BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9440
(521 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P12785|FAS_RAT Fatty acid synthase OS=Rattus norvegicus GN=Fasn PE=1 SV=3
Length = 2505
Score = 320 bits (821), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 212/559 (37%), Positives = 294/559 (52%), Gaps = 74/559 (13%)
Query: 1 IALVDLLSSVGISPEGIVGHSDFNGEKRPVWYVFSGMGSQWAGMVKGLLHIPDFNGEKRP 60
IAL+DLL+S+G+ P+GI+GHS +G G G L ++
Sbjct: 561 IALIDLLTSMGLKPDGIIGHS---------------LGEVACGYADGCL------SQREA 599
Query: 61 VWYVFSGMGSQWAGMVKGLLHIPVFDQSIRKSAEALRGENFD---------LIPVI-TSE 110
V + + W G + D ++ + A G +++ ++P SE
Sbjct: 600 V------LAAYWRGQC-------IKDANLPAGSMAAVGLSWEECKQRCPPGVVPACHNSE 646
Query: 111 DADTF---EHILNSFVS------IAAVQVSENRHAFHSKYIAEAGPKLRSSLDRIIPAPK 161
D T + +N FV + A +V AFHS ++ P L +L ++I P+
Sbjct: 647 DTVTISGPQAAVNEFVEQLKQEGVFAKEVRTGGLAFHSYFMEGIAPTLLQALKKVIREPR 706
Query: 162 PRSARWISSSIPEDHWGTPLAQQSSPAYHVNNLLSPVLFYEALQHVPENAVVIEIAPHAL 221
PRSARW+S+SIPE W + LA+ SS Y+VNNL+SPVLF EAL HVPE+AVV+EIAPHAL
Sbjct: 707 PRSARWLSTSIPEAQWQSSLARTSSAEYNVNNLVSPVLFQEALWHVPEHAVVLEIAPHAL 766
Query: 222 LQAIIKRA-KPGAVSIGLTKRGAPDLPAHLLSGLGKLYNAGLQPRLNQLLPPVKFPVGRG 280
LQA++KR KP I L KR D L+ LGK++ G+ N L PPV+FPV RG
Sbjct: 767 LQAVLKRGVKPSCTIIPLMKRDHKDNLEFFLTNLGKVHLTGIDINPNALFPPVEFPVPRG 826
Query: 281 TPMIQSLVEWDHSTEWS--VASFAGKGGSRSGECVIDVDLSKE-EDAYLSGHAIDGRILF 337
TP+I ++WDHS W VA G S S V ++D S E D YL H IDGR+LF
Sbjct: 827 TPLISPHIKWDHSQTWDIPVAEDFPNGSSSSSATVYNIDASSESSDHYLVDHCIDGRVLF 886
Query: 338 PATGTEEAVEHFLQKIESIPRDDEFIALLH-EIHNTNIAGHPYRGE-------------F 383
P TG V L + S+ ++ + + H I P G F
Sbjct: 887 PGTGYLYLVWKTLARSLSLSLEETPVVFENVTFHQATIL--PRTGTVPLEVRLLEASHAF 944
Query: 384 ELCESGSVAVSGRIRTPEDVSKEQLDLPEL-TPAISSEMLELSSADVYKDLRLRGYDYSG 442
E+ +SG++ VSG++ ED + D PE+ PA S + L+ +VYK+LRLRGYDY
Sbjct: 945 EVSDSGNLIVSGKVYQWEDPDSKLFDHPEVPIPAESESVSRLTQGEVYKELRLRGYDYGP 1004
Query: 443 AFRGVSQSDNKGFTGKLDWTGNWISYIDTMLQFSILGINTRELYLPTRMQRVCIDPAKHK 502
F+GV ++ +G GKL W NW++++DTMLQ SILG + + L LPTR+ + IDPA H
Sbjct: 1005 HFQGVYEATLEGEQGKLLWKDNWVTFMDTMLQISILGFSKQSLQLPTRVTAIYIDPATHL 1064
Query: 503 ALVETLSGDKKTVPVAMYR 521
V L GD + V R
Sbjct: 1065 QKVYMLEGDTQVADVTTSR 1083
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 71/131 (54%), Gaps = 16/131 (12%)
Query: 1 IALVDLLSSVGISPEGIVGHSDFNGEKRPVWYVFSGMGSQWAGMVKGLLHIPDFNGEKRP 60
+A V +L+ + +P + F G Y G+ G V+ + +P +RP
Sbjct: 448 LAFVSMLNDIAATPTAAM---PFRG------YTVLGV----EGHVQEVQQVP---ASQRP 491
Query: 61 VWYVFSGMGSQWAGMVKGLLHIPVFDQSIRKSAEALRGENFDLIPVITSEDADTFEHILN 120
+W++ SGMG+QW GM L+ + F +SI +S EAL+ + ++ S D TF+ I++
Sbjct: 492 LWFICSGMGTQWRGMGLSLMRLDSFRESILRSDEALKPLGVKVSDLLLSTDEHTFDDIVH 551
Query: 121 SFVSIAAVQVS 131
SFVS+ A+Q++
Sbjct: 552 SFVSLTAIQIA 562
>sp|P49327|FAS_HUMAN Fatty acid synthase OS=Homo sapiens GN=FASN PE=1 SV=3
Length = 2511
Score = 314 bits (804), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 205/551 (37%), Positives = 290/551 (52%), Gaps = 59/551 (10%)
Query: 1 IALVDLLSSVGISPEGIVGHSDFNGEKRPVWYVFSGMGSQWAGMVKGLLHIPDFNGEKRP 60
I L+DLLS +G+ P+GIVGHS +G G G L +
Sbjct: 561 IGLIDLLSCMGLRPDGIVGHS---------------LGEVACGYADGCLSQEE------- 598
Query: 61 VWYVFSGMGSQWAGMVKGLLHIP---------VFDQSIRKSAEAL--RGENFDLIPVITS 109
