BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9446
(174 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 89 TYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGGHILAPAKTKC 138
TY+QL++L LD+ IKETLRL P + I+ R + V G+ + P C
Sbjct: 305 TYDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTVAGYTIPPGHQVC 354
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 88 PTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGGHILAPAKTKCQLK--AITP 145
PTY+ + +++YLD V+ ETLRLFP L R +KD + G + P + A+
Sbjct: 323 PTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEING-MFIPKGVVVMIPSYALHR 381
Query: 146 DPRADCETNEKHRPRLNTGKGEEKEENY 173
DP+ E EK P + K ++ + Y
Sbjct: 382 DPKYWTEP-EKFLPERFSKKNKDNIDPY 408
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 88 PTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGGHILAPAKTKCQLK--AITP 145
PTY+ + +++YLD V+ ETLRLFP L R +KD + G + P + A+
Sbjct: 325 PTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEING-MFIPKGVVVMIPSYALHR 383
Query: 146 DPRADCETNEKHRPRLNTGKGEEKEENY 173
DP+ E EK P + K ++ + Y
Sbjct: 384 DPKYWTEP-EKFLPERFSKKNKDNIDPY 410
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 88 PTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGGHILAPAKTKCQLK--AITP 145
PTY+ + +++YLD V+ ETLRLFP L R +KD + G + P + A+
Sbjct: 324 PTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEING-MFIPKGVVVMIPSYALHR 382
Query: 146 DPRADCETNEKHRPRLNTGKGEEKEENY 173
DP+ E EK P + K ++ + Y
Sbjct: 383 DPKYWTEP-EKFLPERFSKKNKDNIDPY 409
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 28/42 (66%)
Query: 87 CPTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGG 128
P+Y+Q+++LKY+ V+ E LRL+P VP ++D +GG
Sbjct: 305 VPSYKQVKQLKYVGMVLNEALRLWPTVPAFSLYAKEDTVLGG 346
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 87 CPTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGG 128
P+Y+Q+++LKY+ V+ E LRL+P P ++D +GG
Sbjct: 305 VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG 346
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 87 CPTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGG 128
P+Y+Q+++LKY+ V+ E LRL+P P ++D +GG
Sbjct: 303 VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG 344
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 87 CPTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGG 128
P+Y+Q+++LKY+ V+ E LRL+P P ++D +GG
Sbjct: 302 VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG 343
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 87 CPTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGG 128
P+Y+Q+++LKY+ V+ E LRL+P P ++D +GG
Sbjct: 303 VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG 344
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 87 CPTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGG 128
P+Y+Q+++LKY+ V+ E LRL+P P ++D +GG
Sbjct: 302 VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG 343
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 87 CPTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGG 128
P+Y+Q+++LKY+ V+ E LRL+P P ++D +GG
Sbjct: 302 VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG 343
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 87 CPTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGG 128
P+Y+Q+++LKY+ V+ E LRL+P P ++D +GG
Sbjct: 302 VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG 343
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 87 CPTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGG 128
P+Y+Q+++LKY+ V+ E LRL+P P ++D +GG
Sbjct: 308 VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG 349
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 87 CPTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGG 128
P+Y+Q+++LKY+ V+ E LRL+P P ++D +GG
Sbjct: 302 VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG 343
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 87 CPTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGG 128
P+Y+Q+++LKY+ V+ E LRL+P P ++D +GG
Sbjct: 302 VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG 343
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 87 CPTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGG 128
P+Y+Q+++LKY+ V+ E LRL+P P ++D +GG
Sbjct: 302 VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG 343
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 87 CPTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGG 128
P+Y+Q+++LKY+ V+ E LRL+P P ++D +GG
Sbjct: 303 VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG 344
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 87 CPTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGG 128
P+Y+Q+++LKY+ V+ E LRL+P P ++D +GG
Sbjct: 302 VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG 343
