Your job contains 1 sequence.
>psy9435
MNSIFKLSTLCNPIASSHLRLLPHIRTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHL
TIYKLQITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVPTYL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy9435
(106 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0037873 - symbol:SdhC "Succinate dehydrogenase C" ... 162 5.0e-12 1
ZFIN|ZDB-GENE-040801-26 - symbol:sdhc "succinate dehydrog... 131 9.7e-09 1
UNIPROTKB|D0VWV4 - symbol:SDHC "Succinate dehydrogenase c... 125 4.2e-08 1
UNIPROTKB|E2R9X4 - symbol:SDHC "Uncharacterized protein" ... 122 8.7e-08 1
UNIPROTKB|Q99643 - symbol:SDHC "Succinate dehydrogenase c... 121 1.1e-07 1
MGI|MGI:1913302 - symbol:Sdhc "succinate dehydrogenase co... 121 1.1e-07 1
FB|FBgn0037860 - symbol:CG6629 species:7227 "Drosophila m... 123 1.9e-07 1
UNIPROTKB|P35720 - symbol:SDHC "Succinate dehydrogenase c... 117 2.9e-07 1
UNIPROTKB|P70097 - symbol:SDHC "Succinate dehydrogenase c... 116 3.8e-07 1
DICTYBASE|DDB_G0275115 - symbol:sdhC "succinate dehydroge... 116 3.8e-07 1
RGD|1359454 - symbol:Sdhc "succinate dehydrogenase comple... 115 4.8e-07 1
TIGR_CMR|APH_0999 - symbol:APH_0999 "succinate dehydrogen... 109 2.1e-06 1
ASPGD|ASPL0000076613 - symbol:carC species:162425 "Emeric... 107 4.6e-06 1
CGD|CAL0004732 - symbol:orf19.1480 species:5476 "Candida ... 105 5.5e-06 1
UNIPROTKB|Q5ALU6 - symbol:CaO19.1480 "Putative uncharacte... 105 5.5e-06 1
POMBASE|SPCC330.12c - symbol:sdh3 "succinate dehydrogenas... 105 6.1e-06 1
SGD|S000001624 - symbol:SDH3 "Subunit of both succinate d... 102 2.0e-05 1
SGD|S000004724 - symbol:SHH3 "Putative mitochondrial inne... 98 5.7e-05 1
TIGR_CMR|SPO_0358 - symbol:SPO_0358 "succinate dehydrogen... 94 8.1e-05 1
TAIR|locus:2116520 - symbol:SDH3-2 "succinate dehydrogena... 93 0.00027 1
TAIR|locus:2144816 - symbol:SDH3-1 "succinate dehydrogena... 93 0.00027 1
>FB|FBgn0037873 [details] [associations]
symbol:SdhC "Succinate dehydrogenase C" species:7227
"Drosophila melanogaster" [GO:0006105 "succinate metabolic process"
evidence=ISS] [GO:0000104 "succinate dehydrogenase activity"
evidence=ISS] [GO:0005749 "mitochondrial respiratory chain complex
II" evidence=ISS] [GO:0006099 "tricarboxylic acid cycle"
evidence=ISS] [GO:0006121 "mitochondrial electron transport,
succinate to ubiquinone" evidence=ISS;IMP] [GO:0008177 "succinate
dehydrogenase (ubiquinone) activity" evidence=ISS] [GO:0009055
"electron carrier activity" evidence=IEA] [GO:0006979 "response to
oxidative stress" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR000701 InterPro:IPR014314
InterPro:IPR018495 Pfam:PF01127 PROSITE:PS01001 GO:GO:0008340
GO:GO:0006979 GO:GO:0009055 GO:GO:0006099 eggNOG:COG2009
GO:GO:0000104 InterPro:IPR014361 PIRSF:PIRSF000178
TIGRFAMs:TIGR02970 GO:GO:0006121 GO:GO:0045281 EMBL:AY113556
HSSP:P10446 ProteinModelPortal:Q8MYW1 SMR:Q8MYW1 STRING:Q8MYW1
PaxDb:Q8MYW1 PRIDE:Q8MYW1 FlyBase:FBgn0037873 InParanoid:Q8MYW1
OrthoDB:EOG42V6ZM ArrayExpress:Q8MYW1 Bgee:Q8MYW1 Uniprot:Q8MYW1
Length = 171
Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 40/93 (43%), Positives = 57/93 (61%)
Query: 8 STLCNPIASSHLRLLPHIRTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQI 67
S + +P L++ R +++K V+ E +NERLGR LSPHLTIY+ Q+
Sbjct: 7 SLIRSPALRQGLQMAAASRQVSMKVVSVAE-TQKDESFFEKNERLGRELSPHLTIYQPQL 65
Query: 68 TSVLSITHRGTGVALTAYALGLAGVGLTTDINS 100
TS+LSI HRGTG+AL +G+ G+GL I+S
Sbjct: 66 TSMLSICHRGTGLAL---GVGVWGLGLGALISS 95
>ZFIN|ZDB-GENE-040801-26 [details] [associations]
symbol:sdhc "succinate dehydrogenase complex,
subunit C, integral membrane protein" species:7955 "Danio rerio"
[GO:0006099 "tricarboxylic acid cycle" evidence=IEA] [GO:0000104
"succinate dehydrogenase activity" evidence=IEA] [GO:0016627
"oxidoreductase activity, acting on the CH-CH group of donors"
evidence=IEA] [GO:0045281 "succinate dehydrogenase complex"
evidence=IEA] [GO:0009055 "electron carrier activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR000701
InterPro:IPR014314 InterPro:IPR018495 Pfam:PF01127 PROSITE:PS01000
PROSITE:PS01001 ZFIN:ZDB-GENE-040801-26 GO:GO:0009055 GO:GO:0006099
eggNOG:COG2009 GeneTree:ENSGT00390000000566 HOVERGEN:HBG003187
OMA:VMSICHR OrthoDB:EOG4BCDP5 GO:GO:0000104 InterPro:IPR014361
PIRSF:PIRSF000178 TIGRFAMs:TIGR02970 GO:GO:0045281 EMBL:BX294126
