BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy945
(344 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q91W29|COX42_MOUSE Cytochrome c oxidase subunit 4 isoform 2, mitochondrial OS=Mus
musculus GN=Cox4i2 PE=2 SV=1
Length = 172
Score = 108 bits (271), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 80/136 (58%), Gaps = 5/136 (3%)
Query: 213 YID---NPMFPYPSIRFKA-ITKELEPLKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMN 268
Y+D +P P F +++E LK+KEKG W L+ EK LYR F +TF EMN
Sbjct: 38 YVDCYAQRSYPMPDEPFCTELSEEQRALKEKEKGSWTQLSQAEKVALYRLQFHETFAEMN 97
Query: 269 APTGEWKGAFGIAFMVVTVSLLTYVLMYKVGIFPEKAETLSEEHRQEMLQKMIDLRWNPI 328
+ EWK G F + + L + +V +FP+K TL+EE + + LQ+++D++ NPI
Sbjct: 98 HRSNEWKTVMGCVFFFIGFTALV-IWWQRVYVFPKKVVTLTEERKAQQLQRLLDMKSNPI 156
Query: 329 TGTASKWDYEKNDWKK 344
G A+ WDYEK +WKK
Sbjct: 157 QGLAAHWDYEKKEWKK 172
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 31/55 (56%)
Query: 35 LKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNASTGEWKGAFGIAFMVVTVSLL 89
LK+KEKG W L+ EK LYR F +TF EMN + EWK G F + + L
Sbjct: 65 LKEKEKGSWTQLSQAEKVALYRLQFHETFAEMNHRSNEWKTVMGCVFFFIGFTAL 119
>sp|Q96KJ9|COX42_HUMAN Cytochrome c oxidase subunit 4 isoform 2, mitochondrial OS=Homo
sapiens GN=COX4I2 PE=1 SV=2
Length = 171
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 75/127 (59%), Gaps = 2/127 (1%)
Query: 219 FPYPSIRFKA-ITKELEPLKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNAPTGEWKGA 277
+P P F + E + LK+KEKG W LT EK LYR F +TF EMN + EWK
Sbjct: 46 YPMPEEPFCTELNAEEQALKEKEKGSWTQLTHAEKVALYRLQFNETFAEMNRRSNEWKTV 105
Query: 278 FGIAFMVVTVSLLTYVLMYKVGIFPEKAETLSEEHRQEMLQKMIDLRWNPITGTASKWDY 337
G F + + L + +V +FP K TL++E + + LQ+M+D++ NP+ G AS+WDY
Sbjct: 106 MGCVFFFIGFAALV-IWWQRVYVFPPKPITLTDERKAQQLQRMLDMKVNPVQGLASRWDY 164
Query: 338 EKNDWKK 344
EK WKK
Sbjct: 165 EKKQWKK 171
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 34/61 (55%)
Query: 29 HSNEPPLKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNASTGEWKGAFGIAFMVVTVSL 88
++ E LK+KEKG W LT EK LYR F +TF EMN + EWK G F + +
Sbjct: 58 NAEEQALKEKEKGSWTQLTHAEKVALYRLQFNETFAEMNRRSNEWKTVMGCVFFFIGFAA 117
Query: 89 L 89
L
Sbjct: 118 L 118
>sp|Q91Y94|COX42_RAT Cytochrome c oxidase subunit 4 isoform 2, mitochondrial OS=Rattus
norvegicus GN=Cox4i2 PE=2 SV=1
Length = 172
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 73/116 (62%), Gaps = 1/116 (0%)
Query: 229 ITKELEPLKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNAPTGEWKGAFGIAFMVVTVS 288
+++E LK+KEKG W L+ EK LYR F +TF EMN + EWK G F + +
Sbjct: 58 LSEEQRALKEKEKGSWAQLSQAEKVALYRLQFHETFAEMNHRSNEWKTVMGCVFFFIGFT 117
Query: 289 LLTYVLMYKVGIFPEKAETLSEEHRQEMLQKMIDLRWNPITGTASKWDYEKNDWKK 344
L + +V +FP+K TL+EE + + LQ+++D++ NPI G ++ WDYEK +WKK
Sbjct: 118 ALV-IWWQRVYVFPKKVVTLTEERKAQQLQRLLDMKSNPIQGLSAHWDYEKKEWKK 172
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 31/55 (56%)
Query: 35 LKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNASTGEWKGAFGIAFMVVTVSLL 89
LK+KEKG W L+ EK LYR F +TF EMN + EWK G F + + L
Sbjct: 65 LKEKEKGSWAQLSQAEKVALYRLQFHETFAEMNHRSNEWKTVMGCVFFFIGFTAL 119
>sp|P80971|COX42_THUOB Cytochrome c oxidase subunit 4 isoform 2, mitochondrial OS=Thunnus
obesus PE=1 SV=2
Length = 176
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 95/180 (52%), Gaps = 15/180 (8%)
Query: 166 RALIKPKSLAA-SYSAASAHSNEPVAKEHFDFFPNREVVGYGFNGEPGYIDNPMFPYPSI 224
R+L+ ++ AA S S+A S++ E D +P Y D P P
Sbjct: 10 RSLLAGRATAAFSTSSARMASHDLEVAESVDM------------SKPLYWDRLDTPLPDR 57
Query: 225 RFKA-ITKELEPLKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNAPTGEWKGAFGIAFM 283
+K +T + LKQKEKG W L+ EEK LYR F QT+ EM P+ EWK FG F+
Sbjct: 58 PYKEDLTAADKSLKQKEKGPWGQLSKEEKIALYRLMFCQTYSEMKQPSSEWKTVFGGIFI 117
Query: 284 VVTVSLLTYVLMYKVGIFPEKAETLSEEHRQEMLQKMIDLRWNPITGTASKWDYEKNDWK 343
+ + L V + ++P + T +E + + L++M+D+R NPI G ++KWDYEK WK
Sbjct: 118 FLGFTGLV-VWWQALYVYPPRPRTFDDEWKAKQLKRMLDMRVNPIEGFSAKWDYEKGQWK 176
Score = 55.1 bits (131), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%)
Query: 35 LKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNASTGEWKGAFGIAFMVVTVSLL 89
LKQKEKG W L+ EEK LYR F QT+ EM + EWK FG F+ + + L
Sbjct: 70 LKQKEKGPWGQLSKEEKIALYRLMFCQTYSEMKQPSSEWKTVFGGIFIFLGFTGL 124
>sp|Q9I8U0|COX41_THUOB Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Thunnus