+ + + W G H+P +++ ++ + N I+
Sbjct: 599 -----AVLAAYWRGQCIKEAHLPPGAMAAVGLSWEECKQRCPPGVVPACHNSKDTVTISG 653
Query: 110 EDADTFEHILN-SFVSIAAVQVSENRHAFHSKYIAEAGPKLRSSLDRIIPAPKPRSARWI 168
A FE + + A +V AFHS ++ P L L ++I PKPRSARW+
Sbjct: 654 PQAPVFEFVEQLRKEGVFAKEVRTGGMAFHSYFMEAIAPPLLQELKKVIREPKPRSARWL 713
Query: 169 SSSIPEDHWGTPLAQQSSPAYHVNNLLSPVLFYEALQHVPENAVVIEIAPHALLQAIIKR 228
S+SIPE W + LA+ SS Y+VNNL+SPVLF EAL HVPE+AVV+EIAPHALLQA++KR
Sbjct: 714 STSIPEAQWHSSLARTSSAEYNVNNLVSPVLFQEALWHVPEHAVVLEIAPHALLQAVLKR 773
Query: 229 A-KPGAVSIGLTKRGAPDLPAHLLSGLGKLYNAGLQPRLNQLLPPVKFPVGRGTPMIQSL 287
KP I L K+ D L+G+G+L+ +G+ N L PPV+FP RGTP+I L
Sbjct: 774 GLKPSCTIIPLMKKDHRDNLEFFLAGIGRLHLSGIDANPNALFPPVEFPAPRGTPLISPL 833
Query: 288 VEWDHSTEWSVAS---FAGKGGSRSGECVIDVDLSKEE-DAYLSGHAIDGRILFPATGTE 343
++WDHS W V + F GS S + ++D S E D YL H +DGR+LFPATG
Sbjct: 834 IKWDHSLAWDVPAAEDFPNGSGSPSA-AIYNIDTSSESPDHYLVDHTLDGRVLFPATGYL 892
Query: 344 EAVEHFLQK-----IESIPRDDEFIALLHE---IHNTNIAGHPYR-----GEFELCESGS 390
V L + +E +P E + +LH+ + T R FE+ E+G+
Sbjct: 893 SIVWKTLARALGLGVEQLPVVFEDV-VLHQATILPKTGTVSLEVRLLEASRAFEVSENGN 951
Query: 391 VAVSGRIRTPEDVSKEQLDLPELTPAISSEMLELSSADVYKDLRLRGYDYSGAFRGVSQS 450
+ VSG++ +D D PE +E L L+ A+VYK+LRLRGYDY F+G+ ++
Sbjct: 952 LVVSGKVYQWDDPDPRLFDHPESPTPNPTEPLFLAQAEVYKELRLRGYDYGPHFQGILEA 1011
Query: 451 DNKGFTGKLDWTGNWISYIDTMLQFSILGINTRELYLPTRMQRVCIDPAKHKALVETLSG 510
+G +G+L W NW+S++DTMLQ SILG LYLPTR+ + IDPA H+ + TL
Sbjct: 1012 SLEGDSGRLLWKDNWVSFMDTMLQMSILGSAKHGLYLPTRVTAIHIDPATHRQKLYTLQD 1071
Query: 511 DKKTVPVAMYR 521
+ V + R
Sbjct: 1072 KAQVADVVVSR 1082
Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 48/73 (65%)
Query: 58 KRPVWYVFSGMGSQWAGMVKGLLHIPVFDQSIRKSAEALRGENFDLIPVITSEDADTFEH 117
+RP+W++ SGMG+QW GM L+ + F SI +S EA++ + ++ S D TF+
Sbjct: 489 ERPLWFICSGMGTQWRGMGLSLMRLDRFRDSILRSDEAVKPFGLKVSQLLLSTDESTFDD 548
Query: 118 ILNSFVSIAAVQV 130
I++SFVS+ A+Q+
Sbjct: 549 IVHSFVSLTAIQI 561
>sp|P19096|FAS_MOUSE Fatty acid synthase OS=Mus musculus GN=Fasn PE=1 SV=2
Length = 2504
Score = 309 bits (791), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 209/556 (37%), Positives = 291/556 (52%), Gaps = 68/556 (12%)
Query: 1 IALVDLLSSVGISPEGIVGHSDFNGEKRPVWYVFSGMGSQWAGMVKGLLHIPDFNGEKRP 60
IAL+DLL+SVG+ P+GI+GHS +G G G L ++
Sbjct: 561 IALIDLLTSVGLKPDGIIGHS---------------LGEVACGYADGCL------SQREA 599
Query: 61 VWYVFSGMGSQWAGMVKGLLHIPVFDQS-IRKSAEALRGEN-FDLIPVI-TSEDADTF-- 115
V + + W G H+P + + S E + ++P SED T
Sbjct: 600 V------LAAYWRGQCIKDAHLPPGSMAAVGLSWEECKQRCPAGVVPACHNSEDTVTISG 653
Query: 116 -EHILNSFVS------IAAVQVSENRHAFHSKYIAEAGPKLRSSLDRIIPAPKPRSARWI 168
+ +N FV + A +V AFHS ++ P L +L ++I P+PRSARW+
Sbjct: 654 PQAAVNEFVEQLKQEGVFAKEVRTGGLAFHSYFMEGIAPTLLQALKKVIREPRPRSARWL 713
Query: 169 SSSIPEDHWGTPLAQQSSPAYHVNNLLSPVLFYEALQHVPENAVVIEIAPHALLQAIIKR 228
S+SIPE W + LA+ SS Y+VNNL+SPVLF EAL H+PE+AVV+EIAPHALLQA++KR
Sbjct: 714 STSIPEAQWQSSLARTSSAEYNVNNLVSPVLFQEALWHIPEHAVVLEIAPHALLQAVLKR 773
Query: 229 A-KPGAVSIGLTKRGAPDLPAHLLSGLGKLYNAGLQPRLNQLLPPVKFPVGRGTPMIQSL 287
K I L KR D L+ LGK++ G+ N L PPV+FP RGTP+I
Sbjct: 774 GVKSSCTIIPLMKRDHKDNLEFFLTNLGKVHLTGINVNPNALFPPVEFPAPRGTPLISPH 833
Query: 288 VEWDHSTEWS--VASFAGKGGSRSGECVIDVDLSKEE-DAYLSGHAIDGRILFPATGTEE 344
++WDHS W VA G S S V +D S E D YL H IDGR++FP TG
