BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9433
(105 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|195452088|ref|XP_002073207.1| GK13274 [Drosophila willistoni]
gi|194169292|gb|EDW84193.1| GK13274 [Drosophila willistoni]
Length = 174
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 79/107 (73%), Gaps = 2/107 (1%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+TS+LSITHRGTG+AL +ALGL + + DI+ V+ V+ L LS L A KFI+A+
Sbjct: 68 LTSILSITHRGTGMALGVGVWALGLGALISSHDISHYVTIVEGLQLSDAQLTAIKFIIAY 127
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
P +HTANGIRHL+WDTGR L IK+VY+TGYAML A+ + + +L LL
Sbjct: 128 PAGFHTANGIRHLLWDTGRFLKIKEVYSTGYAMLAASFVLSGILALL 174
>gi|194743886|ref|XP_001954429.1| GF18258 [Drosophila ananassae]
gi|190627466|gb|EDV42990.1| GF18258 [Drosophila ananassae]
Length = 152
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 77/107 (71%), Gaps = 2/107 (1%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+TS+LSI HRGTG+AL A +ALG+ + + DIN + V+ L LS L A KFI+A+
Sbjct: 46 LTSMLSIMHRGTGLALGAGVWALGVGALISSHDINHYATMVEGLQLSGATLTALKFIIAY 105
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
PV YHTANGIRHL+WDTGR L IK+VY+TGYAM+ + + +L LL
Sbjct: 106 PVGYHTANGIRHLLWDTGRFLKIKEVYSTGYAMVATSFILTAILALL 152
>gi|195038233|ref|XP_001990564.1| GH19420 [Drosophila grimshawi]
gi|193894760|gb|EDV93626.1| GH19420 [Drosophila grimshawi]
Length = 171
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 77/107 (71%), Gaps = 2/107 (1%)
Query: 1 ITSVLSITHRGTGVALT--AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+TS+LSI HRGTG+AL + LGL + + DI+ V+ V+ L LS L A KFI+A+
Sbjct: 65 LTSMLSIMHRGTGLALGMGVWGLGLGALIASQDISHYVTMVEGLQLSGATLTAIKFIIAY 124
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
PV YH+ANGIRHL+WDTGR L IK+VY+TGYAM+ A+ + +L LL
Sbjct: 125 PVGYHSANGIRHLLWDTGRFLKIKEVYSTGYAMVAASFVLTAILALL 171
>gi|390179514|ref|XP_003736918.1| GA19764 [Drosophila pseudoobscura pseudoobscura]
gi|388859883|gb|EIM52991.1| GA19764 [Drosophila pseudoobscura pseudoobscura]
Length = 171
Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 76/107 (71%), Gaps = 2/107 (1%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+TS+LS+ HRGTG+AL +ALGL + + DI+ V+ V+ L LS L A KFI+A+
Sbjct: 65 LTSILSVMHRGTGMALGVGVWALGLGALISSHDISHYVTMVEGLQLSGATLTALKFIIAY 124
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
P YHTANGIRHL WDTGR L IK+VY+TGYAM+ A+ + +L L+
Sbjct: 125 PAGYHTANGIRHLFWDTGRFLKIKEVYSTGYAMVAASFVLTAILALI 171
>gi|195157732|ref|XP_002019750.1| GL12041 [Drosophila persimilis]
gi|194116341|gb|EDW38384.1| GL12041 [Drosophila persimilis]
Length = 152
Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 76/107 (71%), Gaps = 2/107 (1%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+TS+LS+ HRGTG+AL +ALGL + + DI+ V+ V+ L LS L A KFI+A+
Sbjct: 46 LTSILSVMHRGTGMALGVGVWALGLGALISSHDISHYVTMVEGLQLSGATLTALKFIIAY 105
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
P YHTANGIRHL WDTGR L IK+VY+TGYAM+ A+ + +L L+
Sbjct: 106 PAGYHTANGIRHLFWDTGRFLKIKEVYSTGYAMVAASFVLTAILALI 152
>gi|195389516|ref|XP_002053422.1| GJ23871 [Drosophila virilis]
gi|194151508|gb|EDW66942.1| GJ23871 [Drosophila virilis]
Length = 170
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 75/107 (70%), Gaps = 2/107 (1%)
Query: 1 ITSVLSITHRGTGVALT--AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+TS+LSI HRGTG+AL + LGL + + DI V+ V+ L LS L A KFI+A+
Sbjct: 64 LTSMLSIMHRGTGLALGIGVWGLGLGALIASQDIGHYVTMVEGLQLSGAALTAIKFIIAY 123
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
PV YH+ANGIRHLIWDTGR L IK+VY+TGY M+ +++ +L LL
Sbjct: 124 PVGYHSANGIRHLIWDTGRFLKIKEVYSTGYVMVATSVVLTAILALL 170
>gi|289742767|gb|ADD20131.1| succinate dehydrogenase cytochrome b subunit [Glossina morsitans
morsitans]
Length = 173
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 73/99 (73%), Gaps = 2/99 (2%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+TS+LS+THRGTG+ LTA +ALGLA + DI + S ++ L+L L KF+ AF
Sbjct: 67 LTSLLSVTHRGTGMVLTAGVWALGLAALISPQDIGNYASVIEGLHLGGGTLTVLKFMFAF 126
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAIL 97
P+++HTANG+RHL+WDTGR L IK+VY+TGY M+G + +
Sbjct: 127 PLAFHTANGVRHLLWDTGRFLKIKEVYSTGYVMVGMSFV 165
>gi|289742765|gb|ADD20130.1| succinate dehydrogenase cytochrome b subunit [Glossina morsitans
morsitans]
Length = 173
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 77/107 (71%), Gaps = 2/107 (1%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+TS+LS+THRGTG+ LTA +ALGLA + DI + S ++ L+L L KF+ AF
Sbjct: 67 LTSLLSVTHRGTGMVLTAGVWALGLAALISPQDIGNYASVIEGLHLGGGTLTFLKFMFAF 126
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
P+++HTANG+RHL+WDTGR L IK+VY+TGY M+G + + +L ++
Sbjct: 127 PLAFHTANGVRHLLWDTGRFLKIKEVYSTGYVMVGTSFVLAAMLAMI 173
>gi|21064663|gb|AAM29561.1| RH04289p [Drosophila melanogaster]
Length = 171
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 74/107 (69%), Gaps = 2/107 (1%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTT--DINSVVSFVDALNLSAPILLAGKFILAF 58
+TS+LSI HRGTG+AL GL L + DI+ V+ V+ L LS L A KFI+A+
Sbjct: 65 LTSMLSICHRGTGLALGVGVWGLGLGALISSHDISHYVTMVEGLQLSGATLTALKFIIAY 124
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
P YHTANGIRHL+WDTGR L IK+VY+TGYAM+ + + + +L LL
Sbjct: 125 PAGYHTANGIRHLLWDTGRFLKIKEVYSTGYAMVATSFVLSAILALL 171
>gi|45550736|ref|NP_650047.3| succinate dehydrogenase C, isoform A [Drosophila melanogaster]
gi|442618548|ref|NP_001262472.1| succinate dehydrogenase C, isoform B [Drosophila melanogaster]
gi|195329931|ref|XP_002031662.1| GM26120 [Drosophila sechellia]
gi|17946639|gb|AAL49350.1| RH44771p [Drosophila melanogaster]
gi|45446453|gb|AAF54602.2| succinate dehydrogenase C, isoform A [Drosophila melanogaster]
gi|194120605|gb|EDW42648.1| GM26120 [Drosophila sechellia]
gi|440217315|gb|AGB95854.1| succinate dehydrogenase C, isoform B [Drosophila melanogaster]
Length = 171
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 74/107 (69%), Gaps = 2/107 (1%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTT--DINSVVSFVDALNLSAPILLAGKFILAF 58
+TS+LSI HRGTG+AL GL L + DI+ V+ V+ L LS L A KFI+A+
Sbjct: 65 LTSMLSICHRGTGLALGVGVWGLGLGALISSHDISHYVTMVEGLQLSGATLTALKFIIAY 124
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
P YHTANGIRHL+WDTGR L IK+VY+TGYAM+ + + + +L LL
Sbjct: 125 PAGYHTANGIRHLLWDTGRFLKIKEVYSTGYAMVATSFVLSAILALL 171
>gi|195499973|ref|XP_002097176.1| GE24640 [Drosophila yakuba]
gi|194183277|gb|EDW96888.1| GE24640 [Drosophila yakuba]
Length = 171
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 74/107 (69%), Gaps = 2/107 (1%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTT--DINSVVSFVDALNLSAPILLAGKFILAF 58
+TS+LSI HRGTG+AL GL L + DI+ V+ V+ L LS L A KFI+A+
Sbjct: 65 LTSMLSICHRGTGLALGVGVWGLGLGALISSHDISHYVTMVEGLQLSGATLTALKFIIAY 124
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
P YHTANGIRHL+WDTGR L IK+VY+TGYAM+ + + + +L LL
Sbjct: 125 PAGYHTANGIRHLLWDTGRFLKIKEVYSTGYAMVATSFVLSAILALL 171
>gi|118781278|ref|XP_311387.3| AGAP010672-PA [Anopheles gambiae str. PEST]
gi|116130095|gb|EAA07051.3| AGAP010672-PA [Anopheles gambiae str. PEST]
Length = 175
Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 69/95 (72%), Gaps = 4/95 (4%)
Query: 1 ITSVLSITHRGTGVALTAY--ALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+TS+LSITHR TG+ALT Y ALGL + + D ++ ++ L SAP L+A KF +A+
Sbjct: 71 LTSMLSITHRFTGLALTGYITALGLGALAMPHDATHYLTMLEGL--SAPTLIALKFTMAY 128
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLG 93
P +YHT NG+RHL WD G+ LTIK+VYTTGY MLG
Sbjct: 129 PFAYHTVNGVRHLFWDMGKFLTIKEVYTTGYTMLG 163
>gi|195571827|ref|XP_002103902.1| GD20679 [Drosophila simulans]
gi|194199829|gb|EDX13405.1| GD20679 [Drosophila simulans]
Length = 152
Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 74/107 (69%), Gaps = 2/107 (1%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTT--DINSVVSFVDALNLSAPILLAGKFILAF 58
+TS+LSI HRGTG+AL GL L + DI+ V+ V+ L LS L A KFI+A+
Sbjct: 46 LTSMLSICHRGTGLALGVGVWGLGLGALISSHDISHYVTMVEGLQLSGATLTALKFIIAY 105
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
P YHTANGIRHL+WDTGR L IK+VY+TGYAM+ + + + +L LL
Sbjct: 106 PAGYHTANGIRHLLWDTGRFLKIKEVYSTGYAMVATSFVLSAILALL 152
>gi|38048273|gb|AAR10039.1| similar to Drosophila melanogaster CG6666, partial [Drosophila
yakuba]
Length = 152
Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 74/107 (69%), Gaps = 2/107 (1%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTT--DINSVVSFVDALNLSAPILLAGKFILAF 58
+TS+LSI HRGTG+AL GL L + DI+ V+ V+ L LS L A KFI+A+
Sbjct: 46 LTSMLSICHRGTGLALGVGVWGLGLGALISSHDISHYVTMVEGLQLSGATLTALKFIIAY 105
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
P YHTANGIRHL+WDTGR L IK+VY+TGYAM+ + + + +L LL
Sbjct: 106 PAGYHTANGIRHLLWDTGRFLKIKEVYSTGYAMVATSFVLSAILALL 152
>gi|194902122|ref|XP_001980598.1| GG17240 [Drosophila erecta]
gi|190652301|gb|EDV49556.1| GG17240 [Drosophila erecta]
Length = 152
Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 74/107 (69%), Gaps = 2/107 (1%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTT--DINSVVSFVDALNLSAPILLAGKFILAF 58
+TS+LSI HRGTG+AL GL L + DI+ V+ V+ L LS L A KFI+A+
Sbjct: 46 LTSMLSICHRGTGLALGVGVWGLGLGALISSHDISHYVTMVEGLQLSGATLTALKFIIAY 105
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
P YHTANGIRHL+WDTGR L IK+VY+TGYAM+ + + + +L LL
Sbjct: 106 PAGYHTANGIRHLLWDTGRFLKIKEVYSTGYAMVATSFVLSAILALL 152
>gi|312375419|gb|EFR22798.1| hypothetical protein AND_14194 [Anopheles darlingi]
Length = 192
Score = 104 bits (259), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 70/97 (72%), Gaps = 4/97 (4%)
Query: 1 ITSVLSITHRGTGVALTAY--ALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+TS LSITHR TG+ALT Y ALGL + + D ++ ++ L SAP L+A KF+LA+
Sbjct: 74 LTSTLSITHRFTGLALTGYITALGLGALVMPHDATHYLTMLEGL--SAPTLIALKFMLAY 131
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAA 95
P +YHT NG+RHL WD G+ LTIK+VYTTGY MLG +
Sbjct: 132 PFAYHTVNGVRHLFWDMGKFLTIKEVYTTGYTMLGVS 168
>gi|195111370|ref|XP_002000252.1| GI22625 [Drosophila mojavensis]
gi|193916846|gb|EDW15713.1| GI22625 [Drosophila mojavensis]
Length = 152
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 72/107 (67%), Gaps = 2/107 (1%)
Query: 1 ITSVLSITHRGTGV--ALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+TS+LS+ HRGTG+ L + LG+ + + DI+ V+ V+ L LS L A KFILA+
Sbjct: 46 LTSLLSVMHRGTGLVLGLGVWGLGIGALVASQDISHYVTMVEGLQLSGASLTAIKFILAY 105
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
P YH ANG+RHL+WDTGR L IK+VY+TGY M+ + + +L LL
Sbjct: 106 PFGYHAANGVRHLLWDTGRFLKIKEVYSTGYVMVATSFVLTAILALL 152
>gi|240848787|ref|NP_001155673.1| succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like
[Acyrthosiphon pisum]
gi|239788025|dbj|BAH70709.1| ACYPI006695 [Acyrthosiphon pisum]
Length = 175
Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 73/103 (70%), Gaps = 1/103 (0%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPV 60
+T++LSITHRGTGVAL+ GL + + TD+ + V FV L L + +++ K ++A+P
Sbjct: 69 LTTILSITHRGTGVALSGVTAGLGALFIFTDLPTFVQFVHGLELPSAAIMSAKGLVAYPF 128
Query: 61 SYHTANGIRHLIWDTGRALTIKKVYTTGYAML-GAAILTNLVL 102
YH NGIRHL+WD G+ LTIK+VY+TGY ++ G+ +LT L L
Sbjct: 129 FYHLCNGIRHLVWDAGKCLTIKQVYSTGYGVIVGSLLLTVLSL 171
>gi|170050185|ref|XP_001859594.1| mitochondrial succinate dehydrogenase cytochrome b subunit [Culex
quinquefasciatus]
gi|167871715|gb|EDS35098.1| mitochondrial succinate dehydrogenase cytochrome b subunit [Culex
quinquefasciatus]
Length = 171
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 67/94 (71%), Gaps = 4/94 (4%)
Query: 1 ITSVLSITHRGTGVALTAYA--LGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+T+VLSITHR TG+AL YA LGL + + D ++ ++ LSAP L+A KF +A+
Sbjct: 67 LTAVLSITHRMTGMALAGYATALGLGALAMPHDATHYLTMLE--GLSAPTLMALKFTMAY 124
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAML 92
P SYHT NG+RHL WD G+ L+IK+VYTTGY ML
Sbjct: 125 PFSYHTVNGVRHLFWDLGKFLSIKEVYTTGYTML 158
>gi|389610213|dbj|BAM18718.1| succinate dehydrogenase C [Papilio xuthus]
Length = 180
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 69/107 (64%), Gaps = 2/107 (1%)
Query: 1 ITSVLSITHRGTGVALTAYA--LGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+TS+LSITHR G+ L+ YA LG+ + L D++ + ++ LNLS + KF++A
Sbjct: 74 LTSILSITHRTAGIILSGYASVLGIGALVLPHDVSHYIMMIEGLNLSPATIFLAKFLIAA 133
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
P YH ANG+RHL WDT + LTIK+VY+TGYAML A L L L
Sbjct: 134 PFGYHFANGLRHLYWDTAKGLTIKEVYSTGYAMLATATAITLFLAAL 180
>gi|157120010|ref|XP_001653486.1| succinate dehydrogenase [Aedes aegypti]
gi|94468558|gb|ABF18128.1| mitochondrial succinate dehydrogenase cytochrome b subunit [Aedes
aegypti]
gi|108875100|gb|EAT39325.1| AAEL008871-PA [Aedes aegypti]
Length = 171
Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/94 (52%), Positives = 67/94 (71%), Gaps = 4/94 (4%)
Query: 1 ITSVLSITHRGTGVALTAYA--LGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+TS+LSITHR TG+AL YA +GL + L D ++ ++ L SAP L+A KF LA+
Sbjct: 67 LTSMLSITHRMTGMALAGYATMMGLGALALPHDATHYLTMLEGL--SAPTLMALKFTLAY 124
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAML 92
P ++H+ NG+RHL WD G+ LTIK+VY+TGY ML
Sbjct: 125 PFAFHSVNGVRHLFWDMGKFLTIKEVYSTGYTML 158
>gi|357630734|gb|EHJ78667.1| hypothetical protein KGM_04144 [Danaus plexippus]
Length = 180
Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 70/101 (69%), Gaps = 3/101 (2%)
Query: 1 ITSVLSITHRGTGVALTAYA--LGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+TS+LSI+HR G+ L+ YA LG+ + L DI+ ++ ++ LNLS L K ++A
Sbjct: 74 LTSILSISHRFAGMILSGYATALGVGALVLPNDISHYITMIEGLNLSPATLFIAKVLIAA 133
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAML-GAAILT 98
P YH ANGIRHL WDT + L+IK+VY+TGY ML GAA+LT
Sbjct: 134 PFGYHFANGIRHLYWDTAKGLSIKEVYSTGYTMLAGAAVLT 174
>gi|91077182|ref|XP_972413.1| PREDICTED: similar to succinate dehydrogenase [Tribolium castaneum]
gi|270002816|gb|EEZ99263.1| hypothetical protein TcasGA2_TC000992 [Tribolium castaneum]
Length = 173
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 70/106 (66%), Gaps = 4/106 (3%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALN---LSAPILLAGKFILA 57
+TS+LSITHR TG+ L YA+ + G G +++ ++DAL + +L GKF+LA
Sbjct: 67 LTSMLSITHRATGMMLAGYAI-MWGTGAVVLPDTIPHYLDALQQAHVGGFVLSMGKFMLA 125
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLT 103
FP+ YH NGIRHL WD GR LTIK+VY TGYAML + + + LT
Sbjct: 126 FPMCYHFWNGIRHLAWDLGRFLTIKEVYATGYAMLALTVASAIALT 171
>gi|307188808|gb|EFN73391.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
[Camponotus floridanus]
Length = 152
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 69/104 (66%), Gaps = 2/104 (1%)
Query: 1 ITSVLSITHRGTGVALTAYA--LGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+TSVLS+THR TG+ L +YA LGL + + I + VD L L P+L GK +LA
Sbjct: 46 LTSVLSVTHRTTGIMLASYAMFLGLGTLLIPGGIPCFIETVDNLCLPLPVLYIGKLLLAL 105
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
P +YHT NG+RHL WD G+ LTIK+VY+TGY + A+++ L L
Sbjct: 106 PATYHTFNGMRHLAWDFGKFLTIKEVYSTGYLVSALAVISALAL 149
>gi|332020713|gb|EGI61118.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
[Acromyrmex echinatior]
Length = 154
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 71/104 (68%), Gaps = 2/104 (1%)
Query: 1 ITSVLSITHRGTGVALTAYA--LGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+T++LSITHR TG+ L++YA LGL + + I + +D L L PIL GK +LA
Sbjct: 48 LTTLLSITHRTTGIILSSYAMFLGLGTLLIPGGIPCFIETMDNLCLPLPILFVGKTLLAL 107
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
P ++HT NGIRHL+WD G LTIK+VY+TGY + A+++ L+L
Sbjct: 108 PATFHTYNGIRHLLWDLGMFLTIKEVYSTGYMVSAMAVVSALIL 151
>gi|322794003|gb|EFZ17241.1| hypothetical protein SINV_07470 [Solenopsis invicta]
Length = 148
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 67/104 (64%), Gaps = 2/104 (1%)
Query: 1 ITSVLSITHRGTGVALTAYA--LGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+T+VLSITHR TG+ L +YA LGL + + I + VD L L P+L AGK +LA
Sbjct: 42 LTTVLSITHRTTGIMLASYAMFLGLGTLFIPGGIPCFIETVDNLCLPLPVLFAGKTLLAL 101
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
P +YH NGIRHL WD G L+IK VY+TGY + A+++ L L
Sbjct: 102 PATYHLFNGIRHLAWDLGMFLSIKDVYSTGYVVSALAVISGLAL 145
>gi|380021914|ref|XP_003694801.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like [Apis florea]
Length = 175
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 67/96 (69%), Gaps = 4/96 (4%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVG---LTTDINSVVSFVDALNLSAPILLAGKFILA 57
+T+ LSITHR TG+ L++YA+ L G+G + I ++ + L LSAP+L GK +LA
Sbjct: 69 LTAFLSITHRTTGMILSSYAM-LFGIGTLLIPGGIPCLIEIITELGLSAPVLFVGKTLLA 127
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLG 93
P +YH NG+RHL WD G LTIK+VY+TGYA++G
Sbjct: 128 LPATYHIFNGLRHLAWDLGMFLTIKEVYSTGYAVIG 163
>gi|340724505|ref|XP_003400622.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like [Bombus terrestris]
Length = 176
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 70/105 (66%), Gaps = 4/105 (3%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVG---LTTDINSVVSFVDALNLSAPILLAGKFILA 57
+TS LSITHR TG+ L++YA+ L G+G + I ++ + L LSAP+L GK +LA
Sbjct: 70 LTSFLSITHRTTGMILSSYAM-LLGIGTLLIPGGIPCLIEIITNLGLSAPVLFTGKTLLA 128
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
P +YH NG RHL WD G L+IK+VY+TGYA++ + ++ + L
Sbjct: 129 LPATYHVFNGFRHLAWDLGMFLSIKEVYSTGYAVIALSTISAIAL 173
>gi|91077184|ref|XP_972464.1| PREDICTED: similar to succinate dehydrogenase [Tribolium castaneum]
gi|270002817|gb|EEZ99264.1| hypothetical protein TcasGA2_TC000993 [Tribolium castaneum]
Length = 172
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 72/107 (67%), Gaps = 2/107 (1%)
Query: 1 ITSVLSITHRGTGVALTAY--ALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+TS+LSI+HR TG+ LT Y LG + L I + ++ ++ ++ +L GKFILAF
Sbjct: 66 MTSMLSISHRATGMILTFYTIVLGTGAIILPDSIETYLNALEEYHVGGVVLSVGKFILAF 125
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
P++YH NGIRHL WD G L++K+VY TG+AMLG A + VL+++
Sbjct: 126 PLTYHYWNGIRHLAWDIGLFLSLKEVYMTGFAMLGLAYGSAAVLSVI 172
>gi|350424987|ref|XP_003493977.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like [Bombus impatiens]
Length = 176
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 69/105 (65%), Gaps = 4/105 (3%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVG---LTTDINSVVSFVDALNLSAPILLAGKFILA 57
+T+ LSITHR TG+ L++YA+ L G+G + I ++ + L LSAP+L GK +LA
Sbjct: 70 LTAFLSITHRTTGMILSSYAM-LLGIGTLLIPGGIPCLIEIITNLGLSAPVLFTGKTLLA 128
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
P +YH NG RHL WD G L+IK+VY TGYA++ + ++ + L
Sbjct: 129 LPATYHVFNGFRHLAWDLGMFLSIKEVYCTGYAVIALSTISAIAL 173
>gi|350540078|ref|NP_001233755.1| succinate dehydrogenase cytochrome b560 subunit, mitochondrial
[Cricetulus griseus]
gi|21362398|sp|P70097.1|C560_CRIGR RecName: Full=Succinate dehydrogenase cytochrome b560 subunit,
mitochondrial; AltName: Full=Integral membrane protein
CII-3; AltName: Full=QPs-1; Short=QPs1; Flags: Precursor
gi|1518874|gb|AAB07265.1| integral membrane protein CII-3 [Cricetulus griseus]
Length = 169
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 66/98 (67%), Gaps = 2/98 (2%)
Query: 4 VLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVS 61
V+SI HRGTGVAL+ GL+ + L + S + F+ +L L ++ + KF+L FP+
Sbjct: 66 VMSICHRGTGVALSGGVSLFGLSALLLPGNFESYLMFIKSLCLGPALIHSAKFVLVFPLM 125
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTN 99
YH+ NGIRHLIWD G+ L+I +VY +G A+L A+L++
Sbjct: 126 YHSLNGIRHLIWDLGKGLSISQVYQSGVAVLMLAVLSS 163
>gi|344252465|gb|EGW08569.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
[Cricetulus griseus]
Length = 132
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 66/98 (67%), Gaps = 2/98 (2%)
Query: 4 VLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVS 61
V+SI HRGTGVAL+ GL+ + L + S + F+ +L L ++ + KF+L FP+
Sbjct: 29 VMSICHRGTGVALSGGVSLFGLSALLLPGNFESYLMFIKSLCLGPALIHSAKFVLVFPLM 88
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTN 99
YH+ NGIRHLIWD G+ L+I +VY +G A+L A+L++
Sbjct: 89 YHSLNGIRHLIWDLGKGLSISQVYQSGVAVLMLAVLSS 126
>gi|2137070|pir||I48085 integral membrane protein CII-3 - Chinese hamster (fragment)
Length = 171
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 66/98 (67%), Gaps = 2/98 (2%)
Query: 4 VLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVS 61
V+SI HRGTGVAL+ GL+ + L + S + F+ +L L ++ + KF+L FP+
Sbjct: 70 VMSICHRGTGVALSGGVSLFGLSALLLPGNFESYLMFIKSLCLGPALIHSAKFVLVFPLM 129
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTN 99
YH+ NGIRHLIWD G+ L+I +VY +G A+L A+L++
Sbjct: 130 YHSLNGIRHLIWDLGKGLSISQVYQSGVAVLMLAVLSS 167
>gi|332373648|gb|AEE61965.1| unknown [Dendroctonus ponderosae]
Length = 176
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 62/94 (65%), Gaps = 2/94 (2%)
Query: 1 ITSVLSITHRGTGVALTAYA--LGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+TS+LSI+HR TG+ LT Y +A V L + + + + + A KF++AF
Sbjct: 68 LTSMLSISHRATGMVLTGYTVLFSMAAVYLDCPLEHYIEQLRCAEIGFGSIYALKFLIAF 127
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAML 92
P++YH NGIRHLIWDTG+ LTI++VY TG+AML
Sbjct: 128 PLTYHFWNGIRHLIWDTGKFLTIREVYATGWAML 161
>gi|48727574|gb|AAT46090.1| integral membrane protein CII-3 [Branchiostoma belcheri
tsingtauense]
Length = 165
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 65/95 (68%), Gaps = 6/95 (6%)
Query: 1 ITSVLSITHRGTGVALT----AYALGLAGVG--LTTDINSVVSFVDALNLSAPILLAGKF 54
+T++LS+THRGTG A+ A+++G+ V L D +++SFV +L L ++L GK+
Sbjct: 70 LTAMLSMTHRGTGAAMAGCVYAFSMGMLVVNPLLGWDFPTIISFVKSLELHPWLILGGKW 129
Query: 55 ILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGY 89
+A+P+SYH NGIRHL WDTG +K +Y++G+
Sbjct: 130 CMAWPISYHAMNGIRHLTWDTGYGFDMKVLYSSGW 164
>gi|320168382|gb|EFW45281.1| succinate dehydrogenase cytochrome b subunit [Capsaspora owczarzaki
ATCC 30864]
Length = 159
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 71/108 (65%), Gaps = 4/108 (3%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSV---VSFVDALNLSAPILLAGKFILA 57
+TSVLSITHR TG A+T +A+ A V ++ + V +L+L + + L K+ILA
Sbjct: 53 LTSVLSITHRATGAAMT-FAISTAAVYSALSVHDFAYNIDLVRSLDLPSVVTLTAKYILA 111
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
+P+ YH+ NGIRHL+WD+GRAL +K Y GY + G +++ +LTLL
Sbjct: 112 WPLVYHSLNGIRHLVWDSGRALVLKDTYLGGYIVFGLSLVGASLLTLL 159
>gi|283135232|ref|NP_001164371.1| succinate dehydrogenase cytochrome b560 subunit, mitochondrial
[Nasonia vitripennis]
Length = 175
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 64/95 (67%), Gaps = 2/95 (2%)
Query: 1 ITSVLSITHRGTGVALTAYA--LGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+TS+LS+THRGTG+ L++YA LGL + + + +V + A L + +L GK + +
Sbjct: 69 LTSMLSVTHRGTGIVLSSYAMILGLGTLFVPGGVPCMVQAIAAWGLPSAVLYLGKAMFVY 128
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLG 93
P++YH NGIRHL WD G+ LTIK VY TG+ ++G
Sbjct: 129 PLTYHYLNGIRHLAWDLGKFLTIKDVYKTGWTVVG 163
>gi|225713156|gb|ACO12424.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
precursor [Lepeophtheirus salmonis]
Length = 173
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 74/107 (69%), Gaps = 5/107 (4%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+TS+LSITHRGTG+ LT YA GL L ++ + F+ +L ++ ++L KF +AF
Sbjct: 70 LTSMLSITHRGTGIFLTGVVYAGGLIPFLLPSNFPT---FLQSLEVAPSLILLFKFGIAF 126
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
P ++H+ NGIRHL WD G L I++VY++G ++ A++T+++LT+L
Sbjct: 127 PFAFHSWNGIRHLFWDMGIGLKIREVYSSGSLVVALALVTSVILTML 173
>gi|290560974|gb|ADD37889.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
[Lepeophtheirus salmonis]
Length = 173
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 74/107 (69%), Gaps = 5/107 (4%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+TS+LSITHRGTG+ LT YA GL L ++ + F+ +L ++ ++L KF +AF
Sbjct: 70 LTSMLSITHRGTGIFLTGVVYAGGLIPFLLPSNFPT---FLQSLEVAPSLILLFKFGIAF 126
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
P ++H+ NGIRHL WD G L I++VY++G ++ A++T+++LT+L
Sbjct: 127 PFAFHSWNGIRHLFWDMGIGLKIREVYSSGSLVVALALVTSVILTVL 173
>gi|225713228|gb|ACO12460.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
precursor [Lepeophtheirus salmonis]
Length = 173
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 74/107 (69%), Gaps = 5/107 (4%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+TS+LSITHRGTG+ LT YA GL L ++ + F+ +L ++ ++L KF +AF
Sbjct: 70 LTSMLSITHRGTGIFLTGVVYAGGLIPFLLPSNFPT---FLQSLEVAPSLILLFKFGIAF 126
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
P ++H+ NGIRHL WD G L I++VY++G ++ A++T+++LT+L
Sbjct: 127 PFAFHSWNGIRHLFWDMGIGLKIREVYSSGSLVVALALVTSVILTVL 173
>gi|218847754|ref|NP_001136371.1| succinate dehydrogenase complex, subunit C, integral membrane
protein, 15kDa [Xenopus (Silurana) tropicalis]
gi|163915714|gb|AAI57547.1| LOC496650 protein [Xenopus (Silurana) tropicalis]
Length = 169
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 63/100 (63%), Gaps = 2/100 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI+HRGTG+A+TA GLA + L D S + V +L+L ++ + KF LAFP++Y
Sbjct: 67 MSISHRGTGIAMTAGVSLFGLAALVLPGDFASYLELVKSLSLGPALIYSAKFALAFPLTY 126
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
H NGIRHL WD G+ L I +VY +G +L ++T L
Sbjct: 127 HVWNGIRHLTWDLGKGLKIPQVYRSGVTVLALTLITTATL 166
>gi|56611131|gb|AAH87773.1| LOC496650 protein, partial [Xenopus (Silurana) tropicalis]
Length = 167
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 63/100 (63%), Gaps = 2/100 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI+HRGTG+A+TA GLA + L D S + V +L+L ++ + KF LAFP++Y
Sbjct: 65 MSISHRGTGIAMTAGVSLFGLAALVLPGDFASYLELVKSLSLGPALIYSAKFALAFPLTY 124
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
H NGIRHL WD G+ L I +VY +G +L ++T L
Sbjct: 125 HVWNGIRHLTWDLGKGLKIPQVYRSGVTVLALTLITTATL 164
>gi|138519774|gb|AAI35209.1| LOC496650 protein [Xenopus (Silurana) tropicalis]
Length = 164
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 63/100 (63%), Gaps = 2/100 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI+HRGTG+A+TA GLA + L D S + V +L+L ++ + KF LAFP++Y
Sbjct: 62 MSISHRGTGIAMTAGVSLFGLAALVLPGDFASYLELVKSLSLGPALIYSAKFALAFPLTY 121
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
H NGIRHL WD G+ L I +VY +G +L ++T L
Sbjct: 122 HVWNGIRHLTWDLGKGLKIPQVYRSGVTVLALTLITTATL 161
>gi|57768830|ref|NP_001003523.1| succinate dehydrogenase complex, subunit C, integral membrane
protein [Danio rerio]
gi|50417100|gb|AAH78306.1| Succinate dehydrogenase complex, subunit C, integral membrane
protein [Danio rerio]
Length = 144
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+ +SI+HRGTG+AL++ A LA + L + + +L L KF LAF
Sbjct: 38 VPMAMSISHRGTGIALSSGISAFALAALVLPESYPYYLDLIHSLTFGPQFLAFSKFALAF 97
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNL 100
PV YHT NGIRHL WD G+ I +VY +GY +LG +LT++
Sbjct: 98 PVVYHTYNGIRHLAWDAGKGFKIPEVYRSGYVVLGLTVLTSI 139
>gi|395535339|ref|XP_003769685.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial [Sarcophilus harrisii]
Length = 169
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 4 VLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVS 61
++SITHRGTGVAL+A GLA + L S + V AL L + ++ KF L FP+
Sbjct: 66 MMSITHRGTGVALSAGVSLFGLAALLLPGSFESHLQLVKALGLGSSLIYTAKFALVFPLM 125
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTN 99
YHT NGIRHL+WD G+ L I ++Y +G A+L +L++
Sbjct: 126 YHTWNGIRHLMWDLGKGLKIPQLYQSGVAVLVLTVLSS 163
>gi|307203720|gb|EFN82680.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
[Harpegnathos saltator]
Length = 140
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 67/104 (64%), Gaps = 2/104 (1%)
Query: 1 ITSVLSITHRGTGVALTAYA--LGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+ ++LSITHR TG+ L++YA LGL + + I + ++ L + + IL GK +LA
Sbjct: 34 LPAMLSITHRTTGIILSSYAMFLGLGTLCIPGGIPCAIEILNDLYIPSLILFVGKTLLAL 93
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
P+++H NGIRHL WD G L IK+VY+TGY + A ++ LVL
Sbjct: 94 PITFHILNGIRHLAWDLGMFLKIKEVYSTGYVVSALAAISALVL 137
>gi|260811592|ref|XP_002600506.1| hypothetical protein BRAFLDRAFT_119291 [Branchiostoma floridae]
gi|229285793|gb|EEN56518.1| hypothetical protein BRAFLDRAFT_119291 [Branchiostoma floridae]
Length = 181
Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 71/112 (63%), Gaps = 7/112 (6%)
Query: 1 ITSVLSITHRGTGVALT----AYALGLAGVG--LTTDINSVVSFVDALNLSAPILLAGKF 54
+T++LSITHRGTG A+ A+++G+ V L D ++ +F+ +L + ++L GK+
Sbjct: 70 LTAMLSITHRGTGAAMAGFVYAFSVGMLVVNPLLGWDFPTIFNFIKSLEIHPWLILGGKW 129
Query: 55 ILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGY-AMLGAAILTNLVLTLL 105
+A+P+SYH NGIRHL WD G +K +Y +G+ G+ +L +L+L L
Sbjct: 130 CMAWPISYHAMNGIRHLNWDAGYGFDMKVLYRSGWFVFFGSFLLADLMLYFL 181
>gi|321470744|gb|EFX81719.1| hypothetical protein DAPPUDRAFT_49817 [Daphnia pulex]
Length = 169
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 65/103 (63%), Gaps = 3/103 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
LSITHR TG+A Y L + + L + ++A +L ++L+GKF++AFP SY
Sbjct: 68 LSITHRFTGLAQNGLMYGLAIGAMVLPASFPHYLGMLEAAHLPL-VVLSGKFLIAFPFSY 126
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
H NG+RHL+WDTG LTIK + +TGY +L AA+ L LT L
Sbjct: 127 HLINGMRHLVWDTGFNLTIKGIQSTGYVVLAAAVSLALYLTSL 169
>gi|405965053|gb|EKC30481.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
[Crassostrea gigas]
Length = 181
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%), Gaps = 2/99 (2%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAG--VGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+TS+LS+ HR TG+A+ +A +GL D +S + +V L+L+ IL A K++LAF
Sbjct: 74 LTSMLSLCHRATGIAMAVTVPFVAATLLGLPGDFSSYIDYVKDLHLNPAILTAAKYVLAF 133
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAIL 97
P+ YH NGIRHL WD +K Y +GY ++ A+L
Sbjct: 134 PICYHYINGIRHLAWDWAIGFDLKTTYQSGYFVMALALL 172
>gi|387914066|gb|AFK10642.1| succinate dehydrogenase complex subunit C isoform 1 precursor
[Callorhinchus milii]
Length = 169
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 68/104 (65%), Gaps = 2/104 (1%)
Query: 1 ITSVLSITHRGTGVAL-TAYAL-GLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
I +SI+HR TG L T +L L+ + + D + + FV +L L+ +L + KF+L+
Sbjct: 63 IPMAMSISHRMTGAGLATGLSLFSLSALVVPGDFETKLEFVRSLQLAPSLLFSAKFVLSL 122
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
P++YHT NGIRHL+WD+G+ LT+K + +G A+LG ++ L+L
Sbjct: 123 PLTYHTFNGIRHLVWDSGKGLTLKDMSISGLAILGGSVTFALIL 166
>gi|348561878|ref|XP_003466738.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like [Cavia porcellus]
Length = 169
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 64/98 (65%), Gaps = 2/98 (2%)
Query: 4 VLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVS 61
V+SI HRGTGVAL+ LG++ + L + S + V +L L ++ + KF LAFP+
Sbjct: 66 VMSICHRGTGVALSGGVSLLGVSALLLPGNFESYLEVVKSLCLGPTLIYSAKFTLAFPLM 125
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTN 99
YHT NGIRHL+WD G+ L ++Y +G A+L ++L++
Sbjct: 126 YHTWNGIRHLMWDLGKGLKTAQLYQSGVAVLVLSVLSS 163
>gi|355718222|gb|AES06198.1| succinate dehydrogenase complex, subunit C, integral membrane
protein, 15kDa [Mustela putorius furo]
Length = 168
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 61/97 (62%), Gaps = 2/97 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTGVAL+A GL+ + + + S + V +L L ++ KF L FP+ Y
Sbjct: 67 MSICHRGTGVALSAGVSLFGLSALLIPGNFESHLELVKSLCLGPSLIYTAKFALVFPLMY 126
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTN 99
HT NGIRHL+WD G+ L I ++Y +G A+L +LT+
Sbjct: 127 HTWNGIRHLVWDLGKGLKIPQLYQSGVAVLVLTVLTS 163
>gi|225717610|gb|ACO14651.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
precursor [Caligus clemensi]
Length = 173
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 71/107 (66%), Gaps = 5/107 (4%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+TS+LSI+HR +G+ LTA Y+ G L N+ +F+ ++ ++ ++ AGKF +AF
Sbjct: 70 LTSMLSISHRISGMYLTAILYSGGFLPFVLP---NNFPTFIQSIEIAPLLVTAGKFAIAF 126
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
P ++HT NG+RHL+WD G I +VY++G +L +++T ++LT L
Sbjct: 127 PFAFHTYNGLRHLLWDMGYGFKISEVYSSGAMVLAFSLITAIILTFL 173
>gi|410927041|ref|XP_003976976.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like [Takifugu rubripes]
Length = 169
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 66/107 (61%), Gaps = 2/107 (1%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+ ++SI HRGTGV L+ A +A + L + + + +L++ ++ KF +AF
Sbjct: 63 VPMMMSIAHRGTGVGLSGAISAFAVAALVLPGNYPDYLDLISSLSIGPGLIGMAKFGIAF 122
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
P S+HT NG+RHL WD G+ I +VY TGY ++G +I+T++ L LL
Sbjct: 123 PASFHTYNGVRHLWWDIGKGFRIPEVYRTGYTVIGLSIVTSIALMLL 169
>gi|345797821|ref|XP_003434362.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial isoform 1 [Canis lupus familiaris]
Length = 135
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 61/97 (62%), Gaps = 2/97 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTGVAL+A GL+ + + + S + V +L L ++ KF L FP+ Y
Sbjct: 33 MSICHRGTGVALSAGVSLFGLSALLVPGNFESHLELVKSLCLGPSLIYTAKFALVFPLMY 92
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTN 99
HT NGIRHLIWD G+ L I ++Y +G A+L +L++
Sbjct: 93 HTWNGIRHLIWDLGKGLKIPQLYQSGVAVLVLTVLSS 129
>gi|209738434|gb|ACI70086.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
precursor [Salmo salar]
Length = 131
Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
Query: 4 VLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVS 61
++SITHRGTGV L+ A L + L + + + +L++ +L KF +AFPVS
Sbjct: 27 MMSITHRGTGVGLSGGISAFALLALVLPGNYPYYLDLIHSLSVGPALLSLAKFGIAFPVS 86
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNL 100
YHT NGIRHL WD+G+ I +VY +GY ++ +ILT++
Sbjct: 87 YHTLNGIRHLFWDSGKGFKIPEVYRSGYVVIVLSILTSI 125
>gi|296490235|tpg|DAA32348.1| TPA: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like isoform 2 [Bos taurus]
Length = 116
Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A GL+ + + S + FV +L L ++ KF L FP+ Y
Sbjct: 14 MSICHRGTGIALSAGVSLFGLSALLVPGSFESHLEFVKSLCLGPALIHTAKFALVFPLMY 73
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTN 99
HT NGIRHL+WD G+ LTI +++ +G A+L +L++
Sbjct: 74 HTWNGIRHLMWDLGKGLTISQLHQSGEAVLVLTVLSS 110
>gi|296490236|tpg|DAA32349.1| TPA: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like isoform 3 [Bos taurus]
Length = 135
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A GL+ + + S + FV +L L ++ KF L FP+ Y
Sbjct: 33 MSICHRGTGIALSAGVSLFGLSALLVPGSFESHLEFVKSLCLGPALIHTAKFALVFPLMY 92
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTN 99
HT NGIRHL+WD G+ LTI +++ +G A+L +L++
Sbjct: 93 HTWNGIRHLMWDLGKGLTISQLHQSGEAVLVLTVLSS 129
>gi|221129025|ref|XP_002164804.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like [Hydra magnipapillata]
Length = 186
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 64/103 (62%), Gaps = 6/103 (5%)
Query: 4 VLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVS 61
+LS THR TG+A++ + +G A + L S + + ALNL +L K ++AFP+
Sbjct: 79 LLSGTHRFTGLAMSGIVFTVGSAALLLPGGAESYIDMIRALNLPIWVLAPAKCLIAFPLC 138
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTL 104
YHT NG+RHLIWDTGR +K +Y TGY A+ T++ LT+
Sbjct: 139 YHTVNGVRHLIWDTGRGFEMKTLYKTGY----FAVATSIALTI 177
>gi|57111445|ref|XP_536140.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial isoform 2 [Canis lupus familiaris]
Length = 169
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 62/98 (63%), Gaps = 2/98 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTGVAL+A GL+ + + + S + V +L L ++ KF L FP+ Y
Sbjct: 67 MSICHRGTGVALSAGVSLFGLSALLVPGNFESHLELVKSLCLGPSLIYTAKFALVFPLMY 126
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNL 100
HT NGIRHLIWD G+ L I ++Y +G A+L +L+++
Sbjct: 127 HTWNGIRHLIWDLGKGLKIPQLYQSGVAVLVLTVLSSV 164
>gi|426217013|ref|XP_004002748.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial isoform 3 [Ovis aries]
Length = 116
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A GL+ + + S + FV +L L ++ KF L FP+ Y
Sbjct: 14 MSICHRGTGIALSAGVSLFGLSALLVPGSFESHLEFVKSLCLGPALIHTAKFALVFPLMY 73
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTN 99
HT NGIRHL+WD G+ LTI +++ +G A+L +L++
Sbjct: 74 HTWNGIRHLMWDLGKGLTISQLHQSGVAVLVLTVLSS 110
>gi|301786727|ref|XP_002928777.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like isoform 2 [Ailuropoda melanoleuca]
Length = 135
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 61/97 (62%), Gaps = 2/97 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTGVAL+A GL+ + + + S + V +L L ++ KF L FP+ Y
Sbjct: 33 MSICHRGTGVALSAGVSLFGLSALLIPGNFESHLELVKSLCLGPSLIYTAKFALVFPLMY 92
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTN 99
HT NGIRHL+WD G+ L I ++Y +G A+L +L++
Sbjct: 93 HTWNGIRHLVWDLGKGLKIPQLYQSGVAVLVLTVLSS 129
>gi|296490234|tpg|DAA32347.1| TPA: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like isoform 1 [Bos taurus]
Length = 169
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A GL+ + + S + FV +L L ++ KF L FP+ Y
Sbjct: 67 MSICHRGTGIALSAGVSLFGLSALLVPGSFESHLEFVKSLCLGPALIHTAKFALVFPLMY 126
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTN 99
HT NGIRHL+WD G+ LTI +++ +G A+L +L++
Sbjct: 127 HTWNGIRHLMWDLGKGLTISQLHQSGEAVLVLTVLSS 163
>gi|426217011|ref|XP_004002747.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial isoform 2 [Ovis aries]
Length = 135
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A GL+ + + S + FV +L L ++ KF L FP+ Y
Sbjct: 33 MSICHRGTGIALSAGVSLFGLSALLVPGSFESHLEFVKSLCLGPALIHTAKFALVFPLMY 92
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTN 99
HT NGIRHL+WD G+ LTI +++ +G A+L +L++
Sbjct: 93 HTWNGIRHLMWDLGKGLTISQLHQSGVAVLVLTVLSS 129
>gi|402856904|ref|XP_003893019.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial [Papio anubis]
Length = 169
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 62/98 (63%), Gaps = 2/98 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A G++ + L + S + V +L L ++ KF L FP+ Y
Sbjct: 67 MSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELVKSLCLGPALIHTAKFALVFPLMY 126
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNL 100
HT NGIRHL+WD G+ L I ++Y +G A+L +L+++
Sbjct: 127 HTWNGIRHLMWDLGKGLKIPQLYQSGVAVLVLTVLSSM 164
>gi|221219496|gb|ACM08409.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
precursor [Salmo salar]
gi|221219988|gb|ACM08655.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
precursor [Salmo salar]
gi|221221046|gb|ACM09184.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
precursor [Salmo salar]
Length = 170
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
Query: 4 VLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVS 61
++SITHRGTGV L+ A L + L + + + +L++ +L KF +AFPVS
Sbjct: 66 MMSITHRGTGVGLSGGISAFALLALVLPGNYPYYLDLIHSLSVGPALLSLAKFGIAFPVS 125
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNL 100
YHT NGIRHL WD+G+ I +VY +GY ++ +ILT++
Sbjct: 126 YHTLNGIRHLFWDSGKGFKIPEVYRSGYVVIVLSILTSI 164
>gi|221220716|gb|ACM09019.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
precursor [Salmo salar]
Length = 170
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
Query: 4 VLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVS 61
++SITHRGTGV L+ A L + L + + + +L++ +L KF +AFPVS
Sbjct: 66 MMSITHRGTGVGLSGGISAFALLALVLPGNYPYYLDLIHSLSVGPALLSLAKFGIAFPVS 125
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNL 100
YHT NGIRHL WD+G+ I +VY +GY ++ +ILT++
Sbjct: 126 YHTLNGIRHLFWDSGKGFKIPEVYRSGYVVIVLSILTSI 164
>gi|221219992|gb|ACM08657.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
precursor [Salmo salar]
Length = 170
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
Query: 4 VLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVS 61
++SITHRGTGV L+ A L + L + + + +L++ +L KF +AFPVS
Sbjct: 66 MMSITHRGTGVGLSGGISAFALLALVLPGNYPYYLDLIHSLSVGPALLSLAKFGIAFPVS 125
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNL 100
YHT NGIRHL WD+G+ I +VY +GY ++ +ILT++
Sbjct: 126 YHTLNGIRHLFWDSGKGFKIPEVYRSGYVVIVLSILTSI 164
>gi|221220816|gb|ACM09069.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
precursor [Salmo salar]
gi|221221340|gb|ACM09331.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
precursor [Salmo salar]
gi|221221580|gb|ACM09451.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
precursor [Salmo salar]
Length = 170
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
Query: 4 VLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVS 61
++SITHRGTGV L+ A L + L + + + +L++ +L KF +AFPVS
Sbjct: 66 MMSITHRGTGVGLSGGISAFALLALVLPGNYPYYLDLIHSLSVGPALLSLAKFGIAFPVS 125
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNL 100
YHT NGIRHL WD+G+ I +VY +GY ++ +ILT++
Sbjct: 126 YHTLNGIRHLFWDSGKGFKIPEVYRSGYVVIVLSILTSI 164
>gi|348519978|ref|XP_003447506.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like [Oreochromis niloticus]
Length = 169
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 66/107 (61%), Gaps = 2/107 (1%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+ ++SITHRGTGV L+ A +A + L + + +L++ + KF +AF
Sbjct: 63 VPMMMSITHRGTGVGLSGAISAFAVAALVLPGSYPYYLDLIHSLSIGPFLTGLAKFGIAF 122
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
PVSYHT NGIRHL WD G+ I +VY TGY ++G +++T++ L ++
Sbjct: 123 PVSYHTYNGIRHLGWDMGKGFKIPEVYRTGYTVIGLSVITSIALLMI 169
>gi|426217009|ref|XP_004002746.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial isoform 1 [Ovis aries]
Length = 169
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A GL+ + + S + FV +L L ++ KF L FP+ Y
Sbjct: 67 MSICHRGTGIALSAGVSLFGLSALLVPGSFESHLEFVKSLCLGPALIHTAKFALVFPLMY 126
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNL 100
HT NGIRHL+WD G+ LTI +++ +G A+L +L+++
Sbjct: 127 HTWNGIRHLMWDLGKGLTISQLHQSGVAVLVLTVLSSV 164
>gi|301786725|ref|XP_002928776.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like isoform 1 [Ailuropoda melanoleuca]
Length = 169
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 62/98 (63%), Gaps = 2/98 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTGVAL+A GL+ + + + S + V +L L ++ KF L FP+ Y
Sbjct: 67 MSICHRGTGVALSAGVSLFGLSALLIPGNFESHLELVKSLCLGPSLIYTAKFALVFPLMY 126
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNL 100
HT NGIRHL+WD G+ L I ++Y +G A+L +L+++
Sbjct: 127 HTWNGIRHLVWDLGKGLKIPQLYQSGVAVLVLTVLSSV 164
>gi|28461247|ref|NP_787008.1| succinate dehydrogenase cytochrome b560 subunit, mitochondrial
precursor [Bos taurus]
gi|1705529|sp|P35720.2|C560_BOVIN RecName: Full=Succinate dehydrogenase cytochrome b560 subunit,
mitochondrial; AltName: Full=Integral membrane protein
CII-3; AltName: Full=QPs-1; Short=QPs1; AltName:
Full=Succinate dehydrogenase complex subunit C; Flags:
Precursor
gi|786511|gb|AAB32390.1| succinate-ubiquinone oxidoreductase complex II membrane-intrinsic
subunit [Bos taurus]
gi|74267618|gb|AAI02063.1| Succinate dehydrogenase complex, subunit C, integral membrane
protein, 15kDa [Bos taurus]
gi|296489839|tpg|DAA31952.1| TPA: succinate dehydrogenase cytochrome b560 subunit, mitochondrial
precursor [Bos taurus]
gi|1092498|prf||2024211A succinate ubiquinone oxidoreductase
Length = 169
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A GL+ + + S + FV +L L ++ KF L FP+ Y
Sbjct: 67 MSICHRGTGIALSAGVSLFGLSALLVPGSFESHLEFVKSLCLGPALIHTAKFALVFPLMY 126
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNL 100
HT NGIRHL+WD G+ LTI +++ +G A+L +L+++
Sbjct: 127 HTWNGIRHLMWDLGKGLTISQLHQSGVAVLVLTVLSSV 164
>gi|95769404|gb|ABF57433.1| succinate dehydrogenase complex, subunit C isoform 1 precursor [Bos
taurus]
Length = 168
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A GL+ + + S + FV +L L ++ KF L FP+ Y
Sbjct: 66 MSICHRGTGIALSAGVSLFGLSALLVPGSFESHLEFVKSLCLGPALIHTAKFALVFPLMY 125
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNL 100
HT NGIRHL+WD G+ LTI +++ +G A+L +L+++
Sbjct: 126 HTWNGIRHLMWDLGKGLTISQLHQSGVAVLVLTVLSSV 163
>gi|162939|gb|AAA21608.1| cytochrome b-560 [Bos taurus]
Length = 132
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A GL+ + + S + FV +L L ++ KF L FP+ Y
Sbjct: 30 MSICHRGTGIALSAGVSLFGLSALLVPGSFESHLEFVKSLCLGPALIHTAKFALVFPLMY 89
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNL 100
HT NGIRHL+WD G+ LTI +++ +G A+L +L+++
Sbjct: 90 HTWNGIRHLMWDLGKGLTISQLHQSGVAVLVLTVLSSV 127
>gi|281352142|gb|EFB27726.1| hypothetical protein PANDA_018826 [Ailuropoda melanoleuca]
Length = 144
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 62/98 (63%), Gaps = 2/98 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTGVAL+A GL+ + + + S + V +L L ++ KF L FP+ Y
Sbjct: 42 MSICHRGTGVALSAGVSLFGLSALLIPGNFESHLELVKSLCLGPSLIYTAKFALVFPLMY 101
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNL 100
HT NGIRHL+WD G+ L I ++Y +G A+L +L+++
Sbjct: 102 HTWNGIRHLVWDLGKGLKIPQLYQSGVAVLVLTVLSSV 139
>gi|440893889|gb|ELR46505.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial [Bos
grunniens mutus]
Length = 172
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A GL+ + + S + FV +L L ++ KF L FP+ Y
Sbjct: 70 MSICHRGTGIALSAGVSLFGLSALLVPGSFESHLEFVKSLCLGPALIHTAKFALVFPLMY 129
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNL 100
HT NGIRHL+WD G+ LTI +++ +G A+L +L+++
Sbjct: 130 HTWNGIRHLMWDLGKGLTISQLHQSGVAVLVLTVLSSV 167
>gi|894229|gb|AAB33776.1| succinate-ubiquinone reductase QPs1 subunit [cattle, heart, Peptide
Mitochondrial, 140 aa]
Length = 140
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A GL+ + + S + FV +L L ++ KF L FP+ Y
Sbjct: 38 MSICHRGTGIALSAGVSLFGLSALLVPGSFESHLEFVKSLCLGPALIHTAKFALVFPLMY 97
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNL 100
HT NGIRHL+WD G+ LTI +++ +G A+L +L+++
Sbjct: 98 HTWNGIRHLMWDLGKGLTISQLHQSGVAVLVLTVLSSV 135
>gi|209731756|gb|ACI66747.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
precursor [Salmo salar]
Length = 170
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 65/102 (63%), Gaps = 2/102 (1%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+ ++SITHRGTGV L+ A L + L + + + +L++ +L KF +AF
Sbjct: 63 VPMMMSITHRGTGVGLSGGISAFALLALVLPGNYPYYLDLIHSLSIGPALLGLAKFGIAF 122
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNL 100
P+SYHT NGIRHL WD+G+ T+ +VY +GY ++ +ILT++
Sbjct: 123 PLSYHTLNGIRHLFWDSGKGFTLPEVYRSGYVVIVLSILTSI 164
>gi|167522351|ref|XP_001745513.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775862|gb|EDQ89484.1| predicted protein [Monosiga brevicollis MX1]
Length = 178
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 66/106 (62%), Gaps = 2/106 (1%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTT-DINSVVSFVDALNLSAPILLAGKFILAFP 59
+ ++LSI+HR +G ALT A+ A +GL ++ + V A+ L A K +LAFP
Sbjct: 74 LPAILSISHRVSGAALT-MAISAAAIGLMVHPLSFYIDAVQAMQLPAACFFTTKTLLAFP 132
Query: 60 VSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
+YHT NG+RHL WDT + L + VY++GY M+G +++ + L +L
Sbjct: 133 FTYHTVNGLRHLFWDTAKGLELGPVYSSGYMMVGLGLVSAVGLAML 178
>gi|209737836|gb|ACI69787.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
precursor [Salmo salar]
gi|303658983|gb|ADM15942.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
precursor [Salmo salar]
Length = 170
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 65/102 (63%), Gaps = 2/102 (1%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+ ++SITHRGTGV L+ A L + L + + + +L++ +L KF +AF
Sbjct: 63 VPMMMSITHRGTGVGLSGGISAFALLALVLPGNYPYYLDLIHSLSIGPALLGLAKFGIAF 122
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNL 100
P+SYHT NGIRHL WD+G+ T+ +VY +GY ++ +ILT++
Sbjct: 123 PLSYHTLNGIRHLFWDSGKGFTLPEVYRSGYVVIVLSILTSI 164
>gi|308323411|gb|ADO28842.1| mitochondrial succinate dehydrogenase cytochrome b560 subunit
[Ictalurus punctatus]
Length = 166
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 65/107 (60%), Gaps = 2/107 (1%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+ ++SITHRGTGV L+A A A + L + V + ++ ++ KF L+F
Sbjct: 60 VPMMMSITHRGTGVVLSAGISAFAAAALVLPGSFPYYLDLVHSFSMGPALITTAKFALSF 119
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
PV+YHT NGIRHL+WD G+ I +VY +GY ++ +I T++ LT L
Sbjct: 120 PVAYHTYNGIRHLMWDVGKGFKIPEVYHSGYIVIALSIFTSVALTAL 166
>gi|432911321|ref|XP_004078622.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like [Oryzias latipes]
Length = 169
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 70/108 (64%), Gaps = 4/108 (3%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLA-GKFILA 57
+ ++SITHRGTG+AL+ A A + L + + + +L++ P+L+ KF +A
Sbjct: 63 VPMLMSITHRGTGLALSGGISAFAAAALVLPGNYPYYLDLIHSLSV-GPVLIGLAKFGIA 121
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
FPVSYHT NGIRHL WD G+ + +V +GY ++G +++T++VL L+
Sbjct: 122 FPVSYHTYNGIRHLCWDLGKGFRLPEVNRSGYVVIGLSVITSIVLALI 169
>gi|410986621|ref|XP_003999608.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial isoform 2 [Felis catus]
Length = 135
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 61/97 (62%), Gaps = 2/97 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A GL+ + + + S + V +L L ++ KF L FP+ Y
Sbjct: 33 MSICHRGTGMALSAGVSLFGLSALLVPGNFESHLELVKSLCLGPSLIYTAKFALVFPLMY 92
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTN 99
HT NGIRHL+WD G+ L I ++Y +G A+L +L++
Sbjct: 93 HTWNGIRHLMWDLGKGLKIPQLYQSGVAVLVLTVLSS 129
>gi|119610981|gb|EAW90575.1| hCG1776980 [Homo sapiens]
Length = 135
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A G++ V L + S + V +L L ++ KF L FP+ Y
Sbjct: 33 MSICHRGTGIALSAGVSLFGMSAVLLPGNFESYLELVKSLCLGPALIHTAKFALVFPLMY 92
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTG 88
HT NGIRHL+WD G+ L I ++Y +G
Sbjct: 93 HTWNGIRHLMWDLGKGLKIPQLYQSG 118
>gi|410986619|ref|XP_003999607.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial isoform 1 [Felis catus]
Length = 169
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 61/97 (62%), Gaps = 2/97 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A GL+ + + + S + V +L L ++ KF L FP+ Y
Sbjct: 67 MSICHRGTGMALSAGVSLFGLSALLVPGNFESHLELVKSLCLGPSLIYTAKFALVFPLMY 126
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTN 99
HT NGIRHL+WD G+ L I ++Y +G A+L +L++
Sbjct: 127 HTWNGIRHLMWDLGKGLKIPQLYQSGVAVLVLTVLSS 163
>gi|355757254|gb|EHH60779.1| hypothetical protein EGM_18638 [Macaca fascicularis]
Length = 169
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+ALTA G++ + L + S + V +L L ++ KF L FP+ Y
Sbjct: 67 MSICHRGTGIALTAGVSLFGMSALLLPGNFESYLELVKSLCLGPALIHTAKFALVFPLMY 126
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTG 88
HT NGIRHL+WD G+ L I ++Y +G
Sbjct: 127 HTWNGIRHLMWDLGKGLKIPQLYQSG 152
>gi|225717882|gb|ACO14787.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
precursor [Caligus clemensi]
Length = 173
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 70/107 (65%), Gaps = 5/107 (4%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+TS+LSI+HR +G+ LTA Y+ G L ++ + F+ ++ ++ ++ AGKF +AF
Sbjct: 70 LTSMLSISHRISGMYLTAILYSGGFLPFVLPSNFPT---FIQSIEIAPLLVTAGKFAIAF 126
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
P + HT NG+RHL+WD G I +VY++G +L +++T ++LT L
Sbjct: 127 PFAIHTYNGLRHLLWDMGYGFKISEVYSSGAMVLAFSLITAIILTFL 173
>gi|85544667|pdb|2FBW|C Chain C, Avian Respiratory Complex Ii With Carboxin Bound
gi|85544671|pdb|2FBW|P Chain P, Avian Respiratory Complex Ii With Carboxin Bound
gi|304445606|pdb|2WQY|C Chain C, Remodelling Of Carboxin Binding To The Q-Site Of Avian
Respiratory Complex Ii
gi|304445610|pdb|2WQY|P Chain P, Remodelling Of Carboxin Binding To The Q-Site Of Avian
Respiratory Complex Ii
Length = 141
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Query: 5 LSITHRGTGVALT--AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SITHRGTGVAL+ +A + L V+ V +L+LS ++ + KF L FP+SY
Sbjct: 38 MSITHRGTGVALSLGVSLFSVAALLLPEQFPHYVAVVKSLSLSPALIYSAKFALVFPLSY 97
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYAML 92
HT NGIRHL+WD G+ + +V +G +L
Sbjct: 98 HTWNGIRHLVWDMGKGFKLSQVEQSGVVVL 127
>gi|332219329|ref|XP_003258809.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial isoform 2 [Nomascus leucogenys]
Length = 135
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A G++ + L + S + V +L L ++ KF L FP+ Y
Sbjct: 33 MSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELVKSLCLGPALIHTAKFALVFPLMY 92
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTG 88
HT NGIRHL+WD G+ L I ++Y +G
Sbjct: 93 HTWNGIRHLVWDLGKGLKIPQLYQSG 118
>gi|78711824|ref|NP_001030590.1| succinate dehydrogenase cytochrome b560 subunit, mitochondrial
isoform 4 precursor [Homo sapiens]
gi|78096637|dbj|BAE46977.1| succinate dehydrogenase complex, subunit C delta2+3 alternative
splicing variant [Homo sapiens]
Length = 116
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A G++ + L + S + V +L L ++ KF L FP+ Y
Sbjct: 14 MSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELVKSLCLGPALIHTAKFALVFPLMY 73
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTG 88
HT NGIRHL+WD G+ L I ++Y +G
Sbjct: 74 HTWNGIRHLMWDLGKGLKIPQLYQSG 99
>gi|297303518|ref|XP_001093286.2| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like isoform 3 [Macaca mulatta]
Length = 134
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A G++ + L + S + V +L L ++ KF L FP+ Y
Sbjct: 32 MSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELVKSLCLGPALIHTAKFALVFPLMY 91
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTG 88
HT NGIRHL+WD G+ L I ++Y +G
Sbjct: 92 HTWNGIRHLMWDLGKGLKIPQLYQSG 117
>gi|297299282|ref|XP_001093611.2| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like isoform 2 [Macaca mulatta]
gi|194374461|dbj|BAG57126.1| unnamed protein product [Homo sapiens]
Length = 134
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A G++ + L + S + V +L L ++ KF L FP+ Y
Sbjct: 32 MSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELVKSLCLGPALIHTAKFALVFPLMY 91
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTG 88
HT NGIRHL+WD G+ L I ++Y +G
Sbjct: 92 HTWNGIRHLMWDLGKGLKIPQLYQSG 117
>gi|78711822|ref|NP_001030589.1| succinate dehydrogenase cytochrome b560 subunit, mitochondrial
isoform 3 precursor [Homo sapiens]
gi|3420826|gb|AAC31940.1| integral membrane protein CII-3b [Homo sapiens]
gi|78096639|dbj|BAE46978.1| succinate dehydrogenase complex, subunit C delta3 alternative
splicing variant [Homo sapiens]
gi|119572989|gb|EAW52604.1| succinate dehydrogenase complex, subunit C, integral membrane
protein, 15kDa, isoform CRA_g [Homo sapiens]
Length = 135
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A G++ + L + S + V +L L ++ KF L FP+ Y
Sbjct: 33 MSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELVKSLCLGPALIHTAKFALVFPLMY 92
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTG 88
HT NGIRHL+WD G+ L I ++Y +G
Sbjct: 93 HTWNGIRHLMWDLGKGLKIPQLYQSG 118
>gi|403294098|ref|XP_003938041.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial isoform 3 [Saimiri boliviensis
boliviensis]
Length = 116
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A G++ + L + S + V +L L ++ KF L FP+ Y
Sbjct: 14 MSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELVKSLYLGPAVIHTAKFALVFPLMY 73
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTG 88
HT NGIRHL+WD G+ L I ++Y +G
Sbjct: 74 HTWNGIRHLMWDLGKGLKIPQLYQSG 99
>gi|403294096|ref|XP_003938040.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial isoform 2 [Saimiri boliviensis
boliviensis]
Length = 135
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A G++ + L + S + V +L L ++ KF L FP+ Y
Sbjct: 33 MSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELVKSLYLGPAVIHTAKFALVFPLMY 92
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTG 88
HT NGIRHL+WD G+ L I ++Y +G
Sbjct: 93 HTWNGIRHLMWDLGKGLKIPQLYQSG 118
>gi|332219327|ref|XP_003258808.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial isoform 1 [Nomascus leucogenys]
Length = 169
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A G++ + L + S + V +L L ++ KF L FP+ Y
Sbjct: 67 MSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELVKSLCLGPALIHTAKFALVFPLMY 126
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTG 88
HT NGIRHL+WD G+ L I ++Y +G
Sbjct: 127 HTWNGIRHLVWDLGKGLKIPQLYQSG 152
>gi|384941920|gb|AFI34565.1| succinate dehydrogenase cytochrome b560 subunit, mitochondrial
isoform 1 precursor [Macaca mulatta]
Length = 169
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A G++ + L + S + V +L L ++ KF L FP+ Y
Sbjct: 67 MSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELVKSLCLGPALIHTAKFALVFPLMY 126
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTG 88
HT NGIRHL+WD G+ L I ++Y +G
Sbjct: 127 HTWNGIRHLMWDLGKGLKIPQLYQSG 152
>gi|119572982|gb|EAW52597.1| succinate dehydrogenase complex, subunit C, integral membrane
protein, 15kDa, isoform CRA_a [Homo sapiens]
gi|119572983|gb|EAW52598.1| succinate dehydrogenase complex, subunit C, integral membrane
protein, 15kDa, isoform CRA_a [Homo sapiens]
Length = 105
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A G++ + L + S + V +L L ++ KF L FP+ Y
Sbjct: 3 MSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELVKSLCLGPALIHTAKFALVFPLMY 62
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTG 88
HT NGIRHL+WD G+ L I ++Y +G
Sbjct: 63 HTWNGIRHLMWDLGKGLKIPQLYQSG 88
>gi|119572986|gb|EAW52601.1| succinate dehydrogenase complex, subunit C, integral membrane
protein, 15kDa, isoform CRA_d [Homo sapiens]
