RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy9446
(174 letters)
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus
megaterium [TaxId: 1404]}
Length = 453
Score = 31.2 bits (69), Expect = 0.063
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 88 PTYEQLQELKYLDKVIKETLRLFPAVPILGRNIEKDENVGGH--ILAPAKTKCQLKAITP 145
P+Y+Q+++LKY+ V+ E LRL+P P ++D +GG + + + +
Sbjct: 301 PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 360
Query: 146 DPRADCETNEKHRP 159
D + E+ RP
Sbjct: 361 DKTIWGDDVEEFRP 374
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.315 0.133 0.382
Gapped
Lambda K H
0.267 0.0401 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 612,563
Number of extensions: 26026
Number of successful extensions: 29
Number of sequences better than 10.0: 1
Number of HSP's gapped: 29
Number of HSP's successfully gapped: 2
Length of query: 174
Length of database: 2,407,596
Length adjustment: 79
Effective length of query: 95
Effective length of database: 1,322,926
Effective search space: 125677970
Effective search space used: 125677970
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 50 (23.9 bits)