BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy944
(689 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P49696|SYVC_TAKRU Valine--tRNA ligase OS=Takifugu rubripes GN=vars PE=3 SV=1
Length = 1217
Score = 380 bits (977), Expect = e-104, Method: Compositional matrix adjust.
Identities = 183/288 (63%), Positives = 226/288 (78%), Gaps = 8/288 (2%)
Query: 191 GQKRDYPQGIPECGTDALRFALAAYMSQGERTGR------RKSIGEKNPKGKFVMVIPPP 244
G+K+D +P+ + + ++ AA+ E+ G RKSIGE+NP+G F+M IPPP
Sbjct: 236 GEKKDVVSPLPD--SYSPQYVEAAWYPWWEKQGFFKPEFGRKSIGEQNPRGIFMMCIPPP 293
Query: 245 NVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAGIATQVVVEKKLWREEKKTR 304
NVTG+LHLGHALTNA++D++TRW+RM+G+TTLWNPGCDHAGIATQVVVEKKL RE+ +R
Sbjct: 294 NVTGSLHLGHALTNAIQDTLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLMREKGTSR 353
Query: 305 HEIGREKFIEKVWEWKKEKGDRIYEQMKLMGSSLDWDRACFTMDPKLSRAVTEAFVILHE 364
H++GREKFIE+VW+WK EKGDRIY Q+K +GSSLDWDRACFTMDPKLS AV EAF+ +H+
Sbjct: 354 HDLGREKFIEEVWKWKNEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSYAVQEAFIRMHD 413
Query: 365 AGDIYRSERLVHWSCSLKSAISDIEVDKVELTGRTPLRVPGYANPVDFGVLASFAYKLDD 424
G IYRS+RLV+WSCSL SAISDIEVDK EL+GRT L VPGY V+FGVL SFAYK+D
Sbjct: 414 EGVIYRSKRLVNWSCSLNSAISDIEVDKNELSGRTLLPVPGYKEKVEFGVLVSFAYKVDG 473
Query: 425 GSGEIVVATTRLETLFADVAVAVHPEDERYKHLVDKVELTGRTPLRVP 472
E+VVATTR+ET+ D AVAVHP D RY+HL K L ++P
Sbjct: 474 SDEEVVVATTRIETMLGDTAVAVHPSDSRYQHLKGKTVLHPFCDRKIP 521
Score = 266 bits (680), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 130/250 (52%), Positives = 164/250 (65%), Gaps = 32/250 (12%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
M ++A AV+ G LKIIPDHH++TW+ W++N RDWCISRQLWWGHRIPAY+++ +DP+ K
Sbjct: 632 MGKQAADAVREGRLKIIPDHHSQTWFNWMDNIRDWCISRQLWWGHRIPAYFITVSDPSVK 691
Query: 61 PKNVTEYELWVSGRSKEEAEQKAISKFNVTQADISLRQDEDVLDTWFSSGLFPFSVFGWP 120
P + VSGR+ EEA +KA +FNV+ I+LRQDEDVLDTWFSSG+ PFS+ GWP
Sbjct: 692 PGEDMDGHYRVSGRTPEEAREKAAKRFNVSPDKIALRQDEDVLDTWFSSGINPFSILGWP 751
Query: 121 DKQ-------------------------------RLSANGIHSEVFLHPIVRDAHGRKMS 149
++ +L+ EV+ +VRDAHGRKMS
Sbjct: 752 NETEDLNVFYPGTLLETGHDILFFWVARMVMMGLKLTGKLPFKEVYHCAVVRDAHGRKMS 811
Query: 150 KSLGNVIDPLDVVKGISLAGLQGRLLQDSNLEAAERQRAADGQKRDYPQGIPECGTDALR 209
KSLGNVIDPLD GI+L GL +L+ D+NL+ E ++ QK DYP IPECGTDALR
Sbjct: 812 KSLGNVIDPLDDHIGIALEGLHAQLM-DTNLDPLEVEKPKKVQKADYPNCIPECGTDALR 870
Query: 210 FALAAYMSQG 219
FAL AY SQG
Sbjct: 871 FALCAYTSQG 880
Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 50/76 (65%)
Query: 607 TELISLSISSQGLIKVDKEIERLNKKEEYLKQVIAKLKDQAAAEDYATKVPENVRTQNSE 666
++ ++++ +GLI V+KE+ +L K+ L++ I KL ++ + DY KVP V+ Q++E
Sbjct: 1135 SDRCTVNMMLKGLIDVEKEVPKLMGKKTDLEKQIEKLSEKISKGDYKEKVPVKVQEQDTE 1194
Query: 667 KLSEAEGELSRLPAAL 682
KL +++ EL ++ A+
Sbjct: 1195 KLRQSQTELEKVKEAM 1210
>sp|P26640|SYVC_HUMAN Valine--tRNA ligase OS=Homo sapiens GN=VARS PE=1 SV=4
Length = 1264
Score = 373 bits (958), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/278 (65%), Positives = 221/278 (79%), Gaps = 10/278 (3%)
Query: 191 GQKRDYPQGIPECGTDALRFALAAYMSQGERTG------RRKSIGEKNPKGKFVMVIPPP 244
G+K+D +P+ + + R+ AA+ E+ G R ++ NP+G F+M IPPP
Sbjct: 287 GEKKDVSGPMPD--SYSPRYVEAAWYPWWEQQGFFKPEYGRPNVSAANPRGVFMMCIPPP 344
Query: 245 NVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAGIATQVVVEKKLWREEKKTR 304
NVTG+LHLGHALTNA++DS+TRW+RM+G+TTLWNPGCDHAGIATQVVVEKKLWRE+ +R
Sbjct: 345 NVTGSLHLGHALTNAIQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLWREQGLSR 404
Query: 305 HEIGREKFIEKVWEWKKEKGDRIYEQMKLMGSSLDWDRACFTMDPKLSRAVTEAFVILHE 364
H++GRE F+++VW+WK+EKGDRIY Q+K +GSSLDWDRACFTMDPKLS AVTEAFV LHE
Sbjct: 405 HQLGREAFLQEVWKWKEEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSAAVTEAFVRLHE 464
Query: 365 AGDIYRSERLVHWSCSLKSAISDIEVDKVELTGRTPLRVPGYANPVDFGVLASFAYKL-- 422
G IYRS RLV+WSC+L SAISDIEVDK ELTGRT L VPGY V+FGVL SFAYK+
Sbjct: 465 EGIIYRSTRLVNWSCTLNSAISDIEVDKKELTGRTLLSVPGYKEKVEFGVLVSFAYKVQG 524
Query: 423 DDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVDK 460
D E+VVATTR+ET+ DVAVAVHP+D RY+HL K
Sbjct: 525 SDSDEEVVVATTRIETMLGDVAVAVHPKDTRYQHLKGK 562
Score = 278 bits (711), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 135/250 (54%), Positives = 170/250 (68%), Gaps = 32/250 (12%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
MA+ A AV G+L+I+P+ H +TW+ W++N R+WCISRQLWWGHRIPAY+V+ +DPA
Sbjct: 685 MAQAASAAVTRGDLRILPEAHQRTWHAWMDNIREWCISRQLWWGHRIPAYFVTVSDPAVP 744
Query: 61 PKNVTEYELWVSGRSKEEAEQKAISKFNVTQADISLRQDEDVLDTWFSSGLFPFSVFGWP 120
P + WVSGR++ EA +KA +F V+ ISL+QDEDVLDTWFSSGLFP S+ GWP
Sbjct: 745 PGEDPDGRYWVSGRNEAEAREKAAKEFGVSPDKISLQQDEDVLDTWFSSGLFPLSILGWP 804
Query: 121 DKQ-------------------------------RLSANGIHSEVFLHPIVRDAHGRKMS 149
++ +L+ EV+LH IVRDAHGRKMS
Sbjct: 805 NQSEDLSVFYPGTLLETGHDILFFWVARMVMLGLKLTGRLPFREVYLHAIVRDAHGRKMS 864
Query: 150 KSLGNVIDPLDVVKGISLAGLQGRLLQDSNLEAAERQRAADGQKRDYPQGIPECGTDALR 209
KSLGNVIDPLDV+ GISL GL +LL +SNL+ +E ++A +GQK D+P GIPECGTDALR
Sbjct: 865 KSLGNVIDPLDVIYGISLQGLHNQLL-NSNLDPSEVEKAKEGQKADFPAGIPECGTDALR 923
Query: 210 FALAAYMSQG 219
F L AYMSQG
Sbjct: 924 FGLCAYMSQG 933
Score = 179 bits (455), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 90/166 (54%), Positives = 115/166 (69%), Gaps = 6/166 (3%)
Query: 458 VDKVELTGRTPLRVPGYANPVDFGVLASFAYKLE--DGSGEIVVATTRLETLFADVAVAV 515
VDK ELTGRT L VPGY V+FGVL SFAYK++ D E+VVATTR+ET+ DVAVAV
Sbjct: 490 VDKKELTGRTLLSVPGYKEKVEFGVLVSFAYKVQGSDSDEEVVVATTRIETMLGDVAVAV 549
Query: 516 HPEDERYKHLVGKLLVHPFCERKIPILADSFVEKDFGTGAVKISPGHDHNDYEVAQRLNL 575
HP+D RY+HL GK ++HPF R +PI+ D FV+ DFGTGAVKI+P HD NDYEV QR L
Sbjct: 550 HPKDTRYQHLKGKNVIHPFLSRSLPIVFDEFVDMDFGTGAVKITPAHDQNDYEVGQRHGL 609
Query: 576 PLITVFNEEGVIIGDYGEFTGMKRFDARTRVTELISLSISSQGLIK 621
I++ + G +I F G+ RF+AR V +++ +GL +
Sbjct: 610 EAISIMDSRGALINVPPPFLGLPRFEARKAVL----VALKERGLFR 651
Score = 41.6 bits (96), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 43/80 (53%)
Query: 607 TELISLSISSQGLIKVDKEIERLNKKEEYLKQVIAKLKDQAAAEDYATKVPENVRTQNSE 666
++ S+ + QGL+ +E+ +L K ++ +L+++ AA Y KVP V+ +
Sbjct: 1182 SDRCSIHLQLQGLVDPARELGKLQAKRVEAQRQAQRLRERRAASGYPVKVPLEVQEADEA 1241
Query: 667 KLSEAEGELSRLPAALAALK 686
KL + E EL ++ A+A +
Sbjct: 1242 KLQQTEAELRKVDEAIALFQ 1261
>sp|Q9Z1Q9|SYVC_MOUSE Valine--tRNA ligase OS=Mus musculus GN=Vars PE=2 SV=1
Length = 1263
Score = 372 bits (954), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/279 (64%), Positives = 217/279 (77%), Gaps = 10/279 (3%)
Query: 191 GQKRDYPQGIPECGTDALRFALAAYMSQGERTG------RRKSIGEKNPKGKFVMVIPPP 244
G+K+D +P+ + + ++ AA+ ER G R S+ NP+G F+M IPPP
Sbjct: 286 GEKKDVSGAMPD--SYSPQYVEAAWYPWWERQGFFKPEYGRPSVSAPNPRGVFMMCIPPP 343
Query: 245 NVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAGIATQVVVEKKLWREEKKTR 304
NVTG+LHLGHALTNA++DS+TRW+RM+G+TTLWNPGCDHAGIATQVVVEKKLW+E R
Sbjct: 344 NVTGSLHLGHALTNAIQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLWKERGLNR 403
Query: 305 HEIGREKFIEKVWEWKKEKGDRIYEQMKLMGSSLDWDRACFTMDPKLSRAVTEAFVILHE 364
H++GRE F+E+VW+WK EKGDRIY Q+K +GSSLDWDRACFTMDPKLS VTEAFV LHE
Sbjct: 404 HQLGREAFLEEVWKWKAEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSATVTEAFVRLHE 463
Query: 365 AGDIYRSERLVHWSCSLKSAISDIEVDKVELTGRTPLRVPGYANPVDFGVLASFAYKL-- 422
G IYRS RLV+WSC+L SAISDIEVDK ELTGRT L VPGY V+FGVL SFAYK+
Sbjct: 464 EGVIYRSTRLVNWSCTLNSAISDIEVDKKELTGRTLLPVPGYKEKVEFGVLVSFAYKVQG 523
Query: 423 DDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVDKV 461
D E+VVATTR+ET+ DVAVAVHP+D RY+HL K
Sbjct: 524 SDSDEEVVVATTRIETMLGDVAVAVHPKDPRYQHLKGKC 562
Score = 280 bits (717), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 135/250 (54%), Positives = 171/250 (68%), Gaps = 32/250 (12%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
MA+ A AV G+L+I+P+ H +TW+ W++N RDWCISRQLWWGHRIPAY+++ +DPA
Sbjct: 684 MAQAASAAVTRGDLRILPEAHQRTWHSWMDNIRDWCISRQLWWGHRIPAYFITVHDPAVP 743
Query: 61 PKNVTEYELWVSGRSKEEAEQKAISKFNVTQADISLRQDEDVLDTWFSSGLFPFSVFGWP 120
P + WVSGR++ EA +KA +F V+ ISL+QDEDVLDTWFSSGLFPFS+FGWP
Sbjct: 744 PGEDPDGRYWVSGRTEAEAREKAAREFGVSPDKISLQQDEDVLDTWFSSGLFPFSIFGWP 803
Query: 121 DKQ-------------------------------RLSANGIHSEVFLHPIVRDAHGRKMS 149
++ +L+ EV+LH IVRDAHGRKMS
Sbjct: 804 NQSEDLSVFYPGTLLETGHDILFFWVARMVMLGLKLTGKLPFREVYLHAIVRDAHGRKMS 863
Query: 150 KSLGNVIDPLDVVKGISLAGLQGRLLQDSNLEAAERQRAADGQKRDYPQGIPECGTDALR 209
KSLGNVIDPLDV+ G+SL GL +LL +SNL+ +E ++A +GQK D+P GIPECGTDALR
Sbjct: 864 KSLGNVIDPLDVIHGVSLQGLYDQLL-NSNLDPSEVEKAKEGQKADFPAGIPECGTDALR 922
Query: 210 FALAAYMSQG 219
F L AY SQG
Sbjct: 923 FGLCAYTSQG 932
Score = 179 bits (454), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 88/151 (58%), Positives = 109/151 (72%), Gaps = 2/151 (1%)
Query: 458 VDKVELTGRTPLRVPGYANPVDFGVLASFAYKLE--DGSGEIVVATTRLETLFADVAVAV 515
VDK ELTGRT L VPGY V+FGVL SFAYK++ D E+VVATTR+ET+ DVAVAV
Sbjct: 489 VDKKELTGRTLLPVPGYKEKVEFGVLVSFAYKVQGSDSDEEVVVATTRIETMLGDVAVAV 548
Query: 516 HPEDERYKHLVGKLLVHPFCERKIPILADSFVEKDFGTGAVKISPGHDHNDYEVAQRLNL 575
HP+D RY+HL GK +VHPF R +PI+ D FV+ +FGTGAVKI+P HD NDYEV QR L
Sbjct: 549 HPKDPRYQHLKGKCVVHPFLSRSLPIVFDDFVDMEFGTGAVKITPAHDQNDYEVGQRHRL 608
Query: 576 PLITVFNEEGVIIGDYGEFTGMKRFDARTRV 606
I++ + +G +I F G+ RF+AR V
Sbjct: 609 EAISIMDSKGALINVPPPFLGLPRFEARKAV 639
Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 44/80 (55%)
Query: 607 TELISLSISSQGLIKVDKEIERLNKKEEYLKQVIAKLKDQAAAEDYATKVPENVRTQNSE 666
++ S+ + QGL+ +E+ +L K ++ +L+++ AA Y+ KVP V+ +
Sbjct: 1181 SDRCSIHLQLQGLVDPARELGKLQAKRSEAQRQAQRLQERRAASSYSAKVPLEVQEADEA 1240
Query: 667 KLSEAEGELSRLPAALAALK 686
KL + E EL ++ A+A +
Sbjct: 1241 KLQQTEAELRKVDEAIALFQ 1260
>sp|Q04462|SYVC_RAT Valine--tRNA ligase OS=Rattus norvegicus GN=Vars PE=2 SV=2
Length = 1264
Score = 370 bits (950), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/278 (64%), Positives = 217/278 (78%), Gaps = 10/278 (3%)
Query: 191 GQKRDYPQGIPECGTDALRFALAAYMSQGERTG------RRKSIGEKNPKGKFVMVIPPP 244
G+K+D +P+ + + ++ AA+ ER G R S+ NP+G F+M IPPP
Sbjct: 287 GEKKDVSGTMPD--SYSPQYVEAAWYPWWERQGFFKPEYGRPSVSAPNPRGVFMMCIPPP 344
Query: 245 NVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAGIATQVVVEKKLWREEKKTR 304
NVTG+LHLGHALTNA++DS+TRW+RM+G+TTLWNPGCDHAGIATQVVVEKKLW+E R
Sbjct: 345 NVTGSLHLGHALTNAIQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLWKERGLNR 404
Query: 305 HEIGREKFIEKVWEWKKEKGDRIYEQMKLMGSSLDWDRACFTMDPKLSRAVTEAFVILHE 364
H++GRE F+++VW+WK EKGDRIY Q+K +GSSLDWDRACFTMDPKLS VTEAFV LHE
Sbjct: 405 HQLGREAFLQEVWKWKAEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSATVTEAFVRLHE 464
Query: 365 AGDIYRSERLVHWSCSLKSAISDIEVDKVELTGRTPLRVPGYANPVDFGVLASFAYKL-- 422
G IYRS RLV+WSC+L SAISDIEVDK ELTGRT L VPGY V+FGVL SFAYK+
Sbjct: 465 EGVIYRSTRLVNWSCTLNSAISDIEVDKKELTGRTLLSVPGYKEKVEFGVLVSFAYKVQG 524
Query: 423 DDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVDK 460
D E+VVATTR+ET+ DVAVAVHP+D RY+HL K
Sbjct: 525 SDSDEEVVVATTRIETMLGDVAVAVHPKDPRYQHLKGK 562
Score = 280 bits (715), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 134/250 (53%), Positives = 171/250 (68%), Gaps = 32/250 (12%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
MA+ A AV G+L+I+P+ H +TW+ W++N RDWCISRQLWWGHRIPAY+++ +DPA
Sbjct: 685 MAQAASAAVTRGDLRILPEAHQRTWHSWMDNIRDWCISRQLWWGHRIPAYFITVHDPAVP 744
Query: 61 PKNVTEYELWVSGRSKEEAEQKAISKFNVTQADISLRQDEDVLDTWFSSGLFPFSVFGWP 120
P + WVSGR++ EA +KA +F V+ ISL+QDEDVLDTWFSSGLFPFS+FGWP
Sbjct: 745 PGEDPDGRYWVSGRTEAEAREKAAREFGVSPDKISLQQDEDVLDTWFSSGLFPFSIFGWP 804
Query: 121 DKQ-------------------------------RLSANGIHSEVFLHPIVRDAHGRKMS 149
++ +L+ EV+LH IVRDAHGRKMS
Sbjct: 805 NQSEDLSVFYPGTLLETGHDILFFWVARMVMLGLKLTEKLPFREVYLHAIVRDAHGRKMS 864
Query: 150 KSLGNVIDPLDVVKGISLAGLQGRLLQDSNLEAAERQRAADGQKRDYPQGIPECGTDALR 209
KSLGNVIDPLDV+ G+SL GL +LL +SNL+ +E ++A +GQ+ D+P GIPECGTDALR
Sbjct: 865 KSLGNVIDPLDVIHGVSLQGLHDQLL-NSNLDPSEVEKAKEGQRADFPAGIPECGTDALR 923
Query: 210 FALAAYMSQG 219
F L AY SQG
Sbjct: 924 FGLCAYTSQG 933
Score = 179 bits (455), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 91/170 (53%), Positives = 117/170 (68%), Gaps = 6/170 (3%)
Query: 458 VDKVELTGRTPLRVPGYANPVDFGVLASFAYKLE--DGSGEIVVATTRLETLFADVAVAV 515
VDK ELTGRT L VPGY V+FGVL SFAYK++ D E+VVATTR+ET+ DVAVAV
Sbjct: 490 VDKKELTGRTLLSVPGYKEKVEFGVLVSFAYKVQGSDSDEEVVVATTRIETMLGDVAVAV 549
Query: 516 HPEDERYKHLVGKLLVHPFCERKIPILADSFVEKDFGTGAVKISPGHDHNDYEVAQRLNL 575
HP+D RY+HL GK +VHPF R +PI+ D FV+ +FGTGAVKI+P HD NDYEV QR L
Sbjct: 550 HPKDPRYQHLKGKSVVHPFLSRSLPIVFDDFVDMEFGTGAVKITPAHDQNDYEVGQRHRL 609
Query: 576 PLITVFNEEGVIIGDYGEFTGMKRFDARTRVTELISLSISSQGLIKVDKE 625
I++ + +G ++ F G+ RF+AR V ++ QGL + K+
Sbjct: 610 EAISIMDSKGALVNVPPPFLGLPRFEARKAVLA----ALKEQGLFRGIKD 655
Score = 42.4 bits (98), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 44/80 (55%)
Query: 607 TELISLSISSQGLIKVDKEIERLNKKEEYLKQVIAKLKDQAAAEDYATKVPENVRTQNSE 666
++ S+ + QGL+ +E+ +L K ++ +L+++ AA Y+ KVP V+ +
Sbjct: 1182 SDRCSIHLQLQGLVDPARELGKLQAKRSEAQRQAQRLQERRAASGYSAKVPLEVQEADEV 1241
Query: 667 KLSEAEGELSRLPAALAALK 686
KL + E EL ++ A+A +
Sbjct: 1242 KLQQTEAELRKVDEAIALFQ 1261
>sp|Q9U1Q4|SYV_CAEEL Valine--tRNA ligase OS=Caenorhabditis elegans GN=vrs-2 PE=1 SV=1
Length = 1050
Score = 348 bits (893), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 183/379 (48%), Positives = 230/379 (60%), Gaps = 67/379 (17%)
Query: 232 NPKGKFVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAGIATQVV 291
NP F + IPPPNVTG LH+GHAL VED+ITR+NRM GK TL+NPGCDHAGIATQVV
Sbjct: 115 NPADSFTVCIPPPNVTGNLHVGHALATTVEDTITRFNRMHGKRTLFNPGCDHAGIATQVV 174
Query: 292 VEKKLWREEKKTRHEIGREKFIEKVWEWKKEKGDRIYEQMKLMGSSLDWDRACFTMDPKL 351
VEK+L RE TRH++GR++F ++VW WK EKGD IY+Q + +G+S+DWDRA FTMDPK+
Sbjct: 175 VEKRLKRERGLTRHDLGRDRFNQEVWHWKNEKGDVIYDQFRKLGASVDWDRAVFTMDPKM 234
Query: 352 SRAVTEAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVDKVELTGRTPLRVPGYANPVD 411
RAVTEAF+ +HE+G IYRS RLV+WSC+L+SAISDIEVDK ELTG T + VPGY ++
Sbjct: 235 CRAVTEAFIRMHESGTIYRSNRLVNWSCALRSAISDIEVDKKELTGSTLIAVPGYDKKIE 294
Query: 412 FGVLASFAYKLDDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVDKVELTGRTPLRV 471
FGVL SFAYK+ EIVV+TTR+ET+ D VAVHP+D+RYKHLV K + P R
Sbjct: 295 FGVLNSFAYKIQGSDEEIVVSTTRIETMLGDSGVAVHPDDQRYKHLVGKQCIHPFIPTR- 353
Query: 472 PGYANPVDFGVLASFAYKLEDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVGKLLV 531
+ + A ++E G+G AV + P + + VG
Sbjct: 354 -------NLPIFADSFVEMEFGTG----------------AVKITPAHDHNDYEVGI--- 387
Query: 532 HPFCERKIPILADSFVEKDFGTGAVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDY 591
R NLP ++G+I
Sbjct: 388 ----------------------------------------RQNLPFHNCITDDGLISQGC 407
Query: 592 GEFTGMKRFDARTRVTELI 610
GEF+GMKRFDART V E +
Sbjct: 408 GEFSGMKRFDARTAVIEAL 426
Score = 275 bits (704), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 138/250 (55%), Positives = 167/250 (66%), Gaps = 34/250 (13%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
MAEKAV AV G+L+IIP+ H TW +WLE++RDWCISRQLWWGHRIPAYY+SF D ++
Sbjct: 467 MAEKAVAAVANGDLQIIPEFHKATWNRWLESSRDWCISRQLWWGHRIPAYYISFADGREQ 526
Query: 61 PKNVTEYELWVSGRSKEEAEQKAISKFNVTQADISLRQDEDVLDTWFSSGLFPFSVFGWP 120
P + E WVS R+++EA KA KF V +A+I L+ DEDVLDTWFSSG++PF+VFGWP
Sbjct: 527 P--LPEENYWVSARTEQEALAKAAQKFQVPEAEILLKWDEDVLDTWFSSGMWPFAVFGWP 584
Query: 121 DK-------------------------------QRLSANGIHSEVFLHPIVRDAHGRKMS 149
D Q L+ E+ LH ++RDAHGRKMS
Sbjct: 585 DATKDMDLFFPGAVLETGHDILFFWVARMVFMAQELTGKLPFKEILLHAMIRDAHGRKMS 644
Query: 150 KSLGNVIDPLDVVKGISLAGLQGRLLQDSNLEAAERQRAADGQKRDYPQGIPECGTDALR 209
KSLGNVIDPLDV++GISL LQ +LL NL+ E A +GQ RDYP GIPECG DALR
Sbjct: 645 KSLGNVIDPLDVIRGISLNDLQAQLL-GGNLDEKEIAVAKEGQARDYPDGIPECGVDALR 703
Query: 210 FALAAYMSQG 219
FAL +Y SQG
Sbjct: 704 FALLSYTSQG 713
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%)
Query: 577 LITVFNEEGVIIGDYGEFTGMKRFDARTRVTELISLSISSQGLIKVDKEIERLNKKEEYL 636
+ T+ E V I + E +++ A + I+ G+I V KEIE+L K +
Sbjct: 938 ITTLTFSEKVSILNKCESDKIEKGSAHIACGGRCQVYINLTGIIDVPKEIEKLGAKLQKN 997
Query: 637 KQVIAKLKDQAAAEDYATKVPENVRTQNSEKLSEAEGELSRLPAALAALKLIQ 689
+ + K+ D ++ DY KVP ++R + EK + E E+ + AA+A LK +
Sbjct: 998 QISVKKIGDIQSSADYEQKVPVDIRALDQEKKATLEKEIENITAAIAQLKALN 1050
>sp|P93736|SYV_ARATH Valine--tRNA ligase OS=Arabidopsis thaliana GN=VALRS PE=1 SV=2
Length = 1108
Score = 335 bits (858), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 178/399 (44%), Positives = 238/399 (59%), Gaps = 74/399 (18%)
Query: 231 KNPKGKFVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAGIATQV 290
K+ K FV+V+PPPNVTG LH+GHALT+A+ED+I RW RM G LW PG DHAGIATQV
Sbjct: 164 KSSKPPFVIVLPPPNVTGALHIGHALTSAIEDTIIRWKRMSGYNALWVPGVDHAGIATQV 223
Query: 291 VVEKKLWREEKKTRHEIGREKFIEKVWEWKKEKGDRIYEQMKLMGSSLDWDRACFTMDPK 350
VVEKK+ R+ TRH++GRE+F+++VW+WK + G I Q++ +G+SLDW R CFTMD +
Sbjct: 224 VVEKKIMRDRGMTRHDVGREEFVKEVWKWKNQYGGTILTQLRRLGASLDWSRECFTMDEQ 283
Query: 351 LSRAVTEAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVDKVELTGRTPLRVPGYANPV 410
S+AVTEAFV L++ G IYR RLV+W C L++AISD+EV+ +++ +T L+VPGY PV
Sbjct: 284 RSKAVTEAFVRLYKEGLIYRDIRLVNWDCILRTAISDVEVEYIDIKEKTLLKVPGYEKPV 343
Query: 411 DFGVLASFAYKLDDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVDKVELTGRTPLR 470
+FG+L SFAY L+ G GE++VATTR+ET+ D A+A+HP+D RYKHL K
Sbjct: 344 EFGLLTSFAYPLEGGLGEVIVATTRVETMLGDTAIAIHPDDARYKHLHGK---------- 393
Query: 471 VPGYANPVDFGVLASFAYKLEDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVGK-L 529
AVHP + R ++ +
Sbjct: 394 ------------------------------------------FAVHPFNGRKLPIICDGI 411
Query: 530 LVHPFCERKIPILADSFVEKDFGTGAVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIG 589
LV P +FGTG VKI+P HD ND EV +R L I +F ++G I
Sbjct: 412 LVDP----------------NFGTGCVKITPAHDPNDCEVGKRHKLEFINIFTDDGKINT 455
Query: 590 DYG-EFTGMKRFDARTRVTELISLSISSQGLIKVDKEIE 627
+ G +F GM RF AR V E ++ QGL + K E
Sbjct: 456 NGGSDFAGMPRFAAREAVVE----ALQKQGLYRGAKNNE 490
