BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9438
(274 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2Q2L|A Chain A, Crystal Structure Of Superoxide Dismutase From P.
Atrosanguina
pdb|2Q2L|B Chain B, Crystal Structure Of Superoxide Dismutase From P.
Atrosanguina
Length = 152
Score = 144 bits (362), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 71/141 (50%), Positives = 90/141 (63%), Gaps = 5/141 (3%)
Query: 133 SGNVTFIQHDDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
+G + F Q DG TV G ++GLK HGFH+H GD GC S G H+NP K+
Sbjct: 15 AGTILFTQEGDGPTTVTGNISGLKPGL-----HGFHVHALGDTTNGCMSTGPHFNPAGKE 69
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG+P+ E RH GDLGNI G A F DK I LTGP+SI+GR ++VH+D DD G+G
Sbjct: 70 HGSPEDETRHAGDLGNITVGDDGTACFTIVDKQIPLTGPHSIIGRAVVVHADPDDLGKGG 129
Query: 253 FNDSTTTGHAGSRVACGVIGL 273
S +TG+AG R+ACG+IGL
Sbjct: 130 HELSKSTGNAGGRIACGIIGL 150
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Query: 65 SGNVTFIQHDDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNP 120
+G + F Q DG TV G ++GLK HGFH+H GD GC S G H+NP
Sbjct: 15 AGTILFTQEGDGPTTVTGNISGLKPGL-----HGFHVHALGDTTNGCMSTGPHFNP 65
>pdb|1SRD|A Chain A, Three-Dimensional Structure Of Cu,Zn-Superoxide Dismutase
From Spinach At 2.0 Angstroms Resolution
pdb|1SRD|B Chain B, Three-Dimensional Structure Of Cu,Zn-Superoxide Dismutase
From Spinach At 2.0 Angstroms Resolution
pdb|1SRD|C Chain C, Three-Dimensional Structure Of Cu,Zn-Superoxide Dismutase
From Spinach At 2.0 Angstroms Resolution
pdb|1SRD|D Chain D, Three-Dimensional Structure Of Cu,Zn-Superoxide Dismutase
From Spinach At 2.0 Angstroms Resolution
Length = 154
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/140 (52%), Positives = 90/140 (64%), Gaps = 5/140 (3%)
Query: 134 GNVTFIQHDDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQH 193
G VT Q DDG TV ++GL +HGFH+HE GD GC S G H+NP +K H
Sbjct: 17 GVVTLTQEDDGPTTVNVRISGLAPG-----KHGFHLHEFGDTTNGCMSTGPHFNPDKKTH 71
Query: 194 GAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGMF 253
GAP+ EVRH GDLGNI A+ GVA D I LTGP S++GR L+VH +DD G+G
Sbjct: 72 GAPEDEVRHAGDLGNIVANTDGVAEATIVDNQIPLTGPNSVVGRALVVHELEDDLGKGGH 131
Query: 254 NDSTTTGHAGSRVACGVIGL 273
S TTG+AG R+ACGV+GL
Sbjct: 132 ELSPTTGNAGGRLACGVVGL 151
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 40/75 (53%), Gaps = 11/75 (14%)
Query: 48 AVAVLRPYASSPSVTSPSGNVTFIQHDDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDL 107
AVAVL+ ++ G VT Q DDG TV ++GL +HGFH+HE GD
Sbjct: 5 AVAVLK------GTSNVEGVVTLTQEDDGPTTVNVRISGLAPG-----KHGFHLHEFGDT 53
Query: 108 REGCASLGGHYNPQQ 122
GC S G H+NP +
Sbjct: 54 TNGCMSTGPHFNPDK 68
>pdb|3KM1|A Chain A, Zinc-Reconstituted Tomato Chloroplast Superoxide Dismutase
pdb|3KM1|B Chain B, Zinc-Reconstituted Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|A Chain A, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|B Chain B, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|C Chain C, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|D Chain D, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|E Chain E, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|F Chain F, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|G Chain G, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|H Chain H, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|I Chain I, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|J Chain J, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|K Chain K, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|L Chain L, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|M Chain M, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|N Chain N, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|O Chain O, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|P Chain P, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|Q Chain Q, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|R Chain R, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|S Chain S, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|T Chain T, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|U Chain U, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|V Chain V, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|W Chain W, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|X Chain X, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3MKG|A Chain A, Low Ph As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3MKG|B Chain B, Low Ph As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3PU7|A Chain A, Cu-Zn Tomato Chloroplast Superoxide Dismutase
pdb|3PU7|B Chain B, Cu-Zn Tomato Chloroplast Superoxide Dismutase
pdb|3HOG|A Chain A, Metal-Free Tomato Chloroplast Superoxide Dismutase
pdb|3S0P|A Chain A, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|B Chain B, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|C Chain C, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|D Chain D, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|E Chain E, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|F Chain F, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|G Chain G, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|H Chain H, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
Length = 154
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/140 (52%), Positives = 87/140 (62%), Gaps = 5/140 (3%)
Query: 134 GNVTFIQHDDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQH 193
G VT Q DDG TV +TGL HGFH+HE GD GC S G H+NP + H
Sbjct: 17 GVVTLSQDDDGPTTVNVRITGLAPGL-----HGFHLHEYGDTTNGCMSTGAHFNPNKLTH 71
Query: 194 GAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGMF 253
GAP E+RH GDLGNI A+ GVA D I LTGP S++GR L+VH +DD G+G
Sbjct: 72 GAPGDEIRHAGDLGNIVANADGVAEVTLVDNQIPLTGPNSVVGRALVVHELEDDLGKGGH 131
Query: 254 NDSTTTGHAGSRVACGVIGL 273
S TTG+AG R+ACGV+GL
Sbjct: 132 ELSLTTGNAGGRLACGVVGL 151
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 39/75 (52%), Gaps = 11/75 (14%)
Query: 48 AVAVLRPYASSPSVTSPSGNVTFIQHDDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDL 107
AVAVL+ ++ V VT Q DDG TV +TGL HGFH+HE GD
Sbjct: 5 AVAVLKGNSNVEGV------VTLSQDDDGPTTVNVRITGLAPGL-----HGFHLHEYGDT 53
Query: 108 REGCASLGGHYNPQQ 122
GC S G H+NP +
Sbjct: 54 TNGCMSTGAHFNPNK 68
>pdb|3F7K|A Chain A, X-Ray Crystal Structure Of An Alvinella Pompejana Cu,Zn
Superoxide Dismutase- Hydrogen Peroxide Complex
pdb|3F7L|A Chain A, X-Ray Crystal Structure Of Alvinella Pompejana Cu,Zn
Superoxide Dismutase
Length = 152
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 93/143 (65%), Gaps = 5/143 (3%)
Query: 131 SPSGNVTFIQHDDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQ 190
SP ++ + VTV G +TGL T G +HGFH+HE GD GC S GGH+NP
Sbjct: 12 SPVTGTIHLKEEGDMVTVTGEITGL---TPG--KHGFHVHEFGDNTNGCTSAGGHFNPHG 66
Query: 191 KQHGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGR 250
K+HGAP+ E RH GDLGN+ A G A +DK++ LTGP S++GR L+VH D+DD GR
Sbjct: 67 KEHGAPEDENRHAGDLGNVVAGEDGKAVINMKDKLVKLTGPDSVIGRTLVVHVDEDDLGR 126
Query: 251 GMFNDSTTTGHAGSRVACGVIGL 273
G S TG+AG R+ACGVIG+
Sbjct: 127 GGHEQSKITGNAGGRLACGVIGI 149
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 40/76 (52%), Gaps = 12/76 (15%)
Query: 46 IVAVAVLRPYASSPSVTSPSGNVTFIQHDDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKG 105
I AV VL+ SP ++ + VTV G +TGL T G +HGFH+HE G
Sbjct: 2 IHAVCVLKG-------DSPVTGTIHLKEEGDMVTVTGEITGL---TPG--KHGFHVHEFG 49
Query: 106 DLREGCASLGGHYNPQ 121
D GC S GGH+NP
Sbjct: 50 DNTNGCTSAGGHFNPH 65
>pdb|3GTT|A Chain A, Mouse Sod1
pdb|3GTT|B Chain B, Mouse Sod1
pdb|3GTT|C Chain C, Mouse Sod1
pdb|3GTT|D Chain D, Mouse Sod1
pdb|3GTT|E Chain E, Mouse Sod1
pdb|3GTT|F Chain F, Mouse Sod1
Length = 153
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 95/142 (66%), Gaps = 6/142 (4%)
Query: 134 GNVTFIQHDDGT-VTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q G V + G +TGL + +HGFH+H+ GD +GC S G H+NP K+
Sbjct: 16 GTIHFEQKASGEPVVLSGQITGLTEG-----QHGFHVHQYGDNTQGCTSAGPHFNPHSKK 70
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDLGN+ A GVA+ ED++ISL+G +SI+GR ++VH +DD G+G
Sbjct: 71 HGGPADEERHVGDLGNVTAGKDGVANVSIEDRVISLSGEHSIIGRTMVVHEKQDDLGKGG 130
Query: 253 FNDSTTTGHAGSRVACGVIGLV 274
+ST TG+AGSR+ACGVIG+
Sbjct: 131 NEESTKTGNAGSRLACGVIGIA 152
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 6/56 (10%)
Query: 66 GNVTFIQHDDGT-VTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNP 120
G + F Q G V + G +TGL + +HGFH+H+ GD +GC S G H+NP
Sbjct: 16 GTIHFEQKASGEPVVLSGQITGLTEG-----QHGFHVHQYGDNTQGCTSAGPHFNP 66
>pdb|3L9E|A Chain A, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
THE SILKWORM Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
pdb|3L9E|B Chain B, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
THE SILKWORM Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
pdb|3L9E|C Chain C, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
THE SILKWORM Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
pdb|3L9E|D Chain D, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
THE SILKWORM Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
Length = 154
Score = 138 bits (347), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 77/143 (53%), Positives = 92/143 (64%), Gaps = 7/143 (4%)
Query: 133 SGNVTFIQHDDGT-VTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQK 191
SG V F Q D+ + V V G V GL K +HGFH+HE GD GC S G H+NP+++
Sbjct: 14 SGTVFFDQQDEKSPVVVSGEVQGLTKG-----KHGFHVHEFGDNTNGCTSAGAHFNPEKQ 68
Query: 192 QHGAPDHEVRHIGDLGNIEA-SPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGR 250
HG P VRH+GDLGNIEA SGV +D ISL GP SI+GR L+VH+D DD G
Sbjct: 69 DHGGPSSAVRHVGDLGNIEAIEDSGVTKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGL 128
Query: 251 GMFNDSTTTGHAGSRVACGVIGL 273
G S TTG+AG R+ACGVIGL
Sbjct: 129 GGHELSKTTGNAGGRIACGVIGL 151
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 40/76 (52%), Gaps = 14/76 (18%)
Query: 48 AVAVLRPYASSPSVTSPSGNVTFIQHDDGT-VTVKGFVTGLKKNTAGSQEHGFHIHEKGD 106
AV VLR S G V F Q D+ + V V G V GL K +HGFH+HE GD
Sbjct: 5 AVCVLRGDVS--------GTVFFDQQDEKSPVVVSGEVQGLTKG-----KHGFHVHEFGD 51
Query: 107 LREGCASLGGHYNPQQ 122
GC S G H+NP++
Sbjct: 52 NTNGCTSAGAHFNPEK 67
>pdb|1E9O|A Chain A, Crystal Structure Of Bovine Sod - 1 Of 3
Length = 152
Score = 137 bits (346), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/129 (52%), Positives = 89/129 (68%), Gaps = 5/129 (3%)
Query: 145 TVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQHGAPDHEVRHIG 204
TV V G +TGL + +HGFH+H+ GD +GC S G H+NP K+HG P E RH+G
Sbjct: 27 TVVVTGSITGLTEG-----DHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVG 81
Query: 205 DLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGMFNDSTTTGHAGS 264
DLGN+ A +GVA + D +ISL+G YSI+GR ++VH DD GRG +ST TG+AGS
Sbjct: 82 DLGNVTADSNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLGRGGNEESTKTGNAGS 141
Query: 265 RVACGVIGL 273
R+ACGVIG+
Sbjct: 142 RLACGVIGI 150
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 5/44 (11%)
Query: 77 TVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNP 120
TV V G +TGL + +HGFH+H+ GD +GC S G H+NP
Sbjct: 27 TVVVTGSITGLTEG-----DHGFHVHQFGDNTQGCTSAGPHFNP 65
>pdb|1E9P|A Chain A, Crystal Structure Of Bovine Cu, Zn Sod To 1.7 Angstrom (3
Of 3)
Length = 151
Score = 137 bits (346), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/129 (52%), Positives = 89/129 (68%), Gaps = 5/129 (3%)
Query: 145 TVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQHGAPDHEVRHIG 204
TV V G +TGL + +HGFH+H+ GD +GC S G H+NP K+HG P E RH+G
Sbjct: 26 TVVVTGSITGLTEG-----DHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPSDEERHVG 80
Query: 205 DLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGMFNDSTTTGHAGS 264
DLGN+ A +GVA + D +ISL+G YSI+GR ++VH DD GRG +ST TG+AGS
Sbjct: 81 DLGNVTADSNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLGRGGNEESTKTGNAGS 140
Query: 265 RVACGVIGL 273
R+ACGVIG+
Sbjct: 141 RLACGVIGI 149
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 5/44 (11%)
Query: 77 TVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNP 120
TV V G +TGL + +HGFH+H+ GD +GC S G H+NP
Sbjct: 26 TVVVTGSITGLTEG-----DHGFHVHQFGDNTQGCTSAGPHFNP 64
>pdb|3SOD|O Chain O, Changes In Crystallographic Structure And Thermostability
Of A Cu,Zn Superoxide Dismutase Mutant Resulting From
The Removal Of Buried Cysteine
pdb|3SOD|Y Chain Y, Changes In Crystallographic Structure And Thermostability
Of A Cu,Zn Superoxide Dismutase Mutant Resulting From
The Removal Of Buried Cysteine
pdb|3SOD|G Chain G, Changes In Crystallographic Structure And Thermostability
Of A Cu,Zn Superoxide Dismutase Mutant Resulting From
The Removal Of Buried Cysteine
pdb|3SOD|B Chain B, Changes In Crystallographic Structure And Thermostability
Of A Cu,Zn Superoxide Dismutase Mutant Resulting From
The Removal Of Buried Cysteine
Length = 152
Score = 137 bits (346), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/129 (52%), Positives = 89/129 (68%), Gaps = 5/129 (3%)
Query: 145 TVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQHGAPDHEVRHIG 204
TV V G +TGL + +HGFH+H+ GD +GC S G H+NP K+HG P E RH+G
Sbjct: 27 TVVVTGSITGLTEG-----DHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVG 81
Query: 205 DLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGMFNDSTTTGHAGS 264
DLGN+ A +GVA + D +ISL+G YSI+GR ++VH DD GRG +ST TG+AGS
Sbjct: 82 DLGNVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLGRGGNEESTKTGNAGS 141
Query: 265 RVACGVIGL 273
R+ACGVIG+
Sbjct: 142 RLACGVIGI 150
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 5/44 (11%)
Query: 77 TVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNP 120
TV V G +TGL + +HGFH+H+ GD +GC S G H+NP
Sbjct: 27 TVVVTGSITGLTEG-----DHGFHVHQFGDNTQGCTSAGPHFNP 65
>pdb|1E9Q|A Chain A, Crystal Structure Of Bovine Cu Zn Sod-(1 Of 3)
Length = 151
Score = 137 bits (346), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/129 (52%), Positives = 89/129 (68%), Gaps = 5/129 (3%)
Query: 145 TVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQHGAPDHEVRHIG 204
TV V G +TGL + +HGFH+H+ GD +GC S G H+NP K+HG P E RH+G
Sbjct: 26 TVVVTGSITGLTEG-----DHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVG 80
Query: 205 DLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGMFNDSTTTGHAGS 264
DLGN+ A +GVA + D +ISL+G YSI+GR ++VH DD GRG +ST TG+AGS
Sbjct: 81 DLGNVTADSNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLGRGGNEESTKTGNAGS 140
Query: 265 RVACGVIGL 273
R+ACGVIG+
Sbjct: 141 RLACGVIGI 149
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 5/44 (11%)
Query: 77 TVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNP 120
TV V G +TGL + +HGFH+H+ GD +GC S G H+NP
Sbjct: 26 TVVVTGSITGLTEG-----DHGFHVHQFGDNTQGCTSAGPHFNP 64
>pdb|1Q0E|A Chain A, Atomic Resolution (1.15 ) Crystal Structure Of Bovine
Copper, Zinc Superoxide Dismutase
pdb|1Q0E|B Chain B, Atomic Resolution (1.15 ) Crystal Structure Of Bovine
Copper, Zinc Superoxide Dismutase
pdb|2SOD|O Chain O, Determination And Analysis Of The 2 Angstrom Structure Of
Copper, Zinc Superoxide Dismutase
pdb|2SOD|Y Chain Y, Determination And Analysis Of The 2 Angstrom Structure Of
Copper, Zinc Superoxide Dismutase
pdb|2SOD|B Chain B, Determination And Analysis Of The 2 Angstrom Structure Of
Copper, Zinc Superoxide Dismutase
pdb|2SOD|G Chain G, Determination And Analysis Of The 2 Angstrom Structure Of
Copper, Zinc Superoxide Dismutase
Length = 152
Score = 137 bits (346), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 68/129 (52%), Positives = 89/129 (68%), Gaps = 5/129 (3%)
Query: 145 TVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQHGAPDHEVRHIG 204
TV V G +TGL + +HGFH+H+ GD +GC S G H+NP K+HG P E RH+G
Sbjct: 27 TVVVTGSITGLTEG-----DHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVG 81
Query: 205 DLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGMFNDSTTTGHAGS 264
DLGN+ A +GVA + D +ISL+G YSI+GR ++VH DD GRG +ST TG+AGS
Sbjct: 82 DLGNVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLGRGGNEESTKTGNAGS 141
Query: 265 RVACGVIGL 273
R+ACGVIG+
Sbjct: 142 RLACGVIGI 150
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 5/44 (11%)
Query: 77 TVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNP 120
TV V G +TGL + +HGFH+H+ GD +GC S G H+NP
Sbjct: 27 TVVVTGSITGLTEG-----DHGFHVHQFGDNTQGCTSAGPHFNP 65
>pdb|1COB|A Chain A, Crystal Structure Solution And Refinement Of The
Semisynthetic Cobalt Substituted Bovine Erythrocyte
Enzyme Superoxide Dismutase At 2.0 Angstroms Resolution
pdb|1COB|B Chain B, Crystal Structure Solution And Refinement Of The
Semisynthetic Cobalt Substituted Bovine Erythrocyte
Enzyme Superoxide Dismutase At 2.0 Angstroms Resolution
pdb|1SXA|A Chain A, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXA|B Chain B, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXB|A Chain A, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXB|B Chain B, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXC|A Chain A, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXC|B Chain B, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXN|A Chain A, Reduced Bovine Superoxide Dismutase At Ph 5.0
pdb|1SXN|B Chain B, Reduced Bovine Superoxide Dismutase At Ph 5.0
pdb|1SXS|A Chain A, Reduced Bovine Superoxide Dismutase At Ph 5.0 Complexed
With Thiocyanate
pdb|1SXS|B Chain B, Reduced Bovine Superoxide Dismutase At Ph 5.0 Complexed
With Thiocyanate
pdb|1SXZ|A Chain A, Reduced Bovine Superoxide Dismutase At Ph 5.0 Complexed
With Azide
pdb|1SXZ|B Chain B, Reduced Bovine Superoxide Dismutase At Ph 5.0 Complexed
With Azide
pdb|1CBJ|A Chain A, Crystal Structure Of Bovine Superoxide Dismutase Crystal.
