Query psy9448
Match_columns 583
No_of_seqs 490 out of 3024
Neff 7.9
Searched_HMMs 29240
Date Fri Aug 16 19:36:13 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9448.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9448hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1x88_A Kinesin-like protein KI 100.0 1.1E-83 3.7E-88 671.9 15.5 305 13-318 54-359 (359)
2 2y65_A Kinesin, kinesin heavy 100.0 6.9E-83 2.4E-87 665.8 12.8 309 14-338 51-361 (365)
3 3b6u_A Kinesin-like protein KI 100.0 4.8E-83 1.6E-87 667.1 11.3 305 13-329 67-372 (372)
4 2wbe_C Bipolar kinesin KRP-130 100.0 6.7E-83 2.3E-87 668.4 11.1 306 13-320 66-372 (373)
5 3bfn_A Kinesin-like protein KI 100.0 2.8E-82 9.5E-87 663.1 13.9 294 14-324 65-362 (388)
6 3cob_A Kinesin heavy chain-lik 100.0 5.6E-82 1.9E-86 659.1 12.7 307 14-348 47-355 (369)
7 2vvg_A Kinesin-2; motor protei 100.0 1.1E-81 3.9E-86 653.1 14.1 291 13-320 55-346 (350)
8 1t5c_A CENP-E protein, centrom 100.0 1.4E-81 4.9E-86 652.9 13.3 293 14-321 44-340 (349)
9 1goj_A Kinesin, kinesin heavy 100.0 5.9E-81 2E-85 649.6 10.3 294 14-321 47-342 (355)
10 2zfi_A Kinesin-like protein KI 100.0 1.2E-79 4E-84 643.1 12.0 293 13-317 47-362 (366)
11 1bg2_A Kinesin; motor protein, 100.0 2.3E-79 7.7E-84 631.1 13.9 280 15-309 45-325 (325)
12 2owm_A Nckin3-434, related to 100.0 1.1E-79 3.7E-84 656.2 11.7 289 14-317 96-421 (443)
13 3lre_A Kinesin-like protein KI 100.0 5.3E-79 1.8E-83 635.6 14.2 280 14-309 72-355 (355)
14 4a14_A Kinesin, kinesin-like p 100.0 1E-78 3.6E-83 632.0 14.9 287 14-307 50-344 (344)
15 3nwn_A Kinesin-like protein KI 100.0 1.9E-78 6.4E-83 631.0 15.7 284 13-309 71-359 (359)
16 2h58_A Kinesin-like protein KI 100.0 1.1E-78 3.6E-83 627.4 13.3 281 14-310 48-329 (330)
17 2nr8_A Kinesin-like protein KI 100.0 6.1E-78 2.1E-82 627.0 15.5 284 13-309 70-358 (358)
18 1f9v_A Kinesin-like protein KA 100.0 4.3E-78 1.5E-82 626.9 13.8 283 14-314 52-346 (347)
19 3t0q_A AGR253WP; kinesin, alph 100.0 7.2E-78 2.5E-82 626.3 13.4 282 14-313 53-348 (349)
20 2rep_A Kinesin-like protein KI 100.0 9.8E-78 3.3E-82 628.6 14.5 285 14-309 83-376 (376)
21 3gbj_A KIF13B protein; kinesin 100.0 8.8E-78 3E-82 626.2 11.9 283 14-309 51-350 (354)
22 1ry6_A Internal kinesin; kines 100.0 2.3E-77 7.7E-82 623.1 12.4 289 14-319 50-341 (360)
23 2heh_A KIF2C protein; kinesin, 100.0 6E-77 2.1E-81 622.6 13.0 281 14-312 101-385 (387)
24 4etp_A Kinesin-like protein KA 100.0 2.6E-76 9E-81 625.1 15.1 283 14-314 108-402 (403)
25 1v8k_A Kinesin-like protein KI 100.0 1.4E-76 4.7E-81 623.4 12.5 283 14-314 121-407 (410)
26 3u06_A Protein claret segregat 100.0 1.2E-75 4E-80 619.8 14.2 279 14-313 106-386 (412)
27 3dc4_A Kinesin-like protein NO 100.0 5.2E-76 1.8E-80 609.3 10.9 277 14-314 61-340 (344)
28 4h1g_A Maltose binding protein 100.0 2.5E-71 8.6E-76 633.0 14.9 284 9-310 425-712 (715)
29 2wbe_C Bipolar kinesin KRP-130 100.0 1E-43 3.5E-48 371.9 1.5 213 353-583 27-244 (373)
30 3bfn_A Kinesin-like protein KI 100.0 1.3E-43 4.3E-48 370.9 1.4 201 353-583 25-233 (388)
31 1bg2_A Kinesin; motor protein, 100.0 2.3E-43 7.7E-48 363.1 1.6 196 354-583 12-212 (325)
32 3b6u_A Kinesin-like protein KI 100.0 3.6E-43 1.2E-47 366.5 1.6 204 353-583 25-236 (372)
33 3lre_A Kinesin-like protein KI 100.0 8.3E-43 2.9E-47 363.1 4.0 200 353-583 14-236 (355)
34 2vvg_A Kinesin-2; motor protei 100.0 4.7E-43 1.6E-47 363.6 1.5 199 354-583 9-220 (350)
35 2heh_A KIF2C protein; kinesin, 100.0 4.5E-43 1.5E-47 366.7 0.7 205 354-583 56-272 (387)
36 1v8k_A Kinesin-like protein KI 100.0 1.1E-42 3.8E-47 365.8 3.7 205 354-583 76-292 (410)
37 1x88_A Kinesin-like protein KI 100.0 2.6E-43 8.8E-48 367.5 -2.1 213 353-583 12-234 (359)
38 1t5c_A CENP-E protein, centrom 100.0 8.3E-43 2.8E-47 362.0 0.4 195 354-583 9-210 (349)
39 2zfi_A Kinesin-like protein KI 100.0 8E-43 2.7E-47 364.7 -0.7 202 354-583 9-225 (366)
40 2y65_A Kinesin, kinesin heavy 100.0 1.7E-42 5.8E-47 361.3 1.7 197 353-583 15-219 (365)
41 1goj_A Kinesin, kinesin heavy 100.0 1.2E-42 4.3E-47 361.4 0.4 202 353-583 10-216 (355)
42 2owm_A Nckin3-434, related to 100.0 4.7E-42 1.6E-46 366.2 4.2 201 353-583 42-276 (443)
43 4a14_A Kinesin, kinesin-like p 100.0 2.1E-42 7.3E-47 359.2 -0.4 201 353-583 15-222 (344)
44 3gbj_A KIF13B protein; kinesin 100.0 4.4E-42 1.5E-46 357.5 0.9 198 355-583 7-227 (354)
45 3cob_A Kinesin heavy chain-lik 100.0 1E-41 3.6E-46 355.5 1.5 197 354-583 10-214 (369)
46 1ry6_A Internal kinesin; kines 100.0 6.7E-42 2.3E-46 356.2 -0.3 203 355-583 6-220 (360)
47 3u06_A Protein claret segregat 100.0 4.4E-41 1.5E-45 355.6 2.6 201 353-583 63-273 (412)
48 2h58_A Kinesin-like protein KI 100.0 2.4E-41 8.4E-46 348.7 -0.0 198 354-583 9-215 (330)
49 3t0q_A AGR253WP; kinesin, alph 100.0 9.3E-41 3.2E-45 347.2 2.2 208 354-583 10-228 (349)
50 1f9v_A Kinesin-like protein KA 100.0 1.2E-40 4.2E-45 345.8 2.3 205 355-583 9-225 (347)
51 2rep_A Kinesin-like protein KI 100.0 4E-41 1.4E-45 352.0 -4.1 205 354-583 27-259 (376)
52 3nwn_A Kinesin-like protein KI 100.0 3.1E-40 1.1E-44 343.5 -1.3 203 354-583 29-243 (359)
53 4etp_A Kinesin-like protein KA 100.0 1.4E-39 4.9E-44 344.2 3.6 206 354-583 64-281 (403)
54 3dc4_A Kinesin-like protein NO 100.0 6.4E-40 2.2E-44 339.3 -0.3 192 354-583 27-228 (344)
55 2nr8_A Kinesin-like protein KI 100.0 2.1E-39 7.3E-44 337.1 -1.6 200 356-583 30-242 (358)
56 4h1g_A Maltose binding protein 100.0 8.8E-37 3E-41 348.1 1.2 176 376-583 412-597 (715)
57 2kin_B Kinesin; motor protein, 100.0 4E-32 1.4E-36 228.5 5.7 99 235-333 1-100 (100)
58 3kin_B Kinesin heavy chain; mo 100.0 8.4E-29 2.9E-33 215.8 7.5 96 239-334 1-97 (117)
59 2o0a_A S.cerevisiae chromosome 99.8 1.9E-21 6.6E-26 190.3 4.4 230 14-312 57-292 (298)
60 2o0a_A S.cerevisiae chromosome 99.7 7.2E-20 2.5E-24 179.3 -1.8 123 393-558 57-185 (298)
61 3ec2_A DNA replication protein 90.8 0.036 1.2E-06 50.8 -0.7 52 393-445 5-56 (180)
62 3ec2_A DNA replication protein 87.3 0.039 1.3E-06 50.6 -3.2 48 18-66 9-56 (180)
63 2w58_A DNAI, primosome compone 85.3 0.22 7.6E-06 46.2 0.9 51 394-445 21-72 (202)
64 2qgz_A Helicase loader, putati 82.7 0.34 1.2E-05 48.8 1.0 51 395-446 121-171 (308)
65 1jbk_A CLPB protein; beta barr 80.7 0.58 2E-05 42.1 1.7 31 35-65 30-60 (195)
66 2qgz_A Helicase loader, putati 80.5 0.18 6.1E-06 50.8 -2.0 19 48-66 152-170 (308)
67 2w58_A DNAI, primosome compone 79.3 0.23 8E-06 46.1 -1.5 18 49-66 55-72 (202)
68 3te6_A Regulatory protein SIR3 78.9 0.35 1.2E-05 49.0 -0.4 23 43-65 40-62 (318)
69 2p65_A Hypothetical protein PF 78.6 0.65 2.2E-05 41.7 1.4 31 35-65 30-60 (187)
70 4b4t_K 26S protease regulatory 76.8 6.3 0.00022 41.3 8.5 76 395-478 169-263 (428)
71 1jbk_A CLPB protein; beta barr 74.0 1.3 4.3E-05 39.7 2.0 31 415-445 31-61 (195)
72 3te6_A Regulatory protein SIR3 72.3 0.71 2.4E-05 46.7 -0.2 23 422-444 40-62 (318)
73 2bjv_A PSP operon transcriptio 71.8 0.85 2.9E-05 44.2 0.2 44 395-444 3-46 (265)
74 2p65_A Hypothetical protein PF 71.6 1.4 4.8E-05 39.4 1.6 31 415-445 31-61 (187)
75 1p9r_A General secretion pathw 71.5 1.2 4E-05 46.9 1.2 29 38-66 157-185 (418)
76 1g8p_A Magnesium-chelatase 38 71.3 1.6 5.4E-05 43.9 2.2 45 392-444 18-62 (350)
77 3t15_A Ribulose bisphosphate c 70.8 1.2 4E-05 44.3 1.0 17 428-444 37-53 (293)
78 2chg_A Replication factor C sm 69.8 1.2 4E-05 41.1 0.7 21 45-65 35-55 (226)
79 3jvv_A Twitching mobility prot 69.6 1.3 4.3E-05 45.6 0.9 30 37-66 112-141 (356)
80 1qde_A EIF4A, translation init 69.0 2 7E-05 40.1 2.2 25 38-64 43-67 (224)
81 3t15_A Ribulose bisphosphate c 68.7 0.68 2.3E-05 46.0 -1.3 17 49-65 37-53 (293)
82 2kjq_A DNAA-related protein; s 68.3 1.1 3.8E-05 39.7 0.1 18 49-66 37-54 (149)
83 1vec_A ATP-dependent RNA helic 67.3 2.5 8.5E-05 38.8 2.4 26 38-65 32-57 (206)
84 2gxq_A Heat resistant RNA depe 67.2 2.4 8.1E-05 39.0 2.2 26 38-65 30-55 (207)
85 3bos_A Putative DNA replicatio 66.3 2.2 7.5E-05 40.0 1.8 26 40-65 43-69 (242)
86 3bor_A Human initiation factor 65.7 1.8 6E-05 41.2 1.0 26 38-65 59-84 (237)
87 1tue_A Replication protein E1; 65.2 2 6.8E-05 40.5 1.2 27 40-66 48-76 (212)
88 3dkp_A Probable ATP-dependent 64.9 2.7 9.3E-05 39.9 2.2 25 38-64 58-82 (245)
89 1u0j_A DNA replication protein 64.8 2.6 8.9E-05 41.3 2.1 30 37-66 90-122 (267)
90 3n70_A Transport activator; si 64.4 2.2 7.6E-05 37.2 1.4 20 46-65 22-41 (145)
91 1ixz_A ATP-dependent metallopr 64.1 0.9 3.1E-05 43.8 -1.4 51 394-445 12-67 (254)
92 2v1u_A Cell division control p 64.1 1.3 4.4E-05 45.0 -0.3 20 425-444 42-61 (387)
93 2eyu_A Twitching motility prot 64.0 1.9 6.7E-05 42.0 1.0 27 39-65 16-42 (261)
94 3h4m_A Proteasome-activating n 64.0 1.7 5.9E-05 42.4 0.6 53 393-445 12-69 (285)
95 3ly5_A ATP-dependent RNA helic 63.6 2.2 7.5E-05 41.4 1.3 26 38-65 83-108 (262)
96 4b4t_I 26S protease regulatory 62.9 46 0.0016 34.8 11.2 77 395-479 179-274 (437)
97 1l8q_A Chromosomal replication 62.7 2.4 8.4E-05 42.3 1.5 50 393-445 6-55 (324)
98 3bos_A Putative DNA replicatio 62.3 3.6 0.00012 38.4 2.5 20 425-444 50-69 (242)
99 3co5_A Putative two-component 62.2 1.9 6.6E-05 37.5 0.5 21 47-67 26-46 (143)
100 2pl3_A Probable ATP-dependent 62.2 3.3 0.00011 39.1 2.2 26 38-65 54-79 (236)
101 3iuy_A Probable ATP-dependent 61.2 3.4 0.00012 38.7 2.1 26 38-65 49-74 (228)
102 3cf0_A Transitional endoplasmi 60.9 1.3 4.3E-05 44.1 -1.1 18 48-65 49-66 (301)
103 1d2n_A N-ethylmaleimide-sensit 60.8 3.4 0.00012 40.0 2.1 21 424-444 61-81 (272)
104 3cf0_A Transitional endoplasmi 60.7 2.4 8.1E-05 42.1 0.9 51 394-444 11-66 (301)
105 3uk6_A RUVB-like 2; hexameric 60.4 3.3 0.00011 41.9 2.0 29 38-66 58-88 (368)
106 2bjv_A PSP operon transcriptio 60.3 2.7 9.3E-05 40.5 1.3 19 47-65 28-46 (265)
107 1wrb_A DJVLGB; RNA helicase, D 60.0 3.8 0.00013 39.1 2.2 26 38-65 52-77 (253)
108 1t6n_A Probable ATP-dependent 59.8 3.9 0.00013 38.0 2.2 26 38-65 43-68 (220)
109 2x8a_A Nuclear valosin-contain 59.8 0.52 1.8E-05 46.5 -4.1 48 18-65 9-61 (274)
110 3syl_A Protein CBBX; photosynt 59.3 3.8 0.00013 40.3 2.2 19 47-65 66-84 (309)
111 1sxj_D Activator 1 41 kDa subu 59.3 2.2 7.7E-05 42.8 0.5 30 36-65 46-75 (353)
112 1d2n_A N-ethylmaleimide-sensit 59.1 3 0.0001 40.5 1.3 21 45-65 61-81 (272)
113 1ixz_A ATP-dependent metallopr 58.4 1.8 6.2E-05 41.5 -0.4 16 50-65 51-66 (254)
114 3fmo_B ATP-dependent RNA helic 58.3 3.9 0.00013 40.5 2.1 27 39-65 122-148 (300)
115 3b9p_A CG5977-PA, isoform A; A 58.3 2.3 7.9E-05 41.8 0.3 51 394-444 17-71 (297)
116 2r62_A Cell division protease 58.1 2.3 7.7E-05 41.1 0.2 50 394-444 7-61 (268)
117 2ewv_A Twitching motility prot 58.1 2.7 9.3E-05 43.3 0.8 28 38-65 126-153 (372)
118 2kjq_A DNAA-related protein; s 57.9 2.2 7.5E-05 37.7 0.1 18 428-445 37-54 (149)
119 3d8b_A Fidgetin-like protein 1 57.7 2.1 7.1E-05 43.7 -0.1 50 395-444 81-134 (357)
120 3fe2_A Probable ATP-dependent 57.4 4.3 0.00015 38.5 2.1 26 38-65 58-83 (242)
121 1qde_A EIF4A, translation init 57.3 4.4 0.00015 37.7 2.1 24 418-443 44-67 (224)
122 1sxj_C Activator 1 40 kDa subu 57.0 2.8 9.6E-05 42.2 0.7 32 35-66 33-64 (340)
123 3ber_A Probable ATP-dependent 56.9 4.6 0.00016 38.7 2.2 25 39-65 73-97 (249)
124 2oxc_A Probable ATP-dependent 56.8 4.7 0.00016 37.9 2.2 24 39-64 54-77 (230)
125 3llm_A ATP-dependent RNA helic 56.5 4.5 0.00015 38.3 2.1 27 37-65 67-93 (235)
126 1gvn_B Zeta; postsegregational 56.4 4 0.00014 40.3 1.8 31 35-65 15-50 (287)
127 1iy2_A ATP-dependent metallopr 56.1 1.4 4.7E-05 43.2 -1.8 17 429-445 75-91 (278)
128 3d8b_A Fidgetin-like protein 1 55.8 1.2 4.2E-05 45.4 -2.2 20 46-65 115-134 (357)
129 3b6e_A Interferon-induced heli 55.8 3 0.0001 38.3 0.7 27 38-66 40-66 (216)
130 2chg_A Replication factor C sm 55.8 4.3 0.00015 37.0 1.8 21 424-444 35-55 (226)
131 1sxj_C Activator 1 40 kDa subu 55.7 3.8 0.00013 41.2 1.5 28 418-445 37-64 (340)
132 1l8q_A Chromosomal replication 55.4 2.2 7.6E-05 42.6 -0.4 19 48-66 37-55 (324)
133 1g8p_A Magnesium-chelatase 38 55.4 3.8 0.00013 41.0 1.4 26 40-65 37-62 (350)
134 1q0u_A Bstdead; DEAD protein, 55.3 3.4 0.00012 38.5 1.0 25 38-64 33-57 (219)
135 4b4t_K 26S protease regulatory 55.3 12 0.00042 39.1 5.3 45 49-101 207-265 (428)
136 2qz4_A Paraplegin; AAA+, SPG7, 55.2 3.4 0.00012 39.4 1.0 19 47-65 38-56 (262)
137 1njg_A DNA polymerase III subu 55.0 3.1 0.00011 38.5 0.7 17 49-65 46-62 (250)
138 1vec_A ATP-dependent RNA helic 55.0 5.4 0.00018 36.5 2.3 25 418-444 33-57 (206)
139 3eiq_A Eukaryotic initiation f 54.9 5 0.00017 41.0 2.2 26 38-65 69-94 (414)
140 2z4s_A Chromosomal replication 54.8 4.2 0.00014 42.8 1.6 50 391-445 98-148 (440)
141 3fmp_B ATP-dependent RNA helic 54.7 5.1 0.00017 42.3 2.3 26 39-64 122-147 (479)
142 2gxq_A Heat resistant RNA depe 54.7 5.1 0.00017 36.6 2.1 24 418-443 31-54 (207)
143 4b4t_M 26S protease regulatory 54.1 2.2 7.6E-05 44.9 -0.6 48 18-65 180-232 (434)
144 2oap_1 GSPE-2, type II secreti 53.9 3.7 0.00013 44.2 1.0 20 45-66 259-278 (511)
145 4b4t_M 26S protease regulatory 53.9 4 0.00014 43.0 1.3 49 395-443 178-231 (434)
146 4b4t_J 26S protease regulatory 53.8 12 0.00042 38.8 5.0 76 18-101 147-241 (405)
147 1fnn_A CDC6P, cell division co 53.8 4.3 0.00015 41.2 1.5 27 418-444 32-61 (389)
148 1xwi_A SKD1 protein; VPS4B, AA 53.7 2.9 9.8E-05 42.0 0.2 50 395-444 9-62 (322)
149 1fnn_A CDC6P, cell division co 53.6 3.2 0.00011 42.1 0.5 27 39-65 32-61 (389)
150 3bor_A Human initiation factor 53.6 3.7 0.00013 38.9 0.9 25 418-444 60-84 (237)
151 2c9o_A RUVB-like 1; hexameric 53.2 4.9 0.00017 42.4 1.9 29 37-65 50-80 (456)
152 3fmo_B ATP-dependent RNA helic 53.0 5.4 0.00018 39.5 2.0 26 418-443 122-147 (300)
153 4b3f_X DNA-binding protein smu 52.9 3.6 0.00012 45.6 0.8 27 39-66 197-223 (646)
154 3dkp_A Probable ATP-dependent 52.8 5.6 0.00019 37.6 2.1 24 418-443 59-82 (245)
155 3co5_A Putative two-component 52.7 3.4 0.00012 35.9 0.5 21 426-446 26-46 (143)
156 1p9r_A General secretion pathw 52.7 4 0.00014 42.8 1.0 29 417-445 157-185 (418)
157 1xwi_A SKD1 protein; VPS4B, AA 52.4 1.7 5.7E-05 43.8 -1.9 17 49-65 46-62 (322)
158 3jvv_A Twitching mobility prot 52.3 3.8 0.00013 41.9 0.8 28 418-445 114-141 (356)
159 3n70_A Transport activator; si 52.3 3.9 0.00013 35.6 0.8 20 425-444 22-41 (145)
160 2qby_B CDC6 homolog 3, cell di 51.9 4.4 0.00015 41.1 1.2 27 39-65 35-62 (384)
161 3uk6_A RUVB-like 2; hexameric 51.6 5.6 0.00019 40.2 1.9 46 395-445 41-88 (368)
162 2fz4_A DNA repair protein RAD2 51.5 5.2 0.00018 38.1 1.6 26 39-66 101-126 (237)
163 1iy2_A ATP-dependent metallopr 51.5 2.8 9.4E-05 40.9 -0.4 16 50-65 75-90 (278)
164 1tue_A Replication protein E1; 51.4 4.6 0.00016 38.1 1.1 26 419-444 48-75 (212)
165 1iqp_A RFCS; clamp loader, ext 51.3 3.9 0.00013 40.3 0.7 27 39-65 37-63 (327)
166 3ly5_A ATP-dependent RNA helic 51.3 4.5 0.00016 39.1 1.1 25 417-443 83-107 (262)
167 3fht_A ATP-dependent RNA helic 50.8 6.3 0.00022 40.1 2.2 28 38-65 54-81 (412)
168 3h4m_A Proteasome-activating n 50.8 5.4 0.00018 38.7 1.6 19 47-65 50-68 (285)
169 2r62_A Cell division protease 50.4 1.8 6.2E-05 41.8 -1.9 18 48-65 44-61 (268)
170 1lv7_A FTSH; alpha/beta domain 50.4 4.2 0.00014 39.0 0.7 18 48-65 45-62 (257)
171 1lv7_A FTSH; alpha/beta domain 50.3 3.8 0.00013 39.3 0.4 50 394-444 8-62 (257)
172 1ofh_A ATP-dependent HSL prote 50.2 5.2 0.00018 39.1 1.4 18 48-65 50-67 (310)
173 4etp_B Spindle POLE BODY-assoc 49.9 12 0.00039 37.3 3.7 87 391-505 90-183 (333)
174 2v1u_A Cell division control p 49.7 3.6 0.00012 41.6 0.1 20 46-65 42-61 (387)
175 2j0s_A ATP-dependent RNA helic 49.7 6.7 0.00023 40.1 2.2 25 39-65 67-91 (410)
176 2pl3_A Probable ATP-dependent 49.6 6.8 0.00023 36.8 2.1 24 418-443 55-78 (236)
177 2x8a_A Nuclear valosin-contain 49.6 2.5 8.5E-05 41.5 -1.1 50 395-444 7-61 (274)
178 3iuy_A Probable ATP-dependent 49.3 6.7 0.00023 36.6 2.0 25 418-444 50-74 (228)
179 4fcw_A Chaperone protein CLPB; 48.9 4.9 0.00017 39.4 1.0 17 49-65 48-64 (311)
180 1n0w_A DNA repair protein RAD5 48.6 4.8 0.00016 37.9 0.8 31 36-66 9-42 (243)
181 2z4s_A Chromosomal replication 48.2 3.4 0.00012 43.5 -0.4 19 48-66 130-148 (440)
182 3eie_A Vacuolar protein sortin 47.9 4.8 0.00016 40.2 0.7 17 49-65 52-68 (322)
183 3pey_A ATP-dependent RNA helic 47.8 7.5 0.00026 39.2 2.2 28 38-65 34-61 (395)
184 1wrb_A DJVLGB; RNA helicase, D 47.6 7.6 0.00026 36.9 2.1 24 418-443 53-76 (253)
185 3syl_A Protein CBBX; photosynt 47.6 7.6 0.00026 38.1 2.2 19 426-444 66-84 (309)
186 3pvs_A Replication-associated 47.6 6.6 0.00022 41.5 1.8 29 37-65 39-67 (447)
187 3h1t_A Type I site-specific re 47.5 5.1 0.00018 43.6 0.9 27 39-66 190-216 (590)
188 3vfd_A Spastin; ATPase, microt 47.3 4 0.00014 42.0 0.0 53 393-445 110-166 (389)
189 3oiy_A Reverse gyrase helicase 47.2 6.2 0.00021 40.6 1.5 24 38-63 28-51 (414)
190 3fmp_B ATP-dependent RNA helic 47.0 7.9 0.00027 40.8 2.3 26 418-443 122-147 (479)
191 3eie_A Vacuolar protein sortin 47.0 3.8 0.00013 41.0 -0.2 50 395-444 15-68 (322)
192 1s2m_A Putative ATP-dependent 47.0 7.4 0.00025 39.6 2.0 26 38-65 50-75 (400)
193 3b9p_A CG5977-PA, isoform A; A 46.7 5.1 0.00017 39.2 0.7 18 48-65 54-71 (297)
194 4b4t_J 26S protease regulatory 46.6 3.6 0.00012 42.8 -0.4 76 395-478 145-239 (405)
195 2c9o_A RUVB-like 1; hexameric 46.6 6.1 0.00021 41.7 1.3 45 395-444 34-80 (456)
196 1u0j_A DNA replication protein 46.4 7.6 0.00026 38.0 1.9 29 416-444 90-121 (267)
197 1t6n_A Probable ATP-dependent 46.3 8.2 0.00028 35.7 2.1 25 418-444 44-68 (220)
198 2z0m_A 337AA long hypothetical 46.1 8.4 0.00029 37.8 2.2 26 38-65 23-48 (337)
199 4gp7_A Metallophosphoesterase; 46.1 4 0.00014 36.7 -0.2 18 49-66 10-27 (171)
200 4b4t_I 26S protease regulatory 46.0 19 0.00065 37.7 4.9 45 49-101 217-275 (437)
201 4b4t_L 26S protease subunit RP 45.5 4.1 0.00014 42.9 -0.2 49 395-443 178-231 (437)
202 1sxj_D Activator 1 41 kDa subu 45.4 5 0.00017 40.2 0.4 27 418-444 49-75 (353)
203 2eyu_A Twitching motility prot 45.2 6.1 0.00021 38.4 1.0 19 426-444 24-42 (261)
204 1in4_A RUVB, holliday junction 45.0 4 0.00014 41.1 -0.4 17 49-65 52-68 (334)
205 3fe2_A Probable ATP-dependent 44.6 8.7 0.0003 36.3 2.0 24 418-443 59-82 (242)
206 3llm_A ATP-dependent RNA helic 44.4 8.7 0.0003 36.3 1.9 24 418-443 69-92 (235)
207 2qp9_X Vacuolar protein sortin 44.3 5.5 0.00019 40.5 0.5 50 395-444 48-101 (355)
208 2qz4_A Paraplegin; AAA+, SPG7, 44.3 5.8 0.0002 37.8 0.6 19 426-444 38-56 (262)
209 2oxc_A Probable ATP-dependent 44.2 9.3 0.00032 35.8 2.1 24 418-443 54-77 (230)
210 2jlq_A Serine protease subunit 43.8 5.6 0.00019 41.9 0.5 25 39-64 11-35 (451)
211 3b85_A Phosphate starvation-in 43.7 6.1 0.00021 37.0 0.7 26 38-65 14-39 (208)
212 2qby_A CDC6 homolog 1, cell di 43.5 8.9 0.0003 38.5 2.0 20 425-444 43-62 (386)
213 3ber_A Probable ATP-dependent 43.4 9.6 0.00033 36.4 2.1 25 418-444 73-97 (249)
214 2i4i_A ATP-dependent RNA helic 43.3 9.6 0.00033 38.9 2.2 25 39-65 45-69 (417)
215 2w0m_A SSO2452; RECA, SSPF, un 43.1 6.3 0.00022 36.5 0.7 30 37-66 9-41 (235)
216 1ojl_A Transcriptional regulat 43.0 8.1 0.00028 38.3 1.5 20 46-65 23-42 (304)
217 2p5t_B PEZT; postsegregational 42.9 8 0.00027 37.1 1.4 29 37-65 16-49 (253)
218 2r44_A Uncharacterized protein 42.8 5.4 0.00019 39.8 0.2 28 37-66 37-64 (331)
219 3pfi_A Holliday junction ATP-d 42.8 8.8 0.0003 38.2 1.8 19 47-65 54-72 (338)
220 2db3_A ATP-dependent RNA helic 42.7 10 0.00034 39.6 2.2 24 40-65 87-110 (434)
221 3hu3_A Transitional endoplasmi 42.6 7.3 0.00025 41.6 1.2 51 394-444 200-255 (489)
222 3b6e_A Interferon-induced heli 42.4 6.3 0.00022 36.1 0.6 26 418-445 41-66 (216)
223 1rz3_A Hypothetical protein rb 42.3 7.7 0.00026 35.7 1.2 30 36-65 7-39 (201)
224 4b4t_L 26S protease subunit RP 42.2 7.1 0.00024 41.1 0.9 17 49-65 216-232 (437)
225 3pxg_A Negative regulator of g 42.0 9.5 0.00032 40.4 2.0 32 36-67 189-220 (468)
226 3c8u_A Fructokinase; YP_612366 42.0 6.6 0.00023 36.3 0.6 30 36-65 8-39 (208)
227 3eiq_A Eukaryotic initiation f 42.0 10 0.00035 38.6 2.2 25 417-443 69-93 (414)
228 4a74_A DNA repair and recombin 41.7 7.7 0.00026 35.9 1.1 29 37-65 11-42 (231)
229 3hu3_A Transitional endoplasmi 41.7 4.2 0.00014 43.5 -0.9 19 47-65 237-255 (489)
230 1q0u_A Bstdead; DEAD protein, 41.7 7.2 0.00025 36.2 0.9 24 418-443 34-57 (219)
231 2chq_A Replication factor C sm 41.6 6 0.00021 38.8 0.3 21 45-65 35-55 (319)
232 3i5x_A ATP-dependent RNA helic 41.4 12 0.0004 40.4 2.6 26 39-64 102-127 (563)
233 3lw7_A Adenylate kinase relate 41.3 7.1 0.00024 34.2 0.7 16 50-65 3-18 (179)
234 2qby_A CDC6 homolog 1, cell di 41.3 5.4 0.00018 40.2 -0.2 19 47-65 44-62 (386)
235 2v1x_A ATP-dependent DNA helic 41.2 11 0.00039 41.2 2.4 26 37-64 50-75 (591)
236 2qnr_A Septin-2, protein NEDD5 41.0 5.7 0.0002 39.4 0.0 24 42-65 12-35 (301)
237 3fho_A ATP-dependent RNA helic 40.8 11 0.00036 40.3 2.1 28 38-65 148-175 (508)
238 3fht_A ATP-dependent RNA helic 40.8 11 0.00037 38.3 2.1 27 417-443 54-80 (412)
239 3u61_B DNA polymerase accessor 40.4 7.1 0.00024 38.7 0.6 19 48-66 48-66 (324)
240 1w36_D RECD, exodeoxyribonucle 40.2 7.5 0.00026 42.7 0.8 25 40-66 158-182 (608)
241 2qby_B CDC6 homolog 3, cell di 40.1 11 0.00037 38.1 2.0 27 418-444 35-62 (384)
242 1sxj_B Activator 1 37 kDa subu 40.1 10 0.00035 37.1 1.7 27 39-65 33-59 (323)
243 1w5s_A Origin recognition comp 39.9 7.8 0.00027 39.6 0.9 25 41-65 40-69 (412)
244 2ewv_A Twitching motility prot 39.7 7.7 0.00026 39.8 0.8 27 418-444 127-153 (372)
245 3pvs_A Replication-associated 39.4 9.6 0.00033 40.2 1.5 29 416-444 39-67 (447)
246 3upu_A ATP-dependent DNA helic 39.2 8.2 0.00028 40.7 0.9 17 49-65 46-62 (459)
247 1xti_A Probable ATP-dependent 39.2 12 0.0004 37.8 2.1 26 38-65 37-62 (391)
248 1kgd_A CASK, peripheral plasma 38.9 6 0.00021 35.7 -0.2 16 50-65 7-22 (180)
249 2zan_A Vacuolar protein sortin 38.9 6.3 0.00021 41.5 -0.1 51 394-444 130-184 (444)
250 4b4t_H 26S protease regulatory 38.7 5.7 0.00019 42.1 -0.5 49 395-443 206-259 (467)
251 2qag_C Septin-7; cell cycle, c 38.6 5.8 0.0002 41.5 -0.4 24 42-65 25-48 (418)
252 2qp9_X Vacuolar protein sortin 38.6 7.5 0.00026 39.5 0.4 17 49-65 85-101 (355)
253 1jr3_A DNA polymerase III subu 38.5 8 0.00027 38.9 0.7 29 38-66 27-56 (373)
254 3a00_A Guanylate kinase, GMP k 38.3 5.9 0.0002 35.9 -0.4 16 50-65 3-18 (186)
255 1rif_A DAR protein, DNA helica 38.3 9.9 0.00034 36.9 1.3 26 39-66 121-146 (282)
256 3hws_A ATP-dependent CLP prote 38.2 7.9 0.00027 39.2 0.6 18 48-65 51-68 (363)
257 2fz4_A DNA repair protein RAD2 38.2 11 0.00038 35.8 1.6 25 420-446 103-127 (237)
258 3tr0_A Guanylate kinase, GMP k 38.0 6.3 0.00021 36.0 -0.2 16 50-65 9-24 (205)
259 2cvh_A DNA repair and recombin 38.0 14 0.00047 33.9 2.2 29 37-65 6-37 (220)
260 4a2p_A RIG-I, retinoic acid in 37.8 13 0.00044 39.6 2.2 25 39-65 15-39 (556)
261 1qhx_A CPT, protein (chloramph 37.8 8.7 0.0003 34.1 0.7 17 49-65 4-20 (178)
262 1ly1_A Polynucleotide kinase; 37.7 8.8 0.0003 34.0 0.7 16 50-65 4-19 (181)
263 3pey_A ATP-dependent RNA helic 37.7 13 0.00044 37.4 2.1 27 418-444 35-61 (395)
264 2gk6_A Regulator of nonsense t 37.7 8.7 0.0003 42.3 0.8 27 39-67 188-214 (624)
265 3sop_A Neuronal-specific septi 37.7 7.2 0.00025 38.1 0.1 19 47-65 1-19 (270)
266 3tau_A Guanylate kinase, GMP k 37.7 7.2 0.00025 36.1 0.1 17 49-65 9-25 (208)
267 1um8_A ATP-dependent CLP prote 37.4 8.3 0.00028 39.3 0.6 18 48-65 72-89 (376)
268 3pfi_A Holliday junction ATP-d 37.3 11 0.00038 37.5 1.5 20 425-444 53-72 (338)
269 1ofh_A ATP-dependent HSL prote 37.0 8.2 0.00028 37.6 0.4 18 427-444 50-67 (310)
270 2dr3_A UPF0273 protein PH0284; 37.0 15 0.00051 34.3 2.3 29 37-65 9-40 (247)
271 1sxj_E Activator 1 40 kDa subu 36.8 5.7 0.00019 39.9 -0.8 15 51-65 39-53 (354)
272 2j0s_A ATP-dependent RNA helic 36.8 14 0.00047 37.7 2.1 25 418-444 67-91 (410)
273 2oap_1 GSPE-2, type II secreti 36.7 9.6 0.00033 41.0 0.9 21 423-445 258-278 (511)
274 1fuu_A Yeast initiation factor 36.6 9.4 0.00032 38.5 0.8 26 38-65 50-75 (394)
275 1gvn_B Zeta; postsegregational 36.4 16 0.00056 35.7 2.5 29 415-443 16-49 (287)
276 3nbx_X ATPase RAVA; AAA+ ATPas 36.4 12 0.0004 40.2 1.5 30 36-67 31-60 (500)
277 1lvg_A Guanylate kinase, GMP k 36.3 6.4 0.00022 36.2 -0.5 16 50-65 6-21 (198)
278 3trf_A Shikimate kinase, SK; a 36.2 9.6 0.00033 34.1 0.7 16 50-65 7-22 (185)
279 3vfd_A Spastin; ATPase, microt 36.2 9.2 0.00031 39.2 0.7 18 48-65 148-165 (389)
280 3h1t_A Type I site-specific re 36.1 9.6 0.00033 41.4 0.8 28 417-445 189-216 (590)
281 1ye8_A Protein THEP1, hypothet 36.1 6.6 0.00023 35.7 -0.4 15 51-65 3-17 (178)
282 2orw_A Thymidine kinase; TMTK, 36.1 6 0.0002 36.2 -0.7 18 50-67 5-22 (184)
283 4b4t_H 26S protease regulatory 35.9 9.7 0.00033 40.3 0.8 48 18-65 208-260 (467)
284 1hqc_A RUVB; extended AAA-ATPa 35.8 9.1 0.00031 37.7 0.6 19 47-65 37-55 (324)
285 3u61_B DNA polymerase accessor 35.7 11 0.00037 37.3 1.1 19 427-445 48-66 (324)
286 2b8t_A Thymidine kinase; deoxy 35.6 6.6 0.00023 37.3 -0.5 20 48-67 12-31 (223)
287 1iqp_A RFCS; clamp loader, ext 35.6 14 0.00046 36.3 1.8 22 423-444 42-63 (327)
288 4fcw_A Chaperone protein CLPB; 35.2 11 0.00039 36.7 1.2 17 428-444 48-64 (311)
289 1rj9_A FTSY, signal recognitio 34.9 8.4 0.00029 38.4 0.1 17 49-65 103-119 (304)
290 3iij_A Coilin-interacting nucl 34.7 9.8 0.00033 34.0 0.5 17 49-65 12-28 (180)
291 3oiy_A Reverse gyrase helicase 34.6 13 0.00043 38.2 1.4 24 418-443 29-52 (414)
292 2ykg_A Probable ATP-dependent 34.6 15 0.00053 40.5 2.2 25 38-64 20-44 (696)
293 4ag6_A VIRB4 ATPase, type IV s 34.6 7.4 0.00025 40.0 -0.4 19 47-65 34-52 (392)
294 3sqw_A ATP-dependent RNA helic 34.4 17 0.00059 39.3 2.6 27 38-64 50-76 (579)
295 2zan_A Vacuolar protein sortin 34.4 10 0.00035 39.8 0.7 17 49-65 168-184 (444)
296 3i5x_A ATP-dependent RNA helic 34.3 17 0.00058 39.0 2.4 27 417-443 101-127 (563)
297 1s2m_A Putative ATP-dependent 34.0 15 0.00051 37.2 1.9 25 418-444 51-75 (400)
298 3tbk_A RIG-I helicase domain; 33.9 16 0.00056 38.6 2.2 25 39-65 12-36 (555)
299 3lfu_A DNA helicase II; SF1 he 33.9 10 0.00034 41.7 0.5 25 43-67 17-41 (647)
300 4gl2_A Interferon-induced heli 33.9 15 0.00053 40.5 2.1 26 38-65 14-39 (699)
301 1hv8_A Putative ATP-dependent 33.8 17 0.00057 36.1 2.2 26 39-65 36-61 (367)
302 2jlq_A Serine protease subunit 33.6 13 0.00043 39.1 1.2 25 418-443 11-35 (451)
303 1njg_A DNA polymerase III subu 33.1 20 0.00069 32.7 2.5 17 428-444 46-62 (250)
304 1e9r_A Conjugal transfer prote 33.1 8.3 0.00029 40.2 -0.3 19 47-65 52-70 (437)
305 3b9q_A Chloroplast SRP recepto 33.0 8.5 0.00029 38.3 -0.2 17 49-65 101-117 (302)
306 1qvr_A CLPB protein; coiled co 32.9 9.7 0.00033 43.7 0.2 44 395-446 167-210 (854)
307 1zp6_A Hypothetical protein AT 32.9 12 0.00041 33.6 0.8 17 49-65 10-26 (191)
308 1hqc_A RUVB; extended AAA-ATPa 32.7 16 0.00054 35.9 1.7 19 426-444 37-55 (324)
309 3pxi_A Negative regulator of g 32.6 18 0.00062 40.7 2.4 32 36-67 189-220 (758)
310 2bdt_A BH3686; alpha-beta prot 32.5 8.8 0.0003 34.6 -0.2 16 50-65 4-19 (189)
311 2z0m_A 337AA long hypothetical 32.2 18 0.00062 35.3 2.1 26 418-445 24-49 (337)
312 1znw_A Guanylate kinase, GMP k 32.1 9 0.00031 35.3 -0.2 16 50-65 22-37 (207)
313 2chq_A Replication factor C sm 32.0 12 0.00042 36.5 0.8 21 424-444 35-55 (319)
314 2ehv_A Hypothetical protein PH 31.9 9.4 0.00032 35.9 -0.1 28 39-66 18-48 (251)
315 2r8r_A Sensor protein; KDPD, P 31.9 8.4 0.00029 36.7 -0.4 19 49-67 7-25 (228)
316 3lnc_A Guanylate kinase, GMP k 31.8 11 0.00037 35.4 0.3 16 50-65 29-44 (231)
317 1kag_A SKI, shikimate kinase I 31.8 12 0.0004 33.1 0.5 16 50-65 6-21 (173)
318 1in4_A RUVB, holliday junction 31.7 8.4 0.00029 38.7 -0.5 17 428-444 52-68 (334)
319 2fwr_A DNA repair protein RAD2 31.6 18 0.0006 37.9 1.9 25 39-65 101-125 (472)
320 2gza_A Type IV secretion syste 31.5 9.2 0.00032 39.0 -0.3 20 45-66 174-193 (361)
321 2pt7_A CAG-ALFA; ATPase, prote 31.4 9.2 0.00031 38.5 -0.3 19 45-65 170-188 (330)
322 1sxj_E Activator 1 40 kDa subu 31.3 14 0.00046 37.0 1.0 15 430-444 39-53 (354)
323 3fho_A ATP-dependent RNA helic 31.1 18 0.00063 38.4 2.1 26 418-443 149-174 (508)
324 2i4i_A ATP-dependent RNA helic 31.0 19 0.00065 36.6 2.1 25 418-444 45-69 (417)
325 1kht_A Adenylate kinase; phosp 30.9 12 0.00042 33.4 0.5 17 49-65 4-20 (192)
326 3kb2_A SPBC2 prophage-derived 30.9 13 0.00046 32.4 0.8 16 50-65 3-18 (173)
327 3pxg_A Negative regulator of g 30.9 22 0.00077 37.4 2.6 43 396-446 178-220 (468)
328 2db3_A ATP-dependent RNA helic 30.7 19 0.00067 37.3 2.1 24 418-443 86-109 (434)
329 1xx6_A Thymidine kinase; NESG, 30.7 8 0.00028 35.7 -0.8 18 50-67 10-27 (191)
330 1sxj_A Activator 1 95 kDa subu 30.7 11 0.00036 40.5 0.0 18 48-65 77-94 (516)
331 1ojl_A Transcriptional regulat 30.6 13 0.00046 36.7 0.8 20 425-444 23-42 (304)
332 2r44_A Uncharacterized protein 30.5 12 0.00041 37.2 0.4 17 428-444 47-63 (331)
333 2xzl_A ATP-dependent helicase 30.4 13 0.00044 42.3 0.7 26 39-66 368-393 (802)
334 2px0_A Flagellar biosynthesis 30.0 11 0.00036 37.4 -0.1 18 49-66 106-123 (296)
335 1z6g_A Guanylate kinase; struc 29.8 9.6 0.00033 35.7 -0.5 16 50-65 25-40 (218)
336 2rhm_A Putative kinase; P-loop 29.7 14 0.00047 33.2 0.6 17 49-65 6-22 (193)
337 2wjy_A Regulator of nonsense t 29.6 14 0.00048 42.0 0.8 27 39-67 364-390 (800)
338 1sxj_B Activator 1 37 kDa subu 29.6 19 0.00066 35.0 1.8 22 423-444 38-59 (323)
339 3e1s_A Exodeoxyribonuclease V, 29.6 14 0.00047 40.3 0.7 26 39-66 197-222 (574)
340 1r6b_X CLPA protein; AAA+, N-t 29.5 18 0.00062 40.6 1.7 32 36-67 195-226 (758)
341 2ze6_A Isopentenyl transferase 29.4 17 0.00057 34.9 1.2 15 50-64 3-17 (253)
342 2dhr_A FTSH; AAA+ protein, hex 29.3 10 0.00035 40.6 -0.4 16 50-65 66-81 (499)
343 2i3b_A HCR-ntpase, human cance 29.1 9.9 0.00034 34.9 -0.5 16 50-65 3-18 (189)
344 4gp7_A Metallophosphoesterase; 29.0 11 0.00036 33.8 -0.3 17 429-445 11-27 (171)
345 1qvr_A CLPB protein; coiled co 28.9 11 0.00038 43.1 -0.2 33 35-67 178-210 (854)
346 1w5s_A Origin recognition comp 28.8 27 0.00091 35.4 2.7 25 420-444 40-69 (412)
347 3uie_A Adenylyl-sulfate kinase 28.8 20 0.00069 32.6 1.6 19 47-65 24-42 (200)
348 3cf2_A TER ATPase, transitiona 28.8 11 0.00038 42.8 -0.3 17 49-65 239-255 (806)
349 1gm5_A RECG; helicase, replica 28.7 18 0.00063 40.9 1.6 26 40-65 381-406 (780)
350 3vaa_A Shikimate kinase, SK; s 28.4 18 0.00061 33.0 1.2 16 50-65 27-42 (199)
351 2v1x_A ATP-dependent DNA helic 28.3 24 0.00082 38.5 2.3 26 416-443 50-75 (591)
352 4a4z_A Antiviral helicase SKI2 28.2 23 0.00078 41.4 2.3 25 38-64 46-70 (997)
353 3e70_C DPA, signal recognition 28.2 12 0.0004 37.8 -0.2 18 48-65 129-146 (328)
354 3hws_A ATP-dependent CLP prote 28.1 15 0.0005 37.2 0.5 18 427-444 51-68 (363)
355 2og2_A Putative signal recogni 28.1 12 0.0004 38.3 -0.2 17 49-65 158-174 (359)
356 3upu_A ATP-dependent DNA helic 28.0 17 0.00058 38.2 1.1 36 404-444 27-62 (459)
357 2j41_A Guanylate kinase; GMP, 28.0 16 0.00054 33.2 0.7 16 50-65 8-23 (207)
358 3sqw_A ATP-dependent RNA helic 27.9 25 0.00086 38.0 2.4 27 417-443 50-76 (579)
359 1w36_D RECD, exodeoxyribonucle 27.7 12 0.00041 41.1 -0.2 19 427-445 164-182 (608)
360 1oyw_A RECQ helicase, ATP-depe 27.5 16 0.00054 39.2 0.7 27 37-65 31-57 (523)
361 1y63_A LMAJ004144AAA protein; 27.3 16 0.00053 32.9 0.5 16 50-65 12-27 (184)
362 3cm0_A Adenylate kinase; ATP-b 27.2 17 0.00057 32.5 0.7 16 50-65 6-21 (186)
363 1um8_A ATP-dependent CLP prote 27.2 15 0.00051 37.3 0.4 18 427-444 72-89 (376)
364 1xti_A Probable ATP-dependent 27.2 24 0.00083 35.4 2.0 25 418-444 38-62 (391)
365 2cvh_A DNA repair and recombin 26.9 27 0.00093 31.8 2.2 29 416-444 6-37 (220)
366 1tev_A UMP-CMP kinase; ploop, 26.9 16 0.00055 32.6 0.5 16 50-65 5-20 (196)
367 1odf_A YGR205W, hypothetical 3 26.9 23 0.0008 34.8 1.8 20 46-65 29-48 (290)
368 1nks_A Adenylate kinase; therm 26.9 16 0.00056 32.5 0.6 16 50-65 3-18 (194)
369 2r8r_A Sensor protein; KDPD, P 26.8 11 0.00039 35.8 -0.5 20 428-447 7-26 (228)
370 3b85_A Phosphate starvation-in 26.6 16 0.00055 34.0 0.5 25 418-444 15-39 (208)
371 1knq_A Gluconate kinase; ALFA/ 26.6 17 0.00059 32.1 0.7 17 49-65 9-25 (175)
372 2qor_A Guanylate kinase; phosp 26.6 19 0.00064 33.0 1.0 16 50-65 14-29 (204)
373 1e9r_A Conjugal transfer prote 26.5 12 0.00042 38.8 -0.4 19 426-444 52-70 (437)
374 4ag6_A VIRB4 ATPase, type IV s 26.5 12 0.00042 38.3 -0.4 18 427-444 35-52 (392)
375 1uaa_A REP helicase, protein ( 26.3 15 0.00052 40.6 0.3 22 46-67 13-34 (673)
376 1e6c_A Shikimate kinase; phosp 26.2 17 0.00056 32.0 0.5 16 50-65 4-19 (173)
377 3nbx_X ATPase RAVA; AAA+ ATPas 26.1 23 0.0008 37.8 1.7 25 418-444 34-58 (500)
378 3pxi_A Negative regulator of g 26.0 29 0.001 38.9 2.6 32 415-446 189-220 (758)
379 1uf9_A TT1252 protein; P-loop, 26.0 21 0.00072 32.2 1.2 20 46-65 6-25 (203)
380 2fna_A Conserved hypothetical 25.9 17 0.00057 36.0 0.5 17 49-65 31-47 (357)
381 1vma_A Cell division protein F 25.8 14 0.00046 36.9 -0.2 17 49-65 105-121 (306)
382 1f2t_A RAD50 ABC-ATPase; DNA d 25.8 23 0.0008 30.8 1.4 16 50-65 25-40 (149)
383 1via_A Shikimate kinase; struc 25.8 17 0.00059 32.2 0.5 16 50-65 6-21 (175)
384 2ce7_A Cell division protein F 25.8 14 0.00049 39.2 -0.0 17 428-444 50-66 (476)
385 4a2p_A RIG-I, retinoic acid in 25.7 26 0.0009 37.1 2.1 25 418-444 15-39 (556)
386 1gku_B Reverse gyrase, TOP-RG; 25.6 24 0.00082 41.4 1.8 24 38-63 63-86 (1054)
387 2r2a_A Uncharacterized protein 25.5 18 0.0006 33.6 0.5 16 50-65 7-22 (199)
388 1s96_A Guanylate kinase, GMP k 25.3 14 0.00047 34.8 -0.2 16 50-65 18-33 (219)
389 1lkx_A Myosin IE heavy chain; 25.3 30 0.001 38.5 2.5 20 45-64 91-110 (697)
390 3kta_A Chromosome segregation 25.2 24 0.0008 31.4 1.3 16 50-65 28-43 (182)
391 4b3f_X DNA-binding protein smu 25.2 13 0.00045 41.0 -0.5 27 418-445 197-223 (646)
392 3t61_A Gluconokinase; PSI-biol 25.2 18 0.00061 32.9 0.5 17 49-65 19-35 (202)
393 2vli_A Antibiotic resistance p 25.1 18 0.00062 32.0 0.6 17 49-65 6-22 (183)
394 2iyv_A Shikimate kinase, SK; t 25.1 18 0.00062 32.2 0.5 15 50-64 4-18 (184)
395 2qmh_A HPR kinase/phosphorylas 25.1 19 0.00066 33.6 0.7 20 46-65 32-51 (205)
396 4a2q_A RIG-I, retinoic acid in 25.0 28 0.00096 39.4 2.2 26 38-65 255-280 (797)
397 2bwj_A Adenylate kinase 5; pho 25.0 19 0.00064 32.4 0.6 16 50-65 14-29 (199)
398 1n0w_A DNA repair protein RAD5 25.0 31 0.001 32.0 2.2 31 415-445 9-42 (243)
399 3cf2_A TER ATPase, transitiona 25.0 22 0.00076 40.4 1.3 50 394-443 200-254 (806)
400 2zts_A Putative uncharacterize 24.9 21 0.00072 33.3 1.0 30 36-65 15-47 (251)
401 1htw_A HI0065; nucleotide-bind 24.9 14 0.00049 32.7 -0.2 18 49-66 34-51 (158)
402 4a74_A DNA repair and recombin 24.8 19 0.00066 33.1 0.7 29 416-444 11-42 (231)
403 2v6i_A RNA helicase; membrane, 24.8 22 0.00075 37.0 1.2 16 50-65 4-19 (431)
404 3asz_A Uridine kinase; cytidin 24.8 15 0.00051 33.6 -0.1 16 50-65 8-23 (211)
405 3lw7_A Adenylate kinase relate 24.8 21 0.00073 30.9 0.9 15 429-443 3-17 (179)
406 1rif_A DAR protein, DNA helica 24.7 22 0.00076 34.3 1.1 25 419-445 122-146 (282)
407 2ce7_A Cell division protein F 24.7 18 0.00062 38.4 0.5 17 49-65 50-66 (476)
408 2dr3_A UPF0273 protein PH0284; 24.7 32 0.0011 31.9 2.3 28 417-444 10-40 (247)
409 1hv8_A Putative ATP-dependent 24.7 29 0.00099 34.3 2.0 25 419-444 37-61 (367)
410 2ga8_A Hypothetical 39.9 kDa p 24.6 26 0.00089 35.7 1.6 21 45-65 21-41 (359)
411 3tif_A Uncharacterized ABC tra 24.6 15 0.0005 35.0 -0.2 16 50-65 33-48 (235)
412 1v5w_A DMC1, meiotic recombina 24.6 32 0.0011 34.6 2.3 31 36-66 107-140 (343)
413 1fuu_A Yeast initiation factor 24.6 19 0.00066 36.1 0.7 24 418-443 51-74 (394)
414 1pzn_A RAD51, DNA repair and r 24.6 35 0.0012 34.4 2.6 30 36-65 116-148 (349)
415 3t5d_A Septin-7; GTP-binding p 24.4 25 0.00086 33.9 1.5 21 45-65 5-25 (274)
416 1c9k_A COBU, adenosylcobinamid 24.4 23 0.00079 32.3 1.1 13 51-63 2-14 (180)
417 2oca_A DAR protein, ATP-depend 24.4 26 0.00088 37.0 1.6 26 39-66 121-146 (510)
418 1wp9_A ATP-dependent RNA helic 24.2 28 0.00096 35.7 1.9 25 39-66 17-41 (494)
419 1cr0_A DNA primase/helicase; R 24.1 22 0.00075 34.6 1.0 28 38-65 23-52 (296)
420 3a8t_A Adenylate isopentenyltr 24.1 24 0.0008 35.7 1.2 15 50-64 42-56 (339)
421 1w9i_A Myosin II heavy chain; 24.0 33 0.0011 38.7 2.5 21 45-65 169-189 (770)
422 2z43_A DNA repair and recombin 24.0 33 0.0011 34.1 2.3 31 36-66 92-125 (324)
423 3rc3_A ATP-dependent RNA helic 24.0 19 0.00065 40.1 0.5 21 42-64 151-171 (677)
424 1zd8_A GTP:AMP phosphotransfer 23.9 20 0.00069 33.4 0.6 17 49-65 8-24 (227)
425 2i1q_A DNA repair and recombin 23.8 35 0.0012 33.7 2.4 31 36-66 83-116 (322)
426 2zj8_A DNA helicase, putative 23.8 21 0.00072 39.8 0.9 21 43-65 36-56 (720)
427 2p5t_B PEZT; postsegregational 23.6 34 0.0011 32.5 2.2 16 428-443 33-48 (253)
428 3sr0_A Adenylate kinase; phosp 23.6 20 0.00068 33.3 0.5 13 51-63 3-15 (206)
429 2v26_A Myosin VI; calmodulin-b 23.6 34 0.0012 38.7 2.5 20 45-64 137-156 (784)
430 2pt5_A Shikimate kinase, SK; a 23.6 20 0.00067 31.3 0.5 16 50-65 2-17 (168)
431 1qf9_A UMP/CMP kinase, protein 23.5 21 0.00071 31.8 0.6 16 50-65 8-23 (194)
432 2c95_A Adenylate kinase 1; tra 23.4 21 0.00072 32.0 0.6 17 49-65 10-26 (196)
433 1moz_A ARL1, ADP-ribosylation 23.3 32 0.0011 30.1 1.9 27 39-65 8-35 (183)
434 1ye8_A Protein THEP1, hypothet 23.3 15 0.0005 33.3 -0.5 15 430-444 3-17 (178)
435 3umf_A Adenylate kinase; rossm 23.2 20 0.00069 33.7 0.5 14 50-63 31-44 (217)
436 2qen_A Walker-type ATPase; unk 23.2 31 0.0011 33.9 1.9 17 49-65 32-48 (350)
437 2gk6_A Regulator of nonsense t 23.2 21 0.00071 39.3 0.6 18 429-446 197-214 (624)
438 3foz_A TRNA delta(2)-isopenten 23.0 25 0.00087 35.1 1.2 17 49-65 11-27 (316)
439 4etp_B Spindle POLE BODY-assoc 23.0 35 0.0012 33.9 2.1 207 14-290 92-309 (333)
440 3tr0_A Guanylate kinase, GMP k 23.0 16 0.00055 33.1 -0.3 16 429-444 9-24 (205)
441 1gm5_A RECG; helicase, replica 22.9 29 0.00098 39.3 1.7 39 402-444 368-406 (780)
442 1ukz_A Uridylate kinase; trans 22.9 21 0.00072 32.4 0.5 17 49-65 16-32 (203)
443 3fb4_A Adenylate kinase; psych 22.9 21 0.00072 32.7 0.5 15 51-65 3-17 (216)
444 3a4m_A L-seryl-tRNA(SEC) kinas 22.8 22 0.00076 34.0 0.7 17 49-65 5-21 (260)
445 3crm_A TRNA delta(2)-isopenten 22.8 26 0.00087 35.2 1.2 16 49-64 6-21 (323)
446 3m6a_A ATP-dependent protease 22.8 17 0.00057 39.3 -0.2 17 49-65 109-125 (543)
447 2ykg_A Probable ATP-dependent 22.8 32 0.0011 37.9 2.1 24 418-443 21-44 (696)
448 1kk8_A Myosin heavy chain, str 22.7 35 0.0012 38.9 2.4 20 45-64 166-185 (837)
449 3iij_A Coilin-interacting nucl 22.7 21 0.00072 31.7 0.5 17 428-444 12-28 (180)
450 1c4o_A DNA nucleotide excision 22.7 29 0.00098 38.5 1.7 46 395-446 2-47 (664)
451 3sop_A Neuronal-specific septi 22.7 18 0.00063 35.1 0.1 18 427-444 2-19 (270)
452 2yhs_A FTSY, cell division pro 22.7 17 0.00058 38.8 -0.2 17 49-65 294-310 (503)
453 1aky_A Adenylate kinase; ATP:A 22.6 21 0.00073 32.9 0.5 16 50-65 6-21 (220)
454 3tbk_A RIG-I helicase domain; 22.6 33 0.0011 36.2 2.1 24 418-443 12-35 (555)
455 4db1_A Myosin-7; S1DC, cardiac 22.5 37 0.0013 38.4 2.5 21 45-65 168-188 (783)
456 1r6b_X CLPA protein; AAA+, N-t 22.5 32 0.0011 38.6 2.0 32 415-446 195-226 (758)
457 2xgj_A ATP-dependent RNA helic 22.4 31 0.0011 40.3 1.9 24 39-64 94-117 (1010)
458 1xjc_A MOBB protein homolog; s 22.3 17 0.00059 32.7 -0.2 16 50-65 6-21 (169)
459 1rz3_A Hypothetical protein rb 22.2 46 0.0016 30.2 2.7 29 416-444 8-39 (201)
460 1w7j_A Myosin VA; motor protei 22.0 38 0.0013 38.4 2.5 20 45-64 153-172 (795)
461 3l9o_A ATP-dependent RNA helic 22.0 29 0.001 40.9 1.6 25 38-64 191-215 (1108)
462 2gno_A DNA polymerase III, gam 21.9 37 0.0013 33.5 2.2 31 35-65 5-35 (305)
463 4gl2_A Interferon-induced heli 21.9 33 0.0011 37.8 1.9 26 418-445 15-40 (699)
464 3trf_A Shikimate kinase, SK; a 21.9 28 0.00096 30.9 1.2 14 429-442 7-20 (185)
465 1w4r_A Thymidine kinase; type 21.9 32 0.0011 31.8 1.6 23 40-62 12-34 (195)
466 1yks_A Genome polyprotein [con 21.8 26 0.00089 36.5 1.1 21 43-65 5-25 (440)
467 1qhx_A CPT, protein (chloramph 21.8 28 0.00097 30.6 1.2 16 428-443 4-19 (178)
468 2bbw_A Adenylate kinase 4, AK4 21.8 24 0.00083 33.3 0.7 17 49-65 28-44 (246)
469 3lfu_A DNA helicase II; SF1 he 21.8 21 0.00073 39.0 0.4 20 427-446 22-41 (647)
470 3exa_A TRNA delta(2)-isopenten 21.8 26 0.00089 35.1 1.0 16 50-65 5-20 (322)
471 2yvu_A Probable adenylyl-sulfa 21.7 26 0.0009 31.3 0.9 17 49-65 14-30 (186)
472 3dl0_A Adenylate kinase; phosp 21.7 23 0.00079 32.5 0.5 15 51-65 3-17 (216)
473 4a2w_A RIG-I, retinoic acid in 21.6 35 0.0012 39.4 2.2 27 38-66 255-281 (936)
474 2z83_A Helicase/nucleoside tri 21.6 29 0.00098 36.4 1.3 15 50-64 23-37 (459)
475 1rj9_A FTSY, signal recognitio 21.6 20 0.00068 35.6 0.0 17 428-444 103-119 (304)
476 2p6r_A Afuhel308 helicase; pro 21.6 22 0.00075 39.5 0.4 25 39-65 33-57 (702)
477 2orw_A Thymidine kinase; TMTK, 21.6 15 0.00052 33.4 -0.8 18 429-446 5-22 (184)
478 1ly1_A Polynucleotide kinase; 21.5 27 0.00093 30.6 1.0 15 429-443 4-18 (181)
479 1g41_A Heat shock protein HSLU 21.5 23 0.00079 37.2 0.5 17 49-65 51-67 (444)
480 1g8x_A Myosin II heavy chain f 21.5 40 0.0014 39.3 2.6 20 45-64 169-188 (1010)
481 4ddu_A Reverse gyrase; topoiso 21.3 33 0.0011 40.5 1.9 24 38-63 85-108 (1104)
482 2pcj_A ABC transporter, lipopr 21.2 19 0.00066 33.8 -0.1 15 51-65 33-47 (224)
483 1zak_A Adenylate kinase; ATP:A 21.2 25 0.00084 32.5 0.6 16 50-65 7-22 (222)
484 2ze6_A Isopentenyl transferase 21.2 27 0.00094 33.3 1.0 14 429-442 3-16 (253)
485 2if2_A Dephospho-COA kinase; a 21.1 25 0.00085 31.9 0.6 16 50-65 3-18 (204)
486 2vhj_A Ntpase P4, P4; non- hyd 21.1 27 0.00094 35.1 1.0 18 49-66 124-141 (331)
487 2w0m_A SSO2452; RECA, SSPF, un 21.0 42 0.0014 30.7 2.2 28 417-444 10-40 (235)
488 2cdn_A Adenylate kinase; phosp 21.0 29 0.001 31.4 1.1 20 46-65 18-37 (201)
489 1sxj_A Activator 1 95 kDa subu 20.9 42 0.0014 35.8 2.4 17 428-444 78-94 (516)
490 1lvg_A Guanylate kinase, GMP k 20.9 18 0.00061 33.2 -0.5 16 429-444 6-21 (198)
491 1ak2_A Adenylate kinase isoenz 20.8 25 0.00084 33.0 0.5 18 48-65 16-33 (233)
492 2fwr_A DNA repair protein RAD2 20.8 36 0.0012 35.4 1.9 24 419-444 102-125 (472)
493 2iut_A DNA translocase FTSK; n 20.7 19 0.00063 39.2 -0.4 17 49-65 215-231 (574)
494 2b8t_A Thymidine kinase; deoxy 20.7 16 0.00053 34.6 -0.9 20 428-447 13-32 (223)
495 3k1j_A LON protease, ATP-depen 20.6 24 0.00083 38.5 0.5 29 36-66 50-78 (604)
496 2d7d_A Uvrabc system protein B 20.6 35 0.0012 37.7 1.8 49 393-446 3-51 (661)
497 2qnr_A Septin-2, protein NEDD5 20.5 33 0.0011 33.8 1.4 24 421-444 12-35 (301)
498 2ycu_A Non muscle myosin 2C, a 20.5 43 0.0015 39.0 2.5 20 45-64 143-162 (995)
499 2jaq_A Deoxyguanosine kinase; 20.4 25 0.00086 31.6 0.5 15 51-65 3-17 (205)
500 1pjr_A PCRA; DNA repair, DNA r 20.3 24 0.00081 39.6 0.3 21 47-67 23-43 (724)
No 1
>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ...
Probab=100.00 E-value=1.1e-83 Score=671.89 Aligned_cols=305 Identities=68% Similarity=1.067 Sum_probs=262.6
Q ss_pred eeeeeehhhcccCCceEEEeehhhhhhHHHHhcccceeEEEeeccCCCceEEeecccCCCCCCCcccCCCCccchhhhhH
Q psy9448 13 MVVSVMFLVCIFYTTIVDVYKYVVNPLIDEVLSGYNCTVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNH 92 (583)
Q Consensus 13 ~~~~~~D~Vf~~~~tq~~vy~~~~~plv~~~l~G~n~~i~ayGqtgSGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~ 92 (583)
...|.||+||+++++|++||+.+++|+|+++++|||+||||||||||||||||+|....+....+..++..|||||++++
T Consensus 54 ~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv~~~l~G~n~tifAYGqTGSGKTyTM~G~~~~~~~~~~~~~~~~Giipr~~~~ 133 (359)
T 1x88_A 54 RKTYTFDMVFGASTKQIDVYRSVVCPILDEVIMGYNCTIFAYGQTGTGKTFTMEGERSPNEEYTWEEDPLAGIIPRTLHQ 133 (359)
T ss_dssp EEEEECSEEECTTCCHHHHHHHHHHHHHHHHHTTCEEEEEEEECTTSSHHHHHTBCCCGGGCSCGGGCTTBCHHHHHHHH
T ss_pred ceEEeceEEEeccCchhHHHHHHHHHhHHHHhCCCceEEEEeCCCCCCCceEEeccCCccccccccccccCCchHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999998654333344445567999999999
Q ss_pred HHHHHhhccceeEEEEEeehhhchHHhhhhcCCCCcc-ceEEeeeccccccceEEeccceeeecchhHHHHHHHhcchhh
Q psy9448 93 LFDELRLLGDAEFTVRVSFLEIYNEELIDLLSPTDDI-TKLRLFEDSARKGSVIIQGLEEKAVHNKDEVYKILEKGSQKR 171 (583)
Q Consensus 93 lf~~~~~~~~~~~~v~vS~~EIyne~v~DLL~~~~~~-~~l~i~~~~~~~~~~~v~~l~~~~v~s~~e~~~ll~~g~~~R 171 (583)
||+.++. .+.+|.|+|||+|||||+|+|||+|.... ..+++++++..+++++|+|++++.|.|++|++++|..|.++|
T Consensus 134 lF~~i~~-~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~l~i~~~~~~~~~v~v~gl~~~~v~s~~e~~~ll~~g~~~R 212 (359)
T 1x88_A 134 IFEKLTD-NGTEFSVKVSLLEIYNEELFDLLNPSSDVSERLQMFDDPRNKRGVIIKGLEEITVHNKDEVYQILEKGAAKR 212 (359)
T ss_dssp HHHHTSS-SSEEEEEEEEEEEEETTEEEETTCTTSCTTCCBEEEEETTEEEEEEEETCCCEEECSGGGHHHHHHHHHHHH
T ss_pred HHHHHhc-cCceEEEEEEEEEEeCceeeehhcccccccccceEEeccCCCCCEEEcCCEEEEcCCHHHHHHHHHHHHhhc
Confidence 9999876 56789999999999999999999986543 568899988667899999999999999999999999999999
Q ss_pred hhHHHHhhhcccCceeEEEEEEEeecCCCChhhHhhccCceeeeccCCcccCccchhhhhhhhhcCcchhhhhhhhHHHH
Q psy9448 172 QTAATLMNAHSSRSHTIFTITIHIKDNSLDGEELLRTGKLNLVDLAGSENIGRSGAQDKRAREAGNINQSLLTLGRCITA 251 (583)
Q Consensus 172 ~~~~t~~n~~SSRSH~i~~i~i~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~~~~~~~~~~E~~~In~SL~~L~~vi~a 251 (583)
++++|.||..|||||+||+|+|+......++......|+|+|||||||||..++++.|.|++|+.+||+||++||+||.+
T Consensus 213 ~~~~T~~N~~SSRSH~if~i~i~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~a 292 (359)
T 1x88_A 213 TTAATLMNAYSSRSHSVFSVTIHMKETTIDGEELVKIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITA 292 (359)
T ss_dssp HHHHHHSTTHHHHCEEEEEEEEEEEEECTTSCEEEEEEEEEEEECCCCCC---------------CCCHHHHHHHHHHHH
T ss_pred ccccccCCCCCCCccEEEEEEEEEecccCCCCceEEEEEEEEEcCCCCCcccccCCcccchHHHhhhhHHHHHHHHHHHH
Confidence 99999999999999999999998765444444555679999999999999999999999999999999999999999999
Q ss_pred HhhhCCCCCcchhhHhHHhhhhcCCcceeeEEEEeCccccchhhhhhhhhhhhhhccCCCchhhhhh
Q psy9448 252 LVEKTPHIPYRESKLTRLLQDSLGGRTKTSIIATVSPAQLNMEETLSTLDYAHRAKNITNRPEINQK 318 (583)
Q Consensus 252 L~~~~~~ipyR~SkLT~lL~d~Lggn~~t~~I~~vsp~~~~~~eTl~TL~fa~r~k~i~n~~~~n~~ 318 (583)
|+++..||||||||||+||||+||||++|+||+||||+..+++||++||+||+|||+|+|+|.+|++
T Consensus 293 L~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~vsP~~~~~~ETl~TLrfA~rak~I~n~p~vn~~ 359 (359)
T 1x88_A 293 LVERTPHVPYRESKLTRILQDSLGGRTRTSIIATISPASLNLEETLSTLEYAHRAKNILNKPEVNQK 359 (359)
T ss_dssp HHTTCSCCCGGGSHHHHHTGGGSSSSSEEEEEEEECCCGGGHHHHHHHHHHHHHHTTCCCCCC----
T ss_pred HhcCCCCCccccchHHHHHHHHhCCCCeEEEEEEECCCcccHHHHHHHHHHHHHHhhccCcceeCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999973
No 2
>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A*
Probab=100.00 E-value=6.9e-83 Score=665.81 Aligned_cols=309 Identities=39% Similarity=0.620 Sum_probs=261.2
Q ss_pred eeeeehhhcccCCceEEEeehhhhhhHHHHhcccceeEEEeeccCCCceEEeecccCCCCCCCcccCCCCccchhhhhHH
Q psy9448 14 VVSVMFLVCIFYTTIVDVYKYVVNPLIDEVLSGYNCTVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHL 93 (583)
Q Consensus 14 ~~~~~D~Vf~~~~tq~~vy~~~~~plv~~~l~G~n~~i~ayGqtgSGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~l 93 (583)
..|.||+||+++++|++||+.+++|+|+++++|||+||||||||||||||||+|....+ ...|||||++++|
T Consensus 51 ~~f~FD~Vf~~~~~Q~~Vy~~~~~plv~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~~--------~~~Giipr~~~~l 122 (365)
T 2y65_A 51 KVYLFDKVFKPNASQEKVYNEAAKSIVTDVLAGYNGTIFAYGQTSSGKTHTMEGVIGDS--------VKQGIIPRIVNDI 122 (365)
T ss_dssp EEEECSEEECTTCCHHHHHHHHTHHHHHHHHTTCCEEEEEECSTTSSHHHHHTBSTTCT--------TTBCHHHHHHHHH
T ss_pred EEEeCceEecCCCCHHHHHHHhhhhHHHHHhCCCceEEEeecCCCCCCceEEecCCCCc--------ccCChHHHHHHHH
Confidence 35779999999999999999999999999999999999999999999999999975432 3469999999999
Q ss_pred HHHHhhc-cceeEEEEEeehhhchHHhhhhcCCCCccceEEeeeccccccceEEeccceeeecchhHHHHHHHhcchhhh
Q psy9448 94 FDELRLL-GDAEFTVRVSFLEIYNEELIDLLSPTDDITKLRLFEDSARKGSVIIQGLEEKAVHNKDEVYKILEKGSQKRQ 172 (583)
Q Consensus 94 f~~~~~~-~~~~~~v~vS~~EIyne~v~DLL~~~~~~~~l~i~~~~~~~~~~~v~~l~~~~v~s~~e~~~ll~~g~~~R~ 172 (583)
|+.+... .+.+|.|++||+|||||+|+|||++.. ..+.+++++ .++++|.|++++.|.|++|++++|..|.++|+
T Consensus 123 F~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~--~~l~i~e~~--~~~~~v~gl~~~~V~s~~e~~~ll~~g~~~R~ 198 (365)
T 2y65_A 123 FNHIYAMEVNLEFHIKVSYYEIYMDKIRDLLDVSK--VNLSVHEDK--NRVPYVKGATERFVSSPEDVFEVIEEGKSNRH 198 (365)
T ss_dssp HHHHHHCCSCEEEEEEEEEEEEETTEEEETTCTTC--CSBCEEECS--SSCEEETTCCCEEECSHHHHHHHHHHHHHHHT
T ss_pred HHHHHhccCCceEEEEEEEEEEECCeeeecccCCc--CCceEEECC--CCCEEecCCEEEecCCHHHHHHHHHHHHhhcc
Confidence 9999764 467899999999999999999998754 467888887 67899999999999999999999999999999
Q ss_pred hHHHHhhhcccCceeEEEEEEEeecCCCChhhHhhccCceeeeccCCcccCccchhhhhhhhhcCcchhhhhhhhHHHHH
Q psy9448 173 TAATLMNAHSSRSHTIFTITIHIKDNSLDGEELLRTGKLNLVDLAGSENIGRSGAQDKRAREAGNINQSLLTLGRCITAL 252 (583)
Q Consensus 173 ~~~t~~n~~SSRSH~i~~i~i~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~~~~~~~~~~E~~~In~SL~~L~~vi~aL 252 (583)
+++|.||..|||||+||+|+|.+..... .....|+|+|||||||||..++++.|.+++|+.+||+||++||+||.+|
T Consensus 199 ~~~T~~N~~SSRSH~if~i~v~~~~~~~---~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL 275 (365)
T 2y65_A 199 IAVTNMNEHSSRSHSVFLINVKQENLEN---QKKLSGKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSALGNVISAL 275 (365)
T ss_dssp TTCSCHHHHHHTSEEEEEEEEEEEETTT---CCEEEEEEEEEECCCCCC----------------CCHHHHHHHHHHHHH
T ss_pred cccccCCCCCCCceEEEEEEEEEEecCC---CCEeEEEEEEEECCCCCcchhcCCcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998765322 1235689999999999999999999999999999999999999999999
Q ss_pred hhh-CCCCCcchhhHhHHhhhhcCCcceeeEEEEeCccccchhhhhhhhhhhhhhccCCCchhhhhhhhHHHHHHHHHHH
Q psy9448 253 VEK-TPHIPYRESKLTRLLQDSLGGRTKTSIIATVSPAQLNMEETLSTLDYAHRAKNITNRPEINQKMSKKALLRVTSIN 331 (583)
Q Consensus 253 ~~~-~~~ipyR~SkLT~lL~d~Lggn~~t~~I~~vsp~~~~~~eTl~TL~fa~r~k~i~n~~~~n~~~~~~~~~~~~~~e 331 (583)
+++ ..||||||||||+||||+||||++|+||+||||+..+++||++||+||+|||+|+|.|.+|++++.+.+++.|++|
T Consensus 276 ~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~~~~~~ETl~TL~fA~rak~I~n~~~~n~~~~~~~~~~~~~~e 355 (365)
T 2y65_A 276 ADGNKTHIPYRDSKLTRILQESLGGNARTTIVICCSPASFNESETKSTLDFGRRAKTVKNVVCVNEELTAEEWKRRYEKE 355 (365)
T ss_dssp HHCCCSCCCGGGCHHHHHTGGGTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTCEEECCCEEECCSHHHHHC----
T ss_pred hcCCCCCCccccCHHHHHHHhhcCCCccEEEEEEecCccCCHHHHHHHHHHHHHHhcccCcceeCCCCCHHHHHHHHHHH
Confidence 987 5799999999999999999999999999999999999999999999999999999999999999988899999998
Q ss_pred HHHhhhh
Q psy9448 332 MEETLST 338 (583)
Q Consensus 332 ~~~~l~~ 338 (583)
+++ ++.
T Consensus 356 ~~~-~~~ 361 (365)
T 2y65_A 356 KEK-NAR 361 (365)
T ss_dssp -------
T ss_pred HHH-HHH
Confidence 887 554
No 3
>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A*
Probab=100.00 E-value=4.8e-83 Score=667.06 Aligned_cols=305 Identities=47% Similarity=0.729 Sum_probs=260.1
Q ss_pred eeeeeehhhcccCCceEEEeehhhhhhHHHHhcccceeEEEeeccCCCceEEeecccCCCCCCCcccCCCCccchhhhhH
Q psy9448 13 MVVSVMFLVCIFYTTIVDVYKYVVNPLIDEVLSGYNCTVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNH 92 (583)
Q Consensus 13 ~~~~~~D~Vf~~~~tq~~vy~~~~~plv~~~l~G~n~~i~ayGqtgSGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~ 92 (583)
...|.||+||+++++|++||+.+++|+|+++++|||+||||||||||||||||+|.... ....|||||++++
T Consensus 67 ~~~F~FD~Vf~~~~~Q~~Vy~~~~~plv~~~l~G~n~tifAYGqTGSGKTyTM~G~~~~--------~~~~Giipr~~~~ 138 (372)
T 3b6u_A 67 PKTFTFDAVYDWNAKQFELYDETFRPLVDSVLQGFNGTIFAYGQTGTGKTYTMEGIRGD--------PEKRGVIPNSFDH 138 (372)
T ss_dssp CEEEECSEEECTTCCHHHHHHHTHHHHHHHHHTTCCEEEEEEESTTSSHHHHHTBCTTS--------GGGBCHHHHHHHH
T ss_pred ceEEEcCeEeCCcCchHHHHHHHHHHHHHHHhCCCeeeEEeecCCCCCCCEeEecCCCC--------cccCCcHHHHHHH
Confidence 35688999999999999999999999999999999999999999999999999997542 2346999999999
Q ss_pred HHHHHhhccceeEEEEEeehhhchHHhhhhcCCCCccceEEeeeccccccceEEeccceeeecchhHHHHHHHhcchhhh
Q psy9448 93 LFDELRLLGDAEFTVRVSFLEIYNEELIDLLSPTDDITKLRLFEDSARKGSVIIQGLEEKAVHNKDEVYKILEKGSQKRQ 172 (583)
Q Consensus 93 lf~~~~~~~~~~~~v~vS~~EIyne~v~DLL~~~~~~~~l~i~~~~~~~~~~~v~~l~~~~v~s~~e~~~ll~~g~~~R~ 172 (583)
||+.++...+..|.|++||+|||||+|+|||++... ..+++++++ .++++|+|++++.|.|++|++++|..|.++|+
T Consensus 139 lF~~i~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~-~~l~i~e~~--~~~v~v~gl~~~~v~s~~e~~~ll~~g~~~R~ 215 (372)
T 3b6u_A 139 IFTHISRSQNQQYLVRASYLEIYQEEIRDLLSKDQT-KRLELKERP--DTGVYVKDLSSFVTKSVKEIEHVMNVGNQNRS 215 (372)
T ss_dssp HHHHHHTCSSCEEEEEEEEEEEETTEEEETTSSCTT-CCBCEEEET--TTEEEETTCCCEECCSHHHHHHHHHHHHHHHT
T ss_pred HHHHhhhccCCceEEEEEEEEEeCCEEEECCCCCCC-CCceEEECC--CCcEecCCCEEEEecCHHHHHHHHHHHHHhcC
Confidence 999999888889999999999999999999987543 468888887 67899999999999999999999999999999
Q ss_pred hHHHHhhhcccCceeEEEEEEEeecCCCChhhHhhccCceeeeccCCcccCccchhhhhhhhhcCcchhhhhhhhHHHHH
Q psy9448 173 TAATLMNAHSSRSHTIFTITIHIKDNSLDGEELLRTGKLNLVDLAGSENIGRSGAQDKRAREAGNINQSLLTLGRCITAL 252 (583)
Q Consensus 173 ~~~t~~n~~SSRSH~i~~i~i~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~~~~~~~~~~E~~~In~SL~~L~~vi~aL 252 (583)
+++|.||..|||||+||+|+|++.....++......|+|+|||||||||..++++.|.+++|+.+||+||++|++||.+|
T Consensus 216 ~~~T~~N~~SSRSH~If~i~v~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL 295 (372)
T 3b6u_A 216 VGATNMNEHSSRSHAIFVITIECSEVGLDGENHIRVGKLNLVDLAGSERQAKTGAQGERLKEATKINLSLSALGNVISAL 295 (372)
T ss_dssp TTCSSHHHHHHTSEEEEEEEEEEEC-----CCCEEEEEEEEEECCCCCE----------EEEGGGCCHHHHHHHHHHHHH
T ss_pred cccccCCCCCCcceEEEEEEEEEeecCCCCCcceEEEEEEEEECCCCccccccCcchhhhhhHhhhhhhHHHHHHHHHHH
Confidence 99999999999999999999998764444444456799999999999999999999999999999999999999999999
Q ss_pred hhhC-CCCCcchhhHhHHhhhhcCCcceeeEEEEeCccccchhhhhhhhhhhhhhccCCCchhhhhhhhHHHHHHHHH
Q psy9448 253 VEKT-PHIPYRESKLTRLLQDSLGGRTKTSIIATVSPAQLNMEETLSTLDYAHRAKNITNRPEINQKMSKKALLRVTS 329 (583)
Q Consensus 253 ~~~~-~~ipyR~SkLT~lL~d~Lggn~~t~~I~~vsp~~~~~~eTl~TL~fa~r~k~i~n~~~~n~~~~~~~~~~~~~ 329 (583)
++++ .||||||||||+||||+||||++|+||+||||+..+++||++||+||+|||+|+|+|.+|+++. ++++++|+
T Consensus 296 ~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~vsP~~~~~~ETlsTLrfA~rak~I~n~~~~n~~~~-~~~~~~~~ 372 (372)
T 3b6u_A 296 VDGKSTHIPYRDSKLTRLLQDSLGGNAKTVMVANVGPASYNVEETLTTLRYANRAKNIKNKPRVNEDPK-DALLREFQ 372 (372)
T ss_dssp HCC---CCCGGGSHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTCBCCCCCCC------------
T ss_pred hcCCCCCCcccccHHHHHHHHhcCCCccEEEEEEeCCcccCHHHHHHHHHHHHHHhhccccceecCChH-HHHHHhcC
Confidence 9864 6999999999999999999999999999999999999999999999999999999999999864 47777653
No 4
>2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster}
Probab=100.00 E-value=6.7e-83 Score=668.42 Aligned_cols=306 Identities=64% Similarity=1.008 Sum_probs=262.5
Q ss_pred eeeeeehhhcccCCceEEEeehhhhhhHHHHhcccceeEEEeeccCCCceEEeecccCCCCCCCcccCCCCccchhhhhH
Q psy9448 13 MVVSVMFLVCIFYTTIVDVYKYVVNPLIDEVLSGYNCTVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNH 92 (583)
Q Consensus 13 ~~~~~~D~Vf~~~~tq~~vy~~~~~plv~~~l~G~n~~i~ayGqtgSGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~ 92 (583)
...|.||+||+++++|++||+.+++|+|+++|+|||+||||||||||||||||+|....+....+.+....|||||++++
T Consensus 66 ~~~F~FD~vf~~~~~Q~~Vy~~~~~plv~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~~~~~~~~~~~~~Giipr~~~~ 145 (373)
T 2wbe_C 66 TKKFTFDRSFGPESKQCDVYSVVVSPLIEEVLNGYNCTVFAYGQTGTGKTHTMVGNETAELKSSWEDDSDIGIIPRALSH 145 (373)
T ss_dssp CEEEECSEEECTTCCHHHHHHHHHHHHHHHHHHTCCEEEEEECSTTSSHHHHHTBSCSCCSSSCSSCTTTBCHHHHHHHH
T ss_pred ceEEeccEEeccccchhHHHHHHHHHHHHHHhCCceEEEEeecCCCCCcceecccCccccccccccccCCCcChHHHHHH
Confidence 35688999999999999999999999999999999999999999999999999998764433344455678999999999
Q ss_pred HHHHHhhccceeEEEEEeehhhchHHhhhhcCCCCccceEEeeeccccccceEEeccceeeecchhHHHHHHHhcchhhh
Q psy9448 93 LFDELRLLGDAEFTVRVSFLEIYNEELIDLLSPTDDITKLRLFEDSARKGSVIIQGLEEKAVHNKDEVYKILEKGSQKRQ 172 (583)
Q Consensus 93 lf~~~~~~~~~~~~v~vS~~EIyne~v~DLL~~~~~~~~l~i~~~~~~~~~~~v~~l~~~~v~s~~e~~~ll~~g~~~R~ 172 (583)
||+.++.. +.+|.|+|||+|||||+|+|||++... ..+++++++..+++++|+|++++.|.|++|++++|..|.++|+
T Consensus 146 lF~~i~~~-~~~~~v~vS~~EIYnE~i~DLL~~~~~-~~l~i~~~~~~~g~v~v~gl~~~~V~s~~e~~~ll~~g~~~R~ 223 (373)
T 2wbe_C 146 LFDELRMM-EVEYTMRISYLELYNEELCDLLSTDDT-TKIRIFDDSTKKGSVIIQGLEEIPVHSKDDVYKLLEKGKERRK 223 (373)
T ss_dssp HHHHHHHC-CSCEEEEEEEEEEETTEEEESSCTTSC-SCCCEEECSSSSSCEEETTCCCEEESSHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhc-CceEEEEEEEEEEeCCeEEECCCCCCC-CCceeEeccCCCCcEEecCceEEccCCHHHHHHHHHHHhhhhc
Confidence 99999764 468999999999999999999987543 5678888876678999999999999999999999999999999
Q ss_pred hHHHHhhhcccCceeEEEEEEEeecCCCChhhHhhccCceeeeccCCcccCccchh-hhhhhhhcCcchhhhhhhhHHHH
Q psy9448 173 TAATLMNAHSSRSHTIFTITIHIKDNSLDGEELLRTGKLNLVDLAGSENIGRSGAQ-DKRAREAGNINQSLLTLGRCITA 251 (583)
Q Consensus 173 ~~~t~~n~~SSRSH~i~~i~i~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~~~~~-~~~~~E~~~In~SL~~L~~vi~a 251 (583)
+++|.||..|||||+||+|+|+......++....+.|+|+|||||||||..++++. |.|++|+.+||+||++|++||.+
T Consensus 224 ~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~~g~rl~E~~~INkSL~aLg~vI~a 303 (373)
T 2wbe_C 224 TATTLMNAQSSRSHTVFSIVVHIRENGIEGEDMLKIGKLNLVDLAGSENVSKAGNEKGIRVRETVNINQSLLTLGRVITA 303 (373)
T ss_dssp TTCSCHHHHHHHSEEEEEEEEEECTTCTTTCCEEEEEEEEEEECCCC--------------------CHHHHHHHHHHHH
T ss_pred cccccCCCCCCCccEEEEEEEEEecCCCCCCcceeEEEEEEEECCCCCccccccCccccchhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999997765444444556799999999999999999987 99999999999999999999999
Q ss_pred HhhhCCCCCcchhhHhHHhhhhcCCcceeeEEEEeCccccchhhhhhhhhhhhhhccCCCchhhhhhhh
Q psy9448 252 LVEKTPHIPYRESKLTRLLQDSLGGRTKTSIIATVSPAQLNMEETLSTLDYAHRAKNITNRPEINQKMS 320 (583)
Q Consensus 252 L~~~~~~ipyR~SkLT~lL~d~Lggn~~t~~I~~vsp~~~~~~eTl~TL~fa~r~k~i~n~~~~n~~~~ 320 (583)
|+++..||||||||||+||||+||||++|+||+||||+..+++||++||+||+|||+|+|+|.+|++++
T Consensus 304 L~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETlsTLrfA~rak~I~n~p~vN~~~s 372 (373)
T 2wbe_C 304 LVDRAPHVPYRESKLTRLLQESLGGRTKTSIIATISPGHKDIEETLSTLEYAHRAKNIQNKPEVNQKLT 372 (373)
T ss_dssp HHHCSSCCCGGGCHHHHHTHHHHHSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCEECCCCCEECC
T ss_pred HHcCCCcCccccchHHHHHHHHhCCCceEEEEEEeCCCcccHHHHHHHHHHHHHHhhccccceeccccC
Confidence 999999999999999999999999999999999999999999999999999999999999999998764
No 5
>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.8e-82 Score=663.06 Aligned_cols=294 Identities=38% Similarity=0.604 Sum_probs=236.1
Q ss_pred eeeeehhhcccCCceEEEeehhhhhhHHHHhcccceeEEEeeccCCCceEEeecccCCCCCCCcccCCCCccchhhhhHH
Q psy9448 14 VVSVMFLVCIFYTTIVDVYKYVVNPLIDEVLSGYNCTVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHL 93 (583)
Q Consensus 14 ~~~~~D~Vf~~~~tq~~vy~~~~~plv~~~l~G~n~~i~ayGqtgSGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~l 93 (583)
..|.||+||+++++|++||+.+++|+|+++++|||+||||||||||||||||+|++.. +|||||++++|
T Consensus 65 ~~f~FD~Vf~~~~tQ~~Vy~~~~~plv~~~l~G~N~tifAYGqTGSGKTyTM~G~~~~-----------~Giipra~~~l 133 (388)
T 3bfn_A 65 LKYQFDAFYGERSTQQDIYAGSVQPILRHLLEGQNASVLAYGPTGAGKTHTMLGSPEQ-----------PGVIPRALMDL 133 (388)
T ss_dssp EEEECSEEECTTCCHHHHHHHHTGGGHHHHTTTCCEEEEEESCTTSSHHHHHTBCSSS-----------BCHHHHHHHHH
T ss_pred eEEEcceEecCCCCHhHHHHHHHHHHHHHhhcCceeeEeeecCCCCCCCeEeecCccc-----------cchhHHHHHHH
Confidence 5678999999999999999999999999999999999999999999999999997643 49999999999
Q ss_pred HHHHhhc----cceeEEEEEeehhhchHHhhhhcCCCCccceEEeeeccccccceEEeccceeeecchhHHHHHHHhcch
Q psy9448 94 FDELRLL----GDAEFTVRVSFLEIYNEELIDLLSPTDDITKLRLFEDSARKGSVIIQGLEEKAVHNKDEVYKILEKGSQ 169 (583)
Q Consensus 94 f~~~~~~----~~~~~~v~vS~~EIyne~v~DLL~~~~~~~~l~i~~~~~~~~~~~v~~l~~~~v~s~~e~~~ll~~g~~ 169 (583)
|+.++.. ....|.|++||+|||||+|+|||++.. ..+.+++++ .++++|.|++++.|.|++|++++|..|.+
T Consensus 134 F~~i~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~~--~~l~ired~--~~~v~v~gl~~~~V~s~~e~~~ll~~g~~ 209 (388)
T 3bfn_A 134 LQLTREEGAEGRPWALSVTMSYLEIYQEKVLDLLDPAS--GDLVIREDC--RGNILIPGLSQKPISSFADFERHFLPASR 209 (388)
T ss_dssp HHHHHHHTSTTCSEEEEEEEEEEEEETTEEEESSSCSS--CBCCCEECT--TSCEECTTCCCEECCSHHHHHHHHHHHTC
T ss_pred HHHHHHhhccCCCceEEEEEEEEEEECCeeeehhccCC--CCceEEEcC--CCCEEeccceEEEeCCHHHHHHHHHHHhh
Confidence 9998753 356899999999999999999998764 467888887 67899999999999999999999999999
Q ss_pred hhhhHHHHhhhcccCceeEEEEEEEeecCCCChhhHhhccCceeeeccCCcccCccchhhhhhhhhcCcchhhhhhhhHH
Q psy9448 170 KRQTAATLMNAHSSRSHTIFTITIHIKDNSLDGEELLRTGKLNLVDLAGSENIGRSGAQDKRAREAGNINQSLLTLGRCI 249 (583)
Q Consensus 170 ~R~~~~t~~n~~SSRSH~i~~i~i~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~~~~~~~~~~E~~~In~SL~~L~~vi 249 (583)
+|++++|.||..|||||+||+|+|++....... ....|+|+|||||||||..++++.|.+++|+.+||+||++||+||
T Consensus 210 ~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~~--~~~~skL~lVDLAGSEr~~~t~~~g~rlkE~~~INkSL~aLg~vI 287 (388)
T 3bfn_A 210 NRTVGATRLNQRSSRSHAVLLVKVDQRERLAPF--RQREGKLYLIDLAGSEDNRRTGNKGLRLKESGAINTSLFVLGKVV 287 (388)
T ss_dssp -----------CGGGSEEEEEEEEEEEESSTTC--CEEEEEEEEEECCCTTC--------------CCCCHHHHHHHHHH
T ss_pred ccccccccCCCCCCCCeEEEEEEEEEeccCCCC--ceeEEEEEEEECCCCcccccccCccchhHHHhHhhhhHHHHHHHH
Confidence 999999999999999999999999876543211 135689999999999999999999999999999999999999999
Q ss_pred HHHhhhCCCCCcchhhHhHHhhhhcCCcceeeEEEEeCccccchhhhhhhhhhhhhhccCCCchhhhhhhhHHHH
Q psy9448 250 TALVEKTPHIPYRESKLTRLLQDSLGGRTKTSIIATVSPAQLNMEETLSTLDYAHRAKNITNRPEINQKMSKKAL 324 (583)
Q Consensus 250 ~aL~~~~~~ipyR~SkLT~lL~d~Lggn~~t~~I~~vsp~~~~~~eTl~TL~fa~r~k~i~n~~~~n~~~~~~~~ 324 (583)
.+|+++..||||||||||+||||+||||++|+||+||||+..+++||++||+||+|||+|+|+|.+|++++..++
T Consensus 288 ~aL~~~~~hVPYRdSkLTrlLqdsLgGnskT~mIa~iSP~~~~~~ETlsTLrfA~rak~I~n~p~~n~~~~~~~l 362 (388)
T 3bfn_A 288 DALNQGLPRVPYRDSKLTRLLQDSLGGSAHSILIANIAPERRFYLDTVSALNFAARSKEVINRPFTNESLQPHAL 362 (388)
T ss_dssp HHHHTTCSCCCGGGSHHHHHTTTSSSTTCEEEEEEEECCSGGGHHHHHHHHHHHCSEEEEC--------------
T ss_pred HHHhcCCCCCcCcccHHHHHHHHhhCCCccEEEEEEECCccccHHHHHHHHHHHHHHhhCcCcCcccCCCCHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999887665
No 6
>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A*
Probab=100.00 E-value=5.6e-82 Score=659.07 Aligned_cols=307 Identities=38% Similarity=0.596 Sum_probs=276.8
Q ss_pred eeeeehhhcccCCceEEEeehhhhhhHHHHhcccceeEEEeeccCCCceEEeecccCCCCCCCcccCCCCccchhhhhHH
Q psy9448 14 VVSVMFLVCIFYTTIVDVYKYVVNPLIDEVLSGYNCTVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHL 93 (583)
Q Consensus 14 ~~~~~D~Vf~~~~tq~~vy~~~~~plv~~~l~G~n~~i~ayGqtgSGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~l 93 (583)
..|.||+||+++++|++||+. ++|+|+++++|||+||||||||||||||||+|++.. +|||||++++|
T Consensus 47 ~~f~FD~Vf~~~~~Q~~Vy~~-~~~lv~~~l~G~n~tifAYGqTGSGKTyTM~G~~~~-----------~Giipr~~~~l 114 (369)
T 3cob_A 47 KQHMYDRVFDGNATQDDVFED-TKYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGADSN-----------PGLTPRAMSEL 114 (369)
T ss_dssp EEEECSEEECTTCCHHHHHHT-TTHHHHHHHTTCEEEEEEEECTTSSHHHHHTBCSSS-----------BCHHHHHHHHH
T ss_pred eEEecCEEECCCCCcceehhh-hhhhhHhhhcCCceEEEEECCCCCCCeEeecCCCCC-----------CchhHHHHHHH
Confidence 567899999999999999999 699999999999999999999999999999998643 49999999999
Q ss_pred HHHHhhccc-eeEEEEEeehhhchHHhhhhcCCCCc-cceEEeeeccccccceEEeccceeeecchhHHHHHHHhcchhh
Q psy9448 94 FDELRLLGD-AEFTVRVSFLEIYNEELIDLLSPTDD-ITKLRLFEDSARKGSVIIQGLEEKAVHNKDEVYKILEKGSQKR 171 (583)
Q Consensus 94 f~~~~~~~~-~~~~v~vS~~EIyne~v~DLL~~~~~-~~~l~i~~~~~~~~~~~v~~l~~~~v~s~~e~~~ll~~g~~~R 171 (583)
|+.++...+ ..|.|++||+|||||+|+|||+|... ...+.+++++ .++++|+|++++.|.|++|++++|..|.++|
T Consensus 115 F~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~l~i~e~~--~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R 192 (369)
T 3cob_A 115 FRIMKKDSNKFSFSLKAYMVELYQDTLVDLLLPKQAKRLKLDIKKDS--KGMVSVENVTVVSISTYEELKTIIQRGSEQR 192 (369)
T ss_dssp HHHHHHTTTTEEEEEEEEEEEECSSCEEESSCCSSSCCCCCEEEECT--TSCEEEETCCCEEECSHHHHHHHHHHHHHHT
T ss_pred HHHHHhhccCceeEEEEEEEEEeCceeeecCCCcccCCcceEEEECC--CCCEEccCCEEEEeCCHHHHHHHHHHHhhcc
Confidence 999987654 68999999999999999999998643 3578898887 6789999999999999999999999999999
Q ss_pred hhHHHHhhhcccCceeEEEEEEEeecCCCChhhHhhccCceeeeccCCcccCccchhhhhhhhhcCcchhhhhhhhHHHH
Q psy9448 172 QTAATLMNAHSSRSHTIFTITIHIKDNSLDGEELLRTGKLNLVDLAGSENIGRSGAQDKRAREAGNINQSLLTLGRCITA 251 (583)
Q Consensus 172 ~~~~t~~n~~SSRSH~i~~i~i~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~~~~~~~~~~E~~~In~SL~~L~~vi~a 251 (583)
++++|.||..|||||+||+|+|++..... .....|+|+|||||||||..++++.|.+++|+.+||+||++||+||.+
T Consensus 193 ~~~~T~~N~~SSRSH~if~i~v~~~~~~~---~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~a 269 (369)
T 3cob_A 193 HTTGTLMNEQSSRSHLIVSVIIESTNLQT---QAIARGKLSFVDLAGSERVKKSGSAGNQLKEAQSINKSLSALGDVISA 269 (369)
T ss_dssp CCCSCCTTCHHHHSEEEEEEEEEEEETTT---CCEEEEEEEEEECCCSSCCCCCSSCSHHHHHHHHHTHHHHHHHHHHHH
T ss_pred eeecccCCCCCCcceEEEEEEEEEecCCC---CcEEEEEEEEEeCCCCCcccccCccchhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998765322 234579999999999999999999999999999999999999999999
Q ss_pred HhhhCCCCCcchhhHhHHhhhhcCCcceeeEEEEeCccccchhhhhhhhhhhhhhccCCCchhhhhhhhHHHHHHHHHHH
Q psy9448 252 LVEKTPHIPYRESKLTRLLQDSLGGRTKTSIIATVSPAQLNMEETLSTLDYAHRAKNITNRPEINQKMSKKALLRVTSIN 331 (583)
Q Consensus 252 L~~~~~~ipyR~SkLT~lL~d~Lggn~~t~~I~~vsp~~~~~~eTl~TL~fa~r~k~i~n~~~~n~~~~~~~~~~~~~~e 331 (583)
|+++..||||||||||+||||+||||++|+||+||||+..+++||++||+||+|||+|+|.|.+|++. +|
T Consensus 270 L~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETl~TLrfA~rak~i~~~~~~n~~~----------~e 339 (369)
T 3cob_A 270 LSSGNQHIPYRNHKLTMLMSDSLGGNAKTLMFVNISPAESNLDETHNSLTYASRVRSIVNDPSKNVSS----------KE 339 (369)
T ss_dssp HHTTCSCCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCBCCCCCCEEC----------HH
T ss_pred HhcCCCcCCCcCCHHHHHHHHhcCCCccEEEEEEeCCccccHHHHHHHHHHHHHHhhcccCCcccCCH----------HH
Confidence 99999999999999999999999999999999999999999999999999999999999999999886 34
Q ss_pred HHHhhhhhhhHhhhccC
Q psy9448 332 MEETLSTLDYAHRAKNI 348 (583)
Q Consensus 332 ~~~~l~~~~~~~~~~~~ 348 (583)
+.+ ||+++...+++.+
T Consensus 340 i~~-L~~~l~~~~~~~~ 355 (369)
T 3cob_A 340 VAR-LKKLVSYWKEQAG 355 (369)
T ss_dssp HHH-HHHHTTCC-----
T ss_pred HHH-HHHHHHHHHHhcC
Confidence 445 5555554444433
No 7
>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis}
Probab=100.00 E-value=1.1e-81 Score=653.12 Aligned_cols=291 Identities=46% Similarity=0.691 Sum_probs=245.0
Q ss_pred eeeeeehhhcccCCceEEEeehhhhhhHHHHhcccceeEEEeeccCCCceEEeecccCCCCCCCcccCCCCccchhhhhH
Q psy9448 13 MVVSVMFLVCIFYTTIVDVYKYVVNPLIDEVLSGYNCTVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNH 92 (583)
Q Consensus 13 ~~~~~~D~Vf~~~~tq~~vy~~~~~plv~~~l~G~n~~i~ayGqtgSGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~ 92 (583)
...|.||+||+++++|++||+.+++|+|+++++|||+||||||||||||||||+|++.. +|||||++++
T Consensus 55 ~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~-----------~Giipr~~~~ 123 (350)
T 2vvg_A 55 PRTFTFDAVYDQTSCNYGIFQASFKPLIDAVLEGFNSTIFAYGQTGAGKTWTMGGNKEE-----------PGAIPNSFKH 123 (350)
T ss_dssp -EEEECSEEECTTCCHHHHHHHTTHHHHHHHHTTCCEEEEEECSTTSSHHHHHTBCSSS-----------BCHHHHHHHH
T ss_pred ceEeeCCEEECCCcchhHHHHHHHHHHHHHHhCCCceeEEeecCCCCCCCEEeecCCcc-----------CchHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999997643 4999999999
Q ss_pred HHHHHhh-ccceeEEEEEeehhhchHHhhhhcCCCCccceEEeeeccccccceEEeccceeeecchhHHHHHHHhcchhh
Q psy9448 93 LFDELRL-LGDAEFTVRVSFLEIYNEELIDLLSPTDDITKLRLFEDSARKGSVIIQGLEEKAVHNKDEVYKILEKGSQKR 171 (583)
Q Consensus 93 lf~~~~~-~~~~~~~v~vS~~EIyne~v~DLL~~~~~~~~l~i~~~~~~~~~~~v~~l~~~~v~s~~e~~~ll~~g~~~R 171 (583)
||+.++. ..+..|.|++||+|||||+|+|||++ ..++.+++++ .++++|.|++++.|.+++|++++|..|.++|
T Consensus 124 lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~---~~~l~i~e~~--~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R 198 (350)
T 2vvg_A 124 LFDAINSSSSNQNFLVIGSYLELYNEEIRDLIKN---NTKLPLKEDK--TRGIYVDGLSMHRVTTAAELSALMDKGFANR 198 (350)
T ss_dssp HHHHHHTCCTTEEEEEEEEEEEEETTEEEETTTT---EEEECEEEET--TTEEEETTCCCEEESSHHHHHHHHHHHHHHC
T ss_pred HHHHHHhhccCCcEEEEEEEEEEeCCEEEEcccC---CcCceeeEcC--CCCEEecCCEEEEcCCHHHHHHHHHHHHhcc
Confidence 9999984 45678999999999999999999984 3578888887 6789999999999999999999999999999
Q ss_pred hhHHHHhhhcccCceeEEEEEEEeecCCCChhhHhhccCceeeeccCCcccCccchhhhhhhhhcCcchhhhhhhhHHHH
Q psy9448 172 QTAATLMNAHSSRSHTIFTITIHIKDNSLDGEELLRTGKLNLVDLAGSENIGRSGAQDKRAREAGNINQSLLTLGRCITA 251 (583)
Q Consensus 172 ~~~~t~~n~~SSRSH~i~~i~i~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~~~~~~~~~~E~~~In~SL~~L~~vi~a 251 (583)
++++|.||..|||||+||+|+|++.... ++......|+|+|||||||||..++++.|.+++|+.+||+||++||+||.+
T Consensus 199 ~~~~T~~N~~SSRSH~if~i~v~~~~~~-~~~~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~a 277 (350)
T 2vvg_A 199 HVAATQMNDTSSRSHSIFMVRIECSEVI-ENKEVIRVGKLNLVDLAGSERQSKTGATGETLVEGAKINLSLSALGLVISK 277 (350)
T ss_dssp ----------CTTCEEEEEEEEEEEEC-----CEEEEEEEEEEECCCCCC---------------CTTHHHHHHHHHHHH
T ss_pred ccccccCCCCCCcceEEEEEEEEEeecc-CCCccEEEEEEEEEeCCCCCccccccccHHHHHHHHHHhHHHHHHHHHHHH
Confidence 9999999999999999999999876543 223344679999999999999999999999999999999999999999999
Q ss_pred HhhhCCCCCcchhhHhHHhhhhcCCcceeeEEEEeCccccchhhhhhhhhhhhhhccCCCchhhhhhhh
Q psy9448 252 LVEKTPHIPYRESKLTRLLQDSLGGRTKTSIIATVSPAQLNMEETLSTLDYAHRAKNITNRPEINQKMS 320 (583)
Q Consensus 252 L~~~~~~ipyR~SkLT~lL~d~Lggn~~t~~I~~vsp~~~~~~eTl~TL~fa~r~k~i~n~~~~n~~~~ 320 (583)
|++++.||||||||||+||||+||||++|+||+||||+..+++||++||+||+|||+|+|+|.+|+++.
