ENSSSCT00000026257 OMA:RINTNGA Uniprot:I3L8K3
Length = 195
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 70/146 (47%), Positives = 94/146 (64%)
Query: 87 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 146
++ D RGH LG L +I K +L G +V+VVR E +NISGN +RNK KYLAFL+KR N N
Sbjct: 8 LMQDVRGHFLGCLVAIAPKQVLLGQKVMVVRCEGINISGNIYRNKPKYLAFLHKRINTNG 67
Query: 147 ARGPFHYRAPARIFWKTVRGMTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRT 206
AR + IFW+TVR HK G L LKV++ IPP Y +++R+ +P AL+
Sbjct: 68 AR--------SCIFWRTVRHPA-HKTRGGQATLDHLKVFDEIPPPYDKKKRMMIPAALKV 118
Query: 207 VCLKPGRSYCSVGRISHEVGWKYKTI 232
V LKP R + +G +++EVGWKY I
Sbjct: 119 VRLKPMRKFAYLGCLAYEVGWKYHAI 144
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 38/74 (51%), Positives = 50/74 (67%)
Query: 4 ISRKPILI-DGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNK 62
+ + +L+ D RGH LG L +I K +L G +V+VVR E +NISGN +RNK KYLAFL+K
Sbjct: 2 VEEQQVLMQDVRGHFLGCLVAIAPKQVLLGQKVMVVRCEGINISGNIYRNKPKYLAFLHK 61
Query: 63 RCNVNPARGPFHYR 76
R N N AR +R
Sbjct: 62 RINTNGARSCIFWR 75
>UNIPROTKB|F1RU15 [details] [associations]
symbol:F1RU15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015934 "large ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR005755
InterPro:IPR005822 InterPro:IPR023564 Pfam:PF00572 GO:GO:0006412
GO:GO:0003735 GO:GO:0015934 Gene3D:3.90.1180.10 PANTHER:PTHR11545
PANTHER:PTHR11545:SF3 SUPFAM:SSF52161 TIGRFAMs:TIGR01077
GeneTree:ENSGT00390000010799 EMBL:CU856129
Ensembl:ENSSSCT00000014185 Uniprot:F1RU15
Length = 173
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 61/115 (53%), Positives = 79/115 (68%)
Query: 97 GRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNPARGPFHYRAP 156
GR VAK +L G +VVVVR E +NISGNF+RNKLKY+AF K+ N NP+ P +RAP
Sbjct: 1 GRCWGSVAKQVLLGWKVVVVRCEGINISGNFYRNKLKYVAFFRKQINTNPSHSPDPFRAP 60
Query: 157 ARIFWKTVRGMTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRTVCLKP 211
RIFW+ +RG+ HK R AL LKV++G PP +++R+ VP AL+ V LKP
Sbjct: 61 -RIFWRPMRGLLLHKTKRSQAALD-LKVFDGKPPPNDKKKRMVVPGALKVVPLKP 113
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 39/66 (59%), Positives = 48/66 (72%)
Query: 19 GRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNPARGPFHYRAP 78
GR VAK +L G +VVVVR E +NISGNF+RNKLKY+AF K+ N NP+ P +RAP
Sbjct: 1 GRCWGSVAKQVLLGWKVVVVRCEGINISGNFYRNKLKYVAFFRKQINTNPSHSPDPFRAP 60
Query: 79 ARIFWK 84
RIFW+
Sbjct: 61 -RIFWR 65
>UNIPROTKB|J9P546 [details] [associations]
symbol:J9P546 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015934 "large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023564
Pfam:PF00572 GO:GO:0006412 GO:GO:0003735 GO:GO:0015934
Gene3D:3.90.1180.10 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
SUPFAM:SSF52161 GeneTree:ENSGT00390000010799 EMBL:AAEX03011787
Ensembl:ENSCAFT00000006345 Uniprot:J9P546
Length = 189
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 59/146 (40%), Positives = 90/146 (61%)
Query: 87 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 146
+++ G+GHLLG L ++VAK + G +V+VV E +NISGNF+R+KL +LAFL+K+ P
Sbjct: 9 LVLYGQGHLLGSLVAVVAKQVPLGQKVIVVCCEGINISGNFYRHKL-FLAFLHKQ----P 63
Query: 147 ARGPFHYRAPARIFWKTVRGMTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRT 206
P R P+ IFW TV GM P+K +G L L+ ++ I P Y ++++ P A +
Sbjct: 64 M-APITSRMPSHIFWWTVEGMLPNKTKQGQTFLDCLR-FDRILPPYNMKKQMVAPDAFKV 121
Query: 207 VCLKPGRSYCSVGRISHEVGWKYKTI 232