Sbjct: 834 IKWDHSQTWDVPVAEDFPNGSSSSSATVYSIDASPESPDHYLVDHCIDGRVIFPGTGYLC 893
Query: 345 AVEHFLQK-----IESIPRDDEFIALLHEIHNTNIAGHPYRGE-------------FELC 386
V L + +E P E ++ H I P G FE+
Sbjct: 894 LVWKTLARSLGLSLEETPVVFENVSF----HQATIL--PKTGTVALEVRLLEASHAFEVS 947
Query: 387 ESGSVAVSGRIRTPEDVSKEQLDLPEL-TPAISSEMLELSSADVYKDLRLRGYDYSGAFR 445
++G++ VSG++ ED + + D PE+ TP S+ + L+ +VYK+LRLRGYDY F+
Sbjct: 948 DTGNLIVSGKVYLWEDPNSKLFDHPEVPTPPESASVSRLTQGEVYKELRLRGYDYGPQFQ 1007
Query: 446 GVSQSDNKGFTGKLDWTGNWISYIDTMLQFSILGINTRELYLPTRMQRVCIDPAKHKALV 505
G+ ++ +G GKL W NW++++DTMLQ SILG + + L LPTR+ + IDPA H+ V
Sbjct: 1008 GICEATLEGEQGKLLWKDNWVTFMDTMLQVSILGSSQQSLQLPTRVTAIYIDPATHRQKV 1067
Query: 506 ETLSGDKKTVPVAMYR 521
L D + V R
Sbjct: 1068 YRLKEDTQVADVTTSR 1083
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 52/81 (64%)
Query: 51 IPDFNGEKRPVWYVFSGMGSQWAGMVKGLLHIPVFDQSIRKSAEALRGENFDLIPVITSE 110
+ + KRP+W++ SGMG+QW GM L+ + F +SI +S EA++ + ++ S
Sbjct: 482 VQQVSTNKRPLWFICSGMGTQWRGMGLSLMRLDSFRESILRSDEAVKPLGVKVSDLLLST 541
Query: 111 DADTFEHILNSFVSIAAVQVS 131
D TF+ I+++FVS+ A+Q++
Sbjct: 542 DERTFDDIVHAFVSLTAIQIA 562
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 327 SGHAIDGRILFPATGTEEAVEHFLQKIESIPRDDEFIALLHEIHNTNIAGHPYRGEFELC 386
+ HA +L + T EAV+ L++ +D F+++L++I T A P+RG L
Sbjct: 415 TAHAALPHLLHASGRTLEAVQDLLEQGRQHSQDLAFVSMLNDIAATPTAAMPFRGYTVL- 473
Query: 387 ESGSVAVSGRIRTPEDVSKEQ 407
V GR++ + VS +
Sbjct: 474 -----GVEGRVQEVQQVSTNK 489
>sp|P12276|FAS_CHICK Fatty acid synthase OS=Gallus gallus GN=FASN PE=1 SV=5
Length = 2512
Score = 280 bits (716), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 175/454 (38%), Positives = 254/454 (55%), Gaps = 38/454 (8%)
Query: 102 DLIPVI-TSEDADTFEHILNS---FVS------IAAVQVSENRHAFHSKYIAEAGPKLRS 151
+++P SED T L+S FV+ + A +V AFHS Y+A P L S
Sbjct: 636 NVVPACHNSEDTVTVSGPLDSVSEFVTKLKKDGVFAKEVRRAGVAFHSYYMASIAPALLS 695
Query: 152 SLDRIIPAPKPRSARWISSSIPEDHWGTPLAQQSSPAYHVNNLLSPVLFYEALQHVPENA 211
+L ++IP PKPRSARWIS+SIPE W + LA+ SS YHVNNL++PVLF+E L+H+PENA
Sbjct: 696 ALKKVIPHPKPRSARWISTSIPESQWQSDLARNSSAEYHVNNLVNPVLFHEGLKHIPENA 755
Query: 212 VVIEIAPHALLQAIIKRA-KPGAVSIGLTKRGAPDLPAHLLSGLGKLYNAGLQPRLNQLL 270
VV+EIAPHALLQAI++R KP + L K+ + L+ GK++ G+ N L
Sbjct: 756 VVVEIAPHALLQAILRRTLKPTCTILPLMKKDHKNNLEFFLTQTGKIHLTGINVLGNNLF 815
Query: 271 PPVKFPVGRGTPMIQSLVEWDHSTEWSV---ASFAGKGGSRSGECVIDVDLSKEE-DAYL 326
PPV++PV GTP+I ++WDHS +W V F + V ++D+S + D YL
Sbjct: 816 PPVEYPVPVGTPLISPYIKWDHSQDWDVPKAEDFPSGSKGSASASVYNIDVSPDSPDHYL 875
Query: 327 SGHAIDGRILFPATGTEEAVEHFLQKIESIPRDDEFIALLHE---IHNTNIAGHPYRG-- 381
GH IDGR+L+PATG L + S+ E A++ E IH I P +G
Sbjct: 876 VGHCIDGRVLYPATGYLVLAWRTLAR--SLGMVMEQTAVMFEEVTIHQATIL--PKKGST 931
Query: 382 -----------EFELCESGSVAVSGRIRTPEDVSKEQL--DLPEL-TPAISSEMLELSSA 427
FE+ +G++AVSG+I E+ + + L + + A + L
Sbjct: 932 QLEVRIMPASHSFEVSGNGNLAVSGKISLLENDALKNFHNQLADFQSQANVTAKSGLLME 991
Query: 428 DVYKDLRLRGYDYSGAFRGVSQSDNKGFTGKLDWTGNWISYIDTMLQFSILGINTRELYL 487
DVY++L LRGY+Y F+GV + +++G GK+ W GNW++++DT+L +L R L L
Sbjct: 992 DVYQELHLRGYNYGPTFQGVLECNSEGSAGKILWNGNWVTFLDTLLHLIVLAETGRSLRL 1051
Query: 488 PTRMQRVCIDPAKHKALVETLSGDKKTVPVAMYR 521
PTR++ V IDP H+ V + + V + R
Sbjct: 1052 PTRIRSVYIDPVLHQEQVYQYQDNVEAFDVVVDR 1085
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 55/95 (57%)
