BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9435
(106 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|118781278|ref|XP_311387.3| AGAP010672-PA [Anopheles gambiae str. PEST]
gi|116130095|gb|EAA07051.3| AGAP010672-PA [Anopheles gambiae str. PEST]
Length = 175
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 49/74 (66%), Gaps = 4/74 (5%)
Query: 26 RTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAY 85
RTI +KPV A V E H RN RL RP SPHLTIY Q+TS+LSITHR TG+ALT Y
Sbjct: 32 RTIVLKPVQAD--VRPGESHDDRNARLKRPQSPHLTIYSFQLTSMLSITHRFTGLALTGY 89
Query: 86 --ALGLAGVGLTTD 97
ALGL + + D
Sbjct: 90 ITALGLGALAMPHD 103
>gi|332373648|gb|AEE61965.1| unknown [Dendroctonus ponderosae]
Length = 176
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 20 RLLPHIRTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTG 79
R+L RT+TIK AP P E H RN RL RP SPHLTIYK Q+TS+LSI+HR TG
Sbjct: 23 RVLSQARTVTIK--CAPAVAPRDESHDERNMRLVRPQSPHLTIYKPQLTSMLSISHRATG 80
Query: 80 VALTAYALGLAGVGLTTD 97
+ LT Y + + + D
Sbjct: 81 MVLTGYTVLFSMAAVYLD 98
>gi|240848787|ref|NP_001155673.1| succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like
[Acyrthosiphon pisum]
gi|239788025|dbj|BAH70709.1| ACYPI006695 [Acyrthosiphon pisum]
Length = 175
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 27 TITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYA 86
T+ +K V G S+E H +N RL RP+SPHL IYK Q+T++LSITHRGTGVAL+
Sbjct: 30 TMQVKTVQEVEG-KSQETHDDKNNRLNRPMSPHLAIYKPQLTTILSITHRGTGVALSGVT 88
Query: 87 LGLAGVGLTTDINSVV 102
GL + + TD+ + V
Sbjct: 89 AGLGALFIFTDLPTFV 104
>gi|91077182|ref|XP_972413.1| PREDICTED: similar to succinate dehydrogenase [Tribolium castaneum]
gi|270002816|gb|EEZ99263.1| hypothetical protein TcasGA2_TC000992 [Tribolium castaneum]
Length = 173
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 63/108 (58%), Gaps = 6/108 (5%)
Query: 1 MNSIFKLST--LCNPIASSHLRLLPHIRTITIKPVAAPTGVPSKEGHAVRNERLGRPLSP 58
M +IF+L + + + + L +L +R +T+K A P GH RN +LGRP SP
Sbjct: 1 MAAIFRLGNRQILSQLRNEKLGMLSLVRPVTLK--AQPATKEIDIGHDERNMQLGRPQSP 58
Query: 59 HLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVPTYL 106
HLTIY Q+TS+LSITHR TG+ L YA+ + G G + +P YL
Sbjct: 59 HLTIYSFQLTSMLSITHRATGMMLAGYAI-MWGTGAVV-LPDTIPHYL 104
>gi|91077184|ref|XP_972464.1| PREDICTED: similar to succinate dehydrogenase [Tribolium
castaneum]
gi|270002817|gb|EEZ99264.1| hypothetical protein TcasGA2_TC000993 [Tribolium castaneum]
Length = 172
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 1 MNSIFKLSTLCNPIA-SSHLRLLPHIRTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPH 59
M++IF+L+ + ++ LL +R +T+KP AP GH RN +LGRP SPH
Sbjct: 1 MSAIFRLANRQTALKFKTNFGLLSLVRPVTLKPQPAPK--EEDLGHDARNMKLGRPQSPH 58
Query: 60 LTIYKLQITSVLSITHRGTGVALTAYALGLA 90
LTIY Q+TS+LSI+HR TG+ LT Y + L
Sbjct: 59 LTIYAPQMTSMLSISHRATGMILTFYTIVLG 89
>gi|290560974|gb|ADD37889.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
[Lepeophtheirus salmonis]
Length = 173
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 59/89 (66%), Gaps = 9/89 (10%)
Query: 22 LPHI--RTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTG 79
LP+I R+I++K + P KE + +N+RL RPLSPHLTIYK Q+TS+LSITHRGTG
Sbjct: 24 LPNIGLRSISLKSMTQEEVAP-KESYWDKNKRLNRPLSPHLTIYKPQLTSMLSITHRGTG 82
Query: 80 VALTA--YALGLAGVGLTTDINSVVPTYL 106
+ LT YA GL L ++ PT+L
Sbjct: 83 IFLTGVVYAGGLIPFLLPSNF----PTFL 107
>gi|225713156|gb|ACO12424.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
precursor [Lepeophtheirus salmonis]
Length = 173
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 59/89 (66%), Gaps = 9/89 (10%)
Query: 22 LPHI--RTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTG 79
LP+I R+I++K + P KE + +N+RL RPLSPHLTIYK Q+TS+LSITHRGTG
Sbjct: 24 LPNIGLRSISLKSMTQEEVAP-KESYWDKNKRLNRPLSPHLTIYKPQLTSMLSITHRGTG 82
Query: 80 VALTA--YALGLAGVGLTTDINSVVPTYL 106
+ LT YA GL L ++ PT+L
Sbjct: 83 IFLTGVVYAGGLIPFLLPSNF----PTFL 107
>gi|225713228|gb|ACO12460.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
precursor [Lepeophtheirus salmonis]
Length = 173
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 59/89 (66%), Gaps = 9/89 (10%)
Query: 22 LPHI--RTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTG 79
LP+I R+I++K + P KE + +N+RL RPLSPHLTIYK Q+TS+LSITHRGTG
Sbjct: 24 LPNIGLRSISLKSMTQEEVAP-KESYWDKNKRLNRPLSPHLTIYKPQLTSMLSITHRGTG 82
Query: 80 VALTA--YALGLAGVGLTTDINSVVPTYL 106
+ LT YA GL L ++ PT+L
Sbjct: 83 IFLTGVVYAGGLIPFLLPSNF----PTFL 107
>gi|157120010|ref|XP_001653486.1| succinate dehydrogenase [Aedes aegypti]
gi|94468558|gb|ABF18128.1| mitochondrial succinate dehydrogenase cytochrome b subunit [Aedes
aegypti]
gi|108875100|gb|EAT39325.1| AAEL008871-PA [Aedes aegypti]
Length = 171
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 25 IRTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
+RT+ +KPV P P E H RN RL RP SPHLTIY Q+TS+LSITHR TG+AL
Sbjct: 27 VRTVVLKPVQ-PDNRPG-ESHDDRNARLQRPQSPHLTIYAPQLTSMLSITHRMTGMALAG 84
Query: 85 YA--LGLAGVGLTTD 97
YA +GL + L D
Sbjct: 85 YATMMGLGALALPHD 99
>gi|312375419|gb|EFR22798.1| hypothetical protein AND_14194 [Anopheles darlingi]
Length = 192
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
Query: 26 RTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAY 85
RTI +KPV + E H RN RL RP SPHLTIY Q+TS LSITHR TG+ALT Y
Sbjct: 35 RTIVLKPVKSDE--RPGESHDDRNARLKRPQSPHLTIYSFQLTSTLSITHRFTGLALTGY 92
Query: 86 --ALGLAGVGLTTD 97
ALGL + + D
Sbjct: 93 ITALGLGALVMPHD 106
>gi|242021634|ref|XP_002431249.1| succinate dehydrogenase, cytochrome B560 subunit [Pediculus
humanus corporis]
gi|212516503|gb|EEB18511.1| succinate dehydrogenase, cytochrome B560 subunit [Pediculus
humanus corporis]
Length = 220
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 26 RTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAY 85
RT+T+KP A + EGH RN RL RP SPHLTIYK ++ +VLSI+HR TG+ L Y
Sbjct: 8 RTVTLKPRPAQIAT-TNEGHDERNMRLCRPTSPHLTIYKFELPAVLSISHRFTGIILGGY 66
Query: 86 ALGLAGVGL 94
A+ A V L
Sbjct: 67 AVTFATVSL 75
>gi|307188808|gb|EFN73391.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
[Camponotus floridanus]
Length = 152
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 49/61 (80%), Gaps = 2/61 (3%)
Query: 33 VAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGV 92
V+ P+G+ + E H +N+RL RP+SPHLTIY++Q+TSVLS+THR TG+ L +YA+ L G+
Sbjct: 13 VSNPSGI-TCESHDEKNKRLKRPMSPHLTIYEIQLTSVLSVTHRTTGIMLASYAMFL-GL 70
Query: 93 G 93
G
Sbjct: 71 G 71
>gi|270268651|gb|ACZ65867.1| ENSANGP00000017418-like protein [Nasonia longicornis]
gi|270268653|gb|ACZ65868.1| ENSANGP00000017418-like protein [Nasonia longicornis]
gi|270268655|gb|ACZ65869.1| ENSANGP00000017418-like protein [Nasonia longicornis]
gi|270268657|gb|ACZ65870.1| ENSANGP00000017418-like protein [Nasonia longicornis]
gi|270268659|gb|ACZ65871.1| ENSANGP00000017418-like protein [Nasonia longicornis]
gi|270268661|gb|ACZ65872.1| ENSANGP00000017418-like protein [Nasonia longicornis]
gi|270268663|gb|ACZ65873.1| ENSANGP00000017418-like protein [Nasonia longicornis]
gi|270268665|gb|ACZ65874.1| ENSANGP00000017418-like protein [Nasonia giraulti]
gi|270268667|gb|ACZ65875.1| ENSANGP00000017418-like protein [Nasonia giraulti]
gi|270268669|gb|ACZ65876.1| ENSANGP00000017418-like protein [Nasonia giraulti]
gi|270268671|gb|ACZ65877.1| ENSANGP00000017418-like protein [Nasonia giraulti]
gi|270268673|gb|ACZ65878.1| ENSANGP00000017418-like protein [Nasonia giraulti]
gi|270268675|gb|ACZ65879.1| ENSANGP00000017418-like protein [Nasonia giraulti]
Length = 101
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 43/51 (84%), Gaps = 1/51 (1%)
Query: 43 EGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVG 93
E H +N RL RPLSPHLTIY+LQ+TS+LS+THRGTG+ L++YA+ L G+G
Sbjct: 45 ETHDEKNMRLKRPLSPHLTIYQLQLTSMLSVTHRGTGIVLSSYAMIL-GLG 94
>gi|195389516|ref|XP_002053422.1| GJ23871 [Drosophila virilis]
gi|194151508|gb|EDW66942.1| GJ23871 [Drosophila virilis]
Length = 170
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 59/94 (62%), Gaps = 5/94 (5%)
Query: 8 STLC-NPIASSHLRLLPHIRTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQ 66
STL +P LR+ R +++K V+ + + E +NERLGR +SPHLTIYK Q
Sbjct: 5 STLVRSPALRQGLRVAAATRQVSLKVVSVGSTIKD-ESFFEKNERLGRQMSPHLTIYKPQ 63
Query: 67 ITSVLSITHRGTGVALTAYALGLAGVGLTTDINS 100
+TS+LSI HRGTG+AL +G+ G+GL I S
Sbjct: 64 LTSMLSIMHRGTGLAL---GIGVWGLGLGALIAS 94
>gi|195452088|ref|XP_002073207.1| GK13274 [Drosophila willistoni]
gi|194169292|gb|EDW84193.1| GK13274 [Drosophila willistoni]
Length = 174
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 63/104 (60%), Gaps = 4/104 (3%)
Query: 2 NSIFKLSTLCNPIASSHLRLLPHI-RTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHL 60
NS F L+ A+ LL R +++K V + V E + +NERLGR +SPHL
Sbjct: 3 NSEFALTNTITRSAALRQGLLAAANRQVSLKVVPVESTVKD-ESYFEKNERLGRKVSPHL 61
Query: 61 TIYKLQITSVLSITHRGTGVAL--TAYALGLAGVGLTTDINSVV 102
TIY+ Q+TS+LSITHRGTG+AL +ALGL + + DI+ V
Sbjct: 62 TIYQPQLTSILSITHRGTGMALGVGVWALGLGALISSHDISHYV 105
>gi|270268641|gb|ACZ65862.1| ENSANGP00000017418-like protein [Nasonia vitripennis]
gi|270268643|gb|ACZ65863.1| ENSANGP00000017418-like protein [Nasonia vitripennis]
gi|270268645|gb|ACZ65864.1| ENSANGP00000017418-like protein [Nasonia vitripennis]
gi|270268647|gb|ACZ65865.1| ENSANGP00000017418-like protein [Nasonia vitripennis]
gi|270268649|gb|ACZ65866.1| ENSANGP00000017418-like protein [Nasonia vitripennis]
Length = 101
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 43/51 (84%), Gaps = 1/51 (1%)
Query: 43 EGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVG 93
E H +N RL RPLSPHLTIY+LQ+TS+LS+THRGTG+ L++YA+ L G+G
Sbjct: 45 ETHDEKNMRLKRPLSPHLTIYQLQLTSMLSVTHRGTGIVLSSYAMIL-GLG 94
>gi|283135232|ref|NP_001164371.1| succinate dehydrogenase cytochrome b560 subunit, mitochondrial
[Nasonia vitripennis]
Length = 175
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 43/51 (84%), Gaps = 1/51 (1%)
Query: 43 EGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVG 93
E H +N RL RPLSPHLTIY+LQ+TS+LS+THRGTG+ L++YA+ L G+G
Sbjct: 45 ETHDEKNMRLKRPLSPHLTIYQLQLTSMLSVTHRGTGIVLSSYAMIL-GLG 94
>gi|225717610|gb|ACO14651.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
precursor [Caligus clemensi]
Length = 173
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Query: 25 IRTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
+R++++KPV+ P V KE +N+RL RP+SPHLTIYK Q+TS+LSI+HR +G+ LTA
Sbjct: 29 LRSVSMKPVS-PEAVAPKESFWDKNKRLNRPMSPHLTIYKPQLTSMLSISHRISGMYLTA 87
>gi|289742765|gb|ADD20130.1| succinate dehydrogenase cytochrome b subunit [Glossina morsitans
morsitans]
Length = 173
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 52/77 (67%), Gaps = 3/77 (3%)
Query: 26 RTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA- 84
R + +K V T V KE +N RLGR +SPHLTIY+ Q+TS+LS+THRGTG+ LTA
Sbjct: 27 RHVAMKIVPVDT-VTKKETFFEKNARLGREMSPHLTIYQPQLTSLLSVTHRGTGMVLTAG 85
Query: 85 -YALGLAGVGLTTDINS 100
+ALGLA + DI +
Sbjct: 86 VWALGLAALISPQDIGN 102
>gi|289742767|gb|ADD20131.1| succinate dehydrogenase cytochrome b subunit [Glossina morsitans
morsitans]
Length = 173
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 52/77 (67%), Gaps = 3/77 (3%)
Query: 26 RTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA- 84
R + +K V T V KE +N RLGR +SPHLTIY+ Q+TS+LS+THRGTG+ LTA
Sbjct: 27 RHVAMKIVPVDT-VTKKETFFEKNARLGREMSPHLTIYQPQLTSLLSVTHRGTGMVLTAG 85
Query: 85 -YALGLAGVGLTTDINS 100
+ALGLA + DI +
Sbjct: 86 VWALGLAALISPQDIGN 102
>gi|170050185|ref|XP_001859594.1| mitochondrial succinate dehydrogenase cytochrome b subunit [Culex
quinquefasciatus]
gi|167871715|gb|EDS35098.1| mitochondrial succinate dehydrogenase cytochrome b subunit [Culex
quinquefasciatus]
Length = 171
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
Query: 26 RTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAY 85
RT+ +K V A E H RN RL RP SPHLTIY Q+T+VLSITHR TG+AL Y
Sbjct: 28 RTVVLKTVQADN--RPGESHDDRNARLQRPQSPHLTIYSFQLTAVLSITHRMTGMALAGY 85
Query: 86 --ALGLAGVGLTTD 97
ALGL + + D
Sbjct: 86 ATALGLGALAMPHD 99
>gi|195038233|ref|XP_001990564.1| GH19420 [Drosophila grimshawi]
gi|193894760|gb|EDV93626.1| GH19420 [Drosophila grimshawi]
Length = 171
Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 26 RTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAY 85
R +++K V+ + E + +NERLGR +SPHLTIYK Q+TS+LSI HRGTG+AL
Sbjct: 25 RQVSLKVVSVGS-TNKDESYFEKNERLGREMSPHLTIYKPQLTSMLSIMHRGTGLAL--- 80
Query: 86 ALGLAGVGLTTDINS 100
+G+ G+GL I S
Sbjct: 81 GMGVWGLGLGALIAS 95
>gi|194743886|ref|XP_001954429.1| GF18258 [Drosophila ananassae]
gi|190627466|gb|EDV42990.1| GF18258 [Drosophila ananassae]
Length = 152
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 52/76 (68%), Gaps = 3/76 (3%)
Query: 26 RTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA- 84
R +++K V+ + +E +NERLGR LSPHLTIY Q+TS+LSI HRGTG+AL A
Sbjct: 6 RQVSLKVVSVGS-TQKEETFFEKNERLGRKLSPHLTIYSPQLTSMLSIMHRGTGLALGAG 64
Query: 85 -YALGLAGVGLTTDIN 99
+ALG+ + + DIN
Sbjct: 65 VWALGVGALISSHDIN 80
>gi|357630734|gb|EHJ78667.1| hypothetical protein KGM_04144 [Danaus plexippus]
Length = 180
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
Query: 40 PSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAY--ALGLAGVGLTTD 97
P +E H ++NERL RPLSPHLTI + Q+TS+LSI+HR G+ L+ Y ALG+ + L D
Sbjct: 47 PKEEHHDIKNERLKRPLSPHLTIIEYQLTSILSISHRFAGMILSGYATALGVGALVLPND 106
Query: 98 INSVV 102
I+ +
Sbjct: 107 ISHYI 111
>gi|332020713|gb|EGI61118.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
[Acromyrmex echinatior]
Length = 154
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 42/51 (82%), Gaps = 1/51 (1%)
Query: 43 EGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVG 93
E H +N RL RPLSPHLTIY++Q+T++LSITHR TG+ L++YA+ L G+G
Sbjct: 24 ESHDEKNMRLKRPLSPHLTIYQVQLTTLLSITHRTTGIILSSYAMFL-GLG 73
>gi|328785048|ref|XP_393056.2| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial [Apis mellifera]
Length = 153
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%), Gaps = 3/63 (4%)
Query: 31 KPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLA 90
KP+ T + E H +N RL RPLSPHLTIY++Q+T+ LSITHR TG+ L++YA+ L
Sbjct: 34 KPLFKETTIC--ETHDEKNLRLKRPLSPHLTIYQIQLTAFLSITHRTTGMILSSYAM-LF 90
Query: 91 GVG 93
G+G
Sbjct: 91 GIG 93
>gi|225717882|gb|ACO14787.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
precursor [Caligus clemensi]
Length = 173
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Query: 25 IRTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
+R++++K V+ P V KE +N+RL RP+SPHLTIYK Q+TS+LSI+HR +G+ LTA
Sbjct: 29 LRSVSMKSVS-PEAVAPKESFWDKNKRLNRPMSPHLTIYKPQLTSMLSISHRISGMYLTA 87
>gi|340724505|ref|XP_003400622.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like [Bombus terrestris]
Length = 176
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Query: 37 TGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVG 93
TG E H +N RL RP+SPHL+IY++Q+TS LSITHR TG+ L++YA+ L G+G
Sbjct: 40 TGSTICETHDEKNMRLKRPMSPHLSIYQIQLTSFLSITHRTTGMILSSYAM-LLGIG 95
>gi|322794003|gb|EFZ17241.1| hypothetical protein SINV_07470 [Solenopsis invicta]
Length = 148
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Query: 43 EGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVG 93
E H +N RL RPLSPHL+IY++Q+T+VLSITHR TG+ L +YA+ L G+G
Sbjct: 18 ESHDEKNMRLKRPLSPHLSIYQVQLTTVLSITHRTTGIMLASYAMFL-GLG 67
>gi|380021914|ref|XP_003694801.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like [Apis florea]
Length = 175
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Query: 43 EGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVG 93
E H +N RL RPLSPHLTIY++Q+T+ LSITHR TG+ L++YA+ L G+G
Sbjct: 45 ETHDEKNLRLKRPLSPHLTIYQIQLTAFLSITHRTTGMILSSYAM-LFGIG 94
>gi|350424987|ref|XP_003493977.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like [Bombus impatiens]
Length = 176
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Query: 37 TGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVG 93
TG E H +N RL RP+SPHL+IY++Q+T+ LSITHR TG+ L++YA+ L G+G
Sbjct: 40 TGSTICETHDEKNMRLKRPMSPHLSIYQIQLTAFLSITHRTTGMILSSYAM-LLGIG 95
>gi|390359912|ref|XP_782812.3| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like, partial [Strongylocentrotus
purpuratus]
Length = 130
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 37/44 (84%), Gaps = 2/44 (4%)
Query: 49 NERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA--YALGLA 90
N+RL RP+SPHLTIY Q+TS+LSITHRGTGV LT YALGL+
Sbjct: 37 NKRLNRPMSPHLTIYSPQVTSMLSITHRGTGVGLTVGIYALGLS 80
>gi|383854646|ref|XP_003702831.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like [Megachile rotundata]
Length = 152
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Query: 43 EGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVG 93
E H +N RL RP+SPHLTIY++Q+TS+LSITHR TG+ L+ YA+ + G+G
Sbjct: 43 ETHDEKNMRLKRPMSPHLTIYQVQLTSLLSITHRTTGIILSTYAM-VFGLG 92
>gi|346471673|gb|AEO35681.1| hypothetical protein [Amblyomma maculatum]
Length = 173
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 15 ASSHLRLLPHIRTITIKPVA--APTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLS 72
A S LR + T + P++ +P + E +N+ L RPLSPHL+IY+LQ+ VLS
Sbjct: 13 ALSLLRPAASLPTACLAPMSGLSPKQAEATERFFNKNKSLKRPLSPHLSIYELQMNMVLS 72
Query: 73 ITHRGTGVALTAYALGL 89
+THRGTG ALTA+ G+
Sbjct: 73 VTHRGTGCALTAFVYGM 89
>gi|196003862|ref|XP_002111798.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190585697|gb|EDV25765.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 139
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 39/50 (78%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLA 90
S++ +N+RL RP+SPHLTIYK Q+TS++SITHR +G+ L+AYA A
Sbjct: 8 SEDNFFKKNKRLNRPMSPHLTIYKPQLTSMMSITHRASGMILSAYAATFA 57
>gi|195111370|ref|XP_002000252.1| GI22625 [Drosophila mojavensis]
gi|193916846|gb|EDW15713.1| GI22625 [Drosophila mojavensis]
Length = 152
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
Query: 26 RTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAY 85
R +++K V+ + + E +N+RLGR +SPHLTIYK Q+TS+LS+ HRGTG+ L
Sbjct: 6 RQVSLKVVSVGSTIKD-ETFFEKNQRLGREMSPHLTIYKPQLTSLLSVMHRGTGLVL--- 61
Query: 86 ALGLAGVGL 94
LG+ G+G+
Sbjct: 62 GLGVWGLGI 70
>gi|389610213|dbj|BAM18718.1| succinate dehydrogenase C [Papilio xuthus]
Length = 180
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 40 PSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYA--LGLAGVGLTTD 97
P E + +N RL RPLSPHLTIY Q+TS+LSITHR G+ L+ YA LG+ + L D
Sbjct: 47 PKPEHYDDKNARLKRPLSPHLTIYAPQLTSILSITHRTAGIILSGYASVLGIGALVLPHD 106
Query: 98 INSVV 102
++ +
Sbjct: 107 VSHYI 111
>gi|390179514|ref|XP_003736918.1| GA19764 [Drosophila pseudoobscura pseudoobscura]
gi|388859883|gb|EIM52991.1| GA19764 [Drosophila pseudoobscura pseudoobscura]
Length = 171
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Query: 26 RTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL--T 83
R ++K V+ + + E + +N RLGR LSPHL+IY+ Q+TS+LS+ HRGTG+AL
Sbjct: 25 RQASMKVVSVGSTIKD-ETYFEKNARLGRELSPHLSIYQPQLTSILSVMHRGTGMALGVG 83
Query: 84 AYALGLAGVGLTTDINSVV 102
+ALGL + + DI+ V
Sbjct: 84 VWALGLGALISSHDISHYV 102
>gi|195157732|ref|XP_002019750.1| GL12041 [Drosophila persimilis]
gi|194116341|gb|EDW38384.1| GL12041 [Drosophila persimilis]
Length = 152
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Query: 26 RTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL--T 83
R ++K V+ + + E + +N RLGR LSPHL+IY+ Q+TS+LS+ HRGTG+AL
Sbjct: 6 RQASMKVVSVGSTIKD-ETYFEKNARLGRELSPHLSIYQPQLTSILSVMHRGTGMALGVG 64
Query: 84 AYALGLAGVGLTTDINSVV 102
+ALGL + + DI+ V
Sbjct: 65 VWALGLGALISSHDISHYV 83
>gi|442759305|gb|JAA71811.1| Putative succinate dehydrogenase cytochrome b subunit [Ixodes
ricinus]
Length = 173
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 45/66 (68%), Gaps = 4/66 (6%)
Query: 29 TIKPVAAPTG--VPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHR--GTGVALTA 84
+ P++A TG P+ +N++L RPLSPHLTIY+ QIT++LSITHR G G+ +
Sbjct: 27 CLAPMSAATGGQAPASAEFFQKNKKLQRPLSPHLTIYEPQITTMLSITHRVTGCGLGVCV 86
Query: 85 YALGLA 90
Y LGLA
Sbjct: 87 YGLGLA 92
>gi|21064663|gb|AAM29561.1| RH04289p [Drosophila melanogaster]
Length = 171
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 8 STLCNPIASSHLRLLPHIRTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQI 67
S + +P L++ R +++K V+ E +NERLGR LSPHLTIY+ Q+
Sbjct: 7 SLIRSPALRQGLQMAAASRQVSMKVVSVAE-TQKDESFFEKNERLGRELSPHLTIYQPQL 65
Query: 68 TSVLSITHRGTGVA 81
TS+LSI HRGTG+A
Sbjct: 66 TSMLSICHRGTGLA 79
>gi|320168382|gb|EFW45281.1| succinate dehydrogenase cytochrome b subunit [Capsaspora
owczarzaki ATCC 30864]
Length = 159
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 5/58 (8%)
Query: 35 APTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGV 92
+P +P E +N+ LGRPLSPHLTIY+ Q+TSVLSITHR TG A+T +A+ A V
Sbjct: 25 SPMDLPFFE----KNKALGRPLSPHLTIYRPQLTSVLSITHRATGAAMT-FAISTAAV 77
>gi|45550736|ref|NP_650047.3| succinate dehydrogenase C, isoform A [Drosophila melanogaster]
gi|442618548|ref|NP_001262472.1| succinate dehydrogenase C, isoform B [Drosophila melanogaster]
gi|195329931|ref|XP_002031662.1| GM26120 [Drosophila sechellia]
gi|17946639|gb|AAL49350.1| RH44771p [Drosophila melanogaster]
gi|45446453|gb|AAF54602.2| succinate dehydrogenase C, isoform A [Drosophila melanogaster]
gi|194120605|gb|EDW42648.1| GM26120 [Drosophila sechellia]
gi|440217315|gb|AGB95854.1| succinate dehydrogenase C, isoform B [Drosophila melanogaster]
Length = 171
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 8 STLCNPIASSHLRLLPHIRTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQI 67
S + +P L++ R +++K V+ E +NERLGR LSPHLTIY+ Q+
Sbjct: 7 SLIRSPALRQGLQMAAASRPVSMKVVSVAE-TQKDESFFEKNERLGRELSPHLTIYQPQL 65
Query: 68 TSVLSITHRGTGVA 81
TS+LSI HRGTG+A
Sbjct: 66 TSMLSICHRGTGLA 79
>gi|346472803|gb|AEO36246.1| hypothetical protein [Amblyomma maculatum]
Length = 173
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 1 MNSIFKLSTLCNPIASSHLRLLPHIRTITIKPVA--APTGVPSKEGHAVRNERLGRPLSP 58
M +L+ NP+ S LR + + T + P++ +P V + + +N+ L RPLSP
Sbjct: 1 MAYAMRLAKRANPL--SLLRPMTALPTACLAPMSGMSPKQVAATDNFFNKNKSLKRPLSP 58
Query: 59 HLTIYKLQITSVLSITHRGTGVALTAYALGL 89
HL+IY Q+TS+LS+THR TG + A+ GL
Sbjct: 59 HLSIYAPQMTSMLSLTHRATGCGMAAFVYGL 89
>gi|195499973|ref|XP_002097176.1| GE24640 [Drosophila yakuba]
gi|194183277|gb|EDW96888.1| GE24640 [Drosophila yakuba]
Length = 171
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 8 STLCNPIASSHLRLLPHIRTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQI 67
S + +P L++ R +++K V+ E +NERLGR LSPHLTIY+ Q+
Sbjct: 7 SLIRSPALRQGLQMAAASRPVSMKVVSVAE-TQKDESFFEKNERLGRKLSPHLTIYQPQL 65
Query: 68 TSVLSITHRGTGVA 81
TS+LSI HRGTG+A
Sbjct: 66 TSMLSICHRGTGLA 79
>gi|195571827|ref|XP_002103902.1| GD20679 [Drosophila simulans]
gi|194199829|gb|EDX13405.1| GD20679 [Drosophila simulans]
Length = 152
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 26 RTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVA 81
R +++K V+ E +NERLGR LSPHLTIY+ Q+TS+LSI HRGTG+A
Sbjct: 6 RPVSMKVVSVAE-TQKDESFFEKNERLGRELSPHLTIYQPQLTSMLSICHRGTGLA 60
>gi|427786471|gb|JAA58687.1| Putative succinate dehydrogenase cytochrome b subunit
[Rhipicephalus pulchellus]
Length = 173
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 5/76 (6%)
Query: 27 TITIKPVAA--PTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
T + P++A P + E +N+ L RPLSPHL+IY Q+TS+LS+THR TG A+
Sbjct: 25 TACLAPMSAMSPKQAEATEYFFNKNKSLKRPLSPHLSIYAPQMTSMLSLTHRATGCAM-- 82
Query: 85 YALGLAGVGLTTDINS 100
A+GL G+GL + S
Sbjct: 83 -AVGLYGMGLMPFVCS 97
>gi|38048273|gb|AAR10039.1| similar to Drosophila melanogaster CG6666, partial [Drosophila
yakuba]
Length = 152
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 26 RTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVA 81
R +++K V+ E +NERLGR LSPHLTIY+ Q+TS+LSI HRGTG+A
Sbjct: 6 RPVSMKVVSVAE-TQKDESFFEKNERLGRKLSPHLTIYQPQLTSMLSICHRGTGLA 60
>gi|194902122|ref|XP_001980598.1| GG17240 [Drosophila erecta]
gi|190652301|gb|EDV49556.1| GG17240 [Drosophila erecta]
Length = 152
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 26 RTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVA 81
R +++K V+ E +NERLGR LSPHLTIY+ Q+TS+LSI HRGTG+A
Sbjct: 6 RPVSMKVVSVAE-TQKDESFFEKNERLGRKLSPHLTIYQPQLTSMLSICHRGTGLA 60
>gi|307203720|gb|EFN82680.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
[Harpegnathos saltator]
Length = 140
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 43 EGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVG 93
E H RN RL RP+SPHLTIY+ + ++LSITHR TG+ L++YA+ L G+G
Sbjct: 10 ETHDERNMRLKRPMSPHLTIYEFPLPAMLSITHRTTGIILSSYAMFL-GLG 59
>gi|427786469|gb|JAA58686.1| Putative succinate dehydrogenase cytochrome b subunit
[Rhipicephalus pulchellus]
Length = 173
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 5/76 (6%)
Query: 27 TITIKPVAA--PTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
T + P++A P + E +N+ L RPLSPHL+IY Q+TS+LS+THR TG A+
Sbjct: 25 TACLAPMSAMSPKQAEATEYFFNKNKSLKRPLSPHLSIYAPQMTSMLSLTHRATGCAM-- 82
Query: 85 YALGLAGVGLTTDINS 100
A+GL G+GL + S
Sbjct: 83 -AVGLYGMGLMPFMCS 97
>gi|391336354|ref|XP_003742546.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like [Metaseiulus occidentalis]
Length = 166
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 32 PVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLA 90
P+ A + +PS E + + L RPLSPHL+IYK Q+T+VLSI+HR +G+ LTA G+A
Sbjct: 25 PLRASSSIPS-EAFFEKQKALKRPLSPHLSIYKPQLTTVLSISHRISGIGLTAVVYGMA 82
>gi|321470744|gb|EFX81719.1| hypothetical protein DAPPUDRAFT_49817 [Daphnia pulex]
Length = 169
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 27 TITIKPVAAPTGVP-SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAY 85
T IK V A P S E +N+RL RP+SPHL+IY+ Q LSITHR TG+A
Sbjct: 23 TFGIKSVEANRAKPLSNENFEDKNKRLQRPISPHLSIYQFQSNMALSITHRFTGLAQNGL 82
Query: 86 ALGLA 90
GLA
Sbjct: 83 MYGLA 87
>gi|432911321|ref|XP_004078622.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like [Oryzias latipes]
Length = 169
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 34 AAPTGVPSKE---GHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLA 90
AAP G +KE +N RL RP+SPHL IYK + ++SITHRGTG+AL+ A
Sbjct: 27 AAPMGTTAKEEMNKFWAKNSRLNRPMSPHLAIYKWSVPMLMSITHRGTGLALSGGISAFA 86
Query: 91 GVGLTTDINSVVPTYL 106
L N P YL
Sbjct: 87 AAALVLPGN--YPYYL 100
>gi|325303890|tpg|DAA34619.1| TPA_inf: truncated succinate dehydrogenase cytochrome b subunit
[Amblyomma variegatum]
Length = 173
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%)
Query: 35 APTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGL 89
+P + E +N+ L RPLSPHL IYK QIT VLS+THR TG+ +TA+ G+
Sbjct: 35 SPRQEAATEHFFKKNKSLNRPLSPHLGIYKQQITMVLSLTHRVTGIGMTAFVYGM 89
>gi|308323411|gb|ADO28842.1| mitochondrial succinate dehydrogenase cytochrome b560 subunit
[Ictalurus punctatus]
Length = 166
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 36/54 (66%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKE---GHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KE +N RL RPLSPH+TIY+ + ++SITHRGTGV L+A
Sbjct: 24 AVPMGTSAKEEMDKFWAKNSRLNRPLSPHITIYRWSVPMMMSITHRGTGVVLSA 77
>gi|325089641|gb|EGC42951.1| succinate dehydrogenase cytochrome b560 subunit [Ajellomyces
capsulatus H88]
Length = 194
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 22 LPHIRTITIKPVA--APTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTG 79
L H + I P+A A + PS +R +RL RP+SPH++IY+ QITSVLS+ HR TG
Sbjct: 31 LTHAKHIHASPIAQAARSSKPSDPNDLLRKQRLNRPVSPHISIYRPQITSVLSLLHRNTG 90
Query: 80 VALT 83
+ L+
Sbjct: 91 LLLS 94
>gi|240279376|gb|EER42881.1| succinate dehydrogenase cytochrome b560 subunit [Ajellomyces
capsulatus H143]
Length = 188
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 22 LPHIRTITIKPVA--APTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTG 79
L H + I P+A A + PS +R +RL RP+SPH++IY+ QITSVLS+ HR TG
Sbjct: 25 LTHAKHIHASPIAQAARSSKPSDPNDLLRKQRLNRPVSPHISIYRPQITSVLSLLHRNTG 84
Query: 80 VALT 83
+ L+
Sbjct: 85 LLLS 88
>gi|195111348|ref|XP_002000241.1| GI22631 [Drosophila mojavensis]
gi|193916835|gb|EDW15702.1| GI22631 [Drosophila mojavensis]
Length = 229
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 11/82 (13%)
Query: 31 KPVAAPTG---------VPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTG-- 79
KP +APTG V +K + +N +LGR LSPHLTIY+ Q+TSV+SI R +G
Sbjct: 22 KPPSAPTGKLGMRIVPAVQNKLNYDEKNMKLGRALSPHLTIYRKQLTSVMSIFLRASGAT 81
Query: 80 VALTAYALGLAGVGLTTDINSV 101
+ L + +GL + DIN++
Sbjct: 82 LGLAVWIIGLTALLCKLDINAM 103
>gi|260811592|ref|XP_002600506.1| hypothetical protein BRAFLDRAFT_119291 [Branchiostoma floridae]
gi|229285793|gb|EEN56518.1| hypothetical protein BRAFLDRAFT_119291 [Branchiostoma floridae]
Length = 181
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 3/56 (5%)
Query: 33 VAAPTGVPSKEGHAV---RNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAY 85
+AAP ++E A +N + RP+SPHLTIYK Q+T++LSITHRGTG A+ +
Sbjct: 33 LAAPMTTTAQEEMAKFWDKNAQKKRPMSPHLTIYKPQLTAMLSITHRGTGAAMAGF 88
>gi|218847754|ref|NP_001136371.1| succinate dehydrogenase complex, subunit C, integral membrane
protein, 15kDa [Xenopus (Silurana) tropicalis]
gi|163915714|gb|AAI57547.1| LOC496650 protein [Xenopus (Silurana) tropicalis]
Length = 169
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 48 RNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYA--LGLAGVGLTTDINS 100
+N RL RPLSPH+TIYK + +SI+HRGTG+A+TA GLA + L D S
Sbjct: 44 KNTRLNRPLSPHITIYKWSLPMAMSISHRGTGIAMTAGVSLFGLAALVLPGDFAS 98
>gi|56611131|gb|AAH87773.1| LOC496650 protein, partial [Xenopus (Silurana) tropicalis]
Length = 167
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 48 RNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYA--LGLAGVGLTTDINS 100
+N RL RPLSPH+TIYK + +SI+HRGTG+A+TA GLA + L D S
Sbjct: 42 KNTRLNRPLSPHITIYKWSLPMAMSISHRGTGIAMTAGVSLFGLAALVLPGDFAS 96
>gi|138519774|gb|AAI35209.1| LOC496650 protein [Xenopus (Silurana) tropicalis]
Length = 164
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 48 RNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYA--LGLAGVGLTTDINS 100
+N RL RPLSPH+TIYK + +SI+HRGTG+A+TA GLA + L D S
Sbjct: 39 KNTRLNRPLSPHITIYKWSLPMAMSISHRGTGIAMTAGVSLFGLAALVLPGDFAS 93
>gi|195038263|ref|XP_001990579.1| GH19425 [Drosophila grimshawi]
gi|193894775|gb|EDV93641.1| GH19425 [Drosophila grimshawi]
Length = 170
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 49 NERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA--YALGLAGVGLTTDINSV 101
N +LGR LSPHLTIYK+Q+TS +SI R +G L +A+GL G+ DIN +
Sbjct: 14 NMKLGRELSPHLTIYKIQLTSAMSILLRISGFVLGMGFWAIGLMGLFCNMDINEL 68
>gi|348519978|ref|XP_003447506.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like [Oreochromis niloticus]
Length = 169
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 35 APTGVPSKE---GHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
AP G +KE +N RL RP+SPH+TIYK + ++SITHRGTGV L+
Sbjct: 28 APMGSTAKEEMNKFWDKNSRLNRPMSPHITIYKWSVPMMMSITHRGTGVGLSG 80
>gi|410927041|ref|XP_003976976.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like [Takifugu rubripes]
Length = 169
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG---HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
AAP G +KE +N +L RP+SPHLTIYK + ++SI HRGTGV L+
Sbjct: 27 AAPMGTTAKEEMNRFWSKNAKLNRPMSPHLTIYKWSVPMMMSIAHRGTGVGLSG 80
>gi|198456405|ref|XP_002136333.1| GA27966 [Drosophila pseudoobscura pseudoobscura]
gi|198142684|gb|EDY71408.1| GA27966 [Drosophila pseudoobscura pseudoobscura]
Length = 235
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 33/47 (70%)
Query: 48 RNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGL 94
RN RLGR +SP LTIYK Q+TSVLSI R +G ALT + GL GL
Sbjct: 38 RNMRLGRVMSPALTIYKKQLTSVLSILLRMSGFALTLFVWGLGLTGL 84
>gi|209737836|gb|ACI69787.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
precursor [Salmo salar]
gi|303658983|gb|ADM15942.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
precursor [Salmo salar]
Length = 170
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKE---GHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KE +N +L RP+SPH+TIY+ + ++SITHRGTGV L+
Sbjct: 27 AVPMGTTAKEEMNKFWAKNNKLNRPMSPHITIYQWSVPMMMSITHRGTGVGLSG 80
>gi|209738020|gb|ACI69879.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
precursor [Salmo salar]
Length = 170
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKE---GHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KE +N +L RP+SPH+TIY+ + ++SITHRGTGV L+
Sbjct: 27 AVPMGTTAKEEMNKFWAKNNKLNRPMSPHITIYQWSVPMMMSITHRGTGVGLSG 80
>gi|198455255|ref|XP_002138037.1| GA26173 [Drosophila pseudoobscura pseudoobscura]
gi|198133166|gb|EDY68595.1| GA26173 [Drosophila pseudoobscura pseudoobscura]
Length = 332
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 29/47 (61%), Positives = 33/47 (70%)
Query: 48 RNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGL 94
RN RLGR +SP LTIYK Q+TSVLSI R +G ALT + GL GL
Sbjct: 135 RNMRLGRVMSPALTIYKKQLTSVLSILLRMSGFALTLFVWGLGLTGL 181
>gi|48727574|gb|AAT46090.1| integral membrane protein CII-3 [Branchiostoma belcheri
tsingtauense]
Length = 165
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 36/46 (78%), Gaps = 4/46 (8%)
Query: 48 RNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT----AYALGL 89
+N + RP+SPHLTIYK Q+T++LS+THRGTG A+ A+++G+
Sbjct: 51 KNAQKKRPMSPHLTIYKPQLTAMLSMTHRGTGAAMAGCVYAFSMGM 96
>gi|195157702|ref|XP_002019735.1| GL12050 [Drosophila persimilis]
gi|194116326|gb|EDW38369.1| GL12050 [Drosophila persimilis]
Length = 307
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 33/47 (70%)
Query: 48 RNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGL 94
RN RLGR +SP LTIYK Q+TSVLSI R +G ALT + GL GL
Sbjct: 110 RNMRLGRVMSPALTIYKKQLTSVLSILLRMSGFALTLFVWGLGLTGL 156
>gi|167522351|ref|XP_001745513.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775862|gb|EDQ89484.1| predicted protein [Monosiga brevicollis MX1]
Length = 178
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 38 GVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGL 94
G+ + + +N++L RP+SPHLTIY+ + ++LSI+HR +G ALT A+ A +GL
Sbjct: 45 GLTNDQDFFKKNDKLNRPMSPHLTIYRFPLPAILSISHRVSGAALT-MAISAAAIGL 100
>gi|225559635|gb|EEH07917.1| succinate dehydrogenase cytochrome b560 subunit [Ajellomyces
capsulatus G186AR]
Length = 215
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 33/44 (75%)
Query: 40 PSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
PS +R +RL RP+SPH++IY+ QITSVLS+ HR TG+ L+
Sbjct: 72 PSDPNDLLRKQRLNRPVSPHISIYRPQITSVLSLLHRNTGLLLS 115
>gi|225717282|gb|ACO14487.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
precursor [Esox lucius]
Length = 173
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKE---GHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KE +N +L RP+SPH+T+YK + ++SI+HRGTG+ L+A
Sbjct: 27 AVPMGTTAKEEMNKFWAKNNKLNRPMSPHVTVYKWSVPMMMSISHRGTGLGLSA 80
>gi|406989330|gb|EKE09121.1| Succinate dehydrogenase, cytochrome b subunit [uncultured
bacterium]
Length = 136
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 28/36 (77%)
Query: 47 VRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+ E + RPLSPHL IYK QITSVLSI HRGTG+ L
Sbjct: 3 LSQEEINRPLSPHLLIYKPQITSVLSIMHRGTGIVL 38
>gi|449273964|gb|EMC83291.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
[Columba livia]
Length = 271
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
Query: 36 PTGVPSKEGHA---VRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
P G +KE A +N + RPLSPH+TIYK + V+SITHRGTGVAL+
Sbjct: 92 PMGTTAKEEMARFWDKNTKSNRPLSPHVTIYKWSLPMVMSITHRGTGVALS 142
>gi|221220716|gb|ACM09019.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
precursor [Salmo salar]
Length = 170
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG---HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G + E +N +L RP+SPHLTIYK + ++SITHRGTGV L+
Sbjct: 27 AVPMGTTANEEMNTFWAKNNKLNRPVSPHLTIYKWSLPMMMSITHRGTGVGLSG 80
>gi|221219496|gb|ACM08409.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
precursor [Salmo salar]
gi|221219988|gb|ACM08655.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
precursor [Salmo salar]
gi|221221046|gb|ACM09184.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
precursor [Salmo salar]
Length = 170
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG---HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G + E +N +L RP+SPHLTIYK + ++SITHRGTGV L+
Sbjct: 27 AVPMGTTANEEMNTFWAKNNKLNRPVSPHLTIYKWSLPMMMSITHRGTGVGLSG 80
>gi|221220816|gb|ACM09069.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
precursor [Salmo salar]
gi|221221340|gb|ACM09331.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
precursor [Salmo salar]
gi|221221580|gb|ACM09451.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
precursor [Salmo salar]
Length = 170
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG---HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G + E +N +L RP+SPHLTIYK + ++SITHRGTGV L+
Sbjct: 27 AVPMGTTANEEMNTFWAKNNKLNRPVSPHLTIYKWSLPMMMSITHRGTGVGLSG 80
>gi|327351834|gb|EGE80691.1| succinate dehydrogenase cytochrome b560 subunit [Ajellomyces
dermatitidis ATCC 18188]
Length = 293
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 47/87 (54%), Gaps = 15/87 (17%)
Query: 29 TIKPVAAPTGVPSKEG----------HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGT 78
TI P + T P G +R +RL RP+SP+LTIY+ QITSVLSI HR T
Sbjct: 90 TINPTSPATSQPDIAGALGFSTSDPNDLLRKQRLNRPISPNLTIYRPQITSVLSILHRNT 149
Query: 79 GVALTA-----YALGLAGVGLTTDINS 100
G+ ++ +A+ LA L I+S
Sbjct: 150 GLLVSGGFYLFFAVYLASPWLGWHIDS 176
>gi|194902150|ref|XP_001980612.1| GG17249 [Drosophila erecta]
gi|190652315|gb|EDV49570.1| GG17249 [Drosophila erecta]
Length = 269
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Query: 27 TITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYA 86
T+ + P P +P + RN LGR LSPHL+IYK+Q+TS LS R +G AL+ +
Sbjct: 61 TLKVIPFRMPPDLPYDD----RNMLLGRELSPHLSIYKIQLTSTLSAFLRISGFALSVFV 116
Query: 87 --LGLAGVGLTTDINSVV 102
+G+ G+ L D+ +
Sbjct: 117 WIVGIGGLCLQGDMEGFI 134
>gi|57768830|ref|NP_001003523.1| succinate dehydrogenase complex, subunit C, integral membrane
protein [Danio rerio]
gi|50417100|gb|AAH78306.1| Succinate dehydrogenase complex, subunit C, integral membrane
protein [Danio rerio]
Length = 144
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 30/37 (81%)
Query: 48 RNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
+N RL RP+SPH+TIYK + +SI+HRGTG+AL++
Sbjct: 19 KNTRLNRPMSPHMTIYKWSVPMAMSISHRGTGIALSS 55
>gi|119473649|ref|XP_001258700.1| Cytochrome b subunit of succinate dehydrogenase, putative
[Neosartorya fischeri NRRL 181]
gi|119406853|gb|EAW16803.1| Cytochrome b subunit of succinate dehydrogenase, putative
[Neosartorya fischeri NRRL 181]
Length = 183
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 24 HIRTITIKPVAAPTGV--PSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVA 81
H+R T KPVA P V P + +RL RP++PHL+IYK Q+ SV S R TG+
Sbjct: 27 HVRMQTTKPVATPLRVIKPETAQEELARQRLRRPVAPHLSIYKWQVHSVSSALERNTGLL 86
Query: 82 LTA--YALG---LAGVGLTTDINS 100
L Y G L L D++S
Sbjct: 87 LAGSLYLFGTSYLVAPWLGWDLSS 110
>gi|221129025|ref|XP_002164804.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like [Hydra magnipapillata]
Length = 186
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 32/43 (74%)
Query: 42 KEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
EG +N+R+ RPLSPH+TIYK ++ +LS THR TG+A++
Sbjct: 51 NEGFWEKNDRMQRPLSPHITIYKFELPGLLSGTHRFTGLAMSG 93
>gi|239613339|gb|EEQ90326.1| succinate dehydrogenase cytochrome b560 subunit [Ajellomyces
dermatitidis ER-3]
Length = 278
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 15/87 (17%)
Query: 29 TIKPVAAPTGVPSKEG----------HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGT 78
TI P + T P G +R +RL RP+SP+LTIY+ Q+TSVLSI HR T
Sbjct: 90 TINPTSPATSQPDIAGALGFSTSDPNDLLRKQRLNRPISPNLTIYRPQVTSVLSILHRNT 149
Query: 79 GVALTA-----YALGLAGVGLTTDINS 100
G+ ++ +A+ LA L I+S
Sbjct: 150 GLLVSGGFYLFFAVYLASPWLGWHIDS 176
>gi|209731756|gb|ACI66747.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
precursor [Salmo salar]
Length = 170
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKE---GHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KE +N +L RP+SPH+T+Y+ + ++SITHRGTGV L+
Sbjct: 27 AVPMGTTAKEEMNKFWAKNNKLNRPMSPHITVYQRSVPMMMSITHRGTGVGLSG 80
>gi|194743916|ref|XP_001954444.1| GF18264 [Drosophila ananassae]
gi|190627481|gb|EDV43005.1| GF18264 [Drosophila ananassae]
Length = 281
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 36 PTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT--AYALGLAGV 92
P P K G+ RN GR LSPHL+IYKLQ+TS LSI R +G L +ALG++G+
Sbjct: 87 PARDPPKLGYDDRNMMRGRELSPHLSIYKLQLTSGLSICLRISGFVLGVFVWALGISGL 145
>gi|261187750|ref|XP_002620293.1| succinate dehydrogenase cytochrome b560 subunit [Ajellomyces
dermatitidis SLH14081]
gi|239593506|gb|EEQ76087.1| succinate dehydrogenase cytochrome b560 subunit [Ajellomyces
dermatitidis SLH14081]
Length = 188
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 16/88 (18%)
Query: 29 TIKPVAAPTGVPSKEG-----------HAVRNERLGRPLSPHLTIYKLQITSVLSITHRG 77
TI P + T P G +R +RL RP+SP+LTIY+ Q+TSVLSI HR
Sbjct: 17 TINPTSPATSQPDIAGALGFSTSEDPNDLLRKQRLNRPISPNLTIYRPQVTSVLSILHRN 76
Query: 78 TGVALTA-----YALGLAGVGLTTDINS 100
TG+ ++ +A+ LA L I+S
Sbjct: 77 TGLLVSGGFYLFFAVYLASPWLGWHIDS 104
>gi|221219992|gb|ACM08657.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
precursor [Salmo salar]
Length = 170
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 29/37 (78%)
Query: 48 RNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
+N +L RP+SPHLTIYK + ++SITHRGTGV L+
Sbjct: 44 KNNKLNRPVSPHLTIYKWSLPMMMSITHRGTGVGLSG 80
>gi|409083993|gb|EKM84350.1| SDH3 putative [Agaricus bisporus var. burnettii JB137-S8]
Length = 179
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 40 PSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHR--GTGVALTAYALGLAGVGLTTD 97
PS + +RL RP+SPHLTIY+ Q+TSV+SI +R G G+ + Y GLA + T
Sbjct: 46 PSASEGILNKQRLSRPMSPHLTIYQPQLTSVVSIFNRFAGAGLGVLLYGFGLAYLVAPTT 105
Query: 98 INSV 101
+SV
Sbjct: 106 FDSV 109
>gi|426200952|gb|EKV50875.1| succinate dehydrogenase cytochrome b subunit precursor [Agaricus
bisporus var. bisporus H97]
Length = 179
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 40 PSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHR--GTGVALTAYALGLAGVGLTTD 97
PS + +RL RP+SPHLTIY+ Q+TSV+SI +R G G+ + Y GLA + T
Sbjct: 46 PSASEGILNKQRLSRPMSPHLTIYQPQLTSVVSIFNRFAGAGLGVLLYGFGLAYLVAPTT 105
Query: 98 INSV 101
+SV
Sbjct: 106 FDSV 109
>gi|281352142|gb|EFB27726.1| hypothetical protein PANDA_018826 [Ailuropoda melanoleuca]
Length = 144
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG---HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KE +N L RPLSPH+TIY + +SI HRGTGVAL+A
Sbjct: 2 AVPLGTTAKEEMERFWNKNTDLNRPLSPHITIYSWSLPMAMSICHRGTGVALSA 55
>gi|405965053|gb|EKC30481.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
[Crassostrea gigas]
Length = 181
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 43 EGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAG--VGLTTDINS 100
E +N RL RPLSPHL IY ++TS+LS+ HR TG+A+ +A +GL D +S
Sbjct: 50 EEFWEKNRRLNRPLSPHLRIYNPELTSMLSLCHRATGIAMAVTVPFVAATLLGLPGDFSS 109
Query: 101 VV 102
+
Sbjct: 110 YI 111
>gi|195499931|ref|XP_002097158.1| GE24651 [Drosophila yakuba]
gi|194183259|gb|EDW96870.1| GE24651 [Drosophila yakuba]
Length = 265
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 27 TITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYA 86
T+ + P P +P + RN LGR LSPHL+IYK+Q+TS LS R +G L+ +
Sbjct: 61 TLKVIPFRMPPDLPYDD----RNMLLGRELSPHLSIYKIQLTSTLSAFLRISGFVLSVFV 116
Query: 87 --LGLAGVGLTTDINSVV 102
+G+ G+ L D+ +
Sbjct: 117 WIVGIGGLCLQGDMEGFI 134
>gi|410074079|ref|XP_003954622.1| hypothetical protein KAFR_0A00490 [Kazachstania africana CBS
2517]
gi|372461204|emb|CCF55487.1| hypothetical protein KAFR_0A00490 [Kazachstania africana CBS
2517]
Length = 177
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 42/72 (58%), Gaps = 7/72 (9%)
Query: 13 PIASSHLRLLP--HIRTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSV 70