V K R +G ++H GWKY+ +
Sbjct: 122 VQPKTTRKLTQLGYLAH-AGWKYQAV 146
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 37/77 (48%), Positives = 53/77 (68%)
Query: 9 ILIDGRGHLLGRLASIVAKTILNGNRVVVVRAELLNISGNFFRNKLKYLAFLNKRCNVNP 68
+++ G+GHLLG L ++VAK + G +V+VV E +NISGNF+R+KL +LAFL+K+ P
Sbjct: 9 LVLYGQGHLLGSLVAVVAKQVPLGQKVIVVCCEGINISGNFYRHKL-FLAFLHKQ----P 63
Query: 69 ARGPFHYRAPARIFWKT 85
P R P+ IFW T
Sbjct: 64 M-APITSRMPSHIFWWT 79
>UNIPROTKB|E2QS54 [details] [associations]
symbol:E2QS54 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015934 "large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023564
GO:GO:0006412 GO:GO:0003735 GO:GO:0015934 Gene3D:3.90.1180.10
PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
Ensembl:ENSCAFT00000032205 Uniprot:E2QS54
Length = 99
Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 35/70 (50%), Positives = 49/70 (70%)
Query: 167 MTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRTVCLKPGRSYCSVGRISHEVG 226
M PHK +G AL RLKV++GIPP Y ++Q + VP AL+ V LKP R + +GR++H+VG
Sbjct: 1 MLPHKT-KGQAALDRLKVFDGIPPPYNKKQ-MVVPAALKVVRLKPTRKFAYLGRLAHKVG 58
Query: 227 WKYKTIVRHL 236
WKY+ + L
Sbjct: 59 WKYQAVTATL 68
>UNIPROTKB|Q6NVV1 [details] [associations]
symbol:Q6NVV1 "Putative 60S ribosomal protein L13a-like
MGC87657" species:9606 "Homo sapiens" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0015934 "large ribosomal subunit" evidence=IEA]
InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023564
PROSITE:PS00783 GO:GO:0006412 GO:GO:0003735 GO:GO:0015934
eggNOG:COG0102 Gene3D:3.90.1180.10 PANTHER:PTHR11545
PANTHER:PTHR11545:SF3 SUPFAM:SSF52161 EMBL:BC067891 IPI:IPI00432865
UniGene:Hs.663461 ProteinModelPortal:Q6NVV1 SMR:Q6NVV1
IntAct:Q6NVV1 STRING:Q6NVV1 PaxDb:Q6NVV1 PRIDE:Q6NVV1
neXtProt:NX_Q6NVV1 HOVERGEN:HBG062176 InParanoid:Q6NVV1
Genevestigator:Q6NVV1 Uniprot:Q6NVV1
Length = 102
Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 32/70 (45%), Positives = 45/70 (64%)
Query: 167 MTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRTVCLKPGRSYCSVGRISHEVG 226
M HK RG +L LKV++GIPP Y +++R+ VP AL+ V LKP R + +GR + EV
Sbjct: 1 MLRHKTKRGHASLDCLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFALLGRQAQEVR 60
Query: 227 WKYKTIVRHL 236
WKY+ + L
Sbjct: 61 WKYQAVTATL 70
>UNIPROTKB|F6UMX6 [details] [associations]
symbol:F6UMX6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015934 "large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR005755 InterPro:IPR005822 GO:GO:0006412 GO:GO:0003735
GO:GO:0015934 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
GeneTree:ENSGT00390000010799 Ensembl:ENSCAFT00000032205
EMBL:AAEX03013124 OMA:MAEGQXD Uniprot:F6UMX6
Length = 86
Score = 101 (40.6 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 198 LCVPTALRTVCLKPGRSYCSVGRISHEVGWKYKTIVRHL 236
+ VP AL+ V LKP R + +G ++HEVGWKY+ + L
Sbjct: 1 MVVPAALKVVRLKPTRKFAYLGCLAHEVGWKYQAVTATL 39
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.328 0.143 0.450 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 255 242 0.00096 113 3 11 22 0.49 32
32 0.45 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 38
No. of states in DFA: 566 (60 KB)
Total size of DFA: 172 KB (2099 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.95u 0.09s 20.04t Elapsed: 00:00:28
Total cpu time: 19.95u 0.09s 20.04t Elapsed: 00:00:28
Start: Thu Aug 15 13:56:39 2013 End: Thu Aug 15 13:57:07 2013