Length = 150
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A G++ + L + S + V +L L ++ KF L FP+ Y
Sbjct: 48 MSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELVKSLCLGPALIHTAKFALVFPLMY 107
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTG 88
HT NGIRHL+WD G+ L I ++Y +G
Sbjct: 108 HTWNGIRHLMWDLGKGLKIPQLYQSG 133
>gi|302191657|ref|NP_001180516.1| succinate dehydrogenase complex, subunit C, integral membrane
protein, 15kDa [Macaca mulatta]
gi|109086211|ref|XP_001093733.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like isoform 3 [Macaca mulatta]
gi|355558668|gb|EHH15448.1| hypothetical protein EGK_01538 [Macaca mulatta]
Length = 169
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A G++ + L + S + V +L L ++ KF L FP+ Y
Sbjct: 67 MSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELVKSLCLGPALIHTAKFALVFPLMY 126
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTG 88
HT NGIRHL+WD G+ L I ++Y +G
Sbjct: 127 HTWNGIRHLMWDLGKGLKIPQLYQSG 152
>gi|109130264|ref|XP_001093391.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like isoform 4 [Macaca mulatta]
gi|355697888|gb|EHH28436.1| hypothetical protein EGK_18874 [Macaca mulatta]
Length = 169
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A G++ + L + S + V +L L ++ KF L FP+ Y
Sbjct: 67 MSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELVKSLCLGPALIHTAKFALVFPLMY 126
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTG 88
HT NGIRHL+WD G+ L I ++Y +G
Sbjct: 127 HTWNGIRHLMWDLGKGLKIPQLYQSG 152
>gi|4506863|ref|NP_002992.1| succinate dehydrogenase cytochrome b560 subunit, mitochondrial
isoform 1 precursor [Homo sapiens]
gi|5915811|sp|Q99643.1|C560_HUMAN RecName: Full=Succinate dehydrogenase cytochrome b560 subunit,
mitochondrial; AltName: Full=Integral membrane protein
CII-3; AltName: Full=QPs-1; Short=QPs1; AltName:
Full=Succinate dehydrogenase complex subunit C; AltName:
Full=Succinate-ubiquinone oxidoreductase cytochrome B
large subunit; Short=CYBL; Flags: Precursor
gi|1814226|gb|AAB41838.1| integral membrane protein CII-3 [Homo sapiens]
gi|3366669|gb|AAC27993.1| succinate dehydrogenase subunit C [Homo sapiens]
gi|3370989|dbj|BAA31998.1| cytochrome b large subunit of complex II [Homo sapiens]
gi|18088742|gb|AAH20808.1| Succinate dehydrogenase complex, subunit C, integral membrane
protein, 15kDa [Homo sapiens]
gi|21708000|gb|AAH33626.1| Succinate dehydrogenase complex, subunit C, integral membrane
protein, 15kDa [Homo sapiens]
gi|42542834|gb|AAH66329.1| Succinate dehydrogenase complex, subunit C, integral membrane
protein, 15kDa [Homo sapiens]
gi|119572985|gb|EAW52600.1| succinate dehydrogenase complex, subunit C, integral membrane
protein, 15kDa, isoform CRA_c [Homo sapiens]
Length = 169
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A G++ + L + S + V +L L ++ KF L FP+ Y
Sbjct: 67 MSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELVKSLCLGPALIHTAKFALVFPLMY 126
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTG 88
HT NGIRHL+WD G+ L I ++Y +G
Sbjct: 127 HTWNGIRHLMWDLGKGLKIPQLYQSG 152
>gi|13543226|gb|AAH05779.1| Sdhc protein [Mus musculus]
Length = 169
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
LS+ HRG+G+AL+ GL+ + L + S + FV +L L ++ + KF+L FP+ Y
Sbjct: 67 LSVCHRGSGIALSGGVSLFGLSALVLPGNFESYLMFVKSLCLGPTLIYSAKFVLVFPLMY 126
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTG 88
H+ NGIRHL+WD G+ L I +V+ +G
Sbjct: 127 HSLNGIRHLLWDLGKGLAIPQVWLSG 152
>gi|48146321|emb|CAG33383.1| SDHC [Homo sapiens]
Length = 169
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A G++ + L + S + V +L L ++ KF L FP+ Y
Sbjct: 67 MSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELVKSLCLGPALIHTAKFALVFPLMY 126
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTG 88
HT NGIRHL+WD G+ L I ++Y +G
Sbjct: 127 HTWNGIRHLMWDLGKGLKIPQLYQSG 152
>gi|403294094|ref|XP_003938039.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial isoform 1 [Saimiri boliviensis
boliviensis]
Length = 169
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A G++ + L + S + V +L L ++ KF L FP+ Y
Sbjct: 67 MSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELVKSLYLGPAVIHTAKFALVFPLMY 126
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTG 88
HT NGIRHL+WD G+ L I ++Y +G
Sbjct: 127 HTWNGIRHLMWDLGKGLKIPQLYQSG 152
>gi|148707185|gb|EDL39132.1| succinate dehydrogenase complex, subunit C, integral membrane
protein, isoform CRA_a [Mus musculus]
Length = 150
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
LS+ HRG+G+AL+ GL+ + L + S + FV +L L ++ + KF+L FP+ Y
Sbjct: 48 LSVCHRGSGIALSGGVSLFGLSALLLPGNFESYLMFVKSLCLGPTLIYSAKFVLVFPLMY 107
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTG 88
H+ NGIRHL+WD G+ L I +V+ +G
Sbjct: 108 HSLNGIRHLLWDLGKGLAIPQVWLSG 133
>gi|380797697|gb|AFE70724.1| succinate dehydrogenase cytochrome b560 subunit, mitochondrial
isoform 1 precursor, partial [Macaca mulatta]
Length = 165
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A G++ + L + S + V +L L ++ KF L FP+ Y
Sbjct: 63 MSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELVKSLCLGPALIHTAKFALVFPLMY 122
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTG 88
HT NGIRHL+WD G+ L I ++Y +G
Sbjct: 123 HTWNGIRHLMWDLGKGLKIPQLYQSG 148
>gi|296229472|ref|XP_002760248.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like isoform 1 [Callithrix jacchus]
Length = 135
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A G++ + L + S + V +L L ++ KF L FP+ Y
Sbjct: 33 MSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELVKSLYLGPALIHTAKFALVFPLMY 92
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTG 88
HT NGIRHL+WD G+ L I ++Y +G
Sbjct: 93 HTWNGIRHLMWDLGKGLKIPQLYQSG 118
>gi|148707186|gb|EDL39133.1| succinate dehydrogenase complex, subunit C, integral membrane
protein, isoform CRA_b [Mus musculus]
Length = 169
Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
LS+ HRG+G+AL+ GL+ + L + S + FV +L L ++ + KF+L FP+ Y
Sbjct: 67 LSVCHRGSGIALSGGVSLFGLSALLLPGNFESYLMFVKSLCLGPTLIYSAKFVLVFPLMY 126
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTG 88
H+ NGIRHL+WD G+ L I +V+ +G
Sbjct: 127 HSLNGIRHLLWDLGKGLAIPQVWLSG 152
>gi|228008307|ref|NP_079597.2| succinate dehydrogenase cytochrome b560 subunit, mitochondrial
precursor [Mus musculus]
gi|21362402|sp|Q9CZB0.1|C560_MOUSE RecName: Full=Succinate dehydrogenase cytochrome b560 subunit,
mitochondrial; AltName: Full=Integral membrane protein
CII-3; AltName: Full=QPs-1; Short=QPs1; Flags: Precursor
gi|12849813|dbj|BAB28491.1| unnamed protein product [Mus musculus]
gi|26328275|dbj|BAC27878.1| unnamed protein product [Mus musculus]
gi|74183258|dbj|BAE22557.1| unnamed protein product [Mus musculus]
Length = 169
Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
LS+ HRG+G+AL+ GL+ + L + S + FV +L L ++ + KF+L FP+ Y
Sbjct: 67 LSVCHRGSGIALSGGVSLFGLSALLLPGNFESYLMFVKSLCLGPTLIYSAKFVLVFPLMY 126
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTG 88
H+ NGIRHL+WD G+ L I +V+ +G
Sbjct: 127 HSLNGIRHLLWDLGKGLAIPQVWLSG 152
>gi|119572987|gb|EAW52602.1| succinate dehydrogenase complex, subunit C, integral membrane
protein, 15kDa, isoform CRA_e [Homo sapiens]
Length = 156
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A G++ + L + S + V +L L ++ KF L FP+ Y
Sbjct: 54 MSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELVKSLCLGPALIHTAKFALVFPLMY 113
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTG 88
HT NGIRHL+WD G+ L I ++Y +G
Sbjct: 114 HTWNGIRHLMWDLGKGLKIPQLYQSG 139
>gi|12832459|dbj|BAB22116.1| unnamed protein product [Mus musculus]
Length = 169
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
LS+ HRG+G+AL+ GL+ + L + S + FV +L L ++ + KF+L FP+ Y
Sbjct: 67 LSVCHRGSGIALSGGVSLFGLSALLLPGNFESYLMFVKSLCLGPTLIYSAKFVLVFPLMY 126
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTG 88
H+ NGIRHL+WD G+ L I +V+ +G
Sbjct: 127 HSLNGIRHLLWDLGKGLAIPQVWLSG 152
>gi|53237071|gb|AAH83091.1| Succinate dehydrogenase complex, subunit C, integral membrane
protein [Mus musculus]
Length = 169
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
LS+ HRG+G+AL+ GL+ + L + S + FV +L L ++ + KF+L FP+ Y
Sbjct: 67 LSVCHRGSGIALSGGVSLFGLSALLLPGNFESYLMFVKSLCLGPTLIYSAKFVLVFPLMY 126
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTG 88
H+ NGIRHL+WD G+ L I +V+ +G
Sbjct: 127 HSLNGIRHLLWDLGKGLAIPQVWLSG 152
>gi|397481268|ref|XP_003811870.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial [Pan paniscus]
Length = 200
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A G++ + L + S + V +L L ++ KF L FP+ Y
Sbjct: 98 MSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELVKSLCLGPALIHTAKFALVFPLMY 157
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTG 88
HT NGIRHL+WD G+ L I ++Y +G
Sbjct: 158 HTWNGIRHLMWDLGKGLKIPQLYQSG 183
>gi|390476939|ref|XP_003735211.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like [Callithrix jacchus]
Length = 169
Score = 77.8 bits (190), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A G++ + L + S + V +L L ++ KF L FP+ Y
Sbjct: 67 MSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELVKSLYLGPALIHTAKFALVFPLMY 126
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTG 88
HT NGIRHL+WD G+ L I ++Y +G
Sbjct: 127 HTWNGIRHLMWDLGKGLKIPQLYQSG 152
>gi|297493990|gb|ADI40717.1| succinate dehydrogenase complex subunit C [Miniopterus
schreibersii]
Length = 139
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTGVAL+A GL+ + L + S + V +L L ++ KF L FP+ Y
Sbjct: 51 MSICHRGTGVALSAGVSLFGLSALLLPGNFESHLELVKSLCLGPALIHTAKFALVFPLMY 110
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYA 90
HT NGIRHL+WD G+ L I +++ +G A
Sbjct: 111 HTWNGIRHLMWDLGKGLKIPQLHQSGVA 138
>gi|119572984|gb|EAW52599.1| succinate dehydrogenase complex, subunit C, integral membrane
protein, 15kDa, isoform CRA_b [Homo sapiens]
Length = 189
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Query: 4 VLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVS 61
+SI HRGTG+AL+A G++ + L + S + V +L L ++ KF L FP+
Sbjct: 86 AMSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELVKSLCLGPALIHTAKFALVFPLM 145
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTTG 88
YHT NGIRHL+WD G+ L I ++Y +G
Sbjct: 146 YHTWNGIRHLMWDLGKGLKIPQLYQSG 172
>gi|427786471|gb|JAA58687.1| Putative succinate dehydrogenase cytochrome b subunit
[Rhipicephalus pulchellus]
Length = 173
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 67/109 (61%), Gaps = 8/109 (7%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINS-----VVSFVDALNLSAPILLAGKFI 55
+TS+LS+THR TG A+ A+GL G+GL + S V + A+++ + K
Sbjct: 67 MTSMLSLTHRATGCAM---AVGLYGMGLMPFVCSHNFPHYVEALQAMHIWPIVTFPVKLG 123
Query: 56 LAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTL 104
LAF +SYHT NGIRHL WD G ++K++Y TG+ ++G ++ T +VL
Sbjct: 124 LAFCLSYHTFNGIRHLAWDLGLGFSLKELYATGFVVIGLSLATAVVLAF 172
>gi|427786469|gb|JAA58686.1| Putative succinate dehydrogenase cytochrome b subunit
[Rhipicephalus pulchellus]
Length = 173
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 67/109 (61%), Gaps = 8/109 (7%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGL-----TTDINSVVSFVDALNLSAPILLAGKFI 55
+TS+LS+THR TG A+ A+GL G+GL + + V + A+++ + K
Sbjct: 67 MTSMLSLTHRATGCAM---AVGLYGMGLMPFMCSHNFPHYVEALQAMHIWPVVTFPVKLG 123
Query: 56 LAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTL 104
LAF +SYHT NGIRHL WD G ++K++Y TG+ ++G ++ T +VL
Sbjct: 124 LAFCLSYHTFNGIRHLAWDLGLGFSLKELYATGFVVIGLSLATAVVLAF 172
>gi|338724815|ref|XP_003365026.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like isoform 3 [Equus caballus]
Length = 116
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 4 VLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVS 61
V+SI HRGTG+AL+A GL+ + + + S + V +L L ++ KF L FP+
Sbjct: 13 VMSICHRGTGIALSAGVSLFGLSALLVPGNFESHLELVKSLCLGPALIHTAKFALVFPLM 72
Query: 62 YHTANGIRHLIWDTGRALTIKKVYT 86
YHT NGIRHLIWD G+ L I ++Y
Sbjct: 73 YHTWNGIRHLIWDLGKGLKIPQLYQ 97
>gi|338724813|ref|XP_003365025.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like isoform 2 [Equus caballus]
Length = 135
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 4 VLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVS 61
V+SI HRGTG+AL+A GL+ + + + S + V +L L ++ KF L FP+
Sbjct: 32 VMSICHRGTGIALSAGVSLFGLSALLVPGNFESHLELVKSLCLGPALIHTAKFALVFPLM 91
Query: 62 YHTANGIRHLIWDTGRALTIKKVYT 86
YHT NGIRHLIWD G+ L I ++Y
Sbjct: 92 YHTWNGIRHLIWDLGKGLKIPQLYQ 116
>gi|149759773|ref|XP_001503815.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like isoform 1 [Equus caballus]
Length = 169
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 4 VLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVS 61
V+SI HRGTG+AL+A GL+ + + + S + V +L L ++ KF L FP+
Sbjct: 66 VMSICHRGTGIALSAGVSLFGLSALLVPGNFESHLELVKSLCLGPALIHTAKFALVFPLM 125
Query: 62 YHTANGIRHLIWDTGRALTIKKVYT 86
YHT NGIRHLIWD G+ L I ++Y
Sbjct: 126 YHTWNGIRHLIWDLGKGLKIPQLYQ 150
>gi|350583223|ref|XP_003481460.1| PREDICTED: hypothetical protein LOC100524676 [Sus scrofa]
Length = 135
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 60/97 (61%), Gaps = 2/97 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A GL+ + L + S + V +L L ++ KF + FP+ Y
Sbjct: 33 MSICHRGTGIALSAGVSLFGLSALLLPGNFESHLELVKSLCLGPTLIYTAKFGIVFPLMY 92
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTN 99
HT NGIRHLIWD G+ LTI ++ +G +L +L++
Sbjct: 93 HTWNGIRHLIWDLGKGLTIPQLTQSGVVVLILTVLSS 129
>gi|335775717|gb|AEH58665.1| mitochondrial succinate dehydrogenase cytochrome b560 subunit-like
protein [Equus caballus]
Length = 150
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 4 VLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVS 61
V+SI HRGTG+AL+A GL+ + + + S + V +L L ++ KF L FP+
Sbjct: 47 VMSICHRGTGIALSAGVSLFGLSALLVPGNFESHLELVKSLCLGPALIHTAKFALVFPLM 106
Query: 62 YHTANGIRHLIWDTGRALTIKKVYT 86
YHT NGIRHLIWD G+ L I ++Y
Sbjct: 107 YHTWNGIRHLIWDLGKGLKIPQLYQ 131
>gi|328909491|gb|AEB61413.1| succinate dehydrogenase cytochrome b560 subunit mitochondrial-like
protein, partial [Equus caballus]
Length = 136
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 4 VLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVS 61
V+SI HRGTG+AL+A GL+ + + + S + V +L L ++ KF L FP+
Sbjct: 33 VMSICHRGTGIALSAGVSLFGLSALLVPGNFESHLELVKSLCLGPALIHTAKFALVFPLM 92
Query: 62 YHTANGIRHLIWDTGRALTIKKVYT 86
YHT NGIRHLIWD G+ L I ++Y
Sbjct: 93 YHTWNGIRHLIWDLGKGLKIPQLYQ 117
>gi|350583225|ref|XP_003481461.1| PREDICTED: hypothetical protein LOC100524676 [Sus scrofa]
Length = 116
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 60/97 (61%), Gaps = 2/97 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A GL+ + L + S + V +L L ++ KF + FP+ Y
Sbjct: 14 MSICHRGTGIALSAGVSLFGLSALLLPGNFESHLELVKSLCLGPTLIYTAKFGIVFPLMY 73
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTN 99
HT NGIRHLIWD G+ LTI ++ +G +L +L++
Sbjct: 74 HTWNGIRHLIWDLGKGLTIPQLTQSGVVVLILTVLSS 110
>gi|149040637|gb|EDL94594.1| succinate dehydrogenase complex, subunit C, integral membrane
protein, isoform CRA_a [Rattus norvegicus]
Length = 132
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+S+ HRG+G+A++ GL+ + L + S + V +L L ++ A KF+L FP+ Y
Sbjct: 30 MSVCHRGSGIAMSGGVSLFGLSALLLPGNFESYLMLVKSLCLGPALIHAAKFVLVFPLMY 89
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTN 99
H+ NG+RHL+WD G+ L+I +V +G +L A+L++
Sbjct: 90 HSLNGVRHLMWDLGKGLSISQVQLSGVTVLVLAVLSS 126
>gi|409083993|gb|EKM84350.1| SDH3 putative [Agaricus bisporus var. burnettii JB137-S8]
Length = 179
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 62/107 (57%), Gaps = 2/107 (1%)
Query: 1 ITSVLSITHR--GTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+TSV+SI +R G G+ + Y GLA + T +SV L + L GKFILA
Sbjct: 73 LTSVVSIFNRFAGAGLGVLLYGFGLAYLVAPTTFDSVHLLTFIHELPEVVKLGGKFILAA 132
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
P S H NG+RHL WD G+ +++K VYT GY +LGAA + + LT
Sbjct: 133 PFSLHFFNGLRHLAWDAGKLMSLKGVYTGGYVVLGAATASTVYLTFF 179
>gi|53850596|ref|NP_001005534.1| succinate dehydrogenase complex, subunit C [Rattus norvegicus]
gi|51980592|gb|AAH82027.1| Succinate dehydrogenase complex, subunit C, integral membrane
protein [Rattus norvegicus]
gi|149040638|gb|EDL94595.1| succinate dehydrogenase complex, subunit C, integral membrane
protein, isoform CRA_b [Rattus norvegicus]
Length = 169
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+S+ HRG+G+A++ GL+ + L + S + V +L L ++ A KF+L FP+ Y
Sbjct: 67 MSVCHRGSGIAMSGGVSLFGLSALLLPGNFESYLMLVKSLCLGPALIHAAKFVLVFPLMY 126
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTN 99
H+ NG+RHL+WD G+ L+I +V +G +L A+L++
Sbjct: 127 HSLNGVRHLMWDLGKGLSISQVQLSGVTVLVLAVLSS 163
>gi|327289832|ref|XP_003229628.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like [Anolis carolinensis]
Length = 156
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 4 VLSITHRGTGVALT--AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVS 61
++SI+HRGTGVA++ GL+ + L + + +L+L ++ + KF LAFP+S
Sbjct: 53 MMSISHRGTGVAMSLGVSLFGLSALVLPGHFADYLDLIRSLSLGPVLIYSAKFALAFPLS 112
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTTG 88
+HT NGIRHL WD G+ I +VY +G
Sbjct: 113 FHTWNGIRHLAWDMGKGFKIPQVYQSG 139
>gi|242021634|ref|XP_002431249.1| succinate dehydrogenase, cytochrome B560 subunit [Pediculus humanus
corporis]
gi|212516503|gb|EEB18511.1| succinate dehydrogenase, cytochrome B560 subunit [Pediculus humanus
corporis]
Length = 220
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 2/96 (2%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAP-ILLAGKFILAFP 59
+ +VLSI+HR TG+ L YA+ A V L + ++ V ++ P L K L FP
Sbjct: 48 LPAVLSISHRFTGIILGGYAVTFATVSLLSS-KPMLDVVQRISHCYPGFFLIFKVGLIFP 106
Query: 60 VSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAA 95
+YH NG+RHL+WD G++L++K VY +GY ML AA
Sbjct: 107 FTYHFFNGVRHLVWDNGKSLSLKGVYISGYTMLMAA 142
>gi|344286634|ref|XP_003415062.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like [Loxodonta africana]
Length = 265
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Query: 4 VLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVS 61
V+SI HRGTG+AL+A GL+ + + + S + V +L L ++ KF L P+
Sbjct: 162 VMSICHRGTGIALSAGVSLFGLSALLIPGNFESHLELVKSLCLGPALIYTAKFALVSPLM 221
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTTGYAML 92
YHT NGIRHL+WD G+ L + ++Y +G A+L
Sbjct: 222 YHTWNGIRHLMWDLGKGLKLPQLYQSGVAVL 252
>gi|149040639|gb|EDL94596.1| succinate dehydrogenase complex, subunit C, integral membrane
protein, isoform CRA_c [Rattus norvegicus]
Length = 150
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+S+ HRG+G+A++ GL+ + L + S + V +L L ++ A KF+L FP+ Y
Sbjct: 48 MSVCHRGSGIAMSGGVSLFGLSALLLPGNFESYLMLVKSLCLGPALIHAAKFVLVFPLMY 107
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTN 99
H+ NG+RHL+WD G+ L+I +V +G +L A+L++
Sbjct: 108 HSLNGVRHLMWDLGKGLSISQVQLSGVTVLVLAVLSS 144
>gi|321465564|gb|EFX76564.1| hypothetical protein DAPPUDRAFT_36257 [Daphnia pulex]
Length = 126
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 4 VLSITHRGTGVALTAYALGLAGVG--LTTDINSVVSFVDALNLSAPILLAGKFILAFPVS 61
++S+THR TGV L GLA V L + ++ +NLS ++ GKF++ P S
Sbjct: 26 IISMTHRFTGVILCGIPFGLATVAILLPESYPYYLEILECMNLSRFMITTGKFLVVLPFS 85
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTTGY 89
+H NGIRHLIWD G LTIK+V +GY
Sbjct: 86 FHYLNGIRHLIWDLGYWLTIKEVDRSGY 113
>gi|335286616|ref|XP_003125707.2| PREDICTED: hypothetical protein LOC100524676 [Sus scrofa]
gi|290463150|sp|D0VWV4.2|C560_PIG RecName: Full=Succinate dehydrogenase cytochrome b560 subunit,
mitochondrial; AltName: Full=Succinate-ubiquinone
oxidoreductase cytochrome B large subunit; Short=CYBL;
Flags: Precursor
Length = 169
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 60/97 (61%), Gaps = 2/97 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A GL+ + L + S + V +L L ++ KF + FP+ Y
Sbjct: 67 MSICHRGTGIALSAGVSLFGLSALLLPGNFESHLELVKSLCLGPTLIYTAKFGIVFPLMY 126
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTN 99
HT NGIRHLIWD G+ LTI ++ +G +L +L++
Sbjct: 127 HTWNGIRHLIWDLGKGLTIPQLTQSGVVVLILTVLSS 163
>gi|73535958|pdb|1ZOY|C Chain C, Crystal Structure Of Mitochondrial Respiratory Complex Ii
From Porcine Heart At 2.4 Angstroms
gi|73535962|pdb|1ZP0|C Chain C, Crystal Structure Of Mitochondrial Respiratory Complex Ii
Bound With 3-Nitropropionate And
2-Thenoyltrifluoroacetone
gi|322812260|pdb|3ABV|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With
N-Biphenyl-3-Yl-2-Trifluoromethyl-Benzamide
gi|322812268|pdb|3AE1|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With N-Phenyl-2-(Trifluoromethyl)-Benzamide
gi|322812272|pdb|3AE2|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With 2-Hydroxy-N-Phenyl-Benzamide
gi|322812276|pdb|3AE3|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With 2-Nitro-N-Phenyl-Benzamide
gi|322812280|pdb|3AE4|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With 2-Iodo-N-Methyl-Benzamide
gi|322812284|pdb|3AE5|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With 2-Methyl-N-(3-Isopropoxy-Phenyl)-Benzamide
gi|322812288|pdb|3AE6|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With N-(3-Isopropoxy-Phenyl)-Phthalamicacid
gi|322812292|pdb|3AE7|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With 2-Iodo-N-(3-Isopropoxy-Phenyl)-Benzamide
gi|322812296|pdb|3AE8|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With
N-(3-Isopropoxy-Phenyl)-2-Trifluoromethylbenzamide
gi|322812300|pdb|3AE9|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With
N-(3-Pentafluorophenyloxy-Phenyl)-2-Trifluoromethyl-
Benzamide
gi|322812304|pdb|3AEA|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With
N-(3-Dimethylaminomethyl-Phenyl)-2-Trifluoromethyl-
Benzamide
gi|322812308|pdb|3AEB|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With
N-(3-Phenoxy-Phenyl)-2-Trifluoromethyl-Benzamide
gi|322812312|pdb|3AEC|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With 2-Iodo-N-(1-Methylethyl)-Benzamid
gi|322812316|pdb|3AED|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With 2-Iodo-N-Phenyl-Benzamide
gi|322812320|pdb|3AEE|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With Atpenin A5
gi|322812324|pdb|3AEF|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii With An Empty Quinone-Binding Pocket
gi|322812328|pdb|3AEG|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With N-Biphenyl-3-Yl-2-Iodo-Benzamide
gi|345531794|pdb|3SFD|C Chain C, Crystal Structure Of Porcine Mitochondrial Respiratory
Complex Ii Bound With Oxaloacetate And Pentachlorophenol
gi|345531798|pdb|3SFE|C Chain C, Crystal Structure Of Porcine Mitochondrial Respiratory
Complex Ii Bound With Oxaloacetate And Thiabendazole
Length = 140
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 61/98 (62%), Gaps = 2/98 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A GL+ + L + S + V +L L ++ KF + FP+ Y
Sbjct: 38 MSICHRGTGIALSAGVSLFGLSALLLPGNFESHLELVKSLCLGPTLIYTAKFGIVFPLMY 97
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNL 100
HT NGIRHLIWD G+ LTI ++ +G +L +L+++
Sbjct: 98 HTWNGIRHLIWDLGKGLTIPQLTQSGVVVLILTVLSSV 135
>gi|442759305|gb|JAA71811.1| Putative succinate dehydrogenase cytochrome b subunit [Ixodes
ricinus]
Length = 173
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 62/106 (58%), Gaps = 2/106 (1%)
Query: 1 ITSVLSITHR--GTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
IT++LSITHR G G+ + Y LGLA V + A+++S +L+ KF LA+
Sbjct: 67 ITTMLSITHRVTGCGLGVCVYGLGLAPFLTAHQFPYYVEAIKAMSISPVLLVPFKFALAW 126
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTL 104
+ YHT NG+RHL WD G +K++Y +GY +L +++ +L
Sbjct: 127 ALCYHTLNGMRHLAWDLGIGFQLKELYASGYTVLAISLVLGAILAF 172
>gi|170108186|ref|XP_001885302.1| succinate dehydrogenase cytochrome b560 subunit [Laccaria bicolor
S238N-H82]
gi|164639778|gb|EDR04047.1| succinate dehydrogenase cytochrome b560 subunit [Laccaria bicolor
S238N-H82]
Length = 181
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 65/109 (59%), Gaps = 6/109 (5%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGL----TTDINSVVSFVDALNLSAPILLAGKFIL 56
+T + SI +R TG L+ G + L T D VV FV L + AGK IL
Sbjct: 74 LTWIASIANRVTGAGLSVLLYGFSIAYLVAPGTFDSLHVVEFVA--GLPEVVKYAGKAIL 131
Query: 57 AFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
A P ++H+ NG+RHL WD G+ +T+K YTTGYA+LGA ++ +VLTL+
Sbjct: 132 AAPFAFHSINGLRHLSWDMGKFMTVKACYTTGYAVLGATAVSTVVLTLM 180
>gi|405117709|gb|AFR92484.1| succinate dehydrogenase [Cryptococcus neoformans var. grubii H99]
Length = 177
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 67/112 (59%), Gaps = 10/112 (8%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNL-----SAPILLAG--K 53
+T LSI HR TGVA AL ++ + ++ +V +D+ +L P G K
Sbjct: 68 LTWYLSILHRVTGVAFGG-ALYVSAMAYL--LHPLVPAIDSAHLIQLVHDLPGWFKGSAK 124
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
FI+A P ++H NG+RHL WD G+ALTIK VY TGYA+LGA +L++L L
Sbjct: 125 FIIALPFTFHCYNGLRHLNWDIGKALTIKGVYQTGYAVLGATVLSSLYLAFF 176
>gi|325303890|tpg|DAA34619.1| TPA_inf: truncated succinate dehydrogenase cytochrome b subunit
[Amblyomma variegatum]
Length = 173
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 61/104 (58%), Gaps = 7/104 (6%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
IT VLS+THR TG+ +TA Y +GL + + V + A+ +S + K LAF
Sbjct: 67 ITMVLSLTHRVTGIGMTAFVYGMGLMPLVCSHHFPHYVEALRAMEISPVLTFPVKLGLAF 126
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGY-----AMLGAAIL 97
+ YHT NG+RH+ WD G IK++Y TGY +++GAAIL
Sbjct: 127 ALCYHTFNGVRHMAWDLGLGFAIKELYATGYFVVALSLVGAAIL 170
>gi|209738020|gb|ACI69879.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
precursor [Salmo salar]
Length = 170
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 65/102 (63%), Gaps = 2/102 (1%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+ ++SITHRGTGV L+ A L + L + + + +L++ +L KF +AF
Sbjct: 63 VPMMMSITHRGTGVGLSGGILAFALLALVLPGNYPYYLDLIHSLSIGPALLGLAKFGIAF 122
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNL 100
P+SYHT NGIRHL WD+G+ T+ +VY +GY ++ +ILT++
Sbjct: 123 PLSYHTLNGIRHLFWDSGKGFTLPEVYRSGYVVIVLSILTSI 164
>gi|336371061|gb|EGN99401.1| SDHC, cytochrome b subunit of succinate dehydrogenase [Serpula
lacrymans var. lacrymans S7.3]
Length = 178
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 65/109 (59%), Gaps = 6/109 (5%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGL----TTDINSVVSFVDALNLSAPILLAGKFIL 56
+T + SI +R TG AL+A G + L T D +V FV L + + GKF+L
Sbjct: 72 LTWIGSIVNRMTGGALSALLYGFSLAYLVAPGTFDSAHIVEFVAGLPDA--VKYCGKFVL 129
Query: 57 AFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
A P ++H+ NG+RHL WD G+ LT+K Y TGYA+LGA ++ + L L+
Sbjct: 130 ALPFAFHSWNGLRHLGWDMGKFLTVKGAYNTGYAVLGATAISTIALVLM 178
>gi|417396477|gb|JAA45272.1| Putative succinate dehydrogenase cytochrome b560 subunit
mitochondrial [Desmodus rotundus]
Length = 169
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A GL+ + L S + V +L L ++ KF L FP++Y
Sbjct: 67 MSICHRGTGIALSAGVSLFGLSALVLPGSFESHLELVKSLGLGPALIHTAKFALVFPLAY 126
Query: 63 HTANGIRHLIWDTGRALTIKKVYT 86
HT NG+RHL+WD G+ L I ++Y
Sbjct: 127 HTWNGVRHLMWDLGKGLKIPQLYQ 150
>gi|336383816|gb|EGO24965.1| cytochrome b subunit of succinate dehydrogenase, Sdh3p [Serpula
lacrymans var. lacrymans S7.9]
Length = 177
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 65/109 (59%), Gaps = 6/109 (5%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGL----TTDINSVVSFVDALNLSAPILLAGKFIL 56
+T + SI +R TG AL+A G + L T D +V FV L + + GKF+L
Sbjct: 71 LTWIGSIVNRMTGGALSALLYGFSLAYLVAPGTFDSAHIVEFVAGLPDA--VKYCGKFVL 128
Query: 57 AFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
A P ++H+ NG+RHL WD G+ LT+K Y TGYA+LGA ++ + L L+
Sbjct: 129 ALPFAFHSWNGLRHLGWDMGKFLTVKGAYNTGYAVLGATAISTIALVLM 177
>gi|110590576|pdb|2H88|C Chain C, Avian Mitochondrial Respiratory Complex Ii At 1.8 Angstrom
Resolution
gi|110590580|pdb|2H88|P Chain P, Avian Mitochondrial Respiratory Complex Ii At 1.8 Angstrom
Resolution
gi|110590584|pdb|2H89|C Chain C, Avian Respiratory Complex Ii With Malonate Bound
Length = 140
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Query: 5 LSITHRGTGVALT--AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SITHRGTGVAL+ LA + L V+ V +L+LS ++ + KF L FP+SY
Sbjct: 38 MSITHRGTGVALSLGVSLFSLAALLLPEQFPHYVAVVKSLSLSPALIYSAKFALVFPLSY 97
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYAML 92
HT NGIRHL+WD G+ + +V +G +L
Sbjct: 98 HTWNGIRHLVWDMGKGFKLSQVEQSGVVVL 127
>gi|426332451|ref|XP_004027819.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial [Gorilla gorilla gorilla]
Length = 116
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A G++ + L + S + + +L L ++ KF L FP+ Y
Sbjct: 14 MSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELLKSLCLGPALIHTAKFALVFPLMY 73
Query: 63 HTANGIRHLIWDTGRALTIKKVYT 86
HT NGIRHL+WD G+ L I ++Y
Sbjct: 74 HTWNGIRHLMWDLGKGLKIPQLYQ 97
>gi|85544002|pdb|1YQ3|C Chain C, Avian Respiratory Complex Ii With Oxaloacetate And
Ubiquinone
gi|85544006|pdb|1YQ4|C Chain C, Avian Respiratory Complex Ii With 3-Nitropropionate And
Ubiquinone
Length = 141
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Query: 5 LSITHRGTGVALT--AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SITHRGTGVAL+ LA + L V+ V +L+LS ++ + KF L FP+SY
Sbjct: 38 MSITHRGTGVALSLGVSLFSLAALLLPEQFPHYVAVVKSLSLSPALIYSAKFALVFPLSY 97
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYAML 92
HT NGIRHL+WD G+ + +V +G +L
Sbjct: 98 HTWNGIRHLVWDMGKGFKLSQVEQSGVVVL 127
>gi|321251937|ref|XP_003192230.1| hypothetical protein CGB_B4140C [Cryptococcus gattii WM276]
gi|317458698|gb|ADV20443.1| Hypothetical Protein CGB_B4140C [Cryptococcus gattii WM276]
Length = 154
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 68/112 (60%), Gaps = 10/112 (8%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNL-----SAPILLAG--K 53
+T LS HR TGVA+ AL L+ + ++ +V +D+ +L P L G K
Sbjct: 45 LTWYLSSLHRITGVAVGG-ALYLSAMAYL--LHPLVPAIDSAHLIQLVHDLPGWLKGSAK 101
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
FI+A P ++H NG+RHL WD G+ALTIK VY TGYA+LGA +L++L L
Sbjct: 102 FIIALPFTFHCFNGLRHLNWDIGKALTIKGVYRTGYAVLGATVLSSLYLAFF 153
>gi|426200952|gb|EKV50875.1| succinate dehydrogenase cytochrome b subunit precursor [Agaricus
bisporus var. bisporus H97]
Length = 179
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 61/107 (57%), Gaps = 2/107 (1%)
Query: 1 ITSVLSITHR--GTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+TSV+SI +R G G+ + Y GLA + T +SV L + L GK ILA
Sbjct: 73 LTSVVSIFNRFAGAGLGVLLYGFGLAYLVAPTTFDSVHLLTFIHELPEAVKLGGKLILAA 132
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
P S H NG+RHL WD G+ +++K VYT GY +LGAA + + LT
Sbjct: 133 PFSLHFFNGLRHLAWDAGKLMSLKGVYTGGYVVLGAATASTVYLTFF 179
>gi|58258559|ref|XP_566692.1| succinate dehydrogenase (ubiquinone) [Cryptococcus neoformans var.
neoformans JEC21]
gi|134106659|ref|XP_778340.1| hypothetical protein CNBA3400 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50261043|gb|EAL23693.1| hypothetical protein CNBA3400 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57222829|gb|AAW40873.1| succinate dehydrogenase (ubiquinone), putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 221
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 66/112 (58%), Gaps = 10/112 (8%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNL-----SAPILLAG--K 53
+T LS HR TGVA AL L+ + ++ +V +D+ +L P G K
Sbjct: 112 LTWYLSSLHRITGVAFGG-ALYLSAMAYL--LHPLVPVIDSAHLIQLVHDLPGWFKGSAK 168
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
FI+A P ++H NG+RHL WD G+ALTIK VY TGYA+LGA +L++L L
Sbjct: 169 FIIALPFTFHCYNGLRHLNWDIGKALTIKGVYRTGYAVLGATVLSSLYLAFF 220
>gi|401885960|gb|EJT50038.1| hypothetical protein A1Q1_00748 [Trichosporon asahii var. asahii
CBS 2479]
Length = 179
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 66/108 (61%), Gaps = 8/108 (7%)
Query: 1 ITSVLSITHRGTGVALT------AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKF 54
+T LS HR TGVAL A A L + D ++S V +L + + GK
Sbjct: 70 LTWYLSGLHRITGVALGGLFYVGALAYCLHPLYPAIDSTHLISLVH--DLPTWVKVTGKT 127
Query: 55 ILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
++AFP+S+H+ NG+RHL+WDTG+ L++K VY +GYA+L A++ T L L
Sbjct: 128 LIAFPLSFHSFNGLRHLMWDTGKGLSMKGVYASGYAVLAASVATTLYL 175
>gi|402224871|gb|EJU04933.1| hypothetical protein DACRYDRAFT_20514 [Dacryopinax sp. DJM-731 SS1]
Length = 192
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 61/100 (61%), Gaps = 9/100 (9%)
Query: 1 ITSVLSITHRGTGV----ALTAYALG-LAG--VGLTTDINSVVSFVDALNLSAPILLAGK 53
+T V SI HR TGV AL A+A+G LA +G+ D SVV FV L L K
Sbjct: 83 LTWVASIFHRVTGVGLSLALYAFAIGYLASPVIGIPLDSASVVEFVH--GLPEWFKLTTK 140
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLG 93
I A+P +H+ NG+RHL+WD+G LT+K Y+TGY +LG
Sbjct: 141 AIFAYPFVFHSLNGVRHLVWDSGYFLTVKGAYSTGYTVLG 180
>gi|320582704|gb|EFW96921.1| succinate dehydrogenase cytochrome b subunit, mitochondrial
precursor, putative [Ogataea parapolymorpha DL-1]
Length = 170
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 65/114 (57%), Gaps = 13/114 (11%)
Query: 1 ITSVLSITHRGTGVALTA--------YAL-GLAGVGLTTDINSVVSFVDALNLSAPILLA 51
+T +LS HR TGV L A YA LAG+ D ++VS V L ++A + L
Sbjct: 61 LTWILSSFHRITGVGLAAGFYAVTCTYAFTSLAGIPF--DTATLVSVVAGLPVAAKVGL- 117
Query: 52 GKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
K +FP ++H ANG+RHL+WD G+ LT+K VY TGY +LG L LT L
Sbjct: 118 -KAAASFPFAFHVANGVRHLVWDFGKELTLKGVYRTGYVVLGFTALVGTYLTFL 170
>gi|328785048|ref|XP_393056.2| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial [Apis mellifera]
Length = 153
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 55/90 (61%), Gaps = 19/90 (21%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPV 60
+T+ LSITHR TG+ L++YA+ L G+G L P GK +LA P
Sbjct: 68 LTAFLSITHRTTGMILSSYAM-LFGIG---------------TLLIP---GGKTLLALPA 108
Query: 61 SYHTANGIRHLIWDTGRALTIKKVYTTGYA 90
+YHT NG+RHL WD G LTIK+VY+TGYA
Sbjct: 109 TYHTFNGLRHLAWDLGMFLTIKEVYSTGYA 138
>gi|225717282|gb|ACO14487.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
precursor [Esox lucius]
Length = 173
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+ ++SI+HRGTG+ L+A A L + L + + + + ++ KF +AF
Sbjct: 63 VPMMMSISHRGTGLGLSAGVSAFALLALVLPGSYPYYLDLIHSQSFGPALIGLAKFGIAF 122
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNL 100
P+SYHT NGIRHL WD+G+ I +VY +GY ++ +LT +
Sbjct: 123 PLSYHTFNGIRHLCWDSGKGFKIPEVYGSGYTVIVLTVLTTI 164
>gi|346471673|gb|AEO35681.1| hypothetical protein [Amblyomma maculatum]
Length = 173
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 58/101 (57%), Gaps = 7/101 (6%)
Query: 4 VLSITHRGTGVALTAYALGLAGVGLTTD--INSVVSFVDALNLSAPILLAGKFILAFPVS 61
VLS+THRGTG ALTA+ G+ + L V V ALN+S + + K LAF +
Sbjct: 70 VLSVTHRGTGCALTAFVYGMGFMPLVCSHHFPHYVEAVRALNISPVLTVPVKLGLAFTLC 129
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTTGYAML-----GAAIL 97
YH NG+RH+ WD G ++K + TGY +L GAA+L
Sbjct: 130 YHAFNGVRHMAWDLGLGFSLKALSATGYLVLALSFAGAAVL 170
>gi|395825349|ref|XP_003785899.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial [Otolemur garnettii]
Length = 189
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+A++ GL+ + L + S + V +L L ++ KF L FP+ Y
Sbjct: 87 MSICHRGTGIAVSTGVSLFGLSALLLPGNFESYLELVKSLGLGPALIHTAKFALVFPLMY 146
Query: 63 HTANGIRHLIWDTGRALTIKKVYT 86
HT NGIRHL+WD G+ L I ++Y
Sbjct: 147 HTWNGIRHLMWDLGKGLKIPQLYQ 170
>gi|383854646|ref|XP_003702831.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like [Megachile rotundata]
Length = 152
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 21/103 (20%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAG-KFILAFP 59
+TS+LSITHR TG+ L+ YA+ + G+G +L+ G K +LA P
Sbjct: 67 LTSLLSITHRTTGIILSTYAM-VFGLGT-------------------LLIPGAKTLLALP 106
Query: 60 VSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
+YHT NG RHL WD G LTIK+VY+TGYA+ A+++ ++L
Sbjct: 107 ATYHTLNGFRHLAWDLGMFLTIKEVYSTGYAVSVLAVISAVIL 149
>gi|390472925|ref|XP_003734537.1| PREDICTED: LOW QUALITY PROTEIN: succinate dehydrogenase cytochrome
b560 subunit, mitochondrial-like [Callithrix jacchus]
Length = 136
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+ +V+SI HRGTG+AL A G+ + L + S + V +L L ++ A KF L F
Sbjct: 30 LPTVMSIYHRGTGIALNAGVSLFGILALLLPGNFESYMELVKSLCLGPALIHAAKFALVF 89
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYT 86
P+ YHT NGI HL+WD G+ + I +Y
Sbjct: 90 PLMYHTWNGICHLMWDLGKGMKIPXLYQ 117
>gi|334324337|ref|XP_001381718.2| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like [Monodelphis domestica]
Length = 254
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HR +G+AL+A GLA + L + S V + +L+L ++ KF L P+ Y
Sbjct: 152 MSICHRASGIALSAGVSLFGLAALLLPGNFESHVELLKSLSLGPALIHTAKFALVSPLMY 211
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
HT NGIRHL WD G L I ++Y +G +L +L+++ L
Sbjct: 212 HTWNGIRHLTWDLGMGLKIPQLYQSGVVVLALTVLSSIGL 251
>gi|291226844|ref|XP_002733400.1| PREDICTED: succinate dehydrogenase complex, subunit C-like
[Saccoglossus kowalevskii]
Length = 174
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 6/94 (6%)
Query: 1 ITSVLSITHRGTG----VALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFIL 56
+T++LSITHR TG ++ +A+G+ L D V +V L L + AGK +
Sbjct: 65 LTAILSITHRATGAIMMCSIATFAVGMNV--LPHDFMFYVDWVKGLELPWWVYYAGKATI 122
Query: 57 AFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYA 90
A+P+ YH NG+RHL WD G ++ +Y +GYA
Sbjct: 123 AWPLMYHLGNGVRHLFWDMGYGFEMRNLYRSGYA 156
>gi|430814303|emb|CCJ28447.1| unnamed protein product [Pneumocystis jirovecii]
Length = 150
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 27 GLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYT 86
G D S+ S A +L KF+ AFP +YH+ NG+RHL WDTGR LT+K VY
Sbjct: 74 GWHLDSASIASMFHTWPTQAKVLT--KFVFAFPFTYHSFNGLRHLYWDTGRGLTLKGVYM 131
Query: 87 TGYAMLGAAILTNLVLTLL 105
TGY ++G + ++ L L L+
Sbjct: 132 TGYIVMGLSTISALTLALI 150
>gi|170094680|ref|XP_001878561.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647015|gb|EDR11260.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 181
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 61/104 (58%), Gaps = 6/104 (5%)
Query: 6 SITHRGTGVALTAYALGLAGVGL----TTDINSVVSFVDALNLSAPILLAGKFILAFPVS 61
SI +R TG L+ G + L T D VV FV L + AGK ILA P +
Sbjct: 79 SIANRVTGSGLSVLLYGFSIAYLVAPGTFDSAHVVEFVA--GLPEVVKYAGKAILAAPFA 136
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
+H+ NG+RHL WD G+ +T+K Y TGYA+LGA ++ +VLTL+
Sbjct: 137 FHSLNGLRHLGWDMGKFVTVKGCYRTGYAVLGATAISTVVLTLM 180
>gi|213408543|ref|XP_002175042.1| succinate dehydrogenase (ubiquinone) cytochrome b subunit
[Schizosaccharomyces japonicus yFS275]
gi|212003089|gb|EEB08749.1| succinate dehydrogenase (ubiquinone) cytochrome b subunit
[Schizosaccharomyces japonicus yFS275]
Length = 178
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 64/115 (55%), Gaps = 15/115 (13%)
Query: 1 ITSVLSITHRGTGVAL--------TAYALGLAGVGLTTDINSVVSFVDALNLSAPILL-- 50
+T LS HR TGVAL TAY L A G D N + V + P+ L
Sbjct: 69 LTWYLSSAHRITGVALSGTLYLFSTAYLLAPA-FGYGFDSNMIAHAVSQV----PVWLKV 123
Query: 51 AGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
KFI+A+P+++H NG RHL+WD+ LT+K VY TGY++L ++LT L LL
Sbjct: 124 PAKFIVAYPLAFHMFNGFRHLLWDSIHELTLKGVYRTGYSVLALSVLTAAYLALL 178
>gi|238598805|ref|XP_002394705.1| hypothetical protein MPER_05360 [Moniliophthora perniciosa FA553]
gi|215464172|gb|EEB95635.1| hypothetical protein MPER_05360 [Moniliophthora perniciosa FA553]
Length = 210
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 63/108 (58%), Gaps = 6/108 (5%)
Query: 1 ITSVLSITHRGTGVALTA----YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFIL 56
+T + SI + TG AL+A ++L V T SVV FV L + AGK IL
Sbjct: 89 LTWLWSIANCVTGAALSALLYGFSLAYPVVPDTFSSASVVEFVSGL--PEGVKYAGKAIL 146
Query: 57 AFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTL 104
A P S+H NG+ HL WD+G+ LT+K Y TGY +LGA+ ++ + LTL
Sbjct: 147 AAPFSFHAFNGLSHLTWDSGKFLTVKGAYYTGYTVLGASAISTIYLTL 194
>gi|346472803|gb|AEO36246.1| hypothetical protein [Amblyomma maculatum]
Length = 173
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 60/106 (56%), Gaps = 2/106 (1%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+TS+LS+THR TG + A Y LG+ + + V + A+++S + K LAF
Sbjct: 67 MTSMLSLTHRATGCGMAAFVYGLGVMPLVCSHHFPHYVEALRAMHISPVLTFPVKLGLAF 126
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTL 104
+ YHT NG+RH+ WD G +K++Y TGY ++ ++ T VL
Sbjct: 127 ALCYHTFNGMRHMAWDLGLGFGLKELYATGYFVIALSLATGAVLAF 172
>gi|389749576|gb|EIM90747.1| succinate dehydrogenase cytochrome b560 subunit [Stereum hirsutum
FP-91666 SS1]
Length = 175
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 63/107 (58%), Gaps = 2/107 (1%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGL-TTDINSVVSFVDALN-LSAPILLAGKFILAF 58
+T + SI +R TG AL+ G + L D S + VD + L + A K ILA
Sbjct: 69 LTWIGSIFNRATGAALSVLLYGFSIAYLVAPDTFSSKNVVDTVKKLPESVKYAAKGILAL 128
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
P ++H+ NG+RHL WD+GR LT+K Y++GYA+LGA + + L LL
Sbjct: 129 PFAFHSFNGLRHLAWDSGRFLTLKGAYSSGYAVLGATAIGTIGLVLL 175
>gi|406608082|emb|CCH40516.1| succinate dehydrogenase (ubiquinone) cytochrome b subunit precursor
[Wickerhamomyces ciferrii]
Length = 174
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 58/101 (57%), Gaps = 13/101 (12%)
Query: 1 ITSVLSITHRGTGVALT--------AYALG-LAGVGLTTDINSVVSFVDALNLSAPILLA 51
+T +S HR TGV L AYA G L +G+ D NS+ S+ +L S P A
Sbjct: 65 LTWYVSSLHRVTGVLLAGAFYGVTVAYAAGDLFNLGI--DSNSIASYFQSL--STPTQYA 120
Query: 52 GKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAML 92
K AFP H ANG+RHLIWD G+ LT+K VY TGY++L
Sbjct: 121 IKATAAFPFFLHAANGVRHLIWDAGKELTMKGVYRTGYSVL 161
>gi|210076240|ref|XP_504562.2| YALI0E29667p [Yarrowia lipolytica]
gi|199426970|emb|CAG80166.2| YALI0E29667p [Yarrowia lipolytica CLIB122]
Length = 171
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 66/113 (58%), Gaps = 11/113 (9%)
Query: 1 ITSVLSITHRGTGVAL--------TAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAG 52
+T LS HR TGVAL AYA G A +G+ D ++ A+ L A + L
Sbjct: 62 LTWYLSGLHRVTGVALGGALYALLCAYAAGPA-LGIHIDSTTLAHTFAAVPLVAKLPL-- 118
Query: 53 KFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
K ++AFP ++H NG+RHL+WD + LT+K VY TGY +LG ++L+ VL +
Sbjct: 119 KALVAFPFTFHAFNGVRHLVWDFTKELTVKGVYRTGYTVLGLSVLSAAVLAFI 171
>gi|19075212|ref|NP_587712.1| succinate dehydrogenase cytochrome B subunit [Schizosaccharomyces
pombe 972h-]
gi|74582587|sp|O74882.1|SDH3_SCHPO RecName: Full=Succinate dehydrogenase cytochrome B subunit,
mitochondrial; Flags: Precursor
gi|3646453|emb|CAA20917.1| succinate dehydrogenase (ubiquinone) cytochrome b subunit
(predicted) [Schizosaccharomyces pombe]
Length = 180
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 65/109 (59%), Gaps = 15/109 (13%)
Query: 1 ITSVLSITHRGTGV----ALTAYALG-----LAGVGL-TTDINSVVSFVDALNLSAPILL 50
+T LS HR TG L A+A+G LAG L T I+ ++ V I +
Sbjct: 71 LTWYLSSLHRITGCVVAGTLYAFAMGYLVAPLAGYSLDTATISGLIQQVPTW-----IKV 125
Query: 51 AGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTN 99
KF++++P+++H NGIRHLIWDT + L++K VY TGYA+L ++LT+
Sbjct: 126 PAKFVISYPLTFHIFNGIRHLIWDTTKELSLKGVYRTGYAVLALSVLTS 174
>gi|448122665|ref|XP_004204502.1| Piso0_000353 [Millerozyma farinosa CBS 7064]
gi|448124956|ref|XP_004205060.1| Piso0_000353 [Millerozyma farinosa CBS 7064]
gi|358249693|emb|CCE72759.1| Piso0_000353 [Millerozyma farinosa CBS 7064]
gi|358350041|emb|CCE73320.1| Piso0_000353 [Millerozyma farinosa CBS 7064]
Length = 172
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 63/113 (55%), Gaps = 11/113 (9%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSF--------VDALNLSAPILLAG 52
+T +LS HR TGV + A G G+ +T S+++ A L + +A
Sbjct: 63 LTWLLSGLHRITGVFM---AFGFYGITVTYAATSLLNIPFDSSYLVAAAAGLPLAVKVAA 119
Query: 53 KFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
K I+AFP ++H+ NG+RH++WD G+ LTIK VY TGY +LG + L LT
Sbjct: 120 KAIMAFPFAFHSFNGVRHIVWDFGKELTIKGVYRTGYIVLGLSALAGTYLTFF 172
>gi|403259922|ref|XP_003922442.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like isoform 1 [Saimiri boliviensis
boliviensis]
Length = 116
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 4 VLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVS 61
V+SI H GTG+AL+A G++ + L + S V +L L ++ A KF L FP+
Sbjct: 13 VMSICHHGTGIALSAGVSLFGISALLLPGNFESYTQLVKSLCLGPALIHAAKFALVFPLM 72
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTT 87
YH NGI HL+W+ G+ + I ++Y +
Sbjct: 73 YHAWNGICHLMWELGKGMKISQLYQS 98
>gi|256071967|ref|XP_002572309.1| succinate dehydrogenase [Schistosoma mansoni]
gi|353229795|emb|CCD75966.1| putative succinate dehydrogenase [Schistosoma mansoni]
Length = 192
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 5 LSITHRGTGVALT--AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
S HR TG+A+ ++G+ T +S++ +V ++L ++ A KFIL +P+ Y
Sbjct: 88 FSFLHRATGIAMAIVWSSVGIGAFFFTGHYDSILDYVRNMHLGTSVIAACKFILCYPLVY 147
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
H NG+RHL WD IK TTG+ LG++++ + +L +
Sbjct: 148 HYLNGMRHLAWDYAIGFPIKTCNTTGFIALGSSLVISAILACI 190
>gi|393220986|gb|EJD06471.1| succinate dehydrogenase cytochrome b560 subunit [Fomitiporia
mediterranea MF3/22]
Length = 184
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 63/110 (57%), Gaps = 15/110 (13%)
Query: 6 SITHRGTGVALTAYALG---------LAGVGLT-TDINSVVSFVDALNLSAPILLAGKFI 55
SI +R TG AL+ G L G + TD+ +VS L + AGK +
Sbjct: 80 SIANRITGTALSVLLYGFTISYVVFPLVGAPFSSTDVIQLVS-----TLPEGVKYAGKAL 134
Query: 56 LAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
LA P ++H+ NG+RHL WD+G+ LT+K Y TGYA+LGA+ +T + L LL
Sbjct: 135 LAAPFAFHSWNGLRHLAWDSGKFLTLKGAYATGYAVLGASAVTTVALVLL 184
>gi|403259924|ref|XP_003922443.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like isoform 2 [Saimiri boliviensis
boliviensis]
Length = 134
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 4 VLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVS 61
V+SI H GTG+AL+A G++ + L + S V +L L ++ A KF L FP+
Sbjct: 31 VMSICHHGTGIALSAGVSLFGISALLLPGNFESYTQLVKSLCLGPALIHAAKFALVFPLM 90
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTT 87
YH NGI HL+W+ G+ + I ++Y +
Sbjct: 91 YHAWNGICHLMWELGKGMKISQLYQS 116
>gi|2623844|gb|AAB86570.1| unknown [Schistosoma mansoni]
Length = 198
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 5 LSITHRGTGVALT--AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
S HR TG+A+ ++G+ T +S++ +V ++L ++ A KFIL +P+ Y
Sbjct: 94 FSFLHRATGIAMAIVWSSVGIGAFFFTGHYDSILDYVRNMHLGTSVIAACKFILCYPLVY 153
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
H NG+RHL WD IK TTG+ LG++++ + +L +
Sbjct: 154 HYLNGMRHLAWDYAIGFPIKTCNTTGFIALGSSLVISAILACI 196
>gi|388581332|gb|EIM21641.1| cytochrome b560 subunit of succinate dehydrogenase, partial
[Wallemia sebi CBS 633.66]
Length = 142
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 69/116 (59%), Gaps = 17/116 (14%)
Query: 1 ITSVLSITHRGTGVALTA----YALG---LAGVGLTTDINSVVSFVDALNLSAPILLAGK 53
+T + SI HR TGV L+A +A+G L VG D S++ V SAP+ K
Sbjct: 33 LTWLASIGHRVTGVGLSAGIYAFAIGYVTLPFVGAGFDSQSLIELVQ----SAPVWF--K 86
Query: 54 FILAFPV----SYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
++ PV S+H+ NGIRHL+WDTG+ LT+K Y +GYA+LG + ++ + + LL
Sbjct: 87 TLVKAPVAAAFSFHSLNGIRHLLWDTGKFLTLKGAYQSGYAVLGLSAISTIGMLLL 142
>gi|440799410|gb|ELR20461.1| succinate dehydrogenase, cytochrome b556 subunit protein
[Acanthamoeba castellanii str. Neff]
Length = 172
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 64/106 (60%), Gaps = 3/106 (2%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILL-AGKFILAFP 59
+ ++ SIT+R TG ALTA + AG + + ++DA + P+L+ K +++FP
Sbjct: 65 LPALTSITNRATGGALTA-GIYTAGALALFGAHDLPVYIDAFKAAVPLLVYPTKLLVSFP 123
Query: 60 VSYHTANGIRHLIWD-TGRALTIKKVYTTGYAMLGAAILTNLVLTL 104
YHT GIRHL WD T + LT+ +VYT+ YA++GA L L LT
Sbjct: 124 FVYHTLAGIRHLYWDYTAKGLTLPEVYTSSYALMGATALLTLGLTF 169
>gi|156376569|ref|XP_001630432.1| predicted protein [Nematostella vectensis]
gi|156217453|gb|EDO38369.1| predicted protein [Nematostella vectensis]
Length = 169
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
++LS +HR TGV +T L +GL + V+ + L P + K +LA+
Sbjct: 62 FPALLSGSHRVTGVIMTTGTTIFALCALGLPEGLEHYVNVIKGWELPRPFIFTCKTLLAW 121
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTG 88
PV YH NG+RHL WD G+ IK +Y TG
Sbjct: 122 PVCYHGLNGLRHLFWDIGKGFEIKTLYKTG 151
>gi|29420823|dbj|BAC66633.1| succinate dehydrogenase cytochrome b560 subunit [Coprinopsis
cinerea]
Length = 179
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 57/104 (54%), Gaps = 6/104 (5%)
Query: 6 SITHRGTGVALTAYALGLAGVGL----TTDINSVVSFVDALNLSAPILLAGKFILAFPVS 61
SI +R TG L+ G + L T D VV FV L + AGK ILA P S
Sbjct: 77 SIANRVTGAGLSVLLYGFSIAYLIAPGTFDSAHVVEFVAGLPDG--VKYAGKAILAAPFS 134
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
YH NG+RHL WD G+ L++K Y TGYA+LG ++ +VLT
Sbjct: 135 YHAWNGLRHLAWDAGKFLSVKGAYATGYAVLGLTGVSTVVLTFF 178
>gi|344228906|gb|EGV60792.1| cytochrome b560 subunit of succinate dehydrogenase [Candida tenuis
ATCC 10573]
Length = 172
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 58/102 (56%), Gaps = 15/102 (14%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGV----------GLTTDINSVVSFVDALNLSAPILL 50
+T VLS HR TGV + A G G+ G D+NS+++ +L L I
Sbjct: 63 LTWVLSSFHRITGVLM---AFGFYGLTCGYAASSVLGYPLDVNSLIAAFGSLPLVVKI-- 117
Query: 51 AGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAML 92
K +AFP +H+ NG+RHL+WD+GR LT+K VY TGY +L
Sbjct: 118 GAKAGMAFPFVFHSFNGLRHLLWDSGRELTVKGVYRTGYVVL 159
>gi|302675006|ref|XP_003027187.1| hypothetical protein SCHCODRAFT_86145 [Schizophyllum commune H4-8]
gi|300100873|gb|EFI92284.1| hypothetical protein SCHCODRAFT_86145 [Schizophyllum commune H4-8]
Length = 175
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 60/104 (57%), Gaps = 6/104 (5%)
Query: 6 SITHRGTGVALT----AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVS 61
SI +R TGV L+ ++LG + T D VV FV L + + AGK ILA P +
Sbjct: 74 SIANRITGVGLSVLLYGFSLGYLFLPGTFDSAHVVDFVAGLPDA--VKYAGKTILALPFA 131
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
YH NG+RHL WD G+ LT+K Y GYA+L A ++ + L LL
Sbjct: 132 YHGWNGVRHLGWDMGKFLTLKNSYRAGYAVLAATGVSTIALVLL 175
>gi|299750219|ref|XP_001836610.2| succinate dehydrogenase cytochrome b560 subunit [Coprinopsis
cinerea okayama7#130]
gi|298408800|gb|EAU85181.2| succinate dehydrogenase cytochrome b560 subunit [Coprinopsis
cinerea okayama7#130]
Length = 178
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 57/104 (54%), Gaps = 6/104 (5%)
Query: 6 SITHRGTGVALTAYALGLAGVGL----TTDINSVVSFVDALNLSAPILLAGKFILAFPVS 61
SI +R TG L+ G + L T D VV FV L + AGK ILA P S
Sbjct: 76 SIANRVTGAGLSVLLYGFSIAYLIAPGTFDSAHVVEFVAGLPDG--VKYAGKAILAAPFS 133
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
YH NG+RHL WD G+ L++K Y TGYA+LG ++ +VLT
Sbjct: 134 YHAWNGLRHLAWDAGKFLSVKGAYATGYAVLGLTGVSTVVLTFF 177
>gi|29420825|dbj|BAC66634.1| succinate dehydrogenase cytochrome b560 subunit [Coprinopsis
cinerea]
Length = 179
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 56/104 (53%), Gaps = 6/104 (5%)
Query: 6 SITHRGTGVALTAYALGLAGVGL----TTDINSVVSFVDALNLSAPILLAGKFILAFPVS 61
SI R TG L+ G + L T D VV FV L + AGK ILA P S
Sbjct: 77 SIAKRVTGAGLSVLLYGFSIAYLIAPGTFDSAHVVEFVAGLPDG--VKYAGKAILAAPFS 134
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
YH NG+RHL WD G+ L++K Y TGYA+LG ++ +VLT
Sbjct: 135 YHAWNGLRHLAWDAGKFLSVKGAYATGYAVLGLTGVSTVVLTFF 178
>gi|358055011|dbj|GAA98780.1| hypothetical protein E5Q_05468 [Mixia osmundae IAM 14324]
Length = 191
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 61/107 (57%), Gaps = 9/107 (8%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLA-----GVGLTTDINSVVSFVDALNLSAPILLAGK 53
+T + SI +R TG AL+ YA LA VG+ D S+V V +L A I AGK
Sbjct: 82 LTWLSSIANRVTGSALSGGFYAFALAYIALPAVGMPFDSASLVEIVHSLPEWAKI--AGK 139
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNL 100
F + P +H NG+RHL WD G L +K+ Y GY+++GA +L ++
Sbjct: 140 FTIGIPFWFHNFNGLRHLSWDMGFVLGLKESYVAGYSVIGATVLASI 186
>gi|196003862|ref|XP_002111798.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190585697|gb|EDV25765.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 139
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 58/103 (56%), Gaps = 4/103 (3%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTD--INSVVSFVDALNLSAPILLAGKFILAF 58
+TS++SITHR +G+ L+AYA A +++ + + L P L FI F
Sbjct: 34 LTSMMSITHRASGMILSAYAATFAIYTMSSSGTLAEHIEVWKTLPAIVPFTLKCGFI--F 91
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLV 101
P+ YH NG+RHLIWD G+ + +Y TGY ++ ++L +V
Sbjct: 92 PLYYHAINGVRHLIWDMGKGFNLPTLYKTGYTVIALSLLFGVV 134
>gi|402902571|ref|XP_003914174.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like [Papio anubis]
Length = 135
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 58/102 (56%), Gaps = 2/102 (1%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+ +V+SI RGTG+A +A G + L + S + V +L L ++ K L F
Sbjct: 29 LPAVMSIGRRGTGIAFSAGVSLFGTLALLLPGNFESYLELVKSLCLGPALIHTAKSALVF 88
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNL 100
P++YHT NGIR L+WD G+ L I VY +G A L +L+++
Sbjct: 89 PLTYHTWNGIRRLMWDLGKGLKITHVYQSGVAALVLTVLSSM 130
>gi|390594506|gb|EIN03916.1| succinate dehydrogenase cytochrome b560 subunit [Punctularia
strigosozonata HHB-11173 SS5]
Length = 180
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 66/109 (60%), Gaps = 6/109 (5%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGVGLTTDINS--VVSFVDALNLSAPILLAGKFIL 56
+T + SI +R TG AL+ Y LA + + +S VV V AL + + AGK IL
Sbjct: 74 LTWIGSIANRMTGAALSVLLYGFSLAYLVAPSTFSSANVVETVAALPDA--VKYAGKAIL 131
Query: 57 AFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
A P ++H+ NG+RHL WD G+ LT+K Y +GYA+LGA ++ + L L+
Sbjct: 132 AAPFAFHSWNGLRHLSWDIGKFLTLKGAYRSGYAVLGATAVSTIALVLM 180
>gi|328772132|gb|EGF82171.1| hypothetical protein BATDEDRAFT_36733 [Batrachochytrium
dendrobatidis JAM81]
Length = 205
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+T LS R T AL Y + LA V L ++ SF+ +L +A L GKF LA
Sbjct: 101 LTWYLSAAFRATSGALAVGFYGVALAYVFLPISSVAIASFIHSLPAAA--LFLGKFTLAA 158
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLG 93
P+S+H NG+RHLIWDT L +K VY +GY +LG
Sbjct: 159 PISFHLFNGLRHLIWDTATLLNLKGVYNSGYTVLG 193
>gi|403412680|emb|CCL99380.1| predicted protein [Fibroporia radiculosa]
Length = 177
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 60/104 (57%), Gaps = 6/104 (5%)
Query: 6 SITHRGTGVALT----AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVS 61
SI +R TG AL+ YA+ T D V+ V L + + +AGK ILA P +
Sbjct: 76 SIANRMTGAALSVLLYGYAIAYLVAPTTFDSAHVIELVAGLPDA--VKIAGKTILAAPFA 133
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
+H+ NG+RHL WD G+ L++K Y +GYA+LGA + + L LL
Sbjct: 134 FHSLNGLRHLSWDMGKFLSLKGAYQSGYAVLGATAIGTVALVLL 177
>gi|449542400|gb|EMD33379.1| hypothetical protein CERSUDRAFT_160305 [Ceriporiopsis subvermispora
B]
Length = 177
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 57/97 (58%), Gaps = 6/97 (6%)
Query: 1 ITSVLSITHRGTGVALT----AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFIL 56
+T + SI +R TGV L+ YAL T D V+ FV L + + AGK IL
Sbjct: 71 LTWIGSIANRVTGVGLSVLLYGYALAYLVAPGTFDSTHVIEFVAGLPDA--VKYAGKAIL 128
Query: 57 AFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLG 93
A P ++H+ NG+RHL WD G+ LT+K Y +GYA+LG
Sbjct: 129 AAPFAFHSWNGLRHLSWDMGKFLTLKGAYQSGYAVLG 165
>gi|50308981|ref|XP_454496.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643631|emb|CAG99583.1| KLLA0E12123p [Kluyveromyces lactis]
Length = 181
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 69/113 (61%), Gaps = 13/113 (11%)
Query: 1 ITSVLSITHRGTGV--ALTAYALGLA-------GVGLTTDINSVVSFVDALNLSAPILLA 51
+T LS HR +GV L YA+ +A G+G++T+ ++V F + + + I L
Sbjct: 71 LTWYLSSVHRVSGVFLGLAFYAVTIAFGVSTVFGLGMSTE--NLVQFYNE-KIPSWIDLT 127
Query: 52 GKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLG-AAILTNLVLT 103
K A+ ++H NGIRHLIWDTG+ LT+K VY TGYA+LG AI+ + +LT
Sbjct: 128 AKAGFAYLFAFHFGNGIRHLIWDTGKELTLKGVYRTGYAVLGLTAIMGSYLLT 180
>gi|296412597|ref|XP_002836009.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629809|emb|CAZ80166.1| unnamed protein product [Tuber melanosporum]
Length = 181
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 39/53 (73%)
Query: 53 KFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
KF + P SYH+ NGIRHL+WDTG+AL IK VY TGY +LG +++ + L ++
Sbjct: 129 KFAVTLPFSYHSWNGIRHLLWDTGKALDIKDVYRTGYVVLGLTVVSAICLAMV 181
>gi|149248046|ref|XP_001528410.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146448364|gb|EDK42752.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 189
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 60/103 (58%), Gaps = 13/103 (12%)
Query: 1 ITSVLSITHRGTGVALTA--YAL-----GLAGVGLTTDINSVVSFVDALNLSAPILLAG- 52
+T ++S HR TGVAL YAL + +G D ++VS +L P+ L
Sbjct: 79 LTWIMSSFHRITGVALAGAFYALTCTYAATSILGYHFDTQTLVSAFTSL----PVALQYG 134
Query: 53 -KFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGA 94
K + A+P YH ANGIRH+IWD G+ LTI VY TGYA+LGA
Sbjct: 135 IKALGAYPFVYHAANGIRHIIWDFGKELTIPGVYRTGYAVLGA 177
>gi|449273964|gb|EMC83291.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