obesus PE=2 SV=1
Length = 169
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 78/137 (56%), Gaps = 6/137 (4%)
Query: 211 PGYIDNPMFPYPSIRF-KAITKELEPLKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNA 269
P Y D P P I + +A++ E + LK+KEKG W L+ EEK LYR SF Q+F EMN
Sbjct: 36 PAYFDRRENPLPDICYVQALSPEQQSLKEKEKGSWAALSNEEKIALYRISFKQSFAEMNK 95
Query: 270 PTGEWKGAFG--IAFMVVTVSLLTYVLMYKVGIFPEKAETLSEEHRQEMLQKMIDLRWNP 327
+ EWK G + F+ T ++ + Y G P T E++ + LQ+M+D+R NP
Sbjct: 96 GSSEWKSVVGGMLFFIGFTGLVVLWQRKYVYGAVP---HTFDPEYKAKELQRMLDMRINP 152
Query: 328 ITGTASKWDYEKNDWKK 344
+ G ++ WDYE WKK
Sbjct: 153 VEGFSAHWDYENKQWKK 169
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 29/44 (65%)
Query: 35 LKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNASTGEWKGAFG 78
LK+KEKG W L+ EEK LYR SF Q+F EMN + EWK G
Sbjct: 62 LKEKEKGSWAALSNEEKIALYRISFKQSFAEMNKGSSEWKSVVG 105
>sp|O46581|COX41_THEGE Cytochrome c oxidase subunit 4 isoform 1, mitochondrial (Fragment)
OS=Theropithecus gelada GN=COX4I1 PE=3 SV=1
Length = 144
Score = 101 bits (252), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 79/137 (57%), Gaps = 6/137 (4%)
Query: 211 PGYIDNPMFPYPSI-RFKAITKELEPLKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNA 269
P Y+D +P P + K ++ + LK+KEK W +L+++EK LYR F ++F EMN
Sbjct: 11 PAYVDRRDYPLPDVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR 70
Query: 270 PTGEWKGAFGIA--FMVVTVSLLTYVLMYKVGIFPEKAETLSEEHRQEMLQKMIDLRWNP 327
+ EWK G A F +T ++ + Y G P +T +E ++M+D++ NP
Sbjct: 71 RSNEWKTVVGTAMFFFGITALIVMWEKRYVYGPLP---QTFDKEWVAMQTKRMLDMKVNP 127
Query: 328 ITGTASKWDYEKNDWKK 344
I G ASKWDYEKN+WKK
Sbjct: 128 IQGLASKWDYEKNEWKK 144
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 30 SNEPPLKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNASTGEWKGAFGIAFMVVTVSLL 89
+++ LK+KEK W +L+++EK LYR F ++F EMN + EWK G A ++ L
Sbjct: 32 ASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRRSNEWKTVVGTAMFFFGITAL 91
>sp|P00423|COX41_BOVIN Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Bos
taurus GN=COX4I1 PE=1 SV=1
Length = 169
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 78/137 (56%), Gaps = 6/137 (4%)
Query: 211 PGYIDNPMFPYPSI-RFKAITKELEPLKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNA 269
P Y+D +P P + K ++ + LK+KEK W +L+++EK LYR F ++F EMN
Sbjct: 36 PSYVDRRDYPLPDVAHVKNLSASQKALKEKEKASWSSLSIDEKVELYRLKFKESFAEMNR 95
Query: 270 PTGEWKGAFGIA--FMVVTVSLLTYVLMYKVGIFPEKAETLSEEHRQEMLQKMIDLRWNP 327
T EWK G A F+ T LL + Y G P T EE + ++M+D++ P
Sbjct: 96 STNEWKTVVGAAMFFIGFTALLLIWEKHYVYGPIP---HTFEEEWVAKQTKRMLDMKVAP 152
Query: 328 ITGTASKWDYEKNDWKK 344
I G ++KWDY+KN+WKK
Sbjct: 153 IQGFSAKWDYDKNEWKK 169
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 30 SNEPPLKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNASTGEWKGAFGIA--FMVVTVS 87
+++ LK+KEK W +L+++EK LYR F ++F EMN ST EWK G A F+ T
Sbjct: 57 ASQKALKEKEKASWSSLSIDEKVELYRLKFKESFAEMNRSTNEWKTVVGAAMFFIGFTAL 116
Query: 88 LLTYVLMYKVG 98
LL + Y G
Sbjct: 117 LLIWEKHYVYG 127
>sp|O46586|COX41_PERPO Cytochrome c oxidase subunit 4 isoform 1, mitochondrial (Fragment)
OS=Perodicticus potto edwarsi GN=COX4I1 PE=3 SV=1
Length = 137
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 2/135 (1%)
Query: 211 PGYIDNPMFPYPSI-RFKAITKELEPLKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNA 269
P Y+D +P P + K ++ + LK+KEK W NL+++EK LYR F ++F EMN
Sbjct: 4 PSYVDRRDYPLPDVAHVKHLSASQKALKEKEKASWSNLSMDEKVELYRIQFKESFAEMNR 63
Query: 270 PTGEWKGAFGIAFMVVTVSLLTYVLMYKVGIFPEKAETLSEEHRQEMLQKMIDLRWNPIT 329
T EWK G A + + + L V+ K ++ T + + +KM+D++ NPI
Sbjct: 64 GTNEWKTVVGTAMLFIGFTALI-VIWEKRYVYGPIPHTFDPDWVAKQTKKMLDMKVNPIQ 122
Query: 330 GTASKWDYEKNDWKK 344
G A+KWDYEK +WKK
Sbjct: 123 GFAAKWDYEKQEWKK 137
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%)
Query: 30 SNEPPLKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNASTGEWKGAFGIAFMVVTVSLL 89
+++ LK+KEK W NL+++EK LYR F ++F EMN T EWK G A + + + L
Sbjct: 25 ASQKALKEKEKASWSNLSMDEKVELYRIQFKESFAEMNRGTNEWKTVVGTAMLFIGFTAL 84
Query: 90 TYV 92
+
Sbjct: 85 IVI 87
>sp|P10888|COX41_RAT Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus
norvegicus GN=Cox4i1 PE=1 SV=1
Length = 169
Score = 99.4 bits (246), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 77/137 (56%), Gaps = 6/137 (4%)