pdb|1CBJ|B Chain B, Crystal Structure Of Bovine Superoxide Dismutase Crystal.
pdb|2AEO|A Chain A, Crystal Structure Of Cisplatinated Bovine Cu,Zn Superoxide
Dismutase
pdb|2AEO|B Chain B, Crystal Structure Of Cisplatinated Bovine Cu,Zn Superoxide
Dismutase
pdb|2Z7U|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7U|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7W|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7W|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7Y|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7Y|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7Z|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7Z|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2ZOW|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2ZOW|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|3HW7|A Chain A, High Pressure (0.57 Gpa) Crystal Structure Of Bovine
Copper, Zinc Superoxide Dismutase At 2.0 Angstroms
pdb|3HW7|B Chain B, High Pressure (0.57 Gpa) Crystal Structure Of Bovine
Copper, Zinc Superoxide Dismutase At 2.0 Angstroms
Length = 151
Score = 137 bits (346), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 68/129 (52%), Positives = 89/129 (68%), Gaps = 5/129 (3%)
Query: 145 TVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQHGAPDHEVRHIG 204
TV V G +TGL + +HGFH+H+ GD +GC S G H+NP K+HG P E RH+G
Sbjct: 26 TVVVTGSITGLTEG-----DHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVG 80
Query: 205 DLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGMFNDSTTTGHAGS 264
DLGN+ A +GVA + D +ISL+G YSI+GR ++VH DD GRG +ST TG+AGS
Sbjct: 81 DLGNVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLGRGGNEESTKTGNAGS 140
Query: 265 RVACGVIGL 273
R+ACGVIG+
Sbjct: 141 RLACGVIGI 149
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 5/44 (11%)
Query: 77 TVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNP 120
TV V G +TGL + +HGFH+H+ GD +GC S G H+NP
Sbjct: 26 TVVVTGSITGLTEG-----DHGFHVHQFGDNTQGCTSAGPHFNP 64
>pdb|1E9P|B Chain B, Crystal Structure Of Bovine Cu, Zn Sod To 1.7 Angstrom (3
Of 3)
Length = 151
Score = 137 bits (345), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 67/129 (51%), Positives = 90/129 (69%), Gaps = 5/129 (3%)
Query: 145 TVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQHGAPDHEVRHIG 204
TV V G +TGL + +HGFH+H+ GD +GC S G H+NP K+HG P + RH+G
Sbjct: 26 TVVVTGSITGLTEG-----DHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPSDDERHVG 80
Query: 205 DLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGMFNDSTTTGHAGS 264
DLGN+ A +GVA + D +ISL+G YSI+GR ++VH DD GRG +ST+TG+AGS
Sbjct: 81 DLGNVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLGRGGNEESTSTGNAGS 140
Query: 265 RVACGVIGL 273
R+ACGVIG+
Sbjct: 141 RLACGVIGI 149
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 5/44 (11%)
Query: 77 TVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNP 120
TV V G +TGL + +HGFH+H+ GD +GC S G H+NP
Sbjct: 26 TVVVTGSITGLTEG-----DHGFHVHQFGDNTQGCTSAGPHFNP 64
>pdb|3L9Y|A Chain A, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
The Silkworm Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
pdb|3L9Y|B Chain B, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
The Silkworm Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
Length = 154
Score = 137 bits (344), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 76/143 (53%), Positives = 92/143 (64%), Gaps = 7/143 (4%)
Query: 133 SGNVTFIQHDDGT-VTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQK 191
SG V F Q D+ + V V G V GL K +HGFH+HE GD GC S G H+NP+++
Sbjct: 14 SGTVFFDQQDEKSPVVVSGEVQGLTKG-----KHGFHVHEFGDNTNGCTSAGAHFNPEKQ 68
Query: 192 QHGAPDHEVRHIGDLGNIEA-SPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGR 250
HG P VRH+GDLGNIEA +GV +D ISL GP SI+GR L+VH+D DD G
Sbjct: 69 DHGGPSSAVRHVGDLGNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGL 128
Query: 251 GMFNDSTTTGHAGSRVACGVIGL 273
G S TTG+AG R+ACGVIGL
Sbjct: 129 GGNELSKTTGNAGGRIACGVIGL 151
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 40/76 (52%), Gaps = 14/76 (18%)
Query: 48 AVAVLRPYASSPSVTSPSGNVTFIQHDDGT-VTVKGFVTGLKKNTAGSQEHGFHIHEKGD 106
AV VLR SG V F Q D+ + V V G V GL K +HGFH+HE GD
Sbjct: 5 AVCVLR--------GDVSGTVFFDQQDEKSPVVVSGEVQGLTKG-----KHGFHVHEFGD 51
Query: 107 LREGCASLGGHYNPQQ 122
GC S G H+NP++
Sbjct: 52 NTNGCTSAGAHFNPEK 67
>pdb|1E9O|B Chain B, Crystal Structure Of Bovine Sod - 1 Of 3
Length = 152
Score = 137 bits (344), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 67/129 (51%), Positives = 90/129 (69%), Gaps = 5/129 (3%)
Query: 145 TVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQHGAPDHEVRHIG 204
TV V G +TGL + +HGFH+H+ GD +GC S G H+NP K+HG P + RH+G
Sbjct: 27 TVVVTGSITGLTEG-----DHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDDERHVG 81
Query: 205 DLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGMFNDSTTTGHAGS 264
DLGN+ A +GVA + D +ISL+G YSI+GR ++VH DD GRG +ST+TG+AGS
Sbjct: 82 DLGNVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLGRGGNEESTSTGNAGS 141
Query: 265 RVACGVIGL 273
R+ACGVIG+
Sbjct: 142 RLACGVIGI 150
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 5/44 (11%)
Query: 77 TVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNP 120
TV V G +TGL + +HGFH+H+ GD +GC S G H+NP
Sbjct: 27 TVVVTGSITGLTEG-----DHGFHVHQFGDNTQGCTSAGPHFNP 65
>pdb|1E9Q|B Chain B, Crystal Structure Of Bovine Cu Zn Sod-(1 Of 3)
Length = 151
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/129 (51%), Positives = 90/129 (69%), Gaps = 5/129 (3%)
Query: 145 TVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQHGAPDHEVRHIG 204
TV V G +TGL + +HGFH+H+ GD +GC S G H+NP K+HG P + RH+G
Sbjct: 26 TVVVTGSITGLTEG-----DHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDDERHVG 80
Query: 205 DLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGMFNDSTTTGHAGS 264
DLGN+ A +GVA + D +ISL+G YSI+GR ++VH DD GRG +ST+TG+AGS
Sbjct: 81 DLGNVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLGRGGNEESTSTGNAGS 140
Query: 265 RVACGVIGL 273
R+ACGVIG+
Sbjct: 141 RLACGVIGI 149
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 5/44 (11%)
Query: 77 TVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNP 120
TV V G +TGL + +HGFH+H+ GD +GC S G H+NP
Sbjct: 26 TVVVTGSITGLTEG-----DHGFHVHQFGDNTQGCTSAGPHFNP 64
>pdb|2E46|A Chain A, Crystal Structure Analysis Of The Clock Protein Ea4
Length = 157
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/159 (44%), Positives = 98/159 (61%), Gaps = 5/159 (3%)
Query: 116 GHYNPQQGNSSPSVTSPSGNVTFIQHDDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDL 175
G P + + S + GN+TF Q DG V V+G +TGL E+GFH+HEKGDL
Sbjct: 4 GFTTPSRAIAVLSTETIRGNITFTQVQDGKVHVQGGITGLPPG-----EYGFHVHEKGDL 58
Query: 176 REGCASLGGHYNPQQKQHGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSIL 235
GC S G H+NP+ K HG P+ RH+GDLGN+ + + + D ISL+GP+ I+
Sbjct: 59 SGGCLSTGSHFNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGII 118
Query: 236 GRGLIVHSDKDDFGRGMFNDSTTTGHAGSRVACGVIGLV 274
GR +++H DD+G+ DS TG+AG RVACGVIG++
Sbjct: 119 GRAVVLHEKADDYGKSDHPDSRKTGNAGGRVACGVIGIL 157
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 12/75 (16%)
Query: 48 AVAVLRPYASSPSVTSPSGNVTFIQHDDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDL 107
A+AVL S + GN+TF Q DG V V+G +TGL E+GFH+HEKGDL
Sbjct: 11 AIAVL-------STETIRGNITFTQVQDGKVHVQGGITGLPPG-----EYGFHVHEKGDL 58
Query: 108 REGCASLGGHYNPQQ 122
GC S G H+NP+
Sbjct: 59 SGGCLSTGSHFNPEH 73
>pdb|1TO4|A Chain A, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO4|B Chain B, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO4|C Chain C, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO4|D Chain D, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO5|A Chain A, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO5|B Chain B, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO5|C Chain C, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO5|D Chain D, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
Length = 156
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 93/142 (65%), Gaps = 6/142 (4%)
Query: 134 GNVTFIQH-DDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G V F Q D+G V V +GLK + +HGFH+HE GD GC S G H+NP +++
Sbjct: 18 GVVKFTQETDNGPVHVHAEFSGLK-----AGKHGFHVHEFGDTTNGCTSAGAHFNPTKQE 72
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HGAP+ +RH+GDLGN+ A G A + DK+ISL G +SI+GR +++H ++DD GRG
Sbjct: 73 HGAPEDSIRHVGDLGNVVAGADGNAVYNATDKLISLNGSHSIIGRSMVIHENEDDLGRGG 132
Query: 253 FNDSTTTGHAGSRVACGVIGLV 274
S TG+AG R+ACGV+GL
Sbjct: 133 HELSKVTGNAGGRLACGVVGLA 154
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 66 GNVTFIQH-DDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQ 122
G V F Q D+G V V +GLK + +HGFH+HE GD GC S G H+NP +
Sbjct: 18 GVVKFTQETDNGPVHVHAEFSGLK-----AGKHGFHVHEFGDTTNGCTSAGAHFNPTK 70
>pdb|3GTV|A Chain A, Human-Mouse Sod1 Chimera
pdb|3GTV|B Chain B, Human-Mouse Sod1 Chimera
pdb|3GTV|C Chain C, Human-Mouse Sod1 Chimera
pdb|3GTV|D Chain D, Human-Mouse Sod1 Chimera
pdb|3GTV|E Chain E, Human-Mouse Sod1 Chimera
pdb|3GTV|F Chain F, Human-Mouse Sod1 Chimera
pdb|3GTV|G Chain G, Human-Mouse Sod1 Chimera
pdb|3GTV|H Chain H, Human-Mouse Sod1 Chimera
pdb|3GTV|I Chain I, Human-Mouse Sod1 Chimera
pdb|3GTV|J Chain J, Human-Mouse Sod1 Chimera
pdb|3GTV|K Chain K, Human-Mouse Sod1 Chimera
pdb|3GTV|L Chain L, Human-Mouse Sod1 Chimera
Length = 153
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 94/142 (66%), Gaps = 6/142 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP ++
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNPLSRK 70
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDLGN+ A GVA+ ED++ISL+G +SI+GR ++VH +DD G+G
Sbjct: 71 HGGPKDEERHVGDLGNVTAGKDGVANVSIEDRVISLSGEHSIIGRTMVVHEKQDDLGKGG 130
Query: 253 FNDSTTTGHAGSRVACGVIGLV 274
+ST TG+AGSR+ACGVIG+
Sbjct: 131 NEESTKTGNAGSRLACGVIGIA 152
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 66 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNP 120
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNP 66
>pdb|1CB4|A Chain A, Crystal Structure Of Copper, Zinc Superoxide Dismutase
pdb|1CB4|B Chain B, Crystal Structure Of Copper, Zinc Superoxide Dismutase
Length = 151
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/129 (51%), Positives = 89/129 (68%), Gaps = 5/129 (3%)
Query: 145 TVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQHGAPDHEVRHIG 204
TV V G +TGL + +HGFH+H+ GD +GC S G H+NP K+HG P + RH+G
Sbjct: 26 TVVVTGSITGLTEG-----DHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDDERHVG 80
Query: 205 DLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGMFNDSTTTGHAGS 264
DLGN+ A +GVA + D +ISL+G YSI+GR ++VH DD GRG +ST TG+AGS
Sbjct: 81 DLGNVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLGRGGNEESTKTGNAGS 140
Query: 265 RVACGVIGL 273
R+ACGVIG+
Sbjct: 141 RLACGVIGI 149
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 5/44 (11%)
Query: 77 TVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNP 120
TV V G +TGL + +HGFH+H+ GD +GC S G H+NP
Sbjct: 26 TVVVTGSITGLTEG-----DHGFHVHQFGDNTQGCTSAGPHFNP 64
>pdb|2E47|A Chain A, Crystal Structure Analysis Of The Clock Protein Ea4
(Glycosylation Form)
pdb|2E47|B Chain B, Crystal Structure Analysis Of The Clock Protein Ea4
(Glycosylation Form)
Length = 156
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/159 (44%), Positives = 98/159 (61%), Gaps = 5/159 (3%)
Query: 116 GHYNPQQGNSSPSVTSPSGNVTFIQHDDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDL 175
G P + + S + GN+TF Q DG V V+G +TGL E+GFH+HEKGDL
Sbjct: 3 GFTTPSRAIAVLSTETIRGNITFTQVQDGKVHVQGGITGLPPG-----EYGFHVHEKGDL 57
Query: 176 REGCASLGGHYNPQQKQHGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSIL 235
GC S G H+NP+ K HG P+ RH+GDLGN+ + + + D ISL+GP+ I+
Sbjct: 58 SGGCLSTGSHFNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGII 117
Query: 236 GRGLIVHSDKDDFGRGMFNDSTTTGHAGSRVACGVIGLV 274
GR +++H DD+G+ DS TG+AG RVACGVIG++
Sbjct: 118 GRAVVLHEKADDYGKSDHPDSRKTGNAGGRVACGVIGIL 156
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 12/75 (16%)
Query: 48 AVAVLRPYASSPSVTSPSGNVTFIQHDDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDL 107
A+AVL S + GN+TF Q DG V V+G +TGL E+GFH+HEKGDL
Sbjct: 10 AIAVL-------STETIRGNITFTQVQDGKVHVQGGITGLPPG-----EYGFHVHEKGDL 57
Query: 108 REGCASLGGHYNPQQ 122
GC S G H+NP+
Sbjct: 58 SGGCLSTGSHFNPEH 72
>pdb|3ECW|A Chain A, Crystal Structure Of The Als-Related Pathological Mutant
T54r Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECW|B Chain B, Crystal Structure Of The Als-Related Pathological Mutant
T54r Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECW|C Chain C, Crystal Structure Of The Als-Related Pathological Mutant
T54r Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECW|D Chain D, Crystal Structure Of The Als-Related Pathological Mutant
T54r Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
Length = 153
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/142 (49%), Positives = 91/142 (64%), Gaps = 6/142 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + HGFH+HE GD R GC S G H+NP ++
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNRAGCTSAGPHFNPLSRK 70
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDLGN+ A GVA ED +ISL+G + I+GR L+VH DD G+G
Sbjct: 71 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGG 130
Query: 253 FNDSTTTGHAGSRVACGVIGLV 274
+ST TG+AGSR+ACGVIG+
Sbjct: 131 NEESTKTGNAGSRLACGVIGIA 152
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 32/56 (57%), Gaps = 6/56 (10%)
Query: 66 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNP 120
G + F Q + +G V V G + GL + HGFH+HE GD R GC S G H+NP
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNRAGCTSAGPHFNP 66
>pdb|3LTV|A Chain A, Mouse-Human Sod1 Chimera
pdb|3LTV|B Chain B, Mouse-Human Sod1 Chimera
pdb|3LTV|C Chain C, Mouse-Human Sod1 Chimera
pdb|3LTV|D Chain D, Mouse-Human Sod1 Chimera
pdb|3LTV|E Chain E, Mouse-Human Sod1 Chimera
pdb|3LTV|F Chain F, Mouse-Human Sod1 Chimera
Length = 153
Score = 135 bits (340), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 91/142 (64%), Gaps = 6/142 (4%)
Query: 134 GNVTFIQHDDGT-VTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q G V + G +TGL + +HGFH+H+ GD +GC S G H+NP K+
Sbjct: 16 GTIHFEQKASGEPVVLSGQITGLTEG-----QHGFHVHQYGDNTQGCTSAGPHFNPHSKK 70
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDLGN+ A GVA ED +ISL+G + I+GR L+VH DD G+G
Sbjct: 71 HGGPADEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGG 130
Query: 253 FNDSTTTGHAGSRVACGVIGLV 274
+ST TG+AGSR+ACGVIG+
Sbjct: 131 NEESTKTGNAGSRLACGVIGIA 152
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 6/56 (10%)
Query: 66 GNVTFIQHDDGT-VTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNP 120
G + F Q G V + G +TGL + +HGFH+H+ GD +GC S G H+NP
Sbjct: 16 GTIHFEQKASGEPVVLSGQITGLTEG-----QHGFHVHQYGDNTQGCTSAGPHFNP 66
>pdb|1SOS|A Chain A, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|F Chain F, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|B Chain B, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|G Chain G, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|C Chain C, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|H Chain H, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|D Chain D, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|I Chain I, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|E Chain E, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|J Chain J, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
Length = 154
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 70/142 (49%), Positives = 91/142 (64%), Gaps = 6/142 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP ++
Sbjct: 17 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNPLSRK 71
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDLGN+ A GVA ED +ISL+G +SI+GR L+VH DD G+G
Sbjct: 72 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKGG 131
Query: 253 FNDSTTTGHAGSRVACGVIGLV 274
+ST TG+AGSR+ACGVIG+
Sbjct: 132 NEESTKTGNAGSRLACGVIGIA 153
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 38/74 (51%), Gaps = 12/74 (16%)
Query: 48 AVAVLRPYASSPSVTSPSGNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGD 106
AVAVL+ P G + F Q + +G V V G + GL + HGFH+HE GD
Sbjct: 5 AVAVLK--GDGPV----QGIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGD 53
Query: 107 LREGCASLGGHYNP 120
GC S G H+NP
Sbjct: 54 NTAGCTSAGPHFNP 67
>pdb|1L3N|A Chain A, The Solution Structure Of Reduced Dimeric Copper Zinc Sod:
The Structural Effects Of Dimerization
pdb|1L3N|B Chain B, The Solution Structure Of Reduced Dimeric Copper Zinc Sod:
The Structural Effects Of Dimerization
pdb|2AF2|A Chain A, Solution Structure Of Disulfide Reduced And Copper
Depleted Human Superoxide Dismutase
pdb|2AF2|B Chain B, Solution Structure Of Disulfide Reduced And Copper
Depleted Human Superoxide Dismutase
pdb|2LU5|A Chain A, Structure And Chemical Shifts Of Cu(I),Zn(Ii) Superoxide
Dismutase By Solid-State Nmr
Length = 153
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 70/142 (49%), Positives = 91/142 (64%), Gaps = 6/142 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP ++
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNPLSRK 70
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDLGN+ A GVA ED +ISL+G +SI+GR L+VH DD G+G
Sbjct: 71 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKGG 130
Query: 253 FNDSTTTGHAGSRVACGVIGLV 274
+ST TG+AGSR+ACGVIG+
Sbjct: 131 NEESTKTGNAGSRLACGVIGIA 152
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 38/74 (51%), Gaps = 12/74 (16%)
Query: 48 AVAVLRPYASSPSVTSPSGNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGD 106
AVAVL+ P G + F Q + +G V V G + GL + HGFH+HE GD
Sbjct: 4 AVAVLK--GDGPV----QGIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGD 52
Query: 107 LREGCASLGGHYNP 120
GC S G H+NP
Sbjct: 53 NTAGCTSAGPHFNP 66
>pdb|1N18|A Chain A, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|B Chain B, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|C Chain C, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|D Chain D, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|E Chain E, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|F Chain F, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|G Chain G, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|H Chain H, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|I Chain I, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|J Chain J, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
Length = 154
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 70/142 (49%), Positives = 91/142 (64%), Gaps = 6/142 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP ++
Sbjct: 17 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNPLSRK 71
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDLGN+ A GVA ED +ISL+G +SI+GR L+VH DD G+G
Sbjct: 72 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKGG 131
Query: 253 FNDSTTTGHAGSRVACGVIGLV 274
+ST TG+AGSR+ACGVIG+
Sbjct: 132 NEESTKTGNAGSRLACGVIGIA 153
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 38/74 (51%), Gaps = 12/74 (16%)
Query: 48 AVAVLRPYASSPSVTSPSGNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGD 106
AVAVL+ P G + F Q + +G V V G + GL + HGFH+HE GD
Sbjct: 5 AVAVLK--GDGPV----QGIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGD 53
Query: 107 LREGCASLGGHYNP 120
GC S G H+NP
Sbjct: 54 NTAGCTSAGPHFNP 67
>pdb|1FUN|A Chain A, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|F Chain F, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|B Chain B, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|G Chain G, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|C Chain C, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|H Chain H, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|D Chain D, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|I Chain I, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|E Chain E, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|J Chain J, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
Length = 153
Score = 134 bits (338), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 70/142 (49%), Positives = 91/142 (64%), Gaps = 6/142 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP ++
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNPLSRK 70
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDLGN+ A GVA ED +ISL+G +SI+GR L+VH DD G+G
Sbjct: 71 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKGG 130
Query: 253 FNDSTTTGHAGSRVACGVIGLV 274
+ST TG+AGSR+ACGVIG+
Sbjct: 131 NEESTETGNAGSRLACGVIGIA 152
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 38/74 (51%), Gaps = 12/74 (16%)
Query: 48 AVAVLRPYASSPSVTSPSGNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGD 106
AVAVL+ P G + F Q + +G V V G + GL + HGFH+HE GD
Sbjct: 4 AVAVLK--GDGPV----QGIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGD 52
Query: 107 LREGCASLGGHYNP 120
GC S G H+NP
Sbjct: 53 NTAGCTSAGPHFNP 66
>pdb|1N19|A Chain A, Structure Of The Hsod A4v Mutant
pdb|1N19|B Chain B, Structure Of The Hsod A4v Mutant
Length = 154
Score = 134 bits (338), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 70/141 (49%), Positives = 91/141 (64%), Gaps = 6/141 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP ++
Sbjct: 17 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNPLSRK 71
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDLGN+ A GVA ED +ISL+G +SI+GR L+VH DD G+G
Sbjct: 72 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKGG 131
Query: 253 FNDSTTTGHAGSRVACGVIGL 273
+ST TG+AGSR+ACGVIG+
