BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9441
(418 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P12785|FAS_RAT Fatty acid synthase OS=Rattus norvegicus GN=Fasn PE=1 SV=3
Length = 2505
Score = 311 bits (798), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 183/418 (43%), Positives = 242/418 (57%), Gaps = 15/418 (3%)
Query: 9 KAFDVAGHAFHSKYIAEAGPKLRSSLDRIIPAPKPRSARWISSSIPEDHWGTPLAQQSSP 68
K G AFHS ++ P L +L ++I P+PRSARW+S+SIPE W + LA+ SS
Sbjct: 673 KEVRTGGLAFHSYFMEGIAPTLLQALKKVIREPRPRSARWLSTSIPEAQWQSSLARTSSA 732
Query: 69 AYHVNNLLSPVLFYEALQHVPENAVVIEIAPHALLQAIIKRA-KPGAVSIGLTKRGAPDL 127
Y+VNNL+SPVLF EAL HVPE+AVV+EIAPHALLQA++KR KP I L KR D
Sbjct: 733 EYNVNNLVSPVLFQEALWHVPEHAVVLEIAPHALLQAVLKRGVKPSCTIIPLMKRDHKDN 792
Query: 128 PAHLLSGLGKLYNAGLQPRLNQLLPPVKFPVGRGTPMIQSLVEWDHSTEWS--VASFAGK 185
L+ LGK++ G+ N L PPV+FPV RGTP+I ++WDHS W VA
Sbjct: 793 LEFFLTNLGKVHLTGIDINPNALFPPVEFPVPRGTPLISPHIKWDHSQTWDIPVAEDFPN 852
Query: 186 GGSRSGECVIDVDLSKE-EDAYLSGHAIDGRILFPATGTEEAVEHFLQKIESIPRDDEFI 244
G S S V ++D S E D YL H IDGR+LFP TG V L + S+ ++ +
Sbjct: 853 GSSSSSATVYNIDASSESSDHYLVDHCIDGRVLFPGTGYLYLVWKTLARSLSLSLEETPV 912
Query: 245 ALLH-EIHNTNIAGHPYRGYTVLSDN--SATHELAVSEFELCESGSVAVSGRIRTPEDVS 301
+ H I P G L A+H FE+ +SG++ VSG++ ED
Sbjct: 913 VFENVTFHQATIL--PRTGTVPLEVRLLEASH-----AFEVSDSGNLIVSGKVYQWEDPD 965
Query: 302 KEQLDLPEL-TPAISSEMLELSSADVYKDLRLRGYDYSGAFRGVSQSDNKGFTGKLDWTG 360
+ D PE+ PA S + L+ +VYK+LRLRGYDY F+GV ++ +G GKL W
Sbjct: 966 SKLFDHPEVPIPAESESVSRLTQGEVYKELRLRGYDYGPHFQGVYEATLEGEQGKLLWKD 1025
Query: 361 NWISYIDTMLQFSILGINTRELYLPTRMQRVCIDPAKHKALVETLSGDKKTVPVAMYR 418
NW++++DTMLQ SILG + + L LPTR+ + IDPA H V L GD + V R
Sbjct: 1026 NWVTFMDTMLQISILGFSKQSLQLPTRVTAIYIDPATHLQKVYMLEGDTQVADVTTSR 1083
Score = 38.1 bits (87), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 223 TEEAVEHFLQKIESIPRDDEFIALLHEIHNTNIAGHPYRGYTVLSDNSATHEL 275
T EAV+ L++ +D F+++L++I T A P+RGYTVL E+
Sbjct: 430 TMEAVQGLLEQGRQHSQDLAFVSMLNDIAATPTAAMPFRGYTVLGVEGHVQEV 482
>sp|P49327|FAS_HUMAN Fatty acid synthase OS=Homo sapiens GN=FASN PE=1 SV=3
Length = 2511
Score = 308 bits (789), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 181/420 (43%), Positives = 243/420 (57%), Gaps = 20/420 (4%)
Query: 9 KAFDVAGHAFHSKYIAEAGPKLRSSLDRIIPAPKPRSARWISSSIPEDHWGTPLAQQSSP 68
K G AFHS ++ P L L ++I PKPRSARW+S+SIPE W + LA+ SS
Sbjct: 673 KEVRTGGMAFHSYFMEAIAPPLLQELKKVIREPKPRSARWLSTSIPEAQWHSSLARTSSA 732
Query: 69 AYHVNNLLSPVLFYEALQHVPENAVVIEIAPHALLQAIIKRA-KPGAVSIGLTKRGAPDL 127
Y+VNNL+SPVLF EAL HVPE+AVV+EIAPHALLQA++KR KP I L K+ D
Sbjct: 733 EYNVNNLVSPVLFQEALWHVPEHAVVLEIAPHALLQAVLKRGLKPSCTIIPLMKKDHRDN 792
Query: 128 PAHLLSGLGKLYNAGLQPRLNQLLPPVKFPVGRGTPMIQSLVEWDHSTEWSVAS---FAG 184
L+G+G+L+ +G+ N L PPV+FP RGTP+I L++WDHS W V + F
Sbjct: 793 LEFFLAGIGRLHLSGIDANPNALFPPVEFPAPRGTPLISPLIKWDHSLAWDVPAAEDFPN 852
Query: 185 KGGSRSGECVIDVDLSKEE-DAYLSGHAIDGRILFPATGTEEAVEHFLQK-----IESIP 238
GS S + ++D S E D YL H +DGR+LFPATG V L + +E +P
Sbjct: 853 GSGSPSA-AIYNIDTSSESPDHYLVDHTLDGRVLFPATGYLSIVWKTLARALGLGVEQLP 911
Query: 239 RDDEFIALLHEIHNTNIAGHPYRGYTVLSDNSATHELAVSEFELCESGSVAVSGRIRTPE 298
E + L H I P G L A FE+ E+G++ VSG++ +
Sbjct: 912 VVFEDVVL----HQATIL--PKTGTVSLEVRLLE---ASRAFEVSENGNLVVSGKVYQWD 962
Query: 299 DVSKEQLDLPELTPAISSEMLELSSADVYKDLRLRGYDYSGAFRGVSQSDNKGFTGKLDW 358
D D PE +E L L+ A+VYK+LRLRGYDY F+G+ ++ +G +G+L W
Sbjct: 963 DPDPRLFDHPESPTPNPTEPLFLAQAEVYKELRLRGYDYGPHFQGILEASLEGDSGRLLW 1022