PIA+S LR+LP H + + V AP+ E + R RP+SPHLTIY+ QI V
Sbjct: 16 PIANSQLRILPTQHRFIVYNEKVRAPS-----ESKELVGRRKQRPISPHLTIYEPQIPWV 70
Query: 71 LSITHRGTGVAL 82
LS HR TG+ L
Sbjct: 71 LSALHRITGIYL 82
>gi|21356401|ref|NP_650041.1| CG6629 [Drosophila melanogaster]
gi|7299395|gb|AAF54585.1| CG6629 [Drosophila melanogaster]
gi|19527967|gb|AAL90098.1| AT18465p [Drosophila melanogaster]
gi|220949652|gb|ACL87369.1| CG6629-PA [synthetic construct]
gi|220958876|gb|ACL91981.1| CG6629-PA [synthetic construct]
Length = 261
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 27 TITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYA 86
T+ + P P +P + RN LGR LSPHL+IYK+Q+TS LS R +G L +
Sbjct: 61 TLKVIPFRMPPDLPYDD----RNMLLGRQLSPHLSIYKIQLTSTLSAFLRISGFVLAVFV 116
Query: 87 --LGLAGVGLTTDINSVV 102
+G++G+ L D+ +
Sbjct: 117 WFVGISGLCLQGDMEGFI 134
>gi|195571855|ref|XP_002103916.1| GD20687 [Drosophila simulans]
gi|194199843|gb|EDX13419.1| GD20687 [Drosophila simulans]
Length = 262
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 27 TITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYA 86
T+ + P P +P + RN LGR LSPHL+IYK+Q+TS LS R +G L +
Sbjct: 58 TLKVIPFRMPPDLPYDD----RNMLLGRQLSPHLSIYKIQLTSTLSAFLRISGFVLAVFV 113
Query: 87 --LGLAGVGLTTDINSVV 102
+G++G+ L D+ +
Sbjct: 114 WFVGVSGLCLQGDMEGFI 131
>gi|355718222|gb|AES06198.1| succinate dehydrogenase complex, subunit C, integral membrane
protein, 15kDa [Mustela putorius furo]
Length = 168
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG---HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KE +N L RPLSPH+TIY + +SI HRGTGVAL+A
Sbjct: 27 AVPLGTTAKEEMERFWNKNTDLNRPLSPHITIYSWSLPMAMSICHRGTGVALSA 80
>gi|57111445|ref|XP_536140.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial isoform 2 [Canis lupus familiaris]
Length = 169
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG---HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KE +N L RPLSPH+TIY + +SI HRGTGVAL+A
Sbjct: 27 AVPLGTTAKEEMERFWNKNTDLNRPLSPHITIYSWSLPMAMSICHRGTGVALSA 80
>gi|301786725|ref|XP_002928776.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like isoform 1 [Ailuropoda melanoleuca]
Length = 169
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG---HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KE +N L RPLSPH+TIY + +SI HRGTGVAL+A
Sbjct: 27 AVPLGTTAKEEMERFWNKNTDLNRPLSPHITIYSWSLPMAMSICHRGTGVALSA 80
>gi|195329969|ref|XP_002031681.1| GM26134 [Drosophila sechellia]
gi|194120624|gb|EDW42667.1| GM26134 [Drosophila sechellia]
Length = 264
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 27 TITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYA 86
T+ + P P +P + RN LGR LSPHL+IYK+Q+TS LS R +G L +
Sbjct: 61 TLKVIPFRMPPDLPYDD----RNMLLGRQLSPHLSIYKIQLTSTLSAFLRISGFVLAVFV 116
Query: 87 --LGLAGVGLTTDINSVV 102
+G++G+ L D+ +
Sbjct: 117 WFVGISGLCLQGDMEGYI 134
>gi|321465564|gb|EFX76564.1| hypothetical protein DAPPUDRAFT_36257 [Daphnia pulex]
Length = 126
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 32/47 (68%)
Query: 48 RNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGL 94
+N RL RPLS HL+I+KLQ ++S+THR TGV L GLA V +
Sbjct: 4 KNRRLKRPLSAHLSIHKLQNNMIISMTHRFTGVILCGIPFGLATVAI 50
>gi|402224871|gb|EJU04933.1| hypothetical protein DACRYDRAFT_20514 [Dacryopinax sp. DJM-731 SS1]
Length = 192
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 41/70 (58%), Gaps = 7/70 (10%)
Query: 40 PSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGV----ALTAYALGLAG---V 92
P+ E + +RL RP SPH TIY+ Q+T V SI HR TGV AL A+A+G +
Sbjct: 56 PAGESVILNTQRLKRPSSPHFTIYQPQLTWVASIFHRVTGVGLSLALYAFAIGYLASPVI 115
Query: 93 GLTTDINSVV 102
G+ D SVV
Sbjct: 116 GIPLDSASVV 125
>gi|154281033|ref|XP_001541329.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150411508|gb|EDN06896.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 226
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAG 91
S +R +RL RP+SPH++IY+ QITSVLS+ HR TG+ + L A
Sbjct: 69 SDPNDLLRKQRLNRPVSPHISIYQPQITSVLSLLHRNTGLLSGPFYLFFAA 119
>gi|335286616|ref|XP_003125707.2| PREDICTED: hypothetical protein LOC100524676 [Sus scrofa]
gi|290463150|sp|D0VWV4.2|C560_PIG RecName: Full=Succinate dehydrogenase cytochrome b560 subunit,
mitochondrial; AltName: Full=Succinate-ubiquinone
oxidoreductase cytochrome B large subunit; Short=CYBL;
Flags: Precursor
Length = 169
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG-HAVRNERLG--RPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KE N+ LG RPLSPH+TIY+ + +SI HRGTG+AL+A
Sbjct: 27 AVPLGTTAKEEMERFWNKNLGSNRPLSPHITIYRWSLPMAMSICHRGTGIALSA 80
>gi|53237071|gb|AAH83091.1| Succinate dehydrogenase complex, subunit C, integral membrane
protein [Mus musculus]
Length = 169
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG---HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
AAP G +KE +N RPLSPHLTIYK + LS+ HRG+G+AL+
Sbjct: 27 AAPLGTTAKEKMERFWKKNTSSNRPLSPHLTIYKWSLPMALSVCHRGSGIALSG 80
>gi|213408543|ref|XP_002175042.1| succinate dehydrogenase (ubiquinone) cytochrome b subunit
[Schizosaccharomyces japonicus yFS275]
gi|212003089|gb|EEB08749.1| succinate dehydrogenase (ubiquinone) cytochrome b subunit
[Schizosaccharomyces japonicus yFS275]
Length = 178
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 50/94 (53%), Gaps = 18/94 (19%)
Query: 26 RTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL--- 82
R I+I+P+ P + + +R+ RP SPHLTIY+ Q+T LS HR TGVAL
Sbjct: 33 RGISIQPM-----TPQENAEELAQQRVHRPNSPHLTIYQPQLTWYLSSAHRITGVALSGT 87
Query: 83 -----TAYALGLA-GVGLTTDI----NSVVPTYL 106
TAY L A G G +++ S VP +L
Sbjct: 88 LYLFSTAYLLAPAFGYGFDSNMIAHAVSQVPVWL 121
>gi|288957014|ref|YP_003447355.1| succinate dehydrogenase cytochrome b-556 subunit [Azospirillum
sp. B510]
gi|288909322|dbj|BAI70811.1| succinate dehydrogenase cytochrome b-556 subunit [Azospirillum
sp. B510]
Length = 142
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Query: 40 PSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
P E A+ N GRPLSPHL +YKL +T+V+SITHR TGV L
Sbjct: 7 PRTEDDAMANGS-GRPLSPHLQVYKLPLTAVMSITHRITGVGL 48
>gi|228008307|ref|NP_079597.2| succinate dehydrogenase cytochrome b560 subunit, mitochondrial
precursor [Mus musculus]
gi|21362402|sp|Q9CZB0.1|C560_MOUSE RecName: Full=Succinate dehydrogenase cytochrome b560 subunit,
mitochondrial; AltName: Full=Integral membrane protein
CII-3; AltName: Full=QPs-1; Short=QPs1; Flags:
Precursor
gi|12849813|dbj|BAB28491.1| unnamed protein product [Mus musculus]
gi|26328275|dbj|BAC27878.1| unnamed protein product [Mus musculus]
gi|74183258|dbj|BAE22557.1| unnamed protein product [Mus musculus]
Length = 169
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG---HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
AAP G +KE +N RPLSPHLTIYK + LS+ HRG+G+AL+
Sbjct: 27 AAPLGTTAKEEMERFWKKNTSSNRPLSPHLTIYKWSLPMALSVCHRGSGIALSG 80
>gi|12832459|dbj|BAB22116.1| unnamed protein product [Mus musculus]
Length = 169
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG---HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
AAP G +KE +N RPLSPHLTIYK + LS+ HRG+G+AL+
Sbjct: 27 AAPLGTTAKEEMERFWKKNTSSNRPLSPHLTIYKWSLPMALSVCHRGSGIALSG 80
>gi|148707186|gb|EDL39133.1| succinate dehydrogenase complex, subunit C, integral membrane
protein, isoform CRA_b [Mus musculus]
Length = 169
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG---HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
AAP G +KE +N RPLSPHLTIYK + LS+ HRG+G+AL+
Sbjct: 27 AAPLGTTAKEEMERFWKKNTSSNRPLSPHLTIYKWSLPMALSVCHRGSGIALSG 80
>gi|13543226|gb|AAH05779.1| Sdhc protein [Mus musculus]
Length = 169
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG---HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
AAP G +KE +N RPLSPHLTIYK + LS+ HRG+G+AL+
Sbjct: 27 AAPLGTTAKEEMERFWKKNTSSNRPLSPHLTIYKWSLPMALSVCHRGSGIALSG 80
>gi|157803312|ref|YP_001491861.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
canadensis str. McKiel]
gi|157784575|gb|ABV73076.1| Succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
canadensis str. McKiel]
Length = 124
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 31/42 (73%), Gaps = 3/42 (7%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+K + N+R P+SPHL+IYK+QI+S LSI HR TGVAL
Sbjct: 2 TKTKQEIYNKR---PISPHLSIYKMQISSTLSILHRITGVAL 40
>gi|426401221|ref|YP_007020193.1| Succinate dehydrogenase, cytochrome b556 subunit [Candidatus
Endolissoclinum patella L2]
gi|425857889|gb|AFX98925.1| Succinate dehydrogenase, cytochrome b556 subunit [Candidatus
Endolissoclinum patella L2]
Length = 127
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/31 (74%), Positives = 26/31 (83%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
RPLSPHL IYK Q+TSV+SI HR TG+AL A
Sbjct: 7 RPLSPHLQIYKPQLTSVMSICHRATGIALVA 37
>gi|417396477|gb|JAA45272.1| Putative succinate dehydrogenase cytochrome b560 subunit
mitochondrial [Desmodus rotundus]
Length = 169
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG-HAVRNERLG--RPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KE N+ LG RPLSPH+TIY+ + +SI HRGTG+AL+A
Sbjct: 27 AIPLGTAAKEEMERFWNKNLGSNRPLSPHITIYRWSLPMAMSICHRGTGIALSA 80
>gi|85544667|pdb|2FBW|C Chain C, Avian Respiratory Complex Ii With Carboxin Bound
gi|85544671|pdb|2FBW|P Chain P, Avian Respiratory Complex Ii With Carboxin Bound
gi|304445606|pdb|2WQY|C Chain C, Remodelling Of Carboxin Binding To The Q-Site Of Avian
Respiratory Complex Ii
gi|304445610|pdb|2WQY|P Chain P, Remodelling Of Carboxin Binding To The Q-Site Of Avian
Respiratory Complex Ii
Length = 141
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 28/36 (77%)
Query: 48 RNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
+N + RPLSPH++IYK + +SITHRGTGVAL+
Sbjct: 15 KNTKSSRPLSPHISIYKWSLPMAMSITHRGTGVALS 50
>gi|379022523|ref|YP_005299184.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
canadensis str. CA410]
gi|376323461|gb|AFB20702.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
canadensis str. CA410]
Length = 124
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 31/42 (73%), Gaps = 3/42 (7%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+K + N+R P+SPHL+IYK+QI+S LSI HR TGVAL
Sbjct: 2 TKTKQEIYNKR---PISPHLSIYKMQISSTLSILHRITGVAL 40
>gi|335775717|gb|AEH58665.1| mitochondrial succinate dehydrogenase cytochrome b560
subunit-like protein [Equus caballus]
Length = 150
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG-HAVRNERLG--RPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KE N+ +G RP+SPH+TIY + V+SI HRGTG+AL+A
Sbjct: 8 AVPLGTTAKEEMERFWNKNIGSNRPMSPHITIYSWSLPMVMSICHRGTGIALSA 61
>gi|325182722|emb|CCA17177.1| transmembrane protein putative [Albugo laibachii Nc14]
Length = 170
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 29 TIKPVAAPTGVPSKE-GHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
+++ +A T V S + ++ R RLGRP+SPH+ IY + IT+V SIT+R TGV L+
Sbjct: 17 SLRQLAMSTSVTSNQPSYSQRQARLGRPVSPHVQIYAMPITAVSSITNRVTGVGLS 72
>gi|110590576|pdb|2H88|C Chain C, Avian Mitochondrial Respiratory Complex Ii At 1.8
Angstrom Resolution
gi|110590580|pdb|2H88|P Chain P, Avian Mitochondrial Respiratory Complex Ii At 1.8
Angstrom Resolution
gi|110590584|pdb|2H89|C Chain C, Avian Respiratory Complex Ii With Malonate Bound
Length = 140
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 28/36 (77%)
Query: 48 RNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
+N + RPLSPH++IYK + +SITHRGTGVAL+
Sbjct: 15 KNTKSSRPLSPHISIYKWSLPMAMSITHRGTGVALS 50
>gi|254586589|ref|XP_002498862.1| ZYRO0G20350p [Zygosaccharomyces rouxii]
gi|238941756|emb|CAR29929.1| ZYRO0G20350p [Zygosaccharomyces rouxii]
Length = 178
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 40/80 (50%), Gaps = 14/80 (17%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL--------------TAYA 86
+E +R +R RP+SPHLTIY+ Q+T LS HR +GV L T +
Sbjct: 42 DEELQILRAQRKNRPISPHLTIYQPQMTWYLSSLHRVSGVMLGAAFYCLTIAFGVSTLFG 101
Query: 87 LGLAGVGLTTDINSVVPTYL 106
LGL LTT VPT+
Sbjct: 102 LGLNTENLTTWYKEKVPTWF 121
>gi|195389540|ref|XP_002053434.1| GJ23876 [Drosophila virilis]
gi|194151520|gb|EDW66954.1| GJ23876 [Drosophila virilis]
Length = 269
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Query: 49 NERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL--TAYALGLAGVGLTTDINSV 101
N++LGR +SPHL+IYK Q+TSV+SI R +G L + +GL G+ D+N++
Sbjct: 95 NKKLGRAMSPHLSIYKKQLTSVMSIFLRISGFILGIGIWTIGLTGLLCDIDVNAM 149
>gi|85544002|pdb|1YQ3|C Chain C, Avian Respiratory Complex Ii With Oxaloacetate And
Ubiquinone
gi|85544006|pdb|1YQ4|C Chain C, Avian Respiratory Complex Ii With 3-Nitropropionate And
Ubiquinone
Length = 141
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 28/36 (77%)
Query: 48 RNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
+N + RPLSPH++IYK + +SITHRGTGVAL+
Sbjct: 15 KNTKSSRPLSPHISIYKWSLPMAMSITHRGTGVALS 50
>gi|395535339|ref|XP_003769685.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial [Sarcophilus harrisii]
Length = 169
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG---HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KE +N RPLSPH+TIY + ++SITHRGTGVAL+A
Sbjct: 27 AIPLGTAAKEEMEHFWNKNINSNRPLSPHITIYSWSLPMMMSITHRGTGVALSA 80
>gi|149759773|ref|XP_001503815.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like isoform 1 [Equus caballus]
Length = 169
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG-HAVRNERLG--RPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KE N+ +G RP+SPH+TIY + V+SI HRGTG+AL+A
Sbjct: 27 AVPLGTTAKEEMERFWNKNIGSNRPMSPHITIYSWSLPMVMSICHRGTGIALSA 80
>gi|410986619|ref|XP_003999607.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial isoform 1 [Felis catus]
Length = 169
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG---HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KE +N L RPLSPH+TIY + +SI HRGTG+AL+A
Sbjct: 27 AVPLGTTAKEEMERFWNKNAGLNRPLSPHITIYSWSLPMAMSICHRGTGMALSA 80
>gi|11466547|ref|NP_044796.1| succinate:ubiquinone oxidoreductase subunit 3 (mitochondrion)
[Reclinomonas americana]
gi|1705531|sp|P80481.1|C560_RECAM RecName: Full=Succinate dehydrogenase cytochrome b560 subunit;
AltName: Full=Succinate dehydrogenase, subunit III
gi|2258377|gb|AAD11911.1| succinate:ubiquinone oxidoreductase subunit 3 (mitochondrion)
[Reclinomonas americana]
Length = 144
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%), Gaps = 2/39 (5%)
Query: 47 VRNERLGRPLSPHLTIYKLQITSVLSITHRGTG--VALT 83
+ N + RP+SPHLTIYKLQIT+ LSI HR TG +ALT
Sbjct: 14 IINMNINRPISPHLTIYKLQITNTLSIFHRITGGVLALT 52
>gi|363746951|ref|XP_003643864.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like [Gallus gallus]
Length = 138
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Query: 36 PTGVPSKEGHA---VRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
P +KE A +N + RPLSPH++IYK + +SITHRGTGVAL+
Sbjct: 29 PMATTAKEEMARFWEKNTKSSRPLSPHISIYKWSLPMAMSITHRGTGVALS 79
>gi|440893889|gb|ELR46505.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
[Bos grunniens mutus]
Length = 172
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG---HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KE +N L RPLSPH++IY + +SI HRGTG+AL+A
Sbjct: 30 AVPLGTTAKEEMERFWSKNTSLNRPLSPHISIYGWSLPMAMSICHRGTGIALSA 83
>gi|121712948|ref|XP_001274085.1| succinate dehydrogenase cytochrome b560 subunit [Aspergillus
clavatus NRRL 1]
gi|119402238|gb|EAW12659.1| succinate dehydrogenase cytochrome b560 subunit [Aspergillus
clavatus NRRL 1]
Length = 188
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 34/53 (64%)
Query: 31 KPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
K A T P+ E + +RL RP++PHL+IY+ QIT + S HR TGVAL+
Sbjct: 43 KRFAVTTTSPADESKILAQQRLNRPVAPHLSIYRPQITWIGSSLHRITGVALS 95
>gi|67459555|ref|YP_247179.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
felis URRWXCal2]
gi|75536045|sp|Q4UKC1.1|DHSC_RICFE RecName: Full=Succinate dehydrogenase cytochrome b556 subunit;
Short=Cytochrome b-556
gi|67005088|gb|AAY62014.1| Succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
felis URRWXCal2]
Length = 124
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 30/42 (71%), Gaps = 3/42 (7%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+K + N+R P SPHL+IYKLQI+S LSI HR TGVAL
Sbjct: 2 TKTKQEIYNKR---PTSPHLSIYKLQISSTLSILHRMTGVAL 40
>gi|119572986|gb|EAW52601.1| succinate dehydrogenase complex, subunit C, integral membrane
protein, 15kDa, isoform CRA_d [Homo sapiens]
Length = 150
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG-HAVRNERLG--RPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KE N+ +G RPLSPH+TIY + +SI HRGTG+AL+A
Sbjct: 8 AVPLGTTAKEEMERFWNKNIGSNRPLSPHITIYSWSLPMAMSICHRGTGIALSA 61
>gi|119572987|gb|EAW52602.1| succinate dehydrogenase complex, subunit C, integral membrane
protein, 15kDa, isoform CRA_e [Homo sapiens]
Length = 156
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG-HAVRNERLG--RPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KE N+ +G RPLSPH+TIY + +SI HRGTG+AL+A
Sbjct: 14 AVPLGTTAKEEMERFWNKNIGSNRPLSPHITIYSWSLPMAMSICHRGTGIALSA 67
>gi|281206854|gb|EFA81038.1| succinate dehydrogenase [Polysphondylium pallidum PN500]
Length = 205
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 31/43 (72%), Gaps = 8/43 (18%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGLTT 96
RP+SPHLTIYKL + ++LS+THR TG+AL GVGL T
Sbjct: 82 RPISPHLTIYKLPMPAILSVTHRATGIAL--------GVGLAT 116
>gi|296490234|tpg|DAA32347.1| TPA: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like isoform 1 [Bos taurus]
Length = 169
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG---HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KE +N L RPLSPH++IY + +SI HRGTG+AL+A
Sbjct: 27 AVPLGTTAKEEMERFWSKNTSLNRPLSPHISIYGWSLPMAMSICHRGTGIALSA 80
>gi|48146321|emb|CAG33383.1| SDHC [Homo sapiens]
Length = 169
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG-HAVRNERLG--RPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KE N+ +G RPLSPH+TIY + +SI HRGTG+AL+A
Sbjct: 27 AVPLGTTAKEEMERFWNKNIGSNRPLSPHITIYSWSLPMAMSICHRGTGIALSA 80
>gi|4506863|ref|NP_002992.1| succinate dehydrogenase cytochrome b560 subunit, mitochondrial
isoform 1 precursor [Homo sapiens]
gi|5915811|sp|Q99643.1|C560_HUMAN RecName: Full=Succinate dehydrogenase cytochrome b560 subunit,
mitochondrial; AltName: Full=Integral membrane protein
CII-3; AltName: Full=QPs-1; Short=QPs1; AltName:
Full=Succinate dehydrogenase complex subunit C;
AltName: Full=Succinate-ubiquinone oxidoreductase
cytochrome B large subunit; Short=CYBL; Flags:
Precursor
gi|1814226|gb|AAB41838.1| integral membrane protein CII-3 [Homo sapiens]
gi|3366669|gb|AAC27993.1| succinate dehydrogenase subunit C [Homo sapiens]
gi|3370989|dbj|BAA31998.1| cytochrome b large subunit of complex II [Homo sapiens]
gi|18088742|gb|AAH20808.1| Succinate dehydrogenase complex, subunit C, integral membrane
protein, 15kDa [Homo sapiens]
gi|21708000|gb|AAH33626.1| Succinate dehydrogenase complex, subunit C, integral membrane
protein, 15kDa [Homo sapiens]
gi|42542834|gb|AAH66329.1| Succinate dehydrogenase complex, subunit C, integral membrane
protein, 15kDa [Homo sapiens]
gi|119572985|gb|EAW52600.1| succinate dehydrogenase complex, subunit C, integral membrane
protein, 15kDa, isoform CRA_c [Homo sapiens]
Length = 169
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG-HAVRNERLG--RPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KE N+ +G RPLSPH+TIY + +SI HRGTG+AL+A
Sbjct: 27 AVPLGTTAKEEMERFWNKNIGSNRPLSPHITIYSWSLPMAMSICHRGTGIALSA 80
>gi|332219327|ref|XP_003258808.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial isoform 1 [Nomascus leucogenys]
Length = 169
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG-HAVRNERLG--RPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KE N+ +G RPLSPH+TIY + +SI HRGTG+AL+A
Sbjct: 27 AVPLGTTAKEEMERFWNKNIGSNRPLSPHITIYSWSLPMAMSICHRGTGIALSA 80
>gi|350540078|ref|NP_001233755.1| succinate dehydrogenase cytochrome b560 subunit, mitochondrial
[Cricetulus griseus]
gi|21362398|sp|P70097.1|C560_CRIGR RecName: Full=Succinate dehydrogenase cytochrome b560 subunit,
mitochondrial; AltName: Full=Integral membrane protein
CII-3; AltName: Full=QPs-1; Short=QPs1; Flags:
Precursor
gi|1518874|gb|AAB07265.1| integral membrane protein CII-3 [Cricetulus griseus]
Length = 169
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG---HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KE +N RP+SPHLTIY+ + V+SI HRGTGVAL+
Sbjct: 27 AVPLGTTAKEEMERFWNKNTSSKRPVSPHLTIYRWSLPMVMSICHRGTGVALSG 80
>gi|28461247|ref|NP_787008.1| succinate dehydrogenase cytochrome b560 subunit, mitochondrial
precursor [Bos taurus]
gi|1705529|sp|P35720.2|C560_BOVIN RecName: Full=Succinate dehydrogenase cytochrome b560 subunit,
mitochondrial; AltName: Full=Integral membrane protein
CII-3; AltName: Full=QPs-1; Short=QPs1; AltName:
Full=Succinate dehydrogenase complex subunit C; Flags:
Precursor
gi|786511|gb|AAB32390.1| succinate-ubiquinone oxidoreductase complex II membrane-intrinsic
subunit [Bos taurus]
gi|74267618|gb|AAI02063.1| Succinate dehydrogenase complex, subunit C, integral membrane
protein, 15kDa [Bos taurus]
gi|296489839|tpg|DAA31952.1| TPA: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial precursor [Bos taurus]
gi|1092498|prf||2024211A succinate ubiquinone oxidoreductase
Length = 169
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG---HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KE +N L RPLSPH++IY + +SI HRGTG+AL+A
Sbjct: 27 AVPLGTTAKEEMERFWSKNTTLNRPLSPHISIYGWSLPMAMSICHRGTGIALSA 80
>gi|2137070|pir||I48085 integral membrane protein CII-3 - Chinese hamster (fragment)
Length = 171
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG---HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KE +N RP+SPHLTIY+ + V+SI HRGTGVAL+
Sbjct: 31 AVPLGTTAKEEMERFWNKNTSSKRPVSPHLTIYRWSLPMVMSICHRGTGVALSG 84
>gi|121996856|ref|YP_001001643.1| succinate dehydrogenase, cytochrome b subunit [Halorhodospira
halophila SL1]
gi|121588261|gb|ABM60841.1| succinate dehydrogenase subunit C [Halorhodospira halophila SL1]
Length = 129
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 27/30 (90%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALT 83
RPLSPHLTIY+ Q+TS+LS+ HRGTGV +T
Sbjct: 6 RPLSPHLTIYRPQLTSLLSVLHRGTGVFVT 35
>gi|95769404|gb|ABF57433.1| succinate dehydrogenase complex, subunit C isoform 1 precursor
[Bos taurus]
Length = 168
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG---HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KE +N L RPLSPH++IY + +SI HRGTG+AL+A
Sbjct: 26 AVPLGTTAKEEMERFWSKNTTLNRPLSPHISIYGWSLPMAMSICHRGTGIALSA 79
>gi|22550363|ref|NP_689350.1| succinate:cytochrome c oxidoreductase subunit 3
[Chaetosphaeridium globosum]
gi|22417029|gb|AAM96628.1|AF494279_33 succinate:cytochrome c oxidoreductase subunit 3
[Chaetosphaeridium globosum]
Length = 129
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 28/40 (70%)
Query: 51 RLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLA 90
++ RPLSPHLT+YK Q+TS LSI HR +G L + L A
Sbjct: 2 KINRPLSPHLTVYKPQLTSTLSIFHRISGAFLAFFVLSFA 41
>gi|189209924|ref|XP_001941294.1| succinate dehydrogenase cytochrome b560 subunit [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187977387|gb|EDU44013.1| succinate dehydrogenase cytochrome b560 subunit [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 177
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 4 IFKLSTLCNPIASSHLRLLPHIRTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIY 63
IF+L A LR+ P R + + A S+ + +RL RP+SPHL IY
Sbjct: 6 IFQLG--LRRAAGPSLRVQPAGRVMQRRLAATGNTSQSESAQILAKQRLNRPVSPHLAIY 63
Query: 64 KLQITSVLSITHRGTGVALTA--YALGLA 90
+ QITS+ S +R TGV L+ Y G+A
Sbjct: 64 RPQITSIASAFNRITGVVLSGSLYLFGIA 92
>gi|315052622|ref|XP_003175685.1| succinate dehydrogenase cytochrome B subunit [Arthroderma gypseum
CBS 118893]
gi|311341000|gb|EFR00203.1| succinate dehydrogenase cytochrome B subunit [Arthroderma gypseum
CBS 118893]
Length = 192
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 15/81 (18%)
Query: 3 SIFKLSTLCNPIASSHLRLLPHIRTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTI 62
S + L T PI S H TI+P+ G + ++RL RP++PHL+I
Sbjct: 41 SFYALQTSTTPIPSKH----------TIQPMKKADGT-----QVLASQRLNRPIAPHLSI 85
Query: 63 YKLQITSVLSITHRGTGVALT 83
YK Q+TSV S R TG L+
Sbjct: 86 YKWQVTSVNSSLQRITGAVLS 106
>gi|114320488|ref|YP_742171.1| succinate dehydrogenase subunit C [Alkalilimnicola ehrlichii
MLHE-1]
gi|114226882|gb|ABI56681.1| succinate dehydrogenase subunit C [Alkalilimnicola ehrlichii
MLHE-1]
Length = 130
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/29 (75%), Positives = 25/29 (86%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL +YK Q+TSVLSI HRG+GV L
Sbjct: 6 RPLSPHLQVYKPQLTSVLSICHRGSGVVL 34
>gi|73535958|pdb|1ZOY|C Chain C, Crystal Structure Of Mitochondrial Respiratory Complex
Ii From Porcine Heart At 2.4 Angstroms
gi|73535962|pdb|1ZP0|C Chain C, Crystal Structure Of Mitochondrial Respiratory Complex
Ii Bound With 3-Nitropropionate And
2-Thenoyltrifluoroacetone
gi|322812260|pdb|3ABV|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With
N-Biphenyl-3-Yl-2-Trifluoromethyl-Benzamide
gi|322812268|pdb|3AE1|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With N-Phenyl-2-(Trifluoromethyl)-Benzamide
gi|322812272|pdb|3AE2|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With 2-Hydroxy-N-Phenyl-Benzamide
gi|322812276|pdb|3AE3|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With 2-Nitro-N-Phenyl-Benzamide
gi|322812280|pdb|3AE4|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With 2-Iodo-N-Methyl-Benzamide
gi|322812284|pdb|3AE5|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With
2-Methyl-N-(3-Isopropoxy-Phenyl)-Benzamide
gi|322812288|pdb|3AE6|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With N-(3-Isopropoxy-Phenyl)-Phthalamicacid
gi|322812292|pdb|3AE7|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With 2-Iodo-N-(3-Isopropoxy-Phenyl)-Benzamide
gi|322812296|pdb|3AE8|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With
N-(3-Isopropoxy-Phenyl)-2-Trifluoromethylbenzamide
gi|322812300|pdb|3AE9|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With
N-(3-Pentafluorophenyloxy-Phenyl)-2-Trifluoromethyl-
Benzamide
gi|322812304|pdb|3AEA|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With
N-(3-Dimethylaminomethyl-Phenyl)-2-Trifluoromethyl-
Benzamide
gi|322812308|pdb|3AEB|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With
N-(3-Phenoxy-Phenyl)-2-Trifluoromethyl-Benzamide
gi|322812312|pdb|3AEC|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With 2-Iodo-N-(1-Methylethyl)-Benzamid
gi|322812316|pdb|3AED|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With 2-Iodo-N-Phenyl-Benzamide
gi|322812320|pdb|3AEE|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With Atpenin A5
gi|322812324|pdb|3AEF|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii With An Empty Quinone-Binding Pocket
gi|322812328|pdb|3AEG|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex
Ii Bound With N-Biphenyl-3-Yl-2-Iodo-Benzamide
gi|345531794|pdb|3SFD|C Chain C, Crystal Structure Of Porcine Mitochondrial Respiratory
Complex Ii Bound With Oxaloacetate And
Pentachlorophenol
gi|345531798|pdb|3SFE|C Chain C, Crystal Structure Of Porcine Mitochondrial Respiratory
Complex Ii Bound With Oxaloacetate And Thiabendazole
Length = 140
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Query: 42 KEGHAVRNERLG--RPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
+E N+ LG RPLSPH+TIY+ + +SI HRGTG+AL+A
Sbjct: 7 EEMERFWNKNLGSNRPLSPHITIYRWSLPMAMSICHRGTGIALSA 51
>gi|195452048|ref|XP_002073190.1| GK13994 [Drosophila willistoni]
gi|194169275|gb|EDW84176.1| GK13994 [Drosophila willistoni]
Length = 230
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 6/60 (10%)
Query: 39 VPSKEGHAV----RNERLGRPLSPHLTIYKLQITSVLSITHRGTG--VALTAYALGLAGV 92
VP+ G AV RN LGR LSP L+IYK ++TSV+SI+ R TG +AL +A+G+ G
Sbjct: 11 VPAVYGSAVNYFERNINLGRHLSPCLSIYKRELTSVMSISLRMTGFFLALCVWAVGILGF 70
>gi|374293177|ref|YP_005040212.1| Succinate dehydrogenase, cytochrome b subunit [Azospirillum
lipoferum 4B]
gi|357425116|emb|CBS87999.1| Succinate dehydrogenase, cytochrome b subunit [Azospirillum
lipoferum 4B]
Length = 129
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 26/30 (86%)
Query: 53 GRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
GRPLSPHL +YKL +T+V+SITHR TGV L
Sbjct: 6 GRPLSPHLQVYKLPLTAVMSITHRITGVGL 35
>gi|348561878|ref|XP_003466738.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like [Cavia porcellus]
Length = 169
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG---HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KE +N RP+SPH TIY+ + V+SI HRGTGVAL+
Sbjct: 27 AVPLGTTAKEEMERFWNKNTSSNRPVSPHFTIYRWSLPMVMSICHRGTGVALSG 80
>gi|299470359|emb|CBN78408.1| SDH3, succinate dehydrogenase subunit 3 [Ectocarpus siliculosus]
Length = 176
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 33/54 (61%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGL 94
KE + R R GRP+SPH+TIY ++ SI +R TGVAL A G++G L
Sbjct: 48 EKESYTARQARTGRPVSPHVTIYDFPPAALSSIANRVTGVALVAGLYGISGATL 101
>gi|119572984|gb|EAW52599.1| succinate dehydrogenase complex, subunit C, integral membrane
protein, 15kDa, isoform CRA_b [Homo sapiens]
Length = 189
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG-HAVRNERLG--RPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KE N+ +G RPLSPH+TIY + +SI HRGTG+AL+A
Sbjct: 47 AVPLGTTAKEEMERFWNKNIGSNRPLSPHITIYSWSLPMAMSICHRGTGIALSA 100
>gi|397481268|ref|XP_003811870.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial [Pan paniscus]
Length = 200
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG-HAVRNERLG--RPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KE N+ +G RPLSPH+TIY + +SI HRGTG+AL+A
Sbjct: 58 AVPLGTTAKEEMERFWNKNIGSNRPLSPHITIYSWSLPMAMSICHRGTGIALSA 111
>gi|78711820|ref|NP_001030588.1| succinate dehydrogenase cytochrome b560 subunit, mitochondrial
isoform 2 precursor [Homo sapiens]
gi|114560907|ref|XP_001174000.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial isoform 3 [Pan troglodytes]
gi|78096641|dbj|BAE46979.1| succinate dehydrogenase complex, subunit C delta5 alternative
splicing variant [Homo sapiens]
gi|194376880|dbj|BAG57586.1| unnamed protein product [Homo sapiens]
Length = 150
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG-HAVRNERLG--RPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KE N+ +G RPLSPH+TIY + +SI HRGTG+AL+A
Sbjct: 27 AVPLGTTAKEEMERFWNKNIGSNRPLSPHITIYSWSLPMAMSICHRGTGIALSA 80
>gi|398393984|ref|XP_003850451.1| succinate dehydrogenase cytochrome B subunit [Zymoseptoria tritici
IPO323]
gi|339470329|gb|EGP85427.1| succinate dehydrogenase cytochrome B subunit [Zymoseptoria tritici
IPO323]
gi|347803248|gb|AEP22593.1| mitochondrial succinate dehydrogenase subunit C [Zymoseptoria
tritici]
gi|347803250|gb|AEP22594.1| mitochondrial succinate dehydrogenase subunit C [Zymoseptoria
tritici]
gi|347803252|gb|AEP22595.1| mitochondrial succinate dehydrogenase subunit C [Zymoseptoria
tritici]
Length = 187
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 35/60 (58%), Gaps = 8/60 (13%)
Query: 37 TGVPSKEGHAVRNE-----RLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA--YALGL 89
T E HA RNE RL RP++PHL IYK QIT LS +R TGVA + YA GL
Sbjct: 44 TAAAVSESHA-RNEILAKQRLNRPVAPHLAIYKPQITWYLSALNRVTGVAASGAFYAFGL 102
>gi|163796399|ref|ZP_02190359.1| succinate dehydrogenase, cytochrome b subunit [alpha
proteobacterium BAL199]
gi|159178249|gb|EDP62793.1| succinate dehydrogenase, cytochrome b subunit [alpha
proteobacterium BAL199]
Length = 128
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/27 (81%), Positives = 24/27 (88%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGV 80
RPLSPHL IYK Q+TSVLSI+HR TGV
Sbjct: 6 RPLSPHLQIYKPQLTSVLSISHRATGV 32
>gi|383502160|ref|YP_005415519.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
australis str. Cutlack]
gi|378933171|gb|AFC71676.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
australis str. Cutlack]
Length = 124
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 30/42 (71%), Gaps = 3/42 (7%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+K + N+R P+SPHLTIYK QI+S LSI HR TGVAL
Sbjct: 2 TKTKQEIYNKR---PISPHLTIYKPQISSTLSILHRMTGVAL 40
>gi|53850596|ref|NP_001005534.1| succinate dehydrogenase complex, subunit C [Rattus norvegicus]
gi|51980592|gb|AAH82027.1| Succinate dehydrogenase complex, subunit C, integral membrane
protein [Rattus norvegicus]
gi|149040638|gb|EDL94595.1| succinate dehydrogenase complex, subunit C, integral membrane
protein, isoform CRA_b [Rattus norvegicus]
Length = 169
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Query: 34 AAPTGVPSKEGHAV---RNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
AAP G +KE A +N RP+SPHLTIY+ + +S+ HRG+G+A++
Sbjct: 27 AAPLGTTAKEEMARFWNKNTSSNRPVSPHLTIYRWSLPMAMSVCHRGSGIAMS 79
>gi|347803258|gb|AEP22598.1| mitochondrial succinate dehydrogenase subunit C [Zymoseptoria
tritici]
Length = 187
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 35/60 (58%), Gaps = 8/60 (13%)
Query: 37 TGVPSKEGHAVRNE-----RLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA--YALGL 89
T E HA RNE RL RP++PHL IYK QIT LS +R TGVA + YA GL
Sbjct: 44 TAAAVSESHA-RNEILAKQRLNRPVAPHLAIYKPQITWYLSALNRVTGVAASGAFYAFGL 102
>gi|149040640|gb|EDL94597.1| succinate dehydrogenase complex, subunit C, integral membrane
protein, isoform CRA_d [Rattus norvegicus]
Length = 140
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEGHAV---RNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
AAP G +KE A +N RP+SPHLTIY+ + +S+ HRG+G+A++
Sbjct: 27 AAPLGTTAKEEMARFWNKNTSSNRPVSPHLTIYRWSLPMAMSVCHRGSGIAMSG 80
>gi|294085393|ref|YP_003552153.1| succinate dehydrogenase subunit C [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292664968|gb|ADE40069.1| succinate dehydrogenase subunit C [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 123
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/29 (79%), Positives = 24/29 (82%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYK Q+TSVLSI HR TGV L
Sbjct: 5 RPLSPHLQIYKPQMTSVLSICHRATGVVL 33
>gi|255713256|ref|XP_002552910.1| KLTH0D04312p [Lachancea thermotolerans]
gi|238934290|emb|CAR22472.1| KLTH0D04312p [Lachancea thermotolerans CBS 6340]
Length = 168
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 25 IRTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL-- 82
+RT + + +A P+++ + +R RP+SPHLTIY+ Q+T LS HR +GV L
Sbjct: 16 LRTASRRMIATAKTSPARQQEILIAQRKNRPVSPHLTIYQPQLTWYLSSLHRVSGVILAF 75
Query: 83 ----TAYALG---LAGVGLTTD 97
T A G L G+GLT++
Sbjct: 76 GFFATTIAFGTSALLGLGLTSN 97
>gi|297493990|gb|ADI40717.1| succinate dehydrogenase complex subunit C [Miniopterus
schreibersii]
Length = 139
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG-HAVRNERLG--RPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KE N+ G RPLSPH+TIY + +SI HRGTGVAL+A
Sbjct: 11 AVPLGTTAKEEMERFWNKNTGSNRPLSPHITIYSWSLPMAMSICHRGTGVALSA 64
>gi|449542400|gb|EMD33379.1| hypothetical protein CERSUDRAFT_160305 [Ceriporiopsis
subvermispora B]
Length = 177
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 40 PSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLA 90
PS E + ++RL RP SPH TIY+ Q+T + SI +R TGV L+ G A
Sbjct: 44 PSAEQQILNSQRLKRPSSPHFTIYQPQLTWIGSIANRVTGVGLSVLLYGYA 94
>gi|385302689|gb|EIF46809.1| ymr118c-like protein [Dekkera bruxellensis AWRI1499]
Length = 143
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 34/52 (65%), Gaps = 3/52 (5%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGV 92
S+E + +R RPLSPHL+IY+ Q+T+V+S HR +GV L A G GV
Sbjct: 61 SQEEEILVAQRKNRPLSPHLSIYQKQLTNVMSALHRLSGVXLAA---GFYGV 109
>gi|325093799|gb|EGC47109.1| succinate dehydrogenase cytochrome b560 subunit [Ajellomyces
capsulatus H88]
Length = 187
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 29/35 (82%)
Query: 49 NERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
+RL RP+SPHL+IY+ QIT +LS T+R TGVAL+
Sbjct: 60 QQRLNRPVSPHLSIYQPQITWILSSTNRITGVALS 94
>gi|164663263|ref|XP_001732753.1| hypothetical protein MGL_0528 [Malassezia globosa CBS 7966]
gi|159106656|gb|EDP45539.1| hypothetical protein MGL_0528 [Malassezia globosa CBS 7966]
Length = 193
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 9/77 (11%)
Query: 16 SSHLRLLPHIRTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITH 75
SS + LP + + P+ + K + RNER P+SPHL+IY+ Q+T V SI H
Sbjct: 34 SSKAQALPWAKKAPVVPMTEEQDL--KRLNTQRNER---PISPHLSIYQPQLTWVSSILH 88
Query: 76 RGTGV----ALTAYALG 88
R TG AL AYA+G
Sbjct: 89 RATGTGMSWALYAYAIG 105
>gi|403294094|ref|XP_003938039.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial isoform 1 [Saimiri boliviensis
boliviensis]
Length = 169
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG-HAVRNERLG--RPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KE N+ G RPLSPH+TIY + +SI HRGTG+AL+A
Sbjct: 27 AVPLGTTAKEEMERFWNKNTGSNRPLSPHITIYSWSLPMAMSICHRGTGIALSA 80
>gi|328909491|gb|AEB61413.1| succinate dehydrogenase cytochrome b560 subunit
mitochondrial-like protein, partial [Equus caballus]
Length = 136
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Query: 42 KEGHAVRNERLG--RPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
+E N+ +G RP+SPH+TIY + V+SI HRGTG+AL+A
Sbjct: 3 EEMERFWNKNIGSNRPMSPHITIYSWSLPMVMSICHRGTGIALSA 47
>gi|225557168|gb|EEH05455.1| succinate dehydrogenase cytochrome b560 subunit [Ajellomyces
capsulatus G186AR]
Length = 187
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 29/35 (82%)
Query: 49 NERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
+RL RP+SPHL+IY+ QIT +LS T+R TGVAL+
Sbjct: 60 QQRLNRPVSPHLSIYQPQITWILSSTNRITGVALS 94
>gi|240277715|gb|EER41223.1| succinate dehydrogenase cytochrome b560 subunit [Ajellomyces
capsulatus H143]
Length = 187
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 29/35 (82%)
Query: 49 NERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
+RL RP+SPHL+IY+ QIT +LS T+R TGVAL+
Sbjct: 60 QQRLNRPVSPHLSIYQPQITWILSSTNRITGVALS 94
>gi|390476939|ref|XP_003735211.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like [Callithrix jacchus]
Length = 169
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG-HAVRNERLG--RPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KE N+ G RPLSPH+TIY + +SI HRGTG+AL+A
Sbjct: 27 AVPLGTTAKEEMERFWNKNTGSNRPLSPHITIYSWSLPMAMSICHRGTGIALSA 80
>gi|157825304|ref|YP_001493024.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
akari str. Hartford]
gi|157799262|gb|ABV74516.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
akari str. Hartford]
Length = 124
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 30/42 (71%), Gaps = 3/42 (7%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+K + N+R P+SPHLTIYK QI+S LSI HR TGVAL
Sbjct: 2 TKTKQEIYNKR---PISPHLTIYKPQISSTLSILHRITGVAL 40
>gi|347803254|gb|AEP22596.1| mitochondrial succinate dehydrogenase subunit C [Zymoseptoria
tritici]
Length = 187
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 34 AAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA--YALGL 89
AA P + +RL RP++PHL IYK QIT LS +R TGVA + YA GL
Sbjct: 45 AAAVSEPHARNEILAKQRLNRPVAPHLAIYKPQITWYLSALNRVTGVAASGAFYAFGL 102
>gi|402820251|ref|ZP_10869818.1| hypothetical protein IMCC14465_10520 [alpha proteobacterium
IMCC14465]
gi|402510994|gb|EJW21256.1| hypothetical protein IMCC14465_10520 [alpha proteobacterium
IMCC14465]
Length = 149
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 27/40 (67%)
Query: 45 HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
H R++ RPLSPH+ IY+ +T LSI HR TGVAL A
Sbjct: 15 HVSRHDASKRPLSPHIQIYRWTLTMFLSILHRATGVALYA 54
>gi|397611682|gb|EJK61431.1| hypothetical protein THAOC_18084 [Thalassiosira oceanica]
Length = 219
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 34/53 (64%)
Query: 42 KEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGL 94
KE ++ R GRP+SPH+TIY + ++ SIT+R TGV L+ A GL V L
Sbjct: 88 KENYSARMAATGRPISPHVTIYSFPVGALSSITNRVTGVMLSFGAAGLGAVEL 140
>gi|403412680|emb|CCL99380.1| predicted protein [Fibroporia radiculosa]
Length = 177
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 23 PHIRTITIKPVAAPTGVPSKEGHAVRN-ERLGRPLSPHLTIYKLQITSVLSITHRGTGVA 81
P +R++ K +P + N +RL RP SPH TIY+ Q+T + SI +R TG A
Sbjct: 26 PALRSLVAKRTIQTQSLPPSSSQEILNAQRLKRPSSPHFTIYQFQLTWLGSIANRMTGAA 85
Query: 82 LTAYALGLA 90
L+ G A
Sbjct: 86 LSVLLYGYA 94
>gi|344286634|ref|XP_003415062.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like [Loxodonta africana]
Length = 265
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEGHAV---RNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KE +N RP+SPH+TIY + V+SI HRGTG+AL+A
Sbjct: 123 AVPLGTTAKEEMEQFWNKNTSSNRPVSPHITIYSWPLPMVMSICHRGTGIALSA 176
>gi|330929855|ref|XP_003302800.1| hypothetical protein PTT_14754 [Pyrenophora teres f. teres 0-1]
gi|311321608|gb|EFQ89104.1| hypothetical protein PTT_14754 [Pyrenophora teres f. teres 0-1]
Length = 177
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 2 NSIFKLSTLCNPIASSHLRLLPHIRTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLT 61
IF+L +A+ LR+ P R + + A S+ + +RL RP+SPHL
Sbjct: 4 QRIFQLG--LRRVAAPSLRVQPAGRLMQRRLAATGNASQSEAAQILAKQRLNRPVSPHLA 61
Query: 62 IYKLQITSVLSITHRGTGVALTA--YALGLA 90
IY+ QIT + S +R TG+ L+ Y G+A
Sbjct: 62 IYRPQITWLASSLNRITGIVLSGSLYLFGIA 92
>gi|403294100|ref|XP_003938042.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial isoform 4 [Saimiri boliviensis
boliviensis]
Length = 150
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG-HAVRNERLG--RPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KE N+ G RPLSPH+TIY + +SI HRGTG+AL+A
Sbjct: 27 AVPLGTTAKEEMERFWNKNTGSNRPLSPHITIYSWSLPMAMSICHRGTGIALSA 80
>gi|384941920|gb|AFI34565.1| succinate dehydrogenase cytochrome b560 subunit, mitochondrial
isoform 1 precursor [Macaca mulatta]
Length = 169
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG---HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KE +N RPLSPH+TIY + +SI HRGTG+AL+A
Sbjct: 27 AVPLGTTAKEEMERFWNKNISSNRPLSPHITIYSWSLPMAMSICHRGTGIALSA 80
>gi|312071011|ref|XP_003138411.1| hypothetical protein LOAG_02826 [Loa loa]
gi|307766426|gb|EFO25660.1| hypothetical protein LOAG_02826 [Loa loa]
Length = 187
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 37 TGVPSKEG---HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVG 93
T P +E + +R L RP+SPHLT+YK Q+T ++S HR TG A+ A AL + GVG
Sbjct: 33 TKTPIQEWGWDYLMRQRALKRPISPHLTVYKPQVTWMVSGFHRVTGCAM-AGALLIGGVG 91
Query: 94 L 94
Sbjct: 92 F 92
>gi|344252465|gb|EGW08569.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
[Cricetulus griseus]
Length = 132
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 27/37 (72%)
Query: 48 RNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
+N RP+SPHLTIY+ + V+SI HRGTGVAL+
Sbjct: 7 KNTSSKRPVSPHLTIYRWSLPMVMSICHRGTGVALSG 43
>gi|326404267|ref|YP_004284349.1| succinate dehydrogenase cytochrome b subunit [Acidiphilium
multivorum AIU301]
gi|325051129|dbj|BAJ81467.1| succinate dehydrogenase cytochrome b subunit [Acidiphilium
multivorum AIU301]
Length = 147
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/31 (74%), Positives = 26/31 (83%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
RPLSPHL +Y+ QITS LSI HR TGVAL+A
Sbjct: 25 RPLSPHLQVYRPQITSTLSILHRITGVALSA 55
>gi|296818369|ref|XP_002849521.1| succinate dehydrogenase cytochrome b560 subunit [Arthroderma otae
CBS 113480]
gi|238839974|gb|EEQ29636.1| succinate dehydrogenase cytochrome b560 subunit [Arthroderma otae
CBS 113480]
Length = 197
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 35/57 (61%), Gaps = 9/57 (15%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA--YALGLA-------GVGLTTD 97
+RL RPLSPHL IYK Q+TSV S R TGV L+ Y G++ G GL+++
Sbjct: 70 QRLKRPLSPHLAIYKWQVTSVNSSLQRITGVVLSGGLYLFGISYLASSYFGWGLSSE 126
>gi|338983233|ref|ZP_08632450.1| Succinate dehydrogenase, cytochrome b subunit [Acidiphilium sp.
PM]
gi|338207830|gb|EGO95750.1| Succinate dehydrogenase, cytochrome b subunit [Acidiphilium sp.