Sbjct: 132 NEESTKTGNAGSRLACGVIGI 152
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 66 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNP 120
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP
Sbjct: 17 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNP 67
>pdb|1SDA|O Chain O, Crystal Structure Of Peroxynitrite-Modified Bovine Cu,Zn
Superoxide Dismutase
pdb|1SDA|Y Chain Y, Crystal Structure Of Peroxynitrite-Modified Bovine Cu,Zn
Superoxide Dismutase
pdb|1SDA|B Chain B, Crystal Structure Of Peroxynitrite-Modified Bovine Cu,Zn
Superoxide Dismutase
pdb|1SDA|G Chain G, Crystal Structure Of Peroxynitrite-Modified Bovine Cu,Zn
Superoxide Dismutase
Length = 152
Score = 134 bits (337), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 67/129 (51%), Positives = 88/129 (68%), Gaps = 5/129 (3%)
Query: 145 TVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQHGAPDHEVRHIG 204
TV V G +TGL + +HGFH+H+ GD +GC S G H+NP K+HG P E RH+G
Sbjct: 27 TVVVTGSITGLTEG-----DHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVG 81
Query: 205 DLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGMFNDSTTTGHAGS 264
DLGN+ A +GVA + D +ISL+G SI+GR ++VH DD GRG +ST TG+AGS
Sbjct: 82 DLGNVTADKNGVAIVDIVDPLISLSGEXSIIGRTMVVHEKPDDLGRGGNEESTKTGNAGS 141
Query: 265 RVACGVIGL 273
R+ACGVIG+
Sbjct: 142 RLACGVIGI 150
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 5/44 (11%)
Query: 77 TVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNP 120
TV V G +TGL + +HGFH+H+ GD +GC S G H+NP
Sbjct: 27 TVVVTGSITGLTEG-----DHGFHVHQFGDNTQGCTSAGPHFNP 65
>pdb|2GBT|A Chain A, C6aC111A CUZN SUPEROXIDE DISMUTASE
pdb|2GBT|B Chain B, C6aC111A CUZN SUPEROXIDE DISMUTASE
pdb|2GBT|C Chain C, C6aC111A CUZN SUPEROXIDE DISMUTASE
pdb|2GBT|D Chain D, C6aC111A CUZN SUPEROXIDE DISMUTASE
Length = 153
Score = 134 bits (336), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 91/142 (64%), Gaps = 6/142 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP ++
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNPLSRK 70
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDLGN+ A GVA ED +ISL+G ++I+GR L+VH DD G+G
Sbjct: 71 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHAIIGRTLVVHEKADDLGKGG 130
Query: 253 FNDSTTTGHAGSRVACGVIGLV 274
+ST TG+AGSR+ACGVIG+
Sbjct: 131 NEESTKTGNAGSRLACGVIGIA 152
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 38/74 (51%), Gaps = 12/74 (16%)
Query: 48 AVAVLRPYASSPSVTSPSGNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGD 106
AVAVL+ P G + F Q + +G V V G + GL + HGFH+HE GD
Sbjct: 4 AVAVLK--GDGPV----QGIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGD 52
Query: 107 LREGCASLGGHYNP 120
GC S G H+NP
Sbjct: 53 NTAGCTSAGPHFNP 66
>pdb|1MFM|A Chain A, Monomeric Human Sod Mutant F50eG51EE133Q AT ATOMIC
Resolution
pdb|1KMG|A Chain A, The Solution Structure Of Monomeric Copper-Free Superoxide
Dismutase
pdb|1RK7|A Chain A, Solution Structure Of Apo Cu,Zn Superoxide Dismutase: Role
Of Metal Ions In Protein Folding
Length = 153
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 90/142 (63%), Gaps = 6/142 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + HGFH+HE+ D GC S G H+NP ++
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEEEDNTAGCTSAGPHFNPLSRK 70
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDLGN+ A GVA ED +ISL+G +SI+GR L+VH DD G+G
Sbjct: 71 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKGG 130
Query: 253 FNDSTTTGHAGSRVACGVIGLV 274
ST TG+AGSR+ACGVIG+
Sbjct: 131 NEQSTKTGNAGSRLACGVIGIA 152
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 38/74 (51%), Gaps = 12/74 (16%)
Query: 48 AVAVLRPYASSPSVTSPSGNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGD 106
AVAVL+ P G + F Q + +G V V G + GL + HGFH+HE+ D
Sbjct: 4 AVAVLK--GDGPV----QGIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEEED 52
Query: 107 LREGCASLGGHYNP 120
GC S G H+NP
Sbjct: 53 NTAGCTSAGPHFNP 66
>pdb|2XJK|A Chain A, Monomeric Human Cu,Zn Superoxide Dismutase
Length = 153
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 91/142 (64%), Gaps = 6/142 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + HGFH+HE+ D GC S G H+NP ++
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEEEDNTAGCTSAGPHFNPLSRK 70
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDLGN+ A GVA ED +ISL+G ++I+GR L+VH DD G+G
Sbjct: 71 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHAIIGRTLVVHEKADDLGKGG 130
Query: 253 FNDSTTTGHAGSRVACGVIGLV 274
+ST TG+AGSR+ACGVIG+
Sbjct: 131 NEESTKTGNAGSRLACGVIGIA 152
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 38/74 (51%), Gaps = 12/74 (16%)
Query: 48 AVAVLRPYASSPSVTSPSGNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGD 106
AVAVL+ P G + F Q + +G V V G + GL + HGFH+HE+ D
Sbjct: 4 AVAVLK--GDGPV----QGIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEEED 52
Query: 107 LREGCASLGGHYNP 120
GC S G H+NP
Sbjct: 53 NTAGCTSAGPHFNP 66
>pdb|1BA9|A Chain A, The Solution Structure Of Reduced Monomeric Superoxide
Dismutase, Nmr, 36 Structures
Length = 153
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 90/142 (63%), Gaps = 6/142 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + HGFH+HE+ D GC S G H+NP ++
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEEEDNTAGCTSAGPHFNPLSRK 70
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDLGN+ A GVA ED +ISL+G +SI+GR L+VH DD G+G
Sbjct: 71 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKGG 130
Query: 253 FNDSTTTGHAGSRVACGVIGLV 274
ST TG+AGSR+ACGVIG+
Sbjct: 131 NEQSTKTGNAGSRLACGVIGIA 152
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 38/74 (51%), Gaps = 12/74 (16%)
Query: 48 AVAVLRPYASSPSVTSPSGNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGD 106
AVAVL+ P G + F Q + +G V V G + GL + HGFH+HE+ D
Sbjct: 4 AVAVLK--GDGPV----QGIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEEED 52
Query: 107 LREGCASLGGHYNP 120
GC S G H+NP
Sbjct: 53 NTAGCTSAGPHFNP 66
>pdb|4B3E|A Chain A, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|B Chain B, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|C Chain C, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|D Chain D, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|E Chain E, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|F Chain F, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|G Chain G, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|H Chain H, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|I Chain I, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|J Chain J, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate
Length = 154
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 90/142 (63%), Gaps = 6/142 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP ++
Sbjct: 17 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNPLSRK 71
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDLGN+ A GVA ED +ISL+G + I+GR L+VH DD G+G
Sbjct: 72 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGG 131
Query: 253 FNDSTTTGHAGSRVACGVIGLV 274
+ST TG+AGSR+ACGVIG+
Sbjct: 132 NEESTKTGNAGSRLACGVIGIA 153
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 66 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNP 120
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP
Sbjct: 17 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNP 67
>pdb|1HL4|A Chain A, The Structure Of Apo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL4|B Chain B, The Structure Of Apo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL4|C Chain C, The Structure Of Apo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL4|D Chain D, The Structure Of Apo Type Human Cu, Zn Superoxide
Dismutase
pdb|1SPD|A Chain A, Amyotrophic Lateral Sclerosis And Structural Defects In
Cu,Zn Superoxide Dismutase
pdb|1SPD|B Chain B, Amyotrophic Lateral Sclerosis And Structural Defects In
Cu,Zn Superoxide Dismutase
Length = 154
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 90/142 (63%), Gaps = 6/142 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP ++
Sbjct: 17 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNPLSRK 71
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDLGN+ A GVA ED +ISL+G + I+GR L+VH DD G+G
Sbjct: 72 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGG 131
Query: 253 FNDSTTTGHAGSRVACGVIGLV 274
+ST TG+AGSR+ACGVIG+
Sbjct: 132 NEESTKTGNAGSRLACGVIGIA 153
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 66 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNP 120
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP
Sbjct: 17 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNP 67
>pdb|1HL5|A Chain A, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|B Chain B, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|C Chain C, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|D Chain D, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|E Chain E, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|F Chain F, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|G Chain G, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|H Chain H, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|I Chain I, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|J Chain J, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|K Chain K, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|L Chain L, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|M Chain M, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|N Chain N, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|O Chain O, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|P Chain P, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|Q Chain Q, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|S Chain S, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1PU0|A Chain A, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|B Chain B, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|C Chain C, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|D Chain D, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|E Chain E, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|F Chain F, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|G Chain G, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|H Chain H, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|I Chain I, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|J Chain J, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|2C9U|A Chain A, 1.24 Angstroms Resolution Structure Of As-Isolated Cu-Zn
Human Superoxide Dismutase
pdb|2C9U|F Chain F, 1.24 Angstroms Resolution Structure Of As-Isolated Cu-Zn
Human Superoxide Dismutase
pdb|2C9V|A Chain A, Atomic Resolution Structure Of Cu-Zn Human Superoxide
Dismutase
pdb|2C9V|F Chain F, Atomic Resolution Structure Of Cu-Zn Human Superoxide
Dismutase
pdb|2V0A|A Chain A, Atomic Resolution Crystal Structure Of Human Superoxide
Dismutase
pdb|2V0A|F Chain F, Atomic Resolution Crystal Structure Of Human Superoxide
Dismutase
pdb|3ECU|A Chain A, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1)
pdb|3ECU|B Chain B, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1)
pdb|3ECU|C Chain C, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1)
pdb|3ECU|D Chain D, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1)
pdb|3KH3|A Chain A, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|B Chain B, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|C Chain C, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|D Chain D, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|E Chain E, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|F Chain F, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|G Chain G, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|H Chain H, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|I Chain I, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|J Chain J, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|K Chain K, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|L Chain L, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH4|A Chain A, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|B Chain B, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|C Chain C, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|D Chain D, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|E Chain E, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|F Chain F, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3RE0|A Chain A, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1) Complexed With Cisplatin
pdb|3RE0|B Chain B, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1) Complexed With Cisplatin
pdb|3RE0|C Chain C, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1) Complexed With Cisplatin
pdb|3RE0|D Chain D, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1) Complexed With Cisplatin
Length = 153
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 90/142 (63%), Gaps = 6/142 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP ++
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNPLSRK 70
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDLGN+ A GVA ED +ISL+G + I+GR L+VH DD G+G
Sbjct: 71 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGG 130
Query: 253 FNDSTTTGHAGSRVACGVIGLV 274
+ST TG+AGSR+ACGVIG+
Sbjct: 131 NEESTKTGNAGSRLACGVIGIA 152
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 66 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNP 120
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNP 66
>pdb|2C9S|A Chain A, 1.24 Angstroms Resolution Structure Of Zn-Zn Human
Superoxide Dismutase
pdb|2C9S|F Chain F, 1.24 Angstroms Resolution Structure Of Zn-Zn Human
Superoxide Dismutase
pdb|3T5W|A Chain A, 2me Modified Human Sod1
pdb|3T5W|B Chain B, 2me Modified Human Sod1
pdb|3T5W|D Chain D, 2me Modified Human Sod1
pdb|3T5W|E Chain E, 2me Modified Human Sod1
pdb|3T5W|F Chain F, 2me Modified Human Sod1
pdb|3T5W|G Chain G, 2me Modified Human Sod1
pdb|3T5W|H Chain H, 2me Modified Human Sod1
pdb|3T5W|I Chain I, 2me Modified Human Sod1
pdb|3T5W|J Chain J, 2me Modified Human Sod1
pdb|3T5W|K Chain K, 2me Modified Human Sod1
pdb|3T5W|L Chain L, 2me Modified Human Sod1
pdb|3T5W|M Chain M, 2me Modified Human Sod1
Length = 153
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 90/142 (63%), Gaps = 6/142 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP ++
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNPLSRK 70
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDLGN+ A GVA ED +ISL+G + I+GR L+VH DD G+G
Sbjct: 71 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHXIIGRTLVVHEKADDLGKGG 130
Query: 253 FNDSTTTGHAGSRVACGVIGLV 274
+ST TG+AGSR+ACGVIG+
Sbjct: 131 NEESTKTGNAGSRLACGVIGIA 152
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 66 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNP 120
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNP 66
>pdb|1UXM|A Chain A, A4v Mutant Of Human Sod1
pdb|1UXM|B Chain B, A4v Mutant Of Human Sod1
pdb|1UXM|C Chain C, A4v Mutant Of Human Sod1
pdb|1UXM|D Chain D, A4v Mutant Of Human Sod1
pdb|1UXM|E Chain E, A4v Mutant Of Human Sod1
pdb|1UXM|F Chain F, A4v Mutant Of Human Sod1
pdb|1UXM|G Chain G, A4v Mutant Of Human Sod1
pdb|1UXM|H Chain H, A4v Mutant Of Human Sod1
pdb|1UXM|I Chain I, A4v Mutant Of Human Sod1
pdb|1UXM|J Chain J, A4v Mutant Of Human Sod1
pdb|1UXM|K Chain K, A4v Mutant Of Human Sod1
pdb|1UXM|L Chain L, A4v Mutant Of Human Sod1
Length = 153
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/141 (48%), Positives = 90/141 (63%), Gaps = 6/141 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP ++
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNPLSRK 70
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDLGN+ A GVA ED +ISL+G + I+GR L+VH DD G+G
Sbjct: 71 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGG 130
Query: 253 FNDSTTTGHAGSRVACGVIGL 273
+ST TG+AGSR+ACGVIG+
Sbjct: 131 NEESTKTGNAGSRLACGVIGI 151
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 66 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNP 120
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNP 66
>pdb|3GZQ|A Chain A, Human Sod1 A4v Metal-Free Variant
pdb|3GZQ|B Chain B, Human Sod1 A4v Metal-Free Variant
Length = 154
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/141 (48%), Positives = 90/141 (63%), Gaps = 6/141 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP ++
Sbjct: 17 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNPLSRK 71
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDLGN+ A GVA ED +ISL+G + I+GR L+VH DD G+G
Sbjct: 72 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGG 131
Query: 253 FNDSTTTGHAGSRVACGVIGL 273
+ST TG+AGSR+ACGVIG+
Sbjct: 132 NEESTKTGNAGSRLACGVIGI 152
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 66 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNP 120
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP
Sbjct: 17 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNP 67
>pdb|1PTZ|A Chain A, Crystal Structure Of The Human Cu, Zn Superoxide
Dismutase, Familial Amyotrophic Lateral Sclerosis (Fals)
Mutant H43r
pdb|1PTZ|B Chain B, Crystal Structure Of The Human Cu, Zn Superoxide
Dismutase, Familial Amyotrophic Lateral Sclerosis (Fals)
Mutant H43r
Length = 153
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 90/142 (63%), Gaps = 6/142 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + GFH+HE GD GC S G H+NP ++
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----RGFHVHEFGDNTAGCTSAGPHFNPLSRK 70
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDLGN+ A GVA ED +ISL+G +SI+GR L+VH DD G+G
Sbjct: 71 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKGG 130
Query: 253 FNDSTTTGHAGSRVACGVIGLV 274
+ST TG+AGSR+ACGVIG+
Sbjct: 131 NEESTKTGNAGSRLACGVIGIA 152
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 37/74 (50%), Gaps = 12/74 (16%)
Query: 48 AVAVLRPYASSPSVTSPSGNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGD 106
AVAVL+ P G + F Q + +G V V G + GL + GFH+HE GD
Sbjct: 4 AVAVLK--GDGPV----QGIINFEQKESNGPVKVWGSIKGLTEGL-----RGFHVHEFGD 52
Query: 107 LREGCASLGGHYNP 120
GC S G H+NP
Sbjct: 53 NTAGCTSAGPHFNP 66
>pdb|1XSO|A Chain A, Three-Dimensional Structure Of Xenopus Laevis Cu,Zn
Superoxide Dismutase B Determined By X-Ray
Crystallography At 1.5 Angstroms Resolution
pdb|1XSO|B Chain B, Three-Dimensional Structure Of Xenopus Laevis Cu,Zn
Superoxide Dismutase B Determined By X-Ray
Crystallography At 1.5 Angstroms Resolution
Length = 150
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/139 (51%), Positives = 88/139 (63%), Gaps = 6/139 (4%)
Query: 134 GNVTFIQHDDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQH 193
G V F Q D+G V+V+G + GL HGFHIH GD GC S G H+NP+ K H
Sbjct: 15 GVVHFEQQDEGAVSVEGKIEGLTDGL-----HGFHIHVFGDNTNGCMSAGSHFNPENKNH 69
Query: 194 GAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGMF 253
GAP RH+GDLGN+ A GVA F+ D +ISL GP SI+GR +VH DD G+G
Sbjct: 70 GAPGDTDRHVGDLGNVTAE-GGVAQFKITDSLISLKGPNSIIGRTAVVHEKADDLGKGGN 128
Query: 254 NDSTTTGHAGSRVACGVIG 272
++S TG+AG R+ACGVIG
Sbjct: 129 DESLKTGNAGGRLACGVIG 147
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 66 GNVTFIQHDDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQGN 124
G V F Q D+G V+V+G + GL HGFHIH GD GC S G H+NP+ N
Sbjct: 15 GVVHFEQQDEGAVSVEGKIEGLTDGL-----HGFHIHVFGDNTNGCMSAGSHFNPENKN 68
>pdb|3MND|A Chain A, Crystallographic Analysis Of The Cystosolic CuZN
SUPEROXIDE DISMUTASE From Taenia Solium
pdb|3MND|B Chain B, Crystallographic Analysis Of The Cystosolic CuZN
SUPEROXIDE DISMUTASE From Taenia Solium
Length = 152
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/141 (49%), Positives = 87/141 (61%), Gaps = 6/141 (4%)
Query: 133 SGNVTFIQHDDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G V F Q D V V GLK +HGFH+HE GD +GC S G H+NP K
Sbjct: 14 KGVVHFTQAGD-AVKVHAEFEGLKPG-----KHGFHVHEFGDTTQGCTSAGAHFNPHGKN 67
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HGAPD RH+GDLGN+ A G A+ + DK+ISLTG +S++GR L++H D DD G G
Sbjct: 68 HGAPDAAERHVGDLGNVTAGADGKATLDLTDKMISLTGEHSVIGRSLVIHVDPDDLGLGG 127
Query: 253 FNDSTTTGHAGSRVACGVIGL 273
S TG+AG RVACG+IG+
Sbjct: 128 HELSLITGNAGGRVACGIIGI 148
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 65 SGNVTFIQHDDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQGN 124
G V F Q D V V GLK +HGFH+HE GD +GC S G H+NP N
Sbjct: 14 KGVVHFTQAGD-AVKVHAEFEGLKPG-----KHGFHVHEFGDTTQGCTSAGAHFNPHGKN 67
>pdb|1UXL|A Chain A, I113t Mutant Of Human Sod1
pdb|1UXL|B Chain B, I113t Mutant Of Human Sod1
pdb|1UXL|C Chain C, I113t Mutant Of Human Sod1
pdb|1UXL|D Chain D, I113t Mutant Of Human Sod1
pdb|1UXL|E Chain E, I113t Mutant Of Human Sod1
pdb|1UXL|F Chain F, I113t Mutant Of Human Sod1
pdb|1UXL|G Chain G, I113t Mutant Of Human Sod1
pdb|1UXL|H Chain H, I113t Mutant Of Human Sod1
pdb|1UXL|I Chain I, I113t Mutant Of Human Sod1
pdb|1UXL|J Chain J, I113t Mutant Of Human Sod1
pdb|3ECV|A Chain A, Crystal Structure Of The Als-Related Pathological Mutant
I113t Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECV|B Chain B, Crystal Structure Of The Als-Related Pathological Mutant
I113t Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECV|C Chain C, Crystal Structure Of The Als-Related Pathological Mutant
I113t Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECV|D Chain D, Crystal Structure Of The Als-Related Pathological Mutant
I113t Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|4A7G|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With 4-
Methylpiperazin-1-Yl)quinazoline In The P21 Space Group.