IPI:IPI00618559 UniGene:Dr.1362 SMR:B0S5Q2
Ensembl:ENSDART00000145728 Uniprot:B0S5Q2
Length = 169
Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 30/66 (45%), Positives = 40/66 (60%)
Query: 34 AAPTGVPSKEGHA---VRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTA--YALG 88
A P G S E +N RL RP+SPH+TIYK + +SI+HRGTG+AL++ A
Sbjct: 27 AVPMGTTSNEEMDKFWAKNTRLNRPMSPHMTIYKWSVPMAMSISHRGTGIALSSGISAFA 86
Query: 89 LAGVGL 94
LA + L
Sbjct: 87 LAALVL 92
>UNIPROTKB|D0VWV4 [details] [associations]
symbol:SDHC "Succinate dehydrogenase cytochrome b560
subunit, mitochondrial" species:9823 "Sus scrofa" [GO:0005749
"mitochondrial respiratory chain complex II" evidence=IDA]
[GO:0020037 "heme binding" evidence=IDA] [GO:0005743 "mitochondrial
inner membrane" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006099 "tricarboxylic acid cycle" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0022900 "electron
transport chain" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0009055 "electron carrier activity" evidence=IEA]
[GO:0000104 "succinate dehydrogenase activity" evidence=IEA]
InterPro:IPR000701 InterPro:IPR014314 InterPro:IPR018495
Pfam:PF01127 PROSITE:PS01000 PROSITE:PS01001 UniPathway:UPA00223
GO:GO:0016021 GO:GO:0009055 GO:GO:0046872 GO:GO:0006099
GO:GO:0020037 GO:GO:0022900 GeneTree:ENSGT00390000000566 KO:K00236
OMA:VMSICHR GO:GO:0005749 GO:GO:0000104 InterPro:IPR014361
PIRSF:PIRSF000178 TIGRFAMs:TIGR02970 RefSeq:XP_003125707.2
UniGene:Ssc.23817 PDB:1ZOY PDB:1ZP0 PDB:3ABV PDB:3AE1 PDB:3AE2
PDB:3AE3 PDB:3AE4 PDB:3AE5 PDB:3AE6 PDB:3AE7 PDB:3AE8 PDB:3AE9
PDB:3AEA PDB:3AEB PDB:3AEC PDB:3AED PDB:3AEE PDB:3AEF PDB:3AEG
PDB:3SFD PDB:3SFE PDBsum:1ZOY PDBsum:1ZP0 PDBsum:3ABV PDBsum:3AE1
PDBsum:3AE2 PDBsum:3AE3 PDBsum:3AE4 PDBsum:3AE5 PDBsum:3AE6
PDBsum:3AE7 PDBsum:3AE8 PDBsum:3AE9 PDBsum:3AEA PDBsum:3AEB
PDBsum:3AEC PDBsum:3AED PDBsum:3AEE PDBsum:3AEF PDBsum:3AEG
PDBsum:3SFD PDBsum:3SFE Ensembl:ENSSSCT00000029845 GeneID:100524676
KEGG:ssc:100524676 EvolutionaryTrace:D0VWV4 Uniprot:D0VWV4
Length = 169
Score = 125 (49.1 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 29/62 (46%), Positives = 39/62 (62%)
Query: 34 AAPTGVPSKEG-HAVRNERLG--RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLA 90
A P G +KE N+ LG RPLSPH+TIY+ + +SI HRGTG+AL+A + L
Sbjct: 27 AVPLGTTAKEEMERFWNKNLGSNRPLSPHITIYRWSLPMAMSICHRGTGIALSA-GVSLF 85
Query: 91 GV 92
G+
Sbjct: 86 GL 87
>UNIPROTKB|E2R9X4 [details] [associations]
symbol:SDHC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045281 "succinate dehydrogenase complex"
evidence=IEA] [GO:0009055 "electron carrier activity" evidence=IEA]
[GO:0006099 "tricarboxylic acid cycle" evidence=IEA] [GO:0000104
"succinate dehydrogenase activity" evidence=IEA] InterPro:IPR000701
InterPro:IPR014314 InterPro:IPR018495 Pfam:PF01127 PROSITE:PS01000
PROSITE:PS01001 GO:GO:0009055 GO:GO:0006099
GeneTree:ENSGT00390000000566 OMA:VMSICHR GO:GO:0000104
InterPro:IPR014361 PIRSF:PIRSF000178 TIGRFAMs:TIGR02970
GO:GO:0045281 EMBL:AAEX03018444 Ensembl:ENSCAFT00000020625
Uniprot:E2R9X4
Length = 168
Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 29/62 (46%), Positives = 37/62 (59%)
Query: 34 AAPTGVPSKEGHAV---RNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLA 90
A P G +KE +N L RPLSPH+TIY + +SI HRGTGVAL+A + L
Sbjct: 27 AVPLGTTAKEEMERFWNKNTDLNRPLSPHITIYSWSLPMAMSICHRGTGVALSA-GVSLF 85
Query: 91 GV 92
G+
Sbjct: 86 GL 87
>UNIPROTKB|Q99643 [details] [associations]
symbol:SDHC "Succinate dehydrogenase cytochrome b560
subunit, mitochondrial" species:9606 "Homo sapiens" [GO:0000104
"succinate dehydrogenase activity" evidence=IEA] [GO:0009055
"electron carrier activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006099 "tricarboxylic acid cycle"
evidence=IEA;TAS] [GO:0055114 "oxidation-reduction process"
evidence=TAS] [GO:0009060 "aerobic respiration" evidence=TAS]
[GO:0016021 "integral to membrane" evidence=TAS] [GO:0045273
"respiratory chain complex II" evidence=TAS] [GO:0005739
"mitochondrion" evidence=TAS] [GO:0005743 "mitochondrial inner
membrane" evidence=ISS;TAS] [GO:0020037 "heme binding"
evidence=ISS] [GO:0005749 "mitochondrial respiratory chain complex
II" evidence=ISS] [GO:0022904 "respiratory electron transport