Query: 359 TGNWISYIDTMLQFSILGINTRELYLPTRMQRVCIDPAKHKALVETLSGDKKTVPVAMYR 418
NW+S++DTMLQ SILG LYLPTR+ + IDPA H+ + TL + V + R
Sbjct: 1023 KDNWVSFMDTMLQMSILGSAKHGLYLPTRVTAIHIDPATHRQKLYTLQDKAQVADVVVSR 1082
Score = 38.9 bits (89), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 115/287 (40%), Gaps = 39/287 (13%)
Query: 1 MLSPQGMCKAFDVAGHAFHSKYIAEAGPKLRSSLDRIIPAPKPRSARWISSSIPEDHWGT 60
MLSP+G CKAFD AG+ + RS + K AR + ++I T
Sbjct: 205 MLSPEGTCKAFDTAGNGY-----------CRSEGVVAVLLTKKSLARRVYATILNAGTNT 253
Query: 61 PLAQQSSPAYHVNNLLSPVL--FYEALQHVPENAVVIE-------IAPHALLQAIIK--- 108
++ + ++ ++ Y++ PE+ IE + L I +
Sbjct: 254 DGFKEQGVTFPSGDIQEQLIRSLYQSAGVAPESFEYIEAHGTGTKVGDPQELNGITRALC 313
Query: 109 --RAKPGAVSIGLTKRGAPDLPAHLLSGLGK----LYNAGLQPRLNQLLPPVKFPV---G 159
R +P + + G P+ PA L+ L K L + P L+ P + P G
Sbjct: 314 ATRQEPLLIGSTKSNMGHPE-PASGLAALAKVLLSLEHGLWAPNLHFHSPNPEIPALLDG 372
Query: 160 RGTPMIQSLVEWDHSTEWSVASFAGKGGSRSGECVIDVDLSKEEDAYLSGHAIDGRILFP 219
R + Q L + SF G GGS I + + + + HA R+L
Sbjct: 373 RLQVVDQPLPV--RGGNVGINSF-GFGGS---NVHIILRPNTQPPPAPAPHATLPRLLRA 426
Query: 220 ATGTEEAVEHFLQKIESIPRDDEFIALLHEIHNTNIAGHPYRGYTVL 266
+ T EAV+ L++ +D F+++L++I P+RGY VL
Sbjct: 427 SGRTPEAVQKLLEQGLRHSQDLAFLSMLNDIAAVPATAMPFRGYAVL 473
>sp|P19096|FAS_MOUSE Fatty acid synthase OS=Mus musculus GN=Fasn PE=1 SV=2
Length = 2504
Score = 297 bits (761), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 178/422 (42%), Positives = 241/422 (57%), Gaps = 23/422 (5%)
Query: 9 KAFDVAGHAFHSKYIAEAGPKLRSSLDRIIPAPKPRSARWISSSIPEDHWGTPLAQQSSP 68
K G AFHS ++ P L +L ++I P+PRSARW+S+SIPE W + LA+ SS
Sbjct: 673 KEVRTGGLAFHSYFMEGIAPTLLQALKKVIREPRPRSARWLSTSIPEAQWQSSLARTSSA 732
Query: 69 AYHVNNLLSPVLFYEALQHVPENAVVIEIAPHALLQAIIKRA-KPGAVSIGLTKRGAPDL 127
Y+VNNL+SPVLF EAL H+PE+AVV+EIAPHALLQA++KR K I L KR D
Sbjct: 733 EYNVNNLVSPVLFQEALWHIPEHAVVLEIAPHALLQAVLKRGVKSSCTIIPLMKRDHKDN 792
Query: 128 PAHLLSGLGKLYNAGLQPRLNQLLPPVKFPVGRGTPMIQSLVEWDHSTEWS--VASFAGK 185
L+ LGK++ G+ N L PPV+FP RGTP+I ++WDHS W VA
Sbjct: 793 LEFFLTNLGKVHLTGINVNPNALFPPVEFPAPRGTPLISPHIKWDHSQTWDVPVAEDFPN 852
Query: 186 GGSRSGECVIDVDLSKEE-DAYLSGHAIDGRILFPATGTEEAVEHFLQK-----IESIPR 239
G S S V +D S E D YL H IDGR++FP TG V L + +E P
Sbjct: 853 GSSSSSATVYSIDASPESPDHYLVDHCIDGRVIFPGTGYLCLVWKTLARSLGLSLEETPV 912
Query: 240 DDEFIALLHEIHNTNIAGHPYRGYTVLSDN--SATHELAVSEFELCESGSVAVSGRIRTP 297
E ++ H I P G L A+H FE+ ++G++ VSG++
Sbjct: 913 VFENVSF----HQATIL--PKTGTVALEVRLLEASH-----AFEVSDTGNLIVSGKVYLW 961
Query: 298 EDVSKEQLDLPEL-TPAISSEMLELSSADVYKDLRLRGYDYSGAFRGVSQSDNKGFTGKL 356
ED + + D PE+ TP S+ + L+ +VYK+LRLRGYDY F+G+ ++ +G GKL
Sbjct: 962 EDPNSKLFDHPEVPTPPESASVSRLTQGEVYKELRLRGYDYGPQFQGICEATLEGEQGKL 1021
Query: 357 DWTGNWISYIDTMLQFSILGINTRELYLPTRMQRVCIDPAKHKALVETLSGDKKTVPVAM 416
W NW++++DTMLQ SILG + + L LPTR+ + IDPA H+ V L D + V
Sbjct: 1022 LWKDNWVTFMDTMLQVSILGSSQQSLQLPTRVTAIYIDPATHRQKVYRLKEDTQVADVTT 1081
Query: 417 YR 418
R
Sbjct: 1082 SR 1083
Score = 40.0 bits (92), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 208 SGHAIDGRILFPATGTEEAVEHFLQKIESIPRDDEFIALLHEIHNTNIAGHPYRGYTVLS 267
+ HA +L + T EAV+ L++ +D F+++L++I T A P+RGYTVL
Sbjct: 415 TAHAALPHLLHASGRTLEAVQDLLEQGRQHSQDLAFVSMLNDIAATPTAAMPFRGYTVLG 474
Query: 268 DNSATHEL 275
E+
Sbjct: 475 VEGRVQEV 482
>sp|P12276|FAS_CHICK Fatty acid synthase OS=Gallus gallus GN=FASN PE=1 SV=5
Length = 2512