Query: 211 PGYIDNPMFPYPSI-RFKAITKELEPLKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNA 269
P Y+D +P P + K ++ + LK+KEK DW +L+ +EK LYR F ++F EMN
Sbjct: 36 PSYVDRRDYPLPDVAHVKLLSASQKALKEKEKADWSSLSRDEKVQLYRIQFNESFAEMNK 95
Query: 270 PTGEWKGAFGIA--FMVVTVSLLTYVLMYKVGIFPEKAETLSEEHRQEMLQKMIDLRWNP 327
T EWK G+A F+ T +L + Y G P T + ++M+D++ NP
Sbjct: 96 GTNEWKTVVGLAMFFIGFTALVLIWEKSYVYGPIP---HTFDRDWVAMQTKRMLDMKVNP 152
Query: 328 ITGTASKWDYEKNDWKK 344
I G ++KWDY KN+WKK
Sbjct: 153 IQGFSAKWDYNKNEWKK 169
Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%)
Query: 30 SNEPPLKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNASTGEWKGAFGIAFMVVTVSLL 89
+++ LK+KEK DW +L+ +EK LYR F ++F EMN T EWK G+A + + L
Sbjct: 57 ASQKALKEKEKADWSSLSRDEKVQLYRIQFNESFAEMNKGTNEWKTVVGLAMFFIGFTAL 116
Query: 90 TYV 92
+
Sbjct: 117 VLI 119
>sp|O46578|COX41_GORGO Cytochrome c oxidase subunit 4 isoform 1, mitochondrial (Fragment)
OS=Gorilla gorilla gorilla GN=COX4I1 PE=3 SV=1
Length = 144
Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 80/137 (58%), Gaps = 6/137 (4%)
Query: 211 PGYIDNPMFPYPSI-RFKAITKELEPLKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNA 269
P Y+D +P P + K ++ + LK+KEK W +L+++EK LYR F ++F EMN
Sbjct: 11 PAYMDRRDYPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR 70
Query: 270 PTGEWKGAFGIA--FMVVTVSLLTYVLMYKVGIFPEKAETLSEEHRQEMLQKMIDLRWNP 327
+ EWK G A F+ T ++ + Y G P ++ +E + ++M+D++ NP
Sbjct: 71 GSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLP---QSFDKEWVAKQTKRMLDMKVNP 127
Query: 328 ITGTASKWDYEKNDWKK 344
I G ASKWDYEKN+WKK
Sbjct: 128 IQGLASKWDYEKNEWKK 144
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 30 SNEPPLKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNASTGEWKGAFGIAFMVVTVSLL 89
+++ LK+KEK W +L+++EK LYR F ++F EMN + EWK G A + + L
Sbjct: 32 ASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTAL 91
Query: 90 TYVLMYK 96
V+M++
Sbjct: 92 --VIMWQ 96
>sp|P13073|COX41_HUMAN Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Homo
sapiens GN=COX4I1 PE=1 SV=1
Length = 169
Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 79/137 (57%), Gaps = 6/137 (4%)
Query: 211 PGYIDNPMFPYPSI-RFKAITKELEPLKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNA 269
P Y+D P P + K ++ + LK+KEK W +L+++EK LYR F ++F EMN
Sbjct: 36 PAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR 95
Query: 270 PTGEWKGAFGIA--FMVVTVSLLTYVLMYKVGIFPEKAETLSEEHRQEMLQKMIDLRWNP 327
+ EWK G A F+ T ++ + Y G P ++ +E + ++M+D++ NP
Sbjct: 96 GSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLP---QSFDKEWVAKQTKRMLDMKVNP 152
Query: 328 ITGTASKWDYEKNDWKK 344
I G ASKWDYEKN+WKK
Sbjct: 153 IQGLASKWDYEKNEWKK 169
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 30 SNEPPLKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNASTGEWKGAFGIAFMVVTVSLL 89
+++ LK+KEK W +L+++EK LYR F ++F EMN + EWK G A + + L
Sbjct: 57 ASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTAL 116
Query: 90 TYVLMYK 96
V+M++
Sbjct: 117 --VIMWQ 121
>sp|O46577|COX41_PANTR Cytochrome c oxidase subunit 4 isoform 1, mitochondrial (Fragment)
OS=Pan troglodytes GN=COX4I1 PE=3 SV=1
Length = 144
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 79/137 (57%), Gaps = 6/137 (4%)
Query: 211 PGYIDNPMFPYPSI-RFKAITKELEPLKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNA 269
P Y+D P P + K ++ + LK+KEK W +L+++EK LYR F ++F EMN
Sbjct: 11 PAYMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR 70
Query: 270 PTGEWKGAFGIA--FMVVTVSLLTYVLMYKVGIFPEKAETLSEEHRQEMLQKMIDLRWNP 327
+ EWK G A F+ T ++ + Y G P ++ +E + ++M+D++ NP
Sbjct: 71 GSNEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLP---QSFDKEWVAKQTKRMLDMKVNP 127
Query: 328 ITGTASKWDYEKNDWKK 344
I G ASKWDYEKN+WKK
Sbjct: 128 IQGLASKWDYEKNEWKK 144
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 30 SNEPPLKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNASTGEWKGAFGIAFMVVTVSLL 89
+++ LK+KEK W +L+++EK LYR F ++F EMN + EWK G A + + L
Sbjct: 32 ASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTAL 91
Query: 90 TYVLMYK 96
V+M++
Sbjct: 92 --VIMWQ 96
>sp|O46580|COX41_HYLAG Cytochrome c oxidase subunit 4 isoform 1, mitochondrial (Fragment)
OS=Hylobates agilis GN=COX4I1 PE=3 SV=1
Length = 144
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 78/137 (56%), Gaps = 6/137 (4%)
