Query psy948
Match_columns 1576
No_of_seqs 655 out of 3906
Neff 7.7
Searched_HMMs 29240
Date Fri Aug 16 20:29:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy948.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/948hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3m0c_C LDL receptor, low-densi 100.0 5.9E-87 2E-91 874.6 32.7 625 546-1399 21-712 (791)
2 1n7d_A LDL receptor, low-densi 100.0 1.8E-83 6.2E-88 840.1 47.4 624 547-1399 4-694 (699)
3 3m0c_C LDL receptor, low-densi 100.0 8.2E-81 2.8E-85 816.5 28.6 523 710-1576 26-560 (791)
4 1n7d_A LDL receptor, low-densi 100.0 2E-77 6.8E-82 783.0 37.8 528 710-1576 8-542 (699)
5 4a0p_A LRP6, LRP-6, low-densit 100.0 1.9E-57 6.4E-62 585.7 46.9 385 1162-1576 89-479 (628)
6 3s94_A LRP-6, low-density lipo 100.0 3.4E-56 1.2E-60 573.6 42.6 381 1164-1576 95-481 (619)
7 3p5b_L Low density lipoprotein 100.0 1.4E-37 4.9E-42 381.4 31.5 304 1076-1397 39-398 (400)
8 3v64_C Agrin; beta propeller, 100.0 3E-37 1E-41 371.8 27.2 301 1077-1397 1-343 (349)
9 3v65_B Low-density lipoprotein 100.0 1.7E-36 5.7E-41 370.4 27.7 302 1075-1396 42-385 (386)
10 4a0p_A LRP6, LRP-6, low-densit 100.0 9.1E-37 3.1E-41 393.2 26.6 303 1077-1396 265-619 (628)
11 3s94_A LRP-6, low-density lipo 100.0 2E-36 6.9E-41 389.7 28.8 301 1077-1397 272-618 (619)
12 3p5b_L Low density lipoprotein 100.0 6.8E-34 2.3E-38 348.7 24.5 240 1321-1576 9-248 (400)
13 3v65_B Low-density lipoprotein 100.0 2.2E-32 7.6E-37 333.9 22.3 237 1321-1576 12-248 (386)
14 3sov_A LRP-6, low-density lipo 100.0 1.4E-29 4.8E-34 300.5 25.7 218 1164-1398 90-310 (318)
15 3v64_C Agrin; beta propeller, 100.0 5.7E-30 1.9E-34 308.4 22.3 205 1356-1576 1-205 (349)
16 1ijq_A LDL receptor, low-densi 100.0 5E-28 1.7E-32 287.4 26.1 217 1164-1396 88-315 (316)
17 3sov_A LRP-6, low-density lipo 99.9 8.3E-22 2.8E-26 233.7 30.1 236 1174-1576 12-252 (318)
18 1ijq_A LDL receptor, low-densi 99.9 6.8E-21 2.3E-25 226.0 33.3 235 1175-1576 10-252 (316)
19 2fyj_A Low-density lipoprotein 99.8 2.3E-19 7.8E-24 166.1 8.5 77 547-623 3-81 (82)
20 1npe_A Nidogen, entactin; glyc 99.8 6.7E-17 2.3E-21 186.4 29.7 228 1175-1569 10-246 (267)
21 2fcw_B LDL receptor, low-densi 99.8 2.8E-19 9.5E-24 164.2 5.1 76 548-623 2-79 (80)
22 2fyj_A Low-density lipoprotein 99.7 1E-17 3.5E-22 155.0 8.5 77 298-376 4-81 (82)
23 2fcw_B LDL receptor, low-densi 99.7 4.3E-18 1.5E-22 156.3 3.1 76 340-416 2-78 (80)
24 3s25_A Hypothetical 7-bladed b 99.6 2.2E-14 7.6E-19 168.1 28.4 250 1174-1570 36-301 (302)
25 1npe_A Nidogen, entactin; glyc 99.6 6E-15 2E-19 169.9 18.9 160 1403-1576 3-169 (267)
26 3tc9_A Hypothetical hydrolase; 99.6 2.2E-13 7.4E-18 168.3 27.0 252 1192-1561 134-429 (430)
27 3s25_A Hypothetical 7-bladed b 99.6 1.9E-13 6.6E-18 160.1 24.2 227 1204-1572 23-265 (302)
28 4hw6_A Hypothetical protein, I 99.5 1E-12 3.5E-17 162.3 25.8 252 1193-1561 137-432 (433)
29 3hrp_A Uncharacterized protein 99.4 6.1E-11 2.1E-15 145.5 28.2 250 1239-1561 129-409 (409)
30 3kya_A Putative phosphatase; s 99.4 7.3E-11 2.5E-15 145.7 27.3 270 1192-1564 136-477 (496)
31 3fvz_A Peptidyl-glycine alpha- 99.3 9.8E-11 3.4E-15 139.1 24.3 259 1192-1564 21-324 (329)
32 2xrc_A Human complement factor 99.2 3.5E-12 1.2E-16 162.1 5.6 105 508-624 173-277 (565)
33 3hrp_A Uncharacterized protein 99.2 3.1E-09 1.1E-13 130.3 30.4 146 1165-1312 142-296 (409)
34 3tc9_A Hypothetical hydrolase; 99.2 1.8E-09 6.1E-14 133.2 27.9 144 1165-1312 150-299 (430)
35 4hw6_A Hypothetical protein, I 99.2 1.5E-09 5.2E-14 133.9 26.5 143 1165-1312 153-302 (433)
36 2gtl_O Extracellular hemoglobi 99.2 2.1E-13 7.3E-18 146.6 -7.0 128 525-701 37-170 (215)
37 1rwi_B Serine/threonine-protei 99.2 1.8E-09 6.2E-14 123.2 24.7 245 1191-1564 17-266 (270)
38 2gtl_O Extracellular hemoglobi 99.2 7.9E-13 2.7E-17 142.2 -4.3 129 487-641 39-185 (215)
39 2qc5_A Streptogramin B lactona 99.2 1.1E-08 3.9E-13 118.0 29.9 279 1192-1560 17-298 (300)
40 2xrc_A Human complement factor 99.1 6E-11 2E-15 150.7 6.2 95 680-787 183-277 (565)
41 1dx5_I Thrombomodulin; serine 99.0 1.4E-10 4.9E-15 116.0 4.4 59 1325-1389 54-112 (118)
42 2fp8_A Strictosidine synthase; 99.0 5.3E-08 1.8E-12 115.0 27.0 276 1192-1569 16-320 (322)
43 1q7f_A NHL, brain tumor CG1071 99.0 8.6E-08 2.9E-12 110.5 27.9 244 1192-1560 27-278 (286)
44 3kya_A Putative phosphatase; s 99.0 3.1E-08 1E-12 122.4 25.2 145 1165-1312 152-339 (496)
45 2z2n_A Virginiamycin B lyase; 99.0 3.6E-07 1.2E-11 105.2 31.5 281 1192-1562 12-295 (299)
46 2ism_A Putative oxidoreductase 98.9 7.5E-08 2.6E-12 115.5 25.7 271 1187-1552 23-336 (352)
47 3a9g_A Putative uncharacterize 98.9 1.1E-07 3.8E-12 114.0 26.9 277 1188-1562 22-352 (354)
48 2p4o_A Hypothetical protein; p 98.9 1.7E-07 5.9E-12 109.9 27.9 240 1195-1550 32-278 (306)
49 1ajj_A LR5, low-density lipopr 98.9 4.9E-10 1.7E-14 86.8 3.2 37 750-786 1-37 (37)
50 2kny_A LRP-1, linker, APO-E; l 98.9 2.8E-10 9.4E-15 104.2 2.0 64 546-609 6-76 (80)
51 1ajj_A LR5, low-density lipopr 98.9 5.6E-10 1.9E-14 86.5 3.3 36 549-584 2-37 (37)
52 2qc5_A Streptogramin B lactona 98.9 4E-07 1.4E-11 104.9 28.6 243 1239-1565 18-263 (300)
53 1d2l_A Lipoprotein receptor re 98.9 9.3E-10 3.2E-14 88.8 4.2 39 546-584 3-41 (45)
54 1d2l_A Lipoprotein receptor re 98.9 9.3E-10 3.2E-14 88.8 3.5 38 748-785 3-40 (45)
55 3a7q_B Low-density lipoprotein 98.9 1.1E-09 3.8E-14 88.3 4.0 39 546-584 5-43 (44)
56 1uzk_A Fibrillin-1; glycoprote 98.9 9E-10 3.1E-14 116.8 4.4 60 1334-1395 99-161 (162)
57 3a7q_B Low-density lipoprotein 98.9 9.6E-10 3.3E-14 88.6 3.2 39 748-786 5-43 (44)
58 2kny_A LRP-1, linker, APO-E; l 98.9 5.8E-10 2E-14 102.1 2.2 66 335-400 3-75 (80)
59 1cr8_A Protein (LOW density li 98.8 1.7E-09 5.8E-14 86.3 4.4 38 547-584 2-40 (42)
60 2jm4_A Relaxin receptor 1; LDL 98.8 1.9E-09 6.4E-14 86.5 4.7 39 546-584 4-43 (43)
61 2m0p_A Low-density lipoprotein 98.8 6.4E-10 2.2E-14 91.8 1.7 40 748-787 4-43 (52)
62 1cr8_A Protein (LOW density li 98.8 1.7E-09 5.6E-14 86.3 4.0 38 749-786 2-40 (42)
63 2m0p_A Low-density lipoprotein 98.8 7.6E-10 2.6E-14 91.4 1.9 40 546-585 4-43 (52)
64 2jm4_A Relaxin receptor 1; LDL 98.8 2E-09 6.8E-14 86.3 4.1 39 748-786 4-43 (43)
65 2w86_A Fibrillin-1, fibrillin1 98.8 2.3E-09 7.8E-14 111.8 5.7 58 1335-1395 88-146 (147)
66 1rwi_B Serine/threonine-protei 98.8 1.3E-07 4.5E-12 107.7 21.0 227 1167-1520 37-266 (270)
67 3vgz_A Uncharacterized protein 98.8 4.2E-06 1.5E-10 98.7 34.6 273 1195-1550 41-334 (353)
68 3dpr_E LDL-receptor class A 3; 98.8 2.3E-09 7.7E-14 84.1 3.5 36 751-786 1-38 (39)
69 1k7b_A Subgroup A ROUS sarcoma 98.8 2.3E-09 7.7E-14 87.9 3.4 39 748-786 4-47 (47)
70 1k7b_A Subgroup A ROUS sarcoma 98.8 2.1E-09 7E-14 88.1 3.2 39 546-584 4-47 (47)
71 3dpr_E LDL-receptor class A 3; 98.8 2.4E-09 8.3E-14 83.9 2.9 36 549-584 1-38 (39)
72 1q7f_A NHL, brain tumor CG1071 98.7 1.2E-06 4.2E-11 100.7 25.7 141 1166-1309 42-189 (286)
73 2qe8_A Uncharacterized protein 98.7 3.5E-07 1.2E-11 109.1 21.5 110 1432-1550 197-310 (343)
74 3dr2_A Exported gluconolactona 98.7 2.8E-06 9.7E-11 99.2 28.7 264 1183-1560 33-304 (305)
75 2knx_A Prolow-density lipoprot 98.7 6.8E-09 2.3E-13 85.8 4.3 39 546-584 4-43 (50)
76 3fvz_A Peptidyl-glycine alpha- 98.7 4.3E-07 1.5E-11 107.5 21.0 135 1166-1300 103-256 (329)
77 1j8e_A Low-density lipoprotein 98.7 4.9E-09 1.7E-13 84.5 2.6 37 749-785 3-39 (44)
78 2knx_A Prolow-density lipoprot 98.7 6.2E-09 2.1E-13 86.0 3.2 39 748-786 4-43 (50)
79 3dsm_A Uncharacterized protein 98.7 1.2E-06 4E-11 103.8 24.3 246 1242-1568 45-308 (328)
80 2z2n_A Virginiamycin B lyase; 98.7 3.2E-06 1.1E-10 97.2 27.1 242 1238-1563 12-256 (299)
81 1j8e_A Low-density lipoprotein 98.7 5.3E-09 1.8E-13 84.3 2.5 37 547-583 3-39 (44)
82 2i1p_A Low-density lipoprotein 98.7 4.8E-09 1.6E-13 86.2 2.0 39 749-787 5-44 (48)
83 3dsm_A Uncharacterized protein 98.7 8.5E-06 2.9E-10 96.4 30.2 266 1195-1539 44-321 (328)
84 1jrf_A TVA LDL-A module, subgr 98.7 7.9E-09 2.7E-13 84.7 2.6 38 749-786 3-45 (47)
85 2i1p_A Low-density lipoprotein 98.6 7.6E-09 2.6E-13 85.0 2.2 37 548-584 6-43 (48)
86 2fp8_A Strictosidine synthase; 98.6 1.8E-06 6.2E-11 101.7 23.2 84 1479-1571 183-278 (322)
87 1jrf_A TVA LDL-A module, subgr 98.6 7.9E-09 2.7E-13 84.7 0.6 38 547-584 3-45 (47)
88 2p4o_A Hypothetical protein; p 98.6 2.9E-06 1E-10 99.3 22.4 75 1479-1565 167-245 (306)
89 3hfq_A Uncharacterized protein 98.5 3.1E-05 1.1E-09 91.6 30.9 123 1431-1561 188-316 (347)
90 1ri6_A Putative isomerase YBHE 98.5 5.2E-05 1.8E-09 88.7 32.2 124 1431-1561 179-307 (343)
91 1lmj_A Fibrillin 1; EGF, calci 98.5 2.8E-08 9.7E-13 93.3 2.3 68 1325-1395 17-85 (86)
92 3g4e_A Regucalcin; six bladed 98.5 3.6E-05 1.2E-09 89.4 28.3 248 1190-1550 8-262 (297)
93 3e5z_A Putative gluconolactona 98.4 6.6E-05 2.3E-09 86.7 29.6 259 1238-1563 25-287 (296)
94 2g8s_A Glucose/sorbosone dehyd 98.4 9.3E-06 3.2E-10 97.2 22.9 125 1427-1559 194-351 (353)
95 3scy_A Hypothetical bacterial 98.4 7.4E-05 2.5E-09 88.9 30.8 306 1196-1561 3-336 (361)
96 2vj3_A Neurogenic locus notch 98.4 3.7E-07 1.3E-11 93.5 8.8 55 1325-1388 58-115 (135)
97 1z1y_A Ookinete surface protei 98.4 1E-07 3.5E-12 103.4 4.4 58 1328-1390 111-173 (186)
98 3g4e_A Regucalcin; six bladed 98.4 1.9E-05 6.4E-10 91.8 23.9 120 1431-1569 99-237 (297)
99 2gtl_N Extracellular hemoglobi 98.4 1.5E-07 5.1E-12 100.2 4.9 56 547-602 51-113 (220)
100 2dg1_A DRP35, lactonase; beta 98.4 7.8E-05 2.7E-09 87.5 28.1 256 1238-1564 42-318 (333)
101 2w2n_E LDL receptor, low-densi 98.3 1E-07 3.5E-12 93.2 1.9 68 1322-1395 39-106 (107)
102 2qe8_A Uncharacterized protein 98.3 1.9E-05 6.3E-10 94.0 21.7 86 1482-1576 196-293 (343)
103 1pjx_A Dfpase, DIISOPROPYLFLUO 98.3 7.3E-05 2.5E-09 86.7 26.2 122 1430-1563 172-300 (314)
104 3das_A Putative oxidoreductase 98.3 0.00011 3.8E-09 86.9 27.2 257 1188-1549 25-326 (347)
105 1yo8_A Thrombospondin-2; EGF, 98.3 9.4E-07 3.2E-11 111.2 9.3 61 1325-1387 62-139 (634)
106 3qqz_A Putative uncharacterize 98.3 0.00013 4.4E-09 82.7 25.4 121 1431-1563 122-254 (255)
107 1kli_L Factor VIIA; extrinsic 98.2 4.5E-07 1.5E-11 80.6 3.5 46 1354-1400 3-49 (69)
108 3u4y_A Uncharacterized protein 98.2 0.0005 1.7E-08 80.2 30.8 282 1167-1520 12-306 (331)
109 2gtl_M Hemoglobin linker chain 98.2 4.7E-07 1.6E-11 97.5 3.5 64 546-620 51-119 (217)
110 1l0q_A Surface layer protein; 98.2 0.0017 5.7E-08 77.7 34.7 270 1167-1562 4-275 (391)
111 2gtl_N Extracellular hemoglobi 98.1 5.6E-07 1.9E-11 95.8 2.4 60 378-437 52-114 (220)
112 1kli_L Factor VIIA; extrinsic 98.1 5.7E-07 2E-11 80.0 2.1 42 1076-1118 4-46 (69)
113 1emn_A Fibrillin; extracellula 98.1 1E-06 3.5E-11 81.8 3.8 61 1324-1390 17-78 (82)
114 1ri6_A Putative isomerase YBHE 98.1 0.0009 3.1E-08 78.0 29.9 104 1167-1272 52-160 (343)
115 1z6c_A Vitamin K-dependent pro 98.1 8.5E-07 2.9E-11 83.3 3.0 68 1324-1397 16-85 (87)
116 3vgz_A Uncharacterized protein 98.1 0.00059 2E-08 80.1 27.9 252 1241-1562 41-303 (353)
117 2jkh_L Factor X light chain; p 98.1 1.4E-06 4.7E-11 74.1 3.2 44 1356-1400 1-44 (55)
118 1aut_L Activated protein C; se 98.0 3.2E-06 1.1E-10 83.8 5.4 67 1324-1398 26-95 (114)
119 1x7a_L Coagulation factor IX, 98.0 2E-06 6.8E-11 89.1 4.1 68 1324-1399 60-128 (146)
120 3dr2_A Exported gluconolactona 98.0 0.00035 1.2E-08 81.2 23.5 85 1480-1569 187-274 (305)
121 2gtl_M Hemoglobin linker chain 98.0 2E-06 6.7E-11 92.8 3.6 41 748-788 51-95 (217)
122 2jkh_L Factor X light chain; p 98.0 1.4E-06 4.9E-11 74.0 1.9 38 1078-1116 2-39 (55)
123 1apq_A Complement protease C1R 98.0 3.7E-06 1.3E-10 70.9 3.5 40 1076-1115 3-49 (53)
124 3u4y_A Uncharacterized protein 97.9 0.0014 4.9E-08 76.2 26.8 236 1249-1562 6-252 (331)
125 2bou_A EGF-like module contain 97.9 4.5E-06 1.5E-10 86.3 3.8 71 1324-1397 59-138 (143)
126 1kig_L Factor XA; glycoprotein 97.9 4.3E-06 1.5E-10 69.8 2.6 41 1359-1400 1-41 (51)
127 3bws_A Protein LP49; two-domai 97.9 0.0069 2.4E-07 73.3 32.3 297 1195-1562 123-432 (433)
128 2vh0_B Activated factor XA lig 97.9 4.8E-06 1.7E-10 84.9 3.2 67 1324-1398 54-122 (134)
129 1nfu_B Coagulation factor XA, 97.9 5E-06 1.7E-10 89.8 3.2 68 1324-1399 54-123 (195)
130 2iwa_A Glutamine cyclotransfer 97.9 0.0008 2.7E-08 76.6 21.5 77 1241-1318 21-99 (266)
131 2ghs_A AGR_C_1268P; regucalcin 97.9 0.0022 7.6E-08 75.4 26.4 107 1430-1550 179-292 (326)
132 3e5z_A Putative gluconolactona 97.8 9.3E-05 3.2E-09 85.5 13.7 122 1423-1563 21-163 (296)
133 2bz6_L Blood coagulation facto 97.8 7.3E-06 2.5E-10 69.0 2.9 41 1359-1400 2-43 (53)
134 3hfq_A Uncharacterized protein 97.8 0.0083 2.8E-07 70.4 30.5 104 1167-1271 53-170 (347)
135 2wph_E Coagulation factor IXA 97.8 1.1E-05 3.9E-10 69.3 3.6 40 1359-1399 2-42 (59)
136 1kig_L Factor XA; glycoprotein 97.8 7.7E-06 2.6E-10 68.2 1.9 34 1084-1117 4-37 (51)
137 1apq_A Complement protease C1R 97.7 1.9E-05 6.3E-10 66.6 4.1 42 1354-1396 2-51 (53)
138 3scy_A Hypothetical bacterial 97.7 0.011 3.7E-07 69.9 29.7 116 1193-1310 48-182 (361)
139 2c4f_L Coagulation factor VII 97.7 2.1E-05 7.1E-10 81.1 4.7 68 1325-1400 60-132 (142)
140 3a9g_A Putative uncharacterize 97.7 0.00025 8.7E-09 84.7 14.7 129 1427-1563 26-179 (354)
141 3ojy_B Complement component C8 97.7 2.9E-05 9.9E-10 97.2 6.3 46 344-394 69-115 (537)
142 1pjx_A Dfpase, DIISOPROPYLFLUO 97.7 0.0028 9.7E-08 73.1 22.8 135 1171-1312 42-205 (314)
143 1lmj_A Fibrillin 1; EGF, calci 97.7 2.6E-05 8.9E-10 73.0 4.1 40 1074-1114 43-83 (86)
144 1nir_A Nitrite reductase; hemo 97.6 0.047 1.6E-06 68.9 35.0 322 1167-1561 151-513 (543)
145 3ojy_B Complement component C8 97.6 4.3E-05 1.5E-09 95.6 6.3 46 552-602 69-115 (537)
146 2bz6_L Blood coagulation facto 97.6 1.9E-05 6.4E-10 66.4 1.8 37 1080-1117 2-39 (53)
147 1jof_A Carboxy-CIS,CIS-muconat 97.6 0.016 5.3E-07 69.0 27.7 129 1432-1563 195-342 (365)
148 3ojy_A Complement component C8 97.5 5E-05 1.7E-09 95.1 5.6 37 548-585 65-102 (554)
149 2ism_A Putative oxidoreductase 97.5 0.00039 1.3E-08 83.0 13.1 129 1425-1562 26-178 (352)
150 2dg1_A DRP35, lactonase; beta 97.5 0.0076 2.6E-07 70.3 23.8 143 1166-1312 57-211 (333)
151 3c75_H MADH, methylamine dehyd 97.5 0.066 2.3E-06 65.1 32.0 106 1167-1275 87-212 (426)
152 2wph_E Coagulation factor IXA 97.5 3.8E-05 1.3E-09 66.0 2.2 33 1084-1116 5-38 (59)
153 1pby_B Quinohemoprotein amine 97.5 0.071 2.4E-06 61.4 31.1 72 1481-1564 241-312 (337)
154 3h5c_B Vitamin K-dependent pro 97.3 0.00016 5.3E-09 85.2 6.2 66 1325-1398 18-85 (317)
155 3sjl_D Methylamine dehydrogena 97.3 0.14 4.7E-06 61.3 31.4 106 1167-1275 47-172 (386)
156 2g8s_A Glucose/sorbosone dehyd 97.3 0.002 6.7E-08 76.9 14.7 117 1430-1551 66-218 (353)
157 1cru_A Protein (soluble quinop 97.3 0.0027 9.3E-08 78.3 16.2 121 1429-1552 76-249 (454)
158 2mad_H Methylamine dehydrogena 97.2 0.28 9.7E-06 58.6 33.1 113 1195-1312 67-194 (373)
159 3sre_A PON1, serum paraoxonase 97.2 0.063 2.2E-06 63.6 26.5 109 1192-1301 46-182 (355)
160 3nol_A Glutamine cyclotransfer 97.2 0.032 1.1E-06 62.8 22.5 71 1244-1318 46-120 (262)
161 3bws_A Protein LP49; two-domai 97.2 0.22 7.6E-06 59.8 32.2 118 1429-1562 253-390 (433)
162 1l0q_A Surface layer protein; 97.2 0.05 1.7E-06 64.6 25.9 119 1429-1563 115-234 (391)
163 2p9w_A MAL S 1 allergenic prot 97.2 0.018 6.3E-07 66.9 20.7 250 1238-1549 10-303 (334)
164 1z6c_A Vitamin K-dependent pro 97.1 0.00025 8.4E-09 66.4 4.0 37 1075-1114 43-81 (87)
165 3das_A Putative oxidoreductase 97.1 0.0032 1.1E-07 74.5 14.4 132 1424-1563 26-184 (347)
166 1dx5_I Thrombomodulin; serine 97.1 0.00017 5.7E-09 71.8 2.6 67 1323-1398 13-80 (118)
167 2bou_A EGF-like module contain 97.1 0.0003 1E-08 72.5 4.7 56 1335-1390 19-81 (143)
168 2wg3_C Hedgehog-interacting pr 97.1 0.0038 1.3E-07 77.0 15.2 201 1174-1388 176-451 (463)
169 3sjl_D Methylamine dehydrogena 97.1 0.055 1.9E-06 64.8 24.7 283 1202-1551 40-353 (386)
170 3ojy_A Complement component C8 97.1 0.00056 1.9E-08 85.6 7.6 35 868-902 68-103 (554)
171 1mda_H Methylamine dehydrogena 97.1 0.09 3.1E-06 62.7 26.5 136 1167-1311 34-191 (368)
172 3q6k_A 43.2 kDa salivary prote 97.1 0.11 3.7E-06 61.9 26.6 111 1432-1550 222-343 (381)
173 2oiz_A Aromatic amine dehydrog 97.1 0.29 9.8E-06 58.1 30.8 78 1195-1273 51-141 (361)
174 2iwa_A Glutamine cyclotransfer 97.1 0.038 1.3E-06 62.7 21.7 115 1196-1316 22-137 (266)
175 3c75_H MADH, methylamine dehyd 97.0 0.081 2.8E-06 64.3 25.9 288 1206-1561 84-401 (426)
176 3nok_A Glutaminyl cyclase; bet 97.0 0.01 3.5E-07 66.9 16.1 69 1244-1318 58-129 (268)
177 3q6k_A 43.2 kDa salivary prote 97.0 0.016 5.3E-07 69.1 18.5 156 1410-1576 136-326 (381)
178 3mbr_X Glutamine cyclotransfer 97.0 0.046 1.6E-06 61.0 21.1 79 1238-1318 18-98 (243)
179 1cru_A Protein (soluble quinop 97.0 0.0029 1E-07 78.0 12.5 134 1427-1563 24-207 (454)
180 1z1y_A Ookinete surface protei 96.9 0.00032 1.1E-08 75.7 3.1 61 1325-1389 17-86 (186)
181 2kl7_A Fibulin-4; secreted, ca 96.9 0.00039 1.3E-08 62.2 2.9 33 1076-1109 2-37 (71)
182 2mad_H Methylamine dehydrogena 96.9 0.66 2.3E-05 55.3 32.3 80 1482-1563 265-351 (373)
183 2w2n_E LDL receptor, low-densi 96.9 0.00046 1.6E-08 67.2 3.4 47 1350-1399 24-70 (107)
184 3qqz_A Putative uncharacterize 96.8 0.029 9.8E-07 63.3 18.0 134 1429-1569 69-211 (255)
185 4d90_A EGF-like repeat and dis 96.8 0.00064 2.2E-08 69.9 4.0 54 1328-1388 75-129 (143)
186 1yo8_A Thrombospondin-2; EGF, 96.7 0.0008 2.7E-08 84.8 4.9 61 1324-1388 15-82 (634)
187 2vj3_A Neurogenic locus notch 96.7 0.0013 4.3E-08 67.0 5.4 58 1324-1388 19-77 (135)
188 1emn_A Fibrillin; extracellula 96.7 0.00092 3.2E-08 61.7 3.9 35 1076-1112 43-78 (82)
189 1jof_A Carboxy-CIS,CIS-muconat 96.7 0.29 9.8E-06 57.9 26.9 122 1430-1561 145-290 (365)
190 1jmx_B Amine dehydrogenase; ox 96.7 0.55 1.9E-05 54.1 28.5 93 1167-1260 13-111 (349)
191 1qks_A Cytochrome CD1 nitrite 96.6 0.88 3E-05 57.5 31.3 103 1167-1273 169-276 (567)
192 2ece_A 462AA long hypothetical 96.6 0.25 8.4E-06 59.9 24.5 121 1435-1561 258-424 (462)
193 2hqs_A Protein TOLB; TOLB, PAL 96.6 0.39 1.3E-05 58.1 27.0 124 1431-1569 268-394 (415)
194 2ghs_A AGR_C_1268P; regucalcin 96.5 0.037 1.3E-06 64.8 16.9 119 1430-1568 134-266 (326)
195 2kl7_A Fibulin-4; secreted, ca 96.4 0.0022 7.5E-08 57.3 3.9 26 1355-1380 2-29 (71)
196 1x7a_L Coagulation factor IX, 96.3 0.0012 4.2E-08 68.0 2.1 40 1076-1116 84-124 (146)
197 3nok_A Glutaminyl cyclase; bet 96.3 0.13 4.3E-06 58.0 18.6 111 1431-1560 137-264 (268)
198 1szb_A Mannose binding lectin- 96.3 0.0019 6.6E-08 68.5 3.5 52 1341-1397 113-167 (170)
199 2w86_A Fibrillin-1, fibrillin1 96.2 0.0022 7.4E-08 66.3 3.2 39 1076-1115 106-145 (147)
200 1tpg_A T-plasminogen activator 96.2 0.0024 8.2E-08 60.2 3.1 53 1324-1387 23-81 (91)
201 3pe7_A Oligogalacturonate lyas 96.1 0.93 3.2E-05 53.3 26.6 128 1432-1562 240-384 (388)
202 1pby_B Quinohemoprotein amine 96.0 0.13 4.3E-06 59.2 17.9 122 1431-1564 35-165 (337)
203 1edm_B Factor IX; epidermal gr 96.0 0.0035 1.2E-07 48.9 3.0 32 1076-1110 2-35 (39)
204 1uzk_A Fibrillin-1; glycoprote 96.0 0.0021 7.3E-08 67.5 2.4 39 1076-1115 121-160 (162)
205 1nfu_B Coagulation factor XA, 96.0 0.0021 7.2E-08 69.3 2.2 39 1077-1116 80-119 (195)
206 2oiz_A Aromatic amine dehydrog 96.0 3.2 0.00011 48.9 30.3 73 1484-1561 257-333 (361)
207 2hqs_A Protein TOLB; TOLB, PAL 96.0 1.3 4.4E-05 53.5 27.1 82 1175-1259 159-241 (415)
208 1nir_A Nitrite reductase; hemo 95.9 1.7 5.8E-05 54.5 28.7 148 1167-1316 193-357 (543)
209 2ecf_A Dipeptidyl peptidase IV 95.9 1.4 4.8E-05 57.2 29.1 127 1430-1568 287-421 (741)
210 3mbr_X Glutamine cyclotransfer 95.9 0.8 2.7E-05 50.9 22.4 112 1198-1317 24-136 (243)
211 3f1s_B Vitamin K-dependent pro 95.9 0.0026 9E-08 73.3 2.4 41 1076-1116 1-41 (283)
212 1szb_A Mannose binding lectin- 95.9 0.0033 1.1E-07 66.6 3.0 40 1076-1116 123-165 (170)
213 3sre_A PON1, serum paraoxonase 95.9 0.034 1.2E-06 65.9 11.9 101 1429-1548 164-284 (355)
214 2ojh_A Uncharacterized protein 95.8 0.83 2.8E-05 50.8 23.2 94 1175-1272 22-119 (297)
215 2p9w_A MAL S 1 allergenic prot 95.8 0.062 2.1E-06 62.5 13.3 136 1430-1570 13-176 (334)
216 3f1s_B Vitamin K-dependent pro 95.7 0.0044 1.5E-07 71.4 3.3 42 1355-1397 1-43 (283)
217 1nzi_A Complement C1S componen 95.7 0.0049 1.7E-07 64.4 3.4 41 1076-1116 116-156 (159)
218 1aut_L Activated protein C; se 95.7 0.0041 1.4E-07 61.3 2.5 39 1077-1116 54-92 (114)
219 1mda_H Methylamine dehydrogena 95.5 0.63 2.2E-05 55.4 21.4 118 1438-1561 219-345 (368)
220 3t5o_A Complement component C6 95.5 0.0053 1.8E-07 82.0 3.6 37 548-585 118-154 (913)
221 3amr_A 3-phytase; beta-propell 95.5 0.4 1.4E-05 56.2 18.8 110 1443-1562 88-210 (355)
222 1fwx_A Nitrous oxide reductase 95.3 0.46 1.6E-05 59.5 19.5 275 1205-1555 100-413 (595)
223 3h5c_B Vitamin K-dependent pro 95.3 0.014 4.7E-07 68.4 5.6 40 1076-1115 42-81 (317)
224 3t5o_A Complement component C6 95.2 0.0082 2.8E-07 80.2 4.0 36 340-376 118-153 (913)
225 2wg3_C Hedgehog-interacting pr 95.1 0.16 5.4E-06 62.6 14.5 116 1430-1549 69-242 (463)
226 1qks_A Cytochrome CD1 nitrite 95.1 4.4 0.00015 51.0 28.2 100 1206-1311 166-272 (567)
227 1nzi_A Complement C1S componen 95.1 0.011 3.6E-07 61.8 3.4 52 1341-1397 106-158 (159)
228 2vh0_B Activated factor XA lig 95.1 0.0076 2.6E-07 61.1 2.2 38 1077-1115 80-118 (134)
229 1gl4_A Nidogen-1, entactin; im 94.9 0.0061 2.1E-07 68.7 0.9 38 1076-1114 4-43 (285)
230 3amr_A 3-phytase; beta-propell 94.7 0.41 1.4E-05 56.1 15.8 141 1168-1311 90-260 (355)
231 3nol_A Glutamine cyclotransfer 94.6 0.31 1.1E-05 54.8 13.8 113 1431-1560 128-254 (262)
232 1edm_B Factor IX; epidermal gr 94.5 0.017 5.9E-07 44.8 2.5 32 1355-1388 2-35 (39)
233 2c4f_L Coagulation factor VII 94.5 0.015 5.1E-07 59.6 2.8 39 1077-1116 85-127 (142)
234 4d90_A EGF-like repeat and dis 94.5 0.022 7.5E-07 58.2 4.1 61 1325-1387 13-90 (143)
235 1egf_A Epidermal growth factor 94.5 0.019 6.4E-07 48.0 2.9 35 1076-1110 2-40 (53)
236 2ecf_A Dipeptidyl peptidase IV 94.4 4.3 0.00015 52.5 26.6 121 1433-1568 340-465 (741)
237 1k32_A Tricorn protease; prote 93.9 12 0.00041 50.7 30.5 116 1431-1564 339-463 (1045)
238 2k2s_B Micronemal protein 6; m 93.7 0.021 7.3E-07 49.1 1.7 31 1076-1109 10-45 (61)
239 1fwx_A Nitrous oxide reductase 93.5 2.9 0.0001 52.3 21.0 75 1480-1562 276-361 (595)
240 3o4h_A Acylamino-acid-releasin 93.5 4.7 0.00016 50.5 23.8 109 1430-1562 195-315 (582)
241 1gl4_A Nidogen-1, entactin; im 93.4 0.025 8.6E-07 63.8 1.9 44 1354-1400 3-48 (285)
242 2z3z_A Dipeptidyl aminopeptida 93.3 14 0.00049 47.2 28.4 75 1486-1564 361-437 (706)
243 1jmx_B Amine dehydrogenase; ox 93.0 1.3 4.3E-05 51.0 16.0 148 1402-1562 13-175 (349)
244 2k2s_B Micronemal protein 6; m 92.9 0.037 1.3E-06 47.6 1.9 34 1353-1388 8-46 (61)
245 2ojh_A Uncharacterized protein 92.9 1.8 6.2E-05 47.9 16.7 124 1430-1568 85-212 (297)
246 2xdw_A Prolyl endopeptidase; a 92.7 21 0.00071 46.0 28.7 124 1437-1572 293-426 (710)
247 3u7u_G Neuregulin 1; signaling 92.4 0.056 1.9E-06 45.5 2.3 32 1076-1110 7-45 (55)
248 1tpg_A T-plasminogen activator 92.1 0.057 1.9E-06 50.7 2.2 40 1335-1386 2-41 (91)
249 1k32_A Tricorn protease; prote 91.6 18 0.00063 48.9 27.3 117 1431-1569 297-416 (1045)
250 1xfd_A DIP, dipeptidyl aminope 91.6 30 0.001 44.2 28.2 103 1175-1279 37-150 (723)
251 1k36_A Epiregulin; EGF-like fo 91.5 0.097 3.3E-06 42.3 2.7 35 1076-1110 2-39 (46)
252 1yr2_A Prolyl oligopeptidase; 91.4 11 0.00038 48.9 23.9 116 1439-1568 325-447 (741)
253 3pe7_A Oligogalacturonate lyas 91.4 7.8 0.00027 45.2 20.6 133 1430-1571 188-338 (388)
254 2bkl_A Prolyl endopeptidase; m 91.4 7.7 0.00026 50.0 22.2 119 1439-1571 280-406 (695)
255 2vj2_A Jagged-1; signalling, p 91.4 0.067 2.3E-06 56.4 2.0 49 1334-1388 113-165 (169)
256 3c5m_A Oligogalacturonate lyas 91.3 25 0.00087 40.6 29.5 81 1197-1280 38-119 (396)
257 3azo_A Aminopeptidase; POP fam 90.5 1.9 6.7E-05 55.0 15.2 131 1430-1568 130-280 (662)
258 4a9v_A PHOX; hydrolase, beta-p 90.1 1.8 6.2E-05 53.7 13.2 121 1429-1550 383-551 (592)
259 2pm9_A Protein WEB1, protein t 89.9 16 0.00053 42.9 21.4 77 1429-1519 262-338 (416)
260 2z3z_A Dipeptidyl aminopeptida 89.6 54 0.0019 41.7 31.5 82 1175-1259 101-199 (706)
261 1r5m_A SIR4-interacting protei 89.6 36 0.0012 39.6 30.4 115 1429-1562 289-425 (425)
262 1a3p_A Epidermal growth factor 89.1 0.21 7.1E-06 40.1 2.7 24 1087-1110 10-37 (45)
263 3u7u_G Neuregulin 1; signaling 89.0 0.22 7.5E-06 41.8 2.8 32 1355-1388 7-45 (55)
264 3c5m_A Oligogalacturonate lyas 88.8 25 0.00086 40.7 22.1 129 1430-1570 188-337 (396)
265 3azo_A Aminopeptidase; POP fam 88.4 3.3 0.00011 52.8 14.9 128 1429-1568 187-331 (662)
266 1egf_A Epidermal growth factor 88.3 0.23 7.9E-06 41.4 2.5 34 1355-1388 2-40 (53)
267 3ca7_A Protein spitz; argos, E 86.1 0.13 4.3E-06 42.8 -0.3 42 1335-1388 3-44 (52)
268 2ece_A 462AA long hypothetical 84.7 11 0.00039 45.5 15.5 128 1174-1301 227-399 (462)
269 1a3p_A Epidermal growth factor 84.1 0.67 2.3E-05 37.0 3.1 21 1368-1388 15-37 (45)
270 1n1i_A Merozoite surface prote 83.9 0.68 2.3E-05 43.6 3.4 61 1322-1387 20-85 (105)
271 3no2_A Uncharacterized protein 82.4 22 0.00074 40.0 16.2 76 1482-1568 126-202 (276)
272 3no2_A Uncharacterized protein 82.0 22 0.00075 39.9 16.1 138 1175-1317 56-198 (276)
273 1hae_A Heregulin-alpha; growth 79.9 0.66 2.3E-05 40.0 1.7 30 1078-1110 7-43 (63)
274 1nql_B Epidermal growth factor 77.9 0.99 3.4E-05 37.5 2.1 26 1085-1110 11-40 (53)
275 1xfd_A DIP, dipeptidyl aminope 77.8 1.6E+02 0.0054 37.3 25.5 58 1175-1235 91-151 (723)
276 1ob1_C Major merozoite surface 77.3 1.4 4.8E-05 41.3 3.1 59 1324-1387 16-84 (99)
277 2ymu_A WD-40 repeat protein; u 77.2 1.4E+02 0.0048 36.4 32.6 118 1429-1566 385-502 (577)
278 3zwl_B Eukaryotic translation 77.1 79 0.0027 35.6 19.2 124 1429-1561 115-248 (369)
279 3iuj_A Prolyl endopeptidase; h 76.8 18 0.00061 46.6 14.7 124 1437-1572 287-415 (693)
280 4fbr_A Lectin, myxobacterial h 76.7 0.15 5.1E-06 57.2 -4.3 60 1325-1388 45-131 (267)
281 1k36_A Epiregulin; EGF-like fo 76.5 0.9 3.1E-05 36.6 1.4 20 1369-1388 18-39 (46)
282 3o4h_A Acylamino-acid-releasin 76.4 20 0.00067 44.8 14.7 118 1431-1569 66-191 (582)
283 2xyi_A Probable histone-bindin 76.3 37 0.0013 40.4 16.6 124 1429-1561 181-308 (430)
284 4g56_B MGC81050 protein; prote 75.3 29 0.001 40.2 15.0 126 1430-1570 227-353 (357)
285 2gop_A Trilobed protease; beta 75.1 1.1E+02 0.0039 34.3 23.4 77 1175-1259 43-122 (347)
286 4a5s_A Dipeptidyl peptidase 4 74.3 32 0.0011 44.4 16.4 125 1434-1569 323-456 (740)
287 2xyi_A Probable histone-bindin 72.3 42 0.0014 39.9 15.7 110 1429-1549 231-341 (430)
288 2aq5_A Coronin-1A; WD40 repeat 72.2 1.5E+02 0.0051 34.4 22.1 101 1432-1545 223-329 (402)
289 1hae_A Heregulin-alpha; growth 71.4 1.3 4.4E-05 38.2 1.2 21 1368-1388 18-43 (63)
290 2vj2_A Jagged-1; signalling, p 71.1 1.6 5.4E-05 45.8 2.1 33 1076-1110 130-165 (169)
291 1nql_B Epidermal growth factor 71.0 1.8 6.3E-05 35.9 2.1 20 1369-1388 19-40 (53)
292 4a9v_A PHOX; hydrolase, beta-p 70.8 31 0.0011 42.9 13.6 108 1192-1300 381-548 (592)
293 3ei3_B DNA damage-binding prot 70.6 72 0.0024 36.7 16.9 107 1428-1548 117-223 (383)
294 3dem_A Complement factor MAsp- 70.3 2.1 7.1E-05 48.7 3.0 41 1076-1116 120-162 (278)
295 3jrp_A Fusion protein of prote 69.7 69 0.0024 36.3 16.3 122 1429-1561 147-288 (379)
296 2ymu_A WD-40 repeat protein; u 68.9 2.1E+02 0.0072 34.8 33.5 118 1429-1566 426-543 (577)
297 2aq5_A Coronin-1A; WD40 repeat 68.4 61 0.0021 37.8 15.7 114 1428-1548 80-195 (402)
298 4aqb_A Mannan-binding lectin s 67.8 12 0.00043 43.9 9.3 28 1085-1112 131-158 (361)
299 1nt0_A MAsp2, mannose-binding 67.4 2.1 7.1E-05 49.0 2.3 39 1077-1115 120-160 (286)
300 4aez_A CDC20, WD repeat-contai 67.2 1.2E+02 0.0042 35.1 18.1 121 1428-1562 216-336 (401)
301 3hxj_A Pyrrolo-quinoline quino 66.6 1.6E+02 0.0055 32.7 18.4 57 1483-1549 257-313 (330)
302 2vdu_B TRNA (guanine-N(7)-)-me 66.1 80 0.0027 37.6 16.4 116 1431-1561 104-228 (450)
303 1g1s_A P-selectin; selectin, l 64.8 2.5 8.6E-05 43.6 2.1 31 1077-1110 119-151 (162)
304 1yfq_A Cell cycle arrest prote 64.3 80 0.0027 35.3 15.2 108 1428-1546 100-211 (342)
305 4a11_B DNA excision repair pro 64.2 86 0.0029 36.0 15.7 105 1429-1548 99-205 (408)
306 1tl2_A L10, protein (tachylect 63.9 35 0.0012 37.2 10.7 105 1430-1548 41-152 (236)
307 3k26_A Polycomb protein EED; W 62.6 1.1E+02 0.0037 34.5 16.0 116 1430-1561 70-191 (366)
308 4aez_A CDC20, WD repeat-contai 62.5 2E+02 0.0068 33.3 18.7 116 1430-1562 177-293 (401)
309 1k8k_C P40, ARP2/3 complex 41 61.1 77 0.0026 36.0 14.4 107 1428-1548 51-161 (372)
310 3ow8_A WD repeat-containing pr 60.0 1.5E+02 0.0053 33.3 16.6 101 1430-1546 207-307 (321)
311 4gqb_B Methylosome protein 50; 59.3 1.5E+02 0.0051 34.0 16.4 105 1429-1545 169-273 (344)
312 2gop_A Trilobed protease; beta 57.4 91 0.0031 35.2 14.1 116 1430-1559 59-206 (347)
313 1gxr_A ESG1, transducin-like e 57.2 2.3E+02 0.0078 31.2 31.2 103 1429-1549 224-326 (337)
314 1nt0_A MAsp2, mannose-binding 56.7 5.2 0.00018 45.6 3.0 41 1355-1396 119-162 (286)
315 4e54_B DNA damage-binding prot 55.9 71 0.0024 37.9 13.2 106 1428-1547 163-268 (435)
316 1z68_A Fibroblast activation p 55.7 4E+02 0.014 33.5 26.1 96 1174-1277 35-144 (719)
317 3dem_A Complement factor MAsp- 55.7 6 0.0002 44.8 3.3 42 1355-1397 120-164 (278)
318 2pm9_A Protein WEB1, protein t 55.5 2.8E+02 0.0096 31.7 25.9 121 1429-1562 214-337 (416)
319 3zwl_B Eukaryotic translation 55.4 2.5E+02 0.0087 31.2 29.2 110 1429-1548 218-334 (369)
320 3ow8_A WD repeat-containing pr 55.3 2.3E+02 0.0079 31.8 17.0 101 1430-1547 165-266 (321)
321 3mkq_A Coatomer beta'-subunit; 55.2 4.2E+02 0.014 33.7 29.7 104 1167-1274 69-174 (814)
322 4gqb_B Methylosome protein 50; 54.9 1.7E+02 0.0058 33.5 15.9 103 1431-1548 216-318 (344)
323 3zwu_A Alkaline phosphatase PH 54.3 82 0.0028 39.5 13.5 120 1429-1549 383-550 (592)
324 4a5s_A Dipeptidyl peptidase 4 52.7 1E+02 0.0035 39.7 14.8 79 1483-1568 321-406 (740)
325 2xdw_A Prolyl endopeptidase; a 52.7 1.8E+02 0.006 37.1 17.0 123 1431-1562 126-268 (710)
326 3vl1_A 26S proteasome regulato 52.4 1E+02 0.0034 35.9 13.6 72 1481-1561 140-211 (420)
327 2vdu_B TRNA (guanine-N(7)-)-me 51.8 3.5E+02 0.012 31.7 30.2 60 1482-1549 309-373 (450)
328 3jrp_A Fusion protein of prote 51.7 2.9E+02 0.01 30.8 17.4 100 1429-1541 101-218 (379)
329 4g56_B MGC81050 protein; prote 49.1 1.6E+02 0.0056 33.7 14.6 104 1430-1545 182-285 (357)
330 1sq9_A Antiviral protein SKI8; 48.1 1.6E+02 0.0053 33.7 14.3 141 1398-1556 135-318 (397)
331 2xe4_A Oligopeptidase B; hydro 47.6 5.5E+02 0.019 32.8 22.6 70 1204-1273 124-211 (751)
332 3vl1_A 26S proteasome regulato 47.1 3.2E+02 0.011 31.4 16.9 76 1428-1519 138-213 (420)
333 1yr2_A Prolyl oligopeptidase; 46.3 2.8E+02 0.0097 35.4 17.5 125 1433-1569 212-359 (741)
334 3ca7_A Protein spitz; argos, E 45.1 7.4 0.00025 32.0 1.3 16 1095-1110 29-44 (52)
335 4ery_A WD repeat-containing pr 44.0 3.6E+02 0.012 29.5 20.0 104 1429-1548 65-168 (312)
336 1z68_A Fibroblast activation p 42.8 1.3E+02 0.0044 38.2 13.4 100 1432-1548 62-187 (719)
337 1g1s_A P-selectin; selectin, l 42.3 10 0.00034 39.0 2.1 21 1368-1388 131-151 (162)
338 1q4g_A Prostaglandin G/H synth 42.1 11 0.00037 47.1 2.7 31 1077-1110 2-36 (553)
339 3iuj_A Prolyl endopeptidase; h 40.7 4.2E+02 0.014 33.5 17.7 123 1432-1568 236-365 (693)
340 1pgu_A Actin interacting prote 40.4 2.5E+02 0.0087 34.1 15.3 145 1400-1561 456-615 (615)
341 3f3f_A Nucleoporin SEH1; struc 38.8 3.6E+02 0.012 29.3 15.0 173 1397-1576 20-216 (351)
342 2gy5_A Angiopoietin-1 receptor 38.7 12 0.0004 45.2 2.2 47 1334-1388 215-274 (423)
343 2xe4_A Oligopeptidase B; hydro 38.3 3.2E+02 0.011 35.1 16.1 117 1433-1562 224-354 (751)
344 3dw8_B Serine/threonine-protei 38.1 2.6E+02 0.0087 32.5 14.2 120 1429-1560 177-313 (447)
345 1k8k_C P40, ARP2/3 complex 41 36.9 4.8E+02 0.016 29.0 18.9 119 1429-1561 96-232 (372)
346 1erj_A Transcriptional repress 36.9 4.9E+02 0.017 29.8 16.3 103 1429-1547 165-274 (393)
347 3fm0_A Protein CIAO1; WDR39,SG 36.9 4.9E+02 0.017 29.1 17.0 121 1429-1562 105-227 (345)
348 2oit_A Nucleoporin 214KDA; NH2 35.6 3.5E+02 0.012 32.0 14.9 127 1430-1564 93-225 (434)
349 4fbr_A Lectin, myxobacterial h 35.5 4.8 0.00016 45.1 -1.7 31 1077-1110 99-131 (267)
350 2bkl_A Prolyl endopeptidase; m 35.3 6.3E+02 0.022 31.7 18.2 125 1433-1569 171-314 (695)
351 4h5i_A Guanine nucleotide-exch 35.0 5.1E+02 0.017 29.5 15.9 58 1481-1545 270-328 (365)
352 1vyh_C Platelet-activating fac 34.9 4E+02 0.014 30.9 15.1 57 1482-1545 340-396 (410)
353 1r5m_A SIR4-interacting protei 34.3 5.5E+02 0.019 29.0 29.1 103 1429-1548 247-349 (425)
354 3k26_A Polycomb protein EED; W 34.0 4.2E+02 0.014 29.3 14.7 74 1481-1561 70-146 (366)
355 3hxj_A Pyrrolo-quinoline quino 33.9 2.8E+02 0.0096 30.6 13.1 71 1481-1563 215-285 (330)
356 3zwu_A Alkaline phosphatase PH 33.7 75 0.0026 39.8 8.5 72 1478-1550 381-495 (592)
357 3mkq_A Coatomer beta'-subunit; 33.1 8.4E+02 0.029 30.7 31.8 99 1430-1544 185-285 (814)
358 3b7f_A Glycosyl hydrolase, BNR 32.3 1.9E+02 0.0066 33.6 11.6 110 1429-1548 54-196 (394)
359 3nt1_A Prostaglandin-endoperox 31.5 16 0.00054 45.7 1.8 31 1077-1110 1-35 (587)
360 1b9w_A Protein (merozoite surf 29.7 36 0.0012 31.3 3.3 61 1323-1387 15-80 (95)
361 3dwl_C Actin-related protein 2 29.2 1.6E+02 0.0056 33.4 10.1 108 1429-1548 100-224 (377)
362 1sqj_A OXG-RCBH, oligoxylogluc 29.1 4.1E+02 0.014 34.4 14.8 122 1430-1558 64-197 (789)
363 3dwl_C Actin-related protein 2 29.0 2.2E+02 0.0074 32.3 11.2 106 1429-1548 55-165 (377)
364 2pbi_B Guanine nucleotide-bind 28.4 6.7E+02 0.023 28.2 15.3 104 1429-1546 240-343 (354)
365 2ynn_A Coatomer subunit beta'; 28.2 6.2E+02 0.021 27.6 16.9 106 1429-1547 140-246 (304)
366 1tl2_A L10, protein (tachylect 25.6 5.2E+02 0.018 28.1 12.1 25 1432-1459 90-114 (236)
367 2pm7_B Protein transport prote 25.5 6.7E+02 0.023 27.2 16.7 76 1482-1563 206-288 (297)
368 1yfq_A Cell cycle arrest prote 24.9 7E+02 0.024 27.2 28.1 57 1482-1547 253-310 (342)
369 4e54_B DNA damage-binding prot 24.7 8.5E+02 0.029 28.1 24.9 78 1429-1518 250-327 (435)
370 1gxr_A ESG1, transducin-like e 24.4 6.9E+02 0.024 27.0 29.3 98 1174-1274 71-174 (337)
371 3iz6_a 40S ribosomal protein R 24.4 8.1E+02 0.028 27.7 17.5 125 1429-1564 249-377 (380)
372 3frx_A Guanine nucleotide-bind 24.2 7.4E+02 0.025 27.2 18.3 59 1481-1547 197-255 (319)
373 2pbi_B Guanine nucleotide-bind 24.2 7.9E+02 0.027 27.5 16.4 102 1430-1546 197-301 (354)
374 4aow_A Guanine nucleotide-bind 24.0 7.2E+02 0.025 27.0 16.4 106 1429-1545 38-144 (340)
375 1vyh_C Platelet-activating fac 23.4 8.8E+02 0.03 27.8 16.4 100 1429-1544 150-249 (410)
376 3b7f_A Glycosyl hydrolase, BNR 23.0 5.3E+02 0.018 29.7 13.2 118 1431-1559 116-259 (394)
377 1q4g_A Prostaglandin G/H synth 22.5 34 0.0012 42.6 2.5 30 1357-1388 3-36 (553)
378 1g1t_A E-selectin; EGF, adhesi 22.4 33 0.0011 34.7 1.9 25 1086-1110 125-151 (157)
379 2ynn_A Coatomer subunit beta'; 22.3 7.8E+02 0.027 26.8 18.1 101 1431-1547 57-158 (304)
380 1xdt_R Hbegf, heparin-binding 22.0 36 0.0012 30.6 1.8 17 1094-1110 57-73 (79)
381 2rnl_A Amphiregulin; AR, color 21.6 52 0.0018 26.8 2.5 20 1091-1110 24-45 (50)
382 3nt1_A Prostaglandin-endoperox 21.5 32 0.0011 43.0 1.9 30 1357-1388 2-35 (587)
383 3cfw_A L-selectin; EGF, cell a 21.2 42 0.0015 34.2 2.5 25 1086-1110 125-151 (164)
384 3gre_A Serine/threonine-protei 21.2 9.2E+02 0.031 27.5 15.0 153 1397-1557 223-437 (437)
385 1erj_A Transcriptional repress 20.9 9.5E+02 0.033 27.2 17.3 100 1431-1547 125-224 (393)
386 3ltf_D Protein spitz; receptor 20.7 32 0.0011 28.9 1.2 16 1095-1110 29-44 (58)
387 3jro_A Fusion protein of prote 20.0 6.6E+02 0.022 32.0 14.2 107 1429-1547 99-224 (753)
No 1
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=100.00 E-value=5.9e-87 Score=874.59 Aligned_cols=625 Identities=33% Similarity=0.752 Sum_probs=256.2
Q ss_pred CCCCCCCceecCCCeEEeCcccCCCCCCCCCCCCCCC--cccccccCCceecCC--CceecceeccCCCCCCCCCCCCCC
Q psy948 546 YRQCSESEFQCKNGKCIPAQWRCDHDEDCTDGSDEME--CGGFQCKNGTFQCSS--GHCIAAYFRCDGDRDCRDLSDEMN 621 (1576)
Q Consensus 546 ~~~C~~~~f~C~~g~Ci~~~~~CDg~~DC~dgsDE~~--C~~~~C~~~~f~C~~--g~Ci~~~~~Cdg~~dC~d~sDE~~ 621 (1576)
..+|...+|+|.+|+||+..|+|||+.||.|||||.+ |....|.+.+|+|.+ ++||+..|+|||..||.|||||.+
T Consensus 21 ~~~C~~~~f~C~~g~Ci~~~~~CDg~~dC~D~sDE~~~~C~~~~C~~~~f~C~~~~~~Ci~~~~~CDg~~dC~dgsDE~~ 100 (791)
T 3m0c_C 21 GDRCERNEFQCQDGKCISYKWVCDGSAECQDGSDESQETCLSVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQG 100 (791)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCcCcCccCCCCCCEEehhhcCCCCccCCCCCcccccccccCccCcCccccCCCCCCEeeccccCCCCcCcCCCcccCC
Confidence 3579999999999999999999999999999999997 888899999999998 899999999999999999999999
Q ss_pred CCCCCCCCcCCCCCceecCCCCceeccCcCCCCCCCCCCCCcCcccccCCCCccCcccccCcccccCCCCCCCCCCCCCC
Q psy948 622 CPPRYPGGRFCPEYKFQCASTHLCVEQSELCDGTDDCGDNSDETSSLCSNMNCTSLHKCIPKWLFCDGKDDCRDGSDELP 701 (1576)
Q Consensus 622 C~~~~~~~~~C~~~~f~C~~~~~Ci~~~~~Cdg~~dC~d~sDE~~~~c~~~~c~~~~~Ci~~~~~Cdg~~dC~dgsDE~~ 701 (1576)
|+.. .|+..+|+|.+ ++||+.+++|||..||+|+|||..+
T Consensus 101 C~~~-----~C~~~~f~C~~-g~Ci~~~~~CDg~~dC~dgsDE~~C---------------------------------- 140 (791)
T 3m0c_C 101 CPPK-----TCSQDEFRCHD-GKCISRQFVCDSDRDCLDGSDEASC---------------------------------- 140 (791)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCc-----cccCCeEECCC-CCEECHHHcCCCcccCCCCcccccc----------------------------------
Confidence 9753 68999999986 6677777777776666666666521
Q ss_pred CCCCCCCCCccccCCCCeEeccccccCCcCCCCCCCCcchhcccc------ccCCCCCCcccccCCceecccccCCCCCC
Q psy948 702 QNCPKCHETTDFQCKNNRCIPKRWMCDFENDCGDQSDEAEDLCAG------AYRQCSESEFQCKNGKCIPAQWRCDHDED 775 (1576)
Q Consensus 702 ~~c~~c~~~~~f~C~~~~Ci~~~~~Cdg~~dC~d~sDE~~~~c~~------~~~~C~~~~f~C~~g~CI~~~~~CDg~~D 775 (1576)
.-+.|. +.+|+|.+++|||..|+|||..||.|||||....|.. ....|++++|+|.+|.||+..|+|||..|
T Consensus 141 -~~~~C~-~~~f~C~~~~Ci~~~~~Cdg~~dC~dgsDE~~~~C~~~~~~~~~~~~C~~~~f~C~~g~Ci~~~~~CDg~~d 218 (791)
T 3m0c_C 141 -PVLTCG-PASFQCNSSTCIPQLWACDNDPDCEDGSDEWPQRCRGLYVFQGDSSPCSAFEFHCLSGECIHSSWRCDGGPD 218 (791)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -cccccc-cceeccCCCccccccccCCCCCcCCCCCCcccccCCCccccCCCCCCCCCCcccccCCceeccccccCCCCC
Confidence 101243 5899999999999999999999999999997555742 23579999999999999999999999999
Q ss_pred CCCCCCCcccCcceeeccCcceeeeeeeecccccCCcccccCCCCCCCCCCCcccCCccCCCCccccCCCcccCceeecC
Q psy948 776 CTDGSDEMECGGFQCKCVTMTRIVQMEVMKWNAAASNWRCDHDEDCTDGSDETECGGFQCKNGTFQCSSGHCIAAYFRCD 855 (1576)
Q Consensus 776 C~dgsDE~~C~~~~c~~~~~~~~~~~~~~~~~c~~~~~~Cdg~~dC~dgsDE~~C~~~~C~~~~f~C~~g~Ci~~~~~Cd 855 (1576)
|.|||||.+|... .|.+++
T Consensus 219 C~dgsDE~~C~~~---------------------------------------------~C~~~~---------------- 237 (791)
T 3m0c_C 219 CKDKSDEENCAVA---------------------------------------------TCRPDE---------------- 237 (791)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCCCCcccc---------------------------------------------ccCCCc----------------
Confidence 9999999887532 233333
Q ss_pred CCCCCCCCccCCCeeecCCCceecceeeeCCCCCCCCCCCCCCCCCCCCCCCCC-CCCcccccCCCceeccCccccCCCC
Q psy948 856 GDRDCRDLSELNGTFQCSSGHCIAAYFRCDGDRDCRDLSDEMNCPPRYPGGRFC-PEYKFQCASTHLCVEQSELCDGTDD 934 (1576)
Q Consensus 856 g~~dC~d~sde~~~f~C~~g~Ci~~~~~Cdg~~dC~d~sDE~~C~~~~~~~~~C-~~~~f~C~~~~~Ci~~~~~Cdg~~D 934 (1576)
|+|.+|.||+..|+|||..||.|+|||.+|... ..| .+.+|+|
T Consensus 238 --------------f~C~~g~Ci~~~~~Cdg~~dC~dgsDE~~C~~~----~~C~~~~~~~C------------------ 281 (791)
T 3m0c_C 238 --------------FQCSDGNCIHGSRQCDREYDCKDMSDEVGCVNV----TLCEGPNKFKC------------------ 281 (791)
T ss_dssp -----------------------------------------------------CCSTTCCCC------------------
T ss_pred --------------ceecCCceEecceecCChhccccccccCccccc----ccccCCCcccc------------------
Confidence 555667777888888888999999999988632 123 2334444
Q ss_pred CCCCCCCCcCcCCCCccCCCCeeecCCCceecCceecCCCcCCCCCCCCCCcccccccccccCCCCCCceeeCCCceecc
Q psy948 935 CGDNSDETSSLCSNMNCTSLHKYQCDNGRCIASYQLCDGVDNCGDGSDENNLTLCTVHTRVKPCELYSQYTCSNHKCIDR 1014 (1576)
Q Consensus 935 C~DgsDE~~~~C~~~~C~~~~~f~C~ng~Ci~~~~~CdG~~dC~DgsDE~~~~~c~~~~~~~~C~~~~~f~C~~g~Ci~~ 1014 (1576)
.+|.||+..++|++..+|.||+||... .|. ...|...
T Consensus 282 -------------------------~~G~Ci~~~~~Cd~~~dC~dgsDe~~~-~C~-----------------~~~C~~~ 318 (791)
T 3m0c_C 282 -------------------------HSGECITLDKVCNMARDCRDWSDEPIK-ECG-----------------TNECLDN 318 (791)
T ss_dssp -------------------------TTSCCCCSSCCSCSSCCSSSSCSCCCT-TBS-----------------CCSTTTG
T ss_pred -------------------------CCCcccccccccCCccccccccCcccc-ccc-----------------ccccccc
Confidence 444455555555555555555544320 010 0011111
Q ss_pred CcccCCcCCCCCCCcccCCCCCCCCCCCCCeeecCCceeccccccCCCCCCCCCCCCCCcccCccccccCCCccccccee
Q psy948 1015 AALCNHVDDCGDLSDELGCHKENSTCSSSQFRCNNGKCIDYHLVCNKESDCEDDSDEPLHCNVDECAKVETNQCGHKCVD 1094 (1576)
Q Consensus 1015 ~~~Cd~~~dC~dgsDE~~C~~~~~~C~~~~~~C~nG~Ci~~~~~C~~~~~C~D~sDe~~~cdidEC~~~~~~~Csq~C~N 1094 (1576)
...|.. .|.+....+ ...|..|.- + ..+..|. |||||+ .++.|+|+|+|
T Consensus 319 ~~~C~~--~C~~~~~~y------------~C~C~~Gy~----l--~~g~~C~---------dideC~--~~~~C~~~C~n 367 (791)
T 3m0c_C 319 NGGCSH--VCNDLKIGY------------ECLCPDGFQ----L--VAQRRCE---------DIDECQ--DPDTCSQLCVN 367 (791)
T ss_dssp GGGCSS--EEEECSBSE------------EEECCTTCE----E--ETTTEEE---------CCCCCS--SSSSCTTTCCB
T ss_pred ccCccc--cccCCCCCc------------ccCCCCCCc----c--CCCCccc---------cCcccC--CCCCCCCeeec
Confidence 111110 011000000 111222211 0 1122232 599998 46899999999
Q ss_pred CCCeeeeecCCCcccCCCCcccCC--C--CceeecceeEE--------------------eeEee-ccceEEEEeeeecc
Q psy948 1095 TLTGYYCECNTGYNDDDIGTVSPS--S--NKVLTRSTVIY--------------------HVRIW-SSNVLVMADVYSTR 1149 (1576)
Q Consensus 1095 t~Gsy~C~C~~Gy~l~~~~~~~~~--~--~~~~~~~~~~~--------------------~~~~~-~~~~~~~~d~~~~~ 1149 (1576)
++|||+|.|++||+|.+.+..+.. . ..+++....|+ .+.+. ..+.|||+|+...+
T Consensus 368 ~~gsy~C~C~~Gy~l~~~~~~C~~~~~~p~Ll~an~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~ 447 (791)
T 3m0c_C 368 LEGGYKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRM 447 (791)
T ss_dssp CSSCBCCCCCSSEECCSSCCCCEETTSCCEEEEECBSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTE
T ss_pred CCCCceeecCCCCEeCCCCceeeecccccccccccccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeecccee
Confidence 999999999999999766544321 1 11222222111 11222 24678888753211
Q ss_pred -------Cc--------ee-----ecceEEEEeeecceeEEecCCCeEEEEeccCCceEecc-cccCCcceEEEeCCcce
Q psy948 1150 -------GS--------VM-----ENRTVKMEVTKIPLCALDVRSIKLDVAELDGTNRKTLK-TAIQDPRGITLHPGIGY 1208 (1576)
Q Consensus 1150 -------~~--------~~-----~~~~~~~~~~~~~~~avD~~~~~I~v~~ldG~~r~~l~-~~l~~P~~iavdP~~g~ 1208 (1576)
+. +. ....+.+++....|||+|+...+|.|++++|+.+++|+ ..+..|++|||||..|+
T Consensus 448 I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~ 527 (791)
T 3m0c_C 448 ICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGF 527 (791)
T ss_dssp EEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTE
T ss_pred EEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCC
Confidence 10 00 01122233334468888888999999999999998886 57899999999999999
Q ss_pred EEEecCCCcCeEEEEecCCCCcEEEEeccCCCCCcceEEEeccCCeEEEEcCCCCeEEEEeCCCCceEEEEeC-CCccce
Q psy948 1209 VYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISG-QKVPHV 1287 (1576)
Q Consensus 1209 lywtd~g~~~~I~ra~mdGs~~~~iv~~~~~l~~P~gLaiD~~~~rlYw~D~~~~~I~s~~~dG~~r~~v~~~-~~~~~P 1287 (1576)
|||+||+..++|+|+.|+|+.+++|+. ..+.||+|||||+.+++|||+|++.++|++++++|+.+++++.. ..+++|
T Consensus 528 LYwtD~g~~~~I~~~~~dG~~~~~lv~--~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P 605 (791)
T 3m0c_C 528 MYWTDWGTPAKIKKGGLNGVDIYSLVT--ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHP 605 (791)
T ss_dssp EEEEECSSSCEEEEEETTSCCEEEEEC--SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSE
T ss_pred EEEecCCCCCeEEEEecCCCceEEEEe--CCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCC
Confidence 999999998999999999999888875 57899999999999999999999999999999999999998864 468999
Q ss_pred eEEeeeCCeEEEeccCCCcceeeccccccccccceecccccccCCCcceeeccCCceeccCCCccccCCCCccC---CCC
Q psy948 1288 FALTLFEDHIYWTDWNTKSINRADKFNAREIQAGILHHCMNITGGSGYLCTCYQGFIIDKNNAKKCLDVDECAT---GIH 1364 (1576)
Q Consensus 1288 ~~lavfed~lYwtd~~~~~i~~~~k~~~~~~~~~~~~~c~n~~g~~~~~C~C~~G~~~~~~~~~~c~d~neC~~---~~~ 1364 (1576)
|+|++++++|||+||.+++|++++|++|+.+..... ++.. |.+..+... .++....|+|.. +|+
T Consensus 606 ~glav~~~~lYwtD~~~~~I~~~dk~tG~~~~~l~~----~l~~--------P~~i~v~h~-~~Qp~~~N~C~~~~~~ng 672 (791)
T 3m0c_C 606 FSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAE----NLLS--------PEDMVLFHN-LTQPRGVNWCERTTLSNG 672 (791)
T ss_dssp EEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEEC----SCSC--------CCCEEEESG-GGSCCCCCTTTSSSSGGG
T ss_pred CEEEEeCCEEEEEECCCCEEEEEeCCCCcceEEeec----CCCC--------ceeEeeecc-ccCCCCCCcccccCCCCc
Confidence 999999999999999999999999999987654321 1111 344544432 344556899986 789
Q ss_pred ccccccccCCC------ceEEEcCCCcEecCCCCCceeccC
Q psy948 1365 HCSQVCTNLNG------TYACSCNAGFTLSDGLSGVCKAND 1399 (1576)
Q Consensus 1365 ~Cs~lC~n~~g------sy~C~Cp~G~~l~d~~~~~C~~~~ 1399 (1576)
+|+|||++.++ +|+|+||.||.|..+.+ +|....
T Consensus 673 ~CshlCl~~p~~~~~~~~~~C~Cp~g~~L~~d~~-tC~~~~ 712 (791)
T 3m0c_C 673 GCQYLCLPAPQINPHSPKFTCACPDGMLLARDMR-SCLTEA 712 (791)
T ss_dssp GCSSEEEECCCCSTTCCSEEEECCTTCEECTTSS-CEEC--
T ss_pred CcCeeecCCCCcCCCCCCceeECCCCCEECCCCC-cCCCCC
Confidence 99999998764 79999999999986544 797643
No 2
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=100.00 E-value=1.8e-83 Score=840.13 Aligned_cols=624 Identities=33% Similarity=0.755 Sum_probs=413.3
Q ss_pred CCCCCCceecCCCeEEeCcccCCCCCCCCCCCCCCC--cccccccCCceecCCC--ceecceeccCCCCCCCCCCCCCCC
Q psy948 547 RQCSESEFQCKNGKCIPAQWRCDHDEDCTDGSDEME--CGGFQCKNGTFQCSSG--HCIAAYFRCDGDRDCRDLSDEMNC 622 (1576)
Q Consensus 547 ~~C~~~~f~C~~g~Ci~~~~~CDg~~DC~dgsDE~~--C~~~~C~~~~f~C~~g--~Ci~~~~~Cdg~~dC~d~sDE~~C 622 (1576)
.+|.+.+|+|.+|+||+..|+|||+.||.|||||.+ |...+|+..+|+|.++ +||+..|+|||..||.|||||.+|
T Consensus 4 ~~C~~~~f~C~~g~ci~~~~~Cdg~~dC~d~sDE~~~~C~~~~C~~~~f~C~~~~~~Ci~~~~~Cdg~~dC~dgsDE~~C 83 (699)
T 1n7d_A 4 DRCERNEFQCQDGKCISYKWVCDGSAECQDGSDESQETCLSVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGC 83 (699)
T ss_dssp ----------------------------------------CCSCSSSSCCCCC--CCCCCSSSTTSSSCCC-CCCTTTSC
T ss_pred CCCCccceeCCCCcEEcHHhcCCCcccCCCCCCCCccccCCcCCCCCccCCCCCCCceeCcceecCCcccCCCCcccCcc
Confidence 578899999999999999999999999999999998 9888899999999874 799999999999999999999999
Q ss_pred CCCCCCCcCCCCCceecCCCCceeccCcCCCCCCCCCCCCcCcccccCCCCccCcccccCcccccCCCCCCCCCCCCCCC
Q psy948 623 PPRYPGGRFCPEYKFQCASTHLCVEQSELCDGTDDCGDNSDETSSLCSNMNCTSLHKCIPKWLFCDGKDDCRDGSDELPQ 702 (1576)
Q Consensus 623 ~~~~~~~~~C~~~~f~C~~~~~Ci~~~~~Cdg~~dC~d~sDE~~~~c~~~~c~~~~~Ci~~~~~Cdg~~dC~dgsDE~~~ 702 (1576)
+.. .|+..+|+|.+ ++||+.+++|||..||.|+|||..+
T Consensus 84 ~~~-----~C~~~~f~C~~-g~Ci~~~~~Cdg~~dC~dgsDE~~C----------------------------------- 122 (699)
T 1n7d_A 84 PPK-----TCSQDEFRCHD-GKCISRQFVCDSDRDCLDGSDEASC----------------------------------- 122 (699)
T ss_dssp SSC-----CCCSSCCCSSC-C----CCCTTCSSCCSSSSCSSSSC-----------------------------------
T ss_pred ccc-----ccccCcEEcCC-CCEecHHHcCCCcCcCCCCCccCCc-----------------------------------
Confidence 853 68899999986 6777777777777777777766521
Q ss_pred CCCCCCCCccccCCCCeEeccccccCCcCCCCCCCCcchhcccc------ccCCCCCCcccccCCceecccccCCCCCCC
Q psy948 703 NCPKCHETTDFQCKNNRCIPKRWMCDFENDCGDQSDEAEDLCAG------AYRQCSESEFQCKNGKCIPAQWRCDHDEDC 776 (1576)
Q Consensus 703 ~c~~c~~~~~f~C~~~~Ci~~~~~Cdg~~dC~d~sDE~~~~c~~------~~~~C~~~~f~C~~g~CI~~~~~CDg~~DC 776 (1576)
.-..|. +.+|+|.+++|||..|+|||..||.|||||....|.. ....|++.+|+|.+|+||+..|+|||..||
T Consensus 123 ~~~~C~-~~~f~C~~~~Ci~~~~~Cdg~~dC~dgsDE~~~~C~~~~~~~~~~~~C~~~~f~C~~g~Ci~~~~~CDg~~dC 201 (699)
T 1n7d_A 123 PVLTCG-PASFQCNSSTCIPQLWACDNDPDCEDGSDEWPQRCRGLYVFQGDSSPCSAFEFHCLSGECIHSSWRCDGGPDC 201 (699)
T ss_dssp CCCCCC-SSCCCCSSSCCCCTTSTTCSSCCSSSSSSSSCSSSSCCCCCSSCCCCSCSSSCCCSSSCCCSTTCTTSSSCCS
T ss_pred CccccC-ccccCCCCCcccchhcccCCCCcCCCCcccccccCCCcccccCCCCCCCCcceecCCCceEechhccCCCCCC
Confidence 111243 5899999999999999999999999999995445753 234799999999999999999999999999
Q ss_pred CCCCCCcccCcceeeccCcceeeeeeeecccccCCcccccCCCCCCCCCCCcccCCccCCCCccccCCCcccCceeecCC
Q psy948 777 TDGSDEMECGGFQCKCVTMTRIVQMEVMKWNAAASNWRCDHDEDCTDGSDETECGGFQCKNGTFQCSSGHCIAAYFRCDG 856 (1576)
Q Consensus 777 ~dgsDE~~C~~~~c~~~~~~~~~~~~~~~~~c~~~~~~Cdg~~dC~dgsDE~~C~~~~C~~~~f~C~~g~Ci~~~~~Cdg 856 (1576)
.|||||.+|... .|.+.
T Consensus 202 ~dgsDE~~C~~~---------------------------------------------~C~~~------------------ 218 (699)
T 1n7d_A 202 KDKSDEENCAVA---------------------------------------------TCRPD------------------ 218 (699)
T ss_dssp TTSCSSCSCCCC---------------------------------------------CCCSS------------------
T ss_pred CCCcccccCCCc---------------------------------------------ccCCC------------------
Confidence 999999987531 23333
Q ss_pred CCCCCCCccCCCeeecCCCceecceeeeCCCCCCCCCCCCCCCCCCCCCCCCC-CCCcccccCCCceeccCccccCCCCC
Q psy948 857 DRDCRDLSELNGTFQCSSGHCIAAYFRCDGDRDCRDLSDEMNCPPRYPGGRFC-PEYKFQCASTHLCVEQSELCDGTDDC 935 (1576)
Q Consensus 857 ~~dC~d~sde~~~f~C~~g~Ci~~~~~Cdg~~dC~d~sDE~~C~~~~~~~~~C-~~~~f~C~~~~~Ci~~~~~Cdg~~DC 935 (1576)
+|+|.+|.||+..|+|||..||.|+|||.+|... ..| .+.+|+|.
T Consensus 219 ------------~f~C~~g~Ci~~~~~Cdg~~dC~dgsde~~C~~~----~~C~~~~~~~C~------------------ 264 (699)
T 1n7d_A 219 ------------EFQCSDGNCIHGSRQCDREYDCKDMSDEVGCVNV----TLCEGPNKFKCH------------------ 264 (699)
T ss_dssp ------------EEESSSSCEEETTCCSSSCCCSSSSCSSSSTTCC----CCCCSTTCCCCT------------------
T ss_pred ------------cEecCCCceeeeecccCCCCCCCCCCccCCCCCC----CcccCCCceecC------------------
Confidence 4666777888888999999999999999988642 234 23445554
Q ss_pred CCCCCCCcCcCCCCccCCCCeeecCCCceecCceecCCCcCCCCCCCCCCcccccccccccCCCCCCceeeCCCceeccC
Q psy948 936 GDNSDETSSLCSNMNCTSLHKYQCDNGRCIASYQLCDGVDNCGDGSDENNLTLCTVHTRVKPCELYSQYTCSNHKCIDRA 1015 (1576)
Q Consensus 936 ~DgsDE~~~~C~~~~C~~~~~f~C~ng~Ci~~~~~CdG~~dC~DgsDE~~~~~c~~~~~~~~C~~~~~f~C~~g~Ci~~~ 1015 (1576)
+|+||+.+++|++..+|.|++||... .|. ...|....
T Consensus 265 -------------------------~g~Ci~~~~~Cd~~~dC~dgsDe~~~-~C~-----------------~~eC~~~~ 301 (699)
T 1n7d_A 265 -------------------------SGECITLDKVCNMARDCRDWSDEPIK-ECG-----------------TNECLDNN 301 (699)
T ss_dssp -------------------------TSCCCCSSCCSCSSCCSSSSCSCCCS-SCC-----------------CCCTTSST
T ss_pred -------------------------CCcEeCCcccccccceecCccccccc-ccc-----------------cccccccc
Confidence 44444444444444444444444310 010 00111111
Q ss_pred cccCCcCCCCCCCcccCCCCCCCCCCCCCeeecCCceeccccccCCCCCCCCCCCCCCcccCccccccCCCcccccceeC
Q psy948 1016 ALCNHVDDCGDLSDELGCHKENSTCSSSQFRCNNGKCIDYHLVCNKESDCEDDSDEPLHCNVDECAKVETNQCGHKCVDT 1095 (1576)
Q Consensus 1016 ~~Cd~~~dC~dgsDE~~C~~~~~~C~~~~~~C~nG~Ci~~~~~C~~~~~C~D~sDe~~~cdidEC~~~~~~~Csq~C~Nt 1095 (1576)
..|.+ .|.+....+.| .|..| |.+ ..+..|. +||||+. +++|+|+|+|+
T Consensus 302 ~~C~~--~C~~~~~~~~C------------~C~~G----~~~--~~~~~C~---------dideC~~--~~~C~~~C~n~ 350 (699)
T 1n7d_A 302 GGCSH--VCNDLKIGYEC------------LCPDG----FQL--VAQRRCE---------DIDECQD--PDTCSQLCVNL 350 (699)
T ss_dssp TTSCT--TCCCCTTCCCC------------CCCSS----SCC--CSSSCCC---------CCCCCSS--SSSCTTTCCBC
T ss_pred cCcCC--CcccCCCCcEE------------eCCCC----eEc--CCCCccc---------CccccCC--CCccccccccC
Confidence 11110 01111111111 12222 111 1223344 4999984 68999999999
Q ss_pred CCeeeeecCCCcccCCCCcccCC----CCceeecceeEE--------------------eeEee-ccceEEEEeeeeccC
Q psy948 1096 LTGYYCECNTGYNDDDIGTVSPS----SNKVLTRSTVIY--------------------HVRIW-SSNVLVMADVYSTRG 1150 (1576)
Q Consensus 1096 ~Gsy~C~C~~Gy~l~~~~~~~~~----~~~~~~~~~~~~--------------------~~~~~-~~~~~~~~d~~~~~~ 1150 (1576)
+|||+|.|++||.|...+..+.. ...+++....|+ .+.+. ..+.|||+|+...+.
T Consensus 351 ~g~y~C~C~~G~~~~~~~~~C~~~~~~~~ll~~~~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I 430 (699)
T 1n7d_A 351 EGGYKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMI 430 (699)
T ss_dssp SSCBCCCCCSSCBCCSSCCCCBCCSSCCCBCCCCTTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSB
T ss_pred CCCeeeeeecccccCCCCCcccccccceeEEecCccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCCeE
Confidence 99999999999999765543321 112222211111 11122 246788887532211
Q ss_pred cee--------------------ecceEEEEeeecceeEEecCCCeEEEEeccCCceEecc-cccCCcceEEEeCCcceE
Q psy948 1151 SVM--------------------ENRTVKMEVTKIPLCALDVRSIKLDVAELDGTNRKTLK-TAIQDPRGITLHPGIGYV 1209 (1576)
Q Consensus 1151 ~~~--------------------~~~~~~~~~~~~~~~avD~~~~~I~v~~ldG~~r~~l~-~~l~~P~~iavdP~~g~l 1209 (1576)
... ....+.+++....+||+|....+|.|++++|..+++|+ ..+..|++|||||..|+|
T Consensus 431 ~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~l 510 (699)
T 1n7d_A 431 CSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFM 510 (699)
T ss_dssp EEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCC
T ss_pred EEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcE
Confidence 100 00111222234467888888899999999999988875 568999999999999999
Q ss_pred EEecCCCcCeEEEEecCCCCcEEEEeccCCCCCcceEEEeccCCeEEEEcCCCCeEEEEeCCCCceEEEEeC-CCcccee
Q psy948 1210 YFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISG-QKVPHVF 1288 (1576)
Q Consensus 1210 ywtd~g~~~~I~ra~mdGs~~~~iv~~~~~l~~P~gLaiD~~~~rlYw~D~~~~~I~s~~~dG~~r~~v~~~-~~~~~P~ 1288 (1576)
||++|+..++|+|+.|+|+.+++++. ..+.||+|||||+.+++|||+|...++|++++++|+++++++.. ..+.+|+
T Consensus 511 y~td~~~~~~I~~~~~dG~~~~~l~~--~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~ 588 (699)
T 1n7d_A 511 YWTDWGTPAKIKKGGLNGVDIYSLVT--ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPF 588 (699)
T ss_dssp EECCCSSSCCEEBCCSSSCCCCEESC--SSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCC
T ss_pred EEcccCCCCeEEEEeCCCCCeeEEEe--CCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCce
Confidence 99999988999999999999877654 46899999999999999999999999999999999999988753 4689999
Q ss_pred EEeeeCCeEEEeccCCCcceeeccccccccccceecccccccCCCcceeeccCCceeccCCCccccCCCCccCC---CCc
Q psy948 1289 ALTLFEDHIYWTDWNTKSINRADKFNAREIQAGILHHCMNITGGSGYLCTCYQGFIIDKNNAKKCLDVDECATG---IHH 1365 (1576)
Q Consensus 1289 ~lavfed~lYwtd~~~~~i~~~~k~~~~~~~~~~~~~c~n~~g~~~~~C~C~~G~~~~~~~~~~c~d~neC~~~---~~~ 1365 (1576)
+|++++++|||++|.+++|.++++++++.+..... .+.. |.+..+.+. .++....|+|..+ |++
T Consensus 589 glavd~~~lywtd~~~~~V~~~d~~~G~~~~~i~~----~~~~--------P~~i~v~~~-~~qp~~~n~C~~~~~~ng~ 655 (699)
T 1n7d_A 589 SLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAE----NLLS--------PEDMVLFHQ-LTQPRGVNWCERTTLSNGG 655 (699)
T ss_dssp CCEEETTEEEEECSTTTCEEEEETTTEEEEECCCT----TCSS--------CCCCCBCSS-SSSCCSCCSSCSSSCSSCS
T ss_pred EeEEECCEEEEEeCCCCeEEEEEccCCCceEEeec----CCCC--------CcEEEEeCc-ccCCCCCCCccccCCCCCC
Confidence 99999999999999999999999998876543211 1111 334444332 3444567999986 899
Q ss_pred cccccccCC------CceEEEcCCCcEecCCCCCceeccC
Q psy948 1366 CSQVCTNLN------GTYACSCNAGFTLSDGLSGVCKAND 1399 (1576)
Q Consensus 1366 Cs~lC~n~~------gsy~C~Cp~G~~l~d~~~~~C~~~~ 1399 (1576)
|+||||++| .+|+|+||.||.|..+.+ +|....
T Consensus 656 Cs~lCl~~p~~~~~~~~~~C~Cp~g~~l~~d~~-~C~~~~ 694 (699)
T 1n7d_A 656 CQYLCLPAPQINPHSPKFTCACPDGMLLARDMR-SCLTEA 694 (699)
T ss_dssp CTTCCBCCCCCTTCSCSCBCCCCSSCEECSSTT-CEECC-
T ss_pred CCcccCcCcccCCCCCCcEEECcCCCEECCCCC-ccCCCC
Confidence 999999764 479999999999985543 798653
No 3
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=100.00 E-value=8.2e-81 Score=816.49 Aligned_cols=523 Identities=37% Similarity=0.792 Sum_probs=247.9
Q ss_pred CccccCCCCeEeccccccCCcCCCCCCCCcchhccccccCCCCCCcccccC--CceecccccCCCCCCCCCCCCCcccCc
Q psy948 710 TTDFQCKNNRCIPKRWMCDFENDCGDQSDEAEDLCAGAYRQCSESEFQCKN--GKCIPAQWRCDHDEDCTDGSDEMECGG 787 (1576)
Q Consensus 710 ~~~f~C~~~~Ci~~~~~Cdg~~dC~d~sDE~~~~c~~~~~~C~~~~f~C~~--g~CI~~~~~CDg~~DC~dgsDE~~C~~ 787 (1576)
+.+|+|.+|+|||..|+|||.+||+|+|||.+..|. ..+|++.+|+|.+ |+|||..|+|||+.||.|||||.+|..
T Consensus 26 ~~~f~C~~g~Ci~~~~~CDg~~dC~D~sDE~~~~C~--~~~C~~~~f~C~~~~~~Ci~~~~~CDg~~dC~dgsDE~~C~~ 103 (791)
T 3m0c_C 26 RNEFQCQDGKCISYKWVCDGSAECQDGSDESQETCL--SVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGCPP 103 (791)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCccCCCCCCEEehhhcCCCCccCCCCCcccccccc--cCccCcCccccCCCCCCEeeccccCCCCcCcCCCcccCCccC
Confidence 589999999999999999999999999999876664 3679999999998 899999999999999999999998753
Q ss_pred ceeeccCcceeeeeeeecccccCCcccccCCCCCCCCCCCcccCCccCCCCccccCCCcccCceeecCCCCCCCCCccCC
Q psy948 788 FQCKCVTMTRIVQMEVMKWNAAASNWRCDHDEDCTDGSDETECGGFQCKNGTFQCSSGHCIAAYFRCDGDRDCRDLSELN 867 (1576)
Q Consensus 788 ~~c~~~~~~~~~~~~~~~~~c~~~~~~Cdg~~dC~dgsDE~~C~~~~C~~~~f~C~~g~Ci~~~~~Cdg~~dC~d~sde~ 867 (1576)
. .|++++
T Consensus 104 ~---------------------------------------------~C~~~~---------------------------- 110 (791)
T 3m0c_C 104 K---------------------------------------------TCSQDE---------------------------- 110 (791)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred c---------------------------------------------cccCCe----------------------------
Confidence 2 243444
Q ss_pred CeeecCCCceecceeeeCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCceeccCccccCCCCCCCCCCCCcCcCC
Q psy948 868 GTFQCSSGHCIAAYFRCDGDRDCRDLSDEMNCPPRYPGGRFCPEYKFQCASTHLCVEQSELCDGTDDCGDNSDETSSLCS 947 (1576)
Q Consensus 868 ~~f~C~~g~Ci~~~~~Cdg~~dC~d~sDE~~C~~~~~~~~~C~~~~f~C~~~~~Ci~~~~~Cdg~~DC~DgsDE~~~~C~ 947 (1576)
|+|.+|+||+..|+|||..||.|+|||.+|+.. .|++.+|+|.++ .||+..|+|||..||.|||||....|.