chain" evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] Reactome:REACT_111217 InterPro:IPR000701
InterPro:IPR014314 InterPro:IPR018495 Pfam:PF01127 PROSITE:PS01000
PROSITE:PS01001 UniPathway:UPA00223 GO:GO:0016021 GO:GO:0044281
GO:GO:0009055 GO:GO:0046872 GO:GO:0006099 GO:GO:0020037
EMBL:CH471121 DrugBank:DB00139 GO:GO:0022904 CTD:6391
eggNOG:COG2009 HOGENOM:HOG000160253 HOVERGEN:HBG003187 KO:K00236
OMA:VMSICHR OrthoDB:EOG4BCDP5 GO:GO:0005749 GO:GO:0000104
InterPro:IPR014361 PIRSF:PIRSF000178 TIGRFAMs:TIGR02970 EMBL:U57877
EMBL:D49737 EMBL:AF039594 EMBL:AF039589 EMBL:AF039590 EMBL:AF039591
EMBL:AF039592 EMBL:AF039593 EMBL:AF081495 EMBL:AB201252
EMBL:AB211234 EMBL:AB211235 EMBL:AB212048 EMBL:AK294305
EMBL:AL592295 EMBL:BC020808 EMBL:BC033626 EMBL:BC066329
IPI:IPI00016968 IPI:IPI00655605 IPI:IPI00655681 IPI:IPI00655889
IPI:IPI00943958 RefSeq:NP_001030588.1 RefSeq:NP_001030589.1
RefSeq:NP_001030590.1 RefSeq:NP_002992.1 UniGene:Hs.444472
ProteinModelPortal:Q99643 SMR:Q99643 IntAct:Q99643 STRING:Q99643
PhosphoSite:Q99643 DMDM:5915811 PaxDb:Q99643 PRIDE:Q99643
Ensembl:ENST00000342751 Ensembl:ENST00000367975
Ensembl:ENST00000392169 Ensembl:ENST00000432287
Ensembl:ENST00000513009 GeneID:6391 KEGG:hsa:6391 UCSC:uc001gag.3
UCSC:uc001gah.3 UCSC:uc001gai.3 UCSC:uc001gaj.3 UCSC:uc001gak.3
GeneCards:GC01P161285 HGNC:HGNC:10682 MIM:602413 MIM:605373
MIM:606864 neXtProt:NX_Q99643 Orphanet:97286 Orphanet:44890
Orphanet:29072 PharmGKB:PA35607 InParanoid:Q99643 PhylomeDB:Q99643
BioCyc:MetaCyc:HS07014-MONOMER GenomeRNAi:6391 NextBio:24828
ArrayExpress:Q99643 Bgee:Q99643 CleanEx:HS_SDHC
Genevestigator:Q99643 GermOnline:ENSG00000143252 Uniprot:Q99643
Length = 169
Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 28/62 (45%), Positives = 38/62 (61%)
Query: 34 AAPTGVPSKEG-HAVRNERLG--RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLA 90
A P G +KE N+ +G RPLSPH+TIY + +SI HRGTG+AL+A + L
Sbjct: 27 AVPLGTTAKEEMERFWNKNIGSNRPLSPHITIYSWSLPMAMSICHRGTGIALSA-GVSLF 85
Query: 91 GV 92
G+
Sbjct: 86 GM 87
>MGI|MGI:1913302 [details] [associations]
symbol:Sdhc "succinate dehydrogenase complex, subunit C,
integral membrane protein" species:10090 "Mus musculus" [GO:0000104
"succinate dehydrogenase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IEA] [GO:0006099 "tricarboxylic acid cycle"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0009055
"electron carrier activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016627 "oxidoreductase activity, acting on the CH-CH group of
donors" evidence=IEA] [GO:0022900 "electron transport chain"
evidence=IEA] [GO:0045281 "succinate dehydrogenase complex"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000701 InterPro:IPR014314 InterPro:IPR018495
Pfam:PF01127 PROSITE:PS01000 PROSITE:PS01001 UniPathway:UPA00223
MGI:MGI:1913302 GO:GO:0016021 GO:GO:0009055 GO:GO:0046872
GO:GO:0006099 GO:GO:0020037 GO:GO:0022900 CTD:6391 eggNOG:COG2009
GeneTree:ENSGT00390000000566 HOGENOM:HOG000160253
HOVERGEN:HBG003187 KO:K00236 OMA:VMSICHR OrthoDB:EOG4BCDP5
GO:GO:0005749 GO:GO:0000104 InterPro:IPR014361 PIRSF:PIRSF000178
TIGRFAMs:TIGR02970 EMBL:AK002459 EMBL:AK012818 EMBL:AK032458
EMBL:AK135503 EMBL:BC005779 IPI:IPI00319111 RefSeq:NP_079597.2
UniGene:Mm.198138 ProteinModelPortal:Q9CZB0 SMR:Q9CZB0
IntAct:Q9CZB0 STRING:Q9CZB0 PhosphoSite:Q9CZB0 PaxDb:Q9CZB0
PRIDE:Q9CZB0 Ensembl:ENSMUST00000111336 GeneID:66052 KEGG:mmu:66052
UCSC:uc007dnb.2 InParanoid:Q9CZB0 ChiTaRS:SDHC NextBio:320482
Bgee:Q9CZB0 Genevestigator:Q9CZB0 GermOnline:ENSMUSG00000058076
Uniprot:Q9CZB0
Length = 169
Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 28/62 (45%), Positives = 37/62 (59%)
Query: 34 AAPTGVPSKEGHA---VRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLA 90
AAP G +KE +N RPLSPHLTIYK + LS+ HRG+G+AL+ + L
Sbjct: 27 AAPLGTTAKEEMERFWKKNTSSNRPLSPHLTIYKWSLPMALSVCHRGSGIALSG-GVSLF 85
Query: 91 GV 92
G+
Sbjct: 86 GL 87
>FB|FBgn0037860 [details] [associations]
symbol:CG6629 species:7227 "Drosophila melanogaster"
[GO:0006121 "mitochondrial electron transport, succinate to
ubiquinone" evidence=ISS] [GO:0000104 "succinate dehydrogenase
activity" evidence=ISS] [GO:0006105 "succinate metabolic process"
evidence=ISS] [GO:0006099 "tricarboxylic acid cycle" evidence=ISS]
[GO:0005749 "mitochondrial respiratory chain complex II"