[Columba livia]
Length = 271
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 49/86 (56%), Gaps = 12/86 (13%)
Query: 4 VLSITHRGTGVALT--AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVS 61
V+SITHRGTGVAL+ GLA + L ++ V +L+L ++ + KF LAFP S
Sbjct: 129 VMSITHRGTGVALSIGVSLFGLAALLLPEQFPHYLALVKSLSLGPALICSAKFALAFPFS 188
Query: 62 YHTANGIRH----------LIWDTGR 77
YHT NGIRH L+WD G
Sbjct: 189 YHTWNGIRHLRESSEQEQLLLWDRGE 214
>gi|195111348|ref|XP_002000241.1| GI22631 [Drosophila mojavensis]
gi|193916835|gb|EDW15702.1| GI22631 [Drosophila mojavensis]
Length = 229
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query: 1 ITSVLSITHRGTG--VALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+TSV+SI R +G + L + +GL + DIN++ V+ALNL A KFIL
Sbjct: 67 LTSVMSIFLRASGATLGLAVWIIGLTALLCKLDINAMAEKVEALNLGGVTFTALKFILMV 126
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGY 89
P SYH G RHLIW LT ++YTTGY
Sbjct: 127 PFSYHVMAGTRHLIWYLNMFLTKPEIYTTGY 157
>gi|392594479|gb|EIW83803.1| succinate dehydrogenase cytochrome b560 subunit [Coniophora puteana
RWD-64-598 SS2]
Length = 179
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 68/108 (62%), Gaps = 4/108 (3%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDAL-NLSAPILLAGKFILA 57
IT + SI +R TG AL YA +A + ++ DI + + V+ L +L + AGK +LA
Sbjct: 73 ITWLGSIANRVTGGALAGLLYAYSIAYL-VSPDIFASANVVETLASLPESLKYAGKALLA 131
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
P ++H+ NG+RHL WD G+ L++K + TGYA+LGA ++ + L ++
Sbjct: 132 APFAFHSWNGLRHLSWDMGKFLSLKDAHRTGYAVLGATAISTVALVMM 179
>gi|432103832|gb|ELK30669.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
[Myotis davidii]
Length = 130
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%)
Query: 21 LGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSYHTANGIRHLIWDTGRALT 80
GL+ + L + S + V +L+L ++ + KF LAFP+ YHT NGIRHL+WD G+ L
Sbjct: 46 FGLSALLLPGNFESHLELVKSLSLGPVLIHSAKFALAFPLMYHTWNGIRHLMWDLGKGLK 105
Query: 81 IKKVYTTGYAML 92
+ ++Y +G A+L
Sbjct: 106 VPQLYQSGVAVL 117
>gi|331215943|ref|XP_003320651.1| hypothetical protein PGTG_02673 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309299641|gb|EFP76232.1| hypothetical protein PGTG_02673 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 189
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 61/106 (57%), Gaps = 8/106 (7%)
Query: 6 SITHRGTGVALTA----YALGLAGV--GLTTDINSVVSFVDALNLSAPILLAGKFILAFP 59
SI +R TG AL+A YALG + + D ++VV V + A + AGK I+A P
Sbjct: 86 SIANRVTGCALSAGFYAYALGYMALPGSIPLDSDTVVQVVASSPEWAKV--AGKAIVALP 143
Query: 60 VSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
+YHT NG+RHL WD G L +K YT GY +LG ++ + L L+
Sbjct: 144 FTYHTFNGVRHLAWDMGYLLDLKTSYTAGYTVLGLTAVSTVGLALI 189
>gi|393241558|gb|EJD49080.1| cytochrome b560 subunit of succinate dehydrogenase [Auricularia
delicata TFB-10046 SS5]
Length = 181
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 62/112 (55%), Gaps = 9/112 (8%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGV-----GLTTDINSVVSFVDALNLSAPILLAGK 53
IT SI +R TGV L+ Y LA V GL D +VV V L + +GK
Sbjct: 72 ITWYGSIANRFTGVGLSVVLYGFSLAYVIAPYAGLPFDSAAVVDLVHGL--PEWVKTSGK 129
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
ILA P ++H+ NG+RHL WD G+ LT++ Y TGY++L + +VL L+
Sbjct: 130 VILAAPFAFHSLNGLRHLAWDAGKFLTVRGAYVTGYSVLAGTAIGTIVLVLM 181
>gi|345314463|ref|XP_001518823.2| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like [Ornithorhynchus anatinus]
Length = 141
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 51/85 (60%)
Query: 21 LGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSYHTANGIRHLIWDTGRALT 80
GLA + L S + V +L+L ++ KF LAFP YHT NGIRHL+WD G+ L
Sbjct: 57 FGLAALLLPGSFESQLELVKSLSLGPALIHTAKFALAFPFMYHTWNGIRHLVWDLGKGLK 116
Query: 81 IKKVYTTGYAMLGAAILTNLVLTLL 105
I +++ +G A+L +L+++ L L
Sbjct: 117 IPQLHQSGVAVLVLTVLSSVGLAAL 141
>gi|391336354|ref|XP_003742546.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like [Metaseiulus occidentalis]
Length = 166
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+T+VLSI+HR +G+ LTA Y + + + ++ + A ++S I++ KF+ +
Sbjct: 59 LTTVLSISHRISGIGLTAVVYGMAIGALASKGQFPECIAAIQAAHVSQAIIIPTKFLTSS 118
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTG 88
+H NGIRHL WD G TIK++Y TG
Sbjct: 119 AFFFHFYNGIRHLCWDMGLGFTIKELYLTG 148
>gi|126134539|ref|XP_001383794.1| succinate dehydrogenase [Scheffersomyces stipitis CBS 6054]
gi|126095943|gb|ABN65765.1| succinate dehydrogenase [Scheffersomyces stipitis CBS 6054]
Length = 160
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 61/100 (61%), Gaps = 9/100 (9%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGVGLTTDIN-----SVVSFVDALNLSAPILLAGK 53
+T VLS HR TGVA+ YAL G T+ +N SV+ V A +L + L+ K
Sbjct: 51 LTMVLSSFHRITGVAMAGAFYAL-TCGYAATSILNIPFDASVLVGVFA-SLPVAVKLSAK 108
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLG 93
++A+P ++H NGIRHL+WD G+ L+I VY TGYA+L
Sbjct: 109 ALMAYPFAFHFGNGIRHLVWDFGKELSIPGVYRTGYAVLA 148
>gi|353235037|emb|CCA67055.1| related to SDH3-cytochrome b560 subunit of respiratory complex II
[Piriformospora indica DSM 11827]
Length = 173
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 62/107 (57%), Gaps = 9/107 (8%)
Query: 6 SITHRGTGVALTA--YALGLAGV-----GLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
SI HR TGV L+ YA L+ + G+ D ++VV V L A + AGK + AF
Sbjct: 69 SIAHRITGVGLSVGMYAFFLSYLAAPVAGIPFDSSAVVELVHGLPEWAKV--AGKTVFAF 126
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
P +YH+ NG+RHL WD+ + L+ V +GYA++ AI++ L ++
Sbjct: 127 PFAYHSLNGVRHLTWDSTKLLSNAAVTRSGYAVIAGAIISTAALVMM 173
>gi|56752597|gb|AAW24512.1| SJCHGC05423 protein [Schistosoma japonicum]
gi|226489330|emb|CAX75809.1| succinate dehydrogenase complex, subunit C, integral membrane
protein [Schistosoma japonicum]
gi|226489332|emb|CAX75810.1| succinate dehydrogenase complex, subunit C, integral membrane
protein [Schistosoma japonicum]
gi|226489334|emb|CAX75811.1| succinate dehydrogenase complex, subunit C, integral membrane
protein [Schistosoma japonicum]
gi|226489336|emb|CAX75812.1| succinate dehydrogenase complex, subunit C, integral membrane
protein [Schistosoma japonicum]
gi|226489338|emb|CAX75813.1| succinate dehydrogenase complex, subunit C, integral membrane
protein [Schistosoma japonicum]
gi|226489340|emb|CAX75814.1| succinate dehydrogenase complex, subunit C, integral membrane
protein [Schistosoma japonicum]
Length = 192
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Query: 5 LSITHRGTGVALT--AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
S HR TG+A+ ++G+ T +SV+ +V ++L ++ A KF+L +P+ Y
Sbjct: 88 FSFLHRATGIAMAIVWSSVGIGAFFFTGHYDSVLDYVKNMHLGDTVITACKFVLCYPLVY 147
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
H NG+RHL WD IK TG+ LG++++ +L +
Sbjct: 148 HYLNGMRHLAWDYAIGFPIKTCNKTGFIALGSSLVVAAILACI 190
>gi|426198908|gb|EKV48833.1| SDH3 cytochrome b subunit of succinate dehydrogenase [Agaricus
bisporus var. bisporus H97]
Length = 179
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 58/104 (55%), Gaps = 6/104 (5%)
Query: 6 SITHRGTGVALTAYALGLAGVGL----TTDINSVVSFVDALNLSAPILLAGKFILAFPVS 61
SI +R TG AL+ G A L T D ++ V L S ++ K LA P S
Sbjct: 77 SIANRVTGAALSTLLYGFALAYLVAPTTFDSTHIIELVHQLPESFKYVV--KLGLAAPFS 134
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
+H NG+RHL WDTG+ L++K Y TGYA+LGA+ ++ + LT
Sbjct: 135 FHAINGLRHLAWDTGKFLSVKGAYMTGYAVLGASAVSTVYLTFF 178
>gi|409077568|gb|EKM77933.1| SDH3 cytochrome b subunit of succinate dehydrogenase [Agaricus
bisporus var. burnettii JB137-S8]
Length = 167
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 58/104 (55%), Gaps = 6/104 (5%)
Query: 6 SITHRGTGVALT----AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVS 61
SI +R TG AL+ +AL T D ++ V L S ++ K LA P S
Sbjct: 65 SIANRVTGAALSTLLYGFALAYLVAPTTFDSTHIIELVHQLPESFKYVV--KLGLAAPFS 122
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
+H NG+RHL WDTG+ L++K Y TGYA+LGA+ ++ + LT
Sbjct: 123 FHAINGLRHLAWDTGKFLSVKGAYMTGYAVLGASAVSTVYLTFF 166
>gi|255724056|ref|XP_002546957.1| succinate dehydrogenase cytochrome B subunit, mitochondrial
precursor [Candida tropicalis MYA-3404]
gi|240134848|gb|EER34402.1| succinate dehydrogenase cytochrome B subunit, mitochondrial
precursor [Candida tropicalis MYA-3404]
Length = 186
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 59/101 (58%), Gaps = 9/101 (8%)
Query: 1 ITSVLSITHRGTGVALTA--YAL-----GLAGVGLTTDINSVVSFVDALNLSAPILLAGK 53
+T +LS HR TGVA+ YAL + +G+ D ++VS L ++ + A K
Sbjct: 75 LTWILSSFHRITGVAMAGAFYALTCTFAATSILGIHFDTATLVSAFTELPVT--LQYAVK 132
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGA 94
A+P +H NGIRHL+WD G+ LTIK VY TGYA+L A
Sbjct: 133 AACAYPFVFHVGNGIRHLVWDFGKELTIKGVYRTGYAVLAA 173
>gi|395326746|gb|EJF59152.1| succinate dehydrogenase cytochrome b560 subunit [Dichomitus
squalens LYAD-421 SS1]
Length = 178
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 6 SITHRGTGVALTAYALGLAGVGL-TTDINSVVSFVDALN-LSAPILLAGKFILAFPVSYH 63
SI +R TG L+ G A L D S V+ VD ++ L + AGK ILA P ++H
Sbjct: 77 SIANRVTGAGLSVLLYGYALAYLVAPDTFSSVNVVDFIHGLPEGVKYAGKAILAAPFAFH 136
Query: 64 TANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
+ NG+RHL WD G+ LT+K Y++GYA+LG ++ + L LL
Sbjct: 137 SWNGLRHLSWDAGKFLTLKGAYSSGYAVLGLTAVSTVGLLLL 178
>gi|241950825|ref|XP_002418135.1| succinate dehydrogenase cytochrome b subunit, mitochondrial
precursor, putative [Candida dubliniensis CD36]
gi|223641474|emb|CAX43435.1| succinate dehydrogenase cytochrome b subunit, mitochondrial
precursor, putative [Candida dubliniensis CD36]
Length = 176
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 9/99 (9%)
Query: 1 ITSVLSITHRGTGVALTAYALGL-AGVGLTT------DINSVVSFVDALNLSAPILLAGK 53
+T ++S HR TGVA+ GL G T+ D +++S+ AL + A L K
Sbjct: 66 LTWIMSSFHRITGVAMAGAFYGLTCGFAATSILNIPFDTTTLISYFTALPIFAQYGL--K 123
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAML 92
I A+P +H NGIRHLIWD G+ LTI VY TGY +L
Sbjct: 124 AICAYPFVFHIGNGIRHLIWDFGKELTIPGVYRTGYVVL 162
>gi|296414660|ref|XP_002837016.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295632864|emb|CAZ81207.1| unnamed protein product [Tuber melanosporum]
Length = 182
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 63/109 (57%), Gaps = 9/109 (8%)
Query: 1 ITSVLSITHRGTGVALT----AYALGL---AGVGLTTDINSVVSFVDALNLSAPILLAGK 53
ITS++S +R TG L+ A+A+G +GL + ++ A+ + I + G
Sbjct: 73 ITSLMSGANRITGAILSTSAYAFAIGYLVAPTLGLHLESQTIAEAFGAMPDATKIGIKG- 131
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
+LA P +YH NG+RHLIWDTG+ L IK VYT GY +LG L+ + L
Sbjct: 132 -VLALPFTYHAWNGVRHLIWDTGKLLDIKGVYTGGYVVLGLTCLSTIYL 179
>gi|121996856|ref|YP_001001643.1| succinate dehydrogenase, cytochrome b subunit [Halorhodospira
halophila SL1]
gi|121588261|gb|ABM60841.1| succinate dehydrogenase subunit C [Halorhodospira halophila SL1]
Length = 129
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 10/102 (9%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPIL--LAGKFIL-- 56
+TS+LS+ HRGTGV +T +A V L + ++ + + L +L G+ +L
Sbjct: 19 LTSLLSVLHRGTGVFVT-----MAAVLLVAWVMALAAGPEYYELLTQVLGHWLGQLVLLG 73
Query: 57 -AFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAIL 97
F ++YH NGIRHL+WDT RA +K VY GY +L A++L
Sbjct: 74 ITFSLAYHLCNGIRHLVWDTVRAFELKAVYRGGYMVLAASVL 115
>gi|119385745|ref|YP_916800.1| succinate dehydrogenase, cytochrome b subunit [Paracoccus
denitrificans PD1222]
gi|119376340|gb|ABL71104.1| succinate dehydrogenase subunit C [Paracoccus denitrificans PD1222]
Length = 125
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 63/106 (59%), Gaps = 8/106 (7%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSF--VDALNLSAPILLAGKFILAF 58
+TSVLS HR +GVA + ALGLA L + +F AL LS P +A F++
Sbjct: 18 LTSVLSFGHRLSGVAQSLGALGLA-AWLMAGASGQDAFGSAQALLLSVPGRIA-LFLVTL 75
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTL 104
+ YH NG+RHL+WD+GR ++ +Y G+ ++G T+L+LTL
Sbjct: 76 ALFYHLCNGVRHLVWDSGRGFELRAIYAGGWTVVG----TSLILTL 117
>gi|392564820|gb|EIW57998.1| succinate dehydrogenase cytochrome b560 subunit [Trametes
versicolor FP-101664 SS1]
Length = 178
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 62/109 (56%), Gaps = 6/109 (5%)
Query: 1 ITSVLSITHRGTGVALT----AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFIL 56
+T + SI +R TG L+ YAL T D V+ + +L + + AGK IL
Sbjct: 72 LTWIASIANRVTGAGLSVLLYGYALAYLVAPTTFDSTHVIEIISSLPDA--VKYAGKVIL 129
Query: 57 AFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
A P ++H+ NG+RHL WD G+ LT+K Y +GYA+L A ++ + L L+
Sbjct: 130 AAPFAFHSLNGLRHLGWDMGKFLTLKGAYGSGYAVLAATAVSTVGLVLM 178
>gi|195452048|ref|XP_002073190.1| GK13994 [Drosophila willistoni]
gi|194169275|gb|EDW84176.1| GK13994 [Drosophila willistoni]
Length = 230
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 1 ITSVLSITHRGTG--VALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+TSV+SI+ R TG +AL +A+G+ G T + + ++ + I+ A KF+L F
Sbjct: 43 LTSVMSISLRMTGFFLALCVWAVGILGFFGTRSLGDWAAKLEECDCKRSIVNAAKFMLVF 102
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAIL 97
P SYH G RHL+W LT ++Y TGY L ++L
Sbjct: 103 PFSYHLVAGARHLLWHFNIFLTKPQIYATGYVALALSVL 141
>gi|68466667|ref|XP_722529.1| hypothetical protein CaO19.1480 [Candida albicans SC5314]
gi|68466950|ref|XP_722390.1| hypothetical protein CaO19.9055 [Candida albicans SC5314]
gi|46444361|gb|EAL03636.1| hypothetical protein CaO19.9055 [Candida albicans SC5314]
gi|46444509|gb|EAL03783.1| hypothetical protein CaO19.1480 [Candida albicans SC5314]
gi|238881974|gb|EEQ45612.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 176
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 1 ITSVLSITHRGTGVALTA--YAL--GLAGVGLTTDINSVVSFVDALNLSAPILLAG-KFI 55
+T ++S HR TGVA+ YAL G A + + V A G K I
Sbjct: 66 LTWIMSSFHRITGVAMAGAFYALTCGFAATSILNIPFDTTTLVSAFTTLPTFAQYGIKAI 125
Query: 56 LAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGA 94
A+P YH NGIRHL+WD G+ LTI VY TGYA+L A
Sbjct: 126 CAYPFVYHIGNGIRHLVWDFGKELTIPGVYRTGYAVLAA 164
>gi|255949166|ref|XP_002565350.1| Pc22g14260 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592367|emb|CAP98714.1| Pc22g14260 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 187
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 61/105 (58%), Gaps = 11/105 (10%)
Query: 9 HRGTGVAL--------TAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPV 60
HR TGVAL TAY L +G + S+V+ + AL L+A +LL K LA P
Sbjct: 86 HRITGVALSGTLYIWATAY-LASPALGWHLESASMVAAMGALPLAAKVLL--KTTLALPF 142
Query: 61 SYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
+YH NGIRHL+WD GR LT + TG+ ++G +I + + L L+
Sbjct: 143 TYHAMNGIRHLMWDLGRGLTNPVIIKTGWTVVGLSIASAVGLALI 187
>gi|390359912|ref|XP_782812.3| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like, partial [Strongylocentrotus
purpuratus]
Length = 130
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+TS+LSITHRGTGV LT YALGL+ L D + + AL+ +L K + +
Sbjct: 55 VTSMLSITHRGTGVGLTVGIYALGLSMSVLPHDFAHYLEMIKALSFGPSLLFLTKMAIVW 114
Query: 59 PVSYHTANGIRHLI 72
PV++H+ NG+RHL+
Sbjct: 115 PVAFHSLNGVRHLV 128
>gi|397494805|ref|XP_003818261.1| PREDICTED: LOW QUALITY PROTEIN: succinate dehydrogenase cytochrome
b560 subunit, mitochondrial-like [Pan paniscus]
Length = 135
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A G+ + L + S + V +L ++ KF L FP+ Y
Sbjct: 33 MSICHRGTGIALSAGVSLFGVLALLLPGNFESYLERVKSLCPGPALIHTAKFALIFPLMY 92
Query: 63 HTANGIRHLIWDTGRALTIKKVYT 86
HT NG+ HL WD G+ L I ++Y
Sbjct: 93 HTWNGVXHLTWDLGKGLKILQLYQ 116
>gi|11466547|ref|NP_044796.1| succinate:ubiquinone oxidoreductase subunit 3 (mitochondrion)
[Reclinomonas americana]
gi|1705531|sp|P80481.1|C560_RECAM RecName: Full=Succinate dehydrogenase cytochrome b560 subunit;
AltName: Full=Succinate dehydrogenase, subunit III
gi|2258377|gb|AAD11911.1| succinate:ubiquinone oxidoreductase subunit 3 (mitochondrion)
[Reclinomonas americana]
Length = 144
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Query: 1 ITSVLSITHRGTG----VALTAYALGLAGVGLTTDINSVVSFVDALN-LSAPILLAGKFI 55
IT+ LSI HR TG + L + L L + + S LN S + +A F
Sbjct: 34 ITNTLSIFHRITGGVLALTLCFFILILKMLNFHLSSYAFYSIAYTLNQYSGFLFIAISFF 93
Query: 56 LAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLV 101
L + YH G+RHL+WD G AL I+ VY TGY MLG A L L+
Sbjct: 94 LLLFIFYHLFAGLRHLVWDAGYALEIENVYLTGYIMLGLAFLFTLI 139
>gi|70997878|ref|XP_753671.1| succinate dehydrogenase cytochrome b560 subunit [Aspergillus
fumigatus Af293]
gi|66851307|gb|EAL91633.1| succinate dehydrogenase cytochrome b560 subunit [Aspergillus
fumigatus Af293]
gi|159126596|gb|EDP51712.1| succinate dehydrogenase cytochrome b560 subunit [Aspergillus
fumigatus A1163]
Length = 208
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 63/113 (55%), Gaps = 11/113 (9%)
Query: 1 ITSVLSITHRGTGVAL--------TAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAG 52
IT + S HR TG+AL TAY L G + S+ + AL ++A +L+ G
Sbjct: 99 ITWIGSSAHRITGIALSGSLYLFATAY-LAAPLFGWHLESASIAAAFGALPIAAKVLIKG 157
Query: 53 KFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
AFP YH NG+RHL+WD GR ++ ++V +G+ ++G +++ L L LL
Sbjct: 158 --TAAFPFVYHCLNGVRHLVWDLGRGISNQQVIKSGWTVVGLTVVSALTLALL 208
>gi|330804873|ref|XP_003290414.1| hypothetical protein DICPUDRAFT_98679 [Dictyostelium purpureum]
gi|325079465|gb|EGC33064.1| hypothetical protein DICPUDRAFT_98679 [Dictyostelium purpureum]
Length = 193
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 59/109 (54%), Gaps = 7/109 (6%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTT--DINSVVSFVDALNLSAPILL-AGKFILA 57
+ +V+SI HR TGV L LGL GV T V ++D L + P+L+ KF +A
Sbjct: 85 LPAVMSILHRVTGVFL---GLGLFGVCSTALFAPQDVTVYIDMLKTNYPLLVYPAKFCIA 141
Query: 58 FPVSYHTANGIRHLIWD-TGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
FP++YHT+ GIRHL WD T + +T +T ++G + + T
Sbjct: 142 FPLAYHTSTGIRHLFWDETQKGITTPLAESTCKIIIGIVSVATFIFTFF 190
>gi|121712948|ref|XP_001274085.1| succinate dehydrogenase cytochrome b560 subunit [Aspergillus
clavatus NRRL 1]
gi|119402238|gb|EAW12659.1| succinate dehydrogenase cytochrome b560 subunit [Aspergillus
clavatus NRRL 1]
Length = 188
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 1 ITSVLSITHRGTGVAL--------TAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAG 52
IT + S HR TGVAL TAY L G + S+V+ AL L+A +LL
Sbjct: 79 ITWIGSSLHRITGVALSGSLYLFATAY-LAAPLFGWHLESASLVAAFGALPLAAKVLL-- 135
Query: 53 KFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
K AFP YH NG+RHL+WD GR +T ++V +G+ ++G ++ L L L
Sbjct: 136 KSTAAFPFVYHCLNGVRHLVWDLGRGMTNQQVIKSGWTVVGLTAVSVLTLAFL 188
>gi|225559635|gb|EEH07917.1| succinate dehydrogenase cytochrome b560 subunit [Ajellomyces
capsulatus G186AR]
Length = 215
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 63/113 (55%), Gaps = 11/113 (9%)
Query: 1 ITSVLSITHRGTGVALT--------AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAG 52
ITSVLS+ HR TG+ L+ AYA +G D S+ + L ++A +LL
Sbjct: 99 ITSVLSLLHRNTGLLLSGPFYLFFAAYAAS-PWLGWHIDSTSMAASFGTLPVAAKVLL-- 155
Query: 53 KFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
K A P ++H NG+RHL+WD GR + K+V +G ++G +I + L+L L
Sbjct: 156 KTTAALPFTFHCINGVRHLVWDLGRGFSNKQVTKSGRTVIGLSISSALLLGFL 208
>gi|392577285|gb|EIW70414.1| hypothetical protein TREMEDRAFT_43131 [Tremella mesenterica DSM
1558]
Length = 178
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 61/112 (54%), Gaps = 10/112 (8%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNL-----SAPILLAG--K 53
+T + S +R TGVAL+ L G L ++ V +D+ +L PI L G K
Sbjct: 69 LTWIASGFNRLTGVALSGV---LYGASLIYLLHPVFPAIDSAHLIQLAHDMPIWLKGGVK 125
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
+ A P ++HT NG+RHL WD G+ LT+K Y TGY +L A ++++ L
Sbjct: 126 LLFAIPFTFHTFNGMRHLGWDMGKGLTLKATYATGYTVLAATAVSSIYLAFF 177
>gi|66820248|ref|XP_643757.1| succinate dehydrogenase [Dictyostelium discoideum AX4]
gi|74843770|sp|Q8T2T5.1|C560_DICDI RecName: Full=Succinate dehydrogenase cytochrome b560 subunit,
mitochondrial; Flags: Precursor
gi|60471884|gb|EAL69838.1| succinate dehydrogenase [Dictyostelium discoideum AX4]
Length = 192
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILL-AGKFILAFP 59
+ +V+SI HR TG+ L GLAGV L + + ++ L+ P L+ KF +A P
Sbjct: 84 LPAVMSIMHRATGICLALGITGLAGVTLFAP-HDAIHYIQLLHTQYPALVYPAKFAVALP 142
Query: 60 VSYHTANGIRHLIWD-TGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
++YH G+RH+IWD T + L+I ++ ++G +L + + + T +
Sbjct: 143 LTYHFCTGVRHIIWDETVKGLSISQIESSGKVLLAVVAVLSTIFTFV 189
>gi|325089641|gb|EGC42951.1| succinate dehydrogenase cytochrome b560 subunit [Ajellomyces
capsulatus H88]
Length = 194
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 63/113 (55%), Gaps = 11/113 (9%)
Query: 1 ITSVLSITHRGTGVALT--------AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAG 52
ITSVLS+ HR TG+ L+ AYA +G D S+ + L ++A +LL
Sbjct: 78 ITSVLSLLHRNTGLLLSGPFYLFFAAYAAS-PWLGWHIDSTSMAASFGILPVAAKVLL-- 134
Query: 53 KFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
K A P ++H NG+RHL+WD GR + K+V +G ++G +I + L+L L
Sbjct: 135 KTTAALPFTFHCINGVRHLVWDLGRGFSNKQVAKSGRTVIGLSISSALLLGFL 187
>gi|425773767|gb|EKV12100.1| Succinate dehydrogenase cytochrome b560 subunit [Penicillium
digitatum Pd1]
gi|425775979|gb|EKV14218.1| Succinate dehydrogenase cytochrome b560 subunit [Penicillium
digitatum PHI26]
Length = 188
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 61/105 (58%), Gaps = 11/105 (10%)
Query: 9 HRGTGVAL--------TAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPV 60
HR TGVAL TAY + A +G + S+V+ + AL L A +LL K LA P
Sbjct: 87 HRITGVALSGSLYLWATAYLVSPA-LGWHLESASMVAAMGALPLVAKVLL--KTTLALPF 143
Query: 61 SYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
+YH NGIRHL+WD GR LT + TG+ ++G +I + + L L+
Sbjct: 144 TYHAMNGIRHLMWDLGRGLTNPVIIKTGWTVIGLSIASAVGLALI 188
>gi|240279376|gb|EER42881.1| succinate dehydrogenase cytochrome b560 subunit [Ajellomyces
capsulatus H143]
Length = 188
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 63/113 (55%), Gaps = 11/113 (9%)
Query: 1 ITSVLSITHRGTGVALT--------AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAG 52
ITSVLS+ HR TG+ L+ AYA +G D S+ + L ++A +LL
Sbjct: 72 ITSVLSLLHRNTGLLLSGPFYLFFAAYAAS-PWLGWHIDSTSMAASFGILPVAAKVLL-- 128
Query: 53 KFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
K A P ++H NG+RHL+WD GR + K+V +G ++G +I + L+L L
Sbjct: 129 KTTAALPFTFHCINGVRHLVWDLGRGFSNKQVAKSGRTVIGLSISSALLLGFL 181
>gi|354546660|emb|CCE43392.1| hypothetical protein CPAR2_210360 [Candida parapsilosis]
Length = 188
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 58/101 (57%), Gaps = 7/101 (6%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSV----VSFVDALNLSAPILLAG--KF 54
+T +LS HR TGVA+ L T I ++ + V+A S P+ L K
Sbjct: 78 LTWLLSGLHRITGVAMAGAFYALTCTYAATSILNIPFDAATLVNAF-ASLPVWLQYGIKA 136
Query: 55 ILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAA 95
AFP ++H+ NG+RHLIWD G+ LT+K VY TGY +LGA+
Sbjct: 137 GAAFPFAFHSFNGVRHLIWDLGKELTLKGVYRTGYIVLGAS 177
>gi|358332690|dbj|GAA51323.1| succinate dehydrogenase (ubiquinone) cytochrome b subunit
[Clonorchis sinensis]
Length = 197
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 5 LSITHRGTGVA--LTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
S HR TG+A L A+G T + ++ +V L L + I+ + KF+L +P+ Y
Sbjct: 93 FSFLHRATGIAMALVWAAVGCGAFFFTGQYDEMLEYVRNLQLGSTIITSCKFVLCYPLVY 152
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTG 88
H NG+RHL WD IK TTG
Sbjct: 153 HYLNGMRHLAWDYAIGFPIKTCNTTG 178
>gi|345568551|gb|EGX51444.1| hypothetical protein AOL_s00054g143 [Arthrobotrys oligospora ATCC
24927]
Length = 220
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 58/105 (55%), Gaps = 5/105 (4%)
Query: 1 ITSVLSITHRGTGVALTA----YALGLAGVG-LTTDINSVVSFVDALNLSAPILLAGKFI 55
+T LS+T R TGVAL+ YA+G V D++ + + + A K
Sbjct: 111 LTWYLSMTTRITGVALSGVFYLYAIGYVLVSPFGVDMSVANASKKWGEFNGAVKAAVKAP 170
Query: 56 LAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNL 100
LA S+H NGIRHL+WDTGR LT++ VY TGY +LG L+ L
Sbjct: 171 LAACFSFHFWNGIRHLVWDTGRELTVRGVYRTGYGVLGLTALSTL 215
>gi|119479383|ref|XP_001259720.1| succinate dehydrogenase cytochrome b560 subunit [Neosartorya
fischeri NRRL 181]
gi|119407874|gb|EAW17823.1| succinate dehydrogenase cytochrome b560 subunit [Neosartorya
fischeri NRRL 181]
Length = 188
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 1 ITSVLSITHRGTGVAL--------TAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAG 52
IT + S HR TG+AL TAY L G + S+ + AL ++A + + G
Sbjct: 79 ITWIGSSAHRITGIALSGSLYLFATAY-LAAPLFGWHLESASIAAAFGALPIAAKVFIKG 137
Query: 53 KFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
AFP YH NG+RHL+WD GR ++ ++V +G+ ++G +++ L L LL
Sbjct: 138 --TAAFPFVYHCLNGVRHLVWDLGRGISNQQVIKSGWTVVGLTVVSALTLALL 188
>gi|114320488|ref|YP_742171.1| succinate dehydrogenase subunit C [Alkalilimnicola ehrlichii
MLHE-1]
gi|114226882|gb|ABI56681.1| succinate dehydrogenase subunit C [Alkalilimnicola ehrlichii
MLHE-1]
Length = 130
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 52/98 (53%), Gaps = 18/98 (18%)
Query: 1 ITSVLSITHRGTGVALTAYALGL--------AGVGLTTDINSVV-SFVDALNLSAPILLA 51
+TSVLSI HRG+GV L ++ L AG +N VV SF+ + L
Sbjct: 19 LTSVLSICHRGSGVVLALGSIILVWWLSALAAGPEAFATVNGVVGSFIGKVIL------- 71
Query: 52 GKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGY 89
F+ + YH NGIRHL+WDTGR ++ VY +GY
Sbjct: 72 --FLFTLALFYHLCNGIRHLVWDTGRGFELESVYRSGY 107
>gi|154281033|ref|XP_001541329.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150411508|gb|EDN06896.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 226
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 8/108 (7%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAG------VGLTTDINSVVSFVDALNLSAPILLAGKF 54
ITSVLS+ HR TG+ + L A +G D S+ + L ++A +LL K
Sbjct: 95 ITSVLSLLHRNTGLLSGPFYLFFAAYAASPWLGWHIDSTSMAASFGTLPVAAKVLL--KT 152
Query: 55 ILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
A P ++H NG+RHL+WD GR + K+V +G ++G +I + L+L
Sbjct: 153 TAALPFTFHCINGVRHLVWDLGRGFSNKQVTKSGRTVIGLSISSALLL 200
>gi|388857480|emb|CCF48988.1| related to SDH3-cytochrome b560 subunit of respiratory complex II
[Ustilago hordei]
Length = 199
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 64/115 (55%), Gaps = 17/115 (14%)
Query: 1 ITSVLSITHR--GTGVALTAYALGLAGVGLT----TDIN-----SVVSFVDALNLSAPIL 49
IT LSI +R GTG+++ YA A VG + +N S+V FV L P+
Sbjct: 86 ITWYLSIINRITGTGLSVLMYAYFSAYVGYPLFSGSSVNALSTTSLVDFVSTL----PVW 141
Query: 50 L--AGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
A K LA ++H+ NG+RHL WD G ALT+K VY+T Y ++GA ++ L L
Sbjct: 142 FKTAVKLPLALAFTFHSFNGLRHLAWDWGYALTLKGVYSTAYVVMGATAISTLAL 196
>gi|158562454|gb|ABW74134.1| succinate dehydrogenase cytochrome b560 subunit [Mucor racemosus]
Length = 180
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 1 ITSVLSITHRGTGVALT-AYALG----LAGVGLTTDINSVVSFVDALNLSAPILLAGKFI 55
IT LS HR TGVAL A+ LG +A L I++ A + A K
Sbjct: 71 ITWYLSGLHRVTGVALGGAFYLGALAYVAAPALGVTIDTASIISAATAAPFALKFAAKTT 130
Query: 56 LAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
+A P +H NG+RHL+WD + L IK VYT+GYA++GA + L L
Sbjct: 131 VAAPFVFHCLNGVRHLVWDATKMLDIKSVYTSGYAVIGATAVGTLYL 177
>gi|387015392|gb|AFJ49815.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like
[Crotalus adamanteus]
Length = 136
Score = 61.6 bits (148), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 51/90 (56%)
Query: 11 GTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSYHTANGIRH 70
G G++L L+ + L + + + + +L+ ++ + KF L+ PV+YHT NGIRH
Sbjct: 42 GVGMSLGVSLFALSALALPGQFSDYLDLIKSFSLAPALIYSAKFALSLPVTYHTWNGIRH 101
Query: 71 LIWDTGRALTIKKVYTTGYAMLGAAILTNL 100
L WD G I ++Y +G +L +L++L
Sbjct: 102 LAWDLGIGFKIPQLYQSGALVLVLTVLSSL 131
>gi|242792819|ref|XP_002482034.1| succinate dehydrogenase cytochrome b560 subunit [Talaromyces
stipitatus ATCC 10500]
gi|218718622|gb|EED18042.1| succinate dehydrogenase cytochrome b560 subunit [Talaromyces
stipitatus ATCC 10500]
Length = 188
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 27 GLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYT 86
G + S+ + AL +A L+ K LA PV++H+ NG+RHL+WDTGR LT K+V
Sbjct: 112 GWHLESASIAAAFGALPFAAKFLV--KLGLALPVTFHSFNGVRHLLWDTGRFLTNKQVIQ 169
Query: 87 TGYAMLGAAILTNLVLTLL 105
TG+ ++G + ++ L L LL
Sbjct: 170 TGWTVVGLSTISALALALL 188
>gi|344302965|gb|EGW33239.1| hypothetical protein SPAPADRAFT_60576 [Spathaspora passalidarum
NRRL Y-27907]
Length = 177
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 60/114 (52%), Gaps = 13/114 (11%)
Query: 1 ITSVLSITHRGTGVA-------LTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAG- 52
IT ++S HR TGV LT + +GL D + +V +L P++L
Sbjct: 67 ITWIMSSFHRITGVFMAGGFYLLTCTYGATSILGLPFDSSVLVGAFASL----PVVLKVG 122
Query: 53 -KFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
K I A+P YH NG+RHL+WD G+ALT VY TGYA+LGA + L L
Sbjct: 123 IKAICAYPFVYHVGNGLRHLVWDFGKALTNDGVYKTGYAVLGATAIIGSYLAFL 176
>gi|324520449|gb|ADY47640.1| Succinate dehydrogenase cytochrome b560 subunit [Ascaris suum]
Length = 142
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 4/103 (3%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVG---LTTDINSVVSFVDALNLSAPILLAGKFILA 57
+T ++S HR TG A+ A L + GVG L D + V F+ L + IL KFI+A
Sbjct: 21 MTWMVSGLHRVTGCAM-AGTLLIGGVGFSVLPLDFTTFVEFIRGLGIPWVILDTFKFIIA 79
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNL 100
FP+++HT NGIR + +D + I +Y Y +LG A L +L
Sbjct: 80 FPIAFHTLNGIRFIGFDMAKGTDIPSIYRGAYLVLGLAALISL 122
>gi|324518019|gb|ADY46982.1| Succinate dehydrogenase cytochrome b560 subunit [Ascaris suum]
Length = 150
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 4/103 (3%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVG---LTTDINSVVSFVDALNLSAPILLAGKFILA 57
+T ++S HR TG A+ A L + GVG L D + V F+ L + IL KFI+A
Sbjct: 29 MTWMVSGLHRVTGCAM-AGTLLIGGVGFSVLPLDFTTFVEFIRGLGIPWVILDTFKFIIA 87
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNL 100
FP+++HT NGIR + +D + I +Y Y +LG A L +L
Sbjct: 88 FPIAFHTLNGIRFIGFDMAKGTDIPSIYRGAYLVLGLAALISL 130
>gi|328351008|emb|CCA37408.1| hypothetical protein PP7435_Chr1-1289 [Komagataella pastoris CBS
7435]
Length = 175
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 57/107 (53%), Gaps = 15/107 (14%)
Query: 1 ITSVLSITHRGTGVALTA--YAL--GLAGVGL------TTDINSVVSFVDALNLSAPILL 50
+T +LS HR TGV L YAL G A L + DI + S L I
Sbjct: 66 LTWILSSFHRITGVGLAGGFYALTCGYAAANLLGYDFTSADIVGLYS-----QLPEYIKY 120
Query: 51 AGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAIL 97
+ K I A+P +H +NG+RHL+WD G+ LTI VY TGYA+L + L
Sbjct: 121 SVKAIAAYPFVFHISNGLRHLVWDFGKELTIPGVYRTGYAVLASTAL 167
>gi|71019831|ref|XP_760146.1| hypothetical protein UM03999.1 [Ustilago maydis 521]
gi|46099776|gb|EAK85009.1| hypothetical protein UM03999.1 [Ustilago maydis 521]
Length = 193
Score = 61.2 bits (147), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 60/107 (56%), Gaps = 4/107 (3%)
Query: 1 ITSVLSITHR--GTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
IT +LSI +R GTG++++ L G S+ FV L A A K LA
Sbjct: 89 ITWLLSIINRITGTGLSVSYAGYPLFGSAEALSSASLTDFVA--TLPAWFKTAVKAPLAL 146
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
S+H+ NG+RHL WD G ALTIK VY+T Y +LGA L+ + L L+
Sbjct: 147 AFSFHSLNGLRHLAWDWGFALTIKGVYSTAYVVLGATALSTIGLLLI 193
>gi|394986161|pdb|3VR8|C Chain C, Mitochondrial Rhodoquinol-Fumarate Reductase From The
Parasitic Nematode Ascaris Suum
gi|394986165|pdb|3VR8|G Chain G, Mitochondrial Rhodoquinol-Fumarate Reductase From The
Parasitic Nematode Ascaris Suum
gi|394986169|pdb|3VRB|C Chain C, Mitochondrial Rhodoquinol-Fumarate Reductase From The
Parasitic Nematode Ascaris Suum With The Specific
Inhibitor Flutolanil And Substrate Fumarate
gi|394986173|pdb|3VRB|G Chain G, Mitochondrial Rhodoquinol-Fumarate Reductase From The
Parasitic Nematode Ascaris Suum With The Specific
Inhibitor Flutolanil And Substrate Fumarate
gi|63253076|dbj|BAA11232.2| cytochrome b-large subunit [Ascaris suum]
Length = 188
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 4/103 (3%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVG---LTTDINSVVSFVDALNLSAPILLAGKFILA 57
+T ++S HR TG A+ A L + GVG L D + V F+ L + IL KFI+A
Sbjct: 67 MTWMVSGLHRVTGCAM-AGTLLIGGVGFSVLPLDFTTFVEFIRGLGIPWVILDTFKFIIA 125
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNL 100
FP+++HT NGIR + +D + I +Y Y +LG A L +L
Sbjct: 126 FPIAFHTLNGIRFIGFDMAKGTDIPSIYRGAYLVLGLAALISL 168
>gi|260946711|ref|XP_002617653.1| hypothetical protein CLUG_03097 [Clavispora lusitaniae ATCC 42720]
gi|238849507|gb|EEQ38971.1| hypothetical protein CLUG_03097 [Clavispora lusitaniae ATCC 42720]
Length = 180
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 59/105 (56%), Gaps = 10/105 (9%)
Query: 1 ITSVLSITHRGTGVALTAYALGL----AGVGLTT---DINSVVSFVDALNLSAPILLAGK 53
+T +LS HR TGV + GL A L + D S+V+ +L +A L K
Sbjct: 71 LTWLLSGLHRLTGVGMAGAFYGLTVTYAATSLLSVPFDSASIVTAFASLPFAAK--LGAK 128
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAML-GAAIL 97
+A+P ++H NGIRHL+WD G+ LTI VY TGY +L G A+L
Sbjct: 129 IAMAYPFAFHFFNGIRHLVWDFGKELTIPGVYRTGYLVLAGTALL 173
>gi|254567019|ref|XP_002490620.1| Putative protein of unknown function [Komagataella pastoris GS115]
gi|238030416|emb|CAY68340.1| Putative protein of unknown function [Komagataella pastoris GS115]
Length = 177
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 57/107 (53%), Gaps = 15/107 (14%)
Query: 1 ITSVLSITHRGTGVALTA--YAL--GLAGVGL------TTDINSVVSFVDALNLSAPILL 50
+T +LS HR TGV L YAL G A L + DI + S L I
Sbjct: 68 LTWILSSFHRITGVGLAGGFYALTCGYAAANLLGYDFTSADIVGLYS-----QLPEYIKY 122
Query: 51 AGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAIL 97
+ K I A+P +H +NG+RHL+WD G+ LTI VY TGYA+L + L
Sbjct: 123 SVKAIAAYPFVFHISNGLRHLVWDFGKELTIPGVYRTGYAVLASTAL 169
>gi|398393984|ref|XP_003850451.1| succinate dehydrogenase cytochrome B subunit [Zymoseptoria tritici
IPO323]
gi|339470329|gb|EGP85427.1| succinate dehydrogenase cytochrome B subunit [Zymoseptoria tritici
IPO323]
gi|347803248|gb|AEP22593.1| mitochondrial succinate dehydrogenase subunit C [Zymoseptoria
tritici]
gi|347803250|gb|AEP22594.1| mitochondrial succinate dehydrogenase subunit C [Zymoseptoria
tritici]
gi|347803252|gb|AEP22595.1| mitochondrial succinate dehydrogenase subunit C [Zymoseptoria
tritici]
Length = 187
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 66/114 (57%), Gaps = 13/114 (11%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSA-----PILLA-- 51
IT LS +R TGVA + YA GL L S+ +++ L+A P+LL
Sbjct: 78 ITWYLSALNRVTGVAASGAFYAFGL----LYLAAPSLGWHLESAALAASFGAWPVLLQVL 133
Query: 52 GKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
K ILA PV++H+ NG+RHL+WDT +T K+V TTG+ ++G ++ + L L L
Sbjct: 134 TKTILALPVTFHSLNGVRHLVWDTASMITNKQVQTTGWTVVGLSVASALGLAFL 187
>gi|347803256|gb|AEP22597.1| mitochondrial succinate dehydrogenase subunit C [Zymoseptoria
tritici]
Length = 187
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 66/114 (57%), Gaps = 13/114 (11%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSA-----PILLA-- 51
IT LS +R TGVA + YA GL L S+ +++ L+A P+LL
Sbjct: 78 ITWYLSALNRVTGVAASGAFYAFGL----LYLAAPSLGWHLESAALAASFGAWPVLLQVL 133
Query: 52 GKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
K ILA PV++H+ NG+RHL+WDT +T K+V TTG+ ++G ++ + L L L
Sbjct: 134 TKTILALPVTFHSLNGVRHLVWDTASMITNKQVQTTGWTVVGLSVASALGLAFL 187
>gi|406860337|gb|EKD13396.1| succinate dehydrogenase cytochrome b subunit [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 188
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 63/111 (56%), Gaps = 9/111 (8%)
Query: 1 ITSVLSITHRGTG--VALTAYALGLA-----GVGLTTDINSVVSFVDALNLSAPILLAGK 53
IT +LS +R TG VA+ Y GLA +G D ++ + AL ++A + K
Sbjct: 78 ITWILSSLNRVTGLTVAVPFYLFGLAYLASPALGWHLDSATLAATFGALPVAAKFGI--K 135
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTL 104
F+ A P ++H+ NG+RHL+WDTGRA + V +G+A++G ++ L L
Sbjct: 136 FLAALPFTFHSWNGVRHLVWDTGRAFKNQTVIKSGWAVVGLTAVSTLYLAF 186
>gi|347803258|gb|AEP22598.1| mitochondrial succinate dehydrogenase subunit C [Zymoseptoria
tritici]
Length = 187
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 66/114 (57%), Gaps = 13/114 (11%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSA-----PILLA-- 51
IT LS +R TGVA + YA GL L S+ +++ L+A P+LL
Sbjct: 78 ITWYLSALNRVTGVAASGAFYAFGL----LYLAAPSLGWHLESAALAASFGAWPVLLQVL 133
Query: 52 GKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
K ILA PV++H+ NG+RHL+WDT +T K+V TTG+ ++G ++ + L L L
Sbjct: 134 TKTILALPVTFHSLNGVRHLVWDTASMITNKQVQTTGWTVVGLSVASALGLAFL 187
>gi|347803254|gb|AEP22596.1| mitochondrial succinate dehydrogenase subunit C [Zymoseptoria
tritici]
Length = 187
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 64/112 (57%), Gaps = 9/112 (8%)
Query: 1 ITSVLSITHRGTGVALTA--YALGL---AGVGLTTDINSVVSFVDALNLSAPILLA--GK 53
IT LS +R TGVA + YA GL A L + S + A + P+LL K
Sbjct: 78 ITWYLSALNRVTGVAASGAFYAFGLLYLAAPSLGWHLESAA--LAASFGAWPVLLQVLTK 135
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
ILA PV++H+ NG+RHL+WDT +T K+V TTG+ ++G ++ + L L L
Sbjct: 136 TILALPVTFHSLNGVRHLVWDTASMITNKQVQTTGWTVVGLSVASALGLAFL 187
>gi|324520630|gb|ADY47681.1| Succinate dehydrogenase cytochrome b560 subunit [Ascaris suum]
Length = 192
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 58/103 (56%), Gaps = 4/103 (3%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTT---DINSVVSFVDALNLSAPILLAGKFILA 57
+T ++S HR TG A+ A L + GVG + D + V F+ L + IL KFI+A
Sbjct: 71 MTWMVSGLHRVTGCAM-AGTLLIGGVGFSVLPLDFTTFVEFIRGLGIPWVILDTFKFIIA 129
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNL 100
FP+++HT NGIR + +D + I +Y Y +LG A L +L
Sbjct: 130 FPIAFHTLNGIRFIGFDMAKGTDIPSIYRGAYLVLGLAALISL 172
>gi|325093799|gb|EGC47109.1| succinate dehydrogenase cytochrome b560 subunit [Ajellomyces
capsulatus H88]
Length = 187
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAG-------VGLTTDINSVVSFVDALNLSAPILLAGK 53
IT +LS T+R TGVAL+ A +G + S+ + L L+A L K
Sbjct: 78 ITWILSSTNRITGVALSGSLYIFASAYLVAPLLGWHLESASIAAAFAGLPLAAKFCL--K 135
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
F A P ++H+ NG RHL+WD G+ T K+V TG+ ++G + + L L L
Sbjct: 136 FAAALPFTFHSFNGCRHLVWDMGKQFTNKQVIVTGWTVVGLTVSSALALAFL 187
>gi|212535344|ref|XP_002147828.1| succinate dehydrogenase cytochrome b560 subunit [Talaromyces
marneffei ATCC 18224]
gi|210070227|gb|EEA24317.1| succinate dehydrogenase cytochrome b560 subunit [Talaromyces
marneffei ATCC 18224]
Length = 186
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 27 GLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYT 86
G + S+ + AL +A + K LA P +YH NG+RHLIWDTGR LT K+V
Sbjct: 110 GWHLESASIAAAFGALPFAAKFFV--KLGLAMPFTYHCINGVRHLIWDTGRLLTNKQVIQ 167
Query: 87 TGYAMLGAAILTNLVLTLL 105
TG+ M+G + ++ + L +
Sbjct: 168 TGWTMIGLSTISAVALAFM 186
>gi|453084121|gb|EMF12166.1| cytochrome b560 subunit of succinate dehydrogenase [Mycosphaerella
populorum SO2202]
Length = 185
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 63/112 (56%), Gaps = 9/112 (8%)
Query: 1 ITSVLSITHRGTGVALTA--YALG---LAGVGLTTDINSVVSFVDALNLSAPILL--AGK 53
IT LS +R TGVA++ Y G L L + S V + A + P+LL A K
Sbjct: 76 ITWYLSGLNRITGVAVSGAFYLYGVLYLVAPSLGWHVESAV--LAASFAAWPVLLQVATK 133
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
F LA+P +H+ NG+RHL WDT +T +KV TG+A+LG + L +L + L
Sbjct: 134 FTLAWPFMFHSFNGLRHLTWDTASMITNEKVKQTGWAVLGVSTLASLAVAFL 185
>gi|240277715|gb|EER41223.1| succinate dehydrogenase cytochrome b560 subunit [Ajellomyces
capsulatus H143]
Length = 187
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 9/112 (8%)
Query: 1 ITSVLSITHRGTGVALT------AYALGLAGV-GLTTDINSVVSFVDALNLSAPILLAGK 53
IT +LS T+R TGVAL+ A A +A + G + S+ + L L+A L K
Sbjct: 78 ITWILSSTNRITGVALSGGLYIFASAYLVAPLLGWHLESASIAAAFAGLPLAAKFCL--K 135
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
F A P ++H+ NG RHL+WD G+ T K+V TG+ ++G + + L L L
Sbjct: 136 FAAALPFTFHSFNGCRHLVWDMGKQFTNKQVIVTGWTVVGLTVSSALALAFL 187
>gi|225557168|gb|EEH05455.1| succinate dehydrogenase cytochrome b560 subunit [Ajellomyces
capsulatus G186AR]
Length = 187
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 9/112 (8%)
Query: 1 ITSVLSITHRGTGVALT------AYALGLAGV-GLTTDINSVVSFVDALNLSAPILLAGK 53
IT +LS T+R TGVAL+ A A +A + G + S+ + L L+A L K
Sbjct: 78 ITWILSSTNRITGVALSGGLYIFASAYLVAPLLGWHLESASIAAAFAGLPLAAKFCL--K 135
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
F A P ++H+ NG RHL+WD G+ T K+V TG+ ++G + + L L L
Sbjct: 136 FAAALPFTFHSFNGCRHLVWDMGKQFTNKQVIVTGWTVVGLTVSSALALAFL 187
>gi|195038263|ref|XP_001990579.1| GH19425 [Drosophila grimshawi]
gi|193894775|gb|EDV93641.1| GH19425 [Drosophila grimshawi]
Length = 170
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+TS +SI R +G L +A+GL G+ DIN + + ++ LS L KFI+
Sbjct: 32 LTSAMSILLRISGFVLGMGFWAIGLMGLFCNMDINELATKIEEFELSKNFLSFLKFIIIL 91
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLT 103
P +YH G RHLI+ L+ K +Y TGYA L ++ LT
Sbjct: 92 PFAYHMVVGTRHLIFYLNVFLSKKGIYATGYAALAMTLIVAAALT 136
>gi|241618571|ref|XP_002408353.1| succinate dehydrogenase, putative [Ixodes scapularis]
gi|215502982|gb|EEC12476.1| succinate dehydrogenase, putative [Ixodes scapularis]
Length = 132
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%)
Query: 19 YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSYHTANGIRHLIWDTGRA 78
Y LGLA V V A+++S +L+ KF LA+ + YHT NG+RHL WD G
Sbjct: 46 YGLGLAPFLTAHQFPYYVEAVKAMSISPVLLVPFKFALAWALCYHTLNGMRHLTWDLGIG 105
Query: 79 LTIKKVYTTGYAMLGAAILTNLVLTL 104
+K++Y +GY +L +++ +L
Sbjct: 106 FRLKELYASGYTVLAISLVLGAILAF 131
>gi|340377138|ref|XP_003387087.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like [Amphimedon queenslandica]
Length = 186
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+ ++LSI+HR TGV L+ +A LA + ++ + L++ ++ K LAF
Sbjct: 76 LPAMLSISHRITGVILSFDLWATTLAWLSSGKSFPQFITAIQELSVHPYLIFGCKTGLAF 135
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTL 104
+YH N RH +WD+G+ + VY TGY +L AA L+ + L L
Sbjct: 136 AFTYHFFNSFRHFMWDSGKGFQMSTVYRTGYLVLIAASLSAIGLAL 181
>gi|409048397|gb|EKM57875.1| hypothetical protein PHACADRAFT_251770 [Phanerochaete carnosa
HHB-10118-sp]
Length = 177
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 58/104 (55%), Gaps = 6/104 (5%)
Query: 6 SITHRGTGVALT----AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVS 61
SI +R TG L+ Y +G T +V+ A ++ + +AGK ILA P +
Sbjct: 76 SIANRVTGAGLSVLMYGYCIGYLVAPETFASANVIEL--AASMPEAVKIAGKTILAAPFA 133
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
+H+ NGIRHL WD + +T+K Y +GYA+L A ++ + L L+
Sbjct: 134 FHSWNGIRHLGWDMTKFITLKGAYQSGYAVLAATAVSTVALVLM 177
>gi|281206854|gb|EFA81038.1| succinate dehydrogenase [Polysphondylium pallidum PN500]
Length = 205
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 61/113 (53%), Gaps = 17/113 (15%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTT-------DINSVVSFVDALNLSAPILL-AG 52
+ ++LS+THR TG+AL GVGL T + V +++ S P L+
Sbjct: 95 MPAILSVTHRATGIAL--------GVGLATLAGLSVFGAHDVPYYIELFKQSYPSLVYPA 146
Query: 53 KFILAFPVSYHTANGIRHLIWDTG-RALTIKKVYTTGYAMLGAAILTNLVLTL 104
+F +AFP+++H GIRH+ WDT + + K TG +L A++ +L++T
Sbjct: 147 RFCVAFPITFHAFAGIRHIYWDTFLKGINTKPAEFTGMIILAASLGVSLIVTF 199
>gi|169780850|ref|XP_001824889.1| cytochrome B-560 subunit of succinate dehydrogenase [Aspergillus
oryzae RIB40]
gi|238504946|ref|XP_002383702.1| succinate dehydrogenase cytochrome b560 subunit [Aspergillus flavus
NRRL3357]
gi|83773629|dbj|BAE63756.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220689816|gb|EED46166.1| succinate dehydrogenase cytochrome b560 subunit [Aspergillus flavus
NRRL3357]
Length = 188
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 63/113 (55%), Gaps = 11/113 (9%)
Query: 1 ITSVLSITHRGTGVAL--------TAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAG 52
IT + S HR TG AL TAY L +G + SV + AL + A +LL G
Sbjct: 79 ITWIGSSFHRITGFALSGSLYLYATAY-LASPLLGWHLESASVAAAFAALPIVAKVLLKG 137
Query: 53 KFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
+A P +YH NG+RHL+WD GR +T ++V +G+ ++G ++L+ L L L
Sbjct: 138 --FMALPFTYHCFNGVRHLVWDLGRGITNQQVIKSGWTVVGLSVLSALALAFL 188
>gi|391867227|gb|EIT76477.1| succinate dehydrogenase, cytochrome b subunit [Aspergillus oryzae
3.042]
Length = 188
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 63/113 (55%), Gaps = 11/113 (9%)
Query: 1 ITSVLSITHRGTGVAL--------TAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAG 52
IT + S HR TG AL TAY L +G + SV + AL + A +LL G
Sbjct: 79 ITWIGSSFHRITGFALSGSLYLYATAY-LASPLLGWHLESASVAAAFAALPIVAKVLLKG 137
Query: 53 KFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
+A P +YH NG+RHL+WD GR +T ++V +G+ ++G ++L+ L L L
Sbjct: 138 --FMALPFTYHCFNGVRHLVWDLGRGITNQQVIKSGWTVVGLSVLSALALAFL 188
>gi|255713256|ref|XP_002552910.1| KLTH0D04312p [Lachancea thermotolerans]
gi|238934290|emb|CAR22472.1| KLTH0D04312p [Lachancea thermotolerans CBS 6340]
Length = 168
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 12/101 (11%)
Query: 1 ITSVLSITHRGTGVAL------TAYALG---LAGVGLTTDINSVVSFVDALNLSAPILLA 51
+T LS HR +GV L T A G L G+GLT++ N + + + +
Sbjct: 58 LTWYLSSLHRVSGVILAFGFFATTIAFGTSALLGLGLTSN-NLARWYHEKVPRWMDLTAK 116
Query: 52 GKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAML 92
G F A+ ++H ANG+RHLIWD G+ALT++ VYTTGYA++
Sbjct: 117 GSF--AYLFAFHFANGLRHLIWDAGKALTLRGVYTTGYAVM 155
>gi|67903612|ref|XP_682062.1| hypothetical protein AN8793.2 [Aspergillus nidulans FGSC A4]
gi|40741396|gb|EAA60586.1| hypothetical protein AN8793.2 [Aspergillus nidulans FGSC A4]
gi|67517322|gb|AAY68233.1| cytochrome B-560 subunit of succinate dehydrogenase [Emericella
nidulans]
gi|259483001|tpe|CBF78009.1| TPA: Cytochrome B-560 subunit of succinate dehydrogenasePutative
uncharacterized protein ;
[Source:UniProtKB/TrEMBL;Acc:Q5ASD7] [Aspergillus
nidulans FGSC A4]
Length = 191
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 11/110 (10%)
Query: 1 ITSVLSITHRGTGVAL--------TAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAG 52
IT +S HR TG+ L TAY L G + S+ + L L+A L
Sbjct: 82 ITWYMSALHRVTGIILSGPLYIFATAY-LAAPLFGWHLESASLAASFATLPLAAKFSL-- 138
Query: 53 KFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
K + A P +YH+ NG+RHL+WDTGR +T K+V TG+ ++G +I + L L
Sbjct: 139 KTLAALPFTYHSFNGLRHLMWDTGRGITNKQVIQTGWTVVGLSIASALYL 188
>gi|395326745|gb|EJF59151.1| hypothetical protein DICSQDRAFT_172301 [Dichomitus squalens
LYAD-421 SS1]
Length = 247
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGL-TTDINSVVSFVDALN-LSAPILLAGKFILAF 58
+T V SI R TG L G A V L D S +D ++ L + AGK +LA
Sbjct: 141 LTWVGSILSRFTGTGLAVLLYGSALVYLVAPDTFSSAQVIDFISTLPDAVKYAGKVVLAT 200
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTL 104
P +YH+ G+RH+ WD G+ L+++ Y TGYA++ +++ +V+ L
Sbjct: 201 PFAYHSLCGVRHIAWDVGKFLSLRGAYGTGYAVIAGTVISTVVMVL 246
>gi|363746951|ref|XP_003643864.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like [Gallus gallus]
Length = 138
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 5 LSITHRGTGVALT--AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SITHRGTGVAL+ LA + L V+ V +L+LS ++ + KF L FP+SY
Sbjct: 67 MSITHRGTGVALSLGVSLFSLAALLLPEQFPHYVAVVKSLSLSPALIYSAKFALVFPLSY 126
Query: 63 HTANGIRHLI 72
HT NGIRHL+
Sbjct: 127 HTWNGIRHLV 136
>gi|145237506|ref|XP_001391400.1| cytochrome B-560 subunit of succinate dehydrogenase [Aspergillus
niger CBS 513.88]
gi|134075872|emb|CAL00251.1| unnamed protein product [Aspergillus niger]
gi|350635515|gb|EHA23876.1| hypothetical protein ASPNIDRAFT_40064 [Aspergillus niger ATCC 1015]
Length = 188
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Query: 1 ITSVLSITHRGTGVALTA----YALG-LAGVGLTTDINSVVSFVDALNLSAPILLAGKFI 55
IT + S HR TG+AL+ YA LA L D+ S + L +A K
Sbjct: 79 ITWIGSSIHRITGIALSGSLYLYASAYLASPMLGWDLGSASAAAAFAALPVVAKVALKTT 138
Query: 56 LAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
+A P +YH NG+RHLIWDTG LT +V +G+ ++G + L+ L+L L
Sbjct: 139 MALPFTYHCMNGVRHLIWDTGAGLTNPQVIKSGWTVVGLSTLSALILAFL 188
>gi|358369553|dbj|GAA86167.1| succinate dehydrogenase C subunit [Aspergillus kawachii IFO 4308]
Length = 188
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Query: 1 ITSVLSITHRGTGVALTA----YALG-LAGVGLTTDINSVVSFVDALNLSAPILLAGKFI 55
IT + S HR TG+AL+ YA LA L D+ S + L +A K
Sbjct: 79 ITWIGSSIHRITGIALSGSLYLYASAYLASPMLGWDLGSASAAAAFAALPVVAKVALKTT 138
Query: 56 LAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
+A P +YH NG+RHLIWDTG LT +V +G+ ++G + L+ L+L L
Sbjct: 139 MALPFTYHCMNGVRHLIWDTGAGLTNPQVIKSGWTVVGLSTLSALILAFL 188
>gi|198455255|ref|XP_002138037.1| GA26173 [Drosophila pseudoobscura pseudoobscura]
gi|198133166|gb|EDY68595.1| GA26173 [Drosophila pseudoobscura pseudoobscura]
Length = 332
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/100 (37%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTD--INSVVSFVDALNLSAPILLAGKFILAF 58
+TSVLSI R +G ALT + GL GL + + V+ ++ ++ KF++ F
Sbjct: 154 LTSVLSILLRMSGFALTLFVWGLGLTGLFSKRTLAEWAEKVNECDVRRNVVSGMKFVMIF 213
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILT 98
P YH G RHLIW LT ++Y TGY A +LT
Sbjct: 214 PFVYHVVAGTRHLIWHLDVFLTKPQIYATGYL---AVVLT 250
>gi|150406491|ref|YP_001315099.1| succinate:cytochrome c oxidoreductase subunit 3 [Chlorokybus
atmophyticus]
gi|126507728|gb|ABO15125.1| succinate:cytochrome c oxidoreductase subunit 3 [Chlorokybus
atmophyticus]
Length = 133
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 59/104 (56%), Gaps = 8/104 (7%)
Query: 1 ITSVLSITHRGTG------VALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKF 54
+TS+LSI HR TG V LT + L + LT+ + +F+ + ++L F
Sbjct: 20 LTSMLSIFHRITGAFMATSVLLTIFLLKICNFHLTSYNFYIFAFI-LFSYYKWLILTVLF 78
Query: 55 ILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTG-YAMLGAAIL 97
+L + YH +NG+RHL WD G +L I KVY++G + ++G IL
Sbjct: 79 LLIISLHYHMSNGLRHLTWDLGLSLDIAKVYSSGRFVLVGGTIL 122
>gi|194902150|ref|XP_001980612.1| GG17249 [Drosophila erecta]
gi|190652315|gb|EDV49570.1| GG17249 [Drosophila erecta]
Length = 269
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Query: 1 ITSVLSITHRGTGVALTAYA--LGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+TS LS R +G AL+ + +G+ G+ L D+ + V+ + + +A K ++
Sbjct: 97 LTSTLSAFLRISGFALSVFVWIVGIGGLCLQGDMEGFIKKVEQCDCHGMVTMA-KLMVVM 155
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAI 96
P +YHT G RHLIW + LTI ++Y TGY + +I
Sbjct: 156 PFAYHTVAGTRHLIWYLNKFLTIPEIYATGYVAVALSI 193
>gi|426401221|ref|YP_007020193.1| Succinate dehydrogenase, cytochrome b556 subunit [Candidatus
Endolissoclinum patella L2]
gi|425857889|gb|AFX98925.1| Succinate dehydrogenase, cytochrome b556 subunit [Candidatus
Endolissoclinum patella L2]
Length = 127
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 50/97 (51%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPV 60
+TSV+SI HR TG+AL A L L + V + + L++ + + F +
Sbjct: 20 LTSVMSICHRATGIALVAGTLLLVWWIIAAAAGPEVFYANQKFLTSWLGILILFGFTCTL 79
Query: 61 SYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAIL 97
YH NGIRHLIWD G + VY +G+ L A+L
Sbjct: 80 MYHLCNGIRHLIWDAGYGFKLDNVYKSGWITLSTAVL 116
>gi|392950951|ref|ZP_10316506.1| hypothetical protein WQQ_05780 [Hydrocarboniphaga effusa AP103]
gi|391859913|gb|EIT70441.1| hypothetical protein WQQ_05780 [Hydrocarboniphaga effusa AP103]
Length = 134
Score = 58.5 bits (140), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 53/95 (55%), Gaps = 6/95 (6%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAG--VGLTTDINSVVSFV-DALNLSAPILLAGKFILA 57
+TS+LSITHR G+ LT +L + G V L ++ L +LL F +
Sbjct: 26 LTSMLSITHRLAGLILTLGSLFITGWLVALAAGPAWYGAYAGHMLAWYGQVLL---FAWS 82
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAML 92
+ YH NG+RHL+WDTGR L IK YT GYA++
Sbjct: 83 WCALYHLCNGMRHLVWDTGRGLDIKSAYTMGYAVI 117
>gi|154285510|ref|XP_001543550.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150407191|gb|EDN02732.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 187
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 9/112 (8%)
Query: 1 ITSVLSITHRGTGVALT------AYALGLAGV-GLTTDINSVVSFVDALNLSAPILLAGK 53
IT +LS T+R TGV L+ A A +A + G + S+ + L L+A L K
Sbjct: 78 ITWILSSTNRITGVVLSGGLYIFASAYLVAPLLGWHLESASIAAAFAGLPLAAKFCL--K 135
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
F A P ++H+ NG RHL+WD G+ T K++ TG+ ++G + + L L L
Sbjct: 136 FAAALPFTFHSFNGCRHLVWDMGKQFTNKQIIVTGWTVVGLTVSSALALAFL 187
>gi|397611682|gb|EJK61431.1| hypothetical protein THAOC_18084 [Thalassiosira oceanica]
Length = 219
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Query: 6 SITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAG-KFILAFPVSYHT 64
SIT+R TGV L+ A GL V L + V + A+ S ++ AG KF +AFP YH
Sbjct: 118 SITNRVTGVMLSFGAAGLGAVELVGGSGAGVDLMSAIGGSGGVMAAGAKFAVAFPFVYHY 177
Query: 65 ANGIRHLIWDTG-RALTIKKVYTTGYAMLGAAIL 97
G RHLIWDT LT V YA++G ++L
Sbjct: 178 MGGARHLIWDTKPEMLTNVDVEKATYALVGGSLL 211
>gi|261202338|ref|XP_002628383.1| succinate dehydrogenase cytochrome b560 subunit [Ajellomyces
dermatitidis SLH14081]
gi|239590480|gb|EEQ73061.1| succinate dehydrogenase cytochrome b560 subunit [Ajellomyces
dermatitidis SLH14081]
gi|239612206|gb|EEQ89193.1| succinate dehydrogenase cytochrome b560 subunit [Ajellomyces
dermatitidis ER-3]
gi|327353150|gb|EGE82007.1| succinate dehydrogenase cytochrome b560 subunit [Ajellomyces
dermatitidis ATCC 18188]
Length = 187
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 63/113 (55%), Gaps = 11/113 (9%)
Query: 1 ITSVLSITHRGTGVAL--------TAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAG 52
IT +LS +R TGVAL +AY + +G + S+V+ AL L+A + L
Sbjct: 78 ITWLLSSLNRITGVALAGGMYIFASAYLVS-PLLGWHLESASLVAAFGALPLAAKVGL-- 134
Query: 53 KFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
KF A P ++H+ NG RHLIWD G+ + K+V TG+ ++G + + L L +
Sbjct: 135 KFTAALPFTFHSFNGCRHLIWDMGKQFSNKQVIVTGWTVVGLTVTSALALAFM 187
>gi|258571015|ref|XP_002544311.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237904581|gb|EEP78982.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 204
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
Query: 17 TAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSYHTANGIRHLIWDTG 76
TAY + A VG + S+ + AL L+A A KF +A P ++H NG+RHL+WD G
Sbjct: 119 TAYLVAPA-VGWHLESMSLAAAFGALPLAA--KFAIKFGVAMPFTFHCMNGVRHLVWDFG 175
Query: 77 RALTIKKVYTTGYAMLGAAILTNLVLTLL 105
+ +T K V TG+ ++G ++ ++L L L+
Sbjct: 176 KKMTNKDVIATGWTVVGLSVASSLALALI 204
>gi|209954769|dbj|BAG80575.1| succinate dehydrogenase C subunit [Aspergillus oryzae]
gi|209954771|dbj|BAG80576.1| succinate dehydrogenase C subunit [Aspergillus oryzae]
Length = 188
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 1 ITSVLSITHRGTGVAL--------TAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAG 52
IT + S HR G AL TAY L +G + SV + AL + A +LL G
Sbjct: 79 ITWIGSSFHRIIGFALSGSLYLYATAY-LASPLLGWHLESASVAAAFAALPIVAKVLLKG 137
Query: 53 KFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
+A P +YH NG+RHL+WD GR +T ++V +G+ ++G ++L+ L L L
Sbjct: 138 --FMALPFTYHCFNGVRHLVWDLGRGITNQQVIKSGWTVVGLSVLSALALAFL 188
>gi|328860072|gb|EGG09179.1| hypothetical protein MELLADRAFT_77220 [Melampsora larici-populina
98AG31]
Length = 186
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 62/114 (54%), Gaps = 13/114 (11%)
Query: 1 ITSVLSITHRGTGVALTA----YAL---GLAGVGLTTDINSVVSFVDALNLSAPIL--LA 51
+T + SI +R +G AL+ +AL GL G+ D ++V L SAP ++
Sbjct: 77 LTWLSSIANRVSGSALSVGLYVFALSYMGLPAAGIPMDSETLVQ----LAASAPEWSKVS 132
Query: 52 GKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
K ++A P ++HT N RHL WD G + +K Y GYA++GA ++ + L L+
Sbjct: 133 AKALVALPFTFHTFNSCRHLAWDMGYFMELKSSYAAGYAVMGATAVSTVGLALI 186
>gi|198456405|ref|XP_002136333.1| GA27966 [Drosophila pseudoobscura pseudoobscura]
gi|198142684|gb|EDY71408.1| GA27966 [Drosophila pseudoobscura pseudoobscura]
Length = 235
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 1 ITSVLSITHRGTGVALT--AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+TSVLSI R +G ALT + LGL G+ + V+ ++ ++ KF++ F
Sbjct: 57 LTSVLSILLRMSGFALTLFVWGLGLTGLFSKRTLAEWAEKVNECDVRRNVVSGMKFVMIF 116
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGY 89
P YH G RHLIW LT ++Y TGY
Sbjct: 117 PFVYHVVAGTRHLIWHLDVFLTKPQIYATGY 147
>gi|294085393|ref|YP_003552153.1| succinate dehydrogenase subunit C [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292664968|gb|ADE40069.1| succinate dehydrogenase subunit C [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 123
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 1 ITSVLSITHRGTGVALTA----YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFIL 56
+TSVLSI HR TGV L L L + L D ++ + + + P+ G+F+L
Sbjct: 18 MTSVLSICHRATGVVLATGTGLVCLWLIALALGEDSFALATMI----IQHPL---GQFVL 70
Query: 57 AFPVS----YHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAIL 97
F S YH NGIRHL WD G L I +VY TG +L A ++
Sbjct: 71 -FGYSAVLFYHACNGIRHLAWDMGYGLEIPQVYATGRIVLAATVI 114
>gi|296808871|ref|XP_002844774.1| succinate dehydrogenase cytochrome b560 subunit [Arthroderma otae
CBS 113480]
gi|238844257|gb|EEQ33919.1| succinate dehydrogenase cytochrome b560 subunit [Arthroderma otae
CBS 113480]
Length = 225
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 39/56 (69%)
Query: 50 LAGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
+A KF +A P ++H NG+RHL+WD G+ LT ++V TTG+ ++G + + L L L+