Score = 286 bits (733), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 170/418 (40%), Positives = 243/418 (58%), Gaps = 22/418 (5%)
Query: 14 AGHAFHSKYIAEAGPKLRSSLDRIIPAPKPRSARWISSSIPEDHWGTPLAQQSSPAYHVN 73
AG AFHS Y+A P L S+L ++IP PKPRSARWIS+SIPE W + LA+ SS YHVN
Sbjct: 677 AGVAFHSYYMASIAPALLSALKKVIPHPKPRSARWISTSIPESQWQSDLARNSSAEYHVN 736
Query: 74 NLLSPVLFYEALQHVPENAVVIEIAPHALLQAIIKRA-KPGAVSIGLTKRGAPDLPAHLL 132
NL++PVLF+E L+H+PENAVV+EIAPHALLQAI++R KP + L K+ + L
Sbjct: 737 NLVNPVLFHEGLKHIPENAVVVEIAPHALLQAILRRTLKPTCTILPLMKKDHKNNLEFFL 796
Query: 133 SGLGKLYNAGLQPRLNQLLPPVKFPVGRGTPMIQSLVEWDHSTEWSV---ASFAGKGGSR 189
+ GK++ G+ N L PPV++PV GTP+I ++WDHS +W V F
Sbjct: 797 TQTGKIHLTGINVLGNNLFPPVEYPVPVGTPLISPYIKWDHSQDWDVPKAEDFPSGSKGS 856
Query: 190 SGECVIDVDLSKEE-DAYLSGHAIDGRILFPATGTEEAVEHFLQKIESIPRDDEFIALLH 248
+ V ++D+S + D YL GH IDGR+L+PATG L + S+ E A++
Sbjct: 857 ASASVYNIDVSPDSPDHYLVGHCIDGRVLYPATGYLVLAWRTLAR--SLGMVMEQTAVMF 914
Query: 249 E---IHNTNIAGHPYRGYTVLSDN--SATHELAVSEFELCESGSVAVSGRIRTPEDVSKE 303
E IH I P +G T L A+H FE+ +G++AVSG+I E+ + +
Sbjct: 915 EEVTIHQATIL--PKKGSTQLEVRIMPASH-----SFEVSGNGNLAVSGKISLLENDALK 967
Query: 304 QL--DLPEL-TPAISSEMLELSSADVYKDLRLRGYDYSGAFRGVSQSDNKGFTGKLDWTG 360
L + + A + L DVY++L LRGY+Y F+GV + +++G GK+ W G
Sbjct: 968 NFHNQLADFQSQANVTAKSGLLMEDVYQELHLRGYNYGPTFQGVLECNSEGSAGKILWNG 1027
Query: 361 NWISYIDTMLQFSILGINTRELYLPTRMQRVCIDPAKHKALVETLSGDKKTVPVAMYR 418
NW++++DT+L +L R L LPTR++ V IDP H+ V + + V + R
Sbjct: 1028 NWVTFLDTLLHLIVLAETGRSLRLPTRIRSVYIDPVLHQEQVYQYQDNVEAFDVVVDR 1085
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 120/303 (39%), Gaps = 54/303 (17%)
Query: 1 MLSPQGMCKAFDVAGHAFHSKYIAEAGPKLRSSLDRIIPAPKPRSARWISSSIPEDHWGT 60
MLSP G CKAFDV+G+ + RS ++ K A+ + ++I T
Sbjct: 205 MLSPDGACKAFDVSGNGY-----------CRSEAVVVVLLTKKSMAKRVYATIVNAGSNT 253
Query: 61 PLAQQSS---PAYHVNNLLSPVLFYEA------LQHVPENAVVIEIAPHALLQAIIK--- 108
++ P+ + L L+ E +++V + ++ + I+
Sbjct: 254 DGFKEQGVTFPSGEMQQQLVGSLYRECGIKPGDVEYVEAHGTGTKVGDPQEVNGIVNVFC 313
Query: 109 RAKPGAVSIGLTKR--GAPDLPAHLLSGLGK----LYNAGLQPRLNQLLPPVKFP----- 157
+ + + IG TK G P+ PA L+ L K L + P L+ P P
Sbjct: 314 QCEREPLLIGSTKSNMGHPE-PASGLAALAKVILSLEHGLWAPNLHFNDPNPDIPALHDG 372
Query: 158 ----VGRGTPMIQSLVEWDHSTEWSVASFAGKGGSRSGECVIDVDLSKEEDAYLSGHAID 213
V + TP+ LV S+ SF G GGS + V L E +
Sbjct: 373 SLKVVCKPTPVKGGLV--------SINSF-GFGGSNA-----HVILRPNEKKCQPQETCN 418
Query: 214 GRILFPATG-TEEAVEHFLQKIESIPRDDEFIALLHEIHNTNIAGHPYRGYTVLSDNSAT 272
L G T+EAVE +++ F++LL +I ++ PYRGYT++ S
Sbjct: 419 LPRLVQVCGRTQEAVEILIEESRKHGGCSPFLSLLSDISAVPVSSMPYRGYTLVGTESDI 478
Query: 273 HEL 275
E+
Sbjct: 479 TEI 481
>sp|Q71SP7|FAS_BOVIN Fatty acid synthase OS=Bos taurus GN=FASN PE=2 SV=1
Length = 2513
Score = 271 bits (693), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 234/423 (55%), Gaps = 22/423 (5%)
Query: 9 KAFDVAGHAFHSKYIAEAGPKLRSSLDRIIPAPKPRSARWISSSIPEDHWGTPLAQQSSP 68
K G AFHS ++ P L L ++I P+PRS RW+S+SIPE W LA+ S
Sbjct: 673 KEVRTGGMAFHSYFMDAIAPMLLQQLKKVIREPQPRSPRWLSTSIPETQWQESLARTFSA 732
Query: 69 AYHVNNLLSPVLFYEALQHVPENAVVIEIAPHALLQAIIKRA-KPGAVSIGLTKRGAPDL 127
Y+VNNL+SPVLF EAL VPE+AVV+EIAPHALLQA++KR K I L K+ D
Sbjct: 733 EYNVNNLVSPVLFQEALWRVPEDAVVLEIAPHALLQAVLKRGLKSSCTIIPLMKKDHRDN 792
Query: 128 PAHLLSGLGKLYNAGLQPRLNQLLPPVKFPVGRGTPMIQSLVEWDHSTEWSV--ASFAGK 185
LS +G+LY G+ N L PPV+FP RGTP+I ++WDHS W V A
Sbjct: 793 LEFFLSNVGQLYLTGIDVNPNGLFPPVEFPAPRGTPLISPHIKWDHSQTWDVPTAEDFPS 852
