RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy9434
         (100 letters)



>d1dc1a_ c.52.1.11 (A:) Restriction endonuclease BsobI {Bacillus
          stearothermophilus [TaxId: 1422]}
          Length = 319

 Score = 24.1 bits (52), Expect = 3.9
 Identities = 7/32 (21%), Positives = 14/32 (43%)

Query: 32 KIKTVGACYMAASGLDPKHHSHLDELDHVCAL 63
           ++ +    + ASG+  K    L E D   ++
Sbjct: 60 YLEDIQDALLYASGISDKAKKFLTEDDKKESI 91


>d2afwa1 c.56.5.8 (A:33-361) Glutaminyl-peptide cyclotransferase,
           QPCT {Human (Homo sapiens) [TaxId: 9606]}
          Length = 329

 Score = 23.6 bits (50), Expect = 4.9
 Identities = 4/25 (16%), Positives = 10/25 (40%)

Query: 36  VGACYMAASGLDPKHHSHLDELDHV 60
           V   ++  S      H+  D  +++
Sbjct: 283 VPVLHLIPSPFPEVWHTMDDNEENL 307


>d1tkja1 c.56.5.4 (A:1-277) Aminopeptidase {Streptomyces griseus
           [TaxId: 1911]}
          Length = 277

 Score = 23.5 bits (49), Expect = 6.1
 Identities = 6/21 (28%), Positives = 9/21 (42%)

Query: 40  YMAASGLDPKHHSHLDELDHV 60
             A    D  +HS  D L ++
Sbjct: 236 GTAGQAFDRCYHSSCDSLSNI 256


>d2bs2a1 a.7.3.1 (A:458-655) Fumarate reductase {Wolinella
           succinogenes [TaxId: 844]}
          Length = 198

 Score = 23.1 bits (49), Expect = 7.8
 Identities = 6/20 (30%), Positives = 11/20 (55%)

Query: 10  TVEPRLVDFDELLSEPRFRS 29
           T+E   +D +E+   P +R 
Sbjct: 120 TLEYEALDVNEMEIAPGYRG 139


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.325    0.139    0.419 

Gapped
Lambda     K      H
   0.267   0.0541    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 376,499
Number of extensions: 15178
Number of successful extensions: 48
Number of sequences better than 10.0: 1
Number of HSP's gapped: 48
Number of HSP's successfully gapped: 9
Length of query: 100
Length of database: 2,407,596
Length adjustment: 62
Effective length of query: 38
Effective length of database: 1,556,336
Effective search space: 59140768
Effective search space used: 59140768
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 47 (22.3 bits)