BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy9436
MIAVALSIEDTRLATLVTEKTTSTKRNIGHFDRKRKQARHESKIRAVEKLELFSIENARN
QSESMTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRTVCLKPGRSYCSVGRIS
HEVGWKYKTIVRHLERKRREKSIEKIKLHTVYLIPCLDCESNLTKKAGKQVKKATFPLTK
QINTFGYK

High Scoring Gene Products

Symbol, full name Information P value
MGG_05449
60S ribosomal protein L16
protein from Magnaporthe oryzae 70-15 4.4e-20
RpL13A
Ribosomal protein L13A
protein from Drosophila melanogaster 4.0e-19
RPL16A gene_product from Candida albicans 5.8e-18
RPL16A
Likely cytosolic ribosomal protein L16
protein from Candida albicans SC5314 5.8e-18
RPL13A
60S ribosomal protein L13a
protein from Bos taurus 1.6e-17
rpl13a
ribosomal protein L13a
gene_product from Danio rerio 2.0e-17
RPL13A
60S ribosomal protein L13a
protein from Canis lupus familiaris 6.7e-17
RPL13A
60S ribosomal protein L13a
protein from Canis lupus familiaris 6.7e-17
RPL13A
60S ribosomal protein L13a
protein from Homo sapiens 6.7e-17
RPL13A
60S ribosomal protein L13a
protein from Sus scrofa 6.7e-17
RPL13A
60S ribosomal protein L13a
protein from Macaca fascicularis 6.7e-17
RPL13A
60S ribosomal protein L13a
protein from Pongo abelii 6.7e-17
Rpl13a
ribosomal protein L13A
protein from Mus musculus 1.1e-16
Rpl13a
ribosomal protein L13A
gene from Rattus norvegicus 1.1e-16
Rpl13a
RCG53885, isoform CRA_d
protein from Rattus norvegicus 1.1e-16
RPL16A
Ribosomal 60S subunit protein L16A
gene from Saccharomyces cerevisiae 1.1e-16
RPL16B
Ribosomal 60S subunit protein L16B
gene from Saccharomyces cerevisiae 1.4e-16
AT4G13170 protein from Arabidopsis thaliana 2.0e-15
AT3G24830 protein from Arabidopsis thaliana 2.6e-15
AT3G07110 protein from Arabidopsis thaliana 6.9e-15
AT5G48760 protein from Arabidopsis thaliana 6.9e-15
rpl-16 gene from Caenorhabditis elegans 8.8e-15
E2QS54
Uncharacterized protein
protein from Canis lupus familiaris 3.0e-14
rpl13a
S60 ribosomal protein L13a
gene from Dictyostelium discoideum 1.0e-13
Q6NVV1
Putative 60S ribosomal protein L13a-like MGC87657
protein from Homo sapiens 1.9e-12
G3MXM1
Uncharacterized protein
protein from Bos taurus 2.4e-12
PF10_0043
ribosomal protein L13, putative
gene from Plasmodium falciparum 3.9e-12
PF10_0043
60S ribosomal protein L13, putative
protein from Plasmodium falciparum 3D7 3.9e-12
I3L8K3
Uncharacterized protein
protein from Sus scrofa 3.5e-11
RPL13A
60S ribosomal protein L13a
protein from Sus scrofa 2.2e-09
F6UMX6
Uncharacterized protein
protein from Canis lupus familiaris 1.7e-05
I3LN23
Uncharacterized protein
protein from Sus scrofa 9.9e-05

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy9436
        (188 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

ASPGD|ASPL0000014757 - symbol:rpl16a species:162425 "Emer...   246  6.3e-21   1
UNIPROTKB|G4MLS0 - symbol:MGG_05449 "60S ribosomal protei...   238  4.4e-20   1
FB|FBgn0037351 - symbol:RpL13A "Ribosomal protein L13A" s...   229  4.0e-19   1
CGD|CAL0005216 - symbol:RPL16A species:5476 "Candida albi...   218  5.8e-18   1
UNIPROTKB|Q5AB87 - symbol:RPL16A "Likely cytosolic riboso...   218  5.8e-18   1
POMBASE|SPBC2G2.05 - symbol:rpl1603 "60S ribosomal protei...   218  5.8e-18   1
UNIPROTKB|Q3SZ90 - symbol:RPL13A "60S ribosomal protein L...   214  1.6e-17   1
POMBASE|SPAC23A1.11 - symbol:rpl1602 "60S ribosomal prote...   214  1.6e-17   1
POMBASE|SPBC839.13c - symbol:rpl1601 "60S ribosomal prote...   214  1.6e-17   1
ZFIN|ZDB-GENE-030131-168 - symbol:rpl13a "ribosomal prote...   213  2.0e-17   1
UNIPROTKB|F1PI16 - symbol:RPL13A "60S ribosomal protein L...   208  6.7e-17   1
UNIPROTKB|Q9XSU0 - symbol:RPL13A "60S ribosomal protein L...   208  6.7e-17   1
UNIPROTKB|P40429 - symbol:RPL13A "60S ribosomal protein L...   208  6.7e-17   1
UNIPROTKB|F1RI01 - symbol:RPL13A "60S ribosomal protein L...   208  6.7e-17   1
UNIPROTKB|Q4R8Z2 - symbol:RPL13A "60S ribosomal protein L...   208  6.7e-17   1
UNIPROTKB|Q5RA38 - symbol:RPL13A "60S ribosomal protein L...   208  6.7e-17   1
MGI|MGI:1351455 - symbol:Rpl13a "ribosomal protein L13A" ...   206  1.1e-16   1
RGD|628697 - symbol:Rpl13a "ribosomal protein L13A" speci...   206  1.1e-16   1
UNIPROTKB|Q5RK10 - symbol:Rpl13a "Neuroprotective protein...   206  1.1e-16   1
SGD|S000001395 - symbol:RPL16A "Ribosomal 60S subunit pro...   206  1.1e-16   1
SGD|S000005013 - symbol:RPL16B "Ribosomal 60S subunit pro...   205  1.4e-16   1
TAIR|locus:2119335 - symbol:AT4G13170 species:3702 "Arabi...   194  2.0e-15   1
TAIR|locus:2087268 - symbol:AT3G24830 species:3702 "Arabi...   193  2.6e-15   1
TAIR|locus:2098530 - symbol:AT3G07110 species:3702 "Arabi...   189  6.9e-15   1
TAIR|locus:2156569 - symbol:AT5G48760 species:3702 "Arabi...   189  6.9e-15   1
WB|WBGene00004428 - symbol:rpl-16 species:6239 "Caenorhab...   188  8.8e-15   1
UNIPROTKB|E2QS54 - symbol:E2QS54 "Uncharacterized protein...   183  3.0e-14   1
DICTYBASE|DDB_G0275881 - symbol:rpl13a "S60 ribosomal pro...   178  1.0e-13   1
UNIPROTKB|Q6NVV1 - symbol:Q6NVV1 "Putative 60S ribosomal ...   166  1.9e-12   1
UNIPROTKB|G3MXM1 - symbol:G3MXM1 "Uncharacterized protein...   165  2.4e-12   1
GENEDB_PFALCIPARUM|PF10_0043 - symbol:PF10_0043 "ribosoma...   163  3.9e-12   1
UNIPROTKB|Q8IJZ7 - symbol:PF10_0043 "60S ribosomal protei...   163  3.9e-12   1
UNIPROTKB|I3L8K3 - symbol:I3L8K3 "Uncharacterized protein...   154  3.5e-11   1
UNIPROTKB|Q95307 - symbol:RPL13A "60S ribosomal protein L...   137  2.2e-09   1
UNIPROTKB|F6UMX6 - symbol:F6UMX6 "Uncharacterized protein...   101  1.7e-05   1
UNIPROTKB|I3LN23 - symbol:I3LN23 "Uncharacterized protein...   109  9.9e-05   1


>ASPGD|ASPL0000014757 [details] [associations]
            symbol:rpl16a species:162425 "Emericella nidulans"
            [GO:0003735 "structural constituent of ribosome" evidence=TAS]
            [GO:0006412 "translation" evidence=TAS] [GO:0022625 "cytosolic
            large ribosomal subunit" evidence=TAS] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023563
            InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
            GO:GO:0006412 EMBL:BN001302 GO:GO:0003735 EMBL:AACD01000068
            GO:GO:0015934 HOGENOM:HOG000225289 KO:K02872 OMA:RSAEYYA
            Gene3D:3.90.1180.10 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
            SUPFAM:SSF52161 TIGRFAMs:TIGR01077 RefSeq:XP_661806.1
            ProteinModelPortal:G5EB54 SMR:G5EB54 EnsemblFungi:CADANIAT00004462
            GeneID:2873625 KEGG:ani:AN4202.2 Uniprot:G5EB54
        Length = 202

 Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
 Identities = 43/70 (61%), Positives = 56/70 (80%)

Query:    65 MTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRTVCLKPGRSYCSVGRISHEVG 124
             M PHK  RGA AL+RLKV+EG+PP Y +++R+ VP ALR + L+PGR YC+VGR+SHEVG
Sbjct:    89 MIPHKTARGAAALERLKVFEGVPPPYDKKKRVVVPQALRVLRLRPGRKYCTVGRLSHEVG 148

Query:   125 WKYKTIVRHL 134
             WKY+ +V  L
Sbjct:   149 WKYQDVVARL 158


>UNIPROTKB|G4MLS0 [details] [associations]
            symbol:MGG_05449 "60S ribosomal protein L16" species:242507
            "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
            evidence=IEP] InterPro:IPR005755 InterPro:IPR005822
            InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 GO:GO:0006412
            GO:GO:0003735 EMBL:CM001231 GO:GO:0043581 GO:GO:0015934 KO:K02872
            Gene3D:3.90.1180.10 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
            SUPFAM:SSF52161 TIGRFAMs:TIGR01077 RefSeq:XP_003710310.1
            ProteinModelPortal:G4MLS0 SMR:G4MLS0 EnsemblFungi:MGG_05449T0
            GeneID:2675933 KEGG:mgr:MGG_05449 Uniprot:G4MLS0
        Length = 202

 Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
 Identities = 41/70 (58%), Positives = 55/70 (78%)

Query:    65 MTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRTVCLKPGRSYCSVGRISHEVG 124
             M PHK  RG  AL+RLKV+EG+PP Y +++++ VP ALR + L+PGR YC+VGR+SHEVG
Sbjct:    89 MMPHKTARGTAALERLKVFEGVPPPYDKQKKMVVPQALRVLRLQPGRKYCTVGRLSHEVG 148

Query:   125 WKYKTIVRHL 134
             WKY+ +V  L
Sbjct:   149 WKYQDVVARL 158


>FB|FBgn0037351 [details] [associations]
            symbol:RpL13A "Ribosomal protein L13A" species:7227
            "Drosophila melanogaster" [GO:0022625 "cytosolic large ribosomal
            subunit" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            [GO:0003735 "structural constituent of ribosome" evidence=ISS;IDA]
            [GO:0007219 "Notch signaling pathway" evidence=IGI] [GO:0008407
            "chaeta morphogenesis" evidence=IMP] [GO:0005840 "ribosome"
            evidence=IDA] [GO:0051298 "centrosome duplication" evidence=IMP]
            InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023563
            InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
            EMBL:AE014297 GO:GO:0051298 GO:GO:0006412 GO:GO:0007219
            GO:GO:0005840 GO:GO:0003735 GO:GO:0008407 GO:GO:0015934
            eggNOG:COG0102 KO:K02872 Gene3D:3.90.1180.10 PANTHER:PTHR11545
            PANTHER:PTHR11545:SF3 SUPFAM:SSF52161 TIGRFAMs:TIGR01077
            OMA:FYRNKIK CTD:23521 GeneTree:ENSGT00390000010799 EMBL:AY051640
            RefSeq:NP_649560.1 UniGene:Dm.4531 ProteinModelPortal:Q9VNE9
            SMR:Q9VNE9 DIP:DIP-19002N IntAct:Q9VNE9 MINT:MINT-790225
            STRING:Q9VNE9 PaxDb:Q9VNE9 PRIDE:Q9VNE9 EnsemblMetazoa:FBtr0078705
            GeneID:40687 KEGG:dme:Dmel_CG1475 FlyBase:FBgn0037351
            InParanoid:Q9VNE9 OrthoDB:EOG451C6S PhylomeDB:Q9VNE9 ChiTaRS:RPL13A
            GenomeRNAi:40687 NextBio:820056 GermOnline:CG1475 Uniprot:Q9VNE9
        Length = 205

 Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
 Identities = 49/124 (39%), Positives = 68/124 (54%)

Query:    65 MTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRTVCLKPGRSYCSVGRISHEVG 124
             M PHK  RG  AL RL+V++GIP  Y +R+R+ VP A+R + L+  R YC VGR+SHEVG
Sbjct:    89 MIPHKTKRGQAALARLRVFDGIPSPYDKRRRVVVPIAMRVLTLRSDRKYCQVGRLSHEVG 148

Query:   125 WKYKTIVRHLXXXXXXXXXXXXXLHTVYLIPCLDCESNLTKKAGKQVKKATFPLTKQINT 184
             W Y+ +++ L              H   L         LT KA + + KA  P  K I +
Sbjct:   149 WHYQDVIKSLERKRKAKLRVTLK-HNREL-------KKLTVKARENIAKAAEPFNKIIKS 200

Query:   185 FGYK 188
             +GY+
Sbjct:   201 YGYE 204


>CGD|CAL0005216 [details] [associations]
            symbol:RPL16A species:5476 "Candida albicans" [GO:0032040
            "small-subunit processome" evidence=IDA] [GO:0016020 "membrane"
            evidence=IDA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005829
            "cytosol" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0030447 "filamentous growth" evidence=IMP] [GO:0009267
            "cellular response to starvation" evidence=IMP] [GO:0036170
            "filamentous growth of a population of unicellular organisms in
            response to starvation" evidence=IMP] [GO:0036180 "filamentous
            growth of a population of unicellular organisms in response to
            biotic stimulus" evidence=IMP] [GO:0071216 "cellular response to
            biotic stimulus" evidence=IMP] InterPro:IPR005755
            InterPro:IPR005822 InterPro:IPR023563 InterPro:IPR023564
            Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783 CGD:CAL0005216
            GO:GO:0071216 GO:GO:0036180 GO:GO:0016020 GO:GO:0006412
            GO:GO:0003735 GO:GO:0009267 EMBL:AACQ01000036 EMBL:AACQ01000035
            GO:GO:0036170 GO:GO:0032040 GO:GO:0015934 eggNOG:COG0102
            HOGENOM:HOG000225289 KO:K02872 Gene3D:3.90.1180.10
            PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
            TIGRFAMs:TIGR01077 RefSeq:XP_718943.1 RefSeq:XP_719047.1
            ProteinModelPortal:Q5AB87 SMR:Q5AB87 STRING:Q5AB87 GeneID:3639338
            GeneID:3639461 KEGG:cal:CaO19.13504 KEGG:cal:CaO19.6085
            Uniprot:Q5AB87
        Length = 200

 Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
 Identities = 39/70 (55%), Positives = 53/70 (75%)

Query:    65 MTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRTVCLKPGRSYCSVGRISHEVG 124
             M PHK  RG  AL+RLKV+EG+PP Y +++R+ VP ALR + LKPGR Y +VG++S  VG
Sbjct:    88 MIPHKTARGKAALERLKVFEGVPPPYDKKKRVVVPQALRVLRLKPGRKYTTVGKLSSAVG 147

Query:   125 WKYKTIVRHL 134
             WKY+++V  L
Sbjct:   148 WKYESVVEKL 157


>UNIPROTKB|Q5AB87 [details] [associations]
            symbol:RPL16A "Likely cytosolic ribosomal protein L16"
            species:237561 "Candida albicans SC5314" [GO:0009267 "cellular
            response to starvation" evidence=IMP] [GO:0016020 "membrane"
            evidence=IDA] [GO:0030447 "filamentous growth" evidence=IMP]
            [GO:0032040 "small-subunit processome" evidence=IDA] [GO:0036170
            "filamentous growth of a population of unicellular organisms in
            response to starvation" evidence=IMP] [GO:0036180 "filamentous
            growth of a population of unicellular organisms in response to
            biotic stimulus" evidence=IMP] [GO:0071216 "cellular response to
            biotic stimulus" evidence=IMP] InterPro:IPR005755
            InterPro:IPR005822 InterPro:IPR023563 InterPro:IPR023564
            Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783 CGD:CAL0005216
            GO:GO:0071216 GO:GO:0036180 GO:GO:0016020 GO:GO:0006412
            GO:GO:0003735 GO:GO:0009267 EMBL:AACQ01000036 EMBL:AACQ01000035
            GO:GO:0036170 GO:GO:0032040 GO:GO:0015934 eggNOG:COG0102
            HOGENOM:HOG000225289 KO:K02872 Gene3D:3.90.1180.10
            PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
            TIGRFAMs:TIGR01077 RefSeq:XP_718943.1 RefSeq:XP_719047.1
            ProteinModelPortal:Q5AB87 SMR:Q5AB87 STRING:Q5AB87 GeneID:3639338
            GeneID:3639461 KEGG:cal:CaO19.13504 KEGG:cal:CaO19.6085
            Uniprot:Q5AB87
        Length = 200

 Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
 Identities = 39/70 (55%), Positives = 53/70 (75%)

Query:    65 MTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRTVCLKPGRSYCSVGRISHEVG 124
             M PHK  RG  AL+RLKV+EG+PP Y +++R+ VP ALR + LKPGR Y +VG++S  VG
Sbjct:    88 MIPHKTARGKAALERLKVFEGVPPPYDKKKRVVVPQALRVLRLKPGRKYTTVGKLSSAVG 147

Query:   125 WKYKTIVRHL 134
             WKY+++V  L
Sbjct:   148 WKYESVVEKL 157


>POMBASE|SPBC2G2.05 [details] [associations]
            symbol:rpl1603 "60S ribosomal protein L13/L16
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002181
            "cytoplasmic translation" evidence=NAS] [GO:0003735 "structural
            constituent of ribosome" evidence=ISO] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006412
            "translation" evidence=ISO] [GO:0022625 "cytosolic large ribosomal
            subunit" evidence=ISO] InterPro:IPR005755 InterPro:IPR005822
            InterPro:IPR023563 InterPro:IPR023564 Pfam:PF00572
            PIRSF:PIRSF002181 PROSITE:PS00783 PomBase:SPBC2G2.05 GO:GO:0005730
            EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003735 GO:GO:0002181
            eggNOG:COG0102 GO:GO:0022625 HOGENOM:HOG000225289 KO:K02872
            Gene3D:3.90.1180.10 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
            SUPFAM:SSF52161 TIGRFAMs:TIGR01077 OrthoDB:EOG4C2MKV PIR:T40144
            RefSeq:NP_596434.1 ProteinModelPortal:O43004 SMR:O43004
            STRING:O43004 EnsemblFungi:SPBC2G2.05.1 GeneID:2540373
            KEGG:spo:SPBC2G2.05 OMA:GPKIPRR NextBio:20801501 Uniprot:O43004
        Length = 197

 Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
 Identities = 41/70 (58%), Positives = 50/70 (71%)