PM]
Length = 146
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/31 (74%), Positives = 26/31 (83%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
RPLSPHL +Y+ QITS LSI HR TGVAL+A
Sbjct: 24 RPLSPHLQVYRPQITSTLSILHRITGVALSA 54
>gi|148260873|ref|YP_001235000.1| succinate dehydrogenase, cytochrome b subunit [Acidiphilium
cryptum JF-5]
gi|146402554|gb|ABQ31081.1| succinate dehydrogenase subunit C [Acidiphilium cryptum JF-5]
Length = 143
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/31 (74%), Positives = 26/31 (83%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
RPLSPHL +Y+ QITS LSI HR TGVAL+A
Sbjct: 21 RPLSPHLQVYRPQITSTLSILHRITGVALSA 51
>gi|894229|gb|AAB33776.1| succinate-ubiquinone reductase QPs1 subunit [cattle, heart,
Peptide Mitochondrial, 140 aa]
Length = 140
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%)
Query: 37 TGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
T E +N L RPLSPH++IY + +SI HRGTG+AL+A
Sbjct: 4 TAKEEMERFWSKNTTLNRPLSPHISIYGWSLPMAMSICHRGTGIALSA 51
>gi|355757254|gb|EHH60779.1| hypothetical protein EGM_18638 [Macaca fascicularis]
Length = 169
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG---HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KE +N RP+SPH+TIY + +SI HRGTG+ALTA
Sbjct: 27 AVPLGTTAKEEMERFWNKNISSNRPVSPHITIYSWSLPMAMSICHRGTGIALTA 80
>gi|162939|gb|AAA21608.1| cytochrome b-560 [Bos taurus]
Length = 132
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 48 RNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
+N L RPLSPH++IY + +SI HRGTG+AL+A
Sbjct: 7 KNTTLNRPLSPHISIYGWSLPMAMSICHRGTGIALSA 43
>gi|397615314|gb|EJK63353.1| hypothetical protein THAOC_15989, partial [Thalassiosira oceanica]
Length = 133
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 34/53 (64%)
Query: 42 KEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGL 94
KE ++ R GRP+SPH+TIY + ++ SIT+R TGV L+ A GL V L
Sbjct: 61 KENYSARMAATGRPVSPHVTIYSFPVGALSSITNRVTGVMLSFGAAGLGAVEL 113
>gi|381151930|ref|ZP_09863799.1| succinate dehydrogenase, cytochrome b556 subunit
[Methylomicrobium album BG8]
gi|380883902|gb|EIC29779.1| succinate dehydrogenase, cytochrome b556 subunit
[Methylomicrobium album BG8]
Length = 130
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 27/31 (87%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
RPLSPHL +Y+L +T+VLSITHR TGV L+A
Sbjct: 7 RPLSPHLQVYRLPLTAVLSITHRITGVLLSA 37
>gi|426217009|ref|XP_004002746.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial isoform 1 [Ovis aries]
Length = 169
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG---HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KE +N RPLSPH++IY + +SI HRGTG+AL+A
Sbjct: 27 AVPLGTTAKEEMERFWKKNTSSNRPLSPHISIYSWSLPMAMSICHRGTGIALSA 80
>gi|148707185|gb|EDL39132.1| succinate dehydrogenase complex, subunit C, integral membrane
protein, isoform CRA_a [Mus musculus]
Length = 150
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%)
Query: 37 TGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
T E +N RPLSPHLTIYK + LS+ HRG+G+AL+
Sbjct: 14 TAKEEMERFWKKNTSSNRPLSPHLTIYKWSLPMALSVCHRGSGIALSG 61
>gi|239947122|ref|ZP_04698875.1| succinate dehydrogenase, cytochrome b556 subunit [Rickettsia
endosymbiont of Ixodes scapularis]
gi|239921398|gb|EER21422.1| succinate dehydrogenase, cytochrome b556 subunit [Rickettsia
endosymbiont of Ixodes scapularis]
Length = 124
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+K + N+R P SPHLTIYK QI+S LSI HR TGVAL
Sbjct: 2 TKTKQEIYNKR---PTSPHLTIYKPQISSTLSILHRMTGVAL 40
>gi|66820248|ref|XP_643757.1| succinate dehydrogenase [Dictyostelium discoideum AX4]
gi|74843770|sp|Q8T2T5.1|C560_DICDI RecName: Full=Succinate dehydrogenase cytochrome b560 subunit,
mitochondrial; Flags: Precursor
gi|60471884|gb|EAL69838.1| succinate dehydrogenase [Dictyostelium discoideum AX4]
Length = 192
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 28/41 (68%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGL 94
+P SPHLTIYK + +V+SI HR TG+ L GLAGV L
Sbjct: 71 QPTSPHLTIYKFPLPAVMSIMHRATGICLALGITGLAGVTL 111
>gi|91205983|ref|YP_538338.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
bellii RML369-C]
gi|157826653|ref|YP_001495717.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
bellii OSU 85-389]
gi|122425294|sp|Q1RHB5.1|DHSC_RICBR RecName: Full=Succinate dehydrogenase cytochrome b556 subunit;
Short=Cytochrome b-556
gi|91069527|gb|ABE05249.1| Succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
bellii RML369-C]
gi|157801957|gb|ABV78680.1| Succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
bellii OSU 85-389]
Length = 125
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+K + N+R P SPHLTIYK QI+S LSI HR TGVAL
Sbjct: 2 TKTKQEIYNKR---PTSPHLTIYKPQISSTLSILHRMTGVAL 40
>gi|150406491|ref|YP_001315099.1| succinate:cytochrome c oxidoreductase subunit 3 [Chlorokybus
atmophyticus]
gi|126507728|gb|ABO15125.1| succinate:cytochrome c oxidoreductase subunit 3 [Chlorokybus
atmophyticus]
Length = 133
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 33/51 (64%), Gaps = 6/51 (11%)
Query: 52 LGRPLSPHLTIYKLQITSVLSITHRGTG------VALTAYALGLAGVGLTT 96
L RPLSPHLTIYK Q+TS+LSI HR TG V LT + L + LT+
Sbjct: 5 LHRPLSPHLTIYKPQLTSMLSIFHRITGAFMATSVLLTIFLLKICNFHLTS 55
>gi|119186307|ref|XP_001243760.1| hypothetical protein CIMG_03201 [Coccidioides immitis RS]
Length = 205
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA--YALGLAGV 92
+RL RP+SPHL+IYK QITSV+S R TG+ L+ Y G A V
Sbjct: 78 QRLNRPVSPHLSIYKFQITSVVSSLERLTGMMLSGGLYLFGTAYV 122
>gi|392870471|gb|EAS32277.2| succinate dehydrogenase, cytochrome b556 subunit [Coccidioides
immitis RS]
Length = 185
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA--YALGLAGV 92
+RL RP+SPHL+IYK QITSV+S R TG+ L+ Y G A V
Sbjct: 58 QRLNRPVSPHLSIYKFQITSVVSSLERLTGMMLSGGLYLFGTAYV 102
>gi|320038993|gb|EFW20928.1| succinate dehydrogenase cytochrome b560 subunit [Coccidioides
posadasii str. Silveira]
Length = 193
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA--YALGLAGV 92
+RL RP+SPHL+IYK QITSV+S R TG+ L+ Y G A V
Sbjct: 66 QRLNRPVSPHLSIYKFQITSVVSSLERLTGMMLSGGLYLFGTAYV 110
>gi|126134539|ref|XP_001383794.1| succinate dehydrogenase [Scheffersomyces stipitis CBS 6054]
gi|126095943|gb|ABN65765.1| succinate dehydrogenase [Scheffersomyces stipitis CBS 6054]
Length = 160
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 26 RTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA- 84
R + + V+ +E + +R RP+SPHLTIY+ Q+T VLS HR TGVA+
Sbjct: 10 RVLLARSVSTVKASHDQENEILIAQRKNRPVSPHLTIYQPQLTMVLSSFHRITGVAMAGA 69
Query: 85 -YAL 87
YAL
Sbjct: 70 FYAL 73
>gi|389879130|ref|YP_006372695.1| succinate dehydrogenase cytochrome b-556 subunit [Tistrella
mobilis KA081020-065]
gi|388529914|gb|AFK55111.1| succinate dehydrogenase cytochrome b-556 subunit [Tistrella
mobilis KA081020-065]
Length = 128
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 30/37 (81%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLA 90
RPLSPHL +Y+L +T+++SI+HR TGVAL+ L LA
Sbjct: 7 RPLSPHLQVYRLPLTALMSISHRATGVALSVGTLLLA 43
>gi|383481108|ref|YP_005390023.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
rhipicephali str. 3-7-female6-CWPP]
gi|378933447|gb|AFC71950.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
rhipicephali str. 3-7-female6-CWPP]
Length = 124
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+K + N+R P SPHLTIYK QI+S LSI HR TGVAL
Sbjct: 2 TKTKQEIYNKR---PTSPHLTIYKPQISSTLSILHRMTGVAL 40
>gi|383312136|ref|YP_005364937.1| succinate dehydrogenase cytochrome b-556 subunit [Candidatus
Rickettsia amblyommii str. GAT-30V]
gi|378930796|gb|AFC69305.1| succinate dehydrogenase cytochrome b-556 subunit [Candidatus
Rickettsia amblyommii str. GAT-30V]
Length = 124
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+K + N+R P SPHLTIYK QI+S LSI HR TGVAL
Sbjct: 2 TKTKQEIYNKR---PTSPHLTIYKPQISSTLSILHRMTGVAL 40
>gi|347803256|gb|AEP22597.1| mitochondrial succinate dehydrogenase subunit C [Zymoseptoria
tritici]
Length = 187
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 37 TGVPSKEGHA----VRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA--YALGL 89
T E HA + +RL RP++PHL IYK QIT LS +R TGVA + YA GL
Sbjct: 44 TAAAVSESHAGNEILAKQRLNRPVAPHLAIYKPQITWYLSALNRVTGVAASGAFYAFGL 102
>gi|294624875|ref|ZP_06703532.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 11122]
gi|294665038|ref|ZP_06730345.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 10535]
gi|292600834|gb|EFF44914.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 11122]
gi|292605195|gb|EFF48539.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 10535]
Length = 131
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 29/42 (69%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGLT 95
RPLSPHL +Y+ QI V SI +R TG+ L+ ALG+A LT
Sbjct: 6 RPLSPHLQVYRWQIQMVTSILNRATGIVLSVGALGIAAALLT 47
>gi|346725078|ref|YP_004851747.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
axonopodis pv. citrumelo F1]
gi|346649825|gb|AEO42449.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
axonopodis pv. citrumelo F1]
Length = 131
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 29/42 (69%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGLT 95
RPLSPHL +Y+ QI V SI +R TG+ L+ ALG+A LT
Sbjct: 6 RPLSPHLQVYRWQIQMVTSILNRATGIVLSVGALGIAAALLT 47
>gi|379713240|ref|YP_005301578.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
massiliae str. AZT80]
gi|376333886|gb|AFB31118.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
massiliae str. AZT80]
Length = 124
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+K + N+R P SPHLTIYK QI+S LSI HR TGVAL
Sbjct: 2 TKTKQEIYNKR---PTSPHLTIYKPQISSTLSILHRMTGVAL 40
>gi|157964193|ref|YP_001499017.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
massiliae MTU5]
gi|157843969|gb|ABV84470.1| Succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
massiliae MTU5]
Length = 124
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+K + N+R P SPHLTIYK QI+S LSI HR TGVAL
Sbjct: 2 TKTKQEIYNKR---PTSPHLTIYKPQISSTLSILHRMTGVAL 40
>gi|389749576|gb|EIM90747.1| succinate dehydrogenase cytochrome b560 subunit [Stereum hirsutum
FP-91666 SS1]
Length = 175
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 29 TIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALG 88
TIK + P PS + +RL RP SPH TIY+ Q+T + SI +R TG AL+ G
Sbjct: 34 TIKTQSLP---PSASEEILNTQRLNRPSSPHFTIYQPQLTWIGSIFNRATGAALSVLLYG 90
Query: 89 LA 90
+
Sbjct: 91 FS 92
>gi|325928377|ref|ZP_08189572.1| succinate dehydrogenase subunit C [Xanthomonas perforans 91-118]
gi|325541253|gb|EGD12800.1| succinate dehydrogenase subunit C [Xanthomonas perforans 91-118]
Length = 131
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 29/42 (69%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGLT 95
RPLSPHL +Y+ QI V SI +R TG+ L+ ALG+A LT
Sbjct: 6 RPLSPHLQVYRWQIQMVTSILNRATGIVLSVGALGIAAALLT 47
>gi|75676982|ref|YP_319403.1| succinate dehydrogenase, cytochrome b subunit [Nitrobacter
winogradskyi Nb-255]
gi|74421852|gb|ABA06051.1| succinate dehydrogenase subunit C [Nitrobacter winogradskyi
Nb-255]
Length = 141
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 26/38 (68%)
Query: 45 HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
A+ R+ RPLSPHL IY+ +T LSI HR TGVAL
Sbjct: 6 EAMMTVRIERPLSPHLQIYRWTLTMTLSIVHRATGVAL 43
>gi|383482976|ref|YP_005391890.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
montanensis str. OSU 85-930]
gi|378935330|gb|AFC73831.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
montanensis str. OSU 85-930]
Length = 124
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+K + N+R P SPHLTIYK QI+S LSI HR TGVAL
Sbjct: 2 TKTKQEIYNKR---PTSPHLTIYKPQISSTLSILHRMTGVAL 40
>gi|15604003|ref|NP_220518.1| succinate dehydrogenase cytochrome B560 subunit (sdhC)
[Rickettsia prowazekii str. Madrid E]
gi|383486973|ref|YP_005404653.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
prowazekii str. GvV257]
gi|383487549|ref|YP_005405228.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
prowazekii str. Chernikova]
gi|383488395|ref|YP_005406073.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
prowazekii str. Katsinyian]
gi|383489238|ref|YP_005406915.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
prowazekii str. Dachau]
gi|383499373|ref|YP_005412734.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
prowazekii str. BuV67-CWPP]
gi|383500213|ref|YP_005413573.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
prowazekii str. RpGvF24]
gi|386081955|ref|YP_005998532.1| Succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
prowazekii str. Rp22]
gi|729336|sp|P41085.1|DHSC_RICPR RecName: Full=Succinate dehydrogenase cytochrome b556 subunit;
Short=Cytochrome b-556
gi|409934|gb|AAA18325.1| putative hydrophobic subunit of succinate dehydrogenase
[Rickettsia prowazekii str. Madrid E]
gi|3860694|emb|CAA14595.1| SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT (sdhC)
[Rickettsia prowazekii str. Madrid E]
gi|292571719|gb|ADE29634.1| Succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
prowazekii str. Rp22]
gi|380757338|gb|AFE52575.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
prowazekii str. GvV257]
gi|380757910|gb|AFE53146.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
prowazekii str. RpGvF24]
gi|380760428|gb|AFE48950.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
prowazekii str. Chernikova]
gi|380761274|gb|AFE49795.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
prowazekii str. Katsinyian]
gi|380762119|gb|AFE50639.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
prowazekii str. BuV67-CWPP]
gi|380762961|gb|AFE51480.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
prowazekii str. Dachau]
Length = 124
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/29 (79%), Positives = 24/29 (82%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RP SPHLTIYK QI+S LSI HR TGVAL
Sbjct: 12 RPTSPHLTIYKPQISSTLSILHRMTGVAL 40
>gi|328772132|gb|EGF82171.1| hypothetical protein BATDEDRAFT_36733 [Batrachochytrium
dendrobatidis JAM81]
Length = 205
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 47 VRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGL 94
++ERL RP+SPHLTIY+ Q+T LS R T AL A+G GV L
Sbjct: 81 AKSERLHRPISPHLTIYQPQLTWYLSAAFRATSGAL---AVGFYGVAL 125
>gi|365986843|ref|XP_003670253.1| hypothetical protein NDAI_0E01940 [Naumovozyma dairenensis CBS 421]
gi|343769023|emb|CCD25010.1| hypothetical protein NDAI_0E01940 [Naumovozyma dairenensis CBS 421]
Length = 235
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 10 LCNPIASSHLRLLPHIRTITIKPV---AAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQ 66
+ N + + L+ + IR+ T + P+ +++ +R +R RP+SPHLTIY+ Q
Sbjct: 60 MKNTASRTTLQNMMTIRSFTQNSILNENVPSSKDTQDSTILREQRAKRPISPHLTIYQPQ 119
Query: 67 ITSVLSITHR------GTGVALTAYALGLAGV 92
+T LS HR G L A GL G+
Sbjct: 120 LTWYLSSLHRVTLVLMGFAFYLVTIAFGLTGL 151
>gi|51473326|ref|YP_067083.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
typhi str. Wilmington]
gi|383752102|ref|YP_005427202.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
typhi str. TH1527]
gi|383842938|ref|YP_005423441.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
typhi str. B9991CWPP]
gi|81390260|sp|Q68XP1.1|DHSC_RICTY RecName: Full=Succinate dehydrogenase cytochrome b556 subunit;
Short=Cytochrome b-556
gi|51459638|gb|AAU03601.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
typhi str. Wilmington]
gi|380758745|gb|AFE53980.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
typhi str. TH1527]
gi|380759585|gb|AFE54819.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
typhi str. B9991CWPP]
Length = 124
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/29 (79%), Positives = 24/29 (82%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RP SPHLTIYK QI+S LSI HR TGVAL
Sbjct: 12 RPTSPHLTIYKPQISSTLSILHRMTGVAL 40
>gi|345568551|gb|EGX51444.1| hypothetical protein AOL_s00054g143 [Arthrobotrys oligospora ATCC
24927]
Length = 220
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 32/43 (74%), Gaps = 4/43 (9%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA----YALG 88
+RL RP+SPHLTIY+ Q+T LS+T R TGVAL+ YA+G
Sbjct: 94 QRLVRPVSPHLTIYQPQLTWYLSMTTRITGVALSGVFYLYAIG 136
>gi|156376569|ref|XP_001630432.1| predicted protein [Nematostella vectensis]
gi|156217453|gb|EDO38369.1| predicted protein [Nematostella vectensis]
Length = 169
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 28/43 (65%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
KE +NERL RP+SP L YK + ++LS +HR TGV +T
Sbjct: 36 KKEDFFKKNERLKRPMSPFLLTYKFEFPALLSGSHRVTGVIMT 78
>gi|296532571|ref|ZP_06895277.1| succinate dehydrogenase cytochrome b558 subunit [Roseomonas
cervicalis ATCC 49957]
gi|296267096|gb|EFH13015.1| succinate dehydrogenase cytochrome b558 subunit [Roseomonas
cervicalis ATCC 49957]
Length = 148
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 44 GHAVRNERLGRPLSPHLTIYK-LQITSVLSITHRGTGVALT 83
G R+ RPLSPHL +Y LQITS LSI HR TGVA +
Sbjct: 14 GRRTDGTRVNRPLSPHLQVYDMLQITSGLSIAHRATGVAWS 54
>gi|70997878|ref|XP_753671.1| succinate dehydrogenase cytochrome b560 subunit [Aspergillus
fumigatus Af293]
gi|66851307|gb|EAL91633.1| succinate dehydrogenase cytochrome b560 subunit [Aspergillus
fumigatus Af293]
gi|159126596|gb|EDP51712.1| succinate dehydrogenase cytochrome b560 subunit [Aspergillus
fumigatus A1163]
Length = 208
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 34 AAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
AA T + + +RL RP+SPHL+IY+ QIT + S HR TG+AL+
Sbjct: 66 AASTTSQADASKILAQQRLNRPVSPHLSIYRPQITWIGSSAHRITGIALS 115
>gi|385153550|ref|YP_006234154.1| succinate:cytochrome c oxidoreductase subunit 3 (mitochondrion)
[Pyropia haitanensis]
gi|384034953|gb|AFH57665.1| succinate:cytochrome c oxidoreductase subunit 3 (mitochondrion)
[Pyropia haitanensis]
Length = 129
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL----TAYALGLAGVGLTTDI 98
+ L RP+SPHLTIY Q TS SI HR +G+ L T + L V + I
Sbjct: 2 QNLNRPISPHLTIYNFQKTSTFSIWHRISGIILFVSTTCFIFFLNNVYFSYTI 54
>gi|402856904|ref|XP_003893019.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial [Papio anubis]
Length = 169
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG---HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KE +N RP+SPH+TIY + +SI HRGTG+AL+A
Sbjct: 27 AVPLGTTAKEEMERFWNKNISSNRPVSPHITIYSWSLPMAMSICHRGTGIALSA 80
>gi|158562454|gb|ABW74134.1| succinate dehydrogenase cytochrome b560 subunit [Mucor racemosus]
Length = 180
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 35 APTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL-TAYALG 88
A + E +R +R RP+SPHL IY+ QIT LS HR TGVAL A+ LG
Sbjct: 39 AQEQCAAAESELLRQQRKLRPVSPHLQIYQPQITWYLSGLHRVTGVALGGAFYLG 93
>gi|341583395|ref|YP_004763886.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
heilongjiangensis 054]
gi|350273179|ref|YP_004884492.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
japonica YH]
gi|340807621|gb|AEK74209.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
heilongjiangensis 054]
gi|348592392|dbj|BAK96353.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
japonica YH]
Length = 124
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 30/42 (71%), Gaps = 3/42 (7%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+K + N+R P SPHLTIYK QI+S+LSI +R TGVAL
Sbjct: 2 TKTKQEIYNKR---PTSPHLTIYKPQISSILSILYRMTGVAL 40
>gi|109130264|ref|XP_001093391.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like isoform 4 [Macaca mulatta]
gi|355697888|gb|EHH28436.1| hypothetical protein EGK_18874 [Macaca mulatta]
Length = 169
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG---HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KE +N RP+SPH+TIY + +SI HRGTG+AL+A
Sbjct: 27 AVPLGTTAKEEMERFWNKNISSNRPVSPHITIYSWSLPMAMSICHRGTGIALSA 80
>gi|378786346|dbj|BAL63268.1| succinate:cytochrome c oxidoreductase subunit 3 (mitochondrion)
[Pyropia haitanensis]
Length = 129
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL----TAYALGLAGVGLTTDI 98
+ L RP+SPHLTIY Q TS SI HR +G+ L T + L V + I
Sbjct: 2 QNLNRPISPHLTIYNFQKTSTFSIWHRISGIILFVSTTCFIFFLNNVYFSYTI 54
>gi|119479383|ref|XP_001259720.1| succinate dehydrogenase cytochrome b560 subunit [Neosartorya
fischeri NRRL 181]
gi|119407874|gb|EAW17823.1| succinate dehydrogenase cytochrome b560 subunit [Neosartorya
fischeri NRRL 181]
Length = 188
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 34 AAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
AA T + + +RL RP+SPHL+IY+ QIT + S HR TG+AL+
Sbjct: 46 AASTTSQADASKILAQQRLNRPVSPHLSIYRPQITWIGSSAHRITGIALS 95
>gi|313768525|ref|YP_004062200.1| sdhC gene product (mitochondrion) [Gracilariopsis andersonii]
gi|312844652|gb|ADR03216.1| SdhC (mitochondrion) [Gracilariopsis andersonii]
Length = 126
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 25/31 (80%)
Query: 53 GRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
RPLSPHLTIYK Q++S+ SI HR +G+ LT
Sbjct: 3 NRPLSPHLTIYKPQVSSLFSIWHRISGIFLT 33
>gi|302191657|ref|NP_001180516.1| succinate dehydrogenase complex, subunit C, integral membrane
protein, 15kDa [Macaca mulatta]
gi|109086211|ref|XP_001093733.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like isoform 3 [Macaca mulatta]
gi|355558668|gb|EHH15448.1| hypothetical protein EGK_01538 [Macaca mulatta]
Length = 169
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG---HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KE +N RP+SPH+TIY + +SI HRGTG+AL+A
Sbjct: 27 AVPLGTTAKEEMERFWNKNISSNRPVSPHITIYSWSLPMAMSICHRGTGIALSA 80
>gi|154285510|ref|XP_001543550.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150407191|gb|EDN02732.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 187
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 28/35 (80%)
Query: 49 NERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
+RL RP+SPHL+IY+ QIT +LS T+R TGV L+
Sbjct: 60 QQRLNRPVSPHLSIYRPQITWILSSTNRITGVVLS 94
>gi|85714477|ref|ZP_01045465.1| succinate dehydrogenase, cytochrome b subunit [Nitrobacter sp.
Nb-311A]
gi|85698924|gb|EAQ36793.1| succinate dehydrogenase, cytochrome b subunit [Nitrobacter sp.
Nb-311A]
Length = 133
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 24/32 (75%)
Query: 51 RLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
R+ RPLSPHL IY+ +T LSI HR TGVAL
Sbjct: 4 RIERPLSPHLQIYRWTLTMALSIVHRATGVAL 35
>gi|380797697|gb|AFE70724.1| succinate dehydrogenase cytochrome b560 subunit, mitochondrial
isoform 1 precursor, partial [Macaca mulatta]
Length = 165
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG---HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KE +N RP+SPH+TIY + +SI HRGTG+AL+A
Sbjct: 23 AVPLGTTAKEEMERFWNKNISSNRPVSPHITIYSWSLPMAMSICHRGTGIALSA 76
>gi|392383580|ref|YP_005032777.1| succinate dehydrogenase, cytochrome b subunit [Azospirillum
brasilense Sp245]
gi|356878545|emb|CCC99432.1| succinate dehydrogenase, cytochrome b subunit [Azospirillum
brasilense Sp245]
Length = 129
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 25/30 (83%)
Query: 53 GRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
GRPLSPHL +YKL T++LSITHR TGV L
Sbjct: 6 GRPLSPHLQVYKLPRTALLSITHRITGVGL 35
>gi|383316897|ref|YP_005377739.1| succinate dehydrogenase, cytochrome b556 subunit [Frateuria
aurantia DSM 6220]
gi|379044001|gb|AFC86057.1| succinate dehydrogenase, cytochrome b556 subunit [Frateuria
aurantia DSM 6220]
Length = 131
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 22/29 (75%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYK Q+ V SI HR TG+AL
Sbjct: 6 RPLSPHLQIYKWQVQMVTSILHRATGIAL 34
>gi|58698191|ref|ZP_00373112.1| succinate dehydrogenase, cytochrome b556 subunit [Wolbachia
endosymbiont of Drosophila ananassae]
gi|225630885|ref|YP_002727676.1| succinate dehydrogenase, cytochrome b556 subunit [Wolbachia sp.
wRi]
gi|58535272|gb|EAL59350.1| succinate dehydrogenase, cytochrome b556 subunit [Wolbachia
endosymbiont of Drosophila ananassae]
gi|225592866|gb|ACN95885.1| succinate dehydrogenase, cytochrome b556 subunit [Wolbachia sp.
wRi]
Length = 125
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 22/28 (78%)
Query: 53 GRPLSPHLTIYKLQITSVLSITHRGTGV 80
RPLSPHL IYK+Q+TS SI HR TG+
Sbjct: 3 DRPLSPHLQIYKVQVTSFFSIMHRLTGI 30
>gi|111073627|emb|CAL29489.1| SdhC; succinate dehydrogenase b-type cytochrome subunit
[Wolbachia endosymbiont of Onchocerca volvulus]
Length = 125
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 23/28 (82%)
Query: 53 GRPLSPHLTIYKLQITSVLSITHRGTGV 80
RPLSPHL IYK+QIT++ SI HR TG+
Sbjct: 3 DRPLSPHLQIYKIQITNLFSIIHRLTGI 30
>gi|42521018|ref|NP_966933.1| succinate dehydrogenase, cytochrome b556 subunit [Wolbachia
endosymbiont of Drosophila melanogaster]
gi|42410759|gb|AAS14867.1| succinate dehydrogenase, cytochrome b556 subunit [Wolbachia
endosymbiont of Drosophila melanogaster]
Length = 125
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 22/28 (78%)
Query: 53 GRPLSPHLTIYKLQITSVLSITHRGTGV 80
RPLSPHL IYK+Q+TS SI HR TG+
Sbjct: 3 DRPLSPHLQIYKVQVTSFFSIMHRLTGI 30
>gi|402497047|ref|YP_006556307.1| succinate dehydrogenase subunit C sdhC [Wolbachia endosymbiont of
Onchocerca ochengi]
gi|398650320|emb|CCF78490.1| succinate dehydrogenase subunit C sdhC [Wolbachia endosymbiont of
Onchocerca ochengi]
Length = 125
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 23/28 (82%)
Query: 53 GRPLSPHLTIYKLQITSVLSITHRGTGV 80
RPLSPHL IYK+QIT++ SI HR TG+
Sbjct: 3 DRPLSPHLQIYKIQITNLFSIIHRLTGI 30
>gi|88607062|ref|YP_505561.1| succinate dehydrogenase, cytochrome b556 subunit [Anaplasma
phagocytophilum HZ]
gi|46361034|gb|AAL17653.2| succinate dehydrogenase subunit C [Anaplasma phagocytophilum]
gi|88598125|gb|ABD43595.1| succinate dehydrogenase, cytochrome b556 subunit [Anaplasma
phagocytophilum HZ]
Length = 127
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/29 (75%), Positives = 25/29 (86%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL++YKL IT+ LSITHR TGV L
Sbjct: 5 RPLSPHLSVYKLPITAWLSITHRITGVLL 33
>gi|402704048|ref|ZP_10852027.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
helvetica C9P9]
Length = 123
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+K + N+R P SPHL+IYK QI+S LSI HR TGVAL
Sbjct: 2 NKTKQEIYNKR---PTSPHLSIYKPQISSTLSILHRMTGVAL 40
>gi|386399552|ref|ZP_10084330.1| succinate dehydrogenase, cytochrome b556 subunit [Bradyrhizobium
sp. WSM1253]
gi|385740178|gb|EIG60374.1| succinate dehydrogenase, cytochrome b556 subunit [Bradyrhizobium
sp. WSM1253]
Length = 132
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 28/40 (70%)
Query: 51 RLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLA 90
R+ RPLSPH+ +Y+ +T LSI HR TG+AL A L LA
Sbjct: 4 RIERPLSPHMQVYRWTLTMALSIVHRATGIALYAGTLLLA 43
>gi|314908366|gb|ADT62130.1| succinate dehydrogenase subunit 3 [Isoetes engelmannii]
Length = 98
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 26/37 (70%)
Query: 51 RLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYAL 87
++ RPLSPHLTIYK Q+TS SI HR +G L A L
Sbjct: 2 KINRPLSPHLTIYKPQLTSTFSIFHRISGAFLAAKVL 38
>gi|387539366|gb|AFJ70310.1| succinate dehydrogenase cytochrome b560 subunit, mitochondrial
isoform 2 precursor [Macaca mulatta]
Length = 150
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 34 AAPTGVPSKEG---HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KE +N RP+SPH+TIY + +SI HRGTG+AL+A
Sbjct: 27 AVPLGTTAKEEMERFWNKNISSNRPVSPHITIYSWSLPMAMSICHRGTGIALSA 80
>gi|27375623|ref|NP_767152.1| succinate dehydrogenase cytochrome B-556 subunit [Bradyrhizobium
japonicum USDA 110]
gi|3169722|gb|AAC17940.1| succinate dehydrogenase membrane anchor subunit [Bradyrhizobium
japonicum]
gi|27348760|dbj|BAC45777.1| succinate dehydrogenase cytochrome B-556 subunit [Bradyrhizobium
japonicum USDA 110]
Length = 132
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 28/40 (70%)
Query: 51 RLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLA 90
R+ RPLSPH+ +Y+ +T LSI HR TG+AL A L LA
Sbjct: 4 RIERPLSPHMQVYRWTLTMALSIVHRATGIALYAGTLLLA 43
>gi|426198908|gb|EKV48833.1| SDH3 cytochrome b subunit of succinate dehydrogenase [Agaricus
bisporus var. bisporus H97]
Length = 179
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%)
Query: 40 PSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLA 90
PS + + +RL RP SPH TIY+ Q+T + SI +R TG AL+ G A
Sbjct: 45 PSANDNILNKQRLQRPSSPHFTIYQPQLTWLGSIANRVTGAALSTLLYGFA 95
>gi|99035092|ref|ZP_01314880.1| hypothetical protein Wendoof_01000286 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 125
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 22/28 (78%)
Query: 53 GRPLSPHLTIYKLQITSVLSITHRGTGV 80
RPLSPHL IYK+Q+TS SI HR TG+
Sbjct: 3 DRPLSPHLQIYKVQVTSFFSIMHRLTGI 30
>gi|258563078|ref|XP_002582284.1| predicted protein [Uncinocarpus reesii 1704]
gi|237907791|gb|EEP82192.1| predicted protein [Uncinocarpus reesii 1704]
Length = 221
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA--YALGLAGV 92
+RL RP++PH+ IYK QI++VLS R TG+A + Y G+A V
Sbjct: 94 QRLKRPVAPHIAIYKWQISAVLSSLERLTGMAFSGGLYLFGIAYV 138
>gi|409077568|gb|EKM77933.1| SDH3 cytochrome b subunit of succinate dehydrogenase [Agaricus
bisporus var. burnettii JB137-S8]
Length = 167
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%)
Query: 40 PSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLA 90
PS + + +RL RP SPH TIY+ Q+T + SI +R TG AL+ G A
Sbjct: 33 PSANDNILNKQRLQRPSSPHFTIYQPQLTWLGSIANRVTGAALSTLLYGFA 83
>gi|451999915|gb|EMD92377.1| hypothetical protein COCHEDRAFT_1203357 [Cochliobolus
heterostrophus C5]
Length = 177
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 2 NSIFKLSTLCNPIASSHLRLLPHIRTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLT 61
IF+L A+ LR+ P R + + A S+ + +R+ RP+SPHL
Sbjct: 4 QRIFQLG--LRRAAAPGLRVQPAGRMVQRRLAATEHASQSQAAEILAKQRINRPVSPHLA 61
Query: 62 IYKLQITSVLSITHRGTGVALTA--YALGLA 90
IYK QIT + S +R TG+ L+ Y G+A
Sbjct: 62 IYKPQITWIASGLNRITGLTLSGSLYLFGIA 92
>gi|209916098|gb|ACI95893.1| succinate dehydrogenase subunit 3 [Isoetes engelmannii]
gi|217331572|gb|ACK38298.1| succinate dehydrogenase subunit 3 [Isoetes engelmannii]
gi|217331586|gb|ACK38312.1| succinate dehydrogenase subunit 3 [Isoetes engelmannii]
Length = 98
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 26/37 (70%)
Query: 51 RLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYAL 87
++ RPLSPHLTIYK Q+TS SI HR +G L A L
Sbjct: 2 KINRPLSPHLTIYKPQLTSTFSIFHRISGALLAAKVL 38
>gi|294655076|ref|XP_457157.2| DEHA2B04488p [Debaryomyces hansenii CBS767]
gi|199429671|emb|CAG85151.2| DEHA2B04488p [Debaryomyces hansenii CBS767]
Length = 147
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA--YAL 87
+E + +R RP SPHLTIY+LQ+T V+S HR TGV + + YAL
Sbjct: 12 EQEQEVLVAQRKNRPTSPHLTIYQLQLTMVMSGLHRVTGVFMASGFYAL 60
>gi|219112939|ref|XP_002186053.1| succinate dehydrogenase cytochrome b subunit [Phaeodactylum
tricornutum CCAP 1055/1]
gi|209582903|gb|ACI65523.1| succinate dehydrogenase cytochrome b subunit [Phaeodactylum
tricornutum CCAP 1055/1]
Length = 167
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 22 LPHIRTITIKPVAAPTGVPSKE-GHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGV 80
L R++TI ++ +G K+ + R + GRP+SPH+T+Y I +V SIT+R TG
Sbjct: 17 LQATRSMTI--LSKSSGEEYKKMNYTSRMKNSGRPVSPHVTVYNFPIAAVASITNRVTGC 74
Query: 81 ALTAYALGLAGVGL 94
L+ ALGL L
Sbjct: 75 VLSFGALGLGAAEL 88
>gi|392564820|gb|EIW57998.1| succinate dehydrogenase cytochrome b560 subunit [Trametes
versicolor FP-101664 SS1]
Length = 178
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 27 TITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYA 86
T + + + P + H + +RL RP SPH TIY+ Q+T + SI +R TG L+
Sbjct: 32 TFAKRSIQTESLTPKVQEHILNEQRLRRPSSPHFTIYQPQLTWIASIANRVTGAGLSVLL 91
Query: 87 LGLA 90
G A
Sbjct: 92 YGYA 95
>gi|344940254|ref|ZP_08779542.1| succinate dehydrogenase, cytochrome b556 subunit [Methylobacter
tundripaludum SV96]
gi|344261446|gb|EGW21717.1| succinate dehydrogenase, cytochrome b556 subunit [Methylobacter
tundripaludum SV96]
Length = 129
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 25/31 (80%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
RP SPHL +YKL +T ++SITHR TG+ LTA
Sbjct: 7 RPTSPHLQVYKLPLTGIISITHRMTGIMLTA 37
>gi|301102751|ref|XP_002900462.1| transmembrane protein, putative [Phytophthora infestans T30-4]
gi|262101725|gb|EEY59777.1| transmembrane protein, putative [Phytophthora infestans T30-4]
Length = 166
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGL 94
S E ++ LGRP+SPH+ IYK +T+V S+ +R + + ++A +G + +G
Sbjct: 24 STETYSATQSALGRPISPHVEIYKFPVTAVSSVANRFSAMGMSAAFVGGSALGF 77
>gi|58584743|ref|YP_198316.1| succinate dehydrogenase subunit C sdhC [Wolbachia endosymbiont
strain TRS of Brugia malayi]
gi|58419059|gb|AAW71074.1| Succinate dehydrogenase subunit C sdhC [Wolbachia endosymbiont
strain TRS of Brugia malayi]
Length = 125
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 23/29 (79%)
Query: 52 LGRPLSPHLTIYKLQITSVLSITHRGTGV 80
+ RPLSPHL IYK+Q+T+ SI HR TG+
Sbjct: 2 IDRPLSPHLQIYKVQVTNFFSIMHRLTGI 30
>gi|353328370|ref|ZP_08970697.1| succinate dehydrogenase, cytochrome b556 subunit [Wolbachia
endosymbiont wVitB of Nasonia vitripennis]
Length = 125
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 21/27 (77%)
Query: 53 GRPLSPHLTIYKLQITSVLSITHRGTG 79
RPLSPHL IYK+Q+TS SI HR TG
Sbjct: 3 NRPLSPHLQIYKVQVTSFFSIMHRLTG 29
>gi|190571454|ref|YP_001975812.1| succinate dehydrogenase, cytochrome b556 subunit [Wolbachia
endosymbiont of Culex quinquefasciatus Pel]
gi|190357726|emb|CAQ55176.1| succinate dehydrogenase, cytochrome b556 subunit [Wolbachia
endosymbiont of Culex quinquefasciatus Pel]
Length = 123
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 21/27 (77%)
Query: 53 GRPLSPHLTIYKLQITSVLSITHRGTG 79
RPLSPHL IYK+Q+TS SI HR TG
Sbjct: 3 NRPLSPHLQIYKVQVTSFFSIMHRLTG 29
>gi|262277891|ref|ZP_06055684.1| succinate dehydrogenase, cytochrome b556 subunit [alpha
proteobacterium HIMB114]
gi|262224994|gb|EEY75453.1| succinate dehydrogenase, cytochrome b556 subunit [alpha
proteobacterium HIMB114]
Length = 122
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 51 RLGRPLSPHLTIYKLQITSVLSITHRGTGV----ALTAYALGLAGVGLTTDINSVVPTY 105
+ PLSPHL +YK Q++S+LSITHR T + + +AL + + L D+ +
Sbjct: 2 KFESPLSPHLQVYKWQLSSLLSITHRMTSIFNLMGMMFFALWIFMLFLGEDVYKYFEIF 60
>gi|334324337|ref|XP_001381718.2| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like [Monodelphis domestica]
Length = 254
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 34 AAPTGVPSKEG---HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYA--LG 88
A P G +KE +N RPLSPH+TIY + +SI HR +G+AL+A G
Sbjct: 112 AVPLGTTAKEEMEHFWNKNTNSNRPLSPHITIYSWSLPMAMSICHRASGIALSAGVSLFG 171
Query: 89 LAGVGLTTDINSVV 102
LA + L + S V
Sbjct: 172 LAALLLPGNFESHV 185
>gi|6649873|gb|AAF21608.1|AF018287_2 SdhC [papaya bunchy top disease rickettsia]
Length = 125
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGLTTDINS 100
+K + N+R P SPHLTIYK +I+S LSI HR TGVAL LA + + +S
Sbjct: 2 TKTKQEIYNKR---PTSPHLTIYKPRISSTLSILHRMTGVALFFAVSILAWWFIFSKFDS 58
>gi|238650698|ref|YP_002916551.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
peacockii str. Rustic]
gi|238624796|gb|ACR47502.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
peacockii str. Rustic]
Length = 124
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+K + N+R P SPHLTIYK QI+S LSI +R TGVAL
Sbjct: 2 TKTKQEIYNKR---PTSPHLTIYKPQISSTLSILYRMTGVAL 40
>gi|212543951|ref|XP_002152130.1| succinate dehydrogenase, putative [Talaromyces marneffei ATCC
18224]
gi|210067037|gb|EEA21130.1| succinate dehydrogenase, putative [Talaromyces marneffei ATCC
18224]
Length = 200
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 8/67 (11%)
Query: 20 RLLPHIRTITIKP--VAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRG 77
+L+P RT+T P A+P P + +RL RP+SPH+TIYK Q S+ SI R
Sbjct: 43 QLIPSSRTLTTSPRRYASPNLSP------LEKQRLRRPVSPHITIYKWQYQSLTSILQRF 96
Query: 78 TGVALTA 84
+G+ L
Sbjct: 97 SGMFLAG 103
>gi|53804146|ref|YP_114003.1| succinate dehydrogenase, cytochrome b556 subunit [Methylococcus
capsulatus str. Bath]
gi|53757907|gb|AAU92198.1| putative succinate dehydrogenase, cytochrome b556 subunit
[Methylococcus capsulatus str. Bath]
Length = 138
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%), Gaps = 5/49 (10%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVV 102
RPLSPHL +Y+L +T++LSI+HR TGV LG+ +GL + SVV
Sbjct: 16 RPLSPHLQVYRLPVTALLSISHRITGV-----LLGIGLIGLVLVLMSVV 59
>gi|389737450|ref|ZP_10190885.1| succinate dehydrogenase membrane anchor subunit [Rhodanobacter
sp. 115]
gi|388435264|gb|EIL92176.1| succinate dehydrogenase membrane anchor subunit [Rhodanobacter
sp. 115]
Length = 131
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 22/29 (75%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYK Q+ V SI HR TG+AL
Sbjct: 6 RPLSPHLQIYKWQVQMVSSILHRATGIAL 34
>gi|212543953|ref|XP_002152131.1| succinate dehydrogenase, putative [Talaromyces marneffei ATCC
18224]
gi|210067038|gb|EEA21131.1| succinate dehydrogenase, putative [Talaromyces marneffei ATCC
18224]
Length = 199
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 8/67 (11%)
Query: 20 RLLPHIRTITIKP--VAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRG 77
+L+P RT+T P A+P P + +RL RP+SPH+TIYK Q S+ SI R
Sbjct: 42 QLIPSSRTLTTSPRRYASPNLSP------LEKQRLRRPVSPHITIYKWQYQSLTSILQRF 95
Query: 78 TGVALTA 84
+G+ L
Sbjct: 96 SGMFLAG 102
>gi|310800693|gb|EFQ35586.1| succinate dehydrogenase cytochrome b subunit [Glomerella
graminicola M1.001]
Length = 188
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 3 SIFKLSTLCNPIASSHLRLLPHIRTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTI 62
S+F S + +A+SH+ T I+PVA P + +RL RP+SPHL+I
Sbjct: 19 SVFFNSQIPKIVAASHMS------TTQIRPVATTKLTPDDGLDLLAKQRLNRPVSPHLSI 72
Query: 63 YKLQITSV-LSITHRGTGVALTA 84
YK++ T SI R TG L+A
Sbjct: 73 YKMEQTWFGASIWTRITGGGLSA 95
>gi|217039529|gb|ACJ76893.1| mitochondrial succinate dehydrogenase cytochrome b560 subunit C
[Alternaria alternata]
Length = 177
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 15 ASSHLRLLPHIRTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSIT 74
A+ LR+ P R + + A S+ + +R+ RP+SPHL IYK QIT S
Sbjct: 15 AAPSLRVQPAGRMVQRRLAATEHASQSEAAEILAKQRVNRPVSPHLAIYKPQITWYASSL 74
Query: 75 HRGTGVALTA--YALGLA 90
+R TG+ L+ Y G+A
Sbjct: 75 NRITGITLSGSLYLFGIA 92
>gi|374623567|ref|ZP_09696074.1| succinate dehydrogenase subunit C [Ectothiorhodospira sp. PHS-1]
gi|373942675|gb|EHQ53220.1| succinate dehydrogenase subunit C [Ectothiorhodospira sp. PHS-1]
Length = 125
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 27/34 (79%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYAL 87
RPLSPHL +Y+ Q+TSVLSI HR TGV L+ +L
Sbjct: 6 RPLSPHLQVYRPQMTSVLSILHRITGVILSVASL 39
>gi|374318907|ref|YP_005065405.1| Succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
slovaca 13-B]
gi|383750804|ref|YP_005425905.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
slovaca str. D-CWPP]
gi|360041455|gb|AEV91837.1| Succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
slovaca 13-B]
gi|379773818|gb|AFD19174.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
slovaca str. D-CWPP]
Length = 124
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+K + N+R P SPHLTIYK QI+S LSI +R TGVAL
Sbjct: 2 TKTKQEIYNKR---PTSPHLTIYKPQISSTLSILYRMTGVAL 40
>gi|157828041|ref|YP_001494283.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
rickettsii str. 'Sheila Smith']
gi|165932739|ref|YP_001649528.1| succinate dehydrogenase cytochrome b556 subunit [Rickettsia
rickettsii str. Iowa]
gi|378720841|ref|YP_005285728.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
rickettsii str. Colombia]
gi|378722194|ref|YP_005287080.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
rickettsii str. Arizona]
gi|378723553|ref|YP_005288437.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
rickettsii str. Hauke]
gi|379016897|ref|YP_005293132.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
rickettsii str. Brazil]
gi|379017341|ref|YP_005293575.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
rickettsii str. Hino]
gi|379018671|ref|YP_005294905.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
rickettsii str. Hlp#2]
gi|379711908|ref|YP_005300247.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
philipii str. 364D]
gi|157800522|gb|ABV75775.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
rickettsii str. 'Sheila Smith']
gi|165907826|gb|ABY72122.1| succinate dehydrogenase cytochrome b556 subunit [Rickettsia
rickettsii str. Iowa]
gi|376325421|gb|AFB22661.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
rickettsii str. Brazil]
gi|376325865|gb|AFB23104.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
rickettsii str. Colombia]
gi|376327218|gb|AFB24456.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
rickettsii str. Arizona]
gi|376328553|gb|AFB25790.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
philipii str. 364D]
gi|376329906|gb|AFB27142.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
rickettsii str. Hino]
gi|376331251|gb|AFB28485.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
rickettsii str. Hlp#2]
gi|376332568|gb|AFB29801.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
rickettsii str. Hauke]
Length = 124
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+K + N+R P SPHLTIYK QI+S LSI +R TGVAL
Sbjct: 2 TKTKQEIYNKR---PTSPHLTIYKPQISSTLSILYRMTGVAL 40
>gi|328876220|gb|EGG24583.1| succinate dehydrogenase [Dictyostelium fasciculatum]
Length = 216
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 53 GRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RP SPHLTIYKL ++LSITHR TG+A+
Sbjct: 70 NRPTSPHLTIYKLPQPAILSITHRATGIAM 99
>gi|453084121|gb|EMF12166.1| cytochrome b560 subunit of succinate dehydrogenase [Mycosphaerella
populorum SO2202]
Length = 185
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 34 AAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGV 92
AAP + +RL RP++PHL IYK QIT LS +R TGVA++ A L GV
Sbjct: 43 AAPVSPAQANDQILAKQRLNRPVAPHLAIYKPQITWYLSGLNRITGVAVSG-AFYLYGV 100
>gi|15892091|ref|NP_359805.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
conorii str. Malish 7]
gi|229586366|ref|YP_002844867.1| Succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
africae ESF-5]
gi|383483509|ref|YP_005392422.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
parkeri str. Portsmouth]
gi|21362479|sp|Q92J99.1|DHSC_RICCN RecName: Full=Succinate dehydrogenase cytochrome b556 subunit;
Short=Cytochrome b-556
gi|15619214|gb|AAL02706.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
conorii str. Malish 7]
gi|228021416|gb|ACP53124.1| Succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
africae ESF-5]
gi|378935863|gb|AFC74363.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
parkeri str. Portsmouth]
Length = 124
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+K + N+R P SPHLTIYK QI+S LSI +R TGVAL
Sbjct: 2 TKTKQEIYNKR---PTSPHLTIYKPQISSTLSILYRMTGVAL 40
>gi|402863412|ref|XP_003896009.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like [Papio anubis]
Length = 151
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Query: 34 AAPTGVPSKEG-HAVRNERL---GRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KEG N+ + RP+SPH+TIY + +SI H GTG+AL+A
Sbjct: 27 AIPLGTTAKEGMEWFWNKNIMGSNRPVSPHITIYSWSLPMAMSICHSGTGIALSA 81
>gi|34580878|ref|ZP_00142358.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
sibirica 246]
gi|28262263|gb|EAA25767.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia
sibirica 246]
Length = 124
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+K + N+R P SPHLTIYK QI+S LSI +R TGVAL
Sbjct: 2 TKTKQEIYNKR---PTSPHLTIYKPQISSTLSILYRMTGVAL 40
>gi|456351818|dbj|BAM86263.1| succinate dehydrogenase cytochrome b556 subunit [Agromonas
oligotrophica S58]
Length = 132
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 24/32 (75%)
Query: 51 RLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
R+ RPLSPHL Y+ +T +LSI HR TGVAL
Sbjct: 4 RIERPLSPHLQTYRWTLTMILSIVHRATGVAL 35
>gi|328775159|gb|AEB39974.1| succinate dehydrogenase subunit 3 [Funaria hygrometrica]
Length = 131
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 25/32 (78%)
Query: 51 RLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
++ RPLSPHLTIYK Q+TS LSI HR +G L
Sbjct: 2 KINRPLSPHLTIYKPQLTSTLSIFHRISGAFL 33
>gi|453084147|gb|EMF12192.1| Sdh_cyt-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 196
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 49 NERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
+RL RPL+PHL+IYK QITS+ S R TGVA++
Sbjct: 68 QQRLRRPLAPHLSIYKWQITSIPSTLTRITGVAMS 102
>gi|358055011|dbj|GAA98780.1| hypothetical protein E5Q_05468 [Mixia osmundae IAM 14324]
Length = 191
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Query: 34 AAPTGVPSKEG--HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA--YALGL 89
+A T S+E + +R+ RP SPH TIY+ Q+T + SI +R TG AL+ YA L
Sbjct: 47 SASTQALSQEENLQMLNKQRVARPTSPHFTIYEPQLTWLSSIANRVTGSALSGGFYAFAL 106
Query: 90 A-----GVGLTTDINSVV 102
A VG+ D S+V
Sbjct: 107 AYIALPAVGMPFDSASLV 124
>gi|365884956|ref|ZP_09423982.1| Succinate dehydrogenase cytochrome b556 subunit [Bradyrhizobium
sp. ORS 375]
gi|365286504|emb|CCD96513.1| Succinate dehydrogenase cytochrome b556 subunit [Bradyrhizobium
sp. ORS 375]
Length = 132
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 24/32 (75%)
Query: 51 RLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
R+ RPLSPHL Y+ +T +LSI HR TGVAL
Sbjct: 4 RIERPLSPHLQTYRWTLTMILSIVHRATGVAL 35
>gi|109066507|ref|XP_001090560.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like [Macaca mulatta]
Length = 151
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Query: 34 AAPTGVPSKEG-HAVRNERL---GRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A P G +KEG N+ + RP+SPH+TIY + +SI H GTG+AL+A
Sbjct: 27 AIPLGTTAKEGMEWFWNKNITGSNRPVSPHITIYSWSLPMAMSICHSGTGIALSA 81
>gi|78047797|ref|YP_363972.1| succinate dehydrogenase [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|78036227|emb|CAJ23918.1| putative succinate dehydrogenase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 131