Sbjct: 170 VAMKFTMALPFTFHCYNGVRHLVWDMGKQLTNQQVITTGWTVVGLTLTSALALALI 225
>gi|384486264|gb|EIE78444.1| hypothetical protein RO3G_03148 [Rhizopus delemar RA 99-880]
Length = 179
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 53 KFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
K +A P +H+ NGIRHL+WD G+ L IK VYTTGYA+L + +L L +
Sbjct: 127 KTTVAAPFVFHSLNGIRHLVWDIGKCLDIKSVYTTGYAVLAGTAVGSLYLGFM 179
>gi|149040640|gb|EDL94597.1| succinate dehydrogenase complex, subunit C, integral membrane
protein, isoform CRA_d [Rattus norvegicus]
Length = 140
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 27/95 (28%)
Query: 5 LSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSYHT 64
+S+ HRG+G+A++ G++ GL+ F+L FP+ YH+
Sbjct: 67 MSVCHRGSGIAMSG---GVSLFGLS------------------------FVLVFPLMYHS 99
Query: 65 ANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTN 99
NG+RHL+WD G+ L+I +V +G +L A+L++
Sbjct: 100 LNGVRHLMWDLGKGLSISQVQLSGVTVLVLAVLSS 134
>gi|195157702|ref|XP_002019735.1| GL12050 [Drosophila persimilis]
gi|194116326|gb|EDW38369.1| GL12050 [Drosophila persimilis]
Length = 307
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 1 ITSVLSITHRGTGVALT--AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+TSVLSI R +G ALT + LGL G+ + V+ ++ ++ KF++ F
Sbjct: 129 LTSVLSILLRMSGFALTLFVWGLGLTGLFSKRTLAEWAEKVNECDVRRNVVSGMKFVMIF 188
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGY 89
P YH G RHLIW LT ++Y TGY
Sbjct: 189 PFVYHVVAGTRHLIWHLDVFLTKPQIYATGY 219
>gi|315048699|ref|XP_003173724.1| succinate dehydrogenase cytochrome B subunit [Arthroderma gypseum
CBS 118893]
gi|311341691|gb|EFR00894.1| succinate dehydrogenase cytochrome B subunit [Arthroderma gypseum
CBS 118893]
Length = 221
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 53 KFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTL 104
KF +A P ++H NG+RHL+WD G+ LT K+V TTG+ ++G + + L L +
Sbjct: 169 KFTMALPFTFHCFNGVRHLVWDLGKQLTNKQVITTGWTVVGLTLSSALALAM 220
>gi|115400139|ref|XP_001215658.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114191324|gb|EAU33024.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 188
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Query: 48 ILLAGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
+LL G +AFP ++H NG+RHL+WD GR +T ++V +G+ ++G + L+ +VL LL
Sbjct: 133 VLLKG--TIAFPFAFHCMNGVRHLVWDMGRGITNQQVIKSGWTVVGLSALSAVVLALL 188
>gi|443697195|gb|ELT97730.1| hypothetical protein CAPTEDRAFT_226675 [Capitella teleta]
Length = 170
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 6 SITHRGTGVAL--TAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSYH 63
S+ HR TG+ + Y L D + ++ V LS I+ K I+AFP+ YH
Sbjct: 65 SLGHRFTGIGMGVALYGLSFGLFFAPGDFTTYLTAVQGFGLSPYIMFPAKAIMAFPLMYH 124
Query: 64 TANGIRHLIWDTGRALTIKKVYTTG 88
NGIRHL WD G + Y TG
Sbjct: 125 YLNGIRHLSWDAGYGYKLGTQYRTG 149
>gi|378728697|gb|EHY55156.1| succinate dehydrogenase (ubiquinone) cytochrome B subunit
[Exophiala dermatitidis NIH/UT8656]
Length = 195
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 45 SAPILL--AGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
S PIL+ A K AFP ++H NGIRHL+WDTG LT ++V TG+ ++G + LT L L
Sbjct: 133 SLPILVKVALKAFYAFPFAFHGFNGIRHLVWDTGATLTNRQVIITGWTVVGLSTLTALGL 192
Query: 103 TLL 105
T
Sbjct: 193 TFF 195
>gi|195329969|ref|XP_002031681.1| GM26134 [Drosophila sechellia]
gi|194120624|gb|EDW42667.1| GM26134 [Drosophila sechellia]
Length = 264
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 1 ITSVLSITHRGTGVALTAYA--LGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+TS LS R +G L + +G++G+ L D+ + ++ + + +A K ++
Sbjct: 97 LTSTLSAFLRISGFVLAVFVWFVGISGLCLQGDMEGYIKKLEKCDCQGMVTMA-KVMVTI 155
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAI 96
P +YHT G RHLIW + LTI ++Y TGY + AI
Sbjct: 156 PFAYHTVAGTRHLIWYLNKFLTIPEIYATGYVAVALAI 193
>gi|195499931|ref|XP_002097158.1| GE24651 [Drosophila yakuba]
gi|194183259|gb|EDW96870.1| GE24651 [Drosophila yakuba]
Length = 265
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 1 ITSVLSITHRGTGVALTAYA--LGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+TS LS R +G L+ + +G+ G+ L D+ + V+ + + +A K ++
Sbjct: 97 LTSTLSAFLRISGFVLSVFVWIVGIGGLCLQGDMEGFIKKVEQCDCHGMVTMA-KVMVVL 155
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAI 96
P +YHT G RHLIW + LTI ++Y TGY + +I
Sbjct: 156 PFAYHTVAGTRHLIWYLNKFLTIPEIYATGYVSVALSI 193
>gi|22550363|ref|NP_689350.1| succinate:cytochrome c oxidoreductase subunit 3 [Chaetosphaeridium
globosum]
gi|22417029|gb|AAM96628.1|AF494279_33 succinate:cytochrome c oxidoreductase subunit 3 [Chaetosphaeridium
globosum]
Length = 129
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 52/106 (49%), Gaps = 15/106 (14%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDIN-SVVSFV--------DALNLSAPIL-L 50
+TS LSI HR +G L + L A IN S SF D L + +L L
Sbjct: 18 LTSTLSIFHRISGAFLAFFVLSFALSMPICQINLSFYSFYKIWFYLCHDKLWVFLTVLNL 77
Query: 51 AGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAI 96
A F V YH +NGIRHL+WD G L + KVY +G ML A+
Sbjct: 78 A-----FFSVCYHMSNGIRHLLWDYGLFLDLSKVYFSGVFMLIVAV 118
>gi|195571855|ref|XP_002103916.1| GD20687 [Drosophila simulans]
gi|194199843|gb|EDX13419.1| GD20687 [Drosophila simulans]
Length = 262
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 1 ITSVLSITHRGTGVALTAYA--LGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+TS LS R +G L + +G++G+ L D+ + ++ + + +A K ++
Sbjct: 94 LTSTLSAFLRISGFVLAVFVWFVGVSGLCLQGDMEGFIKKLEKCDCHGMVTMA-KVMVTM 152
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAI 96
P +YHT G RHLIW + LTI ++Y TGY + AI
Sbjct: 153 PFAYHTVAGTRHLIWYLNKFLTIPEIYATGYVAVALAI 190
>gi|326936017|ref|XP_003214056.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like, partial [Meleagris gallopavo]
Length = 82
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 5 LSITHRGTGVALT--AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SITHRGTGVAL+ LA + L V+ V +L+L ++ + KF L FP+SY
Sbjct: 14 MSITHRGTGVALSLGVSLFSLAALLLPEQFPHYVAVVKSLSLGPALIYSAKFALVFPLSY 73
Query: 63 HTANGIRHL 71
HT NGIRHL
Sbjct: 74 HTWNGIRHL 82
>gi|21356401|ref|NP_650041.1| CG6629 [Drosophila melanogaster]
gi|7299395|gb|AAF54585.1| CG6629 [Drosophila melanogaster]
gi|19527967|gb|AAL90098.1| AT18465p [Drosophila melanogaster]
gi|220949652|gb|ACL87369.1| CG6629-PA [synthetic construct]
gi|220958876|gb|ACL91981.1| CG6629-PA [synthetic construct]
Length = 261
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 1 ITSVLSITHRGTGVALTAYA--LGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+TS LS R +G L + +G++G+ L D+ + V+ + + +A K ++
Sbjct: 97 LTSTLSAFLRISGFVLAVFVWFVGISGLCLQGDMEGFIKKVEKCDCHGMVTMA-KVMVTM 155
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGY 89
P +YHT G RHLIW + LTI ++Y TGY
Sbjct: 156 PFAYHTVAGTRHLIWYLNKFLTIPEIYATGY 186
>gi|443897587|dbj|GAC74927.1| succinate dehydrogenase, cytochrome b subunit [Pseudozyma
antarctica T-34]
Length = 194
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 55/113 (48%), Gaps = 15/113 (13%)
Query: 1 ITSVLSITHRGTGVALT---------AYALGLAGVGLTTDINSVVSFVDALNLSAPILL- 50
IT LSI +R TG L+ L G S+ FV L P+
Sbjct: 83 ITWYLSIINRITGTGLSVLLYAYFAAYAGYPLFGSAEALSSASLTDFVATL----PVWFK 138
Query: 51 -AGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
A K LA S+H+ NG+RHL WD G ALT+K VY+T Y ++GA ++ L L
Sbjct: 139 TAVKVPLALAFSFHSLNGLRHLAWDWGYALTLKGVYSTAYVVMGATAISTLAL 191
>gi|324516067|gb|ADY46410.1| Succinate dehydrogenase cytochrome b560 subunit [Ascaris suum]
Length = 121
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%)
Query: 28 LTTDINSVVSFVDALNLSAPILLAGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTT 87
L D + V F+ L + IL KFI+AFP+++HT NGIR + +D + I +Y
Sbjct: 29 LPLDFTTFVEFIRGLGIPCVILDTFKFIIAFPIAFHTLNGIRFIGFDMAKGTDIPSIYRG 88
Query: 88 GYAMLGAAILTNL 100
Y +LG A L +L
Sbjct: 89 AYLVLGLAALISL 101
>gi|296818369|ref|XP_002849521.1| succinate dehydrogenase cytochrome b560 subunit [Arthroderma otae
CBS 113480]
gi|238839974|gb|EEQ29636.1| succinate dehydrogenase cytochrome b560 subunit [Arthroderma otae
CBS 113480]
Length = 197
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLA-------GVGLTTDINSVVSFVDALNLSAPILLA 51
+TSV S R TGV L+ Y G++ G GL+++ S+ + + +L S A
Sbjct: 87 VTSVNSSLQRITGVVLSGGLYLFGISYLASSYFGWGLSSE--SLSAAMASLPWSGKA--A 142
Query: 52 GKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAIL 97
KF++A+P+ +HT N +RHL WD G+ +K V TGY G +I+
Sbjct: 143 VKFVIAWPLMFHTFNNLRHLAWDMGKGFAMKTVCQTGYLSAGMSII 188
>gi|302505419|ref|XP_003014416.1| hypothetical protein ARB_06978 [Arthroderma benhamiae CBS 112371]
gi|291178237|gb|EFE34027.1| hypothetical protein ARB_06978 [Arthroderma benhamiae CBS 112371]
Length = 197
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 33/44 (75%)
Query: 50 LAGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLG 93
+A KF +A P ++H NG+RHL+WD G+ LT ++V TTG+ ++G
Sbjct: 142 VAMKFTMALPFTFHCFNGVRHLVWDLGKQLTNQQVITTGWTVVG 185
>gi|402704048|ref|ZP_10852027.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
helvetica C9P9]
Length = 123
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 6/103 (5%)
Query: 1 ITSVLSITHRGTGVALT-AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFP 59
I+S LSI HR TGVAL A ++ + + L+ N+ + V+ + ++ A ++
Sbjct: 25 ISSTLSILHRMTGVALFFAVSILVWWLILSKYDNNYLQLVNCCVIKICLVAA-----SYA 79
Query: 60 VSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
YH NGIRHL WD G +IK V TG+ ++ +IL + L
Sbjct: 80 WFYHLCNGIRHLFWDIGYGFSIKAVNITGWCVVVCSILLTIFL 122
>gi|440632594|gb|ELR02513.1| hypothetical protein GMDG_01039 [Geomyces destructans 20631-21]
Length = 187
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 47 PIL--LAGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTL 104
PI+ +A K + P ++H NG+RHL+WDTGR T K V TG+ ++G ++L L+L
Sbjct: 126 PIVAQVATKLFFSVPFTFHAFNGVRHLVWDTGRQFTNKAVIKTGWTVIGLTAASSLYLSL 185
Query: 105 L 105
Sbjct: 186 F 186
>gi|45198725|ref|NP_985754.1| AFR207Cp [Ashbya gossypii ATCC 10895]
gi|44984735|gb|AAS53578.1| AFR207Cp [Ashbya gossypii ATCC 10895]
gi|374108985|gb|AEY97891.1| FAFR207Cp [Ashbya gossypii FDAG1]
Length = 166
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 29/37 (78%)
Query: 57 AFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLG 93
A+ ++H NGIRHLIWD GR L++K VY TGYA+LG
Sbjct: 118 AYLFAFHFGNGIRHLIWDMGRELSLKGVYRTGYAVLG 154
>gi|327300971|ref|XP_003235178.1| succinate dehydrogenase C subunit [Trichophyton rubrum CBS 118892]
gi|326462530|gb|EGD87983.1| succinate dehydrogenase C subunit [Trichophyton rubrum CBS 118892]
Length = 191
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 33/44 (75%)
Query: 50 LAGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLG 93
+A KF +A P ++H NG+RHL+WD G+ LT ++V TTG+ ++G
Sbjct: 136 VAMKFTMALPFTFHCFNGVRHLVWDLGKQLTNQQVITTGWTVVG 179
>gi|357629692|gb|EHJ78310.1| putative succinate dehydrogenase [Danaus plexippus]
Length = 210
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLT--TDINSVVSFVDALNLSAPILLAGKFILAF 58
+ ++ SI R TG+ +T YAL L+ L + + VS + + + S P++ K +L
Sbjct: 104 LPAMTSIVQRITGMIITFYALLLSSGSLFLSNGVETYVSIIQSFDFSLPMVFIIKMMLGA 163
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
P YH NGIR ++W+ G+ L+IK+VY + + + VLTLL
Sbjct: 164 PFVYHYFNGIRFVMWNAGKWLSIKEVYDSA----KKSFVATAVLTLL 206
>gi|363754177|ref|XP_003647304.1| hypothetical protein Ecym_6091 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890941|gb|AET40487.1| hypothetical protein Ecym_6091 [Eremothecium cymbalariae
DBVPG#7215]
Length = 168
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 56/107 (52%), Gaps = 24/107 (22%)
Query: 1 ITSVLSITHRGTGV--ALTAYALGLA-------GVGLTTDI------NSVVSFVDALNLS 45
+T LS HR +GV YA+ +A +GLTT+ N V ++ D
Sbjct: 58 LTWYLSSLHRISGVLMGFGFYAVTIAFGFSSLLDLGLTTEQLTEWYHNKVPTWADY---- 113
Query: 46 APILLAGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAML 92
+ AG ++ AF H NGIRHLIWD G+ LT+K VY TGYA+L
Sbjct: 114 -SVKGAGAYLFAF----HFGNGIRHLIWDMGKELTLKGVYRTGYAVL 155
>gi|67459555|ref|YP_247179.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia felis
URRWXCal2]
gi|75536045|sp|Q4UKC1.1|DHSC_RICFE RecName: Full=Succinate dehydrogenase cytochrome b556 subunit;
Short=Cytochrome b-556
gi|67005088|gb|AAY62014.1| Succinate dehydrogenase cytochrome b-556 subunit [Rickettsia felis
URRWXCal2]
Length = 124
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 6/103 (5%)
Query: 1 ITSVLSITHRGTGVALT-AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFP 59
I+S LSI HR TGVAL A ++ + L+ N+ + F + + I L +++
Sbjct: 25 ISSTLSILHRMTGVALFFAVSILAWWLILSKYDNNYLQFANCCIIK--ICLVA---VSYA 79
Query: 60 VSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
YH NGIRHL WD G +IK V TG+ ++ +IL ++L
Sbjct: 80 WFYHLCNGIRHLFWDIGYGFSIKAVNITGWCVVVCSILLTMLL 122
>gi|410074079|ref|XP_003954622.1| hypothetical protein KAFR_0A00490 [Kazachstania africana CBS 2517]
gi|372461204|emb|CCF55487.1| hypothetical protein KAFR_0A00490 [Kazachstania africana CBS 2517]
Length = 177
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 1 ITSVLSITHRGTGVAL------TAYALGLAGVGLTTDINSVVSFVDALNLSAPILLA--G 52
I VLS HR TG+ L LG++ + DI S D P +
Sbjct: 67 IPWVLSALHRITGIYLGLIFFSCTILLGVSSI-FNLDI-STKKMKDWYKRYIPTYASVLN 124
Query: 53 KFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAIL 97
+ +L++ VS+H+ NGIRHL+WDTGR L+ + V TGY ++G + L
Sbjct: 125 RILLSYFVSFHSFNGIRHLVWDTGRQLSNQGVIRTGYVVIGLSTL 169
>gi|302667796|ref|XP_003025478.1| hypothetical protein TRV_00347 [Trichophyton verrucosum HKI 0517]
gi|291189589|gb|EFE44867.1| hypothetical protein TRV_00347 [Trichophyton verrucosum HKI 0517]
Length = 191
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 31/41 (75%)
Query: 53 KFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLG 93
KF +A P ++H NG+RHL+WD G+ LT ++V TTG+ ++G
Sbjct: 139 KFTMALPFTFHCFNGVRHLVWDLGKQLTNQQVITTGWTVVG 179
>gi|195389540|ref|XP_002053434.1| GJ23876 [Drosophila virilis]
gi|194151520|gb|EDW66954.1| GJ23876 [Drosophila virilis]
Length = 269
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 1 ITSVLSITHRGTG--VALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+TSV+SI R +G + + + +GL G+ D+N++ ++ + S + K +
Sbjct: 113 LTSVMSIFLRISGFILGIGIWTIGLTGLLCDIDVNAMAEKIEKCDCSRTVFNMLKLFIII 172
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYA 90
P +YH G RHLIW L+ +++Y TGYA
Sbjct: 173 PFAYHIVAGTRHLIWHLNVFLSKREIYATGYA 204
>gi|328876220|gb|EGG24583.1| succinate dehydrogenase [Dictyostelium fasciculatum]
Length = 216
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 68/128 (53%), Gaps = 27/128 (21%)
Query: 3 SVLSITHRGTGVALTAYALGLAGVGLT-TDINSVVSFVDALNLSAPILLAGKFILAFPVS 61
++LSITHR TG+A+ GLAG+ +T TDI + L S +++ KF +AFPV+
Sbjct: 86 AILSITHRATGIAMGLGLFGLAGLAITGTDIPLFIEQFKTLYPS--LVIPTKFCVAFPVA 143
Query: 62 YHTANGIRHLI-----------------------WD-TGRALTIKKVYTTGYAMLGAAIL 97
+H+ +G+RHL+ WD T + + +K T+G+ ++G A
Sbjct: 144 FHSLSGVRHLVCHCHHDHSDNNWFIQFPNTNIIFWDATLKGIEVKSAETSGWIIVGVATA 203
Query: 98 TNLVLTLL 105
+LVL+ +
Sbjct: 204 ISLVLSFV 211
>gi|294655076|ref|XP_457157.2| DEHA2B04488p [Debaryomyces hansenii CBS767]
gi|199429671|emb|CAG85151.2| DEHA2B04488p [Debaryomyces hansenii CBS767]
Length = 147
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 1 ITSVLSITHRGTGVALTA--YAL--GLAGVGLTTDINSVVSFVDAL-NLSAPILLAGKFI 55
+T V+S HR TGV + + YAL G A + + + V A L + LA K
Sbjct: 38 LTMVMSGLHRVTGVFMASGFYALTCGYAAASILSIPFDAATLVGAFAGLPVAVKLAAKAA 97
Query: 56 LAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGY 89
+A+P YH NG+RH+IWD G+ LTIK VY TGY
Sbjct: 98 MAYPFVYHAFNGVRHIIWDFGKELTIKGVYRTGY 131
>gi|326468741|gb|EGD92750.1| succinate dehydrogenase C subunit [Trichophyton tonsurans CBS
112818]
gi|326481350|gb|EGE05360.1| succinate dehydrogenase cytochrome b560 subunit [Trichophyton
equinum CBS 127.97]
Length = 191
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 31/41 (75%)
Query: 53 KFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLG 93
KF +A P ++H NG+RHL+WD G+ LT ++V TTG+ ++G
Sbjct: 139 KFTMALPFTFHCFNGVRHLVWDLGKQLTNQQVITTGWTVVG 179
>gi|448512691|ref|XP_003866792.1| succinate dehydrogenase [Candida orthopsilosis Co 90-125]
gi|380351130|emb|CCG21353.1| succinate dehydrogenase [Candida orthopsilosis Co 90-125]
Length = 190
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 57/100 (57%), Gaps = 7/100 (7%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSV----VSFVDALNLSAPILLAG--KF 54
+T +LS HR TGVA+ L T I ++ + V+A S P+ L K
Sbjct: 80 LTWLLSGLHRITGVAMAGAFYALTCTYAATSILNIPFDAATLVNAF-ASLPVYLQYGIKA 138
Query: 55 ILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGA 94
AFP ++H+ NG+RHLIWD G+ LTIK VY TGY +LGA
Sbjct: 139 AAAFPFAFHSFNGVRHLIWDLGKELTIKGVYRTGYIVLGA 178
>gi|221220958|gb|ACM09140.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
precursor [Salmo salar]
Length = 186
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVG-LTTDINSVVSFVDALNLSAPILLAGKFILAFP 59
+ +LS +HR TG T ++ +A + L + +++ + PI+ A KF
Sbjct: 70 LPPLLSGSHRTTGFIFTVMSVSVATMSFLPWNWATILETMRYYVPYPPIVFA-KFGCVAG 128
Query: 60 VSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTL 104
VSYH NGIRHL+WD G + +Y TGY ++ A+L L +T+
Sbjct: 129 VSYHFFNGIRHLVWDLGYGFKMPTLYKTGYLVIALALLNGLRVTV 173
>gi|15604003|ref|NP_220518.1| succinate dehydrogenase cytochrome B560 subunit (sdhC) [Rickettsia
prowazekii str. Madrid E]
gi|383486973|ref|YP_005404653.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
prowazekii str. GvV257]
gi|383487549|ref|YP_005405228.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
prowazekii str. Chernikova]
gi|383488395|ref|YP_005406073.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
prowazekii str. Katsinyian]
gi|383489238|ref|YP_005406915.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
prowazekii str. Dachau]
gi|383499373|ref|YP_005412734.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
prowazekii str. BuV67-CWPP]
gi|383500213|ref|YP_005413573.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
prowazekii str. RpGvF24]
gi|386081955|ref|YP_005998532.1| Succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
prowazekii str. Rp22]
gi|729336|sp|P41085.1|DHSC_RICPR RecName: Full=Succinate dehydrogenase cytochrome b556 subunit;
Short=Cytochrome b-556
gi|409934|gb|AAA18325.1| putative hydrophobic subunit of succinate dehydrogenase [Rickettsia
prowazekii str. Madrid E]
gi|3860694|emb|CAA14595.1| SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT (sdhC) [Rickettsia
prowazekii str. Madrid E]
gi|292571719|gb|ADE29634.1| Succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
prowazekii str. Rp22]
gi|380757338|gb|AFE52575.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
prowazekii str. GvV257]
gi|380757910|gb|AFE53146.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
prowazekii str. RpGvF24]
gi|380760428|gb|AFE48950.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
prowazekii str. Chernikova]
gi|380761274|gb|AFE49795.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
prowazekii str. Katsinyian]
gi|380762119|gb|AFE50639.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
prowazekii str. BuV67-CWPP]
gi|380762961|gb|AFE51480.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
prowazekii str. Dachau]
Length = 124
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 6/103 (5%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFI-LAFP 59
I+S LSI HR TGVAL L + + ++ + L L++ ++ + ++
Sbjct: 25 ISSTLSILHRMTGVALFFVVSILVWWLILSKYDN-----NYLQLASCCIIKICLVAFSYS 79
Query: 60 VSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
YH NGIRHL WD G +IK V TG+ ++ +IL ++L
Sbjct: 80 WCYHLCNGIRHLFWDIGYGFSIKAVNITGWCVVVCSILLTMLL 122
>gi|406989330|gb|EKE09121.1| Succinate dehydrogenase, cytochrome b subunit [uncultured
bacterium]
Length = 136
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 1 ITSVLSITHRGTGVALTA----YALG--LAGVGLTTDINSVVSFVDALNLSAPILLAGKF 54
ITSVLSI HRGTG+ L +AL L G T I + L I+L G
Sbjct: 23 ITSVLSIMHRGTGIVLFGGSLLWALWFVLLAAGSTAYIQGQTLLLSPFGL---IILLG-- 77
Query: 55 ILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAIL 97
+F YH NGIRHL+WD G + V +G+ ++ A+I
Sbjct: 78 -WSFSFFYHFCNGIRHLLWDIGVGFELSTVRKSGWTVIFASIF 119
>gi|119621184|gb|EAX00779.1| UBX domain containing 4, isoform CRA_c [Homo sapiens]
Length = 317
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 41 ALNLSAPILLAGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTG 88
+L L ++ KF L FP+ YHT NGI+HL+WD G+ L I ++Y +G
Sbjct: 254 SLCLGPALMDTTKFALVFPLMYHTWNGIQHLMWDLGKGLKIPQLYQSG 301
>gi|452841759|gb|EME43696.1| hypothetical protein DOTSEDRAFT_72898 [Dothistroma septosporum
NZE10]
Length = 186
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 47 PILLA--GKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTL 104
P++L K +A P ++H+ NGIRHL+WDT +T K+V TG+ ++GA++++ L L
Sbjct: 126 PVVLQVLTKVAVALPFTFHSFNGIRHLVWDTASMITNKQVAQTGWFVVGASVVSALALAF 185
Query: 105 L 105
+
Sbjct: 186 I 186
>gi|156063090|ref|XP_001597467.1| hypothetical protein SS1G_01661 [Sclerotinia sclerotiorum 1980]
gi|154696997|gb|EDN96735.1| hypothetical protein SS1G_01661 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 189
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 9/109 (8%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGV-----GLTTDINSVVSFVDALNLSAPILLAGK 53
I ++S R TG L+ Y G A + G D S+V+ A L+A +L K
Sbjct: 79 IPWIMSGLFRITGCVLSGGFYVFGAAYLVSPLFGWHLDTASMVAAFGAWPLAAKVL--AK 136
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
F +A P +YH+ NG+RH WD G+ V TG+A++G ++ + L L
Sbjct: 137 FSVALPFTYHSFNGLRHFSWDMGKTFKNATVVKTGWAVIGLSVSSALAL 185
>gi|262277891|ref|ZP_06055684.1| succinate dehydrogenase, cytochrome b556 subunit [alpha
proteobacterium HIMB114]
gi|262224994|gb|EEY75453.1| succinate dehydrogenase, cytochrome b556 subunit [alpha
proteobacterium HIMB114]
Length = 122
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 53/109 (48%), Gaps = 15/109 (13%)
Query: 1 ITSVLSITHRGTGV----ALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFIL 56
++S+LSITHR T + + +AL + + L D+ A + GKFI
Sbjct: 18 LSSLLSITHRMTSIFNLMGMMFFALWIFMLFLGEDVYKYFEIFSAT-------VIGKFIF 70
Query: 57 A---FPVSYHTANGIRHLIWDTGRALTIKKVYTTG-YAMLGAAILTNLV 101
+ SYH NGIRHL WD G IK +G + +L + ILT LV
Sbjct: 71 VGIIWSFSYHLLNGIRHLFWDMGYGYEIKTANLSGIFVLLSSFILTFLV 119
>gi|320034179|gb|EFW16124.1| succinate dehydrogenase [Coccidioides posadasii str. Silveira]
Length = 186
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 61/113 (53%), Gaps = 11/113 (9%)
Query: 1 ITSVLSITHRGTGVAL--------TAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAG 52
I+ LS +R TG L TAY + A +G + S+ + AL L+A A
Sbjct: 77 ISWYLSALNRITGSVLSGGLYVFATAYLVAPA-IGWHLESASLAAAFGALPLAA--KFAI 133
Query: 53 KFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
K +A P ++H NG+RHLIWD G+ L+ K+V TG+ ++G ++ + L L+
Sbjct: 134 KLGVAMPFTFHCMNGVRHLIWDLGKKLSNKEVIATGWTVVGLSMASAFALALI 186
>gi|119183341|ref|XP_001242721.1| hypothetical protein CIMG_06617 [Coccidioides immitis RS]
Length = 305
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Query: 50 LAGKFIL----AFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
LA KF + A P ++H NG+RHLIWD G+ L+ K+V TG+ ++G ++ + L L+
Sbjct: 246 LAAKFAIKLGVAMPFTFHCMNGVRHLIWDLGKKLSNKEVIATGWTVVGLSMASAFALALI 305
>gi|392865630|gb|EAS31432.2| succinate dehydrogenase, cytochrome b556 subunit [Coccidioides
immitis RS]
Length = 186
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 61/113 (53%), Gaps = 11/113 (9%)
Query: 1 ITSVLSITHRGTGVAL--------TAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAG 52
I+ LS +R TG L TAY + A +G + S+ + AL L+A A
Sbjct: 77 ISWYLSALNRITGSVLSGGLYVFATAYLVAPA-IGWHLESASLAAAFGALPLAA--KFAI 133
Query: 53 KFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
K +A P ++H NG+RHLIWD G+ L+ K+V TG+ ++G ++ + L L+
Sbjct: 134 KLGVAMPFTFHCMNGVRHLIWDLGKKLSNKEVIATGWTVVGLSMASAFALALI 186
>gi|170585370|ref|XP_001897457.1| Succinate dehydrogenase cytochrome b560 subunit,
mitochondrialprecursor [Brugia malayi]
gi|158595136|gb|EDP33709.1| Succinate dehydrogenase cytochrome b560 subunit,
mitochondrialprecursor, putative [Brugia malayi]
Length = 188
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVG---LTTDINSVVSFVDALNLSAPILLAGKFILA 57
+T ++S HR TG A+ A L + GVG L + + + F+ L L I KFI+A
Sbjct: 66 VTWMVSGFHRMTGCAM-AGTLLIGGVGFALLPLNFTTFIDFIRGLGLPWVITDIFKFIIA 124
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGY 89
+P+++H+ NGIR + +D I VYT+GY
Sbjct: 125 YPIAFHSLNGIRFIAFDLALGTDIASVYTSGY 156
>gi|303319777|ref|XP_003069888.1| Succinate dehydrogenase cytochrome b subunit family protein
[Coccidioides posadasii C735 delta SOWgp]
gi|240109574|gb|EER27743.1| Succinate dehydrogenase cytochrome b subunit family protein
[Coccidioides posadasii C735 delta SOWgp]
Length = 193
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 61/113 (53%), Gaps = 11/113 (9%)
Query: 1 ITSVLSITHRGTGVAL--------TAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAG 52
I+ LS +R TG L TAY + A +G + S+ + AL L+A A
Sbjct: 84 ISWYLSALNRITGSVLSGGLYVFATAYLVAPA-IGWHLESASLAAAFGALPLAAK--FAI 140
Query: 53 KFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
K +A P ++H NG+RHLIWD G+ L+ K+V TG+ ++G ++ + L L+
Sbjct: 141 KLGVAMPFTFHCMNGVRHLIWDLGKKLSNKEVIATGWTVVGLSMASAFALALI 193
>gi|154293035|ref|XP_001547075.1| succinate dehydrogenase cytochrome b subunit [Botryotinia
fuckeliana B05.10]
gi|254839123|gb|ACT83440.1| SdhC [Botryotinia fuckeliana]
gi|254839125|gb|ACT83441.1| SdhC [Botryotinia fuckeliana]
Length = 189
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 56/109 (51%), Gaps = 9/109 (8%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGV-----GLTTDINSVVSFVDALNLSAPILLAGK 53
I ++S +R TG L+ Y G A + G D S+V+ A L+A L K
Sbjct: 79 IPWIMSGLNRITGCILSGGFYVFGAAYLASPLFGWHLDTASMVAAFGAWPLAAKFL--AK 136
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
F LA P +YH+ NG+RHL WD G+ V TG+ ++G ++ + L L
Sbjct: 137 FTLAMPFTYHSFNGLRHLAWDMGKTFKNATVVKTGWTVVGLSVGSALAL 185
>gi|339244711|ref|XP_003378281.1| putative succinate dehydrogenase, cytochrome b556 subunit
[Trichinella spiralis]
gi|316972827|gb|EFV56474.1| putative succinate dehydrogenase, cytochrome b556 subunit
[Trichinella spiralis]
Length = 185
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 61/108 (56%), Gaps = 6/108 (5%)
Query: 1 ITSVLSITHRGTGVAL----TAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFIL 56
+T ++S HR +GV + +++GL D +++ ++ L+L + A K+ +
Sbjct: 76 LTWMVSGLHRISGVVMGTTVALFSIGLMAAPF--DFTTLIEYIRNLHLPVVFVYAVKYAI 133
Query: 57 AFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTL 104
A+P+++HT NG+R L +D + I VY TG+ ++G +++ +LT
Sbjct: 134 AWPLTFHTLNGVRFLAFDLAKGTDIPTVYKTGWTVVGLSLVIAAILTF 181
>gi|402589567|gb|EJW83499.1| cytochrome b-large subunit [Wuchereria bancrofti]
Length = 188
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVG---LTTDINSVVSFVDALNLSAPILLAGKFILA 57
+T ++S HR TG A+ A L + GVG L + + + F+ L L I KFI+A
Sbjct: 66 VTWMVSGFHRMTGCAM-AGTLLIGGVGFALLPLNFTTFIDFIRGLGLPWIITDIFKFIIA 124
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGY 89
+P+++H+ NGIR + +D I VYT+GY
Sbjct: 125 YPIAFHSLNGIRFIAFDLALGTDIASVYTSGY 156
>gi|17554318|ref|NP_499283.1| Protein MEV-1 [Caenorhabditis elegans]
gi|1169194|sp|P41956.1|C560_CAEEL RecName: Full=Succinate dehydrogenase cytochrome b560 subunit,
mitochondrial; Flags: Precursor
gi|433177|gb|AAA20081.1| CYT-1 [Caenorhabditis elegans]
gi|3879510|emb|CAA82572.1| Protein MEV-1 [Caenorhabditis elegans]
Length = 182
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 59/102 (57%), Gaps = 6/102 (5%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVG---LTTDINSVVSFVDALNLSAPILLAGKFILA 57
+T +LS HR +G + A L + G+G L D + V F+ + NL + K+I+A
Sbjct: 65 LTWMLSGFHRISGCVM-AGTLLVGGIGFAVLPFDFTAFVDFIRSWNLPCAVTAVFKYIIA 123
Query: 58 FPVSYHTANGIRHLIWDTGRAL-TIKKVYTTGYAMLG-AAIL 97
FP+ +HT NGIR L +D + + + ++Y +GY + G +AIL
Sbjct: 124 FPIIFHTLNGIRFLGFDLAKGVNNVGQIYKSGYLVSGLSAIL 165
>gi|312071011|ref|XP_003138411.1| hypothetical protein LOAG_02826 [Loa loa]
gi|307766426|gb|EFO25660.1| hypothetical protein LOAG_02826 [Loa loa]
Length = 187
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVG---LTTDINSVVSFVDALNLSAPILLAGKFILA 57
+T ++S HR TG A+ A AL + GVG L + + + F+ L L + KF++A
Sbjct: 66 VTWMVSGFHRVTGCAM-AGALLIGGVGFALLPLNFTTFIDFIRGLGLPWVVTDMFKFVIA 124
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNL 100
+P+ +H+ NGIR + +D I VY +GY +L A L L
Sbjct: 125 YPIVFHSLNGIRFIAFDLALGTDIASVYASGYLVLSLAALIAL 167
>gi|119621185|gb|EAX00780.1| UBX domain containing 4, isoform CRA_d [Homo sapiens]
Length = 56
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 27/36 (75%)
Query: 53 KFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTG 88
KF L FP+ YHT NGI+HL+WD G+ L I ++Y +G
Sbjct: 5 KFALVFPLMYHTWNGIQHLMWDLGKGLKIPQLYQSG 40
>gi|385153437|ref|YP_006073043.1| sdh3 gene product (mitochondrion) [Nitella hyalina]
gi|335354168|gb|AEH42855.1| succinate:cytochrome c oxidoreductase subunit 3 (mitochondrion)
[Nitella hyalina]
Length = 131
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 45/100 (45%), Gaps = 5/100 (5%)
Query: 1 ITSVLSITHRGTGVALTAYALG----LAGVGLTTDINSVVSFVDALNLSAPILLAGKFIL 56
TS SI HR G L L L+ FV L+ F L
Sbjct: 18 FTSTFSIFHRICGAFLATTVLFSILFFKICELSLTFYHFYLFVFYFICYFHWLIFSFFNL 77
Query: 57 AF-PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAA 95
AF + YH +NGIRHL+WD G +L + KVYT+G ML A
Sbjct: 78 AFLALCYHMSNGIRHLLWDLGHSLDLSKVYTSGTIMLFFA 117
>gi|374623567|ref|ZP_09696074.1| succinate dehydrogenase subunit C [Ectothiorhodospira sp. PHS-1]
gi|373942675|gb|EHQ53220.1| succinate dehydrogenase subunit C [Ectothiorhodospira sp. PHS-1]
Length = 125
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 54/95 (56%), Gaps = 12/95 (12%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF-- 58
+TSVLSI HR TGV L+ +A + L + ++ + +A A LL G +A
Sbjct: 19 MTSVLSILHRITGVILS-----VASLILVYWLAALAAGPEAFA-RAEALLHGWIGIAILI 72
Query: 59 PVS----YHTANGIRHLIWDTGRALTIKKVYTTGY 89
PV+ YH GIRHL+WD G ALTIK VY TG+
Sbjct: 73 PVTLALFYHLCAGIRHLVWDAGVALTIKGVYVTGW 107
>gi|157825304|ref|YP_001493024.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia akari
str. Hartford]
gi|157799262|gb|ABV74516.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia akari
str. Hartford]
Length = 124
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 6/103 (5%)
Query: 1 ITSVLSITHRGTGVALT-AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFP 59
I+S LSI HR TGVAL A ++ + + L+ N+ + F + I L +++
Sbjct: 25 ISSTLSILHRITGVALFFAVSILVWWLILSKYDNNYLQFAKCCIIK--ICLVA---VSYS 79
Query: 60 VSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
YH NGIRHL WD G +IK V TG+ ++ ++L ++L
Sbjct: 80 WFYHLCNGIRHLFWDIGYGFSIKAVNITGWCVVVGSLLLTMLL 122
>gi|308497614|ref|XP_003110994.1| CRE-MEV-1 protein [Caenorhabditis remanei]
gi|308242874|gb|EFO86826.1| CRE-MEV-1 protein [Caenorhabditis remanei]
Length = 184
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 59/108 (54%), Gaps = 5/108 (4%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVG---LTTDINSVVSFVDALNLSAPILLAGKFILA 57
+T +LS HR +G + A L + G+G L D + V ++ NL + K+I+A
Sbjct: 65 LTWMLSGFHRISGCVM-AGTLLVGGIGFAVLPFDFTTFVEYIRGWNLPCAVTAVFKYIIA 123
Query: 58 FPVSYHTANGIRHLIWDTGRAL-TIKKVYTTGYAMLGAAILTNLVLTL 104
FP+ +HT NGIR L +D + + I +VY +G+ + G + + L + +
Sbjct: 124 FPIIFHTLNGIRFLGFDLAKGVDNIGQVYKSGWLVFGVSAVIALAIVI 171
>gi|239947122|ref|ZP_04698875.1| succinate dehydrogenase, cytochrome b556 subunit [Rickettsia
endosymbiont of Ixodes scapularis]
gi|239921398|gb|EER21422.1| succinate dehydrogenase, cytochrome b556 subunit [Rickettsia
endosymbiont of Ixodes scapularis]
Length = 124
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 1 ITSVLSITHRGTGVALT-AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFP 59
I+S LSI HR TGVAL A ++ + L+ N+ + + + ++ A ++
Sbjct: 25 ISSTLSILHRMTGVALFFAVSILAWWLILSKYDNNYLQLANCCIIKICLVAA-----SYA 79
Query: 60 VSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
YH NGIRHL WD G +IK V TG+ ++ +IL ++L
Sbjct: 80 WFYHLCNGIRHLFWDIGYGFSIKAVNITGWCVVVCSILLTMLL 122
>gi|268572383|ref|XP_002641307.1| C. briggsae CBR-MEV-1 protein [Caenorhabditis briggsae]
gi|1169193|sp|P41955.1|C560_CAEBR RecName: Full=Succinate dehydrogenase cytochrome b560 subunit,
mitochondrial; Flags: Precursor
gi|450581|gb|AAA20078.1| CDS structure deduced from alignment with C. elegans cyt-1 gene
[Caenorhabditis briggsae]
Length = 184
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
Query: 1 ITSVLSITHRGTGVALTAYAL--GLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+T +LS HR +G + L GL L D + V ++ NL + K+I+AF
Sbjct: 65 LTWMLSGFHRISGCVMAGTLLVGGLGFAVLPLDFTTFVEYIRGWNLPCAVTAVFKYIIAF 124
Query: 59 PVSYHTANGIRHLIWDTGRAL-TIKKVYTTGYAMLGAAILTNLVLTL 104
P+ +HT NGIR L +D + + I +VY +G+ + G + + L + +
Sbjct: 125 PIIFHTLNGIRFLGFDLAKGVDNIGQVYKSGWLVFGVSAVIALAIVI 171
>gi|262186706|ref|YP_003275965.1| succinate dehydrogenase subunit 3 (mitochondrion) [Pleurozia
purpurea]
gi|237780703|gb|ACR19349.1| succinate dehydrogenase subunit 3 [Pleurozia purpurea]
Length = 137
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 1 ITSVLSITHRGTG------VALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKF 54
+TS SI HR +G V + ++ + + LT F+ L+ I+ F
Sbjct: 18 LTSTFSIFHRISGAFLATMVLFSIFSFKIGDLSLTFYHFYQYFFLLTFYLNWVIISLVNF 77
Query: 55 ILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAA 95
L + YH +NG+RHL+WD+G L + KVYT+G ML A
Sbjct: 78 TLL-ALCYHMSNGVRHLLWDSGLFLELSKVYTSGIIMLFCA 117
>gi|47194488|emb|CAF91055.1| unnamed protein product [Tetraodon nigroviridis]
Length = 129
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 4 VLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVS 61
++SITHRGTGV L+ A +A + L + + +L++ ++ K +AFPVS
Sbjct: 60 MMSITHRGTGVGLSGAISAFAVAALLLPGSYPDYLDMISSLSIGPVLIGMAKLGIAFPVS 119
Query: 62 YHTANGIRHL 71
YHT NGIRHL
Sbjct: 120 YHTYNGIRHL 129
>gi|343425083|emb|CBQ68620.1| related to SDH3-cytochrome b560 subunit of respiratory complex II
[Sporisorium reilianum SRZ2]
Length = 199
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 54/100 (54%), Gaps = 7/100 (7%)
Query: 1 ITSVLSITHRGTGVALT----AYALGLAGVGL--TTDINSVVSFVDAL-NLSAPILLAGK 53
IT LSI +R TG L+ AY AG L + + S S D + L A A K
Sbjct: 88 ITWYLSIINRITGTGLSVLMYAYFSAYAGYPLFGSAEALSSGSLTDFVATLPAWFKTAVK 147
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLG 93
LA ++H+ NG+RHL WD G ALT+K VY++ Y ++G
Sbjct: 148 VPLALAFTFHSFNGLRHLAWDWGYALTLKGVYSSAYLVMG 187
>gi|51473326|ref|YP_067083.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia typhi
str. Wilmington]
gi|383752102|ref|YP_005427202.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia typhi
str. TH1527]
gi|383842938|ref|YP_005423441.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia typhi
str. B9991CWPP]
gi|81390260|sp|Q68XP1.1|DHSC_RICTY RecName: Full=Succinate dehydrogenase cytochrome b556 subunit;
Short=Cytochrome b-556
gi|51459638|gb|AAU03601.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia typhi
str. Wilmington]
gi|380758745|gb|AFE53980.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia typhi
str. TH1527]
gi|380759585|gb|AFE54819.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia typhi
str. B9991CWPP]
Length = 124
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFI-LAFP 59
I+S LSI HR TGVAL L + + ++ + L L+ ++ + ++
Sbjct: 25 ISSTLSILHRMTGVALFFVVSILVWWLILSKYDN-----NYLQLARCCIIKICLVAFSYA 79
Query: 60 VSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
YH NGIRHL WD G +I+ V TG+ ++ +IL ++L
Sbjct: 80 WCYHLCNGIRHLFWDIGYGFSIRAVNITGWCVVVCSILLTMLL 122
>gi|327351834|gb|EGE80691.1| succinate dehydrogenase cytochrome b560 subunit [Ajellomyces
dermatitidis ATCC 18188]
Length = 293
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 60/111 (54%), Gaps = 11/111 (9%)
Query: 1 ITSVLSITHRGTGVALTA-----YALGLAG--VGLTTDINSVVSFVDALNLSAPILLAGK 53
ITSVLSI HR TG+ ++ +A+ LA +G D S+ + AL ++A +LL +
Sbjct: 138 ITSVLSILHRNTGLLVSGGFYLFFAVYLASPWLGWHIDSASMAASFGALPVAAKVLL--R 195
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTL 104
+A P ++H+ NG+RHLIW L T G +L AIL N T+
Sbjct: 196 TTVALPFTFHSFNGVRHLIWVAMNNL--DSTPTIGPEILPCAILENQFSTM 244
>gi|341878862|gb|EGT34797.1| CBN-MEV-1 protein [Caenorhabditis brenneri]
Length = 183
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 59/108 (54%), Gaps = 5/108 (4%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVG---LTTDINSVVSFVDALNLSAPILLAGKFILA 57
+T +LS HR +G + A L + G+G L D + + ++ NL + K+I+A
Sbjct: 65 LTWMLSGFHRISGCVM-AGTLLVGGIGFAVLPLDFTTFIEYIRGWNLPCAVTAVFKYIIA 123
Query: 58 FPVSYHTANGIRHLIWDTGRAL-TIKKVYTTGYAMLGAAILTNLVLTL 104
FP+ +HT NGIR L +D + + I +VY +G+ + G + + L + +
Sbjct: 124 FPIIFHTLNGIRFLGFDLAKGVDNIGQVYKSGWLVFGVSAVIALAIVI 171
>gi|295666820|ref|XP_002793960.1| succinate dehydrogenase cytochrome B subunit [Paracoccidioides sp.
'lutzii' Pb01]
gi|226277613|gb|EEH33179.1| succinate dehydrogenase cytochrome B subunit [Paracoccidioides sp.
'lutzii' Pb01]
Length = 188
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 9/100 (9%)
Query: 1 ITSVLSITHRGTGVAL-------TAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGK 53
+T VLS +R TG+AL +++ L +G + + + AL L+A + L K
Sbjct: 78 VTWVLSSLNRITGLALAGSLYIFSSFYLVSPLLGWHLESPVIAAAFGALPLAAKVGL--K 135
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLG 93
F A P +H NG RHLIWD G+ + K+V TG+ ++G
Sbjct: 136 FTAALPFMFHALNGCRHLIWDLGKQFSNKQVIATGWMVVG 175
>gi|38638302|ref|NP_943707.1| succinate:cytochrome c oxidoreductase subunit 3 [Chara vulgaris]
gi|32966616|gb|AAP92199.1| succinate:cytochrome c oxidoreductase subunit 3 [Chara vulgaris]
Length = 131
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 45/100 (45%), Gaps = 5/100 (5%)
Query: 1 ITSVLSITHRGTGVALTAYALG----LAGVGLTTDINSVVSFVDALNLSAPILLAGKFIL 56
+TS SI HR G L L L+ FV L+ F L
Sbjct: 18 LTSTFSIFHRICGAFLATTVLFSILFFKICELSLTFYHFYLFVFYFICYFHWLIFSLFNL 77
Query: 57 AF-PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAA 95
AF + YH +NGIRHL+WD G +L + KVYT+G M A
Sbjct: 78 AFLALCYHMSNGIRHLLWDLGHSLDLSKVYTSGTIMFFFA 117
>gi|389879130|ref|YP_006372695.1| succinate dehydrogenase cytochrome b-556 subunit [Tistrella mobilis
KA081020-065]
gi|388529914|gb|AFK55111.1| succinate dehydrogenase cytochrome b-556 subunit [Tistrella mobilis
KA081020-065]
Length = 128
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAG--VGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+T+++SI+HR TGVAL+ L LA + T S + L +LL + LA
Sbjct: 20 LTALMSISHRATGVALSVGTLLLAWWLIAAATGAESFETVQGFLGSWFGMLLMFGWTLA- 78
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAA 95
+ YH ANGIRHL+WD G +K+ G +L AA
Sbjct: 79 -LFYHMANGIRHLVWDAGYGFDVKQAEKVGRIVLVAA 114
>gi|189209924|ref|XP_001941294.1| succinate dehydrogenase cytochrome b560 subunit [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187977387|gb|EDU44013.1| succinate dehydrogenase cytochrome b560 subunit [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 177
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 9/111 (8%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGV-----GLTTDINSVVSFVDALNLSAPILLAGK 53
ITS+ S +R TGV L+ Y G+A + G + S+V+ V A A + K
Sbjct: 67 ITSIASAFNRITGVVLSGSLYLFGIAYLVAPYTGWHLETQSMVATVAAW--PAAVKAGIK 124
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTL 104
AFP +H+ NG+RHL WD G ++V TG++++G ++ +L T
Sbjct: 125 AFYAFPFFFHSLNGLRHLAWDVGVGFKNQQVIRTGWSVVGLTVVMSLYYTF 175
>gi|452982384|gb|EME82143.1| hypothetical protein MYCFIDRAFT_72469 [Pseudocercospora fijiensis
CIRAD86]
Length = 184
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 53 KFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
KF LA P ++H NG+RHL+WDT ++ +KV TG+ ++G + +L L +
Sbjct: 132 KFTLAMPFTFHCFNGLRHLVWDTASMISNQKVSQTGWFVVGLTTVASLALAFI 184
>gi|219112939|ref|XP_002186053.1| succinate dehydrogenase cytochrome b subunit [Phaeodactylum
tricornutum CCAP 1055/1]
gi|209582903|gb|ACI65523.1| succinate dehydrogenase cytochrome b subunit [Phaeodactylum
tricornutum CCAP 1055/1]
Length = 167
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAG-KFILAFP 59
I +V SIT+R TG L+ ALGL L S + + + ++ AG KF ++FP
Sbjct: 61 IAAVASITNRVTGCVLSFGALGLGAAELLGGSGSALYIMQFVGSQGMLISAGSKFAISFP 120
Query: 60 VSYHTANGIRHLIWDT-GRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
+ YH G+RHL+WD LT V + Y + + L + L +
Sbjct: 121 IVYHYGGGLRHLMWDQYPEMLTNTDVAKSSYQLFAGSALISGALMFM 167
>gi|226287137|gb|EEH42650.1| succinate dehydrogenase cytochrome b560 subunit [Paracoccidioides
brasiliensis Pb18]
Length = 188
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 1 ITSVLSITHRGTGVAL-------TAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGK 53
+T VLS +R TGVAL +++ L +G + + + + AL L+A + L K
Sbjct: 78 VTWVLSSLNRITGVALAGSLYIFSSFYLVSPLLGWHLESHMIAAAFGALPLAAKVGL--K 135
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
F A P +H NG RHLIWD G+ + K+V G+ ++G + + L L
Sbjct: 136 FTAAVPFMFHALNGCRHLIWDLGKQFSNKQVIAGGWTVVGLTLSSALALACF 187
>gi|6649873|gb|AAF21608.1|AF018287_2 SdhC [papaya bunchy top disease rickettsia]
Length = 125
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPV 60
I+S LSI HR TGVAL LA + + +S +++ N I+ + +F
Sbjct: 25 ISSTLSILHRMTGVALFFAVSILAWWFIFSKFDS--NYIQLANCCC-IIKICLILTSFAW 81
Query: 61 SYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
YH NGIRHL WD G IK V TG++++ ++L ++L
Sbjct: 82 FYHLCNGIRHLFWDIGYGFPIKAVNLTGWSVVICSVLFTILL 123
>gi|261187750|ref|XP_002620293.1| succinate dehydrogenase cytochrome b560 subunit [Ajellomyces
dermatitidis SLH14081]
gi|239593506|gb|EEQ76087.1| succinate dehydrogenase cytochrome b560 subunit [Ajellomyces
dermatitidis SLH14081]
Length = 188
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 60/111 (54%), Gaps = 11/111 (9%)
Query: 1 ITSVLSITHRGTGVALTA-----YALGLAG--VGLTTDINSVVSFVDALNLSAPILLAGK 53
+TSVLSI HR TG+ ++ +A+ LA +G D S+ + AL ++A +LL +
Sbjct: 66 VTSVLSILHRNTGLLVSGGFYLFFAVYLASPWLGWHIDSASMAASFGALPVAAKVLL--R 123
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTL 104
+A P ++H+ NG+RHLIW L T G +L AIL N T+
Sbjct: 124 TTVALPFTFHSFNGVRHLIWVAMNNL--DSTPTIGPEILPCAILENQFSTM 172
>gi|91205983|ref|YP_538338.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia bellii
RML369-C]
gi|157826653|ref|YP_001495717.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia bellii
OSU 85-389]
gi|122425294|sp|Q1RHB5.1|DHSC_RICBR RecName: Full=Succinate dehydrogenase cytochrome b556 subunit;
Short=Cytochrome b-556
gi|91069527|gb|ABE05249.1| Succinate dehydrogenase cytochrome b-556 subunit [Rickettsia bellii
RML369-C]
gi|157801957|gb|ABV78680.1| Succinate dehydrogenase cytochrome b-556 subunit [Rickettsia bellii
OSU 85-389]
Length = 125
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPV 60
I+S LSI HR TGVAL LA + + +S +++ N I + + +F
Sbjct: 25 ISSTLSILHRMTGVALFFAVSILAWWFILSKFDS--NYIKLANCCCIIKICLI-LTSFAW 81
Query: 61 SYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
YH NGIRHL WD G +IK V TG++++ ++L ++L
Sbjct: 82 FYHLCNGIRHLFWDIGLGFSIKAVNLTGWSVVICSVLFTILL 123
>gi|383481108|ref|YP_005390023.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
rhipicephali str. 3-7-female6-CWPP]
gi|378933447|gb|AFC71950.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
rhipicephali str. 3-7-female6-CWPP]
Length = 124
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 6/103 (5%)
Query: 1 ITSVLSITHRGTGVALT-AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFP 59
I+S LSI HR TGVAL A ++ + + L+ N+ + + + I L +++
Sbjct: 25 ISSTLSILHRMTGVALFFAVSIFVWWLILSKYDNNYLQLAECCIIK--ICLVA---VSYA 79
Query: 60 VSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
YH NGIRHL WD G +IK V TG+ ++ ++L ++L
Sbjct: 80 WFYHLCNGIRHLFWDIGYGFSIKLVNITGWCVVVGSVLLTVLL 122
>gi|383502160|ref|YP_005415519.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
australis str. Cutlack]
gi|378933171|gb|AFC71676.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
australis str. Cutlack]
Length = 124
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFI-LAFP 59
I+S LSI HR TGVAL LA + + ++ + L L+ ++ + +++
Sbjct: 25 ISSTLSILHRMTGVALFFAVSILAWWLILSKYDN-----NYLQLAKCCIIKICLVAVSYV 79
Query: 60 VSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
YH NGIRHL WD G +IK V TG+ ++ ++L ++L
Sbjct: 80 WFYHLCNGIRHLFWDIGYGFSIKAVNITGWCVVVGSVLLTMLL 122
>gi|258563078|ref|XP_002582284.1| predicted protein [Uncinocarpus reesii 1704]
gi|237907791|gb|EEP82192.1| predicted protein [Uncinocarpus reesii 1704]
Length = 221
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGV-----GLTTDINSVVSFVDALNLSAPILLAGK 53
I++VLS R TG+A + Y G+A V G S+ + AL L+A + A K
Sbjct: 111 ISAVLSSLERLTGMAFSGGLYLFGIAYVLSPYLGWGLSAASMATAFGALPLAAKV--AAK 168
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
F +A+P +H NG++ ++W +G+ LT + V TG +GAA + + L
Sbjct: 169 FTIAWPFVFHCLNGVKCVVWSSGKFLTNQGVKKTGMLTVGAATIGAIALAFF 220
>gi|46201871|ref|ZP_00054198.2| COG2009: Succinate dehydrogenase/fumarate reductase, cytochrome b
subunit [Magnetospirillum magnetotacticum MS-1]
Length = 109
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFIL---A 57
T++LSI+HR TGVAL + LA L + V++ A + +L GK +L
Sbjct: 3 FTAILSISHRITGVALAVGTIVLA-YWLASAAYGPVAYGHAQAVLGSVL--GKLVLFGWT 59
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAIL 97
+ YH NGIRHL WD GR I + +G ++GAA L
Sbjct: 60 AALFYHLCNGIRHLFWDKGRGYEIAEADKSGRMVVGAAAL 99
>gi|325182722|emb|CCA17177.1| transmembrane protein putative [Albugo laibachii Nc14]
Length = 170
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 51/102 (50%), Gaps = 18/102 (17%)
Query: 1 ITSVLSITHRGTGVALT-------AYALGLAGVGLTTDINSVVSFVDALNLSAPILLA-G 52
IT+V SIT+R TGV L+ +YAL VG V S + + +S P
Sbjct: 56 ITAVSSITNRVTGVGLSVGFVAASSYAL----VG-----GDVPSLIHSAQVSIPAFTPLS 106
Query: 53 KFILAFPVSYHTANGIRHLIWDTGRAL-TIKKVYTTGYAMLG 93
K +AFP+SYHT IRH+ WD L K T+ YA+ G
Sbjct: 107 KLFVAFPLSYHTLAAIRHMAWDKRPELINNKDSPTSSYALFG 148
>gi|225683516|gb|EEH21800.1| succinate dehydrogenase [Paracoccidioides brasiliensis Pb03]
Length = 188
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 1 ITSVLSITHRGTGVAL-------TAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGK 53
+T VLS +R TGVAL +++ L +G + + + + AL L+A + L K
Sbjct: 78 VTWVLSSLNRITGVALAGSLYIFSSFYLVSPLLGWHLESHVIAAAFGALPLAAKVGL--K 135
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
F A P +H NG RHLIWD G+ + K+V G+ ++G + + L L
Sbjct: 136 FTAAVPFMFHALNGCRHLIWDLGKQFSNKQVIAGGWTVVGLTLSSALALACF 187
>gi|365759738|gb|EHN01512.1| Sdh3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401838958|gb|EJT42355.1| SDH3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 198
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 50 LAGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLG-AAILTNLVLTL 104
+ G F F + H IRHLIWDT + LT+K VY TGYA+LG A+L +LTL
Sbjct: 145 IKGSFAYLFAI--HYGGAIRHLIWDTAKELTLKGVYRTGYALLGFTAVLGTYLLTL 198
>gi|384252986|gb|EIE26461.1| succinate dehydrogenase subunit b560 [Coccomyxa subellipsoidea
C-169]
Length = 207
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAP-ILLAGKFILAFP 59
I ++ SI +R TGVALT G + LT D+ + + +A+ ++P IL K +AFP
Sbjct: 94 INAITSIMNRATGVALTVGFTGAGWIALTGDLPATI---EAIKSTSPLILYPFKAAVAFP 150
Query: 60 VSYHTANGIRHLIWDTGR 77
+ YH G+RH+ WD +
Sbjct: 151 LVYHYLGGVRHVFWDKAK 168
>gi|406697398|gb|EKD00659.1| hypothetical protein A1Q2_05054 [Trichosporon asahii var. asahii
CBS 8904]
Length = 152
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 8/83 (9%)
Query: 1 ITSVLSITHRGTGVALT------AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKF 54
+T LS HR TGVAL A A L + D +++ V +L + + GK
Sbjct: 70 LTWYLSGLHRITGVALGGLFYVGALAYCLHPLYPAIDSTHLINLVH--DLPTWVKVTGKT 127
Query: 55 ILAFPVSYHTANGIRHLIWDTGR 77
++AFP+S+H+ NG+RHL+WDTG+
Sbjct: 128 LIAFPLSFHSFNGLRHLMWDTGK 150
>gi|386814555|ref|ZP_10101773.1| succinate dehydrogenase, cytochrome b556 subunit [Thiothrix nivea
DSM 5205]
gi|386419131|gb|EIJ32966.1| succinate dehydrogenase, cytochrome b556 subunit [Thiothrix nivea
DSM 5205]
Length = 125
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 60/110 (54%), Gaps = 10/110 (9%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPIL--LAGKFIL-- 56
+ ++LS+ HRGTG+ L + + + + ++ ++ N + IL GK +L
Sbjct: 20 LPAILSVLHRGTGIVLA-----IGTILVAWWLAAIAGGEESFNTANAILGSWFGKLVLFG 74
Query: 57 -AFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
++ + YH NGIRHL+WDTG L + VY G ++ A+ + ++L ++
Sbjct: 75 WSWTLFYHLCNGIRHLVWDTGFGLDLPTVYLGGKVVIAASFVLTILLWIV 124
>gi|383482976|ref|YP_005391890.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
montanensis str. OSU 85-930]
gi|378935330|gb|AFC73831.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
montanensis str. OSU 85-930]
Length = 124
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFI-LAFP 59
I+S LSI HR TGVAL LA + + ++ + L L+ ++ + +++
Sbjct: 25 ISSTLSILHRMTGVALFFAVSILAWWLILSKYDN-----NYLQLAECCIIKICLVAISYA 79
Query: 60 VSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
YH NGIRHL WD G +IK V TG+ ++ ++L ++L
Sbjct: 80 WFYHLCNGIRHLFWDIGYGFSIKLVNITGWCVVVGSVLLTVLL 122
>gi|91208853|ref|YP_539014.1| succinate dehydrogenase subunit 3 [Physcomitrella patens]
gi|90991393|dbj|BAE93085.1| succinate dehydrogenase subunit 3 (mitochondrion) [Physcomitrella
patens]
Length = 131
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 51/113 (45%), Gaps = 31/113 (27%)
Query: 1 ITSVLSITHRGTG------------------VALTAYALGLAGVGLTTDINSVVSFVDAL 42
+TS SI HR +G + LT+Y L T + ++S +
Sbjct: 18 LTSTFSIFHRISGAFLASMVFFSILFLKIGDLNLTSYYLYRYAFSFTFYFHWLIS--SVV 75
Query: 43 NLSAPILLAGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAA 95
N S LLA + YH +NGIRHL+WD G L + KVYT+G ML A
Sbjct: 76 NFS---LLA--------LCYHMSNGIRHLLWDLGFFLELSKVYTSGIIMLFCA 117
>gi|378786349|dbj|BAL63270.1| succinate:cytochrome c oxidoreductase subunit 3 (mitochondrion)
[Pyropia vietnamensis]
Length = 129
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 2 TSVLSITHRGTGVAL----TAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILA 57
+S+ SI HR +GV + ++ L + I+ +F++ +S +L + K +++
Sbjct: 20 SSIFSIWHRISGVFMFTLINSFFFLLNQAYFSYTISFFQNFLEDYTISNLLLFSMKLLVS 79
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTL 104
YH NGIRH +WD+ ++ KKVY L I N++L
Sbjct: 80 VIFLYHITNGIRHFLWDSVIHVSTKKVYQDS-NFLLFFIFINVILQF 125
>gi|379713240|ref|YP_005301578.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
massiliae str. AZT80]
gi|376333886|gb|AFB31118.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
massiliae str. AZT80]
Length = 124
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 6/103 (5%)
Query: 1 ITSVLSITHRGTGVALT-AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFP 59
I+S LSI HR TGVAL A ++ + + L+ N+ + + + I L +++
Sbjct: 25 ISSTLSILHRMTGVALFFAVSILVWWLILSKYDNNYLQLAECCIIK--ICLVA---VSYA 79
Query: 60 VSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
YH NGIRHL WD G +IK V TG+ ++ ++L ++L
Sbjct: 80 WFYHLCNGIRHLFWDIGYGFSIKLVNITGWCVVVGSVLLTVLL 122
>gi|407783534|ref|ZP_11130733.1| succinate dehydrogenase cytochrome b-556 subunit [Oceanibaculum
indicum P24]
gi|407201540|gb|EKE71539.1| succinate dehydrogenase cytochrome b-556 subunit [Oceanibaculum
indicum P24]
Length = 118
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 10/102 (9%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFIL---- 56
ITS LSI HR TGVAL+ + + LT + + + D L+ + + L
Sbjct: 8 ITSALSILHRITGVALS-----VGTLMLTWWLLAAAAGPDHFALAHGFITSWLGWLLLLG 62
Query: 57 -AFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAIL 97
+ + YH +NGIRHL WD G + +VY +GYA+L A ++
Sbjct: 63 WSVALFYHLSNGIRHLAWDAGWGFELPQVYKSGYAVLAATVI 104
>gi|383312136|ref|YP_005364937.1| succinate dehydrogenase cytochrome b-556 subunit [Candidatus
Rickettsia amblyommii str. GAT-30V]
gi|378930796|gb|AFC69305.1| succinate dehydrogenase cytochrome b-556 subunit [Candidatus
Rickettsia amblyommii str. GAT-30V]
Length = 124
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFI-LAFP 59
I+S LSI HR TGVAL LA + + ++ + L L+ ++ + +++
Sbjct: 25 ISSTLSILHRMTGVALFFAVSILAWWLILSKYDN-----NYLQLAECCIIKICLVAVSYA 79
Query: 60 VSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
YH NGIRHL WD G +IK V TG+ ++ ++L ++L
Sbjct: 80 WFYHLCNGIRHLFWDIGYGFSIKLVNITGWCVVVGSVLLTVLL 122
>gi|209967178|ref|YP_002300093.1| succinate dehydrogenase, cytochrome b556 [Rhodospirillum centenum
SW]
gi|209960644|gb|ACJ01281.1| succinate dehydrogenase, cytochrome b556, putative [Rhodospirillum
centenum SW]
Length = 138
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 1 ITSVLSITHRGTGVALTAYALGLA----GVGLTTDINSVVSFVDALNLSAPILLAGKFIL 56
+ ++ SITHR TGV L A L LA + + V V L LL ++
Sbjct: 29 LPAIASITHRVTGVGLAAGTLLLAWWLIAAATGPEAFATVQAVAGSPLGLLCLLG--WVW 86
Query: 57 AFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAI 96
AF YH NG+RHL+WD G L + VY GY + G +I
Sbjct: 87 AF--WYHAMNGVRHLLWDAGYGLELGPVYRGGYLVWGGSI 124
>gi|451855678|gb|EMD68969.1| hypothetical protein COCSADRAFT_340668 [Cochliobolus sativus
ND90Pr]
Length = 172
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 1 ITSVLSITHRGTGVAL--------TAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAG 52
I SV S R TG+ L TAY + L G D S+V+ V A + I ++
Sbjct: 62 INSVTSTLQRITGLTLSGSLYLFGTAYLVALY-TGWHMDTTSMVAAVAAWPTA--IKMSV 118
Query: 53 KFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
K LAFP +H NG+R+LIWD G + V TG+ ++G ++ +L +
Sbjct: 119 KAFLAFPFFFHGFNGLRYLIWDAGVGFKSQYVIRTGWTVIGMTVVASLYYAFM 171
>gi|239613339|gb|EEQ90326.1| succinate dehydrogenase cytochrome b560 subunit [Ajellomyces
dermatitidis ER-3]
Length = 278
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 60/111 (54%), Gaps = 11/111 (9%)
Query: 1 ITSVLSITHRGTGVALTA-----YALGLAG--VGLTTDINSVVSFVDALNLSAPILLAGK 53
+TSVLSI HR TG+ ++ +A+ LA +G D S+ + AL ++A +LL +
Sbjct: 138 VTSVLSILHRNTGLLVSGGFYLFFAVYLASPWLGWHIDSASMAASFGALPVAAKVLL--R 195
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTL 104
+A P ++H+ NG+RHLIW L T G +L AIL N T+
Sbjct: 196 TTVALPFTFHSFNGVRHLIWVAMNNL--DSTPTIGPEILLCAILENQFSTM 244
>gi|153868748|ref|ZP_01998495.1| Succinate dehydrogenase, cytochrome b subunit [Beggiatoa sp. PS]
gi|152074659|gb|EDN71493.1| Succinate dehydrogenase, cytochrome b subunit [Beggiatoa sp. PS]
Length = 130
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFIL---A 57
+TS++SI HR TGV L+ L L L ++ A N G F+L +
Sbjct: 17 LTSIMSILHRITGVFLSLGTLVLV-YWLMAAAEGPETYQQAQNFLRS--WWGLFLLFGWS 73
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTG 88
+ YH NGIRHL WD G L IK VY TG
Sbjct: 74 LALFYHLCNGIRHLFWDAGLGLDIKTVYITG 104
>gi|6322708|ref|NP_012781.1| succinate dehydrogenase cytochrome b subunit SDH3 [Saccharomyces
cerevisiae S288c]
gi|464750|sp|P33421.1|SDH3_YEAST RecName: Full=Succinate dehydrogenase [ubiquinone] cytochrome b
subunit, mitochondrial; Flags: Precursor
gi|396438|emb|CAA80957.1| succinate dehydrogenase cytochrome b subunit [Saccharomyces
cerevisiae]
gi|486241|emb|CAA81982.1| SDH3 [Saccharomyces cerevisiae]
gi|51013499|gb|AAT93043.1| YKL141W [Saccharomyces cerevisiae]
gi|285813124|tpg|DAA09021.1| TPA: succinate dehydrogenase cytochrome b subunit SDH3
[Saccharomyces cerevisiae S288c]
gi|392298298|gb|EIW09396.1| Sdh3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 198
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 50 LAGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLG-AAILTNLVLTL 104
+ G F F + H IRHLIWDT + LT+K VY TGYA++G A+L +LTL
Sbjct: 145 IKGSFAYLFAI--HYGGAIRHLIWDTAKELTLKGVYRTGYALIGFTAVLGTYLLTL 198
>gi|313814|emb|CAA52088.1| succinate dehydrogenase cytochrome b subunit [Saccharomyces
cerevisiae]
Length = 198
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 50 LAGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLG-AAILTNLVLTL 104
+ G F F + H IRHLIWDT + LT+K VY TGYA++G A+L +LTL
Sbjct: 145 IKGSFAYLFAI--HYGGAIRHLIWDTAKELTLKGVYRTGYALIGFTAVLGTYLLTL 198
>gi|256269924|gb|EEU05182.1| Sdh3p [Saccharomyces cerevisiae JAY291]
Length = 198
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 50 LAGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLG-AAILTNLVLTL 104
+ G F F + H IRHLIWDT + LT+K VY TGYA++G A+L +LTL
Sbjct: 145 IKGSFAYLFAI--HYGGAIRHLIWDTAKELTLKGVYRTGYALIGFTAVLGTYLLTL 198
>gi|349579428|dbj|GAA24590.1| K7_Sdh3p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 198
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 50 LAGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLG-AAILTNLVLTL 104
+ G F F + H IRHLIWDT + LT+K VY TGYA++G A+L +LTL
Sbjct: 145 IKGSFAYLFAI--HYGGAIRHLIWDTAKELTLKGVYRTGYALIGFTAVLGTYLLTL 198
>gi|151941666|gb|EDN60028.1| succinate dehydrogenase cytochrome b [Saccharomyces cerevisiae
YJM789]
Length = 198
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 50 LAGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLG-AAILTNLVLTL 104
+ G F F + H IRHLIWDT + LT+K VY TGYA++G A+L +LTL
Sbjct: 145 IKGSFAYLFAI--HYGGAIRHLIWDTAKELTLKGVYRTGYALIGFTAVLGTYLLTL 198
>gi|190409697|gb|EDV12962.1| succinate dehydrogenase cytochrome b [Saccharomyces cerevisiae