evidence=ISS] InterPro:IPR000701 InterPro:IPR014314 Pfam:PF01127
EMBL:AE014297 GO:GO:0006099 eggNOG:COG2009
GeneTree:ENSGT00390000000566 KO:K00236 GO:GO:0000104
TIGRFAMs:TIGR02970 GO:GO:0045281 EMBL:AY089360 RefSeq:NP_650041.1
UniGene:Dm.5074 SMR:Q9VGT9 IntAct:Q9VGT9 MINT:MINT-1012381
STRING:Q9VGT9 EnsemblMetazoa:FBtr0082380 GeneID:41324
KEGG:dme:Dmel_CG6629 UCSC:CG6629-RA FlyBase:FBgn0037860
InParanoid:Q9VGT9 OMA:YATGYVA OrthoDB:EOG4MGQR2 GenomeRNAi:41324
NextBio:823318 Uniprot:Q9VGT9
Length = 261
Score = 123 (48.4 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 31/84 (36%), Positives = 48/84 (57%)
Query: 21 LLPHIRTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGV 80
L+P + T+ + P P +P + RN LGR LSPHL+IYK+Q+TS LS R +G
Sbjct: 56 LVPPV-TLKVIPFRMPPDLPYDD----RNMLLGRQLSPHLSIYKIQLTSTLSAFLRISGF 110
Query: 81 ALTAYA--LGLAGVGLTTDINSVV 102
L + +G++G+ L D+ +
Sbjct: 111 VLAVFVWFVGISGLCLQGDMEGFI 134
>UNIPROTKB|P35720 [details] [associations]
symbol:SDHC "Succinate dehydrogenase cytochrome b560
subunit, mitochondrial" species:9913 "Bos taurus" [GO:0005743
"mitochondrial inner membrane" evidence=ISS;TAS] [GO:0005749
"mitochondrial respiratory chain complex II" evidence=ISS]
[GO:0020037 "heme binding" evidence=ISS] [GO:0006099 "tricarboxylic
acid cycle" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0022900 "electron transport chain" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009055
"electron carrier activity" evidence=IEA] [GO:0000104 "succinate
dehydrogenase activity" evidence=IEA] Reactome:REACT_115420
InterPro:IPR000701 InterPro:IPR014314 InterPro:IPR018495
Pfam:PF01127 PROSITE:PS01000 PROSITE:PS01001 UniPathway:UPA00223
GO:GO:0016021 GO:GO:0009055 GO:GO:0046872 GO:GO:0006099
GO:GO:0020037 GO:GO:0022900 EMBL:S74803 EMBL:BC102062 EMBL:BT025477
EMBL:M76747 IPI:IPI00700619 PIR:A45159 RefSeq:NP_787008.1
UniGene:Bt.89093 ProteinModelPortal:P35720 SMR:P35720 IntAct:P35720
STRING:P35720 PRIDE:P35720 Ensembl:ENSBTAT00000021075 GeneID:327696
KEGG:bta:327696 CTD:6391 eggNOG:COG2009
GeneTree:ENSGT00390000000566 HOGENOM:HOG000160253
HOVERGEN:HBG003187 InParanoid:P35720 KO:K00236 OMA:VMSICHR
OrthoDB:EOG4BCDP5 NextBio:20810160 GO:GO:0005749 GO:GO:0000104
InterPro:IPR014361 PIRSF:PIRSF000178 TIGRFAMs:TIGR02970
Uniprot:P35720
Length = 169
Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 27/62 (43%), Positives = 37/62 (59%)
Query: 34 AAPTGVPSKEGHA---VRNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLA 90
A P G +KE +N L RPLSPH++IY + +SI HRGTG+AL+A + L
Sbjct: 27 AVPLGTTAKEEMERFWSKNTTLNRPLSPHISIYGWSLPMAMSICHRGTGIALSA-GVSLF 85
Query: 91 GV 92
G+
Sbjct: 86 GL 87
>UNIPROTKB|P70097 [details] [associations]
symbol:SDHC "Succinate dehydrogenase cytochrome b560
subunit, mitochondrial" species:10029 "Cricetulus griseus"
[GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0005749 "mitochondrial respiratory chain complex II"
evidence=ISS] [GO:0020037 "heme binding" evidence=ISS]
InterPro:IPR000701 InterPro:IPR014314 InterPro:IPR018495
Pfam:PF01127 PROSITE:PS01000 PROSITE:PS01001 UniPathway:UPA00223
GO:GO:0016021 GO:GO:0009055 GO:GO:0046872 GO:GO:0006099
GO:GO:0020037 GO:GO:0022900 HOVERGEN:HBG003187 GO:GO:0005749
GO:GO:0000104 InterPro:IPR014361 PIRSF:PIRSF000178
TIGRFAMs:TIGR02970 EMBL:U31241 RefSeq:NP_001233755.1
ProteinModelPortal:P70097 SMR:P70097 GeneID:100689402
Uniprot:P70097
Length = 169
Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 28/62 (45%), Positives = 37/62 (59%)
Query: 34 AAPTGVPSKEGHAV---RNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLA 90
A P G +KE +N RP+SPHLTIY+ + V+SI HRGTGVAL+ + L
Sbjct: 27 AVPLGTTAKEEMERFWNKNTSSKRPVSPHLTIYRWSLPMVMSICHRGTGVALSG-GVSLF 85
Query: 91 GV 92
G+
Sbjct: 86 GL 87
>DICTYBASE|DDB_G0275115 [details] [associations]
symbol:sdhC "succinate dehydrogenase (ubiquinone)"
species:44689 "Dictyostelium discoideum" [GO:0045281 "succinate
dehydrogenase complex" evidence=IEA] [GO:0016627 "oxidoreductase
activity, acting on the CH-CH group of donors" evidence=IEA]
[GO:0006099 "tricarboxylic acid cycle" evidence=IEA;ISS]
[GO:0000104 "succinate dehydrogenase activity" evidence=IEA]
[GO:0020037 "heme binding" evidence=ISS] [GO:0006121 "mitochondrial
electron transport, succinate to ubiquinone" evidence=ISS]
[GO:0005749 "mitochondrial respiratory chain complex II"