T Consensus 111 --f~C~~g~Ci~~~~~CDg~~dC~dgsDE~~C~~~-----~C~~~~f~C~~~-~Ci~~~~~Cdg~~dC~dgsDE~~~~C~ 182 (791)
T 3m0c_C 111 --FRCHDGKCISRQFVCDSDRDCLDGSDEASCPVL-----TCGPASFQCNSS-TCIPQLWACDNDPDCEDGSDEWPQRCR 182 (791)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --EECCCCCEECHHHcCCCcccCCCCccccccccc-----ccccceeccCCC-ccccccccCCCCCcCCCCCCcccccCC
Confidence 556667788888888889999999999999753 699999999986 899999999999999999999866673
Q ss_pred --------CCccCCCCeeecCCCceecCceecCCCcCCCCCCCCCCcccccccccccCCCCCCceeeCCCceeccCcccC
Q psy948 948 --------NMNCTSLHKYQCDNGRCIASYQLCDGVDNCGDGSDENNLTLCTVHTRVKPCELYSQYTCSNHKCIDRAALCN 1019 (1576)
Q Consensus 948 --------~~~C~~~~~f~C~ng~Ci~~~~~CdG~~dC~DgsDE~~~~~c~~~~~~~~C~~~~~f~C~~g~Ci~~~~~Cd 1019 (1576)
...|. ..+|+|.+++||+..|+|||..||.|++||.+|. ..+|. ..+|+|.++.||+..++||
T Consensus 183 ~~~~~~~~~~~C~-~~~f~C~~g~Ci~~~~~CDg~~dC~dgsDE~~C~-------~~~C~-~~~f~C~~g~Ci~~~~~Cd 253 (791)
T 3m0c_C 183 GLYVFQGDSSPCS-AFEFHCLSGECIHSSWRCDGGPDCKDKSDEENCA-------VATCR-PDEFQCSDGNCIHGSRQCD 253 (791)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CccccCCCCCCCC-CCcccccCCceeccccccCCCCCCCCCCCCCCcc-------ccccC-CCcceecCCceEecceecC
Confidence 23464 4789999999999999999999999999998753 12464 3689999999999999999
Q ss_pred CcCCCCCCCcccCCCCCCCCC-CCCCeeecCCceeccccccCCCCCCCCCCCCCC-cccCccccccCCCcccccceeCCC
Q psy948 1020 HVDDCGDLSDELGCHKENSTC-SSSQFRCNNGKCIDYHLVCNKESDCEDDSDEPL-HCNVDECAKVETNQCGHKCVDTLT 1097 (1576)
Q Consensus 1020 ~~~dC~dgsDE~~C~~~~~~C-~~~~~~C~nG~Ci~~~~~C~~~~~C~D~sDe~~-~cdidEC~~~~~~~Csq~C~Nt~G 1097 (1576)
+..||.|++||.+|.... .| .+.+|.|.+|.||+...+|+...+|.+++||.. .|++|||.. +++.|+|.|+|++|
T Consensus 254 g~~dC~dgsDE~~C~~~~-~C~~~~~~~C~~G~Ci~~~~~Cd~~~dC~dgsDe~~~~C~~~~C~~-~~~~C~~~C~~~~~ 331 (791)
T 3m0c_C 254 REYDCKDMSDEVGCVNVT-LCEGPNKFKCHSGECITLDKVCNMARDCRDWSDEPIKECGTNECLD-NNGGCSHVCNDLKI 331 (791)
T ss_dssp --------------------CCSTTCCCCTTSCCCCSSCCSCSSCCSSSSCSCCCTTBSCCSTTT-GGGGCSSEEEECSB
T ss_pred ChhccccccccCcccccc-cccCCCccccCCCcccccccccCCccccccccCccccccccccccc-cccCccccccCCCC
Confidence 999999999999997533 35 467899999999999999999999999999976 489999986 57899999999999
Q ss_pred eeeeecCCCcccCCCCcccCCCCceeecceeEEeeEeeccceEEEEeeeeccCceeecceEEEEeeecceeEEecCCCeE
Q psy948 1098 GYYCECNTGYNDDDIGTVSPSSNKVLTRSTVIYHVRIWSSNVLVMADVYSTRGSVMENRTVKMEVTKIPLCALDVRSIKL 1177 (1576)
Q Consensus 1098 sy~C~C~~Gy~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~avD~~~~~I 1177 (1576)
+|+|.|++||+|.
T Consensus 332 ~y~C~C~~Gy~l~------------------------------------------------------------------- 344 (791)
T 3m0c_C 332 GYECLCPDGFQLV------------------------------------------------------------------- 344 (791)
T ss_dssp SEEEECCTTCEEE-------------------------------------------------------------------
T ss_pred CcccCCCCCCccC-------------------------------------------------------------------
Confidence 9999999999531
Q ss_pred EEEeccCCceEecccccCCcceEEEeCCcceEEEecCCCcCeEEEEecCCCCcEEEEeccCCCCCcceEEEeccCCeEEE
Q psy948 1178 DVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYW 1257 (1576)
Q Consensus 1178 ~v~~ldG~~r~~l~~~l~~P~~iavdP~~g~lywtd~g~~~~I~ra~mdGs~~~~iv~~~~~l~~P~gLaiD~~~~rlYw 1257 (1576)
T Consensus 345 -------------------------------------------------------------------------------- 344 (791)
T 3m0c_C 345 -------------------------------------------------------------------------------- 344 (791)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EcCCCCeEEEEeCCCCceEEEEeCCCccceeEEeeeCCeEEEeccCCCcceeeccccccccccceecccccccCCCccee
Q psy948 1258 ADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLFEDHIYWTDWNTKSINRADKFNAREIQAGILHHCMNITGGSGYLC 1337 (1576)
Q Consensus 1258 ~D~~~~~I~s~~~dG~~r~~v~~~~~~~~P~~lavfed~lYwtd~~~~~i~~~~k~~~~~~~~~~~~~c~n~~g~~~~~C 1337 (1576)
T Consensus 345 -------------------------------------------------------------------------------- 344 (791)
T 3m0c_C 345 -------------------------------------------------------------------------------- 344 (791)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eccCCceeccCCCccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceeccCCceEEEEecCCceeeecc
Q psy948 1338 TCYQGFIIDKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKANDNKLTIVYSNGPEIRAYET 1417 (1576)
Q Consensus 1338 ~C~~G~~~~~~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~~~~~~ll~s~~~~Ir~i~~ 1417 (1576)
.++.|.++|||. .++.|+|+|+|++|+|+|.|++||.|..+.+ +|+..++..+|++++...|+++.+
T Consensus 345 -----------~g~~C~dideC~-~~~~C~~~C~n~~gsy~C~C~~Gy~l~~~~~-~C~~~~~~p~Ll~an~~~Ir~i~l 411 (791)
T 3m0c_C 345 -----------AQRRCEDIDECQ-DPDTCSQLCVNLEGGYKCQCEEGFQLDPHTK-ACKAVGSIAYLFFTNRHEVRKMTL 411 (791)
T ss_dssp -----------TTTEEECCCCCS-SSSSCTTTCCBCSSCBCCCCCSSEECCSSCC-CCEETTSCCEEEEECBSSEEEECT
T ss_pred -----------CCCccccCcccC-CCCCCCCeeecCCCCceeecCCCCEeCCCCc-eeeecccccccccccccceeEeec
Confidence 023456788998 4689999999999999999999999975443 799988889999999999999999
Q ss_pred ccccccccccccccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEE
Q psy948 1418 HKRRFRDVISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYW 1497 (1576)
Q Consensus 1418 ~~~~~~~~v~~~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYW 1497 (1576)
....+..++....++++|+||+.+++|||+|...++|+|+.+++..... ....++...+..|.||||||++++|||
T Consensus 412 ~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~----~~~~vi~~~l~~P~GLAvD~~~~~LY~ 487 (791)
T 3m0c_C 412 DRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS----SYDTVISRDIQAPDGLAVDWIHSNIYW 487 (791)
T ss_dssp TSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC------------CEEEECSSCSCCCEEEEETTTTEEEE
T ss_pred cCCcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCc----ceeEEEecCCCCcceeeeeecCCcEEE
Confidence 8887777888888999999999999999999999999999988743210 001122236789999999999999999
Q ss_pred eecCCCCCCCCCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEecCCCCcEEEeecCCCCcEEEEecCCCCC
Q psy948 1498 TVSDRSGSKPKGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAETGASPRIESAWMDGSHRSATQISNRQAP 1576 (1576)
Q Consensus 1498 TD~~~~~~~~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~mDGs~r~~i~~~~~~~P 1576 (1576)
+|.. .++|+|++++|+.+++|+...+..|++|||||..|+|||||||..++|+|++|||+.|++|+...|.+|
T Consensus 488 tD~~------~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P 560 (791)
T 3m0c_C 488 TDSV------LGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWP 560 (791)
T ss_dssp EETT------TTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCE
T ss_pred EecC------CCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCc
Confidence 9986 689999999999999999999999999999999999999999987899999999999999999999987
No 4
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=100.00 E-value=2e-77 Score=783.05 Aligned_cols=528 Identities=35% Similarity=0.738 Sum_probs=398.3
Q ss_pred CccccCCCCeEeccccccCCcCCCCCCCCcchhccccccCCCCCCcccccC--CceecccccCCCCCCCCCCCCCcccCc
Q psy948 710 TTDFQCKNNRCIPKRWMCDFENDCGDQSDEAEDLCAGAYRQCSESEFQCKN--GKCIPAQWRCDHDEDCTDGSDEMECGG 787 (1576)
Q Consensus 710 ~~~f~C~~~~Ci~~~~~Cdg~~dC~d~sDE~~~~c~~~~~~C~~~~f~C~~--g~CI~~~~~CDg~~DC~dgsDE~~C~~ 787 (1576)
+.+|+|.+++|||..|+|||..||+|+|||....|.. .+|++.+|+|.+ ++|||..|+|||..||.|||||.+|..
T Consensus 8 ~~~f~C~~g~ci~~~~~Cdg~~dC~d~sDE~~~~C~~--~~C~~~~f~C~~~~~~Ci~~~~~Cdg~~dC~dgsDE~~C~~ 85 (699)
T 1n7d_A 8 RNEFQCQDGKCISYKWVCDGSAECQDGSDESQETCLS--VTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGCPP 85 (699)
T ss_dssp ------------------------------------C--CSCSSSSCCCCC--CCCCCSSSTTSSSCCC-CCCTTTSCSS
T ss_pred ccceeCCCCcEEcHHhcCCCcccCCCCCCCCccccCC--cCCCCCccCCCCCCCceeCcceecCCcccCCCCcccCcccc
Confidence 5899999999999999999999999999998766743 579999999987 489999999999999999999999986
Q ss_pred ceeeccCcceeeeeeeecccccCCcccccCCCCCCCCCCCcccCCccCCCCccccCCCcccCceeecCCCCCCCCCccCC
Q psy948 788 FQCKCVTMTRIVQMEVMKWNAAASNWRCDHDEDCTDGSDETECGGFQCKNGTFQCSSGHCIAAYFRCDGDRDCRDLSELN 867 (1576)
Q Consensus 788 ~~c~~~~~~~~~~~~~~~~~c~~~~~~Cdg~~dC~dgsDE~~C~~~~C~~~~f~C~~g~Ci~~~~~Cdg~~dC~d~sde~ 867 (1576)
..|... ++.+.+++||+.+|+|||..||.|||||.+|....|++.+|+|.
T Consensus 86 ~~C~~~------~f~C~~g~Ci~~~~~Cdg~~dC~dgsDE~~C~~~~C~~~~f~C~------------------------ 135 (699)
T 1n7d_A 86 KTCSQD------EFRCHDGKCISRQFVCDSDRDCLDGSDEASCPVLTCGPASFQCN------------------------ 135 (699)
T ss_dssp CCCCSS------CCCSSCC----CCCTTCSSCCSSSSCSSSSCCCCCCCSSCCCCS------------------------
T ss_pred cccccC------cEEcCCCCEecHHHcCCCcCcCCCCCccCCcCccccCccccCCC------------------------
Confidence 666432 34555678889999999999999999998887777777666555
Q ss_pred CeeecCCCceecceeeeCCCCCCCCCCCC--CCCCCCCC---CCCCCCCCcccccCCCceeccCccccCCCCCCCCCCCC
Q psy948 868 GTFQCSSGHCIAAYFRCDGDRDCRDLSDE--MNCPPRYP---GGRFCPEYKFQCASTHLCVEQSELCDGTDDCGDNSDET 942 (1576)
Q Consensus 868 ~~f~C~~g~Ci~~~~~Cdg~~dC~d~sDE--~~C~~~~~---~~~~C~~~~f~C~~~~~Ci~~~~~Cdg~~DC~DgsDE~ 942 (1576)
+|+||+..|+|||..||.|+||| .+|+.... ....|++.+|+|.++ .||+.+|+|||..||.|||||.
T Consensus 136 ------~~~Ci~~~~~Cdg~~dC~dgsDE~~~~C~~~~~~~~~~~~C~~~~f~C~~g-~Ci~~~~~CDg~~dC~dgsDE~ 208 (699)
T 1n7d_A 136 ------SSTCIPQLWACDNDPDCEDGSDEWPQRCRGLYVFQGDSSPCSAFEFHCLSG-ECIHSSWRCDGGPDCKDKSDEE 208 (699)
T ss_dssp ------SSCCCCTTSTTCSSCCSSSSSSSSCSSSSCCCCCSSCCCCSCSSSCCCSSS-CCCSTTCTTSSSCCSTTSCSSC
T ss_pred ------CCcccchhcccCCCCcCCCCcccccccCCCcccccCCCCCCCCcceecCCC-ceEechhccCCCCCCCCCcccc
Confidence 45566666777777777778888 77853211 124799999999987 8999999999999999999998
Q ss_pred cCcCCCCccCCCCeeecCCCceecCceecCCCcCCCCCCCCCCcccccccccccCCCCCCceeeCCCceeccCcccCCcC
Q psy948 943 SSLCSNMNCTSLHKYQCDNGRCIASYQLCDGVDNCGDGSDENNLTLCTVHTRVKPCELYSQYTCSNHKCIDRAALCNHVD 1022 (1576)
Q Consensus 943 ~~~C~~~~C~~~~~f~C~ng~Ci~~~~~CdG~~dC~DgsDE~~~~~c~~~~~~~~C~~~~~f~C~~g~Ci~~~~~Cd~~~ 1022 (1576)
. |....|. +.+|+|.++.||+.+++|||+.||.|||||.+|.. ...|....+|+|.++.||+..++|++..
T Consensus 209 ~--C~~~~C~-~~~f~C~~g~Ci~~~~~Cdg~~dC~dgsde~~C~~------~~~C~~~~~~~C~~g~Ci~~~~~Cd~~~ 279 (699)
T 1n7d_A 209 N--CAVATCR-PDEFQCSDGNCIHGSRQCDREYDCKDMSDEVGCVN------VTLCEGPNKFKCHSGECITLDKVCNMAR 279 (699)
T ss_dssp S--CCCCCCC-SSEEESSSSCEEETTCCSSSCCCSSSSCSSSSTTC------CCCCCSTTCCCCTTSCCCCSSCCSCSSC
T ss_pred c--CCCcccC-CCcEecCCCceeeeecccCCCCCCCCCCccCCCCC------CCcccCCCceecCCCcEeCCcccccccc
Confidence 5 7666785 57999999999999999999999999999987531 2235434678888888888888888888
Q ss_pred CCCCCCcccCCCCCCCCCCCCCeeecCCceeccccccCCCCCCCCCCCCCCcccCccccccCCCcccccceeCCCeeeee
Q psy948 1023 DCGDLSDELGCHKENSTCSSSQFRCNNGKCIDYHLVCNKESDCEDDSDEPLHCNVDECAKVETNQCGHKCVDTLTGYYCE 1102 (1576)
Q Consensus 1023 dC~dgsDE~~C~~~~~~C~~~~~~C~nG~Ci~~~~~C~~~~~C~D~sDe~~~cdidEC~~~~~~~Csq~C~Nt~Gsy~C~ 1102 (1576)
+|.+++||... .|++|||+. +++.|+|.|+|++|+|+|.
T Consensus 280 dC~dgsDe~~~----------------------------------------~C~~~eC~~-~~~~C~~~C~~~~~~~~C~ 318 (699)
T 1n7d_A 280 DCRDWSDEPIK----------------------------------------ECGTNECLD-NNGGCSHVCNDLKIGYECL 318 (699)
T ss_dssp CSSSSCSCCCS----------------------------------------SCCCCCTTS-STTTSCTTCCCCTTCCCCC
T ss_pred eecCccccccc----------------------------------------ccccccccc-cccCcCCCcccCCCCcEEe
Confidence 88877776321 245899986 5788999999999999999
Q ss_pred cCCCcccCCCCcccCCCCceeecceeEEeeEeeccceEEEEeeeeccCceeecceEEEEeeecceeEEecCCCeEEEEec
Q psy948 1103 CNTGYNDDDIGTVSPSSNKVLTRSTVIYHVRIWSSNVLVMADVYSTRGSVMENRTVKMEVTKIPLCALDVRSIKLDVAEL 1182 (1576)
Q Consensus 1103 C~~Gy~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~avD~~~~~I~v~~l 1182 (1576)
|++||+|.
T Consensus 319 C~~G~~~~------------------------------------------------------------------------ 326 (699)
T 1n7d_A 319 CPDGFQLV------------------------------------------------------------------------ 326 (699)
T ss_dssp CCSSSCCC------------------------------------------------------------------------
T ss_pred CCCCeEcC------------------------------------------------------------------------
Confidence 99999631
Q ss_pred cCCceEecccccCCcceEEEeCCcceEEEecCCCcCeEEEEecCCCCcEEEEeccCCCCCcceEEEeccCCeEEEEcCCC
Q psy948 1183 DGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHL 1262 (1576)
Q Consensus 1183 dG~~r~~l~~~l~~P~~iavdP~~g~lywtd~g~~~~I~ra~mdGs~~~~iv~~~~~l~~P~gLaiD~~~~rlYw~D~~~ 1262 (1576)
T Consensus 327 -------------------------------------------------------------------------------- 326 (699)
T 1n7d_A 327 -------------------------------------------------------------------------------- 326 (699)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CeEEEEeCCCCceEEEEeCCCccceeEEeeeCCeEEEeccCCCcceeeccccccccccceecccccccCCCcceeeccCC
Q psy948 1263 DYIASVDLDGKHKHIVISGQKVPHVFALTLFEDHIYWTDWNTKSINRADKFNAREIQAGILHHCMNITGGSGYLCTCYQG 1342 (1576)
Q Consensus 1263 ~~I~s~~~dG~~r~~v~~~~~~~~P~~lavfed~lYwtd~~~~~i~~~~k~~~~~~~~~~~~~c~n~~g~~~~~C~C~~G 1342 (1576)
T Consensus 327 -------------------------------------------------------------------------------- 326 (699)
T 1n7d_A 327 -------------------------------------------------------------------------------- 326 (699)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeccCCCccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceeccCCceEEEEecCCceeeeccccccc
Q psy948 1343 FIIDKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKANDNKLTIVYSNGPEIRAYETHKRRF 1422 (1576)
Q Consensus 1343 ~~~~~~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~~~~~~ll~s~~~~Ir~i~~~~~~~ 1422 (1576)
.++.|.++|||+. +++|+|+|+|++|+|+|.|++||+|..+.+ +|+......+|++++...|+++.+.+..+
T Consensus 327 ------~~~~C~dideC~~-~~~C~~~C~n~~g~y~C~C~~G~~~~~~~~-~C~~~~~~~~ll~~~~~~I~~id~~~~~~ 398 (699)
T 1n7d_A 327 ------AQRRCEDIDECQD-PDTCSQLCVNLEGGYKCQCEEGFQLDPHTK-ACKAVGSIAYLFFTNRHEVRKMTLDRSEY 398 (699)
T ss_dssp ------SSSCCCCCCCCSS-SSSCTTTCCBCSSCBCCCCCSSCBCCSSCC-CCBCCSSCCCBCCCCTTC-CEECTTSCCE
T ss_pred ------CCCcccCccccCC-CCccccccccCCCCeeeeeecccccCCCCC-cccccccceeEEecCccceEEEeCCCCcc
Confidence 0234667889974 578999999999999999999999975544 79988888899999999999999988777
Q ss_pred cccccccccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCC
Q psy948 1423 RDVISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDR 1502 (1576)
Q Consensus 1423 ~~~v~~~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~ 1502 (1576)
..++....++++|+||+.+++|||+|...++|+++.+++...+.. ...++..++..|.||||||++++|||+|..
T Consensus 399 ~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~----~~~~i~~~~~~P~glavD~~~g~LY~tD~~- 473 (699)
T 1n7d_A 399 TSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSS----YDTVISRDIQAPDGLAVDWIHSNIYWTDSV- 473 (699)
T ss_dssp ECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CC----CCCBCCSCC--CCCEECCCSSSBCEECCTT-
T ss_pred eeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcc----eEEEEeCCCCCcceEEEEeeCCcEEEEecc-
Confidence 777777889999999999999999999999999998876211100 011122346789999999999999999975
Q ss_pred CCCCCCCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEecCCCCcEEEeecCCCCcEEEEecCCCCC
Q psy948 1503 SGSKPKGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAETGASPRIESAWMDGSHRSATQISNRQAP 1576 (1576)
Q Consensus 1503 ~~~~~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~mDGs~r~~i~~~~~~~P 1576 (1576)
.++|.|++++|+.+++|+..++..|++|||||..|+||||||+..++|+|++|||+.+++|+...|.+|
T Consensus 474 -----~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~P 542 (699)
T 1n7d_A 474 -----LGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWP 542 (699)
T ss_dssp -----TSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSC
T ss_pred -----CCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCc
Confidence 578999999999999999888999999999999999999999977899999999999999988888887
No 5
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=100.00 E-value=1.9e-57 Score=585.70 Aligned_cols=385 Identities=27% Similarity=0.514 Sum_probs=325.6
Q ss_pred eeecceeEEecCCCeEEEEeccCCceEecc-cccCCcceEEEeCCcceEEEecCCCcCeEEEEecCCCCcEEEEeccCCC
Q psy948 1162 VTKIPLCALDVRSIKLDVAELDGTNRKTLK-TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDI 1240 (1576)
Q Consensus 1162 ~~~~~~~avD~~~~~I~v~~ldG~~r~~l~-~~l~~P~~iavdP~~g~lywtd~g~~~~I~ra~mdGs~~~~iv~~~~~l 1240 (1576)
+....+||+|....+|++++++|+.+++|. ..+.+|++|||||..|+|||+||+..++|+|+.|||+.+++++. .+
T Consensus 89 ~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~---~~ 165 (628)
T 4a0p_A 89 WLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVP---NV 165 (628)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC---SC
T ss_pred eCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEEC---CC
Confidence 344567888888899999999999998886 78999999999999999999999989999999999999988874 79
Q ss_pred CCcceEEEeccCCeEEEEcCCCCeEEEEeCCCCceEEEEeCCCccceeEEeeeCCeEEEeccCCCcceeecccccccccc
Q psy948 1241 AWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLFEDHIYWTDWNTKSINRADKFNAREIQA 1320 (1576)
Q Consensus 1241 ~~P~gLaiD~~~~rlYw~D~~~~~I~s~~~dG~~r~~v~~~~~~~~P~~lavfed~lYwtd~~~~~i~~~~k~~~~~~~~ 1320 (1576)
.||+|||||+.+++|||+|++.++|++++++|+.++++.. .+.+||+|++++++|||+||.+++|.+++|++++....
T Consensus 166 ~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~--~l~~P~glav~~~~ly~tD~~~~~I~~~dk~tg~~~~~ 243 (628)
T 4a0p_A 166 GRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIAD--DLPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQNRTI 243 (628)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEE--CCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEE
T ss_pred CCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEeec--cCCCceEEEEECCEEEEecCCCCEEEEEECCCCCceEE
Confidence 9999999999999999999999999999999999976654 48899999999999999999999999999999877543
Q ss_pred ceecccccccCCCcceeeccCCceeccCCCccccCCCCccCCCCccccccccCC-CceEEEcCCCcEecCCCCCceeccC
Q psy948 1321 GILHHCMNITGGSGYLCTCYQGFIIDKNNAKKCLDVDECATGIHHCSQVCTNLN-GTYACSCNAGFTLSDGLSGVCKAND 1399 (1576)
Q Consensus 1321 ~~~~~c~n~~g~~~~~C~C~~G~~~~~~~~~~c~d~neC~~~~~~Cs~lC~n~~-gsy~C~Cp~G~~l~d~~~~~C~~~~ 1399 (1576)
... ++.. |.+..+.... . -..+|||+.+|++|+|+|++++ ++|+|.||.||.|..+.+ +|...
T Consensus 244 l~~----~~~~--------p~~i~v~~~~-~-q~~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~-~C~~~- 307 (628)
T 4a0p_A 244 IQG----HLDY--------VMDILVFHSS-R-QSGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNR-TCSAP- 307 (628)
T ss_dssp EEC----SCCS--------CCEEEEECGG-G-SCCCCTTTTTGGGCSSEEEEETTTEEEEECSTTCEECTTSS-CEECC-
T ss_pred Eec----CCCC--------cceeeeeeec-c-cccceEeccCCCCcchhhhcCCCCCeeEEcCCCcEecccCC-cCccc-
Confidence 211 1111 3344443321 2 2378999999999999999999 999999999999985544 79864
Q ss_pred CceEEEEecCCceeeeccccccc---cccccccccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceee
Q psy948 1400 NKLTIVYSNGPEIRAYETHKRRF---RDVISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLG 1476 (1576)
Q Consensus 1400 ~~~~ll~s~~~~Ir~i~~~~~~~---~~~v~~~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~ 1476 (1576)
..+|+++.+..|+++.++.... ...+....++.+||||+++++|||+|...++|+|+.++|+...+++.... ..
T Consensus 308 -~~~Ll~s~~~~i~~i~l~~~~~~~~~l~~~~~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~--~~ 384 (628)
T 4a0p_A 308 -TTFLLFSQKSAINRMVIDEQQSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSV--PS 384 (628)
T ss_dssp -SSEEEEEETTEEEEECCCTTCCCCEECCCTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-------
T ss_pred -cceeeeeccceEEEEecccccCceEEEEehhcCCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEccc--cc
Confidence 4588999999999998765432 23345678899999999999999999999999999988876544432100 00
Q ss_pred eeccCCcceeeecCCCCeEEEeecCCCCCCCCCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEecCCCC-cE
Q psy948 1477 IKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPKGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAETGASP-RI 1555 (1576)
Q Consensus 1477 ~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~~~-~I 1555 (1576)
...+..|.||||||+++||||||+. .++|+|++++|+.+++|+..++.+|++|||||.+|+|||||||.++ +|
T Consensus 385 ~~~~~~p~glAvD~~~~nLY~td~~------~~~I~v~~~~G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I 458 (628)
T 4a0p_A 385 QNLEIQPYDLSIDIYSRYIYWTCEA------TNVINVTRLDGRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKI 458 (628)
T ss_dssp ---CCCEEEEEEETTTTEEEEEETT------TTEEEEEETTSCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEE
T ss_pred ccccCCcceEEeeccCCeEEEEcCC------CCEEEEEECCCCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeE
Confidence 1246789999999999999999986 6899999999999999999999999999999999999999999875 99
Q ss_pred EEeecCCCCcEEEEecCCCCC
Q psy948 1556 ESAWMDGSHRSATQISNRQAP 1576 (1576)
Q Consensus 1556 era~mDGs~r~~i~~~~~~~P 1576 (1576)
+|++|||++|++|+.++|.||
T Consensus 459 ~r~~~dG~~~~~l~~~~l~~P 479 (628)
T 4a0p_A 459 ERAALDGTEREVLFFSGLSKP 479 (628)
T ss_dssp EEEETTSCSCEEEECSSCSCE
T ss_pred EEEeCCCCCcEEEEeccCCCc
Confidence 999999999999999999988
No 6
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=100.00 E-value=3.4e-56 Score=573.62 Aligned_cols=381 Identities=35% Similarity=0.665 Sum_probs=322.1
Q ss_pred ecceeEEecCCCeEEEEeccCCceEecc-cccCCcceEEEeCCcceEEEecCCCcCeEEEEecCCCCcEEEEeccCCCCC
Q psy948 1164 KIPLCALDVRSIKLDVAELDGTNRKTLK-TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAW 1242 (1576)
Q Consensus 1164 ~~~~~avD~~~~~I~v~~ldG~~r~~l~-~~l~~P~~iavdP~~g~lywtd~g~~~~I~ra~mdGs~~~~iv~~~~~l~~ 1242 (1576)
...+||+|...++|.+++++|+.+++|. ..+..|++|||||..|+||||||+..++|+|+.|||+.+++++. ..+.|
T Consensus 95 ~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~--~~~~~ 172 (619)
T 3s94_A 95 GEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIIN--SEIYW 172 (619)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC--SSCSS
T ss_pred CCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEe--CCCCC
Confidence 3457888888899999999999998886 78999999999999999999999988999999999999988875 46999
Q ss_pred cceEEEeccCCeEEEEcCCCCeEEEEeCCCCceEEEEeCCCccceeEEeeeCCeEEEeccCCCcceeeccccccccccce
Q psy948 1243 PNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLFEDHIYWTDWNTKSINRADKFNAREIQAGI 1322 (1576)
Q Consensus 1243 P~gLaiD~~~~rlYw~D~~~~~I~s~~~dG~~r~~v~~~~~~~~P~~lavfed~lYwtd~~~~~i~~~~k~~~~~~~~~~ 1322 (1576)
|+|||||+.+++|||+|.+.++|++++++|+.+++++.+ .+.|||+|++|+++|||+||.+.+|.+++|++++......
T Consensus 173 P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~-~~~~P~gi~~~~~~ly~td~~~~~V~~~d~~tg~~~~~i~ 251 (619)
T 3s94_A 173 PNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKG-SLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIH 251 (619)
T ss_dssp EEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC----------CCCEEESSSEEEEECTTTCSEEEEESSSCCCCEECC
T ss_pred CcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeC-CCCCceEEEEeCCEEEEecCCCCEEEEEECCCCcccEEEe
Confidence 999999999999999999999999999999999888753 5899999999999999999999999999999987654321
Q ss_pred ecccccccCCCcceeeccCCceeccCCCccccCCCCccCCCCccccccccCC--CceEEEcCCCcEecCCCCCceeccCC
Q psy948 1323 LHHCMNITGGSGYLCTCYQGFIIDKNNAKKCLDVDECATGIHHCSQVCTNLN--GTYACSCNAGFTLSDGLSGVCKANDN 1400 (1576)
Q Consensus 1323 ~~~c~n~~g~~~~~C~C~~G~~~~~~~~~~c~d~neC~~~~~~Cs~lC~n~~--gsy~C~Cp~G~~l~d~~~~~C~~~~~ 1400 (1576)
. ++.. |.+..+... ..+....|+|..+|++|+|+|++++ ++|+|.||.||.|.++.+ +|... +
T Consensus 252 ~----~~~~--------p~~i~v~~~-~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~-~C~~~-~ 316 (619)
T 3s94_A 252 S----DIFS--------PMDIHAFSQ-QRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGK-TCKDG-A 316 (619)
T ss_dssp S----CCCC--------CSEEEECCG-GGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSS-CBCSS-C
T ss_pred c----CCCC--------CcEEEEEcc-ccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCc-ccCCC-C
Confidence 1 1111 334444322 2344568999999999999999887 479999999999986543 79864 3
Q ss_pred ceEEEEecCCceeeecccccccccc---ccccccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeee
Q psy948 1401 KLTIVYSNGPEIRAYETHKRRFRDV---ISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGI 1477 (1576)
Q Consensus 1401 ~~~ll~s~~~~Ir~i~~~~~~~~~~---v~~~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~ 1477 (1576)
..+|+++.+..|+++.++......+ +..+.++.+||||+.+++|||+|...++|+|+.++++...+++ .
T Consensus 317 ~~~Ll~~~~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~--------~ 388 (619)
T 3s94_A 317 TELLLLARRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVV--------T 388 (619)
T ss_dssp SEEEEEEESSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE--------C
T ss_pred ceEEEEEcccceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEE--------E
Confidence 6788999999999999887654433 3456789999999999999999999999999999876543332 2
Q ss_pred eccCCcceeeecCCCCeEEEeecCCCCCCCCCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEecCCCCcEEE
Q psy948 1478 KSIGKLTAIAVDWIAHNIYWTVSDRSGSKPKGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAETGASPRIES 1557 (1576)
Q Consensus 1478 ~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~~~~Ier 1557 (1576)
.++..|.||||||+++||||||++ .++|+|++++|+.+++|+..++.+|++|||||.+|+|||||||..++|+|
T Consensus 389 ~~~~~p~GlAvD~~~~~lY~tD~~------~~~I~v~~~~G~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r 462 (619)
T 3s94_A 389 AQIAHPDGIAVDWVARNLYWTDTG------TDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIER 462 (619)
T ss_dssp SSCSCCCEEEEETTTTEEEEEETT------TTEEEEEETTSCSCEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEE
T ss_pred CCCCCcCceEEecccCcEEEEeCC------CCcEEEEeCCCCeEEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEE
Confidence 456799999999999999999986 68999999999999999999999999999999999999999998899999
Q ss_pred eecCCCCcEEEEecCCCCC
Q psy948 1558 AWMDGSHRSATQISNRQAP 1576 (1576)
Q Consensus 1558 a~mDGs~r~~i~~~~~~~P 1576 (1576)
++|||+++++|+.+.|.||
T Consensus 463 ~~~dG~~~~~l~~~~l~~P 481 (619)
T 3s94_A 463 AALDGSDRVVLVNTSLGWP 481 (619)
T ss_dssp EETTSCSCEEEECSSCSCE
T ss_pred EccCCCccEEEEeCCCCCC
Confidence 9999999999999999988
No 7
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=100.00 E-value=1.4e-37 Score=381.36 Aligned_cols=304 Identities=25% Similarity=0.554 Sum_probs=231.8
Q ss_pred cCccccccCCCcccccceeCCCeeeeecCCCcccCCCCcccCC----CCceeecceeEEee-------------------
Q psy948 1076 NVDECAKVETNQCGHKCVDTLTGYYCECNTGYNDDDIGTVSPS----SNKVLTRSTVIYHV------------------- 1132 (1576)
Q Consensus 1076 didEC~~~~~~~Csq~C~Nt~Gsy~C~C~~Gy~l~~~~~~~~~----~~~~~~~~~~~~~~------------------- 1132 (1576)
|||||+. +++|+|.|+|++|+|+|.|.+||.+...+..+.. ...+++....|+.+
T Consensus 39 dideC~~--~~~C~~~C~n~~g~~~C~C~~g~~~~~~~~~C~~~~~~~~ll~~~~~~I~~i~l~~~~~~~~~~~~~~~~~ 116 (400)
T 3p5b_L 39 DIDECQD--PDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVA 116 (400)
T ss_dssp ECCCCST--TSSCSSCCBCCSSSCBCCCCTTCCCCTTTSSCCCSTTSCEEEEEETTEEEEECTTSCSCEEEECSCSCEEE
T ss_pred Cchhhhc--cCCCCCccCCCccceeeeccccccccccccceeeccccceeEEeccceeEEEccCCcceeEeccccCcceE
Confidence 6999984 6899999999999999999999999876654432 11223322222211
Q ss_pred -Eee-ccceEEEEeeeec-------cCc--------eee---c--ceEEEEeeecceeEEecCCCeEEEEeccCCceEec
Q psy948 1133 -RIW-SSNVLVMADVYST-------RGS--------VME---N--RTVKMEVTKIPLCALDVRSIKLDVAELDGTNRKTL 1190 (1576)
Q Consensus 1133 -~~~-~~~~~~~~d~~~~-------~~~--------~~~---~--~~~~~~~~~~~~~avD~~~~~I~v~~ldG~~r~~l 1190 (1576)
.+. ..+.+||+|+... .+. +.. . ..+.+++....+||+|+...+|.+++++|..+++|
T Consensus 117 l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l 196 (400)
T 3p5b_L 117 LDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTL 196 (400)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEE
T ss_pred EeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEE
Confidence 122 3568889886321 110 000 0 01122222446888888899999999999999888
Q ss_pred c-cccCCcceEEEeCCcceEEEecCCCcCeEEEEecCCCCcEEEEeccCCCCCcceEEEeccCCeEEEEcCCCCeEEEEe
Q psy948 1191 K-TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVD 1269 (1576)
Q Consensus 1191 ~-~~l~~P~~iavdP~~g~lywtd~g~~~~I~ra~mdGs~~~~iv~~~~~l~~P~gLaiD~~~~rlYw~D~~~~~I~s~~ 1269 (1576)
. ..+..|++|||||..|+|||+||+..++|+|+.|||+.+++++. ..+.||+|||||+.+++|||+|+..++|++++
T Consensus 197 ~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~--~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d 274 (400)
T 3p5b_L 197 FRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT--ENIQWPNGITLDLLSGRLYWVDSKLHSISSID 274 (400)
T ss_dssp EECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEEC--SSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEE--CCCCceEEEEEEeCCCEEEEEECCCCEEEEEe
Confidence 6 57899999999999999999999988999999999999988875 57899999999999999999999999999999
Q ss_pred CCCCceEEEEeC-CCccceeEEeeeCCeEEEeccCCCcceeeccccccccccceecccccccCCCcceeeccCCceeccC
Q psy948 1270 LDGKHKHIVISG-QKVPHVFALTLFEDHIYWTDWNTKSINRADKFNAREIQAGILHHCMNITGGSGYLCTCYQGFIIDKN 1348 (1576)
Q Consensus 1270 ~dG~~r~~v~~~-~~~~~P~~lavfed~lYwtd~~~~~i~~~~k~~~~~~~~~~~~~c~n~~g~~~~~C~C~~G~~~~~~ 1348 (1576)
++|+.+++++.. ..+.+|++|++++++|||+||.+++|.+++|.+|+.+..... ++.. |.+..+...
T Consensus 275 ~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G~~~~~i~~----~~~~--------p~~i~v~~~ 342 (400)
T 3p5b_L 275 VNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAE----NLLS--------PEDMVLFHN 342 (400)
T ss_dssp TTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESSSCSEEEEESSSCCCCEEEEC----SCSC--------EEEEEEESG
T ss_pred CCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEEcCCCCceEEEec----CCCC--------CceEEEEee
Confidence 999999988864 468999999999999999999999999999999877653221 1111 233333322
Q ss_pred CCccccCCCCcc---CCCCccccccccCCC------ceEEEcCCCcEecCCCCCceec
Q psy948 1349 NAKKCLDVDECA---TGIHHCSQVCTNLNG------TYACSCNAGFTLSDGLSGVCKA 1397 (1576)
Q Consensus 1349 ~~~~c~d~neC~---~~~~~Cs~lC~n~~g------sy~C~Cp~G~~l~d~~~~~C~~ 1397 (1576)
..+....|+|. .+|++|+|+|++.++ +|+|+||.||.|..+.+ +|..
T Consensus 343 -~~qp~~~n~c~~~~~~ng~C~~lC~~~~~~~~~~~~~~C~C~~g~~l~~d~~-~C~~ 398 (400)
T 3p5b_L 343 -LTQPRGVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMR-SCLT 398 (400)
T ss_dssp -GGSCCCCCSSSSSSSGGGGCSSEEEECCCSSTTCCSEEEECCTTCEECTTSS-SEES
T ss_pred -ccCCCCCCccccccCCCcCcCCeecCCCcccCCCCCeeEECCCCCEECCCCC-ccCC
Confidence 23445678995 468999999998764 79999999999985543 6864
No 8
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=100.00 E-value=3e-37 Score=371.82 Aligned_cols=301 Identities=31% Similarity=0.586 Sum_probs=221.9
Q ss_pred CccccccCCCcccccceeCCCeeeeecCCCcccCCCCcccCC----CCceeecceeEEe--------------------e
Q psy948 1077 VDECAKVETNQCGHKCVDTLTGYYCECNTGYNDDDIGTVSPS----SNKVLTRSTVIYH--------------------V 1132 (1576)
Q Consensus 1077 idEC~~~~~~~Csq~C~Nt~Gsy~C~C~~Gy~l~~~~~~~~~----~~~~~~~~~~~~~--------------------~ 1132 (1576)
||||+ +++.|+|+|+|++|||+|+|++||.|.+++..+.. ...+++....|+. +
T Consensus 1 i~ec~--~~~~C~~~C~n~~g~~~C~C~~g~~l~~d~~~C~~~~~~~~ll~~~~~~I~~i~~~g~~~~~~~~~~~~~~~l 78 (349)
T 3v64_C 1 VNECA--EEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIAL 78 (349)
T ss_dssp ----------CCSSEECCC---CCEECCTTEEECTTSSCEEESSSCCEEEEECBSCEEEECTTSCCEEEEECSCSCEEEE
T ss_pred CcccC--CCCCCcCeeecCCCCeEEECCCCccCCCCCCcccccccCceeEeecccceEEEeCCCCeeEEeecCCCceEEE
Confidence 68998 47999999999999999999999999876654421 1122332222221 1
Q ss_pred Eee-ccceEEEEeeeecc-------Ccee---------ecceEEEEeeecceeEEecCCCeEEEEeccCCceEecc-ccc
Q psy948 1133 RIW-SSNVLVMADVYSTR-------GSVM---------ENRTVKMEVTKIPLCALDVRSIKLDVAELDGTNRKTLK-TAI 1194 (1576)
Q Consensus 1133 ~~~-~~~~~~~~d~~~~~-------~~~~---------~~~~~~~~~~~~~~~avD~~~~~I~v~~ldG~~r~~l~-~~l 1194 (1576)
.+. ..+.+||+|+...+ +... ....+.++.....+||+|....+|.+++++|..++++. ..+
T Consensus 79 ~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l 158 (349)
T 3v64_C 79 DFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSL 158 (349)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTC
T ss_pred EEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCC
Confidence 112 35688888853221 1100 00112222234457888888899999999999988875 678
Q ss_pred CCcceEEEeCCcceEEEecCCCcCeEEEEecCCCCcEEEEeccCCCCCcceEEEeccCCeEEEEcCCCCeEEEEeCCCCc
Q psy948 1195 QDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKH 1274 (1576)
Q Consensus 1195 ~~P~~iavdP~~g~lywtd~g~~~~I~ra~mdGs~~~~iv~~~~~l~~P~gLaiD~~~~rlYw~D~~~~~I~s~~~dG~~ 1274 (1576)
..|++|||||..|+|||+||+..++|+|+.|||+.+++++. ..+.+|+|||||+.+++|||+|...++|++++++|+.
T Consensus 159 ~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~--~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~ 236 (349)
T 3v64_C 159 EKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD--THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSH 236 (349)
T ss_dssp SCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCC--SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEE--CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCc
Confidence 99999999999999999999988999999999999877654 5799999999999999999999999999999999999
Q ss_pred eEEEEeCCCccceeEEeeeCCeEEEeccCCCcceeeccccccccccceecccccccCCCcceeeccCCceeccCCCcccc
Q psy948 1275 KHIVISGQKVPHVFALTLFEDHIYWTDWNTKSINRADKFNAREIQAGILHHCMNITGGSGYLCTCYQGFIIDKNNAKKCL 1354 (1576)
Q Consensus 1275 r~~v~~~~~~~~P~~lavfed~lYwtd~~~~~i~~~~k~~~~~~~~~~~~~c~n~~g~~~~~C~C~~G~~~~~~~~~~c~ 1354 (1576)
+++++.. .+.+|++|++++++|||+||.+++|.+++|++|+....... .+.. |.|..+... ..+..
T Consensus 237 ~~~~~~~-~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~----~~~~--------p~gi~v~~~-~~qp~ 302 (349)
T 3v64_C 237 RKAVISQ-GLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRN----KLHF--------PMDIHTLHP-QRQPA 302 (349)
T ss_dssp CEEEECS-SCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEEC----SCSC--------CCCEEEECG-GGSCC
T ss_pred eEEEEeC-CCCCceEEEEECCEEEEecCCCCeEEEEEccCCCccEEecc----CCCC--------CceEEEEcc-ccCcc
Confidence 9887753 48899999999999999999999999999998876653221 1111 445554432 23345
Q ss_pred CCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceec
Q psy948 1355 DVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKA 1397 (1576)
Q Consensus 1355 d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~ 1397 (1576)
..|+|..+|++|+|||+..+++|+|+||.||+..+++ +|..
T Consensus 303 ~~n~C~~~~g~C~~lCl~~~~~~~C~C~~g~~~~d~~--~C~~ 343 (349)
T 3v64_C 303 GKNRCGDNNGGCTHLCLPSGQNYTCACPTGFRKINSH--ACAL 343 (349)
T ss_dssp CCCTTTTGGGGCSSEEECCTTSCEEECCTTEEEETTT--EEEE
T ss_pred ccCcccCCCCCcccEeecCCCCCeeECCCCCcCCCCC--cccc
Confidence 6899999999999999999999999999999933443 7864
No 9
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=100.00 E-value=1.7e-36 Score=370.44 Aligned_cols=302 Identities=31% Similarity=0.586 Sum_probs=218.4
Q ss_pred ccCccccccCCCcccccceeCCCeeeeecCCCcccCCCCcccCC----CCceeecceeEEe-------------------
Q psy948 1075 CNVDECAKVETNQCGHKCVDTLTGYYCECNTGYNDDDIGTVSPS----SNKVLTRSTVIYH------------------- 1131 (1576)
Q Consensus 1075 cdidEC~~~~~~~Csq~C~Nt~Gsy~C~C~~Gy~l~~~~~~~~~----~~~~~~~~~~~~~------------------- 1131 (1576)
-|||||+ .+++|+|.|+|++|+|+|.|++||.|.+++..+.. ...+++....|+.
T Consensus 42 ~d~~eC~--~~~~C~~~C~~~~g~~~C~C~~g~~l~~d~~~C~~~~~~~~l~~~~~~~I~~i~~~~~~~~~~~~~~~~~~ 119 (386)
T 3v65_B 42 QDVNECA--EEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAI 119 (386)
T ss_dssp ------------CCTTEEC-----CCEECCTTEEECTTSSCEEECSSCCEEEEECBSCEEEECTTSCCCEEEECSCSCEE
T ss_pred CccceeC--CcCcccCcCCCCCCCCeEEECCCceEcCCCCeECCccccceeEeecCccceeeccCCCcEEEEecCCCccE
Confidence 3699998 36899999999999999999999999876554321 1122222222221
Q ss_pred -eEee-ccceEEEEeeeecc-------Cceee---------cceEEEEeeecceeEEecCCCeEEEEeccCCceEecc-c
Q psy948 1132 -VRIW-SSNVLVMADVYSTR-------GSVME---------NRTVKMEVTKIPLCALDVRSIKLDVAELDGTNRKTLK-T 1192 (1576)
Q Consensus 1132 -~~~~-~~~~~~~~d~~~~~-------~~~~~---------~~~~~~~~~~~~~~avD~~~~~I~v~~ldG~~r~~l~-~ 1192 (1576)
+.+. ..+.+||+|+...+ +.... ...+.++.....+||+|+...+|.+++++|..++++. .
T Consensus 120 gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~ 199 (386)
T 3v65_B 120 ALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQ 199 (386)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECS
T ss_pred EEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecC
Confidence 1112 35678888863221 11000 0111222223457888888899999999999988875 5
Q ss_pred ccCCcceEEEeCCcceEEEecCCCcCeEEEEecCCCCcEEEEeccCCCCCcceEEEeccCCeEEEEcCCCCeEEEEeCCC
Q psy948 1193 AIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDG 1272 (1576)
Q Consensus 1193 ~l~~P~~iavdP~~g~lywtd~g~~~~I~ra~mdGs~~~~iv~~~~~l~~P~gLaiD~~~~rlYw~D~~~~~I~s~~~dG 1272 (1576)
.+..|++|||||..|+|||+||+..++|+|+.|||+.+++++. ..+.||+|||||+.+++|||+|...++|++++++|
T Consensus 200 ~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~--~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG 277 (386)
T 3v65_B 200 SLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD--THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 277 (386)
T ss_dssp SCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC--SSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTS
T ss_pred CCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEE--CCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 7899999999999999999999988999999999999888775 57999999999999999999999999999999999
Q ss_pred CceEEEEeCCCccceeEEeeeCCeEEEeccCCCcceeeccccccccccceecccccccCCCcceeeccCCceeccCCCcc
Q psy948 1273 KHKHIVISGQKVPHVFALTLFEDHIYWTDWNTKSINRADKFNAREIQAGILHHCMNITGGSGYLCTCYQGFIIDKNNAKK 1352 (1576)
Q Consensus 1273 ~~r~~v~~~~~~~~P~~lavfed~lYwtd~~~~~i~~~~k~~~~~~~~~~~~~c~n~~g~~~~~C~C~~G~~~~~~~~~~ 1352 (1576)
+.+++++.. .+.+|++|++++++|||+||.+++|.+++|.+|+....... .+.. |.|..+... .++
T Consensus 278 ~~~~~~~~~-~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~----~~~~--------p~gi~v~~~-~~q 343 (386)
T 3v65_B 278 SHRKAVISQ-GLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRN----KLHF--------PMDIHTLHP-QRQ 343 (386)
T ss_dssp CSCEEEECS-SCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEEC----SCSC--------CCCEEEESG-GGS
T ss_pred CeeEEEEEC-CCCCceEEEEECCEEEEeeCCCCeEEEEECCCCcceEEEcc----CCCC--------CceEEEEch-hcC
Confidence 999888753 48899999999999999999999999999998876553221 1111 445554432 234
Q ss_pred ccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCcee
Q psy948 1353 CLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCK 1396 (1576)
Q Consensus 1353 c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~ 1396 (1576)
....|+|..+|++|+|||++.+++|+|+||.||. ..+.+ +|.
T Consensus 344 ~~~~n~C~~~ng~C~~lCl~~~~~~~C~C~~g~~-~~d~~-~C~ 385 (386)
T 3v65_B 344 PAGKNRCGDNNGGCTHLCLPSGQNYTCACPTGFR-KINSH-ACA 385 (386)
T ss_dssp CCCCCTTTTSCTTSSSEEECCSSSCEEECCTTCB-CSSSS-CCB
T ss_pred cCCcCccccCCCCCCceeeeCCCCCeeECCCCCc-CCCCC-ccC
Confidence 4568999999999999999999999999999999 53332 675
No 10
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=100.00 E-value=9.1e-37 Score=393.20 Aligned_cols=303 Identities=22% Similarity=0.400 Sum_probs=228.5
Q ss_pred CccccccCCCcccccceeCC-CeeeeecCCCcccCCCCcccCCC--CceeecceeEEe----------------------
Q psy948 1077 VDECAKVETNQCGHKCVDTL-TGYYCECNTGYNDDDIGTVSPSS--NKVLTRSTVIYH---------------------- 1131 (1576)
Q Consensus 1077 idEC~~~~~~~Csq~C~Nt~-Gsy~C~C~~Gy~l~~~~~~~~~~--~~~~~~~~~~~~---------------------- 1131 (1576)
+|||+. ++++|+|+|+|++ |+|+|.|++||.|.+++..|... ..++++...+.+
T Consensus 265 ~n~C~~-~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~Ll~s~~~~i~~i~l~~~~~~~~~l~~~~~~~~~ 343 (628)
T 4a0p_A 265 WNECAS-SNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINRMVIDEQQSPDIILPIHSLRNVR 343 (628)
T ss_dssp CCTTTT-TGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEECCSSEEEEEETTEEEEECCCTTCCCCEECCCTTCSCEE
T ss_pred ceEecc-CCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCccccceeeeeccceEEEEecccccCceEEEEehhcCCce
Confidence 789986 5789999999999 99999999999998766544332 223333322221
Q ss_pred -eEee-ccceEEEEeeeec-------cCce----ee-----------cceEEEEeeecceeEEecCCCeEEEEeccCCce
Q psy948 1132 -VRIW-SSNVLVMADVYST-------RGSV----ME-----------NRTVKMEVTKIPLCALDVRSIKLDVAELDGTNR 1187 (1576)
Q Consensus 1132 -~~~~-~~~~~~~~d~~~~-------~~~~----~~-----------~~~~~~~~~~~~~~avD~~~~~I~v~~ldG~~r 1187 (1576)
+.+. ..+.|||+|+... .|.. .. ...+.+++....+||+|....+|+|++++|+.+
T Consensus 344 ~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~G~~~ 423 (628)
T 4a0p_A 344 AIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSV 423 (628)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCEE
T ss_pred EEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECCCCeE
Confidence 1222 2467888886321 1110 00 011222233445788888889999999999999
Q ss_pred Eecc-cccCCcceEEEeCCcceEEEecCCCcC-eEEEEecCCCCcEEEEeccCCCCCcceEEEeccCCeEEEEcCCCCeE
Q psy948 1188 KTLK-TAIQDPRGITLHPGIGYVYFSSWNLQA-YIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYI 1265 (1576)
Q Consensus 1188 ~~l~-~~l~~P~~iavdP~~g~lywtd~g~~~-~I~ra~mdGs~~~~iv~~~~~l~~P~gLaiD~~~~rlYw~D~~~~~I 1265 (1576)
++|. ..+.+|++|||||..|+||||||+..+ +|+|+.|||++++.|+. ..+.||+|||||+.+++|||+|++.+.|
T Consensus 424 ~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~~l~~--~~l~~P~gla~D~~~~~LYw~D~~~~~I 501 (628)
T 4a0p_A 424 GVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTEREVLFF--SGLSKPIALALDSRLGKLFWADSDLRRI 501 (628)
T ss_dssp EEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCEEEEC--SSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred EEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcEEEEe--ccCCCccEEEEeCCCCEEEEEeCCCCEE
Confidence 8875 578999999999999999999999886 99999999999988875 5799999999999999999999999999
Q ss_pred EEEeCCCCceEEEEeCCCccceeEEeeeCCeEEEeccCCCcceeeccccccccccceecccccccCCCcceeeccCCcee
Q psy948 1266 ASVDLDGKHKHIVISGQKVPHVFALTLFEDHIYWTDWNTKSINRADKFNAREIQAGILHHCMNITGGSGYLCTCYQGFII 1345 (1576)
Q Consensus 1266 ~s~~~dG~~r~~v~~~~~~~~P~~lavfed~lYwtd~~~~~i~~~~k~~~~~~~~~~~~~c~n~~g~~~~~C~C~~G~~~ 1345 (1576)
++++++|++|+++.. ..+.|||+|++|+++|||+||.+.+|.+++|++|+....... ++.. +.+...
T Consensus 502 ~~~~~dG~~r~~~~~-~~~~~P~glav~~~~ly~tD~~~~~i~~~~k~~G~~~~~i~~----~~~~--------~~~i~~ 568 (628)
T 4a0p_A 502 ESSDLSGANRIVLED-SNILQPVGLTVFENWLYWIDKQQQMIEKIDMTGREGRTKVQA----RIAQ--------LSDIHA 568 (628)
T ss_dssp EEEETTSCSCEEEEC-SSCSCEEEEEEETTEEEEEETTTTEEEEEETTSSSCCEEEEC----CCTT--------EEEEEE
T ss_pred EEEeCCCCceEEEEc-CCCCCcEEEEEECCEEEEEECCCCeEEEEECcCCCCcEEEec----cCCC--------CcceEE
Confidence 999999999999875 468999999999999999999999999999998876543211 1111 112221
Q ss_pred ccCCCccccCCCCccCCCCccccccccCC-CceEEEcCCCcEecCCCCCcee
Q psy948 1346 DKNNAKKCLDVDECATGIHHCSQVCTNLN-GTYACSCNAGFTLSDGLSGVCK 1396 (1576)
Q Consensus 1346 ~~~~~~~c~d~neC~~~~~~Cs~lC~n~~-gsy~C~Cp~G~~l~d~~~~~C~ 1396 (1576)
......+-...|+|..+|++|+|+|++.+ ++++|+||.||.|.++.+ +|-
T Consensus 569 ~~~~~~~~~~~n~c~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~-~~~ 619 (628)
T 4a0p_A 569 VKELNLQEYRQHPCAQDNGGCSHICLVKGDGTTRCSCPMHLVLLQDEL-SCG 619 (628)
T ss_dssp ECCCCHHHHHHSTTTTGGGGCSSEEEECTTSCEEEECCTTEEECTTSS-CEE
T ss_pred EeecccCccccccCCCCCCCcchhcccCCCCCeeeeCCCCCEECCCCC-cCC
Confidence 11111111246899989999999999876 468999999999985544 675
No 11
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=100.00 E-value=2e-36 Score=389.73 Aligned_cols=301 Identities=28% Similarity=0.590 Sum_probs=229.3
Q ss_pred CccccccCCCcccccceeCC--CeeeeecCCCcccCCCCcccCC-CC--ceeecceeEEee-------------------
Q psy948 1077 VDECAKVETNQCGHKCVDTL--TGYYCECNTGYNDDDIGTVSPS-SN--KVLTRSTVIYHV------------------- 1132 (1576)
Q Consensus 1077 idEC~~~~~~~Csq~C~Nt~--Gsy~C~C~~Gy~l~~~~~~~~~-~~--~~~~~~~~~~~~------------------- 1132 (1576)
.|+|+. ++++|+|+|++++ ++|+|.|++||.|.++++.|.. .. .+++.+..++.+
T Consensus 272 ~n~C~~-~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~Ll~~~~~~i~~i~l~~~~~~~~~~~~~~l~~ 350 (619)
T 3s94_A 272 TNPCGI-DNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLLLARRTDLRRISLDTPDFTDIVLQLEDIRH 350 (619)
T ss_dssp CCTTTT-TGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSEEEEEEESSCEEEEESSSTTCCCEECCCSCCSS
T ss_pred cccccC-CCCcccceEECCCCCCCceEeCCchheecccCcccCCCCceEEEEEcccceEEEecCCCccceeEEeccccCc
Confidence 466765 5799999999987 4799999999999877665543 22 223333222222
Q ss_pred ----Eeec-cceEEEEeeeec-------cCcee---------ecceEEEEeeecceeEEecCCCeEEEEeccCCceEecc
Q psy948 1133 ----RIWS-SNVLVMADVYST-------RGSVM---------ENRTVKMEVTKIPLCALDVRSIKLDVAELDGTNRKTLK 1191 (1576)
Q Consensus 1133 ----~~~~-~~~~~~~d~~~~-------~~~~~---------~~~~~~~~~~~~~~~avD~~~~~I~v~~ldG~~r~~l~ 1191 (1576)
.+.+ .+.+||+|+... .|... ....+.+++....+||+|....+|+|++++|+.+++|.
T Consensus 351 ~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~l~ 430 (619)
T 3s94_A 351 AIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILI 430 (619)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred cEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEEEE
Confidence 1222 467888875321 12110 01122333334567888888899999999999998885
Q ss_pred -cccCCcceEEEeCCcceEEEecCCCcCeEEEEecCCCCcEEEEeccCCCCCcceEEEeccCCeEEEEcCCCCeEEEEeC
Q psy948 1192 -TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDL 1270 (1576)
Q Consensus 1192 -~~l~~P~~iavdP~~g~lywtd~g~~~~I~ra~mdGs~~~~iv~~~~~l~~P~gLaiD~~~~rlYw~D~~~~~I~s~~~ 1270 (1576)
+.|.+|++|||||..|+|||+||+..++|+|+.|||++++.++. ..+.||+|||||+.+++|||+|++.++|+++++
T Consensus 431 ~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~--~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~ 508 (619)
T 3s94_A 431 SEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVN--TSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNT 508 (619)
T ss_dssp CTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC--SSCSCEEEEEEETTTTEEEEEETTTTEEEEEES
T ss_pred ECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEe--CCCCCCeeeEEcccCCEEEEEECCCCEEEEEec
Confidence 68999999999999999999999999999999999999987774 579999999999999999999999999999999
Q ss_pred CCCceEEEEeCCCccceeEEeeeCCeEEEeccCCCcceeeccccccccccceecccccccCCCcceeeccCCceeccCCC
Q psy948 1271 DGKHKHIVISGQKVPHVFALTLFEDHIYWTDWNTKSINRADKFNAREIQAGILHHCMNITGGSGYLCTCYQGFIIDKNNA 1350 (1576)
Q Consensus 1271 dG~~r~~v~~~~~~~~P~~lavfed~lYwtd~~~~~i~~~~k~~~~~~~~~~~~~c~n~~g~~~~~C~C~~G~~~~~~~~ 1350 (1576)
+|+.+++++. ..+.|||+|++++++|||+||.+++|.+++|.++.. .. +.. ++.. +.+..+...
T Consensus 509 dG~~~~~~~~-~~l~~P~glav~~~~ly~tD~~~~~I~~~~k~~g~~-~~-~~~---~~~~--------~~~i~~~~~-- 572 (619)
T 3s94_A 509 DGTGRRVLVE-DKIPHIFGFTLLGDYVYWTDWQRRSIERVHKRSAER-EV-IID---QLPD--------LMGLKATNV-- 572 (619)
T ss_dssp SSCCCEEEEE-CCCCSSCCEEEETTEEEEECTTSSCEEEEESSSCCE-EE-EEC---SCCC--------EEEEEEEES--
T ss_pred CCCceEEEec-cCCCCcEEEEEECCEEEEeecCCCeEEEEEcCCCce-EE-Eec---CCCC--------Cceeeeccc--
Confidence 9999998876 458999999999999999999999999999999833 21 111 1111 112222211
Q ss_pred ccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceec
Q psy948 1351 KKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKA 1397 (1576)
Q Consensus 1351 ~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~ 1397 (1576)
..-...|+|..+|++|+|+|++++++|+|.||.||.|..+.+ +|..
T Consensus 573 ~~~~~~~~C~~~ng~C~~~C~~~~~~~~C~C~~g~~l~~d~~-~C~~ 618 (619)
T 3s94_A 573 HRVIGSNPCAEENGGCSHLCLYRPQGLRCACPIGFELISDMK-TCIV 618 (619)
T ss_dssp SCCCCCCGGGSGGGGCSSEEEEETTEEEEECCTTCEECSSTT-CEEC
T ss_pred ccccccccCCCCCCChhHhhccCCCCeEEECCCCCEECCCCC-cCCC
Confidence 112367999999999999999999999999999999985543 6863
No 12
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=100.00 E-value=6.8e-34 Score=348.75 Aligned_cols=240 Identities=33% Similarity=0.613 Sum_probs=208.7
Q ss_pred ceecccccccCCCcceeeccCCceeccCCCccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceeccCC
Q psy948 1321 GILHHCMNITGGSGYLCTCYQGFIIDKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKANDN 1400 (1576)
Q Consensus 1321 ~~~~~c~n~~g~~~~~C~C~~G~~~~~~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~~~ 1400 (1576)
.+.+.|.|++++ |.|.|++||.+. .++.|+++|||.. ++.|++.|+|++|+|+|.|++||.|..+.+ +|+....
T Consensus 9 ~c~~~C~~~~~~--y~C~C~~G~~~~--~~~~C~dideC~~-~~~C~~~C~n~~g~~~C~C~~g~~~~~~~~-~C~~~~~ 82 (400)
T 3p5b_L 9 GCSHVCNDLKIG--YECLCPDGFQLV--AQRRCEDIDECQD-PDTCSQLCVNLEGGYKCQCEEGFQLDPHTK-ACKAVGS 82 (400)
T ss_dssp GCSSEEEECSSS--EEEECCTTEEEC--SSSCEEECCCCST-TSSCSSCCBCCSSSCBCCCCTTCCCCTTTS-SCCCSTT
T ss_pred CCCCEeECCCCC--eEEECCCCCCcC--CCCcccCchhhhc-cCCCCCccCCCccceeeecccccccccccc-ceeeccc
Confidence 355789999886 999999999983 4688999999984 679999999999999999999999985543 7998888
Q ss_pred ceEEEEecCCceeeeccccccccccccccccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeecc
Q psy948 1401 KLTIVYSNGPEIRAYETHKRRFRDVISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSI 1480 (1576)
Q Consensus 1401 ~~~ll~s~~~~Ir~i~~~~~~~~~~v~~~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~ 1480 (1576)
.++|+++++..|+++.++...+..++....++++|+||+.+++|||+|...++|+|+.+++..... ....++...+
T Consensus 83 ~~~ll~~~~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~----~~~~~~~~~~ 158 (400)
T 3p5b_L 83 IAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS----SYDTVISRDI 158 (400)
T ss_dssp SCEEEEEETTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------C----CCEEEECSSC
T ss_pred cceeEEeccceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCC----cceEEEeCCC
Confidence 899999999999999999888777888888999999999999999999999999999987643100 0011222357
Q ss_pred CCcceeeecCCCCeEEEeecCCCCCCCCCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEecCCCCcEEEeec
Q psy948 1481 GKLTAIAVDWIAHNIYWTVSDRSGSKPKGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAETGASPRIESAWM 1560 (1576)
Q Consensus 1481 ~~p~glAVDwv~~nLYWTD~~~~~~~~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~m 1560 (1576)
..|.||||||++++|||+|.. .++|+|++++|+.+++|+...+..|++|||||..|+||||||+..++|+|++|
T Consensus 159 ~~p~glavD~~~~~lY~~d~~------~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~ 232 (400)
T 3p5b_L 159 QAPDGLAVDWIHSNIYWTDSV------LGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL 232 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETT------TTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEET
T ss_pred CCcccEEEEecCCceEEEECC------CCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeC
Confidence 799999999999999999986 58999999999999999999999999999999999999999998889999999
Q ss_pred CCCCcEEEEecCCCCC
Q psy948 1561 DGSHRSATQISNRQAP 1576 (1576)
Q Consensus 1561 DGs~r~~i~~~~~~~P 1576 (1576)
||+.+++|+...+.+|
T Consensus 233 dG~~~~~~~~~~l~~P 248 (400)
T 3p5b_L 233 NGVDIYSLVTENIQWP 248 (400)
T ss_dssp TSCSCEEEECSSCSCE
T ss_pred CCCccEEEEECCCCce
Confidence 9999999999988887
No 13
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=100.00 E-value=2.2e-32 Score=333.92 Aligned_cols=237 Identities=32% Similarity=0.620 Sum_probs=172.1
Q ss_pred ceecccccccCCCcceeeccCCceeccCCCccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceeccCC
Q psy948 1321 GILHHCMNITGGSGYLCTCYQGFIIDKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKANDN 1400 (1576)
Q Consensus 1321 ~~~~~c~n~~g~~~~~C~C~~G~~~~~~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~~~ 1400 (1576)
.+.+.|.+..|+ |+|.|++||.+..+ ++.|.++|||. .++.|+|.|+|++|+|+|.|++||.|..+.+ +|+..++
T Consensus 12 ~c~~~C~~~~g~--~~C~C~~G~~l~~~-~~~C~d~~eC~-~~~~C~~~C~~~~g~~~C~C~~g~~l~~d~~-~C~~~~~ 86 (386)
T 3v65_B 12 GCAQKCQMIRGA--VQCTCHTGYRLTED-GRTCQDVNECA-EEGYCSQGCTNSEGAFQCWCEAGYELRPDRR-SCKALGP 86 (386)
T ss_dssp --------------------------------------------CCTTEEC-----CCEECCTTEEECTTSS-CEEECSS
T ss_pred CCCCCCcCCCCC--cEeECCCCceECCC-CCccCccceeC-CcCcccCcCCCCCCCCeEEECCCceEcCCCC-eECCccc
Confidence 355678787776 99999999998653 78999999998 4689999999999999999999999975443 7998888
Q ss_pred ceEEEEecCCceeeeccccccccccccccccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeecc
Q psy948 1401 KLTIVYSNGPEIRAYETHKRRFRDVISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSI 1480 (1576)
Q Consensus 1401 ~~~ll~s~~~~Ir~i~~~~~~~~~~v~~~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~ 1480 (1576)
..+|++++...|+++.+.+..+..++....++.+|+||+.+++|||+|...++|+|+.+++.....+ ...++
T Consensus 87 ~~~l~~~~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~--------~~~~~ 158 (386)
T 3v65_B 87 EPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEV--------VSTGL 158 (386)
T ss_dssp CCEEEEECBSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEE--------ECSSC
T ss_pred cceeEeecCccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEE--------EeCCC
Confidence 8899999999999999988777777778889999999999999999999999999999887543222 22456
Q ss_pred CCcceeeecCCCCeEEEeecCCCCCCCCCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEecCCCCcEEEeec
Q psy948 1481 GKLTAIAVDWIAHNIYWTVSDRSGSKPKGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAETGASPRIESAWM 1560 (1576)
Q Consensus 1481 ~~p~glAVDwv~~nLYWTD~~~~~~~~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~m 1560 (1576)
..|.||||||.+++|||+|.. .++|++++++|+.+++|+..++..|++|||||..|+|||||++..++|+|++|
T Consensus 159 ~~p~glavd~~~g~lY~~d~~------~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~ 232 (386)
T 3v65_B 159 ESPGGLAVDWVHDKLYWTDSG------TSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSM 232 (386)
T ss_dssp SCCCCEEEETTTTEEEEEETT------TTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred CCccEEEEEeCCCeEEEEcCC------CCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeC
Confidence 789999999999999999986 57999999999999999988999999999999999999999998789999999
Q ss_pred CCCCcEEEEecCCCCC
Q psy948 1561 DGSHRSATQISNRQAP 1576 (1576)
Q Consensus 1561 DGs~r~~i~~~~~~~P 1576 (1576)
||+.+++|+...+.+|
T Consensus 233 dG~~~~~~~~~~~~~P 248 (386)
T 3v65_B 233 DGSGRRIIADTHLFWP 248 (386)
T ss_dssp TSCSCEEEECSSCSCE
T ss_pred CCCCcEEEEECCCCCe
Confidence 9999999999888887
No 14
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.97 E-value=1.4e-29 Score=300.47 Aligned_cols=218 Identities=35% Similarity=0.671 Sum_probs=183.4
Q ss_pred ecceeEEecCCCeEEEEeccCCceEecc-cccCCcceEEEeCCcceEEEecCCCcCeEEEEecCCCCcEEEEeccCCCCC
Q psy948 1164 KIPLCALDVRSIKLDVAELDGTNRKTLK-TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAW 1242 (1576)
Q Consensus 1164 ~~~~~avD~~~~~I~v~~ldG~~r~~l~-~~l~~P~~iavdP~~g~lywtd~g~~~~I~ra~mdGs~~~~iv~~~~~l~~ 1242 (1576)
...+||+|....+|.+++++|..+++|. ..+..|++|||||..|+|||+||+..++|+|+.|||+.+++++. ..+.+
T Consensus 90 ~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~--~~l~~ 167 (318)
T 3sov_A 90 GEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIIN--SEIYW 167 (318)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEEC--SSCSC
T ss_pred CCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEE--CCCCC
Confidence 3457888888899999999999988885 78899999999999999999999988999999999999888775 46999
Q ss_pred cceEEEeccCCeEEEEcCCCCeEEEEeCCCCceEEEEeCCCccceeEEeeeCCeEEEeccCCCcceeeccccccccccce
Q psy948 1243 PNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLFEDHIYWTDWNTKSINRADKFNAREIQAGI 1322 (1576)
Q Consensus 1243 P~gLaiD~~~~rlYw~D~~~~~I~s~~~dG~~r~~v~~~~~~~~P~~lavfed~lYwtd~~~~~i~~~~k~~~~~~~~~~ 1322 (1576)
|+|||||+.+++|||+|...++|++++++|+++++++. ..+.+|++|+++++.+||+||.+..|.++++.+|+......
T Consensus 168 Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~-~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 168 PNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVK-GSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIH 246 (318)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-SCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred ccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEec-CCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCCceEEEe
Confidence 99999999999999999999999999999999998875 35899999999999999999999999999999887654321
Q ss_pred ecccccccCCCcceeeccCCceeccCCCccccCCCCccCCCCccccccccCCC--ceEEEcCCCcEecCCCCCceecc
Q psy948 1323 LHHCMNITGGSGYLCTCYQGFIIDKNNAKKCLDVDECATGIHHCSQVCTNLNG--TYACSCNAGFTLSDGLSGVCKAN 1398 (1576)
Q Consensus 1323 ~~~c~n~~g~~~~~C~C~~G~~~~~~~~~~c~d~neC~~~~~~Cs~lC~n~~g--sy~C~Cp~G~~l~d~~~~~C~~~ 1398 (1576)
. .+. -|.+..+... .++....|+|..+|++|+|+|++.++ +|+|+||.||.|..+.+ +|.+.
T Consensus 247 ~----~~~--------~P~~i~v~~~-~~q~~~~n~C~~~ng~Cs~~C~~~~~~~~~~C~C~~g~~l~~d~~-~c~~~ 310 (318)
T 3sov_A 247 S----DIF--------SPMDIHAFSQ-QRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGK-TCKDG 310 (318)
T ss_dssp C----CCS--------SCCCEEEECG-GGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECSTTCCBCTTSS-CBCC-
T ss_pred C----CCC--------CCcEEEEecc-ccccccccccccCCCCcceEEecCCCCCCeEEECCCCCEECCCCC-CCCCC
Confidence 1 111 1444544332 23334579999999999999999876 79999999999985554 68753
No 15
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.97 E-value=5.7e-30 Score=308.35 Aligned_cols=205 Identities=32% Similarity=0.588 Sum_probs=174.3
Q ss_pred CCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceeccCCceEEEEecCCceeeeccccccccccccccccceee
Q psy948 1356 VDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKANDNKLTIVYSNGPEIRAYETHKRRFRDVISDERRIEAL 1435 (1576)
Q Consensus 1356 ~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~~~~~~ll~s~~~~Ir~i~~~~~~~~~~v~~~~~i~al 1435 (1576)
+|||+ .+++|+|+|+|++|+|+|.|++||.|..+.+ +|+..++..+|++++...|+++.+++..+..++....++.+|
T Consensus 1 i~ec~-~~~~C~~~C~n~~g~~~C~C~~g~~l~~d~~-~C~~~~~~~~ll~~~~~~I~~i~~~g~~~~~~~~~~~~~~~l 78 (349)
T 3v64_C 1 VNECA-EEGYCSQGCTNSEGAFQCWCEAGYELRPDRR-SCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIAL 78 (349)
T ss_dssp ---------CCSSEECCC---CCEECCTTEEECTTSS-CEEESSSCCEEEEECBSCEEEECTTSCCEEEEECSCSCEEEE
T ss_pred CcccC-CCCCCcCeeecCCCCeEEECCCCccCCCCCC-cccccccCceeEeecccceEEEeCCCCeeEEeecCCCceEEE
Confidence 57898 6899999999999999999999999986544 899887788999999999999999887777777778889999
Q ss_pred ecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCCCCeEEEEE
Q psy948 1436 DIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPKGKVMVAH 1515 (1576)
Q Consensus 1436 d~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~~~I~v~~ 1515 (1576)
+||+.+++|||+|...++|+|+.+++.....+ ...++..|.||||||.+++|||+|.. .++|++++
T Consensus 79 ~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~--------~~~~~~~p~glavd~~~g~ly~~d~~------~~~I~~~~ 144 (349)
T 3v64_C 79 DFHHRRELVFWSDVTLDRILRANLNGSNVEEV--------VSTGLESPGGLAVDWVHDKLYWTDSG------TSRIEVAN 144 (349)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSCEEE--------ECSSCSCCCEEEEETTTTEEEEEETT------TTEEEEEE
T ss_pred EEeccccEEEEEeccCCceEEEecCCCCceEE--------EeCCCCCccEEEEecCCCeEEEEcCC------CCeEEEEc
Confidence 99999999999999999999999887654332 22346789999999999999999985 57999999
Q ss_pred cCCCceEEEeeCCCCCceEEEEecCCCeEEEEecCCCCcEEEeecCCCCcEEEEecCCCCC
Q psy948 1516 NDGRYRRSLVSENLESPSSIALDPTLGKMFWAETGASPRIESAWMDGSHRSATQISNRQAP 1576 (1576)
Q Consensus 1516 ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~mDGs~r~~i~~~~~~~P 1576 (1576)
++|+.+++|+...+..|++|||||..|+|||||++..++|+|++|||+.+++|+...+.+|
T Consensus 145 ~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~P 205 (349)
T 3v64_C 145 LDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWP 205 (349)
T ss_dssp TTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCE
T ss_pred CCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCc
Confidence 9999999999889999999999999999999999986899999999999999998888887
No 16
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.96 E-value=5e-28 Score=287.43 Aligned_cols=217 Identities=28% Similarity=0.596 Sum_probs=182.3
Q ss_pred ecceeEEecCCCeEEEEeccCCceEecc-cccCCcceEEEeCCcceEEEecCCCcCeEEEEecCCCCcEEEEeccCCCCC
Q psy948 1164 KIPLCALDVRSIKLDVAELDGTNRKTLK-TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAW 1242 (1576)
Q Consensus 1164 ~~~~~avD~~~~~I~v~~ldG~~r~~l~-~~l~~P~~iavdP~~g~lywtd~g~~~~I~ra~mdGs~~~~iv~~~~~l~~ 1242 (1576)
...+||+|....+|.+.+++|..++++. ..+..|++|||||..|+|||+||+..++|+|+.|||+.+++++. ..+.|
T Consensus 88 ~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~--~~~~~ 165 (316)
T 1ijq_A 88 HSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT--ENIQW 165 (316)
T ss_dssp TTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEEC--SSCSC
T ss_pred CCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEE--CCCCC
Confidence 3457888888899999999999888875 47899999999999999999999977899999999999877765 46899
Q ss_pred cceEEEeccCCeEEEEcCCCCeEEEEeCCCCceEEEEeC-CCccceeEEeeeCCeEEEeccCCCcceeeccccccccccc
Q psy948 1243 PNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISG-QKVPHVFALTLFEDHIYWTDWNTKSINRADKFNAREIQAG 1321 (1576)
Q Consensus 1243 P~gLaiD~~~~rlYw~D~~~~~I~s~~~dG~~r~~v~~~-~~~~~P~~lavfed~lYwtd~~~~~i~~~~k~~~~~~~~~ 1321 (1576)
|+|||+|+.+++|||+|...++|++++++|+.+++++.. ..+.+|++|++++++|||+||.+++|.++++++++.+...
T Consensus 166 P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~g~~~~~i 245 (316)
T 1ijq_A 166 PNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLL 245 (316)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred ceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEECCEEEEEECCCCeEEEEeCCCCcceEEE
Confidence 999999999999999999999999999999999988764 4688999999999999999999999999999988765432
Q ss_pred eecccccccCCCcceeeccCCceeccCCCccccCCCCccCC---CCccccccccCC------CceEEEcCCCcEecCCCC
Q psy948 1322 ILHHCMNITGGSGYLCTCYQGFIIDKNNAKKCLDVDECATG---IHHCSQVCTNLN------GTYACSCNAGFTLSDGLS 1392 (1576)
Q Consensus 1322 ~~~~c~n~~g~~~~~C~C~~G~~~~~~~~~~c~d~neC~~~---~~~Cs~lC~n~~------gsy~C~Cp~G~~l~d~~~ 1392 (1576)
.. ++.. |.|..+... ..+....|+|..+ |++|+|+|++++ ++|+|.||.||.|..+.+
T Consensus 246 ~~----~~~~--------p~~i~v~~~-~~qp~~~n~C~~~~~~ng~Cs~~C~~~p~~~~~~~~~~C~C~~g~~l~~d~~ 312 (316)
T 1ijq_A 246 AE----NLLS--------PEDMVLFHN-LTQPRGVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMR 312 (316)
T ss_dssp EC----SCSC--------CCCEEEESG-GGSCCCCCTTSSSSSGGGGCSSEEEECCCCSTTCCSEEEECCTTCEECTTSS
T ss_pred ec----CCCC--------ceEEEEecc-ccCCcccccccccccCCCCcCcccCCCccccCCCCCeEeeCCCCCEECCCCC
Confidence 11 1111 445544432 3344578999988 899999999886 689999999999985554
Q ss_pred Ccee
Q psy948 1393 GVCK 1396 (1576)
Q Consensus 1393 ~~C~ 1396 (1576)
+|.
T Consensus 313 -~C~ 315 (316)
T 1ijq_A 313 -SCL 315 (316)
T ss_dssp -CEE
T ss_pred -ccC
Confidence 685
No 17
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.90 E-value=8.3e-22 Score=233.69 Aligned_cols=236 Identities=18% Similarity=0.353 Sum_probs=188.0
Q ss_pred CCeEEEEeccCCc--eEecccccCCcceEEEeCCcceEEEecCCCcCeEEEEecCCCCc-EEEEeccCCCCCcceEEEec
Q psy948 1174 SIKLDVAELDGTN--RKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNF-TRILTHEDDIAWPNALTLDY 1250 (1576)
Q Consensus 1174 ~~~I~v~~ldG~~--r~~l~~~l~~P~~iavdP~~g~lywtd~g~~~~I~ra~mdGs~~-~~iv~~~~~l~~P~gLaiD~ 1250 (1576)
...|.+.++++.. .+.++.++..|.+|+.++..+.|||+|.. ..+|.|+.++|+.. +.++. ..+..|.|||+|.
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~-~~~I~r~~~~g~~~~~~~~~--~~l~~p~glavd~ 88 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVS-EEAIKRTEFNKTESVQNVVV--SGLLSPDGLACDW 88 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETT-TTEEEEEETTSSSCCCEEEE--ECCSCCCEEEEET
T ss_pred cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECC-CCcEEEEEccCCCceEEEEc--CCCCCccEEEEEc
Confidence 3567777888874 44556788899999999999999999976 46899999999864 33443 4688999999999
Q ss_pred cCCeEEEEcCCCCeEEEEeCCCCceEEEEeCCCccceeEEeeeCCeEEEeccCCCcceeeccccccccccceeccccccc
Q psy948 1251 FTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLFEDHIYWTDWNTKSINRADKFNAREIQAGILHHCMNIT 1330 (1576)
Q Consensus 1251 ~~~rlYw~D~~~~~I~s~~~dG~~r~~v~~~~~~~~P~~lavfed~lYwtd~~~~~i~~~~k~~~~~~~~~~~~~c~n~~ 1330 (1576)
..++|||+|...++|+.++++|+.+++++..
T Consensus 89 ~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~------------------------------------------------- 119 (318)
T 3sov_A 89 LGEKLYWTDSETNRIEVSNLDGSLRKVLFWQ------------------------------------------------- 119 (318)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEEEECS-------------------------------------------------
T ss_pred CCCeEEEEECCCCEEEEEECCCCcEEEEEeC-------------------------------------------------
Confidence 9999999999999999888887655443210
Q ss_pred CCCcceeeccCCceeccCCCccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceeccCCceEEEEecCC
Q psy948 1331 GGSGYLCTCYQGFIIDKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKANDNKLTIVYSNGP 1410 (1576)
Q Consensus 1331 g~~~~~C~C~~G~~~~~~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~~~~~~ll~s~~~ 1410 (1576)
T Consensus 120 -------------------------------------------------------------------------------- 119 (318)
T 3sov_A 120 -------------------------------------------------------------------------------- 119 (318)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeeccccccccccccccccceeeecccCCcEEEEeecc-cceeEEEeecccccceeeecccceeeeeccCCcceeeec
Q psy948 1411 EIRAYETHKRRFRDVISDERRIEALDIDPVDEIIYWVDSY-DRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVD 1489 (1576)
Q Consensus 1411 ~Ir~i~~~~~~~~~~v~~~~~i~ald~D~~~~~vYWsD~~-~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVD 1489 (1576)
....+.+|++|+..+.|||+|.. ...|+|+.++|.....++ ..++..|.|||||
T Consensus 120 -----------------~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~--------~~~l~~Pnglavd 174 (318)
T 3sov_A 120 -----------------ELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIII--------NSEIYWPNGLTLD 174 (318)
T ss_dssp -----------------SCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEE--------CSSCSCEEEEEEE
T ss_pred -----------------CCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEE--------ECCCCCccEEEEe
Confidence 00123467778888999999975 689999998876543322 2346789999999
Q ss_pred CCCCeEEEeecCCCCCCCCCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEecCCCCcEEEeec-CCCCcEEE
Q psy948 1490 WIAHNIYWTVSDRSGSKPKGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAETGASPRIESAWM-DGSHRSAT 1568 (1576)
Q Consensus 1490 wv~~nLYWTD~~~~~~~~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~m-DGs~r~~i 1568 (1576)
+..++|||+|+. .++|++++++|+.+++|+...+..|.+|||+ .+.||||||+.. +|.|+++ +|+.+++|
T Consensus 175 ~~~~~lY~aD~~------~~~I~~~d~dG~~~~~~~~~~~~~P~glav~--~~~lywtd~~~~-~V~~~~~~~G~~~~~i 245 (318)
T 3sov_A 175 YEEQKLYWADAK------LNFIHKSNLDGTNRQAVVKGSLPHPFALTLF--EDILYWTDWSTH-SILACNKYTGEGLREI 245 (318)
T ss_dssp TTTTEEEEEETT------TTEEEEEETTSCSCEEEECSCCSCEEEEEEE--TTEEEEEETTTT-EEEEEETTTCCSCEEE
T ss_pred ccCCEEEEEECC------CCEEEEEcCCCCceEEEecCCCCCceEEEEe--CCEEEEEecCCC-eEEEEECCCCCceEEE
Confidence 999999999985 6899999999999999998789999999998 579999999865 8999999 79887776
Q ss_pred EecCCCCC
Q psy948 1569 QISNRQAP 1576 (1576)
Q Consensus 1569 ~~~~~~~P 1576 (1576)
.. .+..|
T Consensus 246 ~~-~~~~P 252 (318)
T 3sov_A 246 HS-DIFSP 252 (318)
T ss_dssp EC-CCSSC
T ss_pred eC-CCCCC
Confidence 54 34444
No 18
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.89 E-value=6.8e-21 Score=225.99 Aligned_cols=235 Identities=21% Similarity=0.389 Sum_probs=182.4
Q ss_pred CeEEEEeccCCceEecccccCCcceEEEeCCcceEEEecCCCcCeEEEEecCC----CCcEEEEeccCCCCCcceEEEec
Q psy948 1175 IKLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDG----SNFTRILTHEDDIAWPNALTLDY 1250 (1576)
Q Consensus 1175 ~~I~v~~ldG~~r~~l~~~l~~P~~iavdP~~g~lywtd~g~~~~I~ra~mdG----s~~~~iv~~~~~l~~P~gLaiD~ 1250 (1576)
..|.+.++++.....++..+.+|.+|++|+..+.|||+|.. ..+|.++.++| +..+.++. ..+..|.|||+|.
T Consensus 10 ~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~-~~~I~~~~~~g~~~~~~~~~~~~--~~~~~p~glavd~ 86 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLS-QRMICSTQLDRAHGVSSYDTVIS--RDIQAPDGLAVDW 86 (316)
T ss_dssp SSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETT-TTEEEEEEC--------CEEEEC--SSCSCCCEEEEET
T ss_pred CeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECC-CCcEEEEECCCCCCCcccEEEEe--CCCCCcCEEEEee
Confidence 44667778877666677788999999999999999999975 56899999998 55555543 4678999999999
Q ss_pred cCCeEEEEcCCCCeEEEEeCCCCceEEEEeCCCccceeEEeeeCCeEEEeccCCCcceeeccccccccccceeccccccc
Q psy948 1251 FTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLFEDHIYWTDWNTKSINRADKFNAREIQAGILHHCMNIT 1330 (1576)
Q Consensus 1251 ~~~rlYw~D~~~~~I~s~~~dG~~r~~v~~~~~~~~P~~lavfed~lYwtd~~~~~i~~~~k~~~~~~~~~~~~~c~n~~ 1330 (1576)
.+++|||+|...++|+.++++|..+++++..
T Consensus 87 ~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~------------------------------------------------- 117 (316)
T 1ijq_A 87 IHSNIYWTDSVLGTVSVADTKGVKRKTLFRE------------------------------------------------- 117 (316)
T ss_dssp TTTEEEEEETTTTEEEEEETTSSSEEEEEEC-------------------------------------------------
T ss_pred cCCeEEEEECCCCEEEEEeCCCCceEEEEEC-------------------------------------------------
Confidence 9999999999988888877776544332110
Q ss_pred CCCcceeeccCCceeccCCCccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceeccCCceEEEEecCC
Q psy948 1331 GGSGYLCTCYQGFIIDKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKANDNKLTIVYSNGP 1410 (1576)
Q Consensus 1331 g~~~~~C~C~~G~~~~~~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~~~~~~ll~s~~~ 1410 (1576)
T Consensus 118 -------------------------------------------------------------------------------- 117 (316)
T 1ijq_A 118 -------------------------------------------------------------------------------- 117 (316)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeeccccccccccccccccceeeecccCCcEEEEeeccc-ceeEEEeecccccceeeecccceeeeeccCCcceeeec
Q psy948 1411 EIRAYETHKRRFRDVISDERRIEALDIDPVDEIIYWVDSYD-RNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVD 1489 (1576)
Q Consensus 1411 ~Ir~i~~~~~~~~~~v~~~~~i~ald~D~~~~~vYWsD~~~-~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVD 1489 (1576)
....+.+|++|+..++|||+|... ++|+|+.++|.....+. ...+..|.|||||
T Consensus 118 -----------------~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~--------~~~~~~P~gla~d 172 (316)
T 1ijq_A 118 -----------------NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV--------TENIQWPNGITLD 172 (316)
T ss_dssp -----------------TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEE--------CSSCSCEEEEEEE
T ss_pred -----------------CCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEE--------ECCCCCceEEEEe
Confidence 001245677888899999999876 79999988876543221 1246789999999
Q ss_pred CCCCeEEEeecCCCCCCCCCeEEEEEcCCCceEEEeeC--CCCCceEEEEecCCCeEEEEecCCCCcEEEeec-CCCCcE
Q psy948 1490 WIAHNIYWTVSDRSGSKPKGKVMVAHNDGRYRRSLVSE--NLESPSSIALDPTLGKMFWAETGASPRIESAWM-DGSHRS 1566 (1576)
Q Consensus 1490 wv~~nLYWTD~~~~~~~~~~~I~v~~ldG~~~~~lv~~--~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~m-DGs~r~ 1566 (1576)
+..++|||+|.. .++|++.+++|+.+++++.. .+..|.+|||+ .++||||||+.+ +|.|++. +|+..+
T Consensus 173 ~~~~~lY~~D~~------~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~--~~~ly~~d~~~~-~V~~~~~~~g~~~~ 243 (316)
T 1ijq_A 173 LLSGRLYWVDSK------LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINE-AIFSANRLTGSDVN 243 (316)
T ss_dssp TTTTEEEEEETT------TTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTT-EEEEEETTTCCCCE
T ss_pred ccCCEEEEEECC------CCeEEEEecCCCceEEEeecCCccCCcEEEEEE--CCEEEEEECCCC-eEEEEeCCCCcceE
Confidence 999999999985 58999999999999998863 58899999997 589999999865 8999986 798887
Q ss_pred EEEecCCCCC
Q psy948 1567 ATQISNRQAP 1576 (1576)
Q Consensus 1567 ~i~~~~~~~P 1576 (1576)
+|... +..|
T Consensus 244 ~i~~~-~~~p 252 (316)
T 1ijq_A 244 LLAEN-LLSP 252 (316)
T ss_dssp EEECS-CSCC
T ss_pred EEecC-CCCc
Confidence 77543 4433
No 19
>2fyj_A Low-density lipoprotein receptor-related protein 1; double module, complement type repeat, calcium, beta-2 hairpin, loop-structures; NMR {Homo sapiens} PDB: 2fyl_B
Probab=99.78 E-value=2.3e-19 Score=166.12 Aligned_cols=77 Identities=47% Similarity=1.098 Sum_probs=73.4
Q ss_pred CCCCCCceecCCCeEEeCcccCCCCCCCCCCCCC-CCcccccccC-CceecCCCceecceeccCCCCCCCCCCCCCCCC
Q psy948 547 RQCSESEFQCKNGKCIPAQWRCDHDEDCTDGSDE-MECGGFQCKN-GTFQCSSGHCIAAYFRCDGDRDCRDLSDEMNCP 623 (1576)
Q Consensus 547 ~~C~~~~f~C~~g~Ci~~~~~CDg~~DC~dgsDE-~~C~~~~C~~-~~f~C~~g~Ci~~~~~Cdg~~dC~d~sDE~~C~ 623 (1576)
++|++.+|+|.+|+|||.+|+|||+.||.||||| .+|....|.+ .+|+|.+|+||+..|+|||+.||.|||||.+|+
T Consensus 3 ~~C~~~~f~C~~g~Ci~~~~~CDg~~DC~DgsDE~~~C~~~~C~~~~~f~C~~g~CI~~~~~CDG~~DC~DgSDE~~C~ 81 (82)
T 2fyj_A 3 RTCPPNQFSCASGRCIPISWTCDLDDDCGDRSDESASCAYPTCFPLTQFTCNNGRCININWRCDNDNDCGDNSDEAGCS 81 (82)
T ss_dssp SSSCTTEEETTSSCEEETTSSSSCSSSSCSTTTTTSSCCCSSSCSSSEEECTTSCEEETTCBSSSSBCCSSSSSCSCCC
T ss_pred CCCCCCceEeCCCCEEeccccCCCcccCCCccccccccccccCCCCCceECCCCCeEcHHHccCCCCcCCCCccccCCC
Confidence 5799999999999999999999999999999999 8998888965 999999999999999999999999999999986
No 20
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.77 E-value=6.7e-17 Score=186.35 Aligned_cols=228 Identities=17% Similarity=0.331 Sum_probs=170.6
Q ss_pred CeEEEEeccCCceE------ecccccCCcceEEEeCCcceEEEecCCCcCeEEEEecCCCCcEEEEeccCCCCCcceEEE
Q psy948 1175 IKLDVAELDGTNRK------TLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTL 1248 (1576)
Q Consensus 1175 ~~I~v~~ldG~~r~------~l~~~l~~P~~iavdP~~g~lywtd~g~~~~I~ra~mdGs~~~~iv~~~~~l~~P~gLai 1248 (1576)
..|.+.+++|...+ ++.....+|.+|++||..++|||+|.+ ..+|.+..++|...+.++. ..+..|.||++
T Consensus 10 ~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~-~~~I~~~~~~g~~~~~~~~--~~~~~p~~ia~ 86 (267)
T 1npe_A 10 GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDIS-EPSIGRASLHGGEPTTIIR--QDLGSPEGIAL 86 (267)
T ss_dssp EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETT-TTEEEEEESSSCCCEEEEC--TTCCCEEEEEE
T ss_pred CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECC-CCEEEEEecCCCCcEEEEE--CCCCCccEEEE
Confidence 36777788876543 222335679999999999999999985 4689999999988766653 45789999999
Q ss_pred eccCCeEEEEcCCCCeEEEEeCCCCceEEEEeCCCccceeEEeeeCCeEEEeccCCCcceeeccccccccccceeccccc
Q psy948 1249 DYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLFEDHIYWTDWNTKSINRADKFNAREIQAGILHHCMN 1328 (1576)
Q Consensus 1249 D~~~~rlYw~D~~~~~I~s~~~dG~~r~~v~~~~~~~~P~~lavfed~lYwtd~~~~~i~~~~k~~~~~~~~~~~~~c~n 1328 (1576)
|..+++|||+|...+.|..++++|+.+++++..