RM11-1a]
gi|259147700|emb|CAY80950.1| Sdh3p [Saccharomyces cerevisiae EC1118]
Length = 198
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 50 LAGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLG-AAILTNLVLTL 104
+ G F F + H IRHLIWDT + LT+K VY TGYA++G A+L +LTL
Sbjct: 145 IKGSFAYLFAI--HYGGAIRHLIWDTAKELTLKGVYRTGYALIGFTAVLGTYLLTL 198
>gi|323304156|gb|EGA57933.1| Sdh3p [Saccharomyces cerevisiae FostersB]
Length = 198
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 50 LAGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLG-AAILTNLVLTL 104
+ G F F + H IRHLIWDT + LT+K VY TGYA++G A+L +LTL
Sbjct: 145 IKGSFAYLFAI--HYGGAIRHLIWDTAKELTLKGVYRTGYALIGFTAVLGTYLLTL 198
>gi|365764541|gb|EHN06063.1| Sdh3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 194
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 50 LAGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLG-AAILTNLVLTL 104
+ G F F + H IRHLIWDT + LT+K VY TGYA++G A+L +LTL
Sbjct: 141 IKGSFAYLFAI--HYGGAIRHLIWDTAKELTLKGVYRTGYALIGFTAVLGTYLLTL 194
>gi|323332726|gb|EGA74131.1| Sdh3p [Saccharomyces cerevisiae AWRI796]
Length = 194
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 50 LAGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLG-AAILTNLVLTL 104
+ G F F + H IRHLIWDT + LT+K VY TGYA++G A+L +LTL
Sbjct: 141 IKGSFAYLFAI--HYGGAIRHLIWDTAKELTLKGVYRTGYALIGFTAVLGTYLLTL 194
>gi|207343604|gb|EDZ71023.1| YKL141Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 198
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 50 LAGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLG-AAILTNLVLTL 104
+ G F F + H IRHLIWDT + LT+K VY TGYA++G A+L +LTL
Sbjct: 145 IKGSFAYLFAI--HYGGAIRHLIWDTAKELTLKGVYRTGYALIGFTAVLGTYLLTL 198
>gi|323347731|gb|EGA81995.1| Sdh3p [Saccharomyces cerevisiae Lalvin QA23]
Length = 143
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 50 LAGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLG-AAILTNLVLTL 104
+ G F F + H IRHLIWDT + LT+K VY TGYA++G A+L +LTL
Sbjct: 90 IKGSFAYLFAI--HYGGAIRHLIWDTAKELTLKGVYRTGYALIGFTAVLGTYLLTL 143
>gi|401624907|gb|EJS42944.1| sdh3p [Saccharomyces arboricola H-6]
Length = 198
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 50 LAGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLG-AAILTNLVLTL 104
+ G F F + H IRHLIWDT + L++K VY TGYA+LG A+L +LTL
Sbjct: 145 IKGSFAYLFAI--HYGGAIRHLIWDTAKELSLKGVYRTGYALLGFTAVLGTYLLTL 198
>gi|157964193|ref|YP_001499017.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
massiliae MTU5]
gi|157843969|gb|ABV84470.1| Succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
massiliae MTU5]
Length = 124
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 6/103 (5%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFI-LAFP 59
I+S LSI HR TGVAL L + + ++ + L L+ ++ + +++
Sbjct: 25 ISSTLSILHRMTGVALFFVVSILVWWLILSKYDN-----NYLQLAECCIIKICLVAVSYA 79
Query: 60 VSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
YH NGIRHL WD G +IK V TG+ ++ ++L ++L
Sbjct: 80 WFYHLCNGIRHLFWDIGYGFSIKLVNITGWCVVVGSVLLTVLL 122
>gi|157828041|ref|YP_001494283.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
rickettsii str. 'Sheila Smith']
gi|165932739|ref|YP_001649528.1| succinate dehydrogenase cytochrome b556 subunit [Rickettsia
rickettsii str. Iowa]
gi|378720841|ref|YP_005285728.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
rickettsii str. Colombia]
gi|378722194|ref|YP_005287080.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
rickettsii str. Arizona]
gi|378723553|ref|YP_005288437.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
rickettsii str. Hauke]
gi|379016897|ref|YP_005293132.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
rickettsii str. Brazil]
gi|379017341|ref|YP_005293575.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
rickettsii str. Hino]
gi|379018671|ref|YP_005294905.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
rickettsii str. Hlp#2]
gi|379711908|ref|YP_005300247.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
philipii str. 364D]
gi|157800522|gb|ABV75775.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
rickettsii str. 'Sheila Smith']
gi|165907826|gb|ABY72122.1| succinate dehydrogenase cytochrome b556 subunit [Rickettsia
rickettsii str. Iowa]
gi|376325421|gb|AFB22661.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
rickettsii str. Brazil]
gi|376325865|gb|AFB23104.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
rickettsii str. Colombia]
gi|376327218|gb|AFB24456.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
rickettsii str. Arizona]
gi|376328553|gb|AFB25790.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
philipii str. 364D]
gi|376329906|gb|AFB27142.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
rickettsii str. Hino]
gi|376331251|gb|AFB28485.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
rickettsii str. Hlp#2]
gi|376332568|gb|AFB29801.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
rickettsii str. Hauke]
Length = 124
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 7/103 (6%)
Query: 1 ITSVLSITHRGTGVALT-AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFP 59
I+S LSI +R TGVAL A ++ + + L+ N+ + + + I L +++
Sbjct: 25 ISSTLSILYRMTGVALFFAVSILVWWLILSKYDNNYLQLAECCIIK--ICLVA---VSYA 79
Query: 60 VSYHTANGIRHLIWDTGRALTIKKVYTTGYA-MLGAAILTNLV 101
YH NGIRHL WD G +IK V TG+ +LG+ +LT L+
Sbjct: 80 WFYHLCNGIRHLFWDIGYGFSIKLVNITGWCVVLGSVLLTVLL 122
>gi|353526549|ref|YP_004927618.1| succinate dehydrogenase subunit 3 (mitochondrion) [Anomodon
rugelii]
gi|336089475|gb|AEH99665.1| succinate dehydrogenase subunit 3 [Anomodon rugelii]
Length = 131
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 25/36 (69%)
Query: 60 VSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAA 95
+ YH +NGIRHL+WD G L + KVYT+G ML A
Sbjct: 82 LCYHMSNGIRHLLWDLGFFLELSKVYTSGIIMLFCA 117
>gi|328775159|gb|AEB39974.1| succinate dehydrogenase subunit 3 [Funaria hygrometrica]
Length = 131
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 25/36 (69%)
Query: 60 VSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAA 95
+ YH +NGIRHL+WD G L + KVYT+G ML A
Sbjct: 82 LCYHMSNGIRHLLWDLGFFLELSKVYTSGIIMLFCA 117
>gi|335424930|ref|ZP_08553923.1| succinate dehydrogenase subunit C [Salinisphaera shabanensis E1L3A]
gi|334887061|gb|EGM25400.1| succinate dehydrogenase subunit C [Salinisphaera shabanensis E1L3A]
Length = 128
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 6 SITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFIL---AFPVSY 62
SI HR +G+ L+ ++ LA V L + + +F +A G+ ++ +F + Y
Sbjct: 25 SIAHRASGIVLSLGSIFLA-VWLISAASGPDAFASVNGFAASWF--GQLLMFGWSFALFY 81
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYAMLGAA 95
H NGIRHL+WD G L ++ TGY +G A
Sbjct: 82 HLCNGIRHLVWDVGIGLDLETARMTGYVAIGVA 114
>gi|34580878|ref|ZP_00142358.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
sibirica 246]
gi|28262263|gb|EAA25767.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
sibirica 246]
Length = 124
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 56/103 (54%), Gaps = 6/103 (5%)
Query: 1 ITSVLSITHRGTGVALT-AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFP 59
I+S LSI +R TGVAL A ++ + + L+ N+ + + + I L +++
Sbjct: 25 ISSTLSILYRMTGVALFFAVSILVWWLILSQYDNNYLQLAECCIIK--ICLVA---VSYA 79
Query: 60 VSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
YH NGIRHL WD G +IK V TG+ ++ ++L ++L
Sbjct: 80 WFYHLCNGIRHLFWDIGYGFSIKLVNITGWCVVVGSVLLTVLL 122
>gi|83313049|ref|YP_423313.1| succinate dehydrogenase/fumarate reductase, cytochrome b subunit
[Magnetospirillum magneticum AMB-1]
gi|82947890|dbj|BAE52754.1| Succinate dehydrogenase/fumarate reductase, cytochrome b subunit
[Magnetospirillum magneticum AMB-1]
Length = 125
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFIL---A 57
T++LSI+HR TGVAL + LA L + V++ A + L GK +L
Sbjct: 19 FTAILSISHRITGVALAVGTVVLA-YWLASAAYGPVAYGHAQAVLGSWL--GKLVLFGWT 75
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAA 95
+ YH NGIRHL WD GR I + +G ++GAA
Sbjct: 76 AALFYHLCNGIRHLFWDKGRGYEIAEADKSGRMVVGAA 113
>gi|15892091|ref|NP_359805.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
conorii str. Malish 7]
gi|229586366|ref|YP_002844867.1| Succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
africae ESF-5]
gi|383483509|ref|YP_005392422.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
parkeri str. Portsmouth]
gi|21362479|sp|Q92J99.1|DHSC_RICCN RecName: Full=Succinate dehydrogenase cytochrome b556 subunit;
Short=Cytochrome b-556
gi|15619214|gb|AAL02706.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
conorii str. Malish 7]
gi|228021416|gb|ACP53124.1| Succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
africae ESF-5]
gi|378935863|gb|AFC74363.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
parkeri str. Portsmouth]
Length = 124
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 56/103 (54%), Gaps = 6/103 (5%)
Query: 1 ITSVLSITHRGTGVALT-AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFP 59
I+S LSI +R TGVAL A ++ + + L+ N+ + + + I L +++
Sbjct: 25 ISSTLSILYRMTGVALFFAVSILVWWLILSKYDNNYLQLAECCIIK--ICLVA---VSYA 79
Query: 60 VSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
YH NGIRHL WD G +IK V TG+ ++ ++L ++L
Sbjct: 80 WFYHLCNGIRHLFWDIGYGFSIKLVNITGWCVVVGSVLLTVLL 122
>gi|11467108|ref|NP_054409.1| succinate dehydrogenase subunit 3 [Marchantia polymorpha]
gi|543911|sp|P35721.1|C560_MARPO RecName: Full=Succinate dehydrogenase cytochrome b560 subunit;
AltName: Full=Succinate dehydrogenase, subunit III
gi|786193|gb|AAC09406.1| ORF137 [Marchantia polymorpha]
Length = 137
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 60 VSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAA 95
+ YH +NG+RHL+WD G L + KVYT+G ML A
Sbjct: 82 LCYHMSNGVRHLLWDLGFFLELSKVYTSGIIMLFCA 117
>gi|320589791|gb|EFX02247.1| succinate dehydrogenase cytochrome b560 subunit [Grosmannia
clavigera kw1407]
Length = 612
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 13/109 (11%)
Query: 6 SITHRGTGVALTAYALG-----LAG--VGLTTDINSVVSFVDALNLSAPILLAG--KFIL 56
SI HR TG+ G LA +G + S+V+F L P+ L G KF L
Sbjct: 507 SILHRFTGLTYAGLLYGGSLAYLAAPLLGWHLESQSLVTFAAGL----PLALKGVAKFAL 562
Query: 57 AFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
A+P+++H NG RHL+WD + ++ A+ +++++L L L
Sbjct: 563 AWPLAFHFFNGARHLVWDAAVGFSKAEIAKGTTAIWVLSVVSSLGLAFL 611
>gi|367008482|ref|XP_003678741.1| hypothetical protein TDEL_0A01980 [Torulaspora delbrueckii]
gi|359746398|emb|CCE89530.1| hypothetical protein TDEL_0A01980 [Torulaspora delbrueckii]
Length = 177
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 53/101 (52%), Gaps = 12/101 (11%)
Query: 1 ITSVLSITHRGTGVALTA------YALGLA---GVGLTTDINSVVSFVDALNLSAPILLA 51
+T LS HR TGV L + A G++ G+GL T+ N + + + A
Sbjct: 67 LTWYLSSLHRITGVILGSGFFAVTIAFGISTLFGLGLNTE-NLKNYYKEKVPAWADWTAK 125
Query: 52 GKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAML 92
G A+ ++H NGIRHLIWDTG+ LTIK V TG +L
Sbjct: 126 G--TAAYFFAFHFGNGIRHLIWDTGKELTIKGVNRTGIVVL 164
>gi|145348128|ref|XP_001418508.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578737|gb|ABO96801.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 105
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 6 SITHRGTGVALTAYALGLAGV-GLTTDINSVVSFVDALNLSAPI-LLAGKFILAFPVSYH 63
SIT+R TGVALT A+ G+ L +V ++ +AP+ ++ KF L+FP +H
Sbjct: 10 SITNRVTGVALTG-AMSAGGIIALVGGAEAVPMTMEMFKANAPLAVVPVKFALSFPFVFH 68
Query: 64 TANGIRHLIWDT 75
T G RHL+WD+
Sbjct: 69 TLGGFRHLVWDS 80
>gi|339320267|ref|YP_004679962.1| succinate dehydrogenase cytochrome b-556 subunit [Candidatus
Midichloria mitochondrii IricVA]
gi|338226392|gb|AEI89276.1| succinate dehydrogenase cytochrome b-556 subunit [Candidatus
Midichloria mitochondrii IricVA]
Length = 126
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 22/119 (18%)
Query: 1 ITSVLSITHRGTGVAL----------TAYALGLAGVGLTTDINSVVSFV----DALNLSA 46
ITS LSI HR +G+ L Y + G ++I + SF+ + + S
Sbjct: 3 ITSALSILHRVSGLFLFIGFLILLWWLIYCIHNYGYS-ASEILCITSFIVEIREDMIFSI 61
Query: 47 PILLAGKFIL---AFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
GK IL ++ + YH G+RHLIWD G +K+VY +G+ +A++T+LV+
Sbjct: 62 FKHTFGKSILIIWSYSLFYHMLAGVRHLIWDAGLGFKMKQVYLSGW----SAVITSLVM 116
>gi|254448802|ref|ZP_05062259.1| succinate dehydrogenase, cytochrome b556 subunit [gamma
proteobacterium HTCC5015]
gi|198261643|gb|EDY85931.1| succinate dehydrogenase, cytochrome b556 subunit [gamma
proteobacterium HTCC5015]
Length = 119
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 5 LSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDAL--NLSAPILLAGKFILAFPVSY 62
LSI HR TGVAL+ A+ L V L T ++ ++ D L +LSA F++ ++Y
Sbjct: 16 LSILHRATGVALSI-AILLLPVVLLTAVSGGEAY-DCLQQHLSAWYGQVVLFLITLSLNY 73
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTG 88
H NGIRHL WD G +K +G
Sbjct: 74 HLCNGIRHLFWDAGHGFELKSADRSG 99
>gi|323308340|gb|EGA61586.1| Sdh3p [Saccharomyces cerevisiae FostersO]
Length = 194
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 50 LAGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLG 93
+ G F F + H IRHLIWDT + LT+K VY TGYA++G
Sbjct: 141 IKGSFAYLFAI--HYGGAIRHLIWDTAKELTLKGVYRTGYALIG 182
>gi|452963646|gb|EME68708.1| succinate dehydrogenase/fumarate reductase, cytochrome b subunit
[Magnetospirillum sp. SO-1]
Length = 109
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 44/100 (44%), Gaps = 12/100 (12%)
Query: 1 ITSVLSITHRGTGVALT------AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKF 54
T++LSITHR TGVAL AY L A G ++ L A G
Sbjct: 3 FTAILSITHRATGVALAVGTVVLAYWLASAAYGPAAYGHAQAVLGSWLGKLALFGWTGAL 62
Query: 55 ILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGA 94
YH NGIRHL WD GR I + +G ++GA
Sbjct: 63 F------YHLCNGIRHLFWDKGRGYGIAEADKSGRMVVGA 96
>gi|374318907|ref|YP_005065405.1| Succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
slovaca 13-B]
gi|383750804|ref|YP_005425905.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
slovaca str. D-CWPP]
gi|360041455|gb|AEV91837.1| Succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
slovaca 13-B]
gi|379773818|gb|AFD19174.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
slovaca str. D-CWPP]
Length = 124
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 1 ITSVLSITHRGTGVALT-AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFP 59
I+S LSI +R TGVAL A ++ + + L+ N+ + + + I L +++
Sbjct: 25 ISSTLSILYRMTGVALFFAVSILVWWLILSKYDNNYLQLAECCIIK--ICLVA---VSYA 79
Query: 60 VSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
YH NGIRHL WD G +IK V TG+ ++ +L ++L
Sbjct: 80 WFYHLCNGIRHLFWDIGYGFSIKLVNITGWCVVVGPVLLTVLL 122
>gi|353526594|ref|YP_004927662.1| succinate dehydrogenase subunit 3 (mitochondrion) [Treubia
lacunosa]
gi|336089520|gb|AEH99709.1| succinate dehydrogenase subunit 3 [Treubia lacunosa]
Length = 137
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 31/45 (68%), Gaps = 3/45 (6%)
Query: 60 VSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAI---LTNLV 101
+ YH +NG+RHL+WD G L + +VYT+G ML A+ L+N++
Sbjct: 82 LCYHMSNGVRHLLWDLGFFLELSEVYTSGIIMLFCAVFLALSNII 126
>gi|212543951|ref|XP_002152130.1| succinate dehydrogenase, putative [Talaromyces marneffei ATCC
18224]
gi|210067037|gb|EEA21130.1| succinate dehydrogenase, putative [Talaromyces marneffei ATCC
18224]
Length = 200
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 60/116 (51%), Gaps = 14/116 (12%)
Query: 2 TSVLSITHRGTGVALTA----YALGL-------AGVGLTTDINSVVSFVDALNLSAPILL 50
S+ SI R +G+ L +A+G G+ D+ ++VS A +
Sbjct: 87 QSLTSILQRFSGMFLAGGIYVFAIGYLVAPTISPGLEQVFDLETIVS--AAREVPGWAKS 144
Query: 51 AGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTT-GYAMLGAAILTNLVLTLL 105
GKF LA P +YH NG++HL+WD+G L K+++ + + G +++++L L +L
Sbjct: 145 GGKFALALPFTYHFFNGVKHLMWDSGIGLAHKRLFGRFAWIVAGCSVVSSLGLAVL 200
>gi|212543953|ref|XP_002152131.1| succinate dehydrogenase, putative [Talaromyces marneffei ATCC
18224]
gi|210067038|gb|EEA21131.1| succinate dehydrogenase, putative [Talaromyces marneffei ATCC
18224]
Length = 199
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 60/116 (51%), Gaps = 14/116 (12%)
Query: 2 TSVLSITHRGTGVALTA----YALGL-------AGVGLTTDINSVVSFVDALNLSAPILL 50
S+ SI R +G+ L +A+G G+ D+ ++VS A +
Sbjct: 86 QSLTSILQRFSGMFLAGGIYVFAIGYLVAPTISPGLEQVFDLETIVS--AAREVPGWAKS 143
Query: 51 AGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTT-GYAMLGAAILTNLVLTLL 105
GKF LA P +YH NG++HL+WD+G L K+++ + + G +++++L L +L
Sbjct: 144 GGKFALALPFTYHFFNGVKHLMWDSGIGLAHKRLFGRFAWIVAGCSVVSSLGLAVL 199
>gi|341583395|ref|YP_004763886.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
heilongjiangensis 054]
gi|350273179|ref|YP_004884492.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
japonica YH]
gi|340807621|gb|AEK74209.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
heilongjiangensis 054]
gi|348592392|dbj|BAK96353.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
japonica YH]
Length = 124
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 1 ITSVLSITHRGTGVALT-AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFP 59
I+S+LSI +R TGVAL A ++ + + L+ N+ + + + I L +++
Sbjct: 25 ISSILSILYRMTGVALFFAVSILVWWLILSKYDNNYLQLAECCIIK--ICLVA---VSYA 79
Query: 60 VSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
YH NGIRHL WD G +IK V TG G ++ +++LT+L
Sbjct: 80 WFYHLCNGIRHLFWDIGYGFSIKLVNITG----GCVVVGSVLLTVL 121
>gi|163796399|ref|ZP_02190359.1| succinate dehydrogenase, cytochrome b subunit [alpha
proteobacterium BAL199]
gi|159178249|gb|EDP62793.1| succinate dehydrogenase, cytochrome b subunit [alpha
proteobacterium BAL199]
Length = 128
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLT----TDINSVVSFVDALNLSAPILLAGKFIL 56
+TSVLSI+HR TGV L A L L L D +VV L IL + L
Sbjct: 19 LTSVLSISHRATGVGLAAGLLLLTWWLLAAAAGPDSFAVVQDFLGSWLGYLILFGFSYAL 78
Query: 57 AFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAI 96
F H NG+RHL WD G + VY +G+A++ A++
Sbjct: 79 MF----HLCNGVRHLFWDAGWGFELDTVYKSGWAVVIASV 114
>gi|378786331|dbj|BAL63258.1| succinate:cytochrome c oxidoreductase subunit 3 (mitochondrion)
[Pyropia ishigecola]
Length = 129
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 56/108 (51%), Gaps = 12/108 (11%)
Query: 2 TSVLSITHRGTGVALTAYALGLAGVGLTTDIN-------SVVSFVDALNLSAPILLAG-K 53
+S+ SI HR +GV + + L + + L ++ + FVD L P LL +
Sbjct: 20 SSIFSIWHRISGVIM--FVLIVGPIFLLNQVHFLYITVLPIHFFVDYLFF--PWLLTSVR 75
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLV 101
++++ YH +NGIRH WD+ + + +K+Y +L ++TN++
Sbjct: 76 WVVSTIFLYHISNGIRHFFWDSVKHVNTRKMYKDSNYLLLFVLITNII 123
>gi|308805274|ref|XP_003079949.1| unnamed protein product [Ostreococcus tauri]
gi|116058406|emb|CAL53595.1| unnamed protein product [Ostreococcus tauri]
Length = 205
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGV-GLTTDINSVVSFVDALNLSAPILLAG-KFILAF 58
+ ++ SIT+R TGV L+ A+ AGV L +V + ++ + +P+ +A KF L+F
Sbjct: 97 VVALSSITNRVTGVVLSG-AVSSAGVIALVGGAEAVPAVIELVKAQSPVGVAPLKFALSF 155
Query: 59 PVSYHTANGIRHLIWD 74
P +HT G RHL+WD
Sbjct: 156 PFVFHTLGGFRHLVWD 171
>gi|398391016|ref|XP_003848968.1| succinate dehydrogenase cytochrome B subunit, partial [Zymoseptoria
tritici IPO323]
gi|339468844|gb|EGP83944.1| succinate dehydrogenase cytochrome B subunit [Zymoseptoria tritici
IPO323]
Length = 126
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 8/109 (7%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILL--AGKFIL 56
I VLS +R TGVAL+ YA G + I ++ + A P++L A KF +
Sbjct: 21 INMVLSSLNRITGVALSGAFYAFGAIYMIWHPSIETIAAGFAAW----PVVLQVAAKFGV 76
Query: 57 AFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
A P ++H NG HL+WD + +T ++V + ++G + + + L +L
Sbjct: 77 ALPFTFHCFNGASHLVWDAAKMITNRQVTRMAWGVVGLGVGSAMGLAVL 125
>gi|366987197|ref|XP_003673365.1| hypothetical protein NCAS_0A04200 [Naumovozyma castellii CBS 4309]
gi|342299228|emb|CCC66978.1| hypothetical protein NCAS_0A04200 [Naumovozyma castellii CBS 4309]
Length = 204
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 55/113 (48%), Gaps = 10/113 (8%)
Query: 1 ITSVLSITHR------GTGVALTAYALGLAGVGLTTDINSVVSFVDALN--LSAPILLAG 52
+T LS HR G G L G AG+ +D NS +D + +S P A
Sbjct: 93 LTWYLSTCHRISLVFMGFGFYLITILFGAAGLLGFSDFNSN-KLIDWYHTKISTPTKWAI 151
Query: 53 KFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGY-AMLGAAILTNLVLTL 104
K A+ + H IRHL+WD + L++K VY TGY AM AA+ +L+L
Sbjct: 152 KGSFAYLFTLHYGLAIRHLVWDMAKELSLKGVYRTGYGAMAFAALAGTYLLSL 204
>gi|427427346|ref|ZP_18917390.1| Succinate dehydrogenase cytochrome b-556 subunit [Caenispirillum
salinarum AK4]
gi|425883272|gb|EKV31948.1| Succinate dehydrogenase cytochrome b-556 subunit [Caenispirillum
salinarum AK4]
Length = 141
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 13/107 (12%)
Query: 1 ITSVLSITHRGTGVALT------AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKF 54
I LSI HR TGV ++ Y +G A G T ++ + F+ + +LL G F
Sbjct: 34 IEGKLSILHRITGVGISIGMLLLTYWVGAAAYGPET-YDAAMGFIT--SWFGYLLLLG-F 89
Query: 55 ILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGA-AILTNL 100
+AF +HT +GIRHL+WD G LT ++ + YA++ A A+LT L
Sbjct: 90 SVAF--FFHTVSGIRHLVWDVGVGLTKEEARRSSYAVIAATAVLTVL 134
>gi|224009964|ref|XP_002293940.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970612|gb|EED88949.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 191
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 6/107 (5%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALN----LSAPILLAG-KFI 55
+ ++ SI R TG L+ A GL V + + +S + + + + +AG KF
Sbjct: 81 VCALSSIATRVTGCILSFGAAGLGIVEIFGGSGAALSTMQCIGSGEMVGGALFVAGAKFS 140
Query: 56 LAFPVSYHTANGIRHLIWD-TGRALTIKKVYTTGYAMLGAAILTNLV 101
+AFP +YH G+RHL+WD + LT V Y +LGA++L + V
Sbjct: 141 VAFPFAYHYLGGLRHLVWDNSPEMLTNVDVEKASYGLLGASVLLSSV 187
>gi|378733910|gb|EHY60369.1| succinate dehydrogenase (ubiquinone) cytochrome B subunit
[Exophiala dermatitidis NIH/UT8656]
Length = 201
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 27 GLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYT 86
G D S+V + AL + A K + A+P +H +G RHLIWDTG LT ++V
Sbjct: 125 GWHLDTTSMVEWFGALPWG--VRTATKAVFAWPFMFHIVHGSRHLIWDTGAMLTNRQVII 182
Query: 87 TGY 89
+G+
Sbjct: 183 SGW 185
>gi|242788126|ref|XP_002481157.1| succinate dehydrogenase, putative [Talaromyces stipitatus ATCC
10500]
gi|218721304|gb|EED20723.1| succinate dehydrogenase, putative [Talaromyces stipitatus ATCC
10500]
Length = 194
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 30 TDINSVVSFVDAL-NLSAPILLAGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTT- 87
TD+ + + V AL + I GKF L+ P +YH NG++HL+WD G L+ K+ +
Sbjct: 117 TDLFDIETIVGALREVPGWIKGVGKFALSMPFTYHFYNGVKHLMWDLGVGLSHKRFFGRL 176
Query: 88 GYAMLGAAILTNLVLTLL 105
+ + G +++++L L +L
Sbjct: 177 AWVVAGFSVVSSLGLAVL 194
>gi|407925917|gb|EKG18891.1| Succinate dehydrogenase/Fumarate reductase transmembrane subunit
[Macrophomina phaseolina MS6]
Length = 178
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%)
Query: 50 LAGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTL 104
+A K LAFP YH+ NG+RHL WD + K V TG+ ++G ++ L L
Sbjct: 121 VATKTFLAFPFVYHSVNGLRHLAWDFAVGINNKAVIKTGWTVVGITAVSTLALAF 175
>gi|50286141|ref|XP_445499.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524804|emb|CAG58410.1| unnamed protein product [Candida glabrata]
Length = 181
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 1 ITSVLSITHR---GTGVALTA-YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFIL 56
++SV I+H GT LT + LG G+ T+ S ++ I+ AG
Sbjct: 76 MSSVHRISHLILGGTFYVLTILFGLGYFVSGINTESVSQWYHKHVSPMTEQIVKAG---F 132
Query: 57 AFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLG 93
AF ++H + IRH IWD + LT+K VY TGY++L
Sbjct: 133 AFTFAFHYFSTIRHYIWDFAKELTLKGVYRTGYSVLA 169
>gi|339504581|ref|YP_004692001.1| succinate dehydrogenase cytochrome b556 subunit SdhC [Roseobacter
litoralis Och 149]
gi|338758574|gb|AEI95038.1| succinate dehydrogenase cytochrome b556 subunit SdhC [Roseobacter
litoralis Och 149]
Length = 127
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 28/44 (63%), Gaps = 4/44 (9%)
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
YHT G+RHLIWD G L I+ Y GYA++G + VLTLL
Sbjct: 83 YHTLAGVRHLIWDQGIGLDIETAYKMGYAVIGGS----FVLTLL 122
>gi|73666822|ref|YP_302838.1| succinate dehydrogenase subunit C [Ehrlichia canis str. Jake]
gi|72393963|gb|AAZ68240.1| succinate dehydrogenase subunit C [Ehrlichia canis str. Jake]
Length = 136
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 47/103 (45%), Gaps = 5/103 (4%)
Query: 5 LSITHRGTG----VALTAYALGLAGVGLTTDI-NSVVSFVDALNLSAPILLAGKFILAFP 59
LSI HR TG V L + G+ L I + +F L+ FI
Sbjct: 28 LSIMHRFTGMLLFVGLFIISWGIIAAFLFPKIIYEIYNFFSTCYLALYSFKLIAFIWLNI 87
Query: 60 VSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
SYH NGIRHL+WD G LT V TG ++ I+++ +L
Sbjct: 88 FSYHYLNGIRHLLWDLGFCLTKSAVKVTGIIVVCLCIISSFIL 130
>gi|217039529|gb|ACJ76893.1| mitochondrial succinate dehydrogenase cytochrome b560 subunit C
[Alternaria alternata]
Length = 177
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 9/112 (8%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGV-----GLTTDINSVVSFVDALNLSAPILLAGK 53
IT S +R TG+ L+ Y G+A + G + S+V+ V A A + K
Sbjct: 67 ITWYASSLNRITGITLSGSLYLFGIAYLIAPYTGWHLETQSMVATVAAW--PAAVKAGLK 124
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
AFP +H+ NG+RHL WD G ++V TG+ +G + +L T L
Sbjct: 125 AFYAFPFFFHSFNGLRHLAWDVGIGFKNQQVIRTGWTAVGLTVAFSLYYTFL 176
>gi|449298247|gb|EMC94264.1| hypothetical protein BAUCODRAFT_36733 [Baudoinia compniacensis UAMH
10762]
Length = 186
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 36/53 (67%)
Query: 53 KFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
K I+A+ +YH+ NG+RHL+WD ++ K+V TG+A++G + + + L LL
Sbjct: 134 KAIVAWFFTYHSFNGVRHLMWDMASMISNKQVNQTGWAVVGLSTVAAVGLALL 186
>gi|381167927|ref|ZP_09877132.1| Succinate dehydrogenase cytochrome b556 subunit [Phaeospirillum
molischianum DSM 120]
gi|380683003|emb|CCG41944.1| Succinate dehydrogenase cytochrome b556 subunit [Phaeospirillum
molischianum DSM 120]
Length = 125
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPIL--LAGKFIL-- 56
T+VLSI+HR TGV + L LA DA + +L + G+ +L
Sbjct: 19 FTAVLSISHRITGVVMAVGTLVLAYWLAAAAYGP-----DAYATAQAVLGSVPGRLLLFG 73
Query: 57 -AFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAI 96
+ + YH NGIRH+ WD G I+ +GY +GAA+
Sbjct: 74 WSVALFYHLCNGIRHMFWDAGMGFEIRDAVKSGYITVGAAL 114
>gi|315052622|ref|XP_003175685.1| succinate dehydrogenase cytochrome B subunit [Arthroderma gypseum
CBS 118893]
gi|311341000|gb|EFR00203.1| succinate dehydrogenase cytochrome B subunit [Arthroderma gypseum
CBS 118893]
Length = 192
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 15/98 (15%)
Query: 1 ITSVLSITHRGTGVALTA----YALG-LAGVGLTTDINSVVSFVDALNLS-APILLAGK- 53
+TSV S R TG L+ +A+ LA L D++S D+L+ + A + AGK
Sbjct: 90 VTSVNSSLQRITGAVLSGSLYLFAVSYLASPYLGWDLSS-----DSLSAAMASLPWAGKA 144
Query: 54 ---FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTG 88
F++A+P +H N +RHL WD G+ +K V TG
Sbjct: 145 TVKFVIAWPFMFHVFNSLRHLAWDIGKGFAMKTVSQTG 182
>gi|110678932|ref|YP_681939.1| succinate dehydrogenase, cytochrome b556 subunit [Roseobacter
denitrificans OCh 114]
gi|109455048|gb|ABG31253.1| succinate dehydrogenase, cytochrome b556 subunit [Roseobacter
denitrificans OCh 114]
Length = 127
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 28/44 (63%), Gaps = 4/44 (9%)
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
YHT G+RHLIWD G L I+ Y GYA++G + VLTLL
Sbjct: 83 YHTLAGVRHLIWDQGIGLDIETAYKLGYAVIGGS----FVLTLL 122
>gi|385153550|ref|YP_006234154.1| succinate:cytochrome c oxidoreductase subunit 3 (mitochondrion)
[Pyropia haitanensis]
gi|384034953|gb|AFH57665.1| succinate:cytochrome c oxidoreductase subunit 3 (mitochondrion)
[Pyropia haitanensis]
Length = 129
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 12/104 (11%)
Query: 2 TSVLSITHRGTGVAL----TAYALGLAGVGLTTDI----NSVVSFVDALNLSAPILLAGK 53
TS SI HR +G+ L T + L V + I SV ++ L +L++ K
Sbjct: 20 TSTFSIWHRISGIILFVSTTCFIFFLNNVYFSYTIILFTKSVFEYI----LFNWLLVSCK 75
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAIL 97
++ YH+ NG+RHL WD+ + I K++ G +L IL
Sbjct: 76 LLIIITFLYHSINGMRHLFWDSVIHVNILKMHEDGNILLFFVIL 119
>gi|379022523|ref|YP_005299184.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
canadensis str. CA410]
gi|376323461|gb|AFB20702.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
canadensis str. CA410]
Length = 124
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPV 60
I+S LSI HR TGVAL LA + + ++ ++ + + L+A +++
Sbjct: 25 ISSTLSILHRITGVALFFAVSILAWWLILSKYDNNYLYLASCYIIKICLVA----VSYAW 80
Query: 61 SYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
YH NGIR+L W G +IK V TG+ ++ + L ++L
Sbjct: 81 FYHLCNGIRYLFWGIGYCFSIKAVNITGWCVVICSTLLTILL 122
>gi|157803312|ref|YP_001491861.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
canadensis str. McKiel]
gi|157784575|gb|ABV73076.1| Succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
canadensis str. McKiel]
Length = 124
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPV 60
I+S LSI HR TGVAL LA + + ++ ++ + + L+A +++
Sbjct: 25 ISSTLSILHRITGVALFFAVSILAWWLILSKYDNNYLYLASCYIIKICLVA----VSYAW 80
Query: 61 SYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
YH NGIR+L W G +IK V TG+ ++ + L ++L
Sbjct: 81 FYHLCNGIRYLFWAIGYCFSIKAVNITGWCVVICSTLLTILL 122
>gi|159045407|ref|YP_001534201.1| putative succinate dehydrogenase cytochrome subunit B
[Dinoroseobacter shibae DFL 12]
gi|157913167|gb|ABV94600.1| putative succinate dehydrogenase cytochrome b subunit
[Dinoroseobacter shibae DFL 12]
Length = 127
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 18/110 (16%)
Query: 1 ITSVLSITHRGTGVAL------TAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKF 54
+TSV SI R TG AL + L A G +FVD L S GK
Sbjct: 22 LTSVTSILTRITGNALLVGALLCVWWLIAAAAG-----PEYFAFVDGLVTS----WFGKL 72
Query: 55 IL---AFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLV 101
+ + + YHT G+RHLIWD G +K Y GY ++G +++ ++
Sbjct: 73 VFLGSIWALWYHTLAGVRHLIWDAGYGFELKDAYALGYMVIGGSVVLTVI 122
>gi|330929855|ref|XP_003302800.1| hypothetical protein PTT_14754 [Pyrenophora teres f. teres 0-1]
gi|311321608|gb|EFQ89104.1| hypothetical protein PTT_14754 [Pyrenophora teres f. teres 0-1]
Length = 177
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 9/111 (8%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGV-----GLTTDINSVVSFVDALNLSAPILLAGK 53
IT + S +R TG+ L+ Y G+A + G + S+V+ V A A + K
Sbjct: 67 ITWLASSLNRITGIVLSGSLYLFGIAYLVAPYTGWHLETQSMVATVAAW--PAAVKAGLK 124
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTL 104
AFP +H+ NG+RHL WD G ++V TG+ ++G + L T
Sbjct: 125 AFYAFPFFFHSLNGLRHLAWDVGVGFKNQQVIRTGWGVVGLTAVMGLYYTF 175
>gi|378786337|dbj|BAL63262.1| succinate:cytochrome c oxidoreductase subunit 3 (mitochondrion)
[Porphyra moriensis]
Length = 129
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 2 TSVLSITHRGTGVAL----TAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILA 57
+S+ SI HR +GV + ++ L L + + +V + +LS +L++ + +++
Sbjct: 20 SSIFSIWHRISGVVMFILISSPILLLNYIYFSHCPIFLVHLLLYYDLSTWLLISFRLLIS 79
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTG 88
YH +NGIRH +WD+ + +T KK+Y
Sbjct: 80 TIFLYHISNGIRHFLWDSVKHVTTKKIYKDS 110
>gi|367037807|ref|XP_003649284.1| hypothetical protein THITE_2169343 [Thielavia terrestris NRRL 8126]
gi|346996545|gb|AEO62948.1| hypothetical protein THITE_2169343 [Thielavia terrestris NRRL 8126]
Length = 188
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 27 GLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYT 86
G + S+ + AL L+A L KF+ A+P +YH NG+RHL +D G + +
Sbjct: 111 GWHLESASLAAAFGALPLAAKGAL--KFLAAWPFAYHAVNGVRHLAFDLGYGFKRQTIVK 168
Query: 87 TGYAMLGAAILTNLVLTLL 105
TG+ + G +++ L L
Sbjct: 169 TGWYIWGVSVVGGLYLAFF 187
>gi|347758674|ref|YP_004866236.1| succinate dehydrogenase, cytochrome b556 subunit [Micavibrio
aeruginosavorus ARL-13]
gi|347591192|gb|AEP10234.1| succinate dehydrogenase, cytochrome b556 subunit [Micavibrio
aeruginosavorus ARL-13]
Length = 145
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPI---LLAGKFILA 57
IT LSI HR +G+AL A L + + I S P+ L G
Sbjct: 24 ITMALSILHRMSGMALAIGAFVLVWMLVAAAIGPEAYAFFQKAASHPVGTLFLVG---WT 80
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAML 92
F + +H NGIRHL WD GR IK +G+ +L
Sbjct: 81 FALIFHGLNGIRHLFWDIGRGFEIKTAKESGWLVL 115
>gi|119572988|gb|EAW52603.1| succinate dehydrogenase complex, subunit C, integral membrane
protein, 15kDa, isoform CRA_f [Homo sapiens]
Length = 64
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 5 LSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
+SI HRGTG+AL+A G++ + L + S + V +L L ++ KF L FP+ Y
Sbjct: 3 MSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELVKSLCLGPALIHTAKFALVFPLMY 62
Query: 63 HT 64
HT
Sbjct: 63 HT 64
>gi|392383580|ref|YP_005032777.1| succinate dehydrogenase, cytochrome b subunit [Azospirillum
brasilense Sp245]
gi|356878545|emb|CCC99432.1| succinate dehydrogenase, cytochrome b subunit [Azospirillum
brasilense Sp245]
Length = 129
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 2 TSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPIL-LAGKFILAFPV 60
T++LSITHR TGV L L L L S ++ A + L F + +
Sbjct: 21 TALLSITHRITGVGLAVGTL-LLTWWLVAAATSPAAYERAQHFIGSFFGLLLMFGWSLAL 79
Query: 61 SYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAA 95
YH NGIRHL+WD G+A + + ++GAA
Sbjct: 80 YYHLCNGIRHLVWDAGKAFELSEADRGNQIVIGAA 114
>gi|365986843|ref|XP_003670253.1| hypothetical protein NDAI_0E01940 [Naumovozyma dairenensis CBS 421]
gi|343769023|emb|CCD25010.1| hypothetical protein NDAI_0E01940 [Naumovozyma dairenensis CBS 421]
Length = 235
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 56 LAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAIL 97
A+ + H A +RHLIWD + L++K VY TGYA +G A L
Sbjct: 186 FAYMFTLHYALSVRHLIWDMAKELSLKGVYRTGYAAMGFAAL 227
>gi|378786346|dbj|BAL63268.1| succinate:cytochrome c oxidoreductase subunit 3 (mitochondrion)
[Pyropia haitanensis]
Length = 129
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 12/104 (11%)
Query: 2 TSVLSITHRGTGVAL----TAYALGLAGVGLTTDI----NSVVSFVDALNLSAPILLAGK 53
TS SI HR +G+ L T + L V + I S+ ++ L +L++ K
Sbjct: 20 TSTFSIWHRISGIILFVSTTCFIFFLNNVYFSYTIILFTKSIFEYI----LFNWLLVSCK 75
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAIL 97
++ YH+ NG+RHL WD+ + I K++ G +L IL
Sbjct: 76 LLIIITFLYHSINGMRHLFWDSVIHVNILKMHEDGNILLFFVIL 119
>gi|402080996|gb|EJT76141.1| succinate dehydrogenase cytochrome B subunit [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 185
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 53 KFILAFPVSYHTANGIRHLIWDTGRAL 79
KF+LA+P ++H+ NG+RHL WDT R
Sbjct: 132 KFLLAWPFTFHSFNGVRHLFWDTARGF 158
>gi|171693117|ref|XP_001911483.1| hypothetical protein [Podospora anserina S mat+]
gi|170946507|emb|CAP73308.1| unnamed protein product [Podospora anserina S mat+]
Length = 184
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 9/107 (8%)
Query: 6 SITHRGTGVALTA--YALGLAGV-----GLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
SI R TG L+ Y G A + G + S+VS AL + + KF++A+
Sbjct: 79 SIWQRFTGSGLSGGLYVFGAAYLAAPLLGWHLESASLVSAFGALPFA--VKSGVKFLVAW 136
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
P ++H NG+RHL D G + +++ G+ + GA++++ L L
Sbjct: 137 PFAFHAFNGVRHLALDLGMFMKRQQIVKGGWYIWGASLVSGLYLAFF 183
>gi|386828385|ref|ZP_10115492.1| succinate dehydrogenase, cytochrome b556 subunit [Beggiatoa alba
B18LD]
gi|386429269|gb|EIJ43097.1| succinate dehydrogenase, cytochrome b556 subunit [Beggiatoa alba
B18LD]
Length = 127
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 14/89 (15%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFI----- 55
+TS SI HR TGV L+ L + L ++++ ++ + ++ G +I
Sbjct: 19 LTSFTSIVHRATGVFLS-----LGTIALVYWLSAIAGGEESYKTAQGLI--GSWIGLLLL 71
Query: 56 LAFPVS--YHTANGIRHLIWDTGRALTIK 82
A+ VS YH ANGIRHL WD G L IK
Sbjct: 72 FAWSVSLFYHLANGIRHLFWDMGHGLEIK 100
>gi|385099757|ref|YP_006234365.1| sdh3 gene product (mitochondrion) [Huperzia squarrosa]
gi|359741363|gb|AEV55711.1| succinate dehydrogenase subunit 3 (mitochondrion) [Huperzia
squarrosa]
Length = 137
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 7/98 (7%)
Query: 1 ITSVLSITHRGTGVALTAYAL------GLAGVGLTTDINSVVSFVDALNLSAPILLAGKF 54
+TS I HR +G L L G+ + LT + F ++
Sbjct: 18 LTSTFPIFHRISGAFLATMVLFSILFFGIGDLSLTFYYSHTFVFFPTFYFHW-FIILLVN 76
Query: 55 ILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAML 92
+ + YH +NG+RHL WD G L + +VYT+G ML
Sbjct: 77 LTLLALCYHPSNGVRHLWWDWGLFLELSRVYTSGIIML 114
>gi|403215992|emb|CCK70490.1| hypothetical protein KNAG_0E02290 [Kazachstania naganishii CBS
8797]
Length = 175
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 1 ITSVLSITHR------GTGVALTAYALGLAGVGLTTDINS--VVSFVDAL--NLSAPILL 50
I+ LS HR GTG + ++G+ + D S VV + N++A +
Sbjct: 60 ISWYLSSLHRITGIFLGTGFFVLTISVGIGSLFGGEDCRSTAVVRITEWYRHNVNAKLDY 119
Query: 51 AGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILT 98
+ + A+ ++H NG+RHL+WD G+ L+ VY TG +L ++LT
Sbjct: 120 GMRAVTAYFFAFHGWNGVRHLVWDMGKELSNCGVYRTGVGVLVLSVLT 167
>gi|359409198|ref|ZP_09201666.1| succinate dehydrogenase, cytochrome b556 subunit [SAR116 cluster
alpha proteobacterium HIMB100]
gi|356675951|gb|EHI48304.1| succinate dehydrogenase, cytochrome b556 subunit [SAR116 cluster
alpha proteobacterium HIMB100]
Length = 125
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSF-VDALNLSAPILLAGKFIL--- 56
+ +++SI+HR +GV L++ + L V L SF V + +S P G+ IL
Sbjct: 18 LPALMSISHRLSGVVLSSGTI-LVAVWLMMLAAGEDSFAVAQMVVSHPF---GQLILFGY 73
Query: 57 AFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAI 96
+ + YH NG+RHL WD L I +Y +G LG A
Sbjct: 74 SVALFYHACNGVRHLFWDAVIGLNIPAIYKSGQVALGIAF 113
>gi|403213772|emb|CCK68274.1| hypothetical protein KNAG_0A06120 [Kazachstania naganishii CBS
8797]
Length = 183
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 57 AFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLG-AAILTNLVLTL 104
A+ + H IRH+ WD + LT+K VY TGYA+LG AA+ +LTL
Sbjct: 135 AYLFALHYGGAIRHMFWDLAKELTLKGVYRTGYAVLGFAAVAGTYLLTL 183
>gi|194743916|ref|XP_001954444.1| GF18264 [Drosophila ananassae]
gi|190627481|gb|EDV43005.1| GF18264 [Drosophila ananassae]
Length = 281
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 1 ITSVLSITHRGTGVALTAY--ALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+TS LSI R +G L + ALG++G+ ++ ++ V + L K ++A
Sbjct: 118 LTSGLSICLRISGFVLGVFVWALGISGLICQGNMEEFLTKVQDCDCDTLRTLT-KVMVAI 176
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGY 89
P +YH G RHLIW +I +VY TGY
Sbjct: 177 PFAYHMVAGTRHLIWYLNLFTSIPEVYATGY 207
>gi|386800425|ref|YP_006280892.1| sdh3 gene product (mitochondrion) [Pyropia yezoensis]
gi|378786302|dbj|BAL63239.1| succinate: cytochrome c oxidoreductase subunit 3 (mitochondrion)
[Pyropia yezoensis]
gi|384034984|gb|AFH57695.1| succinate:cytochrome c oxidoreductase subunit 3 (mitochondrion)
[Pyropia yezoensis]
Length = 129
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 2 TSVLSITHRGTGVALTAYALG----LAGV-GLTTDINSVVSFVDALNLSAPILLAGKFIL 56
+S+ SI HR +GV + +G L V L I + FVD L L + ++++
Sbjct: 20 SSIFSIWHRISGVIMFVLIVGPILLLNQVYFLYITILPIHFFVDHLFFPW-FLTSVRWVV 78
Query: 57 AFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLV 101
+ YH +NGIRH WD+ + + +K+Y +L ++ N++
Sbjct: 79 SAIFLYHISNGIRHFFWDSVKHVNTRKMYKDSNYLLLFLLIVNII 123
>gi|412985525|emb|CCO18971.1| predicted protein [Bathycoccus prasinos]
Length = 235
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGV-GLTTDINSVVSFVDALNLSAPIL-LAGKFILAF 58
I ++ SIT+R TG L+ A+G+ GV +V V+ P+L K +L+F
Sbjct: 127 IVALSSITNRVTGCVLSG-AVGVGGVIACVGGPEAVPETVELFKSQFPLLVFPAKAMLSF 185
Query: 59 PVSYHTANGIRHLIWD 74
P YH G+RH+IWD
Sbjct: 186 PFVYHGVAGLRHVIWD 201
>gi|255261406|ref|ZP_05340748.1| succinate dehydrogenase, cytochrome b556 subunit [Thalassiobium sp.
R2A62]
gi|255103741|gb|EET46415.1| succinate dehydrogenase, cytochrome b556 subunit [Thalassiobium sp.
R2A62]
Length = 127
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAM-LGAAILTNLVLTLL 105
F + + YH G+RHLIWD G L ++ Y GYAM +G+ +LT L + +L
Sbjct: 75 FASTWAIWYHLLGGLRHLIWDMGYGLDLQSAYNMGYAMIIGSLLLTVLTVIVL 127
>gi|53804146|ref|YP_114003.1| succinate dehydrogenase, cytochrome b556 subunit [Methylococcus
capsulatus str. Bath]
gi|53757907|gb|AAU92198.1| putative succinate dehydrogenase, cytochrome b556 subunit
[Methylococcus capsulatus str. Bath]
Length = 138
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 16/88 (18%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPIL-----LAGKFI 55
+T++LSI+HR TGV L G+GL + ++S V + AP+ +AG+ +
Sbjct: 29 VTALLSISHRITGVLL--------GIGLIGLVLVLMSVVQGPSAYAPVHAFLSGIAGRSL 80
Query: 56 LAFPVS---YHTANGIRHLIWDTGRALT 80
L ++ +H ++GIRHL+WDTG +
Sbjct: 81 LWIWITALLFHLSHGIRHLVWDTGHGFS 108
>gi|254586589|ref|XP_002498862.1| ZYRO0G20350p [Zygosaccharomyces rouxii]
gi|238941756|emb|CAR29929.1| ZYRO0G20350p [Zygosaccharomyces rouxii]
Length = 178
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 24/107 (22%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLA-------GVGLTTD------INSVVSFVDALNLS 45
+T LS HR +GV L A Y L +A G+GL T+ V ++ D
Sbjct: 68 MTWYLSSLHRVSGVMLGAAFYCLTIAFGVSTLFGLGLNTENLTTWYKEKVPTWFD----- 122
Query: 46 APILLAGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAML 92
K +A+ ++H +NG+RHL+WD G+ +T V TG+A+L
Sbjct: 123 ----WTAKGGVAYLFAFHISNGVRHLVWDLGKQVTNPGVIRTGWAVL 165
>gi|378786325|dbj|BAL63254.1| succinate:cytochrome c oxidoreductase subunit 3 (mitochondrion)
[Pyropia katadae]
Length = 129
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 1 ITSVLSITHRGTGVAL----TAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFIL 56
I+S SI HR +GV + ++ L L V + +V + LS IL++ + ++
Sbjct: 19 ISSTFSIWHRISGVVMFILISSPILILNQVYFSYTPIFLVEILLNYILSNWILVSFRLLI 78
Query: 57 AFPVSYHTANGIRHLIWDTGRALTIKKVY 85
+ YH +NG RH +WD+ R + KK+Y
Sbjct: 79 STIFLYHISNGFRHFLWDSVRHINTKKIY 107
>gi|338983233|ref|ZP_08632450.1| Succinate dehydrogenase, cytochrome b subunit [Acidiphilium sp. PM]
gi|338207830|gb|EGO95750.1| Succinate dehydrogenase, cytochrome b subunit [Acidiphilium sp. PM]
Length = 146
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPIL-LAGKFILAFP 59
ITS LSI HR TGVAL+A L + L S +F A + IL + F F
Sbjct: 37 ITSTLSILHRITGVALSA-GAVLLSLWLAAAATSSGAFSVAQAIVGSILGMIVLFGFTFA 95
Query: 60 VSYHTANGIRHLIWDTGRALTIKKVYTT 87
+ YH NGIRHL+WD G + V+ +
Sbjct: 96 LFYHFCNGIRHLLWDAGVGFELPSVHRS 123
>gi|189184864|ref|YP_001938649.1| succinate dehydrogenase cytochrome b-556 subunit [Orientia
tsutsugamushi str. Ikeda]
gi|189181635|dbj|BAG41415.1| succinate dehydrogenase cytochrome b-556 subunit [Orientia
tsutsugamushi str. Ikeda]
Length = 127
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 1 ITSVLSITHRGTGVA------LTAYALGLAGVGLTTDINSVVSFVDAL-NLSAPILLAGK 53
++ +LSI HR +G+A + + L L + +D + VV VD NL L+
Sbjct: 23 MSMILSILHRLSGMAVFGGASIITWWLILC---VYSDFDRVV--VDIFYNLWFQALI--- 74
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAIL 97
++ F +H GIRHLIWDTG +IK + +G+ + +I+
Sbjct: 75 YLTIFTTCFHLCTGIRHLIWDTGYGFSIKYINISGWIAVALSII 118
>gi|407772361|ref|ZP_11119663.1| succinate dehydrogenase cytochrome b-556 subunit [Thalassospira
profundimaris WP0211]
gi|407284314|gb|EKF09830.1| succinate dehydrogenase cytochrome b-556 subunit [Thalassospira
profundimaris WP0211]
Length = 126
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 28/44 (63%), Gaps = 4/44 (9%)
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
YH NGIRHL+WDTGR LT + +LGAA+ VLT+L
Sbjct: 80 YHACNGIRHLVWDTGRGLTNEGAAKGNPIVLGAAV----VLTIL 119
>gi|389809772|ref|ZP_10205469.1| succinate dehydrogenase, cytochrome b subunit [Rhodanobacter
thiooxydans LCS2]
gi|388441487|gb|EIL97756.1| succinate dehydrogenase, cytochrome b subunit [Rhodanobacter
thiooxydans LCS2]
Length = 130
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 10/102 (9%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPIL--LAGKFIL-- 56
+TSVLSI HR TGV L+ + V L + +V DA ++ L G +L
Sbjct: 20 LTSVLSILHRITGVLLS-----VGSVLLVAWLVAVADGGDAYAMADRWLHSWVGMLLLLG 74
Query: 57 -AFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAIL 97
F + YH NGIRHL WD + +Y +G+ ++ +++
Sbjct: 75 WIFALFYHLCNGIRHLAWDLDFGFELGSIYRSGWTVVAVSVI 116
>gi|326404267|ref|YP_004284349.1| succinate dehydrogenase cytochrome b subunit [Acidiphilium
multivorum AIU301]
gi|325051129|dbj|BAJ81467.1| succinate dehydrogenase cytochrome b subunit [Acidiphilium
multivorum AIU301]
Length = 147
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPIL-LAGKFILAFP 59
ITS LSI HR TGVAL+A L + L S +F A + IL + F F
Sbjct: 38 ITSTLSILHRITGVALSA-GAVLLSLWLAAAATSSGAFSVAQAIVGSILGMIVLFGFTFA 96
Query: 60 VSYHTANGIRHLIWDTGRALTIKKVYTT 87
+ YH NGIRHL+WD G + V+ +
Sbjct: 97 LFYHFCNGIRHLLWDAGVGFELPSVHRS 124
>gi|116199017|ref|XP_001225320.1| hypothetical protein CHGG_07664 [Chaetomium globosum CBS 148.51]
gi|88178943|gb|EAQ86411.1| hypothetical protein CHGG_07664 [Chaetomium globosum CBS 148.51]
Length = 188
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 26 VGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVY 85
VG + S+ + AL +A L KF+ A+P ++H NG+RHL++D + +
Sbjct: 110 VGWHLESASLAAAFGALPFAAKGAL--KFLAAWPFAFHAINGVRHLLFDMAVGFKRQTIV 167
Query: 86 TTGYAMLGAAILTNLVLTLL 105
+G+ + GA++++ L L
Sbjct: 168 KSGWYIWGASVVSGLYLAFF 187
>gi|344940254|ref|ZP_08779542.1| succinate dehydrogenase, cytochrome b556 subunit [Methylobacter
tundripaludum SV96]
gi|344261446|gb|EGW21717.1| succinate dehydrogenase, cytochrome b556 subunit [Methylobacter
tundripaludum SV96]
Length = 129
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 8/107 (7%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGV--GLTTDINSVVSFVDALNLSAPILLAGKFILAF 58
+T ++SITHR TG+ LTA + V L +S + ++L L+ FI A
Sbjct: 20 LTGIISITHRMTGIMLTAGLILFVYVISALAGGADSYTAMQALMSLWLFKLVIWAFIYA- 78
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
+ +H +G+RHLIWD+G + + + YAM+ A +L LTL+
Sbjct: 79 -LFFHLCHGVRHLIWDSGSSFELDTL--NRYAMIELA--ASLALTLM 120
>gi|148260873|ref|YP_001235000.1| succinate dehydrogenase, cytochrome b subunit [Acidiphilium cryptum
JF-5]
gi|146402554|gb|ABQ31081.1| succinate dehydrogenase subunit C [Acidiphilium cryptum JF-5]
Length = 143
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPIL-LAGKFILAFP 59
ITS LSI HR TGVAL+A L + L S +F A + IL + F F
Sbjct: 34 ITSTLSILHRITGVALSA-GAVLLSLWLAAAATSSGAFSVAQAIVGSILGMIVLFGFTFA 92
Query: 60 VSYHTANGIRHLIWDTGRALTIKKVYTT 87
+ YH NGIRHL+WD G + V+ +
Sbjct: 93 LFYHFCNGIRHLLWDAGVGFELPSVHRS 120
>gi|148284919|ref|YP_001249009.1| succinate dehydrogenase, cytochrome b556 subunit [Orientia
tsutsugamushi str. Boryong]
gi|146740358|emb|CAM80791.1| succinate dehydrogenase, cytochrome b556 subunit [Orientia
tsutsugamushi str. Boryong]
Length = 116
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 15/104 (14%)
Query: 1 ITSVLSITHRGTGVA------LTAYALGLAGVGLTTDINSVVSFVDAL-NLSAPILLAGK 53
++ +LSI HR +G+A + + L L + +D + +V VD NL L+
Sbjct: 12 MSMILSILHRLSGMAVFGGASIITWWLILC---VYSDFDRIV--VDIFYNLWFQALI--- 63
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAIL 97
++ F +H GIRHLIWDTG +IK + +G+ + +I+
Sbjct: 64 YLTIFTTCFHLCTGIRHLIWDTGYGFSIKYINISGWIAVALSII 107
>gi|255073203|ref|XP_002500276.1| predicted protein [Micromonas sp. RCC299]
gi|226515538|gb|ACO61534.1| predicted protein [Micromonas sp. RCC299]
Length = 202
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 1 ITSVLSITHRGTGVALT---AYALGLAGVGLTTDINSVVSFVDALNLSAPIL-LAGKFIL 56
+ ++ SIT+R TG L+ A+ L VG ++ +F++ + P L K ++
Sbjct: 94 VVALSSITNRVTGCVLSGAVAFGGSLCAVG---GPEALPAFIEGFKSTVPFLVFPAKALV 150
Query: 57 AFPVSYHTANGIRHLIWD 74
FP YHT G RH++WD
Sbjct: 151 GFPFVYHTLGGFRHIVWD 168
>gi|119570485|gb|EAW50100.1| hCG2040215 [Homo sapiens]
Length = 132
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 5 LSITHRGTGVALTAYA--LGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
++I H TG AL A A G++ + L + S + V +L L ++ KF L FP+ Y
Sbjct: 67 MAICHHDTGTALRAGASLFGMSALLLPGNFESYLELVKSLCLGPALIHTAKFALVFPLMY 126
Query: 63 HTANGI 68
HT NG+
Sbjct: 127 HTWNGV 132
>gi|254460410|ref|ZP_05073826.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodobacterales
bacterium HTCC2083]
gi|206676999|gb|EDZ41486.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodobacteraceae
bacterium HTCC2083]
Length = 103
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLV 101
F+ + + YHT G+RHLIWD L I GYA++G +IL L+
Sbjct: 51 FLSLWGMWYHTLAGVRHLIWDNAIGLEINTAEKMGYAVIGGSILLTLI 98
>gi|336264221|ref|XP_003346889.1| hypothetical protein SMAC_05149 [Sordaria macrospora k-hell]
gi|380090360|emb|CCC11936.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 180
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 47 PILLAG--KFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTL 104
P+ + G KF++A+P +H NG+RHL +D G + TG+ GA+I+ L L
Sbjct: 119 PVAVKGGLKFLVAWPFVFHAINGVRHLAFDVGVGFGRSTIIKTGWYFWGASIVGGLYLAF 178
Query: 105 L 105
Sbjct: 179 F 179
>gi|296532571|ref|ZP_06895277.1| succinate dehydrogenase cytochrome b558 subunit [Roseomonas
cervicalis ATCC 49957]
gi|296267096|gb|EFH13015.1| succinate dehydrogenase cytochrome b558 subunit [Roseomonas
cervicalis ATCC 49957]
Length = 148
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPV 60
ITS LSI HR TGVA + L LA L LS+ + + F +
Sbjct: 38 ITSGLSIAHRATGVAWSVGLLVLAWWLLAAAAGPGPFATVQWFLSSFLGMLMLFGMTAVA 97
Query: 61 SYHTANGIRHLIWDTGRALTIKKVYTTGYAML-GAAILTNLVLTLL 105
YHT G+RHL+WD G + Y TG A+L G +LT VLT L
Sbjct: 98 WYHTLAGLRHLMWDAGYGFDLPTTYRTGRAVLIGTGVLT--VLTWL 141
>gi|340959745|gb|EGS20926.1| succinate dehydrogenase cytochrome-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 188
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 47 PILLAG--KFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTL 104
P+ + G KF+ A+P ++HT NG++HL++D K++ + + GA+++T + L
Sbjct: 127 PVAVKGGIKFLAAWPFAFHTFNGVKHLLYDMTIGFHRKQIVKQSWYLWGASLVTGMFLAF 186
Query: 105 L 105
Sbjct: 187 F 187
>gi|408393424|gb|EKJ72688.1| hypothetical protein FPSE_07088 [Fusarium pseudograminearum CS3096]
Length = 187
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 10/79 (12%)
Query: 3 SVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAG--KFILAFPV 60
S LS+T G +A A + VGL + S+ SFV L P+ + G KF L FP
Sbjct: 90 STLSVTLYGFSIAYLAAPV----VGLHLESLSIASFVAGL----PLAVKGGLKFTLGFPF 141
Query: 61 SYHTANGIRHLIWDTGRAL 79
YH +G++HL++D G+
Sbjct: 142 VYHAISGVKHLLYDAGKGF 160
>gi|407768401|ref|ZP_11115780.1| succinate dehydrogenase cytochrome b-556 subunit [Thalassospira
xiamenensis M-5 = DSM 17429]
gi|407289114|gb|EKF14591.1| succinate dehydrogenase cytochrome b-556 subunit [Thalassospira
xiamenensis M-5 = DSM 17429]
Length = 126
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 4/44 (9%)
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
YH NG+RHL+WDTGR LT + + GAAI VLT+L
Sbjct: 80 YHACNGVRHLVWDTGRGLTNEGARKGNPIVFGAAI----VLTIL 119
>gi|144898837|emb|CAM75701.1| succinate dehydrogenase cytochrome b556 subunit [Magnetospirillum
gryphiswaldense MSR-1]
Length = 138
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Query: 3 SVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGK-FILAFPVS 61
+++SITHR TGV L A + L + F A + L GK F+ + V+
Sbjct: 33 AIMSITHRITGVGL-AIGMFALAWWLCAAASGPAEFAVAQAVFGSFL--GKLFLFGWTVA 89
Query: 62 --YHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLV 101
+H ++GIRHL+WD+G I + Y + LGA ++ ++
Sbjct: 90 LFFHLSHGIRHLLWDSGWGFEIPQAYLSAKVALGATVVLTVI 131
>gi|238650698|ref|YP_002916551.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
peacockii str. Rustic]
gi|238624796|gb|ACR47502.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
peacockii str. Rustic]
Length = 124
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 6/103 (5%)
Query: 1 ITSVLSITHRGTGVALT-AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFP 59
I+S LSI +R TGVAL A ++ + + L+ N+ + + + I L +++
Sbjct: 25 ISSTLSILYRMTGVALFFAVSILVWWLILSKYDNNYLQLAECCIIK--ICLVA---VSYA 79
Query: 60 VSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
YH NGIRHL WD G +I V T + ++ ++L ++L
Sbjct: 80 WFYHLCNGIRHLFWDIGYGFSITLVNITCWCVVVGSVLLTVLL 122
>gi|301102751|ref|XP_002900462.1| transmembrane protein, putative [Phytophthora infestans T30-4]
gi|262101725|gb|EEY59777.1| transmembrane protein, putative [Phytophthora infestans T30-4]
Length = 166
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 8/104 (7%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLT-TDINSVVSFV-DALNLSAPILLAGKFILAF 58
+T+V S+ +R + + ++A +G + +G D+ +++ D++ API K ++AF
Sbjct: 50 VTAVSSVANRFSAMGMSAAFVGGSALGFVGADVPALIYMAQDSIPFFAPI---SKALVAF 106
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKV--YTTGYAMLGAAILTNL 100
PVSYH G RH +W T + I T+ YA+ A+ L L
Sbjct: 107 PVSYHVLCGARHSLW-TYKPELINNADGPTSSYAIFAASALITL 149
>gi|322694808|gb|EFY86628.1| succinate dehydrogenase cytochrome b subunit [Metarhizium acridum
CQMa 102]
Length = 182
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 53 KFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTL 104
KF+L FP +YH NG+RHL +D G+ + A+ ++IL+ L L
Sbjct: 129 KFLLGFPFAYHFINGLRHLWFDLGKGFAKPSIKRGEMALWTSSILSGLYLAF 180
>gi|11466582|ref|NP_066472.1| succinate:cytochrome c oxidoreductase subunit 3 [Rhodomonas salina]
gi|10444169|gb|AAG17743.1|AF288090_19 succinate:cytochrome c oxidoreductase subunit 3 [Rhodomonas salina]
Length = 128
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 28/52 (53%)
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
+ L F +H NG+RH+ WD G L IK VY TG + + L VL L+
Sbjct: 77 YFLTFIFLFHMVNGLRHISWDFGLGLEIKNVYITGIIVFCISSLFVFVLILI 128
>gi|346975528|gb|EGY18980.1| succinate dehydrogenase cytochrome b560 subunit [Verticillium
dahliae VdLs.17]
Length = 184
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 47 PILLAG--KFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTL 104
P+ + G KF++A+P +H NG+RHL +D G K++ G+ + G++++ L
Sbjct: 123 PLAVKGGIKFLVAWPFMFHCINGVRHLTYDLGLGFAKKQIAQYGWIVWGSSLVAGLYTAF 182
Query: 105 L 105
L
Sbjct: 183 L 183
>gi|453084147|gb|EMF12192.1| Sdh_cyt-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 196
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 1 ITSVLSITHRGTGVALTA--YALG---LAGVGLTTDINSVVSFVDALNLSAPILLAGKFI 55
ITS+ S R TGVA++ Y G L L D++S I + KF
Sbjct: 86 ITSIPSTLTRITGVAMSGCFYLFGTLYLTAPYLGLDMSSATLAAAFGAWPVAIQMLTKFT 145
Query: 56 LAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
LA+P+ +H+ NG+R+L WD + + V TG+ + A++L L L +L
Sbjct: 146 LAWPLVFHSFNGLRYLSWDMTIGVNNRTVARTGWTAVVASLLATLGLVVL 195
>gi|407787752|ref|ZP_11134891.1| succinate dehydrogenase subunit C [Celeribacter baekdonensis B30]
gi|407199031|gb|EKE69055.1| succinate dehydrogenase subunit C [Celeribacter baekdonensis B30]
Length = 129
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAM-LGAAILTNL 100
F+ + + YH GIRHLIWD G L + G+AM +GA ILT L
Sbjct: 77 FLSVWALWYHLGGGIRHLIWDAGYCLDVDVSEKMGWAMIIGATILTVL 124
>gi|164663263|ref|XP_001732753.1| hypothetical protein MGL_0528 [Malassezia globosa CBS 7966]
gi|159106656|gb|EDP45539.1| hypothetical protein MGL_0528 [Malassezia globosa CBS 7966]
Length = 193
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 1 ITSVLSITHRGTGV----ALTAYALGL---AGVGLTTDINSVVSFVDAL-NLSAPILLAG 52
+T V SI HR TG AL AYA+G +GL ++S S VDA+ +L A ++
Sbjct: 80 LTWVSSILHRATGTGMSWALYAYAIGYLAAPHIGLGEMLSSG-SLVDAVSHLPAWAKVSV 138
Query: 53 KFILAFPVSYHTANGIRHLIWDTG 76
K LA YH NG+RHL WD G
Sbjct: 139 KAPLAAAFMYHFFNGLRHLAWDMG 162
>gi|433772474|ref|YP_007302941.1| succinate dehydrogenase, cytochrome b556 subunit [Mesorhizobium
australicum WSM2073]
gi|433664489|gb|AGB43565.1| succinate dehydrogenase, cytochrome b556 subunit [Mesorhizobium
australicum WSM2073]
Length = 138
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFIL---A 57
IT +SI HR TG AL L L V L +S +F D +N + L G+ IL +
Sbjct: 26 ITMTMSIIHRITGGALYFGTL-LVAVWLMAAASSQPAF-DWVNWAFGTWL-GRLILFGYS 82
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
+ + +H G+RHLIWDTG L +A L ++L L++
Sbjct: 83 WALMHHMLGGVRHLIWDTGAGLEKHTASKIAWATLAGSVLLTLLI 127
>gi|399991587|ref|YP_006571827.1| succinate dehydrogenase cytochrome b556 subunit [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
gi|400753227|ref|YP_006561595.1| succinate dehydrogenase cytochrome b556 subunit [Phaeobacter
gallaeciensis 2.10]
gi|398652380|gb|AFO86350.1| succinate dehydrogenase cytochrome b556 subunit [Phaeobacter
gallaeciensis 2.10]
gi|398656142|gb|AFO90108.1| succinate dehydrogenase cytochrome b556 subunit [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
Length = 127
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLA--GKFILAF 58
ITS+ SI R TG AL AL +A L + D + ++ + G +++
Sbjct: 22 ITSITSILTRITGNALIVSALLIAWWFLAAATSE-----DYFRTANAVMTSWFGDIVMSL 76
Query: 59 PV---SYHTANGIRHLIWDTGRALTIKKVYTTGY-AMLGAAILTNLVLTLL 105
V YHT G+RHLIWD G+ L ++ G+ ++G+ +LT L L ++
Sbjct: 77 SVLGLWYHTLAGVRHLIWDNGKMLDLEPAQKLGWFVIIGSVVLTVLTLVIV 127
>gi|407716323|ref|YP_006837603.1| succinate dehydrogenase cytochrome b556 subunit [Cycloclasticus sp.