evidence=ISS] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA;ISS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0022900 "electron transport chain" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000701
InterPro:IPR014314 Pfam:PF01127 PROSITE:PS01000 PROSITE:PS01001
UniPathway:UPA00223 dictyBase:DDB_G0275115 GO:GO:0016021
GO:GO:0046872 GenomeReviews:CM000151_GR GO:GO:0006099 GO:GO:0020037
EMBL:AAFI02000013 eggNOG:COG2009 KO:K00236 GO:GO:0005749
GO:GO:0000104 TIGRFAMs:TIGR02970 GO:GO:0006121 RefSeq:XP_643757.1
ProteinModelPortal:Q8T2T5 STRING:Q8T2T5 PRIDE:Q8T2T5
EnsemblProtists:DDB0231385 GeneID:8619802 KEGG:ddi:DDB_G0275115
OMA:TITEKRI ProtClustDB:CLSZ2430978 Uniprot:Q8T2T5
Length = 192
Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 23/41 (56%), Positives = 28/41 (68%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGL 94
+P SPHLTIYK + +V+SI HR TG+ L GLAGV L
Sbjct: 71 QPTSPHLTIYKFPLPAVMSIMHRATGICLALGITGLAGVTL 111
>RGD|1359454 [details] [associations]
symbol:Sdhc "succinate dehydrogenase complex, subunit C,
integral membrane protein" species:10116 "Rattus norvegicus"
[GO:0000104 "succinate dehydrogenase activity" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006099 "tricarboxylic acid cycle"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0009055 "electron carrier activity" evidence=IEA] [GO:0045281
"succinate dehydrogenase complex" evidence=IEA] InterPro:IPR000701
InterPro:IPR014314 InterPro:IPR018495 Pfam:PF01127 PROSITE:PS01000
PROSITE:PS01001 RGD:1359454 GO:GO:0005739 GO:GO:0009055
GO:GO:0006099 CTD:6391 eggNOG:COG2009 GeneTree:ENSGT00390000000566
HOGENOM:HOG000160253 HOVERGEN:HBG003187 KO:K00236 OrthoDB:EOG4BCDP5
GO:GO:0000104 InterPro:IPR014361 PIRSF:PIRSF000178
TIGRFAMs:TIGR02970 GO:GO:0045281 EMBL:CH473985 EMBL:BC082027
IPI:IPI00371518 RefSeq:NP_001005534.1 UniGene:Rn.1698 SMR:Q641Z9
STRING:Q641Z9 Ensembl:ENSRNOT00000004228 GeneID:289217
KEGG:rno:289217 UCSC:RGD:1359454 InParanoid:Q641Z9 NextBio:629396
Genevestigator:Q641Z9 Uniprot:Q641Z9
Length = 169
Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 34 AAPTGVPSKEGHAV---RNERLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLA 90
AAP G +KE A +N RP+SPHLTIY+ + +S+ HRG+G+A++ + L
Sbjct: 27 AAPLGTTAKEEMARFWNKNTSSNRPVSPHLTIYRWSLPMAMSVCHRGSGIAMSG-GVSLF 85
Query: 91 GV 92
G+
Sbjct: 86 GL 87
>TIGR_CMR|APH_0999 [details] [associations]
symbol:APH_0999 "succinate dehydrogenase, cytochrome b556
subunit" species:212042 "Anaplasma phagocytophilum HZ" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0009055 "electron
carrier activity" evidence=ISS] [GO:0045282 "plasma membrane
succinate dehydrogenase complex" evidence=ISS] InterPro:IPR000701
InterPro:IPR014314 InterPro:IPR018495 Pfam:PF01127 PROSITE:PS01000
PROSITE:PS01001 GO:GO:0009055 GO:GO:0006099 EMBL:CP000235
GenomeReviews:CP000235_GR eggNOG:COG2009 HOGENOM:HOG000160253
GO:GO:0000104 InterPro:IPR014361 PIRSF:PIRSF000178
TIGRFAMs:TIGR02970 GO:GO:0045281 KO:K00241 OMA:WALMHHM
RefSeq:YP_505561.1 ProteinModelPortal:Q2GJ90 STRING:Q2GJ90
GeneID:3930141 KEGG:aph:APH_0999 PATRIC:20950734
ProtClustDB:CLSK747292 BioCyc:APHA212042:GHPM-1008-MONOMER
Uniprot:Q2GJ90
Length = 127
Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 22/29 (75%), Positives = 25/29 (86%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVAL 82
RPLSPHL++YKL IT+ LSITHR TGV L
Sbjct: 5 RPLSPHLSVYKLPITAWLSITHRITGVLL 33
>ASPGD|ASPL0000076613 [details] [associations]
symbol:carC species:162425 "Emericella nidulans"
[GO:0008177 "succinate dehydrogenase (ubiquinone) activity"
evidence=IEA;RCA] [GO:0035690 "cellular response to drug"
evidence=IEA] [GO:0006099 "tricarboxylic acid cycle" evidence=RCA]
[GO:0045282 "plasma membrane succinate dehydrogenase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR000701 InterPro:IPR014314 InterPro:IPR018495
Pfam:PF01127 PROSITE:PS01000 PROSITE:PS01001 GO:GO:0009055
GO:GO:0006099 EMBL:BN001303 EMBL:AACD01000161 eggNOG:COG2009
HOGENOM:HOG000160253 KO:K00236 GO:GO:0000104 TIGRFAMs:TIGR02970
OMA:GWHLESA GO:GO:0045281 OrthoDB:EOG4TXG2C RefSeq:XP_682062.1
ProteinModelPortal:Q5ASD7 STRING:Q5ASD7
EnsemblFungi:CADANIAT00006269 GeneID:2868433 KEGG:ani:AN8793.2
Uniprot:Q5ASD7
Length = 191