Query:    65 MTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRTVCLKPGRSYCSVGRISHEVG 124
             M PHK  RG  ALK L+  EGIPP + +++RL VP ALR + LKP R YC++GR+S EVG
Sbjct:    88 MLPHKTTRGNIALKNLQALEGIPPPFDKQKRLVVPAALRVLRLKPSRKYCTIGRLSSEVG 147

Query:   125 WKYKTIVRHL 134
             WKYK IV  L
Sbjct:   148 WKYKNIVSKL 157


>UNIPROTKB|Q3SZ90 [details] [associations]
            symbol:RPL13A "60S ribosomal protein L13a" species:9913
            "Bos taurus" [GO:1901194 "negative regulation of formation of
            translation preinitiation complex" evidence=ISS] [GO:0017148
            "negative regulation of translation" evidence=ISS] [GO:0015934
            "large ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
            evidence=IEA] [GO:0003735 "structural constituent of ribosome"
            evidence=IEA] InterPro:IPR005755 InterPro:IPR005822
            InterPro:IPR023563 InterPro:IPR023564 Pfam:PF00572 PROSITE:PS00783
            GO:GO:0017148 GO:GO:0006412 GO:GO:0003735 GO:GO:0015934
            eggNOG:COG0102 HOGENOM:HOG000225289 KO:K02872 Gene3D:3.90.1180.10
            PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
            TIGRFAMs:TIGR01077 OMA:FYRNKIK HOVERGEN:HBG062176 EMBL:BC103039
            IPI:IPI00712384 RefSeq:NP_001070466.1 UniGene:Bt.49211
            ProteinModelPortal:Q3SZ90 SMR:Q3SZ90 STRING:Q3SZ90 PRIDE:Q3SZ90
            Ensembl:ENSBTAT00000005007 GeneID:767925 KEGG:bta:767925 CTD:23521
            GeneTree:ENSGT00390000010799 InParanoid:Q3SZ90 OrthoDB:EOG479F83
            NextBio:20918282 GO:GO:1901194 Uniprot:Q3SZ90
        Length = 203

 Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
 Identities = 43/105 (40%), Positives = 59/105 (56%)

Query:    65 MTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRTVCLKPGRSYCSVGRISHEVG 124
             M PHK  RG  AL+RLKV++GIPP Y +++R+ VP AL+ V LKP R +  +GR++HEVG
Sbjct:    87 MLPHKTKRGQAALERLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVG 146

Query:   125 WKYKTIVRHLXXXXXXXXXXXXXLHTVYLIPCLDCESNLTKKAGK 169
             WKY+ +   L                  +      E N+ KK GK
Sbjct:   147 WKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNIEKKIGK 191


>POMBASE|SPAC23A1.11 [details] [associations]
            symbol:rpl1602 "60S ribosomal protein L13/L16
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002181
            "cytoplasmic translation" evidence=NAS] [GO:0003735 "structural
            constituent of ribosome" evidence=ISO] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006412
            "translation" evidence=ISO] [GO:0022625 "cytosolic large ribosomal
            subunit" evidence=ISO] InterPro:IPR005755 InterPro:IPR005822
            InterPro:IPR023563 InterPro:IPR023564 Pfam:PF00572
            PIRSF:PIRSF002181 PROSITE:PS00783 PomBase:SPAC23A1.11 EMBL:CU329670
            GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003735 GO:GO:0002181
            GO:GO:0022625 HOGENOM:HOG000225289 KO:K02872 Gene3D:3.90.1180.10
            PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
            TIGRFAMs:TIGR01077 OMA:FYRNKIK PIR:T38231 RefSeq:NP_594441.1
            ProteinModelPortal:O42848 SMR:O42848 STRING:O42848 PRIDE:O42848
            EnsemblFungi:SPAC23A1.11.1 GeneID:2542006 KEGG:spo:SPAC23A1.11
            OrthoDB:EOG4C2MKV NextBio:20803086 Uniprot:O42848
        Length = 197

 Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
 Identities = 40/70 (57%), Positives = 50/70 (71%)

Query:    65 MTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRTVCLKPGRSYCSVGRISHEVG 124
             M PHK  RG  AL+ L+  EGIPP + +++R+ VP ALR + LKPGR YC+VGR+S EVG
Sbjct:    88 MLPHKTARGQAALEHLQAVEGIPPPFDKQKRVVVPAALRVLRLKPGRKYCTVGRLSSEVG 147

Query:   125 WKYKTIVRHL 134
             WKY  IV  L
Sbjct:   148 WKYSDIVSKL 157


>POMBASE|SPBC839.13c [details] [associations]
            symbol:rpl1601 "60S ribosomal protein L13/L16
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002181
            "cytoplasmic translation" evidence=NAS] [GO:0003735 "structural
            constituent of ribosome" evidence=ISO] [GO:0005829 "cytosol"
            evidence=IDA] [GO:0006412 "translation" evidence=ISO] [GO:0022625
            "cytosolic large ribosomal subunit" evidence=ISO]
            InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023563
            InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
            PomBase:SPBC839.13c EMBL:CU329671 GenomeReviews:CU329671_GR
            GO:GO:0003735 GO:GO:0002181 eggNOG:COG0102 GO:GO:0022625
            HOGENOM:HOG000225289 KO:K02872 Gene3D:3.90.1180.10
            PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
            TIGRFAMs:TIGR01077 OMA:HYDTIKQ OrthoDB:EOG4C2MKV EMBL:AB016008
            PIR:T40720 PIR:T43381 RefSeq:NP_595253.1 ProteinModelPortal:O42991
            SMR:O42991 STRING:O42991 EnsemblFungi:SPBC839.13c.1 GeneID:2541175
            KEGG:spo:SPBC839.13c NextBio:20802287 Uniprot:O42991
        Length = 197

 Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
 Identities = 40/70 (57%), Positives = 50/70 (71%)

Query:    65 MTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRTVCLKPGRSYCSVGRISHEVG 124
             M PHK  RG  AL+ L+  EGIPP + +++R+ VP ALR + LKPGR YC+VGR+S EVG
Sbjct:    88 MLPHKTARGQAALEHLQAVEGIPPPFDKQKRVVVPAALRVLRLKPGRKYCTVGRLSSEVG 147

Query:   125 WKYKTIVRHL 134
             WKY  IV  L
Sbjct:   148 WKYNDIVAKL 157


>ZFIN|ZDB-GENE-030131-168 [details] [associations]
            symbol:rpl13a "ribosomal protein L13a" species:7955
            "Danio rerio" [GO:0003735 "structural constituent of ribosome"
            evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
            "translation" evidence=IEA] [GO:0015934 "large ribosomal subunit"
            evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
            InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023563
            InterPro:IPR023564 Pfam:PF00572 PROSITE:PS00783
            ZFIN:ZDB-GENE-030131-168 GO:GO:0006412 GO:GO:0003735 GO:GO:0015934
            KO:K02872 Gene3D:3.90.1180.10 PANTHER:PTHR11545
            PANTHER:PTHR11545:SF3 SUPFAM:SSF52161 TIGRFAMs:TIGR01077
            HOVERGEN:HBG062176 HSSP:O59300 CTD:23521 EMBL:BC047855
            IPI:IPI00632292 RefSeq:NP_997949.1 UniGene:Dr.32450
            ProteinModelPortal:Q7ZUR9 SMR:Q7ZUR9 STRING:Q7ZUR9 PRIDE:Q7ZUR9
            GeneID:560828 KEGG:dre:560828 InParanoid:Q7ZUR9 NextBio:20883635
            ArrayExpress:Q7ZUR9 Bgee:Q7ZUR9 Uniprot:Q7ZUR9
        Length = 205

 Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
 Identities = 49/122 (40%), Positives = 64/122 (52%)

Query:    65 MTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRTVCLKPGRSYCSVGRISHEVG 124
             M PHK  RG  AL RLKV++GIPP Y +R+R+ VP AL+ V LKP R +  +GR++HEVG
Sbjct:    89 MLPHKTKRGQAALDRLKVFDGIPPPYDKRKRMVVPAALKIVRLKPTRKFALLGRLAHEVG 148

Query:   125 WKYKTIVRHLXXXXXXXXXXXXXLHTVYLIPCLDCESNLTKKAGKQVKKATFPLTKQINT 184
             WKY+ I   L                V        E  LTK+A K V+      T  +  
Sbjct:   149 WKYQAITATLEEKRKEKAKLRYSKKKV--------EMKLTKQAEKNVESKIAVYTDVLKK 200

Query:   185 FG 186
             +G
Sbjct:   201 YG 202


>UNIPROTKB|F1PI16 [details] [associations]
            symbol:RPL13A "60S ribosomal protein L13a" species:9615
            "Canis lupus familiaris" [GO:0015934 "large ribosomal subunit"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
            "structural constituent of ribosome" evidence=IEA]
            InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023563
            InterPro:IPR023564 Pfam:PF00572 PROSITE:PS00783 GO:GO:0006412
            GO:GO:0003735 GO:GO:0022625 KO:K02872 Gene3D:3.90.1180.10
            PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
            TIGRFAMs:TIGR01077 OMA:FYRNKIK CTD:23521
            GeneTree:ENSGT00390000010799 UniGene:Cfa.40191 EMBL:AAEX03000800
            RefSeq:XP_003432774.1 Ensembl:ENSCAFT00000005848 GeneID:403680
            KEGG:cfa:403680 NextBio:20817184 Uniprot:F1PI16
        Length = 203

 Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
 Identities = 37/70 (52%), Positives = 50/70 (71%)

Query:    65 MTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRTVCLKPGRSYCSVGRISHEVG 124
             M PHK  RG  AL RLKV++GIPP Y +++R+ VP AL+ V LKP R +  +GR++HEVG
Sbjct:    87 MLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVG 146