Query: 38 GSQWAGMVKGLLHIPDFNGEKRPVWYVFSGMGSQWAGMVKGLLHIPVFDQSIRKSAEALR 97
G G + I RP+WY+ SGMG+QW GM L+ + +F QSI +S EAL+
Sbjct: 468 GYTLVGTESDITEIQQVQASGRPLWYICSGMGTQWKGMGLSLMKLDLFRQSILRSDEALK 527
Query: 98 GENFDLIPVITSEDADTFEHILNSFVSIAAVQVSE 132
+ ++ + D +TF+ +++FV +AA+Q+++
Sbjct: 528 STGLKVSDLLLNADENTFDDTVHAFVGLAAIQIAQ 562
>sp|Q71SP7|FAS_BOVIN Fatty acid synthase OS=Bos taurus GN=FASN PE=2 SV=1
Length = 2513
Score = 277 bits (708), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 191/553 (34%), Positives = 280/553 (50%), Gaps = 59/553 (10%)
Query: 1 IALVDLLSSVGISPEGIVGHSDFNGEKRPVWYVFSGMGSQWAGMVKGLLHIPDFNGEKRP 60
IAL+DLL+S+G+ P+GI+GHS +G G G + +
Sbjct: 561 IALIDLLTSMGLQPDGIIGHS---------------LGEVACGYADGCISQEE------- 598
Query: 61 VWYVFSGMGSQWAGMVKGLLHIP---------VFDQSIRKSAEALRGENFDLIPVIT--S 109
+ + + W G +IP +++ ++ + + I +T
Sbjct: 599 -----AILSAYWRGQCIKEANIPPGAMAAVGLTWEECKQRCPPGIVPACHNCIDTVTISG 653
Query: 110 EDADTFEHILN-SFVSIAAVQVSENRHAFHSKYIAEAGPKLRSSLDRIIPAPKPRSARWI 168
A E + + A +V AFHS ++ P L L ++I P+PRS RW+
Sbjct: 654 PQASMLEFVQQLKQEGVFAKEVRTGGMAFHSYFMDAIAPMLLQQLKKVIREPQPRSPRWL 713
Query: 169 SSSIPEDHWGTPLAQQSSPAYHVNNLLSPVLFYEALQHVPENAVVIEIAPHALLQAIIKR 228
S+SIPE W LA+ S Y+VNNL+SPVLF EAL VPE+AVV+EIAPHALLQA++KR
Sbjct: 714 STSIPETQWQESLARTFSAEYNVNNLVSPVLFQEALWRVPEDAVVLEIAPHALLQAVLKR 773
Query: 229 A-KPGAVSIGLTKRGAPDLPAHLLSGLGKLYNAGLQPRLNQLLPPVKFPVGRGTPMIQSL 287
K I L K+ D LS +G+LY G+ N L PPV+FP RGTP+I
Sbjct: 774 GLKSSCTIIPLMKKDHRDNLEFFLSNVGQLYLTGIDVNPNGLFPPVEFPAPRGTPLISPH 833
Query: 288 VEWDHSTEWSVASFAG--KGGSRSGECVIDVDLSKEE-DAYLSGHAIDGRILFPATGTEE 344
++WDHS W V + G S S + +D++ E D YL H IDGRI+FP TG
Sbjct: 834 IKWDHSQTWDVPTAEDFPSGSSSSSATIYKIDINPESPDHYLVDHCIDGRIIFPGTGYLC 893
Query: 345 AVEHFL-----QKIESIPRDDEFIALLHEI--HNTNIAGHPYR-----GEFELCESGSVA 392
V L Q +E P E + L + T I R FE+ E+G++
Sbjct: 894 LVWKTLARALDQNMEHTPVVFEDVTLHQAVILPKTGIVLLKVRLLEASCTFEVSENGNLI 953
Query: 393 VSGRIRTPEDVSKEQLDL---PE-LTPAISSEMLELSSADVYKDLRLRGYDYSGAFRGVS 448
SG++ ED + + D P+ TP + + LS DVYK+L+L+G++Y F+G+
Sbjct: 954 ASGKVYQWEDPNPKLFDNRYGPDPATPVDPTTAIHLSRGDVYKELQLQGFNYGPYFQGIL 1013
Query: 449 QSDNKGFTGKLDWTGNWISYIDTMLQFSILGINTRELYLPTRMQRVCIDPAKHKALVETL 508
++ ++G TG+L W NW++++DTMLQ SIL + R L LPTR+ + I PA H+ + TL
Sbjct: 1014 EASSEGNTGQLLWKDNWVTFMDTMLQMSILAPSKRSLRLPTRITAIYIHPATHQQKLYTL 1073
Query: 509 SGDKKTVPVAMYR 521
+ V + R
Sbjct: 1074 QDKTQVADVVINR 1086
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 47/74 (63%)
Query: 58 KRPVWYVFSGMGSQWAGMVKGLLHIPVFDQSIRKSAEALRGENFDLIPVITSEDADTFEH 117
KRP+W++ SGMG+QW GM L+ + F SI +S EA++ + ++ S D F+
Sbjct: 489 KRPLWFICSGMGTQWRGMGLSLMRLSRFRDSILRSDEAVKPLGLQVSQLLLSTDEAIFDD 548
Query: 118 ILNSFVSIAAVQVS 131
++ SFVS+ A+Q++
Sbjct: 549 MVISFVSLTAIQIA 562
>sp|Q869W9|PKS16_DICDI Probable polyketide synthase 16 OS=Dictyostelium discoideum
GN=pks16 PE=2 SV=1
Length = 2603
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 75/192 (39%), Gaps = 41/192 (21%)
Query: 189 YHVNNLLSPVLFYEALQHV---------PENAVVIEIAPHALLQAIIKRAKPGAVSIGLT 239
Y +NL PV F +A+ ++ +NA+ +EI PH L I + KP +I T
Sbjct: 791 YIYDNLRMPVEFTKAISNIFNFIEENESYKNAIFLEIGPHPTLGFYIPKCKPSNSTI--T 848
Query: 240 KRGAPDLPAH--------LLSGLGKLYNAGLQPRL---NQLLPPVKFPVGRGTPMIQSLV 288
+ P H + LY G++ QLLP G +