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGLT 95
RPLSPHL +Y QI V SI +R TG+ L+ ALG+A LT
Sbjct: 6 RPLSPHLQVYLWQIQMVTSILNRATGIVLSVGALGIAAALLT 47
>gi|319409393|emb|CBI83037.1| SdhC succinate dehydrogenase cytochrome b-556 subunit [Bartonella
schoenbuchensis R1]
Length = 133
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL----TAYALGLAGVGLTTD 97
RP SPHL+IY+ IT +SI HR TGVAL +A+ L + +D
Sbjct: 10 RPYSPHLSIYRWSITMAMSIAHRITGVALYFGMICFAIWLGAIACGSD 57
>gi|365892136|ref|ZP_09430469.1| Succinate dehydrogenase cytochrome b556 subunit [Bradyrhizobium
sp. STM 3809]
gi|365331855|emb|CCE03000.1| Succinate dehydrogenase cytochrome b556 subunit [Bradyrhizobium
sp. STM 3809]
Length = 132
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 24/32 (75%)
Query: 51 RLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
R+ RPLSPHL Y+ +T +LSI HR TGVAL
Sbjct: 4 RIERPLSPHLQTYRWTLTMILSIVHRATGVAL 35
>gi|295841399|dbj|BAJ07113.1| succinate dehydrogenase subunit C [Corynespora cassiicola]
Length = 177
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 15 ASSHLRLLPHIRTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSIT 74
A+ ++ P R + + A S+ + +R+ RP+SPHL+IY+ QIT S
Sbjct: 15 AAPSFKVQPAGRMVQRRAAATQQVNESQAQEILAKQRIQRPVSPHLSIYRPQITWYASSF 74
Query: 75 HRGTGVALTA--YALGLA 90
+R TGVAL+ Y G A
Sbjct: 75 NRITGVALSGGLYLFGFA 92
>gi|390594506|gb|EIN03916.1| succinate dehydrogenase cytochrome b560 subunit [Punctularia
strigosozonata HHB-11173 SS5]
Length = 180
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 39 VPSKEGHAVRNE-RLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLA 90
+P A+ NE RL RP SPH TIY+ Q+T + SI +R TG AL+ G +
Sbjct: 45 LPPSAADAILNEQRLRRPSSPHFTIYQPQLTWIGSIANRMTGAALSVLLYGFS 97
>gi|146337397|ref|YP_001202445.1| succinate dehydrogenase cytochrome b556 subunit [Bradyrhizobium
sp. ORS 278]
gi|146190203|emb|CAL74195.1| Succinate dehydrogenase cytochrome b556 subunit [Bradyrhizobium
sp. ORS 278]
Length = 132
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 24/32 (75%)
Query: 51 RLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
R+ RPLSPHL Y+ +T +LSI HR TGVAL
Sbjct: 4 RIERPLSPHLQTYRWTLTMILSIVHRATGVAL 35
>gi|386828385|ref|ZP_10115492.1| succinate dehydrogenase, cytochrome b556 subunit [Beggiatoa alba
B18LD]
gi|386429269|gb|EIJ43097.1| succinate dehydrogenase, cytochrome b556 subunit [Beggiatoa alba
B18LD]
Length = 127
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 23/30 (76%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALT 83
RPLSPHL IYK Q+TS SI HR TGV L+
Sbjct: 6 RPLSPHLQIYKPQLTSFTSIVHRATGVFLS 35
>gi|367475764|ref|ZP_09475204.1| Succinate dehydrogenase cytochrome b556 subunit [Bradyrhizobium
sp. ORS 285]
gi|365271942|emb|CCD87672.1| Succinate dehydrogenase cytochrome b556 subunit [Bradyrhizobium
sp. ORS 285]
Length = 132
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 49 NERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
R+ RPLSPHL Y+ +T +LSI HR TGVAL
Sbjct: 2 TARIERPLSPHLQTYRWTLTMILSIVHRATGVAL 35
>gi|67903612|ref|XP_682062.1| hypothetical protein AN8793.2 [Aspergillus nidulans FGSC A4]
gi|40741396|gb|EAA60586.1| hypothetical protein AN8793.2 [Aspergillus nidulans FGSC A4]
gi|67517322|gb|AAY68233.1| cytochrome B-560 subunit of succinate dehydrogenase [Emericella
nidulans]
gi|259483001|tpe|CBF78009.1| TPA: Cytochrome B-560 subunit of succinate dehydrogenasePutative
uncharacterized protein ;
[Source:UniProtKB/TrEMBL;Acc:Q5ASD7] [Aspergillus
nidulans FGSC A4]
Length = 191
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 49 NERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
+RL RP+SPHLTIY+ QIT +S HR TG+ L+
Sbjct: 64 EQRLRRPVSPHLTIYRPQITWYMSALHRVTGIILS 98
>gi|221220958|gb|ACM09140.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial
precursor [Salmo salar]
Length = 186
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 31/43 (72%)
Query: 48 RNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLA 90
+N +L RP+SPHL+IYK+++ +LS +HR TG T ++ +A
Sbjct: 51 KNVKLNRPVSPHLSIYKMELPPLLSGSHRTTGFIFTVMSVSVA 93
>gi|381167927|ref|ZP_09877132.1| Succinate dehydrogenase cytochrome b556 subunit [Phaeospirillum
molischianum DSM 120]
gi|380683003|emb|CCG41944.1| Succinate dehydrogenase cytochrome b556 subunit [Phaeospirillum
molischianum DSM 120]
Length = 125
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 24/29 (82%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYK+ T+VLSI+HR TGV +
Sbjct: 6 RPLSPHLQIYKMPFTAVLSISHRITGVVM 34
>gi|91208853|ref|YP_539014.1| succinate dehydrogenase subunit 3 [Physcomitrella patens]
gi|90991393|dbj|BAE93085.1| succinate dehydrogenase subunit 3 (mitochondrion) [Physcomitrella
patens]
Length = 131
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 25/34 (73%)
Query: 51 RLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
++ RPLSPHLTIYK Q+TS SI HR +G L +
Sbjct: 2 KINRPLSPHLTIYKPQLTSTFSIFHRISGAFLAS 35
>gi|358369553|dbj|GAA86167.1| succinate dehydrogenase C subunit [Aspergillus kawachii IFO 4308]
Length = 188
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 49 NERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
+RL RP+SPHL+IY+ QIT + S HR TG+AL+
Sbjct: 61 QQRLNRPVSPHLSIYRPQITWIGSSIHRITGIALS 95
>gi|365855383|ref|ZP_09395436.1| succinate dehydrogenase, cytochrome b556 subunit
[Acetobacteraceae bacterium AT-5844]
gi|363719218|gb|EHM02529.1| succinate dehydrogenase, cytochrome b556 subunit
[Acetobacteraceae bacterium AT-5844]
Length = 161
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 44 GHAVRNERLGRPLSPHLTIYK-LQITSVLSITHRGTGVALT 83
G R+ RPLSPHL +Y LQ+TS LSIT+R GVA T
Sbjct: 28 GRRTDGTRVKRPLSPHLQVYDMLQMTSGLSITNRAAGVAWT 68
>gi|145237506|ref|XP_001391400.1| cytochrome B-560 subunit of succinate dehydrogenase [Aspergillus
niger CBS 513.88]
gi|134075872|emb|CAL00251.1| unnamed protein product [Aspergillus niger]
gi|350635515|gb|EHA23876.1| hypothetical protein ASPNIDRAFT_40064 [Aspergillus niger ATCC
1015]
Length = 188
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 49 NERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
+RL RP+SPHL+IY+ QIT + S HR TG+AL+
Sbjct: 61 QQRLNRPVSPHLSIYRPQITWIGSSIHRITGIALS 95
>gi|226287137|gb|EEH42650.1| succinate dehydrogenase cytochrome b560 subunit [Paracoccidioides
brasiliensis Pb18]
Length = 188
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 27/34 (79%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
+RL RP+SPHL+IY+ Q+T VLS +R TGVAL
Sbjct: 61 QRLNRPVSPHLSIYQPQVTWVLSSLNRITGVALA 94
>gi|324520630|gb|ADY47681.1| Succinate dehydrogenase cytochrome b560 subunit [Ascaris suum]
Length = 192
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 8 STLCNPIASSHLRLLPHIRTITIKPVAAPTGVP-SKEGHAVRNERLGRPLSPHLTIYKLQ 66
+TLC + +++ + ++T + A T + + +R L RP++PHLTIYK Q
Sbjct: 12 ATLCR-VLRHNVKFIRSVQTSAARVSAEKTPIQVWGWDYLMRQRALKRPIAPHLTIYKPQ 70
Query: 67 ITSVLSITHRGTGVALTAYALGLAGVGLT 95
+T ++S HR TG A+ A L + GVG +
Sbjct: 71 MTWMVSGLHRVTGCAM-AGTLLIGGVGFS 98
>gi|352089958|ref|ZP_08954195.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodanobacter
sp. 2APBS1]
gi|389796986|ref|ZP_10200030.1| succinate dehydrogenase membrane anchor subunit [Rhodanobacter
sp. 116-2]
gi|351678494|gb|EHA61640.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodanobacter
sp. 2APBS1]
gi|388447819|gb|EIM03813.1| succinate dehydrogenase membrane anchor subunit [Rhodanobacter
sp. 116-2]
Length = 131
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 22/29 (75%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL +Y+ QI V SI HR TG+AL
Sbjct: 6 RPLSPHLQVYRWQIQMVTSILHRATGIAL 34
>gi|384214205|ref|YP_005605368.1| succinate dehydrogenase cytochrome B-556 subunit [Bradyrhizobium
japonicum USDA 6]
gi|354953101|dbj|BAL05780.1| succinate dehydrogenase cytochrome B-556 subunit [Bradyrhizobium
japonicum USDA 6]
Length = 132
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 24/32 (75%)
Query: 51 RLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
R+ RPLSPH+ +Y+ +T LSI HR TG+AL
Sbjct: 4 RIERPLSPHMQVYRWTLTMALSIVHRATGIAL 35
>gi|225683516|gb|EEH21800.1| succinate dehydrogenase [Paracoccidioides brasiliensis Pb03]
Length = 188
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 27/33 (81%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+RL RP+SPHL+IY+ Q+T VLS +R TGVAL
Sbjct: 61 QRLNRPVSPHLSIYQPQVTWVLSSLNRITGVAL 93
>gi|421595484|ref|ZP_16039515.1| succinate dehydrogenase cytochrome B-556 subunit [Bradyrhizobium
sp. CCGE-LA001]
gi|404272408|gb|EJZ36057.1| succinate dehydrogenase cytochrome B-556 subunit [Bradyrhizobium
sp. CCGE-LA001]
Length = 132
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 24/32 (75%)
Query: 51 RLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
R+ RPLSPH+ +Y+ +T LSI HR TG+AL
Sbjct: 4 RIERPLSPHMQVYRWTLTMALSIVHRATGIAL 35
>gi|394986161|pdb|3VR8|C Chain C, Mitochondrial Rhodoquinol-Fumarate Reductase From The
Parasitic Nematode Ascaris Suum
gi|394986165|pdb|3VR8|G Chain G, Mitochondrial Rhodoquinol-Fumarate Reductase From The
Parasitic Nematode Ascaris Suum
gi|394986169|pdb|3VRB|C Chain C, Mitochondrial Rhodoquinol-Fumarate Reductase From The
Parasitic Nematode Ascaris Suum With The Specific
Inhibitor Flutolanil And Substrate Fumarate
gi|394986173|pdb|3VRB|G Chain G, Mitochondrial Rhodoquinol-Fumarate Reductase From The
Parasitic Nematode Ascaris Suum With The Specific
Inhibitor Flutolanil And Substrate Fumarate
gi|63253076|dbj|BAA11232.2| cytochrome b-large subunit [Ascaris suum]
Length = 188
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 45 HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGLT 95
+ +R L RP++PHLTIYK Q+T ++S HR TG A+ A L + GVG +
Sbjct: 45 YLMRQRALKRPIAPHLTIYKPQMTWMVSGLHRVTGCAM-AGTLLIGGVGFS 94
>gi|241950825|ref|XP_002418135.1| succinate dehydrogenase cytochrome b subunit, mitochondrial
precursor, putative [Candida dubliniensis CD36]
gi|223641474|emb|CAX43435.1| succinate dehydrogenase cytochrome b subunit, mitochondrial
precursor, putative [Candida dubliniensis CD36]
Length = 176
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGL-AGVGLTTDIN 99
++E + +R RP SPHL IY+ Q+T ++S HR TGVA+ GL G T+ +N
Sbjct: 40 NQEQEILVAQRKNRPTSPHLQIYQPQLTWIMSSFHRITGVAMAGAFYGLTCGFAATSILN 99
>gi|92119075|ref|YP_578804.1| succinate dehydrogenase, cytochrome b subunit [Nitrobacter
hamburgensis X14]
gi|91801969|gb|ABE64344.1| succinate dehydrogenase subunit C [Nitrobacter hamburgensis X14]
Length = 132
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 24/32 (75%)
Query: 51 RLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
R+ RPLSPHL IY+ +T LS+ HR TG+AL
Sbjct: 4 RIERPLSPHLQIYRWTLTMALSVVHRATGMAL 35
>gi|402589567|gb|EJW83499.1| cytochrome b-large subunit [Wuchereria bancrofti]
Length = 188
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 37 TGVPSKE---GHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVG 93
T P +E + +R L RP+SPHL +YK Q+T ++S HR TG A+ A L + GVG
Sbjct: 33 TKTPIQEWGWNYLLRQRALKRPISPHLAVYKPQVTWMVSGFHRMTGCAM-AGTLLIGGVG 91
Query: 94 L 94
Sbjct: 92 F 92
>gi|393220986|gb|EJD06471.1| succinate dehydrogenase cytochrome b560 subunit [Fomitiporia
mediterranea MF3/22]
Length = 184
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 40 PSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGL 89
P+K + ++RL RP SPH TIY+ Q+T SI +R TG AL+ G
Sbjct: 48 PAKANDILNSQRLKRPSSPHFTIYQPQLTWYGSIANRITGTALSVLLYGF 97
>gi|353235037|emb|CCA67055.1| related to SDH3-cytochrome b560 subunit of respiratory complex II
[Piriformospora indica DSM 11827]
Length = 173
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Query: 49 NERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA--YALGLA 90
+RL RP SPH+TIY+ QIT SI HR TGV L+ YA L+
Sbjct: 46 KQRLNRPSSPHMTIYEPQITWYGSIAHRITGVGLSVGMYAFFLS 89
>gi|325920388|ref|ZP_08182319.1| succinate dehydrogenase subunit C [Xanthomonas gardneri ATCC
19865]
gi|325549135|gb|EGD20058.1| succinate dehydrogenase subunit C [Xanthomonas gardneri ATCC
19865]
Length = 130
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 26/37 (70%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLA 90
RPLSPHL +Y+ QI V SI HR TG+ L+ AL +A
Sbjct: 6 RPLSPHLQVYRWQIQMVTSILHRATGIILSGGALVIA 42
>gi|295841401|dbj|BAJ07114.1| succinate dehydrogenase subunit C [Corynespora cassiicola]
Length = 177
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 15 ASSHLRLLPHIRTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSIT 74
A+ ++ P R + + A S+ + +R+ RP+SPHL+IY+ QIT S
Sbjct: 15 AAPSFKVQPAGRMVQRRAAATQQVNESQAQEILAKQRIQRPVSPHLSIYRPQITWYASPF 74
Query: 75 HRGTGVALTA--YALGLA 90
+R TGVAL+ Y G A
Sbjct: 75 NRITGVALSGGLYLFGFA 92
>gi|169780850|ref|XP_001824889.1| cytochrome B-560 subunit of succinate dehydrogenase [Aspergillus
oryzae RIB40]
gi|238504946|ref|XP_002383702.1| succinate dehydrogenase cytochrome b560 subunit [Aspergillus
flavus NRRL3357]
gi|83773629|dbj|BAE63756.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220689816|gb|EED46166.1| succinate dehydrogenase cytochrome b560 subunit [Aspergillus
flavus NRRL3357]
Length = 188
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%)
Query: 34 AAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
AA T S + +RL RP+SPHL+IY+ QIT + S HR TG AL+
Sbjct: 46 AATTSNTSDPTKILAQQRLNRPVSPHLSIYRPQITWIGSSFHRITGFALS 95
>gi|451853996|gb|EMD67289.1| hypothetical protein COCSADRAFT_34123 [Cochliobolus sativus
ND90Pr]
Length = 177
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 2 NSIFKLSTLCNPIASSHLRLLPHIRTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLT 61
IF+L A+ LR+ P R + + A S+ + +R+ RP+SPHL
Sbjct: 4 QRIFQLG--LRRAAAPGLRVQPAGRMVQRRLAATEHASQSQAAEILAKQRVNRPVSPHLA 61
Query: 62 IYKLQITSVLSITHRGTGVALTA--YALGLA 90
IY+ QIT + S +R TG+ L+ Y G+A
Sbjct: 62 IYRPQITWIASGLNRITGLTLSGSLYLFGIA 92
>gi|320582704|gb|EFW96921.1| succinate dehydrogenase cytochrome b subunit, mitochondrial
precursor, putative [Ogataea parapolymorpha DL-1]
Length = 170
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%)
Query: 40 PSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
P++E + +R RP SPHL IY+ Q+T +LS HR TGV L A
Sbjct: 34 PAEEQAILVAQRKNRPSSPHLQIYQPQLTWILSSFHRITGVGLAA 78
>gi|407925917|gb|EKG18891.1| Succinate dehydrogenase/Fumarate reductase transmembrane subunit
[Macrophomina phaseolina MS6]
Length = 178
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 31 KPVAAPTGVPSKEGHAV-RNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
+PVA +P+ E +++ +RL RP++PHL+IYK QIT S HR TG L+
Sbjct: 31 RPVATQN-LPANEANSILEKQRLNRPVAPHLSIYKPQITWYGSALHRITGSVLS 83
>gi|154251886|ref|YP_001412710.1| succinate dehydrogenase cytochrome b556 subunit [Parvibaculum
lavamentivorans DS-1]
gi|154155836|gb|ABS63053.1| Succinate dehydrogenase cytochrome b556 subunit [Parvibaculum
lavamentivorans DS-1]
Length = 135
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 46 AVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A + + + RPLSPHL IY++ IT +SI HR TG+ L A
Sbjct: 2 AEQRQAVSRPLSPHLQIYRVTITMAMSIIHRFTGMGLYA 40
>gi|384486264|gb|EIE78444.1| hypothetical protein RO3G_03148 [Rhizopus delemar RA 99-880]
Length = 179
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+ E +R +R RP+SPHL+IY+ QIT LS HR TG A+
Sbjct: 44 AAESELLRQQRKVRPVSPHLSIYQPQITWYLSGAHRVTGAAV 85
>gi|324518019|gb|ADY46982.1| Succinate dehydrogenase cytochrome b560 subunit [Ascaris suum]
Length = 150
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 45 HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGLT 95
+ +R L RP++PHLTIYK Q+T ++S HR TG A+ L + GVG +
Sbjct: 7 YLMRQRALKRPIAPHLTIYKPQMTWMVSGLHRVTGCAMAGTLL-IGGVGFS 56
>gi|170585370|ref|XP_001897457.1| Succinate dehydrogenase cytochrome b560 subunit,
mitochondrialprecursor [Brugia malayi]
gi|158595136|gb|EDP33709.1| Succinate dehydrogenase cytochrome b560 subunit,
mitochondrialprecursor, putative [Brugia malayi]
Length = 188
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 45 HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGL 94
+ +R L RP+SPHL +YK Q+T ++S HR TG A+ A L + GVG
Sbjct: 44 YLLRQRALKRPISPHLAVYKPQVTWMVSGFHRMTGCAM-AGTLLIGGVGF 92
>gi|56416566|ref|YP_153640.1| succinate dehydrogenase cytochrome b556 subunit [Anaplasma
marginale str. St. Maries]
gi|222474934|ref|YP_002563349.1| succinate dehydrogenase cytochrome b556 subunit (sdhC) [Anaplasma
marginale str. Florida]
gi|56387798|gb|AAV86385.1| succinate dehydrogenase cytochrome b556 subunit [Anaplasma
marginale str. St. Maries]
gi|222419070|gb|ACM49093.1| succinate dehydrogenase cytochrome b556 subunit (sdhC) [Anaplasma
marginale str. Florida]
Length = 127
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 24/29 (82%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL +YKL + ++LSITHR +G+ L
Sbjct: 6 RPLSPHLQVYKLPVAALLSITHRASGLFL 34
>gi|380495405|emb|CCF32420.1| succinate dehydrogenase cytochrome b560 subunit [Colletotrichum
higginsianum]
Length = 113
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 3 SIFKLSTLCNPIASSHLRLLPHIRTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTI 62
S+F S + +ASS + T I+PVA P + +RL RP+SPHLTI
Sbjct: 19 SVFFNSQIPKIVASSSMS------TTQIRPVATSKLTPDDGLELLAKQRLNRPISPHLTI 72
Query: 63 YKLQITSV-LSITHRGTGVALT 83
YK++ T SI R TG L+
Sbjct: 73 YKIEQTWFGASIWTRITGAGLS 94
>gi|357406018|ref|YP_004917942.1| succinate dehydrogenase cytochrome b556 subunit [Methylomicrobium
alcaliphilum 20Z]
gi|351718683|emb|CCE24357.1| Succinate dehydrogenase cytochrome b556 subunit [Methylomicrobium
alcaliphilum 20Z]
Length = 126
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 25/30 (83%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALT 83
RPLSPHL +Y+L +T ++SITHR TGV L+
Sbjct: 6 RPLSPHLQVYRLPLTGLISITHRMTGVMLS 35
>gi|433676052|ref|ZP_20508207.1| succinate dehydrogenase cytochrome b-556 subunit [Xanthomonas
translucens pv. translucens DSM 18974]
gi|440733135|ref|ZP_20912907.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
translucens DAR61454]
gi|430818845|emb|CCP38470.1| succinate dehydrogenase cytochrome b-556 subunit [Xanthomonas
translucens pv. translucens DSM 18974]
gi|440364327|gb|ELQ01460.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
translucens DAR61454]
Length = 130
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 26/37 (70%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLA 90
RPLSPHL +Y+ QI V SI HR TG+ L+ AL +A
Sbjct: 6 RPLSPHLQVYRWQIQMVTSILHRATGIILSVGALIIA 42
>gi|353526549|ref|YP_004927618.1| succinate dehydrogenase subunit 3 (mitochondrion) [Anomodon
rugelii]
gi|336089475|gb|AEH99665.1| succinate dehydrogenase subunit 3 [Anomodon rugelii]
Length = 131
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 24/32 (75%)
Query: 51 RLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
++ RPLSPHLTIYK Q+TS SI HR +G L
Sbjct: 2 KINRPLSPHLTIYKPQLTSTFSIFHRISGAFL 33
>gi|83313049|ref|YP_423313.1| succinate dehydrogenase/fumarate reductase, cytochrome b subunit
[Magnetospirillum magneticum AMB-1]
gi|82947890|dbj|BAE52754.1| Succinate dehydrogenase/fumarate reductase, cytochrome b subunit
[Magnetospirillum magneticum AMB-1]
Length = 125
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 6/46 (13%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALT------AYALGLAGVG 93
RPLSPH+ +Y++ T++LSI+HR TGVAL AY L A G
Sbjct: 6 RPLSPHIQVYRMPFTAILSISHRITGVALAVGTVVLAYWLASAAYG 51
>gi|262186706|ref|YP_003275965.1| succinate dehydrogenase subunit 3 (mitochondrion) [Pleurozia
purpurea]
gi|237780703|gb|ACR19349.1| succinate dehydrogenase subunit 3 [Pleurozia purpurea]
Length = 137
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 24/32 (75%)
Query: 51 RLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
++ RPLSPHLTIYK Q+TS SI HR +G L
Sbjct: 2 KINRPLSPHLTIYKPQLTSTFSIFHRISGAFL 33
>gi|261202338|ref|XP_002628383.1| succinate dehydrogenase cytochrome b560 subunit [Ajellomyces
dermatitidis SLH14081]
gi|239590480|gb|EEQ73061.1| succinate dehydrogenase cytochrome b560 subunit [Ajellomyces
dermatitidis SLH14081]
gi|239612206|gb|EEQ89193.1| succinate dehydrogenase cytochrome b560 subunit [Ajellomyces
dermatitidis ER-3]
gi|327353150|gb|EGE82007.1| succinate dehydrogenase cytochrome b560 subunit [Ajellomyces
dermatitidis ATCC 18188]
Length = 187
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 27/33 (81%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+RL RP+SPHL+IY+ QIT +LS +R TGVAL
Sbjct: 61 QRLNRPVSPHLSIYQPQITWLLSSLNRITGVAL 93
>gi|389780795|ref|ZP_10194328.1| succinate dehydrogenase membrane anchor subunit [Rhodanobacter
spathiphylli B39]
gi|388435939|gb|EIL92827.1| succinate dehydrogenase membrane anchor subunit [Rhodanobacter
spathiphylli B39]
Length = 131
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 25/34 (73%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYAL 87
RPLSPHL IY+ Q+ + SITHR TG+AL +L
Sbjct: 6 RPLSPHLQIYRKQVQMMTSITHRATGIALAVGSL 39
>gi|11467108|ref|NP_054409.1| succinate dehydrogenase subunit 3 [Marchantia polymorpha]
gi|543911|sp|P35721.1|C560_MARPO RecName: Full=Succinate dehydrogenase cytochrome b560 subunit;
AltName: Full=Succinate dehydrogenase, subunit III
gi|786193|gb|AAC09406.1| ORF137 [Marchantia polymorpha]
Length = 137
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 25/37 (67%)
Query: 51 RLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYAL 87
++ RPLSPHLTIYK Q+TS SI HR +G L L
Sbjct: 2 KINRPLSPHLTIYKPQLTSTFSIFHRISGAFLATMVL 38
>gi|398391016|ref|XP_003848968.1| succinate dehydrogenase cytochrome B subunit, partial
[Zymoseptoria tritici IPO323]
gi|339468844|gb|EGP83944.1| succinate dehydrogenase cytochrome B subunit [Zymoseptoria
tritici IPO323]
Length = 126
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA--YALG 88
+RL RP++PHLT Y+ +I VLS +R TGVAL+ YA G
Sbjct: 4 QRLNRPIAPHLTTYRWRINMVLSSLNRITGVALSGAFYAFG 44
>gi|149248046|ref|XP_001528410.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146448364|gb|EDK42752.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 189
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA--YAL 87
++E + +R RP+SPHL IY+ Q+T ++S HR TGVAL YAL
Sbjct: 53 NEEQEVLVAQRKNRPVSPHLQIYQPQLTWIMSSFHRITGVALAGAFYAL 101
>gi|395825349|ref|XP_003785899.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial [Otolemur garnettii]
Length = 189
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 34 AAPTGVPSKEG---HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
A P G +KE +N RP+SPH+TIY + +SI HRGTG+A++
Sbjct: 47 AVPLGTTAKEEMERFWNKNTSSNRPVSPHVTIYSWSLPMAMSICHRGTGIAVS 99
>gi|384419526|ref|YP_005628886.1| succinate dehydrogenase, cytochromeb556 subunit [Xanthomonas
oryzae pv. oryzicola BLS256]
gi|353462439|gb|AEQ96718.1| succinate dehydrogenase, cytochromeb556 subunit [Xanthomonas
oryzae pv. oryzicola BLS256]
Length = 131
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGLT 95
RPLSPHL +Y+ QI V SI +R TG+ LT AL +A LT
Sbjct: 6 RPLSPHLQVYRWQIQMVTSILNRATGIVLTVGALVIAAALLT 47
>gi|285018596|ref|YP_003376307.1| succinate dehydrogenase cytochrome b subunit protein [Xanthomonas
albilineans GPE PC73]
gi|283473814|emb|CBA16316.1| putative succinate dehydrogenase_cytochrome b subunit protein
[Xanthomonas albilineans GPE PC73]
Length = 130
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 21/30 (70%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALT 83
RPLSPHL +Y+ QI V SI HR TG+ L
Sbjct: 6 RPLSPHLQVYRWQIQMVTSIVHRATGIVLA 35
>gi|58581933|ref|YP_200949.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
oryzae pv. oryzae KACC 10331]
gi|84623845|ref|YP_451217.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
oryzae pv. oryzae MAFF 311018]
gi|50313515|gb|AAT74619.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
oryzae pv. oryzae]
gi|58426527|gb|AAW75564.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
oryzae pv. oryzae KACC 10331]
gi|84367785|dbj|BAE68943.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
oryzae pv. oryzae MAFF 311018]
Length = 131
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGLT 95
RPLSPHL +Y+ QI V SI +R TG+ LT AL +A LT
Sbjct: 6 RPLSPHLQVYRWQIQMVTSILNRATGIVLTVGALVIAAALLT 47
>gi|324520449|gb|ADY47640.1| Succinate dehydrogenase cytochrome b560 subunit [Ascaris suum]
Length = 142
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 47 VRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGLT 95
+R L RP++PHLTIYK Q+T ++S HR TG A+ L + GVG +
Sbjct: 1 MRQRALKRPIAPHLTIYKPQMTWMVSGLHRVTGCAMAGTLL-IGGVGFS 48
>gi|50308981|ref|XP_454496.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643631|emb|CAG99583.1| KLLA0E12123p [Kluyveromyces lactis]
Length = 181
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 14/80 (17%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL--------------TAYA 86
+E + ++R RP+SPHLTIY+ Q+T LS HR +GV L T +
Sbjct: 45 QEEYELLVSQRKVRPVSPHLTIYQPQLTWYLSSVHRVSGVFLGLAFYAVTIAFGVSTVFG 104
Query: 87 LGLAGVGLTTDINSVVPTYL 106
LG++ L N +P+++
Sbjct: 105 LGMSTENLVQFYNEKIPSWI 124
>gi|336371061|gb|EGN99401.1| SDHC, cytochrome b subunit of succinate dehydrogenase [Serpula
lacrymans var. lacrymans S7.3]
Length = 178
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 40 PSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLA 90
PS + +R+ RP SPH TIY+ Q+T + SI +R TG AL+A G +
Sbjct: 45 PSAATDILNKQRIKRPSSPHFTIYQPQLTWIGSIVNRMTGGALSALLYGFS 95
>gi|115400139|ref|XP_001215658.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114191324|gb|EAU33024.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 188
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 26/35 (74%)
Query: 49 NERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
+RL RP+SPHLTIY+ QIT S +R TGVAL+
Sbjct: 61 KQRLNRPVSPHLTIYRPQITWYASAFNRITGVALS 95
>gi|393241558|gb|EJD49080.1| cytochrome b560 subunit of succinate dehydrogenase [Auricularia
delicata TFB-10046 SS5]
Length = 181
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 40 PSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA--YALGLAGV----- 92
P + +RL RP SPH TIY+ QIT SI +R TGV L+ Y LA V
Sbjct: 45 PEAVNEILNTQRLKRPSSPHFTIYQPQITWYGSIANRFTGVGLSVVLYGFSLAYVIAPYA 104
Query: 93 GLTTDINSVV 102
GL D +VV
Sbjct: 105 GLPFDSAAVV 114
>gi|326468741|gb|EGD92750.1| succinate dehydrogenase C subunit [Trichophyton tonsurans CBS
112818]
gi|326481350|gb|EGE05360.1| succinate dehydrogenase cytochrome b560 subunit [Trichophyton
equinum CBS 127.97]
Length = 191
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 34 AAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
AAP+G S+ + +RL RP+SPHL+IY+ QIT LS +R TG L+
Sbjct: 50 AAPSGA-SEPNSILAKQRLNRPISPHLSIYRPQITWYLSSLNRITGAILS 98
>gi|86747453|ref|YP_483949.1| succinate dehydrogenase, cytochrome b subunit [Rhodopseudomonas
palustris HaA2]
gi|86570481|gb|ABD05038.1| succinate dehydrogenase subunit C [Rhodopseudomonas palustris
HaA2]
Length = 132
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 23/32 (71%)
Query: 51 RLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
R+ RPLSPH+ Y+ +T LSI HR TG+AL
Sbjct: 4 RIDRPLSPHMQAYRWSLTMALSIVHRATGIAL 35
>gi|395783778|ref|ZP_10463627.1| succinate dehydrogenase, cytochrome b556 subunit [Bartonella
melophagi K-2C]
gi|395425900|gb|EJF92060.1| succinate dehydrogenase, cytochrome b556 subunit [Bartonella
melophagi K-2C]
Length = 133
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL----TAYALGLAGVGLTTD 97
RP SPHL+IY+ IT +SI HR TGVAL +A+ L + D
Sbjct: 10 RPYSPHLSIYRWSITMAMSIAHRITGVALYFGMICFAIWLGAIACGGD 57
>gi|386814555|ref|ZP_10101773.1| succinate dehydrogenase, cytochrome b556 subunit [Thiothrix nivea
DSM 5205]
gi|386419131|gb|EIJ32966.1| succinate dehydrogenase, cytochrome b556 subunit [Thiothrix nivea
DSM 5205]
Length = 125
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL +YK+ + ++LS+ HRGTG+ L
Sbjct: 7 RPLSPHLQVYKMPLPAILSVLHRGTGIVL 35
>gi|336383816|gb|EGO24965.1| cytochrome b subunit of succinate dehydrogenase, Sdh3p [Serpula
lacrymans var. lacrymans S7.9]
Length = 177
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 40 PSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLA 90
PS + +R+ RP SPH TIY+ Q+T + SI +R TG AL+A G +
Sbjct: 44 PSAATDILNKQRIKRPSSPHFTIYQPQLTWIGSIVNRMTGGALSALLYGFS 94
>gi|373450983|ref|ZP_09542923.1| Succinate dehydrogenase cytochrome b556 subunit [Wolbachia
pipientis wAlbB]
gi|371931830|emb|CCE77941.1| Succinate dehydrogenase cytochrome b556 subunit [Wolbachia
pipientis wAlbB]
Length = 125
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 21/27 (77%)
Query: 53 GRPLSPHLTIYKLQITSVLSITHRGTG 79
RPLSP+L IYK+Q+TS SI HR TG
Sbjct: 3 NRPLSPYLQIYKVQVTSFFSIMHRLTG 29
>gi|353526594|ref|YP_004927662.1| succinate dehydrogenase subunit 3 (mitochondrion) [Treubia
lacunosa]
gi|336089520|gb|AEH99709.1| succinate dehydrogenase subunit 3 [Treubia lacunosa]
Length = 137
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 24/32 (75%)
Query: 51 RLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
++ RPLSPHLTIYK Q+TS SI HR +G L
Sbjct: 2 KINRPLSPHLTIYKPQLTSTFSIFHRISGAFL 33
>gi|374571973|ref|ZP_09645069.1| succinate dehydrogenase, cytochrome b556 subunit [Bradyrhizobium
sp. WSM471]
gi|374420294|gb|EHQ99826.1| succinate dehydrogenase, cytochrome b556 subunit [Bradyrhizobium
sp. WSM471]
Length = 132
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 27/40 (67%)
Query: 51 RLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLA 90
R+ RPLSPH+ Y+ +T LSI HR TG+AL A L LA
Sbjct: 4 RIERPLSPHIQTYRWTLTMALSIVHRATGIALYAGTLLLA 43
>gi|378786320|dbj|BAL63251.1| succinate:cytochrome c oxidoreductase subunit 3 (mitochondrion)
[Pyropia dentata]
Length = 127
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYAL 87
RP+SPHLTIY Q +S LSI HR +G+ + A+
Sbjct: 2 HNFNRPISPHLTIYNFQKSSTLSIWHRISGIVMFVIAI 39
>gi|302505419|ref|XP_003014416.1| hypothetical protein ARB_06978 [Arthroderma benhamiae CBS 112371]
gi|291178237|gb|EFE34027.1| hypothetical protein ARB_06978 [Arthroderma benhamiae CBS 112371]
Length = 197
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 34 AAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
AAP+G ++ + + +RL RP+SPHL+IY+ QIT LS +R TG L+
Sbjct: 56 AAPSGA-AETNNILAKQRLNRPVSPHLSIYRPQITWYLSSLNRITGAILS 104
>gi|255949166|ref|XP_002565350.1| Pc22g14260 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592367|emb|CAP98714.1| Pc22g14260 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 187
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 26/35 (74%)
Query: 49 NERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
+RL RP++PHLTIYK QI + S HR TGVAL+
Sbjct: 60 KQRLNRPVAPHLTIYKPQIGWIGSSLHRITGVALS 94
>gi|19075212|ref|NP_587712.1| succinate dehydrogenase cytochrome B subunit [Schizosaccharomyces
pombe 972h-]
gi|74582587|sp|O74882.1|SDH3_SCHPO RecName: Full=Succinate dehydrogenase cytochrome B subunit,
mitochondrial; Flags: Precursor
gi|3646453|emb|CAA20917.1| succinate dehydrogenase (ubiquinone) cytochrome b subunit
(predicted) [Schizosaccharomyces pombe]
Length = 180
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 13/95 (13%)
Query: 25 IRTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVA--- 81
+R + + +A ++ + ++R+ RP SPHLTIY+ Q+T LS HR TG
Sbjct: 29 LRNVWRRSIATEHLTQTEANSRLASQRVHRPNSPHLTIYEPQLTWYLSSLHRITGCVVAG 88
Query: 82 -LTAYALG-----LAGVGLTTDINS----VVPTYL 106
L A+A+G LAG L T S VPT++
Sbjct: 89 TLYAFAMGYLVAPLAGYSLDTATISGLIQQVPTWI 123
>gi|357629692|gb|EHJ78310.1| putative succinate dehydrogenase [Danaus plexippus]
Length = 210
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 28 ITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYA 86
IT +P AP H +N L RP+SPHLTI+ + ++ SI R TG+ +T YA
Sbjct: 69 ITYQPYTAP----PPTCHDFKNMSLNRPMSPHLTIFAPTLPAMTSIVQRITGMIITFYA 123
>gi|153868748|ref|ZP_01998495.1| Succinate dehydrogenase, cytochrome b subunit [Beggiatoa sp. PS]
gi|152074659|gb|EDN71493.1| Succinate dehydrogenase, cytochrome b subunit [Beggiatoa sp. PS]
Length = 130
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 25/30 (83%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALT 83
+PLSPHL IYK Q+TS++SI HR TGV L+
Sbjct: 4 QPLSPHLQIYKPQLTSIMSILHRITGVFLS 33
>gi|399088538|ref|ZP_10753573.1| succinate dehydrogenase, cytochrome b556 subunit [Caulobacter sp.
AP07]
gi|398030674|gb|EJL24080.1| succinate dehydrogenase, cytochrome b556 subunit [Caulobacter sp.
AP07]
Length = 135
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 28/42 (66%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGLT 95
RPLSPHL +++ IT SI HRG+ +AL AL LAG L+
Sbjct: 11 RPLSPHLQVWRWHITMACSILHRGSVMALYVGALLLAGWALS 52
>gi|323398684|ref|YP_004222759.1| succinate dehydrogenase subunit 3 [Glaucocystis nostochinearum]
gi|321401377|gb|ADW83131.1| succinate dehydrogenase subunit 3 [Glaucocystis nostochinearum]
Length = 142
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 27/33 (81%)
Query: 52 LGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
RP+SPHL+IYK+QI S+LSIT+R + + L++
Sbjct: 3 FNRPISPHLSIYKIQINSLLSITNRISSLVLSS 35
>gi|333983833|ref|YP_004513043.1| succinate dehydrogenase, cytochrome b556 subunit [Methylomonas
methanica MC09]
gi|333807874|gb|AEG00544.1| succinate dehydrogenase, cytochrome b556 subunit [Methylomonas
methanica MC09]
Length = 123
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 25/30 (83%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALT 83
RPLSPHL +Y+L +T ++SITHR TGV L+
Sbjct: 5 RPLSPHLQVYRLPLTGLISITHRMTGVLLS 34
>gi|391867227|gb|EIT76477.1| succinate dehydrogenase, cytochrome b subunit [Aspergillus oryzae
3.042]
Length = 188
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 49 NERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
+RL RP+SPHL+IY+ QIT + S HR TG AL+
Sbjct: 61 QQRLNRPVSPHLSIYRPQITWIGSSFHRITGFALS 95
>gi|365899528|ref|ZP_09437423.1| Succinate dehydrogenase cytochrome b556 subunit [Bradyrhizobium
sp. STM 3843]
gi|365419719|emb|CCE09965.1| Succinate dehydrogenase cytochrome b556 subunit [Bradyrhizobium
sp. STM 3843]
Length = 132
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 24/32 (75%)
Query: 51 RLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
R+ RPLSPH+ Y+ +T +LSI HR TG+AL
Sbjct: 4 RIERPLSPHIQTYRWTLTMILSIVHRATGIAL 35
>gi|295666820|ref|XP_002793960.1| succinate dehydrogenase cytochrome B subunit [Paracoccidioides
sp. 'lutzii' Pb01]
gi|226277613|gb|EEH33179.1| succinate dehydrogenase cytochrome B subunit [Paracoccidioides
sp. 'lutzii' Pb01]
Length = 188
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
+RL RP+SPHL+IY+ Q+T VLS +R TG+AL
Sbjct: 61 QRLNRPVSPHLSIYQPQVTWVLSSLNRITGLALA 94
>gi|149040637|gb|EDL94594.1| succinate dehydrogenase complex, subunit C, integral membrane
protein, isoform CRA_a [Rattus norvegicus]
Length = 132
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 26/37 (70%)
Query: 48 RNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
+N RP+SPHLTIY+ + +S+ HRG+G+A++
Sbjct: 7 KNTSSNRPVSPHLTIYRWSLPMAMSVCHRGSGIAMSG 43
>gi|149040639|gb|EDL94596.1| succinate dehydrogenase complex, subunit C, integral membrane
protein, isoform CRA_c [Rattus norvegicus]
Length = 150
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 26/37 (70%)
Query: 48 RNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
+N RP+SPHLTIY+ + +S+ HRG+G+A++
Sbjct: 25 KNTSSNRPVSPHLTIYRWSLPMAMSVCHRGSGIAMSG 61
>gi|260946711|ref|XP_002617653.1| hypothetical protein CLUG_03097 [Clavispora lusitaniae ATCC 42720]
gi|238849507|gb|EEQ38971.1| hypothetical protein CLUG_03097 [Clavispora lusitaniae ATCC 42720]
Length = 180
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 33/61 (54%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGLTTDINS 100
+E + +R RP+SPHL IYK Q+T +LS HR TGV + GL T + S
Sbjct: 45 EQEQELLVAQRKNRPVSPHLDIYKPQLTWLLSGLHRLTGVGMAGAFYGLTVTYAATSLLS 104
Query: 101 V 101
V
Sbjct: 105 V 105
>gi|327300971|ref|XP_003235178.1| succinate dehydrogenase C subunit [Trichophyton rubrum CBS
118892]
gi|326462530|gb|EGD87983.1| succinate dehydrogenase C subunit [Trichophyton rubrum CBS
118892]
Length = 191
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 34 AAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
AAP+G ++ + + +RL RP+SPHL+IY+ QIT LS +R TG L+
Sbjct: 50 AAPSGT-AEPNNILAKQRLNRPVSPHLSIYRPQITWYLSSLNRITGAILS 98
>gi|189184864|ref|YP_001938649.1| succinate dehydrogenase cytochrome b-556 subunit [Orientia
tsutsugamushi str. Ikeda]
gi|189181635|dbj|BAG41415.1| succinate dehydrogenase cytochrome b-556 subunit [Orientia
tsutsugamushi str. Ikeda]
Length = 127
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 26/29 (89%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RP+SPH+TIY++Q++ +LSI HR +G+A+
Sbjct: 10 RPMSPHITIYRMQMSMILSILHRLSGMAV 38
>gi|154245910|ref|YP_001416868.1| succinate dehydrogenase cytochrome b556 subunit [Xanthobacter
autotrophicus Py2]
gi|154159995|gb|ABS67211.1| Succinate dehydrogenase cytochrome b556 subunit [Xanthobacter
autotrophicus Py2]
Length = 133
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 24/33 (72%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+R+ RPLSPHL IY+ T V+SI HR TGV L
Sbjct: 6 QRIDRPLSPHLQIYRPLFTMVMSIVHRITGVGL 38
>gi|452003849|gb|EMD96306.1| hypothetical protein COCHEDRAFT_1191388 [Cochliobolus
heterostrophus C5]
Length = 172
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 10/70 (14%)
Query: 43 EGHAVR---NERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA--YALGLAGV----- 92
+G A + +RL RP+SPHL+IY+ QI SV S R TG+ L+ Y G+A +
Sbjct: 35 QGQAAKIIAEQRLQRPVSPHLSIYRPQINSVTSTLQRITGLTLSGCLYLFGIAYLVAPYT 94
Query: 93 GLTTDINSVV 102
G D S+V
Sbjct: 95 GWHVDTTSIV 104
>gi|115522538|ref|YP_779449.1| succinate dehydrogenase, cytochrome b subunit [Rhodopseudomonas
palustris BisA53]
gi|115516485|gb|ABJ04469.1| succinate dehydrogenase subunit C [Rhodopseudomonas palustris
BisA53]
Length = 132
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
R+ RPLSPH+ Y+ +T LSI HR TGVAL
Sbjct: 3 SRIERPLSPHMQAYRWTLTMTLSIVHRATGVAL 35
>gi|366987197|ref|XP_003673365.1| hypothetical protein NCAS_0A04200 [Naumovozyma castellii CBS 4309]
gi|342299228|emb|CCC66978.1| hypothetical protein NCAS_0A04200 [Naumovozyma castellii CBS 4309]
Length = 204
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHR------GTGVALTAYALGLAGVGLTTDINS 100
+R RP+SPHLTIY+ Q+T LS HR G G L G AG+ +D NS
Sbjct: 76 QRGNRPISPHLTIYQPQLTWYLSTCHRISLVFMGFGFYLITILFGAAGLLGFSDFNS 132
>gi|302667796|ref|XP_003025478.1| hypothetical protein TRV_00347 [Trichophyton verrucosum HKI 0517]
gi|291189589|gb|EFE44867.1| hypothetical protein TRV_00347 [Trichophyton verrucosum HKI 0517]
Length = 191
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 34 AAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
AAP+G ++ + + +RL RP+SPHL+IY+ QIT LS +R TG L+
Sbjct: 50 AAPSGT-AEPNNILAKQRLNRPVSPHLSIYRPQITWYLSSLNRITGAILS 98
>gi|388857480|emb|CCF48988.1| related to SDH3-cytochrome b560 subunit of respiratory complex II
[Ustilago hordei]
Length = 199
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 41 SKEGHAVRNE-RLGRPLSPHLTIYKLQITSVLSITHR--GTGVALTAYALGLAGVG 93
+E + NE R RP SPH TIY+ QIT LSI +R GTG+++ YA A VG
Sbjct: 59 QQENLDLLNEQRAKRPSSPHFTIYQPQITWYLSIINRITGTGLSVLMYAYFSAYVG 114
>gi|404474500|ref|YP_006665893.1| succinate:cytochrome c oxidoreductase subunit 3 (mitochondrion)
[Porphyra umbilicalis]
gi|378554627|gb|AFC17796.1| succinate:cytochrome c oxidoreductase subunit 3 (mitochondrion)
[Porphyra umbilicalis]
Length = 127
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 52 LGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+ RP+SPHLTIY Q +S+ SI HR +GVA+
Sbjct: 4 INRPISPHLTIYNAQKSSLFSIWHRISGVAM 34
>gi|424792696|ref|ZP_18218900.1| succinate dehydrogenase (ubiquinone) cytochromesubunit
[Xanthomonas translucens pv. graminis ART-Xtg29]
gi|422796970|gb|EKU25381.1| succinate dehydrogenase (ubiquinone) cytochromesubunit
[Xanthomonas translucens pv. graminis ART-Xtg29]
Length = 130
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALT 83
RPLSPHL +Y+ QI V SI HR TG+ L+
Sbjct: 6 RPLSPHLQVYRWQIQMVTSILHRATGIILS 35
>gi|194365313|ref|YP_002027923.1| succinate dehydrogenase, cytochrome b556 subunit
[Stenotrophomonas maltophilia R551-3]
gi|194348117|gb|ACF51240.1| succinate dehydrogenase, cytochrome b556 subunit
[Stenotrophomonas maltophilia R551-3]
Length = 130
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 25/37 (67%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLA 90
RPLSPHL +Y+ QI SI HR TGV L+ AL +A
Sbjct: 6 RPLSPHLQVYRWQIQMATSILHRATGVFLSVGALIIA 42
>gi|190573776|ref|YP_001971621.1| succinate dehydrogenase cytochrome b-556 subunit
[Stenotrophomonas maltophilia K279a]
gi|408823915|ref|ZP_11208805.1| succinate dehydrogenase membrane anchor subunit [Pseudomonas
geniculata N1]
gi|424668194|ref|ZP_18105219.1| succinate dehydrogenase, cytochrome b556 subunit
[Stenotrophomonas maltophilia Ab55555]
gi|190011698|emb|CAQ45317.1| putative succinate dehydrogenase cytochrome b-556 subunit
[Stenotrophomonas maltophilia K279a]
gi|401068456|gb|EJP76980.1| succinate dehydrogenase, cytochrome b556 subunit
[Stenotrophomonas maltophilia Ab55555]
Length = 130
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 25/37 (67%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLA 90
RPLSPHL +Y+ QI SI HR TGV L+ AL +A
Sbjct: 6 RPLSPHLQVYRWQIQMATSILHRATGVFLSVGALIIA 42
>gi|170729589|ref|YP_001775022.1| succinate dehydrogenase membrane anchor subunit [Xylella
fastidiosa M12]
gi|167964382|gb|ACA11392.1| succinate dehydrogenase membrane anchor subunit [Xylella
fastidiosa M12]
Length = 151
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALT 83
RPLSPHL IY+ Q+ V SI HR TGV L+
Sbjct: 26 RPLSPHLQIYRWQMQMVTSILHRATGVFLS 55
>gi|289665883|ref|ZP_06487464.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
campestris pv. vasculorum NCPPB 702]
gi|289669028|ref|ZP_06490103.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
campestris pv. musacearum NCPPB 4381]
Length = 131
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 28/42 (66%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGLT 95
RPLSPHL +Y+ QI V SI +R TG+ L+ AL +A LT
Sbjct: 6 RPLSPHLQVYRWQIQMVTSILNRATGIVLSVGALVIAAALLT 47
>gi|406608082|emb|CCH40516.1| succinate dehydrogenase (ubiquinone) cytochrome b subunit precursor
[Wickerhamomyces ciferrii]
Length = 174
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 16 SSHLRLLPHIRTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITH 75
S+ L + I+ + + T +E + +R RP SPHLTIY+ Q+T +S H
Sbjct: 14 SNKFLTLKSQQIISKRFINQVTTTHEREQEILTQQRKNRPSSPHLTIYQPQLTWYVSSLH 73
Query: 76 RGTGVALT--------AYALG-LAGVGLTTDINSVVPTY 105
R TGV L AYA G L +G+ D NS+ +
Sbjct: 74 RVTGVLLAGAFYGVTVAYAAGDLFNLGI--DSNSIASYF 110
>gi|378786325|dbj|BAL63254.1| succinate:cytochrome c oxidoreductase subunit 3 (mitochondrion)
[Pyropia katadae]
Length = 129
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+ RP+SPHLTIY QI+S SI HR +GV +
Sbjct: 2 HNINRPISPHLTIYNSQISSTFSIWHRISGVVM 34
>gi|335424930|ref|ZP_08553923.1| succinate dehydrogenase subunit C [Salinisphaera shabanensis
E1L3A]
gi|334887061|gb|EGM25400.1| succinate dehydrogenase subunit C [Salinisphaera shabanensis
E1L3A]
Length = 128
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 49 NERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
+++ RPLSPH+ IY+ QI + SI HR +G+ L+
Sbjct: 2 SQQANRPLSPHIQIYRWQIAMLTSIAHRASGIVLS 36
>gi|348677185|gb|EGZ17002.1| hypothetical protein PHYSODRAFT_285862 [Phytophthora sojae]
Length = 168
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGL 94
S E ++ LGRP+SPH+ IY +T++ SI +R + V ++ +G + +G
Sbjct: 24 STENYSATQAALGRPISPHVEIYAFPVTAISSIANRFSAVGMSCAFVGGSALGF 77
>gi|296414660|ref|XP_002837016.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295632864|emb|CAZ81207.1| unnamed protein product [Tuber melanosporum]
Length = 182
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 20 RLLPHIRTITIKPVAAPTGVPSKEGHAVRN-ERLGRPLSPHLTIYKLQITSVLSITHRGT 78
R P T + A+ + + + + ++ N +R RP+SPHLTIY+ QITS++S +R T
Sbjct: 25 RAYPVASTTRSRYTASTSKLSNDDAQSILNAQRKLRPISPHLTIYQPQITSLMSGANRIT 84
Query: 79 GVALTAYALGLA 90
G L+ A A
Sbjct: 85 GAILSTSAYAFA 96
>gi|11465650|ref|NP_049321.1| succinate:cytochrome c oxidoreductase subunit 3 [Porphyra
purpurea]
gi|1705530|sp|P80478.1|C560_PORPU RecName: Full=Succinate dehydrogenase cytochrome b560 subunit;
AltName: Full=Succinate dehydrogenase, subunit III
gi|4106957|gb|AAD03124.1| succinate:cytochrome c oxidoreductase subunit 3 [Porphyra
purpurea]
Length = 125
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 24/32 (75%)
Query: 51 RLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+ RP+SPHLTIY Q +S+ SI HR +GVA+
Sbjct: 3 NINRPISPHLTIYNTQKSSLFSIWHRISGVAM 34
>gi|144898837|emb|CAM75701.1| succinate dehydrogenase cytochrome b556 subunit [Magnetospirillum
gryphiswaldense MSR-1]
Length = 138
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 4/44 (9%)
Query: 39 VPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
V + + RN RPLSPHL +Y+L + +++SITHR TGV L
Sbjct: 7 VSGAQSMSTRN----RPLSPHLDVYRLPLLAIMSITHRITGVGL 46
>gi|209967178|ref|YP_002300093.1| succinate dehydrogenase, cytochrome b556 [Rhodospirillum centenum
SW]
gi|209960644|gb|ACJ01281.1| succinate dehydrogenase, cytochrome b556, putative
[Rhodospirillum centenum SW]
Length = 138
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLA 90
RPLSPHL +Y+L + ++ SITHR TGV L A L LA
Sbjct: 16 RPLSPHLQVYRLPLPAIASITHRVTGVGLAAGTLLLA 52
>gi|387914066|gb|AFK10642.1| succinate dehydrogenase complex subunit C isoform 1 precursor
[Callorhinchus milii]
Length = 169
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 24/35 (68%)
Query: 48 RNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+N +L RPLSPHLTIY I +SI+HR TG L
Sbjct: 44 KNIQLNRPLSPHLTIYGWSIPMAMSISHRMTGAGL 78
>gi|308072487|dbj|BAJ22105.1| succinate dehydrogenase cytochrome subunit 3 [Cycas taitungensis]
Length = 130
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 24/36 (66%)
Query: 52 LGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYAL 87
+ RPLSPHLTIYK Q+TS SI HR +G L L
Sbjct: 3 INRPLSPHLTIYKPQLTSTFSILHRISGAFLATMVL 38
>gi|402848969|ref|ZP_10897215.1| Succinate dehydrogenase cytochrome b-556 subunit [Rhodovulum sp.
PH10]
gi|402500845|gb|EJW12511.1| Succinate dehydrogenase cytochrome b-556 subunit [Rhodovulum sp.