Score = 107 (42.7 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 5 FKLSTLCNPIASSHLRLLPHIRTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYK 64
+ L +P A + R + I+T + T P+K + +RL RP+SPHLTIY+
Sbjct: 24 WSLMNAASPAAVAMGRNVQKIQT-RFAATSTTTSDPNK---ILVEQRLRRPVSPHLTIYR 79
Query: 65 LQITSVLSITHRGTGVALT 83
QIT +S HR TG+ L+
Sbjct: 80 PQITWYMSALHRVTGIILS 98
>CGD|CAL0004732 [details] [associations]
symbol:orf19.1480 species:5476 "Candida albicans" [GO:0006099
"tricarboxylic acid cycle" evidence=NAS] [GO:0000104 "succinate
dehydrogenase activity" evidence=NAS] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR000701 InterPro:IPR014314 InterPro:IPR018495
Pfam:PF01127 PROSITE:PS01000 PROSITE:PS01001 CGD:CAL0004732
GO:GO:0005886 GO:GO:0009055 GO:GO:0006099 EMBL:AACQ01000008
EMBL:AACQ01000007 eggNOG:COG2009 HOGENOM:HOG000160253 KO:K00236
GO:GO:0000104 InterPro:IPR014361 PIRSF:PIRSF000178
TIGRFAMs:TIGR02970 GO:GO:0045281 RefSeq:XP_722390.1
RefSeq:XP_722529.1 ProteinModelPortal:Q5ALU6 STRING:Q5ALU6
GeneID:3635728 GeneID:3636002 KEGG:cal:CaO19.1480
KEGG:cal:CaO19.9055 Uniprot:Q5ALU6
Length = 176
Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 32/99 (32%), Positives = 49/99 (49%)
Query: 4 IFKLSTLCNPIASSHLRLLPHIRTITIKPVAAPTGVPS-KEGHAVRNERLGRPLSPHLTI 62
I ++ L P S+ + T+ +K + S +E + +R RP SPHL I
Sbjct: 2 ISRIGLLKRPTVSTLNNYVKLQSTLALKRYTSTVPATSNQEQEILVAQRKNRPTSPHLQI 61
Query: 63 YKLQITSVLSITHRGTGVALTA--YALGLAGVGLTTDIN 99
Y+ Q+T ++S HR TGVA+ YAL G T+ +N
Sbjct: 62 YEPQLTWIMSSFHRITGVAMAGAFYAL-TCGFAATSILN 99
>UNIPROTKB|Q5ALU6 [details] [associations]
symbol:CaO19.1480 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0000104 "succinate
dehydrogenase activity" evidence=NAS] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0006099 "tricarboxylic acid cycle" evidence=NAS]
InterPro:IPR000701 InterPro:IPR014314 InterPro:IPR018495
Pfam:PF01127 PROSITE:PS01000 PROSITE:PS01001 CGD:CAL0004732
GO:GO:0005886 GO:GO:0009055 GO:GO:0006099 EMBL:AACQ01000008
EMBL:AACQ01000007 eggNOG:COG2009 HOGENOM:HOG000160253 KO:K00236
GO:GO:0000104 InterPro:IPR014361 PIRSF:PIRSF000178
TIGRFAMs:TIGR02970 GO:GO:0045281 RefSeq:XP_722390.1
RefSeq:XP_722529.1 ProteinModelPortal:Q5ALU6 STRING:Q5ALU6
GeneID:3635728 GeneID:3636002 KEGG:cal:CaO19.1480
KEGG:cal:CaO19.9055 Uniprot:Q5ALU6
Length = 176
Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 32/99 (32%), Positives = 49/99 (49%)
Query: 4 IFKLSTLCNPIASSHLRLLPHIRTITIKPVAAPTGVPS-KEGHAVRNERLGRPLSPHLTI 62
I ++ L P S+ + T+ +K + S +E + +R RP SPHL I
Sbjct: 2 ISRIGLLKRPTVSTLNNYVKLQSTLALKRYTSTVPATSNQEQEILVAQRKNRPTSPHLQI 61
Query: 63 YKLQITSVLSITHRGTGVALTA--YALGLAGVGLTTDIN 99
Y+ Q+T ++S HR TGVA+ YAL G T+ +N
Sbjct: 62 YEPQLTWIMSSFHRITGVAMAGAFYAL-TCGFAATSILN 99
>POMBASE|SPCC330.12c [details] [associations]
symbol:sdh3 "succinate dehydrogenase (ubiquinone)
cytochrome b subunit (predicted)" species:4896 "Schizosaccharomyces
pombe" [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005749
"mitochondrial respiratory chain complex II" evidence=ISS]
[GO:0006099 "tricarboxylic acid cycle" evidence=IEA] [GO:0006105
"succinate metabolic process" evidence=IC] [GO:0006121
"mitochondrial electron transport, succinate to ubiquinone"
evidence=ISS] [GO:0008177 "succinate dehydrogenase (ubiquinone)
activity" evidence=ISS] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000701 InterPro:IPR014314 Pfam:PF01127
UniPathway:UPA00223 PomBase:SPCC330.12c GO:GO:0016021 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0046872 GO:GO:0006099
eggNOG:COG2009 HOGENOM:HOG000160253 KO:K00236 OMA:VMSICHR
GO:GO:0005749 InterPro:IPR014361 PIRSF:PIRSF000178
TIGRFAMs:TIGR02970 GO:GO:0006121 GO:GO:0008177 GO:GO:0006105
PIR:T41322 RefSeq:NP_587712.1 ProteinModelPortal:O74882
STRING:O74882 EnsemblFungi:SPCC330.12c.1 GeneID:2539100
KEGG:spo:SPCC330.12c OrthoDB:EOG4TXG2C NextBio:20800272
Uniprot:O74882
Length = 180
Score = 105 (42.0 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 35/95 (36%), Positives = 53/95 (55%)
Query: 25 IRTITIKPVAAPTGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTG--VA- 81
+R + + +A ++ + ++R+ RP SPHLTIY+ Q+T LS HR TG VA
Sbjct: 29 LRNVWRRSIATEHLTQTEANSRLASQRVHRPNSPHLTIYEPQLTWYLSSLHRITGCVVAG 88
Query: 82 -LTAYALG-----LAGVGL-TTDINSV---VPTYL 106
L A+A+G LAG L T I+ + VPT++
Sbjct: 89 TLYAFAMGYLVAPLAGYSLDTATISGLIQQVPTWI 123