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 87 CPTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGG 128
P+Y+Q+++LKY+ V+ E LRL+P P ++D +GG
Sbjct: 302 VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG 343
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 87 CPTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGG 128
P+Y+Q+++LKY+ V+ E LRL+P P ++D +GG
Sbjct: 302 VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG 343
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 87 CPTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGG 128
P+Y+Q+++LKY+ V+ E LRL+P P ++D +GG
Sbjct: 302 VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG 343
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 87 CPTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGG 128
P+Y+Q+++LKY+ V+ E LRL+P P ++D +GG
Sbjct: 302 VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG 343
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 87 CPTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGG 128
P+Y+Q+++LKY+ V+ E LRL+P P ++D +GG
Sbjct: 302 VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG 343
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 87 CPTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGG 128
P+Y+Q+++LKY+ V+ E LRL+P P ++D +GG
Sbjct: 302 VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG 343
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 87 CPTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGG 128
P+Y+Q+++LKY+ V+ E LRL+P P ++D +GG
Sbjct: 302 VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG 343
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 87 CPTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGG 128
P+Y+Q+++LKY+ V+ E LRL+P P ++D +GG
Sbjct: 303 VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG 344
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 87 CPTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGG 128
P+Y+Q+++LKY+ V+ E LRL+P P ++D +GG
Sbjct: 302 VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG 343
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 87 CPTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGG 128
P+Y+Q+++LKY+ V+ E LRL+P P ++D +GG
Sbjct: 302 VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG 343
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 87 CPTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGG 128
P+Y+Q+++LKY+ V+ E LRL+P P ++D +GG
Sbjct: 302 VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG 343
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 87 CPTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGG 128
P+Y+Q+++LKY+ V+ E LRL+P P ++D +GG
Sbjct: 302 VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG 343
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 87 CPTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGG 128
P+Y+Q+++LKY+ V+ E LRL+P P ++D +GG
Sbjct: 302 VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG 343
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 87 CPTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGG 128
P+Y+Q+++LKY+ V+ E LRL+P P ++D +GG
Sbjct: 302 VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG 343
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 87 CPTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGG 128
P+Y+Q+++LKY+ V+ E LRL+P P ++D +GG
Sbjct: 302 VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG 343
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 87 CPTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGG 128
P+Y+Q+++LKY+ V+ E LRL+P P ++D +GG
Sbjct: 302 VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG 343
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 87 CPTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGG 128
P+Y+Q+++LKY+ V+ E LRL+P P ++D +GG
Sbjct: 302 VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG 343
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 87 CPTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGG 128
P+Y+Q+++LKY+ V+ E LRL+P P ++D +GG
Sbjct: 302 VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG 343
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 87 CPTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGG 128
P+Y+Q+++LKY+ V+ E LRL+P P ++D +GG
Sbjct: 302 VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG 343
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 87 CPTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGG 128
P+Y+Q+++LKY+ V+ E LRL+P P ++D +GG
Sbjct: 302 VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG 343
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 87 CPTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGG 128
P+Y+Q+++LKY+ V+ E LRL+P P ++D +GG
Sbjct: 302 VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG 343