pdb|4A7Q|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With 4-(4-
Methyl-1,4-Diazepan-1-Yl)quinazoline In The P21 Space
Group.
pdb|4A7Q|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With 4-(4-
Methyl-1,4-Diazepan-1-Yl)quinazoline In The P21 Space
Group.
pdb|4A7S|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With 5-
Fluorouridine In The P21 Space Group
pdb|4A7S|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With 5-
Fluorouridine In The P21 Space Group
pdb|4A7T|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With
Isoproteranol In The P21 Space Group
pdb|4A7T|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With
Isoproteranol In The P21 Space Group
pdb|4A7U|A Chain A, Structure Of Human I113t Sod1 Complexed With Adrenaline In
The P21 Space Group.
pdb|4A7U|F Chain F, Structure Of Human I113t Sod1 Complexed With Adrenaline In
The P21 Space Group.
pdb|4A7V|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With
Dopamine In The P21 Space Group
pdb|4A7V|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With
Dopamine In The P21 Space Group
Length = 153
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 89/142 (62%), Gaps = 6/142 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP ++
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNPLSRK 70
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDLGN+ A GVA ED +ISL+G + I GR L+VH DD G+G
Sbjct: 71 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCITGRTLVVHEKADDLGKGG 130
Query: 253 FNDSTTTGHAGSRVACGVIGLV 274
+ST TG+AGSR+ACGVIG+
Sbjct: 131 NEESTKTGNAGSRLACGVIGIA 152
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 66 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNP 120
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNP 66
>pdb|2WYT|A Chain A, 1.0 A Resolution Structure Of L38v Sod1 Mutant
pdb|2WYT|F Chain F, 1.0 A Resolution Structure Of L38v Sod1 Mutant
pdb|2WZ0|A Chain A, L38v Sod1 Mutant Complexed With Aniline.
pdb|2WZ0|F Chain F, L38v Sod1 Mutant Complexed With Aniline.
pdb|2WZ5|A Chain A, L38v Sod1 Mutant Complexed With L-Methionine.
pdb|2WZ5|F Chain F, L38v Sod1 Mutant Complexed With L-Methionine
Length = 153
Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/141 (48%), Positives = 90/141 (63%), Gaps = 6/141 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + G+ + HGFH+HE GD GC S G H+NP ++
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGVTEGL-----HGFHVHEFGDNTAGCTSAGPHFNPLSRK 70
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDLGN+ A GVA ED +ISL+G + I+GR L+VH DD G+G
Sbjct: 71 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGG 130
Query: 253 FNDSTTTGHAGSRVACGVIGL 273
+ST TG+AGSR+ACGVIG+
Sbjct: 131 NEESTKTGNAGSRLACGVIGI 151
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 66 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNP 120
G + F Q + +G V V G + G+ + HGFH+HE GD GC S G H+NP
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGVTEGL-----HGFHVHEFGDNTAGCTSAGPHFNP 66
>pdb|1OZU|A Chain A, Crystal Structure Of Familial Als Mutant S134n Of Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 1.3a Resolution
pdb|1OZU|B Chain B, Crystal Structure Of Familial Als Mutant S134n Of Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 1.3a Resolution
Length = 153
Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 90/142 (63%), Gaps = 6/142 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP ++
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNPLSRK 70
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDLGN+ A GVA ED +ISL+G + I+GR L+VH DD G+G
Sbjct: 71 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHXIIGRTLVVHEKADDLGKGG 130
Query: 253 FNDSTTTGHAGSRVACGVIGLV 274
++T TG+AGSR+ACGVIG+
Sbjct: 131 NEENTKTGNAGSRLACGVIGIA 152
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 66 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNP 120
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNP 66
>pdb|2WYZ|A Chain A, L38v Sod1 Mutant Complexed With Ump
pdb|2WYZ|F Chain F, L38v Sod1 Mutant Complexed With Ump
Length = 153
Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/141 (48%), Positives = 90/141 (63%), Gaps = 6/141 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + G+ + HGFH+HE GD GC S G H+NP ++
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGVTEGL-----HGFHVHEFGDNTAGCTSAGPHFNPLSRK 70
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDLGN+ A GVA ED +ISL+G + I+GR L+VH DD G+G
Sbjct: 71 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHXIIGRTLVVHEKADDLGKGG 130
Query: 253 FNDSTTTGHAGSRVACGVIGL 273
+ST TG+AGSR+ACGVIG+
Sbjct: 131 NEESTKTGNAGSRLACGVIGI 151
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 66 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNP 120
G + F Q + +G V V G + G+ + HGFH+HE GD GC S G H+NP
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGVTEGL-----HGFHVHEFGDNTAGCTSAGPHFNP 66
>pdb|2WKO|F Chain F, Structure Of Metal Loaded Pathogenic Sod1 Mutant G93a
Length = 154
Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 89/142 (62%), Gaps = 6/142 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP ++
Sbjct: 17 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNPLSRK 71
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDLGN+ A VA ED +ISL+G + I+GR L+VH DD G+G
Sbjct: 72 HGGPKDEERHVGDLGNVTADKDAVADVSIEDSVISLSGDHXIIGRTLVVHEKADDLGKGG 131
Query: 253 FNDSTTTGHAGSRVACGVIGLV 274
+ST TG+AGSR+ACGVIG+
Sbjct: 132 NEESTKTGNAGSRLACGVIGIA 153
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 66 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNP 120
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP
Sbjct: 17 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNP 67
>pdb|3GZP|A Chain A, Human Sod1 G93a Metal-Free Variant
pdb|3GZP|B Chain B, Human Sod1 G93a Metal-Free Variant
pdb|3GZP|C Chain C, Human Sod1 G93a Metal-Free Variant
pdb|3GZP|D Chain D, Human Sod1 G93a Metal-Free Variant
pdb|2WZ6|A Chain A, G93a Sod1 Mutant Complexed With Quinazoline.
pdb|2WZ6|F Chain F, G93a Sod1 Mutant Complexed With Quinazoline
Length = 153
Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 89/142 (62%), Gaps = 6/142 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP ++
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNPLSRK 70
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDLGN+ A VA ED +ISL+G + I+GR L+VH DD G+G
Sbjct: 71 HGGPKDEERHVGDLGNVTADKDAVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGG 130
Query: 253 FNDSTTTGHAGSRVACGVIGLV 274
+ST TG+AGSR+ACGVIG+
Sbjct: 131 NEESTKTGNAGSRLACGVIGIA 152
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 66 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNP 120
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNP 66
>pdb|3GZO|A Chain A, Human Sod1 G93a Variant
pdb|3GZO|B Chain B, Human Sod1 G93a Variant
pdb|3GZO|C Chain C, Human Sod1 G93a Variant
pdb|3GZO|D Chain D, Human Sod1 G93a Variant
pdb|3GZO|E Chain E, Human Sod1 G93a Variant
pdb|3GZO|F Chain F, Human Sod1 G93a Variant
pdb|3GZO|G Chain G, Human Sod1 G93a Variant
pdb|3GZO|H Chain H, Human Sod1 G93a Variant
pdb|3GZO|I Chain I, Human Sod1 G93a Variant
pdb|3GZO|J Chain J, Human Sod1 G93a Variant
pdb|2WKO|A Chain A, Structure Of Metal Loaded Pathogenic Sod1 Mutant G93a
Length = 154
Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 89/142 (62%), Gaps = 6/142 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP ++
Sbjct: 17 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNPLSRK 71
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDLGN+ A VA ED +ISL+G + I+GR L+VH DD G+G
Sbjct: 72 HGGPKDEERHVGDLGNVTADKDAVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGG 131
Query: 253 FNDSTTTGHAGSRVACGVIGLV 274
+ST TG+AGSR+ACGVIG+
Sbjct: 132 NEESTKTGNAGSRLACGVIGIA 153
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 66 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNP 120
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP
Sbjct: 17 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNP 67
>pdb|4A7G|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With 4-
Methylpiperazin-1-Yl)quinazoline In The P21 Space Group
Length = 153
Score = 130 bits (328), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 89/142 (62%), Gaps = 6/142 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP ++
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNPLSRK 70
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDLGN+ A GVA ED +ISL+G + I GR L+VH DD G+G
Sbjct: 71 HGGPKDEERHVGDLGNVTADKDGVADVSTEDSVISLSGDHCITGRTLVVHEKADDLGKGG 130
Query: 253 FNDSTTTGHAGSRVACGVIGLV 274
+ST TG+AGSR+ACGVIG+
Sbjct: 131 NEESTKTGNAGSRLACGVIGIA 152
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 66 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNP 120
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNP 66
>pdb|2ZKY|A Chain A, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|B Chain B, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|C Chain C, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|D Chain D, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|E Chain E, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|F Chain F, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|G Chain G, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|H Chain H, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|I Chain I, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|J Chain J, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
Length = 159
Score = 130 bits (328), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 89/142 (62%), Gaps = 6/142 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP ++
Sbjct: 22 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNPLSRK 76
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDLGN+ A VA ED +ISL+G + I+GR L+VH DD G+G
Sbjct: 77 HGGPKDEERHVGDLGNVTADKDAVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGG 136
Query: 253 FNDSTTTGHAGSRVACGVIGLV 274
+ST TG+AGSR+ACGVIG+
Sbjct: 137 NEESTKTGNAGSRLACGVIGIA 158
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 66 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNP 120
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP
Sbjct: 22 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNP 72
>pdb|1DSW|A Chain A, The Solution Structure Of A Monomeric, Reduced Form Of
Human Copper, Zinc Superoxide Dismutase Bearing The Same
Charge As The Native Protein
Length = 153
Score = 130 bits (328), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/140 (48%), Positives = 89/140 (63%), Gaps = 6/140 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + HGFH+HE+ D GC S G H+NP ++
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEEEDNTAGCTSAGPHFNPLSRK 70
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDLGN+ A GVA ED +ISL+G +SI+GR L+VH DD G+G
Sbjct: 71 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKGG 130
Query: 253 FNDSTTTGHAGSRVACGVIG 272
+ST TG+AGSR+ACG IG
Sbjct: 131 NEESTKTGNAGSRLACGKIG 150
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 38/74 (51%), Gaps = 12/74 (16%)
Query: 48 AVAVLRPYASSPSVTSPSGNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGD 106
AVAVL+ P G + F Q + +G V V G + GL + HGFH+HE+ D
Sbjct: 4 AVAVLK--GDGPV----QGIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEEED 52
Query: 107 LREGCASLGGHYNP 120
GC S G H+NP
Sbjct: 53 NTAGCTSAGPHFNP 66
>pdb|1F1G|A Chain A, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|B Chain B, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|C Chain C, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|D Chain D, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|E Chain E, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|F Chain F, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
Length = 154
Score = 130 bits (328), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 59/110 (53%), Positives = 78/110 (70%)
Query: 164 EHGFHIHEKGDLREGCASLGGHYNPQQKQHGAPDHEVRHIGDLGNIEASPSGVASFEFED 223
E GFHIHE GD GC S G H+NP +K HGAP EVRH+GD+GN++ +GVA F+D
Sbjct: 43 ERGFHIHEFGDATNGCVSAGPHFNPFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSFKD 102
Query: 224 KIISLTGPYSILGRGLIVHSDKDDFGRGMFNDSTTTGHAGSRVACGVIGL 273
+I L GP S++GR +++H+ +DD G+G +S TG+AG R ACGVIGL
Sbjct: 103 SLIKLIGPTSVVGRSVVIHAGQDDLGKGDTEESLKTGNAGPRPACGVIGL 152
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 46 IVAVAVLRPYASSPSVTSPSGNVTFIQHDDGTVTVKGF-VTGLKKNTAGSQEHGFHIHEK 104
+ AVAVL+ A SG V F Q + T + + G N E GFHIHE
Sbjct: 2 VQAVAVLKGDAGV------SGVVKFEQASESEPTTVSYEIAGNSPNA----ERGFHIHEF 51
Query: 105 GDLREGCASLGGHYNP 120
GD GC S G H+NP
Sbjct: 52 GDATNGCVSAGPHFNP 67
>pdb|1OEZ|W Chain W, Zn His46arg Mutant Of Human Cu, Zn Superoxide Dismutase
pdb|1OEZ|X Chain X, Zn His46arg Mutant Of Human Cu, Zn Superoxide Dismutase
pdb|1OEZ|Y Chain Y, Zn His46arg Mutant Of Human Cu, Zn Superoxide Dismutase
pdb|1OEZ|Z Chain Z, Zn His46arg Mutant Of Human Cu, Zn Superoxide Dismutase
pdb|1OZT|M Chain M, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|N Chain N, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|G Chain G, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|H Chain H, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|K Chain K, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|L Chain L, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|I Chain I, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|J Chain J, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
Length = 153
Score = 130 bits (327), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 89/142 (62%), Gaps = 6/142 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + HGF +HE GD GC S G H+NP ++
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFRVHEFGDNTAGCTSAGPHFNPLSRK 70
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDLGN+ A GVA ED +ISL+G + I+GR L+VH DD G+G
Sbjct: 71 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGG 130
Query: 253 FNDSTTTGHAGSRVACGVIGLV 274
+ST TG+AGSR+ACGVIG+
Sbjct: 131 NEESTKTGNAGSRLACGVIGIA 152
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 66 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNP 120
G + F Q + +G V V G + GL + HGF +HE GD GC S G H+NP
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFRVHEFGDNTAGCTSAGPHFNP 66
>pdb|3H2Q|A Chain A, Human Sod1 H80r Variant, P21 Crystal Form
pdb|3H2Q|B Chain B, Human Sod1 H80r Variant, P21 Crystal Form
pdb|3H2Q|C Chain C, Human Sod1 H80r Variant, P21 Crystal Form
pdb|3H2Q|D Chain D, Human Sod1 H80r Variant, P21 Crystal Form
Length = 153
Score = 130 bits (327), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 89/142 (62%), Gaps = 6/142 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP ++
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNPLSRK 70
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E R +GDLGN+ A GVA ED +ISL+G + I+GR L+VH DD G+G
Sbjct: 71 HGGPKDEERRVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGG 130