T Consensus 278 L~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~~~~~~ETl~TL~fA~rak~i~n~~~~n~~~~ 346 (350)
T 2vvg_A 278 LVEGATHIPYRDSKLTRLLQDSLGGNSKTLMCANISPASTNYDETMSTLRYADRAKQIKNKPRINEDPK 346 (350)
T ss_dssp HHHTCSSCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTCBCCCCCCBSCT
T ss_pred HHcCCCCCCccccHHHHHHHHhcCCCccEEEEEEeCCccccHHHHHHHHHHHHHHhhccccceecCCch
Confidence 999999999999999999999999999999999999999999999999999999999999999998864
No 8
>1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens}
Probab=100.00 E-value=1.4e-81 Score=652.85 Aligned_cols=293 Identities=41% Similarity=0.643 Sum_probs=263.4
Q ss_pred eeeeehhhcccCCceEEEeehhhhhhHHHHhcccceeEEEeeccCCCceEEeecccCCCCCCCcccCCCCccchhhhhHH
Q psy9448 14 VVSVMFLVCIFYTTIVDVYKYVVNPLIDEVLSGYNCTVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHL 93 (583)
Q Consensus 14 ~~~~~D~Vf~~~~tq~~vy~~~~~plv~~~l~G~n~~i~ayGqtgSGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~l 93 (583)
..|.||+||+++++|++||+.+++|+|+++++|||+||||||||||||||||+|++.. .|||||++++|
T Consensus 44 ~~F~FD~Vf~~~~tQ~~Vy~~~~~plv~~~l~G~n~tifAYGqTGSGKTyTM~G~~~~-----------~Giipr~~~~l 112 (349)
T 1t5c_A 44 KSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGYNGTIFAYGQTASGKTYTMMGSEDH-----------LGVIPRAIHDI 112 (349)
T ss_dssp CEEECSCEECTTSCHHHHHHHTTHHHHHHHHTTCCEEEEEEESTTSSHHHHHTBCSSS-----------BCHHHHHHHHH
T ss_pred eEEECCEEECCCCCHHHHHHHHHHHHHHHHHcCCccceeeecCCCCCCCeEEecCCCC-----------CchHHHHHHHH
Confidence 3578999999999999999999999999999999999999999999999999997643 49999999999
Q ss_pred HHHHhhccceeEEEEEeehhhchHHhhhhcCCCCccceEEeeeccccccceEEeccceeeecchhHHHHHHHhcchhhhh
Q psy9448 94 FDELRLLGDAEFTVRVSFLEIYNEELIDLLSPTDDITKLRLFEDSARKGSVIIQGLEEKAVHNKDEVYKILEKGSQKRQT 173 (583)
Q Consensus 94 f~~~~~~~~~~~~v~vS~~EIyne~v~DLL~~~~~~~~l~i~~~~~~~~~~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~ 173 (583)
|+.++..++.+|.|+|||+|||||+|+|||++.....++++++++ +++++|+|++++.|.+++|++++|..|.++|++
T Consensus 113 F~~i~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~l~i~ed~--~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~ 190 (349)
T 1t5c_A 113 FQKIKKFPDREFLLRVSYMEIYNETITDLLCGTQKMKPLIIREDV--NRNVYVADLTEEVVYTSEMALKWITKGEKSRHY 190 (349)
T ss_dssp HHHGGGCTTEEEEEEEEEEEEETTEEEESSSSSCTTCCEEEEETT--TTEEEETTCCCEECSSHHHHHHHHHHHHHTTSS
T ss_pred HHHHHhCcCCcEEEEEEEEEEeCCEEEEccCCCCCCCCceEEECC--CCCEEecCCEEEEeCCHHHHHHHHHHhhccccc
Confidence 999998888999999999999999999999987766789999987 678999999999999999999999999999999
Q ss_pred HHHHhhhcccCceeEEEEEEEeecCCCC--hhhHhhccCceeeeccCCcccCccchhhhhhhhhcCcchhhhhhhhHHHH
Q psy9448 174 AATLMNAHSSRSHTIFTITIHIKDNSLD--GEELLRTGKLNLVDLAGSENIGRSGAQDKRAREAGNINQSLLTLGRCITA 251 (583)
Q Consensus 174 ~~t~~n~~SSRSH~i~~i~i~~~~~~~~--~~~~~~~s~L~~VDLAGsEr~~~~~~~~~~~~E~~~In~SL~~L~~vi~a 251 (583)
++|.||..|||||+||+|.|++...... .......|+|+|||||||||..++++.|.|++|+.+||+||++|++||.+
T Consensus 191 ~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~a 270 (349)
T 1t5c_A 191 GETKMNQRSSRSHTIFRMILESREKGEPSNCEGSVKVSHLNLVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKK 270 (349)
T ss_dssp SSSSSSCTTTTCEEEEEEEEEEEECC-------CEEEEEEEEEECCCGGGTC-------CCCSSSCCCHHHHHHHHHHHH
T ss_pred ccccCCCCCCCceEEEEEEEEEeccCCCcCcCccEEEEEEEEEECCCCccccccCCccccchhhhHHhHHHHHHHHHHHH
Confidence 9999999999999999999987654321 12234579999999999999999999999999999999999999999999
Q ss_pred HhhhC--CCCCcchhhHhHHhhhhcCCcceeeEEEEeCccccchhhhhhhhhhhhhhccCCCchhhhhhhhH
Q psy9448 252 LVEKT--PHIPYRESKLTRLLQDSLGGRTKTSIIATVSPAQLNMEETLSTLDYAHRAKNITNRPEINQKMSK 321 (583)
Q Consensus 252 L~~~~--~~ipyR~SkLT~lL~d~Lggn~~t~~I~~vsp~~~~~~eTl~TL~fa~r~k~i~n~~~~n~~~~~ 321 (583)
|++++ .||||||||||+||||+||||++|+||+||||. +++||++||+||+|||+|+|+|.+|++...
T Consensus 271 L~~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~--~~~ETlsTL~fA~rak~I~n~~~vn~~~~~ 340 (349)
T 1t5c_A 271 LSDGQVGGFINYRDSKLTRILQNSLGGNAKTRIICTITPV--SFDETLTALQFASTAKYMKNTPYVNEVSTD 340 (349)
T ss_dssp HHHTCCTTSSCGGGSHHHHHTGGGTTSSSEEEEEEEECTT--CSHHHHHHHHHHHHHTTCCCCCCCCEEC--
T ss_pred HhccCCCCCCcccccHHHHHHHHhcCCCceEEEEEEeCCC--CHHHHHHHHHHHHHHhhcccCceeccCCCC
Confidence 99875 699999999999999999999999999999997 589999999999999999999999998654
No 9
>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9
Probab=100.00 E-value=5.9e-81 Score=649.65 Aligned_cols=294 Identities=43% Similarity=0.700 Sum_probs=270.8
Q ss_pred eeeeehhhcccCCceEEEeehhhhhhHHHHhcccceeEEEeeccCCCceEEeecccCCCCCCCcccCCCCccchhhhhHH
Q psy9448 14 VVSVMFLVCIFYTTIVDVYKYVVNPLIDEVLSGYNCTVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHL 93 (583)
Q Consensus 14 ~~~~~D~Vf~~~~tq~~vy~~~~~plv~~~l~G~n~~i~ayGqtgSGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~l 93 (583)
..|.||+||+++++|++||+.+++|+|+++++|||+||||||||||||||||+|+... +...+|||||++++|
T Consensus 47 ~~f~FD~Vf~~~~~Q~~Vy~~~~~plv~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~-------~~~~~Giipr~~~~l 119 (355)
T 1goj_A 47 GSFTFDRVFDMSCKQSDIFDFSIKPTVDDILNGYNGTVFAYGQTGAGKSYTMMGTSID-------DPDGRGVIPRIVEQI 119 (355)
T ss_dssp EEEECSEEECTTCCHHHHHHHHTHHHHHHHTTTCCEEEEEECSTTSSHHHHHTBSCTT-------STTTBCHHHHHHHHH
T ss_pred cEEeeCeEECCCCccHHHHHHHHHHHHHHHhCCCcceEEEECCCCCCcceEeecCCCC-------CcccCCchHHHHHHH
Confidence 4688999999999999999999999999999999999999999999999999997532 123469999999999
Q ss_pred HHHHhhc-cceeEEEEEeehhhchHHhhhhcCCCCccceEEeeeccccccceEEeccceeeecchhHHHHHHHhcchhhh
Q psy9448 94 FDELRLL-GDAEFTVRVSFLEIYNEELIDLLSPTDDITKLRLFEDSARKGSVIIQGLEEKAVHNKDEVYKILEKGSQKRQ 172 (583)
Q Consensus 94 f~~~~~~-~~~~~~v~vS~~EIyne~v~DLL~~~~~~~~l~i~~~~~~~~~~~v~~l~~~~v~s~~e~~~ll~~g~~~R~ 172 (583)
|+.+... .+.+|.|++||+|||||+|+|||+|.. ..+.+++++ .++++|+|++++.|.|++|++++|..|.++|+
T Consensus 120 F~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~--~~l~i~e~~--~~g~~v~gl~~~~v~s~~e~~~ll~~g~~~R~ 195 (355)
T 1goj_A 120 FTSILSSAANIEYTVRVSYMEIYMERIRDLLAPQN--DNLPVHEEK--NRGVYVKGLLEIYVSSVQEVYEVMRRGGNARA 195 (355)
T ss_dssp HHHHHTSCTTEEEEEEEEEEEEETTEEEETTSTTC--CSCCEEEET--TTEEEETTCCCEECCSHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcccCceEEEEEEEEEEECCEEEEcccCcc--CCceeEEcC--CCCEeecCCEEEeCCCHHHHHHHHHHHHhhcC
Confidence 9998764 467899999999999999999999865 457788876 67899999999999999999999999999999
Q ss_pred hHHHHhhhcccCceeEEEEEEEeecCCCChhhHhhccCceeeeccCCcccCccchhhhhhhhhcCcchhhhhhhhHHHHH
Q psy9448 173 TAATLMNAHSSRSHTIFTITIHIKDNSLDGEELLRTGKLNLVDLAGSENIGRSGAQDKRAREAGNINQSLLTLGRCITAL 252 (583)
Q Consensus 173 ~~~t~~n~~SSRSH~i~~i~i~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~~~~~~~~~~E~~~In~SL~~L~~vi~aL 252 (583)
+++|.+|..|||||+||+|+|++..... .....|+|+|||||||||..++++.|.+++|+.+||+||++|++||.+|
T Consensus 196 ~~~T~~N~~SSRSH~if~i~v~~~~~~~---~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL 272 (355)
T 1goj_A 196 VAATNMNQESSRSHSIFVITITQKNVET---GSAKSGQLFLVDLAGSEKVGKTGASGQTLEEAKKINKSLSALGMVINAL 272 (355)
T ss_dssp HHHHHTTCCGGGCEEEEEEEEEEEETTT---TEEEEEEEEEEECCCCSCCTTSSSCCCCTTTTGGGTSHHHHHHHHHHHH
T ss_pred cccccCCCCCCCceEEEEEEEEEeccCC---CceeeeEEEEEECCCCCcccccccchhhHHHHHhhhhHHHHHHHHHHHH
Confidence 9999999999999999999999765432 2235799999999999999999999999999999999999999999999
Q ss_pred hhh-CCCCCcchhhHhHHhhhhcCCcceeeEEEEeCccccchhhhhhhhhhhhhhccCCCchhhhhhhhH
Q psy9448 253 VEK-TPHIPYRESKLTRLLQDSLGGRTKTSIIATVSPAQLNMEETLSTLDYAHRAKNITNRPEINQKMSK 321 (583)
Q Consensus 253 ~~~-~~~ipyR~SkLT~lL~d~Lggn~~t~~I~~vsp~~~~~~eTl~TL~fa~r~k~i~n~~~~n~~~~~ 321 (583)
+++ ..||||||||||+||||+||||++|+||+||||+..+++||++||+||+|||+|+|+|.+|++++.
T Consensus 273 ~~~~~~hvPyRdSkLT~lLqdsLgGns~t~mI~~isP~~~~~~ETl~TL~fA~rak~I~n~~~vn~~~~~ 342 (355)
T 1goj_A 273 TDGKSSHVPYRDSKLTRILQESLGGNSRTTLIINCSPSSYNDAETLSTLRFGMRAKSIKNKAKVNAELSP 342 (355)
T ss_dssp HHCSCSCCCGGGCHHHHHTGGGTTSSCEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCBCCCCCCSSSSC
T ss_pred hcCCCCCCCCccCHHHHHHHHHhCCCCcEEEEEEECcccccHHHHHHHHHHHHHHhhccCCceeCCCCCH
Confidence 986 589999999999999999999999999999999999999999999999999999999999998765
No 10
>2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C*
Probab=100.00 E-value=1.2e-79 Score=643.06 Aligned_cols=293 Identities=38% Similarity=0.615 Sum_probs=249.6
Q ss_pred eeeeeehhhcccC--------CceEEEeehhhhhhHHHHhcccceeEEEeeccCCCceEEeecccCCCCCCCcccCCCCc
Q psy9448 13 MVVSVMFLVCIFY--------TTIVDVYKYVVNPLIDEVLSGYNCTVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSG 84 (583)
Q Consensus 13 ~~~~~~D~Vf~~~--------~tq~~vy~~~~~plv~~~l~G~n~~i~ayGqtgSGKT~Tm~G~~~~~~~~~~~~~~~~G 84 (583)
...|.||+||++. ++|++||+.+++|+|+++++|||+||||||||||||||||+|... ...+|
T Consensus 47 ~~~f~FD~vf~~~~~~~~~~~asQ~~Vy~~~~~plv~~~l~G~N~tifAYGqTGSGKTyTm~G~~~---------~~~~G 117 (366)
T 2zfi_A 47 PKSFSFDYSYWSHTSPEDINYASQKQVYRDIGEEMLQHAFEGYNVCIFAYGQTGAGKSYTMMGKQE---------KDQQG 117 (366)
T ss_dssp CEEEECSEEEECSSCTTSSSCCCHHHHHHHTHHHHHHHHHTTCCEEEEEECSTTSSHHHHHTBCSG---------GGCBC
T ss_pred ceEEecceEeecCccccccccCcHHHHHHHHHHHHHHHHhcCCeeEEEEeCCCCCCCceEeeCCCc---------cCCCc
Confidence 3567899999987 899999999999999999999999999999999999999999753 12469
Q ss_pred cchhhhhHHHHHHhhc--cceeEEEEEeehhhchHHhhhhcCCCCccceEEeeeccccccceEEeccceeeecchhHHHH
Q psy9448 85 IVPRAMNHLFDELRLL--GDAEFTVRVSFLEIYNEELIDLLSPTDDITKLRLFEDSARKGSVIIQGLEEKAVHNKDEVYK 162 (583)
Q Consensus 85 iipr~~~~lf~~~~~~--~~~~~~v~vS~~EIyne~v~DLL~~~~~~~~l~i~~~~~~~~~~~v~~l~~~~v~s~~e~~~ 162 (583)
||||++++||+.++.. .+..|.|+|||+|||||+|+|||+|... ..+++++++ .++++|+|++++.|.|++|+++
T Consensus 118 iipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~v~DLL~~~~~-~~l~ire~~--~~g~~v~gl~~~~V~s~~e~~~ 194 (366)
T 2zfi_A 118 IIPQLCEDLFSRINDTTNDNMSYSVEVSYMEIYCERVRDLLNPKNK-GNLRVREHP--LLGPYVEDLSKLAVTSYNDIQD 194 (366)
T ss_dssp HHHHHHHHHHHHHHTCCCTTEEEEEEEEEEEEETTEEEETTCTTTC-SCBCEEEET--TTEEEETTCCCEECCSHHHHHH
T ss_pred cHHHHHHHHHHHHhhcccCCeeEEEEEEEEEeeCCeEEEccccccC-CCceEEEcC--CCCEEEeCCEEEEECCHHHHHH
Confidence 9999999999999875 3578999999999999999999997643 468888887 5789999999999999999999
Q ss_pred HHHhcchhhhhHHHHhhhcccCceeEEEEEEEeecCCCC-hhhHhhccCceeeeccCCcccCccchhhhhhhhhcCcchh
Q psy9448 163 ILEKGSQKRQTAATLMNAHSSRSHTIFTITIHIKDNSLD-GEELLRTGKLNLVDLAGSENIGRSGAQDKRAREAGNINQS 241 (583)
Q Consensus 163 ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~i~~~~~~~~-~~~~~~~s~L~~VDLAGsEr~~~~~~~~~~~~E~~~In~S 241 (583)
+|..|.++|++++|.||..|||||+||+|+|++...... +......|+|+|||||||||..++++.|.|++|+.+||+|
T Consensus 195 ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkS 274 (366)
T 2zfi_A 195 LMDSGNKPRTVAATNMNETSSRSHAVFNIIFTQKRHDAETNITTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKS 274 (366)
T ss_dssp HHHHHHHHHTSGGGGTTTHHHHSEEEEEEEEEEEEECTTTTCEEEEEEEEEEEECCCGGGC------CCCHHHHHHHHHH
T ss_pred HHHHHhhccccccccCCCCCCcceEEEEEEEEEecccCCCCccceeEeEEEEEeCCCCccccccCCCccchhhhhhHhHH
Confidence 999999999999999999999999999999987653221 1122356999999999999999999999999999999999
Q ss_pred hhhhhhHHHHHhhh------------CCCCCcchhhHhHHhhhhcCCcceeeEEEEeCccccchhhhhhhhhhhhhhccC
Q psy9448 242 LLTLGRCITALVEK------------TPHIPYRESKLTRLLQDSLGGRTKTSIIATVSPAQLNMEETLSTLDYAHRAKNI 309 (583)
Q Consensus 242 L~~L~~vi~aL~~~------------~~~ipyR~SkLT~lL~d~Lggn~~t~~I~~vsp~~~~~~eTl~TL~fa~r~k~i 309 (583)
|++|++||.+|+++ ..||||||||||+||||+||||++|+||+||||+..+++||++||+||+|||+|
T Consensus 275 L~aLg~vI~aL~~~~~~~~~~~~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETlsTLrfA~rak~I 354 (366)
T 2zfi_A 275 LTTLGKVISALAEMDSGPNKNKKKKKTDFIPYRDSVLTWLLRENLGGNSRTAMVAALSPADINYDETLSTLRYADRAKQI 354 (366)
T ss_dssp HHHHHHHHHHHHHHC--------------CCGGGSHHHHHTGGGSSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHhcccccccccccccCCcccccccHHHHHHHHHhCCCceEEEEEEeCCCcccHHHHHHHHHHHHHHhhc
Confidence 99999999999873 479999999999999999999999999999999999999999999999999999
Q ss_pred CCchhhhh
Q psy9448 310 TNRPEINQ 317 (583)
Q Consensus 310 ~n~~~~n~ 317 (583)
+|+|.++.
T Consensus 355 ~~~~~~~~ 362 (366)
T 2zfi_A 355 RNTVSVNH 362 (366)
T ss_dssp --------
T ss_pred cCCCCCCC
Confidence 99999875
No 11
>1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A*
Probab=100.00 E-value=2.3e-79 Score=631.12 Aligned_cols=280 Identities=42% Similarity=0.643 Sum_probs=260.1
Q ss_pred eeeehhhcccCCceEEEeehhhhhhHHHHhcccceeEEEeeccCCCceEEeecccCCCCCCCcccCCCCccchhhhhHHH
Q psy9448 15 VSVMFLVCIFYTTIVDVYKYVVNPLIDEVLSGYNCTVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHLF 94 (583)
Q Consensus 15 ~~~~D~Vf~~~~tq~~vy~~~~~plv~~~l~G~n~~i~ayGqtgSGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~lf 94 (583)
.|.||+||+++++|++||+.+++|+|+++++|||+||||||||||||||||+|...++ ...|||||++++||
T Consensus 45 ~f~FD~Vf~~~~sQ~~Vy~~~~~plv~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~~--------~~~Giipr~~~~lF 116 (325)
T 1bg2_A 45 PYAFDRVFQSSTSQEQVYNDCAKKIVKDVLEGYNGTIFAYGQTSSGKTHTMEGKLHDP--------EGMGIIPRIVQDIF 116 (325)
T ss_dssp EEECSEEECTTCCHHHHHHHHTHHHHHHHHTTCCEEEEEECSTTSSHHHHHTBSTTCT--------TTBCHHHHHHHHHH
T ss_pred EEECCeEeCCCCCHHHHHHHHhhhhHHHHhCCCeEEEEEECCCCCCCceEecccCCCc--------ccCccHHHHHHHHH
Confidence 5779999999999999999999999999999999999999999999999999976432 24699999999999
Q ss_pred HHHhhc-cceeEEEEEeehhhchHHhhhhcCCCCccceEEeeeccccccceEEeccceeeecchhHHHHHHHhcchhhhh
Q psy9448 95 DELRLL-GDAEFTVRVSFLEIYNEELIDLLSPTDDITKLRLFEDSARKGSVIIQGLEEKAVHNKDEVYKILEKGSQKRQT 173 (583)
Q Consensus 95 ~~~~~~-~~~~~~v~vS~~EIyne~v~DLL~~~~~~~~l~i~~~~~~~~~~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~ 173 (583)
+.+... .+.+|.|++||+|||||+|+|||++.. ..+++++++ +++++|+|++++.|.|++|++++|..|.++|++
T Consensus 117 ~~i~~~~~~~~~~v~vS~~EIYnE~v~DLL~~~~--~~l~i~e~~--~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~ 192 (325)
T 1bg2_A 117 NYIYSMDENLEFHIKVSYFEIYLDKIRDLLDVSK--TNLSVHEDK--NRVPYVKGCTERFVCSPDEVMDTIDEGKSNRHV 192 (325)
T ss_dssp HHHHHHCSSEEEEEEEEEEEEETTEEEESSCTTC--CSBCEEECT--TSCEEETTCCCEEECSHHHHHHHHHHHHHHTTT
T ss_pred HHHHhccCCceEEEEEEEEEEecCeeeecccCCC--CCceEEECC--CCCEEecCceEEeCCCHHHHHHHHHHHHhhCce
Confidence 999763 567899999999999999999998754 467888887 678999999999999999999999999999999
Q ss_pred HHHHhhhcccCceeEEEEEEEeecCCCChhhHhhccCceeeeccCCcccCccchhhhhhhhhcCcchhhhhhhhHHHHHh
Q psy9448 174 AATLMNAHSSRSHTIFTITIHIKDNSLDGEELLRTGKLNLVDLAGSENIGRSGAQDKRAREAGNINQSLLTLGRCITALV 253 (583)
Q Consensus 174 ~~t~~n~~SSRSH~i~~i~i~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~~~~~~~~~~E~~~In~SL~~L~~vi~aL~ 253 (583)
++|.+|..|||||+||+|+|++..... .....|+|+|||||||||..++++.|.+++|+.+||+||++|++||.+|+
T Consensus 193 ~~T~~N~~SSRSH~if~i~v~~~~~~~---~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~ 269 (325)
T 1bg2_A 193 AVTNMNEHSSRSHSIFLINVKQENTQT---EQKLSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALA 269 (325)
T ss_dssp TCSCHHHHHHHSEEEEEEEEEEEETTT---CCEEEEEEEEEECCCSCCCCCCSSSCTTSCCCCCCCHHHHHHHHHHHHHH
T ss_pred eecCCCCCCCCCeEEEEEEEEEEecCC---CcEEEEEEEEEECCCCCcccccCCccccchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998765332 22356899999999999999999999999999999999999999999999
Q ss_pred hhCCCCCcchhhHhHHhhhhcCCcceeeEEEEeCccccchhhhhhhhhhhhhhccC
Q psy9448 254 EKTPHIPYRESKLTRLLQDSLGGRTKTSIIATVSPAQLNMEETLSTLDYAHRAKNI 309 (583)
Q Consensus 254 ~~~~~ipyR~SkLT~lL~d~Lggn~~t~~I~~vsp~~~~~~eTl~TL~fa~r~k~i 309 (583)
++..||||||||||+||||+||||++|+||+||||+..+++||++||+||+|||+|
T Consensus 270 ~~~~hvPyRdSkLT~lLqdsLgGns~t~mia~vsP~~~~~~ETl~TL~fa~rak~I 325 (325)
T 1bg2_A 270 EGSTYVPYRDSKMTRILQDSLGGNCRTTIVICCSPSSYNESETKSTLLFGQRAKTI 325 (325)
T ss_dssp TTCSCCCGGGSHHHHHGGGTSSSSCEEEEEEEECCBGGGHHHHHHHHHHHHTSCCC
T ss_pred cCCCCCcccccHHHHHHHHHhCCCCcEEEEEEECCccccHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999999999999987
No 12
>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa}
Probab=100.00 E-value=1.1e-79 Score=656.23 Aligned_cols=289 Identities=39% Similarity=0.621 Sum_probs=246.7
Q ss_pred eeeeehhhccc-------CCceEEEeehhhhhhHHHHhcccceeEEEeeccCCCceEEeecccCCCCCCCcccCCCCccc
Q psy9448 14 VVSVMFLVCIF-------YTTIVDVYKYVVNPLIDEVLSGYNCTVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIV 86 (583)
Q Consensus 14 ~~~~~D~Vf~~-------~~tq~~vy~~~~~plv~~~l~G~n~~i~ayGqtgSGKT~Tm~G~~~~~~~~~~~~~~~~Gii 86 (583)
..|.||+||++ .++|++||+.+++|+|+++|+|||+||||||||||||||||+|.+.. +|||
T Consensus 96 ~~F~FD~vF~~~~~~~~~~asQ~~Vy~~~~~plv~~~l~GyN~tIfAYGQTGSGKTyTM~G~~~~-----------~GIi 164 (443)
T 2owm_A 96 KSFTFDKSFWSHNTEDEHYATQEHVYDSLGEEFLDHNFEGYHTCIFAYGQTGSGKSYTMMGTPDQ-----------PGLI 164 (443)
T ss_dssp EEEECSEEEEESCTTSTTCCCHHHHHHHHHHHHHHHHHTTCCEEEEEESSTTSSHHHHHTCCTTS-----------CCHH
T ss_pred ceEecCeEeCCCCcCCccCCCHHHHHHhhhhhHHHHhhcCCceEEEEeCCCCCCCCEEeecCCCC-----------CchH
Confidence 56789999986 48999999999999999999999999999999999999999997653 4999
Q ss_pred hhhhhHHHHHHhhc----cceeEEEEEeehhhchHHhhhhcCCCC---ccceEEeeeccccccceEEeccceeeecchhH
Q psy9448 87 PRAMNHLFDELRLL----GDAEFTVRVSFLEIYNEELIDLLSPTD---DITKLRLFEDSARKGSVIIQGLEEKAVHNKDE 159 (583)
Q Consensus 87 pr~~~~lf~~~~~~----~~~~~~v~vS~~EIyne~v~DLL~~~~---~~~~l~i~~~~~~~~~~~v~~l~~~~v~s~~e 159 (583)
||++++||+.++.. .+..|.|+|||+|||||+|+|||++.. ....+++++++ .++++|+||+++.|.+++|
T Consensus 165 pr~~~~lF~~i~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~~~~~~~~~l~ire~~--~~g~~V~gl~e~~V~s~~e 242 (443)
T 2owm_A 165 PRTCEDLFQRIASAQDETPNISYNVKVSYFEVYNEHVRDLLAPVVPNKPPYYLKVRESP--TEGPYVKDLTEVPVRGLEE 242 (443)
T ss_dssp HHHHHHHHHHHHHTTTTSTTCEEEEEEEEEEEETTEEEETTSCCCSSCCCCCCEEEEET--TTEEEEETCCCEECCSHHH
T ss_pred HHHHHHHHHHHHhhhcccCCceEEEEEEEEEEECCEeeEccCccccCCcccccceeECC--CCCEeccCCEEEEcCCHHH
Confidence 99999999999864 467899999999999999999998743 22468999987 6789999999999999999
Q ss_pred HHHHHHhcchhhhhHHHHhhhcccCceeEEEEEEEeecCCC-ChhhHhhccCceeeeccCCcccCccchhhhhhhhhcCc
Q psy9448 160 VYKILEKGSQKRQTAATLMNAHSSRSHTIFTITIHIKDNSL-DGEELLRTGKLNLVDLAGSENIGRSGAQDKRAREAGNI 238 (583)
Q Consensus 160 ~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~i~~~~~~~-~~~~~~~~s~L~~VDLAGsEr~~~~~~~~~~~~E~~~I 238 (583)
++++|..|.++|++++|.||..|||||+||+|+|++..... .+....+.|+|+|||||||||..++++.|.|++|+.+|
T Consensus 243 ~~~ll~~G~~~R~~~~T~~N~~SSRSH~Ifti~v~~~~~~~~~~~~~~~~skL~lVDLAGSER~~~t~~~g~rlkE~~~I 322 (443)
T 2owm_A 243 IIRWMRIGDGSRTVASTKMNDTSSRSHAVFTIMLKQIHHDLETDDTTERSSRIRLVDLAGSERAKSTEATGQRLREGSNI 322 (443)
T ss_dssp HHHHHHHHHTTSCBCSSSSSCBCTTEEEEEEEEEEEEC-------CCEEEEEEEEEECCCCCC--------------CCS
T ss_pred HHHHHHHHHhhCCcccCcCCCccCCCeEEEEEEEEEeecccCCCCcceEEEEEEEEECCCCccccccCCccccccchhhh
Confidence 99999999999999999999999999999999998764321 12223457999999999999999999999999999999
Q ss_pred chhhhhhhhHHHHHhhhC----------------------CCCCcchhhHhHHhhhhcCCcceeeEEEEeCccccchhhh
Q psy9448 239 NQSLLTLGRCITALVEKT----------------------PHIPYRESKLTRLLQDSLGGRTKTSIIATVSPAQLNMEET 296 (583)
Q Consensus 239 n~SL~~L~~vi~aL~~~~----------------------~~ipyR~SkLT~lL~d~Lggn~~t~~I~~vsp~~~~~~eT 296 (583)
|+||++||+||.+|+++. .||||||||||+||||+||||++|+||+||||+ +++||
T Consensus 323 NkSL~aLg~vI~aL~~~~~~~~~~~~~~~~g~~~~~~~~~~hVPYRdSkLTrLLqdsLgGnskT~mIa~iSP~--~~~ET 400 (443)
T 2owm_A 323 NKSLTTLGRVIAALADPKSSASRPSSPVKSGRGRTPGPANSVVPYRDSVLTWLLKDSLGGNSKTAMIACISPT--DYDET 400 (443)
T ss_dssp SHHHHHHHHHHHHHCC-------------------------CCCGGGSHHHHHSTTTTTSSCEEEEEEEECSS--CHHHH
T ss_pred cHHHHHHHHHHHHHhcccccccccccccccccccccccCCCcccCcccHhHHHHHHhhCCCCcEEEEEEeccc--cHHHH
Confidence 999999999999998643 389999999999999999999999999999997 59999
Q ss_pred hhhhhhhhhhccCCCchhhhh
Q psy9448 297 LSTLDYAHRAKNITNRPEINQ 317 (583)
Q Consensus 297 l~TL~fa~r~k~i~n~~~~n~ 317 (583)
++||+||+|||+|+|+|.+|+
T Consensus 401 lsTLrfA~rak~I~n~~~vN~ 421 (443)
T 2owm_A 401 LSTLRYADQAKRIRTRAVVNQ 421 (443)
T ss_dssp HHHHHHHHHHTTCEECCCCCC
T ss_pred HHHHHHHHHHhhccccceecc
Confidence 999999999999999999998
No 13
>3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} SCOP: c.37.1.0
Probab=100.00 E-value=5.3e-79 Score=635.61 Aligned_cols=280 Identities=41% Similarity=0.651 Sum_probs=233.7
Q ss_pred eeeeehhhcccCCceEEEeehhhhhhHHHHhcccceeEEEeeccCCCceEEeecccCCCCCCCcccCCCCccchhhhhHH
Q psy9448 14 VVSVMFLVCIFYTTIVDVYKYVVNPLIDEVLSGYNCTVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHL 93 (583)
Q Consensus 14 ~~~~~D~Vf~~~~tq~~vy~~~~~plv~~~l~G~n~~i~ayGqtgSGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~l 93 (583)
..|.||+||+++++|++||+.+++|+|+++++|||+||||||||||||||||+|++.. +|||||++++|
T Consensus 72 ~~F~FD~vf~~~~~Q~~Vy~~~~~plv~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~-----------~Giipr~~~~l 140 (355)
T 3lre_A 72 LKFVFDAVFDETSTQSEVFEHTTKPILRSFLNGYNCTVLAYGATGAGKTHTMLGSADE-----------PGVMYLTMLHL 140 (355)
T ss_dssp EEEECSEEECTTCCHHHHHHTTHHHHHHHHTTTCCEEEEEECCTTSSHHHHHTBCSSS-----------BCHHHHHHHHH
T ss_pred ceEEeceEECCCCChHHHHHHHHHHHHHHHhCCCceEEEEeCCCCCCceeeeccCCCC-----------CCeeehhhhHH
Confidence 3578999999999999999999999999999999999999999999999999997653 49999999999
Q ss_pred HHHHhhc-cceeEEEEEeehhhchHHhhhhcCCCCccceEEeeeccccccceEEeccceeeecchhHHHHHHHhcchhhh
Q psy9448 94 FDELRLL-GDAEFTVRVSFLEIYNEELIDLLSPTDDITKLRLFEDSARKGSVIIQGLEEKAVHNKDEVYKILEKGSQKRQ 172 (583)
Q Consensus 94 f~~~~~~-~~~~~~v~vS~~EIyne~v~DLL~~~~~~~~l~i~~~~~~~~~~~v~~l~~~~v~s~~e~~~ll~~g~~~R~ 172 (583)
|+.++.. .+..|.|.|||+|||||+|+|||.+. .++++++++ .++++|+|++++.|.|++|++++|..|.++|+
T Consensus 141 f~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~---~~l~ire~~--~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~ 215 (355)
T 3lre_A 141 YKCMDEIKEEKICSTAVSYLEVYNEQIRDLLVNS---GPLAVREDT--QKGVVVHGLTLHQPKSSEEILHLLDNGNKNRT 215 (355)
T ss_dssp HHHHHHTTTTEEEEEEEEEEEEETTEEEESSSCC---CCBEEEECT--TSCEEEETCCCBCCCSHHHHHHHHHHHHHTSC
T ss_pred HHhhhhhccCceEEEEEEEEEEECCEEEECcCCC---CCceeEEcC--CCCEEeeeeeEEecCCHHHHHHHHHHHHhcCC
Confidence 9999875 45689999999999999999999864 368888887 67899999999999999999999999999999
Q ss_pred hHHHHhhhcccCceeEEEEEEEeecCCCChhhHhhccCceeeeccCCcccCccchhhhhhhhhcCcchhhhhhhhHHHHH
Q psy9448 173 TAATLMNAHSSRSHTIFTITIHIKDNSLDGEELLRTGKLNLVDLAGSENIGRSGAQDKRAREAGNINQSLLTLGRCITAL 252 (583)
Q Consensus 173 ~~~t~~n~~SSRSH~i~~i~i~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~~~~~~~~~~E~~~In~SL~~L~~vi~aL 252 (583)
+++|.||..|||||+||+|+|++.............|+|+|||||||||..++++.|.|++|+.+||+||++||+||.||
T Consensus 216 ~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL 295 (355)
T 3lre_A 216 QHPTDMNATSSRSHAVFQIYLRQQDKTASINQNVRIAKMSLIDLAGSERASTSGAKGTRFVEGTNINRSLLALGNVINAL 295 (355)
T ss_dssp BC-----CBCTTCEEEEEEEEEEEETTSCTTCCCCCEEEEEEECCCCCC-----------------CHHHHHHHHHHHHH
T ss_pred cccccCcCCCCCCcEEEEEEEEEecCCCCCCCCEEEEEEEEEECCCCCcCcCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998765444344456799999999999999999999999999999999999999999999
Q ss_pred hhh---CCCCCcchhhHhHHhhhhcCCcceeeEEEEeCccccchhhhhhhhhhhhhhccC
Q psy9448 253 VEK---TPHIPYRESKLTRLLQDSLGGRTKTSIIATVSPAQLNMEETLSTLDYAHRAKNI 309 (583)
Q Consensus 253 ~~~---~~~ipyR~SkLT~lL~d~Lggn~~t~~I~~vsp~~~~~~eTl~TL~fa~r~k~i 309 (583)
+++ ..||||||||||+||||+|||||+|+||+||||+..+++||++||+||+|||+|
T Consensus 296 ~~~~~~~~hiPyRdSkLT~lL~dsLgGnskt~mIa~isP~~~~~~ETl~TL~fA~rak~I 355 (355)
T 3lre_A 296 ADSKRKNQHIPYRNSKLTRLLKDSLGGNCQTIMIAAVSPSSVFYDDTYNTLKYANRAKDI 355 (355)
T ss_dssp C--------CCGGGSHHHHHTTTTSSTTSEEEEEEEECCBGGGHHHHHHHHHHHHHTC--
T ss_pred HhccCCCCcCCcccCHHHHHHHHhcCCCceEEEEEEeCCchhhHHHHHHHHHHHHHhccC
Confidence 874 359999999999999999999999999999999999999999999999999986
No 14
>4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} SCOP: c.37.1.0 PDB: 2xt3_A*
Probab=100.00 E-value=1e-78 Score=632.04 Aligned_cols=287 Identities=43% Similarity=0.633 Sum_probs=238.8
Q ss_pred eeeeehhhcccCCceEEEeehhhhhhHHHHhcccceeEEEeeccCCCceEEeecccCCCCCCCcccCCCCccchhhhhHH
Q psy9448 14 VVSVMFLVCIFYTTIVDVYKYVVNPLIDEVLSGYNCTVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHL 93 (583)
Q Consensus 14 ~~~~~D~Vf~~~~tq~~vy~~~~~plv~~~l~G~n~~i~ayGqtgSGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~l 93 (583)
..|.||+||+++++|++||+.+++|+|+++++|||+||||||||||||||||+|..... .....+|||||++++|
T Consensus 50 ~~f~FD~Vf~~~~~Q~~vy~~~~~plv~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~~-----~~~~~~Giipr~~~~l 124 (344)
T 4a14_A 50 RHFGFHVVLAEDAGQEAVYQACVQPLLEAFFEGFNATVFAYGQTGSGKTYTMGEASVAS-----LLEDEQGIVPRAMAEA 124 (344)
T ss_dssp EEEECSEEECTTCCHHHHHHHHTHHHHHHHHTTCCEEEEEESSTTSSHHHHHCC-------------CCCCHHHHHHHHH
T ss_pred ceEEEEEEEecCcchhHHHHHHHHHHHHHHHhhcCeeEEEecccCCCceEeecccchhh-----hhhcccCCchHHHHHH
Confidence 45789999999999999999999999999999999999999999999999999975321 1123469999999999
Q ss_pred HHHHhhccceeEEEEEeehhhchHHhhhhcCCCCccceEEeeeccccccceEEeccceeeecchhHHHHHHHhcchhhhh
Q psy9448 94 FDELRLLGDAEFTVRVSFLEIYNEELIDLLSPTDDITKLRLFEDSARKGSVIIQGLEEKAVHNKDEVYKILEKGSQKRQT 173 (583)
Q Consensus 94 f~~~~~~~~~~~~v~vS~~EIyne~v~DLL~~~~~~~~l~i~~~~~~~~~~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~ 173 (583)
|+.++.....+|.|++||+|||||+|+|||++......+++++++ +++++|.|++++.|.+++|++++|..|.++|++
T Consensus 125 F~~i~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~l~i~e~~--~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~ 202 (344)
T 4a14_A 125 FKLIDENDLLDCLVHVSYLEVYKEEFRDLLEVGTASRDIQLREDE--RGNVVLCGVKEVDVEGLDEVLSLLEMGNAARHT 202 (344)
T ss_dssp HHHHHHCTTSEEEEEEEEEEEETTEEEETTSSCCCGGGCEEEECT--TSCEEEESCCCEECCSHHHHHHHHHHHHHHHHC
T ss_pred HHhcccccceeeEEEEehhhhhHHHHHHHHHhccccccceeeecc--CCCEEEEeeeeccccCHHHHHHHHHhcchhccc
Confidence 999999888899999999999999999999987766789999987 678999999999999999999999999999999
Q ss_pred HHHHhhhcccCceeEEEEEEEeecCCCC-----hhhHhhccCceeeeccCCcccCccchhhhhhhhhcCcchhhhhhhhH
Q psy9448 174 AATLMNAHSSRSHTIFTITIHIKDNSLD-----GEELLRTGKLNLVDLAGSENIGRSGAQDKRAREAGNINQSLLTLGRC 248 (583)
Q Consensus 174 ~~t~~n~~SSRSH~i~~i~i~~~~~~~~-----~~~~~~~s~L~~VDLAGsEr~~~~~~~~~~~~E~~~In~SL~~L~~v 248 (583)
++|.||..|||||+||+|+|++...... .......|+|+|||||||||..++++.+.|++|+.+||+||++|++|
T Consensus 203 ~~T~~N~~SSRSH~If~i~v~~~~~~~~~~~~~~~~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~v 282 (344)
T 4a14_A 203 GATHLNHLSSRSHTVFTVTLEQRGRAPSRLPRPAPGQLLVSKFHFVDLAGSERVLKTGSTGERLKESIQINSSLLALGNV 282 (344)
T ss_dssp ------CCGGGSEEEEEEEEEEEC------------CEEEEEEEEEECCCCCCC--------------CCCSHHHHHHHH
T ss_pred CcchhhhcccccceEEEEEeeeCCCCcccCCCccccceeeeeeeEEecccchhhcccCCchhhhhhheeechhHHhhhhH
Confidence 9999999999999999999987653211 12234568999999999999999999999999999999999999999
Q ss_pred HHHHhhh---CCCCCcchhhHhHHhhhhcCCcceeeEEEEeCccccchhhhhhhhhhhhhhc
Q psy9448 249 ITALVEK---TPHIPYRESKLTRLLQDSLGGRTKTSIIATVSPAQLNMEETLSTLDYAHRAK 307 (583)
Q Consensus 249 i~aL~~~---~~~ipyR~SkLT~lL~d~Lggn~~t~~I~~vsp~~~~~~eTl~TL~fa~r~k 307 (583)
|.+|+++ ..||||||||||+||||+||||++|+||+||||+..+++||++||+||+|||
T Consensus 283 I~aL~~~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~vsP~~~~~~ETl~TL~fA~rAk 344 (344)
T 4a14_A 283 ISALGDPQRRGSHIPYRDSKITRILKDSLGGNAKTVMIACVSPSSSDFDETLNTLNYASRAQ 344 (344)
T ss_dssp HHHHTCTTTTTSCCCGGGCHHHHHTTTSSSTTSEEEEEEEECCBGGGHHHHHHHHHHHHHTC
T ss_pred HHhcCCccccCCCCCcchhhHHHHhHhhcCCCcceEEEEEeCCCccchhHHhhhhhhhhhcC
Confidence 9999864 4699999999999999999999999999999999999999999999999997
No 15
>3nwn_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-78 Score=631.03 Aligned_cols=284 Identities=40% Similarity=0.591 Sum_probs=237.2
Q ss_pred eeeeeehhhcccCCceEEEeehhhhhhHHHHhcccceeEEEeeccCCCceEEeecccCCCCCCCcccCCCCccchhhhhH
Q psy9448 13 MVVSVMFLVCIFYTTIVDVYKYVVNPLIDEVLSGYNCTVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNH 92 (583)
Q Consensus 13 ~~~~~~D~Vf~~~~tq~~vy~~~~~plv~~~l~G~n~~i~ayGqtgSGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~ 92 (583)
...|.||+||+ +++|++||+.+++|+|+++|+|||+||||||||||||||||+|+..+ ...+|||||++++
T Consensus 71 ~~~F~FD~Vf~-~~sQ~~Vy~~~~~plv~~~l~G~N~tifAYGQTGSGKTyTM~G~~~~--------~~~~Giipra~~~ 141 (359)
T 3nwn_A 71 DWSFKLDGVLH-DASQDLVYETVAKDVVSQALDGYNGTIMCYGQTGAGKTYTMMGATEN--------YKHRGILPRALQQ 141 (359)
T ss_dssp EEEEECSEEEE-SCCHHHHHHHHTHHHHHHHHTTCCEEEEEEESTTSSHHHHHTBCSSC--------GGGBCHHHHHHHH
T ss_pred ceEeecCccCC-CCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCCCCCccEEeCCccCC--------ccchhhHHHHHHH
Confidence 35678999997 58999999999999999999999999999999999999999997642 2346999999999
Q ss_pred HHHHHhhccceeEEEEEeehhhchHHhhhhcCCCCc----cceEEeeeccccccceEEeccceeeecchhHHHHHHHhcc
Q psy9448 93 LFDELRLLGDAEFTVRVSFLEIYNEELIDLLSPTDD----ITKLRLFEDSARKGSVIIQGLEEKAVHNKDEVYKILEKGS 168 (583)
Q Consensus 93 lf~~~~~~~~~~~~v~vS~~EIyne~v~DLL~~~~~----~~~l~i~~~~~~~~~~~v~~l~~~~v~s~~e~~~ll~~g~ 168 (583)
||+.+...++..|.|+|||+|||||+|+|||++.+. ...+.+.+++ .+++++|++++.|.+.+|++++|..|.
T Consensus 142 lF~~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~~~~~~~~~~~---~g~~v~~l~~~~v~s~~e~~~ll~~g~ 218 (359)
T 3nwn_A 142 VFRMIEERPTHAITVRVSYLEIYNESLFDLLSTLPYVGPSVTPMTIVENP---QGVFIKGLSVHLTSQEEDAFSLLFEGE 218 (359)
T ss_dssp HHHHHHTCTTSCEEEEEEEEEEETTEEEETTSSSTTSCTTTSCCEEEEET---TEEEEETCCCEECSSHHHHHHHHHHHH
T ss_pred HHHHhhcCCCCcEEEEEEEEEEeccccccccccccccccccccceEEecC---CceEEeccEEEEecCHHHHHHHHHhhh
Confidence 999999988899999999999999999999986432 2356666664 469999999999999999999999999
Q ss_pred hhhhhHHHHhhhcccCceeEEEEEEEeecCCCChhhHhhccCceeeeccCCcccCccchhhhhhhhhcCcchhhhhhhhH
Q psy9448 169 QKRQTAATLMNAHSSRSHTIFTITIHIKDNSLDGEELLRTGKLNLVDLAGSENIGRSGAQDKRAREAGNINQSLLTLGRC 248 (583)
Q Consensus 169 ~~R~~~~t~~n~~SSRSH~i~~i~i~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~~~~~~~~~~E~~~In~SL~~L~~v 248 (583)
++|.+++|.+|..|||||+||+|+|+...... .......|+|+|||||||||..++++.+.+++|+.+||+||++|++|
T Consensus 219 ~~R~~~~T~~N~~SSRSH~if~i~i~~~~~~~-~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~~Lg~v 297 (359)
T 3nwn_A 219 TNRIIASHTMNKNSSRSHCIFTIYLEAHSRTL-SEEKYITSKINLVDLAGSERLGKSGSEGQVLKEATYINKSLSFLEQA 297 (359)
T ss_dssp HHHHHHHHHHTCCGGGCEEEEEEEEEEC--------CCEEEEEEEEECCCCC----------------CCSTHHHHHHHH
T ss_pred hhcccccccCccccCcceEEEEEEEEeecccc-cCcccccccceeeeccccccccccCCchhHHHhhhhhcccHHHHHHH
Confidence 99999999999999999999999998765432 22334579999999999999999999999999999999999999999
Q ss_pred HHHHhh-hCCCCCcchhhHhHHhhhhcCCcceeeEEEEeCccccchhhhhhhhhhhhhhccC
Q psy9448 249 ITALVE-KTPHIPYRESKLTRLLQDSLGGRTKTSIIATVSPAQLNMEETLSTLDYAHRAKNI 309 (583)
Q Consensus 249 i~aL~~-~~~~ipyR~SkLT~lL~d~Lggn~~t~~I~~vsp~~~~~~eTl~TL~fa~r~k~i 309 (583)
|.||++ +..||||||||||+||||+||||++|+||+||||+..+++||++||+||+|||+|
T Consensus 298 I~aL~~~~~~hVPYRdSkLT~lLqdsLgGnskt~mI~~isP~~~~~~ETlsTL~fA~rak~I 359 (359)
T 3nwn_A 298 IIALGDQKRDHIPFRQCKLTHALKDSLGGNCNMVLVTNIYGEAAQLEETLSSLRFASRMKLV 359 (359)
T ss_dssp HHHHHC-----CCGGGSHHHHHTHHHHSSSSEEEEEEEECCSGGGHHHHHHHHHHHTTGGGC
T ss_pred HHHHHhcCCCcCCcccCHHHHHHHHhcCCCccEEEEEEeCCchhhHHHHHHHHHHHHHHcCC
Confidence 999986 4579999999999999999999999999999999999999999999999999987
No 16
>2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.1e-78 Score=627.41 Aligned_cols=281 Identities=44% Similarity=0.641 Sum_probs=249.1
Q ss_pred eeeeehhhcccCCceEEEeehhhhhhHHHHhcccceeEEEeeccCCCceEEeecccCCCCCCCcccCCCCccchhhhhHH
Q psy9448 14 VVSVMFLVCIFYTTIVDVYKYVVNPLIDEVLSGYNCTVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHL 93 (583)
Q Consensus 14 ~~~~~D~Vf~~~~tq~~vy~~~~~plv~~~l~G~n~~i~ayGqtgSGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~l 93 (583)
..|.||+||+++++|++||+.+ .|+|+++++|||+||||||||||||||||+|++.. +|||||++++|
T Consensus 48 ~~f~FD~Vf~~~~~Q~~Vy~~v-~~lv~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~-----------~Giipr~~~~l 115 (330)
T 2h58_A 48 VSFELDKVFSPQASQQDVFQEV-QALVTSCIDGFNVCIFAYGQTGAGKTYTMEGTAEN-----------PGINQRALQLL 115 (330)
T ss_dssp EEEECSEEECTTCCHHHHHTTT-HHHHHHHHTTCCEEEEEESSTTSSHHHHHTBCSSS-----------BCHHHHHHHHH
T ss_pred eEEecCeEeCCCCCcHhHHHHH-HHHHHHHhCCCEEEEEeECCCCCCCcEEEecCCCC-----------CcHHHHHHHHH
Confidence 4678999999999999999985 89999999999999999999999999999997653 49999999999
Q ss_pred HHHHhhc-cceeEEEEEeehhhchHHhhhhcCCCCccceEEeeeccccccceEEeccceeeecchhHHHHHHHhcchhhh
Q psy9448 94 FDELRLL-GDAEFTVRVSFLEIYNEELIDLLSPTDDITKLRLFEDSARKGSVIIQGLEEKAVHNKDEVYKILEKGSQKRQ 172 (583)
Q Consensus 94 f~~~~~~-~~~~~~v~vS~~EIyne~v~DLL~~~~~~~~l~i~~~~~~~~~~~v~~l~~~~v~s~~e~~~ll~~g~~~R~ 172 (583)
|+.++.. .+..|.|++||+|||||+|+|||++.+. ..+.++..++..++++|+|++++.|.|++|++++|..|.++|+
T Consensus 116 F~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~-~~l~i~~~~~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~ 194 (330)
T 2h58_A 116 FSEVQEKASDWEYTITVSAAEIYNEVLRDLLGKEPQ-EKLEIRLCPDGSGQLYVPGLTEFQVQSVDDINKVFEFGHTNRT 194 (330)
T ss_dssp HHHHHTSCTTEEEEEEEEEEEEETTEEEETTSCSSC-CCCCCEECTTSSCCEECTTCCCEEECSHHHHHHHHHHHHHHTT
T ss_pred HHhhhcccCCceEEEEEEEEEEECCChhhccccccc-ccceEEEeecCCCCEecCCCEEEEeCCHHHHHHHHHHHHhhCC
Confidence 9999864 4678999999999999999999987543 2344444344478999999999999999999999999999999
Q ss_pred hHHHHhhhcccCceeEEEEEEEeecCCCChhhHhhccCceeeeccCCcccCccchhhhhhhhhcCcchhhhhhhhHHHHH
Q psy9448 173 TAATLMNAHSSRSHTIFTITIHIKDNSLDGEELLRTGKLNLVDLAGSENIGRSGAQDKRAREAGNINQSLLTLGRCITAL 252 (583)
Q Consensus 173 ~~~t~~n~~SSRSH~i~~i~i~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~~~~~~~~~~E~~~In~SL~~L~~vi~aL 252 (583)
+++|.||..|||||+||+|+|++..... .....|+|+|||||||||..++++.|.+++|+.+||+||++|++||.+|
T Consensus 195 ~~~T~~N~~SSRSH~if~i~v~~~~~~~---~~~~~skL~lVDLAGSEr~~~t~~~g~r~~E~~~IN~SL~aLg~vI~aL 271 (330)
T 2h58_A 195 TEFTNLNEHSSRSHALLIVTVRGVDCST---GLRTTGKLNLVDLAGSERVGKSGAEGSRLREAQHINKSLSALGDVIAAL 271 (330)
T ss_dssp CTTCCSCSCGGGSEEEEEEEEEEEETTT---TEEEEEEEEEEECCCCCCCC------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCCCcCCccEEEEEEEEEEecCC---CcEEEEEEEEEeCCCCCcccccCCchhhhHHHHHhhHhHHHHHHHHHHH
Confidence 9999999999999999999998765332 2345799999999999999999999999999999999999999999999
Q ss_pred hhhCCCCCcchhhHhHHhhhhcCCcceeeEEEEeCccccchhhhhhhhhhhhhhccCC
Q psy9448 253 VEKTPHIPYRESKLTRLLQDSLGGRTKTSIIATVSPAQLNMEETLSTLDYAHRAKNIT 310 (583)
Q Consensus 253 ~~~~~~ipyR~SkLT~lL~d~Lggn~~t~~I~~vsp~~~~~~eTl~TL~fa~r~k~i~ 310 (583)
++++.||||||||||+||||+||||++|+||+||||+..+++||++||+||+|||+|+
T Consensus 272 ~~~~~hvPyRdSkLT~lL~dsLgGns~t~mI~~isP~~~~~~ETl~TL~fA~rak~i~ 329 (330)
T 2h58_A 272 RSRQGHVPFRNSKLTYLLQDSLSGDSKTLMVVQVSPVEKNTSETLYSLKFAERVRSVE 329 (330)
T ss_dssp HTTCSCCCGGGSHHHHHTHHHHSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHHC---
T ss_pred hcCCCCCcccccHHHHHHHHHhCCCceEEEEEEeCCccccHHHHHHHHHHHHHHhhCc
Confidence 9999999999999999999999999999999999999999999999999999999986
No 17
>2nr8_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural genomics consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens} PDB: 3nwn_A*
Probab=100.00 E-value=6.1e-78 Score=626.97 Aligned_cols=284 Identities=40% Similarity=0.593 Sum_probs=239.0
Q ss_pred eeeeeehhhcccCCceEEEeehhhhhhHHHHhcccceeEEEeeccCCCceEEeecccCCCCCCCcccCCCCccchhhhhH
Q psy9448 13 MVVSVMFLVCIFYTTIVDVYKYVVNPLIDEVLSGYNCTVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNH 92 (583)
Q Consensus 13 ~~~~~~D~Vf~~~~tq~~vy~~~~~plv~~~l~G~n~~i~ayGqtgSGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~ 92 (583)
...|.||+||+ +++|++||+.+++|+|+++++|||+||||||||||||||||+|.... ...+|||||++++
T Consensus 70 ~~~F~fD~Vf~-~~sQ~~Vy~~~~~~lv~~~l~G~N~tIfAYGqTGSGKTyTM~G~~~~--------~~~~Giipra~~~ 140 (358)
T 2nr8_A 70 DWSFKLDGVLH-DASQDLVYETVAKDVVSQALDGYNGTIMCYGQTGAGKTYTMMGATEN--------YKHRGILPRALQQ 140 (358)
T ss_dssp EEEEECSEEEE-SCCHHHHHHHHTHHHHHHHHTTCCEEEEEEESTTSSHHHHHTBCSSC--------GGGBCHHHHHHHH
T ss_pred ceEEECCeecC-CcCHHHHHHHHHHHHHHHHhCCCceEEEEECCCCCCCceEecccccc--------cccCCcHHHHHHH
Confidence 35678999995 89999999999999999999999999999999999999999997642 1246999999999
Q ss_pred HHHHHhhccceeEEEEEeehhhchHHhhhhcCCCC----ccceEEeeeccccccceEEeccceeeecchhHHHHHHHhcc
Q psy9448 93 LFDELRLLGDAEFTVRVSFLEIYNEELIDLLSPTD----DITKLRLFEDSARKGSVIIQGLEEKAVHNKDEVYKILEKGS 168 (583)
Q Consensus 93 lf~~~~~~~~~~~~v~vS~~EIyne~v~DLL~~~~----~~~~l~i~~~~~~~~~~~v~~l~~~~v~s~~e~~~ll~~g~ 168 (583)
||+.++...+..|.|+|||+|||||+|+|||++.+ ...++.+++++ .+++|+|++++.|.+.+|++++|..|.
T Consensus 141 lF~~i~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~~~~l~i~e~~---~g~~v~gl~~~~v~s~~e~~~ll~~g~ 217 (358)
T 2nr8_A 141 VFRMIEERPTHAITVRVSYLEIYNESLFDLLSTLPYVGPSVTPMTIVENP---QGVFIKGLSVHLTSQEEDAFSLLFEGE 217 (358)
T ss_dssp HHHHHHTCTTSCEEEEEEEEEEETTEEEETTSSSTTSCTTTSCCEEEEET---TEEEEETCCCEECSSHHHHHHHHHHHH
T ss_pred HHHHHhhcCCceEEEEEEEEEEeCCeeeECcCCccccCccCCceEEEECC---CceEecCCEEEEcCCHHHHHHHHHHHH
Confidence 99999998888999999999999999999998743 33578888886 469999999999999999999999999
Q ss_pred hhhhhHHHHhhhcccCceeEEEEEEEeecCCCChhhHhhccCceeeeccCCcccCccchhhhhhhhhcCcchhhhhhhhH
Q psy9448 169 QKRQTAATLMNAHSSRSHTIFTITIHIKDNSLDGEELLRTGKLNLVDLAGSENIGRSGAQDKRAREAGNINQSLLTLGRC 248 (583)
Q Consensus 169 ~~R~~~~t~~n~~SSRSH~i~~i~i~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~~~~~~~~~~E~~~In~SL~~L~~v 248 (583)
++|++++|.+|..|||||+||+|+|++...... ......|+|+|||||||||..++++.|.+++|+.+||+||++|++|
T Consensus 218 ~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~-~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~v 296 (358)
T 2nr8_A 218 TNRIIASHTMNKNSSRSHCIFTIYLEAHSRTLS-EEKYITSKINLVDLAGSERLGKSGSEGQVLKEATYINKSLSFLEQA 296 (358)
T ss_dssp HHHHHHHHHHTCCGGGCEEEEEEEEEEC--------CCEEEEEEEEECCCCC----------------CCSTHHHHHHHH
T ss_pred hccccccccCCCCCCcCeEEEEEEEEEEeccCC-CCCEEEEEEEEEECCCCCcccccCCchhhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999987653322 2233579999999999999999999999999999999999999999
Q ss_pred HHHHhhh-CCCCCcchhhHhHHhhhhcCCcceeeEEEEeCccccchhhhhhhhhhhhhhccC
Q psy9448 249 ITALVEK-TPHIPYRESKLTRLLQDSLGGRTKTSIIATVSPAQLNMEETLSTLDYAHRAKNI 309 (583)
Q Consensus 249 i~aL~~~-~~~ipyR~SkLT~lL~d~Lggn~~t~~I~~vsp~~~~~~eTl~TL~fa~r~k~i 309 (583)
|.||+++ ..||||||||||+||||+|||||+|+||+||||+..+++||++||+||+|||+|
T Consensus 297 I~aL~~~~~~hiPyRdSkLT~LLqdsLgGnskt~mIa~isP~~~~~~ETlsTLrfA~Rak~I 358 (358)
T 2nr8_A 297 IIALGDQKRDHIPFRQCKLTHALKDSLGGNCNMVLVTNIYGEAAQLEETLSSLRFASRMKLV 358 (358)
T ss_dssp HHHHHC-----CCGGGSHHHHHTHHHHSSSSEEEEEEEECCSGGGHHHHHHHHHHHTTGGGC
T ss_pred HHHHHhCCCCcCCCccCHHHHHHHHhcCCCCeEEEEEEeCCchhhHHHHHHHHHHHHHhccC
Confidence 9999875 579999999999999999999999999999999999999999999999999986
No 18
>1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A*
Probab=100.00 E-value=4.3e-78 Score=626.91 Aligned_cols=283 Identities=39% Similarity=0.548 Sum_probs=242.6
Q ss_pred eeeeehhhcccCCceEEEeehhhhhhHHHHhcccceeEEEeeccCCCceEEeecccCCCCCCCcccCCCCccchhhhhHH
Q psy9448 14 VVSVMFLVCIFYTTIVDVYKYVVNPLIDEVLSGYNCTVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHL 93 (583)
Q Consensus 14 ~~~~~D~Vf~~~~tq~~vy~~~~~plv~~~l~G~n~~i~ayGqtgSGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~l 93 (583)
..|.||+||+++++|++||+.+ .|+|+++++|||+||||||||||||||||+|+. .|||||++++|
T Consensus 52 ~~f~FD~Vf~~~~~Q~~Vy~~v-~~lv~~~l~G~n~tifAYGqTGSGKTyTM~G~~-------------~Giipr~~~~l 117 (347)
T 1f9v_A 52 HEFKFDKIFDQQDTNVDVFKEV-GQLVQSSLDGYNVCIFAYGQTGSGKTFTMLNPG-------------DGIIPSTISHI 117 (347)
T ss_dssp EEEEESEEECTTCCHHHHHHHH-HHHHGGGGGTCCEEEEEECCTTSSHHHHHHSTT-------------TSHHHHHHHHH
T ss_pred eEEeeCEEECCCCCHHHHHHHH-HHHHHHhcCCceeEEEEECCCCCCCcEeccCCC-------------CCchHHHHHHH
Confidence 4678999999999999999985 799999999999999999999999999999953 39999999999
Q ss_pred HHHHhhc--cceeEEEEEeehhhchHHhhhhcCCCCcc-------ceEEeeeccccccceEEeccceeeecchhHHHHHH
Q psy9448 94 FDELRLL--GDAEFTVRVSFLEIYNEELIDLLSPTDDI-------TKLRLFEDSARKGSVIIQGLEEKAVHNKDEVYKIL 164 (583)
Q Consensus 94 f~~~~~~--~~~~~~v~vS~~EIyne~v~DLL~~~~~~-------~~l~i~~~~~~~~~~~v~~l~~~~v~s~~e~~~ll 164 (583)
|+.++.. .+..|.|+|||+|||||+|+|||++.... .++.+++++. .++++|.|++++.|.+++|++++|
T Consensus 118 F~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~~~~~~~~~i~~~~~-~~~~~v~~l~~~~v~s~~e~~~ll 196 (347)
T 1f9v_A 118 FNWINKLKTKGWDYKVNCEFIEIYNENIVDLLRSDNNNKEDTSIGLKHEIRHDQE-TKTTTITNVTSCKLESEEMVEIIL 196 (347)
T ss_dssp HHHHHHHGGGTCEEEEEEEEEEEETTEEEETTC-------------CCCEEEETT-TTEEEETTCCCEECSSGGGHHHHH
T ss_pred HHHHHhhhhcCCceEEEEEEEEEECCeeeeccCCccccccccccCCceeEEEecC-CCceEecCCEEEEcCCHHHHHHHH
Confidence 9999864 34689999999999999999999876532 2456666543 578999999999999999999999
Q ss_pred HhcchhhhhHHHHhhhcccCceeEEEEEEEeecCCCChhhHhhccCceeeeccCCcccCccchhhhhhhhhcCcchhhhh
Q psy9448 165 EKGSQKRQTAATLMNAHSSRSHTIFTITIHIKDNSLDGEELLRTGKLNLVDLAGSENIGRSGAQDKRAREAGNINQSLLT 244 (583)
Q Consensus 165 ~~g~~~R~~~~t~~n~~SSRSH~i~~i~i~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~~~~~~~~~~E~~~In~SL~~ 244 (583)
..|.++|++++|.||..|||||+||+|+|.+..... .....|+|+|||||||||..++++.|.|++|+.+||+||++
T Consensus 197 ~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~---~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~a 273 (347)
T 1f9v_A 197 KKANKLRSTASTASNEHSSASHSIFIIHLSGSNAKT---GAHSYGTLNLVDLAGSERINVSQVVGDRLRETQNINKSLSC 273 (347)
T ss_dssp HHHC-----------CCGGGSEEEEEEEEEEECC-----CCEEEEEEEEEECCCCCCCCGGGCCHHHHHHHHHHHHHHHH
T ss_pred HHHHhccceeeccCCCCCCCceEEEEEEEEEecCCC---CceeeeEEEEEECCCCccccccccchhhhHHHHHHhHHHHH
Confidence 999999999999999999999999999998765321 22357899999999999999999999999999999999999
Q ss_pred hhhHHHHHhhhC---CCCCcchhhHhHHhhhhcCCcceeeEEEEeCccccchhhhhhhhhhhhhhccCCCchh
Q psy9448 245 LGRCITALVEKT---PHIPYRESKLTRLLQDSLGGRTKTSIIATVSPAQLNMEETLSTLDYAHRAKNITNRPE 314 (583)
Q Consensus 245 L~~vi~aL~~~~---~~ipyR~SkLT~lL~d~Lggn~~t~~I~~vsp~~~~~~eTl~TL~fa~r~k~i~n~~~ 314 (583)
|++||.+|+++. .||||||||||+||||+||||++|+||+||||+..+++||++||+||+|+++|+..|+
T Consensus 274 Lg~vI~aL~~~~~~~~hiPyRdSkLT~lLqdsLgGnskt~mI~~vsP~~~~~~ETl~TLrfA~r~~~i~~~~r 346 (347)
T 1f9v_A 274 LGDVIHALGQPDSTKRHIPFRNSKLTYLLQYSLTGDSKTLMFVNISPSSSHINETLNSLRFASKVNSTRLVSR 346 (347)
T ss_dssp HHHHHHHHTSCC---CCCCGGGSHHHHHHHHHHSTTCEEEEEEEECCSGGGHHHHHHHHHHHHHHCCTTTC--
T ss_pred HHHHHHHHhcccCCCCcCccccCHHHHHHHHHhCCCccEEEEEEeCCccccHHHHHHHHHHHHHHhhhccCCC
Confidence 999999999865 8999999999999999999999999999999999999999999999999999998774
No 19
>3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii}
Probab=100.00 E-value=7.2e-78 Score=626.32 Aligned_cols=282 Identities=36% Similarity=0.522 Sum_probs=234.5
Q ss_pred eeeeehhhcccCCceEEEeehhhhhhHHHHhcccceeEEEeeccCCCceEEeecccCCCCCCCcccCCCCccchhhhhHH
Q psy9448 14 VVSVMFLVCIFYTTIVDVYKYVVNPLIDEVLSGYNCTVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHL 93 (583)
Q Consensus 14 ~~~~~D~Vf~~~~tq~~vy~~~~~plv~~~l~G~n~~i~ayGqtgSGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~l 93 (583)
..|.||+||+++++|++||+.+ .|+|+++++|||+||||||||||||||||+|+. .|||||++++|
T Consensus 53 ~~f~FD~Vf~~~~~Q~~vf~~v-~~lv~~~l~G~n~tifAYGqTGSGKTyTm~g~~-------------~Giipr~~~~l 118 (349)
T 3t0q_A 53 YNFQFDMIFEPSHTNKEIFEEI-RQLVQSSLDGYNVCIFAYGQTGSGKTYTMLNAG-------------DGMIPMTLSHI 118 (349)
T ss_dssp EEEEESEEECTTCCHHHHHHHH-HHHHHGGGTTCEEEEEEECSTTSSHHHHHHSTT-------------TSHHHHHHHHH
T ss_pred eeeecCEEECCCccHHHHHHHH-HHHHHHHHCCcceeEEEeCCCCCCCceEeCCCC-------------CchhhHHHHHH
Confidence 4678999999999999999985 799999999999999999999999999999963 39999999999
Q ss_pred HHHHhhc--cceeEEEEEeehhhchHHhhhhcCCCC---------ccceEEeeeccccccceEEeccceeeecchhHHHH
Q psy9448 94 FDELRLL--GDAEFTVRVSFLEIYNEELIDLLSPTD---------DITKLRLFEDSARKGSVIIQGLEEKAVHNKDEVYK 162 (583)
Q Consensus 94 f~~~~~~--~~~~~~v~vS~~EIyne~v~DLL~~~~---------~~~~l~i~~~~~~~~~~~v~~l~~~~v~s~~e~~~ 162 (583)
|+.++.. .+.+|.|+|||+|||||+|+|||++.. ....+.+++++. .++++|+|++++.|.+++|+++
T Consensus 119 F~~~~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~~~~~~~~~~~i~~~~~-~~g~~v~~l~~~~v~s~~e~~~ 197 (349)
T 3t0q_A 119 FKWTANLKERGWNYEMECEYIEIYNETILDLLRDFKSHDNIDEILDSQKHDIRHDHE-KQGTYITNVTRMKMTSTSQVDT 197 (349)
T ss_dssp HHHHHHHGGGTEEEEEEEEEEEEETTEEEETTC---------------CCCEEEETT-TTEEEETTCCCEECCCHHHHHH
T ss_pred HHHHHHhhhcCceeEEEEEEEEEEcchhhccccccccccccccccccccceeEEecC-CCCEEEeCCEEEEeCCHHHHHH
Confidence 9998864 356899999999999999999998754 234566666653 5689999999999999999999
Q ss_pred HHHhcchhhhhHHHHhhhcccCceeEEEEEEEeecCCCChhhHhhccCceeeeccCCcccCccchhhhhhhhhcCcchhh
Q psy9448 163 ILEKGSQKRQTAATLMNAHSSRSHTIFTITIHIKDNSLDGEELLRTGKLNLVDLAGSENIGRSGAQDKRAREAGNINQSL 242 (583)
Q Consensus 163 ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~i~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~~~~~~~~~~E~~~In~SL 242 (583)
+|..|.++|++++|.||..|||||+||+|+|++...... ....|+|+|||||||||..++++.|.|++|+.+||+||
T Consensus 198 ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~---~~~~~kL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL 274 (349)
T 3t0q_A 198 ILKKASKMRSTAATRSNERSSRSHSVFMVHINGRNLHTG---ETSQGKLNLVDLAGSERINSSAVTGERLRETQNINKSL 274 (349)
T ss_dssp HHHHC------------CTGGGSEEEEEEEEEEEETTTC---CEEEEEEEEEECCCCCCCC----CCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCcccccccccccCCcceEEEEEEEEEecCCC---CeeEEEEEEEeCCCCCccccccCccccchhHHhhhHhH
Confidence 999999999999999999999999999999987754322 23568999999999999999999999999999999999
Q ss_pred hhhhhHHHHHhhhC---CCCCcchhhHhHHhhhhcCCcceeeEEEEeCccccchhhhhhhhhhhhhhccCCCch
Q psy9448 243 LTLGRCITALVEKT---PHIPYRESKLTRLLQDSLGGRTKTSIIATVSPAQLNMEETLSTLDYAHRAKNITNRP 313 (583)
Q Consensus 243 ~~L~~vi~aL~~~~---~~ipyR~SkLT~lL~d~Lggn~~t~~I~~vsp~~~~~~eTl~TL~fa~r~k~i~n~~ 313 (583)
++||+||.||+++. .||||||||||+||||+||||++|+||+||||+..+++||++||+||+|+++|+..+
T Consensus 275 ~aLg~vI~aL~~~~~~~~hiPyRdSkLT~lLqdsLgGnskt~mi~~vsP~~~~~~ETl~TL~fA~rv~~ik~~~ 348 (349)
T 3t0q_A 275 SCLGDVIYALNTPDAGKRYIPFRNSKLTYLLQYSLVGDSKTLMFVNIPPDPNHISETLNSLRFASKVNSTKIAK 348 (349)
T ss_dssp HHHHHHHHHHHSTTGGGSCCCGGGSHHHHHHGGGSSTTCEEEEEEEECCCGGGHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHhcccCCCCcCCCcCCHHHHHHHHhcCCCceEEEEEEeCCchhhHHHHHHHHHHHHHhhhcccCC
Confidence 99999999998754 499999999999999999999999999999999999999999999999999998654
No 20
>2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens}
Probab=100.00 E-value=9.8e-78 Score=628.59 Aligned_cols=285 Identities=37% Similarity=0.518 Sum_probs=230.0
Q ss_pred eeeeehhhcccCCceEEEeehhhhhhHHHHhcccceeEEEeeccCCCceEEeecccCCCCCCCcccCCCCccchhhhhHH
Q psy9448 14 VVSVMFLVCIFYTTIVDVYKYVVNPLIDEVLSGYNCTVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHL 93 (583)
Q Consensus 14 ~~~~~D~Vf~~~~tq~~vy~~~~~plv~~~l~G~n~~i~ayGqtgSGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~l 93 (583)
..|.||+||+++++|++||+.+ .|+|+++|+|||+||||||||||||||||+|.+..+ ...+|||||++++|
T Consensus 83 ~~F~FD~Vf~~~~~Q~~Vy~~v-~~lv~~~l~G~N~tifAYGqTGSGKTyTM~G~~~~~-------~~~~Giipr~~~~l 154 (376)
T 2rep_A 83 HDFSFDRVFPPGSGQDEVFEEI-AMLVQSALDGYPVCIFAYGQTGSGKTFTMEGGPGGD-------PQLEGLIPRALRHL 154 (376)
T ss_dssp CEEECSEEECTTCCHHHHHHHH-HHHHHGGGGTCCEEEEEECSTTSSHHHHHTBCSSCC-------GGGBCHHHHHHHHH
T ss_pred eeeeecEEcCCcccchhhhhhH-HHHHHHhcCCCceEEEEeCCCCCCCceEeecCCCCC-------cccCCcHHHHHHHH
Confidence 4578999999999999999985 699999999999999999999999999999976421 23469999999999
Q ss_pred HHHHhhc--cceeEEEEEeehhhchHHhhhhcCCCC---ccceEEeeeccccccceEEeccceeeecchhHHHHHHHhcc
Q psy9448 94 FDELRLL--GDAEFTVRVSFLEIYNEELIDLLSPTD---DITKLRLFEDSARKGSVIIQGLEEKAVHNKDEVYKILEKGS 168 (583)
Q Consensus 94 f~~~~~~--~~~~~~v~vS~~EIyne~v~DLL~~~~---~~~~l~i~~~~~~~~~~~v~~l~~~~v~s~~e~~~ll~~g~ 168 (583)
|+.++.. .+..|.|++||+|||||+|+|||++.. ....+++++++...++++|.|++++.|.+++|++++|..|.
T Consensus 155 F~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~~~l~ir~~~~~~~~~~v~gl~~~~V~s~~e~~~ll~~g~ 234 (376)
T 2rep_A 155 FSVAQELSGQGWTYSFVASYVEIYNETVRDLLATGTRKGQGGECEIRRAGPGSEELTVTNARYVPVSCEKEVDALLHLAR 234 (376)
T ss_dssp HHHHHHGGGGTEEEEEEEEEEEEETTEEEETTCCC--------CCEEEC---CCCEEETTCCCEEECSHHHHHHHHHHHH
T ss_pred HHHHHHhhcCCeEEEEEEEEEEEECCEeeEccccccccccCCCceEEeccCCCCCEEECCcEEEEeCCHHHHHHHHHHHH
Confidence 9999864 357899999999999999999998753 23467788776557899999999999999999999999999
Q ss_pred hhhhhHHHHhhhcccCceeEEEEEEEeecCCCChhhHhhccCceeeeccCCcccCccchhh----hhhhhhcCcchhhhh
Q psy9448 169 QKRQTAATLMNAHSSRSHTIFTITIHIKDNSLDGEELLRTGKLNLVDLAGSENIGRSGAQD----KRAREAGNINQSLLT 244 (583)
Q Consensus 169 ~~R~~~~t~~n~~SSRSH~i~~i~i~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~~~~~~----~~~~E~~~In~SL~~ 244 (583)
++|++++|.||..|||||+||+|+|+....... ....|+|+|||||||||..++++.| .|++|+.+||+||++
T Consensus 235 ~~R~~~~T~~N~~SSRSH~Ifti~v~~~~~~~~---~~~~skL~lVDLAGSEr~~~t~~~g~~~~~rlkE~~~INkSL~a 311 (376)
T 2rep_A 235 QNRAVARTAQNERSSRSHSVFQLQISGEHSSRG---LQCGAPLSLVDLAGSERLDPGLALGPGERERLRETQAINSSLST 311 (376)
T ss_dssp HHHHHCC-----CGGGSEEEEEEEEEEEESSSC---CEEEEEEEEEECCCCC------------------------CHHH
T ss_pred hhcccccccCCCCCCCceEEEEEEEEEEecCCC---cEEEeEEEEEECCCCcccccccccCccccchhhHHhHhhHHHHH
Confidence 999999999999999999999999987654322 2346899999999999999999999 999999999999999
Q ss_pred hhhHHHHHhhhCCCCCcchhhHhHHhhhhcCCcceeeEEEEeCccccchhhhhhhhhhhhhhccC
Q psy9448 245 LGRCITALVEKTPHIPYRESKLTRLLQDSLGGRTKTSIIATVSPAQLNMEETLSTLDYAHRAKNI 309 (583)
Q Consensus 245 L~~vi~aL~~~~~~ipyR~SkLT~lL~d~Lggn~~t~~I~~vsp~~~~~~eTl~TL~fa~r~k~i 309 (583)
|++||.||++++.||||||||||+||||+||||++|+||+||||+..+++||++||+||+|++++
T Consensus 312 Lg~vI~aL~~~~~hVPYRdSkLT~LLqdsLgGnskT~mIa~isP~~~~~~ETlsTLrfA~Rv~~~ 376 (376)
T 2rep_A 312 LGLVIMALSNKESHVPYRNSKLTYLLQNSLGGSAKMLMFVNISPLEENVSESLNSLRFASKVNQC 376 (376)
T ss_dssp HHHHHHHHHTTCSCCCGGGSHHHHHTGGGTSTTCEEEEEEEECCCGGGHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHhcCCCccCCcCCHHHHHHHHhhCCCCeEEEEEEeCCchhhHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999864
No 21
>3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} SCOP: c.37.1.9
Probab=100.00 E-value=8.8e-78 Score=626.21 Aligned_cols=283 Identities=42% Similarity=0.632 Sum_probs=231.8
Q ss_pred eeeeehhhc--------ccCCceEEEeehhhhhhHHHHhcccceeEEEeeccCCCceEEeecccCCCCCCCcccCCCCcc
Q psy9448 14 VVSVMFLVC--------IFYTTIVDVYKYVVNPLIDEVLSGYNCTVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGI 85 (583)
Q Consensus 14 ~~~~~D~Vf--------~~~~tq~~vy~~~~~plv~~~l~G~n~~i~ayGqtgSGKT~Tm~G~~~~~~~~~~~~~~~~Gi 85 (583)
..|.||+|| ++.++|++||+.+++|+|+++|+|||+||||||||||||||||+|.... +||
T Consensus 51 k~F~FD~vF~~~d~~~~~~~a~Q~~vy~~~~~~lv~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~-----------~Gi 119 (354)
T 3gbj_A 51 KVFAYDHCFWSMDESVKEKYAGQDIVFKCLGENILQNAFDGYNACIFAYGQTGSGKSYTMMGTADQ-----------PGL 119 (354)
T ss_dssp EEEECSEEEECSCTTCTTTBCCHHHHHHHHHHHHHHHHHTTCCEEEEEEECTTSSHHHHHTBCSSS-----------BCH
T ss_pred eEEEeeEEeccCccccccccccHHHHHHHhhHHHHHHHhCCceeEEEeeCCCCCCCceEEecCCCC-----------Cch
Confidence 457899999 4668999999999999999999999999999999999999999997653 499
Q ss_pred chhhhhHHHHHHhhc--cceeEEEEEeehhhchHHhhhhcCCCCccceEEeeeccccccceEEeccceeeecchhHHHHH
Q psy9448 86 VPRAMNHLFDELRLL--GDAEFTVRVSFLEIYNEELIDLLSPTDDITKLRLFEDSARKGSVIIQGLEEKAVHNKDEVYKI 163 (583)
Q Consensus 86 ipr~~~~lf~~~~~~--~~~~~~v~vS~~EIyne~v~DLL~~~~~~~~l~i~~~~~~~~~~~v~~l~~~~v~s~~e~~~l 163 (583)
|||++++||+.+... .+..|.|+|||+|||||+|+|||+|......+++++++ .++++|+|++++.|.+++|++++
T Consensus 120 ipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~l~i~e~~--~~g~~v~gl~~~~v~s~~e~~~l 197 (354)
T 3gbj_A 120 IPRLCSGLFERTQKEENEEQSFKVEVSYMEIYNEKVRDLLDPKGSRQTLKVREHS--VLGPYVDGLSKLAVTSYKDIESL 197 (354)
T ss_dssp HHHHHHHHHHHHHHHCBTTEEEEEEEEEEEEETTEEEETTC------CBCBC--------CCBTTCCCEEECSHHHHHHH
T ss_pred hhHHHHHHHHHHHhhcccccceeeeceeEEEecCeeeEccCCCCCCcceEEEEcC--CCCEEEEeeEEEecCCHHHHHHH
Confidence 999999999998653 45789999999999999999999987666788998887 57899999999999999999999
Q ss_pred HHhcchhhhhHHHHhhhcccCceeEEEEEEEeecCC-CChhhHhhccCceeeeccCCcccCccchhhhhhhhhcCcchhh
Q psy9448 164 LEKGSQKRQTAATLMNAHSSRSHTIFTITIHIKDNS-LDGEELLRTGKLNLVDLAGSENIGRSGAQDKRAREAGNINQSL 242 (583)
Q Consensus 164 l~~g~~~R~~~~t~~n~~SSRSH~i~~i~i~~~~~~-~~~~~~~~~s~L~~VDLAGsEr~~~~~~~~~~~~E~~~In~SL 242 (583)
|..|.++|++++|.||..|||||+||+|+|.+.... ..+......|+|+|||||||||..++++.|.|++|+.+||+||
T Consensus 198 l~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL 277 (354)
T 3gbj_A 198 MSEGNKSRTVAATNMNEESSRSHAVFKITLTHTLYDVKSGTSGEKVGKLSLVDLAGSERATKTGAAGDRLKEGSNINKSL 277 (354)
T ss_dssp HHHHHHCC----------CTTSEEEEEEEEEEEEECTTSCEEEEEEEEEEEEECCCCCCCCCCC------CHHHHHHHHH
T ss_pred HHHHHhcCCeeecCCCCCCCcccEEEEEEEEEEecccCCCCCCeeEEEEEEEECCCCCchhhcCCccccchhHHHhhHHH
Confidence 999999999999999999999999999999865321 1222234578999999999999999999999999999999999
Q ss_pred hhhhhHHHHHhh------hCCCCCcchhhHhHHhhhhcCCcceeeEEEEeCccccchhhhhhhhhhhhhhccC
Q psy9448 243 LTLGRCITALVE------KTPHIPYRESKLTRLLQDSLGGRTKTSIIATVSPAQLNMEETLSTLDYAHRAKNI 309 (583)
Q Consensus 243 ~~L~~vi~aL~~------~~~~ipyR~SkLT~lL~d~Lggn~~t~~I~~vsp~~~~~~eTl~TL~fa~r~k~i 309 (583)
++||+||.+|++ +..||||||||||+||||+||||++|+||+||||+..+++||++||+||.||+.-
T Consensus 278 ~aLg~vI~aL~~~~~~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~vsP~~~~~~ETlsTLr~a~~~~~~ 350 (354)
T 3gbj_A 278 TTLGLVISALADQSAGKNKNKFVPYRDSVLTWLLKDSLGGNSKTAMVATVSPAADNYDETLSTLRYADRAKHH 350 (354)
T ss_dssp HHHHHHHHHHHHC------CCCCCGGGSHHHHHTHHHHSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHhhhcccCCCCcccccccHHHHHHHHHhCCCCeEEEEEEeCCCcchHHHHHHHHHHHHHhhhc
Confidence 999999999986 4579999999999999999999999999999999999999999999999999863
No 22
>1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9
Probab=100.00 E-value=2.3e-77 Score=623.14 Aligned_cols=289 Identities=34% Similarity=0.498 Sum_probs=246.9
Q ss_pred eeeeehhhcccCCceEEEeehhhhhhHHHHhc-ccceeEEEeeccCCCceEEeecccCCCCCCCcccCCCCccchhhhhH
Q psy9448 14 VVSVMFLVCIFYTTIVDVYKYVVNPLIDEVLS-GYNCTVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNH 92 (583)
Q Consensus 14 ~~~~~D~Vf~~~~tq~~vy~~~~~plv~~~l~-G~n~~i~ayGqtgSGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~ 92 (583)
..|.||+||+++++|++||+.+++|+|+++++ |||+||||||||||||||||+|..... ....+|||||++++
T Consensus 50 ~~F~FD~Vf~~~~~Q~~Vy~~~~~plv~~~~~~G~n~tifAYGqTGSGKTyTM~G~~~~~------~~~~~Giipr~~~~ 123 (360)
T 1ry6_A 50 HEFIVDKVFDDTVDNFTVYENTIKPLIIDLYENGCVCSCFAYGQTGSGKTYTMLGSQPYG------QSDTPGIFQYAAGD 123 (360)
T ss_dssp EEEECSEEECTTCCHHHHHHHHTHHHHHHHHHHCCEEEEEEECCTTSSHHHHHHBSSSTT------TSSCBCHHHHHHHH
T ss_pred ceEEeeeEecCCCCHHHHHHHHhhhhhhhhccCCceeEEEeeCCCCCCCCEEEecCCCCC------CccCCCcHHHHHHH
Confidence 45779999999999999999999999999995 999999999999999999999975321 12346999999999
Q ss_pred HHHHHhhc-cceeEEEEEeehhhchHHhhhhcCCCCccceEEeeeccccccceEEeccceeeecchhHHHHHHHhcchhh
Q psy9448 93 LFDELRLL-GDAEFTVRVSFLEIYNEELIDLLSPTDDITKLRLFEDSARKGSVIIQGLEEKAVHNKDEVYKILEKGSQKR 171 (583)
Q Consensus 93 lf~~~~~~-~~~~~~v~vS~~EIyne~v~DLL~~~~~~~~l~i~~~~~~~~~~~v~~l~~~~v~s~~e~~~ll~~g~~~R 171 (583)
||+.++.. .+..|.|++||+|||||+|+|||++.. .+.+++++ +++++|+|++++.|.|++|++++|..|.++|
T Consensus 124 lF~~i~~~~~~~~~~v~vS~~EIYnE~v~DLL~~~~---~~~~~e~~--~~~~~v~gl~~~~V~s~~e~~~~l~~g~~~R 198 (360)
T 1ry6_A 124 IFTFLNIYDKDNTKGIFISFYEIYCGKLYDLLQKRK---MVAALENG--KKEVVVKDLKILRVLTKEELILKMIDGVLLR 198 (360)
T ss_dssp HHHHHHHHCSSSCEEEEEEEEEEETTEEEESCCC----------------CCBCGGGSCCEEECSHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhccCCceEEEEEEEEeeCCeeEEcccCCc---cceeeEcC--CCCEEEcCcEEEEeCCHHHHHHHHHHHhhhh
Confidence 99999864 456899999999999999999998753 35566655 6789999999999999999999999999999
Q ss_pred hhHHHHhhhcccCceeEEEEEEEeecCCCChhhHhhccCceeeeccCCcccCccchhh-hhhhhhcCcchhhhhhhhHHH
Q psy9448 172 QTAATLMNAHSSRSHTIFTITIHIKDNSLDGEELLRTGKLNLVDLAGSENIGRSGAQD-KRAREAGNINQSLLTLGRCIT 250 (583)
Q Consensus 172 ~~~~t~~n~~SSRSH~i~~i~i~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~~~~~~-~~~~E~~~In~SL~~L~~vi~ 250 (583)
++++|.||..|||||+||+|+|..... ....|+|+|||||||||..++++.+ .+++|+.+||+||++|++||.
T Consensus 199 ~~~~T~~N~~SSRSH~if~i~v~~~~~------~~~~skL~lVDLAGSEr~~~t~~~~~~~~~E~~~INkSL~aLg~vI~ 272 (360)
T 1ry6_A 199 KIGVNSQNDESSRSHAILNIDLKDINK------NTSLGKIAFIDLAGSERGADTVSQNKQTQTDGANINRSLLALKECIR 272 (360)
T ss_dssp HHCTTCCTTGGGGSEEEEEEEEEETTT------TEEEEEEEEEECCCTTGGGGGGCSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcccccccCCCccceEEEEEEEEeccC------CcceeEEEEEECCCCccccccccccccchHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999986432 1346899999999999999998876 568899999999999999999
Q ss_pred HHhhhCCCCCcchhhHhHHhhhhcCCcceeeEEEEeCccccchhhhhhhhhhhhhhccCCCchhhhhhh
Q psy9448 251 ALVEKTPHIPYRESKLTRLLQDSLGGRTKTSIIATVSPAQLNMEETLSTLDYAHRAKNITNRPEINQKM 319 (583)
Q Consensus 251 aL~~~~~~ipyR~SkLT~lL~d~Lggn~~t~~I~~vsp~~~~~~eTl~TL~fa~r~k~i~n~~~~n~~~ 319 (583)
+|.++..||||||||||+||||+||||++|+||+||||+..+++||++||+||+|||+|+|.|..|+.+
T Consensus 273 aL~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETlsTLrfA~rak~i~n~~~~~~~~ 341 (360)
T 1ry6_A 273 AMDSDKNHIPFRDSELTKVLRDIFVGKSKSIMIANISPTISCCEQTLNTLRYSSRVKNKGNSKLEGKPI 341 (360)
T ss_dssp HHTTSTTSCCGGGCHHHHHTGGGGSSSCEEEEEEEECCBGGGHHHHHHHHHHHHHHCC-----------
T ss_pred HHhcCCCCCccccCHHHHHHHHHhCCCCeEEEEEEeCCCcccHHHHHHHHHHHHHHhhcccCcccCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999977766543
No 23
>2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D*
Probab=100.00 E-value=6e-77 Score=622.57 Aligned_cols=281 Identities=39% Similarity=0.587 Sum_probs=229.5
Q ss_pred eeeeehhhcccCCceEEEeehhhhhhHHHHhcccceeEEEeeccCCCceEEeecccCCCCCCCcccCCCCccchhhhhHH
Q psy9448 14 VVSVMFLVCIFYTTIVDVYKYVVNPLIDEVLSGYNCTVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHL 93 (583)
Q Consensus 14 ~~~~~D~Vf~~~~tq~~vy~~~~~plv~~~l~G~n~~i~ayGqtgSGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~l 93 (583)
..|.||+||+++++|++||+.+++|+|+++++|||+||||||||||||||||+|+.... .....+||+||++++|
T Consensus 101 ~~F~FD~VF~~~~sQ~~Vy~~~~~plv~~~l~G~N~tifAYGQTGSGKTyTM~G~~~~~-----~~~~~~Giipr~~~~l 175 (387)
T 2heh_A 101 QAFCFDFAFDETASNEVVYRFTARPLVQTIFEGGKATCFAYGQTGSGKTHTMGGDLSGK-----AQNASKGIYAMASRDV 175 (387)
T ss_dssp EEEECSEEECTTCCHHHHHHHTTHHHHHHHHTTCEEEEEEESCTTSSHHHHHC----------------CCHHHHHHHHH
T ss_pred cEEeeeEEEecCCCceeehhhhHHHHHHHHhcCCceEEEEecCCCCCCCeEeccCCCCC-----CcccCCceehhhHHHH
Confidence 46789999999999999999999999999999999999999999999999999964321 1123469999999999
Q ss_pred HHHHhhc--cceeEEEEEeehhhchHHhhhhcCCCCccceEEeeeccccccceEEeccceeeecchhHHHHHHHhcchhh
Q psy9448 94 FDELRLL--GDAEFTVRVSFLEIYNEELIDLLSPTDDITKLRLFEDSARKGSVIIQGLEEKAVHNKDEVYKILEKGSQKR 171 (583)
Q Consensus 94 f~~~~~~--~~~~~~v~vS~~EIyne~v~DLL~~~~~~~~l~i~~~~~~~~~~~v~~l~~~~v~s~~e~~~ll~~g~~~R 171 (583)
|..++.. .+..|.|+|||+|||||+|+|||++. .++++++++ +++++|.||+++.|.|++|++++|..|.++|
T Consensus 176 F~~~~~~~~~~~~~~V~vS~~EIYnE~v~DLL~~~---~~l~i~ed~--~~~v~v~gl~~~~V~s~~e~~~ll~~G~~~R 250 (387)
T 2heh_A 176 FLLKNQPCYRKLGLEVYVTFFEIYNGKLFDLLNKK---AKLRVLEDG--KQQVQVVGLQEHLVNSADDVIKMIDMGSACR 250 (387)
T ss_dssp HHHHTSHHHHTTTCEEEEEEEEEETTEEEETTTTT---EECEEEECT--TCCEEEETCCCEEESSHHHHHHHHHHHHHHC
T ss_pred HHHhhcccccCceEEEEEEEEEecCCeEEECCCCC---ccceEEEcC--CCCEEecCCEEEEeCCHHHHHHHHHHHHhhC
Confidence 9998754 35689999999999999999999864 468888887 6789999999999999999999999999999
Q ss_pred hhHHHHhhhcccCceeEEEEEEEeecCCCChhhHhhccCceeeeccCCcccCccc-hhhhhhhhhcCcchhhhhhhhHHH
Q psy9448 172 QTAATLMNAHSSRSHTIFTITIHIKDNSLDGEELLRTGKLNLVDLAGSENIGRSG-AQDKRAREAGNINQSLLTLGRCIT 250 (583)
Q Consensus 172 ~~~~t~~n~~SSRSH~i~~i~i~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~~~-~~~~~~~E~~~In~SL~~L~~vi~ 250 (583)
++++|.||..|||||+||+|+|+... ...|+|+|||||||||..+++ +.+.+++|+.+||+||++|++||.
