Query psy9442
Match_columns 127
No_of_seqs 176 out of 1426
Neff 7.8
Searched_HMMs 29240
Date Fri Aug 16 19:28:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9442.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9442hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4amm_A DYNE8; transferase; 1.4 99.8 8.5E-21 2.9E-25 150.0 5.5 115 1-115 215-341 (401)
2 3ptw_A Malonyl COA-acyl carrie 99.8 8.4E-21 2.9E-25 147.0 4.9 117 1-117 131-265 (336)
3 3tzy_A Polyketide synthase PKS 99.8 3.1E-20 1.1E-24 150.1 6.7 117 1-117 274-408 (491)
4 2h1y_A Malonyl coenzyme A-acyl 99.8 1.1E-20 3.9E-25 145.5 3.9 117 1-117 144-276 (321)
5 2qc3_A MCT, malonyl COA-acyl c 99.8 2.2E-20 7.7E-25 142.7 5.0 116 1-117 132-261 (303)
6 3ezo_A Malonyl COA-acyl carrie 99.8 2.5E-20 8.7E-25 143.2 5.3 117 1-117 138-273 (318)
7 1nm2_A Malonyl COA:acyl carrie 99.8 1.1E-20 3.8E-25 145.2 3.3 116 1-116 138-267 (317)
8 2cuy_A Malonyl COA-[acyl carri 99.8 4.8E-20 1.6E-24 141.0 6.6 116 1-116 129-259 (305)
9 3sbm_A DISD protein, DSZD; tra 99.8 3.5E-20 1.2E-24 140.0 5.7 117 1-117 123-256 (281)
10 3im8_A Malonyl acyl carrier pr 99.8 4E-20 1.4E-24 141.5 5.7 117 1-117 130-264 (307)
11 3tqe_A Malonyl-COA-[acyl-carri 99.8 4.9E-20 1.7E-24 141.4 4.8 117 1-117 136-271 (316)
12 3qat_A Malonyl COA-acyl carrie 99.8 5.7E-20 2E-24 141.1 4.9 117 1-117 138-273 (318)
13 3im9_A MCAT, MCT, malonyl COA- 99.8 1E-19 3.4E-24 139.6 5.7 117 1-117 137-273 (316)
14 1mla_A Malonyl-coenzyme A acyl 99.8 1.1E-19 3.7E-24 139.1 5.7 116 1-116 132-266 (309)
15 3k89_A Malonyl COA-ACP transac 99.8 1E-19 3.4E-24 139.6 5.3 117 1-117 134-269 (314)
16 3hhd_A Fatty acid synthase; tr 99.8 2.4E-19 8.4E-24 154.3 8.2 118 1-118 622-758 (965)
17 3g87_A Malonyl COA-acyl carrie 99.8 6E-20 2E-24 145.0 3.4 116 1-116 129-260 (394)
18 2c2n_A Malonyl COA-acyl carrie 99.7 1.6E-18 5.5E-23 134.2 6.7 101 17-117 187-300 (339)
19 2hg4_A DEBS, 6-deoxyerythronol 99.7 1.9E-18 6.5E-23 148.1 5.8 116 1-116 680-810 (917)
20 2qo3_A Eryaii erythromycin pol 99.7 1.8E-18 6.1E-23 148.3 3.9 116 1-116 664-794 (915)
21 2vz8_A Fatty acid synthase; tr 99.7 1.2E-17 4.1E-22 153.9 7.9 117 1-117 620-755 (2512)
22 2pff_B Fatty acid synthase sub 99.5 3E-15 1E-19 132.5 3.8 113 1-113 338-496 (2006)
23 2uv8_G Fatty acid synthase sub 99.5 1.9E-14 6.5E-19 130.5 5.7 113 1-113 338-496 (2051)
24 2uva_G Fatty acid synthase bet 99.5 3.4E-14 1.2E-18 129.2 6.3 114 1-114 332-490 (2060)
25 3zen_D Fatty acid synthase; tr 99.4 3.5E-14 1.2E-18 132.2 3.9 111 1-116 207-345 (3089)
26 3zen_D Fatty acid synthase; tr 99.4 1.4E-13 4.9E-18 128.2 6.6 116 1-116 1500-1688(3089)
27 2uva_G Fatty acid synthase bet 99.1 7.1E-11 2.4E-15 107.8 6.4 114 1-114 1865-2056(2060)
28 2uv8_G Fatty acid synthase sub 99.0 9.5E-11 3.3E-15 106.7 4.4 115 1-115 1854-2046(2051)
29 2pff_B Fatty acid synthase sub 98.7 1.4E-10 4.8E-15 103.2 -6.9 66 1-68 1809-1889(2006)
30 2ki0_A DS119; beta-alpha-beta, 73.0 2.7 9.1E-05 20.9 2.1 25 29-53 7-31 (36)
31 2vz8_A Fatty acid synthase; tr 70.1 6.6 0.00022 37.5 5.6 87 39-125 989-1082(2512)
32 3dhx_A Methionine import ATP-b 65.7 11 0.00037 23.5 4.5 28 30-57 69-96 (106)
33 2l82_A Designed protein OR32; 62.4 13 0.00045 24.1 4.4 31 30-60 6-36 (162)
34 1q5y_A NIKR, nickel responsive 61.8 12 0.00041 22.5 4.0 31 28-58 49-80 (85)
35 2qrr_A Methionine import ATP-b 58.5 17 0.00058 22.3 4.4 25 32-56 73-97 (101)
36 2qsw_A Methionine import ATP-b 56.8 17 0.00057 22.3 4.1 25 32-56 73-97 (100)
37 3ced_A Methionine import ATP-b 53.7 21 0.00071 21.9 4.2 25 32-56 70-95 (98)
38 2y9k_A Protein INVG; protein t 48.6 32 0.0011 22.3 4.7 44 5-48 83-132 (137)
39 1urr_A CG18505 protein; acylph 44.1 20 0.00069 22.2 3.0 27 24-50 44-73 (102)
40 2vh7_A Acylphosphatase-1; hydr 43.0 20 0.00068 22.1 2.8 27 24-50 41-70 (99)
41 1ulr_A Putative acylphosphatas 42.1 23 0.00079 21.3 3.0 26 24-50 35-63 (88)
42 3trg_A Acylphosphatase; fatty 39.9 28 0.00097 21.4 3.2 26 23-48 44-72 (98)
43 2y3m_A Emhofq, protein transpo 35.4 79 0.0027 20.9 5.2 39 14-52 131-169 (175)
44 4fk8_A Ferredoxin--NADP reduct 35.3 21 0.00072 25.3 2.3 36 27-62 228-263 (271)
45 2ctf_A Vigilin; K homology typ 35.2 59 0.002 20.0 4.2 31 18-48 58-88 (102)
46 4e9j_A General secretion pathw 35.1 71 0.0024 22.6 5.1 56 6-61 123-186 (246)
47 1w2i_A Acylphosphatase; hydrol 35.1 24 0.00083 21.3 2.3 26 24-50 37-65 (91)
48 2hza_A Nickel-responsive regul 34.7 51 0.0018 21.3 4.0 31 28-58 97-128 (133)
49 2l69_A Rossmann 2X3 fold prote 34.6 51 0.0017 20.7 3.7 89 30-118 6-124 (134)
50 2qv5_A AGR_C_5032P, uncharacte 34.5 52 0.0018 24.0 4.4 48 4-54 105-159 (261)
51 3lrx_A Putative hydrogenase; a 33.9 56 0.0019 21.4 4.1 27 27-53 113-139 (158)
52 2nly_A BH1492 protein, diverge 33.7 58 0.002 23.5 4.4 48 4-54 78-132 (245)
53 2bj7_A Nickel responsive regul 33.5 54 0.0018 21.3 3.9 31 28-58 99-130 (138)
54 2ctm_A Vigilin; K homology typ 33.3 45 0.0015 20.3 3.3 21 28-48 61-81 (95)
55 2fhm_A Probable acylphosphatas 32.0 37 0.0013 20.4 2.7 26 24-49 35-63 (91)
56 2wvf_A Hpnikr, putative nickel 31.1 67 0.0023 21.3 4.1 31 28-58 109-140 (148)
57 2kxy_A Uncharacterized protein 30.7 20 0.00068 21.9 1.3 39 18-63 24-63 (100)
58 1aps_A Acylphosphatase; hydrol 30.6 19 0.00065 22.1 1.2 27 24-50 40-69 (98)
59 2f1f_A Acetolactate synthase i 30.5 45 0.0015 22.6 3.2 26 26-51 117-145 (164)
60 4gqr_A Pancreatic alpha-amylas 30.5 40 0.0014 25.7 3.3 23 33-55 73-95 (496)
61 1vig_A Vigilin; RNA-binding pr 29.4 35 0.0012 19.4 2.2 20 29-48 49-68 (71)
62 2gv1_A Probable acylphosphatas 28.9 49 0.0017 19.9 2.9 20 29-48 45-65 (92)
63 1v72_A Aldolase; PLP-dependent 28.2 1.4E+02 0.0049 21.0 5.9 45 6-53 121-176 (356)
64 3e5d_A Putative glyoxalase I; 28.1 68 0.0023 18.9 3.6 22 34-55 80-101 (127)
65 3gr5_A ESCC; secretin, type II 27.3 1.1E+02 0.0036 20.3 4.6 44 5-48 98-148 (156)
66 3lyu_A Putative hydrogenase; t 26.9 62 0.0021 20.8 3.3 25 28-52 109-133 (142)
67 2hh2_A KH-type splicing regula 26.3 90 0.0031 19.2 3.9 22 28-49 55-76 (107)
68 2pc6_A Probable acetolactate s 25.9 37 0.0013 23.1 2.1 26 26-51 118-145 (165)
69 2ab1_A Hypothetical protein; H 24.8 44 0.0015 21.4 2.2 50 6-62 49-101 (122)
70 2fgc_A Acetolactate synthase, 24.5 45 0.0015 23.4 2.4 26 26-51 144-171 (193)
71 2a4x_A Mitomycin-binding prote 24.1 74 0.0025 19.4 3.3 20 35-54 81-100 (138)
72 3fvs_A Kynurenine--oxoglutarat 23.9 1.2E+02 0.0042 22.2 4.9 47 6-54 162-211 (422)
73 2bjd_A Acylphosphatase; hypert 23.7 53 0.0018 20.3 2.4 27 23-49 46-75 (101)
74 3e2y_A Kynurenine-oxoglutarate 23.7 1.2E+02 0.0041 22.1 4.8 47 6-54 155-204 (410)
75 3fcx_A FGH, esterase D, S-form 23.6 62 0.0021 22.0 3.0 38 28-65 217-262 (282)
76 2lxf_A Uncharacterized protein 22.6 96 0.0033 19.9 3.5 25 24-48 67-94 (121)
77 2b7e_A PRE-mRNA processing pro 22.6 58 0.002 18.4 2.1 18 34-51 1-18 (59)
78 1tvc_A Methane monooxygenase c 22.6 73 0.0025 22.1 3.2 32 27-58 210-241 (250)
79 1b5p_A Protein (aspartate amin 21.8 1.8E+02 0.006 21.2 5.4 47 6-54 152-201 (385)
80 3kax_A Aminotransferase, class 20.9 1.1E+02 0.0037 22.0 4.0 47 6-54 144-193 (383)
81 1zzk_A Heterogeneous nuclear r 20.6 84 0.0029 18.2 2.8 21 28-48 52-72 (82)
82 2ctk_A Vigilin; K homology typ 20.5 91 0.0031 19.1 3.0 21 28-48 60-80 (104)
83 2bgi_A Ferredoxin-NADP(H) redu 20.4 58 0.002 23.0 2.4 32 28-59 227-258 (272)
84 1g94_A Alpha-amylase; beta-alp 20.3 81 0.0028 24.2 3.3 23 33-55 61-83 (448)
85 1dtj_A RNA-binding neurooncolo 20.3 65 0.0022 18.2 2.2 21 28-48 51-71 (76)
86 3ht4_A Aluminum resistance pro 20.2 2.5E+02 0.0086 21.4 6.1 48 6-53 153-204 (431)
87 1vkh_A Putative serine hydrola 20.1 1.7E+02 0.0058 19.8 4.8 33 37-69 229-261 (273)
88 1lwj_A 4-alpha-glucanotransfer 20.1 77 0.0026 24.2 3.1 23 33-55 66-88 (441)
No 1
>4amm_A DYNE8; transferase; 1.40A {Micromonospora chersina} PDB: 4amn_A 4amp_A 4amo_A
Probab=99.82 E-value=8.5e-21 Score=149.97 Aligned_cols=115 Identities=14% Similarity=0.090 Sum_probs=98.5
Q ss_pred CeeecCCHHHHHhhCC-CCeEEEEeeCCCceEEeCcHHHHHHHHHHHhhcCceEEEeeccCccccccccccHHHHHhhh-
Q psy9442 1 MAAVGLSWEEVKARAP-ADIVAACHNNVDSVTISGPPAAIDKFVAELSAEGVFAKKVASSGFTGKLDWTGNWISYIDTM- 78 (127)
Q Consensus 1 M~av~~~~~~~~~~l~-~~v~iA~~N~p~~~vvsG~~~~i~~~~~~l~~~g~~~~~L~v~~a~h~~~~~~~~~~~~d~l- 78 (127)
|++|+++.+++++++. .+++|||+|||+++||||+.++|+++.+.|+++|+++++|+|++|||++.|++...+|.+.+
T Consensus 215 M~aV~~~~~~v~~~l~~~~v~iA~~Nsp~~~vvsG~~~al~~~~~~l~~~g~~~~~L~v~~afHS~~m~~~~~~~~~~l~ 294 (401)
T 4amm_A 215 MLSLRADLAAARELAAGTGAVVAVDNGERHVVVAGTRPELDRVAEAARHAGIEATPLAVSHAFHSPLMAPAAEALRRAAG 294 (401)
T ss_dssp EEEESSCHHHHHHHHTTTSCEEEEEEETTEEEEEEEHHHHHHHHHHHHHHTCCEEEBSCSSCTTSGGGHHHHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHhccCCEEEEEEecCCCEEEECCHHHHHHHHHHHHhCCCeEEECCCCCCcchHHHHHHHHHHHHHHh
Confidence 8999999999999997 47999999999999999999999999999999999999999999999998887666665544
Q ss_pred ------hhccccccCccc----ccCceeeeeeEECchhhHHHHhhhc
Q psy9442 79 ------LQFSILGINTRE----LYLPTRMQRVCIDPAKHKALVETLS 115 (127)
Q Consensus 79 ------l~~~v~~~~~~~----~~~p~~i~~~~~~pv~~~~~v~~~~ 115 (127)
...+++++.++. ...+.||.+++++||+|.++++.+.
T Consensus 295 ~~~~~~p~ip~~S~vtg~~~~~~~~~~y~~~~l~~pV~f~~av~~l~ 341 (401)
T 4amm_A 295 RLPWRRPERPVASTVTGAWWADEDPVEVLVRQLTGPVRFREALGLLD 341 (401)
T ss_dssp TSCCCCCSSCEECTTTSSBCCSCCHHHHHHHHHHSCEEHHHHHHHSC
T ss_pred hCCCCCCCceEEECCCCCcCChhHHHHHHHHHHHHHeeHHHHHHHhc
Confidence 244556654332 1237899999999999999999986
No 2
>3ptw_A Malonyl COA-acyl carrier protein transacylase; structural genomics, protein structure initiative; 2.10A {Clostridium perfringens}
Probab=99.81 E-value=8.4e-21 Score=147.04 Aligned_cols=117 Identities=18% Similarity=0.076 Sum_probs=98.6
Q ss_pred Ceee-cCCHHHHHhhCC-----CCeEEEEeeCCCceEEeCcHHHHHHHHHHHhhcCceEEEeeccCccccccccccHHHH
Q psy9442 1 MAAV-GLSWEEVKARAP-----ADIVAACHNNVDSVTISGPPAAIDKFVAELSAEGVFAKKVASSGFTGKLDWTGNWISY 74 (127)
Q Consensus 1 M~av-~~~~~~~~~~l~-----~~v~iA~~N~p~~~vvsG~~~~i~~~~~~l~~~g~~~~~L~v~~a~h~~~~~~~~~~~ 74 (127)
|+|| +++.+++++++. +.++|||+|+|+|+||||+.++|+++.+.|+++|+++++|+|++|||++.|++....|
T Consensus 131 M~AV~~~~~~~v~~~l~~~~~~~~v~iA~~Nsp~~~VisG~~~al~~~~~~l~~~g~~~~~L~v~~afHS~~m~~~~~~~ 210 (336)
T 3ptw_A 131 MVAVLRMTPEQVDEIIEKSSPYGIVEGANYNSPGQIVISGELVALEKAMEFIKEVGGRAIKLPVSAPFHCSMLQPAAEKL 210 (336)
T ss_dssp EEEEESCCHHHHHHHHHHHGGGSCEEEEEEEETTEEEEEEEHHHHHHHHHHHHHTTCEEEECSCSSCTTSGGGHHHHHHH
T ss_pred EEEEeCCCHHHHHHHHHhcccCCeEEEEEEecCCcEEEEcCHHHHHHHHHHHHhcCCcEEECCCCCCcccHHHHHHHHHH
Confidence 7887 899999999986 3599999999999999999999999999999999999999999999999888766666
Q ss_pred Hhhh-------hhccccccCcccc-----cCceeeeeeEECchhhHHHHhhhcCC
Q psy9442 75 IDTM-------LQFSILGINTREL-----YLPTRMQRVCIDPAKHKALVETLSGD 117 (127)
Q Consensus 75 ~d~l-------l~~~v~~~~~~~~-----~~p~~i~~~~~~pv~~~~~v~~~~~~ 117 (127)
.+.+ .+.+++|+.+... ..++||.+++++||+|.++++.+..+
T Consensus 211 ~~~l~~~~~~~p~ip~~S~vtg~~~~~~~~~~~~~~~~l~~pV~f~~~v~~l~~~ 265 (336)
T 3ptw_A 211 EDELNKISINKLNGIVMSNVKGEAYLEDDNIIELLTSQVKKPVLFINDIEKMIES 265 (336)
T ss_dssp HHHHTTSCCCCCCSEEEETTTTEECCTTSCHHHHHHHHTTSCBCHHHHHHHHHHT
T ss_pred HHHHhcCCCCCCCceEEECCCCcccCChhhHHHHHHHHhhcceeHHHHHHHHHhC
Confidence 5544 2445566644332 25789999999999999999998543
No 3
>3tzy_A Polyketide synthase PKS13; acyltransferase, long fatty acid chain transferase, acyl CAR protein, transferase; HET: PLM; 2.20A {Mycobacterium tuberculosis} PDB: 3tzw_A 3tzx_A* 3tzz_A*
Probab=99.80 E-value=3.1e-20 Score=150.15 Aligned_cols=117 Identities=18% Similarity=0.190 Sum_probs=99.3
Q ss_pred CeeecCCHHHHHhhCC--CCeEEEEeeCCCceEEeCcHHHHHHHHHHHhhcCceEEEeeccCccccccccccHHHHHhhh
Q psy9442 1 MAAVGLSWEEVKARAP--ADIVAACHNNVDSVTISGPPAAIDKFVAELSAEGVFAKKVASSGFTGKLDWTGNWISYIDTM 78 (127)
Q Consensus 1 M~av~~~~~~~~~~l~--~~v~iA~~N~p~~~vvsG~~~~i~~~~~~l~~~g~~~~~L~v~~a~h~~~~~~~~~~~~d~l 78 (127)
|++++.+.+++++++. ++++|||+|||+|+||||+.++|+++.+.|+++|+++++|+|++|||+..|++-..+|.+.+
T Consensus 274 ma~v~~~~~~v~~~~~~~~~v~iA~~NsP~~~ViSG~~~ai~~~~~~l~~~g~~~~~L~V~~AfHS~~m~~~~~~~~~~l 353 (491)
T 3tzy_A 274 MALVEYSADEIREVFSDFPDLEVCVYAAPTQTVIGGPPEQVDAILARAEAEGKFARKFATKGASHTSQMDPLLGELTAEL 353 (491)