T Consensus 87 d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~----------------------------------------------- 119 (267)
T 1npe_A 87 DHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDT----------------------------------------------- 119 (267)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEECS-----------------------------------------------
T ss_pred EecCCeEEEEECCCCEEEEEEcCCCCEEEEEEC-----------------------------------------------
Confidence 999999999998888777766665433221100
Q ss_pred ccCCCcceeeccCCceeccCCCccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceeccCCceEEEEec
Q psy948 1329 ITGGSGYLCTCYQGFIIDKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKANDNKLTIVYSN 1408 (1576)
Q Consensus 1329 ~~g~~~~~C~C~~G~~~~~~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~~~~~~ll~s~ 1408 (1576)
T Consensus 120 -------------------------------------------------------------------------------- 119 (267)
T 1npe_A 120 -------------------------------------------------------------------------------- 119 (267)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCceeeeccccccccccccccccceeeecccCCcEEEEeecc--cceeEEEeecccccceeeecccceeeeeccCCccee
Q psy948 1409 GPEIRAYETHKRRFRDVISDERRIEALDIDPVDEIIYWVDSY--DRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAI 1486 (1576)
Q Consensus 1409 ~~~Ir~i~~~~~~~~~~v~~~~~i~ald~D~~~~~vYWsD~~--~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~gl 1486 (1576)
....+.+|++|+..++|||++.. .++|+++.+++.....+. ...+..|.||
T Consensus 120 -------------------~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~--------~~~~~~P~gi 172 (267)
T 1npe_A 120 -------------------GLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILA--------QDNLGLPNGL 172 (267)
T ss_dssp -------------------SCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEE--------CTTCSCEEEE
T ss_pred -------------------CCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEE--------ECCCCCCcEE
Confidence 00123466778878889999876 568888877764432221 1235689999
Q ss_pred eecCCCCeEEEeecCCCCCCCCCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEecCCCCcEEEeecC-CCCc
Q psy948 1487 AVDWIAHNIYWTVSDRSGSKPKGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAETGASPRIESAWMD-GSHR 1565 (1576)
Q Consensus 1487 AVDwv~~nLYWTD~~~~~~~~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~mD-Gs~r 1565 (1576)
|||...++|||++.. .++|.+.+++|..+++++. .+..|.+|++| .++|||++++.+ +|.+.+++ |+..
T Consensus 173 a~d~~~~~lyv~d~~------~~~I~~~~~~g~~~~~~~~-~~~~P~gi~~d--~~~lyva~~~~~-~v~~~d~~~g~~~ 242 (267)
T 1npe_A 173 TFDAFSSQLCWVDAG------THRAECLNPAQPGRRKVLE-GLQYPFAVTSY--GKNLYYTDWKTN-SVIAMDLAISKEM 242 (267)
T ss_dssp EEETTTTEEEEEETT------TTEEEEEETTEEEEEEEEE-CCCSEEEEEEE--TTEEEEEETTTT-EEEEEETTTTEEE
T ss_pred EEcCCCCEEEEEECC------CCEEEEEecCCCceEEEec-CCCCceEEEEe--CCEEEEEECCCC-eEEEEeCCCCCce
Confidence 999989999999986 5899999999987777764 68899999998 589999999865 89999997 5544
Q ss_pred EEEE
Q psy948 1566 SATQ 1569 (1576)
Q Consensus 1566 ~~i~ 1569 (1576)
.+|-
T Consensus 243 ~~i~ 246 (267)
T 1npe_A 243 DTFH 246 (267)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 4443
No 21
>2fcw_B LDL receptor, low-density lipoprotein receptor; protein-protein complex, RAP, escort protein, calcium- binding; 1.26A {Homo sapiens} SCOP: g.12.1.1 g.12.1.1 PDB: 2kri_B
Probab=99.76 E-value=2.8e-19 Score=164.21 Aligned_cols=76 Identities=50% Similarity=1.097 Sum_probs=72.1
Q ss_pred CCCCCceecCCCeEEeCcccCCCCCCCCCCCCCCCcccccccCCceecCCCceecceeccCCCCCCCCCCCC--CCCC
Q psy948 548 QCSESEFQCKNGKCIPAQWRCDHDEDCTDGSDEMECGGFQCKNGTFQCSSGHCIAAYFRCDGDRDCRDLSDE--MNCP 623 (1576)
Q Consensus 548 ~C~~~~f~C~~g~Ci~~~~~CDg~~DC~dgsDE~~C~~~~C~~~~f~C~~g~Ci~~~~~Cdg~~dC~d~sDE--~~C~ 623 (1576)
+|++.+|+|.+|+|||..|+|||+.||.|||||.+|....|.+.+|+|.+|+||+..|+|||+.||.||||| .+|.
T Consensus 2 ~C~~~~F~C~~g~CI~~~~~CDg~~DC~DgSDE~~C~~~~C~~~~f~C~~g~Ci~~~~~CDg~~DC~dgsDE~~~~C~ 79 (80)
T 2fcw_B 2 TCSQAEFRCHDGKCISRQFVCDSDRDCLDGSDEASCPVLTCGPASFQCNSSTCIPQLWACDNDPDCEDGSDEWPQRCR 79 (80)
T ss_dssp CCCTTEEECTTSCEEEGGGTTSSSCCSTTCTTTTTHHHHHCCTTEEECTTSCEEEGGGTTSSSCCSTTCGGGCGGGC-
T ss_pred CCCCCccCCCCCCEEeeecccCCcccCCCcccccccccccCCceeeECCCCCEEecccccCCCcCCCCCCCcCcccCC
Confidence 588999999999999999999999999999999999877899999999999999999999999999999999 6664
No 22
>2fyj_A Low-density lipoprotein receptor-related protein 1; double module, complement type repeat, calcium, beta-2 hairpin, loop-structures; NMR {Homo sapiens} PDB: 2fyl_B
Probab=99.71 E-value=1e-17 Score=155.05 Aligned_cols=77 Identities=43% Similarity=0.959 Sum_probs=70.8
Q ss_pred CCCCCceeecCCCCceecCcccCCCCCCCCCCCCCCCCCCCCCCCC-CeEeeCCCCeecCCCCCCCcCCCCCCCCccCCC
Q psy948 298 NCTQGQHHCGGHDQKCIPWFWKCDGERDCGDGSDEPMSCPARQCRA-GSFQCDNGNCTPSASICDGVDDCRDGSDEKHCD 376 (1576)
Q Consensus 298 ~C~~~~~~C~~~~~~Ci~~~~~Cdg~~dC~dgsDE~~~c~~~~C~~-~~f~C~~g~Ci~~~~~CDg~~dC~dgsDE~~C~ 376 (1576)
.|.+++|+|. +++|||..|+|||+.||+|||||...|+...|.+ ++|+|.+|+||+..|+|||+.||.|||||.+|.
T Consensus 4 ~C~~~~f~C~--~g~Ci~~~~~CDg~~DC~DgsDE~~~C~~~~C~~~~~f~C~~g~CI~~~~~CDG~~DC~DgSDE~~C~ 81 (82)
T 2fyj_A 4 TCPPNQFSCA--SGRCIPISWTCDLDDDCGDRSDESASCAYPTCFPLTQFTCNNGRCININWRCDNDNDCGDNSDEAGCS 81 (82)
T ss_dssp SSCTTEEETT--SSCEEETTSSSSCSSSSCSTTTTTSSCCCSSSCSSSEEECTTSCEEETTCBSSSSBCCSSSSSCSCCC
T ss_pred CCCCCceEeC--CCCEEeccccCCCcccCCCccccccccccccCCCCCceECCCCCeEcHHHccCCCCcCCCCccccCCC
Confidence 4888999997 6899999999999999999999954788778965 999999999999999999999999999999874
No 23
>2fcw_B LDL receptor, low-density lipoprotein receptor; protein-protein complex, RAP, escort protein, calcium- binding; 1.26A {Homo sapiens} SCOP: g.12.1.1 g.12.1.1 PDB: 2kri_B
Probab=99.69 E-value=4.3e-18 Score=156.31 Aligned_cols=76 Identities=43% Similarity=1.082 Sum_probs=70.2
Q ss_pred CCCCCeEeeCCCCeecCCCCCCCcCCCCCCCCccCCCC-CCCCCceecCCCCeeecCCCCCCCCCCCCCCCCCCCCCC
Q psy948 340 QCRAGSFQCDNGNCTPSASICDGVDDCRDGSDEKHCDL-PCPDLEFKCASNGRCILNSWKCDGEPDCKDGSDEDPAMC 416 (1576)
Q Consensus 340 ~C~~~~f~C~~g~Ci~~~~~CDg~~dC~dgsDE~~C~~-~C~~~~f~C~~~~~Ci~~~~~Cdg~~dC~dgsDE~~~~C 416 (1576)
.|++++|+|.+|+||+.+|+|||+.||.|||||.+|.. +|.+.+|+|. +++|||..|+|||+.||.|||||.+..|
T Consensus 2 ~C~~~~F~C~~g~CI~~~~~CDg~~DC~DgSDE~~C~~~~C~~~~f~C~-~g~Ci~~~~~CDg~~DC~dgsDE~~~~C 78 (80)
T 2fcw_B 2 TCSQAEFRCHDGKCISRQFVCDSDRDCLDGSDEASCPVLTCGPASFQCN-SSTCIPQLWACDNDPDCEDGSDEWPQRC 78 (80)
T ss_dssp CCCTTEEECTTSCEEEGGGTTSSSCCSTTCTTTTTHHHHHCCTTEEECT-TSCEEEGGGTTSSSCCSTTCGGGCGGGC
T ss_pred CCCCCccCCCCCCEEeeecccCCcccCCCcccccccccccCCceeeECC-CCCEEecccccCCCcCCCCCCCcCcccC
Confidence 58899999999999999999999999999999999964 6999999997 6899999999999999999999965455
No 24
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.65 E-value=2.2e-14 Score=168.08 Aligned_cols=250 Identities=14% Similarity=0.181 Sum_probs=177.1
Q ss_pred CCeEEEEeccCCceEecccccCCcceEEEeCCcceEEEecCCC------------cCeEEEEecCCCCcEEEEeccCCCC
Q psy948 1174 SIKLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNL------------QAYIGKIGMDGSNFTRILTHEDDIA 1241 (1576)
Q Consensus 1174 ~~~I~v~~ldG~~r~~l~~~l~~P~~iavdP~~g~lywtd~g~------------~~~I~ra~mdGs~~~~iv~~~~~l~ 1241 (1576)
..+|...+++|+..+.|... .+..| .|..++||++.... ...|.+..+||+.+++|...
T Consensus 36 ~~~ly~~~~dg~~~~~l~~~--~~~~i--~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~----- 106 (302)
T 3s25_A 36 NGRLYAMNIDGSNIHKLSND--TAMYI--NADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPD----- 106 (302)
T ss_dssp TTEEEEEETTSCSCEEEEEE--EEEEE--EECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECS-----
T ss_pred CceEEEEcCCCCCCEEccCC--ceeeE--EEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecC-----
Confidence 46788899999887777543 24444 56789999997653 45899999999998776542
Q ss_pred CcceEEEeccCCeEEEEc---CCCCeEEEEeCCCCceEEEEeCCCccceeEEeeeCCeEEEeccCCCcceeecccccccc
Q psy948 1242 WPNALTLDYFTERLYWAD---AHLDYIASVDLDGKHKHIVISGQKVPHVFALTLFEDHIYWTDWNTKSINRADKFNAREI 1318 (1576)
Q Consensus 1242 ~P~gLaiD~~~~rlYw~D---~~~~~I~s~~~dG~~r~~v~~~~~~~~P~~lavfed~lYwtd~~~~~i~~~~k~~~~~~ 1318 (1576)
.+.++.+..++|||++ .....|.+++++|++++.|..... .| ++..+++|||++.....|.+++.
T Consensus 107 --~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~--~~--~~~~g~~iy~t~~g~~~Iy~~~l------ 174 (302)
T 3s25_A 107 --PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL--FT--CNTSDRYFYYNNPKNGQLYRYDT------ 174 (302)
T ss_dssp --CEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC--CC--SEEETTEEEEECTTTCCEEEEET------
T ss_pred --CccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc--eE--eeEECCEEEEEeCCCceEEEEEC------
Confidence 2446667899999999 677899999999999988876533 23 47789999999764444433221
Q ss_pred ccceecccccccCCCcceeeccCCceeccCCCccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceecc
Q psy948 1319 QAGILHHCMNITGGSGYLCTCYQGFIIDKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKAN 1398 (1576)
Q Consensus 1319 ~~~~~~~c~n~~g~~~~~C~C~~G~~~~~~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~ 1398 (1576)
++..
T Consensus 175 ----------------------------------------------------------------------~g~~------ 178 (302)
T 3s25_A 175 ----------------------------------------------------------------------ASQS------ 178 (302)
T ss_dssp ----------------------------------------------------------------------TTTE------
T ss_pred ----------------------------------------------------------------------CCCC------
Confidence 0000
Q ss_pred CCceEEEEecCCceeeeccccccccccccccccceeeecccCCcEEEEeeccc-ceeEEEeecccccceeeecccceeee
Q psy948 1399 DNKLTIVYSNGPEIRAYETHKRRFRDVISDERRIEALDIDPVDEIIYWVDSYD-RNIRRSFMLEAQKGQVQAGFGQDLGI 1477 (1576)
Q Consensus 1399 ~~~~~ll~s~~~~Ir~i~~~~~~~~~~v~~~~~i~ald~D~~~~~vYWsD~~~-~~I~r~~l~~~~~~~v~~~~~~~~~~ 1477 (1576)
..+++. .. . ..+ +.|..+.|||++... ..|+|+.++|+....+...
T Consensus 179 ---~~~l~~-----------~~---------~-~~~--~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~Lt~~------- 225 (302)
T 3s25_A 179 ---EALFYD-----------CN---------C-YKP--VVLDDTNVYYMDVNRDNAIVHVNINNPNPVVLTEA------- 225 (302)
T ss_dssp ---EEEEEC-----------SC---------E-EEE--EEEETTEEEEEEGGGTTEEEEECSSSCCCEECSCS-------
T ss_pred ---EEEEeC-----------CC---------c-cce--eeecCCEEEEEEcCCCcEEEEEECCCCCeEEEeCC-------
Confidence 001100 00 0 011 237889999998765 5899999998775443210
Q ss_pred eccCCcceeeecCCCCeEEEeecCCCCCCCCCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEecCCCCcEEE
Q psy948 1478 KSIGKLTAIAVDWIAHNIYWTVSDRSGSKPKGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAETGASPRIES 1557 (1576)
Q Consensus 1478 ~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~~~~Ier 1557 (1576)
.+ ..+|+.++.|||+.... ...|+++++||+.+++|.... .. ++.+...+||||||... .|.|
T Consensus 226 -~~-----~~~~~~g~~Iy~~~~~~-----~~~i~~~~~DG~~r~~l~~~~---~~--~i~i~~d~Iy~td~~~~-~i~~ 288 (302)
T 3s25_A 226 -NI-----EHYNVYGSLIFYQRGGD-----NPALCVVKNDGTGFKELAKGE---FC--NINVTSQYVYFTDFVSN-KEYC 288 (302)
T ss_dssp -CE-----EEEEEETTEEEEEECSS-----SCEEEEEETTSCCCEEEEESC---EE--EEEECSSEEEEEETTTC-CEEE
T ss_pred -Cc-----ceEEECCCEEEEEECCC-----CcEEEEEECCCCccEEeeCCc---cc--eEEEeCCEEEEEECCCC-eEEE
Confidence 01 34777799999984321 478999999999999998642 33 55668899999999766 5999
Q ss_pred eecCCCCcEEEEe
Q psy948 1558 AWMDGSHRSATQI 1570 (1576)
Q Consensus 1558 a~mDGs~r~~i~~ 1570 (1576)
+.+||+++++|+.
T Consensus 289 ~~~dGs~~~~l~~ 301 (302)
T 3s25_A 289 TSTQNPDTIKALQ 301 (302)
T ss_dssp EESSSCCSCEECC
T ss_pred EECCCCCceEecC
Confidence 9999999998875
No 25
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.62 E-value=6e-15 Score=169.95 Aligned_cols=160 Identities=26% Similarity=0.534 Sum_probs=130.7
Q ss_pred EEEEecCCceeeeccccccccc-----cc-cccccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceee
Q psy948 1403 TIVYSNGPEIRAYETHKRRFRD-----VI-SDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLG 1476 (1576)
Q Consensus 1403 ~ll~s~~~~Ir~i~~~~~~~~~-----~v-~~~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~ 1476 (1576)
+|++++...|+++.+++..... ++ ....++.+|++|+.+++|||+|...++|+++.+++.....+.
T Consensus 3 ~l~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~-------- 74 (267)
T 1npe_A 3 HLLFAQTGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTII-------- 74 (267)
T ss_dssp EEEEEEEEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEE--------
T ss_pred EEEEEcCCeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEE--------
Confidence 5778777889998887654321 22 234678999999999999999999999999988764432211
Q ss_pred eeccCCcceeeecCCCCeEEEeecCCCCCCCCCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEecCC-CCcE
Q psy948 1477 IKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPKGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAETGA-SPRI 1555 (1576)
Q Consensus 1477 ~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~-~~~I 1555 (1576)
...+..|.+|||||.+++|||+|.. .++|.+.+++|+.+++++..++..|++|||||..|+|||++++. ..+|
T Consensus 75 ~~~~~~p~~ia~d~~~~~lyv~d~~------~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I 148 (267)
T 1npe_A 75 RQDLGSPEGIALDHLGRTIFWTDSQ------LDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKI 148 (267)
T ss_dssp CTTCCCEEEEEEETTTTEEEEEETT------TTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEE
T ss_pred ECCCCCccEEEEEecCCeEEEEECC------CCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEE
Confidence 1235689999999999999999985 57999999999988888877889999999999999999999874 5699
Q ss_pred EEeecCCCCcEEEEecCCCCC
Q psy948 1556 ESAWMDGSHRSATQISNRQAP 1576 (1576)
Q Consensus 1556 era~mDGs~r~~i~~~~~~~P 1576 (1576)
++..+||+.++++....+.+|
T Consensus 149 ~~~~~dg~~~~~~~~~~~~~P 169 (267)
T 1npe_A 149 ETSHMDGTNRRILAQDNLGLP 169 (267)
T ss_dssp EEEETTSCCCEEEECTTCSCE
T ss_pred EEEecCCCCcEEEEECCCCCC
Confidence 999999999988887666665
No 26
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.57 E-value=2.2e-13 Score=168.31 Aligned_cols=252 Identities=12% Similarity=0.127 Sum_probs=176.7
Q ss_pred cccCCcceEEEeC-CcceEEEecCCCcCeEEEEecCCCCcEEEEeccCCCCCcceEEEeccCCeEEEEcCCCC----eEE
Q psy948 1192 TAIQDPRGITLHP-GIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLD----YIA 1266 (1576)
Q Consensus 1192 ~~l~~P~~iavdP-~~g~lywtd~g~~~~I~ra~mdGs~~~~iv~~~~~l~~P~gLaiD~~~~rlYw~D~~~~----~I~ 1266 (1576)
..+..|.+||++| ..|.||++|.+ .+|.+..+++...+.++. .+..|.+|++|...++|||+|.... .+.
T Consensus 134 ~~~~~P~~lavdp~~~g~Lyv~d~~--~~I~~id~~~~~v~~~~~---~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~ 208 (430)
T 3tc9_A 134 GGFGGAVWLSFDPKNHNHLYLVGEQ--HPTRLIDFEKEYVSTVYS---GLSKVRTICWTHEADSMIITNDQNNNDRPNNY 208 (430)
T ss_dssp BCCSCCCEEEEETTEEEEEEEEEBT--EEEEEEETTTTEEEEEEC---CCSCEEEEEECTTSSEEEEEECCSCTTSEEEE
T ss_pred cCCCCCCEEEECCCCCCeEEEEeCC--CcEEEEECCCCEEEEEec---CCCCcceEEEeCCCCEEEEEeCCCCcccceEE
Confidence 3578999999999 69999999987 789999999876555543 6789999999999899999998433 456
Q ss_pred EEeCCCCce--EEEEeCCCccceeEEeee--CCeEEEeccCCCcceeeccccccccccceecccccccCCCcceeeccCC
Q psy948 1267 SVDLDGKHK--HIVISGQKVPHVFALTLF--EDHIYWTDWNTKSINRADKFNAREIQAGILHHCMNITGGSGYLCTCYQG 1342 (1576)
Q Consensus 1267 s~~~dG~~r--~~v~~~~~~~~P~~lavf--ed~lYwtd~~~~~i~~~~k~~~~~~~~~~~~~c~n~~g~~~~~C~C~~G 1342 (1576)
.+..+|.-. ..+. .+.+|.+|++. +++|||+|+.+..|++++..++.
T Consensus 209 ~~~~~g~~~~~~~l~---~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~-------------------------- 259 (430)
T 3tc9_A 209 ILTRESGFKVITELT---KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQE-------------------------- 259 (430)
T ss_dssp EEEGGGTSCSEEEEE---ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTE--------------------------
T ss_pred EEeCCCceeeeeeec---cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCc--------------------------
Confidence 666677654 3332 37789999986 57999999887766554421100
Q ss_pred ceeccCCCccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceeccCCceEEEEecCCceeeeccccccc
Q psy948 1343 FIIDKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKANDNKLTIVYSNGPEIRAYETHKRRF 1422 (1576)
Q Consensus 1343 ~~~~~~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~~~~~~ll~s~~~~Ir~i~~~~~~~ 1422 (1576)
+ ..++ .+
T Consensus 260 --------------------------------------------~---------------~~~~---------~~----- 266 (430)
T 3tc9_A 260 --------------------------------------------T---------------TPLF---------TI----- 266 (430)
T ss_dssp --------------------------------------------E---------------EEEE---------EC-----
T ss_pred --------------------------------------------E---------------EEEE---------Ec-----
Confidence 0 0000 00
Q ss_pred cccccccccceeeecccCCcEEEEeecccceeEEEeeccccc----ceeeecc-cc------eeeeeccCCcc-eeeecC
Q psy948 1423 RDVISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQK----GQVQAGF-GQ------DLGIKSIGKLT-AIAVDW 1490 (1576)
Q Consensus 1423 ~~~v~~~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~----~~v~~~~-~~------~~~~~~~~~p~-glAVDw 1490 (1576)
.....+.+|++++..++|||+|...+.|++...++... ...+++. +. ......+..|. |||++.
T Consensus 267 ----~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~ 342 (430)
T 3tc9_A 267 ----QDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKN 342 (430)
T ss_dssp ----SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEEC
T ss_pred ----CCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEcc
Confidence 00123557888888888999999999999988775321 1111111 00 00012356798 899963
Q ss_pred -------CCCeEEEeecCCCCCCCCCeEEEEEcCCCceEEEee---------C-------CCCCceEEEEecCCCeEEEE
Q psy948 1491 -------IAHNIYWTVSDRSGSKPKGKVMVAHNDGRYRRSLVS---------E-------NLESPSSIALDPTLGKMFWA 1547 (1576)
Q Consensus 1491 -------v~~nLYWTD~~~~~~~~~~~I~v~~ldG~~~~~lv~---------~-------~l~~P~~IavDp~~G~LYWT 1547 (1576)
..++||++|.+ .++|.+.+.+|....+.-. . .|..|++|||||..|.||.+
T Consensus 343 ~~y~~~D~~g~lyvaD~~------n~~I~~i~~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVa 416 (430)
T 3tc9_A 343 PAYKGSSDEYDFYFCDRE------NHCIRILTPQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIG 416 (430)
T ss_dssp GGGTTSSCCEEEEEEEGG------GTEEEEECTTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEE
T ss_pred ccccccCCCCeEEEEECC------CcEEEEECCCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEE
Confidence 35799999986 5889999988854433321 0 16689999999999999999
Q ss_pred ecCCCCcEEEeecC
Q psy948 1548 ETGASPRIESAWMD 1561 (1576)
Q Consensus 1548 D~g~~~~Iera~mD 1561 (1576)
|.+.+ +|.+..++
T Consensus 417 D~~n~-rIr~i~~e 429 (430)
T 3tc9_A 417 DRENR-RIRKIGYE 429 (430)
T ss_dssp EGGGT-EEEEEEEC
T ss_pred ECCCC-eEEEEccC
Confidence 99866 89888775
No 27
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.56 E-value=1.9e-13 Score=160.12 Aligned_cols=227 Identities=14% Similarity=0.209 Sum_probs=162.5
Q ss_pred CCcceEEEecCCCcCeEEEEecCCCCcEEEEeccCCCCCcceEEEeccCCeEEEEcCCC-------------CeEEEEeC
Q psy948 1204 PGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHL-------------DYIASVDL 1270 (1576)
Q Consensus 1204 P~~g~lywtd~g~~~~I~ra~mdGs~~~~iv~~~~~l~~P~gLaiD~~~~rlYw~D~~~-------------~~I~s~~~ 1270 (1576)
+..++||++.-....+|.++.+||++.+.|... ++.-|. +..+.||++.... ..|..+++
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~~-----~~~~i~--~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~ 95 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNIDGSNIHKLSND-----TAMYIN--ADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKR 95 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEETTSCSCEEEEEE-----EEEEEE--ECSSEEEEEEECC------CCSSCCSEEEEEEET
T ss_pred EeCCEEEEEeCCCCceEEEEcCCCCCCEEccCC-----ceeeEE--EcCCEEEEEECCCCcccccceeccCCCeEEEEeC
Confidence 468899999766668999999999998887653 244454 4589999997653 58999999
Q ss_pred CCCceEEEEeCCCccceeEEeeeCCeEEEecc---CCCcceeeccccccccccceecccccccCCCcceeeccCCceecc
Q psy948 1271 DGKHKHIVISGQKVPHVFALTLFEDHIYWTDW---NTKSINRADKFNAREIQAGILHHCMNITGGSGYLCTCYQGFIIDK 1347 (1576)
Q Consensus 1271 dG~~r~~v~~~~~~~~P~~lavfed~lYwtd~---~~~~i~~~~k~~~~~~~~~~~~~c~n~~g~~~~~C~C~~G~~~~~ 1347 (1576)
+|+.+..+..... ..+++.+++|||++. ....|.+++.
T Consensus 96 dg~~~~~l~~~~~----~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~----------------------------------- 136 (302)
T 3s25_A 96 NGHGSTVLDPDPC----IYASLIGNYIYYLHYDTQTATSLYRIRI----------------------------------- 136 (302)
T ss_dssp TSCCCEEEECSCE----EEEEEETTEEEEEEESSSSCEEEEEEET-----------------------------------
T ss_pred CCCcceEeecCCc----cEEEEeCCEEEEEeecCCCCceEEEEEC-----------------------------------
Confidence 9999888765422 267789999999972 2222221111
Q ss_pred CCCccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceeccCCceEEEEecCCceeeecccccccccccc
Q psy948 1348 NNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKANDNKLTIVYSNGPEIRAYETHKRRFRDVIS 1427 (1576)
Q Consensus 1348 ~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~~~~~~ll~s~~~~Ir~i~~~~~~~~~~v~ 1427 (1576)
++ .....+..
T Consensus 137 -----------------------------------------dG-----------------------------s~~~~lt~ 146 (302)
T 3s25_A 137 -----------------------------------------DG-----------------------------EEKKKIKN 146 (302)
T ss_dssp -----------------------------------------TS-----------------------------CCCEEEES
T ss_pred -----------------------------------------CC-----------------------------CCeEEEeC
Confidence 00 00000110
Q ss_pred ccccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCC
Q psy948 1428 DERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKP 1507 (1576)
Q Consensus 1428 ~~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~ 1507 (1576)
. .+ +++++..+.|||++.....|+++.+++..+..+.. .+..+++.+..+.|||++...
T Consensus 147 ~--~~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~------------~~~~~~~~P~g~~iy~t~~~~----- 205 (302)
T 3s25_A 147 H--YL--FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD------------CNCYKPVVLDDTNVYYMDVNR----- 205 (302)
T ss_dssp S--CC--CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC------------SCEEEEEEEETTEEEEEEGGG-----
T ss_pred C--Cc--eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC------------CCccceeeecCCEEEEEEcCC-----
Confidence 0 01 34578889999999988999999998876544321 233456667899999998742
Q ss_pred CCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEecCCCCcEEEeecCCCCcEEEEecC
Q psy948 1508 KGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAETGASPRIESAWMDGSHRSATQISN 1572 (1576)
Q Consensus 1508 ~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~mDGs~r~~i~~~~ 1572 (1576)
...|+++.|+|+.+++|+...+ ..++|..++|||+..+..++|++++|||++|++|...+
T Consensus 206 ~~~I~~~~ldG~~~~~Lt~~~~-----~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~~r~~l~~~~ 265 (302)
T 3s25_A 206 DNAIVHVNINNPNPVVLTEANI-----EHYNVYGSLIFYQRGGDNPALCVVKNDGTGFKELAKGE 265 (302)
T ss_dssp TTEEEEECSSSCCCEECSCSCE-----EEEEEETTEEEEEECSSSCEEEEEETTSCCCEEEEESC
T ss_pred CcEEEEEECCCCCeEEEeCCCc-----ceEEECCCEEEEEECCCCcEEEEEECCCCccEEeeCCc
Confidence 3689999999999988876544 34788899999986655579999999999999988654
No 28
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.51 E-value=1e-12 Score=162.28 Aligned_cols=252 Identities=11% Similarity=0.068 Sum_probs=167.7
Q ss_pred ccCCcceEEEeC--CcceEEEecCCCcCeEEEEecCCCCcEEEEeccCCCCCcceEEEeccCCeEEEEcCCC----CeEE
Q psy948 1193 AIQDPRGITLHP--GIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHL----DYIA 1266 (1576)
Q Consensus 1193 ~l~~P~~iavdP--~~g~lywtd~g~~~~I~ra~mdGs~~~~iv~~~~~l~~P~gLaiD~~~~rlYw~D~~~----~~I~ 1266 (1576)
.|..|.+||++| ..|.|||+|.. .+|.|..+.+...++++ ..+..|.||++|...+ |||+|... ..+.
T Consensus 137 ~~~~P~gvavd~~s~~g~Lyv~D~~--~~I~~id~~~g~v~~~~---~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~ 210 (433)
T 4hw6_A 137 AFDNIWRMMFDPNSNYDDLYWVGQR--DAFRHVDFVNQYVDIKT---TNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIY 210 (433)
T ss_dssp CCSCCCEEEECTTTTTCEEEEECBT--SCEEEEETTTTEEEEEC---CCCSCEEEEEECTTCC-EEEEECCSCTTSEEEE
T ss_pred ccCCCceEEEccccCCCEEEEEeCC--CCEEEEECCCCEEEEee---cCCCCccEEEECCCCC-EEEEcCCCCcccceEE
Confidence 678999999999 48999999987 78999998544333332 3678899999998877 99999743 2244
Q ss_pred EEeCCCCce-EEEEeCCCccceeEEeee--CCeEEEeccCCCcceeeccccccccccceecccccccCCCcceeeccCCc
Q psy948 1267 SVDLDGKHK-HIVISGQKVPHVFALTLF--EDHIYWTDWNTKSINRADKFNAREIQAGILHHCMNITGGSGYLCTCYQGF 1343 (1576)
Q Consensus 1267 s~~~dG~~r-~~v~~~~~~~~P~~lavf--ed~lYwtd~~~~~i~~~~k~~~~~~~~~~~~~c~n~~g~~~~~C~C~~G~ 1343 (1576)
.+...+... ...+. .+.+|.+|++. +++|||+++.++.|++++..++...
T Consensus 211 ~~~~~~~~~~~~~~~--~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~------------------------- 263 (433)
T 4hw6_A 211 LFTRASGFTERLSLC--NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLT------------------------- 263 (433)
T ss_dssp EECGGGTTCCEEEEE--ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEE-------------------------
T ss_pred EEECCCCeecccccc--ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEE-------------------------
Confidence 444444332 12222 36788888886 5799999987776665543211000
Q ss_pred eeccCCCccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceeccCCceEEEEecCCceeeecccccccc
Q psy948 1344 IIDKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKANDNKLTIVYSNGPEIRAYETHKRRFR 1423 (1576)
Q Consensus 1344 ~~~~~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~~~~~~ll~s~~~~Ir~i~~~~~~~~ 1423 (1576)
..++...
T Consensus 264 -----------------------------------------------------------~~~~~~~-------------- 270 (433)
T 4hw6_A 264 -----------------------------------------------------------EEEVMMD-------------- 270 (433)
T ss_dssp -----------------------------------------------------------EEEEECS--------------
T ss_pred -----------------------------------------------------------EEEeccC--------------
Confidence 0000000
Q ss_pred ccccccccceeeecccCCcEEEEeecccceeEEEeeccccc----ceeeecc-cc------eeeeeccCCcceeee----
Q psy948 1424 DVISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQK----GQVQAGF-GQ------DLGIKSIGKLTAIAV---- 1488 (1576)
Q Consensus 1424 ~~v~~~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~----~~v~~~~-~~------~~~~~~~~~p~glAV---- 1488 (1576)
.......|++++..++|||+|...+.|+++.+++... ..++++. +. ......+..|.||||
T Consensus 271 ----~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~ 346 (433)
T 4hw6_A 271 ----TKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNE 346 (433)
T ss_dssp ----CCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECG
T ss_pred ----CCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccc
Confidence 0001124778888888999999999999887764221 0111111 10 001123668999999
Q ss_pred ----cCCCCeEEEeecCCCCCCCCCeEEEEEcCCCceEEEee----------------CCCCCceEEEEecCCCeEEEEe
Q psy948 1489 ----DWIAHNIYWTVSDRSGSKPKGKVMVAHNDGRYRRSLVS----------------ENLESPSSIALDPTLGKMFWAE 1548 (1576)
Q Consensus 1489 ----Dwv~~nLYWTD~~~~~~~~~~~I~v~~ldG~~~~~lv~----------------~~l~~P~~IavDp~~G~LYWTD 1548 (1576)
|-..++||++|.. .++|.+.+.+|....+.-. ..|..|.+|||||..|.||++|
T Consensus 347 ~y~~dd~~g~lyvaD~~------n~~I~~~~~~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD 420 (433)
T 4hw6_A 347 AYAGEEDEYDFYFCDRD------SHTVRVLTPEGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGD 420 (433)
T ss_dssp GGTTSSCCEEEEEEETT------TTEEEEECTTSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEE
T ss_pred cccccCCCCcEEEEECC------CCEEEEECCCCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEe
Confidence 2367899999986 6899999988854332211 1267899999999999999999
Q ss_pred cCCCCcEEEeecC
Q psy948 1549 TGASPRIESAWMD 1561 (1576)
Q Consensus 1549 ~g~~~~Iera~mD 1561 (1576)
++.+ +|.+..++
T Consensus 421 ~~n~-rIr~i~~e 432 (433)
T 4hw6_A 421 CDNH-RVRKIAPE 432 (433)
T ss_dssp GGGT-EEEEEEEC
T ss_pred CCCC-EEEEEecC
Confidence 9866 88887764
No 29
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.37 E-value=6.1e-11 Score=145.49 Aligned_cols=250 Identities=13% Similarity=0.088 Sum_probs=153.4
Q ss_pred CCCCcceEEEeccCCeEEEEcCCCCeEEEEeCCCCceEEEEeCCCccceeEEeeeCCeEEEeccCCC-cceeeccccccc
Q psy948 1239 DIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLFEDHIYWTDWNTK-SINRADKFNARE 1317 (1576)
Q Consensus 1239 ~l~~P~gLaiD~~~~rlYw~D~~~~~I~s~~~dG~~r~~v~~~~~~~~P~~lavfed~lYwtd~~~~-~i~~~~k~~~~~ 1317 (1576)
.+..|.+|++| .+++|||+|...++|..+++++.....++.....++ .+++-.++.|||++.... .|++++..++..
T Consensus 129 ~~~~P~~la~d-~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 129 KFKYMWGIAAV-GNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA 206 (409)
T ss_dssp CCCCEEEEEEC-STTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC
T ss_pred ccCCceEEEEe-CCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCce
Confidence 57899999999 567899999999999999999877776665543444 445556678999998765 777777644322
Q ss_pred cccceecccccccCCCcceeeccCCceeccCCCccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceec
Q psy948 1318 IQAGILHHCMNITGGSGYLCTCYQGFIIDKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKA 1397 (1576)
Q Consensus 1318 ~~~~~~~~c~n~~g~~~~~C~C~~G~~~~~~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~ 1397 (1576)
... . .. .. . ... .. |.+..+.+.
T Consensus 207 ~~~-~-g~----~~---------~------~~~-------------~~----------------p~~iav~p~------- 229 (409)
T 3hrp_A 207 PTR-I-GQ----LG---------S------TFS-------------GK----------------IGAVALDET------- 229 (409)
T ss_dssp EEE-E-EE----CC---------T------TSC-------------SC----------------CCBCEECTT-------
T ss_pred eEE-e-ee----cc---------c------hhc-------------CC----------------cEEEEEeCC-------
Confidence 110 0 00 00 0 000 00 011111110
Q ss_pred cCCceEEEEecCCceeeecccccccccc----ccc--cccce-eeecccCCcEEEEeecccceeEEEeecccccceeeec
Q psy948 1398 NDNKLTIVYSNGPEIRAYETHKRRFRDV----ISD--ERRIE-ALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAG 1470 (1576)
Q Consensus 1398 ~~~~~~ll~s~~~~Ir~i~~~~~~~~~~----v~~--~~~i~-ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~ 1470 (1576)
...+++ ......|+++.+.......+ ... ..++. +|+|++..+.||++|...++|++...++.. ..+.+
T Consensus 230 -~g~lyv-~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~--~~~~g 305 (409)
T 3hrp_A 230 -EEWLYF-VDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGEC--EWFCG 305 (409)
T ss_dssp -SSEEEE-ECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCCE--EEEEE
T ss_pred -CCeEEE-EECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCCE--EEEEe
Confidence 111122 11112344444332221111 111 11234 899999889999999999999998776531 11111
Q ss_pred ccce-------eeeeccCCcceeeecCCCCeEEEeec-CCCCCCCCCeEEEEE-cCCCceEEEeeC--------------
Q psy948 1471 FGQD-------LGIKSIGKLTAIAVDWIAHNIYWTVS-DRSGSKPKGKVMVAH-NDGRYRRSLVSE-------------- 1527 (1576)
Q Consensus 1471 ~~~~-------~~~~~~~~p~glAVDwv~~nLYWTD~-~~~~~~~~~~I~v~~-ldG~~~~~lv~~-------------- 1527 (1576)
.... .....+..|.|||||.. ++||++|. . .++|.+.+ .+|. ..+++-.
T Consensus 306 ~~~~~g~~dg~~~~~~~~~P~gia~d~d-G~lyvad~~~------~~~I~~~~~~~G~-v~~~~g~~~~~g~~~g~~~~~ 377 (409)
T 3hrp_A 306 SATQKTVQDGLREEALFAQPNGMTVDED-GNFYIVDGFK------GYCLRKLDILDGY-VSTVAGQVDVASQIDGTPLEA 377 (409)
T ss_dssp CTTCCSCBCEEGGGCBCSSEEEEEECTT-CCEEEEETTT------TCEEEEEETTTTE-EEEEEECTTCBSCCCBSTTTC
T ss_pred CCCCCCcCCCcccccEeCCCeEEEEeCC-CCEEEEeCCC------CCEEEEEECCCCE-EEEEeCCCCCCCcCCCChhce
Confidence 1100 00112567999999976 56999998 6 57899999 5554 3444422
Q ss_pred CCCCceEEEEecCCCeEEEEecCCCCcEEEeecC
Q psy948 1528 NLESPSSIALDPTLGKMFWAETGASPRIESAWMD 1561 (1576)
Q Consensus 1528 ~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~mD 1561 (1576)
.+..|.+|||||. |.||++|++.+ +|.|..|+
T Consensus 378 ~~~~P~giavd~~-g~lyVad~~n~-~Ir~i~~e 409 (409)
T 3hrp_A 378 TFNYPYDICYDGE-GGYWIAEAWGK-AIRKYAVE 409 (409)
T ss_dssp CBSSEEEEEECSS-SEEEEEESTTC-EEEEEEEC
T ss_pred EeCCceEEEEcCC-CCEEEEECCCC-eEEEEEeC
Confidence 2688999999998 99999999866 89887764
No 30
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.36 E-value=7.3e-11 Score=145.69 Aligned_cols=270 Identities=13% Similarity=0.115 Sum_probs=183.3
Q ss_pred cccCCcceEEEeC-CcceEEEecCCCcCeEEEEecCCCCcEEEEeccC-CCCCcceEEE-------eccCCeEEEEcCCC
Q psy948 1192 TAIQDPRGITLHP-GIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHED-DIAWPNALTL-------DYFTERLYWADAHL 1262 (1576)
Q Consensus 1192 ~~l~~P~~iavdP-~~g~lywtd~g~~~~I~ra~mdGs~~~~iv~~~~-~l~~P~gLai-------D~~~~rlYw~D~~~ 1262 (1576)
..+..|.+|++|| ..+.||.+++. ...|.+.++.+...++++.... .+..|.+|++ |...++||++|...
T Consensus 136 ~~~~~p~~la~dp~~~~~Lyv~~~~-~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~ 214 (496)
T 3kya_A 136 CGFSDNGRLAFDPLNKDHLYICYDG-HKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYD 214 (496)
T ss_dssp BCCCSEEEEEEETTEEEEEEEEEET-EEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCC
T ss_pred cccCCCCEEEEccCCCCEEEEEECC-CCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCC
Confidence 3467899999999 58999999986 3568889988877777765422 4557999999 98888999999876
Q ss_pred ------CeEEEEeCC--CCce-----EEEEeCCCccceeEEeeeC--CeEEEeccCCCcceeeccc-------ccccccc
Q psy948 1263 ------DYIASVDLD--GKHK-----HIVISGQKVPHVFALTLFE--DHIYWTDWNTKSINRADKF-------NAREIQA 1320 (1576)
Q Consensus 1263 ------~~I~s~~~d--G~~r-----~~v~~~~~~~~P~~lavfe--d~lYwtd~~~~~i~~~~k~-------~~~~~~~ 1320 (1576)
..|..+.-. |.-. .++. .+.+|++|++.. ++||++++....|++++.. ++..-.
T Consensus 215 ~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~---~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~t- 290 (496)
T 3kya_A 215 GKGDESPSVYIIKRNADGTFDDRSDIQLIA---AYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWD- 290 (496)
T ss_dssp TTGGGEEEEEEEECCTTSCCSTTSCEEEEE---EESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCC-
T ss_pred CCcccCceEEEEecCCCCceeecccceeec---cCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeec-
Confidence 235555323 3332 2332 367999999975 7999999999888877743 110000
Q ss_pred ceecccccccCCCcceeeccCCceeccCCCccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceeccCC
Q psy948 1321 GILHHCMNITGGSGYLCTCYQGFIIDKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKANDN 1400 (1576)
Q Consensus 1321 ~~~~~c~n~~g~~~~~C~C~~G~~~~~~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~~~ 1400 (1576)
+ + . + . ..| .
T Consensus 291 ---------p----~--------~--~------~---------------------------~~g------~--------- 299 (496)
T 3kya_A 291 ---------P----I--------V--K------N---------------------------NPN------T--------- 299 (496)
T ss_dssp ---------C----B--------G--G------G---------------------------CTT------T---------
T ss_pred ---------c----c--------c--c------c---------------------------ccc------c---------
Confidence 0 0 0 0 0 000 0
Q ss_pred ceEEEEecCCceeeeccccccccccccccccceeeecccCCcEEEEeecccceeEEEeecccccc----eeeecc-cc--
Q psy948 1401 KLTIVYSNGPEIRAYETHKRRFRDVISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKG----QVQAGF-GQ-- 1473 (1576)
Q Consensus 1401 ~~~ll~s~~~~Ir~i~~~~~~~~~~v~~~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~----~v~~~~-~~-- 1473 (1576)
...++. + .....+..|++++..+.||++|.....|+|+.+++.... .++++. +.
T Consensus 300 -~~~l~~-------~-----------~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G 360 (496)
T 3kya_A 300 -FKQLFT-------I-----------ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSG 360 (496)
T ss_dssp -EEEEEE-------C-----------SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCC
T ss_pred -cceeEe-------c-----------CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCc
Confidence 000000 0 011235678889988889999999999999887764321 122221 10
Q ss_pred ----eeeeeccCCcc-eeeecC------CCCeEEEeecCCCCCCCCCeEEEEEcCCCceEEEeeC---------------
Q psy948 1474 ----DLGIKSIGKLT-AIAVDW------IAHNIYWTVSDRSGSKPKGKVMVAHNDGRYRRSLVSE--------------- 1527 (1576)
Q Consensus 1474 ----~~~~~~~~~p~-glAVDw------v~~nLYWTD~~~~~~~~~~~I~v~~ldG~~~~~lv~~--------------- 1527 (1576)
......+..|. |+++|- ..++||.+|.. .++|.+.+.+|.. .+++-.
T Consensus 361 ~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~------N~rIr~i~~~G~v-~TiaG~g~~~~~~~~~~~G~~ 433 (496)
T 3kya_A 361 YRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRL------NFCVRKVTPEGIV-STYAGRGASTSLADGNQWGTD 433 (496)
T ss_dssp CBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGG------GTEEEEECTTCBE-EEEEESCTTHHHHHSCSCCCC
T ss_pred ccCCcccccccCCCeEEEEEccccccccCCCeEEEEECC------CCEEEEEeCCCCE-EEEecccccccccCccccccC
Confidence 00112467899 889973 56899999986 6899999998854 344321
Q ss_pred --------CCCCceEEEEecCCCeEEEEecCCCCcEEEeecCCCC
Q psy948 1528 --------NLESPSSIALDPTLGKMFWAETGASPRIESAWMDGSH 1564 (1576)
Q Consensus 1528 --------~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~mDGs~ 1564 (1576)
.|..|.+||||+.+|.||.+|.+.+ +|.+..++|..
T Consensus 434 dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~-rIrki~~~~~~ 477 (496)
T 3kya_A 434 DGDLREVARFRDVSGLVYDDVKEMFYVHDQVGH-TIRTISMEQEE 477 (496)
T ss_dssp CEETTTTCCCSSEEEEEEETTTTEEEEEETTTT-EEEEEEECCCC
T ss_pred CCCchhhhhcCCCcEEEEECCCCEEEEEeCCCC-EEEEEECCCCc
Confidence 3678999999998899999999866 99999999874
No 31
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.31 E-value=9.8e-11 Score=139.07 Aligned_cols=259 Identities=10% Similarity=0.061 Sum_probs=164.4
Q ss_pred cccCCcceEEEeCCcceEEEecCCCc-----------------------CeEEEEecC-CCCcEEEEeccCCCCCcceEE
Q psy948 1192 TAIQDPRGITLHPGIGYVYFSSWNLQ-----------------------AYIGKIGMD-GSNFTRILTHEDDIAWPNALT 1247 (1576)
Q Consensus 1192 ~~l~~P~~iavdP~~g~lywtd~g~~-----------------------~~I~ra~md-Gs~~~~iv~~~~~l~~P~gLa 1247 (1576)
..|..|.+||++|. |.||.++.+.. ..|.+.+.+ |.-.+ ......+..|.||+
T Consensus 21 ~~l~~v~~va~d~~-G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~--~~~~~~~~~p~gia 97 (329)
T 3fvz_A 21 LLPGQVSGVALDSK-NNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQ--SSGKNLFYLPHGLS 97 (329)
T ss_dssp CCCSCEEEEEECTT-CCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEE--EECTTTCSSEEEEE
T ss_pred eecCCceEEEECCC-CCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEe--ccCCCccCCceEEE
Confidence 34678889999886 68888877653 257777765 44321 12234567999999
Q ss_pred EeccCCeEEEEcCCCCeEEEEeCCCCc--eEEEEe-------CCCccceeEEeee--CCeEEEecc-CCCcceeeccccc
Q psy948 1248 LDYFTERLYWADAHLDYIASVDLDGKH--KHIVIS-------GQKVPHVFALTLF--EDHIYWTDW-NTKSINRADKFNA 1315 (1576)
Q Consensus 1248 iD~~~~rlYw~D~~~~~I~s~~~dG~~--r~~v~~-------~~~~~~P~~lavf--ed~lYwtd~-~~~~i~~~~k~~~ 1315 (1576)
+|. .++||++|...++|...+.+|.. ...+.. ...+..|.+|++. ++.||++|. ....|.+.+.. +
T Consensus 98 ~d~-~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~-g 175 (329)
T 3fvz_A 98 IDT-DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPS-G 175 (329)
T ss_dssp ECT-TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTT-S
T ss_pred ECC-CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCC-C
Confidence 995 56699999999999999999983 333322 2346789999997 689999996 67666654421 1
Q ss_pred cccccceecccccccCCCcceeeccCCceeccCCCccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCce
Q psy948 1316 REIQAGILHHCMNITGGSGYLCTCYQGFIIDKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVC 1395 (1576)
Q Consensus 1316 ~~~~~~~~~~c~n~~g~~~~~C~C~~G~~~~~~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C 1395 (1576)
..+. ..+ . .+..
T Consensus 176 ~~~~---------~~~-----------------------------------------------------~---~g~~--- 187 (329)
T 3fvz_A 176 KFVT---------QWG-----------------------------------------------------E---ESSG--- 187 (329)
T ss_dssp CEEE---------EEC-----------------------------------------------------E---ECCS---
T ss_pred CEEE---------Eec-----------------------------------------------------c---CCCC---
Confidence 0000 000 0 0000
Q ss_pred eccCCceEEEEecCCceeeeccccccccccccccccceeeecccCCcEEEEeecccceeEEEeec-ccccceeeecccce
Q psy948 1396 KANDNKLTIVYSNGPEIRAYETHKRRFRDVISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFML-EAQKGQVQAGFGQD 1474 (1576)
Q Consensus 1396 ~~~~~~~~ll~s~~~~Ir~i~~~~~~~~~~v~~~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~-~~~~~~v~~~~~~~ 1474 (1576)
. .........+.+|++|+..+.||++|...++|.+..+. +.....+.. .
T Consensus 188 ---~-----------------------~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~-~--- 237 (329)
T 3fvz_A 188 ---S-----------------------SPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKH-A--- 237 (329)
T ss_dssp ---S-----------------------SCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECC-T---
T ss_pred ---C-----------------------CCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEec-c---
Confidence 0 00001123467889998889999999999999888766 321111100 0
Q ss_pred eeeeccCCcceeeecC-----CCCeEEEeecCCCCCCCCCeEEEEEc-CCCceEEEe--eCCCCCceEEEEecCCCeEEE
Q psy948 1475 LGIKSIGKLTAIAVDW-----IAHNIYWTVSDRSGSKPKGKVMVAHN-DGRYRRSLV--SENLESPSSIALDPTLGKMFW 1546 (1576)
Q Consensus 1475 ~~~~~~~~p~glAVDw-----v~~nLYWTD~~~~~~~~~~~I~v~~l-dG~~~~~lv--~~~l~~P~~IavDp~~G~LYW 1546 (1576)
.....|.++++.+ ..+++|.++.. ..+|.+.++ +|+...++- ...+..|.+||++|. |.||.
T Consensus 238 ---~~~~~~~~~~~~pg~~~~~~g~~~v~~~~------~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~d-G~lyv 307 (329)
T 3fvz_A 238 ---SFGRNVFAISYIPGFLFAVNGKPYFGDQE------PVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASED-GTVYI 307 (329)
T ss_dssp ---TTTTCEEEEEEETTEEEEEECCCCTTCSC------CCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTT-SEEEE
T ss_pred ---ccCCCcceeeecCCEEEEeCCCEEeccCC------CcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCC-CCEEE
Confidence 0112344444444 13344444442 467888885 454444432 357889999999985 69999
Q ss_pred EecCCCCcEEEeecCCCC
Q psy948 1547 AETGASPRIESAWMDGSH 1564 (1576)
Q Consensus 1547 TD~g~~~~Iera~mDGs~ 1564 (1576)
++.+.+ +|.+..++|..
T Consensus 308 ad~~~~-~I~~~~~~~~~ 324 (329)
T 3fvz_A 308 GDAHTN-TVWKFTLTEKM 324 (329)
T ss_dssp EESSSC-CEEEEEEEECS
T ss_pred EECCCC-EEEEEeCCccc
Confidence 998866 89999988753
No 32
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=99.23 E-value=3.5e-12 Score=162.11 Aligned_cols=105 Identities=32% Similarity=0.625 Sum_probs=88.3
Q ss_pred cceeecCCCccccCcccccccCCCCCCCccccccccCCCCCCCCCceecCCCeEEeCcccCCCCCCCCCCCCCCCccccc
Q psy948 508 TTDFQCKNNRCIPKRWMCDFENDCGDQSDEAEDLCAGAYRQCSESEFQCKNGKCIPAQWRCDHDEDCTDGSDEMECGGFQ 587 (1576)
Q Consensus 508 ~~~f~C~~~~Ci~~~~~Cdg~~dC~d~sDE~~~~c~~~~~~C~~~~f~C~~g~Ci~~~~~CDg~~DC~dgsDE~~C~~~~ 587 (1576)
...|.|..+.+++..+.||+..+|.+.+++ | |...+|+|.+|+||+..|+|||..||.|+|||.+|..
T Consensus 173 ~sl~~C~~~~~~~~~h~~DagV~C~~~~~~----c------~~~~~~~C~~~~ci~~~~~Cdg~~dC~d~sDE~~C~~-- 240 (565)
T 2xrc_A 173 TSLAECTFTKRRTMGYQDFADVVCYTQKAD----S------PMDDFFQCVNGKYISQMKACDGINDCGDQSDELCCKA-- 240 (565)
T ss_dssp SCGGGSEEECCCCCSSCCCCEEEBCCC-------------------CBCTTSCBCCTTSTTSSSCCSSSSSSSSSBSS--
T ss_pred CchhhcccCcccccccccCCceeccccccC----C------CCcCeeECCCCCccCHHHcCCCcccCCCCcccccccc--
Confidence 356788777788888999999999876543 1 2346699999999999999999999999999999975
Q ss_pred ccCCceecCCCceecceeccCCCCCCCCCCCCCCCCC
Q psy948 588 CKNGTFQCSSGHCIAAYFRCDGDRDCRDLSDEMNCPP 624 (1576)
Q Consensus 588 C~~~~f~C~~g~Ci~~~~~Cdg~~dC~d~sDE~~C~~ 624 (1576)
|+..+|+|.++.||+..++|||..||.|||||.+|..
T Consensus 241 c~~~~~~C~~~~C~~~~~~cdG~~dC~~gsDE~~C~~ 277 (565)
T 2xrc_A 241 CQGKGFHCKSGVCIPSQYQCNGEVDCITGEDEVGCAG 277 (565)
T ss_dssp CSSSCEEETTTEEECGGGTTSSSCCSSSCTTSSSCC-
T ss_pred cCCCceecCCCcccCccccCCCcccCCCCccccCcCC
Confidence 9999999999999999999999999999999998863
No 33
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.21 E-value=3.1e-09 Score=130.29 Aligned_cols=146 Identities=14% Similarity=0.158 Sum_probs=113.5
Q ss_pred cceeEEecCCCeEEEEeccCCceEecccccCCcceEEEeCCcceEEEecCCCcCeEEEEecCCCCcEEEE-eccC-CCCC
Q psy948 1165 IPLCALDVRSIKLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRIL-THED-DIAW 1242 (1576)
Q Consensus 1165 ~~~~avD~~~~~I~v~~ldG~~r~~l~~~l~~P~~iavdP~~g~lywtd~g~~~~I~ra~mdGs~~~~iv-~~~~-~l~~ 1242 (1576)
..+|++|....+|.+.++++...+++......|. |+++|..++|||+++....+|.+...++......+ .... ...+
T Consensus 142 g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~ 220 (409)
T 3hrp_A 142 NTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGK 220 (409)
T ss_dssp TEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSC
T ss_pred CCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCC
Confidence 3488999988999999998777666666677788 99999999999999876668888888776543333 1112 5689
Q ss_pred cceEEEeccCCeEEEEcCCCCeEEEEeCCCCceEEE----EeCCCcccee-EEeee--CCeEEEeccCCCcceeecc
Q psy948 1243 PNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIV----ISGQKVPHVF-ALTLF--EDHIYWTDWNTKSINRADK 1312 (1576)
Q Consensus 1243 P~gLaiD~~~~rlYw~D~~~~~I~s~~~dG~~r~~v----~~~~~~~~P~-~lavf--ed~lYwtd~~~~~i~~~~k 1312 (1576)
|.++++|..+++||+++. ..+|..+++++....++ ..+.....|+ +|++. +++||++|..++.|.+++.
T Consensus 221 p~~iav~p~~g~lyv~d~-~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~ 296 (409)
T 3hrp_A 221 IGAVALDETEEWLYFVDS-NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITP 296 (409)
T ss_dssp CCBCEECTTSSEEEEECT-TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECT
T ss_pred cEEEEEeCCCCeEEEEEC-CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEec
Confidence 999999998999999886 67899999988776555 2222334578 99997 5899999999888877664
No 34
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.20 E-value=1.8e-09 Score=133.23 Aligned_cols=144 Identities=12% Similarity=0.045 Sum_probs=113.3
Q ss_pred cceeEEecCCCeEEEEeccCCceEecccccCCcceEEEeCCcceEEEecCCCc---CeEEEEecCCCCcE-EEEeccCCC
Q psy948 1165 IPLCALDVRSIKLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQ---AYIGKIGMDGSNFT-RILTHEDDI 1240 (1576)
Q Consensus 1165 ~~~~avD~~~~~I~v~~ldG~~r~~l~~~l~~P~~iavdP~~g~lywtd~g~~---~~I~ra~mdGs~~~-~iv~~~~~l 1240 (1576)
..+|++|.. .+|.+.++++...+.+...+..|++||+++...+|||++++.. ..+.....+|.... ..+. .+
T Consensus 150 g~Lyv~d~~-~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~---~~ 225 (430)
T 3tc9_A 150 NHLYLVGEQ-HPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITELT---KG 225 (430)
T ss_dssp EEEEEEEBT-EEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEE---EC
T ss_pred CeEEEEeCC-CcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeeec---cC
Confidence 447778877 7888888888777777778889999999999999999998543 35666677776541 2222 47
Q ss_pred CCcceEEEeccCCeEEEEcCCCCeEEEEeCCCCceEEEEeCCCccceeEEeee--CCeEEEeccCCCcceeecc
Q psy948 1241 AWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLF--EDHIYWTDWNTKSINRADK 1312 (1576)
Q Consensus 1241 ~~P~gLaiD~~~~rlYw~D~~~~~I~s~~~dG~~r~~v~~~~~~~~P~~lavf--ed~lYwtd~~~~~i~~~~k 1312 (1576)
..|.|+++|..+++|||+|...++|.++++++.....+........|.+|++. +++|||++..++.|.+++.
T Consensus 226 ~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~ 299 (430)
T 3tc9_A 226 QNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDY 299 (430)
T ss_dssp SSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeC
Confidence 89999999998999999999999999999998776455443345679999985 4569999999998887764
No 35
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.19 E-value=1.5e-09 Score=133.87 Aligned_cols=143 Identities=13% Similarity=0.030 Sum_probs=103.1
Q ss_pred cceeEEecCCCeEEEEeccCCceEecccccCCcceEEEeCCcceEEEecCCC---cCeEEEEecCCCCc-EEEEeccCCC
Q psy948 1165 IPLCALDVRSIKLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNL---QAYIGKIGMDGSNF-TRILTHEDDI 1240 (1576)
Q Consensus 1165 ~~~~avD~~~~~I~v~~ldG~~r~~l~~~l~~P~~iavdP~~g~lywtd~g~---~~~I~ra~mdGs~~-~~iv~~~~~l 1240 (1576)
..+|++|.. .+|.+.++.+...+++...+..|.+||++|... |||+|++. ...+.+...++... ...+. .+
T Consensus 153 g~Lyv~D~~-~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~---~~ 227 (433)
T 4hw6_A 153 DDLYWVGQR-DAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTERLSLC---NA 227 (433)
T ss_dssp CEEEEECBT-SCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCEEEEE---EC
T ss_pred CEEEEEeCC-CCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeecccccc---cc
Confidence 346666666 677777775444455556788899999999888 99999854 22355555444432 22222 47
Q ss_pred CCcceEEEeccCCeEEEEcCCCCeEEEEeCC-CCceEEEEeCCCccceeEEeee--CCeEEEeccCCCcceeecc
Q psy948 1241 AWPNALTLDYFTERLYWADAHLDYIASVDLD-GKHKHIVISGQKVPHVFALTLF--EDHIYWTDWNTKSINRADK 1312 (1576)
Q Consensus 1241 ~~P~gLaiD~~~~rlYw~D~~~~~I~s~~~d-G~~r~~v~~~~~~~~P~~lavf--ed~lYwtd~~~~~i~~~~k 1312 (1576)
..|+||++|...++|||+|...++|.+++.+ |.-...++.....+.+++|++. +++||++|+.++.|.+++.
T Consensus 228 ~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~ 302 (433)
T 4hw6_A 228 RGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDY 302 (433)
T ss_dssp SSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEB
T ss_pred CCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeC
Confidence 8999999999999999999999999999998 5543444443334566778875 4579999999998887653
No 36
>2gtl_O Extracellular hemoglobin linker L3 subunit; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=99.19 E-value=2.1e-13 Score=146.61 Aligned_cols=128 Identities=22% Similarity=0.310 Sum_probs=96.8
Q ss_pred ccccCCCCCCCccccccccCCCCCCCCCceec--CCCeEEeCcccCCCCCCCCCCCCCCCcccccccCCceecCCCceec
Q psy948 525 CDFENDCGDQSDEAEDLCAGAYRQCSESEFQC--KNGKCIPAQWRCDHDEDCTDGSDEMECGGFQCKNGTFQCSSGHCIA 602 (1576)
Q Consensus 525 Cdg~~dC~d~sDE~~~~c~~~~~~C~~~~f~C--~~g~Ci~~~~~CDg~~DC~dgsDE~~C~~~~C~~~~f~C~~g~Ci~ 602 (1576)
.-+..+|.|++||.+ | ..|++.+|+| .+|+|||.+|+|||..||.|||||.+|+..+|.+.+|+|. +
T Consensus 37 ~~~~~~c~d~sDE~~--C----~~C~~~~F~C~~~~g~CIp~~~~CDG~~DC~DgSDE~~C~~~~C~~~~F~c~-----~ 105 (215)
T 2gtl_O 37 IRKAGSLRHRVEELE--D----PSCDEHEHQCGGDDPQCISKLFVCDGHNDCRNGEDEKDCTLPTKAGDKFIGD-----V 105 (215)
T ss_dssp HHHHHHHHHHHHHHS--C----CSSCTTEEECCSSSCCEEEGGGTTSSSCCSSSCHHHHCCCCSSCTTCEEEEE-----E
T ss_pred hcccccCCcchhhcc--C----CCCCCcceeeCCCCCcCccccccCCCCCcCCCcccccCCCCCCcCCCceeee-----E
Confidence 344568999999987 4 3699999999 7999999999999999999999999999889999999983 2
Q ss_pred ceeccCCCCCCCCCCCCCCCCCCCCCCcCCC--CCceecCCC--CceeccCcCCCCCCCCCCCCcCcccccCCCCccCcc
Q psy948 603 AYFRCDGDRDCRDLSDEMNCPPRYPGGRFCP--EYKFQCAST--HLCVEQSELCDGTDDCGDNSDETSSLCSNMNCTSLH 678 (1576)
Q Consensus 603 ~~~~Cdg~~dC~d~sDE~~C~~~~~~~~~C~--~~~f~C~~~--~~Ci~~~~~Cdg~~dC~d~sDE~~~~c~~~~c~~~~ 678 (1576)
++ ..|.+.+|+..|.. .|. .++|.|... ..||.+.+..+|
T Consensus 106 -----~~-~~C~~~~~~~~c~~------~~s~~~~~~fc~~~~v~~~i~l~~~~~g------------------------ 149 (215)
T 2gtl_O 106 -----CF-DHCTKRRPEHMTLA------FESSSIAAFFTPIADLHVHIEIESETDE------------------------ 149 (215)
T ss_dssp -----EE-ESSCSSCCSEEEEE------EEEEEECTTCTTEEEEEEEEEEECCCSS------------------------
T ss_pred -----CC-CcccCCCCCCceee------eeccccccccCCCCccCeEEEEEeecCC------------------------
Confidence 22 23778888877752 233 467888774 458876543332
Q ss_pred cccCcccccCCCCCCCCCCCCCC
Q psy948 679 KCIPKWLFCDGKDDCRDGSDELP 701 (1576)
Q Consensus 679 ~Ci~~~~~Cdg~~dC~dgsDE~~ 701 (1576)
...+.++.|||..+ +||+|..
T Consensus 150 ~~~~~s~~cDG~yd--~gs~el~ 170 (215)
T 2gtl_O 150 DESEVSMPADGEYS--FADHRLT 170 (215)
T ss_dssp CCCEEEEEEEEEEE--TTTTEEE
T ss_pred CccccceeecCEec--CCcceee
Confidence 12345677888888 5888863
No 37
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.18 E-value=1.8e-09 Score=123.22 Aligned_cols=245 Identities=16% Similarity=0.206 Sum_probs=160.9
Q ss_pred ccccC---CcceEEEeCCcceEEE-ecCCCcCeEEEEecCCCCcEEEEeccCCCCCcceEEEeccCCeEEEEcCCCCeEE
Q psy948 1191 KTAIQ---DPRGITLHPGIGYVYF-SSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIA 1266 (1576)
Q Consensus 1191 ~~~l~---~P~~iavdP~~g~lyw-td~g~~~~I~ra~mdGs~~~~iv~~~~~l~~P~gLaiD~~~~rlYw~D~~~~~I~ 1266 (1576)
.+++. .|.+|+++|. |.||+ ++.. ...|.+...++.....+ ....+..|.+|++|.. ++||+++. ...|.
T Consensus 17 ~~~~~~~~~p~~i~~~~~-g~l~v~~~~~-~~~i~~~~~~~~~~~~~--~~~~~~~p~~i~~~~~-g~l~v~~~-~~~i~ 90 (270)
T 1rwi_B 17 FTGIDFRLSPSGVAVDSA-GNVYVTSEGM-YGRVVKLATGSTGTTVL--PFNGLYQPQGLAVDGA-GTVYVTDF-NNRVV 90 (270)
T ss_dssp CCSCSSCCCEEEEEECTT-CCEEEEECSS-SCEEEEECC-----EEC--CCCSCCSCCCEEECTT-CCEEEEET-TTEEE
T ss_pred cccccccCCccceEECCC-CCEEEEccCC-CCcEEEecCCCcccceE--eeCCcCCcceeEECCC-CCEEEEcC-CCEEE
Confidence 34555 9999999985 56888 7643 45777776655433222 2235678999999974 56999998 78999
Q ss_pred EEeCCCCceEEEEeCCCccceeEEeee-CCeEEEeccCCCcceeeccccccccccceecccccccCCCcceeeccCCcee
Q psy948 1267 SVDLDGKHKHIVISGQKVPHVFALTLF-EDHIYWTDWNTKSINRADKFNAREIQAGILHHCMNITGGSGYLCTCYQGFII 1345 (1576)
Q Consensus 1267 s~~~dG~~r~~v~~~~~~~~P~~lavf-ed~lYwtd~~~~~i~~~~k~~~~~~~~~~~~~c~n~~g~~~~~C~C~~G~~~ 1345 (1576)
.++.+|.....+. ...+..|.+|++. .+.||+++.....|.+++.-+
T Consensus 91 ~~d~~~~~~~~~~-~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~------------------------------- 138 (270)
T 1rwi_B 91 TLAAGSNNQTVLP-FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGS------------------------------- 138 (270)
T ss_dssp EECTTCSCCEECC-CCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTC-------------------------------
T ss_pred EEeCCCceEeeee-cCCcCCCcceEECCCCCEEEEECCCCEEEEEECCC-------------------------------
Confidence 9999887654432 2345678888886 557888876544443321000
Q ss_pred ccCCCccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceeccCCceEEEEecCCceeeecccccccccc
Q psy948 1346 DKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKANDNKLTIVYSNGPEIRAYETHKRRFRDV 1425 (1576)
Q Consensus 1346 ~~~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~~~~~~ll~s~~~~Ir~i~~~~~~~~~~ 1425 (1576)
.. ..+. .
T Consensus 139 ---------------------------------------------~~---------~~~~-------------------~ 145 (270)
T 1rwi_B 139 ---------------------------------------------KT---------QTVL-------------------P 145 (270)
T ss_dssp ---------------------------------------------CS---------CEEC-------------------C
T ss_pred ---------------------------------------------ce---------eEee-------------------c
Confidence 00 0000 0
Q ss_pred ccccccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCC
Q psy948 1426 ISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGS 1505 (1576)
Q Consensus 1426 v~~~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~ 1505 (1576)
......+.+|++++.. +||+++...+.|++....+..... .....+..|.+||+|..+ +||+++..
T Consensus 146 ~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~~~~~~~--------~~~~~~~~p~~i~~d~~g-~l~v~~~~---- 211 (270)
T 1rwi_B 146 FTGLNDPDGVAVDNSG-NVYVTDTDNNRVVKLEAESNNQVV--------LPFTDITAPWGIAVDEAG-TVYVTEHN---- 211 (270)
T ss_dssp CCSCCSCCCEEECTTC-CEEEEEGGGTEEEEECTTTCCEEE--------CCCSSCCSEEEEEECTTC-CEEEEETT----
T ss_pred cccCCCceeEEEeCCC-CEEEEECCCCEEEEEecCCCceEe--------ecccCCCCceEEEECCCC-CEEEEECC----
Confidence 0011234567777644 599998888888887665432111 112234689999999754 99999874
Q ss_pred CCCCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEecCCCCcEEEeecCCCC
Q psy948 1506 KPKGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAETGASPRIESAWMDGSH 1564 (1576)
Q Consensus 1506 ~~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~mDGs~ 1564 (1576)
.++|.+.+++|.....+...++..|.+|+++|. |.||+++.+.+ +|.+..++-..
T Consensus 212 --~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~-g~l~v~~~~~~-~v~~~~~~~~~ 266 (270)
T 1rwi_B 212 --TNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSD-RTVYVADRGND-RVVKLTSLEHH 266 (270)
T ss_dssp --TSCEEEECTTCSCCEECCCCSCSCEEEEEECTT-CCEEEEEGGGT-EEEEECCCGGG
T ss_pred --CCcEEEEcCCCCcceeeccCCCCCceeEEECCC-CCEEEEECCCC-EEEEEcCCCcc
Confidence 468999999988766555466789999999985 78999998755 78888776554
No 38
>2gtl_O Extracellular hemoglobin linker L3 subunit; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=99.16 E-value=7.9e-13 Score=142.19 Aligned_cols=129 Identities=21% Similarity=0.343 Sum_probs=103.5
Q ss_pred CCCcCCCCCCCCCCCCCCCCCcceeec--CCCccccCcccccccCCCCCCCccccccccCCCCCCCCCceecCCCeEEeC
Q psy948 487 GKDDCRDGSDELPQNCPKCHETTDFQC--KNNRCIPKRWMCDFENDCGDQSDEAEDLCAGAYRQCSESEFQCKNGKCIPA 564 (1576)
Q Consensus 487 g~~dC~d~sDE~~~~c~~C~~~~~f~C--~~~~Ci~~~~~Cdg~~dC~d~sDE~~~~c~~~~~~C~~~~f~C~~g~Ci~~ 564 (1576)
+..+|.|+|||. +|+.|. ..+|+| .+|+|||..|+|||.+||+|+|||.+ |. .++|.+.+|+|. +.
T Consensus 39 ~~~~c~d~sDE~--~C~~C~-~~~F~C~~~~g~CIp~~~~CDG~~DC~DgSDE~~--C~--~~~C~~~~F~c~-----~~ 106 (215)
T 2gtl_O 39 KAGSLRHRVEEL--EDPSCD-EHEHQCGGDDPQCISKLFVCDGHNDCRNGEDEKD--CT--LPTKAGDKFIGD-----VC 106 (215)
T ss_dssp HHHHHHHHHHHH--SCCSSC-TTEEECCSSSCCEEEGGGTTSSSCCSSSCHHHHC--CC--CSSCTTCEEEEE-----EE
T ss_pred ccccCCcchhhc--cCCCCC-CcceeeCCCCCcCccccccCCCCCcCCCcccccC--CC--CCCcCCCceeee-----EC
Confidence 345899999997 577887 489999 79999999999999999999999987 64 368999999982 32
Q ss_pred cccCCCCCCCCCCCCCCCccccccc--CCceecCCC---ceec-----------ceeccCCCCCCCCCCCCCCCCCCCCC
Q psy948 565 QWRCDHDEDCTDGSDEMECGGFQCK--NGTFQCSSG---HCIA-----------AYFRCDGDRDCRDLSDEMNCPPRYPG 628 (1576)
Q Consensus 565 ~~~CDg~~DC~dgsDE~~C~~~~C~--~~~f~C~~g---~Ci~-----------~~~~Cdg~~dC~d~sDE~~C~~~~~~ 628 (1576)
+ ..|.+++||..|. ..|. ..+|.|..+ .||. .++.|||+.+ ++|+|..|.+.
T Consensus 107 -----~-~~C~~~~~~~~c~-~~~s~~~~~~fc~~~~v~~~i~l~~~~~g~~~~~s~~cDG~yd--~gs~el~~~pp--- 174 (215)
T 2gtl_O 107 -----F-DHCTKRRPEHMTL-AFESSSIAAFFTPIADLHVHIEIESETDEDESEVSMPADGEYS--FADHRLTIHPP--- 174 (215)
T ss_dssp -----E-ESSCSSCCSEEEE-EEEEEEECTTCTTEEEEEEEEEEECCCSSCCCEEEEEEEEEEE--TTTTEEEECCS---
T ss_pred -----C-CcccCCCCCCcee-eeeccccccccCCCCccCeEEEEEeecCCCccccceeecCEec--CCcceeeecCC---
Confidence 2 2478888998876 3454 467888876 4888 8999999999 69999999542
Q ss_pred CcCCCCCceecCC
Q psy948 629 GRFCPEYKFQCAS 641 (1576)
Q Consensus 629 ~~~C~~~~f~C~~ 641 (1576)
.+...+|+|..
T Consensus 175 --~~~~l~f~C~~ 185 (215)
T 2gtl_O 175 --EEDGLGLVGEF 185 (215)
T ss_dssp --STTTEEEEEEE
T ss_pred --CCCCceeEEEe
Confidence 26778899875
No 39
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.15 E-value=1.1e-08 Score=117.97 Aligned_cols=279 Identities=15% Similarity=0.181 Sum_probs=174.6
Q ss_pred cccCCcceEEEeCCcceEEEecCCCcCeEEEEecCCCCcEEEEeccCCCCCcceEEEeccCCeEEEEcCCCCeEEEEeCC
Q psy948 1192 TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLD 1271 (1576)
Q Consensus 1192 ~~l~~P~~iavdP~~g~lywtd~g~~~~I~ra~mdGs~~~~iv~~~~~l~~P~gLaiD~~~~rlYw~D~~~~~I~s~~~d 1271 (1576)
..+..|++|++++. |.||+++.+ ...|.+.+.+|.- +. +........|.+|++| ..++||+++.....|..++.+
T Consensus 17 ~~~~~p~~i~~d~~-g~l~v~~~~-~~~v~~~~~~~~~-~~-~~~~~~~~~~~~i~~~-~~g~l~v~~~~~~~v~~~d~~ 91 (300)
T 2qc5_A 17 IPDSGPYGITSSED-GKVWFTQHK-ANKISSLDQSGRI-KE-FEVPTPDAKVMCLIVS-SLGDIWFTENGANKIGKLSKK 91 (300)
T ss_dssp STTCCEEEEEECTT-SCEEEEETT-TTEEEEECTTSCE-EE-EECSSTTCCEEEEEEC-TTSCEEEEETTTTEEEEECTT
T ss_pred CCCCCcceeeECCC-CCEEEEcCC-CCeEEEECCCCce-EE-EECCCCCCcceeEEEC-CCCCEEEEecCCCeEEEECCC
Confidence 45678999999986 789988753 3578887777433 22 2223446789999999 567899999988999999988
Q ss_pred CCceEEEEeCCCccceeEEeee-CCeEEEeccCCCcceeeccccccccccceecccccccCCCcceeeccCCceeccCCC
Q psy948 1272 GKHKHIVISGQKVPHVFALTLF-EDHIYWTDWNTKSINRADKFNAREIQAGILHHCMNITGGSGYLCTCYQGFIIDKNNA 1350 (1576)
Q Consensus 1272 G~~r~~v~~~~~~~~P~~lavf-ed~lYwtd~~~~~i~~~~k~~~~~~~~~~~~~c~n~~g~~~~~C~C~~G~~~~~~~~ 1350 (1576)
|.-+...+ ......|.+|++. .+.+|+++.....|.+++.. +...... .... .
T Consensus 92 g~~~~~~~-~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~-------~~~~-----------------~ 145 (300)
T 2qc5_A 92 GGFTEYPL-PQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYD-------LPNK-----------------G 145 (300)
T ss_dssp SCEEEEEC-SSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEE-------CSST-----------------T
T ss_pred CCeEEecC-CCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEcc-------CCCC-----------------C
Confidence 65543322 2234679999987 67899998877777776653 2111000 0000 0
Q ss_pred ccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceeccCCceEEEEecCCceeeecccccccccc--ccc
Q psy948 1351 KKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKANDNKLTIVYSNGPEIRAYETHKRRFRDV--ISD 1428 (1576)
Q Consensus 1351 ~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~~~~~~ll~s~~~~Ir~i~~~~~~~~~~--v~~ 1428 (1576)
.. |.+.... ....+++.......|.++..... +..+ ...
T Consensus 146 -------------~~----------------~~~i~~d---------~~g~l~v~~~~~~~i~~~~~~g~-~~~~~~~~~ 186 (300)
T 2qc5_A 146 -------------SY----------------PAFITLG---------SDNALWFTENQNNSIGRITNTGK-LEEYPLPTN 186 (300)
T ss_dssp -------------CC----------------EEEEEEC---------TTSSEEEEETTTTEEEEECTTCC-EEEEECSST
T ss_pred -------------CC----------------ceeEEEC---------CCCCEEEEecCCCeEEEECCCCc-EEEeeCCCC
Confidence 00 0011110 11122222222334554444211 1111 112
Q ss_pred cccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCCC
Q psy948 1429 ERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPK 1508 (1576)
Q Consensus 1429 ~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~ 1508 (1576)
...+.+|.+|+ .+.||+++...+.|++....+. +.. . ........|.+|++|.. ++||+++.. .
T Consensus 187 ~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~~g~----~~~-~---~~~~~~~~~~~i~~d~~-g~l~v~~~~------~ 250 (300)
T 2qc5_A 187 AAAPVGITSGN-DGALWFVEIMGNKIGRITTTGE----ISE-Y---DIPTPNARPHAITAGKN-SEIWFTEWG------A 250 (300)
T ss_dssp TCCEEEEEECT-TSSEEEEETTTTEEEEECTTCC----EEE-E---ECSSTTCCEEEEEECST-TCEEEEETT------T
T ss_pred CCCcceEEECC-CCCEEEEccCCCEEEEEcCCCc----EEE-E---ECCCCCCCceEEEECCC-CCEEEeccC------C
Confidence 34678888887 4589999988888988765321 111 0 00123567999999975 679999864 4
Q ss_pred CeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEecCCCCcEEEeec
Q psy948 1509 GKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAETGASPRIESAWM 1560 (1576)
Q Consensus 1509 ~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~m 1560 (1576)
+.|.+.+++|+.....+......|.+|++++. |.||+++. . +|.+.+.
T Consensus 251 ~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~--~-~i~~~~p 298 (300)
T 2qc5_A 251 NQIGRITNDNTIQEYQLQTENAEPHGITFGKD-GSVWFALK--C-KIGKLNL 298 (300)
T ss_dssp TEEEEECTTSCEEEEECCSTTCCCCCEEECTT-SCEEEECS--S-EEEEEEE
T ss_pred CeEEEECCCCcEEEEECCccCCccceeEeCCC-CCEEEEcc--C-ceEEeCC
Confidence 78999998877654445556788999999985 88999987 3 7877654
No 40
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=99.07 E-value=6e-11 Score=150.75 Aligned_cols=95 Identities=37% Similarity=0.697 Sum_probs=76.9
Q ss_pred ccCcccccCCCCCCCCCCCCCCCCCCCCCCCccccCCCCeEeccccccCCcCCCCCCCCcchhccccccCCCCCCccccc
Q psy948 680 CIPKWLFCDGKDDCRDGSDELPQNCPKCHETTDFQCKNNRCIPKRWMCDFENDCGDQSDEAEDLCAGAYRQCSESEFQCK 759 (1576)
Q Consensus 680 Ci~~~~~Cdg~~dC~dgsDE~~~~c~~c~~~~~f~C~~~~Ci~~~~~Cdg~~dC~d~sDE~~~~c~~~~~~C~~~~f~C~ 759 (1576)
+++..+.||+..+|.+.+++ |....+|+|.+++|||..|+|||..||+|+|||.+ |. .|++.+|+|.
T Consensus 183 ~~~~~h~~DagV~C~~~~~~-------c~~~~~~~C~~~~ci~~~~~Cdg~~dC~d~sDE~~--C~----~c~~~~~~C~ 249 (565)
T 2xrc_A 183 RRTMGYQDFADVVCYTQKAD-------SPMDDFFQCVNGKYISQMKACDGINDCGDQSDELC--CK----ACQGKGFHCK 249 (565)
T ss_dssp CCCCSSCCCCEEEBCCC----------------CBCTTSCBCCTTSTTSSSCCSSSSSSSSS--BS----SCSSSCEEET
T ss_pred ccccccccCCceeccccccC-------CCCcCeeECCCCCccCHHHcCCCcccCCCCccccc--cc----ccCCCceecC
Confidence 44555678888888877655 22346799999999999999999999999999986 53 3999999999
Q ss_pred CCceecccccCCCCCCCCCCCCCcccCc
Q psy948 760 NGKCIPAQWRCDHDEDCTDGSDEMECGG 787 (1576)
Q Consensus 760 ~g~CI~~~~~CDg~~DC~dgsDE~~C~~ 787 (1576)
++.||+..++|||..||.||+||.+|..
T Consensus 250 ~~~C~~~~~~cdG~~dC~~gsDE~~C~~ 277 (565)
T 2xrc_A 250 SGVCIPSQYQCNGEVDCITGEDEVGCAG 277 (565)
T ss_dssp TTEEECGGGTTSSSCCSSSCTTSSSCC-
T ss_pred CCcccCccccCCCcccCCCCccccCcCC
Confidence 9999999999999999999999998864
No 41
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=99.00 E-value=1.4e-10 Score=115.97 Aligned_cols=59 Identities=37% Similarity=0.836 Sum_probs=49.8
Q ss_pred ccccccCCCcceeeccCCceeccCCCccccCCCCccCCCCccccccccCCCceEEEcCCCcEecC
Q psy948 1325 HCMNITGGSGYLCTCYQGFIIDKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSD 1389 (1576)
Q Consensus 1325 ~c~n~~g~~~~~C~C~~G~~~~~~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d 1389 (1576)
.|.+ .+ +|+|+|++||.+.. ++.|++++||.. +++|.+.|+|++|+|+|.|++||+|..
T Consensus 54 ~C~~-~~--~y~C~C~~Gy~~~~--g~~C~dideC~~-~~~C~~~C~n~~g~y~C~C~~G~~g~~ 112 (118)
T 1dx5_I 54 DCDP-NT--QASCECPEGYILDD--GFICTDIDECEN-GGFCSGVCHNLPGTFECICGPDSALAG 112 (118)
T ss_dssp EECT-TS--TTCEECCTTEEEET--TTEEEECCHHHH-CSSCSSEEEECSSSEEEEECSSSSCEE
T ss_pred cccC-CC--CeEeECCCCccCCC--CCccccccccCC-CCCCcCeEEeCCCCEEEECCCCCccCC
Confidence 4555 23 39999999999864 678999999986 368999999999999999999999864
No 42
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.00 E-value=5.3e-08 Score=114.96 Aligned_cols=276 Identities=13% Similarity=0.136 Sum_probs=162.0
Q ss_pred cccCCcceEEEeCCcceEEEecCCCcCeEEEEecCCCCcEEEEecc-----------------CCCCCcceEEEeccCCe
Q psy948 1192 TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHE-----------------DDIAWPNALTLDYFTER 1254 (1576)
Q Consensus 1192 ~~l~~P~~iavdP~~g~lywtd~g~~~~I~ra~mdGs~~~~iv~~~-----------------~~l~~P~gLaiD~~~~r 1254 (1576)
..+..|.+||++|. |.++|++.. ..+|.+...++...+.+.... .....|.||++|...++
T Consensus 16 g~~~~p~~i~~d~~-g~~l~v~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~ 93 (322)
T 2fp8_A 16 APSYAPNSFTFDST-NKGFYTSVQ-DGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ 93 (322)
T ss_dssp CSSSCCCCEECCTT-CSSEEEECT-TSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE
T ss_pred CccCCceEEEEcCC-CCEEEEEcC-CCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc
Confidence 45788999999996 777788753 467888877765444433211 11357999999987889
Q ss_pred EEEEcCCCCeEEEEeCCCCceEEEEe---CCCccceeEEeeeC--CeEEEeccCCCcceeeccccccccccceecccccc
Q psy948 1255 LYWADAHLDYIASVDLDGKHKHIVIS---GQKVPHVFALTLFE--DHIYWTDWNTKSINRADKFNAREIQAGILHHCMNI 1329 (1576)
Q Consensus 1255 lYw~D~~~~~I~s~~~dG~~r~~v~~---~~~~~~P~~lavfe--d~lYwtd~~~~~i~~~~k~~~~~~~~~~~~~c~n~ 1329 (1576)
||++|... .|..++.++...+++.. +..+..|.+|++.. +.||+++..+.. .... ..
