Query psy9472
Match_columns 647
No_of_seqs 379 out of 4474
Neff 10.6
Searched_HMMs 29240
Date Fri Aug 16 20:17:36 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9472.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9472hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 100.0 1.5E-41 5.1E-46 362.4 17.4 298 299-608 28-488 (510)
2 2ks9_A Substance-P receptor; w 100.0 7.4E-39 2.5E-43 327.7 19.9 292 301-609 30-324 (364)
3 2rh1_A Beta-2-adrenergic recep 100.0 3.5E-39 1.2E-43 343.8 13.1 290 301-608 38-478 (500)
4 1u19_A Rhodopsin; G protein-co 100.0 1.1E-37 3.8E-42 317.1 18.5 291 299-608 34-325 (349)
5 3vw7_A Proteinase-activated re 100.0 8.4E-38 2.9E-42 332.9 15.9 298 300-610 17-468 (484)
6 3v2y_A Sphingosine 1-phosphate 100.0 7E-38 2.4E-42 335.1 13.5 284 302-609 62-495 (520)
7 3odu_A C-X-C chemokine recepto 100.0 1.3E-37 4.4E-42 333.1 11.4 293 299-610 44-496 (502)
8 3eml_A Human adenosine A2A rec 100.0 7.9E-38 2.7E-42 333.6 9.0 297 301-608 19-468 (488)
9 4ea3_A Fusion protein of nocic 100.0 5.6E-37 1.9E-41 321.0 13.8 290 300-610 122-413 (434)
10 3uon_A Human M2 muscarinic ace 100.0 1.7E-37 5.8E-42 329.0 9.9 291 301-610 21-461 (467)
11 4dkl_A MU-type opioid receptor 100.0 9.7E-38 3.3E-42 330.6 6.4 291 301-607 15-456 (464)
12 2lnl_A C-X-C chemokine recepto 100.0 1.9E-36 6.6E-41 300.1 15.1 279 299-607 7-294 (296)
13 4eiy_A Adenosine receptor A2A/ 100.0 5E-38 1.7E-42 331.1 0.2 300 299-609 27-428 (447)
14 3pbl_A D(3) dopamine receptor, 100.0 1.3E-36 4.4E-41 323.5 10.6 287 301-610 36-475 (481)
15 3rze_A Histamine H1 receptor, 100.0 1.6E-36 5.4E-41 320.2 8.3 290 302-610 7-446 (452)
16 4amj_A Beta-1 adrenergic recep 100.0 2.6E-36 8.8E-41 302.3 8.9 292 300-608 8-302 (315)
17 2z73_A Rhodopsin; visual pigme 100.0 5.6E-35 1.9E-39 307.5 15.4 289 301-605 32-330 (448)
18 3sn6_R Lysozyme, beta-2 adrene 100.0 1.9E-35 6.6E-40 316.3 8.1 290 302-608 181-492 (514)
19 4grv_A Neurotensin receptor ty 100.0 3.1E-29 1.1E-33 267.2 9.2 207 1-217 131-490 (510)
20 3vw7_A Proteinase-activated re 99.9 1.4E-27 4.7E-32 254.0 10.5 210 1-221 114-472 (484)
21 2ks9_A Substance-P receptor; w 99.9 7.7E-26 2.6E-30 231.0 18.9 201 1-218 126-326 (364)
22 1u19_A Rhodopsin; G protein-co 99.9 1.2E-25 4.3E-30 228.0 16.7 198 1-219 132-329 (349)
23 2rh1_A Beta-2-adrenergic recep 99.9 2.4E-26 8.4E-31 244.6 9.6 199 1-218 134-481 (500)
24 3eml_A Human adenosine A2A rec 99.9 7.9E-26 2.7E-30 240.7 10.9 209 1-220 113-473 (488)
25 4amj_A Beta-1 adrenergic recep 99.9 1.6E-25 5.3E-30 223.8 10.0 200 1-219 105-306 (315)
26 4ea3_A Fusion protein of nocic 99.9 1.1E-24 3.9E-29 227.6 14.4 198 1-219 218-415 (434)
27 4eiy_A Adenosine receptor A2A/ 99.9 4.4E-26 1.5E-30 239.8 3.1 209 1-220 123-432 (447)
28 3uon_A Human M2 muscarinic ace 99.9 2.8E-25 9.4E-30 235.1 9.2 198 1-219 117-463 (467)
29 2lnl_A C-X-C chemokine recepto 99.9 1.6E-24 5.4E-29 214.3 13.6 189 1-215 103-295 (296)
30 3odu_A C-X-C chemokine recepto 99.9 1.1E-25 3.9E-30 240.4 5.5 204 1-219 140-498 (502)
31 3v2y_A Sphingosine 1-phosphate 99.9 1.7E-24 5.9E-29 231.3 14.4 195 1-220 156-499 (520)
32 3rze_A Histamine H1 receptor, 99.9 2.3E-24 7.8E-29 227.0 14.0 198 1-219 102-448 (452)
33 2z73_A Rhodopsin; visual pigme 99.9 2.9E-24 1E-28 225.7 14.6 195 1-213 129-331 (448)
34 4dkl_A MU-type opioid receptor 99.9 1.1E-24 3.7E-29 230.3 11.1 199 1-215 110-457 (464)
35 3pbl_A D(3) dopamine receptor, 99.9 2.6E-24 8.8E-29 228.5 12.0 194 1-219 133-477 (481)
36 3sn6_R Lysozyme, beta-2 adrene 99.9 3E-24 1E-28 229.5 6.1 199 1-218 276-495 (514)
37 2koe_A Human cannabinoid recep 98.5 1.7E-08 5.9E-13 64.6 0.1 37 179-215 3-39 (40)
38 1hll_A Alpha-2A adrenergic rec 98.2 3.8E-07 1.3E-11 54.8 0.8 30 389-423 2-31 (32)
39 2ki9_A Cannabinoid receptor 2; 98.0 8.1E-07 2.8E-11 53.6 -0.4 29 133-161 1-29 (33)
40 2ki9_A Cannabinoid receptor 2; 97.8 2.7E-06 9.4E-11 51.2 0.2 30 529-558 1-30 (33)
41 1hll_A Alpha-2A adrenergic rec 97.3 1.7E-05 5.8E-10 47.4 -1.5 22 1-27 10-31 (32)
42 2koe_A Human cannabinoid recep 96.8 0.00019 6.3E-09 45.4 0.2 33 573-607 5-38 (40)
43 2lot_A Apelin receptor; membra 96.3 0.00067 2.3E-08 47.0 0.1 31 305-335 30-60 (64)
44 2rdd_B UPF0092 membrane protei 26.1 23 0.0008 21.1 1.0 20 95-114 6-26 (37)
45 2ket_A Cathelicidin-6; antimic 24.4 40 0.0014 17.4 1.5 12 202-213 4-15 (27)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=100.00 E-value=1.5e-41 Score=362.38 Aligned_cols=298 Identities=19% Similarity=0.293 Sum_probs=226.9
Q ss_pred hhhhhHhHHHHHHHHHHHHHHhhHHhhhhhhhcCCCC---CCccchhhHHHHHHHHHHhhcccceeeeee--eccccccc
Q psy9472 299 ERLETYLVPIVFAFIFVVGVLGNGTLVLIFINHKSMR---NVPNIYILSLALGDLLVILTCVPFTSTVYT--FESWPYGE 373 (647)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~g~~~N~~vl~~i~~~~~l~---~~~~~~l~~Lav~Dll~~~~~~~~~~~~~~--~~~~~~~~ 373 (647)
+.....++.++|.+++++|++||+++++++.+++++| +++|+|++|||++|++.+++.+|+.+.... .+.|.+|+
T Consensus 28 ~~~~~v~~~~~~~~i~~~g~~gN~lvi~~i~~~~~~r~~~~~~n~~i~~La~aDll~~~~~~p~~~~~~~~~~~~w~~g~ 107 (510)
T 4grv_A 28 DIYSKVLVTAIYLALFVVGTVGNSVTLFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAFGD 107 (510)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSCSSHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhheeeecCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEhhH
Confidence 3445678888999999999999999999998887655 678999999999999999999998776543 35699999
Q ss_pred cccccchhhhhhhHHHHHHHHHHHHHhhhheeeccccccccCCCcccccchhhhhhHHHHHHHHHhhhccchheeeeeee
Q psy9472 374 SICKISESTKDISVGVSVFTLTALSADRFFAIVDPLRKLHSGIGGKRATRCTILIVAAIWIFAILCAIPSMTLSYVRAFK 453 (647)
Q Consensus 374 ~~C~~~~~~~~~~~~~s~~~l~~ia~dRy~~i~~P~~~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~ 453 (647)
..|++..++..++..+|++++++||+|||+||++|++ |+...+++++..+++++|++++++++|+++.+......
T Consensus 108 ~~C~~~~~~~~~~~~~S~~~l~~is~dRy~ai~~P~~-----~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~ 182 (510)
T 4grv_A 108 AGCRGYYFLRDACTYATALNVASLSVARYLAICHPFK-----AKTLMSRSRTKKFISAIWLASALLAIPMLFTMGLQNRS 182 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCC-----CCCCCCCSCCHHHHHHHHHHHHHHHTTHHHHEEEEECS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHheEEEecccc-----ccccccccccceeehHHHHHHHHHHHHHHHhhcccccc
Confidence 9999999999999999999999999999999999999 88899999999999999999999999998887665543
Q ss_pred cCCCCCceeeeeecCCCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC----------------
Q psy9472 454 DDTNNNTLFESCYPFPPIDGYPNYPRTVIIMRFLIYYAVPLLIIACFYSLMARSLILSTKNMPG---------------- 517 (647)
Q Consensus 454 ~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~---------------- 517 (647)
.+. .......|.+..+. .....+..+.+++.|++|+++|+++|.+|+++++++.+....
T Consensus 183 ~~~-~~~~~~~c~~~~~~----~~~~~~~~~~~~~~f~iP~~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (510)
T 4grv_A 183 ADG-THPGGLVCTPIVDT----ATVKVVIQVNTFMSFLFPMLVISILNTVIANKLTVMVNIFEMLRIDEGLRLKIYKDTE 257 (510)
T ss_dssp SSS-CCGGGEEEEECSCH----HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTSCTHHHHHHHHTCCEEEEEECTT
T ss_pred cCC-CCCCcccccccccc----chhhhhhhhhhhHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccc
Confidence 322 22334567654432 234566677778889999999999999999999865321000
Q ss_pred --------------------------------------------------------------------------------
Q psy9472 518 -------------------------------------------------------------------------------- 517 (647)
Q Consensus 518 -------------------------------------------------------------------------------- 517 (647)
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 337 (510)
T 4grv_A 258 GYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINM 337 (510)
T ss_dssp SCEEEETTEECCCSSSHHHHHHSCCC---CCCTTBCCHHHHHHHHHHHHHHHHHHHHHCTTTHHHHHHSCSHHHHHHHHH
T ss_pred cccccccccccCCCCCCCccccccCcCCCCCCCCcccCCccccccCCCCcccccccccCCCCCCCcCccccccccccCCc
Confidence
Q ss_pred -------------------------------------------------------cccchhhhhHhhhhhhHHHHHHHHH
Q psy9472 518 -------------------------------------------------------ELQGQTRQIRARKKVAKTVLTFVVV 542 (647)
Q Consensus 518 -------------------------------------------------------~~~~~~~~~~~~~k~~~~~~~i~~~ 542 (647)
......+..++++|++||+++|+++
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~erk~~k~L~iVv~~ 417 (510)
T 4grv_A 338 VFQMGETGVAGFTNSLRMLNNKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGSGSVQALRHGVLVARAVVIA 417 (510)
T ss_dssp HHHHHHHHHTTCHHHHHHHTTTCHHHHHHHHHSSCSCCSSHHHHHHHHHHHHHSSSGGGTTSTTTHHHHHHHHHHHHHHH
T ss_pred cccCCCCCCCCCCccccccccCCCcccccccccccccccCCccccccccccccccchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 0000011224678999999999999
Q ss_pred HhhccccHHHHHHHHHhCCCCCCCchh------HHHHHHHHhhhhhccC-chhHHhhcCCccccccccccCCC
Q psy9472 543 FAMCFFPQHFFFLWFYINPTAPDDYND------FWHILRIMSSKIINSR-NANARRFHRPSTYSSTRKWDSVS 608 (647)
Q Consensus 543 f~~~w~P~~i~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ns~-NPiI~~fr~~~~~~~~~~~~~~~ 608 (647)
|++||+||+++.++..+.+........ ...+..++++ +||| ||+||.|.++.||+.+++.++|+
T Consensus 418 F~iCWlPf~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~Y--~NS~iNPiIY~~~n~~FR~aFk~iL~C~ 488 (510)
T 4grv_A 418 FVVCWLPYHVRRLMFCYISDEQWTTFLFDFYHYFYMLTNALAY--ASSAINPILYNLVSANFRQVFLSTLACL 488 (510)
T ss_dssp HHHHHHHHHHHHHHHHTTTTTCCCHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHSCCCCC--------
T ss_pred HHHHHHHHHHHHHHHHHcCcccCChhHHHHHHHHHHHHHHHHH--HHHHHHHHHHHhcCHHHHHHHHHHHhhc
Confidence 999999999999998887654433211 2233445566 9999 99999998888888877766543
No 2
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=100.00 E-value=7.4e-39 Score=327.72 Aligned_cols=292 Identities=24% Similarity=0.367 Sum_probs=231.1
Q ss_pred hhhHhHHHHHHHHHHHHHHhhHHhhhhhhhcCCCCCCccchhhHHHHHHHHHHhhcccceeeeeeeccccccccccccch
Q psy9472 301 LETYLVPIVFAFIFVVGVLGNGTLVLIFINHKSMRNVPNIYILSLALGDLLVILTCVPFTSTVYTFESWPYGESICKISE 380 (647)
Q Consensus 301 ~~~~~~~~~~~~~~~~g~~~N~~vl~~i~~~~~l~~~~~~~l~~Lav~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~~ 380 (647)
....+..+++.+++++|++||+++++++.+++++|++.|++++|||++|++.+++.+|..+.....+.|..++..|++..
T Consensus 30 ~~~~~~~~~~~~i~~~gi~gN~lvi~vi~~~~~l~~~~~~~l~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~ 109 (364)
T 2ks9_A 30 WQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHN 109 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSCSSCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhHH
Confidence 34456688899999999999999999999999999999999999999999998888888776666678999999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHhhhheeeccccccccCCCcccccchhhhhhHHHHHHHHHhhhccchheeeeeeecCCCCCc
Q psy9472 381 STKDISVGVSVFTLTALSADRFFAIVDPLRKLHSGIGGKRATRCTILIVAAIWIFAILCAIPSMTLSYVRAFKDDTNNNT 460 (647)
Q Consensus 381 ~~~~~~~~~s~~~l~~ia~dRy~~i~~P~~~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (647)
++..++..+|++++++||+|||++|++|++ |+ .++++....++++|++++++++|.+........ .
T Consensus 110 ~~~~~~~~~s~~~l~~isidRy~aI~~P~~-----~~--~~~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~-------~ 175 (364)
T 2ks9_A 110 FFPIAAVFASIYSMTAVAFDRYMAIIHPLQ-----PR--LSATATKVVICVIWVLALLLAFPQGYYSTTETM-------P 175 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCCCT-----TS--CCHHHHHHHHHHHHHHHHHHHTTTTTTSCCCBC-------T
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-----cc--cccchHHHHHHHHHHHHHHHHhHHHHHhhheec-------C
Confidence 999999999999999999999999999999 54 578888899999999999999988654332211 1
Q ss_pred eeeeeecCCCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccchhhhhHhhhhhhHHHHHHH
Q psy9472 461 LFESCYPFPPIDGYPNYPRTVIIMRFLIYYAVPLLIIACFYSLMARSLILSTKNMPGELQGQTRQIRARKKVAKTVLTFV 540 (647)
Q Consensus 461 ~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~i~ 540 (647)
....|...........+...|.+...++.+++|+++++++|..|+++++++++..... ...+++.++++|++|++++++
T Consensus 176 ~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~ii~~~y~~i~~~l~~~~~~~~~~-~~~~~~~~~~~k~~~~~~~v~ 254 (364)
T 2ks9_A 176 SRVVCMIEWPEHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDSS-DRYHEQVSAKRKVVKMMIVVV 254 (364)
T ss_dssp TCSSBCCCCSCCCTTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSCSCCCSSSSS-SCSSHHHHHHHHHHHHHHHHH
T ss_pred CCCEEeecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc-hhhhhhHHhhhhHHHHHHHHH
Confidence 2235765544433334456677777888899999999999999999998755433222 223345577889999999999
Q ss_pred HHHhhccccHHHHHHHHHhCCCCCCC--chhHHHHHHHHhhhhhccC-chhHHhhcCCccccccccccCCCC
Q psy9472 541 VVFAMCFFPQHFFFLWFYINPTAPDD--YNDFWHILRIMSSKIINSR-NANARRFHRPSTYSSTRKWDSVST 609 (647)
Q Consensus 541 ~~f~~~w~P~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ns~-NPiI~~fr~~~~~~~~~~~~~~~~ 609 (647)
++|++||+|+.+..++..+.+..... ..........+.+ +|++ ||+||.++++.+|...++.++++.
T Consensus 255 ~~f~~~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~ns~~NPiiY~~~~~~fR~~~~~~~~~~~ 324 (364)
T 2ks9_A 255 CTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAM--SSTMYNPIIYCCLNDRFRLGFKHAFRCCP 324 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTSCSSSCCHHHHHHHHHHHH--HHHHHHHHHHHHHCHHHHHHHHHHHSSSC
T ss_pred HHHHHHHHHHHHHHHHHHhCcccchhHHHHHHHHHHHHHHH--HHHHHHHHHHHHHhHHHHHHHHHHHhhcC
Confidence 99999999999999988876543221 2223333444455 9999 999999988888887777665543
No 3
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=100.00 E-value=3.5e-39 Score=343.80 Aligned_cols=290 Identities=20% Similarity=0.300 Sum_probs=227.4
Q ss_pred hhhHhHHHHHHHHHHHHHHhhHHhhhhhhhcCCCCCCccchhhHHHHHHHHHHhhcccceeeeeeeccccccccccccch
Q psy9472 301 LETYLVPIVFAFIFVVGVLGNGTLVLIFINHKSMRNVPNIYILSLALGDLLVILTCVPFTSTVYTFESWPYGESICKISE 380 (647)
Q Consensus 301 ~~~~~~~~~~~~~~~~g~~~N~~vl~~i~~~~~l~~~~~~~l~~Lav~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~~ 380 (647)
....+..+++.+++++|++||+++++++.+++++|+++|+|++|||++|++.+++.+|+.+.....+.|.+|...|++..
T Consensus 38 ~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~~l~nLAiaDll~~~~~~p~~~~~~~~~~w~~~~~~C~~~~ 117 (500)
T 2rh1_A 38 VWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEFWT 117 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCcchhhHHH
Confidence 34466788999999999999999999999999999999999999999999999988998887777788999999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHhhhheeeccccccccCCCcccccchhhhhhHHHHHHHHHhhhccch-heeeeeeecCCCCC
Q psy9472 381 STKDISVGVSVFTLTALSADRFFAIVDPLRKLHSGIGGKRATRCTILIVAAIWIFAILCAIPSMT-LSYVRAFKDDTNNN 459 (647)
Q Consensus 381 ~~~~~~~~~s~~~l~~ia~dRy~~i~~P~~~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~-~~~~~~~~~~~~~~ 459 (647)
++..++..+|++++++||+|||++|++|++ |+...+++++..+++++|++++++++++++ .+.... .
T Consensus 118 ~~~~~~~~~Si~~l~~isidRy~aI~~Pl~-----~~~~~t~~~~~~~i~~~W~~s~~~~~~p~~~~~~~~~-------~ 185 (500)
T 2rh1_A 118 SIDVLCVTASIETLCVIAVDRYFAITSPFK-----YQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRAT-------H 185 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSSST-----TSCSSCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCC-------S
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHeeccCc-----CCeeecccceeehhhHHHHHHHHHHhcchheeeeccc-------c
Confidence 999999999999999999999999999999 888899999999999999999999864443 322111 1
Q ss_pred ceeeeeecCCCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-----CC------------Cc----
Q psy9472 460 TLFESCYPFPPIDGYPNYPRTVIIMRFLIYYAVPLLIIACFYSLMARSLILSTKN-----MP------------GE---- 518 (647)
Q Consensus 460 ~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~-----~~------------~~---- 518 (647)
.....|........ ......|.++..++.+++|+++|+++|.+|++.++++.++ .. +.
T Consensus 186 ~~~~~c~~~~~~~~-~~~~~~y~~~~~~~~~~iPl~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (500)
T 2rh1_A 186 QEAINCYAEETCCD-FFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLNIFEMLRIDEGLRLKIYKDTEGYYTIG 264 (500)
T ss_dssp HHHHHHHHCTTCCC-CCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHTCCEEEEEECTTSCEEEE
T ss_pred cCcceecccccccc-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccccccCCC
Confidence 11123443221111 2234567777788889999999999999999999987654 00 00
Q ss_pred ----------------------------------------cc--------------------------------------
Q psy9472 519 ----------------------------------------LQ-------------------------------------- 520 (647)
Q Consensus 519 ----------------------------------------~~-------------------------------------- 520 (647)
+.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (500)
T 2rh1_A 265 IGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGE 344 (500)
T ss_dssp TTEEEESCSCHHHHHHHHHHHHTSCCTTBCCHHHHHHHHHHHHHHHHHHHHHCTTTHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCcccccccccccccccCCCCCCccchhhhhhcccCCccccccccccCCCCCCCCCcccccccchhhcccCCCCc
Confidence 00
Q ss_pred --------------------------------------------------chhhhhHhhhhhhHHHHHHHHHHhhccccH
Q psy9472 521 --------------------------------------------------GQTRQIRARKKVAKTVLTFVVVFAMCFFPQ 550 (647)
Q Consensus 521 --------------------------------------------------~~~~~~~~~~k~~~~~~~i~~~f~~~w~P~ 550 (647)
...+..++|+|++|++++++++|++||+|+
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ka~ktl~ivv~~F~icWlP~ 424 (500)
T 2rh1_A 345 TGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYKFCLKEHKALKTLGIIMGTFTLCWLPF 424 (500)
T ss_dssp HHHHTCHHHHHHHHTTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHSSSGGGTTCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccCchhhhhcccccccccccccccccCCCCcccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000001367899999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCchhHHHHHHHHhhhhhccC-chhHHhhcCCccccccccccCCC
Q psy9472 551 HFFFLWFYINPTAPDDYNDFWHILRIMSSKIINSR-NANARRFHRPSTYSSTRKWDSVS 608 (647)
Q Consensus 551 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ns~-NPiI~~fr~~~~~~~~~~~~~~~ 608 (647)
.++.++..+.... .....+.+..++++ +||+ ||+||.| ++.+|...++.++++
T Consensus 425 ~i~~l~~~~~~~~--~~~~~~~~~~~L~y--~NS~iNPiIY~~-n~~FR~af~~il~~~ 478 (500)
T 2rh1_A 425 FIVNIVHVIQDNL--IRKEVYILLNWIGY--VNSGFNPLIYCR-SPDFRIAFQELLCLR 478 (500)
T ss_dssp HHHHHHHHHSTTS--SCHHHHHHHHHHHH--HGGGTHHHHGGG-SHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHcCCc--ccHHHHHHHHHHHH--HHHhhcchhhhc-cHHHHHHHHHHHhhh
Confidence 9999999887432 23344556667777 9999 9999986 777777777766443
No 4
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=100.00 E-value=1.1e-37 Score=317.07 Aligned_cols=291 Identities=16% Similarity=0.246 Sum_probs=233.3
Q ss_pred hhhhhHhHHHHHHHHHHHHHHhhHHhhhhhhhcCCCCCCccchhhHHHHHHHHHHhhcccceeeeeeecccccccccccc
Q psy9472 299 ERLETYLVPIVFAFIFVVGVLGNGTLVLIFINHKSMRNVPNIYILSLALGDLLVILTCVPFTSTVYTFESWPYGESICKI 378 (647)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~g~~~N~~vl~~i~~~~~l~~~~~~~l~~Lav~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~ 378 (647)
++....+..+++.+++++|++||+++++++.+++++|++.|++++|||++|++.++...|..+.....+.|..++..|++
T Consensus 34 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~Lai~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~ 113 (349)
T 1u19_A 34 EPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNL 113 (349)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCTTHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhHHheEeehhhhhhhcCchhHHHHHHHHHHHHHHHhcchHHHHHHhcCeeeCChhHHHH
Confidence 45566788889999999999999999999999999999999999999999999999888887766666789999999999
Q ss_pred chhhhhhhHHHHHHHHHHHHHhhhheeeccccccccCCCcccccchhhhhhHHHHHHHHHhhhccchheeeeeeecCCCC
Q psy9472 379 SESTKDISVGVSVFTLTALSADRFFAIVDPLRKLHSGIGGKRATRCTILIVAAIWIFAILCAIPSMTLSYVRAFKDDTNN 458 (647)
Q Consensus 379 ~~~~~~~~~~~s~~~l~~ia~dRy~~i~~P~~~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (647)
..++..++..+|++++++||+|||++|++|++ |+. .+++++...++++|++++++++|+++++........