Query:   125 WKYKTIVRHL 134
             WKY+ +   L
Sbjct:   147 WKYQAVTATL 156


>UNIPROTKB|Q9XSU0 [details] [associations]
            symbol:RPL13A "60S ribosomal protein L13a" species:9615
            "Canis lupus familiaris" [GO:1901194 "negative regulation of
            formation of translation preinitiation complex" evidence=ISS]
            [GO:0017148 "negative regulation of translation" evidence=ISS]
            [GO:0015934 "large ribosomal subunit" evidence=IEA] [GO:0006412
            "translation" evidence=IEA] [GO:0003735 "structural constituent of
            ribosome" evidence=IEA] InterPro:IPR005755 InterPro:IPR005822
            InterPro:IPR023563 InterPro:IPR023564 Pfam:PF00572 PROSITE:PS00783
            GO:GO:0017148 GO:GO:0006412 GO:GO:0003735 GO:GO:0015934
            eggNOG:COG0102 HOGENOM:HOG000225289 Gene3D:3.90.1180.10
            PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
            TIGRFAMs:TIGR01077 HOVERGEN:HBG062176 PDB:2ZKR PDBsum:2ZKR
            GO:GO:1901194 EMBL:DN325227 EMBL:AJ388525 EMBL:CO660712
            UniGene:Cfa.40191 STRING:Q9XSU0 PRIDE:Q9XSU0
            EvolutionaryTrace:Q9XSU0 Uniprot:Q9XSU0
        Length = 203

 Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
 Identities = 37/70 (52%), Positives = 50/70 (71%)

Query:    65 MTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRTVCLKPGRSYCSVGRISHEVG 124
             M PHK  RG  AL RLKV++GIPP Y +++R+ VP AL+ V LKP R +  +GR++HEVG
Sbjct:    87 MLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVG 146

Query:   125 WKYKTIVRHL 134
             WKY+ +   L
Sbjct:   147 WKYQAVTATL 156


>UNIPROTKB|P40429 [details] [associations]
            symbol:RPL13A "60S ribosomal protein L13a" species:9606
            "Homo sapiens" [GO:0006412 "translation" evidence=NAS;TAS]
            [GO:0003735 "structural constituent of ribosome" evidence=NAS]
            [GO:0022625 "cytosolic large ribosomal subunit" evidence=IDA]
            [GO:0017148 "negative regulation of translation" evidence=IMP;IDA]
            [GO:1901194 "negative regulation of formation of translation
            preinitiation complex" evidence=IDA] [GO:0030529 "ribonucleoprotein
            complex" evidence=IDA] [GO:0071346 "cellular response to
            interferon-gamma" evidence=IDA] [GO:0015934 "large ribosomal
            subunit" evidence=TAS] [GO:0000184 "nuclear-transcribed mRNA
            catabolic process, nonsense-mediated decay" evidence=TAS]
            [GO:0005829 "cytosol" evidence=TAS] [GO:0006413 "translational
            initiation" evidence=TAS] [GO:0006414 "translational elongation"
            evidence=TAS] [GO:0006415 "translational termination" evidence=TAS]
            [GO:0006614 "SRP-dependent cotranslational protein targeting to
            membrane" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
            [GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
            metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
            process" evidence=TAS] [GO:0019058 "viral infectious cycle"
            evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
            [GO:0044267 "cellular protein metabolic process" evidence=TAS]
            Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
            InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023563
            InterPro:IPR023564 Pfam:PF00572 PROSITE:PS00783
            Reactome:REACT_116125 GO:GO:0000184 GO:GO:0017148 GO:GO:0006413
            GO:GO:0003735 EMBL:CH471177 GO:GO:0071346 GO:GO:0006415
            GO:GO:0006414 Reactome:REACT_1762 eggNOG:COG0102 GO:GO:0006614
            GO:GO:0022625 GO:GO:0019083 HOGENOM:HOG000225289 KO:K02872
            Gene3D:3.90.1180.10 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
            SUPFAM:SSF52161 TIGRFAMs:TIGR01077 OMA:FYRNKIK HOVERGEN:HBG062176
            CTD:23521 OrthoDB:EOG479F83 GO:GO:1901194 ChiTaRS:RPL13A
            EMBL:X56932 EMBL:AB028893 EMBL:AK291120 EMBL:BC000514 EMBL:BC001675
            EMBL:BC001836 EMBL:BC062537 EMBL:BC065236 EMBL:BC070223
            EMBL:BC071929 IPI:IPI00304612 PIR:S29539 RefSeq:NP_001257420.1
            RefSeq:NP_036555.1 UniGene:Hs.523185 ProteinModelPortal:P40429
            SMR:P40429 IntAct:P40429 MINT:MINT-1417412 STRING:P40429
            PhosphoSite:P40429 DMDM:730451 PaxDb:P40429 PRIDE:P40429
            DNASU:23521 Ensembl:ENST00000391857 GeneID:23521 KEGG:hsa:23521
            UCSC:uc002pny.3 GeneCards:GC19P049991 H-InvDB:HIX0027968
            H-InvDB:HIX0158081 HGNC:HGNC:10304 HPA:HPA038751 neXtProt:NX_P40429
            PharmGKB:PA38122 InParanoid:P40429 PhylomeDB:P40429
            GenomeRNAi:23521 NextBio:45973 ArrayExpress:P40429 Bgee:P40429
            CleanEx:HS_RPL13A Genevestigator:P40429 GermOnline:ENSG00000142541
            Uniprot:P40429
        Length = 203

 Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
 Identities = 37/70 (52%), Positives = 50/70 (71%)

Query:    65 MTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRTVCLKPGRSYCSVGRISHEVG 124
             M PHK  RG  AL RLKV++GIPP Y +++R+ VP AL+ V LKP R +  +GR++HEVG
Sbjct:    87 MLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVG 146

Query:   125 WKYKTIVRHL 134
             WKY+ +   L
Sbjct:   147 WKYQAVTATL 156


>UNIPROTKB|F1RI01 [details] [associations]
            symbol:RPL13A "60S ribosomal protein L13a" species:9823
            "Sus scrofa" [GO:0015934 "large ribosomal subunit" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
            constituent of ribosome" evidence=IEA] InterPro:IPR005755
            InterPro:IPR005822 InterPro:IPR023563 InterPro:IPR023564
            Pfam:PF00572 PROSITE:PS00783 GO:GO:0006412 GO:GO:0003735
            GO:GO:0015934 KO:K02872 Gene3D:3.90.1180.10 PANTHER:PTHR11545
            PANTHER:PTHR11545:SF3 SUPFAM:SSF52161 TIGRFAMs:TIGR01077
            OMA:FYRNKIK CTD:23521 GeneTree:ENSGT00390000010799 EMBL:FP102665
            RefSeq:NP_001230997.1 UniGene:Ssc.17024 UniGene:Ssc.27927
            Ensembl:ENSSSCT00000003516 GeneID:780432 KEGG:ssc:780432
            ArrayExpress:F1RI01 Uniprot:F1RI01
        Length = 204

 Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
 Identities = 37/70 (52%), Positives = 50/70 (71%)

Query:    65 MTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRTVCLKPGRSYCSVGRISHEVG 124
             M PHK  RG  AL RLKV++GIPP Y +++R+ VP AL+ V LKP R +  +GR++HEVG
Sbjct:    88 MLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVG 147

Query:   125 WKYKTIVRHL 134
             WKY+ +   L
Sbjct:   148 WKYQAVTATL 157


>UNIPROTKB|Q4R8Z2 [details] [associations]
            symbol:RPL13A "60S ribosomal protein L13a" species:9541
            "Macaca fascicularis" [GO:0017148 "negative regulation of
            translation" evidence=ISS] [GO:1901194 "negative regulation of
            formation of translation preinitiation complex" evidence=ISS]
            InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023563
            InterPro:IPR023564 Pfam:PF00572 PROSITE:PS00783 GO:GO:0017148
            GO:GO:0006412 GO:GO:0003735 GO:GO:0015934 Gene3D:3.90.1180.10
            PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
            TIGRFAMs:TIGR01077 HOVERGEN:HBG062176 GO:GO:1901194 EMBL:AB168305
            ProteinModelPortal:Q4R8Z2 SMR:Q4R8Z2 PRIDE:Q4R8Z2 Uniprot:Q4R8Z2
        Length = 203

 Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
 Identities = 37/70 (52%), Positives = 50/70 (71%)

Query:    65 MTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRTVCLKPGRSYCSVGRISHEVG 124
             M PHK  RG  AL RLKV++GIPP Y +++R+ VP AL+ V LKP R +  +GR++HEVG
Sbjct:    87 MLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVG 146

Query:   125 WKYKTIVRHL 134
             WKY+ +   L
Sbjct:   147 WKYQAVTTTL 156


>UNIPROTKB|Q5RA38 [details] [associations]
            symbol:RPL13A "60S ribosomal protein L13a" species:9601
            "Pongo abelii" [GO:0017148 "negative regulation of translation"
            evidence=ISS] [GO:1901194 "negative regulation of formation of
            translation preinitiation complex" evidence=ISS] InterPro:IPR005755
            InterPro:IPR005822 InterPro:IPR023563 InterPro:IPR023564
            Pfam:PF00572 PROSITE:PS00783 GO:GO:0017148 GO:GO:0006412
            GO:GO:0003735 GO:GO:0015934 Gene3D:3.90.1180.10 PANTHER:PTHR11545
            PANTHER:PTHR11545:SF3 SUPFAM:SSF52161 TIGRFAMs:TIGR01077
            HOVERGEN:HBG062176 CTD:23521 GO:GO:1901194 EMBL:CR859183
            RefSeq:NP_001125810.1 UniGene:Pab.7590 ProteinModelPortal:Q5RA38
            SMR:Q5RA38 GeneID:100172738 KEGG:pon:100172738 InParanoid:Q5RA38
            Uniprot:Q5RA38
        Length = 203

 Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
 Identities = 37/70 (52%), Positives = 50/70 (71%)

Query:    65 MTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRTVCLKPGRSYCSVGRISHEVG 124
             M PHK  RG  AL RLKV++GIPP Y +++R+ VP AL+ V LKP R +  +GR++HEVG
Sbjct:    87 MLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVG 146

Query:   125 WKYKTIVRHL 134
             WKY+ +   L
Sbjct:   147 WKYQAVTATL 156


>MGI|MGI:1351455 [details] [associations]
            symbol:Rpl13a "ribosomal protein L13A" species:10090 "Mus
            musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0003735
            "structural constituent of ribosome" evidence=IEA] [GO:0005840
            "ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
            [GO:0006417 "regulation of translation" evidence=IEA] [GO:0015934
            "large ribosomal subunit" evidence=IEA] [GO:0017148 "negative
            regulation of translation" evidence=ISO] [GO:0022625 "cytosolic
            large ribosomal subunit" evidence=ISO] [GO:0030529
            "ribonucleoprotein complex" evidence=ISO] [GO:0071346 "cellular
            response to interferon-gamma" evidence=ISO] [GO:1901194 "negative
            regulation of formation of translation preinitiation complex"
            evidence=ISO] InterPro:IPR005755 InterPro:IPR005822
            InterPro:IPR023563 InterPro:IPR023564 Pfam:PF00572 PROSITE:PS00783
            MGI:MGI:1351455 GO:GO:0017148 GO:GO:0006412 GO:GO:0003735
            GO:GO:0030529 GO:GO:0071346 GO:GO:0015934 eggNOG:COG0102
            HOGENOM:HOG000225289 KO:K02872 Gene3D:3.90.1180.10
            PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
            TIGRFAMs:TIGR01077 HOVERGEN:HBG062176 CTD:23521 EMBL:X51528
            EMBL:BC082289 IPI:IPI00223217 PIR:JL0149 RefSeq:NP_033464.2
            UniGene:Mm.180458 ProteinModelPortal:P19253 SMR:P19253
            IntAct:P19253 STRING:P19253 PhosphoSite:P19253 PaxDb:P19253
            PRIDE:P19253 Ensembl:ENSMUST00000150350 GeneID:22121 KEGG:mmu:22121
            InParanoid:P19253 NextBio:301981 Bgee:P19253 CleanEx:MM_RPL13A
            Genevestigator:P19253 GermOnline:ENSMUSG00000003426 Uniprot:P19253
        Length = 203

 Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 37/70 (52%), Positives = 50/70 (71%)

Query:    65 MTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRTVCLKPGRSYCSVGRISHEVG 124
             M PHK  RG  AL+RLKV +GIPP Y +++R+ VP AL+ V LKP R +  +GR++HEVG
Sbjct:    87 MLPHKTKRGQAALERLKVLDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVG 146

Query:   125 WKYKTIVRHL 134
             WKY+ +   L
Sbjct:   147 WKYQAVTATL 156


>RGD|628697 [details] [associations]
            symbol:Rpl13a "ribosomal protein L13A" species:10116 "Rattus
            norvegicus" [GO:0003735 "structural constituent of ribosome"
            evidence=IEA;NAS] [GO:0005840 "ribosome" evidence=NAS] [GO:0006412
            "translation" evidence=IEA] [GO:0015934 "large ribosomal subunit"
            evidence=IEA] [GO:0017148 "negative regulation of translation"
            evidence=ISO;ISS] [GO:0022625 "cytosolic large ribosomal subunit"
            evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=ISO]
            [GO:0071346 "cellular response to interferon-gamma" evidence=ISO]
            [GO:1901194 "negative regulation of formation of translation
            preinitiation complex" evidence=ISO;ISS] InterPro:IPR005755
            InterPro:IPR005822 InterPro:IPR023563 InterPro:IPR023564
            Pfam:PF00572 PROSITE:PS00783 RGD:628697 GO:GO:0017148 GO:GO:0006412
            GO:GO:0005840 GO:GO:0003735 eggNOG:COG0102 GO:GO:0022625
            HOGENOM:HOG000225289 Gene3D:3.90.1180.10 PANTHER:PTHR11545
            PANTHER:PTHR11545:SF3 SUPFAM:SSF52161 TIGRFAMs:TIGR01077
            HOVERGEN:HBG062176 OrthoDB:EOG479F83 GO:GO:1901194 EMBL:X68282
            IPI:IPI00655314 PIR:A53204 UniGene:Rn.92211
            ProteinModelPortal:P35427 SMR:P35427 IntAct:P35427 STRING:P35427
            PhosphoSite:P35427 PRIDE:P35427 UCSC:RGD:628697 InParanoid:P35427
            ArrayExpress:P35427 Genevestigator:P35427
            GermOnline:ENSRNOG00000020618 Uniprot:P35427
        Length = 203

 Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 37/70 (52%), Positives = 50/70 (71%)

Query:    65 MTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRTVCLKPGRSYCSVGRISHEVG 124
             M PHK  RG  AL+RLKV +GIPP Y +++R+ VP AL+ V LKP R +  +GR++HEVG
Sbjct:    87 MLPHKTKRGQAALERLKVLDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVG 146

Query:   125 WKYKTIVRHL 134
             WKY+ +   L
Sbjct:   147 WKYQAVTATL 156


>UNIPROTKB|Q5RK10 [details] [associations]
            symbol:Rpl13a "Neuroprotective protein 11" species:10116
            "Rattus norvegicus" [GO:0006412 "translation" evidence=IEA]
            [GO:0015934 "large ribosomal subunit" evidence=IEA]
            InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023563
            InterPro:IPR023564 Pfam:PF00572 PROSITE:PS00783 RGD:628697
            GO:GO:0006412 GO:GO:0003735 EMBL:CH473979 GO:GO:0022625 KO:K02872
            Gene3D:3.90.1180.10 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
            SUPFAM:SSF52161 TIGRFAMs:TIGR01077 HOVERGEN:HBG062176 CTD:23521
            GeneTree:ENSGT00390000010799 UniGene:Rn.92211 EMBL:BC086382
            EMBL:EU000472 IPI:IPI00780235 RefSeq:NP_775462.2 SMR:Q5RK10
            STRING:Q5RK10 Ensembl:ENSRNOT00000027976 GeneID:317646
            KEGG:rno:317646 InParanoid:Q5RK10 NextBio:672053
            Genevestigator:Q5RK10 Uniprot:Q5RK10
        Length = 203

 Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 37/70 (52%), Positives = 50/70 (71%)

Query:    65 MTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRTVCLKPGRSYCSVGRISHEVG 124
             M PHK  RG  AL+RLKV +GIPP Y +++R+ VP AL+ V LKP R +  +GR++HEVG
Sbjct:    87 MLPHKTKRGQAALERLKVLDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVG 146

Query:   125 WKYKTIVRHL 134
             WKY+ +   L
Sbjct:   147 WKYQAVTATL 156


>SGD|S000001395 [details] [associations]
            symbol:RPL16A "Ribosomal 60S subunit protein L16A"
            species:4932 "Saccharomyces cerevisiae" [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0030529
            "ribonucleoprotein complex" evidence=IEA] [GO:0015934 "large
            ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
            evidence=IEA] [GO:0003735 "structural constituent of ribosome"
            evidence=IEA;TAS] [GO:0022625 "cytosolic large ribosomal subunit"
            evidence=TAS] [GO:0002181 "cytoplasmic translation" evidence=TAS]
            [GO:0003723 "RNA binding" evidence=IDA] InterPro:IPR005755
            InterPro:IPR005822 InterPro:IPR023563 InterPro:IPR023564
            Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783 SGD:S000001395
            EMBL:BK006942 GO:GO:0003723 GO:GO:0003735 GO:GO:0002181 EMBL:Z38059
            PDB:4B6A PDBsum:4B6A GO:GO:0022625 HOGENOM:HOG000225289 KO:K02872
            Gene3D:3.90.1180.10 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
            SUPFAM:SSF52161 TIGRFAMs:TIGR01077 OMA:EFGPYFP PDB:1K5Y PDB:1S1I
            PDB:3IZS PDB:3O58 PDB:3O5H PDB:3U5E PDB:3U5I PDBsum:1K5Y
            PDBsum:1S1I PDBsum:3IZS PDBsum:3O58 PDBsum:3O5H PDBsum:3U5E
            PDBsum:3U5I GeneTree:ENSGT00390000010799 OrthoDB:EOG4C2MKV
            PIR:S48401 RefSeq:NP_012133.1 ProteinModelPortal:P26784 SMR:P26784
            IntAct:P26784 MINT:MINT-2981627 STRING:P26784 PeptideAtlas:P26784
            EnsemblFungi:YIL133C GeneID:854673 KEGG:sce:YIL133C
            EvolutionaryTrace:P26784 NextBio:977265 ArrayExpress:P26784
            Genevestigator:P26784 GermOnline:YIL133C Uniprot:P26784
        Length = 199

 Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 38/70 (54%), Positives = 51/70 (72%)

Query:    65 MTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRTVCLKPGRSYCSVGRISHEVG 124
             M  HK  RG  AL+RLKV+EGIPP Y +++R+ VP ALR + LKPGR Y ++G++S  VG
Sbjct:    87 MVSHKTARGKAALERLKVFEGIPPPYDKKKRVVVPQALRVLRLKPGRKYTTLGKLSTSVG 146