Query: 211 PGYIDNPMFPYPSI-RFKAITKELEPLKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNA 269
P Y+D P P + K ++ + LK+ EK W +L+++EK LYR F ++F EMN
Sbjct: 11 PAYVDRRDHPLPEVAHVKLLSASQKALKENEKAAWSSLSMDEKVELYRIKFKESFAEMNR 70
Query: 270 PTGEWKGAFGIA--FMVVTVSLLTYVLMYKVGIFPEKAETLSEEHRQEMLQKMIDLRWNP 327
+ EWK G A F+ T ++ + Y G P+ T +E + ++M+D++ NP
Sbjct: 71 GSNEWKTVVGGAMFFIGFTALIIMWQKHYVYGPLPQ---TFDKEWVGKQTKRMLDMKVNP 127
Query: 328 ITGTASKWDYEKNDWKK 344
I G ASKWDYEKN+WKK
Sbjct: 128 IQGLASKWDYEKNEWKK 144
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 30 SNEPPLKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNASTGEWKGAFGIAFMVVTVSLL 89
+++ LK+ EK W +L+++EK LYR F ++F EMN + EWK G A + + L
Sbjct: 32 ASQKALKENEKAAWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTAL 91
Query: 90 TYVLMYK 96
++M++
Sbjct: 92 --IIMWQ 96
>sp|O46584|COX41_AOTAZ Cytochrome c oxidase subunit 4 isoform 1, mitochondrial (Fragment)
OS=Aotus azarae GN=COX4I1 PE=3 SV=1
Length = 144
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 76/137 (55%), Gaps = 6/137 (4%)
Query: 211 PGYIDNPMFPYPSI-RFKAITKELEPLKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNA 269
P Y+D +P P + + ++ + LK+KEK W +L+++EK LYR F ++F EMN
Sbjct: 11 PSYVDRRDYPLPDVAHVRHLSASQKALKEKEKASWSSLSMDEKVELYRIQFKESFAEMNR 70
Query: 270 PTGEWKGAFGIAFMVVTVSLLTYVL--MYKVGIFPEKAETLSEEHRQEMLQKMIDLRWNP 327
+ EWK G A + + + +L Y G P T +E ++M+DL+ NP
Sbjct: 71 GSNEWKTVVGAAMFFIGFTAILIILEKRYVYGPLP---HTFDKEWVAMQTKRMLDLKVNP 127
Query: 328 ITGTASKWDYEKNDWKK 344
+ G ASKWDY+K +WKK
Sbjct: 128 VDGLASKWDYDKKEWKK 144
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 30 SNEPPLKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNASTGEWKGAFGIAFMVVTVSLL 89
+++ LK+KEK W +L+++EK LYR F ++F EMN + EWK G A + + +
Sbjct: 32 ASQKALKEKEKASWSSLSMDEKVELYRIQFKESFAEMNRGSNEWKTVVGAAMFFIGFTAI 91
Query: 90 TYVL 93
+L
Sbjct: 92 LIIL 95
>sp|P19783|COX41_MOUSE Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Mus
musculus GN=Cox4i1 PE=1 SV=2
Length = 169
Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 76/137 (55%), Gaps = 6/137 (4%)
Query: 211 PGYIDNPMFPYPSI-RFKAITKELEPLKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNA 269
P Y D +P P + ++ + LK+KEK DW +L+ +EK LYR F ++F EMN
Sbjct: 36 PTYADRRDYPLPDVAHVTMLSASQKALKEKEKADWSSLSRDEKVQLYRIQFNESFAEMNR 95
Query: 270 PTGEWKGAFGIA--FMVVTVSLLTYVLMYKVGIFPEKAETLSEEHRQEMLQKMIDLRWNP 327
T EWK G+A F+ T +L + Y G P T + ++M+D++ NP
Sbjct: 96 GTNEWKTVVGMAMFFIGFTALVLIWEKSYVYGPIP---HTFDRDWVAMQTKRMLDMKANP 152
Query: 328 ITGTASKWDYEKNDWKK 344
I G ++KWDY+KN+WKK
Sbjct: 153 IQGFSAKWDYDKNEWKK 169
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%)
Query: 30 SNEPPLKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNASTGEWKGAFGIAFMVVTVSLL 89
+++ LK+KEK DW +L+ +EK LYR F ++F EMN T EWK G+A + + L
Sbjct: 57 ASQKALKEKEKADWSSLSRDEKVQLYRIQFNESFAEMNRGTNEWKTVVGMAMFFIGFTAL 116
Query: 90 TYV 92
+
Sbjct: 117 VLI 119
>sp|O46579|COX41_PONPY Cytochrome c oxidase subunit 4 isoform 1, mitochondrial (Fragment)
OS=Pongo pygmaeus GN=COX4I1 PE=3 SV=1
Length = 144
Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 77/134 (57%), Gaps = 2/134 (1%)
Query: 212 GYIDNPMFPYPSI-RFKAITKELEPLKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNAP 270
Y+D P P + K ++ + LK+KEK W +L+++EK LYR F ++F EMN
Sbjct: 12 AYVDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRG 71
Query: 271 TGEWKGAFGIAFMVVTVSLLTYVLMYKVGIFPEKAETLSEEHRQEMLQKMIDLRWNPITG 330
+ EWK G A + + L ++ K ++ ++ +E + ++M+D++ NPI G
Sbjct: 72 SNEWKTVVGGAMFFIGFTALI-IMWQKRHVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQG 130
Query: 331 TASKWDYEKNDWKK 344
ASKWDYEKN+WKK
Sbjct: 131 LASKWDYEKNEWKK 144
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 30 SNEPPLKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNASTGEWKGAFGIAFMVVTVSLL 89
+++ LK+KEK W +L+++EK LYR F ++F EMN + EWK G A + + L
Sbjct: 32 ASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGSNEWKTVVGGAMFFIGFTAL 91
Query: 90 TYVLMYK 96
++M++
Sbjct: 92 --IIMWQ 96
>sp|O46585|COX41_PITPI Cytochrome c oxidase subunit 4 isoform 1, mitochondrial (Fragment)
OS=Pithecia pithecia GN=COX4I1 PE=3 SV=1
Length = 144
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 75/136 (55%), Gaps = 6/136 (4%)
Query: 212 GYIDNPMFPYPSI-RFKAITKELEPLKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNAP 270