Score = 221 bits (564), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 112/241 (46%), Positives = 148/241 (61%), Gaps = 37/241 (15%)
Query: 13 ELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKKPKNVTEY-ELWV 71
+L+ +P +T W +WLEN RDWCISRQLWWGHRIPA+Y + + + K V Y + WV
Sbjct: 533 KLEFVPKQYTAEWRRWLENIRDWCISRQLWWGHRIPAWYATLEE--DQLKEVGAYSDHWV 590
Query: 72 SGRSKEEAEQKAISKFNVTQADISLRQDEDVLDTWFSSGLFPFSVFGWPD---------- 121
R++++A ++A KF L +D DVLDTWFSSGLFP SV GWPD
Sbjct: 591 VARTEDDAREEAAQKF--LGKKFELTRDPDVLDTWFSSGLFPLSVLGWPDVTDDFKAFYP 648
Query: 122 ---------------------KQRLSANGIHSEVFLHPIVRDAHGRKMSKSLGNVIDPLD 160
+L S+V+ HP++RDAHGRKMSKSLGNVIDPL+
Sbjct: 649 TSVLETGHDILFFWVARMVMMGMKLGGEVPFSKVYFHPMIRDAHGRKMSKSLGNVIDPLE 708
Query: 161 VVKGISLAGLQGRLLQDSNLEAAERQRAADGQKRDYPQGIPECGTDALRFALAAYMSQGE 220
V+ G++L GL R L++ NL+ E A +GQ +D+P GIPECGTDALRFAL +Y +Q +
Sbjct: 709 VINGVTLEGLHKR-LEEGNLDPKEVIVAKEGQVKDFPNGIPECGTDALRFALVSYTAQSD 767
Query: 221 R 221
+
Sbjct: 768 K 768
Score = 33.5 bits (75), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%)
Query: 606 VTELISLSISSQGLIKVDKEIERLNKKEEYLKQVIAKLKDQAAAEDYATKVPENVRTQNS 665
V E + + + G I + E E++ K L++ KL+ + Y KVP N++ N+
Sbjct: 1019 VNENLKVYLEVDGAINTEAEQEKIRNKIGELQKQKEKLQKMMSVSTYEEKVPANIKEDNA 1078
Query: 666 EKLSE 670
KL++
Sbjct: 1079 NKLAK 1083
>sp|Q86KU2|SYVC_DICDI Probable valine--tRNA ligase, cytoplasmic OS=Dictyostelium
discoideum GN=valS1 PE=3 SV=1
Length = 1072
Score = 300 bits (768), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 142/250 (56%), Positives = 184/250 (73%), Gaps = 4/250 (1%)
Query: 236 KFVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAGIATQVVVEKK 295
KFV+VIPPPNVTG+LHLGHALTN+++D++ R++RMKG+ LW PG DHAGIATQVVVEKK
Sbjct: 143 KFVIVIPPPNVTGSLHLGHALTNSIQDAVVRYHRMKGEVCLWVPGTDHAGIATQVVVEKK 202
Query: 296 LWREEKKTRHEIGREKFIEKVWEWKKEKGDRIYEQMKLMGSSLDWDRACFTMDPKLSRAV 355
+W+E K TRH++GRE FI+KVWEWK E G RI Q+K MGSS+DW R FTMD + S+AV
Sbjct: 203 IWKENKITRHDLGREGFIKKVWEWKGEYGARIQGQLKKMGSSVDWSREVFTMDDQRSKAV 262
Query: 356 TEAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVDKVELTGRTPLRVPGYANPVDFGVL 415
AF+ + G I R+ RLV+WSC+LK+AISDIEVD ++L T + VPG+ DFGVL
Sbjct: 263 NTAFIRMFNDGLIVRTTRLVNWSCALKTAISDIEVDFIDLEKHTKMSVPGHQGQYDFGVL 322
Query: 416 ASFAYKLDDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVDKVELTGRTPLRVPGYA 475
FAY+++ E+VVATTR+ET+ AD A+A+HP+D RY HL K + ++P
Sbjct: 323 FEFAYQVEGSGEELVVATTRIETMLADTAIAIHPDDTRYTHLHGKFAIHPLNGRKIPIIT 382
Query: 476 NPV----DFG 481
+ V DFG
Sbjct: 383 DSVLVDKDFG 392
Score = 252 bits (644), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 128/252 (50%), Positives = 159/252 (63%), Gaps = 37/252 (14%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
MA +AV+AV+ G+LKI P H TWY+WLE +DWC+SRQLWWGHRIPAY+
Sbjct: 492 MAARAVKAVRDGDLKITPKTHEVTWYRWLEGIKDWCVSRQLWWGHRIPAYHCIIKGVKSN 551
Query: 61 PKNVTEYELWVSGRSKEEAEQKAISKFNVTQAD--ISLRQDEDVLDTWFSSGLFPFSVFG 118
P + + WV G ++EEA Q AI KF ++ D +SL QD DVLDTWFSSGLFPFSV G
Sbjct: 552 PYDTNQ---WVVGANQEEATQNAIEKFKLSSKDDILSLEQDPDVLDTWFSSGLFPFSVMG 608
Query: 119 WPDK-------------------------------QRLSANGIHSEVFLHPIVRDAHGRK 147
WP++ Q+L+ +VFLH +VRD+HGRK
Sbjct: 609 WPEQTQDMQDYYPTSLLETGSDILFFWVARMVMMGQQLTGKLPFEQVFLHAMVRDSHGRK 668
Query: 148 MSKSLGNVIDPLDVVKGISLAGLQGRLLQDSNLEAAERQRAADGQKRDYPQGIPECGTDA 207
MSKSLGNVIDP DV+KGISL L +L + NL++ E ++A G K D+P GI ECGTDA
Sbjct: 669 MSKSLGNVIDPNDVIKGISLDELIAKLYE-GNLDSKEIEKATSGVKSDFPTGIAECGTDA 727
Query: 208 LRFALAAYMSQG 219
+RFAL AY SQG
Sbjct: 728 MRFALCAYTSQG 739
Score = 176 bits (446), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 123/200 (61%), Gaps = 11/200 (5%)
Query: 413 GVLASFAYKLDDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVDKVELTGRTPLRVP 472
V +F +DG ++V TTRL + A+ + VD ++L T + VP
Sbjct: 261 AVNTAFIRMFNDG---LIVRTTRLVNWSCALKTAISDIE------VDFIDLEKHTKMSVP 311
Query: 473 GYANPVDFGVLASFAYKLEDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVGKLLVH 532
G+ DFGVL FAY++E E+VVATTR+ET+ AD A+A+HP+D RY HL GK +H
Sbjct: 312 GHQGQYDFGVLFEFAYQVEGSGEELVVATTRIETMLADTAIAIHPDDTRYTHLHGKFAIH 371
Query: 533 PFCERKIPILADS-FVEKDFGTGAVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDY 591
P RKIPI+ DS V+KDFGTG VKI+P HD NDYE A R L I +F +EG+I +
Sbjct: 372 PLNGRKIPIITDSVLVDKDFGTGVVKITPSHDPNDYETALRHGLEFINLFTDEGLINENG 431
Query: 592 GE-FTGMKRFDARTRVTELI 610
GE F GMKRFDAR V E +
Sbjct: 432 GERFAGMKRFDARNAVVEAL 451
Score = 33.5 bits (75), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 606 VTELISLSISSQGLIKVDKEIERLNKKEEYLKQVIAKLKDQAAAEDYATKVPENVRTQNS 665
V E +S + +G + + EI RL K++ L + L + Y KVP+N+R N+
Sbjct: 989 VNENVSTLLDVRGSVDFNLEIARLETKKQQLVKNYETLVSKTTIPSY-DKVPQNIRDDNT 1047
Query: 666 EKLSEAEGELS 676
+K+ + E++
Sbjct: 1048 QKIKALDEEIN 1058
>sp|Q6MG21|SYVM_RAT Valine--tRNA ligase, mitochondrial OS=Rattus norvegicus GN=Vars2
PE=3 SV=1
Length = 1065
Score = 294 bits (753), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 139/222 (62%), Positives = 169/222 (76%), Gaps = 1/222 (0%)
Query: 237 FVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAGIATQVVVEKKL 296
F M IPPPNVTG+LH+GHALT A++D+ RW+RM+G LW PG DHAGIATQ VVEK+L
Sbjct: 139 FSMCIPPPNVTGSLHIGHALTVAIQDAFVRWHRMRGDRVLWIPGSDHAGIATQAVVEKQL 198
Query: 297 WREEKKTRHEIGREKFIEKVWEWKKEKGDRIYEQMKLMGSSLDWDRACFTMDPKLSRAVT 356
WRE + RHE+ RE F+ VW+WK+EKG IYEQ+ +G+SLDWDR CFTMD S AVT
Sbjct: 199 WRERRVRRHELSREDFLRAVWQWKQEKGGEIYEQLCALGASLDWDRECFTMDAGSSAAVT 258
Query: 357 EAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVDKVELTGRTPLRVPGYANPVDFGVLA 416
EAFV L++ G +YR+ +LV+WSC+L+SAISDIEV+ L GRT LR+PG PV FG+L
Sbjct: 259 EAFVRLYDLGLLYRNRQLVNWSCTLRSAISDIEVESRPLPGRTVLRLPGCPIPVSFGLLV 318
Query: 417 SFAYKLDDGSG-EIVVATTRLETLFADVAVAVHPEDERYKHL 457
S A+ +D G EIVV TTR ETL DVAVAVHP+D RY HL
Sbjct: 319 SIAFPVDGDPGTEIVVGTTRPETLPGDVAVAVHPDDPRYTHL 360
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 109/246 (44%), Positives = 145/246 (58%), Gaps = 37/246 (15%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
M ++A +AV++G L++ P H K+W W + DWC+SRQLWWGH+IPAY V +K
Sbjct: 487 MGDRAAKAVESGALELWPSFHQKSWQHWFAHIGDWCVSRQLWWGHQIPAYRVG----GEK 542
Query: 61 PKNVTEYELWVSGRSKEEAEQKAISKFNVTQADISLRQDEDVLDTWFSSGLFPFSVFGWP 120
++ E E WV GRS+ EA A + +A+++L +D DVLDTWFSS LFPFS GWP
Sbjct: 543 AEDDRE-ECWVVGRSEAEARAAAAKQTGRPEAELTLERDPDVLDTWFSSALFPFSALGWP 601
Query: 121 DK-------------------------------QRLSANGIHSEVFLHPIVRDAHGRKMS 149
+ +L+ S+V LH +VRD GRKMS
Sbjct: 602 QETPDLARFYPLTLLETGSDLLTFWVGRMVMLGTQLTGQLPFSKVLLHSMVRDRQGRKMS 661
Query: 150 KSLGNVIDPLDVVKGISLAGLQGRLLQDSNLEAAERQRAADGQKRDYPQGIPECGTDALR 209
KSLGNV+DP D++ G L LQ + L+D NL+ E AA QK+D+P GIPECGTDALR
Sbjct: 662 KSLGNVLDPRDIISGQELQVLQAK-LRDGNLDQGELAVAAAAQKKDFPYGIPECGTDALR 720
Query: 210 FALAAY 215
FAL ++
Sbjct: 721 FALCSH 726
>sp|Q3U2A8|SYVM_MOUSE Valine--tRNA ligase, mitochondrial OS=Mus musculus GN=Vars2 PE=2
SV=2
Length = 1060
Score = 291 bits (746), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 136/222 (61%), Positives = 171/222 (77%), Gaps = 1/222 (0%)
Query: 237 FVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAGIATQVVVEKKL 296
F M IPPPNVTG+LH+GHALT A++D++ RW+RM+G LW PG DHAGIATQ +VEK+L
Sbjct: 139 FSMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMRGDRVLWIPGSDHAGIATQAMVEKQL 198
Query: 297 WREEKKTRHEIGREKFIEKVWEWKKEKGDRIYEQMKLMGSSLDWDRACFTMDPKLSRAVT 356
W+E++ RHE+ RE F+ VW+WK EKG IYEQ+ +G+SLDWDR CFTMD S AVT
Sbjct: 199 WKEQRVRRHELSREDFLRAVWQWKHEKGGEIYEQLCALGASLDWDRECFTMDAGSSAAVT 258
Query: 357 EAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVDKVELTGRTPLRVPGYANPVDFGVLA 416
EAFV L+ +G +YR+ +LV+WSC+L+SAISDIEV+ L GRT L++PG PV FG+LA
Sbjct: 259 EAFVRLYNSGLLYRNRQLVNWSCTLRSAISDIEVESRPLPGRTVLQLPGCPTPVSFGLLA 318
Query: 417 SFAYKLD-DGSGEIVVATTRLETLFADVAVAVHPEDERYKHL 457
S A+ +D + EIVV TTR ETL DVAVAVHP+D RY HL
Sbjct: 319 SVAFPVDGEPDTEIVVGTTRPETLPGDVAVAVHPDDPRYTHL 360
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/246 (43%), Positives = 141/246 (57%), Gaps = 37/246 (15%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
M + A +AV++G L++ P H K+W W + DWC+SRQLWWGH+IPAY V +
Sbjct: 487 MGDLAAKAVESGALELWPSFHQKSWQHWFAHIGDWCVSRQLWWGHQIPAYRVIGENAEDD 546
Query: 61 PKNVTEYELWVSGRSKEEAEQKAISKFNVTQADISLRQDEDVLDTWFSSGLFPFSVFGWP 120
K E WV GRS+ EA A + +A+++L +D DVLDTWFSS LFPFS GWP
Sbjct: 547 RK-----ECWVVGRSEAEARAVAAKRTGRPEAELTLERDPDVLDTWFSSALFPFSALGWP 601
Query: 121 DK-------------------------------QRLSANGIHSEVFLHPIVRDAHGRKMS 149
+ +L+ S+V LH +VRD GRKMS
Sbjct: 602 RETPDLAHFYPLTLLETGSDLLMFWVGRMVMLGTQLTGQLPFSKVLLHSMVRDRQGRKMS 661
Query: 150 KSLGNVIDPLDVVKGISLAGLQGRLLQDSNLEAAERQRAADGQKRDYPQGIPECGTDALR 209
KSLGNV+DP D++ G L LQ + L+D NL+ E AA QK+D+P GIPECGTDALR
Sbjct: 662 KSLGNVLDPRDIISGQELQVLQAK-LRDGNLDPGELAVAAAAQKKDFPYGIPECGTDALR 720
Query: 210 FALAAY 215
FAL ++
Sbjct: 721 FALCSH 726
>sp|Q767M3|SYVM_PIG Valine--tRNA ligase, mitochondrial OS=Sus scrofa GN=VARS2 PE=3 SV=1
Length = 1062
Score = 291 bits (745), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 147/272 (54%), Positives = 192/272 (70%), Gaps = 7/272 (2%)
Query: 191 GQKRDYPQGIPECGTDALRFALAAYMSQGERTGRRKS-IGEKNPKGK---FVMVIPPPNV 246
G+K+D + +P + R+ AA+ R G K + P+ F M IPPPNV
Sbjct: 91 GEKKDVSRPLPPAYSP--RYVEAAWYPWWVREGFFKPEYQTRLPQATGETFSMCIPPPNV 148
Query: 247 TGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAGIATQVVVEKKLWREEKKTRHE 306
TG+LH+GHALT A++D++ RW+RM+G LW PG DHAGIATQ VVEKKLW+E R E
Sbjct: 149 TGSLHIGHALTVAIQDALVRWHRMRGDRVLWVPGSDHAGIATQAVVEKKLWKERGLRRRE 208
Query: 307 IGREKFIEKVWEWKKEKGDRIYEQMKLMGSSLDWDRACFTMDPKLSRAVTEAFVILHEAG 366
+ RE F+ +VW+WK+EKG I +Q++++G+SLDWDR CFTMD S AVTEAFV L++AG
Sbjct: 209 LSREDFLREVWKWKEEKGGEICQQLRVLGASLDWDRECFTMDAGSSVAVTEAFVRLYKAG 268
Query: 367 DIYRSERLVHWSCSLKSAISDIEVDKVELTGRTPLRVPGYANPVDFGVLASFAYKLD-DG 425
+YRS +LV+WSC+L+SAISDIEV+ L+GRT LR+PG PV FG+L S A+ +D +
Sbjct: 269 LLYRSRQLVNWSCALRSAISDIEVESRPLSGRTELRLPGCPTPVSFGLLVSVAFPVDGEP 328
Query: 426 SGEIVVATTRLETLFADVAVAVHPEDERYKHL 457
E+VV TTR ETL DVAVAVHP+D RY HL
Sbjct: 329 DAEVVVGTTRPETLPGDVAVAVHPDDARYTHL 360
Score = 195 bits (496), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 110/246 (44%), Positives = 143/246 (58%), Gaps = 37/246 (15%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
M E+A +AV +G L++ P H K W W + DWC+SRQLWWGHRIPAY V ++
Sbjct: 487 MGEQAAKAVVSGALELSPSFHQKNWQHWFSHIGDWCVSRQLWWGHRIPAYLVV----EER 542
Query: 61 PKNVTEYELWVSGRSKEEAEQKAISKFNVTQADISLRQDEDVLDTWFSSGLFPFSVFGWP 120
K TE + WV GR++ EA + A A+++L +D DVLDTWFSS LFPFS GWP
Sbjct: 543 AKGNTE-DCWVVGRTEAEAREVAAELTGRPGAELTLERDPDVLDTWFSSALFPFSALGWP 601
Query: 121 DK-------------------------------QRLSANGIHSEVFLHPIVRDAHGRKMS 149
+ +L+ S+V LH +VRD GRKMS
Sbjct: 602 QETPDLARFYPLSLLETGSDLLLFWVGRMVMLGTQLTGQLPFSKVLLHSMVRDRQGRKMS 661
Query: 150 KSLGNVIDPLDVVKGISLAGLQGRLLQDSNLEAAERQRAADGQKRDYPQGIPECGTDALR 209
KSLGNV+DP D++ G+ L LQ + L+D NL+ AE AA QK+D+P GIPECGTDALR
Sbjct: 662 KSLGNVLDPRDIINGVELQVLQEK-LRDGNLDPAELAIAAAAQKKDFPHGIPECGTDALR 720
Query: 210 FALAAY 215
F L ++
Sbjct: 721 FTLCSH 726
>sp|P07806|SYV_YEAST Valine--tRNA ligase, mitochondrial OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=VAS1 PE=1 SV=2
Length = 1104
Score = 291 bits (744), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 158/381 (41%), Positives = 220/381 (57%), Gaps = 68/381 (17%)
Query: 229 GEKNPKGKFVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAGIAT 288
G+ P+G F + PPPNVTG LH+GHALT A++DS+ R+NRMKGKT L+ PG DHAGIAT
Sbjct: 175 GKVKPEGVFCIPAPPPNVTGALHIGHALTIAIQDSLIRYNRMKGKTVLFLPGFDHAGIAT 234
Query: 289 QVVVEKKLWREEKKTRHEIGREKFIEKVWEWKKEKGDRIYEQMKLMGSSLDWDRACFTMD 348
Q VVEK++W +++KTRH+ GRE F+ KVWEWK+E RI Q++ +G+S DW R FT+
Sbjct: 235 QSVVEKQIWAKDRKTRHDYGREAFVGKVWEWKEEYHSRIKNQIQKLGASYDWSREAFTLS 294
Query: 349 PKLSRAVTEAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVDKVELTGRTPLRVPGYAN 408
P+L+++V EAFV LH+ G IYR+ RLV+WS L +AIS++EV+ ++ RT L VPGY
Sbjct: 295 PELTKSVEEAFVRLHDEGVIYRASRLVNWSVKLNTAISNLEVENKDVKSRTLLSVPGYDE 354
Query: 409 PVDFGVLASFAYKLDDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVDKVELTGRTP 468
V+FGVL SFAY + ++++ATTR ET+F D AVAVHP+D+RYKHL K P
Sbjct: 355 KVEFGVLTSFAYPVIGSDEKLIIATTRPETIFGDTAVAVHPDDDRYKHLHGKFIQHPFLP 414
Query: 469 LRVPGYANPVDFGVLASFAYKLEDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVGK 528
++P I+ ++ F AV + P +
Sbjct: 415 RKIP------------------------IITDKEAVDMEFGTGAVKITPAHD-------- 442
Query: 529 LLVHPFCERKIPILADSFVEKDFGTGAVKISPGHDHNDYEVAQRLNLPLITVFNEEGVII 588
+ D+ TG +R NL I + ++G++
Sbjct: 443 -------------------QNDYNTG----------------KRHNLEFINILTDDGLLN 467
Query: 589 GDYG-EFTGMKRFDARTRVTE 608
+ G E+ GMKRFDAR +V E
Sbjct: 468 EECGPEWQGMKRFDARKKVIE 488
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/250 (46%), Positives = 152/250 (60%), Gaps = 37/250 (14%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
MA+ A++ V+ G++ I P ++ WL N +DWCISRQLWWGHR P Y+++ +
Sbjct: 531 MAKDAIKVVRDGQITITPKSSEAEYFHWLGNIQDWCISRQLWWGHRCPVYFINIEG---E 587
Query: 61 PKNVTEYELWVSGRSKEEAEQKAISKFNVTQADISLRQDEDVLDTWFSSGLFPFSVFGWP 120
+ + + WV+GRS EEAE+KA +K+ + +L QDEDVLDTWFSSGL+PFS GWP
Sbjct: 588 EHDRIDGDYWVAGRSMEEAEKKAAAKY--PNSKFTLEQDEDVLDTWFSSGLWPFSTLGWP 645
Query: 121 DKQR-------------------------------LSANGIHSEVFLHPIVRDAHGRKMS 149
+K + L+ + EVF H +VRDA GRKMS
Sbjct: 646 EKTKDMETFYPFSMLETGWDILFFWVTRMILLGLKLTGSVPFKEVFCHSLVRDAQGRKMS 705
Query: 150 KSLGNVIDPLDVVKGISLAGLQGRLLQDSNLEAAERQRAADGQKRDYPQGIPECGTDALR 209
KSLGNVIDPLDV+ GI L L +LLQ NL+ E ++A GQK YP GIP+CGTDA+R
Sbjct: 706 KSLGNVIDPLDVITGIKLDDLHAKLLQ-GNLDPREVEKAKIGQKESYPNGIPQCGTDAMR 764
Query: 210 FALAAYMSQG 219
FAL AY + G
Sbjct: 765 FALCAYTTGG 774
>sp|Q5ST30|SYVM_HUMAN Valine--tRNA ligase, mitochondrial OS=Homo sapiens GN=VARS2 PE=1
SV=2
Length = 1063
Score = 289 bits (739), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 144/264 (54%), Positives = 186/264 (70%), Gaps = 10/264 (3%)
Query: 237 FVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAGIATQVVVEKKL 296
F M IPPPNVTG+LH+GHALT A++D++ RW+RM+G LW PG DHAGIATQ VVEK+L
Sbjct: 139 FSMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMRGDQVLWVPGSDHAGIATQAVVEKQL 198
Query: 297 WREEKKTRHEIGREKFIEKVWEWKKEKGDRIYEQMKLMGSSLDWDRACFTMDPKLSRAVT 356
W+E RHE+ RE F+ +VW+WK+ KG I EQ++ +G+SLDWDR CFTMD S AVT
Sbjct: 199 WKERGVRRHELSREAFLREVWQWKEAKGGEICEQLRALGASLDWDRECFTMDVGSSVAVT 258
Query: 357 EAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVDKVELTGRTPLRVPGYANPVDFGVLA 416
EAFV L++AG +YR+ +LV+WSC+L+SAISDIEV+ L G T LR+PG PV FG+L
Sbjct: 259 EAFVRLYKAGLLYRNHQLVNWSCALRSAISDIEVENRPLPGHTQLRLPGCPTPVSFGLLF 318
Query: 417 SFAYKLD-DGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVDKVELTGRTPLRVPGYA 475
S A+ +D + E+VV TTR ETL DVAVAVHP+D RY H L GR LR P
Sbjct: 319 SVAFPVDGEPDAEVVVGTTRPETLPGDVAVAVHPDDSRYTH------LHGRQ-LRHPLMG 371
Query: 476 NPVDFGVLASFAYKLEDGSGEIVV 499
P+ ++ +A + G+G + V
Sbjct: 372 QPLP--LITDYAVQPHVGTGAVKV 393
Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 108/250 (43%), Positives = 142/250 (56%), Gaps = 38/250 (15%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
M +A +AV++G L++ P H K W W + DWC+SRQLWWGH+IPAY V D A+
Sbjct: 487 MGARAAKAVESGALELSPSFHQKNWQHWFSHIGDWCVSRQLWWGHQIPAYLV-VEDHAQG 545
Query: 61 PKNVTEYELWVSGRSKEEAEQKAISKFNVTQADISLRQDEDVLDTWFSSGLFPFSVFGWP 120
E + WV GRS+ EA + A A+++L +D DVLDTWFSS LFPFS GWP
Sbjct: 546 -----EEDCWVVGRSEAEAREVAAELTGRPGAELTLERDPDVLDTWFSSALFPFSALGWP 600
Query: 121 DK-------------------------------QRLSANGIHSEVFLHPIVRDAHGRKMS 149
+ +L+ S+V LHP+VRD GRKMS
Sbjct: 601 QETPDLARFYPLSLLETGSDLLLFWVGRMVMLGTQLTGQLPFSKVLLHPMVRDRQGRKMS 660
Query: 150 KSLGNVIDPLDVVKGISLAGLQGRLLQDSNLEAAERQRAADGQKRDYPQGIPECGTDALR 209
KSLGNV+DP D++ G+ + LQ + L+ NL+ AE A QK+D+P GIPECGTDALR
Sbjct: 661 KSLGNVLDPRDIISGVEMQVLQEK-LRSGNLDPAELAIVAAAQKKDFPHGIPECGTDALR 719
Query: 210 FALAAYMSQG 219
F L ++ Q
Sbjct: 720 FTLCSHGVQA 729
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 94/156 (60%), Gaps = 2/156 (1%)
Query: 458 VDKVELTGRTPLRVPGYANPVDFGVLASFAYKLE-DGSGEIVVATTRLETLFADVAVAVH 516
V+ L G T LR+PG PV FG+L S A+ ++ + E+VV TTR ETL DVAVAVH
Sbjct: 292 VENRPLPGHTQLRLPGCPTPVSFGLLFSVAFPVDGEPDAEVVVGTTRPETLPGDVAVAVH 351
Query: 517 PEDERYKHLVGKLLVHPFCERKIPILADSFVEKDFGTGAVKISPGHDHNDYEVAQRLNLP 576
P+D RY HL G+ L HP + +P++ D V+ GTGAVK++P H D E+ R L
Sbjct: 352 PDDSRYTHLHGRQLRHPLMGQPLPLITDYAVQPHVGTGAVKVTPAHSPADAEMGARHGLS 411
Query: 577 LITVFNEEGVIIGDYGEF-TGMKRFDARTRVTELIS 611
+ V E+G + G++ G+ RF AR ++ ++S
Sbjct: 412 PLNVIAEDGTMTSLCGDWLQGLHRFVAREKIMSVLS 447
>sp|A4G1V2|SYV_HERAR Valine--tRNA ligase OS=Herminiimonas arsenicoxydans GN=valS PE=3
SV=1
Length = 969
Score = 287 bits (735), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 165/392 (42%), Positives = 216/392 (55%), Gaps = 70/392 (17%)
Query: 234 KGKFVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAGIATQVVVE 293
K F + +PPPNVTGTLHLGH + D +TR++RM+G T W PG DHAGIATQ+VVE
Sbjct: 34 KPSFSIQLPPPNVTGTLHLGHGFNQTIMDGLTRYHRMRGFNTAWIPGTDHAGIATQIVVE 93
Query: 294 KKLWREEKKTRHEIGREKFIEKVWEWKKEKGDRIYEQMKLMGSSLDWDRACFTMDPKLSR 353
++L +K TRH++GREKFIEKVWEWK++ G I QM+ +G+S DW R FTMD S+
Sbjct: 94 RQL-DAQKITRHDLGREKFIEKVWEWKEKSGSTITGQMRRLGTSPDWSREYFTMDEPRSK 152
Query: 354 AVTEAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVDKVELTGRTPLRVPGYANPVDFG 413
VTE FV L E G IYR +RLV+W L +A+SD+EV E G
Sbjct: 153 VVTEVFVRLVEQGLIYRGKRLVNWDPVLGTAVSDLEVVSEEEDGH--------------- 197
Query: 414 VLASFAYKLDDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVDKVELTGRTPLRVPG 473
+ + Y L DGS T + + + A E+ +
Sbjct: 198 -MWNIRYPLADGS------TYKFPIAYDEAGNATEWEERNF------------------- 231
Query: 474 YANPVDFGVLASFAYKLEDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVGKLLVHP 533
IVVATTR ET+ DVAVAV P+DERY HLVGKLL P