Query: 186 GGSRSGECVIDVDLSKEE-DAYLSGHAIDGRILFPATGTEEAVEHFL-----QKIESIPR 239
G S S + +D++ E D YL H IDGRI+FP TG V L Q +E P
Sbjct: 853 GSSSSSATIYKIDINPESPDHYLVDHCIDGRIIFPGTGYLCLVWKTLARALDQNMEHTPV 912
Query: 240 DDEFIALLHEIHNTNIAGHPYRGYTVLSDNSATHELAVSEFELCESGSVAVSGRIRTPED 299
E + L H I P G +L A FE+ E+G++ SG++ ED
Sbjct: 913 VFEDVTL----HQAVIL--PKTGIVLLKVRLLE---ASCTFEVSENGNLIASGKVYQWED 963
Query: 300 VSKEQLDL---PE-LTPAISSEMLELSSADVYKDLRLRGYDYSGAFRGVSQSDNKGFTGK 355
+ + D P+ TP + + LS DVYK+L+L+G++Y F+G+ ++ ++G TG+
Sbjct: 964 PNPKLFDNRYGPDPATPVDPTTAIHLSRGDVYKELQLQGFNYGPYFQGILEASSEGNTGQ 1023
Query: 356 LDWTGNWISYIDTMLQFSILGINTRELYLPTRMQRVCIDPAKHKALVETLSGDKKTVPVA 415
L W NW++++DTMLQ SIL + R L LPTR+ + I PA H+ + TL + V
Sbjct: 1024 LLWKDNWVTFMDTMLQMSILAPSKRSLRLPTRITAIYIHPATHQQKLYTLQDKTQVADVV 1083
Query: 416 MYR 418
+ R
Sbjct: 1084 INR 1086
>sp|Q869W9|PKS16_DICDI Probable polyketide synthase 16 OS=Dictyostelium discoideum
GN=pks16 PE=2 SV=1
Length = 2603
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 75/192 (39%), Gaps = 41/192 (21%)
Query: 70 YHVNNLLSPVLFYEALQHV---------PENAVVIEIAPHALLQAIIKRAKPGAVSIGLT 120
Y +NL PV F +A+ ++ +NA+ +EI PH L I + KP +I T
Sbjct: 791 YIYDNLRMPVEFTKAISNIFNFIEENESYKNAIFLEIGPHPTLGFYIPKCKPSNSTI--T 848
Query: 121 KRGAPDLPAH--------LLSGLGKLYNAGLQPRL---NQLLPPVKFPVGRGTPMIQSLV 169
+ P H + LY G++ QLLP G +
Sbjct: 849 SKPIIVSPLHKKKEELTQFKLAISTLYCNGVEIDFASGQQLLPTSSSSGGGDISSFKEST 908
Query: 170 ------EWDHSTEW---SVASFAGKGGSRS--------GECVID--VDLSKEEDAYLSGH 210
+WD W + + +G S + G +++ +D++K YL GH
Sbjct: 909 NKLPRYQWDFEEYWDEPNQSKMVKRGPSNNLLGHDQFAGNTLMELFIDINKSAHQYLKGH 968
Query: 211 AIDGRILFPATG 222
I G+ LFP +G
Sbjct: 969 KIKGKYLFPGSG 980
>sp|Q869X2|PKS17_DICDI Probable polyketide synthase 17 OS=Dictyostelium discoideum
GN=pks17 PE=3 SV=1
Length = 2604
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 74/192 (38%), Gaps = 41/192 (21%)
Query: 70 YHVNNLLSPVLFYEALQHV---------PENAVVIEIAPHALLQAIIKRAKPGAVSIGLT 120
Y +NL PV F +A+ ++ +NA+ +EI PH L I + KP +I T
Sbjct: 791 YIYDNLRMPVEFTKAISNIFNFIEENESYKNAIFLEIGPHPTLGFYIPKCKPSNSTI--T 848
Query: 121 KRGAPDLPAH--------LLSGLGKLYNAGLQPRL---NQLLPPVKFPVGRGTPMIQSLV 169
+ P H + LY G++ QLLP G +
Sbjct: 849 SKPIIVSPLHKKKEELTQFKLAISTLYCNGVEIDFASGQQLLPTSSSSGGGDISSFKEST 908
Query: 170 ------EWDHSTEW---SVASFAGKGGSRS--------GECVID--VDLSKEEDAYLSGH 210
+WD W + + +G S + G +++ +D+ K YL GH
Sbjct: 909 NKLPRYQWDFEEYWDEPNQSKMVKRGPSNNLLGHDQFAGNTLMELFIDIDKSAHQYLKGH 968
Query: 211 AIDGRILFPATG 222
I G+ LFP +G
Sbjct: 969 KIKGKYLFPGSG 980
>sp|Q03133|ERYA3_SACER Erythronolide synthase, modules 5 and 6 OS=Saccharopolyspora
erythraea GN=eryA PE=1 SV=4
Length = 3172
Score = 39.3 bits (90), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 16/147 (10%)
Query: 16 HAFHSKYIAEAGPKLRSSLDRIIPAPKPRSARWISSSIPEDHWGTPLAQQSSPAYHVNNL 75
+A HS+++ E + + LD I R+A + S++ + + P Y +NL
Sbjct: 2212 YASHSRHVEEIRETILADLDGI---SARRAAIPLYSTLHGER------RDMGPRYWYDNL 2262
Query: 76 LSPVLFYEAL--QHVPENAVVIEIAPHALLQAIIKRAKPGAVSIGLTKRGAPDLPAHLLS 133
S V F EA+ Q +A +E++PH +L A ++ AV+IG R + HL++
Sbjct: 2263 RSQVRFDEAVSAQSPDGHATFVEMSPHPVLTAAVQEIAADAVAIGSLHRDTAE--EHLIA 2320
Query: 134 GLGKLYNAGLQPRLNQLL---PPVKFP 157
L + + G+ + PPV P
Sbjct: 2321 ELARAHVHGVAVDWRNVFPAAPPVALP 2347
>sp|Q54T36|PKS19_DICDI Probable polyketide synthase 19 OS=Dictyostelium discoideum GN=pks19
PE=3 SV=1
Length = 2778
Score = 38.1 bits (87), Expect = 0.13, Method: Composition-based stats.