Sbjct: 849 SKPIIVSPLHKKKEELTQFKLAISTLYCNGVEIDFASGQQLLPTSSSSGGGDISSFKEST 908
Query: 289 ------EWDHSTEW---SVASFAGKGGSRS--------GECVID--VDLSKEEDAYLSGH 329
+WD W + + +G S + G +++ +D++K YL GH
Sbjct: 909 NKLPRYQWDFEEYWDEPNQSKMVKRGPSNNLLGHDQFAGNTLMELFIDINKSAHQYLKGH 968
Query: 330 AIDGRILFPATG 341
I G+ LFP +G
Sbjct: 969 KIKGKYLFPGSG 980
>sp|Q869X2|PKS17_DICDI Probable polyketide synthase 17 OS=Dictyostelium discoideum
GN=pks17 PE=3 SV=1
Length = 2604
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 74/192 (38%), Gaps = 41/192 (21%)
Query: 189 YHVNNLLSPVLFYEALQHV---------PENAVVIEIAPHALLQAIIKRAKPGAVSIGLT 239
Y +NL PV F +A+ ++ +NA+ +EI PH L I + KP +I T
Sbjct: 791 YIYDNLRMPVEFTKAISNIFNFIEENESYKNAIFLEIGPHPTLGFYIPKCKPSNSTI--T 848
Query: 240 KRGAPDLPAH--------LLSGLGKLYNAGLQPRL---NQLLPPVKFPVGRGTPMIQSLV 288
+ P H + LY G++ QLLP G +
Sbjct: 849 SKPIIVSPLHKKKEELTQFKLAISTLYCNGVEIDFASGQQLLPTSSSSGGGDISSFKEST 908
Query: 289 ------EWDHSTEW---SVASFAGKGGSRS--------GECVID--VDLSKEEDAYLSGH 329
+WD W + + +G S + G +++ +D+ K YL GH
Sbjct: 909 NKLPRYQWDFEEYWDEPNQSKMVKRGPSNNLLGHDQFAGNTLMELFIDIDKSAHQYLKGH 968
Query: 330 AIDGRILFPATG 341
I G+ LFP +G
Sbjct: 969 KIKGKYLFPGSG 980
>sp|Q03133|ERYA3_SACER Erythronolide synthase, modules 5 and 6 OS=Saccharopolyspora
erythraea GN=eryA PE=1 SV=4
Length = 3172
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 61 VWYVFSGMGSQWAGMVKGLLHIPVFDQSI 89
V +VF G G+QW GM +GLL +PVF +SI
Sbjct: 2021 VVFVFPGQGAQWEGMARGLLSVPVFAESI 2049
Score = 39.3 bits (90), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 16/147 (10%)
Query: 135 HAFHSKYIAEAGPKLRSSLDRIIPAPKPRSARWISSSIPEDHWGTPLAQQSSPAYHVNNL 194
+A HS+++ E + + LD I R+A + S++ + + P Y +NL
Sbjct: 2212 YASHSRHVEEIRETILADLDGI---SARRAAIPLYSTLHGER------RDMGPRYWYDNL 2262
Query: 195 LSPVLFYEAL--QHVPENAVVIEIAPHALLQAIIKRAKPGAVSIGLTKRGAPDLPAHLLS 252
S V F EA+ Q +A +E++PH +L A ++ AV+IG R + HL++
Sbjct: 2263 RSQVRFDEAVSAQSPDGHATFVEMSPHPVLTAAVQEIAADAVAIGSLHRDTAE--EHLIA 2320
Query: 253 GLGKLYNAGLQPRLNQLL---PPVKFP 276
L + + G+ + PPV P
Sbjct: 2321 ELARAHVHGVAVDWRNVFPAAPPVALP 2347
Score = 36.6 bits (83), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 30 VWYVFSGMGSQWAGMVKGLLHIPDF 54
V +VF G G+QW GM +GLL +P F
Sbjct: 2021 VVFVFPGQGAQWEGMARGLLSVPVF 2045
>sp|Q03131|ERYA1_SACER Erythronolide synthase, modules 1 and 2 OS=Saccharopolyspora
erythraea GN=eryA PE=1 SV=1
Length = 3491
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
Query: 57 EKRPVWYVFSGMGSQWAGMVKGLLHI-PVFDQSIRKSAEALRGE-NFDLIPVITSEDA 112
++R V +VF G G QWAGM LL PVF ++R+ A+AL +F++IP + +E A
Sbjct: 1027 QQRAV-FVFPGQGWQWAGMAVDLLDTSPVFAAALRECADALEPHLDFEVIPFLRAEAA 1083
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 20/27 (74%)
Query: 63 YVFSGMGSQWAGMVKGLLHIPVFDQSI 89
+VF G G+QW GM + LL +PVF +SI
Sbjct: 2509 FVFPGQGAQWEGMARELLPVPVFAESI 2535
>sp|Q02251|MCAS_MYCBO Mycocerosic acid synthase OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=mas PE=1 SV=2
Length = 2111
Score = 41.6 bits (96), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 14/99 (14%)
Query: 44 MVKGLLHIPDFN---------GEKRPVWYVFSGMGSQWAGMVKGLLHI-PVFDQSIRKSA 93
+V+GL + D + G++ PVW VFSG GSQWA M LL PVF +I K
Sbjct: 508 LVEGLREVADGDALYDAAVGHGDRGPVW-VFSGQGSQWAAMGTQLLASEPVFAATIAKLE 566
Query: 94 EALRGEN-FDLIPVITSEDADTFEHILNSFVSIAAVQVS 131