T Consensus 94 l~v~d~~~-~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~--~~~~-----~~---------- 155 (322)
T 2fp8_A 94 LYIVDCYY-HLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLY--DDRG-----VQ---------- 155 (322)
T ss_dssp EEEEETTT-EEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSC--CTTC-----HH----------
T ss_pred EEEEECCC-CEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccc--cccc-----cc----------
Confidence 99999874 47788877554444432 12355688888864 689999865320 0000 00
Q ss_pred cCCCcceeeccCCceeccCCCccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceeccCCceEEEEecC
Q psy948 1330 TGGSGYLCTCYQGFIIDKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKANDNKLTIVYSNG 1409 (1576)
Q Consensus 1330 ~g~~~~~C~C~~G~~~~~~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~~~~~~ll~s~~ 1409 (1576)
+.+.. ... ...++.+....
T Consensus 156 -------------~~~~~-----------------------------------------~~~-------~g~v~~~d~~~ 174 (322)
T 2fp8_A 156 -------------QIMDT-----------------------------------------SDK-------TGRLIKYDPST 174 (322)
T ss_dssp -------------HHHHH-----------------------------------------TCC-------CEEEEEEETTT
T ss_pred -------------eehcc-----------------------------------------cCC-------CceEEEEeCCC
Confidence 00000 000 00001111100
Q ss_pred CceeeeccccccccccccccccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeec
Q psy948 1410 PEIRAYETHKRRFRDVISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVD 1489 (1576)
Q Consensus 1410 ~~Ir~i~~~~~~~~~~v~~~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVD 1489 (1576)
..+ ..+......+.+|++++..+.||+++...+.|++..+.+...... .+.....+ |.||++|
T Consensus 175 ~~~----------~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~------~~~~~~~g-P~gi~~d 237 (322)
T 2fp8_A 175 KET----------TLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTA------EVLVKIPN-PGNIKRN 237 (322)
T ss_dssp TEE----------EEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCE------EEEEECSS-EEEEEEC
T ss_pred CEE----------EEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCcc------ceEEeCCC-CCCeEEC
Confidence 111 111112345677889988889999999999999988775322111 01111123 9999999
Q ss_pred CCCCeEEEeecCCCCC----CCCCeEEEEEcCCCceEEEeeCC---CCCceEEEEecCCCeEEEEecCCCCcEEEeecCC
Q psy948 1490 WIAHNIYWTVSDRSGS----KPKGKVMVAHNDGRYRRSLVSEN---LESPSSIALDPTLGKMFWAETGASPRIESAWMDG 1562 (1576)
Q Consensus 1490 wv~~nLYWTD~~~~~~----~~~~~I~v~~ldG~~~~~lv~~~---l~~P~~IavDp~~G~LYWTD~g~~~~Iera~mDG 1562 (1576)
. .++||.++...... ...+.|.+.+.+|+..+.+-... +..|.+++.+ .|.||.++...+ +|.+..++.
T Consensus 238 ~-~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~--~g~L~v~~~~~~-~i~~~~~~~ 313 (322)
T 2fp8_A 238 A-DGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEH--DGLLYIGTLFHG-SVGILVYDK 313 (322)
T ss_dssp T-TSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEE--TTEEEEECSSCS-EEEEEEC--
T ss_pred C-CCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEEe--CCEEEEeecCCC-ceEEEeccc
Confidence 6 56788887530000 00256888888887665554332 5778888874 799999997644 899999988
Q ss_pred CCcEEEE
Q psy948 1563 SHRSATQ 1569 (1576)
Q Consensus 1563 s~r~~i~ 1569 (1576)
.....|.
T Consensus 314 ~~~~~~~ 320 (322)
T 2fp8_A 314 KGNSFVS 320 (322)
T ss_dssp -------
T ss_pred ccCcccc
Confidence 7765543
No 43
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.99 E-value=8.6e-08 Score=110.53 Aligned_cols=244 Identities=11% Similarity=0.108 Sum_probs=156.9
Q ss_pred cccCCcceEEEeCCcceEEEecCCCcCeEEEEecCCCCcEEEEec---cCCCCCcceEEEeccCCeEEEEcCC-CCeEEE
Q psy948 1192 TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTH---EDDIAWPNALTLDYFTERLYWADAH-LDYIAS 1267 (1576)
Q Consensus 1192 ~~l~~P~~iavdP~~g~lywtd~g~~~~I~ra~mdGs~~~~iv~~---~~~l~~P~gLaiD~~~~rlYw~D~~-~~~I~s 1267 (1576)
..+..|.+||++|. |.||+++.. ..+|.+.+.+|.....+... ...+..|.+|+++...++||+++.. ...|..
T Consensus 27 g~~~~p~~v~~~~~-g~l~v~~~~-~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQ-NDIIVADTN-NHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQI 104 (286)
T ss_dssp TCBSCEEEEEECTT-CCEEEEEGG-GTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEE
T ss_pred CccCCCceEEECCC-CCEEEEECC-CCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEE
Confidence 34678999999986 679998753 45788888887643333211 1235689999998888999999975 788888
Q ss_pred EeCCCCceEEEEeCCCccceeEEeee-CCeEEEeccCCCcceeeccccccccccceecccccccCCCcceeeccCCceec
Q psy948 1268 VDLDGKHKHIVISGQKVPHVFALTLF-EDHIYWTDWNTKSINRADKFNAREIQAGILHHCMNITGGSGYLCTCYQGFIID 1346 (1576)
Q Consensus 1268 ~~~dG~~r~~v~~~~~~~~P~~lavf-ed~lYwtd~~~~~i~~~~k~~~~~~~~~~~~~c~n~~g~~~~~C~C~~G~~~~ 1346 (1576)
.+.+|...+.+ .......|.+|++. .+.+|+++.....|.+.+..
T Consensus 105 ~d~~g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~--------------------------------- 150 (286)
T 1q7f_A 105 YNQYGQFVRKF-GATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN--------------------------------- 150 (286)
T ss_dssp ECTTSCEEEEE-CTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT---------------------------------
T ss_pred ECCCCcEEEEe-cCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC---------------------------------
Confidence 88777655443 22345678888875 44677776544433322210
Q ss_pred cCCCccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceeccCCceEEEEecCCceeeeccccccccccc
Q psy948 1347 KNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKANDNKLTIVYSNGPEIRAYETHKRRFRDVI 1426 (1576)
Q Consensus 1347 ~~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~~~~~~ll~s~~~~Ir~i~~~~~~~~~~v 1426 (1576)
...+..+...
T Consensus 151 --------------------------------------------------------------g~~~~~~~~~-------- 160 (286)
T 1q7f_A 151 --------------------------------------------------------------GNVLHKFGCS-------- 160 (286)
T ss_dssp --------------------------------------------------------------SCEEEEEECT--------
T ss_pred --------------------------------------------------------------CCEEEEeCCC--------
Confidence 0000000000
Q ss_pred cccccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeee-ccCCcceeeecCCCCeEEEeecCCCCC
Q psy948 1427 SDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIK-SIGKLTAIAVDWIAHNIYWTVSDRSGS 1505 (1576)
Q Consensus 1427 ~~~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~-~~~~p~glAVDwv~~nLYWTD~~~~~~ 1505 (1576)
.....+.+|++++. ++||+++...+.|++....+..... +... .+..|.+||+|. .++||.++..
T Consensus 161 ~~~~~p~~i~~~~~-g~l~v~~~~~~~i~~~~~~g~~~~~--------~~~~g~~~~p~~i~~d~-~G~l~v~~~~---- 226 (286)
T 1q7f_A 161 KHLEFPNGVVVNDK-QEIFISDNRAHCVKVFNYEGQYLRQ--------IGGEGITNYPIGVGINS-NGEILIADNH---- 226 (286)
T ss_dssp TTCSSEEEEEECSS-SEEEEEEGGGTEEEEEETTCCEEEE--------ESCTTTSCSEEEEEECT-TCCEEEEECS----
T ss_pred CccCCcEEEEECCC-CCEEEEECCCCEEEEEcCCCCEEEE--------EccCCccCCCcEEEECC-CCCEEEEeCC----
Confidence 01123567777874 5699999888889887654321111 1111 135799999997 4689999874
Q ss_pred CCCC-eEEEEEcCCCceEEEee-CCCCCceEEEEecCCCeEEEEecCCCCcEEEeec
Q psy948 1506 KPKG-KVMVAHNDGRYRRSLVS-ENLESPSSIALDPTLGKMFWAETGASPRIESAWM 1560 (1576)
Q Consensus 1506 ~~~~-~I~v~~ldG~~~~~lv~-~~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~m 1560 (1576)
.+ +|.+.+.+|+..+.+.. .....|.+||++| .|.||.++.. .+|....+
T Consensus 227 --~~~~i~~~~~~g~~~~~~~~~~~~~~~~~i~~~~-~g~l~vs~~~--~~v~v~~~ 278 (286)
T 1q7f_A 227 --NNFNLTIFTQDGQLISALESKVKHAQCFDVALMD-DGSVVLASKD--YRLYIYRY 278 (286)
T ss_dssp --SSCEEEEECTTSCEEEEEEESSCCSCEEEEEEET-TTEEEEEETT--TEEEEEEC
T ss_pred --CCEEEEEECCCCCEEEEEcccCCCCcceeEEECC-CCcEEEECCC--CeEEEEEc
Confidence 34 89999999987666654 3345699999998 6899999753 35544443
No 44
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.99 E-value=3.1e-08 Score=122.39 Aligned_cols=145 Identities=14% Similarity=0.104 Sum_probs=106.2
Q ss_pred cceeEEecCCCeEEEEeccCCceEeccc----ccCCcceEEE-------eCCcceEEEecCCC-----cCeEEEE--ecC
Q psy948 1165 IPLCALDVRSIKLDVAELDGTNRKTLKT----AIQDPRGITL-------HPGIGYVYFSSWNL-----QAYIGKI--GMD 1226 (1576)
Q Consensus 1165 ~~~~avD~~~~~I~v~~ldG~~r~~l~~----~l~~P~~iav-------dP~~g~lywtd~g~-----~~~I~ra--~md 1226 (1576)
..||.++.....|.+.++.+...++|.. .+..|++|++ ++...+||.+++.. ...|.+. ..+
T Consensus 152 ~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~ 231 (496)
T 3kya_A 152 DHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNAD 231 (496)
T ss_dssp EEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTT
T ss_pred CEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCC
Confidence 3467777767778888888877766642 3567999999 99988999999976 2345555 334
Q ss_pred CCCcE----EEEeccCCCCCcceEEEeccCCeEEEEcCCCCeEEEEeCC--------CCc-----------eEEEEeCCC
Q psy948 1227 GSNFT----RILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLD--------GKH-----------KHIVISGQK 1283 (1576)
Q Consensus 1227 Gs~~~----~iv~~~~~l~~P~gLaiD~~~~rlYw~D~~~~~I~s~~~d--------G~~-----------r~~v~~~~~ 1283 (1576)
|.-.. +++. ...+|+||++|..+++||+++.....|.+++++ |.. ...++....
T Consensus 232 G~~~~~~~~~~v~---~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~ 308 (496)
T 3kya_A 232 GTFDDRSDIQLIA---AYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIAD 308 (496)
T ss_dssp SCCSTTSCEEEEE---EESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSS
T ss_pred Cceeecccceeec---cCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCC
Confidence 44421 2332 367999999999999999999999999999997 332 223333333
Q ss_pred ccceeEEeee--CCeEEEeccCCCcceeecc
Q psy948 1284 VPHVFALTLF--EDHIYWTDWNTKSINRADK 1312 (1576)
Q Consensus 1284 ~~~P~~lavf--ed~lYwtd~~~~~i~~~~k 1312 (1576)
...|++|++. +++||++|+.++.|++++.
T Consensus 309 ~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 309 PSWEFQIFIHPTGKYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp SSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred CCCceEEEEcCCCCEEEEEeCCCCEEEEEec
Confidence 5678999986 3469999999999988664
No 45
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.96 E-value=3.6e-07 Score=105.22 Aligned_cols=281 Identities=15% Similarity=0.156 Sum_probs=170.7
Q ss_pred cccCCcceEEEeCCcceEEEecCCCcCeEEEEecCCCCcEEEEeccCCCCCcceEEEeccCCeEEEEcCCCCeEEEEeCC
Q psy948 1192 TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLD 1271 (1576)
Q Consensus 1192 ~~l~~P~~iavdP~~g~lywtd~g~~~~I~ra~mdGs~~~~iv~~~~~l~~P~gLaiD~~~~rlYw~D~~~~~I~s~~~d 1271 (1576)
.....|++|+++|. |.||+++.+ ...|.+.+.+|.- ..+. .......|.+|++|. .++||+++.....|...+.+
T Consensus 12 ~~~~~~~~i~~d~~-g~l~v~~~~-~~~v~~~d~~~~~-~~~~-~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~ 86 (299)
T 2z2n_A 12 NQDTGPYGITVSDK-GKVWITQHK-ANMISCINLDGKI-TEYP-LPTPDAKVMCLTISS-DGEVWFTENAANKIGRITKK 86 (299)
T ss_dssp SSSCCEEEEEECTT-SCEEEEETT-TTEEEEECTTCCE-EEEE-CSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTT
T ss_pred CcCCCccceEECCC-CCEEEEecC-CCcEEEEcCCCCe-EEec-CCcccCceeeEEECC-CCCEEEeCCCCCeEEEECCC
Confidence 44578999999975 678887643 3568887777432 2222 223457899999995 67899999888899999988
Q ss_pred CCceEEEEeCCCccceeEEeee-CCeEEEeccCCCcceeeccccccccccceecccccccCCCcceeeccCCceeccCCC
Q psy948 1272 GKHKHIVISGQKVPHVFALTLF-EDHIYWTDWNTKSINRADKFNAREIQAGILHHCMNITGGSGYLCTCYQGFIIDKNNA 1350 (1576)
Q Consensus 1272 G~~r~~v~~~~~~~~P~~lavf-ed~lYwtd~~~~~i~~~~k~~~~~~~~~~~~~c~n~~g~~~~~C~C~~G~~~~~~~~ 1350 (1576)
|..+...+ ......|.+|++. .+.||+++.....|.+++. ++...... .... .
T Consensus 87 g~~~~~~~-~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~-------~~~~----------~------- 140 (299)
T 2z2n_A 87 GIIKEYTL-PNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYE-------LPNK----------G------- 140 (299)
T ss_dssp SCEEEEEC-SSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEE-------CSST----------T-------
T ss_pred CcEEEEeC-CCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEec-------CCCC----------C-------
Confidence 65433322 2245679999987 4688988877777777765 32211100 0000 0
Q ss_pred ccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceeccCCceEEEEecCCceeeecccccccccc--ccc
Q psy948 1351 KKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKANDNKLTIVYSNGPEIRAYETHKRRFRDV--ISD 1428 (1576)
Q Consensus 1351 ~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~~~~~~ll~s~~~~Ir~i~~~~~~~~~~--v~~ 1428 (1576)
.. |.+.... ....+++.......|..+.. ...+..+ ...
T Consensus 141 -------------~~----------------~~~i~~~---------~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~ 181 (299)
T 2z2n_A 141 -------------SY----------------PSFITLG---------SDNALWFTENQNNAIGRITE-SGDITEFKIPTP 181 (299)
T ss_dssp -------------CC----------------EEEEEEC---------TTSCEEEEETTTTEEEEECT-TCCEEEEECSST
T ss_pred -------------CC----------------CceEEEc---------CCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCC
Confidence 00 0011111 01112221122234444444 1111111 122
Q ss_pred cccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCCC
Q psy948 1429 ERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPK 1508 (1576)
Q Consensus 1429 ~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~ 1508 (1576)
...+.+|.+|+. +.||+++...+.|++....+. +.. . . .......|.+|++|.. ++||+++.. .
T Consensus 182 ~~~~~~i~~~~~-g~l~v~~~~~~~i~~~~~~g~----~~~-~--~-~~~~~~~~~~i~~~~~-g~l~v~~~~------~ 245 (299)
T 2z2n_A 182 ASGPVGITKGND-DALWFVEIIGNKIGRITTSGE----ITE-F--K-IPTPNARPHAITAGAG-IDLWFTEWG------A 245 (299)
T ss_dssp TCCEEEEEECTT-SSEEEEETTTTEEEEECTTCC----EEE-E--E-CSSTTCCEEEEEECST-TCEEEEETT------T
T ss_pred CCcceeEEECCC-CCEEEEccCCceEEEECCCCc----EEE-E--E-CCCCCCCceeEEECCC-CCEEEeccC------C
Confidence 345778888876 569999888888988766221 110 0 0 0113457999999965 679999854 4
Q ss_pred CeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEecCCCCcEEEeecCC
Q psy948 1509 GKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAETGASPRIESAWMDG 1562 (1576)
Q Consensus 1509 ~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~mDG 1562 (1576)
+.|.+.+++|+.+...+......|++|++ ..|.||+++.. ..|.|..++.
T Consensus 246 ~~i~~~d~~g~~~~~~~~~~~~~~~~i~~--~~g~l~v~~~~--~~l~~~~~~~ 295 (299)
T 2z2n_A 246 NKIGRLTSNNIIEEYPIQIKSAEPHGICF--DGETIWFAMEC--DKIGKLTLIK 295 (299)
T ss_dssp TEEEEEETTTEEEEEECSSSSCCEEEEEE--CSSCEEEEETT--TEEEEEEEC-
T ss_pred ceEEEECCCCceEEEeCCCCCCccceEEe--cCCCEEEEecC--CcEEEEEcCc
Confidence 78999999876544434456788999999 67999999752 3677776654
No 46
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.94 E-value=7.5e-08 Score=115.48 Aligned_cols=271 Identities=10% Similarity=0.067 Sum_probs=155.0
Q ss_pred eEecccccCCcceEEEeCCcceEEEecCCCcCeEEEEecCCCCcEEEEec---cCCCCCcceEEEecc---CCeEEEEcC
Q psy948 1187 RKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTH---EDDIAWPNALTLDYF---TERLYWADA 1260 (1576)
Q Consensus 1187 r~~l~~~l~~P~~iavdP~~g~lywtd~g~~~~I~ra~mdGs~~~~iv~~---~~~l~~P~gLaiD~~---~~rlYw~D~ 1260 (1576)
.+++.++|..|++||++|. |.||.++.. .+|.+.. +|.. +.+... ......|.||+++.. +++||+++.
T Consensus 23 ~~~va~~l~~P~~ia~~pd-G~l~V~e~~--g~I~~i~-~g~~-~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~ 97 (352)
T 2ism_A 23 VEEVVGGLEVPWALAFLPD-GGMLIAERP--GRIRLFR-EGRL-STYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRT 97 (352)
T ss_dssp EEEEECCCSCEEEEEECTT-SCEEEEETT--TEEEEEE-TTEE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEE
T ss_pred EEEEECCCCCceEEEEcCC-CeEEEEeCC--CeEEEEE-CCCc-cEeecceEeecCCCCceeEEECCCCCCCCEEEEEEe
Confidence 3455678999999999996 569999865 6788887 7752 333221 134678999999987 789999998
Q ss_pred CC-----CeEEEEeCCCC---ceEEEEe-----CCCccceeEEeee-CCeEEEeccCCCcceeeccccccccccceeccc
Q psy948 1261 HL-----DYIASVDLDGK---HKHIVIS-----GQKVPHVFALTLF-EDHIYWTDWNTKSINRADKFNAREIQAGILHHC 1326 (1576)
Q Consensus 1261 ~~-----~~I~s~~~dG~---~r~~v~~-----~~~~~~P~~lavf-ed~lYwtd~~~~~i~~~~k~~~~~~~~~~~~~c 1326 (1576)
.. ++|.++.+++. ..++++. ......|.+|++- .++||+++......... .
T Consensus 98 ~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~-----~---------- 162 (352)
T 2ism_A 98 VAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELA-----Q---------- 162 (352)
T ss_dssp ECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGG-----G----------
T ss_pred cCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccc-----c----------
Confidence 64 78999988864 3344443 1223456667764 45888886543221000 0
Q ss_pred ccccCCCcceeeccCCceeccCCCccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceeccCCceEEEE
Q psy948 1327 MNITGGSGYLCTCYQGFIIDKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKANDNKLTIVY 1406 (1576)
Q Consensus 1327 ~n~~g~~~~~C~C~~G~~~~~~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~~~~~~ll~ 1406 (1576)
++.. ..|.++..+ ++|-...+ + ++
T Consensus 163 -d~~~--------~~g~I~ri~---------------------------------~dG~~p~~-n----------pf--- 186 (352)
T 2ism_A 163 -DLAS--------LGGKILRLT---------------------------------PEGEPAPG-N----------PF--- 186 (352)
T ss_dssp -CTTC--------SSSEEEEEC---------------------------------TTSSBCTT-C----------TT---
T ss_pred -CCCC--------CceEEEEEc---------------------------------CCCCCCCC-C----------cc---
Confidence 0000 000000000 00000000 0 00
Q ss_pred ecCCceeeeccccccccccccccccceeeecccCCcEEEEeecccce--------eEEEeecccccc-ee------eecc
Q psy948 1407 SNGPEIRAYETHKRRFRDVISDERRIEALDIDPVDEIIYWVDSYDRN--------IRRSFMLEAQKG-QV------QAGF 1471 (1576)
Q Consensus 1407 s~~~~Ir~i~~~~~~~~~~v~~~~~i~ald~D~~~~~vYWsD~~~~~--------I~r~~l~~~~~~-~v------~~~~ 1471 (1576)
... .......+....+++.+|+||+.++.||.++..... |.++. .+.+.+ .. ..+.
T Consensus 187 ~~~--------~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~-~G~nyGwp~~~g~~~~~~~ 257 (352)
T 2ism_A 187 LGR--------RGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIV-PGGNYGWPRVVGRGNDPRY 257 (352)
T ss_dssp TTC--------TTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEEC-TTCBCCTTTCCSCCCCTTS
T ss_pred cCC--------CCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEec-cCCcCCCCcccCCCCCCCC
Confidence 000 000011112245678999999988999999987765 54432 222110 00 0000
Q ss_pred cc-eeeeeccCCcceeeecCCCCeEEEeecCCCCCCCCCeEEEEEcCCCc-------eEEEeeCCCCCceEEEEecCCCe
Q psy948 1472 GQ-DLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPKGKVMVAHNDGRY-------RRSLVSENLESPSSIALDPTLGK 1543 (1576)
Q Consensus 1472 ~~-~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~~~I~v~~ldG~~-------~~~lv~~~l~~P~~IavDp~~G~ 1543 (1576)
.. .+.+.....|.|||+ | .++||.++.. .++|.+..+++.. ...++ ..+.+|++|+++| .|.
T Consensus 258 ~~p~~~~~~~~ap~G~~~-~-~G~l~v~~~~------~~~v~~v~~~~~~~~~~~~~~~~~~-~~~~rp~~v~~~p-dG~ 327 (352)
T 2ism_A 258 RDPLYFWPQGFPPGNLAF-F-RGDLYVAGLR------GQALLRLVLEGERGRWRVLRVETAL-SGFGRLREVQVGP-DGA 327 (352)
T ss_dssp CCCSEECTTCCCEEEEEE-E-TTEEEEEETT------TTEEEEEEEEEETTEEEEEEEEEEE-ESSCCEEEEEECT-TSC
T ss_pred cCCeEecCCCCCCcceEE-E-CCEEEEEECC------CCEEEEEEECCCCcceeecchheec-ccCCCeeEEEECC-CCc
Confidence 00 011122346899999 4 6799999864 5789999887553 23444 4567999999998 489
Q ss_pred EEEEecCCC
Q psy948 1544 MFWAETGAS 1552 (1576)
Q Consensus 1544 LYWTD~g~~ 1552 (1576)
||.++++..
T Consensus 328 lyv~~~~~~ 336 (352)
T 2ism_A 328 LYVTTSNRD 336 (352)
T ss_dssp EEEEECSTT
T ss_pred EEEEEeCCC
Confidence 999998644
No 47
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.94 E-value=1.1e-07 Score=114.05 Aligned_cols=277 Identities=10% Similarity=0.074 Sum_probs=160.8
Q ss_pred EecccccCCcceEEEeCCcceEEEecCCCcCeEEEEecCCCCcEEEEec---cCCCCCcceEEEecc---CCeEEEEcCC
Q psy948 1188 KTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTH---EDDIAWPNALTLDYF---TERLYWADAH 1261 (1576)
Q Consensus 1188 ~~l~~~l~~P~~iavdP~~g~lywtd~g~~~~I~ra~mdGs~~~~iv~~---~~~l~~P~gLaiD~~---~~rlYw~D~~ 1261 (1576)
+++.++|..|++||++|. |.||.++.. .+|.+...+|. +.+... .....-|.||+++.. +++||+++..
T Consensus 22 ~~va~~l~~P~~ia~~pd-G~l~V~e~~--g~I~~~d~~G~--~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~ 96 (354)
T 3a9g_A 22 SEVASDLEVPWSIAPLGG-GRYLVTERP--GRLVLISPSGK--KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASY 96 (354)
T ss_dssp EEEECSCSCEEEEEEEET-TEEEEEETT--TEEEEECSSCE--EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEE
T ss_pred EEEeCCCCCCeEEEEcCC-CeEEEEeCC--CEEEEEeCCCc--eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEec
Confidence 345577999999999994 679999875 68888877776 344321 234567999999987 8999999874
Q ss_pred ---C----CeEEEEeCCCC-----ceEEEEe---CCCccceeEEeee-CCeEEEeccCCCcceeeccccccccccceecc
Q psy948 1262 ---L----DYIASVDLDGK-----HKHIVIS---GQKVPHVFALTLF-EDHIYWTDWNTKSINRADKFNAREIQAGILHH 1325 (1576)
Q Consensus 1262 ---~----~~I~s~~~dG~-----~r~~v~~---~~~~~~P~~lavf-ed~lYwtd~~~~~i~~~~k~~~~~~~~~~~~~ 1325 (1576)
. ++|.++.+++. ..++++. ......|.+|++- .++||++.........+
T Consensus 97 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~--------------- 161 (354)
T 3a9g_A 97 FAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLA--------------- 161 (354)
T ss_dssp ECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGG---------------
T ss_pred cCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccc---------------
Confidence 3 68888888876 2444432 1223345556653 45777775332211000
Q ss_pred cccccCCCcceeeccCCceeccCCCccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceeccCCceEEE
Q psy948 1326 CMNITGGSGYLCTCYQGFIIDKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKANDNKLTIV 1405 (1576)
Q Consensus 1326 c~n~~g~~~~~C~C~~G~~~~~~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~~~~~~ll 1405 (1576)
.+... ..|.++ .+..+.+ . ....++
T Consensus 162 -~d~~~--------~~G~I~----------------------------------------ri~~dG~-~---p~~npf-- 186 (354)
T 3a9g_A 162 -QDLSS--------LAGKIL----------------------------------------RVDEEGR-P---PADNPF-- 186 (354)
T ss_dssp -TCTTC--------CSSEEE----------------------------------------EECTTSC-C---CTTSSS--
T ss_pred -cCCCC--------CCeEEE----------------------------------------EEcCCCC-C---CCCCCC--
Confidence 00000 000000 0000000 0 000000
Q ss_pred EecCCceeeeccccccccccccccccceeeecccCCcEEEEeecccce---eEEEeecccccc-------eeeecccce-
Q psy948 1406 YSNGPEIRAYETHKRRFRDVISDERRIEALDIDPVDEIIYWVDSYDRN---IRRSFMLEAQKG-------QVQAGFGQD- 1474 (1576)
Q Consensus 1406 ~s~~~~Ir~i~~~~~~~~~~v~~~~~i~ald~D~~~~~vYWsD~~~~~---I~r~~l~~~~~~-------~v~~~~~~~- 1474 (1576)
. ....+....+++.+|+||+.++.||.++..... |.++. .+.+.+ ....+....
T Consensus 187 --~------------~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~-~G~nyGwp~~~g~~~~~~~~~p~ 251 (354)
T 3a9g_A 187 --P------------NSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIIL-KGGNYGWPLATGKAGRGEFVDPV 251 (354)
T ss_dssp --T------------TCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEEC-TTCBCCTTTCCSCCCCTTSCCCS
T ss_pred --C------------CCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEec-CCCcCCCCcccCCCCCCCCcCCE
Confidence 0 011122346789999999988999999987754 44432 222110 000000000
Q ss_pred eee-eccCCcceeee-------cCCCCeEEEeecCCCCCCCCCeEEEEEcCCCc----eEEEeeCCCCCceEEEEecCCC
Q psy948 1475 LGI-KSIGKLTAIAV-------DWIAHNIYWTVSDRSGSKPKGKVMVAHNDGRY----RRSLVSENLESPSSIALDPTLG 1542 (1576)
Q Consensus 1475 ~~~-~~~~~p~glAV-------Dwv~~nLYWTD~~~~~~~~~~~I~v~~ldG~~----~~~lv~~~l~~P~~IavDp~~G 1542 (1576)
+.+ .....|.||+| +| .++||.++.. .++|.+..+++.. ...++......|++|+++|. |
T Consensus 252 ~~~~~~~~ap~G~~~y~g~~fp~~-~G~l~v~~~~------~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pD-G 323 (354)
T 3a9g_A 252 IDTGSETWAPSGASFVHGDMFPGL-RGWLLIACLR------GSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDD-G 323 (354)
T ss_dssp EECTTCCCCEEEEEECCSSSCGGG-TTEEEEEETT------TTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTT-S
T ss_pred eecCCCCcCCcceEEECCCCCccc-CCcEEEEEcC------CCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCC-C
Confidence 111 12347999999 65 5689999864 5789999998642 23444444678999999985 8
Q ss_pred eEEEEecCCCC---------cEEEeecCC
Q psy948 1543 KMFWAETGASP---------RIESAWMDG 1562 (1576)
Q Consensus 1543 ~LYWTD~g~~~---------~Iera~mDG 1562 (1576)
.||.+++.... +|.|....|
T Consensus 324 ~lyv~~~~~~G~g~~~~~~g~i~ri~~~g 352 (354)
T 3a9g_A 324 GILISTSNRDGRGSLRAGDDKILKIVSEQ 352 (354)
T ss_dssp CEEEEECTTSSSSCCCTTCSCEEEEEETT
T ss_pred cEEEEEeCCCCCcCCCCCCCEEEEEecCC
Confidence 99999974222 788876654
No 48
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.93 E-value=1.7e-07 Score=109.86 Aligned_cols=240 Identities=12% Similarity=0.052 Sum_probs=148.6
Q ss_pred CCcceEEEeCCcceEEEecCCCcCeEEEEecCCCCcEEEEeccCCCCCcceEEEeccCCeEEEEcCCCC--eEEEEeCCC
Q psy948 1195 QDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLD--YIASVDLDG 1272 (1576)
Q Consensus 1195 ~~P~~iavdP~~g~lywtd~g~~~~I~ra~mdGs~~~~iv~~~~~l~~P~gLaiD~~~~rlYw~D~~~~--~I~s~~~dG 1272 (1576)
..|.+||++| .|.|||+|.. ..+|.+...+|.. ..++. .-..|.||+++.. ++||+++...+ .|..++...
T Consensus 32 ~~pegia~~~-~g~lyv~d~~-~~~I~~~d~~g~~-~~~~~---~~~~p~gia~~~d-G~l~vad~~~~~~~v~~~d~~~ 104 (306)
T 2p4o_A 32 TFLENLASAP-DGTIFVTNHE-VGEIVSITPDGNQ-QIHAT---VEGKVSGLAFTSN-GDLVATGWNADSIPVVSLVKSD 104 (306)
T ss_dssp CCEEEEEECT-TSCEEEEETT-TTEEEEECTTCCE-EEEEE---CSSEEEEEEECTT-SCEEEEEECTTSCEEEEEECTT
T ss_pred CCcceEEECC-CCCEEEEeCC-CCeEEEECCCCce-EEEEe---CCCCceeEEEcCC-CcEEEEeccCCcceEEEEcCCC
Confidence 5799999999 6789999964 4579999998853 23332 2357999999965 56999997644 466666443
Q ss_pred CceEEEEeCCCccceeEEeee-CCeEEEeccCCCcceeeccccccccccceecccccccCCCcceeeccCCceeccCCCc
Q psy948 1273 KHKHIVISGQKVPHVFALTLF-EDHIYWTDWNTKSINRADKFNAREIQAGILHHCMNITGGSGYLCTCYQGFIIDKNNAK 1351 (1576)
Q Consensus 1273 ~~r~~v~~~~~~~~P~~lavf-ed~lYwtd~~~~~i~~~~k~~~~~~~~~~~~~c~n~~g~~~~~C~C~~G~~~~~~~~~ 1351 (1576)
...+.+........|-+++++ ++++|.++..+..|++++..++..
T Consensus 105 g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~---------------------------------- 150 (306)
T 2p4o_A 105 GTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSG---------------------------------- 150 (306)
T ss_dssp SCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEE----------------------------------
T ss_pred CeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcE----------------------------------
Confidence 333344332233445566543 446777776555555444211100
Q ss_pred cccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceeccCCceEEEEecCCceeeecccccccccccccccc
Q psy948 1352 KCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKANDNKLTIVYSNGPEIRAYETHKRRFRDVISDERR 1431 (1576)
Q Consensus 1352 ~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~~~~~~ll~s~~~~Ir~i~~~~~~~~~~v~~~~~ 1431 (1576)
.+..... .+.. .........
T Consensus 151 ---------------------------------------------------~v~~~~~-~~~~--------~~~~~~~~~ 170 (306)
T 2p4o_A 151 ---------------------------------------------------SIWLEHP-MLAR--------SNSESVFPA 170 (306)
T ss_dssp ---------------------------------------------------EEEEECG-GGSC--------SSTTCCSCS
T ss_pred ---------------------------------------------------eEEEECC-cccc--------ccccCCCCc
Confidence 0000000 0000 000011123
Q ss_pred ceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCCCCeE
Q psy948 1432 IEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPKGKV 1511 (1576)
Q Consensus 1432 i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~~~I 1511 (1576)
+.+| ++..+.||+++...++|++..+++. +.+. . .. .+..+..|.|||||. .++||.++.. .++|
T Consensus 171 pngi--s~dg~~lyv~d~~~~~I~~~~~~~~--g~~~--~-~~-~~~~~~~P~gi~vd~-dG~l~va~~~------~~~V 235 (306)
T 2p4o_A 171 ANGL--KRFGNFLYVSNTEKMLLLRIPVDST--DKPG--E-PE-IFVEQTNIDDFAFDV-EGNLYGATHI------YNSV 235 (306)
T ss_dssp EEEE--EEETTEEEEEETTTTEEEEEEBCTT--SCBC--C-CE-EEEESCCCSSEEEBT-TCCEEEECBT------TCCE
T ss_pred CCCc--CcCCCEEEEEeCCCCEEEEEEeCCC--CCCC--c-cE-EEeccCCCCCeEECC-CCCEEEEeCC------CCeE
Confidence 3445 4556799999999999999887642 1110 0 01 112236899999996 4689999875 5789
Q ss_pred EEEEcCCCceEEE-eeCCCCCceEEEEe---cCCCeEEEEecC
Q psy948 1512 MVAHNDGRYRRSL-VSENLESPSSIALD---PTLGKMFWAETG 1550 (1576)
Q Consensus 1512 ~v~~ldG~~~~~l-v~~~l~~P~~IavD---p~~G~LYWTD~g 1550 (1576)
.+.+.+|+...+. +...+..|.+||+. |..++||.|+.+
T Consensus 236 ~~~~~~G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 236 VRIAPDRSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp EEECTTCCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred EEECCCCCEEEEeecccccCCceEEEEecccCCCCEEEEECCC
Confidence 9999988754321 33467899999999 788999999975
No 49
>1ajj_A LR5, low-density lipoprotein receptor; LDL receptor, cysteine-rich module, calcium; 1.70A {Homo sapiens} SCOP: g.12.1.1
Probab=98.91 E-value=4.9e-10 Score=86.82 Aligned_cols=37 Identities=51% Similarity=1.178 Sum_probs=34.8
Q ss_pred CCCCCcccccCCceecccccCCCCCCCCCCCCCcccC
Q psy948 750 QCSESEFQCKNGKCIPAQWRCDHDEDCTDGSDEMECG 786 (1576)
Q Consensus 750 ~C~~~~f~C~~g~CI~~~~~CDg~~DC~dgsDE~~C~ 786 (1576)
+|++.+|+|.+|+|||..|+|||..||.|||||.+|+
T Consensus 1 ~C~~~~f~C~~g~Ci~~~~~CDg~~DC~DgsDE~~C~ 37 (37)
T 1ajj_A 1 PCSAFEFHCLSGECIHSSWRCDGGPDCKDKSDEENCA 37 (37)
T ss_dssp CCCTTCEECTTSCEECGGGTTSSSCCSTTCGGGTTCC
T ss_pred CCCCCceEcCCCCeechhhccCCCCCCCCCccccCCC
Confidence 3788999999999999999999999999999999884
No 50
>2kny_A LRP-1, linker, APO-E; lipoprotein receptor, ligand binding module, COMP repeat, calcium, cell membrane, coated PIT, cytoplasm, DEVE protein; NMR {Homo sapiens}
Probab=98.91 E-value=2.8e-10 Score=104.18 Aligned_cols=64 Identities=30% Similarity=0.615 Sum_probs=55.7
Q ss_pred CCCCCCCceecC-CCeEEeCcccCCCCCCCCCCCCCC---Ccc-cccccCCceecCC--CceecceeccCC
Q psy948 546 YRQCSESEFQCK-NGKCIPAQWRCDHDEDCTDGSDEM---ECG-GFQCKNGTFQCSS--GHCIAAYFRCDG 609 (1576)
Q Consensus 546 ~~~C~~~~f~C~-~g~Ci~~~~~CDg~~DC~dgsDE~---~C~-~~~C~~~~f~C~~--g~Ci~~~~~Cdg 609 (1576)
...|++.+|+|. +|+|||.+|+|||+.||.|||||. +|. ..+|.+.+|+|.+ +.||+.+++...
T Consensus 6 ~~~C~~~~f~C~~~g~CIp~~~~CDg~~DC~DgsDE~~~~~C~~~~~C~~~~f~c~~~~~~ci~~~~~gLr 76 (80)
T 2kny_A 6 GKTCGPSSFSCPGTHVCVPERWLCDGDKDCADGADESIAAGCLYNSTGSGSGSGSTEELRVRLASHLRKLR 76 (80)
T ss_dssp SCCCSSSEEECTTSSCEEEHHHHTTSSCCSSSSTTTSGGGTCSSSSTTTTCSSCHHHHHHHHTTTTTTTTS
T ss_pred CCCCCCCceecCCCCeEcChhhcCCCCCCCCCCCccccccCCCCCcccCcccchhhhHHHHHHHHHHHHHH
Confidence 357999999998 689999999999999999999998 476 3689999999998 789998776543
No 51
>1ajj_A LR5, low-density lipoprotein receptor; LDL receptor, cysteine-rich module, calcium; 1.70A {Homo sapiens} SCOP: g.12.1.1
Probab=98.90 E-value=5.6e-10 Score=86.49 Aligned_cols=36 Identities=53% Similarity=1.212 Sum_probs=30.8
Q ss_pred CCCCceecCCCeEEeCcccCCCCCCCCCCCCCCCcc
Q psy948 549 CSESEFQCKNGKCIPAQWRCDHDEDCTDGSDEMECG 584 (1576)
Q Consensus 549 C~~~~f~C~~g~Ci~~~~~CDg~~DC~dgsDE~~C~ 584 (1576)
|...+|+|.+|+||+.+|+|||+.||.|||||.+|+
T Consensus 2 C~~~~f~C~~g~Ci~~~~~CDg~~DC~DgsDE~~C~ 37 (37)
T 1ajj_A 2 CSAFEFHCLSGECIHSSWRCDGGPDCKDKSDEENCA 37 (37)
T ss_dssp CCTTCEECTTSCEECGGGTTSSSCCSTTCGGGTTCC
T ss_pred CCCCceEcCCCCeechhhccCCCCCCCCCccccCCC
Confidence 677888888888888888898888888888888773
No 52
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.89 E-value=4e-07 Score=104.90 Aligned_cols=243 Identities=12% Similarity=0.143 Sum_probs=151.0
Q ss_pred CCCCcceEEEeccCCeEEEEcCCCCeEEEEeCCCCceEEEEeCCCccceeEEeeeC-CeEEEeccCCCcceeeccccccc
Q psy948 1239 DIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLFE-DHIYWTDWNTKSINRADKFNARE 1317 (1576)
Q Consensus 1239 ~l~~P~gLaiD~~~~rlYw~D~~~~~I~s~~~dG~~r~~v~~~~~~~~P~~lavfe-d~lYwtd~~~~~i~~~~k~~~~~ 1317 (1576)
....|.+|++|.. ++||+++.....|...+.+|.-... ........|.+|++.. +.||+++.....|.+.+.. ++.
T Consensus 18 ~~~~p~~i~~d~~-g~l~v~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~ 94 (300)
T 2qc5_A 18 PDSGPYGITSSED-GKVWFTQHKANKISSLDQSGRIKEF-EVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF 94 (300)
T ss_dssp TTCCEEEEEECTT-SCEEEEETTTTEEEEECTTSCEEEE-ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred CCCCcceeeECCC-CCEEEEcCCCCeEEEECCCCceEEE-ECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe
Confidence 4678999999975 7899999988999999988544332 2233457899999864 6899998877777776654 211
Q ss_pred cccceecccccccCCCcceeeccCCceeccCCCccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceec
Q psy948 1318 IQAGILHHCMNITGGSGYLCTCYQGFIIDKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKA 1397 (1576)
Q Consensus 1318 ~~~~~~~~c~n~~g~~~~~C~C~~G~~~~~~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~ 1397 (1576)
... ..... + . . |.+....
T Consensus 95 ~~~-------~~~~~---------~--------~-------------~----------------~~~i~~~--------- 112 (300)
T 2qc5_A 95 TEY-------PLPQP---------D--------S-------------G----------------PYGITEG--------- 112 (300)
T ss_dssp EEE-------ECSST---------T--------C-------------C----------------EEEEEEC---------
T ss_pred EEe-------cCCCC---------C--------C-------------C----------------CccceEC---------
Confidence 100 00000 0 0 0 0001110
Q ss_pred cCCceEEEEecCCceeeecccccccccc--ccccccceeeecccCCcEEEEeecccceeEEEeecccccceeeeccccee
Q psy948 1398 NDNKLTIVYSNGPEIRAYETHKRRFRDV--ISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDL 1475 (1576)
Q Consensus 1398 ~~~~~~ll~s~~~~Ir~i~~~~~~~~~~--v~~~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~ 1475 (1576)
....+++.......|.++.... .+..+ ......+.+|.+|+.. +||+++...+.|++....+... .+ .
T Consensus 113 ~~g~l~v~~~~~~~i~~~~~~g-~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~i~~~~~~g~~~-~~-~------ 182 (300)
T 2qc5_A 113 LNGDIWFTQLNGDRIGKLTADG-TIYEYDLPNKGSYPAFITLGSDN-ALWFTENQNNSIGRITNTGKLE-EY-P------ 182 (300)
T ss_dssp STTCEEEEETTTTEEEEECTTS-CEEEEECSSTTCCEEEEEECTTS-SEEEEETTTTEEEEECTTCCEE-EE-E------
T ss_pred CCCCEEEEccCCCeEEEECCCC-CEEEccCCCCCCCceeEEECCCC-CEEEEecCCCeEEEECCCCcEE-Ee-e------
Confidence 0111222211233444444331 11111 1123467888888765 4999998888898876532111 11 0
Q ss_pred eeeccCCcceeeecCCCCeEEEeecCCCCCCCCCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEecCCCCcE
Q psy948 1476 GIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPKGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAETGASPRI 1555 (1576)
Q Consensus 1476 ~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~~~~I 1555 (1576)
.......|.+|++|. .++||+++.. .+.|.+.+++|+.....+...+..|.+|++|+. |.||+++.+.+ +|
T Consensus 183 ~~~~~~~~~~i~~d~-~g~l~v~~~~------~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~-g~l~v~~~~~~-~i 253 (300)
T 2qc5_A 183 LPTNAAAPVGITSGN-DGALWFVEIM------GNKIGRITTTGEISEYDIPTPNARPHAITAGKN-SEIWFTEWGAN-QI 253 (300)
T ss_dssp CSSTTCCEEEEEECT-TSSEEEEETT------TTEEEEECTTCCEEEEECSSTTCCEEEEEECST-TCEEEEETTTT-EE
T ss_pred CCCCCCCcceEEECC-CCCEEEEccC------CCEEEEEcCCCcEEEEECCCCCCCceEEEECCC-CCEEEeccCCC-eE
Confidence 012345799999997 5799999874 468999998887665545556789999999986 88999997644 79
Q ss_pred EEeecCCCCc
Q psy948 1556 ESAWMDGSHR 1565 (1576)
Q Consensus 1556 era~mDGs~r 1565 (1576)
.+.+.+|.-+
T Consensus 254 ~~~~~~g~~~ 263 (300)
T 2qc5_A 254 GRITNDNTIQ 263 (300)
T ss_dssp EEECTTSCEE
T ss_pred EEECCCCcEE
Confidence 9988877543
No 53
>1d2l_A Lipoprotein receptor related protein; ligand binding, calcium binding, complement-like repeat, signaling protein; NMR {Homo sapiens} SCOP: g.12.1.1
Probab=98.89 E-value=9.3e-10 Score=88.79 Aligned_cols=39 Identities=46% Similarity=1.009 Sum_probs=35.8
Q ss_pred CCCCCCCceecCCCeEEeCcccCCCCCCCCCCCCCCCcc
Q psy948 546 YRQCSESEFQCKNGKCIPAQWRCDHDEDCTDGSDEMECG 584 (1576)
Q Consensus 546 ~~~C~~~~f~C~~g~Ci~~~~~CDg~~DC~dgsDE~~C~ 584 (1576)
++.|.+.+|+|.+|+|||..|+|||+.||.|||||.+|.
T Consensus 3 ~~~C~~~~F~C~~g~CI~~~~~CDG~~DC~DgSDE~~c~ 41 (45)
T 1d2l_A 3 PPQCQPGEFACANSRCIQERWKCDGDNDCLDNSDEAPAL 41 (45)
T ss_dssp CCBTTBTCEEETTTEEECGGGTTTSSCTTTTCSTTSTTT
T ss_pred CCcCCCCceEcCCCCeEehhhccCCCCCCCCCCCCCCCc
Confidence 467888999999999999999999999999999999873
No 54
>1d2l_A Lipoprotein receptor related protein; ligand binding, calcium binding, complement-like repeat, signaling protein; NMR {Homo sapiens} SCOP: g.12.1.1
Probab=98.87 E-value=9.3e-10 Score=88.77 Aligned_cols=38 Identities=47% Similarity=1.074 Sum_probs=35.9
Q ss_pred cCCCCCCcccccCCceecccccCCCCCCCCCCCCCccc
Q psy948 748 YRQCSESEFQCKNGKCIPAQWRCDHDEDCTDGSDEMEC 785 (1576)
Q Consensus 748 ~~~C~~~~f~C~~g~CI~~~~~CDg~~DC~dgsDE~~C 785 (1576)
+..|++.+|+|.+|+|||..|+|||..||.|||||..|
T Consensus 3 ~~~C~~~~F~C~~g~CI~~~~~CDG~~DC~DgSDE~~c 40 (45)
T 1d2l_A 3 PPQCQPGEFACANSRCIQERWKCDGDNDCLDNSDEAPA 40 (45)
T ss_dssp CCBTTBTCEEETTTEEECGGGTTTSSCTTTTCSTTSTT
T ss_pred CCcCCCCceEcCCCCeEehhhccCCCCCCCCCCCCCCC
Confidence 45799999999999999999999999999999999986
No 55
>3a7q_B Low-density lipoprotein receptor-related protein; signaling protein; HET: NAG; 2.60A {Homo sapiens}
Probab=98.87 E-value=1.1e-09 Score=88.28 Aligned_cols=39 Identities=51% Similarity=1.287 Sum_probs=33.4
Q ss_pred CCCCCCCceecCCCeEEeCcccCCCCCCCCCCCCCCCcc
Q psy948 546 YRQCSESEFQCKNGKCIPAQWRCDHDEDCTDGSDEMECG 584 (1576)
Q Consensus 546 ~~~C~~~~f~C~~g~Ci~~~~~CDg~~DC~dgsDE~~C~ 584 (1576)
...|...+|+|.+|+|||..|+|||+.||.|||||.+|.
T Consensus 5 ~~~C~~~~f~C~~g~CI~~~~~CDg~~DC~DgSDE~~C~ 43 (44)
T 3a7q_B 5 AKECEKDQFQCRNERCIPSVWRCDEDDDCLDHSDEDDCP 43 (44)
T ss_dssp ---CCTTEEECTTSCEEEGGGTTSSSCCSSSSTTTSCC-
T ss_pred CCCCCCCceEcCCCCEeChhhccCCCCCCCCCccccCCC
Confidence 357888999999999999999999999999999999885
No 56
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=98.86 E-value=9e-10 Score=116.83 Aligned_cols=60 Identities=30% Similarity=0.625 Sum_probs=49.8
Q ss_pred cceeeccC--CceeccCCCccccCCCCccCCCCccc-cccccCCCceEEEcCCCcEecCCCCCce
Q psy948 1334 GYLCTCYQ--GFIIDKNNAKKCLDVDECATGIHHCS-QVCTNLNGTYACSCNAGFTLSDGLSGVC 1395 (1576)
Q Consensus 1334 ~~~C~C~~--G~~~~~~~~~~c~d~neC~~~~~~Cs-~lC~n~~gsy~C~Cp~G~~l~d~~~~~C 1395 (1576)
+|+|.|+. ||.+... ...|+++|||+.+++.|. ++|+|++|+|+|.|++||+|..+.+ +|
T Consensus 99 ~y~C~C~~g~G~~~~~~-~~~c~dideC~~~~~~C~~g~C~n~~gsy~C~C~~Gy~g~~d~~-~C 161 (162)
T 1uzk_A 99 EYKILCPGGEGFRPNPI-TVILEDIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTR-VC 161 (162)
T ss_dssp HHHHHCTTCTTEEECTT-TCCEEECCHHHHCGGGGBTSEEEECSSCEEEECCTTCCBCTTTC-BB
T ss_pred CceeECCCCCCcccCCC-CCccCccccccCCCCCcCCCEeEcCCCCEEeeCCCCccCCCCCC-cc
Confidence 49999998 9987642 467899999998778897 4999999999999999999975443 55
No 57
>3a7q_B Low-density lipoprotein receptor-related protein; signaling protein; HET: NAG; 2.60A {Homo sapiens}
Probab=98.85 E-value=9.6e-10 Score=88.64 Aligned_cols=39 Identities=51% Similarity=1.287 Sum_probs=34.4
Q ss_pred cCCCCCCcccccCCceecccccCCCCCCCCCCCCCcccC
Q psy948 748 YRQCSESEFQCKNGKCIPAQWRCDHDEDCTDGSDEMECG 786 (1576)
Q Consensus 748 ~~~C~~~~f~C~~g~CI~~~~~CDg~~DC~dgsDE~~C~ 786 (1576)
...|++.+|+|.+|+|||..|+|||..||.|||||.+|.
T Consensus 5 ~~~C~~~~f~C~~g~CI~~~~~CDg~~DC~DgSDE~~C~ 43 (44)
T 3a7q_B 5 AKECEKDQFQCRNERCIPSVWRCDEDDDCLDHSDEDDCP 43 (44)
T ss_dssp ---CCTTEEECTTSCEEEGGGTTSSSCCSSSSTTTSCC-
T ss_pred CCCCCCCceEcCCCCEeChhhccCCCCCCCCCccccCCC
Confidence 457999999999999999999999999999999999985
No 58
>2kny_A LRP-1, linker, APO-E; lipoprotein receptor, ligand binding module, COMP repeat, calcium, cell membrane, coated PIT, cytoplasm, DEVE protein; NMR {Homo sapiens}
Probab=98.85 E-value=5.8e-10 Score=102.06 Aligned_cols=66 Identities=24% Similarity=0.478 Sum_probs=55.9
Q ss_pred CCCCCCCCCCeEeeC-CCCeecCCCCCCCcCCCCCCCCcc---CCC--CCCCCCceecCCC-CeeecCCCCCC
Q psy948 335 SCPARQCRAGSFQCD-NGNCTPSASICDGVDDCRDGSDEK---HCD--LPCPDLEFKCASN-GRCILNSWKCD 400 (1576)
Q Consensus 335 ~c~~~~C~~~~f~C~-~g~Ci~~~~~CDg~~dC~dgsDE~---~C~--~~C~~~~f~C~~~-~~Ci~~~~~Cd 400 (1576)
.|+...|++++|+|. +|.|||.+|+|||+.||.|||||. +|. .+|.+.+|+|.+. ++||+..+...
T Consensus 3 ~C~~~~C~~~~f~C~~~g~CIp~~~~CDg~~DC~DgsDE~~~~~C~~~~~C~~~~f~c~~~~~~ci~~~~~gL 75 (80)
T 2kny_A 3 KLEGKTCGPSSFSCPGTHVCVPERWLCDGDKDCADGADESIAAGCLYNSTGSGSGSGSTEELRVRLASHLRKL 75 (80)
T ss_dssp SCSSCCCSSSEEECTTSSCEEEHHHHTTSSCCSSSSTTTSGGGTCSSSSTTTTCSSCHHHHHHHHTTTTTTTT
T ss_pred CCCCCCCCCCceecCCCCeEcChhhcCCCCCCCCCCCccccccCCCCCcccCcccchhhhHHHHHHHHHHHHH
Confidence 466778999999997 689999999999999999999998 475 5799999999732 67998876544
No 59
>1cr8_A Protein (LOW density lipoprotein receptor related protein); ligand binding, calcium binding, LDLR, LRP, lipid binding protein; NMR {Homo sapiens} SCOP: g.12.1.1
Probab=98.85 E-value=1.7e-09 Score=86.27 Aligned_cols=38 Identities=55% Similarity=1.282 Sum_probs=33.5
Q ss_pred CCCCCCceecC-CCeEEeCcccCCCCCCCCCCCCCCCcc
Q psy948 547 RQCSESEFQCK-NGKCIPAQWRCDHDEDCTDGSDEMECG 584 (1576)
Q Consensus 547 ~~C~~~~f~C~-~g~Ci~~~~~CDg~~DC~dgsDE~~C~ 584 (1576)
..|...+|+|. +|+|||..|+|||+.||.|||||.+|.
T Consensus 2 ~~C~~~~F~C~~~g~CI~~~~~CDg~~DC~DgSDE~~C~ 40 (42)
T 1cr8_A 2 GGCHTDEFQCRLDGLCIPLRWRCDGDTDCMDSSDEKSCE 40 (42)
T ss_dssp CCSSTTCEECTTTCCEECGGGSSSSSCCSSSSTTTTTCC
T ss_pred CCCCCCceEeCCCCeEcChhhcCCCCcCCCCCCcccCCC
Confidence 46888999998 489999999999999999999999885
No 60
>2jm4_A Relaxin receptor 1; LDL-A module, RXFP1 receptor, LGR7, signaling protein; NMR {Homo sapiens}
Probab=98.85 E-value=1.9e-09 Score=86.48 Aligned_cols=39 Identities=38% Similarity=0.873 Sum_probs=35.0
Q ss_pred CCCCCCCceecCC-CeEEeCcccCCCCCCCCCCCCCCCcc
Q psy948 546 YRQCSESEFQCKN-GKCIPAQWRCDHDEDCTDGSDEMECG 584 (1576)
Q Consensus 546 ~~~C~~~~f~C~~-g~Ci~~~~~CDg~~DC~dgsDE~~C~ 584 (1576)
...|+..+|+|.+ |+|||..|+|||+.||.|||||.+|.
T Consensus 4 ~~~C~~~~f~C~~~g~CI~~~~~CDg~~DC~DgSDE~~C~ 43 (43)
T 2jm4_A 4 DVKCSLGYFPCGNITKCLPQLLHCNGVDDCGNQADEDNCG 43 (43)
T ss_dssp SCSCCTTEEECSSSSCEEEGGGTTSSCCCSSSCCTTSSCC
T ss_pred CCCCCCCeeECCCCCeEcCHhhccCCCCCCCCCcccCCCC
Confidence 3578889999998 89999999999999999999999884
No 61
>2m0p_A Low-density lipoprotein receptor-related protein; complement type repeat, megalin, LDL receptor FAMI lipid binding protein; NMR {Homo sapiens}
Probab=98.84 E-value=6.4e-10 Score=91.83 Aligned_cols=40 Identities=43% Similarity=1.094 Sum_probs=37.4
Q ss_pred cCCCCCCcccccCCceecccccCCCCCCCCCCCCCcccCc
Q psy948 748 YRQCSESEFQCKNGKCIPAQWRCDHDEDCTDGSDEMECGG 787 (1576)
Q Consensus 748 ~~~C~~~~f~C~~g~CI~~~~~CDg~~DC~dgsDE~~C~~ 787 (1576)
+..|++++|+|.+|+|||..|+|||..||.|||||.+|..
T Consensus 4 p~~C~~~~F~C~nG~CIp~~~~CDG~~DC~DgSDE~~~~~ 43 (52)
T 2m0p_A 4 PASCLDTQYTCDNHQCISKNWVCDTDNDCGDGSDEKNCNS 43 (52)
T ss_dssp CCSSCSSEEECTTCCEEETTSTTSSSCSSSSCHHHHSCCC
T ss_pred CCCCCCCceECCCCCEEecCccCCCCCCCCCCCccccchh
Confidence 5689999999999999999999999999999999998853
No 62
>1cr8_A Protein (LOW density lipoprotein receptor related protein); ligand binding, calcium binding, LDLR, LRP, lipid binding protein; NMR {Homo sapiens} SCOP: g.12.1.1
Probab=98.84 E-value=1.7e-09 Score=86.32 Aligned_cols=38 Identities=55% Similarity=1.282 Sum_probs=35.3
Q ss_pred CCCCCCccccc-CCceecccccCCCCCCCCCCCCCcccC
Q psy948 749 RQCSESEFQCK-NGKCIPAQWRCDHDEDCTDGSDEMECG 786 (1576)
Q Consensus 749 ~~C~~~~f~C~-~g~CI~~~~~CDg~~DC~dgsDE~~C~ 786 (1576)
..|++.+|+|. +|+|||..|+|||..||.|||||.+|.
T Consensus 2 ~~C~~~~F~C~~~g~CI~~~~~CDg~~DC~DgSDE~~C~ 40 (42)
T 1cr8_A 2 GGCHTDEFQCRLDGLCIPLRWRCDGDTDCMDSSDEKSCE 40 (42)
T ss_dssp CCSSTTCEECTTTCCEECGGGSSSSSCCSSSSTTTTTCC
T ss_pred CCCCCCceEeCCCCeEcChhhcCCCCcCCCCCCcccCCC
Confidence 46899999998 499999999999999999999999985
No 63
>2m0p_A Low-density lipoprotein receptor-related protein; complement type repeat, megalin, LDL receptor FAMI lipid binding protein; NMR {Homo sapiens}
Probab=98.83 E-value=7.6e-10 Score=91.41 Aligned_cols=40 Identities=43% Similarity=1.094 Sum_probs=36.5
Q ss_pred CCCCCCCceecCCCeEEeCcccCCCCCCCCCCCCCCCccc
Q psy948 546 YRQCSESEFQCKNGKCIPAQWRCDHDEDCTDGSDEMECGG 585 (1576)
Q Consensus 546 ~~~C~~~~f~C~~g~Ci~~~~~CDg~~DC~dgsDE~~C~~ 585 (1576)
+..|++.+|+|.+|+|||..|+|||+.||.|||||.+|..
T Consensus 4 p~~C~~~~F~C~nG~CIp~~~~CDG~~DC~DgSDE~~~~~ 43 (52)
T 2m0p_A 4 PASCLDTQYTCDNHQCISKNWVCDTDNDCGDGSDEKNCNS 43 (52)
T ss_dssp CCSSCSSEEECTTCCEEETTSTTSSSCSSSSCHHHHSCCC
T ss_pred CCCCCCCceECCCCCEEecCccCCCCCCCCCCCccccchh
Confidence 4679999999999999999999999999999999998864
No 64
>2jm4_A Relaxin receptor 1; LDL-A module, RXFP1 receptor, LGR7, signaling protein; NMR {Homo sapiens}
Probab=98.82 E-value=2e-09 Score=86.34 Aligned_cols=39 Identities=38% Similarity=0.873 Sum_probs=36.2
Q ss_pred cCCCCCCcccccC-CceecccccCCCCCCCCCCCCCcccC
Q psy948 748 YRQCSESEFQCKN-GKCIPAQWRCDHDEDCTDGSDEMECG 786 (1576)
Q Consensus 748 ~~~C~~~~f~C~~-g~CI~~~~~CDg~~DC~dgsDE~~C~ 786 (1576)
...|++++|+|.+ |+|||..|+|||..||.|||||.+|.
T Consensus 4 ~~~C~~~~f~C~~~g~CI~~~~~CDg~~DC~DgSDE~~C~ 43 (43)
T 2jm4_A 4 DVKCSLGYFPCGNITKCLPQLLHCNGVDDCGNQADEDNCG 43 (43)
T ss_dssp SCSCCTTEEECSSSSCEEEGGGTTSSCCCSSSCCTTSSCC
T ss_pred CCCCCCCeeECCCCCeEcCHhhccCCCCCCCCCcccCCCC
Confidence 3579999999999 99999999999999999999999884
No 65
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=98.82 E-value=2.3e-09 Score=111.79 Aligned_cols=58 Identities=29% Similarity=0.691 Sum_probs=49.1
Q ss_pred ceeeccCCceeccCCCccccCCCCccCCCCcccc-ccccCCCceEEEcCCCcEecCCCCCce
Q psy948 1335 YLCTCYQGFIIDKNNAKKCLDVDECATGIHHCSQ-VCTNLNGTYACSCNAGFTLSDGLSGVC 1395 (1576)
Q Consensus 1335 ~~C~C~~G~~~~~~~~~~c~d~neC~~~~~~Cs~-lC~n~~gsy~C~Cp~G~~l~d~~~~~C 1395 (1576)
|.|+|++||++. .++.|+++|||+.+++.|.+ +|+|++|+|+|.|++||+|..+.+ +|
T Consensus 88 ~~C~C~~Gy~~~--~g~~C~dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~g~~~~~-~C 146 (147)
T 2w86_A 88 VDPICGKGYSRI--KGTQCEDIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLDATGR-IC 146 (147)
T ss_dssp CCTTTCTTEEEE--ETTEEEECCHHHHSTTCSSSSEEEEETTEEEEECCTTCCBCTTSS-CB
T ss_pred CcccCCCccccC--CCCccCccccccCCCCCCCCCEEECCCCCEEeeCCCCCccCCCCC-ee
Confidence 789999999863 36789999999987888975 999999999999999999975433 45
No 66
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.82 E-value=1.3e-07 Score=107.66 Aligned_cols=227 Identities=14% Similarity=0.207 Sum_probs=144.3
Q ss_pred eeE-EecCCCeEEEEeccCCceEec-ccccCCcceEEEeCCcceEEEecCCCcCeEEEEecCCCCcEEEEeccCCCCCcc
Q psy948 1167 LCA-LDVRSIKLDVAELDGTNRKTL-KTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPN 1244 (1576)
Q Consensus 1167 ~~a-vD~~~~~I~v~~ldG~~r~~l-~~~l~~P~~iavdP~~g~lywtd~g~~~~I~ra~mdGs~~~~iv~~~~~l~~P~ 1244 (1576)
+|+ .+...++|.+.+.++.....+ ...+..|.+|+++|. |.||+++. ..+|.+...+|.....+. ...+..|.
T Consensus 37 l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~-g~l~v~~~--~~~i~~~d~~~~~~~~~~--~~~~~~p~ 111 (270)
T 1rwi_B 37 VYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGA-GTVYVTDF--NNRVVTLAAGSNNQTVLP--FDGLNYPE 111 (270)
T ss_dssp EEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTT-CCEEEEET--TTEEEEECTTCSCCEECC--CCSCSSEE
T ss_pred EEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCC-CCEEEEcC--CCEEEEEeCCCceEeeee--cCCcCCCc
Confidence 455 556667777777665544444 345678999999995 66999987 568999988887654332 23467899
Q ss_pred eEEEeccCCeEEEEcCCCCeEEEEeCCCCceEEEEeCCCccceeEEeee-CCeEEEeccCCCcceeecccccccccccee
Q psy948 1245 ALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLF-EDHIYWTDWNTKSINRADKFNAREIQAGIL 1323 (1576)
Q Consensus 1245 gLaiD~~~~rlYw~D~~~~~I~s~~~dG~~r~~v~~~~~~~~P~~lavf-ed~lYwtd~~~~~i~~~~k~~~~~~~~~~~ 1323 (1576)
+|++|. .++||+++.....|..++. |+..........+..|.+|++. .+.||+++.....|.+++..+.
T Consensus 112 ~i~~~~-~g~l~v~~~~~~~i~~~~~-~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~-------- 181 (270)
T 1rwi_B 112 GLAVDT-QGAVYVADRGNNRVVKLAA-GSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESN-------- 181 (270)
T ss_dssp EEEECT-TCCEEEEEGGGTEEEEECT-TCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTC--------
T ss_pred ceEECC-CCCEEEEECCCCEEEEEEC-CCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCC--------
Confidence 999997 5679999998888988854 3333333333345678888876 3578877655444332221000
Q ss_pred cccccccCCCcceeeccCCceeccCCCccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceeccCCceE
Q psy948 1324 HHCMNITGGSGYLCTCYQGFIIDKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKANDNKLT 1403 (1576)
Q Consensus 1324 ~~c~n~~g~~~~~C~C~~G~~~~~~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~~~~~~ 1403 (1576)
. .
T Consensus 182 --------------------------------------------------------------------~----------~ 183 (270)
T 1rwi_B 182 --------------------------------------------------------------------N----------Q 183 (270)
T ss_dssp --------------------------------------------------------------------C----------E
T ss_pred --------------------------------------------------------------------c----------e
Confidence 0 0
Q ss_pred EEEecCCceeeeccccccccccccccccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCc
Q psy948 1404 IVYSNGPEIRAYETHKRRFRDVISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKL 1483 (1576)
Q Consensus 1404 ll~s~~~~Ir~i~~~~~~~~~~v~~~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p 1483 (1576)
.. . .......+.+|++|+.. .||+++...+.|++....+..... +...++..|
T Consensus 184 ~~---------~---------~~~~~~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~~~~~~~--------~~~~~~~~p 236 (270)
T 1rwi_B 184 VV---------L---------PFTDITAPWGIAVDEAG-TVYVTEHNTNQVVKLLAGSTTSTV--------LPFTGLNTP 236 (270)
T ss_dssp EE---------C---------CCSSCCSEEEEEECTTC-CEEEEETTTSCEEEECTTCSCCEE--------CCCCSCSCE
T ss_pred Ee---------e---------cccCCCCceEEEECCCC-CEEEEECCCCcEEEEcCCCCccee--------eccCCCCCc
Confidence 00 0 00011335567777654 899999888889887765432111 112234679
Q ss_pred ceeeecCCCCeEEEeecCCCCCCCCCeEEEEEcCCCc
Q psy948 1484 TAIAVDWIAHNIYWTVSDRSGSKPKGKVMVAHNDGRY 1520 (1576)
Q Consensus 1484 ~glAVDwv~~nLYWTD~~~~~~~~~~~I~v~~ldG~~ 1520 (1576)
.+||+|.. ++||+++.. .++|.+..++...
T Consensus 237 ~~i~~~~~-g~l~v~~~~------~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 237 LAVAVDSD-RTVYVADRG------NDRVVKLTSLEHH 266 (270)
T ss_dssp EEEEECTT-CCEEEEEGG------GTEEEEECCCGGG
T ss_pred eeEEECCC-CCEEEEECC------CCEEEEEcCCCcc
Confidence 99999965 579999986 5789988876653
No 67
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.82 E-value=4.2e-06 Score=98.69 Aligned_cols=273 Identities=13% Similarity=0.092 Sum_probs=166.1
Q ss_pred CCcceEEEeCCcceEEEecCCC-----cCeEEEEecCCCCcEEEEeccCCCCCcceEEEeccCCeEEEEcCCCCeEEEEe
Q psy948 1195 QDPRGITLHPGIGYVYFSSWNL-----QAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVD 1269 (1576)
Q Consensus 1195 ~~P~~iavdP~~g~lywtd~g~-----~~~I~ra~mdGs~~~~iv~~~~~l~~P~gLaiD~~~~rlYw~D~~~~~I~s~~ 1269 (1576)
..|.+++++|..++||++..+. ..+|...++........+. ....|.+++++...++||+++.....|...+
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~---~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d 117 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIH---NDLKPFGATINNTTQTLWFGNTVNSAVTAID 117 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEE---ESSCCCSEEEETTTTEEEEEETTTTEEEEEE
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEe---cCCCcceEEECCCCCEEEEEecCCCEEEEEe
Confidence 4688999999999999998763 4577777776544333333 2356999999999999999999999999999
Q ss_pred CCCCceEEEEeCCC--------ccceeEEee--eCCeEEEeccC-CCcceeeccccccccccceecccccccCCCcceee
Q psy948 1270 LDGKHKHIVISGQK--------VPHVFALTL--FEDHIYWTDWN-TKSINRADKFNAREIQAGILHHCMNITGGSGYLCT 1338 (1576)
Q Consensus 1270 ~dG~~r~~v~~~~~--------~~~P~~lav--fed~lYwtd~~-~~~i~~~~k~~~~~~~~~~~~~c~n~~g~~~~~C~ 1338 (1576)
+........+.... ..+|.++++ .++++|++++. ...|...+..+++..... ...+. .
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~------~~~~~--~--- 186 (353)
T 3vgz_A 118 AKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAI------QNTGK--M--- 186 (353)
T ss_dssp TTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEE------CCCCT--T---
T ss_pred CCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEe------cCCCC--c---
Confidence 87655433332211 124777777 45689999854 455666665433322110 00000 0
Q ss_pred ccCCceeccCCCccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceeccCCceEEEEecCCceeeeccc
Q psy948 1339 CYQGFIIDKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKANDNKLTIVYSNGPEIRAYETH 1418 (1576)
Q Consensus 1339 C~~G~~~~~~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~~~~~~ll~s~~~~Ir~i~~~ 1418 (1576)
+.+.....+. ..+++......|..+.+.
T Consensus 187 -------------------------------------------~~~~~~s~dg---------~~l~~~~~~~~i~~~d~~ 214 (353)
T 3vgz_A 187 -------------------------------------------STGLALDSEG---------KRLYTTNADGELITIDTA 214 (353)
T ss_dssp -------------------------------------------CCCCEEETTT---------TEEEEECTTSEEEEEETT
T ss_pred -------------------------------------------cceEEECCCC---------CEEEEEcCCCeEEEEECC
Confidence 0011111100 001111111222222222
Q ss_pred ccccccccc-----ccccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCC
Q psy948 1419 KRRFRDVIS-----DERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAH 1493 (1576)
Q Consensus 1419 ~~~~~~~v~-----~~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~ 1493 (1576)
.......+. ....+.+++|++..+.||.++...+.|+..++.... ++. ...++.+.+++++..++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~---~~~-------~~~~~~~~~~~~s~dg~ 284 (353)
T 3vgz_A 215 DNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGN---ILA-------KVAAPESLAVLFNPARN 284 (353)
T ss_dssp TTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCC---EEE-------EEECSSCCCEEEETTTT
T ss_pred CCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCc---EEE-------EEEcCCCceEEECCCCC
Confidence 111111110 123466789999999999999888888877654322 111 11235678999998888
Q ss_pred eEEEeecCCCCCCCCCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEecC
Q psy948 1494 NIYWTVSDRSGSKPKGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAETG 1550 (1576)
Q Consensus 1494 nLYWTD~~~~~~~~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g 1550 (1576)
.||.++.. .++|.+.++........+. ....|.+|+++|...+||.+...
T Consensus 285 ~l~v~~~~------~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 285 EAYVTHRQ------AGKVSVIDAKSYKVVKTFD-TPTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp EEEEEETT------TTEEEEEETTTTEEEEEEE-CCSEEEEEEECTTSCEEEEEEEC
T ss_pred EEEEEECC------CCeEEEEECCCCeEEEEEe-cCCCCCeEEEcCCCCEEEEEEcc
Confidence 89999864 4789999986544333333 33589999999998899999864
No 68
>3dpr_E LDL-receptor class A 3; human rhinovirus, VLDL-receptor, virus-protein complex, icosahedral virus, ATP-binding, capsid protein; HET: DAO; 3.50A {Homo sapiens} PDB: 1v9u_5*
Probab=98.80 E-value=2.3e-09 Score=84.07 Aligned_cols=36 Identities=47% Similarity=1.232 Sum_probs=33.9
Q ss_pred CCCCcccccC--CceecccccCCCCCCCCCCCCCcccC
Q psy948 751 CSESEFQCKN--GKCIPAQWRCDHDEDCTDGSDEMECG 786 (1576)
Q Consensus 751 C~~~~f~C~~--g~CI~~~~~CDg~~DC~dgsDE~~C~ 786 (1576)
|++.+|+|.+ |+|||..|+|||..||.|||||.+|+
T Consensus 1 C~~~~f~C~~~~g~Cip~~~~CDg~~DC~dgsDE~~C~ 38 (39)
T 3dpr_E 1 CRIHEISCGAHSTQCIPVSWRCDGENDCDSGEDEENCG 38 (39)
T ss_dssp CCTTTCCCSSSSSCCCCTTSSSSSSCCSTTTTTSTTCC
T ss_pred CCCCceecCCCCCCEeCccccCCCcccCcCCcccccCC
Confidence 6789999997 99999999999999999999999985
No 69
>1k7b_A Subgroup A ROUS sarcoma virus receptor PG800 and PG950; beta hairpin, 3-10 helix, calcium binding, membrane protein; NMR {Coturnix coturnix} SCOP: g.12.1.1
Probab=98.79 E-value=2.3e-09 Score=87.91 Aligned_cols=39 Identities=44% Similarity=1.234 Sum_probs=35.2
Q ss_pred cCCCCCCccccc-----CCceecccccCCCCCCCCCCCCCcccC
Q psy948 748 YRQCSESEFQCK-----NGKCIPAQWRCDHDEDCTDGSDEMECG 786 (1576)
Q Consensus 748 ~~~C~~~~f~C~-----~g~CI~~~~~CDg~~DC~dgsDE~~C~ 786 (1576)
+..|++.+|+|. +|+|||..|+|||..||.|||||.+|+
T Consensus 4 ~~~C~~~~F~C~~~~~~~g~CIp~~~~CDG~~DC~DgSDE~~C~ 47 (47)
T 1k7b_A 4 FGSCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDEWGCG 47 (47)
T ss_dssp --CCSTTEECCSSCTTSCCCCEEGGGSSCSSCCSSSSTTTGGGC
T ss_pred CCCCCCCceEcCCCCCCCCcCCCccccCCCcCCCCCCcccCCCC
Confidence 357999999998 799999999999999999999999984
No 70
>1k7b_A Subgroup A ROUS sarcoma virus receptor PG800 and PG950; beta hairpin, 3-10 helix, calcium binding, membrane protein; NMR {Coturnix coturnix} SCOP: g.12.1.1
Probab=98.79 E-value=2.1e-09 Score=88.14 Aligned_cols=39 Identities=44% Similarity=1.234 Sum_probs=34.2
Q ss_pred CCCCCCCceecC-----CCeEEeCcccCCCCCCCCCCCCCCCcc
Q psy948 546 YRQCSESEFQCK-----NGKCIPAQWRCDHDEDCTDGSDEMECG 584 (1576)
Q Consensus 546 ~~~C~~~~f~C~-----~g~Ci~~~~~CDg~~DC~dgsDE~~C~ 584 (1576)
+..|.+.+|+|. +|+|||.+|+|||+.||.|||||.+|+
T Consensus 4 ~~~C~~~~F~C~~~~~~~g~CIp~~~~CDG~~DC~DgSDE~~C~ 47 (47)
T 1k7b_A 4 FGSCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDEWGCG 47 (47)
T ss_dssp --CCSTTEECCSSCTTSCCCCEEGGGSSCSSCCSSSSTTTGGGC
T ss_pred CCCCCCCceEcCCCCCCCCcCCCccccCCCcCCCCCCcccCCCC
Confidence 357889999998 799999999999999999999999874
No 71
>3dpr_E LDL-receptor class A 3; human rhinovirus, VLDL-receptor, virus-protein complex, icosahedral virus, ATP-binding, capsid protein; HET: DAO; 3.50A {Homo sapiens} PDB: 1v9u_5*
Probab=98.77 E-value=2.4e-09 Score=83.90 Aligned_cols=36 Identities=47% Similarity=1.232 Sum_probs=30.5
Q ss_pred CCCCceecCC--CeEEeCcccCCCCCCCCCCCCCCCcc
Q psy948 549 CSESEFQCKN--GKCIPAQWRCDHDEDCTDGSDEMECG 584 (1576)
Q Consensus 549 C~~~~f~C~~--g~Ci~~~~~CDg~~DC~dgsDE~~C~ 584 (1576)
|++.+|+|.+ |+|||.+|+|||..||.|||||.+|+
T Consensus 1 C~~~~f~C~~~~g~Cip~~~~CDg~~DC~dgsDE~~C~ 38 (39)
T 3dpr_E 1 CRIHEISCGAHSTQCIPVSWRCDGENDCDSGEDEENCG 38 (39)
T ss_dssp CCTTTCCCSSSSSCCCCTTSSSSSSCCSTTTTTSTTCC
T ss_pred CCCCceecCCCCCCEeCccccCCCcccCcCCcccccCC
Confidence 5677888887 88999999999999999999988875
No 72
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.74 E-value=1.2e-06 Score=100.74 Aligned_cols=141 Identities=11% Similarity=0.169 Sum_probs=105.2
Q ss_pred ceeEEecCCCeEEEEeccCCceEecc------cccCCcceEEEeCCcceEEEecCCCcCeEEEEecCCCCcEEEEeccCC
Q psy948 1166 PLCALDVRSIKLDVAELDGTNRKTLK------TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDD 1239 (1576)
Q Consensus 1166 ~~~avD~~~~~I~v~~ldG~~r~~l~------~~l~~P~~iavdP~~g~lywtd~g~~~~I~ra~mdGs~~~~iv~~~~~ 1239 (1576)
.+|++|...++|.+.+++|...+.+. ..+..|.+|++++..|.||.++.+....|.+...+|...+.+. ...
T Consensus 42 ~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~--~~~ 119 (286)
T 1q7f_A 42 DIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFG--ATI 119 (286)
T ss_dssp CEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTTSCEEEEEC--TTT
T ss_pred CEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCCCcEEEEec--Ccc
Confidence 46777777888888888887665553 2356899999988899999999765678888888876543332 235
Q ss_pred CCCcceEEEeccCCeEEEEcCCCCeEEEEeCCCCceEEEEeCCCccceeEEeeeC-CeEEEeccCCCccee
Q psy948 1240 IAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLFE-DHIYWTDWNTKSINR 1309 (1576)
Q Consensus 1240 l~~P~gLaiD~~~~rlYw~D~~~~~I~s~~~dG~~r~~v~~~~~~~~P~~lavfe-d~lYwtd~~~~~i~~ 1309 (1576)
+..|.+|++|.. ++||+++.....|...+.+|.....+.....+..|.+|++.. +.||+++.....|..
T Consensus 120 ~~~~~~i~~~~~-g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~ 189 (286)
T 1q7f_A 120 LQHPRGVTVDNK-GRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKV 189 (286)
T ss_dssp CSCEEEEEECTT-SCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEE
T ss_pred CCCceEEEEeCC-CCEEEEECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEE
Confidence 678999999975 579999999999999998887665554334567789999874 578888765555443
No 73
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.73 E-value=3.5e-07 Score=109.06 Aligned_cols=110 Identities=19% Similarity=0.268 Sum_probs=76.6
Q ss_pred ceeeecccCCcEEEEeecccceeEEEeecccccceeeecc-cceee-eeccCCcceeeecCCCCeEEEeecCCCCCCCCC
Q psy948 1432 IEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGF-GQDLG-IKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPKG 1509 (1576)
Q Consensus 1432 i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~-~~~~~-~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~~ 1509 (1576)
+.+|++++..+.||+++....+|+++.........+.... ...+. ....+.|.|||+|. .++||.++.. .+
T Consensus 197 ~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~-~G~l~va~~~------~~ 269 (343)
T 2qe8_A 197 VNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDK-DHNIYVGDLA------HS 269 (343)
T ss_dssp EEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECT-TCCEEEEEGG------GT
T ss_pred cceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECC-CCCEEEEccC------CC
Confidence 4578888888899999998889998865322111110000 00111 12345799999997 4799999985 57
Q ss_pred eEEEEEc-CCCceEEEee-CCCCCceEEEEecCCCeEEEEecC
Q psy948 1510 KVMVAHN-DGRYRRSLVS-ENLESPSSIALDPTLGKMFWAETG 1550 (1576)
Q Consensus 1510 ~I~v~~l-dG~~~~~lv~-~~l~~P~~IavDp~~G~LYWTD~g 1550 (1576)
+|.+.+. +|+. ++++. ..+..|.+||+++. |.||.++..
T Consensus 270 ~V~~~d~~~G~~-~~~~~~~~~~~p~~va~~~~-g~l~v~~~~ 310 (343)
T 2qe8_A 270 AIGVITSADRAY-KLLVTDEKLSWTDSFNFGSD-GYLYFDCNQ 310 (343)
T ss_dssp EEEEEETTTTEE-EEEEECGGGSCEEEEEECTT-SCEEEEECC
T ss_pred eEEEEECCCCCE-EEEEECCceecCCeeEECCC-CcEEEEeCc
Confidence 8999999 8864 44443 34788999999985 899999864
No 74
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.72 E-value=2.8e-06 Score=99.19 Aligned_cols=264 Identities=16% Similarity=0.146 Sum_probs=159.5
Q ss_pred cCCceEecccccCCcceEEEeCCcceEEEecCCCcCeEEEEecCCCCcEEEEeccCCCCCcceEEEeccCCeEEEEcCCC
Q psy948 1183 DGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHL 1262 (1576)
Q Consensus 1183 dG~~r~~l~~~l~~P~~iavdP~~g~lywtd~g~~~~I~ra~mdGs~~~~iv~~~~~l~~P~gLaiD~~~~rlYw~D~~~ 1262 (1576)
.+....+|.++...+.+++.+|..++|||++.. ..+|.+...+|.. +++. .....|+||++|.. ++||+++...
T Consensus 33 ~~~~~~~l~~~~~~~egp~~~~~g~~l~~~d~~-~~~i~~~~~~g~~-~~~~---~~~~~~~gl~~d~d-G~l~v~~~~~ 106 (305)
T 3dr2_A 33 GDARLLTLYDQATWSEGPAWWEAQRTLVWSDLV-GRRVLGWREDGTV-DVLL---DATAFTNGNAVDAQ-QRLVHCEHGR 106 (305)
T ss_dssp TTCCCEEEECCCSSEEEEEEEGGGTEEEEEETT-TTEEEEEETTSCE-EEEE---ESCSCEEEEEECTT-SCEEEEETTT
T ss_pred CCCceEEEecCCcCccCCeEeCCCCEEEEEECC-CCEEEEEeCCCCE-EEEe---CCCCccceeeECCC-CCEEEEECCC
Confidence 345556677788889999999999999999864 3578888877752 2222 24568999999974 6799999888
Q ss_pred CeEEEEeCCCCceEEEEe--CCCccceeEEeee-CCeEEEeccCCCcceeeccccccccccceecccccccCCCcceeec
Q psy948 1263 DYIASVDLDGKHKHIVIS--GQKVPHVFALTLF-EDHIYWTDWNTKSINRADKFNAREIQAGILHHCMNITGGSGYLCTC 1339 (1576)
Q Consensus 1263 ~~I~s~~~dG~~r~~v~~--~~~~~~P~~lavf-ed~lYwtd~~~~~i~~~~k~~~~~~~~~~~~~c~n~~g~~~~~C~C 1339 (1576)
..|...+.+|+-+.++.. +..+..|..|++. .+.||+||........ +
T Consensus 107 ~~v~~~~~~g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~---~-------------------------- 157 (305)
T 3dr2_A 107 RAITRSDADGQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKP---S-------------------------- 157 (305)
T ss_dssp TEEEEECTTSCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCG---G--------------------------
T ss_pred CEEEEECCCCCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCcccc---c--------------------------
Confidence 899999998764333221 1223456666665 4567777642111000 0
Q ss_pred cCCceeccCCCccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceeccCCceEEEEecCCceeeecccc
Q psy948 1340 YQGFIIDKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKANDNKLTIVYSNGPEIRAYETHK 1419 (1576)
Q Consensus 1340 ~~G~~~~~~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~~~~~~ll~s~~~~Ir~i~~~~ 1419 (1576)
.+.... ... . ...|+++....
T Consensus 158 -~~~~~~------------------------------------------~~~-------~---------~~~v~~~d~~~ 178 (305)
T 3dr2_A 158 -QGCPAD------------------------------------------PEL-------A---------HHSVYRLPPDG 178 (305)
T ss_dssp -GSCCCC------------------------------------------CSS-------S---------CEEEEEECSSS
T ss_pred -cccccc------------------------------------------ccc-------C---------CCeEEEEcCCC
Confidence 000000 000 0 00011111110
Q ss_pred ccccccccccccceeeecccCCcEEEEeeccc-----ceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCe
Q psy948 1420 RRFRDVISDERRIEALDIDPVDEIIYWVDSYD-----RNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHN 1494 (1576)
Q Consensus 1420 ~~~~~~v~~~~~i~ald~D~~~~~vYWsD~~~-----~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~n 1494 (1576)
..+..+. ....+.+|++++..+.|||++... +.|++..+.+.. +.. ...+.....+.|.||++|.. ++
T Consensus 179 g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~---l~~--~~~~~~~~~~~pdgi~~d~~-G~ 251 (305)
T 3dr2_A 179 SPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA---LHD--RRHFASVPDGLPDGFCVDRG-GW 251 (305)
T ss_dssp CCCEEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE---EEE--EEEEECCSSSCCCSEEECTT-SC
T ss_pred CcEEEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC---ccC--CeEEEECCCCCCCeEEECCC-CC
Confidence 1111111 223456788999899999999863 788887766422 110 01111113467999999964 55
Q ss_pred EEEeecCCCCCCCCCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEecCCCCcEEEeec
Q psy948 1495 IYWTVSDRSGSKPKGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAETGASPRIESAWM 1560 (1576)
Q Consensus 1495 LYWTD~~~~~~~~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~m 1560 (1576)
||.+.. +.|.+.+.+|+....+.... .|..+++.|..+.||.|..+ .|.|..+
T Consensus 252 lwv~~~--------~gv~~~~~~g~~~~~~~~~~--~~~~~~f~~d~~~L~it~~~---~l~~~~~ 304 (305)
T 3dr2_A 252 LWSSSG--------TGVCVFDSDGQLLGHIPTPG--TASNCTFDQAQQRLFITGGP---CLWMLPL 304 (305)
T ss_dssp EEECCS--------SEEEEECTTSCEEEEEECSS--CCCEEEECTTSCEEEEEETT---EEEEEEC
T ss_pred EEEecC--------CcEEEECCCCCEEEEEECCC--ceeEEEEeCCCCEEEEEcCC---eEEEEEC
Confidence 665542 45999999988666554332 59999999888889988754 5666543
No 75
>2knx_A Prolow-density lipoprotein receptor-related prote; LDLR, ligand binding module, ligand binding repeat, compleme repeat, protein binding; NMR {Homo sapiens}
Probab=98.72 E-value=6.8e-09 Score=85.77 Aligned_cols=39 Identities=41% Similarity=1.014 Sum_probs=35.8
Q ss_pred CCCCCCCceecC-CCeEEeCcccCCCCCCCCCCCCCCCcc
Q psy948 546 YRQCSESEFQCK-NGKCIPAQWRCDHDEDCTDGSDEMECG 584 (1576)
Q Consensus 546 ~~~C~~~~f~C~-~g~Ci~~~~~CDg~~DC~dgsDE~~C~ 584 (1576)
...|.+.+|+|. +|+|||..|+|||+.||.|||||.+|.
T Consensus 4 ~~~C~~~~F~C~~~g~CI~~~~~CDG~~DC~DgSDE~~C~ 43 (50)
T 2knx_A 4 GKTCGPSSFSCPGTHVCVPERWLCDGDKDCADGADESIAA 43 (50)
T ss_dssp TCTTCTTEEEETTTTEEEETTTTTSSSCCSTTCGGGSGGG
T ss_pred CCCCCCCcEEcCCCCeEcChhhcCCCCCCCCCCCcccccc
Confidence 357999999995 999999999999999999999999885
No 76
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.70 E-value=4.3e-07 Score=107.52 Aligned_cols=135 Identities=16% Similarity=0.172 Sum_probs=102.4
Q ss_pred ceeEEecCCCeEEEEeccCC--ceEec---------ccccCCcceEEEeCCcceEEEecCCCcCeEEEEecCCCCcEEEE
Q psy948 1166 PLCALDVRSIKLDVAELDGT--NRKTL---------KTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRIL 1234 (1576)
Q Consensus 1166 ~~~avD~~~~~I~v~~ldG~--~r~~l---------~~~l~~P~~iavdP~~g~lywtd~g~~~~I~ra~mdGs~~~~iv 1234 (1576)
.+|++|....+|.+.+++|. ...++ ...+..|.+||++|..|.||+++.....+|.+...+|.....+.