Sbjct: 232 -----------------------IVVATTRPETMLGDVAVAVDPDDERYTHLVGKLLTLP 268
Query: 534 FCERKIPILADSFVEKDFGTGAVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDY-G 592
C+R IPI+AD +V+K+FGTG VKI+P HD NDY V QR NL I++ + I
Sbjct: 269 LCDRAIPIIADDYVDKEFGTGCVKITPAHDFNDYAVGQRHNLDKISILTLDAKINEHAPA 328
Query: 593 EFTGMKRFDARTRVTELISLSISSQGLIKVDK 624
+ GM R+ AR ++ + +QGL+++ K
Sbjct: 329 AYQGMDRYAARKQIVA----DLDAQGLLELVK 356
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/254 (37%), Positives = 140/254 (55%), Gaps = 57/254 (22%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
+ E A++ V +GE+K++P++ T+ QWL N +DWCISRQLWWGH+IPA+Y S
Sbjct: 399 ITEVALEKVASGEVKLLPENWANTYNQWLNNIQDWCISRQLWWGHQIPAWYDS------- 451
Query: 61 PKNVTEYELWVSGRSKEEAEQKAISKFNVTQADISLRQDEDVLDTWFSSGLFPFSVFGWP 120
E +++V+ R++EEA KA ++ L +DEDVLDTWFSS L PFS GWP
Sbjct: 452 -----EGKVYVA-RNEEEARTKAAAQ----GYHGPLTRDEDVLDTWFSSALVPFSTLGWP 501
Query: 121 DKQ------------------------RLSANGIH-------SEVFLHPIVRDAHGRKMS 149
++ R+ H + V++H ++RD+ G+KMS
Sbjct: 502 EETPDFKNFLPSSVLVTGFDIIFFWVARMVMMTTHFTGKVPFNTVYVHGLIRDSSGQKMS 561
Query: 150 KSLGNVIDPLDVVKGISLAGLQGR----LLQDSNLEAAERQRAADGQKRDYPQGIPECGT 205
KS GN +DP+D++ GIS+ L + L+ + E+ +++YP GI GT
Sbjct: 562 KSKGNTLDPIDLIDGISVEDLVAKRTVGLMNPKQAASIEK-----ATRKEYPNGIAAYGT 616
Query: 206 DALRFALAAYMSQG 219
DALRF +A+Y S G
Sbjct: 617 DALRFTMASYASLG 630
>sp|A6SUQ8|SYV_JANMA Valine--tRNA ligase OS=Janthinobacterium sp. (strain Marseille)
GN=valS PE=3 SV=1
Length = 965
Score = 285 bits (730), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 163/392 (41%), Positives = 217/392 (55%), Gaps = 70/392 (17%)
Query: 234 KGKFVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAGIATQVVVE 293
K F + +PPPNVTGTLHLGH + D +TR++RM+G T W PG DHAGIATQ+VVE
Sbjct: 34 KPAFSIQLPPPNVTGTLHLGHGFNQTIMDGLTRYHRMRGFNTAWIPGTDHAGIATQIVVE 93
Query: 294 KKLWREEKKTRHEIGREKFIEKVWEWKKEKGDRIYEQMKLMGSSLDWDRACFTMDPKLSR 353
++L +K TRH++GREKF+EKVWEWK++ G I Q++ +G+S DW R FTMD S+
Sbjct: 94 RQL-DAQKITRHDLGREKFVEKVWEWKEKSGSTITGQIRRLGASPDWSREYFTMDEPRSK 152
Query: 354 AVTEAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVDKVELTGRTPLRVPGYANPVDFG 413
VTE FV L E G IYR +RLV+W L +A+SD+EV E G+
Sbjct: 153 TVTEVFVRLVEQGLIYRGKRLVNWDPVLGTAVSDLEVVSEEEDGQ--------------- 197
Query: 414 VLASFAYKLDDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVDKVELTGRTPLRVPG 473
+ + Y L DGS + + F + A E+ +
Sbjct: 198 -MWNIRYPLADGS------SYKFPIAFDEAGNATEWEERNF------------------- 231
Query: 474 YANPVDFGVLASFAYKLEDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVGKLLVHP 533
IVVATTR ET+ DVAVAV P D RY+HLVGKLL P
Sbjct: 232 -----------------------IVVATTRPETMLGDVAVAVDPTDTRYQHLVGKLLTLP 268
Query: 534 FCERKIPILADSFVEKDFGTGAVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDY-G 592
CER IPI+AD +V+K+FGTG VKI+P HD NDY V QR NL I++ + I +
Sbjct: 269 LCERTIPIIADDYVDKEFGTGCVKITPAHDFNDYAVGQRHNLDKISILTLDAKINENAPA 328
Query: 593 EFTGMKRFDARTRVTELISLSISSQGLIKVDK 624
+ G+ RF AR ++ + +QGL+++ K
Sbjct: 329 AYQGLDRFAARKQIVA----DLDAQGLLELVK 356
Score = 159 bits (401), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/254 (36%), Positives = 140/254 (55%), Gaps = 57/254 (22%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
+ E A++ V GE+K++P++ T T+ QWL N +DWCISRQLWWGH+IPA+Y S
Sbjct: 399 ITEVALEKVANGEIKMLPENWTNTYNQWLNNIQDWCISRQLWWGHQIPAWYDS------- 451
Query: 61 PKNVTEYELWVSGRSKEEAEQKAISKFNVTQADISLRQDEDVLDTWFSSGLFPFSVFGWP 120
E +++V+ R+++EA+ KA + + L +DEDVLDTWFSS L PFS GWP
Sbjct: 452 -----EGKVYVA-RNEDEAKAKATA----AGYNGPLTRDEDVLDTWFSSALVPFSTLGWP 501
Query: 121 DKQ------------------------RLSANGIH-------SEVFLHPIVRDAHGRKMS 149
++ R+ H V++H ++RD+ G+KMS
Sbjct: 502 EETPDFKTFLPSSVLVTGFDIIFFWVARMVMMTTHFTGKVPFKTVYVHGLIRDSSGQKMS 561
Query: 150 KSLGNVIDPLDVVKGISLAGLQGR----LLQDSNLEAAERQRAADGQKRDYPQGIPECGT 205
KS GN +DP+D++ GI++ L + L+ + E+ ++++P GI GT
Sbjct: 562 KSKGNTLDPIDLIDGINVDELVAKRTVGLMNPKQAASIEK-----STRKEFPAGISAYGT 616
Query: 206 DALRFALAAYMSQG 219
DALRF +A+Y S G
Sbjct: 617 DALRFTMASYASLG 630
>sp|B2FMS2|SYV_STRMK Valine--tRNA ligase OS=Stenotrophomonas maltophilia (strain K279a)
GN=valS PE=3 SV=1
Length = 942
Score = 285 bits (729), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 166/401 (41%), Positives = 221/401 (55%), Gaps = 77/401 (19%)
Query: 220 ERTGRRKSIGEKNPKGKFVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNP 279
E+ G K G P + +++PPPNVTGTLH+GHA + D++ R++RM+G TLW
Sbjct: 22 EKAGHFKPSGTGEP---YTILLPPPNVTGTLHMGHAFQQTLMDALVRYHRMRGYDTLWQV 78
Query: 280 GCDHAGIATQVVVEKKLWREEK-KTRHEIGREKFIEKVWEWKKEKGDRIYEQMKLMGSSL 338
G DHAGIAT++VV + L E K +TR +GRE FI KVWEWK++ GD I QM+ +G+S
Sbjct: 79 GTDHAGIATEMVVSRNLALEGKGETRDSLGREGFIGKVWEWKQQSGDTIERQMRRLGTSA 138
Query: 339 DWDRACFTMDPKLSRAVTEAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVDKVELTGR 398
DW R+ FTMDP+ S AV EAFV +E G IYR +RLV+W LK+AISD+EV+ E
Sbjct: 139 DWSRSTFTMDPQPSAAVNEAFVRWYEQGLIYRGQRLVNWDPVLKTAISDLEVESAE---- 194
Query: 399 TPLRVPGYANPVDFGVLASFAYKLDDGSGEIVVATTRLETLFADVAVAVHPEDERYKHL- 457
+ G L S AY LD+G Y+H+
Sbjct: 195 ------------EDGFLWSIAYTLDEGLS--------------------------YEHVE 216
Query: 458 --VDKVELTGRTPLRVPGYANPVDFGVLASFAYKLEDGSGEIVVATTRLETLFADVAVAV 515
D VE L + +VVATTR ETL D AV V
Sbjct: 217 RDADGVE--------------------------TLRETRDYLVVATTRPETLLGDTAVMV 250
Query: 516 HPEDERYKHLVGKLLVHPFCERKIPILADSFVEKDFGTGAVKISPGHDHNDYEVAQRLNL 575
HPED+RY HL+GK +V P R++P++AD +V++ FGTG VK++P HD NDYEV R +L
Sbjct: 251 HPEDKRYAHLIGKSVVLPLTGRRVPVIADDYVDRAFGTGVVKVTPAHDFNDYEVGVRHSL 310
Query: 576 PLITVFNEEGVIIGDYGE-FTGMKRFDARTRV-TELISLSI 614
P+I +F + + E F G+ R+ AR V EL L I
Sbjct: 311 PMINLFTPVAALNENAPERFQGLDRYAARKAVLAELEDLGI 351
Score = 142 bits (359), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 89/258 (34%), Positives = 134/258 (51%), Gaps = 61/258 (23%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
+A++ ++ V+ G + +P + T+ W+ N +DWCISRQLWWGHRIPA++ D A
Sbjct: 387 LAKRGLELVEDGSISFVPPNWINTYRHWMNNIQDWCISRQLWWGHRIPAWF----DEATG 442
Query: 61 PKNVTEYELWVSGRSKEEAEQKAISKFNVTQADISLRQDEDVLDTWFSSGLFPFSVFGWP 120
V GRS+EE +K N+ +D+ L Q+ DVL+TWFSS L+PFS GWP
Sbjct: 443 SCYV--------GRSEEEVR----AKHNLG-SDVVLNQESDVLETWFSSQLWPFSTLGWP 489
Query: 121 DKQRLSANGI-----------------------------------HSEVFLHPIVRDAHG 145
++Q ++ G +V+ ++RD G
Sbjct: 490 NEQAMAERGFDRYLPSSVLITGFDIIFFWVARMIMATDNLVGKIPFKDVYFTGLIRDGQG 549
Query: 146 RKMSKSLGNVIDPLDVVKGISLAGL----QGRLLQDSNLEAAERQRAADGQKRDYPQGIP 201
+KMSKS GNV+DPLD++ GI++ L G L+Q +E E+ ++++P GI
Sbjct: 550 QKMSKSKGNVLDPLDIIDGITIDDLVAKRTGGLMQPKMVEKIEK-----ATRKEFPDGIA 604
Query: 202 ECGTDALRFALAAYMSQG 219
G DALRF +AA + G
Sbjct: 605 AHGADALRFTIAALATHG 622
>sp|P28350|SYV_NEUCR Valine--tRNA ligase, mitochondrial OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=cyt-20 PE=1 SV=1
Length = 1093
Score = 283 bits (724), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 138/249 (55%), Positives = 168/249 (67%), Gaps = 1/249 (0%)
Query: 213 AAYMSQGERTGRRKSIGEKNPK-GKFVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMK 271
AA+ E+ G K + P GKFV+ +PPPNVTG LH GHAL N+++D++ RW RMK
Sbjct: 147 AAWYQWWEKAGYFKPESCRKPSAGKFVIPLPPPNVTGALHCGHALANSLQDTLIRWYRMK 206
Query: 272 GKTTLWNPGCDHAGIATQVVVEKKLWREEKKTRHEIGREKFIEKVWEWKKEKGDRIYEQM 331
G TLW PGCDHAGI+TQ VVEK LW++EKK R E+GREKF + VWEWK E RI
Sbjct: 207 GYETLWVPGCDHAGISTQSVVEKMLWKKEKKIRQELGREKFTDLVWEWKGEYHQRINNAQ 266
Query: 332 KLMGSSLDWDRACFTMDPKLSRAVTEAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVD 391
KLMG S+DW R FTMD L+ A E F LH+ G IYRS RLV+W L +A+S +EV+
Sbjct: 267 KLMGGSMDWSREAFTMDKNLTAATMETFCRLHDEGLIYRSNRLVNWCTHLNTALSGLEVE 326
Query: 392 KVELTGRTPLRVPGYANPVDFGVLASFAYKLDDGSGEIVVATTRLETLFADVAVAVHPED 451
E+TGRT L VPGY V+FGVL F Y++D I VATTR ET+ D +AV+PED
Sbjct: 327 TKEITGRTLLDVPGYDKKVEFGVLTHFKYQIDGSEETIEVATTRPETMLGDTGIAVNPED 386
Query: 452 ERYKHLVDK 460
RY HLV K
Sbjct: 387 PRYTHLVGK 395
Score = 211 bits (538), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 111/251 (44%), Positives = 147/251 (58%), Gaps = 37/251 (14%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
M E A+Q V+ G++KI P+ TK++ +WL + +DWCISRQLWWGHRIPAY V F +
Sbjct: 518 MGEAALQVVEEGKVKISPESATKSYKRWLADIQDWCISRQLWWGHRIPAYRVIFEGEEGQ 577
Query: 61 PKNVTEYELWVSGRSKEEAEQKAISKFNVTQADISLRQDEDVLDTWFSSGLFPFSVFGWP 120
+N E WV GR++EEA+ KA +KF +L QD D LDTWFSSGL+P ++ GWP
Sbjct: 578 REN--EKSEWVVGRTQEEAQAKAEAKF--AGRKFTLEQDPDCLDTWFSSGLWPMAILGWP 633
Query: 121 DKQRLSANGIH--------------------------------SEVFLHPIVRDAHGRKM 148
+ + L +EV+ H ++RD+ GRKM
Sbjct: 634 NTENLDFKKFFPTSMLETGWDILFFWVSRMIMLSLKMTGEVPFTEVYCHSLIRDSEGRKM 693
Query: 149 SKSLGNVIDPLDVVKGISLAGLQGRLLQDSNLEAAERQRAADGQKRDYPQGIPECGTDAL 208
SKSLGNVIDPLD+++GI L L +LL NL+ E RA QK +P GIPECG DA+
Sbjct: 694 SKSLGNVIDPLDIIRGIELEDLHAKLLV-GNLKEEEVARATKYQKTAFPGGIPECGADAM 752
Query: 209 RFALAAYMSQG 219
RF L +Y + G
Sbjct: 753 RFTLLSYTTGG 763
Score = 173 bits (438), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/158 (52%), Positives = 107/158 (67%), Gaps = 1/158 (0%)
Query: 458 VDKVELTGRTPLRVPGYANPVDFGVLASFAYKLEDGSGEIVVATTRLETLFADVAVAVHP 517
V+ E+TGRT L VPGY V+FGVL F Y+++ I VATTR ET+ D +AV+P
Sbjct: 325 VETKEITGRTLLDVPGYDKKVEFGVLTHFKYQIDGSEETIEVATTRPETMLGDTGIAVNP 384
Query: 518 EDERYKHLVGKLLVHPFCERKIPILADSFVEKDFGTGAVKISPGHDHNDYEVAQRLNLPL 577
ED RY HLVGK HPF +R +PI+ D++V+K+FGTGAVK++P HD NDY++ QR NL
Sbjct: 385 EDPRYTHLVGKFARHPFVDRLLPIVTDNYVDKEFGTGAVKLTPAHDFNDYQLGQRHNLEF 444
Query: 578 ITVFNEEGVIIGDYGEFTGMKRFDAR-TRVTELISLSI 614
I + NE G + + G F G KRFDAR T V EL L +
Sbjct: 445 INILNENGTLNDNAGPFKGQKRFDARYTVVEELTKLGL 482
>sp|Q8UEN6|SYV_AGRT5 Valine--tRNA ligase OS=Agrobacterium tumefaciens (strain C58 / ATCC
33970) GN=valS PE=3 SV=1
Length = 947
Score = 280 bits (717), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 158/392 (40%), Positives = 208/392 (53%), Gaps = 82/392 (20%)
Query: 237 FVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAGIATQVVVEKKL 296
F +VIPPPNVTG+LH+GHAL N ++D + R+ RM+GK LW PG DHAGIATQ+VVE+KL
Sbjct: 38 FTIVIPPPNVTGSLHMGHALNNTLQDILVRFERMRGKDVLWQPGMDHAGIATQMVVERKL 97
Query: 297 WREEKKTRHEIGREKFIEKVWEWKKEKGDRIYEQMKLMGSSLDWDRACFTMDPKLSRAVT 356
+ R E+GRE F+EKVWEWK E G I+ Q+K +G+S DW R FTMD LS AV
Sbjct: 98 MENQLPGRREMGREAFVEKVWEWKAESGGLIFNQLKRLGASCDWSRERFTMDEGLSEAVL 157
Query: 357 EAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVDKVELTGRTPLRVPGYANPVDFGVLA 416
E FV L++ IY+++RLV+W L++AISD+EV+++E+ G L
Sbjct: 158 EVFVTLYKQNLIYKAKRLVNWDPKLQTAISDMEVEQIEVKGN----------------LW 201
Query: 417 SFAYKLDDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVDKVELTGRTPLRVPGYAN 476
F Y L+ G +T P+
Sbjct: 202 HFRYPLEKG-------------------------------------VTYEYPVAFDADGT 224
Query: 477 PVDFGVLASFAYKLEDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVGKLLVHPFCE 536
P +F + IVVATTR ET+ D VAV+PEDERYK +VGK ++ P
Sbjct: 225 PTEF-----------ETRDYIVVATTRPETMLGDTGVAVNPEDERYKGIVGKHVILPIVG 273
Query: 537 RKIPILADSFVEKDFGTGAVKISPGHDHNDYEVAQRLNLPLITVFNEEGVII-------- 588
RKIPI+AD + + GTGAVKI+P HD ND+EV +R L I V N +G I
Sbjct: 274 RKIPIVADDYADPTAGTGAVKITPAHDFNDFEVGKRCGLRAINVMNIDGTISIKENEDFL 333
Query: 589 ----------GDYGEFTGMKRFDARTRVTELI 610
G + G RF AR + E+
Sbjct: 334 EGLSHPAALHGAWDRLEGQDRFTARKIIVEIF 365
Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 134/322 (41%), Gaps = 107/322 (33%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
+A+ A+ +V+ G +P + T++QW+EN + WCISRQLWWGH+IPA+Y
Sbjct: 406 LAQPAIASVREGRTNFVPKNWENTYFQWMENIQPWCISRQLWWGHQIPAWY--------G 457
Query: 61 PKNVTEYELWVSGRSKEEAEQKAISKF----------------NVTQADISLRQDEDVLD 104
P E +++EEA Q AI + N +I L +DEDVLD
Sbjct: 458 PDGQVFVE-----KTEEEALQAAIQHYIAHEGPWKAWVEEKLENFAPGEI-LTRDEDVLD 511
Query: 105 TWFSSGLFPFSVFGWPDKQ------------------------RLSANGIH--------- 131
TWFSS L+PFS GWP++ R+ G+H
Sbjct: 512 TWFSSALWPFSTLGWPEQTPELARYYPTNVLVTGFDIIPFWVVRMMQMGLHFMKDDAGNP 571
Query: 132 ----SEVFLHPIVRDAHGRKMSKSLGNVIDPLDVVKGISLAGLQGRLLQDSNLEAAERQR 187
S V++H +VRD +G+KMSKS GNVIDPL++
Sbjct: 572 VEPFSTVYIHALVRDKNGQKMSKSKGNVIDPLEL-------------------------- 605
Query: 188 AADGQKRDYPQGIPECGTDALRFALAAYMSQGE--RTGRRKSIGEKNPKGKFVMVIPPPN 245
I E G DALRF LA +QG + + G +N K
Sbjct: 606 ------------IDEYGADALRFTLAIMAAQGRDVKLDPARIAGYRNFGTKLWNATRFAE 653
Query: 246 VTGTLHLGHALTNAVEDSITRW 267
+ G H L +I RW
Sbjct: 654 MNGVKRDPHFLAETASLTINRW 675
>sp|O75005|SYV_SCHPO Valine--tRNA ligase OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=vas2 PE=3 SV=1
Length = 980
Score = 278 bits (712), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 132/229 (57%), Positives = 167/229 (72%)
Query: 229 GEKNPKGKFVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAGIAT 288
G+ +G FV+ PPPNVTG LH+GHALT A++DS+ RWNRM GKT L+ G DHAG++T
Sbjct: 124 GKPKKEGVFVITSPPPNVTGALHIGHALTIAIQDSLARWNRMLGKTVLFLGGFDHAGLST 183
Query: 289 QVVVEKKLWREEKKTRHEIGREKFIEKVWEWKKEKGDRIYEQMKLMGSSLDWDRACFTMD 348
Q VVEKKLW +KKTRH+ R+KF++ VWEWK+E +RI QM +G S DW R FTMD
Sbjct: 184 QSVVEKKLWYTQKKTRHDYPRDKFVDIVWEWKEEYHNRIKNQMSRLGGSFDWTREAFTMD 243
Query: 349 PKLSRAVTEAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVDKVELTGRTPLRVPGYAN 408
LSRAV E FV LHE IYR+ RLV+W +L++ +S++EV+ V++ GRT L+VPGY
Sbjct: 244 ENLSRAVVETFVRLHEENIIYRANRLVNWCTALQTTLSNLEVENVDVPGRTLLKVPGYDE 303
Query: 409 PVDFGVLASFAYKLDDGSGEIVVATTRLETLFADVAVAVHPEDERYKHL 457
PV+ GVL S AY ++ IV+ATTR ETL D AVAVHP+D RYKHL
Sbjct: 304 PVEVGVLTSIAYAVEGSDERIVIATTRPETLLGDTAVAVHPQDPRYKHL 352
Score = 223 bits (567), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 153/250 (61%), Gaps = 36/250 (14%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
MA A + VK+GE++I PD + + +W+EN +DWCISRQLWWGHRIPAY+V+ D +
Sbjct: 479 MAAAAAEVVKSGEIEIAPDMSRREFIRWMENIQDWCISRQLWWGHRIPAYFVNLADEPSQ 538
Query: 61 PKNVTEYELWVSGRSKEEAEQKAISKFNVTQADISLRQDEDVLDTWFSSGLFPFSVFGWP 120
++ Y WV+GR+ E+AE+KA + F +L QDEDVLDTWFSSGL+PFS GWP
Sbjct: 539 DRSEGRY--WVTGRTLEQAEEKAKAAF--PGKSFTLEQDEDVLDTWFSSGLWPFSTLGWP 594
Query: 121 DKQ-------------------------------RLSANGIHSEVFLHPIVRDAHGRKMS 149
+L+ VF H +VRDA GRKMS
Sbjct: 595 KDTSDYENFYPTTLMETGWDILFFWIARMVMLGLKLTGKIPFKRVFCHALVRDAQGRKMS 654
Query: 150 KSLGNVIDPLDVVKGISLAGLQGRLLQDSNLEAAERQRAADGQKRDYPQGIPECGTDALR 209
KSLGNV+DP+DV++GISL L +LL NL++ E ++A GQ+ YP+GIP+CGTDALR
Sbjct: 655 KSLGNVVDPIDVIEGISLQALHDKLLV-GNLDSREVEKAKKGQRLSYPKGIPQCGTDALR 713
Query: 210 FALAAYMSQG 219
F L + + G
Sbjct: 714 FTLCSLTTGG 723
Score = 183 bits (464), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 87/152 (57%), Positives = 108/152 (71%), Gaps = 1/152 (0%)
Query: 458 VDKVELTGRTPLRVPGYANPVDFGVLASFAYKLEDGSGEIVVATTRLETLFADVAVAVHP 517
V+ V++ GRT L+VPGY PV+ GVL S AY +E IV+ATTR ETL D AVAVHP
Sbjct: 285 VENVDVPGRTLLKVPGYDEPVEVGVLTSIAYAVEGSDERIVIATTRPETLLGDTAVAVHP 344
Query: 518 EDERYKHLVGKLLVHPFCERKIPILADS-FVEKDFGTGAVKISPGHDHNDYEVAQRLNLP 576
+D RYKHL GK + HPFC R IPI+ D V+ +FGTGAVKI+P HD NDYEV +R NL
Sbjct: 345 QDPRYKHLHGKFVKHPFCNRSIPIICDDIIVDMEFGTGAVKITPAHDPNDYEVGKRHNLE 404
Query: 577 LITVFNEEGVIIGDYGEFTGMKRFDARTRVTE 608
I +F ++G++ + GEF GMKRF AR +V E
Sbjct: 405 FINIFTDDGLLNENCGEFAGMKRFTARVKVVE 436
>sp|B9KMT9|SYV_RHOSK Valine--tRNA ligase OS=Rhodobacter sphaeroides (strain KD131 / KCTC
12085) GN=valS PE=3 SV=1
Length = 987
Score = 278 bits (711), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 168/467 (35%), Positives = 236/467 (50%), Gaps = 83/467 (17%)
Query: 220 ERTGRRKSIGEKNPKGKFVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNP 279
E+ G ++ + F ++IPPPNVTG+LH+GHA N ++D +TRW+RM+G TLW P
Sbjct: 21 EKAGAFRAGANASRPETFCIMIPPPNVTGSLHMGHAFNNTLQDILTRWHRMRGFDTLWQP 80
Query: 280 GCDHAGIATQVVVEKKLWREEKKTRHEIGREKFIEKVWEWKKEKGDRIYEQMKLMGSSLD 339
G DHAGIATQ+VVE++L R R E+GRE F+EKVWEWK++ G I Q+K +G+S D
Sbjct: 81 GQDHAGIATQMVVERELARAGNPGRREMGREAFLEKVWEWKEQSGGTIVNQLKRLGASCD 140
Query: 340 WDRACFTMDPKLSRAVTEAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVDKVELTGRT 399
W R FTMDP RAV + FV L+E G IYR +RLV+W ++AISD+EV++VE+ G
Sbjct: 141 WSRNAFTMDPNFQRAVLKVFVDLYEKGFIYRGKRLVNWDPHFETAISDLEVEQVEVNGN- 199
Query: 400 PLRVPGYANPVDFGVLASFAYKLDDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVD 459
+ Y+L DG+
Sbjct: 200 ---------------MWRLRYRLADGA--------------------------------- 211
Query: 460 KVELTGRTPLRVPGYANPVDFGVLASFAYKLEDGSGEIVVATTRLETLFADVAVAVHPED 519
T R P+ P D+ + + VATTR ET+ D +AV+P D
Sbjct: 212 ----TYRHPVAFDEEGRPTDW-----------EERDYLTVATTRPETMLGDTGIAVNPSD 256
Query: 520 ERYKHLVGKLLVHPFCERKIPILADSFVEKDFGTGAVKISPGHDHNDYEVAQRLNLPLIT 579
ERY HL+GK +V P R+IPI+AD + + GTGAVKI+P HD ND+ V QR L I
Sbjct: 257 ERYAHLIGKEVVLPLVGRRIPIVADDYADPSKGTGAVKITPAHDFNDWGVGQRTGLRAIN 316
Query: 580 VFNEEGVII----GDYGE----------FTGMKRFDARTRVTELISLSISSQGLIKVDKE 625
V + D+ E G+ R++AR RV ++L+ L +D++
Sbjct: 317 VMTGRATMFLIENPDFTEGCAPSEEALALDGLDRYEARKRV---VALAEEQGWLDGIDQD 373
Query: 626 IERLNKKEEYLKQVIAKLKDQAAAEDYATKVP--ENVRTQNSEKLSE 670
+ + + L DQ + P + VRT +E L E
Sbjct: 374 RHMVPHGDRSKVAIEPMLTDQWFVDTAQIIQPAIDAVRTGRTEILPE 420
Score = 110 bits (274), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 106/246 (43%), Gaps = 86/246 (34%)
Query: 3 EKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYY------VSFND 56
+ A+ AV+TG +I+P+ KT++ WLEN WCISRQLWWGH+IP +Y F D
Sbjct: 404 QPAIDAVRTGRTEILPERDAKTYFHWLENIEPWCISRQLWWGHQIPVWYGLDIWPARFED 463
Query: 57 PAKKPKNVTE-YELWVSG------------------------------------RSKEEA 79
+ E +EL G R E A
Sbjct: 464 DGDDTLDEVEIFELLEDGAFNHADPTHHCAFDFEGVSEKFLDDLASLPHPLNNARVIEVA 523
Query: 80 EQ-KAISKFNVTQADISLRQ-----------DEDVLDTWFSSGLFPFSVFGWPDK----- 122
+ +AI + AD +L + D DVLDTWFSSGL+P GWP++
Sbjct: 524 SRAEAIDRLAQALADYNLNEDPTHLVYPVWRDPDVLDTWFSSGLWPIGTLGWPEETPELA 583
Query: 123 -------------------------QRLSANGI-HSEVFLHPIVRDAHGRKMSKSLGNVI 156
Q N + V++H +VRD G+KMSKSLGNV+