+ E+ F + IT++ T I ++ AVQV+
Sbjct: 567 PVIAAESGFSVTEAITAQ--QTVTGIDKVQPAVFAVQVA 603
Score = 35.0 bits (79), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 22/35 (62%), Gaps = 5/35 (14%)
Query: 15 EGIVGHSDFNGEKRPVWYVFSGMGSQWAGMVKGLL 49
+ VGH G++ PVW VFSG GSQWA M LL
Sbjct: 523 DAAVGH----GDRGPVW-VFSGQGSQWAAMGTQLL 552
>sp|Q4WAZ9|NRP14_ASPFU Nonribosomal peptide synthetase 14 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=NRPS14 PE=2 SV=2
Length = 4007
Score = 38.9 bits (89), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 51 IPDFNGEKRP-VWYVFSGMGSQWAGMVKGLL-HIPVFDQSIRKSAEAL 96
+P+F+ +RP + VF+G G+QWAGM +GL+ +F Q I EA+
Sbjct: 561 VPEFDHVRRPKILGVFTGQGAQWAGMGQGLMAKSALFRQVIEVMEEAM 608
Score = 35.8 bits (81), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 5/48 (10%)
Query: 7 LSSVGISPEGIVGHS----DFNGEKRP-VWYVFSGMGSQWAGMVKGLL 49
L+ VG +P +G +F+ +RP + VF+G G+QWAGM +GL+
Sbjct: 544 LAKVGSNPGAEIGTRSSVPEFDHVRRPKILGVFTGQGAQWAGMGQGLM 591
>sp|Q07017|OL56_STRAT Oleandomycin polyketide synthase, modules 5 and 6 OS=Streptomyces
antibioticus GN=orfB PE=3 SV=1
Length = 3519
Score = 37.7 bits (86), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 57 EKRPVWYVFSGMGSQWAGMVKGLLH-IPVFDQSIRKSAEALRG-ENFDLIPVITSEDADT 114
E R V +VF G GSQW GM GLL PVF +++ + A L + L+ V+ DA
Sbjct: 565 EGRRVVFVFPGQGSQWVGMAAGLLDACPVFAEAVAECAAVLDPVTGWSLVEVLQGRDATV 624
Query: 115 FEHILNSFVSIAAVQVSENR 134
+ ++ AV VS R
Sbjct: 625 LGRVDVVQPALWAVMVSLAR 644
Score = 37.7 bits (86), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 57 EKRPVWYVFSGMGSQWAGMVKGLLH-IPVFDQSIRKSAEALRG-ENFDLIPVITSEDADT 114
E R V +VF G GSQW GM GLL PVF +++ + A L + L+ V+ DA
Sbjct: 2216 EGRRVVFVFPGQGSQWVGMAAGLLDACPVFAEAVAECAAVLDPVTGWSLVEVLQGRDATV 2275
Query: 115 FEHILNSFVSIAAVQVSENR 134
+ ++ AV VS R
Sbjct: 2276 LGRVDVVQPALWAVMVSLAR 2295
Score = 33.9 bits (76), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 16/24 (66%)
Query: 26 EKRPVWYVFSGMGSQWAGMVKGLL 49
E R V +VF G GSQW GM GLL
Sbjct: 565 EGRRVVFVFPGQGSQWVGMAAGLL 588
Score = 33.9 bits (76), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 16/24 (66%)
Query: 26 EKRPVWYVFSGMGSQWAGMVKGLL 49
E R V +VF G GSQW GM GLL
Sbjct: 2216 EGRRVVFVFPGQGSQWVGMAAGLL 2239
>sp|P22367|MSAS_PENPA 6-methylsalicylic acid synthase OS=Penicillium patulum PE=1 SV=1
Length = 1774
Score = 37.4 bits (85), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 59 RPVWYVFSGMGSQWAGMVKGLLHIPVFDQSIRKSAEALRGE 99
+ V +VFSG G+QW M K L+H PVF +I+ E ++ E
Sbjct: 564 KDVVWVFSGHGAQWPDMGKQLIHNPVFFAAIQPLDELIQAE 604
>sp|Q03132|ERYA2_SACER Erythronolide synthase, modules 3 and 4 OS=Saccharopolyspora
erythraea GN=eryA PE=1 SV=3
Length = 3567
Score = 36.2 bits (82), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 52 PDFNGEKRPVWYVFSGMGSQWAGMVKGLLHIP-VFDQSIRKSAEAL 96
P + ++PV VF G G+QW GM + LL VF +S+ + AEAL
Sbjct: 2005 PVTSAPRKPV-LVFPGQGAQWVGMARDLLESSEVFAESMSRCAEAL 2049
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 57 EKRPVWYVFSGMGSQWAGMVKGLL-HIPVFDQSIRKSAEAL 96
+ R V ++F G GSQWAGM LL PVF IR E++
Sbjct: 555 DGRNVVFLFPGQGSQWAGMGAELLSSSPVFAGKIRACDESM 595
>sp|Q559A9|PKS13_DICDI Probable polyketide synthase 13 OS=Dictyostelium discoideum
GN=pks13 PE=3 SV=1
Length = 2551
Score = 36.2 bits (82), Expect = 0.63, Method: Composition-based stats.