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~~~~~~ 182 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFVTQWG 182 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSCEEEEEC
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCEEEEec
Confidence 47888888899999999987 34444 23466899999999999999999644678999899988655443
Q ss_pred ec-------cCCCCCcceEEEeccCCeEEEEcCCCCeEEEEeCC-CCceEEEEeCCCccceeEEeeeCCeEEEe
Q psy948 1235 TH-------EDDIAWPNALTLDYFTERLYWADAHLDYIASVDLD-GKHKHIVISGQKVPHVFALTLFEDHIYWT 1300 (1576)
Q Consensus 1235 ~~-------~~~l~~P~gLaiD~~~~rlYw~D~~~~~I~s~~~d-G~~r~~v~~~~~~~~P~~lavfed~lYwt 1300 (1576)
.. ...+.+|.||++|..+++||++|...++|...+++ |+....+........|+++++..+.+|.+
T Consensus 183 ~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~ 256 (329)
T 3fvz_A 183 EESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAV 256 (329)
T ss_dssp EECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEE
T ss_pred cCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEe
Confidence 22 12457899999998889999999999999999998 77666554333345567766665555554
No 77
>1j8e_A Low-density lipoprotein receptor-related protein 1; ligand binding, calcium binding, complement-like repeat, LRP receptor, signaling protein; 1.85A {Homo sapiens} SCOP: g.12.1.1
Probab=98.70 E-value=4.9e-09 Score=84.50 Aligned_cols=37 Identities=49% Similarity=1.207 Sum_probs=34.9
Q ss_pred CCCCCCcccccCCceecccccCCCCCCCCCCCCCccc
Q psy948 749 RQCSESEFQCKNGKCIPAQWRCDHDEDCTDGSDEMEC 785 (1576)
Q Consensus 749 ~~C~~~~f~C~~g~CI~~~~~CDg~~DC~dgsDE~~C 785 (1576)
..|++.+|+|.+|+|||..|+|||..||.|||||..|
T Consensus 3 ~~C~~~~F~C~~g~CI~~~~~CDg~~DC~DgSDE~~~ 39 (44)
T 1j8e_A 3 HSCSSTQFKCNSGRCIPEHWTCDGDNDCGDYSDETHA 39 (44)
T ss_dssp SSSCTTEEECTTSCEEEGGGTTSSSCCSSSSGGGSHH
T ss_pred CCCCCCceEeCCCCeEecCcccCCCCCCCCCCCCCCc
Confidence 4699999999999999999999999999999999875
No 78
>2knx_A Prolow-density lipoprotein receptor-related prote; LDLR, ligand binding module, ligand binding repeat, compleme repeat, protein binding; NMR {Homo sapiens}
Probab=98.69 E-value=6.2e-09 Score=86.01 Aligned_cols=39 Identities=41% Similarity=1.014 Sum_probs=35.9
Q ss_pred cCCCCCCccccc-CCceecccccCCCCCCCCCCCCCcccC
Q psy948 748 YRQCSESEFQCK-NGKCIPAQWRCDHDEDCTDGSDEMECG 786 (1576)
Q Consensus 748 ~~~C~~~~f~C~-~g~CI~~~~~CDg~~DC~dgsDE~~C~ 786 (1576)
+..|++.+|+|. +|+|||..|+|||..||.|||||..|.
T Consensus 4 ~~~C~~~~F~C~~~g~CI~~~~~CDG~~DC~DgSDE~~C~ 43 (50)
T 2knx_A 4 GKTCGPSSFSCPGTHVCVPERWLCDGDKDCADGADESIAA 43 (50)
T ss_dssp TCTTCTTEEEETTTTEEEETTTTTSSSCCSTTCGGGSGGG
T ss_pred CCCCCCCcEEcCCCCeEcChhhcCCCCCCCCCCCcccccc
Confidence 357999999995 999999999999999999999999874
No 79
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.69 E-value=1.2e-06 Score=103.82 Aligned_cols=246 Identities=8% Similarity=0.017 Sum_probs=147.1
Q ss_pred CcceEEEeccCCeEEEEcCCCCeEEEEeCCCCce-EEEEeCCCccceeEEee-eCCeEEEeccCCCcceeeccccccccc
Q psy948 1242 WPNALTLDYFTERLYWADAHLDYIASVDLDGKHK-HIVISGQKVPHVFALTL-FEDHIYWTDWNTKSINRADKFNAREIQ 1319 (1576)
Q Consensus 1242 ~P~gLaiD~~~~rlYw~D~~~~~I~s~~~dG~~r-~~v~~~~~~~~P~~lav-fed~lYwtd~~~~~i~~~~k~~~~~~~ 1319 (1576)
.|.+|+++ .++||++....+.|..++...... ..+ . ....|.+|++ .++++|+++.....|..++..+++...
T Consensus 45 ~~~~i~~~--~~~lyv~~~~~~~v~viD~~t~~~~~~i-~--~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~ 119 (328)
T 3dsm_A 45 VAQSMVIR--DGIGWIVVNNSHVIFAIDINTFKEVGRI-T--GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITG 119 (328)
T ss_dssp CEEEEEEE--TTEEEEEEGGGTEEEEEETTTCCEEEEE-E--CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEE
T ss_pred cceEEEEE--CCEEEEEEcCCCEEEEEECcccEEEEEc-C--CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEE
Confidence 57788875 689999999999999999874433 444 2 3578999999 788999999777788877765543221
Q ss_pred cceecccccccCCCcceeeccCCceeccCCCccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceeccC
Q psy948 1320 AGILHHCMNITGGSGYLCTCYQGFIIDKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKAND 1399 (1576)
Q Consensus 1320 ~~~~~~c~n~~g~~~~~C~C~~G~~~~~~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~~ 1399 (1576)
... + +. +. ++. .. |.+... ++
T Consensus 120 ~i~------~-g~---------~~------~~~-----------~~----------------p~~i~~-~~--------- 140 (328)
T 3dsm_A 120 YIE------C-PD---------MD------MES-----------GS----------------TEQMVQ-YG--------- 140 (328)
T ss_dssp EEE------C-TT---------CC------TTT-----------CB----------------CCCEEE-ET---------
T ss_pred EEE------c-CC---------cc------ccC-----------CC----------------cceEEE-EC---------
Confidence 100 0 00 00 000 00 111111 11
Q ss_pred CceEEEEe-cCCceeeeccccccccccccccccceeeecccCCcEEEEeeccc----------ceeEEEeecccccceee
Q psy948 1400 NKLTIVYS-NGPEIRAYETHKRRFRDVISDERRIEALDIDPVDEIIYWVDSYD----------RNIRRSFMLEAQKGQVQ 1468 (1576)
Q Consensus 1400 ~~~~ll~s-~~~~Ir~i~~~~~~~~~~v~~~~~i~ald~D~~~~~vYWsD~~~----------~~I~r~~l~~~~~~~v~ 1468 (1576)
..+++... ....|..+.+........+.....+.+|.+++. +++|++.... +.|++.+... .++.
T Consensus 141 ~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~d-G~l~v~~~~~~~~~~~~~~~~~v~~id~~t---~~v~ 216 (328)
T 3dsm_A 141 KYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKY-NKMWTITDGGYEGSPYGYEAPSLYRIDAET---FTVE 216 (328)
T ss_dssp TEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTT-SEEEEEBCCBCTTCSSCBCCCEEEEEETTT---TEEE
T ss_pred CEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCC-CCEEEEECCCccCCccccCCceEEEEECCC---CeEE
Confidence 11122111 123344444333222222222335677888864 5688887664 6787766432 2222
Q ss_pred ecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCCCCeEEEEEcCCCceE--EEeeCCCCCceEEEEecCCCeEEE
Q psy948 1469 AGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPKGKVMVAHNDGRYRR--SLVSENLESPSSIALDPTLGKMFW 1546 (1576)
Q Consensus 1469 ~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~~~I~v~~ldG~~~~--~lv~~~l~~P~~IavDp~~G~LYW 1546 (1576)
. .+.+.....|.+||++...+.||+++. +|.+.++...... .++......|.+|||||..|+||.
T Consensus 217 ~----~~~~~~g~~p~~la~~~d~~~lyv~~~---------~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyv 283 (328)
T 3dsm_A 217 K----QFKFKLGDWPSEVQLNGTRDTLYWINN---------DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYV 283 (328)
T ss_dssp E----EEECCTTCCCEEEEECTTSCEEEEESS---------SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEE
T ss_pred E----EEecCCCCCceeEEEecCCCEEEEEcc---------EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEE
Confidence 1 111222247999999998999999864 4888887654321 122223578999999999999999
Q ss_pred Eec---CCCCcEEEeecCCCCcEEE
Q psy948 1547 AET---GASPRIESAWMDGSHRSAT 1568 (1576)
Q Consensus 1547 TD~---g~~~~Iera~mDGs~r~~i 1568 (1576)
+++ ....+|.+.+.+|+....|
T Consensus 284 a~~~~y~~~~~V~v~d~~g~~~~~i 308 (328)
T 3dsm_A 284 ADAIDYQQQGIVYRYSPQGKLIDEF 308 (328)
T ss_dssp EECTTSSSEEEEEEECTTCCEEEEE
T ss_pred EcccccccCCEEEEECCCCCEEEEE
Confidence 993 2244899999998765544
No 80
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.69 E-value=3.2e-06 Score=97.20 Aligned_cols=242 Identities=14% Similarity=0.184 Sum_probs=145.2
Q ss_pred CCCCCcceEEEeccCCeEEEEcCCCCeEEEEeCCCCceEEEEeCCCccceeEEeee-CCeEEEeccCCCcceeecccccc
Q psy948 1238 DDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLF-EDHIYWTDWNTKSINRADKFNAR 1316 (1576)
Q Consensus 1238 ~~l~~P~gLaiD~~~~rlYw~D~~~~~I~s~~~dG~~r~~v~~~~~~~~P~~lavf-ed~lYwtd~~~~~i~~~~k~~~~ 1316 (1576)
.....|.+|++|. .++||+++.....|...+.+|.-.... .......|.+|++. .+.+|+++.....|.+.+.. +.
T Consensus 12 ~~~~~~~~i~~d~-~g~l~v~~~~~~~v~~~d~~~~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~ 88 (299)
T 2z2n_A 12 NQDTGPYGITVSD-KGKVWITQHKANMISCINLDGKITEYP-LPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GI 88 (299)
T ss_dssp SSSCCEEEEEECT-TSCEEEEETTTTEEEEECTTCCEEEEE-CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred CcCCCccceEECC-CCCEEEEecCCCcEEEEcCCCCeEEec-CCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-Cc
Confidence 4567899999995 567999998888999999884433322 22235678999985 56889888777777776643 11
Q ss_pred ccccceecccccccCCCcceeeccCCceeccCCCccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCcee
Q psy948 1317 EIQAGILHHCMNITGGSGYLCTCYQGFIIDKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCK 1396 (1576)
Q Consensus 1317 ~~~~~~~~~c~n~~g~~~~~C~C~~G~~~~~~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~ 1396 (1576)
... . ..+.. . . . |.+....
T Consensus 89 -~~~-~-----~~~~~-----------------~------------~-~----------------~~~i~~~-------- 107 (299)
T 2z2n_A 89 -IKE-Y-----TLPNP-----------------D------------S-A----------------PYGITEG-------- 107 (299)
T ss_dssp -EEE-E-----ECSST-----------------T------------C-C----------------EEEEEEC--------
T ss_pred -EEE-E-----eCCCc-----------------C------------C-C----------------ceeeEEC--------
Confidence 100 0 00000 0 0 0 0000110
Q ss_pred ccCCceEEEEecCCceeeecccccccccc--ccccccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccce
Q psy948 1397 ANDNKLTIVYSNGPEIRAYETHKRRFRDV--ISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQD 1474 (1576)
Q Consensus 1397 ~~~~~~~ll~s~~~~Ir~i~~~~~~~~~~--v~~~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~ 1474 (1576)
....+++.......|..+.... .+..+ ......+.+|.+|+. ++||+++...+.|++....+ ++.. .
T Consensus 108 -~~g~l~v~~~~~~~i~~~d~~g-~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~~~~g----~~~~-~--- 176 (299)
T 2z2n_A 108 -PNGDIWFTEMNGNRIGRITDDG-KIREYELPNKGSYPSFITLGSD-NALWFTENQNNAIGRITESG----DITE-F--- 176 (299)
T ss_dssp -TTSCEEEEETTTTEEEEECTTC-CEEEEECSSTTCCEEEEEECTT-SCEEEEETTTTEEEEECTTC----CEEE-E---
T ss_pred -CCCCEEEEecCCceEEEECCCC-CEEEecCCCCCCCCceEEEcCC-CCEEEEeCCCCEEEEEcCCC----cEEE-e---
Confidence 0111122111233444444321 11111 112345778888865 58999888888898876522 1111 0
Q ss_pred eeeeccCCcceeeecCCCCeEEEeecCCCCCCCCCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEecCCCCc
Q psy948 1475 LGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPKGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAETGASPR 1554 (1576)
Q Consensus 1475 ~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~~~~ 1554 (1576)
........|.+|++|.. ++||+++.. .+.|.+.+++|+.....+......|.+|++|+. |.||+++.+.. .
T Consensus 177 ~~~~~~~~~~~i~~~~~-g~l~v~~~~------~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~-~ 247 (299)
T 2z2n_A 177 KIPTPASGPVGITKGND-DALWFVEII------GNKIGRITTSGEITEFKIPTPNARPHAITAGAG-IDLWFTEWGAN-K 247 (299)
T ss_dssp ECSSTTCCEEEEEECTT-SSEEEEETT------TTEEEEECTTCCEEEEECSSTTCCEEEEEECST-TCEEEEETTTT-E
T ss_pred eCCCCCCcceeEEECCC-CCEEEEccC------CceEEEECCCCcEEEEECCCCCCCceeEEECCC-CCEEEeccCCc-e
Confidence 01123457899999965 679999864 468999988776544334456788999999986 78999986643 7
Q ss_pred EEEeecCCC
Q psy948 1555 IESAWMDGS 1563 (1576)
Q Consensus 1555 Iera~mDGs 1563 (1576)
|.+.+.+|.
T Consensus 248 i~~~d~~g~ 256 (299)
T 2z2n_A 248 IGRLTSNNI 256 (299)
T ss_dssp EEEEETTTE
T ss_pred EEEECCCCc
Confidence 888888764
No 81
>1j8e_A Low-density lipoprotein receptor-related protein 1; ligand binding, calcium binding, complement-like repeat, LRP receptor, signaling protein; 1.85A {Homo sapiens} SCOP: g.12.1.1
Probab=98.68 E-value=5.3e-09 Score=84.27 Aligned_cols=37 Identities=49% Similarity=1.207 Sum_probs=34.2
Q ss_pred CCCCCCceecCCCeEEeCcccCCCCCCCCCCCCCCCc
Q psy948 547 RQCSESEFQCKNGKCIPAQWRCDHDEDCTDGSDEMEC 583 (1576)
Q Consensus 547 ~~C~~~~f~C~~g~Ci~~~~~CDg~~DC~dgsDE~~C 583 (1576)
..|++.+|+|.+|+|||..|+|||+.||.|||||.+|
T Consensus 3 ~~C~~~~F~C~~g~CI~~~~~CDg~~DC~DgSDE~~~ 39 (44)
T 1j8e_A 3 HSCSSTQFKCNSGRCIPEHWTCDGDNDCGDYSDETHA 39 (44)
T ss_dssp SSSCTTEEECTTSCEEEGGGTTSSSCCSSSSGGGSHH
T ss_pred CCCCCCceEeCCCCeEecCcccCCCCCCCCCCCCCCc
Confidence 4688899999999999999999999999999999875
No 82
>2i1p_A Low-density lipoprotein receptor-related protein 2; cysteine-rich repeat, ligand binding domain, calcium CAGE, ligand binding protein; NMR {Rattus norvegicus}
Probab=98.68 E-value=4.8e-09 Score=86.25 Aligned_cols=39 Identities=41% Similarity=1.000 Sum_probs=36.5
Q ss_pred CCCCCCcccccCC-ceecccccCCCCCCCCCCCCCcccCc
Q psy948 749 RQCSESEFQCKNG-KCIPAQWRCDHDEDCTDGSDEMECGG 787 (1576)
Q Consensus 749 ~~C~~~~f~C~~g-~CI~~~~~CDg~~DC~dgsDE~~C~~ 787 (1576)
..|++.+|+|.+| +|||..|+|||..||.|||||.+|..
T Consensus 5 ~~C~~~~F~C~~g~~CI~~~~~CDG~~DC~DgSDE~~C~~ 44 (48)
T 2i1p_A 5 LNCTSAQFKCADGSSCINSRYRCDGVYDCRDNSDEAGCPT 44 (48)
T ss_dssp CCCCSSSEECSSSSCEECGGGSSSSSCCSSSSHHHHSSCS
T ss_pred CCCCCCeeECCCCCEeCCHhhcCCCCCCCCCCcccccCCC
Confidence 4699999999999 89999999999999999999999864
No 83
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.65 E-value=8.5e-06 Score=96.37 Aligned_cols=266 Identities=12% Similarity=0.124 Sum_probs=153.7
Q ss_pred CCcceEEEeCCcceEEEecCCCcCeEEEEecC-CCCcEEEEeccCCCCCcceEEEeccCCeEEEEcCCCCeEEEEeCCCC
Q psy948 1195 QDPRGITLHPGIGYVYFSSWNLQAYIGKIGMD-GSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGK 1273 (1576)
Q Consensus 1195 ~~P~~iavdP~~g~lywtd~g~~~~I~ra~md-Gs~~~~iv~~~~~l~~P~gLaiD~~~~rlYw~D~~~~~I~s~~~dG~ 1273 (1576)
..|++|+++ .++||.+.++ ...|...+.. |.-..+| .....|.+|+++... +||+++...+.|..+++...
T Consensus 44 ~~~~~i~~~--~~~lyv~~~~-~~~v~viD~~t~~~~~~i----~~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~ 115 (328)
T 3dsm_A 44 DVAQSMVIR--DGIGWIVVNN-SHVIFAIDINTFKEVGRI----TGFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTY 115 (328)
T ss_dssp SCEEEEEEE--TTEEEEEEGG-GTEEEEEETTTCCEEEEE----ECCSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTT
T ss_pred ccceEEEEE--CCEEEEEEcC-CCEEEEEECcccEEEEEc----CCCCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCC
Confidence 458899886 5789998864 3567776665 3332333 246899999997654 99999988899999998765
Q ss_pred ceEEEEe-CC---CccceeEEeeeCCeEEEeccC-CCcceeeccccccccccceecccccccCCCcceeeccCCceeccC
Q psy948 1274 HKHIVIS-GQ---KVPHVFALTLFEDHIYWTDWN-TKSINRADKFNAREIQAGILHHCMNITGGSGYLCTCYQGFIIDKN 1348 (1576)
Q Consensus 1274 ~r~~v~~-~~---~~~~P~~lavfed~lYwtd~~-~~~i~~~~k~~~~~~~~~~~~~c~n~~g~~~~~C~C~~G~~~~~~ 1348 (1576)
.....+. +. ....|.+|++.+++||.+++. ...|..++..+++...... .+. =|.+..+.+
T Consensus 116 ~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~-------~g~------~p~~i~~~~- 181 (328)
T 3dsm_A 116 EITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELT-------IGI------QPTSLVMDK- 181 (328)
T ss_dssp EEEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEE-------CSS------CBCCCEECT-
T ss_pred eEEEEEEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEE-------cCC------CccceEEcC-
Confidence 4332222 11 123788999999999999984 7788888765554322100 000 011111110
Q ss_pred CCccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceeccCCceEEEEecCCceeeeccccccccccc--
Q psy948 1349 NAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKANDNKLTIVYSNGPEIRAYETHKRRFRDVI-- 1426 (1576)
Q Consensus 1349 ~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~~~~~~ll~s~~~~Ir~i~~~~~~~~~~v-- 1426 (1576)
.|...=.....+.... . .... ..|..+......+...+
T Consensus 182 -------------------------dG~l~v~~~~~~~~~~-~----~~~~----------~~v~~id~~t~~v~~~~~~ 221 (328)
T 3dsm_A 182 -------------------------YNKMWTITDGGYEGSP-Y----GYEA----------PSLYRIDAETFTVEKQFKF 221 (328)
T ss_dssp -------------------------TSEEEEEBCCBCTTCS-S----CBCC----------CEEEEEETTTTEEEEEEEC
T ss_pred -------------------------CCCEEEEECCCccCCc-c----ccCC----------ceEEEEECCCCeEEEEEec
Confidence 0110000000000000 0 0000 12223322211111111
Q ss_pred cccccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEee----cCC
Q psy948 1427 SDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTV----SDR 1502 (1576)
Q Consensus 1427 ~~~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD----~~~ 1502 (1576)
.....+.+|++++..++||+++. .|++.++.... +.. ..+.-.....|.|||||+..++||.++ ..
T Consensus 222 ~~g~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~~---~~~---~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~- 291 (328)
T 3dsm_A 222 KLGDWPSEVQLNGTRDTLYWINN---DIWRMPVEADR---VPV---RPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQ- 291 (328)
T ss_dssp CTTCCCEEEEECTTSCEEEEESS---SEEEEETTCSS---CCS---SCSBCCCSSCEEEEEECTTTCCEEEEECTTSSS-
T ss_pred CCCCCceeEEEecCCCEEEEEcc---EEEEEECCCCc---eee---eeeecCCCCceEEEEEcCCCCeEEEEccccccc-
Confidence 11236789999999999999876 77776654322 110 001111146899999999999999998 43
Q ss_pred CCCCCCCeEEEEEcCCCceEEEeeCCCCCceEEEEec
Q psy948 1503 SGSKPKGKVMVAHNDGRYRRSLVSENLESPSSIALDP 1539 (1576)
Q Consensus 1503 ~~~~~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp 1539 (1576)
.++|.+.+++|+..+.+- --..|.+|+.=.
T Consensus 292 -----~~~V~v~d~~g~~~~~i~--~G~~P~~~~~~~ 321 (328)
T 3dsm_A 292 -----QGIVYRYSPQGKLIDEFY--VGIIPGAFCWKL 321 (328)
T ss_dssp -----EEEEEEECTTCCEEEEEE--EEESEEEEEEEC
T ss_pred -----CCEEEEECCCCCEEEEEE--eccCcceEEEec
Confidence 578999999987665553 235687777643
No 84
>1jrf_A TVA LDL-A module, subgroup A ROUS sarcoma virus receptors PG800 and PG950; disulfide bond, alpha helix, calcium CAGE, signaling protein; NMR {Coturnix japonica} SCOP: g.12.1.1
Probab=98.65 E-value=7.9e-09 Score=84.71 Aligned_cols=38 Identities=45% Similarity=1.240 Sum_probs=35.4
Q ss_pred CCCCCCccccc-----CCceecccccCCCCCCCCCCCCCcccC
Q psy948 749 RQCSESEFQCK-----NGKCIPAQWRCDHDEDCTDGSDEMECG 786 (1576)
Q Consensus 749 ~~C~~~~f~C~-----~g~CI~~~~~CDg~~DC~dgsDE~~C~ 786 (1576)
..|++.+|+|. +++|||..|+|||..||.|||||.+|.
T Consensus 3 ~~C~~~~F~C~~~~~~~~~CIp~~~~CDG~~DC~DgSDE~~C~ 45 (47)
T 1jrf_A 3 SRCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDEWGCG 45 (47)
T ss_dssp CCCCCCCSCSSSCSCCCTTTSGGGGSSSSSCCSSSSCTTHHHH
T ss_pred CCCCCCeeECCCCCCCCCeEcCHhhcCCCCcCCCCCcccccCC
Confidence 46899999998 789999999999999999999999985
No 85
>2i1p_A Low-density lipoprotein receptor-related protein 2; cysteine-rich repeat, ligand binding domain, calcium CAGE, ligand binding protein; NMR {Rattus norvegicus}
Probab=98.64 E-value=7.6e-09 Score=85.04 Aligned_cols=37 Identities=43% Similarity=1.084 Sum_probs=20.5
Q ss_pred CCCCCceecCCC-eEEeCcccCCCCCCCCCCCCCCCcc
Q psy948 548 QCSESEFQCKNG-KCIPAQWRCDHDEDCTDGSDEMECG 584 (1576)
Q Consensus 548 ~C~~~~f~C~~g-~Ci~~~~~CDg~~DC~dgsDE~~C~ 584 (1576)
.|...+|+|.+| +||+.+|+|||+.||.|||||.+|.
T Consensus 6 ~C~~~~F~C~~g~~CI~~~~~CDG~~DC~DgSDE~~C~ 43 (48)
T 2i1p_A 6 NCTSAQFKCADGSSCINSRYRCDGVYDCRDNSDEAGCP 43 (48)
T ss_dssp CCCSSSEECSSSSCEECGGGSSSSSCCSSSSHHHHSSC
T ss_pred CCCCCeeECCCCCEeCCHhhcCCCCCCCCCCcccccCC
Confidence 455555555555 4555555555555555555555554
No 86
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.63 E-value=1.8e-06 Score=101.70 Aligned_cols=84 Identities=11% Similarity=0.051 Sum_probs=62.7
Q ss_pred ccCCcceeeecCCCCeEEEeecCCCCCCCCCeEEEEEcCCC---ceEEEeeCCCCCceEEEEecCCCeEEEEecCC----
Q psy948 1479 SIGKLTAIAVDWIAHNIYWTVSDRSGSKPKGKVMVAHNDGR---YRRSLVSENLESPSSIALDPTLGKMFWAETGA---- 1551 (1576)
Q Consensus 1479 ~~~~p~glAVDwv~~nLYWTD~~~~~~~~~~~I~v~~ldG~---~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~---- 1551 (1576)
.+..|.|||++...+.||+++.. .++|.+..++|. ..+++.. +..|.+|++|+ .|.||.++++.
T Consensus 183 ~~~~p~gia~~~dg~~lyv~d~~------~~~I~~~~~~~~~~~~~~~~~~--~~gP~gi~~d~-~G~l~va~~~~~~~~ 253 (322)
T 2fp8_A 183 ELHVPGGAEVSADSSFVLVAEFL------SHQIVKYWLEGPKKGTAEVLVK--IPNPGNIKRNA-DGHFWVSSSEELDGN 253 (322)
T ss_dssp EESCCCEEEECTTSSEEEEEEGG------GTEEEEEESSSTTTTCEEEEEE--CSSEEEEEECT-TSCEEEEEEEETTSS
T ss_pred CCccCcceEECCCCCEEEEEeCC------CCeEEEEECCCCcCCccceEEe--CCCCCCeEECC-CCCEEEEecCccccc
Confidence 35689999999888889999985 578999999873 2344443 22399999998 58899898761
Q ss_pred -----CCcEEEeecCCCCcEEEEec
Q psy948 1552 -----SPRIESAWMDGSHRSATQIS 1571 (1576)
Q Consensus 1552 -----~~~Iera~mDGs~r~~i~~~ 1571 (1576)
..+|.+.+.+|....+|...
T Consensus 254 ~~~~~~~~v~~~d~~G~~~~~~~~~ 278 (322)
T 2fp8_A 254 MHGRVDPKGIKFDEFGNILEVIPLP 278 (322)
T ss_dssp TTSCEEEEEEEECTTSCEEEEEECC
T ss_pred ccCCCccEEEEECCCCCEEEEEECC
Confidence 35788998888766555543
No 87
>1jrf_A TVA LDL-A module, subgroup A ROUS sarcoma virus receptors PG800 and PG950; disulfide bond, alpha helix, calcium CAGE, signaling protein; NMR {Coturnix japonica} SCOP: g.12.1.1
Probab=98.58 E-value=7.9e-09 Score=84.74 Aligned_cols=38 Identities=45% Similarity=1.240 Sum_probs=32.1
Q ss_pred CCCCCCceecC-----CCeEEeCcccCCCCCCCCCCCCCCCcc
Q psy948 547 RQCSESEFQCK-----NGKCIPAQWRCDHDEDCTDGSDEMECG 584 (1576)
Q Consensus 547 ~~C~~~~f~C~-----~g~Ci~~~~~CDg~~DC~dgsDE~~C~ 584 (1576)
..|...+|+|. +++|||.+|+|||+.||.|||||.+|.
T Consensus 3 ~~C~~~~F~C~~~~~~~~~CIp~~~~CDG~~DC~DgSDE~~C~ 45 (47)
T 1jrf_A 3 SRCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDEWGCG 45 (47)
T ss_dssp CCCCCCCSCSSSCSCCCTTTSGGGGSSSSSCCSSSSCTTHHHH
T ss_pred CCCCCCeeECCCCCCCCCeEcCHhhcCCCCcCCCCCcccccCC
Confidence 35788889998 688999999999999999999998775
No 88
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.56 E-value=2.9e-06 Score=99.26 Aligned_cols=75 Identities=13% Similarity=0.087 Sum_probs=56.7
Q ss_pred ccCCcceeeecCCCCeEEEeecCCCCCCCCCeEEEEEcCC--C--ceEEEeeCCCCCceEEEEecCCCeEEEEecCCCCc
Q psy948 1479 SIGKLTAIAVDWIAHNIYWTVSDRSGSKPKGKVMVAHNDG--R--YRRSLVSENLESPSSIALDPTLGKMFWAETGASPR 1554 (1576)
Q Consensus 1479 ~~~~p~glAVDwv~~nLYWTD~~~~~~~~~~~I~v~~ldG--~--~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~~~~ 1554 (1576)
.+..|.||+.| .++||++++. .++|.+..+++ + .++++. .+..|.+|+||+ .|.||.++++.+ +
T Consensus 167 ~~~~pngis~d--g~~lyv~d~~------~~~I~~~~~~~~g~~~~~~~~~--~~~~P~gi~vd~-dG~l~va~~~~~-~ 234 (306)
T 2p4o_A 167 VFPAANGLKRF--GNFLYVSNTE------KMLLLRIPVDSTDKPGEPEIFV--EQTNIDDFAFDV-EGNLYGATHIYN-S 234 (306)
T ss_dssp CSCSEEEEEEE--TTEEEEEETT------TTEEEEEEBCTTSCBCCCEEEE--ESCCCSSEEEBT-TCCEEEECBTTC-C
T ss_pred CCCcCCCcCcC--CCEEEEEeCC------CCEEEEEEeCCCCCCCccEEEe--ccCCCCCeEECC-CCCEEEEeCCCC-e
Confidence 35578898444 7899999985 58999999874 3 233443 246899999998 589999998755 7
Q ss_pred EEEeecCCCCc
Q psy948 1555 IESAWMDGSHR 1565 (1576)
Q Consensus 1555 Iera~mDGs~r 1565 (1576)
|.+.+.+|+..
T Consensus 235 V~~~~~~G~~~ 245 (306)
T 2p4o_A 235 VVRIAPDRSTT 245 (306)
T ss_dssp EEEECTTCCEE
T ss_pred EEEECCCCCEE
Confidence 99998887643
No 89
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.54 E-value=3.1e-05 Score=91.55 Aligned_cols=123 Identities=14% Similarity=0.080 Sum_probs=78.9
Q ss_pred cceeeecccCCcEEEEeecccceeEEEeeccccccee--eeccc-ceeeeeccCCcceeeecCCCCeEEEeecCCCCCCC
Q psy948 1431 RIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQV--QAGFG-QDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKP 1507 (1576)
Q Consensus 1431 ~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v--~~~~~-~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~ 1507 (1576)
.+..++|++..+.||.++...+.|....++... +.+ ..... ..........|.+||+++.++.||.++..
T Consensus 188 ~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~------ 260 (347)
T 3hfq_A 188 GPRHLVFSPDGQYAFLAGELSSQIASLKYDTQT-GAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRG------ 260 (347)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEEETTT-TEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEET------
T ss_pred CCceEEECCCCCEEEEEeCCCCEEEEEEecCCC-CceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCC------
Confidence 456788999888899988888887666655311 111 10000 00000112458889999999999999874
Q ss_pred CCeEEEEEcC--CCceEE-EeeCCCCCceEEEEecCCCeEEEEecCCCCcEEEeecC
Q psy948 1508 KGKVMVAHND--GRYRRS-LVSENLESPSSIALDPTLGKMFWAETGASPRIESAWMD 1561 (1576)
Q Consensus 1508 ~~~I~v~~ld--G~~~~~-lv~~~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~mD 1561 (1576)
.++|.+.+++ |+...+ .+......|++|+++|...+||.+..+.. .|....+|
T Consensus 261 ~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~-~v~v~~~d 316 (347)
T 3hfq_A 261 YNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTD-NATLYARD 316 (347)
T ss_dssp TTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTT-EEEEEEEC
T ss_pred CCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCC-cEEEEEEe
Confidence 4789999886 322211 12233567999999999889999987643 55555444
No 90
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.54 E-value=5.2e-05 Score=88.66 Aligned_cols=124 Identities=9% Similarity=0.034 Sum_probs=77.1
Q ss_pred cceeeecccCCcEEEEeecccceeEEEeecccccc-eeeeccc-ceeeeeccCCcceeeecCCCCeEEEeecCCCCCCCC
Q psy948 1431 RIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKG-QVQAGFG-QDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPK 1508 (1576)
Q Consensus 1431 ~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~-~v~~~~~-~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~ 1508 (1576)
.+..++|++..+.||++....+.|....++..... ....... ..........|.+|++++.++.||.+... .
T Consensus 179 ~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~------~ 252 (343)
T 1ri6_A 179 GPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRT------A 252 (343)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETT------T
T ss_pred CcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecC------C
Confidence 45678889988899999877888877666432111 1010000 00001113356679999988899988754 4
Q ss_pred CeEEEEEcC--CCceEEEee-CCCCCceEEEEecCCCeEEEEecCCCCcEEEeecC
Q psy948 1509 GKVMVAHND--GRYRRSLVS-ENLESPSSIALDPTLGKMFWAETGASPRIESAWMD 1561 (1576)
Q Consensus 1509 ~~I~v~~ld--G~~~~~lv~-~~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~mD 1561 (1576)
+.|.+.+++ +...+.+.. .....|.+|+++|...+||.+..+.. .|....+|
T Consensus 253 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~-~v~v~~~d 307 (343)
T 1ri6_A 253 SLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSH-HISVYEIV 307 (343)
T ss_dssp TEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTC-EEEEEEEE
T ss_pred CEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCCCC-eEEEEEEc
Confidence 789999887 433333321 22234999999999888999885432 45554444
No 91
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=98.50 E-value=2.8e-08 Score=93.30 Aligned_cols=68 Identities=37% Similarity=0.891 Sum_probs=57.3
Q ss_pred ccccccCCCcceeeccCCceeccCCCccccCCCCccCCCCccc-cccccCCCceEEEcCCCcEecCCCCCce
Q psy948 1325 HCMNITGGSGYLCTCYQGFIIDKNNAKKCLDVDECATGIHHCS-QVCTNLNGTYACSCNAGFTLSDGLSGVC 1395 (1576)
Q Consensus 1325 ~c~n~~g~~~~~C~C~~G~~~~~~~~~~c~d~neC~~~~~~Cs-~lC~n~~gsy~C~Cp~G~~l~d~~~~~C 1395 (1576)
.|.|+.++ |+|.|++||.+....++.|++++||..+++.|. +.|+|++|+|+|.|++||+|..+.+ +|
T Consensus 17 ~C~n~~g~--y~C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~~~-~C 85 (86)
T 1lmj_A 17 QCVNTPGD--FECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNIS-AC 85 (86)
T ss_dssp CEEEETTE--EEECCCSSEEECTTTSSSEEECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCCSSSC-CC
T ss_pred EEECCCCC--EEeeCCCCcCccCCCCCccCCcccccCCCCcCCCCEeEcCCCCEEEECcCCcccCCCCC-cc
Confidence 68888876 999999999976445688999999998777786 6999999999999999999975443 45
No 92
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.47 E-value=3.6e-05 Score=89.40 Aligned_cols=248 Identities=9% Similarity=0.050 Sum_probs=149.5
Q ss_pred cccccCCcceEEEeCCcceEEEecCCCcCeEEEEecCCCCcEEEEeccCCCCCcceEEEeccCCeEEEEcCCCCeEEEEe
Q psy948 1190 LKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVD 1269 (1576)
Q Consensus 1190 l~~~l~~P~~iavdP~~g~lywtd~g~~~~I~ra~mdGs~~~~iv~~~~~l~~P~gLaiD~~~~rlYw~D~~~~~I~s~~ 1269 (1576)
+.....-+.+++.+|..+.|||+|.. ..+|.+...++...+.+ . .-..|.+|+++...+ ||.+. .+.|..++
T Consensus 8 ~~~~~~~~Egp~w~~~~~~l~~~d~~-~~~i~~~d~~~~~~~~~-~---~~~~~~~i~~~~dG~-l~v~~--~~~l~~~d 79 (297)
T 3g4e_A 8 LPENCRCGESPVWEEVSNSLLFVDIP-AKKVCRWDSFTKQVQRV-T---MDAPVSSVALRQSGG-YVATI--GTKFCALN 79 (297)
T ss_dssp ECCCCSBEEEEEEETTTTEEEEEETT-TTEEEEEETTTCCEEEE-E---CSSCEEEEEEBTTSS-EEEEE--TTEEEEEE
T ss_pred eccCCccccCCeEECCCCEEEEEECC-CCEEEEEECCCCcEEEE-e---CCCceEEEEECCCCC-EEEEE--CCeEEEEE
Confidence 34566778899999999999999975 45888888887654333 2 236789999986554 76665 46788888
Q ss_pred CCCCceEEEEeC---CCccceeEEeee-CCeEEEeccCCCcceeeccccccccccceecccccccCCCcceeeccCCcee
Q psy948 1270 LDGKHKHIVISG---QKVPHVFALTLF-EDHIYWTDWNTKSINRADKFNAREIQAGILHHCMNITGGSGYLCTCYQGFII 1345 (1576)
Q Consensus 1270 ~dG~~r~~v~~~---~~~~~P~~lavf-ed~lYwtd~~~~~i~~~~k~~~~~~~~~~~~~c~n~~g~~~~~C~C~~G~~~ 1345 (1576)
+++...+.+... .....|..+++. .+.+|++++...... ..
T Consensus 80 ~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~----------------------------------~~- 124 (297)
T 3g4e_A 80 WKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAP----------------------------------AV- 124 (297)
T ss_dssp TTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBT----------------------------------TB-
T ss_pred CCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCccccc----------------------------------cc-
Confidence 775554444332 123345556654 335555432211000 00
Q ss_pred ccCCCccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceeccCCceEEEEecCCceeeecccccccccc
Q psy948 1346 DKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKANDNKLTIVYSNGPEIRAYETHKRRFRDV 1425 (1576)
Q Consensus 1346 ~~~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~~~~~~ll~s~~~~Ir~i~~~~~~~~~~ 1425 (1576)
... . ...|+++.... ....+
T Consensus 125 -----------------------------------------~~~----------~--------~~~l~~~d~~g-~~~~~ 144 (297)
T 3g4e_A 125 -----------------------------------------LER----------H--------QGALYSLFPDH-HVKKY 144 (297)
T ss_dssp -----------------------------------------CCT----------T--------CEEEEEECTTS-CEEEE
T ss_pred -----------------------------------------ccC----------C--------CcEEEEEECCC-CEEEE
Confidence 000 0 00011111100 00111
Q ss_pred ccccccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeee-ccCCcceeeecCCCCeEEEeecCCCC
Q psy948 1426 ISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIK-SIGKLTAIAVDWIAHNIYWTVSDRSG 1504 (1576)
Q Consensus 1426 v~~~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~-~~~~p~glAVDwv~~nLYWTD~~~~~ 1504 (1576)
......+.+|++++..+.|||++...+.|++..++... +.+... .....+. ..+.|.|||+|.. ++||.+...
T Consensus 145 ~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~-G~~~~~-~~~~~~~~~~~~p~g~~~d~~-G~lwva~~~--- 218 (297)
T 3g4e_A 145 FDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQT-GQISNR-RSVYKLEKEEQIPDGMCIDAE-GKLWVACYN--- 218 (297)
T ss_dssp EEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTT-CCEEEE-EEEEECCGGGCEEEEEEEBTT-SCEEEEEET---
T ss_pred eeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCC-CcccCc-EEEEECCCCCCCCCeeEECCC-CCEEEEEcC---
Confidence 12233467888999899999999999999988764211 111100 0000111 2357999999965 589988764
Q ss_pred CCCCCeEEEEEcC-CCceEEEeeCCCCCceEEEEe-cCCCeEEEEecC
Q psy948 1505 SKPKGKVMVAHND-GRYRRSLVSENLESPSSIALD-PTLGKMFWAETG 1550 (1576)
Q Consensus 1505 ~~~~~~I~v~~ld-G~~~~~lv~~~l~~P~~IavD-p~~G~LYWTD~g 1550 (1576)
.++|.+.+++ |+...++ .....+|.++++. |..+.||.|...
T Consensus 219 ---~~~v~~~d~~tG~~~~~i-~~p~~~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 219 ---GGRVIRLDPVTGKRLQTV-KLPVDKTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp ---TTEEEEECTTTCCEEEEE-ECSSSBEEEEEEESGGGCEEEEEEBC
T ss_pred ---CCEEEEEcCCCceEEEEE-ECCCCCceEEEEeCCCCCEEEEEcCC
Confidence 4689999987 7655544 3445789999998 888899999864
No 93
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.45 E-value=6.6e-05 Score=86.74 Aligned_cols=259 Identities=15% Similarity=0.129 Sum_probs=148.5
Q ss_pred CCCCCcceEEEeccCCeEEEEcCCCCeEEEEeCCCCceEEEEeCCCccceeEEeee-CCeEEEeccCCCcceeecccccc
Q psy948 1238 DDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLF-EDHIYWTDWNTKSINRADKFNAR 1316 (1576)
Q Consensus 1238 ~~l~~P~gLaiD~~~~rlYw~D~~~~~I~s~~~dG~~r~~v~~~~~~~~P~~lavf-ed~lYwtd~~~~~i~~~~k~~~~ 1316 (1576)
....+|.|++.|...++|||++.....|...+.++. .+.+.. ....|.+|++. .+.+|+++.....|.+.+..+++
T Consensus 25 ~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~--~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~ 101 (296)
T 3e5z_A 25 DGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEMH--PSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGE 101 (296)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEES--SCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCC
T ss_pred cCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEEC--CCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCc
Confidence 367899999999999899999999999999999988 444432 34568899985 56788888877788877764443
Q ss_pred ccccceecccccccCCCcceeeccCCceeccCCCccccCCCCccCCCCccccccccCCCceEEEcCCCcEec-CCCCCce
Q psy948 1317 EIQAGILHHCMNITGGSGYLCTCYQGFIIDKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLS-DGLSGVC 1395 (1576)
Q Consensus 1317 ~~~~~~~~~c~n~~g~~~~~C~C~~G~~~~~~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~-d~~~~~C 1395 (1576)
...... ... +.... .-..+.+. |.|.... +...++-
T Consensus 102 ~~~~~~------~~~----------~~~~~------------------~~~~i~~d---------~~G~l~vtd~~~g~~ 138 (296)
T 3e5z_A 102 WESIAD------SFE----------GKKLN------------------SPNDVCLA---------PDGSLWFSDPTYGID 138 (296)
T ss_dssp EEEEEC------EET----------TEECC------------------CCCCEEEC---------TTSCEEEEECSHHHH
T ss_pred EEEEee------ccC----------CCCCC------------------CCCCEEEC---------CCCCEEEECCccccc
Confidence 211000 000 00000 00000000 1111100 0000000
Q ss_pred eccCCceEEEEecCCceeeeccccccccccccccccceeeecccCCcEEEEeecccceeEEEeeccccccee-eecccce
Q psy948 1396 KANDNKLTIVYSNGPEIRAYETHKRRFRDVISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQV-QAGFGQD 1474 (1576)
Q Consensus 1396 ~~~~~~~~ll~s~~~~Ir~i~~~~~~~~~~v~~~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v-~~~~~~~ 1474 (1576)
................|+++... ..+..+......+.+|++++..+.| |++...+.|++..+... +.+ .. ...
T Consensus 139 ~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~--g~~~~~--~~~ 212 (296)
T 3e5z_A 139 KPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAFLPSGNLL-VSDTGDNATHRYCLNAR--GETEYQ--GVH 212 (296)
T ss_dssp CGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEEEECTTSCEE-EEETTTTEEEEEEECSS--SCEEEE--EEE
T ss_pred cccccccccccCCCcEEEEECCC-CCEEEeecCCCCCccEEECCCCCEE-EEeCCCCeEEEEEECCC--CcCcCC--CeE
Confidence 00000000000001234444333 2222223344567789999888888 99999999998877521 111 00 011
Q ss_pred eeeeccCCcceeeecCCCCeEEEeecCCCCCCCCCeEEEEEcCCCceEEEeeCCCCCceEEEEe-cCCCeEEEEecCCCC
Q psy948 1475 LGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPKGKVMVAHNDGRYRRSLVSENLESPSSIALD-PTLGKMFWAETGASP 1553 (1576)
Q Consensus 1475 ~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavD-p~~G~LYWTD~g~~~ 1553 (1576)
+ ....+.|.+||+|.. ++||.+. + +.|.+.+.+|+..+.+-. ... |.++++. |..++||.+..+
T Consensus 213 ~-~~~~~~p~~i~~d~~-G~l~v~~-~-------~~v~~~~~~g~~~~~~~~-~~~-~~~~~f~~~d~~~L~v~t~~--- 277 (296)
T 3e5z_A 213 F-TVEPGKTDGLRVDAG-GLIWASA-G-------DGVHVLTPDGDELGRVLT-PQT-TSNLCFGGPEGRTLYMTVST--- 277 (296)
T ss_dssp E-CCSSSCCCSEEEBTT-SCEEEEE-T-------TEEEEECTTSCEEEEEEC-SSC-CCEEEEESTTSCEEEEEETT---
T ss_pred e-eCCCCCCCeEEECCC-CCEEEEc-C-------CeEEEECCCCCEEEEEEC-CCC-ceeEEEECCCCCEEEEEcCC---
Confidence 1 113467999999964 5788776 2 579999999876555542 333 9999995 666789888754
Q ss_pred cEEEeecCCC
Q psy948 1554 RIESAWMDGS 1563 (1576)
Q Consensus 1554 ~Iera~mDGs 1563 (1576)
.|.|..+...
T Consensus 278 ~l~~~~~~~~ 287 (296)
T 3e5z_A 278 EFWSIETNVR 287 (296)
T ss_dssp EEEEEECSCC
T ss_pred eEEEEEcccc
Confidence 6888887644
No 94
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.45 E-value=9.3e-06 Score=97.21 Aligned_cols=125 Identities=13% Similarity=0.173 Sum_probs=77.6
Q ss_pred cccccceeeecccCCcEEEEeecccc---eeEEEeecccccc-------------ee-------eecccc-eeeeeccCC
Q psy948 1427 SDERRIEALDIDPVDEIIYWVDSYDR---NIRRSFMLEAQKG-------------QV-------QAGFGQ-DLGIKSIGK 1482 (1576)
Q Consensus 1427 ~~~~~i~ald~D~~~~~vYWsD~~~~---~I~r~~l~~~~~~-------------~v-------~~~~~~-~~~~~~~~~ 1482 (1576)
...+++.+|+||+.++.||.+|.... .|.++.. +.+.+ .+ ..+... .+.+.....
T Consensus 194 ~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~-G~nyGwp~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~a 272 (353)
T 2g8s_A 194 YGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQK-GKNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDSPA 272 (353)
T ss_dssp ECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCT-TCBCCTTTBCSSBCTTSSCCTTCCBSSCTTSCCCSEEESSCCC
T ss_pred EcCcCccceEEECCCCCEEEEecCCCCCcEEeEecc-CCcCCCCCccCCCCCCCCccCcccCCCCCCccCCeEEeCCCcC
Confidence 35678999999998999999998754 4544321 11100 00 000000 011112246
Q ss_pred cceeeecC------CCCeEEEeecCCCCCCCCCeEEEEEcCCCc---eEEEeeCCCCCceEEEEecCCCeEEEEecCCCC
Q psy948 1483 LTAIAVDW------IAHNIYWTVSDRSGSKPKGKVMVAHNDGRY---RRSLVSENLESPSSIALDPTLGKMFWAETGASP 1553 (1576)
Q Consensus 1483 p~glAVDw------v~~nLYWTD~~~~~~~~~~~I~v~~ldG~~---~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~~~ 1553 (1576)
|.||+|.. ..++||.++.. .++|.+..+++.. ...++......|++|+++|. |.||.++.....
T Consensus 273 p~G~~~y~g~~fp~~~g~l~v~~~~------~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pd-G~lyv~td~~~g 345 (353)
T 2g8s_A 273 VSGMAFYNSDKFPQWQQKLFIGALK------DKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPD-GYLYVLTDESSG 345 (353)
T ss_dssp EEEEEEECCSSSGGGTTEEEEEETT------TTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTT-SCEEEEECSTTE
T ss_pred cceeEEECCccCcccCCcEEEEEcc------CCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCC-CcEEEEEeCCCC
Confidence 88999963 24789999874 5789999887642 12334333568999999985 889997443445
Q ss_pred cEEEee
Q psy948 1554 RIESAW 1559 (1576)
Q Consensus 1554 ~Iera~ 1559 (1576)
+|.|..
T Consensus 346 ~I~ri~ 351 (353)
T 2g8s_A 346 ELLKVS 351 (353)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 788864
No 95
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.44 E-value=7.4e-05 Score=88.87 Aligned_cols=306 Identities=12% Similarity=0.074 Sum_probs=160.8
Q ss_pred CcceEEEeCCcceEEEecCCC--cCeEEEEecCCCC--cEEEEeccCCCCCcceEEEeccCCeEEEEcCC---CCeEEEE
Q psy948 1196 DPRGITLHPGIGYVYFSSWNL--QAYIGKIGMDGSN--FTRILTHEDDIAWPNALTLDYFTERLYWADAH---LDYIASV 1268 (1576)
Q Consensus 1196 ~P~~iavdP~~g~lywtd~g~--~~~I~ra~mdGs~--~~~iv~~~~~l~~P~gLaiD~~~~rlYw~D~~---~~~I~s~ 1268 (1576)
+|..++..+..-+||...+.. ...|....+|... .+.+.. . ....|.+|+++...++||.+... ...|...
T Consensus 3 ~p~~~~~~~~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~-~-~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~ 80 (361)
T 3scy_A 3 QPTDPSTTDSELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSD-A-EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAF 80 (361)
T ss_dssp ---CCCGGGGEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEE-E-ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEE
T ss_pred CCCChhhCCCceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeec-c-cCCCCceEEECCCCCEEEEEEccCCCCCcEEEE
Confidence 566666667677777766532 3466666665432 222222 2 67899999999999999999983 4677666
Q ss_pred eCCCC--ceEEEEe-CCCccceeEEeeeCCeEEEeccCCCcceeeccccccccccceecccccccCCCcceeeccCCcee
Q psy948 1269 DLDGK--HKHIVIS-GQKVPHVFALTLFEDHIYWTDWNTKSINRADKFNAREIQAGILHHCMNITGGSGYLCTCYQGFII 1345 (1576)
Q Consensus 1269 ~~dG~--~r~~v~~-~~~~~~P~~lavfed~lYwtd~~~~~i~~~~k~~~~~~~~~~~~~c~n~~g~~~~~C~C~~G~~~ 1345 (1576)
.++.. ..+.+.. ......|..+++.+.+||.++...+.|...+......+...... ....+. + .
T Consensus 81 ~~~~~~g~~~~~~~~~~~~~~p~~~~~dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~--~~~~g~---------~--~ 147 (361)
T 3scy_A 81 AFDKEKGTLHLLNTQKTMGADPCYLTTNGKNIVTANYSGGSITVFPIGQDGALLPASDV--IEFKGS---------G--P 147 (361)
T ss_dssp EEETTTTEEEEEEEEECSSSCEEEEEECSSEEEEEETTTTEEEEEEBCTTSCBCSCSEE--EECCCC---------C--S
T ss_pred EEeCCCCcEEEeeEeccCCCCcEEEEECCCEEEEEECCCCEEEEEEeCCCCcCccccee--EEccCC---------C--C
Confidence 66543 2222222 22345788888877789998877766655443222111100000 000000 0 0
Q ss_pred ccCCCccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceeccCCceEEEEecCCceeeecccccc----
Q psy948 1346 DKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKANDNKLTIVYSNGPEIRAYETHKRR---- 1421 (1576)
Q Consensus 1346 ~~~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~~~~~~ll~s~~~~Ir~i~~~~~~---- 1421 (1576)
... .+ .......+.+. |+|-. +++.......|+.+.+....
T Consensus 148 ~~~--~~---------~~~~~~~~~~s---------pdg~~---------------l~~~~~~~~~v~v~~~~~~~~~~~ 192 (361)
T 3scy_A 148 DKE--RQ---------TMPHLHCVRIT---------PDGKY---------------LLADDLGTDQIHKFNINPNANADN 192 (361)
T ss_dssp CTT--TC---------SSCCEEEEEEC---------TTSSE---------------EEEEETTTTEEEEEEECTTCCTTT
T ss_pred Ccc--cc---------CCCcceEEEEC---------CCCCE---------------EEEEeCCCCEEEEEEEcCCCCccc
Confidence 000 00 00000001111 12211 11111111222222222111
Q ss_pred ---c-------cccccccccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCC
Q psy948 1422 ---F-------RDVISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWI 1491 (1576)
Q Consensus 1422 ---~-------~~~v~~~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv 1491 (1576)
+ ...+.....+..++|++..+.||.++...+.|....+.......+.. ..........|.+|++++.
T Consensus 193 ~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~---~~~~~~~~~~~~~i~~spd 269 (361)
T 3scy_A 193 KEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQT---VAADTVNAQGSGDIHLSPD 269 (361)
T ss_dssp CCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEE---EESCSSCCCCEEEEEECTT
T ss_pred ccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEE---EecCCCCCCCcccEEECCC
Confidence 1 01112234567889999999999998878888776665321111110 0011112345779999999
Q ss_pred CCeEEEeecCCCCCCCCCeEEEEEcC---CCceEE-EeeCCCCCceEEEEecCCCeEEEEecCCCCcEEEeecC
Q psy948 1492 AHNIYWTVSDRSGSKPKGKVMVAHND---GRYRRS-LVSENLESPSSIALDPTLGKMFWAETGASPRIESAWMD 1561 (1576)
Q Consensus 1492 ~~nLYWTD~~~~~~~~~~~I~v~~ld---G~~~~~-lv~~~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~mD 1561 (1576)
++.||.++... .++|.+.+++ |+...+ .+.. -..|++|+++|...+||.+..... .|....+|
T Consensus 270 g~~l~v~~~~~-----~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~-~v~v~~~d 336 (361)
T 3scy_A 270 GKYLYASNRLK-----ADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTN-VIQIFERD 336 (361)
T ss_dssp SSEEEEEECSS-----SCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTT-EEEEEEEC
T ss_pred CCEEEEECCCC-----CCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCC-CEEEEEEE
Confidence 99999987630 2678888875 332221 1223 468999999999889999985433 56555455
No 96
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=98.44 E-value=3.7e-07 Score=93.45 Aligned_cols=55 Identities=31% Similarity=0.819 Sum_probs=43.4
Q ss_pred ccccccCCCcceeeccCCceeccCCCcccc-CCCCccCCCCccc--cccccCCCceEEEcCCCcEec
Q psy948 1325 HCMNITGGSGYLCTCYQGFIIDKNNAKKCL-DVDECATGIHHCS--QVCTNLNGTYACSCNAGFTLS 1388 (1576)
Q Consensus 1325 ~c~n~~g~~~~~C~C~~G~~~~~~~~~~c~-d~neC~~~~~~Cs--~lC~n~~gsy~C~Cp~G~~l~ 1388 (1576)
.|.++.++ |+|.|++||.. ..|. ++++|.. ..|. +.|+++.++|+|.|++||++.
T Consensus 58 ~C~~~~g~--~~C~C~~G~~G-----~~C~~~~~~C~~--~~C~~~g~C~~~~g~~~C~C~~G~~G~ 115 (135)
T 2vj3_A 58 TCLDQIGE--FQCICMPGYEG-----VHCEVNTDECAS--SPCLHNGRCLDKINEFQCECPTGFTGH 115 (135)
T ss_dssp EEEECSSC--EEEECCTTEES-----SSSCEECCTTTT--CCSTTTCEEEECSSCEEEECCTTEESS
T ss_pred EEeCCCCC--ceeeCCCCCcC-----CcceecCCcccC--CCcCCCCEeECCCCCeEEECCCCCcCC
Confidence 35555554 99999999973 4564 7899985 4564 689999999999999999863
No 97
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=98.42 E-value=1e-07 Score=103.41 Aligned_cols=58 Identities=28% Similarity=0.726 Sum_probs=47.0
Q ss_pred cccCCCcceeeccCCceeccCCCccccCC--CCccCCCCcc---ccccccCCCceEEEcCCCcEecCC
Q psy948 1328 NITGGSGYLCTCYQGFIIDKNNAKKCLDV--DECATGIHHC---SQVCTNLNGTYACSCNAGFTLSDG 1390 (1576)
Q Consensus 1328 n~~g~~~~~C~C~~G~~~~~~~~~~c~d~--neC~~~~~~C---s~lC~n~~gsy~C~Cp~G~~l~d~ 1390 (1576)
++.++ |+|.|++||.+....+..|+++ ++|.. .| .++|+|++|+|+|.|++||++...
T Consensus 111 ~~~g~--~~C~C~~Gy~g~~~~~~~C~~~~~~~C~~---~C~~~~~~C~n~~g~y~C~C~~G~~g~~~ 173 (186)
T 1z1y_A 111 SEIQS--AGCSCAIGXVPNPEDEXXCTXTGETACQL---XCNTDNEVCXNVEGVYXCQCMEGFTFDXE 173 (186)
T ss_dssp TTEEE--EEEEECTEEEEETTTTTEEEEEECCCCCC---CCCTTTEEEEEETTEEEEEECTTCEEETT
T ss_pred CCCCC--ceEECCCCCcccCCCCCcceEcCCCcccc---cccccCcceecCCCCeeeECCCCCccCcc
Confidence 44444 9999999999865446788875 89973 67 579999999999999999999743
No 98
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.41 E-value=1.9e-05 Score=91.84 Aligned_cols=120 Identities=17% Similarity=0.159 Sum_probs=81.3
Q ss_pred cceeeecccCCcEEEEeecc-----------cceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEee
Q psy948 1431 RIEALDIDPVDEIIYWVDSY-----------DRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTV 1499 (1576)
Q Consensus 1431 ~i~ald~D~~~~~vYWsD~~-----------~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD 1499 (1576)
.+..+.+|+. ++||+++.. .+.|+++..++. + ......+..|.|||++...+.|||++
T Consensus 99 ~~~di~~d~d-G~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~----~------~~~~~~~~~pngi~~spdg~~lyv~~ 167 (297)
T 3g4e_A 99 RFNDGKVDPA-GRYFAGTMAEETAPAVLERHQGALYSLFPDHH----V------KKYFDQVDISNGLDWSLDHKIFYYID 167 (297)
T ss_dssp EEEEEEECTT-SCEEEEEEECCSBTTBCCTTCEEEEEECTTSC----E------EEEEEEESBEEEEEECTTSCEEEEEE
T ss_pred CCCCEEECCC-CCEEEecCCcccccccccCCCcEEEEEECCCC----E------EEEeeccccccceEEcCCCCEEEEec
Confidence 4566777774 457776642 346777654321 1 11234456899999999899999999
Q ss_pred cCCCCCCCCCeEEEEEcC---CCc--eEEEee--CCCCCceEEEEecCCCeEEEEecCCCCcEEEeecC-CCCcEEEE
Q psy948 1500 SDRSGSKPKGKVMVAHND---GRY--RRSLVS--ENLESPSSIALDPTLGKMFWAETGASPRIESAWMD-GSHRSATQ 1569 (1576)
Q Consensus 1500 ~~~~~~~~~~~I~v~~ld---G~~--~~~lv~--~~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~mD-Gs~r~~i~ 1569 (1576)
+. .++|.+.+++ |.. +++++. .....|.+|++|+. |.||.+.++.. +|.|.+.+ |.....|.
T Consensus 168 ~~------~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~-G~lwva~~~~~-~v~~~d~~tG~~~~~i~ 237 (297)
T 3g4e_A 168 SL------SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAE-GKLWVACYNGG-RVIRLDPVTGKRLQTVK 237 (297)
T ss_dssp GG------GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTT-SCEEEEEETTT-EEEEECTTTCCEEEEEE
T ss_pred CC------CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCC-CCEEEEEcCCC-EEEEEcCCCceEEEEEE
Confidence 85 5789999864 432 344443 22357999999976 89999998644 79999987 76554443
No 99
>2gtl_N Extracellular hemoglobin linker L2 subunit; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=98.40 E-value=1.5e-07 Score=100.16 Aligned_cols=56 Identities=29% Similarity=0.639 Sum_probs=48.5
Q ss_pred CCCCCCceecC--CCeEEeCcccCCCCCCCCCCCCCC--Ccccc-cccCCce--ecCCCceec
Q psy948 547 RQCSESEFQCK--NGKCIPAQWRCDHDEDCTDGSDEM--ECGGF-QCKNGTF--QCSSGHCIA 602 (1576)
Q Consensus 547 ~~C~~~~f~C~--~g~Ci~~~~~CDg~~DC~dgsDE~--~C~~~-~C~~~~f--~C~~g~Ci~ 602 (1576)
..|...+|+|. +|+|||..|+|||..||.|||||. +|... +|.+.+| +|..+.|+.
T Consensus 51 ~~C~~~eFqC~~~~g~CIp~~wvCDG~~DC~DGSDE~~~~C~~~~tc~~~qF~g~~~~d~C~k 113 (220)
T 2gtl_N 51 THCEKRTFQCGGNEQECISDLLVCDGHKDCHNAHDEDPDVCDTSVVKAGNVFSGTSTWHGCLA 113 (220)
T ss_dssp CSSCTTEEECCSSSCCEEETTTTTSSSCCSTTCTTSCGGGGCGGGGCTTCEEEEEEEECSSCC
T ss_pred CCCCCCccCcCCCCCcEeCcceecCCCCCCCCCCccCcccCCCCCccCCcceeeEecCChhhc
Confidence 57999999995 689999999999999999999996 89887 8887776 477777764
No 100
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.37 E-value=7.8e-05 Score=87.50 Aligned_cols=256 Identities=9% Similarity=0.075 Sum_probs=144.0
Q ss_pred CCCCCcceEEEeccCCeEEEEcCCCCeEEEEeCCCCceEEEEeCCCccceeEEeee-CCeEEEeccCC----Ccceeecc
Q psy948 1238 DDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLF-EDHIYWTDWNT----KSINRADK 1312 (1576)
Q Consensus 1238 ~~l~~P~gLaiD~~~~rlYw~D~~~~~I~s~~~dG~~r~~v~~~~~~~~P~~lavf-ed~lYwtd~~~----~~i~~~~k 1312 (1576)
....+|.++++| ..++|||++.....|...+.++...+.+... ....|.+|++. .+.+|++.... ..|.+++.
T Consensus 42 ~~~~~~~~~~~~-~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~ 119 (333)
T 2dg1_A 42 KKGLQLEGLNFD-RQGQLFLLDVFEGNIFKINPETKEIKRPFVS-HKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATE 119 (333)
T ss_dssp SSCCCEEEEEEC-TTSCEEEEETTTCEEEEECTTTCCEEEEEEC-SSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECT
T ss_pred ccCccccCcEEC-CCCCEEEEECCCCEEEEEeCCCCcEEEEeeC-CCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeC
Confidence 356789999999 4667999999889999999887665544321 23568888885 55788877655 45655554
Q ss_pred ccccccccceecccccccCCCcceeeccCCceeccCCCccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCC
Q psy948 1313 FNAREIQAGILHHCMNITGGSGYLCTCYQGFIIDKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLS 1392 (1576)
Q Consensus 1313 ~~~~~~~~~~~~~c~n~~g~~~~~C~C~~G~~~~~~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~ 1392 (1576)
-++..... .. . .. .+. .-..+-+. |.|
T Consensus 120 ~~~~~~~~-~~----~-~~---------~~~---------------------~~~~i~~d---------~~g-------- 146 (333)
T 2dg1_A 120 NGDNLQDI-IE----D-LS---------TAY---------------------CIDDMVFD---------SKG-------- 146 (333)
T ss_dssp TSCSCEEE-EC----S-SS---------SCC---------------------CEEEEEEC---------TTS--------
T ss_pred CCCEEEEE-Ec----c-Cc---------cCC---------------------cccceEEC---------CCC--------
Confidence 33221100 00 0 00 000 00000000 011
Q ss_pred CceeccCCceEEEEec------CCceeeeccccccccccccccccceeeecccCCcEEEEeecccceeEEEeeccccc-c
Q psy948 1393 GVCKANDNKLTIVYSN------GPEIRAYETHKRRFRDVISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQK-G 1465 (1576)
Q Consensus 1393 ~~C~~~~~~~~ll~s~------~~~Ir~i~~~~~~~~~~v~~~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~-~ 1465 (1576)
.+++.... ...|+.+...+..+..+......+.+|++++..+.||+++...+.|++..+..... .
T Consensus 147 --------~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~ 218 (333)
T 2dg1_A 147 --------GFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTI 218 (333)
T ss_dssp --------CEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSE
T ss_pred --------CEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCc
Confidence 11111000 12334443332222222222345678889988889999998888998887742111 1
Q ss_pred eeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCCCCeEEEEEcCCCceEEEeeCC-----CCCceEEEEecC
Q psy948 1466 QVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPKGKVMVAHNDGRYRRSLVSEN-----LESPSSIALDPT 1540 (1576)
Q Consensus 1466 ~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~~~I~v~~ldG~~~~~lv~~~-----l~~P~~IavDp~ 1540 (1576)
.... ......+.+...|.+|++|.. ++||.+... .+.|.+.+++|+..+.+-... +..|.+|+++|.
T Consensus 219 ~~~~-~~~~~~~~~~~~~~~i~~d~~-G~l~v~~~~------~~~v~~~d~~g~~~~~~~~~~~~~g~~~~~~~~~~~~d 290 (333)
T 2dg1_A 219 QPFG-ATIPYYFTGHEGPDSCCIDSD-DNLYVAMYG------QGRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPG 290 (333)
T ss_dssp EEEE-EEEEEECCSSSEEEEEEEBTT-CCEEEEEET------TTEEEEECTTSCEEEEEECTTGGGTCSCBCCEEEECTT
T ss_pred cccc-ceEEEecCCCCCCCceEECCC-CCEEEEEcC------CCEEEEECCCCCEEEEEEcCCCccccccCcceEEECCC
Confidence 1000 000001112247899999964 678888753 468999998887555543221 227999999987
Q ss_pred CCeEEEEecCC----CCcEEEeecCCCC
Q psy948 1541 LGKMFWAETGA----SPRIESAWMDGSH 1564 (1576)
Q Consensus 1541 ~G~LYWTD~g~----~~~Iera~mDGs~ 1564 (1576)
.++||.+.... ...|.+..++...
T Consensus 291 g~~L~v~~~~g~~~~~~~l~~~~~~~~g 318 (333)
T 2dg1_A 291 TNQLIICSNDIEMGGGSMLYTVNGFAKG 318 (333)
T ss_dssp SCEEEEEEECGGGTCCEEEEEEECSSCB
T ss_pred CCEEEEEeCccCCCCCceEEEEecccCc
Confidence 77999887542 2367777766543
No 101
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=98.34 E-value=1e-07 Score=93.16 Aligned_cols=68 Identities=38% Similarity=0.909 Sum_probs=24.4
Q ss_pred eecccccccCCCcceeeccCCceeccCCCccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCce
Q psy948 1322 ILHHCMNITGGSGYLCTCYQGFIIDKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVC 1395 (1576)
Q Consensus 1322 ~~~~c~n~~g~~~~~C~C~~G~~~~~~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C 1395 (1576)
+.+.|.++.++ |.|+|++||.+. .++.|+++|||.. +++|++.|+|++|+|+|.|++||+|..+.+ +|
T Consensus 39 C~~~C~n~~g~--y~C~C~~Gy~g~--~g~~C~dideC~~-~~~C~~~C~n~~gsy~C~C~~Gy~~~~d~~-~C 106 (107)
T 2w2n_E 39 CSYVCNDLKIG--YECLCPDGFQLV--AQRRCEDIDECQD-PDTCSQLCVNLEGGYKCQCEEGFQLDPHTK-AC 106 (107)
T ss_dssp CSSEEECCSBS--CEEECCTTCEEE--TTTEEEC----------------------------------------
T ss_pred CCCEeEeCCCC--eEEECCCCcccc--CCCccccccccCC-CCCcCCeeecCCCCEEEECCCCceECCCCC-cc
Confidence 34578888876 999999999985 3578999999984 578999999999999999999999975433 45
No 102
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.34 E-value=1.9e-05 Score=94.03 Aligned_cols=86 Identities=9% Similarity=0.035 Sum_probs=59.5
Q ss_pred CcceeeecCCCCeEEEeecCCCCCCCCCeEEEEEcC----CCce--E-----EEeeCCCCCceEEEEecCCCeEEEEecC
Q psy948 1482 KLTAIAVDWIAHNIYWTVSDRSGSKPKGKVMVAHND----GRYR--R-----SLVSENLESPSSIALDPTLGKMFWAETG 1550 (1576)
Q Consensus 1482 ~p~glAVDwv~~nLYWTD~~~~~~~~~~~I~v~~ld----G~~~--~-----~lv~~~l~~P~~IavDp~~G~LYWTD~g 1550 (1576)
.|.|||++...+.||+++.. ..+|.+...+ +... + .++ .....|.+||+|+. |.||.++++
T Consensus 196 ~~~gia~s~dg~~ly~~~~~------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-g~~g~pdgia~d~~-G~l~va~~~ 267 (343)
T 2qe8_A 196 GVNGIVLDAENEWLYLSPMH------STSMYRIKSADLSNLQLTDAELGSKIERY-SEKPICDGISIDKD-HNIYVGDLA 267 (343)
T ss_dssp CEEEEEECTTSCEEEEEESS------CSEEEEEEHHHHTCTTCCHHHHHTTCEEE-EECCSCSCEEECTT-CCEEEEEGG
T ss_pred ccceeEeccCCCEEEEEeCC------CCeEEEEEHHHhcCCCCChhhhhcceEec-ccCCCCceEEECCC-CCEEEEccC
Confidence 57899999988899999874 4578887642 2110 0 111 22347999999985 999999987
Q ss_pred CCCcEEEeec-CCCCcEEEEecCCCCC
Q psy948 1551 ASPRIESAWM-DGSHRSATQISNRQAP 1576 (1576)
Q Consensus 1551 ~~~~Iera~m-DGs~r~~i~~~~~~~P 1576 (1576)
.+ +|.+.+. +|.-++++....+.+|
T Consensus 268 ~~-~V~~~d~~~G~~~~~~~~~~~~~p 293 (343)
T 2qe8_A 268 HS-AIGVITSADRAYKLLVTDEKLSWT 293 (343)
T ss_dssp GT-EEEEEETTTTEEEEEEECGGGSCE
T ss_pred CC-eEEEEECCCCCEEEEEECCceecC
Confidence 55 8999999 8864443333335555
No 103
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.33 E-value=7.3e-05 Score=86.66 Aligned_cols=122 Identities=11% Similarity=0.079 Sum_probs=81.6
Q ss_pred ccceeeecc----cCCcEEEEeecccceeEEEeecccccceeeecccceeeeec-c-CCcceeeecCCCCeEEEeecCCC
Q psy948 1430 RRIEALDID----PVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKS-I-GKLTAIAVDWIAHNIYWTVSDRS 1503 (1576)
Q Consensus 1430 ~~i~ald~D----~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~-~-~~p~glAVDwv~~nLYWTD~~~~ 1503 (1576)
..+.+++++ +..+.||+++...+.|++..+... +.+... .....+.. . ..|.+|++|. .++||.++..
T Consensus 172 ~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~--g~~~~~-~~~~~~~~~~~~~p~~i~~d~-~G~l~v~~~~-- 245 (314)
T 1pjx_A 172 QFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGP--AKIENK-KVWGHIPGTHEGGADGMDFDE-DNNLLVANWG-- 245 (314)
T ss_dssp SSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEET--TEEEEE-EEEEECCCCSSCEEEEEEEBT-TCCEEEEEET--
T ss_pred CCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCC--Cccccc-eEEEECCCCCCCCCCceEECC-CCCEEEEEcC--
Confidence 345667777 777789999988889988776521 111000 00001111 1 5689999996 5689998754
Q ss_pred CCCCCCeEEEEEcC-CCceEEEeeCCCCCceEEEEecCCCeEEEEecCCCCcEEEeecCCC
Q psy948 1504 GSKPKGKVMVAHND-GRYRRSLVSENLESPSSIALDPTLGKMFWAETGASPRIESAWMDGS 1563 (1576)
Q Consensus 1504 ~~~~~~~I~v~~ld-G~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~mDGs 1563 (1576)
.+.|.+.+++ |+....+- .....|.+|+++|...+||.++.+. ..|.+..++..
T Consensus 246 ----~~~i~~~d~~~g~~~~~~~-~~~~~~~~i~~~~dg~~l~v~~~~~-~~l~~~~~~~~ 300 (314)
T 1pjx_A 246 ----SSHIEVFGPDGGQPKMRIR-CPFEKPSNLHFKPQTKTIFVTEHEN-NAVWKFEWQRN 300 (314)
T ss_dssp ----TTEEEEECTTCBSCSEEEE-CSSSCEEEEEECTTSSEEEEEETTT-TEEEEEECSSC
T ss_pred ----CCEEEEEcCCCCcEeEEEe-CCCCCceeEEECCCCCEEEEEeCCC-CeEEEEeCCCC
Confidence 4689999888 66555443 3447899999998766799888653 47888877643
No 104
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=98.31 E-value=0.00011 Score=86.92 Aligned_cols=257 Identities=13% Similarity=0.117 Sum_probs=145.2
Q ss_pred EecccccCCcceEEEeCCcceEEEecCCCcCeEEEEecCCCCcEEEEec----cCCCCCcceEEEec---cCCeEEEEcC
Q psy948 1188 KTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTH----EDDIAWPNALTLDY---FTERLYWADA 1260 (1576)
Q Consensus 1188 ~~l~~~l~~P~~iavdP~~g~lywtd~g~~~~I~ra~mdGs~~~~iv~~----~~~l~~P~gLaiD~---~~~rlYw~D~ 1260 (1576)
+++.++|..|++||+.|. |.||.++.. ..+|.+...++...+.+... .....-|.|||++. .+++||+..+
T Consensus 25 ~~va~gL~~P~~ia~~pd-G~llVter~-~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt 102 (347)
T 3das_A 25 RTVATGLNSPWGLAPLPG-GDLLVSSRD-EATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFT 102 (347)
T ss_dssp EEEECCCSSEEEEEECTT-SCEEEEETT-TCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEE
T ss_pred EEeecCCCCceEEEEcCC-CcEEEEEec-CCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEe
Confidence 456688999999999996 678888852 34788876654333333221 13456789999987 4789998643
Q ss_pred --CCCeEEEEeCCCC--------ceEEEEeC---CCccceeEEeee-CCeEEEeccCCCcceeeccccccccccceeccc
Q psy948 1261 --HLDYIASVDLDGK--------HKHIVISG---QKVPHVFALTLF-EDHIYWTDWNTKSINRADKFNAREIQAGILHHC 1326 (1576)
Q Consensus 1261 --~~~~I~s~~~dG~--------~r~~v~~~---~~~~~P~~lavf-ed~lYwtd~~~~~i~~~~k~~~~~~~~~~~~~c 1326 (1576)
..++|.+..+++. ..++|+.. ........|++- .++||++..........
T Consensus 103 ~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~---------------- 166 (347)
T 3das_A 103 SASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLS---------------- 166 (347)
T ss_dssp CSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGT----------------
T ss_pred cCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccc----------------
Confidence 5578888888772 23444421 111112234432 34566553221110000
Q ss_pred ccccCCCcceeeccCCceeccCCCccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceeccCCceEEEE
Q psy948 1327 MNITGGSGYLCTCYQGFIIDKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKANDNKLTIVY 1406 (1576)
Q Consensus 1327 ~n~~g~~~~~C~C~~G~~~~~~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~~~~~~ll~ 1406 (1576)
.+..
T Consensus 167 qd~~---------------------------------------------------------------------------- 170 (347)
T 3das_A 167 QDRK---------------------------------------------------------------------------- 170 (347)
T ss_dssp TCTT----------------------------------------------------------------------------
T ss_pred cCCC----------------------------------------------------------------------------
Confidence 0000
Q ss_pred ecCCceeeeccccc--------cccccccccccceeeecccCCcEEEEeecccc---eeEEEeecccccc-eeeec----
Q psy948 1407 SNGPEIRAYETHKR--------RFRDVISDERRIEALDIDPVDEIIYWVDSYDR---NIRRSFMLEAQKG-QVQAG---- 1470 (1576)
Q Consensus 1407 s~~~~Ir~i~~~~~--------~~~~~v~~~~~i~ald~D~~~~~vYWsD~~~~---~I~r~~l~~~~~~-~v~~~---- 1470 (1576)
.....|+++..++. .........+++.+|+||+ ++.||.++.+.. .|.++. .+.+.+ ....+
T Consensus 171 ~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp-~G~L~~~d~g~~~~deln~i~-~G~nyGwP~~~g~~~~ 248 (347)
T 3das_A 171 SLGGKILRMTPDGEPAPGNPFPGSPVYSYGHRNVQGLAWDD-KQRLFASEFGQDTWDELNAIK-PGDNYGWPEAEGKGGG 248 (347)
T ss_dssp CSTTCEEEECTTSSBCTTCSSTTCCEEEBCCSBCCEEEECT-TCCEEEEECCSSSCEEEEEEC-TTCBCCTTTCCSSCCC
T ss_pred CCCCEEEEEeCCCCccCCCCCCCCeEEeeCCCCcceEEECC-CCCEEEEecCCCCCceeeEEc-CCCEecCCcccCCCCC
Confidence 00011112211111 0011223568899999999 689999998763 455543 232210 00000
Q ss_pred --cccee-eee-ccCCcceeeecCCCCeEEEeecCCCCCCCCCeEEEEEcCCCc----eEEEeeCCCCCceEEEEecCCC
Q psy948 1471 --FGQDL-GIK-SIGKLTAIAVDWIAHNIYWTVSDRSGSKPKGKVMVAHNDGRY----RRSLVSENLESPSSIALDPTLG 1542 (1576)
Q Consensus 1471 --~~~~~-~~~-~~~~p~glAVDwv~~nLYWTD~~~~~~~~~~~I~v~~ldG~~----~~~lv~~~l~~P~~IavDp~~G 1542 (1576)
....+ .+. ....|.|||+- .+.||-+... ..+|.+..+++.. .+.++.....+|++|+++| .|
T Consensus 249 ~~~~~P~~~~~~~~~ap~G~~~~--~g~~~~~~l~------~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~p-DG 319 (347)
T 3das_A 249 SGFHDPVAQWSTDEASPSGIAYA--EGSVWMAGLR------GERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAG-GD 319 (347)
T ss_dssp TTCCCCSEEECTTTCCEEEEEEE--TTEEEEEEST------TCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEE-TT
T ss_pred ccccCCcEecCCCCCCCcceEEE--cCceeecccc------CCEEEEEEecCCceecceEEeecCCCCCccEEEECC-CC
Confidence 00001 111 12478899996 6899988753 4678888887652 2456655568999999998 68
Q ss_pred eEEEEec
Q psy948 1543 KMFWAET 1549 (1576)
Q Consensus 1543 ~LYWTD~ 1549 (1576)
.||.++.
T Consensus 320 ~lyv~td 326 (347)
T 3das_A 320 KLWLVTS 326 (347)
T ss_dssp EEEEEEC
T ss_pred cEEEEEc
Confidence 9999864
No 105
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=98.29 E-value=9.4e-07 Score=111.23 Aligned_cols=61 Identities=25% Similarity=0.704 Sum_probs=51.4
Q ss_pred ccccccCCCcceee-ccCCceeccC----------CCccccCCCCccCCCCccc--cccccCC----CceEEEcCCCcEe
Q psy948 1325 HCMNITGGSGYLCT-CYQGFIIDKN----------NAKKCLDVDECATGIHHCS--QVCTNLN----GTYACSCNAGFTL 1387 (1576)
Q Consensus 1325 ~c~n~~g~~~~~C~-C~~G~~~~~~----------~~~~c~d~neC~~~~~~Cs--~lC~n~~----gsy~C~Cp~G~~l 1387 (1576)
.|.++.++ |+|. |++||..... .++.|++++||...+++|. +.|++++ ++|+|.|+.||++
T Consensus 62 ~CvNt~gs--Y~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~G 139 (634)
T 1yo8_A 62 RCVNTQPG--FHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAG 139 (634)
T ss_dssp CEEECSSS--EEECCCCTTEEECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEE
T ss_pred ceeeccCc--eecccCCCCcccCccccccccccccCCCcccccccccCCCcccccCccccccccccccceeeeccCCccc
Confidence 57777775 9999 9999987531 3456999999998778996 6899998 9999999999997
No 106
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.27 E-value=0.00013 Score=82.67 Aligned_cols=121 Identities=8% Similarity=0.121 Sum_probs=78.5
Q ss_pred cceeeecccCCcEEEEeecccc-eeEEEeecccccc---eeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCC
Q psy948 1431 RIEALDIDPVDEIIYWVDSYDR-NIRRSFMLEAQKG---QVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSK 1506 (1576)
Q Consensus 1431 ~i~ald~D~~~~~vYWsD~~~~-~I~r~~l~~~~~~---~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~ 1506 (1576)
...+|+||+..++||.+..... .|++.. +.... ++...... .....+..+.+||+|+.+++||.....
T Consensus 122 g~EGLA~d~~~~~L~va~E~~p~~i~~~~--g~~~~~~l~i~~~~~~-~~~~~~~d~S~l~~dp~tg~lliLS~~----- 193 (255)
T 3qqz_A 122 GFEGLAYSRQDHTFWFFKEKNPIEVYKVN--GLLSSNELHISKDKAL-QRQFTLDDVSGAEFNQQKNTLLVLSHE----- 193 (255)
T ss_dssp CCEEEEEETTTTEEEEEEESSSEEEEEEE--STTCSSCCEEEECHHH-HHTCCSSCCCEEEEETTTTEEEEEETT-----
T ss_pred CcceEEEeCCCCEEEEEECcCCceEEEEc--ccccCCceeeecchhh-ccccccCCceeEEEcCCCCeEEEEECC-----
Confidence 3567888888888887765544 677665 21111 11110000 000124578999999999999999764
Q ss_pred CCCeEEEEEcCCCceEEEe-eC-------CCCCceEEEEecCCCeEEEEecCCCCcEEEeecCCC
Q psy948 1507 PKGKVMVAHNDGRYRRSLV-SE-------NLESPSSIALDPTLGKMFWAETGASPRIESAWMDGS 1563 (1576)
Q Consensus 1507 ~~~~I~v~~ldG~~~~~lv-~~-------~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~mDGs 1563 (1576)
.+.|.+.+++|+....+- .. .+.||-|||+|| .|.||.+--. ..++|..-+++
T Consensus 194 -s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~-~G~lyIvsE~--n~~y~f~~~~~ 254 (255)
T 3qqz_A 194 -SRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDA-SGNIYIVSEP--NRFYRFTPQSS 254 (255)
T ss_dssp -TTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECT-TCCEEEEETT--TEEEEEEC---
T ss_pred -CCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECC-CCCEEEEcCC--ceEEEEEecCC
Confidence 578999999998554443 22 247999999998 5899999543 37777765543
No 107
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=98.24 E-value=4.5e-07 Score=80.62 Aligned_cols=46 Identities=24% Similarity=0.538 Sum_probs=40.1
Q ss_pred cCCCCccCCCCccccccccCCC-ceEEEcCCCcEecCCCCCceeccCC
Q psy948 1354 LDVDECATGIHHCSQVCTNLNG-TYACSCNAGFTLSDGLSGVCKANDN 1400 (1576)
Q Consensus 1354 ~d~neC~~~~~~Cs~lC~n~~g-sy~C~Cp~G~~l~d~~~~~C~~~~~ 1400 (1576)
.|+|||..+|++|+|+|+|++| +|+|+|+.||.|..+.+ +|.++.+
T Consensus 3 ~d~~eC~~~nggC~h~C~n~~g~s~~C~C~~Gy~L~~D~~-tC~d~de 49 (69)
T 1kli_L 3 DDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGV-SCTPTVE 49 (69)
T ss_dssp SCCCCTTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSS-CEEECSS
T ss_pred cccccccCCCCCcCCEeEcCCCCCEEEeCCCCCeECCCCC-cccCccc
Confidence 4789999999999999999999 89999999999985544 7987655
No 108
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.24 E-value=0.0005 Score=80.22 Aligned_cols=282 Identities=9% Similarity=0.001 Sum_probs=155.6
Q ss_pred eeEEecCCCeEEEEeccC-CceEecccccCCcceEEEeCCcceEEEecCCCcCeEEEEecCCCCc-EEEEeccCCCCCcc
Q psy948 1167 LCALDVRSIKLDVAELDG-TNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNF-TRILTHEDDIAWPN 1244 (1576)
Q Consensus 1167 ~~avD~~~~~I~v~~ldG-~~r~~l~~~l~~P~~iavdP~~g~lywtd~g~~~~I~ra~mdGs~~-~~iv~~~~~l~~P~ 1244 (1576)
+|+++...++|.+.++.. .....+......| +++++|...+||.+..+.. +|...++..... ...+. ....|.
T Consensus 12 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~-~i~~~d~~~~~~~~~~~~---~~~~~~ 86 (331)
T 3u4y_A 12 GIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQ-TLVQIETQLEPPKVVAIQ---EGQSSM 86 (331)
T ss_dssp EEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTC-EEEEEECSSSSCEEEEEE---ECSSCC
T ss_pred EEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCC-eEEEEECCCCceeEEecc---cCCCCc
Confidence 466667777888888764 3333444445667 9999999999999887543 777777765543 33333 245677
Q ss_pred e-EEEeccCCeEEEEcCCCC--eEEEEeCCCCceEEEEeCCCccceeEEeeeC--CeEEEeccCCCc-ceeecccccccc
Q psy948 1245 A-LTLDYFTERLYWADAHLD--YIASVDLDGKHKHIVISGQKVPHVFALTLFE--DHIYWTDWNTKS-INRADKFNAREI 1318 (1576)
Q Consensus 1245 g-LaiD~~~~rlYw~D~~~~--~I~s~~~dG~~r~~v~~~~~~~~P~~lavfe--d~lYwtd~~~~~-i~~~~k~~~~~~ 1318 (1576)
. ++++...++||....... .|...++........+.. ...|.++++.. .+||.++..... |...+......+
T Consensus 87 ~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~--~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~ 164 (331)
T 3u4y_A 87 ADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI--PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVL 164 (331)
T ss_dssp CCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC--CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCE
T ss_pred cceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC--CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcE
Confidence 8 999999999994443334 899999876654443332 34567777754 479999877655 443222111100
Q ss_pred ccceecccccccCCCcceeeccCCceeccCCCccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceecc
Q psy948 1319 QAGILHHCMNITGGSGYLCTCYQGFIIDKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKAN 1398 (1576)
Q Consensus 1319 ~~~~~~~c~n~~g~~~~~C~C~~G~~~~~~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~ 1398 (1576)
.... . ..+.. . .. |.+....++.
T Consensus 165 ~~~~-~------------------~~~~~--~-------------~~----------------~~~~~~spdg------- 187 (331)
T 3u4y_A 165 FDTG-Q------------------EFISG--G-------------TR----------------PFNITFTPDG------- 187 (331)
T ss_dssp EEEE-E------------------EEECS--S-------------SS----------------EEEEEECTTS-------
T ss_pred eecC-C------------------ccccC--C-------------CC----------------ccceEECCCC-------
Confidence 0000 0 00000 0 00 0011111110
Q ss_pred CCceEEEEecCCceeeeccccccc---cccccccccceeeecccCCcEEEEeecccceeEEEeecccccceeeeccccee
Q psy948 1399 DNKLTIVYSNGPEIRAYETHKRRF---RDVISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDL 1475 (1576)
Q Consensus 1399 ~~~~~ll~s~~~~Ir~i~~~~~~~---~~~v~~~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~ 1475 (1576)
..+++.......|+.+.+..... ...+.....+.+++|.+..+.||.+....+.|...++.......+ ......+
T Consensus 188 -~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~-~~~~~~~ 265 (331)
T 3u4y_A 188 -NFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFV-KSFGHGL 265 (331)
T ss_dssp -SEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEE-EEEECCC
T ss_pred -CEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeee-ccccccc
Confidence 00111111222333333332222 112223345778899999999999988788887766543221111 1100000
Q ss_pred e--eeccCCcceeeecCCCCeEEEeecCCCCCCCCCeEEEEEcCCCc
Q psy948 1476 G--IKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPKGKVMVAHNDGRY 1520 (1576)
Q Consensus 1476 ~--~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~~~I~v~~ldG~~ 1520 (1576)
. ......+.+|++.+.++.||.+... .++|.|.++.++.
T Consensus 266 ~~~~~~~~~~~~~~~spdg~~l~v~~~~------~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 266 LIDPRPLFGANQMALNKTETKLFISANI------SRELKVFTISGKV 306 (331)
T ss_dssp CCCCGGGTTCCCEEECTTSSEEEEEETT------TTEEEEEETTSCE
T ss_pred ccCCCCcccccceEECCCCCEEEEecCC------CCcEEEEEecCCc
Confidence 0 0111223568999999999999764 5789999998754
No 109
>2gtl_M Hemoglobin linker chain L1; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=98.21 E-value=4.7e-07 Score=97.55 Aligned_cols=64 Identities=30% Similarity=0.593 Sum_probs=48.9
Q ss_pred CCCCCCCceecCC--CeEEeCcccCCCCCCCCCCCCCC--Ccccc-cccCCceecCCCceecceeccCCCCCCCCCCCCC
Q psy948 546 YRQCSESEFQCKN--GKCIPAQWRCDHDEDCTDGSDEM--ECGGF-QCKNGTFQCSSGHCIAAYFRCDGDRDCRDLSDEM 620 (1576)
Q Consensus 546 ~~~C~~~~f~C~~--g~Ci~~~~~CDg~~DC~dgsDE~--~C~~~-~C~~~~f~C~~g~Ci~~~~~Cdg~~dC~d~sDE~ 620 (1576)
...|++.+|+|.+ |+|||.+|+|||..||.|||||. +|... .+...+|.+. .....|.++++|.