Identities = 79/377 (20%), Positives = 142/377 (37%), Gaps = 81/377 (21%)
Query: 32 SSLDRIIPAPKPRSARWISSSIPE---------DHWGTPLAQQSSPAYHVNNLLSPVLFY 82
S+ + I+P P S+IP +H TP + +Y N++ PV F
Sbjct: 748 STKNEILPLEIPSR----QSTIPTFSTVTTNLFNHETTPF----NSSYVYENIIQPVRFS 799
Query: 83 EAL----QHVPENA-----VVIEIAPHALLQAIIKRAKPGAVS--------IGLTKRGAP 125
+ + QH+ N + IE++PH L +K+ P + S K+ +
Sbjct: 800 QTISNLYQHIENNKLGNELIFIEVSPHPSLSFYLKQMIPKSSSYFNSVSVLTSTNKKNSN 859
Query: 126 DLPAHLLSGLGKLYNAG----LQPRLNQLLPPVKFPVGRGTPMIQSLVEWDHSTEWSV-- 179
DL + S + ++Y G + + N V + + +I ++D W V
Sbjct: 860 DLD-EIHSTISQIYCLGYDINFKCQFNHNDDDVN-SIRNNSTIILPNYQFDEQYYWKVDI 917
Query: 180 ----------ASFAGKGGS--------RSGECVIDVDLSKEEDAYLSGHAIDGRILFPAT 221
F G S +S E +ID++ + YL H + G+ FP
Sbjct: 918 NFEQYRLNGPNVFNNLGKSMINYSSNNKSYESIIDIN--RNPFKYLKDHIVKGKYYFPGI 975
Query: 222 GTEEAVEHFLQKIESIPRDDEFIA--LLHE----IHNTNI---AGHPYRGYTVLSDNSAT 272
G + + + + + EF+A +L E I TN+ YR + DN A
Sbjct: 976 GYADNIMKLYPNKDIVINNLEFLAPFVLKENVKHILQTNVYQLGNTDYRVTFNIKDNKAN 1035
Query: 273 H--ELAVSEFELCESGSVAVSGRIRTPEDVSKEQLDLPELTPAISSEMLELSSADVYKDL 330
+ F+L +++ + + ++ +L LS +VYK
Sbjct: 1036 QWVQTCTGNFQL-----ISLKDNNNNNNNNHSSKYNINQLLS--ECNFTTLSKQEVYKYS 1088
Query: 331 RLR-GYDYSGAFRGVSQ 346
+LR G + G F+G+ +
Sbjct: 1089 KLRSGITHLGTFQGIEE 1105
>sp|B0G100|PKS7_DICDI Probable polyketide synthase 7 OS=Dictyostelium discoideum GN=pks7
PE=3 SV=1
Length = 2513
Score = 37.0 bits (84), Expect = 0.27, Method: Composition-based stats.
Identities = 69/320 (21%), Positives = 127/320 (39%), Gaps = 60/320 (18%)
Query: 70 YHVNNLLSPVLFYEAL----QHVPENA-----VVIEIAPHALLQAIIKRAKPGAVSIGLT 120
Y +N+++PV F + + +H+ N V IEIAPH L IK+ P +++ ++
Sbjct: 789 YVYDNIINPVRFTQTISNIYKHIESNQLNNDIVFIEIAPHPTLSFYIKQMVPSSLNESVS 848
Query: 121 -------KRGAPDLPAHLLSGL--GKLYNAGLQPRLNQL-------LPPVKFPVGRGTPM 164
K+ + +S L YN + + N LP ++
Sbjct: 849 VYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNKKIDLPLYQWSDETYFAQ 908
Query: 165 IQSLVEWDHSTEWSVASFAGKGGS------RSGECVIDVDLSKEEDAYLSGHAIDGRILF 218
Q+L + H E G S S + +ID++ + YL GH + G+ F
Sbjct: 909 TQTLEQ--HREEGPPIDHLGISNSFISPFNNSYKTLIDIN--NKPFQYLKGHMVKGKYYF 964
Query: 219 PATGTEEAVEHFLQKIESIPRDDEF------IALLHEIHNTNI---AGHPYRGYTVLSDN 269
P G + + + + EF I +++ TNI YR D
Sbjct: 965 PGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQCLQTNIQQTGKSEYRAQFHFKDQ 1024
Query: 270 SATH--ELAVSEFELCESGSVAVSGRIRTPEDVSKEQLDLPELTPAISSEMLELSSADVY 327
+ + + S F+L + G+ S E++ K + +L +LT ++Y
Sbjct: 1025 KSNQWTQSSNSNFQLLDHGNDIPSN--YNIEEIIKNKCNLSKLT-----------KNELY 1071
Query: 328 KDLRLR-GYDYSGAFRGVSQ 346
++ + G +Y+G F+GV++
Sbjct: 1072 THIKSKTGLNYTGVFKGVTE 1091
>sp|Q559A9|PKS13_DICDI Probable polyketide synthase 13 OS=Dictyostelium discoideum
GN=pks13 PE=3 SV=1
Length = 2551
Score = 36.2 bits (82), Expect = 0.48, Method: Composition-based stats.
Identities = 48/202 (23%), Positives = 74/202 (36%), Gaps = 54/202 (26%)
Query: 69 AYHVNNLLSPVLFYEAL----QHVPENA-----VVIEIAPHALLQAIIKRAKPGAVSIGL 119
+Y NN++SPV F + + +H+ N V IE+APH LQ +K+ P +
Sbjct: 778 SYVFNNIVSPVKFSQTISNLYKHIESNQLGNDIVFIELAPHPTLQFYLKQMIPKPTN--- 834
Query: 120 TKRGAPDLPAHLLSGLGKLYN--AGLQPRLNQLLPPVKFPV------------GRGTPMI 165
+ + + S L K N +Q ++QL + V G I
Sbjct: 835 -DDNSIEFKVSVYSALNKKNNDIEEIQRTISQLYCDNGYNVNFKCQFQHDDTHGSINSNI 893
Query: 166 QSL-------VEWDHSTEW----SVASFAGKG--------------GSRSGECVIDVDLS 200
L +WD W S++ G S+S E ID+
Sbjct: 894 NQLSNISLPHYQWDDEKYWKEDPSISKLIVNGPQTDNLGYLNENSPNSKSYETFIDI--K 951
Query: 201 KEEDAYLSGHAIDGRILFPATG 222
+ YL GH + G+ FP G
Sbjct: 952 RPPFQYLKGHMVKGKYYFPGCG 973
>sp|B0G0Z9|PKS6_DICDI Probable polyketide synthase 6 OS=Dictyostelium discoideum GN=pks6
PE=3 SV=1
Length = 2924
Score = 36.2 bits (82), Expect = 0.48, Method: Composition-based stats.
