BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9444
(395 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P12276|FAS_CHICK Fatty acid synthase OS=Gallus gallus GN=FASN PE=1 SV=5
Length = 2512
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 48/71 (67%)
Query: 304 RPVWYVFSGMGSQWAGMVKGLLHIPVFDQSIRKSAEALRGENFDLIPVITSEDADTFEHI 363
RP+WY+ SGMG+QW GM L+ + +F QSI +S EAL+ + ++ + D +TF+
Sbjct: 489 RPLWYICSGMGTQWKGMGLSLMKLDLFRQSILRSDEALKSTGLKVSDLLLNADENTFDDT 548
Query: 364 LNSFVSIAAVQ 374
+++FV +AA+Q
Sbjct: 549 VHAFVGLAAIQ 559
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 10/86 (11%)
Query: 195 SEPMLSVDLTVHSNAPENFNGL-------IESIDRAG-RPSIQCGHFTGRKEVACAYADG 246
S+ +L+ D + F GL I+ + AG +P GH G E+AC YAD
Sbjct: 534 SDLLLNADENTFDDTVHAFVGLAAIQIAQIDVLKAAGLQPDGILGHSVG--ELACGYADN 591
Query: 247 TLTAEQTILCAYWRGRSILECKLAPG 272
+L+ E+ +L AYWRGR + E KL PG
Sbjct: 592 SLSHEEAVLAAYWRGRCVKEAKLPPG 617
>sp|P12785|FAS_RAT Fatty acid synthase OS=Rattus norvegicus GN=Fasn PE=1 SV=3
Length = 2505
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%)
Query: 303 KRPVWYVFSGMGSQWAGMVKGLLHIPVFDQSIRKSAEALRGENFDLIPVITSEDADTFEH 362
+RP+W++ SGMG+QW GM L+ + F +SI +S EAL+ + ++ S D TF+
Sbjct: 489 QRPLWFICSGMGTQWRGMGLSLMRLDSFRESILRSDEALKPLGVKVSDLLLSTDEHTFDD 548
Query: 363 ILNSFVSIAAVQ 374
I++SFVS+ A+Q
Sbjct: 549 IVHSFVSLTAIQ 560
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 225 RPSIQCGHFTGRKEVACAYADGTLTAEQTILCAYWRGRSILECKLAPG 272
+P GH G EVAC YADG L+ + +L AYWRG+ I + L G
Sbjct: 573 KPDGIIGHSLG--EVACGYADGCLSQREAVLAAYWRGQCIKDANLPAG 618
>sp|P19096|FAS_MOUSE Fatty acid synthase OS=Mus musculus GN=Fasn PE=1 SV=2
Length = 2504
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 48/72 (66%)
Query: 303 KRPVWYVFSGMGSQWAGMVKGLLHIPVFDQSIRKSAEALRGENFDLIPVITSEDADTFEH 362
KRP+W++ SGMG+QW GM L+ + F +SI +S EA++ + ++ S D TF+
Sbjct: 489 KRPLWFICSGMGTQWRGMGLSLMRLDSFRESILRSDEAVKPLGVKVSDLLLSTDERTFDD 548
Query: 363 ILNSFVSIAAVQ 374
I+++FVS+ A+Q
Sbjct: 549 IVHAFVSLTAIQ 560
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 216 LIESIDRAG-RPSIQCGHFTGRKEVACAYADGTLTAEQTILCAYWRGRSILECKLAPG 272
LI+ + G +P GH G EVAC YADG L+ + +L AYWRG+ I + L PG
Sbjct: 563 LIDLLTSVGLKPDGIIGHSLG--EVACGYADGCLSQREAVLAAYWRGQCIKDAHLPPG 618
>sp|P49327|FAS_HUMAN Fatty acid synthase OS=Homo sapiens GN=FASN PE=1 SV=3
Length = 2511
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 47/72 (65%)
Query: 303 KRPVWYVFSGMGSQWAGMVKGLLHIPVFDQSIRKSAEALRGENFDLIPVITSEDADTFEH 362
+RP+W++ SGMG+QW GM L+ + F SI +S EA++ + ++ S D TF+