Query:   125 WKYKTIVRHL 134
             WKY+ +V  L
Sbjct:   147 WKYEDVVAKL 156


>SGD|S000005013 [details] [associations]
            symbol:RPL16B "Ribosomal 60S subunit protein L16B"
            species:4932 "Saccharomyces cerevisiae" [GO:0005840 "ribosome"
            evidence=IEA] [GO:0003735 "structural constituent of ribosome"
            evidence=IEA;TAS] [GO:0003723 "RNA binding" evidence=IDA]
            [GO:0002181 "cytoplasmic translation" evidence=TAS] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
            evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit"
            evidence=TAS] [GO:0015934 "large ribosomal subunit" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] InterPro:IPR005755
            InterPro:IPR005822 InterPro:IPR023563 InterPro:IPR023564
            Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783 SGD:S000005013
            EMBL:BK006947 GO:GO:0003723 GO:GO:0003735 GO:GO:0002181 EMBL:X86470
            eggNOG:COG0102 GO:GO:0022625 HOGENOM:HOG000225289 KO:K02872
            OMA:RSAEYYA Gene3D:3.90.1180.10 PANTHER:PTHR11545
            PANTHER:PTHR11545:SF3 SUPFAM:SSF52161 TIGRFAMs:TIGR01077
            GeneTree:ENSGT00390000010799 OrthoDB:EOG4C2MKV EMBL:Z71345
            PIR:S53911 RefSeq:NP_014330.1 ProteinModelPortal:P26785 SMR:P26785
            IntAct:P26785 STRING:P26785 PaxDb:P26785 PeptideAtlas:P26785
            EnsemblFungi:YNL069C GeneID:855655 KEGG:sce:YNL069C NextBio:979911
            Genevestigator:P26785 GermOnline:YNL069C Uniprot:P26785
        Length = 198

 Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 37/70 (52%), Positives = 51/70 (72%)

Query:    65 MTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRTVCLKPGRSYCSVGRISHEVG 124
             M  HK  RG  AL+RLK++EGIPP Y +++R+ VP ALR + LKPGR Y ++G++S  VG
Sbjct:    86 MVSHKTARGKAALERLKIFEGIPPPYDKKKRVVVPQALRVLRLKPGRKYTTLGKLSTSVG 145

Query:   125 WKYKTIVRHL 134
             WKY+ +V  L
Sbjct:   146 WKYEDVVAKL 155


>TAIR|locus:2119335 [details] [associations]
            symbol:AT4G13170 species:3702 "Arabidopsis thaliana"
            [GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840 "ribosome"
            evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
            [GO:0015934 "large ribosomal subunit" evidence=IEA] [GO:0016020
            "membrane" evidence=IDA] [GO:0022625 "cytosolic large ribosomal
            subunit" evidence=IDA] InterPro:IPR005755 InterPro:IPR005822
            InterPro:IPR023563 InterPro:IPR023564 Pfam:PF00572
            PIRSF:PIRSF002181 PROSITE:PS00783 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0016020 GO:GO:0006412 GO:GO:0003735
            EMBL:AL049751 EMBL:AL161535 eggNOG:COG0102 GO:GO:0022625
            HOGENOM:HOG000225289 KO:K02872 ProtClustDB:CLSN2684535
            Gene3D:3.90.1180.10 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
            SUPFAM:SSF52161 TIGRFAMs:TIGR01077 EMBL:AY052263 EMBL:AY060518
            IPI:IPI00537926 PIR:T07697 RefSeq:NP_193053.1 UniGene:At.3259
            ProteinModelPortal:Q9SVR0 SMR:Q9SVR0 STRING:Q9SVR0 PaxDb:Q9SVR0
            PRIDE:Q9SVR0 EnsemblPlants:AT4G13170.1 GeneID:826931
            KEGG:ath:AT4G13170 GeneFarm:217 TAIR:At4g13170 InParanoid:Q9SVR0
            OMA:FYRNKIK PhylomeDB:Q9SVR0 Genevestigator:Q9SVR0
            GermOnline:AT4G13170 Uniprot:Q9SVR0
        Length = 206

 Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
 Identities = 35/70 (50%), Positives = 48/70 (68%)

Query:    65 MTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRTVCLKPGRSYCSVGRISHEVG 124
             M PHK  RGA AL RLKV+EGIPP Y + +R+ +P AL+ + L+ G  YC +GR+S EVG
Sbjct:    92 MIPHKTKRGAAALARLKVFEGIPPPYDKIKRMVIPDALKVLRLQSGHKYCLLGRLSSEVG 151

Query:   125 WKYKTIVRHL 134
             W +   ++ L
Sbjct:   152 WNHYDTIKEL 161


>TAIR|locus:2087268 [details] [associations]
            symbol:AT3G24830 species:3702 "Arabidopsis thaliana"
            [GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840 "ribosome"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA;ISS]
            [GO:0015934 "large ribosomal subunit" evidence=IEA;ISS] [GO:0022626
            "cytosolic ribosome" evidence=IDA] [GO:0016020 "membrane"
            evidence=IDA] [GO:0022625 "cytosolic large ribosomal subunit"
            evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
            "plasmodesma" evidence=IDA] [GO:0009664 "plant-type cell wall
            organization" evidence=RCA] [GO:0042545 "cell wall modification"
            evidence=RCA] InterPro:IPR005755 InterPro:IPR005822
            InterPro:IPR023563 InterPro:IPR023564 Pfam:PF00572
            PIRSF:PIRSF002181 PROSITE:PS00783 GO:GO:0009506 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0016020 GO:GO:0006412 GO:GO:0003735
            EMBL:AB028609 eggNOG:COG0102 GO:GO:0022625 EMBL:AY080870
            EMBL:AY150392 IPI:IPI00547010 RefSeq:NP_189127.1 UniGene:At.23983
            UniGene:At.2870 UniGene:At.43372 ProteinModelPortal:Q9LRX8
            SMR:Q9LRX8 IntAct:Q9LRX8 STRING:Q9LRX8 PaxDb:Q9LRX8 PRIDE:Q9LRX8
            EnsemblPlants:AT3G24830.1 GeneID:822081 KEGG:ath:AT3G24830
            GeneFarm:158 TAIR:At3g24830 HOGENOM:HOG000225289 InParanoid:Q9LRX8
            KO:K02872 OMA:RSAEYYA PhylomeDB:Q9LRX8 ProtClustDB:CLSN2684535
            Genevestigator:Q9LRX8 GermOnline:AT3G24830 Gene3D:3.90.1180.10
            PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
            TIGRFAMs:TIGR01077 Uniprot:Q9LRX8
        Length = 206

 Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
 Identities = 34/70 (48%), Positives = 48/70 (68%)

Query:    65 MTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRTVCLKPGRSYCSVGRISHEVG 124
             M PHK  RGA AL RLKV+EG+PP Y + +R+ +P AL+ + L+ G  YC +GR+S EVG
Sbjct:    92 MIPHKTKRGAAALARLKVFEGVPPPYDKVKRMVIPDALKVLRLQAGHKYCLLGRLSSEVG 151

Query:   125 WKYKTIVRHL 134
             W +   ++ L
Sbjct:   152 WNHYDTIKEL 161


>TAIR|locus:2098530 [details] [associations]
            symbol:AT3G07110 species:3702 "Arabidopsis thaliana"
            [GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840 "ribosome"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA;ISS]
            [GO:0015934 "large ribosomal subunit" evidence=IEA;ISS] [GO:0009507
            "chloroplast" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            [GO:0022626 "cytosolic ribosome" evidence=IDA] [GO:0016020
            "membrane" evidence=IDA] [GO:0022625 "cytosolic large ribosomal
            subunit" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
            [GO:0001510 "RNA methylation" evidence=RCA] InterPro:IPR005755
            InterPro:IPR005822 InterPro:IPR023563 InterPro:IPR023564
            Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783 GO:GO:0009506
            GO:GO:0009507 EMBL:CP002686 GO:GO:0005730 GO:GO:0016020
            GO:GO:0006412 GO:GO:0003735 GO:GO:0022625 KO:K02872
            Gene3D:3.90.1180.10 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
            SUPFAM:SSF52161 TIGRFAMs:TIGR01077 UniGene:At.20766 OMA:HYDTIKQ
            IPI:IPI00656921 RefSeq:NP_001030654.1 ProteinModelPortal:F4JD96
            SMR:F4JD96 PRIDE:F4JD96 EnsemblPlants:AT3G07110.2 GeneID:819897
            KEGG:ath:AT3G07110 Uniprot:F4JD96
        Length = 207

 Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
 Identities = 37/71 (52%), Positives = 48/71 (67%)

Query:    65 MTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRTVCLKPGRSYCSVGRISHEVG 124
             M PHK  RGA AL RLKV+EG+P  Y + +R+ VP AL+ + L+ G  YC +GR+S EVG
Sbjct:    92 MIPHKTKRGANALARLKVFEGVPTPYDKIKRMVVPDALKVLRLQAGHKYCLLGRLSSEVG 151

Query:   125 WK-YKTIVRHL 134
             W  Y TI + L
Sbjct:   152 WNHYDTIKQEL 162