>SGD|S000001624 [details] [associations]
symbol:SDH3 "Subunit of both succinate dehydrogenase and of
TIM22 translocase" species:4932 "Saccharomyces cerevisiae"
[GO:0006121 "mitochondrial electron transport, succinate to
ubiquinone" evidence=TAS] [GO:0016021 "integral to membrane"
evidence=ISM;IEA] [GO:0042721 "mitochondrial inner membrane protein
insertion complex" evidence=IDA] [GO:0006099 "tricarboxylic acid
cycle" evidence=IEA;TAS] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0045333 "cellular respiration" evidence=IMP]
[GO:0009055 "electron carrier activity" evidence=IEA] [GO:0000104
"succinate dehydrogenase activity" evidence=IEA] [GO:0016627
"oxidoreductase activity, acting on the CH-CH group of donors"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005749
"mitochondrial respiratory chain complex II" evidence=IDA]
[GO:0045039 "protein import into mitochondrial inner membrane"
evidence=IMP] [GO:0048038 "quinone binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0022900 "electron
transport chain" evidence=IEA] [GO:0008177 "succinate dehydrogenase
(ubiquinone) activity" evidence=IGI] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] InterPro:IPR000701 InterPro:IPR018495
Pfam:PF01127 PROSITE:PS01000 PROSITE:PS01001 UniPathway:UPA00223
SGD:S000001624 GO:GO:0016021 GO:GO:0009055 GO:GO:0046872
GO:GO:0006099 EMBL:BK006944 GO:GO:0048038 eggNOG:COG2009
HOGENOM:HOG000160253 KO:K00236 GO:GO:0005749 GO:GO:0000104
GO:GO:0006121 PDB:1ORZ PDB:1PB4 PDBsum:1ORZ PDBsum:1PB4
GO:GO:0042721 GO:GO:0045039 EMBL:Z25464 OrthoDB:EOG4TXG2C
EMBL:X73884 EMBL:Z28141 EMBL:AY693024 PIR:S37970 RefSeq:NP_012781.1
ProteinModelPortal:P33421 SMR:P33421 DIP:DIP-5310N IntAct:P33421
MINT:MINT-502608 STRING:P33421 PaxDb:P33421 PeptideAtlas:P33421
EnsemblFungi:YKL141W GeneID:853716 KEGG:sce:YKL141W CYGD:YKL141w
GeneTree:ENSGT00510000053031 OMA:SVHRISH NextBio:974731
Genevestigator:P33421 GermOnline:YKL141W Uniprot:P33421
Length = 198
Score = 102 (41.0 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 32/84 (38%), Positives = 42/84 (50%)
Query: 25 IRTITIKPVAAP--TGVPSKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHR------ 76
+ T +K VA+ T E + +R RP+SPHLTIY+ Q+T LS HR
Sbjct: 44 LSTSPLKNVASEMNTKAAIAEEQILNKQRAKRPISPHLTIYQPQLTWYLSSLHRISLVLM 103
Query: 77 GTGVALTAYALG---LAGVGLTTD 97
G G L G L G+GLTT+
Sbjct: 104 GLGFYLFTILFGVSGLLGLGLTTE 127
>SGD|S000004724 [details] [associations]
symbol:SHH3 "Putative mitochondrial inner membrane protein of
unknown function" species:4932 "Saccharomyces cerevisiae"
[GO:0045281 "succinate dehydrogenase complex" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0048038 "quinone binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA;ISM] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0006099 "tricarboxylic acid
cycle" evidence=IEA] [GO:0022900 "electron transport chain"
evidence=IEA] [GO:0000104 "succinate dehydrogenase activity"
evidence=IEA] [GO:0009055 "electron carrier activity" evidence=IEA]
[GO:0016627 "oxidoreductase activity, acting on the CH-CH group of
donors" evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000701
InterPro:IPR014314 InterPro:IPR018495 Pfam:PF01127 PROSITE:PS01000
PROSITE:PS01001 SGD:S000004724 GO:GO:0016021 GO:GO:0005743
GO:GO:0009055 GO:GO:0046872 GO:GO:0006099 GO:GO:0022900
EMBL:BK006946 GO:GO:0048038 EMBL:Z49702 eggNOG:COG2009
HOGENOM:HOG000160253 KO:K00236 GO:GO:0000104 TIGRFAMs:TIGR02970
GO:GO:0045281 OrthoDB:EOG4TXG2C GeneTree:ENSGT00510000053031
EMBL:AY557968 PIR:S54580 RefSeq:NP_013836.1
ProteinModelPortal:Q04487 SMR:Q04487 DIP:DIP-5316N MINT:MINT-534886
STRING:Q04487 EnsemblFungi:YMR118C GeneID:855145 KEGG:sce:YMR118C
CYGD:YMR118c OMA:FVPRIST NextBio:978543 Genevestigator:Q04487
GermOnline:YMR118C Uniprot:Q04487
Length = 196
Score = 98 (39.6 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 24/58 (41%), Positives = 38/58 (65%)
Query: 41 SKEGHAVRNERLGRPLSPHLTIYKLQITSVLSITHRGTGV--ALTAYALGLAGVGLTT 96
+KE + ++R RP+SPHLT+Y+ +++ LS HR +GV AL YA + +G+TT
Sbjct: 60 NKEEELLVSQRKKRPISPHLTVYEPEMSWYLSSLHRISGVLLALGFYAFTIT-LGVTT 116
>TIGR_CMR|SPO_0358 [details] [associations]
symbol:SPO_0358 "succinate dehydrogenase, cytochrome b556
subunit" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0009055 "electron