Y+D +P P + + ++ + LK+KEK W +L+++EK LYR F ++F EMN
Sbjct: 12 SYVDRRDYPLPDVAHVRHLSASQKALKEKEKASWSSLSMDEKVELYRIQFKESFAEMNRG 71
Query: 271 TGEWKGAFGIA--FMVVTVSLLTYVLMYKVGIFPEKAETLSEEHRQEMLQKMIDLRWNPI 328
+ EWK G A F+ T L+ Y G P T +E ++M+DL+ NP+
Sbjct: 72 SNEWKTVVGAAMFFIGFTAILIMLEKRYVYGPLP---HTFDKEWVAMQTKRMLDLKVNPV 128
Query: 329 TGTASKWDYEKNDWKK 344
G ASKWDYEK +WKK
Sbjct: 129 DGLASKWDYEKKEWKK 144
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 30 SNEPPLKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNASTGEWKGAFGIAFMVVTVSLL 89
+++ LK+KEK W +L+++EK LYR F ++F EMN + EWK G A + + +
Sbjct: 32 ASQKALKEKEKASWSSLSMDEKVELYRIQFKESFAEMNRGSNEWKTVVGAAMFFIGFTAI 91
Query: 90 TYVL 93
+L
Sbjct: 92 LIML 95
>sp|Q9TTT8|COX41_RABIT Cytochrome c oxidase subunit 4 isoform 1, mitochondrial
OS=Oryctolagus cuniculus GN=COX4I1 PE=2 SV=1
Length = 169
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 76/137 (55%), Gaps = 6/137 (4%)
Query: 211 PGYIDNPMFPYPSI-RFKAITKELEPLKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNA 269
P Y+D +P P + K ++ + LK+KEK W +LT +EK LYR F ++F EMN
Sbjct: 36 PSYVDRRDYPLPDVAHVKQLSAGQKALKEKEKAPWGSLTRDEKVELYRIQFNESFAEMNR 95
Query: 270 PTGEWKGAFGIA--FMVVTVSLLTYVLMYKVGIFPEKAETLSEEHRQEMLQKMIDLRWNP 327
T EWK G A F+ T +L + Y G P T +E ++M+D++ +P
Sbjct: 96 GTNEWKTVVGTALFFIGFTALILIWEKHYVYGPIP---HTFDKEWVAMQTKRMLDMKVSP 152
Query: 328 ITGTASKWDYEKNDWKK 344
I G ++KWDY KN+W+K
Sbjct: 153 IQGFSAKWDYNKNEWRK 169
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%)
Query: 30 SNEPPLKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNASTGEWKGAFGIAFMVVTVSLL 89
+ + LK+KEK W +LT +EK LYR F ++F EMN T EWK G A + + L
Sbjct: 57 AGQKALKEKEKAPWGSLTRDEKVELYRIQFNESFAEMNRGTNEWKTVVGTALFFIGFTAL 116
Query: 90 TYV 92
+
Sbjct: 117 ILI 119
>sp|O94760|DDAH1_HUMAN N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Homo sapiens
GN=DDAH1 PE=1 SV=3
Length = 285
Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 96 KVGIDEARRQHESFVALL-RDLGLDVIELPPDEDLPESVFIEDTAVIVNGIVLITKPGNT 154
+V + A RQH+ +V +L LGL V+ELP DE LP+ VF+ED AV+ LIT+PG
Sbjct: 37 EVDVARAERQHQLYVGVLGSKLGLQVVELPADESLPDCVFVEDVAVVCEETALITRPGAP 96
Query: 155 QRHKEV 160
R KEV
Sbjct: 97 SRRKEV 102
>sp|Q9CWS0|DDAH1_MOUSE N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Mus musculus
GN=Ddah1 PE=1 SV=3
Length = 285
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 76 AFGIAFMVVTV----SLLTYVLMYKVG--IDEAR--RQHESFVALL-RDLGLDVIELPPD 126
AFG A V SL + L G +D AR RQHE +V +L LGL V++LP D
Sbjct: 9 AFGRATHAVVRAPPESLCRHALRRSQGEEVDFARAERQHELYVGVLGSKLGLQVVQLPAD 68
Query: 127 EDLPESVFIEDTAVIVNGIVLITKPGNTQRHKEV 160
E LP+ VF+ED AV+ LIT+PG R KEV
Sbjct: 69 ESLPDCVFVEDVAVVCEETALITRPGAPSRRKEV 102
>sp|O08557|DDAH1_RAT N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus
norvegicus GN=Ddah1 PE=1 SV=3
Length = 285
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 48/79 (60%), Gaps = 5/79 (6%)
Query: 87 SLLTYVLMYKVG--IDEAR--RQHESFVALL-RDLGLDVIELPPDEDLPESVFIEDTAVI 141
SL + L G +D AR RQH+ +V +L LGL V++LP DE LP+ VF+ED AV+
Sbjct: 24 SLCRHALRRSQGEEVDFARAERQHQLYVGVLGSKLGLQVVQLPADESLPDCVFVEDVAVV 83
Query: 142 VNGIVLITKPGNTQRHKEV 160
LIT+PG R KEV
Sbjct: 84 CEETALITRPGAPSRRKEV 102
>sp|O46587|COX41_MANSP Cytochrome c oxidase subunit 4 isoform 1, mitochondrial (Fragment)
OS=Mandrillus sphinx GN=COX4I1 PE=3 SV=1
Length = 99
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 211 PGYIDNPMFPYPSI-RFKAITKELEPLKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNA 269
P Y+D +P P + K ++ + LK+KEK W +L+++EK LYR F ++F EMN
Sbjct: 11 PAYVDRRDYPLPDVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNR 70
Query: 270 PTGEWKGAFGIAFMVVTVSLLTYVLMYK 297
+ EWK G A + ++ L V+M++
Sbjct: 71 RSNEWKTVVGTAMFFIGITAL--VIMWE 96
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 30 SNEPPLKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNASTGEWKGAFGIAFMVVTVSLL 89
+++ LK+KEK W +L+++EK LYR F ++F EMN + EWK G A + ++ L
Sbjct: 32 ASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRRSNEWKTVVGTAMFFIGITAL 91
Query: 90 TYVLMYK 96
V+M++
Sbjct: 92 --VIMWE 96
>sp|O46582|COX41_SAISC Cytochrome c oxidase subunit 4 isoform 1, mitochondrial (Fragments)
OS=Saimiri sciureus GN=COX4I1 PE=3 SV=2
Length = 124
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 66/139 (47%), Gaps = 26/139 (18%)