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 87 CPTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGG 128
P+Y+Q+++LKY+ V+ E LRL+P P ++D +GG
Sbjct: 305 VPSYKQVKQLKYVGMVLNEALRLWPTSPAFSLYAKEDTVLGG 346
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 87 CPTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGG 128
P+Y+Q+++LKY+ V+ E LR++P P ++D +GG
Sbjct: 303 VPSYKQVKQLKYVGMVLNEALRIWPTAPAFSLYAKEDTMLGG 344
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 87 CPTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGG 128
P+Y+Q+++LKY+ V+ E LRL+P P ++D +GG
Sbjct: 303 VPSYKQVKQLKYVGMVLNEALRLWPTAPPFSLYAKEDTVLGG 344
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 87 CPTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGG 128
P+Y+Q+++LKY+ V+ E LRL+P P ++D +GG
Sbjct: 303 VPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGG 344
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 87 CPTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGG 128
P+Y+Q+++LKY+ V+ E LRL+P P ++D +GG
Sbjct: 302 VPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGG 343
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 68 LLQVIQETLAVFGPEGLTQCPTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVG 127
LLQ +Q L P+ Q P E L+ + YL +KE++RL P+VP R ++K +G
Sbjct: 320 LLQEVQSVL----PDN--QTPRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVLG 373
Query: 128 GHIL 131
+ L
Sbjct: 374 EYAL 377
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 87 CPTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGG 128
P+++Q+++LKY+ V+ E LRL+P P ++D +GG
Sbjct: 303 VPSHKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG 344
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 33.5 bits (75), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 89 TYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGGH-ILAPAKTKCQLKAITPDP 147
+E +++L++ VI E +RL PAV +L R + +GG+ I A A AI DP
Sbjct: 314 AFEDVRKLRHTGNVIVEAMRLRPAVWVLTRRAVAESELGGYRIPAGADIIYSPYAIQRDP 373
Query: 148 RA 149
++
Sbjct: 374 KS 375
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 33.5 bits (75), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 12/99 (12%)
Query: 61 TSTITIILLQVIQETLAVFGPE-----GLTQCPTYEQLQELKYLDKVIKETLRLFPAVPI 115
T++ T+I L ++ A E G + ++ L+++ L+ V+KETLRL P + I
Sbjct: 264 TASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLII 323
Query: 116 LGRNIEKDENVGGHILAPAKTKCQLKAIT-------PDP 147
L R + + V GH + AI+ PDP
Sbjct: 324 LMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDP 362
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 33.5 bits (75), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 12/99 (12%)
Query: 61 TSTITIILLQVIQETLAVFGPE-----GLTQCPTYEQLQELKYLDKVIKETLRLFPAVPI 115
T++ T+I L ++ A E G + ++ L+++ L+ V+KETLRL P + I
Sbjct: 264 TASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLII 323
Query: 116 LGRNIEKDENVGGHILAPAKTKCQLKAIT-------PDP 147
L R + + V GH + AI+ PDP
Sbjct: 324 LMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDP 362
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 33.5 bits (75), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 12/99 (12%)
Query: 61 TSTITIILLQVIQETLAVFGPE-----GLTQCPTYEQLQELKYLDKVIKETLRLFPAVPI 115
T++ T+I L ++ A E G + ++ L+++ L+ V+KETLRL P + I
Sbjct: 264 TASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLII 323
Query: 116 LGRNIEKDENVGGHILAPAKTKCQLKAIT-------PDP 147
L R + + V GH + AI+ PDP
Sbjct: 324 LMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDP 362
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 33.5 bits (75), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 12/99 (12%)
Query: 61 TSTITIILLQVIQETLAVFGPE-----GLTQCPTYEQLQELKYLDKVIKETLRLFPAVPI 115
T++ T+I L ++ A E G + ++ L+++ L+ V+KETLRL P + I
Sbjct: 264 TASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLII 323
Query: 116 LGRNIEKDENVGGHILAPAKTKCQLKAIT-------PDP 147
L R + + V GH + AI+ PDP
Sbjct: 324 LMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDP 362
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 32.0 bits (71), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 84 LTQCPTYEQLQELKYLDKVIKETLRLFPAV 113
L+Q T E L+++ YLD+V++E LRL P V
Sbjct: 289 LSQELTAETLKKMPYLDQVLQEVLRLIPPV 318
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 90 YEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGGHILAPAKT 136
+E L L+YL +V+KE+LRL+P R +E++ + G + P T
Sbjct: 296 FEDLGRLQYLSQVLKESLRLYPPAWGTFRLLEEETLIDG-VRVPGNT 341
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 30.0 bits (66), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 93 LQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGG-HILAPAKTKCQLKAITPDPRA 149
L + + + I ETLR P V ++ R + +D VGG I C + A DP A