T Consensus 114 ~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~-----~~~-~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~--- 184 (349)
T 1u19_A 114 EGFFATLGGEIALWSLVVLAIERYVVVCKPMS-----NFR-FGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGM--- 184 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSS-----SCC-CCHHHHHHHHHHHHHHHHHHHSGGGTTSSCCEEETT---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHheeeCCcc-----cee-eccchhHHHHHHHHHHHHHHHHHHHHheeeeeccCC---
Confidence 99999999999999999999999999999999 655 688999999999999999999998876543322211
Q ss_pred CceeeeeecCCCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccchhhhhHhhhhhhHHHHH
Q psy9472 459 NTLFESCYPFPPIDGYPNYPRTVIIMRFLIYYAVPLLIIACFYSLMARSLILSTKNMPGELQGQTRQIRARKKVAKTVLT 538 (647)
Q Consensus 459 ~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 538 (647)
...|...............+.....++.+++|+++++++|.+|+++++++.++... +.+..++++|.+++++.
T Consensus 185 ---~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~ 257 (349)
T 1u19_A 185 ---QCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQE----SATTQKAEKEVTRMVII 257 (349)
T ss_dssp ---TTEEECCCSCCCGGGTHHHHHHHHHHHTTHHHHHHHHHHHTTTTTSSCSCCCSSCS----SSHHHHHHHHHHHHHHH
T ss_pred ---ceeecccccCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcc----chhhHHHHHHHHHHHHH
Confidence 23676544332222234566677777889999999999999999999876553322 23344677899999999
Q ss_pred HHHHHhhccccHHHHHHHHHhCCCCCCCchhHHHHHHHHhhhhhccC-chhHHhhcCCccccccccccCCC
Q psy9472 539 FVVVFAMCFFPQHFFFLWFYINPTAPDDYNDFWHILRIMSSKIINSR-NANARRFHRPSTYSSTRKWDSVS 608 (647)
Q Consensus 539 i~~~f~~~w~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ns~-NPiI~~fr~~~~~~~~~~~~~~~ 608 (647)
++++|++||+|+.+..++..+....... .........+.. +|++ ||+||.++++.+|...++.+++.
T Consensus 258 i~~~f~i~~~P~~i~~~~~~~~~~~~~~-~~~~~~~~~l~~--~ns~~nPiiY~~~~~~fR~~~~~~~~c~ 325 (349)
T 1u19_A 258 MVIAFLICWLPYAGVAFYIFTHQGSDFG-PIFMTIPAFFAK--TSAVYNPVIYIMMNKQFRNCMVTTLCCG 325 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTSCCC-HHHHHHHHHHGG--GGGTHHHHHHHHTCHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHHHHhHhheecCCcccc-hHHHHHHHHHHH--HHHHHhHHHHHHHhHHHHHHHHHHhccc
Confidence 9999999999999998887776443322 223333444444 9999 99999999888888877766543
No 5
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=100.00 E-value=8.4e-38 Score=332.90 Aligned_cols=298 Identities=19% Similarity=0.282 Sum_probs=220.3
Q ss_pred hhhhHhHHHHHHHHHHHHHHhhHHhhhhhhhcCCCCCCccchhhHHHHHHHHHHhhcccceeeeee-ecccccccccccc
Q psy9472 300 RLETYLVPIVFAFIFVVGVLGNGTLVLIFINHKSMRNVPNIYILSLALGDLLVILTCVPFTSTVYT-FESWPYGESICKI 378 (647)
Q Consensus 300 ~~~~~~~~~~~~~~~~~g~~~N~~vl~~i~~~~~l~~~~~~~l~~Lav~Dll~~~~~~~~~~~~~~-~~~~~~~~~~C~~ 378 (647)
.....++.+++.+++++|++||+++++++.+++++++++|+|++|||++|++.++. +|+...... .+.|.++...|++
T Consensus 17 ~~~~~~~~~~~~~i~~~~i~gN~lvi~~~~~~~~l~~~~~~~l~~La~aDll~~~~-~~~~~~~~~~~~~~~~~~~~C~~ 95 (484)
T 3vw7_A 17 SWLTLFVPSVYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVSV-LPFKISYYFSGSDWQFGSELCRF 95 (484)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHTT-HHHHHHHHHTTSCCCSCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCcccchhHHhH
Confidence 34556888999999999999999999999999999999999999999999999655 555444333 3479999999999
Q ss_pred chhhhhhhHHHHHHHHHHHHHhhhheeeccccccccCCCcccccchhhhhhHHHHHHHHHhhhccchheeeeeeecCCCC
Q psy9472 379 SESTKDISVGVSVFTLTALSADRFFAIVDPLRKLHSGIGGKRATRCTILIVAAIWIFAILCAIPSMTLSYVRAFKDDTNN 458 (647)
Q Consensus 379 ~~~~~~~~~~~s~~~l~~ia~dRy~~i~~P~~~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (647)
..++..++..+|++++++||+|||++|++|++ |+...+++++..+++++|++++++++|+++.........
T Consensus 96 ~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~-----~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~---- 166 (484)
T 3vw7_A 96 VTAAFYCNMYASILLMTVISIDRFLAVVYPMQ-----SLSWRTLGRASFTCLAIWALAIAGVVPLLLKEQTIQVPG---- 166 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC----------CCHHHHHHHHHHHHHHHHHHHHHHHTSCCEEEETT----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHheEEEcccc-----cccccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCC----
Confidence 99999999999999999999999999999999 888899999999999999999999999988766544321
Q ss_pred CceeeeeecCCCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC--------------c------
Q psy9472 459 NTLFESCYPFPPIDGYPNYPRTVIIMRFLIYYAVPLLIIACFYSLMARSLILSTKNMPG--------------E------ 518 (647)
Q Consensus 459 ~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~--------------~------ 518 (647)
.....|...........+...|.++..++.+++|+++|+++|..|++.++++.+.... .
T Consensus 167 -~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ti 245 (484)
T 3vw7_A 167 -LGITTCHDVLSETLLEGYYAYYFSAFSAVFFFVPLIISTVCYVSIIRCLSSSANIFEMLRIDEGLRLKIYKNTEGYYTI 245 (484)
T ss_dssp -TTEEEESSSCSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHCCEEEEEECTTSCEEE
T ss_pred -CCCceeeccCCccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhHhhHHHHhhhhccchhhhhccccccceee
Confidence 2235787655544333344446667778889999999999999999999887641000 0
Q ss_pred --------------------------------------------------------------------------------
Q psy9472 519 -------------------------------------------------------------------------------- 518 (647)
Q Consensus 519 -------------------------------------------------------------------------------- 518 (647)
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 325 (484)
T 3vw7_A 246 GIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMG 325 (484)
T ss_dssp ETTEEEESSSCHHHHHHHHHHHHTSCCSSBCCHHHHHHHHHHHHHHHHHHHHTCTTTHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred eccccccCCcchhcccccccccccccCCCCCCcccccccccccccccccccccccccCcccccccccccchhhccccccC
Confidence
Q ss_pred -------------------------------------------------ccchhhhhHhhhhhhHHHHHHHHHHhhcccc
Q psy9472 519 -------------------------------------------------LQGQTRQIRARKKVAKTVLTFVVVFAMCFFP 549 (647)
Q Consensus 519 -------------------------------------------------~~~~~~~~~~~~k~~~~~~~i~~~f~~~w~P 549 (647)
+.....+.++++|++||+++++++|++||+|
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~r~~k~l~~v~~~F~icwlP 405 (484)
T 3vw7_A 326 ETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYANRSKKSRALFLSAAVFCIFIICFGP 405 (484)
T ss_dssp HHHHHTTHHHHHHHHTTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHCSSHHHHCHHHHHHHHHHHHHHHHHHHHTTHH
T ss_pred ccccccchhhhhhhhccchhhhhhhhhhhhhhccCcccccCccceeecchhccccchhHHHHHHHHHHHHHHHHHHHhhH
Confidence 0000013356689999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCchh---HHHHHHHHhhhhhccC-chhHHhhcCCccccccccccCCCCC
Q psy9472 550 QHFFFLWFYINPTAPDDYND---FWHILRIMSSKIINSR-NANARRFHRPSTYSSTRKWDSVSTT 610 (647)
Q Consensus 550 ~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ns~-NPiI~~fr~~~~~~~~~~~~~~~~~ 610 (647)
+.++.++..+.......... ...+..++++ +|++ ||+||.++++.+|...++.+++.+.
T Consensus 406 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~--~ns~iNPiIY~~~~~~fR~~~~~ll~~~~~ 468 (484)
T 3vw7_A 406 TNVLLIAHYSFLSHTSTTEAAYFAYLLCVCVSS--ISCCIDPLIYYYASSECQRYVYSILCCKES 468 (484)
T ss_dssp HHHHHHHHHHTCTTCTTSHHHHHHHHHHHHHHT--THHHHHHHHHHHTSSCC-------------
T ss_pred HHHHHHHHHHHhccccchhHHHHHHHHHHHHHH--hccccchHHHHHhhHHHHHHHHHHHhhccC
Confidence 99999998766443333221 2223344444 9999 9999999999999998887655443
No 6
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=100.00 E-value=7e-38 Score=335.10 Aligned_cols=284 Identities=17% Similarity=0.216 Sum_probs=218.9
Q ss_pred hhHhHHHHHHHHHHHHHHhhHHhhhhhhhcCCCCCCccchhhHHHHHHHHHHhhcccceeeeeeeccccccccccccchh
Q psy9472 302 ETYLVPIVFAFIFVVGVLGNGTLVLIFINHKSMRNVPNIYILSLALGDLLVILTCVPFTSTVYTFESWPYGESICKISES 381 (647)
Q Consensus 302 ~~~~~~~~~~~~~~~g~~~N~~vl~~i~~~~~l~~~~~~~l~~Lav~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~ 381 (647)
...+..+++.+++++|++||+++++++.+++++|+++|+|++|||++|++.+++..|..+.. ....|..+...|.+..+
T Consensus 62 ~~~~~~~~~~~i~~~g~~gN~lvi~vi~~~~~lr~~~~~~l~nLA~aDll~~~~~~p~~~~~-~~~~~~~~~~~c~~~~~ 140 (520)
T 3v2y_A 62 SIKLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLS-GATTYKLTPAQWFLREG 140 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGGTTSCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHHHHHc-cccceeeCccccchHHH
Confidence 34678899999999999999999999999999999999999999999999998888876655 45678889999999999
Q ss_pred hhhhhHHHHHHHHHHHHHhhhheeeccccccccCCCcccccchhhhhhHHHHHHHHHhhhccchheeeeeeecCCCCCce
Q psy9472 382 TKDISVGVSVFTLTALSADRFFAIVDPLRKLHSGIGGKRATRCTILIVAAIWIFAILCAIPSMTLSYVRAFKDDTNNNTL 461 (647)
Q Consensus 382 ~~~~~~~~s~~~l~~ia~dRy~~i~~P~~~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (647)
+..++..+|++++++||+|||+||+ |++ |+...+++++..+++++|++++++++|+++++... ..
T Consensus 141 ~~~~~~~~S~~~l~~isidRy~aI~-p~~-----~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~---------~~ 205 (520)
T 3v2y_A 141 SMFVALSASVFSLLAIAIERYITML-KMK-----LHNGSNNFRLFLLISACWVISLILGGLPIMGWNCI---------SA 205 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC-C------------CCHHHHHHHHHHHHHHHHHHHTTTTTCBCT---------TC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhEEe-ccc-----cccccchhHHHHHHHHHHHHHHHHHHHHHHeeccc---------cC
Confidence 9999999999999999999999999 999 88899999999999999999999999988765432 11
Q ss_pred eeeeecCCCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CCCCC-------------c
Q psy9472 462 FESCYPFPPIDGYPNYPRTVIIMRFLIYYAVPLLIIACFYSLMARSLILST----------KNMPG-------------E 518 (647)
Q Consensus 462 ~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~----------~~~~~-------------~ 518 (647)
...|....+ .....|.++ .++.+++|+++|+++|.+|++.++++. .+... .
T Consensus 206 ~~~C~~~~~-----~~~~~~~~~-~~~~~~lPl~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~t~~~g~ 279 (520)
T 3v2y_A 206 LSSCSTVLP-----LYHKHYILF-CTTVFTLLLLSIVILYCRIYSLVRTRNIFEMLRIDEGLRLKIYKDTEGYYTIGIGH 279 (520)
T ss_dssp GGGBCSSST-----TBBHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCSSCEECSSSSEEETTTE
T ss_pred CCcccccCC-----ccchHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhhhhhhccccccceeEeccc
Confidence 236764432 223444433 456799999999999999999999875 00000 0
Q ss_pred c-------------------------------------------------------------------------------
Q psy9472 519 L------------------------------------------------------------------------------- 519 (647)
Q Consensus 519 ~------------------------------------------------------------------------------- 519 (647)
.
T Consensus 280 ~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 359 (520)
T 3v2y_A 280 LLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGV 359 (520)
T ss_dssp ECCSSSCHHHHHHHHHHHHTSCCTTCCCHHHHHHHHHHHHHHHHHHHTTCTTTHHHHHHSCHHHHHHHHHHHHHSCHHHH
T ss_pred ccccccccccccchhhhHHHHhcCCcccHHHhhhHHHhccccccccccccccCCCcCCccchhhhHHHHHHHHccCCCcc
Confidence 0
Q ss_pred ---c--------------------------chhh------------------hhHhhhhhhHHHHHHHHHHhhccccHHH
Q psy9472 520 ---Q--------------------------GQTR------------------QIRARKKVAKTVLTFVVVFAMCFFPQHF 552 (647)
Q Consensus 520 ---~--------------------------~~~~------------------~~~~~~k~~~~~~~i~~~f~~~w~P~~i 552 (647)
. ...+ +.++++|+++|+++++++|++||+|+++
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~r~~r~~~~~~~~~~~~~~~~~~~~~k~~~~~~~vv~~F~vcw~P~~i 439 (520)
T 3v2y_A 360 AGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYASRSSENVALLKTVIIVLSVFIACWAPLFI 439 (520)
T ss_dssp HTCHHHHHHHHTTCHHHHHHHHHHSHHHHHSHHHHHHHHHHHHHCSGGGTCSSTTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccchhhHhhhhhccchhhhcccchhhHHHHhhcchhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0000 0124789999999999999999999999
Q ss_pred HHHHHHhCCCCCCCchhHHHHHHHHhhhhhccC-chhHHhhcCCccccccccccCCCC
Q psy9472 553 FFLWFYINPTAPDDYNDFWHILRIMSSKIINSR-NANARRFHRPSTYSSTRKWDSVST 609 (647)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ns~-NPiI~~fr~~~~~~~~~~~~~~~~ 609 (647)
+.++..+.............+..++++ +|+| ||+||.|+++.+|...++.++++.
T Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~l~~--~ns~~NPiiY~~~~~~fr~~~~~~~~~~~ 495 (520)
T 3v2y_A 440 LLLLDVGCKVKTCDILFRAEYFLVLAV--LNSGTNPIIYTLTNKEMRRAFIRIMGRPL 495 (520)
T ss_dssp HHHHHHTSCTTTCSTTTSCHHHHHHHH--HGGGTHHHHHHHHCHHHHHHHHTTCCSCC
T ss_pred HHHHHHHcccccccHHHHHHHHHHHHH--HHHHHHHHHHHHcCHHHHHHHHHHHHHhc
Confidence 999988876433333333334455666 9999 999999999888888887765543
No 7
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=100.00 E-value=1.3e-37 Score=333.11 Aligned_cols=293 Identities=20% Similarity=0.350 Sum_probs=232.1
Q ss_pred hhhhhHhHHHHHHHHHHHHHHhhHHhhhhhhhcCCCCCCccchhhHHHHHHHHHHhhcccceeeeeeecccccccccccc
Q psy9472 299 ERLETYLVPIVFAFIFVVGVLGNGTLVLIFINHKSMRNVPNIYILSLALGDLLVILTCVPFTSTVYTFESWPYGESICKI 378 (647)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~g~~~N~~vl~~i~~~~~l~~~~~~~l~~Lav~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~ 378 (647)
......+..+++.+++++|++||+++++++.+++++|+++|+|++|||++|++.+ +.+|+.+.... .+|.++...|++
T Consensus 44 ~~~~~~~~~~~~~~i~~~g~~gN~lvi~~~~~~~~l~~~~~~~l~~La~~Dll~~-~~~p~~~~~~~-~~~~~~~~~C~~ 121 (502)
T 3odu_A 44 ANFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFV-ITLPFWAVDAV-ANWYFGNFLCKA 121 (502)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHHH-TTHHHHHHHHH-TCCCSHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHh-cCCcCCchhhhh
Confidence 3456778899999999999999999999999999999999999999999999995 57787665443 479999999999
Q ss_pred chhhhhhhHHHHHHHHHHHHHhhhheeeccccccccCCCcccccchhhhhhHHHHHHHHHhhhccchheeeeeeecCCCC
Q psy9472 379 SESTKDISVGVSVFTLTALSADRFFAIVDPLRKLHSGIGGKRATRCTILIVAAIWIFAILCAIPSMTLSYVRAFKDDTNN 458 (647)
Q Consensus 379 ~~~~~~~~~~~s~~~l~~ia~dRy~~i~~P~~~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (647)
..++..++..+|++++++||+|||++|++|++ |+...+++++..+++++|++++++++|+++.........
T Consensus 122 ~~~~~~~~~~~s~~~l~~is~dRy~ai~~P~~-----~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~---- 192 (502)
T 3odu_A 122 VHVIYTVNLYSSVWILAFISLDRYLAIVHATN-----SQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVSEADD---- 192 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTS-----CHHHHHHHHHTHHHHHTHHHHHHTTHHHHHHEEEEECSS----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhheecccc-----cccccchhHHHHhhhHHHHHHHHHHHHHHHheeeeccCC----
Confidence 99999999999999999999999999999999 888999999999999999999999999988765544322
Q ss_pred CceeeeeecCCCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc-------------------
Q psy9472 459 NTLFESCYPFPPIDGYPNYPRTVIIMRFLIYYAVPLLIIACFYSLMARSLILSTKNMPGEL------------------- 519 (647)
Q Consensus 459 ~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~~~------------------- 519 (647)
...|...... ..+...+.+...++.+++|+++++++|..|+++++++.++.....
T Consensus 193 ---~~~C~~~~~~---~~~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (502)
T 3odu_A 193 ---RYICDRFYPN---DLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSGSNIFEMLRIDEGLRLKIYKDTEGYYT 266 (502)
T ss_dssp ---SEEEEECCSS---HHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHGGGCSCCHHHHHHHHTCCEEEEEECTTSCEE
T ss_pred ---ceEEeecCCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhccccccccCCCccccc
Confidence 2468754433 234556667777888999999999999999999998765421000
Q ss_pred --------------------------------------------------------------------------------
Q psy9472 520 -------------------------------------------------------------------------------- 519 (647)
Q Consensus 520 -------------------------------------------------------------------------------- 519 (647)
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (502)
T 3odu_A 267 IGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM 346 (502)
T ss_dssp EETTEEEECSSCHHHHHHHHHHHHTSCCTTBCCHHHHHHHHHHHHHHHHHHHTTCTTTHHHHHTCCHHHHHHHHHHHHHH
T ss_pred cccccccCcCccccccchhhhcccCcchhhhhhccccccchhhcccccccccccCccccccccCCCCCCcchhhhhhhhh
Confidence
Q ss_pred ----------------------------------------------------cchhhhhHhhhhhhHHHHHHHHHHhhcc
Q psy9472 520 ----------------------------------------------------QGQTRQIRARKKVAKTVLTFVVVFAMCF 547 (647)
Q Consensus 520 ----------------------------------------------------~~~~~~~~~~~k~~~~~~~i~~~f~~~w 547 (647)
...+.+.++++|+++++++++++|++||
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~k~~k~l~~vv~~F~icw 426 (502)
T 3odu_A 347 GETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGSKGHQKRKALKTTVILILAFFACW 426 (502)
T ss_dssp HHHHHHTCHHHHHHHHHTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHCSSHHHHCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhcccCccccchhhhchhhhhccccccccccccCcchhhhccccccccccchhhhhhHhHHHHHHHHHHHHHHHHHHh
Confidence 0000223457899999999999999999
Q ss_pred ccHHHHHHHHHhCCCCCCC----chhHH----HHHHHHhhhhhccC-chhHHhhcCCccccccccccCCCCC
Q psy9472 548 FPQHFFFLWFYINPTAPDD----YNDFW----HILRIMSSKIINSR-NANARRFHRPSTYSSTRKWDSVSTT 610 (647)
Q Consensus 548 ~P~~i~~~~~~~~~~~~~~----~~~~~----~~~~~~~~~~~ns~-NPiI~~fr~~~~~~~~~~~~~~~~~ 610 (647)
+|+.++.++..+....... ..... .+..++.+ +|++ ||+||.++++.+|...++.+++++.
T Consensus 427 ~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~--~ns~~NPiIY~~~~~~fR~~~~~ll~~~~~ 496 (502)
T 3odu_A 427 LPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAF--FHCCLNPILYAFLGAKFKTSAQHALTSGRP 496 (502)
T ss_dssp HHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHHHT--THHHHHHHHTTTTTCCCCCCHHHHHSSCSS
T ss_pred hhHHHHHHHHHHHHHHhhhhccccccchHHHHHHHHHHHH--HhcccchhhhhhcCHHHHHHHHHHhccCCc
Confidence 9999999887764222111 11111 23333444 9999 9999999999999998887755443
No 8
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=100.00 E-value=7.9e-38 Score=333.58 Aligned_cols=297 Identities=19% Similarity=0.216 Sum_probs=230.4
Q ss_pred hhhHhHHHHHHHHHHHHHHhhHHhhhhhhhcCCCCCCccchhhHHHHHHHHHHhhcccceeeeeeeccccccccccccch
Q psy9472 301 LETYLVPIVFAFIFVVGVLGNGTLVLIFINHKSMRNVPNIYILSLALGDLLVILTCVPFTSTVYTFESWPYGESICKISE 380 (647)
Q Consensus 301 ~~~~~~~~~~~~~~~~g~~~N~~vl~~i~~~~~l~~~~~~~l~~Lav~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~~ 380 (647)
....+..+++.+++++|++||+++++++.++++++++.++|++|||++|++.+++.+|+.+... ..|..+...|++..