Identities = 68/326 (20%), Positives = 126/326 (38%), Gaps = 72/326 (22%)
Query: 70 YHVNNLLSPVLFYEAL----QHVPENA-----VVIEIAPHALLQAIIKRAKPGAVSIGLT 120
Y +N++ PV F + + +H+ N V IEIAPH L IK+ P +++ ++
Sbjct: 792 YVYDNIIKPVKFTQTISNIYKHIESNQLDNDIVFIEIAPHPTLSFYIKQMVPSSLNESVS 851
Query: 121 -------KRGAPDLPAHLLSGL--GKLYNAGLQPRLNQLLPPVKFPVGRGTPMIQSLVEW 171
K+ + +S L YN + + N + + L +W
Sbjct: 852 VYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNLNIEL--------PLYQW 903
Query: 172 DHSTEWSVASFAGKGGSRSGECVID-------------------VDLSKEEDAYLSGHAI 212
S E A R G ID +D++ + YL GH +
Sbjct: 904 --SDELYFAQNQVLEQHRKGGPPIDHLGLSNSYYSPFKNSYKTLIDINYKPFQYLKGHMV 961
Query: 213 DGRILFPATGTEEAVEHFLQKIESIPRDDEF------IALLHEIHNTNI---AGHPYRGY 263
G+ FP G + + + + EF I +++ TNI YR
Sbjct: 962 KGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQYLQTNIQQTGKSEYRAQ 1021
Query: 264 TVLSDNSATH--ELAVSEFELCESGSVAVSGRIRTPEDVSKEQLDLPELTPAISSEMLEL 321
D+ + + + S F+L + G+ S +++ K + +L +LT
Sbjct: 1022 FHFKDHKSNEWIQSSNSNFQLLDHGNDIPSN--YNIKEIIKNKCNLSKLT---------- 1069
Query: 322 SSADVYKDLRLR-GYDYSGAFRGVSQ 346
++YK+++ + G +Y+G F+GV++
Sbjct: 1070 -KNELYKNIKSKTGLNYTGVFQGVTE 1094
>sp|Q54ED7|PKS40_DICDI Probable polyketide synthase 40 OS=Dictyostelium discoideum
GN=pks40 PE=3 SV=1
Length = 2552
Score = 35.0 bits (79), Expect = 1.0, Method: Composition-based stats.
Identities = 51/193 (26%), Positives = 75/193 (38%), Gaps = 44/193 (22%)
Query: 70 YHVNNLLSPVLFYEAL----QHVPENAVV---------IEIAPHALLQAIIKRAKP---- 112
Y +N+++PV F + +H+ N V IEIAPH L +K+ P
Sbjct: 786 YVYDNIINPVRFTNTISNIYKHIELNYSVNNNSNEIIFIEIAPHPTLSFYLKQMVPEDKK 845
Query: 113 GAVSI--GLTKRGAPDL--PAHLLSGLGKL-YNA-GLQPRLNQLLPPVKFPVGRGTPMIQ 166
+VSI L+K+ + DL L+S L L YN G +L+ L P+ Q
Sbjct: 846 QSVSIFSPLSKKKSNDLFEIQKLISELYCLGYNGIGFNIQLSNLNENDNIQTSLSLPLYQ 905
Query: 167 SLVEWDHSTEWSVASFAGK-----------GGSRSGEC------VIDVDLSKEEDAYLSG 209
W+ W + S G S S +D+ K+ +L G
Sbjct: 906 ----WEEQEYWKLDSLYQHHLSNGPSINHLGISNSNHTPYIKSYQTHIDIQKKPFQWLKG 961
Query: 210 HAIDGRILFPATG 222
H I G+ FP G
Sbjct: 962 HQIKGKYYFPGCG 974
>sp|Q558W4|PKS15_DICDI Probable polyketide synthase 15 OS=Dictyostelium discoideum GN=pks15
PE=3 SV=2
Length = 3174
Score = 34.7 bits (78), Expect = 1.5, Method: Composition-based stats.
Identities = 44/202 (21%), Positives = 73/202 (36%), Gaps = 55/202 (27%)
Query: 70 YHVNNLLSPVLFYEAL----QHVPENA-----VVIEIAPHALLQAIIKRAKP-------G 113
Y NN++ PV F + + +H+ N V IE+APH LQ +K+ P G
Sbjct: 885 YIYNNIVEPVKFSQTISNLYKHIEINKLGTDIVFIELAPHPTLQFYLKQMIPVSTNYFSG 944
Query: 114 AVSIGLTKRGAPDLPAHLLSGLGKLYNAGLQPRLNQLLPPVKFPVGRGTPMIQSLV---- 169
+SI + + + KLY + R N +F G +++
Sbjct: 945 KISIYSPLHKKKNDTMEIQKTIAKLY---CENRYNINFKS-QFDCGSINNHNHTVIPPLQ 1000
Query: 170 ----------EWDHSTEWS-------------------VASFAGKGGSRSGECVIDVDLS 200
+WD W ++++ +S + ID+
Sbjct: 1001 QPQPQPLPNYQWDDEKYWKEDLIQQKHRIEGPPIDILGLSNYDNSSNVKSYQTFIDI--K 1058
Query: 201 KEEDAYLSGHAIDGRILFPATG 222
KE YL GH ++G+ FP G
Sbjct: 1059 KEPFKYLKGHIVNGKYYFPGCG 1080
>sp|B0G138|PKS21_DICDI Probable polyketide synthase 21 OS=Dictyostelium discoideum GN=pks21
PE=3 SV=1
Length = 2779
Score = 34.3 bits (77), Expect = 1.7, Method: Composition-based stats.
Identities = 73/342 (21%), Positives = 126/342 (36%), Gaps = 67/342 (19%)
Query: 56 DHWGTPLAQQSSPAYHVNNLLSPVLFYEAL----QHVPENA-----VVIEIAPHALLQAI 106
+H TP + +Y N++ PV F + + QH+ N + IE++PH L
Sbjct: 780 NHETTPF----NSSYVYENIIQPVRFSQTISNLYQHIENNKLGNELIFIEVSPHPSLSFY 835
Query: 107 IKRAKPGAVS--------IGLTKRGAPDLPAHLLSGLGKLYNAGLQPRLNQLLPPVKFPV 158
+K+ P + S K+ + DL + S + ++Y G V
Sbjct: 836 LKQMIPKSSSYFNSVSVLTSTNKKNSNDLD-EIHSTISQIYCLGYDVNFKCQFNHNDDDV 894
Query: 159 G--RGTPMIQSL--VEWDHSTEWSV------------ASFAGKGGS--------RSGECV 194
R + + SL ++D W V F G S +S E +
Sbjct: 895 SSIRNSKVNISLPNYQFDEQHYWKVDINFEQYRLNGPNVFNSLGKSMINYSSNNKSYESI 954
Query: 195 IDVDLSKEEDAYLSGHAIDGRILFPATGTEEAVEHFLQKIESIPRDDEFIA---LLHEIH 251
ID++ + YL H + G+ FP G + + + I + EF+A L +
Sbjct: 955 IDIN--RNPFKYLKDHIVKGKYYFPGIGYADNIMKLYPNQDIIINNLEFLAPFVLKENVK 1012
Query: 252 NT------NIAGHPYRGYTVLSDNSATHELAVSEFELCESGSVAVSGRIRTPEDVSKEQL 305
+T + YR + DN + + C +S + + SK
Sbjct: 1013 HTLQTNVYQLGNTDYRVTFNIKDNKTNQWV-----QTCTGNFQLISLKDNNNDHSSK--Y 1065
