BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9442
(127 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P19096|FAS_MOUSE Fatty acid synthase OS=Mus musculus GN=Fasn PE=1 SV=2
Length = 2504
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 48/61 (78%)
Query: 1 MAAVGLSWEEVKARAPADIVAACHNNVDSVTISGPPAAIDKFVAELSAEGVFAKKVASSG 60
MAAVGLSWEE K R PA +V ACHN+ D+VTISGP AA+++FV +L EGVFAK+V + G
Sbjct: 620 MAAVGLSWEECKQRCPAGVVPACHNSEDTVTISGPQAAVNEFVEQLKQEGVFAKEVRTGG 679
Query: 61 F 61
Sbjct: 680 L 680
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 41/68 (60%)
Query: 60 GFTGKLDWTGNWISYIDTMLQFSILGINTRELYLPTRMQRVCIDPAKHKALVETLSGDKK 119
G GKL W NW++++DTMLQ SILG + + L LPTR+ + IDPA H+ V L D +
Sbjct: 1016 GEQGKLLWKDNWVTFMDTMLQVSILGSSQQSLQLPTRVTAIYIDPATHRQKVYRLKEDTQ 1075
Query: 120 TVPVAMYR 127
V R
Sbjct: 1076 VADVTTSR 1083
>sp|P12785|FAS_RAT Fatty acid synthase OS=Rattus norvegicus GN=Fasn PE=1 SV=3
Length = 2505
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 47/61 (77%)
Query: 1 MAAVGLSWEEVKARAPADIVAACHNNVDSVTISGPPAAIDKFVAELSAEGVFAKKVASSG 60
MAAVGLSWEE K R P +V ACHN+ D+VTISGP AA+++FV +L EGVFAK+V + G
Sbjct: 620 MAAVGLSWEECKQRCPPGVVPACHNSEDTVTISGPQAAVNEFVEQLKQEGVFAKEVRTGG 679
Query: 61 F 61
Sbjct: 680 L 680
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 49 EGVFAKKVASSGFTGKLDWTGNWISYIDTMLQFSILGINTRELYLPTRMQRVCIDPAKHK 108
+GV+ + G GKL W NW++++DTMLQ SILG + + L LPTR+ + IDPA H
Sbjct: 1007 QGVYEATL--EGEQGKLLWKDNWVTFMDTMLQISILGFSKQSLQLPTRVTAIYIDPATHL 1064
Query: 109 ALVETLSGDKKTVPVAMYR 127
V L GD + V R
Sbjct: 1065 QKVYMLEGDTQVADVTTSR 1083
>sp|Q71SP7|FAS_BOVIN Fatty acid synthase OS=Bos taurus GN=FASN PE=2 SV=1
Length = 2513
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 46/61 (75%)
Query: 1 MAAVGLSWEEVKARAPADIVAACHNNVDSVTISGPPAAIDKFVAELSAEGVFAKKVASSG 60
MAAVGL+WEE K R P IV ACHN +D+VTISGP A++ +FV +L EGVFAK+V + G
Sbjct: 620 MAAVGLTWEECKQRCPPGIVPACHNCIDTVTISGPQASMLEFVQQLKQEGVFAKEVRTGG 679
Query: 61 F 61
Sbjct: 680 M 680
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 44/73 (60%)
Query: 55 KVASSGFTGKLDWTGNWISYIDTMLQFSILGINTRELYLPTRMQRVCIDPAKHKALVETL 114
+ +S G TG+L W NW++++DTMLQ SIL + R L LPTR+ + I PA H+ + TL
Sbjct: 1014 EASSEGNTGQLLWKDNWVTFMDTMLQMSILAPSKRSLRLPTRITAIYIHPATHQQKLYTL 1073
Query: 115 SGDKKTVPVAMYR 127
+ V + R
Sbjct: 1074 QDKTQVADVVINR 1086
>sp|P49327|FAS_HUMAN Fatty acid synthase OS=Homo sapiens GN=FASN PE=1 SV=3
Length = 2511
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 45/61 (73%)
Query: 1 MAAVGLSWEEVKARAPADIVAACHNNVDSVTISGPPAAIDKFVAELSAEGVFAKKVASSG 60
MAAVGLSWEE K R P +V ACHN+ D+VTISGP A + +FV +L EGVFAK+V + G
Sbjct: 620 MAAVGLSWEECKQRCPPGVVPACHNSKDTVTISGPQAPVFEFVEQLRKEGVFAKEVRTGG 679
Query: 61 F 61
Sbjct: 680 M 680
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 42/68 (61%)
Query: 60 GFTGKLDWTGNWISYIDTMLQFSILGINTRELYLPTRMQRVCIDPAKHKALVETLSGDKK 119
G +G+L W NW+S++DTMLQ SILG LYLPTR+ + IDPA H+ + TL +
Sbjct: 1015 GDSGRLLWKDNWVSFMDTMLQMSILGSAKHGLYLPTRVTAIHIDPATHRQKLYTLQDKAQ 1074
Query: 120 TVPVAMYR 127
V + R
Sbjct: 1075 VADVVVSR 1082
>sp|P12276|FAS_CHICK Fatty acid synthase OS=Gallus gallus GN=FASN PE=1 SV=5