T Consensus 19 ~~~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~--~~~~~~~~~C~~~~ 96 (488)
T 3eml_A 19 MGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIS--TGFCAACHGCLFIA 96 (488)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSSHHHHHHHHHHHHHHHHHTHHHHHHHHT--TCCEECHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHhhhheeeccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccccccchHHHHHH
Confidence 3456788899999999999999999999999999999999999999999999998888766533 36788889999999
Q ss_pred hhhhhhHHHHHHHHHHHHHhhhheeeccccccccCCCcccccchhhhhhHHHHHHHHHhhhccchheeeeeeecCCCCCc
Q psy9472 381 STKDISVGVSVFTLTALSADRFFAIVDPLRKLHSGIGGKRATRCTILIVAAIWIFAILCAIPSMTLSYVRAFKDDTNNNT 460 (647)
Q Consensus 381 ~~~~~~~~~s~~~l~~ia~dRy~~i~~P~~~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (647)
++..++..+|++++++||+|||++|++|++ |+...+++++..+++++|++++++++|+++++........ ...
T Consensus 97 ~~~~~~~~~s~~~l~~is~dRy~aI~~P~~-----~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~--~~~ 169 (488)
T 3eml_A 97 CFVLVLTQSSIFSLLAIAIDRYIAIRIPLR-----YNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKE--GKN 169 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCGGG-----STTTSCHHHHHHHHHHHHHHHHHHHTTGGGTCCSSCC--------
T ss_pred HHHHHHHHHHHHHHHHHHHHhheeEecccc-----cccccCHHHHHHHHHHHHHHHHHHHHHHHhcccccccccc--ccc
Confidence 999999999999999999999999999999 8889999999999999999999999998876654332211 111
Q ss_pred eeeeeecCCCCC--CCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc-------------------
Q psy9472 461 LFESCYPFPPID--GYPNYPRTVIIMRFLIYYAVPLLIIACFYSLMARSLILSTKNMPGEL------------------- 519 (647)
Q Consensus 461 ~~~~C~~~~~~~--~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~~~------------------- 519 (647)
....|....... ........+.++.+++.+++|+++++++|..|+++++++.++.....
T Consensus 170 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (488)
T 3eml_A 170 HSQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLNIFEMLRIDEGLRLKIYKDTEGYYTI 249 (488)
T ss_dssp -CCSSCTTCEECCHHHHSCHHHHHTTTHHHHTHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHTCCEEEEEECTTSCEEE
T ss_pred cccccccccceeeccccccchhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhccccccchhhccccccceec
Confidence 112343221100 00122334555667888999999999999999999987754321000
Q ss_pred --------------------------------------------------------------------------------
Q psy9472 520 -------------------------------------------------------------------------------- 519 (647)
Q Consensus 520 -------------------------------------------------------------------------------- 519 (647)
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (488)
T 3eml_A 250 GIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMG 329 (488)
T ss_dssp ETTEEEESSSCHHHHHHHHHHHHTSCCTTBCCHHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHSCHHHHHHHHHHHHHHC
T ss_pred cccccCCCCccccccccccccCCCCCCCCCCChhhhccCcccCccccccccCCCCCCCCCcCCcchHHHhhhhccccCCC
Confidence
Q ss_pred ---------------------------------------------------cchhhhhHhhhhhhHHHHHHHHHHhhccc
Q psy9472 520 ---------------------------------------------------QGQTRQIRARKKVAKTVLTFVVVFAMCFF 548 (647)
Q Consensus 520 ---------------------------------------------------~~~~~~~~~~~k~~~~~~~i~~~f~~~w~ 548 (647)
....+..++++|+++++++++++|++||+
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~~iv~~F~icw~ 409 (488)
T 3eml_A 330 ETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYRSTLQKEVHAAKSLAIIVGLFALCWL 409 (488)
T ss_dssp HHHHTTCHHHHHHHHTTCHHHHHHHHTTSHHHHHCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCccCCCCcchhhhhccccccccCcccccCcccccchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 00111246789999999999999999999
Q ss_pred cHHHHHHHHHhCCCCCCCchhHHHHHHHHhhhhhccC-chhHHhhcCCccccccccccCCC
Q psy9472 549 PQHFFFLWFYINPTAPDDYNDFWHILRIMSSKIINSR-NANARRFHRPSTYSSTRKWDSVS 608 (647)
Q Consensus 549 P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ns~-NPiI~~fr~~~~~~~~~~~~~~~ 608 (647)
|+.++.++..+.+...........+..++.+ +|++ ||+||.++++.+|...++.++++
T Consensus 410 P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~--~ns~~NPiIY~~~~~~fR~~~~~l~~~~ 468 (488)
T 3eml_A 410 PLHIINCFTFFCPDCSHAPLWLMYLAIVLSH--TNSVVNPFIYAYRIREFRQTFRKIIRSH 468 (488)
T ss_dssp HHHHHHHHHHHCTTSCCCCHHHHHHHHHHHH--HHHHHHHHHHHHHCHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHhccCccccccHHHHHHHHHHHH--HHhhhchhhhhhcCHHHHHHHHHHHhhc
Confidence 9999999998876554444445555556666 9999 99999998888888777665443
No 9
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=100.00 E-value=5.6e-37 Score=321.01 Aligned_cols=290 Identities=27% Similarity=0.396 Sum_probs=220.4
Q ss_pred hhhhHhHHHHHHHHHHHHHHhhHHhhhhhhhcCCCCCCccchhhHHHHHHHHHHhhcccceeeeeeeccccccccccccc
Q psy9472 300 RLETYLVPIVFAFIFVVGVLGNGTLVLIFINHKSMRNVPNIYILSLALGDLLVILTCVPFTSTVYTFESWPYGESICKIS 379 (647)
Q Consensus 300 ~~~~~~~~~~~~~~~~~g~~~N~~vl~~i~~~~~l~~~~~~~l~~Lav~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 379 (647)
.....+..+++.+++++|++||+++++++.+++++|++.|++++|||++|++. ++.+|+.+.....+.|..+...|++.
T Consensus 122 ~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LAvsDll~-~~~~p~~~~~~~~~~~~~~~~~C~~~ 200 (434)
T 4ea3_A 122 LGLKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLV-LLTLPFQGTDILLGFWPFGNALCKTV 200 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHH-HTTHHHHHHHHHHTSCTTHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHeeeeeeecCccCchhHHHHHHHHHHHHHH-HHHhHHHHHHHHhcCCcCcccHHHHH
Confidence 34566788899999999999999999999999999999999999999999998 66788877777778899999999999
Q ss_pred hhhhhhhHHHHHHHHHHHHHhhhheeeccccccccCCCcccccchhhhhhHHHHHHHHHhhhccchheeeeeeecCCCCC
Q psy9472 380 ESTKDISVGVSVFTLTALSADRFFAIVDPLRKLHSGIGGKRATRCTILIVAAIWIFAILCAIPSMTLSYVRAFKDDTNNN 459 (647)
Q Consensus 380 ~~~~~~~~~~s~~~l~~ia~dRy~~i~~P~~~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (647)
.++..++..+|++++++||+|||++|++|++ |+...+++++..+++++|++++++++|.++........
T Consensus 201 ~~~~~~~~~~S~~~l~~isidRy~aI~~Pl~-----~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~------ 269 (434)
T 4ea3_A 201 IAIDYYNMFTSTFTLTAMSVDRYVAICHPIR-----ALDVRTSSKAQAVNVAIWALASVVGVPVAIMGSAQVED------ 269 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCC------------CHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCS------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhEEEcccc-----cccccchhhhHHhhhhhhhHHHHHHhhHheeeeeEeec------
Confidence 9999999999999999999999999999999 88899999999999999999999999887754432211
Q ss_pred ceeeeeecCCCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccchhhhhHhhhhhhHHHHHH
Q psy9472 460 TLFESCYPFPPIDGYPNYPRTVIIMRFLIYYAVPLLIIACFYSLMARSLILSTKNMPGELQGQTRQIRARKKVAKTVLTF 539 (647)
Q Consensus 460 ~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~i 539 (647)
....|........ ..+...+.+...++.+++|+++++++|..|+++++++++... ..++.++++|..++++++
T Consensus 270 -~~~~c~~~~~~~~-~~~~~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~~~-----~~~~~~~~~~~~~~~~~v 342 (434)
T 4ea3_A 270 -EEIECLVEIPTPQ-DYWGPVFAICIFLFSFIVPVLVISVCYSLMIRRLRGVRLLSG-----SREKDRNLRRITRLVLVV 342 (434)
T ss_dssp -SCCCEEECCCSSH-HHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCSSCSS-----CHHHHHHHHHHHHHHHHH
T ss_pred -CceeEEEecCChH-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc-----chhhHHHHhHHHHHHHHH
Confidence 1234654333221 223355667778888999999999999999999987654322 334456788999999999
Q ss_pred HHHHhhccccHHHHHHHHHhCCCCCCCch-hHHHHHHHHhhhhhccC-chhHHhhcCCccccccccccCCCCC
Q psy9472 540 VVVFAMCFFPQHFFFLWFYINPTAPDDYN-DFWHILRIMSSKIINSR-NANARRFHRPSTYSSTRKWDSVSTT 610 (647)
Q Consensus 540 ~~~f~~~w~P~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ns~-NPiI~~fr~~~~~~~~~~~~~~~~~ 610 (647)
+++|++||+|+.++.++..+......... ....+...+.+ +|++ ||+||.++++.+|...++.++++.+
T Consensus 343 v~~F~i~w~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~ns~lNPiIY~~~~~~fR~~~~~~~~~~~~ 413 (434)
T 4ea3_A 343 VAVFVGCWTPVQVFVLAQGLGVQPSSETAVAILRFCTALGY--VNSCLNPILYAFLDENFKACFRKFCCASAL 413 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHH--HHHHHHHHHHHHHCHHHHHHHC--------
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCcccc
Confidence 99999999999999998876543322211 12222333444 9999 9999999998888888876654433
No 10
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=100.00 E-value=1.7e-37 Score=329.01 Aligned_cols=291 Identities=19% Similarity=0.281 Sum_probs=232.7
Q ss_pred hhhHhHHHHHHHHHHHHHHhhHHhhhhhhhcCCCCCCccchhhHHHHHHHHHHhhcccceeeeeeeccccccccccccch
Q psy9472 301 LETYLVPIVFAFIFVVGVLGNGTLVLIFINHKSMRNVPNIYILSLALGDLLVILTCVPFTSTVYTFESWPYGESICKISE 380 (647)
Q Consensus 301 ~~~~~~~~~~~~~~~~g~~~N~~vl~~i~~~~~l~~~~~~~l~~Lav~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~~ 380 (647)
....+..+++.+++++|++||+++++++.++++++++.|+|++|||++|++.+++.+|+.+.....+.|..+...|++..
T Consensus 21 ~~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~ 100 (467)
T 3uon_A 21 FEVVFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDLWL 100 (467)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHheeeeeecCccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCcchHhHHH
Confidence 44577888999999999999999999999999999999999999999999999999998888777788999999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHhhhheeeccccccccCCCcccccchhhhhhHHHHHHHHHhhhccchheeeeeeecCCCCCc
Q psy9472 381 STKDISVGVSVFTLTALSADRFFAIVDPLRKLHSGIGGKRATRCTILIVAAIWIFAILCAIPSMTLSYVRAFKDDTNNNT 460 (647)
Q Consensus 381 ~~~~~~~~~s~~~l~~ia~dRy~~i~~P~~~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (647)
++..++..+|++++++||+|||++|++|++ |+...+++++..+++++|++++++++|+++++........ .
T Consensus 101 ~~~~~~~~~s~~~l~~isidRy~ai~~P~~-----~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~----~ 171 (467)
T 3uon_A 101 ALDYVVSNASVMNLLIISFDRYFCVTKPLT-----YPVKRTTKMAGMMIAAAWVLSFILWAPAILFWQFIVGVRT----V 171 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTT-----SGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCC----C
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccc-----cccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccC----C
Confidence 999999999999999999999999999999 8889999999999999999999999998776543211111 1
Q ss_pred eeeeeecCCCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc---------------------
Q psy9472 461 LFESCYPFPPIDGYPNYPRTVIIMRFLIYYAVPLLIIACFYSLMARSLILSTKNMPGEL--------------------- 519 (647)
Q Consensus 461 ~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~~~--------------------- 519 (647)
....|..... ....+.++..++.+++|+++++++|..|++.++++.+......
T Consensus 172 ~~~~C~~~~~------~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (467)
T 3uon_A 172 EDGECYIQFF------SNAAVTFGTAIAAFYLPVIIMTVLYWHISRASKSRINIFEMLRIDEGLRLKIYKDTEGYYTIGI 245 (467)
T ss_dssp CSSCCCCGGG------GSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHSCCEEEEEECTTSCEEEET
T ss_pred CCCcceeecC------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhhcccccceeeccchhhccccc
Confidence 1234643222 2345677778889999999999999999999998754110000
Q ss_pred --------------------------------------------------------------------------------
Q psy9472 520 -------------------------------------------------------------------------------- 519 (647)
Q Consensus 520 -------------------------------------------------------------------------------- 519 (647)
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (467)
T 3uon_A 246 GHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGET 325 (467)
T ss_dssp TEECCCCSSHHHHHHHHHHHHSSCCTTBCCHHHHHHHHHHHHHHHHHHHHTCTTTHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred CcccccCCcccccccccccccccCCCCcccccccccccccccchhhcccccCCCCCccccccccccccccccceeecccc
Confidence
Q ss_pred ------------------------------------------------cchhhhhHhhhhhhHHHHHHHHHHhhccccHH
Q psy9472 520 ------------------------------------------------QGQTRQIRARKKVAKTVLTFVVVFAMCFFPQH 551 (647)
Q Consensus 520 ------------------------------------------------~~~~~~~~~~~k~~~~~~~i~~~f~~~w~P~~ 551 (647)
....+..++++|++|++++++++|++||+|+.
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~iv~~F~icw~P~~ 405 (467)
T 3uon_A 326 GVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYPPPSREKKVTRTILAILLAFIITWAPYN 405 (467)
T ss_dssp HHGGGHHHHHHHHTTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHSSSTTSCCCSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCccccccchhhhcCccccccccccccccCCCCcccccccchhhcccccccccchHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 00000013578999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCchhHHHHHHHHhhhhhccC-chhHHhhcCCccccccccccCCCCC
Q psy9472 552 FFFLWFYINPTAPDDYNDFWHILRIMSSKIINSR-NANARRFHRPSTYSSTRKWDSVSTT 610 (647)
Q Consensus 552 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ns~-NPiI~~fr~~~~~~~~~~~~~~~~~ 610 (647)
++.++..+..... ......+..++.+ +|++ ||+||.++++.+|...++.++|+.+
T Consensus 406 i~~~~~~~~~~~~--~~~~~~i~~~L~~--~ns~~NPiIY~~~~~~fR~~~~~ll~c~~~ 461 (467)
T 3uon_A 406 VMVLINTFCAPCI--PNTVWTIGYWLCY--INSTINPACYALCNATFKKTFKHLLMCHYK 461 (467)
T ss_dssp HHHHHHHHCSTTS--CHHHHHHHHHHHH--HTTTHHHHHHHHHCHHHHHHHHHHCC----
T ss_pred HHHHHHHHHhccc--chHHHHHHHHHHH--HhhhhhhHHHHHcCHHHHHHHHHHHhhhcc
Confidence 9999998875432 2334455555555 9999 9999999999988888887755443
No 11
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=100.00 E-value=9.7e-38 Score=330.61 Aligned_cols=291 Identities=24% Similarity=0.404 Sum_probs=231.0
Q ss_pred hhhHhHHHHHHHHHHHHHHhhHHhhhhhhhcCCCCCCccchhhHHHHHHHHHHhhcccceeeeeeeccccccccccccch
Q psy9472 301 LETYLVPIVFAFIFVVGVLGNGTLVLIFINHKSMRNVPNIYILSLALGDLLVILTCVPFTSTVYTFESWPYGESICKISE 380 (647)
Q Consensus 301 ~~~~~~~~~~~~~~~~g~~~N~~vl~~i~~~~~l~~~~~~~l~~Lav~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~~ 380 (647)
....++.+++.+++++|++||+++++++.+++++++++|+|++|||++|++.++. +|+.+.....+.|.++...|++..
T Consensus 15 ~~~~~~~~~~~~~~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~-~p~~~~~~~~~~~~~~~~~C~~~~ 93 (464)
T 4dkl_A 15 VTAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATST-LPFQSVNYLMGTWPFGNILCKIVI 93 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHSSCCSCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHeehhhhhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCcccccchhhhHH
Confidence 4467888999999999999999999999999999999999999999999999776 888877777788999999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHhhhheeeccccccccCCCcccccchhhhhhHHHHHHHHHhhhccchheeeeeeecCCCCCc
Q psy9472 381 STKDISVGVSVFTLTALSADRFFAIVDPLRKLHSGIGGKRATRCTILIVAAIWIFAILCAIPSMTLSYVRAFKDDTNNNT 460 (647)
Q Consensus 381 ~~~~~~~~~s~~~l~~ia~dRy~~i~~P~~~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (647)
++..++..+|++++++||+|||++|++|++ |+...+++++..+++++|++++++++|.++.........
T Consensus 94 ~~~~~~~~~s~~~l~~is~dRy~aI~~P~~-----~~~~~~~~~~~~~~~~~W~~~~~~~~p~~~~~~~~~~~~------ 162 (464)
T 4dkl_A 94 SIDYYNMFTSIFTLCTMSVDRYIAVCHPVK-----ALDFRTPRNAKIVNVCNWILSSAIGLPVMFMATTKYRQG------ 162 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCHHH-----HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSBCCEEETT------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccc-----ccccccccHhHHhHHHHHHHHHHHHHHHHHheeecccCC------
Confidence 999999999999999999999999999999 778889999999999999999999999887554433221
Q ss_pred eeeeeecCCCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc---------------------
Q psy9472 461 LFESCYPFPPIDGYPNYPRTVIIMRFLIYYAVPLLIIACFYSLMARSLILSTKNMPGEL--------------------- 519 (647)
Q Consensus 461 ~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~~~--------------------- 519 (647)
...|........ ..+...+.++.+++.+++|+++++++|..|+++++++.+......
T Consensus 163 -~~~c~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~ii~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (464)
T 4dkl_A 163 -SIDCTLTFSHPT-WYWENLLKICVFIFAFIMPVLIITVCYGLMILRLKSVRNIFEMLRIDEGLRLKIYKNTEGYYTIGI 240 (464)
T ss_dssp -EEECCBCCSSSH-HHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHCCCCCSHHHHHHHHHCCEEEEEECTTSCEEEET
T ss_pred -CceEEeecCCcc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhccccccccccccCCCCCccccc
Confidence 245655433321 122445667777888999999999999999999987655110000
Q ss_pred --------------------------------------------------------------------------------
Q psy9472 520 -------------------------------------------------------------------------------- 519 (647)
Q Consensus 520 -------------------------------------------------------------------------------- 519 (647)
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (464)
T 4dkl_A 241 GHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGET 320 (464)
T ss_dssp TEEEESSSCSHHHHHHHHHHHSSCCTTBCCHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHTSCHHHHHHHHHHHHHHCHH
T ss_pred cccccCCCccccccccccccccccccceecCCccccccccCCcccccccccCCCCCccccCcccccchhhhhccccCCCC
Confidence
Q ss_pred ------------------------------------------------cchhhhhHhhhhhhHHHHHHHHHHhhccccHH
Q psy9472 520 ------------------------------------------------QGQTRQIRARKKVAKTVLTFVVVFAMCFFPQH 551 (647)
Q Consensus 520 ------------------------------------------------~~~~~~~~~~~k~~~~~~~i~~~f~~~w~P~~ 551 (647)
....+..++++|++|++++++++|++||+|+.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~k~l~~v~~~F~icw~P~~ 400 (464)
T 4dkl_A 321 GVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYEKDRNLRRITRMVLVVVAVFIVCWTPIH 400 (464)
T ss_dssp HHHTCHHHHHHHHTTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHSSSTTTSCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccccccccchhhcccchhhcccccccccccCccccceeeecccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 00111235678999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCch-hHHHHHHHHhhhhhccC-chhHHhhcCCccccccccccCC
Q psy9472 552 FFFLWFYINPTAPDDYN-DFWHILRIMSSKIINSR-NANARRFHRPSTYSSTRKWDSV 607 (647)
Q Consensus 552 i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ns~-NPiI~~fr~~~~~~~~~~~~~~ 607 (647)
++.++..+......... ..+.+..++.+ +|++ ||+||.++++.+|...++.+++
T Consensus 401 i~~l~~~~~~~~~~~~~~~~~~~~~~L~~--~ns~~NPiIY~~~~~~fR~~~~~lc~~ 456 (464)
T 4dkl_A 401 IYVIIKALITIPETTFQTVSWHFCIALGY--TNSCLNPVLYAFLDENFKRCFREFCIP 456 (464)
T ss_dssp HHHHHHHHSCCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHCHHHHHHHHHHHC-
T ss_pred HHHHHHHHhcCCccccchhHHHHHHHHHH--hhhchhHHHHHHhhHHHHHHHHHHhcc
Confidence 99999887653322222 22233334444 9999 9999999999998888886543
No 12
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=100.00 E-value=1.9e-36 Score=300.10 Aligned_cols=279 Identities=21% Similarity=0.410 Sum_probs=218.3
Q ss_pred hhhhhHhHHHHHHHHHHHHHHhhHHhhhhhhhcCCCCCCccchhhHHHHHHHHHHhhcccceeeeeeecccccccccccc
Q psy9472 299 ERLETYLVPIVFAFIFVVGVLGNGTLVLIFINHKSMRNVPNIYILSLALGDLLVILTCVPFTSTVYTFESWPYGESICKI 378 (647)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~g~~~N~~vl~~i~~~~~l~~~~~~~l~~Lav~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~ 378 (647)
++...++..+++.+++++|++||+++++++.++|++|+++|+|+.|||++|++.++. .|...... ..+|..|+..|+.
T Consensus 7 ~~~~~~i~~i~y~ii~i~gv~gN~lvi~vi~~~~~lrt~~n~~i~nLAvaDll~~l~-~p~~~~~~-~~~~~~~~~~c~~ 84 (296)
T 2lnl_A 7 ETLNKYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALT-LPIWAASK-VNGWIFGTFLCKV 84 (296)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSTTHHHHHHHHHHHHHHHHH-HHHHHHHH-HSSSCCSSHHHHH
T ss_pred cchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHh-hhHHHhhc-cCCCccchhHHHH
Confidence 345567888999999999999999999999999999999999999999999999764 56554433 3579999999999
Q ss_pred chhhhhhhHHHHHHHHHHHHHhhhheeeccccccccCCCcccccchhhhhhHHHHHHHHHhhhccchheeeeeeecCCCC
Q psy9472 379 SESTKDISVGVSVFTLTALSADRFFAIVDPLRKLHSGIGGKRATRCTILIVAAIWIFAILCAIPSMTLSYVRAFKDDTNN 458 (647)
Q Consensus 379 ~~~~~~~~~~~s~~~l~~ia~dRy~~i~~P~~~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (647)
..++...+..+|++++++||+|||++|++|++ |+...+ ++...+++++|+.++++++|+..+.........
T Consensus 85 ~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~-----~~~~~~-~~~~~~~~~~W~~s~~~~~p~~~~~~~~~~~~~--- 155 (296)
T 2lnl_A 85 VSLLKEVNFYSGILLLACISVDRYLAIVHATR-----TLTQKR-HLVKFVCLGCWGLSMNLSLPFFLFRQAYHPNNS--- 155 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSS-----SSCCHH-HHHHHHHHHHHHHHHHHHHHHHHTSSCCCCCTT---
T ss_pred HhhhhhhhHHHHHHHHHHHHhhhhhhhhhccc-----cchhhh-hhhHheehHHHHHHHHHhcchhhcceeecCCCC---
Confidence 99999999999999999999999999999999 655444 566778889999999999998876654432222
Q ss_pred CceeeeeecCCCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccchhhhhHhhhhhhHHHHH
Q psy9472 459 NTLFESCYPFPPIDGYPNYPRTVIIMRFLIYYAVPLLIIACFYSLMARSLILSTKNMPGELQGQTRQIRARKKVAKTVLT 538 (647)
Q Consensus 459 ~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 538 (647)
...|...... ........+......+.+++|+.++..+|.++.++++++ ..++++|++|++..