P1]
gi|407256659|gb|AFT67100.1| Succinate dehydrogenase cytochrome b556 subunit [Cycloclasticus sp.
P1]
Length = 86
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 37 SFVDALNLSAPILLAGKFIL---AFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLG 93
SF+ A + G+ +L F + +H +NGIRHL+WD G V T Y +LG
Sbjct: 9 SFISAQQFMGSFI--GRLVLFGWTFALFFHLSNGIRHLVWDAGYCFEKADVEKTSYIVLG 66
Query: 94 -AAILTNLV 101
+A LT +V
Sbjct: 67 LSAFLTIVV 75
>gi|398827913|ref|ZP_10586116.1| succinate dehydrogenase, cytochrome b556 subunit [Phyllobacterium
sp. YR531]
gi|398219211|gb|EJN05708.1| succinate dehydrogenase, cytochrome b556 subunit [Phyllobacterium
sp. YR531]
Length = 132
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 2 TSVLSITHRGTGVALT----AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILA 57
T V+SI HR TG AL A L + +VS V + +LL + L
Sbjct: 24 TMVMSIVHRITGCALYFGTLLVAWWLIAAATSQQQFDIVSMVYGSWIGLLVLLGYTWALI 83
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
+H GIRHLIWDTGR L +K TT M A+++ +++LT+L
Sbjct: 84 ----HHMIGGIRHLIWDTGRGL--EKDTTT--KMAWASLIASVLLTIL 123
>gi|114571387|ref|YP_758067.1| succinate dehydrogenase, cytochrome b subunit [Maricaulis maris
MCS10]
gi|114341849|gb|ABI67129.1| succinate dehydrogenase, cytochrome b subunit [Maricaulis maris
MCS10]
Length = 130
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 6 SITHRGTGVA--LTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSYH 63
SI HR TGVA + A A+ + V L +SF+ A + G L + VSYH
Sbjct: 27 SILHRATGVANYIGAVAISVWVVLLAFGAEGSISFLFE-GWMAWVTRFGLIALTYSVSYH 85
Query: 64 TANGIRHLIWDTGRALTIK 82
NG+RHL+WD G+ K
Sbjct: 86 WLNGLRHLLWDAGKGYDPK 104
>gi|46132950|ref|XP_389188.1| hypothetical protein FG09012.1 [Gibberella zeae PH-1]
Length = 187
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 6/56 (10%)
Query: 26 VGLTTDINSVVSFVDALNLSAPILLAG--KFILAFPVSYHTANGIRHLIWDTGRAL 79
VGL + S+ SFV L P+ + G KF L FP YH +G++HL++D G+
Sbjct: 109 VGLHLESLSIASFVAGL----PLAVKGGLKFTLGFPFVYHAISGVKHLLYDAGKGF 160
>gi|163744267|ref|ZP_02151627.1| succinate dehydrogenase, cytochrome b556 subunit [Oceanibulbus
indolifex HEL-45]
gi|161381085|gb|EDQ05494.1| succinate dehydrogenase, cytochrome b556 subunit [Oceanibulbus
indolifex HEL-45]
Length = 127
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTTGY-AMLGAAILTNL 100
YHT GIRHLIWDTGR L + G A++G+ +LT L
Sbjct: 83 YHTLAGIRHLIWDTGRMLDVPTAEKLGIAALIGSVVLTVL 122
>gi|186920110|ref|YP_001874764.1| succinate:cytochrome c oxidoreductase subunit 4 [Hemiselmis
andersenii]
gi|186461056|gb|ACC78218.1| succinate:cytochrome c oxidoreductase subunit 4 [Hemiselmis
andersenii]
Length = 142
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAP-----ILLAGKFI 55
+TS +SI HR +G L+ + LA V + S + L L ++ ++
Sbjct: 34 LTSFVSIFHRISGSILSLSFIVLAFVFYLDVLFSEHYILYCLGLVLETYGYWFFISLSYL 93
Query: 56 LAFPVSYHTANGIRHLIWDTGRALTIKKVYTTG 88
L H NG+RHLIWD G L +K VY TG
Sbjct: 94 LLTFFCLHVFNGMRHLIWDLGLGLDVKNVYITG 126
>gi|402497047|ref|YP_006556307.1| succinate dehydrogenase subunit C sdhC [Wolbachia endosymbiont of
Onchocerca ochengi]
gi|398650320|emb|CCF78490.1| succinate dehydrogenase subunit C sdhC [Wolbachia endosymbiont of
Onchocerca ochengi]
Length = 125
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALN--LSAPILLAGKFILAF 58
IT++ SI HR TG+ L + L+ + + V LN LS PI +
Sbjct: 17 ITNLFSIIHRLTGILLFLLLVMLSWYFILHVYFPKLFIVKYLNVLLSTPIAKLAYVLCFI 76
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKV 84
YH+ NGIRHL+WD G L I V
Sbjct: 77 GFLYHSFNGIRHLLWDVGFNLRITDV 102
>gi|381151930|ref|ZP_09863799.1| succinate dehydrogenase, cytochrome b556 subunit [Methylomicrobium
album BG8]
gi|380883902|gb|EIC29779.1| succinate dehydrogenase, cytochrome b556 subunit [Methylomicrobium
album BG8]
Length = 130
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 6/108 (5%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGV--GLTTDINSVVSFVDALNLSAPI-LLAGKFILA 57
+T+VLSITHR TGV L+A L + + L + S V A+ S + L FI A
Sbjct: 20 LTAVLSITHRITGVLLSAGLLFVVCLLSALAAGPEAYAS-VQAVAGSGWMRFLGWAFIYA 78
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
+ +H +G+RHLIWD G+ + + L A++L L + +L
Sbjct: 79 --LFFHLCHGVRHLIWDAGQGFEAGTLNRYAWIELAASVLLTLAVFVL 124
>gi|159462552|ref|XP_001689506.1| succinate dehydrogenase subunit b560 [Chlamydomonas reinhardtii]
gi|158283494|gb|EDP09244.1| succinate dehydrogenase subunit b560 [Chlamydomonas reinhardtii]
Length = 183
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 6 SITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSYHTA 65
SIT+R TGVAL+ +G AG G+ S+ V A S I KF++++ + YH
Sbjct: 78 SITNRVTGVALS---VGFAGAGVFALRGSLDGVVAACAGSFLIGFPLKFLVSYAIIYHWL 134
Query: 66 NGIRHLIWDTGR 77
G+RH++WD +
Sbjct: 135 GGLRHIVWDVSK 146
>gi|344923091|ref|ZP_08776552.1| succinate dehydrogenase cytochrome b-556 subunit [Candidatus
Odyssella thessalonicensis L13]
Length = 75
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
F F YH ANGIRHL WD G+ + V TG+ + ILT+++ TLL
Sbjct: 23 FFSLFGFYYHLANGIRHLAWDIGQGYELHIVRITGWLV----ILTSIIATLL 70
>gi|88607062|ref|YP_505561.1| succinate dehydrogenase, cytochrome b556 subunit [Anaplasma
phagocytophilum HZ]
gi|46361034|gb|AAL17653.2| succinate dehydrogenase subunit C [Anaplasma phagocytophilum]
gi|88598125|gb|ABD43595.1| succinate dehydrogenase, cytochrome b556 subunit [Anaplasma
phagocytophilum HZ]
Length = 127
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 50/102 (49%), Gaps = 11/102 (10%)
Query: 1 ITSVLSITHRGTGV----ALTAYALGLAGVGLTTD--INSVVSFVDALNLSAPILLAGKF 54
IT+ LSITHR TGV LT + L + T+ + S++ L + I G
Sbjct: 18 ITAWLSITHRITGVLLLMGLTLFTWLLISLHWTSGQLWGLLDSWIGVLLVKVII---GGC 74
Query: 55 ILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAI 96
I A + YH NGIRHL WD G + +G+ MLG A+
Sbjct: 75 IAA--LCYHYYNGIRHLFWDCGIGFGKSEATFSGWLMLGFAV 114
>gi|330813447|ref|YP_004357686.1| succinate dehydrogenase cytochrome b-556 subunit [Candidatus
Pelagibacter sp. IMCC9063]
gi|327486542|gb|AEA80947.1| succinate dehydrogenase cytochrome b-556 subunit [Candidatus
Pelagibacter sp. IMCC9063]
Length = 65
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 50 LAGKFILA---FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
+ GKFIL + YH NG+RHL WD G IK +G +L ++ L ++L
Sbjct: 6 IVGKFILVGFTWSFCYHLLNGLRHLFWDMGYGYEIKTANFSGIFVLTSSFLLTIIL 61
>gi|159462554|ref|XP_001689507.1| succinate dehydrogenase subunit b560 [Chlamydomonas reinhardtii]
gi|158283495|gb|EDP09245.1| succinate dehydrogenase subunit b560 [Chlamydomonas reinhardtii]
Length = 203
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 6 SITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSYHTA 65
SIT+R TGVAL+ +G AG G+ S+ V A S I KF++++ + YH
Sbjct: 98 SITNRVTGVALS---VGFAGAGVFALRGSLDGVVAACAGSFLIGFPLKFLVSYAIIYHWL 154
Query: 66 NGIRHLIWDTGR 77
G+RH++WD +
Sbjct: 155 GGLRHIVWDVSK 166
>gi|68171567|ref|ZP_00544942.1| Succinate dehydrogenase, cytochrome b subunit [Ehrlichia
chaffeensis str. Sapulpa]
gi|88658394|ref|YP_507709.1| succinate dehydrogenase, cytochrome b556 subunit [Ehrlichia
chaffeensis str. Arkansas]
gi|18139860|gb|AAL60178.1|AF416764_1 succinate dehydrogenase subunit C [Ehrlichia chaffeensis]
gi|67999008|gb|EAM85684.1| Succinate dehydrogenase, cytochrome b subunit [Ehrlichia
chaffeensis str. Sapulpa]
gi|88599851|gb|ABD45320.1| succinate dehydrogenase, cytochrome b556 subunit [Ehrlichia
chaffeensis str. Arkansas]
Length = 128
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 5 LSITHRGTGVALTAYALGLA-GVGLTTDINSVVSFVDALNLSAPILLAG----KFILAFP 59
LSI HR TG+ L L L+ G L+ VV + + ++ + L FI
Sbjct: 20 LSIMHRFTGMILFLGLLVLSWGFILSFLCPQVVYRICSFFCNSYVSLYSLKLITFIWLNV 79
Query: 60 VSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
+ YH NGIRH+ WD G L+ V TTG ++ ++++ +L
Sbjct: 80 LCYHYMNGIRHIFWDLGLGLSKSAVRTTGVVVVFLCLVSSFIL 122
>gi|85090713|ref|XP_958549.1| hypothetical protein NCU07756 [Neurospora crassa OR74A]
gi|28919920|gb|EAA29313.1| hypothetical protein NCU07756 [Neurospora crassa OR74A]
gi|336473444|gb|EGO61604.1| hypothetical protein NEUTE1DRAFT_94058 [Neurospora tetrasperma FGSC
2508]
gi|350293267|gb|EGZ74352.1| cytochrome b560 subunit of succinate dehydrogenase [Neurospora
tetrasperma FGSC 2509]
Length = 180
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 53 KFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
KF++A+P +H NG+RHL +D G + + TG+ GA+I+ + L
Sbjct: 127 KFLVAWPFVFHAINGVRHLAFDLGIGFSRATIIKTGWYFWGASIVGGVYLAFF 179
>gi|451853996|gb|EMD67289.1| hypothetical protein COCSADRAFT_34123 [Cochliobolus sativus ND90Pr]
Length = 177
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 53 KFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
K A P +H NG+RHL WD G ++V TG+ ++G ++ L L
Sbjct: 124 KTFFALPFFFHCLNGVRHLAWDMGVGFKNQQVIRTGWGVVGLTAVSTLYYAFL 176
>gi|300121288|emb|CBK21668.2| unnamed protein product [Blastocystis hominis]
Length = 154
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 8 THRGTGVALTAYALGLAGVGLTTDIN-SVVSFVDALNLSAPILLAGKFILAFPVSYHTAN 66
HR TG+ L +G G+T SV + ++A+ +L +GKF+L + + YH
Sbjct: 43 CHRLTGLGLW---MGFTAAGITACCGVSVPALIEAIKFHPLVLYSGKFLLTYALGYHYVC 99
Query: 67 GIRHLIWD 74
G+RH+ ++
Sbjct: 100 GLRHIFYE 107
>gi|357386216|ref|YP_004900940.1| succinate dehydrogenase cytochrome b-556 subunit [Pelagibacterium
halotolerans B2]
gi|351594853|gb|AEQ53190.1| succinate dehydrogenase cytochrome b-556 subunit [Pelagibacterium
halotolerans B2]
Length = 126
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 10/81 (12%)
Query: 1 ITSVLSITHRGTGVAL----TAYALGLAGVGLTTD-INSVVSFVDALNLSAPILLAGKFI 55
+T LSI HR G+ L +AL L L D +++V F PI+ G F+
Sbjct: 18 LTMTLSILHRVLGIGLYLGTVLFALWLGAAALGQDQLSAVQGF-----FGHPIIQIGLFL 72
Query: 56 LAFPVSYHTANGIRHLIWDTG 76
+ + +H A G++H +WDTG
Sbjct: 73 YTWTLFHHMAGGLKHFVWDTG 93
>gi|126666300|ref|ZP_01737279.1| Succinate dehydrogenase/fumarate reductase, cytochrome b subunit
[Marinobacter sp. ELB17]
gi|126629101|gb|EAZ99719.1| Succinate dehydrogenase/fumarate reductase, cytochrome b subunit
[Marinobacter sp. ELB17]
Length = 109
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINS-VVSFVDALNLSAPILLAGKFILAFP 59
+TSVLS HR +G+ L+ A+ L G LT + + ++A SA LL FI
Sbjct: 8 LTSVLSFGHRLSGLFLSLGAVLLVGWLLTAATEAQAFTHLNAWLGSALGLLL-LFIWTLA 66
Query: 60 VSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAI 96
+ +H NGIRHL+WD + +Y +G+ ++ ++I
Sbjct: 67 LFFHLCNGIRHLLWDAVIGFELVDIYRSGWIVVFSSI 103
>gi|353328370|ref|ZP_08970697.1| succinate dehydrogenase, cytochrome b556 subunit [Wolbachia
endosymbiont wVitB of Nasonia vitripennis]
Length = 125
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALN--LSAPILLAGKFILAF 58
+TS SI HR TG+ L + L+ + + + V LN L P+ +IL F
Sbjct: 17 VTSFFSIMHRLTGILLFLLLIILSWYFILYVYSPKLIIVRCLNALLFTPVAKLA-YILCF 75
Query: 59 -PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTL 104
YH NGIRHL+WD G L I V L +AIL ++L L
Sbjct: 76 VSFMYHFLNGIRHLLWDAGLNLEIASV-------LKSAILLTIMLFL 115
>gi|342872126|gb|EGU74523.1| hypothetical protein FOXB_14968 [Fusarium oxysporum Fo5176]
Length = 187
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 13/83 (15%)
Query: 6 SITHRGTGVALTA--YALGLAG-----VGLTTDINSVVSFVDALNLSAPILLAG--KFIL 56
S +R TG L+A Y LA VGL + S+ SF L P+ + G KF L
Sbjct: 82 SAWNRITGCTLSATMYGFSLAYLAAPLVGLHLESASIASFAAGL----PLAIKGGIKFTL 137
Query: 57 AFPVSYHTANGIRHLIWDTGRAL 79
FP YH +G +HL++D G+
Sbjct: 138 GFPFVYHAISGFKHLLYDAGKGF 160
>gi|190571454|ref|YP_001975812.1| succinate dehydrogenase, cytochrome b556 subunit [Wolbachia
endosymbiont of Culex quinquefasciatus Pel]
gi|190357726|emb|CAQ55176.1| succinate dehydrogenase, cytochrome b556 subunit [Wolbachia
endosymbiont of Culex quinquefasciatus Pel]
Length = 123
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALN--LSAPILLAGKFILAF 58
+TS SI HR TG+ L + L+ + + + V LN L P+ +IL F
Sbjct: 17 VTSFFSIMHRLTGILLFLLLIILSWYFILYVYSPKLIIVRCLNALLFTPVAKLA-YILCF 75
Query: 59 -PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTL 104
YH NGIRHL+WD G L I V L +AIL ++L L
Sbjct: 76 VSFMYHFLNGIRHLLWDAGLNLEIASV-------LKSAILLTIMLFL 115
>gi|378786299|dbj|BAL63237.1| succinate: cytochrome c oxidoreductase subunit 3 (mitochondrion)
[Pyropia tenera]
Length = 127
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 2 TSVLSITHRGTGVALTAYALG----LAGVG-LTTDINSVVSFVDALNLSAPILLAGKFIL 56
+S+ SI HR +GV + +G L V L I FV+ L S L + ++++
Sbjct: 20 SSIFSIWHRISGVIMFVLIVGPILLLNQVHFLYITILPTHFFVEHL-FSPWFLTSVRWVV 78
Query: 57 AFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLV 101
+ YH +NGIRH WD+ + + +K+Y +L + N++
Sbjct: 79 STIFLYHISNGIRHFFWDSVKHVNTRKMYKDSNYLLLFLLTANII 123
>gi|367024931|ref|XP_003661750.1| hypothetical protein MYCTH_79031 [Myceliophthora thermophila ATCC
42464]
gi|347009018|gb|AEO56505.1| hypothetical protein MYCTH_79031 [Myceliophthora thermophila ATCC
42464]
Length = 188
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 47 PILLAG--KFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTL 104
P+ + G KF+ A+P ++H NG+RHL++D + + TG+ + GA+ + L L
Sbjct: 127 PLAVKGGLKFLAAWPFTFHLINGVRHLLFDMAIGFKRQTIIKTGWYIWGASFVGGLYLAF 186
Query: 105 L 105
Sbjct: 187 F 187
>gi|83943849|ref|ZP_00956306.1| succinate dehydrogenase, cytochrome b556 subunit [Sulfitobacter sp.
EE-36]
gi|83845096|gb|EAP82976.1| succinate dehydrogenase, cytochrome b556 subunit [Sulfitobacter sp.
EE-36]
Length = 127
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTTGY-AMLGAAILT 98
YHT GIRHLIWD G AL I G+ A++G+ +LT
Sbjct: 83 YHTLAGIRHLIWDNGYALDIPTAEKLGWAALIGSVVLT 120
>gi|340519346|gb|EGR49585.1| predicted protein [Trichoderma reesei QM6a]
Length = 148
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 47 PILLAG--KFILAFPVSYHTANGIRHLIWDTGRALTIKKV 84
P +L G KF LAFP ++H NGI+HL++D G K +
Sbjct: 87 PFVLQGAVKFALAFPFTFHFINGIKHLVYDLGVGFAKKDI 126
>gi|374293177|ref|YP_005040212.1| Succinate dehydrogenase, cytochrome b subunit [Azospirillum
lipoferum 4B]
gi|357425116|emb|CBS87999.1| Succinate dehydrogenase, cytochrome b subunit [Azospirillum
lipoferum 4B]
Length = 129
Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 45/106 (42%), Gaps = 22/106 (20%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF-- 58
+T+V+SITHR TGV L L L V V A A FI +F
Sbjct: 20 LTAVMSITHRITGVGLAVGTLLL-----------VWWLVAAAAGPEAFARAQGFIGSFFG 68
Query: 59 ---------PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAA 95
+ YH NG+RHL+WD G++ + +LGAA
Sbjct: 69 LLLMFGWSAALYYHLCNGVRHLVWDAGKSFELTDADRNNKVVLGAA 114
>gi|346318499|gb|EGX88102.1| succinate dehydrogenase cytochrome b560 subunit [Cordyceps
militaris CM01]
Length = 182
Score = 41.2 bits (95), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 27 GLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYT 86
G + S+V+ AL + L+ K L FP +H NGIRHL +D + T ++ T
Sbjct: 105 GFHVESQSLVAGFAALPFAVQGLV--KIGLGFPFVFHFINGIRHLSFDVLKGFTKTQIRT 162
Query: 87 TGYAMLGAAILTNLVLTL 104
A+LGA++L L L
Sbjct: 163 GERAILGASLLGTLYLAF 180
>gi|153008286|ref|YP_001369501.1| succinate dehydrogenase cytochrome b556 subunit [Ochrobactrum
anthropi ATCC 49188]
gi|404316615|ref|ZP_10964548.1| succinate dehydrogenase, cytochrome b556 subunit [Ochrobactrum
anthropi CTS-325]
gi|151560174|gb|ABS13672.1| Succinate dehydrogenase cytochrome b556 subunit [Ochrobactrum
anthropi ATCC 49188]
Length = 132
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDI-NSVVSFVDALNLSAPILLAGKFIL--- 56
IT +SI HR TG AL L LA ++ + +FV+AL S G+ IL
Sbjct: 23 ITMTMSIVHRITGGALYFGTLLLAAWLISAAVSEECFNFVNALFSS----WIGRLILFGY 78
Query: 57 AFPVSYHTANGIRHLIWDTGRAL 79
+ + +H A G+RHLIWDTG L
Sbjct: 79 TWALLHHLAGGVRHLIWDTGAGL 101
>gi|111073627|emb|CAL29489.1| SdhC; succinate dehydrogenase b-type cytochrome subunit [Wolbachia
endosymbiont of Onchocerca volvulus]
Length = 125
Score = 40.8 bits (94), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALN--LSAPILLAGKFILAF 58
IT++ SI HR TG+ L + L+ + + V LN LS PI +
Sbjct: 17 ITNLFSIIHRLTGILLFLLLVMLSWYFILHVYFPKLFIVKYLNVLLSTPIAKLAYVLCFI 76
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKV 84
YH NGIRHL+WD G L I V
Sbjct: 77 GFLYHFFNGIRHLLWDVGFNLRITDV 102
>gi|304320539|ref|YP_003854182.1| succinate dehydrogenase cytochrome B-556 subunit [Parvularcula
bermudensis HTCC2503]
gi|303299441|gb|ADM09040.1| succinate dehydrogenase cytochrome B-556 subunit [Parvularcula
bermudensis HTCC2503]
Length = 142
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 54/106 (50%), Gaps = 9/106 (8%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALN--LSAP--ILLAGKFIL 56
+T SI HR TG+AL YA + V F D + L +P IL+ F
Sbjct: 32 VTMATSILHRATGIAL--YAGSVLLVLWLLGGALTEGFYDGVTGFLGSPFGILILVGFTW 89
Query: 57 AFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAA-ILTNLV 101
A +H +NGI++LIWD+GR L + T + +L A+ +LT LV
Sbjct: 90 A--QMFHLSNGIKYLIWDSGRLLQREVAKKTAWGVLIASFVLTALV 133
>gi|400594743|gb|EJP62576.1| succinate dehydrogenase cytochrome b subunit [Beauveria bassiana
ARSEF 2860]
Length = 182
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 9/102 (8%)
Query: 10 RGTGVAL--TAYALGLAGV-----GLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
R TG L TAYA L + G + S+V+ AL + L+ K L FP +
Sbjct: 81 RITGCTLSGTAYAYFLTYLIAPLAGFHVESQSLVAGFAALPFAVQGLV--KLGLGFPFVF 138
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTL 104
H NG+RHL +D + K++ T+ +LG ++LT L L
Sbjct: 139 HFINGMRHLSYDLLKGFAKKQIRTSERTILGVSLLTTLYLAF 180
>gi|451999915|gb|EMD92377.1| hypothetical protein COCHEDRAFT_1203357 [Cochliobolus
heterostrophus C5]
Length = 177
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 53 KFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLG 93
K A P +H NG+RHL WD G ++V TG+ ++G
Sbjct: 124 KTFFALPFFFHCLNGVRHLAWDMGVGFKNQQVIRTGWGVVG 164
>gi|254465461|ref|ZP_05078872.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodobacterales
bacterium Y4I]
gi|206686369|gb|EDZ46851.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodobacterales
bacterium Y4I]
Length = 127
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPV 60
+TSV SI R TG AL AL +A L S F A L G ++ V
Sbjct: 22 LTSVTSILTRITGNALIVSALLIAWWFLAAA-TSADYFATANGLLTSWF--GDLVMTLSV 78
Query: 61 ---SYHTANGIRHLIWDTGRALTIKKVYTTGYA-MLGAAILTNL 100
YHT GIRHLIWD G L +++ G+ ++G+A+LT L
Sbjct: 79 LGLWYHTLAGIRHLIWDNGYMLELEQAEKLGWGVVIGSAVLTVL 122
>gi|254487864|ref|ZP_05101069.1| succinate dehydrogenase, cytochrome b556 subunit [Roseobacter sp.
GAI101]
gi|214044733|gb|EEB85371.1| succinate dehydrogenase, cytochrome b556 subunit [Roseobacter sp.
GAI101]
Length = 127
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 52 GKFILAFPV---SYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
G I+ F + YHT GIRHLIWD G L I+ G+A L ++L ++ L+
Sbjct: 70 GDLIMFFSLLGLWYHTLAGIRHLIWDNGYGLDIQTAEKLGWAALVGSVLLTIITALI 126
>gi|77464554|ref|YP_354058.1| succinate dehydrogenase subunit C [Rhodobacter sphaeroides 2.4.1]
gi|126463394|ref|YP_001044508.1| succinate dehydrogenase, cytochrome b subunit [Rhodobacter
sphaeroides ATCC 17029]
gi|221640465|ref|YP_002526727.1| Succinate dehydrogenase subunit C [Rhodobacter sphaeroides KD131]
gi|429207112|ref|ZP_19198371.1| Succinate dehydrogenase cytochrome b-556 subunit [Rhodobacter sp.
AKP1]
gi|77388972|gb|ABA80157.1| succinate dehydrogenase subunit C [Rhodobacter sphaeroides 2.4.1]
gi|126105058|gb|ABN77736.1| succinate dehydrogenase subunit C [Rhodobacter sphaeroides ATCC
17029]
gi|221161246|gb|ACM02226.1| Succinate dehydrogenase subunit C [Rhodobacter sphaeroides KD131]
gi|428189487|gb|EKX58040.1| Succinate dehydrogenase cytochrome b-556 subunit [Rhodobacter sp.
AKP1]
Length = 127
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
+ + YH G+RHL WDTG+ L IK G A +G +LVLTLL
Sbjct: 79 WALWYHYLAGLRHLYWDTGKGLEIKTAEKLGMACIGG----SLVLTLL 122
>gi|358392914|gb|EHK42318.1| putative succinate dehydrogenase cytochrome b subunit [Trichoderma
atroviride IMI 206040]
Length = 187
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query: 47 PILLAG--KFILAFPVSYHTANGIRHLIWDTGRALTIKKV 84
P ++ G KF LAFP ++H NGI+HL++D G K++
Sbjct: 126 PFVVKGAIKFALAFPFTFHFINGIKHLVYDLGIGFAKKQI 165
>gi|299470359|emb|CBN78408.1| SDH3, succinate dehydrogenase subunit 3 [Ectocarpus siliculosus]
Length = 176
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 6 SITHRGTGVALTAYALGLAGVGLT-TDINSVVSFVDALNLSAPILLAGKFILAFPVSYHT 64
SI +R TGVAL A G++G L D ++S + + + + LA ++FP+ YH
Sbjct: 79 SIANRVTGVALVAGLYGISGATLVGCDAAGLMSALGSSGVGPAVKLA----VSFPLVYHY 134
Query: 65 ANGIRHLIWD-TGRALTIKKVYTTGYAMLG 93
+RH +WD L V T YA+LG
Sbjct: 135 LGAVRHTVWDYMPETLQTAGVAKTSYALLG 164
>gi|371572243|gb|AEX37503.1| SdhC (mitochondrion) [Gracilariopsis lemaneiformis]
Length = 123
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 2 TSVLSITHRGTGVALTA-YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPV 60
+S+ SI HR +G+ LT L L I + ++ L + + +FI F +
Sbjct: 18 SSLFSIWHRISGLFLTFLMVFFLISSQLLLFITNSKDILNGLIMQLEVSFVFQFIYIFNI 77
Query: 61 S---YHTANGIRHLIWDTGRALTIKKVY 85
S YH NG +H+IWD G + K ++
Sbjct: 78 SIFFYHIINGFKHIIWDLGFFINQKFLF 105
>gi|322703195|gb|EFY94808.1| succinate dehydrogenase cytochrome b560 subunit [Metarhizium
anisopliae ARSEF 23]
Length = 180
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 53 KFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTL 104
KF L FP +YH NG+RHL +D G+ + + ++IL+ L L
Sbjct: 127 KFFLGFPFAYHFINGLRHLWFDLGKGFAKPSIKRGEMVLWTSSILSGLYLAF 178
>gi|396497543|ref|XP_003845003.1| similar to succinate dehydrogenase cytochrome b560 subunit
[Leptosphaeria maculans JN3]
gi|312221584|emb|CBY01524.1| similar to succinate dehydrogenase cytochrome b560 subunit
[Leptosphaeria maculans JN3]
Length = 174
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%)
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
YH+ NG+RHL WD G V TG+ ++G ++T L T L
Sbjct: 130 YHSLNGVRHLFWDAGIGFKNTTVARTGWGVVGLTVVTGLYYTFL 173
>gi|300175942|emb|CBK21938.2| Succinate dehydrogenase cytochrome b560 (SDHC) [Blastocystis
hominis]
Length = 152
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 8 THRGTGVALTAYALGLAGVGLTTDIN-SVVSFVDALNLSAPILLAGKFILAFPVSYHTAN 66
HR TG+ L +G G+T SV + ++A+ IL GKF L + + YH
Sbjct: 43 CHRLTGLGLW---MGFTAAGITACCGVSVPALIEAIKFHPLILYGGKFFLTYALGYHYVC 99
Query: 67 GIRHLIWD 74
G+RH+ ++
Sbjct: 100 GLRHIYYE 107
>gi|337265580|ref|YP_004609635.1| succinate dehydrogenase, cytochrome b556 subunit [Mesorhizobium
opportunistum WSM2075]
gi|336025890|gb|AEH85541.1| succinate dehydrogenase, cytochrome b556 subunit [Mesorhizobium
opportunistum WSM2075]
Length = 139
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFIL---A 57
IT +SI HR TG AL L L + L +S +F D +N + L G+ IL
Sbjct: 28 ITMTMSIIHRITGGALYFGTL-LVAIWLMAAASSQGAF-DWVNWAFGTWL-GRLILFGYT 84
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
+ + +H G+RHL+WDTG L +A L +IL L++
Sbjct: 85 WALMHHMLGGVRHLVWDTGAGLEKDTASKIAWATLAGSILLTLLI 129
>gi|389806565|ref|ZP_10203612.1| succinate dehydrogenase membrane anchor subunit [Rhodanobacter
thiooxydans LCS2]
gi|388445217|gb|EIM01297.1| succinate dehydrogenase membrane anchor subunit [Rhodanobacter
thiooxydans LCS2]
Length = 110
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 13/102 (12%)
Query: 4 VLSITHRGTGVALTAYALG--LAGVGLTTDINSVVSFVD-ALNLSAP---ILLAGKFILA 57
V SI HR TG+AL A+G L G+ + +FV + +P ILL G +
Sbjct: 2 VSSILHRATGIAL---AIGTVLVVWGILALASGEAAFVQFRTCIGSPLGLILLLG---WS 55
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKK-VYTTGYAMLGAAILT 98
+ +SYH NGIRHL+ DTG I + V ++ +++G+ +LT
Sbjct: 56 WALSYHLCNGIRHLVQDTGAGYAIPQFVRSSWLSVIGSVVLT 97
>gi|83944805|ref|ZP_00957171.1| succinate dehydrogenase, cytochrome b556 subunit [Oceanicaulis sp.
HTCC2633]
gi|83851587|gb|EAP89442.1| succinate dehydrogenase, cytochrome b556 subunit [Oceanicaulis sp.
HTCC2633]
Length = 134
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
YH NG+RHL+WD G+ K T A++ A+IL + + LL
Sbjct: 86 YHLINGVRHLVWDAGKGFEPKFANTASMAIIIASILVTVAIWLL 129
>gi|319780753|ref|YP_004140229.1| succinate dehydrogenase cytochrome b556 subunit [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|317166641|gb|ADV10179.1| succinate dehydrogenase, cytochrome b556 subunit [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 139
Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFIL---A 57
IT +SI HR TG AL L L + L +S +F D N + L G+ IL
Sbjct: 28 ITMTMSIIHRITGGALYFGTL-LVALWLMAAASSQATF-DWANWAFGTWL-GRIILFGYT 84
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
+ + +H G+RHLIWDTG L +A L +IL L++
Sbjct: 85 WALMHHMLGGVRHLIWDTGAGLEKHTASKIAWATLAGSILLTLLI 129
>gi|389780795|ref|ZP_10194328.1| succinate dehydrogenase membrane anchor subunit [Rhodanobacter
spathiphylli B39]
gi|388435939|gb|EIL92827.1| succinate dehydrogenase membrane anchor subunit [Rhodanobacter
spathiphylli B39]
Length = 131
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 9/101 (8%)
Query: 6 SITHRGTGVALTAYAL----GLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVS 61
SITHR TG+AL +L GL + L T S F L +P+ + ++ +
Sbjct: 24 SITHRATGIALAVGSLLVVCGL--IHLATGEESFNHFRGVLG--SPLGMILMLGWSWSLF 79
Query: 62 YHTANGIRHLIWDTGRALTIKK-VYTTGYAMLGAAILTNLV 101
YH NGIRHL+ D G +I + V ++ +++G+ +LT +V
Sbjct: 80 YHLCNGIRHLLQDAGLGYSIPQFVRSSWLSVIGSIVLTVVV 120
>gi|126725053|ref|ZP_01740896.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodobacterales
bacterium HTCC2150]
gi|126706217|gb|EBA05307.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodobacteraceae
bacterium HTCC2150]
Length = 139
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTTGYAML-GAAILTNLVLTLL 105
YH G+RHL WDTGR IK+ G ++ G+ ILT L L L+
Sbjct: 95 YHFCAGLRHLYWDTGRGFEIKQAERLGIMVIAGSFILTVLTLILI 139
>gi|151946274|gb|EDN64505.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190408347|gb|EDV11612.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
gi|207342306|gb|EDZ70103.1| YMR118Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259148692|emb|CAY81937.1| EC1118_1M3_2916p [Saccharomyces cerevisiae EC1118]
gi|323303544|gb|EGA57336.1| YMR118C-like protein [Saccharomyces cerevisiae FostersB]
gi|323307750|gb|EGA61013.1| YMR118C-like protein [Saccharomyces cerevisiae FostersO]
gi|323336310|gb|EGA77581.1| YMR118C-like protein [Saccharomyces cerevisiae Vin13]
gi|323347196|gb|EGA81471.1| YMR118C-like protein [Saccharomyces cerevisiae Lalvin QA23]
gi|365763839|gb|EHN05365.1| YMR118C-like protein [Saccharomyces cerevisiae x Saccharomyces
kudriavzevii VIN7]
Length = 196
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 5 LSITHRGTGV--ALTAYALGLAGVGLTTDINSVVSFVD-----ALNLSAPILLAGKFILA 57
LS HR +GV AL YA + +G+TT + +F D + K A
Sbjct: 90 LSSLHRISGVLLALGFYAFTIT-LGVTTIMGMDTTFQDLNKWYHEKMPKWSQWVAKGSAA 148
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTG 88
+ ++H NGIRHLIWD G LT + V TG
Sbjct: 149 YLFAFHFGNGIRHLIWDMGYELTNRGVIKTG 179
>gi|348677185|gb|EGZ17002.1| hypothetical protein PHYSODRAFT_285862 [Phytophthora sojae]
Length = 168
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLT-TDINSVVSFV-DALNLSAPILLAGKFILAF 58
+T++ SI +R + V ++ +G + +G D+ +++ D++ L AP+ K ++AF
Sbjct: 50 VTAISSIANRFSAVGMSCAFVGGSALGFVGADVPALIHLAQDSIPLFAPV---SKALVAF 106
Query: 59 PVSYHTANGIRHLIW 73
PVSYH RH +W
Sbjct: 107 PVSYHLLCAARHSLW 121
>gi|256269648|gb|EEU04929.1| YMR118C-like protein [Saccharomyces cerevisiae JAY291]
Length = 196
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 5 LSITHRGTGV--ALTAYALGLAGVGLTTDINSVVSFVD-----ALNLSAPILLAGKFILA 57
LS HR +GV AL YA + +G+TT + +F D + K A
Sbjct: 90 LSSLHRISGVLLALGFYAFTIT-LGVTTIMGMDTTFQDLNKWYHEKMPKWSQWVAKGSAA 148
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTG 88
+ ++H NGIRHLIWD G LT + V TG
Sbjct: 149 YLFAFHFGNGIRHLIWDMGYELTNRGVIKTG 179
>gi|323353090|gb|EGA85390.1| YMR118C-like protein [Saccharomyces cerevisiae VL3]
Length = 196
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 5 LSITHRGTGV--ALTAYALGLAGVGLTTDINSVVSFVD-----ALNLSAPILLAGKFILA 57
LS HR +GV AL YA + +G+TT + +F D + K A
Sbjct: 90 LSSLHRISGVLLALGFYAFTIT-LGVTTIMGMDTTFQDLNKWYHEKMPKWSQWVAKGSAA 148
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTG 88
+ ++H NGIRHLIWD G LT + V TG
Sbjct: 149 YLFAFHFGNGIRHLIWDMGYELTNRGVIKTG 179
>gi|6323765|ref|NP_013836.1| protein SHH3 [Saccharomyces cerevisiae S288c]
gi|2493413|sp|Q04487.1|YM07_YEAST RecName: Full=Putative succinate dehydrogenase [ubiquinone]
cytochrome b subunit, mitochondrial; Flags: Precursor
gi|817878|emb|CAA89756.1| unknown [Saccharomyces cerevisiae]
gi|45269828|gb|AAS56294.1| YMR118C [Saccharomyces cerevisiae]
gi|285814120|tpg|DAA10015.1| TPA: protein SHH3 [Saccharomyces cerevisiae S288c]
gi|349580401|dbj|GAA25561.1| K7_Ymr118cp [Saccharomyces cerevisiae Kyokai no. 7]
gi|392297280|gb|EIW08380.1| hypothetical protein CENPK1137D_150 [Saccharomyces cerevisiae
CEN.PK113-7D]
Length = 196
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 5 LSITHRGTGV--ALTAYALGLAGVGLTTDINSVVSFVD-----ALNLSAPILLAGKFILA 57
LS HR +GV AL YA + +G+TT + +F D + K A
Sbjct: 90 LSSLHRISGVLLALGFYAFTIT-LGVTTIMGMDTTFQDLNKWYHEKMPKWSQWVAKGSAA 148
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTG 88
+ ++H NGIRHLIWD G LT + V TG
Sbjct: 149 YLFAFHFGNGIRHLIWDMGYELTNRGVIKTG 179
>gi|323332076|gb|EGA73487.1| YMR118C-like protein [Saccharomyces cerevisiae AWRI796]
Length = 228
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 5 LSITHRGTGV--ALTAYALGLAGVGLTTDINSVVSFVDALN------LSAPILLAGKFIL 56
LS HR +GV AL YA + +G+TT + +F D LN + K
Sbjct: 122 LSSLHRISGVLLALGFYAFTIT-LGVTTIMGMDTTFQD-LNKWYHEKMPKWSQWVAKGSA 179
Query: 57 AFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAIL 97
A+ ++H NGIRHLIWD G LT + V TG +L ++
Sbjct: 180 AYLFAFHFGNGIRHLIWDMGYELTNRGVIKTGSIVLAGTLV 220
>gi|332559447|ref|ZP_08413769.1| succinate dehydrogenase cytochrome b556 subunit [Rhodobacter
sphaeroides WS8N]
gi|332277159|gb|EGJ22474.1| succinate dehydrogenase cytochrome b556 subunit [Rhodobacter
sphaeroides WS8N]
Length = 127
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLV 101
+ + YH G+RHL WDTG+ L IK G A +G +++ L+
Sbjct: 79 WALWYHYLAGLRHLYWDTGKGLEIKTAEKLGMACIGGSLVPTLL 122
>gi|58584743|ref|YP_198316.1| succinate dehydrogenase subunit C sdhC [Wolbachia endosymbiont
strain TRS of Brugia malayi]
gi|58419059|gb|AAW71074.1| Succinate dehydrogenase subunit C sdhC [Wolbachia endosymbiont
strain TRS of Brugia malayi]
Length = 125
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKF-ILAF- 58
+T+ SI HR TG+ L + L+ + V LN+ +A IL F
Sbjct: 17 VTNFFSIMHRLTGILLFLLLVMLSWYFTLHVYFPELFIVKCLNVLLSTFIAKLVCILCFI 76
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKV 84
SYH NGIRHL+WD G L I V
Sbjct: 77 SFSYHFLNGIRHLLWDAGFNLEITDV 102
>gi|444322414|ref|XP_004181848.1| hypothetical protein TBLA_0H00360 [Tetrapisispora blattae CBS 6284]
gi|387514894|emb|CCH62329.1| hypothetical protein TBLA_0H00360 [Tetrapisispora blattae CBS 6284]
Length = 179
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Query: 25 GVGLTTDINS--VVSFVDA-LNLSAPILLAGKFILAFPVSYHTANGIRHLIWDTGRALTI 81
G L D+NS + F D N I + G F A+ ++ +RHL WD G LT+
Sbjct: 101 GALLGYDVNSKKIKEFYDKHFN---NIFVKGAF--AYLFAFQLFGTLRHLTWDMGYQLTL 155
Query: 82 KKVYTTGYAMLGAAIL 97
K VY TGY+++ L
Sbjct: 156 KGVYRTGYSVIACGTL 171
>gi|329114746|ref|ZP_08243503.1| Succinate dehydrogenase cytochrome b556 subunit [Acetobacter
pomorum DM001]
gi|326695877|gb|EGE47561.1| Succinate dehydrogenase cytochrome b556 subunit [Acetobacter
pomorum DM001]
Length = 157
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Query: 1 ITSVLSITHRGTGVALTAYA-LGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILA-- 57
++ VLSI +R TGV TA A LG+ +G +F A ++ L G+ +L
Sbjct: 34 LSMVLSIMNRITGVIATAGATLGVFWLGAAA--KGPKAFATARKVTGNPL--GQLVLVGW 89
Query: 58 -FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLG 93
V YHT GIRHLIWD+G K+V G +G
Sbjct: 90 LASVIYHTVGGIRHLIWDSGYRYDKKEVNKDGPVAVG 126
>gi|378786328|dbj|BAL63256.1| succinate:cytochrome c oxidoreductase subunit 3 (mitochondrion)
[Porphyra kuniedae]
Length = 129
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 2 TSVLSITHRGTGVAL------TAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFI 55
+S+ SI HR +G + + L + T + + V F AL + + + +
Sbjct: 20 SSIFSIWHRISGFVMFILISSPIFLLNCSYFSYTPNFLASVVFNYAL--YTWLFDSFRLV 77
Query: 56 LAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAIL 97
++ YH +NG RH +WD+ R + K++YT +L +L
Sbjct: 78 ISAIFLYHISNGTRHFLWDSVRHVNTKEIYTDSKFLLVCLLL 119
>gi|295841399|dbj|BAJ07113.1| succinate dehydrogenase subunit C [Corynespora cassiicola]
Length = 177
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 53 KFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
K +A P +H+ NG+RHL WD G K V TG++++ + L +L
Sbjct: 124 KISIAMPFFFHSLNGLRHLSWDIGLGFKNKAVIQTGWSVIALSAAATLYYSLF 176
>gi|13473609|ref|NP_105177.1| succinate dehydrogenase membrane anchor subunit [Mesorhizobium loti
MAFF303099]
gi|14024359|dbj|BAB50963.1| succinate dehydrogenase membrane anchor subunit [Mesorhizobium loti
MAFF303099]
Length = 139
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFIL---A 57
IT +SI HR TG AL L L + L +S +F D +N + L G+ IL
Sbjct: 28 ITMTMSIIHRITGGALYFGTL-LVAIWLMAAASSQATF-DWVNWAFGTWL-GRLILFGYT 84
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
+ + +H G+RHL+WDTG L +A L ++L L++
Sbjct: 85 WALMHHMLGGVRHLVWDTGAGLEKHTASKIAWATLVGSVLLTLLI 129
>gi|307103975|gb|EFN52231.1| hypothetical protein CHLNCDRAFT_54553 [Chlorella variabilis]
Length = 476
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 3 SVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPIL-LAGKFILAFPVS 61
++ SIT+R TG L+ A + LT D+ + ++ A +AP+L K +AFP+
Sbjct: 365 AISSITNRATGCMLSVGTGAAAYIALTGDLGAAIA---AFKDAAPLLVFPAKAAVAFPLV 421
Query: 62 YHTANGIRHLIWDTGR 77
YH G+RHL WD +
Sbjct: 422 YHYLAGVRHLYWDHAK 437
>gi|295841401|dbj|BAJ07114.1| succinate dehydrogenase subunit C [Corynespora cassiicola]
Length = 177
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 53 KFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
K +A P +H+ NG+RHL WD G K V TG++++ + L +L
Sbjct: 124 KISIAMPFFFHSLNGLRHLSWDIGLGFKNKAVIQTGWSVIALSAAATLYYSLF 176
>gi|260431521|ref|ZP_05785492.1| succinate dehydrogenase, cytochrome b556 subunit [Silicibacter
lacuscaerulensis ITI-1157]
gi|260415349|gb|EEX08608.1| succinate dehydrogenase, cytochrome b556 subunit [Silicibacter
lacuscaerulensis ITI-1157]
Length = 128
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 50 LAGKFILA---FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYA-MLGAAILT 98
L G ++A + + YHT GIRHLIWD+ L + Y G+A ++G+ +LT
Sbjct: 68 LLGDLVMALSLWGLWYHTLAGIRHLIWDSAVGLDLPTAYKLGWAVVIGSVVLT 120
>gi|444921146|ref|ZP_21240984.1| Succinate dehydrogenase cytochrome b556 subunit [Wohlfahrtiimonas
chitiniclastica SH04]
gi|444507882|gb|ELV08056.1| Succinate dehydrogenase cytochrome b556 subunit [Wohlfahrtiimonas
chitiniclastica SH04]
Length = 129
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Query: 2 TSVLSITHRGTGVALTAYALGLAG--VGLTTDINSVVSFVDALNLSA--PILLAGKFILA 57
TSV+S HR TG+A L + + + ++N + L A P+L G
Sbjct: 22 TSVMSFLHRLTGIASLVVVLVICAWIIAIPFNLNLAIGIQSLLTHYAFFPLLAIG----V 77
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
YH NGIRHL WD G ++ ++ +G ++ A+++ + +
Sbjct: 78 ASTVYHFCNGIRHLFWDAGIGISNEEAQKSGRWVIIASVIVTIAI 122
>gi|84515883|ref|ZP_01003244.1| succinate dehydrogenase, cytochrome b556 subunit [Loktanella
vestfoldensis SKA53]
gi|84510325|gb|EAQ06781.1| succinate dehydrogenase, cytochrome b556 subunit [Loktanella
vestfoldensis SKA53]
Length = 127
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 52 GKFIL---AFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLV 101
GK ++ + + YH+ G+RHL+WD+GR L + G AM+ +++ ++
Sbjct: 70 GKLVMLGSIWALWYHSLGGLRHLVWDSGRMLDVASSERAGQAMVALSVVLTII 122
>gi|56416566|ref|YP_153640.1| succinate dehydrogenase cytochrome b556 subunit [Anaplasma
marginale str. St. Maries]
gi|222474934|ref|YP_002563349.1| succinate dehydrogenase cytochrome b556 subunit (sdhC) [Anaplasma
marginale str. Florida]
gi|56387798|gb|AAV86385.1| succinate dehydrogenase cytochrome b556 subunit [Anaplasma
marginale str. St. Maries]
gi|222419070|gb|ACM49093.1| succinate dehydrogenase cytochrome b556 subunit (sdhC) [Anaplasma
marginale str. Florida]
Length = 127
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFV-DALNLSAPILLAGKFILA 57
+ ++LSITHR +G+ L L V L + + F+ + L LL+ +A
Sbjct: 19 VAALLSITHRASGLFLFFGLSVLSWLFVLLRCAPDCIAPFLANPLGFFLVKLLSFSCCVA 78
Query: 58 FPVSYHTANGIRHLIWDTG 76
F YH NG+RHL+WD G
Sbjct: 79 F--CYHYFNGVRHLLWDCG 95
>gi|407696512|ref|YP_006821300.1| succinate dehydrogenase, cytochrome b556 subunit [Alcanivorax
dieselolei B5]
gi|407253850|gb|AFT70957.1| Succinate dehydrogenase, cytochrome b556 subunit [Alcanivorax
dieselolei B5]
Length = 124
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNL-SAPILLAGKFILAFP 59
+T++ SITHR TGVA+ AL + L + S SF D L +P+ + + P
Sbjct: 18 VTAIASITHRITGVAIFV-ALPILLWMLDRSVASPESFADLKQLLDSPLAKLVVWAILTP 76
Query: 60 VSYHTANGIRHLIWDTGRALTIK 82
+ YH GIRHL D G T++
Sbjct: 77 ILYHLVAGIRHLFMDAGIGETLE 99
>gi|373450983|ref|ZP_09542923.1| Succinate dehydrogenase cytochrome b556 subunit [Wolbachia
pipientis wAlbB]
gi|371931830|emb|CCE77941.1| Succinate dehydrogenase cytochrome b556 subunit [Wolbachia
pipientis wAlbB]
Length = 125
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALN--LSAPILLAGKFILAF 58
+TS SI HR TG+ L + L+ + + + V N L P+ +IL F
Sbjct: 17 VTSFFSIMHRLTGILLFLLLIILSWYFILYVYSPKLIIVRCSNALLFTPVAKLA-YILCF 75
Query: 59 -PVSYHTANGIRHLIWDTGRALTIKKVYTTG 88
YH NGIRHL+WD G L I V+ +
Sbjct: 76 VSFVYHFLNGIRHLLWDAGLNLEIASVFKSA 106
>gi|378786311|dbj|BAL63245.1| succinate: cytochrome c oxidoreductase subunit 3 (mitochondrion)
[Porphyra tenuipedalis]
Length = 129
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 2 TSVLSITHRGTGVAL----TAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILA 57
+S+ SI HR +GV + ++ L V ++ F+ LS IL++ + ++
Sbjct: 20 SSIFSIWHRISGVVMFILISSPLFILNQVYFLYTPIFLLEFLVNYILSNWILVSFRLLIF 79
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKV 84
YH +NG+RH +WD R + KK+
Sbjct: 80 TVFLYHISNGLRHFLWDLVRHVNTKKI 106
>gi|310800693|gb|EFQ35586.1| succinate dehydrogenase cytochrome b subunit [Glomerella
graminicola M1.001]
Length = 188
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 26 VGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVY 85
+G + S+V+ AL L+A L KF++A+P ++H NGIRHL +D + T ++
Sbjct: 110 LGWHVESQSLVAAFGALPLAAKGGL--KFLVAWPFTFHFFNGIRHLTYDLVKGFTKPEII 167
Query: 86 TTGYAMLGAAILT 98
G+ + ++++
Sbjct: 168 RWGWIIWSTSLVS 180
>gi|83953490|ref|ZP_00962212.1| succinate dehydrogenase, cytochrome b556 subunit [Sulfitobacter sp.
NAS-14.1]
gi|83842458|gb|EAP81626.1| succinate dehydrogenase, cytochrome b556 subunit [Sulfitobacter sp.
NAS-14.1]
Length = 127
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 19/31 (61%)
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTTGYAML 92
YHT GIRHLIWD G AL I G+A L
Sbjct: 83 YHTLAGIRHLIWDNGYALDIPTAEKLGWAAL 113
>gi|197103676|ref|YP_002129053.1| succinate dehydrogenase cytochrome b-556 subunit [Phenylobacterium
zucineum HLK1]
gi|196477096|gb|ACG76624.1| succinate dehydrogenase cytochrome b-556 subunit [Phenylobacterium
zucineum HLK1]
Length = 129
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 49/114 (42%), Gaps = 18/114 (15%)
Query: 1 ITSVLSITHRGTGVAL-------TAYALGLAGVGLTTDINSVV--SFVDALNLSAPILLA 51
+T SI HR TGVAL A+AL LAG T V SF+ L L
Sbjct: 18 LTMATSILHRITGVALYGGALIAAAWALSLAGGPETYAAFKGVMGSFLGKLAL------- 70
Query: 52 GKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
F L YH NG+RHL WD G +K + ++ A+ L + ++
Sbjct: 71 --FGLTLAGFYHLGNGVRHLTWDLGHGFDLKSANASAVGVIAFAVAATLAVWVI 122
>gi|90021755|ref|YP_527582.1| succinate dehydrogenase subunit C [Saccharophagus degradans 2-40]
gi|89951355|gb|ABD81370.1| succinate dehydrogenase subunit C [Saccharophagus degradans 2-40]
Length = 124
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALN-LSAPILLAGKFILAFP 59
IT+++SITHR TGV L A LGL + L + S SF + L+ P + +
Sbjct: 18 ITALVSITHRVTGVVLLAGILGLIWM-LDLSLASEESFNQLKDCLAQPFVKIALIAVLAA 76
Query: 60 VSYHTANGIRHLIWDTG 76
++YH G+RHLI D G
Sbjct: 77 LAYHLVAGVRHLIMDLG 93
>gi|452003849|gb|EMD96306.1| hypothetical protein COCHEDRAFT_1191388 [Cochliobolus
heterostrophus C5]
Length = 172
Score = 39.3 bits (90), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 9/112 (8%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGV-----GLTTDINSVVSFVDALNLSAPILLAGK 53
I SV S R TG+ L+ Y G+A + G D S+V+ V A + I + K
Sbjct: 62 INSVTSTLQRITGLTLSGCLYLFGIAYLVAPYTGWHVDTTSIVAAVAAWPTA--IKMGVK 119
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
LAF +H NG+RHL WD G + V TG+ ++G ++ +L T +
Sbjct: 120 AFLAFKFFFHGFNGLRHLTWDVGIGFKNQNVIRTGWTVIGMTVVVSLYCTFM 171
>gi|358388345|gb|EHK25938.1| hypothetical protein TRIVIDRAFT_86048 [Trichoderma virens Gv29-8]
Length = 187
Score = 39.3 bits (90), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Query: 47 PILLAG--KFILAFPVSYHTANGIRHLIWDTG 76
P ++ G KF LAFP ++H NGI+HL++D G
Sbjct: 126 PFVVKGAIKFALAFPFTFHFINGIKHLVYDLG 157
>gi|254994783|ref|ZP_05276973.1| succinate dehydrogenase cytochrome b556 subunit (sdhC) [Anaplasma
marginale str. Mississippi]
gi|255002908|ref|ZP_05277872.1| succinate dehydrogenase cytochrome b556 subunit (sdhC) [Anaplasma
marginale str. Puerto Rico]
gi|255004036|ref|ZP_05278837.1| succinate dehydrogenase cytochrome b556 subunit (sdhC) [Anaplasma
marginale str. Virginia]
Length = 120
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGVGLTTDINSVVSFV-DALNLSAPILLAGKFILA 57
+ ++LSITHR +G+ L L V L + + F+ + L LL+ +A
Sbjct: 12 VAALLSITHRASGLFLFFGLSVLSWLFVLLRCAPDCIAPFLANPLGFFLVKLLSFSCCVA 71
Query: 58 FPVSYHTANGIRHLIWDTG 76
F YH NG+RHL+WD G
Sbjct: 72 F--CYHYFNGVRHLLWDCG 88
>gi|386399552|ref|ZP_10084330.1| succinate dehydrogenase, cytochrome b556 subunit [Bradyrhizobium
sp. WSM1253]
gi|385740178|gb|EIG60374.1| succinate dehydrogenase, cytochrome b556 subunit [Bradyrhizobium
sp. WSM1253]
Length = 132
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 53/107 (49%), Gaps = 11/107 (10%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDIN-SVVSFVDALNLSAPILLAGKFI---L 56
+T LSI HR TG+AL A L LA + T + S V A S + G+ I
Sbjct: 20 LTMALSIVHRATGIALYAGTLLLAWWLIATASGPAAYSHVQAFTGS----IIGRLIVFGF 75
Query: 57 AFPVSYHTANGIRHLIWDTGRALTI--KKVYTTGYAMLGAAILTNLV 101
+ + +H +GIRH +WD G ++ T G A++G +LT LV
Sbjct: 76 TWALMHHMLSGIRHFVWDLGYGFKANEREALTWG-ALIGGIVLTVLV 121
>gi|378786305|dbj|BAL63241.1| succinate: cytochrome c oxidoreductase subunit 3 (mitochondrion)
[Porphyra kinositae]
Length = 129
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 2 TSVLSITHRGTGVALTAYALGLAGVGLTTDINSVV-------SFVDALNLSAPILLAGKF 54
+S+ SI HR +GV + + L + + L ++ + FV+ L L + +
Sbjct: 20 SSIFSIWHRISGVIM--FVLIVGPILLLNQVHFIYITILPIHFFVEHLFFPW-FLTSVRL 76
Query: 55 ILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLV 101
+++ YH +NGIRH WD+ + + +K++ +L ++ N++
Sbjct: 77 VVSTIFLYHISNGIRHFFWDSVKHVNTRKMHKDSNYLLLFVLIANII 123
>gi|352089958|ref|ZP_08954195.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodanobacter sp.
2APBS1]
gi|389796986|ref|ZP_10200030.1| succinate dehydrogenase membrane anchor subunit [Rhodanobacter sp.
116-2]
gi|351678494|gb|EHA61640.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodanobacter sp.
2APBS1]
gi|388447819|gb|EIM03813.1| succinate dehydrogenase membrane anchor subunit [Rhodanobacter sp.
116-2]
Length = 131
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 9/106 (8%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLS-API---LLAGKFIL 56
I V SI HR TG+AL L L G+ + +F + +PI LL G
Sbjct: 19 IQMVTSILHRATGIALAVGTL-LVVWGILALASGEAAFEQFKTCTGSPIGLILLVG---W 74
Query: 57 AFPVSYHTANGIRHLIWDTGRALTIKK-VYTTGYAMLGAAILTNLV 101
+ + YH NGIRHL+ DTG I + V ++ +++G+ +LT L+
Sbjct: 75 TWALGYHLCNGIRHLVQDTGAGYKIPQFVRSSWLSVIGSFVLTVLI 120
>gi|258541135|ref|YP_003186568.1| succinate dehydrogenase cytochrome b subunit [Acetobacter
pasteurianus IFO 3283-01]
gi|384041056|ref|YP_005479800.1| succinate dehydrogenase cytochrome b subunit [Acetobacter
pasteurianus IFO 3283-12]
gi|384049571|ref|YP_005476634.1| succinate dehydrogenase cytochrome b subunit [Acetobacter
pasteurianus IFO 3283-03]
gi|384052681|ref|YP_005485775.1| succinate dehydrogenase cytochrome b subunit [Acetobacter
pasteurianus IFO 3283-07]
gi|384055913|ref|YP_005488580.1| succinate dehydrogenase cytochrome b subunit [Acetobacter
pasteurianus IFO 3283-22]
gi|384058554|ref|YP_005497682.1| succinate dehydrogenase cytochrome b subunit [Acetobacter
pasteurianus IFO 3283-26]
gi|384061848|ref|YP_005482490.1| succinate dehydrogenase cytochrome b subunit [Acetobacter
pasteurianus IFO 3283-32]
gi|384117924|ref|YP_005500548.1| succinate dehydrogenase cytochrome b subunit [Acetobacter
pasteurianus IFO 3283-01-42C]
gi|256632213|dbj|BAH98188.1| succinate dehydrogenase cytochrome b subunit [Acetobacter
pasteurianus IFO 3283-01]
gi|256635270|dbj|BAI01239.1| succinate dehydrogenase cytochrome b subunit [Acetobacter
pasteurianus IFO 3283-03]
gi|256638325|dbj|BAI04287.1| succinate dehydrogenase cytochrome b subunit [Acetobacter
pasteurianus IFO 3283-07]
gi|256641379|dbj|BAI07334.1| succinate dehydrogenase cytochrome b subunit [Acetobacter
pasteurianus IFO 3283-22]
gi|256644434|dbj|BAI10382.1| succinate dehydrogenase cytochrome b subunit [Acetobacter
pasteurianus IFO 3283-26]
gi|256647489|dbj|BAI13430.1| succinate dehydrogenase cytochrome b subunit [Acetobacter
pasteurianus IFO 3283-32]
gi|256650542|dbj|BAI16476.1| succinate dehydrogenase cytochrome b subunit [Acetobacter
pasteurianus IFO 3283-01-42C]
gi|256653533|dbj|BAI19460.1| succinate dehydrogenase cytochrome b subunit [Acetobacter
pasteurianus IFO 3283-12]
Length = 157
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Query: 1 ITSVLSITHRGTGVALTAYA-LGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILA-- 57
++ VLSI +R TGV TA A LG+ +G +F A ++ L G+ +L
Sbjct: 34 LSMVLSIMNRITGVIATAGATLGVFWLGAAA--KGPKAFATARKVTGNPL--GQLVLLGW 89
Query: 58 -FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLG 93
V YHT GIRHLIWD+G K+V G +G
Sbjct: 90 LASVIYHTVGGIRHLIWDSGYRYDKKEVNKDGPVAVG 126
>gi|408394902|gb|EKJ74096.1| hypothetical protein FPSE_05750 [Fusarium pseudograminearum CS3096]
Length = 188
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 26 VGLTTDINSVVSFVDALNLSAPILLAGKF-ILAFPVSYHTANGIRHLIWDTG---RALTI 81
+GL D ++VS AL A + KF +L FP SYH NGIRHL++D G + +
Sbjct: 109 LGLGFDSAALVSAFGALPFVAKTAI--KFGLLGFPFSYHFINGIRHLVFDLGIGYKKVQF 166
Query: 82 KK 83
KK
Sbjct: 167 KK 168
>gi|384262921|ref|YP_005418109.1| Succinate dehydrogenase subunit C [Rhodospirillum photometricum DSM
122]
gi|378404023|emb|CCG09139.1| Succinate dehydrogenase subunit C [Rhodospirillum photometricum DSM
122]
Length = 168
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLV 101
YH NG+RHL+WDTG + + TG +G+A++ +++
Sbjct: 120 YHLTNGLRHLLWDTGFGFDMPTLRKTGAVAIGSAVVLSVL 159
>gi|302896466|ref|XP_003047113.1| hypothetical protein NECHADRAFT_70858 [Nectria haematococca mpVI
77-13-4]
gi|256728041|gb|EEU41400.1| hypothetical protein NECHADRAFT_70858 [Nectria haematococca mpVI
77-13-4]
Length = 189
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 13/101 (12%)
Query: 6 SITHRGTGVALTAYALGLAG-------VGLTTDINSVVSFVDALNLSAPILLAG--KFIL 56
S +R TG L+A G VGL + SV + L P+++ G K L
Sbjct: 84 SAWNRITGCTLSATMYAFMGAYLVAPVVGLHLETASVAAAFGGL----PLVVKGGVKLAL 139
Query: 57 AFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAIL 97
FP YH NG +HL++D G+ + T + A+IL
Sbjct: 140 GFPFVYHLINGFKHLLYDMGKGFAKPTIKKTDNILWAASIL 180
>gi|294676288|ref|YP_003576903.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodobacter
capsulatus SB 1003]
gi|294475108|gb|ADE84496.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodobacter
capsulatus SB 1003]
Length = 132
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 1 ITSVLSITHRGTGVALTA-YALGLAGVGLTTDINSVVSFVDALNLS--APILLAGKFILA 57
+TS+ SI R TG AL A + LG + FV+ + S ++ AG +A
Sbjct: 24 MTSMSSILTRITGNALIAGFLLGAWWLIAAVSSPGYFGFVNWIVTSWLGWLIFAG---MA 80
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGY 89
+ + YH G+RHL+WDTG+ L I+ G+
Sbjct: 81 WAMWYHYLTGLRHLLWDTGKGLDIETAEKLGW 112
>gi|409400311|ref|ZP_11250421.1| succinate dehydrogenase cytochrome b subunit [Acidocella sp.
MX-AZ02]
gi|409130696|gb|EKN00443.1| succinate dehydrogenase cytochrome b subunit [Acidocella sp.
MX-AZ02]
Length = 145
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 1 ITSVLSITHRGTGVALTA----YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFIL 56
++S+ SI HR TG AL A L L S++ + A + IL F
Sbjct: 36 MSSLSSILHRITGCALGAGTILMTLWLVCAASGDGAFSIIQAIWASWIGMLIL----FGF 91
Query: 57 AFPVSYHTANGIRHLIWDTGRALTIKKVYTTG 88
+ YH NGIRHL WD+G+ + ++ G
Sbjct: 92 TVALFYHFCNGIRHLAWDSGKGFELPDMHRNG 123
>gi|342880738|gb|EGU81761.1| hypothetical protein FOXB_07716 [Fusarium oxysporum Fo5176]
Length = 188
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 26 VGLTTDINSVVSFVDALNLSAPILLAGKF-ILAFPVSYHTANGIRHLIWDTGRALTIKKV 84
+G+ D ++VS AL +A + KF +L FP +YH NGIRHL++D G +
Sbjct: 109 LGMGFDSAALVSAFGALPFAAKAAI--KFGLLGFPFTYHFINGIRHLVFDLGFGYKKAQF 166
Query: 85 YTTGYAMLGAAILTNLVLTL 104
+ A +IL LVL
Sbjct: 167 KKSEAATWILSILGGLVLAF 186
>gi|365899528|ref|ZP_09437423.1| Succinate dehydrogenase cytochrome b556 subunit [Bradyrhizobium sp.