Query: 209 GEPGYIDNPMFPYPSI-RFKAITKELEPLKQKEKGDWKNLTLEEK--KTLYRASFAQTFV 265
P Y+D +P P + + ++ + LK+KEK W +L+++EK KT+ A+
Sbjct: 9 ARPSYVDRRDYPLPDVAHVRHLSASQKALKEKEKASWSSLSMDEKVEKTVVGAAM----- 63
Query: 266 EMNAPTGEWKGAFGIAFMVVTVSLLTYVLMYKVGIFPEKAETLSEEHRQEMLQKMIDLRW 325
F I F + V L Y G P T +E ++M+DL+
Sbjct: 64 ------------FFIGFTAILVILEK---RYVYGPLPH---TFDKEWVAMQTKRMLDLKM 105
Query: 326 NPITGTASKWDYEKNDWKK 344
NPI G ASKWDYEK +WKK
Sbjct: 106 NPIDGLASKWDYEKKEWKK 124
>sp|O46588|COX41_TRACR Cytochrome c oxidase subunit 4 isoform 1, mitochondrial (Fragment)
OS=Trachypithecus cristatus GN=COX4I1 PE=3 SV=1
Length = 99
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 211 PGYIDNPMFPYPSI-RFKAITKELEPLKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNA 269
P Y+D +P P + K ++ + LK+KEK W +L+++EK LYR F +TF EMN
Sbjct: 11 PAYVDRRDYPLPDVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKETFAEMNR 70
Query: 270 PTGEWKGAFGIAFMVVTVSLLTYVLMYK 297
+ EWK G A + + L ++M++
Sbjct: 71 GSNEWKTVVGTATFFIGFTAL--IIMWQ 96
Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 30 SNEPPLKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNASTGEWKGAFGIAFMVVTVSLL 89
+++ LK+KEK W +L+++EK LYR F +TF EMN + EWK G A + + L
Sbjct: 32 ASQKALKEKEKASWSSLSMDEKVELYRIKFKETFAEMNRGSNEWKTVVGTATFFIGFTAL 91
Query: 90 TYVLMYK 96
++M++
Sbjct: 92 --IIMWQ 96
>sp|P56965|DDAH1_BOVIN N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Bos taurus
GN=DDAH1 PE=1 SV=3
Length = 285
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 102 ARRQHESFVALL-RDLGLDVIELPPDEDLPESVFIEDTAVIVNGIVLITKPGNTQRHKE 159
A RQH+ +V +L LGL V++LP DE LP+ VF+ED AV+ LIT+PG R KE
Sbjct: 43 AERQHQLYVGVLGSKLGLQVVQLPADESLPDCVFVEDVAVVCEETALITRPGAPSRRKE 101
>sp|Q9I4E3|DDAH_PSEAE N(G),N(G)-dimethylarginine dimethylaminohydrolase OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=PA1195 PE=1 SV=1
Length = 254
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 101 EARRQHESFVALLRDLGLDVIELPPDEDLPESVFIEDTAVIVNGIVLITKPGNTQRHKEV 160
+A QH +++ L+ +D+ LPPDE P+SVF+ED + + +IT+PG R E
Sbjct: 30 KALEQHNAYIRALQTCDVDITLLPPDERFPDSVFVEDPVLCTSRCAIITRPGAESRRGET 89
Query: 161 AV 162
+
Sbjct: 90 EI 91
>sp|Q9X7M4|DDAH_STRCO N(G),N(G)-dimethylarginine dimethylaminohydrolase OS=Streptomyces
coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=ddaH
PE=3 SV=1
Length = 258
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%)
Query: 87 SLLTYVLMYKVGIDEARRQHESFVALLRDLGLDVIELPPDEDLPESVFIEDTAVIVNGIV 146
L+T+V KV A Q +++V L G + +E+ P +D P+SVF+ED V+ +
Sbjct: 18 GLVTHVEREKVDHGLALEQWDAYVEALGAHGWETLEVDPADDCPDSVFVEDAVVVFRNVA 77
Query: 147 LITKPGNTQRHKEVA 161
LIT+PG R E A
Sbjct: 78 LITRPGAESRRAETA 92
>sp|Q95283|COX41_PIG Cytochrome c oxidase subunit 4 isoform 1, mitochondrial (Fragment)
OS=Sus scrofa GN=COX4I1 PE=3 SV=1
Length = 97
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 211 PGYIDNPMFPYPSI-RFKAITKELEPLKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNA 269
P Y+D +P P + K ++ + K+KEK W +L+++EK LYR F ++F EMN
Sbjct: 36 PVYVDRRDYPLPDVAHVKNLSASQKAXKEKEKASWSSLSMDEKVELYRLKFNESFAEMNR 95
Query: 270 PT 271
T
Sbjct: 96 ST 97
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 30 SNEPPLKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNAST 70
+++ K+KEK W +L+++EK LYR F ++F EMN ST
Sbjct: 57 ASQKAXKEKEKASWSSLSMDEKVELYRLKFNESFAEMNRST 97
>sp|Q3SX44|DDAH2_BOVIN N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 OS=Bos taurus
GN=DDAH2 PE=2 SV=1
Length = 285
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 101 EARRQHESFVALLRD-LGLDVIELPPDEDLPESVFIEDTAVIVNGIVLITKPGNTQRHKE 159
+A+R+H LR LGL ++ELPP+E LP + DTAVI LIT+P + R E
Sbjct: 40 KAQREHGVLGGKLRQRLGLQLVELPPEESLPLGPLLGDTAVIQGDTALITRPWSPARRPE 99
Query: 160 V 160
V
Sbjct: 100 V 100
>sp|Q9Y8N2|Y2601_AERPE Uncharacterized protein APE_2601.1 OS=Aeropyrum pernix (strain ATCC
700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
GN=APE_2601.1 PE=3 SV=2
Length = 270
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 100 DEARRQHESFVALLRDLGLDVIELPPDEDLPESVFIEDTAVIVNG--IVLITKPGNTQRH 157
+EA Q++ +V L G+ V EL P ED P+SVFI+DTAVI G + ++ + G R
Sbjct: 39 EEASAQYKVYVERLHSAGITVKELGPLEDYPDSVFIQDTAVIGGGSRVAVLARFGAPSRR 98
Query: 158 KE 159
E
Sbjct: 99 GE 100
>sp|O93980|COX5_ASPNG Cytochrome c oxidase polypeptide 5, mitochondrial OS=Aspergillus