T Consensus 156 ---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~i~~~~y~~i~~~~~~~-------------~~~~~~k~~~~~~~ 218 (296)
T 2lnl_A 156 ---SPVCYEVLGN-DTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKA-------------HMGQKHRAMRVIFA 218 (296)
T ss_dssp ---SCCCCSCCSC-CTTTTTTHHHHTTTHHHHHHHHHHHHHHHHHHTTTSSSC-------------CCHHHHTHHHHHHH
T ss_pred ---Cceeeeeccc-cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------hhhhhhhHHHHHHH
Confidence 1122221111 123344566677778889999999999999887766532 22456789999999
Q ss_pred HHHHHhhccccHHHHHHHHHhCCCCCCCch--------hHHHHHHHHhhhhhccC-chhHHhhcCCccccccccccCC
Q psy9472 539 FVVVFAMCFFPQHFFFLWFYINPTAPDDYN--------DFWHILRIMSSKIINSR-NANARRFHRPSTYSSTRKWDSV 607 (647)
Q Consensus 539 i~~~f~~~w~P~~i~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~ns~-NPiI~~fr~~~~~~~~~~~~~~ 607 (647)
++++|++||+|+.+..++..+......... ........+++ +||+ ||+||.++++.+|+..++..++
T Consensus 219 v~~~f~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~ns~~NPiIY~~~~~~fR~~~~~ll~c 294 (296)
T 2lnl_A 219 VVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGF--LHSCLNPIIYAFIGQNFRHGFLKILAM 294 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCSSSCSCHHHHHHHTTHHHHHHHHHGG--GGGTHHHHHHHHHCSHHHHHHHHHHHH
T ss_pred hhhheeeeehHHHHHHHHHHHhccccCCcchhhhhHHHHHHHHHHHHHH--HHHHHHHHHHHhcCHHHHHHHHHHhcC
Confidence 999999999999999999888755433221 12233444555 9999 9999999999999888876543
No 13
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=100.00 E-value=5e-38 Score=331.13 Aligned_cols=300 Identities=19% Similarity=0.227 Sum_probs=227.6
Q ss_pred hhhhhHhHHHHHHHHHHHHHHhhHHhhhhhhhcCCCCCCccchhhHHHHHHHHHHhhcccceeeeeeecccccccccccc
Q psy9472 299 ERLETYLVPIVFAFIFVVGVLGNGTLVLIFINHKSMRNVPNIYILSLALGDLLVILTCVPFTSTVYTFESWPYGESICKI 378 (647)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~g~~~N~~vl~~i~~~~~l~~~~~~~l~~Lav~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~ 378 (647)
......+..+++.+++++|++||+++++++.+++++++++|+|++|||++|++.+++.+|+.+. ....|..+...|++
T Consensus 27 ~~~~~~~~~~i~~~i~~~gi~gN~~vl~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~~p~~~~--~~~~~~~~~~~C~~ 104 (447)
T 4eiy_A 27 PIMGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAIT--ISTGFCAACHGCLF 104 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHH--HHTTCEEEHHHHHH
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHccccCcHHHHHHHHHHHHHHHHHHHHHHHHHH--HhcccccCccHHHH
Confidence 4456678889999999999999999999999999999999999999999999999888887665 23467778899999
Q ss_pred chhhhhhhHHHHHHHHHHHHHhhhheeeccccccccCCCcccccchhhhhhHHHHHHHHHhhhccchheeeeeeecCCCC
Q psy9472 379 SESTKDISVGVSVFTLTALSADRFFAIVDPLRKLHSGIGGKRATRCTILIVAAIWIFAILCAIPSMTLSYVRAFKDDTNN 458 (647)
Q Consensus 379 ~~~~~~~~~~~s~~~l~~ia~dRy~~i~~P~~~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (647)
..++..++..+|++++++||+|||++|++|++ |+...+++++..+++++|++++++++|+++++........ .
T Consensus 105 ~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~-----~~~~~~~~~~~~~i~~~Wi~s~~~~~~~~~~~~~~~~~~~--~ 177 (447)
T 4eiy_A 105 IACFVLVLTQSSIFSLLAIAIDRYIAIRIPLR-----YNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKE--G 177 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH-----HHHHSCHHHHHHHHHHHHHHHHHHHTGGGGTCSSTTSCCH--H
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHeEEecccc-----cchhhhHHHHHHHHhHHHHHHHHHHHhhhheeccccccCc--c
Confidence 99999999999999999999999999999999 7888999999999999999999999998876543221110 0
Q ss_pred CceeeeeecCCCCC--CCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc------------------
Q psy9472 459 NTLFESCYPFPPID--GYPNYPRTVIIMRFLIYYAVPLLIIACFYSLMARSLILSTKNMPGE------------------ 518 (647)
Q Consensus 459 ~~~~~~C~~~~~~~--~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~~------------------ 518 (647)
......|....... ........+..+.+++.+++|+++++++|.+|++.++++.++....
T Consensus 178 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (447)
T 4eiy_A 178 KNHSQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLADLEDNWETLNDNLKVIEKADNAA 257 (447)
T ss_dssp HHHHTTCCTTEEECCHHHHSCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSHH
T ss_pred ccccccccccchhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHhccCcCcCCccccch
Confidence 00111232111000 0011123333344556689999999999999999999874422110
Q ss_pred --------------------------------------------------------------------------------
Q psy9472 519 -------------------------------------------------------------------------------- 518 (647)
Q Consensus 519 -------------------------------------------------------------------------------- 518 (647)
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (447)
T 4eiy_A 258 QVKDALTKMRAAALDAQKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQK 337 (447)
T ss_dssp HHHHHHHHHHHHHHHHHC---------------CHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTHHHHHHHTHHH
T ss_pred hhhccchhhhccCCCCCCCCCCCCcCCCCCCcccccccCCCCCCCCccchhhhhcccCCcCcccchhhhhcccccchhhc
Confidence
Q ss_pred -ccchhhhhHhhhhhhHHHHHHHHHHhhccccHHHHHHHHHhCCCCCCCchhHHHHHHHHhhhhhccC-chhHHhhcCCc
Q psy9472 519 -LQGQTRQIRARKKVAKTVLTFVVVFAMCFFPQHFFFLWFYINPTAPDDYNDFWHILRIMSSKIINSR-NANARRFHRPS 596 (647)
Q Consensus 519 -~~~~~~~~~~~~k~~~~~~~i~~~f~~~w~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ns~-NPiI~~fr~~~ 596 (647)
.....+..++++|++|++++++++|++||+|+.++.++..+.+...........+..++.+ +|++ ||+||.++++.
T Consensus 338 ~~~~~~~~~~~~~r~~k~l~~vv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~--~ns~~NPiIY~~~~~~ 415 (447)
T 4eiy_A 338 YLERARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSH--TNSVVNPFIYAYRIRE 415 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCCCHHHHHHHHHHHH--HHHHHHHHHHHHHCHH
T ss_pred cccchhHHHHHHHHHHHHHHHhhhhhheeccHHHHHHHHHHhcCcccccchHHHHHHHHHHH--HHhccchhhhHhccHH
Confidence 0011123467889999999999999999999999999988876544444444455556666 9999 99999988888
Q ss_pred cccccccccCCCC
Q psy9472 597 TYSSTRKWDSVST 609 (647)
Q Consensus 597 ~~~~~~~~~~~~~ 609 (647)
+|...++.+++..
T Consensus 416 fR~~~~~~~~~~~ 428 (447)
T 4eiy_A 416 FRQTFRKIIRSHV 428 (447)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHH
Confidence 8887777654443
No 14
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=323.51 Aligned_cols=287 Identities=17% Similarity=0.258 Sum_probs=224.9
Q ss_pred hhhHhHHHHHHHHHHHHHHhhHHhhhhhhhcCCCCCCccchhhHHHHHHHHHHhhcccceeeeeee-ccccccccccccc
Q psy9472 301 LETYLVPIVFAFIFVVGVLGNGTLVLIFINHKSMRNVPNIYILSLALGDLLVILTCVPFTSTVYTF-ESWPYGESICKIS 379 (647)
Q Consensus 301 ~~~~~~~~~~~~~~~~g~~~N~~vl~~i~~~~~l~~~~~~~l~~Lav~Dll~~~~~~~~~~~~~~~-~~~~~~~~~C~~~ 379 (647)
....+..+++.+++++|++||+++++++.++++++++.|+|++|||++|++.+++.+|+.+..... +.|.++...|++.
T Consensus 36 ~~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~C~~~ 115 (481)
T 3pbl_A 36 RPHAYYALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVWNFSRICCDVF 115 (481)
T ss_dssp -----CCSHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTSCCCSCHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCcchhhhH
Confidence 345677889999999999999999999999999999999999999999999999889987765554 5799999999999
Q ss_pred hhhhhhhHHHHHHHHHHHHHhhhheeeccccccccCCCcccccchhhhhhHHHHHHHHHhhhccchheeeeeeecCCCCC
Q psy9472 380 ESTKDISVGVSVFTLTALSADRFFAIVDPLRKLHSGIGGKRATRCTILIVAAIWIFAILCAIPSMTLSYVRAFKDDTNNN 459 (647)
Q Consensus 380 ~~~~~~~~~~s~~~l~~ia~dRy~~i~~P~~~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (647)
.++..++..+|++++++||+|||++|++|++|.. .....+++++..+++++|++++++++|+++.+....
T Consensus 116 ~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~--~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~-------- 185 (481)
T 3pbl_A 116 VTLDVMMCTASIWNLCAISIDRYTAVVMPVHYQH--GTGQSSCRRVALMITAVWVLAFAVSCPLLFGFNTTG-------- 185 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHH--TTSSSCHHHHHHHHHHHHHHHHHHHHHHHTTTCCCS--------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccccccc--ccccccHHHHHHHHHHHHHHHHHHHHHHHheecccC--------
Confidence 9999999999999999999999999999999211 056788899999999999999999999877543211
Q ss_pred ceeeeeecCCCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc------------------
Q psy9472 460 TLFESCYPFPPIDGYPNYPRTVIIMRFLIYYAVPLLIIACFYSLMARSLILSTKNMPGELQG------------------ 521 (647)
Q Consensus 460 ~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~~~~~------------------ 521 (647)
....|.. ....+..+..++.+++|+++++++|..|++.++++.++.......
T Consensus 186 -~~~~C~~---------~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (481)
T 3pbl_A 186 -DPTVCSI---------SNPDFVIYSSVVSFYLPFGVTVLVYARIYVVLKQRRRKNIFEMLRIDEGLRLKIYKDTEGYYT 255 (481)
T ss_dssp -STTCCSC---------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCSSCEECSSSCEE
T ss_pred -CCCcccc---------cCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccccchhccccccCccccee
Confidence 1124532 123466777888999999999999999999999876542100000
Q ss_pred --------------------------------------------------------------------------------
Q psy9472 522 -------------------------------------------------------------------------------- 521 (647)
Q Consensus 522 -------------------------------------------------------------------------------- 521 (647)
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (481)
T 3pbl_A 256 IGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM 335 (481)
T ss_dssp ETTTEEEESSSCHHHHHHHHHHHHTSCCTTCCCHHHHHHHHHHHHHHHHHHHHHCTTTHHHHHTSCHHHHHHHHHHHHHH
T ss_pred ecccccccCCcccccCCCcccchhccCCCceeccCCchhcccCCcccccccccccCccCccccccccccchhcccccccc
Confidence
Q ss_pred -----------------------------------------------------hhhhhHhhhhhhHHHHHHHHHHhhccc
Q psy9472 522 -----------------------------------------------------QTRQIRARKKVAKTVLTFVVVFAMCFF 548 (647)
Q Consensus 522 -----------------------------------------------------~~~~~~~~~k~~~~~~~i~~~f~~~w~ 548 (647)
.....++++|+++++++++++|++||+
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~iv~~F~icw~ 415 (481)
T 3pbl_A 336 GETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGVPLREKKATQMVAIVLGAFIVCWL 415 (481)
T ss_dssp HHHHHTTCHHHHHHHHTTCHHHHHHHHHTSHHHHHSHHHHHHHHHHHHHSSSTTSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCcccccchhccccccccchhhhccccccCCcccccccceeecccccccccccchhhhHHHHHHHHHHHHHHHhh
Confidence 000012589999999999999999999
Q ss_pred cHHHHHHHHHhCCCCCCCchhHHHHHHHHhhhhhccC-chhHHhhcCCccccccccccCCCCC
Q psy9472 549 PQHFFFLWFYINPTAPDDYNDFWHILRIMSSKIINSR-NANARRFHRPSTYSSTRKWDSVSTT 610 (647)
Q Consensus 549 P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ns~-NPiI~~fr~~~~~~~~~~~~~~~~~ 610 (647)
|+.++.++..+...... ......+..++.+ +|++ ||+||.++++.+|...++.++|+++
T Consensus 416 P~~i~~~~~~~~~~~~~-~~~~~~~~~~L~~--~ns~~NPiIY~~~~~~fR~~~~~ll~c~~~ 475 (481)
T 3pbl_A 416 PFFLTHVLNTHCQTCHV-SPELYSATTWLGY--VNSALNPVIYTTFNIEFRKAFLKILSCGRP 475 (481)
T ss_dssp HHHHHHHHHHSCSSCCC-CHHHHHHHHHHHH--HHHHHHHHHHHHHCHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHhccccccC-cHHHHHHHHHHHH--HhhccchHHHHHcCHHHHHHHHHHHhccCc
Confidence 99999999887654322 3334445555665 9999 9999999999999888887765443
No 15
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=100.00 E-value=1.6e-36 Score=320.15 Aligned_cols=290 Identities=18% Similarity=0.269 Sum_probs=227.5
Q ss_pred hhHhHHHHHHHHHHHHHHhhHHhhhhhhhcCCCCCCccchhhHHHHHHHHHHhhcccceeeeeeeccccccccccccchh
Q psy9472 302 ETYLVPIVFAFIFVVGVLGNGTLVLIFINHKSMRNVPNIYILSLALGDLLVILTCVPFTSTVYTFESWPYGESICKISES 381 (647)
Q Consensus 302 ~~~~~~~~~~~~~~~g~~~N~~vl~~i~~~~~l~~~~~~~l~~Lav~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~ 381 (647)
...++.+++.+++++|++||+++++++.++++++++.|+|++|||++|++.+++.+|+.+.....+.|.++...|++..+
T Consensus 7 ~~~~~~~~~~~~~~~gi~gN~~vi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~ 86 (452)
T 3rze_A 7 QLMPLVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLLMSKWSLGRPLCLFWLS 86 (452)
T ss_dssp --CGGGTHHHHHHHHHHHHHHHHHHHHHHCSTTCCGGGHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCchhHhHHHH
Confidence 34567889999999999999999999999999999999999999999999999999998887777899999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHhhhheeeccccccccCCCcccccchhhhhhHHHHHHHHHhhhccchheeeeeeecCCCCCce
Q psy9472 382 TKDISVGVSVFTLTALSADRFFAIVDPLRKLHSGIGGKRATRCTILIVAAIWIFAILCAIPSMTLSYVRAFKDDTNNNTL 461 (647)
Q Consensus 382 ~~~~~~~~s~~~l~~ia~dRy~~i~~P~~~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (647)
+..++..+|++++++||+|||++|++|++ |+...+++++..+++++|++++++++|.+.......... ...
T Consensus 87 ~~~~~~~~s~~~l~~is~dRy~aI~~P~~-----~~~~~~~~~~~~~i~~~W~~~~~~~~p~~~~~~~~~~~~----~~~ 157 (452)
T 3rze_A 87 MDYVASTASIFSVFILCIDRYRSVQQPLR-----YLKYRTKTRASATILGAWFLSFLWVIPILGWNHFMQQTS----VRR 157 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSCC-----TTTTSSHHHHHHHHHHHHHHHGGGHHHHHCCCC-----------CC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHheeCccc-----cccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccc----cCC
Confidence 99999999999999999999999999999 888999999999999999999999988654332221110 112
Q ss_pred eeeeecCCCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc----------------------
Q psy9472 462 FESCYPFPPIDGYPNYPRTVIIMRFLIYYAVPLLIIACFYSLMARSLILSTKNMPGEL---------------------- 519 (647)
Q Consensus 462 ~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~~~---------------------- 519 (647)
...|.... .....+.++..++.+++|+++++++|..|++.++++.+......
T Consensus 158 ~~~C~~~~------~~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (452)
T 3rze_A 158 EDKCETDF------YDVTWFKVMTAIINFYLPTLLMLWFYAKIYKAVRQHCNIFEMLRIDEGLRLKIYKDTEGYYTIGIG 231 (452)
T ss_dssp SSSSCCSC------TTCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHCEEEEEEECTTSCEEEEET
T ss_pred CCeecCCC------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHhhhhhhhhhhhcccCCcccccccc
Confidence 23454322 12344667778888999999999999999999987643210000
Q ss_pred --------------------------------------------------------------------------------
Q psy9472 520 -------------------------------------------------------------------------------- 519 (647)
Q Consensus 520 -------------------------------------------------------------------------------- 519 (647)
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (452)
T 3rze_A 232 HLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETG 311 (452)
T ss_dssp EECSSCSSHHHHHHHHHHHHTSCCTTBCCHHHHHHHHHHHHHHHHHHHHTCTTTHHHHHHSCHHHHHHHHHHHHHHCHHH
T ss_pred cccccCCCCCcccccccCCCCCCCCccccCCcccchhcCCCcccccCcccccccCCcccCCCccccccccccccccCCCC
Confidence
Q ss_pred -----------------------------------------------cchhhhhHhhhhhhHHHHHHHHHHhhccccHHH
Q psy9472 520 -----------------------------------------------QGQTRQIRARKKVAKTVLTFVVVFAMCFFPQHF 552 (647)
Q Consensus 520 -----------------------------------------------~~~~~~~~~~~k~~~~~~~i~~~f~~~w~P~~i 552 (647)
.......++++|+++++++++++|++||+|+.+
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~vv~~f~icwlP~~i 391 (452)
T 3rze_A 312 VAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYLHMNRERKAAKQLGFIMAAFILCWIPYFI 391 (452)
T ss_dssp HTSCHHHHHHHHTTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHSSSGGGCSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccccCcchhhhcCCccccccccCCccCCCCCcccchhhhhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 000012237889999999999999999999999
Q ss_pred HHHHHHhCCCCCCCchhHHHHHHHHhhhhhccC-chhHHhhcCCccccccccccCCCCC
Q psy9472 553 FFLWFYINPTAPDDYNDFWHILRIMSSKIINSR-NANARRFHRPSTYSSTRKWDSVSTT 610 (647)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ns~-NPiI~~fr~~~~~~~~~~~~~~~~~ 610 (647)
+.++..+........ ...+..++.+ +|++ ||+||.++++.+|...++.++++..
T Consensus 392 ~~l~~~~~~~~~~~~--~~~~~~~L~~--~ns~~NPiIY~~~~~~fR~~~~~ll~~~~~ 446 (452)
T 3rze_A 392 FFMVIAFCKNCCNEH--LHMFTIWLGY--INSTLNPLIYPLCNENFKKTFKRILHIRSG 446 (452)
T ss_dssp HHHHHHHHSCCSCTT--THHHHHHHHH--HHHHHHHHHHHHHCHHHHHHHHHHHTC---
T ss_pred HHHHHHHhcccccHH--HHHHHHHHHH--HHhcccchhhhhccHHHHHHHHHHHHhccc
Confidence 999988865543322 2334555555 9999 9999999999988888887655443
No 16
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=100.00 E-value=2.6e-36 Score=302.31 Aligned_cols=292 Identities=20% Similarity=0.302 Sum_probs=228.5
Q ss_pred hhhhHhHHHHHHHHHHHHHHhhHHhhhhhhhcCCCCCCccchhhHHHHHHHHHHhhcccceeeeeeeccccccccccccc
Q psy9472 300 RLETYLVPIVFAFIFVVGVLGNGTLVLIFINHKSMRNVPNIYILSLALGDLLVILTCVPFTSTVYTFESWPYGESICKIS 379 (647)
Q Consensus 300 ~~~~~~~~~~~~~~~~~g~~~N~~vl~~i~~~~~l~~~~~~~l~~Lav~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 379 (647)
+.......+++.+++++|++||+++++++.+++++|+++|++++|||++|++.++..+|..+.....+.|..|+..|++.
T Consensus 8 ~~~~~~~~~~~~~~~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~ 87 (315)
T 4amj_A 8 QQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELW 87 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHSSCCSCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhchhhcchHHHHHHHHHHHHHHHHHHhccHHHHHHhcCCeeccccHHHHH
Confidence 34456788899999999999999999999999999999999999999999999888889887777778899999999999
Q ss_pred hhhhhhhHHHHHHHHHHHHHhhhheeeccccccccCCCcccccchhhhhhHHHHHHHHHhhhccchheeeeeeecCCCCC
Q psy9472 380 ESTKDISVGVSVFTLTALSADRFFAIVDPLRKLHSGIGGKRATRCTILIVAAIWIFAILCAIPSMTLSYVRAFKDDTNNN 459 (647)
Q Consensus 380 ~~~~~~~~~~s~~~l~~ia~dRy~~i~~P~~~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (647)
.++..++..+|++++++||+|||++|++|++ |+...+++++..+++++|++++++++|+.+....... .
T Consensus 88 ~~~~~~~~~~S~~~l~~isidRy~aI~~P~~-----~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~------~ 156 (315)
T 4amj_A 88 TSLDVLCVTASIETLCVIAIDRYLAITSPFR-----YQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDE------D 156 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH-----HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCC------S
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccccc-----cccccchhhHHHhhhHHHHHHHHHHHHHHHHHhcccc------C
Confidence 9999999999999999999999999999999 7788899999999999999999999887765432211 1
Q ss_pred ceeeeeecCCCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc--chhhhhHhhhhhhHHHH
Q psy9472 460 TLFESCYPFPPIDGYPNYPRTVIIMRFLIYYAVPLLIIACFYSLMARSLILSTKNMPGELQ--GQTRQIRARKKVAKTVL 537 (647)
Q Consensus 460 ~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~~~~--~~~~~~~~~~k~~~~~~ 537 (647)
.....|........ ......+.....++.+++|+++++++|.+|++.++++.++..+..+ .+++..++++|+++++.
T Consensus 157 ~~~~~c~~~~~~~~-~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 235 (315)
T 4amj_A 157 PQALKCYQDPGCCD-FVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASKRKTSRVMLMREHKALKTLG 235 (315)
T ss_dssp HHHHHHHHCTTCCC-CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHTC------------CHHHHHHHHHHHHHHH
T ss_pred CCccccccccccch-hhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccchhhhhhhhhHHHHHH
Confidence 12234544332221 2344566667777788999999999999999999987765543322 22333457889999999
Q ss_pred HHHHHHhhccccHHHHHHHHHhCCCCCCCchhHHHHHHHHhhhhhccC-chhHHhhcCCccccccccccCCC
Q psy9472 538 TFVVVFAMCFFPQHFFFLWFYINPTAPDDYNDFWHILRIMSSKIINSR-NANARRFHRPSTYSSTRKWDSVS 608 (647)
Q Consensus 538 ~i~~~f~~~w~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ns~-NPiI~~fr~~~~~~~~~~~~~~~ 608 (647)
+++++|++||+|+.+..++..+...... .........+.+ +|++ ||+||. +++.+|...++.++++
T Consensus 236 ~~~~~f~i~~~P~~i~~~~~~~~~~~~~--~~~~~~~~~l~~--~ns~~nPiiY~-~~~~fR~~~~~~l~~~ 302 (315)
T 4amj_A 236 IIMGVFTLCWLPFFLVNIVNVFNRDLVP--DWLFVAFNWLGY--ANSAMNPIIYC-RSPDFRKAFKRLLAFP 302 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCTTSSC--HHHHHHHHHHHH--HGGGTHHHHGG-GSHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCccch--HHHHHHHHHHHH--HhccccHHHHc-CcHHHHHHHHHHhCCC
Confidence 9999999999999999999888654322 223334444555 9999 999998 7888888887776543
No 17
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=100.00 E-value=5.6e-35 Score=307.50 Aligned_cols=289 Identities=20% Similarity=0.296 Sum_probs=225.3
Q ss_pred hhhHhHHHHHHHHHHHHHHhhHHhhhhhhhcCCCCCCccchhhHHHHHHHHHHhh-cccceeeeeeeccccccccccccc
Q psy9472 301 LETYLVPIVFAFIFVVGVLGNGTLVLIFINHKSMRNVPNIYILSLALGDLLVILT-CVPFTSTVYTFESWPYGESICKIS 379 (647)
Q Consensus 301 ~~~~~~~~~~~~~~~~g~~~N~~vl~~i~~~~~l~~~~~~~l~~Lav~Dll~~~~-~~~~~~~~~~~~~~~~~~~~C~~~ 379 (647)
....++.+++.+++++|++||+++++++.+++++|++.|++++|||++|++.+++ .+|+.+.....+.|.++...|++.