Sbjct: 296 LADRSLVPRAIAETLRYKPPVQLIPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEA 353
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 29.6 bits (65), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 91 EQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGGHILAPAKTKCQ--LKAITPDP 147
+ LQ + L IKETLRL P L R E D + +++ PAKT Q + A+ DP
Sbjct: 330 KMLQMVPLLKASIKETLRLHPISVTLQRYPESDLVLQDYLI-PAKTLVQVAIYAMGRDP 387
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 83 GLTQCPTYEQLQELKYLDKVIKETLRLFPAVPIL 116
G ++ PT L L+ I+E LRL P P+L
Sbjct: 319 GFSRTPTISDRNRLLLLEATIREVLRLRPVAPML 352
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 4/95 (4%)
Query: 83 GLTQCPTYEQLQELKYLDKVIKETLRLFPAVPI-LGRNIEKDENVGGHILAPAKTKC--Q 139
G + P +E ++ Y++ VI E R +P+ L R ++KD L P T+
Sbjct: 314 GKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFL-PKGTEVYPM 372
Query: 140 LKAITPDPRADCETNEKHRPRLNTGKGEEKEENYF 174
L ++ DP + + KG+ K+ + F
Sbjct: 373 LGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAF 407
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 4/95 (4%)
Query: 83 GLTQCPTYEQLQELKYLDKVIKETLRLFPAVPI-LGRNIEKDENVGGHILAPAKTKC--Q 139
G + P +E ++ Y++ VI E R +P+ L R ++KD L P T+
Sbjct: 314 GKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMGLARRVKKDTKFRDFFL-PKGTEVYPM 372
Query: 140 LKAITPDPRADCETNEKHRPRLNTGKGEEKEENYF 174
L ++ DP + + KG+ K+ + F
Sbjct: 373 LGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAF 407
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 4/95 (4%)
Query: 83 GLTQCPTYEQLQELKYLDKVIKETLRLFPAVPI-LGRNIEKDENVGGHILAPAKTKC--Q 139
G + P +E ++ Y++ VI E R +P+ L R ++KD L P T+
Sbjct: 314 GKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFL-PKGTEVYPM 372
Query: 140 LKAITPDPRADCETNEKHRPRLNTGKGEEKEENYF 174
L ++ DP + + KG+ K+ + F
Sbjct: 373 LGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAF 407
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 4/95 (4%)
Query: 83 GLTQCPTYEQLQELKYLDKVIKETLRLFPAVPI-LGRNIEKDENVGGHILAPAKTKC--Q 139
G + P +E ++ Y++ VI E R +P+ L R ++KD L P T+
Sbjct: 314 GKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFL-PKGTEVYPM 372
Query: 140 LKAITPDPRADCETNEKHRPRLNTGKGEEKEENYF 174
L ++ DP + + KG+ K+ + F
Sbjct: 373 LGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAF 407
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 4/95 (4%)
Query: 83 GLTQCPTYEQLQELKYLDKVIKETLRLFPAVPI-LGRNIEKDENVGGHILAPAKTKC--Q 139
G + P +E ++ Y++ VI E R +P+ L R ++KD L P T+
Sbjct: 314 GKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFL-PKGTEVYPM 372
Query: 140 LKAITPDPRADCETNEKHRPRLNTGKGEEKEENYF 174
L ++ DP + + KG+ K+ + F
Sbjct: 373 LGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAF 407
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 28.1 bits (61), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 93 LQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGGHILAPAKTKCQL 140
LQ + L IKETLRL P L R + D + +++ PAKT Q+
Sbjct: 331 LQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMI-PAKTLVQV 377
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 93 LQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGGHILAPAKTKCQL 140
LQ + L IKETLRL P L R + D + +++ PAKT Q+
Sbjct: 328 LQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMI-PAKTLVQV 374
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 27.3 bits (59), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 82 EGLTQCPTYEQLQELKYLDKVIKETLRLFPA 112
EG C + +L +L LD +IKE+LRL A
Sbjct: 312 EGNPICLSQAELNDLPVLDSIIKESLRLSSA 342
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 27.3 bits (59), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 82 EGLTQCPTYEQLQELKYLDKVIKETLRLFPA 112
EG C + +L +L LD +IKE+LRL A
Sbjct: 312 EGNPICLSQAELNDLPVLDSIIKESLRLSSA 342
>pdb|3Q5P|A Chain A, Crystal Structure Of Bmrr Bound To Tetracycline
Length = 278
Score = 26.9 bits (58), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 123 DENVGGHILAPAKTKCQLKAITPD 146
DE HI P T Q+ +ITPD
Sbjct: 183 DEMTYRHIFTPVLTNKQISSITPD 206
>pdb|3Q1M|A Chain A, Crystal Structure Of Bmrr Dimer Bound To Dna And The
Ligand 4-Amino- Quinaldine
pdb|3Q2Y|A Chain A, Crystal Structure Of Bmrr Bound To Ethidium
pdb|3Q3D|A Chain A, Crystal Structure Of Bmrr Bound To Puromycin
pdb|3Q5S|A Chain A, Crystal Structure Of Bmrr Bound To Acetylcholine
pdb|3Q5R|A Chain A, Crystal Structure Of Bmrr Bound To Kanamycin
Length = 284
Score = 26.9 bits (58), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 123 DENVGGHILAPAKTKCQLKAITPD 146
DE HI P T Q+ +ITPD
Sbjct: 183 DEMTYRHIFTPVLTNKQISSITPD 206
>pdb|1EXI|A Chain A, Crystal Structure Of Transcription Activator Bmrr, From B.
Subtilis, Bound To 21 Base Pair Bmr Operator And Tpsb
pdb|1EXJ|A Chain A, Crystal Structure Of Transcription Activator Bmrr, From B.