T ss_dssp EEEESCCHHHHHHHGGGCTTCEEEEEEETTEEEEEECHHHHHHHHHHHHHHTCCEEEESCSSCTTSGGGGGGHHHHHHHT
T ss_pred hhhccchHHHHHhhhcccccceeeeecCCCcEEeCCcHHHHHHHHHHHHhcCceEEecccccCCcchhhhhhHHHHHHHH
Confidence 4568999999999886 57999999999999999999999999999999999999999999999999988777776654
Q ss_pred h-------hccccccCcc---------cccCceeeeeeEECchhhHHHHhhhcCC
Q psy9442 79 L-------QFSILGINTR---------ELYLPTRMQRVCIDPAKHKALVETLSGD 117 (127)
Q Consensus 79 l-------~~~v~~~~~~---------~~~~p~~i~~~~~~pv~~~~~v~~~~~~ 117 (127)
- ..+++++.+. ....++||.+++++||+|.++|+.|.++
T Consensus 354 ~~i~~~~p~ip~~S~vt~~~~~~~~~~~~~~~~yw~~~l~~pV~F~~av~~l~~~ 408 (491)
T 3tzy_A 354 QGIKPTSPTCGIFSTVHEGRYIKPGGEPIHDVEYWKKGLRHSVYFTHGIRNAVDS 408 (491)
T ss_dssp TTCCCCCCSSEEEETTTTTEEECTTCCCCCSHHHHHHHHHSCBCHHHHHHHHHHT
T ss_pred hcCCCCCCCccEEEeccCCcccCCCcchhcCHHHHHHHhhccccHHHHHHHHHHC
Confidence 2 3455555322 2356889999999999999999998543
No 4
>2h1y_A Malonyl coenzyme A-acyl carrier protein transacyl; FABD, MCAT, transferase; 2.50A {Helicobacter pylori}
Probab=99.80 E-value=1.1e-20 Score=145.55 Aligned_cols=117 Identities=15% Similarity=0.122 Sum_probs=99.5
Q ss_pred Cee-ecCCHHHHHhhCCC--CeEEEEeeCCCceEEeCcHHHHHHHHHHHhhcCc-eEEEeeccCccccccccccHHHHHh
Q psy9442 1 MAA-VGLSWEEVKARAPA--DIVAACHNNVDSVTISGPPAAIDKFVAELSAEGV-FAKKVASSGFTGKLDWTGNWISYID 76 (127)
Q Consensus 1 M~a-v~~~~~~~~~~l~~--~v~iA~~N~p~~~vvsG~~~~i~~~~~~l~~~g~-~~~~L~v~~a~h~~~~~~~~~~~~d 76 (127)
|+| ++++.+++++++.. +++|||+|+|+|+||||+.++|+++.+.|+++|+ ++++|+|++|||++.|++...+|.+
T Consensus 144 M~aVv~~~~~~v~~~l~~~~~v~iA~~Nsp~~~VisG~~~al~~~~~~l~~~g~~~~~~L~v~~afHS~~m~~~~~~~~~ 223 (321)
T 2h1y_A 144 MMVVLGVSEESLLSLCQRTKNVWCANFNGGMQVVLAGVKDDLKALEPTLKEMGAKRVVFLEMSVASHCPFLEPMIFKFQE 223 (321)
T ss_dssp EEEEESSCHHHHHHHHHTSTTEEEEEEEETTEEEEEEEHHHHTTSHHHHHHHTCSEEEECSSSCCCSSGGGGGGHHHHHH
T ss_pred EEEEecCCHHHHHHHHhhcCCeEEEEEecCCcEEEEeCHHHHHHHHHHHHhcCCceEEECCCCCccccHHHHHHHHHHHH
Confidence 788 79999999999862 5999999999999999999999999999999999 8999999999999998877666665
Q ss_pred hh-------hhccccccCcccc-----cCceeeeeeEECchhhHHHHhhhcCC
Q psy9442 77 TM-------LQFSILGINTREL-----YLPTRMQRVCIDPAKHKALVETLSGD 117 (127)
Q Consensus 77 ~l-------l~~~v~~~~~~~~-----~~p~~i~~~~~~pv~~~~~v~~~~~~ 117 (127)
.+ ...+++++.+... ..++||.+++++||+|.++++.+..+
T Consensus 224 ~l~~~~~~~p~ip~~S~vtg~~~~~~~~~~~~~~~~l~~pV~f~~ai~~l~~~ 276 (321)
T 2h1y_A 224 LLEKSLKDKFHFEIISNATNEAYHNKAKAVELLSLQLTQPVRYQDCVKSNNDR 276 (321)
T ss_dssp HHHHHCCSCCSSEEECTTTSCEECSHHHHHHHHHHHTTSCBCHHHHHHTTGGG
T ss_pred HHhcCCCCCCCceEEECCCCCccCChhhHHHHHHHHHhccCcHHHHHHHHHhc
Confidence 44 2455666654432 24689999999999999999999654
No 5
>2qc3_A MCT, malonyl COA-acyl carrier protein transacylase; malonyl-COA:ACP transacylase, , nucleophili fatty acids biosynthesis; 2.30A {Mycobacterium tuberculosis} PDB: 2qj3_A
Probab=99.80 E-value=2.2e-20 Score=142.69 Aligned_cols=116 Identities=17% Similarity=0.166 Sum_probs=98.9
Q ss_pred Ceee-cCCHHHHHhhCC-CCeEEEEeeCCCceEEeCcHHHHHHHHHHHhhcCceEEEeeccCccccccccccHHHHHhhh
Q psy9442 1 MAAV-GLSWEEVKARAP-ADIVAACHNNVDSVTISGPPAAIDKFVAELSAEGVFAKKVASSGFTGKLDWTGNWISYIDTM 78 (127)
Q Consensus 1 M~av-~~~~~~~~~~l~-~~v~iA~~N~p~~~vvsG~~~~i~~~~~~l~~~g~~~~~L~v~~a~h~~~~~~~~~~~~d~l 78 (127)
|+|| +++.+++++++. ++++|||+|+|+|+||||+.++++++.+.|+++| ++++|+|++|||++.|++....|.+.+
T Consensus 132 M~aV~~~~~~~v~~~l~~~~v~iA~~Nsp~~~visG~~~~l~~~~~~l~~~g-~~~~L~v~~afHS~~m~~~~~~~~~~l 210 (303)
T 2qc3_A 132 MSAVLGGDETEVLSRLEQLDLVPANRNAAGQIVAAGRLTALEKLAEDPPAKA-RVRALGVAGAFHTEFMAPALDGFAAAA 210 (303)
T ss_dssp EEEEESSCHHHHHHHHHHTTCEEEEEEETTEEEEEEEHHHHHHHHHSCCTTC-EEEECSCSSCTTSGGGGGGHHHHHHHH
T ss_pred EEEEeCCCHHHHHHHhccCCEEEEEEecCCcEEEEcCHHHHHHHHHHHHhCC-CEEECCCCCCcchHHHHHHHHHHHHHH
Confidence 7888 899999999987 6799999999999999999999999999999999 999999999999998887766666544
Q ss_pred -------hhccccccCcccc-----cCceeeeeeEECchhhHHHHhhhcCC
Q psy9442 79 -------LQFSILGINTREL-----YLPTRMQRVCIDPAKHKALVETLSGD 117 (127)
Q Consensus 79 -------l~~~v~~~~~~~~-----~~p~~i~~~~~~pv~~~~~v~~~~~~ 117 (127)
.+.+++++.+... ..+.||.+++++||+|.++++.+.++
T Consensus 211 ~~~~~~~p~ip~~S~vtg~~~~~~~~~~~~~~~~l~~pV~f~~~i~~l~~~ 261 (303)
T 2qc3_A 211 ANIATADPTATLLSNRDGKPVTSAAAAMDTLVSQLTQPVRWDLCTATLREH 261 (303)
T ss_dssp HTSCCCCCSSEEBCTTTSCBCCSHHHHHHHHHHGGGSCEEHHHHHHHHHHT
T ss_pred HhCCCCCCCeEEEECCCCCccCCchHHHHHHHHHHhccEeHHHHHHHHHHC
Confidence 2455666654432 23679999999999999999999543
No 6
>3ezo_A Malonyl COA-acyl carrier protein transacylase; ssgcid, acyl-carrier-protein S-malonyltransferase, acyltransferase, transferase; 2.05A {Burkholderia pseudomallei 1710B}
Probab=99.80 E-value=2.5e-20 Score=143.24 Aligned_cols=117 Identities=19% Similarity=0.171 Sum_probs=98.5
Q ss_pred Ceee-cCCHHHHHhhCC-----CCeEEEEeeCCCceEEeCcHHHHHHHHHHHhhcCc-eEEEeeccCccccccccccHHH
Q psy9442 1 MAAV-GLSWEEVKARAP-----ADIVAACHNNVDSVTISGPPAAIDKFVAELSAEGV-FAKKVASSGFTGKLDWTGNWIS 73 (127)
Q Consensus 1 M~av-~~~~~~~~~~l~-----~~v~iA~~N~p~~~vvsG~~~~i~~~~~~l~~~g~-~~~~L~v~~a~h~~~~~~~~~~ 73 (127)
|+|| +++.+++++++. +.++|||+|+|+|+||||+.++++++.+.|+++|+ ++++|+|++|||++.|++...+
T Consensus 138 M~aV~~~~~~~v~~~l~~~~~~~~v~iA~~Nsp~~~VisG~~~~l~~~~~~l~~~g~~~~~~L~v~~afHS~~m~~~~~~ 217 (318)
T 3ezo_A 138 MAAILGLDDDTVRAVCAEASATGVVEAVNFNAPAQVVIAGTKAGIEKACEIAKEKGAKRALPLPVSAPFHSSLLKPASDK 217 (318)
T ss_dssp EEEEESCCHHHHHHHHHHHGGGSCEEEEEEEETTEEEEEEEHHHHHHHHHHHHHTTCSEEEECSCSSCTTSGGGHHHHHH
T ss_pred EEEEeCCCHHHHHHHHHhcCCCCeEEEEEEcCCCCEEEeCCHHHHHHHHHHHHhCCCceEEECCCCCCcChHHHHHHHHH
Confidence 7888 999999999985 36999999999999999999999999999999999 9999999999999888876666
Q ss_pred HHhhh-------hhccccccCcccc-----cCceeeeeeEECchhhHHHHhhhcCC
Q psy9442 74 YIDTM-------LQFSILGINTREL-----YLPTRMQRVCIDPAKHKALVETLSGD 117 (127)
Q Consensus 74 ~~d~l-------l~~~v~~~~~~~~-----~~p~~i~~~~~~pv~~~~~v~~~~~~ 117 (127)
|.+.+ .+.+++++.+... ..+.||.+++++||+|.++++.+..+
T Consensus 218 ~~~~l~~~~~~~p~ipv~S~vtg~~~~~~~~~~~~~~~~l~~pV~f~~~v~~l~~~ 273 (318)
T 3ezo_A 218 LREYLAGVDVKAPKISVVNNIDVAVVSDPAAIKDALVRQAAGPVRWVECVQHIARE 273 (318)
T ss_dssp HHHHHTTSCCCCCSSEEBCTTTCCBCCCHHHHHHHHHHHTTSCBCHHHHHHHHHHT
T ss_pred HHHHHhcCCCCCCCCeEEECCCCcccCChhHHHHHHHHHhcccEEHHHHHHHHHhC
Confidence 65544 2445666654332 23579999999999999999999643
No 7
>1nm2_A Malonyl COA:acyl carrier protein malonyltransfera; alpha/beta hydrolase-like core; 2.00A {Streptomyces coelicolor} SCOP: c.19.1.1 d.58.23.1 PDB: 2cdh_4 2cf2_B
Probab=99.80 E-value=1.1e-20 Score=145.15 Aligned_cols=116 Identities=11% Similarity=0.070 Sum_probs=98.8
Q ss_pred Ceee-cCCHHHHHhhCC-CCeEEEEeeCCCceEEeCcHHHHHHHHHHHhhcCceEEEeeccCccccccccccHHHHHhhh
Q psy9442 1 MAAV-GLSWEEVKARAP-ADIVAACHNNVDSVTISGPPAAIDKFVAELSAEGVFAKKVASSGFTGKLDWTGNWISYIDTM 78 (127)
Q Consensus 1 M~av-~~~~~~~~~~l~-~~v~iA~~N~p~~~vvsG~~~~i~~~~~~l~~~g~~~~~L~v~~a~h~~~~~~~~~~~~d~l 78 (127)
|+|| +++.+++++++. ++++|||+|+|+|+||||+.++++++.+.|+++|+++++|+|++|||++.|++....|.+.+
T Consensus 138 M~aV~g~~~~~v~~~~~~~~v~iA~~Nsp~~~VisG~~~~l~~~~~~l~~~g~~~~~L~v~~afHS~~m~~~~~~~~~~l 217 (317)
T 1nm2_A 138 MSALLGGDPEVSVAHLERLGLTPANVNGAGQIVAAGTMEQLAALNEDKPEGVRKVVPLKVAGAFHTRHMAPAVDKLAEAA 217 (317)
T ss_dssp EEEEEESCHHHHHHHHHHTTCEEEEEEETTEEEEEEEHHHHHHHHHSCCTTEEEEEECSCSSCTTSGGGHHHHHHHHHHH
T ss_pred EEEEeCCCHHHHHHHhccCCEEEEEEecCCcEEEEcCHHHHHHHHHHHHHCCCeEEECCCCCCcChHHHHHHHHHHHHHH
Confidence 7888 899999999987 67999999999999999999999999999999999999999999999998887666665543
Q ss_pred -------hhccccccCccccc-----CceeeeeeEECchhhHHHHhhhcC
Q psy9442 79 -------LQFSILGINTRELY-----LPTRMQRVCIDPAKHKALVETLSG 116 (127)
Q Consensus 79 -------l~~~v~~~~~~~~~-----~p~~i~~~~~~pv~~~~~v~~~~~ 116 (127)
.+.+++++.+...+ .+.||.+++++||+|.++++.+.+
T Consensus 218 ~~~~~~~p~ipv~S~vtg~~~~~~~~~~~~~~~~l~~pV~f~~~v~~l~~ 267 (317)
T 1nm2_A 218 KALTPADPKVTYVSNKDGRAVASGTEVLDRLVGQVANPVRWDLCMETFKE 267 (317)
T ss_dssp TTCCCCCCSSEEBCTTTSCBCCCHHHHHHHHHHHTTSCEEHHHHHHHHHH
T ss_pred HhCCCCCCCceEEECCCCccccCchhHHHHHHHHhhCcEeHHHHHHHHHh
Confidence 34556666544322 367999999999999999999853
No 8
>2cuy_A Malonyl COA-[acyl carrier protein] transacylase; transferase, structural genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=99.80 E-value=4.8e-20 Score=140.98 Aligned_cols=116 Identities=15% Similarity=0.139 Sum_probs=97.5
Q ss_pred Cee-ecCCHHHHHhhCCC--CeEEEEeeCCCceEEeCcHHHHHHHHHHHhhcCceEEEeeccCccccccccccHHHHHhh
Q psy9442 1 MAA-VGLSWEEVKARAPA--DIVAACHNNVDSVTISGPPAAIDKFVAELSAEGVFAKKVASSGFTGKLDWTGNWISYIDT 77 (127)
Q Consensus 1 M~a-v~~~~~~~~~~l~~--~v~iA~~N~p~~~vvsG~~~~i~~~~~~l~~~g~~~~~L~v~~a~h~~~~~~~~~~~~d~ 77 (127)
|+| ++++.+++++++.. +++|||+|+|+|+||||+.++++++.+.|+++|+++++|+|++|||++.|++....|.+.
T Consensus 129 M~aV~~~~~~~v~~~l~~~~~v~iA~~Nsp~~~visG~~~~l~~~~~~l~~~g~~~~~L~v~~afHS~~m~~~~~~~~~~ 208 (305)
T 2cuy_A 129 MAAVLKLPLEEIQKALEGLEGVEIANLNAPEQTVISGRRQAVEEAAERLKERRARVVFLPVSAPFHSSLMAPARKRLAED 208 (305)
T ss_dssp EEEEESSCHHHHHHHHTTCSSEEEEEEEETTEEEEEEEHHHHHHHHHHHHHTTCEEEECSCSSCCSSGGGHHHHHHHHHH
T ss_pred EEEEeCCCHHHHHHHHhhcCCeEEEEEecCCcEEEEcCHHHHHHHHHHHHhCCceEEECCCCCCCChHHHHHHHHHHHHH
Confidence 788 49999999999973 599999999999999999999999999999999999999999999999888766666554
Q ss_pred h-------hhccccccCcccc-----cCceeeeeeEECchhhHHHHhhhcC
Q psy9442 78 M-------LQFSILGINTREL-----YLPTRMQRVCIDPAKHKALVETLSG 116 (127)
Q Consensus 78 l-------l~~~v~~~~~~~~-----~~p~~i~~~~~~pv~~~~~v~~~~~ 116 (127)
+ ...+++++.+... ..+.||.+++++||+|.++++.+..
T Consensus 209 l~~~~~~~p~ip~~S~vtg~~~~~~~~~~~~~~~~l~~pV~f~~~v~~l~~ 259 (305)
T 2cuy_A 209 LAQVPLRRPRFPVYSNVTARPEEDPERIRALLLEQITAPVRWVEILRDMEA 259 (305)
T ss_dssp HTTCCCCCCSSCEECTTTSSEECCHHHHHHHHHHGGGSCBCHHHHHHHHHH
T ss_pred HhcCCCCCCCeeEEECCCCCccCChhHHHHHHHHHHhhhCcHHHHHHHHHh
Confidence 3 2445566644432 2367999999999999999999853
No 9
>3sbm_A DISD protein, DSZD; transferase; HET: P6G; 1.35A {Sorangium cellulosum} PDB: 3rgi_A
Probab=99.80 E-value=3.5e-20 Score=140.00 Aligned_cols=117 Identities=18% Similarity=0.157 Sum_probs=97.4
Q ss_pred Ceee-cCCHHHHHhhCC----CCeEEEEeeCCCceEEeCcHHHHHHHHHHHhh-cCceEEEeeccCccccccccccHHHH
Q psy9442 1 MAAV-GLSWEEVKARAP----ADIVAACHNNVDSVTISGPPAAIDKFVAELSA-EGVFAKKVASSGFTGKLDWTGNWISY 74 (127)
Q Consensus 1 M~av-~~~~~~~~~~l~----~~v~iA~~N~p~~~vvsG~~~~i~~~~~~l~~-~g~~~~~L~v~~a~h~~~~~~~~~~~ 74 (127)
|+|| +++.+++++++. ++++|||+|+|+|+||||+.++++++.+.|++ .++++++|+|++|||++.|++...+|
T Consensus 123 M~av~~~~~~~v~~~l~~~~~~~v~iA~~Nsp~~~visG~~~al~~~~~~l~~~~~~~~~~L~v~~afHS~~m~~~~~~~ 202 (281)
T 3sbm_A 123 MAAVIGLDEERVRELLDQNGATAVDIANLNSPSQVVISGAKDEIARLQVPFEAAGAKKYTVLRVSAAFHSRFMRPAMVEF 202 (281)
T ss_dssp EEEEESCCHHHHHHHHHHTTCTTEEEEEEEETTEEEEEECHHHHHHTHHHHHHHTCSEEEECCCSBCTTSGGGHHHHHHH
T ss_pred eEEEeCCCHHHHHHHHHHcCCCCEEEEEEcCccCEEEeCCHHHHHHHHHHHHhcCCceEEECCCCCCcchHHHHHHHHHH
Confidence 7786 999999999985 46999999999999999999999999999999 67899999999999998888766666
Q ss_pred Hhhh-------hhccccccCccccc----CceeeeeeEECchhhHHHHhhhcCC
Q psy9442 75 IDTM-------LQFSILGINTRELY----LPTRMQRVCIDPAKHKALVETLSGD 117 (127)
Q Consensus 75 ~d~l-------l~~~v~~~~~~~~~----~p~~i~~~~~~pv~~~~~v~~~~~~ 117 (127)
.+.+ .+.+++|+.+...+ .++||.+++++||+|.++++.+.++
T Consensus 203 ~~~l~~~~~~~p~ip~~S~vtg~~~~~~~~~~~~~~~l~~pV~f~~~i~~l~~~ 256 (281)
T 3sbm_A 203 GRFLEGYDFAPPKIPVISNVTARPCKADGIRAALSEQIASPVRWCESIRYLMGR 256 (281)
T ss_dssp HHHHTTCCCCCCSSCEECTTTSSBCCGGGHHHHHHHGGGSCEEHHHHHHHHHHT
T ss_pred HHHHhcCCCCCCCCeEEECCCCCCCChHHHHHHHHHHccccEeHHHHHHHHHhC
Confidence 5543 34566666544433 2468899999999999999998543
No 10
>3im8_A Malonyl acyl carrier protein transacylase; fatty acid synthesis, malonyl-COA, acyl carrier protein TRAN (MCAT), FABD, acyltransferase; 2.10A {Streptococcus pneumoniae}
Probab=99.80 E-value=4e-20 Score=141.49 Aligned_cols=117 Identities=16% Similarity=0.184 Sum_probs=98.0
Q ss_pred Ceee-cCCHHHHHhhCC-----CCeEEEEeeCCCceEEeCcHHHHHHHHHHHhhcCc-eEEEeeccCccccccccccHHH
Q psy9442 1 MAAV-GLSWEEVKARAP-----ADIVAACHNNVDSVTISGPPAAIDKFVAELSAEGV-FAKKVASSGFTGKLDWTGNWIS 73 (127)
Q Consensus 1 M~av-~~~~~~~~~~l~-----~~v~iA~~N~p~~~vvsG~~~~i~~~~~~l~~~g~-~~~~L~v~~a~h~~~~~~~~~~ 73 (127)
|+|| +++.+++++++. +.++|||+|+|+|+||||+.++++++.+.|+++|+ ++++|+|++|||++.|++....