Query: 253 FNDSTTTGHAGSRVACGVIGLV 274
+ST TG+AGSR+ACGVIG+
Sbjct: 131 NEESTKTGNAGSRLACGVIGIA 152
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 66 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNP 120
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNP 66
>pdb|1SDY|A Chain A, Structure Solution And Molecular Dynamics Refinement Of
The Yeast Cu,Zn Enzyme Superoxide Dismutase
pdb|1SDY|B Chain B, Structure Solution And Molecular Dynamics Refinement Of
The Yeast Cu,Zn Enzyme Superoxide Dismutase
pdb|1SDY|C Chain C, Structure Solution And Molecular Dynamics Refinement Of
The Yeast Cu,Zn Enzyme Superoxide Dismutase
pdb|1SDY|D Chain D, Structure Solution And Molecular Dynamics Refinement Of
The Yeast Cu,Zn Enzyme Superoxide Dismutase
pdb|1B4L|A Chain A, 15 Atmosphere Oxygen Yeast CuZN SUPEROXIDE DISMUTASE ROOM
Temperature (298k) Structure
pdb|1YAZ|A Chain A, Azide-Bound Yeast Cu(Ii)ZN SUPEROXIDE DISMUTASE ROOM
Temperature (298k) Structure
pdb|1JCV|A Chain A, Reduced Bridge-Broken Yeast CuZN SUPEROXIDE DISMUTASE LOW
TEMPERATURE (-180c) Structure
pdb|1YSO|A Chain A, Yeast Cu, Zn Superoxide Dismutase With The Reduced Bridge
Broken
pdb|2JCW|A Chain A, Reduced Bridge-Broken Yeast CuZN SUPEROXIDE DISMUTASE ROOM
Temperature (298k) Structure
Length = 153
Score = 130 bits (327), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 59/110 (53%), Positives = 78/110 (70%)
Query: 164 EHGFHIHEKGDLREGCASLGGHYNPQQKQHGAPDHEVRHIGDLGNIEASPSGVASFEFED 223
E GFHIHE GD GC S G H+NP +K HGAP EVRH+GD+GN++ +GVA F+D
Sbjct: 42 ERGFHIHEFGDATNGCVSAGPHFNPFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSFKD 101
Query: 224 KIISLTGPYSILGRGLIVHSDKDDFGRGMFNDSTTTGHAGSRVACGVIGL 273
+I L GP S++GR +++H+ +DD G+G +S TG+AG R ACGVIGL
Sbjct: 102 SLIKLIGPTSVVGRSVVIHAGQDDLGKGDTEESLKTGNAGPRPACGVIGL 151
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 46 IVAVAVLRPYASSPSVTSPSGNVTFIQHDDGTVTVKGF-VTGLKKNTAGSQEHGFHIHEK 104
+ AVAVL+ A SG V F Q + T + + G N E GFHIHE
Sbjct: 1 VQAVAVLKGDAGV------SGVVKFEQASESEPTTVSYEIAGNSPNA----ERGFHIHEF 50
Query: 105 GDLREGCASLGGHYNP 120
GD GC S G H+NP
Sbjct: 51 GDATNGCVSAGPHFNP 66
>pdb|3QQD|A Chain A, Human Sod1 H80r Variant, P212121 Crystal Form
pdb|3QQD|B Chain B, Human Sod1 H80r Variant, P212121 Crystal Form
Length = 154
Score = 130 bits (327), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 89/142 (62%), Gaps = 6/142 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP ++
Sbjct: 17 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNPLSRK 71
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E R +GDLGN+ A GVA ED +ISL+G + I+GR L+VH DD G+G
Sbjct: 72 HGGPKDEERRVGDLGNVTADKDGVADVSIEDSVISLSGDHXIIGRTLVVHEKADDLGKGG 131
Query: 253 FNDSTTTGHAGSRVACGVIGLV 274
+ST TG+AGSR+ACGVIG+
Sbjct: 132 NEESTKTGNAGSRLACGVIGIA 153
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 66 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNP 120
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP
Sbjct: 17 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNP 67
>pdb|2ZKW|A Chain A, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group P21
pdb|2ZKW|B Chain B, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group P21
pdb|2ZKX|A Chain A, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group I212121
pdb|2ZKX|B Chain B, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group I212121
pdb|2ZKX|C Chain C, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group I212121
pdb|2ZKX|D Chain D, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group I212121
Length = 159
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 89/142 (62%), Gaps = 6/142 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP ++
Sbjct: 22 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNPLSRK 76
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDL N+ A GVA ED +ISL+G + I+GR L+VH DD G+G
Sbjct: 77 HGGPKDEERHVGDLRNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGG 136
Query: 253 FNDSTTTGHAGSRVACGVIGLV 274
+ST TG+AGSR+ACGVIG+
Sbjct: 137 NEESTKTGNAGSRLACGVIGIA 158
>pdb|2VR8|A Chain A, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.36 A Resolution
pdb|2VR8|F Chain F, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.36 A Resolution
Length = 154
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 89/142 (62%), Gaps = 6/142 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP ++
Sbjct: 17 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNPLSRK 71
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDL N+ A GVA ED +ISL+G + I+GR L+VH DD G+G
Sbjct: 72 HGGPKDEERHVGDLRNVTADKDGVADVSIEDSVISLSGDHXIIGRTLVVHEKADDLGKGG 131
Query: 253 FNDSTTTGHAGSRVACGVIGLV 274
+ST TG+AGSR+ACGVIG+
Sbjct: 132 NEESTKTGNAGSRLACGVIGIA 153
>pdb|3CQQ|A Chain A, Human Sod1 G85r Variant, Structure Ii
pdb|3CQQ|B Chain B, Human Sod1 G85r Variant, Structure Ii
Length = 153
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 89/142 (62%), Gaps = 6/142 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP ++
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNPLSRK 70
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDL N+ A GVA ED +ISL+G + I+GR L+VH DD G+G
Sbjct: 71 HGGPKDEERHVGDLRNVTADKDGVADVSIEDSVISLSGDHXIIGRTLVVHEKADDLGKGG 130
Query: 253 FNDSTTTGHAGSRVACGVIGLV 274
+ST TG+AGSR+ACGVIG+
Sbjct: 131 NEESTKTGNAGSRLACGVIGIA 152
>pdb|2VR7|A Chain A, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.58 A Resolution
pdb|2VR7|F Chain F, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.58 A Resolution
Length = 154
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 89/142 (62%), Gaps = 6/142 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP ++
Sbjct: 17 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNPLSRK 71
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDL N+ A GVA ED +ISL+G + I+GR L+VH DD G+G
Sbjct: 72 HGGPKDEERHVGDLRNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGG 131
Query: 253 FNDSTTTGHAGSRVACGVIGLV 274
+ST TG+AGSR+ACGVIG+
Sbjct: 132 NEESTKTGNAGSRLACGVIGIA 153
>pdb|2VR6|A Chain A, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.3 A Resolution
pdb|2VR6|F Chain F, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.3 A Resolution
pdb|3CQP|A Chain A, Human Sod1 G85r Variant, Structure I
pdb|3CQP|B Chain B, Human Sod1 G85r Variant, Structure I
pdb|3CQP|C Chain C, Human Sod1 G85r Variant, Structure I
pdb|3CQP|D Chain D, Human Sod1 G85r Variant, Structure I
Length = 153
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 89/142 (62%), Gaps = 6/142 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP ++
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNPLSRK 70
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDL N+ A GVA ED +ISL+G + I+GR L+VH DD G+G
Sbjct: 71 HGGPKDEERHVGDLRNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGG 130
Query: 253 FNDSTTTGHAGSRVACGVIGLV 274
+ST TG+AGSR+ACGVIG+
Sbjct: 131 NEESTKTGNAGSRLACGVIGIA 152
>pdb|1AZV|A Chain A, Familial Als Mutant G37r Cuznsod (Human)
pdb|1AZV|B Chain B, Familial Als Mutant G37r Cuznsod (Human)
Length = 153
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 89/142 (62%), Gaps = 6/142 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + L + HGFH+HE GD GC S G H+NP ++
Sbjct: 16 GIINFEQKESNGPVKVWGSIKRLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNPLSRK 70
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDLGN+ A GVA ED +ISL+G + I+GR L+VH DD G+G
Sbjct: 71 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGG 130
Query: 253 FNDSTTTGHAGSRVACGVIGLV 274
+ST TG+AGSR+ACGVIG+
Sbjct: 131 NEESTKTGNAGSRLACGVIGIA 152
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 66 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNP 120
G + F Q + +G V V G + L + HGFH+HE GD GC S G H+NP
Sbjct: 16 GIINFEQKESNGPVKVWGSIKRLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNP 66
>pdb|4BCY|A Chain A, Monomeric Human Cu,zn Superoxide Dismutase, Mutation H43f
Length = 153
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/142 (47%), Positives = 90/142 (63%), Gaps = 6/142 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + GFH+HE+ D GC S G H+NP ++
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----FGFHVHEEEDNTAGCTSAGPHFNPLSRK 70
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDLGN+ A GVA ED +ISL+G ++I+GR L+VH DD G+G
Sbjct: 71 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHAIIGRTLVVHEKADDLGKGG 130
Query: 253 FNDSTTTGHAGSRVACGVIGLV 274
+ST TG+AGSR+ACGVIG+
Sbjct: 131 NEESTKTGNAGSRLACGVIGIA 152
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 12/74 (16%)
Query: 48 AVAVLRPYASSPSVTSPSGNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGD 106
AVAVL+ P G + F Q + +G V V G + GL + GFH+HE+ D
Sbjct: 4 AVAVLK--GDGPV----QGIINFEQKESNGPVKVWGSIKGLTEGL-----FGFHVHEEED 52
Query: 107 LREGCASLGGHYNP 120
GC S G H+NP
Sbjct: 53 NTAGCTSAGPHFNP 66
>pdb|2R27|A Chain A, Constitutively Zinc-Deficient Mutant Of Human Superoxide
Dismutase (Sod), C6a, H80s, H83s, C111s
pdb|2R27|B Chain B, Constitutively Zinc-Deficient Mutant Of Human Superoxide
Dismutase (Sod), C6a, H80s, H83s, C111s
Length = 154
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 89/142 (62%), Gaps = 6/142 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP ++
Sbjct: 17 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNPLSRK 71
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E R +G LGN+ A GVA ED +ISL+G +SI+GR L+VH DD G+G
Sbjct: 72 HGGPKDEERSVGSLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKGG 131
Query: 253 FNDSTTTGHAGSRVACGVIGLV 274
+ST TG+AGSR+ACGVIG+
Sbjct: 132 NEESTKTGNAGSRLACGVIGIA 153
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 38/74 (51%), Gaps = 12/74 (16%)
Query: 48 AVAVLRPYASSPSVTSPSGNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGD 106
AVAVL+ P G + F Q + +G V V G + GL + HGFH+HE GD
Sbjct: 5 AVAVLK--GDGPV----QGIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGD 53
Query: 107 LREGCASLGGHYNP 120
GC S G H+NP
Sbjct: 54 NTAGCTSAGPHFNP 67
>pdb|1P1V|A Chain A, Crystal Structure Of Fals-Associated Human Copper-Zinc
Superoxide Dismutase (Cuznsod) Mutant D125h To 1.4a
pdb|1P1V|B Chain B, Crystal Structure Of Fals-Associated Human Copper-Zinc
Superoxide Dismutase (Cuznsod) Mutant D125h To 1.4a
pdb|1P1V|C Chain C, Crystal Structure Of Fals-Associated Human Copper-Zinc
Superoxide Dismutase (Cuznsod) Mutant D125h To 1.4a
Length = 153
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 89/142 (62%), Gaps = 6/142 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP ++
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNPLSRK 70
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDLGN+ A GVA ED +ISL+G + I+GR L+VH D G+G
Sbjct: 71 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHXIIGRTLVVHEKADHLGKGG 130
Query: 253 FNDSTTTGHAGSRVACGVIGLV 274
+ST TG+AGSR+ACGVIG+
Sbjct: 131 NEESTKTGNAGSRLACGVIGIA 152
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 66 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNP 120
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNP 66
>pdb|3H2P|A Chain A, Human Sod1 D124v Variant
pdb|3H2P|B Chain B, Human Sod1 D124v Variant
Length = 153
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/141 (48%), Positives = 89/141 (63%), Gaps = 6/141 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP ++
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNPLSRK 70
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDLGN+ A GVA ED +ISL+G + I+GR L+VH D G+G
Sbjct: 71 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKAVDLGKGG 130
Query: 253 FNDSTTTGHAGSRVACGVIGL 273
+ST TG+AGSR+ACGVIG+
Sbjct: 131 NEESTKTGNAGSRLACGVIGI 151
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 66 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNP 120
G + F Q + +G V V G + GL + HGFH+HE GD GC S G H+NP
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGCTSAGPHFNP 66
>pdb|1F1A|A Chain A, Crystal Structure Of Yeast H48q Cuznsod Fals Mutant Analog
Length = 154
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 58/110 (52%), Positives = 77/110 (70%)
Query: 164 EHGFHIHEKGDLREGCASLGGHYNPQQKQHGAPDHEVRHIGDLGNIEASPSGVASFEFED 223
E GFHI E GD GC S G H+NP +K HGAP EVRH+GD+GN++ +GVA F+D
Sbjct: 43 ERGFHIQEFGDATNGCVSAGPHFNPFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSFKD 102
Query: 224 KIISLTGPYSILGRGLIVHSDKDDFGRGMFNDSTTTGHAGSRVACGVIGL 273
+I L GP S++GR +++H+ +DD G+G +S TG+AG R ACGVIGL
Sbjct: 103 SLIKLIGPTSVVGRSVVIHAGQDDLGKGDTEESLKTGNAGPRPACGVIGL 152
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 35/76 (46%), Gaps = 11/76 (14%)
Query: 46 IVAVAVLRPYASSPSVTSPSGNVTFIQHDDGTVTVKGF-VTGLKKNTAGSQEHGFHIHEK 104
+ AVAVL+ A SG V F Q + T + + G N E GFHI E
Sbjct: 2 VQAVAVLKGDAGV------SGVVKFEQASESEPTTVSYEIAGNSPNA----ERGFHIQEF 51
Query: 105 GDLREGCASLGGHYNP 120
GD GC S G H+NP
Sbjct: 52 GDATNGCVSAGPHFNP 67
>pdb|3GQF|A Chain A, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|B Chain B, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|C Chain C, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|D Chain D, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|E Chain E, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|F Chain F, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3K91|A Chain A, Polysulfane Bridge In Cu-Zn Superoxide Dismutase
pdb|3K91|B Chain B, Polysulfane Bridge In Cu-Zn Superoxide Dismutase
Length = 153
Score = 128 bits (321), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/142 (47%), Positives = 88/142 (61%), Gaps = 6/142 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + HGF + E GD GC S G H+NP ++
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFRVQEFGDNTAGCTSAGPHFNPLSRK 70
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDLGN+ A GVA ED +ISL+G + I+GR L+VH DD G+G
Sbjct: 71 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGG 130
Query: 253 FNDSTTTGHAGSRVACGVIGLV 274
+ST TG+AGSR+ACGVIG+
Sbjct: 131 NEESTKTGNAGSRLACGVIGIA 152
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
Query: 66 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNP 120
G + F Q + +G V V G + GL + HGF + E GD GC S G H+NP
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFRVQEFGDNTAGCTSAGPHFNP 66
>pdb|2NNX|A Chain A, Crystal Structure Of The H46r, H48q Double Mutant Of Human
[cu-Zn] Superoxide Dismutase
pdb|2NNX|B Chain B, Crystal Structure Of The H46r, H48q Double Mutant Of Human
[cu-Zn] Superoxide Dismutase
pdb|2NNX|C Chain C, Crystal Structure Of The H46r, H48q Double Mutant Of Human
[cu-Zn] Superoxide Dismutase
pdb|2NNX|D Chain D, Crystal Structure Of The H46r, H48q Double Mutant Of Human
[cu-Zn] Superoxide Dismutase
Length = 154
Score = 128 bits (321), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/142 (47%), Positives = 88/142 (61%), Gaps = 6/142 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + HGF + E GD GC S G H+NP ++
Sbjct: 17 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFRVQEFGDNTAGCTSAGPHFNPLSRK 71