T Consensus 51 ~~~C~~~~F~C~~~~g~CI~~~~~CDG~~DC~DgSDE~~~~C~~~~~~~~~~~~g~-----------~~~~~C~~~~pe~ 119 (217)
T 2gtl_M 51 EHHCDEHESECRGDVPECIHDLLFCDGEKDCRDGSDEDPETCSLNITHVGSSYTGL-----------ATWTSCEDLNPDH 119 (217)
T ss_dssp CCCCCTTEEECSSSSCCEEEGGGTTSSSCCSSSSTTTSHHHHCCGGGCTTCEEEEE-----------EEESSSCSCCSEE
T ss_pred CCCCCCCceecCCCCCcEechhhccCCCCCCCCCCccccCcCCCCcccCCcccccc-----------cCcccCCCCCCCe
Confidence 3579999999965 99999999999999999999998 78755 4444445431 2334777777774
No 110
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.19 E-value=0.0017 Score=77.66 Aligned_cols=270 Identities=14% Similarity=0.130 Sum_probs=154.8
Q ss_pred eeEEecCCCeEEEEeccCCceEecccccCCcceEEEeCCcceEEEecCCCcCeEEEEecCCCCcEEEEeccCCCCCcceE
Q psy948 1167 LCALDVRSIKLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNAL 1246 (1576)
Q Consensus 1167 ~~avD~~~~~I~v~~ldG~~r~~l~~~l~~P~~iavdP~~g~lywtd~g~~~~I~ra~mdGs~~~~iv~~~~~l~~P~gL 1246 (1576)
++++....+.|.+.++........+..-..|.++++.|...+||.+... ...|...++........+.. -..|.++
T Consensus 4 l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-d~~i~v~d~~~~~~~~~~~~---~~~v~~~ 79 (391)
T 1l0q_A 4 AYIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAH-SNDVSIIDTATNNVIATVPA---GSSPQGV 79 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGG-GTEEEEEETTTTEEEEEEEC---SSSEEEE
T ss_pred EEEEcCCCCEEEEEECCCCeEEEEeecCCCcceEEECCCCCEEEEECCC-CCeEEEEECCCCeEEEEEEC---CCCccce
Confidence 3455556677777777643333233334568999999999999988632 34566666543332233322 2378899
Q ss_pred EEeccCCeEEEEcCCCCeEEEEeCCCCceEEEEeCCCccceeEEeee--CCeEEEeccCCCcceeeccccccccccceec
Q psy948 1247 TLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLF--EDHIYWTDWNTKSINRADKFNAREIQAGILH 1324 (1576)
Q Consensus 1247 aiD~~~~rlYw~D~~~~~I~s~~~dG~~r~~v~~~~~~~~P~~lavf--ed~lYwtd~~~~~i~~~~k~~~~~~~~~~~~ 1324 (1576)
++....++||.+......|...++........+.. ...+.++++. +.+||.+....+.
T Consensus 80 ~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~~------------------ 139 (391)
T 1l0q_A 80 AVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT--GKSPLGLALSPDGKKLYVTNNGDKT------------------ 139 (391)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSSEEEEEETTTTE------------------
T ss_pred EECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeC--CCCcceEEECCCCCEEEEEeCCCCE------------------
Confidence 99988888998887777777777765433322221 1122333322 1122222211111
Q ss_pred ccccccCCCcceeeccCCceeccCCCccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceeccCCceEE
Q psy948 1325 HCMNITGGSGYLCTCYQGFIIDKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKANDNKLTI 1404 (1576)
Q Consensus 1325 ~c~n~~g~~~~~C~C~~G~~~~~~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~~~~~~l 1404 (1576)
T Consensus 140 -------------------------------------------------------------------------------- 139 (391)
T 1l0q_A 140 -------------------------------------------------------------------------------- 139 (391)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEecCCceeeeccccccccccccccccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcc
Q psy948 1405 VYSNGPEIRAYETHKRRFRDVISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLT 1484 (1576)
Q Consensus 1405 l~s~~~~Ir~i~~~~~~~~~~v~~~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~ 1484 (1576)
|+.+.+........+.....+..+.|.+..+.||.+....+.|+..++.... ... .+.....+.
T Consensus 140 -------v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~---~~~------~~~~~~~~~ 203 (391)
T 1l0q_A 140 -------VSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNS---VID------TVKVEAAPS 203 (391)
T ss_dssp -------EEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE---EEE------EEECSSEEE
T ss_pred -------EEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCe---EEE------EEecCCCcc
Confidence 1111111111111111112345677777777888777777777766554321 111 112234678
Q ss_pred eeeecCCCCeEEEeecCCCCCCCCCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEecCCCCcEEEeecCC
Q psy948 1485 AIAVDWIAHNIYWTVSDRSGSKPKGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAETGASPRIESAWMDG 1562 (1576)
Q Consensus 1485 glAVDwv~~nLYWTD~~~~~~~~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~mDG 1562 (1576)
++++...++.||.+.... ..+.|.+.++........+.. -..|.+|++.|...+||.+.... .+|...++..
T Consensus 204 ~~~~~~~g~~l~~~~~~~----~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~s~~~d-~~v~v~d~~~ 275 (391)
T 1l0q_A 204 GIAVNPEGTKAYVTNVDK----YFNTVSMIDTGTNKITARIPV-GPDPAGIAVTPDGKKVYVALSFX-NTVSVIDTAT 275 (391)
T ss_dssp EEEECTTSSEEEEEEECS----SCCEEEEEETTTTEEEEEEEC-CSSEEEEEECTTSSEEEEEETTT-TEEEEEETTT
T ss_pred ceEECCCCCEEEEEecCc----CCCcEEEEECCCCeEEEEEec-CCCccEEEEccCCCEEEEEcCCC-CEEEEEECCC
Confidence 899998888899887411 147899999876544444433 34689999999988898886433 3677777663
No 111
>2gtl_N Extracellular hemoglobin linker L2 subunit; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=98.15 E-value=5.6e-07 Score=95.81 Aligned_cols=60 Identities=27% Similarity=0.652 Sum_probs=47.5
Q ss_pred CCCCCceecC-CCCeeecCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCC-CccccCCCcccCC
Q psy948 378 PCPDLEFKCA-SNGRCILNSWKCDGEPDCKDGSDEDPAMCHNR-PCDKD-TEFACRNGHCIPK 437 (1576)
Q Consensus 378 ~C~~~~f~C~-~~~~Ci~~~~~Cdg~~dC~dgsDE~~~~C~~~-~C~~~-~~f~C~~~~Ci~~ 437 (1576)
.|.+.+|+|. +++.||+..|+|||..||+|||||.+..|... +|.++ ..++|.++.|+.+
T Consensus 52 ~C~~~eFqC~~~~g~CIp~~wvCDG~~DC~DGSDE~~~~C~~~~tc~~~qF~g~~~~d~C~kr 114 (220)
T 2gtl_N 52 HCEKRTFQCGGNEQECISDLLVCDGHKDCHNAHDEDPDVCDTSVVKAGNVFSGTSTWHGCLAR 114 (220)
T ss_dssp SSCTTEEECCSSSCCEEETTTTTSSSCCSTTCTTSCGGGGCGGGGCTTCEEEEEEEECSSCCC
T ss_pred CCCCCccCcCCCCCcEeCcceecCCCCCCCCCCccCcccCCCCCccCCcceeeEecCChhhcC
Confidence 4778899995 36899999999999999999999976678877 77652 1346888888755
No 112
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=98.15 E-value=5.7e-07 Score=79.96 Aligned_cols=42 Identities=24% Similarity=0.487 Sum_probs=36.5
Q ss_pred cCccccccCCCcccccceeCCC-eeeeecCCCcccCCCCcccCC
Q psy948 1076 NVDECAKVETNQCGHKCVDTLT-GYYCECNTGYNDDDIGTVSPS 1118 (1576)
Q Consensus 1076 didEC~~~~~~~Csq~C~Nt~G-sy~C~C~~Gy~l~~~~~~~~~ 1118 (1576)
|||||+. ++++|+|+|+|++| ||+|+|++||.|..+++.+..
T Consensus 4 d~~eC~~-~nggC~h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d 46 (69)
T 1kli_L 4 DQLICVN-ENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTP 46 (69)
T ss_dssp CCCCTTS-GGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEE
T ss_pred ccccccC-CCCCcCCEeEcCCCCCEEEeCCCCCeECCCCCcccC
Confidence 6999986 67999999999999 999999999999877765543
No 113
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=98.14 E-value=1e-06 Score=81.77 Aligned_cols=61 Identities=34% Similarity=0.932 Sum_probs=51.8
Q ss_pred cccccccCCCcceeeccCCceeccCCCccccCCCCccCCCCccc-cccccCCCceEEEcCCCcEecCC
Q psy948 1324 HHCMNITGGSGYLCTCYQGFIIDKNNAKKCLDVDECATGIHHCS-QVCTNLNGTYACSCNAGFTLSDG 1390 (1576)
Q Consensus 1324 ~~c~n~~g~~~~~C~C~~G~~~~~~~~~~c~d~neC~~~~~~Cs-~lC~n~~gsy~C~Cp~G~~l~d~ 1390 (1576)
..|.++.++ |+|.|++||.+. +..|++++||.. ..+|. +.|+|++|+|+|.|++||+|...
T Consensus 17 g~C~n~~g~--y~C~C~~Gy~~~---g~~C~dideC~~-~~~C~~~~C~n~~g~y~C~C~~G~~g~~~ 78 (82)
T 1emn_A 17 GQCINTDGS--YRCECPFGYILA---GNECVDTDECSV-GNPCGNGTCKNVIGGFECTCEEGFEPGPM 78 (82)
T ss_dssp SEECCCSSC--CCEECCTTEEEE---TTEEEECCGGGT-CCTTSSSCEEECSSSEEECCSSSSCCCSS
T ss_pred CEEEecCCC--EEEECCCCeECC---CCccCCcccccC-CCCCCCCEeECCCCCEEeECCCCeEeCCC
Confidence 368888876 999999999873 578999999985 35675 79999999999999999998654
No 114
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.13 E-value=0.0009 Score=77.96 Aligned_cols=104 Identities=10% Similarity=0.046 Sum_probs=67.8
Q ss_pred eeEEecCCCeEEEEecc--CCceEec--ccccCCcceEEEeCCcceEEEecCCCcCeEEEEec-CCCCcEEEEeccCCCC
Q psy948 1167 LCALDVRSIKLDVAELD--GTNRKTL--KTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGM-DGSNFTRILTHEDDIA 1241 (1576)
Q Consensus 1167 ~~avD~~~~~I~v~~ld--G~~r~~l--~~~l~~P~~iavdP~~g~lywtd~g~~~~I~ra~m-dGs~~~~iv~~~~~l~ 1241 (1576)
++++....+.|.+.+++ +...+.+ ......|.+|+++|...+||.+.... ..|....+ +|...+.+.. .....
T Consensus 52 l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-~~i~~~d~~~~~~~~~~~~-~~~~~ 129 (343)
T 1ri6_A 52 LYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNA-GNVSVTRLEDGLPVGVVDV-VEGLD 129 (343)
T ss_dssp EEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTT-TEEEEEEEETTEEEEEEEE-ECCCT
T ss_pred EEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCC-CeEEEEECCCCcccccccc-ccCCC
Confidence 45555555778887776 3232222 12223899999999999999988643 23444444 4543333222 23456
Q ss_pred CcceEEEeccCCeEEEEcCCCCeEEEEeCCC
Q psy948 1242 WPNALTLDYFTERLYWADAHLDYIASVDLDG 1272 (1576)
Q Consensus 1242 ~P~gLaiD~~~~rlYw~D~~~~~I~s~~~dG 1272 (1576)
.|.+++++...+.||.++.....|...++..
T Consensus 130 ~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 160 (343)
T 1ri6_A 130 GCHSANISPDNRTLWVPALKQDRICLFTVSD 160 (343)
T ss_dssp TBCCCEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred CceEEEECCCCCEEEEecCCCCEEEEEEecC
Confidence 7999999999999999987777787777764
No 115
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=98.13 E-value=8.5e-07 Score=83.32 Aligned_cols=68 Identities=37% Similarity=0.956 Sum_probs=55.2
Q ss_pred cccccccCCCcceeeccCCceeccCCCccccCCCCccCCCCccccccccCCCceEEEcC--CCcEecCCCCCceec
Q psy948 1324 HHCMNITGGSGYLCTCYQGFIIDKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCN--AGFTLSDGLSGVCKA 1397 (1576)
Q Consensus 1324 ~~c~n~~g~~~~~C~C~~G~~~~~~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp--~G~~l~d~~~~~C~~ 1397 (1576)
+.|.++.++ |+|+|++||.+.. .++.|++++||.. ++|.+.|+|++|+|+|.|| .||.+..+.. +|.+
T Consensus 16 ~~C~n~~g~--y~C~C~~G~~~~~-~g~~C~dideC~~--~~C~~~C~n~~g~y~C~C~g~~G~~~~~~~~-~C~d 85 (87)
T 1z6c_A 16 AVCKNIPGD--FECECPEGYRYNL-KSKSCEDIDECSE--NMCAQLCVNYPGGYTCYCDGKKGFKLAQDQK-SCEV 85 (87)
T ss_dssp SSCCCBTTB--CCCSSSTTCEEET-TTTEEECCCHHHH--SCCSSEECCCSSSCCEECCSSSCCBCCTTSS-SCBC
T ss_pred CEeECCCCC--EEEECCCCceECC-CCCcCCCcCeeCC--CCCCCEEEccCCCEEEECCCCcCCcccCCCC-cceE
Confidence 468888875 9999999999865 3678999999974 6799999999999999995 7888764432 5754
No 116
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.11 E-value=0.00059 Score=80.10 Aligned_cols=252 Identities=10% Similarity=0.082 Sum_probs=142.8
Q ss_pred CCcceEEEeccCCeEEEEcCC------CCeEEEEeCCCCceEEEEeCCCccceeEEeee--CCeEEEeccCCCcceeecc
Q psy948 1241 AWPNALTLDYFTERLYWADAH------LDYIASVDLDGKHKHIVISGQKVPHVFALTLF--EDHIYWTDWNTKSINRADK 1312 (1576)
Q Consensus 1241 ~~P~gLaiD~~~~rlYw~D~~------~~~I~s~~~dG~~r~~v~~~~~~~~P~~lavf--ed~lYwtd~~~~~i~~~~k 1312 (1576)
..|.+++++...++||++... ...|...++........+.. ...|.++++. ++++|+++.....|...+.
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 118 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN--DLKPFGATINNTTQTLWFGNTVNSAVTAIDA 118 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE--SSCCCSEEEETTTTEEEEEETTTTEEEEEET
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec--CCCcceEEECCCCCEEEEEecCCCEEEEEeC
Confidence 468899999999999999976 56888888875544333322 2236666664 4679999988888877776
Q ss_pred ccccccccceecccccccCCCcceeeccCCceeccCCCccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCC
Q psy948 1313 FNAREIQAGILHHCMNITGGSGYLCTCYQGFIIDKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLS 1392 (1576)
Q Consensus 1313 ~~~~~~~~~~~~~c~n~~g~~~~~C~C~~G~~~~~~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~ 1392 (1576)
.+++...... ... +.... .. .+.. |.+....++.
T Consensus 119 ~~~~~~~~~~------~~~----------~~~~~--~~----------------------~~~~-----~~~~~~s~dg- 152 (353)
T 3vgz_A 119 KTGEVKGRLV------LDD----------RKRTE--EV----------------------RPLQ-----PRELVADDAT- 152 (353)
T ss_dssp TTCCEEEEEE------SCC----------CCCCS--SC----------------------CCCE-----EEEEEEETTT-
T ss_pred CCCeeEEEEe------cCC----------Ccccc--cc----------------------CCCC-----CceEEECCCC-
Confidence 5544322100 000 00000 00 0000 0011111111
Q ss_pred CceeccCCceEEEE-ecCCceeeecccccccccccc-ccccceeeecccCCcEEEEeecccceeEEEeecccccceeeec
Q psy948 1393 GVCKANDNKLTIVY-SNGPEIRAYETHKRRFRDVIS-DERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAG 1470 (1576)
Q Consensus 1393 ~~C~~~~~~~~ll~-s~~~~Ir~i~~~~~~~~~~v~-~~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~ 1470 (1576)
..+++.. .....|+.+.+........+. ....+.++.+++..++||.++. .+.|+..++... ++...
T Consensus 153 -------~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-~~~i~~~d~~~~---~~~~~ 221 (353)
T 3vgz_A 153 -------NTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNA-DGELITIDTADN---KILSR 221 (353)
T ss_dssp -------TEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECT-TSEEEEEETTTT---EEEEE
T ss_pred -------CEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcC-CCeEEEEECCCC---eEEEE
Confidence 1111111 112334444443332222222 2334778889999999998876 567776554322 21110
Q ss_pred ccceeeee-ccCCcceeeecCCCCeEEEeecCCCCCCCCCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEec
Q psy948 1471 FGQDLGIK-SIGKLTAIAVDWIAHNIYWTVSDRSGSKPKGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAET 1549 (1576)
Q Consensus 1471 ~~~~~~~~-~~~~p~glAVDwv~~nLYWTD~~~~~~~~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~ 1549 (1576)
. .+... ....+.+|+++..++.||.++.. .+.|.+.++........+. +..|.+|+++|..++||.+..
T Consensus 222 ~--~~~~~~~~~~~~~~~~s~dg~~l~~~~~~------~~~v~~~d~~~~~~~~~~~--~~~~~~~~~s~dg~~l~v~~~ 291 (353)
T 3vgz_A 222 K--KLLDDGKEHFFINISLDTARQRAFITDSK------AAEVLVVDTRNGNILAKVA--APESLAVLFNPARNEAYVTHR 291 (353)
T ss_dssp E--ECCCSSSCCCEEEEEEETTTTEEEEEESS------SSEEEEEETTTCCEEEEEE--CSSCCCEEEETTTTEEEEEET
T ss_pred E--EcCCCCCCcccceEEECCCCCEEEEEeCC------CCEEEEEECCCCcEEEEEE--cCCCceEEECCCCCEEEEEEC
Confidence 0 00000 12356789999989999999864 4789999985543333332 456889999999989999986
Q ss_pred CCCCcEEEeecCC
Q psy948 1550 GASPRIESAWMDG 1562 (1576)
Q Consensus 1550 g~~~~Iera~mDG 1562 (1576)
+.. .|...++..
T Consensus 292 ~~~-~v~~~d~~~ 303 (353)
T 3vgz_A 292 QAG-KVSVIDAKS 303 (353)
T ss_dssp TTT-EEEEEETTT
T ss_pred CCC-eEEEEECCC
Confidence 543 677777653
No 117
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=98.09 E-value=1.4e-06 Score=74.13 Aligned_cols=44 Identities=27% Similarity=0.628 Sum_probs=37.1
Q ss_pred CCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceeccCC
Q psy948 1356 VDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKANDN 1400 (1576)
Q Consensus 1356 ~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~~~ 1400 (1576)
.|||..++++|+|+|+|++|+|+|.|++||.|..+.+ +|.++++
T Consensus 1 ~dEC~~~~~~C~~~C~nt~Gsy~C~C~~Gy~L~~d~~-~C~dide 44 (55)
T 2jkh_L 1 RKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGK-ACIPTGP 44 (55)
T ss_dssp -CCTTTGGGGCSSEEEEETTEEEEECCTTEEECTTSS-CEEESSS
T ss_pred CccccCCCCCcCcEeEcCCCCeEEeCCCCCEECCCCC-eeccCcc
Confidence 3789888899999999999999999999999975543 6987654
No 118
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.05 E-value=3.2e-06 Score=83.79 Aligned_cols=67 Identities=27% Similarity=0.658 Sum_probs=54.0
Q ss_pred cccccccCCCcceeeccCCceeccCCCccccCC---CCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceecc
Q psy948 1324 HHCMNITGGSGYLCTCYQGFIIDKNNAKKCLDV---DECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKAN 1398 (1576)
Q Consensus 1324 ~~c~n~~g~~~~~C~C~~G~~~~~~~~~~c~d~---neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~ 1398 (1576)
..|.++.++ |+|.|+.||.. ..|+++ +||..++++|++.|+|+.|+|+|.|++||+|..+.+ +|.+.
T Consensus 26 g~C~~~~~~--y~C~C~~G~~G-----~~C~~~~~~~~C~~~~~~C~~~C~n~~g~y~C~C~~G~~~~~~g~-~C~~~ 95 (114)
T 1aut_L 26 GTCIDGIGS--FSCDCRSGWEG-----RFCQREVSFLNCSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLL-QCHPA 95 (114)
T ss_dssp EEECCCSSC--CCEEECTTEES-----TTSCEECCSSSSSSGGGGCSSEEEECSSSEEEECCTTEEECTTSS-CEEEC
T ss_pred CCCCCCCCC--cEeeCCCCCcC-----CCcCcCCcCCcCcCCCCCCCCEeECCCCCEEeECCCCeeECCCCC-ccCcC
Confidence 357777765 99999999974 347653 579888899999999999999999999999974443 68754
No 119
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=98.05 E-value=2e-06 Score=89.09 Aligned_cols=68 Identities=29% Similarity=0.633 Sum_probs=57.1
Q ss_pred cccccccCCCcceeeccCCceeccCCCccccCCCCccCCCCcccccc-ccCCCceEEEcCCCcEecCCCCCceeccC
Q psy948 1324 HHCMNITGGSGYLCTCYQGFIIDKNNAKKCLDVDECATGIHHCSQVC-TNLNGTYACSCNAGFTLSDGLSGVCKAND 1399 (1576)
Q Consensus 1324 ~~c~n~~g~~~~~C~C~~G~~~~~~~~~~c~d~neC~~~~~~Cs~lC-~n~~gsy~C~Cp~G~~l~d~~~~~C~~~~ 1399 (1576)
..|.++.++ |+|.|+.||. +..|.++++|...+++|.+.| +|+.|+|+|.|++||+|..+.. +|....
T Consensus 60 g~C~~~~~~--y~C~C~~G~~-----G~~C~~~deC~~~~~~C~~~C~~n~~g~y~C~C~~Gy~l~~dG~-~C~~~~ 128 (146)
T 1x7a_L 60 GLCKDDINS--YECWCQVGFE-----GKNCELDATCNIKNGRCKQFCKTGADSKVLCSCTTGYRLAPDQK-SCKPAV 128 (146)
T ss_dssp CEEEECSSC--EEEECCSSEE-----STTTCEECCTTSGGGSCSSBCCCCSSSCCCCBCCTTEEECTTSS-SEEECS
T ss_pred CEeECCCCC--EEEecCCCCc-----CCcCCCCccccCCCCCCcCCCCCCCCCCEEeEcCCCcEeCCCCC-cCCCCC
Confidence 367777775 9999999996 467999999998788999999 9999999999999999874433 687543
No 120
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.03 E-value=0.00035 Score=81.24 Aligned_cols=85 Identities=12% Similarity=0.075 Sum_probs=58.6
Q ss_pred cCCcceeeecCCCCeEEEeecCCCCCCCCCeEEEEEcCCC---ceEEEeeCCCCCceEEEEecCCCeEEEEecCCCCcEE
Q psy948 1480 IGKLTAIAVDWIAHNIYWTVSDRSGSKPKGKVMVAHNDGR---YRRSLVSENLESPSSIALDPTLGKMFWAETGASPRIE 1556 (1576)
Q Consensus 1480 ~~~p~glAVDwv~~nLYWTD~~~~~~~~~~~I~v~~ldG~---~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~~~~Ie 1556 (1576)
+..|.|||++...+.|||++.... ....++|.+.++++. ..++++......|.+|++|+. |.||.+..+ .|.
T Consensus 187 ~~~p~gl~~spdg~~lyv~~~~~~-~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~-G~lwv~~~~---gv~ 261 (305)
T 3dr2_A 187 LDHPNGLAFSPDEQTLYVSQTPEQ-GHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRG-GWLWSSSGT---GVC 261 (305)
T ss_dssp ESSEEEEEECTTSSEEEEEECCC----CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTT-SCEEECCSS---EEE
T ss_pred CCCCcceEEcCCCCEEEEEecCCc-CCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCC-CCEEEecCC---cEE
Confidence 457899999998889999987410 000267999887753 234444444567999999975 677666633 588
Q ss_pred EeecCCCCcEEEE
Q psy948 1557 SAWMDGSHRSATQ 1569 (1576)
Q Consensus 1557 ra~mDGs~r~~i~ 1569 (1576)
+.+.+|.....|.
T Consensus 262 ~~~~~g~~~~~~~ 274 (305)
T 3dr2_A 262 VFDSDGQLLGHIP 274 (305)
T ss_dssp EECTTSCEEEEEE
T ss_pred EECCCCCEEEEEE
Confidence 8888887655554
No 121
>2gtl_M Hemoglobin linker chain L1; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=98.02 E-value=2e-06 Score=92.79 Aligned_cols=41 Identities=39% Similarity=0.793 Sum_probs=36.7
Q ss_pred cCCCCCCcccccC--CceecccccCCCCCCCCCCCCCc--ccCcc
Q psy948 748 YRQCSESEFQCKN--GKCIPAQWRCDHDEDCTDGSDEM--ECGGF 788 (1576)
Q Consensus 748 ~~~C~~~~f~C~~--g~CI~~~~~CDg~~DC~dgsDE~--~C~~~ 788 (1576)
...|++.+|+|.+ |+|||..|+|||+.||.|||||. .|...
T Consensus 51 ~~~C~~~~F~C~~~~g~CI~~~~~CDG~~DC~DgSDE~~~~C~~~ 95 (217)
T 2gtl_M 51 EHHCDEHESECRGDVPECIHDLLFCDGEKDCRDGSDEDPETCSLN 95 (217)
T ss_dssp CCCCCTTEEECSSSSCCEEEGGGTTSSSCCSSSSTTTSHHHHCCG
T ss_pred CCCCCCCceecCCCCCcEechhhccCCCCCCCCCCccccCcCCCC
Confidence 3579999999964 99999999999999999999998 78754
No 122
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=98.02 E-value=1.4e-06 Score=74.01 Aligned_cols=38 Identities=24% Similarity=0.645 Sum_probs=33.1
Q ss_pred ccccccCCCcccccceeCCCeeeeecCCCcccCCCCccc
Q psy948 1078 DECAKVETNQCGHKCVDTLTGYYCECNTGYNDDDIGTVS 1116 (1576)
Q Consensus 1078 dEC~~~~~~~Csq~C~Nt~Gsy~C~C~~Gy~l~~~~~~~ 1116 (1576)
|||+. .++.|+|+|+|++|||+|+|++||+|..++..+
T Consensus 2 dEC~~-~~~~C~~~C~nt~Gsy~C~C~~Gy~L~~d~~~C 39 (55)
T 2jkh_L 2 KLCSL-DNGDCDQFCHEEQNSVVCSCARGYTLADNGKAC 39 (55)
T ss_dssp CCTTT-GGGGCSSEEEEETTEEEEECCTTEEECTTSSCE
T ss_pred ccccC-CCCCcCcEeEcCCCCeEEeCCCCCEECCCCCee
Confidence 78976 578999999999999999999999997766544
No 123
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=97.96 E-value=3.7e-06 Score=70.90 Aligned_cols=40 Identities=35% Similarity=0.859 Sum_probs=33.1
Q ss_pred cCccccccC-------CCcccccceeCCCeeeeecCCCcccCCCCcc
Q psy948 1076 NVDECAKVE-------TNQCGHKCVDTLTGYYCECNTGYNDDDIGTV 1115 (1576)
Q Consensus 1076 didEC~~~~-------~~~Csq~C~Nt~Gsy~C~C~~Gy~l~~~~~~ 1115 (1576)
|||||+... .++|.|+|+|++|+|+|+|++||.|..++..
T Consensus 3 DidEC~~~~~~~~~~~~~~C~~~C~n~~Gsy~C~C~~Gy~~~~d~~~ 49 (53)
T 1apq_A 3 DLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHS 49 (53)
T ss_dssp SCCTTTCSTTTCCCSSSCTTSSEEEEETTEEEEECSTTCEECTTSSC
T ss_pred ccccccCcccccccccCCCCCCEeECCCCCeEEECCCCCeECCCCCc
Confidence 589998521 3789999999999999999999998765543
No 124
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.95 E-value=0.0014 Score=76.22 Aligned_cols=236 Identities=12% Similarity=0.019 Sum_probs=136.2
Q ss_pred eccCCeEEEEcCCCCeEEEEeCCCCceEEEEeCCCccceeEEeee--CCeEEEeccCCCcceeeccccccc-cccceecc
Q psy948 1249 DYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLF--EDHIYWTDWNTKSINRADKFNARE-IQAGILHH 1325 (1576)
Q Consensus 1249 D~~~~rlYw~D~~~~~I~s~~~dG~~r~~v~~~~~~~~P~~lavf--ed~lYwtd~~~~~i~~~~k~~~~~-~~~~~~~~ 1325 (1576)
+...+++|+++...+.|...++........+. .....| ++++. +.++|.+......|..++..++.. ... ..
T Consensus 6 ~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~-~~-- 80 (331)
T 3u4y_A 6 QTTSNFGIVVEQHLRRISFFSTDTLEILNQIT-LGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVA-IQ-- 80 (331)
T ss_dssp -CCCCEEEEEEGGGTEEEEEETTTCCEEEEEE-CCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEE-EE--
T ss_pred cCCCCEEEEEecCCCeEEEEeCcccceeeeEE-ccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEe-cc--
Confidence 44568899999999999999987555443333 234455 77774 457999988888887777655432 110 00
Q ss_pred cccccCCCcceeeccCCceeccCCCccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceeccCCceEEE
Q psy948 1326 CMNITGGSGYLCTCYQGFIIDKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKANDNKLTIV 1405 (1576)
Q Consensus 1326 c~n~~g~~~~~C~C~~G~~~~~~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~~~~~~ll 1405 (1576)
.+. .....+.+. |.|-.+ +
T Consensus 81 ----~~~-------------------------------~~~~~~~~s---------~dg~~l-----------------~ 99 (331)
T 3u4y_A 81 ----EGQ-------------------------------SSMADVDIT---------PDDQFA-----------------V 99 (331)
T ss_dssp ----ECS-------------------------------SCCCCEEEC---------TTSSEE-----------------E
T ss_pred ----cCC-------------------------------CCccceEEC---------CCCCEE-----------------E
Confidence 000 000001111 111111 1
Q ss_pred EecCC----ceeeeccccccccccccccccceeeecccCCcEEEEeecccce-eEEEeecccccceeeecccceeeeecc
Q psy948 1406 YSNGP----EIRAYETHKRRFRDVISDERRIEALDIDPVDEIIYWVDSYDRN-IRRSFMLEAQKGQVQAGFGQDLGIKSI 1480 (1576)
Q Consensus 1406 ~s~~~----~Ir~i~~~~~~~~~~v~~~~~i~ald~D~~~~~vYWsD~~~~~-I~r~~l~~~~~~~v~~~~~~~~~~~~~ 1480 (1576)
.+... .|+.+.+........+.....+.+++|++..++||.++...+. |....++... .+.... ...+...
T Consensus 100 ~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g--~~~~~~--~~~~~~~ 175 (331)
T 3u4y_A 100 TVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADG--VLFDTG--QEFISGG 175 (331)
T ss_dssp ECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTC--CEEEEE--EEEECSS
T ss_pred EecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCC--cEeecC--CccccCC
Confidence 11111 2333332222211222223456788999998889999887777 7665555321 111111 1112334
Q ss_pred CCcceeeecCCCCeEEEeecCCCCCCCCCeEEEEEcCCCce---EEEeeCCCCCceEEEEecCCCeEEEEecCCCCcEEE
Q psy948 1481 GKLTAIAVDWIAHNIYWTVSDRSGSKPKGKVMVAHNDGRYR---RSLVSENLESPSSIALDPTLGKMFWAETGASPRIES 1557 (1576)
Q Consensus 1481 ~~p~glAVDwv~~nLYWTD~~~~~~~~~~~I~v~~ldG~~~---~~lv~~~l~~P~~IavDp~~G~LYWTD~g~~~~Ier 1557 (1576)
..|.+|+++..++.||.+... .++|.+.++..... ...+. .-..|.+|+++|...+||.+..+.. .|..
T Consensus 176 ~~~~~~~~spdg~~l~v~~~~------~~~v~v~d~~~~~~~~~~~~~~-~~~~~~~~~~spdg~~l~v~~~~~~-~i~~ 247 (331)
T 3u4y_A 176 TRPFNITFTPDGNFAFVANLI------GNSIGILETQNPENITLLNAVG-TNNLPGTIVVSRDGSTVYVLTESTV-DVFN 247 (331)
T ss_dssp SSEEEEEECTTSSEEEEEETT------TTEEEEEECSSTTSCEEEEEEE-CSSCCCCEEECTTSSEEEEECSSEE-EEEE
T ss_pred CCccceEECCCCCEEEEEeCC------CCeEEEEECCCCcccceeeecc-CCCCCceEEECCCCCEEEEEEcCCC-EEEE
Confidence 568999999988889999864 57899999864432 22232 3477999999999888998876433 5777
Q ss_pred eecCC
Q psy948 1558 AWMDG 1562 (1576)
Q Consensus 1558 a~mDG 1562 (1576)
.++..
T Consensus 248 ~d~~~ 252 (331)
T 3u4y_A 248 FNQLS 252 (331)
T ss_dssp EETTT
T ss_pred EECCC
Confidence 77654
No 125
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=97.91 E-value=4.5e-06 Score=86.29 Aligned_cols=71 Identities=35% Similarity=0.858 Sum_probs=57.6
Q ss_pred cccccccCCCcceeeccCCceeccCC-------CccccCCCCccCCCCccc--cccccCCCceEEEcCCCcEecCCCCCc
Q psy948 1324 HHCMNITGGSGYLCTCYQGFIIDKNN-------AKKCLDVDECATGIHHCS--QVCTNLNGTYACSCNAGFTLSDGLSGV 1394 (1576)
Q Consensus 1324 ~~c~n~~g~~~~~C~C~~G~~~~~~~-------~~~c~d~neC~~~~~~Cs--~lC~n~~gsy~C~Cp~G~~l~d~~~~~ 1394 (1576)
+.|.++.++ |+|.|++||.+.... ...|++++||...++.|. +.|+|++|+|+|.|++||++..+.. .
T Consensus 59 ~~C~n~~g~--y~C~C~~Gy~g~~~~~~~~~~~~~~C~dideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~-~ 135 (143)
T 2bou_A 59 SDCWNTEGS--YDCVCSPGYEPVSGAKTFKNESENTCQDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIP-N 135 (143)
T ss_dssp EEEEECSSC--EEEEECTTEEETTCCSCBSSGGGCCEEECCHHHHTCCCCCTTSEEEECSSCEEEECCSSSCBCTTCC-S
T ss_pred CEEEcCCCC--eEeECCCCcccCcCccccccCCCCCcCCccCccCcCCCCCCCCEEECCCCCEEeeCCCCcccCCCCc-c
Confidence 467788876 999999999986321 357999999987677896 7999999999999999999975543 5
Q ss_pred eec
Q psy948 1395 CKA 1397 (1576)
Q Consensus 1395 C~~ 1397 (1576)
|..
T Consensus 136 C~~ 138 (143)
T 2bou_A 136 NQK 138 (143)
T ss_dssp SBT
T ss_pred Ccc
Confidence 654
No 126
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=97.90 E-value=4.3e-06 Score=69.80 Aligned_cols=41 Identities=27% Similarity=0.694 Sum_probs=34.5
Q ss_pred ccCCCCccccccccCCCceEEEcCCCcEecCCCCCceeccCC
Q psy948 1359 CATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKANDN 1400 (1576)
Q Consensus 1359 C~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~~~ 1400 (1576)
|+.++++|+|+|+|++|+|+|.|+.||.|..+.+ +|.++++
T Consensus 1 C~~~ng~C~~~C~n~~gs~~C~C~~Gy~L~~d~~-tC~dide 41 (51)
T 1kig_L 1 CSLDNGGCDQFCREERSEVRCSCAHGYVLGDDSK-SCVSTER 41 (51)
T ss_dssp CCTTTTSSSSCCCEETTEECCCCCTTEEECTTSS-CEEECSS
T ss_pred CCCCCCCcCCEeEcCCCCeEEeCCCCcEECCCCC-ccccCCc
Confidence 4556899999999999999999999999985543 7987654
No 127
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.88 E-value=0.0069 Score=73.34 Aligned_cols=297 Identities=14% Similarity=0.157 Sum_probs=162.3
Q ss_pred CCcceEEEeCCcceEEEecCCCcCeEEEEecCCCCcEEEEec---cCCCCCcceEEEeccCCeEEEEcCCCCeEEEEeCC
Q psy948 1195 QDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTH---EDDIAWPNALTLDYFTERLYWADAHLDYIASVDLD 1271 (1576)
Q Consensus 1195 ~~P~~iavdP~~g~lywtd~g~~~~I~ra~mdGs~~~~iv~~---~~~l~~P~gLaiD~~~~rlYw~D~~~~~I~s~~~d 1271 (1576)
..|.++++.| .+.+|.+... ...|..-++.......++.. ......+.++++ ...+++|.+......|...++.
T Consensus 123 ~~~~~~~~s~-~~~~~~~~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~s~~~d~~v~~~d~~ 199 (433)
T 3bws_A 123 FQPKSVRFID-NTRLAIPLLE-DEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISI-PEHNELWVSQMQANAVHVFDLK 199 (433)
T ss_dssp SCBCCCEESS-SSEEEEEBTT-SSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEE-GGGTEEEEEEGGGTEEEEEETT
T ss_pred CCceEEEEeC-CCeEEEEeCC-CCeEEEEECCCCeEeeecCcccccccCCceeEEEE-cCCCEEEEEECCCCEEEEEECC
Confidence 4578999999 7777777543 34566666664333222211 122335566777 4567888888888899998887
Q ss_pred CCceEEEEeCCCccceeEEeee--CCeEEEeccCCCcceeeccccccccccceecccccccCCCcceeeccCCceeccCC
Q psy948 1272 GKHKHIVISGQKVPHVFALTLF--EDHIYWTDWNTKSINRADKFNAREIQAGILHHCMNITGGSGYLCTCYQGFIIDKNN 1349 (1576)
Q Consensus 1272 G~~r~~v~~~~~~~~P~~lavf--ed~lYwtd~~~~~i~~~~k~~~~~~~~~~~~~c~n~~g~~~~~C~C~~G~~~~~~~ 1349 (1576)
.......+. .....|.++++. +.++|.+....+.|...+..+++..... ...
T Consensus 200 ~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~--------~~~----------------- 253 (433)
T 3bws_A 200 TLAYKATVD-LTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKT--------DKI----------------- 253 (433)
T ss_dssp TCCEEEEEE-CSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEC--------CCC-----------------
T ss_pred CceEEEEEc-CCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEe--------cCC-----------------
Confidence 654433333 223446666665 5578888877777766654333221100 000
Q ss_pred CccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceeccCCceEEEEecCCceeeecccccccccccccc
Q psy948 1350 AKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKANDNKLTIVYSNGPEIRAYETHKRRFRDVISDE 1429 (1576)
Q Consensus 1350 ~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~~~~~~ll~s~~~~Ir~i~~~~~~~~~~v~~~ 1429 (1576)
..-..+.+. |.|-.+.-. ...... .. .....|+.+.+........+...
T Consensus 254 --------------~~~~~~~~~---------~~g~~l~~~----~~~~~~-~~---~~dg~i~~~d~~~~~~~~~~~~~ 302 (433)
T 3bws_A 254 --------------GLPRGLLLS---------KDGKELYIA----QFSASN-QE---SGGGRLGIYSMDKEKLIDTIGPP 302 (433)
T ss_dssp --------------SEEEEEEEC---------TTSSEEEEE----EEESCT-TC---SCCEEEEEEETTTTEEEEEEEEE
T ss_pred --------------CCceEEEEc---------CCCCEEEEE----ECCCCc-cc---cCCCeEEEEECCCCcEEeeccCC
Confidence 000000000 111111000 000000 00 00112222322222111122222
Q ss_pred ccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCC-----
Q psy948 1430 RRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSG----- 1504 (1576)
Q Consensus 1430 ~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~----- 1504 (1576)
..+..+.|++..+.||.+....+.|+..++.... +.. .+.....|.+||+.+.++.||.+......
T Consensus 303 ~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~---~~~------~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~ 373 (433)
T 3bws_A 303 GNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKK---VQK------SIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGY 373 (433)
T ss_dssp ECEEEEEECSSTTEEEEEETTTTEEEEEETTTTE---EEE------EEECSSSEEEEEECTTSSEEEEEECCCCCTTTCT
T ss_pred CCcceEEECCCCCEEEEEecCCCEEEEEECCCCc---EEE------EecCCCCCCeEEEcCCCCEEEEEecCCCcccccc
Confidence 3567788999888999998888888777665322 111 12234568899999888889988764210
Q ss_pred ---CCCCCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEecCCCCcEEEeecCC
Q psy948 1505 ---SKPKGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAETGASPRIESAWMDG 1562 (1576)
Q Consensus 1505 ---~~~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~mDG 1562 (1576)
....++|.+.++........+.. ...|.+|++.|...+||.+..+. ..|....++|
T Consensus 374 ~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d-~~i~v~~~~~ 432 (433)
T 3bws_A 374 LKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDFLD-HQIRVYRRDG 432 (433)
T ss_dssp TSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEETTT-TEEEEEEETT
T ss_pred ccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEECCC-CeEEEEEecC
Confidence 00024899999865544444433 56799999999888888876432 3676666665
No 128
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=97.87 E-value=4.8e-06 Score=84.93 Aligned_cols=67 Identities=33% Similarity=0.751 Sum_probs=35.0
Q ss_pred cccccccCCCcceeeccCCceeccCCCccccC-C-CCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceecc
Q psy948 1324 HHCMNITGGSGYLCTCYQGFIIDKNNAKKCLD-V-DECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKAN 1398 (1576)
Q Consensus 1324 ~~c~n~~g~~~~~C~C~~G~~~~~~~~~~c~d-~-neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~ 1398 (1576)
..|.++.++ |+|.|++||. +..|.+ + ++|..++++|.+.|++++|+|+|.|++||+|..+.. +|...
T Consensus 54 g~C~~~~~~--y~C~C~~G~~-----G~~C~~~i~d~C~~~~~~C~~~C~~~~g~y~C~C~~Gy~l~~~g~-~C~~~ 122 (134)
T 2vh0_B 54 GKCKDGLGE--YTCTCLEGFE-----GKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGK-ACIPT 122 (134)
T ss_dssp ----------------------------------CCGGGTGGGGCSSEEEEETTEEEEECCTTEEECTTSS-CEEES
T ss_pred CCcccCCCC--EEeeCCCCcc-----CCccccCCCCccccCCCCCCCEeECCCCCEEEECCCCcEECCCCC-ccCcC
Confidence 357777765 9999999996 457877 6 899987889999999999999999999999875433 68754
No 129
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=97.86 E-value=5e-06 Score=89.76 Aligned_cols=68 Identities=32% Similarity=0.741 Sum_probs=35.7
Q ss_pred cccccccCCCcceeeccCCceeccCCCccccC-C-CCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceeccC
Q psy948 1324 HHCMNITGGSGYLCTCYQGFIIDKNNAKKCLD-V-DECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKAND 1399 (1576)
Q Consensus 1324 ~~c~n~~g~~~~~C~C~~G~~~~~~~~~~c~d-~-neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~~ 1399 (1576)
..|.++.++ |+|.|++||. +..|.+ + ++|...+++|.+.|+++.|+|+|.|++||+|..+.. +|....
T Consensus 54 g~C~n~~g~--y~C~C~~Gf~-----G~~Ce~~i~deC~~~~~~C~~~C~n~~gsy~C~C~~Gy~l~~dG~-~C~~~~ 123 (195)
T 1nfu_B 54 GKCKDGLGE--YTCTCLEGFE-----GKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGK-ACIPTG 123 (195)
T ss_dssp ----------------------------------CCGGGTGGGGCSSEEEEETTEEEEECCTTEEECTTSS-CEEESS
T ss_pred CEeECCCCC--eeEeCCCCce-----eccccccccccccCCCCCCCCEeECCCCCeEEECCCCceeCCCCC-ccccCC
Confidence 367777775 9999999996 467876 5 899987889999999999999999999999875433 687643
No 130
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.86 E-value=0.0008 Score=76.57 Aligned_cols=77 Identities=16% Similarity=0.132 Sum_probs=57.5
Q ss_pred CCcceEEEeccCCeEEEEcC--CCCeEEEEeCCCCceEEEEeCCCccceeEEeeeCCeEEEeccCCCcceeecccccccc
Q psy948 1241 AWPNALTLDYFTERLYWADA--HLDYIASVDLDGKHKHIVISGQKVPHVFALTLFEDHIYWTDWNTKSINRADKFNAREI 1318 (1576)
Q Consensus 1241 ~~P~gLaiD~~~~rlYw~D~--~~~~I~s~~~dG~~r~~v~~~~~~~~P~~lavfed~lYwtd~~~~~i~~~~k~~~~~~ 1318 (1576)
.+|.||+++.. ++||.+.. ..+.|..+++........+.-....++.++++.++.||++.|..+.+..++..+.+.+
T Consensus 21 ~f~~Gl~~~~d-g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~ 99 (266)
T 2iwa_A 21 AFTQGLVYAEN-DTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNI 99 (266)
T ss_dssp CCEEEEEECST-TEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTTTEEE
T ss_pred CCcccEEEeCC-CeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCCCcEE
Confidence 47899999865 79999976 3689999999754433322222345566889999999999999999998887655443
No 131
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.86 E-value=0.0022 Score=75.37 Aligned_cols=107 Identities=14% Similarity=0.113 Sum_probs=73.9
Q ss_pred ccceeeecccCCcEEEEeecccceeEEEeec--cc-cc--ceeeecccceeeee-ccCCcceeeecCCCCeEEEeecCCC
Q psy948 1430 RRIEALDIDPVDEIIYWVDSYDRNIRRSFML--EA-QK--GQVQAGFGQDLGIK-SIGKLTAIAVDWIAHNIYWTVSDRS 1503 (1576)
Q Consensus 1430 ~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~--~~-~~--~~v~~~~~~~~~~~-~~~~p~glAVDwv~~nLYWTD~~~~ 1503 (1576)
..+.++.+++..+.|||++...+.|++..++ .. .. ..+.. .+. ....|.||++|. .++||.+..+
T Consensus 179 ~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~------~~~~~~~~p~gi~~d~-~G~lwva~~~-- 249 (326)
T 2ghs_A 179 SIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFI------DSTGIKGGMDGSVCDA-EGHIWNARWG-- 249 (326)
T ss_dssp SSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEE------ECTTSSSEEEEEEECT-TSCEEEEEET--
T ss_pred cccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEE------ECCCCCCCCCeeEECC-CCCEEEEEeC--
Confidence 3456888898888999999888899988764 11 11 01111 011 235689999995 4578777643
Q ss_pred CCCCCCeEEEEEcCCCceEEEeeCCCCCceEEEEe-cCCCeEEEEecC
Q psy948 1504 GSKPKGKVMVAHNDGRYRRSLVSENLESPSSIALD-PTLGKMFWAETG 1550 (1576)
Q Consensus 1504 ~~~~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavD-p~~G~LYWTD~g 1550 (1576)
.+.|.+.+++|+..+.+ ......|.++++. |..++||.+...
T Consensus 250 ----~~~v~~~d~~g~~~~~i-~~~~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 250 ----EGAVDRYDTDGNHIARY-EVPGKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp ----TTEEEEECTTCCEEEEE-ECSCSBEEEEEEESTTSCEEEEEEBC
T ss_pred ----CCEEEEECCCCCEEEEE-ECCCCCcEEEEEecCCCCEEEEEecC
Confidence 36799998887754444 3345679999999 888899998764
No 132
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=97.84 E-value=9.3e-05 Score=85.50 Aligned_cols=122 Identities=12% Similarity=0.163 Sum_probs=86.9
Q ss_pred cccccccccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCC
Q psy948 1423 RDVISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDR 1502 (1576)
Q Consensus 1423 ~~~v~~~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~ 1502 (1576)
..+......+.++.|++..+.|||++...+.|++.+..+. .... ......|.+||+|. .++||+++.+
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~---------~~~~~~~~~l~~~~-dg~l~v~~~~- 88 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPE---------MHPSHHQNGHCLNK-QGHLIACSHG- 88 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEE---------ESSCSSEEEEEECT-TCCEEEEETT-
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEE---------ECCCCCcceeeECC-CCcEEEEecC-
Confidence 3333445667899999999899999999999998877653 1111 11235789999997 5679988864
Q ss_pred CCCCCCCeEEEEEc-CCCceEEEee----CCCCCceEEEEecCCCeEEEEec--CC--------------CCcEEEeecC
Q psy948 1503 SGSKPKGKVMVAHN-DGRYRRSLVS----ENLESPSSIALDPTLGKMFWAET--GA--------------SPRIESAWMD 1561 (1576)
Q Consensus 1503 ~~~~~~~~I~v~~l-dG~~~~~lv~----~~l~~P~~IavDp~~G~LYWTD~--g~--------------~~~Iera~mD 1561 (1576)
.+.|.+.++ +|+.+ .++. ..+..|.+|+++| .|.||+||. |. ..+|.+.+.+
T Consensus 89 -----~~~i~~~d~~~g~~~-~~~~~~~~~~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~ 161 (296)
T 3e5z_A 89 -----LRRLERQREPGGEWE-SIADSFEGKKLNSPNDVCLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD 161 (296)
T ss_dssp -----TTEEEEECSTTCCEE-EEECEETTEECCCCCCEEECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT
T ss_pred -----CCeEEEEcCCCCcEE-EEeeccCCCCCCCCCCEEECC-CCCEEEECCccccccccccccccccCCCcEEEEECCC
Confidence 468999988 66644 3332 1245788999998 689999874 21 3479998888
Q ss_pred CC
Q psy948 1562 GS 1563 (1576)
Q Consensus 1562 Gs 1563 (1576)
|.
T Consensus 162 g~ 163 (296)
T 3e5z_A 162 GT 163 (296)
T ss_dssp SC
T ss_pred CC
Confidence 55
No 133
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=97.83 E-value=7.3e-06 Score=68.95 Aligned_cols=41 Identities=24% Similarity=0.664 Sum_probs=34.6
Q ss_pred ccCCCCccccccccCCC-ceEEEcCCCcEecCCCCCceeccCC
Q psy948 1359 CATGIHHCSQVCTNLNG-TYACSCNAGFTLSDGLSGVCKANDN 1400 (1576)
Q Consensus 1359 C~~~~~~Cs~lC~n~~g-sy~C~Cp~G~~l~d~~~~~C~~~~~ 1400 (1576)
|+.+|++|+|+|+|++| +|+|+|+.||.|..+.+ +|.++++
T Consensus 2 C~~~nggC~~~C~n~~ggs~~C~C~~Gy~L~~Dg~-tC~d~de 43 (53)
T 2bz6_L 2 CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGV-SCTPTVE 43 (53)
T ss_dssp TTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSS-CEEECSS
T ss_pred CcCCCCCcCCEeEcCCCCCEEeeCCCCCEECCCCC-cccCCcc
Confidence 66678999999999998 89999999999985544 7987654
No 134
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.81 E-value=0.0083 Score=70.42 Aligned_cols=104 Identities=17% Similarity=0.140 Sum_probs=67.4
Q ss_pred eeEEecC--CCeEEEEeccCCceEec---ccccCCcceEEEeCCcceEEEecCCC-cCeEEEEecCCCCcEEEEeccC--
Q psy948 1167 LCALDVR--SIKLDVAELDGTNRKTL---KTAIQDPRGITLHPGIGYVYFSSWNL-QAYIGKIGMDGSNFTRILTHED-- 1238 (1576)
Q Consensus 1167 ~~avD~~--~~~I~v~~ldG~~r~~l---~~~l~~P~~iavdP~~g~lywtd~g~-~~~I~ra~mdGs~~~~iv~~~~-- 1238 (1576)
+|+++.. .+.|.+.++++...+.+ ......|.+|+++|...+||.+.+.. ...+.....+|...........
T Consensus 53 l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~ 132 (347)
T 3hfq_A 53 LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGH 132 (347)
T ss_dssp EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCC
T ss_pred EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCC
Confidence 5555543 46677777765443333 23467899999999999999998643 2345554445553322111111
Q ss_pred ------CCCCcceEEEeccCCeEEEEcCCCCeEEEEeCC
Q psy948 1239 ------DIAWPNALTLDYFTERLYWADAHLDYIASVDLD 1271 (1576)
Q Consensus 1239 ------~l~~P~gLaiD~~~~rlYw~D~~~~~I~s~~~d 1271 (1576)
...+|.+++++...+ ||.++...+.|...+++
T Consensus 133 ~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~ 170 (347)
T 3hfq_A 133 GPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVS 170 (347)
T ss_dssp CSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEEC
T ss_pred CCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEEC
Confidence 123577899988766 99999988888888876
No 135
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=97.79 E-value=1.1e-05 Score=69.34 Aligned_cols=40 Identities=28% Similarity=0.713 Sum_probs=33.5
Q ss_pred ccCCCCccccccccCC-CceEEEcCCCcEecCCCCCceeccC
Q psy948 1359 CATGIHHCSQVCTNLN-GTYACSCNAGFTLSDGLSGVCKAND 1399 (1576)
Q Consensus 1359 C~~~~~~Cs~lC~n~~-gsy~C~Cp~G~~l~d~~~~~C~~~~ 1399 (1576)
|+.+|++|+|+|+|++ |+|+|+|++||.|..+.+ +|.+..
T Consensus 2 C~~~nggC~~~C~n~~~gs~~C~C~~Gy~L~~D~~-tC~d~~ 42 (59)
T 2wph_E 2 CNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQK-SCEPAV 42 (59)
T ss_dssp TTTGGGGCSSEEEECSTTCEEEECCTTEEECTTSS-CEEESS
T ss_pred CcCCCCCcCCEeEeCCCCCEEeeCCCCcEECCCCC-cccCCC
Confidence 5667899999999999 699999999999985544 798643
No 136
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=97.75 E-value=7.7e-06 Score=68.24 Aligned_cols=34 Identities=21% Similarity=0.485 Sum_probs=29.6
Q ss_pred CCCcccccceeCCCeeeeecCCCcccCCCCcccC
Q psy948 1084 ETNQCGHKCVDTLTGYYCECNTGYNDDDIGTVSP 1117 (1576)
Q Consensus 1084 ~~~~Csq~C~Nt~Gsy~C~C~~Gy~l~~~~~~~~ 1117 (1576)
++++|+|+|+|++|||+|+|++||+|..+++.+.
T Consensus 4 ~ng~C~~~C~n~~gs~~C~C~~Gy~L~~d~~tC~ 37 (51)
T 1kig_L 4 DNGGCDQFCREERSEVRCSCAHGYVLGDDSKSCV 37 (51)
T ss_dssp TTTSSSSCCCEETTEECCCCCTTEEECTTSSCEE
T ss_pred CCCCcCCEeEcCCCCeEEeCCCCcEECCCCCccc
Confidence 5789999999999999999999999987665543
No 137
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=97.74 E-value=1.9e-05 Score=66.59 Aligned_cols=42 Identities=38% Similarity=0.965 Sum_probs=34.9
Q ss_pred cCCCCccCC--------CCccccccccCCCceEEEcCCCcEecCCCCCcee
Q psy948 1354 LDVDECATG--------IHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCK 1396 (1576)
Q Consensus 1354 ~d~neC~~~--------~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~ 1396 (1576)
+++|||... +++|+|+|+|++|+|+|.|+.||+|..+.+ +|.
T Consensus 2 ~DidEC~~~~~~~~~~~~~~C~~~C~n~~Gsy~C~C~~Gy~~~~d~~-~C~ 51 (53)
T 1apq_A 2 VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRH-SCQ 51 (53)
T ss_dssp CSCCTTTCSTTTCCCSSSCTTSSEEEEETTEEEEECSTTCEECTTSS-CEE
T ss_pred CccccccCcccccccccCCCCCCEeECCCCCeEEECCCCCeECCCCC-ccC
Confidence 478999864 478999999999999999999999975443 675
No 138
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.72 E-value=0.011 Score=69.89 Aligned_cols=116 Identities=17% Similarity=0.172 Sum_probs=74.9
Q ss_pred ccCCcceEEEeCCcceEEEecCC--CcCeEEEEecCCC--CcEEEEeccCCCCCcceEEEeccCCeEEEEcCCCCeEEEE
Q psy948 1193 AIQDPRGITLHPGIGYVYFSSWN--LQAYIGKIGMDGS--NFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASV 1268 (1576)
Q Consensus 1193 ~l~~P~~iavdP~~g~lywtd~g--~~~~I~ra~mdGs--~~~~iv~~~~~l~~P~gLaiD~~~~rlYw~D~~~~~I~s~ 1268 (1576)
....|++|+++|...+||.+... ....|..-.++.. ..+.+.........|.+|++ ..++||.++.....|...
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEE
Confidence 56789999999999999998874 2345544444432 22333332334568999998 677899999888888888
Q ss_pred eCCCCce-----EEEE-eC-------CCccceeEEeee--CCeEEEeccCCCcceee
Q psy948 1269 DLDGKHK-----HIVI-SG-------QKVPHVFALTLF--EDHIYWTDWNTKSINRA 1310 (1576)
Q Consensus 1269 ~~dG~~r-----~~v~-~~-------~~~~~P~~lavf--ed~lYwtd~~~~~i~~~ 1310 (1576)
+++.... ..+. .+ ...+||.++++. +.+||.++.....|...
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~ 182 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKF 182 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEE
Confidence 8763321 1111 11 124466777774 55799998877665543
No 139
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=97.70 E-value=2.1e-05 Score=81.09 Aligned_cols=68 Identities=25% Similarity=0.708 Sum_probs=53.5
Q ss_pred ccccccCCCcceeeccCCceeccCCCccccC-CCC---ccCCCCccccccccCCC-ceEEEcCCCcEecCCCCCceeccC
Q psy948 1325 HCMNITGGSGYLCTCYQGFIIDKNNAKKCLD-VDE---CATGIHHCSQVCTNLNG-TYACSCNAGFTLSDGLSGVCKAND 1399 (1576)
Q Consensus 1325 ~c~n~~g~~~~~C~C~~G~~~~~~~~~~c~d-~ne---C~~~~~~Cs~lC~n~~g-sy~C~Cp~G~~l~d~~~~~C~~~~ 1399 (1576)
.|.++.++ |+|.|+.||. +..|.+ +++ |...+++|+|.|+++.| +|+|.|++||+|..+.. +|....
T Consensus 60 ~C~~~~g~--y~C~C~~G~~-----G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~dG~-~C~~~~ 131 (142)
T 2c4f_L 60 SCKDQLQS--YICFCLPAFE-----GRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGV-SCTPTV 131 (142)
T ss_dssp EEEEETTE--EEEECCTTEE-----STTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTEEECTTSS-CEEESS
T ss_pred EEeCCCCC--EEeeCCCCcc-----CCccccCccccccccCCCCCccCEeECCCCCCEEEECCCCceECCCCC-CCCCCC
Confidence 57777765 9999999996 456775 566 45567899999999999 99999999999874433 687544
Q ss_pred C
Q psy948 1400 N 1400 (1576)
Q Consensus 1400 ~ 1400 (1576)
+
T Consensus 132 e 132 (142)
T 2c4f_L 132 E 132 (142)
T ss_dssp S
T ss_pred c
Confidence 3
No 140
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.69 E-value=0.00025 Score=84.71 Aligned_cols=129 Identities=14% Similarity=0.098 Sum_probs=87.1
Q ss_pred cccccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCC---CCeEEEeecC-C
Q psy948 1427 SDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWI---AHNIYWTVSD-R 1502 (1576)
Q Consensus 1427 ~~~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv---~~nLYWTD~~-~ 1502 (1576)
..+..+.+|++++. ++||+++.. ++|+++..++. +.+.... +...+...|.|||++.- ++.||.+++. .
T Consensus 26 ~~l~~P~~ia~~pd-G~l~V~e~~-g~I~~~d~~G~---~~~~~~~--v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~ 98 (354)
T 3a9g_A 26 SDLEVPWSIAPLGG-GRYLVTERP-GRLVLISPSGK---KLVASFD--VANVGEAGLLGLALHPEFPKKSWVYLYASYFA 98 (354)
T ss_dssp CSCSCEEEEEEEET-TEEEEEETT-TEEEEECSSCE---EEEEECC--CCCSTTCSEEEEEECTTTTTSCEEEEEEEEEC
T ss_pred CCCCCCeEEEEcCC-CeEEEEeCC-CEEEEEeCCCc---eEeeccc--eeecCCCceeeEEeCCCCCcCCEEEEEEeccC
Confidence 44667899999874 579999876 88988753332 2222111 22234568999999987 7899999862 1
Q ss_pred CCCCCCCeEEEEEcCCC-----ceEEEee----CCCCCceEEEEecCCCeEEEEecC------------CCCcEEEeecC
Q psy948 1503 SGSKPKGKVMVAHNDGR-----YRRSLVS----ENLESPSSIALDPTLGKMFWAETG------------ASPRIESAWMD 1561 (1576)
Q Consensus 1503 ~~~~~~~~I~v~~ldG~-----~~~~lv~----~~l~~P~~IavDp~~G~LYWTD~g------------~~~~Iera~mD 1561 (1576)
......++|.+..+++. ..++|+. .....|.+|+++| .|+||++... ...+|.|.+.|
T Consensus 99 ~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~p-DG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~d 177 (354)
T 3a9g_A 99 EGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGP-DGMLYITTGDAADPRLAQDLSSLAGKILRVDEE 177 (354)
T ss_dssp GGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECT-TSCEEEECCCTTCGGGGTCTTCCSSEEEEECTT
T ss_pred CCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECC-CCcEEEEECCCCCCccccCCCCCCeEEEEEcCC
Confidence 00001157888888775 2455543 2345789999999 6899999731 12589999999
Q ss_pred CC
Q psy948 1562 GS 1563 (1576)
Q Consensus 1562 Gs 1563 (1576)
|+
T Consensus 178 G~ 179 (354)
T 3a9g_A 178 GR 179 (354)
T ss_dssp SC
T ss_pred CC
Confidence 97
No 141
>3ojy_B Complement component C8 beta chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=97.68 E-value=2.9e-05 Score=97.20 Aligned_cols=46 Identities=33% Similarity=0.713 Sum_probs=36.0
Q ss_pred CeEeeC-CCCeecCCCCCCCcCCCCCCCCccCCCCCCCCCceecCCCCeeec
Q psy948 344 GSFQCD-NGNCTPSASICDGVDDCRDGSDEKHCDLPCPDLEFKCASNGRCIL 394 (1576)
Q Consensus 344 ~~f~C~-~g~Ci~~~~~CDg~~dC~dgsDE~~C~~~C~~~~f~C~~~~~Ci~ 394 (1576)
.+|+|. +|+||+..|+|||.+||.|+|||.+|. ..++.|.. .++||
T Consensus 69 ~~f~C~~~g~Ci~~~~~Cdg~~dC~d~sdE~~c~----~~~~~C~~-~~~~~ 115 (537)
T 3ojy_B 69 EGFVCAQTGRCVNRRLLCNGDNDCGDQSDEANCR----RIYKKCQH-EMDQY 115 (537)
T ss_dssp SSEECTTTCCEECGGGTTSSSCCSSSSCTTSSCS----SCSSCCSS-CCBCC
T ss_pred CccCcCCCCcEeeccccCCCCCCCCCccccccCC----CCCCcccc-CcCCC
Confidence 789998 899999999999999999999998765 34456642 34554
No 142
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.66 E-value=0.0028 Score=73.07 Aligned_cols=135 Identities=14% Similarity=0.110 Sum_probs=86.8
Q ss_pred ecCCCeEEEEecc-CCceEecc----cccCCcceEEEeCCcceEEEecCCCcCeEEEEecCCCCcEEE-Eecc--CCCCC
Q psy948 1171 DVRSIKLDVAELD-GTNRKTLK----TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRI-LTHE--DDIAW 1242 (1576)
Q Consensus 1171 D~~~~~I~v~~ld-G~~r~~l~----~~l~~P~~iavdP~~g~lywtd~g~~~~I~ra~mdGs~~~~i-v~~~--~~l~~ 1242 (1576)
+...+.|.+.++. |..+.... .....|.+|+++|..|.||+++.+. .|.+.+++|.- +.+ .... .....
T Consensus 42 ~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~--~l~~~d~~g~~-~~~~~~~~~~~~~~~ 118 (314)
T 1pjx_A 42 GKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRL--GLLVVQTDGTF-EEIAKKDSEGRRMQG 118 (314)
T ss_dssp TEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTT--EEEEEETTSCE-EECCSBCTTSCBCBC
T ss_pred CCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCC--CEEEEeCCCCE-EEEEeccCCCccccC
Confidence 4445566666643 33322211 1236799999999879999988643 78888887432 222 1111 12356
Q ss_pred cceEEEeccCCeEEEEcCCC---------------CeEEEEeCCCCceEEEEeCCCccceeEEeee----CC--eEEEec
Q psy948 1243 PNALTLDYFTERLYWADAHL---------------DYIASVDLDGKHKHIVISGQKVPHVFALTLF----ED--HIYWTD 1301 (1576)
Q Consensus 1243 P~gLaiD~~~~rlYw~D~~~---------------~~I~s~~~dG~~r~~v~~~~~~~~P~~lavf----ed--~lYwtd 1301 (1576)
|++|++|. .++||+++... ..|..++.+|+-+.+ .. .+..|.+|++. .+ +||+++
T Consensus 119 ~~~i~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~-~~--~~~~~~~i~~~~~~d~dg~~l~v~~ 194 (314)
T 1pjx_A 119 CNDCAFDY-EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQMIQV-DT--AFQFPNGIAVRHMNDGRPYQLIVAE 194 (314)
T ss_dssp CCEEEECT-TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCEEEE-EE--EESSEEEEEEEECTTSCEEEEEEEE
T ss_pred CcCEEECC-CCCEEEEecCcccccccccccccCCCCeEEEECCCCCEEEe-cc--CCCCcceEEEecccCCCCCEEEEEE
Confidence 99999997 46899998764 578888877554333 22 24567788877 43 799999
Q ss_pred cCCCcceeecc
Q psy948 1302 WNTKSINRADK 1312 (1576)
Q Consensus 1302 ~~~~~i~~~~k 1312 (1576)
.....|.+.+.
T Consensus 195 ~~~~~i~~~~~ 205 (314)
T 1pjx_A 195 TPTKKLWSYDI 205 (314)
T ss_dssp TTTTEEEEEEE
T ss_pred CCCCeEEEEEC
Confidence 88888777653
No 143
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=97.65 E-value=2.6e-05 Score=72.96 Aligned_cols=40 Identities=28% Similarity=0.572 Sum_probs=33.1
Q ss_pred cccCccccccCCCccc-ccceeCCCeeeeecCCCcccCCCCc
Q psy948 1074 HCNVDECAKVETNQCG-HKCVDTLTGYYCECNTGYNDDDIGT 1114 (1576)
Q Consensus 1074 ~cdidEC~~~~~~~Cs-q~C~Nt~Gsy~C~C~~Gy~l~~~~~ 1114 (1576)
+-|||||+. .+..|. +.|+|++|+|+|.|++||.|.+++.
T Consensus 43 C~dideC~~-~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~~~ 83 (86)
T 1lmj_A 43 CMDIDECQR-DPLLCRGGVCHNTEGSYRCECPPGHQLSPNIS 83 (86)
T ss_dssp EEECCHHHH-CSSTTTTSEEEEETTEEEEESCTTSCCCSSSC
T ss_pred cCCcccccC-CCCcCCCCEeEcCCCCEEEECcCCcccCCCCC
Confidence 337999986 466786 5999999999999999999876544
No 144
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=97.63 E-value=0.047 Score=68.92 Aligned_cols=322 Identities=10% Similarity=0.025 Sum_probs=169.2
Q ss_pred eeEEecCCCeEEEEeccC-CceEecccccCCcceEEEeCCcceEEEecCCCcCeEEEEecCCCCcEEEEeccCCCCCcce
Q psy948 1167 LCALDVRSIKLDVAELDG-TNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNA 1245 (1576)
Q Consensus 1167 ~~avD~~~~~I~v~~ldG-~~r~~l~~~l~~P~~iavdP~~g~lywtd~g~~~~I~ra~mdGs~~~~iv~~~~~l~~P~g 1245 (1576)
+|++....++|.+.++.. ....++..+. .|.++++.|...+||-+..+ ..|...+++....+.+... ..-..|.+
T Consensus 151 ~~vs~~~d~~V~v~D~~t~~~~~~i~~g~-~~~~v~~spdg~~l~v~~~d--~~V~v~D~~~~t~~~~~~i-~~g~~p~~ 226 (543)
T 1nir_A 151 FSVTLRDAGQIALVDGDSKKIVKVIDTGY-AVHISRMSASGRYLLVIGRD--ARIDMIDLWAKEPTKVAEI-KIGIEARS 226 (543)
T ss_dssp EEEEEGGGTEEEEEETTTCCEEEEEECST-TEEEEEECTTSCEEEEEETT--SEEEEEETTSSSCEEEEEE-ECCSEEEE
T ss_pred EEEEEcCCCeEEEEECCCceEEEEEecCc-ccceEEECCCCCEEEEECCC--CeEEEEECcCCCCcEEEEE-ecCCCcce
Confidence 344555556666665432 2223333232 38999999999999999876 6677777742222222222 23467999
Q ss_pred EEEec----cCCeEEEEcCCCCeEEEEeCCCCceEEEEeCCC----------ccceeEEeee--CCeEEEeccCCCccee
Q psy948 1246 LTLDY----FTERLYWADAHLDYIASVDLDGKHKHIVISGQK----------VPHVFALTLF--EDHIYWTDWNTKSINR 1309 (1576)
Q Consensus 1246 LaiD~----~~~rlYw~D~~~~~I~s~~~dG~~r~~v~~~~~----------~~~P~~lavf--ed~lYwtd~~~~~i~~ 1309 (1576)
|++.. ..++||.+......|..++.........+.... -+++.+|.+. ..++|.+...++.|..
T Consensus 227 va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~v 306 (543)
T 1nir_A 227 VESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLL 306 (543)
T ss_dssp EEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEE
T ss_pred EEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEE
Confidence 99998 889999998888888888765443333332211 1245566553 5678888777777776
Q ss_pred eccccccccccceecccccccCCCcceeeccCCceeccCCCccccCCCCccCCCCccccccccCCCceEEEcCCCcEecC
Q psy948 1310 ADKFNAREIQAGILHHCMNITGGSGYLCTCYQGFIIDKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSD 1389 (1576)
Q Consensus 1310 ~~k~~~~~~~~~~~~~c~n~~g~~~~~C~C~~G~~~~~~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d 1389 (1576)
++.-+.+....... . .+. + +.++...+
T Consensus 307 vd~~~~~~l~~~~i----~-~~~--~----------------------------------------------~~~~~~sp 333 (543)
T 1nir_A 307 VNYKDIDNLTVTSI----G-AAP--F----------------------------------------------LHDGGWDS 333 (543)
T ss_dssp EECTTSSSCEEEEE----E-CCS--S----------------------------------------------CCCEEECT
T ss_pred EEecCCCcceeEEe----c-cCc--C----------------------------------------------ccCceECC
Confidence 66443322110000 0 000 0 00111111
Q ss_pred CCCCceeccCCceEEEEe-cCCceeeecccccccccccc-----ccccceeeecccCCcEEEEeec-ccceeEEEeeccc
Q psy948 1390 GLSGVCKANDNKLTIVYS-NGPEIRAYETHKRRFRDVIS-----DERRIEALDIDPVDEIIYWVDS-YDRNIRRSFMLEA 1462 (1576)
Q Consensus 1390 ~~~~~C~~~~~~~~ll~s-~~~~Ir~i~~~~~~~~~~v~-----~~~~i~ald~D~~~~~vYWsD~-~~~~I~r~~l~~~ 1462 (1576)
+. ..+++.. ....|..+.+........+. ...+...+ +++..+.+|.+.. ..++|....++..
T Consensus 334 dg---------~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~ 403 (543)
T 1nir_A 334 SH---------RYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPK 403 (543)
T ss_dssp TS---------CEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTT
T ss_pred CC---------CEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCC
Confidence 11 0111111 11223333322221111111 11112222 3566677777654 4577765555431
Q ss_pred cc----ceeeecccceeeeec-cCCcceeeecCCCCeEEEeecCCCCCCCCCeEEEEEcCCC-ce-EEE-e------eCC
Q psy948 1463 QK----GQVQAGFGQDLGIKS-IGKLTAIAVDWIAHNIYWTVSDRSGSKPKGKVMVAHNDGR-YR-RSL-V------SEN 1528 (1576)
Q Consensus 1463 ~~----~~v~~~~~~~~~~~~-~~~p~glAVDwv~~nLYWTD~~~~~~~~~~~I~v~~ldG~-~~-~~l-v------~~~ 1528 (1576)
.. .+++. . +.. .+.+..|++.+.+++||-........+..++|.|.+++.. .. ++| | ...
T Consensus 404 ~~~~~~~~~v~----~--l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~ 477 (543)
T 1nir_A 404 NHPQYAWKKVA----E--LQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEG 477 (543)
T ss_dssp TCTTTBTSEEE----E--EECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSS
T ss_pred CCchhcCeEEE----E--EEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCC
Confidence 10 11111 1 111 1346779999988888866421000001358999998643 33 333 1 344
Q ss_pred CCCceEEEEecCCCeEEEEecC---CCCcEEEeecC
Q psy948 1529 LESPSSIALDPTLGKMFWAETG---ASPRIESAWMD 1561 (1576)
Q Consensus 1529 l~~P~~IavDp~~G~LYWTD~g---~~~~Iera~mD 1561 (1576)
...|+.+++.|.-.+||.+.|. ....|...+..
T Consensus 478 ~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~ 513 (543)
T 1nir_A 478 AKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDK 513 (543)
T ss_dssp CCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETT
T ss_pred CCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECC
Confidence 5778899999999999999884 23567765543
No 145
>3ojy_B Complement component C8 beta chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=97.60 E-value=4.3e-05 Score=95.62 Aligned_cols=46 Identities=30% Similarity=0.640 Sum_probs=37.4
Q ss_pred CceecC-CCeEEeCcccCCCCCCCCCCCCCCCcccccccCCceecCCCceec
Q psy948 552 SEFQCK-NGKCIPAQWRCDHDEDCTDGSDEMECGGFQCKNGTFQCSSGHCIA 602 (1576)
Q Consensus 552 ~~f~C~-~g~Ci~~~~~CDg~~DC~dgsDE~~C~~~~C~~~~f~C~~g~Ci~ 602 (1576)
.+|+|. +|+||+..|+|||+.||.|||||.+|.. .++.|..+.+|+
T Consensus 69 ~~f~C~~~g~Ci~~~~~Cdg~~dC~d~sdE~~c~~-----~~~~C~~~~~~~ 115 (537)
T 3ojy_B 69 EGFVCAQTGRCVNRRLLCNGDNDCGDQSDEANCRR-----IYKKCQHEMDQY 115 (537)
T ss_dssp SSEECTTTCCEECGGGTTSSSCCSSSSCTTSSCSS-----CSSCCSSCCBCC
T ss_pred CccCcCCCCcEeeccccCCCCCCCCCccccccCCC-----CCCccccCcCCC
Confidence 789999 8999999999999999999999998763 345666555554
No 146
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=97.58 E-value=1.9e-05 Score=66.43 Aligned_cols=37 Identities=27% Similarity=0.603 Sum_probs=30.8
Q ss_pred ccccCCCcccccceeCCC-eeeeecCCCcccCCCCcccC
Q psy948 1080 CAKVETNQCGHKCVDTLT-GYYCECNTGYNDDDIGTVSP 1117 (1576)
Q Consensus 1080 C~~~~~~~Csq~C~Nt~G-sy~C~C~~Gy~l~~~~~~~~ 1117 (1576)
|+. ++++|+|+|+|++| ||+|+|++||+|..+++.+.
T Consensus 2 C~~-~nggC~~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~ 39 (53)
T 2bz6_L 2 CVN-ENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCT 39 (53)
T ss_dssp TTS-GGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEE
T ss_pred CcC-CCCCcCCEeEcCCCCCEEeeCCCCCEECCCCCccc
Confidence 443 46899999999999 89999999999987766543
No 147
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.55 E-value=0.016 Score=69.01 Aligned_cols=129 Identities=11% Similarity=0.042 Sum_probs=73.6
Q ss_pred ceeeecccCCcEEEEeecccceeEEEeecccccceeee-cccceee---eeccC-------Ccceee-ecCCCCeEEEee
Q psy948 1432 IEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQA-GFGQDLG---IKSIG-------KLTAIA-VDWIAHNIYWTV 1499 (1576)
Q Consensus 1432 i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~-~~~~~~~---~~~~~-------~p~glA-VDwv~~nLYWTD 1499 (1576)
+..++|++..+.||.+....+.|....++... +.+.. ....... +.+.. .|.+|+ +++.++.||-++
T Consensus 195 p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~-g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~ 273 (365)
T 1jof_A 195 PRWVAMHPTGNYLYALMEAGNRICEYVIDPAT-HMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASS 273 (365)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTT-CCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEE
T ss_pred CCEeEECCCCCEEEEEECCCCeEEEEEEeCCC-CcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEEC
Confidence 55667777777777776655555444333211 11100 0000000 00111 478999 999999999887
Q ss_pred cCCCCCCCCCeEEEEEcC--CCceEE--EeeCCCCCceEEEEec---CCCeEEEEecCCCCcEEEeecCCC
Q psy948 1500 SDRSGSKPKGKVMVAHND--GRYRRS--LVSENLESPSSIALDP---TLGKMFWAETGASPRIESAWMDGS 1563 (1576)
Q Consensus 1500 ~~~~~~~~~~~I~v~~ld--G~~~~~--lv~~~l~~P~~IavDp---~~G~LYWTD~g~~~~Iera~mDGs 1563 (1576)
.+... ...++|.+.+++ |+..++ ++......|++|++.| ..++||.+.... ..|....+++.
T Consensus 274 ~~~~~-~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~-~~v~v~~~~~~ 342 (365)
T 1jof_A 274 RANKF-ELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQE-GWLEIYRWKDE 342 (365)
T ss_dssp EESST-TSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSS-CEEEEEEEETT
T ss_pred CCCCC-CCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCC-CeEEEEEEchh
Confidence 64110 001278888874 443332 2333456799999999 577899887643 36776777766
No 148
>3ojy_A Complement component C8 alpha chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=97.54 E-value=5e-05 Score=95.14 Aligned_cols=37 Identities=49% Similarity=1.163 Sum_probs=32.5
Q ss_pred CCCCCceecC-CCeEEeCcccCCCCCCCCCCCCCCCccc
Q psy948 548 QCSESEFQCK-NGKCIPAQWRCDHDEDCTDGSDEMECGG 585 (1576)
Q Consensus 548 ~C~~~~f~C~-~g~Ci~~~~~CDg~~DC~dgsDE~~C~~ 585 (1576)
.|. .+|+|. +|+|||..|+|||+.||.|+|||.+|..
T Consensus 65 ~c~-~~f~C~~~g~Ci~~~~~Cdg~~dC~d~sDE~~C~~ 102 (554)
T 3ojy_A 65 QCG-QDFQCKETGRCLKRHLVCNGDQDCLDGSDEDDCED 102 (554)
T ss_dssp CCS-SSEECSSSCCEECGGGTTSSSCCSSSCTTSSSCCS
T ss_pred CCC-CcCccCCCCEEcccccccCCcccCCCccccccCCC
Confidence 453 689998 9999999999999999999999999863
No 149
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.53 E-value=0.00039 Score=83.01 Aligned_cols=129 Identities=17% Similarity=0.120 Sum_probs=87.8
Q ss_pred cccccccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCC---CCeEEEeecC
Q psy948 1425 VISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWI---AHNIYWTVSD 1501 (1576)
Q Consensus 1425 ~v~~~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv---~~nLYWTD~~ 1501 (1576)
+...+..+.+|++++.. +||.++.. ++|+++. ++. . +.+.... +...+...|.|||++.- ++.||.+++.
T Consensus 26 va~~l~~P~~ia~~pdG-~l~V~e~~-g~I~~i~-~g~-~-~~~~~~~--v~~~g~~~p~gia~~pdf~~~g~lYv~~~~ 98 (352)
T 2ism_A 26 VVGGLEVPWALAFLPDG-GMLIAERP-GRIRLFR-EGR-L-STYAELS--VYHRGESGLLGLALHPRFPQEPYVYAYRTV 98 (352)
T ss_dssp EECCCSCEEEEEECTTS-CEEEEETT-TEEEEEE-TTE-E-EEEEECC--CCCSTTCSEEEEEECTTTTTSCEEEEEEEE
T ss_pred EECCCCCceEEEEcCCC-eEEEEeCC-CeEEEEE-CCC-c-cEeecce--EeecCCCCceeEEECCCCCCCCEEEEEEec
Confidence 33456788999999765 69999876 8898876 432 1 1111111 22345678999999987 7899999874
Q ss_pred CCCCCCCCeEEEEEcCCC---ceEEEee------CCCCCceEEEEecCCCeEEEEecC------------CCCcEEEeec
Q psy948 1502 RSGSKPKGKVMVAHNDGR---YRRSLVS------ENLESPSSIALDPTLGKMFWAETG------------ASPRIESAWM 1560 (1576)
Q Consensus 1502 ~~~~~~~~~I~v~~ldG~---~~~~lv~------~~l~~P~~IavDp~~G~LYWTD~g------------~~~~Iera~m 1560 (1576)
... ...++|.+..+++. ..++|+. .....|.+|+++| .|+||+++.. ...+|.|.+.
T Consensus 99 ~~~-~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~ 176 (352)
T 2ism_A 99 AEG-GLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGP-DGMLYVTTGEVYERELAQDLASLGGKILRLTP 176 (352)
T ss_dssp CTT-SSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECT-TSCEEEECCCTTCGGGGGCTTCSSSEEEEECT
T ss_pred CCC-CCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECC-CCCEEEEECCCCCCccccCCCCCceEEEEEcC
Confidence 211 01267888888764 3445543 2345789999999 5899999742 1258999999
Q ss_pred CC
Q psy948 1561 DG 1562 (1576)
Q Consensus 1561 DG 1562 (1576)
||
T Consensus 177 dG 178 (352)
T 2ism_A 177 EG 178 (352)
T ss_dssp TS
T ss_pred CC
Confidence 99
No 150
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.51 E-value=0.0076 Score=70.29 Aligned_cols=143 Identities=16% Similarity=0.178 Sum_probs=98.3
Q ss_pred ceeEEecCCCeEEEEeccCCceEecc-cccCCcceEEEeCCcceEEEecCCC---cCeEEEEecCCCCcEEEEeccCCCC
Q psy948 1166 PLCALDVRSIKLDVAELDGTNRKTLK-TAIQDPRGITLHPGIGYVYFSSWNL---QAYIGKIGMDGSNFTRILTHEDDIA 1241 (1576)
Q Consensus 1166 ~~~avD~~~~~I~v~~ldG~~r~~l~-~~l~~P~~iavdP~~g~lywtd~g~---~~~I~ra~mdGs~~~~iv~~~~~l~ 1241 (1576)
.+++++...+.|.+.++++...+.+. .....|.+|+++|. |.||++..+. ...|.+..+++...+.++.......
T Consensus 57 ~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~d-g~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~ 135 (333)
T 2dg1_A 57 QLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKD-GRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAY 135 (333)
T ss_dssp CEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTT-SCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCC
T ss_pred CEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCC-CcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCC
Confidence 35667777788888888765444432 33467999999986 5677776543 2578888888877665544223346
Q ss_pred CcceEEEeccCCeEEEEcCC------CCeEEEEeCCCCceEEEEeCCCccceeEEeeeC--CeEEEeccCCCcceeecc
Q psy948 1242 WPNALTLDYFTERLYWADAH------LDYIASVDLDGKHKHIVISGQKVPHVFALTLFE--DHIYWTDWNTKSINRADK 1312 (1576)
Q Consensus 1242 ~P~gLaiD~~~~rlYw~D~~------~~~I~s~~~dG~~r~~v~~~~~~~~P~~lavfe--d~lYwtd~~~~~i~~~~k 1312 (1576)
.|++|++|. .++||+++.. ...|..++.++.....+.. .+..|.+|++.. .+||+++.....|.+.+.
T Consensus 136 ~~~~i~~d~-~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~ 211 (333)
T 2dg1_A 136 CIDDMVFDS-KGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ--NISVANGIALSTDEKVLWVTETTANRLHRIAL 211 (333)
T ss_dssp CEEEEEECT-TSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE--EESSEEEEEECTTSSEEEEEEGGGTEEEEEEE
T ss_pred cccceEECC-CCCEEEEeccccccCCCceEEEEeCCCCEEEEeec--CCCcccceEECCCCCEEEEEeCCCCeEEEEEe
Confidence 799999997 4689988764 3578888877655444432 245678887754 379999877777776654
No 151
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.48 E-value=0.066 Score=65.10 Aligned_cols=106 Identities=13% Similarity=-0.032 Sum_probs=67.5
Q ss_pred eeEEecCC----CeEEEEeccCCceEec--ccccCCcceEEEeCCcceEEEecCC--------CcCeEEEEecCCCCc-E
Q psy948 1167 LCALDVRS----IKLDVAELDGTNRKTL--KTAIQDPRGITLHPGIGYVYFSSWN--------LQAYIGKIGMDGSNF-T 1231 (1576)
Q Consensus 1167 ~~avD~~~----~~I~v~~ldG~~r~~l--~~~l~~P~~iavdP~~g~lywtd~g--------~~~~I~ra~mdGs~~-~ 1231 (1576)
+|..+... ++|.|.++. ..+++ +..-..| +|++.|...+||.+++. ....|...+..-... .
T Consensus 87 vyV~n~~~~~~~~~VsVID~~--t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~ 163 (426)
T 3c75_H 87 VYIQDPAHFAAITQQFVIDGS--TGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIA 163 (426)
T ss_dssp EEEEECTTTCSSEEEEEEETT--TTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEE
T ss_pred EEEECCCcCCCCCeEEEEECC--CCEEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEE
Confidence 45566544 455555543 33333 2223469 99999999999999863 223555554433222 2
Q ss_pred EEEec-cC---CCCCcceEEEeccCCeEEEEcCC-CCeEEEEeCCCCce
Q psy948 1232 RILTH-ED---DIAWPNALTLDYFTERLYWADAH-LDYIASVDLDGKHK 1275 (1576)
Q Consensus 1232 ~iv~~-~~---~l~~P~gLaiD~~~~rlYw~D~~-~~~I~s~~~dG~~r 1275 (1576)
+|... .. ....|.+++++...++||.+... .+.|..+++.....
T Consensus 164 ~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kv 212 (426)
T 3c75_H 164 DIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTF 212 (426)
T ss_dssp EEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEE
T ss_pred EEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeE
Confidence 23221 00 13579999999999999999875 78899998876543
No 152
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=97.47 E-value=3.8e-05 Score=66.03 Aligned_cols=33 Identities=18% Similarity=0.544 Sum_probs=28.9
Q ss_pred CCCcccccceeCC-CeeeeecCCCcccCCCCccc
Q psy948 1084 ETNQCGHKCVDTL-TGYYCECNTGYNDDDIGTVS 1116 (1576)
Q Consensus 1084 ~~~~Csq~C~Nt~-Gsy~C~C~~Gy~l~~~~~~~ 1116 (1576)
++++|+|+|+|++ |||+|+|++||+|.+++..+
T Consensus 5 ~nggC~~~C~n~~~gs~~C~C~~Gy~L~~D~~tC 38 (59)
T 2wph_E 5 KNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSC 38 (59)
T ss_dssp GGGGCSSEEEECSTTCEEEECCTTEEECTTSSCE
T ss_pred CCCCcCCEeEeCCCCCEEeeCCCCcEECCCCCcc
Confidence 5689999999999 69999999999998776554
No 153
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=97.46 E-value=0.071 Score=61.39 Aligned_cols=72 Identities=7% Similarity=-0.104 Sum_probs=52.2
Q ss_pred CCcceeeecCCCCeEEEeecCCCCCCCCCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEecCCCCcEEEeec
Q psy948 1481 GKLTAIAVDWIAHNIYWTVSDRSGSKPKGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAETGASPRIESAWM 1560 (1576)
Q Consensus 1481 ~~p~glAVDwv~~nLYWTD~~~~~~~~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~m 1560 (1576)
..|.+|++++.++.||.++ ++|.+.++........+. .-..|.+|+++|...+||.+.. ...|...++
T Consensus 241 ~~~~~~~~s~dg~~l~~~~---------~~v~~~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~--~~~i~v~d~ 308 (337)
T 1pby_B 241 VFYFSTAVNPAKTRAFGAY---------NVLESFDLEKNASIKRVP-LPHSYYSVNVSTDGSTVWLGGA--LGDLAAYDA 308 (337)
T ss_dssp SCEEEEEECTTSSEEEEEE---------SEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSCEEEEESB--SSEEEEEET
T ss_pred CceeeEEECCCCCEEEEeC---------CeEEEEECCCCcCcceec-CCCceeeEEECCCCCEEEEEcC--CCcEEEEEC
Confidence 3577899999888898883 469999987654433443 2357999999998888888733 457888877
Q ss_pred CCCC
Q psy948 1561 DGSH 1564 (1576)
Q Consensus 1561 DGs~ 1564 (1576)
....
T Consensus 309 ~~~~ 312 (337)
T 1pby_B 309 ETLE 312 (337)
T ss_dssp TTCC
T ss_pred cCCc
Confidence 6443
No 154
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=97.34 E-value=0.00016 Score=85.15 Aligned_cols=66 Identities=29% Similarity=0.773 Sum_probs=54.3
Q ss_pred ccccccCCCcceeeccCCceeccCCCcccc-CCCCccCC-CCccccccccCCCceEEEcCCCcEecCCCCCceecc
Q psy948 1325 HCMNITGGSGYLCTCYQGFIIDKNNAKKCL-DVDECATG-IHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKAN 1398 (1576)
Q Consensus 1325 ~c~n~~g~~~~~C~C~~G~~~~~~~~~~c~-d~neC~~~-~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~ 1398 (1576)
.|.+..++ |+|.|++||. ++.|+ +++||... +++|.+.|+|+.|+|+|.|+.||.+..+.. +|.+.