T Consensus 32 ~~~~~~~i~~~ii~i~gi~gN~lvi~vi~~~~~~~~~~~~ll~~LaiaDll~~~~~~~p~~~~~~~~~~~~~~~~~C~~~ 111 (448)
T 2z73_A 32 AVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVY 111 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSTTHHHHHHHHHHHHHHHHHHSTTHHHHHHHTTSCCSHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhhhhhhccccCCccchHHHHHHHHHHHHHHHHhccHHHHHHhcCCccCCHHHHHHH
Confidence 3456778899999999999999999999999999999999999999999999876 378776666667899999999999
Q ss_pred hhhhhhhHHHHHHHHHHHHHhhhheeeccccccccCCCcccccchhhhhhHHHHHHHHHhhhccchheeeeeeecCCCCC
Q psy9472 380 ESTKDISVGVSVFTLTALSADRFFAIVDPLRKLHSGIGGKRATRCTILIVAAIWIFAILCAIPSMTLSYVRAFKDDTNNN 459 (647)
Q Consensus 380 ~~~~~~~~~~s~~~l~~ia~dRy~~i~~P~~~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (647)
.++..++..+|++++++||+|||++|++|++ |+...+++++..+++++|+++++++++.++.+.......
T Consensus 112 ~~~~~~~~~~S~~~l~~isidRy~aI~~P~~-----~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~----- 181 (448)
T 2z73_A 112 GFIGGIFGFMSIMTMAMISIDRYNVIGRPMA-----ASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLEG----- 181 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSCTT-----TCCCCCHHHHHHHHHHHHHHHHHHHSGGGGTSSCEEECT-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccc-----ccceechhHHHHHHHHHHHHHHHHHHHHHhceeeeeecC-----
Confidence 9999999999999999999999999999999 788899999999999999999999998887665443321
Q ss_pred ceeeeeecCCCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC--------cccchhhhhHhhhh
Q psy9472 460 TLFESCYPFPPIDGYPNYPRTVIIMRFLIYYAVPLLIIACFYSLMARSLILSTKNMPG--------ELQGQTRQIRARKK 531 (647)
Q Consensus 460 ~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~--------~~~~~~~~~~~~~k 531 (647)
....|....... ......+.....++.+++|+++++++|..|+++++++.++... ......+..++++|
T Consensus 182 -~~~~c~~~~~~~--~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 258 (448)
T 2z73_A 182 -VLCNCSFDYISR--DSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMR 258 (448)
T ss_dssp -TSSSEEECCSCC--SHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTTTCCTTHHHHHHHHHHHHH
T ss_pred -CceeEecccccC--CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhccccHHHH
Confidence 123565433221 1223455566667779999999999999999999876543211 11111223356889
Q ss_pred hhHHHHHHHHHHhhccccHHHHHHHHHhCCCCCCCchhHHHHHHHHhhhhhccC-chhHHhhcCCcccccccccc
Q psy9472 532 VAKTVLTFVVVFAMCFFPQHFFFLWFYINPTAPDDYNDFWHILRIMSSKIINSR-NANARRFHRPSTYSSTRKWD 605 (647)
Q Consensus 532 ~~~~~~~i~~~f~~~w~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ns~-NPiI~~fr~~~~~~~~~~~~ 605 (647)
++|++++++++|++||+|+.++.++..+....... .....+..++.. +|++ ||+||.++++.+|+..++.+
T Consensus 259 ~~~~l~~iv~~F~i~~~P~~i~~~~~~~~~~~~~~-~~~~~~~~~l~~--~ns~~NPiIY~~~~~~fR~~~~~~~ 330 (448)
T 2z73_A 259 LAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVT-PYAAQLPVMFAK--ASAIHNPMIYSVSHPKFREAISQTF 330 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGCC-HHHHHHHHHHHH--HGGGSHHHHHHHHCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCcccCC-hHHHHHHHHHHH--HHHhhcchHHHHhhHHHHHHHHHHH
Confidence 99999999999999999999999988876432211 222233334444 9999 99998887777766665543
No 18
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=100.00 E-value=1.9e-35 Score=316.26 Aligned_cols=290 Identities=21% Similarity=0.323 Sum_probs=223.6
Q ss_pred hhHhHHHHHHHHHHHHHHhhHHhhhhhhhcCCCCCCccchhhHHHHHHHHHHhhcccceeeeeeeccccccccccccchh
Q psy9472 302 ETYLVPIVFAFIFVVGVLGNGTLVLIFINHKSMRNVPNIYILSLALGDLLVILTCVPFTSTVYTFESWPYGESICKISES 381 (647)
Q Consensus 302 ~~~~~~~~~~~~~~~g~~~N~~vl~~i~~~~~l~~~~~~~l~~Lav~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~ 381 (647)
...+..+++.+++++|++||+++++++.+++++|++.|+|++|||++|++.+++.+|+.+.....+.|.++...|++..+
T Consensus 181 ~~~~~~i~~~ii~~~gi~gN~lvi~vi~~~~~lr~~~~~ll~nLAiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~ 260 (514)
T 3sn6_R 181 WVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCEFWTS 260 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHTSCCSCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHhhhheecccccccHHHHHHHHHHHHHHHHHHHhCHHHHHHHHcCCeeCCcchhhhHHH
Confidence 44577889999999999999999999999999999999999999999999998889988877777889999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHhhhheeeccccccccCCCcccccchhhhhhHHHHHHHHHhhhccchheeeeeeecCCCCCce
Q psy9472 382 TKDISVGVSVFTLTALSADRFFAIVDPLRKLHSGIGGKRATRCTILIVAAIWIFAILCAIPSMTLSYVRAFKDDTNNNTL 461 (647)
Q Consensus 382 ~~~~~~~~s~~~l~~ia~dRy~~i~~P~~~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (647)
+..++..+|++++++||+|||++|++|++ |+...+++++..+++++|+++++++++++......... ..
T Consensus 261 l~~~~~~~S~~~l~~isidRy~aI~~Pl~-----~~~~~t~~~~~~~i~~~Wi~s~l~~~~p~~~~~~~~~~------~~ 329 (514)
T 3sn6_R 261 IDVLCVTASIETLCVIAVDRYFAITSPFK-----YQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATH------QE 329 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSHHH-----HHHHCCHHHHHHHHHHHHHHHHHTTHHHHHTTTTC---------CH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCccc-----cchhccchHHHHHHHHHHHHHHHHHhhhhhccceeccc------Cc
Confidence 99999999999999999999999999999 77889999999999999999999987665443221111 11
Q ss_pred eeeeecCCCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc---------------------cc
Q psy9472 462 FESCYPFPPIDGYPNYPRTVIIMRFLIYYAVPLLIIACFYSLMARSLILSTKNMPGE---------------------LQ 520 (647)
Q Consensus 462 ~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~~---------------------~~ 520 (647)
...|........ ......|.++..++.+++|+++++++|.+|++.++++.++.... ..
T Consensus 330 ~~~c~~~~~~~~-~~~~~~y~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (514)
T 3sn6_R 330 AINCYAEETCCD-FFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKIDKSEGRFHVQNLSQVEQDGRTGHGLR 408 (514)
T ss_dssp HHHHHHSSSCCC-CCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--------------------
T ss_pred ccceeecccccc-cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccc
Confidence 123332221111 22345677788889999999999999999999998764321110 01
Q ss_pred chhhhhHhhhhhhHHHHHHHHHHhhccccHHHHHHHHHhCCCCCCCchhHHHHHHHHhhhhhccC-chhHHhhcCCcccc
Q psy9472 521 GQTRQIRARKKVAKTVLTFVVVFAMCFFPQHFFFLWFYINPTAPDDYNDFWHILRIMSSKIINSR-NANARRFHRPSTYS 599 (647)
Q Consensus 521 ~~~~~~~~~~k~~~~~~~i~~~f~~~w~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ns~-NPiI~~fr~~~~~~ 599 (647)
...+..++++|+++++++++++|++||+|+.++.++..+..... ......+..++.+ +|++ ||+||. +++.+|.
T Consensus 409 ~~~~~~~~~~r~~~~l~~iv~~F~lcwlP~~i~~~~~~~~~~~~--~~~~~~~~~~l~~--~ns~~NPiIY~-~~~~fR~ 483 (514)
T 3sn6_R 409 RSSKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLI--RKEVYILLNWIGY--VNSGFNPLIYC-RSPDFRI 483 (514)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSS--CHHHHHHHHHHHH--HHHHHHHHHHT-TCHHHHH
T ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc--chHHHHHHHHHHH--HHHhhhHHhhc-CCHHHHH
Confidence 11223357789999999999999999999999999888754322 2223344445555 9999 999998 6777777
Q ss_pred ccccccCCC
Q psy9472 600 STRKWDSVS 608 (647)
Q Consensus 600 ~~~~~~~~~ 608 (647)
..++.++++
T Consensus 484 ~~~~~l~~~ 492 (514)
T 3sn6_R 484 AFQELLCLR 492 (514)
T ss_dssp HHHTTCC--
T ss_pred HHHHHhCcC
Confidence 776665443
No 19
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=99.95 E-value=3.1e-29 Score=267.24 Aligned_cols=207 Identities=23% Similarity=0.364 Sum_probs=148.9
Q ss_pred CccceehhhhccccccccCCCCcccchhhhhhhHHHHHHHHHhhhchHhhheeEeeccCCCCCccceeeecCCCCCCCCC
Q psy9472 1 LSADRFFAIVDPLRKLHSGIGGKRATRCTILIVAAIWIFAILCAIPSMTLSYVRAFKDDTNNNTLFESCYPFPPIDGYPN 80 (647)
Q Consensus 1 isidRy~aI~~P~~~~~~~y~~~~~~~~~~~~i~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~ 80 (647)
||+|||+||++|++ |+.+++++++..+++++|++++++++|+++.........+. .......|...++..
T Consensus 131 is~dRy~ai~~P~~-----~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~-~~~~~~~c~~~~~~~---- 200 (510)
T 4grv_A 131 LSVARYLAICHPFK-----AKTLMSRSRTKKFISAIWLASALLAIPMLFTMGLQNRSADG-THPGGLVCTPIVDTA---- 200 (510)
T ss_dssp HHHHHHHHHHSCCC-----CCCCCCCSCCHHHHHHHHHHHHHHHTTHHHHEEEEECSSSS-CCGGGEEEEECSCHH----
T ss_pred HHHHheEEEecccc-----ccccccccccceeehHHHHHHHHHHHHHHHhhcccccccCC-CCCCccccccccccc----
Confidence 58999999999999 77789999999999999999999999999876655443332 222233466544321
Q ss_pred CcchhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhccCCCCC---------------------------------------
Q psy9472 81 YPRTVIIMRFLIYYAVPLLIIACFYSLMARSLILSTKNMPG--------------------------------------- 121 (647)
Q Consensus 81 ~~~~~~~~~~~~~~~~p~~ii~~~y~~i~~~~~~~~~~~~~--------------------------------------- 121 (647)
....|..+.+++.|++|+++|+++|.+|++.++++.+....
T Consensus 201 ~~~~~~~~~~~~~f~iP~~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (510)
T 4grv_A 201 TVKVVIQVNTFMSFLFPMLVISILNTVIANKLTVMVNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSE 280 (510)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTSCTHHHHHHHHTCCEEEEEECTTSCEEEETTEECCCSSSHHHHHHS
T ss_pred hhhhhhhhhhhHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccccccccccccCCCCCCCccccc
Confidence 23566777788889999999999999999999764321000
Q ss_pred --------------------------------------------------------------------------------
Q psy9472 122 -------------------------------------------------------------------------------- 121 (647)
Q Consensus 122 -------------------------------------------------------------------------------- 121 (647)
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (510)
T 4grv_A 281 LDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLNNKR 360 (510)
T ss_dssp CCC---CCCTTBCCHHHHHHHHHHHHHHHHHHHHHCTTTHHHHHHSCSHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTC
T ss_pred cCcCCCCCCCCcccCCccccccCCCCcccccccccCCCCCCCcCccccccccccCCccccCCCCCCCCCCccccccccCC
Confidence
Q ss_pred ---------------Ccc-----------------hhHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHhcCCCCC
Q psy9472 122 ---------------ELQ-----------------GQTRQIRARKKVAKTVLTFVVVFAMCFFPQHFFFLWFYINPTAPD 169 (647)
Q Consensus 122 ---------------~~~-----------------~~~~~~~~~~k~~~~~~~i~~~f~~~~~P~~i~~~~~~~~~~~~~ 169 (647)
+.+ ...+..++|+|++||+++|+++|++||+||++..++..+......
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~erk~~k~L~iVv~~F~iCWlPf~i~~l~~~~~~~~~~ 440 (510)
T 4grv_A 361 WDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGSGSVQALRHGVLVARAVVIAFVVCWLPYHVRRLMFCYISDEQW 440 (510)
T ss_dssp HHHHHHHHHSSCSCCSSHHHHHHHHHHHHHSSSGGGTTSTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCC
T ss_pred CcccccccccccccccCCccccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccC
Confidence 000 000012357899999999999999999999999998877654322
Q ss_pred C--hhhHHHHHHHHHHHHhhhhchhhHHHHHHhcHHHHHHHHHhhccccc
Q psy9472 170 D--YNDFWHILRIVGFCLGFINSCINPIALYCVSGTFRKYFQKYLFCKMS 217 (647)
Q Consensus 170 ~--~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~~~ 217 (647)
. ......++..++.+|+++||++||+||+++|++||++++++++|+..
T Consensus 441 ~~~~~~~~~~~~~~~~~L~Y~NS~iNPiIY~~~n~~FR~aFk~iL~C~C~ 490 (510)
T 4grv_A 441 TTFLFDFYHYFYMLTNALAYASSAINPILYNLVSANFRQVFLSTLACLCP 490 (510)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCC----------
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCC
Confidence 2 23344567788999999999999999999999999999999987543
No 20
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=99.94 E-value=1.4e-27 Score=253.98 Aligned_cols=210 Identities=20% Similarity=0.303 Sum_probs=143.3
Q ss_pred CccceehhhhccccccccCCCCcccchhhhhhhHHHHHHHHHhhhchHhhheeEeeccCCCCCccceeeecCCCCCCCCC
Q psy9472 1 LSADRFFAIVDPLRKLHSGIGGKRATRCTILIVAAIWIFAILCAIPSMTLSYVRAFKDDTNNNTLFESCYPFPPIDGYPN 80 (647)
Q Consensus 1 isidRy~aI~~P~~~~~~~y~~~~~~~~~~~~i~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~ 80 (647)
||+|||+||++|++ |..+++++++..+++++|++++++++|+++........... ...|...+.......
T Consensus 114 is~dRy~aI~~P~~-----~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~-----~~~C~~~~~~~~~~~ 183 (484)
T 3vw7_A 114 ISIDRFLAVVYPMQ-----SLSWRTLGRASFTCLAIWALAIAGVVPLLLKEQTIQVPGLG-----ITTCHDVLSETLLEG 183 (484)
T ss_dssp HHHHHHHHHHCCC----------CCHHHHHHHHHHHHHHHHHHHHHHHTSCCEEEETTTT-----EEEESSSCSSCSSCH
T ss_pred HHHHHheEEEcccc-----cccccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCC-----CceeeccCCccchhH
Confidence 58999999999999 77789999999999999999999999998776554333221 124877666544333
Q ss_pred CcchhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhccCCCCC-------------------------------C-------
Q psy9472 81 YPRTVIIMRFLIYYAVPLLIIACFYSLMARSLILSTKNMPG-------------------------------E------- 122 (647)
Q Consensus 81 ~~~~~~~~~~~~~~~~p~~ii~~~y~~i~~~~~~~~~~~~~-------------------------------~------- 122 (647)
+...|.+...++.+++|+++|+++|.+|++.++++.++... .
T Consensus 184 ~~~~~~~~~~~~~~~~P~~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ti~~~~~~~~~~~~~~~~~~ 263 (484)
T 3vw7_A 184 YYAYYFSAFSAVFFFVPLIISTVCYVSIIRCLSSSANIFEMLRIDEGLRLKIYKNTEGYYTIGIGHLLTKSPSLNAAKSE 263 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHCCEEEEEECTTSCEEEETTEEEESSSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhHhhHHHHhhhhccchhhhhccccccceeeeccccccCCcchhccccc
Confidence 33446677778889999999999999999999887641100 0
Q ss_pred --------------------------------------------------------------------------------
Q psy9472 123 -------------------------------------------------------------------------------- 122 (647)
Q Consensus 123 -------------------------------------------------------------------------------- 122 (647)
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 343 (484)
T 3vw7_A 264 LDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKR 343 (484)
T ss_dssp HHHHHTSCCSSBCCHHHHHHHHHHHHHHHHHHHHTCTTTHHHHTTSCHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTC
T ss_pred ccccccccCCCCCCcccccccccccccccccccccccccCcccccccccccchhhccccccCccccccchhhhhhhhccc
Confidence
Q ss_pred -----------c--------------------chhHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHhcCCCCCCh
Q psy9472 123 -----------L--------------------QGQTRQIRARKKVAKTVLTFVVVFAMCFFPQHFFFLWFYINPTAPDDY 171 (647)
Q Consensus 123 -----------~--------------------~~~~~~~~~~~k~~~~~~~i~~~f~~~~~P~~i~~~~~~~~~~~~~~~ 171 (647)
. .......++++|++||+++++++|++||+||+++.++..+...... .
T Consensus 344 ~~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~r~~k~l~~v~~~F~icwlP~~i~~l~~~~~~~~~~-~ 422 (484)
T 3vw7_A 344 WDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYANRSKKSRALFLSAAVFCIFIICFGPTNVLLIAHYSFLSHTS-T 422 (484)
T ss_dssp HHHHHHHHTTSHHHHHSHHHHHHHHHHHHHCSSHHHHCHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTCTTCT-T
T ss_pred hhhhhhhhhhhhhhccCcccccCccceeecchhccccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccc-c
Confidence 0 0000133567899999999999999999999999998876543222 2
Q ss_pred hhHHHHHHHHHHHHhhhhchhhHHHHHHhcHHHHHHHHHhhccccccccc
Q psy9472 172 NDFWHILRIVGFCLGFINSCINPIALYCVSGTFRKYFQKYLFCKMSSKII 221 (647)
Q Consensus 172 ~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~~~~~~~ 221 (647)
......+..++.+++++||++||+||++++++||++++++++|++.++..
T Consensus 423 ~~~~~~~~~~~~~L~~~ns~iNPiIY~~~~~~fR~~~~~ll~~~~~~~~~ 472 (484)
T 3vw7_A 423 TEAAYFAYLLCVCVSSISCCIDPLIYYYASSECQRYVYSILCCKESSDPS 472 (484)
T ss_dssp SHHHHHHHHHHHHHHTTHHHHHHHHHHHTSSCC-----------------
T ss_pred hhHHHHHHHHHHHHHHhccccchHHHHHhhHHHHHHHHHHHhhccCCCcc
Confidence 23345677789999999999999999999999999999999887665433
No 21
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=99.94 E-value=7.7e-26 Score=231.01 Aligned_cols=201 Identities=27% Similarity=0.449 Sum_probs=154.4
Q ss_pred CccceehhhhccccccccCCCCcccchhhhhhhHHHHHHHHHhhhchHhhheeEeeccCCCCCccceeeecCCCCCCCCC
Q psy9472 1 LSADRFFAIVDPLRKLHSGIGGKRATRCTILIVAAIWIFAILCAIPSMTLSYVRAFKDDTNNNTLFESCYPFPPIDGYPN 80 (647)
Q Consensus 1 isidRy~aI~~P~~~~~~~y~~~~~~~~~~~~i~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~ 80 (647)
||+|||+||++|++ |+ .+++++..+++++|++++++++|.++.......... ..|..+++......
T Consensus 126 isidRy~aI~~P~~-----~~--~~~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~-------~~C~~~~~~~~~~~ 191 (364)
T 2ks9_A 126 VAFDRYMAIIHPLQ-----PR--LSATATKVVICVIWVLALLLAFPQGYYSTTETMPSR-------VVCMIEWPEHPNKI 191 (364)
T ss_dssp HHHHHHHHHHCCCT-----TS--CCHHHHHHHHHHHHHHHHHHHTTTTTTSCCCBCTTC-------SSBCCCCSCCCTTT
T ss_pred HHHHHHHHHhhhcc-----cc--cccchHHHHHHHHHHHHHHHHhHHHHHhhheecCCC-------CEEeecCCCcchhH
Confidence 58999999999998 43 688889999999999999999988765433222111 12877665544444
Q ss_pred CcchhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCcchhHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHH
Q psy9472 81 YPRTVIIMRFLIYYAVPLLIIACFYSLMARSLILSTKNMPGELQGQTRQIRARKKVAKTVLTFVVVFAMCFFPQHFFFLW 160 (647)
Q Consensus 81 ~~~~~~~~~~~~~~~~p~~ii~~~y~~i~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~i~~~f~~~~~P~~i~~~~ 160 (647)
+...|.+...++.+++|+++++++|.+|.+.++++.+...... ...++.++++|++|++++++++|++||+|+.+..++
T Consensus 192 ~~~~~~~~~~~~~~~lp~~ii~~~y~~i~~~l~~~~~~~~~~~-~~~~~~~~~~k~~~~~~~v~~~f~~~~~P~~i~~~~ 270 (364)
T 2ks9_A 192 YEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDSSD-RYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLL 270 (364)
T ss_dssp THHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSCSCCCSSSSSS-CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcch-hhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777778888999999999999999999986554433222 233455678999999999999999999999999998
Q ss_pred HHhcCCCCCChhhHHHHHHHHHHHHhhhhchhhHHHHHHhcHHHHHHHHHhhcccccc
Q psy9472 161 FYINPTAPDDYNDFWHILRIVGFCLGFINSCINPIALYCVSGTFRKYFQKYLFCKMSS 218 (647)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~~~~ 218 (647)
..+....... .....+..+..+++++|+++||+||++++++||+++++.++|++++
T Consensus 271 ~~~~~~~~~~--~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~~~~~~ 326 (364)
T 2ks9_A 271 PYINPDLYLK--KFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFI 326 (364)
T ss_dssp HHHSTTSCSS--SCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHSSSCCC
T ss_pred HHhCcccchh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcCCC
Confidence 8776543211 1123455677889999999999999999999999999999876544
No 22
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=99.93 E-value=1.2e-25 Score=228.04 Aligned_cols=198 Identities=17% Similarity=0.302 Sum_probs=153.5
Q ss_pred CccceehhhhccccccccCCCCcccchhhhhhhHHHHHHHHHhhhchHhhheeEeeccCCCCCccceeeecCCCCCCCCC
Q psy9472 1 LSADRFFAIVDPLRKLHSGIGGKRATRCTILIVAAIWIFAILCAIPSMTLSYVRAFKDDTNNNTLFESCYPFPPIDGYPN 80 (647)
Q Consensus 1 isidRy~aI~~P~~~~~~~y~~~~~~~~~~~~i~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~ 80 (647)
||+|||+||++|++ |+. .+++++..+++++|++++++++|+++........... ..|..++.......