Sbjct: 489 ERPLWFICSGMGTQWRGMGLSLMRLDRFRDSILRSDEAVKPFGLKVSQLLLSTDESTFDD 548
Query: 363 ILNSFVSIAAVQ 374
I++SFVS+ A+Q
Sbjct: 549 IVHSFVSLTAIQ 560
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 215 GLIESIDRAG-RPSIQCGHFTGRKEVACAYADGTLTAEQTILCAYWRGRSILECKLAPG 272
GLI+ + G RP GH G EVAC YADG L+ E+ +L AYWRG+ I E L PG
Sbjct: 562 GLIDLLSCMGLRPDGIVGHSLG--EVACGYADGCLSQEEAVLAAYWRGQCIKEAHLPPG 618
>sp|Q71SP7|FAS_BOVIN Fatty acid synthase OS=Bos taurus GN=FASN PE=2 SV=1
Length = 2513
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 303 KRPVWYVFSGMGSQWAGMVKGLLHIPVFDQSIRKSAEALRGENFDLIPVITSEDADTFEH 362
KRP+W++ SGMG+QW GM L+ + F SI +S EA++ + ++ S D F+
Sbjct: 489 KRPLWFICSGMGTQWRGMGLSLMRLSRFRDSILRSDEAVKPLGLQVSQLLLSTDEAIFDD 548
Query: 363 ILNSFVSIAAVQ 374
++ SFVS+ A+Q
Sbjct: 549 MVISFVSLTAIQ 560
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Query: 231 GHFTGRKEVACAYADGTLTAEQTILCAYWRGRSILECKLAPG 272
GH G EVAC YADG ++ E+ IL AYWRG+ I E + PG
Sbjct: 579 GHSLG--EVACGYADGCISQEEAILSAYWRGQCIKEANIPPG 618
>sp|Q03133|ERYA3_SACER Erythronolide synthase, modules 5 and 6 OS=Saccharopolyspora
erythraea GN=eryA PE=1 SV=4
Length = 3172
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 306 VWYVFSGMGSQWAGMVKGLLHIPVFDQSI 334
V +VF G G+QW GM +GLL +PVF +SI
Sbjct: 2021 VVFVFPGQGAQWEGMARGLLSVPVFAESI 2049
Score = 33.5 bits (75), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 296 GMDFNGEKRPVWYVFSGMGSQWAGMVKGLLH-IPVFDQSIRKSAEAL 341
G N +R V VF G G+QW GM + LL VF SIR AL
Sbjct: 545 GQGPNSPRR-VAMVFPGQGAQWQGMARDLLRESQVFADSIRDCERAL 590
>sp|Q03131|ERYA1_SACER Erythronolide synthase, modules 1 and 2 OS=Saccharopolyspora
erythraea GN=eryA PE=1 SV=1
Length = 3491
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 308 YVFSGMGSQWAGMVKGLLHI-PVFDQSIRKSAEALRGE-NFDLIPVITSEDA 357
+VF G G QWAGM LL PVF ++R+ A+AL +F++IP + +E A
Sbjct: 1032 FVFPGQGWQWAGMAVDLLDTSPVFAAALRECADALEPHLDFEVIPFLRAEAA 1083
Score = 39.7 bits (91), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 20/27 (74%)
Query: 308 YVFSGMGSQWAGMVKGLLHIPVFDQSI 334
+VF G G+QW GM + LL +PVF +SI
Sbjct: 2509 FVFPGQGAQWEGMARELLPVPVFAESI 2535
>sp|Q02251|MCAS_MYCBO Mycocerosic acid synthase OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=mas PE=1 SV=2
Length = 2111
Score = 39.7 bits (91), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 300 NGEKRPVWYVFSGMGSQWAGMVKGLLHI-PVFDQSIRKSAEALRGEN-FDLIPVITSE 355
+G++ PVW VFSG GSQWA M LL PVF +I K + E+ F + IT++
Sbjct: 528 HGDRGPVW-VFSGQGSQWAAMGTQLLASEPVFAATIAKLEPVIAAESGFSVTEAITAQ 584
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/21 (66%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Query: 277 NGEKRPVWYVFSGMGSQWAGM 297