Query: 306 DLPELTPAISSEMLELSSADVYKDLR-LRGYDYSGAFRGVSQ 346
D+ +L LS +VYK R + G + GAF+G+ +
Sbjct: 1066 DINQLLS--ECNFTTLSKQEVYKHSRSITGITHLGAFQGIEE 1105
>sp|Q55E72|PKS1_DICDI Probable polyketide synthase 1 OS=Dictyostelium discoideum GN=stlA
PE=1 SV=1
Length = 3147
Score = 34.3 bits (77), Expect = 1.7, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 11/57 (19%)
Query: 69 AYHV-NNLLSPVLFYEALQ--------HVPENAVVI--EIAPHALLQAIIKRAKPGA 114
A H+ +N+ PVLF + ++ H P N VI EIAPH L ++IK++ P +
Sbjct: 831 AQHIYDNVREPVLFQKTIESITSYIKSHYPSNQKVIYVEIAPHPTLFSLIKKSIPSS 887
>sp|Q7TXK8|MSL7_MYCBO Phenolphthiocerol synthesis polyketide synthase type I Pks15/1
OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
GN=pks15/1 PE=1 SV=1
Length = 2112
Score = 34.3 bits (77), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 125/315 (39%), Gaps = 62/315 (19%)
Query: 67 SPAYHVNNLLSPVLFYEALQHVPENAVV--IEIAPHALLQAIIKR--AKPGAVSIGLTKR 122
S Y V+++ PV F ++ +H+ IE P + L I++ A A+ + + +
Sbjct: 812 SAQYWVDHVRRPVRFADSARHLQTLGATHFIEAGPGSGLTGSIEQSLAPAEAMVVSMLGK 871
Query: 123 GAPDLPAHLLSGLGKLYNAGLQPRLNQLLPP-----VKFPVGRGTPMIQSLVEWDHSTEW 177
P+L A L G+++ G+ + + + V+ P T Q W+
Sbjct: 872 DRPEL-ASALGAAGQVFTTGVPVQWSAVFAGSGGRRVQLP----TYAFQRRRFWETPGAD 926
Query: 178 SVASFAGKG-GSR-------------SGECVIDVDLSKEEDAYLSGHAIDGRILFPATGT 223
A AG G G+ S E V+ LS + +L+ H ++G +LFP G
Sbjct: 927 GPADAAGLGLGATEHALLGAVVERPDSDEVVLTGRLSLADQPWLADHVVNGVVLFPGAGF 986
Query: 224 EEAVEHFLQKIESIPRDDEF-IALLHE-IHNTNIAGHPYRGYTVLSDNSATHE---LAVS 278
E V I DE AL+ E + + HP G V A E AVS
Sbjct: 987 VELV---------IRAGDEVGCALIEELVLAAPLVMHPGVGVQVQVVVGAADESGHRAVS 1037
Query: 279 EFE---------LCESGSVAVSGRIRTPEDVSKEQLDLPELTPAISSEMLELSSADVYKD 329
+ L G + V+ TP D+S + P +E +++S D Y
Sbjct: 1038 VYSRGDQSQGWLLNAEGMLGVAA-AETPMDLS--------VWPPEGAESVDIS--DGYAQ 1086
Query: 330 LRLRGYDYSGAFRGV 344
L RGY Y AF+G+
Sbjct: 1087 LAERGYAYGPAFQGL 1101
>sp|P96285|PKS1_MYCTU Putative inactive phenolphthiocerol synthesis polyketide synthase
type I Pks1 OS=Mycobacterium tuberculosis GN=pks1 PE=3
SV=4
Length = 1616
Score = 33.5 bits (75), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 125/315 (39%), Gaps = 62/315 (19%)
Query: 67 SPAYHVNNLLSPVLFYEALQHVPENAVV--IEIAPHALLQAIIKR--AKPGAVSIGLTKR 122
S Y V+++ PV F ++ +H+ IE P + L I++ A A+ + + +
Sbjct: 316 SAQYWVDHVRRPVRFADSARHLQTLGATHFIEAGPGSGLTGSIEQSLAPAEAMVVSMLGK 375
Query: 123 GAPDLPAHLLSGLGKLYNAGLQPRLNQLLPP-----VKFPVGRGTPMIQSLVEWDHSTEW 177
P+L A L G+++ G+ + + + V+ P T Q W+
Sbjct: 376 DRPEL-ASALGAAGQVFTTGVPVQWSAVFAGSGGRRVQLP----TYAFQRRRFWETPGAD 430
Query: 178 SVASFAGKG-GSR-------------SGECVIDVDLSKEEDAYLSGHAIDGRILFPATGT 223
A AG G G+ S E V+ LS + +L+ H ++G +LFP G
Sbjct: 431 GPADAAGLGLGATEHALLGAVVERPDSDEVVLTGRLSLADQPWLADHVVNGVVLFPGAGF 490
Query: 224 EEAVEHFLQKIESIPRDDEF-IALLHE-IHNTNIAGHPYRGYTVLSDNSATHE---LAVS 278
E V I DE AL+ E + + HP G V A E AVS
Sbjct: 491 VELV---------IRAGDEVGCALIEELVLAAPLVMHPGVGVQVQVVVGAADESGHRAVS 541
Query: 279 EFE---------LCESGSVAVSGRIRTPEDVSKEQLDLPELTPAISSEMLELSSADVYKD 329
+ L G + V+ TP D+S + P +E +++S D Y
Sbjct: 542 VYSRGDQSQGWLLNAEGMLGVAA-AETPMDLS--------VWPPEGAESVDIS--DGYAQ 590
Query: 330 LRLRGYDYSGAFRGV 344
L RGY Y AF+G+
Sbjct: 591 LAERGYAYGPAFQGL 605
>sp|B2HIL7|MSL7_MYCMM Phenolphthiocerol synthesis polyketide synthase type I Pks15/1
OS=Mycobacterium marinum (strain ATCC BAA-535 / M)
GN=pks15/1 PE=1 SV=1
Length = 2104
Score = 33.5 bits (75), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 121/310 (39%), Gaps = 52/310 (16%)
Query: 67 SPAYHVNNLLSPVLFYEALQHVPENAVV--IEIAPHALLQAIIKR--AKPGAVSIGLTKR 122
S Y V ++ V F ++ + + V +E+ P + L I++ A AV + + +
Sbjct: 806 SAQYWVEHVRRAVRFADSARQLHTLGVTHFVEVGPGSGLTGSIEQSLAPAEAVVVSMLGK 865
Query: 123 GAPDLPAHLLSGLGKLYNAGLQPRLNQLLPPVKFPVGRGTPMIQSLVEWDHSTEWSV--- 179
P++ A +L+ G+L++ G+ P F T + + W V
Sbjct: 866 DRPEV-ASVLTAFGQLFSTGMSVDW-----PAVFAGSGATRVDLPTYAFQRRRFWEVPGA 919
Query: 180 -----ASFAGKGGSR------------SGECVIDVDLSKEEDAYLSGHAIDGRILFPATG 222
A+ G GG+ SG V+ L+ + +L+ H I G +LFP G
Sbjct: 920 DGPADATGLGLGGAEHALLGAVVERPDSGGVVLTGRLALADQPWLADHVIGGVVLFPGAG 979
Query: 223 TEEAVEHFLQKIESIPRDDEF-IALLHE-IHNTNIAGHPYRGYTV-----LSDNSATHEL 275