carrier activity" evidence=ISS] [GO:0045282 "plasma membrane
succinate dehydrogenase complex" evidence=ISS] InterPro:IPR000701
InterPro:IPR014314 InterPro:IPR018495 Pfam:PF01127 PROSITE:PS01001
GO:GO:0009055 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006099
HOGENOM:HOG000160253 GO:GO:0000104 InterPro:IPR014361
PIRSF:PIRSF000178 TIGRFAMs:TIGR02970 GO:GO:0045281 KO:K00241
OMA:WALMHHM RefSeq:YP_165621.1 ProteinModelPortal:Q5LXF0
GeneID:3196468 KEGG:sil:SPO0358 PATRIC:23373975
ProtClustDB:CLSK933241 Uniprot:Q5LXF0
Length = 128
Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 22/37 (59%), Positives = 26/37 (70%)
Query: 51 RLGRPLSPHLTIYKLQITSVLSITHRGTGVALTAYAL 87
R RPLSPHL+IY+ Q+TS+ SI R TG AL AL
Sbjct: 6 RGNRPLSPHLSIYRPQLTSITSILTRITGNALLFAAL 42
>TAIR|locus:2116520 [details] [associations]
symbol:SDH3-2 "succinate dehydrogenase 3-2" species:3702
"Arabidopsis thaliana" [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016627 "oxidoreductase activity, acting on the CH-CH group of
donors" evidence=IEA] [GO:0000104 "succinate dehydrogenase
activity" evidence=TAS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005749 "mitochondrial respiratory chain complex II"
evidence=ISS;IDA] [GO:0006121 "mitochondrial electron transport,
succinate to ubiquinone" evidence=TAS] [GO:0016020 "membrane"
evidence=ISS] InterPro:IPR000701 Pfam:PF01127 EMBL:CP002688
EMBL:CP002687 EMBL:AL353994 GO:GO:0005749 GO:GO:0000104
GO:GO:0006121 EMBL:AY070732 EMBL:AY074861 EMBL:BT010154
EMBL:BK000034 EMBL:BK000035 IPI:IPI00519890 PIR:T49938
RefSeq:NP_001190268.1 RefSeq:NP_194948.2 RefSeq:NP_196522.1
UniGene:At.26674 UniGene:At.48927 UniGene:At.68794
ProteinModelPortal:Q9LXC4 SMR:Q9LXC4 IntAct:Q9LXC4 PRIDE:Q9LXC4
EnsemblPlants:AT4G32210.1 EnsemblPlants:AT5G09600.1
EnsemblPlants:AT5G09600.3 GeneID:3770570 GeneID:830819
KEGG:ath:AT4G32210 KEGG:ath:AT5G09600 TAIR:At4g32210 TAIR:At5g09600
InParanoid:Q9LXC4 OMA:HTIKSTH PhylomeDB:Q9LXC4 ProtClustDB:PLN00130
Genevestigator:Q9LXC4 Uniprot:Q9LXC4
Length = 213
Score = 93 (37.8 bits), Expect = 0.00027, P = 0.00027
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVPTY 105
RPLSPHL++Y+ Q+ S+LSI +R +GV LT AG L + + TY
Sbjct: 125 RPLSPHLSVYQPQMNSMLSIFNRISGVYLTGVTF--AGYLLYLKMGMICLTY 174
>TAIR|locus:2144816 [details] [associations]
symbol:SDH3-1 "succinate dehydrogenase 3-1" species:3702
"Arabidopsis thaliana" [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016627 "oxidoreductase activity, acting on the CH-CH group of
donors" evidence=IEA] [GO:0000104 "succinate dehydrogenase
activity" evidence=TAS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005749 "mitochondrial respiratory chain complex II"
evidence=ISS;IDA] [GO:0006121 "mitochondrial electron transport,
succinate to ubiquinone" evidence=TAS] [GO:0016020 "membrane"
evidence=ISS] InterPro:IPR000701 Pfam:PF01127 EMBL:CP002688
EMBL:CP002687 EMBL:AL353994 GO:GO:0005749 GO:GO:0000104
GO:GO:0006121 EMBL:AY070732 EMBL:AY074861 EMBL:BT010154
EMBL:BK000034 EMBL:BK000035 IPI:IPI00519890 PIR:T49938
RefSeq:NP_001190268.1 RefSeq:NP_194948.2 RefSeq:NP_196522.1
UniGene:At.26674 UniGene:At.48927 UniGene:At.68794
ProteinModelPortal:Q9LXC4 SMR:Q9LXC4 IntAct:Q9LXC4 PRIDE:Q9LXC4
EnsemblPlants:AT4G32210.1 EnsemblPlants:AT5G09600.1
EnsemblPlants:AT5G09600.3 GeneID:3770570 GeneID:830819
KEGG:ath:AT4G32210 KEGG:ath:AT5G09600 TAIR:At4g32210 TAIR:At5g09600
InParanoid:Q9LXC4 OMA:HTIKSTH PhylomeDB:Q9LXC4 ProtClustDB:PLN00130
Genevestigator:Q9LXC4 Uniprot:Q9LXC4
Length = 213
Score = 93 (37.8 bits), Expect = 0.00027, P = 0.00027
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 54 RPLSPHLTIYKLQITSVLSITHRGTGVALTAYALGLAGVGLTTDINSVVPTY 105
RPLSPHL++Y+ Q+ S+LSI +R +GV LT AG L + + TY
Sbjct: 125 RPLSPHLSVYQPQMNSMLSIFNRISGVYLTGVTF--AGYLLYLKMGMICLTY 174
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.392 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 106 106 0.00091 102 3 11 22 0.41 30
29 0.39 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 21
No. of states in DFA: 482 (51 KB)
Total size of DFA: 90 KB (2067 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 11.67u 0.12s 11.79t Elapsed: 00:00:01
Total cpu time: 11.67u 0.12s 11.79t Elapsed: 00:00:01
Start: Thu Aug 15 14:02:20 2013 End: Thu Aug 15 14:02:21 2013