T Consensus 130 M~aV~~~~~~~~~~~~~~~~~~~~v~iA~~Nsp~~~VisG~~~~l~~~~~~l~~~g~~~~~~L~v~~afHS~~m~~~~~~ 209 (307)
T 3im8_A 130 MVAVLNTPVEVIEEACQKASELGVVTPANYNTPAQIVIAGEVVAVDRAVELLQEAGAKRLIPLKVSGPFHTSLLEPASQK 209 (307)
T ss_dssp EEEEESSCHHHHHHHHHHHGGGSCEEEEEEEETTEEEEEECHHHHHHHHHHHHHHTCCEEEECCSSSCCSSGGGHHHHHH
T ss_pred EEEEeCCCHHHHHHHHHhcCcCCeEEEEEEcCCCcEEEEcCHHHHHHHHHHHHhCCCceEEECCCCCCCChHHHHHHHHH
Confidence 7888 899999999886 34999999999999999999999999999999999 8999999999999988876666
Q ss_pred HHhhh-------hhccccccCcccc----cCceeeeeeEECchhhHHHHhhhcCC
Q psy9442 74 YIDTM-------LQFSILGINTREL----YLPTRMQRVCIDPAKHKALVETLSGD 117 (127)
Q Consensus 74 ~~d~l-------l~~~v~~~~~~~~----~~p~~i~~~~~~pv~~~~~v~~~~~~ 117 (127)
|.+.+ .+.+++++.+... ..+.||.+++++||+|.++++.+..+
T Consensus 210 ~~~~l~~~~~~~p~ip~~S~~tg~~~~~~~~~~~~~~~l~~pV~f~~~v~~l~~~ 264 (307)
T 3im8_A 210 LAETLAQVSFSDFTCPLVGNTEAAVMQKEDIAQLLTRQVKEPVRFYESIGVMQEA 264 (307)
T ss_dssp HHHHHHTCCCCCCSSCBBCTTTSSBCCGGGHHHHHHHHTTSCEEHHHHHHHHHHT
T ss_pred HHHHHhcCCCCCCceEEEEcCCCccCChhHHHHHHHHHhhhheeHHHHHHHHHhC
Confidence 66544 2445666644332 23679999999999999999999543
No 11
>3tqe_A Malonyl-COA-[acyl-carrier-protein] transacylase; fatty acid/phospholipid metabolism, transferase; HET: MSE; 1.50A {Coxiella burnetii}
Probab=99.79 E-value=4.9e-20 Score=141.42 Aligned_cols=117 Identities=16% Similarity=0.162 Sum_probs=97.7
Q ss_pred Ceee-cCCHHHHHhhCC-----CCeEEEEeeCCCceEEeCcHHHHHHHHHHHhhcCce-EEEeeccCccccccccccHHH
Q psy9442 1 MAAV-GLSWEEVKARAP-----ADIVAACHNNVDSVTISGPPAAIDKFVAELSAEGVF-AKKVASSGFTGKLDWTGNWIS 73 (127)
Q Consensus 1 M~av-~~~~~~~~~~l~-----~~v~iA~~N~p~~~vvsG~~~~i~~~~~~l~~~g~~-~~~L~v~~a~h~~~~~~~~~~ 73 (127)
|+|| +++.+++++++. +.++|||+|+|+|+||||+.++++++.+.|+++|++ +++|+|++|||++.|++...+
T Consensus 136 M~av~~~~~~~~~~~~~~~~~~~~v~iA~~Nsp~~~VisG~~~~l~~~~~~l~~~g~~~~~~L~v~~afHS~~m~~~~~~ 215 (316)
T 3tqe_A 136 MGAIIGLNEAEIESICENAALGQVVQPANLNSTDQTVISGHSEAVDRALNMAKTEGAKIAKRIPVSVPSHCPLMQPAADR 215 (316)
T ss_dssp EEEEESSCHHHHHHHHHHHHTTSCEEEEEEEETTEEEEEEEHHHHHHHHHHHHHTTCSEEEECSCSCCCSSGGGHHHHHH
T ss_pred EEEecCCCHHHHHHHHHhcCCCCeEEEEEEcCCCcEEEEecHHHHHHHHHHHHhcCCceEEEccCCCCCChHHHHHHHHH
Confidence 7887 999999999986 359999999999999999999999999999999995 999999999999988876666
Q ss_pred HHhhhh-------hccccccCcccc-----cCceeeeeeEECchhhHHHHhhhcCC
Q psy9442 74 YIDTML-------QFSILGINTREL-----YLPTRMQRVCIDPAKHKALVETLSGD 117 (127)
Q Consensus 74 ~~d~ll-------~~~v~~~~~~~~-----~~p~~i~~~~~~pv~~~~~v~~~~~~ 117 (127)
|.+.+. +.+++++.+... ..+.||.+++++||+|.++++.+..+
T Consensus 216 ~~~~l~~~~~~~p~ip~~S~vtg~~~~~~~~~~~~~~~~l~~pV~f~~~i~~l~~~ 271 (316)
T 3tqe_A 216 LAQDIAKISIDSPKVPVIHNVDVVDHNEANIIRGALIKQLVRPVRWVETIKYIEEQ 271 (316)
T ss_dssp HHHHHTTSCCCCCSSCBCCTTTSSCCCSHHHHHHHHHHHTTSCEEHHHHHHHHHHT
T ss_pred HHHHHhcCCCCCCCceEEECCCCCcCCChhHHHHHHHHHHhcceeHHHHHHHHHHC
Confidence 665442 445666644332 24679999999999999999999543
No 12
>3qat_A Malonyl COA-acyl carrier protein transacylase; seattle structural genomics center for infectious disease, S bartonella, CAT-scratch disease; 1.60A {Bartonella henselae}
Probab=99.79 E-value=5.7e-20 Score=141.13 Aligned_cols=117 Identities=17% Similarity=0.126 Sum_probs=97.5
Q ss_pred Ceee-cCCHHHHHhhCC-----CCeEEEEeeCCCceEEeCcHHHHHHHHHHHhhcCc-eEEEeeccCccccccccccHHH
Q psy9442 1 MAAV-GLSWEEVKARAP-----ADIVAACHNNVDSVTISGPPAAIDKFVAELSAEGV-FAKKVASSGFTGKLDWTGNWIS 73 (127)
Q Consensus 1 M~av-~~~~~~~~~~l~-----~~v~iA~~N~p~~~vvsG~~~~i~~~~~~l~~~g~-~~~~L~v~~a~h~~~~~~~~~~ 73 (127)
|+|| +++.+++++++. +.++|||+|+|+|+||||+.++++++.+.|+++|+ ++++|+|++|||++.|++...+
T Consensus 138 M~av~~~~~~~~~~~~~~~~~~~~v~iA~~Nsp~~~visG~~~~l~~~~~~l~~~g~~~~~~L~v~~afHS~~m~~~~~~ 217 (318)
T 3qat_A 138 MAALIGLDEKDVEEICEIVAEEGLCQIANDNGGGQIVISGEAKAVETAVEVASQKGAKRAVLLPVSAPFHSALMQPAANA 217 (318)
T ss_dssp EEEEESCCHHHHHHHHHHTTTTCCEEEEEEEETTEEEEEEEHHHHHHHHHHHHHTTCSEEEEETTSCCTTSGGGHHHHHH
T ss_pred EEEEeCCCHHHHHHHHHhcCcCCcEEEEEECCCCCEEEeCCHHHHHHHHHHHHhcCCceEEECCCCCCCCCHHHHHHHHH
Confidence 7885 999999999885 24999999999999999999999999999999999 6999999999999888876666
Q ss_pred HHhhhh-------hccccccCcccc-----cCceeeeeeEECchhhHHHHhhhcCC
Q psy9442 74 YIDTML-------QFSILGINTREL-----YLPTRMQRVCIDPAKHKALVETLSGD 117 (127)
Q Consensus 74 ~~d~ll-------~~~v~~~~~~~~-----~~p~~i~~~~~~pv~~~~~v~~~~~~ 117 (127)
|.+.+- ..+++++.+... ..++||.+++++||+|.++++.+..+
T Consensus 218 ~~~~l~~~~~~~p~ip~~S~vtg~~~~~~~~~~~~~~~~l~~pV~f~~~v~~l~~~ 273 (318)
T 3qat_A 218 MKNALLTVNKTAPIVPLIANVSVIPESDPERIVSLLVQQVTGRVRWRETIEWISAN 273 (318)
T ss_dssp HHHHHHHSCCCCCSSCEECTTTCSEECCHHHHHHHHHHHHHSCEEHHHHHHHHHHT
T ss_pred HHHHHhcCCCCCCCceEEECCCCCcCCChHHHHHHHHHHhhccEeHHHHHHHHHhC
Confidence 655442 445666644332 23579999999999999999999644
No 13
>3im9_A MCAT, MCT, malonyl COA-acyl carrier protein transacylase; fatty acid synthesis, malonyl-COA: acyl carrier protein TRAN (MCAT), FABD; 1.46A {Staphylococcus aureus}
Probab=99.78 E-value=1e-19 Score=139.61 Aligned_cols=117 Identities=21% Similarity=0.185 Sum_probs=98.7
Q ss_pred Ceee-cCCHHHHHhhCC--C----CeEEEEeeCCCceEEeCcHHHHHHHHHHHhhcCc-eEEEeeccCccccccccccHH
Q psy9442 1 MAAV-GLSWEEVKARAP--A----DIVAACHNNVDSVTISGPPAAIDKFVAELSAEGV-FAKKVASSGFTGKLDWTGNWI 72 (127)
Q Consensus 1 M~av-~~~~~~~~~~l~--~----~v~iA~~N~p~~~vvsG~~~~i~~~~~~l~~~g~-~~~~L~v~~a~h~~~~~~~~~ 72 (127)
|+|| +++.+++++++. . .++|||+|+|+|+||||+.++++++.+.|+++|+ ++++|+|++|||++.|++...
T Consensus 137 M~av~~~~~~~v~~~~~~~~~~~~~v~iA~~Nsp~~~visG~~~~l~~~~~~l~~~g~~~~~~L~v~~afHS~~m~~~~~ 216 (316)
T 3im9_A 137 MAAVLGLDFDKVDEICKSLSSDDKIIEPANINCPGQIVVSGHKALIDELVEKGKSLGAKRVMPLAVSGPFHSSLMKVIEE 216 (316)
T ss_dssp EEEEESCCHHHHHHHHHHHCBTTBCEEEEEEEETTEEEEEEEHHHHHHHHHHTTTTTCSEEEECCCSSCTTSGGGGGGHH
T ss_pred EEEEeCCCHHHHHHHHHHhcccCCeEEEEEEcCCCCEEEEcCHHHHHHHHHHHHhCCCceEEECCCCCCcchHHHHHHHH
Confidence 7887 899999999985 1 4999999999999999999999999999999999 999999999999999887766
Q ss_pred HHHhhh-------hhccccccCcccc-----cCceeeeeeEECchhhHHHHhhhcCC
Q psy9442 73 SYIDTM-------LQFSILGINTREL-----YLPTRMQRVCIDPAKHKALVETLSGD 117 (127)
Q Consensus 73 ~~~d~l-------l~~~v~~~~~~~~-----~~p~~i~~~~~~pv~~~~~v~~~~~~ 117 (127)
+|.+.+ .+.+++++.+... ..+.||.+++++||+|.++++.+..+
T Consensus 217 ~~~~~l~~~~~~~p~ip~~S~vtg~~~~~~~~~~~~~~~~l~~pV~f~~~v~~l~~~ 273 (316)
T 3im9_A 217 DFSSYINQFEWRDAKFPVVQNVNAQGETDKEVIKSNMVKQLYSPVQFINSTEWLIDQ 273 (316)
T ss_dssp HHHHHHTTSCCCCCSSCEECTTTCSEECCHHHHHHHHHHHTTSCEEHHHHHHHHHHT
T ss_pred HHHHHHhhCCCCCCCceEEEcCCCcccCChhHHHHHHHHHhhccEeHHHHHHHHHhc
Confidence 666554 2445666644332 23678999999999999999999644
No 14
>1mla_A Malonyl-coenzyme A acyl carrier protein transacylase; acyltransferase; 1.50A {Escherichia coli} SCOP: c.19.1.1 d.58.23.1 PDB: 2g2o_A 2g1h_A 2g2y_A 2g2z_A* 3h0p_A 3hjv_A*
Probab=99.78 E-value=1.1e-19 Score=139.15 Aligned_cols=116 Identities=16% Similarity=0.111 Sum_probs=96.8
Q ss_pred Cee-ecCCHHHHHhhCC-----CCeEEEEeeCCCceEEeCcHHHHHHHHHHHhhcCc-eEEEeeccCccccccccccHHH
Q psy9442 1 MAA-VGLSWEEVKARAP-----ADIVAACHNNVDSVTISGPPAAIDKFVAELSAEGV-FAKKVASSGFTGKLDWTGNWIS 73 (127)
Q Consensus 1 M~a-v~~~~~~~~~~l~-----~~v~iA~~N~p~~~vvsG~~~~i~~~~~~l~~~g~-~~~~L~v~~a~h~~~~~~~~~~ 73 (127)
|+| ++++.+++++++. +.++|||+|+|+|+||||+.++++++.+.|+++|+ ++++|+|++|||++.|++....
T Consensus 132 M~aV~~~~~~~v~~~l~~~~~~~~v~iA~~Nsp~~~visG~~~~l~~~~~~l~~~g~~~~~~L~v~~afHS~~m~~~~~~ 211 (309)
T 1mla_A 132 MAAIIGLDDASIAKACEEAAEGQVVSPVNFNSPGQVVIAGHKEAVERAGAACKAAGAKRALPLPVSVPSHCALMKPAADK 211 (309)
T ss_dssp EEEEESCCHHHHHHHHHHHCTTSCEEEEEEEETTEEEEEEEHHHHHHHHHHHHHTTCSEEEECSCCSCTTSGGGHHHHHH
T ss_pred EEEEcCCCHHHHHHHHHhcCCCCeEEEEEEcCCCcEEEEccHHHHHHHHHHHHhcCCceEEECCCCCCcCcHHHHHHHHH
Confidence 788 5899999999885 24999999999999999999999999999999999 8999999999999988876666
Q ss_pred HHhhh-------hhccccccCccccc-----CceeeeeeEECchhhHHHHhhhcC
Q psy9442 74 YIDTM-------LQFSILGINTRELY-----LPTRMQRVCIDPAKHKALVETLSG 116 (127)
Q Consensus 74 ~~d~l-------l~~~v~~~~~~~~~-----~p~~i~~~~~~pv~~~~~v~~~~~ 116 (127)
|.+.+ ...+++++.+...+ .+.||.+++++||+|.++++.+..
T Consensus 212 ~~~~l~~~~~~~p~ip~~S~vtg~~~~~~~~~~~~~~~~l~~pV~f~~~v~~l~~ 266 (309)
T 1mla_A 212 LAVELAKITFNAPTVPVVNNVDVKCETNGDAIRDALVRQLYNPVQWTKSVEYMAA 266 (309)
T ss_dssp HHHHHHTSCCCCCSSCBBCTTTCCBCCSHHHHHHHHHHHHHSCEEHHHHHHHHHH
T ss_pred HHHHHhcCCCCCCCceEEECCCCCcccChHHHHHHHHHHHhccEeHHHHHHHHHh
Confidence 55443 24456666444322 367999999999999999999853
No 15
>3k89_A Malonyl COA-ACP transacylase; bacterial blight, XOO0880, FABD, xanthomonas oryzae PV. ORYZ KACC10331, transferase; 1.60A {Xanthomonas oryzae PV} PDB: 3een_A 3r97_A*
Probab=99.78 E-value=1e-19 Score=139.58 Aligned_cols=117 Identities=23% Similarity=0.189 Sum_probs=97.9
Q ss_pred Ceee-cCCHHHHHhhCC-----CCeEEEEeeCCCceEEeCcHHHHHHHHHHHhhcCce-EEEeeccCccccccccccHHH
Q psy9442 1 MAAV-GLSWEEVKARAP-----ADIVAACHNNVDSVTISGPPAAIDKFVAELSAEGVF-AKKVASSGFTGKLDWTGNWIS 73 (127)
Q Consensus 1 M~av-~~~~~~~~~~l~-----~~v~iA~~N~p~~~vvsG~~~~i~~~~~~l~~~g~~-~~~L~v~~a~h~~~~~~~~~~ 73 (127)
|+|| +++.+++++++. +.++|||+|+|+|+||||+.++++++.+.|+++|++ +++|+|++|||++.|++....
T Consensus 134 M~av~~~~~~~~~~~~~~~~~~~~v~iA~~Nsp~~~visG~~~~l~~~~~~l~~~g~~~~~~L~v~~afHS~~m~~~~~~ 213 (314)
T 3k89_A 134 MAAVLGAEDAVVLEVCAEAAGSQVVVPANFNSPGQIVIGGDAAAVDRALALLAERGVRKAVKLAVSVPSHTPLMRDAANQ 213 (314)
T ss_dssp EEEEESCCHHHHHHHHHHHCTTSCEEEEEEEETTEEEEEEEHHHHHHHHHHHHHTTCCCEEECSCCCCTTSGGGHHHHHH
T ss_pred EEEEcCCCHHHHHHHHHhcCCCCeEEEEEECCCCCEEEecCHHHHHHHHHHHHhcCCCeEEECCCCCCCChHHHHHHHHH
Confidence 7887 999999999885 259999999999999999999999999999999996 999999999999888866555
Q ss_pred HHhhh-------hhccccccCcccc-----cCceeeeeeEECchhhHHHHhhhcCC
Q psy9442 74 YIDTM-------LQFSILGINTREL-----YLPTRMQRVCIDPAKHKALVETLSGD 117 (127)
Q Consensus 74 ~~d~l-------l~~~v~~~~~~~~-----~~p~~i~~~~~~pv~~~~~v~~~~~~ 117 (127)
|.+.+ .+.+++++.+... ..++||.+++++||+|.++++.+..+
T Consensus 214 ~~~~l~~~~~~~p~ip~~S~vtg~~~~~~~~~~~~~~~~l~~pV~f~~~i~~l~~~ 269 (314)
T 3k89_A 214 LGEAMAGLSWHAPQIPVVQNVDARVHDGSAAIRQALVEQLYLPVQWTGCVQALASQ 269 (314)
T ss_dssp HHHHHHTSCCCCCSSCBEETTTTEECCSHHHHHHHHHHHHHSCEEHHHHHHHHHHT
T ss_pred HHHHHhcCCCCCCCceEEECCCCCccCChHHHHHHHHHHhhccEeHHHHHHHHHhC
Confidence 55443 3456667654432 23689999999999999999999643
No 16
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A
Probab=99.78 E-value=2.4e-19 Score=154.28 Aligned_cols=118 Identities=32% Similarity=0.435 Sum_probs=99.8
Q ss_pred CeeecCCHHHHHhhCCCCeEEEEeeCCCceEEeCcHHHHHHHHHHHhhcCceEEEeecc-CccccccccccHHHHHhhhh
Q psy9442 1 MAAVGLSWEEVKARAPADIVAACHNNVDSVTISGPPAAIDKFVAELSAEGVFAKKVASS-GFTGKLDWTGNWISYIDTML 79 (127)
Q Consensus 1 M~av~~~~~~~~~~l~~~v~iA~~N~p~~~vvsG~~~~i~~~~~~l~~~g~~~~~L~v~-~a~h~~~~~~~~~~~~d~ll 79 (127)
|+||+++.+++++++.+.++|||+|||+|+||||+.++|+++.+.|+++|+++++|+|+ +|||+++|++...+|.+.+-
T Consensus 622 M~AV~~~~~~v~~~l~~~v~iA~~NsP~~~ViSG~~~al~~l~~~l~~~g~~~~~L~v~~~AfHS~~m~~~~~~~~~~l~ 701 (965)
T 3hhd_A 622 MAAVGLSWEECKQRCPPGVVPACHNSKDTVTISGPQAPVFEFVEQLRKEGVFAKEVRTGGMAFHSYFMEAIAPPLLQELK 701 (965)
T ss_dssp EEEESSCHHHHHHHCCTTCEEEEEEETTEEEEEEEHHHHHHHHHHHHHTTCCEEEECCSSCCCSSGGGGGGHHHHHHHHH
T ss_pred EEEecCCHHHHHHHhccCeEEEEEcCCCCEEecCCHHHHHHHHHHHHhcCceeEecCCCCCCCcChHhcccHHHHHHHHH
Confidence 89999999999999988899999999999999999999999999999999999999995 99999999877777766543
Q ss_pred hc---------cccccCcc---------cccCceeeeeeEECchhhHHHHhhhcCCC
Q psy9442 80 QF---------SILGINTR---------ELYLPTRMQRVCIDPAKHKALVETLSGDK 118 (127)
Q Consensus 80 ~~---------~v~~~~~~---------~~~~p~~i~~~~~~pv~~~~~v~~~~~~~ 118 (127)
+. .+.++... ....+.||.+++++||+|.++|+.|.+..
T Consensus 702 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~yw~~~l~~pV~F~~av~~l~~~~ 758 (965)
T 3hhd_A 702 KVIREPKPRSARWLSTSIPEAQWHSSLARTSSAEYNVNNLVSPVLFQEALWHVPEHA 758 (965)
T ss_dssp HHCSSCCBCCTTBCCSSSCGGGTTSHHHHBCCHHHHHHHHHSCBCHHHHHTTSCTTC
T ss_pred HhhccCCCCcceEEeeecccccccccchhcccHHHHHHHhhCcEeHHHHHHHHhcCC
Confidence 32 23333211 12467899999999999999999987543
No 17
>3g87_A Malonyl COA-acyl carrier protein transacylase; ssgcid, niaid, decode biostructures, dried seaweed, acyltran transferase; 2.30A {Burkholderia pseudomallei}
Probab=99.78 E-value=6e-20 Score=144.99 Aligned_cols=116 Identities=17% Similarity=0.202 Sum_probs=98.1
Q ss_pred Ceee-cCCHHHHHhhCC----CCeEEEEeeCCCceEEeCcHHHHHHHHHHHhhcCceEEEeeccCccccccccccHHHHH
Q psy9442 1 MAAV-GLSWEEVKARAP----ADIVAACHNNVDSVTISGPPAAIDKFVAELSAEGVFAKKVASSGFTGKLDWTGNWISYI 75 (127)
Q Consensus 1 M~av-~~~~~~~~~~l~----~~v~iA~~N~p~~~vvsG~~~~i~~~~~~l~~~g~~~~~L~v~~a~h~~~~~~~~~~~~ 75 (127)
|+|| +++.++++++|. .+++|||+|+|+|+||||+.++|+++.+.|+++|+++++|+|++|||++.|++...+|.