Sbjct: 584 RYFPTNVLITGFDIIFFWVARMMMMQLAVVNEVPFKTVYVHALVRDEKGKKMSKSLGNVL 643
Query: 157 DPLDVV 162
DPL+++
Sbjct: 644 DPLELI 649
Score = 41.6 bits (96), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%)
Query: 602 ARTRVTELISLSISSQGLIKVDKEIERLNKKEEYLKQVIAKLKDQAAAEDYATKVPENVR 661
A T E S +I +G+I + E RL K E L++ +A L+ + ++ PE V
Sbjct: 900 ALTIAVEGGSFAIPLEGVIDIGAEKARLAKTLEKLEKDMAGLRGRLNNPNFVASAPEEVV 959
Query: 662 TQNSEKLSEAEGELSRLPAALAALKLI 688
+ +L + E E ++L AALA L I
Sbjct: 960 DEARTRLEQGEEERAKLSAALARLSEI 986
>sp|A3PHJ6|SYV_RHOS1 Valine--tRNA ligase OS=Rhodobacter sphaeroides (strain ATCC 17029 /
ATH 2.4.9) GN=valS PE=3 SV=1
Length = 987
Score = 278 bits (711), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 169/467 (36%), Positives = 236/467 (50%), Gaps = 83/467 (17%)
Query: 220 ERTGRRKSIGEKNPKGKFVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNP 279
E+ G ++ + F ++IPPPNVTG+LH+GHA N ++D +TRW+RM+G TLW P
Sbjct: 21 EKAGAFRAGANASRPETFCIMIPPPNVTGSLHMGHAFNNTLQDILTRWHRMRGFDTLWQP 80
Query: 280 GCDHAGIATQVVVEKKLWREEKKTRHEIGREKFIEKVWEWKKEKGDRIYEQMKLMGSSLD 339
G DHAGIATQ+VVE++L R R E+GRE F+EKVWEWK++ G I Q+K +G+S D
Sbjct: 81 GQDHAGIATQMVVERELARAGNPGRREMGREAFLEKVWEWKEQSGGTIVNQLKRLGASCD 140
Query: 340 WDRACFTMDPKLSRAVTEAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVDKVELTGRT 399
W R FTMDP RAV + FV L+E G IYR +RLV+W ++AISD+EV++VE+ G
Sbjct: 141 WSRNAFTMDPNFQRAVLKVFVDLYEKGFIYRGKRLVNWDPHFETAISDLEVEQVEVNGN- 199
Query: 400 PLRVPGYANPVDFGVLASFAYKLDDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVD 459
+ Y+L DG AT R F + E+ Y
Sbjct: 200 ---------------MWRLRYQLADG------ATYRHPVAFDEEGRPTEWEERDY----- 233
Query: 460 KVELTGRTPLRVPGYANPVDFGVLASFAYKLEDGSGEIVVATTRLETLFADVAVAVHPED 519
+ VATTR ET+ D +AV+P D
Sbjct: 234 -------------------------------------LTVATTRPETMLGDTGIAVNPSD 256
Query: 520 ERYKHLVGKLLVHPFCERKIPILADSFVEKDFGTGAVKISPGHDHNDYEVAQRLNLPLIT 579
ERY HL+GK +V P R+IPI+AD + + GTGAVKI+P HD ND+ V QR L I
Sbjct: 257 ERYAHLIGKEVVLPLVGRRIPIVADDYADPSKGTGAVKITPAHDFNDWGVGQRTGLRAIN 316
Query: 580 VFNEEGVII----GDYGE----------FTGMKRFDARTRVTELISLSISSQGLIKVDKE 625
V + + D+ E G+ R++AR RV ++L+ L +D++
Sbjct: 317 VMSGRATMFLIENPDFTEGCAPSEEALALDGLDRYEARKRV---VALAEEQGWLDGIDQD 373
Query: 626 IERLNKKEEYLKQVIAKLKDQAAAEDYATKVP--ENVRTQNSEKLSE 670
+ + + L DQ + P + VRT +E L E
Sbjct: 374 RHMVPHGDRSKVAIEPMLTDQWFVDTAQIVQPAIDAVRTGRTEILPE 420
Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 107/248 (43%), Gaps = 86/248 (34%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYY------VSF 54
+ + A+ AV+TG +I+P+ KT++ WLEN WCISRQLWWGH+IP +Y F
Sbjct: 402 IVQPAIDAVRTGRTEILPERDAKTYFHWLENIEPWCISRQLWWGHQIPVWYGLDIWPARF 461
Query: 55 NDPAKKPKNVTE-YELWVSG------------------------------------RSKE 77
D + E +EL G R E
Sbjct: 462 EDDGDDTLDEVEIFELLEDGAFNHADPTHHCAFDFEGVSEKFLDDLASLPHPLNNARVVE 521
Query: 78 EAEQ-KAISKFNVTQADISLRQ-----------DEDVLDTWFSSGLFPFSVFGWPDK--- 122
A + +AI + AD +L + D DVLDTWFSSGL+P GWP++
Sbjct: 522 VASRAEAIDRLAQALADYNLNEDPTHLVYPVWRDPDVLDTWFSSGLWPIGTLGWPEETPE 581
Query: 123 ---------------------------QRLSANGI-HSEVFLHPIVRDAHGRKMSKSLGN 154
Q N + V++H +VRD G+KMSKSLGN
Sbjct: 582 LARYFPTNVLITGFDIIFFWVARMMMMQLAVVNEVPFKTVYVHALVRDEKGKKMSKSLGN 641
Query: 155 VIDPLDVV 162
V+DPL+++
Sbjct: 642 VLDPLELI 649
Score = 41.6 bits (96), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%)
Query: 602 ARTRVTELISLSISSQGLIKVDKEIERLNKKEEYLKQVIAKLKDQAAAEDYATKVPENVR 661
A T E S +I +G+I + E RL K E L++ +A L+ + ++ PE V
Sbjct: 900 ALTIAVEGGSFAIPLEGVIDIGAEKARLAKTLEKLEKDMAGLRGRLGNPNFVASAPEEVV 959
Query: 662 TQNSEKLSEAEGELSRLPAALAALKLI 688
+ +L + E E ++L AALA L I
Sbjct: 960 DEARTRLEQGEEEGAKLSAALARLSEI 986
>sp|Q3J4Z5|SYV_RHOS4 Valine--tRNA ligase OS=Rhodobacter sphaeroides (strain ATCC 17023 /
2.4.1 / NCIB 8253 / DSM 158) GN=valS PE=3 SV=1
Length = 987
Score = 277 bits (708), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 168/467 (35%), Positives = 237/467 (50%), Gaps = 83/467 (17%)
Query: 220 ERTGRRKSIGEKNPKGKFVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNP 279
E+ G ++ + F ++IPPPNVTG+LH+GHA N ++D +TRW+RM+G TLW P
Sbjct: 21 EKAGAFRAGANASRPETFCIMIPPPNVTGSLHMGHAFNNTLQDILTRWHRMRGFDTLWQP 80
Query: 280 GCDHAGIATQVVVEKKLWREEKKTRHEIGREKFIEKVWEWKKEKGDRIYEQMKLMGSSLD 339
G DHAGIATQ+VVE++L + + R E+GRE F+EKVWEWK++ G I Q+K +G+S D
Sbjct: 81 GQDHAGIATQMVVERELAKSGQPGRREMGREAFLEKVWEWKEQSGGTIVNQLKRLGASCD 140
Query: 340 WDRACFTMDPKLSRAVTEAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVDKVELTGRT 399
W R FTMDP RAV + FV L+E G IYR +RLV+W ++AISD+EV++VE+ G
Sbjct: 141 WSRNAFTMDPNFQRAVLKVFVDLYEKGFIYRGKRLVNWDPHFETAISDLEVEQVEVNGN- 199
Query: 400 PLRVPGYANPVDFGVLASFAYKLDDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVD 459
+ Y+L DG AT R F + E+ Y
Sbjct: 200 ---------------MWRLRYQLADG------ATYRHPVAFDEEGRPTEWEERDY----- 233
Query: 460 KVELTGRTPLRVPGYANPVDFGVLASFAYKLEDGSGEIVVATTRLETLFADVAVAVHPED 519
+ VATTR ET+ D +AV+P D
Sbjct: 234 -------------------------------------LTVATTRPETMLGDTGIAVNPAD 256
Query: 520 ERYKHLVGKLLVHPFCERKIPILADSFVEKDFGTGAVKISPGHDHNDYEVAQRLNLPLIT 579
ERY HL+GK +V P R+IPI+AD + + GTGAVKI+P HD ND+ V QR L I
Sbjct: 257 ERYAHLIGKEVVLPLVGRRIPIVADDYADPSKGTGAVKITPAHDFNDWGVGQRTGLRAIN 316
Query: 580 VFNEEGVII----GDYGE----------FTGMKRFDARTRVTELISLSISSQGLIKVDKE 625
V + + D+ E G+ R++AR RV ++L+ L +D++
Sbjct: 317 VMSGRATMFLIENPDFTEGCAPSEEALALDGLDRYEARKRV---VALAEEQGWLDGIDQD 373
Query: 626 IERLNKKEEYLKQVIAKLKDQAAAEDYATKVP--ENVRTQNSEKLSE 670
+ + + L DQ + P + VRT +E L E
Sbjct: 374 RHMVPHGDRSKVAIEPMLTDQWFVDTAQIVQPAIDAVRTGRTEILPE 420
Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 107/248 (43%), Gaps = 86/248 (34%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYY------VSF 54
+ + A+ AV+TG +I+P+ KT++ WLEN WCISRQLWWGH+IP +Y F
Sbjct: 402 IVQPAIDAVRTGRTEILPERDAKTYFHWLENIEPWCISRQLWWGHQIPVWYGLDIWPARF 461
Query: 55 NDPAKKPKNVTE-YELWVSG------------------------------------RSKE 77
D + E +EL G R E
Sbjct: 462 EDDGDDTLDEVEIFELLEDGAFNHADPTHHCAFDFEGVSEKFLDDLASLPHPLNNARVVE 521
Query: 78 EAEQ-KAISKFNVTQADISLRQ-----------DEDVLDTWFSSGLFPFSVFGWPDK--- 122
A + +AI + AD +L + D DVLDTWFSSGL+P GWP++
Sbjct: 522 VASRAEAIDRLAQALADYNLNEDPTHLVYPVWRDPDVLDTWFSSGLWPIGTLGWPEETPE 581
Query: 123 ---------------------------QRLSANGI-HSEVFLHPIVRDAHGRKMSKSLGN 154
Q N + V++H +VRD G+KMSKSLGN
Sbjct: 582 LARYFPTNVLITGFDIIFFWVARMMMMQLAVVNEVPFKTVYVHALVRDEKGKKMSKSLGN 641
Query: 155 VIDPLDVV 162
V+DPL+++
Sbjct: 642 VLDPLELI 649
Score = 42.0 bits (97), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%)
Query: 602 ARTRVTELISLSISSQGLIKVDKEIERLNKKEEYLKQVIAKLKDQAAAEDYATKVPENVR 661
A T E S +I +G+I + E RL K E L++ +A L+ + ++ PE V
Sbjct: 900 ALTIAVEGGSFAIPLEGVIDIGAEKARLAKTLEKLEKDMAGLRGRLGNPNFVASAPEEVV 959
Query: 662 TQNSEKLSEAEGELSRLPAALAALKLI 688
+ +L + E E ++L AALA L I
Sbjct: 960 DEARTRLEQGEEEGAKLSAALARLSEI 986
>sp|Q8PCR7|SYV_XANCP Valine--tRNA ligase OS=Xanthomonas campestris pv. campestris
(strain ATCC 33913 / NCPPB 528 / LMG 568) GN=valS PE=3
SV=1
Length = 944
Score = 273 bits (699), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 162/401 (40%), Positives = 215/401 (53%), Gaps = 71/401 (17%)
Query: 217 SQGERTGRRKSIGEKNPKGKFVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTL 276
+Q E G K G P + +++PPPNVTGTLH+GHA + D++ R++RM+G TL
Sbjct: 19 AQWESAGHFKPSGSGEP---YTVLLPPPNVTGTLHMGHAFQQTLMDALVRYHRMRGYDTL 75
Query: 277 WNPGCDHAGIATQVVVEKKLWREEK-KTRHEIGREKFIEKVWEWKKEKGDRIYEQMKLMG 335
W G DHAGIAT++VV + L E K +TR +GRE FI KVWEWK + GD I QM+ +G
Sbjct: 76 WQVGTDHAGIATEMVVSRNLALEGKGETRDTLGREGFIAKVWEWKAQSGDTIERQMRRLG 135
Query: 336 SSLDWDRACFTMDPKLSRAVTEAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVDKVEL 395
+S DW R+ FTMDP+ S AVTEAFV +E G IYR +RLV+W LK+AISD+EV+ VE
Sbjct: 136 TSSDWSRSTFTMDPQPSAAVTEAFVRWYEQGLIYRGQRLVNWDPVLKTAISDLEVENVE- 194
Query: 396 TGRTPLRVPGYANPVDFGVLASFAYKLDDGSGEIVVATTRLETLFADVAVAVHPEDERYK 455
+ G L S Y L DG E +
Sbjct: 195 ---------------EDGFLWSIRYPLADGVTY-----------------------EHVE 216
Query: 456 HLVDKVELTGRTPLRVPGYANPVDFGVLASFAYKLEDGSGEIVVATTRLETLFADVAVAV 515
H D VE L + +VVATTR ET+ D AV V
Sbjct: 217 HDADGVE--------------------------TLRETRDYLVVATTRPETMLGDTAVMV 250
Query: 516 HPEDERYKHLVGKLLVHPFCERKIPILADSFVEKDFGTGAVKISPGHDHNDYEVAQRLNL 575
HP+D RY L +V P R +P++ D +V++ FGTG VK++P HD NDY+V R +L
Sbjct: 251 HPDDARYATLHAAQIVLPLTGRLVPVITDDYVDRAFGTGVVKVTPAHDFNDYQVGVRHDL 310
Query: 576 PLITVFNEEGVIIGDYGE-FTGMKRFDARTRV-TELISLSI 614
PLI +F I + E + G+ R+DAR V +EL L +
Sbjct: 311 PLINLFTVTAAINDNAPERYRGLDRYDARKLVLSELEDLGL 351
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 134/258 (51%), Gaps = 62/258 (24%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
+A++ ++ V++G++K +P + T+ W+EN +DWCISRQLWWGHRIPA++ D A K
Sbjct: 387 LAKRGLELVESGQVKFVPPNWINTYRHWMENIQDWCISRQLWWGHRIPAWF----DEAGK 442
Query: 61 PKNVTEYELWVSGRSKEEAEQKAISKFNVTQADISLRQDEDVLDTWFSSGLFPFSVFGWP 120
+EA+ +A A+++L QD DVL+TWFSS L+PFS GWP
Sbjct: 443 -----------CYVGHDEAQVRATHGLG---AEVALHQDSDVLETWFSSQLWPFSTLGWP 488
Query: 121 DKQRLSANGI-----------------------------------HSEVFLHPIVRDAHG 145
D Q + G +V++ ++RDA G
Sbjct: 489 DAQAMDERGFARYLPSSVLVTGFDIIFFWVARMIMATDSFTGQVPFRDVYITGLIRDAQG 548
Query: 146 RKMSKSLGNVIDPLDVVKGISLAGLQGR----LLQDSNLEAAERQRAADGQKRDYPQGIP 201
+KMSKS GNV+DPLD++ GIS+ L + L+Q E E+ ++++P GI
Sbjct: 549 QKMSKSKGNVLDPLDIIDGISIEDLVAKRTSGLMQPRMAEKIEK-----ATRKEFPDGII 603
Query: 202 ECGTDALRFALAAYMSQG 219
G DALRF +AA + G
Sbjct: 604 AHGADALRFTIAALATHG 621
>sp|Q4UQP3|SYV_XANC8 Valine--tRNA ligase OS=Xanthomonas campestris pv. campestris
(strain 8004) GN=valS PE=3 SV=1
Length = 944
Score = 273 bits (699), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 162/401 (40%), Positives = 215/401 (53%), Gaps = 71/401 (17%)
Query: 217 SQGERTGRRKSIGEKNPKGKFVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTL 276
+Q E G K G P + +++PPPNVTGTLH+GHA + D++ R++RM+G TL
Sbjct: 19 AQWESAGHFKPSGSGEP---YTVLLPPPNVTGTLHMGHAFQQTLMDALVRYHRMRGYDTL 75
Query: 277 WNPGCDHAGIATQVVVEKKLWREEK-KTRHEIGREKFIEKVWEWKKEKGDRIYEQMKLMG 335
W G DHAGIAT++VV + L E K +TR +GRE FI KVWEWK + GD I QM+ +G
Sbjct: 76 WQVGTDHAGIATEMVVSRNLALEGKGETRDTLGREGFIAKVWEWKAQSGDTIERQMRRLG 135
Query: 336 SSLDWDRACFTMDPKLSRAVTEAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVDKVEL 395
+S DW R+ FTMDP+ S AVTEAFV +E G IYR +RLV+W LK+AISD+EV+ VE
Sbjct: 136 TSSDWSRSTFTMDPQPSAAVTEAFVRWYEQGLIYRGQRLVNWDPVLKTAISDLEVENVE- 194
Query: 396 TGRTPLRVPGYANPVDFGVLASFAYKLDDGSGEIVVATTRLETLFADVAVAVHPEDERYK 455
+ G L S Y L DG E +
Sbjct: 195 ---------------EDGFLWSIRYPLADGVTY-----------------------EHVE 216
Query: 456 HLVDKVELTGRTPLRVPGYANPVDFGVLASFAYKLEDGSGEIVVATTRLETLFADVAVAV 515
H D VE L + +VVATTR ET+ D AV V
Sbjct: 217 HDADGVE--------------------------TLRETRDYLVVATTRPETMLGDTAVMV 250
Query: 516 HPEDERYKHLVGKLLVHPFCERKIPILADSFVEKDFGTGAVKISPGHDHNDYEVAQRLNL 575
HP+D RY L +V P R +P++ D +V++ FGTG VK++P HD NDY+V R +L
Sbjct: 251 HPDDARYATLHAAQIVLPLTGRLVPVITDDYVDRAFGTGVVKVTPAHDFNDYQVGVRHDL 310
Query: 576 PLITVFNEEGVIIGDYGE-FTGMKRFDARTRV-TELISLSI 614
PLI +F I + E + G+ R+DAR V +EL L +
Sbjct: 311 PLINLFTVTAAINDNAPERYRGLDRYDARKLVLSELEDLGL 351
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 134/258 (51%), Gaps = 62/258 (24%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
+A++ ++ V++G++K +P + T+ W+EN +DWCISRQLWWGHRIPA++ D A K
Sbjct: 387 LAKRGLELVESGQVKFVPPNWINTYRHWMENIQDWCISRQLWWGHRIPAWF----DEAGK 442
Query: 61 PKNVTEYELWVSGRSKEEAEQKAISKFNVTQADISLRQDEDVLDTWFSSGLFPFSVFGWP 120
+EA+ +A A+++L QD DVL+TWFSS L+PFS GWP
Sbjct: 443 -----------CYVGHDEAQVRATHGLG---AEVALHQDSDVLETWFSSQLWPFSTLGWP 488
Query: 121 DKQRLSANGI-----------------------------------HSEVFLHPIVRDAHG 145
D Q + G +V++ ++RDA G
Sbjct: 489 DAQAMDERGFARYLPSSVLVTGFDIIFFWVARMIMATDSFTGQVPFRDVYITGLIRDAQG 548
Query: 146 RKMSKSLGNVIDPLDVVKGISLAGLQGR----LLQDSNLEAAERQRAADGQKRDYPQGIP 201
+KMSKS GNV+DPLD++ GIS+ L + L+Q E E+ ++++P GI
Sbjct: 549 QKMSKSKGNVLDPLDIIDGISIEDLVAKRTSGLMQPRMAEKIEK-----ATRKEFPDGII 603
Query: 202 ECGTDALRFALAAYMSQG 219
G DALRF +AA + G
Sbjct: 604 AHGADALRFTIAALATHG 621
>sp|B0RVI4|SYV_XANCB Valine--tRNA ligase OS=Xanthomonas campestris pv. campestris
(strain B100) GN=valS PE=3 SV=1
Length = 944
Score = 273 bits (699), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 162/401 (40%), Positives = 215/401 (53%), Gaps = 71/401 (17%)
Query: 217 SQGERTGRRKSIGEKNPKGKFVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTL 276
+Q E G K G P + +++PPPNVTGTLH+GHA + D++ R++RM+G TL
Sbjct: 19 AQWESAGHFKPSGSGEP---YTVLLPPPNVTGTLHMGHAFQQTLMDALVRYHRMRGYDTL 75
Query: 277 WNPGCDHAGIATQVVVEKKLWREEK-KTRHEIGREKFIEKVWEWKKEKGDRIYEQMKLMG 335
W G DHAGIAT++VV + L E K +TR +GRE FI KVWEWK + GD I QM+ +G
Sbjct: 76 WQVGTDHAGIATEMVVSRNLALEGKGETRDTLGREGFIAKVWEWKAQSGDTIERQMRRLG 135
Query: 336 SSLDWDRACFTMDPKLSRAVTEAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVDKVEL 395
+S DW R+ FTMDP+ S AVTEAFV +E G IYR +RLV+W LK+AISD+EV+ VE
Sbjct: 136 TSSDWSRSTFTMDPQPSAAVTEAFVRWYEQGLIYRGQRLVNWDPVLKTAISDLEVENVE- 194
Query: 396 TGRTPLRVPGYANPVDFGVLASFAYKLDDGSGEIVVATTRLETLFADVAVAVHPEDERYK 455
+ G L S Y L DG E +
Sbjct: 195 ---------------EDGFLWSIRYPLADGVTY-----------------------EHVE 216
Query: 456 HLVDKVELTGRTPLRVPGYANPVDFGVLASFAYKLEDGSGEIVVATTRLETLFADVAVAV 515
H D VE L + +VVATTR ET+ D AV V
Sbjct: 217 HDADGVE--------------------------TLRETRDYLVVATTRPETMLGDTAVMV 250
Query: 516 HPEDERYKHLVGKLLVHPFCERKIPILADSFVEKDFGTGAVKISPGHDHNDYEVAQRLNL 575
HP+D RY L +V P R +P++ D +V++ FGTG VK++P HD NDY+V R +L
Sbjct: 251 HPDDARYATLHAAQIVLPLTGRLVPVITDDYVDRAFGTGVVKVTPAHDFNDYQVGVRHDL 310
Query: 576 PLITVFNEEGVIIGDYGE-FTGMKRFDARTRV-TELISLSI 614
PLI +F I + E + G+ R+DAR V +EL L +
Sbjct: 311 PLINLFTVTAAINDNAPERYRGLDRYDARKLVLSELEDLGL 351
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 134/258 (51%), Gaps = 62/258 (24%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
+A++ ++ V++G++K +P + T+ W+EN +DWCISRQLWWGHRIPA++ D A K
Sbjct: 387 LAKRGLELVESGQVKFVPPNWINTYRHWMENIQDWCISRQLWWGHRIPAWF----DEAGK 442
Query: 61 PKNVTEYELWVSGRSKEEAEQKAISKFNVTQADISLRQDEDVLDTWFSSGLFPFSVFGWP 120
+EA+ +A A+++L QD DVL+TWFSS L+PFS GWP
Sbjct: 443 -----------CYVGHDEAQVRATHGLG---AEVALHQDSDVLETWFSSQLWPFSTLGWP 488
Query: 121 DKQRLSANGI-----------------------------------HSEVFLHPIVRDAHG 145
D Q + G +V++ ++RDA G
Sbjct: 489 DAQAMDERGFARYLPSSVLVTGFDIIFFWVARMIMATDSFTGQVPFRDVYITGLIRDAQG 548
Query: 146 RKMSKSLGNVIDPLDVVKGISLAGLQGR----LLQDSNLEAAERQRAADGQKRDYPQGIP 201
+KMSKS GNV+DPLD++ GIS+ L + L+Q E E+ ++++P GI
Sbjct: 549 QKMSKSKGNVLDPLDIIDGISIEDLVAKRTSGLMQPRMAEKIEK-----ATRKEFPDGII 603
Query: 202 ECGTDALRFALAAYMSQG 219
G DALRF +AA + G
Sbjct: 604 AHGADALRFTIAALATHG 621
>sp|Q5TM74|SYVM_MACMU Valine--tRNA ligase, mitochondrial OS=Macaca mulatta GN=VARS2 PE=3
SV=2
Length = 1064
Score = 270 bits (691), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 138/265 (52%), Positives = 178/265 (67%), Gaps = 11/265 (4%)
Query: 237 FVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAGIATQVVVEKKL 296
F M IPPPNVTG+LH+GHALT A++D++ RW+RM+G LW PG DHAGIATQ VVEK+L
Sbjct: 139 FSMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMRGDQVLWVPGSDHAGIATQAVVEKQL 198
Query: 297 WREEKKTRHEIGREKFIEKVWEWKKEKGDRIYEQMKLMGSSLDWDRACFTMDPKLSRAVT 356
W+E+ RHE+ RE F+ +VW+WK+ KG I EQ++ +G+SLDWDR CFTMD S AVT
Sbjct: 199 WKEQGVRRHELSREAFLREVWQWKEAKGGEICEQLRALGASLDWDRECFTMDVGSSVAVT 258
Query: 357 EAFVILHEAGDIYRSERLVHW-SCSLKSAISDIEVDKVELTGRTPLRVPGYANPVDFGVL 415
EAFV L++AG +YR+ RL W SC L +V+ L GRT LR+PG PV FG+L
Sbjct: 259 EAFVRLYKAGLLYRNRRLGRWMSCPLTQLSRRFQVENRPLPGRTQLRLPGCPTPVSFGLL 318
Query: 416 ASFAYKLD-DGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVDKVELTGRTPLRVPGY 474
S A+ +D + E+VV TTR ETL DVAVAVHP+D RY H L GR LR P
Sbjct: 319 FSVAFPVDGEPDAEVVVGTTRPETLPGDVAVAVHPDDSRYTH------LHGRQ-LRHPLM 371
Query: 475 ANPVDFGVLASFAYKLEDGSGEIVV 499
P+ ++ +A + G+G + V
Sbjct: 372 GQPLP--LITDYAVQPHVGTGAVKV 394
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 109/250 (43%), Positives = 141/250 (56%), Gaps = 38/250 (15%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
M +A QAV++G L++ P H K W W + DWC+SRQLWWGH+IPAY V D A+
Sbjct: 488 MGARAAQAVESGALELSPSFHQKNWQHWFSHIGDWCVSRQLWWGHQIPAYLV-VEDHAQG 546
Query: 61 PKNVTEYELWVSGRSKEEAEQKAISKFNVTQADISLRQDEDVLDTWFSSGLFPFSVFGWP 120
E + WV GRS+ EA + A A+++L +D DVLDTWFSS LFPFS GWP
Sbjct: 547 -----EEDCWVVGRSEAEAREVAAELTGRPGAELALERDPDVLDTWFSSALFPFSALGWP 601
Query: 121 DK-------------------------------QRLSANGIHSEVFLHPIVRDAHGRKMS 149
+ +L+ S+V LHP+VRD GRKMS
Sbjct: 602 QETPDLARFYPLSLLETGSDLLLFWVGRMVMLGTQLTGRLPFSKVLLHPMVRDRQGRKMS 661
Query: 150 KSLGNVIDPLDVVKGISLAGLQGRLLQDSNLEAAERQRAADGQKRDYPQGIPECGTDALR 209
KSLGNV+DP ++ G + LQ + L+ NL+ AE A QK+D+P GIPECGTDALR
Sbjct: 662 KSLGNVLDPRHIISGAEMQVLQEK-LRSGNLDPAELAIVAAAQKKDFPHGIPECGTDALR 720
Query: 210 FALAAYMSQG 219
F L ++ QG
Sbjct: 721 FTLCSHGVQG 730
Score = 129 bits (324), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 95/156 (60%), Gaps = 2/156 (1%)
Query: 458 VDKVELTGRTPLRVPGYANPVDFGVLASFAYKLE-DGSGEIVVATTRLETLFADVAVAVH 516
V+ L GRT LR+PG PV FG+L S A+ ++ + E+VV TTR ETL DVAVAVH
Sbjct: 293 VENRPLPGRTQLRLPGCPTPVSFGLLFSVAFPVDGEPDAEVVVGTTRPETLPGDVAVAVH 352
Query: 517 PEDERYKHLVGKLLVHPFCERKIPILADSFVEKDFGTGAVKISPGHDHNDYEVAQRLNLP 576
P+D RY HL G+ L HP + +P++ D V+ GTGAVK++P H D E+ R L
Sbjct: 353 PDDSRYTHLHGRQLRHPLMGQPLPLITDYAVQPHVGTGAVKVTPAHSPADAEMGARHGLS 412
Query: 577 LITVFNEEGVIIGDYGEF-TGMKRFDARTRVTELIS 611
+ V E+G + G++ G+ RF AR ++ ++S
Sbjct: 413 PLNVIAEDGTMTSLCGDWLQGLHRFVAREKIVSVLS 448
>sp|Q92Q37|SYV_RHIME Valine--tRNA ligase OS=Rhizobium meliloti (strain 1021) GN=valS
PE=3 SV=1
Length = 947
Score = 268 bits (685), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 157/411 (38%), Positives = 212/411 (51%), Gaps = 96/411 (23%)
Query: 225 RKSIGEKNPKGKFVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHA 284
R + K F +VIPPPNVTG+LH+GHAL N ++D + R+ RM+GK LW PG DHA
Sbjct: 26 RAGVNAKPDAETFTIVIPPPNVTGSLHMGHALNNTLQDIMVRFERMRGKDVLWQPGMDHA 85
Query: 285 GIATQVVVEKKLWREEKKTRHEIGREKFIEKVWEWKKEKGDRIYEQMKLMGSSLDWDRAC 344
GIATQ+VVE++L + +R ++GRE FIE+VWEWK E G I+ Q+K +G+S DW R
Sbjct: 86 GIATQMVVERQLMERQLPSRRDMGREAFIERVWEWKAESGGLIFNQLKRLGASCDWSRER 145
Query: 345 FTMDPKLSRAVTEAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVDKVELTGRTPLRVP 404
FTMD LS AV E FV L++ G IYR RLV+W L++AISDIEV+ P+ V
Sbjct: 146 FTMDEGLSEAVIEVFVSLYKEGLIYRDTRLVNWDPKLQTAISDIEVE--------PVEVN 197
Query: 405 GYANPVDFGVLASFAYKLDDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVDKVELT 464
G+ L Y L++G
Sbjct: 198 GH--------LWHLRYPLEEGVT------------------------------------- 212
Query: 465 GRTPLRVPGYANPVDFGVLASFAYKLEDGSGE-------IVVATTRLETLFADVAVAVHP 517
Y +PV F EDG+ +VVATTR ET+ D VAVHP
Sbjct: 213 ---------YQHPVAFD---------EDGNATEWETRNYLVVATTRPETMLGDTGVAVHP 254
Query: 518 EDERYKHLVGKLLVHPFCERKIPILADSFVEKDFGTGAVKISPGHDHNDYEVAQRLNLPL 577
+D RYK +VGK ++ P R+IPI+AD + + GTGAVK++P HD ND++V +R L
Sbjct: 255 DDVRYKGIVGKHVILPIVGRRIPIVADEYPDPTTGTGAVKMTPAHDFNDFDVGKRQGLRQ 314
Query: 578 ITVFNEEGVII------------------GDYGEFTGMKRFDARTRVTELI 610
+ V +G I G + G RF+AR + E++
Sbjct: 315 VNVLTADGRITIKNNEDFLEGLDHPAALHGAWDRLEGKDRFEARKLIVEML 365
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 132/327 (40%), Gaps = 125/327 (38%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
+A+ A+ AVK G +P + KT+++W+EN + WCISRQLWWGH+IPA+Y
Sbjct: 406 LAKPAIAAVKEGRTNFVPKNWEKTFFEWMENIQPWCISRQLWWGHQIPAWY--------G 457
Query: 61 PKNVTEYELWVSGRSKEEAEQKAISKFNVTQADIS---------------LRQDEDVLDT 105
P E R++EEA AI + + + L +DEDVLDT
Sbjct: 458 PDGQIFVE-----RNEEEALHAAIQHYIAHEGPMKAYVEDLLENFKPGEILTRDEDVLDT 512
Query: 106 WFSSGLFPFSVFGWPDKQ------------------------RLSANGIH---------- 131
WFSS L+PFS GWP + R+ G+H
Sbjct: 513 WFSSALWPFSTLGWPKETPELDKYYQTDVLVTGFDIIFFWVARMMMMGLHFMKDADGTPV 572
Query: 132 ---SEVFLHPIVRDAHGRKMSKSLGNVIDPLDVVKGISLAGLQGRLLQDSNLEAAERQRA 188
V++H +VRD +G+KMSKS GNVIDPL++
Sbjct: 573 EPFHTVYVHALVRDKNGQKMSKSKGNVIDPLEL--------------------------- 605
Query: 189 ADGQKRDYPQGIPECGTDALRFALAAYMSQGERTGRRKSIGEKNPKGKFVMVIPPPNVTG 248
I E G DALRF LA +QG + P + G
Sbjct: 606 -----------IDEYGADALRFTLAIMAAQGRDVK-----------------LDPARIAG 637
Query: 249 TLHLGHALTNAVEDSITRWNRMKGKTT 275
+ G L NA TR+ M G +
Sbjct: 638 YRNFGTKLWNA-----TRFAEMNGAIS 659
>sp|Q3BP98|SYV_XANC5 Valine--tRNA ligase OS=Xanthomonas campestris pv. vesicatoria
(strain 85-10) GN=valS PE=3 SV=1
Length = 980
Score = 265 bits (678), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 150/360 (41%), Positives = 196/360 (54%), Gaps = 69/360 (19%)
Query: 233 PKGK---FVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAGIATQ 289
P GK + +++PPPNVTGTLH+GHA + D++ R++RM+G TLW G DHAGIAT+
Sbjct: 29 PSGKGEPYTVLLPPPNVTGTLHMGHAFQQTLMDALVRYHRMRGYDTLWQVGTDHAGIATE 88
Query: 290 VVVEKKLWREEK-KTRHEIGREKFIEKVWEWKKEKGDRIYEQMKLMGSSLDWDRACFTMD 348
+VV + L E K +TR +GRE FI KVWEWK E GD I QM+ +G+S DW R+ FTMD
Sbjct: 89 MVVSRNLALEGKGQTRDSLGREGFIAKVWEWKAESGDTIERQMRRLGTSSDWSRSTFTMD 148
Query: 349 PKLSRAVTEAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVDKVELTGRTPLRVPGYAN 408
P+ S AV EAFV +E G IYR +RLV+W LK+AISD+EV+ VE
Sbjct: 149 PQPSAAVNEAFVRWYEQGLIYRGQRLVNWDPVLKTAISDLEVENVE-------------- 194
Query: 409 PVDFGVLASFAYKLDDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVDKVELTGRTP 468
+ G L S Y L DG E +H D E
Sbjct: 195 --EDGFLWSIRYPLADGVSY-----------------------EHVEHDADGNE------ 223
Query: 469 LRVPGYANPVDFGVLASFAYKLEDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVGK 528
L + +VVATTR ET+ D AV VHPED RY L
Sbjct: 224 --------------------TLRETRDYLVVATTRPETMLGDTAVMVHPEDARYLTLHDA 263
Query: 529 LLVHPFCERKIPILADSFVEKDFGTGAVKISPGHDHNDYEVAQRLNLPLITVFNEEGVII 588
+V P R +P++ D +V++ FGTG VK++P HD NDY+V +R NLPL+ +F + II
Sbjct: 264 RIVLPLTGRHVPVITDDYVDRAFGTGVVKVTPAHDFNDYQVGERHNLPLVNLFTVDAKII 323
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 136/258 (52%), Gaps = 62/258 (24%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
+A++ ++ V++G++K +P + T+ W+EN +DWCISRQLWWGHRIPA++ D A
Sbjct: 423 LAKRGLELVESGQIKFVPPNWINTYRHWMENIQDWCISRQLWWGHRIPAWF----DEAG- 477
Query: 61 PKNVTEYELWVSGRSKEEAEQKAISKFNVTQADISLRQDEDVLDTWFSSGLFPFSVFGWP 120
T Y +EAE +A AD++L QD DVL+TWFSS L+PFS GWP
Sbjct: 478 ----TCYV------GHDEAEVRAKHGLG---ADVALHQDSDVLETWFSSQLWPFSTLGWP 524
Query: 121 DKQRLSANGI-----------------------------------HSEVFLHPIVRDAHG 145
D Q ++ G +V++ ++RDA G
Sbjct: 525 DAQAMAERGFARYLPSSVLVTGFDIIFFWVARMIMATDSFTGQVPFRDVYITGLIRDAQG 584
Query: 146 RKMSKSLGNVIDPLDVVKGISLAGLQGR----LLQDSNLEAAERQRAADGQKRDYPQGIP 201
+KMSKS GNV+DPLD++ GIS+ L + L+Q E E+ ++++P GI
Sbjct: 585 QKMSKSKGNVLDPLDIIDGISIEDLVAKRTHGLMQPRMAEKIEK-----ATRKEFPDGII 639
Query: 202 ECGTDALRFALAAYMSQG 219
G DALRF +AA + G
Sbjct: 640 VHGADALRFTIAALATHG 657
>sp|Q9A8N3|SYV_CAUCR Valine--tRNA ligase OS=Caulobacter crescentus (strain ATCC 19089 /
CB15) GN=valS PE=3 SV=1
Length = 906
Score = 265 bits (677), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 150/371 (40%), Positives = 200/371 (53%), Gaps = 65/371 (17%)
Query: 237 FVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAGIATQVVVEKKL 296
FV+VIPPPNVTG+LH+GHAL N ++D +TR++RM+GK LW PG DHAGIATQ+VVE++L
Sbjct: 36 FVIVIPPPNVTGSLHIGHALNNTLQDVLTRFHRMRGKAALWLPGTDHAGIATQMVVERQL 95
Query: 297 WREEKKTRHEIGREKFIEKVWEWKKEKGDRIYEQMKLMGSSLDWDRACFTMDPKLSRAVT 356
R ++GRE F++KVWEWK E G I Q++ +G+S DW R FT+D LS AV
Sbjct: 96 AAAGNIGRRDMGREAFVDKVWEWKAESGGAITNQLRRLGASCDWSRERFTLDEGLSAAVR 155
Query: 357 EAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVDKVELTGRTPLRVPGYANPVDFGVLA 416
+ FV L++ +YR +RLV+W ++AISD+EV++ E+ G
Sbjct: 156 KVFVQLYKQNLLYRDKRLVNWDPQFQTAISDLEVEQKEVDG----------------AYW 199
Query: 417 SFAYKLDDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVDKVELTGRTPLRVPGYAN 476
FAY L DG Y+H + E T Y
Sbjct: 200 HFAYPLADGV--------------------------TYQHPIAFDEDGKATEFETRDY-- 231
Query: 477 PVDFGVLASFAYKLEDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVGKLLVHPFCE 536
IVVATTR ET+ D VAVHP+DERYK LVGK + P
Sbjct: 232 --------------------IVVATTRPETMLGDTGVAVHPDDERYKGLVGKFVTLPIVG 271
Query: 537 RKIPILADSFVEKDFGTGAVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDY-GEFT 595
R+IPI+AD + + G+GAVKI+P HD ND+ V +R L I + E + E+
Sbjct: 272 RRIPIVADDYADPTKGSGAVKITPAHDFNDFGVGKRAGLEAINILTVEAKLNDSVPAEYV 331
Query: 596 GMKRFDARTRV 606
GM RF AR +
Sbjct: 332 GMDRFVARKAI 342
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 106/193 (54%), Gaps = 47/193 (24%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
+A+ A++AV+TGE P H KT+++WL N WC+SRQLWWGHRIPA++
Sbjct: 387 LAQPALKAVETGETIFEPKHWEKTYFEWLRNIEPWCVSRQLWWGHRIPAWFGP------- 439
Query: 61 PKNVTEYELWVSGRSKEEAEQKAISKFNVTQADISLRQDEDVLDTWFSSGLFPFSVFGWP 120
E ++V S+E A A ++F AD+ L QDEDVLDTWFSS L+PFS GWP
Sbjct: 440 -----EGSIFVE-ESEEAAYAAARAQFG---ADVQLTQDEDVLDTWFSSALWPFSTLGWP 490
Query: 121 DKQ------------------------RLSANGIH-------SEVFLHPIVRDAHGRKMS 149
+K R+ GIH +VF++ +VRD G KMS
Sbjct: 491 EKTSDLERFYPTSTLVTGFDIIFFWVARMMMMGIHFMGEAPFKQVFINALVRDEKGAKMS 550
Query: 150 KSLGNVIDPLDVV 162
KS GNV+DPL ++
Sbjct: 551 KSKGNVMDPLILI 563
>sp|B0U1L1|SYV_XYLFM Valine--tRNA ligase OS=Xylella fastidiosa (strain M12) GN=valS PE=3
SV=1
Length = 991
Score = 263 bits (671), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 164/457 (35%), Positives = 235/457 (51%), Gaps = 79/457 (17%)
Query: 213 AAYMSQGERTGRRKSIGEKNPKGKFVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKG 272
A ++ E G K G P + +++PPPNVTGTLH+GHA + D++ R++RM G
Sbjct: 15 ARLYAEWEAAGHFKPSGTGQP---YTILLPPPNVTGTLHMGHAFQQTLMDALVRYHRMCG 71
Query: 273 KTTLWNPGCDHAGIATQVVVEKKLWREEK-KTRHEIGREKFIEKVWEWKKEKGDRIYEQM 331
TLW G DHAGIAT++VV + + E + +TR +GR+ FI KVWEWK++ GD I QM
Sbjct: 72 DDTLWQVGTDHAGIATEMVVSRNVMLEGRGETRDSLGRDGFINKVWEWKQQSGDTIERQM 131
Query: 332 KLMGSSLDWDRACFTMDPKLSRAVTEAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVD 391
+ +G S DW R+ FTMDP+ S AVTEAFV +E G IYR +RLV+W LK+AISD+EV+
Sbjct: 132 RRLGVSADWSRSTFTMDPQPSAAVTEAFVRWYEEGLIYRGQRLVNWDPVLKTAISDLEVE 191
Query: 392 KVELTGRTPLRVPGYANPVDFGVLASFAYKLDDGSGEIVVATTRLETLFADVAVAVHPED 451
V + G+L S Y L DG
Sbjct: 192 NV----------------AEEGMLWSIRYPLSDGV------------------------- 210
Query: 452 ERYKHLVDKVELTGRTPLRVPGYANPVDFGVLASFAYKLEDGSGEIVVATTRLETLFADV 511
Y+H+ + + G LR + ++VATTR ETL D
Sbjct: 211 -TYEHI--EHDAAGNEILR---------------------ETRDSLIVATTRPETLLGDT 246
Query: 512 AVAVHPEDERYKHLVGKLLVHPFCERKIPILADSFVEKDFGTGAVKISPGHDHNDYEVAQ 571
AV VHPED RY L+GK + P R++ +++D+ V+ FG+G VK++P HD ND+EV
Sbjct: 247 AVMVHPEDRRYTALIGKTVTLPLTGRQVEVISDTCVDPTFGSGVVKVTPAHDFNDFEVGV 306
Query: 572 RLNLPLITVFNEEGVIIGD---YGEFTGMKRFDARTRVTELISLSISSQGLIKVDKEIER 628
R LP+I V ++ I+ + G T + +R +I + S + +
Sbjct: 307 RHQLPMIKVLDDAACILSETYAQGWMTPLNNPKGDSRWINIIDIPESE---FVIPAHLAG 363
Query: 629 LNKKEEYLKQVIAKLKDQA---AAEDYATKVPENVRT 662
L++ E KQ++A L Q AA + +VP RT
Sbjct: 364 LDRYEAR-KQILADLDTQGLLVAAIPHTLQVPRGDRT 399
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 129/254 (50%), Gaps = 53/254 (20%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
+A + ++ V+ G ++ +P + T+ W+ N RDWCISRQLWWGHRIPA++ ++
Sbjct: 418 LAARGLELVERGAVRFVPPNWINTYRHWMNNIRDWCISRQLWWGHRIPAWFDEYDGS--- 474
Query: 61 PKNVTEYELWVSGRSKEEAEQKAISKFNVTQADISLRQDEDVLDTWFSSGLFPFSVFGWP 120
+ GRS+ E K + +++L QD +VL+TWFSS L+PFS GWP
Sbjct: 475 ---------FYVGRSEAEVRAK-----HALGPEVTLTQDSNVLETWFSSQLWPFSTLGWP 520
Query: 121 DKQRLSANGIH-----------------------------------SEVFLHPIVRDAHG 145
D ++ G +V++ ++RDA G
Sbjct: 521 DPTAMAERGFERYLPSSVLVTGFDIIFFWVARMIMATDHFTGNVPFHDVYITGLIRDAQG 580
Query: 146 RKMSKSLGNVIDPLDVVKGISLAGLQGRLLQDSNLEAAERQRAADGQKRDYPQGIPECGT 205
+KMSKS GNV+DPLD++ GI+L L + ++ ++ A ++++P GI G
Sbjct: 581 QKMSKSKGNVLDPLDIIDGITLDDLVAK-RTTGLMQPKLAEKIAKATRKEFPDGIAPHGA 639
Query: 206 DALRFALAAYMSQG 219
DALRF +AA + G
Sbjct: 640 DALRFTIAALATHG 653
>sp|Q6MQK8|SYV_BDEBA Valine--tRNA ligase OS=Bdellovibrio bacteriovorus (strain ATCC
15356 / DSM 50701 / NCIB 9529 / HD100) GN=valS PE=3 SV=1
Length = 894
Score = 254 bits (649), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 147/389 (37%), Positives = 209/389 (53%), Gaps = 86/389 (22%)
Query: 220 ERTGRRKSIGEKNPKGKFVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNP 279
E+ G K+ +++ K F +++PPPNVTG LH+GHAL + ++D + RW RM G T+W P
Sbjct: 25 EKNGYFKA-QDQSTKPPFSIILPPPNVTGFLHMGHALDHTIQDMMIRWKRMNGYNTMWLP 83
Query: 280 GCDHAGIATQVVVEKKLWREEKKTRHEIGREKFIEKVWEWKKEKGDRIYEQMKLMGSSLD 339
G DHAGIATQ VVE++L +++ TRH++GREKF+EKVW+WK + G+RIY QM+ +G S D
Sbjct: 84 GTDHAGIATQSVVEREL-KKDGVTRHDLGREKFVEKVWDWKHQYGNRIYGQMRRLGDSCD 142
Query: 340 WDRACFTMDPKLSRAVTEAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVDKVELTGRT 399
WDRA FT+D +S+AV + FV LH+ G IYR +RLV+WS L++AISD+EV+ ++ G
Sbjct: 143 WDRAVFTLDEGVSKAVRKVFVSLHKKGLIYRGQRLVNWSGPLETAISDLEVEHKQIKGS- 201
Query: 400 PLRVPGYANPVDFGVLASFAYKLDDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVD 459
L Y L+DGSG +VVATTR ET+ D AV VHPEDERYKHL+
Sbjct: 202 ---------------LYHVKYPLEDGSGFLVVATTRPETMLGDSAVCVHPEDERYKHLIG 246
Query: 460 KVELTGRTPLRVPGYANPVDFGVLASFAYKLEDGSGEIVVATTRLETLFADVAVAVHPED 519
K L T ++ ++A T ++ F V + P
Sbjct: 247 KNVLLPLTNRKIK-------------------------IIADTYVDKEFGSGVVKITP-- 279
Query: 520 ERYKHLVGKLLVHPFCERKIPILADSFVEKDFGTGAVKISPGHDHNDYEVAQRLNLPLIT 579
H F NDY++ + NL I
Sbjct: 280 -----------AHDF------------------------------NDYKIGKTHNLEFIN 298
Query: 580 VFNEEGVIIGDYGEFTGMKRFDARTRVTE 608
+ ++ I + G + G+K +AR R+ E
Sbjct: 299 ILTKKAEINENGGVYAGLKVQEARKRILE 327
Score = 123 bits (308), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 111/255 (43%), Gaps = 97/255 (38%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
+A A + + G ++ P+ TK + WL N DWCISRQLWWGHRIP +Y
Sbjct: 370 LAVPAKRVAENGTIRFEPESWTKVYLHWLNNIEDWCISRQLWWGHRIPVWYC-------- 421
Query: 61 PKNVTEYELWVSGRSKEEAEQKAISKFNVTQAD----ISLRQDEDVLDTWFSSGLFPFSV 116
E+ + +++ +VT + L QD+DVLDTWFSS L+PFS
Sbjct: 422 ----------------EDCNHQTVAETDVTACEKCGSTKLHQDDDVLDTWFSSALWPFST 465
Query: 117 FGWPDKQ------------------------RLSANGIHSE-------VFLHPIVRDAHG 145
GWP++ R+ G+ + V++H +VRD+ G
Sbjct: 466 MGWPNETETLKTFYPTSYLVTGHDIIFFWVARMIMMGLEFQRDVPFRTVYIHGLVRDSQG 525
Query: 146 RKMSKSLGNVIDPLDVVKGISLAGLQGRLLQDSNLEAAERQRAADGQKRDYPQGIPECGT 205
RKMSKSLGN IDP+++++ + G
Sbjct: 526 RKMSKSLGNSIDPVEMIE--------------------------------------KHGA 547
Query: 206 DALRFALAAYMSQGE 220
DALRF AA++ G+
Sbjct: 548 DALRFTFAAHLYSGK 562
Score = 35.4 bits (80), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Query: 577 LITVFNEEGVIIGDYGEFTGMKRFDARTRVTEL-ISLSISSQGLIKVDKEIERLNKKEEY 635
L+T+ E + IG G+ MK A V + + + I +GL+ D+E++R+NK E
Sbjct: 786 LMTMGRLENMEIGPEGDM--MKCAVAPVVVKDASVKVIIPLEGLVDFDEEVKRINKSIEK 843
Query: 636 LKQVIAKLKDQAAAEDYATKVPENVRTQNSEKLSEAEGELSRLPAALAALK 686
L + I L + + E + E V + L++++ +L L AL +
Sbjct: 844 LTRDIGMLSGKLSNEKFVANADEEVVAADRALLAQSKVQLDSLRDALTRFQ 894
>sp|Q7UXH9|SYV_RHOBA Valine--tRNA ligase OS=Rhodopirellula baltica (strain SH1) GN=valS
PE=3 SV=2
Length = 1035
Score = 254 bits (648), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 153/399 (38%), Positives = 217/399 (54%), Gaps = 46/399 (11%)
Query: 234 KGKFVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAGIATQVVVE 293
K F +VIPPPNVTG LHLGH L N ++D + R RM+G TLW PG DHAGIATQ VVE
Sbjct: 35 KPPFSVVIPPPNVTGALHLGHGLNNTLQDIVVRRKRMQGFETLWMPGTDHAGIATQAVVE 94
Query: 294 KKLWREEKKTRHEIGREKFIEKVWEWKKEKGDRIYEQMKLMGSSLDWDRACFTMDPKLSR 353
++L +E KTRH++GRE ++++W+WK + +RI Q+K MG+S DW+R FT+DP +
Sbjct: 95 RRLKEQEDKTRHDLGREALVDRIWQWKDQYEERIIGQLKRMGTSCDWERLRFTLDPICAA 154
Query: 354 AVTEAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVDKVELTGRTPLRVPGYANPVDFG 413
AV F L IYR +RLV+W L++A+SD EV N G
Sbjct: 155 AVRATFFDLFGKRRIYRGKRLVNWDTFLQTAVSDDEV----------------FNETKKG 198
Query: 414 VLASFAYK-LDDGSGE---IVVATTRLETLFADVAVAVHPEDERYKHLVDKVELTGRTPL 469
F Y +D GE + +ATTR ET+ D AVAVHP+ +D VE R L
Sbjct: 199 HFYHFRYPVIDPKPGEPEFVTIATTRPETMLGDTAVAVHPDP---AAALDAVEAGLREKL 255
Query: 470 RVPGYANPVDFG-VLASFAYKLEDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVGK 528
VD + + + E+ E++ +L + AD G+
Sbjct: 256 SDANEKEAVDLNKQIEALQKRREERLPELI----QLRDMAAD----------------GR 295
Query: 529 LLVHPFCERKIPILADSFVEKDFGTGAVKISPGHDHNDYEVAQRLNLPLITVFNEEGVII 588
L+ P +R+I ++AD + + + G+G VKI+P HD NDYEV R +LP+I + N +G +
Sbjct: 296 KLMLPLVDREIDLVADEWAKPEMGSGCVKITPAHDPNDYEVGIRQDLPMINILNSDGTLN 355
Query: 589 GDYGEFTGMKRFDARTRVTELISLSISSQGLIKVDKEIE 627
G+ G+F G+ AR V + + G I+ D+EIE
Sbjct: 356 GEGGQFAGLTIPKARKAVVAALE-ELGLMGDIE-DREIE 392
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 100/214 (46%), Gaps = 52/214 (24%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
+A+ A+ AV ++I P + K + WL RDW +SRQLWWGHRIP + V +
Sbjct: 418 LAQSAMDAVSDERVQIFPARYRKGYLDWLSEKRDWPVSRQLWWGHRIPIWSVGGLSQQEA 477
Query: 61 PKNVTEYELWVSGRSKEEAEQ-------------KAI-----SKFNVTQADI---SLRQD 99
+ +E E + A++ KA+ S+ +AD+ L+QD
Sbjct: 478 NELSSELEKLAERHPDQIAQRIDSDGVDAAGEPTKAVFVCIRSEDETVEADVEALGLQQD 537
Query: 100 EDVLDTWFSSGLFPFSVFGWPDKQ------------------------RLSANGIH---- 131
DVLDTWFSS L+P S GWP + R+ G++
Sbjct: 538 PDVLDTWFSSALWPHSTLGWPAQTPELAKFYPTATLITSRDILTLWVARMVLMGLNNVGE 597
Query: 132 ---SEVFLHPIVRDAHGRKMSKSLGNVIDPLDVV 162
SEVF+HP + D G MSKS GN +DP+DV+
Sbjct: 598 VPFSEVFIHPKILDGLGETMSKSKGNGVDPIDVI 631
>sp|Q0VSA8|SYV_ALCBS Valine--tRNA ligase OS=Alcanivorax borkumensis (strain SK2 / ATCC
700651 / DSM 11573) GN=valS PE=3 SV=1
Length = 931
Score = 248 bits (633), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 132/272 (48%), Positives = 174/272 (63%), Gaps = 25/272 (9%)
Query: 214 AYMSQGERTGRRKSIGEKNPKGKFVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGK 273
++ E+ G K G+ +P F ++IPPPNVTG+LH+GHA + + D++ R+ RM+G+
Sbjct: 15 SWYENWEQAGHFKPSGQGDP---FCIMIPPPNVTGSLHMGHAFQDTIMDTLVRYRRMQGR 71
Query: 274 TTLWNPGCDHAGIATQVVVEKKLWREEKKTRHEIGREKFIEKVWEWKKEKGDRIYEQMKL 333
TLW G DHAGIATQ+VVE+KL E RHE+GREKF++KVWEWK+E G I Q++
Sbjct: 72 NTLWQVGTDHAGIATQMVVERKL-AGEGTNRHELGREKFLDKVWEWKRESGGTITRQLRR 130
Query: 334 MGSSLDWDRACFTMDPKLSRAVTEAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVDKV 393
MG+S+DW R FTMD LS AV E FV LH+ G IYR +RLV+W +L +AISD+EV+ V
Sbjct: 131 MGASVDWTRERFTMDDGLSNAVREVFVRLHKEGLIYRGKRLVNWDPALHTAISDLEVENV 190
Query: 394 ELTGRTPLRVPGYANPVDFGVLASFAYKLDDGSGEIVVATTRLETLFADVAVAVHPEDER 453
E G + F Y L DGSG +VVATTR ET+ D AVAVHP+D R
Sbjct: 191 EEQGH----------------MWHFRYPLSDGSGHLVVATTRPETMLGDTAVAVHPQDPR 234
Query: 454 YKHLVDK---VELTGRT-PLRVPGYANPVDFG 481
YK ++ K + L R P+ Y +P DFG
Sbjct: 235 YKDMIGKSIRLPLADRNIPIIADDYVDP-DFG 265
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/250 (35%), Positives = 124/250 (49%), Gaps = 51/250 (20%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
+A+ A+ AV+ G+++ +P ++ ++ W+ + +DWCISRQLWWGHRIPA+Y
Sbjct: 365 LAKPAIAAVENGDIQFVPKNYENMYFSWMRDLQDWCISRQLWWGHRIPAWY-------DA 417
Query: 61 PKNVTEYELWVSGRSKEEAEQKAISKFNVTQADISLRQDEDVLDTWFSSGLFPFSVFGWP 120
NV GR +EE + D L QD+DVLDTWFSS L+ FS GWP
Sbjct: 418 DGNV------YVGRDEEEVRAEN------NLGDTPLSQDDDVLDTWFSSALWTFSTLGWP 465
Query: 121 DKQ-------------------------------RLSANGIHSEVFLHPIVRDAHGRKMS 149
D + + +V++H +VRD G+KMS
Sbjct: 466 DDTDALRTFHPTDVLVTGFDIIFFWVARMIMMTLKFTDQVPFKKVYVHGLVRDNDGQKMS 525
Query: 150 KSLGNVIDPLDVVKGISLAGLQGRLLQDSNLEAAERQRAADGQKRDYPQGIPECGTDALR 209
KS GNV+DPLD++ GI+L L + + E+Q K D+P GI GTDALR
Sbjct: 526 KSKGNVLDPLDMIDGITLDALIDKRTKGLMQPQKEKQITKRTNK-DFPDGINPYGTDALR 584
Query: 210 FALAAYMSQG 219
F + S G
Sbjct: 585 FTFLSLASTG 594