T Consensus 251 ~~~~T~~N~~SSRSH~Ifti~v~~~~--------~~~skL~lVDLAGSER~~~t~~~~~~~~~E~~~INkSL~aLg~vI~ 322 (387)
T 2heh_A 251 TSGQTFANSNSSRSHACFQIILRAKG--------RMHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKSLLALKECIR 322 (387)
T ss_dssp ---------CGGGSEEEEEEEEESSS--------SEEEEEEEEECCCCC---------------CHHHHHHHHHHHHHHH
T ss_pred CcccCcCcCCcccceEEEEEEEEECC--------eeeeEEEEEECCCCccccccccccccchhhHHHHhHHHHHHHHHHH
Confidence 99999999999999999999998642 246899999999999998876 456788899999999999999999
Q ss_pred HHhhhCCCCCcchhhHhHHhhhh-cCCcceeeEEEEeCccccchhhhhhhhhhhhhhccCCCc
Q psy9448 251 ALVEKTPHIPYRESKLTRLLQDS-LGGRTKTSIIATVSPAQLNMEETLSTLDYAHRAKNITNR 312 (583)
Q Consensus 251 aL~~~~~~ipyR~SkLT~lL~d~-Lggn~~t~~I~~vsp~~~~~~eTl~TL~fa~r~k~i~n~ 312 (583)
||+++..||||||||||+||||+ ||||++|+||+||||+..+++||++||+||+|||+|++.
T Consensus 323 aL~~~~~hvPYRdSKLTrlLqdsllGgnskT~mIa~isP~~~~~~ETlsTLrfA~rak~I~~~ 385 (387)
T 2heh_A 323 ALGQNKAHTPFRESKLTQVLRDSFIGENSRTCMIATISPGISSCEYTLNTLRYADRVKELSPH 385 (387)
T ss_dssp HHHTTCSCCCGGGSHHHHHTGGGGSSTTEEEEEEEEECCBGGGHHHHHHHHHHHHHHCC----
T ss_pred HHhcCCCCCCccccHHHHHHhhhccCCCCeEEEEEEeCCccchHHHHHHHHHHHHHhccCcCC
Confidence 99999999999999999999999 599999999999999999999999999999999999865
No 24
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-76 Score=625.14 Aligned_cols=283 Identities=39% Similarity=0.559 Sum_probs=246.4
Q ss_pred eeeeehhhcccCCceEEEeehhhhhhHHHHhcccceeEEEeeccCCCceEEeecccCCCCCCCcccCCCCccchhhhhHH
Q psy9448 14 VVSVMFLVCIFYTTIVDVYKYVVNPLIDEVLSGYNCTVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHL 93 (583)
Q Consensus 14 ~~~~~D~Vf~~~~tq~~vy~~~~~plv~~~l~G~n~~i~ayGqtgSGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~l 93 (583)
..|.||+||+++++|++||+.+ .|+|+++++|||+||||||||||||||||+|+. .|||||++++|
T Consensus 108 ~~F~FD~VF~~~~~Q~~Vf~~v-~~lv~~~l~G~N~tifAYGqTGSGKTyTM~g~~-------------~Giipr~~~~l 173 (403)
T 4etp_A 108 HEFKFDKIFDQQDTNVDVFKEV-GQLVQSSLDGYNVAIFAYGQTGSGKTFTMLNPG-------------DGIIPSTISHI 173 (403)
T ss_dssp EEEEESEEECTTCCHHHHHHHH-HHHHHHHHTTCCEEEEEESCTTSSHHHHHHCTT-------------TSHHHHHHHHH
T ss_pred eEEEcCEEECCCCchHHHHHHH-HHHHHHHhCCcceEEEEECCCCCCCceEeCCCC-------------CccchhHHHHH
Confidence 5678999999999999999985 699999999999999999999999999999863 39999999999
Q ss_pred HHHHhhc--cceeEEEEEeehhhchHHhhhhcCCCCc-------cceEEeeeccccccceEEeccceeeecchhHHHHHH
Q psy9448 94 FDELRLL--GDAEFTVRVSFLEIYNEELIDLLSPTDD-------ITKLRLFEDSARKGSVIIQGLEEKAVHNKDEVYKIL 164 (583)
Q Consensus 94 f~~~~~~--~~~~~~v~vS~~EIyne~v~DLL~~~~~-------~~~l~i~~~~~~~~~~~v~~l~~~~v~s~~e~~~ll 164 (583)
|+.++.. .++.|.|+|||+|||||+|+|||++... ..++.+++++. .++++|.|++++.|.+++|++.+|
T Consensus 174 F~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~~~~~~~~~i~~~~~-~~~~~v~~l~~~~v~s~~e~~~ll 252 (403)
T 4etp_A 174 FNWINKLKTKGWDYKVNAEFIEIYNENIVDLLRSDNNNKEDTSIGLKHEIRHDQE-TKTTTITNVTSVKLESEEMVEIIL 252 (403)
T ss_dssp HHHHHHHHTTTEEEEEEEEEEEEETTEEEETTCC--------CCSCCCCEEEETT-TTEEEETTCCCEECCCHHHHHHHH
T ss_pred HHHHHhhhccCceEEEEEEEEEEecceeeEccCCccccccccccCcceeeEEeCC-CCCEEecCcEEEEeCCHHHHHHHH
Confidence 9998863 4578999999999999999999987542 23455666653 568999999999999999999999
Q ss_pred HhcchhhhhHHHHhhhcccCceeEEEEEEEeecCCCChhhHhhccCceeeeccCCcccCccchhhhhhhhhcCcchhhhh
Q psy9448 165 EKGSQKRQTAATLMNAHSSRSHTIFTITIHIKDNSLDGEELLRTGKLNLVDLAGSENIGRSGAQDKRAREAGNINQSLLT 244 (583)
Q Consensus 165 ~~g~~~R~~~~t~~n~~SSRSH~i~~i~i~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~~~~~~~~~~E~~~In~SL~~ 244 (583)
..|.++|++++|.||..|||||+||+|+|........ ....|+|+|||||||||..++++.|.|++|+.+||+||++
T Consensus 253 ~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~---~~~~~kL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~a 329 (403)
T 4etp_A 253 KKANKLRSTASTASNEHSSRSHSIFIIHLSGSNAKTG---AHSYGTLNLVDLAGSERINVSQVVGDRLRETQNINKSLSA 329 (403)
T ss_dssp HHHC--C----CHHHHHHHTSEEEEEEEEEEEETTTC---CEEEEEEEEEECCCCCCCCCSSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcccccccCCcccCCcccEEEEEEEEeecCCC---CeeEEEEEEEECCCCccccccCChhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999987654322 2346899999999999999999999999999999999999
Q ss_pred hhhHHHHHhhhCC---CCCcchhhHhHHhhhhcCCcceeeEEEEeCccccchhhhhhhhhhhhhhccCCCchh
Q psy9448 245 LGRCITALVEKTP---HIPYRESKLTRLLQDSLGGRTKTSIIATVSPAQLNMEETLSTLDYAHRAKNITNRPE 314 (583)
Q Consensus 245 L~~vi~aL~~~~~---~ipyR~SkLT~lL~d~Lggn~~t~~I~~vsp~~~~~~eTl~TL~fa~r~k~i~n~~~ 314 (583)
||+||.||+++.. ||||||||||+||||+||||++|+||+||||+..+++||++||+||+|+++|+..|+
T Consensus 330 Lg~vI~aL~~~~~~~~hiPyRdSkLT~LLqdsLgGnskt~mi~~vsP~~~~~~ETl~TL~fA~rv~~~~~~~r 402 (403)
T 4etp_A 330 LGDVIHALGQPDSTKRHIPFRNSKLTYLLQYSLTGDSKTLMFVNISPSSSHINETLNSLRFASKVNSTRLVSR 402 (403)
T ss_dssp HHHHHHHHTSSCTTTSCCCGGGSHHHHHTGGGTSTTCEEEEEEEECCSGGGHHHHHHHHHHHHHHCCC-----
T ss_pred HHHHHHHHhcccCCCCcCCcccchHHHHHHHhcCCCceEEEEEEeCCchhhHHHHHHHHHHHHHHhhcccCCC
Confidence 9999999987654 999999999999999999999999999999999999999999999999999998774
No 25
>1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A*
Probab=100.00 E-value=1.4e-76 Score=623.38 Aligned_cols=283 Identities=38% Similarity=0.572 Sum_probs=233.0
Q ss_pred eeeeehhhcccCCceEEEeehhhhhhHHHHhcccceeEEEeeccCCCceEEeecccCCCCCCCcccCCCCccchhhhhHH
Q psy9448 14 VVSVMFLVCIFYTTIVDVYKYVVNPLIDEVLSGYNCTVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHL 93 (583)
Q Consensus 14 ~~~~~D~Vf~~~~tq~~vy~~~~~plv~~~l~G~n~~i~ayGqtgSGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~l 93 (583)
..|.||+||+++++|++||+.+++|+|+++|+|||+||||||||||||||||+|+.... ......|||||++++|
T Consensus 121 ~~F~FD~VF~~~~tQ~~Vy~~~~~plV~~~l~G~N~tifAYGQTGSGKTyTM~G~~~~~-----~~~~~~Giipra~~~l 195 (410)
T 1v8k_A 121 QAFCFDFAFDETASNEVVYRFTARPLVQTIFEGGKATCFAYGQTGSGKTHTMGGDLSGK-----SQNASKGIYAMASRDV 195 (410)
T ss_dssp EEEECSEEECTTCCHHHHHHHTTHHHHHHHHTTCEEEEEEEESTTSSHHHHHHCBC---------CBGGGSHHHHHHHHH
T ss_pred eEEeeeEEEecCCChhhhhHHHHHHHHHHHhcCCceeEEeecCCCCCCCeEeecCCCCC-----CccccCcchhhhHHHH
Confidence 45779999999999999999999999999999999999999999999999999964321 1223569999999999
Q ss_pred HHHHhhc--cceeEEEEEeehhhchHHhhhhcCCCCccceEEeeeccccccceEEeccceeeecchhHHHHHHHhcchhh
Q psy9448 94 FDELRLL--GDAEFTVRVSFLEIYNEELIDLLSPTDDITKLRLFEDSARKGSVIIQGLEEKAVHNKDEVYKILEKGSQKR 171 (583)
Q Consensus 94 f~~~~~~--~~~~~~v~vS~~EIyne~v~DLL~~~~~~~~l~i~~~~~~~~~~~v~~l~~~~v~s~~e~~~ll~~g~~~R 171 (583)
|..+... .+..|.|+|||+|||||+|+|||++. ..+++++++ .++++|.||+++.|.|++|++++|..|.++|
T Consensus 196 F~~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~---~~l~i~ed~--~~~v~V~gl~e~~V~s~~e~~~ll~~G~~~R 270 (410)
T 1v8k_A 196 FLLKNQPRYRNLNLEVYVTFFEIYNGKVFDLLNKK---AKLRVLEDS--RQQVQVVGLQEYLVTCADDVIKMINMGSACR 270 (410)
T ss_dssp HHHHTSHHHHTTCCEEEEEEEEEETTEEEETTTTT---EEEEEEECS--SCCEEEETCCCEEESSHHHHHHHHHHHHHTC
T ss_pred HHHHhhhcccCccEEEEEEEEEeeCCEEEECCCCC---CCceEEECC--CCCeEecCCEEEEeCCHHHHHHHHHHHHhhC
Confidence 9998754 35689999999999999999999864 468899887 6789999999999999999999999999999
Q ss_pred hhHHHHhhhcccCceeEEEEEEEeecCCCChhhHhhccCceeeeccCCcccCccc-hhhhhhhhhcCcchhhhhhhhHHH
Q psy9448 172 QTAATLMNAHSSRSHTIFTITIHIKDNSLDGEELLRTGKLNLVDLAGSENIGRSG-AQDKRAREAGNINQSLLTLGRCIT 250 (583)
Q Consensus 172 ~~~~t~~n~~SSRSH~i~~i~i~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~~~-~~~~~~~E~~~In~SL~~L~~vi~ 250 (583)
++++|.||..|||||+||+|+|+... ...|+|+|||||||||..+++ +.+.+++|+.+||+||++||+||.
T Consensus 271 ~~~~T~~N~~SSRSH~Ifti~v~~~~--------~~~skL~lVDLAGSER~~~t~~~~~~~~~E~~~INkSL~aLg~vI~ 342 (410)
T 1v8k_A 271 TSGQTFANSNSSRSHACFQILLRTKG--------RLHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKSLLALKECIR 342 (410)
T ss_dssp C--------CCCSSEEEEEEEEESSS--------SEEEEEEEEECCCCCC------------TTHHHHHHHHHHHHHHHH
T ss_pred CcccccCCCCCCCceEEEEEEEEeCC--------cceeEEEEEECCCccccccccccccchhHHHHHHhHHHHHHHHHHH
Confidence 99999999999999999999998642 246899999999999998876 456788899999999999999999
Q ss_pred HHhhhCCCCCcchhhHhHHhhhh-cCCcceeeEEEEeCccccchhhhhhhhhhhhhhccCCCchh
Q psy9448 251 ALVEKTPHIPYRESKLTRLLQDS-LGGRTKTSIIATVSPAQLNMEETLSTLDYAHRAKNITNRPE 314 (583)
Q Consensus 251 aL~~~~~~ipyR~SkLT~lL~d~-Lggn~~t~~I~~vsp~~~~~~eTl~TL~fa~r~k~i~n~~~ 314 (583)
||+++..||||||||||+||||+ ||||++|+||+||||+..+++||++||+||+|||+|..+|.
T Consensus 343 aL~~~~~hIPYRdSKLTrLLqdsllGgnskT~mIa~iSP~~~~~~ETlsTLrfA~rak~i~~~~~ 407 (410)
T 1v8k_A 343 ALGQNKAHTPFRESKLTQVLRDSFIGENSRTCMIAMISPGISSCEYTLNTLRYADRVKELSHHHH 407 (410)
T ss_dssp HHTC------CCCCHHHHHTTHHHHSSSEEEEEEEEECCBGGGHHHHHHHHHHHHHHHTTC----
T ss_pred HHhcCCCCCCcccchhHHHHhhcccCCCceEEEEEEeCCccccHHHHHHHHHHHHHhccCCCCCC
Confidence 99999999999999999999999 69999999999999999999999999999999999988775
No 26
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=100.00 E-value=1.2e-75 Score=619.80 Aligned_cols=279 Identities=37% Similarity=0.580 Sum_probs=239.6
Q ss_pred eeeeehhhcccCCceEEEeehhhhhhHHHHhcccceeEEEeeccCCCceEEeecccCCCCCCCcccCCCCccchhhhhHH
Q psy9448 14 VVSVMFLVCIFYTTIVDVYKYVVNPLIDEVLSGYNCTVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHL 93 (583)
Q Consensus 14 ~~~~~D~Vf~~~~tq~~vy~~~~~plv~~~l~G~n~~i~ayGqtgSGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~l 93 (583)
..|.||+||+++++|++||+. +.|+|+++++|||+||||||||||||||||+|.+.. .|||||++++|
T Consensus 106 ~~F~FD~VF~~~~~Q~~Vf~~-v~plv~~~l~G~n~tifAYGqTGSGKTyTM~G~~~~-----------~Giipr~~~~l 173 (412)
T 3u06_A 106 QIFSFDQVFHPLSSQSDIFEM-VSPLIQSALDGYNICIFAYGQTGSGKTYTMDGVPES-----------VGVIPRTVDLL 173 (412)
T ss_dssp CEEECSEEECTTCCHHHHHTT-THHHHHHHHTTCCEEEEEESSTTSSHHHHHTEETTE-----------ECHHHHHHHHH
T ss_pred eEEeeCeEcCCCCCHHHHHHH-HHHHHHHHHCCCceEEEEecCCCCCCeeEecCCCCC-----------CccHHHHHHHH
Confidence 457899999999999999986 579999999999999999999999999999997653 49999999999
Q ss_pred HHHHhhc--cceeEEEEEeehhhchHHhhhhcCCCCccceEEeeeccccccceEEeccceeeecchhHHHHHHHhcchhh
Q psy9448 94 FDELRLL--GDAEFTVRVSFLEIYNEELIDLLSPTDDITKLRLFEDSARKGSVIIQGLEEKAVHNKDEVYKILEKGSQKR 171 (583)
Q Consensus 94 f~~~~~~--~~~~~~v~vS~~EIyne~v~DLL~~~~~~~~l~i~~~~~~~~~~~v~~l~~~~v~s~~e~~~ll~~g~~~R 171 (583)
|+.+... .+++|.|+|||+|||||+|+|||++......+++.+++ +++++|.|++++.|.+++|++++|..|.++|
T Consensus 174 F~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~i~~~~~~--~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R 251 (412)
T 3u06_A 174 FDSIRGYRNLGWEYEIKATFLEIYNEVLYDLLSNEQKDMEIRMAKNN--KNDIYVSNITEETVLDPNHLRHLMHTAKMNR 251 (412)
T ss_dssp HHHHHHHGGGTEEEEEEEEEEEEETTEEEETTCCSCCCCCEEECSSC--TTSEEETTCCCEECCSHHHHHHHHHHHHHHC
T ss_pred HHhhhhhcccCceEEEEEEEEEEeCCeeEEcCCCCCCCceeeeeecC--CCCEEEcceEEEEeCCHHHHHHHHHHHHhcc
Confidence 9999864 35789999999999999999999876654455555544 7889999999999999999999999999999
Q ss_pred hhHHHHhhhcccCceeEEEEEEEeecCCCChhhHhhccCceeeeccCCcccCccchhhhhhhhhcCcchhhhhhhhHHHH
Q psy9448 172 QTAATLMNAHSSRSHTIFTITIHIKDNSLDGEELLRTGKLNLVDLAGSENIGRSGAQDKRAREAGNINQSLLTLGRCITA 251 (583)
Q Consensus 172 ~~~~t~~n~~SSRSH~i~~i~i~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~~~~~~~~~~E~~~In~SL~~L~~vi~a 251 (583)
++++|.+|..|||||+||+|+|....... .....|+|+|||||||||.. .+.|++|+.+||+||++||+||.|
T Consensus 252 ~~~~T~~N~~SSRSH~if~i~v~~~~~~~---~~~~~~kL~lVDLAGSEr~~----~~~rl~E~~~INkSL~aLg~vI~a 324 (412)
T 3u06_A 252 ATASTAGNERSSRSHAVTKLELIGRHAEK---QEISVGSINLVDLAGSESPK----TSTRMTETKNINRSLSELTNVILA 324 (412)
T ss_dssp C-----CHHHHTTCEEEEEEEEEEEETTT---TEEEEEEEEEEECCCCCC--------------CTTTHHHHHHHHHHHH
T ss_pred cccccCCCCCCcCceEEEEEEEEEEeCCC---CCEEEEEEEEEECCCCCcCC----ccchhHhHHHHhHHHHHHHHHHHH
Confidence 99999999999999999999998765432 22356899999999999874 357999999999999999999999
Q ss_pred HhhhCCCCCcchhhHhHHhhhhcCCcceeeEEEEeCccccchhhhhhhhhhhhhhccCCCch
Q psy9448 252 LVEKTPHIPYRESKLTRLLQDSLGGRTKTSIIATVSPAQLNMEETLSTLDYAHRAKNITNRP 313 (583)
Q Consensus 252 L~~~~~~ipyR~SkLT~lL~d~Lggn~~t~~I~~vsp~~~~~~eTl~TL~fa~r~k~i~n~~ 313 (583)
|++++.||||||||||+||||+||||++|+||+||||+..+++||++||+||+|+++|+..+
T Consensus 325 L~~~~~hiPyRdSkLT~LLqdsLgGnskt~mI~~vsP~~~~~~ETl~TLrfA~rv~~i~~~~ 386 (412)
T 3u06_A 325 LLQKQDHIPYRNSKLTHLLMPSLGGNSKTLMFINVSPFQDCFQESVKSLRFAASVNSCKMTK 386 (412)
T ss_dssp HHTTCSCCCGGGSHHHHHHGGGTSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHHHHHCC--
T ss_pred HhccCCCCCccccHHHHHHHHhcCCCceEEEEEEeCCChhhHHHHHHHHHHHHHHhhccccc
Confidence 99999999999999999999999999999999999999999999999999999999998543
No 27
>3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A*
Probab=100.00 E-value=5.2e-76 Score=609.33 Aligned_cols=277 Identities=34% Similarity=0.528 Sum_probs=226.7
Q ss_pred eeeeehhhcccCCceEEEeehhhhhhHHHHhcccceeEEEeeccCCCceEEeecccCCCCCCCcccCCCCccchhhhhHH
Q psy9448 14 VVSVMFLVCIFYTTIVDVYKYVVNPLIDEVLSGYNCTVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHL 93 (583)
Q Consensus 14 ~~~~~D~Vf~~~~tq~~vy~~~~~plv~~~l~G~n~~i~ayGqtgSGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~l 93 (583)
..|.||+||+++++|++||+.+++|+|+++++|||+||||||||||||||||+|..... ......|||||++++|
T Consensus 61 ~~F~FD~Vf~~~~sQ~~Vy~~~~~plv~~~l~G~N~tifAYGQTGSGKTyTM~g~~~~~-----~~~~~~GIipra~~~L 135 (344)
T 3dc4_A 61 NEFHFDHAFPATISQDEMYQALILPLVDKLLEGFQCTALAYGQTGTGKSYSMGMTPPGE-----ILPEHLGILPRALGDI 135 (344)
T ss_dssp EEEECSEEECTTCCHHHHHHHHTHHHHHHHHHTCCEEEEEESSTTSSHHHHHTCSCGGG-----SCGGGCCHHHHHHHHH
T ss_pred cEEEcceEECCCCCHHHHHHhhccchhhHhhCCCceEEEEecCCCCCCCeEEcCCCCCC-----CCcccCCcHHHHHHHH
Confidence 45789999999999999999999999999999999999999999999999999875321 1133569999999999
Q ss_pred HHHHhhcc---ceeEEEEEeehhhchHHhhhhcCCCCccceEEeeeccccccceEEeccceeeecchhHHHHHHHhcchh
Q psy9448 94 FDELRLLG---DAEFTVRVSFLEIYNEELIDLLSPTDDITKLRLFEDSARKGSVIIQGLEEKAVHNKDEVYKILEKGSQK 170 (583)
Q Consensus 94 f~~~~~~~---~~~~~v~vS~~EIyne~v~DLL~~~~~~~~l~i~~~~~~~~~~~v~~l~~~~v~s~~e~~~ll~~g~~~ 170 (583)
|+.+.... ...|.|++||+|||||+|+|||++......+ ...+.+++++.|.+.+|++++|..|.++
T Consensus 136 F~~i~~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~----------~~~~~~~~~~~v~s~~e~~~ll~~g~~~ 205 (344)
T 3dc4_A 136 FERVTARQENNKDAIQVYASFIEIYNEKPFDLLGSTPHMPMV----------AARCQRCTCLPLHSQADLHHILELGTRN 205 (344)
T ss_dssp HHHHHHSSSSCSSCCEEEEEEEEEESSCEEETTSSCTTSBCC----------SSTTTCSCCEECSSHHHHHHHHHHHHHT
T ss_pred HHHHHhhhhccccceEEEEEEEEEeCCeeEEccCCCCCCccc----------cccccCceecccCCHHHHHHHHHHHHhh
Confidence 99997653 3469999999999999999999876532211 1224589999999999999999999999
Q ss_pred hhhHHHHhhhcccCceeEEEEEEEeecCCCChhhHhhccCceeeeccCCcccCccchhhhhhhhhcCcchhhhhhhhHHH
Q psy9448 171 RQTAATLMNAHSSRSHTIFTITIHIKDNSLDGEELLRTGKLNLVDLAGSENIGRSGAQDKRAREAGNINQSLLTLGRCIT 250 (583)
Q Consensus 171 R~~~~t~~n~~SSRSH~i~~i~i~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~~~~~~~~~~E~~~In~SL~~L~~vi~ 250 (583)
|++++|.||..|||||+||+|+|+... ..|+|+|||||||||..++++.|.+++|+.+||+||++|++||.
T Consensus 206 R~~~~T~~N~~SSRSH~Ifti~v~~~~---------~~skl~lVDLAGSEr~~~t~~~g~r~~E~~~INkSL~aLg~vI~ 276 (344)
T 3dc4_A 206 RRVRPTNMNSNSSRSHAIVTIHVKSKT---------HHSRMNIVDLAGSEGVRRTGHEGVARQEGVNINLGLLSINKVVM 276 (344)
T ss_dssp CC----------CCEEEEEEEEEECSS---------CEEEEEEEECCCCCCC-------------CCSCCHHHHHHHHHH
T ss_pred cccccccCCCCCCCceEEEEEEEEecC---------cEEEEEEEECCCCccccccccccchhHHHHHHhHhHHHHHHHHH
Confidence 999999999999999999999997532 36899999999999999999999999999999999999999999
Q ss_pred HHhhhCCCCCcchhhHhHHhhhhcCCcceeeEEEEeCccccchhhhhhhhhhhhhhccCCCchh
Q psy9448 251 ALVEKTPHIPYRESKLTRLLQDSLGGRTKTSIIATVSPAQLNMEETLSTLDYAHRAKNITNRPE 314 (583)
Q Consensus 251 aL~~~~~~ipyR~SkLT~lL~d~Lggn~~t~~I~~vsp~~~~~~eTl~TL~fa~r~k~i~n~~~ 314 (583)
+|++++.||||||||||+||||+||||++|+||+||||+..+++||++||+||+||+.....|.
T Consensus 277 aL~~~~~hiPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETlsTL~fA~ra~~~~~~~~ 340 (344)
T 3dc4_A 277 SMAAGHTVIPYRDSVLTTVLQASLTAQSYLTFLACISPHQCDLSETLSTLRFGTSAKAAALEHH 340 (344)
T ss_dssp HHHTTCSSCCGGGSHHHHHTTTTSSTTCEEEEEEEECCCGGGHHHHHHHHHHHHHHHHHTTTC-
T ss_pred HHhccCCcCCccccHHHHHHHHHhCCCCEEEEEEEeCCchhhHHHHHHHHHHHHHHhhcCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999876664
No 28
>4h1g_A Maltose binding protein-cakar3 motor domain fusio; kinesin motor domain, motor protein, chimera; HET: MTT ADP EDO; 2.15A {Escherichia coli}
Probab=100.00 E-value=2.5e-71 Score=632.97 Aligned_cols=284 Identities=38% Similarity=0.564 Sum_probs=236.4
Q ss_pred CcceeeeeeehhhcccCCceEEEeehhhhhhHHHHhcccceeEEEeeccCCCceEEeecccCCCCCCCcccCCCCccchh
Q psy9448 9 LNTMMVVSVMFLVCIFYTTIVDVYKYVVNPLIDEVLSGYNCTVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPR 88 (583)
Q Consensus 9 ~~~~~~~~~~D~Vf~~~~tq~~vy~~~~~plv~~~l~G~n~~i~ayGqtgSGKT~Tm~G~~~~~~~~~~~~~~~~Giipr 88 (583)
.+.-...|.||+||+++++|++||+.+ .|+|+++++|||+||||||||||||||||+|.. +|||||
T Consensus 425 ~~~~~~~f~fd~vf~~~~~q~~v~~~~-~~~v~~~~~G~n~~i~ayGqtgsGKT~Tm~g~~-------------~Giipr 490 (715)
T 4h1g_A 425 NNFSNLRFLFDKIFEREQSNDLVFEEL-SQLIQCSLDGTNVCVFAYGQTGSGKTFTMSHPT-------------NGMIPL 490 (715)
T ss_dssp TEEEEEEEECSEEECSSCCHHHHGGGT-HHHHHHHHTTCCEEEEEESSTTSSHHHHHHCTT-------------TSHHHH
T ss_pred CCCCCeEEEeceEeCCCCCHHHHHHHH-HHHHHHHhCCceEEEEccCCCCCchhhccCCCC-------------CCcHHH
Confidence 344556677999999999999999875 699999999999999999999999999999853 399999
Q ss_pred hhhHHHHHHhhc--cceeEEEEEeehhhchHHhhhhcCCCCc-cceEEeeeccccccceEEeccceeeecchhHHHHHHH
Q psy9448 89 AMNHLFDELRLL--GDAEFTVRVSFLEIYNEELIDLLSPTDD-ITKLRLFEDSARKGSVIIQGLEEKAVHNKDEVYKILE 165 (583)
Q Consensus 89 ~~~~lf~~~~~~--~~~~~~v~vS~~EIyne~v~DLL~~~~~-~~~l~i~~~~~~~~~~~v~~l~~~~v~s~~e~~~ll~ 165 (583)
++++||+.++.. .+..|.|+|||+|||||+|+|||+|... ...+.+++++. .++++|+||+++.|.|.+|++++|.
T Consensus 491 ~~~~lf~~~~~~~~~~~~~~v~~s~~Eiyne~i~DLl~~~~~~~~~~~~~~~~~-~g~~~v~~l~~~~v~~~~~~~~~~~ 569 (715)
T 4h1g_A 491 SLKKIFNDIEELKEKGWSYTVRGKFIEIYNEAIVDLLNPKIDPNTKYEIKHDDI-AGKTTVTNVSTIDIKSPEQAITILN 569 (715)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEEEEEEETTEEEESSSCCCCTTCCCCEEEETT-TTEEEETTCCCEECSCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCceEEEEEEEEEEECCEEEECCCCCCCCCCcceeEEecC-CCCEEEeCCEEEEcCCHHHHHHHHH
Confidence 999999999864 3568999999999999999999987543 34566665543 6789999999999999999999999
Q ss_pred hcchhhhhHHHHhhhcccCceeEEEEEEEeecCCCChhhHhhccCceeeeccCCcccCccchhhhhhhhhcCcchhhhhh
Q psy9448 166 KGSQKRQTAATLMNAHSSRSHTIFTITIHIKDNSLDGEELLRTGKLNLVDLAGSENIGRSGAQDKRAREAGNINQSLLTL 245 (583)
Q Consensus 166 ~g~~~R~~~~t~~n~~SSRSH~i~~i~i~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~~~~~~~~~~E~~~In~SL~~L 245 (583)
.|.++|++++|.+|..|||||+||+|+|++...... ....|+|+|||||||||..++++.|.|++|+.+||+||++|
T Consensus 570 ~g~~~r~~~~t~~n~~ssRSH~i~~i~~~~~~~~~~---~~~~~~l~lvDLAGsEr~~~~~~~g~~~~E~~~IN~sL~~L 646 (715)
T 4h1g_A 570 QANKKRSTAATKSNDHSSRSHSIFIIDLQGYNSLTK---ESSYGTLNLIDLAGSERLNNSRAEGDRLKETQAINKSLSCL 646 (715)
T ss_dssp HHHCC----------CGGGSEEEEEEEEEEEETTTC---CEEEEEEEEEECCCCCC---------CHHHHHHHHHHHHHH
T ss_pred HHHhccCcccccccCccccccEEEEEEEEEEecCCC---CEeEEEEEEEeCCCcccccccCChhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999987654322 23579999999999999999999999999999999999999
Q ss_pred hhHHHHHhhh-CCCCCcchhhHhHHhhhhcCCcceeeEEEEeCccccchhhhhhhhhhhhhhccCC
Q psy9448 246 GRCITALVEK-TPHIPYRESKLTRLLQDSLGGRTKTSIIATVSPAQLNMEETLSTLDYAHRAKNIT 310 (583)
Q Consensus 246 ~~vi~aL~~~-~~~ipyR~SkLT~lL~d~Lggn~~t~~I~~vsp~~~~~~eTl~TL~fa~r~k~i~ 310 (583)
++||.+|+.+ ..|||||||||||||||+|||||+|+||+||||+..+++||++||+||+|||+|+
T Consensus 647 ~~vi~al~~~~~~~vpyR~SkLT~lL~~slggn~~t~~i~~isp~~~~~~et~~tL~fa~r~~~i~ 712 (715)
T 4h1g_A 647 GDVIHSLNLKDGSHVPYRNSKLTYLLKHSLGGNSKTLMFVNISPLTKDLNETINSLRFATKVNNTR 712 (715)
T ss_dssp HHHHHHHHHCSCCCCCGGGCHHHHHTGGGTSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHHCC--
T ss_pred HHHHHHHhhcCCCcCCCccCHHHHHHHhhcCCCceEEEEEEECCChhhHHHHHHHHHHHHHhccce
Confidence 9999999864 5899999999999999999999999999999999999999999999999999996
No 29
>2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster}
Probab=100.00 E-value=1e-43 Score=371.94 Aligned_cols=213 Identities=44% Similarity=0.702 Sum_probs=181.2
Q ss_pred cccccCCCchHHhhccceeeeecCCCceeEEeeecccccccccccccccccccccceeehhhhhhhHHHHhcccceeEEE
Q psy9448 353 EINQKMPLNSVERAAKSCSIVDCSSSREITIKERVNDKISKTFGFDRVFSQESKQVDVYKYVVNPLIDEVLSGYNCTVFA 432 (583)
Q Consensus 353 ~~~qk~P~~~~E~a~~~~~iV~~~~~~~~~~~~~~~~~~~k~f~fD~vf~~~~~q~~vy~~~~~~~v~~~l~G~n~~i~a 432 (583)
-.-+.||++..|...+...+|++.+.+++.+.++......+.|+||+||+++++|++||+.++.|+|+.+|+|||+||||
T Consensus 27 V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~F~FD~vf~~~~~Q~~Vy~~~~~plv~~~l~G~n~tifA 106 (373)
T 2wbe_C 27 VYVRVRPLNSRERCIRSAEVVDVVGPREVVTRHTLDSKLTKKFTFDRSFGPESKQCDVYSVVVSPLIEEVLNGYNCTVFA 106 (373)
T ss_dssp EEEEECCCCHHHHHHTCCBCEEEETTTEEEESSSSSSTTCEEEECSEEECTTCCHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred EEEEcCCCChhhhccCCCceEEEcCCCeEEEecCCCCCCceEEeccEEeccccchhHHHHHHHHHHHHHHhCCceEEEEe
Confidence 34578999999988888888888888888877655555678999999999999999999999999999999999999999
Q ss_pred eeccCCCceEEeeccccCCCCcccccCCCCccchhhhhhhhHHhhccccceeEEEEeeeeechHhhhhccCCCcc-cccc
Q psy9448 433 YGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHLFDELRLLGDAEFTVRVSFLEIYNEELIDLLSPTDD-ITKL 511 (583)
Q Consensus 433 yGqtgsGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~lf~~~~~~~~~~~~v~~S~~eiy~e~i~DLL~~~~~-~~~~ 511 (583)
||||||||||||+|....+....+.++...|||||++++||+.++.. +.+|.|++||+|||||+|+|||++... .+.+
T Consensus 107 YGqTGSGKTyTm~G~~~~~~~~~~~~~~~~Giipr~~~~lF~~i~~~-~~~~~v~vS~~EIYnE~i~DLL~~~~~~~l~i 185 (373)
T 2wbe_C 107 YGQTGTGKTHTMVGNETAELKSSWEDDSDIGIIPRALSHLFDELRMM-EVEYTMRISYLELYNEELCDLLSTDDTTKIRI 185 (373)
T ss_dssp ECSTTSSHHHHHTBSCSCCSSSCSSCTTTBCHHHHHHHHHHHHHHHC-CSCEEEEEEEEEEETTEEEESSCTTSCSCCCE
T ss_pred ecCCCCCcceecccCccccccccccccCCCcChHHHHHHHHHHHHhc-CceEEEEEEEEEEeCCeEEECCCCCCCCCcee
Confidence 99999999999999876544444555667899999999999998764 468999999999999999999987542 2333
Q ss_pred ccchhhHHHHHHHHHHHHHHHhhcceEEeecchHHHHHHHHhhhhceeccCCCCCcccCC----CCccceeeeccC
Q psy9448 512 RHTSEYTEEIEKLRRDLQAAREKNGVFLAAENYDQMVNELYAEVTSVEKKSSSPSAAEDQ----PPTKHLILRARL 583 (583)
Q Consensus 512 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~e~~~~l~~g~~~r~~~~~~----SSRsH~if~~~~ 583 (583)
++++ ++.+.+++.++.+..|.+++|++.+|+.|..+|+++.|. |||||+||+|.+
T Consensus 186 ~~~~-----------------~~~g~v~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v 244 (373)
T 2wbe_C 186 FDDS-----------------TKKGSVIIQGLEEIPVHSKDDVYKLLEKGKERRKTATTLMNAQSSRSHTVFSIVV 244 (373)
T ss_dssp EECS-----------------SSSSCEEETTCCCEEESSHHHHHHHHHHHHHHHTTTCSCHHHHHHHSEEEEEEEE
T ss_pred Eecc-----------------CCCCcEEecCceEEccCCHHHHHHHHHHHhhhhccccccCCCCCCCccEEEEEEE
Confidence 3321 145667889999999999999999999999999999887 999999999864
No 30
>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.3e-43 Score=370.95 Aligned_cols=201 Identities=26% Similarity=0.399 Sum_probs=146.9
Q ss_pred cccccCCCchHHhhccceeeeecCCCceeEEeeecccccccccccccccccccccceeehhhhhhhHHHHhcccceeEEE
Q psy9448 353 EINQKMPLNSVERAAKSCSIVDCSSSREITIKERVNDKISKTFGFDRVFSQESKQVDVYKYVVNPLIDEVLSGYNCTVFA 432 (583)
Q Consensus 353 ~~~qk~P~~~~E~a~~~~~iV~~~~~~~~~~~~~~~~~~~k~f~fD~vf~~~~~q~~vy~~~~~~~v~~~l~G~n~~i~a 432 (583)
-.-+.||+++.|...+...++...++.++.+.++.+....+.|+||+||+++++|++||+.++.|+|+.+|+|||+||||
T Consensus 25 V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~i~~~~~~~~~~~f~FD~Vf~~~~tQ~~Vy~~~~~plv~~~l~G~N~tifA 104 (388)
T 3bfn_A 25 VAVRLRPFVDGTAGASDPPCVRGMDSCSLEIANWRNHQETLKYQFDAFYGERSTQQDIYAGSVQPILRHLLEGQNASVLA 104 (388)
T ss_dssp EEEEECCCC-----------------------------CEEEEECSEEECTTCCHHHHHHHHTGGGHHHHTTTCCEEEEE
T ss_pred EEEECCCCChhhhccCCCceEEecCCCeEEEecCCCCCCeeEEEcceEecCCCCHhHHHHHHHHHHHHHhhcCceeeEee
Confidence 35578999999877655555555556666665554444567899999999999999999999999999999999999999
Q ss_pred eeccCCCceEEeeccccCCCCcccccCCCCccchhhhhhhhHHhhcc----ccceeEEEEeeeeechHhhhhccCCCccc
Q psy9448 433 YGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHLFDELRLL----GDAEFTVRVSFLEIYNEELIDLLSPTDDI 508 (583)
Q Consensus 433 yGqtgsGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~lf~~~~~~----~~~~~~v~~S~~eiy~e~i~DLL~~~~~~ 508 (583)
||||||||||||+|+... +|||||++++||+.++.. ..+.|.|++||+|||||+|+|||+|....
T Consensus 105 YGqTGSGKTyTM~G~~~~-----------~Giipra~~~lF~~i~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~~~~ 173 (388)
T 3bfn_A 105 YGPTGAGKTHTMLGSPEQ-----------PGVIPRALMDLLQLTREEGAEGRPWALSVTMSYLEIYQEKVLDLLDPASGD 173 (388)
T ss_dssp ESCTTSSHHHHHTBCSSS-----------BCHHHHHHHHHHHHHHHHTSTTCSEEEEEEEEEEEEETTEEEESSSCSSCB
T ss_pred ecCCCCCCCeEeecCccc-----------cchhHHHHHHHHHHHHHhhccCCCceEEEEEEEEEEECCeeeehhccCCCC
Confidence 999999999999997543 399999999999998652 35689999999999999999999998776
Q ss_pred cccccchhhHHHHHHHHHHHHHHHhhcceEEeecchHHHHHHHHhhhhceeccCCCCCcccCC----CCccceeeeccC
Q psy9448 509 TKLRHTSEYTEEIEKLRRDLQAAREKNGVFLAAENYDQMVNELYAEVTSVEKKSSSPSAAEDQ----PPTKHLILRARL 583 (583)
Q Consensus 509 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~e~~~~l~~g~~~r~~~~~~----SSRsH~if~~~~ 583 (583)
+.+++ ++.+.+++.++.+..|.++++++.+|..|..+|+++.|. |||||+||+|++
T Consensus 174 l~ire-------------------d~~~~v~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v 233 (388)
T 3bfn_A 174 LVIRE-------------------DCRGNILIPGLSQKPISSFADFERHFLPASRNRTVGATRLNQRSSRSHAVLLVKV 233 (388)
T ss_dssp CCCEE-------------------CTTSCEECTTCCCEECCSHHHHHHHHHHHTC-----------CGGGSEEEEEEEE
T ss_pred ceEEE-------------------cCCCCEEeccceEEEeCCHHHHHHHHHHHhhccccccccCCCCCCCCeEEEEEEE
Confidence 66665 455677889999999999999999999999999988776 999999999864
No 31
>1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A*
Probab=100.00 E-value=2.3e-43 Score=363.14 Aligned_cols=196 Identities=30% Similarity=0.474 Sum_probs=171.1
Q ss_pred ccccCCCchHHhhccceeeeecCCCceeEEeeecccccccccccccccccccccceeehhhhhhhHHHHhcccceeEEEe
Q psy9448 354 INQKMPLNSVERAAKSCSIVDCSSSREITIKERVNDKISKTFGFDRVFSQESKQVDVYKYVVNPLIDEVLSGYNCTVFAY 433 (583)
Q Consensus 354 ~~qk~P~~~~E~a~~~~~iV~~~~~~~~~~~~~~~~~~~k~f~fD~vf~~~~~q~~vy~~~~~~~v~~~l~G~n~~i~ay 433 (583)
.-+.||+++.|...+...++.+.+..++.+. .+.|.||+||+++++|++||+.++.|+|+.+++|||+|||||
T Consensus 12 ~vRvRP~~~~E~~~~~~~~~~~~~~~~~~~~-------~~~f~FD~Vf~~~~sQ~~Vy~~~~~plv~~~l~G~n~tifAY 84 (325)
T 1bg2_A 12 MCRFRPLNESEVNRGDKYIAKFQGEDTVVIA-------SKPYAFDRVFQSSTSQEQVYNDCAKKIVKDVLEGYNGTIFAY 84 (325)
T ss_dssp EEEECCCCHHHHHHTCCBCCEEETTTEEEET-------TEEEECSEEECTTCCHHHHHHHHTHHHHHHHHTTCCEEEEEE
T ss_pred EEEcCCCChhHhccCCeeEEEECCCCeEEEC-------CEEEECCeEeCCCCCHHHHHHHHhhhhHHHHhCCCeEEEEEE
Confidence 4478999999988877777776666666542 478999999999999999999999999999999999999999
Q ss_pred eccCCCceEEeeccccCCCCcccccCCCCccchhhhhhhhHHhhc-cccceeEEEEeeeeechHhhhhccCCCccccccc
Q psy9448 434 GQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHLFDELRL-LGDAEFTVRVSFLEIYNEELIDLLSPTDDITKLR 512 (583)
Q Consensus 434 GqtgsGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~lf~~~~~-~~~~~~~v~~S~~eiy~e~i~DLL~~~~~~~~~~ 512 (583)
|||||||||||+|....+ ...|||||++++||+.+.. ..+..|.|++||+|||||+|+|||++.+..++++
T Consensus 85 GqTGSGKTyTm~G~~~~~--------~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~v~DLL~~~~~~l~i~ 156 (325)
T 1bg2_A 85 GQTSSGKTHTMEGKLHDP--------EGMGIIPRIVQDIFNYIYSMDENLEFHIKVSYFEIYLDKIRDLLDVSKTNLSVH 156 (325)
T ss_dssp CSTTSSHHHHHTBSTTCT--------TTBCHHHHHHHHHHHHHHHHCSSEEEEEEEEEEEEETTEEEESSCTTCCSBCEE
T ss_pred CCCCCCCceEecccCCCc--------ccCccHHHHHHHHHHHHHhccCCceEEEEEEEEEEecCeeeecccCCCCCceEE
Confidence 999999999999975443 2359999999999999965 3567999999999999999999999887766666
Q ss_pred cchhhHHHHHHHHHHHHHHHhhcceEEeecchHHHHHHHHhhhhceeccCCCCCcccCC----CCccceeeeccC
Q psy9448 513 HTSEYTEEIEKLRRDLQAAREKNGVFLAAENYDQMVNELYAEVTSVEKKSSSPSAAEDQ----PPTKHLILRARL 583 (583)
Q Consensus 513 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~e~~~~l~~g~~~r~~~~~~----SSRsH~if~~~~ 583 (583)
+ ++.+.+++.++.+..|.+++|++.+|+.|..+|+++.|. |||||+||+|++
T Consensus 157 e-------------------~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v 212 (325)
T 1bg2_A 157 E-------------------DKNRVPYVKGCTERFVCSPDEVMDTIDEGKSNRHVAVTNMNEHSSRSHSIFLINV 212 (325)
T ss_dssp E-------------------CTTSCEEETTCCCEEECSHHHHHHHHHHHHHHTTTTCSCHHHHHHHSEEEEEEEE
T ss_pred E-------------------CCCCCEEecCceEEeCCCHHHHHHHHHHHHhhCceeecCCCCCCCCCeEEEEEEE
Confidence 5 556677889999999999999999999999999998888 999999999864
No 32
>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A*
Probab=100.00 E-value=3.6e-43 Score=366.46 Aligned_cols=204 Identities=30% Similarity=0.524 Sum_probs=174.4
Q ss_pred cccccCCCchHHhhccceeeeecC-CCceeEEeeecc--cccccccccccccccccccceeehhhhhhhHHHHhccccee
Q psy9448 353 EINQKMPLNSVERAAKSCSIVDCS-SSREITIKERVN--DKISKTFGFDRVFSQESKQVDVYKYVVNPLIDEVLSGYNCT 429 (583)
Q Consensus 353 ~~~qk~P~~~~E~a~~~~~iV~~~-~~~~~~~~~~~~--~~~~k~f~fD~vf~~~~~q~~vy~~~~~~~v~~~l~G~n~~ 429 (583)
-.-+.||++..|...+...++.+. ...++.+.++.. ....+.|+||+||+++++|++||+.++.|+|+.+|+|||+|
T Consensus 25 V~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~v~~~~~~~~~~~~~F~FD~Vf~~~~~Q~~Vy~~~~~plv~~~l~G~n~t 104 (372)
T 3b6u_A 25 VVVRCRPMNGKEKAASYDKVVDVDVKLGQVSVKNPKGTAHEMPKTFTFDAVYDWNAKQFELYDETFRPLVDSVLQGFNGT 104 (372)
T ss_dssp EEEEECCCCHHHHHTTCCBCEEEETTTTEEEECCTTCTTTCCCEEEECSEEECTTCCHHHHHHHTHHHHHHHHHTTCCEE
T ss_pred EEEEcCCCChhhhccCCceEEEEeCCCCEEEEECCCCCCCCCceEEEcCeEeCCcCchHHHHHHHHHHHHHHHhCCCeee
Confidence 455789999999888777777654 345677766543 23467899999999999999999999999999999999999
Q ss_pred EEEeeccCCCceEEeeccccCCCCcccccCCCCccchhhhhhhhHHhhccccceeEEEEeeeeechHhhhhccCCCc-cc
Q psy9448 430 VFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHLFDELRLLGDAEFTVRVSFLEIYNEELIDLLSPTD-DI 508 (583)
Q Consensus 430 i~ayGqtgsGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~lf~~~~~~~~~~~~v~~S~~eiy~e~i~DLL~~~~-~~ 508 (583)
|||||||||||||||+|....+ ...|||||++++||..+....++.|.|++||+|||||+|+|||++.. ..
T Consensus 105 ifAYGqTGSGKTyTM~G~~~~~--------~~~Giipr~~~~lF~~i~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~ 176 (372)
T 3b6u_A 105 IFAYGQTGTGKTYTMEGIRGDP--------EKRGVIPNSFDHIFTHISRSQNQQYLVRASYLEIYQEEIRDLLSKDQTKR 176 (372)
T ss_dssp EEEEESTTSSHHHHHTBCTTSG--------GGBCHHHHHHHHHHHHHHTCSSCEEEEEEEEEEEETTEEEETTSSCTTCC
T ss_pred EEeecCCCCCCCEeEecCCCCc--------ccCCcHHHHHHHHHHHhhhccCCceEEEEEEEEEeCCEEEECCCCCCCCC
Confidence 9999999999999999975432 23599999999999999988888999999999999999999998753 34
Q ss_pred cccccchhhHHHHHHHHHHHHHHHhhcceEEeecchHHHHHHHHhhhhceeccCCCCCcccCC----CCccceeeeccC
Q psy9448 509 TKLRHTSEYTEEIEKLRRDLQAAREKNGVFLAAENYDQMVNELYAEVTSVEKKSSSPSAAEDQ----PPTKHLILRARL 583 (583)
Q Consensus 509 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~e~~~~l~~g~~~r~~~~~~----SSRsH~if~~~~ 583 (583)
+++++ ++.+.+++.++.+..|.+++|++.+|+.|+.+|+++.|. |||||+||+|.|
T Consensus 177 l~i~e-------------------~~~~~v~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v 236 (372)
T 3b6u_A 177 LELKE-------------------RPDTGVYVKDLSSFVTKSVKEIEHVMNVGNQNRSVGATNMNEHSSRSHAIFVITI 236 (372)
T ss_dssp BCEEE-------------------ETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHTTTCSSHHHHHHTSEEEEEEEE
T ss_pred ceEEE-------------------CCCCcEecCCCEEEEecCHHHHHHHHHHHHHhcCcccccCCCCCCcceEEEEEEE
Confidence 45554 556677889999999999999999999999999988887 999999999864
No 33
>3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} SCOP: c.37.1.0
Probab=100.00 E-value=8.3e-43 Score=363.09 Aligned_cols=200 Identities=25% Similarity=0.411 Sum_probs=168.5
Q ss_pred cccccCCCchHHhhccceeeeecCCCceeEEeeecc------------------cccccccccccccccccccceeehhh
Q psy9448 353 EINQKMPLNSVERAAKSCSIVDCSSSREITIKERVN------------------DKISKTFGFDRVFSQESKQVDVYKYV 414 (583)
Q Consensus 353 ~~~qk~P~~~~E~a~~~~~iV~~~~~~~~~~~~~~~------------------~~~~k~f~fD~vf~~~~~q~~vy~~~ 414 (583)
-.-+.||++.+|...+..++|.+.+...+.+.++.. ....+.|.||+||+++++|++||+.+
T Consensus 14 V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~FD~vf~~~~~Q~~Vy~~~ 93 (355)
T 3lre_A 14 VVVRVRPENTKEKAAGFHKVVHVVDKHILVFDPKQEEVSFFHGKKTTNQNVIKKQNKDLKFVFDAVFDETSTQSEVFEHT 93 (355)
T ss_dssp EEEEECCCCHHHHHTTCCBSEEECSSSEEEEC------------------------CCEEEECSEEECTTCCHHHHHHTT
T ss_pred EEEEeCcCChHHHhcCCceEEEecCCceEEecCCCCcceeecccccccccchhccCCCceEEeceEECCCCChHHHHHHH
Confidence 355789999999999999999888777666554321 11245799999999999999999999
Q ss_pred hhhhHHHHhcccceeEEEeeccCCCceEEeeccccCCCCcccccCCCCccchhhhhhhhHHhhcc-ccceeEEEEeeeee
Q psy9448 415 VNPLIDEVLSGYNCTVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHLFDELRLL-GDAEFTVRVSFLEI 493 (583)
Q Consensus 415 ~~~~v~~~l~G~n~~i~ayGqtgsGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~lf~~~~~~-~~~~~~v~~S~~ei 493 (583)
+.|+|+.+|+|||+||||||||||||||||+|+... +|||||++++||+.++.. ....|.|.+||+||
T Consensus 94 ~~plv~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~-----------~Giipr~~~~lf~~i~~~~~~~~~~v~vS~~EI 162 (355)
T 3lre_A 94 TKPILRSFLNGYNCTVLAYGATGAGKTHTMLGSADE-----------PGVMYLTMLHLYKCMDEIKEEKICSTAVSYLEV 162 (355)
T ss_dssp HHHHHHHHTTTCCEEEEEECCTTSSHHHHHTBCSSS-----------BCHHHHHHHHHHHHHHHTTTTEEEEEEEEEEEE
T ss_pred HHHHHHHHhCCCceEEEEeCCCCCCceeeeccCCCC-----------CCeeehhhhHHHHhhhhhccCceEEEEEEEEEE
Confidence 999999999999999999999999999999997644 399999999999999764 34689999999999
Q ss_pred chHhhhhccCCCccccccccchhhHHHHHHHHHHHHHHHhhcceEEeecchHHHHHHHHhhhhceeccCCCCCcccCC--
Q psy9448 494 YNEELIDLLSPTDDITKLRHTSEYTEEIEKLRRDLQAAREKNGVFLAAENYDQMVNELYAEVTSVEKKSSSPSAAEDQ-- 571 (583)
Q Consensus 494 y~e~i~DLL~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~e~~~~l~~g~~~r~~~~~~-- 571 (583)
|||+|+|||.+.. .+++++ ++.+.+++.++.+..|.+++|++.+|..|+.+|+++.|.
T Consensus 163 YnE~i~DLL~~~~-~l~ire-------------------~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N 222 (355)
T 3lre_A 163 YNEQIRDLLVNSG-PLAVRE-------------------DTQKGVVVHGLTLHQPKSSEEILHLLDNGNKNRTQHPTDMN 222 (355)
T ss_dssp ETTEEEESSSCCC-CBEEEE-------------------CTTSCEEEETCCCBCCCSHHHHHHHHHHHHHTSCBC-----
T ss_pred ECCEEEECcCCCC-CceeEE-------------------cCCCCEEeeeeeEEecCCHHHHHHHHHHHHhcCCcccccCc
Confidence 9999999998754 345554 566778899999999999999999999999999988777
Q ss_pred --CCccceeeeccC
Q psy9448 572 --PPTKHLILRARL 583 (583)
Q Consensus 572 --SSRsH~if~~~~ 583 (583)
|||||+||+|.+
T Consensus 223 ~~SSRSH~if~i~v 236 (355)
T 3lre_A 223 ATSSRSHAVFQIYL 236 (355)
T ss_dssp CBCTTCEEEEEEEE
T ss_pred CCCCCCcEEEEEEE
Confidence 999999999864
No 34
>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis}
Probab=100.00 E-value=4.7e-43 Score=363.57 Aligned_cols=199 Identities=32% Similarity=0.524 Sum_probs=161.7
Q ss_pred ccccCCCchHHhhccceeeeecC-CCceeEEeeecc-------cccccccccccccccccccceeehhhhhhhHHHHhcc
Q psy9448 354 INQKMPLNSVERAAKSCSIVDCS-SSREITIKERVN-------DKISKTFGFDRVFSQESKQVDVYKYVVNPLIDEVLSG 425 (583)
Q Consensus 354 ~~qk~P~~~~E~a~~~~~iV~~~-~~~~~~~~~~~~-------~~~~k~f~fD~vf~~~~~q~~vy~~~~~~~v~~~l~G 425 (583)
.-+.||++..|...+...++.+. ...++.+.++.. ....+.|.||+||+++++|++||+.++.|+|+.+++|
T Consensus 9 ~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~v~~~~~~~~~~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv~~~l~G 88 (350)
T 2vvg_A 9 IVRCRPLNARETRENALNIIRMDEASAQVIVDPPEQEKSATQAKKVPRTFTFDAVYDQTSCNYGIFQASFKPLIDAVLEG 88 (350)
T ss_dssp EEEECCCCHHHHHTTCCBCEEEEGGGTEEEECC--------------EEEECSEEECTTCCHHHHHHHTTHHHHHHHHTT
T ss_pred EEEeCCCChhhhccCCceEEEEcCCCCEEEEeeccccccccccCCCceEeeCCEEECCCcchhHHHHHHHHHHHHHHhCC
Confidence 44689999999888777777654 345666666532 2346789999999999999999999999999999999
Q ss_pred cceeEEEeeccCCCceEEeeccccCCCCcccccCCCCccchhhhhhhhHHhhc-cccceeEEEEeeeeechHhhhhccCC
Q psy9448 426 YNCTVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHLFDELRL-LGDAEFTVRVSFLEIYNEELIDLLSP 504 (583)
Q Consensus 426 ~n~~i~ayGqtgsGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~lf~~~~~-~~~~~~~v~~S~~eiy~e~i~DLL~~ 504 (583)
||+||||||||||||||||+|.... +|||||++++||+.++. ..+..|.|.+||+|||||+|+|||++
T Consensus 89 ~n~tifAYGqTGSGKTyTm~G~~~~-----------~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~ 157 (350)
T 2vvg_A 89 FNSTIFAYGQTGAGKTWTMGGNKEE-----------PGAIPNSFKHLFDAINSSSSNQNFLVIGSYLELYNEEIRDLIKN 157 (350)
T ss_dssp CCEEEEEECSTTSSHHHHHTBCSSS-----------BCHHHHHHHHHHHHHHTCCTTEEEEEEEEEEEEETTEEEETTTT
T ss_pred CceeEEeecCCCCCCCEEeecCCcc-----------CchHHHHHHHHHHHHHhhccCCcEEEEEEEEEEeCCEEEEcccC
Confidence 9999999999999999999997643 49999999999999974 45678999999999999999999985
Q ss_pred CccccccccchhhHHHHHHHHHHHHHHHhhcceEEeecchHHHHHHHHhhhhceeccCCCCCcccCC----CCccceeee
Q psy9448 505 TDDITKLRHTSEYTEEIEKLRRDLQAAREKNGVFLAAENYDQMVNELYAEVTSVEKKSSSPSAAEDQ----PPTKHLILR 580 (583)
Q Consensus 505 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~e~~~~l~~g~~~r~~~~~~----SSRsH~if~ 580 (583)
. ..+++++ ++.+.+++.++.+..|.+++|++.+|..|..+|+++.|. |||||+||+
T Consensus 158 ~-~~l~i~e-------------------~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~ 217 (350)
T 2vvg_A 158 N-TKLPLKE-------------------DKTRGIYVDGLSMHRVTTAAELSALMDKGFANRHVAATQMNDTSSRSHSIFM 217 (350)
T ss_dssp E-EEECEEE-------------------ETTTEEEETTCCCEEESSHHHHHHHHHHHHHHC----------CTTCEEEEE
T ss_pred C-cCceeeE-------------------cCCCCEEecCCEEEEcCCHHHHHHHHHHHHhccccccccCCCCCCcceEEEE
Confidence 3 3455554 556678889999999999999999999999988888776 999999999
Q ss_pred ccC
Q psy9448 581 ARL 583 (583)
Q Consensus 581 ~~~ 583 (583)
|++
T Consensus 218 i~v 220 (350)
T 2vvg_A 218 VRI 220 (350)
T ss_dssp EEE
T ss_pred EEE
Confidence 864
No 35
>2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D*
Probab=100.00 E-value=4.5e-43 Score=366.67 Aligned_cols=205 Identities=26% Similarity=0.385 Sum_probs=164.2
Q ss_pred ccccCCCchHHhhccceeeeecCCCceeEEeeeccc------ccccccccccccccccccceeehhhhhhhHHHHhcccc
Q psy9448 354 INQKMPLNSVERAAKSCSIVDCSSSREITIKERVND------KISKTFGFDRVFSQESKQVDVYKYVVNPLIDEVLSGYN 427 (583)
Q Consensus 354 ~~qk~P~~~~E~a~~~~~iV~~~~~~~~~~~~~~~~------~~~k~f~fD~vf~~~~~q~~vy~~~~~~~v~~~l~G~n 427 (583)
.-+.||++..|...+..++|.+.+..++.+.++... ...+.|+||+||+++++|++||+.++.|+|+.+|+|||
T Consensus 56 ~vRvRP~~~~E~~~~~~~~v~~~~~~~~~v~~~~~~~~~~~~~~~~~F~FD~VF~~~~sQ~~Vy~~~~~plv~~~l~G~N 135 (387)
T 2heh_A 56 CVRKRPLNKQELAKKEIDVISIPSKCLLLVHEPKLKVDLTKYLENQAFCFDFAFDETASNEVVYRFTARPLVQTIFEGGK 135 (387)
T ss_dssp EEEECCCCHHHHHTTCCBCEECCBSSEEEEEEEEECTTCCEEEEEEEEECSEEECTTCCHHHHHHHTTHHHHHHHHTTCE
T ss_pred EEECCCCChHHhccCCceEEEECCCCEEEEeCCCccccccccccccEEeeeEEEecCCCceeehhhhHHHHHHHHhcCCc
Confidence 457899999999888888888877777777655322 12468999999999999999999999999999999999
Q ss_pred eeEEEeeccCCCceEEeeccccCCCCcccccCCCCccchhhhhhhhHHhhcc--ccceeEEEEeeeeechHhhhhccCCC
Q psy9448 428 CTVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHLFDELRLL--GDAEFTVRVSFLEIYNEELIDLLSPT 505 (583)
Q Consensus 428 ~~i~ayGqtgsGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~lf~~~~~~--~~~~~~v~~S~~eiy~e~i~DLL~~~ 505 (583)
+||||||||||||||||+|+..... .+...|||||++++||..++.. .+..|.|++||+|||||+|+|||++.
T Consensus 136 ~tifAYGQTGSGKTyTM~G~~~~~~-----~~~~~Giipr~~~~lF~~~~~~~~~~~~~~V~vS~~EIYnE~v~DLL~~~ 210 (387)
T 2heh_A 136 ATCFAYGQTGSGKTHTMGGDLSGKA-----QNASKGIYAMASRDVFLLKNQPCYRKLGLEVYVTFFEIYNGKLFDLLNKK 210 (387)
T ss_dssp EEEEEESCTTSSHHHHHC----------------CCHHHHHHHHHHHHHTSHHHHTTTCEEEEEEEEEETTEEEETTTTT
T ss_pred eEEEEecCCCCCCCeEeccCCCCCC-----cccCCceehhhHHHHHHHhhcccccCceEEEEEEEEEecCCeEEECCCCC
Confidence 9999999999999999999643221 1234699999999999998753 35689999999999999999999875
Q ss_pred ccccccccchhhHHHHHHHHHHHHHHHhhcceEEeecchHHHHHHHHhhhhceeccCCCCCcccCC----CCccceeeec
Q psy9448 506 DDITKLRHTSEYTEEIEKLRRDLQAAREKNGVFLAAENYDQMVNELYAEVTSVEKKSSSPSAAEDQ----PPTKHLILRA 581 (583)
Q Consensus 506 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~e~~~~l~~g~~~r~~~~~~----SSRsH~if~~ 581 (583)
. .++++ +++.+.+++.++.+..|.+++|++.+|+.|..+|+++.|. |||||+||+|
T Consensus 211 ~-~l~i~-------------------ed~~~~v~v~gl~~~~V~s~~e~~~ll~~G~~~R~~~~T~~N~~SSRSH~Ifti 270 (387)
T 2heh_A 211 A-KLRVL-------------------EDGKQQVQVVGLQEHLVNSADDVIKMIDMGSACRTSGQTFANSNSSRSHACFQI 270 (387)
T ss_dssp E-ECEEE-------------------ECTTCCEEEETCCCEEESSHHHHHHHHHHHHHHC---------CGGGSEEEEEE
T ss_pred c-cceEE-------------------EcCCCCEEecCCEEEEeCCHHHHHHHHHHHHhhCCcccCcCcCCcccceEEEEE
Confidence 3 34444 4566778899999999999999999999999999888776 9999999999
Q ss_pred cC
Q psy9448 582 RL 583 (583)
Q Consensus 582 ~~ 583 (583)
.+
T Consensus 271 ~v 272 (387)
T 2heh_A 271 IL 272 (387)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 36
>1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A*
Probab=100.00 E-value=1.1e-42 Score=365.78 Aligned_cols=205 Identities=25% Similarity=0.373 Sum_probs=168.9
Q ss_pred ccccCCCchHHhhccceeeeecCCCceeEEeeecccc------cccccccccccccccccceeehhhhhhhHHHHhcccc
Q psy9448 354 INQKMPLNSVERAAKSCSIVDCSSSREITIKERVNDK------ISKTFGFDRVFSQESKQVDVYKYVVNPLIDEVLSGYN 427 (583)
Q Consensus 354 ~~qk~P~~~~E~a~~~~~iV~~~~~~~~~~~~~~~~~------~~k~f~fD~vf~~~~~q~~vy~~~~~~~v~~~l~G~n 427 (583)
.-+.||++..|...+..++|.+.+..++.+.++.... ..+.|+||+||+++++|++||+.++.|+|+.+|+|||
T Consensus 76 ~vRvRPl~~~E~~~~~~~~v~~~~~~~v~v~~~~~~~~~~~~~~~~~F~FD~VF~~~~tQ~~Vy~~~~~plV~~~l~G~N 155 (410)
T 1v8k_A 76 CVRKRPLNKQELAKKEIDVISVPSKCLLLVHEPKLKVDLTKYLENQAFCFDFAFDETASNEVVYRFTARPLVQTIFEGGK 155 (410)
T ss_dssp EEEECCCCHHHHHTTCCBCEECCSSSEEEEEEEEECTTCCEEEEEEEEECSEEECTTCCHHHHHHHTTHHHHHHHHTTCE
T ss_pred EEEeCCCChhHhhcCCccEEEECCCCEEEEecCcccccccccccceEEeeeEEEecCCChhhhhHHHHHHHHHHHhcCCc
Confidence 4578999999998888888888877777776653221 2468999999999999999999999999999999999
Q ss_pred eeEEEeeccCCCceEEeeccccCCCCcccccCCCCccchhhhhhhhHHhhcc--ccceeEEEEeeeeechHhhhhccCCC
Q psy9448 428 CTVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHLFDELRLL--GDAEFTVRVSFLEIYNEELIDLLSPT 505 (583)
Q Consensus 428 ~~i~ayGqtgsGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~lf~~~~~~--~~~~~~v~~S~~eiy~e~i~DLL~~~ 505 (583)
+||||||||||||||||+|+..... .+...|||||++++||..++.. .+..|.|++||+|||||+|+|||++.
T Consensus 156 ~tifAYGQTGSGKTyTM~G~~~~~~-----~~~~~Giipra~~~lF~~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~ 230 (410)
T 1v8k_A 156 ATCFAYGQTGSGKTHTMGGDLSGKS-----QNASKGIYAMASRDVFLLKNQPRYRNLNLEVYVTFFEIYNGKVFDLLNKK 230 (410)
T ss_dssp EEEEEEESTTSSHHHHHHCBC---------CBGGGSHHHHHHHHHHHHHTSHHHHTTCCEEEEEEEEEETTEEEETTTTT
T ss_pred eeEEeecCCCCCCCeEeecCCCCCC-----ccccCcchhhhHHHHHHHHhhhcccCccEEEEEEEEEeeCCEEEECCCCC
Confidence 9999999999999999999643221 1234699999999999988753 35689999999999999999999875
Q ss_pred ccccccccchhhHHHHHHHHHHHHHHHhhcceEEeecchHHHHHHHHhhhhceeccCCCCCcccCC----CCccceeeec
Q psy9448 506 DDITKLRHTSEYTEEIEKLRRDLQAAREKNGVFLAAENYDQMVNELYAEVTSVEKKSSSPSAAEDQ----PPTKHLILRA 581 (583)
Q Consensus 506 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~e~~~~l~~g~~~r~~~~~~----SSRsH~if~~ 581 (583)
. .++++ +++.+.+++.++.+..|.++++++.+|..|..+|+++.|. |||||+||+|
T Consensus 231 ~-~l~i~-------------------ed~~~~v~V~gl~e~~V~s~~e~~~ll~~G~~~R~~~~T~~N~~SSRSH~Ifti 290 (410)
T 1v8k_A 231 A-KLRVL-------------------EDSRQQVQVVGLQEYLVTCADDVIKMINMGSACRTSGQTFANSNSSRSHACFQI 290 (410)
T ss_dssp E-EEEEE-------------------ECSSCCEEEETCCCEEESSHHHHHHHHHHHHHTCC--------CCCSSEEEEEE
T ss_pred C-CceEE-------------------ECCCCCeEecCCEEEEeCCHHHHHHHHHHHHhhCCcccccCCCCCCCceEEEEE
Confidence 3 34444 4566778899999999999999999999999999888776 9999999998
Q ss_pred cC
Q psy9448 582 RL 583 (583)
Q Consensus 582 ~~ 583 (583)
.+
T Consensus 291 ~v 292 (410)
T 1v8k_A 291 LL 292 (410)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 37
>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ...
Probab=100.00 E-value=2.6e-43 Score=367.45 Aligned_cols=213 Identities=39% Similarity=0.705 Sum_probs=174.7
Q ss_pred cccccCCCchHHhhccceeeeecCC-CceeEEeee--cccccccccccccccccccccceeehhhhhhhHHHHhccccee
Q psy9448 353 EINQKMPLNSVERAAKSCSIVDCSS-SREITIKER--VNDKISKTFGFDRVFSQESKQVDVYKYVVNPLIDEVLSGYNCT 429 (583)
Q Consensus 353 ~~~qk~P~~~~E~a~~~~~iV~~~~-~~~~~~~~~--~~~~~~k~f~fD~vf~~~~~q~~vy~~~~~~~v~~~l~G~n~~ 429 (583)
-.-+.||++..|...+...++.+.. ..++.+... ......+.|+||+||+++++|++||+.++.|+|+.+|+|||+|
T Consensus 12 V~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv~~~l~G~n~t 91 (359)
T 1x88_A 12 VVVRCRPFNLAERKASAHSIVECDPVRKEVSVRTGGLADKSSRKTYTFDMVFGASTKQIDVYRSVVCPILDEVIMGYNCT 91 (359)
T ss_dssp EEEEECCCCHHHHHTTCCCCEEEETTTTEEEEEEEEETTEEEEEEEECSEEECTTCCHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred EEEEeCCCChhhhhcCCceEEEEcCCCcEEEEeCCCccCCcCceEEeceEEEeccCchhHHHHHHHHHhHHHHhCCCceE
Confidence 4557899999999888777777654 345555432 1223457899999999999999999999999999999999999
Q ss_pred EEEeeccCCCceEEeeccccCCCCcccccCCCCccchhhhhhhhHHhhccccceeEEEEeeeeechHhhhhccCCCcc--
Q psy9448 430 VFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHLFDELRLLGDAEFTVRVSFLEIYNEELIDLLSPTDD-- 507 (583)
Q Consensus 430 i~ayGqtgsGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~lf~~~~~~~~~~~~v~~S~~eiy~e~i~DLL~~~~~-- 507 (583)
|||||||||||||||+|....+....+..++..|||||++++||+.+.. .++.|.|++||+|||||+|+|||+|...
T Consensus 92 ifAYGqTGSGKTyTM~G~~~~~~~~~~~~~~~~Giipr~~~~lF~~i~~-~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~ 170 (359)
T 1x88_A 92 IFAYGQTGTGKTFTMEGERSPNEEYTWEEDPLAGIIPRTLHQIFEKLTD-NGTEFSVKVSLLEIYNEELFDLLNPSSDVS 170 (359)
T ss_dssp EEEEECTTSSHHHHHTBCCCGGGCSCGGGCTTBCHHHHHHHHHHHHTSS-SSEEEEEEEEEEEEETTEEEETTCTTSCTT
T ss_pred EEEeCCCCCCCceEEeccCCccccccccccccCCchHHHHHHHHHHHhc-cCceEEEEEEEEEEeCceeeehhccccccc
Confidence 9999999999999999976543333344455679999999999999876 4678999999999999999999998653
Q ss_pred -ccccccchhhHHHHHHHHHHHHHHHhhcceEEeecchHHHHHHHHhhhhceeccCCCCCcccCC----CCccceeeecc
Q psy9448 508 -ITKLRHTSEYTEEIEKLRRDLQAAREKNGVFLAAENYDQMVNELYAEVTSVEKKSSSPSAAEDQ----PPTKHLILRAR 582 (583)
Q Consensus 508 -~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~e~~~~l~~g~~~r~~~~~~----SSRsH~if~~~ 582 (583)
.+++++++ +..+.+++.++.+..|.+++|++.+|+.|..+|+++.|. |||||+||+|.
T Consensus 171 ~~l~i~~~~-----------------~~~~~v~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~ 233 (359)
T 1x88_A 171 ERLQMFDDP-----------------RNKRGVIIKGLEEITVHNKDEVYQILEKGAAKRTTAATLMNAYSSRSHSVFSVT 233 (359)
T ss_dssp CCBEEEEET-----------------TEEEEEEEETCCCEEECSGGGHHHHHHHHHHHHHHHHHHSTTHHHHCEEEEEEE
T ss_pred ccceEEecc-----------------CCCCCEEEcCCEEEEcCCHHHHHHHHHHHHhhcccccccCCCCCCCccEEEEEE
Confidence 34555433 124567889999999999999999999999999887665 99999999986
Q ss_pred C
Q psy9448 583 L 583 (583)
Q Consensus 583 ~ 583 (583)
+
T Consensus 234 i 234 (359)
T 1x88_A 234 I 234 (359)
T ss_dssp E
T ss_pred E
Confidence 4
No 38
>1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens}
Probab=100.00 E-value=8.3e-43 Score=361.98 Aligned_cols=195 Identities=34% Similarity=0.544 Sum_probs=163.2
Q ss_pred ccccCCCchHHhhccceeeeecCC-CceeEEeeecccccccccccccccccccccceeehhhhhhhHHHHhcccceeEEE
Q psy9448 354 INQKMPLNSVERAAKSCSIVDCSS-SREITIKERVNDKISKTFGFDRVFSQESKQVDVYKYVVNPLIDEVLSGYNCTVFA 432 (583)
Q Consensus 354 ~~qk~P~~~~E~a~~~~~iV~~~~-~~~~~~~~~~~~~~~k~f~fD~vf~~~~~q~~vy~~~~~~~v~~~l~G~n~~i~a 432 (583)
.-+.||++..|...+...++.+.. ...+.. ....+.|.||+||+++++|++||+.++.|+|+.+++|||+||||
T Consensus 9 ~vRvRP~~~~E~~~~~~~~v~~~~~~~~i~~-----~~~~~~F~FD~Vf~~~~tQ~~Vy~~~~~plv~~~l~G~n~tifA 83 (349)
T 1t5c_A 9 CVRVRPLNSREESLGETAQVYWKTDNNVIYQ-----VDGSKSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGYNGTIFA 83 (349)
T ss_dssp EEEECCCSCSSCTTTTCCCCCEEEETTEEEE-----TTSSCEEECSCEECTTSCHHHHHHHTTHHHHHHHHTTCCEEEEE
T ss_pred EEECCCCChhhhccCCCcEEEEeCCCCeEEE-----CCCCeEEECCEEECCCCCHHHHHHHHHHHHHHHHHcCCccceee
Confidence 346799999887665544433322 222221 12357899999999999999999999999999999999999999
Q ss_pred eeccCCCceEEeeccccCCCCcccccCCCCccchhhhhhhhHHhhccccceeEEEEeeeeechHhhhhccCCCcc--ccc
Q psy9448 433 YGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHLFDELRLLGDAEFTVRVSFLEIYNEELIDLLSPTDD--ITK 510 (583)
Q Consensus 433 yGqtgsGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~lf~~~~~~~~~~~~v~~S~~eiy~e~i~DLL~~~~~--~~~ 510 (583)
||||||||||||+|..+. .|||||++++||+.++...+..|.|++||+|||||+|+|||++... .++
T Consensus 84 YGqTGSGKTyTM~G~~~~-----------~Giipr~~~~lF~~i~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~l~ 152 (349)
T 1t5c_A 84 YGQTASGKTYTMMGSEDH-----------LGVIPRAIHDIFQKIKKFPDREFLLRVSYMEIYNETITDLLCGTQKMKPLI 152 (349)
T ss_dssp EESTTSSHHHHHTBCSSS-----------BCHHHHHHHHHHHHGGGCTTEEEEEEEEEEEEETTEEEESSSSSCTTCCEE
T ss_pred ecCCCCCCCeEEecCCCC-----------CchHHHHHHHHHHHHHhCcCCcEEEEEEEEEEeCCEEEEccCCCCCCCCce
Confidence 999999999999997543 4999999999999999888889999999999999999999987643 334
Q ss_pred cccchhhHHHHHHHHHHHHHHHhhcceEEeecchHHHHHHHHhhhhceeccCCCCCcccCC----CCccceeeeccC
Q psy9448 511 LRHTSEYTEEIEKLRRDLQAAREKNGVFLAAENYDQMVNELYAEVTSVEKKSSSPSAAEDQ----PPTKHLILRARL 583 (583)
Q Consensus 511 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~e~~~~l~~g~~~r~~~~~~----SSRsH~if~~~~ 583 (583)
++ +++.+.+++.++.+..|.+++|++.+|+.|..+|+++.|. |||||+||+|.+
T Consensus 153 i~-------------------ed~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v 210 (349)
T 1t5c_A 153 IR-------------------EDVNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMIL 210 (349)
T ss_dssp EE-------------------ETTTTEEEETTCCCEECSSHHHHHHHHHHHHHTTSSSSSSSSCTTTTCEEEEEEEE
T ss_pred EE-------------------ECCCCCEEecCCEEEEeCCHHHHHHHHHHhhcccccccccCCCCCCCceEEEEEEE
Confidence 44 4666788899999999999999999999999999888776 999999999863
No 39
>2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C*
Probab=100.00 E-value=8e-43 Score=364.67 Aligned_cols=202 Identities=25% Similarity=0.429 Sum_probs=168.9
Q ss_pred ccccCCCchHHhhccceeeeecCCCceeEEeeecccccccccccccccccc--------cccceeehhhhhhhHHHHhcc
Q psy9448 354 INQKMPLNSVERAAKSCSIVDCSSSREITIKERVNDKISKTFGFDRVFSQE--------SKQVDVYKYVVNPLIDEVLSG 425 (583)
Q Consensus 354 ~~qk~P~~~~E~a~~~~~iV~~~~~~~~~~~~~~~~~~~k~f~fD~vf~~~--------~~q~~vy~~~~~~~v~~~l~G 425 (583)
.-+.||++..|...+..+++.+.+...+...++......+.|+||+||++. ++|++||+.++.|+|+.+|+|
T Consensus 9 ~vRvRP~~~~E~~~~~~~~v~~~~~~~~i~~~~~~~~~~~~f~FD~vf~~~~~~~~~~~asQ~~Vy~~~~~plv~~~l~G 88 (366)
T 2zfi_A 9 AVRVRPFNSREMSRDSKCIIQMSGSTTTIVNPKQPKETPKSFSFDYSYWSHTSPEDINYASQKQVYRDIGEEMLQHAFEG 88 (366)
T ss_dssp EEEECCCCHHHHHTTCCBCEEEETTEEEECCTTCTTSCCEEEECSEEEECSSCTTSSSCCCHHHHHHHTHHHHHHHHHTT
T ss_pred EEECCCCChhhccCCCCeEEEECCCcEEEeccCCCCCCceEEecceEeecCccccccccCcHHHHHHHHHHHHHHHHhcC
Confidence 346799999998888777887766554443333333356789999999987 899999999999999999999
Q ss_pred cceeEEEeeccCCCceEEeeccccCCCCcccccCCCCccchhhhhhhhHHhhcc--ccceeEEEEeeeeechHhhhhccC
Q psy9448 426 YNCTVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHLFDELRLL--GDAEFTVRVSFLEIYNEELIDLLS 503 (583)
Q Consensus 426 ~n~~i~ayGqtgsGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~lf~~~~~~--~~~~~~v~~S~~eiy~e~i~DLL~ 503 (583)
||+||||||||||||||||+|.... ...|||||++++||..++.. .+..|.|++||+|||||+|+|||+
T Consensus 89 ~N~tifAYGqTGSGKTyTm~G~~~~---------~~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~v~DLL~ 159 (366)
T 2zfi_A 89 YNVCIFAYGQTGAGKSYTMMGKQEK---------DQQGIIPQLCEDLFSRINDTTNDNMSYSVEVSYMEIYCERVRDLLN 159 (366)
T ss_dssp CCEEEEEECSTTSSHHHHHTBCSGG---------GCBCHHHHHHHHHHHHHHTCCCTTEEEEEEEEEEEEETTEEEETTC
T ss_pred CeeEEEEeCCCCCCCceEeeCCCcc---------CCCccHHHHHHHHHHHHhhcccCCeeEEEEEEEEEeeCCeEEEccc
Confidence 9999999999999999999997432 12599999999999999764 356899999999999999999999
Q ss_pred CCc-cccccccchhhHHHHHHHHHHHHHHHhhcceEEeecchHHHHHHHHhhhhceeccCCCCCcccCC----CCcccee
Q psy9448 504 PTD-DITKLRHTSEYTEEIEKLRRDLQAAREKNGVFLAAENYDQMVNELYAEVTSVEKKSSSPSAAEDQ----PPTKHLI 578 (583)
Q Consensus 504 ~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~e~~~~l~~g~~~r~~~~~~----SSRsH~i 578 (583)
|.. ..+++++ ++.+.+++.++.+..|.+++|++.+|+.|..+|+++.|. |||||+|
T Consensus 160 ~~~~~~l~ire-------------------~~~~g~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~i 220 (366)
T 2zfi_A 160 PKNKGNLRVRE-------------------HPLLGPYVEDLSKLAVTSYNDIQDLMDSGNKPRTVAATNMNETSSRSHAV 220 (366)
T ss_dssp TTTCSCBCEEE-------------------ETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHTSGGGGTTTHHHHSEEE
T ss_pred cccCCCceEEE-------------------cCCCCEEEeCCEEEEECCHHHHHHHHHHHhhccccccccCCCCCCcceEE
Confidence 864 3455555 455667889999999999999999999999999888776 9999999
Q ss_pred eeccC
Q psy9448 579 LRARL 583 (583)
Q Consensus 579 f~~~~ 583 (583)
|+|.+
T Consensus 221 f~i~v 225 (366)
T 2zfi_A 221 FNIIF 225 (366)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99864
No 40
>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A*
Probab=100.00 E-value=1.7e-42 Score=361.32 Aligned_cols=197 Identities=30% Similarity=0.486 Sum_probs=169.1
Q ss_pred cccccCCCchHHhhccceeeeecCCC---ceeEEeeecccccccccccccccccccccceeehhhhhhhHHHHhccccee
Q psy9448 353 EINQKMPLNSVERAAKSCSIVDCSSS---REITIKERVNDKISKTFGFDRVFSQESKQVDVYKYVVNPLIDEVLSGYNCT 429 (583)
Q Consensus 353 ~~~qk~P~~~~E~a~~~~~iV~~~~~---~~~~~~~~~~~~~~k~f~fD~vf~~~~~q~~vy~~~~~~~v~~~l~G~n~~ 429 (583)
-.-+.||+++.|...+...++.+... ..+.+ ..+.|+||+||+++++|++||+.++.|+|+.+++|||+|
T Consensus 15 V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~i~~-------~~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv~~~l~G~n~t 87 (365)
T 2y65_A 15 VVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISI-------AGKVYLFDKVFKPNASQEKVYNEAAKSIVTDVLAGYNGT 87 (365)
T ss_dssp EEEEECCCCHHHHHTTCCBCEECCSSSTTCEEEE-------TTEEEECSEEECTTCCHHHHHHHHTHHHHHHHHTTCCEE
T ss_pred EEEEcCcCChhHhccCCceEEEeCCCCCCcEEEE-------CCEEEeCceEecCCCCHHHHHHHhhhhHHHHHhCCCceE
Confidence 34578999999988877777766542 33332 247899999999999999999999999999999999999
Q ss_pred EEEeeccCCCceEEeeccccCCCCcccccCCCCccchhhhhhhhHHhhcc-ccceeEEEEeeeeechHhhhhccCCCccc
Q psy9448 430 VFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHLFDELRLL-GDAEFTVRVSFLEIYNEELIDLLSPTDDI 508 (583)
Q Consensus 430 i~ayGqtgsGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~lf~~~~~~-~~~~~~v~~S~~eiy~e~i~DLL~~~~~~ 508 (583)
|||||||||||||||+|....+ ...|||||++++||..+... .++.|.|++||+|||||+|+|||++.+..
T Consensus 88 ifAYGqTGSGKTyTm~G~~~~~--------~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~ 159 (365)
T 2y65_A 88 IFAYGQTSSGKTHTMEGVIGDS--------VKQGIIPRIVNDIFNHIYAMEVNLEFHIKVSYYEIYMDKIRDLLDVSKVN 159 (365)
T ss_dssp EEEECSTTSSHHHHHTBSTTCT--------TTBCHHHHHHHHHHHHHHHCCSCEEEEEEEEEEEEETTEEEETTCTTCCS
T ss_pred EEeecCCCCCCceEEecCCCCc--------ccCChHHHHHHHHHHHHHhccCCceEEEEEEEEEEECCeeeecccCCcCC
Confidence 9999999999999999975432 23599999999999999753 45789999999999999999999988766
Q ss_pred cccccchhhHHHHHHHHHHHHHHHhhcceEEeecchHHHHHHHHhhhhceeccCCCCCcccCC----CCccceeeeccC
Q psy9448 509 TKLRHTSEYTEEIEKLRRDLQAAREKNGVFLAAENYDQMVNELYAEVTSVEKKSSSPSAAEDQ----PPTKHLILRARL 583 (583)
Q Consensus 509 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~e~~~~l~~g~~~r~~~~~~----SSRsH~if~~~~ 583 (583)
+++++ ++.+.+++.++.+..|.++++++.+|+.|..+|+++.|. |||||+||+|.+
T Consensus 160 l~i~e-------------------~~~~~~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v 219 (365)
T 2y65_A 160 LSVHE-------------------DKNRVPYVKGATERFVSSPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINV 219 (365)
T ss_dssp BCEEE-------------------CSSSCEEETTCCCEEECSHHHHHHHHHHHHHHHTTTCSCHHHHHHTSEEEEEEEE
T ss_pred ceEEE-------------------CCCCCEEecCCEEEecCCHHHHHHHHHHHHhhcccccccCCCCCCCceEEEEEEE
Confidence 66665 556777889999999999999999999999999998888 999999999864
No 41
>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9
Probab=100.00 E-value=1.2e-42 Score=361.42 Aligned_cols=202 Identities=31% Similarity=0.547 Sum_probs=172.3
Q ss_pred cccccCCCchHHhhccceeeeecCCCceeEEeeecccccccccccccccccccccceeehhhhhhhHHHHhcccceeEEE
Q psy9448 353 EINQKMPLNSVERAAKSCSIVDCSSSREITIKERVNDKISKTFGFDRVFSQESKQVDVYKYVVNPLIDEVLSGYNCTVFA 432 (583)
Q Consensus 353 ~~~qk~P~~~~E~a~~~~~iV~~~~~~~~~~~~~~~~~~~k~f~fD~vf~~~~~q~~vy~~~~~~~v~~~l~G~n~~i~a 432 (583)
-.-+.||++..|...+...+|.+.+..++.+... ...+.|.||+||+++++|++||+.++.|+|+.+++|||+||||
T Consensus 10 V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~---~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv~~~l~G~n~tifA 86 (355)
T 1goj_A 10 VVARFRPQNRVEIESGGQPIVTFQGPDTCTVDSK---EAQGSFTFDRVFDMSCKQSDIFDFSIKPTVDDILNGYNGTVFA 86 (355)
T ss_dssp EEEEECCCCHHHHTTTCCBCEEECSTTEEEECST---TCCEEEECSEEECTTCCHHHHHHHHTHHHHHHHTTTCCEEEEE
T ss_pred EEEECCCCChHHhhcCCceEEEEcCCCeEEEccC---CCccEEeeCeEECCCCccHHHHHHHHHHHHHHHhCCCcceEEE
Confidence 3457899999999888878888877777655432 3457899999999999999999999999999999999999999
Q ss_pred eeccCCCceEEeeccccCCCCcccccCCCCccchhhhhhhhHHhhcc-ccceeEEEEeeeeechHhhhhccCCCcccccc
Q psy9448 433 YGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHLFDELRLL-GDAEFTVRVSFLEIYNEELIDLLSPTDDITKL 511 (583)
Q Consensus 433 yGqtgsGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~lf~~~~~~-~~~~~~v~~S~~eiy~e~i~DLL~~~~~~~~~ 511 (583)
||||||||||||+|..... +...|||||++++||..+... .+.+|.|++||+|||||+|+|||+|....+++
T Consensus 87 YGqTGSGKTyTm~G~~~~~-------~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~l~i 159 (355)
T 1goj_A 87 YGQTGAGKSYTMMGTSIDD-------PDGRGVIPRIVEQIFTSILSSAANIEYTVRVSYMEIYMERIRDLLAPQNDNLPV 159 (355)
T ss_dssp ECSTTSSHHHHHTBSCTTS-------TTTBCHHHHHHHHHHHHHHTSCTTEEEEEEEEEEEEETTEEEETTSTTCCSCCE
T ss_pred ECCCCCCcceEeecCCCCC-------cccCCchHHHHHHHHHHHHhcccCceEEEEEEEEEEECCEEEEcccCccCCcee
Confidence 9999999999999964321 223599999999999998764 45689999999999999999999998777776
Q ss_pred ccchhhHHHHHHHHHHHHHHHhhcceEEeecchHHHHHHHHhhhhceeccCCCCCcccCC----CCccceeeeccC
Q psy9448 512 RHTSEYTEEIEKLRRDLQAAREKNGVFLAAENYDQMVNELYAEVTSVEKKSSSPSAAEDQ----PPTKHLILRARL 583 (583)
Q Consensus 512 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~e~~~~l~~g~~~r~~~~~~----SSRsH~if~~~~ 583 (583)
++ ++.+.+++.++.+..|.+++|++.+|+.|..+|+++.|. |||||+||+|.+
T Consensus 160 ~e-------------------~~~~g~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v 216 (355)
T 1goj_A 160 HE-------------------EKNRGVYVKGLLEIYVSSVQEVYEVMRRGGNARAVAATNMNQESSRSHSIFVITI 216 (355)
T ss_dssp EE-------------------ETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEEEEE
T ss_pred EE-------------------cCCCCEeecCCEEEeCCCHHHHHHHHHHHHhhcCcccccCCCCCCCceEEEEEEE
Confidence 65 455677889999999999999999999999888776554 999999999864
No 42
>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa}
Probab=100.00 E-value=4.7e-42 Score=366.21 Aligned_cols=201 Identities=25% Similarity=0.411 Sum_probs=166.6
Q ss_pred cccccCCCchHHhhccceeeeecCCC-ceeEEeeecc-------------cccccccccccccccc-------cccceee
Q psy9448 353 EINQKMPLNSVERAAKSCSIVDCSSS-REITIKERVN-------------DKISKTFGFDRVFSQE-------SKQVDVY 411 (583)
Q Consensus 353 ~~~qk~P~~~~E~a~~~~~iV~~~~~-~~~~~~~~~~-------------~~~~k~f~fD~vf~~~-------~~q~~vy 411 (583)
-.-+.||++..|...+..+++.+... ..+++..+.. ....+.|+||+||+++ ++|++||
T Consensus 42 V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~F~FD~vF~~~~~~~~~~asQ~~Vy 121 (443)
T 2owm_A 42 VVVRVRAFLPRELERNAECIVEMDPATERTSLLVPQETDFADARGARSRRVLEEKSFTFDKSFWSHNTEDEHYATQEHVY 121 (443)
T ss_dssp EEEEEECCCHHHHHTTCCCCEEECSSSCEEEECCCC---------------CCCEEEECSEEEEESCTTSTTCCCHHHHH
T ss_pred EEEEeCCCChHHhhcCCceEEEEcCCCccEEEecCCCcccccccccccccccCCceEecCeEeCCCCcCCccCCCHHHHH
Confidence 45578999999988877777766543 3344433211 1135789999999864 8999999
Q ss_pred hhhhhhhHHHHhcccceeEEEeeccCCCceEEeeccccCCCCcccccCCCCccchhhhhhhhHHhhcc----ccceeEEE
Q psy9448 412 KYVVNPLIDEVLSGYNCTVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHLFDELRLL----GDAEFTVR 487 (583)
Q Consensus 412 ~~~~~~~v~~~l~G~n~~i~ayGqtgsGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~lf~~~~~~----~~~~~~v~ 487 (583)
+.++.|+|+.+|+|||+||||||||||||||||+|..+. .|||||++++||..++.. .++.|.|+
T Consensus 122 ~~~~~plv~~~l~GyN~tIfAYGQTGSGKTyTM~G~~~~-----------~GIipr~~~~lF~~i~~~~~~~~~~~~~V~ 190 (443)
T 2owm_A 122 DSLGEEFLDHNFEGYHTCIFAYGQTGSGKSYTMMGTPDQ-----------PGLIPRTCEDLFQRIASAQDETPNISYNVK 190 (443)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEESSTTSSHHHHHTCCTTS-----------CCHHHHHHHHHHHHHHHTTTTSTTCEEEEE
T ss_pred HhhhhhHHHHhhcCCceEEEEeCCCCCCCCEEeecCCCC-----------CchHHHHHHHHHHHHHhhhcccCCceEEEE
Confidence 999999999999999999999999999999999997543 399999999999998754 45789999
Q ss_pred EeeeeechHhhhhccCCCcc-----ccccccchhhHHHHHHHHHHHHHHHhhcceEEeecchHHHHHHHHhhhhceeccC
Q psy9448 488 VSFLEIYNEELIDLLSPTDD-----ITKLRHTSEYTEEIEKLRRDLQAAREKNGVFLAAENYDQMVNELYAEVTSVEKKS 562 (583)
Q Consensus 488 ~S~~eiy~e~i~DLL~~~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~e~~~~l~~g~ 562 (583)
|||+|||||+|+|||+|... .++++ +++.+.+++.++.+..|.+++|++.+|+.|+
T Consensus 191 vS~lEIYnE~i~DLL~~~~~~~~~~~l~ir-------------------e~~~~g~~V~gl~e~~V~s~~e~~~ll~~G~ 251 (443)
T 2owm_A 191 VSYFEVYNEHVRDLLAPVVPNKPPYYLKVR-------------------ESPTEGPYVKDLTEVPVRGLEEIIRWMRIGD 251 (443)
T ss_dssp EEEEEEETTEEEETTSCCCSSCCCCCCEEE-------------------EETTTEEEEETCCCEECCSHHHHHHHHHHHH
T ss_pred EEEEEEECCEeeEccCccccCCccccccee-------------------ECCCCCEeccCCEEEEcCCHHHHHHHHHHHH
Confidence 99999999999999987421 23444 4666788899999999999999999999999
Q ss_pred CCCCcccCC----CCccceeeeccC
Q psy9448 563 SSPSAAEDQ----PPTKHLILRARL 583 (583)
Q Consensus 563 ~~r~~~~~~----SSRsH~if~~~~ 583 (583)
.+|+++.|. |||||+||+|.|
T Consensus 252 ~~R~~~~T~~N~~SSRSH~Ifti~v 276 (443)
T 2owm_A 252 GSRTVASTKMNDTSSRSHAVFTIML 276 (443)
T ss_dssp TTSCBCSSSSSCBCTTEEEEEEEEE
T ss_pred hhCCcccCcCCCccCCCeEEEEEEE
Confidence 999988877 999999999864
No 43
>4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} SCOP: c.37.1.0 PDB: 2xt3_A*
Probab=100.00 E-value=2.1e-42 Score=359.22 Aligned_cols=201 Identities=28% Similarity=0.424 Sum_probs=161.2
Q ss_pred cccccCCCchHHhhccceeeeecCCC-ceeEEeeecccccccccccccccccccccceeehhhhhhhHHHHhcccceeEE
Q psy9448 353 EINQKMPLNSVERAAKSCSIVDCSSS-REITIKERVNDKISKTFGFDRVFSQESKQVDVYKYVVNPLIDEVLSGYNCTVF 431 (583)
Q Consensus 353 ~~~qk~P~~~~E~a~~~~~iV~~~~~-~~~~~~~~~~~~~~k~f~fD~vf~~~~~q~~vy~~~~~~~v~~~l~G~n~~i~ 431 (583)
-.-+.||++..|...+...++.+..+ ..+.+ ...+.|.||+||+++++|++||+.++.|+|+.+|+|||+|||
T Consensus 15 V~vRvRP~~~~E~~~~~~~~~~~~~~~~~~~~------~~~~~f~FD~Vf~~~~~Q~~vy~~~~~plv~~~l~G~n~tif 88 (344)
T 4a14_A 15 VALRVRPLLPKELLHGHQSCLQVEPGLGRVTL------GRDRHFGFHVVLAEDAGQEAVYQACVQPLLEAFFEGFNATVF 88 (344)
T ss_dssp EEEEECCCCHHHHHTTCCBCEEEEGGGTEEEE------TTTEEEECSEEECTTCCHHHHHHHHTHHHHHHHHTTCCEEEE
T ss_pred EEEEecccchHHHhccCeeEEEEcCCCceEEe------cccceEEEEEEEecCcchhHHHHHHHHHHHHHHHhhcCeeEE
Confidence 34478999999987766555544332 22222 135789999999999999999999999999999999999999
Q ss_pred EeeccCCCceEEeeccccCCCCcccccCCCCccchhhhhhhhHHhhccccceeEEEEeeeeechHhhhhccCCCcc--cc
Q psy9448 432 AYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHLFDELRLLGDAEFTVRVSFLEIYNEELIDLLSPTDD--IT 509 (583)
Q Consensus 432 ayGqtgsGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~lf~~~~~~~~~~~~v~~S~~eiy~e~i~DLL~~~~~--~~ 509 (583)
|||||||||||||+|..... ..+...|||||++++||+.++.....+|.|.+||+|||||+|+|||++... .+
T Consensus 89 AYGqTGSGKTyTm~G~~~~~-----~~~~~~Giipr~~~~lF~~i~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~l 163 (344)
T 4a14_A 89 AYGQTGSGKTYTMGEASVAS-----LLEDEQGIVPRAMAEAFKLIDENDLLDCLVHVSYLEVYKEEFRDLLEVGTASRDI 163 (344)
T ss_dssp EESSTTSSHHHHHCC-------------CCCCHHHHHHHHHHHHHHHCTTSEEEEEEEEEEEETTEEEETTSSCCCGGGC
T ss_pred EecccCCCceEeecccchhh-----hhhcccCCchHHHHHHHHhcccccceeeEEEEehhhhhHHHHHHHHHhccccccc
Confidence 99999999999999975321 012345999999999999999888889999999999999999999986542 33
Q ss_pred ccccchhhHHHHHHHHHHHHHHHhhcceEEeecchHHHHHHHHhhhhceeccCCCCCcccCC----CCccceeeeccC
Q psy9448 510 KLRHTSEYTEEIEKLRRDLQAAREKNGVFLAAENYDQMVNELYAEVTSVEKKSSSPSAAEDQ----PPTKHLILRARL 583 (583)
Q Consensus 510 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~e~~~~l~~g~~~r~~~~~~----SSRsH~if~~~~ 583 (583)
++ ++++.+.+++.++.+..|.+++|++.+|+.|..+|+++.|. |||||+||+|.+
T Consensus 164 ~i-------------------~e~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v 222 (344)
T 4a14_A 164 QL-------------------REDERGNVVLCGVKEVDVEGLDEVLSLLEMGNAARHTGATHLNHLSSRSHTVFTVTL 222 (344)
T ss_dssp EE-------------------EECTTSCEEEESCCCEECCSHHHHHHHHHHHHHHHHC------CCGGGSEEEEEEEE
T ss_pred ee-------------------eeccCCCEEEEeeeeccccCHHHHHHHHHhcchhcccCcchhhhcccccceEEEEEe
Confidence 33 44667788899999999999999999999998888777666 999999999864
No 44
>3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} SCOP: c.37.1.9
Probab=100.00 E-value=4.4e-42 Score=357.50 Aligned_cols=198 Identities=26% Similarity=0.448 Sum_probs=153.9
Q ss_pred cccCCCchHHhhccceeeeecCCCceeEEeeec-------cccccccccccccc--------ccccccceeehhhhhhhH
Q psy9448 355 NQKMPLNSVERAAKSCSIVDCSSSREITIKERV-------NDKISKTFGFDRVF--------SQESKQVDVYKYVVNPLI 419 (583)
Q Consensus 355 ~qk~P~~~~E~a~~~~~iV~~~~~~~~~~~~~~-------~~~~~k~f~fD~vf--------~~~~~q~~vy~~~~~~~v 419 (583)
-+.||++.+|...+..+++.+.+.. +.+.++. .....+.|.||+|| ++.++|++||+.++.|+|
T Consensus 7 vRvRPl~~~E~~~~~~~vv~~~~~~-~~~~~~~~~~~~~~~~~~~k~F~FD~vF~~~d~~~~~~~a~Q~~vy~~~~~~lv 85 (354)
T 3gbj_A 7 VRIRPMNRRETDLHTKCVVDVDANK-VILNPVNTNLSKGDARGQPKVFAYDHCFWSMDESVKEKYAGQDIVFKCLGENIL 85 (354)
T ss_dssp EEECCCCHHHHHHTCCBCEEEETTE-EEECCC-----------CCEEEECSEEEECSCTTCTTTBCCHHHHHHHHHHHHH
T ss_pred EECCCCChhhhccCCceEEEeCCCe-EEEeCCccccccccccCCceEEEeeEEeccCccccccccccHHHHHHHhhHHHH
Confidence 4679999999988888888876554 4443321 12245789999999 456889999999999999
Q ss_pred HHHhcccceeEEEeeccCCCceEEeeccccCCCCcccccCCCCccchhhhhhhhHHhhcc--ccceeEEEEeeeeechHh
Q psy9448 420 DEVLSGYNCTVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHLFDELRLL--GDAEFTVRVSFLEIYNEE 497 (583)
Q Consensus 420 ~~~l~G~n~~i~ayGqtgsGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~lf~~~~~~--~~~~~~v~~S~~eiy~e~ 497 (583)
+.+|+|||+||||||||||||||||+|..+. +|||||++++||..+... .+..|.|.+||+|||||+
T Consensus 86 ~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~-----------~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~ 154 (354)
T 3gbj_A 86 QNAFDGYNACIFAYGQTGSGKSYTMMGTADQ-----------PGLIPRLCSGLFERTQKEENEEQSFKVEVSYMEIYNEK 154 (354)
T ss_dssp HHHHTTCCEEEEEEECTTSSHHHHHTBCSSS-----------BCHHHHHHHHHHHHHHHHCBTTEEEEEEEEEEEEETTE
T ss_pred HHHhCCceeEEEeeCCCCCCCceEEecCCCC-----------CchhhHHHHHHHHHHHhhcccccceeeeceeEEEecCe
Confidence 9999999999999999999999999997543 399999999999988643 456899999999999999
Q ss_pred hhhccCCCc--cccccccchhhHHHHHHHHHHHHHHHhhcceEEeecchHHHHHHHHhhhhceeccCCCCCcccCC----
Q psy9448 498 LIDLLSPTD--DITKLRHTSEYTEEIEKLRRDLQAAREKNGVFLAAENYDQMVNELYAEVTSVEKKSSSPSAAEDQ---- 571 (583)
Q Consensus 498 i~DLL~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~e~~~~l~~g~~~r~~~~~~---- 571 (583)
|+|||+|.. ..++++ +++.+.+++.++.+..|.+++|++.+|+.|..+|+++.|.