T Consensus 129 M~AV~~~~~~~v~~~l~~~~~~~v~IA~~Nsp~~~ViSG~~~al~~l~~~l~~~g~~~~~L~V~~afHS~~m~~~~~~~~ 208 (394)
T 3g87_A 129 MAAIVNASREQIERTLDEHGLVDTAIANDNTPSQLVISGPAHEIARAEALFQHDRVRYLRLNTSGAFHSKFMRPAQQAFA 208 (394)
T ss_dssp EEEEESCCHHHHHHHHHHTTCTTCEEEEEEETTEEEEEEEHHHHHHHGGGSCSSSCEEEECSCSSCTTSGGGHHHHHHHH
T ss_pred eEEEECCCHHHHHHHHHhcCCCcEEEEEEcCCCceEecCCHHHHHHHHHHHHhCCCeEEECCCCCCcCChhhhhhHHHHH
Confidence 7887 999999999986 46999999999999999999999999999999999999999999999998887666666
Q ss_pred hhhh-------hccccccCccccc----CceeeeeeEECchhhHHHHhhhcC
Q psy9442 76 DTML-------QFSILGINTRELY----LPTRMQRVCIDPAKHKALVETLSG 116 (127)
Q Consensus 76 d~ll-------~~~v~~~~~~~~~----~p~~i~~~~~~pv~~~~~v~~~~~ 116 (127)
+.+. +.+++|+.+...+ .+.||.+++++||+|.++++.+..
T Consensus 209 ~~l~~~~~~~p~ipv~S~vtg~~~~~~~~~~~~~~~l~~pV~f~~av~~l~~ 260 (394)
T 3g87_A 209 AHLQSFRLADPAIPVISNVSARPYENGRVSEGLAQQIASPVRWCESIRYLLA 260 (394)
T ss_dssp HHHTTSCCCCCSSCEECTTTSSBCCTTCHHHHHHHGGGSCBCHHHHHHHHHH
T ss_pred HHHhcCCCCCCCceEEECCCCcCCCchHHHHHHHHHHhCceeHHHHHHHHHh
Confidence 5542 4456666444332 356899999999999999998853
No 18
>2c2n_A Malonyl COA-acyl carrier protein transacylase; fatty acid synthase, lipid synthesis, mitochondrion transfer transferase; HET: AE4; 1.55A {Homo sapiens}
Probab=99.74 E-value=1.6e-18 Score=134.21 Aligned_cols=101 Identities=11% Similarity=-0.012 Sum_probs=84.8
Q ss_pred CCeEEEEeeCCCceEEeCcHHHHHHHHHHHhhcCc-eEEEeeccCccccccccccHHHHHhhh-------hhccccccCc
Q psy9442 17 ADIVAACHNNVDSVTISGPPAAIDKFVAELSAEGV-FAKKVASSGFTGKLDWTGNWISYIDTM-------LQFSILGINT 88 (127)
Q Consensus 17 ~~v~iA~~N~p~~~vvsG~~~~i~~~~~~l~~~g~-~~~~L~v~~a~h~~~~~~~~~~~~d~l-------l~~~v~~~~~ 88 (127)
+.++|||+|+|+|+||||+.++|+++.+.|+++|+ ++++|+|++|||++.|++....|.+.+ .+.+++++.+
T Consensus 187 ~~v~iA~~Nsp~~~VisG~~~~l~~l~~~l~~~g~~~~~~L~v~~afHS~~m~~~~~~~~~~l~~~~~~~p~ip~~S~vt 266 (339)
T 2c2n_A 187 PVCEVSNYLFPDCRVISGHQEALRFLQKNSSKFHFRRTRMLPVSGAFHTRLMEPAVEPLTQALKAVDIKKPLVSVYSNVH 266 (339)
T ss_dssp CCEEEEEEEETTEEEEEEEHHHHHHHHHTGGGGTCCEEEECSCSSCTTSGGGGGGHHHHHHHHHTCCCCCCSSEEECTTT
T ss_pred CeEEEEEEcCCCCEEEECCHHHHHHHHHHHHhcCCceEEECCCCCCcchHHHHHHHHHHHHHHhcCCCCCCCceEEECCC
Confidence 36999999999999999999999999999999998 899999999999999887766666544 2445566644
Q ss_pred ccc-----cCceeeeeeEECchhhHHHHhhhcCC
Q psy9442 89 REL-----YLPTRMQRVCIDPAKHKALVETLSGD 117 (127)
Q Consensus 89 ~~~-----~~p~~i~~~~~~pv~~~~~v~~~~~~ 117 (127)
... ..+.||.+++++||+|.++++.+..+
T Consensus 267 g~~~~~~~~~~~y~~~~l~~pV~f~~av~~l~~~ 300 (339)
T 2c2n_A 267 GHRYRHPGHIHKLLAQQLVSPVKWEQTMHAIYER 300 (339)
T ss_dssp SSBCCCGGGHHHHHHHHTTSCEEHHHHHHHHTCC
T ss_pred CCCCCChhhHHHHHHHHhhcceeHHHHHHHHHhc
Confidence 332 24689999999999999999999654
No 19
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea}
Probab=99.73 E-value=1.9e-18 Score=148.14 Aligned_cols=116 Identities=16% Similarity=0.185 Sum_probs=99.6
Q ss_pred CeeecCCHHHHHhhCC---CCeEEEEeeCCCceEEeCcHHHHHHHHHHHhhcCceEEEeeccCccccccccccHHHHHhh
Q psy9442 1 MAAVGLSWEEVKARAP---ADIVAACHNNVDSVTISGPPAAIDKFVAELSAEGVFAKKVASSGFTGKLDWTGNWISYIDT 77 (127)
Q Consensus 1 M~av~~~~~~~~~~l~---~~v~iA~~N~p~~~vvsG~~~~i~~~~~~l~~~g~~~~~L~v~~a~h~~~~~~~~~~~~d~ 77 (127)
|++|+++.+++++++. +.++|||+|+|+++||||+.++|+++.+.|+++|+++++|+|++|||++.|++...+|.+.
T Consensus 680 M~av~~~~~~v~~~l~~~~~~v~iA~~Nsp~~~viSG~~~ai~~l~~~l~~~gi~~~~L~v~~AfHS~~m~~~~~~~~~~ 759 (917)
T 2hg4_A 680 MASFGLGTEQAAERIGRFAGALSIASVNGPRSVVVAGESGPLDELIAECEAEAHKARRIPVDYASHSPQVESLREELLTE 759 (917)
T ss_dssp EEEESSCHHHHHHHHGGGTTSEEEEEEEETTEEEEEECTTHHHHHHHHHHHHTCCEEEESCSCCCSSGGGGGGHHHHHHH
T ss_pred EEEEeCCHHHHHHHHhhcCCceEEEEEcCCCceEEecCHHHHHHHHHHHHhcCceeEEecCCccccCcchHHHHHHHHHH
Confidence 8899999999999986 3699999999999999999999999999999999999999999999999888777776654
Q ss_pred h-------hhccccccCccc-----ccCceeeeeeEECchhhHHHHhhhcC
Q psy9442 78 M-------LQFSILGINTRE-----LYLPTRMQRVCIDPAKHKALVETLSG 116 (127)
Q Consensus 78 l-------l~~~v~~~~~~~-----~~~p~~i~~~~~~pv~~~~~v~~~~~ 116 (127)
+ .+.+++|+.+.. ...+.||.+++++||+|.++|+.+..
T Consensus 760 l~~i~~~~p~ip~~S~vtg~~~~~~~~~~~yw~~~l~~pV~F~~av~~l~~ 810 (917)
T 2hg4_A 760 LAGISPVSADVALYSTTTGQPIDTATMDTAYWYANLREQVRFQDATRQLAE 810 (917)
T ss_dssp STTCCCCCCSSEECCTTTSSCCCGGGCSHHHHHHHHHSCCCHHHHHHHHHH
T ss_pred HhcCCCCCCcceEEecCCCcccCcccCCHHHHHHHhhCcccHHHHHHHHHh
Confidence 4 234555654332 34678999999999999999999853
No 20
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}
Probab=99.72 E-value=1.8e-18 Score=148.29 Aligned_cols=116 Identities=20% Similarity=0.194 Sum_probs=99.9
Q ss_pred CeeecCCHHHHHhhCC---CCeEEEEeeCCCceEEeCcHHHHHHHHHHHhhcCceEEEeeccCccccccccccHHHHHhh
Q psy9442 1 MAAVGLSWEEVKARAP---ADIVAACHNNVDSVTISGPPAAIDKFVAELSAEGVFAKKVASSGFTGKLDWTGNWISYIDT 77 (127)
Q Consensus 1 M~av~~~~~~~~~~l~---~~v~iA~~N~p~~~vvsG~~~~i~~~~~~l~~~g~~~~~L~v~~a~h~~~~~~~~~~~~d~ 77 (127)
|++|+++.+++++++. ++++|||+|+|+++||||+.++|+++.+.|+++|+++++|+|++|||+..|++-..+|.+.
T Consensus 664 M~aV~~~~~~~~~~l~~~~~~v~iA~~Nsp~~~viSG~~~ai~~l~~~l~~~gi~~~~L~v~~AfHS~~m~~~~~~~~~~ 743 (915)
T 2qo3_A 664 MAAVALGEAAVRERLRPWQDRLSVAAVNGPRSVVVSGEPGALRAFSEDCAAEGIRVRDIDVDYASHSPQIERVREELLET 743 (915)
T ss_dssp EEEESSCHHHHHHTTGGGTTCCCCCEEEETTEEEEEECHHHHHHHHHHHTTTTCCBCCCSCSSCTTSGGGTTTHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHhcCCcEEEEEEcCCcceEeecCHHHHHHHHHHHHhCCeeEEEecCCcceechHHHHHHHHHHHH
Confidence 8999999999999996 4799999999999999999999999999999999999999999999999988777666654
Q ss_pred hh-------hccccccCccc-----ccCceeeeeeEECchhhHHHHhhhcC
Q psy9442 78 ML-------QFSILGINTRE-----LYLPTRMQRVCIDPAKHKALVETLSG 116 (127)
Q Consensus 78 ll-------~~~v~~~~~~~-----~~~p~~i~~~~~~pv~~~~~v~~~~~ 116 (127)
+- +.+++|+.+.. ...+.||.+++++||+|.++|+.+..
T Consensus 744 l~~i~~~~p~ip~~S~vtg~~~~~~~~~~~yw~~~l~~pV~F~~av~~l~~ 794 (915)
T 2qo3_A 744 TGDIAPRPARVTFHSTVESRSMDGTELDARYWYRNLRETVRFADAVTRLAE 794 (915)
T ss_dssp HTTCCCCCCSSEEECTTTCSEECGGGCCHHHHHHHHHSCEEHHHHHHHHHH
T ss_pred HhccCCCCCCCeEEeCCCCcccCcccCCHHHHHHHhhCcCCHHHHHHHHHh
Confidence 42 34555654332 34678999999999999999999854
No 21
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=99.71 E-value=1.2e-17 Score=153.86 Aligned_cols=117 Identities=32% Similarity=0.470 Sum_probs=99.6
Q ss_pred CeeecCCHHHHHhhCCCCeEEEEeeCCCceEEeCcHHHHHHHHHHHhhcCceEEEeec-cCccccccccccHHHHHhhhh
Q psy9442 1 MAAVGLSWEEVKARAPADIVAACHNNVDSVTISGPPAAIDKFVAELSAEGVFAKKVAS-SGFTGKLDWTGNWISYIDTML 79 (127)
Q Consensus 1 M~av~~~~~~~~~~l~~~v~iA~~N~p~~~vvsG~~~~i~~~~~~l~~~g~~~~~L~v-~~a~h~~~~~~~~~~~~d~ll 79 (127)
|+||+++.+++++++.++++|||+|||+++||||+.++|+++.+.|+++|+++++|+| ++|||+.+|++...+|.+.+-
T Consensus 620 M~av~~~~~~~~~~~~~~v~iA~~Nsp~s~visG~~~ai~~~~~~l~~~g~~~~~L~v~~~AfHS~~m~~~~~~~~~~l~ 699 (2512)
T 2vz8_A 620 MAAVGLSWEECKQRCPPGIVPACHNSKDTVTISGPQAAMSEFLQQLKREDVFVKEVRTGGIAFHSYFMESIAPTLLRQLR 699 (2512)
T ss_dssp EEEECSCHHHHHTTSCTTCCEEEECSSSCEEEEEEHHHHHHHHHHHHTTTCCEEEECCTTCCCSSGGGTTTHHHHHHHHH
T ss_pred EEEecCCHHHHHHhccCCeEEEEEcCCCCEEEECCHHHHHHHHHHHHHCCceEEEcCCCCccccHHHHHhHHHHHHHHHH
Confidence 8999999999999998889999999999999999999999999999999999999999 689999999987777766553
Q ss_pred hc---------cccccCcc---------cccCceeeeeeEECchhhHHHHhhhcCC
Q psy9442 80 QF---------SILGINTR---------ELYLPTRMQRVCIDPAKHKALVETLSGD 117 (127)
Q Consensus 80 ~~---------~v~~~~~~---------~~~~p~~i~~~~~~pv~~~~~v~~~~~~ 117 (127)
+. .+.++.+. ....|.||.+++++||+|.++|+.+...
T Consensus 700 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~yw~~~l~~pV~F~~av~~l~~~ 755 (2512)
T 2vz8_A 700 KVILDPKPRSKRWLSTSIPEAQWQGSLARTFSAEYSVNNLVSPVLFQEALQHVPAH 755 (2512)
T ss_dssp HHSCSCCBCCTTEECSSSCGGGTTSSSTTBCCHHHHHHHHHSCEEHHHHHTTSCSS
T ss_pred hccccCCCCCceEEEeecCCCcccCcccccCCHHHHHHHhhccccHHHHHHhhhcC
Confidence 22 23333211 2346789999999999999999998643
No 22
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Probab=99.53 E-value=3e-15 Score=132.48 Aligned_cols=113 Identities=12% Similarity=0.117 Sum_probs=93.0
Q ss_pred Ceee-cCCHHHHHhhCC---------CCeEEEEeeCCCceEEeCcHHHHHHHHHHHhhcCc------------------e
Q psy9442 1 MAAV-GLSWEEVKARAP---------ADIVAACHNNVDSVTISGPPAAIDKFVAELSAEGV------------------F 52 (127)
Q Consensus 1 M~av-~~~~~~~~~~l~---------~~v~iA~~N~p~~~vvsG~~~~i~~~~~~l~~~g~------------------~ 52 (127)
|+|| +++.++++++|. ..++|||+|||+|+||||+.++|+++.+.|++.|+ +
T Consensus 338 MLAVvGLs~EeVeelLae~n~~Lp~g~~V~IA~vNSP~QVVISG~~eALeaL~a~Lka~Ga~~g~dQsriPFSkRKP~~r 417 (2006)
T 2pff_B 338 MLSISNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVSGPPQSLYGLNLTLRKAKAPSGLDQSRIPFSERKLKFS 417 (2006)
T ss_dssp CEECCSSCTTHHHHHHHHHHHHSCTTTCCBCCCCCSSSCCEEBCSHHHHHHHHHHHHTTSCCSCCCTTSCCTTTCCCCCC
T ss_pred eEEEcCCCHHHHHHHHHHhhhcCCCCCEEEEEEEeCCCCEEEECCHHHHHHHHHHHHhcCCCccccccCCcccccCCcce
Confidence 8885 899999999885 24999999999999999999999999999999998 4
Q ss_pred EEEeeccCccccccccccHHHHHhhhh--h---------ccccccCccc------ccCceeeeeeEE-CchhhHHHHhh
Q psy9442 53 AKKVASSGFTGKLDWTGNWISYIDTML--Q---------FSILGINTRE------LYLPTRMQRVCI-DPAKHKALVET 113 (127)
Q Consensus 53 ~~~L~v~~a~h~~~~~~~~~~~~d~ll--~---------~~v~~~~~~~------~~~p~~i~~~~~-~pv~~~~~v~~ 113 (127)
+++|+|++|||+++|.+....|.+.+. + .+++++.+.. ...+.+|.++++ +||+|.++++.
T Consensus 418 aR~LpVS~AFHSPlMepAaeeL~e~L~~~~I~f~~~~P~IPVySnVTG~~l~~~~e~IaeyLvrQL~rsPVrF~qAVe~ 496 (2006)
T 2pff_B 418 NRFLPVASPFHSHLLVPASDLINKDLVKNNVSFNAKDIQIPVYDTFDGSDLRVLSGSISERIVDCIIRLPVKWETTTQF 496 (2006)
T ss_dssp CCBCSCSSCCSCSSSCTTHHHHHHHHHTSTTCCCCTTCCSCCCCSSSCCCSCCCSSCSTTHHHHTTTTSCCCTHHHHCC
T ss_pred EEEeeCCCccCcHHHHHHHHHHHHHhccCCccccCCCCCeEEEECCcCCCCCChHHHHHHHHHhcccCCCEehHHHHhc
Confidence 899999999999999987777765544 2 3445553332 235678888887 99999999987
No 23
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=99.49 E-value=1.9e-14 Score=130.54 Aligned_cols=113 Identities=13% Similarity=0.122 Sum_probs=91.9
Q ss_pred Ceee-cCCHHHHHhhCC---------CCeEEEEeeCCCceEEeCcHHHHHHHHHHHhhcCce------------------
Q psy9442 1 MAAV-GLSWEEVKARAP---------ADIVAACHNNVDSVTISGPPAAIDKFVAELSAEGVF------------------ 52 (127)
Q Consensus 1 M~av-~~~~~~~~~~l~---------~~v~iA~~N~p~~~vvsG~~~~i~~~~~~l~~~g~~------------------ 52 (127)
|+|| +++.++++++|. ..++|||+|||+|+||||++++|+++.+.|++.|++
T Consensus 338 MlAV~gl~~e~v~~ll~~~~~~l~~g~~V~IA~~NsP~qvVISG~~~aL~~l~~~L~~~ga~~~~~~~~~pfs~Rkp~~~ 417 (2051)
T 2uv8_G 338 MLSISNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVSGPPQSLYGLNLTLRKAKAPSGLDQSRIPFSERKLKFS 417 (2051)
T ss_dssp EEEEESSCHHHHHHHHHHHHHTSCGGGCCEEEECCSSSEEEEESCHHHHHHHHHHHHHHSCCTTCCGGGSCGGGCCCCCE
T ss_pred eEEeecCCHHHHHHHHHHhhhccCCCCceEEEEEcCCCCeEecCCHHHHHHHHHHHHhcCCccccccccccccccccccc
Confidence 7885 899999999986 149999999999999999999999999999998874
Q ss_pred EEEeeccCccccccccccHHHHHhhhh-----------hccccccCcccc------cCceeeeeeEE-CchhhHHHHhh
Q psy9442 53 AKKVASSGFTGKLDWTGNWISYIDTML-----------QFSILGINTREL------YLPTRMQRVCI-DPAKHKALVET 113 (127)
Q Consensus 53 ~~~L~v~~a~h~~~~~~~~~~~~d~ll-----------~~~v~~~~~~~~------~~p~~i~~~~~-~pv~~~~~v~~ 113 (127)
+++|+|++|||+++|.+....+.+.+. ..+++++.+... ..+.++.+++. +||+|.++++.