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 95/145 (65%), Gaps = 6/145 (4%)
Query: 481 GVLASFAYKLEDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVGKLLVHPFCERKIP 540
G + F Y L DGSG +VVATTR ET+ D AVAVHP+D RYK ++GK + P +R IP
Sbjct: 194 GHMWHFRYPLSDGSGHLVVATTRPETMLGDTAVAVHPQDPRYKDMIGKSIRLPLADRNIP 253
Query: 541 ILADSFVEKDFGTGAVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYGE-FTGMKR 599
I+AD +V+ DFG+G VKI+P HD NDYEV +R +LP+I + + + + E + G+ R
Sbjct: 254 IIADDYVDPDFGSGCVKITPAHDFNDYEVGKRHDLPMINILTIDAALNDEVPEGYRGLDR 313
Query: 600 FDARTRVTELISLSISSQGLI-KVD 623
+AR +V + + + GL+ KVD
Sbjct: 314 VEARKKVVD----DLDALGLLEKVD 334
Score = 37.0 bits (84), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 41/79 (51%)
Query: 610 ISLSISSQGLIKVDKEIERLNKKEEYLKQVIAKLKDQAAAEDYATKVPENVRTQNSEKLS 669
+ + + GLI + EIERL+K+ E L++ + + + + + K P+ V + KL
Sbjct: 853 MEILVPMAGLIDKEAEIERLSKEIEKLRKEVGRAEGKLKNPKFVDKAPQAVVDKEKAKLD 912
Query: 670 EAEGELSRLPAALAALKLI 688
+ +L++L L +K +
Sbjct: 913 DYRSQLAKLEEQLEKIKYL 931
>sp|Q6F8F0|SYV_ACIAD Valine--tRNA ligase OS=Acinetobacter sp. (strain ADP1) GN=valS PE=3
SV=1
Length = 971
Score = 247 bits (630), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 134/267 (50%), Positives = 172/267 (64%), Gaps = 32/267 (11%)
Query: 229 GEKNPKGK---FVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAG 285
G P G+ F ++IPPPNVTG+LH+GH NA+ D++TR+NRM GK TLW PG DHAG
Sbjct: 37 GYFKPSGQGDSFCIMIPPPNVTGSLHMGHGFNNAIMDALTRYNRMMGKNTLWQPGTDHAG 96
Query: 286 IATQVVVEKKLWREEKKTRHEIGREKFIEKVWEWKKEKGDRIYEQMKLMGSSLDWDRACF 345
IATQ+VVE++L + +RH++GRE+FI+KVWEWK++ G I +Q++ +GSS+DW R F
Sbjct: 97 IATQMVVERQL-AAQNISRHDLGREQFIDKVWEWKEQSGGTITKQIRRLGSSVDWSRERF 155
Query: 346 TMDPKLSRAVTEAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVDKVELTGRTPLRVPG 405
TMD LS AV E FV LHE G IYR +RLV+W L++A+SD+EV+ VE
Sbjct: 156 TMDDGLSNAVKEVFVKLHEDGLIYRGKRLVNWDPKLQTALSDLEVESVE----------- 204
Query: 406 YANPVDFGVLASFAY-------KLDDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLV 458
+ G L F Y K DG +VVATTR ETL D AVAVHPEDERY HL+
Sbjct: 205 -----EKGSLWHFKYFFEDKSLKTQDGHDFLVVATTRPETLLGDTAVAVHPEDERYAHLI 259
Query: 459 DK---VELTGR-TPLRVPGYANPVDFG 481
K + +TGR P+ Y DFG
Sbjct: 260 GKNIVLPITGRLVPIVADEYVEK-DFG 285
Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/263 (37%), Positives = 137/263 (52%), Gaps = 64/263 (24%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
+A+ A++AV+ G +K +P+ +T + W+ N +DWCISRQLWWGHRIPA+Y +
Sbjct: 401 LAQPAIEAVQDGRIKFVPEQYTNMYMAWMNNIQDWCISRQLWWGHRIPAWYDA------- 453
Query: 61 PKNVTEYELWVSGRSKEEAEQKAISKFNVTQADISLRQDEDVLDTWFSSGLFPFSVFGWP 120
E ++V GR++EE K N AD++L+QDEDVLDTWFSSGL+ FS GW
Sbjct: 454 -----EGNVYV-GRNEEEVRAK-----NNLAADLALQQDEDVLDTWFSSGLWTFSTLGWT 502
Query: 121 -----DKQRLSANGIH--------------------------------------SEVFLH 137
D + N H V++H
Sbjct: 503 GDAKKDAENYFLNTFHPTDVLVTGFDIIFFWVARMIMMTMHFMKNEDGTPQVPFKTVYVH 562
Query: 138 PIVRDAHGRKMSKSLGNVIDPLDVVKGISLAGL-QGRLLQDSNLEAAERQRAADGQKRDY 196
+VRD G+KMSKS GNV+DPLD++ GI L L Q R N + AE+ A ++++
Sbjct: 563 GLVRDGEGQKMSKSKGNVLDPLDLIDGIDLESLVQKRTFGLMNPKQAEKIEKA--TRKEF 620
Query: 197 PQGIPECGTDALRFALAAYMSQG 219
P+GI GTDA+RF A + G
Sbjct: 621 PEGINSYGTDAVRFTFCALANTG 643
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/138 (45%), Positives = 89/138 (64%), Gaps = 17/138 (12%)
Query: 487 AYKLEDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVGKLLVHPFCERKIPILADSF 546
+ K +DG +VVATTR ETL D AVAVHPEDERY HL+GK +V P R +PI+AD +
Sbjct: 220 SLKTQDGHDFLVVATTRPETLLGDTAVAVHPEDERYAHLIGKNIVLPITGRLVPIVADEY 279
Query: 547 VEKDFGTGAVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDY--------------- 591
VEKDFGTG VKI+P HD NDY++ +R +LP+I +FN+ ++ ++
Sbjct: 280 VEKDFGTGCVKITPAHDFNDYDLGKRHDLPIINIFNKNAEVLAEFEYIAKAGEQISDAIA 339
Query: 592 --GEFTGMKRFDARTRVT 607
++ G++RF AR ++
Sbjct: 340 APADYVGLERFAARKKLV 357
>sp|Q3A253|SYV_PELCD Valine--tRNA ligase OS=Pelobacter carbinolicus (strain DSM 2380 /
Gra Bd 1) GN=valS PE=3 SV=1
Length = 899
Score = 244 bits (624), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 142/377 (37%), Positives = 193/377 (51%), Gaps = 85/377 (22%)
Query: 230 EKNPKGKFVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAGIATQ 289
E +PK F +VIPPPNVTG LH+GHAL N ++D + RW RM G LW PG DHAGIATQ
Sbjct: 46 ENSPKNPFSIVIPPPNVTGVLHMGHALNNTLQDILARWKRMDGHEVLWQPGTDHAGIATQ 105
Query: 290 VVVEKKLWREEKKTRHEIGREKFIEKVWEWKKEKGDRIYEQMKLMGSSLDWDRACFTMDP 349
VVEK+L E +RH++GRE F+++VW+W+ E G +I Q+K +G+S DW+R FTMD
Sbjct: 106 NVVEKQL-AAEGSSRHDLGREGFVDRVWQWRTESGGQIINQLKRLGASCDWERERFTMDE 164
Query: 350 KLSRAVTEAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVDKVELTGRTPLRVPGYANP 409
LSRAV E FV L+E G IYR RL++W +A+SD+EV+ + G
Sbjct: 165 GLSRAVREVFVTLYEEGLIYRDNRLINWCPRCHTALSDLEVEHQDQKGN----------- 213
Query: 410 VDFGVLASFAYKLDDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVDKVELTGRTPL 469
L Y + +VVATTR ET+ D AVAVHPEDERY L+ K +
Sbjct: 214 -----LWHLRYPVVGTDRHLVVATTRPETMLGDTAVAVHPEDERYADLIGKFIMLPLMDR 268
Query: 470 RVPGYANPVDFGVLASFAYKLEDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVGKL 529
++P ++A ++ F AV + P
Sbjct: 269 QIP-------------------------IIADEYVDKEFGSGAVKITP------------ 291
Query: 530 LVHPFCERKIPILADSFVEKDFGTGAVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIG 589
H F DF E+ +R +L I +F+E GV+ G
Sbjct: 292 -AHDF--------------NDF----------------EIGKRHDLEFINIFDESGVVNG 320
Query: 590 DYGEFTGMKRFDARTRV 606
+ G + G++RF+ARTRV
Sbjct: 321 NGGRYQGLERFEARTRV 337
Score = 149 bits (377), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 93/250 (37%), Positives = 122/250 (48%), Gaps = 89/250 (35%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
+AEKA++AV+TG+ +IIP KT+++W+ N RDWCISRQ+WWGHRIPA++ + +
Sbjct: 382 LAEKAIEAVQTGQTRIIPQQWEKTYFEWMFNIRDWCISRQIWWGHRIPAWFCAACN---- 437
Query: 61 PKNVTEYELWVSGRSKEEAEQKAISKFNVTQADISLRQDEDVLDTWFSSGLFPFSVFGWP 120
E+ VS + A S T+ LRQ+ DVLDTWFSS L+PFS GWP
Sbjct: 438 -------EVTVS-----REDPTACSHCGATE----LRQETDVLDTWFSSALWPFSTMGWP 481
Query: 121 DKQ------------------------RLSANGI-------HSEVFLHPIVRDAHGRKMS 149
DK R+ G+ +V++H +VRDA G+KMS
Sbjct: 482 DKTVALEKFYPTSCLVTGFDILFFWVARMMMMGLKFMGQVPFKDVYIHALVRDAQGQKMS 541
Query: 150 KSLGNVIDPLDVVKGISLAGLQGRLLQDSNLEAAERQRAADGQKRDYPQGIPECGTDALR 209
KS GNVIDPL V I E GTDA R
Sbjct: 542 KSKGNVIDPLTV--------------------------------------IDEYGTDAFR 563
Query: 210 FALAAYMSQG 219
F LAA+ +QG
Sbjct: 564 FTLAAFAAQG 573
Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%)
Query: 602 ARTRVTELISLSISSQGLIKVDKEIERLNKKEEYLKQVIAKLKDQAAAEDYATKVPENVR 661
A T+V I + + GLI +D+E +RLNK+ +++ + + + E + K P V
Sbjct: 812 AATQVAGDIEILLPLAGLIDLDEEQKRLNKEIAKVEKDVLMFSKKLSNESFLAKAPAAVL 871
Query: 662 TQNSEKLSEAEGELSRLPAALAALKLIQ 689
++ +KL++AE +LS L L L +Q
Sbjct: 872 EKDRQKLADAEEKLSILKQGLEKLAALQ 899
>sp|Q9HXH0|SYV_PSEAE Valine--tRNA ligase OS=Pseudomonas aeruginosa (strain ATCC 15692 /
PAO1 / 1C / PRS 101 / LMG 12228) GN=valS PE=3 SV=1
Length = 950
Score = 244 bits (624), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 158/437 (36%), Positives = 216/437 (49%), Gaps = 105/437 (24%)
Query: 229 GEKNPKGKFVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAGIAT 288
GE P + ++IPPPNVTG+LH+GH NA+ D++ R+ RM+G+ TLW PG DHAGIAT
Sbjct: 28 GEGQP---YTIMIPPPNVTGSLHMGHGFNNAIMDALIRYRRMQGRNTLWQPGTDHAGIAT 84
Query: 289 QVVVEKKLWREEKKTRHEIGREKFIEKVWEWKKEKGDRIYEQMKLMGSSLDWDRACFTMD 348
Q+VVE++L + +RH++GREKF+EKVWEWK++ G I Q++ +GSS+DW R FTMD
Sbjct: 85 QMVVERQL-GAQGVSRHDLGREKFLEKVWEWKEQSGGNITRQIRRLGSSVDWSRERFTMD 143
Query: 349 PKLSRAVTEAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVDKVELTGRTPLRVPGYAN 408
LS ++K A + D + G+
Sbjct: 144 DGLSE--------------------------AVKEAFVRLHEDGLIYRGK---------- 167
Query: 409 PVDFGVLASFAYKLDDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVDKVELTGRTP 468
+V T+L T +D+ V H E HL R P
Sbjct: 168 -------------------RLVNWDTKLHTAISDLEVENHDEKGHLWHL--------RYP 200
Query: 469 LRVPGYANPVDFGVLASFAYKLEDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVGK 528
L V G K +G +VVATTR ETL D AVAVHPEDERY L+G+
Sbjct: 201 L-VNGA--------------KTSEGLDYLVVATTRPETLLGDAAVAVHPEDERYAKLIGQ 245
Query: 529 LLVHPFCERKIPILADSFVEKDFGTGAVKISPGHDHNDYEVAQRLNLPLITVFNEEGVII 588
P R IPI+AD +V+++FGTG VKI+P HD NDYEV +R +LPLI +F++ ++
Sbjct: 246 FAELPIVGRHIPIIADEYVDREFGTGCVKITPAHDFNDYEVGKRHDLPLINIFDKNAAVL 305
Query: 589 GDYGEF------------------TGMKRFDARTRVTELISLSISSQGLI-KVDKEIERL 629
F GM RF AR + I + GL+ KVD ++
Sbjct: 306 AQAQVFHLDGSVNPNLDPSLPQSYAGMDRFAAR----KAIVAEFEAMGLLEKVDDHALKV 361
Query: 630 NKKEEYLKQVIAKLKDQ 646
K + + L DQ
Sbjct: 362 PKGDRSGTVIEPWLTDQ 378
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/257 (35%), Positives = 128/257 (49%), Gaps = 58/257 (22%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
+AE A+ AV+ G ++ +P + ++ W+ + +DWCISRQLWWGHRIPA+Y +
Sbjct: 386 LAEDAIAAVEDGRIQFVPKQYENMYFSWMRDIQDWCISRQLWWGHRIPAWY-------DE 438
Query: 61 PKNVTEYELWVSGRSKEEAEQKAISKFNVTQADISLRQDEDVLDTWFSSGLFPFSVFGWP 120
NV V R+K + +A LRQDEDVLDTWFSSGL+ FS GWP
Sbjct: 439 AGNVYVGRDEVEVRTKHKLGNEA-----------ELRQDEDVLDTWFSSGLWTFSTLGWP 487
Query: 121 DKQ------------------------RLSANGIH-------------SEVFLHPIVRDA 143
+ R+ +H V++H +VRD
Sbjct: 488 QQTEFLKTFHPTDVLVTGFDIIFFWVARMIMLTMHLVKNPDGTPQIPFKTVYVHGLVRDG 547
Query: 144 HGRKMSKSLGNVIDPLDVVKGISL-AGLQGRLLQDSNLEAAERQRAADGQKRDYPQGIPE 202
G+KMSKS GNV+DPLD+V GI L LQ R ++ ++ A + ++P+GI
Sbjct: 548 QGQKMSKSKGNVLDPLDIVDGIDLDTLLQKR--TSGMMQPKLAEKIAKQTRAEFPEGIAS 605
Query: 203 CGTDALRFALAAYMSQG 219
GTDALRF + S G
Sbjct: 606 YGTDALRFTFCSLASTG 622
Score = 34.7 bits (78), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 38/69 (55%)
Query: 610 ISLSISSQGLIKVDKEIERLNKKEEYLKQVIAKLKDQAAAEDYATKVPENVRTQNSEKLS 669
+ + + GLI E+ RL+K+ + L+ + ++ + + E + K P +V + KL+
Sbjct: 872 MEVLVPMAGLIDKSAELGRLDKEIQRLEGEVKRVGGKLSNEGFVAKAPADVIEKERAKLA 931
Query: 670 EAEGELSRL 678
EAE L++L
Sbjct: 932 EAEQALAKL 940
>sp|Q0BTM1|SYV_GRABC Valine--tRNA ligase OS=Granulibacter bethesdensis (strain ATCC
BAA-1260 / CGDNIH1) GN=valS PE=3 SV=1
Length = 896
Score = 240 bits (613), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 123/245 (50%), Positives = 158/245 (64%), Gaps = 20/245 (8%)
Query: 237 FVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAGIATQVVVEKKL 296
F ++IPPPNVTG+LH+GHALT ++DS+ RW RM+G+ LW PG DHAGIATQ+VVE+ L
Sbjct: 41 FTIMIPPPNVTGSLHMGHALTFTLQDSLVRWRRMQGRDVLWQPGTDHAGIATQMVVERLL 100
Query: 297 WREEKKTRHEIGREKFIEKVWEWKKEKGDRIYEQMKLMGSSLDWDRACFTMDPKLSRAVT 356
E R EIGR+ F+++VW WK E G I Q++ +G+SLDW R FTMD LS AV
Sbjct: 101 ASEGSPGRREIGRDAFLDRVWRWKAESGGNITHQLRRLGASLDWGRERFTMDEGLSAAVR 160
Query: 357 EAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVDKVELTGRTPLRVPGYANPVDFGVLA 416
+ FV L+ G IYR RLV+W L++AISD+EV+ E+ G L
Sbjct: 161 DVFVTLYRQGLIYRDRRLVNWDPQLQTAISDLEVESREVRGN----------------LW 204
Query: 417 SFAYKLDDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVDK---VELTG-RTPLRVP 472
Y L+DG G I+VATTR ET+ D AVAVHPEDERY L+ K + LTG R P+
Sbjct: 205 HIRYPLEDGEGSIIVATTRPETMLGDSAVAVHPEDERYTALIGKCVILPLTGRRIPIVAD 264
Query: 473 GYANP 477
Y++P
Sbjct: 265 TYSDP 269
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/141 (46%), Positives = 87/141 (61%), Gaps = 15/141 (10%)
Query: 481 GVLASFAYKLEDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVGKLLVHPFCERKIP 540
G L Y LEDG G I+VATTR ET+ D AVAVHPEDERY L+GK ++ P R+IP
Sbjct: 201 GNLWHIRYPLEDGEGSIIVATTRPETMLGDSAVAVHPEDERYTALIGKCVILPLTGRRIP 260
Query: 541 ILADSFVEKDFGTGAVKISPGHDHNDYEVAQRLNLPLITVFNEEGVI------------I 588
I+AD++ + + GTGAVKI+P HD ND+ V +R +LP+ ++ + EG I I
Sbjct: 261 IVADTYSDPEKGTGAVKITPAHDFNDFAVGRRHDLPMPSIMDREGRITLAEITCTEATDI 320
Query: 589 GDYGEFTGM---KRFDARTRV 606
D TG+ +RF AR +
Sbjct: 321 ADPAFVTGLEGQERFAARKAI 341
Score = 122 bits (307), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 102/195 (52%), Gaps = 51/195 (26%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
+A+ AV AV++G+ + +P T++ WL + + WCISRQLWWGHRIPA+Y
Sbjct: 386 LAKPAVAAVESGDTRFVPKQWENTFFAWLRDIQPWCISRQLWWGHRIPAWYAP------- 438
Query: 61 PKNVTEYELWVSGRSKEEAEQKAISKFNVTQADISLRQDEDVLDTWFSSGLFPFSVFGWP 120
+ ++V+ ++E S+ +L QDEDVLDTWFSS L+PFS GWP
Sbjct: 439 -----DGSVYVAATAEEAQAAYGGSE--------TLTQDEDVLDTWFSSALWPFSTLGWP 485
Query: 121 DKQ------------------------RLSANGIH-------SEVFLHPIVRDAHGRKMS 149
+ R+ G+H +V++H +VRD G+KMS
Sbjct: 486 EDDSILSRYYPTDVLITGFDIIFFWVARMMMMGLHIQKQVPFRDVYIHGLVRDERGQKMS 545
Query: 150 KSLGNVIDPLDVVKG 164
KS GNVIDPL +++
Sbjct: 546 KSKGNVIDPLALIEA 560
>sp|Q3SL86|SYV_THIDA Valine--tRNA ligase OS=Thiobacillus denitrificans (strain ATCC
25259) GN=valS PE=3 SV=1
Length = 912
Score = 239 bits (609), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 117/224 (52%), Positives = 151/224 (67%), Gaps = 17/224 (7%)
Query: 237 FVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAGIATQVVVEKKL 296
+ +++PPPNVTGTLH+GHA + + D++TR++RM G TLW PG DHAGIATQ+VVE++L
Sbjct: 37 YCIMLPPPNVTGTLHMGHAFQHTLMDALTRYHRMSGDNTLWQPGTDHAGIATQIVVERQL 96
Query: 297 WREEKKTRHEIGREKFIEKVWEWKKEKGDRIYEQMKLMGSSLDWDRACFTMDPKLSRAVT 356
+ +RH++GREKF+EKVWEWK G I QM+ +G+S DW R FTMD LS+AVT
Sbjct: 97 -DAQNISRHDLGREKFLEKVWEWKAHSGSTITRQMRRLGTSPDWSRERFTMDAGLSKAVT 155
Query: 357 EAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVDKVELTGRTPLRVPGYANPVDFGVLA 416
E FV L+ G IYR +RLV+W L +A+SD+EV E + G +
Sbjct: 156 EVFVRLYREGLIYRGKRLVNWDPVLGTAVSDLEVVSTE----------------EDGFIW 199
Query: 417 SFAYKLDDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVDK 460
Y L+DGSG + VATTR ETL D AVAVHPEDERY HL+ K
Sbjct: 200 EINYPLEDGSGHLTVATTRPETLLGDTAVAVHPEDERYAHLIGK 243
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/253 (37%), Positives = 139/253 (54%), Gaps = 59/253 (23%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
+A++ + AV +GELK +P++ T T+ QWLEN +DWC+SRQLWWGHRIPA+Y +
Sbjct: 367 LAKQGLAAVDSGELKFVPENWTTTYRQWLENIQDWCVSRQLWWGHRIPAWYDA------- 419
Query: 61 PKNVTEYELWVSGRSKEEAEQKAISKFNVTQADISLRQDEDVLDTWFSSGLFPFSVFGWP 120
+ E +V+ ++EEA ++A + L QD DVLDTWFSS L+PFS GWP
Sbjct: 420 -----DGEFYVA-HTEEEARKQAGGR--------ELTQDNDVLDTWFSSALWPFSTLGWP 465
Query: 121 DK-------------------------------QRLSANGIHSEVFLHPIVRDAHGRKMS 149
++ + L+ EV++ +VRD+ G+KMS
Sbjct: 466 EQTPELERYLPTSVLVTGFDIIFFWVARMVMMSKHLTGKVPFREVYVTGLVRDSEGQKMS 525
Query: 150 KSLGNVIDPLDVVKGISLAGLQGRLLQDSNLEAAERQRAADGQKR---DYPQGIPECGTD 206
KS GNV+DP+D++ GI++ L + Q ++AA +KR ++P GI GTD
Sbjct: 526 KSKGNVLDPIDLIDGIAVGDLVAKRTQG----LMNPKQAASIEKRTRKEFPDGIAAYGTD 581
Query: 207 ALRFALAAYMSQG 219
ALRF A+ + G
Sbjct: 582 ALRFTFASLATHG 594
Score = 132 bits (332), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 66/141 (46%), Positives = 92/141 (65%), Gaps = 5/141 (3%)
Query: 481 GVLASFAYKLEDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVGKLLVHPFCERKIP 540
G + Y LEDGSG + VATTR ETL D AVAVHPEDERY HL+GK + P ER IP
Sbjct: 196 GFIWEINYPLEDGSGHLTVATTRPETLLGDTAVAVHPEDERYAHLIGKHVRLPIAERSIP 255
Query: 541 ILADSFVEKDFGTGAVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDY-GEFTGMKR 599
++AD +V+++FGTG VKI+P HD ND++V QR L I+V + + E+ G+ R
Sbjct: 256 VIADEYVDREFGTGVVKITPAHDFNDWQVGQRHKLMAISVLTLDAKMNELCPTEYQGLDR 315
Query: 600 FDARTRVTELISLSISSQGLI 620
+DAR + + ++ ++GL+
Sbjct: 316 YDARQTLLD----ALQAKGLL 332
>sp|Q606C1|SYV_METCA Valine--tRNA ligase OS=Methylococcus capsulatus (strain ATCC 33009
/ NCIMB 11132 / Bath) GN=valS PE=3 SV=1
Length = 921
Score = 238 bits (608), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 131/266 (49%), Positives = 170/266 (63%), Gaps = 25/266 (9%)
Query: 220 ERTGRRKSIGEKNPKGKFVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNP 279
E +G +GE P + ++IPPPNVTG+LH+GHA + V D + R++RMKG TLW
Sbjct: 19 EASGFFAPVGEGAP---YCIMIPPPNVTGSLHMGHAFQDTVMDVLIRYHRMKGDRTLWQA 75
Query: 280 GCDHAGIATQVVVEKKLWREEKKTRHEIGREKFIEKVWEWKKEKGDRIYEQMKLMGSSLD 339
G DHAGIATQ+VVE++L +TRH++GRE FIE+VW+WK+ G I Q++ MG+SLD
Sbjct: 76 GTDHAGIATQMVVERQL-AGVGQTRHDLGREAFIERVWQWKETSGGTITRQLRRMGASLD 134
Query: 340 WDRACFTMDPKLSRAVTEAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVDKVELTGRT 399
W R FT+D LSRAV E FV L+E G IYR +RLV+W L +A+SD+EV E G
Sbjct: 135 WSRERFTLDEGLSRAVREVFVRLYEEGLIYRGKRLVNWDPVLHTAVSDLEVISEEEQGH- 193
Query: 400 PLRVPGYANPVDFGVLASFAYKLDDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVD 459
L Y L DGSG +VVATTR ET+ D AVAVHPEDERY+HL+
Sbjct: 194 ---------------LWHMRYPLADGSGHLVVATTRPETMLGDTAVAVHPEDERYRHLIG 238
Query: 460 ---KVELTGR-TPLRVPGYANPVDFG 481
++ LTGR P+ Y +P +FG
Sbjct: 239 HSVRLPLTGREIPVIGDTYVDP-EFG 263
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/253 (41%), Positives = 144/253 (56%), Gaps = 56/253 (22%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
+A A++AV+ G ++ +P++ + T+YQW+ N +DWCISRQ+WWGHRIPA+Y
Sbjct: 365 LAGPAIKAVEEGRIRFVPENWSNTYYQWMYNIQDWCISRQIWWGHRIPAWYDG------- 417
Query: 61 PKNVTEYELWVSGRSKEEAEQKAISKFNVTQADISLRQDEDVLDTWFSSGLFPFSVFGWP 120
E ++V GRS+EE K + A I LRQDEDVLDTWFSS L+PFS GWP
Sbjct: 418 -----EGRVYV-GRSEEEVRAK-----HGLDASIPLRQDEDVLDTWFSSALWPFSTLGWP 466
Query: 121 DKQ------------------------RLSANGI-------HSEVFLHPIVRDAHGRKMS 149
+++ R+ G+ EV++H +VRDA G+KMS
Sbjct: 467 ERKPELDTFYPTSVLVTGFDIIFFWVARMIMMGLKFMGDVPFREVYIHGLVRDAEGQKMS 526
Query: 150 KSLGNVIDPLDVVKGISLAGLQGRLLQDSNLEAAERQRAADGQKR---DYPQGIPECGTD 206
KS GNV+DP+D++ GISL L + Q + Q AA +KR D+P+GIP GTD
Sbjct: 527 KSKGNVLDPIDLIDGISLEDLVAKRTQG----LMQPQMAARIEKRTRQDFPEGIPSYGTD 582
Query: 207 ALRFALAAYMSQG 219
ALRF A+ S G
Sbjct: 583 ALRFTFASLASTG 595
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 94/144 (65%), Gaps = 7/144 (4%)
Query: 481 GVLASFAYKLEDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVGKLLVHPFCERKIP 540
G L Y L DGSG +VVATTR ET+ D AVAVHPEDERY+HL+G + P R+IP
Sbjct: 192 GHLWHMRYPLADGSGHLVVATTRPETMLGDTAVAVHPEDERYRHLIGHSVRLPLTGREIP 251
Query: 541 ILADSFVEKDFGTGAVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDY---GEFTGM 597
++ D++V+ +FG+G VKI+P HD NDY + R LP+I++F++ I+ ++ G+
Sbjct: 252 VIGDTYVDPEFGSGCVKITPAHDFNDYAIGVRHALPMISIFDQGAAILPRADIPAKYHGL 311
Query: 598 KRFDARTRVTELISLSISSQGLIK 621
R++AR +L+ ++ GLI+
Sbjct: 312 DRYEAR----DLVVHDLNELGLIE 331
>sp|A5UBZ9|SYV_HAEIE Valine--tRNA ligase OS=Haemophilus influenzae (strain PittEE)
GN=valS PE=3 SV=1
Length = 954
Score = 237 bits (605), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 126/249 (50%), Positives = 159/249 (63%), Gaps = 13/249 (5%)
Query: 214 AYMSQGERTGRRKSIGEKNPKGKFVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGK 273
A E +G K G +N + + IPPPNVTG+LH+GHA + D++ R+NRM+G
Sbjct: 19 ALYQHWEESGYFKPSGNENAPS-YCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGH 77
Query: 274 TTLWNPGCDHAGIATQVVVEKKLWREEKKTRHEIGREKFIEKVWEWKKEKGDRIYEQMKL 333
TLW G DHAGIATQ+VVE+K+ EE KTRH+ GRE FI K+W+WK G I +QM+
Sbjct: 78 NTLWQAGTDHAGIATQMVVERKIGAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRR 137
Query: 334 MGSSLDWDRACFTMDPKLSRAVTEAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVDKV 393
+G+S+DW+R FTMD LS AV E FV LHE G IYR +RLV+W L +AISD+EV+
Sbjct: 138 LGNSIDWERERFTMDDGLSNAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENK 197
Query: 394 ELTGRT-PLRVPGYANPVDFGVLASFAYKLDDGSGEIVVATTRLETLFADVAVAVHPEDE 452
E G R P LA+ A K DG +VVATTR ET+ D AVAVHPEDE
Sbjct: 198 ESKGSLWHFRYP----------LANGA-KTADGKDYLVVATTRPETMLGDTAVAVHPEDE 246
Query: 453 RYKHLVDKV 461
RY+ L+ K
Sbjct: 247 RYQSLIGKT 255
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 138/260 (53%), Gaps = 64/260 (24%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
+A+ A++AV+ E++ +P + ++ W+ + +DWCISRQLWWGHRIPA+Y
Sbjct: 395 LADVAIKAVEDCEIQFVPKQYENLYFSWMRDIQDWCISRQLWWGHRIPAWY--------- 445
Query: 61 PKNVTEYELWVSGRSKEEAEQKAISKFNVTQADISLRQDEDVLDTWFSSGLFPFSVFGWP 120
TE ++V ++ E E + SK+N+ A + L+QDEDVLDTWFSSGL+ FS GWP
Sbjct: 446 ---DTEGNVYV---ARNETEVR--SKYNLDFA-VELKQDEDVLDTWFSSGLWTFSTLGWP 496
Query: 121 DKQ------------------------RLSANGIH-------------SEVFLHPIVRDA 143
++ R+ +H V++ ++RD
Sbjct: 497 EQTKELKMFHPTDVLITGFDIIFFWVARMIMFTMHFVKDENGKPQVPFKTVYVTGLIRDE 556
Query: 144 HGRKMSKSLGNVIDPLDVVKGISLAGL----QGRLLQDSNLEAAERQRAADGQKRDYPQG 199
G+KMSKS GNV+DP+D++ GISL L G ++Q E + A ++++ G
Sbjct: 557 QGQKMSKSKGNVLDPIDMIDGISLDDLLEKRTGNMMQPQLAE-----KIAKATRKEFADG 611
Query: 200 IPECGTDALRFALAAYMSQG 219
I GTDALRF LAA S G
Sbjct: 612 IAAHGTDALRFTLAALASNG 631
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 90/151 (59%), Gaps = 24/151 (15%)
Query: 481 GVLASFAY------KLEDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVGKLLVHPF 534
G L F Y K DG +VVATTR ET+ D AVAVHPEDERY+ L+GK +V P
Sbjct: 201 GSLWHFRYPLANGAKTADGKDYLVVATTRPETMLGDTAVAVHPEDERYQSLIGKTVVLPL 260
Query: 535 CERKIPILADSFVEKDFGTGAVKISPGHDHNDYEVAQRLNLPLITVFN------EEGVII 588
R+IPI+AD +V+++FGTG VKI+P HD NDYEV +R LP++ V +E II
Sbjct: 261 ANREIPIIADEYVDREFGTGVVKITPAHDFNDYEVGKRHGLPMVNVLTLNADIRDEAEII 320
Query: 589 GDYG------------EFTGMKRFDARTRVT 607
G G ++ G++RF AR ++
Sbjct: 321 GTDGKPLAGYEATIPADYRGLERFAARKKIV 351
>sp|Q0AIF2|SYV_NITEC Valine--tRNA ligase OS=Nitrosomonas eutropha (strain C91) GN=valS
PE=3 SV=1
Length = 917
Score = 237 bits (604), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 121/249 (48%), Positives = 167/249 (67%), Gaps = 18/249 (7%)
Query: 237 FVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAGIATQVVVEKKL 296
+ +++PPPNVTGTLH+GHA + + D++ R++RM G TLW PG DHAGIATQ+VVE++L
Sbjct: 37 YCIMLPPPNVTGTLHMGHAFQHTLMDALIRYHRMLGDNTLWQPGTDHAGIATQIVVERQL 96
Query: 297 WREEKKTRHEIGREKFIEKVWEWKKEKGDRIYEQMKLMGSSLDWDRACFTMDPKLSRAVT 356
+E K R ++GRE F+E+VW+WK+E G I QM+ MG+S DW R FTMD LSRAVT
Sbjct: 97 -DQEGKDRRQMGREAFLERVWQWKEESGSTITRQMRRMGTSCDWSRERFTMDEVLSRAVT 155
Query: 357 EAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVDKVELTGRTPLRVPGYANPVDFGVLA 416
E FV L+ G IYR +RLV+W L++A+SD+EV VE G + +L
Sbjct: 156 EVFVRLYREGLIYRGKRLVNWDPVLQTAVSDLEVVSVEEQGSL------------WHILY 203
Query: 417 SFAYKLDDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVD---KVELTGRT-PLRVP 472
F ++ ++G ++VATTR ET+ DVAVAVHPED RY+HL+ ++ L+ RT P+
Sbjct: 204 PFEHRAENGEKGLIVATTRPETMLGDVAVAVHPEDVRYRHLIGHHVRLPLSERTIPIIAD 263
Query: 473 GYANPVDFG 481
Y +P FG
Sbjct: 264 SYVDPA-FG 271
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/254 (37%), Positives = 137/254 (53%), Gaps = 61/254 (24%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
+A++ + AV++G+++ +P++ + QWLEN +DWCISRQLWWGHRIPA+Y +
Sbjct: 371 LAKQGLAAVESGQVRFVPENWAHVYNQWLENIQDWCISRQLWWGHRIPAWY------DED 424
Query: 61 PKNVTEYELWVSGRSKEEAEQKAISKFNVTQADISLRQDEDVLDTWFSSGLFPFSVFGWP 120
+ Y+L EEA +K K N L QDEDVLDTWFSS L+PFS GWP
Sbjct: 425 GNVIVAYDL-------EEA-RKLSGKEN-------LHQDEDVLDTWFSSALWPFSTLGWP 469
Query: 121 DKQ------------------------RLSANGIH-------SEVFLHPIVRDAHGRKMS 149
++ R+ +H EV++ ++RDA G+KMS
Sbjct: 470 EQTPELKTFLPGSVLVTGFDIIFFWVARMVMMSLHFTGEVPFREVYITGLIRDAEGQKMS 529
Query: 150 KSLGNVIDPLDVVKGISLAGLQGR----LLQDSNLEAAERQRAADGQKRDYPQGIPECGT 205
KS GNV+DPLD++ G++L L + L+ E+ E+ ++ +PQGIP G
Sbjct: 530 KSKGNVLDPLDLIDGVALTELIRKRTTGLMNPKQAESIEK-----ATRKQFPQGIPAFGA 584
Query: 206 DALRFALAAYMSQG 219
DALRF A+ S G
Sbjct: 585 DALRFTFASLASHG 598
Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/126 (50%), Positives = 86/126 (68%), Gaps = 1/126 (0%)
Query: 482 VLASFAYKLEDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVGKLLVHPFCERKIPI 541
+L F ++ E+G ++VATTR ET+ DVAVAVHPED RY+HL+G + P ER IPI
Sbjct: 201 ILYPFEHRAENGEKGLIVATTRPETMLGDVAVAVHPEDVRYRHLIGHHVRLPLSERTIPI 260
Query: 542 LADSFVEKDFGTGAVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYG-EFTGMKRF 600
+ADS+V+ FGTG VKI+P HD NDY+V R L +++F +G I + EF G+ RF
Sbjct: 261 IADSYVDPAFGTGCVKITPAHDFNDYQVGLRHKLIPLSIFTLDGKINDNAPVEFQGLDRF 320
Query: 601 DARTRV 606
DAR +V
Sbjct: 321 DARKKV 326
>sp|Q54I78|SYVM_DICDI Probable valine--tRNA ligase, mitochondrial OS=Dictyostelium
discoideum GN=valS2 PE=3 SV=2
Length = 1051
Score = 237 bits (604), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 159/238 (66%), Gaps = 1/238 (0%)
Query: 236 KFVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAGIATQVVVEKK 295
KF MV+PPPNVTG+LH+GH+LT ++DS+ R+NRM GK LW PG DH+GIATQV VEK+
Sbjct: 63 KFSMVLPPPNVTGSLHIGHSLTTTIQDSLIRYNRMMGKEVLWVPGLDHSGIATQVAVEKE 122
Query: 296 LWREEKKTRHEIGREKFIEKVWEWKKEKGDRIYEQMKLMGSSLDWDRACFTMDPKLSRAV 355
L ++ KTR ++GREKF+E+V++W + I Q+K+ GSSLDW R+ FT+D + + AV
Sbjct: 123 LQVKQGKTRFDLGREKFLEQVFQWTDQYSSNINNQLKITGSSLDWSRSVFTLDEQRNDAV 182
Query: 356 TEAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVDKVELTGRTPLRVPGYANPVDFGVL 415
AF+ + E G IYRS RLV+W L+S ISDIEVD + T L++ V+ G +
Sbjct: 183 QTAFIRMFEMGLIYRSTRLVNWCPYLQSVISDIEVDHKVIEKPTMLKLKSRKKSVEVGAI 242
Query: 416 ASFAYKLDDGS-GEIVVATTRLETLFADVAVAVHPEDERYKHLVDKVELTGRTPLRVP 472
+ AY ++D ++V+TTR ET+F D +A+HP DERYK K + R+P
Sbjct: 243 HNIAYMMEDPMLAPLIVSTTRPETIFGDTGLAIHPLDERYKDYHGKFAIHPFNHERIP 300
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 110/267 (41%), Positives = 149/267 (55%), Gaps = 48/267 (17%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
MA+K+++ V++GE+KIIP+ W +WL N +DWCISRQLWWG+ IPAY V D
Sbjct: 413 MADKSIEFVESGEIKIIPESFRADWSRWLTNIQDWCISRQLWWGNPIPAYRVIMIDKVTN 472
Query: 61 PK---NVTEYEL-----WVSGRSKEEAEQKAISKFNVTQA-DISLRQDEDVLDTWFSSGL 111
++TE E WV G++++EA + + + A + L +D+DVLDTWFSSGL
Sbjct: 473 EDLDIHLTETERLKQEKWVVGKNEKEARENVFKTYGIANAGEYRLEKDQDVLDTWFSSGL 532
Query: 112 FPFSVFGWPDKQRLSANGI--------------------------------------HSE 133
FP S GWP + S N
Sbjct: 533 FPISSMGWPTATKNSDNDNDFSRFLPLDVMETGSDILFFWVARMVMMCSTLNNGEVPFKT 592
Query: 134 VFLHPIVRDAHGRKMSKSLGNVIDPLDVVKGISLAGLQGRLLQDSNLEAAERQRAADGQK 193
+ LHP++RD+ GRKMSKSLGNVIDPL V+ GISL L+ L SNL E+ A G +
Sbjct: 593 ILLHPMIRDSQGRKMSKSLGNVIDPLHVINGISLQDLKEN-LSKSNLSQQEKVTATKGLE 651
Query: 194 RDYPQGIPECGTDALRFALAAYMSQGE 220
+++PQGIP+CGTD+LRF+LA Y G+
Sbjct: 652 KEFPQGIPQCGTDSLRFSLAQYPINGK 678
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 90/154 (58%), Gaps = 3/154 (1%)
Query: 458 VDKVELTGRTPLRVPGYANPVDFGVLASFAYKLEDGS-GEIVVATTRLETLFADVAVAVH 516
VD + T L++ V+ G + + AY +ED ++V+TTR ET+F D +A+H
Sbjct: 217 VDHKVIEKPTMLKLKSRKKSVEVGAIHNIAYMMEDPMLAPLIVSTTRPETIFGDTGLAIH 276
Query: 517 PEDERYKHLVGKLLVHPFCERKIPI-LADSFVEKDFGTGAVKISPGHDHNDYEVAQRLNL 575
P DERYK GK +HPF +IPI L D V ++ GTG VKI+P HD NDY+ QR +L
Sbjct: 277 PLDERYKDYHGKFAIHPFNHERIPIVLDDILVNREMGTGVVKITPAHDFNDYQCGQRHSL 336
Query: 576 PLITVFNEEGVII-GDYGEFTGMKRFDARTRVTE 608
P++ + N G + EF G+ R DAR+ V E
Sbjct: 337 PIVNILNSNGTLNENSTAEFEGVDRLDARSMVIE 370
>sp|B3GYI3|SYV_ACTP7 Valine--tRNA ligase OS=Actinobacillus pleuropneumoniae serotype 7
(strain AP76) GN=valS PE=3 SV=1
Length = 954
Score = 236 bits (602), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 121/226 (53%), Positives = 151/226 (66%), Gaps = 12/226 (5%)
Query: 237 FVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAGIATQVVVEKKL 296
+ + IPPPNVTG+LH+GHA + D++ R+NRM+G TLW G DHAGIATQ+VVE+K+
Sbjct: 41 YCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGNNTLWQTGTDHAGIATQMVVERKI 100
Query: 297 WREEKKTRHEIGREKFIEKVWEWKKEKGDRIYEQMKLMGSSLDWDRACFTMDPKLSRAVT 356
EE KTRH+ GRE FI K+W+WK G I +QM+ +G+S+DWDR FTMD LS AV
Sbjct: 101 AAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWDREHFTMDEGLSNAVK 160
Query: 357 EAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVDKVELTGRT-PLRVPGYANPVDFGVL 415
E FV LHE G IYR +RLV+W L +AISD+EV+ E G R P L
Sbjct: 161 EVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYP----------L 210
Query: 416 ASFAYKLDDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVDKV 461
A+ A K DG +VVATTR ET+ D AVAVHPEDERY+ L+ K
Sbjct: 211 ANGA-KTADGKDYLVVATTRPETVLGDTAVAVHPEDERYQSLIGKT 255
Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/260 (37%), Positives = 136/260 (52%), Gaps = 64/260 (24%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
+AE A +AV+ GE++ +P + ++ W+ + +DWCISRQLWWGHRIPA+Y +
Sbjct: 395 LAEVATKAVEDGEIQFVPKQYENLYFSWMRDIQDWCISRQLWWGHRIPAWY-------DE 447
Query: 61 PKNVTEYELWVSGRSKEEAEQKAISKFNVTQADISLRQDEDVLDTWFSSGLFPFSVFGWP 120
NV RS+EE QK + AD++LRQDEDVLDTWFSSGL+ FS GWP
Sbjct: 448 AGNV------YVARSEEEVRQK-----HNLPADLALRQDEDVLDTWFSSGLWTFSTLGWP 496
Query: 121 DKQ------------------------RLSANGIH-------------SEVFLHPIVRDA 143
++ R+ +H V++ ++RD
Sbjct: 497 EQTKELKMFHPTDVLITGFDIIFFWVARMIMFTMHFVKDENGKPQVPFKTVYVTGLIRDE 556
Query: 144 HGRKMSKSLGNVIDPLDVVKGISLAGL----QGRLLQDSNLEAAERQRAADGQKRDYPQG 199
G+KMSKS GNV+DP+D++ GISL L G ++Q E + A ++++ G
Sbjct: 557 QGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAE-----KIAKATRKEFENG 611
Query: 200 IPECGTDALRFALAAYMSQG 219
I GTDALRF LAA S G
Sbjct: 612 IAAHGTDALRFTLAALASNG 631
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 89/151 (58%), Gaps = 24/151 (15%)
Query: 481 GVLASFAY------KLEDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVGKLLVHPF 534
G L F Y K DG +VVATTR ET+ D AVAVHPEDERY+ L+GK +V P
Sbjct: 201 GSLWHFRYPLANGAKTADGKDYLVVATTRPETVLGDTAVAVHPEDERYQSLIGKTVVLPL 260
Query: 535 CERKIPILADSFVEKDFGTGAVKISPGHDHNDYEVAQRLNLPLITVFN------EEGVII 588
R+IPI+AD +V+++FGTG VKI+P HD NDYEV +R LP++ V E II
Sbjct: 261 ANREIPIVADEYVDREFGTGVVKITPAHDFNDYEVGKRHGLPMVNVMTMNADIRAEAEII 320
Query: 589 GDYG------------EFTGMKRFDARTRVT 607
G G ++ G++RF AR +V
Sbjct: 321 GTDGKPLTTYEAKIPADYQGLERFAARKKVV 351
Score = 37.7 bits (86), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 39/77 (50%)
Query: 610 ISLSISSQGLIKVDKEIERLNKKEEYLKQVIAKLKDQAAAEDYATKVPENVRTQNSEKLS 669
+ + I G I + E+ RL K+ E ++ I +++++ E + K PE V + EK+
Sbjct: 876 VEVLIPMAGFINKEAELARLTKEIEKMRGEITRIENKLGNEAFVAKAPEAVIAKEREKMQ 935
Query: 670 EAEGELSRLPAALAALK 686
E + L +L A++
Sbjct: 936 EYQNGLEKLQTQYQAIE 952
>sp|Q7VN93|SYV_HAEDU Valine--tRNA ligase OS=Haemophilus ducreyi (strain 35000HP / ATCC
700724) GN=valS PE=3 SV=1
Length = 961
Score = 236 bits (602), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 120/240 (50%), Positives = 155/240 (64%), Gaps = 10/240 (4%)
Query: 237 FVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAGIATQVVVEKKL 296
+ + IPPPNVTG+LH+GHA + D++ R+NRM+G TLW G DHAGIATQ+VVE+K+
Sbjct: 41 YCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGNNTLWQAGTDHAGIATQMVVERKI 100
Query: 297 WREEKKTRHEIGREKFIEKVWEWKKEKGDRIYEQMKLMGSSLDWDRACFTMDPKLSRAVT 356
EE KTRH+ GRE FI K+W+WK G I +QM+ +G+S+DW R FTMD LS AV
Sbjct: 101 AAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWQRERFTMDDGLSNAVK 160
Query: 357 EAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVDKVELTGRTPLRVPGYANPVDFGVLA 416
E FV LHE G IYR +RLV+W L +AISD+EV+ E G + + P+ GV
Sbjct: 161 EVFVRLHEQGLIYRGKRLVNWDPKLHTAISDLEVENKESKG----SLWHFRYPLSNGV-- 214
Query: 417 SFAYKLDDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVDKVELTGRTPLRVPGYAN 476
K DG ++VATTR ET+ D AVAVHPEDERY+ L+ K L +P A+
Sbjct: 215 ----KTADGKDYLIVATTRPETVLGDTAVAVHPEDERYQSLIGKTVLLPLANREIPIIAD 270
Score = 149 bits (376), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 97/262 (37%), Positives = 134/262 (51%), Gaps = 61/262 (23%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
+AE A +AV+ GE++ +P + ++ W+ + +DWCISRQLWWGHRIPA+Y +
Sbjct: 395 LAEVATKAVENGEIQFVPKQYENLYFSWMRDIQDWCISRQLWWGHRIPAWY-------DE 447
Query: 61 PKNVTEYELWVSGRSKEEAEQKAISKFNVTQADISLRQDEDVLDTWFSSGLFPFSVFGWP 120
NV ++ EAE + K N+ D+ L QDEDVLDTWFSSGL+ FS GWP
Sbjct: 448 SGNVY--------VARTEAEVRI--KHNLP-LDLPLTQDEDVLDTWFSSGLWTFSTLGWP 496
Query: 121 DKQR---------------------------LSANGIHSE----------VFLHPIVRDA 143
++ + + + I E V++ ++RD
Sbjct: 497 EQTKELKMFHTTDVLITGFDIIFFWVARMIMFTMHFIKDENGKPQVPFKTVYVTGLIRDE 556
Query: 144 HGRKMSKSLGNVIDPLDVVKGISLAGL----QGRLLQDSNLEA-AERQRAADGQKRDYPQ 198
G+KMSKS GNV+DP+D++ GISLA L G ++Q E A+ R P
Sbjct: 557 QGQKMSKSKGNVLDPIDMIDGISLADLLEKRTGNMMQPQLAEKIAKATRKEFAATPTLPA 616
Query: 199 -GIPECGTDALRFALAAYMSQG 219
GI GTDALRF LAA S G
Sbjct: 617 GGIAAHGTDALRFTLAALASNG 638
Score = 122 bits (307), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 89/150 (59%), Gaps = 24/150 (16%)
Query: 481 GVLASFAYKLE------DGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVGKLLVHPF 534
G L F Y L DG ++VATTR ET+ D AVAVHPEDERY+ L+GK ++ P
Sbjct: 201 GSLWHFRYPLSNGVKTADGKDYLIVATTRPETVLGDTAVAVHPEDERYQSLIGKTVLLPL 260
Query: 535 CERKIPILADSFVEKDFGTGAVKISPGHDHNDYEVAQRLNLPLITVFN------EEGVII 588
R+IPI+AD +V+++FGTG VKI+P HD NDYEV +R LP++ V + ++
Sbjct: 261 ANREIPIIADEYVDREFGTGVVKITPAHDFNDYEVGKRHALPMVNVMTMNADIRQTAEVL 320
Query: 589 GDYG------------EFTGMKRFDARTRV 606
G G ++ G++RF AR +V
Sbjct: 321 GPDGKPLNTYQAIIPADYQGLERFTARKKV 350
>sp|A3N2F0|SYV_ACTP2 Valine--tRNA ligase OS=Actinobacillus pleuropneumoniae serotype 5b
(strain L20) GN=valS PE=3 SV=1
Length = 954
Score = 236 bits (602), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 121/226 (53%), Positives = 151/226 (66%), Gaps = 12/226 (5%)
Query: 237 FVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAGIATQVVVEKKL 296
+ + IPPPNVTG+LH+GHA + D++ R+NRM+G TLW G DHAGIATQ+VVE+K+
Sbjct: 41 YCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGNNTLWQTGTDHAGIATQMVVERKI 100
Query: 297 WREEKKTRHEIGREKFIEKVWEWKKEKGDRIYEQMKLMGSSLDWDRACFTMDPKLSRAVT 356
EE KTRH+ GRE FI K+W+WK G I +QM+ +G+S+DWDR FTMD LS AV
Sbjct: 101 AAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWDRERFTMDEGLSNAVK 160
Query: 357 EAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVDKVELTGRT-PLRVPGYANPVDFGVL 415
E FV LHE G IYR +RLV+W L +AISD+EV+ E G R P L
Sbjct: 161 EVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYP----------L 210
Query: 416 ASFAYKLDDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVDKV 461
A+ A K DG +VVATTR ET+ D AVAVHPEDERY+ L+ K
Sbjct: 211 ANGA-KTADGKDYLVVATTRPETVLGDTAVAVHPEDERYQSLIGKT 255
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/260 (37%), Positives = 136/260 (52%), Gaps = 64/260 (24%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
+AE A +AV+ GE++ +P + ++ W+ + +DWCISRQLWWGHRIPA+Y +
Sbjct: 395 LAEVATKAVEDGEIQFVPKQYENLYFSWMRDIQDWCISRQLWWGHRIPAWY-------DE 447
Query: 61 PKNVTEYELWVSGRSKEEAEQKAISKFNVTQADISLRQDEDVLDTWFSSGLFPFSVFGWP 120
NV RS+EE QK + AD++LRQDEDVLDTWFSSGL+ FS GWP
Sbjct: 448 AGNV------YVARSEEEVRQK-----HNLPADLALRQDEDVLDTWFSSGLWTFSTLGWP 496
Query: 121 DKQ------------------------RLSANGIH-------------SEVFLHPIVRDA 143
++ R+ +H V++ ++RD
Sbjct: 497 EQTKELKMFHPTDVLITGFDIIFFWVARMIMFTMHFVKDENGKPQVPFKTVYVTGLIRDE 556
Query: 144 HGRKMSKSLGNVIDPLDVVKGISLAGL----QGRLLQDSNLEAAERQRAADGQKRDYPQG 199
G+KMSKS GNV+DP+D++ GISL L G ++Q E + A ++++ G
Sbjct: 557 QGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAE-----KIAKATRKEFENG 611
Query: 200 IPECGTDALRFALAAYMSQG 219
I GTDALRF LAA S G
Sbjct: 612 IAAHGTDALRFTLAALASNG 631
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 89/151 (58%), Gaps = 24/151 (15%)
Query: 481 GVLASFAY------KLEDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVGKLLVHPF 534
G L F Y K DG +VVATTR ET+ D AVAVHPEDERY+ L+GK +V P
Sbjct: 201 GSLWHFRYPLANGAKTADGKDYLVVATTRPETVLGDTAVAVHPEDERYQSLIGKTVVLPL 260
Query: 535 CERKIPILADSFVEKDFGTGAVKISPGHDHNDYEVAQRLNLPLITVFN------EEGVII 588
R+IPI+AD +V+++FGTG VKI+P HD NDYEV +R LP++ V E II
Sbjct: 261 ANREIPIVADEYVDREFGTGVVKITPAHDFNDYEVGKRHGLPMVNVMTMNADIRAEAEII 320
Query: 589 GDYG------------EFTGMKRFDARTRVT 607
G G ++ G++RF AR +V
Sbjct: 321 GTDGKPLTTYEAKIPADYQGLERFAARKKVV 351
Score = 37.7 bits (86), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 39/77 (50%)
Query: 610 ISLSISSQGLIKVDKEIERLNKKEEYLKQVIAKLKDQAAAEDYATKVPENVRTQNSEKLS 669
+ + I G I + E+ RL K+ E ++ I +++++ E + K PE V + EK+
Sbjct: 876 VEVLIPMAGFINKEAELARLTKEIEKMRGEITRIENKLGNEAFVAKAPEAVIAKEREKMQ 935
Query: 670 EAEGELSRLPAALAALK 686
E + L +L A++