STM 3843]
gi|365419719|emb|CCE09965.1| Succinate dehydrogenase cytochrome b556 subunit [Bradyrhizobium sp.
STM 3843]
Length = 132
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 54/115 (46%), Gaps = 21/115 (18%)
Query: 1 ITSVLSITHRGTGVALT------AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKF 54
+T +LSI HR TG+AL A+ L A G S S+V A S + G+
Sbjct: 20 LTMILSIVHRATGIALYFGTLLLAWWLIAAASG-----PSAYSYVQAFTSS----IIGRL 70
Query: 55 I---LAFPVSYHTANGIRHLIWDTGRALTI--KKVYTTGYAMLGAAILTNLVLTL 104
I + + +H +GIRH +WD G ++ T G A++G LT LV L
Sbjct: 71 IVFGFTWALLHHLLSGIRHFVWDLGYGFKPNEREALTWG-ALIGGIFLTVLVWIL 124
>gi|302898077|ref|XP_003047773.1| hypothetical protein NECHADRAFT_50762 [Nectria haematococca mpVI
77-13-4]
gi|256728704|gb|EEU42060.1| hypothetical protein NECHADRAFT_50762 [Nectria haematococca mpVI
77-13-4]
Length = 188
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 16 LTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKF-ILAFPVSYHTANGIRHLIWD 74
L AYA+ +GL D +V S +L + A KF +L FP SYH NG+RHL++D
Sbjct: 100 LCAYAVAPL-LGLPFDSAAVASAFGSLPFV--VKAAVKFGLLGFPFSYHFVNGVRHLVFD 156
Query: 75 TGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
G + + A +I+ LVL
Sbjct: 157 LGFGYKKAQFRKSEAATWTLSIIGGLVLAFF 187
>gi|407798222|ref|ZP_11145130.1| succinate dehydrogenase, cytochrome b556 subunit [Oceaniovalibus
guishaninsula JLT2003]
gi|407059658|gb|EKE45586.1| succinate dehydrogenase, cytochrome b556 subunit [Oceaniovalibus
guishaninsula JLT2003]
Length = 127
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLV 101
F+ + + YH G+RHL WD+G +K V G+ ++G +IL +V
Sbjct: 75 FLSLWALWYHFLAGLRHLYWDSGAGFDLKTVNILGWGVVGGSILLTIV 122
>gi|421850116|ref|ZP_16283084.1| succinate dehydrogenase cytochrome b subunit [Acetobacter
pasteurianus NBRC 101655]
gi|421852731|ref|ZP_16285416.1| succinate dehydrogenase cytochrome b subunit [Acetobacter
pasteurianus subsp. pasteurianus LMG 1262 = NBRC
106471]
gi|371459112|dbj|GAB28287.1| succinate dehydrogenase cytochrome b subunit [Acetobacter
pasteurianus NBRC 101655]
gi|371479062|dbj|GAB30619.1| succinate dehydrogenase cytochrome b subunit [Acetobacter
pasteurianus subsp. pasteurianus LMG 1262 = NBRC
106471]
Length = 122
Score = 38.9 bits (89), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 4 VLSITHRGTGVALTAYA-LGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILA---FP 59
VLSI +R TGV TA A LG+ +G +F A ++ L G+ +L
Sbjct: 2 VLSIMNRITGVIATAGATLGVFWLGAAA--KGPKAFATARKVTGNPL--GQLVLLGWLAS 57
Query: 60 VSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLG 93
V YHT GIRHLIWD+G K+V G +G
Sbjct: 58 VIYHTVGGIRHLIWDSGYRYDKKEVNKDGPVAVG 91
>gi|300024743|ref|YP_003757354.1| succinate dehydrogenase, cytochrome b556 subunit [Hyphomicrobium
denitrificans ATCC 51888]
gi|299526564|gb|ADJ25033.1| succinate dehydrogenase, cytochrome b556 subunit [Hyphomicrobium
denitrificans ATCC 51888]
Length = 137
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 11/107 (10%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPIL--LAGKFIL-- 56
I ++SI HR TGVAL + + L + + S D + A +L GK +L
Sbjct: 26 INMMMSIVHRITGVALY-----VGSLLLAVWLLAAASGPDYYDYVAGLLGSWPGKIVLLG 80
Query: 57 -AFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAML-GAAILTNLV 101
+ + +H G+RH IWDTGR +K V + L G+ +LT L+
Sbjct: 81 YTWALMHHLLGGLRHFIWDTGRGYDLKTVDLLSWGTLAGSLVLTALI 127
>gi|349687371|ref|ZP_08898513.1| succinate dehydrogenase, cytochrome b556 subunit [Gluconacetobacter
oboediens 174Bp2]
Length = 130
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 48 ILLAGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
+LLAG A + YH GIRHL+WD+G + K++ G +G + T L L
Sbjct: 62 MLLAG---WALALVYHFVAGIRHLVWDSGYRFSKKEINEDGPVAVGVTVGTTLAL 113
>gi|303285256|ref|XP_003061918.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456329|gb|EEH53630.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 208
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Query: 6 SITHRGTGVALTAYALGLAGV-GLTTDINSVVSFVDALNLSAPILL-AGKFILAFPVSYH 63
SIT+R TG L+ + GV ++ +FV+ P ++ K FP YH
Sbjct: 105 SITNRVTGCVLSG-GVAFGGVLSFVGGPETLPAFVEGFKSWLPFMVYPTKLAFGFPFVYH 163
Query: 64 TANGIRHLIWD 74
T G RHL WD
Sbjct: 164 TLGGFRHLYWD 174
>gi|349701089|ref|ZP_08902718.1| succinate dehydrogenase, cytochrome b556 subunit [Gluconacetobacter
europaeus LMG 18494]
Length = 130
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 48 ILLAGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
+LLAG A + YH GIRHL+WD+G + K++ G +G + T L L
Sbjct: 62 MLLAG---WALALVYHFVAGIRHLVWDSGYRFSKKEINEDGPVAVGVTVGTTLAL 113
>gi|254450977|ref|ZP_05064414.1| succinate dehydrogenase, cytochrome b556 subunit [Octadecabacter
arcticus 238]
gi|198265383|gb|EDY89653.1| succinate dehydrogenase, cytochrome b556 subunit [Octadecabacter
arcticus 238]
Length = 103
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAIL 97
YHT G+RHLIWD+G L +++ G A++ ++L
Sbjct: 59 YHTLAGVRHLIWDSGHMLDVERSERAGQAIVLVSVL 94
>gi|170744094|ref|YP_001772749.1| succinate dehydrogenase, cytochrome b556 subunit [Methylobacterium
sp. 4-46]
gi|168198368|gb|ACA20315.1| succinate dehydrogenase, cytochrome b556 subunit [Methylobacterium
sp. 4-46]
Length = 133
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Query: 2 TSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGK---FILAF 58
T +S+ HR TG+AL L V L + ++ L IL G+ F+ +
Sbjct: 25 TMAMSVAHRLTGIALYG-GTALVAVWLVALASGKAAYDPVAWLYGSIL--GRLVIFVYTW 81
Query: 59 PVSYHTANGIRHLIWDTGRALTI-KKVYTTGYAMLGAAILTNLV 101
+ +H GIRHLIWD G + ++ Y ++G+A+LT ++
Sbjct: 82 ILMHHMLGGIRHLIWDFGHGMEPGTRIAMARYTLVGSAVLTVVI 125
>gi|408373669|ref|ZP_11171363.1| succinate dehydrogenase, cytochrome b556 subunit [Alcanivorax
hongdengensis A-11-3]
gi|407766373|gb|EKF74816.1| succinate dehydrogenase, cytochrome b556 subunit [Alcanivorax
hongdengensis A-11-3]
Length = 124
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNL-SAPILLAGKFILAFP 59
+T++ SITHR TGVA+ AL + L + S SF D +L ++P+ + +
Sbjct: 18 VTAIASITHRVTGVAIF-LALPILLWMLDRSLASPESFADLKDLMTSPLAKLVVWAILAV 76
Query: 60 VSYHTANGIRHLIWDTGRALTIK 82
+ YH GIRHLI DTG T++
Sbjct: 77 LLYHLVAGIRHLIMDTGTGETLE 99
>gi|119503172|ref|ZP_01625256.1| succinate dehydrogenase (C subunit) [marine gamma proteobacterium
HTCC2080]
gi|119460818|gb|EAW41909.1| succinate dehydrogenase (C subunit) [marine gamma proteobacterium
HTCC2080]
Length = 129
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVD-ALNLSAPILLAGKFILAFP 59
IT+ +SITHR +GV L + GL L T + S F A L+ P+ A +++A
Sbjct: 23 ITAYVSITHRLSGVFLFLVS-GLMVWALDTSLRSEEGFNSVASTLTMPLSKAILWLIASA 81
Query: 60 VSYHTANGIRHLIWDTGRALTIK 82
+SYH +G++H+I D G T++
Sbjct: 82 LSYHALSGVKHIIMDFGIGETMQ 104
>gi|254283025|ref|ZP_04957993.1| succinate dehydrogenase, cytochrome b556 subunit [gamma
proteobacterium NOR51-B]
gi|219679228|gb|EED35577.1| succinate dehydrogenase, cytochrome b556 subunit [gamma
proteobacterium NOR51-B]
Length = 111
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVD-ALNLSAPILLAGKFILAFP 59
+T+ SI HR +GVAL ++ L L + S SF + A LS+P+ A +++A
Sbjct: 5 VTAWASIAHRVSGVALFGMSI-LMVWALDASLASEQSFNELAAVLSSPVAKAILWLVAVA 63
Query: 60 VSYHTANGIRHLIWDTGRALTIK 82
++YH+ G++H++ D G T++
Sbjct: 64 LTYHSLAGVKHIVMDFGYGETLE 86
>gi|160872194|ref|ZP_02062326.1| succinate dehydrogenase, cytochrome b556 subunit [Rickettsiella
grylli]
gi|159120993|gb|EDP46331.1| succinate dehydrogenase, cytochrome b556 subunit [Rickettsiella
grylli]
Length = 123
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDA-LNLSAPILLAGKFILAFP 59
+T+++SI HR +G L A+ + + +T + S +F + P++
Sbjct: 17 MTAIVSILHRLSGF-LLFLAIPVFLMLMTLTLQSPEAFFTVHVCFEHPLMKLFLLGFLAA 75
Query: 60 VSYHTANGIRHLIWDTGRALTIKKV-YTTGYAMLGAAILTNLV 101
+ YH GIRHL D G A T+K +T G+ M+ +LT+L+
Sbjct: 76 LFYHLFAGIRHLFMDAGVADTLKSAQWTAGFVMVATLVLTSLM 118
>gi|374571973|ref|ZP_09645069.1| succinate dehydrogenase, cytochrome b556 subunit [Bradyrhizobium
sp. WSM471]
gi|374420294|gb|EHQ99826.1| succinate dehydrogenase, cytochrome b556 subunit [Bradyrhizobium
sp. WSM471]
Length = 132
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFI---LA 57
+T LSI HR TG+AL A L LA L + ++ + I+ G+ I
Sbjct: 20 LTMALSIVHRATGIALYAGTLLLA-WWLIAAASGPAAYSHVQAFTGSII--GRLIVFGFT 76
Query: 58 FPVSYHTANGIRHLIWDTGRALTI--KKVYTTGYAMLGAAILTNLV 101
+ + +H +GIRH +WD G ++ T G A++G +LT LV
Sbjct: 77 WALMHHMLSGIRHFVWDLGYGFKANEREALTWG-ALIGGVVLTVLV 121
>gi|42521018|ref|NP_966933.1| succinate dehydrogenase, cytochrome b556 subunit [Wolbachia
endosymbiont of Drosophila melanogaster]
gi|42410759|gb|AAS14867.1| succinate dehydrogenase, cytochrome b556 subunit [Wolbachia
endosymbiont of Drosophila melanogaster]
Length = 125
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINS---VVSFVDALNLSAPILLAGKFILA 57
+TS SI HR TG+ L + L+ + +V +++AL + LA ++L
Sbjct: 17 VTSFFSIMHRLTGILLFLLLMILSWYFILHVYFPELLIVRYLNALLFTPVAKLA--YVLC 74
Query: 58 F-PVSYHTANGIRHLIWDTGRALTI 81
F YH NGIRHL+WD G L I
Sbjct: 75 FISFVYHFLNGIRHLLWDVGLNLEI 99
>gi|365759027|gb|EHN00841.1| YMR118C-like protein [Saccharomyces cerevisiae x Saccharomyces
kudriavzevii VIN7]
Length = 196
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 54/110 (49%), Gaps = 15/110 (13%)
Query: 5 LSITHRGTGV--ALTAYALGLA-GV----GLTTDINSVVSFV-DALNLSAPILLAGK--F 54
LS HR +GV AL YA + GV G+ T + + + + L + L+ G +
Sbjct: 90 LSSLHRISGVLLALAFYAFTITLGVKTMLGMETTVQDLNKWYHEKLPKWSQWLIKGSAGY 149
Query: 55 ILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAML-GAAILTNLVLT 103
+ AF H NGIRHLIWD G +T V TG +L G +L +LT
Sbjct: 150 LFAF----HFGNGIRHLIWDMGYEMTNPGVIKTGSIVLAGTLVLGTYLLT 195
>gi|407976712|ref|ZP_11157609.1| succinate dehydrogenase, cytochrome b556 subunit [Nitratireductor
indicus C115]
gi|407427839|gb|EKF40526.1| succinate dehydrogenase, cytochrome b556 subunit [Nitratireductor
indicus C115]
Length = 135
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 12/108 (11%)
Query: 2 TSVLSITHRGTGVALT-AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFIL---A 57
T ++SI HR TG AL L + V V+A+ S G+ +L
Sbjct: 24 TMLMSIIHRITGGALYFGIVLFVVWVAAAAASKEAFDLVNAVYGS----WFGRLVLFGFT 79
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
+ + +H G+RHL+WDTGRAL +K +T M A+I+ +++LT+L
Sbjct: 80 WALLHHMIGGLRHLVWDTGRAL--EKATST--KMAKASIVISVILTVL 123
>gi|338741409|ref|YP_004678371.1| succinate dehydrogenase, cytochrome b556 subunit [Hyphomicrobium
sp. MC1]
gi|337761972|emb|CCB67807.1| succinate dehydrogenase, cytochrome b556 subunit [Hyphomicrobium
sp. MC1]
Length = 136
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALN--LSAPILLAGKFIL-- 56
I V+SI HR TG AL +L LA + + S DA N LS GK +L
Sbjct: 26 INMVMSIVHRITGAALYFGSLLLAWW-----LIAAASGPDAYNYFLSWCDTWFGKLVLLG 80
Query: 57 -AFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAI 96
+ + +H GIRH IWD+G ++ V + L A++
Sbjct: 81 YTWVLMHHMMGGIRHFIWDSGHGYDLETVDLLSWGSLAASL 121
>gi|401841443|gb|EJT43831.1| SHH3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 196
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 54/110 (49%), Gaps = 15/110 (13%)
Query: 5 LSITHRGTGV--ALTAYALGLA-GV----GLTTDINSVVSFV-DALNLSAPILLAGK--F 54
LS HR +GV AL YA + GV G+ T + + + + L + L+ G +
Sbjct: 90 LSSLHRISGVLLALAFYAFTITLGVKTMLGMETTVQDLNKWYHEKLPKWSQWLIKGSAGY 149
Query: 55 ILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAML-GAAILTNLVLT 103
+ AF H NGIRHLIWD G +T V TG +L G +L +LT
Sbjct: 150 LFAF----HFGNGIRHLIWDMGYEMTNPGVIKTGSIVLAGTLVLGTYLLT 195
>gi|288957014|ref|YP_003447355.1| succinate dehydrogenase cytochrome b-556 subunit [Azospirillum sp.
B510]
gi|288909322|dbj|BAI70811.1| succinate dehydrogenase cytochrome b-556 subunit [Azospirillum sp.
B510]
Length = 142
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 40/92 (43%), Gaps = 22/92 (23%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF-- 58
+T+V+SITHR TGV L L L V V A A FI +F
Sbjct: 33 LTAVMSITHRITGVGLAVGTLLL-----------VWWLVAAAAGPEAFARAQGFIGSFFG 81
Query: 59 ---------PVSYHTANGIRHLIWDTGRALTI 81
+ YH NGIRHL+WD G++ +
Sbjct: 82 LLLMFGWSAALYYHLCNGIRHLVWDAGKSFEL 113
>gi|333983833|ref|YP_004513043.1| succinate dehydrogenase, cytochrome b556 subunit [Methylomonas
methanica MC09]
gi|333807874|gb|AEG00544.1| succinate dehydrogenase, cytochrome b556 subunit [Methylomonas
methanica MC09]
Length = 123
Score = 38.1 bits (87), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 14/101 (13%)
Query: 1 ITSVLSITHRGTGVALT------AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKF 54
+T ++SITHR TGV L+ Y L G T ++ D ++ L+ F
Sbjct: 18 LTGLISITHRMTGVLLSMGLVLFVYVLFAIAAGEAT----YLAMQDFMSFWLFKLVYWGF 73
Query: 55 ILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAA 95
I + + +H +G RHLIWD G+ T + YA++ A
Sbjct: 74 I--YSLFFHLCHGTRHLIWDVGK--TFDRATLDKYALIELA 110
>gi|320038993|gb|EFW20928.1| succinate dehydrogenase cytochrome b560 subunit [Coccidioides
posadasii str. Silveira]
Length = 193
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Query: 1 ITSVLSITHRGTGVALTA--YALGLAGV-----GLTTDINSVVSFVDALNLSAPILLAGK 53
ITSV+S R TG+ L+ Y G A V G S+ + AL + A K
Sbjct: 83 ITSVVSSLERLTGMMLSGGLYLFGTAYVVSPYLGWDLSSASLAAAFGALPFA--TKAAAK 140
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTG 88
F +A+P +H NG ++++W G+ L K V G
Sbjct: 141 FSIAWPFLFHCLNGTKYMVWSWGKLLNNKAVIQAG 175
>gi|15004516|gb|AAK77129.1|AF362733_1 succinate dehydrogenase subunit 3 [Gymnocladus dioicus]
Length = 92
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Query: 1 ITSVLSITHRGTG-----VALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFI 55
+TS SI HR +G + L Y L L +GL S +F L + ++L I
Sbjct: 6 LTSTFSIFHRISGAFLATIVLFFYLLCLK-IGLICFTYS--NFYQFLFFLSKLILISVEI 62
Query: 56 LAFPVSYHTANGIRHLIWDTGRALTIK 82
A +SYH NG+RHL+ D G L ++
Sbjct: 63 TALALSYHLYNGVRHLLTDLGGFLFLR 89
>gi|58698191|ref|ZP_00373112.1| succinate dehydrogenase, cytochrome b556 subunit [Wolbachia
endosymbiont of Drosophila ananassae]
gi|225630885|ref|YP_002727676.1| succinate dehydrogenase, cytochrome b556 subunit [Wolbachia sp.
wRi]
gi|58535272|gb|EAL59350.1| succinate dehydrogenase, cytochrome b556 subunit [Wolbachia
endosymbiont of Drosophila ananassae]
gi|225592866|gb|ACN95885.1| succinate dehydrogenase, cytochrome b556 subunit [Wolbachia sp.
wRi]
Length = 125
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINS---VVSFVDALNLSAPILLAGKFILA 57
+TS SI HR TG+ L + L+ + +V +++AL + LA ++L
Sbjct: 17 VTSFFSIMHRLTGILLFLLLMILSWYFILHVYFPELLIVRYLNALLFTPVAKLA--YVLC 74
Query: 58 F-PVSYHTANGIRHLIWDTGRALTI 81
F YH NGIRHL+WD G L I
Sbjct: 75 FISFVYHFLNGIRHLLWDAGLNLEI 99
>gi|374620031|ref|ZP_09692565.1| succinate dehydrogenase, cytochrome b556 subunit [gamma
proteobacterium HIMB55]
gi|374303258|gb|EHQ57442.1| succinate dehydrogenase, cytochrome b556 subunit [gamma
proteobacterium HIMB55]
Length = 129
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSF---VDALNLSAPILLAGKFILA 57
IT+ SI+HR TGV L +L L L ++S SF V LN S ++ F++
Sbjct: 23 ITAWASISHRVTGVLLFVSSL-LMVWALDMSLSSQESFDALVTILNSSVAKVVLWGFLVV 81
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLV 101
F SYH GIRHLI D G K + GAA + +V
Sbjct: 82 F--SYHALAGIRHLIMDMGVGEDFKGGALGARILFGAAAIAAVV 123
>gi|367003635|ref|XP_003686551.1| hypothetical protein TPHA_0G02790 [Tetrapisispora phaffii CBS 4417]
gi|357524852|emb|CCE64117.1| hypothetical protein TPHA_0G02790 [Tetrapisispora phaffii CBS 4417]
Length = 184
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 6/40 (15%)
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLG 93
F L F +S +RH +WD G+ L++K VY TGY L
Sbjct: 140 FALQFTLS------VRHFVWDMGKELSLKGVYRTGYGALA 173
>gi|401626275|gb|EJS44228.1| YMR118C [Saccharomyces arboricola H-6]
Length = 193
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 55/113 (48%), Gaps = 21/113 (18%)
Query: 5 LSITHRGTGVALTAYALGL----AGVGLTTDINSVVSFVD-------ALNLSAPILLAGK 53
LS HR +GV L ALG +G+TT + ++F D L + +L+ G
Sbjct: 87 LSSLHRISGVLL---ALGFYVFTVTLGVTTILGIDLTFQDLNKWYHEKLPKWSQLLVKGS 143
Query: 54 --FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAML-GAAILTNLVLT 103
++ AF H NGIRHL+WD G LT V TG +L G IL +LT
Sbjct: 144 AGYLFAF----HFGNGIRHLVWDMGYELTNPGVIKTGSIVLAGTLILGTYLLT 192
>gi|384921879|ref|ZP_10021840.1| succinate dehydrogenase subunit C [Citreicella sp. 357]
gi|384464294|gb|EIE48878.1| succinate dehydrogenase subunit C [Citreicella sp. 357]
Length = 131
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALN-----LSAPILLAGKFI 55
+T+V S+ R TG AL A A L + ++ S DA L++ I F
Sbjct: 24 LTAVTSVMIRFTGNALMA-----AVFFLIVWLLALASGPDAFETVEWWLTSFIFDLFWFF 78
Query: 56 LAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGY-AMLGAAILTNL 100
+ + V YH G+RHLI+D G+ L I+ G+ + G+ +LT L
Sbjct: 79 MLWSVWYHYLGGLRHLIFDAGKGLEIETAEKMGWICVYGSVVLTIL 124
>gi|120598552|ref|YP_963126.1| succinate dehydrogenase, cytochrome subunit B [Shewanella sp.
W3-18-1]
gi|146293369|ref|YP_001183793.1| succinate dehydrogenase, cytochrome subunit B [Shewanella
putrefaciens CN-32]
gi|386314046|ref|YP_006010211.1| succinate dehydrogenase, cytochrome b556 subunit [Shewanella
putrefaciens 200]
gi|120558645|gb|ABM24572.1| succinate dehydrogenase subunit C [Shewanella sp. W3-18-1]
gi|145565059|gb|ABP75994.1| succinate dehydrogenase subunit C [Shewanella putrefaciens CN-32]
gi|319426671|gb|ADV54745.1| succinate dehydrogenase, cytochrome b556 subunit [Shewanella
putrefaciens 200]
Length = 131
Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 2 TSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFIL---AF 58
T++ SI HR +GV + +A+G+ L + + S SF +L ++ KFIL
Sbjct: 26 TAIASILHRVSGVIML-FAVGILIWLLNSSLASAESFASVQSLFDNFIM--KFILWGIMT 82
Query: 59 PVSYHTANGIRHLIWDTGR 77
++YH G+RHL+ DTGR
Sbjct: 83 ALAYHLFGGLRHLVMDTGR 101
>gi|378786320|dbj|BAL63251.1| succinate:cytochrome c oxidoreductase subunit 3 (mitochondrion)
[Pyropia dentata]
Length = 127
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Query: 2 TSVLSITHRGTGVAL----TAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGK-FIL 56
+S LSI HR +G+ + + + L + + V F+ L +L + K FI+
Sbjct: 20 SSTLSIWHRISGIVMFVIAIVFIVFLNNIYFSYSTIFVAKFLVEYILFDWLLFSCKLFII 79
Query: 57 AFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAI 96
A + YH +NG RHL WD+ + K++ G +L I
Sbjct: 80 AIFL-YHISNGTRHLFWDSVIHVNTSKMHKDGNILLFFVI 118
>gi|378786317|dbj|BAL63249.1| succinate:cytochrome c oxidoreductase subunit 3 (mitochondrion)
[Pyropia suborbiculata]
Length = 129
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 17/110 (15%)
Query: 2 TSVLSITHRGTGVA----------LTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLA 51
+S+ SI HR +GV L Y L+T + D L S +++
Sbjct: 20 SSICSIWHRISGVIMFVLIFSPLLLLNYTYFSYSNSLSTSTLFYYAITDWLLFSCRLMIM 79
Query: 52 GKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLV 101
F+ YHT NG+RH +WD+ + K+++ ++L + N+V
Sbjct: 80 SIFL------YHTTNGVRHFLWDSVVNVNTKRMHKDS-SLLLVFVFINMV 122
>gi|153001031|ref|YP_001366712.1| succinate dehydrogenase cytochrome b556 subunit [Shewanella baltica
OS185]
gi|151365649|gb|ABS08649.1| Succinate dehydrogenase cytochrome b556 subunit [Shewanella baltica
OS185]
Length = 131
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Query: 2 TSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFIL---AF 58
T+++SI HR +GV + +A+G+ L + + S SF +L ++ KFIL
Sbjct: 26 TAIVSILHRVSGVIML-FAVGILIWLLNSSLASAESFAGVQSLFDNFVM--KFILWGIMT 82
Query: 59 PVSYHTANGIRHLIWDTGR 77
++YH G+RHL+ DTGR
Sbjct: 83 ALAYHLFGGLRHLVMDTGR 101
>gi|46110198|ref|XP_382157.1| hypothetical protein FG01981.1 [Gibberella zeae PH-1]
Length = 183
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 26 VGLTTDINSVVSFVDALNLSAPILLAGKF-ILAFPVSYHTANGIRHLIWDTG 76
+GL D ++VS AL A + KF +L FP SYH NGIRHL++D G
Sbjct: 104 LGLGFDSVALVSAFGALPFVAKAAI--KFSLLGFPFSYHFINGIRHLVFDLG 153
>gi|84684219|ref|ZP_01012121.1| Succinate dehydrogenase cytochrome b-556 subunit [Maritimibacter
alkaliphilus HTCC2654]
gi|84667972|gb|EAQ14440.1| Succinate dehydrogenase cytochrome b-556 subunit [Rhodobacterales
bacterium HTCC2654]
Length = 127
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 10/89 (11%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPV 60
+ + LSI HR TGVA+ G +GV + ++ + + ++ +L + + F +
Sbjct: 22 LNAKLSILHRITGVAM-----GFSGVLIVWYFLALATGPEYFETASAVLTSWFGDIVFFL 76
Query: 61 S-----YHTANGIRHLIWDTGRALTIKKV 84
S H ANG+RHLIWDTG K V
Sbjct: 77 SICALWLHFANGVRHLIWDTGSHFGQKTV 105
>gi|91974961|ref|YP_567620.1| succinate dehydrogenase, cytochrome b subunit [Rhodopseudomonas
palustris BisB5]
gi|91681417|gb|ABE37719.1| succinate dehydrogenase subunit C [Rhodopseudomonas palustris
BisB5]
Length = 129
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFIL---A 57
+T LSI HR TG+AL L LA L S+ + + + G+ IL
Sbjct: 17 LTMALSIVHRATGIALYFGTLLLAW-WLIACAAGPASYANLQAFTGSWI--GRLILFGYT 73
Query: 58 FPVSYHTANGIRHLIWDTGRAL-TIKKVYTTGYAMLGAAILTNL 100
+ + +H +G+RH +WD G T + + T A++G +LT L
Sbjct: 74 WSLMHHLLSGVRHFVWDLGYGFKTADREWLTWAALIGGVVLTVL 117
>gi|58616911|ref|YP_196110.1| succinate dehydrogenase cytochrome B-556 subunit [Ehrlichia
ruminantium str. Gardel]
gi|58416523|emb|CAI27636.1| Succinate dehydrogenase cytochrome B-556 subunit [Ehrlichia
ruminantium str. Gardel]
Length = 132
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 60 VSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLV 101
+ YH NG+RH++WD G LT V T+G +L ++L + +
Sbjct: 82 LCYHYLNGVRHILWDFGLGLTKSAVKTSGIVVLVLSLLFSFI 123
>gi|357406018|ref|YP_004917942.1| succinate dehydrogenase cytochrome b556 subunit [Methylomicrobium
alcaliphilum 20Z]
gi|351718683|emb|CCE24357.1| Succinate dehydrogenase cytochrome b556 subunit [Methylomicrobium
alcaliphilum 20Z]
Length = 126
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 16/84 (19%)
Query: 1 ITSVLSITHRGTGVALTAYALGL--------AGVGLTTDINSVVSFVDALNLSAPILLAG 52
+T ++SITHR TGV L+ LGL A G ++ + D++ L I+L G
Sbjct: 19 LTGLISITHRMTGVMLS---LGLILFLCMLYAIAGGAEAFAAMQAMTDSILLQ--IVLWG 73
Query: 53 KFILAFPVSYHTANGIRHLIWDTG 76
+ + +H +G+RHLIWD G
Sbjct: 74 ---FMYALFFHLCHGVRHLIWDAG 94
>gi|209916098|gb|ACI95893.1| succinate dehydrogenase subunit 3 [Isoetes engelmannii]
gi|217331572|gb|ACK38298.1| succinate dehydrogenase subunit 3 [Isoetes engelmannii]
gi|217331586|gb|ACK38312.1| succinate dehydrogenase subunit 3 [Isoetes engelmannii]
Length = 98
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 1 ITSVLSITHRGTGVALTA---YALGLAGVG-LTTDINSVVSFVDALNLSAPILLAGKFIL 56
+TS SI HR +G L A ++L +G L+ SF + ILL L
Sbjct: 18 LTSTFSIFHRISGALLAAKVLFSLPFWKIGDLSLTFYHSYSFFFFVFHWFIILLVNLTFL 77
Query: 57 AFPVSYHTANGIRHLIWDTG 76
AF YH +NG+RHL WD G
Sbjct: 78 AF--CYHMSNGVRHLWWDRG 95
>gi|110834361|ref|YP_693220.1| succinate dehydrogenase, cytochrome b556 subunit [Alcanivorax
borkumensis SK2]
gi|110647472|emb|CAL16948.1| succinate dehydrogenase, cytochrome b556 subunit [Alcanivorax
borkumensis SK2]
Length = 125
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF-- 58
+T++ SITHR TGVA+ AL + L + S SF D L LL + A
Sbjct: 18 VTAIASITHRVTGVAIF-LALPILLWMLDRSLTSPESFADLKELMMTSLLVKLVVWAILS 76
Query: 59 PVSYHTANGIRHLIWDTG 76
+ YH GIRHLI D G
Sbjct: 77 VLLYHLVAGIRHLIMDAG 94
>gi|260576579|ref|ZP_05844567.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodobacter sp.
SW2]
gi|259021183|gb|EEW24491.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodobacter sp.
SW2]
Length = 131
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Query: 60 VSYHTANGIRHLIWDTGRALTIKKVYTTGYAM-LGAAILTNLVLTLL 105
+ YH G+RHL WDTG+ L ++ V + M +G +LT VLT+L
Sbjct: 82 IWYHYLGGLRHLYWDTGKGLDLETVDKLSWGMVIGTPVLT--VLTIL 126
>gi|389794955|ref|ZP_10198093.1| succinate dehydrogenase membrane anchor subunit [Rhodanobacter
fulvus Jip2]
gi|388431406|gb|EIL88477.1| succinate dehydrogenase membrane anchor subunit [Rhodanobacter
fulvus Jip2]
Length = 111
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 11/104 (10%)
Query: 4 VLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAP-----ILLAGKFILAF 58
V SI HR TG+AL+ +L L GL SF D A +LL G ++
Sbjct: 2 VSSILHRATGIALSVGSL-LVVWGLLALAGGEQSF-DQFKSCAGSPLGLVLLVG---WSW 56
Query: 59 PVSYHTANGIRHLIWDTGRALTIKK-VYTTGYAMLGAAILTNLV 101
+ YH NGIRHL+ D G I + V ++ + +G+ +LT LV
Sbjct: 57 SLFYHLCNGIRHLLQDAGAGYEIVQFVRSSWLSAVGSIVLTVLV 100
>gi|146276143|ref|YP_001166302.1| succinate dehydrogenase, cytochrome b subunit [Rhodobacter
sphaeroides ATCC 17025]
gi|145554384|gb|ABP68997.1| succinate dehydrogenase subunit C [Rhodobacter sphaeroides ATCC
17025]
Length = 127
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAA 95
+ + YH G+RHL WDTG+ L I G+A +G +
Sbjct: 79 WALWYHYLAGLRHLYWDTGKGLEITTAEKLGWACIGGS 116
>gi|27375623|ref|NP_767152.1| succinate dehydrogenase cytochrome B-556 subunit [Bradyrhizobium
japonicum USDA 110]
gi|3169722|gb|AAC17940.1| succinate dehydrogenase membrane anchor subunit [Bradyrhizobium
japonicum]
gi|27348760|dbj|BAC45777.1| succinate dehydrogenase cytochrome B-556 subunit [Bradyrhizobium
japonicum USDA 110]
Length = 132
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 9/106 (8%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFIL---A 57
+T LSI HR TG+AL A L LA L + ++ + I+ G+ I+
Sbjct: 20 LTMALSIVHRATGIALYAGTLLLA-WWLIAAASGPAAYSHVQAFTGSII--GRLIVFGYT 76
Query: 58 FPVSYHTANGIRHLIWDTGRALTI--KKVYTTGYAMLGAAILTNLV 101
+ + +H +GIRH +WD G ++ T G A++G +LT L+
Sbjct: 77 WALMHHMLSGIRHFVWDLGYGFKANEREALTWG-ALIGGIVLTVLI 121
>gi|297183595|gb|ADI19722.1| hypothetical protein [uncultured bacterium EB000_36F02]
Length = 127
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 17/110 (15%)
Query: 1 ITSVLSITHRGTGV----ALTAYALGLAGVGL-TTDINSVVSFVDALNLSAPILLAGKFI 55
I+S++SI+HR TGV ALT L + + L + + F+ + GKF+
Sbjct: 18 ISSLISISHRITGVINILALTLICLWIVLLLLGEVNYEYIKFFLQSF--------LGKFL 69
Query: 56 ---LAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGY-AMLGAAILTNLV 101
L + S+ + IRHL WD G + TG + G+ +LT L+
Sbjct: 70 ILCLIWSFSFQILSEIRHLFWDLGYGFELMTSKITGLIVIFGSFVLTILI 119
>gi|378786343|dbj|BAL63266.1| succinate:cytochrome c oxidoreductase subunit 3 (mitochondrion)
[Porphyra yamadae]
Length = 129
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 2 TSVLSITHRGTGVAL------TAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFI 55
+S++SI HR +GV + T L A TT + F+ +S+ +L + +
Sbjct: 20 SSLISIWHRISGVTIFVLIVSTLLLLNQAYFSYTTIF--LTKFLSDHAISSLLLFCCRLL 77
Query: 56 LAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAML 92
++ YH NGI H +WD+ + K+++ +L
Sbjct: 78 ISIIFLYHITNGIYHFLWDSVMHVNTKRIHKDNNLLL 114
>gi|407778320|ref|ZP_11125585.1| succinate dehydrogenase, cytochrome b556 subunit [Nitratireductor
pacificus pht-3B]
gi|407300001|gb|EKF19128.1| succinate dehydrogenase, cytochrome b556 subunit [Nitratireductor
pacificus pht-3B]
Length = 135
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 8/105 (7%)
Query: 2 TSVLSITHRGTGVAL----TAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILA 57
T ++SI HR TG AL + LA ++ + +V+ + +L F
Sbjct: 24 TMLMSIVHRITGSALYFGIVLFVAWLAAAAISKEAFEMVNGIYGSWFGRLVL----FGFT 79
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
+ + +H G+RHL+WDTGR L A L +I+ ++L
Sbjct: 80 WALVHHMLGGLRHLVWDTGRGLEKATATKMAKATLAGSIILTVLL 124
>gi|114328744|ref|YP_745901.1| succinate dehydrogenase cytochrome b556 subunit [Granulibacter
bethesdensis CGDNIH1]
gi|114316918|gb|ABI62978.1| succinate dehydrogenase cytochrome b556 subunit [Granulibacter
bethesdensis CGDNIH1]
Length = 197
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 16/101 (15%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVG---LTTDINSVVSFVDALNLSAPILLAGK---- 53
IT LSI HR TGVA A +G LT + + + A ++ + + +G
Sbjct: 88 ITMALSILHRVTGVA--------AAIGTLLLTWWLVAAATSDHAYDIVSGFMRSGFGLLL 139
Query: 54 -FILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLG 93
F + YH NGIRHL+WD G + + Y +LG
Sbjct: 140 LFGWTVALVYHFINGIRHLVWDAGYGFDKHEANRSSYIVLG 180
>gi|258626217|ref|ZP_05721065.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio mimicus
VM603]
gi|449143819|ref|ZP_21774641.1| succinate dehydrogenase cytochrome b556 large membrane subunit
[Vibrio mimicus CAIM 602]
gi|258581572|gb|EEW06473.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio mimicus
VM603]
gi|449080535|gb|EMB51447.1| succinate dehydrogenase cytochrome b556 large membrane subunit
[Vibrio mimicus CAIM 602]
Length = 130
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 6/80 (7%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFIL---A 57
I+++ SI HR +GV +T A+G+ L+ ++S V F++A N+ L+ KF+L
Sbjct: 24 ISAIASILHRVSGV-ITFVAVGILLWLLSLSLSSPVGFMEASNIVDSFLV--KFVLWGIL 80
Query: 58 FPVSYHTANGIRHLIWDTGR 77
++YH A GIRHL+ D G
Sbjct: 81 TALAYHIAGGIRHLLMDLGH 100
>gi|126174732|ref|YP_001050881.1| succinate dehydrogenase, cytochrome subunit B [Shewanella baltica
OS155]
gi|217973009|ref|YP_002357760.1| succinate dehydrogenase, cytochrome b556 subunit [Shewanella
baltica OS223]
gi|373949849|ref|ZP_09609810.1| succinate dehydrogenase, cytochrome b556 subunit [Shewanella
baltica OS183]
gi|386324318|ref|YP_006020435.1| succinate dehydrogenase, cytochrome b556 subunit [Shewanella
baltica BA175]
gi|386341490|ref|YP_006037856.1| succinate dehydrogenase, cytochrome b556 subunit [Shewanella
baltica OS117]
gi|418024685|ref|ZP_12663667.1| succinate dehydrogenase, cytochrome b556 subunit [Shewanella
baltica OS625]
gi|125997937|gb|ABN62012.1| succinate dehydrogenase subunit C [Shewanella baltica OS155]
gi|217498144|gb|ACK46337.1| succinate dehydrogenase, cytochrome b556 subunit [Shewanella
baltica OS223]
gi|333818463|gb|AEG11129.1| succinate dehydrogenase, cytochrome b556 subunit [Shewanella
baltica BA175]
gi|334863891|gb|AEH14362.1| succinate dehydrogenase, cytochrome b556 subunit [Shewanella
baltica OS117]
gi|353535971|gb|EHC05531.1| succinate dehydrogenase, cytochrome b556 subunit [Shewanella
baltica OS625]
gi|373886449|gb|EHQ15341.1| succinate dehydrogenase, cytochrome b556 subunit [Shewanella
baltica OS183]
Length = 131
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Query: 2 TSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFIL---AF 58
T+++SI HR +GV + +A+G+ L + + S SF +L ++ KFI+
Sbjct: 26 TAIVSILHRVSGVIML-FAVGILIWLLNSSLASAESFAGVQSLFDNFVM--KFIMWGIMT 82
Query: 59 PVSYHTANGIRHLIWDTGR 77
++YH G+RHL+ DTGR
Sbjct: 83 ALAYHLFGGLRHLVMDTGR 101
>gi|444309284|ref|ZP_21144923.1| succinate dehydrogenase, cytochrome b556 subunit [Ochrobactrum
intermedium M86]
gi|443487342|gb|ELT50105.1| succinate dehydrogenase, cytochrome b556 subunit [Ochrobactrum
intermedium M86]
Length = 132
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDI-NSVVSFVDALNLSAPILLAGKFIL--- 56
IT +SI HR TG AL L LA ++ + + V+AL S G+ IL
Sbjct: 23 ITMTMSIVHRITGGALYFGTLLLAAWLISAAVSEECFNTVNALFSS----WIGRLILFGY 78
Query: 57 AFPVSYHTANGIRHLIWDTGRAL 79
+ + +H A G+RHLIWDTG L
Sbjct: 79 TWALLHHLAGGVRHLIWDTGAGL 101
>gi|156849173|ref|XP_001647467.1| hypothetical protein Kpol_1018p147 [Vanderwaltozyma polyspora DSM
70294]
gi|156118153|gb|EDO19609.1| hypothetical protein Kpol_1018p147 [Vanderwaltozyma polyspora DSM
70294]
Length = 170
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 33 NSVVSFVDALNLSAPILLAGKFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAML 92
+S ++ ++ + ++ L+ G F F + + IRH +WD G+ L++ VY +GY +
Sbjct: 101 DSFANWYNSWSSTSQSLVKGAFSYLFAFQFTLS--IRHFMWDMGKGLSLSGVYRSGYTAM 158
Query: 93 GAA 95
A
Sbjct: 159 AVA 161
>gi|239833035|ref|ZP_04681364.1| succinate dehydrogenase, cytochrome b556 subunit [Ochrobactrum
intermedium LMG 3301]
gi|239825302|gb|EEQ96870.1| succinate dehydrogenase, cytochrome b556 subunit [Ochrobactrum
intermedium LMG 3301]
Length = 152
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDI-NSVVSFVDALNLSAPILLAGKFIL--- 56
IT +SI HR TG AL L LA ++ + + V+AL S G+ IL
Sbjct: 43 ITMTMSIVHRITGGALYFGTLLLAAWLISAAVSEECFNTVNALFSS----WIGRLILFGY 98
Query: 57 AFPVSYHTANGIRHLIWDTGRAL 79
+ + +H A G+RHLIWDTG L
Sbjct: 99 TWALLHHLAGGVRHLIWDTGAGL 121
>gi|84500178|ref|ZP_00998444.1| succinate dehydrogenase, cytochrome b556 subunit [Oceanicola
batsensis HTCC2597]
gi|84392112|gb|EAQ04380.1| succinate dehydrogenase, cytochrome b556 subunit [Oceanicola
batsensis HTCC2597]
Length = 129
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 7/57 (12%)
Query: 52 GKFILAFP---VSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
G IL F + YHT G+RHLIWD G L ++ + ++G ++ VLTLL
Sbjct: 72 GDLILLFSTLGLWYHTLAGVRHLIWDNGYLLDMESSDKMSWIIIGGSV----VLTLL 124
>gi|378786340|dbj|BAL63264.1| succinate:cytochrome c oxidoreductase subunit 3 (mitochondrion)
[Pyropia tanegashimensis]
Length = 129
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 8/90 (8%)
Query: 2 TSVLSITHRGTGV----ALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFI-L 56
+S+ SI HR +GV ++++ A L T S++ F+ N +A LL+ +I L
Sbjct: 20 SSIFSIWHRISGVIMFISVSSLAFLLNQAYFTYTTVSLMKFL--FNCAAFNLLSFCYISL 77
Query: 57 AFPVS-YHTANGIRHLIWDTGRALTIKKVY 85
V YH NGIRH +WD+ + KK++
Sbjct: 78 ILTVFLYHITNGIRHFLWDSVIHVNSKKIH 107
>gi|11544909|emb|CAC17633.1| succinate dehydrogenase complex subunit C [Sus scrofa]
Length = 21
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 15/21 (71%), Positives = 17/21 (80%)
Query: 63 HTANGIRHLIWDTGRALTIKK 83
HT NGIRHLIWD G+ LTI +
Sbjct: 1 HTWNGIRHLIWDLGKGLTIPQ 21
>gi|387886262|ref|YP_006316561.1| succinate dehydrogenase, cytochrome b556 [Francisella noatunensis
subsp. orientalis str. Toba 04]
gi|386871078|gb|AFJ43085.1| succinate dehydrogenase, cytochrome b556 [Francisella noatunensis
subsp. orientalis str. Toba 04]
Length = 126
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF-- 58
IT++ SI HR +GV L +A+ LA VG+ N ++ D + +L G + F
Sbjct: 19 ITAISSILHRISGVVLI-FAIPLAVVGM----NYTLAGPDGYQQTVAVLTKGWCSIFFWL 73
Query: 59 ---PVSYHTANGIRHLIWDTGRALTIK 82
++YH G+RH+I D G ++K
Sbjct: 74 FLSSITYHVYAGVRHMIMDMGFGESMK 100
>gi|301767438|ref|XP_002919138.1| PREDICTED: LOW QUALITY PROTEIN: succinate dehydrogenase cytochrome
b560 subunit, mitochondrial-like [Ailuropoda
melanoleuca]
Length = 167
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Query: 4 VLSITHRGTGV-ALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSY 62
V H GT V + + +L L + + S + + +L L ++ K FP+ Y
Sbjct: 66 VTPTCHNGTRVVSFSRVSLWLVSLVVPRKYESHLELMKSLCLGXALIHTAKSAPIFPLMY 125
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYAML 92
HT N I L+ D+ L I ++Y +G +L
Sbjct: 126 HTCNEIGPLMRDSEEDLKITQLYQSGTVVL 155
>gi|390449712|ref|ZP_10235315.1| succinate dehydrogenase, cytochrome b556 subunit [Nitratireductor
aquibiodomus RA22]
gi|389663668|gb|EIM75187.1| succinate dehydrogenase, cytochrome b556 subunit [Nitratireductor
aquibiodomus RA22]
Length = 135
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 12/108 (11%)
Query: 2 TSVLSITHRGTGVAL----TAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILA 57
T ++SI HR TG AL + + LA + V+ + +L F
Sbjct: 24 TMLMSIVHRITGGALYFGMVLFVIWLAAAAGPKETFDTVNGIYGSWFGRLVL----FGFT 79
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
+ + +H G+RHL+WDTGR L T M A I ++VLT+L
Sbjct: 80 WAMIHHLVGGLRHLVWDTGRGLE----KATATKMAKATIAVSIVLTIL 123
>gi|89053302|ref|YP_508753.1| succinate dehydrogenase subunit C [Jannaschia sp. CCS1]
gi|88862851|gb|ABD53728.1| succinate dehydrogenase subunit C [Jannaschia sp. CCS1]
Length = 127
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTTGYAML-GAAILTNLVLTLL 105
YH G+RHLIWD G L G+ ML G+ +LT VLTL+
Sbjct: 83 YHALGGLRHLIWDAGYGLDADTSDKMGWGMLIGSVVLT--VLTLI 125
>gi|337754588|ref|YP_004647099.1| succinate dehydrogenase cytochrome b-556 subunit [Francisella sp.
TX077308]
gi|336446193|gb|AEI35499.1| Succinate dehydrogenase cytochrome b-556 subunit [Francisella sp.
TX077308]
Length = 126
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF-- 58
IT++ SI HR +GV L +A+ LA VG+ N ++ D + IL G + F
Sbjct: 19 ITAISSILHRISGVVLI-FAIPLAVVGM----NYTLAGPDGYQQTVAILTKGWCSVFFWL 73
Query: 59 ---PVSYHTANGIRHLIWDTGRALTIK 82
++YH G+RH+I D G ++K
Sbjct: 74 FLASITYHVYAGVRHMIMDLGFGESMK 100
>gi|167627193|ref|YP_001677693.1| succinate dehydrogenase, cytochrome b556 [Francisella philomiragia
subsp. philomiragia ATCC 25017]
gi|167597194|gb|ABZ87192.1| succinate dehydrogenase, cytochrome b556 [Francisella philomiragia
subsp. philomiragia ATCC 25017]
Length = 126
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF-- 58
IT++ SI HR +GV L +A+ LA VG+ N ++ D + +L G + F
Sbjct: 19 ITAISSILHRISGVVLI-FAIPLAVVGM----NYTLAGPDGYQQTVAVLTGGWCSIFFWL 73
Query: 59 ---PVSYHTANGIRHLIWDTGRALTIK 82
++YH G+RH+I D G ++K
Sbjct: 74 FLSSITYHVFAGVRHMIMDMGFGESMK 100
>gi|56695273|ref|YP_165621.1| succinate dehydrogenase, cytochrome b556 subunit [Ruegeria pomeroyi
DSS-3]
gi|56677010|gb|AAV93676.1| succinate dehydrogenase, cytochrome b556 subunit [Ruegeria pomeroyi
DSS-3]
Length = 128
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 50 LAGKFILA---FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYA-MLGAAILTNLVLTLL 105
L G ++A + + YHT GIRHLIWD L + G+A ++G+ +LT L L ++
Sbjct: 68 LIGDLVMALSLWGLWYHTLAGIRHLIWDNALGLDLPTAEKLGWAVVIGSVLLTILTLVVI 127
>gi|254876300|ref|ZP_05249010.1| succinate dehydrogenase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254842321|gb|EET20735.1| succinate dehydrogenase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 129
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF-- 58
IT++ SI HR +GV L +A+ LA VG+ N ++ D + +L G + F
Sbjct: 22 ITAISSILHRISGVVLI-FAIPLAVVGM----NYTLAGPDGYQQTVAVLTRGWCSIFFWL 76
Query: 59 ---PVSYHTANGIRHLIWDTGRALTIK 82
++YH G+RH+I D G ++K
Sbjct: 77 FLSSITYHVYAGVRHMIMDMGFGESMK 103
>gi|406707296|ref|YP_006757648.1| succinate dehydrogenase subunit C [alpha proteobacterium HIMB59]
gi|406653072|gb|AFS48471.1| succinate dehydrogenase subunit C [alpha proteobacterium HIMB59]
Length = 123
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF-P 59
+T V SITHR +G+ A +L + + + F L+ FI F
Sbjct: 17 LTMVFSITHRISGIIFAA-SLPFLAFWIGSSYFAPTLFESLSVFFNFTLIKLVFIFWFFA 75
Query: 60 VSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
+++H NG+++ +W + + + +VY Y +L + NL++T++
Sbjct: 76 LNHHLLNGLKYFLWTFAKGMELNQVYLISYCIL----IINLIMTVI 117
>gi|410078980|ref|XP_003957071.1| hypothetical protein KAFR_0D02880 [Kazachstania africana CBS 2517]
gi|372463656|emb|CCF57936.1| hypothetical protein KAFR_0D02880 [Kazachstania africana CBS 2517]
Length = 196
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 53 KFILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLG-AAILTNLVLTL 104
K A+ ++ +R+L+WD + LT+K VY TGY ++ A+ + +LTL
Sbjct: 144 KGFFAYLFAFQYGAAVRYLVWDMTKELTLKGVYRTGYGLIAFTALFGSYLLTL 196
>gi|323398684|ref|YP_004222759.1| succinate dehydrogenase subunit 3 [Glaucocystis nostochinearum]
gi|321401377|gb|ADW83131.1| succinate dehydrogenase subunit 3 [Glaucocystis nostochinearum]
Length = 142
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTTG 88
YH +GIRHL WD G+ L I K+ G
Sbjct: 87 YHIFSGIRHLYWDIGQGLKINKIILNG 113
>gi|39933296|ref|NP_945572.1| succinate dehydrogenase cytochrome b subunit [Rhodopseudomonas
palustris CGA009]
gi|192288649|ref|YP_001989254.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodopseudomonas
palustris TIE-1]
gi|39652921|emb|CAE25663.1| succinate dehydrogenase membrane anchor/cytochrome b subunit
[Rhodopseudomonas palustris CGA009]
gi|192282398|gb|ACE98778.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodopseudomonas
palustris TIE-1]
Length = 132
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 19/114 (16%)
Query: 1 ITSVLSITHRGTGVALT------AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKF 54
+T +SI HR TG+AL A+ L G T N V A S G+
Sbjct: 20 LTMTMSIVHRATGIALYSGTLLLAWWLIACAAGPTAYAN-----VQAFTGS----WIGRL 70
Query: 55 IL---AFPVSYHTANGIRHLIWDTGRAL-TIKKVYTTGYAMLGAAILTNLVLTL 104
I+ + + +H +G+RH +WD G T + + T A++G +LT L+ +
Sbjct: 71 IVFGYTWSLMHHMLSGVRHFVWDLGYGFKTADREWLTWAALIGGIVLTVLLWVI 124
>gi|314908366|gb|ADT62130.1| succinate dehydrogenase subunit 3 [Isoetes engelmannii]
Length = 98
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 1 ITSVLSITHRGTGVALTA---YALGLAGVG-LTTDINSVVSFVDALNLSAPILLAGKFIL 56
+TS SI HR +G L A ++L +G L+ SF + ILL L
Sbjct: 18 LTSTFSIFHRISGAFLAAKVLFSLLFWKIGDLSLTFYYSYSFFFFVFHWFIILLVNLTFL 77
Query: 57 AFPVSYHTANGIRHLIWDTG 76
AF YH +NG+RHL WD G
Sbjct: 78 AF--CYHMSNGVRHLWWDRG 95
>gi|259415023|ref|ZP_05738945.1| succinate dehydrogenase, cytochrome b556 subunit [Silicibacter sp.
TrichCH4B]
gi|259348933|gb|EEW60687.1| succinate dehydrogenase, cytochrome b556 subunit [Silicibacter sp.
TrichCH4B]
Length = 127
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 9/105 (8%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDI-NSVVSFVDALNLSAPILLAGKFIL--- 56
+TS+ SI R TG+A AL + L S +F+D L S G ++
Sbjct: 22 LTSMSSIMVRITGIAALGVALLVVWWLLAAATSESAFAFIDGLMRS----WLGDLVMLGA 77
Query: 57 AFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAM-LGAAILTNL 100
A+ + YH +RH++WD G L ++ G M +GA +LT L
Sbjct: 78 AWAIFYHMLGRLRHVVWDFGYCLEVETSEKLGIGMFIGATVLTVL 122
>gi|242238586|ref|YP_002986767.1| succinate dehydrogenase, cytochrome b556 subunit [Dickeya dadantii
Ech703]
gi|242130643|gb|ACS84945.1| succinate dehydrogenase, cytochrome b556 subunit [Dickeya dadantii
Ech703]
Length = 129
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 17/112 (15%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPV 60
+T++ SI HR +GV +T A+G+ L ++S FV A A I+ G FI+ F V
Sbjct: 22 VTAIASILHRVSGV-ITFVAVGILLWLLGLSLSSQEGFVHA----AAIM--GSFIVKFIV 74
Query: 61 -------SYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
SYH G+RHL+ D G I++ + G + + + +VL+LL
Sbjct: 75 WGILTALSYHIVGGLRHLLMDFGY---IEETFAAGSSSAKISFIITVVLSLL 123
>gi|336311214|ref|ZP_08566180.1| succinate dehydrogenase cytochrome b-556 subunit [Shewanella sp.
HN-41]
gi|335865268|gb|EGM70301.1| succinate dehydrogenase cytochrome b-556 subunit [Shewanella sp.
HN-41]
Length = 131
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Query: 2 TSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILA---F 58
T+++SI HR +GV + +A+G+ L + + S SF +L ++ KFI+
Sbjct: 26 TAIVSILHRVSGVIML-FAVGILIWLLNSSLASAESFAGVQSLFDNFVV--KFIMWGILT 82
Query: 59 PVSYHTANGIRHLIWDTGR 77
++YH G+RHL+ DTGR
Sbjct: 83 ALAYHLFGGLRHLVMDTGR 101
>gi|113969971|ref|YP_733764.1| succinate dehydrogenase subunit C [Shewanella sp. MR-4]
gi|114047206|ref|YP_737756.1| succinate dehydrogenase subunit C [Shewanella sp. MR-7]
gi|117920153|ref|YP_869345.1| succinate dehydrogenase subunit C [Shewanella sp. ANA-3]
gi|113884655|gb|ABI38707.1| succinate dehydrogenase subunit C [Shewanella sp. MR-4]
gi|113888648|gb|ABI42699.1| succinate dehydrogenase subunit C [Shewanella sp. MR-7]
gi|117612485|gb|ABK47939.1| succinate dehydrogenase subunit C [Shewanella sp. ANA-3]
Length = 131
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Query: 2 TSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILA---F 58
T+++SI HR +GV + +A+G+ L + + S SF +L ++ KFI+
Sbjct: 26 TAIVSILHRVSGVIML-FAVGILIWLLNSSLASAESFAGVQSLFDNFVV--KFIMWGILT 82
Query: 59 PVSYHTANGIRHLIWDTGR 77
++YH G+RHL+ DTGR
Sbjct: 83 ALAYHLFGGLRHLVMDTGR 101
>gi|410636491|ref|ZP_11347085.1| succinate dehydrogenase cytochrome b556 subunit [Glaciecola
lipolytica E3]
gi|410144103|dbj|GAC14290.1| succinate dehydrogenase cytochrome b556 subunit [Glaciecola
lipolytica E3]
Length = 124
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Query: 2 TSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVS 61
++++SI HR TGVA+ +AL ++S+ F + A L GKF+ +S
Sbjct: 19 SAIVSILHRITGVAMF-FALIFVIWAWAVSVSSLDGFNTVKEVMAGPL--GKFVAIGTLS 75
Query: 62 ---YHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
YH GIRH+I D G I+ + A +G IL +V+
Sbjct: 76 ALTYHILGGIRHVIMDMGHWEEIQSGNVSAQATIGLWILATIVI 119
>gi|149911925|ref|ZP_01900524.1| succinate dehydrogenase, cytochrome b556 subunit [Moritella sp.
PE36]
gi|149805018|gb|EDM65046.1| succinate dehydrogenase, cytochrome b556 subunit [Moritella sp.
PE36]
Length = 128
Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILA--- 57
IT++ SI HR +GV + +A+G+ L ++S F +A + + G FIL
Sbjct: 22 ITAIASILHRISGVIML-FAVGILLWLLAESLSSEQGFQNAQEIVSGFF--GTFILWGIL 78
Query: 58 FPVSYHTANGIRHLIWDTG 76
++YH A GIRHL+ D G
Sbjct: 79 TALAYHIAGGIRHLLMDMG 97
>gi|409439375|ref|ZP_11266424.1| Succinate dehydrogenase cytochrome b556 subunit [Rhizobium
mesoamericanum STM3625]
gi|408748751|emb|CCM77605.1| Succinate dehydrogenase cytochrome b556 subunit [Rhizobium
mesoamericanum STM3625]
Length = 109
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 57/113 (50%), Gaps = 26/113 (23%)
Query: 4 VLSITHRGTGVAL------TAYALGLAGVGLTTDINSVVSFVDALNLSAPIL--LAGKFI 55
V+SI HR TG AL A+ L A G ++ D +N IL + GK +
Sbjct: 2 VMSIVHRITGSALYFGTLLVAWWLIAAATG--------QAYYDWVN---WILGSIVGKLV 50
Query: 56 L---AFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
L + + +H G+RHL+WD GR +K ++T A+ A I+ +L LT+L
Sbjct: 51 LLGYTWALLHHMLGGLRHLMWDLGRGF--EKEFSTKLAI--ANIIGSLCLTVL 99
>gi|365884956|ref|ZP_09423982.1| Succinate dehydrogenase cytochrome b556 subunit [Bradyrhizobium sp.
ORS 375]
gi|365286504|emb|CCD96513.1| Succinate dehydrogenase cytochrome b556 subunit [Bradyrhizobium sp.
ORS 375]
Length = 132
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 19/111 (17%)
Query: 1 ITSVLSITHRGTGVALT------AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKF 54
+T +LSI HR TGVAL A+ L A G S S+V S G+
Sbjct: 20 LTMILSIVHRATGVALYFGTLLLAWWLIAAASG-----PSAYSYVQGFMAS----FLGRL 70
Query: 55 IL---AFPVSYHTANGIRHLIWDTGRALTIKKVYTTGY-AMLGAAILTNLV 101
I+ + + +H +GIRH +WD G + T + A++G LT LV
Sbjct: 71 IVFGYTWALLHHLLSGIRHFVWDLGYGFKPNERETLTWGALIGGISLTVLV 121
>gi|126734839|ref|ZP_01750585.1| succinate dehydrogenase, cytochrome b556 subunit [Roseobacter sp.
CCS2]
gi|126715394|gb|EBA12259.1| succinate dehydrogenase, cytochrome b556 subunit [Roseobacter sp.
CCS2]
Length = 127
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 62 YHTANGIRHLIWDTGRALTIKK 83
YH G+RHL+WD+GR L + K
Sbjct: 83 YHLLGGLRHLVWDSGRMLDVDK 104
>gi|378786323|dbj|BAL63253.1| succinate:cytochrome c oxidoreductase subunit 3 (mitochondrion)
[Pyropia lacerata]
Length = 129
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 2 TSVLSITHRGTGVA---LTAYALGLAGVGLTTDINSVVSF-VDALNLSAPILLAGKFILA 57
+S+ SI HR +G L + + L + + SF + NL + + + + +++
Sbjct: 20 SSIFSIWHRISGFVMFILISSPILLLNCSYFSYTPTFFSFFLLEYNLYSWLFTSFRLVIS 79
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVY 85
YH +NG+RH +WD+ + K++Y
Sbjct: 80 SIFLYHISNGVRHFLWDSVGHVNTKEIY 107
>gi|160875744|ref|YP_001555060.1| succinate dehydrogenase, cytochrome b556 subunit [Shewanella
baltica OS195]
gi|378708944|ref|YP_005273838.1| succinate dehydrogenase, cytochrome b556 subunit [Shewanella
baltica OS678]
gi|160861266|gb|ABX49800.1| succinate dehydrogenase, cytochrome b556 subunit [Shewanella
baltica OS195]
gi|315267933|gb|ADT94786.1| succinate dehydrogenase, cytochrome b556 subunit [Shewanella
baltica OS678]
Length = 131
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 2 TSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFIL---AF 58
T++ SI HR +GV + +A+G+ L + + S SF +L ++ KFI+
Sbjct: 26 TAIASILHRVSGVIML-FAVGILIWLLNSSLASAESFAGVQSLFDNFVM--KFIMWGIMT 82
Query: 59 PVSYHTANGIRHLIWDTGR 77
++YH G+RHL+ DTGR
Sbjct: 83 ALAYHLFGGLRHLVMDTGR 101
>gi|456351818|dbj|BAM86263.1| succinate dehydrogenase cytochrome b556 subunit [Agromonas
oligotrophica S58]
Length = 132
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDIN-SVVSFVDALNLSAPILLAGKFIL--- 56
+T +LSI HR TGVAL L LA + S S+V S G+ I+
Sbjct: 20 LTMILSIVHRATGVALYFGTLLLAWWLIAAASGPSAYSYVQGFMGS----FLGRLIVFGY 75
Query: 57 AFPVSYHTANGIRHLIWDTGRALTI--KKVYTTGYAMLGAAILTNLV 101
+ + +H +GIRH +WD G ++ T G A++G LT LV
Sbjct: 76 TWALLHHLLSGIRHFVWDLGYGFKANEREALTWG-ALIGGIFLTVLV 121
>gi|325920388|ref|ZP_08182319.1| succinate dehydrogenase subunit C [Xanthomonas gardneri ATCC 19865]
gi|325549135|gb|EGD20058.1| succinate dehydrogenase subunit C [Xanthomonas gardneri ATCC 19865]
Length = 130
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 40/90 (44%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPV 60
I V SI HR TG+ L+ AL +A L + L A F +
Sbjct: 19 IQMVTSILHRATGIILSGGALVIAAALLVLMLGQDHWTCLTQQLGAWYGQLFLFGWTWAF 78
Query: 61 SYHTANGIRHLIWDTGRALTIKKVYTTGYA 90
+YH +NGIRH++ D G +I +G+A
Sbjct: 79 AYHLSNGIRHIVQDFGYGYSIPAFVRSGWA 108
>gi|85714477|ref|ZP_01045465.1| succinate dehydrogenase, cytochrome b subunit [Nitrobacter sp.
Nb-311A]
gi|85698924|gb|EAQ36793.1| succinate dehydrogenase, cytochrome b subunit [Nitrobacter sp.