PH10]
Length = 136
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 26/39 (66%)
Query: 46 AVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
A R R+ RPLSPHL +Y+L T ++S HR TGV L A
Sbjct: 2 AERPARVARPLSPHLQVYRLTFTFLMSGFHRVTGVVLYA 40
>gi|2864622|emb|CAA16969.1| putative protein [Arabidopsis thaliana]
gi|7270125|emb|CAB79939.1| putative protein [Arabidopsis thaliana]
Length = 1086
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVPTY 105
RPLSPHL++Y+ Q+ S+LSI +R +GV LT + AG L + + TY
Sbjct: 998 RPLSPHLSVYQPQMNSMLSIFNRISGVYLT--GVTFAGYLLYLKMGMICLTY 1047
>gi|186920110|ref|YP_001874764.1| succinate:cytochrome c oxidoreductase subunit 4 [Hemiselmis
andersenii]
gi|186461056|gb|ACC78218.1| succinate:cytochrome c oxidoreductase subunit 4 [Hemiselmis
andersenii]
Length = 142
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 28/43 (65%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGV 92
E RPLSPHL +YK Q+TS +SI HR +G L+ + LA V
Sbjct: 17 EETNRPLSPHLYLYKAQLTSFVSIFHRISGSILSLSFIVLAFV 59
>gi|38638302|ref|NP_943707.1| succinate:cytochrome c oxidoreductase subunit 3 [Chara vulgaris]
gi|32966616|gb|AAP92199.1| succinate:cytochrome c oxidoreductase subunit 3 [Chara vulgaris]
Length = 131
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 23/32 (71%)
Query: 51 RLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
++ RPLSPH+TIYK Q+TS SI HR G L
Sbjct: 2 KINRPLSPHITIYKPQLTSTFSIFHRICGAFL 33
>gi|68466667|ref|XP_722529.1| hypothetical protein CaO19.1480 [Candida albicans SC5314]
gi|68466950|ref|XP_722390.1| hypothetical protein CaO19.9055 [Candida albicans SC5314]
gi|46444361|gb|EAL03636.1| hypothetical protein CaO19.9055 [Candida albicans SC5314]
gi|46444509|gb|EAL03783.1| hypothetical protein CaO19.1480 [Candida albicans SC5314]
gi|238881974|gb|EEQ45612.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 176
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA--YALGLAGVGLTTDI 98
++E + +R RP SPHL IY+ Q+T ++S HR TGVA+ YAL G T+ +
Sbjct: 40 NQEQEILVAQRKNRPTSPHLQIYEPQLTWIMSSFHRITGVAMAGAFYAL-TCGFAATSIL 98
Query: 99 N 99
N
Sbjct: 99 N 99
>gi|39933296|ref|NP_945572.1| succinate dehydrogenase cytochrome b subunit [Rhodopseudomonas
palustris CGA009]
gi|192288649|ref|YP_001989254.1| succinate dehydrogenase, cytochrome b556 subunit
[Rhodopseudomonas palustris TIE-1]
gi|39652921|emb|CAE25663.1| succinate dehydrogenase membrane anchor/cytochrome b subunit
[Rhodopseudomonas palustris CGA009]
gi|192282398|gb|ACE98778.1| succinate dehydrogenase, cytochrome b556 subunit
[Rhodopseudomonas palustris TIE-1]
Length = 132
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 49 NERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
R+ RPLSPH+ Y+ +T +SI HR TG+AL
Sbjct: 2 TARIERPLSPHMQAYRWSLTMTMSIVHRATGIAL 35
>gi|385099757|ref|YP_006234365.1| sdh3 gene product (mitochondrion) [Huperzia squarrosa]
gi|359741363|gb|AEV55711.1| succinate dehydrogenase subunit 3 (mitochondrion) [Huperzia
squarrosa]
Length = 137
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Query: 51 RLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA---YALGLAGVG 93
++ RPLSPHLTIYK Q+TS I HR +G L +++ G+G
Sbjct: 2 KINRPLSPHLTIYKPQLTSTFPIFHRISGAFLATMVLFSILFFGIG 47
>gi|316931809|ref|YP_004106791.1| succinate dehydrogenase, cytochrome b556 subunit
[Rhodopseudomonas palustris DX-1]
gi|315599523|gb|ADU42058.1| succinate dehydrogenase, cytochrome b556 subunit
[Rhodopseudomonas palustris DX-1]
Length = 132
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 51 RLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLA 90
R+ RPLSPH+ Y+ +T +SI HR TG+AL + L LA
Sbjct: 4 RIERPLSPHMQAYRWSLTMTMSIVHRATGIALYSGTLLLA 43
>gi|385153437|ref|YP_006073043.1| sdh3 gene product (mitochondrion) [Nitella hyalina]
gi|335354168|gb|AEH42855.1| succinate:cytochrome c oxidoreductase subunit 3 (mitochondrion)
[Nitella hyalina]
Length = 131
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 22/32 (68%)
Query: 51 RLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
++ RPLSPH+TIYK Q TS SI HR G L
Sbjct: 2 KINRPLSPHITIYKPQFTSTFSIFHRICGAFL 33
>gi|344228906|gb|EGV60792.1| cytochrome b560 subunit of succinate dehydrogenase [Candida tenuis
ATCC 10573]
Length = 172
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 13/75 (17%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAG--------- 91
+E + +R RP SPHL IY+ Q+T VLS HR TGV + A G G
Sbjct: 37 DEEQAILVQQRKNRPGSPHLEIYQPQLTWVLSSFHRITGVLM---AFGFYGLTCGYAASS 93
Query: 92 -VGLTTDINSVVPTY 105
+G D+NS++ +
Sbjct: 94 VLGYPLDVNSLIAAF 108
>gi|21231576|ref|NP_637493.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|66768302|ref|YP_243064.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
campestris pv. campestris str. 8004]
gi|188991441|ref|YP_001903451.1| succinate dehydrogenase (ubiquinone) cytochrome b556 subunit
[Xanthomonas campestris pv. campestris str. B100]
gi|21113263|gb|AAM41417.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|66573634|gb|AAY49044.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
campestris pv. campestris str. 8004]
gi|167733201|emb|CAP51399.1| succinate dehydrogenase (ubiquinone) cytochrome b556 subunit
[Xanthomonas campestris pv. campestris]
Length = 131
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 28/42 (66%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGLT 95
RPLSPHL +Y+ QI V SI +R TG+ L+ AL +A LT
Sbjct: 6 RPLSPHLQVYRWQIQMVTSILNRATGIVLSIGALVIAAALLT 47
>gi|29420823|dbj|BAC66633.1| succinate dehydrogenase cytochrome b560 subunit [Coprinopsis
cinerea]
Length = 179
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 27 TITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYA 86
+IT + V + P++ + +RL RP SPH TIY+ Q+T + SI +R TG L+
Sbjct: 32 SITRRFVQTESLTPAENLQLLNKQRLKRPSSPHFTIYQPQLTWLGSIANRVTGAGLSVLL 91
Query: 87 LGLA 90
G +
Sbjct: 92 YGFS 95
>gi|371572243|gb|AEX37503.1| SdhC (mitochondrion) [Gracilariopsis lemaneiformis]
Length = 123
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 53 GRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
RPLSPH+TIYK Q +S+ SI HR +G+ LT
Sbjct: 3 NRPLSPHITIYKPQASSLFSIWHRISGLFLT 33
>gi|299750219|ref|XP_001836610.2| succinate dehydrogenase cytochrome b560 subunit [Coprinopsis
cinerea okayama7#130]
gi|298408800|gb|EAU85181.2| succinate dehydrogenase cytochrome b560 subunit [Coprinopsis
cinerea okayama7#130]
Length = 178
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 27 TITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYA 86
+IT + V + P++ + +RL RP SPH TIY+ Q+T + SI +R TG L+
Sbjct: 31 SITRRFVQTESLTPAENLQLLNKQRLKRPSSPHFTIYQPQLTWLGSIANRVTGAGLSVLL 90
Query: 87 LGLA 90
G +
Sbjct: 91 YGFS 94
>gi|448512691|ref|XP_003866792.1| succinate dehydrogenase [Candida orthopsilosis Co 90-125]
gi|380351130|emb|CCG21353.1| succinate dehydrogenase [Candida orthopsilosis Co 90-125]
Length = 190
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA--YAL 87
++E + +R RP+SPHL IY+ Q+T +LS HR TGVA+ YAL
Sbjct: 54 NEEQEVLVAQRKNRPVSPHLEIYQPQLTWLLSGLHRITGVAMAGAFYAL 102
>gi|15837672|ref|NP_298360.1| succinate dehydrogenase, membrane anchor subunit [Xylella
fastidiosa 9a5c]
gi|9106017|gb|AAF83880.1|AE003943_11 succinate dehydrogenase, membrane anchor subunit [Xylella
fastidiosa 9a5c]
Length = 142
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALT 83
RPLSPHL +Y+ Q+ V SI HR TGV L+
Sbjct: 17 RPLSPHLQVYRWQMQMVTSILHRATGVFLS 46
>gi|395326746|gb|EJF59152.1| succinate dehydrogenase cytochrome b560 subunit [Dichomitus
squalens LYAD-421 SS1]
Length = 178
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 14/82 (17%)
Query: 9 TLCNPIASSHLRLLPHIRTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQIT 68
TLCN +A ++T ++ P AA + +RL RP SPH TIY+ Q+T
Sbjct: 28 TLCNIVAKRS------VQTESLPPSAAQ--------EILNKQRLRRPSSPHFTIYQPQLT 73
Query: 69 SVLSITHRGTGVALTAYALGLA 90
+ SI +R TG L+ G A
Sbjct: 74 WLGSIANRVTGAGLSVLLYGYA 95
>gi|367003635|ref|XP_003686551.1| hypothetical protein TPHA_0G02790 [Tetrapisispora phaffii CBS
4417]
gi|357524852|emb|CCE64117.1| hypothetical protein TPHA_0G02790 [Tetrapisispora phaffii CBS
4417]
Length = 184
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 10 LCNPIASSHL---RLLPHIRTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQ 66
L N AS L R + + R +I A E + +R RP+SPHLTIY+ Q
Sbjct: 15 LKNTAASKSLFLNRSIVNKRLFSISKSARNKITTQAEDTLLSKQRGNRPISPHLTIYQPQ 74
Query: 67 ITSVLSITHRGTGVALTA 84
+T LS HR T V L A
Sbjct: 75 LTWYLSSLHRLTAVFLGA 92
>gi|344206996|ref|YP_004792137.1| succinate dehydrogenase, cytochrome b556 subunit
[Stenotrophomonas maltophilia JV3]
gi|343778358|gb|AEM50911.1| succinate dehydrogenase, cytochrome b556 subunit
[Stenotrophomonas maltophilia JV3]
Length = 130
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLA 90
RPLSPHL +Y+ QI SI HR TG+ L+ AL +A
Sbjct: 6 RPLSPHLQVYRWQIQMATSILHRATGIFLSVGALIIA 42
>gi|330804877|ref|XP_003290416.1| hypothetical protein DICPUDRAFT_92482 [Dictyostelium purpureum]
gi|325079467|gb|EGC33066.1| hypothetical protein DICPUDRAFT_92482 [Dictyostelium purpureum]
Length = 116
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGLT 95
+P SPHLTIY+L + + +SI HR TGV+L LGL GV T
Sbjct: 66 KPTSPHLTIYRLPLPANISIMHRATGVSL---GLGLFGVCAT 104
>gi|182680904|ref|YP_001829064.1| succinate dehydrogenase, cytochrome b556 subunit [Xylella
fastidiosa M23]
gi|417558381|ref|ZP_12209360.1| Succinate dehydrogenase/fumarate reductase cytochrome b subunit
[Xylella fastidiosa EB92.1]
gi|182631014|gb|ACB91790.1| succinate dehydrogenase, cytochrome b556 subunit [Xylella
fastidiosa M23]
gi|338178998|gb|EGO81965.1| Succinate dehydrogenase/fumarate reductase cytochrome b subunit
[Xylella fastidiosa EB92.1]
Length = 131
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALT 83
RPLSPHL +Y+ Q+ V SI HR TGV L+
Sbjct: 6 RPLSPHLQVYRWQMQMVTSILHRATGVFLS 35
>gi|443897587|dbj|GAC74927.1| succinate dehydrogenase, cytochrome b subunit [Pseudozyma
antarctica T-34]
Length = 194
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 22 LPHIRTITIKPVAAPTGVPSKEGHA--VRNERLGRPLSPHLTIYKLQITSVLSITHRGTG 79
LP + +APT S++ + + +R RP SPH TIY+ QIT LSI +R TG
Sbjct: 36 LPRFSRMASTSTSAPTTKLSQQQNLDLLNEQRAKRPSSPHFTIYQPQITWYLSIINRITG 95
Query: 80 VALT 83
L+
Sbjct: 96 TGLS 99
>gi|427427346|ref|ZP_18917390.1| Succinate dehydrogenase cytochrome b-556 subunit [Caenispirillum
salinarum AK4]
gi|425883272|gb|EKV31948.1| Succinate dehydrogenase cytochrome b-556 subunit [Caenispirillum
salinarum AK4]
Length = 141
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 8/58 (13%)
Query: 42 KEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT------AYALGLAGVG 93
+E A++++ RPLSPHL +YKL I LSI HR TGV ++ Y +G A G
Sbjct: 11 EEADAMKSDT--RPLSPHLQVYKLPIEGKLSILHRITGVGISIGMLLLTYWVGAAAYG 66
>gi|28198267|ref|NP_778581.1| succinate dehydrogenase membrane anchor subunit [Xylella
fastidiosa Temecula1]
gi|28056337|gb|AAO28230.1| succinate dehydrogenase membrane anchor subunit [Xylella
fastidiosa Temecula1]
Length = 142
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALT 83
RPLSPHL +Y+ Q+ V SI HR TGV L+
Sbjct: 17 RPLSPHLQVYRWQMQMVTSILHRATGVFLS 46
>gi|354546660|emb|CCE43392.1| hypothetical protein CPAR2_210360 [Candida parapsilosis]
Length = 188
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA--YAL 87
+E + +R RP+SPHL IY+ Q+T +LS HR TGVA+ YAL
Sbjct: 52 DEEQDVLVAQRKNRPVSPHLDIYQPQLTWLLSGLHRITGVAMAGAFYAL 100
>gi|403215992|emb|CCK70490.1| hypothetical protein KNAG_0E02290 [Kazachstania naganishii CBS
8797]
Length = 175
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 26 RTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
R +++P++ + K+ + ++R RP+SPHLTIY+ +I+ LS HR TG+ L
Sbjct: 22 RMFSLRPLSM---IGKKDTSILESQRAKRPISPHLTIYEPEISWYLSSLHRITGIFL 75
>gi|378786314|dbj|BAL63247.1| succinate:cytochrome c oxidoreductase subunit 3, partial
(mitochondrion) [Pyropia seriata]
Length = 128
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
+ L RP+SPHLT+Y Q +S+ SI HR +GV + +
Sbjct: 2 QNLNRPISPHLTVYNPQKSSIFSIWHRISGVLMFS 36
>gi|405117709|gb|AFR92484.1| succinate dehydrogenase [Cryptococcus neoformans var. grubii H99]
Length = 177
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 21 LLPHIRTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGV 80
+L R + +PV A + + ++R RP SPH TIY+ Q+T LSI HR TGV
Sbjct: 27 MLAQRRLASTEPVTAAESIT-----LLNSQRQHRPTSPHATIYQPQLTWYLSILHRVTGV 81
Query: 81 AL 82
A
Sbjct: 82 AF 83
>gi|342872126|gb|EGU74523.1| hypothetical protein FOXB_14968 [Fusarium oxysporum Fo5176]
Length = 187
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 37 TGVPSKEGHAVR-NERLGRPLSPHLTIYKLQITSV-LSITHRGTGVALTAYALGLA 90
T V ++GH + N+RL RP+SPHL IYK++ T S +R TG L+A G +
Sbjct: 45 TKVSQQDGHQILVNQRLNRPVSPHLAIYKIEQTWFGSSAWNRITGCTLSATMYGFS 100
>gi|386800425|ref|YP_006280892.1| sdh3 gene product (mitochondrion) [Pyropia yezoensis]
gi|378786302|dbj|BAL63239.1| succinate: cytochrome c oxidoreductase subunit 3 (mitochondrion)
[Pyropia yezoensis]
gi|384034984|gb|AFH57695.1| succinate:cytochrome c oxidoreductase subunit 3 (mitochondrion)
[Pyropia yezoensis]
Length = 129
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALG 88
+ + RP+SPHLTIY Q +S+ SI HR +GV + +G
Sbjct: 2 QNINRPISPHLTIYNPQRSSIFSIWHRISGVIMFVLIVG 40
>gi|254510339|ref|ZP_05122406.1| succinate dehydrogenase, cytochrome b556 subunit
[Rhodobacteraceae bacterium KLH11]
gi|221534050|gb|EEE37038.1| succinate dehydrogenase, cytochrome b556 subunit
[Rhodobacteraceae bacterium KLH11]
Length = 184
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 24 HIRTITIKPVAAPTGVPSKEGHAVRN-ERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
H++ +T + V +++G + + R RPLSPHL+IY+ Q+TSV SI R TG A+
Sbjct: 34 HLQHVTASQKPLKSSVANRKGANMADVNRGNRPLSPHLSIYRPQLTSVTSILTRITGNAM 93
Query: 83 TAYAL 87
AL
Sbjct: 94 LLAAL 98
>gi|29420825|dbj|BAC66634.1| succinate dehydrogenase cytochrome b560 subunit [Coprinopsis
cinerea]
Length = 179
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 27 TITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYA 86
+IT + V + P++ + +RL RP SPH TIY+ Q+T + SI R TG L+
Sbjct: 32 SITRRFVQTESLTPAENLQLLNKQRLKRPSSPHFTIYQPQLTWLGSIAKRVTGAGLSVLL 91
Query: 87 LGLA 90
G +
Sbjct: 92 YGFS 95
>gi|448122665|ref|XP_004204502.1| Piso0_000353 [Millerozyma farinosa CBS 7064]
gi|448124956|ref|XP_004205060.1| Piso0_000353 [Millerozyma farinosa CBS 7064]
gi|358249693|emb|CCE72759.1| Piso0_000353 [Millerozyma farinosa CBS 7064]
gi|358350041|emb|CCE73320.1| Piso0_000353 [Millerozyma farinosa CBS 7064]
Length = 172
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGLTTDINS 100
+E + +R RP SPHLTIY+ ++T +LS HR TGV + A G G+ +T S
Sbjct: 37 DQEQDILVAQRKNRPTSPHLTIYQPELTWLLSGLHRITGVFM---AFGFYGITVTYAATS 93
Query: 101 VV 102
++
Sbjct: 94 LL 95
>gi|209954769|dbj|BAG80575.1| succinate dehydrogenase C subunit [Aspergillus oryzae]
gi|209954771|dbj|BAG80576.1| succinate dehydrogenase C subunit [Aspergillus oryzae]
Length = 188
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 34 AAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
AA T S + +RL RP+SPHL+IY+ QIT + S HR G AL+
Sbjct: 46 AATTSNTSDPTKILAQQRLNRPVSPHLSIYRPQITWIGSSFHRIIGFALS 95
>gi|425773767|gb|EKV12100.1| Succinate dehydrogenase cytochrome b560 subunit [Penicillium
digitatum Pd1]
gi|425775979|gb|EKV14218.1| Succinate dehydrogenase cytochrome b560 subunit [Penicillium
digitatum PHI26]
Length = 188
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 49 NERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
+RL RP++PHL+IYK QI + S HR TGVAL+
Sbjct: 61 KQRLQRPVAPHLSIYKPQIGWIGSSLHRITGVALS 95
>gi|452841759|gb|EME43696.1| hypothetical protein DOTSEDRAFT_72898 [Dothistroma septosporum
NZE10]
Length = 186
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 27/42 (64%), Gaps = 6/42 (14%)
Query: 43 EGHAVRNE-----RLGRPLSPHLTIYKLQITSVLSITHRGTG 79
E H VRNE RL RP++PHL IYK QIT LS +R TG
Sbjct: 49 ENH-VRNEILAKQRLNRPVAPHLAIYKPQITWYLSALNRITG 89
>gi|337265580|ref|YP_004609635.1| succinate dehydrogenase, cytochrome b556 subunit [Mesorhizobium
opportunistum WSM2075]
gi|336025890|gb|AEH85541.1| succinate dehydrogenase, cytochrome b556 subunit [Mesorhizobium
opportunistum WSM2075]
Length = 139
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 24/34 (70%)
Query: 49 NERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
N R RPLSPHLTIY+ IT +SI HR TG AL
Sbjct: 10 NARRERPLSPHLTIYRPPITMTMSIIHRITGGAL 43
>gi|242788126|ref|XP_002481157.1| succinate dehydrogenase, putative [Talaromyces stipitatus ATCC
10500]
gi|218721304|gb|EED20723.1| succinate dehydrogenase, putative [Talaromyces stipitatus ATCC
10500]
Length = 194
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 47 VRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
+ +RL RP+SPH+TIYK Q S+ SI R +G+ L
Sbjct: 60 LEQQRLRRPVSPHMTIYKWQYQSLTSILQRFSGIFLAG 97
>gi|367008482|ref|XP_003678741.1| hypothetical protein TDEL_0A01980 [Torulaspora delbrueckii]
gi|359746398|emb|CCE89530.1| hypothetical protein TDEL_0A01980 [Torulaspora delbrueckii]
Length = 177
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 37/66 (56%), Gaps = 9/66 (13%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA------YALG---LAG 91
KE + +R RP+SPHLTIY+ Q+T LS HR TGV L + A G L G
Sbjct: 41 EKEHEILVAQRGNRPVSPHLTIYQPQLTWYLSSLHRITGVILGSGFFAVTIAFGISTLFG 100
Query: 92 VGLTTD 97
+GL T+
Sbjct: 101 LGLNTE 106
>gi|418518773|ref|ZP_13084908.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
axonopodis pv. malvacearum str. GSPB1386]
gi|418523225|ref|ZP_13089247.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
axonopodis pv. malvacearum str. GSPB2388]
gi|410700187|gb|EKQ58755.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
axonopodis pv. malvacearum str. GSPB2388]
gi|410702467|gb|EKQ60972.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
axonopodis pv. malvacearum str. GSPB1386]
Length = 131
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALT 83
RPLSPHL +Y+ QI V SI +R TG+ LT
Sbjct: 6 RPLSPHLQVYRWQIQMVTSILNRATGIVLT 35
>gi|378786349|dbj|BAL63270.1| succinate:cytochrome c oxidoreductase subunit 3 (mitochondrion)
[Pyropia vietnamensis]
Length = 129
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+ RPLSPHLTIY Q +S+ SI HR +GV +
Sbjct: 2 NNINRPLSPHLTIYNPQKSSIFSIWHRISGVFM 34
>gi|210076240|ref|XP_504562.2| YALI0E29667p [Yarrowia lipolytica]
gi|199426970|emb|CAG80166.2| YALI0E29667p [Yarrowia lipolytica CLIB122]
Length = 171
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 37 TGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVA--------LTAYALG 88
T P++ + +R RP SPHL IY+ Q+T LS HR TGVA L AYA G
Sbjct: 32 TTTPAEALDILNKQRALRPTSPHLDIYQPQLTWYLSGLHRVTGVALGGALYALLCAYAAG 91
Query: 89 LAGVGLTTDINSVVPTY 105
A +G+ D ++ T+
Sbjct: 92 PA-LGIHIDSTTLAHTF 107
>gi|21242814|ref|NP_642396.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
axonopodis pv. citri str. 306]
gi|21108300|gb|AAM36932.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
axonopodis pv. citri str. 306]
gi|50981400|gb|AAT91478.1| succinate dehydrogenase subunit C [Xanthomonas citri]
Length = 131
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALT 83
RPLSPHL +Y+ QI V SI +R TG+ LT
Sbjct: 6 RPLSPHLQVYRWQIQMVTSILNRATGIVLT 35
>gi|401885960|gb|EJT50038.1| hypothetical protein A1Q1_00748 [Trichosporon asahii var. asahii
CBS 2479]
Length = 179
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 39 VPSKEGHAVRNE-RLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+ K+ + + N+ R+ RP SPHL IY+ Q+T LS HR TGVAL
Sbjct: 41 ISEKQQYELLNQQRMNRPNSPHLEIYQPQLTWYLSGLHRITGVAL 85
>gi|14861484|gb|AAK73692.1|AF362739_1 succinate dehydrogenase subunit 3 [Gossypium hirsutum]
Length = 201
Score = 42.0 bits (97), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 25/30 (83%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALT 83
RPLSPHL IYK Q+++ LSIT+R +GV LT
Sbjct: 107 RPLSPHLPIYKPQLSATLSITNRISGVFLT 136
>gi|91974961|ref|YP_567620.1| succinate dehydrogenase, cytochrome b subunit [Rhodopseudomonas
palustris BisB5]
gi|91681417|gb|ABE37719.1| succinate dehydrogenase subunit C [Rhodopseudomonas palustris
BisB5]
Length = 129
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPH+ Y+ +T LSI HR TG+AL
Sbjct: 4 RPLSPHMQAYRWSLTMALSIVHRATGIAL 32
>gi|347758674|ref|YP_004866236.1| succinate dehydrogenase, cytochrome b556 subunit [Micavibrio
aeruginosavorus ARL-13]
gi|347591192|gb|AEP10234.1| succinate dehydrogenase, cytochrome b556 subunit [Micavibrio
aeruginosavorus ARL-13]
Length = 145
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 23/29 (79%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPH+ +Y+ +IT LSI HR +G+AL
Sbjct: 11 RPLSPHIQVYRWEITMALSILHRMSGMAL 39
>gi|323332076|gb|EGA73487.1| YMR118C-like protein [Saccharomyces cerevisiae AWRI796]
Length = 228
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGLTTDINS 100
+KE + ++R RP+SPHLT+Y+ +++ LS HR +GV L ALG +T + +
Sbjct: 92 NKEEELLVSQRKKRPISPHLTVYEPEMSWYLSSLHRISGVLL---ALGFYAFTITLGVTT 148
Query: 101 VV 102
++
Sbjct: 149 IM 150
>gi|71730827|gb|EAO32899.1| Succinate dehydrogenase, cytochrome b subunit [Xylella fastidiosa
Ann-1]
Length = 142
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALT 83
RPLSPHL IY+ Q+ + SI HR TGV L+
Sbjct: 17 RPLSPHLQIYRWQMQMLTSILHRATGVFLS 46
>gi|46132950|ref|XP_389188.1| hypothetical protein FG09012.1 [Gibberella zeae PH-1]
Length = 187
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 39 VPSKEGHAVR-NERLGRPLSPHLTIYKLQITSV-LSITHRGTGVALTAYALGLA 90
V ++GH + N+RL RP+SPHL IYKL+ T S +R TG L+A G +
Sbjct: 47 VSQEDGHQILVNQRLNRPVSPHLAIYKLEQTWFGSSAWNRITGCTLSATLYGFS 100
>gi|304320539|ref|YP_003854182.1| succinate dehydrogenase cytochrome B-556 subunit [Parvularcula
bermudensis HTCC2503]
gi|303299441|gb|ADM09040.1| succinate dehydrogenase cytochrome B-556 subunit [Parvularcula
bermudensis HTCC2503]
Length = 142
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
RPLSPHL I++ +T SI HR TG+AL A
Sbjct: 19 RPLSPHLQIWRWSVTMATSILHRATGIALYA 49
>gi|315497255|ref|YP_004086059.1| succinate dehydrogenase, cytochrome b556 subunit [Asticcacaulis
excentricus CB 48]
gi|315415267|gb|ADU11908.1| succinate dehydrogenase, cytochrome b556 subunit [Asticcacaulis
excentricus CB 48]
Length = 143
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 21/33 (63%)
Query: 49 NERLGRPLSPHLTIYKLQITSVLSITHRGTGVA 81
E RPLSPHL ++K IT SI HR TG+A
Sbjct: 7 TEAAYRPLSPHLQVWKFHITMFTSILHRATGIA 39
>gi|156849173|ref|XP_001647467.1| hypothetical protein Kpol_1018p147 [Vanderwaltozyma polyspora DSM
70294]
gi|156118153|gb|EDO19609.1| hypothetical protein Kpol_1018p147 [Vanderwaltozyma polyspora DSM
70294]
Length = 170
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
S E + +R RP+SPHLTIY+ Q+T LS HR + +AL A
Sbjct: 36 SAESQLLTAQRGNRPISPHLTIYQPQLTWYLSSVHRVSCIALGA 79
>gi|119570485|gb|EAW50100.1| hCG2040215 [Homo sapiens]
Length = 132
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 37 TGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYA--LGLAGVGL 94
TG E +N L RP+SPH+TIY + ++I H TG AL A A G++ + L
Sbjct: 33 TGKQEMERFWNKNTGLNRPVSPHVTIYSWSLPMAMAICHHDTGTALRAGASLFGMSALLL 92
Query: 95 TTDINSVV 102
+ S +
Sbjct: 93 PGNFESYL 100
>gi|406697398|gb|EKD00659.1| hypothetical protein A1Q2_05054 [Trichosporon asahii var. asahii
CBS 8904]
Length = 152
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 39 VPSKEGHAVRNE-RLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+ K+ + + N+ R+ RP SPHL IY+ Q+T LS HR TGVAL
Sbjct: 41 ISEKQQYELLNQQRMNRPNSPHLEIYQPQLTWYLSGLHRITGVAL 85
>gi|378786331|dbj|BAL63258.1| succinate:cytochrome c oxidoreductase subunit 3 (mitochondrion)
[Pyropia ishigecola]
Length = 129
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALG 88
+ RP+SPHLTIY Q +S+ SI HR +GV + +G
Sbjct: 2 HNINRPISPHLTIYNSQRSSIFSIWHRISGVIMFVLIVG 40
>gi|58578853|ref|YP_197065.1| succinate dehydrogenase cytochrome B-556 subunit [Ehrlichia
ruminantium str. Welgevonden]
gi|58417479|emb|CAI26683.1| Succinate dehydrogenase cytochrome B-556 subunit [Ehrlichia
ruminantium str. Welgevonden]
Length = 143
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 18/25 (72%), Positives = 22/25 (88%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGT 78
RPLSPHL +YKL +++VLSITHR T
Sbjct: 16 RPLSPHLQVYKLPMSAVLSITHRFT 40
>gi|255724056|ref|XP_002546957.1| succinate dehydrogenase cytochrome B subunit, mitochondrial
precursor [Candida tropicalis MYA-3404]
gi|240134848|gb|EER34402.1| succinate dehydrogenase cytochrome B subunit, mitochondrial
precursor [Candida tropicalis MYA-3404]
Length = 186
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 43 EGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA--YAL 87
E + +R RP SPHL IY+ Q+T +LS HR TGVA+ YAL
Sbjct: 51 EQEILVAQRRNRPSSPHLQIYQPQLTWILSSFHRITGVAMAGAFYAL 97
>gi|256269648|gb|EEU04929.1| YMR118C-like protein [Saccharomyces cerevisiae JAY291]
Length = 196
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGLTTDINS 100
+KE + ++R RP+SPHLT+Y+ +++ LS HR +GV L ALG +T + +
Sbjct: 60 NKEEELLVSQRKKRPISPHLTVYEPEMSWYLSSLHRISGVLL---ALGFYAFTITLGVTT 116
Query: 101 VV 102
++
Sbjct: 117 IM 118
>gi|151946274|gb|EDN64505.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190408347|gb|EDV11612.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
gi|207342306|gb|EDZ70103.1| YMR118Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259148692|emb|CAY81937.1| EC1118_1M3_2916p [Saccharomyces cerevisiae EC1118]
gi|323303544|gb|EGA57336.1| YMR118C-like protein [Saccharomyces cerevisiae FostersB]
gi|323307750|gb|EGA61013.1| YMR118C-like protein [Saccharomyces cerevisiae FostersO]
gi|323336310|gb|EGA77581.1| YMR118C-like protein [Saccharomyces cerevisiae Vin13]
gi|323347196|gb|EGA81471.1| YMR118C-like protein [Saccharomyces cerevisiae Lalvin QA23]
gi|365763839|gb|EHN05365.1| YMR118C-like protein [Saccharomyces cerevisiae x Saccharomyces
kudriavzevii VIN7]
Length = 196
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGLTTDINS 100
+KE + ++R RP+SPHLT+Y+ +++ LS HR +GV L ALG +T + +
Sbjct: 60 NKEEELLVSQRKKRPISPHLTVYEPEMSWYLSSLHRISGVLL---ALGFYAFTITLGVTT 116
Query: 101 VV 102
++
Sbjct: 117 IM 118
>gi|409048397|gb|EKM57875.1| hypothetical protein PHACADRAFT_251770 [Phanerochaete carnosa
HHB-10118-sp]
Length = 177
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 40 PSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALG 88
PS + +RL RP SPH TIY+ Q+T + SI +R TG L+ G
Sbjct: 44 PSAAEKILNEQRLKRPSSPHFTIYQPQLTWLGSIANRVTGAGLSVLMYG 92
>gi|323353090|gb|EGA85390.1| YMR118C-like protein [Saccharomyces cerevisiae VL3]
Length = 196
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGLTTDINS 100
+KE + ++R RP+SPHLT+Y+ +++ LS HR +GV L ALG +T + +
Sbjct: 60 NKEEELLVSQRKKRPISPHLTVYEPEMSWYLSSLHRISGVLL---ALGFYAFTITLGVTT 116
Query: 101 VV 102
++
Sbjct: 117 IM 118
>gi|431806097|ref|YP_007232998.1| Succinate dehydrogenase cytochrome b-556 subunit [Liberibacter
crescens BT-1]
gi|430800072|gb|AGA64743.1| Succinate dehydrogenase cytochrome b-556 subunit [Liberibacter
crescens BT-1]
Length = 131
Score = 41.6 bits (96), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 53 GRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
GRPLSPHL +YKL T ++SI HR TG A+
Sbjct: 7 GRPLSPHLQVYKLIPTMLMSIMHRITGAAM 36
>gi|6323765|ref|NP_013836.1| protein SHH3 [Saccharomyces cerevisiae S288c]
gi|2493413|sp|Q04487.1|YM07_YEAST RecName: Full=Putative succinate dehydrogenase [ubiquinone]
cytochrome b subunit, mitochondrial; Flags: Precursor
gi|817878|emb|CAA89756.1| unknown [Saccharomyces cerevisiae]
gi|45269828|gb|AAS56294.1| YMR118C [Saccharomyces cerevisiae]
gi|285814120|tpg|DAA10015.1| TPA: protein SHH3 [Saccharomyces cerevisiae S288c]
gi|349580401|dbj|GAA25561.1| K7_Ymr118cp [Saccharomyces cerevisiae Kyokai no. 7]
gi|392297280|gb|EIW08380.1| hypothetical protein CENPK1137D_150 [Saccharomyces cerevisiae
CEN.PK113-7D]
Length = 196
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGLTTDINS 100
+KE + ++R RP+SPHLT+Y+ +++ LS HR +GV L ALG +T + +
Sbjct: 60 NKEEELLVSQRKKRPISPHLTVYEPEMSWYLSSLHRISGVLL---ALGFYAFTITLGVTT 116
Query: 101 VV 102
++
Sbjct: 117 IM 118
>gi|170108186|ref|XP_001885302.1| succinate dehydrogenase cytochrome b560 subunit [Laccaria bicolor
S238N-H82]
gi|164639778|gb|EDR04047.1| succinate dehydrogenase cytochrome b560 subunit [Laccaria bicolor
S238N-H82]
Length = 181
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 26 RTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAY 85
R++T + P+ S + +RL RP SPH TIY+ Q+T + SI +R TG L+
Sbjct: 36 RSVTTTTQSLPS---SAAAEILDKQRLRRPSSPHFTIYQPQLTWIASIANRVTGAGLSVL 92
Query: 86 ALGLA 90
G +
Sbjct: 93 LYGFS 97
>gi|395765502|ref|ZP_10446102.1| succinate dehydrogenase, cytochrome b556 subunit [Bartonella sp.
DB5-6]
gi|395411332|gb|EJF77855.1| succinate dehydrogenase, cytochrome b556 subunit [Bartonella sp.
DB5-6]
Length = 133
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 22/29 (75%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RP SPH+TIY+ IT +SI HR TGVAL
Sbjct: 10 RPRSPHVTIYRWTITMAMSIAHRITGVAL 38
>gi|163761421|ref|ZP_02168495.1| putative succinate dehydrogenase cytochrome b556 subunit [Hoeflea
phototrophica DFL-43]
gi|162281416|gb|EDQ31713.1| putative succinate dehydrogenase cytochrome b556 subunit [Hoeflea
phototrophica DFL-43]
Length = 163
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 29/44 (65%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
K+ ++ N RPLSPHL+IYK T V+SI HR TG+AL A
Sbjct: 27 EKDQVSMTNVTQNRPLSPHLSIYKQIPTMVMSILHRLTGMALYA 70
>gi|388581332|gb|EIM21641.1| cytochrome b560 subunit of succinate dehydrogenase, partial
[Wallemia sebi CBS 633.66]
Length = 142
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 7/63 (11%)
Query: 47 VRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT----AYALG---LAGVGLTTDIN 99
+ +R RP SPH TIY+ Q+T + SI HR TGV L+ A+A+G L VG D
Sbjct: 13 LNRQRNLRPSSPHFTIYQPQLTWLASIGHRVTGVGLSAGIYAFAIGYVTLPFVGAGFDSQ 72
Query: 100 SVV 102
S++
Sbjct: 73 SLI 75
>gi|395788955|ref|ZP_10468485.1| succinate dehydrogenase, cytochrome b556 subunit [Bartonella
taylorii 8TBB]
gi|395431089|gb|EJF97116.1| succinate dehydrogenase, cytochrome b556 subunit [Bartonella
taylorii 8TBB]
Length = 133
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 22/29 (75%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RP SPH+TIY+ IT +SI HR TGVAL
Sbjct: 10 RPRSPHVTIYRWTITMAMSIAHRITGVAL 38
>gi|452982384|gb|EME82143.1| hypothetical protein MYCFIDRAFT_72469 [Pseudocercospora fijiensis
CIRAD86]
Length = 184
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 33/53 (62%), Gaps = 8/53 (15%)
Query: 43 EGHAVRNE-----RLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA--YALG 88
E HA RNE RL RP++PHL+IY+ QIT LS +R TG ++ YA G
Sbjct: 47 ETHA-RNEILAKQRLNRPVAPHLSIYQPQITWYLSALNRITGCTVSGLFYAYG 98
>gi|158425367|ref|YP_001526659.1| succinate dehydrogenase cytochrome b-556 subunit [Azorhizobium
caulinodans ORS 571]
gi|158332256|dbj|BAF89741.1| succinate dehydrogenase cytochrome b-556 subunit [Azorhizobium
caulinodans ORS 571]
Length = 133
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 24/33 (72%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
R+ RPLSPHL IY+ T V+SI HR TG+AL
Sbjct: 6 SRIVRPLSPHLQIYRPLPTMVMSIVHRATGIAL 38
>gi|8954360|ref|NP_059349.1| succinate dehydrogenase cytochrome B560 subunit [Cyanidioschyzon
merolae]
gi|4115782|dbj|BAA36520.1| succinate dehydrogenase cytochrome B560 subunit [Cyanidioschyzon
merolae strain 10D]
Length = 137
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYAL 87
RP++PHLTIY Q SV SI HR +GV + +
Sbjct: 7 RPIAPHLTIYNAQWNSVFSIFHRISGVFIMVFIF 40
>gi|451941234|ref|YP_007461872.1| succinate dehydrogenase cytochrome b560 subunit [Bartonella
australis Aust/NH1]
gi|451900621|gb|AGF75084.1| succinate dehydrogenase cytochrome b560 subunit [Bartonella
australis Aust/NH1]
Length = 157
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 32/61 (52%), Gaps = 8/61 (13%)
Query: 53 GRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLA--------GVGLTTDINSVVPT 104
GRP SPH+ IY+ +T +SI HR TGVAL + LA GV IN + +
Sbjct: 33 GRPRSPHVGIYRWSVTMAMSIAHRITGVALYFGMIFLAIWVSSIACGVEAFRTINGIYGS 92
Query: 105 Y 105
Y
Sbjct: 93 Y 93
>gi|302675006|ref|XP_003027187.1| hypothetical protein SCHCODRAFT_86145 [Schizophyllum commune
H4-8]
gi|300100873|gb|EFI92284.1| hypothetical protein SCHCODRAFT_86145 [Schizophyllum commune
H4-8]
Length = 175
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 40 PSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLA 90
PS + +RL RP SPH+TIY+ Q+T SI +R TGV L+ G +
Sbjct: 42 PSATEGILNEQRLRRPNSPHMTIYQPQLTWYSSIANRITGVGLSVLLYGFS 92
>gi|400593517|gb|EJP61460.1| succinate dehydrogenase cytochrome b subunit [Beauveria bassiana
ARSEF 2860]
Length = 197
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 31 KPVAAP--TGVPS-KEGHAVRNERLGRPLSPHLTIYKLQITSV-LSITHRGTGVALTAYA 86
+P A+P T VP+ + A+RN+RL RP++PHL IYKL T + S R TG L+ A
Sbjct: 47 EPRASPRITRVPTGHQDAALRNQRLKRPIAPHLEIYKLDQTYLGTSAWMRITGCTLSGVA 106
>gi|380512015|ref|ZP_09855422.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas
sacchari NCPPB 4393]
Length = 130
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 24/34 (70%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYAL 87
RPLSPHL +Y+ QI V SI +R TG+ L+ AL
Sbjct: 6 RPLSPHLQVYRWQIQMVTSILNRATGIVLSIGAL 39
>gi|331215943|ref|XP_003320651.1| hypothetical protein PGTG_02673 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309299641|gb|EFP76232.1| hypothetical protein PGTG_02673 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 189
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%), Gaps = 4/46 (8%)
Query: 47 VRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT----AYALG 88
+ +R RP SPH TIY+ Q+T SI +R TG AL+ AYALG
Sbjct: 61 LNEQRKLRPSSPHFTIYQPQLTWYSSIANRVTGCALSAGFYAYALG 106
>gi|319786900|ref|YP_004146375.1| succinate dehydrogenase, cytochrome b556 subunit
[Pseudoxanthomonas suwonensis 11-1]
gi|317465412|gb|ADV27144.1| succinate dehydrogenase, cytochrome b556 subunit
[Pseudoxanthomonas suwonensis 11-1]
Length = 130
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 20/27 (74%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGV 80
RPLSPHL +Y+ Q+ V SI HR TG+
Sbjct: 6 RPLSPHLQVYRWQVQMVTSILHRATGI 32
>gi|297806993|ref|XP_002871380.1| succinate dehydrogenase 3-1 [Arabidopsis lyrata subsp. lyrata]
gi|297317217|gb|EFH47639.1| succinate dehydrogenase 3-1 [Arabidopsis lyrata subsp. lyrata]
Length = 213
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVPTY 105
RPLSPHLT+Y+ Q+ S+LSI +R +GV LT + AG L + + TY
Sbjct: 125 RPLSPHLTVYQPQMNSMLSIFNRISGVYLT--GVTFAGYLLYLKMGMICLTY 174
>gi|58616911|ref|YP_196110.1| succinate dehydrogenase cytochrome B-556 subunit [Ehrlichia
ruminantium str. Gardel]
gi|58416523|emb|CAI27636.1| Succinate dehydrogenase cytochrome B-556 subunit [Ehrlichia
ruminantium str. Gardel]
Length = 132
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 18/25 (72%), Positives = 21/25 (84%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGT 78
RPLSPHL +YKL + +VLSITHR T
Sbjct: 5 RPLSPHLQVYKLPMAAVLSITHRFT 29
>gi|389696108|ref|ZP_10183750.1| succinate dehydrogenase, cytochrome b556 subunit [Microvirga sp.
WSM3557]
gi|388584914|gb|EIM25209.1| succinate dehydrogenase, cytochrome b556 subunit [Microvirga sp.
WSM3557]
Length = 131
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IY+ T +S+ HR TG+AL
Sbjct: 9 RPLSPHLQIYRWSWTMAMSVAHRITGIAL 37
>gi|57238921|ref|YP_180057.1| succinate dehydrogenase cytochrome B-556 subunit [Ehrlichia
ruminantium str. Welgevonden]
gi|57161000|emb|CAH57906.1| putative succinate dehydrogenase cytochrome b-556 subunit
[Ehrlichia ruminantium str. Welgevonden]
Length = 132
Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 18/25 (72%), Positives = 21/25 (84%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGT 78
RPLSPHL +YKL + +VLSITHR T
Sbjct: 5 RPLSPHLQVYKLPMAAVLSITHRFT 29
>gi|392577285|gb|EIW70414.1| hypothetical protein TREMEDRAFT_43131 [Tremella mesenterica DSM
1558]
Length = 178
Score = 41.2 bits (95), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 21 LLPHIRTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGV 80
LL R + +PV P+ E + ++R RP SPHL IY+ Q+T + S +R TGV
Sbjct: 28 LLAQRRFASTQPV-----TPADEIAILNSQREKRPTSPHLAIYQPQLTWIASGFNRLTGV 82
Query: 81 ALTAYALG 88
AL+ G
Sbjct: 83 ALSGVLYG 90
>gi|114328744|ref|YP_745901.1| succinate dehydrogenase cytochrome b556 subunit [Granulibacter
bethesdensis CGDNIH1]
gi|114316918|gb|ABI62978.1| succinate dehydrogenase cytochrome b556 subunit [Granulibacter
bethesdensis CGDNIH1]
Length = 197
Score = 41.2 bits (95), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 21/28 (75%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVA 81
RPLSPHL +Y+ IT LSI HR TGVA
Sbjct: 75 RPLSPHLQVYRWPITMALSILHRVTGVA 102
>gi|378786334|dbj|BAL63260.1| succinate:cytochrome c oxidoreductase subunit 3 (mitochondrion)
[Pyropia kurogii]
Length = 129
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+ RPLSPHLTIY Q S+ SI HR +GV +
Sbjct: 2 RNINRPLSPHLTIYNPQKASIFSIWHRISGVIM 34
>gi|320034179|gb|EFW16124.1| succinate dehydrogenase [Coccidioides posadasii str. Silveira]
Length = 186
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 49 NERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
+RL RP+SPHLTIY+ QI+ LS +R TG L+
Sbjct: 59 QQRLNRPVSPHLTIYRPQISWYLSALNRITGSVLS 93
>gi|212535344|ref|XP_002147828.1| succinate dehydrogenase cytochrome b560 subunit [Talaromyces
marneffei ATCC 18224]
gi|210070227|gb|EEA24317.1| succinate dehydrogenase cytochrome b560 subunit [Talaromyces
marneffei ATCC 18224]
Length = 186
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 18/90 (20%)
Query: 10 LCNPIASSHLRLL--PHIRTITIKPVAAPTGVPSKEGHAVR----------------NER 51
+ +A LR L P T+++ A P + + +R +R
Sbjct: 2 ISQKVAQQSLRRLAAPSALTVSMAKFATPAAIATGRYMQMRSTSTTPTTTDPTKILAEQR 61
Query: 52 LGRPLSPHLTIYKLQITSVLSITHRGTGVA 81
L RP+SPHL+IY+ QIT S HR TG A
Sbjct: 62 LKRPVSPHLSIYRPQITWYASALHRITGSA 91
>gi|58258559|ref|XP_566692.1| succinate dehydrogenase (ubiquinone) [Cryptococcus neoformans var.
neoformans JEC21]
gi|134106659|ref|XP_778340.1| hypothetical protein CNBA3400 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50261043|gb|EAL23693.1| hypothetical protein CNBA3400 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57222829|gb|AAW40873.1| succinate dehydrogenase (ubiquinone), putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 221
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 31 KPVAAPTGVPSKEGHAVRN-ERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+ +A+ V + E A+ N +R RP SPHL IY+ Q+T LS HR TGVA
Sbjct: 75 RRLASTESVTAAESIALLNSQRQHRPTSPHLAIYQPQLTWYLSSLHRITGVAF 127
>gi|45198725|ref|NP_985754.1| AFR207Cp [Ashbya gossypii ATCC 10895]
gi|44984735|gb|AAS53578.1| AFR207Cp [Ashbya gossypii ATCC 10895]
gi|374108985|gb|AEY97891.1| FAFR207Cp [Ashbya gossypii FDAG1]
Length = 166
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 37/70 (52%), Gaps = 14/70 (20%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA--YA------------LGLAGVGLT 95
+R RP+SPHLTIY+ Q+T LS HR +GV L YA LGL L
Sbjct: 39 QRKNRPVSPHLTIYQPQLTWYLSSVHRISGVLLGGAFYAVTISFGVSALLGLGLNAENLA 98
Query: 96 TDINSVVPTY 105
T +S +PT+
Sbjct: 99 TWYHSHMPTW 108
>gi|315048699|ref|XP_003173724.1| succinate dehydrogenase cytochrome B subunit [Arthroderma gypseum
CBS 118893]
gi|311341691|gb|EFR00894.1| succinate dehydrogenase cytochrome B subunit [Arthroderma gypseum
CBS 118893]
Length = 221
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 25/35 (71%)
Query: 49 NERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
+RL RP+SPHLTIY+ QIT LS +R TG L+
Sbjct: 94 KQRLNRPVSPHLTIYQPQITWYLSSLNRITGAMLS 128
>gi|307942783|ref|ZP_07658128.1| succinate dehydrogenase, cytochrome b556 subunit [Roseibium sp.
TrichSKD4]
gi|307773579|gb|EFO32795.1| succinate dehydrogenase, cytochrome b556 subunit [Roseibium sp.