E +I DE A++ E + + HP G V +D+S L
Sbjct: 980 FVEL---------AIRAGDEVGCAVVEELVLAAPLVLHPGMGVQVQVIVGAADDSGNRAL 1030
Query: 276 AV-SEFELCESGSVAVSGRIRTPEDVSKEQLDLPELTPAISSEMLELSSADVYKDLRLRG 334
+V S + E + G + S L + P +E +++S D Y L RG
Sbjct: 1031 SVYSRGDQSEDWLLNAEGMLGVEAASSGADL---SVWPPEGAESVDIS--DGYAQLADRG 1085
Query: 335 YDYSGAFRGV 344
Y Y F+G+
Sbjct: 1086 YAYGPGFQGL 1095
>sp|Q28C74|LPPRC_XENTR Leucine-rich PPR motif-containing protein, mitochondrial OS=Xenopus
tropicalis GN=lrpprc PE=2 SV=1
Length = 1391
Score = 33.5 bits (75), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 9/91 (9%)
Query: 213 DGRILFPATGTEEAVEHFLQKI-------ESIPRDDEFIALLHEIHNTN--IAGHPYRGY 263
DGR A+G EAV +FL + E +++ H++ N N I+ + YRG
Sbjct: 556 DGRYCQAASGPNEAVGYFLYNLIDSMSDAEVQAKEEHLRQYFHQLKNANIVISANIYRGI 615
Query: 264 TVLSDNSATHELAVSEFELCESGSVAVSGRI 294
L D+S EL L +S S I
Sbjct: 616 RNLLDSSHVPELIKDVIVLVDSQETLTSSDI 646
>sp|Q86JI5|PKS5_DICDI Probable polyketide synthase 5 OS=Dictyostelium discoideum GN=pks5
PE=2 SV=1
Length = 2512
Score = 33.1 bits (74), Expect = 4.0, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 12/69 (17%)
Query: 60 TPLAQQSSP---AYHVNNLLSPVLFYEAL----QHVPENA-----VVIEIAPHALLQAII 107
T L +S P Y +N+++PV F + + +H+ N V IEIAPH L I
Sbjct: 782 TNLFNESDPFNSQYVYDNIINPVKFTQTISNIYKHIESNQLDNDIVFIEIAPHPTLSFYI 841
Query: 108 KRAKPGAVS 116
K+ P +++
Sbjct: 842 KQMVPSSLN 850
>sp|Q13423|NNTM_HUMAN NAD(P) transhydrogenase, mitochondrial OS=Homo sapiens GN=NNT PE=1
SV=3
Length = 1086
Score = 32.3 bits (72), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 77 SPVLF-YEALQHVPENAVVIEIAPHALLQAIIKRAKPGAVSI--GLTKRGAPDLPAHLLS 133
+PVLF E ++ + E +VV+++A A + KPG + I G+T G DLP+ + +
Sbjct: 325 APVLFNKEMIESMKEGSVVVDLAAEA--GGNFETTKPGELYIHKGITHIGYTDLPSRMAT 382
Query: 134 GLGKLYNAGLQPRLNQLLP 152
LY+ + L + P
Sbjct: 383 QASTLYSNNITKLLKAISP 401
>sp|Q8ZQQ2|SLRP_SALTY E3 ubiquitin-protein ligase SlrP OS=Salmonella typhimurium (strain
LT2 / SGSC1412 / ATCC 700720) GN=slrP PE=1 SV=1
Length = 765
Score = 32.3 bits (72), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 368 TMLQFSILGINTRELYLPTRMQRVCIDPAKHKALVETLSGDKKTV 412
T L+ ILG+ T Y+P ++ + +D + K+L E L G+ KT+
Sbjct: 181 TELRLKILGLTTIPAYIPEQITTLILDNNELKSLPENLQGNIKTL 225
>sp|D0ZRB2|SLRP_SALT1 E3 ubiquitin-protein ligase SlrP OS=Salmonella typhimurium (strain
14028s / SGSC 2262) GN=slrP PE=3 SV=1
Length = 765
Score = 32.3 bits (72), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 368 TMLQFSILGINTRELYLPTRMQRVCIDPAKHKALVETLSGDKKTV 412
T L+ ILG+ T Y+P ++ + +D + K+L E L G+ KT+
Sbjct: 181 TELRLKILGLTTIPAYIPEQITTLILDNNELKSLPENLQGNIKTL 225
>sp|Q61941|NNTM_MOUSE NAD(P) transhydrogenase, mitochondrial OS=Mus musculus GN=Nnt PE=1
SV=2
Length = 1086
Score = 32.0 bits (71), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 77 SPVLF-YEALQHVPENAVVIEIAPHALLQAIIKRAKPGAVSI--GLTKRGAPDLPAHLLS 133
+PVLF E ++ + E +VV+++A A + KPG + + G+T G DLP+ + +
Sbjct: 325 APVLFSKEMIESMKEGSVVVDLAAEA--GGNFETTKPGELYVHKGITHIGYTDLPSRMAT 382
Query: 134 GLGKLYNAGLQPRLNQLLP 152
LY+ + L + P
Sbjct: 383 QASTLYSNNITKLLKAISP 401
>sp|Q0U6X2|MAK5_PHANO ATP-dependent RNA helicase MAK5 OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=MAK5 PE=3 SV=1
Length = 817
Score = 32.0 bits (71), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Query: 203 EDAYLSGHAIDGRILFPATGTEEAVEHFLQKIESIPRDDEFIALLHEIHNTNIAGHPYRG 262
ED ++ A+ G + F T T+E +E ++K + R++E L +I G P G
Sbjct: 64 EDVHVVKDAVTGNLSFETTKTDEQIEQDIEK--AWQREEEEAKFLEKI---TFGGEPKNG 118
Query: 263 YTVLSDNSATHELAV 277
V+ + +A E V
Sbjct: 119 EDVVEEETAPVEDTV 133
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 164,907,614
Number of Sequences: 539616
Number of extensions: 7324865
Number of successful extensions: 17817
Number of sequences better than 100.0: 38
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 17746
Number of HSP's gapped (non-prelim): 72
length of query: 418
length of database: 191,569,459
effective HSP length: 120
effective length of query: 298
effective length of database: 126,815,539
effective search space: 37791030622
effective search space used: 37791030622
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)