Length = 2512
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 46/60 (76%)
Query: 1 MAAVGLSWEEVKARAPADIVAACHNNVDSVTISGPPAAIDKFVAELSAEGVFAKKVASSG 60
MAAVGL+WEE K R P ++V ACHN+ D+VT+SGP ++ +FV +L +GVFAK+V +G
Sbjct: 619 MAAVGLTWEECKQRCPPNVVPACHNSEDTVTVSGPLDSVSEFVTKLKKDGVFAKEVRRAG 678
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%)
Query: 58 SSGFTGKLDWTGNWISYIDTMLQFSILGINTRELYLPTRMQRVCIDPAKHKALV 111
S G GK+ W GNW++++DT+L +L R L LPTR++ V IDP H+ V
Sbjct: 1016 SEGSAGKILWNGNWVTFLDTLLHLIVLAETGRSLRLPTRIRSVYIDPVLHQEQV 1069
>sp|Q03131|ERYA1_SACER Erythronolide synthase, modules 1 and 2 OS=Saccharopolyspora
erythraea GN=eryA PE=1 SV=1
Length = 3491
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 49/107 (45%), Gaps = 16/107 (14%)
Query: 1 MAAVGLSWEEVK---ARAPADIVAACHNNVDSVTISGPPAAIDKFVAELSAEGVFAKKVA 57
MAAV LS +E++ AR D+V A N SV ++G P + + V ELSAEGV A+ +
Sbjct: 183 MAAVALSADEIEPRIARWDDDVVLAGVNGPRSVLLTGSPEPVARRVQELSAEGVRAQVIN 242
Query: 58 SS-------------GFTGKLDWTGNWISYIDTMLQFSILGINTREL 91
S G L W S + + ++TREL
Sbjct: 243 VSMAAHSAQVDDIAEGMRSALAWFAPGGSEVPFYASLTGGAVDTREL 289
>sp|Q0C8M3|LNKS_ASPTN Lovastatin nonaketide synthase OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=lovB PE=3 SV=2
Length = 3038
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Query: 1 MAAVGLSWEEVKARAPAD-----IVAACHNNVDSVTISGPPAAIDKFVAELSAEGVFAK 54
M A G+S+EE + D I A N+ DSVT SG AID + L E FA+
Sbjct: 696 MLAAGMSFEEAQEICELDAFEGRICVAASNSPDSVTFSGDANAIDHLKSMLEDESTFAR 754
>sp|Q9Y8A5|LNKS_ASPTE Lovastatin nonaketide synthase OS=Aspergillus terreus GN=lovB PE=1
SV=1
Length = 3038
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Query: 1 MAAVGLSWEEVKARAPAD-----IVAACHNNVDSVTISGPPAAIDKFVAELSAEGVFAK 54
M A G+S+EE + D I A N+ DSVT SG AID L E FA+
Sbjct: 696 MLAAGMSFEEAQEICELDAFEGRICVAASNSPDSVTFSGDANAIDHLKGMLEDESTFAR 754
>sp|Q558W4|PKS15_DICDI Probable polyketide synthase 15 OS=Dictyostelium discoideum
GN=pks15 PE=3 SV=2
Length = 3174
Score = 34.3 bits (77), Expect = 0.26, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 26/41 (63%)
Query: 18 DIVAACHNNVDSVTISGPPAAIDKFVAELSAEGVFAKKVAS 58
DI AC+N+ +S+ + G +++ EL +G+F+K +AS
Sbjct: 777 DIEIACYNSPNSIVLGGKEQQLNQISNELKDKGIFSKMLAS 817
>sp|Q558Y6|PKS14_DICDI Probable polyketide synthase 14 OS=Dictyostelium discoideum
GN=pks14 PE=3 SV=2
Length = 2998
Score = 32.7 bits (73), Expect = 0.69, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 1 MAAVGLSWEEV-----KARAPADIVAACHNNVDSVTISGPPAAIDKFVAELSAEGVFAKK 55
M ++G+S E+ + P DI AC+N+ +S+ + G +++ EL +G+F+
Sbjct: 706 MLSIGISSEDYLSSNYSTKYP-DIEIACYNSPNSIVLGGNEQQLNQISNELKDKGIFSTM 764
Query: 56 VAS 58
+AS
Sbjct: 765 LAS 767
>sp|Q8ZQQ2|SLRP_SALTY E3 ubiquitin-protein ligase SlrP OS=Salmonella typhimurium (strain
LT2 / SGSC1412 / ATCC 700720) GN=slrP PE=1 SV=1
Length = 765
Score = 32.7 bits (73), Expect = 0.71, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 77 TMLQFSILGINTRELYLPTRMQRVCIDPAKHKALVETLSGDKKTV 121
T L+ ILG+ T Y+P ++ + +D + K+L E L G+ KT+
Sbjct: 181 TELRLKILGLTTIPAYIPEQITTLILDNNELKSLPENLQGNIKTL 225
>sp|D0ZRB2|SLRP_SALT1 E3 ubiquitin-protein ligase SlrP OS=Salmonella typhimurium (strain