T Consensus 418 ~~~L~Vs~aFHSplM~pa~~~l~~~L~~~~i~~~~~~p~iPv~SnvtG~~~~~~~~~i~~~L~~qi~~~PV~w~~av~~ 496 (2051)
T 2uv8_G 418 NRFLPVASPFHSHLLVPASDLINKDLVKNNVSFNAKDIQIPVYDTFDGSDLRVLSGSISERIVDCIIRLPVKWETTTQF 496 (2051)
T ss_dssp EEECSCSSCTTSTTTHHHHHHHHHHHHSSSCCCCTTTCCSCBBCTTTCSBSSSCSSCHHHHHHHHHHTSCBCHHHHTCC
T ss_pred eEEccCCCCccChhhHHHHHHHHHHHHhCCccccCCCCcceEEECCCCcccCCchHHHHHHHHHhhccCccchHHHhcc
Confidence 999999999999999877666655443 334455543322 23567888888 99999999986
No 24
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=99.47 E-value=3.4e-14 Score=129.23 Aligned_cols=114 Identities=12% Similarity=0.147 Sum_probs=92.1
Q ss_pred Ceee-cCCHHHHHhhCC---------CCeEEEEeeCCCceEEeCcHHHHHHHHHHHhhcCc------------------e
Q psy9442 1 MAAV-GLSWEEVKARAP---------ADIVAACHNNVDSVTISGPPAAIDKFVAELSAEGV------------------F 52 (127)
Q Consensus 1 M~av-~~~~~~~~~~l~---------~~v~iA~~N~p~~~vvsG~~~~i~~~~~~l~~~g~------------------~ 52 (127)
|++| +++.++++++|. ..++|||+|||+|+||||++++++++.+.|++.|+ +
T Consensus 332 MlAV~gl~~e~v~~~l~~~~~~lp~~~~v~IA~~Nsp~qvVISG~~~aL~~l~~~L~~~g~~~~~~~~~ipfs~rkp~~~ 411 (2060)
T 2uva_G 332 MLSIRDLTRSAVQEHIDATNQHLPEDRHIGISLVNSARNFVVTGPPISLYGLNLRLRKVKAPTGLDQNRIPFTQRKARFV 411 (2060)
T ss_dssp EEEEETCCHHHHHHHHHHHHHTSCGGGCCEEEEESSSSEEEEESCHHHHHHHHHHHHTTSCCSSCCCTTSCGGGSCCCCE
T ss_pred EEEEeCCCHHHHHHHHHHhhhcCCCCCeEEEEEEeCCCCeEeeCCHHHHHHHHHHHHHcCCcccccccccccccccccce
Confidence 7887 999999999885 25999999999999999999999999999999987 6
Q ss_pred EEEeeccCccccccccccHHHHHhhhh---------hccccccCcccc-------cCceeeeeeEE-CchhhHHHHhhh
Q psy9442 53 AKKVASSGFTGKLDWTGNWISYIDTML---------QFSILGINTREL-------YLPTRMQRVCI-DPAKHKALVETL 114 (127)
Q Consensus 53 ~~~L~v~~a~h~~~~~~~~~~~~d~ll---------~~~v~~~~~~~~-------~~p~~i~~~~~-~pv~~~~~v~~~ 114 (127)
+++|+|++|||+++|.+....+.+.+. ..+++++.+... ....++.+++. +||+|.++++.+
T Consensus 412 ~~~L~Vs~pFHSp~m~~a~~~l~~~l~~i~~~~~~p~iPv~S~vtG~~~~~~~~~~l~~~l~~qi~~~PV~w~~av~~l 490 (2060)
T 2uva_G 412 NRFLPITAPFHSPYLAGAHAHILGDVDDMKIPASSLVIPVYDTKTGQDLRELGDEDIIPELVRMITYDPVNWETATVFP 490 (2060)
T ss_dssp EEECSCCSCCSSTTSHHHHHHHHHHTSSSCCCGGGCSSCBBCSSSCCBGGGSSSCCSHHHHHHHHHTSCBCHHHHTCCS
T ss_pred eEEccCCCCcchHHHHHHHHHHHHHHhhCCccCCCCCcEEEECCCCCccCcCChhHHHHHHHHHhccCcEeHHHHHHhc
Confidence 999999999999999876666665432 345556543332 23356666666 999999999977
No 25
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=99.44 E-value=3.5e-14 Score=132.25 Aligned_cols=111 Identities=12% Similarity=0.012 Sum_probs=92.7
Q ss_pred Ceee-cCCHHHHHhhCC---C------CeEEEEeeCCCceEEeCcHHHHHHHHHHHhhcCc------------------e
Q psy9442 1 MAAV-GLSWEEVKARAP---A------DIVAACHNNVDSVTISGPPAAIDKFVAELSAEGV------------------F 52 (127)
Q Consensus 1 M~av-~~~~~~~~~~l~---~------~v~iA~~N~p~~~vvsG~~~~i~~~~~~l~~~g~------------------~ 52 (127)
|+|| +++.++++++|. . .|+|||||+|+|+||||+.++++++.+.|++.|+ +
T Consensus 207 M~AV~gl~~~~v~~~~~~~~~~~~~~~~v~iAn~Nsp~q~VISG~~~al~~~~~~l~~~ga~~~~~r~~k~~Gg~~f~pr 286 (3089)
T 3zen_D 207 MVSVTNADPERIYELLEEFSSDVRTVLPPVLSIRNGRRSVVITGTPEQLSRFELYCTQIAEKEEAERKNKLRGGAVFAPV 286 (3089)
T ss_dssp EEEEESSCHHHHHHHHHHHHTTSCTTSCCEEEEECSSSCEEEESCHHHHHHHHHHHHHHHHHHHHHHTTTCSTTCCCCCE
T ss_pred eEEEeCCCHHHHHHHHHHhhccCCCcceEEEEEEcCCCCEEEeCCHHHHHHHHHHHHhcCCccccchhhccccccccCce
Confidence 7886 899999999995 1 2999999999999999999999999999987665 3
Q ss_pred EEEeeccCccccccccccHHHHHhhhhhccccccCcccccCceeeeeeEECchhhHHHHhhhcC
Q psy9442 53 AKKVASSGFTGKLDWTGNWISYIDTMLQFSILGINTRELYLPTRMQRVCIDPAKHKALVETLSG 116 (127)
Q Consensus 53 ~~~L~v~~a~h~~~~~~~~~~~~d~ll~~~v~~~~~~~~~~p~~i~~~~~~pv~~~~~v~~~~~ 116 (127)
+++|+|++|||+++|.+....+.+-+....+ .....+.++.+++..||+|.++++.|..
T Consensus 287 ~~~L~Vs~pFHSplM~~A~~~l~~~l~~~~~-----~~~~i~~~l~~ql~~PV~W~~~v~~l~~ 345 (3089)
T 3zen_D 287 FDPVQVEVGFHTPRLSDGIEIVGRWAETVGL-----DVELAKELTESILVRQVDWVDEITELHE 345 (3089)
T ss_dssp EEECSCCSCCSSGGGHHHHHHHHHHHHTTTT-----CCTTHHHHHHHHHTSCBCCHHHHHHHHT
T ss_pred EEECCCCCCccCCchHHHHHHHHHHHHhCCC-----CHHHHHHHHHHHccCcEeHHHHHHHHHH
Confidence 8999999999999888777776665544433 1245678999999999999999999853
No 26
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=99.42 E-value=1.4e-13 Score=128.24 Aligned_cols=116 Identities=11% Similarity=0.004 Sum_probs=91.8
Q ss_pred Ceee-----cCCHHHHHhhCC-------CCeEEEEeeCCC-ceEEeCcHHHHHHHHHHHhhc-----Cce--EEEeeccC
Q psy9442 1 MAAV-----GLSWEEVKARAP-------ADIVAACHNNVD-SVTISGPPAAIDKFVAELSAE-----GVF--AKKVASSG 60 (127)
Q Consensus 1 M~av-----~~~~~~~~~~l~-------~~v~iA~~N~p~-~~vvsG~~~~i~~~~~~l~~~-----g~~--~~~L~v~~ 60 (127)
|+|| +++.++++++|. +.++|||||+|+ |+||||+.++|+++.+.|+++ |++ ..+++|++
T Consensus 1500 M~AV~~~~igl~~~~v~~~l~~~~~~~~~~v~IA~~Nsp~~q~ViSG~~~al~~l~~~l~~~~~~~g~~~~~~l~l~V~~ 1579 (3089)
T 3zen_D 1500 LAAIRPSQIDLDDADVKDFVAEISERTGEFLEIVNFNLRGSQYAIAGTVAGLEALEEEIERRRQITGGKRSFILVPGIDV 1579 (3089)
T ss_dssp EEEECCCSSSCCHHHHHHHHHHHHHHHCCCEEEEEECSSSSCEEEEEEHHHHHHHHHHHHHHSTTCSSCTTEEEETTCCC
T ss_pred EEEEecccCCCCHHHHHHHHHHhhhccCCeEEEEEEcCCCCeEEEEcCHHHHHHHHHHHHhhhhhcCCceEEEccCCCCc
Confidence 7887 999999999985 249999999997 999999999999999999887 444 44457999
Q ss_pred ccccccccccHHHHHhhhhh------------ccccccCccccc------------------------------------
Q psy9442 61 FTGKLDWTGNWISYIDTMLQ------------FSILGINTRELY------------------------------------ 92 (127)
Q Consensus 61 a~h~~~~~~~~~~~~d~ll~------------~~v~~~~~~~~~------------------------------------ 92 (127)
|||+.+|.+...+|.+.+.+ ..++++.+..++
T Consensus 1580 aFHS~~m~p~~~~~~~~L~~~~~~~~~~~~p~ip~iSnvtg~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~~w~~~~~~~ 1659 (3089)
T 3zen_D 1580 PFHSSVLRVGVADFRRSLERVMPRDKDPELIIGRYIPNLVPRPFTLDRDFIQEIRDLVPAEPLDEVLADYDTWRNEKPKE 1659 (3089)
T ss_dssp CCSSTTCGGGHHHHHHHHHHHSCSCCCHHHHTTTEECSSSCSCCCCSHHHHHHHHHHSCCHHHHHHHHCCCCCSTTHHHH
T ss_pred ccChHHHHHHHHHHHHHHHhcccCCCCCCCCCceEEeCCCCceeeccccccccccccccccccccccCChHHhhhcchhh
Confidence 99999998776666655433 245555433332
Q ss_pred -----CceeeeeeEECchhhHHHHhhhcC
Q psy9442 93 -----LPTRMQRVCIDPAKHKALVETLSG 116 (127)
Q Consensus 93 -----~p~~i~~~~~~pv~~~~~v~~~~~ 116 (127)
.++|+.++++.||+|.++++.|..
T Consensus 1660 l~~~~~~e~l~~ql~~PVrf~~av~~l~~ 1688 (3089)
T 3zen_D 1660 LCRKVVIELLAWQFASPVRWIETQDLLFI 1688 (3089)
T ss_dssp HHHHHHHHHHHTTTTSCEEHHHHHHHHHH
T ss_pred hhhhhHHHHHHHHHhCcchHHHHHHHHHh
Confidence 346788889999999999999965
No 27
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=99.11 E-value=7.1e-11 Score=107.78 Aligned_cols=114 Identities=11% Similarity=-0.003 Sum_probs=82.6
Q ss_pred CeeecC-------CHHHHHhhCC-------CCeEEEEeeC-CCceEEeCcHHHHHHHHHHH-------------------
Q psy9442 1 MAAVGL-------SWEEVKARAP-------ADIVAACHNN-VDSVTISGPPAAIDKFVAEL------------------- 46 (127)
Q Consensus 1 M~av~~-------~~~~~~~~l~-------~~v~iA~~N~-p~~~vvsG~~~~i~~~~~~l------------------- 46 (127)
|+||.. +.+++++++. ..++|||+|+ |+|+||||+.++|+++.+.|
T Consensus 1865 M~AV~~~~~~~~~~~~~l~~~~~~i~~~~g~~v~ian~N~~p~q~VisG~~~al~~l~~~l~~l~~~~~~~~~~~~~~~~ 1944 (2060)
T 2uva_G 1865 MCAVNPSRISPTFTEQALQYVVENIAEVTGWLLEIVNYNVANMQYVAAGDLRALDTLANVLNILKMQKIDIQALMQSMSL 1944 (2060)
T ss_dssp CEEECGGGTCTTCCHHHHHHHHHHHHHHSCSCEEEEEEEETTTEEEEEEBTTHHHHHHHHHHHHHHTTCCTTTTTTSSCH
T ss_pred EEEEEccccccCCCHHHHHHHHHHHhhccCCeEEEEEEeCCCCcEEEECCHHHHHHHHHHhhhhcccccccccccccccc
Confidence 888864 7888877764 2599999999 99999999999999998753
Q ss_pred --------------------------hhcCceEEEee-ccCccccccccccHHHHHhhhhh-------------cccccc
Q psy9442 47 --------------------------SAEGVFAKKVA-SSGFTGKLDWTGNWISYIDTMLQ-------------FSILGI 86 (127)
Q Consensus 47 --------------------------~~~g~~~~~L~-v~~a~h~~~~~~~~~~~~d~ll~-------------~~v~~~ 86 (127)
.++|+++++|+ |++|||+.+|.+...+|...|.+ ..+++|
T Consensus 1945 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~L~gV~~aFHS~~m~~~~~~f~~~L~~~i~~~~i~~~~~~~p~isn 2024 (2060)
T 2uva_G 1945 EDVRAHLVEIIQECRKQTEAKPQPVQLERGFATIPLRGIDVPFHSTFLRSGVKPFRSFLLKKINKTTIDPSKLIGKYIPN 2024 (2060)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCSSCCCCCCSSEEECTTCCSCCSSSGGGTTHHHHHHHHHHHCCGGGCCHHHHTTTEECS
T ss_pred hhhhhhhhhhhhhhhhhhhccccchhhhcCceEEECCCcCcccccHHHHHHHHHHHHHHHhhcccccCCCCCCCceEEEC
Confidence 15789999999 99999999998876666655433 256676
Q ss_pred CcccccC--ceeeeee--EECchhhHHHHhhh
Q psy9442 87 NTRELYL--PTRMQRV--CIDPAKHKALVETL 114 (127)
Q Consensus 87 ~~~~~~~--p~~i~~~--~~~pv~~~~~v~~~ 114 (127)
.+..++. ++|+..+ ...+.+|.+.|+++
T Consensus 2025 vtg~~~~~~~~~~~~l~~~~~sp~~~~~l~~~ 2056 (2060)
T 2uva_G 2025 VTAKPFEISKEYFEEVHRLTGSPKIANILANW 2056 (2060)
T ss_dssp SSCSCCCCSTTHHHHHHHHSCCHHHHHHHHSG
T ss_pred CCCccccCCHHHHHHHHHhhCCCcHHHHHHHH
Confidence 5444332 3344332 12345777777764
No 28
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=99.04 E-value=9.5e-11 Score=106.72 Aligned_cols=115 Identities=13% Similarity=0.031 Sum_probs=81.2
Q ss_pred Ceeec-------CCHHHHHhhCC-------CCeEEEEeeC-CCceEEeCcHHHHHHHHHHH-------------------
Q psy9442 1 MAAVG-------LSWEEVKARAP-------ADIVAACHNN-VDSVTISGPPAAIDKFVAEL------------------- 46 (127)
Q Consensus 1 M~av~-------~~~~~~~~~l~-------~~v~iA~~N~-p~~~vvsG~~~~i~~~~~~l------------------- 46 (127)
|+||. ++.++++.++. ..++|||||+ |+|+||||+.++++++.+.|
T Consensus 1854 M~AV~~~~~~~~~~~~~l~~~~~~i~~~~g~~v~IAn~N~~p~q~VvsG~~~al~~l~~~l~~l~~~~~~~~~~~~~~~~ 1933 (2051)
T 2uv8_G 1854 MIAINPGRVAASFSQEALQYVVERVGKRTGWLVEIVNYNVENQQYVAAGDLRALDTVTNVLNFIKLQKIDIIELQKSLSL 1933 (2051)
T ss_dssp EEEECHHHHCTTCCHHHHHHHHHHHHHHHTSCEEEEEEEETTTEEEEEEEHHHHHHHHHHHHHHHHTTCCHHHHHHHSCH
T ss_pred EEEEEccccccCCCHHHHHHHHHHhhhccCCeEEEEEEcCCCCeEEEEeCHHHHHHHHHhhhhhcccccccccccccccc
Confidence 77875 47888777663 3599999999 99999999999999987753
Q ss_pred --------------------------hhcCceEEEee-ccCccccccccccHHHHHhhhhh-------------cccccc
Q psy9442 47 --------------------------SAEGVFAKKVA-SSGFTGKLDWTGNWISYIDTMLQ-------------FSILGI 86 (127)
Q Consensus 47 --------------------------~~~g~~~~~L~-v~~a~h~~~~~~~~~~~~d~ll~-------------~~v~~~ 86 (127)
.++|+++++|+ |++|||+.+|.+...+|.+.|.+ ..+++|
T Consensus 1934 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~G~~~~~L~gVs~aFHS~~m~p~~~~f~~~L~~~i~~~~i~~~~~~~p~iSn 2013 (2051)
T 2uv8_G 1934 EEVEGHLFEIIDEASKKSAVKPRPLKLERGFACIPLVGISVPFHSTYLMNGVKPFKSFLKKNIIKENVKVARLAGKYIPN 2013 (2051)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCTTCCCCCCSSEEECTTCCSCCSSGGGSTTSTTHHHHHHTTSCGGGCCHHHHTTTEECS
T ss_pred hhhhhhhhhhhhhhhhhccccccchhhhcCcceeecCCCCcccccHHHHHHHHHHHHHHHhhcccccCCCCCCCCeEEEC
Confidence 15789999999 99999999888654444443322 356677
Q ss_pred CcccccC--ceeeeee--EECchhhHHHHhhhc
Q psy9442 87 NTRELYL--PTRMQRV--CIDPAKHKALVETLS 115 (127)
Q Consensus 87 ~~~~~~~--p~~i~~~--~~~pv~~~~~v~~~~ 115 (127)
.+..++. ++|+..+ ...+++|.+.|+++.
T Consensus 2014 vtg~~~~~~~~~~~~l~~~~~sp~~~~~l~~~~ 2046 (2051)
T 2uv8_G 2014 LTAKPFQVTKEYFQDVYDLTGSEPIKEIIDNWE 2046 (2051)
T ss_dssp SSCSCCCCSHHHHHHHHHHHCCHHHHHHHHTTT
T ss_pred CCCceecCCHHHHHHHHHhhCCCcHHHHHHHHH
Confidence 5544332 3344332 124557888877653
No 29
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Probab=98.69 E-value=1.4e-10 Score=103.25 Aligned_cols=66 Identities=17% Similarity=0.105 Sum_probs=58.1
Q ss_pred Ceeec-------CCHHHHHhhCC-------CCeEEEEeeCCC-ceEEeCcHHHHHHHHHHHhhcCceEEEeeccCccccc
Q psy9442 1 MAAVG-------LSWEEVKARAP-------ADIVAACHNNVD-SVTISGPPAAIDKFVAELSAEGVFAKKVASSGFTGKL 65 (127)
Q Consensus 1 M~av~-------~~~~~~~~~l~-------~~v~iA~~N~p~-~~vvsG~~~~i~~~~~~l~~~g~~~~~L~v~~a~h~~ 65 (127)
|+||+ ++.+++++++. ..++|||+|||+ |+||||+.++|+++.+.|+ |+++++|++++++|+.
T Consensus 1809 MlAV~ag~~vl~Ls~EeVeelLa~~~~~~g~~VeIAn~NSP~qQvVISGd~eAIeaL~a~L~--gI~aRrL~V~~AfHSp 1886 (2006)
T 2pff_B 1809 MIAINPGRVAASFSQEALQYVVERVGKRTGWLVEIVNYNVENQQYVAAGDLRALDTVTNVLN--FIKLQKIDIIELQKSL 1886 (2006)
T ss_dssp CEEECCSSSCSSTTTTTTTTTTTTSCCCBCCBCBTTBEEECCCGGGHHHHHHHHHHHTTTCC--SCSCCSSCSSSSHHHH
T ss_pred eEEEcCCCCCCCCCHHHHHHHHHHhhccCCCEEEEEEEecCcccEEEEccHHHHHHHHHHhc--ccCccccccCcCCCCH
Confidence 88886 48899999886 149999999997 9999999999999999998 8999999999999965
Q ss_pred ccc
Q psy9442 66 DWT 68 (127)
Q Consensus 66 ~~~ 68 (127)
.|.
T Consensus 1887 ~Me 1889 (2006)
T 2pff_B 1887 SLE 1889 (2006)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
No 30
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=73.00 E-value=2.7 Score=20.90 Aligned_cols=25 Identities=16% Similarity=0.377 Sum_probs=20.9
Q ss_pred ceEEeCcHHHHHHHHHHHhhcCceE
Q psy9442 29 SVTISGPPAAIDKFVAELSAEGVFA 53 (127)
Q Consensus 29 ~~vvsG~~~~i~~~~~~l~~~g~~~ 53 (127)
.+-+.|+++.++.+.++.+..+|+.
T Consensus 7 tiwvggtpeelkklkeeakkanirv 31 (36)
T 2ki0_A 7 TIWVGGTPEELKKLKEEAKKANIRV 31 (36)
T ss_dssp CCCBCCCHHHHHHHHHHHHHHCCCC
T ss_pred EEEecCCHHHHHHHHHHHHhccEEE
Confidence 3457999999999999999887754
No 31
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=70.09 E-value=6.6 Score=37.48 Aligned_cols=87 Identities=31% Similarity=0.579 Sum_probs=56.3
Q ss_pred HHHHHHHHhhcCce-------EEEeeccCccccccccccHHHHHhhhhhccccccCcccccCceeeeeeEECchhhHHHH
Q psy9442 39 IDKFVAELSAEGVF-------AKKVASSGFTGKLDWTGNWISYIDTMLQFSILGINTRELYLPTRMQRVCIDPAKHKALV 111 (127)
Q Consensus 39 i~~~~~~l~~~g~~-------~~~L~v~~a~h~~~~~~~~~~~~d~ll~~~v~~~~~~~~~~p~~i~~~~~~pv~~~~~v 111 (127)
.+.+.+.|...|+. .+.+..+.....+.|.+.|..++|.++|..+.....+.++.|+.|.++.++|..+...+
T Consensus 989 ~~~~Y~~~~~~g~~yg~~F~~~~~~~~~~~~~~~~~~~~~~~~lD~~lq~~~~~~~~~~~~~p~~i~~~~~~~~~~~~~~ 1068 (2512)
T 2vz8_A 989 QGDVYKDLRLRGYDYGPFFQLVLESDLEGNRGRLQWNDSWVSFLDAMLHMSILAPGQLGLYLPTRFTSIRIDPVTHRQKL 1068 (2512)
T ss_dssp HHHHHHHHHHHTCCCCGGGCCEEEEETTSSEEEEEECSCHHHHHHHHHHHHHTCTTCCSCEEECBCSCCEECHHHHHHHC
T ss_pred HHHHHHHHHHhcCcCCchhcCeeeEEEcCceEEEecCCccchHHHHHHHHHHHhccCCcceecceEeEEEEecCCcccee
Confidence 45688888887752 23333344344566777888999999997665544556789999999999987665443
Q ss_pred hhhcCCCceeeEEe
Q psy9442 112 ETLSGDKKTVPVAM 125 (127)
Q Consensus 112 ~~~~~~~~~~~~~~ 125 (127)
.....+....++.+
T Consensus 1069 ~~~~~~~~~~~~~~ 1082 (2512)
T 2vz8_A 1069 YTLQDTTQAADVVV 1082 (2512)
T ss_dssp EECSSSCEEEEEEE
T ss_pred EeccCCCceeEEEE
Confidence 33223333344443
No 32
>3dhx_A Methionine import ATP-binding protein METN; methionine uptake, regulation, amino-acid transport, ATP-BIN hydrolase, inner membrane, membrane; 2.10A {Escherichia coli} SCOP: d.58.18.13
Probab=65.69 E-value=11 Score=23.53 Aligned_cols=28 Identities=14% Similarity=0.147 Sum_probs=24.4
Q ss_pred eEEeCcHHHHHHHHHHHhhcCceEEEee
Q psy9442 30 VTISGPPAAIDKFVAELSAEGVFAKKVA 57 (127)
Q Consensus 30 ~vvsG~~~~i~~~~~~l~~~g~~~~~L~ 57 (127)
+-++|+.+.+++..+.|+++|+....+.