T Consensus 132 isidRy~aI~~P~~-----~~~-~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~------~~C~~~~~~~~~~~ 199 (349)
T 1u19_A 132 LAIERYVVVCKPMS-----NFR-FGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQ------CSCGIDYYTPHEET 199 (349)
T ss_dssp HHHHHHHHHTCCSS-----SCC-CCHHHHHHHHHHHHHHHHHHHSGGGTTSSCCEEETTT------TEEECCCSCCCGGG
T ss_pred HHHHHHheeeCCcc-----cee-eccchhHHHHHHHHHHHHHHHHHHHHheeeeeccCCc------eeecccccCccccc
Confidence 58999999999999 555 7889999999999999999999988754332222111 23776654433333
Q ss_pred CcchhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCcchhHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHH
Q psy9472 81 YPRTVIIMRFLIYYAVPLLIIACFYSLMARSLILSTKNMPGELQGQTRQIRARKKVAKTVLTFVVVFAMCFFPQHFFFLW 160 (647)
Q Consensus 81 ~~~~~~~~~~~~~~~~p~~ii~~~y~~i~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~i~~~f~~~~~P~~i~~~~ 160 (647)
....|.....++.+++|+++++++|.+|.+.++++.++.++ +.+..++++|+++++++++++|++||+|+.+..++
T Consensus 200 ~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~f~i~~~P~~i~~~~ 275 (349)
T 1u19_A 200 NNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQE----SATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFY 275 (349)
T ss_dssp THHHHHHHHHHHTTHHHHHHHHHHHTTTTTSSCSCCCSSCS----SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcc----chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh
Confidence 44667777788889999999999999999999876654332 23445677899999999999999999999999888
Q ss_pred HHhcCCCCCChhhHHHHHHHHHHHHhhhhchhhHHHHHHhcHHHHHHHHHhhccccccc
Q psy9472 161 FYINPTAPDDYNDFWHILRIVGFCLGFINSCINPIALYCVSGTFRKYFQKYLFCKMSSK 219 (647)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~~~~~ 219 (647)
.......... ..+..++.+++++|+++||++|++++++||+++++.++|++++.
T Consensus 276 ~~~~~~~~~~-----~~~~~~~~~l~~~ns~~nPiiY~~~~~~fR~~~~~~~~c~~~~~ 329 (349)
T 1u19_A 276 IFTHQGSDFG-----PIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPL 329 (349)
T ss_dssp HHHTTTSCCC-----HHHHHHHHHHGGGGGTHHHHHHHHTCHHHHHHHHHHHTSSCCCT
T ss_pred heecCCcccc-----hHHHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHHhcccCCCC
Confidence 7765433222 23556788899999999999999999999999999998765543
No 23
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=99.93 E-value=2.4e-26 Score=244.64 Aligned_cols=199 Identities=23% Similarity=0.324 Sum_probs=144.2
Q ss_pred CccceehhhhccccccccCCCCcccchhhhhhhHHHHHHHHHhhhchHhhheeEeeccCCCCCccceeeecCCCCCCCCC
Q psy9472 1 LSADRFFAIVDPLRKLHSGIGGKRATRCTILIVAAIWIFAILCAIPSMTLSYVRAFKDDTNNNTLFESCYPFPPIDGYPN 80 (647)
Q Consensus 1 isidRy~aI~~P~~~~~~~y~~~~~~~~~~~~i~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~ 80 (647)
||+|||+||++|++ |..+++++++..+++++|++++++++++++..+..... .....|...+.... ..
T Consensus 134 isidRy~aI~~Pl~-----~~~~~t~~~~~~~i~~~W~~s~~~~~~p~~~~~~~~~~------~~~~~c~~~~~~~~-~~ 201 (500)
T 2rh1_A 134 IAVDRYFAITSPFK-----YQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATH------QEAINCYAEETCCD-FF 201 (500)
T ss_dssp HHHHHHHHHHSSST-----TSCSSCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCS------HHHHHHHHCTTCCC-CC
T ss_pred HHHHHHHHeeccCc-----CCeeecccceeehhhHHHHHHHHHHhcchheeeecccc------cCcceecccccccc-cc
Confidence 58999999999999 77789999999999999999999986544332211110 01112544332211 22
Q ss_pred CcchhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhccCC---------------C--CCCc--------------------
Q psy9472 81 YPRTVIIMRFLIYYAVPLLIIACFYSLMARSLILSTKN---------------M--PGEL-------------------- 123 (647)
Q Consensus 81 ~~~~~~~~~~~~~~~~p~~ii~~~y~~i~~~~~~~~~~---------------~--~~~~-------------------- 123 (647)
....|.+...++.|++|+++|+++|.+|++.++++.++ . ..+.
T Consensus 202 ~~~~y~~~~~~~~~~iPl~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (500)
T 2rh1_A 202 TNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSE 281 (500)
T ss_dssp CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHTCCEEEEEECTTSCEEEETTEEEESCSCHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccccccCCCCCCCCCCcccccccccc
Confidence 34667777888889999999999999999999876554 0 0000
Q ss_pred -----------------------ch----------------------------------------------hHH------
Q psy9472 124 -----------------------QG----------------------------------------------QTR------ 128 (647)
Q Consensus 124 -----------------------~~----------------------------------------------~~~------ 128 (647)
+. ..+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (500)
T 2rh1_A 282 LDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKR 361 (500)
T ss_dssp HHHHHTSCCTTBCCHHHHHHHHHHHHHHHHHHHHHCTTTHHHHHHSCHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHTTC
T ss_pred cccccCCCCCCccchhhhhhcccCCccccccccccCCCCCCCCCcccccccchhhcccCCCCccccccccCchhhhhccc
Confidence 00 000
Q ss_pred -------------------------------------HHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHhcCCCCCCh
Q psy9472 129 -------------------------------------QIRARKKVAKTVLTFVVVFAMCFFPQHFFFLWFYINPTAPDDY 171 (647)
Q Consensus 129 -------------------------------------~~~~~~k~~~~~~~i~~~f~~~~~P~~i~~~~~~~~~~~~~~~ 171 (647)
..++|+|++|++++++++|++||+||++..++..+.....
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ka~ktl~ivv~~F~icWlP~~i~~l~~~~~~~~~--- 438 (500)
T 2rh1_A 362 WDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLI--- 438 (500)
T ss_dssp HHHHHHHHTTSHHHHHSHHHHHHHHHHHHHSSSGGGTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSS---
T ss_pred ccccccccccccccCCCCcccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcc---
Confidence 0026789999999999999999999999999988863221
Q ss_pred hhHHHHHHHHHHHHhhhhchhhHHHHHHhcHHHHHHHHHhhcccccc
Q psy9472 172 NDFWHILRIVGFCLGFINSCINPIALYCVSGTFRKYFQKYLFCKMSS 218 (647)
Q Consensus 172 ~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~~~~ 218 (647)
...+..+..+|+++||++||+||++ +++||++++++++|++++
T Consensus 439 ---~~~~~~~~~~L~y~NS~iNPiIY~~-n~~FR~af~~il~~~~~~ 481 (500)
T 2rh1_A 439 ---RKEVYILLNWIGYVNSGFNPLIYCR-SPDFRIAFQELLCLRRSS 481 (500)
T ss_dssp ---CHHHHHHHHHHHHHGGGTHHHHGGG-SHHHHHHHHHHTTC----
T ss_pred ---cHHHHHHHHHHHHHHHhhcchhhhc-cHHHHHHHHHHHhhhccC
Confidence 1456678899999999999999985 999999999999876544
No 24
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=99.92 E-value=7.9e-26 Score=240.71 Aligned_cols=209 Identities=18% Similarity=0.233 Sum_probs=152.3
Q ss_pred CccceehhhhccccccccCCCCcccchhhhhhhHHHHHHHHHhhhchHhhheeEeeccCCCCCccceeeecCCCCC--CC
Q psy9472 1 LSADRFFAIVDPLRKLHSGIGGKRATRCTILIVAAIWIFAILCAIPSMTLSYVRAFKDDTNNNTLFESCYPFPPID--GY 78 (647)
Q Consensus 1 isidRy~aI~~P~~~~~~~y~~~~~~~~~~~~i~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~--~~ 78 (647)
||+|||+||++|++ |..+++++++..+++++|++++++++|+++.+.......... .....|...+... ..
T Consensus 113 is~dRy~aI~~P~~-----~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~--~~~~~c~~~~~~~~~~~ 185 (488)
T 3eml_A 113 IAIDRYIAIRIPLR-----YNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGK--NHSQGCGEGQVACLFED 185 (488)
T ss_dssp HHHHHHHHHSCGGG-----STTTSCHHHHHHHHHHHHHHHHHHHTTGGGTCCSSCC---------CCSSCTTCEECCHHH
T ss_pred HHHHhheeEecccc-----cccccCHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccc--ccccccccccceeeccc
Confidence 58999999999999 777899999999999999999999998887554322211111 0111243322111 11
Q ss_pred CCCcchhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCc-----------------------------------
Q psy9472 79 PNYPRTVIIMRFLIYYAVPLLIIACFYSLMARSLILSTKNMPGEL----------------------------------- 123 (647)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~p~~ii~~~y~~i~~~~~~~~~~~~~~~----------------------------------- 123 (647)
......+.+..+++.+++|+++|+++|.+|++.++++.++.....
T Consensus 186 ~~~~~~~~~~~~~~~~~~P~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (488)
T 3eml_A 186 VVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAK 265 (488)
T ss_dssp HSCHHHHHTTTHHHHTHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHTCCEEEEEECTTSCEEEETTEEEESSSCHHHHH
T ss_pred cccchhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhccccccchhhccccccceeccccccCCCCccccccc
Confidence 112244556667888999999999999999999987654321000
Q ss_pred --------------------------------------------------------------------------------
Q psy9472 124 -------------------------------------------------------------------------------- 123 (647)
Q Consensus 124 -------------------------------------------------------------------------------- 123 (647)
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (488)
T 3eml_A 266 SELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQ 345 (488)
T ss_dssp HHHHHHHTSCCTTBCCHHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHSCHHHHHHHHHHHHHHCHHHHTTCHHHHHHHHT
T ss_pred cccccCCCCCCCCCCChhhhccCcccCccccccccCCCCCCCCCcCCcchHHHhhhhccccCCCCCCccCCCCcchhhhh
Confidence
Q ss_pred -----------------------------------chhHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHhcCCCC
Q psy9472 124 -----------------------------------QGQTRQIRARKKVAKTVLTFVVVFAMCFFPQHFFFLWFYINPTAP 168 (647)
Q Consensus 124 -----------------------------------~~~~~~~~~~~k~~~~~~~i~~~f~~~~~P~~i~~~~~~~~~~~~ 168 (647)
....+..++|+|+++++++++++|++||+||+++.++..+.....
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~~iv~~F~icw~P~~i~~~~~~~~~~~~ 425 (488)
T 3eml_A 346 KRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYRSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCS 425 (488)
T ss_dssp TCHHHHHHHHTTSHHHHHCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSC
T ss_pred ccccccccCcccccCcccccchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccCccc
Confidence 001122467899999999999999999999999999988865432
Q ss_pred CChhhHHHHHHHHHHHHhhhhchhhHHHHHHhcHHHHHHHHHhhcccccccc
Q psy9472 169 DDYNDFWHILRIVGFCLGFINSCINPIALYCVSGTFRKYFQKYLFCKMSSKI 220 (647)
Q Consensus 169 ~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~~~~~~ 220 (647)
. ....+..++.+++++|+++||+||++++++||++++++++|+.+++.
T Consensus 426 ~----~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~l~~~~~~~~~ 473 (488)
T 3eml_A 426 H----APLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQQ 473 (488)
T ss_dssp C----CCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTTSCC-
T ss_pred c----ccHHHHHHHHHHHHHHhhhchhhhhhcCHHHHHHHHHHHhhcccccC
Confidence 2 12456678889999999999999999999999999999987665543
No 25
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=99.92 E-value=1.6e-25 Score=223.79 Aligned_cols=200 Identities=22% Similarity=0.314 Sum_probs=146.5
Q ss_pred CccceehhhhccccccccCCCCcccchhhhhhhHHHHHHHHHhhhchHhhheeEeeccCCCCCccceeeecCCCCCCCCC
Q psy9472 1 LSADRFFAIVDPLRKLHSGIGGKRATRCTILIVAAIWIFAILCAIPSMTLSYVRAFKDDTNNNTLFESCYPFPPIDGYPN 80 (647)
Q Consensus 1 isidRy~aI~~P~~~~~~~y~~~~~~~~~~~~i~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~ 80 (647)
||+|||+||++|++ |+.+.+++++..+++++|+.++++++|+++......... ....|..+....+ ..
T Consensus 105 isidRy~aI~~P~~-----~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~------~~~~c~~~~~~~~-~~ 172 (315)
T 4amj_A 105 IAIDRYLAITSPFR-----YQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDP------QALKCYQDPGCCD-FV 172 (315)
T ss_dssp HHHHHHHHHHCHHH-----HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSH------HHHHHHHCTTCCC-CC
T ss_pred HHHHHHhhcccccc-----cccccchhhHHHhhhHHHHHHHHHHHHHHHHHhccccCC------Cccccccccccch-hh
Confidence 58999999999999 656789999999999999999999988776543221111 1122554433222 22
Q ss_pred CcchhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCcc--hhHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHH
Q psy9472 81 YPRTVIIMRFLIYYAVPLLIIACFYSLMARSLILSTKNMPGELQ--GQTRQIRARKKVAKTVLTFVVVFAMCFFPQHFFF 158 (647)
Q Consensus 81 ~~~~~~~~~~~~~~~~p~~ii~~~y~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~k~~~~~~~i~~~f~~~~~P~~i~~ 158 (647)
....|.....++.+++|+++++++|.+|++.++++.++.++..+ .+.+..++|+|+++++++++++|++||+|+.+..
T Consensus 173 ~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~f~i~~~P~~i~~ 252 (315)
T 4amj_A 173 TNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASKRKTSRVMLMREHKALKTLGIIMGVFTLCWLPFFLVN 252 (315)
T ss_dssp CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHTC------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34677778888889999999999999999999887665443322 2333455789999999999999999999999999
Q ss_pred HHHHhcCCCCCChhhHHHHHHHHHHHHhhhhchhhHHHHHHhcHHHHHHHHHhhccccccc
Q psy9472 159 LWFYINPTAPDDYNDFWHILRIVGFCLGFINSCINPIALYCVSGTFRKYFQKYLFCKMSSK 219 (647)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~~~~~ 219 (647)
++..+...... .....+..+++++||++||++|+ ++++||++++++++|++.++
T Consensus 253 ~~~~~~~~~~~------~~~~~~~~~l~~~ns~~nPiiY~-~~~~fR~~~~~~l~~~~~~~ 306 (315)
T 4amj_A 253 IVNVFNRDLVP------DWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLAFPRKAD 306 (315)
T ss_dssp HHHHHCTTSSC------HHHHHHHHHHHHHGGGTHHHHGG-GSHHHHHHHHHHHC------
T ss_pred HHHHhcCccch------HHHHHHHHHHHHHhccccHHHHc-CcHHHHHHHHHHhCCCCcch
Confidence 98887654322 34556778899999999999999 99999999999998865544
No 26
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=99.91 E-value=1.1e-24 Score=227.60 Aligned_cols=198 Identities=25% Similarity=0.417 Sum_probs=140.8
Q ss_pred CccceehhhhccccccccCCCCcccchhhhhhhHHHHHHHHHhhhchHhhheeEeeccCCCCCccceeeecCCCCCCCCC
Q psy9472 1 LSADRFFAIVDPLRKLHSGIGGKRATRCTILIVAAIWIFAILCAIPSMTLSYVRAFKDDTNNNTLFESCYPFPPIDGYPN 80 (647)
Q Consensus 1 isidRy~aI~~P~~~~~~~y~~~~~~~~~~~~i~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~ 80 (647)
||+|||+||++|++ |+.+++++++..+++++|++++++++|.++.......... ..|...+.... ..
T Consensus 218 isidRy~aI~~Pl~-----~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~-------~~c~~~~~~~~-~~ 284 (434)
T 4ea3_A 218 MSVDRYVAICHPIR-----ALDVRTSSKAQAVNVAIWALASVVGVPVAIMGSAQVEDEE-------IECLVEIPTPQ-DY 284 (434)
T ss_dssp HHHHHHHHHHCC------------CHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCSSC-------CCEEECCCSSH-HH
T ss_pred HHHHHHhEEEcccc-----cccccchhhhHHhhhhhhhHHHHHHhhHheeeeeEeecCc-------eeEEEecCChH-hH
Confidence 58999999999999 7778999999999999999999999998875543322211 12765544322 12
Q ss_pred CcchhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCcchhHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHH
Q psy9472 81 YPRTVIIMRFLIYYAVPLLIIACFYSLMARSLILSTKNMPGELQGQTRQIRARKKVAKTVLTFVVVFAMCFFPQHFFFLW 160 (647)
Q Consensus 81 ~~~~~~~~~~~~~~~~p~~ii~~~y~~i~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~i~~~f~~~~~P~~i~~~~ 160 (647)
+...|.+...++.+++|+++++++|.+|++.++++++... +.++.++++|+++++++++++|++||+|+.+..++
T Consensus 285 ~~~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~~~-----~~~~~~~~~~~~~~~~~vv~~F~i~w~P~~i~~~~ 359 (434)
T 4ea3_A 285 WGPVFAICIFLFSFIVPVLVISVCYSLMIRRLRGVRLLSG-----SREKDRNLRRITRLVLVVVAVFVGCWTPVQVFVLA 359 (434)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCSSCSS-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc-----chhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2345667778888999999999999999999986554322 33455678899999999999999999999999988
Q ss_pred HHhcCCCCCChhhHHHHHHHHHHHHhhhhchhhHHHHHHhcHHHHHHHHHhhccccccc
Q psy9472 161 FYINPTAPDDYNDFWHILRIVGFCLGFINSCINPIALYCVSGTFRKYFQKYLFCKMSSK 219 (647)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~~~~~ 219 (647)
..+...... .....+..++.+++++|+++||+||++++++||++++++++|++.++
T Consensus 360 ~~~~~~~~~---~~~~~~~~~~~~l~~~ns~lNPiIY~~~~~~fR~~~~~~~~~~~~~~ 415 (434)
T 4ea3_A 360 QGLGVQPSS---ETAVAILRFCTALGYVNSCLNPILYAFLDENFKACFRKFCCASALGR 415 (434)
T ss_dssp HHTTCCCCS---HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHC----------
T ss_pred HHhccCCch---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCC
Confidence 776543322 22244556777889999999999999999999999999887765444
No 27
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=99.91 E-value=4.4e-26 Score=239.77 Aligned_cols=209 Identities=19% Similarity=0.266 Sum_probs=147.8
Q ss_pred CccceehhhhccccccccCCCCcccchhhhhhhHHHHHHHHHhhhchHhhheeEeeccCCCCCccceeeecCCCCC--CC
Q psy9472 1 LSADRFFAIVDPLRKLHSGIGGKRATRCTILIVAAIWIFAILCAIPSMTLSYVRAFKDDTNNNTLFESCYPFPPID--GY 78 (647)
Q Consensus 1 isidRy~aI~~P~~~~~~~y~~~~~~~~~~~~i~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~--~~ 78 (647)
||+|||+||++|++ |..+++++++..+++++|++++++++|+++.+........ .......|...+... ..
T Consensus 123 is~dRy~aI~~P~~-----~~~~~~~~~~~~~i~~~Wi~s~~~~~~~~~~~~~~~~~~~--~~~~~~~c~~~~~~~~~~~ 195 (447)
T 4eiy_A 123 IAIDRYIAIRIPLR-----YNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKE--GKNHSQGCGEGQVACLFED 195 (447)
T ss_dssp HHHHHHHHHHCHHH-----HHHHSCHHHHHHHHHHHHHHHHHHHTGGGGTCSSTTSCCH--HHHHHTTCCTTEEECCHHH
T ss_pred HHHHHHeEEecccc-----cchhhhHHHHHHHHhHHHHHHHHHHHhhhheeccccccCc--cccccccccccchhhcccc
Confidence 58999999999999 6668999999999999999999999988875432111100 000001132211100 01
Q ss_pred CCCcchhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhccCCCCCC------------------------------------
Q psy9472 79 PNYPRTVIIMRFLIYYAVPLLIIACFYSLMARSLILSTKNMPGE------------------------------------ 122 (647)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~p~~ii~~~y~~i~~~~~~~~~~~~~~------------------------------------ 122 (647)
......+.+..+++.+++|+++++++|.+|++.++++.++..++
T Consensus 196 ~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (447)
T 4eiy_A 196 VVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLADLEDNWETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQK 275 (447)
T ss_dssp HSCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHHHC
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHhccCcCcCCccccchhhhccchhhhccCCCCCC
Confidence 11124455555677889999999999999999998764322110
Q ss_pred ---------------------------------------------------------------cchhHHHHHHHhHhHHH
Q psy9472 123 ---------------------------------------------------------------LQGQTRQIRARKKVAKT 139 (647)
Q Consensus 123 ---------------------------------------------------------------~~~~~~~~~~~~k~~~~ 139 (647)
.+...+..++|+|++|+
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~k~ 355 (447)
T 4eiy_A 276 ATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLERARSTLQKEVHAAKS 355 (447)
T ss_dssp ---------------CHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTHHHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCcCCCCCCcccccccCCCCCCCCccchhhhhcccCCcCcccchhhhhcccccchhhccccchhHHHHHHHHHHHH
Confidence 00112234678899999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHhcCCCCCChhhHHHHHHHHHHHHhhhhchhhHHHHHHhcHHHHHHHHHhhccccccc
Q psy9472 140 VLTFVVVFAMCFFPQHFFFLWFYINPTAPDDYNDFWHILRIVGFCLGFINSCINPIALYCVSGTFRKYFQKYLFCKMSSK 219 (647)
Q Consensus 140 ~~~i~~~f~~~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~~~~~ 219 (647)
+++++++|++||+|+.+..++..+...... ....+..++.+++++||++||+||++++++||++++++++|+.+++
T Consensus 356 l~~vv~~F~icw~P~~i~~~~~~~~~~~~~----~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~~~~~~~r~ 431 (447)
T 4eiy_A 356 LAIIVGLFALCWLPLHIINCFTFFCPDCSH----APLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQ 431 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTC---
T ss_pred HHHhhhhhheeccHHHHHHHHHHhcCcccc----cchHHHHHHHHHHHHHhccchhhhHhccHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999998887653221 1245667889999999999999999999999999999998776554
Q ss_pred c
Q psy9472 220 I 220 (647)
Q Consensus 220 ~ 220 (647)
.
T Consensus 432 ~ 432 (447)
T 4eiy_A 432 Q 432 (447)
T ss_dssp -
T ss_pred C
Confidence 3
No 28
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=99.91 E-value=2.8e-25 Score=235.09 Aligned_cols=198 Identities=22% Similarity=0.370 Sum_probs=147.2
Q ss_pred CccceehhhhccccccccCCCCcccchhhhhhhHHHHHHHHHhhhchHhhheeEeeccCCCCCccceeeecCCCCCCCCC
Q psy9472 1 LSADRFFAIVDPLRKLHSGIGGKRATRCTILIVAAIWIFAILCAIPSMTLSYVRAFKDDTNNNTLFESCYPFPPIDGYPN 80 (647)
Q Consensus 1 isidRy~aI~~P~~~~~~~y~~~~~~~~~~~~i~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~ 80 (647)
||+|||+||++|++ |..+.+++++..+++++|++++++++|+++.+........... ..|...+.