niger GN=cox5 PE=3 SV=1
Length = 197
Score = 40.8 bits (94), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Query: 236 LKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNAPTGEWKGAFGIAFMVVTVSLLTYVLM 295
L+ + K DW +TL+EKK Y SF P GE I F V ++L+++ +
Sbjct: 85 LRDRMKVDWHQMTLQEKKAAYWISFGPHGPRSVPPKGE---NLKIFFKVAQLTLVSFGIF 141
Query: 296 YKVGIFPE-KAETLSEEHRQEMLQKMIDLRWNPITGTASK 334
Y + +F + + +T+++E ++ + + NPI G +++
Sbjct: 142 YVIHLFAKPQPKTMTKEWQEASNEYAKQEKINPIYGISAE 181
Score = 32.3 bits (72), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 35 LKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNASTGEWKGAFGIAFMVVTVSLLTYVLM 94
L+ + K DW +TL+EKK Y SF GE I F V ++L+++ +
Sbjct: 85 LRDRMKVDWHQMTLQEKKAAYWISFGPHGPRSVPPKGE---NLKIFFKVAQLTLVSFGIF 141
Query: 95 YKVGI 99
Y + +
Sbjct: 142 YVIHL 146
>sp|P06810|COX5_NEUCR Cytochrome c oxidase polypeptide 5, mitochondrial OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=cya-4 PE=3 SV=2
Length = 171
Score = 38.5 bits (88), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Query: 236 LKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNAPTGEWKGAFGIAFMVVTVSLLTYVLM 295
L+ + KG+W +LTL+EKK Y +F P GE K V +S + + M
Sbjct: 60 LRDRMKGNWADLTLQEKKAAYYIAFGPHGPRALPPPGEQKKVLAYTVAGVFLSFVIFATM 119
Query: 296 YKVGIFPEKAETLSEEHRQEMLQKMIDLRWNPITGTASK 334
P T+++E ++ + + + +P+TG S+
Sbjct: 120 RAFAKPPP--ATMTKEWQEATNEFLKAQKSDPLTGLTSE 156
Score = 33.1 bits (74), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 27/60 (45%)
Query: 35 LKQKEKGDWKNLTLEEKKTLYRASFAQTFVEMNASTGEWKGAFGIAFMVVTVSLLTYVLM 94
L+ + KG+W +LTL+EKK Y +F GE K V +S + + M
Sbjct: 60 LRDRMKGNWADLTLQEKKAAYYIAFGPHGPRALPPPGEQKKVLAYTVAGVFLSFVIFATM 119
>sp|Q99LD8|DDAH2_MOUSE N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 OS=Mus musculus
GN=Ddah2 PE=1 SV=1
Length = 285
Score = 38.1 bits (87), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 23/39 (58%)
Query: 122 ELPPDEDLPESVFIEDTAVIVNGIVLITKPGNTQRHKEV 160
ELPP+E LP + DTAVI LIT+P + R EV
Sbjct: 62 ELPPEESLPLGPLLGDTAVIQGDTALITRPWSPARRPEV 100
>sp|Q6MG60|DDAH2_RAT N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 OS=Rattus
norvegicus GN=Ddah2 PE=1 SV=1
Length = 285
Score = 38.1 bits (87), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 23/39 (58%)
Query: 122 ELPPDEDLPESVFIEDTAVIVNGIVLITKPGNTQRHKEV 160
ELPP+E LP + DTAVI LIT+P + R EV
Sbjct: 62 ELPPEESLPLGPLLGDTAVIQGDTALITRPWSPARRPEV 100
>sp|O95865|DDAH2_HUMAN N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 OS=Homo sapiens
GN=DDAH2 PE=1 SV=1
Length = 285
Score = 38.1 bits (87), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 23/39 (58%)
Query: 122 ELPPDEDLPESVFIEDTAVIVNGIVLITKPGNTQRHKEV 160
ELPP+E LP + DTAVI LIT+P + R EV
Sbjct: 62 ELPPEESLPLGPLLGDTAVIQGDTALITRPWSPARRPEV 100
>sp|O46590|COX41_SAIUS Cytochrome c oxidase subunit 4 isoform 1, mitochondrial (Fragment)
OS=Saimiri ustus GN=COX4I1 PE=3 SV=1
Length = 55
Score = 35.8 bits (81), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 202 VVGYGFNGEPGYIDNPMFPYPSI-RFKAITKELEPLKQKEKGDWKNLTLEEK 252
VV P Y+D +P P + + ++ + LK+KEK W +L+++EK
Sbjct: 2 VVKSEDYARPSYVDRRDYPLPDVAHVRHLSASQKALKEKEKASWSSLSMDEK 53
>sp|O46589|COX41_CEBAP Cytochrome c oxidase subunit 4 isoform 1, mitochondrial (Fragment)
OS=Cebus apella GN=COX4I1 PE=3 SV=1
Length = 55
Score = 35.8 bits (81), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 211 PGYIDNPMFPYPSI-RFKAITKELEPLKQKEKGDWKNLTLEEK 252
P Y+D +P P + + ++ + LK+KEK W +L+++EK
Sbjct: 11 PSYVDRRDYPLPDVAHVRHLSASQKALKEKEKASWSSLSMDEK 53
>sp|P41141|ARCA_MYCHO Arginine deiminase OS=Mycoplasma hominis GN=arcA PE=3 SV=2
Length = 409
Score = 33.5 bits (75), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 21/23 (91%)
Query: 101 EARRQHESFVALLRDLGLDVIEL 123
+AR++H+SFV +++D G++V+EL
Sbjct: 53 DARKEHQSFVKIMKDRGINVVEL 75
>sp|A4WU32|NUOC_RHOS5 NADH-quinone oxidoreductase subunit C OS=Rhodobacter sphaeroides
(strain ATCC 17025 / ATH 2.4.3) GN=nuoC PE=3 SV=1
Length = 200
Score = 32.7 bits (73), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 15/74 (20%)
Query: 179 SAASAHSNEPVA----KEHFDFF-------PN--REVVGYGFNGEPGYIDNPMFPYPSIR 225
+ AS HS P A +E FD F P+ R + YGF G P D P Y +R
Sbjct: 98 TVASIHSVHPSANWFEREVFDMFGILFTGHPDLRRILTDYGFRGHPMRKDFPTTGYTEVR 157
Query: 226 FKAITKEL--EPLK 237