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDLGN+ A GVA ED +ISL+G + I+GR L+VH DD G+G
Sbjct: 72 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGG 131
Query: 253 FNDSTTTGHAGSRVACGVIGLV 274
+ST TG+AGSR+ACGVIG+
Sbjct: 132 NEESTKTGNAGSRLACGVIGIA 153
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
Query: 66 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNP 120
G + F Q + +G V V G + GL + HGF + E GD GC S G H+NP
Sbjct: 17 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFRVQEFGDNTAGCTSAGPHFNP 67
>pdb|1F18|A Chain A, Crystal Structure Of Yeast Copper-Zinc Superoxide
Dismutase Mutant Gly85arg
Length = 154
Score = 127 bits (320), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 66/142 (46%), Positives = 88/142 (61%), Gaps = 5/142 (3%)
Query: 133 SGNVTFIQHDDGTVTVKGF-VTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQK 191
SG V F Q + T + + G N E GFHIHE GD GC S G H+NP +K
Sbjct: 15 SGVVKFEQASESEPTTVSYEIAGNSPNA----ERGFHIHEFGDATNGCVSAGPHFNPFKK 70
Query: 192 QHGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRG 251
HGAP EVRH+GD+ N++ +GVA F+D +I L GP S++GR +++H+ +DD G+G
Sbjct: 71 THGAPTDEVRHVGDMRNVKTDENGVAKGSFKDSLIKLIGPTSVVGRSVVIHAGQDDLGKG 130
Query: 252 MFNDSTTTGHAGSRVACGVIGL 273
+S TG+AG R ACGVIGL
Sbjct: 131 DTEESLKTGNAGPRPACGVIGL 152
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 46 IVAVAVLRPYASSPSVTSPSGNVTFIQHDDGTVTVKGF-VTGLKKNTAGSQEHGFHIHEK 104
+ AVAVL+ A SG V F Q + T + + G N E GFHIHE
Sbjct: 2 VQAVAVLKGDAGV------SGVVKFEQASESEPTTVSYEIAGNSPNA----ERGFHIHEF 51
Query: 105 GDLREGCASLGGHYNP 120
GD GC S G H+NP
Sbjct: 52 GDATNGCVSAGPHFNP 67
>pdb|1JK9|A Chain A, Heterodimer Between H48f-Ysod1 And Yccs
pdb|1JK9|C Chain C, Heterodimer Between H48f-Ysod1 And Yccs
Length = 153
Score = 127 bits (320), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 58/110 (52%), Positives = 77/110 (70%)
Query: 164 EHGFHIHEKGDLREGCASLGGHYNPQQKQHGAPDHEVRHIGDLGNIEASPSGVASFEFED 223
E GFHI E GD GC S G H+NP +K HGAP EVRH+GD+GN++ +GVA F+D
Sbjct: 42 ERGFHIFEFGDATNGCVSAGPHFNPFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSFKD 101
Query: 224 KIISLTGPYSILGRGLIVHSDKDDFGRGMFNDSTTTGHAGSRVACGVIGL 273
+I L GP S++GR +++H+ +DD G+G +S TG+AG R ACGVIGL
Sbjct: 102 SLIKLIGPTSVVGRSVVIHAGQDDLGKGDTEESLKTGNAGPRPACGVIGL 151
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 35/76 (46%), Gaps = 11/76 (14%)
Query: 46 IVAVAVLRPYASSPSVTSPSGNVTFIQHDDGTVTVKGF-VTGLKKNTAGSQEHGFHIHEK 104
+ AVAVL+ A SG V F Q + T + + G N E GFHI E
Sbjct: 1 VQAVAVLKGDAGV------SGVVKFEQASESEPTTVSYEIAGNSPNA----ERGFHIFEF 50
Query: 105 GDLREGCASLGGHYNP 120
GD GC S G H+NP
Sbjct: 51 GDATNGCVSAGPHFNP 66
>pdb|1B4T|A Chain A, H48c Yeast Cu(Ii)ZN SUPEROXIDE DISMUTASE ROOM TEMPERATURE
(298k) Structure
Length = 153
Score = 127 bits (319), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 66/142 (46%), Positives = 88/142 (61%), Gaps = 5/142 (3%)
Query: 133 SGNVTFIQHDDGTVTVKGF-VTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQK 191
SG V F Q + T + + G N E GFHI E GD GC S G H+NP +K
Sbjct: 14 SGVVKFEQASESEPTTVSYEIAGNSPNA----ERGFHICEFGDATNGCVSAGPHFNPFKK 69
Query: 192 QHGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRG 251
HGAP EVRH+GD+GN++ +GVA F+D +I L GP S++GR +++H+ +DD G+G
Sbjct: 70 THGAPTDEVRHVGDMGNVKTDENGVAKGSFKDSLIKLIGPTSVVGRSVVIHAGQDDLGKG 129
Query: 252 MFNDSTTTGHAGSRVACGVIGL 273
+S TG+AG R ACGVIGL
Sbjct: 130 DTEESLKTGNAGPRPACGVIGL 151
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 35/76 (46%), Gaps = 11/76 (14%)
Query: 46 IVAVAVLRPYASSPSVTSPSGNVTFIQHDDGTVTVKGF-VTGLKKNTAGSQEHGFHIHEK 104
+ AVAVL+ A SG V F Q + T + + G N E GFHI E
Sbjct: 1 VQAVAVLKGDAGV------SGVVKFEQASESEPTTVSYEIAGNSPNA----ERGFHICEF 50
Query: 105 GDLREGCASLGGHYNP 120
GD GC S G H+NP
Sbjct: 51 GDATNGCVSAGPHFNP 66
>pdb|1F1D|A Chain A, Crystal Structure Of Yeast H46c Cuznsod Mutant
Length = 154
Score = 127 bits (319), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 58/110 (52%), Positives = 77/110 (70%)
Query: 164 EHGFHIHEKGDLREGCASLGGHYNPQQKQHGAPDHEVRHIGDLGNIEASPSGVASFEFED 223
E GF IHE GD GC S G H+NP +K HGAP EVRH+GD+GN++ +GVA F+D
Sbjct: 43 ERGFCIHEFGDATNGCVSAGPHFNPFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSFKD 102
Query: 224 KIISLTGPYSILGRGLIVHSDKDDFGRGMFNDSTTTGHAGSRVACGVIGL 273
+I L GP S++GR +++H+ +DD G+G +S TG+AG R ACGVIGL
Sbjct: 103 SLIKLIGPTSVVGRSVVIHAGQDDLGKGDTEESLKTGNAGPRPACGVIGL 152
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 35/76 (46%), Gaps = 11/76 (14%)
Query: 46 IVAVAVLRPYASSPSVTSPSGNVTFIQHDDGTVTVKGF-VTGLKKNTAGSQEHGFHIHEK 104
+ AVAVL+ A SG V F Q + T + + G N E GF IHE
Sbjct: 2 VQAVAVLKGDAGV------SGVVKFEQASESEPTTVSYEIAGNSPNA----ERGFCIHEF 51
Query: 105 GDLREGCASLGGHYNP 120
GD GC S G H+NP
Sbjct: 52 GDATNGCVSAGPHFNP 67
>pdb|2GBU|A Chain A, C6a/c111a/c57a/c146a Apo Cuzn Superoxide Dismutase
pdb|2GBU|B Chain B, C6a/c111a/c57a/c146a Apo Cuzn Superoxide Dismutase
pdb|2GBU|C Chain C, C6a/c111a/c57a/c146a Apo Cuzn Superoxide Dismutase
pdb|2GBU|D Chain D, C6a/c111a/c57a/c146a Apo Cuzn Superoxide Dismutase
pdb|2GBV|A Chain A, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|B Chain B, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|C Chain C, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|D Chain D, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|E Chain E, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|F Chain F, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|G Chain G, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|H Chain H, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|I Chain I, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|J Chain J, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
Length = 153
Score = 127 bits (318), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 67/142 (47%), Positives = 89/142 (62%), Gaps = 6/142 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + HGFH+HE GD G S G H+NP ++
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGDNTAGATSAGPHFNPLSRK 70
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDLGN+ A GVA ED +ISL+G ++I+GR L+VH DD G+G
Sbjct: 71 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHAIIGRTLVVHEKADDLGKGG 130
Query: 253 FNDSTTTGHAGSRVACGVIGLV 274
+ST TG+AGSR+A GVIG+
Sbjct: 131 NEESTKTGNAGSRLAAGVIGIA 152
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 37/74 (50%), Gaps = 12/74 (16%)
Query: 48 AVAVLRPYASSPSVTSPSGNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGD 106
AVAVL+ P G + F Q + +G V V G + GL + HGFH+HE GD
Sbjct: 4 AVAVLK--GDGPV----QGIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEFGD 52
Query: 107 LREGCASLGGHYNP 120
G S G H+NP
Sbjct: 53 NTAGATSAGPHFNP 66
>pdb|2XJL|A Chain A, Monomeric Human Cu,Zn Superoxide Dismutase Without Cu
Ligands
Length = 153
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 88/142 (61%), Gaps = 6/142 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + HGF + E+ D GC S G H+NP ++
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFSVSEEEDNTAGCTSAGPHFNPLSRK 70
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P E RH+GDLGN+ A GVA ED +ISL+G ++I+GR L+V DD G+G
Sbjct: 71 HGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHAIIGRTLVVSEKADDLGKGG 130
Query: 253 FNDSTTTGHAGSRVACGVIGLV 274
+ST TG+AGSR+ACGVIG+
Sbjct: 131 NEESTKTGNAGSRLACGVIGIA 152
Score = 34.3 bits (77), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
Query: 66 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNP 120
G + F Q + +G V V G + GL + HGF + E+ D GC S G H+NP
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFSVSEEEDNTAGCTSAGPHFNP 66
>pdb|3CE1|A Chain A, Crystal Structure Of The CuZN SUPEROXIDE DISMUTASE FROM
Cryptococcus Liquefaciens Strain N6
Length = 168
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 88/141 (62%), Gaps = 5/141 (3%)
Query: 134 GNVTFIQHDDG-TVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G +TF Q G VTV G + KN + + GFH+H+ GD GC S G H+NP
Sbjct: 19 GVITFTQESSGGPVTVSGEI----KNMDANAQRGFHVHQFGDNSNGCTSAGPHFNPTGTN 74
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG EVRH+GDLGN++ SGVA + D +SL GP+SI+GR +++H+ +DD G+
Sbjct: 75 HGDRTAEVRHVGDLGNVKTDASGVAKVQISDSQLSLVGPHSIIGRTIVIHAGEDDLGKTD 134
Query: 253 FNDSTTTGHAGSRVACGVIGL 273
+S TG+AG+R ACGVIG+
Sbjct: 135 HPESLKTGNAGARSACGVIGI 155
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 11/84 (13%)
Query: 42 FAGKIVAVAVLRPYASSPSVTSPSGNVTFIQHDDG-TVTVKGFVTGLKKNTAGSQEHGFH 100
+ I A+AVL+ SP G +TF Q G VTV G + KN + + GFH
Sbjct: 1 MSSTIKAIAVLK--GDSPV----QGVITFTQESSGGPVTVSGEI----KNMDANAQRGFH 50
Query: 101 IHEKGDLREGCASLGGHYNPQQGN 124
+H+ GD GC S G H+NP N
Sbjct: 51 VHQFGDNSNGCTSAGPHFNPTGTN 74
>pdb|3KBE|A Chain A, Metal-Free C. Elegans Cu,Zn Superoxide Dismutase
pdb|3KBF|A Chain A, C. Elegans Cu,Zn Superoxide Dismutase
Length = 157
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 81/129 (62%), Gaps = 12/129 (9%)
Query: 148 VKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQHGAPDHEVRHIGDLG 207
+KG GL HGFH+H+ GD GC S G H+NP K HG P E+RH+GDLG
Sbjct: 34 IKGLTPGL---------HGFHVHQYGDSTNGCISAGPHFNPFGKTHGGPKSEIRHVGDLG 84
Query: 208 NIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM---FNDSTTTGHAGS 264
N+EA GVA + D +++L GP +++GR ++VH+ +DD G G+ +S TG+AG+
Sbjct: 85 NVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVVHAGQDDLGEGVGDKAEESKKTGNAGA 144
Query: 265 RVACGVIGL 273
R ACGVI L
Sbjct: 145 RAACGVIAL 153
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 36/76 (47%), Gaps = 17/76 (22%)
Query: 48 AVAVLRPYASSPSVTSPSGNVTFIQHDDGTVT---VKGFVTGLKKNTAGSQEHGFHIHEK 104
AVAVLR + ++ +T +D V +KG GL HGFH+H+
Sbjct: 4 AVAVLRGETVTGTIW-----ITQKSENDQAVIEGEIKGLTPGL---------HGFHVHQY 49
Query: 105 GDLREGCASLGGHYNP 120
GD GC S G H+NP
Sbjct: 50 GDSTNGCISAGPHFNP 65
>pdb|3HFF|A Chain A, Monomeric Human Cu,Zn Superoxide Dismutase Without Zn
Ligands
Length = 153
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/142 (45%), Positives = 87/142 (61%), Gaps = 6/142 (4%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + HGFH+HE+ D GC S G +NP ++
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEEEDNTAGCTSAGPSFNPLSRK 70
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
G P E R +G LGN+ A GVA ED +ISL+G ++I+GR L+VH DD G+G
Sbjct: 71 SGGPKDEERSVGSLGNVTADKDGVADVSIEDSVISLSGDHAIIGRTLVVHEKADDLGKGG 130
Query: 253 FNDSTTTGHAGSRVACGVIGLV 274
+ST TG+AGSR+ACGVIG+
Sbjct: 131 NEESTKTGNAGSRLACGVIGIA 152
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 66 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNP 120
G + F Q + +G V V G + GL + HGFH+HE+ D GC S G +NP
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHEEEDNTAGCTSAGPSFNP 66
>pdb|1DO5|A Chain A, Human Copper Chaperone For Superoxide Dismutase Domain Ii
pdb|1DO5|B Chain B, Human Copper Chaperone For Superoxide Dismutase Domain Ii
pdb|1DO5|C Chain C, Human Copper Chaperone For Superoxide Dismutase Domain Ii
pdb|1DO5|D Chain D, Human Copper Chaperone For Superoxide Dismutase Domain Ii
Length = 154
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 75/139 (53%), Gaps = 8/139 (5%)
Query: 133 SGNVTFIQHDDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G V F+Q ++G + GL+ HG H+H+ GDL C S G H+NP
Sbjct: 17 QGVVRFLQLTPERCLIEGTIDGLEPGL-----HGLHVHQYGDLTNNCNSCGNHFNPDGAS 71
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
HG P RH GDLGN+ A G A F ED+ + + + ++GR LI+ +DD GRG
Sbjct: 72 HGGPQDSDRHRGDLGNVRADADGRAIFRMEDEQLKV---WDVIGRSLIIDEGEDDLGRGG 128
Query: 253 FNDSTTTGHAGSRVACGVI 271
S TG++G R+ACG+I
Sbjct: 129 HPLSKITGNSGERLACGII 147
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Query: 65 SGNVTFIQHDDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNP 120
G V F+Q ++G + GL+ HG H+H+ GDL C S G H+NP
Sbjct: 17 QGVVRFLQLTPERCLIEGTIDGLEPGL-----HGLHVHQYGDLTNNCNSCGNHFNP 67
>pdb|2JLP|A Chain A, Crystal Structure Of Human Extracellular Copper-Zinc
Superoxide Dismutase.
pdb|2JLP|B Chain B, Crystal Structure Of Human Extracellular Copper-Zinc
Superoxide Dismutase.
pdb|2JLP|C Chain C, Crystal Structure Of Human Extracellular Copper-Zinc
Superoxide Dismutase.
pdb|2JLP|D Chain D, Crystal Structure Of Human Extracellular Copper-Zinc
Superoxide Dismutase
Length = 222
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 66/132 (50%), Gaps = 12/132 (9%)
Query: 143 DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQHGAPDHEVRH 202
D ++GF T S H+H+ GDL +GC S G HYNP H +H
Sbjct: 76 DAFFALEGFPT-----EPNSSSRAIHVHQFGDLSQGCESTGPHYNPLAVPH------PQH 124
Query: 203 IGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGMFNDSTTTGHA 262
GD GN + + SL GP+SI+GR ++VH+ +DD GRG S G+A
Sbjct: 125 PGDFGNFAVRDGSLWRYR-AGLAASLAGPHSIVGRAVVVHAGEDDLGRGGNQASVENGNA 183
Query: 263 GSRVACGVIGLV 274
G R+AC V+G+
Sbjct: 184 GRRLACCVVGVC 195
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 32/70 (45%), Gaps = 13/70 (18%)
Query: 56 ASSPSVTSPSGNVTFIQ-----HDDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREG 110
A+ P VT G V F Q D ++GF T S H+H+ GDL +G
Sbjct: 55 AAQPRVT---GVVLFRQLAPRAKLDAFFALEGFPT-----EPNSSSRAIHVHQFGDLSQG 106
Query: 111 CASLGGHYNP 120
C S G HYNP
Sbjct: 107 CESTGPHYNP 116
>pdb|1XTM|B Chain B, Crystal Structure Of The Double Mutant Y88h-p104h Of A
Sod-like Protein From Bacillus Subtilis.
pdb|1XTM|A Chain A, Crystal Structure Of The Double Mutant Y88h-p104h Of A
Sod-like Protein From Bacillus Subtilis
Length = 175
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 54/112 (48%), Gaps = 12/112 (10%)
Query: 166 GFHIHEKGD-LREGCASLGGHYNPQQKQHGAPDHEVRHIGDLGNIEASPSGVASFEFEDK 224
GFHIHEKG +R S GGH+NP K+HG + H GDL N+E G
Sbjct: 63 GFHIHEKGSCVRPDFESAGGHFNPLNKEHGFNNPMGHHAGDLPNLEVGADGKVDVIMNAP 122
Query: 225 IISLT--GPYSIL---GRGLIVHSDKDDFGRGMFNDSTTTGHAGSRVACGVI 271
SL +IL G I+H DD+ + +G++G+R+ CG +
Sbjct: 123 DTSLKKGSKLNILDEDGSAFIIHEQADDYL------TNPSGNSGARIVCGAL 168
Score = 31.6 bits (70), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Query: 98 GFHIHEKGD-LREGCASLGGHYNP 120
GFHIHEKG +R S GGH+NP
Sbjct: 63 GFHIHEKGSCVRPDFESAGGHFNP 86
>pdb|4BCZ|A Chain A, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form.
pdb|4BCZ|B Chain B, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form
Length = 110
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 63/141 (44%), Gaps = 49/141 (34%)
Query: 134 GNVTFIQHD-DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCASLGGHYNPQQKQ 192
G + F Q + +G V V G + GL + HGFH+H G
Sbjct: 16 GIINFEQKESNGPVKVWGSIKGLTEGL-----HGFHVHGAG------------------- 51
Query: 193 HGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGM 252
GDLGN+ A GVA ED +ISL+G +SI+GR L+VH + G G
Sbjct: 52 -----------GDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVH---EKAGAG- 96
Query: 253 FNDSTTTGHAGSRVACGVIGL 273
AGSR+A GVIG+
Sbjct: 97 ---------AGSRLASGVIGI 108
>pdb|1XTL|B Chain B, Crystal Structure Of P104h Mutant Of Sod-Like Protein From
Bacillus Subtilis.
pdb|1XTL|A Chain A, Crystal Structure Of P104h Mutant Of Sod-Like Protein From
Bacillus Subtilis.
pdb|1XTL|C Chain C, Crystal Structure Of P104h Mutant Of Sod-Like Protein From
Bacillus Subtilis.