TrichSKD4]
Length = 132
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 24/34 (70%)
Query: 49 NERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+ R RPLSPHL IYK +T V+SI HR TG AL
Sbjct: 5 DSRGNRPLSPHLQIYKPILTMVMSILHRITGAAL 38
>gi|298293274|ref|YP_003695213.1| succinate dehydrogenase, cytochrome b556 subunit [Starkeya
novella DSM 506]
gi|296929785|gb|ADH90594.1| succinate dehydrogenase, cytochrome b556 subunit [Starkeya
novella DSM 506]
Length = 130
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 23/29 (79%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IY+ +T ++SI HR TGVAL
Sbjct: 7 RPLSPHLQIYRPMLTMMMSIVHRITGVAL 35
>gi|254470646|ref|ZP_05084049.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudovibrio
sp. JE062]
gi|211959788|gb|EEA94985.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudovibrio
sp. JE062]
Length = 132
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 49 NERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+ + RPLSPHL IYK +T V+SI HR TG AL
Sbjct: 5 DLKANRPLSPHLQIYKPIVTMVMSILHRITGAAL 38
>gi|378786337|dbj|BAL63262.1| succinate:cytochrome c oxidoreductase subunit 3 (mitochondrion)
[Porphyra moriensis]
Length = 129
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+ + RP+SPHLTIY Q +S+ SI HR +GV +
Sbjct: 2 QNINRPISPHLTIYNPQRSSIFSIWHRISGVVM 34
>gi|392865630|gb|EAS31432.2| succinate dehydrogenase, cytochrome b556 subunit [Coccidioides
immitis RS]
Length = 186
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 49 NERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
+RL RP+SPHLTIY+ QI+ LS +R TG L+
Sbjct: 59 QQRLNRPVSPHLTIYRPQISWYLSALNRITGSVLS 93
>gi|258571015|ref|XP_002544311.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237904581|gb|EEP78982.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 204
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 8 STLCNPIASSHLRLLPHIRTITIKPVAAPTGVPSKEG----HAVRNERLGRPLSPHLTIY 63
S C P L R +T + A T PS + + +RL RP++PHL+IY
Sbjct: 34 SNCCWPDQQPQPETL--TRKLTTRRPATSTSTPSADTTDPTQILAKQRLNRPVAPHLSIY 91
Query: 64 KLQITSVLSITHRGTGVALT 83
K QI+ LS +R TG ++
Sbjct: 92 KPQISWYLSALNRITGCTVS 111
>gi|378786340|dbj|BAL63264.1| succinate:cytochrome c oxidoreductase subunit 3 (mitochondrion)
[Pyropia tanegashimensis]
Length = 129
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT------AYALGLAGVGLTT 96
+ RPLSPHLTIY Q +S+ SI HR +GV + A+ L A TT
Sbjct: 2 SNVNRPLSPHLTIYNPQRSSIFSIWHRISGVIMFISVSSLAFLLNQAYFTYTT 54
>gi|148554233|ref|YP_001261815.1| succinate dehydrogenase subunit C [Sphingomonas wittichii RW1]
gi|148499423|gb|ABQ67677.1| succinate dehydrogenase subunit C [Sphingomonas wittichii RW1]
Length = 135
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 53 GRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGV 92
GRPLSPHLTI+K +SI HR TGV L A GLA V
Sbjct: 6 GRPLSPHLTIWKWGPHMAVSILHRATGVGLAIVA-GLAFV 44
>gi|378786305|dbj|BAL63241.1| succinate: cytochrome c oxidoreductase subunit 3 (mitochondrion)
[Porphyra kinositae]
Length = 129
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 52 LGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALG 88
+ RP+SPHLTIY Q +S+ SI HR +GV + +G
Sbjct: 4 INRPISPHLTIYNPQRSSIFSIWHRISGVIMFVLIVG 40
>gi|392594479|gb|EIW83803.1| succinate dehydrogenase cytochrome b560 subunit [Coniophora
puteana RWD-64-598 SS2]
Length = 179
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 36 PTGVPSKEGHAVRN-ERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA--YALGLA 90
P +P G + N +RL RP SPH TIY+ QIT + SI +R TG AL YA +A
Sbjct: 41 PQVLPPAAGVEILNRQRLRRPSSPHFTIYQPQITWLGSIANRVTGGALAGLLYAYSIA 98
>gi|303319777|ref|XP_003069888.1| Succinate dehydrogenase cytochrome b subunit family protein
[Coccidioides posadasii C735 delta SOWgp]
gi|240109574|gb|EER27743.1| Succinate dehydrogenase cytochrome b subunit family protein
[Coccidioides posadasii C735 delta SOWgp]
Length = 193
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 49 NERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
+RL RP+SPHLTIY+ QI+ LS +R TG L+
Sbjct: 66 QQRLNRPVSPHLTIYRPQISWYLSALNRITGSVLS 100
>gi|378786299|dbj|BAL63237.1| succinate: cytochrome c oxidoreductase subunit 3 (mitochondrion)
[Pyropia tenera]
Length = 127
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALG 88
+ RP+SPHLTIY Q +S+ SI HR +GV + +G
Sbjct: 2 HNINRPISPHLTIYNPQRSSIFSIWHRISGVIMFVLIVG 40
>gi|296445361|ref|ZP_06887319.1| succinate dehydrogenase, cytochrome b556 subunit [Methylosinus
trichosporium OB3b]
gi|296257122|gb|EFH04191.1| succinate dehydrogenase, cytochrome b556 subunit [Methylosinus
trichosporium OB3b]
Length = 136
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 2/36 (5%)
Query: 49 NERLG--RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+ERL RPLSPHL++YK IT +SI HR +G AL
Sbjct: 8 SERLAAARPLSPHLSVYKPIITMAMSIAHRISGAAL 43
>gi|399991587|ref|YP_006571827.1| succinate dehydrogenase cytochrome b556 subunit [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
gi|400753227|ref|YP_006561595.1| succinate dehydrogenase cytochrome b556 subunit [Phaeobacter
gallaeciensis 2.10]
gi|398652380|gb|AFO86350.1| succinate dehydrogenase cytochrome b556 subunit [Phaeobacter
gallaeciensis 2.10]
gi|398656142|gb|AFO90108.1| succinate dehydrogenase cytochrome b556 subunit [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
Length = 127
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 27/41 (65%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLA 90
R RPLSPHL +Y+ QITS+ SI R TG AL AL +A
Sbjct: 5 NRGNRPLSPHLQVYRPQITSITSILTRITGNALIVSALLIA 45
>gi|254567019|ref|XP_002490620.1| Putative protein of unknown function [Komagataella pastoris
GS115]
gi|238030416|emb|CAY68340.1| Putative protein of unknown function [Komagataella pastoris
GS115]
Length = 177
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 30 IKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA--YAL 87
I+ V+ +E + +R RP SPHLTIY Q+T +LS HR TGV L YAL
Sbjct: 31 IRNVSTVKASHDEEQEILVAQRKVRPSSPHLTIYAPQLTWILSSFHRITGVGLAGGFYAL 90
>gi|440632594|gb|ELR02513.1| hypothetical protein GMDG_01039 [Geomyces destructans 20631-21]
Length = 187
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 28 ITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL--TAY 85
I +PVA P+ + +R RP+SPHL IY+ QIT S+ +R TG L T Y
Sbjct: 38 IQTRPVATQKLTPADSYKILVEQRRLRPVSPHLGIYRPQITWYASMFNRITGAVLSGTFY 97
Query: 86 ALGL 89
G+
Sbjct: 98 LFGI 101
>gi|259415023|ref|ZP_05738945.1| succinate dehydrogenase, cytochrome b556 subunit [Silicibacter
sp. TrichCH4B]
gi|259348933|gb|EEW60687.1| succinate dehydrogenase, cytochrome b556 subunit [Silicibacter
sp. TrichCH4B]
Length = 127
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 29/40 (72%), Gaps = 4/40 (10%)
Query: 51 RLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLA 90
R RPLSPHLTIY+ Q+TS+ SI R TG+A ALG+A
Sbjct: 6 RGNRPLSPHLTIYRPQLTSMSSIMVRITGIA----ALGVA 41
>gi|291226844|ref|XP_002733400.1| PREDICTED: succinate dehydrogenase complex, subunit C-like
[Saccoglossus kowalevskii]
Length = 174
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 21/76 (27%)
Query: 34 AAPTGVP---------SKEGHAVRNE-------RLGRPLSPHLTIYKLQITSVLSITHRG 77
+AP+ VP +E + +NE LGRP SP IY Q+T++LSITHR
Sbjct: 17 SAPSKVPLYALEDKKEKEEFYEFQNETFWNKQYALGRPRSP-FWIYDPQLTAILSITHRA 75
Query: 78 TG----VALTAYALGL 89
TG ++ +A+G+
Sbjct: 76 TGAIMMCSIATFAVGM 91
>gi|121602258|ref|YP_988426.1| succinate dehydrogenase, cytochrome b556 subunit [Bartonella
bacilliformis KC583]
gi|421760246|ref|ZP_16197065.1| succinate dehydrogenase cytochrome b560 subunit [Bartonella
bacilliformis INS]
gi|120614435|gb|ABM45036.1| succinate dehydrogenase, cytochrome b556 subunit [Bartonella
bacilliformis KC583]
gi|411175963|gb|EKS45984.1| succinate dehydrogenase cytochrome b560 subunit [Bartonella
bacilliformis INS]
Length = 133
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RP SPH+TIY+ IT +SI HR TG+A+
Sbjct: 10 RPRSPHVTIYRWSITMAMSIAHRITGIAI 38
>gi|328351008|emb|CCA37408.1| hypothetical protein PP7435_Chr1-1289 [Komagataella pastoris CBS
7435]
Length = 175
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 30 IKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA--YAL 87
I+ V+ +E + +R RP SPHLTIY Q+T +LS HR TGV L YAL
Sbjct: 29 IRNVSTVKASHDEEQEILVAQRKVRPSSPHLTIYAPQLTWILSSFHRITGVGLAGGFYAL 88
>gi|325917571|ref|ZP_08179771.1| succinate dehydrogenase subunit C [Xanthomonas vesicatoria ATCC
35937]
gi|325536205|gb|EGD08001.1| succinate dehydrogenase subunit C [Xanthomonas vesicatoria ATCC
35937]
Length = 131
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALT 83
RPLSPHL +Y+ QI V SI +R TG+ L+
Sbjct: 6 RPLSPHLQVYRWQIQMVTSILNRATGIVLS 35
>gi|119183341|ref|XP_001242721.1| hypothetical protein CIMG_06617 [Coccidioides immitis RS]
Length = 305
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 49 NERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
+RL RP+SPHLTIY+ QI+ LS +R TG L+
Sbjct: 178 QQRLNRPVSPHLTIYRPQISWYLSALNRITGSVLS 212
>gi|343425083|emb|CBQ68620.1| related to SDH3-cytochrome b560 subunit of respiratory complex II
[Sporisorium reilianum SRZ2]
Length = 199
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 34 AAPTGVPSKEGHAVRNE-RLGRPLSPHLTIYKLQITSVLSITHR--GTGVALTAYA 86
AA T + ++ + NE R RP SPH IY+ QIT LSI +R GTG+++ YA
Sbjct: 54 AATTKLTQQQNLELLNEQRAKRPSSPHFAIYQPQITWYLSIINRITGTGLSVLMYA 109
>gi|406860337|gb|EKD13396.1| succinate dehydrogenase cytochrome b subunit [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 188
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 39/80 (48%), Gaps = 17/80 (21%)
Query: 28 ITIKPVAAPTGVPSK------EGHAVR---------NERLGRPLSPHLTIYKLQITSVLS 72
I K VAAP V SK H V +R RP SP+L IYK QIT +LS
Sbjct: 24 IAFKKVAAPMAVASKIQTRPVATHKVSVADSSEILVAQRKLRPTSPNLGIYKPQITWILS 83
Query: 73 ITHRGTG--VALTAYALGLA 90
+R TG VA+ Y GLA
Sbjct: 84 SLNRVTGLTVAVPFYLFGLA 103
>gi|359409198|ref|ZP_09201666.1| succinate dehydrogenase, cytochrome b556 subunit [SAR116 cluster
alpha proteobacterium HIMB100]
gi|356675951|gb|EHI48304.1| succinate dehydrogenase, cytochrome b556 subunit [SAR116 cluster
alpha proteobacterium HIMB100]
Length = 125
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 26/31 (83%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
RPLSPHL IY+L + +++SI+HR +GV L++
Sbjct: 5 RPLSPHLQIYRLPLPALMSISHRLSGVVLSS 35
>gi|11022654|dbj|BAB17027.1| unnamed protein product [Arabidopsis thaliana]
Length = 240
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVPTY 105
RPLSPHL++Y+ Q+ S+LSI +R +GV LT + AG L + + TY
Sbjct: 152 RPLSPHLSVYQPQMNSMLSIFNRISGVYLT--GVTFAGYLLYLKMGMICLTY 201
>gi|71019831|ref|XP_760146.1| hypothetical protein UM03999.1 [Ustilago maydis 521]
gi|46099776|gb|EAK85009.1| hypothetical protein UM03999.1 [Ustilago maydis 521]
Length = 193
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 47 VRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT-AYA 86
+ +R RP SPH TIY+ QIT +LSI +R TG L+ +YA
Sbjct: 69 LNQQRAQRPSSPHFTIYQPQITWLLSIINRITGTGLSVSYA 109
>gi|291336334|gb|ADD95894.1| succinate dehydrogenase cytochrome b556 subunit [uncultured
marine bacterium MedDCM-OCT-S08-C1068]
Length = 70
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 23/27 (85%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGV 80
RPLSPH+ IY+ I+S++SI+HR TG+
Sbjct: 5 RPLSPHIQIYRWHISSLVSISHRITGI 31
>gi|302896466|ref|XP_003047113.1| hypothetical protein NECHADRAFT_70858 [Nectria haematococca mpVI
77-13-4]
gi|256728041|gb|EEU41400.1| hypothetical protein NECHADRAFT_70858 [Nectria haematococca mpVI
77-13-4]
Length = 189
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 10/90 (11%)
Query: 25 IRTITIKPVAAPTGVPSKEGHAVR-NERLGRPLSPHLTIYKLQITSV-LSITHRGTGVAL 82
I T +PVA+ T + +EG + N+RL RP+SPHL IYK++ T S +R TG L
Sbjct: 36 ISTTPSRPVAS-TKLSQEEGRQLLVNQRLNRPVSPHLGIYKMEQTWFGSSAWNRITGCTL 94
Query: 83 TAYALGLAG-------VGLTTDINSVVPTY 105
+A G VGL + SV +
Sbjct: 95 SATMYAFMGAYLVAPVVGLHLETASVAAAF 124
>gi|170744094|ref|YP_001772749.1| succinate dehydrogenase, cytochrome b556 subunit
[Methylobacterium sp. 4-46]
gi|168198368|gb|ACA20315.1| succinate dehydrogenase, cytochrome b556 subunit
[Methylobacterium sp. 4-46]
Length = 133
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 52 LGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+ RPLSPHL IY+ T +S+ HR TG+AL
Sbjct: 9 VARPLSPHLQIYRWTWTMAMSVAHRLTGIAL 39
>gi|410078980|ref|XP_003957071.1| hypothetical protein KAFR_0D02880 [Kazachstania africana CBS
2517]
gi|372463656|emb|CCF57936.1| hypothetical protein KAFR_0D02880 [Kazachstania africana CBS
2517]
Length = 196
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 17/80 (21%)
Query: 10 LCNP----IASSHLRLLPHIRTITIKPVAAPTGVPSK---------EGHAVRNERLGRPL 56
LC P +AS +R L +T + ++ + SK E + +R RP+
Sbjct: 15 LCRPTVQNVASGQMRTL----YVTKRYLSITRQLQSKVPYINETKGESDILVEQRKARPI 70
Query: 57 SPHLTIYKLQITSVLSITHR 76
SPHLTIY+ QIT LS HR
Sbjct: 71 SPHLTIYQPQITWYLSSIHR 90
>gi|452985403|gb|EME85160.1| hypothetical protein MYCFIDRAFT_7820, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 125
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 39 VPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA--YALGL 89
V + + N+RL RP +PHL+I + QI S LSI+ R TG ++ Y G
Sbjct: 14 VMQDKNQILANQRLSRPTAPHLSISRPQINSFLSISMRITGSFMSGGMYLFGF 66
>gi|220926986|ref|YP_002502288.1| succinate dehydrogenase, cytochrome b556 subunit
[Methylobacterium nodulans ORS 2060]
gi|219951593|gb|ACL61985.1| succinate dehydrogenase, cytochrome b556 subunit
[Methylobacterium nodulans ORS 2060]
Length = 133
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IY+ T +S+ HR TG+AL
Sbjct: 11 RPLSPHLQIYRWTWTMAMSVAHRLTGIAL 39
>gi|300024743|ref|YP_003757354.1| succinate dehydrogenase, cytochrome b556 subunit [Hyphomicrobium
denitrificans ATCC 51888]
gi|299526564|gb|ADJ25033.1| succinate dehydrogenase, cytochrome b556 subunit [Hyphomicrobium
denitrificans ATCC 51888]
Length = 137
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 24/35 (68%)
Query: 48 RNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
R+ R RPLSPHL IY I ++SI HR TGVAL
Sbjct: 7 RSSRPERPLSPHLQIYSPLINMMMSIVHRITGVAL 41
>gi|395781387|ref|ZP_10461805.1| succinate dehydrogenase, cytochrome b556 subunit [Bartonella
rattimassiliensis 15908]
gi|395420820|gb|EJF87078.1| succinate dehydrogenase, cytochrome b556 subunit [Bartonella
rattimassiliensis 15908]
Length = 133
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RP SPH++IY+ IT +SI HR TGVAL
Sbjct: 10 RPRSPHVSIYRWTITMAMSIAHRITGVAL 38
>gi|319899436|ref|YP_004159533.1| SdhC succinate dehydrogenase cytochrome b-556 subunit [Bartonella
clarridgeiae 73]
gi|319403404|emb|CBI76972.1| SdhC succinate dehydrogenase cytochrome b-556 subunit [Bartonella
clarridgeiae 73]
Length = 152
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 24/37 (64%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLA 90
RP SPHL+IY+ IT +SI HR TGV L L LA
Sbjct: 29 RPRSPHLSIYRWSITMAISIAHRITGVMLYFGMLFLA 65
>gi|344302965|gb|EGW33239.1| hypothetical protein SPAPADRAFT_60576 [Spathaspora passalidarum
NRRL Y-27907]
Length = 177
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+R RP SPHLTIY+ QIT ++S HR TGV +
Sbjct: 50 QRKNRPGSPHLTIYQPQITWIMSSFHRITGVFM 82
>gi|15242460|ref|NP_196522.1| succinate dehydrogenase 3-1 [Arabidopsis thaliana]
gi|186515438|ref|NP_194948.2| succinate dehydrogenase 3-2 [Arabidopsis thaliana]
gi|334187559|ref|NP_001190268.1| succinate dehydrogenase 3-1 [Arabidopsis thaliana]
gi|7671429|emb|CAB89370.1| putative protein [Arabidopsis thaliana]
gi|17979473|gb|AAL50073.1| AT5g09600/F17I14_210 [Arabidopsis thaliana]
gi|18650626|gb|AAL75912.1| AT5g09600/F17I14_210 [Arabidopsis thaliana]
gi|20142337|tpg|DAA00014.1| TPA_exp: succinate dehydrogenase subunit 3 [Arabidopsis thaliana]
gi|20142339|tpg|DAA00015.1| TPA_exp: succinate dehydrogenase subunit 3 [Arabidopsis thaliana]
gi|33589714|gb|AAQ22623.1| At5g09600/F17I14_210 [Arabidopsis thaliana]
gi|332004031|gb|AED91414.1| succinate dehydrogenase 3-1 [Arabidopsis thaliana]
gi|332004033|gb|AED91416.1| succinate dehydrogenase 3-1 [Arabidopsis thaliana]
gi|332660620|gb|AEE86020.1| succinate dehydrogenase 3-2 [Arabidopsis thaliana]
Length = 213
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVPTY 105
RPLSPHL++Y+ Q+ S+LSI +R +GV LT + AG L + + TY
Sbjct: 125 RPLSPHLSVYQPQMNSMLSIFNRISGVYLT--GVTFAGYLLYLKMGMICLTY 174
>gi|57013903|ref|YP_173376.1| succinate dehydrogenase subunit 3 [Nicotiana tabacum]
gi|57013992|ref|YP_173464.1| succinate dehydrogenase subunit 3 [Nicotiana tabacum]
gi|57014032|ref|YP_173503.1| succinate dehydrogenase subunit 3 [Nicotiana tabacum]
gi|56806628|dbj|BAD83529.1| succinate dehydrogenase subunit 3 (mitochondrion) [Nicotiana
tabacum]
gi|56806668|dbj|BAD83569.1| succinate dehydrogenase subunit 3 (mitochondrion) [Nicotiana
tabacum]
Length = 108
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 22/29 (75%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYK Q+TS SI+HR +G L
Sbjct: 5 RPLSPHLPIYKPQLTSTFSISHRISGAFL 33
>gi|21593777|gb|AAM65744.1| unknown [Arabidopsis thaliana]
Length = 213
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVPTY 105
RPLSPHL++Y+ Q+ S+LSI +R +GV LT + AG L + + TY
Sbjct: 125 RPLSPHLSVYQPQMNSMLSIFNRISGVYLT--GVTFAGYLLYLKMGMICLTY 174
>gi|118590533|ref|ZP_01547935.1| succinate dehydrogenase cytochrome B-556 subunit [Stappia
aggregata IAM 12614]
gi|118436996|gb|EAV43635.1| succinate dehydrogenase cytochrome B-556 subunit [Stappia
aggregata IAM 12614]
Length = 132
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 24/34 (70%)
Query: 49 NERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+ R RPLSPHL IYK +T V+SI HR TG AL
Sbjct: 5 DLRGNRPLSPHLQIYKPILTMVMSILHRITGAAL 38
>gi|418053699|ref|ZP_12691755.1| succinate dehydrogenase, cytochrome b556 subunit [Hyphomicrobium
denitrificans 1NES1]
gi|353211324|gb|EHB76724.1| succinate dehydrogenase, cytochrome b556 subunit [Hyphomicrobium
denitrificans 1NES1]
Length = 137
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 27/43 (62%)
Query: 48 RNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLA 90
R+ R RPLSPHL IY I V+SI HR TG AL +L LA
Sbjct: 7 RSARPERPLSPHLQIYSPLINMVMSILHRITGAALYVGSLLLA 49
>gi|312112888|ref|YP_004010484.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodomicrobium
vannielii ATCC 17100]
gi|311218017|gb|ADP69385.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodomicrobium
vannielii ATCC 17100]
Length = 148
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 22/27 (81%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGV 80
+P+SPHL+IY+ +I +LSI HR TG+
Sbjct: 16 KPMSPHLSIYRFKINMILSIMHRVTGI 42
>gi|145334347|ref|NP_001078555.1| succinate dehydrogenase 3-1 [Arabidopsis thaliana]
gi|332004032|gb|AED91415.1| succinate dehydrogenase 3-1 [Arabidopsis thaliana]
Length = 186
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVPTY 105
RPLSPHL++Y+ Q+ S+LSI +R +GV LT + AG L + + TY
Sbjct: 98 RPLSPHLSVYQPQMNSMLSIFNRISGVYLT--GVTFAGYLLYLKMGMICLTY 147
>gi|403213772|emb|CCK68274.1| hypothetical protein KNAG_0A06120 [Kazachstania naganishii CBS
8797]
Length = 183
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 11/65 (16%)
Query: 43 EGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYAL----------GLAGV 92
EG + +R RP+SPHLTIY+ Q+T LS HR + +A GL G+
Sbjct: 49 EGRLLIEQRKARPISPHLTIYQPQLTWYLSSVHR-VSLVFMGFAFYLVTILFGVSGLLGL 107
Query: 93 GLTTD 97
+TT+
Sbjct: 108 NVTTE 112
>gi|218507957|ref|ZP_03505835.1| succinate dehydrogenase protein, cytochrome b subunit [Rhizobium
etli Brasil 5]
Length = 111
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 22/29 (75%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL +YKL T V+SI HR TG AL
Sbjct: 8 RPLSPHLQVYKLIPTMVMSIVHRITGGAL 36
>gi|378786308|dbj|BAL63243.1| succinate: cytochrome c oxidoreductase subunit 3 (mitochondrion)
[Pyropia pseudolinearis]
Length = 129
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+ RP+SPHLTIY Q S+ SI HR +GV +
Sbjct: 2 RNINRPISPHLTIYNPQKASIFSIWHRISGVIM 34
>gi|114707253|ref|ZP_01440151.1| succinate dehydrogenase cytochrome B-556 subunit protein
[Fulvimarina pelagi HTCC2506]
gi|114537449|gb|EAU40575.1| succinate dehydrogenase cytochrome B-556 subunit protein
[Fulvimarina pelagi HTCC2506]
Length = 129
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 22/29 (75%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL+IYK + T +SI HR TG AL
Sbjct: 8 RPLSPHLSIYKFRPTMAMSIVHRITGGAL 36
>gi|395780583|ref|ZP_10461045.1| succinate dehydrogenase, cytochrome b556 subunit [Bartonella
washoensis 085-0475]
gi|395418929|gb|EJF85246.1| succinate dehydrogenase, cytochrome b556 subunit [Bartonella
washoensis 085-0475]
Length = 133
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RP SPHL+IY+ IT +SI HR TGV L
Sbjct: 10 RPRSPHLSIYRWSITMAMSIAHRITGVGL 38
>gi|423711819|ref|ZP_17686124.1| succinate dehydrogenase, cytochrome b556 subunit [Bartonella
washoensis Sb944nv]
gi|395412667|gb|EJF79147.1| succinate dehydrogenase, cytochrome b556 subunit [Bartonella
washoensis Sb944nv]
Length = 133
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RP SPHL+IY+ IT +SI HR TGV L
Sbjct: 10 RPRSPHLSIYRWSITMAMSIAHRITGVGL 38
>gi|115399864|ref|XP_001215521.1| predicted protein [Aspergillus terreus NIH2624]
gi|114191187|gb|EAU32887.1| predicted protein [Aspergillus terreus NIH2624]
Length = 198
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 39 VPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
V + H R +RL RP+SPHL IY+ ++ + S R TG+ L+
Sbjct: 60 VEQGQQHLAR-QRLRRPVSPHLAIYRWEMNMISSAMERNTGIMLS 103
>gi|83953490|ref|ZP_00962212.1| succinate dehydrogenase, cytochrome b556 subunit [Sulfitobacter
sp. NAS-14.1]
gi|83842458|gb|EAP81626.1| succinate dehydrogenase, cytochrome b556 subunit [Sulfitobacter
sp. NAS-14.1]
Length = 127
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 26/38 (68%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYAL 87
R RPLSPHLTIY+ Q+TS+ SI R TG A+ AL
Sbjct: 5 NRGNRPLSPHLTIYRPQLTSMTSILTRITGNAMLVAAL 42
>gi|417109583|ref|ZP_11963264.1| succinate dehydrogenase cytochrome B-556 subunit protein
[Rhizobium etli CNPAF512]
gi|327188889|gb|EGE56081.1| succinate dehydrogenase cytochrome B-556 subunit protein
[Rhizobium etli CNPAF512]
Length = 146
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 22/29 (75%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL +YKL T V+SI HR TG AL
Sbjct: 23 RPLSPHLQVYKLIPTMVMSIVHRITGGAL 51
>gi|328541811|ref|YP_004301920.1| Succinate dehydrogenase, cytochrome b556 subunit [Polymorphum
gilvum SL003B-26A1]
gi|326411563|gb|ADZ68626.1| Succinate dehydrogenase, cytochrome b556 subunit [Polymorphum
gilvum SL003B-26A1]
Length = 132
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 50 ERLG-RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+R G RPLSPHL IYK +T V+SI HR TG AL
Sbjct: 5 DRQGNRPLSPHLQIYKPILTMVMSILHRITGAAL 38
>gi|88812336|ref|ZP_01127586.1| Succinate dehydrogenase/fumarate reductase, cytochrome b subunit
[Nitrococcus mobilis Nb-231]
gi|88790343|gb|EAR21460.1| Succinate dehydrogenase/fumarate reductase, cytochrome b subunit
[Nitrococcus mobilis Nb-231]
Length = 126
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGV 92
RPLSPHL IY+ T + SITHR TG L ALG GV
Sbjct: 6 RPLSPHLQIYRFPTTVITSITHRITGALL---ALGTLGV 41
>gi|378728697|gb|EHY55156.1| succinate dehydrogenase (ubiquinone) cytochrome B subunit
[Exophiala dermatitidis NIH/UT8656]
Length = 195
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 28 ITIKPVAAPTGVPSKEGHAV-RNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL--TA 84
+ +P A+ V E + +R RP+SPHL IY+ Q+T LS +R TG L T
Sbjct: 46 LQYRPAASTAHVSQSEAEQILAAQRRHRPVSPHLAIYRPQVTWYLSALNRITGATLAGTL 105
Query: 85 YALGLA 90
Y G A
Sbjct: 106 YVFGAA 111
>gi|86359478|ref|YP_471370.1| succinate dehydrogenase cytochrome B-556 subunit protein
[Rhizobium etli CFN 42]
gi|190893746|ref|YP_001980288.1| succinate dehydrogenase, cytochrome b subunit [Rhizobium etli
CIAT 652]
gi|218515347|ref|ZP_03512187.1| succinate dehydrogenase protein, cytochrome b subunit [Rhizobium
etli 8C-3]
gi|86283580|gb|ABC92643.1| succinate dehydrogenase cytochrome B-556 subunit protein
[Rhizobium etli CFN 42]
gi|190699025|gb|ACE93110.1| succinate dehydrogenase protein, cytochrome b subunit [Rhizobium
etli CIAT 652]
Length = 131
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 22/29 (75%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL +YKL T V+SI HR TG AL
Sbjct: 8 RPLSPHLQVYKLIPTMVMSIVHRITGGAL 36
>gi|378786328|dbj|BAL63256.1| succinate:cytochrome c oxidoreductase subunit 3 (mitochondrion)
[Porphyra kuniedae]
Length = 129
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+ RP+SPHLTIY Q +S+ SI HR +G +
Sbjct: 2 HNINRPISPHLTIYSPQTSSIFSIWHRISGFVM 34
>gi|296808871|ref|XP_002844774.1| succinate dehydrogenase cytochrome b560 subunit [Arthroderma otae
CBS 113480]
gi|238844257|gb|EEQ33919.1| succinate dehydrogenase cytochrome b560 subunit [Arthroderma otae
CBS 113480]
Length = 225
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 49 NERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
+RL RP+SPHL+IY+ QIT LS +R TG L+
Sbjct: 98 KQRLNRPVSPHLSIYRPQITWYLSSLNRITGAILS 132
>gi|254487864|ref|ZP_05101069.1| succinate dehydrogenase, cytochrome b556 subunit [Roseobacter sp.
GAI101]
gi|214044733|gb|EEB85371.1| succinate dehydrogenase, cytochrome b556 subunit [Roseobacter sp.
GAI101]
Length = 127
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 26/38 (68%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYAL 87
R RPLSPHLTIY+ Q+TS+ SI R TG A+ AL
Sbjct: 5 NRGNRPLSPHLTIYRPQLTSMTSILTRITGNAMLVAAL 42
>gi|197103676|ref|YP_002129053.1| succinate dehydrogenase cytochrome b-556 subunit
[Phenylobacterium zucineum HLK1]
gi|196477096|gb|ACG76624.1| succinate dehydrogenase cytochrome b-556 subunit
[Phenylobacterium zucineum HLK1]
Length = 129
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 27/45 (60%), Gaps = 7/45 (15%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL-------TAYALGLAG 91
RP SPH TI++ +T SI HR TGVAL A+AL LAG
Sbjct: 5 RPTSPHTTIWRWHLTMATSILHRITGVALYGGALIAAAWALSLAG 49
>gi|83943849|ref|ZP_00956306.1| succinate dehydrogenase, cytochrome b556 subunit [Sulfitobacter
sp. EE-36]
gi|83845096|gb|EAP82976.1| succinate dehydrogenase, cytochrome b556 subunit [Sulfitobacter
sp. EE-36]
Length = 127
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 26/38 (68%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYAL 87
R RPLSPHLTIY+ Q+TS+ SI R TG A+ AL
Sbjct: 5 NRGNRPLSPHLTIYRPQLTSMTSILTRITGNAMLVAAL 42
>gi|90421600|ref|YP_529970.1| succinate dehydrogenase, cytochrome b subunit [Rhodopseudomonas
palustris BisB18]
gi|90103614|gb|ABD85651.1| succinate dehydrogenase subunit C [Rhodopseudomonas palustris
BisB18]
Length = 132
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 51 RLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
R+ RPLSPH+ Y+ +T LSI HR TG+ L
Sbjct: 4 RIERPLSPHMQAYRWSLTMALSIVHRLTGITL 35
>gi|260431521|ref|ZP_05785492.1| succinate dehydrogenase, cytochrome b556 subunit [Silicibacter
lacuscaerulensis ITI-1157]
gi|260415349|gb|EEX08608.1| succinate dehydrogenase, cytochrome b556 subunit [Silicibacter
lacuscaerulensis ITI-1157]
Length = 128
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 26/38 (68%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYAL 87
R RPLSPHL+IY+ Q+TSV SI R TG A+ AL
Sbjct: 5 NRGNRPLSPHLSIYRPQLTSVTSILTRITGNAMLVAAL 42
>gi|119385745|ref|YP_916800.1| succinate dehydrogenase, cytochrome b subunit [Paracoccus
denitrificans PD1222]
gi|119376340|gb|ABL71104.1| succinate dehydrogenase subunit C [Paracoccus denitrificans
PD1222]
Length = 125
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 27/37 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLA 90
RP SP++ Y+ Q+TSVLS HR +GVA + ALGLA
Sbjct: 5 RPKSPNMQNYRPQLTSVLSFGHRLSGVAQSLGALGLA 41
>gi|1345639|sp|P48935.1|C560_CYACA RecName: Full=Succinate dehydrogenase cytochrome b560 subunit;
AltName: Full=Succinate dehydrogenase, subunit III
gi|758171|emb|CAA88765.1| succinate dehydrogenase (cytochrome b560 subunit) [Cyanidium
caldarium]
Length = 132
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 53 GRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGL 89
RPLSP++TIY Q TS+ SI HR +G+ L + L
Sbjct: 5 NRPLSPYVTIYSSQWTSISSIFHRLSGLYLVFFLFVL 41
>gi|125537865|gb|EAY84260.1| hypothetical protein OsI_05640 [Oryza sativa Indica Group]
Length = 168
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 30 IKPVAAPTGV-PSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
++P P+G P H + RPLSPHL + K Q+++ SI+HR G AL A
Sbjct: 96 VRPKMLPSGCRPLHTSHPLSAPVANRPLSPHLPLKKPQLSATFSISHRIFGAALGA 151
>gi|295311666|ref|YP_003587250.1| succinate dehydrogenase subunit 3 [Citrullus lanatus]
gi|295311667|ref|YP_003587234.1| succinate dehydrogenase subunit 3 [Citrullus lanatus]
gi|259156794|gb|ACV96656.1| succinate dehydrogenase subunit 3 [Citrullus lanatus]
gi|259156795|gb|ACV96657.1| succinate dehydrogenase subunit 3 [Citrullus lanatus]
Length = 95
Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYK Q+TS SI HR +G L
Sbjct: 5 RPLSPHLPIYKPQLTSTFSIFHRISGAFL 33
>gi|240851320|ref|YP_002972723.1| succinate dehydrogenase cytochrome b560 subunit [Bartonella
grahamii as4aup]
gi|240268443|gb|ACS52031.1| succinate dehydrogenase cytochrome b560 subunit [Bartonella
grahamii as4aup]
Length = 133
Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RP SPH++IY+ IT +SI HR TG+AL
Sbjct: 10 RPRSPHISIYRWTITMAMSIAHRVTGMAL 38
>gi|395767664|ref|ZP_10448197.1| succinate dehydrogenase, cytochrome b556 subunit [Bartonella
doshiae NCTC 12862]
gi|395414027|gb|EJF80480.1| succinate dehydrogenase, cytochrome b556 subunit [Bartonella
doshiae NCTC 12862]
Length = 133
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RP SPH++IY+ IT +SI HR TG+AL
Sbjct: 10 RPRSPHISIYRWSITMAMSIAHRITGMAL 38
>gi|440799410|gb|ELR20461.1| succinate dehydrogenase, cytochrome b556 subunit protein
[Acanthamoeba castellanii str. Neff]
Length = 172
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 25/31 (80%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
RPLSPH++IY+ + ++ SIT+R TG ALTA
Sbjct: 52 RPLSPHVSIYRFPLPALTSITNRATGGALTA 82
>gi|395792753|ref|ZP_10472177.1| succinate dehydrogenase, cytochrome b556 subunit [Bartonella
vinsonii subsp. arupensis Pm136co]
gi|423713416|ref|ZP_17687676.1| succinate dehydrogenase, cytochrome b556 subunit [Bartonella
vinsonii subsp. arupensis OK-94-513]
gi|395423457|gb|EJF89652.1| succinate dehydrogenase, cytochrome b556 subunit [Bartonella
vinsonii subsp. arupensis OK-94-513]
gi|395432310|gb|EJF98299.1| succinate dehydrogenase, cytochrome b556 subunit [Bartonella
vinsonii subsp. arupensis Pm136co]
Length = 133
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
R RP SPH++IY+ IT +SI HR TG+AL
Sbjct: 6 RRKERPRSPHVSIYRWTITMAMSIAHRITGMAL 38
>gi|338741409|ref|YP_004678371.1| succinate dehydrogenase, cytochrome b556 subunit [Hyphomicrobium
sp. MC1]
gi|337761972|emb|CCB67807.1| succinate dehydrogenase, cytochrome b556 subunit [Hyphomicrobium
sp. MC1]
Length = 136
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 26/43 (60%)
Query: 48 RNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLA 90
R R RPLSPHL IY I V+SI HR TG AL +L LA
Sbjct: 7 RGVRPKRPLSPHLQIYSPLINMVMSIVHRITGAALYFGSLLLA 49
>gi|261220959|ref|ZP_05935240.1| succinate dehydrogenase cytochrome b556 subunit [Brucella ceti
B1/94]
gi|265996918|ref|ZP_06109475.1| succinate dehydrogenase cytochrome b556 subunit [Brucella ceti
M490/95/1]
gi|260919543|gb|EEX86196.1| succinate dehydrogenase cytochrome b556 subunit [Brucella ceti
B1/94]
gi|262551386|gb|EEZ07376.1| succinate dehydrogenase cytochrome b556 subunit [Brucella ceti
M490/95/1]
Length = 142
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 22/29 (75%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL+IYK IT +SI HR TG AL
Sbjct: 20 RPLSPHLSIYKPVITMTMSIVHRITGGAL 48
>gi|224365626|ref|YP_002608354.1| succinate dehydrogenase subunit 3 [Vitis vinifera]
gi|209954150|emb|CAQ77586.1| succinate dehydrogenase subunit 3 [Vitis vinifera]
gi|239764777|gb|ACS15245.1| succinate dehydrogenase subunit 3 [Vitis vinifera]
Length = 168
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 42 KEGHAVRNER-LGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYAL 87
+ G+ + N + + RPLSPHL IYK Q+TS I HR +G L L
Sbjct: 53 RRGNLINNRKNILRPLSPHLPIYKPQLTSTFPIYHRISGAFLATLVL 99
>gi|222150048|ref|YP_002551005.1| succinate dehydrogenase cytochrome B-556 subunit [Agrobacterium
vitis S4]
gi|221737030|gb|ACM37993.1| succinate dehydrogenase cytochrome B-556 subunit [Agrobacterium
vitis S4]
Length = 130
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 22/29 (75%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYKL T ++SI HR TG AL
Sbjct: 8 RPLSPHLQIYKLVPTMLMSIVHRITGGAL 36
>gi|346994754|ref|ZP_08862826.1| succinate dehydrogenase cytochrome b556 subunit [Ruegeria sp.
TW15]
Length = 127
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 24/32 (75%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVA 81
R RPLSPHLTIY+ Q+TS+ SI R TG+A
Sbjct: 5 NRGNRPLSPHLTIYRPQMTSISSIMVRITGLA 36
>gi|295311709|ref|YP_003587361.1| succinate dehydrogenase subunit 3 [Cucurbita pepo]
gi|259156837|gb|ACV96698.1| succinate dehydrogenase subunit 3 [Cucurbita pepo]
Length = 105
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 24/41 (58%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGL 94
RPLSPHL IYK Q+TS SI HR +G L L + L
Sbjct: 5 RPLSPHLPIYKPQLTSTFSIFHRISGAFLATLVLFFYLLCL 45
>gi|260546025|ref|ZP_05821765.1| succinate dehydrogenase [Brucella abortus NCTC 8038]
gi|260562821|ref|ZP_05833307.1| succinate dehydrogenase [Brucella melitensis bv. 1 str. 16M]
gi|260567607|ref|ZP_05838077.1| succinate dehydrogenase [Brucella suis bv. 4 str. 40]
gi|260755583|ref|ZP_05867931.1| succinate dehydrogenase cytochrome b556 subunit [Brucella abortus
bv. 6 str. 870]
gi|260758809|ref|ZP_05871157.1| succinate dehydrogenase cytochrome b556 subunit [Brucella abortus
bv. 4 str. 292]
gi|260760533|ref|ZP_05872876.1| succinate dehydrogenase cytochrome b556 subunit [Brucella abortus
bv. 2 str. 86/8/59]
gi|260884609|ref|ZP_05896223.1| succinate dehydrogenase cytochrome b556 subunit [Brucella abortus
bv. 9 str. C68]
gi|261214856|ref|ZP_05929137.1| succinate dehydrogenase cytochrome b556 subunit [Brucella abortus
bv. 3 str. Tulya]
gi|261217733|ref|ZP_05932014.1| succinate dehydrogenase cytochrome b556 subunit [Brucella ceti
M13/05/1]
gi|261315053|ref|ZP_05954250.1| succinate dehydrogenase cytochrome b556 subunit [Brucella
pinnipedialis M163/99/10]
gi|261316390|ref|ZP_05955587.1| succinate dehydrogenase cytochrome b556 subunit [Brucella
pinnipedialis B2/94]
gi|261321419|ref|ZP_05960616.1| succinate dehydrogenase cytochrome b556 subunit [Brucella ceti
M644/93/1]
gi|261751052|ref|ZP_05994761.1| succinate dehydrogenase cytochrome b556 subunit [Brucella suis
bv. 5 str. 513]
gi|261755614|ref|ZP_05999323.1| succinate dehydrogenase cytochrome b556 subunit [Brucella suis
bv. 3 str. 686]
gi|261758847|ref|ZP_06002556.1| succinate dehydrogenase [Brucella sp. F5/99]
gi|265982914|ref|ZP_06095649.1| succinate dehydrogenase cytochrome b556 subunit [Brucella sp.
83/13]
gi|265987463|ref|ZP_06100020.1| succinate dehydrogenase cytochrome b556 subunit [Brucella
pinnipedialis M292/94/1]
gi|265991935|ref|ZP_06104492.1| succinate dehydrogenase cytochrome b556 subunit [Brucella
melitensis bv. 1 str. Rev.1]
gi|265993667|ref|ZP_06106224.1| succinate dehydrogenase cytochrome b556 subunit [Brucella
melitensis bv. 3 str. Ether]
gi|265999292|ref|ZP_05465704.2| succinate dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
gi|260096132|gb|EEW80008.1| succinate dehydrogenase [Brucella abortus NCTC 8038]
gi|260152837|gb|EEW87929.1| succinate dehydrogenase [Brucella melitensis bv. 1 str. 16M]
gi|260157125|gb|EEW92205.1| succinate dehydrogenase [Brucella suis bv. 4 str. 40]
gi|260669127|gb|EEX56067.1| succinate dehydrogenase cytochrome b556 subunit [Brucella abortus
bv. 4 str. 292]
gi|260670965|gb|EEX57786.1| succinate dehydrogenase cytochrome b556 subunit [Brucella abortus
bv. 2 str. 86/8/59]
gi|260675691|gb|EEX62512.1| succinate dehydrogenase cytochrome b556 subunit [Brucella abortus
bv. 6 str. 870]
gi|260874137|gb|EEX81206.1| succinate dehydrogenase cytochrome b556 subunit [Brucella abortus
bv. 9 str. C68]
gi|260916463|gb|EEX83324.1| succinate dehydrogenase cytochrome b556 subunit [Brucella abortus
bv. 3 str. Tulya]
gi|260922822|gb|EEX89390.1| succinate dehydrogenase cytochrome b556 subunit [Brucella ceti
M13/05/1]
gi|261294109|gb|EEX97605.1| succinate dehydrogenase cytochrome b556 subunit [Brucella ceti
M644/93/1]
gi|261295613|gb|EEX99109.1| succinate dehydrogenase cytochrome b556 subunit [Brucella
pinnipedialis B2/94]
gi|261304079|gb|EEY07576.1| succinate dehydrogenase cytochrome b556 subunit [Brucella
pinnipedialis M163/99/10]
gi|261738831|gb|EEY26827.1| succinate dehydrogenase [Brucella sp. F5/99]
gi|261740805|gb|EEY28731.1| succinate dehydrogenase cytochrome b556 subunit [Brucella suis
bv. 5 str. 513]
gi|261745367|gb|EEY33293.1| succinate dehydrogenase cytochrome b556 subunit [Brucella suis
bv. 3 str. 686]
gi|262764648|gb|EEZ10569.1| succinate dehydrogenase cytochrome b556 subunit [Brucella
melitensis bv. 3 str. Ether]
gi|263003001|gb|EEZ15294.1| succinate dehydrogenase cytochrome b556 subunit [Brucella
melitensis bv. 1 str. Rev.1]
gi|263093078|gb|EEZ17228.1| succinate dehydrogenase [Brucella melitensis bv. 2 str. 63/9]
gi|264659660|gb|EEZ29921.1| succinate dehydrogenase cytochrome b556 subunit [Brucella
pinnipedialis M292/94/1]
gi|264661506|gb|EEZ31767.1| succinate dehydrogenase cytochrome b556 subunit [Brucella sp.
83/13]
Length = 142
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 22/29 (75%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL+IYK IT +SI HR TG AL
Sbjct: 20 RPLSPHLSIYKPVITMTMSIVHRITGGAL 48
>gi|302898077|ref|XP_003047773.1| hypothetical protein NECHADRAFT_50762 [Nectria haematococca mpVI
77-13-4]
gi|256728704|gb|EEU42060.1| hypothetical protein NECHADRAFT_50762 [Nectria haematococca mpVI
77-13-4]
Length = 188
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%), Gaps = 4/49 (8%)
Query: 41 SKEGHAVR-NERLGRPLSPHLTIYKL-QITSVLSITHRGTGVAL--TAY 85
+K+GH + +RL RP++PHL+IYK+ Q+ S R TG+AL TAY
Sbjct: 49 AKDGHDILVKQRLNRPVTPHLSIYKIGQVWFSASAWTRITGIALGGTAY 97
>gi|148560663|ref|YP_001259728.1| succinate dehydrogenase, cytochrome subunit B [Brucella ovis ATCC
25840]
gi|189024973|ref|YP_001935741.1| Succinate dehydrogenase [Brucella abortus S19]
gi|225628104|ref|ZP_03786139.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella ceti
str. Cudo]
gi|237816266|ref|ZP_04595259.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella abortus
str. 2308 A]
gi|261323851|ref|ZP_05963048.1| succinate dehydrogenase cytochrome B subunit [Brucella neotomae
5K33]
gi|297247147|ref|ZP_06930865.1| succinate dehydrogenase cytochrome b-556 subunit [Brucella abortus
bv. 5 str. B3196]
gi|148371920|gb|ABQ61899.1| succinate dehydrogenase, cytochrome B subunit [Brucella ovis ATCC
25840]
gi|189020545|gb|ACD73267.1| Succinate dehydrogenase [Brucella abortus S19]
gi|225616929|gb|EEH13976.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella ceti
str. Cudo]
gi|237788333|gb|EEP62548.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella abortus
str. 2308 A]
gi|261299831|gb|EEY03328.1| succinate dehydrogenase cytochrome B subunit [Brucella neotomae
5K33]
gi|297174316|gb|EFH33663.1| succinate dehydrogenase cytochrome b-556 subunit [Brucella abortus
bv. 5 str. B3196]
Length = 187
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 25/38 (65%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAG 91
RPLSPHL+IYK IT +SI HR TG AL L LA
Sbjct: 65 RPLSPHLSIYKPVITMTMSIVHRITGGALYFGTLLLAA 102
>gi|255261406|ref|ZP_05340748.1| succinate dehydrogenase, cytochrome b556 subunit [Thalassiobium
sp. R2A62]
gi|255103741|gb|EET46415.1| succinate dehydrogenase, cytochrome b556 subunit [Thalassiobium
sp. R2A62]
Length = 127
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 26/38 (68%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYAL 87
R RPLSPHLTIY+ Q+TS+ SI R TG AL AL
Sbjct: 5 NRGNRPLSPHLTIYRPQMTSMTSIFVRLTGNALLIAAL 42
>gi|17986443|ref|NP_539077.1| succinate dehydrogenase cytochrome B-556 subunit [Brucella
melitensis bv. 1 str. 16M]
gi|23502755|ref|NP_698882.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella suis
1330]
gi|62290760|ref|YP_222553.1| SdhC, succinate dehydrogenase, cytochrome b556 subunit [Brucella
abortus bv. 1 str. 9-941]
gi|82700671|ref|YP_415245.1| succinate dehydrogenase, cytochrome subunit B [Brucella
melitensis biovar Abortus 2308]
gi|161619821|ref|YP_001593708.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella canis
ATCC 23365]
gi|163843927|ref|YP_001628331.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella suis
ATCC 23445]
gi|225853341|ref|YP_002733574.1| succinate dehydrogenase cytochrome b556 subunit [Brucella
melitensis ATCC 23457]
gi|256370306|ref|YP_003107817.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella
microti CCM 4915]
gi|294851145|ref|ZP_06791818.1| succinate dehydrogenase [Brucella sp. NVSL 07-0026]
gi|306838923|ref|ZP_07471750.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella sp. NF
2653]
gi|306842942|ref|ZP_07475576.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella sp.
BO2]
gi|306843359|ref|ZP_07475960.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella
inopinata BO1]
gi|340791493|ref|YP_004756958.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella
pinnipedialis B2/94]
gi|376272376|ref|YP_005150954.1| succinate dehydrogenase cytochrome b556 subunit [Brucella abortus
A13334]
gi|376275502|ref|YP_005115941.1| succinate dehydrogenase cytochrome b556 subunit [Brucella canis
HSK A52141]
gi|376281550|ref|YP_005155556.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella suis
VBI22]
gi|384212253|ref|YP_005601337.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella
melitensis M5-90]
gi|384225542|ref|YP_005616706.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella suis
1330]
gi|384409358|ref|YP_005597979.1| succinate dehydrogenase cytochrome b556 subunit [Brucella
melitensis M28]
gi|384445897|ref|YP_005604616.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella
melitensis NI]
gi|423168119|ref|ZP_17154822.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella
abortus bv. 1 str. NI435a]
gi|423169505|ref|ZP_17156180.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella
abortus bv. 1 str. NI474]
gi|423175505|ref|ZP_17162174.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella
abortus bv. 1 str. NI486]
gi|423177645|ref|ZP_17164290.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella
abortus bv. 1 str. NI488]
gi|423178938|ref|ZP_17165579.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella
abortus bv. 1 str. NI010]
gi|423182069|ref|ZP_17168706.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella
abortus bv. 1 str. NI016]
gi|423186989|ref|ZP_17173603.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella
abortus bv. 1 str. NI021]
gi|423190575|ref|ZP_17177183.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella
abortus bv. 1 str. NI259]
gi|17982039|gb|AAL51341.1| succinate dehydrogenase cytochrome b-556 subunit [Brucella
melitensis bv. 1 str. 16M]
gi|23348773|gb|AAN30797.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella suis
1330]
gi|62196892|gb|AAX75192.1| SdhC, succinate dehydrogenase, cytochrome b556 subunit [Brucella
abortus bv. 1 str. 9-941]
gi|82616772|emb|CAJ11859.1| Succinate dehydrogenase, cytochrome b subunit [Brucella
melitensis biovar Abortus 2308]
gi|161336632|gb|ABX62937.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella canis
ATCC 23365]
gi|163674650|gb|ABY38761.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella suis
ATCC 23445]
gi|225641706|gb|ACO01620.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella
melitensis ATCC 23457]
gi|256000469|gb|ACU48868.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella
microti CCM 4915]
gi|294819734|gb|EFG36733.1| succinate dehydrogenase [Brucella sp. NVSL 07-0026]
gi|306276050|gb|EFM57750.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella
inopinata BO1]
gi|306286870|gb|EFM58395.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella sp.
BO2]
gi|306405993|gb|EFM62245.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella sp. NF
2653]
gi|326409905|gb|ADZ66970.1| succinate dehydrogenase cytochrome b556 subunit [Brucella
melitensis M28]
gi|326539618|gb|ADZ87833.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella
melitensis M5-90]
gi|340559952|gb|AEK55190.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella
pinnipedialis B2/94]
gi|343383722|gb|AEM19214.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella suis
1330]
gi|349743886|gb|AEQ09429.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella
melitensis NI]
gi|358259149|gb|AEU06884.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella suis
VBI22]
gi|363399982|gb|AEW16952.1| succinate dehydrogenase cytochrome b556 subunit [Brucella abortus
A13334]
gi|363404069|gb|AEW14364.1| succinate dehydrogenase cytochrome b556 subunit [Brucella canis
HSK A52141]
gi|374535949|gb|EHR07470.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella
abortus bv. 1 str. NI486]
gi|374539868|gb|EHR11371.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella
abortus bv. 1 str. NI435a]
gi|374543184|gb|EHR14667.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella
abortus bv. 1 str. NI474]
gi|374549233|gb|EHR20677.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella
abortus bv. 1 str. NI488]
gi|374551882|gb|EHR23311.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella
abortus bv. 1 str. NI016]
gi|374552254|gb|EHR23682.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella
abortus bv. 1 str. NI010]
gi|374554345|gb|EHR25756.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella
abortus bv. 1 str. NI259]
gi|374557701|gb|EHR29097.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella
abortus bv. 1 str. NI021]
Length = 132
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 22/29 (75%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL+IYK IT +SI HR TG AL
Sbjct: 10 RPLSPHLSIYKPVITMTMSIVHRITGGAL 38
>gi|15004510|gb|AAK77126.1|AF362730_1 succinate dehydrogenase subunit 3 [Solanum lycopersicum]
gi|316996003|dbj|BAD83440.2| succinate dehydrogenase subunit 3 (mitochondrion) [Nicotiana
tabacum]
Length = 108
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYK Q+TS SI HR +G L
Sbjct: 5 RPLSPHLPIYKPQLTSTFSIFHRISGAFL 33
>gi|84684219|ref|ZP_01012121.1| Succinate dehydrogenase cytochrome b-556 subunit [Maritimibacter
alkaliphilus HTCC2654]
gi|84667972|gb|EAQ14440.1| Succinate dehydrogenase cytochrome b-556 subunit [Rhodobacterales
bacterium HTCC2654]
Length = 127
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 26/39 (66%), Gaps = 5/39 (12%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGV 92
RPLSPHL Y+L + + LSI HR TGV A+G +GV
Sbjct: 9 RPLSPHLQAYRLPLNAKLSILHRITGV-----AMGFSGV 42
>gi|49476235|ref|YP_034276.1| succinate dehydrogenase cytochrome b560 subunit [Bartonella
henselae str. Houston-1]
gi|49239043|emb|CAF28343.1| Succinate dehydrogenase cytochrome b560 subunit [Bartonella
henselae str. Houston-1]
Length = 133
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RP SPH++IY+ IT +SI HR TG+AL
Sbjct: 10 RPRSPHVSIYRWTITMAMSIAHRITGIAL 38
>gi|321251937|ref|XP_003192230.1| hypothetical protein CGB_B4140C [Cryptococcus gattii WM276]
gi|317458698|gb|ADV20443.1| Hypothetical Protein CGB_B4140C [Cryptococcus gattii WM276]
Length = 154
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 26 RTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
R ++ +PV V + ++R RP SPHL IY+ Q+T LS HR TGVA+
Sbjct: 9 RLVSTQPVTDAENVT-----LLNSQRQHRPTSPHLAIYQPQLTWYLSSLHRITGVAV 60
>gi|239833035|ref|ZP_04681364.1| succinate dehydrogenase, cytochrome b556 subunit [Ochrobactrum
intermedium LMG 3301]
gi|239825302|gb|EEQ96870.1| succinate dehydrogenase, cytochrome b556 subunit [Ochrobactrum
intermedium LMG 3301]
Length = 152
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 22/29 (75%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL+IYK IT +SI HR TG AL
Sbjct: 30 RPLSPHLSIYKPVITMTMSIVHRITGGAL 58
>gi|254465461|ref|ZP_05078872.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodobacterales
bacterium Y4I]
gi|206686369|gb|EDZ46851.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodobacterales
bacterium Y4I]
Length = 127
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 27/41 (65%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLA 90
R RPLSPHL +Y+ Q+TSV SI R TG AL AL +A
Sbjct: 5 NRGNRPLSPHLQVYRPQLTSVTSILTRITGNALIVSALLIA 45
>gi|254437963|ref|ZP_05051457.1| succinate dehydrogenase, cytochrome b556 subunit [Octadecabacter
antarcticus 307]
gi|198253409|gb|EDY77723.1| succinate dehydrogenase, cytochrome b556 subunit [Octadecabacter
antarcticus 307]
Length = 127
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 25/38 (65%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYAL 87
R RPLSPHLTIY+ Q TS+ SI R TG AL AL
Sbjct: 5 NRDKRPLSPHLTIYRPQWTSMTSIFTRLTGNALIVGAL 42
>gi|163869248|ref|YP_001610504.1| SdhC succinate dehydrogenase cytochrome b-556 subunit [Bartonella
tribocorum CIP 105476]
gi|161018951|emb|CAK02509.1| SdhC succinate dehydrogenase cytochrome b-556 subunit [Bartonella
tribocorum CIP 105476]
Length = 133
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RP SPH++IY+ IT +SI HR TG+AL
Sbjct: 10 RPRSPHISIYRWTITMAMSIAHRITGMAL 38
>gi|395778805|ref|ZP_10459316.1| succinate dehydrogenase, cytochrome b556 subunit [Bartonella
elizabethae Re6043vi]
gi|423714655|ref|ZP_17688879.1| succinate dehydrogenase, cytochrome b556 subunit [Bartonella
elizabethae F9251]
gi|395416980|gb|EJF83332.1| succinate dehydrogenase, cytochrome b556 subunit [Bartonella
elizabethae Re6043vi]
gi|395430874|gb|EJF96902.1| succinate dehydrogenase, cytochrome b556 subunit [Bartonella
elizabethae F9251]
Length = 133
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RP SPH++IY+ IT +SI HR TG+AL
Sbjct: 10 RPRSPHISIYRWTITMAMSIAHRITGMAL 38
>gi|357386216|ref|YP_004900940.1| succinate dehydrogenase cytochrome b-556 subunit [Pelagibacterium
halotolerans B2]
gi|351594853|gb|AEQ53190.1| succinate dehydrogenase cytochrome b-556 subunit [Pelagibacterium
halotolerans B2]
Length = 126
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL----TAYALGLAGVGLTTDINSVVPTYL 106
RP SPHL++Y+ +T LSI HR G+ L +AL L L D S V +
Sbjct: 5 RPTSPHLSVYRFTLTMTLSILHRVLGIGLYLGTVLFALWLGAAALGQDQLSAVQGFF 61
>gi|153008286|ref|YP_001369501.1| succinate dehydrogenase cytochrome b556 subunit [Ochrobactrum
anthropi ATCC 49188]
gi|404316615|ref|ZP_10964548.1| succinate dehydrogenase, cytochrome b556 subunit [Ochrobactrum
anthropi CTS-325]
gi|151560174|gb|ABS13672.1| Succinate dehydrogenase cytochrome b556 subunit [Ochrobactrum
anthropi ATCC 49188]
Length = 132
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 22/29 (75%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL+IYK IT +SI HR TG AL
Sbjct: 10 RPLSPHLSIYKPVITMTMSIVHRITGGAL 38
>gi|407798222|ref|ZP_11145130.1| succinate dehydrogenase, cytochrome b556 subunit [Oceaniovalibus
guishaninsula JLT2003]
gi|407059658|gb|EKE45586.1| succinate dehydrogenase, cytochrome b556 subunit [Oceaniovalibus
guishaninsula JLT2003]
Length = 127
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 25/38 (65%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYAL 87
R RPLSPHL+IY+ Q+ S+ SI R TG+ L AL
Sbjct: 5 NRGNRPLSPHLSIYRPQLNSITSIMTRITGIGLVVGAL 42
>gi|378786343|dbj|BAL63266.1| succinate:cytochrome c oxidoreductase subunit 3 (mitochondrion)
[Porphyra yamadae]
Length = 129
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 52 LGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+ RPLSPHLTIY Q +S++SI HR +GV +
Sbjct: 4 INRPLSPHLTIYNPQRSSLISIWHRISGVTI 34
>gi|378786323|dbj|BAL63253.1| succinate:cytochrome c oxidoreductase subunit 3 (mitochondrion)
[Pyropia lacerata]
Length = 129
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+ RP+SPHLTIY Q +S+ SI HR +G +
Sbjct: 2 HNINRPISPHLTIYTPQTSSIFSIWHRISGFVM 34
>gi|56695273|ref|YP_165621.1| succinate dehydrogenase, cytochrome b556 subunit [Ruegeria
pomeroyi DSS-3]
gi|56677010|gb|AAV93676.1| succinate dehydrogenase, cytochrome b556 subunit [Ruegeria
pomeroyi DSS-3]
Length = 128
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 26/38 (68%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYAL 87
R RPLSPHL+IY+ Q+TS+ SI R TG AL AL
Sbjct: 5 NRGNRPLSPHLSIYRPQLTSITSILTRITGNALLFAAL 42
>gi|269959019|ref|YP_003328808.1| succinate dehydrogenase cytochrome B-556 subunit [Anaplasma
centrale str. Israel]
gi|269848850|gb|ACZ49494.1| succinate dehydrogenase cytochrome B-556 subunit [Anaplasma
centrale str. Israel]
Length = 127
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 20/26 (76%)
Query: 53 GRPLSPHLTIYKLQITSVLSITHRGT 78
RPLSPHL IY+L + + LSITHR +
Sbjct: 5 SRPLSPHLQIYRLPVAAWLSITHRAS 30
>gi|13473609|ref|NP_105177.1| succinate dehydrogenase membrane anchor subunit [Mesorhizobium
loti MAFF303099]
gi|14024359|dbj|BAB50963.1| succinate dehydrogenase membrane anchor subunit [Mesorhizobium
loti MAFF303099]
Length = 139
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 23/32 (71%)
Query: 51 RLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
R RPLSPHLTIY+ IT +SI HR TG AL
Sbjct: 12 RRERPLSPHLTIYRPPITMTMSIIHRITGGAL 43
>gi|452750996|ref|ZP_21950743.1| Succinate dehydrogenase cytochrome b-556 subunit [alpha
proteobacterium JLT2015]
gi|451962190|gb|EMD84599.1| Succinate dehydrogenase cytochrome b-556 subunit [alpha
proteobacterium JLT2015]
Length = 130
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 27/36 (75%), Gaps = 2/36 (5%)
Query: 54 RPLSPHLTIYKLQITSVLSITHR--GTGVALTAYAL 87
RPLSPHL+I++ ++ ++ SITHR G G+A+ AL
Sbjct: 8 RPLSPHLSIWRWRVHAITSITHRITGNGMAIVGGAL 43
>gi|332559447|ref|ZP_08413769.1| succinate dehydrogenase cytochrome b556 subunit [Rhodobacter
sphaeroides WS8N]
gi|332277159|gb|EGJ22474.1| succinate dehydrogenase cytochrome b556 subunit [Rhodobacter
sphaeroides WS8N]
Length = 127
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 23/32 (71%)
Query: 48 RNERLGRPLSPHLTIYKLQITSVLSITHRGTG 79
+R+ RPLSPHL IY++Q+TS SI R TG
Sbjct: 3 ETKRVERPLSPHLQIYRVQLTSTTSIFTRLTG 34
>gi|77464554|ref|YP_354058.1| succinate dehydrogenase subunit C [Rhodobacter sphaeroides 2.4.1]
gi|126463394|ref|YP_001044508.1| succinate dehydrogenase, cytochrome b subunit [Rhodobacter
sphaeroides ATCC 17029]
gi|221640465|ref|YP_002526727.1| Succinate dehydrogenase subunit C [Rhodobacter sphaeroides KD131]
gi|429207112|ref|ZP_19198371.1| Succinate dehydrogenase cytochrome b-556 subunit [Rhodobacter sp.