T Consensus 117 isidRy~ai~~P~~-----~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~----~~C~~~~~------ 181 (467)
T 3uon_A 117 ISFDRYFCVTKPLT-----YPVKRTTKMAGMMIAAAWVLSFILWAPAILFWQFIVGVRTVED----GECYIQFF------ 181 (467)
T ss_dssp HHHHHHHHHHCTTT-----SGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCS----SCCCCGGG------
T ss_pred HHHHHHHHhhcccc-----cccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCC----CcceeecC------
Confidence 58999999999999 7778999999999999999999999998876543211111111 12654432
Q ss_pred CcchhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhccCCCCCC--------------------------------------
Q psy9472 81 YPRTVIIMRFLIYYAVPLLIIACFYSLMARSLILSTKNMPGE-------------------------------------- 122 (647)
Q Consensus 81 ~~~~~~~~~~~~~~~~p~~ii~~~y~~i~~~~~~~~~~~~~~-------------------------------------- 122 (647)
....|.+...++.+++|+++++++|.+|++.++++.+.....
T Consensus 182 ~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (467)
T 3uon_A 182 SNAAVTFGTAIAAFYLPVIIMTVLYWHISRASKSRINIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSE 261 (467)
T ss_dssp GSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHSCCEEEEEECTTSCEEEETTEECCCCSSHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhhcccccceeeccchhhcccccCcccccCCcccccccc
Confidence 124577777888899999999999999999998875411000
Q ss_pred ---------c---c------------------------------------------------------------------
Q psy9472 123 ---------L---Q------------------------------------------------------------------ 124 (647)
Q Consensus 123 ---------~---~------------------------------------------------------------------ 124 (647)
. .
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (467)
T 3uon_A 262 LDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKR 341 (467)
T ss_dssp HHHHHSSCCTTBCCHHHHHHHHHHHHHHHHHHHHTCTTTHHHHHHSCHHHHHHHHHHHHHHHHHHHGGGHHHHHHHHTTC
T ss_pred cccccccCCCCcccccccccccccccchhhcccccCCCCCccccccccccccccccceeeccccCCCccccccchhhhcC
Confidence 0 0
Q ss_pred ----------------hhHHH-----------------HHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHhcCCCCCCh
Q psy9472 125 ----------------GQTRQ-----------------IRARKKVAKTVLTFVVVFAMCFFPQHFFFLWFYINPTAPDDY 171 (647)
Q Consensus 125 ----------------~~~~~-----------------~~~~~k~~~~~~~i~~~f~~~~~P~~i~~~~~~~~~~~~~~~ 171 (647)
...+. .++|+|+++++++++++|++||+||.+..++..+......
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~~~~~-- 419 (467)
T 3uon_A 342 WDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYPPPSREKKVTRTILAILLAFIITWAPYNVMVLINTFCAPCIP-- 419 (467)
T ss_dssp HHHHHHHHTTSHHHHHSHHHHHHHHHHHHHSSSTTSCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTSC--
T ss_pred ccccccccccccccCCCCcccccccchhhcccccccccchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhcccc--
Confidence 00000 0257899999999999999999999999999887653221
Q ss_pred hhHHHHHHHHHHHHhhhhchhhHHHHHHhcHHHHHHHHHhhccccccc
Q psy9472 172 NDFWHILRIVGFCLGFINSCINPIALYCVSGTFRKYFQKYLFCKMSSK 219 (647)
Q Consensus 172 ~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~~~~~ 219 (647)
..+..++.+++++|+++||+||++++++||++++++++|++++.
T Consensus 420 ----~~~~~i~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~c~~~~~ 463 (467)
T 3uon_A 420 ----NTVWTIGYWLCYINSTINPACYALCNATFKKTFKHLLMCHYKNI 463 (467)
T ss_dssp ----HHHHHHHHHHHHHTTTHHHHHHHHHCHHHHHHHHHHCC------
T ss_pred ----hHHHHHHHHHHHHhhhhhhHHHHHcCHHHHHHHHHHHhhhccCC
Confidence 45667888999999999999999999999999999998775543
No 29
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=99.91 E-value=1.6e-24 Score=214.28 Aligned_cols=189 Identities=20% Similarity=0.364 Sum_probs=141.4
Q ss_pred CccceehhhhccccccccCCCCcccchhhhhhhHHHHHHHHHhhhchHhhheeEeeccCCCCCccceeeecCCCCCCCCC
Q psy9472 1 LSADRFFAIVDPLRKLHSGIGGKRATRCTILIVAAIWIFAILCAIPSMTLSYVRAFKDDTNNNTLFESCYPFPPIDGYPN 80 (647)
Q Consensus 1 isidRy~aI~~P~~~~~~~y~~~~~~~~~~~~i~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~ 80 (647)
||+|||+||++|++ |+.. .++++..+++++|+.++++++|+.............. .|..... .....
T Consensus 103 isidRy~aI~~P~~-----~~~~-~~~~~~~~~~~~W~~s~~~~~p~~~~~~~~~~~~~~~------~~~~~~~-~~~~~ 169 (296)
T 2lnl_A 103 ISVDRYLAIVHATR-----TLTQ-KRHLVKFVCLGCWGLSMNLSLPFFLFRQAYHPNNSSP------VCYEVLG-NDTAK 169 (296)
T ss_dssp HHHHHHHHSSSCSS-----SSCC-HHHHHHHHHHHHHHHHHHHHHHHHHTSSCCCCCTTSC------CCCSCCS-CCTTT
T ss_pred HHhhhhhhhhhccc-----cchh-hhhhhHheehHHHHHHHHHhcchhhcceeecCCCCCc------eeeeecc-ccchh
Confidence 58999999999999 5444 4466777888999999999999887654433222111 1222111 22223
Q ss_pred CcchhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCcchhHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHH
Q psy9472 81 YPRTVIIMRFLIYYAVPLLIIACFYSLMARSLILSTKNMPGELQGQTRQIRARKKVAKTVLTFVVVFAMCFFPQHFFFLW 160 (647)
Q Consensus 81 ~~~~~~~~~~~~~~~~p~~ii~~~y~~i~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~i~~~f~~~~~P~~i~~~~ 160 (647)
....+.+....+.+++|+.++.++|.++.+.++++.+ ++|+|++|++..++++|++||+|+++..++
T Consensus 170 ~~~~~~~~~~~~~~~~p~~i~~~~y~~i~~~~~~~~~-------------~~~~k~~~~~~~v~~~f~icw~P~~i~~~~ 236 (296)
T 2lnl_A 170 WRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKAHM-------------GQKHRAMRVIFAVVLIFLLCWLPYNLVLLA 236 (296)
T ss_dssp TTTHHHHTTTHHHHHHHHHHHHHHHHHHTTTSSSCCC-------------HHHHTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------------hhhhhHHHHHHHhhhheeeeehHHHHHHHH
Confidence 3456777778888999999999999988876653221 356789999999999999999999999998
Q ss_pred HHhcCCCCCC----hhhHHHHHHHHHHHHhhhhchhhHHHHHHhcHHHHHHHHHhhccc
Q psy9472 161 FYINPTAPDD----YNDFWHILRIVGFCLGFINSCINPIALYCVSGTFRKYFQKYLFCK 215 (647)
Q Consensus 161 ~~~~~~~~~~----~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~ 215 (647)
..+......+ .......+..++.+++++||++||++|++++++||++++|+++|+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~ll~cr 295 (296)
T 2lnl_A 237 DTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFRHGFLKILAMH 295 (296)
T ss_dssp HHHTCSSSCSCHHHHHHHTTHHHHHHHHHGGGGGTHHHHHHHHHCSHHHHHHHHHHHHC
T ss_pred HHHhccccCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCC
Confidence 8876543221 112223456678899999999999999999999999999999875
No 30
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=99.91 E-value=1.1e-25 Score=240.40 Aligned_cols=204 Identities=20% Similarity=0.302 Sum_probs=156.1
Q ss_pred CccceehhhhccccccccCCCCcccchhhhhhhHHHHHHHHHhhhchHhhheeEeeccCCCCCccceeeecCCCCCCCCC
Q psy9472 1 LSADRFFAIVDPLRKLHSGIGGKRATRCTILIVAAIWIFAILCAIPSMTLSYVRAFKDDTNNNTLFESCYPFPPIDGYPN 80 (647)
Q Consensus 1 isidRy~aI~~P~~~~~~~y~~~~~~~~~~~~i~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~ 80 (647)
||+|||+||++|++ |....+++++..+++++|++++++++|+++........+. ..|...++.. .
T Consensus 140 is~dRy~ai~~P~~-----~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~-------~~C~~~~~~~---~ 204 (502)
T 3odu_A 140 ISLDRYLAIVHATN-----SQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVSEADDR-------YICDRFYPND---L 204 (502)
T ss_dssp HHHHHHHHHHCTTS-----CHHHHHHHHHTHHHHHTHHHHHHTTHHHHHHEEEEECSSS-------EEEEECCSSH---H
T ss_pred HHHHHHhheecccc-----cccccchhHHHHhhhHHHHHHHHHHHHHHHheeeeccCCc-------eEEeecCCch---h
Confidence 58999999999999 6668999999999999999999999999876654433221 2377554332 2
Q ss_pred CcchhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhccCCCCCC-------c------------------------------
Q psy9472 81 YPRTVIIMRFLIYYAVPLLIIACFYSLMARSLILSTKNMPGE-------L------------------------------ 123 (647)
Q Consensus 81 ~~~~~~~~~~~~~~~~p~~ii~~~y~~i~~~~~~~~~~~~~~-------~------------------------------ 123 (647)
+...|.+...++.+++|+++|+++|.+|++.++++.++..+. +
T Consensus 205 ~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (502)
T 3odu_A 205 WVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSGSNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKS 284 (502)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHGGGCSCCHHHHHHHHTCCEEEEEECTTSCEEEETTEEEECSSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhccccccccCCCccccccccccccCcCccccccch
Confidence 345566777788899999999999999999999865542100 0
Q ss_pred --------------------------------------------------------------------------------
Q psy9472 124 -------------------------------------------------------------------------------- 123 (647)
Q Consensus 124 -------------------------------------------------------------------------------- 123 (647)
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (502)
T 3odu_A 285 ELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQK 364 (502)
T ss_dssp HHHHHHTSCCTTBCCHHHHHHHHHHHHHHHHHHHTTCTTTHHHHHTCCHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHT
T ss_pred hhhcccCcchhhhhhccccccchhhcccccccccccCccccccccCCCCCCcchhhhhhhhhchhhcccCccccchhhhc
Confidence
Q ss_pred ----------------------------------chhHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHhcCCC--
Q psy9472 124 ----------------------------------QGQTRQIRARKKVAKTVLTFVVVFAMCFFPQHFFFLWFYINPTA-- 167 (647)
Q Consensus 124 ----------------------------------~~~~~~~~~~~k~~~~~~~i~~~f~~~~~P~~i~~~~~~~~~~~-- 167 (647)
+....+.++|+|+++++++++++|++||+||.++.++..+....
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~k~~k~l~~vv~~F~icw~P~~i~~~~~~~~~~~~~ 444 (502)
T 3odu_A 365 RWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGSKGHQKRKALKTTVILILAFFACWLPYYIGISIDSFILLEII 444 (502)
T ss_dssp CHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHCSSHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSS
T ss_pred hhhhhccccccccccccCcchhhhccccccccccchhhhhhHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhh
Confidence 00001234579999999999999999999999999887764221
Q ss_pred --CCChhhHHHHHHHHHHHHhhhhchhhHHHHHHhcHHHHHHHHHhhccccccc
Q psy9472 168 --PDDYNDFWHILRIVGFCLGFINSCINPIALYCVSGTFRKYFQKYLFCKMSSK 219 (647)
Q Consensus 168 --~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~~~~~ 219 (647)
..........+..++.+++++||++||+||++++++||++++++++|+++..
T Consensus 445 ~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~~~~~~~ 498 (502)
T 3odu_A 445 KQGCEFENTVHKWISITEALAFFHCCLNPILYAFLGAKFKTSAQHALTSGRPLE 498 (502)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTTTCCCCCCHHHHHSSCSSCG
T ss_pred hhccccccchHHHHHHHHHHHHHhcccchhhhhhcCHHHHHHHHHHhccCCchh
Confidence 1122334456667899999999999999999999999999999998876554
No 31
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=99.91 E-value=1.7e-24 Score=231.31 Aligned_cols=195 Identities=16% Similarity=0.258 Sum_probs=136.2
Q ss_pred CccceehhhhccccccccCCCCcccchhhhhhhHHHHHHHHHhhhchHhhheeEeeccCCCCCccceeeecCCCCCCCCC
Q psy9472 1 LSADRFFAIVDPLRKLHSGIGGKRATRCTILIVAAIWIFAILCAIPSMTLSYVRAFKDDTNNNTLFESCYPFPPIDGYPN 80 (647)
Q Consensus 1 isidRy~aI~~P~~~~~~~y~~~~~~~~~~~~i~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~ 80 (647)
||+|||+||+ |++ |..+++++++..+++++|++++++++|+++.+... .+ ...|...++.
T Consensus 156 isidRy~aI~-p~~-----~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~--~~-------~~~C~~~~~~----- 215 (520)
T 3v2y_A 156 IAIERYITML-KMK-----LHNGSNNFRLFLLISACWVISLILGGLPIMGWNCI--SA-------LSSCSTVLPL----- 215 (520)
T ss_dssp HHHHHHHHHC-C------------CCHHHHHHHHHHHHHHHHHHHTTTTTCBCT--TC-------GGGBCSSSTT-----
T ss_pred HHHHHhhEEe-ccc-----cccccchhHHHHHHHHHHHHHHHHHHHHHHeeccc--cC-------CCcccccCCc-----
Confidence 5899999999 999 77789999999999999999999999888755432 11 1138765432
Q ss_pred CcchhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhcc----------CCCC-----C--------Cc--------------
Q psy9472 81 YPRTVIIMRFLIYYAVPLLIIACFYSLMARSLILST----------KNMP-----G--------EL-------------- 123 (647)
Q Consensus 81 ~~~~~~~~~~~~~~~~p~~ii~~~y~~i~~~~~~~~----------~~~~-----~--------~~-------------- 123 (647)
....|.+ ..++.|++|+++|+++|.+|++.++++. .+.. . +.
T Consensus 216 ~~~~~~~-~~~~~~~lPl~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~t~~~g~~~~~~~~~~~~~~~~ 294 (520)
T 3v2y_A 216 YHKHYIL-FCTTVFTLLLLSIVILYCRIYSLVRTRNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSEL 294 (520)
T ss_dssp BBHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCSSCEECSSSSEEETTTEECCSSSCHHHHHHHH
T ss_pred cchHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhhhhhhccccccceeEecccccccccccccccchh
Confidence 2234443 4556699999999999999999998764 0000 0 00
Q ss_pred --------------------------------------------------------------------c-----------
Q psy9472 124 --------------------------------------------------------------------Q----------- 124 (647)
Q Consensus 124 --------------------------------------------------------------------~----------- 124 (647)
+
T Consensus 295 ~~~~g~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 374 (520)
T 3v2y_A 295 DKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRW 374 (520)
T ss_dssp HHHHTSCCTTCCCHHHHHHHHHHHHHHHHHHHTTCTTTHHHHHHSCHHHHHHHHHHHHHSCHHHHHTCHHHHHHHHTTCH
T ss_pred hhHHHHhcCCcccHHHhhhHHHhccccccccccccccCCCcCCccchhhhHHHHHHHHccCCCcccccccccccccccch
Confidence 0
Q ss_pred --------------hhH-HH------------------HHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHhcCCCCCCh
Q psy9472 125 --------------GQT-RQ------------------IRARKKVAKTVLTFVVVFAMCFFPQHFFFLWFYINPTAPDDY 171 (647)
Q Consensus 125 --------------~~~-~~------------------~~~~~k~~~~~~~i~~~f~~~~~P~~i~~~~~~~~~~~~~~~ 171 (647)
+.. +. .++++|+++|+++++++|++||+||++..++..+........
T Consensus 375 ~~~~~~~~~s~~~~~~~~r~~r~~~~~~~~~~~~~~~~~~~~~k~~~~~~~vv~~F~vcw~P~~i~~~~~~~~~~~~~~~ 454 (520)
T 3v2y_A 375 DEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYASRSSENVALLKTVIIVLSVFIACWAPLFILLLLDVGCKVKTCDI 454 (520)
T ss_dssp HHHHHHHHHSHHHHHSHHHHHHHHHHHHHCSGGGTCSSTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTTCST
T ss_pred hhHhhhhhccchhhhcccchhhHHHHhhcchhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccH
Confidence 000 00 014889999999999999999999999999988765432221
Q ss_pred hhHHHHHHHHHHHHhhhhchhhHHHHHHhcHHHHHHHHHhhcccccccc
Q psy9472 172 NDFWHILRIVGFCLGFINSCINPIALYCVSGTFRKYFQKYLFCKMSSKI 220 (647)
Q Consensus 172 ~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~~~~~~ 220 (647)
. ....++.+++++||++||+||++++++||++++++++|+.....
T Consensus 455 ~----~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~~~~~~ 499 (520)
T 3v2y_A 455 L----FRAEYFLVLAVLNSGTNPIIYTLTNKEMRRAFIRIMGRPLEVLF 499 (520)
T ss_dssp T----TSCHHHHHHHHHGGGTHHHHHHHHCHHHHHHHHTTCCSCC----
T ss_pred H----HHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHhccccc
Confidence 1 22345677999999999999999999999999999987655443
No 32
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=99.91 E-value=2.3e-24 Score=227.02 Aligned_cols=198 Identities=19% Similarity=0.339 Sum_probs=144.4
Q ss_pred CccceehhhhccccccccCCCCcccchhhhhhhHHHHHHHHHhhhchHhhheeEeeccCCCCCccceeeecCCCCCCCCC
Q psy9472 1 LSADRFFAIVDPLRKLHSGIGGKRATRCTILIVAAIWIFAILCAIPSMTLSYVRAFKDDTNNNTLFESCYPFPPIDGYPN 80 (647)
Q Consensus 1 isidRy~aI~~P~~~~~~~y~~~~~~~~~~~~i~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~ 80 (647)
||+|||+||++|++ |..+++++++..+++++|++++++++|.+++........... ...|..++..
T Consensus 102 is~dRy~aI~~P~~-----~~~~~~~~~~~~~i~~~W~~~~~~~~p~~~~~~~~~~~~~~~----~~~C~~~~~~----- 167 (452)
T 3rze_A 102 LCIDRYRSVQQPLR-----YLKYRTKTRASATILGAWFLSFLWVIPILGWNHFMQQTSVRR----EDKCETDFYD----- 167 (452)
T ss_dssp HHHHHHHHHHCSCC-----TTTTSSHHHHHHHHHHHHHHHGGGHHHHHCCCC-------CC----SSSSCCSCTT-----
T ss_pred HHHHHHHheeCccc-----cccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCC----CCeecCCCcc-----
Confidence 58999999999999 777899999999999999999999998664433222111111 1126543322
Q ss_pred CcchhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCc-------------------------------------
Q psy9472 81 YPRTVIIMRFLIYYAVPLLIIACFYSLMARSLILSTKNMPGEL------------------------------------- 123 (647)
Q Consensus 81 ~~~~~~~~~~~~~~~~p~~ii~~~y~~i~~~~~~~~~~~~~~~------------------------------------- 123 (647)
...|.+...++.+++|+++++++|.+|++.++++.++.....
T Consensus 168 -~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (452)
T 3rze_A 168 -VTWFKVMTAIINFYLPTLLMLWFYAKIYKAVRQHCNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSE 246 (452)
T ss_dssp -CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHCEEEEEEECTTSCEEEEETEECSSCSSHHHHHHH
T ss_pred -cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHhhhhhhhhhhhcccCCcccccccccccccCCCCCccccc
Confidence 245677778888999999999999999999987644310000
Q ss_pred -------------c------------------------------------------------------------------
Q psy9472 124 -------------Q------------------------------------------------------------------ 124 (647)
Q Consensus 124 -------------~------------------------------------------------------------------ 124 (647)
.
T Consensus 247 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (452)
T 3rze_A 247 LDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKR 326 (452)
T ss_dssp HHHHHTSCCTTBCCHHHHHHHHHHHHHHHHHHHHTCTTTHHHHHHSCHHHHHHHHHHHHHHCHHHHTSCHHHHHHHHTTC
T ss_pred ccCCCCCCCCccccCCcccchhcCCCcccccCcccccccCCcccCCCccccccccccccccCCCCCCccccCcchhhhcC
Confidence 0
Q ss_pred ------------------hhH---------------HHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHhcCCCCCCh
Q psy9472 125 ------------------GQT---------------RQIRARKKVAKTVLTFVVVFAMCFFPQHFFFLWFYINPTAPDDY 171 (647)
Q Consensus 125 ------------------~~~---------------~~~~~~~k~~~~~~~i~~~f~~~~~P~~i~~~~~~~~~~~~~~~ 171 (647)
.+. ...++|+|+++++++++++|++||+||.+..++..+.......
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~vv~~f~icwlP~~i~~l~~~~~~~~~~~- 405 (452)
T 3rze_A 327 WDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYLHMNRERKAAKQLGFIMAAFILCWIPYFIFFMVIAFCKNCCNE- 405 (452)
T ss_dssp HHHHHHHHTTSHHHHHSHHHHHHHHHHHHHSSSGGGCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSCT-
T ss_pred CccccccccCCccCCCCCcccchhhhhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcccccH-
Confidence 000 0123788999999999999999999999999998876543322
Q ss_pred hhHHHHHHHHHHHHhhhhchhhHHHHHHhcHHHHHHHHHhhccccccc
Q psy9472 172 NDFWHILRIVGFCLGFINSCINPIALYCVSGTFRKYFQKYLFCKMSSK 219 (647)
Q Consensus 172 ~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~~~~~ 219 (647)
.+..++.+++++|+++||+||++++++||++++++++|+++.+
T Consensus 406 -----~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~~~~~~~ 448 (452)
T 3rze_A 406 -----HLHMFTIWLGYINSTLNPLIYPLCNENFKKTFKRILHIRSGEN 448 (452)
T ss_dssp -----TTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHTC-----
T ss_pred -----HHHHHHHHHHHHHhcccchhhhhccHHHHHHHHHHHHhccccc
Confidence 2345788899999999999999999999999999998876543
No 33
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=99.91 E-value=2.9e-24 Score=225.68 Aligned_cols=195 Identities=19% Similarity=0.226 Sum_probs=148.8
Q ss_pred CccceehhhhccccccccCCCCcccchhhhhhhHHHHHHHHHhhhchHhhheeEeeccCCCCCccceeeecCCCCCCCCC
Q psy9472 1 LSADRFFAIVDPLRKLHSGIGGKRATRCTILIVAAIWIFAILCAIPSMTLSYVRAFKDDTNNNTLFESCYPFPPIDGYPN 80 (647)
Q Consensus 1 isidRy~aI~~P~~~~~~~y~~~~~~~~~~~~i~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~ 80 (647)
||+|||+||++|++ |+.+.+++++..+++++|++++++++|+++.+......... ..|..++...+ .