+G++ PVW VFSG GSQWA M
Sbjct: 528 HGDRGPVW-VFSGQGSQWAAM 547
>sp|P22367|MSAS_PENPA 6-methylsalicylic acid synthase OS=Penicillium patulum PE=1 SV=1
Length = 1774
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 306 VWYVFSGMGSQWAGMVKGLLHIPVFDQSIRKSAEALRGE 344
VW VFSG G+QW M K L+H PVF +I+ E ++ E
Sbjct: 567 VW-VFSGHGAQWPDMGKQLIHNPVFFAAIQPLDELIQAE 604
>sp|Q4WAZ9|NRP14_ASPFU Nonribosomal peptide synthetase 14 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=NRPS14 PE=2 SV=2
Length = 4007
Score = 36.2 bits (82), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 290 MGSQWAGMDFNGEKRP-VWYVFSGMGSQWAGMVKGLL-HIPVFDQSIRKSAEAL 341
+G++ + +F+ +RP + VF+G G+QWAGM +GL+ +F Q I EA+
Sbjct: 555 IGTRSSVPEFDHVRRPKILGVFTGQGAQWAGMGQGLMAKSALFRQVIEVMEEAM 608
>sp|Q07017|OL56_STRAT Oleandomycin polyketide synthase, modules 5 and 6 OS=Streptomyces
antibioticus GN=orfB PE=3 SV=1
Length = 3519
Score = 35.8 bits (81), Expect = 0.56, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 301 GEKRPVWYVFSGMGSQWAGMVKGLLH-IPVFDQSIRKSAEALRG-ENFDLIPVITSEDA 357
E R V +VF G GSQW GM GLL PVF +++ + A L + L+ V+ DA
Sbjct: 564 AEGRRVVFVFPGQGSQWVGMAAGLLDACPVFAEAVAECAAVLDPVTGWSLVEVLQGRDA 622
Score = 35.8 bits (81), Expect = 0.56, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 301 GEKRPVWYVFSGMGSQWAGMVKGLLH-IPVFDQSIRKSAEALRG-ENFDLIPVITSEDA 357
E R V +VF G GSQW GM GLL PVF +++ + A L + L+ V+ DA
Sbjct: 2215 AEGRRVVFVFPGQGSQWVGMAAGLLDACPVFAEAVAECAAVLDPVTGWSLVEVLQGRDA 2273
>sp|Q03132|ERYA2_SACER Erythronolide synthase, modules 3 and 4 OS=Saccharopolyspora
erythraea GN=eryA PE=1 SV=3
Length = 3567
Score = 35.8 bits (81), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query: 303 KRPVWYVFSGMGSQWAGMVKGLLHIP-VFDQSIRKSAEAL 341
++PV VF G G+QW GM + LL VF +S+ + AEAL
Sbjct: 2011 RKPV-LVFPGQGAQWVGMARDLLESSEVFAESMSRCAEAL 2049
Score = 35.4 bits (80), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 302 EKRPVWYVFSGMGSQWAGMVKGLL-HIPVFDQSIRKSAEAL 341
+ R V ++F G GSQWAGM LL PVF IR E++
Sbjct: 555 DGRNVVFLFPGQGSQWAGMGAELLSSSPVFAGKIRACDESM 595
>sp|Q21P94|URE1_SACD2 Urease subunit alpha OS=Saccharophagus degradans (strain 2-40 /
ATCC 43961 / DSM 17024) GN=ureC PE=3 SV=1
Length = 568
Score = 32.7 bits (73), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 11/87 (12%)
Query: 147 IDVKRALTILSQLVLENSAGALK--LKIAEIASDKTAETAFANTLIPILESEPMLSVDLT 204
I V++ TI + V ++ + ++ SDKT +T N LI L+ ++ D+
Sbjct: 30 IQVEKDFTIYGEEVKFGGGKVIRDGMGQSQATSDKTPDTVITNALI--LDHWGIVKADVA 87