T Consensus 155 i~DLL~~~~~~~~l~i~-------------------e~~~~g~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~ 215 (354)
T 3gbj_A 155 VRDLLDPKGSRQTLKVR-------------------EHSVLGPYVDGLSKLAVTSYKDIESLMSEGNKSRTVAATNMNEE 215 (354)
T ss_dssp EEETTC------CBCBC-------------------------CCBTTCCCEEECSHHHHHHHHHHHHHCC----------
T ss_pred eeEccCCCCCCcceEEE-------------------EcCCCCEEEEeeEEEecCCHHHHHHHHHHHHhcCCeeecCCCCC
Confidence 999998753 234444 4455566788999999999999999999999999888776
Q ss_pred CCccceeeeccC
Q psy9448 572 PPTKHLILRARL 583 (583)
Q Consensus 572 SSRsH~if~~~~ 583 (583)
|||||+||+|.+
T Consensus 216 SSRSH~if~i~v 227 (354)
T 3gbj_A 216 SSRSHAVFKITL 227 (354)
T ss_dssp CTTSEEEEEEEE
T ss_pred CCcccEEEEEEE
Confidence 999999999864
No 45
>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A*
Probab=100.00 E-value=1e-41 Score=355.48 Aligned_cols=197 Identities=27% Similarity=0.464 Sum_probs=164.5
Q ss_pred ccccCCCchHHhhccceeeeecCCCceeEEeeecccccccccccccccccccccceeehhhhhhhHHHHhcccceeEEEe
Q psy9448 354 INQKMPLNSVERAAKSCSIVDCSSSREITIKERVNDKISKTFGFDRVFSQESKQVDVYKYVVNPLIDEVLSGYNCTVFAY 433 (583)
Q Consensus 354 ~~qk~P~~~~E~a~~~~~iV~~~~~~~~~~~~~~~~~~~k~f~fD~vf~~~~~q~~vy~~~~~~~v~~~l~G~n~~i~ay 433 (583)
.-+.||++..|...+.+.++...+..+ +..+......+.|.||+||+++++|++||+. +.|+|+.+++|||+|||||
T Consensus 10 ~vRvRP~~~~E~~~~~~~~~~~~~~~~--v~~~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~-~~~lv~~~l~G~n~tifAY 86 (369)
T 3cob_A 10 YCRLRPLCEKEIIAKERNAIRSVDEFT--VEHLWKDDKAKQHMYDRVFDGNATQDDVFED-TKYLVQSAVDGYNVCIFAY 86 (369)
T ss_dssp EEEECCCCHHHHHTTCCBCEEECSSSE--EEEECTTSCEEEEECSEEECTTCCHHHHHHT-TTHHHHHHHTTCEEEEEEE
T ss_pred EEECCCCChhhccCCCcEEEEcCCcEE--EEecCCCCCceEEecCEEECCCCCcceehhh-hhhhhHhhhcCCceEEEEE
Confidence 446899999998777665554433333 3333333345899999999999999999999 6999999999999999999
Q ss_pred eccCCCceEEeeccccCCCCcccccCCCCccchhhhhhhhHHhhcccc-ceeEEEEeeeeechHhhhhccCCCcc---cc
Q psy9448 434 GQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHLFDELRLLGD-AEFTVRVSFLEIYNEELIDLLSPTDD---IT 509 (583)
Q Consensus 434 GqtgsGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~lf~~~~~~~~-~~~~v~~S~~eiy~e~i~DLL~~~~~---~~ 509 (583)
|||||||||||+|+... +|||||++++||+.+..... +.|.|++||+|||||+|+|||.|... .+
T Consensus 87 GqTGSGKTyTM~G~~~~-----------~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~l 155 (369)
T 3cob_A 87 GQTGSGKTFTIYGADSN-----------PGLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQDTLVDLLLPKQAKRLKL 155 (369)
T ss_dssp ECTTSSHHHHHTBCSSS-----------BCHHHHHHHHHHHHHHHTTTTEEEEEEEEEEEECSSCEEESSCCSSSCCCCC
T ss_pred CCCCCCCeEeecCCCCC-----------CchhHHHHHHHHHHHHhhccCceeEEEEEEEEEeCceeeecCCCcccCCcce
Confidence 99999999999997643 49999999999999977544 68999999999999999999998542 33
Q ss_pred ccccchhhHHHHHHHHHHHHHHHhhcceEEeecchHHHHHHHHhhhhceeccCCCCCcccCC----CCccceeeeccC
Q psy9448 510 KLRHTSEYTEEIEKLRRDLQAAREKNGVFLAAENYDQMVNELYAEVTSVEKKSSSPSAAEDQ----PPTKHLILRARL 583 (583)
Q Consensus 510 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~e~~~~l~~g~~~r~~~~~~----SSRsH~if~~~~ 583 (583)
.++ +++.+.+++.++.+..|.++++++.+|+.|..+|+++.|. |||||+||+|.+
T Consensus 156 ~i~-------------------e~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v 214 (369)
T 3cob_A 156 DIK-------------------KDSKGMVSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVII 214 (369)
T ss_dssp EEE-------------------ECTTSCEEEETCCCEEECSHHHHHHHHHHHHHHTCCCSCCTTCHHHHSEEEEEEEE
T ss_pred EEE-------------------ECCCCCEEccCCEEEEeCCHHHHHHHHHHHhhcceeecccCCCCCCcceEEEEEEE
Confidence 444 4567778899999999999999999999999999888776 999999999864
No 46
>1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9
Probab=100.00 E-value=6.7e-42 Score=356.21 Aligned_cols=203 Identities=26% Similarity=0.375 Sum_probs=164.9
Q ss_pred cccCCCchHHhhccceeeeecCCCceeEEeeeccc------ccccccccccccccccccceeehhhhhhhHHHHhc-ccc
Q psy9448 355 NQKMPLNSVERAAKSCSIVDCSSSREITIKERVND------KISKTFGFDRVFSQESKQVDVYKYVVNPLIDEVLS-GYN 427 (583)
Q Consensus 355 ~qk~P~~~~E~a~~~~~iV~~~~~~~~~~~~~~~~------~~~k~f~fD~vf~~~~~q~~vy~~~~~~~v~~~l~-G~n 427 (583)
-+.||++..|...+..++|.+.+..++.+.++... ...+.|.||+||+++++|++||+.++.|+|++++. |||
T Consensus 6 vRvRP~~~~E~~~~~~~~v~~~~~~~i~i~~~~~~~~~~~~~~~~~F~FD~Vf~~~~~Q~~Vy~~~~~plv~~~~~~G~n 85 (360)
T 1ry6_A 6 VRKRPLSELEKKKKDSDIITVKNNCTLYIDEPRYKVDMTKYIERHEFIVDKVFDDTVDNFTVYENTIKPLIIDLYENGCV 85 (360)
T ss_dssp EEECCCCHHHHHTTCCBCEEEEETTEEEEEEEEEETTTEEEEEEEEEECSEEECTTCCHHHHHHHHTHHHHHHHHHHCCE
T ss_pred EECCCCChHHhccCCceEEEECCCCEEEEeCCccccccccccccceEEeeeEecCCCCHHHHHHHHhhhhhhhhccCCce
Confidence 36799999999888888888888888888766421 13468999999999999999999999999999995 999
Q ss_pred eeEEEeeccCCCceEEeeccccCCCCcccccCCCCccchhhhhhhhHHhhcc-ccceeEEEEeeeeechHhhhhccCCCc
Q psy9448 428 CTVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHLFDELRLL-GDAEFTVRVSFLEIYNEELIDLLSPTD 506 (583)
Q Consensus 428 ~~i~ayGqtgsGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~lf~~~~~~-~~~~~~v~~S~~eiy~e~i~DLL~~~~ 506 (583)
|||||||||||||||||+|..... ....+|||||++++||..++.. .+..|.|++||+|||||+|+|||++.+
T Consensus 86 ~tifAYGqTGSGKTyTM~G~~~~~------~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~v~DLL~~~~ 159 (360)
T 1ry6_A 86 CSCFAYGQTGSGKTYTMLGSQPYG------QSDTPGIFQYAAGDIFTFLNIYDKDNTKGIFISFYEIYCGKLYDLLQKRK 159 (360)
T ss_dssp EEEEEECCTTSSHHHHHHBSSSTT------TSSCBCHHHHHHHHHHHHHHHHCSSSCEEEEEEEEEEETTEEEESCCC--
T ss_pred eEEEeeCCCCCCCCEEEecCCCCC------CccCCCcHHHHHHHHHHHHHhhccCCceEEEEEEEEeeCCeeEEcccCCc
Confidence 999999999999999999975321 1234699999999999998763 456899999999999999999998743
Q ss_pred cccccccchhhHHHHHHHHHHHHHHHhhcceEEeecchHHHHHHHHhhhhceeccCCCCCcccCC----CCccceeeecc
Q psy9448 507 DITKLRHTSEYTEEIEKLRRDLQAAREKNGVFLAAENYDQMVNELYAEVTSVEKKSSSPSAAEDQ----PPTKHLILRAR 582 (583)
Q Consensus 507 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~e~~~~l~~g~~~r~~~~~~----SSRsH~if~~~ 582 (583)
. +.+.++..+.+++.++.+..|.+.+|++.+|..|..+|+++.|. |||||+||+|+
T Consensus 160 ~--------------------~~~~e~~~~~~~v~gl~~~~V~s~~e~~~~l~~g~~~R~~~~T~~N~~SSRSH~if~i~ 219 (360)
T 1ry6_A 160 M--------------------VAALENGKKEVVVKDLKILRVLTKEELILKMIDGVLLRKIGVNSQNDESSRSHAILNID 219 (360)
T ss_dssp -----------------------------CCBCGGGSCCEEECSHHHHHHHHHHHHHHHHHCTTCCTTGGGGSEEEEEEE
T ss_pred c--------------------ceeeEcCCCCEEEcCcEEEEeCCHHHHHHHHHHHhhhhhcccccccCCCccceEEEEEE
Confidence 1 22345667778889999999999999999999988888777665 99999999997
Q ss_pred C
Q psy9448 583 L 583 (583)
Q Consensus 583 ~ 583 (583)
+
T Consensus 220 v 220 (360)
T 1ry6_A 220 L 220 (360)
T ss_dssp E
T ss_pred E
Confidence 4
No 47
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=100.00 E-value=4.4e-41 Score=355.61 Aligned_cols=201 Identities=29% Similarity=0.482 Sum_probs=161.1
Q ss_pred cccccCCCchHHhhccceeeeecCCCceeEEeeeccc----ccccccccccccccccccceeehhhhhhhHHHHhcccce
Q psy9448 353 EINQKMPLNSVERAAKSCSIVDCSSSREITIKERVND----KISKTFGFDRVFSQESKQVDVYKYVVNPLIDEVLSGYNC 428 (583)
Q Consensus 353 ~~~qk~P~~~~E~a~~~~~iV~~~~~~~~~~~~~~~~----~~~k~f~fD~vf~~~~~q~~vy~~~~~~~v~~~l~G~n~ 428 (583)
-.-+.||+...|.....+. +...+..++.+..+... ...+.|+||+||+++++|++||+. +.|+|+.+|+|||+
T Consensus 63 V~vRvRP~~~~E~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~F~FD~VF~~~~~Q~~Vf~~-v~plv~~~l~G~n~ 140 (412)
T 3u06_A 63 VFCRIRPPLESEENRMCCT-WTYHDESTVELQSIDAQAKSKMGQQIFSFDQVFHPLSSQSDIFEM-VSPLIQSALDGYNI 140 (412)
T ss_dssp EEEEECCCCGGGTTSCBCE-EEEEETTEEEEECCC-------CCCEEECSEEECTTCCHHHHHTT-THHHHHHHHTTCCE
T ss_pred EEEEcCCCCchhccCcceE-EEecCCCEEEEecCCcccccccCceEEeeCeEcCCCCCHHHHHHH-HHHHHHHHHCCCce
Confidence 3457899998887665443 33345566666543221 124689999999999999999985 67999999999999
Q ss_pred eEEEeeccCCCceEEeeccccCCCCcccccCCCCccchhhhhhhhHHhhcc--ccceeEEEEeeeeechHhhhhccCCCc
Q psy9448 429 TVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHLFDELRLL--GDAEFTVRVSFLEIYNEELIDLLSPTD 506 (583)
Q Consensus 429 ~i~ayGqtgsGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~lf~~~~~~--~~~~~~v~~S~~eiy~e~i~DLL~~~~ 506 (583)
||||||||||||||||+|.... .|||||++++||..+... .++.|.|++||+|||||+|+|||++..
T Consensus 141 tifAYGqTGSGKTyTM~G~~~~-----------~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~ 209 (412)
T 3u06_A 141 CIFAYGQTGSGKTYTMDGVPES-----------VGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEIYNEVLYDLLSNEQ 209 (412)
T ss_dssp EEEEESSTTSSHHHHHTEETTE-----------ECHHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEEETTEEEETTCCSC
T ss_pred EEEEecCCCCCCeeEecCCCCC-----------CccHHHHHHHHHHhhhhhcccCceEEEEEEEEEEeCCeeEEcCCCCC
Confidence 9999999999999999997543 399999999999999753 457999999999999999999999877
Q ss_pred cccccccchhhHHHHHHHHHHHHHHHhhcceEEeecchHHHHHHHHhhhhceeccCCCCCcccCC----CCccceeeecc
Q psy9448 507 DITKLRHTSEYTEEIEKLRRDLQAAREKNGVFLAAENYDQMVNELYAEVTSVEKKSSSPSAAEDQ----PPTKHLILRAR 582 (583)
Q Consensus 507 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~e~~~~l~~g~~~r~~~~~~----SSRsH~if~~~ 582 (583)
....++. .++..+.+++.++.+..|.++++++.+|..|..+|+++.|. |||||+||+|.
T Consensus 210 ~~~~i~~-----------------~~~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~ 272 (412)
T 3u06_A 210 KDMEIRM-----------------AKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATASTAGNERSSRSHAVTKLE 272 (412)
T ss_dssp CCCCEEE-----------------CSSCTTSEEETTCCCEECCSHHHHHHHHHHHHHHCC-----CHHHHTTCEEEEEEE
T ss_pred CCceeee-----------------eecCCCCEEEcceEEEEeCCHHHHHHHHHHHHhcccccccCCCCCCcCceEEEEEE
Confidence 6665553 22455677899999999999999999999999999998888 99999999986
Q ss_pred C
Q psy9448 583 L 583 (583)
Q Consensus 583 ~ 583 (583)
+
T Consensus 273 v 273 (412)
T 3u06_A 273 L 273 (412)
T ss_dssp E
T ss_pred E
Confidence 4
No 48
>2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens}
Probab=100.00 E-value=2.4e-41 Score=348.71 Aligned_cols=198 Identities=30% Similarity=0.464 Sum_probs=160.0
Q ss_pred ccccCCCchHHhhcc-ceeee--ecCCCceeEEeeecccccccccccccccccccccceeehhhhhhhHHHHhcccceeE
Q psy9448 354 INQKMPLNSVERAAK-SCSIV--DCSSSREITIKERVNDKISKTFGFDRVFSQESKQVDVYKYVVNPLIDEVLSGYNCTV 430 (583)
Q Consensus 354 ~~qk~P~~~~E~a~~-~~~iV--~~~~~~~~~~~~~~~~~~~k~f~fD~vf~~~~~q~~vy~~~~~~~v~~~l~G~n~~i 430 (583)
.-+.||++..|.... ...++ +..+...+.+.+. ...+.|.||+||+++++|++||+. +.|+|+.+++|||+||
T Consensus 9 ~vRvRP~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~f~FD~Vf~~~~~Q~~Vy~~-v~~lv~~~l~G~n~ti 84 (330)
T 2h58_A 9 IARVRPVTKEDGEGPEATNAVTFDADDDSIIHLLHK---GKPVSFELDKVFSPQASQQDVFQE-VQALVTSCIDGFNVCI 84 (330)
T ss_dssp EEEECCCCGGGCSSGGGSBCEEECSSCTTEEEEEET---TEEEEEECSEEECTTCCHHHHHTT-THHHHHHHHTTCCEEE
T ss_pred EEEcCCCChhhcccCCCccEEEEeCCCCcEEEEcCC---CCeeEEecCeEeCCCCCcHhHHHH-HHHHHHHHhCCCEEEE
Confidence 346799998886432 22233 3333444443332 235789999999999999999998 5899999999999999
Q ss_pred EEeeccCCCceEEeeccccCCCCcccccCCCCccchhhhhhhhHHhhcc-ccceeEEEEeeeeechHhhhhccCCCc-cc
Q psy9448 431 FAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHLFDELRLL-GDAEFTVRVSFLEIYNEELIDLLSPTD-DI 508 (583)
Q Consensus 431 ~ayGqtgsGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~lf~~~~~~-~~~~~~v~~S~~eiy~e~i~DLL~~~~-~~ 508 (583)
||||||||||||||+|+... +|||||++++||..++.. .++.|.|++||+|||||+|+|||++.. ..
T Consensus 85 fAYGqTGSGKTyTm~G~~~~-----------~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~ 153 (330)
T 2h58_A 85 FAYGQTGAGKTYTMEGTAEN-----------PGINQRALQLLFSEVQEKASDWEYTITVSAAEIYNEVLRDLLGKEPQEK 153 (330)
T ss_dssp EEESSTTSSHHHHHTBCSSS-----------BCHHHHHHHHHHHHHHTSCTTEEEEEEEEEEEEETTEEEETTSCSSCCC
T ss_pred EeECCCCCCCcEEEecCCCC-----------CcHHHHHHHHHHHhhhcccCCceEEEEEEEEEEECCChhhccccccccc
Confidence 99999999999999997543 399999999999999764 456899999999999999999998753 23
Q ss_pred cccccchhhHHHHHHHHHHHHHHHhhcceEEeecchHHHHHHHHhhhhceeccCCCCCcccCC----CCccceeeeccC
Q psy9448 509 TKLRHTSEYTEEIEKLRRDLQAAREKNGVFLAAENYDQMVNELYAEVTSVEKKSSSPSAAEDQ----PPTKHLILRARL 583 (583)
Q Consensus 509 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~e~~~~l~~g~~~r~~~~~~----SSRsH~if~~~~ 583 (583)
+.++. .++..+.+++.++.+..|.+++|++.+|+.|..+|+++.|. |||||+||+|.+
T Consensus 154 l~i~~-----------------~~~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v 215 (330)
T 2h58_A 154 LEIRL-----------------CPDGSGQLYVPGLTEFQVQSVDDINKVFEFGHTNRTTEFTNLNEHSSRSHALLIVTV 215 (330)
T ss_dssp CCCEE-----------------CTTSSCCEECTTCCCEEECSHHHHHHHHHHHHHHTTCTTCCSCSCGGGSEEEEEEEE
T ss_pred ceEEE-----------------eecCCCCEecCCCEEEEeCCHHHHHHHHHHHHhhCCcccccCCCCcCCccEEEEEEE
Confidence 33432 24567788899999999999999999999999888887776 999999999864
No 49
>3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii}
Probab=100.00 E-value=9.3e-41 Score=347.23 Aligned_cols=208 Identities=22% Similarity=0.367 Sum_probs=150.3
Q ss_pred ccccCCCchHHhhccceeeeecC----CCceeEEeeecccccccccccccccccccccceeehhhhhhhHHHHhccccee
Q psy9448 354 INQKMPLNSVERAAKSCSIVDCS----SSREITIKERVNDKISKTFGFDRVFSQESKQVDVYKYVVNPLIDEVLSGYNCT 429 (583)
Q Consensus 354 ~~qk~P~~~~E~a~~~~~iV~~~----~~~~~~~~~~~~~~~~k~f~fD~vf~~~~~q~~vy~~~~~~~v~~~l~G~n~~ 429 (583)
.-+-||++..|.......+++.. +.+.+.+..+.+....+.|.||+||+++++|++||+. +.|+|+++++|||+|
T Consensus 10 ~vRvRP~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~FD~Vf~~~~~Q~~vf~~-v~~lv~~~l~G~n~t 88 (349)
T 3t0q_A 10 YCRVRPPLLNEPQDMSHILIEKFNEAKGAQSLTINRNEGRILSYNFQFDMIFEPSHTNKEIFEE-IRQLVQSSLDGYNVC 88 (349)
T ss_dssp EEEECCCCTTSCCCCTTEEECCCBC--CBEEEEEEECC--CEEEEEEESEEECTTCCHHHHHHH-HHHHHHGGGTTCEEE
T ss_pred EEEeCCCCccccccCceEEEeeccCCCCceEEEEcCCCCcccceeeecCEEECCCccHHHHHHH-HHHHHHHHHCCccee
Confidence 34678998888776655555432 2345666655444456789999999999999999998 579999999999999
Q ss_pred EEEeeccCCCceEEeeccccCCCCcccccCCCCccchhhhhhhhHHhhcc--ccceeEEEEeeeeechHhhhhccCCCcc
Q psy9448 430 VFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHLFDELRLL--GDAEFTVRVSFLEIYNEELIDLLSPTDD 507 (583)
Q Consensus 430 i~ayGqtgsGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~lf~~~~~~--~~~~~~v~~S~~eiy~e~i~DLL~~~~~ 507 (583)
|||||||||||||||+|+. .|||||++++||+.++.. .++.|.|.+||+|||||+|+|||.+...
T Consensus 89 ifAYGqTGSGKTyTm~g~~-------------~Giipr~~~~lF~~~~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~ 155 (349)
T 3t0q_A 89 IFAYGQTGSGKTYTMLNAG-------------DGMIPMTLSHIFKWTANLKERGWNYEMECEYIEIYNETILDLLRDFKS 155 (349)
T ss_dssp EEEECSTTSSHHHHHHSTT-------------TSHHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEEETTEEEETTC----
T ss_pred EEEeCCCCCCCceEeCCCC-------------CchhhHHHHHHHHHHHHhhhcCceeEEEEEEEEEEcchhhcccccccc
Confidence 9999999999999999852 299999999999988753 4568999999999999999999987543
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHh-hcceEEeecchHHHHHHHHhhhhceeccCCCCCcccCC----CCccceeeecc
Q psy9448 508 ITKLRHTSEYTEEIEKLRRDLQAARE-KNGVFLAAENYDQMVNELYAEVTSVEKKSSSPSAAEDQ----PPTKHLILRAR 582 (583)
Q Consensus 508 ~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~e~~~~l~~g~~~r~~~~~~----SSRsH~if~~~ 582 (583)
.....+. .....+.++++ ..+.+++.++.+..|.++++++.+|..|..+|+++.|. |||||+||+|.
T Consensus 156 ~~~~~~~--------~~~~~~~i~~~~~~~g~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~ 227 (349)
T 3t0q_A 156 HDNIDEI--------LDSQKHDIRHDHEKQGTYITNVTRMKMTSTSQVDTILKKASKMRSTAATRSNERSSRSHSVFMVH 227 (349)
T ss_dssp -------------------CCCEEEETTTTEEEETTCCCEECCCHHHHHHHHHHC------------CTGGGSEEEEEEE
T ss_pred ccccccc--------cccccceeEEecCCCCEEEeCCEEEEeCCHHHHHHHHHHHHHhCcccccccccccCCcceEEEEE
Confidence 2111100 00111122223 34567899999999999999999999999999988776 99999999986
Q ss_pred C
Q psy9448 583 L 583 (583)
Q Consensus 583 ~ 583 (583)
+
T Consensus 228 v 228 (349)
T 3t0q_A 228 I 228 (349)
T ss_dssp E
T ss_pred E
Confidence 4
No 50
>1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A*
Probab=100.00 E-value=1.2e-40 Score=345.76 Aligned_cols=205 Identities=27% Similarity=0.437 Sum_probs=147.7
Q ss_pred cccCCCch-HHhhccceeeeec----CCCceeEEeeecccccccccccccccccccccceeehhhhhhhHHHHhccccee
Q psy9448 355 NQKMPLNS-VERAAKSCSIVDC----SSSREITIKERVNDKISKTFGFDRVFSQESKQVDVYKYVVNPLIDEVLSGYNCT 429 (583)
Q Consensus 355 ~qk~P~~~-~E~a~~~~~iV~~----~~~~~~~~~~~~~~~~~k~f~fD~vf~~~~~q~~vy~~~~~~~v~~~l~G~n~~ 429 (583)
-+.||++. .|........+.. .+.+++.+..+.+....+.|.||+||+++++|++||+. +.|+|+.+++|||+|
T Consensus 9 vRvRP~~~~~e~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~-v~~lv~~~l~G~n~t 87 (347)
T 1f9v_A 9 CRIRPALKNLENSDTSLINVNEFDDNSGVQSMEVTKIQNTAQVHEFKFDKIFDQQDTNVDVFKE-VGQLVQSSLDGYNVC 87 (347)
T ss_dssp EEECCCCTTTCCCTTEEEEECCCBTTTTBEEEEEEEGGGTTCEEEEEESEEECTTCCHHHHHHH-HHHHHGGGGGTCCEE
T ss_pred EEeCCCCcccccCCCceEEEecccCCCCceEEEEecCCCCcCceEEeeCEEECCCCCHHHHHHH-HHHHHHHhcCCceeE
Confidence 35688876 4433332222221 12345666655444456899999999999999999998 579999999999999
Q ss_pred EEEeeccCCCceEEeeccccCCCCcccccCCCCccchhhhhhhhHHhhcc--ccceeEEEEeeeeechHhhhhccCCCcc
Q psy9448 430 VFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHLFDELRLL--GDAEFTVRVSFLEIYNEELIDLLSPTDD 507 (583)
Q Consensus 430 i~ayGqtgsGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~lf~~~~~~--~~~~~~v~~S~~eiy~e~i~DLL~~~~~ 507 (583)
|||||||||||||||+|+. .|||||++++||+.++.. .++.|.|++||+|||||+|+|||++...
T Consensus 88 ifAYGqTGSGKTyTM~G~~-------------~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~ 154 (347)
T 1f9v_A 88 IFAYGQTGSGKTFTMLNPG-------------DGIIPSTISHIFNWINKLKTKGWDYKVNCEFIEIYNENIVDLLRSDNN 154 (347)
T ss_dssp EEEECCTTSSHHHHHHSTT-------------TSHHHHHHHHHHHHHHHHGGGTCEEEEEEEEEEEETTEEEETTC----
T ss_pred EEEECCCCCCCcEeccCCC-------------CCchHHHHHHHHHHHHhhhhcCCceEEEEEEEEEECCeeeeccCCccc
Confidence 9999999999999999842 399999999999998753 4568999999999999999999988653
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHh-hcceEEeecchHHHHHHHHhhhhceeccCCCCCcccCC----CCccceeeecc
Q psy9448 508 ITKLRHTSEYTEEIEKLRRDLQAARE-KNGVFLAAENYDQMVNELYAEVTSVEKKSSSPSAAEDQ----PPTKHLILRAR 582 (583)
Q Consensus 508 ~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~e~~~~l~~g~~~r~~~~~~----SSRsH~if~~~ 582 (583)
..... .....+.++++ ..+.+++.++.+..|.+.++++.+|+.|..+|+++.|. |||||+||+|.
T Consensus 155 ~~~~~----------~~~~~~~i~~~~~~~~~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~ 224 (347)
T 1f9v_A 155 NKEDT----------SIGLKHEIRHDQETKTTTITNVTSCKLESEEMVEIILKKANKLRSTASTASNEHSSASHSIFIIH 224 (347)
T ss_dssp -------------------CCCEEEETTTTEEEETTCCCEECSSGGGHHHHHHHHC-----------CCGGGSEEEEEEE
T ss_pred ccccc----------ccCCceeEEEecCCCceEecCCEEEEcCCHHHHHHHHHHHHhccceeeccCCCCCCCceEEEEEE
Confidence 21000 00011122223 45678899999999999999999999999999988776 99999999997
Q ss_pred C
Q psy9448 583 L 583 (583)
Q Consensus 583 ~ 583 (583)
+
T Consensus 225 v 225 (347)
T 1f9v_A 225 L 225 (347)
T ss_dssp E
T ss_pred E
Confidence 4
No 51
>2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens}
Probab=100.00 E-value=4e-41 Score=351.96 Aligned_cols=205 Identities=26% Similarity=0.418 Sum_probs=155.9
Q ss_pred ccccCCCchHHhhccceee-eec------CCCceeEEeeecc----------cccccccccccccccccccceeehhhhh
Q psy9448 354 INQKMPLNSVERAAKSCSI-VDC------SSSREITIKERVN----------DKISKTFGFDRVFSQESKQVDVYKYVVN 416 (583)
Q Consensus 354 ~~qk~P~~~~E~a~~~~~i-V~~------~~~~~~~~~~~~~----------~~~~k~f~fD~vf~~~~~q~~vy~~~~~ 416 (583)
.-+.||++..|.......+ +.. .+..++.+..+.. ....+.|+||+||+++++|++||+.+ .
T Consensus 27 ~vRvRP~~~~E~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~F~FD~Vf~~~~~Q~~Vy~~v-~ 105 (376)
T 2rep_A 27 FCRVRPVLPGEPTPPPGLLLFPSGPGGPSDPPTRLSLSRSDERRGTLSGAPAPPPRHDFSFDRVFPPGSGQDEVFEEI-A 105 (376)
T ss_dssp EEEECCCCTTSCCCCGGGSBCCC------CCCCEEECCC-----------------CEEECSEEECTTCCHHHHHHHH-H
T ss_pred EEEcCCCChhhcccCCceEEEccCcccccCCCcEEEEecCCccccccccccCCCCceeeeecEEcCCcccchhhhhhH-H
Confidence 4467999988876643222 111 2345555543211 12346899999999999999999984 6
Q ss_pred hhHHHHhcccceeEEEeeccCCCceEEeeccccCCCCcccccCCCCccchhhhhhhhHHhhcc--ccceeEEEEeeeeec
Q psy9448 417 PLIDEVLSGYNCTVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHLFDELRLL--GDAEFTVRVSFLEIY 494 (583)
Q Consensus 417 ~~v~~~l~G~n~~i~ayGqtgsGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~lf~~~~~~--~~~~~~v~~S~~eiy 494 (583)
|+|+.+|+|||+||||||||||||||||+|....+ +...|||||++++||+.++.. .++.|.|++||+|||
T Consensus 106 ~lv~~~l~G~N~tifAYGqTGSGKTyTM~G~~~~~-------~~~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIY 178 (376)
T 2rep_A 106 MLVQSALDGYPVCIFAYGQTGSGKTFTMEGGPGGD-------PQLEGLIPRALRHLFSVAQELSGQGWTYSFVASYVEIY 178 (376)
T ss_dssp HHHHGGGGTCCEEEEEECSTTSSHHHHHTBCSSCC-------GGGBCHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEEEE
T ss_pred HHHHHhcCCCceEEEEeCCCCCCCceEeecCCCCC-------cccCCcHHHHHHHHHHHHHHhhcCCeEEEEEEEEEEEE
Confidence 99999999999999999999999999999975432 123599999999999998753 457999999999999
Q ss_pred hHhhhhccCCCcc-----ccccccchhhHHHHHHHHHHHHHHHhhcceEEeecchHHHHHHHHhhhhceeccCCCCCccc
Q psy9448 495 NEELIDLLSPTDD-----ITKLRHTSEYTEEIEKLRRDLQAAREKNGVFLAAENYDQMVNELYAEVTSVEKKSSSPSAAE 569 (583)
Q Consensus 495 ~e~i~DLL~~~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~e~~~~l~~g~~~r~~~~ 569 (583)
||+|+|||++... .++++++. +..+.+++.++.+..|.+++|++.+|+.|+.+|+++.
T Consensus 179 nE~i~DLL~~~~~~~~~~~l~ir~~~-----------------~~~~~~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~ 241 (376)
T 2rep_A 179 NETVRDLLATGTRKGQGGECEIRRAG-----------------PGSEELTVTNARYVPVSCEKEVDALLHLARQNRAVAR 241 (376)
T ss_dssp TTEEEETTCCC--------CCEEEC--------------------CCCEEETTCCCEEECSHHHHHHHHHHHHHHHHHCC
T ss_pred CCEeeEccccccccccCCCceEEecc-----------------CCCCCEEECCcEEEEeCCHHHHHHHHHHHHhhccccc
Confidence 9999999988532 22333311 1456788999999999999999999999998888777
Q ss_pred CC----CCccceeeeccC
Q psy9448 570 DQ----PPTKHLILRARL 583 (583)
Q Consensus 570 ~~----SSRsH~if~~~~ 583 (583)
|. |||||+||+|++
T Consensus 242 T~~N~~SSRSH~Ifti~v 259 (376)
T 2rep_A 242 TAQNERSSRSHSVFQLQI 259 (376)
T ss_dssp -----CGGGSEEEEEEEE
T ss_pred ccCCCCCCCceEEEEEEE
Confidence 65 999999999974
No 52
>3nwn_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.1e-40 Score=343.51 Aligned_cols=203 Identities=27% Similarity=0.394 Sum_probs=157.8
Q ss_pred ccccCCCchHHhhccceeeeecCCCceeEEeeecc--------cccccccccccccccccccceeehhhhhhhHHHHhcc
Q psy9448 354 INQKMPLNSVERAAKSCSIVDCSSSREITIKERVN--------DKISKTFGFDRVFSQESKQVDVYKYVVNPLIDEVLSG 425 (583)
Q Consensus 354 ~~qk~P~~~~E~a~~~~~iV~~~~~~~~~~~~~~~--------~~~~k~f~fD~vf~~~~~q~~vy~~~~~~~v~~~l~G 425 (583)
.-+.||+++.|... +....+.+.+.+..+.. ....+.|.||+||+ +++|++||+.++.|+|+.+|+|
T Consensus 29 ~vRvRP~~~~e~~~----~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~F~FD~Vf~-~~sQ~~Vy~~~~~plv~~~l~G 103 (359)
T 3nwn_A 29 FVRVKPTDDFAHEM----IRYGDDKRSIDIHLKKDIRRGVVNNQQTDWSFKLDGVLH-DASQDLVYETVAKDVVSQALDG 103 (359)
T ss_dssp EEEECCCSSCCTTT----EEECTTSSEEEEECCCCSSHHHHTTSCCEEEEECSEEEE-SCCHHHHHHHHTHHHHHHHHTT
T ss_pred EEEcCCCCcccccc----eeecCCCcEEEEecCCccccccccCCcCceEeecCccCC-CCCHHHHHHHHHHHHHHHHhCC
Confidence 34678887655421 22223455565554422 23346799999997 5899999999999999999999
Q ss_pred cceeEEEeeccCCCceEEeeccccCCCCcccccCCCCccchhhhhhhhHHhhccccceeEEEEeeeeechHhhhhccCCC
Q psy9448 426 YNCTVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHLFDELRLLGDAEFTVRVSFLEIYNEELIDLLSPT 505 (583)
Q Consensus 426 ~n~~i~ayGqtgsGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~lf~~~~~~~~~~~~v~~S~~eiy~e~i~DLL~~~ 505 (583)
||+||||||||||||||||+|+...+ ..+|||||++++||+.++...++.|.|++||+|||||+|+|||++.
T Consensus 104 ~N~tifAYGQTGSGKTyTM~G~~~~~--------~~~Giipra~~~lF~~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~ 175 (359)
T 3nwn_A 104 YNGTIMCYGQTGAGKTYTMMGATENY--------KHRGILPRALQQVFRMIEERPTHAITVRVSYLEIYNESLFDLLSTL 175 (359)
T ss_dssp CCEEEEEEESTTSSHHHHHTBCSSCG--------GGBCHHHHHHHHHHHHHHTCTTSCEEEEEEEEEEETTEEEETTSSS
T ss_pred CCEEEEEeCCCCCCccEEeCCccCCc--------cchhhHHHHHHHHHHHhhcCCCCcEEEEEEEEEEeccccccccccc
Confidence 99999999999999999999975432 2359999999999999998888899999999999999999999875
Q ss_pred ccccccccchhhHHHHHHHHHHHHHHHhhcceEEeecchHHHHHHHHhhhhceeccCCCCCcccCC----CCccceeeec
Q psy9448 506 DDITKLRHTSEYTEEIEKLRRDLQAAREKNGVFLAAENYDQMVNELYAEVTSVEKKSSSPSAAEDQ----PPTKHLILRA 581 (583)
Q Consensus 506 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~e~~~~l~~g~~~r~~~~~~----SSRsH~if~~ 581 (583)
....+... .+.+.+++. .+++.++.+..|.++++++.+|..|..+|+++.|. |||||+||+|
T Consensus 176 ~~~~~~~~-------------~~~~~~~~~-g~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i 241 (359)
T 3nwn_A 176 PYVGPSVT-------------PMTIVENPQ-GVFIKGLSVHLTSQEEDAFSLLFEGETNRIIASHTMNKNSSRSHCIFTI 241 (359)
T ss_dssp TTSCTTTS-------------CCEEEEETT-EEEEETCCCEECSSHHHHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEEE
T ss_pred cccccccc-------------cceEEecCC-ceEEeccEEEEecCHHHHHHHHHhhhhhcccccccCccccCcceEEEEE
Confidence 43221110 011122333 46689999999999999999999999999877655 9999999998
Q ss_pred cC
Q psy9448 582 RL 583 (583)
Q Consensus 582 ~~ 583 (583)
.+
T Consensus 242 ~i 243 (359)
T 3nwn_A 242 YL 243 (359)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 53
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-39 Score=344.21 Aligned_cols=206 Identities=26% Similarity=0.405 Sum_probs=149.9
Q ss_pred ccccCCCchH-HhhccceeeeecC----CCceeEEeeecccccccccccccccccccccceeehhhhhhhHHHHhcccce
Q psy9448 354 INQKMPLNSV-ERAAKSCSIVDCS----SSREITIKERVNDKISKTFGFDRVFSQESKQVDVYKYVVNPLIDEVLSGYNC 428 (583)
Q Consensus 354 ~~qk~P~~~~-E~a~~~~~iV~~~----~~~~~~~~~~~~~~~~k~f~fD~vf~~~~~q~~vy~~~~~~~v~~~l~G~n~ 428 (583)
.-+.||+... |........++.. ....+.+....+....+.|.||+||+++++|++||+. +.|+|+++++|||+
T Consensus 64 ~vRvRP~~~~~e~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~F~FD~VF~~~~~Q~~Vf~~-v~~lv~~~l~G~N~ 142 (403)
T 4etp_A 64 YLRIRPALKNLENSDTSLINVNEFDDNSGVQSMEVTKIQNTAQVHEFKFDKIFDQQDTNVDVFKE-VGQLVQSSLDGYNV 142 (403)
T ss_dssp EEEECCCCTTTSCSCCTTEEECCCBTTTTBEEEEEEECSSSCEEEEEEESEEECTTCCHHHHHHH-HHHHHHHHHTTCCE
T ss_pred EEEeCCCCCcccccCCCeeEEeeccCCCCceEEEEecCCCCcCceEEEcCEEECCCCchHHHHHH-HHHHHHHHhCCcce
Confidence 4467898766 3333333223211 1234455444444456889999999999999999998 56999999999999
Q ss_pred eEEEeeccCCCceEEeeccccCCCCcccccCCCCccchhhhhhhhHHhhc--cccceeEEEEeeeeechHhhhhccCCCc
Q psy9448 429 TVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHLFDELRL--LGDAEFTVRVSFLEIYNEELIDLLSPTD 506 (583)
Q Consensus 429 ~i~ayGqtgsGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~lf~~~~~--~~~~~~~v~~S~~eiy~e~i~DLL~~~~ 506 (583)
||||||||||||||||+|+. .|||||++++||..++. ..++.|.|++||+|||||+|+|||++..
T Consensus 143 tifAYGqTGSGKTyTM~g~~-------------~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~ 209 (403)
T 4etp_A 143 AIFAYGQTGSGKTFTMLNPG-------------DGIIPSTISHIFNWINKLKTKGWDYKVNAEFIEIYNENIVDLLRSDN 209 (403)
T ss_dssp EEEEESCTTSSHHHHHHCTT-------------TSHHHHHHHHHHHHHHHHHTTTEEEEEEEEEEEEETTEEEETTCC--
T ss_pred EEEEECCCCCCCceEeCCCC-------------CccchhHHHHHHHHHHhhhccCceEEEEEEEEEEecceeeEccCCcc
Confidence 99999999999999999842 39999999999999876 3457999999999999999999998764
Q ss_pred cccccccchhhHHHHHHHHHHHHHHHh-hcceEEeecchHHHHHHHHhhhhceeccCCCCCcccCC----CCccceeeec
Q psy9448 507 DITKLRHTSEYTEEIEKLRRDLQAARE-KNGVFLAAENYDQMVNELYAEVTSVEKKSSSPSAAEDQ----PPTKHLILRA 581 (583)
Q Consensus 507 ~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~e~~~~l~~g~~~r~~~~~~----SSRsH~if~~ 581 (583)
........ ...+.++++ ..+.+++.++.+..|.++++++.+|..|..+|+++.|. |||||+||+|
T Consensus 210 ~~~~~~~~----------~~~~~i~~~~~~~~~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i 279 (403)
T 4etp_A 210 NNKEDTSI----------GLKHEIRHDQETKTTTITNVTSVKLESEEMVEIILKKANKLRSTASTASNEHSSRSHSIFII 279 (403)
T ss_dssp ------CC----------SCCCCEEEETTTTEEEETTCCCEECCCHHHHHHHHHHHC--C----CHHHHHHHTSEEEEEE
T ss_pred cccccccc----------CcceeeEEeCCCCCEEecCcEEEEeCCHHHHHHHHHHHHHhcccccccCCcccCCcccEEEE
Confidence 21100000 000011122 34677899999999999999999999999999999888 9999999998
Q ss_pred cC
Q psy9448 582 RL 583 (583)
Q Consensus 582 ~~ 583 (583)
.+
T Consensus 280 ~v 281 (403)
T 4etp_A 280 HL 281 (403)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 54
>3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A*
Probab=100.00 E-value=6.4e-40 Score=339.31 Aligned_cols=192 Identities=24% Similarity=0.422 Sum_probs=138.5
Q ss_pred ccccCCCchHHhhccceeeeecCC---CceeEEeeecccccccccccccccccccccceeehhhhhhhHHHHhcccceeE
Q psy9448 354 INQKMPLNSVERAAKSCSIVDCSS---SREITIKERVNDKISKTFGFDRVFSQESKQVDVYKYVVNPLIDEVLSGYNCTV 430 (583)
Q Consensus 354 ~~qk~P~~~~E~a~~~~~iV~~~~---~~~~~~~~~~~~~~~k~f~fD~vf~~~~~q~~vy~~~~~~~v~~~l~G~n~~i 430 (583)
.-+.||++..|. .+...++.... ++.+.+ ..+.|.||+||+++++|++||+.++.|+|+.+|+|||+||
T Consensus 27 ~vRvRP~~~~e~-~~~~~~v~~~~~~~~~~~~~-------~~~~F~FD~Vf~~~~sQ~~Vy~~~~~plv~~~l~G~N~ti 98 (344)
T 3dc4_A 27 AVREAPYRQFLG-RREPSVVQFPPWSDGKSLIV-------DQNEFHFDHAFPATISQDEMYQALILPLVDKLLEGFQCTA 98 (344)
T ss_dssp EEEECCCC--------CCSEECCSSSCSSEEEE-------TTEEEECSEEECTTCCHHHHHHHHTHHHHHHHHHTCCEEE
T ss_pred EEECCCCCcccc-cCCceEEEecCCCCCceEEe-------cCcEEEcceEECCCCCHHHHHHhhccchhhHhhCCCceEE
Confidence 446799987763 33444555432 334333 2478999999999999999999999999999999999999
Q ss_pred EEeeccCCCceEEeeccccCCCCcccccCCCCccchhhhhhhhHHhhccc---cceeEEEEeeeeechHhhhhccCCCcc
Q psy9448 431 FAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHLFDELRLLG---DAEFTVRVSFLEIYNEELIDLLSPTDD 507 (583)
Q Consensus 431 ~ayGqtgsGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~lf~~~~~~~---~~~~~v~~S~~eiy~e~i~DLL~~~~~ 507 (583)
||||||||||||||+|...... .+...|||||++++||+.+.... ...|.|++||+|||||+|+|||++...
T Consensus 99 fAYGQTGSGKTyTM~g~~~~~~-----~~~~~GIipra~~~LF~~i~~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~ 173 (344)
T 3dc4_A 99 LAYGQTGTGKSYSMGMTPPGEI-----LPEHLGILPRALGDIFERVTARQENNKDAIQVYASFIEIYNEKPFDLLGSTPH 173 (344)
T ss_dssp EEESSTTSSHHHHHTCSCGGGS-----CGGGCCHHHHHHHHHHHHHHHSSSSCSSCCEEEEEEEEEESSCEEETTSSCTT
T ss_pred EEecCCCCCCCeEEcCCCCCCC-----CcccCCcHHHHHHHHHHHHHhhhhccccceEEEEEEEEEeCCeeEEccCCCCC
Confidence 9999999999999988643211 12346999999999999997543 346999999999999999999987654
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHhhcceEEeecchHHHHHHHHhhhhceeccCCCCCcccCC----CCccceeeeccC
Q psy9448 508 ITKLRHTSEYTEEIEKLRRDLQAAREKNGVFLAAENYDQMVNELYAEVTSVEKKSSSPSAAEDQ----PPTKHLILRARL 583 (583)
Q Consensus 508 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~e~~~~l~~g~~~r~~~~~~----SSRsH~if~~~~ 583 (583)
...+... ..++.+..|.+.++++.+|+.|..+|+++.|. |||||+||+|.+
T Consensus 174 ~~~~~~~-------------------------~~~~~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~Ifti~v 228 (344)
T 3dc4_A 174 MPMVAAR-------------------------CQRCTCLPLHSQADLHHILELGTRNRRVRPTNMNSNSSRSHAIVTIHV 228 (344)
T ss_dssp SBCCSST-------------------------TTCSCCEECSSHHHHHHHHHHHHHTCC----------CCEEEEEEEEE
T ss_pred Ccccccc-------------------------ccCceecccCCHHHHHHHHHHHHhhcccccccCCCCCCCceEEEEEEE
Confidence 3222110 11334444567778888888888888877766 999999999864
No 55
>2nr8_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural genomics consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens} PDB: 3nwn_A*
Probab=100.00 E-value=2.1e-39 Score=337.14 Aligned_cols=200 Identities=27% Similarity=0.413 Sum_probs=155.2
Q ss_pred ccCCCchHHhhccceeeeec-CCCceeEEeeecc--------cccccccccccccccccccceeehhhhhhhHHHHhccc
Q psy9448 356 QKMPLNSVERAAKSCSIVDC-SSSREITIKERVN--------DKISKTFGFDRVFSQESKQVDVYKYVVNPLIDEVLSGY 426 (583)
Q Consensus 356 qk~P~~~~E~a~~~~~iV~~-~~~~~~~~~~~~~--------~~~~k~f~fD~vf~~~~~q~~vy~~~~~~~v~~~l~G~ 426 (583)
+-||+.+.+. .++.+ .+++++.+..+.. ....+.|.||+||+ +++|++||+.++.|+|+.+++||
T Consensus 30 RvRP~~~~~~-----~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~F~fD~Vf~-~~sQ~~Vy~~~~~~lv~~~l~G~ 103 (358)
T 2nr8_A 30 RVKPTDDFAH-----EMIRYGDDKRSIDIHLKKDIRRGVVNNQQTDWSFKLDGVLH-DASQDLVYETVAKDVVSQALDGY 103 (358)
T ss_dssp EECCCSSCCT-----TTEEECTTSSEEEEECCCCSSHHHHTTSCCEEEEECSEEEE-SCCHHHHHHHHTHHHHHHHHTTC
T ss_pred EcCCCCCCcc-----ceeEECCCCCEEEEecCCccccccccCCCcceEEECCeecC-CcCHHHHHHHHHHHHHHHHhCCC
Confidence 5577754322 12222 3455665554322 22346799999995 79999999999999999999999
Q ss_pred ceeEEEeeccCCCceEEeeccccCCCCcccccCCCCccchhhhhhhhHHhhccccceeEEEEeeeeechHhhhhccCCCc
Q psy9448 427 NCTVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMNHLFDELRLLGDAEFTVRVSFLEIYNEELIDLLSPTD 506 (583)
Q Consensus 427 n~~i~ayGqtgsGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~~lf~~~~~~~~~~~~v~~S~~eiy~e~i~DLL~~~~ 506 (583)
|+||||||||||||||||+|..... ...|||||++++||+.++...+..|.|++||+|||||+|+|||++.+
T Consensus 104 N~tIfAYGqTGSGKTyTM~G~~~~~--------~~~Giipra~~~lF~~i~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~ 175 (358)
T 2nr8_A 104 NGTIMCYGQTGAGKTYTMMGATENY--------KHRGILPRALQQVFRMIEERPTHAITVRVSYLEIYNESLFDLLSTLP 175 (358)
T ss_dssp CEEEEEEESTTSSHHHHHTBCSSCG--------GGBCHHHHHHHHHHHHHHTCTTSCEEEEEEEEEEETTEEEETTSSST
T ss_pred ceEEEEECCCCCCCceEeccccccc--------ccCCcHHHHHHHHHHHHhhcCCceEEEEEEEEEEeCCeeeECcCCcc
Confidence 9999999999999999999975432 23599999999999999988888999999999999999999998743
Q ss_pred cccccccchhhHHHHHHHHHHHHHHHhhcceEEeecchHHHHHHHHhhhhceeccCCCCCcccCC----CCccceeeecc
Q psy9448 507 DITKLRHTSEYTEEIEKLRRDLQAAREKNGVFLAAENYDQMVNELYAEVTSVEKKSSSPSAAEDQ----PPTKHLILRAR 582 (583)
Q Consensus 507 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~e~~~~l~~g~~~r~~~~~~----SSRsH~if~~~ 582 (583)
....- ..++.+.+++ ..+++.++.+..|.+.++++.+|++|..+|+++.|. |||||+||+|.
T Consensus 176 ~~~~~-------------~~~l~i~e~~-~g~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~ 241 (358)
T 2nr8_A 176 YVGPS-------------VTPMTIVENP-QGVFIKGLSVHLTSQEEDAFSLLFEGETNRIIASHTMNKNSSRSHCIFTIY 241 (358)
T ss_dssp TSCTT-------------TSCCEEEEET-TEEEEETCCCEECSSHHHHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEEEE
T ss_pred ccCcc-------------CCceEEEECC-CceEecCCEEEEcCCHHHHHHHHHHHHhccccccccCCCCCCcCeEEEEEE
Confidence 21000 0011223344 346789999999999999999999999999877665 99999999986
Q ss_pred C
Q psy9448 583 L 583 (583)
Q Consensus 583 ~ 583 (583)
+
T Consensus 242 v 242 (358)
T 2nr8_A 242 L 242 (358)
T ss_dssp E
T ss_pred E
Confidence 4
No 56
>4h1g_A Maltose binding protein-cakar3 motor domain fusio; kinesin motor domain, motor protein, chimera; HET: MTT ADP EDO; 2.15A {Escherichia coli}
Probab=100.00 E-value=8.8e-37 Score=348.13 Aligned_cols=176 Identities=31% Similarity=0.521 Sum_probs=141.4
Q ss_pred CCCceeEEeeec-ccccccccccccccccccccceeehhhhhhhHHHHhcccceeEEEeeccCCCceEEeeccccCCCCc
Q psy9448 376 SSSREITIKERV-NDKISKTFGFDRVFSQESKQVDVYKYVVNPLIDEVLSGYNCTVFAYGQTGTGKTFTMEGEKSNDPSI 454 (583)
Q Consensus 376 ~~~~~~~~~~~~-~~~~~k~f~fD~vf~~~~~q~~vy~~~~~~~v~~~l~G~n~~i~ayGqtgsGKT~Tm~G~~~~~~~~ 454 (583)
...+++++.++. +....++|+||+||+++++|++||+. +.|+|+.+|+|||+||||||||||||||||+|+.
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~f~fd~vf~~~~~q~~v~~~-~~~~v~~~~~G~n~~i~ayGqtgsGKT~Tm~g~~------ 484 (715)
T 4h1g_A 412 ESKQELVITRNINNNFSNLRFLFDKIFEREQSNDLVFEE-LSQLIQCSLDGTNVCVFAYGQTGSGKTFTMSHPT------ 484 (715)
T ss_dssp ---CEEEEEEEETTEEEEEEEECSEEECSSCCHHHHGGG-THHHHHHHHTTCCEEEEEESSTTSSHHHHHHCTT------
T ss_pred CCCCeEEEcCCCCCCCCCeEEEeceEeCCCCCHHHHHHH-HHHHHHHHhCCceEEEEccCCCCCchhhccCCCC------
Confidence 345666666544 44567899999999999999999987 5799999999999999999999999999999842
Q ss_pred ccccCCCCccchhhhhhhhHHhhcc--ccceeEEEEeeeeechHhhhhccCCCccc---cccccchhhHHHHHHHHHHHH
Q psy9448 455 SWQDDPLSGIVPRAMNHLFDELRLL--GDAEFTVRVSFLEIYNEELIDLLSPTDDI---TKLRHTSEYTEEIEKLRRDLQ 529 (583)
Q Consensus 455 ~~~~~~~~Giipr~~~~lf~~~~~~--~~~~~~v~~S~~eiy~e~i~DLL~~~~~~---~~~~~~~~~~~~i~~~~~~~~ 529 (583)
.|||||++++||+.++.. .+..|.|++||+|||||+|+|||+|.... ..+++
T Consensus 485 -------~Giipr~~~~lf~~~~~~~~~~~~~~v~~s~~Eiyne~i~DLl~~~~~~~~~~~~~~---------------- 541 (715)
T 4h1g_A 485 -------NGMIPLSLKKIFNDIEELKEKGWSYTVRGKFIEIYNEAIVDLLNPKIDPNTKYEIKH---------------- 541 (715)
T ss_dssp -------TSHHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEEETTEEEESSSCCCCTTCCCCEEE----------------
T ss_pred -------CCcHHHHHHHHHHHHHHhhcCCceEEEEEEEEEEECCEEEECCCCCCCCCCcceeEE----------------
Confidence 399999999999998753 45689999999999999999999876432 22332
Q ss_pred HHHhhcceEEeecchHHHHHHHHhhhhceeccCCCCCcccCC----CCccceeeeccC
Q psy9448 530 AAREKNGVFLAAENYDQMVNELYAEVTSVEKKSSSPSAAEDQ----PPTKHLILRARL 583 (583)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~v~~~~e~~~~l~~g~~~r~~~~~~----SSRsH~if~~~~ 583 (583)
.+..+.+++.++.+..|.+.++++.+|.+|..+|+++.|. |||||+||+|+|
T Consensus 542 --~~~~g~~~v~~l~~~~v~~~~~~~~~~~~g~~~r~~~~t~~n~~ssRSH~i~~i~~ 597 (715)
T 4h1g_A 542 --DDIAGKTTVTNVSTIDIKSPEQAITILNQANKKRSTAATKSNDHSSRSHSIFIIDL 597 (715)
T ss_dssp --ETTTTEEEETTCCCEECSCHHHHHHHHHHHHCC----------CGGGSEEEEEEEE
T ss_pred --ecCCCCEEEeCCEEEEcCCHHHHHHHHHHHHhccCcccccccCccccccEEEEEEE
Confidence 2345667889999999999999999999999999888776 999999999974
No 57
>2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9
Probab=99.97 E-value=4e-32 Score=228.52 Aligned_cols=99 Identities=43% Similarity=0.630 Sum_probs=94.4
Q ss_pred hcCcchhhhhhhhHHHHHhhh-CCCCCcchhhHhHHhhhhcCCcceeeEEEEeCccccchhhhhhhhhhhhhhccCCCch
Q psy9448 235 AGNINQSLLTLGRCITALVEK-TPHIPYRESKLTRLLQDSLGGRTKTSIIATVSPAQLNMEETLSTLDYAHRAKNITNRP 313 (583)
Q Consensus 235 ~~~In~SL~~L~~vi~aL~~~-~~~ipyR~SkLT~lL~d~Lggn~~t~~I~~vsp~~~~~~eTl~TL~fa~r~k~i~n~~ 313 (583)
+.+||+||++||+||.+|+++ ..||||||||||+||||+||||++|+||+||||+..+++||++||+||+|||+|+|.|
T Consensus 1 a~~IN~SL~~Lg~vI~aL~~~~~~hvPyRdSkLT~lL~dsLgGnskt~mi~~vsp~~~~~~ETl~TL~fA~rak~i~~~~ 80 (100)
T 2kin_B 1 AKNINKSLSALGNVISALAEGTKTHVPYRDSKMTRILQDSLDGNCRTTIVICCSPSVFNEAETKSTLMFGQRAKTIKNTV 80 (100)
T ss_dssp CCBSSHHHHHHHHHHHHHHHTCCSSCCGGGCHHHHHTHHHHHSSEEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCcchHHHHHHHHHHHHHHhcCCCCCCCccchHHHHHHHHhcCCCceeEEEEeCcccchHHHHHHHHHHHHHHHhccCcc
Confidence 368999999999999999987 6899999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhHHHHHHHHHHHHH
Q psy9448 314 EINQKMSKKALLRVTSINME 333 (583)
Q Consensus 314 ~~n~~~~~~~~~~~~~~e~~ 333 (583)
.+|++++.+.++++|++|++
T Consensus 81 ~~n~~~~~~~l~~~~~~e~~ 100 (100)
T 2kin_B 81 SVNLELTAEEWKKKYEKEKE 100 (100)
T ss_dssp CCEEECCHHHHHHHHHHHHC
T ss_pred eeccCCCHHHHHHHHHHhhC
Confidence 99999999999999988763
No 58
>3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9
Probab=99.95 E-value=8.4e-29 Score=215.75 Aligned_cols=96 Identities=44% Similarity=0.653 Sum_probs=91.5
Q ss_pred chhhhhhhhHHHHHhhhC-CCCCcchhhHhHHhhhhcCCcceeeEEEEeCccccchhhhhhhhhhhhhhccCCCchhhhh
Q psy9448 239 NQSLLTLGRCITALVEKT-PHIPYRESKLTRLLQDSLGGRTKTSIIATVSPAQLNMEETLSTLDYAHRAKNITNRPEINQ 317 (583)
Q Consensus 239 n~SL~~L~~vi~aL~~~~-~~ipyR~SkLT~lL~d~Lggn~~t~~I~~vsp~~~~~~eTl~TL~fa~r~k~i~n~~~~n~ 317 (583)
|+||++||+||.+|+++. .||||||||||+||||+||||++|+||+||||+..+++||++||+||+|||+|+|.|.+|.
T Consensus 1 N~SL~~Lg~vi~aL~~~~~~hvPyRdSkLT~lL~dsLggn~~t~~i~~isp~~~~~~eTl~TL~fa~rak~i~n~~~~n~ 80 (117)
T 3kin_B 1 NKSLSALGNVISALAEGTKTHVPYRDSKMTRILQDSLGGNCRTTIVICCSPSVFNEAETKSTLMFGQRAKTIKNTVSVNL 80 (117)
T ss_dssp CCHHHHHHHHHHHHHHSCCSSCCGGGSHHHHHTHHHHHSSSEEEEEEEECCSGGGHHHHHHHHHHHHHHTTCEEEECCCB
T ss_pred CCCHHHHHHHHHHHHhCCCCCCCCcchHHHHHHHHHcCCCccceeeeeeCCCcccHHHHHHHHHHHHHhCcccCCceecC
Confidence 899999999999999874 6999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHH
Q psy9448 318 KMSKKALLRVTSINMEE 334 (583)
Q Consensus 318 ~~~~~~~~~~~~~e~~~ 334 (583)
+++.+.+++.+++++++
T Consensus 81 ~~~~~~l~~~~~~e~~~ 97 (117)
T 3kin_B 81 ELTAEEWKKKYEKEKEK 97 (117)
T ss_dssp CCCHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHH
Confidence 99998888888887765
No 59
>2o0a_A S.cerevisiae chromosome XVI reading frame ORF YPL253C; VIK1, motor homology domain, kinesin, motor domain, microtubule-binding; 1.60A {Saccharomyces cerevisiae}
Probab=99.82 E-value=1.9e-21 Score=190.31 Aligned_cols=230 Identities=12% Similarity=0.101 Sum_probs=156.5
Q ss_pred eeeeehhhcccCCceE--EEeehhhhhhHHHHhc-ccceeEEEeeccCCCceEEeecccCCCCCCCcccCCCCccchhhh
Q psy9448 14 VVSVMFLVCIFYTTIV--DVYKYVVNPLIDEVLS-GYNCTVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAM 90 (583)
Q Consensus 14 ~~~~~D~Vf~~~~tq~--~vy~~~~~plv~~~l~-G~n~~i~ayGqtgSGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~ 90 (583)
..+.||+||++.++|+ +||++ +.++|+.+++ |||+||||||||||||| ||++
T Consensus 57 k~f~FDRVf~p~s~Qe~~~vf~E-~~~~i~scLd~GyNvcIfSyGQTGsGKT------------------------~ral 111 (298)
T 2o0a_A 57 HVYKFNRVIPHLKVSEDKFFTQE-YSVYHDMCLNQKKNFNLISLSTTPHGSL------------------------RESL 111 (298)
T ss_dssp CEEECSEEEETTTSCHHHHHHHT-THHHHHHHHHTTCCEEEEEECSSCCHHH------------------------HHHH
T ss_pred ceEEeeeEECccccccHHHHHHH-HHHHHHHHHhCCCceEEEEECCCCCCcc------------------------HHHH
Confidence 4678999999999999 99999 5999999999 99999999999999998 7899
Q ss_pred hHHHHHHhh-ccceeEEEEEeehhhc-hHHhhhhcCCCCccceEEeeeccccccceEEeccceeeecc-hhHHHHHHHhc
Q psy9448 91 NHLFDELRL-LGDAEFTVRVSFLEIY-NEELIDLLSPTDDITKLRLFEDSARKGSVIIQGLEEKAVHN-KDEVYKILEKG 167 (583)
Q Consensus 91 ~~lf~~~~~-~~~~~~~v~vS~~EIy-ne~v~DLL~~~~~~~~l~i~~~~~~~~~~~v~~l~~~~v~s-~~e~~~ll~~g 167 (583)
..+|...+. .. ++|.+.+||+||| ||.++|||...+......+..+. .+..++.|++.+.|.+ .+|+..++..+
T Consensus 112 ~q~f~~~~~~~~-~~Y~~tlq~veLy~Ne~~~DLL~~~~~~~k~eIk~~~--~g~~iv~~s~~i~V~~~~edv~~~~~~~ 188 (298)
T 2o0a_A 112 IKFLAEKDTIYQ-KQYVITLQFVFLSDDEFSQDMLLDYSHNDKDSIKLKF--EKHSISLDSKLVIIENGLEDLPLNFSCD 188 (298)
T ss_dssp HHHHHSTTSHHH-HHEEEEEEEEEEECC-CEEETTSCCC------CEEEE--CSSCEEEESCCEEESSGGGGSCTTTTCC
T ss_pred HHHHHHhhhhcc-cceEEEEEEEEEecCCchHHhcCCCCCCCcceEEecC--CCCEEecccEEEEccccHHHHHHHhhcc
Confidence 999988755 34 8999999999999 99999999744433355665543 6788999999999999 99998887433
Q ss_pred chhhhhHHHHhhhcccCceeEEEEEEEeecCCCChhhHhhccCceeeeccCCcccCccchhhhhhhhhcCcchhhhhhhh
Q psy9448 168 SQKRQTAATLMNAHSSRSHTIFTITIHIKDNSLDGEELLRTGKLNLVDLAGSENIGRSGAQDKRAREAGNINQSLLTLGR 247 (583)
Q Consensus 168 ~~~R~~~~t~~n~~SSRSH~i~~i~i~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~~~~~~~~~~E~~~In~SL~~L~~ 247 (583)
...+ .+. +.-.|+.+.+..++...++.+....--++|+.+.-.+ ++..|.+
T Consensus 189 ~~~~------~~~---~gi~i~k~~~~~~~~~~~~~~~~~~~d~yf~e~~~~~--------------------~~~~l~~ 239 (298)
T 2o0a_A 189 EHPN------LPH---SGMGIIKVQFFPRDSKSDGNNDPVPVDFYFIELNNLK--------------------SIEQFDK 239 (298)
T ss_dssp ----------------CEEEEEEEEEEESCC-------CCCEEEEEEEECSHH--------------------HHHHHHH
T ss_pred cccc------cCC---CCceEEEEEEecCcccccccCCCCceEEEEEEeCCHH--------------------HHHHHHh
Confidence 2221 111 3456777777764433333322122346777664221 2333433
Q ss_pred HHHHHhhhCCCCCcchhhHhHHhhhhcCCcceeeEEEEeCccccchhhhhhhhhhhhhhccCCCc
Q psy9448 248 CITALVEKTPHIPYRESKLTRLLQDSLGGRTKTSIIATVSPAQLNMEETLSTLDYAHRAKNITNR 312 (583)
Q Consensus 248 vi~aL~~~~~~ipyR~SkLT~lL~d~Lggn~~t~~I~~vsp~~~~~~eTl~TL~fa~r~k~i~n~ 312 (583)
.+. .+ -+-.|+++-+|+..|- ..+.+++.++.-.... -.-|..++++.+++|.
T Consensus 240 ~~~---~~----~~~~spi~~il~~ll~-~tks~~~~~l~~~~~~----~~lL~~s~~i~~~~~~ 292 (298)
T 2o0a_A 240 SIF---KK----ESCETPIALVLKKLIS-DTKSFFLLNLNDSKNV----NKLLTISEEVQTQLCK 292 (298)
T ss_dssp HHH---TC-----CCCSHHHHHHHHHHH-HSBCEEEEEECCGGGH----HHHHHHHHHHHHHTC-
T ss_pred hcc---cc----cccCCcHHHHHHHHHh-cCcceEEEEecCCCch----hHHHHHHHHhhcccCc
Confidence 221 11 3556888989987765 4688999999865332 2256777777666654
No 60
>2o0a_A S.cerevisiae chromosome XVI reading frame ORF YPL253C; VIK1, motor homology domain, kinesin, motor domain, microtubule-binding; 1.60A {Saccharomyces cerevisiae}
Probab=99.74 E-value=7.2e-20 Score=179.26 Aligned_cols=123 Identities=11% Similarity=0.102 Sum_probs=101.1
Q ss_pred cccccccccccccccc--eeehhhhhhhHHHHhc-ccceeEEEeeccCCCceEEeeccccCCCCcccccCCCCccchhhh
Q psy9448 393 KTFGFDRVFSQESKQV--DVYKYVVNPLIDEVLS-GYNCTVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAM 469 (583)
Q Consensus 393 k~f~fD~vf~~~~~q~--~vy~~~~~~~v~~~l~-G~n~~i~ayGqtgsGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~ 469 (583)
+.|.||+||++.+.|+ +||++ +.++++.||+ |||+||||||||||||| ||++
T Consensus 57 k~f~FDRVf~p~s~Qe~~~vf~E-~~~~i~scLd~GyNvcIfSyGQTGsGKT------------------------~ral 111 (298)
T 2o0a_A 57 HVYKFNRVIPHLKVSEDKFFTQE-YSVYHDMCLNQKKNFNLISLSTTPHGSL------------------------RESL 111 (298)
T ss_dssp CEEECSEEEETTTSCHHHHHHHT-THHHHHHHHHTTCCEEEEEECSSCCHHH------------------------HHHH
T ss_pred ceEEeeeEECccccccHHHHHHH-HHHHHHHHHhCCCceEEEEECCCCCCcc------------------------HHHH
Confidence 7899999999999999 99999 5999999999 99999999999999999 8999
Q ss_pred hhhhHHhhc-cccceeEEEEeeeeec-hHhhhhccCCCccccccccchhhHHHHHHHHHHHHHHHhhcceEEeecchHHH
Q psy9448 470 NHLFDELRL-LGDAEFTVRVSFLEIY-NEELIDLLSPTDDITKLRHTSEYTEEIEKLRRDLQAAREKNGVFLAAENYDQM 547 (583)
Q Consensus 470 ~~lf~~~~~-~~~~~~~v~~S~~eiy-~e~i~DLL~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (583)
..+|...+. .. +.|.+.+||+||| ||.++|||...... . .+.+..+..+..++.+.....
T Consensus 112 ~q~f~~~~~~~~-~~Y~~tlq~veLy~Ne~~~DLL~~~~~~----------------~-k~eIk~~~~g~~iv~~s~~i~ 173 (298)
T 2o0a_A 112 IKFLAEKDTIYQ-KQYVITLQFVFLSDDEFSQDMLLDYSHN----------------D-KDSIKLKFEKHSISLDSKLVI 173 (298)
T ss_dssp HHHHHSTTSHHH-HHEEEEEEEEEEECC-CEEETTSCCC-----------------------CEEEECSSCEEEESCCEE
T ss_pred HHHHHHhhhhcc-cceEEEEEEEEEecCCchHHhcCCCCCC----------------C-cceEEecCCCCEEecccEEEE
Confidence 999987654 33 8999999999999 99999999733321 0 233445567777888888888
Q ss_pred HHH-HHhhhhce
Q psy9448 548 VNE-LYAEVTSV 558 (583)
Q Consensus 548 v~~-~~e~~~~l 558 (583)
|.+ ++++..++
T Consensus 174 V~~~~edv~~~~ 185 (298)
T 2o0a_A 174 IENGLEDLPLNF 185 (298)
T ss_dssp ESSGGGGSCTTT
T ss_pred ccccHHHHHHHh
Confidence 888 77766665
No 61
>3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A*
Probab=90.80 E-value=0.036 Score=50.84 Aligned_cols=52 Identities=13% Similarity=0.099 Sum_probs=34.8
Q ss_pred cccccccccccccccceeehhhhhhhHHHHhcccceeEEEeeccCCCceEEee
Q psy9448 393 KTFGFDRVFSQESKQVDVYKYVVNPLIDEVLSGYNCTVFAYGQTGTGKTFTME 445 (583)
Q Consensus 393 k~f~fD~vf~~~~~q~~vy~~~~~~~v~~~l~G~n~~i~ayGqtgsGKT~Tm~ 445 (583)
+..+||.....+..|.++++.+ ..+++++--.....++-||++|+|||+.+.
T Consensus 5 ~~~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~l~G~~G~GKTtL~~ 56 (180)
T 3ec2_A 5 WNANLDTYHPKNVSQNRALLTI-RVFVHNFNPEEGKGLTFVGSPGVGKTHLAV 56 (180)
T ss_dssp TTCCSSSCCCCSHHHHHHHHHH-HHHHHSCCGGGCCEEEECCSSSSSHHHHHH
T ss_pred hhCccccccCCCHHHHHHHHHH-HHHHHhccccCCCEEEEECCCCCCHHHHHH
Confidence 3467887666556677777654 445554333334567889999999997763
No 62
>3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A*
Probab=87.34 E-value=0.039 Score=50.60 Aligned_cols=48 Identities=10% Similarity=-0.018 Sum_probs=29.3
Q ss_pred ehhhcccCCceEEEeehhhhhhHHHHhcccceeEEEeeccCCCceEEee
Q psy9448 18 MFLVCIFYTTIVDVYKYVVNPLIDEVLSGYNCTVFAYGQTGTGKTFTME 66 (583)
Q Consensus 18 ~D~Vf~~~~tq~~vy~~~~~plv~~~l~G~n~~i~ayGqtgSGKT~Tm~ 66 (583)
||.....+..|+++++.+ ..+++++-..-...++-||++|+|||+.+.
T Consensus 9 f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~l~G~~G~GKTtL~~ 56 (180)
T 3ec2_A 9 LDTYHPKNVSQNRALLTI-RVFVHNFNPEEGKGLTFVGSPGVGKTHLAV 56 (180)
T ss_dssp SSSCCCCSHHHHHHHHHH-HHHHHSCCGGGCCEEEECCSSSSSHHHHHH
T ss_pred cccccCCCHHHHHHHHHH-HHHHHhccccCCCEEEEECCCCCCHHHHHH
Confidence 444333334556665443 445554433334567889999999998873
No 63
>2w58_A DNAI, primosome component (helicase loader); ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.50A {Geobacillus kaustophilus HTA426}
Probab=85.27 E-value=0.22 Score=46.21 Aligned_cols=51 Identities=16% Similarity=0.322 Sum_probs=30.9
Q ss_pred ccccccccccccccceeehhhhhhhHHHHhccc-ceeEEEeeccCCCceEEee
Q psy9448 394 TFGFDRVFSQESKQVDVYKYVVNPLIDEVLSGY-NCTVFAYGQTGTGKTFTME 445 (583)
Q Consensus 394 ~f~fD~vf~~~~~q~~vy~~~~~~~v~~~l~G~-n~~i~ayGqtgsGKT~Tm~ 445 (583)
.++||........+.++++.+ ...+...-.+. +..++-||++|+|||+.+.
T Consensus 21 ~~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~G~~GtGKT~la~ 72 (202)
T 2w58_A 21 RASLSDVDLNDDGRIKAIRFA-ERFVAEYEPGKKMKGLYLHGSFGVGKTYLLA 72 (202)
T ss_dssp CCCTTSSCCSSHHHHHHHHHH-HHHHHHCCSSCCCCEEEEECSTTSSHHHHHH
T ss_pred cCCHhhccCCChhHHHHHHHH-HHHHHHhhhccCCCeEEEECCCCCCHHHHHH
Confidence 456776655544555555542 33333322222 2678999999999998764
No 64
>2qgz_A Helicase loader, putative primosome component; structural genomics, PSI-2, protein structure initiative; 2.40A {Streptococcus pyogenes serotype M3}
Probab=82.66 E-value=0.34 Score=48.75 Aligned_cols=51 Identities=12% Similarity=0.382 Sum_probs=29.4
Q ss_pred cccccccccccccceeehhhhhhhHHHHhcccceeEEEeeccCCCceEEeec
Q psy9448 395 FGFDRVFSQESKQVDVYKYVVNPLIDEVLSGYNCTVFAYGQTGTGKTFTMEG 446 (583)
Q Consensus 395 f~fD~vf~~~~~q~~vy~~~~~~~v~~~l~G~n~~i~ayGqtgsGKT~Tm~G 446 (583)
.+||........+..++.. +...++..-.+....++-||++|+||||.+..
T Consensus 121 ~tfd~f~~~~~~~~~~~~~-~~~~i~~~~~~~~~~lll~G~~GtGKT~La~a 171 (308)
T 2qgz_A 121 IHLSDIDVNNASRMEAFSA-ILDFVEQYPSAEQKGLYLYGDMGIGKSYLLAA 171 (308)
T ss_dssp CCGGGSCCCSHHHHHHHHH-HHHHHHHCSCSSCCEEEEECSTTSSHHHHHHH
T ss_pred CCHhhCcCCChHHHHHHHH-HHHHHHhccccCCceEEEECCCCCCHHHHHHH
Confidence 5666544333344434442 23344333223356789999999999998754
No 65
>1jbk_A CLPB protein; beta barrel, chaperone; 1.80A {Escherichia coli} SCOP: c.37.1.20
Probab=80.66 E-value=0.58 Score=42.08 Aligned_cols=31 Identities=19% Similarity=0.231 Sum_probs=24.1
Q ss_pred hhhhhHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 35 VVNPLIDEVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 35 ~~~plv~~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
.++.+++.+..+....++-||++|+|||+.+
T Consensus 30 ~~~~l~~~l~~~~~~~~ll~G~~G~GKT~l~ 60 (195)
T 1jbk_A 30 EIRRTIQVLQRRTKNNPVLIGEPGVGKTAIV 60 (195)
T ss_dssp HHHHHHHHHTSSSSCEEEEECCTTSCHHHHH
T ss_pred HHHHHHHHHhcCCCCceEEECCCCCCHHHHH
Confidence 3555666665666678899999999999877
No 66
>2qgz_A Helicase loader, putative primosome component; structural genomics, PSI-2, protein structure initiative; 2.40A {Streptococcus pyogenes serotype M3}
Probab=80.51 E-value=0.18 Score=50.84 Aligned_cols=19 Identities=26% Similarity=0.721 Sum_probs=16.7
Q ss_pred ceeEEEeeccCCCceEEee
Q psy9448 48 NCTVFAYGQTGTGKTFTME 66 (583)
Q Consensus 48 n~~i~ayGqtgSGKT~Tm~ 66 (583)
...|+-||++|+||||.+.
T Consensus 152 ~~~lll~G~~GtGKT~La~ 170 (308)
T 2qgz_A 152 QKGLYLYGDMGIGKSYLLA 170 (308)
T ss_dssp CCEEEEECSTTSSHHHHHH
T ss_pred CceEEEECCCCCCHHHHHH
Confidence 5678899999999999884
No 67
>2w58_A DNAI, primosome component (helicase loader); ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.50A {Geobacillus kaustophilus HTA426}
Probab=79.27 E-value=0.23 Score=46.07 Aligned_cols=18 Identities=28% Similarity=0.551 Sum_probs=15.8
Q ss_pred eeEEEeeccCCCceEEee
Q psy9448 49 CTVFAYGQTGTGKTFTME 66 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm~ 66 (583)
..|+-||++|+|||+.+.
T Consensus 55 ~~~~l~G~~GtGKT~la~ 72 (202)
T 2w58_A 55 KGLYLHGSFGVGKTYLLA 72 (202)
T ss_dssp CEEEEECSTTSSHHHHHH
T ss_pred CeEEEECCCCCCHHHHHH
Confidence 678899999999999773
No 68
>3te6_A Regulatory protein SIR3; heterochromatin, gene silencing, SIR complex, HMR, HML, TELO AAA+ domain, structural, nucleus, gene RE; 2.80A {Saccharomyces cerevisiae}
Probab=78.88 E-value=0.35 Score=48.95 Aligned_cols=23 Identities=13% Similarity=0.105 Sum_probs=19.7
Q ss_pred HhcccceeEEEeeccCCCceEEe
Q psy9448 43 VLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 43 ~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
+-.|...+++-||++|+|||.++
T Consensus 40 i~~~~~~~lli~GpPGTGKT~~v 62 (318)
T 3te6_A 40 LMSSQNKLFYITNADDSTKFQLV 62 (318)
T ss_dssp HHTTCCCEEEEECCCSHHHHHHH
T ss_pred hcCCCCCeEEEECCCCCCHHHHH
Confidence 33678889999999999999776
No 69
>2p65_A Hypothetical protein PF08_0063; CLPB, malaria, structural genomics, structural genomics consortium, SGC, unknown function; 1.70A {Plasmodium falciparum}
Probab=78.64 E-value=0.65 Score=41.67 Aligned_cols=31 Identities=19% Similarity=0.227 Sum_probs=23.9
Q ss_pred hhhhhHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 35 VVNPLIDEVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 35 ~~~plv~~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
.+..+++.+..+....++-||++|+|||+.+
T Consensus 30 ~~~~l~~~l~~~~~~~vll~G~~G~GKT~la 60 (187)
T 2p65_A 30 EIRRAIQILSRRTKNNPILLGDPGVGKTAIV 60 (187)
T ss_dssp HHHHHHHHHTSSSSCEEEEESCGGGCHHHHH
T ss_pred HHHHHHHHHhCCCCCceEEECCCCCCHHHHH
Confidence 3455666555666778899999999999876
No 70
>4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=76.81 E-value=6.3 Score=41.35 Aligned_cols=76 Identities=24% Similarity=0.364 Sum_probs=46.0
Q ss_pred cccccccccccccceeehhhhhhhHH-HHhccc----ceeEEEeeccCCCceEEe--------------eccccCCCCcc
Q psy9448 395 FGFDRVFSQESKQVDVYKYVVNPLID-EVLSGY----NCTVFAYGQTGTGKTFTM--------------EGEKSNDPSIS 455 (583)
Q Consensus 395 f~fD~vf~~~~~q~~vy~~~~~~~v~-~~l~G~----n~~i~ayGqtgsGKT~Tm--------------~G~~~~~~~~~ 455 (583)
-+||-|-+-+.--+++.+.+..|+.. ..+..+ .-.|+-||+.|+|||... -|+.-
T Consensus 169 v~~~digGl~~~k~~l~e~v~~pl~~p~~~~~~g~~~prGiLL~GPPGtGKT~lakAiA~~~~~~~~~v~~~~l------ 242 (428)
T 4b4t_K 169 VTYADVGGLDMQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTKAAFIRVNGSEF------ 242 (428)
T ss_dssp CCGGGSCSCHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCEEEEESCTTTTHHHHHHHHHHHHTCEEEEEEGGGT------
T ss_pred CCHHHhccHHHHHHHHHHHHHHHHhCHHHHHhCCCCCCceEEEECCCCCCHHHHHHHHHHHhCCCeEEEecchh------
Confidence 45666666655444555555555543 234322 245999999999998543 22211
Q ss_pred cccCCCCccchhhhhhhhHHhhc
Q psy9448 456 WQDDPLSGIVPRAMNHLFDELRL 478 (583)
Q Consensus 456 ~~~~~~~Giipr~~~~lf~~~~~ 478 (583)
-....|--++.++++|.....
T Consensus 243 --~~~~~Ge~e~~ir~lF~~A~~ 263 (428)
T 4b4t_K 243 --VHKYLGEGPRMVRDVFRLARE 263 (428)
T ss_dssp --CCSSCSHHHHHHHHHHHHHHH
T ss_pred --hccccchhHHHHHHHHHHHHH
Confidence 122347788999999987654
No 71
>1jbk_A CLPB protein; beta barrel, chaperone; 1.80A {Escherichia coli} SCOP: c.37.1.20
Probab=73.98 E-value=1.3 Score=39.71 Aligned_cols=31 Identities=23% Similarity=0.290 Sum_probs=22.7
Q ss_pred hhhhHHHHhcccceeEEEeeccCCCceEEee
Q psy9448 415 VNPLIDEVLSGYNCTVFAYGQTGTGKTFTME 445 (583)
Q Consensus 415 ~~~~v~~~l~G~n~~i~ayGqtgsGKT~Tm~ 445 (583)
+..+++.+..+....++-||++|+|||+.+.
T Consensus 31 ~~~l~~~l~~~~~~~~ll~G~~G~GKT~l~~ 61 (195)
T 1jbk_A 31 IRRTIQVLQRRTKNNPVLIGEPGVGKTAIVE 61 (195)
T ss_dssp HHHHHHHHTSSSSCEEEEECCTTSCHHHHHH
T ss_pred HHHHHHHHhcCCCCceEEECCCCCCHHHHHH
Confidence 4445555555666778999999999997653
No 72
>3te6_A Regulatory protein SIR3; heterochromatin, gene silencing, SIR complex, HMR, HML, TELO AAA+ domain, structural, nucleus, gene RE; 2.80A {Saccharomyces cerevisiae}
Probab=72.32 E-value=0.71 Score=46.66 Aligned_cols=23 Identities=13% Similarity=0.105 Sum_probs=19.4
Q ss_pred HhcccceeEEEeeccCCCceEEe
Q psy9448 422 VLSGYNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 422 ~l~G~n~~i~ayGqtgsGKT~Tm 444 (583)
+-.|...+++-||++|+|||.++
T Consensus 40 i~~~~~~~lli~GpPGTGKT~~v 62 (318)
T 3te6_A 40 LMSSQNKLFYITNADDSTKFQLV 62 (318)
T ss_dssp HHTTCCCEEEEECCCSHHHHHHH
T ss_pred hcCCCCCeEEEECCCCCCHHHHH
Confidence 34678889999999999999765
No 73
>2bjv_A PSP operon transcriptional activator; AAA, transcription activation, gene regulation, sigma54 activator, enhancer binding protein, PSPF; 1.7A {Escherichia coli} PDB: 2bjw_A 2c96_A* 2c98_A* 2c99_A* 2c9c_A* 2vii_A*
Probab=71.78 E-value=0.85 Score=44.23 Aligned_cols=44 Identities=18% Similarity=0.302 Sum_probs=20.9
Q ss_pred cccccccccccccceeehhhhhhhHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 395 FGFDRVFSQESKQVDVYKYVVNPLIDEVLSGYNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 395 f~fD~vf~~~~~q~~vy~~~~~~~v~~~l~G~n~~i~ayGqtgsGKT~Tm 444 (583)
|+||.+.+.+..-..+.+ .+..+. ..+..|+-||++|+|||+..
T Consensus 3 ~~f~~~ig~~~~~~~~~~-----~~~~~~-~~~~~vll~G~~GtGKt~la 46 (265)
T 2bjv_A 3 EYKDNLLGEANSFLEVLE-----QVSHLA-PLDKPVLIIGERGTGKELIA 46 (265)
T ss_dssp -------CCCHHHHHHHH-----HHHHHT-TSCSCEEEECCTTSCHHHHH
T ss_pred cccccceeCCHHHHHHHH-----HHHHHh-CCCCCEEEECCCCCcHHHHH
Confidence 677777664333222221 222222 23467889999999999765
No 74
>2p65_A Hypothetical protein PF08_0063; CLPB, malaria, structural genomics, structural genomics consortium, SGC, unknown function; 1.70A {Plasmodium falciparum}
Probab=71.62 E-value=1.4 Score=39.40 Aligned_cols=31 Identities=23% Similarity=0.285 Sum_probs=22.7
Q ss_pred hhhhHHHHhcccceeEEEeeccCCCceEEee
Q psy9448 415 VNPLIDEVLSGYNCTVFAYGQTGTGKTFTME 445 (583)
Q Consensus 415 ~~~~v~~~l~G~n~~i~ayGqtgsGKT~Tm~ 445 (583)
+..+++.+..+....++-||++|+|||+.+.
T Consensus 31 ~~~l~~~l~~~~~~~vll~G~~G~GKT~la~ 61 (187)
T 2p65_A 31 IRRAIQILSRRTKNNPILLGDPGVGKTAIVE 61 (187)
T ss_dssp HHHHHHHHTSSSSCEEEEESCGGGCHHHHHH
T ss_pred HHHHHHHHhCCCCCceEEECCCCCCHHHHHH
Confidence 3445555555666788999999999997663
No 75
>1p9r_A General secretion pathway protein E; bacterial type II secretion system cytoplasmic protein - GSPE, putative ATPase/ ATP binding protein; 2.50A {Vibrio cholerae} SCOP: c.37.1.11 PDB: 1p9w_A*
Probab=71.46 E-value=1.2 Score=46.90 Aligned_cols=29 Identities=21% Similarity=0.330 Sum_probs=23.5
Q ss_pred hhHHHHhcccceeEEEeeccCCCceEEee
Q psy9448 38 PLIDEVLSGYNCTVFAYGQTGTGKTFTME 66 (583)
Q Consensus 38 plv~~~l~G~n~~i~ayGqtgSGKT~Tm~ 66 (583)
+++..++..-...|...|+||||||.+|.
T Consensus 157 ~~L~~l~~~~ggii~I~GpnGSGKTTlL~ 185 (418)
T 1p9r_A 157 DNFRRLIKRPHGIILVTGPTGSGKSTTLY 185 (418)
T ss_dssp HHHHHHHTSSSEEEEEECSTTSCHHHHHH
T ss_pred HHHHHHHHhcCCeEEEECCCCCCHHHHHH
Confidence 36777776566788999999999999884
No 76
>1g8p_A Magnesium-chelatase 38 kDa subunit; parallel beta sheet, P-loop, rossman fold, AAA+, photosynthesis, metal transport; 2.10A {Rhodobacter capsulatus} SCOP: c.37.1.20 PDB: 2x31_G
Probab=71.35 E-value=1.6 Score=43.92 Aligned_cols=45 Identities=24% Similarity=0.383 Sum_probs=29.0
Q ss_pred ccccccccccccccccceeehhhhhhhHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 392 SKTFGFDRVFSQESKQVDVYKYVVNPLIDEVLSGYNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 392 ~k~f~fD~vf~~~~~q~~vy~~~~~~~v~~~l~G~n~~i~ayGqtgsGKT~Tm 444 (583)
...|+|+.+.+.+. +.. .+....+.+....++-||++|+|||+..
T Consensus 18 ~~~~~f~~i~G~~~----~~~----~l~~~~~~~~~~~vLl~G~~GtGKT~la 62 (350)
T 1g8p_A 18 RPVFPFSAIVGQED----MKL----ALLLTAVDPGIGGVLVFGDRGTGKSTAV 62 (350)
T ss_dssp CCCCCGGGSCSCHH----HHH----HHHHHHHCGGGCCEEEECCGGGCTTHHH
T ss_pred CCCCCchhccChHH----HHH----HHHHHhhCCCCceEEEECCCCccHHHHH
Confidence 35688888877642 211 1223334444556999999999999765
No 77
>3t15_A Ribulose bisphosphate carboxylase/oxygenase activ chloroplastic; photosynthesis, rubisco activase, AAA+ protein; 2.95A {Nicotiana tabacum} PDB: 3zw6_A
Probab=70.77 E-value=1.2 Score=44.27 Aligned_cols=17 Identities=29% Similarity=0.540 Sum_probs=14.3
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 428 CTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 428 ~~i~ayGqtgsGKT~Tm 444 (583)
..++-||++|+|||+..
T Consensus 37 ~~lLl~GppGtGKT~la 53 (293)
T 3t15_A 37 LILGIWGGKGQGKSFQC 53 (293)
T ss_dssp SEEEEEECTTSCHHHHH
T ss_pred eEEEEECCCCCCHHHHH
Confidence 46888999999999765
No 78
>2chg_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATPase, ATP-binding, nucleotide-binding; HET: ANP; 2.1A {Archaeoglobus fulgidus}
Probab=69.82 E-value=1.2 Score=41.07 Aligned_cols=21 Identities=33% Similarity=0.289 Sum_probs=16.6
Q ss_pred cccceeEEEeeccCCCceEEe
Q psy9448 45 SGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 45 ~G~n~~i~ayGqtgSGKT~Tm 65 (583)
.+....++-||++|+|||+.+
T Consensus 35 ~~~~~~~ll~G~~G~GKT~l~ 55 (226)
T 2chg_A 35 RKNIPHLLFSGPPGTGKTATA 55 (226)
T ss_dssp TTCCCCEEEECSTTSSHHHHH
T ss_pred CCCCCeEEEECCCCCCHHHHH
Confidence 444445999999999999876
No 79
>3jvv_A Twitching mobility protein; hexameric P-loop ATPase, secretion ATPase, ATP-binding, FIMB nucleotide-binding, transport; HET: ACP CIT; 2.60A {Pseudomonas aeruginosa} PDB: 3jvu_A*
Probab=69.62 E-value=1.3 Score=45.58 Aligned_cols=30 Identities=27% Similarity=0.346 Sum_probs=23.6
Q ss_pred hhhHHHHhcccceeEEEeeccCCCceEEee
Q psy9448 37 NPLIDEVLSGYNCTVFAYGQTGTGKTFTME 66 (583)
Q Consensus 37 ~plv~~~l~G~n~~i~ayGqtgSGKT~Tm~ 66 (583)
.+.+.+++.--.+.|...|+||||||.+|.
T Consensus 112 ~~~l~~l~~~~~g~i~I~GptGSGKTTlL~ 141 (356)
T 3jvv_A 112 GEVFKRVSDVPRGLVLVTGPTGSGKSTTLA 141 (356)
T ss_dssp CHHHHHHHHCSSEEEEEECSTTSCHHHHHH
T ss_pred hHHHHHHHhCCCCEEEEECCCCCCHHHHHH
Confidence 456667665556688899999999999884
No 80
>1qde_A EIF4A, translation initiation factor 4A; DEAD box protein family, gene regulation; 2.00A {Saccharomyces cerevisiae} SCOP: c.37.1.19 PDB: 1qva_A
Probab=69.04 E-value=2 Score=40.09 Aligned_cols=25 Identities=44% Similarity=0.542 Sum_probs=19.8
Q ss_pred hhHHHHhcccceeEEEeeccCCCceEE
Q psy9448 38 PLIDEVLSGYNCTVFAYGQTGTGKTFT 64 (583)
Q Consensus 38 plv~~~l~G~n~~i~ayGqtgSGKT~T 64 (583)
..+..+++|.| ++..++||||||.+
T Consensus 43 ~~i~~~~~~~~--~lv~~pTGsGKT~~ 67 (224)
T 1qde_A 43 RAIMPIIEGHD--VLAQAQSGTGKTGT 67 (224)
T ss_dssp HHHHHHHTTCC--EEEECCTTSSHHHH
T ss_pred HHHHHHhcCCC--EEEECCCCCcHHHH
Confidence 34666778876 67889999999977
No 81
>3t15_A Ribulose bisphosphate carboxylase/oxygenase activ chloroplastic; photosynthesis, rubisco activase, AAA+ protein; 2.95A {Nicotiana tabacum} PDB: 3zw6_A
Probab=68.67 E-value=0.68 Score=46.05 Aligned_cols=17 Identities=29% Similarity=0.540 Sum_probs=14.4
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 49 CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm 65 (583)
..++-||++|+|||+..
T Consensus 37 ~~lLl~GppGtGKT~la 53 (293)
T 3t15_A 37 LILGIWGGKGQGKSFQC 53 (293)
T ss_dssp SEEEEEECTTSCHHHHH
T ss_pred eEEEEECCCCCCHHHHH
Confidence 36788999999999865
No 82
>2kjq_A DNAA-related protein; solution structure, NESG, structural genomics, PSI-2, protei structure initiative; NMR {Neisseria meningitidis serogroup B}
Probab=68.28 E-value=1.1 Score=39.71 Aligned_cols=18 Identities=22% Similarity=0.696 Sum_probs=15.1
Q ss_pred eeEEEeeccCCCceEEee
Q psy9448 49 CTVFAYGQTGTGKTFTME 66 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm~ 66 (583)
..++-+|++|+|||+.+.
T Consensus 37 ~~~~l~G~~G~GKTtL~~ 54 (149)
T 2kjq_A 37 QFIYVWGEEGAGKSHLLQ 54 (149)
T ss_dssp SEEEEESSSTTTTCHHHH
T ss_pred CEEEEECCCCCCHHHHHH
Confidence 456779999999999884
No 83
>1vec_A ATP-dependent RNA helicase P54; DEAD-box protein, RNA binding protein; HET: TLA; 2.01A {Homo sapiens} SCOP: c.37.1.19
Probab=67.27 E-value=2.5 Score=38.85 Aligned_cols=26 Identities=35% Similarity=0.451 Sum_probs=19.5
Q ss_pred hhHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 38 PLIDEVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 38 plv~~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
..+..+++|.| ++..++||||||.+.
T Consensus 32 ~~i~~~~~~~~--~lv~apTGsGKT~~~ 57 (206)
T 1vec_A 32 ESIPIALSGRD--ILARAKNGTGKSGAY 57 (206)
T ss_dssp HHHHHHHTTCC--EEEECCSSSTTHHHH
T ss_pred HHHHHHccCCC--EEEECCCCCchHHHH
Confidence 35666778866 567889999999654
No 84
>2gxq_A Heat resistant RNA dependent ATPase; RNA helicase, atomic resolution, AMP complex, ribosome biogenesis, thermophilic, hydrolase; HET: AMP; 1.20A {Thermus thermophilus HB27} PDB: 2gxs_A* 2gxu_A 3mwj_A 3mwk_A* 3mwl_A* 3nbf_A* 3nej_A
Probab=67.15 E-value=2.4 Score=38.98 Aligned_cols=26 Identities=31% Similarity=0.528 Sum_probs=19.6
Q ss_pred hhHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 38 PLIDEVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 38 plv~~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
..+..+++|.+ ++..++||||||.+.
T Consensus 30 ~~i~~~~~~~~--~li~~~TGsGKT~~~ 55 (207)
T 2gxq_A 30 AALPLALEGKD--LIGQARTGTGKTLAF 55 (207)
T ss_dssp HHHHHHHTTCC--EEEECCTTSCHHHHH
T ss_pred HHHHHHcCCCC--EEEECCCCChHHHHH
Confidence 34566778866 567789999999863
No 85
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A
Probab=66.31 E-value=2.2 Score=39.95 Aligned_cols=26 Identities=15% Similarity=0.354 Sum_probs=19.4
Q ss_pred HHHHhc-ccceeEEEeeccCCCceEEe
Q psy9448 40 IDEVLS-GYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 40 v~~~l~-G~n~~i~ayGqtgSGKT~Tm 65 (583)
+..+.. +....++-||++|+|||+.+
T Consensus 43 l~~~~~~~~~~~~ll~G~~G~GKT~la 69 (242)
T 3bos_A 43 LKSAASGDGVQAIYLWGPVKSGRTHLI 69 (242)
T ss_dssp HHHHHHTCSCSEEEEECSTTSSHHHHH
T ss_pred HHHHHhCCCCCeEEEECCCCCCHHHHH
Confidence 334443 35678899999999999877
No 86
>3bor_A Human initiation factor 4A-II; translation initiation, DEAD BOX, structural genomics, helic binding, HOST-virus interaction, hydrolase; 1.85A {Homo sapiens} PDB: 2g9n_A*
Probab=65.71 E-value=1.8 Score=41.23 Aligned_cols=26 Identities=46% Similarity=0.643 Sum_probs=20.1
Q ss_pred hhHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 38 PLIDEVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 38 plv~~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
..+..+++|.| ++..++||||||.+.
T Consensus 59 ~ai~~i~~~~~--~li~apTGsGKT~~~ 84 (237)
T 3bor_A 59 RAIIPCIKGYD--VIAQAQSGTGKTATF 84 (237)
T ss_dssp HHHHHHHTTCC--EEECCCSSHHHHHHH
T ss_pred HHHHHHhCCCC--EEEECCCCCcHHHHH
Confidence 34566778876 678899999999763
No 87
>1tue_A Replication protein E1; helicase, replication, E1E2 complex, AAA+ protein; 2.10A {Human papillomavirus type 18} SCOP: c.37.1.20
Probab=65.19 E-value=2 Score=40.54 Aligned_cols=27 Identities=22% Similarity=0.334 Sum_probs=19.9
Q ss_pred HHHHhcccc--eeEEEeeccCCCceEEee
Q psy9448 40 IDEVLSGYN--CTVFAYGQTGTGKTFTME 66 (583)
Q Consensus 40 v~~~l~G~n--~~i~ayGqtgSGKT~Tm~ 66 (583)
+..++.|.- -+++-||+.|+|||+...