Identities = 48/202 (23%), Positives = 74/202 (36%), Gaps = 54/202 (26%)
Query: 188 AYHVNNLLSPVLFYEAL----QHVPENA-----VVIEIAPHALLQAIIKRAKPGAVSIGL 238
+Y NN++SPV F + + +H+ N V IE+APH LQ +K+ P +
Sbjct: 778 SYVFNNIVSPVKFSQTISNLYKHIESNQLGNDIVFIELAPHPTLQFYLKQMIPKPTN--- 834
Query: 239 TKRGAPDLPAHLLSGLGKLYN--AGLQPRLNQLLPPVKFPV------------GRGTPMI 284
+ + + S L K N +Q ++QL + V G I
Sbjct: 835 -DDNSIEFKVSVYSALNKKNNDIEEIQRTISQLYCDNGYNVNFKCQFQHDDTHGSINSNI 893
Query: 285 QSL-------VEWDHSTEW----SVASFAGKG--------------GSRSGECVIDVDLS 319
L +WD W S++ G S+S E ID+
Sbjct: 894 NQLSNISLPHYQWDDEKYWKEDPSISKLIVNGPQTDNLGYLNENSPNSKSYETFIDI--K 951
Query: 320 KEEDAYLSGHAIDGRILFPATG 341
+ YL GH + G+ FP G
Sbjct: 952 RPPFQYLKGHMVKGKYYFPGCG 973
>sp|Q9Y4G2|PKHM1_HUMAN Pleckstrin homology domain-containing family M member 1 OS=Homo
sapiens GN=PLEKHM1 PE=1 SV=3
Length = 1056
Score = 36.2 bits (82), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 12/83 (14%)
Query: 82 IPVFDQSIRKSAEALRGENFDLIPVITSEDADTFEHILNSFVS-IAAVQVSENRHAFHSK 140
IPV + + S +AL+ + L V+TSED D N+ S + AV + H H+K
Sbjct: 15 IPVIKKKLVGSVKALQKQYVSLDTVVTSEDGDA-----NTMCSALEAVFI----HGLHAK 65
Query: 141 YI-AEAGPKLRSSLDRIIPAPKP 162
+I AEAG K + S + P P+P
Sbjct: 66 HIRAEAGGKRKKSAHQ-KPLPQP 87
>sp|Q54ED7|PKS40_DICDI Probable polyketide synthase 40 OS=Dictyostelium discoideum
GN=pks40 PE=3 SV=1
Length = 2552
Score = 35.0 bits (79), Expect = 1.3, Method: Composition-based stats.
Identities = 51/193 (26%), Positives = 75/193 (38%), Gaps = 44/193 (22%)
Query: 189 YHVNNLLSPVLFYEAL----QHVPENAVV---------IEIAPHALLQAIIKRAKP---- 231
Y +N+++PV F + +H+ N V IEIAPH L +K+ P
Sbjct: 786 YVYDNIINPVRFTNTISNIYKHIELNYSVNNNSNEIIFIEIAPHPTLSFYLKQMVPEDKK 845
Query: 232 GAVSI--GLTKRGAPDL--PAHLLSGLGKL-YNA-GLQPRLNQLLPPVKFPVGRGTPMIQ 285
+VSI L+K+ + DL L+S L L YN G +L+ L P+ Q
Sbjct: 846 QSVSIFSPLSKKKSNDLFEIQKLISELYCLGYNGIGFNIQLSNLNENDNIQTSLSLPLYQ 905
Query: 286 SLVEWDHSTEWSVASFAGK-----------GGSRSGEC------VIDVDLSKEEDAYLSG 328
W+ W + S G S S +D+ K+ +L G
Sbjct: 906 ----WEEQEYWKLDSLYQHHLSNGPSINHLGISNSNHTPYIKSYQTHIDIQKKPFQWLKG 961
Query: 329 HAIDGRILFPATG 341
H I G+ FP G
Sbjct: 962 HQIKGKYYFPGCG 974
>sp|P25428|NGFV_MACLB Venom nerve growth factor OS=Macrovipera lebetina PE=1 SV=2
Length = 244
Score = 34.7 bits (78), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 14/68 (20%)
Query: 334 RILF-----PATGTEEAVEHFLQKIESIPRDDEFIALLHEIHNTNIAGHPYRGEFELCES 388
R+LF P + E++VE FL +S+ R+ H +HN RGEF +C+S
Sbjct: 91 RVLFSTQPPPLSRDEQSVE-FLDNADSLNRNIRAKRATHPVHN--------RGEFSVCDS 141
Query: 389 GSVAVSGR 396
SV V+ +
Sbjct: 142 VSVWVANK 149
>sp|Q558W4|PKS15_DICDI Probable polyketide synthase 15 OS=Dictyostelium discoideum GN=pks15
PE=3 SV=2
Length = 3174
Score = 34.7 bits (78), Expect = 2.0, Method: Composition-based stats.