T Consensus 69 v~l~G~~~~~~~ai~~L~~~~v~vEvl~ 96 (106)
T 3dhx_A 69 TEMHGTQQDTQAAIAWLQEHHVKVEVLG 96 (106)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEeCCHHHHHHHHHHHHHCCCEEEEee
Confidence 4569999999999999999999887764
No 33
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=62.39 E-value=13 Score=24.14 Aligned_cols=31 Identities=26% Similarity=0.360 Sum_probs=27.3
Q ss_pred eEEeCcHHHHHHHHHHHhhcCceEEEeeccC
Q psy9442 30 VTISGPPAAIDKFVAELSAEGVFAKKVASSG 60 (127)
Q Consensus 30 ~vvsG~~~~i~~~~~~l~~~g~~~~~L~v~~ 60 (127)
+|.|.+++-++++..+++.+|++...|-.+.
T Consensus 6 vvfssdpeilkeivreikrqgvrvvllysdq 36 (162)
T 2l82_A 6 VVFSSDPEILKEIVREIKRQGVRVVLLYSDQ 36 (162)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred EEecCCHHHHHHHHHHHHhCCeEEEEEecCc
Confidence 6789999999999999999999998886553
No 34
>1q5y_A NIKR, nickel responsive regulator; nickel binding, regulatory domain, beta sandwich, metal binding protein; 1.40A {Escherichia coli} SCOP: d.58.18.4 PDB: 3bkt_A 3bkf_A 3bku_A
Probab=61.84 E-value=12 Score=22.52 Aligned_cols=31 Identities=16% Similarity=0.342 Sum_probs=26.0
Q ss_pred CceEEeCcHHHHHHHHHHHhh-cCceEEEeec
Q psy9442 28 DSVTISGPPAAIDKFVAELSA-EGVFAKKVAS 58 (127)
Q Consensus 28 ~~~vvsG~~~~i~~~~~~l~~-~g~~~~~L~v 58 (127)
..+++-|+.+.|.+|..+|.. +|++.-+|.+
T Consensus 49 Evivv~G~~~~I~~l~~~l~~~kGV~~~~L~~ 80 (85)
T 1q5y_A 49 EIAVLKGDMGDVQHFADDVIAQRGVRHGHLQC 80 (85)
T ss_dssp EEEEEEEEHHHHHHHHHHHHTSTTCEEEEEEE
T ss_pred EEEEEEcCHHHHHHHHHHHhccCCeEEEeEEE
Confidence 347899999999999999998 5888777754
No 35
>2qrr_A Methionine import ATP-binding protein METN; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 1.71A {Vibrio parahaemolyticus} SCOP: d.58.18.13
Probab=58.51 E-value=17 Score=22.28 Aligned_cols=25 Identities=12% Similarity=0.078 Sum_probs=22.4
Q ss_pred EeCcHHHHHHHHHHHhhcCceEEEe
Q psy9442 32 ISGPPAAIDKFVAELSAEGVFAKKV 56 (127)
Q Consensus 32 vsG~~~~i~~~~~~l~~~g~~~~~L 56 (127)
+.|+.+.+++..+.|+++|+....+
T Consensus 73 l~G~~~~~~~ai~~L~~~~v~vEvl 97 (101)
T 2qrr_A 73 LFGNEQDDSAAIEYLRENNVKVEVL 97 (101)
T ss_dssp EESCHHHHHHHHHHHHHTTCEEEEE
T ss_pred EeCCHHHHHHHHHHHHHcCCEEEEe
Confidence 4999999999999999999988766
No 36
>2qsw_A Methionine import ATP-binding protein METN 2; ABC transporter, structural genomics, APC87322.1, PSI-2, protein structure initiative; 1.50A {Enterococcus faecalis} SCOP: d.58.18.13
Probab=56.78 E-value=17 Score=22.27 Aligned_cols=25 Identities=16% Similarity=0.105 Sum_probs=22.3
Q ss_pred EeCcHHHHHHHHHHHhhcCceEEEe
Q psy9442 32 ISGPPAAIDKFVAELSAEGVFAKKV 56 (127)
Q Consensus 32 vsG~~~~i~~~~~~l~~~g~~~~~L 56 (127)
+.|+.+.+++..+.|+++|+....+
T Consensus 73 l~G~~~~~~~ai~~L~~~~v~vEvl 97 (100)
T 2qsw_A 73 LLGEEQNILAAIEGLRKLRVETEVI 97 (100)
T ss_dssp EESCHHHHHHHHHHHHHTTCEEEES
T ss_pred EECCHHHHHHHHHHHHHcCCEEEEc
Confidence 4999999999999999999987665
No 37
>3ced_A Methionine import ATP-binding protein METN 2; ABC transporter, NIL domain, structur genomics, PSI-2, protein structure initiative; 2.15A {Staphylococcus aureus subsp} SCOP: d.58.18.13
Probab=53.70 E-value=21 Score=21.92 Aligned_cols=25 Identities=24% Similarity=0.214 Sum_probs=22.2
Q ss_pred EeC-cHHHHHHHHHHHhhcCceEEEe
Q psy9442 32 ISG-PPAAIDKFVAELSAEGVFAKKV 56 (127)
Q Consensus 32 vsG-~~~~i~~~~~~l~~~g~~~~~L 56 (127)
+.| +.+.++++.+.|+++|+....+
T Consensus 70 l~G~~~~~~~~ai~~L~~~~v~vEvl 95 (98)
T 3ced_A 70 IPYISSVDFGKFEKELIERQVKMEVL 95 (98)
T ss_dssp ESCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred EeCCCHHHHHHHHHHHHHCCCEEEEe
Confidence 489 8999999999999999987766
No 38
>2y9k_A Protein INVG; protein transport, type III secretion system, outer membrane secretin family, C15 fold; 8.30A {Salmonella enterica subsp}
Probab=48.64 E-value=32 Score=22.27 Aligned_cols=44 Identities=20% Similarity=0.275 Sum_probs=34.5
Q ss_pred cCCHHHHHhhCC------CCeEEEEeeCCCceEEeCcHHHHHHHHHHHhh
Q psy9442 5 GLSWEEVKARAP------ADIVAACHNNVDSVTISGPPAAIDKFVAELSA 48 (127)
Q Consensus 5 ~~~~~~~~~~l~------~~v~iA~~N~p~~~vvsG~~~~i~~~~~~l~~ 48 (127)
.++.+++.+.|. ++..+..+..-+...|+|++..++.+.+.++.
T Consensus 83 ~~~a~~l~~~L~~~~ll~~rg~v~~d~~tn~l~v~g~~~~v~~v~~~i~~ 132 (137)
T 2y9k_A 83 NVSLNEFNNFLKRSGLYNKNYPLRGDNRKGTFYVSGPPVYVDMVVNAATM 132 (137)
T ss_dssp SSCHHHHHHHHCCTTCCCSSSCEEECSSTTEEEEEECHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCCCCCceEECCCCCEEEEECcHHHHHHHHHHHHH
Confidence 456777777664 35678888888889999999999988887654
No 39
>1urr_A CG18505 protein; acylphosphatase, enzyme; 1.5A {Drosophila melanogaster} SCOP: d.58.10.1
Probab=44.06 E-value=20 Score=22.22 Aligned_cols=27 Identities=15% Similarity=0.127 Sum_probs=21.2
Q ss_pred eeCCCc---eEEeCcHHHHHHHHHHHhhcC
Q psy9442 24 HNNVDS---VTISGPPAAIDKFVAELSAEG 50 (127)
Q Consensus 24 ~N~p~~---~vvsG~~~~i~~~~~~l~~~g 50 (127)
.|.++- +++.|+.++|+++.+.|+..|
T Consensus 44 ~N~~dG~Vei~~eG~~~~l~~f~~~l~~~g 73 (102)
T 1urr_A 44 MNTRDGTVKGQLEAPMMNLMEMKHWLENNR 73 (102)
T ss_dssp EECTTSCEEEEEEECHHHHHHHHHHHHHCC
T ss_pred EECCCCCEEEEEEcCHHHHHHHHHHHHhcC
Confidence 344443 578999999999999998655
No 40
>2vh7_A Acylphosphatase-1; hydrolase, acetylation; 1.45A {Homo sapiens} PDB: 2w4c_A 2w4p_A 2k7k_A 2k7j_A 2acy_A
Probab=42.98 E-value=20 Score=22.11 Aligned_cols=27 Identities=19% Similarity=0.319 Sum_probs=21.1
Q ss_pred eeCCCc---eEEeCcHHHHHHHHHHHhhcC
Q psy9442 24 HNNVDS---VTISGPPAAIDKFVAELSAEG 50 (127)
Q Consensus 24 ~N~p~~---~vvsG~~~~i~~~~~~l~~~g 50 (127)
.|.++- +++.|+.++++++.+.|+..|
T Consensus 41 ~N~~dG~Vei~~eG~~~~v~~f~~~l~~~~ 70 (99)
T 2vh7_A 41 QNTDRGTVQGQLQGPISKVRHMQEWLETRG 70 (99)
T ss_dssp EECTTSCEEEEEEEEHHHHHHHHHHHHHTC
T ss_pred EECCCCCEEEEEEcCHHHHHHHHHHHHhcC
Confidence 454443 568999999999999998654
No 41
>1ulr_A Putative acylphosphatase; hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: d.58.10.1
Probab=42.09 E-value=23 Score=21.29 Aligned_cols=26 Identities=35% Similarity=0.609 Sum_probs=20.4
Q ss_pred eeCCCc---eEEeCcHHHHHHHHHHHhhcC
Q psy9442 24 HNNVDS---VTISGPPAAIDKFVAELSAEG 50 (127)
Q Consensus 24 ~N~p~~---~vvsG~~~~i~~~~~~l~~~g 50 (127)
.|.++- +.+.|+.++++++.+.|+ .|
T Consensus 35 ~N~~dG~Vei~~eG~~~~i~~f~~~l~-~g 63 (88)
T 1ulr_A 35 ENLPDGRVEVVAEGPKEALELFLHHLK-QG 63 (88)
T ss_dssp EECTTSCEEEEEESCHHHHHHHHHHHH-HC
T ss_pred EECCCCcEEEEEEeCHHHHHHHHHHHH-hC
Confidence 355444 578999999999999998 44
No 42
>3trg_A Acylphosphatase; fatty acid and phospholipid metabolism, hydrolase; 1.60A {Coxiella burnetii}
Probab=39.86 E-value=28 Score=21.43 Aligned_cols=26 Identities=15% Similarity=0.074 Sum_probs=21.4
Q ss_pred EeeCCCc---eEEeCcHHHHHHHHHHHhh
Q psy9442 23 CHNNVDS---VTISGPPAAIDKFVAELSA 48 (127)
Q Consensus 23 ~~N~p~~---~vvsG~~~~i~~~~~~l~~ 48 (127)
+.|.++- +.+.|+.++|+++.+.|+.
T Consensus 44 VrN~~dG~Vei~~eG~~~~l~~f~~~l~~ 72 (98)
T 3trg_A 44 VKNLSHGDVELVACGERDSIMILTEWLWE 72 (98)
T ss_dssp EEECTTSCEEEEEEEEHHHHHHHHHHTTT
T ss_pred EEECCCCEEEEEEEECHHHHHHHHHHHHh
Confidence 4566665 6679999999999999986
No 43
>2y3m_A Emhofq, protein transport protein HOFQ; secretin, DNA uptake, competence; 2.30A {Aggregatibacter actinomycetemcomitans}
Probab=35.45 E-value=79 Score=20.92 Aligned_cols=39 Identities=5% Similarity=0.018 Sum_probs=30.6
Q ss_pred hCCCCeEEEEeeCCCceEEeCcHHHHHHHHHHHhhcCce
Q psy9442 14 RAPADIVAACHNNVDSVTISGPPAAIDKFVAELSAEGVF 52 (127)
Q Consensus 14 ~l~~~v~iA~~N~p~~~vvsG~~~~i~~~~~~l~~~g~~ 52 (127)
++.++-.|......+.++|.|+++.++.+.+.++.....
T Consensus 131 l~~~~g~v~~d~~tN~liv~~~~~~i~~i~~li~~lD~p 169 (175)
T 2y3m_A 131 LLSPNGSITFDDRSNLLLIQDEPRSVRNIKKLIKELDKP 169 (175)
T ss_dssp SSCTTCEEEEETTTTEEEEEECHHHHHHHHHHHHHHCC-
T ss_pred ccCCCceEEEECCCCEEEEEcCHHHHHHHHHHHHHhCCC
Confidence 333345788888889999999999999999988876543
No 44
>4fk8_A Ferredoxin--NADP reductase; ssgcid, NIH, niaid, structural genomics, national institute allergy and infectious diseases; HET: FAD; 2.10A {Burkholderia thailandensis} PDB: 4f7d_A*
Probab=35.32 E-value=21 Score=25.30 Aligned_cols=36 Identities=22% Similarity=0.331 Sum_probs=27.4
Q ss_pred CCceEEeCcHHHHHHHHHHHhhcCceEEEeeccCcc
Q psy9442 27 VDSVTISGPPAAIDKFVAELSAEGVFAKKVASSGFT 62 (127)
Q Consensus 27 p~~~vvsG~~~~i~~~~~~l~~~g~~~~~L~v~~a~ 62 (127)
...+.++|+..-++++.+.|++.|+...++..++-+
T Consensus 228 ~~~v~vCGp~~m~~~v~~~l~~~gv~~~~i~~~~~~ 263 (271)
T 4fk8_A 228 QDRVMLCGSTAMLKDTTELLKKAGLVEGKNSAPGHY 263 (271)
T ss_dssp TEEEEEEECHHHHHHHHHHHHHTTCCBCBTTBCBSE
T ss_pred CCEEEEECCHHHHHHHHHHHHHcCCchhhcCCCCcE
Confidence 446788999999999999999998876666554433
No 45
>2ctf_A Vigilin; K homology type I domain, RNA-binding, cell sterol metabolism, beta-alpha-alpha-beta-BETA-alpha structure, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=35.18 E-value=59 Score=20.00 Aligned_cols=31 Identities=13% Similarity=0.322 Sum_probs=23.2
Q ss_pred CeEEEEeeCCCceEEeCcHHHHHHHHHHHhh
Q psy9442 18 DIVAACHNNVDSVTISGPPAAIDKFVAELSA 48 (127)
Q Consensus 18 ~v~iA~~N~p~~~vvsG~~~~i~~~~~~l~~ 48 (127)
++.|-.-++.+.++|.|+++.+++...+++.
T Consensus 58 ~v~I~fp~~~~~ItI~G~~~~V~~a~~~I~~ 88 (102)
T 2ctf_A 58 KVHIEFTEGEDKITLEGPTEDVSVAQEQIEG 88 (102)
T ss_dssp SSEEEECSSSCEEEEEECHHHHHHHHHHHHH
T ss_pred CcEEEeCCCCCEEEEECCHHHHHHHHHHHHH
Confidence 4555433445679999999999998888865
No 46
>4e9j_A General secretion pathway protein D; homodimer, XCPQ, periplasmic domain, structural protein, PER space, outer membrane; 2.03A {Pseudomonas aeruginosa} PDB: 4ec5_A
Probab=35.07 E-value=71 Score=22.61 Aligned_cols=56 Identities=11% Similarity=-0.099 Sum_probs=39.0
Q ss_pred CCHHHHHhhCC----CCeEEEEeeCCCceEEeCcHHHHHHHHHHHhhcCc----eEEEeeccCc
Q psy9442 6 LSWEEVKARAP----ADIVAACHNNVDSVTISGPPAAIDKFVAELSAEGV----FAKKVASSGF 61 (127)
Q Consensus 6 ~~~~~~~~~l~----~~v~iA~~N~p~~~vvsG~~~~i~~~~~~l~~~g~----~~~~L~v~~a 61 (127)
++.+++.+++. ++..+..+...+.++|+|+++.++.+.+.++.... ..+.+.+.++
T Consensus 123 ~~a~~l~~~L~~lls~~g~v~~d~~tN~Liv~g~~~~i~~i~~li~~lD~p~~~~~~vi~l~~a 186 (246)
T 4e9j_A 123 SPVSELIPLIRPLVPQYGHLAAVPSANALIISDRSANIARIEDVIRQLDQKGSHDYSVINLRYG 186 (246)
T ss_dssp SCHHHHHHHHGGGSCTTSEEEEEGGGTEEEEEECHHHHHHHHHHHHHHHTCSCCCEEEEECSSS
T ss_pred CCHHHHHHHHHHhcCCCceEEEcCCCCEEEEEcCHHHHHHHHHHHHHhccccccceEEEEecCC
Confidence 34555555443 46778888888999999999999988888876432 3444555555
No 47
>1w2i_A Acylphosphatase; hydrolase, thermophilic, stability, amyloid; 1.5A {Pyrococcus horikoshii} SCOP: d.58.10.1 PDB: 1v3z_A 2w4d_A
Probab=35.06 E-value=24 Score=21.34 Aligned_cols=26 Identities=15% Similarity=0.337 Sum_probs=20.4
Q ss_pred eeCCCc---eEEeCcHHHHHHHHHHHhhcC
Q psy9442 24 HNNVDS---VTISGPPAAIDKFVAELSAEG 50 (127)
Q Consensus 24 ~N~p~~---~vvsG~~~~i~~~~~~l~~~g 50 (127)
.|.++- +++.|+.++++++.+.|+ .|
T Consensus 37 ~N~~dG~Vei~~~G~~~~v~~f~~~l~-~g 65 (91)
T 1w2i_A 37 RNLPDGSVEAVLEGDEERVEALIGWAH-QG 65 (91)
T ss_dssp EECTTSCEEEEEEEEHHHHHHHHHHTT-TC
T ss_pred EECCCCCEEEEEEeCHHHHHHHHHHHH-hC
Confidence 454444 478999999999999998 54
No 48
>2hza_A Nickel-responsive regulator; nickel-binding, ribbon-helix-helix, transcription factor, ME binding protein; HET: 3CM; 2.10A {Escherichia coli} SCOP: a.43.1.3 d.58.18.4 PDB: 1q5v_A* 2hzv_A 3od2_A*
Probab=34.68 E-value=51 Score=21.28 Aligned_cols=31 Identities=16% Similarity=0.342 Sum_probs=25.3
Q ss_pred CceEEeCcHHHHHHHHHHHhh-cCceEEEeec
Q psy9442 28 DSVTISGPPAAIDKFVAELSA-EGVFAKKVAS 58 (127)
Q Consensus 28 ~~~vvsG~~~~i~~~~~~l~~-~g~~~~~L~v 58 (127)
..+++-|+.+.|.+|..+|.. +|++..+|.+
T Consensus 97 evivv~G~~~~I~~l~~~l~~~~GV~~~~l~~ 128 (133)
T 2hza_A 97 EIAVLKGDMGDVQHFADDVIAQRGVRHGHLQC 128 (133)
T ss_dssp EEEEEEEEHHHHHHHHHHHHHSTTEEEEEEEE
T ss_pred EEEEEEcCHHHHHHHHHHHhccCCeEEEeeEE
Confidence 347899999999999999987 5777777643
No 49
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=34.63 E-value=51 Score=20.71 Aligned_cols=89 Identities=18% Similarity=0.262 Sum_probs=57.4
Q ss_pred eEEeCcHHHHHHHHHHHhhcCceEEEeeccCc--------------------cccccccccHHHHHhhhhhcccc---cc
Q psy9442 30 VTISGPPAAIDKFVAELSAEGVFAKKVASSGF--------------------TGKLDWTGNWISYIDTMLQFSIL---GI 86 (127)
Q Consensus 30 ~vvsG~~~~i~~~~~~l~~~g~~~~~L~v~~a--------------------~h~~~~~~~~~~~~d~ll~~~v~---~~ 86 (127)
+|.|-+++.+..+.+..+..|.+.+.+..+.- -..-.|.+..+.|..+|-...++ .+
T Consensus 6 vvfstdeetlrkfkdiikkngfkvrtvrspqelkdsieelvkkynativvvvvddkewaekairfvkslgaqvliiiydq 85 (134)
T 2l69_A 6 VVFSTDEETLRKFKDIIKKNGFKVRTVRSPQELKDSIEELVKKYNATIVVVVVDDKEWAEKAIRFVKSLGAQVLIIIYDQ 85 (134)
T ss_dssp EECCCCHHHHHHHHHHHHHTTCEEEEECSHHHHHHHHHHHTTCCCCEEEEEECSSHHHHHHHHHHHHHHCCCCEEEEECS
T ss_pred EEEeCCHHHHHHHHHHHHhcCceEEEecCHHHHHHHHHHHHHHhCCeEEEEEEccHHHHHHHHHHHHhcCCeEEEEEEeC
Confidence 46788999999999999999988776654321 11124777788888876322111 11
Q ss_pred C-------cccccCceeeeeeEECchhhHHHHhhhcCCC
Q psy9442 87 N-------TRELYLPTRMQRVCIDPAKHKALVETLSGDK 118 (127)
Q Consensus 87 ~-------~~~~~~p~~i~~~~~~pv~~~~~v~~~~~~~ 118 (127)
+ .|..+--.+=.+-...|.+|.+.++.|..+-
T Consensus 86 dqnrleefsrevrrrgfevrtvtspddfkkslerlirev 124 (134)
T 2l69_A 86 DQNRLEEFSREVRRRGFEVRTVTSPDDFKKSLERLIREV 124 (134)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHhcCceEEEecChHHHHHHHHHHHHHh
Confidence 1 1122223344556788999999999987553
No 50
>2qv5_A AGR_C_5032P, uncharacterized protein ATU2773; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Agrobacterium tumefaciens str}
Probab=34.52 E-value=52 Score=24.02 Aligned_cols=48 Identities=8% Similarity=-0.005 Sum_probs=37.5
Q ss_pred ecCCHHHHHhhCC-------CCeEEEEeeCCCceEEeCcHHHHHHHHHHHhhcCceEE
Q psy9442 4 VGLSWEEVKARAP-------ADIVAACHNNVDSVTISGPPAAIDKFVAELSAEGVFAK 54 (127)
Q Consensus 4 v~~~~~~~~~~l~-------~~v~iA~~N~p~~~vvsG~~~~i~~~~~~l~~~g~~~~ 54 (127)
++++.++++..+. .-+-+-|+=|.. ++.+.+.++.+.+.|+++|.++.