Query: 205 VHSNAPENFNGLIESIDRAGRPSIQCG 231
+ NG I +I +AG P IQ G
Sbjct: 88 IK-------NGRISAIGKAGNPDIQPG 107
>sp|P30143|YAAJ_ECOLI Uncharacterized transporter YaaJ OS=Escherichia coli (strain K12)
GN=yaaJ PE=3 SV=1
Length = 476
Score = 32.7 bits (73), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Query: 263 SILECKLAP--GRNDFNGEKR--PVWYVFSGMGSQWAGMDF 299
S EC LA D NG+ R P WY+ G+G +W G+ F
Sbjct: 106 SFAECSLAQLYKERDVNGQFRGGPAWYMARGLGMRWMGVLF 146
Score = 32.3 bits (72), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 13/104 (12%)
Query: 298 DFNGEKR--PVWYVFSGMGSQWAGMVKG---LLHIPVFDQSIRKSAEA-LRGENFDLIPV 351
D NG+ R P WY+ G+G +W G++ L+ + ++ +A A +FD P+
Sbjct: 120 DVNGQFRGGPAWYMARGLGMRWMGVLFAVFLLIAYGIIFSGVQANAVARALSFSFDFPPL 179
Query: 352 ITSEDADTFEHILNSFVSIAAVQDSDTFEHILNSFVSIAAVQFV 395
+T IL F +A + ++ FV + A+ +V
Sbjct: 180 VTGI-------ILAVFTLLAITRGLHGVARLMQGFVPLMAIIWV 216
>sp|Q55445|Y041_SYNY3 Putative methyl-accepting chemotaxis protein sll0041
OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=sll0041 PE=3 SV=2
Length = 1000
Score = 32.3 bits (72), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 15/123 (12%)
Query: 108 ANTLIPILESEPMLSVDLTVHSNAPENFNGLIESIEKKAIDVKRALTILSQLVLENSAGA 167
AN + PI +L + + + P +++ + ID+ LT+ L LE S
Sbjct: 604 ANLVAPINYKGNLLGLLIAHQCSGPRDWH-------QNEIDLFGQLTVQVGLALERSDLL 656
Query: 168 LKLKIAEIASDKTAETAFANTLIPILESEPMLSVDLTVHSNAPEN--------FNGLIES 219
+ KIAE+ + E L ++E +P+ DLT+ ++ E+ +N IES
Sbjct: 657 AQQKIAEVEQRQMREKMQKRALELLMEVDPVSRGDLTIRAHVTEDEIGTIADSYNATIES 716
Query: 220 IDR 222
+ R
Sbjct: 717 LRR 719
Score = 32.0 bits (71), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 8/110 (7%)
Query: 69 IDVKRALTILSQLVLENSAGALKLKIAEIASDKTAETAFANTLIPILESEPMLSVDLTVH 128
ID+ LT+ L LE S + KIAE+ + E L ++E +P+ DLT+
Sbjct: 636 IDLFGQLTVQVGLALERSDLLAQQKIAEVEQRQMREKMQKRALELLMEVDPVSRGDLTIR 695
Query: 129 SNAPEN--------FNGLIESIEKKAIDVKRALTILSQLVLENSAGALKL 170
++ E+ +N IES+ + V+ A + ++ N +L
Sbjct: 696 AHVTEDEIGTIADSYNATIESLRRIVTQVQTAASQFTETTDTNEVAVRQL 745
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 136,392,619
Number of Sequences: 539616
Number of extensions: 5648030
Number of successful extensions: 14408
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 14354
Number of HSP's gapped (non-prelim): 70
length of query: 395
length of database: 191,569,459
effective HSP length: 120
effective length of query: 275
effective length of database: 126,815,539
effective search space: 34874273225
effective search space used: 34874273225
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)