14028s / SGSC 2262) GN=slrP PE=3 SV=1
Length = 765
Score = 32.7 bits (73), Expect = 0.71, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 77 TMLQFSILGINTRELYLPTRMQRVCIDPAKHKALVETLSGDKKTV 121
T L+ ILG+ T Y+P ++ + +D + K+L E L G+ KT+
Sbjct: 181 TELRLKILGLTTIPAYIPEQITTLILDNNELKSLPENLQGNIKTL 225
>sp|B0G103|PKS10_DICDI Probable polyketide synthase 10 OS=Dictyostelium discoideum
GN=pks10 PE=3 SV=1
Length = 2485
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 17 ADIVAACHNNVDSVTISGPPAAIDKFVAELSAEGVFAKKVAS 58
AD+ AC+N+ +S+ ++G +++ EL FA +AS
Sbjct: 703 ADLEIACYNSQNSIVVAGNEHKLNQLFNELKENNEFATMIAS 744
>sp|Q54ED7|PKS40_DICDI Probable polyketide synthase 40 OS=Dictyostelium discoideum
GN=pks40 PE=3 SV=1
Length = 2552
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 13 ARAPADIVAACHNNVDSVTISGPPAAIDKFVAELSAEGVFAKKVAS 58
+R P ++ AC+N+ S+ I+G +++ + EL +GVF + S
Sbjct: 693 SRYP-ELEIACYNSPSSIVIAGKELILNEIIKELKQDGVFCTILGS 737
>sp|Q54ED6|PKS41_DICDI Probable polyketide synthase 41 OS=Dictyostelium discoideum
GN=pks41 PE=3 SV=1
Length = 2542
Score = 30.4 bits (67), Expect = 3.4, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 13 ARAPADIVAACHNNVDSVTISGPPAAIDKFVAELSAEGVFAKKVAS 58
+R P ++ AC+N+ S+ I+G +++ + EL +GVF + S
Sbjct: 692 SRYP-ELEIACYNSPSSIVIAGKELILNEIIKELKKDGVFCAILGS 736
>sp|O80970|NPY2_ARATH BTB/POZ domain-containing protein NPY2 OS=Arabidopsis thaliana
GN=NPY2 PE=2 SV=1
Length = 634
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 25/112 (22%)
Query: 25 NNVDSVTISGPPAAIDKF----------VAELSAEGVFAKKVASS--GFTGKLDWTGNWI 72
NN+D + ISG P F LSA V A + A+ G ++ GN I
Sbjct: 64 NNIDDIDISGIPGGPTAFETCAKFCYGMTVTLSAYNVVATRCAAEYLGMHETVE-KGNLI 122
Query: 73 SYIDTML--------QFSILGINTRELYLP----TRMQRVCIDPAKHKALVE 112
ID L + SI+ + T + +LP ++ +CID KA V+
Sbjct: 123 YKIDVFLSSSLFRSWKDSIIVLQTTKPFLPLSEDLKLVSLCIDAIATKACVD 174
>sp|Q03132|ERYA2_SACER Erythronolide synthase, modules 3 and 4 OS=Saccharopolyspora
erythraea GN=eryA PE=1 SV=3
Length = 3567
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 1 MAAVGLSWEEVK---ARAPADIVAACHNNVDSVTISGPPAAIDKFVAELSAEGVFAKKVA 57
M +VG S +E++ AR + A N + ++GP A +D+F AE A + +++A
Sbjct: 2143 MVSVGASRDELETVLARWDGRVAVAAVNGPGTSVVAGPTAELDEFFAEAEAREMKPRRIA 2202
>sp|A0JMI9|RRF2M_DANRE Ribosome-releasing factor 2, mitochondrial OS=Danio rerio GN=gfm2
PE=2 SV=2
Length = 762
Score = 29.3 bits (64), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 9 EEVKARAPADIVAACHNNVDSVTISGP 35
E+VKA PAD+ A N V S + GP
Sbjct: 596 EDVKAMLPADVREAVENGVQSAYLQGP 622
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.132 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,338,763
Number of Sequences: 539616
Number of extensions: 1664178
Number of successful extensions: 4004
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 3974
Number of HSP's gapped (non-prelim): 32
length of query: 127
length of database: 191,569,459
effective HSP length: 93
effective length of query: 34
effective length of database: 141,385,171
effective search space: 4807095814
effective search space used: 4807095814
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)