T Consensus 18 ~C~~~~~~--~~C~C~~g~~-----g~~C~~~~~eC~~~~~~~C~~~C~~~~g~~~C~C~~g~~~~~~~~-~C~~~ 85 (317)
T 3h5c_B 18 SCQDSIWG--YTCTCSPGYE-----GSNCELAKNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHK-QCVPH 85 (317)
T ss_dssp CCCCCSSS--CCCCCSSSCC-----SSSSCCCSSSCCTTCTTSCSSEEECCSSSCEEECCTTEECCTTSS-CCEEC
T ss_pred EeECCCCC--eEEECCCCCc-----CCccccCcccCCCCCCCCCcCccccCCCeeEEecccccccccccc-ccccc
Confidence 46666654 9999999996 56787 99999863 479999999999999999999999975443 67754
No 155
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.31 E-value=0.14 Score=61.31 Aligned_cols=106 Identities=14% Similarity=0.023 Sum_probs=67.2
Q ss_pred eeEEecC----CCeEEEEeccCCceEec--ccccCCcceEEEeCCcceEEEecCC--------CcCeEEEEecCCCCcEE
Q psy948 1167 LCALDVR----SIKLDVAELDGTNRKTL--KTAIQDPRGITLHPGIGYVYFSSWN--------LQAYIGKIGMDGSNFTR 1232 (1576)
Q Consensus 1167 ~~avD~~----~~~I~v~~ldG~~r~~l--~~~l~~P~~iavdP~~g~lywtd~g--------~~~~I~ra~mdGs~~~~ 1232 (1576)
+|..|+. .+++.|.++ ...+++ +..-..|. |++.|...+||.+++. ....|...++.-.....
T Consensus 47 vyV~~~~~~~~~~~V~ViD~--~t~~v~~~I~vG~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~ 123 (386)
T 3sjl_D 47 VYVNDPAHFAAVTQQFVIDG--EAGRVIGMIDGGFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTA 123 (386)
T ss_dssp EEEEECGGGCSSEEEEEEET--TTTEEEEEEEECSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEE
T ss_pred EEEEcCcccCCCCEEEEEEC--CCCeEEEEEECCCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEE
Confidence 5666664 445555543 344443 23334585 9999999999998752 12345555554433222
Q ss_pred EEeccC-----CCCCcceEEEeccCCeEEEEcCC-CCeEEEEeCCCCce
Q psy948 1233 ILTHED-----DIAWPNALTLDYFTERLYWADAH-LDYIASVDLDGKHK 1275 (1576)
Q Consensus 1233 iv~~~~-----~l~~P~gLaiD~~~~rlYw~D~~-~~~I~s~~~dG~~r 1275 (1576)
.|.... ....|.++++....++||.+... .+.|..+++.....
T Consensus 124 ~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~v 172 (386)
T 3sjl_D 124 DIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAF 172 (386)
T ss_dssp EEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEE
T ss_pred EEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcE
Confidence 222111 12489999999999999999875 78899988876543
No 156
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.26 E-value=0.002 Score=76.93 Aligned_cols=117 Identities=14% Similarity=0.195 Sum_probs=81.0
Q ss_pred ccceeeecccC---CcEEEEeecc-------cceeEEEeecccccceeeecccceeee-------eccCCcceeeecCCC
Q psy948 1430 RRIEALDIDPV---DEIIYWVDSY-------DRNIRRSFMLEAQKGQVQAGFGQDLGI-------KSIGKLTAIAVDWIA 1492 (1576)
Q Consensus 1430 ~~i~ald~D~~---~~~vYWsD~~-------~~~I~r~~l~~~~~~~v~~~~~~~~~~-------~~~~~p~glAVDwv~ 1492 (1576)
..+.+|++++. +++||+++.. ..+|.|..+++... .+.. ..+++ ...+.+.+|+++. .
T Consensus 66 ~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~-~~~~---~~~i~~~~p~~~~~~h~~~~l~~~p-d 140 (353)
T 2g8s_A 66 GGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLS-KVTD---FRTVFRQMPKLSTGNHFGGRLVFDG-K 140 (353)
T ss_dssp CSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSS-BEEE---EEEEEECSSCCBSSSCCCCCEEECS-S
T ss_pred CCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCC-CCCc---eEEEEEECCCCCCCcccCccEEECC-C
Confidence 45678899986 8899998765 45788887754321 1110 01111 1234578999997 4
Q ss_pred CeEEEeecCCCC-------CCCCCeEEEEEcCCCc------------eEEEeeCCCCCceEEEEecCCCeEEEEecCC
Q psy948 1493 HNIYWTVSDRSG-------SKPKGKVMVAHNDGRY------------RRSLVSENLESPSSIALDPTLGKMFWAETGA 1551 (1576)
Q Consensus 1493 ~nLYWTD~~~~~-------~~~~~~I~v~~ldG~~------------~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~ 1551 (1576)
++||++...+.. ....++|.+.+.+|+. +..++..++..|.+|++||..|.||.+|.|.
T Consensus 141 G~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~ 218 (353)
T 2g8s_A 141 GYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGP 218 (353)
T ss_dssp SEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECS
T ss_pred CcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCC
Confidence 599999754211 1234789999999972 3345667999999999999999999999874
No 157
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.25 E-value=0.0027 Score=78.34 Aligned_cols=121 Identities=19% Similarity=0.324 Sum_probs=82.0
Q ss_pred cccceeeecccC---CcEEEEeecc------------cceeEEEeecccccceeeeccc--ceeeeeccCCcceeeecCC
Q psy948 1429 ERRIEALDIDPV---DEIIYWVDSY------------DRNIRRSFMLEAQKGQVQAGFG--QDLGIKSIGKLTAIAVDWI 1491 (1576)
Q Consensus 1429 ~~~i~ald~D~~---~~~vYWsD~~------------~~~I~r~~l~~~~~~~v~~~~~--~~~~~~~~~~p~glAVDwv 1491 (1576)
...+.+|++++. ++.||+++.. ...|+|..++.... .+..... ..+.....+.+.+|+++.
T Consensus 76 ~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~-~~~~~~~i~~~~p~~~~H~~~~l~f~p- 153 (454)
T 1cru_A 76 QNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTD-TLEKPVDLLAGLPSSKDHQSGRLVIGP- 153 (454)
T ss_dssp SCSEEEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTT-EEEEEEEEEEEECCCSSCCEEEEEECT-
T ss_pred CCceeEEEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCC-CcCCcEEEEEcCCCCCCCCCCeEeECC-
Confidence 345568999987 8999998864 45788887754221 1100000 001112346689999997
Q ss_pred CCeEEEeecCCCC--------------------------CCCCCeEEEEEcCCCc----------eEEEeeCCCCCceEE
Q psy948 1492 AHNIYWTVSDRSG--------------------------SKPKGKVMVAHNDGRY----------RRSLVSENLESPSSI 1535 (1576)
Q Consensus 1492 ~~nLYWTD~~~~~--------------------------~~~~~~I~v~~ldG~~----------~~~lv~~~l~~P~~I 1535 (1576)
.++||++-.++.. ....++|.+.+.||+. +..|+..++.+|.+|
T Consensus 154 DG~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~RNp~gl 233 (454)
T 1cru_A 154 DQKIYYTIGDQGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHRNPQGL 233 (454)
T ss_dssp TSCEEEEECCTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCCSEEEEE
T ss_pred CCeEEEEECCCCCCCccccccccccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECCCCcceE
Confidence 5689999543211 1135889999999983 345667899999999
Q ss_pred EEecCCCeEEEEecCCC
Q psy948 1536 ALDPTLGKMFWAETGAS 1552 (1576)
Q Consensus 1536 avDp~~G~LYWTD~g~~ 1552 (1576)
|+|| .|.||.+|.|..
T Consensus 234 a~dp-~G~L~~~d~g~~ 249 (454)
T 1cru_A 234 AFTP-NGKLLQSEQGPN 249 (454)
T ss_dssp EECT-TSCEEEEEECSS
T ss_pred EECC-CCCEEEEecCCC
Confidence 9999 699999998754
No 158
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.22 E-value=0.28 Score=58.57 Aligned_cols=113 Identities=8% Similarity=-0.033 Sum_probs=68.0
Q ss_pred CCcceEEEeCCcceEEEecCC--------CcCeEEEEecCC-CCcEEEEec-cC---CCCCcceEEEeccCCeEEEEcCC
Q psy948 1195 QDPRGITLHPGIGYVYFSSWN--------LQAYIGKIGMDG-SNFTRILTH-ED---DIAWPNALTLDYFTERLYWADAH 1261 (1576)
Q Consensus 1195 ~~P~~iavdP~~g~lywtd~g--------~~~~I~ra~mdG-s~~~~iv~~-~~---~l~~P~gLaiD~~~~rlYw~D~~ 1261 (1576)
..| +|++.|...+||.+... ....|...+..- .-..+|... .. ...+|.+++++...++||.+...
T Consensus 67 ~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~ 145 (373)
T 2mad_H 67 FLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFA 145 (373)
T ss_pred CCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecC
Confidence 458 99999999999999742 124566665542 211222211 00 02579999999999999999875
Q ss_pred -CCeEEEEeCCCCceEEE-EeCCCccceeEEeeeCCeEEEeccCCCcceeecc
Q psy948 1262 -LDYIASVDLDGKHKHIV-ISGQKVPHVFALTLFEDHIYWTDWNTKSINRADK 1312 (1576)
Q Consensus 1262 -~~~I~s~~~dG~~r~~v-~~~~~~~~P~~lavfed~lYwtd~~~~~i~~~~k 1312 (1576)
.+.|..++ ........ + .++....+.-.....|++.+..+.+..++.
T Consensus 146 ~~~~v~viD-~t~~~~~~~i---~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~ 194 (373)
T 2mad_H 146 AGPAVGLVV-QGGSSDDQLL---SSPTCYHIHPGAPSTFYLLCAQGGLAKTDH 194 (373)
T ss_pred CCCeEEEEE-CCCCEEeEEc---CCCceEEEEeCCCceEEEEcCCCCEEEEEC
Confidence 68899988 54332211 1 122122222334566777666666666655
No 159
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.20 E-value=0.063 Score=63.60 Aligned_cols=109 Identities=12% Similarity=0.130 Sum_probs=68.8
Q ss_pred cc-cCCcceEEEeCCcceEEEec--CC---------CcCeEEEEecCCC--CcEEEEecc----CCCCCcceEEEecc--
Q psy948 1192 TA-IQDPRGITLHPGIGYVYFSS--WN---------LQAYIGKIGMDGS--NFTRILTHE----DDIAWPNALTLDYF-- 1251 (1576)
Q Consensus 1192 ~~-l~~P~~iavdP~~g~lywtd--~g---------~~~~I~ra~mdGs--~~~~iv~~~----~~l~~P~gLaiD~~-- 1251 (1576)
.+ ...|-.|+++| .|.+|-+- |- ...+|.+..++.. ..+++.... ..-..|.||.+...
T Consensus 46 ~~~~~G~EDi~~~~-~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~d 124 (355)
T 3sre_A 46 KGIDNGSEDLEILP-NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDD 124 (355)
T ss_dssp TTCCSCCCEEEECT-TSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTT
T ss_pred CCCCCCcceeEEcC-CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCC
Confidence 44 35799999998 79999884 22 3457999888743 223332211 12369999999763
Q ss_pred -CCeEEEEcCC--CCeEEEEeCCCC-ceEEEE---eCCCccceeEEeeeC-CeEEEec
Q psy948 1252 -TERLYWADAH--LDYIASVDLDGK-HKHIVI---SGQKVPHVFALTLFE-DHIYWTD 1301 (1576)
Q Consensus 1252 -~~rlYw~D~~--~~~I~s~~~dG~-~r~~v~---~~~~~~~P~~lavfe-d~lYwtd 1301 (1576)
+.+||.++.. ..+|+...++-. ...+++ .+..+..|-.+++.. +.+|.++
T Consensus 125 g~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~ 182 (355)
T 3sre_A 125 NTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATN 182 (355)
T ss_dssp CCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEE
T ss_pred CcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecC
Confidence 3589999998 567777666543 223333 344567777777754 5666654
No 160
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.19 E-value=0.032 Score=62.80 Aligned_cols=71 Identities=15% Similarity=0.145 Sum_probs=51.8
Q ss_pred ceEEEeccCCeEEEEcCCC--CeEEEEeCCCCceEEEEeCCCccceeE--EeeeCCeEEEeccCCCcceeecccccccc
Q psy948 1244 NALTLDYFTERLYWADAHL--DYIASVDLDGKHKHIVISGQKVPHVFA--LTLFEDHIYWTDWNTKSINRADKFNAREI 1318 (1576)
Q Consensus 1244 ~gLaiD~~~~rlYw~D~~~--~~I~s~~~dG~~r~~v~~~~~~~~P~~--lavfed~lYwtd~~~~~i~~~~k~~~~~~ 1318 (1576)
.||+++ +++||.+.... ..|..+++.......-+.- -..+|+ |++.++.||.++|..+.++.++.-+.+.+
T Consensus 46 qGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l--~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~ 120 (262)
T 3nol_A 46 EGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQIEL--GKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQV 120 (262)
T ss_dssp EEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEEEC--CTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEE
T ss_pred ceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEEec--CCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEE
Confidence 788887 67999998765 4888888875443222221 235555 89999999999999999998887665543
No 161
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.18 E-value=0.22 Score=59.84 Aligned_cols=118 Identities=14% Similarity=0.081 Sum_probs=80.0
Q ss_pred cccceeeecccCCcEEEEeec-------ccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecC
Q psy948 1429 ERRIEALDIDPVDEIIYWVDS-------YDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSD 1501 (1576)
Q Consensus 1429 ~~~i~ald~D~~~~~vYWsD~-------~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~ 1501 (1576)
...+.++++++..+.||.+.. ..+.|+..++... ++.. .+.....|.++++++..+.||.+...
T Consensus 253 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~---~~~~------~~~~~~~~~~~~~~~~g~~l~~~~~~ 323 (433)
T 3bws_A 253 IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKE---KLID------TIGPPGNKRHIVSGNTENKIYVSDMC 323 (433)
T ss_dssp CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTT---EEEE------EEEEEECEEEEEECSSTTEEEEEETT
T ss_pred CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCC---cEEe------eccCCCCcceEEECCCCCEEEEEecC
Confidence 345788899998888887765 3456666655432 1111 01112368899999888899999764
Q ss_pred CCCCCCCCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEecCCC-------------CcEEEeecCC
Q psy948 1502 RSGSKPKGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAETGAS-------------PRIESAWMDG 1562 (1576)
Q Consensus 1502 ~~~~~~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~~-------------~~Iera~mDG 1562 (1576)
.++|.+.++++......+. ....|.+|++.|...+||.+..+.. ..|...++..
T Consensus 324 ------~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~ 390 (433)
T 3bws_A 324 ------CSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT 390 (433)
T ss_dssp ------TTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTT
T ss_pred ------CCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCC
Confidence 5789999998654443443 4567899999999888998876432 2677776643
No 162
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.17 E-value=0.05 Score=64.60 Aligned_cols=119 Identities=15% Similarity=0.098 Sum_probs=83.4
Q ss_pred cccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCCC
Q psy948 1429 ERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPK 1508 (1576)
Q Consensus 1429 ~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~ 1508 (1576)
...+.+++|.+..+.||.+....+.|+..++.... ... .+.....|.++++.+..+.||.+... .
T Consensus 115 ~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~---~~~------~~~~~~~~~~~~~~~dg~~l~~~~~~------~ 179 (391)
T 1l0q_A 115 GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKA---VIN------TVSVGRSPKGIAVTPDGTKVYVANFD------S 179 (391)
T ss_dssp SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE---EEE------EEECCSSEEEEEECTTSSEEEEEETT------T
T ss_pred CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCc---EEE------EEecCCCcceEEECCCCCEEEEEeCC------C
Confidence 34577889999888999998888888876654322 111 12223567899999988899988764 4
Q ss_pred CeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEecC-CCCcEEEeecCCC
Q psy948 1509 GKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAETG-ASPRIESAWMDGS 1563 (1576)
Q Consensus 1509 ~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g-~~~~Iera~mDGs 1563 (1576)
++|.+.++........+. ....|.+|++.|...+||.+..+ ....|...++...
T Consensus 180 ~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~ 234 (391)
T 1l0q_A 180 MSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN 234 (391)
T ss_dssp TEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT
T ss_pred CEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCC
Confidence 789999987665444443 34578999999988888888752 2346666666543
No 163
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.16 E-value=0.018 Score=66.88 Aligned_cols=250 Identities=10% Similarity=0.084 Sum_probs=140.3
Q ss_pred CCCCCcceEEEeccCCeEEEEcCCCCeEEEEeCCCCceEEEE-e-----CCCccceeEEee----eCCeEEEe-cc----
Q psy948 1238 DDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVI-S-----GQKVPHVFALTL----FEDHIYWT-DW---- 1302 (1576)
Q Consensus 1238 ~~l~~P~gLaiD~~~~rlYw~D~~~~~I~s~~~dG~~r~~v~-~-----~~~~~~P~~lav----fed~lYwt-d~---- 1302 (1576)
..-.+|.+++-|...+++|+.+.....|..++.++.....+. . +....+|.||.+ ..+.|+.. +.
T Consensus 10 ~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af 89 (334)
T 2p9w_A 10 VKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSF 89 (334)
T ss_dssp CTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTT
T ss_pred CcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccc
Confidence 355789999999999999999999999999999865544442 1 223457899999 45667663 21
Q ss_pred --------CCCcceeeccc---cccccccceecccccccCCCcceeeccCCceeccCCCccccCCCCccCCCCccccccc
Q psy948 1303 --------NTKSINRADKF---NAREIQAGILHHCMNITGGSGYLCTCYQGFIIDKNNAKKCLDVDECATGIHHCSQVCT 1371 (1576)
Q Consensus 1303 --------~~~~i~~~~k~---~~~~~~~~~~~~c~n~~g~~~~~C~C~~G~~~~~~~~~~c~d~neC~~~~~~Cs~lC~ 1371 (1576)
....|.+.+.- +++.... .++... ..+|...
T Consensus 90 ~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~------~dL~~~-------~~~~~~~------------------------- 131 (334)
T 2p9w_A 90 NFADQSSHGASSFHSFNLPLSENSKPVWS------VNFEKV-------QDEFEKK------------------------- 131 (334)
T ss_dssp CTTSCCSSSCCEEEEEESSCCTTCCCSEE------EESHHH-------HHHHHHH-------------------------
T ss_pred cccccccCCCCEEEEEcCCcCCCCCEEEE------ecCccc-------ccccccc-------------------------
Confidence 01222222222 1111100 000000 0000000
Q ss_pred cCCCceEEEcCCCcEecCCCCCceeccCCceEEEEecC-Cceeeecccccccccccc------ccccceeeecccCCcEE
Q psy948 1372 NLNGTYACSCNAGFTLSDGLSGVCKANDNKLTIVYSNG-PEIRAYETHKRRFRDVIS------DERRIEALDIDPVDEII 1444 (1576)
Q Consensus 1372 n~~gsy~C~Cp~G~~l~d~~~~~C~~~~~~~~ll~s~~-~~Ir~i~~~~~~~~~~v~------~~~~i~ald~D~~~~~v 1444 (1576)
+ +..| .-+.... .+.....|+..+-. ..|.++..++........ ....+.+|+|.+....|
T Consensus 132 ~-g~~~--~~~nDva---------vD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~L 199 (334)
T 2p9w_A 132 A-GKRP--FGVVQSA---------QDRDGNSYVAFALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKL 199 (334)
T ss_dssp H-SSCC--EEEEEEE---------ECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEE
T ss_pred c-cccc--cCCceeE---------ECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEE
Confidence 0 0000 0000111 12233456666656 667777766553222211 12236799999999999
Q ss_pred EEeecccceeEEEeecccccceeeec-ccceeeeeccCCccee-eecCCCCeEEEeecCCCCCCCCCeEEEEEcCCCceE
Q psy948 1445 YWVDSYDRNIRRSFMLEAQKGQVQAG-FGQDLGIKSIGKLTAI-AVDWIAHNIYWTVSDRSGSKPKGKVMVAHNDGRYRR 1522 (1576)
Q Consensus 1445 YWsD~~~~~I~r~~l~~~~~~~v~~~-~~~~~~~~~~~~p~gl-AVDwv~~nLYWTD~~~~~~~~~~~I~v~~ldG~~~~ 1522 (1576)
+.++. .+.|++.++.......+... .+. ...+..|.|| +++.-+.-||.++.. .+++.+...|| ++.
T Consensus 200 iv~~~-~g~L~~fD~~~pv~~~v~~~~~G~---~~~~~~~dgilp~~~~G~vllV~~~~------~~~~~l~S~Dg-W~s 268 (334)
T 2p9w_A 200 IAFGG-PRALTAFDVSKPYAWPEPVKINGD---FGTLSGTEKIVTVPVGNESVLVGARA------PYAISFRSWDN-WKS 268 (334)
T ss_dssp EEESS-SSSEEEEECSSSSCCCEECEESSC---CCCCTTEEEEEEEEETTEEEEEEEET------TEEEEEECSST-TSE
T ss_pred EEEcC-CCeEEEEcCCCCcceeecccccCC---cccccCcccccccccCCEEEEEEcCC------CCEEEEECCCC-cce
Confidence 99988 99999988773211001100 000 0124578884 888666666999874 46777888888 554
Q ss_pred EEee----CCCCCceEEEEe-----cCCCeEEEEec
Q psy948 1523 SLVS----ENLESPSSIALD-----PTLGKMFWAET 1549 (1576)
Q Consensus 1523 ~lv~----~~l~~P~~IavD-----p~~G~LYWTD~ 1549 (1576)
.-+. ..+. +++++++ ...+.||-.+.
T Consensus 269 a~~~g~~~~~~~-~~g~tt~t~~~~~~~~~iYvv~~ 303 (334)
T 2p9w_A 269 ANIKKTKRSELQ-NSGFTAVADYYQGSEQGLYAVSA 303 (334)
T ss_dssp EEEEEEECGGGG-SSCEEEEEEEEETTEEEEEEEEC
T ss_pred eEEeeeecCccc-cCceeEEEEeccccCCeEEEEee
Confidence 3322 2233 7888888 56789998884
No 164
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=97.15 E-value=0.00025 Score=66.43 Aligned_cols=37 Identities=32% Similarity=0.794 Sum_probs=30.9
Q ss_pred ccCccccccCCCcccccceeCCCeeeeec--CCCcccCCCCc
Q psy948 1075 CNVDECAKVETNQCGHKCVDTLTGYYCEC--NTGYNDDDIGT 1114 (1576)
Q Consensus 1075 cdidEC~~~~~~~Csq~C~Nt~Gsy~C~C--~~Gy~l~~~~~ 1114 (1576)
-+||||+. ++|.+.|+|++|+|+|.| .+||.+..++.
T Consensus 43 ~dideC~~---~~C~~~C~n~~g~y~C~C~g~~G~~~~~~~~ 81 (87)
T 1z6c_A 43 EDIDECSE---NMCAQLCVNYPGGYTCYCDGKKGFKLAQDQK 81 (87)
T ss_dssp ECCCHHHH---SCCSSEECCCSSSCCEECCSSSCCBCCTTSS
T ss_pred CCcCeeCC---CCCCCEEEccCCCEEEECCCCcCCcccCCCC
Confidence 36999974 689999999999999999 68888765543
No 165
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.14 E-value=0.0032 Score=74.46 Aligned_cols=132 Identities=15% Similarity=0.128 Sum_probs=89.5
Q ss_pred ccccccccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCC---CCeEEEeec
Q psy948 1424 DVISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWI---AHNIYWTVS 1500 (1576)
Q Consensus 1424 ~~v~~~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv---~~nLYWTD~ 1500 (1576)
.+...+..+.+|+|.+. ++||.+....++|+++...+.....+ ... ..+...+.+.+.|||+++- ++.||.+.+
T Consensus 26 ~va~gL~~P~~ia~~pd-G~llVter~~G~I~~v~~~~g~~~~v-~~~-~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt 102 (347)
T 3das_A 26 TVATGLNSPWGLAPLPG-GDLLVSSRDEATITRVDAKTGRKTEL-GEV-PGVSPSGEGGLLGIALSPDYASDHMVYAYFT 102 (347)
T ss_dssp EEECCCSSEEEEEECTT-SCEEEEETTTCEEEEECTTTCCEEEE-EEC-TTCCCBTTBSEEEEEECTTHHHHCEEEEEEE
T ss_pred EeecCCCCceEEEEcCC-CcEEEEEecCCEEEEEECCCCcEeee-ccc-CceeecCCCCceeeEeccccccCCEEEEEEe
Confidence 34456778999999875 57999988789998875433221111 111 1122345678999999984 788998754
Q ss_pred CCCCCCCCCeEEEEEcCCC--------ceEEEee----CCCCCceEEEEecCCCeEEEEec--C----------CCCcEE
Q psy948 1501 DRSGSKPKGKVMVAHNDGR--------YRRSLVS----ENLESPSSIALDPTLGKMFWAET--G----------ASPRIE 1556 (1576)
Q Consensus 1501 ~~~~~~~~~~I~v~~ldG~--------~~~~lv~----~~l~~P~~IavDp~~G~LYWTD~--g----------~~~~Ie 1556 (1576)
.. ..++|.+..+++. ..++|+. .....+..|+++| .|+||++.. + ...+|.
T Consensus 103 ~~----~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgp-DG~Lyvt~Gd~~~~~~~qd~~~~~G~Il 177 (347)
T 3das_A 103 SA----SDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGP-DKMLYAGTGESGDTGLSQDRKSLGGKIL 177 (347)
T ss_dssp CS----SSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECT-TSCEEEECBCTTCGGGTTCTTCSTTCEE
T ss_pred cC----CCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCC-CCCEEEEECCCCCCccccCCCCCCCEEE
Confidence 31 1468888888762 2455553 2345667899998 589999953 1 246999
Q ss_pred EeecCCC
Q psy948 1557 SAWMDGS 1563 (1576)
Q Consensus 1557 ra~mDGs 1563 (1576)
|.+.||+
T Consensus 178 Ri~~dG~ 184 (347)
T 3das_A 178 RMTPDGE 184 (347)
T ss_dssp EECTTSS
T ss_pred EEeCCCC
Confidence 9999998
No 166
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=97.11 E-value=0.00017 Score=71.80 Aligned_cols=67 Identities=28% Similarity=0.740 Sum_probs=49.0
Q ss_pred ecccccc-cCCCcceeeccCCceeccCCCccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceecc
Q psy948 1323 LHHCMNI-TGGSGYLCTCYQGFIIDKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKAN 1398 (1576)
Q Consensus 1323 ~~~c~n~-~g~~~~~C~C~~G~~~~~~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~ 1398 (1576)
.+.|.++ .++ |+|+|++||.+.......|.+ +|. +++|.+.|++ .++|+|.|++||+|..+. .|+++
T Consensus 13 ~~~C~~~~~g~--y~C~C~~Gy~g~~~~~~~C~~--~C~--~~~C~~~C~~-~~~y~C~C~~Gy~~~~g~--~C~di 80 (118)
T 1dx5_I 13 EYQCQPLDQTS--YLCVCAEGFAPIPHEPHRCQM--FCN--QTACPADCDP-NTQASCECPEGYILDDGF--ICTDI 80 (118)
T ss_dssp SSEEEECSSSC--EEEECCTTEEEETTEEEEEEE--CCC--SSEEECEECT-TSTTCEECCTTEEEETTT--EEEEC
T ss_pred CCCCCCCCCCC--EEeECCCCccccCCCCCcccc--ccC--CCCCCCcccC-CCCeEeECCCCccCCCCC--ccccc
Confidence 3578888 765 999999999986432223332 343 6788899998 589999999999987633 57644
No 167
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=97.11 E-value=0.0003 Score=72.46 Aligned_cols=56 Identities=34% Similarity=0.761 Sum_probs=44.9
Q ss_pred ceeeccCCceecc----CCCccccCCCCccCCC-Cccc--cccccCCCceEEEcCCCcEecCC
Q psy948 1335 YLCTCYQGFIIDK----NNAKKCLDVDECATGI-HHCS--QVCTNLNGTYACSCNAGFTLSDG 1390 (1576)
Q Consensus 1335 ~~C~C~~G~~~~~----~~~~~c~d~neC~~~~-~~Cs--~lC~n~~gsy~C~Cp~G~~l~d~ 1390 (1576)
|+|.|++||.... .....|++++||+..+ .+|. +.|++++++|+|.|++||++...
T Consensus 19 ~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~ 81 (143)
T 2bou_A 19 TACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSG 81 (143)
T ss_dssp SCEEECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTC
T ss_pred CEEeCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcC
Confidence 8999999998642 2346899999999754 3785 79999999999999999999643
No 168
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.10 E-value=0.0038 Score=76.97 Aligned_cols=201 Identities=13% Similarity=0.153 Sum_probs=96.2
Q ss_pred CCeEEEEeccCC--------------------ceEecccccCCcceEEEeCCcc------eEEEecC-CCc---CeEEEE
Q psy948 1174 SIKLDVAELDGT--------------------NRKTLKTAIQDPRGITLHPGIG------YVYFSSW-NLQ---AYIGKI 1223 (1576)
Q Consensus 1174 ~~~I~v~~ldG~--------------------~r~~l~~~l~~P~~iavdP~~g------~lywtd~-g~~---~~I~ra 1223 (1576)
.++|...+.||. ...+...++.+|.+|++||..| +||-+|. |.. ..|.++
T Consensus 176 ~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~~~G~l~~~~~D~~G~~~~~~ei~~i 255 (463)
T 2wg3_C 176 TGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTILCSDSNGKNRSSARILQI 255 (463)
T ss_dssp TTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSSTTCSEEEEEECC------CEEEEEE
T ss_pred CeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCCcccceEEEecccCCCCCCCCeEeee
Confidence 466777777773 2234567899999999999864 7787886 432 234443
Q ss_pred ecCCCC---cEEEEeccCC-CCCcceEEEec------cCCeEEEEcCCCCeEEEEeCCCCc---eEEEE-eC-------C
Q psy948 1224 GMDGSN---FTRILTHEDD-IAWPNALTLDY------FTERLYWADAHLDYIASVDLDGKH---KHIVI-SG-------Q 1282 (1576)
Q Consensus 1224 ~mdGs~---~~~iv~~~~~-l~~P~gLaiD~------~~~rlYw~D~~~~~I~s~~~dG~~---r~~v~-~~-------~ 1282 (1576)
. .|.+ ...++.-... -..|.|+++-. ..+.+|+++.. .+|..+.+++.. ....+ .+ .
T Consensus 256 ~-~G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f~~~~~-g~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 333 (463)
T 2wg3_C 256 I-KGKDYESEPSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYVFGDRN-GNFLTLQQSPVTKQWQEKPLCLGTSGSCRGY 333 (463)
T ss_dssp C-----CCSCCCCEECCC----CEEEEEECCCSSCTTTTTCEEEEETT-SCEEEEEC-----CCEEEEECEEETTSSCSC
T ss_pred c-cCCCCCCCCCeEEeeCCCCccccceEEEeCCCChhhcceEEEecCC-CcEEEEEeCCCCceeeEEEeecCCccccccc
Confidence 1 2221 1122221111 14678888842 23568888887 678888887542 22222 11 2
Q ss_pred CccceeEEeee-CCeEEEecc-------CCCcceeeccccccccc----c----------ceecccccccCCCcceeecc
Q psy948 1283 KVPHVFALTLF-EDHIYWTDW-------NTKSINRADKFNAREIQ----A----------GILHHCMNITGGSGYLCTCY 1340 (1576)
Q Consensus 1283 ~~~~P~~lavf-ed~lYwtd~-------~~~~i~~~~k~~~~~~~----~----------~~~~~c~n~~g~~~~~C~C~ 1340 (1576)
...+|.+|++- .+.||++++ ....|+|+..-...... . .+...|.|-.=...++|.|+
T Consensus 334 ~~~r~~~v~~~pdG~Lyv~~~~~~~~~~~~G~I~Ri~~p~~~~~p~~C~~~~~g~~c~~~~C~~~C~nG~C~~~~~C~C~ 413 (463)
T 2wg3_C 334 FSGHILGFGEDELGEVYILSSSKSMTQTHNGKLYKIVDPKRPLMPEECRATVQPAQTLTSECSRLCRNGYCTPTGKCCCS 413 (463)
T ss_dssp CCSEEEEEEECTTCCEEEEEESSCGGGCSSEEEEEEECTTSCSSCGGGCCCCCCCCCCCCHHHHHCCSEEECTTSCEEEC
T ss_pred ccCcceEEEECCCCCEEEEeccCCcccCCCCcEEEecCcccccccccCCCCCcCCCCccccccCCCCCCccCCCCeECCC
Confidence 24578888886 468999998 46788887621111000 0 01112332000012689999
Q ss_pred CCceeccCCCccccCCCCccCCCCccc--cccccCCCceEEEcCCCcEec
Q psy948 1341 QGFIIDKNNAKKCLDVDECATGIHHCS--QVCTNLNGTYACSCNAGFTLS 1388 (1576)
Q Consensus 1341 ~G~~~~~~~~~~c~d~neC~~~~~~Cs--~lC~n~~gsy~C~Cp~G~~l~ 1388 (1576)
+||.. ..|. +++|.. .|+ ..|++. ++|.|++||++.
T Consensus 414 ~G~~G-----~~C~-~~~C~~---~C~~~g~C~~~---~~C~C~~G~~G~ 451 (463)
T 2wg3_C 414 PGWEG-----DFCR-TAKCEP---ACRHGGVCVRP---NKCLCKKGYLGP 451 (463)
T ss_dssp TTEES-----TTSC-EECC-------------------------------
T ss_pred CCcCC-----CcCC-cCcCCC---CCCCCCEECCC---CEEECCCCcccC
Confidence 99974 4563 456753 564 367754 799999999874
No 169
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.09 E-value=0.055 Score=64.75 Aligned_cols=283 Identities=13% Similarity=0.046 Sum_probs=142.4
Q ss_pred EeCCcceEEEecCCC---cCeEEEEecCCCCcEEEEeccCCCCCcceEEEeccCCeEEEEcC---------CCCeEEEEe
Q psy948 1202 LHPGIGYVYFSSWNL---QAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADA---------HLDYIASVD 1269 (1576)
Q Consensus 1202 vdP~~g~lywtd~g~---~~~I~ra~mdGs~~~~iv~~~~~l~~P~gLaiD~~~~rlYw~D~---------~~~~I~s~~ 1269 (1576)
..|....+|.++++. ...+...+ ....+.+-.... -..| +|++....++||.++. ..+.|..++
T Consensus 40 ~~pd~~~vyV~~~~~~~~~~~V~ViD--~~t~~v~~~I~v-G~~P-~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD 115 (386)
T 3sjl_D 40 PAPDARRVYVNDPAHFAAVTQQFVID--GEAGRVIGMIDG-GFLP-NPVVADDGSFIAHASTVFSRIARGERTDYVEVFD 115 (386)
T ss_dssp CCCCTTEEEEEECGGGCSSEEEEEEE--TTTTEEEEEEEE-CSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred cCCCCCEEEEEcCcccCCCCEEEEEE--CCCCeEEEEEEC-CCCC-cEEECCCCCEEEEEcccccccccCCCCCEEEEEE
Confidence 356777889888862 23555544 444443332222 2347 5999999999999984 356788888
Q ss_pred CCCCceE-EEEeCC-----CccceeEEee--eCCeEEEeccC-CCcceeeccccccccccceecccccccCCCcceeecc
Q psy948 1270 LDGKHKH-IVISGQ-----KVPHVFALTL--FEDHIYWTDWN-TKSINRADKFNAREIQAGILHHCMNITGGSGYLCTCY 1340 (1576)
Q Consensus 1270 ~dG~~r~-~v~~~~-----~~~~P~~lav--fed~lYwtd~~-~~~i~~~~k~~~~~~~~~~~~~c~n~~g~~~~~C~C~ 1340 (1576)
....... .+.-+. ...+|+++++ .+.++|.++.. .++|..++.-+++.+...- +++ |
T Consensus 116 ~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~------v~g-----~--- 181 (386)
T 3sjl_D 116 PVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLD------VPD-----C--- 181 (386)
T ss_dssp TTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEE------CCS-----E---
T ss_pred CCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEE------CCC-----c---
Confidence 7765432 222221 1236766665 57799999864 6777777766554332110 000 0
Q ss_pred CCceeccCCCccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceeccCCceEEEEecC-Cceeeecccc
Q psy948 1341 QGFIIDKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKANDNKLTIVYSNG-PEIRAYETHK 1419 (1576)
Q Consensus 1341 ~G~~~~~~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~~~~~~ll~s~~-~~Ir~i~~~~ 1419 (1576)
.+ +.+ .....|.-.|++|-.+ ++.... ..+.. ...
T Consensus 182 ~~--~~P------------------------~g~~~~~~~~~DG~~~----------------~v~~~~~g~v~~--~~~ 217 (386)
T 3sjl_D 182 YH--IFP------------------------TAPDTFFMHCRDGSLA----------------KVAFGTEGTPEI--THT 217 (386)
T ss_dssp EE--EEE------------------------EETTEEEEEETTSCEE----------------EEECCSSSCCEE--EEC
T ss_pred ce--eec------------------------CCCceeEEECCCCCEE----------------EEECCCCCeEEE--eec
Confidence 00 000 0011233344444322 111111 11100 000
Q ss_pred ccccccccccccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccc--eeeeeccCCc---ceeeecCCCCe
Q psy948 1420 RRFRDVISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQ--DLGIKSIGKL---TAIAVDWIAHN 1494 (1576)
Q Consensus 1420 ~~~~~~v~~~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~--~~~~~~~~~p---~glAVDwv~~n 1494 (1576)
.++.+ ..........|+...+++||+.. .++++-+++.+... ++...... ...+...-.| ..+||+.-.+.
T Consensus 218 -~~~~~-~~~~~~~~~~~~~~dG~~~~vs~-~g~V~v~d~~~~~~-~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~ 293 (386)
T 3sjl_D 218 -EVFHP-EDEFLINHPAYSQKAGRLVWPTY-TGKIHQIDLSSGDA-KFLPAVEALTEAERADGWRPGGWQQVAYHRALDR 293 (386)
T ss_dssp -CCCSC-TTSCBCSCCEEETTTTEEEEEBT-TSEEEEEECTTSSC-EECCCEESSCHHHHHTTEEECSSSCEEEETTTTE
T ss_pred -ceecc-ccccccccceeEcCCCcEEEEeC-CCEEEEEECCCCcc-eeecceeccccccccccccCCCcceeeECCCCCe
Confidence 00000 00011112355666778877654 46777776654321 11111100 0000001123 34899999999
Q ss_pred EEEeecCCC---CCCCCCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCC-eEEEEecCC
Q psy948 1495 IYWTVSDRS---GSKPKGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLG-KMFWAETGA 1551 (1576)
Q Consensus 1495 LYWTD~~~~---~~~~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G-~LYWTD~g~ 1551 (1576)
||.+...+. +....++|.|.++.......-+..+ ..|.+|+|.|... +||-+.++.
T Consensus 294 lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg-~~~~~lavs~D~~~~ly~tn~~~ 353 (386)
T 3sjl_D 294 IYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDEKPLLYALSTGD 353 (386)
T ss_dssp EEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECSSSSCEEEEEETTT
T ss_pred EEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC-CCcceEEECCCCCeEEEEEcCCC
Confidence 999864210 1111367889888665433222211 3678999999876 778778754
No 170
>3ojy_A Complement component C8 alpha chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=97.08 E-value=0.00056 Score=85.64 Aligned_cols=35 Identities=43% Similarity=0.941 Sum_probs=32.3
Q ss_pred CeeecC-CCceecceeeeCCCCCCCCCCCCCCCCCC
Q psy948 868 GTFQCS-SGHCIAAYFRCDGDRDCRDLSDEMNCPPR 902 (1576)
Q Consensus 868 ~~f~C~-~g~Ci~~~~~Cdg~~dC~d~sDE~~C~~~ 902 (1576)
++|+|. +|+||+..|+|||+.||.|+|||.+|...
T Consensus 68 ~~f~C~~~g~Ci~~~~~Cdg~~dC~d~sDE~~C~~~ 103 (554)
T 3ojy_A 68 QDFQCKETGRCLKRHLVCNGDQDCLDGSDEDDCEDV 103 (554)
T ss_dssp SSEECSSSCCEECGGGTTSSSCCSSSCTTSSSCCSC
T ss_pred CcCccCCCCEEcccccccCCcccCCCccccccCCCC
Confidence 479999 99999999999999999999999999753
No 171
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.08 E-value=0.09 Score=62.74 Aligned_cols=136 Identities=8% Similarity=-0.171 Sum_probs=75.2
Q ss_pred eeEEecCCC----eEEEEeccCCceEec--ccccCCcceEEEeCCcceEEEecCC-------C-cCeEEEEecCCCCcEE
Q psy948 1167 LCALDVRSI----KLDVAELDGTNRKTL--KTAIQDPRGITLHPGIGYVYFSSWN-------L-QAYIGKIGMDGSNFTR 1232 (1576)
Q Consensus 1167 ~~avD~~~~----~I~v~~ldG~~r~~l--~~~l~~P~~iavdP~~g~lywtd~g-------~-~~~I~ra~mdGs~~~~ 1232 (1576)
+|..+.... ++.|.+ ....+++ +..-..| +|++.|..++||.+.++ . ...|...++.-.....
T Consensus 34 ~yV~~~~~~~~~d~vsvID--~~t~~v~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~ 110 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSC--AGCGVTLGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIA 110 (368)
T ss_dssp EEEEECTTTCSSEEEEEEE--TTTTEEEEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEE
T ss_pred EEEECCccCCccceEEEEE--CCCCeEEEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEE
Confidence 344454443 444443 3333443 2222468 99999999999999752 2 3456666654333222
Q ss_pred EEeccC-----CCCCcceEEEeccCCeEEEEcCC-CCeEEE--EeCCCCceEEEEeCCCccceeEEeeeCCeEEEeccCC
Q psy948 1233 ILTHED-----DIAWPNALTLDYFTERLYWADAH-LDYIAS--VDLDGKHKHIVISGQKVPHVFALTLFEDHIYWTDWNT 1304 (1576)
Q Consensus 1233 iv~~~~-----~l~~P~gLaiD~~~~rlYw~D~~-~~~I~s--~~~dG~~r~~v~~~~~~~~P~~lavfed~lYwtd~~~ 1304 (1576)
-+.... ....|.+|+++...++||.+... .+.|.. ++... .+.+.. +..+.+.--....|.+....
T Consensus 111 ~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t--v~~i~v----~~~~~~~p~g~~~~~~~~~d 184 (368)
T 1mda_H 111 DIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD--DQLTKS----ASCFHIHPGAAATHYLGSCP 184 (368)
T ss_dssp EEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE--EEEEEC----SSCCCCEEEETTEEECCCCT
T ss_pred EEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh--ceEEEC----CCceEEccCCCeEEEEEcCC
Confidence 222110 13579999999999999999865 566666 44443 233221 11122222344556555555
Q ss_pred Ccceeec
Q psy948 1305 KSINRAD 1311 (1576)
Q Consensus 1305 ~~i~~~~ 1311 (1576)
+.+..++
T Consensus 185 g~~~~vd 191 (368)
T 1mda_H 185 ASLAASD 191 (368)
T ss_dssp TSCEEEE
T ss_pred CCEEEEE
Confidence 5544443
No 172
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=97.06 E-value=0.11 Score=61.90 Aligned_cols=111 Identities=13% Similarity=0.166 Sum_probs=72.5
Q ss_pred ceeeecccC----CcEEEEeecccceeEEEeecccccceeeecccceeeeec-cCCcceeeecCCCCeEEEeecCCCCCC
Q psy948 1432 IEALDIDPV----DEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKS-IGKLTAIAVDWIAHNIYWTVSDRSGSK 1506 (1576)
Q Consensus 1432 i~ald~D~~----~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~-~~~p~glAVDwv~~nLYWTD~~~~~~~ 1506 (1576)
+.+|+..+. ...|||.-.....++++...-.....+. ..-+.+.-.+ .....++|+|..+++||+++.+
T Consensus 222 i~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~-~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~----- 295 (381)
T 3q6k_A 222 IFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGK-LNPELLGNRGKYNDAIALAYDPKTKVIFFAEAN----- 295 (381)
T ss_dssp EEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCC-CCCEEEEECCTTCCEEEEEECTTTCEEEEEESS-----
T ss_pred ceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchh-hceEEeeecCCCCCcceEEEeCCCCeEEEEecc-----
Confidence 334444554 6789999888888888864322222110 0001111111 1233478998789999999986
Q ss_pred CCCeEEEEEcCC-Cc----eEEEee-CCCCCceEEEEecCCCeEEEEecC
Q psy948 1507 PKGKVMVAHNDG-RY----RRSLVS-ENLESPSSIALDPTLGKMFWAETG 1550 (1576)
Q Consensus 1507 ~~~~I~v~~ldG-~~----~~~lv~-~~l~~P~~IavDp~~G~LYWTD~g 1550 (1576)
.+.|..-+.++ .+ ..+|+. ..|..|-+|+|++ .|+||.+.-.
T Consensus 296 -~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~-~g~Lwv~sn~ 343 (381)
T 3q6k_A 296 -TKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDS-KGGLWFMSNG 343 (381)
T ss_dssp -SSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECT-TSCEEEEECS
T ss_pred -CCeEEEEeCCCCccccCceEEEEECCCccccCeEEECC-CCeEEEEECc
Confidence 57899999988 33 455554 6788999999995 6899998754
No 173
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=97.06 E-value=0.29 Score=58.11 Aligned_cols=78 Identities=9% Similarity=0.001 Sum_probs=54.3
Q ss_pred CCcceEEEeCCcceEEEecC-------CC-cCeEEEEecCC-CCcEEEEeccC---CCCCcceEEEeccCCeEEEEcCC-
Q psy948 1195 QDPRGITLHPGIGYVYFSSW-------NL-QAYIGKIGMDG-SNFTRILTHED---DIAWPNALTLDYFTERLYWADAH- 1261 (1576)
Q Consensus 1195 ~~P~~iavdP~~g~lywtd~-------g~-~~~I~ra~mdG-s~~~~iv~~~~---~l~~P~gLaiD~~~~rlYw~D~~- 1261 (1576)
..| +|++.|...+||-+.+ |. ...|...++.- ....+|-.... ...+|.+|+++...++||.+...
T Consensus 51 ~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~ 129 (361)
T 2oiz_A 51 FNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASP 129 (361)
T ss_dssp EEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESS
T ss_pred CCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCC
Confidence 468 9999999999999874 22 23466655542 22222322111 23589999999999999999876
Q ss_pred CCeEEEEeCCCC
Q psy948 1262 LDYIASVDLDGK 1273 (1576)
Q Consensus 1262 ~~~I~s~~~dG~ 1273 (1576)
.+.|..+++...
T Consensus 130 ~~~v~v~d~~~~ 141 (361)
T 2oiz_A 130 ATSIGIVDVAKG 141 (361)
T ss_dssp SEEEEEEETTTT
T ss_pred CCeEEEEECCCC
Confidence 688999888754
No 174
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.05 E-value=0.038 Score=62.73 Aligned_cols=115 Identities=16% Similarity=0.118 Sum_probs=77.8
Q ss_pred CcceEEEeCCcceEEEecCC-CcCeEEEEecCCCCcEEEEeccCCCCCcceEEEeccCCeEEEEcCCCCeEEEEeCCCCc
Q psy948 1196 DPRGITLHPGIGYVYFSSWN-LQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKH 1274 (1576)
Q Consensus 1196 ~P~~iavdP~~g~lywtd~g-~~~~I~ra~mdGs~~~~iv~~~~~l~~P~gLaiD~~~~rlYw~D~~~~~I~s~~~dG~~ 1274 (1576)
.|+||+++|. |.||.+.-. ...+|.+.++.-......+.. .....+.|++++ .++||++....+.+..++.....
T Consensus 22 f~~Gl~~~~d-g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l-~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~ 97 (266)
T 2iwa_A 22 FTQGLVYAEN-DTLFESTGLYGRSSVRQVALQTGKVENIHKM-DDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLS 97 (266)
T ss_dssp CEEEEEECST-TEEEEEECSTTTCEEEEEETTTCCEEEEEEC-CTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTE
T ss_pred CcccEEEeCC-CeEEEECCCCCCCEEEEEECCCCCEEEEEec-CCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCc
Confidence 4789999987 799998642 346787777753332222221 123345566665 78999999999999999987332
Q ss_pred eEEEEeCCCccceeEEeeeCCeEEEeccCCCcceeecccccc
Q psy948 1275 KHIVISGQKVPHVFALTLFEDHIYWTDWNTKSINRADKFNAR 1316 (1576)
Q Consensus 1275 r~~v~~~~~~~~P~~lavfed~lYwtd~~~~~i~~~~k~~~~ 1316 (1576)
...-+... .+.+++|+..++++|.++ .++.|..++.-+.+
T Consensus 98 v~~~i~~g-~~~g~glt~Dg~~l~vs~-gs~~l~viD~~t~~ 137 (266)
T 2iwa_A 98 NIKNFTHQ-MKDGWGLATDGKILYGSD-GTSILYEIDPHTFK 137 (266)
T ss_dssp EEEEEECC-SSSCCEEEECSSSEEEEC-SSSEEEEECTTTCC
T ss_pred EEEEEECC-CCCeEEEEECCCEEEEEC-CCCeEEEEECCCCc
Confidence 22222222 467788998899999999 57788888865544
No 175
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.04 E-value=0.081 Score=64.33 Aligned_cols=288 Identities=12% Similarity=0.022 Sum_probs=142.2
Q ss_pred cceEEEecCCCc---CeEEEEecCCCCcEEEEeccCCCCCcceEEEeccCCeEEEEcC---------CCCeEEEEeCCCC
Q psy948 1206 IGYVYFSSWNLQ---AYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADA---------HLDYIASVDLDGK 1273 (1576)
Q Consensus 1206 ~g~lywtd~g~~---~~I~ra~mdGs~~~~iv~~~~~l~~P~gLaiD~~~~rlYw~D~---------~~~~I~s~~~dG~ 1273 (1576)
..++|.++.+.. ..|...+++ ..+.+-... .-.+| ||+++...++||.++. ..+.|..++....
T Consensus 84 ~~~vyV~n~~~~~~~~~VsVID~~--t~~vv~~I~-vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 84 ARRVYIQDPAHFAAITQQFVIDGS--TGRILGMTD-GGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp TTEEEEEECTTTCSSEEEEEEETT--TTEEEEEEE-ECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCEEEEECCCcCCCCCeEEEEECC--CCEEEEEEE-CCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 356777776531 345444443 323322221 23579 9999999999999985 3567888887654
Q ss_pred ce-EEEEeC--C---CccceeEEee--eCCeEEEeccC-CCcceeeccccccccccceecccccccCCCcceeeccCCce
Q psy948 1274 HK-HIVISG--Q---KVPHVFALTL--FEDHIYWTDWN-TKSINRADKFNAREIQAGILHHCMNITGGSGYLCTCYQGFI 1344 (1576)
Q Consensus 1274 ~r-~~v~~~--~---~~~~P~~lav--fed~lYwtd~~-~~~i~~~~k~~~~~~~~~~~~~c~n~~g~~~~~C~C~~G~~ 1344 (1576)
.. ..+.-+ . ....|.++++ .+.++|.++.. .++|..++.-+++.+.... +.+ + ..
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~------v~g-----~-----~~ 223 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLD------VPD-----C-----YH 223 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEE------CCS-----E-----EE
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEE------cCC-----c-----ee
Confidence 43 223211 1 1234555555 67799999875 6777777765554332100 000 0 00
Q ss_pred eccCCCccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceeccCCceEEEEecCCceeeeccccccccc
Q psy948 1345 IDKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKANDNKLTIVYSNGPEIRAYETHKRRFRD 1424 (1576)
Q Consensus 1345 ~~~~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~~~~~~ll~s~~~~Ir~i~~~~~~~~~ 1424 (1576)
+.+. ....|.=.+++|- ++++......+..... ....
T Consensus 224 ~~p~------------------------g~~~~v~~~~dG~----------------~~~V~~~~~~v~~~~~---~~~~ 260 (426)
T 3c75_H 224 IFPA------------------------SPTVFYMNCRDGS----------------LARVDFADGETKVTNT---EVFH 260 (426)
T ss_dssp EEEE------------------------ETTEEEEEETTSS----------------EEEEECCTTCCEEEEC---CCCS
T ss_pred eccC------------------------CCcEEEEEcCCCC----------------EEEEECCCCcEEEEee---eeec
Confidence 0000 0001111112221 1111111111111000 0000
Q ss_pred cccccccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccce--eeeeccCCcce---eeecCCCCeEEEee
Q psy948 1425 VISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQD--LGIKSIGKLTA---IAVDWIAHNIYWTV 1499 (1576)
Q Consensus 1425 ~v~~~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~--~~~~~~~~p~g---lAVDwv~~nLYWTD 1499 (1576)
+ ........+.|.+..+++||+.. .++++.+++.+... .+....... ..+.....|.| ||++.-++.||.++
T Consensus 261 v-~~~p~~~~~~~~~dg~~~~~~s~-~g~V~ViD~~~~~~-~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~ 337 (426)
T 3c75_H 261 T-EDELLINHPAFSLRSGRLVWPTY-TGKIFQADLTAEGA-TFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLV 337 (426)
T ss_dssp C-TTSCBCSCCEECTTTCEEEEEBT-TSEEEEEEECSSCE-EECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEE
T ss_pred c-CCCceeeEeeecCCCCEEEEEeC-CCcEEEEeccCCce-EEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEe
Confidence 0 01111223455666777777654 46677666543221 111100000 00011113445 89999999999997
Q ss_pred cCCCC---CCCCCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCC-eEEEEecCCCCcEEEeecC
Q psy948 1500 SDRSG---SKPKGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLG-KMFWAETGASPRIESAWMD 1561 (1576)
Q Consensus 1500 ~~~~~---~~~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G-~LYWTD~g~~~~Iera~mD 1561 (1576)
..+.. ....++|.|.++.......-|..+ ..|.+|++.|... +||-+.++.+ .|...++.
T Consensus 338 ~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg-~~P~gia~spDg~~~lyv~n~~s~-~VsVID~~ 401 (426)
T 3c75_H 338 DQRDEWKHKAASRFVVVLNAETGERINKIELG-HEIDSINVSQDAEPLLYALSAGTQ-TLHIYDAA 401 (426)
T ss_dssp EECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECCSSSCEEEEEETTTT-EEEEEETT
T ss_pred cccccccccCCCCEEEEEECCCCeEEEEEECC-CCcCeEEEccCCCEEEEEEcCCCC-eEEEEECC
Confidence 53210 001357999988665433222211 2599999999988 8888887644 56555554
No 176
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.00 E-value=0.01 Score=66.86 Aligned_cols=69 Identities=12% Similarity=0.227 Sum_probs=53.0
Q ss_pred ceEEEeccCCeEEEEcCCCCeEEEEeCCCCc-eEEEEeCCCccceeE--EeeeCCeEEEeccCCCcceeecccccccc
Q psy948 1244 NALTLDYFTERLYWADAHLDYIASVDLDGKH-KHIVISGQKVPHVFA--LTLFEDHIYWTDWNTKSINRADKFNAREI 1318 (1576)
Q Consensus 1244 ~gLaiD~~~~rlYw~D~~~~~I~s~~~dG~~-r~~v~~~~~~~~P~~--lavfed~lYwtd~~~~~i~~~~k~~~~~~ 1318 (1576)
.||+++ .++||.+......|..+++.... .+.++. ..+|+ |++.++.||.++|..+.++.++.-+.+.+
T Consensus 58 qGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~----~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~ 129 (268)
T 3nok_A 58 QGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWMERL----GNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRE 129 (268)
T ss_dssp EEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEEEC----TTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEE
T ss_pred ceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEECC----CCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEE
Confidence 577776 68999999999889999987443 333332 34565 99999999999999999998887665543
No 177
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=96.99 E-value=0.016 Score=69.14 Aligned_cols=156 Identities=12% Similarity=0.106 Sum_probs=95.4
Q ss_pred Cceeeeccccccccccccccccceeeecc-c--C----CcEEEEeecccceeEEEeecccccceeee-----cccceeee
Q psy948 1410 PEIRAYETHKRRFRDVISDERRIEALDID-P--V----DEIIYWVDSYDRNIRRSFMLEAQKGQVQA-----GFGQDLGI 1477 (1576)
Q Consensus 1410 ~~Ir~i~~~~~~~~~~v~~~~~i~ald~D-~--~----~~~vYWsD~~~~~I~r~~l~~~~~~~v~~-----~~~~~~~~ 1477 (1576)
..|+++.+.... +.....+..|.+| . . .+.+|.+|.....|..+++.....-.+.. .....+.+
T Consensus 136 ~li~~y~~p~~~----~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i 211 (381)
T 3q6k_A 136 PEVVRYYFPTRL----VEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDY 211 (381)
T ss_dssp CEEEEEECCGGG----CCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEE
T ss_pred eeEEEEECCHHh----cccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEE
Confidence 456666665332 1122445556666 2 2 67899999888777777665433322221 00011122
Q ss_pred ec-----cCCcceeeecCC----CCeEEEeecCCCCCCCCCeEEEEE---c-CCC---ceEEEeeCC-CCCceEEEEecC
Q psy948 1478 KS-----IGKLTAIAVDWI----AHNIYWTVSDRSGSKPKGKVMVAH---N-DGR---YRRSLVSEN-LESPSSIALDPT 1540 (1576)
Q Consensus 1478 ~~-----~~~p~glAVDwv----~~nLYWTD~~~~~~~~~~~I~v~~---l-dG~---~~~~lv~~~-l~~P~~IavDp~ 1540 (1576)
.+ .....|||+... .+.|||.-.. ..++..+. | +++ .-+.+-..+ ..+..++|+|+.
T Consensus 212 ~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~pls------s~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~ 285 (381)
T 3q6k_A 212 GGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGS------AIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPK 285 (381)
T ss_dssp TTEEEEECCCEEEEEECCCCTTSCCEEEEEESS------CSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTT
T ss_pred CCEEeEeccCceEEEecCCcCCCCeEEEEEECC------CCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCC
Confidence 22 346789999988 7899999764 34566664 2 222 223333333 355668899999
Q ss_pred CCeEEEEecCCCCcEEEeecCC-----CCcEEEE-ecCCCCC
Q psy948 1541 LGKMFWAETGASPRIESAWMDG-----SHRSATQ-ISNRQAP 1576 (1576)
Q Consensus 1541 ~G~LYWTD~g~~~~Iera~mDG-----s~r~~i~-~~~~~~P 1576 (1576)
+|.||+++...+ .|.+.+.++ .+..+|+ ...|+||
T Consensus 286 ~G~ly~~~~~~~-aI~~w~~~~~~~~~~n~~~l~~d~~l~~p 326 (381)
T 3q6k_A 286 TKVIFFAEANTK-QVSCWNTQKMPLRMKNTDVVYTSSRFVFG 326 (381)
T ss_dssp TCEEEEEESSSS-EEEEEETTSCSBCGGGEEEEEECTTCCSE
T ss_pred CCeEEEEeccCC-eEEEEeCCCCccccCceEEEEECCCcccc
Confidence 999999998765 899999998 3444444 5567776
No 178
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.98 E-value=0.046 Score=60.99 Aligned_cols=79 Identities=14% Similarity=0.069 Sum_probs=55.5
Q ss_pred CCCCCcceEEEeccCCeEEEEcCC--CCeEEEEeCCCCceEEEEeCCCccceeEEeeeCCeEEEeccCCCcceeeccccc
Q psy948 1238 DDIAWPNALTLDYFTERLYWADAH--LDYIASVDLDGKHKHIVISGQKVPHVFALTLFEDHIYWTDWNTKSINRADKFNA 1315 (1576)
Q Consensus 1238 ~~l~~P~gLaiD~~~~rlYw~D~~--~~~I~s~~~dG~~r~~v~~~~~~~~P~~lavfed~lYwtd~~~~~i~~~~k~~~ 1315 (1576)
+....-.||+++- ++||.+... .+.|..+++.......-+.-..-....+|++.++.||.++|..+.++.++.-+.
T Consensus 18 d~~~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl 95 (243)
T 3mbr_X 18 DTTAFTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATL 95 (243)
T ss_dssp CTTCCEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTT
T ss_pred CCccccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcC
Confidence 3445566899874 899999775 468999999755433322222222335678899999999999999998887665
Q ss_pred ccc
Q psy948 1316 REI 1318 (1576)
Q Consensus 1316 ~~~ 1318 (1576)
+.+
T Consensus 96 ~~~ 98 (243)
T 3mbr_X 96 TPR 98 (243)
T ss_dssp EEE
T ss_pred cEE
Confidence 543
No 179
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.96 E-value=0.0029 Score=78.04 Aligned_cols=134 Identities=14% Similarity=0.088 Sum_probs=85.2
Q ss_pred cccccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeee-eccCCcceeeecCC---CCeEEEeecCC
Q psy948 1427 SDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGI-KSIGKLTAIAVDWI---AHNIYWTVSDR 1502 (1576)
Q Consensus 1427 ~~~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~-~~~~~p~glAVDwv---~~nLYWTD~~~ 1502 (1576)
..+..+++|++++. ++||.++...++|+++...+.....+ ......+.. .+.+.+.|||+++- ++.||++.+..
T Consensus 24 ~~l~~P~~~a~~pd-G~l~V~e~~gg~I~~~~~~~g~~~~~-~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~ 101 (454)
T 1cru_A 24 SNLNKPHALLWGPD-NQIWLTERATGKILRVNPESGSVKTV-FQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFK 101 (454)
T ss_dssp CCCSSEEEEEECTT-SCEEEEETTTCEEEEECTTTCCEEEE-EECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEE
T ss_pred CCCCCceEEEEcCC-CcEEEEEcCCCEEEEEECCCCcEeEE-ecCCccccccCCCCceeEEEECCCcCcCCEEEEEEecc
Confidence 45678899999986 47999988777898876432221111 111111100 13455669999987 89999998631
Q ss_pred CC---CC---CCCeEEEEEcCCC-----ceEEEee----CCCCCceEEEEecCCCeEEEEecC--C--------------
Q psy948 1503 SG---SK---PKGKVMVAHNDGR-----YRRSLVS----ENLESPSSIALDPTLGKMFWAETG--A-------------- 1551 (1576)
Q Consensus 1503 ~~---~~---~~~~I~v~~ldG~-----~~~~lv~----~~l~~P~~IavDp~~G~LYWTD~g--~-------------- 1551 (1576)
.. .. ...+|.+..+++. ..++|+. .....+.+|+++| .|+||++... .
T Consensus 102 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~p-DG~Lyv~~Gd~~~~~~~~~~~~~~~~~ 180 (454)
T 1cru_A 102 NPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGP-DQKIYYTIGDQGRNQLAYLFLPNQAQH 180 (454)
T ss_dssp CTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECT-TSCEEEEECCTTTTSGGGTTSCCCTTC
T ss_pred ccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECC-CCeEEEEECCCCCCCcccccccccccc
Confidence 00 00 0246777776542 3455653 2346689999998 6899999641 1
Q ss_pred ---------------CCcEEEeecCCC
Q psy948 1552 ---------------SPRIESAWMDGS 1563 (1576)
Q Consensus 1552 ---------------~~~Iera~mDGs 1563 (1576)
..+|.|.+.||+
T Consensus 181 ~p~~~~~~aq~~~~~~G~IlRi~~dG~ 207 (454)
T 1cru_A 181 TPTQQELNGKDYHTYMGKVLRLNLDGS 207 (454)
T ss_dssp CCCHHHHHTTCCTTCSSEEEEECTTSC
T ss_pred ccccccccccCCCCCCeeEEEEeCCCC
Confidence 368999999998
No 180
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=96.94 E-value=0.00032 Score=75.67 Aligned_cols=61 Identities=23% Similarity=0.677 Sum_probs=51.2
Q ss_pred ccccccCCCcceeeccCCceeccCCCccccCCCCccCC--CCccc--cccccCC-----CceEEEcCCCcEecC
Q psy948 1325 HCMNITGGSGYLCTCYQGFIIDKNNAKKCLDVDECATG--IHHCS--QVCTNLN-----GTYACSCNAGFTLSD 1389 (1576)
Q Consensus 1325 ~c~n~~g~~~~~C~C~~G~~~~~~~~~~c~d~neC~~~--~~~Cs--~lC~n~~-----gsy~C~Cp~G~~l~d 1389 (1576)
.|.++.++ |+|.|++||.+. ....|+++++|... ..+|. +.|+++. ++|+|.|++||++..
T Consensus 17 ~C~~~~g~--~~C~C~~G~~g~--~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~ 86 (186)
T 1z1y_A 17 QLVQMSNH--FXCMCNEGLVHL--SENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXE 86 (186)
T ss_dssp EEEECSSC--EEEEECTTEEEE--ETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEET
T ss_pred EeECCCCC--eEeECCCCCccC--CCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCC
Confidence 57777775 999999999875 35689999999854 56796 5899998 899999999999863
No 181
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=96.91 E-value=0.00039 Score=62.18 Aligned_cols=33 Identities=27% Similarity=0.695 Sum_probs=24.9
Q ss_pred cCccccccCCCccc--ccceeCCCeeeee-cCCCccc
Q psy948 1076 NVDECAKVETNQCG--HKCVDTLTGYYCE-CNTGYND 1109 (1576)
Q Consensus 1076 didEC~~~~~~~Cs--q~C~Nt~Gsy~C~-C~~Gy~l 1109 (1576)
|||||+. ..+.|. +.|+|++|||+|. +..||.+
T Consensus 2 DidEC~~-~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~ 37 (71)
T 2kl7_A 2 DVNECLT-IPEACKGEMKCINHYGGYLCLPRSAAVIN 37 (71)
T ss_dssp CSCCTTC-CCCSCTTEEEEEETTCCEEEEETTSCCCS
T ss_pred ccccccC-CCCCCCCCCEeECCCCCeEecccCCcccc
Confidence 5999986 467895 4899999999998 2234443
No 182
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=96.91 E-value=0.66 Score=55.32 Aligned_cols=80 Identities=14% Similarity=0.080 Sum_probs=51.1
Q ss_pred Ccce---eeecCCCCeEEEeecCCCC---CCCCCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCC-eEEEEecCCCCc
Q psy948 1482 KLTA---IAVDWIAHNIYWTVSDRSG---SKPKGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLG-KMFWAETGASPR 1554 (1576)
Q Consensus 1482 ~p~g---lAVDwv~~nLYWTD~~~~~---~~~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G-~LYWTD~g~~~~ 1554 (1576)
.|.| ++++.-++.||.+...+.. ....++|.|.++.......-|. .-..|.+|++.|... +||-+.++.+ .
T Consensus 265 ~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~-~g~~p~~i~~s~Dg~~~l~v~~~~~~-~ 342 (373)
T 2mad_H 265 RPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS-LGHDVDAISVAQDGGPDLYALSAGTE-V 342 (373)
T ss_pred ecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE-CCCCcCeEEECCCCCeEEEEEcCCCC-e
Confidence 3555 8999989999998642110 0123679999887654322222 223699999999877 5666665543 6
Q ss_pred EEEeecCCC
Q psy948 1555 IESAWMDGS 1563 (1576)
Q Consensus 1555 Iera~mDGs 1563 (1576)
|...++...
T Consensus 343 V~ViD~~t~ 351 (373)
T 2mad_H 343 LHIYDAGAG 351 (373)
T ss_pred EEEEECCCC
Confidence 766666543
No 183
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=96.89 E-value=0.00046 Score=67.23 Aligned_cols=47 Identities=32% Similarity=0.639 Sum_probs=38.6
Q ss_pred CccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceeccC
Q psy948 1350 AKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKAND 1399 (1576)
Q Consensus 1350 ~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~~ 1399 (1576)
+..| ++|||..++++|++.|++++++|+|.|++||+|.++. .|.+++
T Consensus 24 ~~~C-d~neC~~~~~~C~~~C~n~~g~y~C~C~~Gy~g~~g~--~C~did 70 (107)
T 2w2n_E 24 QGAM-GTNECLDNNGGCSYVCNDLKIGYECLCPDGFQLVAQR--RCEDID 70 (107)
T ss_dssp SCCB-SCCGGGTGGGGCSSEEECCSBSCEEECCTTCEEETTT--EEEC--
T ss_pred CCCC-cCccCcCCCCCCCCEeEeCCCCeEEECCCCccccCCC--cccccc
Confidence 3456 7899998889999999999999999999999997554 587543
No 184
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=96.82 E-value=0.029 Score=63.35 Aligned_cols=134 Identities=10% Similarity=0.041 Sum_probs=81.1
Q ss_pred cccceeeecccCCcEEEEeecccceeEEEeecccccceeeeccccee-eeeccCCcceeeecCCCCeEEEeecCCCCCCC
Q psy948 1429 ERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDL-GIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKP 1507 (1576)
Q Consensus 1429 ~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~-~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~ 1507 (1576)
...+.+|+++ ..+++|.++...+.|+...+.......++......+ ........+|||+|..++.||-+... .
T Consensus 69 ~~D~EGIa~~-~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~-~---- 142 (255)
T 3qqz_A 69 VKDLETIEYI-GDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEK-N---- 142 (255)
T ss_dssp CSSEEEEEEC-STTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEES-S----
T ss_pred CCChHHeEEe-CCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECc-C----
Confidence 3567888887 455666777777888876665433211111111111 01122345999999998888887542 1
Q ss_pred CCeEEEEE--cCCCceEEEe------eCCCCCceEEEEecCCCeEEEEecCCCCcEEEeecCCCCcEEEE
Q psy948 1508 KGKVMVAH--NDGRYRRSLV------SENLESPSSIALDPTLGKMFWAETGASPRIESAWMDGSHRSATQ 1569 (1576)
Q Consensus 1508 ~~~I~v~~--ldG~~~~~lv------~~~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~mDGs~r~~i~ 1569 (1576)
...|...+ +.+..-+++- ...+..+-+|++||.+|.||..... +.+|...+++|.-+..+.
T Consensus 143 p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~-s~~L~~~d~~g~~~~~~~ 211 (255)
T 3qqz_A 143 PIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHE-SRALQEVTLVGEVIGEMS 211 (255)
T ss_dssp SEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETT-TTEEEEECTTCCEEEEEE
T ss_pred CceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECC-CCeEEEEcCCCCEEEEEE
Confidence 22555554 1222222221 1245678999999999999988754 458888888888554444
No 185
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=96.81 E-value=0.00064 Score=69.89 Aligned_cols=54 Identities=30% Similarity=0.760 Sum_probs=43.9
Q ss_pred cccCCCcceeeccCCceeccCCCcccc-CCCCccCCCCccccccccCCCceEEEcCCCcEec
Q psy948 1328 NITGGSGYLCTCYQGFIIDKNNAKKCL-DVDECATGIHHCSQVCTNLNGTYACSCNAGFTLS 1388 (1576)
Q Consensus 1328 n~~g~~~~~C~C~~G~~~~~~~~~~c~-d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~ 1388 (1576)
++.++ |+|.|++||. +..|. ++++|..++-...+.|+++.++|+|.|++||++.
T Consensus 75 ~~~~~--~~C~C~~G~~-----G~~C~~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~ 129 (143)
T 4d90_A 75 DTFIG--YVCKCPRGFN-----GIHCQHNINECEVEPCKNGGICTDLVANYSCECPGEFMGR 129 (143)
T ss_dssp TEECC--EEEECCTTEE-----STTSCEECCTTTTCCSCTTCEEEEETTEEEEECCTTCBST
T ss_pred CCCCC--eEeECcCCCc-----CCCcccCCCcCCCCCCCCCCEeECCCCCeEeECCCCCccC
Confidence 45554 9999999995 46786 9999985443335799999999999999999975
No 186
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=96.74 E-value=0.0008 Score=84.84 Aligned_cols=61 Identities=30% Similarity=0.694 Sum_probs=51.5
Q ss_pred cccccccCCCccee-eccCCceeccCCCccccCCCCccCCCCcccc-----ccccCCCceEEE-cCCCcEec
Q psy948 1324 HHCMNITGGSGYLC-TCYQGFIIDKNNAKKCLDVDECATGIHHCSQ-----VCTNLNGTYACS-CNAGFTLS 1388 (1576)
Q Consensus 1324 ~~c~n~~g~~~~~C-~C~~G~~~~~~~~~~c~d~neC~~~~~~Cs~-----lC~n~~gsy~C~-Cp~G~~l~ 1388 (1576)
..|.++.++ .|+| .|++||+. +++.|++++||..+++.|.+ .|+|+.++|+|. |++||++.
T Consensus 15 g~C~n~~~G-sy~C~~C~~GytG---dg~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~ 82 (634)
T 1yo8_A 15 AQCSSFPDG-SWSCGFCPVGFLG---NGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGN 82 (634)
T ss_dssp CCEEECTTS-CEEECCCCTTBCS---CSSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEEC
T ss_pred CEEecCCCC-CeECCcCCCccCC---CCCCccccccccCCCCcccCCccccceeeccCceecccCCCCcccC
Confidence 367777643 3999 99999974 35789999999988888965 899999999998 99999975
No 187
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=96.73 E-value=0.0013 Score=67.04 Aligned_cols=58 Identities=29% Similarity=0.811 Sum_probs=45.8
Q ss_pred cccccccCCCcceeeccCCceeccCCCccc-cCCCCccCCCCccccccccCCCceEEEcCCCcEec
Q psy948 1324 HHCMNITGGSGYLCTCYQGFIIDKNNAKKC-LDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLS 1388 (1576)
Q Consensus 1324 ~~c~n~~g~~~~~C~C~~G~~~~~~~~~~c-~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~ 1388 (1576)
..|.++.++ |+|.|++||.. ..| .++++|..++-...+.|++.+++|+|.|++||++.
T Consensus 19 g~C~~~~g~--~~C~C~~Gy~G-----~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~ 77 (135)
T 2vj3_A 19 GKCINTLGS--FECQCLQGYTG-----PRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGV 77 (135)
T ss_dssp CEEEECSSS--EEEECCTTEES-----TTSCEECCTTTTCCCCSSCEEEECSSCEEEECCTTEESS
T ss_pred CEeECCCCC--EEEECCCCCcC-----CcccccCccCCCCCCCCCCEEeCCCCCceeeCCCCCcCC
Confidence 357777776 99999999974 456 47899986433334789999999999999999863
No 188
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=96.72 E-value=0.00092 Score=61.70 Aligned_cols=35 Identities=31% Similarity=0.960 Sum_probs=30.3
Q ss_pred cCccccccCCCccc-ccceeCCCeeeeecCCCcccCCC
Q psy948 1076 NVDECAKVETNQCG-HKCVDTLTGYYCECNTGYNDDDI 1112 (1576)
Q Consensus 1076 didEC~~~~~~~Cs-q~C~Nt~Gsy~C~C~~Gy~l~~~ 1112 (1576)
+||||+. .++|. +.|+|+.|+|+|.|++||.+.+.
T Consensus 43 dideC~~--~~~C~~~~C~n~~g~y~C~C~~G~~g~~~ 78 (82)
T 1emn_A 43 DTDECSV--GNPCGNGTCKNVIGGFECTCEEGFEPGPM 78 (82)
T ss_dssp ECCGGGT--CCTTSSSCEEECSSSEEECCSSSSCCCSS
T ss_pred CcccccC--CCCCCCCEeECCCCCEEeECCCCeEeCCC
Confidence 6999984 46786 59999999999999999998754
No 189
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=96.71 E-value=0.29 Score=57.90 Aligned_cols=122 Identities=13% Similarity=0.101 Sum_probs=79.1
Q ss_pred ccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeec-cCCcceeeecCCCCeEEEeecCCCCCCCC
Q psy948 1430 RRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKS-IGKLTAIAVDWIAHNIYWTVSDRSGSKPK 1508 (1576)
Q Consensus 1430 ~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~-~~~p~glAVDwv~~nLYWTD~~~~~~~~~ 1508 (1576)
..+.+++|++..+.||.++...+.|+...++. .+++... ..+.+.. ...|.+||+++.++.||.+... .
T Consensus 145 ~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~--~g~~~~~--~~~~~~~~g~~p~~~~~spdg~~l~v~~~~------~ 214 (365)
T 1jof_A 145 TGIHGMVFDPTETYLYSADLTANKLWTHRKLA--SGEVELV--GSVDAPDPGDHPRWVAMHPTGNYLYALMEA------G 214 (365)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECT--TSCEEEE--EEEECSSTTCCEEEEEECTTSSEEEEEETT------T
T ss_pred CcceEEEECCCCCEEEEEcCCCCEEEEEEECC--CCCEEEe--eeEecCCCCCCCCEeEECCCCCEEEEEECC------C
Confidence 45778899999889999988788888777652 1111100 0111111 3469999999999999998753 4
Q ss_pred CeEEEEEcC---CCceE---EEe--eCCC---C-------CceEEE-EecCCCeEEEEecCCCC----cEEEeecC
Q psy948 1509 GKVMVAHND---GRYRR---SLV--SENL---E-------SPSSIA-LDPTLGKMFWAETGASP----RIESAWMD 1561 (1576)
Q Consensus 1509 ~~I~v~~ld---G~~~~---~lv--~~~l---~-------~P~~Ia-vDp~~G~LYWTD~g~~~----~Iera~mD 1561 (1576)
++|.+.+++ |+... .+. ..+. . .|.+|+ +.|...+||-+..+... .|....++
T Consensus 215 ~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 215 NRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLR 290 (365)
T ss_dssp TEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEEC
T ss_pred CeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEEC
Confidence 688888765 44321 121 1111 2 489999 99998899988865432 56666553
No 190
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=96.67 E-value=0.55 Score=54.14 Aligned_cols=93 Identities=12% Similarity=0.008 Sum_probs=57.3
Q ss_pred eeEEecCCCeEEEEeccCCc-eEecc-cccCCcceEEEeCCcceEEEecCCCcCeEEEEecCCCCcEEEEeccCC----C
Q psy948 1167 LCALDVRSIKLDVAELDGTN-RKTLK-TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDD----I 1240 (1576)
Q Consensus 1167 ~~avD~~~~~I~v~~ldG~~-r~~l~-~~l~~P~~iavdP~~g~lywtd~g~~~~I~ra~mdGs~~~~iv~~~~~----l 1240 (1576)
+|++....++|.+.++.... ...+. .....|.++++.|...++|.+..+ ...|....++.......+..... .
T Consensus 13 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~-~~~i~~~d~~t~~~~~~~~~~~~~~~~~ 91 (349)
T 1jmx_B 13 YMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH-YGDIYGIDLDTCKNTFHANLSSVPGEVG 91 (349)
T ss_dssp EEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETT-TTEEEEEETTTTEEEEEEESCCSTTEEE
T ss_pred EEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCC-CCcEEEEeCCCCcEEEEEEccccccccc
Confidence 34555566677777765432 22222 222269999999998889888743 45677777764333323322111 2
Q ss_pred CCcceEEEeccCCeEEEEcC
Q psy948 1241 AWPNALTLDYFTERLYWADA 1260 (1576)
Q Consensus 1241 ~~P~gLaiD~~~~rlYw~D~ 1260 (1576)
..|.+++++...++||.+..
T Consensus 92 ~~~~~~~~spdg~~l~~~~~ 111 (349)
T 1jmx_B 92 RSMYSFAISPDGKEVYATVN 111 (349)
T ss_dssp ECSSCEEECTTSSEEEEEEE
T ss_pred ccccceEECCCCCEEEEEcc
Confidence 34889999988888888763
No 191
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=96.58 E-value=0.88 Score=57.48 Aligned_cols=103 Identities=6% Similarity=-0.095 Sum_probs=67.7
Q ss_pred eeEEecCCCeEEEEeccCCceEecccccCCcceEEEeCCcceEEEecCCCcCeEEEEecC-CCCcEEEEeccCCCCCcce
Q psy948 1167 LCALDVRSIKLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMD-GSNFTRILTHEDDIAWPNA 1245 (1576)
Q Consensus 1167 ~~avD~~~~~I~v~~ldG~~r~~l~~~l~~P~~iavdP~~g~lywtd~g~~~~I~ra~md-Gs~~~~iv~~~~~l~~P~g 1245 (1576)
+|.+....++|.|.+++......-+..-..|.++++.|...+||.+.. ...|...++. .+.. .+... ..-..|.+
T Consensus 169 ~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~--dg~V~viD~~~~t~~-~v~~i-~~G~~P~~ 244 (567)
T 1qks_A 169 FSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGR--DGKVNMIDLWMKEPT-TVAEI-KIGSEARS 244 (567)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEET--TSEEEEEETTSSSCC-EEEEE-ECCSEEEE
T ss_pred EEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcC--CCeEEEEECCCCCCc-EeEEE-ecCCCCce
Confidence 344555667777776654322211223346889999999999998863 4578887774 3322 22111 12346999
Q ss_pred EEEe----ccCCeEEEEcCCCCeEEEEeCCCC
Q psy948 1246 LTLD----YFTERLYWADAHLDYIASVDLDGK 1273 (1576)
Q Consensus 1246 LaiD----~~~~rlYw~D~~~~~I~s~~~dG~ 1273 (1576)
|++. +..++||.+....+.|..++....
T Consensus 245 ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~ 276 (567)
T 1qks_A 245 IETSKMEGWEDKYAIAGAYWPPQYVIMDGETL 276 (567)
T ss_dssp EEECCSTTCTTTEEEEEEEETTEEEEEETTTC
T ss_pred eEEccccCCCCCEEEEEEccCCeEEEEECCCC
Confidence 9999 578899999999899988875443
No 192
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=96.56 E-value=0.25 Score=59.89 Aligned_cols=121 Identities=12% Similarity=0.062 Sum_probs=75.7
Q ss_pred eecccCCcEEEEeec-----ccceeEEEeeccccc--ceeeeccccee--ee-------ec-cCCcceeeecCCCCeEEE
Q psy948 1435 LDIDPVDEIIYWVDS-----YDRNIRRSFMLEAQK--GQVQAGFGQDL--GI-------KS-IGKLTAIAVDWIAHNIYW 1497 (1576)
Q Consensus 1435 ld~D~~~~~vYWsD~-----~~~~I~r~~l~~~~~--~~v~~~~~~~~--~~-------~~-~~~p~glAVDwv~~nLYW 1497 (1576)
+++++....+|.+.. -.++|.....++..- .+++......+ .+ .. ...|.+|+|..-.+.||.
T Consensus 258 f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYV 337 (462)
T 2ece_A 258 PLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYL 337 (462)
T ss_dssp ECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEE
T ss_pred eeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEE
Confidence 456888899999887 777776555443110 01110000000 00 01 246899999999999999
Q ss_pred eecCCCCCCCCCeEEEEEcC-CCceEEE--eeCC-C-------------CCceEEEEecCCCeEEEEe--------c---
Q psy948 1498 TVSDRSGSKPKGKVMVAHND-GRYRRSL--VSEN-L-------------ESPSSIALDPTLGKMFWAE--------T--- 1549 (1576)
Q Consensus 1498 TD~~~~~~~~~~~I~v~~ld-G~~~~~l--v~~~-l-------------~~P~~IavDp~~G~LYWTD--------~--- 1549 (1576)
++.+ .+.|.|.+.. ....+.+ +..+ . ..|+.|+|.|...+||+|. .
T Consensus 338 Snrg------~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaNsl~~~wd~Qfyp 411 (462)
T 2ece_A 338 SLWG------IGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTNSLYSTWDNQFYP 411 (462)
T ss_dssp EETT------TTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEECCCCHHHHHHHST
T ss_pred EeCC------CCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEcCCcccccccccC
Confidence 9986 5789998863 3323322 2222 2 1599999999999999999 2
Q ss_pred -CCCCcEEEeecC
Q psy948 1550 -GASPRIESAWMD 1561 (1576)
Q Consensus 1550 -g~~~~Iera~mD 1561 (1576)
+....|.+...|
T Consensus 412 ~~~~~~~~~~~vd 424 (462)
T 2ece_A 412 EGLKGWMVKLNAN 424 (462)
T ss_dssp TCCCCEEEEEEEC
T ss_pred CCCceEEEEEEec
Confidence 334566656555
No 193
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=96.55 E-value=0.39 Score=58.06 Aligned_cols=124 Identities=8% Similarity=0.010 Sum_probs=81.8
Q ss_pred cceeeecccCCcEEEEeecc--cceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCCC
Q psy948 1431 RIEALDIDPVDEIIYWVDSY--DRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPK 1508 (1576)
Q Consensus 1431 ~i~ald~D~~~~~vYWsD~~--~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~ 1508 (1576)
.+..+.|.+....|+++... ...|+..++.+.....+. .....+..+++.+.++.|+++.... ..
T Consensus 268 ~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~---------~~~~~~~~~~~spdG~~l~~~~~~~----g~ 334 (415)
T 2hqs_A 268 NNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRIT---------WEGSQNQDADVSSDGKFMVMVSSNG----GQ 334 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECC---------CSSSEEEEEEECTTSSEEEEEEECS----SC
T ss_pred cccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEe---------cCCCcccCeEECCCCCEEEEEECcC----Cc
Confidence 45677788888777776532 336776666543221111 1123455788888888899886531 13
Q ss_pred CeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEec-CCCCcEEEeecCCCCcEEEE
Q psy948 1509 GKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAET-GASPRIESAWMDGSHRSATQ 1569 (1576)
Q Consensus 1509 ~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~-g~~~~Iera~mDGs~r~~i~ 1569 (1576)
.+|.+.++++...+.|... ....++++.|...+|+++.. +...+|...+++|...+.|.
T Consensus 335 ~~i~~~d~~~~~~~~l~~~--~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~ 394 (415)
T 2hqs_A 335 QHIAKQDLATGGVQVLSST--FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLP 394 (415)
T ss_dssp EEEEEEETTTCCEEECCCS--SSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECC
T ss_pred eEEEEEECCCCCEEEecCC--CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEee
Confidence 5899999987766554432 27889999998887777654 33447999999998776664
No 194
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=96.51 E-value=0.037 Score=64.80 Aligned_cols=119 Identities=14% Similarity=0.115 Sum_probs=79.6
Q ss_pred ccceeeecccCCcEEEEeecc------cceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCC
Q psy948 1430 RRIEALDIDPVDEIIYWVDSY------DRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRS 1503 (1576)
Q Consensus 1430 ~~i~ald~D~~~~~vYWsD~~------~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~ 1503 (1576)
..+..+.+|+.. +||+++.. .+.|+++. .+ ++. .....+..|.+|+++..++.|||++..
T Consensus 134 ~~~~~i~~d~~G-~l~v~~~~~~~~~~~~~l~~~~-~g----~~~------~~~~~~~~~~~i~~s~dg~~lyv~~~~-- 199 (326)
T 2ghs_A 134 NRSNDGRMHPSG-ALWIGTMGRKAETGAGSIYHVA-KG----KVT------KLFADISIPNSICFSPDGTTGYFVDTK-- 199 (326)
T ss_dssp EEEEEEEECTTS-CEEEEEEETTCCTTCEEEEEEE-TT----EEE------EEEEEESSEEEEEECTTSCEEEEEETT--
T ss_pred CCCCCEEECCCC-CEEEEeCCCcCCCCceEEEEEe-CC----cEE------EeeCCCcccCCeEEcCCCCEEEEEECC--
Confidence 356788888754 57777653 36788776 32 111 112334578899999888899999874
Q ss_pred CCCCCCeEEEEEcC---C-C--ceEEEee--CCCCCceEEEEecCCCeEEEEecCCCCcEEEeecCCCCcEEE
Q psy948 1504 GSKPKGKVMVAHND---G-R--YRRSLVS--ENLESPSSIALDPTLGKMFWAETGASPRIESAWMDGSHRSAT 1568 (1576)
Q Consensus 1504 ~~~~~~~I~v~~ld---G-~--~~~~lv~--~~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~mDGs~r~~i 1568 (1576)
.++|.+.+++ | + .++++.. .....|.+|++|+. |.||.+.++.. +|.+.+.+|.....|
T Consensus 200 ----~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~-G~lwva~~~~~-~v~~~d~~g~~~~~i 266 (326)
T 2ghs_A 200 ----VNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAE-GHIWNARWGEG-AVDRYDTDGNHIARY 266 (326)
T ss_dssp ----TCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTT-SCEEEEEETTT-EEEEECTTCCEEEEE
T ss_pred ----CCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCC-CCEEEEEeCCC-EEEEECCCCCEEEEE
Confidence 4789999985 5 3 2234432 23457999999974 78888887643 788888877644433
No 195
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=96.38 E-value=0.0022 Score=57.29 Aligned_cols=26 Identities=42% Similarity=0.782 Sum_probs=23.1
Q ss_pred CCCCccCCCCccc--cccccCCCceEEE
Q psy948 1355 DVDECATGIHHCS--QVCTNLNGTYACS 1380 (1576)
Q Consensus 1355 d~neC~~~~~~Cs--~lC~n~~gsy~C~ 1380 (1576)
++|||...++.|. +.|+|++|+|+|.