T Consensus 105 ~~~s~~ei~~~l~~al~~vP~a~GvnNHmGS~---~T~~~~~M~~vm~~L~~~gL~Fl 159 (261)
T 2qv5_A 105 AGDPAKVNIDRLHRSMAKITNYTGVMNYLGGR---FLAEQSALEPVMRDIGKRGLLFL 159 (261)
T ss_dssp TTSCHHHHHHHHHHHHTTCCCCSEEEEEECTT---GGGCHHHHHHHHHHHHHTTCEEE
T ss_pred CCCCHHHHHHHHHHHHHHCCCcEEEecccccc---hhcCHHHHHHHHHHHHHCCCEEE
Confidence 4677888887764 346666666666 78999999999999999998654
No 51
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=33.91 E-value=56 Score=21.36 Aligned_cols=27 Identities=22% Similarity=0.229 Sum_probs=23.1
Q ss_pred CCceEEeCcHHHHHHHHHHHhhcCceE
Q psy9442 27 VDSVTISGPPAAIDKFVAELSAEGVFA 53 (127)
Q Consensus 27 p~~~vvsG~~~~i~~~~~~l~~~g~~~ 53 (127)
...+-++|++.-++++.+.|++.|+.+
T Consensus 113 ~~~vy~CGP~~mm~~v~~~l~~~Gv~~ 139 (158)
T 3lrx_A 113 WDLVFMVGPVGDQKQVFEVVKEYGVPM 139 (158)
T ss_dssp CSEEEEESCHHHHHHHHHHHGGGTCCE
T ss_pred CCEEEEECCHHHHHHHHHHHHHcCCCE
Confidence 346788999999999999999999863
No 52
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=33.74 E-value=58 Score=23.54 Aligned_cols=48 Identities=19% Similarity=0.176 Sum_probs=37.7
Q ss_pred ecCCHHHHHhhCC-------CCeEEEEeeCCCceEEeCcHHHHHHHHHHHhhcCceEE
Q psy9442 4 VGLSWEEVKARAP-------ADIVAACHNNVDSVTISGPPAAIDKFVAELSAEGVFAK 54 (127)
Q Consensus 4 v~~~~~~~~~~l~-------~~v~iA~~N~p~~~vvsG~~~~i~~~~~~l~~~g~~~~ 54 (127)
+++++++++..+. .-+-+-++=|.. ++.+.+.++.+.+.|+++|.++.
T Consensus 78 ~~~s~~ei~~~l~~al~~vP~a~GvnNHmGS~---~T~~~~~m~~vm~~l~~~gL~fv 132 (245)
T 2nly_A 78 SNLSVGEVKSRVRKAFDDIPYAVGLNNHMGSK---IVENEKIMRAILEVVKEKNAFII 132 (245)
T ss_dssp TTCCHHHHHHHHHHHHHHSTTCCEEEEEECTT---GGGCHHHHHHHHHHHHHTTCEEE
T ss_pred CCCCHHHHHHHHHHHHHHCCCcEEEecccccc---hhcCHHHHHHHHHHHHHCCCEEE
Confidence 4678888888775 346676666666 78899999999999999997553
No 53
>2bj7_A Nickel responsive regulator; transcription, repressor, NIKR, DNA- binding, metal-binding, transcription regulation; HET: PG4; 2.1A {Pyrococcus horikoshii} SCOP: a.43.1.3 d.58.18.4 PDB: 2bj1_A 2bj3_A* 2bj8_A* 2bj9_A*
Probab=33.49 E-value=54 Score=21.32 Aligned_cols=31 Identities=19% Similarity=0.339 Sum_probs=25.4
Q ss_pred CceEEeCcHHHHHHHHHHHhh-cCceEEEeec
Q psy9442 28 DSVTISGPPAAIDKFVAELSA-EGVFAKKVAS 58 (127)
Q Consensus 28 ~~~vvsG~~~~i~~~~~~l~~-~g~~~~~L~v 58 (127)
..+++-|+.+.|.+|..+|.. .|++..+|.+
T Consensus 99 evivv~G~~~~I~~l~~~l~~~~GV~~~~l~~ 130 (138)
T 2bj7_A 99 EVIVVKGEAKKIKMIADKLLSLKGVKHGKLVM 130 (138)
T ss_dssp EEEEEEEEHHHHHHHHHHHHTSTTEEEEEEEE
T ss_pred EEEEEEcCHHHHHHHHHHHhccCCeeEEEEEE
Confidence 347899999999999999987 5777777643
No 54
>2ctm_A Vigilin; K homology type I domain, RNA-binding, cell sterol metabolism, beta-alpha-alpha-beta-BETA-alpha structure, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=33.31 E-value=45 Score=20.25 Aligned_cols=21 Identities=19% Similarity=0.520 Sum_probs=17.0
Q ss_pred CceEEeCcHHHHHHHHHHHhh
Q psy9442 28 DSVTISGPPAAIDKFVAELSA 48 (127)
Q Consensus 28 ~~~vvsG~~~~i~~~~~~l~~ 48 (127)
+.++|+|+.+++++..+.+..
T Consensus 61 ~~V~I~G~~e~v~~A~~~I~~ 81 (95)
T 2ctm_A 61 NCVTVTGLPENVEEAIDHILN 81 (95)
T ss_dssp TEEEEESCHHHHHHHHHHHHH
T ss_pred cEEEEEcCHHHHHHHHHHHHH
Confidence 379999999998887777654
No 55
>2fhm_A Probable acylphosphatase; hydrolase; NMR {Bacillus subtilis} PDB: 2hlt_A 2hlu_A 3br8_A
Probab=31.95 E-value=37 Score=20.43 Aligned_cols=26 Identities=27% Similarity=0.500 Sum_probs=20.6
Q ss_pred eeCCCc---eEEeCcHHHHHHHHHHHhhc
Q psy9442 24 HNNVDS---VTISGPPAAIDKFVAELSAE 49 (127)
Q Consensus 24 ~N~p~~---~vvsG~~~~i~~~~~~l~~~ 49 (127)
-|.++- +++.|+.++++++.+.|+..
T Consensus 35 ~N~~dG~Vei~~eG~~~~i~~f~~~l~~~ 63 (91)
T 2fhm_A 35 KNRDDGRVEILAEGPENALQSFVEAVKNG 63 (91)
T ss_dssp EECTTSCEEEEEEECHHHHHHHHHHHHTT
T ss_pred EECCCCcEEEEEEeCHHHHHHHHHHHHhC
Confidence 455544 47899999999999999864
No 56
>2wvf_A Hpnikr, putative nickel-responsive regulator; transcription factor, transcription regulation, RHH, DNA-binding, transcription, metal-binding; 1.60A {Helicobacter pylori} PDB: 2wvc_A 3pht_A 2ca9_A 2cad_A* 2caj_A 3lgh_A 2wvd_A 2wve_A* 2wvb_A 2y3y_A* 3qsi_B
Probab=31.05 E-value=67 Score=21.25 Aligned_cols=31 Identities=19% Similarity=0.408 Sum_probs=25.7
Q ss_pred CceEEeCcHHHHHHHHHHHhh-cCceEEEeec
Q psy9442 28 DSVTISGPPAAIDKFVAELSA-EGVFAKKVAS 58 (127)
Q Consensus 28 ~~~vvsG~~~~i~~~~~~l~~-~g~~~~~L~v 58 (127)
..++|-|+.+.|.+|..+|.. +|++.-+|.+
T Consensus 109 Evivv~G~~~~I~~l~~kl~~lkGV~~~kl~~ 140 (148)
T 2wvf_A 109 ETIILQGNSFEIQRLQLEIGGLRGVKFAKLTK 140 (148)
T ss_dssp EEEEEEECHHHHHHHHHHHHTSTTEEEEEEEE
T ss_pred EEEEEEcCHHHHHHHHHHHhccCCeeEEEEEE
Confidence 347899999999999999998 5887777654
No 57
>2kxy_A Uncharacterized protein; beta strand protein, structural genomics, PSI-2, protein STR initiative; NMR {Streptococcus thermophilus}
Probab=30.70 E-value=20 Score=21.91 Aligned_cols=39 Identities=26% Similarity=0.293 Sum_probs=26.8
Q ss_pred CeEEEEee-CCCceEEeCcHHHHHHHHHHHhhcCceEEEeeccCccc
Q psy9442 18 DIVAACHN-NVDSVTISGPPAAIDKFVAELSAEGVFAKKVASSGFTG 63 (127)
Q Consensus 18 ~v~iA~~N-~p~~~vvsG~~~~i~~~~~~l~~~g~~~~~L~v~~a~h 63 (127)
+..+..+. +|.+++|+|+.+.++.+.. +. ..+++++...
T Consensus 24 gy~v~~~~~~P~~VtV~G~~~~L~~I~~------v~-~~vdls~~~~ 63 (100)
T 2kxy_A 24 NVSSISYSFDRGHVTIVGSQEAMDKIDS------IT-VPVDISQVTE 63 (100)
T ss_dssp TEEEEEEEESCCCCEEEECHHHHHHCSC------EE-EEEECTTCCS
T ss_pred CeEEEeEEEccCEEEEEECHHHhccccE------EE-EeEecccCcC
Confidence 45555444 8999999999988876543 44 5577766643
No 58
>1aps_A Acylphosphatase; hydrolase(acting on acid anhydrides); NMR {Equus caballus} SCOP: d.58.10.1
Probab=30.55 E-value=19 Score=22.13 Aligned_cols=27 Identities=22% Similarity=0.380 Sum_probs=20.9
Q ss_pred eeCCCc---eEEeCcHHHHHHHHHHHhhcC
Q psy9442 24 HNNVDS---VTISGPPAAIDKFVAELSAEG 50 (127)
Q Consensus 24 ~N~p~~---~vvsG~~~~i~~~~~~l~~~g 50 (127)
.|.++- +++.|+.++++++.+.|+..|
T Consensus 40 ~N~~dG~Vei~~eG~~~~l~~f~~~l~~~g 69 (98)
T 1aps_A 40 KNTSKGTVTGQVQGPEEKVNSMKSWLSKVG 69 (98)
T ss_dssp ECCTTCEEEEEEEEEHHHHHHHHHSSSSCC
T ss_pred EECCCCcEEEEEEeCHHHHHHHHHHHhhcC
Confidence 455543 467999999999999998654
No 59
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=30.52 E-value=45 Score=22.60 Aligned_cols=26 Identities=19% Similarity=0.417 Sum_probs=21.8
Q ss_pred CCCceEE--eCcHHHHHHHHHHHhhcC-c
Q psy9442 26 NVDSVTI--SGPPAAIDKFVAELSAEG-V 51 (127)
Q Consensus 26 ~p~~~vv--sG~~~~i~~~~~~l~~~g-~ 51 (127)
+|.++++ +|+++-+++|.+.|+..| +
T Consensus 117 ~~~~~~ie~tg~~~ki~~~~~~l~~~g~i 145 (164)
T 2f1f_A 117 TPSLYTVQLAGTSGKLDAFLASIRDVAKI 145 (164)
T ss_dssp CSSEEEEEEEECHHHHHHHHHHHTTTSEE
T ss_pred CCCEEEEEEeCCHHHHHHHHHHHHhcCCE
Confidence 4666554 999999999999999988 6
No 60
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=30.47 E-value=40 Score=25.65 Aligned_cols=23 Identities=22% Similarity=0.205 Sum_probs=20.8
Q ss_pred eCcHHHHHHHHHHHhhcCceEEE
Q psy9442 33 SGPPAAIDKFVAELSAEGVFAKK 55 (127)
Q Consensus 33 sG~~~~i~~~~~~l~~~g~~~~~ 55 (127)
-|+.+++++|++++.++||+...
T Consensus 73 ~Gt~~df~~lv~~aH~~Gi~Vil 95 (496)
T 4gqr_A 73 SGNEDEFRNMVTRCNNVGVRIYV 95 (496)
T ss_dssp TBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCHHHHHHHHHHHHHCCCEEEE
Confidence 59999999999999999998754
No 61
>1vig_A Vigilin; RNA-binding protein, ribonucleoprotein; NMR {Homo sapiens} SCOP: d.51.1.1 PDB: 1vih_A
Probab=29.37 E-value=35 Score=19.41 Aligned_cols=20 Identities=25% Similarity=0.421 Sum_probs=16.9
Q ss_pred ceEEeCcHHHHHHHHHHHhh
Q psy9442 29 SVTISGPPAAIDKFVAELSA 48 (127)
Q Consensus 29 ~~vvsG~~~~i~~~~~~l~~ 48 (127)
.++|+|+.+++++..+.+.+
T Consensus 49 ~V~I~G~~~~v~~A~~~I~~ 68 (71)
T 1vig_A 49 LIRIEGDPQGVQQAKRELLE 68 (71)
T ss_dssp EEEEEESSHHHHHHHHHHHH
T ss_pred EEEEEcCHHHHHHHHHHHHH
Confidence 79999999999888877664
No 62
>2gv1_A Probable acylphosphatase; globular alpha-helix/beta-sheet protein, hydrolase; NMR {Escherichia coli}
Probab=28.87 E-value=49 Score=19.94 Aligned_cols=20 Identities=25% Similarity=0.395 Sum_probs=17.2
Q ss_pred ceEEeCcHHHHHHHHHHH-hh
Q psy9442 29 SVTISGPPAAIDKFVAEL-SA 48 (127)
Q Consensus 29 ~~vvsG~~~~i~~~~~~l-~~ 48 (127)
.+++.|+.++++++.+.| +.
T Consensus 45 ei~~eG~~~~i~~f~~~l~~~ 65 (92)
T 2gv1_A 45 EVVACGEEGQVEKLMQWLKSG 65 (92)
T ss_dssp EEEECSCHHHHHHHHHHHHHT
T ss_pred EEEEEeCHHHHHHHHHHhhcc
Confidence 357899999999999999 54
No 63
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=28.15 E-value=1.4e+02 Score=21.05 Aligned_cols=45 Identities=7% Similarity=0.027 Sum_probs=32.6
Q ss_pred CCHHHHHh-hCCC-------CeEEEEeeCCCceEEeCc---HHHHHHHHHHHhhcCceE
Q psy9442 6 LSWEEVKA-RAPA-------DIVAACHNNVDSVTISGP---PAAIDKFVAELSAEGVFA 53 (127)
Q Consensus 6 ~~~~~~~~-~l~~-------~v~iA~~N~p~~~vvsG~---~~~i~~~~~~l~~~g~~~ 53 (127)
++.+++++ .+.. +..+...+.|.. +|. .+.++++.+.+++.|+..
T Consensus 121 ~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~---tG~~~~~~~l~~i~~~~~~~~~~l 176 (356)
T 1v72_A 121 LDIVRLRERTREKVGDVHTTQPACVSITQATE---VGSIYTLDEIEAIGDVCKSSSLGL 176 (356)
T ss_dssp CCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT---TSCCCCHHHHHHHHHHHHHTTCEE
T ss_pred EcHHHHHHHhhhcchhhccCCceEEEEEcCCC---CCccCCHHHHHHHHHHHHHcCCeE
Confidence 46788888 7753 345555565642 677 899999999999998754
No 64
>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}
Probab=28.06 E-value=68 Score=18.91 Aligned_cols=22 Identities=23% Similarity=0.442 Sum_probs=17.6
Q ss_pred CcHHHHHHHHHHHhhcCceEEE
Q psy9442 34 GPPAAIDKFVAELSAEGVFAKK 55 (127)
Q Consensus 34 G~~~~i~~~~~~l~~~g~~~~~ 55 (127)
.+.++++++.++|++.|+....
T Consensus 80 ~d~~~v~~~~~~l~~~G~~~~~ 101 (127)
T 3e5d_A 80 GTKEAVDELTEKLRQDGFAIAG 101 (127)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEE
T ss_pred CCHHHHHHHHHHHHHcCCeEec
Confidence 3566799999999999987654
No 65
>3gr5_A ESCC; secretin, type III secretion system, outer membrane, transport, membrane protein; 2.05A {Escherichia coli}
Probab=27.31 E-value=1.1e+02 Score=20.34 Aligned_cols=44 Identities=11% Similarity=0.127 Sum_probs=33.2
Q ss_pred cCCHHHHHhhCC------CC-eEEEEeeCCCceEEeCcHHHHHHHHHHHhh
Q psy9442 5 GLSWEEVKARAP------AD-IVAACHNNVDSVTISGPPAAIDKFVAELSA 48 (127)
Q Consensus 5 ~~~~~~~~~~l~------~~-v~iA~~N~p~~~vvsG~~~~i~~~~~~l~~ 48 (127)
.++.+++.+.|. ++ +.+.....-+.+.|+|++..++.+.+.++.
T Consensus 98 ~a~a~~l~~~L~~~~ll~~r~~~v~~d~~tn~l~Vsg~p~~v~~v~~~i~~ 148 (156)
T 3gr5_A 98 YLDIDSLLKYLSDTISVNKNSCNVRKITTFNSIEVRGVPECIKYITSLSES 148 (156)
T ss_dssp SSCHHHHHHHHTTSSCCEETTEEEEECSSTTCEEEEECHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhcCCccCCCCeEEEeCCCCEEEEEcCHHHHHHHHHHHHH
Confidence 356677777664 23 378888888899999999999888887764
No 66
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=26.94 E-value=62 Score=20.75 Aligned_cols=25 Identities=24% Similarity=0.291 Sum_probs=20.8
Q ss_pred CceEEeCcHHHHHHHHHHHhhcCce
Q psy9442 28 DSVTISGPPAAIDKFVAELSAEGVF 52 (127)
Q Consensus 28 ~~~vvsG~~~~i~~~~~~l~~~g~~ 52 (127)
..+-++|++.-++++.+.+++.|++
T Consensus 109 ~~vy~CGP~~Mm~av~~~l~~~~~~ 133 (142)
T 3lyu_A 109 DLVFMVGPVGDQKQVFEVVKEYGVP 133 (142)
T ss_dssp SEEEEESCHHHHHHHHHHHHHHTCC
T ss_pred CEEEEECCHHHHHHHHHHHHHcCCc
Confidence 4567899999999999999988874
No 67
>2hh2_A KH-type splicing regulatory protein; KH-RNA binding domain, RNA binding protein; NMR {Homo sapiens}
Probab=26.27 E-value=90 Score=19.17 Aligned_cols=22 Identities=23% Similarity=0.341 Sum_probs=18.3
Q ss_pred CceEEeCcHHHHHHHHHHHhhc
Q psy9442 28 DSVTISGPPAAIDKFVAELSAE 49 (127)
Q Consensus 28 ~~~vvsG~~~~i~~~~~~l~~~ 49 (127)
+.++|+|+.+++++....+++.
T Consensus 55 r~V~I~G~~e~v~~A~~~I~~~ 76 (107)
T 2hh2_A 55 KLFIIRGSPQQIDHAKQLIEEK 76 (107)
T ss_dssp EEEEEESCHHHHHHHHHHHHHH
T ss_pred eEEEEECCHHHHHHHHHHHHHH
Confidence 5699999999999888777663
No 68
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=25.94 E-value=37 Score=23.10 Aligned_cols=26 Identities=19% Similarity=0.382 Sum_probs=21.5
Q ss_pred CCCceEE--eCcHHHHHHHHHHHhhcCc
Q psy9442 26 NVDSVTI--SGPPAAIDKFVAELSAEGV 51 (127)
Q Consensus 26 ~p~~~vv--sG~~~~i~~~~~~l~~~g~ 51 (127)
+|.++++ +|+++-+++|.+.|+..|+
T Consensus 118 ~~~~~~ie~tg~~~ki~~~~~~l~~~gi 145 (165)
T 2pc6_A 118 TNELYTIELTGTRSKLDGFLQAVDCNLI 145 (165)
T ss_dssp ETTEEEEEEEECHHHHHHHHHHSCGGGE
T ss_pred cCCEEEEEEcCCHHHHHHHHHHhhhcCC
Confidence 3566554 9999999999999999886
No 69
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=24.76 E-value=44 Score=21.43 Aligned_cols=50 Identities=16% Similarity=0.149 Sum_probs=34.2
Q ss_pred CCHHHHHhhCCCCeEEEEeeCCCceEEeCcHHHH---HHHHHHHhhcCceEEEeeccCcc
Q psy9442 6 LSWEEVKARAPADIVAACHNNVDSVTISGPPAAI---DKFVAELSAEGVFAKKVASSGFT 62 (127)
Q Consensus 6 ~~~~~~~~~l~~~v~iA~~N~p~~~vvsG~~~~i---~~~~~~l~~~g~~~~~L~v~~a~ 62 (127)
++.++++.++....++- ++=+|..... .++.+.|+++|+....++.+.|.