T Consensus 129 isidRy~aI~~P~~-----~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~------~~c~~~~~~~~--~ 195 (448)
T 2z73_A 129 ISIDRYNVIGRPMA-----ASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLEGVL------CNCSFDYISRD--S 195 (448)
T ss_dssp HHHHHHHHTTSCTT-----TCCCCCHHHHHHHHHHHHHHHHHHHSGGGGTSSCEEECTTS------SSEEECCSCCS--H
T ss_pred HHHHHHHhcccccc-----ccceechhHHHHHHHHHHHHHHHHHHHHHhceeeeeecCCc------eeEecccccCC--c
Confidence 58999999999999 77789999999999999999999999887765443332211 12765543322 1
Q ss_pred CcchhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhccCCC--------CCCcchhHHHHHHHhHhHHHHHHHHHHHHHhhh
Q psy9472 81 YPRTVIIMRFLIYYAVPLLIIACFYSLMARSLILSTKNM--------PGELQGQTRQIRARKKVAKTVLTFVVVFAMCFF 152 (647)
Q Consensus 81 ~~~~~~~~~~~~~~~~p~~ii~~~y~~i~~~~~~~~~~~--------~~~~~~~~~~~~~~~k~~~~~~~i~~~f~~~~~ 152 (647)
....+.....++.+++|+++++++|.+|.+.++++.++. .++.+...+..++|+|++|++++++++|++||+
T Consensus 196 ~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~iv~~F~i~~~ 275 (448)
T 2z73_A 196 TTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWS 275 (448)
T ss_dssp HHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTTTCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhccccHHHHHHHHHHHHHHHHHHHhH
Confidence 234566667778899999999999999999888754321 111122223445788999999999999999999
Q ss_pred hHHHHHHHHHhcCCCCCChhhHHHHHHHHHHHHhhhhchhhHHHHHHhcHHHHHHHHHhhc
Q psy9472 153 PQHFFFLWFYINPTAPDDYNDFWHILRIVGFCLGFINSCINPIALYCVSGTFRKYFQKYLF 213 (647)
Q Consensus 153 P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~ 213 (647)
|+.+..++..+...... ...+..+..+++++|+++||+||++++++||++++++++
T Consensus 276 P~~i~~~~~~~~~~~~~-----~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~~~ 331 (448)
T 2z73_A 276 PYAVVALLAQFGPLEWV-----TPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFP 331 (448)
T ss_dssp HHHHHHHHHHHSCGGGC-----CHHHHHHHHHHHHHGGGSHHHHHHHHCHHHHHHHHHHCG
T ss_pred HHHHHHHHHHhCCcccC-----ChHHHHHHHHHHHHHHhhcchHHHHhhHHHHHHHHHHHH
Confidence 99999998877532111 134556778899999999999999999999999999884
No 34
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=99.91 E-value=1.1e-24 Score=230.30 Aligned_cols=199 Identities=21% Similarity=0.400 Sum_probs=149.7
Q ss_pred CccceehhhhccccccccCCCCcccchhhhhhhHHHHHHHHHhhhchHhhheeEeeccCCCCCccceeeecCCCCCCCCC
Q psy9472 1 LSADRFFAIVDPLRKLHSGIGGKRATRCTILIVAAIWIFAILCAIPSMTLSYVRAFKDDTNNNTLFESCYPFPPIDGYPN 80 (647)
Q Consensus 1 isidRy~aI~~P~~~~~~~y~~~~~~~~~~~~i~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~ 80 (647)
||+|||+||++|++ |+.+.+++++..+++++|++++++++|+++.......... ..|...+..... .
T Consensus 110 is~dRy~aI~~P~~-----~~~~~~~~~~~~~~~~~W~~~~~~~~p~~~~~~~~~~~~~-------~~c~~~~~~~~~-~ 176 (464)
T 4dkl_A 110 MSVDRYIAVCHPVK-----ALDFRTPRNAKIVNVCNWILSSAIGLPVMFMATTKYRQGS-------IDCTLTFSHPTW-Y 176 (464)
T ss_dssp HHHHHHHHHHCHHH-----HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSBCCEEETTE-------EECCBCCSSSHH-H
T ss_pred HHHHHHHHhhcccc-----ccccccccHhHHhHHHHHHHHHHHHHHHHHheeecccCCC-------ceEEeecCCcch-H
Confidence 58999999999999 6668899999999999999999999998876554433221 236655433221 1
Q ss_pred CcchhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCc-------------------------------------
Q psy9472 81 YPRTVIIMRFLIYYAVPLLIIACFYSLMARSLILSTKNMPGEL------------------------------------- 123 (647)
Q Consensus 81 ~~~~~~~~~~~~~~~~p~~ii~~~y~~i~~~~~~~~~~~~~~~------------------------------------- 123 (647)
+...|.+...++.+++|+++++++|.+|++.++++.+......
T Consensus 177 ~~~~~~~~~~~~~~~~p~~ii~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (464)
T 4dkl_A 177 WENLLKICVFIFAFIMPVLIITVCYGLMILRLKSVRNIFEMLRIDEGLRLKIYKNTEGYYTIGIGHLLTKSPSLNAAKSE 256 (464)
T ss_dssp HHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHCCCCCSHHHHHHHHHCCEEEEEECTTSCEEEETTEEEESSSCSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhccccccccccccCCCCCccccccccccCCCcccccccc
Confidence 2345667778888999999999999999999987655110000
Q ss_pred -------------c------------------------------------------------------------------
Q psy9472 124 -------------Q------------------------------------------------------------------ 124 (647)
Q Consensus 124 -------------~------------------------------------------------------------------ 124 (647)
.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (464)
T 4dkl_A 257 LDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKR 336 (464)
T ss_dssp HHHHHSSCCTTBCCHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHTSCHHHHHHHHHHHHHHCHHHHHTCHHHHHHHHTTC
T ss_pred ccccccccccceecCCccccccccCCcccccccccCCCCCccccCcccccchhhhhccccCCCCCcccccccccchhhcc
Confidence 0
Q ss_pred ---------------------------------hhHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHhcCCCCCCh
Q psy9472 125 ---------------------------------GQTRQIRARKKVAKTVLTFVVVFAMCFFPQHFFFLWFYINPTAPDDY 171 (647)
Q Consensus 125 ---------------------------------~~~~~~~~~~k~~~~~~~i~~~f~~~~~P~~i~~~~~~~~~~~~~~~ 171 (647)
...+..++|+|++|++++++++|++||+|+.+..++..+......
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~k~l~~v~~~F~icw~P~~i~~l~~~~~~~~~~-- 414 (464)
T 4dkl_A 337 WDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYEKDRNLRRITRMVLVVVAVFIVCWTPIHIYVIIKALITIPET-- 414 (464)
T ss_dssp HHHHHHHHTTSHHHHHSHHHHHHHHHHHHHSSSTTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCC--
T ss_pred cchhhcccccccccccCccccceeeecccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCcc--
Confidence 000012567899999999999999999999999999887653322
Q ss_pred hhHHHHHHHHHHHHhhhhchhhHHHHHHhcHHHHHHHHHhhccc
Q psy9472 172 NDFWHILRIVGFCLGFINSCINPIALYCVSGTFRKYFQKYLFCK 215 (647)
Q Consensus 172 ~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~ 215 (647)
.....+..++.+++++||++||+||++++++||++++++++++
T Consensus 415 -~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~lc~~~ 457 (464)
T 4dkl_A 415 -TFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRCFREFCIPT 457 (464)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHC--
T ss_pred -ccchhHHHHHHHHHHhhhchhHHHHHHhhHHHHHHHHHHhccc
Confidence 2335566788889999999999999999999999999975543
No 35
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=99.90 E-value=2.6e-24 Score=228.55 Aligned_cols=194 Identities=22% Similarity=0.322 Sum_probs=145.3
Q ss_pred CccceehhhhccccccccCCCCcccchhhhhhhHHHHHHHHHhhhchHhhheeEeeccCCCCCccceeeecCCCCCCCCC
Q psy9472 1 LSADRFFAIVDPLRKLHSGIGGKRATRCTILIVAAIWIFAILCAIPSMTLSYVRAFKDDTNNNTLFESCYPFPPIDGYPN 80 (647)
Q Consensus 1 isidRy~aI~~P~~~~~~~y~~~~~~~~~~~~i~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~ 80 (647)
||+|||+||++|+++.. .....+++++..+++++|++++++++|+++..... ... ..|...
T Consensus 133 is~dRy~aI~~P~~~~~--~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~---~~~------~~C~~~-------- 193 (481)
T 3pbl_A 133 ISIDRYTAVVMPVHYQH--GTGQSSCRRVALMITAVWVLAFAVSCPLLFGFNTT---GDP------TVCSIS-------- 193 (481)
T ss_dssp HHHHHHHHHHSHHHHHH--TTSSSCHHHHHHHHHHHHHHHHHHHHHHHTTTCCC---SST------TCCSCC--------
T ss_pred HHHHHHHhccccccccc--ccccccHHHHHHHHHHHHHHHHHHHHHHHheeccc---CCC------Cccccc--------
Confidence 58999999999999321 15678999999999999999999999988754321 111 126432
Q ss_pred CcchhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCcc------------------------------------
Q psy9472 81 YPRTVIIMRFLIYYAVPLLIIACFYSLMARSLILSTKNMPGELQ------------------------------------ 124 (647)
Q Consensus 81 ~~~~~~~~~~~~~~~~p~~ii~~~y~~i~~~~~~~~~~~~~~~~------------------------------------ 124 (647)
...|.....++.+++|+++++++|.+|++.++++.++......
T Consensus 194 -~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (481)
T 3pbl_A 194 -NPDFVIYSSVVSFYLPFGVTVLVYARIYVVLKQRRRKNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAK 272 (481)
T ss_dssp -CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCSSCEECSSSCEEETTTEEEESSSCHHHHH
T ss_pred -CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccccchhccccccCcccceeecccccccCCcccccCC
Confidence 2446677788889999999999999999999887654210000
Q ss_pred --------------------------------------------------------------------------------
Q psy9472 125 -------------------------------------------------------------------------------- 124 (647)
Q Consensus 125 -------------------------------------------------------------------------------- 124 (647)
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (481)
T 3pbl_A 273 SELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQ 352 (481)
T ss_dssp HHHHHHHTSCCTTCCCHHHHHHHHHHHHHHHHHHHHHCTTTHHHHHTSCHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHT
T ss_pred CcccchhccCCCceeccCCchhcccCCcccccccccccCccCccccccccccchhccccccccCCCCCCCcccccchhcc
Confidence
Q ss_pred ------------------hhHHH-----------------HHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHhcCCCCC
Q psy9472 125 ------------------GQTRQ-----------------IRARKKVAKTVLTFVVVFAMCFFPQHFFFLWFYINPTAPD 169 (647)
Q Consensus 125 ------------------~~~~~-----------------~~~~~k~~~~~~~i~~~f~~~~~P~~i~~~~~~~~~~~~~ 169 (647)
...+. .++|+|+++|+++++++|++||+||.+..++..+......
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~~~~~ 432 (481)
T 3pbl_A 353 KRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGVPLREKKATQMVAIVLGAFIVCWLPFFLTHVLNTHCQTCHV 432 (481)
T ss_dssp TCHHHHHHHHHTSHHHHHSHHHHHHHHHHHHHSSSTTSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCC
T ss_pred ccccccchhhhccccccCCcccccccceeecccccccccccchhhhHHHHHHHHHHHHHHHhhHHHHHHHHHhccccccC
Confidence 00000 0258999999999999999999999999998877543222
Q ss_pred ChhhHHHHHHHHHHHHhhhhchhhHHHHHHhcHHHHHHHHHhhccccccc
Q psy9472 170 DYNDFWHILRIVGFCLGFINSCINPIALYCVSGTFRKYFQKYLFCKMSSK 219 (647)
Q Consensus 170 ~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~~~~~ 219 (647)
. ..+..++.+++++|+++||+||++++++||++++++++|+++.+
T Consensus 433 ~-----~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~c~~~~~ 477 (481)
T 3pbl_A 433 S-----PELYSATTWLGYVNSALNPVIYTTFNIEFRKAFLKILSCGRPLE 477 (481)
T ss_dssp C-----HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC-----
T ss_pred c-----HHHHHHHHHHHHHhhccchHHHHHcCHHHHHHHHHHHhccCcHH
Confidence 1 34667788999999999999999999999999999998876543
No 36
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=99.89 E-value=3e-24 Score=229.47 Aligned_cols=199 Identities=22% Similarity=0.342 Sum_probs=142.2
Q ss_pred CccceehhhhccccccccCCCCcccchhhhhhhHHHHHHHHHhhhchHhhheeEeeccCCCCCccceeeecCCCCCCCCC
Q psy9472 1 LSADRFFAIVDPLRKLHSGIGGKRATRCTILIVAAIWIFAILCAIPSMTLSYVRAFKDDTNNNTLFESCYPFPPIDGYPN 80 (647)
Q Consensus 1 isidRy~aI~~P~~~~~~~y~~~~~~~~~~~~i~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~ 80 (647)
||+|||+||++|++ |+.+.+++++..+++++|++++++++++++..+....... ...|....... ...
T Consensus 276 isidRy~aI~~Pl~-----~~~~~t~~~~~~~i~~~Wi~s~l~~~~p~~~~~~~~~~~~------~~~c~~~~~~~-~~~ 343 (514)
T 3sn6_R 276 IAVDRYFAITSPFK-----YQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQE------AINCYAEETCC-DFF 343 (514)
T ss_dssp HHHHHHHHHHSHHH-----HHHHCCHHHHHHHHHHHHHHHHHTTHHHHHTTTTC---CH------HHHHHHSSSCC-CCC
T ss_pred HHHHHHHHcCCccc-----cchhccchHHHHHHHHHHHHHHHHHhhhhhccceecccCc------ccceeeccccc-ccc
Confidence 58999999999999 6668999999999999999999998766644332211111 01143322111 122
Q ss_pred CcchhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhccCCCCCC---------------------cchhHHHHHHHhHhHHH
Q psy9472 81 YPRTVIIMRFLIYYAVPLLIIACFYSLMARSLILSTKNMPGE---------------------LQGQTRQIRARKKVAKT 139 (647)
Q Consensus 81 ~~~~~~~~~~~~~~~~p~~ii~~~y~~i~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~k~~~~ 139 (647)
....|.+...++.+++|+++++++|.+|++.++++.++..+. .+...+..++++|++++
T Consensus 344 ~~~~y~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 423 (514)
T 3sn6_R 344 TNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKIDKSEGRFHVQNLSQVEQDGRTGHGLRRSSKFCLKEHKALKT 423 (514)
T ss_dssp CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------------------------CHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhhhHHHHHHHHH
Confidence 346777888889999999999999999999987653321100 00111223477899999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHhcCCCCCChhhHHHHHHHHHHHHhhhhchhhHHHHHHhcHHHHHHHHHhhcccccc
Q psy9472 140 VLTFVVVFAMCFFPQHFFFLWFYINPTAPDDYNDFWHILRIVGFCLGFINSCINPIALYCVSGTFRKYFQKYLFCKMSS 218 (647)
Q Consensus 140 ~~~i~~~f~~~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~~~~ 218 (647)
+++++++|++||+|+.+..++..+...... ..+..++.+++++||++||+||+ ++++||++++++++|++++
T Consensus 424 l~~iv~~F~lcwlP~~i~~~~~~~~~~~~~------~~~~~~~~~l~~~ns~~NPiIY~-~~~~fR~~~~~~l~~~~~~ 495 (514)
T 3sn6_R 424 LGIIMGTFTLCWLPFFIVNIVHVIQDNLIR------KEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCLRRSS 495 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTTSSC------HHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHTTCC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccccc------hHHHHHHHHHHHHHHhhhHHhhc-CCHHHHHHHHHHhCcCccc
Confidence 999999999999999999998877543211 34556788899999999999999 9999999999999876544
No 37
>2koe_A Human cannabinoid receptor 1 - helix 7/8 peptide; GPCR, HCB1, membrane protein, signaling protein; NMR {Homo sapiens}
Probab=98.48 E-value=1.7e-08 Score=64.58 Aligned_cols=37 Identities=24% Similarity=0.269 Sum_probs=33.1
Q ss_pred HHHHHHHhhhhchhhHHHHHHhcHHHHHHHHHhhccc
Q psy9472 179 RIVGFCLGFINSCINPIALYCVSGTFRKYFQKYLFCK 215 (647)
Q Consensus 179 ~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~ 215 (647)
..++.+++++||++||+||++++++||+++++.++|+
T Consensus 3 ~~~~~~l~~~ns~lNPiIY~~~~~~fr~~~~~~~~~~ 39 (40)
T 2koe_A 3 FAFASMLCLLNSTVNPIIYALRSKDLRHAFRSMFPSA 39 (40)
T ss_dssp HHHHHHHHHHHHHSSTTTTBTTBHHHHHHHTTTCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHhhhc
Confidence 3567889999999999999999999999999988764
No 38
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A
Probab=98.15 E-value=3.8e-07 Score=54.84 Aligned_cols=30 Identities=33% Similarity=0.556 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHhhhheeeccccccccCCCcccccc
Q psy9472 389 VSVFTLTALSADRFFAIVDPLRKLHSGIGGKRATR 423 (647)
Q Consensus 389 ~s~~~l~~ia~dRy~~i~~P~~~~~~~~~~~~~~~ 423 (647)
+|++++++||+|||++|++|++ |....+++
T Consensus 2 ~Si~~L~~is~dRy~aI~~Pl~-----~~~~~t~~ 31 (32)
T 1hll_A 2 SSIVHLCAISLDRYWSITQAIE-----YNLKRTPR 31 (32)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHG-----GGSSCCCC
T ss_pred cHHHHHHHHHHHHHHHhhhhhh-----cccccCCC
Confidence 6899999999999999999999 66666654
No 39
>2ki9_A Cannabinoid receptor 2; GPCR, G-protein coupled receptor, membrane protein; NMR {Synthetic}
Probab=97.97 E-value=8.1e-07 Score=53.58 Aligned_cols=29 Identities=24% Similarity=0.440 Sum_probs=25.5
Q ss_pred HhHhHHHHHHHHHHHHHhhhhHHHHHHHH
Q psy9472 133 RKKVAKTVLTFVVVFAMCFFPQHFFFLWF 161 (647)
Q Consensus 133 ~~k~~~~~~~i~~~f~~~~~P~~i~~~~~ 161 (647)
|+|++|++++++++|++||+||++..++.
T Consensus 1 e~k~~k~l~~vv~~F~icW~P~~i~~~~~ 29 (33)
T 2ki9_A 1 DVRLAKTLGLVLAVLLICWFPVLALMAHS 29 (33)
T ss_dssp CCSSSSHHHHHHHHHTTTSSHHHHHHTTT
T ss_pred CchhhhhHHHHHHHHHHHHhHHHHHHHHH
Confidence 46889999999999999999999977654
No 40
>2ki9_A Cannabinoid receptor 2; GPCR, G-protein coupled receptor, membrane protein; NMR {Synthetic}
Probab=97.83 E-value=2.7e-06 Score=51.21 Aligned_cols=30 Identities=23% Similarity=0.425 Sum_probs=26.0
Q ss_pred hhhhhHHHHHHHHHHhhccccHHHHHHHHH
Q psy9472 529 RKKVAKTVLTFVVVFAMCFFPQHFFFLWFY 558 (647)
Q Consensus 529 ~~k~~~~~~~i~~~f~~~w~P~~i~~~~~~ 558 (647)
|+|++|++.+++++|++||+||++..++..
T Consensus 1 e~k~~k~l~~vv~~F~icW~P~~i~~~~~~ 30 (33)
T 2ki9_A 1 DVRLAKTLGLVLAVLLICWFPVLALMAHSL 30 (33)
T ss_dssp CCSSSSHHHHHHHHHTTTSSHHHHHHTTTT
T ss_pred CchhhhhHHHHHHHHHHHHhHHHHHHHHHH
Confidence 357899999999999999999999877644
No 41
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A
Probab=97.29 E-value=1.7e-05 Score=47.44 Aligned_cols=22 Identities=32% Similarity=0.607 Sum_probs=17.9
Q ss_pred CccceehhhhccccccccCCCCcccch
Q psy9472 1 LSADRFFAIVDPLRKLHSGIGGKRATR 27 (647)
Q Consensus 1 isidRy~aI~~P~~~~~~~y~~~~~~~ 27 (647)
||+|||+||++|++ |...++++
T Consensus 10 is~dRy~aI~~Pl~-----~~~~~t~~ 31 (32)
T 1hll_A 10 ISLDRYWSITQAIE-----YNLKRTPR 31 (32)
T ss_dssp HHTHHHHHHHHHHG-----GGSSCCCC
T ss_pred HHHHHHHHhhhhhh-----cccccCCC
Confidence 58999999999999 55566654
No 42
>2koe_A Human cannabinoid receptor 1 - helix 7/8 peptide; GPCR, HCB1, membrane protein, signaling protein; NMR {Homo sapiens}
Probab=96.85 E-value=0.00019 Score=45.41 Aligned_cols=33 Identities=12% Similarity=0.065 Sum_probs=25.6
Q ss_pred HHHHHhhhhhccC-chhHHhhcCCccccccccccCC
Q psy9472 573 ILRIMSSKIINSR-NANARRFHRPSTYSSTRKWDSV 607 (647)
Q Consensus 573 ~~~~~~~~~~ns~-NPiI~~fr~~~~~~~~~~~~~~ 607 (647)
+..++++ +|++ ||+||.++++.+|...++..++
T Consensus 5 ~~~~l~~--~ns~lNPiIY~~~~~~fr~~~~~~~~~ 38 (40)
T 2koe_A 5 FASMLCL--LNSTVNPIIYALRSKDLRHAFRSMFPS 38 (40)
T ss_dssp HHHHHHH--HHHHSSTTTTBTTBHHHHHHHTTTCCC
T ss_pred HHHHHHH--HHHHHHHHHHHHccHHHHHHHHHHhhh
Confidence 4445555 9999 9999999998888877776544
No 43
>2lot_A Apelin receptor; membrane protein; NMR {Homo sapiens} PDB: 2lou_A 2lov_A 2low_A
Probab=96.29 E-value=0.00067 Score=46.95 Aligned_cols=31 Identities=26% Similarity=0.702 Sum_probs=27.7
Q ss_pred hHHHHHHHHHHHHHHhhHHhhhhhhhcCCCC
Q psy9472 305 LVPIVFAFIFVVGVLGNGTLVLIFINHKSMR 335 (647)
Q Consensus 305 ~~~~~~~~~~~~g~~~N~~vl~~i~~~~~l~ 335 (647)
+..++|++++++|++||+++++++.++|..+
T Consensus 30 ~lp~~Y~lvFvlGl~GN~lvl~v~~~~~~~~ 60 (64)
T 2lot_A 30 LIPAIYMLVFLLGTTGNGLVLWTVFRKKGHH 60 (64)
T ss_dssp SSHHHHHHTTTTTTTSSSSHHHHHHHHSSSC
T ss_pred HHHHHHHHHHHHHHhhhhhheeeeeEecccc
Confidence 7889999999999999999999998887543
No 44
>2rdd_B UPF0092 membrane protein YAJC; drug resistance, multidrug efflux, transporter, antiporter, novel transmembrane helix, ACRB, inner membrane; HET: AIC; 3.50A {Escherichia coli}
Probab=26.07 E-value=23 Score=21.14 Aligned_cols=20 Identities=20% Similarity=0.364 Sum_probs=11.9
Q ss_pred hhHHHHH-HHHHHHHHHHHHh
Q psy9472 95 AVPLLII-ACFYSLMARSLIL 114 (647)
Q Consensus 95 ~~p~~ii-~~~y~~i~~~~~~ 114 (647)
++|++++ ++.|..+.|-.+|
T Consensus 6 ~l~~v~~~~ifYFl~iRPQ~K 26 (37)
T 2rdd_B 6 ILMLVVFGLIFYFMILRPQQK 26 (37)
T ss_dssp HHHHHHHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhHHH
Confidence 3455544 5667777776653
No 45
>2ket_A Cathelicidin-6; antimicrobial peptide, antibiotic, antimicrobial, fungicide, pyrrolidone carboxylic acid, secreted; NMR {Bos taurus}
Probab=24.36 E-value=40 Score=17.43 Aligned_cols=12 Identities=42% Similarity=0.609 Sum_probs=9.2
Q ss_pred HHHHHHHHHhhc
Q psy9472 202 GTFRKYFQKYLF 213 (647)
Q Consensus 202 ~~fr~~~~~~~~ 213 (647)
+.||+.+++++.
T Consensus 4 krfrkkfkklfk 15 (27)
T 2ket_A 4 KRFRKKFKKLFK 15 (27)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 678888888775
Done!