>TAIR|locus:2156569 [details] [associations]
            symbol:AT5G48760 species:3702 "Arabidopsis thaliana"
            [GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840 "ribosome"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA;ISS]
            [GO:0015934 "large ribosomal subunit" evidence=IEA;ISS] [GO:0022626
            "cytosolic ribosome" evidence=IDA] [GO:0022625 "cytosolic large
            ribosomal subunit" evidence=IDA] [GO:0001510 "RNA methylation"
            evidence=RCA] [GO:0009664 "plant-type cell wall organization"
            evidence=RCA] [GO:0042545 "cell wall modification" evidence=RCA]
            InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023563
            InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006412 GO:GO:0003735
            EMBL:AB012242 GO:GO:0022625 HOGENOM:HOG000225289 KO:K02872
            ProtClustDB:CLSN2684535 Gene3D:3.90.1180.10 PANTHER:PTHR11545
            PANTHER:PTHR11545:SF3 SUPFAM:SSF52161 TIGRFAMs:TIGR01077
            EMBL:AY090359 EMBL:AY122902 EMBL:AY088191 EMBL:Z26407
            IPI:IPI00531944 RefSeq:NP_001078737.1 RefSeq:NP_199687.1
            UniGene:At.20766 UniGene:At.25519 UniGene:At.72564
            ProteinModelPortal:Q9FKC0 SMR:Q9FKC0 STRING:Q9FKC0 PRIDE:Q9FKC0
            EnsemblPlants:AT5G48760.1 EnsemblPlants:AT5G48760.2 GeneID:834934
            KEGG:ath:AT5G48760 GeneFarm:214 TAIR:At5g48760 InParanoid:Q9FKC0
            OMA:EFGPYFP PhylomeDB:Q9FKC0 Genevestigator:Q9FKC0
            GermOnline:AT5G48760 Uniprot:Q9FKC0
        Length = 206

 Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
 Identities = 34/70 (48%), Positives = 47/70 (67%)

Query:    65 MTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRTVCLKPGRSYCSVGRISHEVG 124
             M PHK  RGA AL RLKVYEG+P  Y + +R+ +P AL+ + L+ G  YC +GR+S EVG
Sbjct:    92 MIPHKTKRGAAALARLKVYEGVPTPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVG 151

Query:   125 WKYKTIVRHL 134
             W +   ++ L
Sbjct:   152 WNHYDTIKEL 161


>WB|WBGene00004428 [details] [associations]
            symbol:rpl-16 species:6239 "Caenorhabditis elegans"
            [GO:0003735 "structural constituent of ribosome" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] [GO:0015934 "large
            ribosomal subunit" evidence=IEA] [GO:0005840 "ribosome"
            evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
            "nematode larval development" evidence=IMP] [GO:0009792 "embryo
            development ending in birth or egg hatching" evidence=IMP]
            InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023563
            InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
            GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0006412
            GO:GO:0003735 GO:GO:0015934 eggNOG:COG0102 EMBL:Z46381
            HOGENOM:HOG000225289 KO:K02872 Gene3D:3.90.1180.10
            PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
            TIGRFAMs:TIGR01077 OMA:FYRNKIK GeneTree:ENSGT00390000010799
            EMBL:U31528 PIR:T23654 RefSeq:NP_497721.1 UniGene:Cel.23339
            ProteinModelPortal:Q27389 SMR:Q27389 DIP:DIP-25636N
            MINT:MINT-1065156 STRING:Q27389 PaxDb:Q27389
            EnsemblMetazoa:M01F1.2.1 EnsemblMetazoa:M01F1.2.2 GeneID:175455
            KEGG:cel:CELE_M01F1.2 UCSC:M01F1.2.2 CTD:175455 WormBase:M01F1.2
            InParanoid:Q27389 NextBio:888232 Uniprot:Q27389
        Length = 202

 Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
 Identities = 35/70 (50%), Positives = 49/70 (70%)

Query:    65 MTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRTVCLKPGRSYCSVGRISHEVG 124
             M PHK +RG +ALK L+ YEG+P KY + + L  P+A R   L+P R +C VGR+SHEVG
Sbjct:    88 MLPHKTNRGNEALKNLRAYEGVPAKYQKTKSLHAPSASR-FRLQPRRKFCVVGRLSHEVG 146

Query:   125 WKYKTIVRHL 134
             W+++ +V  L
Sbjct:   147 WQFQDVVAKL 156


>UNIPROTKB|E2QS54 [details] [associations]
            symbol:E2QS54 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0015934 "large ribosomal subunit"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
            "structural constituent of ribosome" evidence=IEA]
            InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023564
            GO:GO:0006412 GO:GO:0003735 GO:GO:0015934 Gene3D:3.90.1180.10
            PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
            Ensembl:ENSCAFT00000032205 Uniprot:E2QS54
        Length = 99

 Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
 Identities = 35/70 (50%), Positives = 49/70 (70%)

Query:    65 MTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRTVCLKPGRSYCSVGRISHEVG 124
             M PHK  +G  AL RLKV++GIPP Y ++Q + VP AL+ V LKP R +  +GR++H+VG
Sbjct:     1 MLPHKT-KGQAALDRLKVFDGIPPPYNKKQ-MVVPAALKVVRLKPTRKFAYLGRLAHKVG 58

Query:   125 WKYKTIVRHL 134
             WKY+ +   L
Sbjct:    59 WKYQAVTATL 68


>DICTYBASE|DDB_G0275881 [details] [associations]
            symbol:rpl13a "S60 ribosomal protein L13a"
            species:44689 "Dictyostelium discoideum" [GO:0005615 "extracellular
            space" evidence=IDA] [GO:0015934 "large ribosomal subunit"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
            "ribosome" evidence=IEA] [GO:0003735 "structural constituent of
            ribosome" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
            evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
            InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023563
            InterPro:IPR023564 Pfam:PF00572 PIRSF:PIRSF002181 PROSITE:PS00783
            dictyBase:DDB_G0275881 GO:GO:0005615 GO:GO:0006412
            GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0003735
            GO:GO:0015934 eggNOG:COG0102 KO:K02872 Gene3D:3.90.1180.10
            PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
            TIGRFAMs:TIGR01077 HSSP:O59300 RefSeq:XP_643542.1
            ProteinModelPortal:Q553M7 SMR:Q553M7 STRING:Q553M7 PRIDE:Q553M7
            EnsemblProtists:DDB0231192 GeneID:8620124 KEGG:ddi:DDB_G0275881
            OMA:HYDTIKQ ProtClustDB:PTZ00068 Uniprot:Q553M7
        Length = 187

 Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
 Identities = 34/70 (48%), Positives = 45/70 (64%)

Query:    65 MTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRTVCLKPGRSYCSVGRISHEVG 124
             M PHK  RG  AL  +KV+EG+P  Y + +R+ VP+ALR V L   R Y  + R+S EVG
Sbjct:    87 MLPHKTPRGQAALDNMKVFEGVPAPYDKVKRVVVPSALRVVKLNTTRKYTVLSRLSQEVG 146

Query:   125 WKYKTIVRHL 134
             WKY+ +V  L
Sbjct:   147 WKYRAVVAKL 156


>UNIPROTKB|Q6NVV1 [details] [associations]
            symbol:Q6NVV1 "Putative 60S ribosomal protein L13a-like
            MGC87657" species:9606 "Homo sapiens" [GO:0003735 "structural
            constituent of ribosome" evidence=IEA] [GO:0006412 "translation"
            evidence=IEA] [GO:0015934 "large ribosomal subunit" evidence=IEA]
            InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023564
            PROSITE:PS00783 GO:GO:0006412 GO:GO:0003735 GO:GO:0015934
            eggNOG:COG0102 Gene3D:3.90.1180.10 PANTHER:PTHR11545
            PANTHER:PTHR11545:SF3 SUPFAM:SSF52161 EMBL:BC067891 IPI:IPI00432865
            UniGene:Hs.663461 ProteinModelPortal:Q6NVV1 SMR:Q6NVV1
            IntAct:Q6NVV1 STRING:Q6NVV1 PaxDb:Q6NVV1 PRIDE:Q6NVV1
            neXtProt:NX_Q6NVV1 HOVERGEN:HBG062176 InParanoid:Q6NVV1
            Genevestigator:Q6NVV1 Uniprot:Q6NVV1
        Length = 102

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 32/70 (45%), Positives = 45/70 (64%)

Query:    65 MTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRTVCLKPGRSYCSVGRISHEVG 124
             M  HK  RG  +L  LKV++GIPP Y +++R+ VP AL+ V LKP R +  +GR + EV 
Sbjct:     1 MLRHKTKRGHASLDCLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFALLGRQAQEVR 60

Query:   125 WKYKTIVRHL 134
             WKY+ +   L
Sbjct:    61 WKYQAVTATL 70


>UNIPROTKB|G3MXM1 [details] [associations]
            symbol:G3MXM1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0015934 "large ribosomal subunit" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
            constituent of ribosome" evidence=IEA] InterPro:IPR005755
            InterPro:IPR005822 InterPro:IPR023564 Pfam:PF00572 GO:GO:0006412
            GO:GO:0003735 GO:GO:0015934 Gene3D:3.90.1180.10 PANTHER:PTHR11545
            PANTHER:PTHR11545:SF3 SUPFAM:SSF52161 TIGRFAMs:TIGR01077
            GeneTree:ENSGT00390000010799 EMBL:DAAA02019350
            Ensembl:ENSBTAT00000064024 Uniprot:G3MXM1
        Length = 193

 Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 40/115 (34%), Positives = 61/115 (53%)

Query:    73 GAKALKRLKVYEGIPPKYARRQRLCVPTALRTVCLKPGRSYCSVGRISHEVGWKYKTIVR 132
             G  AL+ L+V++GIPP Y +R+R+ VP AL+ V LKP R +  +GR++HE+GW  + +  
Sbjct:    85 GQAALEHLEVFDGIPPTYNKRKRMVVPAALKVVRLKPTRKFAYLGRLAHEIGWTDQAVTA 144

Query:   133 HLXXXXXXXXXXXXXLHTVYLIPCLDCESNLTKKAGKQVKKATFPLTKQINTFGY 187
              L             +H  Y    L     L K A K ++K T   T+ + T G+
Sbjct:   145 TLDEKRKEKAQ----IH--YWKKQL--LMRLPKHAEKNIEKKTDKFTEVLKTHGF 191