AKP1]
gi|77388972|gb|ABA80157.1| succinate dehydrogenase subunit C [Rhodobacter sphaeroides 2.4.1]
gi|126105058|gb|ABN77736.1| succinate dehydrogenase subunit C [Rhodobacter sphaeroides ATCC
17029]
gi|221161246|gb|ACM02226.1| Succinate dehydrogenase subunit C [Rhodobacter sphaeroides KD131]
gi|428189487|gb|EKX58040.1| Succinate dehydrogenase cytochrome b-556 subunit [Rhodobacter sp.
AKP1]
Length = 127
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 23/32 (71%)
Query: 48 RNERLGRPLSPHLTIYKLQITSVLSITHRGTG 79
+R+ RPLSPHL IY++Q+TS SI R TG
Sbjct: 3 ETKRVERPLSPHLQIYRVQLTSTTSIFTRLTG 34
>gi|444309284|ref|ZP_21144923.1| succinate dehydrogenase, cytochrome b556 subunit [Ochrobactrum
intermedium M86]
gi|443487342|gb|ELT50105.1| succinate dehydrogenase, cytochrome b556 subunit [Ochrobactrum
intermedium M86]
Length = 132
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 22/29 (75%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL+IYK IT +SI HR TG AL
Sbjct: 10 RPLSPHLSIYKPVITMTMSIVHRITGGAL 38
>gi|238598805|ref|XP_002394705.1| hypothetical protein MPER_05360 [Moniliophthora perniciosa FA553]
gi|215464172|gb|EEB95635.1| hypothetical protein MPER_05360 [Moniliophthora perniciosa FA553]
Length = 210
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 10/68 (14%)
Query: 25 IRTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
++T ++KP A + +RL +P PH TIY+ Q+T + SI + TG AL+A
Sbjct: 55 VQTQSLKPEATT--------ENLNKQRLNQPSGPHFTIYQPQLTWLWSIANCVTGAALSA 106
Query: 85 --YALGLA 90
Y LA
Sbjct: 107 LLYGFSLA 114
>gi|395788065|ref|ZP_10467641.1| succinate dehydrogenase, cytochrome b556 subunit [Bartonella
birtlesii LL-WM9]
gi|395409847|gb|EJF76432.1| succinate dehydrogenase, cytochrome b556 subunit [Bartonella
birtlesii LL-WM9]
Length = 157
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RP SPH++IY+ IT +SI HR TG+AL
Sbjct: 34 RPRSPHISIYRWTITMAMSIAHRLTGMAL 62
>gi|146276143|ref|YP_001166302.1| succinate dehydrogenase, cytochrome b subunit [Rhodobacter
sphaeroides ATCC 17025]
gi|145554384|gb|ABP68997.1| succinate dehydrogenase subunit C [Rhodobacter sphaeroides ATCC
17025]
Length = 127
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 48 RNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+R+ RPLSPHL IY++Q+TS SI R TG L
Sbjct: 3 ETKRVERPLSPHLQIYRVQLTSTTSIFTRITGNGL 37
>gi|182679666|ref|YP_001833812.1| succinate dehydrogenase, cytochrome b556 subunit [Beijerinckia
indica subsp. indica ATCC 9039]
gi|182635549|gb|ACB96323.1| succinate dehydrogenase, cytochrome b556 subunit [Beijerinckia
indica subsp. indica ATCC 9039]
Length = 137
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IY+ +T ++SI HR TG AL
Sbjct: 15 RPLSPHLLIYRPMLTMMMSIVHRITGAAL 43
>gi|449298247|gb|EMC94264.1| hypothetical protein BAUCODRAFT_36733 [Baudoinia compniacensis
UAMH 10762]
Length = 186
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 49 NERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
+RL RP+SPHL+IY+ QIT SI +R TG L+
Sbjct: 59 KQRLSRPVSPHLSIYRPQITWYGSILNRITGSILS 93
>gi|154293035|ref|XP_001547075.1| succinate dehydrogenase cytochrome b subunit [Botryotinia
fuckeliana B05.10]
gi|254839123|gb|ACT83440.1| SdhC [Botryotinia fuckeliana]
gi|254839125|gb|ACT83441.1| SdhC [Botryotinia fuckeliana]
Length = 189
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 27 TITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA-- 84
++ +PVA P + + +R RP++PHLTIY+ QI ++S +R TG L+
Sbjct: 39 SMQTRPVATQKLTPKDSYNILVEQRKLRPVAPHLTIYQPQIPWIMSGLNRITGCILSGGF 98
Query: 85 YALGLAGV-----GLTTDINSVVPTY 105
Y G A + G D S+V +
Sbjct: 99 YVFGAAYLASPLFGWHLDTASMVAAF 124
>gi|395785155|ref|ZP_10464888.1| succinate dehydrogenase, cytochrome b556 subunit [Bartonella
tamiae Th239]
gi|423717945|ref|ZP_17692135.1| succinate dehydrogenase, cytochrome b556 subunit [Bartonella
tamiae Th307]
gi|395425342|gb|EJF91511.1| succinate dehydrogenase, cytochrome b556 subunit [Bartonella
tamiae Th239]
gi|395426378|gb|EJF92505.1| succinate dehydrogenase, cytochrome b556 subunit [Bartonella
tamiae Th307]
Length = 133
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 26/41 (63%)
Query: 51 RLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAG 91
R RPLSPH++IY+ IT +SI HR +G AL L LA
Sbjct: 7 RKDRPLSPHVSIYRWPITMAMSIAHRVSGGALYFGTLFLAA 47
>gi|384262921|ref|YP_005418109.1| Succinate dehydrogenase subunit C [Rhodospirillum photometricum
DSM 122]
gi|378404023|emb|CCG09139.1| Succinate dehydrogenase subunit C [Rhodospirillum photometricum
DSM 122]
Length = 168
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 4/45 (8%)
Query: 40 PSKEGHAVRNERLGRPLSPHLTIYKL--QITSVLSITHRGTGVAL 82
P+ E A++ RPLSPHL +YKL ++TS+LSIT R G L
Sbjct: 31 PAHEADAMKTHP--RPLSPHLQVYKLHTKVTSMLSITFRVFGAVL 73
>gi|126734839|ref|ZP_01750585.1| succinate dehydrogenase, cytochrome b556 subunit [Roseobacter sp.
CCS2]
gi|126715394|gb|EBA12259.1| succinate dehydrogenase, cytochrome b556 subunit [Roseobacter sp.
CCS2]
Length = 127
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 25/38 (65%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYAL 87
R RPLSPHLTIY+ Q TS+ SI R TG AL AL
Sbjct: 5 NRGNRPLSPHLTIYRPQWTSMSSILVRITGNALIVAAL 42
>gi|339244711|ref|XP_003378281.1| putative succinate dehydrogenase, cytochrome b556 subunit
[Trichinella spiralis]
gi|316972827|gb|EFV56474.1| putative succinate dehydrogenase, cytochrome b556 subunit
[Trichinella spiralis]
Length = 185
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 49 NERLGRPLSPHLTIYKLQITSVLSITHR------GTGVALTAYALGLAGVGLTTDINSV 101
+ L RPLSPHLT+YK +T ++S HR GT VAL + L A TT I +
Sbjct: 58 QKNLKRPLSPHLTVYKPMLTWMVSGLHRISGVVMGTTVALFSIGLMAAPFDFTTLIEYI 116
>gi|323304156|gb|EGA57933.1| Sdh3p [Saccharomyces cerevisiae FostersB]
Length = 198
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 30 IKPVAAP--TGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHR 76
+K VA+ T E + +R RP+SPHLTIY+ Q+T LS HR
Sbjct: 49 LKNVASEMNTKAAIAEEQILNKQRAKRPISPHLTIYQPQLTWYLSSXHR 97
>gi|365759738|gb|EHN01512.1| Sdh3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii
VIN7]
gi|401838958|gb|EJT42355.1| SDH3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 198
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 25 IRTITIKPVAAP--TGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHR 76
+ T ++K +A T E + +R RP+SPHLTIY+ Q+T LS HR
Sbjct: 44 LYTSSLKNIATEMNTKAAIAEEQVLNKQRAKRPISPHLTIYQPQLTWYLSSLHR 97
>gi|346683374|ref|YP_004849336.1| succinate dehydrogenase subunit 3 [Cucumis sativus]
gi|325305594|gb|ADZ10763.1| succinate dehydrogenase subunit 3 [Cucumis sativus]
Length = 105
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYK Q+TS I+HR +G L
Sbjct: 5 RPLSPHLPIYKAQLTSTFPISHRISGAFL 33
>gi|115443883|ref|NP_001045721.1| Os02g0121800 [Oryza sativa Japonica Group]
gi|14861488|gb|AAK73694.1| succinate dehydrogenase subunit 3 [Oryza sativa]
gi|41052751|dbj|BAD07607.1| succinate dehydrogenase subunit 3 [Oryza sativa Japonica Group]
gi|113535252|dbj|BAF07635.1| Os02g0121800 [Oryza sativa Japonica Group]
gi|215737053|dbj|BAG95982.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222622073|gb|EEE56205.1| hypothetical protein OsJ_05172 [Oryza sativa Japonica Group]
Length = 129
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 29 TIKPVAAPTGV-PSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
++P P+G P H + RPLSPHL + K Q+++ SI+HR G AL A
Sbjct: 56 AVRPKMLPSGCRPLHTSHPLSAPVANRPLSPHLPLKKPQLSATFSISHRIFGAALGA 112
>gi|323138215|ref|ZP_08073287.1| succinate dehydrogenase, cytochrome b556 subunit [Methylocystis
sp. ATCC 49242]
gi|322396467|gb|EFX98996.1| succinate dehydrogenase, cytochrome b556 subunit [Methylocystis
sp. ATCC 49242]
Length = 135
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL++YK +T ++SI HR TG L
Sbjct: 13 RPLSPHLSVYKPMLTMMMSIAHRITGAGL 41
>gi|319406315|emb|CBI79952.1| SdhC succinate dehydrogenase cytochrome b-556 subunit [Bartonella
sp. AR 15-3]
Length = 133
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL----TAYALGLAGVGLTTDINSVV 102
RP SPHL++Y+ IT +SI HR TG+ L AL L + D +V
Sbjct: 10 RPRSPHLSVYRWSITMAISIAHRITGIVLYFGMCFLALWLVSIACGADTFKMV 62
>gi|357471271|ref|XP_003605920.1| Succinate dehydrogenase subunit [Medicago truncatula]
gi|355506975|gb|AES88117.1| Succinate dehydrogenase subunit [Medicago truncatula]
gi|388502196|gb|AFK39164.1| unknown [Medicago truncatula]
Length = 245
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 13/70 (18%)
Query: 37 TGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYAL--------- 87
+ +PSK A ++ RPLSPHL +Y+ Q++S LSI +R G L A L
Sbjct: 143 SDIPSKTSEAKQSGF--RPLSPHLPVYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMKV 200
Query: 88 GLAGVGLTTD 97
GL VGLT D
Sbjct: 201 GL--VGLTFD 208
>gi|340779270|ref|ZP_08699213.1| succinate dehydrogenase, cytochrome b556 subunit [Acetobacter
aceti NBRC 14818]
Length = 158
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
RP+SPHL +YK++++ LSI++R TGV T
Sbjct: 21 RPMSPHLQVYKMRLSMFLSISNRITGVVATG 51
>gi|328860072|gb|EGG09179.1| hypothetical protein MELLADRAFT_77220 [Melampsora larici-populina
98AG31]
Length = 186
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 47 VRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA--YALGLAGVGL 94
+ +R RP SPH TIY+ Q+T + SI +R +G AL+ Y L+ +GL
Sbjct: 57 LNQQRKLRPTSPHFTIYEPQLTWLSSIANRVSGSALSVGLYVFALSYMGL 106
>gi|85706758|ref|ZP_01037850.1| Succinate dehydrogenase cytochrome b-556 subunit [Roseovarius sp.
217]
gi|85668816|gb|EAQ23685.1| Succinate dehydrogenase cytochrome b-556 subunit [Roseovarius sp.
217]
Length = 127
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 26/39 (66%)
Query: 48 RNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYA 86
+++ RPLSPHL IY+ Q+TS+ SI R TG AL A
Sbjct: 3 ETKQVERPLSPHLQIYRPQLTSITSILTRITGNALVVAA 41
>gi|396497543|ref|XP_003845003.1| similar to succinate dehydrogenase cytochrome b560 subunit
[Leptosphaeria maculans JN3]
gi|312221584|emb|CBY01524.1| similar to succinate dehydrogenase cytochrome b560 subunit
[Leptosphaeria maculans JN3]
Length = 174
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 25 IRTITIKPVAAPTGVPSKEGHAV-RNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT 83
+R++ + +AA + A+ +R RP+SPHL+IYK QIT S +R T +AL+
Sbjct: 21 VRSVAQRRLAATHNTSHNDAAALLAKQRTRRPVSPHLSIYKPQITWYGSALNRVTAIALS 80
Query: 84 A--YALGLA 90
Y G+A
Sbjct: 81 GSLYLFGIA 89
>gi|254477708|ref|ZP_05091094.1| succinate dehydrogenase, cytochrome b556 subunit [Ruegeria sp.
R11]
gi|214031951|gb|EEB72786.1| succinate dehydrogenase, cytochrome b556 subunit [Ruegeria sp.
R11]
Length = 127
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 23/32 (71%)
Query: 51 RLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
R RPLSPHL IY+ Q+TS SI R TG+A+
Sbjct: 6 RGNRPLSPHLQIYRPQLTSASSIFVRATGIAI 37
>gi|334345340|ref|YP_004553892.1| succinate dehydrogenase cytochrome b556 subunit [Sphingobium
chlorophenolicum L-1]
gi|334101962|gb|AEG49386.1| succinate dehydrogenase, cytochrome b556 subunit [Sphingobium
chlorophenolicum L-1]
Length = 131
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL-TAYALGL 89
RPLSPHLTI+K +SI HR TG L TA ALGL
Sbjct: 7 RPLSPHLTIWKWGPAMAVSIMHRVTGNGLATAGALGL 43
>gi|401624907|gb|EJS42944.1| sdh3p [Saccharomyces arboricola H-6]
Length = 198
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 43 EGHAVRNERLGRPLSPHLTIYKLQITSVLSITHR 76
E + +R RP+SPHLTIY+ Q+T LS HR
Sbjct: 64 EEQVLNEQRAKRPISPHLTIYQPQLTWYLSSLHR 97
>gi|319404830|emb|CBI78431.1| SdhC succinate dehydrogenase cytochrome b-556 subunit [Bartonella
rochalimae ATCC BAA-1498]
Length = 152
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RP SPHL++Y+ IT +SI HR TG+ L
Sbjct: 29 RPRSPHLSVYRWSITMAISIAHRITGIVL 57
>gi|340377138|ref|XP_003387087.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like [Amphimedon queenslandica]
Length = 186
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 28/38 (73%), Gaps = 2/38 (5%)
Query: 48 RNERLGRPLSPHLTIY--KLQITSVLSITHRGTGVALT 83
RN+ L RP+SPHL+I Q+ ++LSI+HR TGV L+
Sbjct: 55 RNKELNRPISPHLSILLSNPQLPAMLSISHRITGVILS 92
>gi|114798487|ref|YP_761916.1| succinate dehydrogenase, cytochrome b556 subunit [Hyphomonas
neptunium ATCC 15444]
gi|114738661|gb|ABI76786.1| succinate dehydrogenase, cytochrome b556 subunit [Hyphomonas
neptunium ATCC 15444]
Length = 132
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 23/29 (79%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPH+ I++ I+++ SITHR TG AL
Sbjct: 10 RPLSPHIQIWRWHISALASITHRITGGAL 38
>gi|149201370|ref|ZP_01878345.1| Succinate dehydrogenase cytochrome b-556 subunit [Roseovarius sp.
TM1035]
gi|149145703|gb|EDM33729.1| Succinate dehydrogenase cytochrome b-556 subunit [Roseovarius sp.
TM1035]
Length = 127
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 24/34 (70%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYAL 87
RPLSPHL IY+ Q+TS+ SI R TG AL AL
Sbjct: 9 RPLSPHLQIYRPQLTSITSILTRITGNALIVAAL 42
>gi|110678932|ref|YP_681939.1| succinate dehydrogenase, cytochrome b556 subunit [Roseobacter
denitrificans OCh 114]
gi|109455048|gb|ABG31253.1| succinate dehydrogenase, cytochrome b556 subunit [Roseobacter
denitrificans OCh 114]
Length = 127
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 24/33 (72%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
R RPLSPHLTIY+ Q+TS+ SI R TG AL
Sbjct: 5 NRGNRPLSPHLTIYRPQLTSMTSILTRITGNAL 37
>gi|329114746|ref|ZP_08243503.1| Succinate dehydrogenase cytochrome b556 subunit [Acetobacter
pomorum DM001]
gi|326695877|gb|EGE47561.1| Succinate dehydrogenase cytochrome b556 subunit [Acetobacter
pomorum DM001]
Length = 157
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYA-LGLAGVG 93
RP+SPHL +Y+ +++ VLSI +R TGV TA A LG+ +G
Sbjct: 21 RPMSPHLQVYRYRLSMVLSIMNRITGVIATAGATLGVFWLG 61
>gi|258541135|ref|YP_003186568.1| succinate dehydrogenase cytochrome b subunit [Acetobacter
pasteurianus IFO 3283-01]
gi|384041056|ref|YP_005479800.1| succinate dehydrogenase cytochrome b subunit [Acetobacter
pasteurianus IFO 3283-12]
gi|384049571|ref|YP_005476634.1| succinate dehydrogenase cytochrome b subunit [Acetobacter
pasteurianus IFO 3283-03]
gi|384052681|ref|YP_005485775.1| succinate dehydrogenase cytochrome b subunit [Acetobacter
pasteurianus IFO 3283-07]
gi|384055913|ref|YP_005488580.1| succinate dehydrogenase cytochrome b subunit [Acetobacter
pasteurianus IFO 3283-22]
gi|384058554|ref|YP_005497682.1| succinate dehydrogenase cytochrome b subunit [Acetobacter
pasteurianus IFO 3283-26]
gi|384061848|ref|YP_005482490.1| succinate dehydrogenase cytochrome b subunit [Acetobacter
pasteurianus IFO 3283-32]
gi|384117924|ref|YP_005500548.1| succinate dehydrogenase cytochrome b subunit [Acetobacter
pasteurianus IFO 3283-01-42C]
gi|256632213|dbj|BAH98188.1| succinate dehydrogenase cytochrome b subunit [Acetobacter
pasteurianus IFO 3283-01]
gi|256635270|dbj|BAI01239.1| succinate dehydrogenase cytochrome b subunit [Acetobacter
pasteurianus IFO 3283-03]
gi|256638325|dbj|BAI04287.1| succinate dehydrogenase cytochrome b subunit [Acetobacter
pasteurianus IFO 3283-07]
gi|256641379|dbj|BAI07334.1| succinate dehydrogenase cytochrome b subunit [Acetobacter
pasteurianus IFO 3283-22]
gi|256644434|dbj|BAI10382.1| succinate dehydrogenase cytochrome b subunit [Acetobacter
pasteurianus IFO 3283-26]
gi|256647489|dbj|BAI13430.1| succinate dehydrogenase cytochrome b subunit [Acetobacter
pasteurianus IFO 3283-32]
gi|256650542|dbj|BAI16476.1| succinate dehydrogenase cytochrome b subunit [Acetobacter
pasteurianus IFO 3283-01-42C]
gi|256653533|dbj|BAI19460.1| succinate dehydrogenase cytochrome b subunit [Acetobacter
pasteurianus IFO 3283-12]
Length = 157
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYA-LGLAGVG 93
RP+SPHL +Y+ +++ VLSI +R TGV TA A LG+ +G
Sbjct: 21 RPMSPHLQVYRYRLSMVLSIMNRITGVIATAGATLGVFWLG 61
>gi|345034416|gb|AEN56102.1| succinate dehydrogenase subunit 3 [Cucumis melo subsp. melo]
Length = 100
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYK Q+TS I+HR +G L
Sbjct: 5 RPLSPHLPIYKAQLTSTFPISHRISGAFL 33
>gi|319407790|emb|CBI81441.1| SdhC succinate dehydrogenase cytochrome b-556 subunit [Bartonella
sp. 1-1C]
Length = 152
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RP SPHL++Y+ IT +SI HR TG+ L
Sbjct: 29 RPRSPHLSVYRWSITMAISIAHRITGIVL 57
>gi|217979669|ref|YP_002363816.1| succinate dehydrogenase, cytochrome b556 subunit [Methylocella
silvestris BL2]
gi|217505045|gb|ACK52454.1| succinate dehydrogenase, cytochrome b556 subunit [Methylocella
silvestris BL2]
Length = 131
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IY+ +T ++SI HR TG AL
Sbjct: 9 RPLSPHLQIYRPTLTMMMSIVHRITGAAL 37
>gi|114769286|ref|ZP_01446912.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodobacterales
bacterium HTCC2255]
gi|114550203|gb|EAU53084.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodobacterales
bacterium HTCC2255]
Length = 131
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 27/36 (75%), Gaps = 3/36 (8%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGL 89
RPLSPHLTIY+ Q++S+ SI R TGV+L ALG
Sbjct: 9 RPLSPHLTIYRPQMSSISSILVRITGVSL---ALGF 41
>gi|378786311|dbj|BAL63245.1| succinate: cytochrome c oxidoreductase subunit 3 (mitochondrion)
[Porphyra tenuipedalis]
Length = 129
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+ +P+SPHLTIY Q +S+ SI HR +GV +
Sbjct: 2 HNINKPISPHLTIYNPQRSSIFSIWHRISGVVM 34
>gi|242792819|ref|XP_002482034.1| succinate dehydrogenase cytochrome b560 subunit [Talaromyces
stipitatus ATCC 10500]
gi|218718622|gb|EED18042.1| succinate dehydrogenase cytochrome b560 subunit [Talaromyces
stipitatus ATCC 10500]
Length = 188
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 49 NERLGRPLSPHLTIYKLQITSVLSITHRGTG 79
+RL RP+SPHL+IY+ QIT S HR TG
Sbjct: 61 QQRLKRPVSPHLSIYRPQITWYASGLHRITG 91
>gi|151941666|gb|EDN60028.1| succinate dehydrogenase cytochrome b [Saccharomyces cerevisiae
YJM789]
Length = 198
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 30 IKPVAAP--TGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHR 76
+K VA+ T E + +R RP+SPHLTIY+ Q+T LS HR
Sbjct: 49 LKNVASEMNTKAAIAEEQILNKQRAKRPISPHLTIYQPQLTWYLSSFHR 97
>gi|357025757|ref|ZP_09087870.1| succinate dehydrogenase membrane anchor subunit [Mesorhizobium
amorphae CCNWGS0123]
gi|355542355|gb|EHH11518.1| succinate dehydrogenase membrane anchor subunit [Mesorhizobium
amorphae CCNWGS0123]
Length = 139
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 23/32 (71%)
Query: 51 RLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
R RPLSPHLT+Y+ IT +SI HR TG AL
Sbjct: 12 RRERPLSPHLTVYRPPITMTMSIIHRITGGAL 43
>gi|190409697|gb|EDV12962.1| succinate dehydrogenase cytochrome b [Saccharomyces cerevisiae
RM11-1a]
gi|259147700|emb|CAY80950.1| Sdh3p [Saccharomyces cerevisiae EC1118]
Length = 198
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 30 IKPVAAP--TGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHR 76
+K VA+ T E + +R RP+SPHLTIY+ Q+T LS HR
Sbjct: 49 LKNVASEMNTKAAIAEEQILNKQRAKRPISPHLTIYQPQLTWYLSSFHR 97
>gi|90421134|ref|ZP_01229036.1| succinate dehydrogenase, cytochrome b subunit [Aurantimonas
manganoxydans SI85-9A1]
gi|90334626|gb|EAS48406.1| succinate dehydrogenase, cytochrome b subunit [Aurantimonas
manganoxydans SI85-9A1]
Length = 130
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 49 NERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+ + RPLSPHL+IY+ + T +SI HR TG AL
Sbjct: 3 DLKTARPLSPHLSIYRFRPTMAMSILHRITGSAL 36
>gi|349579428|dbj|GAA24590.1| K7_Sdh3p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 198
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 30 IKPVAAP--TGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHR 76
+K VA+ T E + +R RP+SPHLTIY+ Q+T LS HR
Sbjct: 49 LKNVASEMNTKAAIAEEQILNKQRAKRPISPHLTIYQPQLTWYLSSFHR 97
>gi|401841443|gb|EJT43831.1| SHH3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 196
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 43 EGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGV--ALTAYAL 87
E + ++R RP+SPHLTIY+ +++ LS HR +GV AL YA
Sbjct: 62 EEELLVSQRKQRPISPHLTIYEPEMSWYLSSLHRISGVLLALAFYAF 108
>gi|323332726|gb|EGA74131.1| Sdh3p [Saccharomyces cerevisiae AWRI796]
Length = 194
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 30 IKPVAAP--TGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHR 76
+K VA+ T E + +R RP+SPHLTIY+ Q+T LS HR
Sbjct: 45 LKNVASEMNTKAAIAEEQILNKQRAKRPISPHLTIYQPQLTWYLSSFHR 93
>gi|323308340|gb|EGA61586.1| Sdh3p [Saccharomyces cerevisiae FostersO]
Length = 194
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 30 IKPVAAP--TGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHR 76
+K VA+ T E + +R RP+SPHLTIY+ Q+T LS HR
Sbjct: 45 LKNVASEMNTKAAIAEEQILNKQRAKRPISPHLTIYQPQLTWYLSSFHR 93
>gi|365759027|gb|EHN00841.1| YMR118C-like protein [Saccharomyces cerevisiae x Saccharomyces
kudriavzevii VIN7]
Length = 196
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 43 EGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGV--ALTAYAL 87
E + ++R RP+SPHLTIY+ +++ LS HR +GV AL YA
Sbjct: 62 EEELLVSQRKQRPISPHLTIYEPEMSWYLSSLHRISGVLLALAFYAF 108
>gi|357122852|ref|XP_003563128.1| PREDICTED: uncharacterized protein LOC100828671 [Brachypodium
distachyon]
Length = 129
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
RPLSPHL + K Q+++ SI+HR GVAL A
Sbjct: 82 RPLSPHLPLKKPQLSATFSISHRIFGVALGA 112
>gi|357122622|ref|XP_003563014.1| PREDICTED: uncharacterized protein LOC100845567 [Brachypodium
distachyon]
Length = 129
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 14/56 (25%)
Query: 29 TIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
T +P+AAP RPLSPHL + K Q+++ SI+HR GVAL A
Sbjct: 71 TSRPLAAPVA--------------NRPLSPHLPLKKPQLSATFSISHRIFGVALGA 112
>gi|207343604|gb|EDZ71023.1| YKL141Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 198
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 30 IKPVAAP--TGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHR 76
+K VA+ T E + +R RP+SPHLTIY+ Q+T LS HR
Sbjct: 49 LKNVASEMNTKAAIAEEQILNKQRAKRPISPHLTIYQPQLTWYLSSFHR 97
>gi|6322708|ref|NP_012781.1| succinate dehydrogenase cytochrome b subunit SDH3 [Saccharomyces
cerevisiae S288c]
gi|464750|sp|P33421.1|SDH3_YEAST RecName: Full=Succinate dehydrogenase [ubiquinone] cytochrome b
subunit, mitochondrial; Flags: Precursor
gi|396438|emb|CAA80957.1| succinate dehydrogenase cytochrome b subunit [Saccharomyces
cerevisiae]
gi|486241|emb|CAA81982.1| SDH3 [Saccharomyces cerevisiae]
gi|51013499|gb|AAT93043.1| YKL141W [Saccharomyces cerevisiae]
gi|285813124|tpg|DAA09021.1| TPA: succinate dehydrogenase cytochrome b subunit SDH3
[Saccharomyces cerevisiae S288c]
gi|392298298|gb|EIW09396.1| Sdh3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 198
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 30 IKPVAAP--TGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHR 76
+K VA+ T E + +R RP+SPHLTIY+ Q+T LS HR
Sbjct: 49 LKNVASEMNTKAAIAEEQILNKQRAKRPISPHLTIYQPQLTWYLSSLHR 97
>gi|389809772|ref|ZP_10205469.1| succinate dehydrogenase, cytochrome b subunit [Rhodanobacter
thiooxydans LCS2]
gi|388441487|gb|EIL97756.1| succinate dehydrogenase, cytochrome b subunit [Rhodanobacter
thiooxydans LCS2]
Length = 130
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALT 83
RP SP + IY+ Q+TSVLSI HR TGV L+
Sbjct: 7 RPRSPDIQIYRPQLTSVLSILHRITGVLLS 36
>gi|313814|emb|CAA52088.1| succinate dehydrogenase cytochrome b subunit [Saccharomyces
cerevisiae]
Length = 198
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 30 IKPVAAP--TGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHR 76
+K VA+ T E + +R RP+SPHLTIY+ Q+T LS HR
Sbjct: 49 LKNVASEMNTKAAIAEEQILNKQRAKRPISPHLTIYQPQLTWYLSSLHR 97
>gi|163744267|ref|ZP_02151627.1| succinate dehydrogenase, cytochrome b556 subunit [Oceanibulbus
indolifex HEL-45]
gi|161381085|gb|EDQ05494.1| succinate dehydrogenase, cytochrome b556 subunit [Oceanibulbus
indolifex HEL-45]
Length = 127
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYAL 87
R RPLSPH+TIY+ Q+TS+ SI R TG A+ AL
Sbjct: 5 NRGNRPLSPHMTIYRPQLTSMTSILTRITGNAMLITAL 42
>gi|402773782|ref|YP_006593319.1| succinate dehydrogenase, cytochrome b556 subunit [Methylocystis
sp. SC2]
gi|401775802|emb|CCJ08668.1| Succinate dehydrogenase, cytochrome b556 subunit [Methylocystis
sp. SC2]
Length = 135
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHLTI+K +T ++SI HR TG L
Sbjct: 13 RPLSPHLTIFKPILTMMMSIAHRITGAGL 41
>gi|363754177|ref|XP_003647304.1| hypothetical protein Ecym_6091 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890941|gb|AET40487.1| hypothetical protein Ecym_6091 [Eremothecium cymbalariae
DBVPG#7215]
Length = 168
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 14/70 (20%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGV--ALTAYALGLA-------GVGLTTD--- 97
+R RP+SPHLTI++ Q+T LS HR +GV YA+ +A +GLTT+
Sbjct: 41 QRRNRPVSPHLTIFQPQLTWYLSSLHRISGVLMGFGFYAVTIAFGFSSLLDLGLTTEQLT 100
Query: 98 --INSVVPTY 105
++ VPT+
Sbjct: 101 EWYHNKVPTW 110
>gi|451855678|gb|EMD68969.1| hypothetical protein COCSADRAFT_340668 [Cochliobolus sativus
ND90Pr]
Length = 172
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA--YALGLA 90
+ + +R+ RP+SP+L+IYK QI SV S R TG+ L+ Y G A
Sbjct: 36 DQAARIIAEQRIRRPVSPNLSIYKPQINSVTSTLQRITGLTLSGSLYLFGTA 87
>gi|315122380|ref|YP_004062869.1| succinate dehydrogenase protein, cytochrome b subunit [Candidatus
Liberibacter solanacearum CLso-ZC1]
gi|313495782|gb|ADR52381.1| succinate dehydrogenase protein, cytochrome b subunit [Candidatus
Liberibacter solanacearum CLso-ZC1]
Length = 129
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 22/29 (75%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYKL T ++SI HR TG A+
Sbjct: 8 RPLSPHLQIYKLIPTMLISIVHRITGSAV 36
>gi|304394275|ref|ZP_07376198.1| succinate dehydrogenase, cytochrome b556 subunit [Ahrensia sp.
R2A130]
gi|303293715|gb|EFL88092.1| succinate dehydrogenase, cytochrome b556 subunit [Ahrensia sp.
R2A130]
Length = 138
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYK T V+SI HR TG AL
Sbjct: 14 RPLSPHLEIYKPIPTMVMSILHRVTGAAL 42
>gi|395326745|gb|EJF59151.1| hypothetical protein DICSQDRAFT_172301 [Dichomitus squalens
LYAD-421 SS1]
Length = 247
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 29/55 (52%)
Query: 40 PSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGL 94
PS + +RL RP SP LTIY+ Q+T V SI R TG L G A V L
Sbjct: 114 PSAHQEILNGQRLRRPKSPVLTIYQPQLTWVGSILSRFTGTGLAVLLYGSALVYL 168
>gi|89053302|ref|YP_508753.1| succinate dehydrogenase subunit C [Jannaschia sp. CCS1]
gi|88862851|gb|ABD53728.1| succinate dehydrogenase subunit C [Jannaschia sp. CCS1]
Length = 127
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 23/33 (69%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
R RPLSPHLTIYK Q+ S+ SI R TG A+
Sbjct: 5 NRGNRPLSPHLTIYKPQLNSITSILVRITGNAM 37
>gi|126725053|ref|ZP_01740896.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodobacterales
bacterium HTCC2150]
gi|126706217|gb|EBA05307.1| succinate dehydrogenase, cytochrome b556 subunit
[Rhodobacteraceae bacterium HTCC2150]
Length = 139
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 25/34 (73%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYAL 87
RPLSPHLTIY+ Q+TS+ SI R TG A+ AL
Sbjct: 21 RPLSPHLTIYRPQLTSMTSIFTRITGNAMLLAAL 54
>gi|256269924|gb|EEU05182.1| Sdh3p [Saccharomyces cerevisiae JAY291]
Length = 198
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 30 IKPVAAP--TGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHR 76
+K VA+ T E + +R RP+SPHLTIY+ Q+T LS HR
Sbjct: 49 LKNVASEMNTKAAIAEEQILNKQRARRPISPHLTIYQPQLTWYLSSFHR 97
>gi|84515883|ref|ZP_01003244.1| succinate dehydrogenase, cytochrome b556 subunit [Loktanella
vestfoldensis SKA53]
gi|84510325|gb|EAQ06781.1| succinate dehydrogenase, cytochrome b556 subunit [Loktanella
vestfoldensis SKA53]
Length = 127
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 23/33 (69%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
R RPLSPHLTIY+ Q TS+ SI R TG AL
Sbjct: 5 NRGNRPLSPHLTIYRPQWTSITSILVRITGNAL 37
>gi|326490269|dbj|BAJ84798.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 129
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
RPLSPHL + K Q+++ SI+HR GVAL A
Sbjct: 82 RPLSPHLPLKKPQLSATFSISHRIFGVALGA 112
>gi|390168494|ref|ZP_10220453.1| succinate dehydrogenase subunit C [Sphingobium indicum B90A]
gi|389588913|gb|EIM66949.1| succinate dehydrogenase subunit C [Sphingobium indicum B90A]
Length = 131
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL-TAYALGL 89
RPLSPHLTI+K +SI HR TG + TA ALGL
Sbjct: 7 RPLSPHLTIWKWGPAMAVSIMHRVTGNGMATAGALGL 43
>gi|71082950|ref|YP_265669.1| succinate dehydrogenase cytochrome b [Candidatus Pelagibacter
ubique HTCC1062]
gi|71062063|gb|AAZ21066.1| Succinate dehydrogenase cytochrome b [Candidatus Pelagibacter
ubique HTCC1062]
Length = 127
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 22/27 (81%)
Query: 55 PLSPHLTIYKLQITSVLSITHRGTGVA 81
PLSPH+ IY+ I+S++SI+HR TG+
Sbjct: 6 PLSPHIQIYRWHISSLVSISHRITGIV 32
>gi|365764541|gb|EHN06063.1| Sdh3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii
VIN7]
Length = 194
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 30 IKPVAAP--TGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHR 76
+K VA+ T E + +R RP+SPHLTIY+ Q+T LS HR
Sbjct: 45 LKNVASEMNTKAAIAEEQILNKQRARRPISPHLTIYQPQLTWYLSSFHR 93
>gi|391348948|ref|YP_006460151.1| succinate dehydrogenase subunit 3 (mitochondrion) [Mimulus
guttatus]
gi|340007673|gb|AEK26537.1| succinate dehydrogenase subunit 3 (mitochondrion) [Mimulus
guttatus]
Length = 111
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYK Q+TS I+HR +G L
Sbjct: 13 RPLSPHLPIYKPQLTSTFPISHRISGAFL 41
>gi|91762626|ref|ZP_01264591.1| Succinate dehydrogenase cytochrome b [Candidatus Pelagibacter
ubique HTCC1002]
gi|91718428|gb|EAS85078.1| Succinate dehydrogenase cytochrome b [Candidatus Pelagibacter
ubique HTCC1002]
Length = 127
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 22/27 (81%)
Query: 55 PLSPHLTIYKLQITSVLSITHRGTGVA 81
PLSPH+ IY+ I+S++SI+HR TG+
Sbjct: 6 PLSPHIQIYRWHISSLVSISHRITGIV 32
>gi|11466582|ref|NP_066472.1| succinate:cytochrome c oxidoreductase subunit 3 [Rhodomonas
salina]
gi|10444169|gb|AAG17743.1|AF288090_19 succinate:cytochrome c oxidoreductase subunit 3 [Rhodomonas
salina]
Length = 128
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 54 RPLSPHLTIYKLQITSVLSITHR-GTGVALTAYALGL 89
RPL+PHL +YK Q+TS+ SI HR G+ + + L
Sbjct: 6 RPLAPHLLVYKPQLTSIFSIFHRISAGILFVVFTILL 42
>gi|377806999|ref|YP_005090401.1| sdh3 gene product (mitochondrion) [Boea hygrometrica]
gi|340549504|gb|AEK53325.1| succinate dehydrogenase subunit 3 (mitochondrion) [Boea
hygrometrica]
Length = 150
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYK Q+TS I+HR +G L
Sbjct: 5 RPLSPHLPIYKPQLTSTFPISHRISGAFL 33
>gi|330804873|ref|XP_003290414.1| hypothetical protein DICPUDRAFT_98679 [Dictyostelium purpureum]
gi|325079465|gb|EGC33064.1| hypothetical protein DICPUDRAFT_98679 [Dictyostelium purpureum]
Length = 193
Score = 38.1 bits (87), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 5/54 (9%)
Query: 39 VPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGV 92
+ K+ +R + +P SPH+ IY+ + +V+SI HR TGV L LGL GV
Sbjct: 59 ITEKKAEELRVPK--QPTSPHVLIYRFPLPAVMSILHRVTGVFL---GLGLFGV 107
>gi|254994783|ref|ZP_05276973.1| succinate dehydrogenase cytochrome b556 subunit (sdhC) [Anaplasma
marginale str. Mississippi]
gi|255002908|ref|ZP_05277872.1| succinate dehydrogenase cytochrome b556 subunit (sdhC) [Anaplasma
marginale str. Puerto Rico]
gi|255004036|ref|ZP_05278837.1| succinate dehydrogenase cytochrome b556 subunit (sdhC) [Anaplasma
marginale str. Virginia]
Length = 120
Score = 38.1 bits (87), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 22/27 (81%)
Query: 56 LSPHLTIYKLQITSVLSITHRGTGVAL 82
+SPHL +YKL + ++LSITHR +G+ L
Sbjct: 1 MSPHLQVYKLPVAALLSITHRASGLFL 27
>gi|433772474|ref|YP_007302941.1| succinate dehydrogenase, cytochrome b556 subunit [Mesorhizobium
australicum WSM2073]
gi|433664489|gb|AGB43565.1| succinate dehydrogenase, cytochrome b556 subunit [Mesorhizobium
australicum WSM2073]
Length = 138
Score = 37.7 bits (86), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 49 NERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
R RPLSPHL++Y+ IT +SI HR TG AL
Sbjct: 8 QARRERPLSPHLSVYRPPITMTMSIIHRITGGAL 41
>gi|326519544|dbj|BAK00145.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 118
Score = 37.7 bits (86), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
RPLSPHL + K Q+++ SI+HR GVAL A
Sbjct: 71 RPLSPHLPLKKPQLSATFSISHRIFGVALGA 101
>gi|242075036|ref|XP_002447454.1| hypothetical protein SORBIDRAFT_06g001280 [Sorghum bicolor]
gi|241938637|gb|EES11782.1| hypothetical protein SORBIDRAFT_06g001280 [Sorghum bicolor]
Length = 117
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 33 VAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
++AP P + + RPLSPHL + K Q ++ SI+HR GVAL
Sbjct: 49 ISAPGSRPLHTSRPLSSPVANRPLSPHLPLKKPQFSATFSISHRIFGVAL 98
>gi|224020960|ref|YP_002608193.1| succinate dehydrogenase subunit 3 [Carica papaya]
gi|170522372|gb|ACB20482.1| succinate dehydrogenase subunit 3 (mitochondrion) [Carica papaya]
Length = 108
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYK Q+TS I+HR +G L
Sbjct: 5 RPLSPHLPIYKPQLTSTFPISHRISGAFL 33
>gi|398827913|ref|ZP_10586116.1| succinate dehydrogenase, cytochrome b556 subunit [Phyllobacterium
sp. YR531]
gi|398219211|gb|EJN05708.1| succinate dehydrogenase, cytochrome b556 subunit [Phyllobacterium
sp. YR531]
Length = 132
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 22/34 (64%)
Query: 49 NERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
N RPLSPHL IYK T V+SI HR TG AL
Sbjct: 5 NLHSNRPLSPHLQIYKPIPTMVMSIVHRITGCAL 38
>gi|297183595|gb|ADI19722.1| hypothetical protein [uncultured bacterium EB000_36F02]
Length = 127
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGV----ALTAYALGLA 90
PLSPH+ IY I+S++SI+HR TGV ALT L +
Sbjct: 5 NPLSPHIQIYSWNISSLISISHRITGVINILALTLICLWIV 45
>gi|170094680|ref|XP_001878561.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647015|gb|EDR11260.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 181
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLA 90
S + +RL RP SPH TIY+ Q+T + SI +R TG L+ G +
Sbjct: 48 SAAAEILDKQRLLRPSSPHFTIYQPQLTWLGSIANRVTGSGLSVLLYGFS 97
>gi|323347731|gb|EGA81995.1| Sdh3p [Saccharomyces cerevisiae Lalvin QA23]
Length = 143
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 43 EGHAVRNERLGRPLSPHLTIYKLQITSVLSITHR 76
E + +R RP+SPHLTIY+ Q+T LS HR
Sbjct: 9 EEQILNKQRAXRPISPHLTIYQPQLTWYLSSFHR 42
>gi|389811869|ref|ZP_10206284.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodanobacter
thiooxydans LCS2]
gi|388440025|gb|EIL96453.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodanobacter
thiooxydans LCS2]
Length = 142
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLA 90
RPLSPHL IY+ +I V S HR TG+ L+A L L+
Sbjct: 6 RPLSPHLGIYRWRINMVQSSLHRLTGLLLSAGTLALS 42
>gi|430005419|emb|CCF21220.1| Succinate dehydrogenase cytochrome b556 subunit [Rhizobium sp.]
Length = 139
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 20/29 (68%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL +Y+ T +SI HR TG AL
Sbjct: 17 RPLSPHLQVYRFIPTMAMSIMHRITGAAL 45
>gi|50286141|ref|XP_445499.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524804|emb|CAG58410.1| unnamed protein product [Candida glabrata]
Length = 181
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 8/70 (11%)
Query: 36 PTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHR-------GTGVALTA-YAL 87
+ + ++E + +R RP+SPHLTIY+ Q+T +S HR GT LT + L
Sbjct: 41 KSSMNAEEEALLNKQRALRPISPHLTIYQPQLTWYMSSVHRISHLILGGTFYVLTILFGL 100
Query: 88 GLAGVGLTTD 97
G G+ T+
Sbjct: 101 GYFVSGINTE 110
>gi|148284919|ref|YP_001249009.1| succinate dehydrogenase, cytochrome b556 subunit [Orientia
tsutsugamushi str. Boryong]
gi|146740358|emb|CAM80791.1| succinate dehydrogenase, cytochrome b556 subunit [Orientia
tsutsugamushi str. Boryong]
Length = 116
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 24/27 (88%)
Query: 56 LSPHLTIYKLQITSVLSITHRGTGVAL 82
+SPH+TIY++Q++ +LSI HR +G+A+
Sbjct: 1 MSPHITIYRMQMSMILSILHRLSGMAV 27
>gi|319780753|ref|YP_004140229.1| succinate dehydrogenase cytochrome b556 subunit [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|317166641|gb|ADV10179.1| succinate dehydrogenase, cytochrome b556 subunit [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 139
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 23/32 (71%)
Query: 51 RLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
R RP+SPHLT+Y+ IT +SI HR TG AL
Sbjct: 12 RRERPISPHLTVYRPPITMTMSIIHRITGGAL 43
>gi|159045407|ref|YP_001534201.1| putative succinate dehydrogenase cytochrome subunit B
[Dinoroseobacter shibae DFL 12]
gi|157913167|gb|ABV94600.1| putative succinate dehydrogenase cytochrome b subunit
[Dinoroseobacter shibae DFL 12]
Length = 127
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 25/38 (65%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYAL 87
R RPLSPH+ IY+ Q+TSV SI R TG AL AL
Sbjct: 5 NRGDRPLSPHIQIYRPQLTSVTSILTRITGNALLVGAL 42
>gi|169615981|ref|XP_001801406.1| hypothetical protein SNOG_11157 [Phaeosphaeria nodorum SN15]
gi|111060536|gb|EAT81656.1| hypothetical protein SNOG_11157 [Phaeosphaeria nodorum SN15]
Length = 174
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 43 EGHAVR-NERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA--YALGLA 90
E H + +R+ RP+SPHL+IY+ QIT S +R T V +T Y G A
Sbjct: 39 EAHEILVKQRINRPVSPHLSIYRPQITWYSSGLYRLTAVIITGSFYLWGFA 89
>gi|407778320|ref|ZP_11125585.1| succinate dehydrogenase, cytochrome b556 subunit [Nitratireductor
pacificus pht-3B]
gi|407300001|gb|EKF19128.1| succinate dehydrogenase, cytochrome b556 subunit [Nitratireductor
pacificus pht-3B]
Length = 135
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL +Y+L T ++SI HR TG AL
Sbjct: 10 RPLSPHLQVYRLIPTMLMSIVHRITGSAL 38
>gi|83592538|ref|YP_426290.1| succinate dehydrogenase subunit C [Rhodospirillum rubrum ATCC
11170]
gi|386349264|ref|YP_006047512.1| succinate dehydrogenase subunit C [Rhodospirillum rubrum F11]
gi|83575452|gb|ABC22003.1| succinate dehydrogenase subunit C [Rhodospirillum rubrum ATCC
11170]
gi|346717700|gb|AEO47715.1| succinate dehydrogenase subunit C [Rhodospirillum rubrum F11]
Length = 132
Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%), Gaps = 2/31 (6%)
Query: 54 RPLSPHLTIYKL--QITSVLSITHRGTGVAL 82
RP+SPHL +YKL ++TS+LSIT R G AL
Sbjct: 6 RPISPHLQVYKLHTKVTSMLSITFRVFGAAL 36
>gi|110635575|ref|YP_675783.1| succinate dehydrogenase subunit C [Chelativorans sp. BNC1]
gi|110286559|gb|ABG64618.1| succinate dehydrogenase subunit C [Chelativorans sp. BNC1]
Length = 134
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 20/29 (68%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IY+ T +SI HR TG AL
Sbjct: 9 RPLSPHLQIYRFTPTMAMSIAHRITGTAL 37
>gi|378786317|dbj|BAL63249.1| succinate:cytochrome c oxidoreductase subunit 3 (mitochondrion)
[Pyropia suborbiculata]
Length = 129
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 52 LGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+ RP+SPHLT+Y Q +S+ SI HR +GV +
Sbjct: 4 INRPVSPHLTVYNPQRSSICSIWHRISGVIM 34
>gi|99078501|ref|YP_611759.1| succinate dehydrogenase subunit C [Ruegeria sp. TM1040]
gi|99035639|gb|ABF62497.1| succinate dehydrogenase subunit C [Ruegeria sp. TM1040]
Length = 127
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 22/27 (81%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGV 80
RPLSPHLTIY+ Q+TS+ SI R TG+
Sbjct: 9 RPLSPHLTIYRPQLTSMSSIMVRITGI 35
>gi|224061007|ref|XP_002300314.1| predicted protein [Populus trichocarpa]
gi|222847572|gb|EEE85119.1| predicted protein [Populus trichocarpa]
Length = 282
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGLTTDI 98
RPLSPHL IY+ Q+ S SI +R +G L+ L + L T +
Sbjct: 194 RPLSPHLPIYRPQVNSTFSIVNRISGAFLSTIVLCFYFICLKTGL 238
>gi|320589791|gb|EFX02247.1| succinate dehydrogenase cytochrome b560 subunit [Grosmannia
clavigera kw1407]
Length = 612
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 25 IRTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIY-KLQITSVLSITHRGTGVALT 83
+R + + P + + ++RL RP+SPHL IY K QI SI HR TG+
Sbjct: 459 LRAVQTRSFTTEKLTPEQANALLASQRLQRPVSPHLDIYDKRQIYFGASILHRFTGLTYA 518
Query: 84 AYALG 88
G
Sbjct: 519 GLLYG 523
>gi|407976712|ref|ZP_11157609.1| succinate dehydrogenase, cytochrome b556 subunit [Nitratireductor
indicus C115]
gi|407427839|gb|EKF40526.1| succinate dehydrogenase, cytochrome b556 subunit [Nitratireductor
indicus C115]
Length = 135
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 22/29 (75%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IY+L T ++SI HR TG AL
Sbjct: 10 RPLSPHLQIYRLIPTMLMSIIHRITGGAL 38
>gi|367024931|ref|XP_003661750.1| hypothetical protein MYCTH_79031 [Myceliophthora thermophila ATCC
42464]
gi|347009018|gb|AEO56505.1| hypothetical protein MYCTH_79031 [Myceliophthora thermophila ATCC
42464]
Length = 188
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 17 SHLRLLPHIRTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSV-LSITH 75
+ L L + T +PVA + E + +RL RP+SPHL+IY Q T SI
Sbjct: 27 ARLGLAQPLSTTQSRPVATQKITAADEYAILAKQRLNRPVSPHLSIYDKQQTWFGGSIWM 86
Query: 76 RGTGVALT 83
R TG A +
Sbjct: 87 RFTGSAFS 94
>gi|156063090|ref|XP_001597467.1| hypothetical protein SS1G_01661 [Sclerotinia sclerotiorum 1980]
gi|154696997|gb|EDN96735.1| hypothetical protein SS1G_01661 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 189
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 27 TITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA-- 84
++ +PV P + + +R RP SPHLTIY+ QI ++S R TG L+
Sbjct: 39 SMQTRPVTTQKLTPKDSYNILVEQRKLRPTSPHLTIYQPQIPWIMSGLFRITGCVLSGGF 98
Query: 85 YALGLAGV-----GLTTDINSVVPTY 105
Y G A + G D S+V +
Sbjct: 99 YVFGAAYLVSPLFGWHLDTASMVAAF 124
>gi|395791756|ref|ZP_10471212.1| succinate dehydrogenase, cytochrome b556 subunit [Bartonella
alsatica IBS 382]
gi|395408059|gb|EJF74679.1| succinate dehydrogenase, cytochrome b556 subunit [Bartonella
alsatica IBS 382]
Length = 138
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RP SPH++IY IT +SI HR TG+AL
Sbjct: 10 RPRSPHISIYHWTITMAMSIAHRITGMAL 38
>gi|86138977|ref|ZP_01057548.1| succinate dehydrogenase, cytochrome b556 subunit [Roseobacter sp.
MED193]
gi|85824208|gb|EAQ44412.1| succinate dehydrogenase, cytochrome b556 subunit [Roseobacter sp.