T Consensus 48 l~~~~~~iPkkn~ili~GPPGtGKTt~a~ 76 (212)
T 1tue_A 48 LKSFLKGTPKKNCLVFCGPANTGKSYFGM 76 (212)
T ss_dssp HHHHHHTCTTCSEEEEESCGGGCHHHHHH
T ss_pred HHHHHhcCCcccEEEEECCCCCCHHHHHH
Confidence 445555532 469999999999998764
No 88
>3dkp_A Probable ATP-dependent RNA helicase DDX52; DEAD, ADP, structural genomics, structural GEN consortium, SGC, rRNA, ATP-binding, hydrolase; HET: ADP; 2.10A {Homo sapiens}
Probab=64.92 E-value=2.7 Score=39.92 Aligned_cols=25 Identities=36% Similarity=0.550 Sum_probs=19.8
Q ss_pred hhHHHHhcccceeEEEeeccCCCceEE
Q psy9448 38 PLIDEVLSGYNCTVFAYGQTGTGKTFT 64 (583)
Q Consensus 38 plv~~~l~G~n~~i~ayGqtgSGKT~T 64 (583)
..+..+++|.+ ++..++||||||.+
T Consensus 58 ~~i~~~~~~~~--~l~~a~TGsGKT~~ 82 (245)
T 3dkp_A 58 QAIPVMLHGRE--LLASAPTGSGKTLA 82 (245)
T ss_dssp HHHHHHHTTCC--EEEECCTTSCHHHH
T ss_pred HHHHHHhCCCC--EEEECCCCCcHHHH
Confidence 44666778877 57788999999976
No 89
>1u0j_A DNA replication protein; AAA+ protein, P-loop atpases, helicase; HET: DNA ADP; 2.10A {Adeno-associated virus - 2} SCOP: c.37.1.20 PDB: 1s9h_A
Probab=64.83 E-value=2.6 Score=41.32 Aligned_cols=30 Identities=23% Similarity=0.270 Sum_probs=23.4
Q ss_pred hhhHHHHhccc---ceeEEEeeccCCCceEEee
Q psy9448 37 NPLIDEVLSGY---NCTVFAYGQTGTGKTFTME 66 (583)
Q Consensus 37 ~plv~~~l~G~---n~~i~ayGqtgSGKT~Tm~ 66 (583)
...+..+++|. --||+-||+.|+|||+...
T Consensus 90 ~~~l~~~l~~~~~~~n~~~l~GppgtGKt~~a~ 122 (267)
T 1u0j_A 90 ASVFLGWATKKFGKRNTIWLFGPATTGKTNIAE 122 (267)
T ss_dssp HHHHHHHHTTCSTTCCEEEEECSTTSSHHHHHH
T ss_pred HHHHHHHHhCCCCCCcEEEEECCCCCCHHHHHH
Confidence 34467788887 3489999999999997664
No 90
>3n70_A Transport activator; sigma-54, ntpase, PSI, MCSG, structural genomics, center for structural genomics; 2.80A {Escherichia coli}
Probab=64.43 E-value=2.2 Score=37.20 Aligned_cols=20 Identities=30% Similarity=0.549 Sum_probs=16.5
Q ss_pred ccceeEEEeeccCCCceEEe
Q psy9448 46 GYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 46 G~n~~i~ayGqtgSGKT~Tm 65 (583)
..+..|+-||++|+|||+..
T Consensus 22 ~~~~~vll~G~~GtGKt~lA 41 (145)
T 3n70_A 22 ETDIAVWLYGAPGTGRMTGA 41 (145)
T ss_dssp TCCSCEEEESSTTSSHHHHH
T ss_pred CCCCCEEEECCCCCCHHHHH
Confidence 45567899999999998765
No 91
>1ixz_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.37.1.20 PDB: 1iy0_A* 1iy1_A*
Probab=64.13 E-value=0.9 Score=43.76 Aligned_cols=51 Identities=22% Similarity=0.238 Sum_probs=27.4
Q ss_pred ccccccccccccccceeehhhhhhhH-HHHhccc----ceeEEEeeccCCCceEEee
Q psy9448 394 TFGFDRVFSQESKQVDVYKYVVNPLI-DEVLSGY----NCTVFAYGQTGTGKTFTME 445 (583)
Q Consensus 394 ~f~fD~vf~~~~~q~~vy~~~~~~~v-~~~l~G~----n~~i~ayGqtgsGKT~Tm~ 445 (583)
.++||.+.+.+....++-+- ...+- ..++.+. ...++-||++|+|||+.+.
T Consensus 12 ~~~~~~i~g~~~~~~~l~~l-~~~~~~~~~~~~~~~~~~~g~ll~G~~G~GKTtl~~ 67 (254)
T 1ixz_A 12 KVTFKDVAGAEEAKEELKEI-VEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLAR 67 (254)
T ss_dssp SCCGGGCCSCHHHHHHHHHH-HHHHHCHHHHHHTTCCCCSEEEEECCTTSSHHHHHH
T ss_pred CCCHHHhCCcHHHHHHHHHH-HHHHHCHHHHHHcCCCCCCeEEEECCCCCCHHHHHH
Confidence 46788877765433322221 11110 1123222 2238999999999997653
No 92
>2v1u_A Cell division control protein 6 homolog; DNA replication, nucleotide-binding, replication, archaea; HET: ADP; 3.10A {Aeropyrum pernix}
Probab=64.05 E-value=1.3 Score=45.00 Aligned_cols=20 Identities=40% Similarity=0.524 Sum_probs=16.4
Q ss_pred ccceeEEEeeccCCCceEEe
Q psy9448 425 GYNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 425 G~n~~i~ayGqtgsGKT~Tm 444 (583)
+....++-||++|+|||+.+
T Consensus 42 ~~~~~vll~G~~G~GKT~l~ 61 (387)
T 2v1u_A 42 EKPSNALLYGLTGTGKTAVA 61 (387)
T ss_dssp CCCCCEEECBCTTSSHHHHH
T ss_pred CCCCcEEEECCCCCCHHHHH
Confidence 45568999999999999654
No 93
>2eyu_A Twitching motility protein PILT; pilus retraction motor, C-terminal domain PILT, protein transport; 1.87A {Aquifex aeolicus}
Probab=64.00 E-value=1.9 Score=42.01 Aligned_cols=27 Identities=26% Similarity=0.329 Sum_probs=19.3
Q ss_pred hHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 39 LIDEVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 39 lv~~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
+++++.-.-...+.-.|++|||||.++
T Consensus 16 vl~~i~i~~g~~v~i~Gp~GsGKSTll 42 (261)
T 2eyu_A 16 KVLELCHRKMGLILVTGPTGSGKSTTI 42 (261)
T ss_dssp HHHHGGGCSSEEEEEECSTTCSHHHHH
T ss_pred HHHHHhhCCCCEEEEECCCCccHHHHH
Confidence 444443334457788999999999988
No 94
>3h4m_A Proteasome-activating nucleotidase; ATPase, PAN, ATP-binding, nucleotide-binding, HY; HET: ADP; 3.11A {Methanocaldococcus jannaschii}
Probab=63.99 E-value=1.7 Score=42.38 Aligned_cols=53 Identities=23% Similarity=0.367 Sum_probs=31.8
Q ss_pred cccccccccccccccceeehhhhhhhHH-HHhc----ccceeEEEeeccCCCceEEee
Q psy9448 393 KTFGFDRVFSQESKQVDVYKYVVNPLID-EVLS----GYNCTVFAYGQTGTGKTFTME 445 (583)
Q Consensus 393 k~f~fD~vf~~~~~q~~vy~~~~~~~v~-~~l~----G~n~~i~ayGqtgsGKT~Tm~ 445 (583)
..+.||.+.+.+..-+.+.+.+..++.. ..+. .....++-||++|+|||+.+.
T Consensus 12 ~~~~~~~i~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ll~G~~GtGKT~la~ 69 (285)
T 3h4m_A 12 PNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAK 69 (285)
T ss_dssp CCCCGGGSCSCHHHHHHHHHHTHHHHHCHHHHHHHCCCCCSEEEEESSSSSSHHHHHH
T ss_pred CCCCHHHhcCHHHHHHHHHHHHHHHhhCHHHHHhcCCCCCCeEEEECCCCCcHHHHHH
Confidence 3577888887765544444443332211 1111 234568999999999997653
No 95
>3ly5_A ATP-dependent RNA helicase DDX18; alpha-beta, structural genomics, structural genomics consort ATP-binding, hydrolase, nucleotide-binding, RNA-B; 2.80A {Homo sapiens}
Probab=63.60 E-value=2.2 Score=41.38 Aligned_cols=26 Identities=35% Similarity=0.598 Sum_probs=20.3
Q ss_pred hhHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 38 PLIDEVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 38 plv~~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
..+..++.|.| ++..++||||||.+.
T Consensus 83 ~~i~~~~~~~~--~lv~a~TGsGKT~~~ 108 (262)
T 3ly5_A 83 KSIRPLLEGRD--LLAAAKTGSGKTLAF 108 (262)
T ss_dssp HHHHHHHHTCC--CEECCCTTSCHHHHH
T ss_pred HHHHHHhCCCc--EEEEccCCCCchHHH
Confidence 45667778876 578899999999763
No 96
>4b4t_I 26S protease regulatory subunit 4 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=62.87 E-value=46 Score=34.77 Aligned_cols=77 Identities=26% Similarity=0.298 Sum_probs=47.0
Q ss_pred cccccccccccccceeehhhhhhhHH-HHhc--c--cceeEEEeeccCCCceEEe--------------eccccCCCCcc
Q psy9448 395 FGFDRVFSQESKQVDVYKYVVNPLID-EVLS--G--YNCTVFAYGQTGTGKTFTM--------------EGEKSNDPSIS 455 (583)
Q Consensus 395 f~fD~vf~~~~~q~~vy~~~~~~~v~-~~l~--G--~n~~i~ayGqtgsGKT~Tm--------------~G~~~~~~~~~ 455 (583)
-+||-|=+-+.--+++.+.+..|+.. ..+. | ..-.|+-||+.|+|||... -|+.-
T Consensus 179 v~~~DIgGld~~k~~L~e~v~~Pl~~pe~f~~~Gi~~prGvLLyGPPGTGKTlLAkAiA~e~~~~fi~v~~s~l------ 252 (437)
T 4b4t_I 179 ESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSEL------ 252 (437)
T ss_dssp CCGGGTCSCHHHHHHHHHHHHHHHHCCHHHHHHTCCCCSEEEEESSTTTTHHHHHHHHHHHHTCEEEEEESGGG------
T ss_pred CcceecCcHHHHHHHHHHHHHHHHhCHHHHHhCCCCCCCCCceECCCCchHHHHHHHHHHHhCCCEEEEEHHHh------
Confidence 45666666655555555555555542 2343 2 2357999999999998432 22211
Q ss_pred cccCCCCccchhhhhhhhHHhhcc
Q psy9448 456 WQDDPLSGIVPRAMNHLFDELRLL 479 (583)
Q Consensus 456 ~~~~~~~Giipr~~~~lf~~~~~~ 479 (583)
-....|--.+.++.+|......
T Consensus 253 --~sk~vGesek~ir~lF~~Ar~~ 274 (437)
T 4b4t_I 253 --IQKYLGDGPRLCRQIFKVAGEN 274 (437)
T ss_dssp --CCSSSSHHHHHHHHHHHHHHHT
T ss_pred --hhccCchHHHHHHHHHHHHHhc
Confidence 1223477788999999876543
No 97
>1l8q_A Chromosomal replication initiator protein DNAA; AAA+, helix-turn-helix, nucleotide-binding, DNA binding, REP initiation, DNA binding protein; HET: ADP; 2.70A {Aquifex aeolicus} SCOP: a.4.12.2 c.37.1.20 PDB: 3r8f_A* 2hcb_A*
Probab=62.68 E-value=2.4 Score=42.28 Aligned_cols=50 Identities=20% Similarity=0.442 Sum_probs=27.8
Q ss_pred cccccccccccccccceeehhhhhhhHHHHhcccceeEEEeeccCCCceEEee
Q psy9448 393 KTFGFDRVFSQESKQVDVYKYVVNPLIDEVLSGYNCTVFAYGQTGTGKTFTME 445 (583)
Q Consensus 393 k~f~fD~vf~~~~~q~~vy~~~~~~~v~~~l~G~n~~i~ayGqtgsGKT~Tm~ 445 (583)
..|+||..... ..+...+.. +..+++.- .+....++-||++|+|||+.+.
T Consensus 6 ~~~~f~~fv~g-~~~~~a~~~-~~~~~~~~-~~~~~~lll~G~~GtGKT~la~ 55 (324)
T 1l8q_A 6 PKYTLENFIVG-EGNRLAYEV-VKEALENL-GSLYNPIFIYGSVGTGKTHLLQ 55 (324)
T ss_dssp TTCCSSSCCCC-TTTHHHHHH-HHHHHHTT-TTSCSSEEEECSSSSSHHHHHH
T ss_pred CCCCcccCCCC-CcHHHHHHH-HHHHHhCc-CCCCCeEEEECCCCCcHHHHHH
Confidence 45788776522 223333332 22233221 1123578999999999998764
No 98
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A
Probab=62.33 E-value=3.6 Score=38.43 Aligned_cols=20 Identities=15% Similarity=0.383 Sum_probs=16.6
Q ss_pred ccceeEEEeeccCCCceEEe
Q psy9448 425 GYNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 425 G~n~~i~ayGqtgsGKT~Tm 444 (583)
+....++-||++|+|||+.+
T Consensus 50 ~~~~~~ll~G~~G~GKT~la 69 (242)
T 3bos_A 50 DGVQAIYLWGPVKSGRTHLI 69 (242)
T ss_dssp CSCSEEEEECSTTSSHHHHH
T ss_pred CCCCeEEEECCCCCCHHHHH
Confidence 35568899999999999765
No 99
>3co5_A Putative two-component system transcriptional RES regulator; structural genomics, APC89341.1; 2.40A {Neisseria gonorrhoeae}
Probab=62.23 E-value=1.9 Score=37.55 Aligned_cols=21 Identities=19% Similarity=0.188 Sum_probs=16.6
Q ss_pred cceeEEEeeccCCCceEEeec
Q psy9448 47 YNCTVFAYGQTGTGKTFTMEG 67 (583)
Q Consensus 47 ~n~~i~ayGqtgSGKT~Tm~G 67 (583)
.+..|+-||++|+|||+....
T Consensus 26 ~~~~vll~G~~GtGKt~lA~~ 46 (143)
T 3co5_A 26 RTSPVFLTGEAGSPFETVARY 46 (143)
T ss_dssp CSSCEEEEEETTCCHHHHHGG
T ss_pred CCCcEEEECCCCccHHHHHHH
Confidence 345688899999999987643
No 100
>2pl3_A Probable ATP-dependent RNA helicase DDX10; DEAD, structural genomics, structural genomic consortium, SGC, hydrolase; HET: ADP; 2.15A {Homo sapiens}
Probab=62.21 E-value=3.3 Score=39.08 Aligned_cols=26 Identities=35% Similarity=0.560 Sum_probs=19.5
Q ss_pred hhHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 38 PLIDEVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 38 plv~~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
..+..+++|.+ ++..++||||||.+.
T Consensus 54 ~~i~~~~~~~~--~li~a~TGsGKT~~~ 79 (236)
T 2pl3_A 54 QTIGLALQGKD--VLGAAKTGSGKTLAF 79 (236)
T ss_dssp HHHHHHHTTCC--EEEECCTTSCHHHHH
T ss_pred HHHHHHhCCCC--EEEEeCCCCcHHHHH
Confidence 34566778876 567789999999763
No 101
>3iuy_A Probable ATP-dependent RNA helicase DDX53; REC-A-like, DEAD-BOX, structural genomics, structural genomi consortium, SGC, ATP-binding, hydrolase; HET: AMP; 2.40A {Homo sapiens}
Probab=61.21 E-value=3.4 Score=38.74 Aligned_cols=26 Identities=35% Similarity=0.484 Sum_probs=19.5
Q ss_pred hhHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 38 PLIDEVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 38 plv~~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
..+..+++|.|+ +..++||||||.+.
T Consensus 49 ~~i~~~~~~~~~--l~~apTGsGKT~~~ 74 (228)
T 3iuy_A 49 QAWPIILQGIDL--IVVAQTGTGKTLSY 74 (228)
T ss_dssp HHHHHHHTTCCE--EEECCTTSCHHHHH
T ss_pred HHHHHHhCCCCE--EEECCCCChHHHHH
Confidence 345667788765 67789999999764
No 102
>3cf0_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48, ATP-binding, lipid-binding, nucle binding, nucleus, phosphoprotein, transport; HET: ADP; 3.00A {Mus musculus}
Probab=60.89 E-value=1.3 Score=44.15 Aligned_cols=18 Identities=39% Similarity=0.608 Sum_probs=15.5
Q ss_pred ceeEEEeeccCCCceEEe
Q psy9448 48 NCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 48 n~~i~ayGqtgSGKT~Tm 65 (583)
...|+-||++|+|||+.+
T Consensus 49 ~~~vLL~Gp~GtGKT~la 66 (301)
T 3cf0_A 49 SKGVLFYGPPGCGKTLLA 66 (301)
T ss_dssp CSEEEEECSSSSSHHHHH
T ss_pred CceEEEECCCCcCHHHHH
Confidence 456899999999999876
No 103
>1d2n_A N-ethylmaleimide-sensitive fusion protein; hexamerization domain, ATPase, transport; HET: ANP; 1.75A {Cricetulus griseus} SCOP: c.37.1.20 PDB: 1nsf_A*
Probab=60.80 E-value=3.4 Score=40.02 Aligned_cols=21 Identities=24% Similarity=0.164 Sum_probs=17.6
Q ss_pred cccceeEEEeeccCCCceEEe
Q psy9448 424 SGYNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 424 ~G~n~~i~ayGqtgsGKT~Tm 444 (583)
......++-||++|+|||+..
T Consensus 61 ~~~~~~vLl~G~~GtGKT~la 81 (272)
T 1d2n_A 61 RTPLVSVLLEGPPHSGKTALA 81 (272)
T ss_dssp SCSEEEEEEECSTTSSHHHHH
T ss_pred CCCCeEEEEECCCCCcHHHHH
Confidence 455678999999999999765
No 104
>3cf0_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48, ATP-binding, lipid-binding, nucle binding, nucleus, phosphoprotein, transport; HET: ADP; 3.00A {Mus musculus}
Probab=60.74 E-value=2.4 Score=42.11 Aligned_cols=51 Identities=20% Similarity=0.294 Sum_probs=30.3
Q ss_pred ccccccccccccccceeehhhhhhhHH-HHhc----ccceeEEEeeccCCCceEEe
Q psy9448 394 TFGFDRVFSQESKQVDVYKYVVNPLID-EVLS----GYNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 394 ~f~fD~vf~~~~~q~~vy~~~~~~~v~-~~l~----G~n~~i~ayGqtgsGKT~Tm 444 (583)
..+||.+.+.+..-+.+.+.+..|+.. ..+. .....++-||++|+|||+.+
T Consensus 11 ~~~~~di~G~~~~~~~l~~~v~~~~~~~~~~~~~~~~~~~~vLL~Gp~GtGKT~la 66 (301)
T 3cf0_A 11 QVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLA 66 (301)
T ss_dssp CCCGGGSCSCHHHHHHHHHHHHHHHHCHHHHHHHCCCCCSEEEEECSSSSSHHHHH
T ss_pred CCCHHHhCCHHHHHHHHHHHHHHHhhCHHHHHHcCCCCCceEEEECCCCcCHHHHH
Confidence 356777777655444444444333221 1122 23456899999999999754
No 105
>3uk6_A RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding, hydrolase; HET: ADP; 2.95A {Homo sapiens} PDB: 2xsz_D*
Probab=60.39 E-value=3.3 Score=41.92 Aligned_cols=29 Identities=31% Similarity=0.404 Sum_probs=21.7
Q ss_pred hhHHHHhcccce--eEEEeeccCCCceEEee
Q psy9448 38 PLIDEVLSGYNC--TVFAYGQTGTGKTFTME 66 (583)
Q Consensus 38 plv~~~l~G~n~--~i~ayGqtgSGKT~Tm~ 66 (583)
.+++.+-.|... .++-||++|+|||+...
T Consensus 58 ~l~~~~~~~~~~~~~vLl~GppGtGKT~la~ 88 (368)
T 3uk6_A 58 VVLEMIREGKIAGRAVLIAGQPGTGKTAIAM 88 (368)
T ss_dssp HHHHHHHTTCCTTCEEEEEESTTSSHHHHHH
T ss_pred HHHHHHHcCCCCCCEEEEECCCCCCHHHHHH
Confidence 345555566654 89999999999998763
No 106
>2bjv_A PSP operon transcriptional activator; AAA, transcription activation, gene regulation, sigma54 activator, enhancer binding protein, PSPF; 1.7A {Escherichia coli} PDB: 2bjw_A 2c96_A* 2c98_A* 2c99_A* 2c9c_A* 2vii_A*
Probab=60.33 E-value=2.7 Score=40.55 Aligned_cols=19 Identities=32% Similarity=0.545 Sum_probs=16.0
Q ss_pred cceeEEEeeccCCCceEEe
Q psy9448 47 YNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 47 ~n~~i~ayGqtgSGKT~Tm 65 (583)
.+..|+-||++|+|||+..
T Consensus 28 ~~~~vll~G~~GtGKt~la 46 (265)
T 2bjv_A 28 LDKPVLIIGERGTGKELIA 46 (265)
T ss_dssp SCSCEEEECCTTSCHHHHH
T ss_pred CCCCEEEECCCCCcHHHHH
Confidence 3567889999999999876
No 107
>1wrb_A DJVLGB; RNA helicase, DEAD BOX, VASA, structural genomics, NPPSFA, N project on protein structural and functional analyses; 2.40A {Dugesia japonica} SCOP: c.37.1.19
Probab=59.98 E-value=3.8 Score=39.14 Aligned_cols=26 Identities=35% Similarity=0.515 Sum_probs=19.6
Q ss_pred hhHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 38 PLIDEVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 38 plv~~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
..+..+++|.| ++..++||||||.+.
T Consensus 52 ~~i~~i~~~~~--~l~~a~TGsGKT~~~ 77 (253)
T 1wrb_A 52 NAIPAILEHRD--IMACAQTGSGKTAAF 77 (253)
T ss_dssp HHHHHHHTTCC--EEEECCTTSSHHHHH
T ss_pred HHHHHHhCCCC--EEEECCCCChHHHHH
Confidence 35667788877 466789999999653
No 108
>1t6n_A Probable ATP-dependent RNA helicase; RECA-like fold, PRE-mRNA processing protein; HET: FLC; 1.94A {Homo sapiens} SCOP: c.37.1.19
Probab=59.76 E-value=3.9 Score=38.03 Aligned_cols=26 Identities=27% Similarity=0.484 Sum_probs=19.6
Q ss_pred hhHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 38 PLIDEVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 38 plv~~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
..+..+++|.| ++..++||||||.+.
T Consensus 43 ~~i~~~~~~~~--~li~~~TGsGKT~~~ 68 (220)
T 1t6n_A 43 ECIPQAILGMD--VLCQAKSGMGKTAVF 68 (220)
T ss_dssp HHHHHHHTTCC--EEEECCTTSCHHHHH
T ss_pred HHHHHHhCCCC--EEEECCCCCchhhhh
Confidence 34566778877 566789999999754
No 109
>2x8a_A Nuclear valosin-containing protein-like; nuclear protein; 2.60A {Homo sapiens}
Probab=59.76 E-value=0.52 Score=46.45 Aligned_cols=48 Identities=15% Similarity=0.215 Sum_probs=26.0
Q ss_pred ehhhcccCCceEEEeehhhhhhHH-HHhcccc----eeEEEeeccCCCceEEe
Q psy9448 18 MFLVCIFYTTIVDVYKYVVNPLID-EVLSGYN----CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 18 ~D~Vf~~~~tq~~vy~~~~~plv~-~~l~G~n----~~i~ayGqtgSGKT~Tm 65 (583)
||.|-+.+..-+++.+.++.|+-. .++++++ ..++-||++|+|||+.+
T Consensus 9 ~~di~g~~~~~~~l~~~i~~~~~~~~~l~~~~l~~~~GvlL~Gp~GtGKTtLa 61 (274)
T 2x8a_A 9 WADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLA 61 (274)
T ss_dssp ---CCHHHHHHHHHHHHHTHHHHSHHHHHHTTCCCCSEEEEESSTTSCHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHHhhCHHHHHHcCCCCCCeEEEECCCCCcHHHHH
Confidence 444544444334444444444432 2344333 22899999999999765
No 110
>3syl_A Protein CBBX; photosynthesis, rubisco activase, AAA+ protein, calvin cycle chaperone; 3.00A {Rhodobacter sphaeroides} PDB: 3syk_A 3zuh_A*
Probab=59.33 E-value=3.8 Score=40.27 Aligned_cols=19 Identities=32% Similarity=0.284 Sum_probs=15.9
Q ss_pred cceeEEEeeccCCCceEEe
Q psy9448 47 YNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 47 ~n~~i~ayGqtgSGKT~Tm 65 (583)
-...|+-||++|+|||+..
T Consensus 66 ~~~~vll~G~~GtGKT~la 84 (309)
T 3syl_A 66 PTLHMSFTGNPGTGKTTVA 84 (309)
T ss_dssp CCCEEEEEECTTSSHHHHH
T ss_pred CCceEEEECCCCCCHHHHH
Confidence 3446999999999999876
No 111
>1sxj_D Activator 1 41 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=59.29 E-value=2.2 Score=42.77 Aligned_cols=30 Identities=37% Similarity=0.425 Sum_probs=20.6
Q ss_pred hhhhHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 36 VNPLIDEVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 36 ~~plv~~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
+..+...+..|....++-||++|+|||+++
T Consensus 46 ~~~l~~~l~~~~~~~~ll~G~~G~GKT~la 75 (353)
T 1sxj_D 46 VTVLKKTLKSANLPHMLFYGPPGTGKTSTI 75 (353)
T ss_dssp HHHHHHHTTCTTCCCEEEECSTTSSHHHHH
T ss_pred HHHHHHHHhcCCCCEEEEECCCCCCHHHHH
Confidence 344444444553344889999999999876
No 112
>1d2n_A N-ethylmaleimide-sensitive fusion protein; hexamerization domain, ATPase, transport; HET: ANP; 1.75A {Cricetulus griseus} SCOP: c.37.1.20 PDB: 1nsf_A*
Probab=59.11 E-value=3 Score=40.49 Aligned_cols=21 Identities=24% Similarity=0.164 Sum_probs=17.9
Q ss_pred cccceeEEEeeccCCCceEEe
Q psy9448 45 SGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 45 ~G~n~~i~ayGqtgSGKT~Tm 65 (583)
......++-||++|+|||+..
T Consensus 61 ~~~~~~vLl~G~~GtGKT~la 81 (272)
T 1d2n_A 61 RTPLVSVLLEGPPHSGKTALA 81 (272)
T ss_dssp SCSEEEEEEECSTTSSHHHHH
T ss_pred CCCCeEEEEECCCCCcHHHHH
Confidence 456678999999999999876
No 113
>1ixz_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.37.1.20 PDB: 1iy0_A* 1iy1_A*
Probab=58.36 E-value=1.8 Score=41.52 Aligned_cols=16 Identities=38% Similarity=0.528 Sum_probs=14.4
Q ss_pred eEEEeeccCCCceEEe
Q psy9448 50 TVFAYGQTGTGKTFTM 65 (583)
Q Consensus 50 ~i~ayGqtgSGKT~Tm 65 (583)
.++-||++|+|||+.+
T Consensus 51 g~ll~G~~G~GKTtl~ 66 (254)
T 1ixz_A 51 GVLLVGPPGVGKTHLA 66 (254)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred eEEEECCCCCCHHHHH
Confidence 3899999999999877
No 114
>3fmo_B ATP-dependent RNA helicase DDX19B; nuclear porin, nuclear pore complex, nucleocytoplasmic trans mRNA export, protein interaction, beta-propeller; HET: ADP; 2.51A {Homo sapiens}
Probab=58.33 E-value=3.9 Score=40.53 Aligned_cols=27 Identities=30% Similarity=0.341 Sum_probs=20.1
Q ss_pred hHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 39 LIDEVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 39 lv~~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
.+..++.|-..-+++.++||||||.+.
T Consensus 122 ai~~il~~~~~~~l~~a~TGsGKT~a~ 148 (300)
T 3fmo_B 122 ALPLMLAEPPQNLIAQSQSGTGKTAAF 148 (300)
T ss_dssp HHHHHTSSSCCCEEEECCTTSSHHHHH
T ss_pred HHHHHHcCCCCeEEEECCCCCCccHHH
Confidence 455667774455788999999999763
No 115
>3b9p_A CG5977-PA, isoform A; AAA ATPase, ATP-binding, nucleotide-binding, hydrolase; 2.70A {Drosophila melanogaster}
Probab=58.32 E-value=2.3 Score=41.76 Aligned_cols=51 Identities=20% Similarity=0.408 Sum_probs=29.7
Q ss_pred ccccccccccccccceeehhhhhhhHH-HHhcc---cceeEEEeeccCCCceEEe
Q psy9448 394 TFGFDRVFSQESKQVDVYKYVVNPLID-EVLSG---YNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 394 ~f~fD~vf~~~~~q~~vy~~~~~~~v~-~~l~G---~n~~i~ayGqtgsGKT~Tm 444 (583)
...||.+.+.+..-..+.+.+..|+.. ..+.| ....++-||++|+|||+.+
T Consensus 17 ~~~~~~i~G~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~vll~Gp~GtGKT~la 71 (297)
T 3b9p_A 17 KVEWTDIAGQDVAKQALQEMVILPSVRPELFTGLRAPAKGLLLFGPPGNGKTLLA 71 (297)
T ss_dssp CCCGGGSCCCHHHHHHHHHHTHHHHHCGGGSCGGGCCCSEEEEESSSSSCHHHHH
T ss_pred CCCHHHhCChHHHHHHHHHHHHhhhhCHHHHhcCCCCCCeEEEECcCCCCHHHHH
Confidence 356777777654444444433333321 12222 3467999999999999654
No 116
>2r62_A Cell division protease FTSH homolog; ATPase domain, ATP-binding, cell CELL division, hydrolase, membrane, metal-binding; 3.30A {Helicobacter pylori} PDB: 2r65_A*
Probab=58.10 E-value=2.3 Score=41.12 Aligned_cols=50 Identities=26% Similarity=0.307 Sum_probs=28.8
Q ss_pred ccccccccccccccceeehhhhhhhH-HHHhc----ccceeEEEeeccCCCceEEe
Q psy9448 394 TFGFDRVFSQESKQVDVYKYVVNPLI-DEVLS----GYNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 394 ~f~fD~vf~~~~~q~~vy~~~~~~~v-~~~l~----G~n~~i~ayGqtgsGKT~Tm 444 (583)
.+.|+.+.+.+...+.+.+. +..+- ...+. .....++-||++|+|||+.+
T Consensus 7 ~~~~~~i~G~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~vll~G~~GtGKT~la 61 (268)
T 2r62_A 7 NVRFKDMAGNEEAKEEVVEI-VDFLKYPERYANLGAKIPKGVLLVGPPGTGKTLLA 61 (268)
T ss_dssp CCCSTTSSSCTTTHHHHHHH-HHHHHCHHHHHHHSCCCCSCCCCBCSSCSSHHHHH
T ss_pred CCCHHHhCCcHHHHHHHHHH-HHHHHChHHHHHCCCCCCceEEEECCCCCcHHHHH
Confidence 46778888776554444332 22111 01111 22345889999999999876
No 117
>2ewv_A Twitching motility protein PILT; pilus retraction motor, ATPase, hexameric PILT, protein TRAN; HET: ADP; 2.80A {Aquifex aeolicus} PDB: 2eww_A* 2gsz_A*
Probab=58.07 E-value=2.7 Score=43.28 Aligned_cols=28 Identities=25% Similarity=0.309 Sum_probs=20.6
Q ss_pred hhHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 38 PLIDEVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 38 plv~~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
+++..+.---...+.-.|+||||||.+|
T Consensus 126 ~~l~~l~~~~g~~i~ivG~~GsGKTTll 153 (372)
T 2ewv_A 126 DKVLELCHRKMGLILVTGPTGSGKSTTI 153 (372)
T ss_dssp SSHHHHTTSSSEEEEEECSSSSSHHHHH
T ss_pred HHHHHHhhcCCCEEEEECCCCCCHHHHH
Confidence 4455544334567888999999999988
No 118
>2kjq_A DNAA-related protein; solution structure, NESG, structural genomics, PSI-2, protei structure initiative; NMR {Neisseria meningitidis serogroup B}
Probab=57.87 E-value=2.2 Score=37.69 Aligned_cols=18 Identities=22% Similarity=0.696 Sum_probs=14.7
Q ss_pred eeEEEeeccCCCceEEee
Q psy9448 428 CTVFAYGQTGTGKTFTME 445 (583)
Q Consensus 428 ~~i~ayGqtgsGKT~Tm~ 445 (583)
-.++-+|++|+|||+.+.
T Consensus 37 ~~~~l~G~~G~GKTtL~~ 54 (149)
T 2kjq_A 37 QFIYVWGEEGAGKSHLLQ 54 (149)
T ss_dssp SEEEEESSSTTTTCHHHH
T ss_pred CEEEEECCCCCCHHHHHH
Confidence 356779999999997764
No 119
>3d8b_A Fidgetin-like protein 1; AAA+, ATPase, ADP, SGC, structural genomics consortium, ATP- hydrolase, magnesium, metal-binding, nucleotide-binding; HET: ADP; 2.00A {Homo sapiens}
Probab=57.68 E-value=2.1 Score=43.74 Aligned_cols=50 Identities=24% Similarity=0.439 Sum_probs=28.2
Q ss_pred cccccccccccccceeehhhhhhhHHH-H---hcccceeEEEeeccCCCceEEe
Q psy9448 395 FGFDRVFSQESKQVDVYKYVVNPLIDE-V---LSGYNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 395 f~fD~vf~~~~~q~~vy~~~~~~~v~~-~---l~G~n~~i~ayGqtgsGKT~Tm 444 (583)
..||.+.+.+..-+.+.+.+..|+... . +.+....|+-||++|+|||+.+
T Consensus 81 ~~~~~i~G~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~vLl~GppGtGKT~la 134 (357)
T 3d8b_A 81 VNWEDIAGVEFAKATIKEIVVWPMLRPDIFTGLRGPPKGILLFGPPGTGKTLIG 134 (357)
T ss_dssp CCGGGSCSCHHHHHHHHHHTHHHHHCTTTSCGGGSCCSEEEEESSTTSSHHHHH
T ss_pred CCHHHhCChHHHHHHHHHHHHHHhhChHhHhhccCCCceEEEECCCCCCHHHHH
Confidence 456666665443333333333322211 1 2244567999999999999764
No 120
>3fe2_A Probable ATP-dependent RNA helicase DDX5; DEAD, ADP, ATP-binding, hydrolase, nucleotide- RNA-binding, methylation, mRNA processing, mRNA S nucleus; HET: ADP; 2.60A {Homo sapiens} PDB: 4a4d_A
Probab=57.44 E-value=4.3 Score=38.53 Aligned_cols=26 Identities=35% Similarity=0.438 Sum_probs=19.2
Q ss_pred hhHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 38 PLIDEVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 38 plv~~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
..+..+++|.|. +..++||||||.+.
T Consensus 58 ~~i~~~~~g~~~--l~~apTGsGKT~~~ 83 (242)
T 3fe2_A 58 QGWPVALSGLDM--VGVAQTGSGKTLSY 83 (242)
T ss_dssp HHHHHHHHTCCE--EEEECTTSCHHHHH
T ss_pred HHHHHHhCCCCE--EEECCCcCHHHHHH
Confidence 345667788764 56679999999773
No 121
>1qde_A EIF4A, translation initiation factor 4A; DEAD box protein family, gene regulation; 2.00A {Saccharomyces cerevisiae} SCOP: c.37.1.19 PDB: 1qva_A
Probab=57.26 E-value=4.4 Score=37.74 Aligned_cols=24 Identities=46% Similarity=0.577 Sum_probs=18.9
Q ss_pred hHHHHhcccceeEEEeeccCCCceEE
Q psy9448 418 LIDEVLSGYNCTVFAYGQTGTGKTFT 443 (583)
Q Consensus 418 ~v~~~l~G~n~~i~ayGqtgsGKT~T 443 (583)
.+..+++|.+ ++..++||||||.+
T Consensus 44 ~i~~~~~~~~--~lv~~pTGsGKT~~ 67 (224)
T 1qde_A 44 AIMPIIEGHD--VLAQAQSGTGKTGT 67 (224)
T ss_dssp HHHHHHTTCC--EEEECCTTSSHHHH
T ss_pred HHHHHhcCCC--EEEECCCCCcHHHH
Confidence 4555677765 78899999999977
No 122
>1sxj_C Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=56.97 E-value=2.8 Score=42.24 Aligned_cols=32 Identities=34% Similarity=0.400 Sum_probs=20.9
Q ss_pred hhhhhHHHHhcccceeEEEeeccCCCceEEee
Q psy9448 35 VVNPLIDEVLSGYNCTVFAYGQTGTGKTFTME 66 (583)
Q Consensus 35 ~~~plv~~~l~G~n~~i~ayGqtgSGKT~Tm~ 66 (583)
++..+-..+-.|.-..++-||+.|+|||+++.
T Consensus 33 ~~~~L~~~i~~g~~~~~ll~Gp~G~GKTtla~ 64 (340)
T 1sxj_C 33 VITTVRKFVDEGKLPHLLFYGPPGTGKTSTIV 64 (340)
T ss_dssp HHHHHHHHHHTTCCCCEEEECSSSSSHHHHHH
T ss_pred HHHHHHHHHhcCCCceEEEECCCCCCHHHHHH
Confidence 33444444445543337889999999998873
No 123
>3ber_A Probable ATP-dependent RNA helicase DDX47; DEAD, AMP, structural genomics, structural GEN consortium, SGC, ATP-binding, hydrolase; HET: AMP PGE; 1.40A {Homo sapiens}
Probab=56.89 E-value=4.6 Score=38.72 Aligned_cols=25 Identities=32% Similarity=0.498 Sum_probs=18.5
Q ss_pred hHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 39 LIDEVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 39 lv~~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
.+..+++|.+ ++..++||||||.+.
T Consensus 73 ~i~~i~~~~~--~lv~a~TGsGKT~~~ 97 (249)
T 3ber_A 73 AIPLALQGRD--IIGLAETGSGKTGAF 97 (249)
T ss_dssp HHHHHHTTCC--EEEECCTTSCHHHHH
T ss_pred HHHHHhCCCC--EEEEcCCCCCchhHh
Confidence 4556677866 566789999999763
No 124
>2oxc_A Probable ATP-dependent RNA helicase DDX20; DEAD, structural genomics, structural genomics consortium, SGC, hydrolase; HET: ADP; 1.30A {Homo sapiens} PDB: 3b7g_A*
Probab=56.81 E-value=4.7 Score=37.94 Aligned_cols=24 Identities=29% Similarity=0.390 Sum_probs=18.5
Q ss_pred hHHHHhcccceeEEEeeccCCCceEE
Q psy9448 39 LIDEVLSGYNCTVFAYGQTGTGKTFT 64 (583)
Q Consensus 39 lv~~~l~G~n~~i~ayGqtgSGKT~T 64 (583)
.+..+++|.| ++..++||||||.+
T Consensus 54 ~i~~~~~~~~--~l~~a~TGsGKT~~ 77 (230)
T 2oxc_A 54 AIPLGRCGLD--LIVQAKSGTGKTCV 77 (230)
T ss_dssp HHHHHHTTCC--EEEECCTTSSHHHH
T ss_pred HHHHHhCCCC--EEEECCCCCcHHHH
Confidence 4566778876 46678999999976
No 125
>3llm_A ATP-dependent RNA helicase A; alpha-beta-alpha, structural genomics, structural genomics consortium, SGC, activator, ATP-binding, DNA-binding; HET: ADP; 2.80A {Homo sapiens}
Probab=56.52 E-value=4.5 Score=38.32 Aligned_cols=27 Identities=26% Similarity=0.457 Sum_probs=19.2
Q ss_pred hhhHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 37 NPLIDEVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 37 ~plv~~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
..++..+.+|. .++..|+||||||..+
T Consensus 67 ~~~i~~i~~g~--~~~i~g~TGsGKTt~~ 93 (235)
T 3llm_A 67 SEILEAISQNS--VVIIRGATGCGKTTQV 93 (235)
T ss_dssp HHHHHHHHHCS--EEEEECCTTSSHHHHH
T ss_pred HHHHHHHhcCC--EEEEEeCCCCCcHHhH
Confidence 34555666675 4577899999999754
No 126
>1gvn_B Zeta; postsegregational killing system, plasmid; 1.95A {Streptococcus pyogenes} SCOP: c.37.1.21 PDB: 3q8x_B*
Probab=56.43 E-value=4 Score=40.27 Aligned_cols=31 Identities=29% Similarity=0.414 Sum_probs=21.9
Q ss_pred hhhhhHHHHhccc-----ceeEEEeeccCCCceEEe
Q psy9448 35 VVNPLIDEVLSGY-----NCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 35 ~~~plv~~~l~G~-----n~~i~ayGqtgSGKT~Tm 65 (583)
++..++..++.|+ ...|+..|++|||||+..
T Consensus 15 ~~~~~~~~~l~~~~~~~~~~livl~G~sGsGKSTla 50 (287)
T 1gvn_B 15 RLNDNLEELIQGKKAVESPTAFLLGGQPGSGKTSLR 50 (287)
T ss_dssp HHHHHHHHHHTTCCCCSSCEEEEEECCTTSCTHHHH
T ss_pred HHHHHHHHHhccccCCCCCeEEEEECCCCCCHHHHH
Confidence 4455666666543 356889999999999764
No 127
>1iy2_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 3.20A {Thermus thermophilus} SCOP: c.37.1.20
Probab=56.11 E-value=1.4 Score=43.19 Aligned_cols=17 Identities=35% Similarity=0.505 Sum_probs=14.3
Q ss_pred eEEEeeccCCCceEEee
Q psy9448 429 TVFAYGQTGTGKTFTME 445 (583)
Q Consensus 429 ~i~ayGqtgsGKT~Tm~ 445 (583)
.++-||++|+|||+.+.
T Consensus 75 gvll~Gp~GtGKTtl~~ 91 (278)
T 1iy2_A 75 GVLLVGPPGVGKTHLAR 91 (278)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred eEEEECCCcChHHHHHH
Confidence 38999999999997653
No 128
>3d8b_A Fidgetin-like protein 1; AAA+, ATPase, ADP, SGC, structural genomics consortium, ATP- hydrolase, magnesium, metal-binding, nucleotide-binding; HET: ADP; 2.00A {Homo sapiens}
Probab=55.84 E-value=1.2 Score=45.44 Aligned_cols=20 Identities=35% Similarity=0.559 Sum_probs=16.8
Q ss_pred ccceeEEEeeccCCCceEEe
Q psy9448 46 GYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 46 G~n~~i~ayGqtgSGKT~Tm 65 (583)
+....|+-||++|+|||+..
T Consensus 115 ~~~~~vLl~GppGtGKT~la 134 (357)
T 3d8b_A 115 GPPKGILLFGPPGTGKTLIG 134 (357)
T ss_dssp SCCSEEEEESSTTSSHHHHH
T ss_pred CCCceEEEECCCCCCHHHHH
Confidence 44567999999999999876
No 129
>3b6e_A Interferon-induced helicase C domain-containing P; DECH, DEXD/H RNA-binding helicase, innate immunity, IFIH1, S genomics; 1.60A {Homo sapiens}
Probab=55.83 E-value=3 Score=38.34 Aligned_cols=27 Identities=30% Similarity=0.357 Sum_probs=20.1
Q ss_pred hhHHHHhcccceeEEEeeccCCCceEEee
Q psy9448 38 PLIDEVLSGYNCTVFAYGQTGTGKTFTME 66 (583)
Q Consensus 38 plv~~~l~G~n~~i~ayGqtgSGKT~Tm~ 66 (583)
..++.+++|.+ ++..++||||||.+..
T Consensus 40 ~~i~~~~~~~~--~li~~~tGsGKT~~~~ 66 (216)
T 3b6e_A 40 EVAQPALEGKN--IIICLPTGSGKTRVAV 66 (216)
T ss_dssp HHHHHHHTTCC--EEEECSCHHHHHHHHH
T ss_pred HHHHHHhcCCC--EEEEcCCCCCHHHHHH
Confidence 34566777765 5678999999998763
No 130
>2chg_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATPase, ATP-binding, nucleotide-binding; HET: ANP; 2.1A {Archaeoglobus fulgidus}
Probab=55.79 E-value=4.3 Score=37.05 Aligned_cols=21 Identities=33% Similarity=0.289 Sum_probs=16.2
Q ss_pred cccceeEEEeeccCCCceEEe
Q psy9448 424 SGYNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 424 ~G~n~~i~ayGqtgsGKT~Tm 444 (583)
.+....++-||++|+|||+.+
T Consensus 35 ~~~~~~~ll~G~~G~GKT~l~ 55 (226)
T 2chg_A 35 RKNIPHLLFSGPPGTGKTATA 55 (226)
T ss_dssp TTCCCCEEEECSTTSSHHHHH
T ss_pred CCCCCeEEEECCCCCCHHHHH
Confidence 343345999999999999765
No 131
>1sxj_C Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=55.68 E-value=3.8 Score=41.21 Aligned_cols=28 Identities=36% Similarity=0.373 Sum_probs=18.9
Q ss_pred hHHHHhcccceeEEEeeccCCCceEEee
Q psy9448 418 LIDEVLSGYNCTVFAYGQTGTGKTFTME 445 (583)
Q Consensus 418 ~v~~~l~G~n~~i~ayGqtgsGKT~Tm~ 445 (583)
+-..+-.|--..++-||+.|+|||+++.
T Consensus 37 L~~~i~~g~~~~~ll~Gp~G~GKTtla~ 64 (340)
T 1sxj_C 37 VRKFVDEGKLPHLLFYGPPGTGKTSTIV 64 (340)
T ss_dssp HHHHHHTTCCCCEEEECSSSSSHHHHHH
T ss_pred HHHHHhcCCCceEEEECCCCCCHHHHHH
Confidence 3333444543347889999999997763
No 132
>1l8q_A Chromosomal replication initiator protein DNAA; AAA+, helix-turn-helix, nucleotide-binding, DNA binding, REP initiation, DNA binding protein; HET: ADP; 2.70A {Aquifex aeolicus} SCOP: a.4.12.2 c.37.1.20 PDB: 3r8f_A* 2hcb_A*
Probab=55.42 E-value=2.2 Score=42.61 Aligned_cols=19 Identities=42% Similarity=0.795 Sum_probs=16.1
Q ss_pred ceeEEEeeccCCCceEEee
Q psy9448 48 NCTVFAYGQTGTGKTFTME 66 (583)
Q Consensus 48 n~~i~ayGqtgSGKT~Tm~ 66 (583)
...++-||++|+|||+.+.
T Consensus 37 ~~~lll~G~~GtGKT~la~ 55 (324)
T 1l8q_A 37 YNPIFIYGSVGTGKTHLLQ 55 (324)
T ss_dssp CSSEEEECSSSSSHHHHHH
T ss_pred CCeEEEECCCCCcHHHHHH
Confidence 3568899999999998873
No 133
>1g8p_A Magnesium-chelatase 38 kDa subunit; parallel beta sheet, P-loop, rossman fold, AAA+, photosynthesis, metal transport; 2.10A {Rhodobacter capsulatus} SCOP: c.37.1.20 PDB: 2x31_G
Probab=55.36 E-value=3.8 Score=41.02 Aligned_cols=26 Identities=23% Similarity=0.359 Sum_probs=19.3
Q ss_pred HHHHhcccceeEEEeeccCCCceEEe
Q psy9448 40 IDEVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 40 v~~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
...++.+....|+-||++|+|||+..
T Consensus 37 ~~~~~~~~~~~vLl~G~~GtGKT~la 62 (350)
T 1g8p_A 37 LLTAVDPGIGGVLVFGDRGTGKSTAV 62 (350)
T ss_dssp HHHHHCGGGCCEEEECCGGGCTTHHH
T ss_pred HHHhhCCCCceEEEECCCCccHHHHH
Confidence 33444445556999999999999876
No 134
>1q0u_A Bstdead; DEAD protein, RNA binding protein; 1.85A {Geobacillus stearothermophilus} SCOP: c.37.1.19
Probab=55.26 E-value=3.4 Score=38.46 Aligned_cols=25 Identities=40% Similarity=0.515 Sum_probs=18.9
Q ss_pred hhHHHHhcccceeEEEeeccCCCceEE
Q psy9448 38 PLIDEVLSGYNCTVFAYGQTGTGKTFT 64 (583)
Q Consensus 38 plv~~~l~G~n~~i~ayGqtgSGKT~T 64 (583)
..+..+++|.|+ +..++||||||.+
T Consensus 33 ~~i~~~~~~~~~--lv~a~TGsGKT~~ 57 (219)
T 1q0u_A 33 RIIPGALRGESM--VGQSQTGTGKTHA 57 (219)
T ss_dssp HHHHHHHHTCCE--EEECCSSHHHHHH
T ss_pred HHHHHHhCCCCE--EEECCCCChHHHH
Confidence 345667778664 6678999999976
No 135
>4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=55.25 E-value=12 Score=39.14 Aligned_cols=45 Identities=31% Similarity=0.429 Sum_probs=31.0
Q ss_pred eeEEEeeccCCCceEE--------------eecccCCCCCCCcccCCCCccchhhhhHHHHHHhhcc
Q psy9448 49 CTVFAYGQTGTGKTFT--------------MEGEKSNDPSISWQDDPLSGIVPRAMNHLFDELRLLG 101 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~T--------------m~G~~~~~~~~~~~~~~~~Giipr~~~~lf~~~~~~~ 101 (583)
-.|+-||++|+|||.. +-|+.- .+...|--.+.++++|.......
T Consensus 207 rGiLL~GPPGtGKT~lakAiA~~~~~~~~~v~~~~l--------~~~~~Ge~e~~ir~lF~~A~~~a 265 (428)
T 4b4t_K 207 RGVLLYGPPGTGKTMLVKAVANSTKAAFIRVNGSEF--------VHKYLGEGPRMVRDVFRLARENA 265 (428)
T ss_dssp CEEEEESCTTTTHHHHHHHHHHHHTCEEEEEEGGGT--------CCSSCSHHHHHHHHHHHHHHHTC
T ss_pred ceEEEECCCCCCHHHHHHHHHHHhCCCeEEEecchh--------hccccchhHHHHHHHHHHHHHcC
Confidence 3499999999999944 333321 12234777889999998876543
No 136
>2qz4_A Paraplegin; AAA+, SPG7, protease, ADP, structural genomics, structural G consortium, SGC, ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.22A {Homo sapiens}
Probab=55.15 E-value=3.4 Score=39.44 Aligned_cols=19 Identities=26% Similarity=0.350 Sum_probs=16.0
Q ss_pred cceeEEEeeccCCCceEEe
Q psy9448 47 YNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 47 ~n~~i~ayGqtgSGKT~Tm 65 (583)
....|+-||++|+|||+..
T Consensus 38 ~~~~vll~G~~GtGKT~la 56 (262)
T 2qz4_A 38 VPKGALLLGPPGCGKTLLA 56 (262)
T ss_dssp CCCEEEEESCTTSSHHHHH
T ss_pred CCceEEEECCCCCCHHHHH
Confidence 3456899999999999876
No 137
>1njg_A DNA polymerase III subunit gamma; rossman-like fold, AAA+ ATPase domains, sensor 1, sensor 2, transferase; HET: DNA; 2.20A {Escherichia coli} SCOP: c.37.1.20 PDB: 1njf_A*
Probab=55.05 E-value=3.1 Score=38.51 Aligned_cols=17 Identities=29% Similarity=0.339 Sum_probs=15.0
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 49 CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm 65 (583)
..++-||++|+|||+.+
T Consensus 46 ~~~ll~G~~G~GKT~l~ 62 (250)
T 1njg_A 46 HAYLFSGTRGVGKTSIA 62 (250)
T ss_dssp SEEEEECSTTSCHHHHH
T ss_pred eEEEEECCCCCCHHHHH
Confidence 46899999999999876
No 138
>1vec_A ATP-dependent RNA helicase P54; DEAD-box protein, RNA binding protein; HET: TLA; 2.01A {Homo sapiens} SCOP: c.37.1.19
Probab=55.02 E-value=5.4 Score=36.48 Aligned_cols=25 Identities=36% Similarity=0.476 Sum_probs=18.5
Q ss_pred hHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 418 LIDEVLSGYNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 418 ~v~~~l~G~n~~i~ayGqtgsGKT~Tm 444 (583)
.+..+++|.+ ++..++||||||.+.
T Consensus 33 ~i~~~~~~~~--~lv~apTGsGKT~~~ 57 (206)
T 1vec_A 33 SIPIALSGRD--ILARAKNGTGKSGAY 57 (206)
T ss_dssp HHHHHHTTCC--EEEECCSSSTTHHHH
T ss_pred HHHHHccCCC--EEEECCCCCchHHHH
Confidence 4555667755 678899999999654
No 139
>3eiq_A Eukaryotic initiation factor 4A-I; PDCD4, anti-oncogene, apoptosis, cell cycle, nucleus, phosph RNA-binding, ATP-binding, helicase, hydrolase; 3.50A {Homo sapiens}
Probab=54.87 E-value=5 Score=41.02 Aligned_cols=26 Identities=46% Similarity=0.640 Sum_probs=20.8
Q ss_pred hhHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 38 PLIDEVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 38 plv~~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
..+..+++|.+ ++..++||||||.+.
T Consensus 69 ~~i~~~~~~~~--~lv~a~TGsGKT~~~ 94 (414)
T 3eiq_A 69 RAILPCIKGYD--VIAQAQSGTGKTATF 94 (414)
T ss_dssp HHHHHHHTTCC--EEECCCSCSSSHHHH
T ss_pred HHhHHHhCCCC--EEEECCCCCcccHHH
Confidence 45677788887 678899999999763
No 140
>2z4s_A Chromosomal replication initiator protein DNAA; AAA+ ATPase, domain III (ATPase domain), ATP-binding, cytoplasm, DNA replication; HET: ADP; 3.00A {Thermotoga maritima} PDB: 2z4r_A*
Probab=54.76 E-value=4.2 Score=42.83 Aligned_cols=50 Identities=20% Similarity=0.405 Sum_probs=27.9
Q ss_pred ccccccccccc-ccccccceeehhhhhhhHHHHhcccceeEEEeeccCCCceEEee
Q psy9448 391 ISKTFGFDRVF-SQESKQVDVYKYVVNPLIDEVLSGYNCTVFAYGQTGTGKTFTME 445 (583)
Q Consensus 391 ~~k~f~fD~vf-~~~~~q~~vy~~~~~~~v~~~l~G~n~~i~ayGqtgsGKT~Tm~ 445 (583)
....|+||... ++ ++...+..+ ..+.+. .|..-.++-||++|+|||+.+.
T Consensus 98 l~~~~tfd~fv~g~--~n~~a~~~~-~~~a~~--~~~~~~lll~Gp~G~GKTtLa~ 148 (440)
T 2z4s_A 98 LNPDYTFENFVVGP--GNSFAYHAA-LEVAKH--PGRYNPLFIYGGVGLGKTHLLQ 148 (440)
T ss_dssp CCTTCSGGGCCCCT--TTHHHHHHH-HHHHHS--TTSSCCEEEECSSSSSHHHHHH
T ss_pred CCCCCChhhcCCCC--chHHHHHHH-HHHHhC--CCCCCeEEEECCCCCCHHHHHH
Confidence 34568888654 33 222222221 222221 1213468999999999998763
No 141
>3fmp_B ATP-dependent RNA helicase DDX19B; nuclear porin, nuclear pore complex, nucleocytoplasmic trans mRNA export, protein interaction, beta-propeller; HET: ADP; 3.19A {Homo sapiens}
Probab=54.70 E-value=5.1 Score=42.26 Aligned_cols=26 Identities=31% Similarity=0.333 Sum_probs=20.5
Q ss_pred hHHHHhcccceeEEEeeccCCCceEE
Q psy9448 39 LIDEVLSGYNCTVFAYGQTGTGKTFT 64 (583)
Q Consensus 39 lv~~~l~G~n~~i~ayGqtgSGKT~T 64 (583)
.+..++.|.+..++..|+||||||..
T Consensus 122 ai~~il~~~~~~~l~~a~TGsGKT~~ 147 (479)
T 3fmp_B 122 ALPLMLAEPPQNLIAQSQSGTGKTAA 147 (479)
T ss_dssp HHHHHTSBSCCEEEEECCSSSSHHHH
T ss_pred HHHHHHcCCCCcEEEEcCCCCchhHH
Confidence 35556677667789999999999976
No 142
>2gxq_A Heat resistant RNA dependent ATPase; RNA helicase, atomic resolution, AMP complex, ribosome biogenesis, thermophilic, hydrolase; HET: AMP; 1.20A {Thermus thermophilus HB27} PDB: 2gxs_A* 2gxu_A 3mwj_A 3mwk_A* 3mwl_A* 3nbf_A* 3nej_A
Probab=54.67 E-value=5.1 Score=36.62 Aligned_cols=24 Identities=33% Similarity=0.545 Sum_probs=18.3
Q ss_pred hHHHHhcccceeEEEeeccCCCceEE
Q psy9448 418 LIDEVLSGYNCTVFAYGQTGTGKTFT 443 (583)
Q Consensus 418 ~v~~~l~G~n~~i~ayGqtgsGKT~T 443 (583)
.+..+++|.+ ++..++||||||.+
T Consensus 31 ~i~~~~~~~~--~li~~~TGsGKT~~ 54 (207)
T 2gxq_A 31 ALPLALEGKD--LIGQARTGTGKTLA 54 (207)
T ss_dssp HHHHHHTTCC--EEEECCTTSCHHHH
T ss_pred HHHHHcCCCC--EEEECCCCChHHHH
Confidence 4455667765 67789999999976
No 143
>4b4t_M 26S protease regulatory subunit 6A; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=54.13 E-value=2.2 Score=44.94 Aligned_cols=48 Identities=25% Similarity=0.324 Sum_probs=27.9
Q ss_pred ehhhcccCCceEEEeehhhhhhHH-HHhc--cc--ceeEEEeeccCCCceEEe
Q psy9448 18 MFLVCIFYTTIVDVYKYVVNPLID-EVLS--GY--NCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 18 ~D~Vf~~~~tq~~vy~~~~~plv~-~~l~--G~--n~~i~ayGqtgSGKT~Tm 65 (583)
||.|-+.+..-+++.+.+..|+.. ..+. |. --.|+-||++|+|||.+.
T Consensus 180 ~~digGl~~~k~~l~e~v~~pl~~pe~f~~~g~~~prGvLLyGPPGTGKTllA 232 (434)
T 4b4t_M 180 YSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLA 232 (434)
T ss_dssp GGGSCSCHHHHHHHHHHTHHHHHCSHHHHHHCCCCCCEEEEESCTTSSHHHHH
T ss_pred hHhcCcHHHHHHHHHHHHHHHHhCHHHHHhCCCCCCCeeEEECcCCCCHHHHH
Confidence 444444444334445555555542 3333 32 346899999999998654
No 144
>2oap_1 GSPE-2, type II secretion system protein; hexameric ATPase, hydrolase; HET: ANP; 2.95A {Archaeoglobus fulgidus} PDB: 2oaq_1
Probab=53.88 E-value=3.7 Score=44.25 Aligned_cols=20 Identities=30% Similarity=0.566 Sum_probs=16.1
Q ss_pred cccceeEEEeeccCCCceEEee
Q psy9448 45 SGYNCTVFAYGQTGTGKTFTME 66 (583)
Q Consensus 45 ~G~n~~i~ayGqtgSGKT~Tm~ 66 (583)
.|.+ +...|+||||||.+|-
T Consensus 259 ~g~~--i~I~GptGSGKTTlL~ 278 (511)
T 2oap_1 259 HKFS--AIVVGETASGKTTTLN 278 (511)
T ss_dssp TTCC--EEEEESTTSSHHHHHH
T ss_pred CCCE--EEEECCCCCCHHHHHH
Confidence 5655 6778999999999874
No 145
>4b4t_M 26S protease regulatory subunit 6A; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=53.86 E-value=4 Score=42.95 Aligned_cols=49 Identities=20% Similarity=0.326 Sum_probs=33.4
Q ss_pred cccccccccccccceeehhhhhhhHH-HHhccc----ceeEEEeeccCCCceEE
Q psy9448 395 FGFDRVFSQESKQVDVYKYVVNPLID-EVLSGY----NCTVFAYGQTGTGKTFT 443 (583)
Q Consensus 395 f~fD~vf~~~~~q~~vy~~~~~~~v~-~~l~G~----n~~i~ayGqtgsGKT~T 443 (583)
-+||-|-+-+.--+++.+.++.|+.. ..+.++ .-.|+-||+.|+|||..
T Consensus 178 ~t~~digGl~~~k~~l~e~v~~pl~~pe~f~~~g~~~prGvLLyGPPGTGKTll 231 (434)
T 4b4t_M 178 ETYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLL 231 (434)
T ss_dssp CCGGGSCSCHHHHHHHHHHTHHHHHCSHHHHHHCCCCCCEEEEESCTTSSHHHH
T ss_pred CChHhcCcHHHHHHHHHHHHHHHHhCHHHHHhCCCCCCCeeEEECcCCCCHHHH
Confidence 46777777766656666666666653 344422 35689999999999854
No 146
>4b4t_J 26S protease regulatory subunit 8 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=53.85 E-value=12 Score=38.80 Aligned_cols=76 Identities=25% Similarity=0.314 Sum_probs=44.8
Q ss_pred ehhhcccCCceEEEeehhhhhhHH-HHhc--cc--ceeEEEeeccCCCceEE--------------eecccCCCCCCCcc
Q psy9448 18 MFLVCIFYTTIVDVYKYVVNPLID-EVLS--GY--NCTVFAYGQTGTGKTFT--------------MEGEKSNDPSISWQ 78 (583)
Q Consensus 18 ~D~Vf~~~~tq~~vy~~~~~plv~-~~l~--G~--n~~i~ayGqtgSGKT~T--------------m~G~~~~~~~~~~~ 78 (583)
||.|-+.+..-+++-+.+.-|+.. .++. |. .-.|+-||++|+|||.. +-|+.-
T Consensus 147 ~~dIgGl~~~k~~l~e~v~~Pl~~pe~f~~~gi~~prGvLL~GPPGTGKTllAkAiA~e~~~~f~~v~~s~l-------- 218 (405)
T 4b4t_J 147 YDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTDCKFIRVSGAEL-------- 218 (405)
T ss_dssp GGGSCSCHHHHHHHHHHTHHHHHCHHHHHHHTCCCCCCEEEESCSSSSHHHHHHHHHHHHTCEEEEEEGGGG--------
T ss_pred HHHhCCHHHHHHHHHHHHHHHHhCHHHHHhCCCCCCCceEEeCCCCCCHHHHHHHHHHhhCCCceEEEhHHh--------
Confidence 444444444444455555555543 3343 33 24699999999999954 333321
Q ss_pred cCCCCccchhhhhHHHHHHhhcc
Q psy9448 79 DDPLSGIVPRAMNHLFDELRLLG 101 (583)
Q Consensus 79 ~~~~~Giipr~~~~lf~~~~~~~ 101 (583)
.....|--.+.++++|.......
T Consensus 219 ~sk~vGese~~vr~lF~~Ar~~a 241 (405)
T 4b4t_J 219 VQKYIGEGSRMVRELFVMAREHA 241 (405)
T ss_dssp SCSSTTHHHHHHHHHHHHHHHTC
T ss_pred hccccchHHHHHHHHHHHHHHhC
Confidence 11223667888999998877643
No 147
>1fnn_A CDC6P, cell division control protein 6; ORC1, AAA protein, DNA replication initation factor, cell cycle control factor; HET: ADP; 2.00A {Pyrobaculum aerophilum} SCOP: a.4.5.11 c.37.1.20
Probab=53.76 E-value=4.3 Score=41.20 Aligned_cols=27 Identities=33% Similarity=0.457 Sum_probs=18.9
Q ss_pred hHHHHhcccc-e--eEEEeeccCCCceEEe
Q psy9448 418 LIDEVLSGYN-C--TVFAYGQTGTGKTFTM 444 (583)
Q Consensus 418 ~v~~~l~G~n-~--~i~ayGqtgsGKT~Tm 444 (583)
.+...+.|.. . .++-||++|+|||..+
T Consensus 32 ~l~~~~~~~~~~~~~~li~G~~G~GKTtl~ 61 (389)
T 1fnn_A 32 LLGNWLRNPGHHYPRATLLGRPGTGKTVTL 61 (389)
T ss_dssp HHHHHHHSTTSSCCEEEEECCTTSSHHHHH
T ss_pred HHHHHHcCCCCCCCeEEEECCCCCCHHHHH
Confidence 3444444433 4 6899999999999765
No 148
>1xwi_A SKD1 protein; VPS4B, AAA ATPase, protein transport; 2.80A {Homo sapiens}
Probab=53.72 E-value=2.9 Score=42.04 Aligned_cols=50 Identities=20% Similarity=0.361 Sum_probs=30.0
Q ss_pred cccccccccccccceeehhhhhhhHH-HHhccc---ceeEEEeeccCCCceEEe
Q psy9448 395 FGFDRVFSQESKQVDVYKYVVNPLID-EVLSGY---NCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 395 f~fD~vf~~~~~q~~vy~~~~~~~v~-~~l~G~---n~~i~ayGqtgsGKT~Tm 444 (583)
.+||.+.+.+.--+.+-+.+..|+-. .++.|. .-.|+-||++|+|||+..
T Consensus 9 ~~~~di~G~~~~k~~l~~~v~~p~~~~~~~~~~~~~~~~iLL~GppGtGKT~la 62 (322)
T 1xwi_A 9 VKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLA 62 (322)
T ss_dssp CCGGGSCSCHHHHHHHHHHHHHHHHCGGGSCTTCCCCSEEEEESSSSSCHHHHH
T ss_pred CCHHHhcCHHHHHHHHHHHHHHHHhCHHHHhCCCCCCceEEEECCCCccHHHHH
Confidence 45677776654444444444444332 233332 246899999999999765
No 149
>1fnn_A CDC6P, cell division control protein 6; ORC1, AAA protein, DNA replication initation factor, cell cycle control factor; HET: ADP; 2.00A {Pyrobaculum aerophilum} SCOP: a.4.5.11 c.37.1.20
Probab=53.62 E-value=3.2 Score=42.10 Aligned_cols=27 Identities=33% Similarity=0.457 Sum_probs=19.5
Q ss_pred hHHHHhcccc-e--eEEEeeccCCCceEEe
Q psy9448 39 LIDEVLSGYN-C--TVFAYGQTGTGKTFTM 65 (583)
Q Consensus 39 lv~~~l~G~n-~--~i~ayGqtgSGKT~Tm 65 (583)
.+...+.|.. . .++-||++|+|||+++
T Consensus 32 ~l~~~~~~~~~~~~~~li~G~~G~GKTtl~ 61 (389)
T 1fnn_A 32 LLGNWLRNPGHHYPRATLLGRPGTGKTVTL 61 (389)
T ss_dssp HHHHHHHSTTSSCCEEEEECCTTSSHHHHH
T ss_pred HHHHHHcCCCCCCCeEEEECCCCCCHHHHH
Confidence 3444444433 4 6899999999999877
No 150
>3bor_A Human initiation factor 4A-II; translation initiation, DEAD BOX, structural genomics, helic binding, HOST-virus interaction, hydrolase; 1.85A {Homo sapiens} PDB: 2g9n_A*
Probab=53.61 E-value=3.7 Score=38.93 Aligned_cols=25 Identities=48% Similarity=0.680 Sum_probs=19.2
Q ss_pred hHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 418 LIDEVLSGYNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 418 ~v~~~l~G~n~~i~ayGqtgsGKT~Tm 444 (583)
.+..+++|.+ ++..++||||||.+.
T Consensus 60 ai~~i~~~~~--~li~apTGsGKT~~~ 84 (237)
T 3bor_A 60 AIIPCIKGYD--VIAQAQSGTGKTATF 84 (237)
T ss_dssp HHHHHHTTCC--EEECCCSSHHHHHHH
T ss_pred HHHHHhCCCC--EEEECCCCCcHHHHH
Confidence 4555677766 688999999999763
No 151
>2c9o_A RUVB-like 1; hexameric helicase, AAA+-ATPase, ATP-binding, chromatin regulator, growth regulation, hydrolase, nuclear protein, DNA recombination; HET: ADP; 2.2A {Homo sapiens} PDB: 2xsz_A*
Probab=53.23 E-value=4.9 Score=42.42 Aligned_cols=29 Identities=28% Similarity=0.303 Sum_probs=21.4
Q ss_pred hhhHHHHhcccc--eeEEEeeccCCCceEEe
Q psy9448 37 NPLIDEVLSGYN--CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 37 ~plv~~~l~G~n--~~i~ayGqtgSGKT~Tm 65 (583)
..+++.+..|.. ..++-||++|+|||+..
T Consensus 50 ~~~~~~~~~~~~~~~~iLl~GppGtGKT~la 80 (456)
T 2c9o_A 50 GVIVELIKSKKMAGRAVLLAGPPGTGKTALA 80 (456)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSSHHHHH
T ss_pred HHHHHHHHhCCCCCCeEEEECCCcCCHHHHH
Confidence 345666666654 36888999999999766
No 152
>3fmo_B ATP-dependent RNA helicase DDX19B; nuclear porin, nuclear pore complex, nucleocytoplasmic trans mRNA export, protein interaction, beta-propeller; HET: ADP; 2.51A {Homo sapiens}
Probab=53.00 E-value=5.4 Score=39.53 Aligned_cols=26 Identities=31% Similarity=0.333 Sum_probs=20.4
Q ss_pred hHHHHhcccceeEEEeeccCCCceEE
Q psy9448 418 LIDEVLSGYNCTVFAYGQTGTGKTFT 443 (583)
Q Consensus 418 ~v~~~l~G~n~~i~ayGqtgsGKT~T 443 (583)
.+..++.|-.-.+++.++||||||.+
T Consensus 122 ai~~il~~~~~~~l~~a~TGsGKT~a 147 (300)
T 3fmo_B 122 ALPLMLAEPPQNLIAQSQSGTGKTAA 147 (300)
T ss_dssp HHHHHTSSSCCCEEEECCTTSSHHHH
T ss_pred HHHHHHcCCCCeEEEECCCCCCccHH
Confidence 45666777555689999999999976
No 153
>4b3f_X DNA-binding protein smubp-2; hydrolase, helicase; 2.50A {Homo sapiens} PDB: 4b3g_A
Probab=52.86 E-value=3.6 Score=45.59 Aligned_cols=27 Identities=33% Similarity=0.287 Sum_probs=19.2
Q ss_pred hHHHHhcccceeEEEeeccCCCceEEee
Q psy9448 39 LIDEVLSGYNCTVFAYGQTGTGKTFTME 66 (583)
Q Consensus 39 lv~~~l~G~n~~i~ayGqtgSGKT~Tm~ 66 (583)
.|..++.....+ +-.|+.|||||+|+.
T Consensus 197 AV~~al~~~~~~-lI~GPPGTGKT~ti~ 223 (646)
T 4b3f_X 197 AVLFALSQKELA-IIHGPPGTGKTTTVV 223 (646)
T ss_dssp HHHHHHHCSSEE-EEECCTTSCHHHHHH
T ss_pred HHHHHhcCCCce-EEECCCCCCHHHHHH
Confidence 456666443334 567999999999984
No 154
>3dkp_A Probable ATP-dependent RNA helicase DDX52; DEAD, ADP, structural genomics, structural GEN consortium, SGC, rRNA, ATP-binding, hydrolase; HET: ADP; 2.10A {Homo sapiens}
Probab=52.81 E-value=5.6 Score=37.64 Aligned_cols=24 Identities=38% Similarity=0.576 Sum_probs=19.0
Q ss_pred hHHHHhcccceeEEEeeccCCCceEE
Q psy9448 418 LIDEVLSGYNCTVFAYGQTGTGKTFT 443 (583)
Q Consensus 418 ~v~~~l~G~n~~i~ayGqtgsGKT~T 443 (583)
.+..+++|.+ ++..++||||||.+
T Consensus 59 ~i~~~~~~~~--~l~~a~TGsGKT~~ 82 (245)
T 3dkp_A 59 AIPVMLHGRE--LLASAPTGSGKTLA 82 (245)
T ss_dssp HHHHHHTTCC--EEEECCTTSCHHHH
T ss_pred HHHHHhCCCC--EEEECCCCCcHHHH
Confidence 4556677876 68889999999976
No 155
>3co5_A Putative two-component system transcriptional RES regulator; structural genomics, APC89341.1; 2.40A {Neisseria gonorrhoeae}
Probab=52.73 E-value=3.4 Score=35.87 Aligned_cols=21 Identities=19% Similarity=0.188 Sum_probs=16.3
Q ss_pred cceeEEEeeccCCCceEEeec
Q psy9448 426 YNCTVFAYGQTGTGKTFTMEG 446 (583)
Q Consensus 426 ~n~~i~ayGqtgsGKT~Tm~G 446 (583)
.+..|+-||++|+|||+....
T Consensus 26 ~~~~vll~G~~GtGKt~lA~~ 46 (143)
T 3co5_A 26 RTSPVFLTGEAGSPFETVARY 46 (143)
T ss_dssp CSSCEEEEEETTCCHHHHHGG
T ss_pred CCCcEEEECCCCccHHHHHHH
Confidence 345688899999999976543
No 156
>1p9r_A General secretion pathway protein E; bacterial type II secretion system cytoplasmic protein - GSPE, putative ATPase/ ATP binding protein; 2.50A {Vibrio cholerae} SCOP: c.37.1.11 PDB: 1p9w_A*
Probab=52.66 E-value=4 Score=42.77 Aligned_cols=29 Identities=21% Similarity=0.330 Sum_probs=21.7
Q ss_pred hhHHHHhcccceeEEEeeccCCCceEEee
Q psy9448 417 PLIDEVLSGYNCTVFAYGQTGTGKTFTME 445 (583)
Q Consensus 417 ~~v~~~l~G~n~~i~ayGqtgsGKT~Tm~ 445 (583)
+.+..++..-...+.-.|+||||||.+|.
T Consensus 157 ~~L~~l~~~~ggii~I~GpnGSGKTTlL~ 185 (418)
T 1p9r_A 157 DNFRRLIKRPHGIILVTGPTGSGKSTTLY 185 (418)
T ss_dssp HHHHHHHTSSSEEEEEECSTTSCHHHHHH
T ss_pred HHHHHHHHhcCCeEEEECCCCCCHHHHHH
Confidence 35555565556678899999999997764
No 157
>1xwi_A SKD1 protein; VPS4B, AAA ATPase, protein transport; 2.80A {Homo sapiens}
Probab=52.39 E-value=1.7 Score=43.83 Aligned_cols=17 Identities=29% Similarity=0.700 Sum_probs=14.9
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 49 CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm 65 (583)
..|+-||++|+|||+..
T Consensus 46 ~~iLL~GppGtGKT~la 62 (322)
T 1xwi_A 46 RGILLFGPPGTGKSYLA 62 (322)
T ss_dssp SEEEEESSSSSCHHHHH
T ss_pred ceEEEECCCCccHHHHH
Confidence 46899999999999876
No 158
>3jvv_A Twitching mobility protein; hexameric P-loop ATPase, secretion ATPase, ATP-binding, FIMB nucleotide-binding, transport; HET: ACP CIT; 2.60A {Pseudomonas aeruginosa} PDB: 3jvu_A*
Probab=52.26 E-value=3.8 Score=41.95 Aligned_cols=28 Identities=29% Similarity=0.372 Sum_probs=20.4
Q ss_pred hHHHHhcccceeEEEeeccCCCceEEee
Q psy9448 418 LIDEVLSGYNCTVFAYGQTGTGKTFTME 445 (583)
Q Consensus 418 ~v~~~l~G~n~~i~ayGqtgsGKT~Tm~ 445 (583)
.+..++..-...+.-.|+||||||.++.
T Consensus 114 ~l~~l~~~~~g~i~I~GptGSGKTTlL~ 141 (356)
T 3jvv_A 114 VFKRVSDVPRGLVLVTGPTGSGKSTTLA 141 (356)
T ss_dssp HHHHHHHCSSEEEEEECSTTSCHHHHHH
T ss_pred HHHHHHhCCCCEEEEECCCCCCHHHHHH
Confidence 4445554455578888999999997774
No 159
>3n70_A Transport activator; sigma-54, ntpase, PSI, MCSG, structural genomics, center for structural genomics; 2.80A {Escherichia coli}
Probab=52.26 E-value=3.9 Score=35.58 Aligned_cols=20 Identities=30% Similarity=0.549 Sum_probs=16.2
Q ss_pred ccceeEEEeeccCCCceEEe
Q psy9448 425 GYNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 425 G~n~~i~ayGqtgsGKT~Tm 444 (583)
..+..|+-||++|+|||+..
T Consensus 22 ~~~~~vll~G~~GtGKt~lA 41 (145)
T 3n70_A 22 ETDIAVWLYGAPGTGRMTGA 41 (145)
T ss_dssp TCCSCEEEESSTTSSHHHHH
T ss_pred CCCCCEEEECCCCCCHHHHH
Confidence 45567899999999999554
No 160
>2qby_B CDC6 homolog 3, cell division control protein 6 homolog 3; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=51.85 E-value=4.4 Score=41.12 Aligned_cols=27 Identities=33% Similarity=0.428 Sum_probs=19.6
Q ss_pred hHHHHhcc-cceeEEEeeccCCCceEEe
Q psy9448 39 LIDEVLSG-YNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 39 lv~~~l~G-~n~~i~ayGqtgSGKT~Tm 65 (583)
.+..++.| ....++-||++|+|||+.+
T Consensus 35 ~l~~~~~~~~~~~vll~G~~G~GKT~la 62 (384)
T 2qby_B 35 AIRYFVKNEVKFSNLFLGLTGTGKTFVS 62 (384)
T ss_dssp HHHHHHTTCCCCEEEEEECTTSSHHHHH
T ss_pred HHHHHHcCCCCCcEEEECCCCCCHHHHH
Confidence 34444433 3457999999999999876
No 161
>3uk6_A RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding, hydrolase; HET: ADP; 2.95A {Homo sapiens} PDB: 2xsz_D*
Probab=51.62 E-value=5.6 Score=40.19 Aligned_cols=46 Identities=22% Similarity=0.226 Sum_probs=28.2
Q ss_pred cccccccccccccceeehhhhhhhHHHHhcccce--eEEEeeccCCCceEEee
Q psy9448 395 FGFDRVFSQESKQVDVYKYVVNPLIDEVLSGYNC--TVFAYGQTGTGKTFTME 445 (583)
Q Consensus 395 f~fD~vf~~~~~q~~vy~~~~~~~v~~~l~G~n~--~i~ayGqtgsGKT~Tm~ 445 (583)
+.||.+.+.+ .+... +..+++.+..|... .++-||++|+|||+...
T Consensus 41 ~~~~~ivG~~----~~~~~-l~~l~~~~~~~~~~~~~vLl~GppGtGKT~la~ 88 (368)
T 3uk6_A 41 QASQGMVGQL----AARRA-AGVVLEMIREGKIAGRAVLIAGQPGTGKTAIAM 88 (368)
T ss_dssp SEETTEESCH----HHHHH-HHHHHHHHHTTCCTTCEEEEEESTTSSHHHHHH
T ss_pred cchhhccChH----HHHHH-HHHHHHHHHcCCCCCCEEEEECCCCCCHHHHHH
Confidence 4466555543 22221 23345555566654 89999999999997653
No 162
>2fz4_A DNA repair protein RAD25; RECA-like domain, DNA damage recognition domain, DNA binding; HET: DNA; 2.40A {Archaeoglobus fulgidus} SCOP: c.37.1.19
Probab=51.53 E-value=5.2 Score=38.12 Aligned_cols=26 Identities=23% Similarity=0.167 Sum_probs=19.4
Q ss_pred hHHHHhcccceeEEEeeccCCCceEEee
Q psy9448 39 LIDEVLSGYNCTVFAYGQTGTGKTFTME 66 (583)
Q Consensus 39 lv~~~l~G~n~~i~ayGqtgSGKT~Tm~ 66 (583)
.+..++++.+ ++..|+||+|||+...
T Consensus 101 ai~~~~~~~~--~ll~~~tG~GKT~~a~ 126 (237)
T 2fz4_A 101 ALERWLVDKR--GCIVLPTGSGKTHVAM 126 (237)
T ss_dssp HHHHHTTTSE--EEEEESSSTTHHHHHH
T ss_pred HHHHHHhCCC--EEEEeCCCCCHHHHHH
Confidence 4556667765 6677899999998764
No 163
>1iy2_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 3.20A {Thermus thermophilus} SCOP: c.37.1.20
Probab=51.47 E-value=2.8 Score=40.94 Aligned_cols=16 Identities=38% Similarity=0.528 Sum_probs=14.4
Q ss_pred eEEEeeccCCCceEEe
Q psy9448 50 TVFAYGQTGTGKTFTM 65 (583)
Q Consensus 50 ~i~ayGqtgSGKT~Tm 65 (583)
.++-||++|||||+.+
T Consensus 75 gvll~Gp~GtGKTtl~ 90 (278)
T 1iy2_A 75 GVLLVGPPGVGKTHLA 90 (278)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred eEEEECCCcChHHHHH
Confidence 3899999999999877
No 164
>1tue_A Replication protein E1; helicase, replication, E1E2 complex, AAA+ protein; 2.10A {Human papillomavirus type 18} SCOP: c.37.1.20
Probab=51.40 E-value=4.6 Score=38.06 Aligned_cols=26 Identities=23% Similarity=0.372 Sum_probs=19.1
Q ss_pred HHHHhcccc--eeEEEeeccCCCceEEe
Q psy9448 419 IDEVLSGYN--CTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 419 v~~~l~G~n--~~i~ayGqtgsGKT~Tm 444 (583)
++.++.|.. -+++-||+.|+|||+..
T Consensus 48 l~~~~~~iPkkn~ili~GPPGtGKTt~a 75 (212)
T 1tue_A 48 LKSFLKGTPKKNCLVFCGPANTGKSYFG 75 (212)
T ss_dssp HHHHHHTCTTCSEEEEESCGGGCHHHHH
T ss_pred HHHHHhcCCcccEEEEECCCCCCHHHHH
Confidence 444555643 46999999999999664
No 165
>1iqp_A RFCS; clamp loader, extended AAA-ATPase domain, complex with ADP, replication; HET: ADP; 2.80A {Pyrococcus furiosus} SCOP: a.80.1.1 c.37.1.20
Probab=51.33 E-value=3.9 Score=40.34 Aligned_cols=27 Identities=30% Similarity=0.297 Sum_probs=19.0
Q ss_pred hHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 39 LIDEVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 39 lv~~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
+...+-.|....++-||++|+|||++.
T Consensus 37 l~~~l~~~~~~~~ll~G~~G~GKT~la 63 (327)
T 1iqp_A 37 LKHYVKTGSMPHLLFAGPPGVGKTTAA 63 (327)
T ss_dssp HHHHHHHTCCCEEEEESCTTSSHHHHH
T ss_pred HHHHHHcCCCCeEEEECcCCCCHHHHH
Confidence 333333454445899999999999876
No 166
>3ly5_A ATP-dependent RNA helicase DDX18; alpha-beta, structural genomics, structural genomics consort ATP-binding, hydrolase, nucleotide-binding, RNA-B; 2.80A {Homo sapiens}
Probab=51.25 E-value=4.5 Score=39.07 Aligned_cols=25 Identities=36% Similarity=0.600 Sum_probs=19.0
Q ss_pred hhHHHHhcccceeEEEeeccCCCceEE
Q psy9448 417 PLIDEVLSGYNCTVFAYGQTGTGKTFT 443 (583)
Q Consensus 417 ~~v~~~l~G~n~~i~ayGqtgsGKT~T 443 (583)
..+..++.|.+ ++..++||||||.+
T Consensus 83 ~~i~~~~~~~~--~lv~a~TGsGKT~~ 107 (262)
T 3ly5_A 83 KSIRPLLEGRD--LLAAAKTGSGKTLA 107 (262)
T ss_dssp HHHHHHHHTCC--CEECCCTTSCHHHH
T ss_pred HHHHHHhCCCc--EEEEccCCCCchHH
Confidence 34555677765 68899999999965
No 167
>3fht_A ATP-dependent RNA helicase DDX19B; DBP5, DEAD-box helicase, RNA dependent ATPase, mRNA export, nucleocytoplasmic transport, NUP214, CAN; HET: ANP; 2.20A {Homo sapiens} PDB: 3ews_A* 3g0h_A* 3fhc_B
Probab=50.81 E-value=6.3 Score=40.15 Aligned_cols=28 Identities=29% Similarity=0.318 Sum_probs=21.7
Q ss_pred hhHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 38 PLIDEVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 38 plv~~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
..+..+++|.+..++..++||||||.+.
T Consensus 54 ~~i~~~~~~~~~~~lv~apTGsGKT~~~ 81 (412)
T 3fht_A 54 NALPLMLAEPPQNLIAQSQSGTGKTAAF 81 (412)
T ss_dssp HHHHHHHSSSCCCEEEECCTTSCHHHHH
T ss_pred HHHHHHhcCCCCeEEEECCCCchHHHHH
Confidence 4566777775566788899999999763
No 168
>3h4m_A Proteasome-activating nucleotidase; ATPase, PAN, ATP-binding, nucleotide-binding, HY; HET: ADP; 3.11A {Methanocaldococcus jannaschii}
Probab=50.76 E-value=5.4 Score=38.69 Aligned_cols=19 Identities=37% Similarity=0.557 Sum_probs=15.9
Q ss_pred cceeEEEeeccCCCceEEe
Q psy9448 47 YNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 47 ~n~~i~ayGqtgSGKT~Tm 65 (583)
....++-||++|+|||+.+
T Consensus 50 ~~~~~ll~G~~GtGKT~la 68 (285)
T 3h4m_A 50 PPKGILLYGPPGTGKTLLA 68 (285)
T ss_dssp CCSEEEEESSSSSSHHHHH
T ss_pred CCCeEEEECCCCCcHHHHH
Confidence 3456899999999999876
No 169
>2r62_A Cell division protease FTSH homolog; ATPase domain, ATP-binding, cell CELL division, hydrolase, membrane, metal-binding; 3.30A {Helicobacter pylori} PDB: 2r65_A*
Probab=50.40 E-value=1.8 Score=41.79 Aligned_cols=18 Identities=39% Similarity=0.486 Sum_probs=15.2
Q ss_pred ceeEEEeeccCCCceEEe
Q psy9448 48 NCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 48 n~~i~ayGqtgSGKT~Tm 65 (583)
...|+-||++|+|||+.+
T Consensus 44 ~~~vll~G~~GtGKT~la 61 (268)
T 2r62_A 44 PKGVLLVGPPGTGKTLLA 61 (268)
T ss_dssp CSCCCCBCSSCSSHHHHH
T ss_pred CceEEEECCCCCcHHHHH
Confidence 345889999999999876
No 170
>1lv7_A FTSH; alpha/beta domain, four helix bundle, hydrolase; 1.50A {Escherichia coli} SCOP: c.37.1.20
Probab=50.39 E-value=4.2 Score=38.99 Aligned_cols=18 Identities=39% Similarity=0.495 Sum_probs=15.4
Q ss_pred ceeEEEeeccCCCceEEe
Q psy9448 48 NCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 48 n~~i~ayGqtgSGKT~Tm 65 (583)
...|+-||++|+|||+.+
T Consensus 45 ~~~vll~G~~GtGKT~la 62 (257)
T 1lv7_A 45 PKGVLMVGPPGTGKTLLA 62 (257)
T ss_dssp CCEEEEECCTTSCHHHHH
T ss_pred CCeEEEECcCCCCHHHHH
Confidence 446899999999999776
No 171
>1lv7_A FTSH; alpha/beta domain, four helix bundle, hydrolase; 1.50A {Escherichia coli} SCOP: c.37.1.20
Probab=50.28 E-value=3.8 Score=39.31 Aligned_cols=50 Identities=24% Similarity=0.270 Sum_probs=27.7
Q ss_pred ccccccccccccccceeehhhhhhhHH-HHhc----ccceeEEEeeccCCCceEEe
Q psy9448 394 TFGFDRVFSQESKQVDVYKYVVNPLID-EVLS----GYNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 394 ~f~fD~vf~~~~~q~~vy~~~~~~~v~-~~l~----G~n~~i~ayGqtgsGKT~Tm 444 (583)
...||.+.+.+...+.+.+. +..+.. ..+. .....++-||++|+|||+.+
T Consensus 8 ~~~~~~i~G~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~vll~G~~GtGKT~la 62 (257)
T 1lv7_A 8 KTTFADVAGCDEAKEEVAEL-VEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLA 62 (257)
T ss_dssp CCCGGGSCSCHHHHHHTHHH-HHHHHCGGGC-----CCCCEEEEECCTTSCHHHHH
T ss_pred CCCHHHhcCcHHHHHHHHHH-HHHHhCHHHHHHcCCCCCCeEEEECcCCCCHHHHH
Confidence 46778777765444333322 121110 0111 22446899999999999654
No 172
>1ofh_A ATP-dependent HSL protease ATP-binding subunit HSLU; chaperone, hydrolase, ATP-binding; HET: ADP; 2.5A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1ofi_A*
Probab=50.19 E-value=5.2 Score=39.09 Aligned_cols=18 Identities=33% Similarity=0.429 Sum_probs=15.5
Q ss_pred ceeEEEeeccCCCceEEe
Q psy9448 48 NCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 48 n~~i~ayGqtgSGKT~Tm 65 (583)
...++-||++|+|||+..
T Consensus 50 ~~~vll~G~~GtGKT~la 67 (310)
T 1ofh_A 50 PKNILMIGPTGVGKTEIA 67 (310)
T ss_dssp CCCEEEECCTTSSHHHHH
T ss_pred CceEEEECCCCCCHHHHH
Confidence 457889999999999876
No 173
>4etp_B Spindle POLE BODY-associated protein VIK1; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=49.93 E-value=12 Score=37.31 Aligned_cols=87 Identities=15% Similarity=0.177 Sum_probs=61.1
Q ss_pred ccccccccccccccc--ccceeehhhhhhhHHHHh-cccceeEEEeeccCCCceEEeeccccCCCCcccccCCCCccchh
Q psy9448 391 ISKTFGFDRVFSQES--KQVDVYKYVVNPLIDEVL-SGYNCTVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPR 467 (583)
Q Consensus 391 ~~k~f~fD~vf~~~~--~q~~vy~~~~~~~v~~~l-~G~n~~i~ayGqtgsGKT~Tm~G~~~~~~~~~~~~~~~~Giipr 467 (583)
..+.|.|++|++.+. .+..+|+++ +..++-|+ .+.|++++.-|+.- + +.
T Consensus 90 ~~~~y~FnRiIp~~~~~e~~~l~qE~-q~y~DmcL~~~~NfslIsis~~~------------w---------------~~ 141 (333)
T 4etp_B 90 SEHVYKFNRVIPHLKVSEDCFFTQEY-SVYHDMALNQKKNFNLISLSTTP------------H---------------GS 141 (333)
T ss_dssp CCCEEECSEEEETTTCCHHHHHHHTT-HHHHHHHHHTTCCEEEEEEESSC------------C---------------CH
T ss_pred CcceEEEeeeechhhcchHHHHHHHH-HHHHHHHHccCCCeeEEEecCCC------------c---------------HH
Confidence 457899999998776 566666664 88999888 79999999887541 0 11
Q ss_pred hhhhhhHHhhcc---ccceeEEEEeeeeechHh-hhhccCCC
Q psy9448 468 AMNHLFDELRLL---GDAEFTVRVSFLEIYNEE-LIDLLSPT 505 (583)
Q Consensus 468 ~~~~lf~~~~~~---~~~~~~v~~S~~eiy~e~-i~DLL~~~ 505 (583)
.-+.++..+... =.+.|.+.+.|+-+-++. ..|||.+.
T Consensus 142 Lr~~lL~fi~~k~~~Y~~~y~i~lQ~V~Lse~~~S~DlL~~~ 183 (333)
T 4etp_B 142 LRESLIKFLAEKDTIYQKQYVITLQFVFLSDDEFSQDMLLDY 183 (333)
T ss_dssp HHHHHHHHHHSTTCHHHHHEEEEEEEEECCSSSCCEESSCC-
T ss_pred HHHHHHHHHHhcccccccceEEEEEEEEEcCCCchhhhhccc
Confidence 223344444433 136789999998887765 68999875
No 174
>2v1u_A Cell division control protein 6 homolog; DNA replication, nucleotide-binding, replication, archaea; HET: ADP; 3.10A {Aeropyrum pernix}
Probab=49.67 E-value=3.6 Score=41.64 Aligned_cols=20 Identities=40% Similarity=0.524 Sum_probs=17.1
Q ss_pred ccceeEEEeeccCCCceEEe
Q psy9448 46 GYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 46 G~n~~i~ayGqtgSGKT~Tm 65 (583)
+....++-||++|+|||+.+
T Consensus 42 ~~~~~vll~G~~G~GKT~l~ 61 (387)
T 2v1u_A 42 EKPSNALLYGLTGTGKTAVA 61 (387)
T ss_dssp CCCCCEEECBCTTSSHHHHH
T ss_pred CCCCcEEEECCCCCCHHHHH
Confidence 45567999999999999877
No 175
>2j0s_A ATP-dependent RNA helicase DDX48; mRNA processing, phosphorylation, rRNA processing, mRNA splicing, mRNA transport; HET: ANP; 2.21A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 2j0q_A* 2hyi_C* 3ex7_C* 2xb2_A* 2hxy_A 2j0u_A 2j0u_B 2zu6_A
Probab=49.65 E-value=6.7 Score=40.09 Aligned_cols=25 Identities=44% Similarity=0.679 Sum_probs=19.5
Q ss_pred hHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 39 LIDEVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 39 lv~~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
.+..+++|.+ ++..++||||||.+.
T Consensus 67 ai~~i~~~~~--~lv~a~TGsGKT~~~ 91 (410)
T 2j0s_A 67 AIKQIIKGRD--VIAQSQSGTGKTATF 91 (410)
T ss_dssp HHHHHHTTCC--EEEECCTTSSHHHHH
T ss_pred HHHHHhCCCC--EEEECCCCCCchHHH
Confidence 4566778877 567789999999664
No 176
>2pl3_A Probable ATP-dependent RNA helicase DDX10; DEAD, structural genomics, structural genomic consortium, SGC, hydrolase; HET: ADP; 2.15A {Homo sapiens}
Probab=49.59 E-value=6.8 Score=36.80 Aligned_cols=24 Identities=38% Similarity=0.587 Sum_probs=18.2
Q ss_pred hHHHHhcccceeEEEeeccCCCceEE
Q psy9448 418 LIDEVLSGYNCTVFAYGQTGTGKTFT 443 (583)
Q Consensus 418 ~v~~~l~G~n~~i~ayGqtgsGKT~T 443 (583)
.+..+++|.+ ++..++||||||.+
T Consensus 55 ~i~~~~~~~~--~li~a~TGsGKT~~ 78 (236)
T 2pl3_A 55 TIGLALQGKD--VLGAAKTGSGKTLA 78 (236)
T ss_dssp HHHHHHTTCC--EEEECCTTSCHHHH
T ss_pred HHHHHhCCCC--EEEEeCCCCcHHHH
Confidence 4455677766 67788999999975
No 177
>2x8a_A Nuclear valosin-containing protein-like; nuclear protein; 2.60A {Homo sapiens}
Probab=49.56 E-value=2.5 Score=41.50 Aligned_cols=50 Identities=16% Similarity=0.297 Sum_probs=27.0
Q ss_pred cccccccccccccceeehhhhhhhHH-HHhcccc----eeEEEeeccCCCceEEe
Q psy9448 395 FGFDRVFSQESKQVDVYKYVVNPLID-EVLSGYN----CTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 395 f~fD~vf~~~~~q~~vy~~~~~~~v~-~~l~G~n----~~i~ayGqtgsGKT~Tm 444 (583)
.+||.|-+.+.-.+++.+.++.|+-. .++.+++ ..++-||+.|+|||+.+
T Consensus 7 ~~~~di~g~~~~~~~l~~~i~~~~~~~~~l~~~~l~~~~GvlL~Gp~GtGKTtLa 61 (274)
T 2x8a_A 7 VTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLA 61 (274)
T ss_dssp -----CCHHHHHHHHHHHHHTHHHHSHHHHHHTTCCCCSEEEEESSTTSCHHHHH
T ss_pred CCHHHhCCHHHHHHHHHHHHHHHhhCHHHHHHcCCCCCCeEEEECCCCCcHHHHH
Confidence 45666665554444555555555432 2444333 22889999999999654
No 178
>3iuy_A Probable ATP-dependent RNA helicase DDX53; REC-A-like, DEAD-BOX, structural genomics, structural genomi consortium, SGC, ATP-binding, hydrolase; HET: AMP; 2.40A {Homo sapiens}
Probab=49.32 E-value=6.7 Score=36.63 Aligned_cols=25 Identities=36% Similarity=0.550 Sum_probs=18.6
Q ss_pred hHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 418 LIDEVLSGYNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 418 ~v~~~l~G~n~~i~ayGqtgsGKT~Tm 444 (583)
.+..+++|.+ ++..++||||||.+.
T Consensus 50 ~i~~~~~~~~--~l~~apTGsGKT~~~ 74 (228)
T 3iuy_A 50 AWPIILQGID--LIVVAQTGTGKTLSY 74 (228)
T ss_dssp HHHHHHTTCC--EEEECCTTSCHHHHH
T ss_pred HHHHHhCCCC--EEEECCCCChHHHHH
Confidence 4455677766 477899999999653
No 179
>4fcw_A Chaperone protein CLPB; AAA domain; HET: ADP; 2.35A {Thermus thermophilus} PDB: 4fcv_A* 4fd2_A* 4fct_A*
Probab=48.93 E-value=4.9 Score=39.45 Aligned_cols=17 Identities=35% Similarity=0.417 Sum_probs=15.1
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 49 CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm 65 (583)
..++-+|++|+|||++.
T Consensus 48 ~~~ll~G~~GtGKt~la 64 (311)
T 4fcw_A 48 GSFLFLGPTGVGKTELA 64 (311)
T ss_dssp EEEEEESCSSSSHHHHH
T ss_pred eEEEEECCCCcCHHHHH
Confidence 57899999999999766
No 180
>1n0w_A DNA repair protein RAD51 homolog 1; DNA repair, homologous recombination, breast cancer susceptibility, RECA-like ATPase, protein complex; HET: DNA MSE; 1.70A {Homo sapiens} SCOP: c.37.1.11
Probab=48.61 E-value=4.8 Score=37.85 Aligned_cols=31 Identities=26% Similarity=0.339 Sum_probs=23.4
Q ss_pred hhhhHHHHhcc-c--ceeEEEeeccCCCceEEee
Q psy9448 36 VNPLIDEVLSG-Y--NCTVFAYGQTGTGKTFTME 66 (583)
Q Consensus 36 ~~plv~~~l~G-~--n~~i~ayGqtgSGKT~Tm~ 66 (583)
.-|-++.++.| + ...+.-+|++|+|||..+.
T Consensus 9 G~~~LD~~l~ggi~~G~~~~i~G~~GsGKTtl~~ 42 (243)
T 1n0w_A 9 GSKELDKLLQGGIETGSITEMFGEFRTGKTQICH 42 (243)
T ss_dssp SCHHHHHHTTTSEETTSEEEEECCTTSSHHHHHH
T ss_pred CChHHHHhhcCCCcCCeEEEEECCCCCcHHHHHH
Confidence 44667888854 3 3567889999999998773
No 181
>2z4s_A Chromosomal replication initiator protein DNAA; AAA+ ATPase, domain III (ATPase domain), ATP-binding, cytoplasm, DNA replication; HET: ADP; 3.00A {Thermotoga maritima} PDB: 2z4r_A*
Probab=48.23 E-value=3.4 Score=43.54 Aligned_cols=19 Identities=37% Similarity=0.684 Sum_probs=16.0
Q ss_pred ceeEEEeeccCCCceEEee
Q psy9448 48 NCTVFAYGQTGTGKTFTME 66 (583)
Q Consensus 48 n~~i~ayGqtgSGKT~Tm~ 66 (583)
.-.++-||++|+|||+.+.
T Consensus 130 ~~~lll~Gp~G~GKTtLa~ 148 (440)
T 2z4s_A 130 YNPLFIYGGVGLGKTHLLQ 148 (440)
T ss_dssp SCCEEEECSSSSSHHHHHH
T ss_pred CCeEEEECCCCCCHHHHHH
Confidence 3468899999999999873
No 182
>3eie_A Vacuolar protein sorting-associated protein 4; AAA ATPase, ATP-binding cassette, ATP-binding, endosome, MEM nucleotide-binding; 2.70A {Saccharomyces cerevisiae} PDB: 3eih_A* 2rko_A 3mhv_C
Probab=47.89 E-value=4.8 Score=40.20 Aligned_cols=17 Identities=35% Similarity=0.798 Sum_probs=14.9
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 49 CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm 65 (583)
..|+-||++|+|||+..