>GENEDB_PFALCIPARUM|PF10_0043 [details] [associations]
            symbol:PF10_0043 "ribosomal protein L13,
            putative" species:5833 "Plasmodium falciparum" [GO:0022625
            "cytosolic large ribosomal subunit" evidence=ISS]
            InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023564
            Pfam:PF00572 PIRSF:PIRSF002181 GO:GO:0006412 GO:GO:0003735
            EMBL:AE014185 GO:GO:0022625 HOGENOM:HOG000225289 KO:K02872
            Gene3D:3.90.1180.10 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
            SUPFAM:SSF52161 TIGRFAMs:TIGR01077 HSSP:O59300 ProtClustDB:PTZ00068
            RefSeq:XP_001347328.1 ProteinModelPortal:Q8IJZ7 SMR:Q8IJZ7
            IntAct:Q8IJZ7 MINT:MINT-1665265 PRIDE:Q8IJZ7
            EnsemblProtists:PF10_0043:mRNA GeneID:810201 KEGG:pfa:PF10_0043
            EuPathDB:PlasmoDB:PF3D7_1004000 OMA:VAVRCED Uniprot:Q8IJZ7
        Length = 202

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 31/68 (45%), Positives = 44/68 (64%)

Query:    65 MTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRTVCLKPGRSYCSVGRISHEVG 124
             M PHK  +G  ALK+LKV  G+P  Y ++++  +P+ALR   LK  R YC +G +S  VG
Sbjct:    86 MLPHKTYKGQLALKKLKVCVGMPYPYDKKKKYVLPSALRAFRLKKHRRYCRLGTLSSRVG 145

Query:   125 WKYKTIVR 132
             W Y T+V+
Sbjct:   146 WNYDTLVK 153


>UNIPROTKB|Q8IJZ7 [details] [associations]
            symbol:PF10_0043 "60S ribosomal protein L13, putative"
            species:36329 "Plasmodium falciparum 3D7" [GO:0022625 "cytosolic
            large ribosomal subunit" evidence=ISS] InterPro:IPR005755
            InterPro:IPR005822 InterPro:IPR023564 Pfam:PF00572
            PIRSF:PIRSF002181 GO:GO:0006412 GO:GO:0003735 EMBL:AE014185
            GO:GO:0022625 HOGENOM:HOG000225289 KO:K02872 Gene3D:3.90.1180.10
            PANTHER:PTHR11545 PANTHER:PTHR11545:SF3 SUPFAM:SSF52161
            TIGRFAMs:TIGR01077 HSSP:O59300 ProtClustDB:PTZ00068
            RefSeq:XP_001347328.1 ProteinModelPortal:Q8IJZ7 SMR:Q8IJZ7
            IntAct:Q8IJZ7 MINT:MINT-1665265 PRIDE:Q8IJZ7
            EnsemblProtists:PF10_0043:mRNA GeneID:810201 KEGG:pfa:PF10_0043
            EuPathDB:PlasmoDB:PF3D7_1004000 OMA:VAVRCED Uniprot:Q8IJZ7
        Length = 202

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 31/68 (45%), Positives = 44/68 (64%)

Query:    65 MTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRTVCLKPGRSYCSVGRISHEVG 124
             M PHK  +G  ALK+LKV  G+P  Y ++++  +P+ALR   LK  R YC +G +S  VG
Sbjct:    86 MLPHKTYKGQLALKKLKVCVGMPYPYDKKKKYVLPSALRAFRLKKHRRYCRLGTLSSRVG 145

Query:   125 WKYKTIVR 132
             W Y T+V+
Sbjct:   146 WNYDTLVK 153


>UNIPROTKB|I3L8K3 [details] [associations]
            symbol:I3L8K3 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0022625 "cytosolic large ribosomal subunit"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
            "structural constituent of ribosome" evidence=IEA]
            InterPro:IPR005755 InterPro:IPR005822 InterPro:IPR023564
            Pfam:PF00572 GO:GO:0006412 GO:GO:0003735 GO:GO:0015934
            Gene3D:3.90.1180.10 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
            SUPFAM:SSF52161 TIGRFAMs:TIGR01077 GeneTree:ENSGT00390000010799
            Ensembl:ENSSSCT00000026257 OMA:RINTNGA Uniprot:I3L8K3
        Length = 195

 Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 28/63 (44%), Positives = 41/63 (65%)

Query:    68 HKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRTVCLKPGRSYCSVGRISHEVGWKY 127
             HK   G   L  LKV++ IPP Y +++R+ +P AL+ V LKP R +  +G +++EVGWKY
Sbjct:    82 HKTRGGQATLDHLKVFDEIPPPYDKKKRMMIPAALKVVRLKPMRKFAYLGCLAYEVGWKY 141

Query:   128 KTI 130
               I
Sbjct:   142 HAI 144


>UNIPROTKB|Q95307 [details] [associations]
            symbol:RPL13A "60S ribosomal protein L13a" species:9823
            "Sus scrofa" [GO:1901194 "negative regulation of formation of
            translation preinitiation complex" evidence=ISS] [GO:0017148
            "negative regulation of translation" evidence=ISS] [GO:0015934
            "large ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
            evidence=IEA] [GO:0003735 "structural constituent of ribosome"
            evidence=IEA] InterPro:IPR005755 InterPro:IPR005822
            InterPro:IPR023563 InterPro:IPR023564 Pfam:PF00572
            PIRSF:PIRSF002181 PROSITE:PS00783 GO:GO:0017148 GO:GO:0006412
            GO:GO:0003735 GO:GO:0015934 eggNOG:COG0102 HOGENOM:HOG000225289
            Gene3D:3.90.1180.10 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
            SUPFAM:SSF52161 TIGRFAMs:TIGR01077 HOVERGEN:HBG062176
            OrthoDB:EOG479F83 GO:GO:1901194 EMBL:Z81152 EMBL:Z84103
            STRING:Q95307 PRIDE:Q95307 Uniprot:Q95307
        Length = 137

 Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
 Identities = 27/55 (49%), Positives = 37/55 (67%)

Query:    65 MTPHKLDRGAKALKRLKVYEGIPPKYARRQRLCVPTALRTVCLKPGRSYCSVGRI 119
             M PHK  RG  AL RLKV++GIPP Y +++R+ VP AL+ V LK    +  +GR+
Sbjct:    83 MLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKLTGKFXYLGRL 137


>UNIPROTKB|F6UMX6 [details] [associations]
            symbol:F6UMX6 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0015934 "large ribosomal subunit"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
            "structural constituent of ribosome" evidence=IEA]
            InterPro:IPR005755 InterPro:IPR005822 GO:GO:0006412 GO:GO:0003735
            GO:GO:0015934 PANTHER:PTHR11545 PANTHER:PTHR11545:SF3
            GeneTree:ENSGT00390000010799 Ensembl:ENSCAFT00000032205
            EMBL:AAEX03013124 OMA:MAEGQXD Uniprot:F6UMX6
        Length = 86

 Score = 101 (40.6 bits), Expect = 1.7e-05, P = 1.7e-05
 Identities = 18/39 (46%), Positives = 26/39 (66%)

Query:    96 LCVPTALRTVCLKPGRSYCSVGRISHEVGWKYKTIVRHL 134
             + VP AL+ V LKP R +  +G ++HEVGWKY+ +   L
Sbjct:     1 MVVPAALKVVRLKPTRKFAYLGCLAHEVGWKYQAVTATL 39


>UNIPROTKB|I3LN23 [details] [associations]
            symbol:I3LN23 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0015934 "large ribosomal subunit" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
            constituent of ribosome" evidence=IEA] InterPro:IPR005755
            InterPro:IPR005822 InterPro:IPR023564 Pfam:PF00572 GO:GO:0006412
            GO:GO:0003735 GO:GO:0015934 Gene3D:3.90.1180.10 PANTHER:PTHR11545
            PANTHER:PTHR11545:SF3 SUPFAM:SSF52161 TIGRFAMs:TIGR01077
            GeneTree:ENSGT00390000010799 Ensembl:ENSSSCT00000030341
            Uniprot:I3LN23
        Length = 207

 Score = 109 (43.4 bits), Expect = 9.9e-05, P = 9.9e-05
 Identities = 33/114 (28%), Positives = 50/114 (43%)

Query:    77 LKRLKVYEGIPPKYARRQRLCVPTALRTVCLKP---GRSYCSVGRISHEVGWKYKTIVRH 133
             L+R      +PP  + ++R+ VP AL+ V   P      +  +GR++HEVGWKY+     
Sbjct:    97 LQRPPALASLPPCLSLKKRMVVPAALKVVRFAPPFPSPQFAYLGRLAHEVGWKYQA---E 153

Query:   134 LXXXXXXXXXXXXXLHTVYLIPCLDCESNLTKKAGKQVKKATFPLTKQINTFGY 187
                            H    I  L  E  L K+A K V+K     T+ + T G+
Sbjct:   154 EAAHGEGTGLEQEGRHVPSRIRQL--EKRLRKQAEKNVEKKIDRFTEVLKTHGF 205


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.133   0.389    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      188       175   0.00078  109 3  11 22  0.38    32
                                                     31  0.49    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  36
  No. of states in DFA:  580 (62 KB)
  Total size of DFA:  147 KB (2090 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.53u 0.09s 15.62t   Elapsed:  00:00:01
  Total cpu time:  15.53u 0.09s 15.62t   Elapsed:  00:00:01
  Start:  Thu Aug 15 14:02:24 2013   End:  Thu Aug 15 14:02:25 2013

Back to top