MED193]
Length = 127
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 24/33 (72%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
R RPLSPHL+IY+ Q+TS+ SI R TG AL
Sbjct: 5 NRGNRPLSPHLSIYRPQMTSLSSILTRITGNAL 37
>gi|408393424|gb|EKJ72688.1| hypothetical protein FPSE_07088 [Fusarium pseudograminearum CS3096]
Length = 187
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 13/59 (22%)
Query: 39 VPSKEGHAVR-NERLGRPLSPHLTIYKLQIT------------SVLSITHRGTGVALTA 84
V ++G + N+RL RP+SPHL IYKL+ T S LS+T G +A A
Sbjct: 47 VSQEDGQQILVNQRLNRPVSPHLAIYKLEQTWFGSSAWNRITGSTLSVTLYGFSIAYLA 105
>gi|268572383|ref|XP_002641307.1| C. briggsae CBR-MEV-1 protein [Caenorhabditis briggsae]
gi|1169193|sp|P41955.1|C560_CAEBR RecName: Full=Succinate dehydrogenase cytochrome b560 subunit,
mitochondrial; Flags: Precursor
gi|450581|gb|AAA20078.1| CDS structure deduced from alignment with C. elegans cyt-1 gene
[Caenorhabditis briggsae]
Length = 184
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 48 RNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGL 94
+ + RP++PHLTIY+ Q+T +LS HR +G + L + G+G
Sbjct: 46 KQRDMKRPIAPHLTIYQPQLTWMLSGFHRISGCVMAGTLL-VGGLGF 91
>gi|167648795|ref|YP_001686458.1| succinate dehydrogenase, cytochrome b556 subunit [Caulobacter sp.
K31]
gi|167351225|gb|ABZ73960.1| succinate dehydrogenase, cytochrome b556 subunit [Caulobacter sp.
K31]
Length = 135
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 19/29 (65%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL +++ IT SI HRG AL
Sbjct: 11 RPLSPHLQVWRWHITMACSILHRGCIFAL 39
>gi|443689028|gb|ELT91539.1| hypothetical protein CAPTEDRAFT_129043 [Capitella teleta]
Length = 128
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGL 89
RPLSPHL +Y+ I SI HR TGV L ALG
Sbjct: 6 RPLSPHLQVYRWSILMTSSILHRMTGVGL---ALGF 38
>gi|218458002|ref|ZP_03498093.1| succinate dehydrogenase, cytochrome b556 subunit [Rhizobium etli
Kim 5]
Length = 90
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYK T V+SI HR TG AL
Sbjct: 23 RPLSPHLQIYKPIPTMVMSIVHRITGGAL 51
>gi|339504581|ref|YP_004692001.1| succinate dehydrogenase cytochrome b556 subunit SdhC [Roseobacter
litoralis Och 149]
gi|338758574|gb|AEI95038.1| succinate dehydrogenase cytochrome b556 subunit SdhC [Roseobacter
litoralis Och 149]
Length = 127
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 23/33 (69%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
R RPLSPHL IY+ Q+TS+ SI R TG AL
Sbjct: 5 NRGNRPLSPHLRIYRPQLTSITSILTRITGNAL 37
>gi|56752597|gb|AAW24512.1| SJCHGC05423 protein [Schistosoma japonicum]
gi|226489330|emb|CAX75809.1| succinate dehydrogenase complex, subunit C, integral membrane
protein [Schistosoma japonicum]
gi|226489332|emb|CAX75810.1| succinate dehydrogenase complex, subunit C, integral membrane
protein [Schistosoma japonicum]
gi|226489334|emb|CAX75811.1| succinate dehydrogenase complex, subunit C, integral membrane
protein [Schistosoma japonicum]
gi|226489336|emb|CAX75812.1| succinate dehydrogenase complex, subunit C, integral membrane
protein [Schistosoma japonicum]
gi|226489338|emb|CAX75813.1| succinate dehydrogenase complex, subunit C, integral membrane
protein [Schistosoma japonicum]
gi|226489340|emb|CAX75814.1| succinate dehydrogenase complex, subunit C, integral membrane
protein [Schistosoma japonicum]
Length = 192
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 48 RNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT--AYALGLAGVGLTTDINSVVP 103
+N GRP SPHL IY + S HR TG+A+ ++G+ T +SV+
Sbjct: 65 KNITGGRPWSPHLQIYSAPLVMRFSFLHRATGIAMAIVWSSVGIGAFFFTGHYDSVLD 122
>gi|413933969|gb|AFW68520.1| succinate dehydrogenase subunit 3 [Zea mays]
Length = 117
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL + K Q ++ SI+HR GVAL
Sbjct: 70 RPLSPHLPLKKPQFSATFSISHRIFGVAL 98
>gi|390449712|ref|ZP_10235315.1| succinate dehydrogenase, cytochrome b556 subunit [Nitratireductor
aquibiodomus RA22]
gi|389663668|gb|EIM75187.1| succinate dehydrogenase, cytochrome b556 subunit [Nitratireductor
aquibiodomus RA22]
Length = 135
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL +Y+L T ++SI HR TG AL
Sbjct: 10 RPLSPHLQVYRLIPTMLMSIVHRITGGAL 38
>gi|323649888|ref|YP_004237261.1| succinate dehydrogenase subunit 3 (mitochondrion) [Ricinus
communis]
gi|322394268|gb|ADW96025.1| succinate dehydrogenase subunit 3 (mitochondrion) [Ricinus
communis]
Length = 103
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYK Q+TS I+HR +G L
Sbjct: 5 RPLSPHLPIYKPQLTSTYPISHRISGAFL 33
>gi|254448802|ref|ZP_05062259.1| succinate dehydrogenase, cytochrome b556 subunit [gamma
proteobacterium HTCC5015]
gi|198261643|gb|EDY85931.1| succinate dehydrogenase, cytochrome b556 subunit [gamma
proteobacterium HTCC5015]
Length = 119
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 22/28 (78%)
Query: 56 LSPHLTIYKLQITSVLSITHRGTGVALT 83
+SPHL +Y+L + + LSI HR TGVAL+
Sbjct: 1 MSPHLQVYRLPMLAWLSILHRATGVALS 28
>gi|402489850|ref|ZP_10836643.1| succinate dehydrogenase, cytochrome b556 subunit [Rhizobium sp.
CCGE 510]
gi|401811189|gb|EJT03558.1| succinate dehydrogenase, cytochrome b556 subunit [Rhizobium sp.
CCGE 510]
Length = 131
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYK T V+SI HR TG AL
Sbjct: 8 RPLSPHLQIYKPIPTMVMSIVHRITGSAL 36
>gi|308497614|ref|XP_003110994.1| CRE-MEV-1 protein [Caenorhabditis remanei]
gi|308242874|gb|EFO86826.1| CRE-MEV-1 protein [Caenorhabditis remanei]
Length = 184
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 45 HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGL 94
+ ++ RP++PHLTIY+ Q+T +LS HR +G + L + G+G
Sbjct: 43 YLMKQRAKNRPIAPHLTIYQPQLTWMLSGFHRISGCVMAGTLL-VGGIGF 91
>gi|226495047|ref|NP_001149724.1| succinate dehydrogenase subunit 3 [Zea mays]
gi|195605954|gb|ACG24807.1| succinate dehydrogenase subunit 3 [Zea mays]
gi|195629790|gb|ACG36536.1| succinate dehydrogenase subunit 3 [Zea mays]
Length = 117
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL + K Q ++ SI+HR GVAL
Sbjct: 70 RPLSPHLPLKKPQFSATFSISHRIFGVAL 98
>gi|451942652|ref|YP_007463289.1| succinate dehydrogenase cytochrome b560 subunit [Bartonella
vinsonii subsp. berkhoffii str. Winnie]
gi|451902039|gb|AGF76501.1| succinate dehydrogenase cytochrome b560 subunit [Bartonella
vinsonii subsp. berkhoffii str. Winnie]
Length = 133
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RP SPH++IY+ IT +SI HR TG+ L
Sbjct: 10 RPRSPHVSIYRWTITMAMSIAHRITGMVL 38
>gi|300121288|emb|CBK21668.2| unnamed protein product [Blastocystis hominis]
Length = 154
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 53 GRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVP 103
GR +SPHL+IYK++ ++ S HR TG+ L +G G+T VP
Sbjct: 22 GRMVSPHLSIYKVRWATMSSGCHRLTGLGLW---MGFTAAGITACCGVSVP 69
>gi|300175942|emb|CBK21938.2| Succinate dehydrogenase cytochrome b560 (SDHC) [Blastocystis
hominis]
Length = 152
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 53 GRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVP 103
GR +SPHL+IYK++ ++ S HR TG+ L +G G+T VP
Sbjct: 22 GRMVSPHLSIYKVRWATMSSGCHRLTGLGLW---MGFTAAGITACCGVSVP 69
>gi|401626275|gb|EJS44228.1| YMR118C [Saccharomyces arboricola H-6]
Length = 193
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 38 GVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGLTTD 97
G + E + ++R RP+SPHLTIY+ +++ LS HR +GV L ALG +T
Sbjct: 54 GSCNGEEDLLISQRKQRPISPHLTIYEPEMSWYLSSLHRISGVLL---ALGFYVFTVTLG 110
Query: 98 INSVV 102
+ +++
Sbjct: 111 VTTIL 115
>gi|341878862|gb|EGT34797.1| CBN-MEV-1 protein [Caenorhabditis brenneri]
Length = 183
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 45 HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGL 94
+ ++ RP++PHLTIY+ Q+T +LS HR +G + L + G+G
Sbjct: 43 YLMKQRAKSRPIAPHLTIYQPQLTWMLSGFHRISGCVMAGTLL-VGGIGF 91
>gi|408376386|ref|ZP_11173991.1| succinate dehydrogenase, cytochrome b556 subunit [Agrobacterium
albertimagni AOL15]
gi|407749853|gb|EKF61364.1| succinate dehydrogenase, cytochrome b556 subunit [Agrobacterium
albertimagni AOL15]
Length = 131
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYK T ++SI HR TG AL
Sbjct: 8 RPLSPHLQIYKPIPTMIMSILHRITGAAL 36
>gi|226532415|ref|NP_001147745.1| LOC100281355 [Zea mays]
gi|195605110|gb|ACG24385.1| succinate dehydrogenase subunit 3 [Zea mays]
gi|195605432|gb|ACG24546.1| succinate dehydrogenase subunit 3 [Zea mays]
gi|195613432|gb|ACG28546.1| succinate dehydrogenase subunit 3 [Zea mays]
gi|195618284|gb|ACG30972.1| succinate dehydrogenase subunit 3 [Zea mays]
gi|195619232|gb|ACG31446.1| succinate dehydrogenase subunit 3 [Zea mays]
gi|195641204|gb|ACG40070.1| succinate dehydrogenase subunit 3 [Zea mays]
gi|224032159|gb|ACN35155.1| unknown [Zea mays]
gi|414870914|tpg|DAA49471.1| TPA: Succinate dehydrogenase subunit 3 isoform 1 [Zea mays]
gi|414870915|tpg|DAA49472.1| TPA: Succinate dehydrogenase subunit 3 isoform 2 [Zea mays]
gi|414870916|tpg|DAA49473.1| TPA: Succinate dehydrogenase subunit 3 isoform 3 [Zea mays]
gi|414870917|tpg|DAA49474.1| TPA: Succinate dehydrogenase subunit 3 isoform 4 [Zea mays]
gi|414870918|tpg|DAA49475.1| TPA: Succinate dehydrogenase subunit 3 isoform 5 [Zea mays]
gi|414870919|tpg|DAA49476.1| TPA: Succinate dehydrogenase subunit 3 isoform 6 [Zea mays]
Length = 118
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL + K Q ++ SI+HR GVAL
Sbjct: 71 RPLSPHLPLKKPQFSATFSISHRIFGVAL 99
>gi|114571387|ref|YP_758067.1| succinate dehydrogenase, cytochrome b subunit [Maricaulis maris
MCS10]
gi|114341849|gb|ABI67129.1| succinate dehydrogenase, cytochrome b subunit [Maricaulis maris
MCS10]
Length = 130
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 19/28 (67%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVA 81
RP+SPHL +++ T SI HR TGVA
Sbjct: 9 RPMSPHLQVWRWHATMASSILHRATGVA 36
>gi|240140347|ref|YP_002964826.1| succinate dehydrogenase, cytochrome b556 subunit
[Methylobacterium extorquens AM1]
gi|418059578|ref|ZP_12697522.1| succinate dehydrogenase, cytochrome b556 subunit
[Methylobacterium extorquens DSM 13060]
gi|27902656|gb|AAO24619.1| succinate dehydrogenase gamma subunit [Methylobacterium
extorquens]
gi|240010323|gb|ACS41549.1| succinate dehydrogenase, cytochrome b556 subunit
[Methylobacterium extorquens AM1]
gi|373566842|gb|EHP92827.1| succinate dehydrogenase, cytochrome b556 subunit
[Methylobacterium extorquens DSM 13060]
Length = 133
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+PLSPHL IY+ T +S+ HR TG AL
Sbjct: 11 QPLSPHLQIYRWTWTMAMSVFHRVTGTAL 39
>gi|407768401|ref|ZP_11115780.1| succinate dehydrogenase cytochrome b-556 subunit [Thalassospira
xiamenensis M-5 = DSM 17429]
gi|407289114|gb|EKF14591.1| succinate dehydrogenase cytochrome b-556 subunit [Thalassospira
xiamenensis M-5 = DSM 17429]
Length = 126
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALT 83
RPLSPHL +Y+L + + +SI+ R GV L
Sbjct: 6 RPLSPHLQVYRLPMAAKMSISFRAMGVGLA 35
>gi|407772361|ref|ZP_11119663.1| succinate dehydrogenase cytochrome b-556 subunit [Thalassospira
profundimaris WP0211]
gi|407284314|gb|EKF09830.1| succinate dehydrogenase cytochrome b-556 subunit [Thalassospira
profundimaris WP0211]
Length = 126
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALT 83
RPLSPHL +Y+L +T+ +SI+ R GV L
Sbjct: 6 RPLSPHLQVYRLPMTAKMSISFRVMGVGLA 35
>gi|346975528|gb|EGY18980.1| succinate dehydrogenase cytochrome b560 subunit [Verticillium
dahliae VdLs.17]
Length = 184
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 25 IRTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSV-LSITHRGTGVALT 83
+ T I+PV P++ + +RL RP SPHLT Y++ T SI R TG L+
Sbjct: 31 LSTSQIRPVGTAKLTPAEGQSILAAQRLQRPTSPHLTAYRMDQTWFGASIWTRFTGGGLS 90
Query: 84 A 84
A
Sbjct: 91 A 91
>gi|403531055|ref|YP_006665584.1| succinate dehydrogenase cytochrome b560 subunit [Bartonella
quintana RM-11]
gi|403233126|gb|AFR26869.1| succinate dehydrogenase cytochrome b560 subunit [Bartonella
quintana RM-11]
Length = 128
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RP SPH++IY+ IT +SI HR TG+ L
Sbjct: 5 RPRSPHVSIYRWTITMAMSIAHRITGLGL 33
>gi|218199733|gb|EEC82160.1| hypothetical protein OsI_26228 [Oryza sativa Indica Group]
Length = 129
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
RPLSPHL + K Q+++ SI+HR G AL A
Sbjct: 82 RPLSPHLPLKKPQLSATFSISHRIFGAALGA 112
>gi|115472415|ref|NP_001059806.1| Os07g0521000 [Oryza sativa Japonica Group]
gi|14861490|gb|AAK73695.1|AF362742_1 succinate dehydrogenase subunit 3 [Oryza sativa]
gi|34393293|dbj|BAC83222.1| succinate dehydrogenase subunit 3 [Oryza sativa Japonica Group]
gi|113611342|dbj|BAF21720.1| Os07g0521000 [Oryza sativa Japonica Group]
gi|125600467|gb|EAZ40043.1| hypothetical protein OsJ_24481 [Oryza sativa Japonica Group]
gi|215765011|dbj|BAG86708.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 129
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
RPLSPHL + K Q+++ SI+HR G AL A
Sbjct: 82 RPLSPHLPLKKPQLSATFSISHRIFGAALGA 112
>gi|406705608|ref|YP_006755961.1| succinate dehydrogenase subunit C [alpha proteobacterium HIMB5]
gi|406651384|gb|AFS46784.1| succinate dehydrogenase subunit C [alpha proteobacterium HIMB5]
Length = 127
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 20/23 (86%)
Query: 54 RPLSPHLTIYKLQITSVLSITHR 76
RPLSPH+ IY+ I+S++SI+HR
Sbjct: 5 RPLSPHIQIYRWHISSLVSISHR 27
>gi|388504542|gb|AFK40337.1| unknown [Lotus japonicus]
Length = 219
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
RPLSPHL +Y+ Q++S LSI +R G +L A
Sbjct: 132 RPLSPHLPVYQPQLSSTLSIFNRIAGASLAA 162
>gi|16127759|ref|NP_422323.1| succinate dehydrogenase, cytochrome b556 subunit [Caulobacter
crescentus CB15]
gi|221236580|ref|YP_002519017.1| succinate dehydrogenase cytochrome B-556 subunit [Caulobacter
crescentus NA1000]
gi|13425261|gb|AAK25491.1| succinate dehydrogenase, cytochrome b556 subunit [Caulobacter
crescentus CB15]
gi|220965753|gb|ACL97109.1| succinate dehydrogenase cytochrome B-556 subunit [Caulobacter
crescentus NA1000]
Length = 135
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RP+SPHL +++ IT SI HRG V L
Sbjct: 11 RPMSPHLQVWRWHITMACSILHRGCVVGL 39
>gi|49474757|ref|YP_032799.1| succinate dehydrogenase cytochrome b560 subunit [Bartonella
quintana str. Toulouse]
gi|49240261|emb|CAF26731.1| Succinate dehydrogenase cytochrome b560 subunit [Bartonella
quintana str. Toulouse]
Length = 133
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RP SPH++IY+ IT +SI HR TG+ L
Sbjct: 10 RPRSPHVSIYRWTITMAMSIAHRITGLGL 38
>gi|424897361|ref|ZP_18320935.1| succinate dehydrogenase, cytochrome b556 subunit [Rhizobium
leguminosarum bv. trifolii WSM2297]
gi|393181588|gb|EJC81627.1| succinate dehydrogenase, cytochrome b556 subunit [Rhizobium
leguminosarum bv. trifolii WSM2297]
Length = 131
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYK T V+SI HR TG AL
Sbjct: 8 RPLSPHLQIYKPIPTMVMSIVHRITGGAL 36
>gi|424886717|ref|ZP_18310325.1| succinate dehydrogenase, cytochrome b556 subunit [Rhizobium
leguminosarum bv. trifolii WSM2012]
gi|393176068|gb|EJC76110.1| succinate dehydrogenase, cytochrome b556 subunit [Rhizobium
leguminosarum bv. trifolii WSM2012]
Length = 131
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYK T V+SI HR TG AL
Sbjct: 8 RPLSPHLQIYKPIPTMVMSIVHRITGGAL 36
>gi|56756809|gb|AAW26576.1| SJCHGC03139 protein [Schistosoma japonicum]
Length = 132
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 18/30 (60%)
Query: 53 GRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
GRP SPHL IY + S HR TG+A+
Sbjct: 70 GRPWSPHLQIYSAPLVMRFSFLHRATGIAM 99
>gi|421589550|ref|ZP_16034679.1| succinate dehydrogenase, cytochrome b556 subunit [Rhizobium sp.
Pop5]
gi|403705490|gb|EJZ21070.1| succinate dehydrogenase, cytochrome b556 subunit [Rhizobium sp.
Pop5]
Length = 131
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYK T V+SI HR TG AL
Sbjct: 8 RPLSPHLQIYKPIPTMVMSIVHRITGGAL 36
>gi|424916466|ref|ZP_18339830.1| succinate dehydrogenase, cytochrome b556 subunit [Rhizobium
leguminosarum bv. trifolii WSM597]
gi|392852642|gb|EJB05163.1| succinate dehydrogenase, cytochrome b556 subunit [Rhizobium
leguminosarum bv. trifolii WSM597]
Length = 131
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYK T V+SI HR TG AL
Sbjct: 8 RPLSPHLQIYKPIPTMVMSIVHRITGGAL 36
>gi|218682066|ref|ZP_03529667.1| succinate dehydrogenase, cytochrome b556 subunit [Rhizobium etli
CIAT 894]
Length = 131
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYK T V+SI HR TG AL
Sbjct: 8 RPLSPHLQIYKPIPTMVMSIVHRITGGAL 36
>gi|209551264|ref|YP_002283181.1| succinate dehydrogenase, cytochrome b556 subunit [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|241206664|ref|YP_002977760.1| succinate dehydrogenase, cytochrome b556 subunit [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|209537020|gb|ACI56955.1| succinate dehydrogenase, cytochrome b556 subunit [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|240860554|gb|ACS58221.1| succinate dehydrogenase, cytochrome b556 subunit [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 131
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYK T V+SI HR TG AL
Sbjct: 8 RPLSPHLQIYKPIPTMVMSIVHRITGGAL 36
>gi|342880738|gb|EGU81761.1| hypothetical protein FOXB_07716 [Fusarium oxysporum Fo5176]
Length = 188
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%), Gaps = 4/49 (8%)
Query: 41 SKEGHAVR-NERLGRPLSPHLTIYKL-QITSVLSITHRGTGVAL--TAY 85
KEGH V +RL RP++P+LTIYK+ Q+ S R TG+A+ TAY
Sbjct: 49 QKEGHDVLVKQRLNRPVTPNLTIYKVGQVWFSASAWTRITGLAVGGTAY 97
>gi|405381068|ref|ZP_11034901.1| succinate dehydrogenase, cytochrome b556 subunit [Rhizobium sp.
CF142]
gi|397322536|gb|EJJ26941.1| succinate dehydrogenase, cytochrome b556 subunit [Rhizobium sp.
CF142]
Length = 130
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYK T V+SI HR TG AL
Sbjct: 7 RPLSPHLQIYKPIPTMVMSIVHRITGGAL 35
>gi|163853006|ref|YP_001641049.1| succinate dehydrogenase, cytochrome b556 subunit
[Methylobacterium extorquens PA1]
gi|218531816|ref|YP_002422632.1| succinate dehydrogenase, cytochrome b556 subunit
[Methylobacterium extorquens CM4]
gi|254562942|ref|YP_003070037.1| succinate dehydrogenase, cytochrome b556 subunit
[Methylobacterium extorquens DM4]
gi|163664611|gb|ABY31978.1| succinate dehydrogenase, cytochrome b556 subunit
[Methylobacterium extorquens PA1]
gi|218524119|gb|ACK84704.1| succinate dehydrogenase, cytochrome b556 subunit
[Methylobacterium extorquens CM4]
gi|254270220|emb|CAX26214.1| succinate dehydrogenase, cytochrome b556 subunit
[Methylobacterium extorquens DM4]
Length = 133
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+PLSPHL IY+ T +S+ HR TG AL
Sbjct: 11 QPLSPHLQIYRWTWTMAMSVFHRITGTAL 39
>gi|399039635|ref|ZP_10735144.1| succinate dehydrogenase, cytochrome b556 subunit [Rhizobium sp.
CF122]
gi|398062048|gb|EJL53829.1| succinate dehydrogenase, cytochrome b556 subunit [Rhizobium sp.
CF122]
Length = 131
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYK T V+SI HR TG AL
Sbjct: 8 RPLSPHLQIYKPIPTMVMSIVHRITGGAL 36
>gi|9653243|ref|NP_062489.1| succinate:cytochrome c oxidoreductase subunit 3 [Chondrus
crispus]
gi|1345638|sp|P48934.1|C560_CHOCR RecName: Full=Succinate dehydrogenase cytochrome b560 subunit;
AltName: Full=Succinate dehydrogenase, subunit III
gi|1334490|emb|CAA87612.1| succinate dehydrogenase, subunit III [Chondrus crispus]
Length = 127
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 53 GRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RP++PHL +Y Q++S+ SI HR +GV L
Sbjct: 9 NRPIAPHLLVYTPQLSSLFSIWHRISGVGL 38
>gi|23011496|ref|ZP_00051838.1| COG2009: Succinate dehydrogenase/fumarate reductase, cytochrome b
subunit [Magnetospirillum magnetotacticum MS-1]
Length = 134
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+PLSPHL IY+ T +S+ HR TG AL
Sbjct: 11 QPLSPHLQIYRWTWTMAMSVFHRITGTAL 39
>gi|325294014|ref|YP_004279878.1| succinate dehydrogenase cytochrome B-556 subunit [Agrobacterium
sp. H13-3]
gi|325061867|gb|ADY65558.1| succinate dehydrogenase cytochrome B-556 subunit [Agrobacterium
sp. H13-3]
Length = 130
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 20/29 (68%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYK T V SI HR TG AL
Sbjct: 8 RPLSPHLQIYKPIPTMVASIVHRITGAAL 36
>gi|188583472|ref|YP_001926917.1| succinate dehydrogenase, cytochrome b556 subunit
[Methylobacterium populi BJ001]
gi|179346970|gb|ACB82382.1| succinate dehydrogenase, cytochrome b556 subunit
[Methylobacterium populi BJ001]
Length = 133
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 52 LGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+ +PLSPHL IY+ T +S+ HR TG AL
Sbjct: 9 VAQPLSPHLQIYRWTWTMAMSVFHRITGTAL 39
>gi|338972609|ref|ZP_08627981.1| succinate dehydrogenase cytochrome b-556 subunit
[Bradyrhizobiaceae bacterium SG-6C]
gi|338234158|gb|EGP09276.1| succinate dehydrogenase cytochrome b-556 subunit
[Bradyrhizobiaceae bacterium SG-6C]
Length = 131
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 51 RLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
R+ RPLSP LT Y+ +T +SI HR TG+AL
Sbjct: 4 RIDRPLSPFLT-YRWTLTMAMSIVHRITGIAL 34
>gi|414169556|ref|ZP_11425289.1| succinate dehydrogenase, cytochrome b556 subunit [Afipia
clevelandensis ATCC 49720]
gi|410885288|gb|EKS33103.1| succinate dehydrogenase, cytochrome b556 subunit [Afipia
clevelandensis ATCC 49720]
Length = 131
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 51 RLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
R+ RPLSP LT Y+ +T +SI HR TG+AL
Sbjct: 4 RIDRPLSPFLT-YRWTLTMAMSIVHRITGIAL 34
>gi|32400816|gb|AAP80640.1|AF475119_1 succinate dehydrogenase subunit 3, partial [Triticum aestivum]
Length = 132
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
RPLSPHL + K Q+++ SI+HR G AL A
Sbjct: 85 RPLSPHLPLKKPQLSATFSISHRIFGAALGA 115
>gi|378827754|ref|YP_005190486.1| Succinate dehydrogenase cytochrome b-556 subunit [Sinorhizobium
fredii HH103]
gi|365180806|emb|CCE97661.1| Succinate dehydrogenase cytochrome b-556 subunit [Sinorhizobium
fredii HH103]
Length = 130
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYK T V+SI HR TG AL
Sbjct: 8 RPLSPHLQIYKPIPTMVMSIVHRITGGAL 36
>gi|418409277|ref|ZP_12982590.1| succinate dehydrogenase, cytochrome b556 subunit [Agrobacterium
tumefaciens 5A]
gi|358004594|gb|EHJ96922.1| succinate dehydrogenase, cytochrome b556 subunit [Agrobacterium
tumefaciens 5A]
Length = 130
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 20/29 (68%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYK T V SI HR TG AL
Sbjct: 8 RPLSPHLQIYKPIPTMVASIVHRITGAAL 36
>gi|296412597|ref|XP_002836009.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629809|emb|CAZ80166.1| unnamed protein product [Tuber melanosporum]
Length = 181
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Query: 6 KLSTLCNPIASSHLRLLPHIRTITIKPVAAPTGVPSKEGHAVR-NERLGRPLSPHLTIYK 64
KLS L P + + R I A+ H++ +R RP+SPHL IY+
Sbjct: 10 KLSALPKPFLIARSLVASQFRPIATSISASTQNFSPDGAHSILVAQRKQRPISPHLGIYQ 69
Query: 65 LQITSVLSITHRGTGVALTAYALGL 89
Q+T S +R TG L+ A G
Sbjct: 70 PQLTWCGSAANRITGSILSVGAYGF 94
>gi|227823652|ref|YP_002827625.1| succinate dehydrogenase membrane anchor subunit [Sinorhizobium
fredii NGR234]
gi|227342654|gb|ACP26872.1| putative succinate dehydrogenase membrane anchor subunit
[Sinorhizobium fredii NGR234]
Length = 130
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYK T V+SI HR TG AL
Sbjct: 8 RPLSPHLQIYKPIPTMVMSIVHRITGGAL 36
>gi|399042721|ref|ZP_10737333.1| succinate dehydrogenase, cytochrome b556 subunit [Rhizobium sp.
CF122]
gi|398058840|gb|EJL50717.1| succinate dehydrogenase, cytochrome b556 subunit [Rhizobium sp.
CF122]
Length = 131
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYK T V+SI HR TG AL
Sbjct: 8 RPLSPHLQIYKPIPTMVMSIVHRITGGAL 36
>gi|17554318|ref|NP_499283.1| Protein MEV-1 [Caenorhabditis elegans]
gi|1169194|sp|P41956.1|C560_CAEEL RecName: Full=Succinate dehydrogenase cytochrome b560 subunit,
mitochondrial; Flags: Precursor
gi|433177|gb|AAA20081.1| CYT-1 [Caenorhabditis elegans]
gi|3879510|emb|CAA82572.1| Protein MEV-1 [Caenorhabditis elegans]
Length = 182
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 45 HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGL 94
+ ++ RP++PHLT+Y+ Q+T +LS HR +G + A L + G+G
Sbjct: 43 YLLKQRSKNRPIAPHLTVYQPQLTWMLSGFHRISGCVM-AGTLLVGGIGF 91
>gi|420240243|ref|ZP_14744489.1| succinate dehydrogenase, cytochrome b556 subunit [Rhizobium sp.
CF080]
gi|398077193|gb|EJL68202.1| succinate dehydrogenase, cytochrome b556 subunit [Rhizobium sp.
CF080]
Length = 130
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYK T ++SI HR TG AL
Sbjct: 8 RPLSPHLQIYKPIPTMIMSIVHRITGGAL 36
>gi|393767851|ref|ZP_10356395.1| succinate dehydrogenase, cytochrome b556 subunit
[Methylobacterium sp. GXF4]
gi|392726662|gb|EIZ83983.1| succinate dehydrogenase, cytochrome b556 subunit
[Methylobacterium sp. GXF4]
Length = 133
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+PLSPHL IY+ T +S+ HR TG AL
Sbjct: 11 QPLSPHLQIYRWTWTMAMSVFHRITGTAL 39
>gi|383648463|ref|ZP_09958869.1| succinate dehydrogenase subunit C [Sphingomonas elodea ATCC
31461]
Length = 140
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 47 VRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGL 89
VRN RPLSPHL IYK +SI HR TG + GL
Sbjct: 4 VRNT--ARPLSPHLGIYKWGPHMAVSIIHRATGSGMATVGTGL 44
>gi|313221237|emb|CBY43691.1| unnamed protein product [Oikopleura dioica]
Length = 183
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 49 NERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
N++LGRP+SPHLT+Y I +S +R AL
Sbjct: 50 NKKLGRPMSPHLTVYAWTIPMTMSALNRIFSFAL 83
>gi|313231614|emb|CBY08727.1| unnamed protein product [Oikopleura dioica]
Length = 183
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 49 NERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
N++LGRP+SPHLT+Y I +S +R AL
Sbjct: 50 NKKLGRPMSPHLTVYAWTIPMTMSALNRIFSFAL 83
>gi|224009964|ref|XP_002293940.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970612|gb|EED88949.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 191
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 45 HAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGL 94
++ R + RP+SPH+TIY + ++ SI R TG L+ G AG+G+
Sbjct: 59 YSARMAKTRRPVSPHVTIYSFPVCALSSIATRVTGCILS---FGAAGLGI 105
>gi|398355395|ref|YP_006400859.1| succinate dehydrogenase membrane anchor subunit [Sinorhizobium
fredii USDA 257]
gi|390130721|gb|AFL54102.1| putative succinate dehydrogenase membrane anchor subunit
[Sinorhizobium fredii USDA 257]
Length = 130
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYK T V+SI HR TG AL
Sbjct: 8 RPLSPHLQIYKPIPTMVMSIMHRITGGAL 36
>gi|115401234|ref|XP_001216205.1| hypothetical protein ATEG_07584 [Aspergillus terreus NIH2624]
gi|114190146|gb|EAU31846.1| hypothetical protein ATEG_07584 [Aspergillus terreus NIH2624]
Length = 457
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 59 HLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVPTYL 106
HLT Y+L+ S +S+++RG+ A + LGL GV D V P Y+
Sbjct: 40 HLTPYQLRALSAISVSYRGSTAACRSRGLGLRGV----DAKKVAPGYV 83
>gi|116254178|ref|YP_770016.1| succinate dehydrogenase cytochrome b556 subunit [Rhizobium
leguminosarum bv. viciae 3841]
gi|424872689|ref|ZP_18296351.1| succinate dehydrogenase, cytochrome b556 subunit [Rhizobium
leguminosarum bv. viciae WSM1455]
gi|115258826|emb|CAK09932.1| putative succinate dehydrogenase cytochrome b556 subunit
[Rhizobium leguminosarum bv. viciae 3841]
gi|393168390|gb|EJC68437.1| succinate dehydrogenase, cytochrome b556 subunit [Rhizobium
leguminosarum bv. viciae WSM1455]
Length = 131
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYK T ++SI HR TG AL
Sbjct: 8 RPLSPHLQIYKPIPTMIMSIVHRITGGAL 36
>gi|118485781|gb|ABK94739.1| unknown [Populus trichocarpa]
Length = 282
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYAL 87
RPLSPHL IY Q+ S SI +R +G L+A L
Sbjct: 194 RPLSPHLPIYSPQVHSTFSIVNRISGAYLSALVL 227
>gi|440228194|ref|YP_007335285.1| succinate dehydrogenase, cytochrome b556 subunit [Rhizobium
tropici CIAT 899]
gi|440039705|gb|AGB72739.1| succinate dehydrogenase, cytochrome b556 subunit [Rhizobium
tropici CIAT 899]
Length = 132
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYK T V+SI HR TG AL
Sbjct: 8 RPLSPHLQIYKPIPTMVMSILHRITGGAL 36
>gi|149913137|ref|ZP_01901671.1| succinate dehydrogenase, cytochrome b556 subunit [Roseobacter sp.
AzwK-3b]
gi|149813543|gb|EDM73369.1| succinate dehydrogenase, cytochrome b556 subunit [Roseobacter sp.
AzwK-3b]
Length = 127
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL +Y+ Q+TS+ SI R TG AL
Sbjct: 9 RPLSPHLQVYRPQMTSISSILTRITGNAL 37
>gi|254781041|ref|YP_003065454.1| succinate dehydrogenase protein, cytochrome b subunit [Candidatus
Liberibacter asiaticus str. psy62]
gi|254040718|gb|ACT57514.1| succinate dehydrogenase protein, cytochrome b subunit [Candidatus
Liberibacter asiaticus str. psy62]
Length = 129
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 19/27 (70%)
Query: 53 GRPLSPHLTIYKLQITSVLSITHRGTG 79
RPLSPHL IY+L T +SI HR TG
Sbjct: 7 NRPLSPHLQIYRLIPTMFVSIVHRITG 33
>gi|222087469|ref|YP_002546006.1| succinate dehydrogenase, cytochrome b556 subunit [Agrobacterium
radiobacter K84]
gi|221724917|gb|ACM28073.1| succinate dehydrogenase, cytochrome b556 subunit [Agrobacterium
radiobacter K84]
Length = 133
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYK T ++SI HR TG AL
Sbjct: 9 RPLSPHLQIYKPIPTMIMSIVHRITGGAL 37
>gi|398377065|ref|ZP_10535244.1| succinate dehydrogenase, cytochrome b556 subunit [Rhizobium sp.
AP16]
gi|397727266|gb|EJK87693.1| succinate dehydrogenase, cytochrome b556 subunit [Rhizobium sp.
AP16]
Length = 132
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYK T ++SI HR TG AL
Sbjct: 8 RPLSPHLQIYKPIPTMIMSIVHRITGGAL 36
>gi|224133566|ref|XP_002321606.1| predicted protein [Populus trichocarpa]
gi|222868602|gb|EEF05733.1| predicted protein [Populus trichocarpa]
Length = 91
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 24/41 (58%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGL 94
RPLSPHL IY Q+ S SI +R +G L+A L + L
Sbjct: 4 RPLSPHLPIYSPQVHSTFSIVNRISGAYLSALVLFFCLICL 44
>gi|407722137|ref|YP_006841799.1| succinate dehydrogenase cytochrome B-556 subunit transmembrane
protein [Sinorhizobium meliloti Rm41]
gi|407320369|emb|CCM68973.1| succinate dehydrogenase cytochrome B-556 subunit transmembrane
protein [Sinorhizobium meliloti Rm41]
Length = 130
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYK T ++SI HR TG AL
Sbjct: 8 RPLSPHLQIYKPIPTMIMSIMHRITGGAL 36
>gi|256071967|ref|XP_002572309.1| succinate dehydrogenase [Schistosoma mansoni]
gi|353229795|emb|CCD75966.1| putative succinate dehydrogenase [Schistosoma mansoni]
Length = 192
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 48 RNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT--AYALGLAGVGLTTDINSVV 102
RN RP SPHL +Y + S HR TG+A+ ++G+ T +S++
Sbjct: 65 RNATEKRPWSPHLQVYSSPLVMRFSFLHRATGIAMAIVWSSVGIGAFFFTGHYDSIL 121
>gi|150398156|ref|YP_001328623.1| succinate dehydrogenase cytochrome b556 subunit [Sinorhizobium
medicae WSM419]
gi|150029671|gb|ABR61788.1| Succinate dehydrogenase cytochrome b556 subunit [Sinorhizobium
medicae WSM419]
Length = 130
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYK T ++SI HR TG AL
Sbjct: 8 RPLSPHLQIYKPIPTMIMSIMHRITGGAL 36
>gi|15966825|ref|NP_387178.1| succinate dehydrogenase cytochrome B-556 subunit transmembrane
protein [Sinorhizobium meliloti 1021]
gi|334317827|ref|YP_004550446.1| succinate dehydrogenase cytochrome b556 subunit [Sinorhizobium
meliloti AK83]
gi|384530951|ref|YP_005715039.1| succinate dehydrogenase, cytochrome b556 subunit [Sinorhizobium
meliloti BL225C]
gi|384537664|ref|YP_005721749.1| succinate dehydrogenase cytochrome B-556 subunit transmembrane
protein [Sinorhizobium meliloti SM11]
gi|418402325|ref|ZP_12975839.1| succinate dehydrogenase, cytochrome b556 subunit [Sinorhizobium
meliloti CCNWSX0020]
gi|433614899|ref|YP_007191697.1| succinate dehydrogenase, cytochrome b556 subunit [Sinorhizobium
meliloti GR4]
gi|15076097|emb|CAC47651.1| Probable succinate dehydrogenase cytochrome B-556 subunit
transmembrane protein [Sinorhizobium meliloti 1021]
gi|333813127|gb|AEG05796.1| succinate dehydrogenase, cytochrome b556 subunit [Sinorhizobium
meliloti BL225C]
gi|334096821|gb|AEG54832.1| succinate dehydrogenase, cytochrome b556 subunit [Sinorhizobium
meliloti AK83]
gi|336034556|gb|AEH80488.1| succinate dehydrogenase cytochrome B-556 subunit transmembrane
protein [Sinorhizobium meliloti SM11]
gi|359503666|gb|EHK76214.1| succinate dehydrogenase, cytochrome b556 subunit [Sinorhizobium
meliloti CCNWSX0020]
gi|429553089|gb|AGA08098.1| succinate dehydrogenase, cytochrome b556 subunit [Sinorhizobium
meliloti GR4]
Length = 130
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 21/29 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYK T ++SI HR TG AL
Sbjct: 8 RPLSPHLQIYKPIPTMIMSIMHRITGGAL 36
>gi|406707296|ref|YP_006757648.1| succinate dehydrogenase subunit C [alpha proteobacterium HIMB59]
gi|406653072|gb|AFS48471.1| succinate dehydrogenase subunit C [alpha proteobacterium HIMB59]
Length = 123
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 55 PLSPHLTIYKLQITSVLSITHRGTGVALTA 84
PLSPHL I+K +T V SITHR +G+ A
Sbjct: 5 PLSPHLQIHKPVLTMVFSITHRISGIIFAA 34
>gi|197107551|gb|ACH42355.1| succinate dehydrogenase subunit 3, partial (mitochondrion)
[Nymphaea tetragona]
Length = 79
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 6/45 (13%)
Query: 55 PLSPHLTIYKLQITSVLSITHRGTG-----VALTAYALGLAGVGL 94
PLSPHL IYK Q+TS I+HR +G + L +Y L L +GL
Sbjct: 1 PLSPHLPIYKPQLTSTFPISHRISGAFLVTIVLFSYLLCL-KIGL 44
>gi|2623844|gb|AAB86570.1| unknown [Schistosoma mansoni]
Length = 198
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 48 RNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALT--AYALGLAGVGLTTDINSVV 102
RN RP SPHL +Y + S HR TG+A+ ++G+ T +S++
Sbjct: 71 RNATEKRPWSPHLQVYSSPLVMRFSFLHRATGIAMAIVWSSVGIGAFFFTGHYDSIL 127
>gi|340027732|ref|ZP_08663795.1| succinate dehydrogenase cytochrome b556 subunit [Paracoccus sp.
TRP]
Length = 130
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
R RPLSPHL +Y+L + ++ SI R TG AL A
Sbjct: 5 NRGNRPLSPHLQVYRLPLAAITSIMTRITGHALVA 39
>gi|378733910|gb|EHY60369.1| succinate dehydrogenase (ubiquinone) cytochrome B subunit
[Exophiala dermatitidis NIH/UT8656]
Length = 201
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 27 TITIKPVAAPTGVPS----KEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
T + KP P + S + + + R RP+SPHL IY+ QIT V T R + +
Sbjct: 48 TTSSKPDTKPPQIESITAAQHAEYLASRRRERPVSPHLAIYRPQITWVSGATMRNVSMFI 107
Query: 83 TA--YALGLAGV-----GLTTDINSVVPTY 105
A Y G A + G D S+V +
Sbjct: 108 AAPIYIFGAAYLVSPLFGWHLDTTSMVEWF 137
>gi|302408597|ref|XP_003002133.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261359054|gb|EEY21482.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 149
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 27 TITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSV-LSITHRGTGVALTA 84
T I+PV P++ + +RL RP SPHLT Y++ T SI R TG L+A
Sbjct: 33 TSQIRPVGTAKLTPAEGQSILAAQRLQRPTSPHLTAYRIDQTWFGASIWTRFTGGGLSA 91
>gi|170746891|ref|YP_001753151.1| succinate dehydrogenase, cytochrome b556 subunit
[Methylobacterium radiotolerans JCM 2831]
gi|170653413|gb|ACB22468.1| succinate dehydrogenase, cytochrome b556 subunit
[Methylobacterium radiotolerans JCM 2831]
Length = 133
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+P+SPHL IY+ T +S+ HR TG AL
Sbjct: 11 QPMSPHLQIYRWTWTMAMSVFHRITGTAL 39
>gi|119383319|ref|YP_914375.1| succinate dehydrogenase, cytochrome b subunit [Paracoccus
denitrificans PD1222]
gi|2493412|sp|Q59659.1|DHSC_PARDE RecName: Full=Succinate dehydrogenase cytochrome b556 subunit;
Short=Cytochrome b-556
gi|975316|gb|AAA75175.1| succinate dehydrogenase b-type cytochrome subunit [Paracoccus
denitrificans]
gi|119373086|gb|ABL68679.1| succinate dehydrogenase subunit C [Paracoccus denitrificans
PD1222]
Length = 130
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA 84
R RPLSPHL +Y+L + ++ SI R TG AL A
Sbjct: 5 NRGNRPLSPHLQVYRLPLAAITSIMTRITGHALVA 39
>gi|83944805|ref|ZP_00957171.1| succinate dehydrogenase, cytochrome b556 subunit [Oceanicaulis
sp. HTCC2633]
gi|83851587|gb|EAP89442.1| succinate dehydrogenase, cytochrome b556 subunit [Oceanicaulis
sp. HTCC2633]
Length = 134
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGV 80
RP+SPHL I++ T SI HR TGV
Sbjct: 9 RPISPHLEIWRWHATMASSIFHRATGV 35
>gi|332188523|ref|ZP_08390243.1| succinate dehydrogenase, cytochrome b556 subunit [Sphingomonas
sp. S17]
gi|332011428|gb|EGI53513.1| succinate dehydrogenase, cytochrome b556 subunit [Sphingomonas
sp. S17]
Length = 161
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 46 AVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
A RN RPLSPHL I+K ++SI HR TG +
Sbjct: 27 AARNT--ARPLSPHLQIWKWGPNMLVSILHRATGTGM 61
>gi|389796940|ref|ZP_10199986.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodanobacter
sp. 116-2]
gi|388448033|gb|EIM04024.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodanobacter
sp. 116-2]
Length = 141
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALT 83
RPLSPHL IY+ +I V S HR TG+ L+
Sbjct: 5 RPLSPHLGIYRWRINMVQSSLHRLTGLFLS 34
>gi|352080485|ref|ZP_08951424.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodanobacter
sp. 2APBS1]
gi|351683766|gb|EHA66842.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodanobacter
sp. 2APBS1]
Length = 141
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALT 83
RPLSPHL IY+ +I V S HR TG+ L+
Sbjct: 5 RPLSPHLGIYRWRINMVQSSLHRLTGLFLS 34
>gi|418297807|ref|ZP_12909647.1| succinate dehydrogenase, cytochrome b556 subunit [Agrobacterium
tumefaciens CCNWGS0286]
gi|355537177|gb|EHH06437.1| succinate dehydrogenase, cytochrome b556 subunit [Agrobacterium
tumefaciens CCNWGS0286]
Length = 130
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 20/29 (68%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYK T V SI HR TG AL
Sbjct: 8 RPLSPHLQIYKPIPTMVASIVHRITGGAL 36
>gi|351723459|ref|NP_001235488.1| uncharacterized protein LOC100527396 [Glycine max]
gi|255632256|gb|ACU16486.1| unknown [Glycine max]
Length = 244
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 37 TGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+ +PSK N RPLSPHL +Y+ Q++S LSI +R G L
Sbjct: 142 SDIPSKTSET--NPSGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFL 185
>gi|159185307|ref|NP_355582.2| succinate dehydrogenase cytochrome B-556 subunit [Agrobacterium
fabrum str. C58]
gi|335033565|ref|ZP_08526930.1| succinate dehydrogenase cytochrome B-556 subunit [Agrobacterium
sp. ATCC 31749]
gi|159140565|gb|AAK88367.2| succinate dehydrogenase cytochrome B-556 subunit [Agrobacterium
fabrum str. C58]
gi|333794856|gb|EGL66188.1| succinate dehydrogenase cytochrome B-556 subunit [Agrobacterium
sp. ATCC 31749]
Length = 130
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 20/29 (68%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYK T V SI HR TG AL
Sbjct: 8 RPLSPHLQIYKPIPTMVASIVHRITGGAL 36
>gi|408786338|ref|ZP_11198075.1| succinate dehydrogenase, cytochrome b556 subunit [Rhizobium
lupini HPC(L)]
gi|424911379|ref|ZP_18334756.1| succinate dehydrogenase, cytochrome b556 subunit [Rhizobium
leguminosarum bv. viciae USDA 2370]
gi|392847410|gb|EJA99932.1| succinate dehydrogenase, cytochrome b556 subunit [Rhizobium
leguminosarum bv. viciae USDA 2370]
gi|408487710|gb|EKJ96027.1| succinate dehydrogenase, cytochrome b556 subunit [Rhizobium
lupini HPC(L)]
Length = 130
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 20/29 (68%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYK T V SI HR TG AL
Sbjct: 8 RPLSPHLQIYKPIPTMVASIIHRVTGGAL 36
>gi|149184716|ref|ZP_01863034.1| hypothetical protein ED21_28398 [Erythrobacter sp. SD-21]
gi|148832036|gb|EDL50469.1| hypothetical protein ED21_28398 [Erythrobacter sp. SD-21]
Length = 126
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGL 89
RPLSPHL I+K ++SI HR TG L LG+
Sbjct: 4 RPLSPHLQIWKWGPHMLVSILHRVTGDGLALVGLGV 39
>gi|418937145|ref|ZP_13490814.1| succinate dehydrogenase, cytochrome b556 subunit [Rhizobium sp.
PDO1-076]
gi|375056144|gb|EHS52350.1| succinate dehydrogenase, cytochrome b556 subunit [Rhizobium sp.
PDO1-076]
Length = 130
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 20/29 (68%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL IYK T + SI HR TG AL
Sbjct: 8 RPLSPHLQIYKPIPTMMASIIHRITGAAL 36
>gi|89068123|ref|ZP_01155540.1| succinate dehydrogenase, cytochrome b556 subunit [Oceanicola
granulosus HTCC2516]
gi|89046362|gb|EAR52419.1| succinate dehydrogenase, cytochrome b556 subunit [Oceanicola
granulosus HTCC2516]
Length = 127
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 50 ERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYAL 87
R RPLSPHLT+++ + ++ SI R TG AL AL
Sbjct: 5 NRGNRPLSPHLTVWRWSLPAISSILTRITGNALIVAAL 42
>gi|392950951|ref|ZP_10316506.1| hypothetical protein WQQ_05780 [Hydrocarboniphaga effusa AP103]
gi|391859913|gb|EIT70441.1| hypothetical protein WQQ_05780 [Hydrocarboniphaga effusa AP103]
Length = 134
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Query: 54 RPLSPHLT--IYKLQITSVLSITHRGTGVALT 83
RPLSP + YK Q+TS+LSITHR G+ LT
Sbjct: 11 RPLSPFMIGPYYKPQLTSMLSITHRLAGLILT 42
>gi|356542826|ref|XP_003539866.1| PREDICTED: uncharacterized protein LOC100499683 [Glycine max]
gi|255625753|gb|ACU13221.1| unknown [Glycine max]
Length = 249
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 37 TGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+ +PSK N RPLSPHL +Y+ Q++S LSI +R G L
Sbjct: 147 SDIPSKTSET--NLSGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFL 190
>gi|90021755|ref|YP_527582.1| succinate dehydrogenase subunit C [Saccharophagus degradans 2-40]
gi|89951355|gb|ABD81370.1| succinate dehydrogenase subunit C [Saccharophagus degradans 2-40]
Length = 124
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGL 89
RP++ ++ +L IT+++SITHR TGV L A LGL
Sbjct: 5 RPVNLDISTMRLPITALVSITHRVTGVVLLAGILGL 40
>gi|254455343|ref|ZP_05068772.1| succinate dehydrogenase, cytochrome b556 subunit [Candidatus
Pelagibacter sp. HTCC7211]
gi|207082345|gb|EDZ59771.1| succinate dehydrogenase, cytochrome b556 subunit [Candidatus
Pelagibacter sp. HTCC7211]
Length = 127
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 19/22 (86%)
Query: 55 PLSPHLTIYKLQITSVLSITHR 76
PLSPH+ IY+ I+S++SI+HR
Sbjct: 6 PLSPHIQIYRWHISSLVSISHR 27
>gi|209883444|ref|YP_002287301.1| succinate dehydrogenase cytochrome b556 subunit [Oligotropha
carboxidovorans OM5]
gi|337739475|ref|YP_004631203.1| succinate dehydrogenase, cytochrome b subunit SdhC [Oligotropha
carboxidovorans OM5]
gi|386028494|ref|YP_005949269.1| succinate dehydrogenase, cytochrome b subunit SdhC [Oligotropha
carboxidovorans OM4]
gi|209871640|gb|ACI91436.1| succinate dehydrogenase cytochrome b556 subunit [Oligotropha
carboxidovorans OM5]
gi|336093562|gb|AEI01388.1| succinate dehydrogenase, cytochrome b subunit SdhC [Oligotropha
carboxidovorans OM4]
gi|336097139|gb|AEI04962.1| succinate dehydrogenase, cytochrome b subunit SdhC [Oligotropha
carboxidovorans OM5]
Length = 131
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSP LT Y+ +T +S+ HR TG+AL
Sbjct: 7 RPLSPFLT-YRWTLTMAMSLIHRATGIAL 34
>gi|338724813|ref|XP_003365025.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit,
mitochondrial-like isoform 2 [Equus caballus]
Length = 135
Score = 34.7 bits (78), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 56 LSPHLTIYKLQITSVLSITHRGTGVALTA 84
LSP L I + V+SI HRGTG+AL+A
Sbjct: 18 LSPQLCIRNWSLPMVMSICHRGTGIALSA 46
>gi|384252986|gb|EIE26461.1| succinate dehydrogenase subunit b560 [Coccomyxa subellipsoidea
C-169]
Length = 207
Score = 34.3 bits (77), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Query: 54 RPLSPHLTI-------YKLQITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVV 102
RP+SPH+ Y + I ++ SI +R TGVALT G + LT D+ + +
Sbjct: 74 RPVSPHVFEEGGTKFHYNMPINAITSIMNRATGVALTVGFTGAGWIALTGDLPATI 129
>gi|14861486|gb|AAK73693.1|AF362740_1 succinate dehydrogenase subunit 3 [Glycine max]
Length = 157
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 37 TGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVAL 82
+ +PSK N RPLSPHL +Y+ Q++S LSI +R G L
Sbjct: 55 SDIPSKTSET--NPSGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFL 98
>gi|295687606|ref|YP_003591299.1| succinate dehydrogenase cytochrome b556 subunit [Caulobacter
segnis ATCC 21756]
gi|295429509|gb|ADG08681.1| succinate dehydrogenase, cytochrome b556 subunit [Caulobacter
segnis ATCC 21756]
Length = 135
Score = 34.3 bits (77), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RP+SPHL +++ IT SI HR V L
Sbjct: 11 RPMSPHLQVWRWHITMACSILHRACVVGL 39
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.135 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,609,412,128
Number of Sequences: 23463169
Number of extensions: 61665384
Number of successful extensions: 305560
Number of sequences better than 100.0: 800
Number of HSP's better than 100.0 without gapping: 773
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 304776
Number of HSP's gapped (non-prelim): 801
length of query: 106
length of database: 8,064,228,071
effective HSP length: 74
effective length of query: 32
effective length of database: 6,327,953,565
effective search space: 202494514080
effective search space used: 202494514080
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)