Sbjct: 936 EYQNGLEKLQTQYQAIE 952
>sp|B0BR94|SYV_ACTPJ Valine--tRNA ligase OS=Actinobacillus pleuropneumoniae serotype 3
(strain JL03) GN=valS PE=3 SV=1
Length = 954
Score = 236 bits (601), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 121/226 (53%), Positives = 151/226 (66%), Gaps = 12/226 (5%)
Query: 237 FVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAGIATQVVVEKKL 296
+ + IPPPNVTG+LH+GHA + D++ R+NRM+G TLW G DHAGIATQ+VVE+K+
Sbjct: 41 YCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGNNTLWQTGTDHAGIATQMVVERKI 100
Query: 297 WREEKKTRHEIGREKFIEKVWEWKKEKGDRIYEQMKLMGSSLDWDRACFTMDPKLSRAVT 356
EE KTRH+ GRE FI K+W+WK G I +QM+ +G+S+DWDR FTMD LS AV
Sbjct: 101 AAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWDRERFTMDEGLSNAVK 160
Query: 357 EAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVDKVELTGRT-PLRVPGYANPVDFGVL 415
E FV LHE G IYR +RLV+W L +AISD+EV+ E G R P L
Sbjct: 161 EVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYP----------L 210
Query: 416 ASFAYKLDDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVDKV 461
A+ A K DG +VVATTR ET+ D AVAVHPEDERY+ L+ K
Sbjct: 211 ANGA-KTADGKDYLVVATTRPETVLGDTAVAVHPEDERYQSLIGKT 255
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/260 (37%), Positives = 136/260 (52%), Gaps = 64/260 (24%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
+AE A +AV+ GE++ +P + ++ W+ + +DWCISRQLWWGHRIPA+Y +
Sbjct: 395 LAEVATKAVEDGEIQFVPKQYENLYFSWMRDIQDWCISRQLWWGHRIPAWY-------DE 447
Query: 61 PKNVTEYELWVSGRSKEEAEQKAISKFNVTQADISLRQDEDVLDTWFSSGLFPFSVFGWP 120
NV RS+EE QK + AD++LRQDEDVLDTWFSSGL+ FS GWP
Sbjct: 448 AGNV------YVARSEEEVRQK-----HNLPADLALRQDEDVLDTWFSSGLWTFSTLGWP 496
Query: 121 DKQ------------------------RLSANGIH-------------SEVFLHPIVRDA 143
++ R+ +H V++ ++RD
Sbjct: 497 EQTKELKMFHPTDVLITGFDIIFFWVARMIMFTMHFVKDENGKPQVPFKTVYVTGLIRDE 556
Query: 144 HGRKMSKSLGNVIDPLDVVKGISLAGL----QGRLLQDSNLEAAERQRAADGQKRDYPQG 199
G+KMSKS GNV+DP+D++ GISL L G ++Q E + A ++++ G
Sbjct: 557 QGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAE-----KIAKATRKEFENG 611
Query: 200 IPECGTDALRFALAAYMSQG 219
I GTDALRF LAA S G
Sbjct: 612 IAAHGTDALRFTLAALASNG 631
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 89/151 (58%), Gaps = 24/151 (15%)
Query: 481 GVLASFAY------KLEDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVGKLLVHPF 534
G L F Y K DG +VVATTR ET+ D AVAVHPEDERY+ L+GK +V P
Sbjct: 201 GSLWHFRYPLANGAKTADGKDYLVVATTRPETVLGDTAVAVHPEDERYQSLIGKTVVLPL 260
Query: 535 CERKIPILADSFVEKDFGTGAVKISPGHDHNDYEVAQRLNLPLITVFN------EEGVII 588
R+IPI+AD +V+++FGTG VKI+P HD NDYEV +R LP++ V E II
Sbjct: 261 ANREIPIVADEYVDREFGTGVVKITPAHDFNDYEVGKRHGLPMVNVMTMNADIRAEAEII 320
Query: 589 GDYG------------EFTGMKRFDARTRVT 607
G G ++ G++RF AR +V
Sbjct: 321 GTDGKPLTTYEAKIPADYQGLERFAARKKVV 351
Score = 37.7 bits (86), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 39/77 (50%)
Query: 610 ISLSISSQGLIKVDKEIERLNKKEEYLKQVIAKLKDQAAAEDYATKVPENVRTQNSEKLS 669
+ + I G I + E+ RL K+ E ++ I +++++ E + K PE V + EK+
Sbjct: 876 VEVLIPMAGFINKEAELARLTKEIEKMRGEITRIENKLGNEAFVAKAPEAVIAKEREKMQ 935
Query: 670 EAEGELSRLPAALAALK 686
E + L +L A++
Sbjct: 936 EYQNGLEKLQTQYQAIE 952
>sp|Q4ZXI0|SYV_PSEU2 Valine--tRNA ligase OS=Pseudomonas syringae pv. syringae (strain
B728a) GN=valS PE=3 SV=1
Length = 948
Score = 235 bits (600), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 128/258 (49%), Positives = 170/258 (65%), Gaps = 21/258 (8%)
Query: 233 PKG---KFVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAGIATQ 289
P+G + ++IPPPNVTG+LH+GH NA+ D++ R+ RM+G+ TLW PG DHAGIATQ
Sbjct: 26 PQGVGDSYTIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRNTLWQPGTDHAGIATQ 85
Query: 290 VVVEKKLWREEKKTRHEIGREKFIEKVWEWKKEKGDRIYEQMKLMGSSLDWDRACFTMDP 349
++VE++L + +RHE+GREKF++K+WEWK E G I Q++ +GSS+DW R FTMD
Sbjct: 86 MLVERRL-EAQGVSRHELGREKFLDKIWEWKAESGGNISRQIRRLGSSVDWSRERFTMDD 144
Query: 350 KLSRAVTEAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVDKVELTGRT-PLRVPGYAN 408
LS AV EAFV LHE G IYR +RLV+W L +AISD+EV+ + G LR P
Sbjct: 145 GLSEAVKEAFVRLHEDGLIYRGKRLVNWDTKLHTAISDLEVENHDEKGHLWNLRYP---- 200
Query: 409 PVDFGVLASFAYKLDDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVDK---VELTG 465
LA A K +G ++VATTR ET+ D AVAV+PEDERYK L+ K + L G
Sbjct: 201 ------LADGA-KTAEGLDYLIVATTRPETMLGDAAVAVNPEDERYKALIGKFVELPLVG 253
Query: 466 -RTPLRVPGYANPVDFGV 482
R P+ Y +P +FG
Sbjct: 254 RRIPIIADDYCDP-EFGT 270
Score = 152 bits (384), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 137/260 (52%), Gaps = 64/260 (24%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
+AE A+ AV+ G + +P + ++ W+ + +DWCISRQLWWGHRIPA+Y D + K
Sbjct: 386 LAEPAIAAVEDGRIAFVPKQYENMYFSWMRDIQDWCISRQLWWGHRIPAWY----DESGK 441
Query: 61 PKNVTEYELWVSGRSKEEAEQKAISKFNVTQADISLRQDEDVLDTWFSSGLFPFSVFGWP 120
++V ++EAE +A + +++L+QD DVLDTWFSSGL+ FS GWP
Sbjct: 442 --------VYV---GRDEAEVRAKNNLG---PEVALQQDNDVLDTWFSSGLWTFSTLGWP 487
Query: 121 DKQR---------------------------LSANGIHSE----------VFLHPIVRDA 143
+K + L+ + + +E V++H +VRD
Sbjct: 488 EKTKALKTFHSTDVLVTGFDIIFFWVARMIMLTMHLVKNEDGTPQVPFKTVYVHGLVRDG 547
Query: 144 HGRKMSKSLGNVIDPLDVVKGISLAGLQGR----LLQDSNLEAAERQRAADGQKRDYPQG 199
G+KMSKS GNV+DPLD+V GI L L + L+Q + E+Q ++++ G
Sbjct: 548 QGQKMSKSKGNVLDPLDIVDGIDLETLVEKRTSGLMQPQLAKKIEKQ-----TRQEFADG 602
Query: 200 IPECGTDALRFALAAYMSQG 219
I GTDALRF + S G
Sbjct: 603 IASYGTDALRFTFCSLASTG 622
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 89/151 (58%), Gaps = 24/151 (15%)
Query: 481 GVLASFAYKLEDGSGE------IVVATTRLETLFADVAVAVHPEDERYKHLVGKLLVHPF 534
G L + Y L DG+ ++VATTR ET+ D AVAV+PEDERYK L+GK + P
Sbjct: 192 GHLWNLRYPLADGAKTAEGLDYLIVATTRPETMLGDAAVAVNPEDERYKALIGKFVELPL 251
Query: 535 CERKIPILADSFVEKDFGTGAVKISPGHDHNDYEVAQRLNLPLITVFNEEGVII------ 588
R+IPI+AD + + +FGTG VKI+P HD NDYEV +R NLPL+ +F++ ++
Sbjct: 252 VGRRIPIIADDYCDPEFGTGCVKITPAHDFNDYEVGKRHNLPLLNIFDKNANVLPAAQVF 311
Query: 589 ---GDYGE---------FTGMKRFDARTRVT 607
G E + G+ RF+AR ++
Sbjct: 312 NLDGTLNESVDGSLPAAYAGLDRFEARKQIV 342
>sp|Q3JC50|SYV_NITOC Valine--tRNA ligase OS=Nitrosococcus oceani (strain ATCC 19707 /
NCIMB 11848) GN=valS PE=3 SV=1
Length = 929
Score = 235 bits (599), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 127/260 (48%), Positives = 165/260 (63%), Gaps = 25/260 (9%)
Query: 229 GEKNPKGK---FVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAG 285
G P+GK + ++IPPPNVTG LH+GHA + + D++ R++RM+G TLW G DHAG
Sbjct: 22 GYFTPQGKDSSYCIMIPPPNVTGHLHMGHAFQSTIMDALIRYHRMRGDDTLWQVGADHAG 81
Query: 286 IATQVVVEKKLWREEKKTRHEIGREKFIEKVWEWKKEKGDRIYEQMKLMGSSLDWDRACF 345
IATQ+VVE +L E KTRH++GRE FI++VWEWK+ G I Q++ MG+S+DW R F
Sbjct: 82 IATQMVVENQL-NAEGKTRHDLGREAFIQRVWEWKEHSGGTITRQLRRMGTSVDWSRERF 140
Query: 346 TMDPKLSRAVTEAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVDKVELTGRTPLRVPG 405
TMD LS+AV E FV L++ G +YR +RLV+W L +AISD+EV E
Sbjct: 141 TMDEGLSQAVGEVFVRLYDEGLLYRGKRLVNWDSVLHTAISDLEVISEEENSH------- 193
Query: 406 YANPVDFGVLASFAYKLDDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVDK---VE 462
L Y L DGSG +VVATTR ET+ D AVAVHPED RY+HL+ K +
Sbjct: 194 ---------LWHMRYPLSDGSGHLVVATTRPETMLGDTAVAVHPEDPRYQHLIGKTVALP 244
Query: 463 LTGRT-PLRVPGYANPVDFG 481
LT RT P+ Y P +FG
Sbjct: 245 LTDRTIPVIADDYVEP-EFG 263
Score = 176 bits (447), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 100/254 (39%), Positives = 141/254 (55%), Gaps = 58/254 (22%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
+AE A+QAV+ G+++ IP++ K +++W+ N +DWCISRQ+WWGHRIPA+Y DP K
Sbjct: 363 LAEPAIQAVENGQIRFIPENWNKIYFEWMRNIQDWCISRQIWWGHRIPAWY----DPEGK 418
Query: 61 PKNVTEYELWVSGRSKEEAEQKAISKFNVTQADISLRQDEDVLDTWFSSGLFPFSVFGWP 120
++V+ E +A K+N+ D+ L QD DVLDTWFSS L+PFS GWP
Sbjct: 419 --------IYVA-----PTETQARQKYNLP-PDLPLEQDPDVLDTWFSSALWPFSTLGWP 464
Query: 121 DKQ------------------------RLSANGI-------HSEVFLHPIVRDAHGRKMS 149
+ R+ G+ EV++H +VRDA G+KMS
Sbjct: 465 EDTSLLRAFYPTSVLVTGFDIIFFWVARMIMMGLKFTGEVPFHEVYIHGLVRDAEGQKMS 524
Query: 150 KSLGNVIDPLDVVKGISLAGL----QGRLLQDSNLEAAERQRAADGQKRDYPQGIPECGT 205
KS GNV+DPLD++ GI L L G L+Q A +R ++++PQGIP G
Sbjct: 525 KSKGNVLDPLDLIDGIDLETLVTKRTGGLMQ-----PAMAKRIEKATRKEFPQGIPSFGC 579
Query: 206 DALRFALAAYMSQG 219
DALRF A ++G
Sbjct: 580 DALRFTFAILATRG 593
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 65/135 (48%), Positives = 90/135 (66%), Gaps = 5/135 (3%)
Query: 488 YKLEDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVGKLLVHPFCERKIPILADSFV 547
Y L DGSG +VVATTR ET+ D AVAVHPED RY+HL+GK + P +R IP++AD +V
Sbjct: 199 YPLSDGSGHLVVATTRPETMLGDTAVAVHPEDPRYQHLIGKTVALPLTDRTIPVIADDYV 258
Query: 548 EKDFGTGAVKISPGHDHNDYEVAQRLNLPLITVFNEEGVIIGDYGE-FTGMKRFDARTRV 606
E +FG+G VKI+P HD NDYEV QR LP I +F + + + E + + RF+AR
Sbjct: 259 EPEFGSGCVKITPAHDFNDYEVGQRHGLPFINIFTVDASLNENVPERYRNLDRFEAR--- 315
Query: 607 TELISLSISSQGLIK 621
+L+ + + GL++
Sbjct: 316 -KLVVADLEAAGLLE 329
>sp|Q4QKA4|SYV_HAEI8 Valine--tRNA ligase OS=Haemophilus influenzae (strain 86-028NP)
GN=valS PE=3 SV=1
Length = 954
Score = 235 bits (599), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/226 (53%), Positives = 151/226 (66%), Gaps = 12/226 (5%)
Query: 237 FVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAGIATQVVVEKKL 296
+ + IPPPNVTG+LH+GHA + D++ R+NRM+G TLW G DHAGIATQ+VVE+K+
Sbjct: 41 YCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGHNTLWQAGTDHAGIATQMVVERKI 100
Query: 297 WREEKKTRHEIGREKFIEKVWEWKKEKGDRIYEQMKLMGSSLDWDRACFTMDPKLSRAVT 356
EE KTRH+ GRE FI K+W+WK G I +QM+ +G+S+DW+R FTMD LS AV
Sbjct: 101 AAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWERERFTMDDGLSNAVK 160
Query: 357 EAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVDKVELTGRT-PLRVPGYANPVDFGVL 415
E FV LHE G IYR +RLV+W L +AISD+EV+ E G R P L
Sbjct: 161 EVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYP----------L 210
Query: 416 ASFAYKLDDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVDKV 461
A+ A K DG +VVATTR ET+ D AVAVHPEDERY+ L+ K
Sbjct: 211 ANGA-KTADGKDYLVVATTRPETMLGDTAVAVHPEDERYQSLIGKT 255
Score = 159 bits (403), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 94/260 (36%), Positives = 140/260 (53%), Gaps = 64/260 (24%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
+A+ A++AV+ GE++ +P + ++ W+ + +DWCISRQLWWGHRIPA+Y +
Sbjct: 395 LADVAIKAVEDGEIQFVPKQYENLYFSWMRDIQDWCISRQLWWGHRIPAWYDA------- 447
Query: 61 PKNVTEYELWVSGRSKEEAEQKAISKFNVTQADISLRQDEDVLDTWFSSGLFPFSVFGWP 120
E ++V+ R++EE SK+N+ A + L+QDEDVLDTWFSSGL+ FS GWP
Sbjct: 448 -----EGNVYVA-RNEEEVR----SKYNLDSA-VELKQDEDVLDTWFSSGLWTFSTLGWP 496
Query: 121 DKQ------------------------RLSANGIH-------------SEVFLHPIVRDA 143
++ R+ +H V++ ++RD
Sbjct: 497 EQTKELKMFHPTDVLITGFDIIFFWVARMIMFTMHFVKDENGKPQVPFKTVYVTGLIRDE 556
Query: 144 HGRKMSKSLGNVIDPLDVVKGISLAGL----QGRLLQDSNLEAAERQRAADGQKRDYPQG 199
G+KMSKS GNV+DP+D++ GISL L G ++Q E + A ++++ G
Sbjct: 557 QGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAE-----KIAKATRKEFADG 611
Query: 200 IPECGTDALRFALAAYMSQG 219
I GTDALRF LAA S G
Sbjct: 612 IAAHGTDALRFTLAALASNG 631
Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 91/151 (60%), Gaps = 24/151 (15%)
Query: 481 GVLASFAY------KLEDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVGKLLVHPF 534
G L F Y K DG +VVATTR ET+ D AVAVHPEDERY+ L+GK +V P
Sbjct: 201 GSLWHFRYPLANGAKTADGKDYLVVATTRPETMLGDTAVAVHPEDERYQSLIGKTVVLPL 260
Query: 535 CERKIPILADSFVEKDFGTGAVKISPGHDHNDYEVAQRLNLPLITVFN------EEGVII 588
R+IPI+AD +V+++FGTG VKI+P HD NDYEV +R NLP++ V +E II
Sbjct: 261 ANREIPIIADEYVDREFGTGVVKITPAHDFNDYEVGKRHNLPMVNVLTLNANIRDEAEII 320
Query: 589 GDYG------------EFTGMKRFDARTRVT 607
G G ++ G++RF AR ++
Sbjct: 321 GTDGKPLAGYEATIPADYRGLERFAARKKIV 351
>sp|Q89LR8|SYV_BRAJA Valine--tRNA ligase OS=Bradyrhizobium japonicum (strain USDA 110)
GN=valS PE=3 SV=1
Length = 958
Score = 234 bits (598), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 118/234 (50%), Positives = 156/234 (66%), Gaps = 14/234 (5%)
Query: 237 FVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAGIATQVVVEKKL 296
F +VIPPPNVTG+LH+GHAL N ++D + R+ RM+G+ LW PG DHAGIATQ+VVE++L
Sbjct: 38 FTIVIPPPNVTGSLHMGHALNNTLQDILCRFERMRGRDVLWQPGTDHAGIATQMVVERQL 97
Query: 297 WREEKKTRHEIGREKFIEKVWEWKKEKGDRIYEQMKLMGSSLDWDRACFTMDPKLSRAVT 356
++ R E+GREKF+E+VW+WK E GD I Q+K +G+S DW R FTMD LS+AV
Sbjct: 98 MERQQPGRREMGREKFLERVWQWKAESGDTIINQLKRLGASCDWSRERFTMDEGLSKAVI 157
Query: 357 EAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVDKVELTGRT-PLRVPGYANPVDFGVL 415
+ FV LH G IY+ +RLV+W L +AISD+EV + E+ G LR P +
Sbjct: 158 KVFVELHRDGLIYKDKRLVNWDTKLLTAISDLEVQQTEVKGSLWYLRYP----------I 207
Query: 416 ASFAYKLDDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVDK---VELTGR 466
+ +D S IVVATTR ET+ D VAVHP+DERY+ L+ K + L GR
Sbjct: 208 EGKTFSPEDPSSFIVVATTRPETMLGDTGVAVHPDDERYQKLIGKHVILPLVGR 261
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 118/257 (45%), Gaps = 80/257 (31%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
+A+ A+ AV++GE +P + KT+++W+EN + WCISRQLWWGH+IPA+Y P K
Sbjct: 391 LAKPAIAAVRSGETSFVPKNWEKTYFEWMENIQPWCISRQLWWGHQIPAWY----GPDGK 446
Query: 61 PKNVTEYELWVSGRSKEEAEQKAIS-------KFNVTQADISLRQDEDVLDTWFSSGLFP 113
E +S EQ+ I+ + + + + +DEDVLDTWFSS L+P
Sbjct: 447 VFVAETEEEAISHALGYYVEQEVITAEQGREMALDRNKREGFITRDEDVLDTWFSSALWP 506
Query: 114 FSVFGWPDK------------------------QRLSANGIH-------SEVFLHPIVRD 142
FS GWP+ R+ G+H S +++H +VRD
Sbjct: 507 FSTLGWPEDAPEVQRYYPTNALVTGFDIIFFWVARMMMMGLHFMKEVPFSTIYIHALVRD 566
Query: 143 AHGRKMSKSLGNVIDPLDVVKGISLAGLQGRLLQDSNLEAAERQRAADGQKRDYPQGIPE 202
G KMSKS GNVIDPL + I E
Sbjct: 567 EKGAKMSKSKGNVIDPLHL--------------------------------------IDE 588
Query: 203 CGTDALRFALAAYMSQG 219
G DALRF LAA +QG
Sbjct: 589 YGADALRFTLAAMAAQG 605
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 81/137 (59%), Gaps = 16/137 (11%)
Query: 488 YKLEDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVGKLLVHPFCERKIPILADSFV 547
+ ED S IVVATTR ET+ D VAVHP+DERY+ L+GK ++ P RK+ I+AD +
Sbjct: 212 FSPEDPSSFIVVATTRPETMLGDTGVAVHPDDERYQKLIGKHVILPLVGRKVEIVADDYS 271
Query: 548 EKDFGTGAVKISPGHDHNDYEVAQRLNLPLITVFNEEGVI----IGDY------------ 591
+ + G+GAVK++P HD ND+EV R L I+V ++EG + DY
Sbjct: 272 DPEKGSGAVKVTPAHDFNDFEVGNRHGLRRISVLDKEGCLDLLDNEDYLRDLPEGAAQFA 331
Query: 592 GEFTGMKRFDARTRVTE 608
EF + RF AR R+ E
Sbjct: 332 EEFNKVDRFVARKRIVE 348
>sp|A5UEN9|SYV_HAEIG Valine--tRNA ligase OS=Haemophilus influenzae (strain PittGG)
GN=valS PE=3 SV=1
Length = 954
Score = 234 bits (598), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/241 (50%), Positives = 156/241 (64%), Gaps = 12/241 (4%)
Query: 237 FVMVIPPPNVTGTLHLGHALTNAVEDSITRWNRMKGKTTLWNPGCDHAGIATQVVVEKKL 296
+ + IPPPNVTG+LH+GHA + D++ R+NRM+G TLW G DHAGIATQ+VVE+K+
Sbjct: 41 YCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGHNTLWQAGTDHAGIATQMVVERKI 100
Query: 297 WREEKKTRHEIGREKFIEKVWEWKKEKGDRIYEQMKLMGSSLDWDRACFTMDPKLSRAVT 356
EE KTRH+ GRE FI K+W+WK G I +QM+ +G+S+DW+R FTMD LS AV
Sbjct: 101 AAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWERERFTMDDGLSNAVK 160
Query: 357 EAFVILHEAGDIYRSERLVHWSCSLKSAISDIEVDKVELTGRT-PLRVPGYANPVDFGVL 415
E FV LHE G IYR +RLV+W L +AISD+EV+ E G R P L
Sbjct: 161 EVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYP----------L 210
Query: 416 ASFAYKLDDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVDKVELTGRTPLRVPGYA 475
A+ A K DG +VVATTR ET+ D AVAVHPEDERY+ L+ K + +P A
Sbjct: 211 ANDA-KTADGKDYLVVATTRPETMLGDTAVAVHPEDERYQSLIGKTVILPLANREIPIIA 269
Query: 476 N 476
+
Sbjct: 270 D 270
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/260 (36%), Positives = 141/260 (54%), Gaps = 64/260 (24%)
Query: 1 MAEKAVQAVKTGELKIIPDHHTKTWYQWLENNRDWCISRQLWWGHRIPAYYVSFNDPAKK 60
+A+ A++AV+ GE++ +P + ++ W+ + +DWCISRQLWWGHRIPA+Y +
Sbjct: 395 LADVAIKAVEDGEIQFVPKQYENLYFSWMRDIQDWCISRQLWWGHRIPAWYDA------- 447
Query: 61 PKNVTEYELWVSGRSKEEAEQKAISKFNVTQADISLRQDEDVLDTWFSSGLFPFSVFGWP 120
E ++V+ R++EE SK+N+ A + L+QDEDVLDTWFSSGL+ FS GWP
Sbjct: 448 -----EGNVYVA-RNEEEVR----SKYNLDSA-VELKQDEDVLDTWFSSGLWTFSTLGWP 496
Query: 121 DKQ------------------------RLSANGIH-------------SEVFLHPIVRDA 143
++ R+ +H V++ ++RD
Sbjct: 497 EQTKELKMFHPTDVLITGFDIIFFWVARMIMFTMHFVKDENGKPQVPFKTVYVTGLIRDE 556
Query: 144 HGRKMSKSLGNVIDPLDVVKGISLAGL----QGRLLQDSNLEAAERQRAADGQKRDYPQG 199
G+KMSKS GNV+DP+D++ GISL L G ++Q E + A ++++ +G
Sbjct: 557 QGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAE-----KIAKATRKEFAEG 611
Query: 200 IPECGTDALRFALAAYMSQG 219
I GTDALRF LAA S G
Sbjct: 612 IAAHGTDALRFTLAALASNG 631
Score = 130 bits (327), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 91/151 (60%), Gaps = 24/151 (15%)
Query: 481 GVLASFAY------KLEDGSGEIVVATTRLETLFADVAVAVHPEDERYKHLVGKLLVHPF 534
G L F Y K DG +VVATTR ET+ D AVAVHPEDERY+ L+GK ++ P
Sbjct: 201 GSLWHFRYPLANDAKTADGKDYLVVATTRPETMLGDTAVAVHPEDERYQSLIGKTVILPL 260
Query: 535 CERKIPILADSFVEKDFGTGAVKISPGHDHNDYEVAQRLNLPLITVFN------EEGVII 588
R+IPI+AD +V+++FGTG VKI+P HD NDYEV +R NLP++ V +E II
Sbjct: 261 ANREIPIIADEYVDREFGTGVVKITPAHDFNDYEVGKRHNLPMVNVLTLNANIRDEAEII 320
Query: 589 GDYG------------EFTGMKRFDARTRVT 607
G G ++ G++RF AR ++
Sbjct: 321 GTDGKPLAGYEATIPADYRGLERFAARKKIV 351
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 265,178,904
Number of Sequences: 539616
Number of extensions: 11830492
Number of successful extensions: 46261
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1761
Number of HSP's successfully gapped in prelim test: 89
Number of HSP's that attempted gapping in prelim test: 35122
Number of HSP's gapped (non-prelim): 7767
length of query: 689
length of database: 191,569,459
effective HSP length: 124
effective length of query: 565
effective length of database: 124,657,075
effective search space: 70431247375
effective search space used: 70431247375
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)