pdb|1XTL|D Chain D, Crystal Structure Of P104h Mutant Of Sod-Like Protein From
Bacillus Subtilis
Length = 175
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 54/112 (48%), Gaps = 12/112 (10%)
Query: 166 GFHIHEKGD-LREGCASLGGHYNPQQKQHGAPDHEVRHIGDLGNIEASPSGVASFEFEDK 224
GFHI+EKG +R S GGH+NP K+HG + H GDL N+E G
Sbjct: 63 GFHIYEKGSCVRPDFESAGGHFNPLNKEHGFNNPMGHHAGDLPNLEVGADGKVDVIMNAP 122
Query: 225 IISLT--GPYSIL---GRGLIVHSDKDDFGRGMFNDSTTTGHAGSRVACGVI 271
SL +IL G I+H DD+ + +G++G+R+ CG +
Sbjct: 123 DTSLKKGSKLNILDEDGSAFIIHEQADDYL------TNPSGNSGARIVCGAL 168
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Query: 98 GFHIHEKGD-LREGCASLGGHYNP 120
GFHI+EKG +R S GGH+NP
Sbjct: 63 GFHIYEKGSCVRPDFESAGGHFNP 86
>pdb|4BD4|A Chain A, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|B Chain B, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|C Chain C, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|D Chain D, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|E Chain E, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|F Chain F, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|G Chain G, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|H Chain H, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|I Chain I, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
Length = 110
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 42/70 (60%), Gaps = 13/70 (18%)
Query: 204 GDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGMFNDSTTTGHAG 263
GDLGN+ A GVA ED +ISL+G +SI+GR L+VH + G G AG
Sbjct: 52 GDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVH---EKAGAG----------AG 98
Query: 264 SRVACGVIGL 273
SR+A GVIG+
Sbjct: 99 SRLASGVIGI 108
>pdb|1OAJ|A Chain A, Active Site Copper And Zinc Ions Modulate The Quaternary
Structure Of Prokaryotic Cu,Zn Superoxide Dismutase
Length = 151
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 22/150 (14%)
Query: 131 SPSGNVTFIQHDDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDL----REGCASL---- 182
P G + Q+D G V F+ L T G HGFHIH+ G ++G L
Sbjct: 14 KPVGTIELSQNDYGVV----FIPELADLTPGM--HGFHIHQNGSCASSEKDGKVVLGGAA 67
Query: 183 GGHYNPQQ-KQHGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIV 241
GGHY+P+ +HG P + H GDL + S +G+A+ ++L + G +++
Sbjct: 68 GGHYDPEHTNKHGFPWTDDNHKGDLPALFVSANGLATNPVLAPRLTLK---ELKGHAIMI 124
Query: 242 HSDKDDFGRGMFNDSTTTGHAGSRVACGVI 271
H+ D+ + G G+RVACGVI
Sbjct: 125 HAGGDNHS----DMPKALGGGGARVACGVI 150
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 14/71 (19%)
Query: 63 SPSGNVTFIQHDDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDL----REGCASL---- 114
P G + Q+D G V F+ L T G HGFHIH+ G ++G L
Sbjct: 14 KPVGTIELSQNDYGVV----FIPELADLTPGM--HGFHIHQNGSCASSEKDGKVVLGGAA 67
Query: 115 GGHYNPQQGNS 125
GGHY+P+ N
Sbjct: 68 GGHYDPEHTNK 78
>pdb|1OAL|A Chain A, Active Site Copper And Zinc Ions Modulate The Quaternary
Structure Of Prokaryotic Cu,Zn Superoxide Dismutase
Length = 151
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 22/150 (14%)
Query: 131 SPSGNVTFIQHDDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDL----REGCASL---- 182
P G + Q+ G V F+ L T G EHGFHIH+ G ++G L
Sbjct: 14 KPVGTIELSQNKYGVV----FIPELADLTPG--EHGFHIHQNGSCASSEKDGKVVLGGAA 67
Query: 183 GGHYNPQQ-KQHGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIV 241
GGHY+P+ +HG P + H GDL + S +G+A+ ++L + G +++
Sbjct: 68 GGHYDPEHTNKHGFPWTDDNHKGDLPALFVSANGLATNPVLAPRLTLK---ELKGHAIMI 124
Query: 242 HSDKDDFGRGMFNDSTTTGHAGSRVACGVI 271
H+ D+ + G G+RVACGVI
Sbjct: 125 HAGGDNHS----DMPKALGGGGARVACGVI 150
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 14/71 (19%)
Query: 63 SPSGNVTFIQHDDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDL----REGCASL---- 114
P G + Q+ G V F+ L T G EHGFHIH+ G ++G L
Sbjct: 14 KPVGTIELSQNKYGVV----FIPELADLTPG--EHGFHIHQNGSCASSEKDGKVVLGGAA 67
Query: 115 GGHYNPQQGNS 125
GGHY+P+ N
Sbjct: 68 GGHYDPEHTNK 78
>pdb|1S4I|B Chain B, Crystal Structure Of A Sod-like Protein From Bacillus
Subtilis
pdb|1S4I|A Chain A, Crystal Structure Of A Sod-like Protein From Bacillus
Subtilis
pdb|1S4I|C Chain C, Crystal Structure Of A Sod-like Protein From Bacillus
Subtilis
pdb|1S4I|D Chain D, Crystal Structure Of A Sod-like Protein From Bacillus
Subtilis
Length = 175
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 12/112 (10%)
Query: 166 GFHIHEKGD-LREGCASLGGHYNPQQKQHGAPDHEVRHIGDLGNIEASPSGVASFEFEDK 224
GFHI+EKG +R S GG +NP K+HG + H GDL N+E G
Sbjct: 63 GFHIYEKGSCVRPDFESAGGPFNPLNKEHGFNNPMGHHAGDLPNLEVGADGKVDVIMNAP 122
Query: 225 IISLT--GPYSIL---GRGLIVHSDKDDFGRGMFNDSTTTGHAGSRVACGVI 271
SL +IL G I+H DD+ + +G++G+R+ CG +
Sbjct: 123 DTSLKKGSKLNILDEDGSAFIIHEQADDYL------TNPSGNSGARIVCGAL 168
>pdb|1U3N|A Chain A, A Sod-Like Protein From B. Subtilis, Unstructured In
Solution, Becomes Ordered In The Crystal: Implications
For Function And For Fibrillogenesis
Length = 162
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 12/112 (10%)
Query: 166 GFHIHEKGD-LREGCASLGGHYNPQQKQHGAPDHEVRHIGDLGNIEASPSGVASFEFEDK 224
GFHI+EKG +R S GG +NP K+HG + H GDL N+E G
Sbjct: 50 GFHIYEKGSCVRPDFESAGGPFNPLNKEHGFNNPMGHHAGDLPNLEVGADGKVDVIMNAP 109
Query: 225 IISLT--GPYSIL---GRGLIVHSDKDDFGRGMFNDSTTTGHAGSRVACGVI 271
SL +IL G I+H DD+ + +G++G+R+ CG +
Sbjct: 110 DTSLKKGSKLNILDEDGSAFIIHEQADDYL------TNPSGNSGARIVCGAL 155
>pdb|1IB5|A Chain A, X-Ray 3d Structure Of P.Leiognathi Cu,Zn Sod Mutant W83y
Length = 151
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 131 SPSGNVTFIQHDDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDL----REGCASLGG-- 184
P G + Q+ G V F+ L T G HGFHIH+ G ++G LGG
Sbjct: 14 KPVGTIELSQNKYGVV----FIPELADLTPGM--HGFHIHQNGSCASSEKDGKVVLGGAA 67
Query: 185 --HYNPQQ-KQHGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIV 241
HY+P+ +HG P + H GDL + S +G+A+ ++L + G +++
Sbjct: 68 GGHYDPEHTNKHGFPYTDDNHKGDLPALFVSANGLATNPVLAPRLTLK---ELKGHAIMI 124
Query: 242 HSDKDDFGRGMFNDSTTTGHAGSRVACGVI 271
H+ D+ + G G+RVACGVI
Sbjct: 125 HAGGDNHS----DMPKALGGGGARVACGVI 150
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 14/71 (19%)
Query: 63 SPSGNVTFIQHDDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDL----REGCASL---- 114
P G + Q+ G V F+ L T G HGFHIH+ G ++G L
Sbjct: 14 KPVGTIELSQNKYGVV----FIPELADLTPGM--HGFHIHQNGSCASSEKDGKVVLGGAA 67
Query: 115 GGHYNPQQGNS 125
GGHY+P+ N
Sbjct: 68 GGHYDPEHTNK 78
>pdb|1IBF|A Chain A, X-Ray 3d Structure Of P.Leiognathi Cu,Zn Sod Mutant V29g
Length = 151
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 131 SPSGNVTFIQHDDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDL----REGCASL---- 182
P G + Q+ G GF+ L T G HGFHIH+ G ++G L
Sbjct: 14 KPVGTIELSQNKYGV----GFIPELADLTPGM--HGFHIHQNGSCASSEKDGKVVLGGAA 67
Query: 183 GGHYNPQQ-KQHGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIV 241
GGHY+P+ +HG P + H GDL + S +G+A+ ++L + G +++
Sbjct: 68 GGHYDPEHTNKHGFPWTDDNHKGDLPALFVSANGLATNPVLAPRLTLK---ELKGHAIMI 124
Query: 242 HSDKDDFGRGMFNDSTTTGHAGSRVACGVI 271
H+ D+ + G G+RVACGVI
Sbjct: 125 HAGGDNHS----DMPKALGGGGARVACGVI 150
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 14/71 (19%)
Query: 63 SPSGNVTFIQHDDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDL----REGCASL---- 114
P G + Q+ G GF+ L T G HGFHIH+ G ++G L
Sbjct: 14 KPVGTIELSQNKYGV----GFIPELADLTPGM--HGFHIHQNGSCASSEKDGKVVLGGAA 67
Query: 115 GGHYNPQQGNS 125
GGHY+P+ N
Sbjct: 68 GGHYDPEHTNK 78
>pdb|1BZO|A Chain A, Three-Dimensional Structure Of Prokaryotic Cu,Zn
Superoxide Dismutase From P.Leiognathi, Solved By X-Ray
Crystallography
Length = 151
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 131 SPSGNVTFIQHDDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDL----REGCASL---- 182
P G + Q+ G V F+ L T G HGFHIH+ G ++G L
Sbjct: 14 KPVGTIELSQNKYGVV----FIPELADLTPGM--HGFHIHQNGSCASSEKDGKVVLGGAA 67
Query: 183 GGHYNPQQ-KQHGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIV 241
GGHY+P+ +HG P + H GDL + S +G+A+ ++L + G +++
Sbjct: 68 GGHYDPEHTNKHGFPWTDDNHKGDLPALFVSANGLATNPVLAPRLTLK---ELKGHAIMI 124
Query: 242 HSDKDDFGRGMFNDSTTTGHAGSRVACGVI 271
H+ D+ + G G+RVACGVI
Sbjct: 125 HAGGDNHS----DMPKALGGGGARVACGVI 150
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 14/71 (19%)
Query: 63 SPSGNVTFIQHDDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDL----REGCASL---- 114
P G + Q+ G V F+ L T G HGFHIH+ G ++G L
Sbjct: 14 KPVGTIELSQNKYGVV----FIPELADLTPGM--HGFHIHQNGSCASSEKDGKVVLGGAA 67
Query: 115 GGHYNPQQGNS 125
GGHY+P+ N
Sbjct: 68 GGHYDPEHTNK 78
>pdb|1IBB|A Chain A, X-Ray 3d Structure Of P.Leiognathi Cu,Zn Sod Mutant W83f
Length = 151
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 131 SPSGNVTFIQHDDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDL----REGCASLGG-- 184
P G + Q+ G V F+ L T G HGFHIH+ G ++G LGG
Sbjct: 14 KPVGTIELSQNKYGVV----FIPELADLTPGM--HGFHIHQNGSCASSEKDGKVVLGGAA 67
Query: 185 --HYNPQQ-KQHGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIV 241
HY+P+ +HG P + H GDL + S +G+A+ ++L + G +++
Sbjct: 68 GGHYDPEHTNKHGFPFTDDNHKGDLPALFVSANGLATNPVLAPRLTLK---ELKGHAIMI 124
Query: 242 HSDKDDFGRGMFNDSTTTGHAGSRVACGVI 271
H+ D+ + G G+RVACGVI
Sbjct: 125 HAGGDNHS----DMPKALGGGGARVACGVI 150
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 14/71 (19%)
Query: 63 SPSGNVTFIQHDDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDL----REGCASL---- 114
P G + Q+ G V F+ L T G HGFHIH+ G ++G L
Sbjct: 14 KPVGTIELSQNKYGVV----FIPELADLTPGM--HGFHIHQNGSCASSEKDGKVVLGGAA 67
Query: 115 GGHYNPQQGNS 125
GGHY+P+ N
Sbjct: 68 GGHYDPEHTNK 78
>pdb|1IBH|A Chain A, X-Ray 3d Structure Of P.Leiognathi Cu,Zn Sod Mutant M41i
Length = 151
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 131 SPSGNVTFIQHDDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDL----REGCASL---- 182
P G + Q+ G V F+ L T G HGFHIH+ G ++G L
Sbjct: 14 KPVGTIELSQNKYGVV----FIPELADLTPGI--HGFHIHQNGSCASSEKDGKVVLGGAA 67
Query: 183 GGHYNPQQ-KQHGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIV 241
GGHY+P+ +HG P + H GDL + S +G+A+ ++L + G +++
Sbjct: 68 GGHYDPEHTNKHGFPWTDDNHKGDLPALFVSANGLATNPVLAPRLTLK---ELKGHAIMI 124
Query: 242 HSDKDDFGRGMFNDSTTTGHAGSRVACGVI 271
H+ D+ + G G+RVACGVI
Sbjct: 125 HAGGDNHS----DMPKALGGGGARVACGVI 150
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 14/71 (19%)
Query: 63 SPSGNVTFIQHDDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDL----REGCASL---- 114
P G + Q+ G V F+ L T G HGFHIH+ G ++G L
Sbjct: 14 KPVGTIELSQNKYGVV----FIPELADLTPGI--HGFHIHQNGSCASSEKDGKVVLGGAA 67
Query: 115 GGHYNPQQGNS 125
GGHY+P+ N
Sbjct: 68 GGHYDPEHTNK 78
>pdb|1YAI|A Chain A, X-Ray Structure Of A Bacterial Copper,Zinc Superoxide
Dismutase
pdb|1YAI|B Chain B, X-Ray Structure Of A Bacterial Copper,Zinc Superoxide
Dismutase
pdb|1YAI|C Chain C, X-Ray Structure Of A Bacterial Copper,Zinc Superoxide
Dismutase
Length = 151
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 69/150 (46%), Gaps = 22/150 (14%)
Query: 131 SPSGNVTFIQHDDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDL----REGCASL---- 182
P G + Q+ G V F L T G HGFHIH+ G ++G L
Sbjct: 14 KPVGTIELSQNKYGVV----FTPELADLTPGM--HGFHIHQNGSCASSEKDGKVVLGGAA 67
Query: 183 GGHYNPQQ-KQHGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIV 241
GGHY+P+ +HG P + H GDL + S +G+A+ ++L + G +++
Sbjct: 68 GGHYDPEHTNKHGFPWTDDNHKGDLPALFVSANGLATNPVLAPRLTLK---ELKGHAIMI 124
Query: 242 HSDKDDFGRGMFNDSTTTGHAGSRVACGVI 271
H+ D+ + G G+RVACGVI
Sbjct: 125 HAGGDNHS----DMPKALGGGGARVACGVI 150
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 14/71 (19%)
Query: 63 SPSGNVTFIQHDDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDL----REGCASL---- 114
P G + Q+ G V F L T G HGFHIH+ G ++G L
Sbjct: 14 KPVGTIELSQNKYGVV----FTPELADLTPGM--HGFHIHQNGSCASSEKDGKVVLGGAA 67
Query: 115 GGHYNPQQGNS 125
GGHY+P+ N
Sbjct: 68 GGHYDPEHTNK 78
>pdb|1IBD|A Chain A, X-Ray 3d Structure Of P.Leiognathi Cu,Zn Sod Mutant V29a
Length = 151
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 22/150 (14%)
Query: 131 SPSGNVTFIQHDDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDL----REGCASL---- 182
P G + Q+ G F+ L T G HGFHIH+ G ++G L
Sbjct: 14 KPVGTIELSQNKYGVA----FIPELADLTPGM--HGFHIHQNGSCASSEKDGKVVLGGAA 67
Query: 183 GGHYNPQQ-KQHGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIISLTGPYSILGRGLIV 241
GGHY+P+ +HG P + H GDL + S +G+A+ ++L + G +++
Sbjct: 68 GGHYDPEHTNKHGFPWTDDNHKGDLPALFVSANGLATNPVLAPRLTLK---ELKGHAIMI 124
Query: 242 HSDKDDFGRGMFNDSTTTGHAGSRVACGVI 271
H+ D+ + G G+RVACGVI
Sbjct: 125 HAGGDNHS----DMPKALGGGGARVACGVI 150
Score = 28.5 bits (62), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 14/71 (19%)
Query: 63 SPSGNVTFIQHDDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDL----REGCASL---- 114
P G + Q+ G F+ L T G HGFHIH+ G ++G L
Sbjct: 14 KPVGTIELSQNKYGVA----FIPELADLTPGM--HGFHIHQNGSCASSEKDGKVVLGGAA 67
Query: 115 GGHYNPQQGNS 125
GGHY+P+ N
Sbjct: 68 GGHYDPEHTNK 78
>pdb|1Z9P|A Chain A, X-Ray Structure Of A Cu-Zn Superoxide Dismutase From
Haemophilus Ducreyi
pdb|1Z9P|B Chain B, X-Ray Structure Of A Cu-Zn Superoxide Dismutase From
Haemophilus Ducreyi
Length = 155
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 62/138 (44%), Gaps = 19/138 (13%)
Query: 145 TVTVKGFVTGLKKNTAGSQEHGFHIHEK---------GDLREGCASLGGHYNPQQKQ-HG 194
T + G V K + HGFHIHEK G L G + GGH++P+Q Q HG
Sbjct: 25 TESAYGLVFTPKLHDLAHGLHGFHIHEKPSCEPKEKDGKLVAGLGA-GGHWDPKQTQKHG 83
Query: 195 APDHEVRHIGDLGNIEASPSGVASFE-FEDKIISLTGPYSILGRGLIVHSDKDDFGRGMF 253
P + H+GDL + G A+ ++ L + G L++H+ D+
Sbjct: 84 YPWSDDAHMGDLPALFVMHDGSATTPVLAPRLKKLA---EVKGHSLMIHAGGDNHS---- 136
Query: 254 NDSTTTGHAGSRVACGVI 271
+ G G R+ACGVI
Sbjct: 137 DHPAPLGGGGPRMACGVI 154
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 46/112 (41%), Gaps = 17/112 (15%)
Query: 77 TVTVKGFVTGLKKNTAGSQEHGFHIHEK---------GDLREGCASLGGHYNPQQGNSSP 127
T + G V K + HGFHIHEK G L G + GGH++P+Q
Sbjct: 25 TESAYGLVFTPKLHDLAHGLHGFHIHEKPSCEPKEKDGKLVAGLGA-GGHWDPKQTQKHG 83
Query: 128 SVTSPSGNV-----TFIQHDDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGD 174
S ++ F+ H DG+ T LKK A + H IH GD
Sbjct: 84 YPWSDDAHMGDLPALFVMH-DGSATTPVLAPRLKK-LAEVKGHSLMIHAGGD 133
>pdb|2AQS|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
K91E, K94e Double Mutant
pdb|2AQS|B Chain B, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
K91E, K94e Double Mutant
Length = 164
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 68/145 (46%), Gaps = 23/145 (15%)
Query: 142 DDGTVTVKGFVTGL--KKNTAGSQE--HGFHIHE---------KGDLREGCASLGGHYNP 188