+ + K + EP+K
Sbjct: 158 YDEVQKRVIYEPVK 171
>sp|B9KQW2|NUOC_RHOSK NADH-quinone oxidoreductase subunit C OS=Rhodobacter sphaeroides
(strain KD131 / KCTC 12085) GN=nuoC PE=3 SV=1
Length = 200
Score = 32.7 bits (73), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 15/74 (20%)
Query: 179 SAASAHSNEPVA----KEHFDFF-------PN--REVVGYGFNGEPGYIDNPMFPYPSIR 225
+ AS HS P A +E FD F P+ R + YGF G P D P Y +R
Sbjct: 98 TVASIHSVHPSANWFEREVFDMFGILFTGHPDLRRILTDYGFRGHPMRKDFPTTGYTEVR 157
Query: 226 FKAITKEL--EPLK 237
+ + K + EP+K
Sbjct: 158 YDEVQKRVVYEPVK 171
>sp|Q3J3F9|NUOC_RHOS4 NADH-quinone oxidoreductase subunit C OS=Rhodobacter sphaeroides
(strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)
GN=nuoC PE=3 SV=1
Length = 200
Score = 32.3 bits (72), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 15/74 (20%)
Query: 179 SAASAHSNEPVA----KEHFDFF-------PN--REVVGYGFNGEPGYIDNPMFPYPSIR 225
+ AS HS P A +E FD F P+ R + YGF G P D P Y +R
Sbjct: 98 TVASIHSVHPSANWFEREVFDMFGILFTGHPDLRRILTDYGFRGHPMRKDFPTTGYTEVR 157
Query: 226 FKAITKEL--EPLK 237
+ + K + EP+K
Sbjct: 158 YDEVQKRVVYEPVK 171
>sp|A3PIX0|NUOC_RHOS1 NADH-quinone oxidoreductase subunit C OS=Rhodobacter sphaeroides
(strain ATCC 17029 / ATH 2.4.9) GN=nuoC PE=3 SV=1
Length = 200
Score = 32.3 bits (72), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 15/74 (20%)
Query: 179 SAASAHSNEPVA----KEHFDFF-------PN--REVVGYGFNGEPGYIDNPMFPYPSIR 225
+ AS HS P A +E FD F P+ R + YGF G P D P Y +R
Sbjct: 98 TVASIHSVHPSANWFEREVFDMFGILFTGHPDLRRILTDYGFRGHPMRKDFPTTGYTEVR 157
Query: 226 FKAITKEL--EPLK 237
+ + K + EP+K
Sbjct: 158 YDEVQKRVVYEPVK 171
>sp|P36290|POLG_CXA24 Genome polyprotein OS=Coxsackievirus A24 (strain EH24/70) PE=3 SV=3
Length = 2214
Score = 32.3 bits (72), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 158 KEVAVSATRALIKPKSLAASYSAASAHSNEPVAKEHFDFFPNREVVGYGFNG-EPGYIDN 216
+ + V AT+ L + +S S P A +FD P + G FN E ID+
Sbjct: 332 RNITVPATQGLPTMLTPGSSQFLTSDDFQSPCALPNFDVTPPIHIPGEVFNMMELAEIDS 391
Query: 217 PMFPYPSIRFKAITKELEPLKQKEKG 242
M P S+ KA T E+ P+ +KG
Sbjct: 392 -MIPMNSVTGKANTMEMYPIPLDDKG 416
>sp|P11066|OTC_ASPNG Ornithine carbamoyltransferase, mitochondrial OS=Aspergillus niger
GN=argB PE=2 SV=1
Length = 370
Score = 32.3 bits (72), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 83/209 (39%), Gaps = 27/209 (12%)
Query: 11 RALIKPKSLAASYSAASAHSNEP---PLKQKEKGDWKNLTLEEKKTLYR-ASFAQTFVEM 66
RA P +L YS+ S + P P + +LT E TL R AS + ++
Sbjct: 14 RAFHNPPALRRLYSSTSHSAATPATSPFAPRHLLSIADLTPTEFATLVRNASSHKRAIKS 73
Query: 67 NASTGEWKGAFGIAFMVVTVSLLTYVLMYKVGIDEARRQHESFVALLRD----LGLDVIE 122
+ GA S T +M+ R E V + LG D I+
Sbjct: 74 GSIPQSLHGAL---------SGKTVAMMFSKRSTRTRISTEGAVVQMGGHPMFLGKDDIQ 124
Query: 123 LPPDEDLPESVFIEDTAVIVNGIV--LITKPGNTQRHKEVAVSATRALIKPKSLAASYSA 180
L +E L DTAV+V+ +V ++ + G ++A +T+ +I +L SY
Sbjct: 125 LGVNESL------YDTAVVVSSMVECIVARVGKHADVADLAKHSTKPVIN--ALCDSYHP 176
Query: 181 ASAHSNEPVAKEHFDFFPNREVVGYGFNG 209
A ++ EHF ++ G G NG
Sbjct: 177 LQAIADFQTISEHFAASGKGKLEGLGLNG 205
>sp|O34497|YKGA_BACSU Uncharacterized protein YkgA OS=Bacillus subtilis (strain 168)
GN=ykgA PE=3 SV=2
Length = 286
Score = 32.0 bits (71), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 97 VGIDEARRQHESFVALLRDLGLDVIELPPDEDLPESVFIEDTAVIV 142
+ + A QH V LR ++V+ LP + LPE VF D ++
Sbjct: 50 IHVKTANDQHSRLVEALRSHNVEVVLLPVRDGLPEQVFTRDIGFVI 95
>sp|B4RCM7|NUOC_PHEZH NADH-quinone oxidoreductase subunit C OS=Phenylobacterium zucineum
(strain HLK1) GN=nuoC PE=3 SV=1
Length = 209
Score = 31.6 bits (70), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 194 FDFFPN--REVVGYGFNGEPGYIDNPMFPYPSIRFKAITKEL--EPLKQKEKGDWKNLT 248
FD P+ R + YGF+G P D PM Y +R+ K + EP+K E +W L+
Sbjct: 127 FDGHPDLRRILTDYGFHGHPLRKDFPMTGYVEVRYDDELKRVVYEPVKSVEWRNWDFLS 185
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 124,223,937
Number of Sequences: 539616
Number of extensions: 5146183
Number of successful extensions: 14772
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 14693
Number of HSP's gapped (non-prelim): 78
length of query: 344
length of database: 191,569,459
effective HSP length: 118
effective length of query: 226
effective length of database: 127,894,771
effective search space: 28904218246
effective search space used: 28904218246
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)