T Consensus 52 ~~vLl~GppGtGKT~la 68 (322)
T 3eie_A 52 SGILLYGPPGTGKSYLA 68 (322)
T ss_dssp CEEEEECSSSSCHHHHH
T ss_pred CeEEEECCCCCcHHHHH
Confidence 46899999999999766
No 183
>3pey_A ATP-dependent RNA helicase DBP5; RECA, DEAD-BOX, ATPase, helicase, mRNA-export, nuclear pore, hydrolase-RNA complex; HET: ADP; 1.40A {Saccharomyces cerevisiae} PDB: 3pew_A* 3pex_A* 3pez_A* 3rrm_A* 3rrn_A* 2kbe_A 3gfp_A 2kbf_A 3pev_A* 3peu_A*
Probab=47.77 E-value=7.5 Score=39.17 Aligned_cols=28 Identities=29% Similarity=0.319 Sum_probs=21.0
Q ss_pred hhHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 38 PLIDEVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 38 plv~~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
..+..+++|-...++..++||||||.+.
T Consensus 34 ~~i~~~~~~~~~~~lv~a~TGsGKT~~~ 61 (395)
T 3pey_A 34 RALPLLLHNPPRNMIAQSQSGTGKTAAF 61 (395)
T ss_dssp HHHHHHHCSSCCCEEEECCTTSCHHHHH
T ss_pred HHHHHHHcCCCCeEEEECCCCCcHHHHH
Confidence 3566777774455788899999999754
No 184
>1wrb_A DJVLGB; RNA helicase, DEAD BOX, VASA, structural genomics, NPPSFA, N project on protein structural and functional analyses; 2.40A {Dugesia japonica} SCOP: c.37.1.19
Probab=47.62 E-value=7.6 Score=36.94 Aligned_cols=24 Identities=38% Similarity=0.548 Sum_probs=18.4
Q ss_pred hHHHHhcccceeEEEeeccCCCceEE
Q psy9448 418 LIDEVLSGYNCTVFAYGQTGTGKTFT 443 (583)
Q Consensus 418 ~v~~~l~G~n~~i~ayGqtgsGKT~T 443 (583)
.+..+++|.+ ++..++||||||.+
T Consensus 53 ~i~~i~~~~~--~l~~a~TGsGKT~~ 76 (253)
T 1wrb_A 53 AIPAILEHRD--IMACAQTGSGKTAA 76 (253)
T ss_dssp HHHHHHTTCC--EEEECCTTSSHHHH
T ss_pred HHHHHhCCCC--EEEECCCCChHHHH
Confidence 4556677766 57778999999975
No 185
>3syl_A Protein CBBX; photosynthesis, rubisco activase, AAA+ protein, calvin cycle chaperone; 3.00A {Rhodobacter sphaeroides} PDB: 3syk_A 3zuh_A*
Probab=47.62 E-value=7.6 Score=38.07 Aligned_cols=19 Identities=32% Similarity=0.284 Sum_probs=15.9
Q ss_pred cceeEEEeeccCCCceEEe
Q psy9448 426 YNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 426 ~n~~i~ayGqtgsGKT~Tm 444 (583)
....++-||++|+|||+..
T Consensus 66 ~~~~vll~G~~GtGKT~la 84 (309)
T 3syl_A 66 PTLHMSFTGNPGTGKTTVA 84 (309)
T ss_dssp CCCEEEEEECTTSSHHHHH
T ss_pred CCceEEEECCCCCCHHHHH
Confidence 3446999999999999776
No 186
>3pvs_A Replication-associated recombination protein A; maintenance of genome stability Pro recombination; 2.50A {Escherichia coli}
Probab=47.58 E-value=6.6 Score=41.45 Aligned_cols=29 Identities=31% Similarity=0.480 Sum_probs=21.8
Q ss_pred hhhHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 37 NPLIDEVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 37 ~plv~~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
.++...+-.|.-..++-||++|+|||+..
T Consensus 39 ~~L~~~i~~~~~~~vLL~GppGtGKTtlA 67 (447)
T 3pvs_A 39 KPLPRAIEAGHLHSMILWGPPGTGKTTLA 67 (447)
T ss_dssp SHHHHHHHHTCCCEEEEECSTTSSHHHHH
T ss_pred HHHHHHHHcCCCcEEEEECCCCCcHHHHH
Confidence 44545555566668999999999999766
No 187
>3h1t_A Type I site-specific restriction-modification system, R (restriction) subunit; hydrolase, restriction enzyme HSDR, ATP-binding; 2.30A {Vibrio vulnificus}
Probab=47.47 E-value=5.1 Score=43.62 Aligned_cols=27 Identities=33% Similarity=0.425 Sum_probs=18.2
Q ss_pred hHHHHhcccceeEEEeeccCCCceEEee
Q psy9448 39 LIDEVLSGYNCTVFAYGQTGTGKTFTME 66 (583)
Q Consensus 39 lv~~~l~G~n~~i~ayGqtgSGKT~Tm~ 66 (583)
+++.+.+|...++++ ++||||||.++.
T Consensus 190 ~~~~~~~~~~~~ll~-~~TGsGKT~~~~ 216 (590)
T 3h1t_A 190 AVQSVLQGKKRSLIT-MATGTGKTVVAF 216 (590)
T ss_dssp HHHHHHTTCSEEEEE-ECTTSCHHHHHH
T ss_pred HHHHHhcCCCceEEE-ecCCCChHHHHH
Confidence 334444476655544 999999999864
No 188
>3vfd_A Spastin; ATPase, microtubule severing, hydrolase; 3.30A {Homo sapiens}
Probab=47.33 E-value=4 Score=42.05 Aligned_cols=53 Identities=21% Similarity=0.404 Sum_probs=30.2
Q ss_pred cccccccccccccccceeehhhhhhhHH-HHhc---ccceeEEEeeccCCCceEEee
Q psy9448 393 KTFGFDRVFSQESKQVDVYKYVVNPLID-EVLS---GYNCTVFAYGQTGTGKTFTME 445 (583)
Q Consensus 393 k~f~fD~vf~~~~~q~~vy~~~~~~~v~-~~l~---G~n~~i~ayGqtgsGKT~Tm~ 445 (583)
....||.+.+.+.--+.+.+.+..|+.. ..+. .-...|+-||++|+|||+...
T Consensus 110 ~~~~~~~iiG~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~vLL~GppGtGKT~la~ 166 (389)
T 3vfd_A 110 TAVKFDDIAGQDLAKQALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAK 166 (389)
T ss_dssp CCCCGGGSCSCHHHHHHHHHHTHHHHHCTTTSCGGGCCCSEEEEESSTTSCHHHHHH
T ss_pred CCCChHHhCCHHHHHHHHHHHHHHhccCHHHhcccCCCCceEEEECCCCCCHHHHHH
Confidence 3466787777654333333333333221 1112 223579999999999997653
No 189
>3oiy_A Reverse gyrase helicase domain; topoisomerase, DNA supercoiling, archaea, isomeras; 2.35A {Thermotoga maritima} PDB: 3p4y_A 3p4x_A*
Probab=47.19 E-value=6.2 Score=40.62 Aligned_cols=24 Identities=25% Similarity=0.324 Sum_probs=19.2
Q ss_pred hhHHHHhcccceeEEEeeccCCCceE
Q psy9448 38 PLIDEVLSGYNCTVFAYGQTGTGKTF 63 (583)
Q Consensus 38 plv~~~l~G~n~~i~ayGqtgSGKT~ 63 (583)
..+..+++|.| ++..++||||||.
T Consensus 28 ~~i~~i~~~~~--~lv~apTGsGKT~ 51 (414)
T 3oiy_A 28 LWAKRIVQGKS--FTMVAPTGVGKTT 51 (414)
T ss_dssp HHHHHHTTTCC--EECCSCSSSSHHH
T ss_pred HHHHHHhcCCC--EEEEeCCCCCHHH
Confidence 45666778875 5788999999998
No 190
>3fmp_B ATP-dependent RNA helicase DDX19B; nuclear porin, nuclear pore complex, nucleocytoplasmic trans mRNA export, protein interaction, beta-propeller; HET: ADP; 3.19A {Homo sapiens}
Probab=47.03 E-value=7.9 Score=40.76 Aligned_cols=26 Identities=31% Similarity=0.333 Sum_probs=21.0
Q ss_pred hHHHHhcccceeEEEeeccCCCceEE
Q psy9448 418 LIDEVLSGYNCTVFAYGQTGTGKTFT 443 (583)
Q Consensus 418 ~v~~~l~G~n~~i~ayGqtgsGKT~T 443 (583)
.+..++.|.+-.++..|+||||||..
T Consensus 122 ai~~il~~~~~~~l~~a~TGsGKT~~ 147 (479)
T 3fmp_B 122 ALPLMLAEPPQNLIAQSQSGTGKTAA 147 (479)
T ss_dssp HHHHHTSBSCCEEEEECCSSSSHHHH
T ss_pred HHHHHHcCCCCcEEEEcCCCCchhHH
Confidence 45566777667889999999999966
No 191
>3eie_A Vacuolar protein sorting-associated protein 4; AAA ATPase, ATP-binding cassette, ATP-binding, endosome, MEM nucleotide-binding; 2.70A {Saccharomyces cerevisiae} PDB: 3eih_A* 2rko_A 3mhv_C
Probab=47.02 E-value=3.8 Score=40.99 Aligned_cols=50 Identities=22% Similarity=0.424 Sum_probs=28.7
Q ss_pred cccccccccccccceeehhhhhhhHH-HHhccc---ceeEEEeeccCCCceEEe
Q psy9448 395 FGFDRVFSQESKQVDVYKYVVNPLID-EVLSGY---NCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 395 f~fD~vf~~~~~q~~vy~~~~~~~v~-~~l~G~---n~~i~ayGqtgsGKT~Tm 444 (583)
.+||.+.+.+.--+.+.+.+..|+.. ..+.+. ...++-||++|+|||+..
T Consensus 15 ~~~~di~G~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~vLl~GppGtGKT~la 68 (322)
T 3eie_A 15 VKWEDVAGLEGAKEALKEAVILPVKFPHLFKGNRKPTSGILLYGPPGTGKSYLA 68 (322)
T ss_dssp CCGGGSCSCHHHHHHHHHHTHHHHHCGGGCCTTCCCCCEEEEECSSSSCHHHHH
T ss_pred CCHHHhcChHHHHHHHHHHHHHHHhCHHHHhcCCCCCCeEEEECCCCCcHHHHH
Confidence 55777776654444344433333221 122221 346899999999999765
No 192
>1s2m_A Putative ATP-dependent RNA helicase DHH1; ATP-binding, RNA-binding, RNA binding protein; 2.10A {Saccharomyces cerevisiae} SCOP: c.37.1.19 c.37.1.19 PDB: 2wax_A* 2way_A
Probab=47.00 E-value=7.4 Score=39.58 Aligned_cols=26 Identities=31% Similarity=0.521 Sum_probs=19.5
Q ss_pred hhHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 38 PLIDEVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 38 plv~~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
..+..+++|.+ ++..++||||||.+.
T Consensus 50 ~~i~~i~~~~~--~li~a~TGsGKT~~~ 75 (400)
T 1s2m_A 50 EAIPVAITGRD--ILARAKNGTGKTAAF 75 (400)
T ss_dssp HHHHHHHHTCC--EEEECCTTSCHHHHH
T ss_pred HHHHHHhcCCC--EEEECCCCcHHHHHH
Confidence 34566677876 567789999999654
No 193
>3b9p_A CG5977-PA, isoform A; AAA ATPase, ATP-binding, nucleotide-binding, hydrolase; 2.70A {Drosophila melanogaster}
Probab=46.71 E-value=5.1 Score=39.19 Aligned_cols=18 Identities=28% Similarity=0.545 Sum_probs=15.7
Q ss_pred ceeEEEeeccCCCceEEe
Q psy9448 48 NCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 48 n~~i~ayGqtgSGKT~Tm 65 (583)
...|+-||++|+|||+.+
T Consensus 54 ~~~vll~Gp~GtGKT~la 71 (297)
T 3b9p_A 54 AKGLLLFGPPGNGKTLLA 71 (297)
T ss_dssp CSEEEEESSSSSCHHHHH
T ss_pred CCeEEEECcCCCCHHHHH
Confidence 467999999999999766
No 194
>4b4t_J 26S protease regulatory subunit 8 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=46.60 E-value=3.6 Score=42.82 Aligned_cols=76 Identities=24% Similarity=0.293 Sum_probs=45.8
Q ss_pred cccccccccccccceeehhhhhhhHH-HHhccc----ceeEEEeeccCCCceEEe--------------eccccCCCCcc
Q psy9448 395 FGFDRVFSQESKQVDVYKYVVNPLID-EVLSGY----NCTVFAYGQTGTGKTFTM--------------EGEKSNDPSIS 455 (583)
Q Consensus 395 f~fD~vf~~~~~q~~vy~~~~~~~v~-~~l~G~----n~~i~ayGqtgsGKT~Tm--------------~G~~~~~~~~~ 455 (583)
-+||-|-+-+.--+++-+.+..|+.. ..+.++ .-.|+-||+.|+|||... -|+.-
T Consensus 145 v~~~dIgGl~~~k~~l~e~v~~Pl~~pe~f~~~gi~~prGvLL~GPPGTGKTllAkAiA~e~~~~f~~v~~s~l------ 218 (405)
T 4b4t_J 145 STYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTDCKFIRVSGAEL------ 218 (405)
T ss_dssp CCGGGSCSCHHHHHHHHHHTHHHHHCHHHHHHHTCCCCCCEEEESCSSSSHHHHHHHHHHHHTCEEEEEEGGGG------
T ss_pred CCHHHhCCHHHHHHHHHHHHHHHHhCHHHHHhCCCCCCCceEEeCCCCCCHHHHHHHHHHhhCCCceEEEhHHh------
Confidence 45666666655555566666666653 344432 356999999999998543 22211
Q ss_pred cccCCCCccchhhhhhhhHHhhc
Q psy9448 456 WQDDPLSGIVPRAMNHLFDELRL 478 (583)
Q Consensus 456 ~~~~~~~Giipr~~~~lf~~~~~ 478 (583)
-....|--.+.++++|.....
T Consensus 219 --~sk~vGese~~vr~lF~~Ar~ 239 (405)
T 4b4t_J 219 --VQKYIGEGSRMVRELFVMARE 239 (405)
T ss_dssp --SCSSTTHHHHHHHHHHHHHHH
T ss_pred --hccccchHHHHHHHHHHHHHH
Confidence 112236667778888876554
No 195
>2c9o_A RUVB-like 1; hexameric helicase, AAA+-ATPase, ATP-binding, chromatin regulator, growth regulation, hydrolase, nuclear protein, DNA recombination; HET: ADP; 2.2A {Homo sapiens} PDB: 2xsz_A*
Probab=46.55 E-value=6.1 Score=41.70 Aligned_cols=45 Identities=20% Similarity=0.179 Sum_probs=27.2
Q ss_pred cccccccccccccceeehhhhhhhHHHHhcccc--eeEEEeeccCCCceEEe
Q psy9448 395 FGFDRVFSQESKQVDVYKYVVNPLIDEVLSGYN--CTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 395 f~fD~vf~~~~~q~~vy~~~~~~~v~~~l~G~n--~~i~ayGqtgsGKT~Tm 444 (583)
+.||.+.+. +++.+. +..+++.+..|.. ..++-||++|+|||+..
T Consensus 34 ~~~~~iiG~----~~~~~~-l~~~~~~~~~~~~~~~~iLl~GppGtGKT~la 80 (456)
T 2c9o_A 34 QAASGLVGQ----ENAREA-CGVIVELIKSKKMAGRAVLLAGPPGTGKTALA 80 (456)
T ss_dssp SEETTEESC----HHHHHH-HHHHHHHHHTTCCTTCEEEEECCTTSSHHHHH
T ss_pred hchhhccCH----HHHHHH-HHHHHHHHHhCCCCCCeEEEECCCcCCHHHHH
Confidence 445555544 333333 2344555555543 36888999999999654
No 196
>1u0j_A DNA replication protein; AAA+ protein, P-loop atpases, helicase; HET: DNA ADP; 2.10A {Adeno-associated virus - 2} SCOP: c.37.1.20 PDB: 1s9h_A
Probab=46.38 E-value=7.6 Score=37.96 Aligned_cols=29 Identities=21% Similarity=0.237 Sum_probs=22.6
Q ss_pred hhhHHHHhccc---ceeEEEeeccCCCceEEe
Q psy9448 416 NPLIDEVLSGY---NCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 416 ~~~v~~~l~G~---n~~i~ayGqtgsGKT~Tm 444 (583)
...+...++|. --+|+-||+.|+|||+..
T Consensus 90 ~~~l~~~l~~~~~~~n~~~l~GppgtGKt~~a 121 (267)
T 1u0j_A 90 ASVFLGWATKKFGKRNTIWLFGPATTGKTNIA 121 (267)
T ss_dssp HHHHHHHHTTCSTTCCEEEEECSTTSSHHHHH
T ss_pred HHHHHHHHhCCCCCCcEEEEECCCCCCHHHHH
Confidence 44577788876 347999999999998654
No 197
>1t6n_A Probable ATP-dependent RNA helicase; RECA-like fold, PRE-mRNA processing protein; HET: FLC; 1.94A {Homo sapiens} SCOP: c.37.1.19
Probab=46.34 E-value=8.2 Score=35.70 Aligned_cols=25 Identities=28% Similarity=0.510 Sum_probs=18.6
Q ss_pred hHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 418 LIDEVLSGYNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 418 ~v~~~l~G~n~~i~ayGqtgsGKT~Tm 444 (583)
.+..+++|.+ ++..++||||||.+.
T Consensus 44 ~i~~~~~~~~--~li~~~TGsGKT~~~ 68 (220)
T 1t6n_A 44 CIPQAILGMD--VLCQAKSGMGKTAVF 68 (220)
T ss_dssp HHHHHHTTCC--EEEECCTTSCHHHHH
T ss_pred HHHHHhCCCC--EEEECCCCCchhhhh
Confidence 4455667766 677889999999754
No 198
>2z0m_A 337AA long hypothetical ATP-dependent RNA helicase DEAD; ATP-binding, hydrolase, nucleotide-binding, RNA binding protein, structural genomics; 1.90A {Sulfolobus tokodaii}
Probab=46.07 E-value=8.4 Score=37.85 Aligned_cols=26 Identities=38% Similarity=0.482 Sum_probs=19.3
Q ss_pred hhHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 38 PLIDEVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 38 plv~~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
..++.+++|.+ ++..++||||||.+.
T Consensus 23 ~~i~~i~~~~~--~lv~~~TGsGKT~~~ 48 (337)
T 2z0m_A 23 KTIPLMLQGKN--VVVRAKTGSGKTAAY 48 (337)
T ss_dssp HHHHHHHTTCC--EEEECCTTSSHHHHH
T ss_pred HHHHHHhcCCC--EEEEcCCCCcHHHHH
Confidence 35566777876 566789999999754
No 199
>4gp7_A Metallophosphoesterase; polynucleotide kinase phosphatase, RNA repair, transferase; HET: ATP CIT; 2.00A {Clostridium thermocellum} PDB: 4gp6_A*
Probab=46.06 E-value=4 Score=36.69 Aligned_cols=18 Identities=28% Similarity=0.449 Sum_probs=14.8
Q ss_pred eeEEEeeccCCCceEEee
Q psy9448 49 CTVFAYGQTGTGKTFTME 66 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm~ 66 (583)
..+...|++|||||+.+-
T Consensus 10 ei~~l~G~nGsGKSTl~~ 27 (171)
T 4gp7_A 10 SLVVLIGSSGSGKSTFAK 27 (171)
T ss_dssp EEEEEECCTTSCHHHHHH
T ss_pred EEEEEECCCCCCHHHHHH
Confidence 356778999999998874
No 200
>4b4t_I 26S protease regulatory subunit 4 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=45.98 E-value=19 Score=37.69 Aligned_cols=45 Identities=29% Similarity=0.362 Sum_probs=31.2
Q ss_pred eeEEEeeccCCCceEE--------------eecccCCCCCCCcccCCCCccchhhhhHHHHHHhhcc
Q psy9448 49 CTVFAYGQTGTGKTFT--------------MEGEKSNDPSISWQDDPLSGIVPRAMNHLFDELRLLG 101 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~T--------------m~G~~~~~~~~~~~~~~~~Giipr~~~~lf~~~~~~~ 101 (583)
-.|+-||+.|+|||.. +-|+.- .+...|--.+.++.+|.......
T Consensus 217 rGvLLyGPPGTGKTlLAkAiA~e~~~~fi~v~~s~l--------~sk~vGesek~ir~lF~~Ar~~a 275 (437)
T 4b4t_I 217 KGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSEL--------IQKYLGDGPRLCRQIFKVAGENA 275 (437)
T ss_dssp SEEEEESSTTTTHHHHHHHHHHHHTCEEEEEESGGG--------CCSSSSHHHHHHHHHHHHHHHTC
T ss_pred CCCceECCCCchHHHHHHHHHHHhCCCEEEEEHHHh--------hhccCchHHHHHHHHHHHHHhcC
Confidence 5699999999999943 333221 12234777889999998877643
No 201
>4b4t_L 26S protease subunit RPT4; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=45.46 E-value=4.1 Score=42.88 Aligned_cols=49 Identities=27% Similarity=0.411 Sum_probs=31.7
Q ss_pred cccccccccccccceeehhhhhhhHH-HHhccc----ceeEEEeeccCCCceEE
Q psy9448 395 FGFDRVFSQESKQVDVYKYVVNPLID-EVLSGY----NCTVFAYGQTGTGKTFT 443 (583)
Q Consensus 395 f~fD~vf~~~~~q~~vy~~~~~~~v~-~~l~G~----n~~i~ayGqtgsGKT~T 443 (583)
.+||-|-+-+.--+++-+.+..|+.. ..+..+ .-.|+-||+.|+|||..
T Consensus 178 v~~~digGl~~~k~~l~e~v~~pl~~p~~f~~~g~~~prGvLL~GPPGtGKTll 231 (437)
T 4b4t_L 178 ITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLL 231 (437)
T ss_dssp SCSGGGCSCHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCEEEEESCTTSSHHHH
T ss_pred CChhHhCChHHHHHHHHHHHHHHHhCHHHHHhCCCCCCCeEEEECCCCCcHHHH
Confidence 46677766655555555555555543 244433 35699999999999854
No 202
>1sxj_D Activator 1 41 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=45.41 E-value=5 Score=40.16 Aligned_cols=27 Identities=37% Similarity=0.447 Sum_probs=18.7
Q ss_pred hHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 418 LIDEVLSGYNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 418 ~v~~~l~G~n~~i~ayGqtgsGKT~Tm 444 (583)
+...+..|....++-||++|+|||+.+
T Consensus 49 l~~~l~~~~~~~~ll~G~~G~GKT~la 75 (353)
T 1sxj_D 49 LKKTLKSANLPHMLFYGPPGTGKTSTI 75 (353)
T ss_dssp HHHHTTCTTCCCEEEECSTTSSHHHHH
T ss_pred HHHHHhcCCCCEEEEECCCCCCHHHHH
Confidence 333444554344889999999999765
No 203
>2eyu_A Twitching motility protein PILT; pilus retraction motor, C-terminal domain PILT, protein transport; 1.87A {Aquifex aeolicus}
Probab=45.23 E-value=6.1 Score=38.39 Aligned_cols=19 Identities=32% Similarity=0.471 Sum_probs=15.0
Q ss_pred cceeEEEeeccCCCceEEe
Q psy9448 426 YNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 426 ~n~~i~ayGqtgsGKT~Tm 444 (583)
-...+.-.|++|||||.++
T Consensus 24 ~g~~v~i~Gp~GsGKSTll 42 (261)
T 2eyu_A 24 KMGLILVTGPTGSGKSTTI 42 (261)
T ss_dssp SSEEEEEECSTTCSHHHHH
T ss_pred CCCEEEEECCCCccHHHHH
Confidence 3456777899999999765
No 204
>1in4_A RUVB, holliday junction DNA helicase RUVB; AAA+-class ATPase, winged-helix domain, ATP hydrolysis, walker A, walker B, sensor 1, sensor 2; HET: ADP; 1.60A {Thermotoga maritima} SCOP: a.4.5.11 c.37.1.20 PDB: 1in5_A* 1in6_A* 1in8_A* 1in7_A* 1j7k_A*
Probab=44.96 E-value=4 Score=41.14 Aligned_cols=17 Identities=35% Similarity=0.362 Sum_probs=14.3
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 49 CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm 65 (583)
..++-||++|+|||+.+
T Consensus 52 ~~~ll~Gp~G~GKTTLa 68 (334)
T 1in4_A 52 DHVLLAGPPGLGKTTLA 68 (334)
T ss_dssp CCEEEESSTTSSHHHHH
T ss_pred CeEEEECCCCCcHHHHH
Confidence 34677999999999876
No 205
>3fe2_A Probable ATP-dependent RNA helicase DDX5; DEAD, ADP, ATP-binding, hydrolase, nucleotide- RNA-binding, methylation, mRNA processing, mRNA S nucleus; HET: ADP; 2.60A {Homo sapiens} PDB: 4a4d_A
Probab=44.59 E-value=8.7 Score=36.30 Aligned_cols=24 Identities=38% Similarity=0.515 Sum_probs=18.0
Q ss_pred hHHHHhcccceeEEEeeccCCCceEE
Q psy9448 418 LIDEVLSGYNCTVFAYGQTGTGKTFT 443 (583)
Q Consensus 418 ~v~~~l~G~n~~i~ayGqtgsGKT~T 443 (583)
.+..+++|.+ ++..++||||||.+
T Consensus 59 ~i~~~~~g~~--~l~~apTGsGKT~~ 82 (242)
T 3fe2_A 59 GWPVALSGLD--MVGVAQTGSGKTLS 82 (242)
T ss_dssp HHHHHHHTCC--EEEEECTTSCHHHH
T ss_pred HHHHHhCCCC--EEEECCCcCHHHHH
Confidence 4455667765 56778999999976
No 206
>3llm_A ATP-dependent RNA helicase A; alpha-beta-alpha, structural genomics, structural genomics consortium, SGC, activator, ATP-binding, DNA-binding; HET: ADP; 2.80A {Homo sapiens}
Probab=44.43 E-value=8.7 Score=36.25 Aligned_cols=24 Identities=29% Similarity=0.486 Sum_probs=17.1
Q ss_pred hHHHHhcccceeEEEeeccCCCceEE
Q psy9448 418 LIDEVLSGYNCTVFAYGQTGTGKTFT 443 (583)
Q Consensus 418 ~v~~~l~G~n~~i~ayGqtgsGKT~T 443 (583)
++..+.+|. .++..|+||||||..
T Consensus 69 ~i~~i~~g~--~~~i~g~TGsGKTt~ 92 (235)
T 3llm_A 69 ILEAISQNS--VVIIRGATGCGKTTQ 92 (235)
T ss_dssp HHHHHHHCS--EEEEECCTTSSHHHH
T ss_pred HHHHHhcCC--EEEEEeCCCCCcHHh
Confidence 444555564 467889999999953
No 207
>2qp9_X Vacuolar protein sorting-associated protein 4; ATPase domain, beta domain, C-terminal helix, ATP-binding, E nucleotide-binding; 2.90A {Saccharomyces cerevisiae} PDB: 2qpa_A*
Probab=44.34 E-value=5.5 Score=40.54 Aligned_cols=50 Identities=22% Similarity=0.424 Sum_probs=28.3
Q ss_pred cccccccccccccceeehhhhhhhHH-HHhccc---ceeEEEeeccCCCceEEe
Q psy9448 395 FGFDRVFSQESKQVDVYKYVVNPLID-EVLSGY---NCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 395 f~fD~vf~~~~~q~~vy~~~~~~~v~-~~l~G~---n~~i~ayGqtgsGKT~Tm 444 (583)
.+|+.+.+.+.--+.+.+.+..|+-. ..+.+. ...|+-||++|+|||+..
T Consensus 48 ~~~~di~G~~~~~~~l~~~v~~~~~~~~~~~~~~~~~~~iLL~GppGtGKT~la 101 (355)
T 2qp9_X 48 VKWEDVAGLEGAKEALKEAVILPVKFPHLFKGNRKPTSGILLYGPPGTGKSYLA 101 (355)
T ss_dssp CCGGGSCCGGGHHHHHHHHTHHHHHCGGGGCSSCCCCCCEEEECSTTSCHHHHH
T ss_pred CCHHHhCCHHHHHHHHHHHHHHHHhCHHHHhcCCCCCceEEEECCCCCcHHHHH
Confidence 45777776654433444433333221 222221 245888999999999654
No 208
>2qz4_A Paraplegin; AAA+, SPG7, protease, ADP, structural genomics, structural G consortium, SGC, ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.22A {Homo sapiens}
Probab=44.27 E-value=5.8 Score=37.77 Aligned_cols=19 Identities=26% Similarity=0.350 Sum_probs=15.7
Q ss_pred cceeEEEeeccCCCceEEe
Q psy9448 426 YNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 426 ~n~~i~ayGqtgsGKT~Tm 444 (583)
....++-||++|+|||+..
T Consensus 38 ~~~~vll~G~~GtGKT~la 56 (262)
T 2qz4_A 38 VPKGALLLGPPGCGKTLLA 56 (262)
T ss_dssp CCCEEEEESCTTSSHHHHH
T ss_pred CCceEEEECCCCCCHHHHH
Confidence 3456899999999999765
No 209
>2oxc_A Probable ATP-dependent RNA helicase DDX20; DEAD, structural genomics, structural genomics consortium, SGC, hydrolase; HET: ADP; 1.30A {Homo sapiens} PDB: 3b7g_A*
Probab=44.19 E-value=9.3 Score=35.78 Aligned_cols=24 Identities=29% Similarity=0.390 Sum_probs=18.2
Q ss_pred hHHHHhcccceeEEEeeccCCCceEE
Q psy9448 418 LIDEVLSGYNCTVFAYGQTGTGKTFT 443 (583)
Q Consensus 418 ~v~~~l~G~n~~i~ayGqtgsGKT~T 443 (583)
.+..+++|.+ ++..++||||||.+
T Consensus 54 ~i~~~~~~~~--~l~~a~TGsGKT~~ 77 (230)
T 2oxc_A 54 AIPLGRCGLD--LIVQAKSGTGKTCV 77 (230)
T ss_dssp HHHHHHTTCC--EEEECCTTSSHHHH
T ss_pred HHHHHhCCCC--EEEECCCCCcHHHH
Confidence 4445677766 57788999999976
No 210
>2jlq_A Serine protease subunit NS3; ribonucleoprotein, nucleotide-binding, viral nucleoprotein, endoplasmic reticulum, helicase, hydrolase; 1.67A {Dengue virus 4} PDB: 2jly_A* 2jls_A* 2jlu_A 2jlv_A* 2jlw_A 2jlx_A* 2jlz_A* 2jlr_A* 2bmf_A 2bhr_A
Probab=43.80 E-value=5.6 Score=41.89 Aligned_cols=25 Identities=16% Similarity=0.193 Sum_probs=18.9
Q ss_pred hHHHHhcccceeEEEeeccCCCceEE
Q psy9448 39 LIDEVLSGYNCTVFAYGQTGTGKTFT 64 (583)
Q Consensus 39 lv~~~l~G~n~~i~ayGqtgSGKT~T 64 (583)
++..+++|.+. ++..++||||||..
T Consensus 11 ~i~~~l~~~~~-~lv~a~TGsGKT~~ 35 (451)
T 2jlq_A 11 VDEDIFRKKRL-TIMDLHPGAGKTKR 35 (451)
T ss_dssp CCGGGGSTTCE-EEECCCTTSSCCTT
T ss_pred HHHHHHhcCCe-EEEECCCCCCHhhH
Confidence 45567778665 46779999999986
No 211
>3b85_A Phosphate starvation-inducible protein; PHOH2, ATPase, PFAM: PF02562, ST genomics, PSI-2, protein structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032}
Probab=43.68 E-value=6.1 Score=37.01 Aligned_cols=26 Identities=31% Similarity=0.570 Sum_probs=18.8
Q ss_pred hhHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 38 PLIDEVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 38 plv~~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
++++++-.|-- +.-.|++|||||+.+
T Consensus 14 ~~l~~i~~Ge~--~~liG~nGsGKSTLl 39 (208)
T 3b85_A 14 HYVDAIDTNTI--VFGLGPAGSGKTYLA 39 (208)
T ss_dssp HHHHHHHHCSE--EEEECCTTSSTTHHH
T ss_pred HHHHhccCCCE--EEEECCCCCCHHHHH
Confidence 45666655644 445799999999876
No 212
>2qby_A CDC6 homolog 1, cell division control protein 6 homolog 1; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=43.51 E-value=8.9 Score=38.52 Aligned_cols=20 Identities=45% Similarity=0.670 Sum_probs=16.2
Q ss_pred ccceeEEEeeccCCCceEEe
Q psy9448 425 GYNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 425 G~n~~i~ayGqtgsGKT~Tm 444 (583)
+....++-||+.|+|||..+
T Consensus 43 ~~~~~vli~G~~G~GKTtl~ 62 (386)
T 2qby_A 43 EKPNNIFIYGLTGTGKTAVV 62 (386)
T ss_dssp CCCCCEEEEECTTSSHHHHH
T ss_pred CCCCeEEEECCCCCCHHHHH
Confidence 34567899999999999655
No 213
>3ber_A Probable ATP-dependent RNA helicase DDX47; DEAD, AMP, structural genomics, structural GEN consortium, SGC, ATP-binding, hydrolase; HET: AMP PGE; 1.40A {Homo sapiens}
Probab=43.43 E-value=9.6 Score=36.38 Aligned_cols=25 Identities=32% Similarity=0.498 Sum_probs=18.4
Q ss_pred hHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 418 LIDEVLSGYNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 418 ~v~~~l~G~n~~i~ayGqtgsGKT~Tm 444 (583)
.+..+++|.+ ++..++||||||.+.
T Consensus 73 ~i~~i~~~~~--~lv~a~TGsGKT~~~ 97 (249)
T 3ber_A 73 AIPLALQGRD--IIGLAETGSGKTGAF 97 (249)
T ss_dssp HHHHHHTTCC--EEEECCTTSCHHHHH
T ss_pred HHHHHhCCCC--EEEEcCCCCCchhHh
Confidence 4555677765 677789999999763
No 214
>2i4i_A ATP-dependent RNA helicase DDX3X; DEAD, structural genomics, SGC, structural GE consortium, hydrolase; HET: AMP; 2.20A {Homo sapiens}
Probab=43.30 E-value=9.6 Score=38.89 Aligned_cols=25 Identities=32% Similarity=0.373 Sum_probs=18.7
Q ss_pred hHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 39 LIDEVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 39 lv~~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
.+..+++|.|+ +..++||||||.+.
T Consensus 45 ~i~~i~~~~~~--lv~a~TGsGKT~~~ 69 (417)
T 2i4i_A 45 AIPIIKEKRDL--MACAQTGSGKTAAF 69 (417)
T ss_dssp HHHHHHTTCCE--EEECCTTSCHHHHH
T ss_pred HHHHHccCCCE--EEEcCCCCHHHHHH
Confidence 35566778774 67789999999754
No 215
>2w0m_A SSO2452; RECA, SSPF, unknown FUN; 2.0A {Sulfolobus solfataricus P2}
Probab=43.10 E-value=6.3 Score=36.53 Aligned_cols=30 Identities=27% Similarity=0.298 Sum_probs=21.4
Q ss_pred hhhHHHHhc-ccc--eeEEEeeccCCCceEEee
Q psy9448 37 NPLIDEVLS-GYN--CTVFAYGQTGTGKTFTME 66 (583)
Q Consensus 37 ~plv~~~l~-G~n--~~i~ayGqtgSGKT~Tm~ 66 (583)
-+.++.++. |+. ..+.-+|++|||||..+.
T Consensus 9 ~~~Ld~~~~ggi~~G~~~~i~G~~GsGKTtl~~ 41 (235)
T 2w0m_A 9 ILDFDKLIQGGIPQGFFIALTGEPGTGKTIFSL 41 (235)
T ss_dssp CHHHHGGGTTSEETTCEEEEECSTTSSHHHHHH
T ss_pred chHHHHHhcCCCcCCCEEEEEcCCCCCHHHHHH
Confidence 355677775 442 456778999999998763
No 216
>1ojl_A Transcriptional regulatory protein ZRAR; response regulator, two component system, AAA domain, NTRC family, DNA-binding; HET: ATP; 3.0A {Salmonella typhimurium}
Probab=43.02 E-value=8.1 Score=38.33 Aligned_cols=20 Identities=35% Similarity=0.554 Sum_probs=16.9
Q ss_pred ccceeEEEeeccCCCceEEe
Q psy9448 46 GYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 46 G~n~~i~ayGqtgSGKT~Tm 65 (583)
..+..|+-||++|+|||+..
T Consensus 23 ~~~~~vLi~Ge~GtGKt~lA 42 (304)
T 1ojl_A 23 PSDATVLIHGDSGTGKELVA 42 (304)
T ss_dssp STTSCEEEESCTTSCHHHHH
T ss_pred CCCCcEEEECCCCchHHHHH
Confidence 45678999999999999765
No 217
>2p5t_B PEZT; postsegregational killing system, phosphoryltransferase, HEL helix motif, transcription regulator; 3.20A {Streptococcus pneumoniae}
Probab=42.88 E-value=8 Score=37.08 Aligned_cols=29 Identities=24% Similarity=0.343 Sum_probs=19.2
Q ss_pred hhhHHHHhcccc-----eeEEEeeccCCCceEEe
Q psy9448 37 NPLIDEVLSGYN-----CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 37 ~plv~~~l~G~n-----~~i~ayGqtgSGKT~Tm 65 (583)
..++..++.|+. ..|+..|++|||||+..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~i~l~G~~GsGKSTla 49 (253)
T 2p5t_B 16 ARNLRSLTRGKKSSKQPIAILLGGQSGAGKTTIH 49 (253)
T ss_dssp HHHHHHHHTTCCCCSSCEEEEEESCGGGTTHHHH
T ss_pred HHHHHHHHccCCcccCCeEEEEECCCCCCHHHHH
Confidence 334444554433 46889999999998653
No 218
>2r44_A Uncharacterized protein; putative ATPase, structural genomics, joint center for struc genomics, JCSG; HET: MSE PG4; 2.00A {Cytophaga hutchinsonii atcc 33406}
Probab=42.84 E-value=5.4 Score=39.76 Aligned_cols=28 Identities=25% Similarity=0.434 Sum_probs=19.5
Q ss_pred hhhHHHHhcccceeEEEeeccCCCceEEee
Q psy9448 37 NPLIDEVLSGYNCTVFAYGQTGTGKTFTME 66 (583)
Q Consensus 37 ~plv~~~l~G~n~~i~ayGqtgSGKT~Tm~ 66 (583)
.-+...+..| ..++-||++|+|||+.+.
T Consensus 37 ~~l~~~l~~~--~~vll~G~pGtGKT~la~ 64 (331)
T 2r44_A 37 NRLLIGICTG--GHILLEGVPGLAKTLSVN 64 (331)
T ss_dssp HHHHHHHHHT--CCEEEESCCCHHHHHHHH
T ss_pred HHHHHHHHcC--CeEEEECCCCCcHHHHHH
Confidence 3344444454 367889999999998773
No 219
>3pfi_A Holliday junction ATP-dependent DNA helicase RUVB; probable holliday junction DNA helicase; HET: ADP; 2.69A {Campylobacter jejuni subsp}
Probab=42.84 E-value=8.8 Score=38.22 Aligned_cols=19 Identities=26% Similarity=0.252 Sum_probs=16.0
Q ss_pred cceeEEEeeccCCCceEEe
Q psy9448 47 YNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 47 ~n~~i~ayGqtgSGKT~Tm 65 (583)
....|+-||++|+|||+..
T Consensus 54 ~~~~vll~G~~GtGKT~la 72 (338)
T 3pfi_A 54 CLDHILFSGPAGLGKTTLA 72 (338)
T ss_dssp CCCCEEEECSTTSSHHHHH
T ss_pred CCCeEEEECcCCCCHHHHH
Confidence 3457899999999999876
No 220
>2db3_A ATP-dependent RNA helicase VASA; DEAD-BOX, protein-RNA complex, ATPase, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.20A {Drosophila melanogaster}
Probab=42.71 E-value=10 Score=39.58 Aligned_cols=24 Identities=42% Similarity=0.596 Sum_probs=17.7
Q ss_pred HHHHhcccceeEEEeeccCCCceEEe
Q psy9448 40 IDEVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 40 v~~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
+..+++|.+ +++.++||||||...
T Consensus 87 i~~i~~g~d--~i~~a~TGsGKT~a~ 110 (434)
T 2db3_A 87 IPVISSGRD--LMACAQTGSGKTAAF 110 (434)
T ss_dssp HHHHHTTCC--EEEECCTTSSHHHHH
T ss_pred HHHHhcCCC--EEEECCCCCCchHHH
Confidence 444567765 577889999999753
No 221
>3hu3_A Transitional endoplasmic reticulum ATPase; VCP, transport protein; HET: AGS; 2.20A {Homo sapiens} PDB: 3hu2_A* 3hu1_A* 1e32_A* 1s3s_A*
Probab=42.60 E-value=7.3 Score=41.62 Aligned_cols=51 Identities=24% Similarity=0.382 Sum_probs=30.7
Q ss_pred ccccccccccccccceeehhhhhhhHH-HHh----cccceeEEEeeccCCCceEEe
Q psy9448 394 TFGFDRVFSQESKQVDVYKYVVNPLID-EVL----SGYNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 394 ~f~fD~vf~~~~~q~~vy~~~~~~~v~-~~l----~G~n~~i~ayGqtgsGKT~Tm 444 (583)
...|+.+.+.+..-+.+.+.+..|+-. .++ ......|+-||++|+|||+..
T Consensus 200 ~~~~~~i~G~~~~~~~l~~~i~~~l~~~~~~~~~g~~~~~~vLL~GppGtGKT~lA 255 (489)
T 3hu3_A 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255 (489)
T ss_dssp CCCGGGCCSCHHHHHHHHHHTHHHHHCHHHHHHHTCCCCCEEEEECSTTSSHHHHH
T ss_pred CCCHHHcCCHHHHHHHHHHHHHHHhhCHHHHHhcCCCCCCcEEEECcCCCCHHHHH
Confidence 456777766655444455544333211 122 234467999999999999665
No 222
>3b6e_A Interferon-induced helicase C domain-containing P; DECH, DEXD/H RNA-binding helicase, innate immunity, IFIH1, S genomics; 1.60A {Homo sapiens}
Probab=42.37 E-value=6.3 Score=36.08 Aligned_cols=26 Identities=31% Similarity=0.377 Sum_probs=18.4
Q ss_pred hHHHHhcccceeEEEeeccCCCceEEee
Q psy9448 418 LIDEVLSGYNCTVFAYGQTGTGKTFTME 445 (583)
Q Consensus 418 ~v~~~l~G~n~~i~ayGqtgsGKT~Tm~ 445 (583)
.+..+++|.+ ++..++||+|||.+..
T Consensus 41 ~i~~~~~~~~--~li~~~tGsGKT~~~~ 66 (216)
T 3b6e_A 41 VAQPALEGKN--IIICLPTGSGKTRVAV 66 (216)
T ss_dssp HHHHHHTTCC--EEEECSCHHHHHHHHH
T ss_pred HHHHHhcCCC--EEEEcCCCCCHHHHHH
Confidence 3444556654 6779999999997653
No 223
>1rz3_A Hypothetical protein rbstp0775; MCSG, structural genomics, PSI, protein structure initiative; 1.90A {Geobacillus stearothermophilus} SCOP: c.37.1.6
Probab=42.33 E-value=7.7 Score=35.66 Aligned_cols=30 Identities=20% Similarity=0.184 Sum_probs=20.7
Q ss_pred hhhhHHHHhc---ccceeEEEeeccCCCceEEe
Q psy9448 36 VNPLIDEVLS---GYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 36 ~~plv~~~l~---G~n~~i~ayGqtgSGKT~Tm 65 (583)
+..+++.+.. .-...|...|++|||||+.+
T Consensus 7 ~~~l~~~~~~~~~~~~~~i~i~G~~GsGKstl~ 39 (201)
T 1rz3_A 7 IDFLCKTILAIKTAGRLVLGIDGLSRSGKTTLA 39 (201)
T ss_dssp HHHHHHHHHTSCCSSSEEEEEEECTTSSHHHHH
T ss_pred HHHHHHHHHHhccCCCeEEEEECCCCCCHHHHH
Confidence 3455555553 23356788899999999765
No 224
>4b4t_L 26S protease subunit RPT4; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=42.19 E-value=7.1 Score=41.10 Aligned_cols=17 Identities=47% Similarity=0.706 Sum_probs=14.4
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 49 CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm 65 (583)
-.|+-||++|+|||.+.
T Consensus 216 rGvLL~GPPGtGKTllA 232 (437)
T 4b4t_L 216 KGVLLYGPPGTGKTLLA 232 (437)
T ss_dssp CEEEEESCTTSSHHHHH
T ss_pred CeEEEECCCCCcHHHHH
Confidence 56999999999998654
No 225
>3pxg_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 3.65A {Bacillus subtilis}
Probab=42.04 E-value=9.5 Score=40.38 Aligned_cols=32 Identities=25% Similarity=0.375 Sum_probs=23.0
Q ss_pred hhhhHHHHhcccceeEEEeeccCCCceEEeec
Q psy9448 36 VNPLIDEVLSGYNCTVFAYGQTGTGKTFTMEG 67 (583)
Q Consensus 36 ~~plv~~~l~G~n~~i~ayGqtgSGKT~Tm~G 67 (583)
++.++..+-.+....++-||++|+|||+...+
T Consensus 189 i~~l~~~l~r~~~~~~LL~G~pG~GKT~la~~ 220 (468)
T 3pxg_A 189 IQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEG 220 (468)
T ss_dssp HHHHHHHHHCSSSCEEEEESCTTTTTHHHHHH
T ss_pred HHHHHHHHhccCCCCeEEECCCCCCHHHHHHH
Confidence 34455544455566788999999999988754
No 226
>3c8u_A Fructokinase; YP_612366.1, putative fructose transport system kinase, STRU genomics, joint center for structural genomics, JCSG; 1.95A {Silicibacter SP}
Probab=41.99 E-value=6.6 Score=36.32 Aligned_cols=30 Identities=17% Similarity=0.169 Sum_probs=19.3
Q ss_pred hhhhHHHHhc--ccceeEEEeeccCCCceEEe
Q psy9448 36 VNPLIDEVLS--GYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 36 ~~plv~~~l~--G~n~~i~ayGqtgSGKT~Tm 65 (583)
+..+++.+.+ .-.-.|.-.|++|||||+.+
T Consensus 8 ~~~~~~~~~~~~~~g~~v~I~G~sGsGKSTl~ 39 (208)
T 3c8u_A 8 CQGVLERLDPRQPGRQLVALSGAPGSGKSTLS 39 (208)
T ss_dssp HHHHHHHSCTTCCSCEEEEEECCTTSCTHHHH
T ss_pred HHHHHHHHHhcCCCCeEEEEECCCCCCHHHHH
Confidence 3344444442 33446667899999999866
No 227
>3eiq_A Eukaryotic initiation factor 4A-I; PDCD4, anti-oncogene, apoptosis, cell cycle, nucleus, phosph RNA-binding, ATP-binding, helicase, hydrolase; 3.50A {Homo sapiens}
Probab=41.98 E-value=10 Score=38.60 Aligned_cols=25 Identities=48% Similarity=0.644 Sum_probs=19.8
Q ss_pred hhHHHHhcccceeEEEeeccCCCceEE
Q psy9448 417 PLIDEVLSGYNCTVFAYGQTGTGKTFT 443 (583)
Q Consensus 417 ~~v~~~l~G~n~~i~ayGqtgsGKT~T 443 (583)
..+..+++|.+ ++..++||||||.+
T Consensus 69 ~~i~~~~~~~~--~lv~a~TGsGKT~~ 93 (414)
T 3eiq_A 69 RAILPCIKGYD--VIAQAQSGTGKTAT 93 (414)
T ss_dssp HHHHHHHTTCC--EEECCCSCSSSHHH
T ss_pred HHhHHHhCCCC--EEEECCCCCcccHH
Confidence 34566677877 68899999999976
No 228
>4a74_A DNA repair and recombination protein RADA; hydrolase, recombinase; HET: DNA ANP; 1.48A {Pyrococcus furiosus} PDB: 4a6x_A* 4a6p_A* 4a7o_A*
Probab=41.72 E-value=7.7 Score=35.95 Aligned_cols=29 Identities=28% Similarity=0.495 Sum_probs=21.8
Q ss_pred hhhHHHHhc-ccc--eeEEEeeccCCCceEEe
Q psy9448 37 NPLIDEVLS-GYN--CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 37 ~plv~~~l~-G~n--~~i~ayGqtgSGKT~Tm 65 (583)
-|-++.++. |+. ..+.-.|++|||||..+
T Consensus 11 ~~~LD~~l~ggi~~G~~~~l~G~nGsGKSTll 42 (231)
T 4a74_A 11 SKSLDKLLGGGIETQAITEVFGEFGSGKTQLA 42 (231)
T ss_dssp CHHHHHHTTSSEESSEEEEEEESTTSSHHHHH
T ss_pred ChhHHhHhcCCCCCCcEEEEECCCCCCHHHHH
Confidence 466777774 443 46778899999999876
No 229
>3hu3_A Transitional endoplasmic reticulum ATPase; VCP, transport protein; HET: AGS; 2.20A {Homo sapiens} PDB: 3hu2_A* 3hu1_A* 1e32_A* 1s3s_A*
Probab=41.67 E-value=4.2 Score=43.52 Aligned_cols=19 Identities=37% Similarity=0.579 Sum_probs=16.0
Q ss_pred cceeEEEeeccCCCceEEe
Q psy9448 47 YNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 47 ~n~~i~ayGqtgSGKT~Tm 65 (583)
....|+-||++|+|||+..
T Consensus 237 ~~~~vLL~GppGtGKT~lA 255 (489)
T 3hu3_A 237 PPRGILLYGPPGTGKTLIA 255 (489)
T ss_dssp CCCEEEEECSTTSSHHHHH
T ss_pred CCCcEEEECcCCCCHHHHH
Confidence 4467999999999999766
No 230
>1q0u_A Bstdead; DEAD protein, RNA binding protein; 1.85A {Geobacillus stearothermophilus} SCOP: c.37.1.19
Probab=41.66 E-value=7.2 Score=36.16 Aligned_cols=24 Identities=42% Similarity=0.584 Sum_probs=18.0
Q ss_pred hHHHHhcccceeEEEeeccCCCceEE
Q psy9448 418 LIDEVLSGYNCTVFAYGQTGTGKTFT 443 (583)
Q Consensus 418 ~v~~~l~G~n~~i~ayGqtgsGKT~T 443 (583)
.+..+++|.+ ++..++||||||.+
T Consensus 34 ~i~~~~~~~~--~lv~a~TGsGKT~~ 57 (219)
T 1q0u_A 34 IIPGALRGES--MVGQSQTGTGKTHA 57 (219)
T ss_dssp HHHHHHHTCC--EEEECCSSHHHHHH
T ss_pred HHHHHhCCCC--EEEECCCCChHHHH
Confidence 4455667765 57789999999976
No 231
>2chq_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATP ATP-binding, nucleotide-binding; HET: ANP; 3.5A {Archaeoglobus fulgidus} PDB: 2chv_A
Probab=41.58 E-value=6 Score=38.78 Aligned_cols=21 Identities=33% Similarity=0.289 Sum_probs=16.6
Q ss_pred cccceeEEEeeccCCCceEEe
Q psy9448 45 SGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 45 ~G~n~~i~ayGqtgSGKT~Tm 65 (583)
.|....++-||++|+|||++.
T Consensus 35 ~~~~~~~ll~G~~G~GKt~la 55 (319)
T 2chq_A 35 RKNIPHLLFSGPPGTGKTATA 55 (319)
T ss_dssp TTCCCCEEEESSSSSSHHHHH
T ss_pred CCCCCeEEEECcCCcCHHHHH
Confidence 454444899999999999876
No 232
>3i5x_A ATP-dependent RNA helicase MSS116; protein-RNA complex, RNA helicase, DEAD-BOX, ATP-binding, HE hydrolase, mitochondrion; HET: ANP; 1.90A {Saccharomyces cerevisiae} PDB: 3i5y_A* 3i61_A* 3i62_A* 3sqx_A* 4db2_A 4db4_A
Probab=41.43 E-value=12 Score=40.35 Aligned_cols=26 Identities=46% Similarity=0.630 Sum_probs=19.7
Q ss_pred hHHHHhcccceeEEEeeccCCCceEE
Q psy9448 39 LIDEVLSGYNCTVFAYGQTGTGKTFT 64 (583)
Q Consensus 39 lv~~~l~G~n~~i~ayGqtgSGKT~T 64 (583)
.+..++.|-+--++..++||||||.+
T Consensus 102 ~i~~~l~~~~~~~lv~apTGsGKTl~ 127 (563)
T 3i5x_A 102 TIKPILSSEDHDVIARAKTGTGKTFA 127 (563)
T ss_dssp HHHHHHSSSSEEEEEECCTTSCHHHH
T ss_pred HHHHHhcCCCCeEEEECCCCCCccHH
Confidence 45566755555678889999999975
No 233
>3lw7_A Adenylate kinase related protein (ADKA-like); AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 2.30A {Sulfolobus solfataricus} PDB: 3h0k_A
Probab=41.32 E-value=7.1 Score=34.19 Aligned_cols=16 Identities=25% Similarity=0.432 Sum_probs=13.3
Q ss_pred eEEEeeccCCCceEEe
Q psy9448 50 TVFAYGQTGTGKTFTM 65 (583)
Q Consensus 50 ~i~ayGqtgSGKT~Tm 65 (583)
.|+-.|.+|||||+..
T Consensus 3 ~I~l~G~~GsGKsT~a 18 (179)
T 3lw7_A 3 VILITGMPGSGKSEFA 18 (179)
T ss_dssp EEEEECCTTSCHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4778899999999754
No 234
>2qby_A CDC6 homolog 1, cell division control protein 6 homolog 1; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=41.30 E-value=5.4 Score=40.22 Aligned_cols=19 Identities=47% Similarity=0.719 Sum_probs=16.2
Q ss_pred cceeEEEeeccCCCceEEe
Q psy9448 47 YNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 47 ~n~~i~ayGqtgSGKT~Tm 65 (583)
....++-||++|+|||+.+
T Consensus 44 ~~~~vli~G~~G~GKTtl~ 62 (386)
T 2qby_A 44 KPNNIFIYGLTGTGKTAVV 62 (386)
T ss_dssp CCCCEEEEECTTSSHHHHH
T ss_pred CCCeEEEECCCCCCHHHHH
Confidence 3567899999999999876
No 235
>2v1x_A ATP-dependent DNA helicase Q1; DNA strand annealing, mismatch repair, nucleotide-binding, DNA-binding, polymorphism, nuclear protein, ATPase; HET: ADP; 2.00A {Homo sapiens} PDB: 2wwy_A*
Probab=41.18 E-value=11 Score=41.15 Aligned_cols=26 Identities=31% Similarity=0.437 Sum_probs=20.9
Q ss_pred hhhHHHHhcccceeEEEeeccCCCceEE
Q psy9448 37 NPLIDEVLSGYNCTVFAYGQTGTGKTFT 64 (583)
Q Consensus 37 ~plv~~~l~G~n~~i~ayGqtgSGKT~T 64 (583)
..+|+.+++|.+ +++.++||+|||.+
T Consensus 50 ~~~i~~il~g~d--~lv~~pTGsGKTl~ 75 (591)
T 2v1x_A 50 LETINVTMAGKE--VFLVMPTGGGKSLC 75 (591)
T ss_dssp HHHHHHHHTTCC--EEEECCTTSCTTHH
T ss_pred HHHHHHHHcCCC--EEEEECCCChHHHH
Confidence 456778888988 57788999999975
No 236
>2qnr_A Septin-2, protein NEDD5; structural genomics consortium, SGC, mitosis, GDP, C cycle, cell division, GTP-binding, nucleotide-binding; HET: GDP; 2.60A {Homo sapiens} PDB: 2qa5_A* 3ftq_A*
Probab=41.04 E-value=5.7 Score=39.42 Aligned_cols=24 Identities=29% Similarity=0.607 Sum_probs=16.6
Q ss_pred HHhcccceeEEEeeccCCCceEEe
Q psy9448 42 EVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 42 ~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
.+++|++-.|...|++|+|||..|
T Consensus 12 ~~l~~~~~~I~lvG~nG~GKSTLl 35 (301)
T 2qnr_A 12 SVKKGFEFTLMVVGESGLGKSTLI 35 (301)
T ss_dssp ------CEEEEEEEETTSSHHHHH
T ss_pred EEEcCCCEEEEEECCCCCCHHHHH
Confidence 467899999999999999999765
No 237
>3fho_A ATP-dependent RNA helicase DBP5; mRNA export, ATPase, translation termination, binding, hydrolase, membrane, mRNA transport; 2.80A {Schizosaccharomyces pombe}
Probab=40.77 E-value=11 Score=40.34 Aligned_cols=28 Identities=29% Similarity=0.329 Sum_probs=21.3
Q ss_pred hhHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 38 PLIDEVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 38 plv~~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
..+..+++|.+..++..++||||||.+.
T Consensus 148 ~ai~~i~~~~~~~~ll~apTGsGKT~~~ 175 (508)
T 3fho_A 148 KALPLLLSNPPRNMIGQSQSGTGKTAAF 175 (508)
T ss_dssp SSHHHHHCSSCCCEEEECCSSTTSHHHH
T ss_pred HHHHHHHcCCCCCEEEECCCCccHHHHH
Confidence 3467778874456688899999999863
No 238
>3fht_A ATP-dependent RNA helicase DDX19B; DBP5, DEAD-box helicase, RNA dependent ATPase, mRNA export, nucleocytoplasmic transport, NUP214, CAN; HET: ANP; 2.20A {Homo sapiens} PDB: 3ews_A* 3g0h_A* 3fhc_B
Probab=40.75 E-value=11 Score=38.35 Aligned_cols=27 Identities=30% Similarity=0.310 Sum_probs=20.9
Q ss_pred hhHHHHhcccceeEEEeeccCCCceEE
Q psy9448 417 PLIDEVLSGYNCTVFAYGQTGTGKTFT 443 (583)
Q Consensus 417 ~~v~~~l~G~n~~i~ayGqtgsGKT~T 443 (583)
..+..+++|.+-.++..++||||||..
T Consensus 54 ~~i~~~~~~~~~~~lv~apTGsGKT~~ 80 (412)
T 3fht_A 54 NALPLMLAEPPQNLIAQSQSGTGKTAA 80 (412)
T ss_dssp HHHHHHHSSSCCCEEEECCTTSCHHHH
T ss_pred HHHHHHhcCCCCeEEEECCCCchHHHH
Confidence 345666777556788999999999976
No 239
>3u61_B DNA polymerase accessory protein 44; AAA+, ATP hydrolase, clamp loader, sliding clamp, primer-TEM DNA, DNA binding protein-DNA complex; HET: DNA ADP 08T; 3.20A {Enterobacteria phage T4} PDB: 3u5z_B* 3u60_B*
Probab=40.44 E-value=7.1 Score=38.73 Aligned_cols=19 Identities=26% Similarity=0.317 Sum_probs=15.5
Q ss_pred ceeEEEeeccCCCceEEee
Q psy9448 48 NCTVFAYGQTGTGKTFTME 66 (583)
Q Consensus 48 n~~i~ayGqtgSGKT~Tm~ 66 (583)
...++-+|++|+|||+++.
T Consensus 48 ~~~~L~~G~~G~GKT~la~ 66 (324)
T 3u61_B 48 PHIILHSPSPGTGKTTVAK 66 (324)
T ss_dssp CSEEEECSSTTSSHHHHHH
T ss_pred CeEEEeeCcCCCCHHHHHH
Confidence 3567888999999998873
No 240
>1w36_D RECD, exodeoxyribonuclease V alpha chain; recombination, helicase, hydrolase, DNA repair; HET: DNA; 3.1A {Escherichia coli} SCOP: c.37.1.19 c.37.1.19 PDB: 3k70_D*
Probab=40.17 E-value=7.5 Score=42.72 Aligned_cols=25 Identities=32% Similarity=0.341 Sum_probs=18.4
Q ss_pred HHHHhcccceeEEEeeccCCCceEEee
Q psy9448 40 IDEVLSGYNCTVFAYGQTGTGKTFTME 66 (583)
Q Consensus 40 v~~~l~G~n~~i~ayGqtgSGKT~Tm~ 66 (583)
+..++. +..++..|++|||||+|+-
T Consensus 158 i~~~l~--~~~~vi~G~pGTGKTt~l~ 182 (608)
T 1w36_D 158 AAVALT--RRISVISGGPGTGKTTTVA 182 (608)
T ss_dssp HHHHHT--BSEEEEECCTTSTHHHHHH
T ss_pred HHHHhc--CCCEEEEeCCCCCHHHHHH
Confidence 344444 3567889999999998874
No 241
>2qby_B CDC6 homolog 3, cell division control protein 6 homolog 3; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=40.13 E-value=11 Score=38.10 Aligned_cols=27 Identities=33% Similarity=0.413 Sum_probs=18.8
Q ss_pred hHHHHhc-ccceeEEEeeccCCCceEEe
Q psy9448 418 LIDEVLS-GYNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 418 ~v~~~l~-G~n~~i~ayGqtgsGKT~Tm 444 (583)
.+..++. +....++-||++|+|||..+
T Consensus 35 ~l~~~~~~~~~~~vll~G~~G~GKT~la 62 (384)
T 2qby_B 35 AIRYFVKNEVKFSNLFLGLTGTGKTFVS 62 (384)
T ss_dssp HHHHHHTTCCCCEEEEEECTTSSHHHHH
T ss_pred HHHHHHcCCCCCcEEEECCCCCCHHHHH
Confidence 3344433 33458999999999999554
No 242
>1sxj_B Activator 1 37 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=40.12 E-value=10 Score=37.14 Aligned_cols=27 Identities=26% Similarity=0.288 Sum_probs=18.5
Q ss_pred hHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 39 LIDEVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 39 lv~~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
+...+-.|.-..++-||+.|+|||+..
T Consensus 33 l~~~l~~~~~~~~ll~G~~G~GKt~la 59 (323)
T 1sxj_B 33 LQQIAKDGNMPHMIISGMPGIGKTTSV 59 (323)
T ss_dssp HHHHHHSCCCCCEEEECSTTSSHHHHH
T ss_pred HHHHHHcCCCCeEEEECcCCCCHHHHH
Confidence 333333444334899999999999776
No 243
>1w5s_A Origin recognition complex subunit 2 ORC2; replication, CDC6, DNA replication initiation, DNA BIND protein, AAA+ ATPase; HET: ADP; 2.4A {Aeropyrum pernix} SCOP: a.4.5.11 c.37.1.20 PDB: 1w5t_A*
Probab=39.94 E-value=7.8 Score=39.58 Aligned_cols=25 Identities=32% Similarity=0.533 Sum_probs=19.0
Q ss_pred HHHhcc---cceeEEE--eeccCCCceEEe
Q psy9448 41 DEVLSG---YNCTVFA--YGQTGTGKTFTM 65 (583)
Q Consensus 41 ~~~l~G---~n~~i~a--yGqtgSGKT~Tm 65 (583)
..+..| -...++. ||+.|+|||+.+
T Consensus 40 ~~~~~~~~~~~~~~li~i~G~~G~GKT~L~ 69 (412)
T 1w5s_A 40 NRLLSGAGLSDVNMIYGSIGRVGIGKTTLA 69 (412)
T ss_dssp HHHHTSSCBCCEEEEEECTTCCSSSHHHHH
T ss_pred HHHhcCCCCCCCEEEEeCcCcCCCCHHHHH
Confidence 444555 4567888 999999999876
No 244
>2ewv_A Twitching motility protein PILT; pilus retraction motor, ATPase, hexameric PILT, protein TRAN; HET: ADP; 2.80A {Aquifex aeolicus} PDB: 2eww_A* 2gsz_A*
Probab=39.68 E-value=7.7 Score=39.80 Aligned_cols=27 Identities=26% Similarity=0.329 Sum_probs=18.4
Q ss_pred hHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 418 LIDEVLSGYNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 418 ~v~~~l~G~n~~i~ayGqtgsGKT~Tm 444 (583)
.+..+.-.....+.-.|+||||||.++
T Consensus 127 ~l~~l~~~~g~~i~ivG~~GsGKTTll 153 (372)
T 2ewv_A 127 KVLELCHRKMGLILVTGPTGSGKSTTI 153 (372)
T ss_dssp SHHHHTTSSSEEEEEECSSSSSHHHHH
T ss_pred HHHHHhhcCCCEEEEECCCCCCHHHHH
Confidence 344433334456788899999999776
No 245
>3pvs_A Replication-associated recombination protein A; maintenance of genome stability Pro recombination; 2.50A {Escherichia coli}
Probab=39.43 E-value=9.6 Score=40.17 Aligned_cols=29 Identities=31% Similarity=0.480 Sum_probs=21.2
Q ss_pred hhhHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 416 NPLIDEVLSGYNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 416 ~~~v~~~l~G~n~~i~ayGqtgsGKT~Tm 444 (583)
..+...+-.|.-..++-||++|+|||+..
T Consensus 39 ~~L~~~i~~~~~~~vLL~GppGtGKTtlA 67 (447)
T 3pvs_A 39 KPLPRAIEAGHLHSMILWGPPGTGKTTLA 67 (447)
T ss_dssp SHHHHHHHHTCCCEEEEECSTTSSHHHHH
T ss_pred HHHHHHHHcCCCcEEEEECCCCCcHHHHH
Confidence 34444445565568999999999999665
No 246
>3upu_A ATP-dependent DNA helicase DDA; RECA-like domain, SH3 domain, PIN-tower interface, coupling hydrolysis to DNA unwinding, ssDNA; 3.30A {Enterobacteria phage T4}
Probab=39.24 E-value=8.2 Score=40.67 Aligned_cols=17 Identities=35% Similarity=0.356 Sum_probs=15.0
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 49 CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm 65 (583)
..++..|..|||||+++
T Consensus 46 ~~~li~G~aGTGKT~ll 62 (459)
T 3upu_A 46 HHVTINGPAGTGATTLT 62 (459)
T ss_dssp CEEEEECCTTSCHHHHH
T ss_pred CEEEEEeCCCCCHHHHH
Confidence 47889999999999876
No 247
>1xti_A Probable ATP-dependent RNA helicase P47; alpha-beta fold, gene regulation; 1.95A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 1xtj_A* 1xtk_A
Probab=39.21 E-value=12 Score=37.77 Aligned_cols=26 Identities=27% Similarity=0.484 Sum_probs=19.4
Q ss_pred hhHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 38 PLIDEVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 38 plv~~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
..+..+++|.+ ++..++||||||.+.
T Consensus 37 ~~i~~~~~~~~--~lv~a~TGsGKT~~~ 62 (391)
T 1xti_A 37 ECIPQAILGMD--VLCQAKSGMGKTAVF 62 (391)
T ss_dssp HHHHHHTTTCC--EEEECSSCSSHHHHH
T ss_pred HHHHHHhcCCc--EEEECCCCCcHHHHH
Confidence 35666777866 566789999999754
No 248
>1kgd_A CASK, peripheral plasma membrane CASK; maguk, guanylate kinase like domain, protein binding; 1.31A {Homo sapiens} SCOP: c.37.1.1
Probab=38.88 E-value=6 Score=35.70 Aligned_cols=16 Identities=25% Similarity=0.478 Sum_probs=13.1
Q ss_pred eEEEeeccCCCceEEe
Q psy9448 50 TVFAYGQTGTGKTFTM 65 (583)
Q Consensus 50 ~i~ayGqtgSGKT~Tm 65 (583)
.+.-.|++|||||..+
T Consensus 7 ~i~i~GpsGsGKSTL~ 22 (180)
T 1kgd_A 7 TLVLLGAHGVGRRHIK 22 (180)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4667799999998766
No 249
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=38.88 E-value=6.3 Score=41.49 Aligned_cols=51 Identities=20% Similarity=0.350 Sum_probs=28.5
Q ss_pred ccccccccccccccceeehhhhhhhHH-HHhcc---cceeEEEeeccCCCceEEe
Q psy9448 394 TFGFDRVFSQESKQVDVYKYVVNPLID-EVLSG---YNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 394 ~f~fD~vf~~~~~q~~vy~~~~~~~v~-~~l~G---~n~~i~ayGqtgsGKT~Tm 444 (583)
...||.+.+.+.--+.+.+.+..|+-. .++.| -...|+-||++|+|||+..
T Consensus 130 ~~~~~di~G~~~~k~~l~~~v~~p~~~~~~~~~~~~~~~~vLL~GppGtGKT~lA 184 (444)
T 2zan_A 130 NVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLA 184 (444)
T ss_dssp CCCGGGSCSCHHHHHHHHHHHTHHHHCTTTTSGGGCCCSEEEEECSTTSSHHHHH
T ss_pred CCCHHHhcCHHHHHHHHHHHHHHHhhCHHHhhccCCCCceEEEECCCCCCHHHHH
Confidence 356777776543333333333233221 12333 2356899999999999765
No 250
>4b4t_H 26S protease regulatory subunit 7 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=38.69 E-value=5.7 Score=42.08 Aligned_cols=49 Identities=24% Similarity=0.367 Sum_probs=33.2
Q ss_pred cccccccccccccceeehhhhhhhHH-HHhccc----ceeEEEeeccCCCceEE
Q psy9448 395 FGFDRVFSQESKQVDVYKYVVNPLID-EVLSGY----NCTVFAYGQTGTGKTFT 443 (583)
Q Consensus 395 f~fD~vf~~~~~q~~vy~~~~~~~v~-~~l~G~----n~~i~ayGqtgsGKT~T 443 (583)
-+||-|-+-+.--+++.+.+..|+.. ..+.++ .-.|+-||+.|+|||..
T Consensus 206 vt~~DIgGl~~~k~~L~e~V~~pl~~pe~f~~~Gi~pprGILLyGPPGTGKTlL 259 (467)
T 4b4t_H 206 VTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLC 259 (467)
T ss_dssp CCCSSCTTCHHHHHHHHHHTHHHHHCHHHHHHHTCCCCSEEEECSCTTSSHHHH
T ss_pred CCHHHhccHHHHHHHHHHHHHHHhcCHHHHHHCCCCCCCceEeeCCCCCcHHHH
Confidence 56788877766555566665556543 244433 35699999999999853
No 251
>2qag_C Septin-7; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=38.57 E-value=5.8 Score=41.48 Aligned_cols=24 Identities=29% Similarity=0.603 Sum_probs=20.3
Q ss_pred HHhcccceeEEEeeccCCCceEEe
Q psy9448 42 EVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 42 ~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
.+++|++-.|...|++|+|||..|
T Consensus 25 ~vl~~vsf~I~lvG~sGaGKSTLl 48 (418)
T 2qag_C 25 SVKRGFEFTLMVVGESGLGKSTLI 48 (418)
T ss_dssp TCC-CCCEEEEEECCTTSSHHHHH
T ss_pred EEecCCCEEEEEECCCCCcHHHHH
Confidence 368899999999999999999765
No 252
>2qp9_X Vacuolar protein sorting-associated protein 4; ATPase domain, beta domain, C-terminal helix, ATP-binding, E nucleotide-binding; 2.90A {Saccharomyces cerevisiae} PDB: 2qpa_A*
Probab=38.55 E-value=7.5 Score=39.50 Aligned_cols=17 Identities=35% Similarity=0.798 Sum_probs=14.6
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 49 CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm 65 (583)
..|+-||++|+|||+..
T Consensus 85 ~~iLL~GppGtGKT~la 101 (355)
T 2qp9_X 85 SGILLYGPPGTGKSYLA 101 (355)
T ss_dssp CCEEEECSTTSCHHHHH
T ss_pred ceEEEECCCCCcHHHHH
Confidence 35888999999999766
No 253
>1jr3_A DNA polymerase III subunit gamma; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} SCOP: a.80.1.1 c.37.1.20 PDB: 1xxh_B* 3glh_B* 3glf_B* 3gli_B* 3glg_B* 1xxi_B*
Probab=38.49 E-value=8 Score=38.92 Aligned_cols=29 Identities=24% Similarity=0.301 Sum_probs=19.6
Q ss_pred hhHHHHhccc-ceeEEEeeccCCCceEEee
Q psy9448 38 PLIDEVLSGY-NCTVFAYGQTGTGKTFTME 66 (583)
Q Consensus 38 plv~~~l~G~-n~~i~ayGqtgSGKT~Tm~ 66 (583)
.+...+-.|. ...++-||+.|+|||+++.
T Consensus 27 ~L~~~l~~~~~~~~~ll~G~~G~GKT~la~ 56 (373)
T 1jr3_A 27 ALANGLSLGRIHHAYLFSGTRGVGKTSIAR 56 (373)
T ss_dssp HHHHHHHHTCCCSEEEEESCTTSSHHHHHH
T ss_pred HHHHHHHhCCCCeEEEEECCCCCCHHHHHH
Confidence 3333333443 4568899999999998763
No 254
>3a00_A Guanylate kinase, GMP kinase; domain movement, dimerization, acetylation, ATP-binding, nucleotide-binding, phosphoprotein, transferase; 1.80A {Saccharomyces cerevisiae} PDB: 1ex6_A* 1ex7_A 1gky_A* 2zzz_A 3sqk_A 4f4j_A 2zzy_A
Probab=38.33 E-value=5.9 Score=35.95 Aligned_cols=16 Identities=31% Similarity=0.588 Sum_probs=12.9
Q ss_pred eEEEeeccCCCceEEe
Q psy9448 50 TVFAYGQTGTGKTFTM 65 (583)
Q Consensus 50 ~i~ayGqtgSGKT~Tm 65 (583)
.+.-.|++|||||+++
T Consensus 3 ii~l~GpsGaGKsTl~ 18 (186)
T 3a00_A 3 PIVISGPSGTGKSTLL 18 (186)
T ss_dssp CEEEESSSSSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 3456799999999876
No 255
>1rif_A DAR protein, DNA helicase UVSW; bacteriophage, RECG, SF2, DNA binding protein; HET: DNA; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.23
Probab=38.27 E-value=9.9 Score=36.91 Aligned_cols=26 Identities=15% Similarity=0.078 Sum_probs=18.4
Q ss_pred hHHHHhcccceeEEEeeccCCCceEEee
Q psy9448 39 LIDEVLSGYNCTVFAYGQTGTGKTFTME 66 (583)
Q Consensus 39 lv~~~l~G~n~~i~ayGqtgSGKT~Tm~ 66 (583)
.+..++++.++ +..++||||||.+..
T Consensus 121 ai~~~l~~~~~--ll~~~tGsGKT~~~~ 146 (282)
T 1rif_A 121 AVFEGLVNRRR--ILNLPTSAGRSLIQA 146 (282)
T ss_dssp HHHHHHHHSEE--EECCCTTSCHHHHHH
T ss_pred HHHHHHhcCCe--EEEcCCCCCcHHHHH
Confidence 45556666554 338999999998763
No 256
>3hws_A ATP-dependent CLP protease ATP-binding subunit CL; CLPXP, AAA+ molecular machine, hexamer, asymmetric,, ATP-BIN chaperone, metal-binding; HET: ADP; 3.25A {Escherichia coli} PDB: 3hte_A
Probab=38.24 E-value=7.9 Score=39.25 Aligned_cols=18 Identities=33% Similarity=0.628 Sum_probs=15.0
Q ss_pred ceeEEEeeccCCCceEEe
Q psy9448 48 NCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 48 n~~i~ayGqtgSGKT~Tm 65 (583)
...|+-||++|+|||+..
T Consensus 51 ~~~vll~GppGtGKT~la 68 (363)
T 3hws_A 51 KSNILLIGPTGSGKTLLA 68 (363)
T ss_dssp CCCEEEECCTTSSHHHHH
T ss_pred CCeEEEECCCCCCHHHHH
Confidence 456888999999999765
No 257
>2fz4_A DNA repair protein RAD25; RECA-like domain, DNA damage recognition domain, DNA binding; HET: DNA; 2.40A {Archaeoglobus fulgidus} SCOP: c.37.1.19
Probab=38.20 E-value=11 Score=35.77 Aligned_cols=25 Identities=24% Similarity=0.159 Sum_probs=17.8
Q ss_pred HHHhcccceeEEEeeccCCCceEEeec
Q psy9448 420 DEVLSGYNCTVFAYGQTGTGKTFTMEG 446 (583)
Q Consensus 420 ~~~l~G~n~~i~ayGqtgsGKT~Tm~G 446 (583)
..++++.+ ++..|+||+|||+....
T Consensus 103 ~~~~~~~~--~ll~~~tG~GKT~~a~~ 127 (237)
T 2fz4_A 103 ERWLVDKR--GCIVLPTGSGKTHVAMA 127 (237)
T ss_dssp HHHTTTSE--EEEEESSSTTHHHHHHH
T ss_pred HHHHhCCC--EEEEeCCCCCHHHHHHH
Confidence 34455544 67788999999987643
No 258
>3tr0_A Guanylate kinase, GMP kinase; purines, pyrimidines, nucleosides, nucleotides, transferase; HET: 5GP; 1.85A {Coxiella burnetii}
Probab=38.04 E-value=6.3 Score=35.97 Aligned_cols=16 Identities=25% Similarity=0.333 Sum_probs=13.0
Q ss_pred eEEEeeccCCCceEEe
Q psy9448 50 TVFAYGQTGTGKTFTM 65 (583)
Q Consensus 50 ~i~ayGqtgSGKT~Tm 65 (583)
.|.-.|++|||||+.+
T Consensus 9 ii~l~Gp~GsGKSTl~ 24 (205)
T 3tr0_A 9 LFIISAPSGAGKTSLV 24 (205)
T ss_dssp EEEEECCTTSCHHHHH
T ss_pred EEEEECcCCCCHHHHH
Confidence 4556799999999865
No 259
>2cvh_A DNA repair and recombination protein RADB; filament formation, homologous recombination, ATPase domain, hyperthermophIle; HET: DNA; 2.20A {Thermococcus kodakarensis} PDB: 2cvf_A*
Probab=38.02 E-value=14 Score=33.90 Aligned_cols=29 Identities=28% Similarity=0.480 Sum_probs=22.5
Q ss_pred hhhHHHHhc-ccc--eeEEEeeccCCCceEEe
Q psy9448 37 NPLIDEVLS-GYN--CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 37 ~plv~~~l~-G~n--~~i~ayGqtgSGKT~Tm 65 (583)
-+-++.++. |+. ..+.-+|++|||||..+
T Consensus 6 ~~~LD~~l~Ggi~~G~~~~i~G~~GsGKTtl~ 37 (220)
T 2cvh_A 6 TKSLDSLLGGGFAPGVLTQVYGPYASGKTTLA 37 (220)
T ss_dssp CHHHHHHTTSSBCTTSEEEEECSTTSSHHHHH
T ss_pred cHHHHHhhcCCCcCCEEEEEECCCCCCHHHHH
Confidence 356788886 554 46889999999999776
No 260
>4a2p_A RIG-I, retinoic acid inducible protein I; hydrolase, superfamily 2 RNA helicase, ATP and dsRNA binding antiviral signalling pathway; 3.00A {Anas platyrhynchos} PDB: 4a36_A*
Probab=37.78 E-value=13 Score=39.55 Aligned_cols=25 Identities=36% Similarity=0.605 Sum_probs=19.4
Q ss_pred hHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 39 LIDEVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 39 lv~~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
.+..+++|.| ++..++||||||.+.
T Consensus 15 ~i~~~~~~~~--~l~~~~tGsGKT~~~ 39 (556)
T 4a2p_A 15 LAQPAINGKN--ALICAPTGSGKTFVS 39 (556)
T ss_dssp HHHHHHTTCC--EEEECCTTSCHHHHH
T ss_pred HHHHHHcCCC--EEEEcCCCChHHHHH
Confidence 5667778877 566789999999764
No 261
>1qhx_A CPT, protein (chloramphenicol phosphotransferase); kinase, antibiotic resistance, phosphorylation, mononucleoti binding fold; HET: ATP; 2.50A {Streptomyces venezuelae} SCOP: c.37.1.3 PDB: 1grr_A* 1grq_A 1qhs_A* 1qhn_A* 1qhy_A*
Probab=37.77 E-value=8.7 Score=34.10 Aligned_cols=17 Identities=18% Similarity=0.274 Sum_probs=14.1
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 49 CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm 65 (583)
..|+..|.+|||||+..
T Consensus 4 ~~i~l~G~~GsGKST~a 20 (178)
T 1qhx_A 4 RMIILNGGSSAGKSGIV 20 (178)
T ss_dssp CEEEEECCTTSSHHHHH
T ss_pred eEEEEECCCCCCHHHHH
Confidence 36888999999998754
No 262
>1ly1_A Polynucleotide kinase; PNK, phosphatase, transferase; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1
Probab=37.75 E-value=8.8 Score=33.99 Aligned_cols=16 Identities=25% Similarity=0.453 Sum_probs=13.3
Q ss_pred eEEEeeccCCCceEEe
Q psy9448 50 TVFAYGQTGTGKTFTM 65 (583)
Q Consensus 50 ~i~ayGqtgSGKT~Tm 65 (583)
.|+..|.+|||||+..
T Consensus 4 ~I~i~G~~GsGKST~a 19 (181)
T 1ly1_A 4 IILTIGCPGSGKSTWA 19 (181)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred EEEEecCCCCCHHHHH
Confidence 5788999999998743
No 263
>3pey_A ATP-dependent RNA helicase DBP5; RECA, DEAD-BOX, ATPase, helicase, mRNA-export, nuclear pore, hydrolase-RNA complex; HET: ADP; 1.40A {Saccharomyces cerevisiae} PDB: 3pew_A* 3pex_A* 3pez_A* 3rrm_A* 3rrn_A* 2kbe_A 3gfp_A 2kbf_A 3pev_A* 3peu_A*
Probab=37.73 E-value=13 Score=37.38 Aligned_cols=27 Identities=30% Similarity=0.342 Sum_probs=20.2
Q ss_pred hHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 418 LIDEVLSGYNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 418 ~v~~~l~G~n~~i~ayGqtgsGKT~Tm 444 (583)
.+..+++|-.-.++..++||||||.+.
T Consensus 35 ~i~~~~~~~~~~~lv~a~TGsGKT~~~ 61 (395)
T 3pey_A 35 ALPLLLHNPPRNMIAQSQSGTGKTAAF 61 (395)
T ss_dssp HHHHHHCSSCCCEEEECCTTSCHHHHH
T ss_pred HHHHHHcCCCCeEEEECCCCCcHHHHH
Confidence 455667774456788999999999753
No 264
>2gk6_A Regulator of nonsense transcripts 1; UPF1, helicase, NMD, hydrolase; HET: ADP; 2.40A {Homo sapiens} PDB: 2gjk_A* 2gk7_A 2xzo_A* 2xzp_A
Probab=37.69 E-value=8.7 Score=42.34 Aligned_cols=27 Identities=33% Similarity=0.400 Sum_probs=19.3
Q ss_pred hHHHHhcccceeEEEeeccCCCceEEeec
Q psy9448 39 LIDEVLSGYNCTVFAYGQTGTGKTFTMEG 67 (583)
Q Consensus 39 lv~~~l~G~n~~i~ayGqtgSGKT~Tm~G 67 (583)
.|..++. +...+..|++|||||+|+..
T Consensus 188 av~~~l~--~~~~li~GppGTGKT~~~~~ 214 (624)
T 2gk6_A 188 AVKTVLQ--RPLSLIQGPPGTGKTVTSAT 214 (624)
T ss_dssp HHHHHHT--CSEEEEECCTTSCHHHHHHH
T ss_pred HHHHHhc--CCCeEEECCCCCCHHHHHHH
Confidence 4555554 33567899999999999743
No 265
>3sop_A Neuronal-specific septin-3; hydrolase; HET: GDP; 2.88A {Homo sapiens}
Probab=37.68 E-value=7.2 Score=38.08 Aligned_cols=19 Identities=26% Similarity=0.635 Sum_probs=15.5
Q ss_pred cceeEEEeeccCCCceEEe
Q psy9448 47 YNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 47 ~n~~i~ayGqtgSGKT~Tm 65 (583)
|+-++...|++|+|||..|
T Consensus 1 f~f~v~lvG~nGaGKSTLl 19 (270)
T 3sop_A 1 FDFNIMVVGQSGLGKSTLV 19 (270)
T ss_dssp CEEEEEEEESSSSSHHHHH
T ss_pred CeeEEEEECCCCCCHHHHH
Confidence 3557788999999999765
No 266
>3tau_A Guanylate kinase, GMP kinase; structural genomics, center for structural genomics of infec diseases, csgid, putative guanylate kinase; HET: MSE; 2.05A {Listeria monocytogenes}
Probab=37.67 E-value=7.2 Score=36.13 Aligned_cols=17 Identities=24% Similarity=0.327 Sum_probs=14.0
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 49 CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm 65 (583)
..|.-.|++|||||.++
T Consensus 9 ~~i~l~GpsGsGKsTl~ 25 (208)
T 3tau_A 9 LLIVLSGPSGVGKGTVR 25 (208)
T ss_dssp CEEEEECCTTSCHHHHH
T ss_pred cEEEEECcCCCCHHHHH
Confidence 35667899999999876
No 267
>1um8_A ATP-dependent CLP protease ATP-binding subunit CL; CLPP binding loop, chaperone; HET: ADP; 2.60A {Helicobacter pylori} SCOP: c.37.1.20
Probab=37.38 E-value=8.3 Score=39.27 Aligned_cols=18 Identities=33% Similarity=0.641 Sum_probs=15.4
Q ss_pred ceeEEEeeccCCCceEEe
Q psy9448 48 NCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 48 n~~i~ayGqtgSGKT~Tm 65 (583)
...|+-||++|+|||+..
T Consensus 72 ~~~ill~Gp~GtGKT~la 89 (376)
T 1um8_A 72 KSNILLIGPTGSGKTLMA 89 (376)
T ss_dssp CCCEEEECCTTSSHHHHH
T ss_pred CCCEEEECCCCCCHHHHH
Confidence 456899999999999766
No 268
>3pfi_A Holliday junction ATP-dependent DNA helicase RUVB; probable holliday junction DNA helicase; HET: ADP; 2.69A {Campylobacter jejuni subsp}
Probab=37.29 E-value=11 Score=37.49 Aligned_cols=20 Identities=25% Similarity=0.227 Sum_probs=16.2
Q ss_pred ccceeEEEeeccCCCceEEe
Q psy9448 425 GYNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 425 G~n~~i~ayGqtgsGKT~Tm 444 (583)
+....++-||++|+|||+..
T Consensus 53 ~~~~~vll~G~~GtGKT~la 72 (338)
T 3pfi_A 53 ECLDHILFSGPAGLGKTTLA 72 (338)
T ss_dssp SCCCCEEEECSTTSSHHHHH
T ss_pred CCCCeEEEECcCCCCHHHHH
Confidence 34467999999999999765
No 269
>1ofh_A ATP-dependent HSL protease ATP-binding subunit HSLU; chaperone, hydrolase, ATP-binding; HET: ADP; 2.5A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1ofi_A*
Probab=37.03 E-value=8.2 Score=37.63 Aligned_cols=18 Identities=33% Similarity=0.429 Sum_probs=15.2
Q ss_pred ceeEEEeeccCCCceEEe
Q psy9448 427 NCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 427 n~~i~ayGqtgsGKT~Tm 444 (583)
...++-||++|+|||+..
T Consensus 50 ~~~vll~G~~GtGKT~la 67 (310)
T 1ofh_A 50 PKNILMIGPTGVGKTEIA 67 (310)
T ss_dssp CCCEEEECCTTSSHHHHH
T ss_pred CceEEEECCCCCCHHHHH
Confidence 457889999999999765
No 270
>2dr3_A UPF0273 protein PH0284; RECA superfamily ATPase, hexamer, structural genomics; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=37.02 E-value=15 Score=34.30 Aligned_cols=29 Identities=41% Similarity=0.574 Sum_probs=21.1
Q ss_pred hhhHHHHhcc-c--ceeEEEeeccCCCceEEe
Q psy9448 37 NPLIDEVLSG-Y--NCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 37 ~plv~~~l~G-~--n~~i~ayGqtgSGKT~Tm 65 (583)
-+-++.++.| + ...++-+|++|+|||..+
T Consensus 9 ~~~LD~~l~gGl~~G~~~~i~G~~GsGKTtl~ 40 (247)
T 2dr3_A 9 IPGVDEILHGGIPERNVVLLSGGPGTGKTIFS 40 (247)
T ss_dssp CTTHHHHTTTSEETTCEEEEEECTTSSHHHHH
T ss_pred chhHHHHcCCCCCCCcEEEEECCCCCCHHHHH
Confidence 3556777643 3 346788999999999875
No 271
>1sxj_E Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=36.76 E-value=5.7 Score=39.87 Aligned_cols=15 Identities=40% Similarity=0.733 Sum_probs=13.9
Q ss_pred EEEeeccCCCceEEe
Q psy9448 51 VFAYGQTGTGKTFTM 65 (583)
Q Consensus 51 i~ayGqtgSGKT~Tm 65 (583)
++-||++|+|||+++
T Consensus 39 ~ll~Gp~G~GKTtl~ 53 (354)
T 1sxj_E 39 LLLYGPNGTGKKTRC 53 (354)
T ss_dssp EEEECSTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 888999999999887
No 272
>2j0s_A ATP-dependent RNA helicase DDX48; mRNA processing, phosphorylation, rRNA processing, mRNA splicing, mRNA transport; HET: ANP; 2.21A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 2j0q_A* 2hyi_C* 3ex7_C* 2xb2_A* 2hxy_A 2j0u_A 2j0u_B 2zu6_A
Probab=36.75 E-value=14 Score=37.73 Aligned_cols=25 Identities=44% Similarity=0.679 Sum_probs=19.0
Q ss_pred hHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 418 LIDEVLSGYNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 418 ~v~~~l~G~n~~i~ayGqtgsGKT~Tm 444 (583)
.+..+++|.+ ++..++||||||.+.
T Consensus 67 ai~~i~~~~~--~lv~a~TGsGKT~~~ 91 (410)
T 2j0s_A 67 AIKQIIKGRD--VIAQSQSGTGKTATF 91 (410)
T ss_dssp HHHHHHTTCC--EEEECCTTSSHHHHH
T ss_pred HHHHHhCCCC--EEEECCCCCCchHHH
Confidence 4555677766 678899999999654
No 273
>2oap_1 GSPE-2, type II secretion system protein; hexameric ATPase, hydrolase; HET: ANP; 2.95A {Archaeoglobus fulgidus} PDB: 2oaq_1
Probab=36.72 E-value=9.6 Score=40.95 Aligned_cols=21 Identities=29% Similarity=0.495 Sum_probs=16.1
Q ss_pred hcccceeEEEeeccCCCceEEee
Q psy9448 423 LSGYNCTVFAYGQTGTGKTFTME 445 (583)
Q Consensus 423 l~G~n~~i~ayGqtgsGKT~Tm~ 445 (583)
-.|.+ +.-.|+||||||.+|.
T Consensus 258 ~~g~~--i~I~GptGSGKTTlL~ 278 (511)
T 2oap_1 258 EHKFS--AIVVGETASGKTTTLN 278 (511)
T ss_dssp HTTCC--EEEEESTTSSHHHHHH
T ss_pred hCCCE--EEEECCCCCCHHHHHH
Confidence 34655 6778999999997763
No 274
>1fuu_A Yeast initiation factor 4A; IF4A, helicase, DEAD-box protein, translation; 2.50A {Saccharomyces cerevisiae} SCOP: c.37.1.19 PDB: 2vso_A* 2vsx_A*
Probab=36.65 E-value=9.4 Score=38.53 Aligned_cols=26 Identities=42% Similarity=0.542 Sum_probs=19.3
Q ss_pred hhHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 38 PLIDEVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 38 plv~~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
..+..+++|.+ ++..++||||||.+.
T Consensus 50 ~~i~~i~~~~~--~lv~~~TGsGKT~~~ 75 (394)
T 1fuu_A 50 RAIMPIIEGHD--VLAQAQSGTGKTGTF 75 (394)
T ss_dssp HHHHHHHHTCC--EEECCCSSHHHHHHH
T ss_pred HHHHHHhCCCC--EEEECCCCChHHHHH
Confidence 34566777866 467789999999763
No 275
>1gvn_B Zeta; postsegregational killing system, plasmid; 1.95A {Streptococcus pyogenes} SCOP: c.37.1.21 PDB: 3q8x_B*
Probab=36.37 E-value=16 Score=35.75 Aligned_cols=29 Identities=31% Similarity=0.485 Sum_probs=18.9
Q ss_pred hhhhHHHHhccc-----ceeEEEeeccCCCceEE
Q psy9448 415 VNPLIDEVLSGY-----NCTVFAYGQTGTGKTFT 443 (583)
Q Consensus 415 ~~~~v~~~l~G~-----n~~i~ayGqtgsGKT~T 443 (583)
+...+...+.++ ...|+..|++|||||..
T Consensus 16 ~~~~~~~~l~~~~~~~~~~livl~G~sGsGKSTl 49 (287)
T 1gvn_B 16 LNDNLEELIQGKKAVESPTAFLLGGQPGSGKTSL 49 (287)
T ss_dssp HHHHHHHHHTTCCCCSSCEEEEEECCTTSCTHHH
T ss_pred HHHHHHHHhccccCCCCCeEEEEECCCCCCHHHH
Confidence 344444444432 35688899999999954
No 276
>3nbx_X ATPase RAVA; AAA+ ATPase, alpha-beta-alpha structure, rossman fold, hydro; HET: ADP; 2.91A {Escherichia coli}
Probab=36.37 E-value=12 Score=40.15 Aligned_cols=30 Identities=27% Similarity=0.413 Sum_probs=20.7
Q ss_pred hhhhHHHHhcccceeEEEeeccCCCceEEeec
Q psy9448 36 VNPLIDEVLSGYNCTVFAYGQTGTGKTFTMEG 67 (583)
Q Consensus 36 ~~plv~~~l~G~n~~i~ayGqtgSGKT~Tm~G 67 (583)
++-++..+..|. .|+-||++|+|||+..-.
T Consensus 31 i~~l~~al~~~~--~VLL~GpPGtGKT~LAra 60 (500)
T 3nbx_X 31 IRLCLLAALSGE--SVFLLGPPGIAKSLIARR 60 (500)
T ss_dssp HHHHHHHHHHTC--EEEEECCSSSSHHHHHHH
T ss_pred HHHHHHHHhcCC--eeEeecCchHHHHHHHHH
Confidence 334444455554 578899999999987643
No 277
>1lvg_A Guanylate kinase, GMP kinase; transferase; HET: ADP 5GP; 2.10A {Mus musculus} SCOP: c.37.1.1
Probab=36.30 E-value=6.4 Score=36.23 Aligned_cols=16 Identities=31% Similarity=0.546 Sum_probs=13.4
Q ss_pred eEEEeeccCCCceEEe
Q psy9448 50 TVFAYGQTGTGKTFTM 65 (583)
Q Consensus 50 ~i~ayGqtgSGKT~Tm 65 (583)
.+.-.|++|||||.++
T Consensus 6 ~i~lvGpsGaGKSTLl 21 (198)
T 1lvg_A 6 PVVLSGPSGAGKSTLL 21 (198)
T ss_dssp CEEEECCTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4567799999999877
No 278
>3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii}
Probab=36.20 E-value=9.6 Score=34.13 Aligned_cols=16 Identities=31% Similarity=0.509 Sum_probs=13.2
Q ss_pred eEEEeeccCCCceEEe
Q psy9448 50 TVFAYGQTGTGKTFTM 65 (583)
Q Consensus 50 ~i~ayGqtgSGKT~Tm 65 (583)
.|+..|.+|||||+.-
T Consensus 7 ~i~l~G~~GsGKst~a 22 (185)
T 3trf_A 7 NIYLIGLMGAGKTSVG 22 (185)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 5778899999998643
No 279
>3vfd_A Spastin; ATPase, microtubule severing, hydrolase; 3.30A {Homo sapiens}
Probab=36.18 E-value=9.2 Score=39.25 Aligned_cols=18 Identities=28% Similarity=0.549 Sum_probs=15.5
Q ss_pred ceeEEEeeccCCCceEEe
Q psy9448 48 NCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 48 n~~i~ayGqtgSGKT~Tm 65 (583)
...|+-||++|+|||+..
T Consensus 148 ~~~vLL~GppGtGKT~la 165 (389)
T 3vfd_A 148 ARGLLLFGPPGNGKTMLA 165 (389)
T ss_dssp CSEEEEESSTTSCHHHHH
T ss_pred CceEEEECCCCCCHHHHH
Confidence 357999999999999766
No 280
>3h1t_A Type I site-specific restriction-modification system, R (restriction) subunit; hydrolase, restriction enzyme HSDR, ATP-binding; 2.30A {Vibrio vulnificus}
Probab=36.14 E-value=9.6 Score=41.43 Aligned_cols=28 Identities=32% Similarity=0.369 Sum_probs=18.4
Q ss_pred hhHHHHhcccceeEEEeeccCCCceEEee
Q psy9448 417 PLIDEVLSGYNCTVFAYGQTGTGKTFTME 445 (583)
Q Consensus 417 ~~v~~~l~G~n~~i~ayGqtgsGKT~Tm~ 445 (583)
.+++.+.+|..-.++ .++||||||.++.
T Consensus 189 ~~~~~~~~~~~~~ll-~~~TGsGKT~~~~ 216 (590)
T 3h1t_A 189 RAVQSVLQGKKRSLI-TMATGTGKTVVAF 216 (590)
T ss_dssp HHHHHHHTTCSEEEE-EECTTSCHHHHHH
T ss_pred HHHHHHhcCCCceEE-EecCCCChHHHHH
Confidence 344444556554444 4999999999864
No 281
>1ye8_A Protein THEP1, hypothetical UPF0334 kinase-like protein AQ_1292; mixed alpha-beta protein, rossman fold, signaling protein, transferase; 1.40A {Aquifex aeolicus} SCOP: c.37.1.11
Probab=36.13 E-value=6.6 Score=35.68 Aligned_cols=15 Identities=33% Similarity=0.596 Sum_probs=12.8
Q ss_pred EEEeeccCCCceEEe
Q psy9448 51 VFAYGQTGTGKTFTM 65 (583)
Q Consensus 51 i~ayGqtgSGKT~Tm 65 (583)
+.-.|++|||||+.+
T Consensus 3 i~l~G~nGsGKTTLl 17 (178)
T 1ye8_A 3 IIITGEPGVGKTTLV 17 (178)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 456899999999877
No 282
>2orw_A Thymidine kinase; TMTK, TP4A, transferase; HET: 4TA; 1.50A {Thermotoga maritima} PDB: 2qpo_A 2qq0_A* 2qqe_A*
Probab=36.13 E-value=6 Score=36.17 Aligned_cols=18 Identities=22% Similarity=0.183 Sum_probs=15.2
Q ss_pred eEEEeeccCCCceEEeec
Q psy9448 50 TVFAYGQTGTGKTFTMEG 67 (583)
Q Consensus 50 ~i~ayGqtgSGKT~Tm~G 67 (583)
.++-+|+.|+|||+.+.+
T Consensus 5 i~vi~G~~gsGKTT~ll~ 22 (184)
T 2orw_A 5 LTVITGPMYSGKTTELLS 22 (184)
T ss_dssp EEEEEESTTSSHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHH
Confidence 467899999999998854
No 283
>4b4t_H 26S protease regulatory subunit 7 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=35.86 E-value=9.7 Score=40.29 Aligned_cols=48 Identities=27% Similarity=0.295 Sum_probs=26.6
Q ss_pred ehhhcccCCceEEEeehhhhhhHH-HHhccc----ceeEEEeeccCCCceEEe
Q psy9448 18 MFLVCIFYTTIVDVYKYVVNPLID-EVLSGY----NCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 18 ~D~Vf~~~~tq~~vy~~~~~plv~-~~l~G~----n~~i~ayGqtgSGKT~Tm 65 (583)
||.|-+.+..-+++-+.+.-|+.. ..+.++ --.|+-||+.|+|||.+.