D GTVT+ GL + G E HGFHIHE +G+L G + GGH++P
Sbjct: 27 DVGTVTITESNYGLVFTPDLQGLSEGLHGFHIHENPSCEPKEEEGELTAGLGA-GGHWDP 85
Query: 189 Q-QKQHGAPDHEVRHIGDLGNIEASPSGVASFE-FEDKIISLTGPYSILGRGLIVHSDKD 246
+ KQHG P + H+GDL + G A+ ++ L + G +++H+ D
Sbjct: 86 KGAKQHGYPWQDDAHLGDLPALTVLHDGTATNPVLAPRLKHLD---DVRGHSIMIHTGGD 142
Query: 247 DFGRGMFNDSTTTGHAGSRVACGVI 271
+ + G G R+ACGVI
Sbjct: 143 NHS----DHPAPLGGGGPRMACGVI 163
>pdb|1ESO|A Chain A, Monomeric Cu,Zn Superoxide Dismutase From Escherichia Coli
Length = 154
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 68/149 (45%), Gaps = 26/149 (17%)
Query: 134 GNVTFIQHDDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDL----REGCASL----GGH 185
G+VT + D G F LK G EHGFHIH KG ++G AS GGH
Sbjct: 20 GSVTITETDKGLE----FSPDLKALPPG--EHGFHIHAKGSCQPATKDGKASAAESAGGH 73
Query: 186 YNPQQK-QHGAPDHEVRHIGDLGNIEASPSGVASFEFEDKIIS--LTGPYSILGRGLIVH 242
+PQ +H P+ H+GDL + + G A+ D +I+ L I + L+VH
Sbjct: 74 LDPQNTGKHEGPEG-AGHLGDLPALVVNNDGKAT----DAVIAPRLKSLDEIKDKALMVH 128
Query: 243 SDKDDFGRGMFNDSTTTGHAGSRVACGVI 271
D+ M + G G R ACGVI
Sbjct: 129 VGGDN----MSDQPKPLGGGGERYACGVI 153
Score = 31.2 bits (69), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 31/64 (48%), Gaps = 14/64 (21%)
Query: 66 GNVTFIQHDDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDL----REGCA----SLGGH 117
G+VT + D G F LK G EHGFHIH KG ++G A S GGH
Sbjct: 20 GSVTITETDKGLE----FSPDLKALPPG--EHGFHIHAKGSCQPATKDGKASAAESAGGH 73
Query: 118 YNPQ 121
+PQ
Sbjct: 74 LDPQ 77
>pdb|1Z9N|A Chain A, X-Ray Structure Of A Cu-Zn Superoxide Dismutase From
Haemophilus Ducreyi With Haem Bound At The Dimer
Interface
pdb|1Z9N|B Chain B, X-Ray Structure Of A Cu-Zn Superoxide Dismutase From
Haemophilus Ducreyi With Haem Bound At The Dimer
Interface
pdb|1Z9N|C Chain C, X-Ray Structure Of A Cu-Zn Superoxide Dismutase From
Haemophilus Ducreyi With Haem Bound At The Dimer
Interface
pdb|1Z9N|D Chain D, X-Ray Structure Of A Cu-Zn Superoxide Dismutase From
Haemophilus Ducreyi With Haem Bound At The Dimer
Interface
Length = 177
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 62/138 (44%), Gaps = 19/138 (13%)
Query: 145 TVTVKGFVTGLKKNTAGSQEHGFHIHEK---------GDLREGCASLGGHYNPQQKQ-HG 194
T + G V K + HGFHIHEK G L G + GGH++P+Q Q HG
Sbjct: 47 TESAYGLVFTPKLHDLAHGLHGFHIHEKPSCEPKEKDGKLVAGLGA-GGHWDPKQTQKHG 105
Query: 195 APDHEVRHIGDLGNIEASPSGVASFE-FEDKIISLTGPYSILGRGLIVHSDKDDFGRGMF 253
P + H+GDL + G A+ ++ L + G L++H+ D+
Sbjct: 106 YPWSDDAHMGDLPALFVMHDGSATTPVLAPRLKKLA---EVKGHSLMIHAGGDNHS---- 158
Query: 254 NDSTTTGHAGSRVACGVI 271
+ G G R+ACGVI
Sbjct: 159 DHPAPLGGGGPRMACGVI 176
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 51/123 (41%), Gaps = 18/123 (14%)
Query: 77 TVTVKGFVTGLKKNTAGSQEHGFHIHEK---------GDLREGCASLGGHYNPQQGNSSP 127
T + G V K + HGFHIHEK G L G + GGH++P+Q
Sbjct: 47 TESAYGLVFTPKLHDLAHGLHGFHIHEKPSCEPKEKDGKLVAGLGA-GGHWDPKQTQKHG 105
Query: 128 SVTSPSGNV-----TFIQHDDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLR-EGCAS 181
S ++ F+ H DG+ T LKK A + H IH GD + A
Sbjct: 106 YPWSDDAHMGDLPALFVMH-DGSATTPVLAPRLKK-LAEVKGHSLMIHAGGDNHSDHPAP 163
Query: 182 LGG 184
LGG
Sbjct: 164 LGG 166
>pdb|2AQP|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS E73A
MUTANT
pdb|2AQP|B Chain B, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS E73A
MUTANT
Length = 164
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 69/149 (46%), Gaps = 25/149 (16%)
Query: 134 GNVTFIQHDDGTVTVKGFVTGLKKNTAGSQEHGFHIHE---------KGDLREGCASLGG 184
G VT + + G V F L+ +AG HGFHIHE +G L G + GG
Sbjct: 29 GTVTITESNYGLV----FTPDLQGLSAGL--HGFHIHENPSCEPKEKEGKLTAGLGA-GG 81
Query: 185 HYNPQ-QKQHGAPDHEVRHIGDLGNIEASPSGVASFE-FEDKIISLTGPYSILGRGLIVH 242
H++P+ KQHG P + H+GDL + G A+ ++ L + G +++H
Sbjct: 82 HWDPKGAKQHGYPWQDDAHLGDLPALTVLHDGTATNPVLAPRLKHLD---DVRGHSIMIH 138
Query: 243 SDKDDFGRGMFNDSTTTGHAGSRVACGVI 271
+ D+ + G G R+ACGVI
Sbjct: 139 TGGDNHS----DHPAPLGGGGPRMACGVI 163
>pdb|2AQT|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
K91Q, K94q Double Mutant
pdb|2AQT|B Chain B, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
K91Q, K94q Double Mutant
pdb|2AQT|C Chain C, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
K91Q, K94q Double Mutant
Length = 164
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 67/145 (46%), Gaps = 23/145 (15%)
Query: 142 DDGTVTVKGFVTGL--KKNTAGSQE--HGFHIHE---------KGDLREGCASLGGHYNP 188
D GTVT+ GL + G E HGFHIHE +G L G + GGH++P
Sbjct: 27 DVGTVTITESNYGLVFTPDLQGLSEGLHGFHIHENPSCEPKEQEGQLTAGLGA-GGHWDP 85
Query: 189 Q-QKQHGAPDHEVRHIGDLGNIEASPSGVASFE-FEDKIISLTGPYSILGRGLIVHSDKD 246
+ KQHG P + H+GDL + G A+ ++ L + G +++H+ D
Sbjct: 86 KGAKQHGYPWQDDAHLGDLPALTVLHDGTATNPVLAPRLKHLD---DVRGHSIMIHTGGD 142
Query: 247 DFGRGMFNDSTTTGHAGSRVACGVI 271
+ + G G R+ACGVI
Sbjct: 143 NHS----DHPAPLGGGGPRMACGVI 163
>pdb|2AQR|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS K91Q
Mutant
pdb|2AQR|B Chain B, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS K91Q
Mutant
pdb|2AQR|C Chain C, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS K91Q
Mutant
Length = 164
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 67/145 (46%), Gaps = 23/145 (15%)
Query: 142 DDGTVTVKGFVTGL--KKNTAGSQE--HGFHIHE---------KGDLREGCASLGGHYNP 188
D GTVT+ GL + G E HGFHIHE +G L G + GGH++P
Sbjct: 27 DVGTVTITESNYGLVFTPDLQGLSEGLHGFHIHENPSCEPKEQEGKLTAGLGA-GGHWDP 85
Query: 189 Q-QKQHGAPDHEVRHIGDLGNIEASPSGVASFE-FEDKIISLTGPYSILGRGLIVHSDKD 246
+ KQHG P + H+GDL + G A+ ++ L + G +++H+ D
Sbjct: 86 KGAKQHGYPWQDDAHLGDLPALTVLHDGTATNPVLAPRLKHLD---DVRGHSIMIHTGGD 142
Query: 247 DFGRGMFNDSTTTGHAGSRVACGVI 271
+ + G G R+ACGVI
Sbjct: 143 NHS----DHPAPLGGGGPRMACGVI 163
>pdb|2AQN|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
pdb|2AQN|B Chain B, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
pdb|2AQN|C Chain C, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
Length = 164
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 67/145 (46%), Gaps = 23/145 (15%)
Query: 142 DDGTVTVKGFVTGL--KKNTAGSQE--HGFHIHE---------KGDLREGCASLGGHYNP 188
D GTVT+ GL + G E HGFHIHE +G L G + GGH++P
Sbjct: 27 DVGTVTITESNYGLVFTPDLQGLSEGLHGFHIHENPSCEPKEKEGKLTAGLGA-GGHWDP 85
Query: 189 Q-QKQHGAPDHEVRHIGDLGNIEASPSGVASFE-FEDKIISLTGPYSILGRGLIVHSDKD 246
+ KQHG P + H+GDL + G A+ ++ L + G +++H+ D
Sbjct: 86 KGAKQHGYPWQDDAHLGDLPALTVLHDGTATNPVLAPRLKHLD---DVRGHSIMIHTGGD 142
Query: 247 DFGRGMFNDSTTTGHAGSRVACGVI 271
+ + G G R+ACGVI
Sbjct: 143 NHS----DHPAPLGGGGPRMACGVI 163
>pdb|2AQQ|A Chain A, CuZN SUPEROXID DISMUTATE FROM NEISSERIA MENINGITIDIS K91E
MUTANT
pdb|2AQQ|B Chain B, CuZN SUPEROXID DISMUTATE FROM NEISSERIA MENINGITIDIS K91E
MUTANT
pdb|2AQQ|C Chain C, CuZN SUPEROXID DISMUTATE FROM NEISSERIA MENINGITIDIS K91E
MUTANT
Length = 164
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 67/145 (46%), Gaps = 23/145 (15%)
Query: 142 DDGTVTVKGFVTGL--KKNTAGSQE--HGFHIHE---------KGDLREGCASLGGHYNP 188
D GTVT+ GL + G E HGFHIHE +G L G + GGH++P
Sbjct: 27 DVGTVTITESNYGLVFTPDLQGLSEGLHGFHIHENPSCEPKEEEGKLTAGLGA-GGHWDP 85
Query: 189 Q-QKQHGAPDHEVRHIGDLGNIEASPSGVASFE-FEDKIISLTGPYSILGRGLIVHSDKD 246
+ KQHG P + H+GDL + G A+ ++ L + G +++H+ D
Sbjct: 86 KGAKQHGYPWQDDAHLGDLPALTVLHDGTATNPVLAPRLKHLD---DVRGHSIMIHTGGD 142
Query: 247 DFGRGMFNDSTTTGHAGSRVACGVI 271
+ + G G R+ACGVI
Sbjct: 143 NHS----DHPAPLGGGGPRMACGVI 163
>pdb|2WWN|A Chain A, Yersinia Pseudotuberculosis Superoxide Dismutase C With
Bound Azide
pdb|2WWN|B Chain B, Yersinia Pseudotuberculosis Superoxide Dismutase C With
Bound Azide
pdb|2WWO|A Chain A, Yersinia Pseudotuberculosis Superoxide Dismutase C
pdb|2WWO|B Chain B, Yersinia Pseudotuberculosis Superoxide Dismutase C
Length = 169
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 17/117 (14%)
Query: 165 HGFHIHEKGD----LREGCA----SLGGHYNPQQK-QHGAPDHEVRHIGDLGNIEASPSG 215
HGFH+HEK +++G A + GGH +P + H P ++ H+GDL + + G
Sbjct: 59 HGFHLHEKPSCAPGMKDGKAVPALAAGGHLDPNKTGVHLGPYNDKGHLGDLPGLVVNADG 118
Query: 216 VASFE-FEDKIISLTGPYSILGRGLIVHSDKDDFGRGMFNDSTTTGHAGSRVACGVI 271
A++ ++ SL+ + L++H+ D++ + G G+R+ACGVI
Sbjct: 119 TATYPVLAPRLKSLS---EVKQHALMIHAGGDNYS----DHPMPLGGGGARMACGVI 168
Score = 28.1 bits (61), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 13/90 (14%)
Query: 97 HGFHIHEKGD----LREGCA----SLGGHYNPQQGNSSPSVTSPSGNV----TFIQHDDG 144
HGFH+HEK +++G A + GGH +P + + G++ + + DG
Sbjct: 59 HGFHLHEKPSCAPGMKDGKAVPALAAGGHLDPNKTGVHLGPYNDKGHLGDLPGLVVNADG 118
Query: 145 TVTVKGFVTGLKKNTAGSQEHGFHIHEKGD 174
T T L K+ + ++H IH GD
Sbjct: 119 TATYPVLAPRL-KSLSEVKQHALMIHAGGD 147
>pdb|1EQW|A Chain A, Crystal Structure Of Salmonella Typhimurium Cu,Zn
Superoxide Dismutase
pdb|1EQW|B Chain B, Crystal Structure Of Salmonella Typhimurium Cu,Zn
Superoxide Dismutase
pdb|1EQW|C Chain C, Crystal Structure Of Salmonella Typhimurium Cu,Zn
Superoxide Dismutase
pdb|1EQW|D Chain D, Crystal Structure Of Salmonella Typhimurium Cu,Zn
Superoxide Dismutase
Length = 156
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 17/117 (14%)
Query: 165 HGFHIHEKGDLREGCAS--------LGGHYNPQQK-QHGAPDHEVRHIGDLGNIEASPSG 215
HGFH+H G GGH +P++ +H P ++ H+GDL + + G
Sbjct: 45 HGFHVHTNPSCMPGMKDGKEVPALMAGGHLDPEKTGKHLGPYNDKGHLGDLPGLVVNADG 104
Query: 216 VASFEF-EDKIISLTGPYSILGRGLIVHSDKDDFGRGMFNDSTTTGHAGSRVACGVI 271
A++ ++ SL+ + G L++H D++ + G G+R ACGVI
Sbjct: 105 TATYPLLAPRLKSLS---ELKGHSLMIHKGGDNYS----DKPAPLGGGGARFACGVI 154
>pdb|2APS|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM ACTINOBACILLUS
Pleuropneumoniae
pdb|2APS|B Chain B, CuZN SUPEROXIDE DISMUTASE FROM ACTINOBACILLUS
Pleuropneumoniae
Length = 162
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 19/118 (16%)
Query: 165 HGFHIHEK---------GDLREGCASLGGHYNPQQ-KQHGAPDHEVRHIGDLGNIEASPS 214
HGFHIH+ G L G + GGH++P++ KQHG P + H+GDL +
Sbjct: 52 HGFHIHQNPSCEPKEKDGKLVAGLGA-GGHWDPKETKQHGYPWSDNAHLGDLPALFVEHD 110
Query: 215 GVASFE-FEDKIISLTGPYSILGRGLIVHSDKDDFGRGMFNDSTTTGHAGSRVACGVI 271
G A+ ++ L + G L++H D+ + G G R+ACGVI
Sbjct: 111 GSATNPVLAPRLKKLD---EVKGHSLMIHEGGDNHS----DHPAPLGGGGPRMACGVI 161
Score = 28.5 bits (62), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 17/92 (18%)
Query: 97 HGFHIHEK---------GDLREGCASLGGHYNPQQGNSSPSVTSPSGNV-----TFIQHD 142
HGFHIH+ G L G + GGH++P++ S + ++ F++H
Sbjct: 52 HGFHIHQNPSCEPKEKDGKLVAGLGA-GGHWDPKETKQHGYPWSDNAHLGDLPALFVEH- 109
Query: 143 DGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGD 174
DG+ T LKK + H IHE GD
Sbjct: 110 DGSATNPVLAPRLKKLDE-VKGHSLMIHEGGD 140
>pdb|2AQM|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM BRUCELLA ABORTUS
Length = 154
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 56/131 (42%), Gaps = 20/131 (15%)
Query: 151 FVTGLKKNTAGSQEHGFHIHEKGDLREG--------CASLGGHYNPQQKQHGAPDHEVRH 202
F ++K T G HGFH+HE G + GGHY+P H H
Sbjct: 33 FKVNMEKLTPGY--HGFHVHENPSCAPGEKDGKIVPALAAGGHYDPGNTHHHLGPEGDGH 90
Query: 203 IGDLGNIEASPSGVASFEFEDKIIS--LTGPYSILGRGLIVHSDKDDFGRGMFNDSTTTG 260
+GDL + A+ G S + +++ L I R L+VH D++ + G
Sbjct: 91 MGDLPRLSANADGKVS----ETVVAPHLKKLAEIKQRSLMVHVGGDNYS----DKPEPLG 142
Query: 261 HAGSRVACGVI 271
G+R ACGVI
Sbjct: 143 GGGARFACGVI 153
>pdb|2K4W|A Chain A, The Solution Structure Of The Monomeric Copper, Zinc
Superox Dismutase From Salmonella Enterica
Length = 154
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 164 EHGFHIHEKGD----LREGCA----SLGGHYNPQQK-QHGAPDHEVRHIGDLGNIEASPS 214
EHGFHIH G +++G A + GGH +PQ +H P+ + H+GDL + +
Sbjct: 44 EHGFHIHANGSCQPAIKDGQAVAAEAAGGHLDPQNTGKHEGPEGQ-GHLGDLPVLVVNND 102
Query: 215 GVASFEF-EDKIISLTGPYSILGRGLIVHSDKDDFGRGMFNDSTTTGHAGSRVACGVI 271
G+A+ ++ SL + + L++H D+ M + G G+R ACGVI
Sbjct: 103 GIATEPVTAPRLKSLD---EVKDKALMIHVGGDN----MSDQPKPLGGGGTRYACGVI 153
>pdb|1PZS|A Chain A, Crystal Structure Of A Cu-Zn Superoxide Dismutase From
Mycobacterium Tuberculosis At 1.63 Resolution
Length = 208
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 66/173 (38%), Gaps = 37/173 (21%)
Query: 128 SVTSPSGN---VTFIQHDDGTVTVKGFVTGLKKNTAGSQEHGFHIHEKGDLREGCA---- 180
++T+P G + +G TV TG+ K T G HG HIH+ G
Sbjct: 43 TLTAPDGTKVATAKFEFANGYATVTIATTGVGKLTPG--FHGLHIHQVGKCEPNSVAPTG 100
Query: 181 -------SLGGHYNPQQKQHGAPDHE-VRHIGDLGNIEASPSGVASFEFEDKIISLTGPY 232
S GGHY+ P H GDL +++ G A ++
Sbjct: 101 GAPGNFLSAGGHYH-------VPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLL 153
Query: 233 SILGRGLIVHSDKDDFGR-------------GMFNDSTTTGHAGSRVACGVIG 272
S +I+H+ D+F G + TTG AG RVACGVIG
Sbjct: 154 SGAKTAIIIHAGADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVIG 206
>pdb|1GJY|A Chain A, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|B Chain B, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|C Chain C, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|D Chain D, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
Length = 167
Score = 31.2 bits (69), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 26/58 (44%)
Query: 106 DLREGCASLGGHYNPQQGNSSPSVTSPSGNVTFIQHDDGTVTVKGFVTGLKKNTAGSQ 163
+L++ ++G NPQ NS S SG +TF + V ++ ++ + Q
Sbjct: 93 ELQKALTTMGFRLNPQTVNSIAKRYSTSGKITFDDYIACCVKLRALTDSFRRRDSAQQ 150
>pdb|2BTY|A Chain A, Acetylglutamate Kinase From Thermotoga Maritima Complexed
With Its Inhibitor Arginine
pdb|2BTY|B Chain B, Acetylglutamate Kinase From Thermotoga Maritima Complexed
With Its Inhibitor Arginine
pdb|2BTY|C Chain C, Acetylglutamate Kinase From Thermotoga Maritima Complexed
With Its Inhibitor Arginine
Length = 282
Score = 28.1 bits (61), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 28/63 (44%)
Query: 208 NIEASPSGVASFEFEDKIISLTGPYSILGRGLIVHSDKDDFGRGMFNDSTTTGHAGSRVA 267
N + + + +A +K+I LT +L G ++ + D + D T TG +V
Sbjct: 180 NADTAAAEIAKSLMAEKLILLTDVDGVLKDGKLISTLTPDEAEELIRDGTVTGGMIPKVE 239
Query: 268 CGV 270
C V
Sbjct: 240 CAV 242
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.136 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,041,369
Number of Sequences: 62578
Number of extensions: 413107
Number of successful extensions: 1143
Number of sequences better than 100.0: 126
Number of HSP's better than 100.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 830
Number of HSP's gapped (non-prelim): 254
length of query: 274
length of database: 14,973,337
effective HSP length: 97
effective length of query: 177
effective length of database: 8,903,271
effective search space: 1575878967
effective search space used: 1575878967
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 51 (24.3 bits)