Subtilis, Bound To 21 Base Pair Bmr Operator And Tpp
pdb|1R8E|A Chain A, Crystal Structure Of Bmrr Bound To Dna At 2.4a Resolution
Length = 278
Score = 26.9 bits (58), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 123 DENVGGHILAPAKTKCQLKAITPD 146
DE HI P T Q+ +ITPD
Sbjct: 183 DEMTYRHIFTPVLTNKQISSITPD 206
>pdb|3D71|A Chain A, Crystal Structure Of E253q Bmrr Bound To 22 Base Pair
Promoter Site
Length = 284
Score = 26.9 bits (58), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 123 DENVGGHILAPAKTKCQLKAITPD 146
DE HI P T Q+ +ITPD
Sbjct: 183 DEMTYRHIFTPVLTNKQISSITPD 206
>pdb|3D6Y|A Chain A, Crystal Structure Of R275e Mutant Of Bmrr Bound To Dna And
Berberine
pdb|3D6Z|A Chain A, Crystal Structure Of R275e Mutant Of Bmrr Bound To Dna And
Rhodamine
Length = 284
Score = 26.9 bits (58), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 123 DENVGGHILAPAKTKCQLKAITPD 146
DE HI P T Q+ +ITPD
Sbjct: 183 DEMTYRHIFTPVLTNKQISSITPD 206
>pdb|3IAO|A Chain A, Conformational Plasticity Of The Coiled Coil Domain Of
Bmrr Required For Bmr Promoter Binding-The Unliganded
Structure
Length = 278
Score = 26.9 bits (58), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 123 DENVGGHILAPAKTKCQLKAITPD 146
DE HI P T Q+ +ITPD
Sbjct: 183 DEMTYRHIFTPVLTNKQISSITPD 206
>pdb|3D70|A Chain A, Crystal Structure Of E253a Mutant Of Bmrr Bound To 22-Bp
Oligonucleotide
Length = 284
Score = 26.9 bits (58), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 123 DENVGGHILAPAKTKCQLKAITPD 146
DE HI P T Q+ +ITPD
Sbjct: 183 DEMTYRHIFTPVLTNKQISSITPD 206
>pdb|1BOW|A Chain A, Multidrug-Binding Domain Of Transcription Activator Bmrr
(Apo Form)
pdb|2BOW|A Chain A, Multidrug-Binding Domain Of Transcription Activator Bmrr
In Complex With A Ligand, Tetraphenylphosphonium
Length = 159
Score = 26.9 bits (58), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Query: 69 LQVIQETLAVFGPEGLTQCPTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGG 128
+++IQ GPE + +Y +L+ K+++ T + A DE
Sbjct: 13 IRIIQTEAEGIGPENVLNA-SYSKLK--KFIESADGFTNNSYGATFSFQPYTSIDEMTYR 69
Query: 129 HILAPAKTKCQLKAITPD 146
HI P T Q+ +ITPD
Sbjct: 70 HIFTPVLTNKQISSITPD 87
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 26.6 bits (57), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 79 FGPEGLTQCPTYEQLQELKYLDKVIKETLRLFPAVPI 115
GP TY+ L L+ I E LRL P VP+
Sbjct: 324 LGPGASCSRVTYKDRARLPLLNATIAEVLRLRPVVPL 360
>pdb|2H31|A Chain A, Crystal Structure Of Human Paics, A Bifunctional
Carboxylase And Synthetase In Purine Biosynthesis
Length = 425
Score = 26.6 bits (57), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 30 FETSPKPGSENLDSRNQ----SSGVRSHIQNGAVLTSTITIILLQVIQET 75
+E PG L S++Q ++ ++H++ A +++ IT + Q++QE
Sbjct: 22 YELLDSPGKVLLQSKDQITAGNAARKNHLEGKAAISNKITSCIFQLLQEA 71
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 26.2 bits (56), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 73 QETLAVFGPEGLTQCPTYEQLQELKYLDKVIKETLRLFPAVP 114
+E V GP ++ P + QE+ Y+D V+ E R VP
Sbjct: 306 EEIDRVIGP---SRIPAIKDRQEMPYMDAVVHEIQRFITLVP 344
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.133 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,276,264
Number of Sequences: 62578
Number of extensions: 202965
Number of successful extensions: 372
Number of sequences better than 100.0: 78
Number of HSP's better than 100.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 313
Number of HSP's gapped (non-prelim): 78
length of query: 174
length of database: 14,973,337
effective HSP length: 92
effective length of query: 82
effective length of database: 9,216,161
effective search space: 755725202
effective search space used: 755725202
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 48 (23.1 bits)