T Consensus 208 ~~DIgGl~~~k~~L~e~V~~pl~~pe~f~~~Gi~pprGILLyGPPGTGKTlLA 260 (467)
T 4b4t_H 208 YSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCA 260 (467)
T ss_dssp CSSCTTCHHHHHHHHHHTHHHHHCHHHHHHHTCCCCSEEEECSCTTSSHHHHH
T ss_pred HHHhccHHHHHHHHHHHHHHHhcCHHHHHHCCCCCCCceEeeCCCCCcHHHHH
Confidence 344444433333344444444433 234333 356999999999998543
No 284
>1hqc_A RUVB; extended AAA-ATPase domain, complex with nucleotide, hydrolase; HET: ADE; 3.20A {Thermus thermophilus} SCOP: a.4.5.11 c.37.1.20 PDB: 1ixs_B* 1ixr_C*
Probab=35.77 E-value=9.1 Score=37.71 Aligned_cols=19 Identities=26% Similarity=0.321 Sum_probs=16.0
Q ss_pred cceeEEEeeccCCCceEEe
Q psy9448 47 YNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 47 ~n~~i~ayGqtgSGKT~Tm 65 (583)
....|+-||++|+|||+..
T Consensus 37 ~~~~vll~G~~GtGKT~la 55 (324)
T 1hqc_A 37 PLEHLLLFGPPGLGKTTLA 55 (324)
T ss_dssp CCCCCEEECCTTCCCHHHH
T ss_pred CCCcEEEECCCCCCHHHHH
Confidence 4467889999999999776
No 285
>3u61_B DNA polymerase accessory protein 44; AAA+, ATP hydrolase, clamp loader, sliding clamp, primer-TEM DNA, DNA binding protein-DNA complex; HET: DNA ADP 08T; 3.20A {Enterobacteria phage T4} PDB: 3u5z_B* 3u60_B*
Probab=35.68 E-value=11 Score=37.31 Aligned_cols=19 Identities=26% Similarity=0.317 Sum_probs=15.1
Q ss_pred ceeEEEeeccCCCceEEee
Q psy9448 427 NCTVFAYGQTGTGKTFTME 445 (583)
Q Consensus 427 n~~i~ayGqtgsGKT~Tm~ 445 (583)
...++-||++|+|||+++.
T Consensus 48 ~~~~L~~G~~G~GKT~la~ 66 (324)
T 3u61_B 48 PHIILHSPSPGTGKTTVAK 66 (324)
T ss_dssp CSEEEECSSTTSSHHHHHH
T ss_pred CeEEEeeCcCCCCHHHHHH
Confidence 3567888999999998764
No 286
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=35.61 E-value=6.6 Score=37.28 Aligned_cols=20 Identities=25% Similarity=0.192 Sum_probs=16.6
Q ss_pred ceeEEEeeccCCCceEEeec
Q psy9448 48 NCTVFAYGQTGTGKTFTMEG 67 (583)
Q Consensus 48 n~~i~ayGqtgSGKT~Tm~G 67 (583)
...++-+|++|+|||..+.+
T Consensus 12 G~i~litG~mGsGKTT~ll~ 31 (223)
T 2b8t_A 12 GWIEFITGPMFAGKTAELIR 31 (223)
T ss_dssp CEEEEEECSTTSCHHHHHHH
T ss_pred cEEEEEECCCCCcHHHHHHH
Confidence 35678899999999988865
No 287
>1iqp_A RFCS; clamp loader, extended AAA-ATPase domain, complex with ADP, replication; HET: ADP; 2.80A {Pyrococcus furiosus} SCOP: a.80.1.1 c.37.1.20
Probab=35.55 E-value=14 Score=36.28 Aligned_cols=22 Identities=27% Similarity=0.318 Sum_probs=16.8
Q ss_pred hcccceeEEEeeccCCCceEEe
Q psy9448 423 LSGYNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 423 l~G~n~~i~ayGqtgsGKT~Tm 444 (583)
-.|....++-||+.|+|||++.
T Consensus 42 ~~~~~~~~ll~G~~G~GKT~la 63 (327)
T 1iqp_A 42 KTGSMPHLLFAGPPGVGKTTAA 63 (327)
T ss_dssp HHTCCCEEEEESCTTSSHHHHH
T ss_pred HcCCCCeEEEECcCCCCHHHHH
Confidence 3454445899999999999765
No 288
>4fcw_A Chaperone protein CLPB; AAA domain; HET: ADP; 2.35A {Thermus thermophilus} PDB: 4fcv_A* 4fd2_A* 4fct_A*
Probab=35.22 E-value=11 Score=36.71 Aligned_cols=17 Identities=35% Similarity=0.417 Sum_probs=14.7
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 428 CTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 428 ~~i~ayGqtgsGKT~Tm 444 (583)
..++-+|++|+|||++.
T Consensus 48 ~~~ll~G~~GtGKt~la 64 (311)
T 4fcw_A 48 GSFLFLGPTGVGKTELA 64 (311)
T ss_dssp EEEEEESCSSSSHHHHH
T ss_pred eEEEEECCCCcCHHHHH
Confidence 57899999999999665
No 289
>1rj9_A FTSY, signal recognition protein; SRP-GTPase domain, heterodimer, nucleotide twinning, protein complex, protein transport; HET: GCP; 1.90A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 2q9c_A* 2q9b_A* 2q9a_A* 1okk_D* 2xkv_D 2iyl_D* 2cnw_D* 2j7p_D*
Probab=34.93 E-value=8.4 Score=38.36 Aligned_cols=17 Identities=41% Similarity=0.579 Sum_probs=14.4
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 49 CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm 65 (583)
..|.-.|++|||||.++
T Consensus 103 ~vi~lvG~nGsGKTTll 119 (304)
T 1rj9_A 103 RVVLVVGVNGVGKTTTI 119 (304)
T ss_dssp SEEEEECSTTSSHHHHH
T ss_pred eEEEEECCCCCcHHHHH
Confidence 46667799999999988
No 290
>3iij_A Coilin-interacting nuclear ATPase protein; alpha and beta proteins (A/B), protein binding, transferase, phosphotransferase; HET: ADP; 1.76A {Homo sapiens} SCOP: c.37.1.1 PDB: 3iik_A 3iil_A* 3iim_A* 1rkb_A
Probab=34.75 E-value=9.8 Score=33.99 Aligned_cols=17 Identities=29% Similarity=0.354 Sum_probs=14.0
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 49 CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm 65 (583)
..|+..|.+|||||+..
T Consensus 12 ~~i~i~G~~GsGKst~~ 28 (180)
T 3iij_A 12 PNILLTGTPGVGKTTLG 28 (180)
T ss_dssp CCEEEECSTTSSHHHHH
T ss_pred CeEEEEeCCCCCHHHHH
Confidence 35788999999998755
No 291
>3oiy_A Reverse gyrase helicase domain; topoisomerase, DNA supercoiling, archaea, isomeras; 2.35A {Thermotoga maritima} PDB: 3p4y_A 3p4x_A*
Probab=34.65 E-value=13 Score=38.22 Aligned_cols=24 Identities=25% Similarity=0.325 Sum_probs=18.3
Q ss_pred hHHHHhcccceeEEEeeccCCCceEE
Q psy9448 418 LIDEVLSGYNCTVFAYGQTGTGKTFT 443 (583)
Q Consensus 418 ~v~~~l~G~n~~i~ayGqtgsGKT~T 443 (583)
.+..+++|.+ ++..++||||||..
T Consensus 29 ~i~~i~~~~~--~lv~apTGsGKT~~ 52 (414)
T 3oiy_A 29 WAKRIVQGKS--FTMVAPTGVGKTTF 52 (414)
T ss_dssp HHHHHTTTCC--EECCSCSSSSHHHH
T ss_pred HHHHHhcCCC--EEEEeCCCCCHHHH
Confidence 4555667764 68899999999973
No 292
>2ykg_A Probable ATP-dependent RNA helicase DDX58; hydrolase, innate immunity; 2.50A {Homo sapiens} PDB: 3tmi_A*
Probab=34.64 E-value=15 Score=40.52 Aligned_cols=25 Identities=36% Similarity=0.500 Sum_probs=19.2
Q ss_pred hhHHHHhcccceeEEEeeccCCCceEE
Q psy9448 38 PLIDEVLSGYNCTVFAYGQTGTGKTFT 64 (583)
Q Consensus 38 plv~~~l~G~n~~i~ayGqtgSGKT~T 64 (583)
.++..+++|.| ++..++||||||..
T Consensus 20 ~~i~~~l~g~~--~iv~~~TGsGKTl~ 44 (696)
T 2ykg_A 20 ELALPAMKGKN--TIICAPTGCGKTFV 44 (696)
T ss_dssp HHHHHHHTTCC--EEEECCTTSSHHHH
T ss_pred HHHHHHHcCCC--EEEEcCCCchHHHH
Confidence 35666778877 46778999999974
No 293
>4ag6_A VIRB4 ATPase, type IV secretory pathway VIRB4 components-like P; hydrolase, type IV secretion, conjugation; 2.35A {Thermoanaerobacter pseudethanolicus} PDB: 4ag5_A
Probab=34.60 E-value=7.4 Score=39.96 Aligned_cols=19 Identities=32% Similarity=0.462 Sum_probs=15.2
Q ss_pred cceeEEEeeccCCCceEEe
Q psy9448 47 YNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 47 ~n~~i~ayGqtgSGKT~Tm 65 (583)
.|.-++..|++|||||+++
T Consensus 34 ~~~~~~i~G~~G~GKs~~~ 52 (392)
T 4ag6_A 34 TNSNWTILAKPGAGKSFTA 52 (392)
T ss_dssp CCCCEEEECCTTSSHHHHH
T ss_pred ccCceEEEcCCCCCHHHHH
Confidence 3445677899999999887
No 294
>3sqw_A ATP-dependent RNA helicase MSS116, mitochondrial; RECA fold, RNA dependent ATPase, RNA helicase; HET: ANP; 1.91A {Saccharomyces cerevisiae S288C}
Probab=34.44 E-value=17 Score=39.28 Aligned_cols=27 Identities=44% Similarity=0.599 Sum_probs=19.9
Q ss_pred hhHHHHhcccceeEEEeeccCCCceEE
Q psy9448 38 PLIDEVLSGYNCTVFAYGQTGTGKTFT 64 (583)
Q Consensus 38 plv~~~l~G~n~~i~ayGqtgSGKT~T 64 (583)
.++..++.|-+--+++.++||||||.+
T Consensus 50 ~~i~~il~~~~~dvlv~apTGsGKTl~ 76 (579)
T 3sqw_A 50 KTIKPILSSEDHDVIARAKTGTGKTFA 76 (579)
T ss_dssp HHHHHHHCSSSEEEEEECCTTSCHHHH
T ss_pred HHHHHHHccCCCeEEEEcCCCcHHHHH
Confidence 356667755445668889999999975
No 295
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=34.35 E-value=10 Score=39.78 Aligned_cols=17 Identities=29% Similarity=0.700 Sum_probs=15.0
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 49 CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm 65 (583)
..|+-||++|+|||+..
T Consensus 168 ~~vLL~GppGtGKT~lA 184 (444)
T 2zan_A 168 RGILLFGPPGTGKSYLA 184 (444)
T ss_dssp SEEEEECSTTSSHHHHH
T ss_pred ceEEEECCCCCCHHHHH
Confidence 56899999999999876
No 296
>3i5x_A ATP-dependent RNA helicase MSS116; protein-RNA complex, RNA helicase, DEAD-BOX, ATP-binding, HE hydrolase, mitochondrion; HET: ANP; 1.90A {Saccharomyces cerevisiae} PDB: 3i5y_A* 3i61_A* 3i62_A* 3sqx_A* 4db2_A 4db4_A
Probab=34.30 E-value=17 Score=39.03 Aligned_cols=27 Identities=44% Similarity=0.599 Sum_probs=20.7
Q ss_pred hhHHHHhcccceeEEEeeccCCCceEE
Q psy9448 417 PLIDEVLSGYNCTVFAYGQTGTGKTFT 443 (583)
Q Consensus 417 ~~v~~~l~G~n~~i~ayGqtgsGKT~T 443 (583)
..+..++.|-+-.++..++||||||.+
T Consensus 101 ~~i~~~l~~~~~~~lv~apTGsGKTl~ 127 (563)
T 3i5x_A 101 KTIKPILSSEDHDVIARAKTGTGKTFA 127 (563)
T ss_dssp HHHHHHHSSSSEEEEEECCTTSCHHHH
T ss_pred HHHHHHhcCCCCeEEEECCCCCCccHH
Confidence 345566766566789999999999975
No 297
>1s2m_A Putative ATP-dependent RNA helicase DHH1; ATP-binding, RNA-binding, RNA binding protein; 2.10A {Saccharomyces cerevisiae} SCOP: c.37.1.19 c.37.1.19 PDB: 2wax_A* 2way_A
Probab=34.01 E-value=15 Score=37.19 Aligned_cols=25 Identities=32% Similarity=0.549 Sum_probs=18.7
Q ss_pred hHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 418 LIDEVLSGYNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 418 ~v~~~l~G~n~~i~ayGqtgsGKT~Tm 444 (583)
.+..+++|.+ ++..++||||||.+.
T Consensus 51 ~i~~i~~~~~--~li~a~TGsGKT~~~ 75 (400)
T 1s2m_A 51 AIPVAITGRD--ILARAKNGTGKTAAF 75 (400)
T ss_dssp HHHHHHHTCC--EEEECCTTSCHHHHH
T ss_pred HHHHHhcCCC--EEEECCCCcHHHHHH
Confidence 4455667766 678899999999654
No 298
>3tbk_A RIG-I helicase domain; DECH helicase, ATP binding, hydrolase; HET: ANP; 2.14A {Mus musculus}
Probab=33.94 E-value=16 Score=38.65 Aligned_cols=25 Identities=36% Similarity=0.423 Sum_probs=19.0
Q ss_pred hHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 39 LIDEVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 39 lv~~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
.+..+++|.| ++..++||||||.+.
T Consensus 12 ~i~~~~~~~~--~l~~~~tGsGKT~~~ 36 (555)
T 3tbk_A 12 LALPAKKGKN--TIICAPTGCGKTFVS 36 (555)
T ss_dssp HHHHHHTTCC--EEEECCTTSCHHHHH
T ss_pred HHHHHhCCCC--EEEEeCCCChHHHHH
Confidence 4566778876 466789999999763
No 299
>3lfu_A DNA helicase II; SF1 helicase, ATP-binding, DNA damage, DNA REP replication, DNA-binding, hydrolase, nucleotide-B SOS response; HET: DNA; 1.80A {Escherichia coli} PDB: 2is6_A* 2is2_A* 2is1_A* 2is4_A*
Probab=33.92 E-value=10 Score=41.67 Aligned_cols=25 Identities=16% Similarity=0.295 Sum_probs=19.2
Q ss_pred HhcccceeEEEeeccCCCceEEeec
Q psy9448 43 VLSGYNCTVFAYGQTGTGKTFTMEG 67 (583)
Q Consensus 43 ~l~G~n~~i~ayGqtgSGKT~Tm~G 67 (583)
++.-.++.++..|..|||||+|+.-
T Consensus 17 av~~~~~~~lV~a~aGsGKT~~l~~ 41 (647)
T 3lfu_A 17 AVAAPRSNLLVLAGAGSGKTRVLVH 41 (647)
T ss_dssp HHTCCSSCEEEEECTTSCHHHHHHH
T ss_pred HHhCCCCCEEEEECCCCCHHHHHHH
Confidence 3334466788999999999999853
No 300
>4gl2_A Interferon-induced helicase C domain-containing P; MDA5, dsRNA, anti-viral signaling, RIG-I, MAVS, oligomerizat helicase, ATPase; HET: ANP; 3.56A {Homo sapiens}
Probab=33.91 E-value=15 Score=40.54 Aligned_cols=26 Identities=31% Similarity=0.369 Sum_probs=20.3
Q ss_pred hhHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 38 PLIDEVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 38 plv~~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
.+++.+++|.+ ++..++||||||.+.
T Consensus 14 ~~i~~il~g~~--~ll~~~TGsGKTl~~ 39 (699)
T 4gl2_A 14 EVAQPALEGKN--IIICLPTGCGKTRVA 39 (699)
T ss_dssp HHHHHHHSSCC--EEECCCTTSCHHHHH
T ss_pred HHHHHHHhCCC--EEEEcCCCCcHHHHH
Confidence 45677778876 577899999999764
No 301
>1hv8_A Putative ATP-dependent RNA helicase MJ0669; RNA-binding protein, ATPase, RNA binding protein; 3.00A {Methanocaldococcus jannaschii} SCOP: c.37.1.19 c.37.1.19
Probab=33.83 E-value=17 Score=36.08 Aligned_cols=26 Identities=31% Similarity=0.429 Sum_probs=18.4
Q ss_pred hHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 39 LIDEVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 39 lv~~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
.+..+++|.. .++..++||||||.+.
T Consensus 36 ~i~~~~~~~~-~~l~~~~TGsGKT~~~ 61 (367)
T 1hv8_A 36 VIPLFLNDEY-NIVAQARTGSGKTASF 61 (367)
T ss_dssp HHHHHHHTCS-EEEEECCSSSSHHHHH
T ss_pred HHHHHhCCCC-CEEEECCCCChHHHHH
Confidence 4556666632 3567799999999874
No 302
>2jlq_A Serine protease subunit NS3; ribonucleoprotein, nucleotide-binding, viral nucleoprotein, endoplasmic reticulum, helicase, hydrolase; 1.67A {Dengue virus 4} PDB: 2jly_A* 2jls_A* 2jlu_A 2jlv_A* 2jlw_A 2jlx_A* 2jlz_A* 2jlr_A* 2bmf_A 2bhr_A
Probab=33.62 E-value=13 Score=39.14 Aligned_cols=25 Identities=16% Similarity=0.195 Sum_probs=18.6
Q ss_pred hHHHHhcccceeEEEeeccCCCceEE
Q psy9448 418 LIDEVLSGYNCTVFAYGQTGTGKTFT 443 (583)
Q Consensus 418 ~v~~~l~G~n~~i~ayGqtgsGKT~T 443 (583)
++..+++|.+ .++..++||||||..
T Consensus 11 ~i~~~l~~~~-~~lv~a~TGsGKT~~ 35 (451)
T 2jlq_A 11 VDEDIFRKKR-LTIMDLHPGAGKTKR 35 (451)
T ss_dssp CCGGGGSTTC-EEEECCCTTSSCCTT
T ss_pred HHHHHHhcCC-eEEEECCCCCCHhhH
Confidence 3455677765 457889999999975
No 303
>1njg_A DNA polymerase III subunit gamma; rossman-like fold, AAA+ ATPase domains, sensor 1, sensor 2, transferase; HET: DNA; 2.20A {Escherichia coli} SCOP: c.37.1.20 PDB: 1njf_A*
Probab=33.09 E-value=20 Score=32.74 Aligned_cols=17 Identities=29% Similarity=0.339 Sum_probs=14.7
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 428 CTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 428 ~~i~ayGqtgsGKT~Tm 444 (583)
..++-||+.|+|||+.+
T Consensus 46 ~~~ll~G~~G~GKT~l~ 62 (250)
T 1njg_A 46 HAYLFSGTRGVGKTSIA 62 (250)
T ss_dssp SEEEEECSTTSCHHHHH
T ss_pred eEEEEECCCCCCHHHHH
Confidence 46899999999999765
No 304
>1e9r_A Conjugal transfer protein TRWB; coupling protein, bacterial conjugation, F1-ATPase-like quaternary structure, ring helicases; 2.4A {Escherichia coli} SCOP: c.37.1.11 PDB: 1e9s_A 1gki_A* 1gl7_A* 1gl6_A*
Probab=33.07 E-value=8.3 Score=40.17 Aligned_cols=19 Identities=32% Similarity=0.480 Sum_probs=16.0
Q ss_pred cceeEEEeeccCCCceEEe
Q psy9448 47 YNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 47 ~n~~i~ayGqtgSGKT~Tm 65 (583)
.+.-++..|+||||||.++
T Consensus 52 ~~~h~~i~G~tGsGKs~~~ 70 (437)
T 1e9r_A 52 EPRHLLVNGATGTGKSVLL 70 (437)
T ss_dssp GGGCEEEEECTTSSHHHHH
T ss_pred CcceEEEECCCCCCHHHHH
Confidence 3567889999999999876
No 305
>3b9q_A Chloroplast SRP receptor homolog, alpha subunit CPFTSY; protein translocation, GTP-binding, nucleotide-binding, protein transport; 1.75A {Arabidopsis thaliana}
Probab=32.97 E-value=8.5 Score=38.26 Aligned_cols=17 Identities=29% Similarity=0.565 Sum_probs=14.8
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 49 CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm 65 (583)
..+.-.|++|||||.++
T Consensus 101 ~vi~lvG~nGsGKTTll 117 (302)
T 3b9q_A 101 AVIMIVGVNGGGKTTSL 117 (302)
T ss_dssp EEEEEECCTTSCHHHHH
T ss_pred cEEEEEcCCCCCHHHHH
Confidence 46778899999999988
No 306
>1qvr_A CLPB protein; coiled coil, AAA ATPase, chaperone; HET: ANP; 3.00A {Thermus thermophilus} SCOP: a.174.1.1 c.37.1.20 c.37.1.20
Probab=32.92 E-value=9.7 Score=43.66 Aligned_cols=44 Identities=25% Similarity=0.344 Sum_probs=29.8
Q ss_pred cccccccccccccceeehhhhhhhHHHHhcccceeEEEeeccCCCceEEeec
Q psy9448 395 FGFDRVFSQESKQVDVYKYVVNPLIDEVLSGYNCTVFAYGQTGTGKTFTMEG 446 (583)
Q Consensus 395 f~fD~vf~~~~~q~~vy~~~~~~~v~~~l~G~n~~i~ayGqtgsGKT~Tm~G 446 (583)
-.||.+.+.+ ..+..+++.+..+....++-||++|+|||+.+.+
T Consensus 167 ~~ld~viGr~--------~~i~~l~~~l~~~~~~~vlL~G~pG~GKT~la~~ 210 (854)
T 1qvr_A 167 GKLDPVIGRD--------EEIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEG 210 (854)
T ss_dssp TCSCCCCSCH--------HHHHHHHHHHHCSSCCCCEEEECTTSCHHHHHHH
T ss_pred CCCcccCCcH--------HHHHHHHHHHhcCCCCceEEEcCCCCCHHHHHHH
Confidence 4567666654 2344555555556556688899999999987755
No 307
>1zp6_A Hypothetical protein ATU3015; alpha-beta protein., structural genomics, PSI, protein struc initiative; 3.20A {Agrobacterium tumefaciens str} SCOP: c.37.1.25
Probab=32.90 E-value=12 Score=33.62 Aligned_cols=17 Identities=24% Similarity=0.434 Sum_probs=14.2
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 49 CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm 65 (583)
..|.-.|++|||||+.+
T Consensus 10 ~~i~l~G~~GsGKSTl~ 26 (191)
T 1zp6_A 10 NILLLSGHPGSGKSTIA 26 (191)
T ss_dssp EEEEEEECTTSCHHHHH
T ss_pred eEEEEECCCCCCHHHHH
Confidence 35778899999999876
No 308
>1hqc_A RUVB; extended AAA-ATPase domain, complex with nucleotide, hydrolase; HET: ADE; 3.20A {Thermus thermophilus} SCOP: a.4.5.11 c.37.1.20 PDB: 1ixs_B* 1ixr_C*
Probab=32.66 E-value=16 Score=35.94 Aligned_cols=19 Identities=26% Similarity=0.321 Sum_probs=15.7
Q ss_pred cceeEEEeeccCCCceEEe
Q psy9448 426 YNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 426 ~n~~i~ayGqtgsGKT~Tm 444 (583)
....++-||++|+|||+..
T Consensus 37 ~~~~vll~G~~GtGKT~la 55 (324)
T 1hqc_A 37 PLEHLLLFGPPGLGKTTLA 55 (324)
T ss_dssp CCCCCEEECCTTCCCHHHH
T ss_pred CCCcEEEECCCCCCHHHHH
Confidence 4467889999999999765
No 309
>3pxi_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 6.93A {Bacillus subtilis}
Probab=32.56 E-value=18 Score=40.66 Aligned_cols=32 Identities=25% Similarity=0.375 Sum_probs=23.3
Q ss_pred hhhhHHHHhcccceeEEEeeccCCCceEEeec
Q psy9448 36 VNPLIDEVLSGYNCTVFAYGQTGTGKTFTMEG 67 (583)
Q Consensus 36 ~~plv~~~l~G~n~~i~ayGqtgSGKT~Tm~G 67 (583)
++.++..+..+....++-||++|+|||....+
T Consensus 189 i~~l~~~l~~~~~~~vLL~G~pGtGKT~la~~ 220 (758)
T 3pxi_A 189 IQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEG 220 (758)
T ss_dssp HHHHHHHHHCSSSCEEEEESCTTTTTHHHHHH
T ss_pred HHHHHHHHhCCCCCCeEEECCCCCCHHHHHHH
Confidence 44455555556666789999999999987644
No 310
>2bdt_A BH3686; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG, function; 2.40A {Bacillus halodurans} SCOP: c.37.1.25
Probab=32.50 E-value=8.8 Score=34.63 Aligned_cols=16 Identities=31% Similarity=0.422 Sum_probs=13.3
Q ss_pred eEEEeeccCCCceEEe
Q psy9448 50 TVFAYGQTGTGKTFTM 65 (583)
Q Consensus 50 ~i~ayGqtgSGKT~Tm 65 (583)
.+.-.|++|||||+.+
T Consensus 4 ii~l~G~~GaGKSTl~ 19 (189)
T 2bdt_A 4 LYIITGPAGVGKSTTC 19 (189)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCCcHHHHH
Confidence 4567899999999876
No 311
>2z0m_A 337AA long hypothetical ATP-dependent RNA helicase DEAD; ATP-binding, hydrolase, nucleotide-binding, RNA binding protein, structural genomics; 1.90A {Sulfolobus tokodaii}
Probab=32.22 E-value=18 Score=35.35 Aligned_cols=26 Identities=38% Similarity=0.489 Sum_probs=18.6
Q ss_pred hHHHHhcccceeEEEeeccCCCceEEee
Q psy9448 418 LIDEVLSGYNCTVFAYGQTGTGKTFTME 445 (583)
Q Consensus 418 ~v~~~l~G~n~~i~ayGqtgsGKT~Tm~ 445 (583)
.+..+++|.+ ++..++||+|||.+..
T Consensus 24 ~i~~i~~~~~--~lv~~~TGsGKT~~~~ 49 (337)
T 2z0m_A 24 TIPLMLQGKN--VVVRAKTGSGKTAAYA 49 (337)
T ss_dssp HHHHHHTTCC--EEEECCTTSSHHHHHH
T ss_pred HHHHHhcCCC--EEEEcCCCCcHHHHHH
Confidence 4445566765 6778999999997543
No 312
>1znw_A Guanylate kinase, GMP kinase; ATP:GMP-phosphotransferase, TR; 2.10A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1znx_A* 1zny_A* 1znz_A* 1s4q_A 1z8f_A
Probab=32.11 E-value=9 Score=35.35 Aligned_cols=16 Identities=25% Similarity=0.407 Sum_probs=13.0
Q ss_pred eEEEeeccCCCceEEe
Q psy9448 50 TVFAYGQTGTGKTFTM 65 (583)
Q Consensus 50 ~i~ayGqtgSGKT~Tm 65 (583)
.+.-.|++|||||.++
T Consensus 22 i~~l~GpnGsGKSTLl 37 (207)
T 1znw_A 22 VVVLSGPSAVGKSTVV 37 (207)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4556799999999877
No 313
>2chq_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATP ATP-binding, nucleotide-binding; HET: ANP; 3.5A {Archaeoglobus fulgidus} PDB: 2chv_A
Probab=32.03 E-value=12 Score=36.48 Aligned_cols=21 Identities=33% Similarity=0.289 Sum_probs=16.2
Q ss_pred cccceeEEEeeccCCCceEEe
Q psy9448 424 SGYNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 424 ~G~n~~i~ayGqtgsGKT~Tm 444 (583)
.|....++-||+.|+|||+..
T Consensus 35 ~~~~~~~ll~G~~G~GKt~la 55 (319)
T 2chq_A 35 RKNIPHLLFSGPPGTGKTATA 55 (319)
T ss_dssp TTCCCCEEEESSSSSSHHHHH
T ss_pred CCCCCeEEEECcCCcCHHHHH
Confidence 344445899999999999765
No 314
>2ehv_A Hypothetical protein PH0186; KAIC, RECA ATPase, unknown function; HET: ADP; 2.07A {Pyrococcus horikoshii} PDB: 2zts_A*
Probab=31.90 E-value=9.4 Score=35.87 Aligned_cols=28 Identities=43% Similarity=0.602 Sum_probs=18.8
Q ss_pred hHHHHhc-cc--ceeEEEeeccCCCceEEee
Q psy9448 39 LIDEVLS-GY--NCTVFAYGQTGTGKTFTME 66 (583)
Q Consensus 39 lv~~~l~-G~--n~~i~ayGqtgSGKT~Tm~ 66 (583)
-++.++. |+ ...+.-.|++|||||..+.
T Consensus 18 ~lD~~l~Ggi~~G~~~~l~GpnGsGKSTLl~ 48 (251)
T 2ehv_A 18 GFDELIEGGFPEGTTVLLTGGTGTGKTTFAA 48 (251)
T ss_dssp TTGGGTTTSEETTCEEEEECCTTSSHHHHHH
T ss_pred hHHHHhcCCCCCCcEEEEEeCCCCCHHHHHH
Confidence 3455553 33 2456678999999998773
No 315
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=31.87 E-value=8.4 Score=36.71 Aligned_cols=19 Identities=37% Similarity=0.515 Sum_probs=16.5
Q ss_pred eeEEEeeccCCCceEEeec
Q psy9448 49 CTVFAYGQTGTGKTFTMEG 67 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm~G 67 (583)
..||..|..|+||||+|..
T Consensus 7 l~I~~~~kgGvGKTt~a~~ 25 (228)
T 2r8r_A 7 LKVFLGAAPGVGKTYAMLQ 25 (228)
T ss_dssp EEEEEESSTTSSHHHHHHH
T ss_pred EEEEEECCCCCcHHHHHHH
Confidence 4588999999999999864
No 316
>3lnc_A Guanylate kinase, GMP kinase; ALS collaborative crystallography, emerald biostructures, ATP-binding, cytoplasm, nucleotide-binding; HET: 5GP; 1.95A {Anaplasma phagocytophilum}
Probab=31.78 E-value=11 Score=35.41 Aligned_cols=16 Identities=25% Similarity=0.322 Sum_probs=9.2
Q ss_pred eEEEeeccCCCceEEe
Q psy9448 50 TVFAYGQTGTGKTFTM 65 (583)
Q Consensus 50 ~i~ayGqtgSGKT~Tm 65 (583)
.|.-.|++|||||.++
T Consensus 29 ii~l~Gp~GsGKSTl~ 44 (231)
T 3lnc_A 29 ILVLSSPSGCGKTTVA 44 (231)
T ss_dssp EEEEECSCC----CHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4556799999999876
No 317
>1kag_A SKI, shikimate kinase I; transferase, structural genomics, PSI, protein structure initiative; 2.05A {Escherichia coli} SCOP: c.37.1.2
Probab=31.77 E-value=12 Score=33.07 Aligned_cols=16 Identities=31% Similarity=0.549 Sum_probs=13.5
Q ss_pred eEEEeeccCCCceEEe
Q psy9448 50 TVFAYGQTGTGKTFTM 65 (583)
Q Consensus 50 ~i~ayGqtgSGKT~Tm 65 (583)
.|.-.|++|||||+..
T Consensus 6 ~i~l~G~~GsGKSTl~ 21 (173)
T 1kag_A 6 NIFLVGPMGAGKSTIG 21 (173)
T ss_dssp CEEEECCTTSCHHHHH
T ss_pred eEEEECCCCCCHHHHH
Confidence 5778999999999765
No 318
>1in4_A RUVB, holliday junction DNA helicase RUVB; AAA+-class ATPase, winged-helix domain, ATP hydrolysis, walker A, walker B, sensor 1, sensor 2; HET: ADP; 1.60A {Thermotoga maritima} SCOP: a.4.5.11 c.37.1.20 PDB: 1in5_A* 1in6_A* 1in8_A* 1in7_A* 1j7k_A*
Probab=31.71 E-value=8.4 Score=38.66 Aligned_cols=17 Identities=35% Similarity=0.362 Sum_probs=13.6
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 428 CTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 428 ~~i~ayGqtgsGKT~Tm 444 (583)
-.++-||++|+|||+.+
T Consensus 52 ~~~ll~Gp~G~GKTTLa 68 (334)
T 1in4_A 52 DHVLLAGPPGLGKTTLA 68 (334)
T ss_dssp CCEEEESSTTSSHHHHH
T ss_pred CeEEEECCCCCcHHHHH
Confidence 34777999999999654
No 319
>2fwr_A DNA repair protein RAD25; DNA unwinding, XPB, DNA binding protein; HET: DNA; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.19 c.37.1.19 PDB: 2fzl_A*
Probab=31.58 E-value=18 Score=37.90 Aligned_cols=25 Identities=24% Similarity=0.201 Sum_probs=18.8
Q ss_pred hHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 39 LIDEVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 39 lv~~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
.++.+++|.+ ++..++||||||.+.
T Consensus 101 ai~~i~~~~~--~ll~~~TGsGKT~~~ 125 (472)
T 2fwr_A 101 ALERWLVDKR--GCIVLPTGSGKTHVA 125 (472)
T ss_dssp HHHHHTTTTE--EEEECCTTSCHHHHH
T ss_pred HHHHHHhcCC--EEEEeCCCCCHHHHH
Confidence 4556666754 567789999999875
No 320
>2gza_A Type IV secretion system protein VIRB11; ATPase, hydrolase; 2.60A {Brucella suis}
Probab=31.54 E-value=9.2 Score=38.99 Aligned_cols=20 Identities=35% Similarity=0.458 Sum_probs=14.8
Q ss_pred cccceeEEEeeccCCCceEEee
Q psy9448 45 SGYNCTVFAYGQTGTGKTFTME 66 (583)
Q Consensus 45 ~G~n~~i~ayGqtgSGKT~Tm~ 66 (583)
.|.+ +.-.|+||||||+++-
T Consensus 174 ~G~~--i~ivG~sGsGKSTll~ 193 (361)
T 2gza_A 174 LERV--IVVAGETGSGKTTLMK 193 (361)
T ss_dssp TTCC--EEEEESSSSCHHHHHH
T ss_pred cCCE--EEEECCCCCCHHHHHH
Confidence 4544 4456999999998873
No 321
>2pt7_A CAG-ALFA; ATPase, protein-protein complex, type IV secretion, hydrolas binding complex; 2.40A {Helicobacter pylori} SCOP: c.37.1.11 PDB: 1nly_A* 1nlz_A 1opx_A* 1g6o_A
Probab=31.43 E-value=9.2 Score=38.52 Aligned_cols=19 Identities=42% Similarity=0.599 Sum_probs=14.8
Q ss_pred cccceeEEEeeccCCCceEEe
Q psy9448 45 SGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 45 ~G~n~~i~ayGqtgSGKT~Tm 65 (583)
.|. .+.-.|++|||||.++
T Consensus 170 ~g~--~v~i~G~~GsGKTTll 188 (330)
T 2pt7_A 170 IGK--NVIVCGGTGSGKTTYI 188 (330)
T ss_dssp HTC--CEEEEESTTSCHHHHH
T ss_pred CCC--EEEEECCCCCCHHHHH
Confidence 454 4566799999999877
No 322
>1sxj_E Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=31.32 E-value=14 Score=36.99 Aligned_cols=15 Identities=40% Similarity=0.733 Sum_probs=13.5
Q ss_pred EEEeeccCCCceEEe
Q psy9448 430 VFAYGQTGTGKTFTM 444 (583)
Q Consensus 430 i~ayGqtgsGKT~Tm 444 (583)
++-||++|+|||+++
T Consensus 39 ~ll~Gp~G~GKTtl~ 53 (354)
T 1sxj_E 39 LLLYGPNGTGKKTRC 53 (354)
T ss_dssp EEEECSTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 888999999999775
No 323
>3fho_A ATP-dependent RNA helicase DBP5; mRNA export, ATPase, translation termination, binding, hydrolase, membrane, mRNA transport; 2.80A {Schizosaccharomyces pombe}
Probab=31.13 E-value=18 Score=38.42 Aligned_cols=26 Identities=31% Similarity=0.341 Sum_probs=19.6
Q ss_pred hHHHHhcccceeEEEeeccCCCceEE
Q psy9448 418 LIDEVLSGYNCTVFAYGQTGTGKTFT 443 (583)
Q Consensus 418 ~v~~~l~G~n~~i~ayGqtgsGKT~T 443 (583)
.+..+++|.+-.++..++||||||.+
T Consensus 149 ai~~i~~~~~~~~ll~apTGsGKT~~ 174 (508)
T 3fho_A 149 ALPLLLSNPPRNMIGQSQSGTGKTAA 174 (508)
T ss_dssp SHHHHHCSSCCCEEEECCSSTTSHHH
T ss_pred HHHHHHcCCCCCEEEECCCCccHHHH
Confidence 34555666445678999999999986
No 324
>2i4i_A ATP-dependent RNA helicase DDX3X; DEAD, structural genomics, SGC, structural GE consortium, hydrolase; HET: AMP; 2.20A {Homo sapiens}
Probab=31.00 E-value=19 Score=36.59 Aligned_cols=25 Identities=32% Similarity=0.417 Sum_probs=18.4
Q ss_pred hHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 418 LIDEVLSGYNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 418 ~v~~~l~G~n~~i~ayGqtgsGKT~Tm 444 (583)
.+..+++|.+ ++..++||||||.+.
T Consensus 45 ~i~~i~~~~~--~lv~a~TGsGKT~~~ 69 (417)
T 2i4i_A 45 AIPIIKEKRD--LMACAQTGSGKTAAF 69 (417)
T ss_dssp HHHHHHTTCC--EEEECCTTSCHHHHH
T ss_pred HHHHHccCCC--EEEEcCCCCHHHHHH
Confidence 3445667766 577899999999653
No 325
>1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} SCOP: c.37.1.1 PDB: 3h86_B* 1ki9_A
Probab=30.90 E-value=12 Score=33.36 Aligned_cols=17 Identities=29% Similarity=0.350 Sum_probs=13.8
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 49 CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm 65 (583)
..|+-.|..|||||+..
T Consensus 4 ~~I~i~G~~GsGKsT~~ 20 (192)
T 1kht_A 4 KVVVVTGVPGVGSTTSS 20 (192)
T ss_dssp CEEEEECCTTSCHHHHH
T ss_pred eEEEEECCCCCCHHHHH
Confidence 35788999999998654
No 326
>3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} SCOP: c.37.1.1 PDB: 2axp_A*
Probab=30.89 E-value=13 Score=32.44 Aligned_cols=16 Identities=13% Similarity=-0.010 Sum_probs=13.0
Q ss_pred eEEEeeccCCCceEEe
Q psy9448 50 TVFAYGQTGTGKTFTM 65 (583)
Q Consensus 50 ~i~ayGqtgSGKT~Tm 65 (583)
.|+..|..|||||+..
T Consensus 3 ~i~l~G~~GsGKsT~~ 18 (173)
T 3kb2_A 3 LIILEGPDCCFKSTVA 18 (173)
T ss_dssp EEEEECSSSSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4677899999998654
No 327
>3pxg_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 3.65A {Bacillus subtilis}
Probab=30.87 E-value=22 Score=37.44 Aligned_cols=43 Identities=23% Similarity=0.364 Sum_probs=28.4
Q ss_pred ccccccccccccceeehhhhhhhHHHHhcccceeEEEeeccCCCceEEeec
Q psy9448 396 GFDRVFSQESKQVDVYKYVVNPLIDEVLSGYNCTVFAYGQTGTGKTFTMEG 446 (583)
Q Consensus 396 ~fD~vf~~~~~q~~vy~~~~~~~v~~~l~G~n~~i~ayGqtgsGKT~Tm~G 446 (583)
.||.+.+.+. .+..+++.+..+....++-||++|+|||+...+
T Consensus 178 ~ld~iiGr~~--------~i~~l~~~l~r~~~~~~LL~G~pG~GKT~la~~ 220 (468)
T 3pxg_A 178 SLDPVIGRSK--------EIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEG 220 (468)
T ss_dssp CSCCCCCCHH--------HHHHHHHHHHCSSSCEEEEESCTTTTTHHHHHH
T ss_pred CCCCccCcHH--------HHHHHHHHHhccCCCCeEEECCCCCCHHHHHHH
Confidence 4666665532 234455444455566788999999999987755
No 328
>2db3_A ATP-dependent RNA helicase VASA; DEAD-BOX, protein-RNA complex, ATPase, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.20A {Drosophila melanogaster}
Probab=30.72 E-value=19 Score=37.31 Aligned_cols=24 Identities=42% Similarity=0.545 Sum_probs=18.4
Q ss_pred hHHHHhcccceeEEEeeccCCCceEE
Q psy9448 418 LIDEVLSGYNCTVFAYGQTGTGKTFT 443 (583)
Q Consensus 418 ~v~~~l~G~n~~i~ayGqtgsGKT~T 443 (583)
.+..+++|.+ +++.++||||||..
T Consensus 86 ai~~i~~g~d--~i~~a~TGsGKT~a 109 (434)
T 2db3_A 86 SIPVISSGRD--LMACAQTGSGKTAA 109 (434)
T ss_dssp HHHHHHTTCC--EEEECCTTSSHHHH
T ss_pred HHHHHhcCCC--EEEECCCCCCchHH
Confidence 4455677765 68889999999975
No 329
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14
Probab=30.68 E-value=8 Score=35.68 Aligned_cols=18 Identities=17% Similarity=0.113 Sum_probs=15.4
Q ss_pred eEEEeeccCCCceEEeec
Q psy9448 50 TVFAYGQTGTGKTFTMEG 67 (583)
Q Consensus 50 ~i~ayGqtgSGKT~Tm~G 67 (583)
..+-||+.|||||..+.+
T Consensus 10 i~v~~G~mgsGKTT~ll~ 27 (191)
T 1xx6_A 10 VEVIVGPMYSGKSEELIR 27 (191)
T ss_dssp EEEEECSTTSSHHHHHHH
T ss_pred EEEEECCCCCcHHHHHHH
Confidence 578899999999988865
No 330
>1sxj_A Activator 1 95 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=30.66 E-value=11 Score=40.50 Aligned_cols=18 Identities=33% Similarity=0.484 Sum_probs=15.6
Q ss_pred ceeEEEeeccCCCceEEe
Q psy9448 48 NCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 48 n~~i~ayGqtgSGKT~Tm 65 (583)
...++-||++|+|||++.
T Consensus 77 ~~~lLL~GppGtGKTtla 94 (516)
T 1sxj_A 77 FRAAMLYGPPGIGKTTAA 94 (516)
T ss_dssp CSEEEEECSTTSSHHHHH
T ss_pred CcEEEEECCCCCCHHHHH
Confidence 357889999999999876
No 331
>1ojl_A Transcriptional regulatory protein ZRAR; response regulator, two component system, AAA domain, NTRC family, DNA-binding; HET: ATP; 3.0A {Salmonella typhimurium}
Probab=30.55 E-value=13 Score=36.69 Aligned_cols=20 Identities=35% Similarity=0.554 Sum_probs=16.7
Q ss_pred ccceeEEEeeccCCCceEEe
Q psy9448 425 GYNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 425 G~n~~i~ayGqtgsGKT~Tm 444 (583)
.....|+-||++|+|||+..
T Consensus 23 ~~~~~vLi~Ge~GtGKt~lA 42 (304)
T 1ojl_A 23 PSDATVLIHGDSGTGKELVA 42 (304)
T ss_dssp STTSCEEEESCTTSCHHHHH
T ss_pred CCCCcEEEECCCCchHHHHH
Confidence 45678999999999999754
No 332
>2r44_A Uncharacterized protein; putative ATPase, structural genomics, joint center for struc genomics, JCSG; HET: MSE PG4; 2.00A {Cytophaga hutchinsonii atcc 33406}
Probab=30.46 E-value=12 Score=37.19 Aligned_cols=17 Identities=24% Similarity=0.407 Sum_probs=14.1
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 428 CTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 428 ~~i~ayGqtgsGKT~Tm 444 (583)
..++-||++|+|||+.+
T Consensus 47 ~~vll~G~pGtGKT~la 63 (331)
T 2r44_A 47 GHILLEGVPGLAKTLSV 63 (331)
T ss_dssp CCEEEESCCCHHHHHHH
T ss_pred CeEEEECCCCCcHHHHH
Confidence 36888999999999654
No 333
>2xzl_A ATP-dependent helicase NAM7; hydrolase-RNA complex, NMD, RNA degradation, allosteric REGU; HET: ADP 1PE; 2.40A {Saccharomyces cerevisiae}
Probab=30.43 E-value=13 Score=42.35 Aligned_cols=26 Identities=35% Similarity=0.436 Sum_probs=18.7
Q ss_pred hHHHHhcccceeEEEeeccCCCceEEee
Q psy9448 39 LIDEVLSGYNCTVFAYGQTGTGKTFTME 66 (583)
Q Consensus 39 lv~~~l~G~n~~i~ayGqtgSGKT~Tm~ 66 (583)
.|..++. +..++..|+.|||||+|+.
T Consensus 368 Av~~~l~--~~~~lI~GppGTGKT~~i~ 393 (802)
T 2xzl_A 368 AVSHVLQ--RPLSLIQGPPGTGKTVTSA 393 (802)
T ss_dssp HHHHHTT--CSEEEEECSTTSSHHHHHH
T ss_pred HHHHHhc--CCCEEEECCCCCCHHHHHH
Confidence 3555554 3346789999999999974
No 334
>2px0_A Flagellar biosynthesis protein FLHF; SRP GTPase, flagellum, protein transport, biosynthetic protein; HET: GNP; 3.00A {Bacillus subtilis} PDB: 2px3_A* 3syn_A*
Probab=30.03 E-value=11 Score=37.43 Aligned_cols=18 Identities=39% Similarity=0.636 Sum_probs=14.9
Q ss_pred eeEEEeeccCCCceEEee
Q psy9448 49 CTVFAYGQTGTGKTFTME 66 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm~ 66 (583)
..|...|++|+|||+++.
T Consensus 106 ~vi~lvG~~GsGKTTl~~ 123 (296)
T 2px0_A 106 KYIVLFGSTGAGKTTTLA 123 (296)
T ss_dssp SEEEEEESTTSSHHHHHH
T ss_pred cEEEEECCCCCCHHHHHH
Confidence 456678999999999884
No 335
>1z6g_A Guanylate kinase; structural genomics, SGC, structural genom consortium, transferase; HET: EPE; 2.18A {Plasmodium falciparum}
Probab=29.77 E-value=9.6 Score=35.65 Aligned_cols=16 Identities=25% Similarity=0.478 Sum_probs=12.8
Q ss_pred eEEEeeccCCCceEEe
Q psy9448 50 TVFAYGQTGTGKTFTM 65 (583)
Q Consensus 50 ~i~ayGqtgSGKT~Tm 65 (583)
.+.-.|++|||||..+
T Consensus 25 ~~~lvGpsGsGKSTLl 40 (218)
T 1z6g_A 25 PLVICGPSGVGKGTLI 40 (218)
T ss_dssp CEEEECSTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 3456799999999776
No 336
>2rhm_A Putative kinase; P-loop containing nucleoside triphosphate hydrolases fold, S genomics, joint center for structural genomics, JCSG; HET: MSE; 1.70A {Chloroflexus aurantiacus}
Probab=29.69 E-value=14 Score=33.16 Aligned_cols=17 Identities=29% Similarity=0.389 Sum_probs=14.1
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 49 CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm 65 (583)
..|+..|..|||||+..
T Consensus 6 ~~I~l~G~~GsGKST~~ 22 (193)
T 2rhm_A 6 ALIIVTGHPATGKTTLS 22 (193)
T ss_dssp EEEEEEESTTSSHHHHH
T ss_pred eEEEEECCCCCCHHHHH
Confidence 46788999999998754
No 337
>2wjy_A Regulator of nonsense transcripts 1; nonsense mediated decay, zinc-finger, ATP-binding, metal-BIN UPF2, UPF1, helicase, hydrolase; 2.50A {Homo sapiens} PDB: 2wjv_A 2iyk_A
Probab=29.60 E-value=14 Score=42.00 Aligned_cols=27 Identities=33% Similarity=0.384 Sum_probs=19.4
Q ss_pred hHHHHhcccceeEEEeeccCCCceEEeec
Q psy9448 39 LIDEVLSGYNCTVFAYGQTGTGKTFTMEG 67 (583)
Q Consensus 39 lv~~~l~G~n~~i~ayGqtgSGKT~Tm~G 67 (583)
.|..++.+ ..++..|+.|||||+|+..
T Consensus 364 Av~~~l~~--~~~lI~GppGTGKT~ti~~ 390 (800)
T 2wjy_A 364 AVKTVLQR--PLSLIQGPPGTGKTVTSAT 390 (800)
T ss_dssp HHHHHHTS--SEEEEECCTTSCHHHHHHH
T ss_pred HHHHhccC--CeEEEEcCCCCCHHHHHHH
Confidence 45555543 3567899999999999753
No 338
>1sxj_B Activator 1 37 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=29.56 E-value=19 Score=35.04 Aligned_cols=22 Identities=27% Similarity=0.347 Sum_probs=16.3
Q ss_pred hcccceeEEEeeccCCCceEEe
Q psy9448 423 LSGYNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 423 l~G~n~~i~ayGqtgsGKT~Tm 444 (583)
-.|....++-||+.|+|||+..
T Consensus 38 ~~~~~~~~ll~G~~G~GKt~la 59 (323)
T 1sxj_B 38 KDGNMPHMIISGMPGIGKTTSV 59 (323)
T ss_dssp HSCCCCCEEEECSTTSSHHHHH
T ss_pred HcCCCCeEEEECcCCCCHHHHH
Confidence 3444334899999999999764
No 339
>3e1s_A Exodeoxyribonuclease V, subunit RECD; alpha and beta protein, ATP-binding, nucleotide-binding, HYD; 2.20A {Deinococcus radiodurans} PDB: 3gp8_A 3gpl_A*
Probab=29.55 E-value=14 Score=40.33 Aligned_cols=26 Identities=31% Similarity=0.477 Sum_probs=19.0
Q ss_pred hHHHHhcccceeEEEeeccCCCceEEee
Q psy9448 39 LIDEVLSGYNCTVFAYGQTGTGKTFTME 66 (583)
Q Consensus 39 lv~~~l~G~n~~i~ayGqtgSGKT~Tm~ 66 (583)
.+..++. +..++..|+.|||||+++.
T Consensus 197 Av~~~~~--~~~~~I~G~pGTGKTt~i~ 222 (574)
T 3e1s_A 197 VLDQLAG--HRLVVLTGGPGTGKSTTTK 222 (574)
T ss_dssp HHHHHTT--CSEEEEECCTTSCHHHHHH
T ss_pred HHHHHHh--CCEEEEEcCCCCCHHHHHH
Confidence 4555554 3566778999999999874
No 340
>1r6b_X CLPA protein; AAA+, N-terminal domain, CLPS, crystal, binding mechanism, hydrolase; HET: ADP; 2.25A {Escherichia coli} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 PDB: 1ksf_X*
Probab=29.52 E-value=18 Score=40.60 Aligned_cols=32 Identities=25% Similarity=0.351 Sum_probs=22.4
Q ss_pred hhhhHHHHhcccceeEEEeeccCCCceEEeec
Q psy9448 36 VNPLIDEVLSGYNCTVFAYGQTGTGKTFTMEG 67 (583)
Q Consensus 36 ~~plv~~~l~G~n~~i~ayGqtgSGKT~Tm~G 67 (583)
++.+++.+.......++-||++|+|||+.+.+
T Consensus 195 i~~l~~~l~~~~~~~vlL~G~~GtGKT~la~~ 226 (758)
T 1r6b_X 195 LERAIQVLCRRRKNNPLLVGESGVGKTAIAEG 226 (758)
T ss_dssp HHHHHHHHTSSSSCEEEEECCTTSSHHHHHHH
T ss_pred HHHHHHHHhccCCCCeEEEcCCCCCHHHHHHH
Confidence 33444444445556688999999999988754
No 341
>2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis; HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB: 2ze5_A* 2ze7_A* 2ze8_A
Probab=29.38 E-value=17 Score=34.90 Aligned_cols=15 Identities=40% Similarity=0.474 Sum_probs=12.5
Q ss_pred eEEEeeccCCCceEE
Q psy9448 50 TVFAYGQTGTGKTFT 64 (583)
Q Consensus 50 ~i~ayGqtgSGKT~T 64 (583)
.|+..|++|||||..
T Consensus 3 li~I~G~~GSGKSTl 17 (253)
T 2ze6_A 3 LHLIYGPTCSGKTDM 17 (253)
T ss_dssp EEEEECCTTSSHHHH
T ss_pred EEEEECCCCcCHHHH
Confidence 467899999999864
No 342
>2dhr_A FTSH; AAA+ protein, hexameric Zn metalloprotease, hydrolase; HET: ADP; 3.90A {Thermus thermophilus}
Probab=29.29 E-value=10 Score=40.57 Aligned_cols=16 Identities=38% Similarity=0.528 Sum_probs=14.4
Q ss_pred eEEEeeccCCCceEEe
Q psy9448 50 TVFAYGQTGTGKTFTM 65 (583)
Q Consensus 50 ~i~ayGqtgSGKT~Tm 65 (583)
.|+-||++|+|||+.+
T Consensus 66 GvLL~GppGtGKTtLa 81 (499)
T 2dhr_A 66 GVLLVGPPGVGKTHLA 81 (499)
T ss_dssp EEEEECSSSSSHHHHH
T ss_pred eEEEECCCCCCHHHHH
Confidence 4899999999999876
No 343
>2i3b_A HCR-ntpase, human cancer-related ntpase; AAA, rossmann, hydrolase; NMR {Homo sapiens} SCOP: c.37.1.11
Probab=29.09 E-value=9.9 Score=34.92 Aligned_cols=16 Identities=44% Similarity=0.654 Sum_probs=13.5
Q ss_pred eEEEeeccCCCceEEe
Q psy9448 50 TVFAYGQTGTGKTFTM 65 (583)
Q Consensus 50 ~i~ayGqtgSGKT~Tm 65 (583)
.+.-.|++|+|||.++
T Consensus 3 ~i~i~G~nG~GKTTll 18 (189)
T 2i3b_A 3 HVFLTGPPGVGKTTLI 18 (189)
T ss_dssp CEEEESCCSSCHHHHH
T ss_pred EEEEECCCCChHHHHH
Confidence 4567899999999887
No 344
>4gp7_A Metallophosphoesterase; polynucleotide kinase phosphatase, RNA repair, transferase; HET: ATP CIT; 2.00A {Clostridium thermocellum} PDB: 4gp6_A*
Probab=28.98 E-value=11 Score=33.76 Aligned_cols=17 Identities=29% Similarity=0.473 Sum_probs=13.3
Q ss_pred eEEEeeccCCCceEEee
Q psy9448 429 TVFAYGQTGTGKTFTME 445 (583)
Q Consensus 429 ~i~ayGqtgsGKT~Tm~ 445 (583)
.+.-.|++|||||..+-
T Consensus 11 i~~l~G~nGsGKSTl~~ 27 (171)
T 4gp7_A 11 LVVLIGSSGSGKSTFAK 27 (171)
T ss_dssp EEEEECCTTSCHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 45567999999996664
No 345
>1qvr_A CLPB protein; coiled coil, AAA ATPase, chaperone; HET: ANP; 3.00A {Thermus thermophilus} SCOP: a.174.1.1 c.37.1.20 c.37.1.20
Probab=28.92 E-value=11 Score=43.13 Aligned_cols=33 Identities=27% Similarity=0.399 Sum_probs=23.7
Q ss_pred hhhhhHHHHhcccceeEEEeeccCCCceEEeec
Q psy9448 35 VVNPLIDEVLSGYNCTVFAYGQTGTGKTFTMEG 67 (583)
Q Consensus 35 ~~~plv~~~l~G~n~~i~ayGqtgSGKT~Tm~G 67 (583)
.++.+++.+..+....++-||++|+|||+.+.+
T Consensus 178 ~i~~l~~~l~~~~~~~vlL~G~pG~GKT~la~~ 210 (854)
T 1qvr_A 178 EIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEG 210 (854)
T ss_dssp HHHHHHHHHHCSSCCCCEEEECTTSCHHHHHHH
T ss_pred HHHHHHHHHhcCCCCceEEEcCCCCCHHHHHHH
Confidence 344555555556555678899999999998754
No 346
>1w5s_A Origin recognition complex subunit 2 ORC2; replication, CDC6, DNA replication initiation, DNA BIND protein, AAA+ ATPase; HET: ADP; 2.4A {Aeropyrum pernix} SCOP: a.4.5.11 c.37.1.20 PDB: 1w5t_A*
Probab=28.85 E-value=27 Score=35.44 Aligned_cols=25 Identities=32% Similarity=0.533 Sum_probs=18.3
Q ss_pred HHHhcc---cceeEEE--eeccCCCceEEe
Q psy9448 420 DEVLSG---YNCTVFA--YGQTGTGKTFTM 444 (583)
Q Consensus 420 ~~~l~G---~n~~i~a--yGqtgsGKT~Tm 444 (583)
..+..| ....++- ||+.|+|||..+
T Consensus 40 ~~~~~~~~~~~~~~li~i~G~~G~GKT~L~ 69 (412)
T 1w5s_A 40 NRLLSGAGLSDVNMIYGSIGRVGIGKTTLA 69 (412)
T ss_dssp HHHHTSSCBCCEEEEEECTTCCSSSHHHHH
T ss_pred HHHhcCCCCCCCEEEEeCcCcCCCCHHHHH
Confidence 444455 4567888 999999999554
No 347
>3uie_A Adenylyl-sulfate kinase 1, chloroplastic; rossmann fold, transferase-transferase complex; HET: ADX ANP; 1.79A {Arabidopsis thaliana} SCOP: c.37.1.0 PDB: 4fxp_A*
Probab=28.80 E-value=20 Score=32.64 Aligned_cols=19 Identities=26% Similarity=0.639 Sum_probs=14.8
Q ss_pred cceeEEEeeccCCCceEEe
Q psy9448 47 YNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 47 ~n~~i~ayGqtgSGKT~Tm 65 (583)
-...|...|++|||||+.+
T Consensus 24 ~g~~i~l~G~sGsGKSTl~ 42 (200)
T 3uie_A 24 KGCVIWVTGLSGSGKSTLA 42 (200)
T ss_dssp CCEEEEEECSTTSSHHHHH
T ss_pred CCeEEEEECCCCCCHHHHH
Confidence 3456778899999998654
No 348
>3cf2_A TER ATPase, transitional endoplasmic reticulum ATPase, valosi; AAA, CDC48, ERAD, transport protein; HET: ADP ANP; 3.50A {Mus musculus} PDB: 3cf1_A* 3cf3_A* 1r7r_A*
Probab=28.76 E-value=11 Score=42.82 Aligned_cols=17 Identities=41% Similarity=0.726 Sum_probs=14.3
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 49 CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm 65 (583)
..|+-||+.|+|||...
T Consensus 239 ~GILL~GPPGTGKT~LA 255 (806)
T 3cf2_A 239 RGILLYGPPGTGKTLIA 255 (806)
T ss_dssp CEEEEECCTTSCHHHHH
T ss_pred CeEEEECCCCCCHHHHH
Confidence 46999999999998544
No 349
>1gm5_A RECG; helicase, replication restart; HET: DNA ADP; 3.24A {Thermotoga maritima} SCOP: a.24.21.1 b.40.4.9 c.37.1.19 c.37.1.19
Probab=28.71 E-value=18 Score=40.89 Aligned_cols=26 Identities=23% Similarity=0.377 Sum_probs=18.4
Q ss_pred HHHHhcccceeEEEeeccCCCceEEe
Q psy9448 40 IDEVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 40 v~~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
....-.+....++..|+||||||...
T Consensus 381 ~~~l~~~~~~~~Ll~a~TGSGKTlva 406 (780)
T 1gm5_A 381 RNDMISEKPMNRLLQGDVGSGKTVVA 406 (780)
T ss_dssp HHHHHSSSCCCCEEECCSSSSHHHHH
T ss_pred HhhccccCCCcEEEEcCCCCCHHHHH
Confidence 33444455556788999999999764
No 350
>3vaa_A Shikimate kinase, SK; structural genomics, center for structural genomics of infec diseases, csgid, metal binding, transferase; 1.70A {Bacteroides thetaiotaomicron}
Probab=28.44 E-value=18 Score=32.98 Aligned_cols=16 Identities=38% Similarity=0.492 Sum_probs=13.5
Q ss_pred eEEEeeccCCCceEEe
Q psy9448 50 TVFAYGQTGTGKTFTM 65 (583)
Q Consensus 50 ~i~ayGqtgSGKT~Tm 65 (583)
.|+..|.+|||||+..
T Consensus 27 ~i~l~G~~GsGKsTl~ 42 (199)
T 3vaa_A 27 RIFLTGYMGAGKTTLG 42 (199)
T ss_dssp EEEEECCTTSCHHHHH
T ss_pred EEEEEcCCCCCHHHHH
Confidence 5788899999998764
No 351
>2v1x_A ATP-dependent DNA helicase Q1; DNA strand annealing, mismatch repair, nucleotide-binding, DNA-binding, polymorphism, nuclear protein, ATPase; HET: ADP; 2.00A {Homo sapiens} PDB: 2wwy_A*
Probab=28.28 E-value=24 Score=38.52 Aligned_cols=26 Identities=31% Similarity=0.437 Sum_probs=20.1
Q ss_pred hhhHHHHhcccceeEEEeeccCCCceEE
Q psy9448 416 NPLIDEVLSGYNCTVFAYGQTGTGKTFT 443 (583)
Q Consensus 416 ~~~v~~~l~G~n~~i~ayGqtgsGKT~T 443 (583)
...+..+++|.+ +++.++||+|||.+
T Consensus 50 ~~~i~~il~g~d--~lv~~pTGsGKTl~ 75 (591)
T 2v1x_A 50 LETINVTMAGKE--VFLVMPTGGGKSLC 75 (591)
T ss_dssp HHHHHHHHTTCC--EEEECCTTSCTTHH
T ss_pred HHHHHHHHcCCC--EEEEECCCChHHHH
Confidence 345666778877 68889999999964
No 352
>4a4z_A Antiviral helicase SKI2; hydrolase, ATPase, mRNA degradation, exosome; HET: ANP; 2.40A {Saccharomyces cerevisiae} PDB: 4a4k_A
Probab=28.18 E-value=23 Score=41.35 Aligned_cols=25 Identities=28% Similarity=0.385 Sum_probs=19.3
Q ss_pred hhHHHHhcccceeEEEeeccCCCceEE
Q psy9448 38 PLIDEVLSGYNCTVFAYGQTGTGKTFT 64 (583)
Q Consensus 38 plv~~~l~G~n~~i~ayGqtgSGKT~T 64 (583)
.+|..+++|.+ ++..++||||||.+
T Consensus 46 ~aI~~il~g~~--vlv~apTGsGKTlv 70 (997)
T 4a4z_A 46 EAVYHLEQGDS--VFVAAHTSAGKTVV 70 (997)
T ss_dssp HHHHHHHTTCE--EEEECCTTSCSHHH
T ss_pred HHHHHHHcCCC--EEEEECCCCcHHHH
Confidence 45667778865 67889999999953
No 353
>3e70_C DPA, signal recognition particle receptor; FTSY, SRP-GTPase, protein-targeting, transport protein; HET: GDP; 1.97A {Pyrococcus furiosus} PDB: 3dmd_B 3dm9_B*
Probab=28.17 E-value=12 Score=37.79 Aligned_cols=18 Identities=33% Similarity=0.512 Sum_probs=15.3
Q ss_pred ceeEEEeeccCCCceEEe
Q psy9448 48 NCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 48 n~~i~ayGqtgSGKT~Tm 65 (583)
...|.-.|++|||||.++
T Consensus 129 g~vi~lvG~nGaGKTTll 146 (328)
T 3e70_C 129 PYVIMFVGFNGSGKTTTI 146 (328)
T ss_dssp SEEEEEECCTTSSHHHHH
T ss_pred CeEEEEECCCCCCHHHHH
Confidence 456778899999999887
No 354
>3hws_A ATP-dependent CLP protease ATP-binding subunit CL; CLPXP, AAA+ molecular machine, hexamer, asymmetric,, ATP-BIN chaperone, metal-binding; HET: ADP; 3.25A {Escherichia coli} PDB: 3hte_A
Probab=28.12 E-value=15 Score=37.23 Aligned_cols=18 Identities=33% Similarity=0.628 Sum_probs=14.8
Q ss_pred ceeEEEeeccCCCceEEe
Q psy9448 427 NCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 427 n~~i~ayGqtgsGKT~Tm 444 (583)
...++-||++|+|||+..
T Consensus 51 ~~~vll~GppGtGKT~la 68 (363)
T 3hws_A 51 KSNILLIGPTGSGKTLLA 68 (363)
T ss_dssp CCCEEEECCTTSSHHHHH
T ss_pred CCeEEEECCCCCCHHHHH
Confidence 356888999999999654
No 355
>2og2_A Putative signal recognition particle receptor; nucleotide-binding, protein transport; 2.00A {Arabidopsis thaliana}
Probab=28.10 E-value=12 Score=38.34 Aligned_cols=17 Identities=29% Similarity=0.565 Sum_probs=14.9
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 49 CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm 65 (583)
..|.-.|++|||||+++
T Consensus 158 ~vi~lvG~nGsGKTTll 174 (359)
T 2og2_A 158 AVIMIVGVNGGGKTTSL 174 (359)
T ss_dssp EEEEEECCTTSCHHHHH
T ss_pred eEEEEEcCCCChHHHHH
Confidence 46778899999999988
No 356
>3upu_A ATP-dependent DNA helicase DDA; RECA-like domain, SH3 domain, PIN-tower interface, coupling hydrolysis to DNA unwinding, ssDNA; 3.30A {Enterobacteria phage T4}
Probab=28.02 E-value=17 Score=38.21 Aligned_cols=36 Identities=22% Similarity=0.279 Sum_probs=22.9
Q ss_pred ccccceeehhhhhhhHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 404 ESKQVDVYKYVVNPLIDEVLSGYNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 404 ~~~q~~vy~~~~~~~v~~~l~G~n~~i~ayGqtgsGKT~Tm 444 (583)
+..|.+.+..+ +..+.++- ..++..|..|||||+++
T Consensus 27 n~~Q~~av~~~----~~~i~~~~-~~~li~G~aGTGKT~ll 62 (459)
T 3upu_A 27 TEGQKNAFNIV----MKAIKEKK-HHVTINGPAGTGATTLT 62 (459)
T ss_dssp CHHHHHHHHHH----HHHHHSSS-CEEEEECCTTSCHHHHH
T ss_pred CHHHHHHHHHH----HHHHhcCC-CEEEEEeCCCCCHHHHH
Confidence 44666554443 22333333 37889999999999765
No 357
>2j41_A Guanylate kinase; GMP, GMK, transferase, ATP-binding, nucleotide- binding; HET: 5GP; 1.9A {Staphylococcus aureus}
Probab=28.00 E-value=16 Score=33.19 Aligned_cols=16 Identities=25% Similarity=0.378 Sum_probs=13.3
Q ss_pred eEEEeeccCCCceEEe
Q psy9448 50 TVFAYGQTGTGKTFTM 65 (583)
Q Consensus 50 ~i~ayGqtgSGKT~Tm 65 (583)
.|.-.|++|||||+.+
T Consensus 8 ~i~l~G~~GsGKSTl~ 23 (207)
T 2j41_A 8 LIVLSGPSGVGKGTVR 23 (207)
T ss_dssp EEEEECSTTSCHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 5667899999999765
No 358
>3sqw_A ATP-dependent RNA helicase MSS116, mitochondrial; RECA fold, RNA dependent ATPase, RNA helicase; HET: ANP; 1.91A {Saccharomyces cerevisiae S288C}
Probab=27.86 E-value=25 Score=37.97 Aligned_cols=27 Identities=44% Similarity=0.599 Sum_probs=20.2
Q ss_pred hhHHHHhcccceeEEEeeccCCCceEE
Q psy9448 417 PLIDEVLSGYNCTVFAYGQTGTGKTFT 443 (583)
Q Consensus 417 ~~v~~~l~G~n~~i~ayGqtgsGKT~T 443 (583)
..+..++.|-+-.+++.++||||||.+
T Consensus 50 ~~i~~il~~~~~dvlv~apTGsGKTl~ 76 (579)
T 3sqw_A 50 KTIKPILSSEDHDVIARAKTGTGKTFA 76 (579)
T ss_dssp HHHHHHHCSSSEEEEEECCTTSCHHHH
T ss_pred HHHHHHHccCCCeEEEEcCCCcHHHHH
Confidence 355566755555688999999999975
No 359
>1w36_D RECD, exodeoxyribonuclease V alpha chain; recombination, helicase, hydrolase, DNA repair; HET: DNA; 3.1A {Escherichia coli} SCOP: c.37.1.19 c.37.1.19 PDB: 3k70_D*
Probab=27.70 E-value=12 Score=41.09 Aligned_cols=19 Identities=37% Similarity=0.403 Sum_probs=15.5
Q ss_pred ceeEEEeeccCCCceEEee
Q psy9448 427 NCTVFAYGQTGTGKTFTME 445 (583)
Q Consensus 427 n~~i~ayGqtgsGKT~Tm~ 445 (583)
+..++..|++|||||+|+.
T Consensus 164 ~~~~vi~G~pGTGKTt~l~ 182 (608)
T 1w36_D 164 RRISVISGGPGTGKTTTVA 182 (608)
T ss_dssp BSEEEEECCTTSTHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHH
Confidence 3567889999999998763
No 360
>1oyw_A RECQ helicase, ATP-dependent DNA helicase; winged helix, helix-turn-helix, ATP binding, Zn(2+) binding, hydrolase; 1.80A {Escherichia coli} SCOP: a.4.5.43 c.37.1.19 c.37.1.19 PDB: 1oyy_A*
Probab=27.46 E-value=16 Score=39.24 Aligned_cols=27 Identities=41% Similarity=0.714 Sum_probs=20.5
Q ss_pred hhhHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 37 NPLIDEVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 37 ~plv~~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
..+++.+++|.++ +..++||||||.+.
T Consensus 31 ~~~i~~il~g~d~--lv~apTGsGKTl~~ 57 (523)
T 1oyw_A 31 EEIIDTVLSGRDC--LVVMPTGGGKSLCY 57 (523)
T ss_dssp HHHHHHHHTTCCE--EEECSCHHHHHHHH
T ss_pred HHHHHHHHcCCCE--EEECCCCcHHHHHH
Confidence 4567788889875 55679999999743
No 361
>1y63_A LMAJ004144AAA protein; structural genomics, protein structure initiative, PSI, SGPP structural genomics of pathogenic protozoa consortium; HET: ADP; 1.70A {Leishmania major} SCOP: c.37.1.1
Probab=27.27 E-value=16 Score=32.95 Aligned_cols=16 Identities=38% Similarity=0.561 Sum_probs=13.4
Q ss_pred eEEEeeccCCCceEEe
Q psy9448 50 TVFAYGQTGTGKTFTM 65 (583)
Q Consensus 50 ~i~ayGqtgSGKT~Tm 65 (583)
.|+-.|..|||||+..
T Consensus 12 ~I~l~G~~GsGKSTv~ 27 (184)
T 1y63_A 12 NILITGTPGTGKTSMA 27 (184)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4788999999998754
No 362
>3cm0_A Adenylate kinase; ATP-binding, cytoplasm, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics; 1.80A {Thermus thermophilus}
Probab=27.22 E-value=17 Score=32.47 Aligned_cols=16 Identities=31% Similarity=0.463 Sum_probs=13.4
Q ss_pred eEEEeeccCCCceEEe
Q psy9448 50 TVFAYGQTGTGKTFTM 65 (583)
Q Consensus 50 ~i~ayGqtgSGKT~Tm 65 (583)
.|+-.|..|||||+..
T Consensus 6 ~I~l~G~~GsGKST~~ 21 (186)
T 3cm0_A 6 AVIFLGPPGAGKGTQA 21 (186)
T ss_dssp EEEEECCTTSCHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 5788899999998754
No 363
>1um8_A ATP-dependent CLP protease ATP-binding subunit CL; CLPP binding loop, chaperone; HET: ADP; 2.60A {Helicobacter pylori} SCOP: c.37.1.20
Probab=27.20 E-value=15 Score=37.30 Aligned_cols=18 Identities=33% Similarity=0.641 Sum_probs=15.0
Q ss_pred ceeEEEeeccCCCceEEe
Q psy9448 427 NCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 427 n~~i~ayGqtgsGKT~Tm 444 (583)
...++-||++|+|||+..
T Consensus 72 ~~~ill~Gp~GtGKT~la 89 (376)
T 1um8_A 72 KSNILLIGPTGSGKTLMA 89 (376)
T ss_dssp CCCEEEECCTTSSHHHHH
T ss_pred CCCEEEECCCCCCHHHHH
Confidence 456899999999999764
No 364
>1xti_A Probable ATP-dependent RNA helicase P47; alpha-beta fold, gene regulation; 1.95A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 1xtj_A* 1xtk_A
Probab=27.19 E-value=24 Score=35.36 Aligned_cols=25 Identities=28% Similarity=0.510 Sum_probs=18.6
Q ss_pred hHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 418 LIDEVLSGYNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 418 ~v~~~l~G~n~~i~ayGqtgsGKT~Tm 444 (583)
.+..+++|.+ ++..++||+|||.+.
T Consensus 38 ~i~~~~~~~~--~lv~a~TGsGKT~~~ 62 (391)
T 1xti_A 38 CIPQAILGMD--VLCQAKSGMGKTAVF 62 (391)
T ss_dssp HHHHHTTTCC--EEEECSSCSSHHHHH
T ss_pred HHHHHhcCCc--EEEECCCCCcHHHHH
Confidence 4555667765 677889999999754
No 365
>2cvh_A DNA repair and recombination protein RADB; filament formation, homologous recombination, ATPase domain, hyperthermophIle; HET: DNA; 2.20A {Thermococcus kodakarensis} PDB: 2cvf_A*
Probab=26.94 E-value=27 Score=31.81 Aligned_cols=29 Identities=28% Similarity=0.480 Sum_probs=20.9
Q ss_pred hhhHHHHhc-ccc--eeEEEeeccCCCceEEe
Q psy9448 416 NPLIDEVLS-GYN--CTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 416 ~~~v~~~l~-G~n--~~i~ayGqtgsGKT~Tm 444 (583)
-+-++.++. |.. ..+.-+|++|+|||..+
T Consensus 6 ~~~LD~~l~Ggi~~G~~~~i~G~~GsGKTtl~ 37 (220)
T 2cvh_A 6 TKSLDSLLGGGFAPGVLTQVYGPYASGKTTLA 37 (220)
T ss_dssp CHHHHHHTTSSBCTTSEEEEECSTTSSHHHHH
T ss_pred cHHHHHhhcCCCcCCEEEEEECCCCCCHHHHH
Confidence 345666775 554 46788999999999554
No 366
>1tev_A UMP-CMP kinase; ploop, NMP binding region, LID region, conformational changes, transferase; 2.10A {Homo sapiens} SCOP: c.37.1.1
Probab=26.90 E-value=16 Score=32.64 Aligned_cols=16 Identities=38% Similarity=0.605 Sum_probs=13.3
Q ss_pred eEEEeeccCCCceEEe
Q psy9448 50 TVFAYGQTGTGKTFTM 65 (583)
Q Consensus 50 ~i~ayGqtgSGKT~Tm 65 (583)
.|+-.|..|||||+..
T Consensus 5 ~I~l~G~~GsGKsT~a 20 (196)
T 1tev_A 5 VVFVLGGPGAGKGTQC 20 (196)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 5788899999998753
No 367
>1odf_A YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser2 intergenic region; yeast protein, ATP binding protein; 2.25A {Saccharomyces cerevisiae} SCOP: c.37.1.6
Probab=26.89 E-value=23 Score=34.78 Aligned_cols=20 Identities=35% Similarity=0.561 Sum_probs=15.3
Q ss_pred ccceeEEEeeccCCCceEEe
Q psy9448 46 GYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 46 G~n~~i~ayGqtgSGKT~Tm 65 (583)
+-...|.-.|++|||||+..
T Consensus 29 ~~~~ii~I~G~sGsGKSTla 48 (290)
T 1odf_A 29 KCPLFIFFSGPQGSGKSFTS 48 (290)
T ss_dssp CSCEEEEEECCTTSSHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHH
Confidence 33456777899999999765
No 368
>1nks_A Adenylate kinase; thermophilic, transferase; HET: AMP ADP; 2.57A {Sulfolobus acidocaldarius} SCOP: c.37.1.1
Probab=26.86 E-value=16 Score=32.49 Aligned_cols=16 Identities=25% Similarity=0.389 Sum_probs=13.0
Q ss_pred eEEEeeccCCCceEEe
Q psy9448 50 TVFAYGQTGTGKTFTM 65 (583)
Q Consensus 50 ~i~ayGqtgSGKT~Tm 65 (583)
.|+-.|..|||||+..
T Consensus 3 ~I~i~G~~GsGKsT~~ 18 (194)
T 1nks_A 3 IGIVTGIPGVGKSTVL 18 (194)
T ss_dssp EEEEEECTTSCHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4778899999998644
No 369
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=26.83 E-value=11 Score=35.80 Aligned_cols=20 Identities=35% Similarity=0.489 Sum_probs=17.0
Q ss_pred eeEEEeeccCCCceEEeecc
Q psy9448 428 CTVFAYGQTGTGKTFTMEGE 447 (583)
Q Consensus 428 ~~i~ayGqtgsGKT~Tm~G~ 447 (583)
..||..|..|+||||+|...
T Consensus 7 l~I~~~~kgGvGKTt~a~~l 26 (228)
T 2r8r_A 7 LKVFLGAAPGVGKTYAMLQA 26 (228)
T ss_dssp EEEEEESSTTSSHHHHHHHH
T ss_pred EEEEEECCCCCcHHHHHHHH
Confidence 56899999999999998653
No 370
>3b85_A Phosphate starvation-inducible protein; PHOH2, ATPase, PFAM: PF02562, ST genomics, PSI-2, protein structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032}
Probab=26.63 E-value=16 Score=34.00 Aligned_cols=25 Identities=32% Similarity=0.607 Sum_probs=16.5
Q ss_pred hHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 418 LIDEVLSGYNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 418 ~v~~~l~G~n~~i~ayGqtgsGKT~Tm 444 (583)
+++.+-.|-- +.-.|++|||||..+
T Consensus 15 ~l~~i~~Ge~--~~liG~nGsGKSTLl 39 (208)
T 3b85_A 15 YVDAIDTNTI--VFGLGPAGSGKTYLA 39 (208)
T ss_dssp HHHHHHHCSE--EEEECCTTSSTTHHH
T ss_pred HHHhccCCCE--EEEECCCCCCHHHHH
Confidence 4455545544 344799999999554
No 371
>1knq_A Gluconate kinase; ALFA/beta structure, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.17 PDB: 1ko1_A 1ko4_A 1ko5_A* 1ko8_A* 1kof_A*
Probab=26.61 E-value=17 Score=32.06 Aligned_cols=17 Identities=24% Similarity=0.368 Sum_probs=13.7
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 49 CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm 65 (583)
..|.-.|+.|||||+.+
T Consensus 9 ~~i~l~G~~GsGKSTl~ 25 (175)
T 1knq_A 9 HIYVLMGVSGSGKSAVA 25 (175)
T ss_dssp EEEEEECSTTSCHHHHH
T ss_pred cEEEEEcCCCCCHHHHH
Confidence 35778899999998765
No 372
>2qor_A Guanylate kinase; phosphotransferase, purine metabolism, structural genomics, structural genomics of pathogenic protozoa consortium; HET: 5GP POP; 1.80A {Plasmodium vivax}
Probab=26.58 E-value=19 Score=32.96 Aligned_cols=16 Identities=25% Similarity=0.497 Sum_probs=12.7
Q ss_pred eEEEeeccCCCceEEe
Q psy9448 50 TVFAYGQTGTGKTFTM 65 (583)
Q Consensus 50 ~i~ayGqtgSGKT~Tm 65 (583)
.|+..|++|||||...
T Consensus 14 ~i~l~G~sGsGKsTl~ 29 (204)
T 2qor_A 14 PLVVCGPSGVGKGTLI 29 (204)
T ss_dssp CEEEECCTTSCHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4677899999998644
No 373
>1e9r_A Conjugal transfer protein TRWB; coupling protein, bacterial conjugation, F1-ATPase-like quaternary structure, ring helicases; 2.4A {Escherichia coli} SCOP: c.37.1.11 PDB: 1e9s_A 1gki_A* 1gl7_A* 1gl6_A*
Probab=26.47 E-value=12 Score=38.81 Aligned_cols=19 Identities=32% Similarity=0.480 Sum_probs=16.2
Q ss_pred cceeEEEeeccCCCceEEe
Q psy9448 426 YNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 426 ~n~~i~ayGqtgsGKT~Tm 444 (583)
.+..++..|.||||||.++
T Consensus 52 ~~~h~~i~G~tGsGKs~~~ 70 (437)
T 1e9r_A 52 EPRHLLVNGATGTGKSVLL 70 (437)
T ss_dssp GGGCEEEEECTTSSHHHHH
T ss_pred CcceEEEECCCCCCHHHHH
Confidence 3567899999999999876
No 374
>4ag6_A VIRB4 ATPase, type IV secretory pathway VIRB4 components-like P; hydrolase, type IV secretion, conjugation; 2.35A {Thermoanaerobacter pseudethanolicus} PDB: 4ag5_A
Probab=26.46 E-value=12 Score=38.31 Aligned_cols=18 Identities=33% Similarity=0.523 Sum_probs=14.8
Q ss_pred ceeEEEeeccCCCceEEe
Q psy9448 427 NCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 427 n~~i~ayGqtgsGKT~Tm 444 (583)
|..++..|++|||||+++
T Consensus 35 ~~~~~i~G~~G~GKs~~~ 52 (392)
T 4ag6_A 35 NSNWTILAKPGAGKSFTA 52 (392)
T ss_dssp CCCEEEECCTTSSHHHHH
T ss_pred cCceEEEcCCCCCHHHHH
Confidence 455678899999999776
No 375
>1uaa_A REP helicase, protein (ATP-dependent DNA helicase REP.); complex (helicase/DNA), DNA unwinding, hydrolase/DNA complex; HET: DNA; 3.00A {Escherichia coli} SCOP: c.37.1.19 c.37.1.19
Probab=26.34 E-value=15 Score=40.61 Aligned_cols=22 Identities=18% Similarity=0.221 Sum_probs=18.3
Q ss_pred ccceeEEEeeccCCCceEEeec
Q psy9448 46 GYNCTVFAYGQTGTGKTFTMEG 67 (583)
Q Consensus 46 G~n~~i~ayGqtgSGKT~Tm~G 67 (583)
-.++.++..|..|||||++|..
T Consensus 13 ~~~~~~lV~AgaGSGKT~~l~~ 34 (673)
T 1uaa_A 13 FVTGPCLVLAGAGSGKTRVITN 34 (673)
T ss_dssp CCSSEEEECCCTTSCHHHHHHH
T ss_pred CCCCCEEEEeCCCCChHHHHHH
Confidence 3467788899999999999963
No 376
>1e6c_A Shikimate kinase; phosphoryl transfer, ADP, shikimate pathway, P-loop protein, transferase; 1.8A {Erwinia chrysanthemi} SCOP: c.37.1.2 PDB: 1shk_A 2shk_A*
Probab=26.21 E-value=17 Score=31.98 Aligned_cols=16 Identities=31% Similarity=0.474 Sum_probs=13.0
Q ss_pred eEEEeeccCCCceEEe
Q psy9448 50 TVFAYGQTGTGKTFTM 65 (583)
Q Consensus 50 ~i~ayGqtgSGKT~Tm 65 (583)
.|+-.|..|||||+..
T Consensus 4 ~I~l~G~~GsGKsT~a 19 (173)
T 1e6c_A 4 PIFMVGARGCGMTTVG 19 (173)
T ss_dssp CEEEESCTTSSHHHHH
T ss_pred eEEEECCCCCCHHHHH
Confidence 4778899999998654
No 377
>3nbx_X ATPase RAVA; AAA+ ATPase, alpha-beta-alpha structure, rossman fold, hydro; HET: ADP; 2.91A {Escherichia coli}
Probab=26.09 E-value=23 Score=37.79 Aligned_cols=25 Identities=32% Similarity=0.489 Sum_probs=17.8
Q ss_pred hHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 418 LIDEVLSGYNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 418 ~v~~~l~G~n~~i~ayGqtgsGKT~Tm 444 (583)
++..++.|. .|+-||++|+|||+..
T Consensus 34 l~~al~~~~--~VLL~GpPGtGKT~LA 58 (500)
T 3nbx_X 34 CLLAALSGE--SVFLLGPPGIAKSLIA 58 (500)
T ss_dssp HHHHHHHTC--EEEEECCSSSSHHHHH
T ss_pred HHHHHhcCC--eeEeecCchHHHHHHH
Confidence 344445554 6788999999999754
No 378
>3pxi_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 6.93A {Bacillus subtilis}
Probab=26.02 E-value=29 Score=38.93 Aligned_cols=32 Identities=25% Similarity=0.375 Sum_probs=23.1
Q ss_pred hhhhHHHHhcccceeEEEeeccCCCceEEeec
Q psy9448 415 VNPLIDEVLSGYNCTVFAYGQTGTGKTFTMEG 446 (583)
Q Consensus 415 ~~~~v~~~l~G~n~~i~ayGqtgsGKT~Tm~G 446 (583)
+..+++.+..+....++-||++|+|||....+
T Consensus 189 i~~l~~~l~~~~~~~vLL~G~pGtGKT~la~~ 220 (758)
T 3pxi_A 189 IQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEG 220 (758)
T ss_dssp HHHHHHHHHCSSSCEEEEESCTTTTTHHHHHH
T ss_pred HHHHHHHHhCCCCCCeEEECCCCCCHHHHHHH
Confidence 34455555556666789999999999977654
No 379
>1uf9_A TT1252 protein; P-loop, nucleotide binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ATP; 2.80A {Thermus thermophilus} SCOP: c.37.1.1
Probab=25.97 E-value=21 Score=32.16 Aligned_cols=20 Identities=20% Similarity=0.210 Sum_probs=15.5
Q ss_pred ccceeEEEeeccCCCceEEe
Q psy9448 46 GYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 46 G~n~~i~ayGqtgSGKT~Tm 65 (583)
+..-.|.-.|++|||||+..
T Consensus 6 ~~~~~I~i~G~~GsGKST~~ 25 (203)
T 1uf9_A 6 KHPIIIGITGNIGSGKSTVA 25 (203)
T ss_dssp CCCEEEEEEECTTSCHHHHH
T ss_pred cCceEEEEECCCCCCHHHHH
Confidence 44556888999999998654
No 380
>2fna_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE ADP; 2.00A {Sulfolobus solfataricus} SCOP: a.4.5.11 c.37.1.20
Probab=25.92 E-value=17 Score=35.96 Aligned_cols=17 Identities=24% Similarity=0.298 Sum_probs=15.3
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 49 CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm 65 (583)
..++.+|+.|+|||..+
T Consensus 31 ~~v~i~G~~G~GKT~L~ 47 (357)
T 2fna_A 31 PITLVLGLRRTGKSSII 47 (357)
T ss_dssp SEEEEEESTTSSHHHHH
T ss_pred CcEEEECCCCCCHHHHH
Confidence 58899999999999876
No 381
>1vma_A Cell division protein FTSY; TM0570, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics; HET: CIT; 1.60A {Thermotoga maritima} SCOP: a.24.13.1 c.37.1.10
Probab=25.81 E-value=14 Score=36.88 Aligned_cols=17 Identities=35% Similarity=0.556 Sum_probs=14.8
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 49 CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm 65 (583)
..|+..|++|+|||+|+
T Consensus 105 ~vi~ivG~~GsGKTTl~ 121 (306)
T 1vma_A 105 FVIMVVGVNGTGKTTSC 121 (306)
T ss_dssp EEEEEECCTTSSHHHHH
T ss_pred eEEEEEcCCCChHHHHH
Confidence 46778899999999988
No 382
>1f2t_A RAD50 ABC-ATPase; DNA double-strand break repair, replication; 1.60A {Pyrococcus furiosus} SCOP: c.37.1.12 PDB: 1f2u_A* 1us8_A*
Probab=25.81 E-value=23 Score=30.85 Aligned_cols=16 Identities=31% Similarity=0.534 Sum_probs=12.7
Q ss_pred eEEEeeccCCCceEEe
Q psy9448 50 TVFAYGQTGTGKTFTM 65 (583)
Q Consensus 50 ~i~ayGqtgSGKT~Tm 65 (583)
..+-+|++|||||..|
T Consensus 25 ~~~I~G~NGsGKStil 40 (149)
T 1f2t_A 25 INLIIGQNGSGKSSLL 40 (149)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred eEEEECCCCCCHHHHH
Confidence 3457899999999754
No 383
>1via_A Shikimate kinase; structural genomics, transferase; HET: MSE; 1.57A {Campylobacter jejuni} SCOP: c.37.1.2
Probab=25.79 E-value=17 Score=32.19 Aligned_cols=16 Identities=25% Similarity=0.403 Sum_probs=12.8
Q ss_pred eEEEeeccCCCceEEe
Q psy9448 50 TVFAYGQTGTGKTFTM 65 (583)
Q Consensus 50 ~i~ayGqtgSGKT~Tm 65 (583)
.|+..|+.|||||+..
T Consensus 6 ~i~i~G~~GsGKsTla 21 (175)
T 1via_A 6 NIVFIGFMGSGKSTLA 21 (175)
T ss_dssp CEEEECCTTSCHHHHH
T ss_pred EEEEEcCCCCCHHHHH
Confidence 3677899999998753
No 384
>2ce7_A Cell division protein FTSH; metalloprotease; HET: ADP; 2.44A {Thermotoga maritima} SCOP: a.269.1.1 c.37.1.20 PDB: 2cea_A* 3kds_E*
Probab=25.76 E-value=14 Score=39.17 Aligned_cols=17 Identities=35% Similarity=0.526 Sum_probs=14.3
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 428 CTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 428 ~~i~ayGqtgsGKT~Tm 444 (583)
..|+-||++|+|||+.+
T Consensus 50 ~gvLL~GppGtGKT~La 66 (476)
T 2ce7_A 50 KGILLVGPPGTGKTLLA 66 (476)
T ss_dssp SEEEEECCTTSSHHHHH
T ss_pred CeEEEECCCCCCHHHHH
Confidence 45899999999999654
No 385
>4a2p_A RIG-I, retinoic acid inducible protein I; hydrolase, superfamily 2 RNA helicase, ATP and dsRNA binding antiviral signalling pathway; 3.00A {Anas platyrhynchos} PDB: 4a36_A*
Probab=25.70 E-value=26 Score=37.07 Aligned_cols=25 Identities=36% Similarity=0.605 Sum_probs=18.8
Q ss_pred hHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 418 LIDEVLSGYNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 418 ~v~~~l~G~n~~i~ayGqtgsGKT~Tm 444 (583)
.+..+++|.+ ++..++||||||.+.
T Consensus 15 ~i~~~~~~~~--~l~~~~tGsGKT~~~ 39 (556)
T 4a2p_A 15 LAQPAINGKN--ALICAPTGSGKTFVS 39 (556)
T ss_dssp HHHHHHTTCC--EEEECCTTSCHHHHH
T ss_pred HHHHHHcCCC--EEEEcCCCChHHHHH
Confidence 4555677766 677899999999764
No 386
>1gku_B Reverse gyrase, TOP-RG; topoisomerase, DNA supercoiling, archaea, helicase; 2.7A {Archaeoglobus fulgidus} SCOP: c.37.1.16 c.37.1.16 e.10.1.1 PDB: 1gl9_B*
Probab=25.57 E-value=24 Score=41.45 Aligned_cols=24 Identities=29% Similarity=0.254 Sum_probs=18.6
Q ss_pred hhHHHHhcccceeEEEeeccCCCceE
Q psy9448 38 PLIDEVLSGYNCTVFAYGQTGTGKTF 63 (583)
Q Consensus 38 plv~~~l~G~n~~i~ayGqtgSGKT~ 63 (583)
..+..+++|.| ++..++||||||.
T Consensus 63 ~ai~~il~g~d--vlv~apTGSGKTl 86 (1054)
T 1gku_B 63 MWAKRILRKES--FAATAPTGVGKTS 86 (1054)
T ss_dssp HHHHHHHTTCC--EECCCCBTSCSHH
T ss_pred HHHHHHHhCCC--EEEEcCCCCCHHH
Confidence 45667778866 5778999999994
No 387
>2r2a_A Uncharacterized protein; zonular occludens toxin, structural genomics, APC84050.2, PS protein structure initiative; HET: MSE; 1.82A {Neisseria meningitidis MC58}
Probab=25.48 E-value=18 Score=33.56 Aligned_cols=16 Identities=38% Similarity=0.671 Sum_probs=13.4
Q ss_pred eEEEeeccCCCceEEe
Q psy9448 50 TVFAYGQTGTGKTFTM 65 (583)
Q Consensus 50 ~i~ayGqtgSGKT~Tm 65 (583)
.++-.|..|||||+.+
T Consensus 7 i~l~tG~pGsGKT~~a 22 (199)
T 2r2a_A 7 ICLITGTPGSGKTLKM 22 (199)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred EEEEEeCCCCCHHHHH
Confidence 3567899999999865
No 388
>1s96_A Guanylate kinase, GMP kinase; E.coli, dimer, SAD, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.1 PDB: 2an9_A* 2anb_A* 2anc_A 2f3r_A* 2f3t_A*
Probab=25.33 E-value=14 Score=34.76 Aligned_cols=16 Identities=19% Similarity=0.324 Sum_probs=13.0
Q ss_pred eEEEeeccCCCceEEe
Q psy9448 50 TVFAYGQTGTGKTFTM 65 (583)
Q Consensus 50 ~i~ayGqtgSGKT~Tm 65 (583)
.+.-.|++|||||..+
T Consensus 18 ii~l~GpsGsGKSTLl 33 (219)
T 1s96_A 18 LYIVSAPSGAGKSSLI 33 (219)
T ss_dssp EEEEECCTTSCHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4566799999999765
No 389
>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9
Probab=25.29 E-value=30 Score=38.52 Aligned_cols=20 Identities=40% Similarity=0.453 Sum_probs=18.7
Q ss_pred cccceeEEEeeccCCCceEE
Q psy9448 45 SGYNCTVFAYGQTGTGKTFT 64 (583)
Q Consensus 45 ~G~n~~i~ayGqtgSGKT~T 64 (583)
++.|.||+.-|.+|||||.+
T Consensus 91 ~~~nQsIiisGESGAGKTe~ 110 (697)
T 1lkx_A 91 SQENQCVIISGESGAGKTEA 110 (697)
T ss_dssp HCCCEEEEEECSTTSSHHHH
T ss_pred cCCCcEEEecCCCCCCchhh
Confidence 69999999999999999965
No 390
>3kta_A Chromosome segregation protein SMC; structural maintenance of chromosomes, ABC ATPase, CFTR adenylate kinase, AP5A, transferase; HET: AP5; 1.63A {Pyrococcus furiosus} PDB: 1xex_A* 1xew_X*
Probab=25.20 E-value=24 Score=31.38 Aligned_cols=16 Identities=25% Similarity=0.266 Sum_probs=13.1
Q ss_pred eEEEeeccCCCceEEe
Q psy9448 50 TVFAYGQTGTGKTFTM 65 (583)
Q Consensus 50 ~i~ayGqtgSGKT~Tm 65 (583)
...-+|++|||||..+
T Consensus 28 ~~~i~G~NGsGKStll 43 (182)
T 3kta_A 28 FTAIVGANGSGKSNIG 43 (182)
T ss_dssp EEEEEECTTSSHHHHH
T ss_pred cEEEECCCCCCHHHHH
Confidence 4567899999999765
No 391
>4b3f_X DNA-binding protein smubp-2; hydrolase, helicase; 2.50A {Homo sapiens} PDB: 4b3g_A
Probab=25.19 E-value=13 Score=41.02 Aligned_cols=27 Identities=33% Similarity=0.283 Sum_probs=17.9
Q ss_pred hHHHHhcccceeEEEeeccCCCceEEee
Q psy9448 418 LIDEVLSGYNCTVFAYGQTGTGKTFTME 445 (583)
Q Consensus 418 ~v~~~l~G~n~~i~ayGqtgsGKT~Tm~ 445 (583)
.|..++..-. -.+-.|+.|||||+|+.
T Consensus 197 AV~~al~~~~-~~lI~GPPGTGKT~ti~ 223 (646)
T 4b3f_X 197 AVLFALSQKE-LAIIHGPPGTGKTTTVV 223 (646)
T ss_dssp HHHHHHHCSS-EEEEECCTTSCHHHHHH
T ss_pred HHHHHhcCCC-ceEEECCCCCCHHHHHH
Confidence 3444454322 34577999999999974
No 392
>3t61_A Gluconokinase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium, nysgrc; 2.20A {Sinorhizobium meliloti}
Probab=25.15 E-value=18 Score=32.94 Aligned_cols=17 Identities=24% Similarity=0.438 Sum_probs=14.0
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 49 CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm 65 (583)
..|+-.|..|||||+..
T Consensus 19 ~~I~l~G~~GsGKSTla 35 (202)
T 3t61_A 19 GSIVVMGVSGSGKSSVG 35 (202)
T ss_dssp SCEEEECSTTSCHHHHH
T ss_pred eEEEEECCCCCCHHHHH
Confidence 46788999999999754
No 393
>2vli_A Antibiotic resistance protein; transferase, tunicamycin, phosphotransferase; 1.95A {Deinococcus radiodurans}
Probab=25.14 E-value=18 Score=32.04 Aligned_cols=17 Identities=35% Similarity=0.503 Sum_probs=9.8
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 49 CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm 65 (583)
..|+-.|..|||||+..
T Consensus 6 ~~I~l~G~~GsGKST~a 22 (183)
T 2vli_A 6 PIIWINGPFGVGKTHTA 22 (183)
T ss_dssp CEEEEECCC----CHHH
T ss_pred eEEEEECCCCCCHHHHH
Confidence 35788999999998754
No 394
>2iyv_A Shikimate kinase, SK; transferase, aromatic amino acid biosynthesis, P-loop kinase, metal- binding, shikimate pathway; HET: ADP; 1.35A {Mycobacterium tuberculosis} SCOP: c.37.1.2 PDB: 2iyr_A* 2iyq_A* 2iyt_A 2iyu_A* 2iys_A* 2iyw_A* 2iyx_A* 2iyy_A* 2iyz_A* 2g1k_A* 1l4y_A* 1u8a_A* 1we2_A* 1zyu_A* 2dfn_A* 2dft_A* 2g1j_A 1l4u_A* 3baf_A*
Probab=25.12 E-value=18 Score=32.25 Aligned_cols=15 Identities=27% Similarity=0.439 Sum_probs=12.6
Q ss_pred eEEEeeccCCCceEE
Q psy9448 50 TVFAYGQTGTGKTFT 64 (583)
Q Consensus 50 ~i~ayGqtgSGKT~T 64 (583)
.|+..|..|||||+.
T Consensus 4 ~I~l~G~~GsGKsT~ 18 (184)
T 2iyv_A 4 KAVLVGLPGSGKSTI 18 (184)
T ss_dssp SEEEECSTTSSHHHH
T ss_pred eEEEECCCCCCHHHH
Confidence 477889999999865
No 395
>2qmh_A HPR kinase/phosphorylase; V267F mutation, ATP-binding, carbohydrate metabolism, magnesium, metal-binding, multifunctional enzyme; 2.60A {Lactobacillus casei} PDB: 1jb1_A 1kkl_A 1kkm_A*
Probab=25.08 E-value=19 Score=33.56 Aligned_cols=20 Identities=35% Similarity=0.478 Sum_probs=15.4
Q ss_pred ccceeEEEeeccCCCceEEe
Q psy9448 46 GYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 46 G~n~~i~ayGqtgSGKT~Tm 65 (583)
-....|+-.|+||+|||...
T Consensus 32 ~~g~~ilI~GpsGsGKStLA 51 (205)
T 2qmh_A 32 IYGLGVLITGDSGVGKSETA 51 (205)
T ss_dssp ETTEEEEEECCCTTTTHHHH
T ss_pred ECCEEEEEECCCCCCHHHHH
Confidence 34456888999999998655
No 396
>4a2q_A RIG-I, retinoic acid inducible protein I; hydrolase, superfamily 2 RNA helicase, ATP and dsRNA binding antiviral signalling pathway; 3.40A {Anas platyrhynchos}
Probab=25.02 E-value=28 Score=39.36 Aligned_cols=26 Identities=35% Similarity=0.575 Sum_probs=19.7
Q ss_pred hhHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 38 PLIDEVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 38 plv~~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
..+..+++|.| ++..++||||||.+.