Nb-311A]
Length = 133
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 23/113 (20%)
Query: 1 ITSVLSITHRGTGVALTAYALGL--------AGVGLTTDINSVVSFVDALNLSAPILLAG 52
+T LSI HR TGVAL L L +G G + S S AG
Sbjct: 20 LTMALSIVHRATGVALYFGTLLLVWWLMAVSSGPGAYAAVQSFTSS-----------WAG 68
Query: 53 KFI---LAFPVSYHTANGIRHLIWDTGRALT-IKKVYTTGYAMLGAAILTNLV 101
+ I + + +H +G+RHL+WD G ++ + T A++G +LT L+
Sbjct: 69 RLIAFGYTWALMHHMLSGVRHLVWDLGYGFKPTEREWLTRAALIGGILLTVLL 121
>gi|315497255|ref|YP_004086059.1| succinate dehydrogenase, cytochrome b556 subunit [Asticcacaulis
excentricus CB 48]
gi|315415267|gb|ADU11908.1| succinate dehydrogenase, cytochrome b556 subunit [Asticcacaulis
excentricus CB 48]
Length = 143
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 47/104 (45%), Gaps = 6/104 (5%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAG----VGLTTDINSVVSFVDALNLSA-PILLAGKFI 55
IT SI HR TG+A A+ +A +GLT + ++ L+ +A P L F
Sbjct: 25 ITMFTSILHRATGIASVVGAVMVAAWLLAIGLTASGHCPEAYTLFLSFAASPFGLFVWFG 84
Query: 56 LAFPVSYHTANGIRHLIWDTGRALTIKKVYT-TGYAMLGAAILT 98
L H G+RHLIWD G I +++LG LT
Sbjct: 85 LTLAGFIHLTGGLRHLIWDMGLGFKISSANALAWWSLLGGIALT 128
>gi|424613904|ref|ZP_18052692.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae
HC-41A1]
gi|408012461|gb|EKG50239.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae
HC-41A1]
Length = 114
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILA--- 57
I+++ SI HR +GV +T A+G+ L+ ++S V F++A N+ + KF+L
Sbjct: 8 ISAIASILHRVSGV-ITFVAVGILLWLLSLSLSSPVGFMEASNIVDSFFV--KFVLWGIL 64
Query: 58 FPVSYHTANGIRHLIWDTGR 77
++YH A GIRHL+ D G
Sbjct: 65 TALAYHIAGGIRHLLMDLGH 84
>gi|422917940|ref|ZP_16952258.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae
HC-02A1]
gi|341636822|gb|EGS61516.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae
HC-02A1]
Length = 114
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILA--- 57
I+++ SI HR +GV +T A+G+ L+ ++S V F++A N+ + KF+L
Sbjct: 8 ISAIASILHRVSGV-ITFVAVGILLWLLSLSLSSPVGFMEASNIVDSFFV--KFVLWGIL 64
Query: 58 FPVSYHTANGIRHLIWDTGR 77
++YH A GIRHL+ D G
Sbjct: 65 TALAYHIAGGIRHLLMDLGH 84
>gi|406936897|gb|EKD70514.1| hypothetical protein ACD_46C00514G0004 [uncultured bacterium]
Length = 123
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 1 ITSVLSITHRGTGVAL---TAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILA 57
+ +++SI HR +G AL L L LT+D + L L +P+L +IL
Sbjct: 18 LPAIISILHRVSGAALFILIPAILWLLDYSLTSDGYDDIQ----LWLESPMLKFIFWILL 73
Query: 58 FPVSYHTANGIRHLIWDTGRALTIK 82
P YH G+RHL+ D T+K
Sbjct: 74 IPFCYHLVAGVRHLLSDIHIGDTLK 98
>gi|17986443|ref|NP_539077.1| succinate dehydrogenase cytochrome B-556 subunit [Brucella
melitensis bv. 1 str. 16M]
gi|23502755|ref|NP_698882.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella suis
1330]
gi|62290760|ref|YP_222553.1| SdhC, succinate dehydrogenase, cytochrome b556 subunit [Brucella
abortus bv. 1 str. 9-941]
gi|82700671|ref|YP_415245.1| succinate dehydrogenase, cytochrome subunit B [Brucella melitensis
biovar Abortus 2308]
gi|161619821|ref|YP_001593708.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella canis
ATCC 23365]
gi|163843927|ref|YP_001628331.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella suis
ATCC 23445]
gi|225853341|ref|YP_002733574.1| succinate dehydrogenase cytochrome b556 subunit [Brucella
melitensis ATCC 23457]
gi|256370306|ref|YP_003107817.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella microti
CCM 4915]
gi|294851145|ref|ZP_06791818.1| succinate dehydrogenase [Brucella sp. NVSL 07-0026]
gi|306838923|ref|ZP_07471750.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella sp. NF
2653]
gi|306842942|ref|ZP_07475576.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella sp. BO2]
gi|306843359|ref|ZP_07475960.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella
inopinata BO1]
gi|340791493|ref|YP_004756958.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella
pinnipedialis B2/94]
gi|376272376|ref|YP_005150954.1| succinate dehydrogenase cytochrome b556 subunit [Brucella abortus
A13334]
gi|376275502|ref|YP_005115941.1| succinate dehydrogenase cytochrome b556 subunit [Brucella canis HSK
A52141]
gi|376281550|ref|YP_005155556.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella suis
VBI22]
gi|384212253|ref|YP_005601337.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella
melitensis M5-90]
gi|384225542|ref|YP_005616706.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella suis
1330]
gi|384409358|ref|YP_005597979.1| succinate dehydrogenase cytochrome b556 subunit [Brucella
melitensis M28]
gi|384445897|ref|YP_005604616.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella
melitensis NI]
gi|423168119|ref|ZP_17154822.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella abortus
bv. 1 str. NI435a]
gi|423169505|ref|ZP_17156180.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella abortus
bv. 1 str. NI474]
gi|423175505|ref|ZP_17162174.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella abortus
bv. 1 str. NI486]
gi|423177645|ref|ZP_17164290.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella abortus
bv. 1 str. NI488]
gi|423178938|ref|ZP_17165579.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella abortus
bv. 1 str. NI010]
gi|423182069|ref|ZP_17168706.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella abortus
bv. 1 str. NI016]
gi|423186989|ref|ZP_17173603.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella abortus
bv. 1 str. NI021]
gi|423190575|ref|ZP_17177183.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella abortus
bv. 1 str. NI259]
gi|17982039|gb|AAL51341.1| succinate dehydrogenase cytochrome b-556 subunit [Brucella
melitensis bv. 1 str. 16M]
gi|23348773|gb|AAN30797.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella suis
1330]
gi|62196892|gb|AAX75192.1| SdhC, succinate dehydrogenase, cytochrome b556 subunit [Brucella
abortus bv. 1 str. 9-941]
gi|82616772|emb|CAJ11859.1| Succinate dehydrogenase, cytochrome b subunit [Brucella melitensis
biovar Abortus 2308]
gi|161336632|gb|ABX62937.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella canis
ATCC 23365]
gi|163674650|gb|ABY38761.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella suis
ATCC 23445]
gi|225641706|gb|ACO01620.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella
melitensis ATCC 23457]
gi|256000469|gb|ACU48868.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella microti
CCM 4915]
gi|294819734|gb|EFG36733.1| succinate dehydrogenase [Brucella sp. NVSL 07-0026]
gi|306276050|gb|EFM57750.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella
inopinata BO1]
gi|306286870|gb|EFM58395.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella sp. BO2]
gi|306405993|gb|EFM62245.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella sp. NF
2653]
gi|326409905|gb|ADZ66970.1| succinate dehydrogenase cytochrome b556 subunit [Brucella
melitensis M28]
gi|326539618|gb|ADZ87833.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella
melitensis M5-90]
gi|340559952|gb|AEK55190.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella
pinnipedialis B2/94]
gi|343383722|gb|AEM19214.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella suis
1330]
gi|349743886|gb|AEQ09429.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella
melitensis NI]
gi|358259149|gb|AEU06884.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella suis
VBI22]
gi|363399982|gb|AEW16952.1| succinate dehydrogenase cytochrome b556 subunit [Brucella abortus
A13334]
gi|363404069|gb|AEW14364.1| succinate dehydrogenase cytochrome b556 subunit [Brucella canis HSK
A52141]
gi|374535949|gb|EHR07470.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella abortus
bv. 1 str. NI486]
gi|374539868|gb|EHR11371.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella abortus
bv. 1 str. NI435a]
gi|374543184|gb|EHR14667.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella abortus
bv. 1 str. NI474]
gi|374549233|gb|EHR20677.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella abortus
bv. 1 str. NI488]
gi|374551882|gb|EHR23311.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella abortus
bv. 1 str. NI016]
gi|374552254|gb|EHR23682.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella abortus
bv. 1 str. NI010]
gi|374554345|gb|EHR25756.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella abortus
bv. 1 str. NI259]
gi|374557701|gb|EHR29097.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella abortus
bv. 1 str. NI021]
Length = 132
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSF--VDALNLSAPILLAGKFIL-- 56
IT +SI HR TG AL L LA L + S F ++AL S G+ IL
Sbjct: 23 ITMTMSIVHRITGGALYFGTLLLAA-WLISAATSEECFNTINALFSS----WIGRLILFG 77
Query: 57 -AFPVSYHTANGIRHLIWDTGRAL 79
+ + +H A G+RH IWDTG A+
Sbjct: 78 YTWALLHHLAGGVRHFIWDTGAAM 101
>gi|114769286|ref|ZP_01446912.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodobacterales
bacterium HTCC2255]
gi|114550203|gb|EAU53084.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodobacterales
bacterium HTCC2255]
Length = 131
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGY-AMLGAAILTNLVL 102
+ + YH+ GIRHLIWD G +K G+ ++G+ +LT V+
Sbjct: 79 WALCYHSLGGIRHLIWDMGFGFDLKIADRLGWMVIIGSFVLTIFVV 124
>gi|58578853|ref|YP_197065.1| succinate dehydrogenase cytochrome B-556 subunit [Ehrlichia
ruminantium str. Welgevonden]
gi|58417479|emb|CAI26683.1| Succinate dehydrogenase cytochrome B-556 subunit [Ehrlichia
ruminantium str. Welgevonden]
Length = 143
Score = 35.8 bits (81), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPIL-LAGKFILAFP 59
+++VLSITHR TG+ L L LA + I + L S L G + F
Sbjct: 29 MSAVLSITHRFTGILLFIGLLLLAWTFIACAIYPELIHKAYLFFSTSYFALYGFKLFIFV 88
Query: 60 ----VSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLV 101
+ YH NG+RH++WD G LT V +G +L ++L + +
Sbjct: 89 CLNVLCYHYLNGVRHILWDFGLGLTKSAVKISGIVVLVLSLLFSFI 134
>gi|213018855|ref|ZP_03334663.1| succinate dehydrogenase, cytochrome b556 subunit [Wolbachia
endosymbiont of Culex quinquefasciatus JHB]
gi|212995806|gb|EEB56446.1| succinate dehydrogenase, cytochrome b556 subunit [Wolbachia
endosymbiont of Culex quinquefasciatus JHB]
Length = 45
Score = 35.8 bits (81), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 7/43 (16%)
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTL 104
YH NGIRHL+WD G L I V L +AIL ++L L
Sbjct: 2 YHFLNGIRHLLWDAGLNLEIASV-------LKSAILLTIMLFL 37
>gi|261220959|ref|ZP_05935240.1| succinate dehydrogenase cytochrome b556 subunit [Brucella ceti
B1/94]
gi|265996918|ref|ZP_06109475.1| succinate dehydrogenase cytochrome b556 subunit [Brucella ceti
M490/95/1]
gi|260919543|gb|EEX86196.1| succinate dehydrogenase cytochrome b556 subunit [Brucella ceti
B1/94]
gi|262551386|gb|EEZ07376.1| succinate dehydrogenase cytochrome b556 subunit [Brucella ceti
M490/95/1]
Length = 142
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSF--VDALNLSAPILLAGKFIL-- 56
IT +SI HR TG AL L LA L + S F ++AL S G+ IL
Sbjct: 33 ITMTMSIVHRITGGALYFGTLLLAA-WLISAATSEECFNTINALFSS----WIGRLILFG 87
Query: 57 -AFPVSYHTANGIRHLIWDTGRAL 79
+ + +H A G+RH IWDTG A+
Sbjct: 88 YTWALLHHLAGGVRHFIWDTGAAM 111
>gi|313768525|ref|YP_004062200.1| sdhC gene product (mitochondrion) [Gracilariopsis andersonii]
gi|312844652|gb|ADR03216.1| SdhC (mitochondrion) [Gracilariopsis andersonii]
Length = 126
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 16/92 (17%)
Query: 1 ITSVLSITHRGTGVALT---AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILA 57
++S+ SI HR +G+ LT + L + + L + D LN S I L F L
Sbjct: 17 VSSLFSIWHRISGIFLTFLIVFYLISSQLFLHITYSK-----DVLN-SLIIQLEYSFFLQ 70
Query: 58 FP-------VSYHTANGIRHLIWDTGRALTIK 82
F YH NG++H+IWD G T K
Sbjct: 71 FIYILNTSIFFYHAINGVKHIIWDLGFFPTPK 102
>gi|153213690|ref|ZP_01948942.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae
1587]
gi|153801967|ref|ZP_01956553.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae
MZO-3]
gi|153826059|ref|ZP_01978726.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae
MZO-2]
gi|153831292|ref|ZP_01983959.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae
623-39]
gi|229513746|ref|ZP_04403208.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio cholerae
TMA 21]
gi|229522048|ref|ZP_04411465.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio cholerae
TM 11079-80]
gi|229524097|ref|ZP_04413502.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio cholerae
bv. albensis VL426]
gi|229528893|ref|ZP_04418283.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio cholerae
12129(1)]
gi|254286792|ref|ZP_04961745.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae
AM-19226]
gi|262190295|ref|ZP_06048563.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio cholerae
CT 5369-93]
gi|297579595|ref|ZP_06941523.1| succinate dehydrogenase cytochrome b556 large membrane subunit
[Vibrio cholerae RC385]
gi|124115751|gb|EAY34571.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae
1587]
gi|124122481|gb|EAY41224.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae
MZO-3]
gi|148873223|gb|EDL71358.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae
623-39]
gi|149740176|gb|EDM54329.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae
MZO-2]
gi|150423083|gb|EDN15031.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae
AM-19226]
gi|229332667|gb|EEN98153.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio cholerae
12129(1)]
gi|229337678|gb|EEO02695.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio cholerae
bv. albensis VL426]
gi|229340973|gb|EEO05978.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio cholerae
TM 11079-80]
gi|229348927|gb|EEO13884.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio cholerae
TMA 21]
gi|262033824|gb|EEY52296.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio cholerae
CT 5369-93]
gi|297537189|gb|EFH76022.1| succinate dehydrogenase cytochrome b556 large membrane subunit
[Vibrio cholerae RC385]
Length = 130
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFIL---A 57
I+++ SI HR +GV +T A+G+ L+ ++S V F++A N+ + KF+L
Sbjct: 24 ISAIASILHRVSGV-ITFVAVGILLWLLSLSLSSPVGFMEASNIVDSFFV--KFVLWGIL 80
Query: 58 FPVSYHTANGIRHLIWDTG 76
++YH A GIRHL+ D G
Sbjct: 81 TALAYHIAGGIRHLLMDLG 99
>gi|407070795|ref|ZP_11101633.1| succinate dehydrogenase cytochrome b556 large membrane subunit
[Vibrio cyclitrophicus ZF14]
Length = 130
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 6/80 (7%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFIL---A 57
IT++ SI HR +GV +T A+G+ L+T ++S V F++A ++ + KFIL
Sbjct: 24 ITAIASILHRVSGV-ITFVAIGILLWLLSTSLSSPVGFMEASDIVDGFFV--KFILWGIL 80
Query: 58 FPVSYHTANGIRHLIWDTGR 77
++YH A GIRHL+ D G
Sbjct: 81 TALAYHIAGGIRHLLMDLGH 100
>gi|365892136|ref|ZP_09430469.1| Succinate dehydrogenase cytochrome b556 subunit [Bradyrhizobium sp.
STM 3809]
gi|365331855|emb|CCE03000.1| Succinate dehydrogenase cytochrome b556 subunit [Bradyrhizobium sp.
STM 3809]
Length = 132
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 19/111 (17%)
Query: 1 ITSVLSITHRGTGVALT------AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKF 54
+T +LSI HR TGVAL A+ L A G S S+V S G+
Sbjct: 20 LTMILSIVHRATGVALYFGTLLLAWWLIAAASG-----PSAYSYVQGFMGS----FLGRL 70
Query: 55 IL---AFPVSYHTANGIRHLIWDTGRALTIKKVYTTGY-AMLGAAILTNLV 101
I+ + + +H +GIRH +WD G + T + A++G LT LV
Sbjct: 71 IVFGYTWALLHHLLSGIRHFVWDLGYGFKPNERETLTWGALIGGITLTVLV 121
>gi|357025757|ref|ZP_09087870.1| succinate dehydrogenase membrane anchor subunit [Mesorhizobium
amorphae CCNWGS0123]
gi|355542355|gb|EHH11518.1| succinate dehydrogenase membrane anchor subunit [Mesorhizobium
amorphae CCNWGS0123]
Length = 139
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFIL---A 57
IT +SI HR TG AL L L + L ++ +F D +N + L G+ +L
Sbjct: 28 ITMTMSIIHRITGGALYFGTL-LVALWLMAAASTEATF-DLVNWAFGSWL-GRLVLFGYT 84
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
+ + +H G+RHL+WDTG L +A L +I L++
Sbjct: 85 WALVHHMLGGVRHLVWDTGAGLEKHTASKIAWATLAGSIALTLLI 129
>gi|260546025|ref|ZP_05821765.1| succinate dehydrogenase [Brucella abortus NCTC 8038]
gi|260562821|ref|ZP_05833307.1| succinate dehydrogenase [Brucella melitensis bv. 1 str. 16M]
gi|260567607|ref|ZP_05838077.1| succinate dehydrogenase [Brucella suis bv. 4 str. 40]
gi|260755583|ref|ZP_05867931.1| succinate dehydrogenase cytochrome b556 subunit [Brucella abortus
bv. 6 str. 870]
gi|260758809|ref|ZP_05871157.1| succinate dehydrogenase cytochrome b556 subunit [Brucella abortus
bv. 4 str. 292]
gi|260760533|ref|ZP_05872876.1| succinate dehydrogenase cytochrome b556 subunit [Brucella abortus
bv. 2 str. 86/8/59]
gi|260884609|ref|ZP_05896223.1| succinate dehydrogenase cytochrome b556 subunit [Brucella abortus
bv. 9 str. C68]
gi|261214856|ref|ZP_05929137.1| succinate dehydrogenase cytochrome b556 subunit [Brucella abortus
bv. 3 str. Tulya]
gi|261217733|ref|ZP_05932014.1| succinate dehydrogenase cytochrome b556 subunit [Brucella ceti
M13/05/1]
gi|261315053|ref|ZP_05954250.1| succinate dehydrogenase cytochrome b556 subunit [Brucella
pinnipedialis M163/99/10]
gi|261316390|ref|ZP_05955587.1| succinate dehydrogenase cytochrome b556 subunit [Brucella
pinnipedialis B2/94]
gi|261321419|ref|ZP_05960616.1| succinate dehydrogenase cytochrome b556 subunit [Brucella ceti
M644/93/1]
gi|261751052|ref|ZP_05994761.1| succinate dehydrogenase cytochrome b556 subunit [Brucella suis bv.
5 str. 513]
gi|261755614|ref|ZP_05999323.1| succinate dehydrogenase cytochrome b556 subunit [Brucella suis bv.
3 str. 686]
gi|261758847|ref|ZP_06002556.1| succinate dehydrogenase [Brucella sp. F5/99]
gi|265982914|ref|ZP_06095649.1| succinate dehydrogenase cytochrome b556 subunit [Brucella sp.
83/13]
gi|265987463|ref|ZP_06100020.1| succinate dehydrogenase cytochrome b556 subunit [Brucella
pinnipedialis M292/94/1]
gi|265991935|ref|ZP_06104492.1| succinate dehydrogenase cytochrome b556 subunit [Brucella
melitensis bv. 1 str. Rev.1]
gi|265993667|ref|ZP_06106224.1| succinate dehydrogenase cytochrome b556 subunit [Brucella
melitensis bv. 3 str. Ether]
gi|265999292|ref|ZP_05465704.2| succinate dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
gi|260096132|gb|EEW80008.1| succinate dehydrogenase [Brucella abortus NCTC 8038]
gi|260152837|gb|EEW87929.1| succinate dehydrogenase [Brucella melitensis bv. 1 str. 16M]
gi|260157125|gb|EEW92205.1| succinate dehydrogenase [Brucella suis bv. 4 str. 40]
gi|260669127|gb|EEX56067.1| succinate dehydrogenase cytochrome b556 subunit [Brucella abortus
bv. 4 str. 292]
gi|260670965|gb|EEX57786.1| succinate dehydrogenase cytochrome b556 subunit [Brucella abortus
bv. 2 str. 86/8/59]
gi|260675691|gb|EEX62512.1| succinate dehydrogenase cytochrome b556 subunit [Brucella abortus
bv. 6 str. 870]
gi|260874137|gb|EEX81206.1| succinate dehydrogenase cytochrome b556 subunit [Brucella abortus
bv. 9 str. C68]
gi|260916463|gb|EEX83324.1| succinate dehydrogenase cytochrome b556 subunit [Brucella abortus
bv. 3 str. Tulya]
gi|260922822|gb|EEX89390.1| succinate dehydrogenase cytochrome b556 subunit [Brucella ceti
M13/05/1]
gi|261294109|gb|EEX97605.1| succinate dehydrogenase cytochrome b556 subunit [Brucella ceti
M644/93/1]
gi|261295613|gb|EEX99109.1| succinate dehydrogenase cytochrome b556 subunit [Brucella
pinnipedialis B2/94]
gi|261304079|gb|EEY07576.1| succinate dehydrogenase cytochrome b556 subunit [Brucella
pinnipedialis M163/99/10]
gi|261738831|gb|EEY26827.1| succinate dehydrogenase [Brucella sp. F5/99]
gi|261740805|gb|EEY28731.1| succinate dehydrogenase cytochrome b556 subunit [Brucella suis bv.
5 str. 513]
gi|261745367|gb|EEY33293.1| succinate dehydrogenase cytochrome b556 subunit [Brucella suis bv.
3 str. 686]
gi|262764648|gb|EEZ10569.1| succinate dehydrogenase cytochrome b556 subunit [Brucella
melitensis bv. 3 str. Ether]
gi|263003001|gb|EEZ15294.1| succinate dehydrogenase cytochrome b556 subunit [Brucella
melitensis bv. 1 str. Rev.1]
gi|263093078|gb|EEZ17228.1| succinate dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
gi|264659660|gb|EEZ29921.1| succinate dehydrogenase cytochrome b556 subunit [Brucella
pinnipedialis M292/94/1]
gi|264661506|gb|EEZ31767.1| succinate dehydrogenase cytochrome b556 subunit [Brucella sp.
83/13]
Length = 142
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSF--VDALNLSAPILLAGKFIL-- 56
IT +SI HR TG AL L LA L + S F ++AL S G+ IL
Sbjct: 33 ITMTMSIVHRITGGALYFGTLLLAA-WLISAATSEECFNTINALFSS----WIGRLILFG 87
Query: 57 -AFPVSYHTANGIRHLIWDTGRAL 79
+ + +H A G+RH IWDTG A+
Sbjct: 88 YTWALLHHLAGGVRHFIWDTGAAM 111
>gi|163761421|ref|ZP_02168495.1| putative succinate dehydrogenase cytochrome b556 subunit [Hoeflea
phototrophica DFL-43]
gi|162281416|gb|EDQ31713.1| putative succinate dehydrogenase cytochrome b556 subunit [Hoeflea
phototrophica DFL-43]
Length = 163
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 2 TSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFIL---AF 58
T V+SI HR TG+AL A + +A + S + D +N LL G+ +L +
Sbjct: 54 TMVMSILHRLTGMALYAGTILVAWWLIAA--ASGPEYFDWVNGIFGSLL-GRLVLFGYTW 110
Query: 59 PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAML-GAAILTNLV 101
+ +H GIRH IWDTG + +A + G+ ILT L+
Sbjct: 111 ALVHHLLGGIRHFIWDTGHGFDPQTSTKMAWATITGSVILTVLI 154
>gi|15642091|ref|NP_231723.1| succinate dehydrogenase cytochrome b556 large membrane subunit
[Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121586919|ref|ZP_01676699.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae
2740-80]
gi|121727359|ref|ZP_01680498.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae
V52]
gi|147673409|ref|YP_001217616.1| succinate dehydrogenase cytochrome b556 large membrane subunit
[Vibrio cholerae O395]
gi|153818384|ref|ZP_01971051.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae
NCTC 8457]
gi|153821711|ref|ZP_01974378.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae
B33]
gi|227082217|ref|YP_002810768.1| succinate dehydrogenase cytochrome b556 large membrane subunit
[Vibrio cholerae M66-2]
gi|227118538|ref|YP_002820434.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae
O395]
gi|229507820|ref|ZP_04397325.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio cholerae
BX 330286]
gi|229511943|ref|ZP_04401422.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio cholerae
B33]
gi|229519079|ref|ZP_04408522.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio cholerae
RC9]
gi|229607365|ref|YP_002878013.1| succinate dehydrogenase cytochrome b556 large membrane subunit
[Vibrio cholerae MJ-1236]
gi|254849177|ref|ZP_05238527.1| succinate dehydrogenase cytochrome b556 large membrane subunit
[Vibrio cholerae MO10]
gi|298497883|ref|ZP_07007690.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae
MAK 757]
gi|360035973|ref|YP_004937736.1| succinate dehydrogenase cytochrome b556 large membrane subunit
[Vibrio cholerae O1 str. 2010EL-1786]
gi|379741913|ref|YP_005333882.1| succinate dehydrogenase cytochrome b556 large membrane subunit
[Vibrio cholerae IEC224]
gi|9656640|gb|AAF95237.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae
O1 biovar El Tor str. N16961]
gi|121548855|gb|EAX58898.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae
2740-80]
gi|121630251|gb|EAX62649.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae
V52]
gi|126511074|gb|EAZ73668.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae
NCTC 8457]
gi|126520809|gb|EAZ78032.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae
B33]
gi|146315292|gb|ABQ19831.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae
O395]
gi|227010105|gb|ACP06317.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae
M66-2]
gi|227013988|gb|ACP10198.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae
O395]
gi|229343768|gb|EEO08743.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio cholerae
RC9]
gi|229351908|gb|EEO16849.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio cholerae
B33]
gi|229355325|gb|EEO20246.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio cholerae
BX 330286]
gi|229370020|gb|ACQ60443.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio cholerae
MJ-1236]
gi|254844882|gb|EET23296.1| succinate dehydrogenase cytochrome b556 large membrane subunit
[Vibrio cholerae MO10]
gi|297542216|gb|EFH78266.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae
MAK 757]
gi|356647127|gb|AET27182.1| succinate dehydrogenase cytochrome b556 large membrane subunit
[Vibrio cholerae O1 str. 2010EL-1786]
gi|378795423|gb|AFC58894.1| succinate dehydrogenase cytochrome b556 large membrane subunit
[Vibrio cholerae IEC224]
Length = 130
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFIL---A 57
I+++ SI HR +GV +T A+G+ L+ ++S V F++A N+ + KF+L
Sbjct: 24 ISAIASILHRVSGV-ITFVAVGILLWLLSLSLSSPVGFMEASNIVDSFFV--KFVLWGIL 80
Query: 58 FPVSYHTANGIRHLIWDTG 76
++YH A GIRHL+ D G
Sbjct: 81 TALAYHIAGGIRHLLMDLG 99
>gi|346683374|ref|YP_004849336.1| succinate dehydrogenase subunit 3 [Cucumis sativus]
gi|325305594|gb|ADZ10763.1| succinate dehydrogenase subunit 3 [Cucumis sativus]
Length = 105
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
Query: 1 ITSVLSITHRGTGVALTA----YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFIL 56
+TS I+HR +G L + L +GL S +F SA ++L I
Sbjct: 18 LTSTFPISHRISGAFLATLVFFFYLLCLKMGLICFTYS--NFYGFFFYSAKLILISVEIT 75
Query: 57 AFPVSYHTANGIRHLIWDTGRALTIKK 83
A +SYH NG+RHL D T KK
Sbjct: 76 ALALSYHLYNGVRHLFHDFSFVTTSKK 102
>gi|336123652|ref|YP_004565700.1| succinate dehydrogenase cytochrome b556 subunit [Vibrio anguillarum
775]
gi|365539095|ref|ZP_09364270.1| succinate dehydrogenase cytochrome b556 large membrane subunit
[Vibrio ordalii ATCC 33509]
gi|335341375|gb|AEH32658.1| Succinate dehydrogenase cytochrome b556 subunit [Vibrio anguillarum
775]
Length = 130
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFIL---A 57
I+++ SI HR +GV + A+G+ L+ ++S V F++A N+ KFIL
Sbjct: 24 ISAIASILHRVSGVMMFV-AVGILLWLLSLSLSSPVGFMEASNIVNGFF--AKFILWGIL 80
Query: 58 FPVSYHTANGIRHLIWDTGR 77
+SYH A GIRHL+ D G
Sbjct: 81 TALSYHIAGGIRHLLMDLGH 100
>gi|389629408|ref|XP_003712357.1| succinate dehydrogenase cytochrome B subunit [Magnaporthe oryzae
70-15]
gi|351644689|gb|EHA52550.1| succinate dehydrogenase cytochrome B subunit [Magnaporthe oryzae
70-15]
gi|440465446|gb|ELQ34766.1| succinate dehydrogenase cytochrome B subunit [Magnaporthe oryzae
Y34]
gi|440487665|gb|ELQ67440.1| succinate dehydrogenase cytochrome B subunit [Magnaporthe oryzae
P131]
Length = 184
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 17/22 (77%)
Query: 53 KFILAFPVSYHTANGIRHLIWD 74
KF++A+P + H G+RHL+WD
Sbjct: 131 KFLIAWPFTQHAIAGVRHLVWD 152
>gi|57238921|ref|YP_180057.1| succinate dehydrogenase cytochrome B-556 subunit [Ehrlichia
ruminantium str. Welgevonden]
gi|57161000|emb|CAH57906.1| putative succinate dehydrogenase cytochrome b-556 subunit
[Ehrlichia ruminantium str. Welgevonden]
Length = 132
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 60 VSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLV 101
+ YH NG+RH++WD G LT V +G +L ++L + +
Sbjct: 82 LCYHYLNGVRHILWDFGLGLTKSAVKISGIVVLVLSLLFSFI 123
>gi|329847590|ref|ZP_08262618.1| succinate dehydrogenase, cytochrome b556 subunit [Asticcacaulis
biprosthecum C19]
gi|328842653|gb|EGF92222.1| succinate dehydrogenase, cytochrome b556 subunit [Asticcacaulis
biprosthecum C19]
Length = 112
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 45 SAPILLAGKFILAFPVSYHTANGIRHLIWDTGRALTIKK 83
S P+ L F L+ H G+RHLIWDTG + +KK
Sbjct: 43 STPLGLLVWFGLSLAGFVHLGGGLRHLIWDTGASFELKK 81
>gi|86747453|ref|YP_483949.1| succinate dehydrogenase, cytochrome b subunit [Rhodopseudomonas
palustris HaA2]
gi|86570481|gb|ABD05038.1| succinate dehydrogenase subunit C [Rhodopseudomonas palustris HaA2]
Length = 132
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 7/105 (6%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFIL---A 57
+T LSI HR TG+AL L LA L ++ + + + G+ IL
Sbjct: 20 LTMALSIVHRATGIALYFGTLLLAW-WLIACAAGPAAYANVQAFTGSWI--GRLILFGYT 76
Query: 58 FPVSYHTANGIRHLIWDTGRAL-TIKKVYTTGYAMLGAAILTNLV 101
+ + +H +G+RH +WD G T + + T A++G +LT L+
Sbjct: 77 WALMHHLLSGVRHFVWDLGYGFKTADREWLTWAALIGGIVLTVLL 121
>gi|163802540|ref|ZP_02196432.1| succinate dehydrogenase cytochrome b556 large membrane subunit
[Vibrio sp. AND4]
gi|159173623|gb|EDP58442.1| succinate dehydrogenase cytochrome b556 large membrane subunit
[Vibrio sp. AND4]
Length = 130
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 58/108 (53%), Gaps = 6/108 (5%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPV 60
IT++ SI HR +GV +T A+G+ L+ ++S + F++A ++ + KFIL +
Sbjct: 24 ITAIASILHRVSGV-ITFVAVGILLWLLSVSLSSPIGFLEAADIVDSFFV--KFILWGIL 80
Query: 61 S---YHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
S YH A G+RHL+ D G ++ + GA + +L+ +L
Sbjct: 81 SALAYHIAGGVRHLLMDLGHFEELESGAMSAKVTFGATAVLSLLAGIL 128
>gi|410662638|ref|YP_006915009.1| Succinate dehydrogenase cytochrome b subunit [Simiduia
agarivorans SA1 = DSM 21679]
gi|409024995|gb|AFU97279.1| Succinate dehydrogenase cytochrome b subunit [Simiduia
agarivorans SA1 = DSM 21679]
Length = 124
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 18/85 (21%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVG-----LTTDINSVVSFVD-ALNLSAPILLAGKF 54
IT+ +SI HR +GVAL AGV L ++S SF + + P+ K
Sbjct: 18 ITAYVSILHRISGVAL------FAGVAILLWMLEASLSSEASFTELKEHFQNPLC---KL 68
Query: 55 ILAF---PVSYHTANGIRHLIWDTG 76
IL ++YH GIRHLI DTG
Sbjct: 69 ILWATLAALAYHMVAGIRHLIMDTG 93
>gi|227114759|ref|ZP_03828415.1| succinate dehydrogenase cytochrome b556 large membrane subunit
[Pectobacterium carotovorum subsp. brasiliensis PBR1692]
gi|227327541|ref|ZP_03831565.1| succinate dehydrogenase cytochrome b556 large membrane subunit
[Pectobacterium carotovorum subsp. carotovorum WPP14]
gi|403057704|ref|YP_006645921.1| succinate dehydrogenase cytochrome b556 large membrane subunit
[Pectobacterium carotovorum subsp. carotovorum PCC21]
gi|402805030|gb|AFR02668.1| succinate dehydrogenase cytochrome b556 large membrane subunit
[Pectobacterium carotovorum subsp. carotovorum PCC21]
Length = 129
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFI---LA 57
+T++ SI HR +GV +T A+G+ L T ++S F+ A + ++ KFI +
Sbjct: 22 VTAIASILHRVSGV-ITFVAVGILLWLLGTSLSSEEGFLRAAEIMDSFIV--KFIVWGIL 78
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
++YH GIRHL+ D G I++ + G + + +VL++L
Sbjct: 79 VALAYHIVGGIRHLLMDFG---YIEEDFAAGKRSANISFIITVVLSIL 123
>gi|27363644|ref|NP_759172.1| succinate dehydrogenase cytochrome b556 large membrane subunit
[Vibrio vulnificus CMCP6]
gi|37679212|ref|NP_933821.1| succinate dehydrogenase cytochrome b556 large membrane subunit
[Vibrio vulnificus YJ016]
gi|27359760|gb|AAO08699.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio
vulnificus CMCP6]
gi|37197955|dbj|BAC93792.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio
vulnificus YJ016]
Length = 130
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFIL---A 57
IT++ SI HR +GV +T A+G+ L+ ++S V F++A ++ + KFIL
Sbjct: 24 ITAIASILHRVSGV-ITFVAVGILLWLLSISLSSPVGFMEASDIVDSFFV--KFILWGIL 80
Query: 58 FPVSYHTANGIRHLIWDTG 76
++YH A GIRHL+ D G
Sbjct: 81 TALAYHIAGGIRHLMMDLG 99
>gi|220926986|ref|YP_002502288.1| succinate dehydrogenase, cytochrome b556 subunit [Methylobacterium
nodulans ORS 2060]
gi|219951593|gb|ACL61985.1| succinate dehydrogenase, cytochrome b556 subunit [Methylobacterium
nodulans ORS 2060]
Length = 133
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 7/101 (6%)
Query: 2 TSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGK---FILAF 58
T +S+ HR TG+AL L + L + ++ L IL G+ F+ +
Sbjct: 25 TMAMSVAHRLTGIALYG-GTALVAIWLVALASGKAAYDPVAWLYGSIL--GRLVIFVYTW 81
Query: 59 PVSYHTANGIRHLIWDTGRALTI-KKVYTTGYAMLGAAILT 98
+ +H GIRHL+WD G + ++ Y ++G+ +LT
Sbjct: 82 ILMHHMLGGIRHLVWDFGYGMEPGTRIAMAKYTLVGSVVLT 122
>gi|217968584|ref|YP_002353818.1| succinate dehydrogenase, cytochrome b556 subunit [Thauera sp. MZ1T]
gi|217505911|gb|ACK52922.1| succinate dehydrogenase, cytochrome b556 subunit [Thauera sp. MZ1T]
Length = 128
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNL-SAPILLAGKFILAFP 59
I ++ SI HR +GV L AL + L + S F L S+P+ L +LA+
Sbjct: 21 IGAIASIAHRVSGV-LLFIALPVLAALLHASLRSEADFASVRGLLSSPLSLVVAGVLAWA 79
Query: 60 VSYHTANGIRHLIWDTGRALTIKKVYTTG 88
+++H GIRHL+ D G +++ +
Sbjct: 80 LAHHVLAGIRHLLMDVGIGSELERARASA 108
>gi|325928377|ref|ZP_08189572.1| succinate dehydrogenase subunit C [Xanthomonas perforans 91-118]
gi|325541253|gb|EGD12800.1| succinate dehydrogenase subunit C [Xanthomonas perforans 91-118]
Length = 131
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDI--NSVVSFVD-ALNLSAPILLAGKFILA 57
I V SI +R TG+ L+ ALG+A LT + + F D A + L G
Sbjct: 19 IQMVTSILNRATGIVLSVGALGIAAALLTLMLGPDHWNCFRDQAATWYGQVFLFG---WT 75
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTL 104
+ ++H G+RH++ D G+ ++ + G+ +++ +LVLT+
Sbjct: 76 WSFAFHLFGGLRHMLQDFGQGYAVRSFISMGW----LSVVLSLVLTI 118
>gi|78047797|ref|YP_363972.1| succinate dehydrogenase [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|78036227|emb|CAJ23918.1| putative succinate dehydrogenase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 131
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDI--NSVVSFVD-ALNLSAPILLAGKFILA 57
I V SI +R TG+ L+ ALG+A LT + + F D A + L G
Sbjct: 19 IQMVTSILNRATGIVLSVGALGIAAALLTLMLGPDHWNCFRDQAATWYGQVFLFG---WT 75
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTL 104
+ ++H G+RH++ D G+ ++ + G+ +++ +LVLT+
Sbjct: 76 WSFAFHLFGGLRHMLQDFGQGYAVRSFISMGW----LSVVLSLVLTI 118
>gi|367475764|ref|ZP_09475204.1| Succinate dehydrogenase cytochrome b556 subunit [Bradyrhizobium sp.
ORS 285]
gi|365271942|emb|CCD87672.1| Succinate dehydrogenase cytochrome b556 subunit [Bradyrhizobium sp.
ORS 285]
Length = 132
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 19/111 (17%)
Query: 1 ITSVLSITHRGTGVALT------AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKF 54
+T +LSI HR TGVAL A+ L A G S S+V S G+
Sbjct: 20 LTMILSIVHRATGVALYFGTLLLAWWLIAAASG-----PSAYSYVQGFMGS----FLGRL 70
Query: 55 IL---AFPVSYHTANGIRHLIWDTGRALTIKKVYTTGY-AMLGAAILTNLV 101
I+ + + +H +GIRH +WD G + T + A++G LT LV
Sbjct: 71 IVFGYTWALLHHLLSGIRHFVWDLGYGFKPSERETLTWGALIGGISLTVLV 121
>gi|149913137|ref|ZP_01901671.1| succinate dehydrogenase, cytochrome b556 subunit [Roseobacter sp.
AzwK-3b]
gi|149813543|gb|EDM73369.1| succinate dehydrogenase, cytochrome b556 subunit [Roseobacter sp.
AzwK-3b]
Length = 127
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
+ + YH G+RHL +D G+ L I+ G+A +G +++ V+TLL
Sbjct: 79 WAIWYHYLAGLRHLYYDAGKGLEIETSEKLGWACIGGSVILT-VITLL 125
>gi|11465650|ref|NP_049321.1| succinate:cytochrome c oxidoreductase subunit 3 [Porphyra
purpurea]
gi|1705530|sp|P80478.1|C560_PORPU RecName: Full=Succinate dehydrogenase cytochrome b560 subunit;
AltName: Full=Succinate dehydrogenase, subunit III
gi|4106957|gb|AAD03124.1| succinate:cytochrome c oxidoreductase subunit 3 [Porphyra
purpurea]
Length = 125
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 2 TSVLSITHRGTGVAL-TAYALGLAGVGLTTDINSVVSFVD-ALNLSAPILLAGKFILAFP 59
+S+ SI HR +GVA+ T A + L T + +D LN S+ IL I++
Sbjct: 20 SSLFSIWHRISGVAMFTLIASPPLFLKLATFSYKSFNILDLMLNNSSLILPWFIVIISVI 79
Query: 60 VSYHTANGIRHLIWDT 75
YH NGIRH +WD+
Sbjct: 80 FLYHIINGIRHFLWDS 95
>gi|146337397|ref|YP_001202445.1| succinate dehydrogenase cytochrome b556 subunit [Bradyrhizobium sp.
ORS 278]
gi|146190203|emb|CAL74195.1| Succinate dehydrogenase cytochrome b556 subunit [Bradyrhizobium sp.
ORS 278]
Length = 132
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 50/106 (47%), Gaps = 9/106 (8%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDIN-SVVSFVDALNLSAPILLAGKFIL--- 56
+T +LSI HR TGVAL L LA + S S+V S G+ I+
Sbjct: 20 LTMILSIVHRATGVALYFGTLLLAWWLIAAASGPSAYSYVQGFMGS----FLGRLIVFGY 75
Query: 57 AFPVSYHTANGIRHLIWDTGRALTIKKVYT-TGYAMLGAAILTNLV 101
+ + +H +GIRH +WD G + T T A++G LT LV
Sbjct: 76 TWALLHHLLSGIRHFVWDLGYGFKPNERETLTWGALIGGISLTVLV 121
>gi|383316897|ref|YP_005377739.1| succinate dehydrogenase, cytochrome b556 subunit [Frateuria
aurantia DSM 6220]
gi|379044001|gb|AFC86057.1| succinate dehydrogenase, cytochrome b556 subunit [Frateuria
aurantia DSM 6220]
Length = 131
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 1 ITSVLSITHRGTGVALTAYALG----LAGV-GLTTDINSVVSFVDALNLSAPILLAGKFI 55
+ V SI HR TG+AL A+G L GV L + + SF +P+ L F
Sbjct: 19 VQMVTSILHRATGIAL---AVGTIVVLWGVLALASGEAAYDSFKSVAG--SPLGLLLLFG 73
Query: 56 LAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGY-AMLGAAILTNLV 101
++ + YH NG+RHL+ DTG + + + +++ + +LT LV
Sbjct: 74 WSWALFYHLCNGVRHLVQDTGAGYAKPQFIRSSWLSVIASVVLTVLV 120
>gi|395788065|ref|ZP_10467641.1| succinate dehydrogenase, cytochrome b556 subunit [Bartonella
birtlesii LL-WM9]
gi|395409847|gb|EJF76432.1| succinate dehydrogenase, cytochrome b556 subunit [Bartonella
birtlesii LL-WM9]
Length = 157
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 17/114 (14%)
Query: 1 ITSVLSITHRGTGVAL-------TAYALGLA-GVGLTTDINSVVSFVDALNLSAPILLAG 52
IT +SI HR TG+AL T + L +A G I+ + S V L + LAG
Sbjct: 47 ITMAMSIAHRLTGMALYFGMVFLTVWLLAIACGAETFRVIHEIYSSVPGLCILFLYTLAG 106
Query: 53 KFILAFPVSYHTANGIRHLIWDTGRALTIK-KVYTTGYAMLGAAILTNLVLTLL 105
+H G+RH+IWD +L K K +A + +++ LV+ L+
Sbjct: 107 --------VHHMVGGLRHIIWDLKPSLLAKEKASMVAWATVFISLIMTLVIWLI 152
>gi|312112888|ref|YP_004010484.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodomicrobium
vannielii ATCC 17100]
gi|311218017|gb|ADP69385.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodomicrobium
vannielii ATCC 17100]
Length = 148
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 13/108 (12%)
Query: 1 ITSVLSITHRGTGVALTAY------ALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKF 54
I +LSI HR TG+ T Y A+ +A + + VS A L IL+
Sbjct: 29 INMILSIMHRVTGI--TNYFGSLILAIWIASAATSEQAFNTVSSYLATPLGLVILIG--- 83
Query: 55 ILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYA-MLGAAILTNLV 101
+ V +H GIRH +WD G + + V +A ++G+ LT ++
Sbjct: 84 -FTWSVMHHMLGGIRHFVWDVGWGFSKEAVKFLSWASLIGSITLTAII 130
>gi|357040027|ref|ZP_09101817.1| succinate dehydrogenase, cytochrome b556 subunit [Desulfotomaculum
gibsoniae DSM 7213]
gi|355357007|gb|EHG04786.1| succinate dehydrogenase, cytochrome b556 subunit [Desulfotomaculum
gibsoniae DSM 7213]
Length = 129
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 9 HRGTGVALTAYALGLAGVGLTTDINSVVSFVDALN------LSAPILLAGKFILAFPVSY 62
HR TG+ L Y + + +TT S++S + N +S IL + +L V Y
Sbjct: 30 HRITGIGLLLYIM----IHVTTMATSLISGAETFNTTLSYLMSNTILHYAELLLVGAVIY 85
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAI 96
H NGIR L++D G + +K ++GAAI
Sbjct: 86 HGLNGIRLLLFDIGIGFSRQKEIFWVTMVIGAAI 119
>gi|83592538|ref|YP_426290.1| succinate dehydrogenase subunit C [Rhodospirillum rubrum ATCC
11170]
gi|386349264|ref|YP_006047512.1| succinate dehydrogenase subunit C [Rhodospirillum rubrum F11]
gi|83575452|gb|ABC22003.1| succinate dehydrogenase subunit C [Rhodospirillum rubrum ATCC
11170]
gi|346717700|gb|AEO47715.1| succinate dehydrogenase subunit C [Rhodospirillum rubrum F11]
Length = 132
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 40/93 (43%), Gaps = 11/93 (11%)
Query: 1 ITSVLSITHRGTGVALTA-----YALGLAGVGLTTD-INSVVSFVDALNLSAPILLAGKF 54
+TS+LSIT R G AL + L + G SV F +P F
Sbjct: 21 VTSMLSITFRVFGAALMVGGTFFFLLWIVAAGSGEQAFTSVQGFY-----GSPFGYLVLF 75
Query: 55 ILAFPVSYHTANGIRHLIWDTGRALTIKKVYTT 87
L + YH NGIRH++WDTG + + T
Sbjct: 76 GLTVVLFYHLCNGIRHMLWDTGFGFDMPTLRKT 108
>gi|110804651|ref|YP_688171.1| succinate dehydrogenase cytochrome b556 large membrane subunit
[Shigella flexneri 5 str. 8401]
gi|161486531|ref|NP_836287.2| succinate dehydrogenase cytochrome b556 large membrane subunit
[Shigella flexneri 2a str. 2457T]
gi|384542179|ref|YP_005726241.1| Succinate dehydrogenase cytochrome b-556 subunit [Shigella flexneri
2002017]
gi|424837118|ref|ZP_18261755.1| succinate dehydrogenase cytochrome b556 large membrane subunit
[Shigella flexneri 5a str. M90T]
gi|110614199|gb|ABF02866.1| succinate dehydrogenase, cytochrome b556 [Shigella flexneri 5 str.
8401]
gi|281599964|gb|ADA72948.1| Succinate dehydrogenase cytochrome b-556 subunit [Shigella flexneri
2002017]
gi|383466170|gb|EID61191.1| succinate dehydrogenase cytochrome b556 large membrane subunit
[Shigella flexneri 5a str. M90T]
Length = 129
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 17/112 (15%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF-- 58
IT++ SI HR +GV +T A+G+ L T ++S F A SA + G F + F
Sbjct: 22 ITAIASILHRVSGV-ITFVAVGILQWLLGTSLSSPEGFEQA---SA---IMGSFFVKFIM 74
Query: 59 -----PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
++YH GIRH++ D G +++ + G + + +VL+LL
Sbjct: 75 WGILTALAYHVVVGIRHMMMDFG---YLEETFEAGKRSAKISFVITVVLSLL 123
>gi|294624875|ref|ZP_06703532.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 11122]
gi|294665038|ref|ZP_06730345.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 10535]
gi|292600834|gb|EFF44914.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 11122]
gi|292605195|gb|EFF48539.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 10535]
Length = 131
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 10/106 (9%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDI--NSVVSFVD-ALNLSAPILLAGKFILA 57
I V SI +R TG+ L+ ALG+A LT + + F D A + L G
Sbjct: 19 IQMVTSILNRATGIVLSVGALGIAAALLTLMLGPDHWNCFRDQAATWYGQVFLFG---WT 75
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLT 103
+ ++H G+RH++ D G+ ++ + G+ +++ +LVLT
Sbjct: 76 WSFAFHLFGGLRHMLQDFGQGYAVRSFISMGW----LSVVLSLVLT 117
>gi|86147665|ref|ZP_01065974.1| Succinate dehydrogenase [Vibrio sp. MED222]
gi|85834576|gb|EAQ52725.1| Succinate dehydrogenase [Vibrio sp. MED222]
Length = 126
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILA--- 57
IT++ SI HR +GV +T A+G+ L+ ++S V F++A ++ + KFIL
Sbjct: 20 ITAIASILHRVSGV-ITFVAIGILLWLLSISLSSPVGFMEASDIVDGFFV--KFILWGIL 76
Query: 58 FPVSYHTANGIRHLIWDTGR 77
++YH A GIRHL+ D G
Sbjct: 77 TALAYHIAGGIRHLLMDLGH 96
>gi|344915229|ref|NP_706513.3| succinate dehydrogenase, cytochrome b556 [Shigella flexneri 2a str.
301]
gi|24050819|gb|AAN42220.1| succinate dehydrogenase, cytochrome b556 [Shigella flexneri 2a str.
301]
gi|30040361|gb|AAP16093.1| succinate dehydrogenase, cytochrome b556 [Shigella flexneri 2a str.
2457T]
Length = 134
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 17/112 (15%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF-- 58
IT++ SI HR +GV +T A+G+ L T ++S F A SA + G F + F
Sbjct: 27 ITAIASILHRVSGV-ITFVAVGILQWLLGTSLSSPEGFEQA---SA---IMGSFFVKFIM 79
Query: 59 -----PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
++YH GIRH++ D G +++ + G + + +VL+LL
Sbjct: 80 WGILTALAYHVVVGIRHMMMDFG---YLEETFEAGKRSAKISFVITVVLSLL 128
>gi|308072487|dbj|BAJ22105.1| succinate dehydrogenase cytochrome subunit 3 [Cycas taitungensis]
Length = 130
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 1 ITSVLSITHRGTGVALTAYALG----LAGVGLTT-DINSVVSFVDALNLSAPIL-LAGKF 54
+TS SI HR +G L L +GL + + F ++N IL L
Sbjct: 18 LTSTFSILHRISGAFLATMVLFSLLFCLEIGLISFTYGNFYQFSFSVNFPKFILGLVNLT 77
Query: 55 ILAFPVSYHTANGIRHLIWDTGRALTIKKV 84
+LA + YH +NG+RHL WD G L +
Sbjct: 78 LLA--LCYHMSNGVRHLWWDLGFFLEFSLI 105
>gi|389737450|ref|ZP_10190885.1| succinate dehydrogenase membrane anchor subunit [Rhodanobacter sp.
115]
gi|388435264|gb|EIL92176.1| succinate dehydrogenase membrane anchor subunit [Rhodanobacter sp.
115]
Length = 131
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 1 ITSVLSITHRGTGVALTAYALG-LAGVGLTTDINSVVSFVDALN--LSAP---ILLAGKF 54
+ V SI HR TG+AL A+G L + + + S D + +P ILL G
Sbjct: 19 VQMVSSILHRATGIAL---AVGTLLVLWGLLALAAGESHFDQFKACIGSPVGIILLIG-- 73
Query: 55 ILAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAIL 97
++ + YH NGIRHL+ DTG I + + + L A+I+
Sbjct: 74 -WSWSLFYHLCNGIRHLVQDTGAGYAIPQFVRSSWLSLIASIV 115
>gi|268315783|ref|YP_003289502.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodothermus
marinus DSM 4252]
gi|262333317|gb|ACY47114.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodothermus
marinus DSM 4252]
Length = 136
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 9 HRGTGVALTAY-ALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSYHTANG 67
HR TG+ L Y L + G+ TD + + + API G+F+L V+YH NG
Sbjct: 31 HRLTGIGLVVYLILHVWGLRALTDREAFNELIATYH--APIFKIGEFLLLAAVAYHALNG 88
Query: 68 IR 69
+R
Sbjct: 89 LR 90
>gi|148560663|ref|YP_001259728.1| succinate dehydrogenase, cytochrome subunit B [Brucella ovis ATCC
25840]
gi|189024973|ref|YP_001935741.1| Succinate dehydrogenase [Brucella abortus S19]
gi|225628104|ref|ZP_03786139.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella ceti
str. Cudo]
gi|237816266|ref|ZP_04595259.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella abortus
str. 2308 A]
gi|261323851|ref|ZP_05963048.1| succinate dehydrogenase cytochrome B subunit [Brucella neotomae
5K33]
gi|297247147|ref|ZP_06930865.1| succinate dehydrogenase cytochrome b-556 subunit [Brucella abortus
bv. 5 str. B3196]
gi|148371920|gb|ABQ61899.1| succinate dehydrogenase, cytochrome B subunit [Brucella ovis ATCC
25840]
gi|189020545|gb|ACD73267.1| Succinate dehydrogenase [Brucella abortus S19]
gi|225616929|gb|EEH13976.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella ceti
str. Cudo]
gi|237788333|gb|EEP62548.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella abortus
str. 2308 A]
gi|261299831|gb|EEY03328.1| succinate dehydrogenase cytochrome B subunit [Brucella neotomae
5K33]
gi|297174316|gb|EFH33663.1| succinate dehydrogenase cytochrome b-556 subunit [Brucella abortus
bv. 5 str. B3196]
Length = 187
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 14/110 (12%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSF--VDALNLSAPILLAGKFIL-- 56
IT +SI HR TG AL L LA L + S F ++AL S G+ IL
Sbjct: 78 ITMTMSIVHRITGGALYFGTLLLAA-WLISAATSEECFNTINALFSS----WIGRLILFG 132
Query: 57 -AFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
+ + +H A G+RH IWDTG A+ T + A+++ ++V T+L
Sbjct: 133 YTWALLHHLAGGVRHFIWDTGAAMEKH----TASKIAWASVVFSVVATIL 178
>gi|283784477|ref|YP_003364342.1| succinate dehydrogenase cytochrome b-556 subunit [Citrobacter
rodentium ICC168]
gi|282947931|emb|CBG87495.1| succinate dehydrogenase cytochrome b-556 subunit [Citrobacter
rodentium ICC168]
Length = 134
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 17/112 (15%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAF-- 58
IT++ SI HR +GV +T A+G+ L T ++S F A SA + G F + F
Sbjct: 27 ITAIASILHRVSGV-ITFVAVGILLWLLGTSLSSPEGFQQA---SA---IMGSFFVKFIM 79
Query: 59 -----PVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
++YH G+RH+ D G +++ + G A + +VL+LL
Sbjct: 80 WGILTALAYHVVGGVRHMFMDFG---YLEETFEAGQRSAKIAFVITVVLSLL 128
>gi|217979669|ref|YP_002363816.1| succinate dehydrogenase, cytochrome b556 subunit [Methylocella
silvestris BL2]
gi|217505045|gb|ACK52454.1| succinate dehydrogenase, cytochrome b556 subunit [Methylocella
silvestris BL2]
Length = 131
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFIL---A 57
+T ++SI HR TG AL L LA L + + +F A ++ + GK +L
Sbjct: 22 LTMMMSIVHRITGAALYGGTLLLAWF-LISAASGPGAFAAASHVVSSFF--GKLVLFGFT 78
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYA-MLGAAILTNLV 101
+ + +H G+RHLIWD G L + +A ++G LT LV
Sbjct: 79 WALFHHLLGGVRHLIWDLGYGLDDPEREWLAWATLIGGIALTLLV 123
>gi|443689028|gb|ELT91539.1| hypothetical protein CAPTEDRAFT_129043 [Capitella teleta]
Length = 128
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 6 SITHRGTGVALTAYALG--LAGVGLTTDINSVVSFVDALNLSAPIL-LAGKFILAFPVSY 62
SI HR TGV L ALG L V L + ++ + ++ L LA F + + + +
Sbjct: 24 SILHRMTGVGL---ALGFLLLVVWLACLASGPEAYAAFMGYASCYLGLALLFFITWALMH 80
Query: 63 HTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
H +G+RHLIWD G K AM A + LV+
Sbjct: 81 HMLSGVRHLIWDVGLNFDPAKATMMALAMAVIAFVLTLVI 120
>gi|417948676|ref|ZP_12591819.1| succinate dehydrogenase cytochrome b556 large membrane subunit
[Vibrio splendidus ATCC 33789]
gi|342809287|gb|EGU44408.1| succinate dehydrogenase cytochrome b556 large membrane subunit
[Vibrio splendidus ATCC 33789]
Length = 130
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFIL---A 57
IT++ SI HR +GV +T A+G+ L+ ++S V F++A ++ + KFIL
Sbjct: 24 ITAIASILHRVSGV-ITFVAIGILLWLLSISLSSPVGFMEASDIVDGFFV--KFILWGIL 80
Query: 58 FPVSYHTANGIRHLIWDTGR 77
++YH A GIRHL+ D G
Sbjct: 81 TALAYHIAGGIRHLLMDLGH 100
>gi|24373491|ref|NP_717534.1| succinate dehydrogenase cytochrome b556 subunit SdhC [Shewanella
oneidensis MR-1]
gi|24347791|gb|AAN54978.1| succinate dehydrogenase cytochrome b556 subunit SdhC [Shewanella
oneidensis MR-1]
Length = 131
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Query: 2 TSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILA---F 58
T+++SI HR +GV + +A+G+ L + + S SF +L ++ KFI+
Sbjct: 26 TAIVSILHRVSGVIML-FAVGILIWLLNSSLASAESFAGVQSLFDNFVV--KFIMWGILT 82
Query: 59 PVSYHTANGIRHLIWDTGR 77
+++H G+RHL+ DTGR
Sbjct: 83 ALTFHLFGGLRHLVMDTGR 101
>gi|89068123|ref|ZP_01155540.1| succinate dehydrogenase, cytochrome b556 subunit [Oceanicola
granulosus HTCC2516]
gi|89046362|gb|EAR52419.1| succinate dehydrogenase, cytochrome b556 subunit [Oceanicola
granulosus HTCC2516]
Length = 127
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 54 FILAFPVSYHTANGIRHLIWDTGRALTI--KKVYTTGYAMLGAAILT 98
F+ V YH G+RHLIWD G L + + Y T AM+ + +LT
Sbjct: 75 FLSVLAVWYHLFAGVRHLIWDQGYMLDVSSSETYATA-AMIASVLLT 120
>gi|158425367|ref|YP_001526659.1| succinate dehydrogenase cytochrome b-556 subunit [Azorhizobium
caulinodans ORS 571]
gi|158332256|dbj|BAF89741.1| succinate dehydrogenase cytochrome b-556 subunit [Azorhizobium
caulinodans ORS 571]
Length = 133
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 50/112 (44%), Gaps = 23/112 (20%)
Query: 2 TSVLSITHRGTGVALT-----------AYALGLAGVGLTTDINSVVSFVDALNLSAPILL 50
T V+SI HR TG+AL A A + GL T I S++ L L
Sbjct: 24 TMVMSIVHRATGIALYFGTVLLIWWLLAAASTPSAYGLFTSIAG--SWIGRLVL------ 75
Query: 51 AGKFILAFPVSYHTANGIRHLIWDTGRAL-TIKKVYTTGYAMLGAAILTNLV 101
F + + +H GIRHLIWDT R ++V ++G+ LT +V
Sbjct: 76 ---FGYTWALIHHALGGIRHLIWDTIRGFGAQERVLLAKLTLVGSVTLTIIV 124
>gi|316931809|ref|YP_004106791.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodopseudomonas
palustris DX-1]
gi|315599523|gb|ADU42058.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodopseudomonas
palustris DX-1]
Length = 132
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 15/112 (13%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFI----- 55
+T +SI HR TG+AL + L LA I N+ A G +I
Sbjct: 20 LTMTMSIVHRATGIALYSGTLLLA----WWLIACAAGPAAYANVQA---FTGSWIGRLIV 72
Query: 56 --LAFPVSYHTANGIRHLIWDTGRAL-TIKKVYTTGYAMLGAAILTNLVLTL 104
+ + +H +G+RH +WD G T + + T A++G +LT L+ +
Sbjct: 73 FGYTWALMHHLLSGVRHFVWDLGYGFKTADREWLTWAALIGGIVLTVLLWVI 124
>gi|218710215|ref|YP_002417836.1| succinate dehydrogenase cytochrome b556 large membrane subunit
[Vibrio splendidus LGP32]
gi|218323234|emb|CAV19411.1| Succinate dehydrogenase cytochrome [Vibrio splendidus LGP32]
Length = 130
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILA--- 57
IT++ SI HR +GV +T A+G+ L+ ++S V F++A ++ + KFIL
Sbjct: 24 ITAIASILHRVSGV-ITFVAIGILLWLLSISLSSPVGFMEASDIVDGFFV--KFILWGIL 80
Query: 58 FPVSYHTANGIRHLIWDTGR 77
++YH A GIRHL+ D G
Sbjct: 81 TALAYHIAGGIRHLLMDLGH 100
>gi|312386133|gb|ADQ74623.1| succinate dehydrogenase cytochrome b556 subunit [Pseudomonas
putida]
Length = 128
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALN-LSAPILLAGKFI---L 56
IT+V S HR +G+ + LG+ L+ + S F D + L++P+ KF+ L
Sbjct: 22 ITAVTSFLHRVSGI-IVFLGLGIMLFALSKSLGSEEGFADVKDYLTSPL---AKFVAWGL 77
Query: 57 AFPVSYHTANGIRHLIWDTGRALTIK 82
+ YH G+RHLI D G T++
Sbjct: 78 LSALLYHMIAGVRHLIMDMGVGETLE 103
>gi|389696108|ref|ZP_10183750.1| succinate dehydrogenase, cytochrome b556 subunit [Microvirga sp.
WSM3557]
gi|388584914|gb|EIM25209.1| succinate dehydrogenase, cytochrome b556 subunit [Microvirga sp.
WSM3557]
Length = 131
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 2 TSVLSITHRGTGVALTA----YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILA 57
T +S+ HR TG+AL +A+ L + + V + L IL +IL
Sbjct: 23 TMAMSVAHRITGIALYGGIALFAIWLVALASGPSAFNAVQWFFGSPLGYLILFVYTWILM 82
Query: 58 FPVSYHTANGIRHLIWDTGRALTI-KKVYTTGYAMLGAAILT 98
+H G+RHL+WD G + +++ + ++G+ LT
Sbjct: 83 ----HHMLGGVRHLVWDFGYGMEPEQRINMARFTLVGSVALT 120
>gi|346725078|ref|YP_004851747.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
axonopodis pv. citrumelo F1]
gi|346649825|gb|AEO42449.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
axonopodis pv. citrumelo F1]
Length = 131
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDI--NSVVSFVDAL-NLSAPILLAGKFILA 57
I V SI +R TG+ L+ ALG+A LT + + F D + + L G
Sbjct: 19 IQMVTSILNRATGIVLSVGALGIAAALLTLMLGPDHWNCFRDQVATWYGQVFLFG---WT 75
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTL 104
+ ++H G+RH++ D G+ ++ + G+ +++ +LVLT+
Sbjct: 76 WSFAFHLFGGLRHMLQDFGQGYAVRSFISMGW----LSVVLSLVLTI 118
>gi|340779270|ref|ZP_08699213.1| succinate dehydrogenase, cytochrome b556 subunit [Acetobacter aceti
NBRC 14818]
Length = 158
Score = 34.7 bits (78), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 1 ITSVLSITHRGTGVALTA-YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFIL--- 56
++ LSI++R TGV T ALG+ L SF A ++ L G+ +L
Sbjct: 34 LSMFLSISNRITGVVATGGSALGV--FWLAALAKGPKSFASARKVTGNPL--GQLVLFGW 89
Query: 57 AFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLG 93
+ +HT G+RH IWD G K++ G LG
Sbjct: 90 ILSLVWHTVGGLRHFIWDAGHRYDKKELNEDGPVALG 126
>gi|71082950|ref|YP_265669.1| succinate dehydrogenase cytochrome b [Candidatus Pelagibacter
ubique HTCC1062]
gi|71062063|gb|AAZ21066.1| Succinate dehydrogenase cytochrome b [Candidatus Pelagibacter
ubique HTCC1062]
Length = 127
Score = 34.3 bits (77), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 18/114 (15%)
Query: 1 ITSVLSITHRGTGV----ALTAYALGLAGVGLTTDINSVVSFVDALNLSAPIL--LAGKF 54
I+S++SI+HR TG+ A+T L + + L + +L+ L + GKF
Sbjct: 18 ISSLVSISHRITGIVNIFAITVICLWIFSLLLGES---------SYDLTKLFLQSIFGKF 68
Query: 55 I---LAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
I L + S+ + IRHL+ D G +K TG ++ +I ++ LL
Sbjct: 69 IIICLTWSFSFQVLSEIRHLVMDLGYGFELKTTKITGLFVIFGSIFFTILFYLL 122
>gi|57013903|ref|YP_173376.1| succinate dehydrogenase subunit 3 [Nicotiana tabacum]
gi|57013992|ref|YP_173464.1| succinate dehydrogenase subunit 3 [Nicotiana tabacum]
gi|57014032|ref|YP_173503.1| succinate dehydrogenase subunit 3 [Nicotiana tabacum]
gi|56806628|dbj|BAD83529.1| succinate dehydrogenase subunit 3 (mitochondrion) [Nicotiana
tabacum]
gi|56806668|dbj|BAD83569.1| succinate dehydrogenase subunit 3 (mitochondrion) [Nicotiana
tabacum]
Length = 108
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 1 ITSVLSITHRGTGVALTA----YALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFIL 56
+TS SI+HR +G L + L +GL + +F S+ ++L I
Sbjct: 18 LTSTFSISHRISGAFLATIVFFFYLLCLKIGLICF--TYENFYQFFFYSSKLILISVEIT 75
Query: 57 AFPVSYHTANGIRHLIWD 74
A +SYH NG+RHL+ D
Sbjct: 76 ALALSYHLYNGVRHLLTD 93
>gi|375264797|ref|YP_005022240.1| succinate dehydrogenase cytochrome b556 large membrane subunit
[Vibrio sp. EJY3]
gi|369840121|gb|AEX21265.1| succinate dehydrogenase cytochrome b556 large membrane subunit
[Vibrio sp. EJY3]
Length = 130
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILA--- 57
IT++ SI HR +GV +T A+G+ L+ ++S + F++A ++ + KFIL
Sbjct: 24 ITAIASILHRVSGV-ITFVAVGILLWLLSISLSSPMGFMEAADIVDSFFV--KFILWGIL 80
Query: 58 FPVSYHTANGIRHLIWDTG 76
++YH A GIRHL+ D G
Sbjct: 81 TALAYHIAGGIRHLMMDLG 99
>gi|384214205|ref|YP_005605368.1| succinate dehydrogenase cytochrome B-556 subunit [Bradyrhizobium
japonicum USDA 6]
gi|354953101|dbj|BAL05780.1| succinate dehydrogenase cytochrome B-556 subunit [Bradyrhizobium
japonicum USDA 6]
Length = 132
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 9/106 (8%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFIL---A 57
+T LSI HR TG+AL L LA L + ++ + I+ G+ I+
Sbjct: 20 LTMALSIVHRATGIALYVGTLLLAWW-LIAAASGPAAYSHVQAFTGSII--GRLIMFGYT 76
Query: 58 FPVSYHTANGIRHLIWDTGRALTI--KKVYTTGYAMLGAAILTNLV 101
+ + +H +GIRH +WD G ++ T G A++G LT L+
Sbjct: 77 WALMHHMLSGIRHFVWDLGYGFKANEREALTWG-ALIGGIALTVLI 121
>gi|15004512|gb|AAK77127.1|AF362731_1 succinate dehydrogenase subunit 3 [Podophyllum peltatum]
Length = 95
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 12/81 (14%)
Query: 1 ITSVLSITHRGTG-----VALTAYALGLA--GVGLTTDINSVVSFVDALNLSAPILLAGK 53
+TS SI HR +G + L Y L L + T + +F L S+ ++L
Sbjct: 6 LTSTFSIFHRISGAFLATIVLFCYLLYLKMGFICFTYE-----NFYQFLFYSSKLILILV 60
Query: 54 FILAFPVSYHTANGIRHLIWD 74
I A +SYH NG+RHL+ D
Sbjct: 61 EITALALSYHLYNGVRHLLTD 81
>gi|347761195|ref|YP_004868756.1| succinate dehydrogenase cytochrome b subunit [Gluconacetobacter
xylinus NBRC 3288]
gi|347580165|dbj|BAK84386.1| succinate dehydrogenase cytochrome b subunit [Gluconacetobacter
xylinus NBRC 3288]
Length = 195
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
YH G+RHL WD+G + K++ G +G + T L L
Sbjct: 138 YHFVAGLRHLAWDSGYRFSKKEINDDGPVAVGVTVGTTLAL 178
>gi|330991156|ref|ZP_08315109.1| Succinate dehydrogenase cytochrome b556 subunit [Gluconacetobacter
sp. SXCC-1]
gi|329761742|gb|EGG78233.1| Succinate dehydrogenase cytochrome b556 subunit [Gluconacetobacter
sp. SXCC-1]
Length = 130
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 62 YHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
YH G+RHL WD+G + K++ G +G + T L L
Sbjct: 73 YHFVAGLRHLAWDSGYRFSKKEINEDGPVAVGVTLGTTLAL 113
>gi|425898748|ref|ZP_18875339.1| outer membrane transport barrel [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397892303|gb|EJL08781.1| outer membrane transport barrel [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 3513
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 11 GTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFPVSYHTANGIRH 70
G+G AL AL AG G T D ++ VS +A+NLS + L G L + NG
Sbjct: 607 GSGTALGTGALN-AGAGTTLDASAAVSLGNAINLSGDLTLGGSQNLTLGGAI---NGAGG 662
Query: 71 LIWDTGRALTIKKV 84
LI D ALT+ V
Sbjct: 663 LIKDGAAALTLNGV 676
>gi|161504118|ref|YP_001571230.1| succinate dehydrogenase cytochrome b556 large membrane subunit
[Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
str. RSK2980]
gi|160865465|gb|ABX22088.1| hypothetical protein SARI_02216 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 134
Score = 34.3 bits (77), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 1 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILA--- 57
IT++ SI HR +GV +T A+G+ L T ++S F A ++ L+ KFI+
Sbjct: 27 ITAIASILHRVSGV-ITFIAVGILLWLLGTSLSSPEGFQQAADIMDGFLV--KFIMWGIL 83
Query: 58 FPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
++YH GIRH++ D G +++ + G + + +VL+LL
Sbjct: 84 TALAYHVIVGIRHMLMDFG---YLEETFEAGQRSAKISFVITVVLSLL 128
>gi|91762626|ref|ZP_01264591.1| Succinate dehydrogenase cytochrome b [Candidatus Pelagibacter
ubique HTCC1002]
gi|91718428|gb|EAS85078.1| Succinate dehydrogenase cytochrome b [Candidatus Pelagibacter
ubique HTCC1002]
Length = 127
Score = 34.3 bits (77), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 18/114 (15%)
Query: 1 ITSVLSITHRGTGV----ALTAYALGLAGVGLTTDINSVVSFVDALNLSAPIL--LAGKF 54
I+S++SI+HR TG+ A+T L + + L + +L+ L + GKF
Sbjct: 18 ISSLVSISHRITGIVNIFAITVICLWIFSLLLGES---------SYDLTKLFLQSIFGKF 68
Query: 55 I---LAFPVSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVLTLL 105
I L + S+ + IRHL+ D G +K TG ++ +I ++ LL
Sbjct: 69 IIICLTWSFSFQVLSEIRHLVMDLGYGFELKTTKITGLLVIFGSIFFTILFYLL 122
>gi|381156898|ref|ZP_09866132.1| succinate dehydrogenase, cytochrome b556 subunit [Thiorhodovibrio
sp. 970]
gi|380880761|gb|EIC22851.1| succinate dehydrogenase, cytochrome b556 subunit [Thiorhodovibrio
sp. 970]
Length = 178
Score = 34.3 bits (77), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 1 ITSVLSITHRGTGVALT-AYALGLAGVGLTTDINSVVSFVDALNLSAPILLAGKFILAFP 59
+ ++SI HR +GV + A +G +G S + L LSAP++ +L +
Sbjct: 72 LPGMVSILHRLSGVFMVLAIPIGAWALGSAVASASGYERITGL-LSAPLVKIALLVLLWS 130
Query: 60 VSYHTANGIRHLIWDTGRALTIKKVYTTGYAMLGAAILTNLVL 102
+H G+R+L+ D G A+ +K T LGA ++ L+L
Sbjct: 131 FLHHLFAGLRYLVMDLGLAVDLKPARLTAAIALGAGLVITLIL 173
>gi|339018097|ref|ZP_08644239.1| succinate dehydrogenase cytochrome b subunit [Acetobacter
tropicalis NBRC 101654]
gi|338752762|dbj|GAA07543.1| succinate dehydrogenase cytochrome b subunit [Acetobacter
tropicalis NBRC 101654]
Length = 135
Score = 34.3 bits (77), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 13/17 (76%), Positives = 14/17 (82%)
Query: 60 VSYHTANGIRHLIWDTG 76
V YHT GIRHLIWD+G
Sbjct: 71 VVYHTVGGIRHLIWDSG 87
>gi|270268641|gb|ACZ65862.1| ENSANGP00000017418-like protein [Nasonia vitripennis]
gi|270268643|gb|ACZ65863.1| ENSANGP00000017418-like protein [Nasonia vitripennis]
gi|270268645|gb|ACZ65864.1| ENSANGP00000017418-like protein [Nasonia vitripennis]
gi|270268647|gb|ACZ65865.1| ENSANGP00000017418-like protein [Nasonia vitripennis]
gi|270268649|gb|ACZ65866.1| ENSANGP00000017418-like protein [Nasonia vitripennis]
Length = 101
Score = 34.3 bits (77), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 20/21 (95%)
Query: 1 ITSVLSITHRGTGVALTAYAL 21
+TS+LS+THRGTG+ L++YA+
Sbjct: 69 LTSMLSVTHRGTGIVLSSYAM 89
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.138 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,521,559,580
Number of Sequences: 23463169
Number of extensions: 55596900
Number of successful extensions: 375466
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 602
Number of HSP's successfully gapped in prelim test: 510
Number of HSP's that attempted gapping in prelim test: 374331
Number of HSP's gapped (non-prelim): 1125
length of query: 105
length of database: 8,064,228,071
effective HSP length: 73
effective length of query: 32
effective length of database: 6,351,416,734
effective search space: 203245335488
effective search space used: 203245335488
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 69 (31.2 bits)