T Consensus 49 l~~~~l~~ll~~~~evl-------iiGtG~~~~~~~~~~~~~~l~~~gI~ve~m~T~~A~ 101 (122)
T 2ab1_A 49 VQPADVKEVVEKGVQTL-------VIGRGMSEALKVPSSTVEYLKKHGIDVRVLQTEQAV 101 (122)
T ss_dssp CCHHHHHHHHTTCCSEE-------EEEECSSCCSCCCHHHHHHHHHTTCEEEEECHHHHH
T ss_pred CCHHHHHHHhhCCCCEE-------EECCCCCCccCCCHHHHHHHHHcCCEEEEeCHHHHH
Confidence 67788888877443331 1125555543 67788999999999999887764
No 70
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=24.51 E-value=45 Score=23.37 Aligned_cols=26 Identities=19% Similarity=0.436 Sum_probs=21.4
Q ss_pred CCCceEE--eCcHHHHHHHHHHHhhcCc
Q psy9442 26 NVDSVTI--SGPPAAIDKFVAELSAEGV 51 (127)
Q Consensus 26 ~p~~~vv--sG~~~~i~~~~~~l~~~g~ 51 (127)
+|.++++ +|+++-+++|.+.|+..|+
T Consensus 144 ~~~s~~iE~tG~~~ki~a~i~~l~~~gi 171 (193)
T 2fgc_A 144 SREGAIIEITGARSKVEAFINLLPQKQV 171 (193)
T ss_dssp CSSEEEEEEEECHHHHHHHHHHSCGGGE
T ss_pred cCCEEEEEEcCCHHHHHHHHHHhhhhCC
Confidence 4666554 9999999999999998886
No 71
>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*
Probab=24.14 E-value=74 Score=19.40 Aligned_cols=20 Identities=35% Similarity=0.350 Sum_probs=16.3
Q ss_pred cHHHHHHHHHHHhhcCceEE
Q psy9442 35 PPAAIDKFVAELSAEGVFAK 54 (127)
Q Consensus 35 ~~~~i~~~~~~l~~~g~~~~ 54 (127)
+.++++++.++|++.|+...
T Consensus 81 ~~~dv~~~~~~l~~~G~~~~ 100 (138)
T 2a4x_A 81 DTASVDKKYAELVDAGYEGH 100 (138)
T ss_dssp SHHHHHHHHHHHHHTTCCEE
T ss_pred CHHHHHHHHHHHHHCCCcee
Confidence 46699999999999998654
No 72
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=23.93 E-value=1.2e+02 Score=22.21 Aligned_cols=47 Identities=13% Similarity=0.082 Sum_probs=33.2
Q ss_pred CCHHHHHhhCCCC---eEEEEeeCCCceEEeCcHHHHHHHHHHHhhcCceEE
Q psy9442 6 LSWEEVKARAPAD---IVAACHNNVDSVTISGPPAAIDKFVAELSAEGVFAK 54 (127)
Q Consensus 6 ~~~~~~~~~l~~~---v~iA~~N~p~~~vvsG~~~~i~~~~~~l~~~g~~~~ 54 (127)
++.+++++.+..+ +.+.+.|.|.-.+. +.+.++++.+.+++.|+...
T Consensus 162 ~d~~~l~~~~~~~~~~v~~~~p~nptG~~~--~~~~l~~i~~~~~~~~~~li 211 (422)
T 3fvs_A 162 LDPMELAGKFTSRTKALVLNTPNNPLGKVF--SREELELVASLCQQHDVVCI 211 (422)
T ss_dssp CCHHHHHTTCCTTEEEEEEESSCTTTCCCC--CHHHHHHHHHHHHHHTCEEE
T ss_pred CCHHHHHhhcCCCceEEEECCCCCCCCcCC--CHHHHHHHHHHHHHcCcEEE
Confidence 5788888888644 44444555555544 67789999999999887543
No 73
>2bjd_A Acylphosphatase; hyperthermophIle, hydrolase; 1.27A {Sulfolobus solfataricus} PDB: 2bje_A 1y9o_A
Probab=23.73 E-value=53 Score=20.26 Aligned_cols=27 Identities=22% Similarity=0.322 Sum_probs=20.7
Q ss_pred EeeCCCc---eEEeCcHHHHHHHHHHHhhc
Q psy9442 23 CHNNVDS---VTISGPPAAIDKFVAELSAE 49 (127)
Q Consensus 23 ~~N~p~~---~vvsG~~~~i~~~~~~l~~~ 49 (127)
+.|.++- +++.|+.++|+++.+.|+..
T Consensus 46 V~N~~dG~Vei~~eG~~~~i~~f~~~l~~g 75 (101)
T 2bjd_A 46 AKNLPDGSVEVVAEGYEEALSKLLERIKQG 75 (101)
T ss_dssp EEECTTSCEEEEEEEEHHHHHHHHHHHTTC
T ss_pred EEECCCCcEEEEEEeCHHHHHHHHHHHHhC
Confidence 3455544 47899999999999999853
No 74
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=23.71 E-value=1.2e+02 Score=22.14 Aligned_cols=47 Identities=6% Similarity=0.046 Sum_probs=32.6
Q ss_pred CCHHHHHhhCCCC---eEEEEeeCCCceEEeCcHHHHHHHHHHHhhcCceEE
Q psy9442 6 LSWEEVKARAPAD---IVAACHNNVDSVTISGPPAAIDKFVAELSAEGVFAK 54 (127)
Q Consensus 6 ~~~~~~~~~l~~~---v~iA~~N~p~~~vvsG~~~~i~~~~~~l~~~g~~~~ 54 (127)
++.+++++.+..+ +.+.+.|.|.-.++ +.+.++++.+.+++.|+...
T Consensus 155 ~d~~~l~~~~~~~~~~v~~~~p~nptG~~~--~~~~l~~l~~~~~~~~~~li 204 (410)
T 3e2y_A 155 FDPRELESKFSSKTKAIILNTPHNPLGKVY--TRQELQVIADLCVKHDTLCI 204 (410)
T ss_dssp CCHHHHHTTCCTTEEEEEEESSCTTTCCCC--CHHHHHHHHHHHHHHTCEEE
T ss_pred CCHHHHHhhcCCCceEEEEeCCCCCCCcCc--CHHHHHHHHHHHHHcCcEEE
Confidence 5778888888643 44444555554444 55789999999999887543
No 75
>3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0
Probab=23.56 E-value=62 Score=22.00 Aligned_cols=38 Identities=11% Similarity=0.100 Sum_probs=29.1
Q ss_pred CceEEeCcHHHHH--------HHHHHHhhcCceEEEeeccCccccc
Q psy9442 28 DSVTISGPPAAID--------KFVAELSAEGVFAKKVASSGFTGKL 65 (127)
Q Consensus 28 ~~~vvsG~~~~i~--------~~~~~l~~~g~~~~~L~v~~a~h~~ 65 (127)
.-.++.|+.+.+- ++.+.|++.|+.++...++++-|..
T Consensus 217 p~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~~ 262 (282)
T 3fcx_A 217 DILIDQGKDDQFLLDGQLLPDNFIAACTEKKIPVVFRLQEDYDHSY 262 (282)
T ss_dssp CEEEEEETTCHHHHTTSSCHHHHHHHHHHTTCCEEEEEETTCCSSH
T ss_pred cEEEEcCCCCcccccchhhHHHHHHHHHHcCCceEEEECCCCCcCH
Confidence 3467788877664 7789999999987777778877753
No 76
>2lxf_A Uncharacterized protein; beaver fever, giardiasis, seattle structural genomics center infectious disease, ssgcid, structural genomics; NMR {Giardia lamblia}
Probab=22.57 E-value=96 Score=19.91 Aligned_cols=25 Identities=40% Similarity=0.585 Sum_probs=20.1
Q ss_pred eeCCC---ceEEeCcHHHHHHHHHHHhh
Q psy9442 24 HNNVD---SVTISGPPAAIDKFVAELSA 48 (127)
Q Consensus 24 ~N~p~---~~vvsG~~~~i~~~~~~l~~ 48 (127)
-|.++ .+++-|+.++|++|.+.|+.
T Consensus 67 rN~~dG~Vei~~eG~~~~v~~f~~~l~~ 94 (121)
T 2lxf_A 67 TNNEDGSVSGVVQGPKEQVDAFVKYLHK 94 (121)
T ss_dssp EECTTSCEEEEEEEEHHHHHHHHHHHHH
T ss_pred EECCCCCEEEEEEECHHHHHHHHHHHHh
Confidence 45443 47789999999999999974
No 77
>2b7e_A PRE-mRNA processing protein PRP40; structural protein; NMR {Saccharomyces cerevisiae} SCOP: a.159.2.1
Probab=22.57 E-value=58 Score=18.38 Aligned_cols=18 Identities=28% Similarity=0.409 Sum_probs=15.2
Q ss_pred CcHHHHHHHHHHHhhcCc
Q psy9442 34 GPPAAIDKFVAELSAEGV 51 (127)
Q Consensus 34 G~~~~i~~~~~~l~~~g~ 51 (127)
|..++.++|.+-|++.++
T Consensus 1 ~~eEae~aF~~lL~~~~V 18 (59)
T 2b7e_A 1 GAMEAEKEFITMLKENQV 18 (59)
T ss_dssp CTTHHHHHHHHHHHHTTC
T ss_pred ChhHHHHHHHHHHHHcCC
Confidence 677889999999998865
No 78
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2
Probab=22.56 E-value=73 Score=22.07 Aligned_cols=32 Identities=22% Similarity=0.387 Sum_probs=23.8
Q ss_pred CCceEEeCcHHHHHHHHHHHhhcCceEEEeec
Q psy9442 27 VDSVTISGPPAAIDKFVAELSAEGVFAKKVAS 58 (127)
Q Consensus 27 p~~~vvsG~~~~i~~~~~~l~~~g~~~~~L~v 58 (127)
...+-++|+..-++.+.+.|++.|+...++..
T Consensus 210 ~~~vyvCGp~~m~~~v~~~l~~~G~~~~~i~~ 241 (250)
T 1tvc_A 210 NPDIYLCGPPGMIDAACELVRSRGIPGEQVFF 241 (250)
T ss_dssp SSEEEEESSHHHHHHHHHHHHHHCCCCSEEEE
T ss_pred CcEEEEeCCHHHHHHHHHHHHHcCCCHHHEEE
Confidence 34577899998888888888888875544443
No 79
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=21.76 E-value=1.8e+02 Score=21.19 Aligned_cols=47 Identities=13% Similarity=0.169 Sum_probs=31.2
Q ss_pred CCHHHHHhhCCCC---eEEEEeeCCCceEEeCcHHHHHHHHHHHhhcCceEE
Q psy9442 6 LSWEEVKARAPAD---IVAACHNNVDSVTISGPPAAIDKFVAELSAEGVFAK 54 (127)
Q Consensus 6 ~~~~~~~~~l~~~---v~iA~~N~p~~~vvsG~~~~i~~~~~~l~~~g~~~~ 54 (127)
++.+++++.+..+ +.+.+-|.|.-.+. +.+.++++.+.+++.|+...
T Consensus 152 ~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~--~~~~l~~i~~~~~~~~~~li 201 (385)
T 1b5p_A 152 PDPERVRRAITPRTKALVVNSPNNPTGAVY--PKEVLEALARLAVEHDFYLV 201 (385)
T ss_dssp CCHHHHHTTCCTTEEEEEEESSCTTTCCCC--CHHHHHHHHHHHHHTTCEEE
T ss_pred CCHHHHHHhcCCCCEEEEEeCCCCCCCCCc--CHHHHHHHHHHHHHcCCEEE
Confidence 5678888877643 34444445554444 46889999999998886443
No 80
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=20.92 E-value=1.1e+02 Score=22.01 Aligned_cols=47 Identities=9% Similarity=0.065 Sum_probs=33.3
Q ss_pred CCHHHHHhhCCC---CeEEEEeeCCCceEEeCcHHHHHHHHHHHhhcCceEE
Q psy9442 6 LSWEEVKARAPA---DIVAACHNNVDSVTISGPPAAIDKFVAELSAEGVFAK 54 (127)
Q Consensus 6 ~~~~~~~~~l~~---~v~iA~~N~p~~~vvsG~~~~i~~~~~~l~~~g~~~~ 54 (127)
++.+++++.+.+ -+.+...|.|.-++. +.+.++++.+.+++.|+...
T Consensus 144 ~d~~~l~~~l~~~~~~v~i~~p~nptG~~~--~~~~l~~l~~~~~~~~~~li 193 (383)
T 3kax_A 144 IDFEHLEKQFQQGVKLMLLCSPHNPIGRVW--KKEELTKLGSLCTKYNVIVV 193 (383)
T ss_dssp CCHHHHHHHHTTTCCEEEEESSBTTTTBCC--CHHHHHHHHHHHHHHTCEEE
T ss_pred EcHHHHHHHhCcCCeEEEEeCCCCCCCcCc--CHHHHHHHHHHHHHCCCEEE
Confidence 577888887753 255555666665544 67889999999998887543
No 81
>1zzk_A Heterogeneous nuclear ribonucleoprotein K; KH domian, alpha-beta fold, DNA binding protein; 0.95A {Homo sapiens} SCOP: d.51.1.1 PDB: 1zzj_A 1zzi_A
Probab=20.60 E-value=84 Score=18.17 Aligned_cols=21 Identities=24% Similarity=0.253 Sum_probs=16.6
Q ss_pred CceEEeCcHHHHHHHHHHHhh
Q psy9442 28 DSVTISGPPAAIDKFVAELSA 48 (127)
Q Consensus 28 ~~~vvsG~~~~i~~~~~~l~~ 48 (127)
+.++|+|+.++++.....+.+
T Consensus 52 ~~v~I~G~~~~v~~A~~~I~~ 72 (82)
T 1zzk_A 52 RIITITGTQDQIQNAQYLLQN 72 (82)
T ss_dssp EEEEEEECHHHHHHHHHHHHH
T ss_pred eEEEEEeCHHHHHHHHHHHHH
Confidence 469999999999887766554
No 82
>2ctk_A Vigilin; K homology type I domain, RNA-binding, cell sterol metabolism, beta-alpha-alpha-beta-BETA-alpha structure, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=20.54 E-value=91 Score=19.13 Aligned_cols=21 Identities=33% Similarity=0.453 Sum_probs=16.8
Q ss_pred CceEEeCcHHHHHHHHHHHhh
Q psy9442 28 DSVTISGPPAAIDKFVAELSA 48 (127)
Q Consensus 28 ~~~vvsG~~~~i~~~~~~l~~ 48 (127)
+.++|+|+.++++...+.+..
T Consensus 60 ~~V~I~G~~e~v~~A~~~I~~ 80 (104)
T 2ctk_A 60 DIIAITGLAANLDRAKAGLLE 80 (104)
T ss_dssp CEEEEEECHHHHHHHHHHHHH
T ss_pred ceEEEEcCHHHHHHHHHHHHH
Confidence 379999999988887776654
No 83
>2bgi_A Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxin)-NADP(H) reductase, flavoproteins, electron transfer, oxidoreductase; HET: FAD HTG; 1.68A {Rhodobacter capsulatus} PDB: 2bgj_A* 2vnh_A* 2vni_A* 2vnj_A* 2vnk_A*
Probab=20.45 E-value=58 Score=23.03 Aligned_cols=32 Identities=16% Similarity=0.127 Sum_probs=22.6
Q ss_pred CceEEeCcHHHHHHHHHHHhhcCceEEEeecc
Q psy9442 28 DSVTISGPPAAIDKFVAELSAEGVFAKKVASS 59 (127)
Q Consensus 28 ~~~vvsG~~~~i~~~~~~l~~~g~~~~~L~v~ 59 (127)
..+-++|+..-++++.+.|++.|+...++.+.
T Consensus 227 ~~vyvCGp~~m~~~v~~~l~~~G~~~~~i~~~ 258 (272)
T 2bgi_A 227 DRAMVCGSLAFNVDVMKVLESYGLREGANSEP 258 (272)
T ss_dssp EEEEEEECHHHHHHHHHHHHTTTCCBCBTTBC
T ss_pred cEEEEECCHHHHHHHHHHHHHcCCChHHcCCc
Confidence 35677888888888888888878755444443
No 84
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=20.29 E-value=81 Score=24.21 Aligned_cols=23 Identities=30% Similarity=0.208 Sum_probs=20.5
Q ss_pred eCcHHHHHHHHHHHhhcCceEEE
Q psy9442 33 SGPPAAIDKFVAELSAEGVFAKK 55 (127)
Q Consensus 33 sG~~~~i~~~~~~l~~~g~~~~~ 55 (127)
-|+.+++++|++++.++|++...
T Consensus 61 ~Gt~~dfk~Lv~~aH~~Gi~Vil 83 (448)
T 1g94_A 61 GGNRAQFIDMVNRCSAAGVDIYV 83 (448)
T ss_dssp TBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCHHHHHHHHHHHHHCCCEEEE
Confidence 48999999999999999998753
No 85
>1dtj_A RNA-binding neurooncological ventral antigen 2; KH domain, alpha-beta fold RNA-binding motif, immune system; 2.00A {Homo sapiens} SCOP: d.51.1.1 PDB: 1dt4_A
Probab=20.26 E-value=65 Score=18.19 Aligned_cols=21 Identities=38% Similarity=0.417 Sum_probs=16.8
Q ss_pred CceEEeCcHHHHHHHHHHHhh
Q psy9442 28 DSVTISGPPAAIDKFVAELSA 48 (127)
Q Consensus 28 ~~~vvsG~~~~i~~~~~~l~~ 48 (127)
+.++|+|+.++++.....+.+
T Consensus 51 ~~v~I~G~~~~v~~A~~~I~~ 71 (76)
T 1dtj_A 51 RRVTITGSPAATQAAQYLISQ 71 (76)
T ss_dssp EEEEEEESHHHHHHHHHHHHH
T ss_pred eEEEEEeCHHHHHHHHHHHHH
Confidence 579999999999887776654
No 86
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=20.19 E-value=2.5e+02 Score=21.35 Aligned_cols=48 Identities=15% Similarity=0.105 Sum_probs=33.3
Q ss_pred CCHHHHHhhCCCCeEEEEeeC-CC-ceEEeCcHHHHHHHHHHHhh--cCceE
Q psy9442 6 LSWEEVKARAPADIVAACHNN-VD-SVTISGPPAAIDKFVAELSA--EGVFA 53 (127)
Q Consensus 6 ~~~~~~~~~l~~~v~iA~~N~-p~-~~vvsG~~~~i~~~~~~l~~--~g~~~ 53 (127)
.+.+++++.+.++..+...++ |+ -+-..|+.+.++++.+.+++ .|+..
T Consensus 153 ~d~e~l~~~l~~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~l 204 (431)
T 3ht4_A 153 VDFEAVAAAIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVV 204 (431)
T ss_dssp BCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEE
T ss_pred cCHHHHHhhcCCCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEE
Confidence 477888888875544444443 22 12248899999999999999 77644
No 87
>1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32
Probab=20.09 E-value=1.7e+02 Score=19.76 Aligned_cols=33 Identities=6% Similarity=-0.158 Sum_probs=24.9
Q ss_pred HHHHHHHHHHhhcCceEEEeeccCccccccccc
Q psy9442 37 AAIDKFVAELSAEGVFAKKVASSGFTGKLDWTG 69 (127)
Q Consensus 37 ~~i~~~~~~l~~~g~~~~~L~v~~a~h~~~~~~ 69 (127)
+..+.+.+.+++.|..++..-++++-|...|..
T Consensus 229 ~~~~~~~~~l~~~~~~~~~~~~~~~gH~~~~~~ 261 (273)
T 1vkh_A 229 RQTNCLISCLQDYQLSFKLYLDDLGLHNDVYKN 261 (273)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCCSGGGGGGC
T ss_pred HHHHHHHHHHHhcCCceEEEEeCCCcccccccC
Confidence 466778888998888777777788888765554
No 88
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=20.07 E-value=77 Score=24.20 Aligned_cols=23 Identities=9% Similarity=0.231 Sum_probs=20.5
Q ss_pred eCcHHHHHHHHHHHhhcCceEEE
Q psy9442 33 SGPPAAIDKFVAELSAEGVFAKK 55 (127)
Q Consensus 33 sG~~~~i~~~~~~l~~~g~~~~~ 55 (127)
-|+.++++++++++.++|++...
T Consensus 66 ~Gt~~df~~lv~~aH~~Gi~Vil 88 (441)
T 1lwj_A 66 YGSEREFKEMIEAFHDSGIKVVL 88 (441)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCCHHHHHHHHHHHHHCCCEEEE
Confidence 48999999999999999998753
Done!