T Consensus 255 ~~i~~~l~~~~--~ll~~~TGsGKTl~~ 280 (797)
T 4a2q_A 255 ELAQPAINGKN--ALICAPTGSGKTFVS 280 (797)
T ss_dssp HHHHHHHTTCC--EEEECCTTSCHHHHH
T ss_pred HHHHHHHhCCC--EEEEeCCCChHHHHH
Confidence 35667778876 467789999999764
No 397
>2bwj_A Adenylate kinase 5; phosphoryl transfer reaction, transferase; HET: AMP; 2.3A {Homo sapiens}
Probab=24.99 E-value=19 Score=32.41 Aligned_cols=16 Identities=31% Similarity=0.571 Sum_probs=13.4
Q ss_pred eEEEeeccCCCceEEe
Q psy9448 50 TVFAYGQTGTGKTFTM 65 (583)
Q Consensus 50 ~i~ayGqtgSGKT~Tm 65 (583)
.|+-.|..|||||+..
T Consensus 14 ~I~l~G~~GsGKsT~a 29 (199)
T 2bwj_A 14 IIFIIGGPGSGKGTQC 29 (199)
T ss_dssp EEEEEECTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 5788899999998754
No 398
>1n0w_A DNA repair protein RAD51 homolog 1; DNA repair, homologous recombination, breast cancer susceptibility, RECA-like ATPase, protein complex; HET: DNA MSE; 1.70A {Homo sapiens} SCOP: c.37.1.11
Probab=24.98 E-value=31 Score=32.02 Aligned_cols=31 Identities=26% Similarity=0.344 Sum_probs=21.7
Q ss_pred hhhhHHHHhc-ccc--eeEEEeeccCCCceEEee
Q psy9448 415 VNPLIDEVLS-GYN--CTVFAYGQTGTGKTFTME 445 (583)
Q Consensus 415 ~~~~v~~~l~-G~n--~~i~ayGqtgsGKT~Tm~ 445 (583)
.-+-++.++. |.. ..+.-+|++|+|||..+.
T Consensus 9 G~~~LD~~l~ggi~~G~~~~i~G~~GsGKTtl~~ 42 (243)
T 1n0w_A 9 GSKELDKLLQGGIETGSITEMFGEFRTGKTQICH 42 (243)
T ss_dssp SCHHHHHHTTTSEETTSEEEEECCTTSSHHHHHH
T ss_pred CChHHHHhhcCCCcCCeEEEEECCCCCcHHHHHH
Confidence 3456677774 333 467788999999997653
No 399
>3cf2_A TER ATPase, transitional endoplasmic reticulum ATPase, valosi; AAA, CDC48, ERAD, transport protein; HET: ADP ANP; 3.50A {Mus musculus} PDB: 3cf1_A* 3cf3_A* 1r7r_A*
Probab=24.98 E-value=22 Score=40.35 Aligned_cols=50 Identities=24% Similarity=0.436 Sum_probs=32.0
Q ss_pred ccccccccccccccceeehhhhhhhHH-HHhcccc----eeEEEeeccCCCceEE
Q psy9448 394 TFGFDRVFSQESKQVDVYKYVVNPLID-EVLSGYN----CTVFAYGQTGTGKTFT 443 (583)
Q Consensus 394 ~f~fD~vf~~~~~q~~vy~~~~~~~v~-~~l~G~n----~~i~ayGqtgsGKT~T 443 (583)
.-+||.|-+-+..-+++.+.+..|+.. ..+.++. ..|+-||+.|+|||..
T Consensus 200 ~v~~~dIgGl~~~~~~l~e~v~~pl~~p~~f~~~g~~~p~GILL~GPPGTGKT~L 254 (806)
T 3cf2_A 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLI 254 (806)
T ss_dssp SCCGGGCCSCCTTHHHHHHHHHHHHHCCGGGTSCCCCCCCEEEEECCTTSCHHHH
T ss_pred CCChhhhcCHHHHHHHHHHHHHHHccCHHHHhhcCCCCCCeEEEECCCCCCHHHH
Confidence 356777766655555555554455543 3555544 4699999999999843
No 400
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=24.90 E-value=21 Score=33.28 Aligned_cols=30 Identities=43% Similarity=0.578 Sum_probs=21.6
Q ss_pred hhhhHHHHhc-cc--ceeEEEeeccCCCceEEe
Q psy9448 36 VNPLIDEVLS-GY--NCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 36 ~~plv~~~l~-G~--n~~i~ayGqtgSGKT~Tm 65 (583)
+-|-+|.++. |+ ...++-+|.+|+|||.-+
T Consensus 15 Gi~~LD~~l~GGl~~G~l~~i~G~pG~GKT~l~ 47 (251)
T 2zts_A 15 GIPGFDELIEGGFPEGTTVLLTGGTGTGKTTFA 47 (251)
T ss_dssp SCTTTGGGTTTSEETTCEEEEECCTTSSHHHHH
T ss_pred CcHHHHHhhcCCCCCCeEEEEEeCCCCCHHHHH
Confidence 3455678886 44 356788999999998543
No 401
>1htw_A HI0065; nucleotide-binding fold, structural genomics, structure 2 function project, S2F, unknown function; HET: ADP; 1.70A {Haemophilus influenzae} SCOP: c.37.1.18 PDB: 1fl9_A
Probab=24.90 E-value=14 Score=32.74 Aligned_cols=18 Identities=33% Similarity=0.486 Sum_probs=14.4
Q ss_pred eeEEEeeccCCCceEEee
Q psy9448 49 CTVFAYGQTGTGKTFTME 66 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm~ 66 (583)
..+.-.|+.|||||..+-
T Consensus 34 e~v~L~G~nGaGKTTLlr 51 (158)
T 1htw_A 34 IMVYLNGDLGAGKTTLTR 51 (158)
T ss_dssp EEEEEECSTTSSHHHHHH
T ss_pred CEEEEECCCCCCHHHHHH
Confidence 356678999999998763
No 402
>4a74_A DNA repair and recombination protein RADA; hydrolase, recombinase; HET: DNA ANP; 1.48A {Pyrococcus furiosus} PDB: 4a6x_A* 4a6p_A* 4a7o_A*
Probab=24.84 E-value=19 Score=33.10 Aligned_cols=29 Identities=28% Similarity=0.495 Sum_probs=19.7
Q ss_pred hhhHHHHhc-ccc--eeEEEeeccCCCceEEe
Q psy9448 416 NPLIDEVLS-GYN--CTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 416 ~~~v~~~l~-G~n--~~i~ayGqtgsGKT~Tm 444 (583)
-+-++.++. |.. -.+.-.|++|||||..+
T Consensus 11 ~~~LD~~l~ggi~~G~~~~l~G~nGsGKSTll 42 (231)
T 4a74_A 11 SKSLDKLLGGGIETQAITEVFGEFGSGKTQLA 42 (231)
T ss_dssp CHHHHHHTTSSEESSEEEEEEESTTSSHHHHH
T ss_pred ChhHHhHhcCCCCCCcEEEEECCCCCCHHHHH
Confidence 345566663 443 45667899999999664
No 403
>2v6i_A RNA helicase; membrane, hydrolase, transmembrane, RNA replication, viral replication, nucleotide-binding; 2.10A {Kokobera virus} PDB: 2v6j_A
Probab=24.82 E-value=22 Score=36.99 Aligned_cols=16 Identities=25% Similarity=0.198 Sum_probs=13.5
Q ss_pred eEEEeeccCCCceEEe
Q psy9448 50 TVFAYGQTGTGKTFTM 65 (583)
Q Consensus 50 ~i~ayGqtgSGKT~Tm 65 (583)
.++..|+||||||...
T Consensus 4 ~~lv~a~TGsGKT~~~ 19 (431)
T 2v6i_A 4 LTVLDLHPGAGKTRRV 19 (431)
T ss_dssp EEEEECCTTSCTTTTH
T ss_pred EEEEEcCCCCCHHHHH
Confidence 4678899999999874
No 404
>3asz_A Uridine kinase; cytidine phosphorylation, transferase; HET: C5P; 2.25A {Thermus thermophilus} PDB: 3asy_A*
Probab=24.77 E-value=15 Score=33.65 Aligned_cols=16 Identities=31% Similarity=0.275 Sum_probs=13.0
Q ss_pred eEEEeeccCCCceEEe
Q psy9448 50 TVFAYGQTGTGKTFTM 65 (583)
Q Consensus 50 ~i~ayGqtgSGKT~Tm 65 (583)
.|.-.|++|||||+.+
T Consensus 8 ~i~i~G~~GsGKSTl~ 23 (211)
T 3asz_A 8 VIGIAGGTASGKTTLA 23 (211)
T ss_dssp EEEEEESTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4556799999999766
No 405
>3lw7_A Adenylate kinase related protein (ADKA-like); AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 2.30A {Sulfolobus solfataricus} PDB: 3h0k_A
Probab=24.75 E-value=21 Score=30.92 Aligned_cols=15 Identities=27% Similarity=0.476 Sum_probs=12.2
Q ss_pred eEEEeeccCCCceEE
Q psy9448 429 TVFAYGQTGTGKTFT 443 (583)
Q Consensus 429 ~i~ayGqtgsGKT~T 443 (583)
.|+-.|..|||||..
T Consensus 3 ~I~l~G~~GsGKsT~ 17 (179)
T 3lw7_A 3 VILITGMPGSGKSEF 17 (179)
T ss_dssp EEEEECCTTSCHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 467789999999953
No 406
>1rif_A DAR protein, DNA helicase UVSW; bacteriophage, RECG, SF2, DNA binding protein; HET: DNA; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.23
Probab=24.72 E-value=22 Score=34.32 Aligned_cols=25 Identities=16% Similarity=0.097 Sum_probs=17.0
Q ss_pred HHHHhcccceeEEEeeccCCCceEEee
Q psy9448 419 IDEVLSGYNCTVFAYGQTGTGKTFTME 445 (583)
Q Consensus 419 v~~~l~G~n~~i~ayGqtgsGKT~Tm~ 445 (583)
+..++++.++ +..++||+|||.+..
T Consensus 122 i~~~l~~~~~--ll~~~tGsGKT~~~~ 146 (282)
T 1rif_A 122 VFEGLVNRRR--ILNLPTSAGRSLIQA 146 (282)
T ss_dssp HHHHHHHSEE--EECCCTTSCHHHHHH
T ss_pred HHHHHhcCCe--EEEcCCCCCcHHHHH
Confidence 4445555443 449999999998764
No 407
>2ce7_A Cell division protein FTSH; metalloprotease; HET: ADP; 2.44A {Thermotoga maritima} SCOP: a.269.1.1 c.37.1.20 PDB: 2cea_A* 3kds_E*
Probab=24.68 E-value=18 Score=38.38 Aligned_cols=17 Identities=35% Similarity=0.526 Sum_probs=14.7
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 49 CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm 65 (583)
..|+-||++|+|||+.+
T Consensus 50 ~gvLL~GppGtGKT~La 66 (476)
T 2ce7_A 50 KGILLVGPPGTGKTLLA 66 (476)
T ss_dssp SEEEEECCTTSSHHHHH
T ss_pred CeEEEECCCCCCHHHHH
Confidence 45899999999999765
No 408
>2dr3_A UPF0273 protein PH0284; RECA superfamily ATPase, hexamer, structural genomics; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=24.68 E-value=32 Score=31.89 Aligned_cols=28 Identities=43% Similarity=0.628 Sum_probs=19.1
Q ss_pred hhHHHHhc-cc--ceeEEEeeccCCCceEEe
Q psy9448 417 PLIDEVLS-GY--NCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 417 ~~v~~~l~-G~--n~~i~ayGqtgsGKT~Tm 444 (583)
+-++.++. |+ ...+.-+|++|+|||..+
T Consensus 10 ~~LD~~l~gGl~~G~~~~i~G~~GsGKTtl~ 40 (247)
T 2dr3_A 10 PGVDEILHGGIPERNVVLLSGGPGTGKTIFS 40 (247)
T ss_dssp TTHHHHTTTSEETTCEEEEEECTTSSHHHHH
T ss_pred hhHHHHcCCCCCCCcEEEEECCCCCCHHHHH
Confidence 34556653 33 246778999999999764
No 409
>1hv8_A Putative ATP-dependent RNA helicase MJ0669; RNA-binding protein, ATPase, RNA binding protein; 3.00A {Methanocaldococcus jannaschii} SCOP: c.37.1.19 c.37.1.19
Probab=24.67 E-value=29 Score=34.27 Aligned_cols=25 Identities=32% Similarity=0.434 Sum_probs=17.7
Q ss_pred HHHHhcccceeEEEeeccCCCceEEe
Q psy9448 419 IDEVLSGYNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 419 v~~~l~G~n~~i~ayGqtgsGKT~Tm 444 (583)
+..+++|. ..++..++||||||.+.
T Consensus 37 i~~~~~~~-~~~l~~~~TGsGKT~~~ 61 (367)
T 1hv8_A 37 IPLFLNDE-YNIVAQARTGSGKTASF 61 (367)
T ss_dssp HHHHHHTC-SEEEEECCSSSSHHHHH
T ss_pred HHHHhCCC-CCEEEECCCCChHHHHH
Confidence 44455563 24678899999999764
No 410
>2ga8_A Hypothetical 39.9 kDa protein; YFR007W, YFH7, unknown function; HET: CME; 1.77A {Saccharomyces cerevisiae} PDB: 2gaa_A*
Probab=24.65 E-value=26 Score=35.69 Aligned_cols=21 Identities=29% Similarity=0.531 Sum_probs=17.2
Q ss_pred cccceeEEEeeccCCCceEEe
Q psy9448 45 SGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 45 ~G~n~~i~ayGqtgSGKT~Tm 65 (583)
.|.-..|+-.|+.|+|||+..
T Consensus 21 ~g~~~~i~l~G~~G~GKTTl~ 41 (359)
T 2ga8_A 21 DNYRVCVILVGSPGSGKSTIA 41 (359)
T ss_dssp TCSCEEEEEECCTTSSHHHHH
T ss_pred cCCeeEEEEECCCCCcHHHHH
Confidence 465567889999999999865
No 411
>3tif_A Uncharacterized ABC transporter ATP-binding prote; nucleotide-binding domain, ABC transporter ATPase; HET: ADP; 1.80A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 1l2t_A* 1f3o_A*
Probab=24.65 E-value=15 Score=34.96 Aligned_cols=16 Identities=31% Similarity=0.515 Sum_probs=13.0
Q ss_pred eEEEeeccCCCceEEe
Q psy9448 50 TVFAYGQTGTGKTFTM 65 (583)
Q Consensus 50 ~i~ayGqtgSGKT~Tm 65 (583)
.+.-.|++|||||..|
T Consensus 33 ~~~iiG~nGsGKSTLl 48 (235)
T 3tif_A 33 FVSIMGPSGSGKSTML 48 (235)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCCcHHHHH
Confidence 4567799999999765
No 412
>1v5w_A DMC1, meiotic recombination protein DMC1/LIM15 homolog; DNA-binding protein, ring protein, octamer, AAA ATPase; 3.20A {Homo sapiens} SCOP: c.37.1.11 PDB: 2zjb_A
Probab=24.64 E-value=32 Score=34.60 Aligned_cols=31 Identities=29% Similarity=0.323 Sum_probs=23.1
Q ss_pred hhhhHHHHhc-cc--ceeEEEeeccCCCceEEee
Q psy9448 36 VNPLIDEVLS-GY--NCTVFAYGQTGTGKTFTME 66 (583)
Q Consensus 36 ~~plv~~~l~-G~--n~~i~ayGqtgSGKT~Tm~ 66 (583)
.-+-++.++. |+ ...+.-||++|||||..+.
T Consensus 107 G~~~LD~~LgGGl~~G~i~~I~G~~GsGKTtla~ 140 (343)
T 1v5w_A 107 GSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSH 140 (343)
T ss_dssp SCHHHHHHTTSSBCSSEEEEEECCTTCTHHHHHH
T ss_pred CChhHHHHhcCCCCCCeEEEEECCCCCCHHHHHH
Confidence 3456788885 44 3567889999999997664
No 413
>1fuu_A Yeast initiation factor 4A; IF4A, helicase, DEAD-box protein, translation; 2.50A {Saccharomyces cerevisiae} SCOP: c.37.1.19 PDB: 2vso_A* 2vsx_A*
Probab=24.63 E-value=19 Score=36.13 Aligned_cols=24 Identities=46% Similarity=0.577 Sum_probs=18.0
Q ss_pred hHHHHhcccceeEEEeeccCCCceEE
Q psy9448 418 LIDEVLSGYNCTVFAYGQTGTGKTFT 443 (583)
Q Consensus 418 ~v~~~l~G~n~~i~ayGqtgsGKT~T 443 (583)
.+..+++|.+ ++..++||||||.+
T Consensus 51 ~i~~i~~~~~--~lv~~~TGsGKT~~ 74 (394)
T 1fuu_A 51 AIMPIIEGHD--VLAQAQSGTGKTGT 74 (394)
T ss_dssp HHHHHHHTCC--EEECCCSSHHHHHH
T ss_pred HHHHHhCCCC--EEEECCCCChHHHH
Confidence 4455566765 57789999999976
No 414
>1pzn_A RAD51, DNA repair and recombination protein RAD51, RADA; heptameric ring, heptamer, ring, oligomer, RAD51 polymerizat motif; HET: DNA; 2.85A {Pyrococcus furiosus} SCOP: a.60.4.1 c.37.1.11
Probab=24.62 E-value=35 Score=34.44 Aligned_cols=30 Identities=27% Similarity=0.427 Sum_probs=22.6
Q ss_pred hhhhHHHHhcc---cceeEEEeeccCCCceEEe
Q psy9448 36 VNPLIDEVLSG---YNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 36 ~~plv~~~l~G---~n~~i~ayGqtgSGKT~Tm 65 (583)
.-|-++.+|.| ....+.-+|++|||||..+
T Consensus 116 G~~~LD~lL~ggi~~G~i~~I~G~~GsGKTTL~ 148 (349)
T 1pzn_A 116 GSKSLDKLLGGGIETQAITEVFGEFGSGKTQLA 148 (349)
T ss_dssp SCHHHHHHHTSSEESSEEEEEEESTTSSHHHHH
T ss_pred CCHHHHHHhcCCCCCCeEEEEECCCCCCHHHHH
Confidence 45667888854 2356788999999999765
No 415
>3t5d_A Septin-7; GTP-binding protein, cytoskeleton, signaling protein; HET: GDP; 3.30A {Homo sapiens} PDB: 3tw4_A*
Probab=24.45 E-value=25 Score=33.87 Aligned_cols=21 Identities=33% Similarity=0.703 Sum_probs=17.0
Q ss_pred cccceeEEEeeccCCCceEEe
Q psy9448 45 SGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 45 ~G~n~~i~ayGqtgSGKT~Tm 65 (583)
.|+...|+..|.+|+|||..+
T Consensus 5 ~g~~~~I~vvG~~g~GKSTLi 25 (274)
T 3t5d_A 5 SGFEFTLMVVGESGLGKSTLI 25 (274)
T ss_dssp --CEEEEEEEECTTSSHHHHH
T ss_pred CccEEEEEEECCCCCCHHHHH
Confidence 588899999999999998654
No 416
>1c9k_A COBU, adenosylcobinamide kinase; alpha/beta structure rossmann fold P-loop, transferase; HET: 5GP; 2.20A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1cbu_A
Probab=24.38 E-value=23 Score=32.31 Aligned_cols=13 Identities=23% Similarity=0.465 Sum_probs=11.4
Q ss_pred EEEeeccCCCceE
Q psy9448 51 VFAYGQTGTGKTF 63 (583)
Q Consensus 51 i~ayGqtgSGKT~ 63 (583)
++.+|.+|||||.
T Consensus 2 ilV~Gg~~SGKS~ 14 (180)
T 1c9k_A 2 ILVTGGARSGKSR 14 (180)
T ss_dssp EEEEECTTSSHHH
T ss_pred EEEECCCCCcHHH
Confidence 6889999999984
No 417
>2oca_A DAR protein, ATP-dependent DNA helicase UVSW; ATP-dependant helicase, T4-bacteriophage, recombination, hydrolase; 2.70A {Enterobacteria phage T4}
Probab=24.36 E-value=26 Score=37.03 Aligned_cols=26 Identities=15% Similarity=0.080 Sum_probs=19.2
Q ss_pred hHHHHhcccceeEEEeeccCCCceEEee
Q psy9448 39 LIDEVLSGYNCTVFAYGQTGTGKTFTME 66 (583)
Q Consensus 39 lv~~~l~G~n~~i~ayGqtgSGKT~Tm~ 66 (583)
.|+.+++|.+ ++..|+||||||.+..
T Consensus 121 ai~~~~~~~~--~ll~~~tGsGKT~~~~ 146 (510)
T 2oca_A 121 AVFEGLVNRR--RILNLPTSAGRSLIQA 146 (510)
T ss_dssp HHHHHHHHSE--EEEECCSTTTHHHHHH
T ss_pred HHHHHHhcCC--cEEEeCCCCCHHHHHH
Confidence 4566666754 4677999999998864
No 418
>1wp9_A ATP-dependent RNA helicase, putative; ATPase, DNA replication, DNA repair, DNA recombina hydrolase; 2.90A {Pyrococcus furiosus} SCOP: c.37.1.19 c.37.1.19
Probab=24.18 E-value=28 Score=35.65 Aligned_cols=25 Identities=20% Similarity=0.199 Sum_probs=18.5
Q ss_pred hHHHHhcccceeEEEeeccCCCceEEee
Q psy9448 39 LIDEVLSGYNCTVFAYGQTGTGKTFTME 66 (583)
Q Consensus 39 lv~~~l~G~n~~i~ayGqtgSGKT~Tm~ 66 (583)
.+..+++| .++..++||+|||.+..
T Consensus 17 ~i~~~~~~---~~ll~~~tG~GKT~~~~ 41 (494)
T 1wp9_A 17 IYAKCKET---NCLIVLPTGLGKTLIAM 41 (494)
T ss_dssp HHHHGGGS---CEEEECCTTSCHHHHHH
T ss_pred HHHHHhhC---CEEEEcCCCCCHHHHHH
Confidence 45667777 44567899999998764
No 419
>1cr0_A DNA primase/helicase; RECA-type protein fold, transferase; HET: DNA; 2.30A {Enterobacteria phage T7} SCOP: c.37.1.11 PDB: 1cr1_A* 1cr2_A* 1cr4_A* 1e0j_A* 1e0k_A*
Probab=24.07 E-value=22 Score=34.61 Aligned_cols=28 Identities=18% Similarity=0.234 Sum_probs=21.4
Q ss_pred hhHHHHhcccc--eeEEEeeccCCCceEEe
Q psy9448 38 PLIDEVLSGYN--CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 38 plv~~~l~G~n--~~i~ayGqtgSGKT~Tm 65 (583)
+.++.+.-|+. ..+.-.|++|+|||..+
T Consensus 23 ~~Ld~i~~~l~~G~~~~i~G~~G~GKTTl~ 52 (296)
T 1cr0_A 23 TGINDKTLGARGGEVIMVTSGSGMGKSTFV 52 (296)
T ss_dssp TTHHHHHCSBCTTCEEEEEESTTSSHHHHH
T ss_pred HHHHHHhcCCCCCeEEEEEeCCCCCHHHHH
Confidence 56777776654 35778899999999876
No 420
>3a8t_A Adenylate isopentenyltransferase; rossmann fold protein; HET: ATP; 2.37A {Humulus lupulus}
Probab=24.07 E-value=24 Score=35.72 Aligned_cols=15 Identities=40% Similarity=0.534 Sum_probs=13.0
Q ss_pred eEEEeeccCCCceEE
Q psy9448 50 TVFAYGQTGTGKTFT 64 (583)
Q Consensus 50 ~i~ayGqtgSGKT~T 64 (583)
.|+-.|+||||||..
T Consensus 42 lIvI~GPTgsGKTtL 56 (339)
T 3a8t_A 42 LLVLMGATGTGKSRL 56 (339)
T ss_dssp EEEEECSTTSSHHHH
T ss_pred eEEEECCCCCCHHHH
Confidence 688999999999854
No 421
>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ...
Probab=24.02 E-value=33 Score=38.65 Aligned_cols=21 Identities=29% Similarity=0.431 Sum_probs=19.0
Q ss_pred cccceeEEEeeccCCCceEEe
Q psy9448 45 SGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 45 ~G~n~~i~ayGqtgSGKT~Tm 65 (583)
++.|.||+.-|.+|||||.+.
T Consensus 169 ~~~nQsIiisGESGAGKTe~t 189 (770)
T 1w9i_A 169 DRQNQSLLITGESGAGKTENT 189 (770)
T ss_dssp HCCCEEEEEECSTTSSHHHHH
T ss_pred hcCCcEEEEecCCCCcchHHH
Confidence 699999999999999999653
No 422
>2z43_A DNA repair and recombination protein RADA; archaea, filament, DNA binding, molecular SWI RECA, DMC1; HET: DNA; 1.93A {Sulfolobus solfataricus} PDB: 2bke_A* 2dfl_A* 2zub_A* 2zuc_A* 2zud_A*
Probab=24.01 E-value=33 Score=34.09 Aligned_cols=31 Identities=26% Similarity=0.387 Sum_probs=23.2
Q ss_pred hhhhHHHHhc-cc--ceeEEEeeccCCCceEEee
Q psy9448 36 VNPLIDEVLS-GY--NCTVFAYGQTGTGKTFTME 66 (583)
Q Consensus 36 ~~plv~~~l~-G~--n~~i~ayGqtgSGKT~Tm~ 66 (583)
.-+-++.++. |+ ...+.-||++|||||..+.
T Consensus 92 G~~~LD~~L~GGl~~G~i~~i~G~~GsGKT~la~ 125 (324)
T 2z43_A 92 GSQALDGLLAGGIETRTMTEFFGEFGSGKTQLCH 125 (324)
T ss_dssp SCHHHHHHTTTSEETTSEEEEEESTTSSHHHHHH
T ss_pred CchhHHHhcCCCCCCCcEEEEECCCCCCHhHHHH
Confidence 4467888885 33 3468889999999997663
No 423
>3rc3_A ATP-dependent RNA helicase SUPV3L1, mitochondrial; SUV3, nucleus, hydrolase; HET: ANP; 2.08A {Homo sapiens} PDB: 3rc8_A
Probab=23.99 E-value=19 Score=40.07 Aligned_cols=21 Identities=29% Similarity=0.558 Sum_probs=15.7
Q ss_pred HHhcccceeEEEeeccCCCceEE
Q psy9448 42 EVLSGYNCTVFAYGQTGTGKTFT 64 (583)
Q Consensus 42 ~~l~G~n~~i~ayGqtgSGKT~T 64 (583)
..++|. .++..|+||||||+.
T Consensus 151 r~l~rk--~vlv~apTGSGKT~~ 171 (677)
T 3rc3_A 151 RAMQRK--IIFHSGPTNSGKTYH 171 (677)
T ss_dssp HTSCCE--EEEEECCTTSSHHHH
T ss_pred HhcCCC--EEEEEcCCCCCHHHH
Confidence 345554 468889999999983
No 424
>1zd8_A GTP:AMP phosphotransferase mitochondrial; ATP:AMP phosphotransferase, myokinase, structural genomics, structural genomics consortium, SGC; 1.48A {Homo sapiens} PDB: 2ak3_A*
Probab=23.95 E-value=20 Score=33.35 Aligned_cols=17 Identities=24% Similarity=0.339 Sum_probs=13.9
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 49 CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm 65 (583)
..|+-.|..|||||+..
T Consensus 8 ~~I~l~G~~GsGKsT~a 24 (227)
T 1zd8_A 8 LRAVIMGAPGSGKGTVS 24 (227)
T ss_dssp CEEEEEECTTSSHHHHH
T ss_pred cEEEEECCCCCCHHHHH
Confidence 35788899999998754
No 425
>2i1q_A DNA repair and recombination protein RADA; ATPase, recombinase, ATP complex, calcium stimulation, RECA, DMC1; HET: DNA ANP; 1.90A {Methanococcus voltae} SCOP: a.60.4.1 c.37.1.11 PDB: 1xu4_A* 2b21_A* 2fpk_A* 2fpl_A* 2fpm_A* 1t4g_A* 3fyh_A* 2f1j_A* 2f1i_A* 2f1h_A* 3ntu_A* 3ewa_A* 3ew9_A* 3etl_A* 4dc9_A* 2gdj_A*
Probab=23.81 E-value=35 Score=33.69 Aligned_cols=31 Identities=32% Similarity=0.397 Sum_probs=23.9
Q ss_pred hhhhHHHHhc-cc--ceeEEEeeccCCCceEEee
Q psy9448 36 VNPLIDEVLS-GY--NCTVFAYGQTGTGKTFTME 66 (583)
Q Consensus 36 ~~plv~~~l~-G~--n~~i~ayGqtgSGKT~Tm~ 66 (583)
.-+-++.++. |+ ...+.-||++|||||..+.
T Consensus 83 G~~~LD~~l~GGl~~g~i~~i~G~~gsGKT~la~ 116 (322)
T 2i1q_A 83 SSSELDSVLGGGLESQSVTEFAGVFGSGKTQIMH 116 (322)
T ss_dssp SCHHHHHHTTSSEETTEEEEEEESTTSSHHHHHH
T ss_pred CChhHHHhcCCCccCCeEEEEECCCCCCHHHHHH
Confidence 4577889885 44 3568899999999997664
No 426
>2zj8_A DNA helicase, putative SKI2-type helicase; RECA fold, ATP-binding, hydrolase, nucleotide- binding; 2.00A {Pyrococcus furiosus} PDB: 2zj5_A* 2zj2_A 2zja_A*
Probab=23.79 E-value=21 Score=39.80 Aligned_cols=21 Identities=29% Similarity=0.390 Sum_probs=15.4
Q ss_pred HhcccceeEEEeeccCCCceEEe
Q psy9448 43 VLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 43 ~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
+.+|. .++..|+||||||...
T Consensus 36 ~~~~~--~~lv~apTGsGKT~~~ 56 (720)
T 2zj8_A 36 ILEGK--NALISIPTASGKTLIA 56 (720)
T ss_dssp GGGTC--EEEEECCGGGCHHHHH
T ss_pred hcCCC--cEEEEcCCccHHHHHH
Confidence 34454 4678899999999654
No 427
>2p5t_B PEZT; postsegregational killing system, phosphoryltransferase, HEL helix motif, transcription regulator; 3.20A {Streptococcus pneumoniae}
Probab=23.64 E-value=34 Score=32.55 Aligned_cols=16 Identities=38% Similarity=0.561 Sum_probs=13.2
Q ss_pred eeEEEeeccCCCceEE
Q psy9448 428 CTVFAYGQTGTGKTFT 443 (583)
Q Consensus 428 ~~i~ayGqtgsGKT~T 443 (583)
..|+-.|+.|||||..
T Consensus 33 ~~i~l~G~~GsGKSTl 48 (253)
T 2p5t_B 33 IAILLGGQSGAGKTTI 48 (253)
T ss_dssp EEEEEESCGGGTTHHH
T ss_pred eEEEEECCCCCCHHHH
Confidence 4678889999999843
No 428
>3sr0_A Adenylate kinase; phosphoryl transfer analogue, ALF4, transferase (phosphotran phosphoryl transfer, nucleotide-binding; HET: ADP AMP; 1.56A {Aquifex aeolicus} PDB: 2rh5_A 2rgx_A*
Probab=23.63 E-value=20 Score=33.33 Aligned_cols=13 Identities=31% Similarity=0.508 Sum_probs=11.1
Q ss_pred EEEeeccCCCceE
Q psy9448 51 VFAYGQTGTGKTF 63 (583)
Q Consensus 51 i~ayGqtgSGKT~ 63 (583)
|+-.|++||||++
T Consensus 3 Iil~GpPGsGKgT 15 (206)
T 3sr0_A 3 LVFLGPPGAGKGT 15 (206)
T ss_dssp EEEECSTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 6778999999974
No 429
>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A*
Probab=23.61 E-value=34 Score=38.72 Aligned_cols=20 Identities=25% Similarity=0.418 Sum_probs=18.5
Q ss_pred cccceeEEEeeccCCCceEE
Q psy9448 45 SGYNCTVFAYGQTGTGKTFT 64 (583)
Q Consensus 45 ~G~n~~i~ayGqtgSGKT~T 64 (583)
++.|.||+.-|.+|||||.+
T Consensus 137 ~~~nQsIiiSGESGAGKTe~ 156 (784)
T 2v26_A 137 LKLSQSIIVSGESGAGKTEN 156 (784)
T ss_dssp HTCCEEEEEECSTTSSHHHH
T ss_pred cCCCcEEEEcCCCCCCceeh
Confidence 69999999999999999955
No 430
>2pt5_A Shikimate kinase, SK; aromatic amino acid biosynthesis, P-loop kinase, SHI kinase, shikimate pathway; 2.10A {Aquifex aeolicus}
Probab=23.55 E-value=20 Score=31.32 Aligned_cols=16 Identities=19% Similarity=0.306 Sum_probs=12.9
Q ss_pred eEEEeeccCCCceEEe
Q psy9448 50 TVFAYGQTGTGKTFTM 65 (583)
Q Consensus 50 ~i~ayGqtgSGKT~Tm 65 (583)
.|+-.|..|||||+..
T Consensus 2 ~I~l~G~~GsGKsT~a 17 (168)
T 2pt5_A 2 RIYLIGFMCSGKSTVG 17 (168)
T ss_dssp EEEEESCTTSCHHHHH
T ss_pred eEEEECCCCCCHHHHH
Confidence 3678899999998653
No 431
>1qf9_A UMP/CMP kinase, protein (uridylmonophosphate/cytidylmonophosphate kinase); nucleoside monophosphate kinase, NMP kinase; HET: ADP C5P; 1.70A {Dictyostelium discoideum} SCOP: c.37.1.1 PDB: 1uke_A* 2ukd_A* 3ukd_A* 4ukd_A* 5ukd_A*
Probab=23.45 E-value=21 Score=31.76 Aligned_cols=16 Identities=38% Similarity=0.623 Sum_probs=13.2
Q ss_pred eEEEeeccCCCceEEe
Q psy9448 50 TVFAYGQTGTGKTFTM 65 (583)
Q Consensus 50 ~i~ayGqtgSGKT~Tm 65 (583)
.|+-.|..|||||+..
T Consensus 8 ~I~l~G~~GsGKsT~~ 23 (194)
T 1qf9_A 8 VVFVLGGPGSGKGTQC 23 (194)
T ss_dssp EEEEEESTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 5778899999998753
No 432
>2c95_A Adenylate kinase 1; transferase, AP4A, nucleotide kinase, transferase ATP-bindi; HET: B4P; 1.71A {Homo sapiens} PDB: 1z83_A* 3adk_A
Probab=23.40 E-value=21 Score=31.97 Aligned_cols=17 Identities=29% Similarity=0.512 Sum_probs=13.8
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 49 CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm 65 (583)
-.|+-.|..|||||+..
T Consensus 10 ~~I~l~G~~GsGKsT~~ 26 (196)
T 2c95_A 10 NIIFVVGGPGSGKGTQC 26 (196)
T ss_dssp CEEEEEECTTSSHHHHH
T ss_pred CEEEEECCCCCCHHHHH
Confidence 35778899999998754
No 433
>1moz_A ARL1, ADP-ribosylation factor-like protein 1; GTP-binding, protein binding; HET: GDP; 3.17A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=23.34 E-value=32 Score=30.08 Aligned_cols=27 Identities=22% Similarity=0.464 Sum_probs=19.5
Q ss_pred hHHHHhc-ccceeEEEeeccCCCceEEe
Q psy9448 39 LIDEVLS-GYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 39 lv~~~l~-G~n~~i~ayGqtgSGKT~Tm 65 (583)
++..++. -...-|...|.+|+|||..+
T Consensus 8 ~~~~~~~~~~~~~i~v~G~~~~GKssli 35 (183)
T 1moz_A 8 MFDKLWGSNKELRILILGLDGAGKTTIL 35 (183)
T ss_dssp HHGGGTTCSSCEEEEEEEETTSSHHHHH
T ss_pred HHHHhcCCCCccEEEEECCCCCCHHHHH
Confidence 3444444 45667899999999999665
No 434
>1ye8_A Protein THEP1, hypothetical UPF0334 kinase-like protein AQ_1292; mixed alpha-beta protein, rossman fold, signaling protein, transferase; 1.40A {Aquifex aeolicus} SCOP: c.37.1.11
Probab=23.26 E-value=15 Score=33.28 Aligned_cols=15 Identities=33% Similarity=0.596 Sum_probs=11.8
Q ss_pred EEEeeccCCCceEEe
Q psy9448 430 VFAYGQTGTGKTFTM 444 (583)
Q Consensus 430 i~ayGqtgsGKT~Tm 444 (583)
+.-.|++|||||..+
T Consensus 3 i~l~G~nGsGKTTLl 17 (178)
T 1ye8_A 3 IIITGEPGVGKTTLV 17 (178)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 445799999999654
No 435
>3umf_A Adenylate kinase; rossmann fold, transferase; 2.05A {Schistosoma mansoni}
Probab=23.24 E-value=20 Score=33.68 Aligned_cols=14 Identities=36% Similarity=0.726 Sum_probs=12.0
Q ss_pred eEEEeeccCCCceE
Q psy9448 50 TVFAYGQTGTGKTF 63 (583)
Q Consensus 50 ~i~ayGqtgSGKT~ 63 (583)
.|+..|+.||||++
T Consensus 31 iI~llGpPGsGKgT 44 (217)
T 3umf_A 31 VIFVLGGPGSGKGT 44 (217)
T ss_dssp EEEEECCTTCCHHH
T ss_pred EEEEECCCCCCHHH
Confidence 57889999999965
No 436
>2qen_A Walker-type ATPase; unknown function; HET: ADP; 2.25A {Pyrococcus abyssi}
Probab=23.23 E-value=31 Score=33.85 Aligned_cols=17 Identities=18% Similarity=0.196 Sum_probs=15.2
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 49 CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm 65 (583)
..++.+|+.|+|||..+
T Consensus 32 ~~v~i~G~~G~GKT~Ll 48 (350)
T 2qen_A 32 PLTLLLGIRRVGKSSLL 48 (350)
T ss_dssp SEEEEECCTTSSHHHHH
T ss_pred CeEEEECCCcCCHHHHH
Confidence 67889999999999876
No 437
>2gk6_A Regulator of nonsense transcripts 1; UPF1, helicase, NMD, hydrolase; HET: ADP; 2.40A {Homo sapiens} PDB: 2gjk_A* 2gk7_A 2xzo_A* 2xzp_A
Probab=23.18 E-value=21 Score=39.25 Aligned_cols=18 Identities=39% Similarity=0.468 Sum_probs=14.7
Q ss_pred eEEEeeccCCCceEEeec
Q psy9448 429 TVFAYGQTGTGKTFTMEG 446 (583)
Q Consensus 429 ~i~ayGqtgsGKT~Tm~G 446 (583)
..+..|+.|||||+|+..
T Consensus 197 ~~li~GppGTGKT~~~~~ 214 (624)
T 2gk6_A 197 LSLIQGPPGTGKTVTSAT 214 (624)
T ss_dssp EEEEECCTTSCHHHHHHH
T ss_pred CeEEECCCCCCHHHHHHH
Confidence 457899999999998643
No 438
>3foz_A TRNA delta(2)-isopentenylpyrophosphate transferas; nucleoside modification, isopentenyl-tRNA transferase, transferase-RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A
Probab=23.01 E-value=25 Score=35.09 Aligned_cols=17 Identities=35% Similarity=0.499 Sum_probs=13.2
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 49 CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm 65 (583)
-.|+..|+||||||...
T Consensus 11 ~~i~i~GptgsGKt~la 27 (316)
T 3foz_A 11 KAIFLMGPTASGKTALA 27 (316)
T ss_dssp EEEEEECCTTSCHHHHH
T ss_pred cEEEEECCCccCHHHHH
Confidence 35778899999998543
No 439
>4etp_B Spindle POLE BODY-associated protein VIK1; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=23.00 E-value=35 Score=33.94 Aligned_cols=207 Identities=14% Similarity=0.140 Sum_probs=110.2
Q ss_pred eeeeehhhcccCCc-eEEEeehhhhhhHHHHh-cccceeEEEeeccCCCceEEeecccCCCCCCCcccCCCCccchhhhh
Q psy9448 14 VVSVMFLVCIFYTT-IVDVYKYVVNPLIDEVL-SGYNCTVFAYGQTGTGKTFTMEGEKSNDPSISWQDDPLSGIVPRAMN 91 (583)
Q Consensus 14 ~~~~~D~Vf~~~~t-q~~vy~~~~~plv~~~l-~G~n~~i~ayGqtgSGKT~Tm~G~~~~~~~~~~~~~~~~Giipr~~~ 91 (583)
..+.|++|++...- -.+++..-.++.++-++ .+.|+.|+..|+. .+ +..-.
T Consensus 92 ~~y~FnRiIp~~~~~e~~~l~qE~q~y~DmcL~~~~NfslIsis~~------------~w---------------~~Lr~ 144 (333)
T 4etp_B 92 HVYKFNRVIPHLKVSEDCFFTQEYSVYHDMALNQKKNFNLISLSTT------------PH---------------GSLRE 144 (333)
T ss_dssp CEEECSEEEETTTCCHHHHHHHTTHHHHHHHHHTTCCEEEEEEESS------------CC---------------CHHHH
T ss_pred ceEEEeeeechhhcchHHHHHHHHHHHHHHHHccCCCeeEEEecCC------------Cc---------------HHHHH
Confidence 56789999987762 33455555699999999 9999999998743 10 12334
Q ss_pred HHHHHHhhc---cceeEEEEEeehhhchHH-hhhhcCCCCcc--c--eEEeeeccccccceEEeccceeeecchhHHHHH
Q psy9448 92 HLFDELRLL---GDAEFTVRVSFLEIYNEE-LIDLLSPTDDI--T--KLRLFEDSARKGSVIIQGLEEKAVHNKDEVYKI 163 (583)
Q Consensus 92 ~lf~~~~~~---~~~~~~v~vS~~EIyne~-v~DLL~~~~~~--~--~l~i~~~~~~~~~~~v~~l~~~~v~s~~e~~~l 163 (583)
.|+..+... =.++|.+.+-|+.+.++. ..|||.+..+. . .+++.++. +.+ +=+.+.+.+..+.+.+
T Consensus 145 ~lL~fi~~k~~~Y~~~y~i~lQ~V~Lse~~~S~DlL~~~~~~~~~~I~lkiee~s-----I~l-dS~~i~i~~~~~~l~~ 218 (333)
T 4etp_B 145 SLIKFLAEKDTIYQKQYVITLQFVFLSDDEFSQDMLLDYSHNDKDSIKLKFEKHS-----ISL-DSKLVIIENGLEDLPL 218 (333)
T ss_dssp HHHHHHHSTTCHHHHHEEEEEEEEECCSSSCCEESSCC----------CEEETTE-----EEC-CSCCEEESSGGGGSCT
T ss_pred HHHHHHHhcccccccceEEEEEEEEEcCCCchhhhhccccccCCCCceEEeecce-----Eee-cceEEEeccccccchh
Confidence 455555543 135788999999888776 68999875221 1 33333322 222 2233444444332222
Q ss_pred HHhc-chhhhhHHHHhhhcccCceeEEEEEEEeecCCCChhhHhhccCceeeeccCCcccCccchhhhhhhhhcCcchhh
Q psy9448 164 LEKG-SQKRQTAATLMNAHSSRSHTIFTITIHIKDNSLDGEELLRTGKLNLVDLAGSENIGRSGAQDKRAREAGNINQSL 242 (583)
Q Consensus 164 l~~g-~~~R~~~~t~~n~~SSRSH~i~~i~i~~~~~~~~~~~~~~~s~L~~VDLAGsEr~~~~~~~~~~~~E~~~In~SL 242 (583)
+.+. ...+- ....-.|+.+.+.......++..-...-..+||.+-+.. .+
T Consensus 219 ~~kl~~~~~~---------~~~GI~IlKfqf~~~~~~~~~n~~~~~~~fYFiEi~~~~--------------------ti 269 (333)
T 4etp_B 219 NFSADEHPNL---------PHSGMGIIKVQFFPRDSKSDGNNDPVPVDFYFIELNNLK--------------------SI 269 (333)
T ss_dssp TSSCCC-----------------CEEEEEEEEECC--------CCCEEEEEEEECSHH--------------------HH
T ss_pred hhccccCCCC---------CCCCceEEEEEEEecCcccccccCCcceeEEEEEecChh--------------------HH
Confidence 2211 10110 112345777777765433222211113367888775432 23
Q ss_pred hhhhhHHHHHhhhCCCCCcchhhHhHHhhhhcCCcceeeEEEEeCccc
Q psy9448 243 LTLGRCITALVEKTPHIPYRESKLTRLLQDSLGGRTKTSIIATVSPAQ 290 (583)
Q Consensus 243 ~~L~~vi~aL~~~~~~ipyR~SkLT~lL~d~Lggn~~t~~I~~vsp~~ 290 (583)
..|.+++.. + -.-.|+++-+|+-.|. ..+.++|.++.-..
T Consensus 270 ~~l~~~i~~---~----~~~~spi~~ilkkLl~-~TKS~flfnl~~~~ 309 (333)
T 4etp_B 270 EQFDKSIFK---K----ESAETPIALVLKKLIS-DTKSFFLLNLNDSK 309 (333)
T ss_dssp HHHHSCC-----------CCCCHHHHHHHHHHH-HSBCEEEEEECCST
T ss_pred HHHHhhcCc---c----cccCCCHHHHHHHHHh-hCcceEEEEcCCcc
Confidence 334443322 1 1345778888886664 46889999997654
No 440
>3tr0_A Guanylate kinase, GMP kinase; purines, pyrimidines, nucleosides, nucleotides, transferase; HET: 5GP; 1.85A {Coxiella burnetii}
Probab=22.95 E-value=16 Score=33.11 Aligned_cols=16 Identities=25% Similarity=0.333 Sum_probs=11.9
Q ss_pred eEEEeeccCCCceEEe
Q psy9448 429 TVFAYGQTGTGKTFTM 444 (583)
Q Consensus 429 ~i~ayGqtgsGKT~Tm 444 (583)
.+.-.|++|||||..+
T Consensus 9 ii~l~Gp~GsGKSTl~ 24 (205)
T 3tr0_A 9 LFIISAPSGAGKTSLV 24 (205)
T ss_dssp EEEEECCTTSCHHHHH
T ss_pred EEEEECcCCCCHHHHH
Confidence 3455699999999653
No 441
>1gm5_A RECG; helicase, replication restart; HET: DNA ADP; 3.24A {Thermotoga maritima} SCOP: a.24.21.1 b.40.4.9 c.37.1.19 c.37.1.19
Probab=22.93 E-value=29 Score=39.31 Aligned_cols=39 Identities=18% Similarity=0.247 Sum_probs=25.9
Q ss_pred ccccccceeehhhhhhhHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 402 SQESKQVDVYKYVVNPLIDEVLSGYNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 402 ~~~~~q~~vy~~~~~~~v~~~l~G~n~~i~ayGqtgsGKT~Tm 444 (583)
.+..-|.+++..+ ...+-.+....++..|+||||||...
T Consensus 368 ~lt~~Q~~ai~~I----~~~l~~~~~~~~Ll~a~TGSGKTlva 406 (780)
T 1gm5_A 368 KLTNAQKRAHQEI----RNDMISEKPMNRLLQGDVGSGKTVVA 406 (780)
T ss_dssp CCCHHHHHHHHHH----HHHHHSSSCCCCEEECCSSSSHHHHH
T ss_pred CCCHHHHHHHHHH----HhhccccCCCcEEEEcCCCCCHHHHH
Confidence 4556676555443 33444555567889999999999654
No 442
>1ukz_A Uridylate kinase; transferase; HET: ADP AMP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1uky_A*
Probab=22.89 E-value=21 Score=32.37 Aligned_cols=17 Identities=29% Similarity=0.565 Sum_probs=13.8
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 49 CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm 65 (583)
-.|+-.|..|||||+..
T Consensus 16 ~~I~l~G~~GsGKsT~~ 32 (203)
T 1ukz_A 16 SVIFVLGGPGAGKGTQC 32 (203)
T ss_dssp EEEEEECSTTSSHHHHH
T ss_pred cEEEEECCCCCCHHHHH
Confidence 35788899999999754
No 443
>3fb4_A Adenylate kinase; psychrophIle, phosphotransferase, ATP-binding, nucleotide-binding, transferase; HET: AP5; 2.00A {Marinibacillus marinus}
Probab=22.88 E-value=21 Score=32.74 Aligned_cols=15 Identities=27% Similarity=0.443 Sum_probs=12.3
Q ss_pred EEEeeccCCCceEEe
Q psy9448 51 VFAYGQTGTGKTFTM 65 (583)
Q Consensus 51 i~ayGqtgSGKT~Tm 65 (583)
|+-.|..|||||+..
T Consensus 3 I~l~G~~GsGKsT~a 17 (216)
T 3fb4_A 3 IVLMGLPGAGKGTQA 17 (216)
T ss_dssp EEEECSTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 567899999998754
No 444
>3a4m_A L-seryl-tRNA(SEC) kinase; P-loop motif, walker A motif, ATP binding motif, ATP- binding, nucleotide-binding, transferase; HET: ADP; 1.79A {Methanocaldococcus jannaschii} PDB: 3a4l_A* 3a4n_A 3am1_A* 3add_A* 3adc_A* 3adb_A*
Probab=22.84 E-value=22 Score=34.03 Aligned_cols=17 Identities=24% Similarity=0.315 Sum_probs=14.1
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 49 CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm 65 (583)
..|+..|..|||||+..
T Consensus 5 ~lIvl~G~pGSGKSTla 21 (260)
T 3a4m_A 5 MLIILTGLPGVGKSTFS 21 (260)
T ss_dssp EEEEEECCTTSSHHHHH
T ss_pred EEEEEEcCCCCCHHHHH
Confidence 36888999999999754
No 445
>3crm_A TRNA delta(2)-isopentenylpyrophosphate transferase; ATP-binding, nucleotide-binding, nucleotidyltransferase, tRNA processing; 1.90A {Pseudomonas aeruginosa} PDB: 3crq_A 3crr_A
Probab=22.84 E-value=26 Score=35.20 Aligned_cols=16 Identities=38% Similarity=0.474 Sum_probs=13.3
Q ss_pred eeEEEeeccCCCceEE
Q psy9448 49 CTVFAYGQTGTGKTFT 64 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~T 64 (583)
-.|+-.|+||||||..
T Consensus 6 ~~i~i~GptGsGKTtl 21 (323)
T 3crm_A 6 PAIFLMGPTAAGKTDL 21 (323)
T ss_dssp EEEEEECCTTSCHHHH
T ss_pred cEEEEECCCCCCHHHH
Confidence 3678899999999863
No 446
>3m6a_A ATP-dependent protease LA 1; alpha, beta, ATP-binding, hydrolase, nucleotide-binding, Pro serine protease, stress response; HET: ADP; 3.40A {Bacillus subtilis} PDB: 1x37_A
Probab=22.79 E-value=17 Score=39.29 Aligned_cols=17 Identities=29% Similarity=0.286 Sum_probs=14.6
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 49 CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm 65 (583)
..++-+|++|+|||+.+
T Consensus 109 ~~vll~Gp~GtGKTtla 125 (543)
T 3m6a_A 109 PILCLAGPPGVGKTSLA 125 (543)
T ss_dssp CEEEEESSSSSSHHHHH
T ss_pred CEEEEECCCCCCHHHHH
Confidence 46889999999999765
No 447
>2ykg_A Probable ATP-dependent RNA helicase DDX58; hydrolase, innate immunity; 2.50A {Homo sapiens} PDB: 3tmi_A*
Probab=22.79 E-value=32 Score=37.88 Aligned_cols=24 Identities=38% Similarity=0.527 Sum_probs=18.0
Q ss_pred hHHHHhcccceeEEEeeccCCCceEE
Q psy9448 418 LIDEVLSGYNCTVFAYGQTGTGKTFT 443 (583)
Q Consensus 418 ~v~~~l~G~n~~i~ayGqtgsGKT~T 443 (583)
.+..+++|.| ++..++||||||..
T Consensus 21 ~i~~~l~g~~--~iv~~~TGsGKTl~ 44 (696)
T 2ykg_A 21 LALPAMKGKN--TIICAPTGCGKTFV 44 (696)
T ss_dssp HHHHHHTTCC--EEEECCTTSSHHHH
T ss_pred HHHHHHcCCC--EEEEcCCCchHHHH
Confidence 4455667766 57889999999964
No 448
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=22.73 E-value=35 Score=38.88 Aligned_cols=20 Identities=30% Similarity=0.416 Sum_probs=18.7
Q ss_pred cccceeEEEeeccCCCceEE
Q psy9448 45 SGYNCTVFAYGQTGTGKTFT 64 (583)
Q Consensus 45 ~G~n~~i~ayGqtgSGKT~T 64 (583)
++.|.||+.-|.+|||||.+
T Consensus 166 ~~~nQsIiiSGESGAGKTe~ 185 (837)
T 1kk8_A 166 DRENQSCLITGESGAGKTEN 185 (837)
T ss_dssp HTSEEEEEEECSTTSSHHHH
T ss_pred cCCCcEEEEeCCCCCCchhh
Confidence 69999999999999999965
No 449
>3iij_A Coilin-interacting nuclear ATPase protein; alpha and beta proteins (A/B), protein binding, transferase, phosphotransferase; HET: ADP; 1.76A {Homo sapiens} SCOP: c.37.1.1 PDB: 3iik_A 3iil_A* 3iim_A* 1rkb_A
Probab=22.72 E-value=21 Score=31.68 Aligned_cols=17 Identities=29% Similarity=0.354 Sum_probs=13.5
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 428 CTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 428 ~~i~ayGqtgsGKT~Tm 444 (583)
..|+-.|..|||||+..
T Consensus 12 ~~i~i~G~~GsGKst~~ 28 (180)
T 3iij_A 12 PNILLTGTPGVGKTTLG 28 (180)
T ss_dssp CCEEEECSTTSSHHHHH
T ss_pred CeEEEEeCCCCCHHHHH
Confidence 35788999999999543
No 450
>1c4o_A DNA nucleotide excision repair enzyme UVRB; uvrabc, helicase, hypertherm protein, replication; HET: DNA BOG; 1.50A {Thermus thermophilus} SCOP: c.37.1.19 c.37.1.19 PDB: 1d2m_A*
Probab=22.72 E-value=29 Score=38.48 Aligned_cols=46 Identities=33% Similarity=0.406 Sum_probs=29.6
Q ss_pred cccccccccccccceeehhhhhhhHHHHhcccceeEEEeeccCCCceEEeec
Q psy9448 395 FGFDRVFSQESKQVDVYKYVVNPLIDEVLSGYNCTVFAYGQTGTGKTFTMEG 446 (583)
Q Consensus 395 f~fD~vf~~~~~q~~vy~~~~~~~v~~~l~G~n~~i~ayGqtgsGKT~Tm~G 446 (583)
|.+.. |.|.-.|..-+.. +++.+-.|... ....|.||||||+||..
T Consensus 2 ~~~~~-~~~~~~q~~ai~~----l~~~~~~~~~~-~~l~g~tgs~kt~~~a~ 47 (664)
T 1c4o_A 2 FRYRG-PSPKGDQPKAIAG----LVEALRDGERF-VTLLGATGTGKTVTMAK 47 (664)
T ss_dssp CCCCS-CCCCTTHHHHHHH----HHHHHHTTCSE-EEEEECTTSCHHHHHHH
T ss_pred CCCCC-CCCCCCChHHHHH----HHHHHhcCCCc-EEEEcCCCcHHHHHHHH
Confidence 44443 3777777655443 45555556432 34679999999999964
No 451
>3sop_A Neuronal-specific septin-3; hydrolase; HET: GDP; 2.88A {Homo sapiens}
Probab=22.69 E-value=18 Score=35.11 Aligned_cols=18 Identities=28% Similarity=0.577 Sum_probs=14.2
Q ss_pred ceeEEEeeccCCCceEEe
Q psy9448 427 NCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 427 n~~i~ayGqtgsGKT~Tm 444 (583)
+-++...|++|+|||..|
T Consensus 2 ~f~v~lvG~nGaGKSTLl 19 (270)
T 3sop_A 2 DFNIMVVGQSGLGKSTLV 19 (270)
T ss_dssp EEEEEEEESSSSSHHHHH
T ss_pred eeEEEEECCCCCCHHHHH
Confidence 456778899999999544
No 452
>2yhs_A FTSY, cell division protein FTSY; cell cycle, protein targeting, simibi class GTPase, GTP-BIND membrane, nucleotide-binding; 1.60A {Escherichia coli} PDB: 2qy9_A 2xxa_B* 1fts_A
Probab=22.67 E-value=17 Score=38.83 Aligned_cols=17 Identities=35% Similarity=0.585 Sum_probs=14.6
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 49 CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm 65 (583)
..|...|++|||||.++
T Consensus 294 eVI~LVGpNGSGKTTLl 310 (503)
T 2yhs_A 294 FVILMVGVNGVGKTTTI 310 (503)
T ss_dssp EEEEEECCTTSSHHHHH
T ss_pred eEEEEECCCcccHHHHH
Confidence 36778899999999888
No 453
>1aky_A Adenylate kinase; ATP:AMP phosphotransferase, myokinase, transferase (phosphotransferase); HET: AP5; 1.63A {Saccharomyces cerevisiae} SCOP: c.37.1.1 g.41.2.1 PDB: 2aky_A* 3aky_A* 1dvr_A*
Probab=22.59 E-value=21 Score=32.92 Aligned_cols=16 Identities=25% Similarity=0.399 Sum_probs=13.2
Q ss_pred eEEEeeccCCCceEEe
Q psy9448 50 TVFAYGQTGTGKTFTM 65 (583)
Q Consensus 50 ~i~ayGqtgSGKT~Tm 65 (583)
.|+..|..|||||+..
T Consensus 6 ~I~l~G~~GsGKsT~a 21 (220)
T 1aky_A 6 RMVLIGPPGAGKGTQA 21 (220)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 5788999999998643
No 454
>3tbk_A RIG-I helicase domain; DECH helicase, ATP binding, hydrolase; HET: ANP; 2.14A {Mus musculus}
Probab=22.56 E-value=33 Score=36.18 Aligned_cols=24 Identities=38% Similarity=0.459 Sum_probs=18.1
Q ss_pred hHHHHhcccceeEEEeeccCCCceEE
Q psy9448 418 LIDEVLSGYNCTVFAYGQTGTGKTFT 443 (583)
Q Consensus 418 ~v~~~l~G~n~~i~ayGqtgsGKT~T 443 (583)
.+..+++|.+ ++..++||||||.+
T Consensus 12 ~i~~~~~~~~--~l~~~~tGsGKT~~ 35 (555)
T 3tbk_A 12 LALPAKKGKN--TIICAPTGCGKTFV 35 (555)
T ss_dssp HHHHHHTTCC--EEEECCTTSCHHHH
T ss_pred HHHHHhCCCC--EEEEeCCCChHHHH
Confidence 4455667765 57789999999976
No 455
>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A*
Probab=22.54 E-value=37 Score=38.39 Aligned_cols=21 Identities=29% Similarity=0.499 Sum_probs=19.1
Q ss_pred cccceeEEEeeccCCCceEEe
Q psy9448 45 SGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 45 ~G~n~~i~ayGqtgSGKT~Tm 65 (583)
++.|.||+.-|.+|||||.+.
T Consensus 168 ~~~nQsIiiSGESGAGKTe~t 188 (783)
T 4db1_A 168 DRENQSILITGESGAGKTVNT 188 (783)
T ss_dssp HTCCEEEEEECSTTSSHHHHH
T ss_pred hCCCceEEEeCCCCCCCchHH
Confidence 799999999999999999653
No 456
>1r6b_X CLPA protein; AAA+, N-terminal domain, CLPS, crystal, binding mechanism, hydrolase; HET: ADP; 2.25A {Escherichia coli} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 PDB: 1ksf_X*
Probab=22.48 E-value=32 Score=38.59 Aligned_cols=32 Identities=25% Similarity=0.351 Sum_probs=22.8
Q ss_pred hhhhHHHHhcccceeEEEeeccCCCceEEeec
Q psy9448 415 VNPLIDEVLSGYNCTVFAYGQTGTGKTFTMEG 446 (583)
Q Consensus 415 ~~~~v~~~l~G~n~~i~ayGqtgsGKT~Tm~G 446 (583)
+..+++.+.......++-||++|+|||+.+.+
T Consensus 195 i~~l~~~l~~~~~~~vlL~G~~GtGKT~la~~ 226 (758)
T 1r6b_X 195 LERAIQVLCRRRKNNPLLVGESGVGKTAIAEG 226 (758)
T ss_dssp HHHHHHHHTSSSSCEEEEECCTTSSHHHHHHH
T ss_pred HHHHHHHHhccCCCCeEEEcCCCCCHHHHHHH
Confidence 34455555555566788999999999987654
No 457
>2xgj_A ATP-dependent RNA helicase DOB1; hydrolase-RNA complex, hydrolase, tramp, exosome, DEAD, nucleotide-binding; HET: ADP; 2.90A {Saccharomyces cerevisiae}
Probab=22.37 E-value=31 Score=40.28 Aligned_cols=24 Identities=29% Similarity=0.351 Sum_probs=18.6
Q ss_pred hHHHHhcccceeEEEeeccCCCceEE
Q psy9448 39 LIDEVLSGYNCTVFAYGQTGTGKTFT 64 (583)
Q Consensus 39 lv~~~l~G~n~~i~ayGqtgSGKT~T 64 (583)
.+..+++|.+ ++..++||||||..
T Consensus 94 ai~~l~~g~~--vLV~apTGSGKTlv 117 (1010)
T 2xgj_A 94 AISCIDRGES--VLVSAHTSAGKTVV 117 (1010)
T ss_dssp HHHHHHHTCE--EEEECCTTSCHHHH
T ss_pred HHHHHHcCCC--EEEECCCCCChHHH
Confidence 4556667766 67889999999975
No 458
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=22.26 E-value=17 Score=32.75 Aligned_cols=16 Identities=31% Similarity=0.252 Sum_probs=12.7
Q ss_pred eEEEeeccCCCceEEe
Q psy9448 50 TVFAYGQTGTGKTFTM 65 (583)
Q Consensus 50 ~i~ayGqtgSGKT~Tm 65 (583)
.|.-.|.+|||||..+
T Consensus 6 ~i~i~G~sGsGKTTl~ 21 (169)
T 1xjc_A 6 VWQVVGYKHSGKTTLM 21 (169)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4566799999998766
No 459
>1rz3_A Hypothetical protein rbstp0775; MCSG, structural genomics, PSI, protein structure initiative; 1.90A {Geobacillus stearothermophilus} SCOP: c.37.1.6
Probab=22.21 E-value=46 Score=30.25 Aligned_cols=29 Identities=21% Similarity=0.155 Sum_probs=18.5
Q ss_pred hhhHHHHhc---ccceeEEEeeccCCCceEEe
Q psy9448 416 NPLIDEVLS---GYNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 416 ~~~v~~~l~---G~n~~i~ayGqtgsGKT~Tm 444 (583)
..+++.+.. .-...|.-.|.+|||||..+
T Consensus 8 ~~l~~~~~~~~~~~~~~i~i~G~~GsGKstl~ 39 (201)
T 1rz3_A 8 DFLCKTILAIKTAGRLVLGIDGLSRSGKTTLA 39 (201)
T ss_dssp HHHHHHHHTSCCSSSEEEEEEECTTSSHHHHH
T ss_pred HHHHHHHHHhccCCCeEEEEECCCCCCHHHHH
Confidence 344444443 23346777899999999653
No 460
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=21.99 E-value=38 Score=38.35 Aligned_cols=20 Identities=30% Similarity=0.567 Sum_probs=18.6
Q ss_pred cccceeEEEeeccCCCceEE
Q psy9448 45 SGYNCTVFAYGQTGTGKTFT 64 (583)
Q Consensus 45 ~G~n~~i~ayGqtgSGKT~T 64 (583)
++.|.||+.-|.+|||||.+
T Consensus 153 ~~~nQsIiisGESGAGKTe~ 172 (795)
T 1w7j_A 153 DERNQSIIVSGESGAGKTVS 172 (795)
T ss_dssp HTCCEEEEEECSTTSSHHHH
T ss_pred cCCCeEEEEeCCCCCCcchH
Confidence 69999999999999999965
No 461
>3l9o_A ATP-dependent RNA helicase DOB1; REC-A fold, winged-helix-turn-helix, antiparallel-coiled-COI domain, ATP-binding, helicase, hydrolase; 3.39A {Saccharomyces cerevisiae}
Probab=21.98 E-value=29 Score=40.92 Aligned_cols=25 Identities=28% Similarity=0.339 Sum_probs=19.0
Q ss_pred hhHHHHhcccceeEEEeeccCCCceEE
Q psy9448 38 PLIDEVLSGYNCTVFAYGQTGTGKTFT 64 (583)
Q Consensus 38 plv~~~l~G~n~~i~ayGqtgSGKT~T 64 (583)
..+..+++|.+ ++..|+||||||..
T Consensus 191 ~AI~~i~~g~d--vLV~ApTGSGKTlv 215 (1108)
T 3l9o_A 191 TAISCIDRGES--VLVSAHTSAGKTVV 215 (1108)
T ss_dssp HHHHHHTTTCC--EEEECCSSSHHHHH
T ss_pred HHHHHHHcCCC--EEEECCCCCChHHH
Confidence 35666677765 57889999999964
No 462
>2gno_A DNA polymerase III, gamma subunit-related protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: DNA; 2.00A {Thermotoga maritima} SCOP: a.80.1.1 c.37.1.20
Probab=21.93 E-value=37 Score=33.54 Aligned_cols=31 Identities=6% Similarity=-0.026 Sum_probs=21.8
Q ss_pred hhhhhHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 35 VVNPLIDEVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 35 ~~~plv~~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
+++.+...+-.|..-.++-||+.|+|||.+.
T Consensus 5 ~~~~L~~~i~~~~~~~~Lf~Gp~G~GKtt~a 35 (305)
T 2gno_A 5 QLETLKRIIEKSEGISILINGEDLSYPREVS 35 (305)
T ss_dssp HHHHHHHHHHTCSSEEEEEECSSSSHHHHHH
T ss_pred HHHHHHHHHHCCCCcEEEEECCCCCCHHHHH
Confidence 3444544555676557888999999998765
No 463
>4gl2_A Interferon-induced helicase C domain-containing P; MDA5, dsRNA, anti-viral signaling, RIG-I, MAVS, oligomerizat helicase, ATPase; HET: ANP; 3.56A {Homo sapiens}
Probab=21.91 E-value=33 Score=37.83 Aligned_cols=26 Identities=31% Similarity=0.351 Sum_probs=19.5
Q ss_pred hHHHHhcccceeEEEeeccCCCceEEee
Q psy9448 418 LIDEVLSGYNCTVFAYGQTGTGKTFTME 445 (583)
Q Consensus 418 ~v~~~l~G~n~~i~ayGqtgsGKT~Tm~ 445 (583)
.+..+++|.+ ++..++||+|||.+..
T Consensus 15 ~i~~il~g~~--~ll~~~TGsGKTl~~~ 40 (699)
T 4gl2_A 15 VAQPALEGKN--IIICLPTGCGKTRVAV 40 (699)
T ss_dssp HHHHHHSSCC--EEECCCTTSCHHHHHH
T ss_pred HHHHHHhCCC--EEEEcCCCCcHHHHHH
Confidence 4555667765 6888999999997643
No 464
>3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii}
Probab=21.88 E-value=28 Score=30.90 Aligned_cols=14 Identities=36% Similarity=0.665 Sum_probs=12.0
Q ss_pred eEEEeeccCCCceE
Q psy9448 429 TVFAYGQTGTGKTF 442 (583)
Q Consensus 429 ~i~ayGqtgsGKT~ 442 (583)
.|+-.|.+|||||.
T Consensus 7 ~i~l~G~~GsGKst 20 (185)
T 3trf_A 7 NIYLIGLMGAGKTS 20 (185)
T ss_dssp EEEEECSTTSSHHH
T ss_pred EEEEECCCCCCHHH
Confidence 57788999999994
No 465
>1w4r_A Thymidine kinase; type II, human, cytosolic, phosphorylation, transferase; HET: TTP; 1.83A {Homo sapiens} PDB: 1xbt_A* 2wvj_A* 2j87_A*
Probab=21.88 E-value=32 Score=31.78 Aligned_cols=23 Identities=13% Similarity=0.049 Sum_probs=13.7
Q ss_pred HHHHhcccceeEEEeeccCCCce
Q psy9448 40 IDEVLSGYNCTVFAYGQTGTGKT 62 (583)
Q Consensus 40 v~~~l~G~n~~i~ayGqtgSGKT 62 (583)
|......-.-..|-||+.|||||
T Consensus 12 ~~~~~~~~g~l~fiyG~MgsGKT 34 (195)
T 1w4r_A 12 VPRGSKTRGQIQVILGPMFSGKS 34 (195)
T ss_dssp -------CCEEEEEEECTTSCHH
T ss_pred cccCCCCceEEEEEECCCCCcHH
Confidence 33333334457899999999999
No 466
>1yks_A Genome polyprotein [contains: flavivirin protease NS3 catalytic subunit]; helicase, flavivirus, DEAD-BOX, ATPase, rtpase, hydrolase; 1.80A {Yellow fever virus} SCOP: c.37.1.14 c.37.1.14 PDB: 1ymf_A*
Probab=21.85 E-value=26 Score=36.54 Aligned_cols=21 Identities=24% Similarity=0.265 Sum_probs=15.7
Q ss_pred HhcccceeEEEeeccCCCceEEe
Q psy9448 43 VLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 43 ~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
+++|.| ++..|+||||||...
T Consensus 5 l~~g~~--vlv~a~TGSGKT~~~ 25 (440)
T 1yks_A 5 LKKGMT--TVLDFHPGAGKTRRF 25 (440)
T ss_dssp TSTTCE--EEECCCTTSSTTTTH
T ss_pred hhCCCC--EEEEcCCCCCHHHHH
Confidence 345655 567899999999874
No 467
>1qhx_A CPT, protein (chloramphenicol phosphotransferase); kinase, antibiotic resistance, phosphorylation, mononucleoti binding fold; HET: ATP; 2.50A {Streptomyces venezuelae} SCOP: c.37.1.3 PDB: 1grr_A* 1grq_A 1qhs_A* 1qhn_A* 1qhy_A*
Probab=21.82 E-value=28 Score=30.60 Aligned_cols=16 Identities=19% Similarity=0.258 Sum_probs=13.0
Q ss_pred eeEEEeeccCCCceEE
Q psy9448 428 CTVFAYGQTGTGKTFT 443 (583)
Q Consensus 428 ~~i~ayGqtgsGKT~T 443 (583)
..|+-.|..|||||..
T Consensus 4 ~~i~l~G~~GsGKST~ 19 (178)
T 1qhx_A 4 RMIILNGGSSAGKSGI 19 (178)
T ss_dssp CEEEEECCTTSSHHHH
T ss_pred eEEEEECCCCCCHHHH
Confidence 3578899999999943
No 468
>2bbw_A Adenylate kinase 4, AK4; nucleotide kinase, nucleotide binding, human, structura genomics, structural genomics consortium, SGC, transferase; HET: GP5; 2.05A {Homo sapiens} PDB: 2ar7_A* 3ndp_A
Probab=21.81 E-value=24 Score=33.28 Aligned_cols=17 Identities=24% Similarity=0.352 Sum_probs=14.5
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 49 CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm 65 (583)
..|.-.|+.|||||+.+
T Consensus 28 ~~i~l~G~~GsGKSTl~ 44 (246)
T 2bbw_A 28 LRAVILGPPGSGKGTVC 44 (246)
T ss_dssp CEEEEECCTTSSHHHHH
T ss_pred cEEEEECCCCCCHHHHH
Confidence 46788899999999866
No 469
>3lfu_A DNA helicase II; SF1 helicase, ATP-binding, DNA damage, DNA REP replication, DNA-binding, hydrolase, nucleotide-B SOS response; HET: DNA; 1.80A {Escherichia coli} PDB: 2is6_A* 2is2_A* 2is1_A* 2is4_A*
Probab=21.80 E-value=21 Score=38.96 Aligned_cols=20 Identities=20% Similarity=0.361 Sum_probs=16.7
Q ss_pred ceeEEEeeccCCCceEEeec
Q psy9448 427 NCTVFAYGQTGTGKTFTMEG 446 (583)
Q Consensus 427 n~~i~ayGqtgsGKT~Tm~G 446 (583)
+..++..|..|||||.|+.-
T Consensus 22 ~~~~lV~a~aGsGKT~~l~~ 41 (647)
T 3lfu_A 22 RSNLLVLAGAGSGKTRVLVH 41 (647)
T ss_dssp SSCEEEEECTTSCHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHH
Confidence 55678899999999999854
No 470
>3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A
Probab=21.80 E-value=26 Score=35.09 Aligned_cols=16 Identities=44% Similarity=0.364 Sum_probs=12.7
Q ss_pred eEEEeeccCCCceEEe
Q psy9448 50 TVFAYGQTGTGKTFTM 65 (583)
Q Consensus 50 ~i~ayGqtgSGKT~Tm 65 (583)
.|+..|+||||||...
T Consensus 5 ~i~i~GptgsGKt~la 20 (322)
T 3exa_A 5 LVAIVGPTAVGKTKTS 20 (322)
T ss_dssp EEEEECCTTSCHHHHH
T ss_pred EEEEECCCcCCHHHHH
Confidence 4677899999998543
No 471
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix}
Probab=21.74 E-value=26 Score=31.28 Aligned_cols=17 Identities=35% Similarity=0.487 Sum_probs=13.8
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 49 CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm 65 (583)
..|+-.|..|||||+..
T Consensus 14 ~~i~l~G~~GsGKsT~~ 30 (186)
T 2yvu_A 14 IVVWLTGLPGSGKTTIA 30 (186)
T ss_dssp EEEEEECCTTSSHHHHH
T ss_pred cEEEEEcCCCCCHHHHH
Confidence 45778899999998754
No 472
>3dl0_A Adenylate kinase; phosphotransferase, zinc coordination, ATP-binding, binding, nucleotide biosynthesis, nucleotide-binding, trans; HET: AP5; 1.58A {Bacillus subtilis} PDB: 1p3j_A* 2ori_A* 2eu8_A* 2oo7_A* 2p3s_A* 2qaj_A* 2osb_A* 3dkv_A* 1zin_A* 1zio_A* 1zip_A* 1s3g_A*
Probab=21.66 E-value=23 Score=32.51 Aligned_cols=15 Identities=27% Similarity=0.352 Sum_probs=12.3
Q ss_pred EEEeeccCCCceEEe
Q psy9448 51 VFAYGQTGTGKTFTM 65 (583)
Q Consensus 51 i~ayGqtgSGKT~Tm 65 (583)
|+-.|+.|||||+..
T Consensus 3 I~l~G~~GsGKsT~a 17 (216)
T 3dl0_A 3 LVLMGLPGAGKGTQG 17 (216)
T ss_dssp EEEECSTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 566899999998754
No 473
>4a2w_A RIG-I, retinoic acid inducible protein I; hydrolase, superfamily 2 RNA helicase, ATP and dsRNA binding antiviral signalling pathway; 3.70A {Anas platyrhynchos}
Probab=21.64 E-value=35 Score=39.40 Aligned_cols=27 Identities=33% Similarity=0.521 Sum_probs=20.4
Q ss_pred hhHHHHhcccceeEEEeeccCCCceEEee
Q psy9448 38 PLIDEVLSGYNCTVFAYGQTGTGKTFTME 66 (583)
Q Consensus 38 plv~~~l~G~n~~i~ayGqtgSGKT~Tm~ 66 (583)
..+..+++|.| ++..++||||||.+..
T Consensus 255 ~ai~~il~g~~--~ll~a~TGsGKTl~~~ 281 (936)
T 4a2w_A 255 ELAQPAINGKN--ALICAPTGSGKTFVSI 281 (936)
T ss_dssp HHHHHHHTTCC--EEEECCTTSCHHHHHH
T ss_pred HHHHHHHcCCC--EEEEeCCCchHHHHHH
Confidence 35667778877 4667899999998743
No 474
>2z83_A Helicase/nucleoside triphosphatase; hydrolase, membrane, nucleotide-binding, RNA replication, transmembrane, viral protein; 1.80A {Japanese encephalitis virus} PDB: 2v8o_A 2qeq_A
Probab=21.63 E-value=29 Score=36.43 Aligned_cols=15 Identities=27% Similarity=0.217 Sum_probs=12.7
Q ss_pred eEEEeeccCCCceEE
Q psy9448 50 TVFAYGQTGTGKTFT 64 (583)
Q Consensus 50 ~i~ayGqtgSGKT~T 64 (583)
.++..++||||||..
T Consensus 23 ~vlv~a~TGsGKT~~ 37 (459)
T 2z83_A 23 MTVLDLHPGSGKTRK 37 (459)
T ss_dssp EEEECCCTTSCTTTT
T ss_pred cEEEECCCCCCHHHH
Confidence 457789999999987
No 475
>1rj9_A FTSY, signal recognition protein; SRP-GTPase domain, heterodimer, nucleotide twinning, protein complex, protein transport; HET: GCP; 1.90A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 2q9c_A* 2q9b_A* 2q9a_A* 1okk_D* 2xkv_D 2iyl_D* 2cnw_D* 2j7p_D*
Probab=21.63 E-value=20 Score=35.60 Aligned_cols=17 Identities=41% Similarity=0.579 Sum_probs=13.0
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 428 CTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 428 ~~i~ayGqtgsGKT~Tm 444 (583)
-.+.-.|++|||||.++
T Consensus 103 ~vi~lvG~nGsGKTTll 119 (304)
T 1rj9_A 103 RVVLVVGVNGVGKTTTI 119 (304)
T ss_dssp SEEEEECSTTSSHHHHH
T ss_pred eEEEEECCCCCcHHHHH
Confidence 34555699999999665
No 476
>2p6r_A Afuhel308 helicase; protein-DNA complex, SF2 helicase, archaeal helicase, DNA repair,, DNA binding protein/DNA complex; 3.00A {Archaeoglobus fulgidus} SCOP: a.4.5.43 a.289.1.2 c.37.1.19 c.37.1.19 PDB: 2p6u_A
Probab=21.63 E-value=22 Score=39.51 Aligned_cols=25 Identities=32% Similarity=0.458 Sum_probs=18.0
Q ss_pred hHHHHhcccceeEEEeeccCCCceEEe
Q psy9448 39 LIDEVLSGYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 39 lv~~~l~G~n~~i~ayGqtgSGKT~Tm 65 (583)
+++.+++|.| ++..|+||||||...
T Consensus 33 ~i~~i~~~~~--~lv~apTGsGKT~~~ 57 (702)
T 2p6r_A 33 AVEKVFSGKN--LLLAMPTAAGKTLLA 57 (702)
T ss_dssp HHHHHTTCSC--EEEECSSHHHHHHHH
T ss_pred HHHHHhCCCc--EEEEcCCccHHHHHH
Confidence 4455566655 577899999999764
No 477
>2orw_A Thymidine kinase; TMTK, TP4A, transferase; HET: 4TA; 1.50A {Thermotoga maritima} PDB: 2qpo_A 2qq0_A* 2qqe_A*
Probab=21.57 E-value=15 Score=33.38 Aligned_cols=18 Identities=22% Similarity=0.183 Sum_probs=14.8
Q ss_pred eEEEeeccCCCceEEeec
Q psy9448 429 TVFAYGQTGTGKTFTMEG 446 (583)
Q Consensus 429 ~i~ayGqtgsGKT~Tm~G 446 (583)
.++-||+.|+|||..+.+
T Consensus 5 i~vi~G~~gsGKTT~ll~ 22 (184)
T 2orw_A 5 LTVITGPMYSGKTTELLS 22 (184)
T ss_dssp EEEEEESTTSSHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHH
Confidence 467799999999988754
No 478
>1ly1_A Polynucleotide kinase; PNK, phosphatase, transferase; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1
Probab=21.54 E-value=27 Score=30.62 Aligned_cols=15 Identities=27% Similarity=0.499 Sum_probs=12.5
Q ss_pred eEEEeeccCCCceEE
Q psy9448 429 TVFAYGQTGTGKTFT 443 (583)
Q Consensus 429 ~i~ayGqtgsGKT~T 443 (583)
.|+-.|..|||||..
T Consensus 4 ~I~i~G~~GsGKST~ 18 (181)
T 1ly1_A 4 IILTIGCPGSGKSTW 18 (181)
T ss_dssp EEEEECCTTSSHHHH
T ss_pred EEEEecCCCCCHHHH
Confidence 577889999999943
No 479
>1g41_A Heat shock protein HSLU; AAA-ATPase, CLPY, ATP-dependent proteolysis, chaperone; HET: ADP; 2.30A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1g3i_A* 1im2_A* 1kyi_A* 1g4a_E* 1g4b_E 1yyf_A* 1do0_A* 1do2_A* 1e94_E* 1hqy_E* 1ht1_E* 1ht2_E*
Probab=21.53 E-value=23 Score=37.23 Aligned_cols=17 Identities=35% Similarity=0.472 Sum_probs=14.3
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 49 CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm 65 (583)
..|+-||++|+|||+..
T Consensus 51 ~~iLl~GppGtGKT~la 67 (444)
T 1g41_A 51 KNILMIGPTGVGKTEIA 67 (444)
T ss_dssp CCEEEECCTTSSHHHHH
T ss_pred ceEEEEcCCCCCHHHHH
Confidence 45899999999999754
No 480
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=21.53 E-value=40 Score=39.33 Aligned_cols=20 Identities=30% Similarity=0.463 Sum_probs=18.7
Q ss_pred cccceeEEEeeccCCCceEE
Q psy9448 45 SGYNCTVFAYGQTGTGKTFT 64 (583)
Q Consensus 45 ~G~n~~i~ayGqtgSGKT~T 64 (583)
++.|.||+.-|.+|||||.+
T Consensus 169 ~~~~QsIiisGESGAGKTe~ 188 (1010)
T 1g8x_A 169 DRQNQSLLITGESGAGKTEN 188 (1010)
T ss_dssp HTCCEEEEEEESTTSSHHHH
T ss_pred cCCCeEEEEeCCCCCCcchH
Confidence 69999999999999999965
No 481
>4ddu_A Reverse gyrase; topoisomerase, DNA supercoiling, archaea, helicase, hydrolas; 3.00A {Thermotoga maritima} PDB: 4ddt_A 4ddv_A 4ddw_A 4ddx_A
Probab=21.27 E-value=33 Score=40.47 Aligned_cols=24 Identities=25% Similarity=0.324 Sum_probs=19.1
Q ss_pred hhHHHHhcccceeEEEeeccCCCceE
Q psy9448 38 PLIDEVLSGYNCTVFAYGQTGTGKTF 63 (583)
Q Consensus 38 plv~~~l~G~n~~i~ayGqtgSGKT~ 63 (583)
..+..+++|.| +++.++||||||.
T Consensus 85 ~ai~~il~g~d--vlv~ApTGSGKTl 108 (1104)
T 4ddu_A 85 LWAKRIVQGKS--FTMVAPTGVGKTT 108 (1104)
T ss_dssp HHHHHHTTTCC--EEECCSTTCCHHH
T ss_pred HHHHHHHcCCC--EEEEeCCCCcHHH
Confidence 35667778876 5788999999998
No 482
>2pcj_A ABC transporter, lipoprotein-releasing system ATP-binding protein; structural genomics; 1.70A {Aquifex aeolicus} PDB: 2pcl_A
Probab=21.19 E-value=19 Score=33.79 Aligned_cols=15 Identities=33% Similarity=0.572 Sum_probs=12.2
Q ss_pred EEEeeccCCCceEEe
Q psy9448 51 VFAYGQTGTGKTFTM 65 (583)
Q Consensus 51 i~ayGqtgSGKT~Tm 65 (583)
+.-.|++|||||..+
T Consensus 33 ~~iiG~nGsGKSTLl 47 (224)
T 2pcj_A 33 VSIIGASGSGKSTLL 47 (224)
T ss_dssp EEEEECTTSCHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 456699999999766
No 483
>1zak_A Adenylate kinase; ATP:AMP-phosphotransferase, transferase; HET: AP5; 3.50A {Zea mays} SCOP: c.37.1.1 g.41.2.1
Probab=21.16 E-value=25 Score=32.54 Aligned_cols=16 Identities=25% Similarity=0.345 Sum_probs=13.2
Q ss_pred eEEEeeccCCCceEEe
Q psy9448 50 TVFAYGQTGTGKTFTM 65 (583)
Q Consensus 50 ~i~ayGqtgSGKT~Tm 65 (583)
.|+-.|..|||||+..
T Consensus 7 ~I~l~G~~GsGKsT~~ 22 (222)
T 1zak_A 7 KVMISGAPASGKGTQC 22 (222)
T ss_dssp CEEEEESTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4778899999998754
No 484
>2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis; HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB: 2ze5_A* 2ze7_A* 2ze8_A
Probab=21.16 E-value=27 Score=33.32 Aligned_cols=14 Identities=43% Similarity=0.522 Sum_probs=11.7
Q ss_pred eEEEeeccCCCceE
Q psy9448 429 TVFAYGQTGTGKTF 442 (583)
Q Consensus 429 ~i~ayGqtgsGKT~ 442 (583)
.|+-.|++|||||.
T Consensus 3 li~I~G~~GSGKST 16 (253)
T 2ze6_A 3 LHLIYGPTCSGKTD 16 (253)
T ss_dssp EEEEECCTTSSHHH
T ss_pred EEEEECCCCcCHHH
Confidence 36778999999984
No 485
>2if2_A Dephospho-COA kinase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 3.00A {Aquifex aeolicus}
Probab=21.12 E-value=25 Score=31.89 Aligned_cols=16 Identities=25% Similarity=0.331 Sum_probs=12.8
Q ss_pred eEEEeeccCCCceEEe
Q psy9448 50 TVFAYGQTGTGKTFTM 65 (583)
Q Consensus 50 ~i~ayGqtgSGKT~Tm 65 (583)
.|.-.|..|||||+..
T Consensus 3 ~i~i~G~~GsGKSTl~ 18 (204)
T 2if2_A 3 RIGLTGNIGCGKSTVA 18 (204)
T ss_dssp EEEEEECTTSSHHHHH
T ss_pred EEEEECCCCcCHHHHH
Confidence 3677899999998654
No 486
>2vhj_A Ntpase P4, P4; non- hydrolysable ATP analogue, hydrolase, virus dsRNA, molecular motor, packaging ATPase, hexameric helicase; HET: ADP; 1.80A {Pseudomonas phage PHI12} PDB: 2vhq_A* 1w44_A* 1w46_A* 1w47_A* 1w48_A* 1w49_A* 1w4a_A* 1w4b_A* 1w4c_A 2vht_A* 2vhu_A* 2vhc_A*
Probab=21.09 E-value=27 Score=35.08 Aligned_cols=18 Identities=28% Similarity=0.337 Sum_probs=14.3
Q ss_pred eeEEEeeccCCCceEEee
Q psy9448 49 CTVFAYGQTGTGKTFTME 66 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm~ 66 (583)
..++-||++|+|||+...
T Consensus 124 sviLI~GpPGsGKTtLAl 141 (331)
T 2vhj_A 124 GMVIVTGKGNSGKTPLVH 141 (331)
T ss_dssp EEEEEECSCSSSHHHHHH
T ss_pred cEEEEEcCCCCCHHHHHH
Confidence 346789999999997663
No 487
>2w0m_A SSO2452; RECA, SSPF, unknown FUN; 2.0A {Sulfolobus solfataricus P2}
Probab=21.01 E-value=42 Score=30.67 Aligned_cols=28 Identities=29% Similarity=0.386 Sum_probs=18.5
Q ss_pred hhHHHHhc-ccc--eeEEEeeccCCCceEEe
Q psy9448 417 PLIDEVLS-GYN--CTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 417 ~~v~~~l~-G~n--~~i~ayGqtgsGKT~Tm 444 (583)
+.++.++. |.. ..+.-+|++|+|||..+
T Consensus 10 ~~Ld~~~~ggi~~G~~~~i~G~~GsGKTtl~ 40 (235)
T 2w0m_A 10 LDFDKLIQGGIPQGFFIALTGEPGTGKTIFS 40 (235)
T ss_dssp HHHHGGGTTSEETTCEEEEECSTTSSHHHHH
T ss_pred hHHHHHhcCCCcCCCEEEEEcCCCCCHHHHH
Confidence 44555554 432 34666899999999654
No 488
>2cdn_A Adenylate kinase; phosphoryl transfer, associative mechanism, ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase; HET: ADP; 1.9A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1p4s_A
Probab=21.01 E-value=29 Score=31.40 Aligned_cols=20 Identities=30% Similarity=0.476 Sum_probs=15.3
Q ss_pred ccceeEEEeeccCCCceEEe
Q psy9448 46 GYNCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 46 G~n~~i~ayGqtgSGKT~Tm 65 (583)
.....|+-.|..|||||+..
T Consensus 18 ~~~~~I~l~G~~GsGKST~a 37 (201)
T 2cdn_A 18 GSHMRVLLLGPPGAGKGTQA 37 (201)
T ss_dssp CSCCEEEEECCTTSSHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHH
Confidence 33446888999999998753
No 489
>1sxj_A Activator 1 95 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=20.89 E-value=42 Score=35.79 Aligned_cols=17 Identities=35% Similarity=0.573 Sum_probs=14.8
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 428 CTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 428 ~~i~ayGqtgsGKT~Tm 444 (583)
-.++-||++|+|||++.
T Consensus 78 ~~lLL~GppGtGKTtla 94 (516)
T 1sxj_A 78 RAAMLYGPPGIGKTTAA 94 (516)
T ss_dssp SEEEEECSTTSSHHHHH
T ss_pred cEEEEECCCCCCHHHHH
Confidence 57899999999999765
No 490
>1lvg_A Guanylate kinase, GMP kinase; transferase; HET: ADP 5GP; 2.10A {Mus musculus} SCOP: c.37.1.1
Probab=20.87 E-value=18 Score=33.15 Aligned_cols=16 Identities=31% Similarity=0.546 Sum_probs=12.4
Q ss_pred eEEEeeccCCCceEEe
Q psy9448 429 TVFAYGQTGTGKTFTM 444 (583)
Q Consensus 429 ~i~ayGqtgsGKT~Tm 444 (583)
.+.-.|++|||||..+
T Consensus 6 ~i~lvGpsGaGKSTLl 21 (198)
T 1lvg_A 6 PVVLSGPSGAGKSTLL 21 (198)
T ss_dssp CEEEECCTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 3556799999999654
No 491
>1ak2_A Adenylate kinase isoenzyme-2; nucleoside monophosphate kinase, phosphotransferase; 1.92A {Bos taurus} SCOP: c.37.1.1 g.41.2.1 PDB: 2ak2_A 2c9y_A*
Probab=20.81 E-value=25 Score=32.96 Aligned_cols=18 Identities=22% Similarity=0.348 Sum_probs=14.4
Q ss_pred ceeEEEeeccCCCceEEe
Q psy9448 48 NCTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 48 n~~i~ayGqtgSGKT~Tm 65 (583)
...|+-.|..|||||+..
T Consensus 16 ~~~I~l~G~~GsGKsT~a 33 (233)
T 1ak2_A 16 GVRAVLLGPPGAGKGTQA 33 (233)
T ss_dssp CCEEEEECCTTSSHHHHH
T ss_pred CeEEEEECCCCCCHHHHH
Confidence 345888999999998754
No 492
>2fwr_A DNA repair protein RAD25; DNA unwinding, XPB, DNA binding protein; HET: DNA; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.19 c.37.1.19 PDB: 2fzl_A*
Probab=20.78 E-value=36 Score=35.41 Aligned_cols=24 Identities=25% Similarity=0.225 Sum_probs=17.0
Q ss_pred HHHHhcccceeEEEeeccCCCceEEe
Q psy9448 419 IDEVLSGYNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 419 v~~~l~G~n~~i~ayGqtgsGKT~Tm 444 (583)
+..++++.+ ++..++||+|||.+.
T Consensus 102 i~~i~~~~~--~ll~~~TGsGKT~~~ 125 (472)
T 2fwr_A 102 LERWLVDKR--GCIVLPTGSGKTHVA 125 (472)
T ss_dssp HHHHTTTTE--EEEECCTTSCHHHHH
T ss_pred HHHHHhcCC--EEEEeCCCCCHHHHH
Confidence 334455544 677899999999875
No 493
>2iut_A DNA translocase FTSK; nucleotide-binding, chromosome partition, ATP-binding, DNA- cell division, DNA translocation, KOPS, membrane; HET: DNA SAP; 2.25A {Pseudomonas aeruginosa} PDB: 2iuu_A*
Probab=20.74 E-value=19 Score=39.21 Aligned_cols=17 Identities=29% Similarity=0.538 Sum_probs=14.5
Q ss_pred eeEEEeeccCCCceEEe
Q psy9448 49 CTVFAYGQTGTGKTFTM 65 (583)
Q Consensus 49 ~~i~ayGqtgSGKT~Tm 65 (583)
.-++..|.||||||..+
T Consensus 215 pHlLIaG~TGSGKS~~L 231 (574)
T 2iut_A 215 PHLLVAGTTGSGKSVGV 231 (574)
T ss_dssp CCEEEECCTTSSHHHHH
T ss_pred CeeEEECCCCCCHHHHH
Confidence 45688899999999877
No 494
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=20.72 E-value=16 Score=34.64 Aligned_cols=20 Identities=25% Similarity=0.192 Sum_probs=16.2
Q ss_pred eeEEEeeccCCCceEEeecc
Q psy9448 428 CTVFAYGQTGTGKTFTMEGE 447 (583)
Q Consensus 428 ~~i~ayGqtgsGKT~Tm~G~ 447 (583)
..++-||..|+|||..+.+-
T Consensus 13 ~i~litG~mGsGKTT~ll~~ 32 (223)
T 2b8t_A 13 WIEFITGPMFAGKTAELIRR 32 (223)
T ss_dssp EEEEEECSTTSCHHHHHHHH
T ss_pred EEEEEECCCCCcHHHHHHHH
Confidence 45778899999999877763
No 495
>3k1j_A LON protease, ATP-dependent protease LON; ATP-binding, nucleotide-binding, Pro hydrolase; HET: ADP PE8; 2.00A {Thermococcus onnurineus}
Probab=20.62 E-value=24 Score=38.50 Aligned_cols=29 Identities=24% Similarity=0.320 Sum_probs=20.1
Q ss_pred hhhhHHHHhcccceeEEEeeccCCCceEEee
Q psy9448 36 VNPLIDEVLSGYNCTVFAYGQTGTGKTFTME 66 (583)
Q Consensus 36 ~~plv~~~l~G~n~~i~ayGqtgSGKT~Tm~ 66 (583)
++.+-..+-.| ..++-+|++|+|||..+.
T Consensus 50 l~~l~~~i~~g--~~vll~Gp~GtGKTtlar 78 (604)
T 3k1j_A 50 VEVIKTAANQK--RHVLLIGEPGTGKSMLGQ 78 (604)
T ss_dssp HHHHHHHHHTT--CCEEEECCTTSSHHHHHH
T ss_pred HhhccccccCC--CEEEEEeCCCCCHHHHHH
Confidence 34444444466 467789999999998763
No 496
>2d7d_A Uvrabc system protein B; helicase, protein-DNA-ADP ternary complex, hydrolase/DNA complex; HET: ADP; 2.10A {Bacillus subtilis} PDB: 2nmv_A* 2fdc_A* 1t5l_A 3uwx_B 1d9z_A* 1d9x_A 2d7d_B* 2nmv_B*
Probab=20.55 E-value=35 Score=37.72 Aligned_cols=49 Identities=27% Similarity=0.415 Sum_probs=34.9
Q ss_pred cccccccccccccccceeehhhhhhhHHHHhcccceeEEEeeccCCCceEEeec
Q psy9448 393 KTFGFDRVFSQESKQVDVYKYVVNPLIDEVLSGYNCTVFAYGQTGTGKTFTMEG 446 (583)
Q Consensus 393 k~f~fD~vf~~~~~q~~vy~~~~~~~v~~~l~G~n~~i~ayGqtgsGKT~Tm~G 446 (583)
+.|....-|.|...|..-+.. +++.+-.|... ....|.||||||++|-.
T Consensus 3 ~~~~~~~~~~p~~~Q~~~i~~----l~~~~~~~~~~-~~l~g~~gs~k~~~~a~ 51 (661)
T 2d7d_A 3 DRFELVSKYQPQGDQPKAIEK----LVKGIQEGKKH-QTLLGATGTGKTFTVSN 51 (661)
T ss_dssp CCCCCCCSCCCCTTHHHHHHH----HHHHHHTTCSE-EEEEECTTSCHHHHHHH
T ss_pred CcceeecCCCCCCCCHHHHHH----HHHHHhcCCCc-EEEECcCCcHHHHHHHH
Confidence 457777788999999766554 45555556432 34569999999999964
No 497
>2qnr_A Septin-2, protein NEDD5; structural genomics consortium, SGC, mitosis, GDP, C cycle, cell division, GTP-binding, nucleotide-binding; HET: GDP; 2.60A {Homo sapiens} PDB: 2qa5_A* 3ftq_A*
Probab=20.51 E-value=33 Score=33.80 Aligned_cols=24 Identities=29% Similarity=0.607 Sum_probs=15.8
Q ss_pred HHhcccceeEEEeeccCCCceEEe
Q psy9448 421 EVLSGYNCTVFAYGQTGTGKTFTM 444 (583)
Q Consensus 421 ~~l~G~n~~i~ayGqtgsGKT~Tm 444 (583)
.++.|++..|...|++|+|||..|
T Consensus 12 ~~l~~~~~~I~lvG~nG~GKSTLl 35 (301)
T 2qnr_A 12 SVKKGFEFTLMVVGESGLGKSTLI 35 (301)
T ss_dssp ------CEEEEEEEETTSSHHHHH
T ss_pred EEEcCCCEEEEEECCCCCCHHHHH
Confidence 367888999999999999999544
No 498
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=20.47 E-value=43 Score=39.00 Aligned_cols=20 Identities=25% Similarity=0.463 Sum_probs=18.7
Q ss_pred cccceeEEEeeccCCCceEE
Q psy9448 45 SGYNCTVFAYGQTGTGKTFT 64 (583)
Q Consensus 45 ~G~n~~i~ayGqtgSGKT~T 64 (583)
++.|.||+.-|.+|||||.+
T Consensus 143 ~~~~QsIiisGESGAGKTe~ 162 (995)
T 2ycu_A 143 DREDQSILCTGESGAGKTEN 162 (995)
T ss_dssp HCCCEEEEEECBTTSSHHHH
T ss_pred cCCCcEEEecCCCCCCchhh
Confidence 69999999999999999965
No 499
>2jaq_A Deoxyguanosine kinase; transferase, deoxyribonucleoside kinase; HET: DCP; 2.3A {Mycoplasma mycoides subsp} PDB: 2jat_A* 2jas_A*
Probab=20.39 E-value=25 Score=31.57 Aligned_cols=15 Identities=27% Similarity=0.578 Sum_probs=12.3
Q ss_pred EEEeeccCCCceEEe
Q psy9448 51 VFAYGQTGTGKTFTM 65 (583)
Q Consensus 51 i~ayGqtgSGKT~Tm 65 (583)
|.-.|..|||||+..
T Consensus 3 I~i~G~~GsGKsT~~ 17 (205)
T 2jaq_A 3 IAIFGTVGAGKSTIS 17 (205)
T ss_dssp EEEECCTTSCHHHHH
T ss_pred EEEECCCccCHHHHH
Confidence 667899999998644
No 500
>1pjr_A PCRA; DNA repair, DNA replication, SOS response, helicase, ATP- binding, DNA-binding; 2.50A {Geobacillus stearothermophilus} SCOP: c.37.1.19 c.37.1.19 PDB: 1qhg_A* 3pjr_A* 2pjr_A* 1qhh_B* 1qhh_D* 1qhh_A* 1qhh_C* 2pjr_B*
Probab=20.33 E-value=24 Score=39.55 Aligned_cols=21 Identities=19% Similarity=0.295 Sum_probs=17.4
Q ss_pred cceeEEEeeccCCCceEEeec
Q psy9448 47 YNCTVFAYGQTGTGKTFTMEG 67 (583)
Q Consensus 47 ~n~~i~ayGqtgSGKT~Tm~G 67 (583)
.++.++..|..|||||++|..
T Consensus 23 ~~g~~lV~AgAGSGKT~vL~~ 43 (724)
T 1pjr_A 23 TEGPLLIMAGAGSGKTRVLTH 43 (724)
T ss_dssp CSSCEEEEECTTSCHHHHHHH
T ss_pred CCCCEEEEEcCCCCHHHHHHH
Confidence 456778889999999999864
Done!