Identities = 44/202 (21%), Positives = 73/202 (36%), Gaps = 55/202 (27%)
Query: 189 YHVNNLLSPVLFYEAL----QHVPENA-----VVIEIAPHALLQAIIKRAKP-------G 232
Y NN++ PV F + + +H+ N V IE+APH LQ +K+ P G
Sbjct: 885 YIYNNIVEPVKFSQTISNLYKHIEINKLGTDIVFIELAPHPTLQFYLKQMIPVSTNYFSG 944
Query: 233 AVSIGLTKRGAPDLPAHLLSGLGKLYNAGLQPRLNQLLPPVKFPVGRGTPMIQSLV---- 288
+SI + + + KLY + R N +F G +++
Sbjct: 945 KISIYSPLHKKKNDTMEIQKTIAKLY---CENRYNINFKS-QFDCGSINNHNHTVIPPLQ 1000
Query: 289 ----------EWDHSTEWS-------------------VASFAGKGGSRSGECVIDVDLS 319
+WD W ++++ +S + ID+
Sbjct: 1001 QPQPQPLPNYQWDDEKYWKEDLIQQKHRIEGPPIDILGLSNYDNSSNVKSYQTFIDI--K 1058
Query: 320 KEEDAYLSGHAIDGRILFPATG 341
KE YL GH ++G+ FP G
Sbjct: 1059 KEPFKYLKGHIVNGKYYFPGCG 1080
>sp|Q55E72|PKS1_DICDI Probable polyketide synthase 1 OS=Dictyostelium discoideum GN=stlA
PE=1 SV=1
Length = 3147
Score = 34.3 bits (77), Expect = 2.2, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 11/57 (19%)
Query: 188 AYHV-NNLLSPVLFYEALQ--------HVPENAVVI--EIAPHALLQAIIKRAKPGA 233
A H+ +N+ PVLF + ++ H P N VI EIAPH L ++IK++ P +
Sbjct: 831 AQHIYDNVREPVLFQKTIESITSYIKSHYPSNQKVIYVEIAPHPTLFSLIKKSIPSS 887
>sp|Q5PQS0|PKHM1_RAT Pleckstrin homology domain-containing family M member 1 OS=Rattus
norvegicus GN=Plekhm1 PE=1 SV=1
Length = 1059
Score = 34.3 bits (77), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 12/83 (14%)
Query: 82 IPVFDQSIRKSAEALRGENFDLIPVITSEDADTFEHILNSFVS-IAAVQVSENRHAFHSK 140
I V + + S +AL+ ++ L V+TSED D N+ S + AV + H H+K
Sbjct: 14 IQVIKKKLVGSVKALQKQHVSLDTVVTSEDGDA-----NTMCSALEAVFI----HGLHAK 64
Query: 141 YI-AEAGPKLRSSLDRIIPAPKP 162
YI AEAG K R P P+P
Sbjct: 65 YIRAEAGGK-RKKHTHQKPLPQP 86
>sp|O13878|UTP17_SCHPO U3 small nucleolar RNA-associated protein 17 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=utp17 PE=3 SV=3
Length = 806
Score = 33.9 bits (76), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 7/53 (13%)
Query: 103 LIPVITSEDADTFEHIL--NSFVSIAAVQVSENRH-----AFHSKYIAEAGPK 148
++ + TS D+D++ L NS V I AV ++E H +F SKY+ GPK
Sbjct: 312 ILSIATSHDSDSYALHLGDNSLVVIRAVDLAEQIHVSGINSFESKYLTSTGPK 364
>sp|Q7TXL9|PPSB_MYCBO Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I
PpsB OS=Mycobacterium bovis (strain ATCC BAA-935 /
AF2122/97) GN=ppsB PE=1 SV=1
Length = 1538
Score = 33.1 bits (74), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Query: 16 GIVGHSDFNGEKRP-VWYVFSGMGSQWAGMVKGLL 49
G+V H D G P +V+SG GSQWAGM + LL
Sbjct: 547 GVVSHQD--GSPGPGTVFVYSGRGSQWAGMGRQLL 579
>sp|O64894|ACOX2_CUCMA Acyl-coenzyme A oxidase, peroxisomal OS=Cucurbita maxima GN=Acx
PE=1 SV=1
Length = 690
Score = 33.1 bits (74), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 125 IAAVQVSENRHAFHSKYIAEAGPKLRSSLDRIIPAPKPRSARWISSSIPEDHWGTPLAQQ 184
+AA + + + F +A LR S++ + P P +ARW S+ DH P Q
Sbjct: 483 VAAYLLKQYQEKFQGGTLAVTWNYLRESMNTYLSQPNPVTARWESA----DHLRDPKFQL 538
Query: 185 SSPAYHVNNLLSPV 198
+ Y + LL V
Sbjct: 539 DAFQYRTSRLLQSV 552
>sp|Q10978|PPSB_MYCTU Phthiocerol synthesis polyketide synthase type I PpsB
OS=Mycobacterium tuberculosis GN=ppsB PE=3 SV=2
Length = 1538
Score = 33.1 bits (74), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Query: 16 GIVGHSDFNGEKRP-VWYVFSGMGSQWAGMVKGLL 49
G+V H D G P +V+SG GSQWAGM + LL
Sbjct: 547 GVVSHQD--GSPGPGTVFVYSGRGSQWAGMGRQLL 579
>sp|Q13423|NNTM_HUMAN NAD(P) transhydrogenase, mitochondrial OS=Homo sapiens GN=NNT PE=1
SV=3
Length = 1086
Score = 32.7 bits (73), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 196 SPVLF-YEALQHVPENAVVIEIAPHALLQAIIKRAKPGAVSI--GLTKRGAPDLPAHLLS 252
+PVLF E ++ + E +VV+++A A + KPG + I G+T G DLP+ + +
Sbjct: 325 APVLFNKEMIESMKEGSVVVDLAAEA--GGNFETTKPGELYIHKGITHIGYTDLPSRMAT 382
Query: 253 GLGKLYNAGLQPRLNQLLP 271
LY+ + L + P
Sbjct: 383 QASTLYSNNITKLLKAISP 401
>sp|Q8ZQQ2|SLRP_SALTY E3 ubiquitin-protein ligase SlrP OS=Salmonella typhimurium (strain
LT2 / SGSC1412 / ATCC 700720) GN=slrP PE=1 SV=1
Length = 765
Score = 32.3 bits (72), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 471 TMLQFSILGINTRELYLPTRMQRVCIDPAKHKALVETLSGDKKTV 515
T L+ ILG+ T Y+P ++ + +D + K+L E L G+ KT+
Sbjct: 181 TELRLKILGLTTIPAYIPEQITTLILDNNELKSLPENLQGNIKTL 225
>sp|D0ZRB2|SLRP_SALT1 E3 ubiquitin-protein ligase SlrP OS=Salmonella typhimurium (strain
14028s / SGSC 2262) GN=slrP PE=3 SV=1
Length = 765
Score = 32.3 bits (72), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 471 TMLQFSILGINTRELYLPTRMQRVCIDPAKHKALVETLSGDKKTV 515
T L+ ILG+ T Y+P ++ + +D + K+L E L G+ KT+
Sbjct: 181 TELRLKILGLTTIPAYIPEQITTLILDNNELKSLPENLQGNIKTL 225
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 209,703,132
Number of Sequences: 539616
Number of extensions: 9648361
Number of successful extensions: 22959
Number of sequences better than 100.0: 36
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 22853
Number of HSP's gapped (non-prelim): 115
length of query: 521
length of database: 191,569,459
effective HSP length: 122
effective length of query: 399
effective length of database: 125,736,307
effective search space: 50168786493
effective search space used: 50168786493
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)