T Consensus 2 DidEC~~~~~~C~~~~~C~Nt~Gsy~C~ 29 (71)
T 2kl7_A 2 DVNECLTIPEACKGEMKCINHYGGYLCL 29 (71)
T ss_dssp CSCCTTCCCCSCTTEEEEEETTCCEEEE
T ss_pred ccccccCCCCCCCCCCEeECCCCCeEec
Confidence 6899988778894 5899999999999
No 196
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=96.30 E-value=0.0012 Score=68.04 Aligned_cols=40 Identities=20% Similarity=0.439 Sum_probs=33.7
Q ss_pred cCccccccCCCcccccc-eeCCCeeeeecCCCcccCCCCccc
Q psy948 1076 NVDECAKVETNQCGHKC-VDTLTGYYCECNTGYNDDDIGTVS 1116 (1576)
Q Consensus 1076 didEC~~~~~~~Csq~C-~Nt~Gsy~C~C~~Gy~l~~~~~~~ 1116 (1576)
++|||+. .+++|.+.| +|+.|+|+|.|++||.|..++..+
T Consensus 84 ~~deC~~-~~~~C~~~C~~n~~g~y~C~C~~Gy~l~~dG~~C 124 (146)
T 1x7a_L 84 LDATCNI-KNGRCKQFCKTGADSKVLCSCTTGYRLAPDQKSC 124 (146)
T ss_dssp EECCTTS-GGGSCSSBCCCCSSSCCCCBCCTTEEECTTSSSE
T ss_pred CCccccC-CCCCCcCCCCCCCCCCEEeEcCCCcEeCCCCCcC
Confidence 4799986 467899999 999999999999999987665443
No 197
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.30 E-value=0.13 Score=58.00 Aligned_cols=111 Identities=12% Similarity=0.044 Sum_probs=65.3
Q ss_pred cceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeec----cCCcceeeecCCCCeEEEeecCCCCCC
Q psy948 1431 RIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKS----IGKLTAIAVDWIAHNIYWTVSDRSGSK 1506 (1576)
Q Consensus 1431 ~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~----~~~p~glAVDwv~~nLYWTD~~~~~~~ 1506 (1576)
..++|.+| .++||-+| +.++|+..+... .+++. .+.+.. +..+. .+.|+.+.||-....
T Consensus 137 eGwGLt~D--g~~L~vSd-Gs~~l~~iDp~T---~~v~~----~I~V~~~g~~v~~lN--eLe~~dG~lyanvw~----- 199 (268)
T 3nok_A 137 EGWGLCYW--NGKLVRSD-GGTMLTFHEPDG---FALVG----AVQVKLRGQPVELIN--ELECANGVIYANIWH----- 199 (268)
T ss_dssp CCCCEEEE--TTEEEEEC-SSSEEEEECTTT---CCEEE----EEECEETTEECCCEE--EEEEETTEEEEEETT-----
T ss_pred ceeEEecC--CCEEEEEC-CCCEEEEEcCCC---CeEEE----EEEeCCCCccccccc--ccEEeCCEEEEEECC-----
Confidence 35677665 57888888 577776544322 11211 111111 11222 355778899866543
Q ss_pred CCCeEEEEEcCC-CceEEEeeC------------CCCCceEEEEecCCCeEEEEecCCCCcEEEeec
Q psy948 1507 PKGKVMVAHNDG-RYRRSLVSE------------NLESPSSIALDPTLGKMFWAETGASPRIESAWM 1560 (1576)
Q Consensus 1507 ~~~~I~v~~ldG-~~~~~lv~~------------~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~m 1560 (1576)
.+.|.|.++.. +-.++|-.. ..+-|.|||+||..++||.|-.. =|++.+..+
T Consensus 200 -s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~-Wp~~~ev~~ 264 (268)
T 3nok_A 200 -SSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKL-WPRLFEVRL 264 (268)
T ss_dssp -CSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETT-CSEEEEEEE
T ss_pred -CCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCC-CCceEEEEE
Confidence 57888888744 333333222 23578999999999999998732 256766655
No 198
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=96.27 E-value=0.0019 Score=68.46 Aligned_cols=52 Identities=33% Similarity=0.690 Sum_probs=41.2
Q ss_pred CCceeccCCCccccCCCCccCCCCc---cccccccCCCceEEEcCCCcEecCCCCCceec
Q psy948 1341 QGFIIDKNNAKKCLDVDECATGIHH---CSQVCTNLNGTYACSCNAGFTLSDGLSGVCKA 1397 (1576)
Q Consensus 1341 ~G~~~~~~~~~~c~d~neC~~~~~~---Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~ 1397 (1576)
.||.+. ..+.+++||...+++ |+|.|+|++|+|+|.|++||+|..+.+ +|++
T Consensus 113 ~Gf~~~----~~~~di~eC~~~~~~~~~C~~~C~n~~g~~~C~C~~Gy~l~~d~~-~C~~ 167 (170)
T 1szb_A 113 TGFEAF----YAAEDIDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKR-TCSE 167 (170)
T ss_dssp CEEEEE----EEEEECCTTCCCTTSCCSSSSEEEEETTEEEEECCTTEEECTTSS-CEEE
T ss_pred cCceee----eeccccCcccCCCCCCCccCCccccCCCCEEEeCCCCcEECCCCC-cccc
Confidence 466543 345688999987665 999999999999999999999975543 7875
No 199
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=96.18 E-value=0.0022 Score=66.29 Aligned_cols=39 Identities=31% Similarity=0.762 Sum_probs=33.6
Q ss_pred cCccccccCCCcccc-cceeCCCeeeeecCCCcccCCCCcc
Q psy948 1076 NVDECAKVETNQCGH-KCVDTLTGYYCECNTGYNDDDIGTV 1115 (1576)
Q Consensus 1076 didEC~~~~~~~Csq-~C~Nt~Gsy~C~C~~Gy~l~~~~~~ 1115 (1576)
|||||+. .+++|.+ .|+|+.|+|+|.|++||.|..+++.
T Consensus 106 dideC~~-~~~~C~~g~C~n~~g~y~C~C~~Gy~g~~~~~~ 145 (147)
T 2w86_A 106 DIDECEV-FPGVCKNGLCVNTRGSFKCQCPSGMTLDATGRI 145 (147)
T ss_dssp ECCHHHH-STTCSSSSEEEEETTEEEEECCTTCCBCTTSSC
T ss_pred ccccccC-CCCCCCCCEEECCCCCEEeeCCCCCccCCCCCe
Confidence 5999986 5688986 9999999999999999999866543
No 200
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=96.16 E-value=0.0024 Score=60.17 Aligned_cols=53 Identities=23% Similarity=0.599 Sum_probs=41.0
Q ss_pred cccccccCCCcceeeccCCceeccCCCcccc--CCCCccCCCCccc--cccccCC--CceEEEcCCCcEe
Q psy948 1324 HHCMNITGGSGYLCTCYQGFIIDKNNAKKCL--DVDECATGIHHCS--QVCTNLN--GTYACSCNAGFTL 1387 (1576)
Q Consensus 1324 ~~c~n~~g~~~~~C~C~~G~~~~~~~~~~c~--d~neC~~~~~~Cs--~lC~n~~--gsy~C~Cp~G~~l 1387 (1576)
..|.|..+ +|+|.|++||. .|. ++++|.. .+|. ..|++.. ++|+|.||+||++
T Consensus 23 ~pC~n~~~--~y~C~C~~G~~-------~C~~~~~~~C~~--~pC~ngg~C~~~~~~~~~~C~C~~G~~G 81 (91)
T 1tpg_A 23 RPVLRSNR--VEYCWCNSGRA-------QCHSVPVKSCSE--PRCFNGGTCQQALYFSDFVCQCPEGFAG 81 (91)
T ss_dssp EECSSSSC--EEEEECSSSCC-------BCCEECEEECSS--CCSCTTCEEEEESSSSCEEEECCTTCBS
T ss_pred CccccCCC--CcEeECCCCCc-------ccccCcCCcccC--CCCCCCCEeecCCCCCCeEeECCCCCcC
Confidence 34556554 49999999995 464 6888975 4574 5899887 9999999999986
No 201
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=96.12 E-value=0.93 Score=53.34 Aligned_cols=128 Identities=9% Similarity=-0.005 Sum_probs=69.5
Q ss_pred ceeeecccCCcEEEEeecc-cc---eeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCC--CC
Q psy948 1432 IEALDIDPVDEIIYWVDSY-DR---NIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRS--GS 1505 (1576)
Q Consensus 1432 i~ald~D~~~~~vYWsD~~-~~---~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~--~~ 1505 (1576)
+..+.|.+..++|+|+... .. .|+..++.+.....+...... ......+.++++.+.++.|+++-.... ..
T Consensus 240 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~---~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 316 (388)
T 3pe7_A 240 CTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPAC---SHLMSNYDGSLMVGDGSDAPVDVQDDSGYKI 316 (388)
T ss_dssp EEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCE---EEEEECTTSSEEEEEECCC------------
T ss_pred cccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCc---eeeeecCCCCeEccCCCcceeEeeecccccc
Confidence 4556788877777664332 22 377776655433222111100 000123556667666777777632100 00
Q ss_pred CCCCeEEEEEcCCCceEEEeeCCC--C--------CceEEEEecCCCeEEEEec-CCCCcEEEeecCC
Q psy948 1506 KPKGKVMVAHNDGRYRRSLVSENL--E--------SPSSIALDPTLGKMFWAET-GASPRIESAWMDG 1562 (1576)
Q Consensus 1506 ~~~~~I~v~~ldG~~~~~lv~~~l--~--------~P~~IavDp~~G~LYWTD~-g~~~~Iera~mDG 1562 (1576)
.....|.+.++++...+.|..... . ....++..|...+|+|+-. +..++|++.++..
T Consensus 317 ~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~~ 384 (388)
T 3pe7_A 317 ENDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLPE 384 (388)
T ss_dssp CCCCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCG
T ss_pred CCCCEEEEEeccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECCh
Confidence 124689999998876666654322 1 3567889998888888764 4456888887763
No 202
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=96.04 E-value=0.13 Score=59.24 Aligned_cols=122 Identities=9% Similarity=0.010 Sum_probs=81.1
Q ss_pred cceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeec----cCCcceeeecCCCCeEEEeecCCC---
Q psy948 1431 RIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKS----IGKLTAIAVDWIAHNIYWTVSDRS--- 1503 (1576)
Q Consensus 1431 ~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~----~~~p~glAVDwv~~nLYWTD~~~~--- 1503 (1576)
.+..+++++..+.||.+....+.|+..++........ +.+.. ...|.+|+++..++.||.+.....
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~-------~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~ 107 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGR-------IDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLEL 107 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEE-------EECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECS
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEee-------EEcCCcccccccccceEECCCCCEEEEEeccccccc
Confidence 4778899998889999988888888776543221110 11111 126899999998889999962100
Q ss_pred CCC--CCCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEecCCCCcEEEeecCCCC
Q psy948 1504 GSK--PKGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAETGASPRIESAWMDGSH 1564 (1576)
Q Consensus 1504 ~~~--~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~mDGs~ 1564 (1576)
... ..+.|.+.++.+......+.. -..|.+|++.|...+||.++ ..|...++.+..
T Consensus 108 ~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~----~~i~~~d~~~~~ 165 (337)
T 1pby_B 108 THFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGLG----RDLHVMDPEAGT 165 (337)
T ss_dssp SCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEES----SSEEEEETTTTE
T ss_pred ccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEeC----CeEEEEECCCCc
Confidence 000 137899999876544333433 45689999999988899983 357777776543
No 203
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=96.03 E-value=0.0035 Score=48.86 Aligned_cols=32 Identities=31% Similarity=0.844 Sum_probs=27.2
Q ss_pred cCccccccCCCcccc--cceeCCCeeeeecCCCcccC
Q psy948 1076 NVDECAKVETNQCGH--KCVDTLTGYYCECNTGYNDD 1110 (1576)
Q Consensus 1076 didEC~~~~~~~Csq--~C~Nt~Gsy~C~C~~Gy~l~ 1110 (1576)
|+|||+. ++|.+ .|+++.++|+|.|++||.+.
T Consensus 2 d~d~C~~---~pC~ngg~C~~~~~~~~C~C~~G~~G~ 35 (39)
T 1edm_B 2 DGDQCES---NPCLNGGSCKDDINSYECWCPFGFEGK 35 (39)
T ss_dssp CCCTTTT---CCCCTTCEEEEETTEEEEECCTTCCST
T ss_pred ccccCCC---CCCCCCCEeEcCCCceEeECCCCCcCC
Confidence 4889973 67875 79999999999999999864
No 204
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=96.03 E-value=0.0021 Score=67.51 Aligned_cols=39 Identities=33% Similarity=0.818 Sum_probs=33.3
Q ss_pred cCccccccCCCcccc-cceeCCCeeeeecCCCcccCCCCcc
Q psy948 1076 NVDECAKVETNQCGH-KCVDTLTGYYCECNTGYNDDDIGTV 1115 (1576)
Q Consensus 1076 didEC~~~~~~~Csq-~C~Nt~Gsy~C~C~~Gy~l~~~~~~ 1115 (1576)
|||||+. .+++|.+ .|+|+.|||+|.|++||.|..+++.
T Consensus 121 dideC~~-~~~~C~~g~C~n~~gsy~C~C~~Gy~g~~d~~~ 160 (162)
T 1uzk_A 121 DIDECQE-LPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRV 160 (162)
T ss_dssp ECCHHHH-CGGGGBTSEEEECSSCEEEECCTTCCBCTTTCB
T ss_pred ccccccC-CCCCcCCCEeEcCCCCEEeeCCCCccCCCCCCc
Confidence 6999986 4678985 9999999999999999999765543
No 205
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=96.02 E-value=0.0021 Score=69.28 Aligned_cols=39 Identities=23% Similarity=0.629 Sum_probs=32.7
Q ss_pred C-ccccccCCCcccccceeCCCeeeeecCCCcccCCCCccc
Q psy948 1077 V-DECAKVETNQCGHKCVDTLTGYYCECNTGYNDDDIGTVS 1116 (1576)
Q Consensus 1077 i-dEC~~~~~~~Csq~C~Nt~Gsy~C~C~~Gy~l~~~~~~~ 1116 (1576)
| |||.. .+++|.+.|+|+.|+|+|.|++||.|..++..+
T Consensus 80 i~deC~~-~~~~C~~~C~n~~gsy~C~C~~Gy~l~~dG~~C 119 (195)
T 1nfu_B 80 TRKLCSL-DNGDCDQFCHEEQNSVVCSCARGYTLADNGKAC 119 (195)
T ss_dssp -CCGGGT-GGGGCSSEEEEETTEEEEECCTTEEECTTSSCE
T ss_pred ccccccC-CCCCCCCEeECCCCCeEEECCCCceeCCCCCcc
Confidence 6 89986 468899999999999999999999987665543
No 206
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=95.98 E-value=3.2 Score=48.87 Aligned_cols=73 Identities=11% Similarity=0.148 Sum_probs=48.2
Q ss_pred ceeeecCCCCeEEEeec-CC-C--CCCCCCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEecCCCCcEEEee
Q psy948 1484 TAIAVDWIAHNIYWTVS-DR-S--GSKPKGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAETGASPRIESAW 1559 (1576)
Q Consensus 1484 ~glAVDwv~~nLYWTD~-~~-~--~~~~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~ 1559 (1576)
..+|++...+.||-+.. .. . +....++|.|.++.......-+..+. |.+|+++|...+||-+.+ ..|...+
T Consensus 257 ~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~---~~v~v~D 331 (361)
T 2oiz_A 257 NLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG---GNVNVYD 331 (361)
T ss_dssp SCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS---SCEEEEE
T ss_pred eEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC---CeEEEEE
Confidence 34999998999998864 10 0 00013578888886654333333333 999999999889998775 3565555
Q ss_pred cC
Q psy948 1560 MD 1561 (1576)
Q Consensus 1560 mD 1561 (1576)
+.
T Consensus 332 ~~ 333 (361)
T 2oiz_A 332 IS 333 (361)
T ss_dssp CS
T ss_pred CC
Confidence 54
No 207
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=95.96 E-value=1.3 Score=53.45 Aligned_cols=82 Identities=12% Similarity=0.086 Sum_probs=56.7
Q ss_pred CeEEEEeccCCceEecccccCCcceEEEeCCcceEEEecCC-CcCeEEEEecCCCCcEEEEeccCCCCCcceEEEeccCC
Q psy948 1175 IKLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWN-LQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTE 1253 (1576)
Q Consensus 1175 ~~I~v~~ldG~~r~~l~~~l~~P~~iavdP~~g~lywtd~g-~~~~I~ra~mdGs~~~~iv~~~~~l~~P~gLaiD~~~~ 1253 (1576)
.+|.+.+++|...+.|...-....++++.|...+|+++... ....|...++.+...+.+.. .-.....+++....+
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~---~~~~~~~~~~spdg~ 235 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVAS---FPRHNGAPAFSPDGS 235 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEEC---CSSCEEEEEECTTSS
T ss_pred ceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeec---CCCcccCEEEcCCCC
Confidence 68888999988777776555567889999998888887754 34678888887655444332 223556677766666
Q ss_pred eEEEEc
Q psy948 1254 RLYWAD 1259 (1576)
Q Consensus 1254 rlYw~D 1259 (1576)
+|+++-
T Consensus 236 ~la~~~ 241 (415)
T 2hqs_A 236 KLAFAL 241 (415)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 666554
No 208
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=95.90 E-value=1.7 Score=54.54 Aligned_cols=148 Identities=9% Similarity=0.012 Sum_probs=85.7
Q ss_pred eeEEecCCCeEEEEeccCCceEec--ccccCCcceEEEeC----CcceEEEecCCCcCeEEEEecCCCCcEEEEeccC--
Q psy948 1167 LCALDVRSIKLDVAELDGTNRKTL--KTAIQDPRGITLHP----GIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHED-- 1238 (1576)
Q Consensus 1167 ~~avD~~~~~I~v~~ldG~~r~~l--~~~l~~P~~iavdP----~~g~lywtd~g~~~~I~ra~mdGs~~~~iv~~~~-- 1238 (1576)
+|..+.. ++|.+.+++....+++ +..-..|++|+++| ...+||-+... ...|...+..-.....++....
T Consensus 193 l~v~~~d-~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~-~~~v~v~D~~t~~~~~~i~~~g~~ 270 (543)
T 1nir_A 193 LLVIGRD-ARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYW-PPQFAIMDGETLEPKQIVSTRGMT 270 (543)
T ss_dssp EEEEETT-SEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEE-SSEEEEEETTTCCEEEEEECCEEC
T ss_pred EEEECCC-CeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCCCEEEEEEcc-CCeEEEEeccccccceeecccCcc
Confidence 3444443 7777777731112222 12335799999999 88889887642 2233333222111122222110
Q ss_pred -------CCCCcceEEEeccCCeEEEEcCCCCeEEEEeCCCCc-eE-EEEeCCCccceeEEeeeCCeEEEeccCCCccee
Q psy948 1239 -------DIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKH-KH-IVISGQKVPHVFALTLFEDHIYWTDWNTKSINR 1309 (1576)
Q Consensus 1239 -------~l~~P~gLaiD~~~~rlYw~D~~~~~I~s~~~dG~~-r~-~v~~~~~~~~P~~lavfed~lYwtd~~~~~i~~ 1309 (1576)
.-.+|.++++....+++|........|..+++.... .. ..+.....++-++++-.+.++|.+....+.|..
T Consensus 271 ~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v 350 (543)
T 1nir_A 271 VDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAV 350 (543)
T ss_dssp SSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEE
T ss_pred cCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEE
Confidence 012567888888889999999999999999986533 22 122222233334444456788888877777777
Q ss_pred ecccccc
Q psy948 1310 ADKFNAR 1316 (1576)
Q Consensus 1310 ~~k~~~~ 1316 (1576)
++..+++
T Consensus 351 ~D~~tg~ 357 (543)
T 1nir_A 351 IDSKDRR 357 (543)
T ss_dssp EETTTTE
T ss_pred EECCCCe
Confidence 7765554
No 209
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=95.90 E-value=1.4 Score=57.16 Aligned_cols=127 Identities=9% Similarity=0.080 Sum_probs=73.7
Q ss_pred ccceeeecccCCcEEEEeec----ccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCC
Q psy948 1430 RRIEALDIDPVDEIIYWVDS----YDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGS 1505 (1576)
Q Consensus 1430 ~~i~ald~D~~~~~vYWsD~----~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~ 1505 (1576)
..+..+.| +..+.|+++.. ....|+..++.+.....+...... ..+.....+++..-++ ++|+... .
T Consensus 287 ~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~----~~~~~~~~~~~spdg~-~~~~~~~-~-- 357 (741)
T 2ecf_A 287 IYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSP----TWVPLHNSLRFLDDGS-ILWSSER-T-- 357 (741)
T ss_dssp EEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECS----SCCCCCSCCEECTTSC-EEEEECT-T--
T ss_pred eEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCC----CcCCcCCceEECCCCe-EEEEecC-C--
Confidence 45677888 88888887643 234566655543322221110000 0011235677776655 7777542 1
Q ss_pred CCCCeEEEEEcCCCceEEEeeCCCCCceEE-EEecCCCeEEEEecCC---CCcEEEeecCCCCcEEE
Q psy948 1506 KPKGKVMVAHNDGRYRRSLVSENLESPSSI-ALDPTLGKMFWAETGA---SPRIESAWMDGSHRSAT 1568 (1576)
Q Consensus 1506 ~~~~~I~v~~ldG~~~~~lv~~~l~~P~~I-avDp~~G~LYWTD~g~---~~~Iera~mDGs~r~~i 1568 (1576)
...+|.+.+++|+ .+.|. ..-....++ +++|..++||++-... ..+|++..++|...+.|
T Consensus 358 -g~~~l~~~~~~~~-~~~l~-~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l 421 (741)
T 2ecf_A 358 -GFQHLYRIDSKGK-AAALT-HGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRL 421 (741)
T ss_dssp -SSCEEEEECSSSC-EEESC-CSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEEC
T ss_pred -CccEEEEEcCCCC-eeeee-ecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeec
Confidence 1357888888787 44443 333345566 5999988998876533 44799999888755544
No 210
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=95.88 E-value=0.8 Score=50.94 Aligned_cols=112 Identities=16% Similarity=0.083 Sum_probs=74.2
Q ss_pred ceEEEeCCcceEEEecCCC-cCeEEEEecCCCCcEEEEeccCCCCCcceEEEeccCCeEEEEcCCCCeEEEEeCCCCceE
Q psy948 1198 RGITLHPGIGYVYFSSWNL-QAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKH 1276 (1576)
Q Consensus 1198 ~~iavdP~~g~lywtd~g~-~~~I~ra~mdGs~~~~iv~~~~~l~~P~gLaiD~~~~rlYw~D~~~~~I~s~~~dG~~r~ 1276 (1576)
.||++++ +.||.+.-.. ...|.+.++.-......+. .-..+.|..|...+++||.+.-+.+.+...+...-...
T Consensus 24 qGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~---l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~ 98 (243)
T 3mbr_X 24 EGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAE---VPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPR 98 (243)
T ss_dssp EEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEE---CCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEE
T ss_pred ccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEe---CCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEE
Confidence 3778876 7888876432 3577777775333222222 12345555555568999999999999999998654333
Q ss_pred EEEeCCCccceeEEeeeCCeEEEeccCCCcceeeccccccc
Q psy948 1277 IVISGQKVPHVFALTLFEDHIYWTDWNTKSINRADKFNARE 1317 (1576)
Q Consensus 1277 ~v~~~~~~~~P~~lavfed~lYwtd~~~~~i~~~~k~~~~~ 1317 (1576)
.-+.. -..+++|+-.++.||.+|. +..|..++.-+.+.
T Consensus 99 ~ti~~--~~~Gwglt~dg~~L~vSdg-s~~l~~iDp~t~~~ 136 (243)
T 3mbr_X 99 ARFRY--PGEGWALTSDDSHLYMSDG-TAVIRKLDPDTLQQ 136 (243)
T ss_dssp EEEEC--SSCCCEEEECSSCEEEECS-SSEEEEECTTTCCE
T ss_pred EEEeC--CCCceEEeeCCCEEEEECC-CCeEEEEeCCCCeE
Confidence 22222 2368999999999999995 77788887665443
No 211
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=95.88 E-value=0.0026 Score=73.32 Aligned_cols=41 Identities=27% Similarity=0.613 Sum_probs=33.4
Q ss_pred cCccccccCCCcccccceeCCCeeeeecCCCcccCCCCccc
Q psy948 1076 NVDECAKVETNQCGHKCVDTLTGYYCECNTGYNDDDIGTVS 1116 (1576)
Q Consensus 1076 didEC~~~~~~~Csq~C~Nt~Gsy~C~C~~Gy~l~~~~~~~ 1116 (1576)
++|||...++++|+|.|+|+.|+|+|+|++||.|..++..+
T Consensus 1 ~~~eC~~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~d~~sC 41 (283)
T 3f1s_B 1 AKNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQC 41 (283)
T ss_dssp --CCCCSSCSSSCSSBCCCCTTSCCCBCCTTEEECTTSSCE
T ss_pred CCCccCCCCCCCCCCEeeCCCCCeEecCCCCcccCCCCCcc
Confidence 37999862279999999999999999999999997665443
No 212
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=95.88 E-value=0.0033 Score=66.61 Aligned_cols=40 Identities=33% Similarity=0.881 Sum_probs=32.9
Q ss_pred cCccccccCCCc---ccccceeCCCeeeeecCCCcccCCCCccc
Q psy948 1076 NVDECAKVETNQ---CGHKCVDTLTGYYCECNTGYNDDDIGTVS 1116 (1576)
Q Consensus 1076 didEC~~~~~~~---Csq~C~Nt~Gsy~C~C~~Gy~l~~~~~~~ 1116 (1576)
+++||.. .++. |+|.|+|+.|+|+|+|++||.|..++..+
T Consensus 123 di~eC~~-~~~~~~~C~~~C~n~~g~~~C~C~~Gy~l~~d~~~C 165 (170)
T 1szb_A 123 DIDECQV-APGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTC 165 (170)
T ss_dssp ECCTTCC-CTTSCCSSSSEEEEETTEEEEECCTTEEECTTSSCE
T ss_pred ccCcccC-CCCCCCccCCccccCCCCEEEeCCCCcEECCCCCcc
Confidence 5899985 3443 99999999999999999999987665544
No 213
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.85 E-value=0.034 Score=65.89 Aligned_cols=101 Identities=11% Similarity=0.002 Sum_probs=69.1
Q ss_pred cccceeeecccCCcEEEEeec-----------------ccceeEEEeecccccceeeecccceeeeeccCCcceeeecCC
Q psy948 1429 ERRIEALDIDPVDEIIYWVDS-----------------YDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWI 1491 (1576)
Q Consensus 1429 ~~~i~ald~D~~~~~vYWsD~-----------------~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv 1491 (1576)
..++..+++++. +++|.++. ..+.|+|.... + ..++..++..|.|||+++.
T Consensus 164 ~~~pND~~v~~~-G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~-----~------~~~~~~~l~~pNGia~spD 231 (355)
T 3sre_A 164 LPSVNDIVAVGP-EHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN-----D------VRVVAEGFDFANGINISPD 231 (355)
T ss_dssp CSSEEEEEEEET-TEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT-----C------CEEEEEEESSEEEEEECTT
T ss_pred CCCCceEEEeCC-CCEEecCCcEeCCcccccchhhccCCccEEEEEECC-----e------EEEeecCCcccCcceECCC
Confidence 345777888764 56665543 23567765431 1 1233567789999999999
Q ss_pred CCeEEEeecCCCCCCCCCeEEEEEcC--CCce-EEEeeCCCCCceEEEEecCCCeEEEEe
Q psy948 1492 AHNIYWTVSDRSGSKPKGKVMVAHND--GRYR-RSLVSENLESPSSIALDPTLGKMFWAE 1548 (1576)
Q Consensus 1492 ~~nLYWTD~~~~~~~~~~~I~v~~ld--G~~~-~~lv~~~l~~P~~IavDp~~G~LYWTD 1548 (1576)
.+.||++|+. .++|.+..++ |+.. +.++. -...|-+|+||+++|.||.+.
T Consensus 232 g~~lYvadt~------~~~I~~~~~~~~g~l~~~~~~~-~~g~PDGi~vD~e~G~lwva~ 284 (355)
T 3sre_A 232 GKYVYIAELL------AHKIHVYEKHANWTLTPLRVLS-FDTLVDNISVDPVTGDLWVGC 284 (355)
T ss_dssp SSEEEEEEGG------GTEEEEEEECTTSCEEEEEEEE-CSSEEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEeCC------CCeEEEEEECCCCcEecCEEEe-CCCCCceEEEeCCCCcEEEEe
Confidence 9999999986 5789999886 4321 12332 346799999998779988855
No 214
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=95.84 E-value=0.83 Score=50.77 Aligned_cols=94 Identities=10% Similarity=0.057 Sum_probs=55.7
Q ss_pred CeEEEEeccCCceEecccccCCcceEEEeCCcceEEEecCCCcCeEEEEecCC-CCcEEEEeccCCCCCcceEEEeccCC
Q psy948 1175 IKLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDG-SNFTRILTHEDDIAWPNALTLDYFTE 1253 (1576)
Q Consensus 1175 ~~I~v~~ldG~~r~~l~~~l~~P~~iavdP~~g~lywtd~g~~~~I~ra~mdG-s~~~~iv~~~~~l~~P~gLaiD~~~~ 1253 (1576)
.+|.+.++.+...+.+...-....++++.|...+|++.. ...|...++++ .....+... .....+..+++....+
T Consensus 22 ~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~---~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~spdg~ 97 (297)
T 2ojh_A 22 SSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNS---EGLLYRLSLAGDPSPEKVDTG-FATICNNDHGISPDGA 97 (297)
T ss_dssp EEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEE---TTEEEEEESSSCCSCEECCCT-TCCCBCSCCEECTTSS
T ss_pred eeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEc---CCeEEEEeCCCCCCceEeccc-cccccccceEECCCCC
Confidence 445555555444444443345577899999988888865 34788888877 554443321 1224456677777777
Q ss_pred eEEEEcCC---CCeEEEEeCCC
Q psy948 1254 RLYWADAH---LDYIASVDLDG 1272 (1576)
Q Consensus 1254 rlYw~D~~---~~~I~s~~~dG 1272 (1576)
+|+++... ...|..+++.+
T Consensus 98 ~l~~~~~~~~~~~~l~~~~~~~ 119 (297)
T 2ojh_A 98 LYAISDKVEFGKSAIYLLPSTG 119 (297)
T ss_dssp EEEEEECTTTSSCEEEEEETTC
T ss_pred EEEEEEeCCCCcceEEEEECCC
Confidence 77776532 33444444443
No 215
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=95.78 E-value=0.062 Score=62.46 Aligned_cols=136 Identities=15% Similarity=0.060 Sum_probs=86.5
Q ss_pred ccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceee--eeccCCcceeee---cCCCCeEEE-eecCCC
Q psy948 1430 RRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLG--IKSIGKLTAIAV---DWIAHNIYW-TVSDRS 1503 (1576)
Q Consensus 1430 ~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~--~~~~~~p~glAV---Dwv~~nLYW-TD~~~~ 1503 (1576)
--+.+++||...+++|.++...++|.++...+.....+. .. .+. -.....|.||.+ |.- +.|+. ++.+..
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~--~~-~~s~~g~~~~~~sGl~~~~~D~~-grL~vv~~~~~a 88 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVV--ID-GASSNGDGEQQMSGLSLLTHDNS-KRLFAVMKNAKS 88 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEEC--CT-TTCCSSCCSEEEEEEEESSSSSC-CEEEEEEEETTT
T ss_pred cCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEe--cC-CccccCCCcceeeEEEEeccCCC-CcEEEEEccccc
Confidence 346789999999999999999999998876533222211 00 000 011225689999 676 66655 442110
Q ss_pred ----C--CCCCCeEEEEEcC----CCceEEE-ee----C-------CCCCceEEEEecCCCeEEEEecCCCCcEEEeecC
Q psy948 1504 ----G--SKPKGKVMVAHND----GRYRRSL-VS----E-------NLESPSSIALDPTLGKMFWAETGASPRIESAWMD 1561 (1576)
Q Consensus 1504 ----~--~~~~~~I~v~~ld----G~~~~~l-v~----~-------~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~mD 1561 (1576)
+ ......+.+.+|+ |+....+ +. . ....|..||||+ .|..|.|+....+.|.|.+-|
T Consensus 89 f~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~-~GnaYVt~s~~~~~I~rV~pd 167 (334)
T 2p9w_A 89 FNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR-DGNSYVAFALGMPAIARVSAD 167 (334)
T ss_dssp TCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECT-TSCEEEEEEESSCEEEEECTT
T ss_pred ccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECC-CCCEEEeCCCCCCeEEEEeCC
Confidence 0 0124678888988 4422211 11 1 223488999997 699999997653689999999
Q ss_pred CCCcEEEEe
Q psy948 1562 GSHRSATQI 1570 (1576)
Q Consensus 1562 Gs~r~~i~~ 1570 (1576)
|+...++..
T Consensus 168 G~~~~~~~~ 176 (334)
T 2p9w_A 168 GKTVSTFAW 176 (334)
T ss_dssp SCCEEEEEE
T ss_pred CCEEeeeee
Confidence 997666653
No 216
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=95.68 E-value=0.0044 Score=71.44 Aligned_cols=42 Identities=26% Similarity=0.715 Sum_probs=35.8
Q ss_pred CCCCccCC-CCccccccccCCCceEEEcCCCcEecCCCCCceec
Q psy948 1355 DVDECATG-IHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKA 1397 (1576)
Q Consensus 1355 d~neC~~~-~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~ 1397 (1576)
+.|||..+ |++|+|.|+|+.++|+|.|+.||.|..+.. +|..
T Consensus 1 ~~~eC~~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~d~~-sC~p 43 (283)
T 3f1s_B 1 AKNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHK-QCVP 43 (283)
T ss_dssp --CCCCSSCSSSCSSBCCCCTTSCCCBCCTTEEECTTSS-CEEE
T ss_pred CCCccCCCCCCCCCCEeeCCCCCeEecCCCCcccCCCCC-cccc
Confidence 36899988 899999999999999999999999985543 6886
No 217
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=95.68 E-value=0.0049 Score=64.40 Aligned_cols=41 Identities=27% Similarity=0.673 Sum_probs=33.5
Q ss_pred cCccccccCCCcccccceeCCCeeeeecCCCcccCCCCccc
Q psy948 1076 NVDECAKVETNQCGHKCVDTLTGYYCECNTGYNDDDIGTVS 1116 (1576)
Q Consensus 1076 didEC~~~~~~~Csq~C~Nt~Gsy~C~C~~Gy~l~~~~~~~ 1116 (1576)
++|||.....+.|+|.|+|++|+|+|+|.+||.|..++..+
T Consensus 116 d~~eC~~~~~~~C~~~C~n~~g~~~C~C~~Gy~l~~~~~~C 156 (159)
T 1nzi_A 116 DINECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNC 156 (159)
T ss_dssp ECCTTTC-CCCCSSSEEEEETTEEEEECCTTCEECTTSSCE
T ss_pred cCcccCCCCCCCCCCcccCcCCCEEEecCCCcEECCCCCcc
Confidence 58999864346899999999999999999999987655443
No 218
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=95.67 E-value=0.0041 Score=61.25 Aligned_cols=39 Identities=23% Similarity=0.526 Sum_probs=32.8
Q ss_pred CccccccCCCcccccceeCCCeeeeecCCCcccCCCCccc
Q psy948 1077 VDECAKVETNQCGHKCVDTLTGYYCECNTGYNDDDIGTVS 1116 (1576)
Q Consensus 1077 idEC~~~~~~~Csq~C~Nt~Gsy~C~C~~Gy~l~~~~~~~ 1116 (1576)
++||+. .+++|.|.|+|+.|+|+|.|++||.|...+..+
T Consensus 54 ~~~C~~-~~~~C~~~C~n~~g~y~C~C~~G~~~~~~g~~C 92 (114)
T 1aut_L 54 FLNCSL-DNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQC 92 (114)
T ss_dssp SSSSSS-GGGGCSSEEEECSSSEEEECCTTEEECTTSSCE
T ss_pred CCcCcC-CCCCCCCEeECCCCCEEeECCCCeeECCCCCcc
Confidence 468985 468999999999999999999999987655443
No 219
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=95.55 E-value=0.63 Score=55.37 Aligned_cols=118 Identities=10% Similarity=0.023 Sum_probs=64.8
Q ss_pred ccCCcEEEEeecccceeEEEeecccccceeeecccce--eeeeccCCcce---eeecCCCCeEEEeec-C-CC-CCCCCC
Q psy948 1438 DPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQD--LGIKSIGKLTA---IAVDWIAHNIYWTVS-D-RS-GSKPKG 1509 (1576)
Q Consensus 1438 D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~--~~~~~~~~p~g---lAVDwv~~nLYWTD~-~-~~-~~~~~~ 1509 (1576)
.+..+++||+.. +.++.+++.+.. .+++...... ........|.| ++++.-.+.||.+.. . +. -.. .+
T Consensus 219 ~~~~~~~~~vs~--~~V~viD~~~~~-~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~-~~ 294 (368)
T 1mda_H 219 ANYPGMLVWAVA--SSILQGDIPAAG-ATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAA-AE 294 (368)
T ss_dssp ETTTTEEEECBS--SCCEEEECCSSC-CEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSC-EE
T ss_pred cccCCEEEEEcC--CEEEEEECCCCc-ceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCccccc-CC
Confidence 344677888776 777766654321 1121111000 00011224555 899999999998754 1 10 000 02
Q ss_pred eEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEec-CCCCcEEEeecC
Q psy948 1510 KVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAET-GASPRIESAWMD 1561 (1576)
Q Consensus 1510 ~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~-g~~~~Iera~mD 1561 (1576)
.+.|.++.......-|..+ ..|.+|++.|...+||.+.. +.+ .|...++.
T Consensus 295 ~~~ViD~~t~~vv~~i~vg-~~p~gi~~s~Dg~~l~va~~~~~~-~VsVID~~ 345 (368)
T 1mda_H 295 NTSSVTASVGQTSGPISNG-HDSDAIIAAQDGASDNYANSAGTE-VLDIYDAA 345 (368)
T ss_dssp EEEEEESSSCCEEECCEEE-EEECEEEECCSSSCEEEEEETTTT-EEEEEESS
T ss_pred CEEEEECCCCeEEEEEECC-CCcceEEECCCCCEEEEEccCCCC-eEEEEECC
Confidence 3447777654322222111 26999999998888999987 443 67666654
No 220
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=95.53 E-value=0.0053 Score=82.03 Aligned_cols=37 Identities=41% Similarity=1.137 Sum_probs=31.8
Q ss_pred CCCCCceecCCCeEEeCcccCCCCCCCCCCCCCCCccc
Q psy948 548 QCSESEFQCKNGKCIPAQWRCDHDEDCTDGSDEMECGG 585 (1576)
Q Consensus 548 ~C~~~~f~C~~g~Ci~~~~~CDg~~DC~dgsDE~~C~~ 585 (1576)
.|. .+|+|.+|+||+..|+|||..||.|+|||.+|..
T Consensus 118 ~C~-~~F~C~~g~ci~~~~~c~g~~dC~d~sde~~C~~ 154 (913)
T 3t5o_A 118 DCK-NKFRCDSGRCIARKLECNGENDCGDNSDERDCGR 154 (913)
T ss_dssp CCS-SEEECTTSCEEEGGGSSSSSCCSSSSGGGTTCSS
T ss_pred Ccc-cccccCCCceEccceecCCcccCCCccccccCCC
Confidence 353 6799999999999999999999999999998864
No 221
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=95.49 E-value=0.4 Score=56.20 Aligned_cols=110 Identities=15% Similarity=0.082 Sum_probs=68.1
Q ss_pred EEEEeecc--cceeEEEeecccccceeeecccce-eeeeccCCcceeee--cCCCCe--EEEeecCCCCCCCCCeEEEEE
Q psy948 1443 IIYWVDSY--DRNIRRSFMLEAQKGQVQAGFGQD-LGIKSIGKLTAIAV--DWIAHN--IYWTVSDRSGSKPKGKVMVAH 1515 (1576)
Q Consensus 1443 ~vYWsD~~--~~~I~r~~l~~~~~~~v~~~~~~~-~~~~~~~~p~glAV--Dwv~~n--LYWTD~~~~~~~~~~~I~v~~ 1515 (1576)
.+|-++.. .++|.-..++... .++....... -+.+.+..|.||++ +..++. +|-++. .++++...
T Consensus 88 la~as~R~~~~n~l~vf~iDp~~-~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k-------~G~~~q~~ 159 (355)
T 3amr_A 88 IAAASNRSEGKNTIEIYAIDGKN-GTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGK-------EGEFEQYE 159 (355)
T ss_dssp EEEEEECSTTCCEEEEEEECTTT-CCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECS-------SSEEEEEE
T ss_pred EEEEeCCCCCCCeEEEEEECCCC-CceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECC-------CCeEEEEE
Confidence 45777776 6777555454222 1222111100 01234578999999 887775 555554 25666644
Q ss_pred c----CCCceEEEee--CCCCCceEEEEecCCCeEEEEecCCCCcEEEeecCC
Q psy948 1516 N----DGRYRRSLVS--ENLESPSSIALDPTLGKMFWAETGASPRIESAWMDG 1562 (1576)
Q Consensus 1516 l----dG~~~~~lv~--~~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~mDG 1562 (1576)
| +|+....+|. ..-.+|-++++|+..|+||..++.. .|+|...+.
T Consensus 160 l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd~--GIw~~da~p 210 (355)
T 3amr_A 160 LKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEEDE--AIWKFSAEP 210 (355)
T ss_dssp EEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEETTT--EEEEEECST
T ss_pred EEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEecccc--eEEEEeCCc
Confidence 4 4444445553 2336899999999999999999873 499999663
No 222
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=95.29 E-value=0.46 Score=59.50 Aligned_cols=275 Identities=11% Similarity=0.023 Sum_probs=151.9
Q ss_pred CcceEEEecCCCcCeEEEEecCCCCcEEEEeccCCCCCcceEEEe--ccCCeEEEEc-----------------CCCCeE
Q psy948 1205 GIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLD--YFTERLYWAD-----------------AHLDYI 1265 (1576)
Q Consensus 1205 ~~g~lywtd~g~~~~I~ra~mdGs~~~~iv~~~~~l~~P~gLaiD--~~~~rlYw~D-----------------~~~~~I 1265 (1576)
..++||.++.. +.+|.|..++-.....|+.. ....-|.||++. ..+++||.+. ...+.+
T Consensus 100 DG~~lfVnd~~-~~rVavIdl~t~~~~~ii~i-p~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~v 177 (595)
T 1fwx_A 100 DGRFLFMNDKA-NTRVARVRCDVMKCDAILEI-PNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVF 177 (595)
T ss_dssp EEEEEEEEETT-TTEEEEEETTTTEEEEEEEC-SSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEE
T ss_pred CCCEEEEEcCC-CCEEEEEECCCceEeeEEeC-CCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceE
Confidence 45688887754 56899999888766666653 345679999984 6778999884 333577
Q ss_pred EEEeCCCCceEEEEeCCCccceeEEee--eCCeEEEeccCCCcceeeccccccccccceecccccccCCCcceeeccCCc
Q psy948 1266 ASVDLDGKHKHIVISGQKVPHVFALTL--FEDHIYWTDWNTKSINRADKFNAREIQAGILHHCMNITGGSGYLCTCYQGF 1343 (1576)
Q Consensus 1266 ~s~~~dG~~r~~v~~~~~~~~P~~lav--fed~lYwtd~~~~~i~~~~k~~~~~~~~~~~~~c~n~~g~~~~~C~C~~G~ 1343 (1576)
..++.+.. +++.+-.--..|-++++ .+.++|.|...+....-++.-+.+....... .+.+.. .
T Consensus 178 tvID~~t~--~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V---~~~~~~----------~ 242 (595)
T 1fwx_A 178 TAVDADKW--EVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVV---FNIAEI----------E 242 (595)
T ss_dssp EEEETTTT--EEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEE---EEHHHH----------H
T ss_pred EEEECCCC--eEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEE---eeccce----------e
Confidence 77777743 33221000014666665 6789999987765543333222211110000 000000 0
Q ss_pred eeccCCCccccCCCCccCCCCccccccccCCCceEEEcCCCcEecCCCCCceeccCCceEEEEecCCceeeecccccccc
Q psy948 1344 IIDKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKANDNKLTIVYSNGPEIRAYETHKRRFR 1423 (1576)
Q Consensus 1344 ~~~~~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~~~~~~ll~s~~~~Ir~i~~~~~~~~ 1423 (1576)
.. ..+|+. ... ....++...... ...+.
T Consensus 243 ~~-----------------------------------------v~~Gk~---~~i-~~V~VID~~~~~-------~~~~~ 270 (595)
T 1fwx_A 243 KA-----------------------------------------IAAGDY---QEL-NGVKVVDGRKEA-------SSLFT 270 (595)
T ss_dssp HH-----------------------------------------HHHTCS---EEE-TTEEEEECSGGG-------CCSSE
T ss_pred Ee-----------------------------------------ccCCCe---eEE-CcEEEEeCcccC-------CceeE
Confidence 00 001110 000 012222222100 00111
Q ss_pred ccccccccceeeecccCCcEEEEeecccceeEEEeeccccc---ceeeecccceeeeeccCCcceeeecCCCCeEEEeec
Q psy948 1424 DVISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQK---GQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVS 1500 (1576)
Q Consensus 1424 ~~v~~~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~---~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~ 1500 (1576)
..+.....+.++++.+..++||.++....+|...++..... +++.........+.-...|.++|+|..+ ++|-+..
T Consensus 271 ~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG-~aY~t~~ 349 (595)
T 1fwx_A 271 RYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRG-NAYTSLF 349 (595)
T ss_dssp EEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTS-EEEEEET
T ss_pred EEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCC-eEEEEEe
Confidence 12333457889999999999999999999998777663210 0010000000112223479999999977 9998876
Q ss_pred CCCCCCCCCeEEEEEcCCC--------ceEEEee-CCCCCc------eEEEEecCCCeEEEEecCCCCcE
Q psy948 1501 DRSGSKPKGKVMVAHNDGR--------YRRSLVS-ENLESP------SSIALDPTLGKMFWAETGASPRI 1555 (1576)
Q Consensus 1501 ~~~~~~~~~~I~v~~ldG~--------~~~~lv~-~~l~~P------~~IavDp~~G~LYWTD~g~~~~I 1555 (1576)
- .++|.+.+++.. ...+|-+ .--.+| .++++.|.-.|||-+..++.-++
T Consensus 350 l------dsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~ 413 (595)
T 1fwx_A 350 L------DSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRF 413 (595)
T ss_dssp T------TTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSS
T ss_pred c------CCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCcccc
Confidence 3 578888887651 1233322 222456 67788899999999987663344
No 223
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=95.27 E-value=0.014 Score=68.40 Aligned_cols=40 Identities=28% Similarity=0.627 Sum_probs=33.4
Q ss_pred cCccccccCCCcccccceeCCCeeeeecCCCcccCCCCcc
Q psy948 1076 NVDECAKVETNQCGHKCVDTLTGYYCECNTGYNDDDIGTV 1115 (1576)
Q Consensus 1076 didEC~~~~~~~Csq~C~Nt~Gsy~C~C~~Gy~l~~~~~~ 1115 (1576)
|||||....+++|.+.|+|+.|+|+|.|++||.+......
T Consensus 42 ~~~eC~~~~~~~C~~~C~~~~g~~~C~C~~g~~~~~~~~~ 81 (317)
T 3h5c_B 42 AKNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQ 81 (317)
T ss_dssp CSSSCCTTCTTSCSSEEECCSSSCEEECCTTEECCTTSSC
T ss_pred CcccCCCCCCCCCcCccccCCCeeEEeccccccccccccc
Confidence 6999984224899999999999999999999998765443
No 224
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=95.24 E-value=0.0082 Score=80.23 Aligned_cols=36 Identities=42% Similarity=1.110 Sum_probs=32.8
Q ss_pred CCCCCeEeeCCCCeecCCCCCCCcCCCCCCCCccCCC
Q psy948 340 QCRAGSFQCDNGNCTPSASICDGVDDCRDGSDEKHCD 376 (1576)
Q Consensus 340 ~C~~~~f~C~~g~Ci~~~~~CDg~~dC~dgsDE~~C~ 376 (1576)
.|. .+|+|.+|+||+..|+|||.+||.|+|||.+|.
T Consensus 118 ~C~-~~F~C~~g~ci~~~~~c~g~~dC~d~sde~~C~ 153 (913)
T 3t5o_A 118 DCK-NKFRCDSGRCIARKLECNGENDCGDNSDERDCG 153 (913)
T ss_dssp CCS-SEEECTTSCEEEGGGSSSSSCCSSSSGGGTTCS
T ss_pred Ccc-cccccCCCceEccceecCCcccCCCccccccCC
Confidence 354 789999999999999999999999999999886
No 225
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=95.09 E-value=0.16 Score=62.56 Aligned_cols=116 Identities=13% Similarity=0.111 Sum_probs=75.4
Q ss_pred ccceeeecccC---CcEEEEeecc------------cceeEEEeeccccc-------ceeeecccceeeeeccCCcceee
Q psy948 1430 RRIEALDIDPV---DEIIYWVDSY------------DRNIRRSFMLEAQK-------GQVQAGFGQDLGIKSIGKLTAIA 1487 (1576)
Q Consensus 1430 ~~i~ald~D~~---~~~vYWsD~~------------~~~I~r~~l~~~~~-------~~v~~~~~~~~~~~~~~~p~glA 1487 (1576)
.-+.+|++++. ++.||++... ..+|.|..+..... .+++... ......+....|+
T Consensus 69 ~Gllgia~~P~f~~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~---~~~~~~H~g~~l~ 145 (463)
T 2wg3_C 69 RGLLSLAFHPNYKKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEV---AELHRKHLGGQLL 145 (463)
T ss_dssp CSEEEEEECTTHHHHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEE---EESSSSSCEEEEE
T ss_pred CcceeeEeCCCCcCCCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEc---CCCCCcccCCcEe
Confidence 44667888885 6788876442 13677777754211 1111100 0012245566899
Q ss_pred ecCCCCeEEEeecCCC-----------CCCCCCeEEEEEcCCCc-------------------eEEEeeCCCCCceEEEE
Q psy948 1488 VDWIAHNIYWTVSDRS-----------GSKPKGKVMVAHNDGRY-------------------RRSLVSENLESPSSIAL 1537 (1576)
Q Consensus 1488 VDwv~~nLYWTD~~~~-----------~~~~~~~I~v~~ldG~~-------------------~~~lv~~~l~~P~~Iav 1537 (1576)
++. .++||++-.++. .....++|.+.++||+. +..|.+.++.+|.+||+
T Consensus 146 fgp-DG~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~ 224 (463)
T 2wg3_C 146 FGP-DGFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAV 224 (463)
T ss_dssp ECT-TSCEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEE
T ss_pred ECC-CCcEEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEE
Confidence 997 569999954432 12346899999999941 34577789999999999
Q ss_pred ecCCC------eEEEEec
Q psy948 1538 DPTLG------KMFWAET 1549 (1576)
Q Consensus 1538 Dp~~G------~LYWTD~ 1549 (1576)
||..| +||-+|.
T Consensus 225 dp~tg~~~G~l~~~~~D~ 242 (463)
T 2wg3_C 225 DRHPTDININLTILCSDS 242 (463)
T ss_dssp ESSCSSTTCSEEEEEECC
T ss_pred CCCCCCcccceEEEeccc
Confidence 99865 7888886
No 226
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=95.07 E-value=4.4 Score=51.02 Aligned_cols=100 Identities=9% Similarity=-0.070 Sum_probs=59.2
Q ss_pred cceEEEecCCCcCeEEEEecCCCCcEEEEeccCCCCCcceEEEeccCCeEEEEcCCCCeEEEEeCC-CCceEEEEeCCCc
Q psy948 1206 IGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLD-GKHKHIVISGQKV 1284 (1576)
Q Consensus 1206 ~g~lywtd~g~~~~I~ra~mdGs~~~~iv~~~~~l~~P~gLaiD~~~~rlYw~D~~~~~I~s~~~d-G~~r~~v~~~~~~ 1284 (1576)
.+++|.+..+ ...|...+++.......+. .-..|.++++....++||.+.. ...|..+++. .+.+. +..-...
T Consensus 166 ~~~~~V~~~~-~~~V~viD~~t~~v~~~i~---~g~~p~~v~~SpDGr~lyv~~~-dg~V~viD~~~~t~~~-v~~i~~G 239 (567)
T 1qks_A 166 ENLFSVTLRD-AGQIALIDGSTYEIKTVLD---TGYAVHISRLSASGRYLFVIGR-DGKVNMIDLWMKEPTT-VAEIKIG 239 (567)
T ss_dssp GGEEEEEETT-TTEEEEEETTTCCEEEEEE---CSSCEEEEEECTTSCEEEEEET-TSEEEEEETTSSSCCE-EEEEECC
T ss_pred CceEEEEeCC-CCeEEEEECCCCeEEEEEe---CCCCccceEECCCCCEEEEEcC-CCeEEEEECCCCCCcE-eEEEecC
Confidence 3456666543 3345555444322222222 2346889999999999999874 5689999985 33222 2211123
Q ss_pred cceeEEeee------CCeEEEeccCCCcceeec
Q psy948 1285 PHVFALTLF------EDHIYWTDWNTKSINRAD 1311 (1576)
Q Consensus 1285 ~~P~~lavf------ed~lYwtd~~~~~i~~~~ 1311 (1576)
..|.+|++. +.++|.++.....|..++
T Consensus 240 ~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD 272 (567)
T 1qks_A 240 SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMD 272 (567)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEE
T ss_pred CCCceeEEccccCCCCCEEEEEEccCCeEEEEE
Confidence 468888876 458888877666665554
No 227
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=95.07 E-value=0.011 Score=61.84 Aligned_cols=52 Identities=33% Similarity=0.678 Sum_probs=39.6
Q ss_pred CCceeccCCCccccCCCCccCC-CCccccccccCCCceEEEcCCCcEecCCCCCceec
Q psy948 1341 QGFIIDKNNAKKCLDVDECATG-IHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKA 1397 (1576)
Q Consensus 1341 ~G~~~~~~~~~~c~d~neC~~~-~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~ 1397 (1576)
.||.+. ..+.+++||... ++.|+|.|+|.+|+|+|.|++||.|..+.+ +|++
T Consensus 106 ~GF~~~----y~~~d~~eC~~~~~~~C~~~C~n~~g~~~C~C~~Gy~l~~~~~-~C~~ 158 (159)
T 1nzi_A 106 TGFAAY----YVATDINECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMK-NCGV 158 (159)
T ss_dssp CEEEEE----EEEEECCTTTC-CCCCSSSEEEEETTEEEEECCTTCEECTTSS-CEEC
T ss_pred ccceee----eecccCcccCCCCCCCCCCcccCcCCCEEEecCCCcEECCCCC-cccc
Confidence 456553 345678999864 468999999999999999999999975443 6863
No 228
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=95.06 E-value=0.0076 Score=61.12 Aligned_cols=38 Identities=24% Similarity=0.644 Sum_probs=31.9
Q ss_pred C-ccccccCCCcccccceeCCCeeeeecCCCcccCCCCcc
Q psy948 1077 V-DECAKVETNQCGHKCVDTLTGYYCECNTGYNDDDIGTV 1115 (1576)
Q Consensus 1077 i-dEC~~~~~~~Csq~C~Nt~Gsy~C~C~~Gy~l~~~~~~ 1115 (1576)
| |||.. .+++|.+.|+|+.|+|+|.|++||.|..++..
T Consensus 80 i~d~C~~-~~~~C~~~C~~~~g~y~C~C~~Gy~l~~~g~~ 118 (134)
T 2vh0_B 80 TRKLCSL-DNGDCDQFCHEEQNSVVCSCARGYTLADNGKA 118 (134)
T ss_dssp -CCGGGT-GGGGCSSEEEEETTEEEEECCTTEEECTTSSC
T ss_pred CCCcccc-CCCCCCCEeECCCCCEEEECCCCcEECCCCCc
Confidence 6 89985 46789999999999999999999998765544
No 229
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=94.85 E-value=0.0061 Score=68.73 Aligned_cols=38 Identities=29% Similarity=0.730 Sum_probs=29.4
Q ss_pred cCccccccCCCcccc--cceeCCCeeeeecCCCcccCCCCc
Q psy948 1076 NVDECAKVETNQCGH--KCVDTLTGYYCECNTGYNDDDIGT 1114 (1576)
Q Consensus 1076 didEC~~~~~~~Csq--~C~Nt~Gsy~C~C~~Gy~l~~~~~ 1114 (1576)
|||||+. ..+.|++ .|+|+.|||+|.|.+||.++...+
T Consensus 4 DiDEC~~-~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~~C 43 (285)
T 1gl4_A 4 AQQTCAN-NRHQCSVHAECRDYATGFCCRCVANYTGNGRQC 43 (285)
T ss_dssp ---CHHH-HGGGSCTTEEEEECSSCEEEEECTTEEECSSSE
T ss_pred cchhccC-CCCCCCCCCEeEcCCCCeEEEcCCCCCCCCCcC
Confidence 5999986 4688975 799999999999999999765443
No 230
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=94.74 E-value=0.41 Score=56.14 Aligned_cols=141 Identities=17% Similarity=0.227 Sum_probs=91.9
Q ss_pred eEEecC--CCeEEEEeccCCce--Eec-------ccccCCcceEEE--eCCcc--eEEEecCCCcCeEEEEec----CCC
Q psy948 1168 CALDVR--SIKLDVAELDGTNR--KTL-------KTAIQDPRGITL--HPGIG--YVYFSSWNLQAYIGKIGM----DGS 1228 (1576)
Q Consensus 1168 ~avD~~--~~~I~v~~ldG~~r--~~l-------~~~l~~P~~iav--dP~~g--~lywtd~g~~~~I~ra~m----dGs 1228 (1576)
++.+-. ..+|.+..+|.... +.+ .+.+..|.+|++ +|..| |+|.++-. .+++.-.+ +|.
T Consensus 90 ~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~--G~~~q~~l~~~~~g~ 167 (355)
T 3amr_A 90 AASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKE--GEFEQYELKADKNGY 167 (355)
T ss_dssp EEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSS--SEEEEEEEEECTTSC
T ss_pred EEeCCCCCCCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCC--CeEEEEEEEeCCCCc
Confidence 566666 78899998874332 222 145688999999 88777 56666543 34444222 343
Q ss_pred CcEEEEeccCCCCCcceEEEeccCCeEEEEcCCCCeEEEEeCCCC---ceEEEEe--CCCc-cceeEEeee-C----CeE
Q psy948 1229 NFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGK---HKHIVIS--GQKV-PHVFALTLF-E----DHI 1297 (1576)
Q Consensus 1229 ~~~~iv~~~~~l~~P~gLaiD~~~~rlYw~D~~~~~I~s~~~dG~---~r~~v~~--~~~~-~~P~~lavf-e----d~l 1297 (1576)
-..+++..-..-..|.|+++|..+++||.++.... |..++.+.. .++++.. ...+ ..|-+|+++ . +||
T Consensus 168 ~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd~G-Iw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyL 246 (355)
T 3amr_A 168 ISGKKVRAFKMNSQTEGMAADDEYGRLYIAEEDEA-IWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYL 246 (355)
T ss_dssp EEEEEEEEEECSSCEEEEEEETTTTEEEEEETTTE-EEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEE
T ss_pred ccceEEEEecCCCCcceEEEcCCCCeEEEecccce-EEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEE
Confidence 33344443344568999999999999999999854 999986532 2344332 2333 379999996 3 488
Q ss_pred EEeccCCCcceeec
Q psy948 1298 YWTDWNTKSINRAD 1311 (1576)
Q Consensus 1298 Ywtd~~~~~i~~~~ 1311 (1576)
+.++-...++...+
T Consensus 247 ivSsQG~~s~~Vyd 260 (355)
T 3amr_A 247 MASSQGNSSYAIYD 260 (355)
T ss_dssp EEEEGGGTEEEEEE
T ss_pred EEEcCCCCEEEEEE
Confidence 88887766554444
No 231
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=94.56 E-value=0.31 Score=54.76 Aligned_cols=113 Identities=12% Similarity=0.157 Sum_probs=62.8
Q ss_pred cceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCc-cee-eecCCCCeEEEeecCCCCCCCC
Q psy948 1431 RIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKL-TAI-AVDWIAHNIYWTVSDRSGSKPK 1508 (1576)
Q Consensus 1431 ~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p-~gl-AVDwv~~nLYWTD~~~~~~~~~ 1508 (1576)
..++|.+| .++||-+|. .++|+..+... .++.. .+.+...+.| ..| .+.|+.+.||-.... .
T Consensus 128 eG~glt~d--g~~L~~SdG-s~~i~~iDp~T---~~v~~----~I~V~~~g~~~~~lNELe~~~G~lyan~w~------~ 191 (262)
T 3nol_A 128 EGWGLTHN--DQYLIMSDG-TPVLRFLDPES---LTPVR----TITVTAHGEELPELNELEWVDGEIFANVWQ------T 191 (262)
T ss_dssp CCCCEEEC--SSCEEECCS-SSEEEEECTTT---CSEEE----EEECEETTEECCCEEEEEEETTEEEEEETT------S
T ss_pred CceEEecC--CCEEEEECC-CCeEEEEcCCC---CeEEE----EEEeccCCccccccceeEEECCEEEEEEcc------C
Confidence 44566655 567887774 56676443221 11111 1111111222 221 255678888866543 5
Q ss_pred CeEEEEEcCC-CceEEEeeCC-----------CCCceEEEEecCCCeEEEEecCCCCcEEEeec
Q psy948 1509 GKVMVAHNDG-RYRRSLVSEN-----------LESPSSIALDPTLGKMFWAETGASPRIESAWM 1560 (1576)
Q Consensus 1509 ~~I~v~~ldG-~~~~~lv~~~-----------l~~P~~IavDp~~G~LYWTD~g~~~~Iera~m 1560 (1576)
+.|.|.++.. +-.++|-..+ .+.|.|||+||..++||.|-.. =|++.+..+
T Consensus 192 ~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~-Wp~~~ev~~ 254 (262)
T 3nol_A 192 NKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL-WPKVFEITL 254 (262)
T ss_dssp SEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT-CSEEEEEEE
T ss_pred CeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC-CCceEEEEE
Confidence 6788887743 3333332222 3577999999999999999732 246665544
No 232
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=94.54 E-value=0.017 Score=44.83 Aligned_cols=32 Identities=31% Similarity=0.736 Sum_probs=25.5
Q ss_pred CCCCccCCCCccc--cccccCCCceEEEcCCCcEec
Q psy948 1355 DVDECATGIHHCS--QVCTNLNGTYACSCNAGFTLS 1388 (1576)
Q Consensus 1355 d~neC~~~~~~Cs--~lC~n~~gsy~C~Cp~G~~l~ 1388 (1576)
++++|.. .+|. ..|++..++|+|.||.||++.
T Consensus 2 d~d~C~~--~pC~ngg~C~~~~~~~~C~C~~G~~G~ 35 (39)
T 1edm_B 2 DGDQCES--NPCLNGGSCKDDINSYECWCPFGFEGK 35 (39)
T ss_dssp CCCTTTT--CCCCTTCEEEEETTEEEEECCTTCCST
T ss_pred ccccCCC--CCCCCCCEeEcCCCceEeECCCCCcCC
Confidence 5677864 4564 589999999999999999863
No 233
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=94.53 E-value=0.015 Score=59.60 Aligned_cols=39 Identities=26% Similarity=0.502 Sum_probs=31.1
Q ss_pred Cccc---cccCCCcccccceeCCC-eeeeecCCCcccCCCCccc
Q psy948 1077 VDEC---AKVETNQCGHKCVDTLT-GYYCECNTGYNDDDIGTVS 1116 (1576)
Q Consensus 1077 idEC---~~~~~~~Csq~C~Nt~G-sy~C~C~~Gy~l~~~~~~~ 1116 (1576)
+++| .. .+++|+|.|+|+.| +|+|.|++||.|..++..+
T Consensus 85 ~~~c~~c~~-~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~dG~~C 127 (142)
T 2c4f_L 85 KDDQLICVN-ENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSC 127 (142)
T ss_dssp GGGCCSTTT-GGGGCSSEEECCTTSCCEEECCTTEEECTTSSCE
T ss_pred ccccccccC-CCCCccCEeECCCCCCEEEECCCCceECCCCCCC
Confidence 4664 32 46889999999999 9999999999987665543
No 234
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=94.52 E-value=0.022 Score=58.24 Aligned_cols=61 Identities=21% Similarity=0.568 Sum_probs=38.6
Q ss_pred ccccccCCCcceeeccCCceeccC--------CCccccCCCCccCCCCccc--cccc-------cCCCceEEEcCCCcEe
Q psy948 1325 HCMNITGGSGYLCTCYQGFIIDKN--------NAKKCLDVDECATGIHHCS--QVCT-------NLNGTYACSCNAGFTL 1387 (1576)
Q Consensus 1325 ~c~n~~g~~~~~C~C~~G~~~~~~--------~~~~c~d~neC~~~~~~Cs--~lC~-------n~~gsy~C~Cp~G~~l 1387 (1576)
.|++..+..+|+|.|++||....= ....|.++++|.. ..|. +.|+ ++.++|+|.|++||++
T Consensus 13 ~C~~~~~~g~~~C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~--~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G 90 (143)
T 4d90_A 13 ICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTP--NPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNG 90 (143)
T ss_dssp EEEC-----CCEEECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSS--CCCCTTCEEEECCCEETTEECCEEEECCTTEES
T ss_pred EeeCCCCCCCEEeECCCCCCCCCCccCccccccccccccCCcCCC--CCCCCCCEecCCCccccCCCCCeEeECcCCCcC
Confidence 566555323499999999974210 0112335677764 3453 5888 6778999999999975
No 235
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=94.51 E-value=0.019 Score=48.05 Aligned_cols=35 Identities=29% Similarity=0.767 Sum_probs=27.6
Q ss_pred cCccccccCCCcccc--cce--eCCCeeeeecCCCcccC
Q psy948 1076 NVDECAKVETNQCGH--KCV--DTLTGYYCECNTGYNDD 1110 (1576)
Q Consensus 1076 didEC~~~~~~~Csq--~C~--Nt~Gsy~C~C~~Gy~l~ 1110 (1576)
+||||.....++|.+ .|+ ++.++|+|.|++||.+.
T Consensus 2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~ 40 (53)
T 1egf_A 2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGD 40 (53)
T ss_dssp EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSS
T ss_pred CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCC
Confidence 478887422358876 799 89999999999999864
No 236
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=94.37 E-value=4.3 Score=52.53 Aligned_cols=121 Identities=14% Similarity=0.116 Sum_probs=69.9
Q ss_pred eeeecccCCcEEEEeecccc--eeEEEeecccccceeeecccceeeeeccCCccee-eecCCCCeEEEeecCCCCCCCCC
Q psy948 1433 EALDIDPVDEIIYWVDSYDR--NIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAI-AVDWIAHNIYWTVSDRSGSKPKG 1509 (1576)
Q Consensus 1433 ~ald~D~~~~~vYWsD~~~~--~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~gl-AVDwv~~nLYWTD~~~~~~~~~~ 1509 (1576)
..+.|.+..+ ++|+....+ .|++..+.+. ...+. ..-..+..+ +++..++.||++.... .....
T Consensus 340 ~~~~~spdg~-~~~~~~~~g~~~l~~~~~~~~-~~~l~---------~~~~~v~~~~~~s~dg~~l~~~~~~~--~~~~~ 406 (741)
T 2ecf_A 340 NSLRFLDDGS-ILWSSERTGFQHLYRIDSKGK-AAALT---------HGNWSVDELLAVDEKAGLAYFRAGIE--SARES 406 (741)
T ss_dssp SCCEECTTSC-EEEEECTTSSCEEEEECSSSC-EEESC---------CSSSCEEEEEEEETTTTEEEEEECSS--CTTCB
T ss_pred CceEECCCCe-EEEEecCCCccEEEEEcCCCC-eeeee---------ecceEEEeEeEEeCCCCEEEEEEeCC--CCceE
Confidence 4667777665 666544443 5666554432 11111 111233355 5888888898886531 11134
Q ss_pred eEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEec--CCCCcEEEeecCCCCcEEE
Q psy948 1510 KVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAET--GASPRIESAWMDGSHRSAT 1568 (1576)
Q Consensus 1510 ~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~--g~~~~Iera~mDGs~r~~i 1568 (1576)
.|....++|+..+.|.. .....++++.|...+|.++-. ...+.|....++|...+.|
T Consensus 407 ~l~~~~~~g~~~~~l~~--~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~~~~~l 465 (741)
T 2ecf_A 407 QIYAVPLQGGQPQRLSK--APGMHSASFARNASVYVDSWSNNSTPPQIELFRANGEKIATL 465 (741)
T ss_dssp EEEEEETTCCCCEECCC--SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTSCEEECS
T ss_pred EEEEEEcCCCCeeeccc--CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCCeEEEe
Confidence 57777777875555542 444568899998887777643 3345788888877654433
No 237
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=93.88 E-value=12 Score=50.71 Aligned_cols=116 Identities=9% Similarity=0.004 Sum_probs=74.5
Q ss_pred cceeeecccCCcEEEEeecccceeE-EEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCCCC
Q psy948 1431 RIEALDIDPVDEIIYWVDSYDRNIR-RSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPKG 1509 (1576)
Q Consensus 1431 ~i~ald~D~~~~~vYWsD~~~~~I~-r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~~ 1509 (1576)
.+..+.|. ..+.|+++.. ...|+ ...+.+..... +. .....+..+++.+-++.|+++.. .+
T Consensus 339 ~~~~~~~s-dg~~l~~~s~-~~~l~~~~d~~~~~~~~--------l~-~~~~~~~~~~~SpDG~~la~~~~-------~~ 400 (1045)
T 1k32_A 339 RYVRRGGD-TKVAFIHGTR-EGDFLGIYDYRTGKAEK--------FE-ENLGNVFAMGVDRNGKFAVVAND-------RF 400 (1045)
T ss_dssp EEEEECSS-SEEEEEEEET-TEEEEEEEETTTCCEEE--------CC-CCCCSEEEEEECTTSSEEEEEET-------TS
T ss_pred eEEeeeEc-CCCeEEEEEC-CCceEEEEECCCCCceE--------ec-CCccceeeeEECCCCCEEEEECC-------CC
Confidence 56667777 5566766544 45666 44444322111 11 12245678899888888988765 36
Q ss_pred eEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEecCC--------CCcEEEeecCCCC
Q psy948 1510 KVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAETGA--------SPRIESAWMDGSH 1564 (1576)
Q Consensus 1510 ~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~--------~~~Iera~mDGs~ 1564 (1576)
+|.+.++.+...+.++........++++.|...+|.|+.... ...|...++++..
T Consensus 401 ~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 401 EIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp EEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred eEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc
Confidence 899999977666666644444558899999888888876421 2467777777644
No 238
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=93.74 E-value=0.021 Score=49.10 Aligned_cols=31 Identities=42% Similarity=1.089 Sum_probs=26.4
Q ss_pred cCccccccCCCcccc----cceeCCCeeeeecCCCcc-c
Q psy948 1076 NVDECAKVETNQCGH----KCVDTLTGYYCECNTGYN-D 1109 (1576)
Q Consensus 1076 didEC~~~~~~~Csq----~C~Nt~Gsy~C~C~~Gy~-l 1109 (1576)
++|||+. ++|.+ .|+|+.|+|+|.|++||. +
T Consensus 10 ~~d~C~s---nPC~nga~gtC~~~~g~y~C~C~~Gy~~G 45 (61)
T 2k2s_B 10 TPAACSS---NPCGPEAAGTCKETNSGYICRCNQGYRIS 45 (61)
T ss_dssp SCCHHHH---CSSCSSSCCEEEECSSEEEEECCTTEEEE
T ss_pred CCCcCcC---CCCcCCCccccccCCCceEeECCCCCccC
Confidence 3789974 67864 699999999999999998 5
No 239
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=93.52 E-value=2.9 Score=52.29 Aligned_cols=75 Identities=13% Similarity=-0.001 Sum_probs=55.2
Q ss_pred cCCcceeeecCCCCeEEEeecCCCCCCCCCeEEEEEcCCCc---------eEEEee--CCCCCceEEEEecCCCeEEEEe
Q psy948 1480 IGKLTAIAVDWIAHNIYWTVSDRSGSKPKGKVMVAHNDGRY---------RRSLVS--ENLESPSSIALDPTLGKMFWAE 1548 (1576)
Q Consensus 1480 ~~~p~glAVDwv~~nLYWTD~~~~~~~~~~~I~v~~ldG~~---------~~~lv~--~~l~~P~~IavDp~~G~LYWTD 1548 (1576)
-..|.|+++.+-++.||-++.. .++|.|.+++... +.+++. .--..|+.+|++|. |++|-|.
T Consensus 276 g~~PhGv~~sPDGk~v~V~~~~------s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~d-G~aY~t~ 348 (595)
T 1fwx_A 276 ANNPHGCNMAPDKKHLCVAGKL------SPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGR-GNAYTSL 348 (595)
T ss_dssp ESSCCCEEECTTSSEEEEECTT------SSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTT-SEEEEEE
T ss_pred CCCceEEEEcCCCCEEEEeCCC------CCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCC-CeEEEEE
Confidence 3589999999999999999875 6889999887321 111222 22256999999995 5988888
Q ss_pred cCCCCcEEEeecCC
Q psy948 1549 TGASPRIESAWMDG 1562 (1576)
Q Consensus 1549 ~g~~~~Iera~mDG 1562 (1576)
+-.+ .|...+++.
T Consensus 349 ~lds-qV~kwdi~~ 361 (595)
T 1fwx_A 349 FLDS-QVVKWNIED 361 (595)
T ss_dssp TTTT-EEEEEEHHH
T ss_pred ecCC-cEEEEEhhH
Confidence 7544 677777765
No 240
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=93.51 E-value=4.7 Score=50.54 Aligned_cols=109 Identities=13% Similarity=0.027 Sum_probs=61.7
Q ss_pred ccceeeecccCCcEEEEeecccc--eeEEEeecccccceeeecccceeeeeccCCcceee--------ecCCCCeEEEee
Q psy948 1430 RRIEALDIDPVDEIIYWVDSYDR--NIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIA--------VDWIAHNIYWTV 1499 (1576)
Q Consensus 1430 ~~i~ald~D~~~~~vYWsD~~~~--~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glA--------VDwv~~nLYWTD 1499 (1576)
..+..+.|.+..+.||.++ ..+ .|++.++.+.... ++... ...+.+++ +.+-+ .||++-
T Consensus 195 ~~~~~~~~SpDG~~l~~~~-~~~~~~i~~~d~~~~~~~-~~~~~--------~~~~~~~~~~~~~~~~~spdg-~~~~~~ 263 (582)
T 3o4h_A 195 GSFSSASISPGMKVTAGLE-TAREARLVTVDPRDGSVE-DLELP--------SKDFSSYRPTAITWLGYLPDG-RLAVVA 263 (582)
T ss_dssp CEEEEEEECTTSCEEEEEE-CSSCEEEEEECTTTCCEE-ECCCS--------CSHHHHHCCSEEEEEEECTTS-CEEEEE
T ss_pred CccccceECCCCCEEEEcc-CCCeeEEEEEcCCCCcEE-EccCC--------CcChhhhhhccccceeEcCCC-cEEEEE
Confidence 3456778888888888443 333 7777766543322 11111 11233444 77666 777775
Q ss_pred cCCCCCCCCCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEec--CCCCcEEEeecCC
Q psy948 1500 SDRSGSKPKGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAET--GASPRIESAWMDG 1562 (1576)
Q Consensus 1500 ~~~~~~~~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~--g~~~~Iera~mDG 1562 (1576)
.. .+++.+..+ |+..+ .......++++. .|.++++-. ...++|...+++|
T Consensus 264 ~~------~g~~~l~~~-g~~~~----~~~~~v~~~~~s--dg~~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 264 RR------EGRSAVFID-GERVE----APQGNHGRVVLW--RGKLVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp EE------TTEEEEEET-TEEEC----CCSSEEEEEEEE--TTEEEEEEEETTEEEEEEEETTCC
T ss_pred Ec------CCcEEEEEE-CCeec----cCCCceEEEEec--CCEEEEEEcCCCCCCeEEEEcCCC
Confidence 43 367777777 64322 112345678887 566655532 3346788888777
No 241
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=93.38 E-value=0.025 Score=63.78 Aligned_cols=44 Identities=32% Similarity=0.732 Sum_probs=33.6
Q ss_pred cCCCCccCCCCccc--cccccCCCceEEEcCCCcEecCCCCCceeccCC
Q psy948 1354 LDVDECATGIHHCS--QVCTNLNGTYACSCNAGFTLSDGLSGVCKANDN 1400 (1576)
Q Consensus 1354 ~d~neC~~~~~~Cs--~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~~~~ 1400 (1576)
.++|||..+.+.|+ ..|+|++|+|+|.|+.||.+ ++. .|.+.+.
T Consensus 3 ~DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~G-nG~--~C~d~d~ 48 (285)
T 1gl4_A 3 LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYTG-NGR--QCVAEGS 48 (285)
T ss_dssp ----CHHHHGGGSCTTEEEEECSSCEEEEECTTEEE-CSS--SEEETTC
T ss_pred ccchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCC-CCC--cCCCCCC
Confidence 57899987788995 57999999999999999986 444 5987665
No 242
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=93.26 E-value=14 Score=47.19 Aligned_cols=75 Identities=9% Similarity=0.086 Sum_probs=51.0
Q ss_pred eeecCCCCeEEEeecCCCCCCCCCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEec--CCCCcEEEeecCCC
Q psy948 1486 IAVDWIAHNIYWTVSDRSGSKPKGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAET--GASPRIESAWMDGS 1563 (1576)
Q Consensus 1486 lAVDwv~~nLYWTD~~~~~~~~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~--g~~~~Iera~mDGs 1563 (1576)
++++..++.||++.... ......|.+.++++...+.|. ......++++.|...+|.++-. ...+.|...++++.
T Consensus 361 ~~~spdg~~l~~~~~~~--~~~~~~l~~~d~~~~~~~~l~--~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~ 436 (706)
T 2z3z_A 361 AGFDPKGTRLYFESTEA--SPLERHFYCIDIKGGKTKDLT--PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKG 436 (706)
T ss_dssp EEECTTSSEEEEEESSS--CTTCBEEEEEETTCCCCEESC--CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSC
T ss_pred eEEcCCCCEEEEEecCC--CCceEEEEEEEcCCCCceecc--CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCC
Confidence 68888888999987541 001247888888776544443 3344678999998877777643 33457988888876
Q ss_pred C
Q psy948 1564 H 1564 (1576)
Q Consensus 1564 ~ 1564 (1576)
.
T Consensus 437 ~ 437 (706)
T 2z3z_A 437 S 437 (706)
T ss_dssp E
T ss_pred e
Confidence 6
No 243
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=92.97 E-value=1.3 Score=51.03 Aligned_cols=148 Identities=9% Similarity=-0.001 Sum_probs=84.5
Q ss_pred eEEEEecCCceeeeccccccccccccccc--cceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeec
Q psy948 1402 LTIVYSNGPEIRAYETHKRRFRDVISDER--RIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKS 1479 (1576)
Q Consensus 1402 ~~ll~s~~~~Ir~i~~~~~~~~~~v~~~~--~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~ 1479 (1576)
+++..+....|+.+.+........+.... .+.++++.+..+.+|.+....+.|+..++........+ .+..
T Consensus 13 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~-------~~~~ 85 (349)
T 1jmx_B 13 YMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHA-------NLSS 85 (349)
T ss_dssp EEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE-------ESCC
T ss_pred EEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEE-------Eccc
Confidence 33444445556666554433222222222 47788888888889998887888887765432211111 1111
Q ss_pred -----cCCcceeeecCCCCeEEEeecCC---CC--CCCCCeEEEEEcCCCc-eE--EEeeCCCCCceEEEEecCCCeEEE
Q psy948 1480 -----IGKLTAIAVDWIAHNIYWTVSDR---SG--SKPKGKVMVAHNDGRY-RR--SLVSENLESPSSIALDPTLGKMFW 1546 (1576)
Q Consensus 1480 -----~~~p~glAVDwv~~nLYWTD~~~---~~--~~~~~~I~v~~ldG~~-~~--~lv~~~l~~P~~IavDp~~G~LYW 1546 (1576)
...|.+|++++.++.||.+.... .. ....++|.+.++.... .+ ..+ ..-..+.+|+++|... ||.
T Consensus 86 ~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~-l~~ 163 (349)
T 1jmx_B 86 VPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTF-PMPRQVYLMRAADDGS-LYV 163 (349)
T ss_dssp STTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEE-ECCSSCCCEEECTTSC-EEE
T ss_pred ccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeec-cCCCcccceeECCCCc-EEE
Confidence 22489999999999999987420 00 0002679999886521 11 122 2233688999998755 776
Q ss_pred EecCCCCcEEEeecCC
Q psy948 1547 AETGASPRIESAWMDG 1562 (1576)
Q Consensus 1547 TD~g~~~~Iera~mDG 1562 (1576)
+.. .|...++..
T Consensus 164 ~~~----~i~~~d~~~ 175 (349)
T 1jmx_B 164 AGP----DIYKMDVKT 175 (349)
T ss_dssp ESS----SEEEECTTT
T ss_pred ccC----cEEEEeCCC
Confidence 532 377776653
No 244
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=92.94 E-value=0.037 Score=47.61 Aligned_cols=34 Identities=26% Similarity=0.738 Sum_probs=27.1
Q ss_pred ccCCCCccCCCCccc----cccccCCCceEEEcCCCcE-ec
Q psy948 1353 CLDVDECATGIHHCS----QVCTNLNGTYACSCNAGFT-LS 1388 (1576)
Q Consensus 1353 c~d~neC~~~~~~Cs----~lC~n~~gsy~C~Cp~G~~-l~ 1388 (1576)
+.++++|.. .+|. ..|+++.++|+|.||+||+ +.
T Consensus 8 ~~~~d~C~s--nPC~nga~gtC~~~~g~y~C~C~~Gy~~G~ 46 (61)
T 2k2s_B 8 SETPAACSS--NPCGPEAAGTCKETNSGYICRCNQGYRISL 46 (61)
T ss_dssp TTSCCHHHH--CSSCSSSCCEEEECSSEEEEECCTTEEEEE
T ss_pred cCCCCcCcC--CCCcCCCccccccCCCceEeECCCCCccCC
Confidence 456778874 4564 4799999999999999999 64
No 245
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=92.88 E-value=1.8 Score=47.88 Aligned_cols=124 Identities=9% Similarity=-0.060 Sum_probs=77.1
Q ss_pred ccceeeecccCCcEEEEeecc---cceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCC
Q psy948 1430 RRIEALDIDPVDEIIYWVDSY---DRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSK 1506 (1576)
Q Consensus 1430 ~~i~ald~D~~~~~vYWsD~~---~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~ 1506 (1576)
..+..+.|.+....|+++... ...|+...+.+..... +.....+..+++.+.++.|+++....
T Consensus 85 ~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~----------~~~~~~~~~~~~spdg~~l~~~~~~~---- 150 (297)
T 2ojh_A 85 ICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRL----------MTKNLPSYWHGWSPDGKSFTYCGIRD---- 150 (297)
T ss_dssp CBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEE----------CCSSSSEEEEEECTTSSEEEEEEEET----
T ss_pred ccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEE----------eecCCCccceEECCCCCEEEEEECCC----
Confidence 456778888888888887632 4567766554332111 11222356677877788888775431
Q ss_pred CCCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEec-CCCCcEEEeecCCCCcEEE
Q psy948 1507 PKGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAET-GASPRIESAWMDGSHRSAT 1568 (1576)
Q Consensus 1507 ~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~-g~~~~Iera~mDGs~r~~i 1568 (1576)
..-.|...++++...+.+. .....+..+++.|...+|+++.. ....+|+...+++.....|
T Consensus 151 ~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~ 212 (297)
T 2ojh_A 151 QVFDIYSMDIDSGVETRLT-HGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERI 212 (297)
T ss_dssp TEEEEEEEETTTCCEEECC-CSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEEC
T ss_pred CceEEEEEECCCCcceEcc-cCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEE
Confidence 0124555556665444333 44456789999998888888753 4456788888777655444
No 246
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=92.71 E-value=21 Score=46.00 Aligned_cols=124 Identities=6% Similarity=-0.015 Sum_probs=70.3
Q ss_pred cccCCcEEEEeecc---cceeEEEeecccccceeeecccceeeeeccC--CcceeeecCCCCeEEEeecCCCCCCCCCeE
Q psy948 1437 IDPVDEIIYWVDSY---DRNIRRSFMLEAQKGQVQAGFGQDLGIKSIG--KLTAIAVDWIAHNIYWTVSDRSGSKPKGKV 1511 (1576)
Q Consensus 1437 ~D~~~~~vYWsD~~---~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~--~p~glAVDwv~~nLYWTD~~~~~~~~~~~I 1511 (1576)
+.+..++||++... ...|+++.+.+...... ..+ +.... .+.++++. -.+.|+++.... ...+|
T Consensus 293 ~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~-----~~l-~~~~~~~~~~~~~~~-~~~~lv~~~~~~----g~~~l 361 (710)
T 2xdw_A 293 VTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKW-----KVL-VPEHEKDVLEWVACV-RSNFLVLCYLHD----VKNTL 361 (710)
T ss_dssp EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGC-----EEE-ECCCSSCEEEEEEEE-TTTEEEEEEEET----TEEEE
T ss_pred EeccCCEEEEEECCCCCCCEEEEEeCCCCCcccc-----eec-cCCCCCCeEEEEEEE-cCCEEEEEEEEC----CEEEE
Confidence 55667788876432 34687777655321100 001 11111 23344443 267788886531 13568
Q ss_pred EEEEc-CCCceEEEeeCCCCCceEEEEecCCCeEEEEe--cCCCCcEEEeecCCCC--cEEEEecC
Q psy948 1512 MVAHN-DGRYRRSLVSENLESPSSIALDPTLGKMFWAE--TGASPRIESAWMDGSH--RSATQISN 1572 (1576)
Q Consensus 1512 ~v~~l-dG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD--~g~~~~Iera~mDGs~--r~~i~~~~ 1572 (1576)
.+.++ +|+..+.|. .......++++.|....||++- ....+.|.+.++.... +++|....
T Consensus 362 ~~~~~~~g~~~~~l~-~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~~~l~~~~ 426 (710)
T 2xdw_A 362 QLHDLATGALLKIFP-LEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVFREVT 426 (710)
T ss_dssp EEEETTTCCEEEEEC-CCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSSCCCEEEEECC
T ss_pred EEEECCCCCEEEecC-CCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCccceEEeeecc
Confidence 88888 676444443 2234456788888777787664 3456789999997655 56665433
No 247
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=92.42 E-value=0.056 Score=45.46 Aligned_cols=32 Identities=25% Similarity=0.695 Sum_probs=24.6
Q ss_pred cCccccccCCCcccc--cc-----eeCCCeeeeecCCCcccC
Q psy948 1076 NVDECAKVETNQCGH--KC-----VDTLTGYYCECNTGYNDD 1110 (1576)
Q Consensus 1076 didEC~~~~~~~Csq--~C-----~Nt~Gsy~C~C~~Gy~l~ 1110 (1576)
+||||+. .+|.+ .| ++..++|+|.|++||.+.
T Consensus 7 ~~~eC~s---~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~ 45 (55)
T 3u7u_G 7 KCAEKEK---TFCVNGGECFMVKDLSNPSRYLCKCPNEFTGD 45 (55)
T ss_dssp ECCSTTT---TTSCTTCEEEEECCC--CCCEEEEECTTEEST
T ss_pred cCCCCcC---CCCCCCCCcCCCCccCCCCCEeEeCCCCCcCC
Confidence 5889974 67866 78 567789999999999874
No 248
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=92.07 E-value=0.057 Score=50.67 Aligned_cols=40 Identities=18% Similarity=0.200 Sum_probs=32.0
Q ss_pred ceeeccCCceeccCCCccccCCCCccCCCCccccccccCCCceEEEcCCCcE
Q psy948 1335 YLCTCYQGFIIDKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFT 1386 (1576)
Q Consensus 1335 ~~C~C~~G~~~~~~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~ 1386 (1576)
|+|+|++||.+. .| ++++|.. .-|+|..++|+|.|++||+
T Consensus 2 y~C~C~~g~~g~-----~c-~~~~c~~------~pC~n~~~~y~C~C~~G~~ 41 (91)
T 1tpg_A 2 YQVICRDEKTQM-----IY-QQHQSWL------RPVLRSNRVEYCWCNSGRA 41 (91)
T ss_dssp CCCCCBCSSSCC-----BC-CSSCEEE------EECSSSSCEEEEECSSSCC
T ss_pred eeeECCCCCcCC-----eE-CCCcccC------CccccCCCCcEeECCCCCc
Confidence 899999999753 34 4677753 3488899999999999996
No 249
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=91.65 E-value=18 Score=48.91 Aligned_cols=117 Identities=11% Similarity=0.032 Sum_probs=69.6
Q ss_pred cceeeecc-cCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccC-CcceeeecCCCCeEEEeecCCCCCCCC
Q psy948 1431 RIEALDID-PVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIG-KLTAIAVDWIAHNIYWTVSDRSGSKPK 1508 (1576)
Q Consensus 1431 ~i~ald~D-~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~-~p~glAVDwv~~nLYWTD~~~~~~~~~ 1508 (1576)
.+.++.|. +....|.++. .+.|+...+.+.....+. ...+ .+.++++. -++.|++... .
T Consensus 297 ~v~~~~~S~pdG~~la~~~--~~~i~~~~~~~~~~~~~~---------~~~~~~~~~~~~s-dg~~l~~~s~-------~ 357 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFVS--RGQAFIQDVSGTYVLKVP---------EPLRIRYVRRGGD-TKVAFIHGTR-------E 357 (1045)
T ss_dssp GGGEEEEEECGGGCEEEEE--TTEEEEECTTSSBEEECS---------CCSCEEEEEECSS-SEEEEEEEET-------T
T ss_pred ccceeeecCCCCCEEEEEE--cCEEEEEcCCCCceEEcc---------CCCcceEEeeeEc-CCCeEEEEEC-------C
Confidence 46777888 7777676654 455655544332111100 0011 33445554 4456777653 2
Q ss_pred CeEE-EEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEecCCCCcEEEeecCCCCcEEEE
Q psy948 1509 GKVM-VAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAETGASPRIESAWMDGSHRSATQ 1569 (1576)
Q Consensus 1509 ~~I~-v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~mDGs~r~~i~ 1569 (1576)
..|. +.++++...+.|. .....+.++++.|...+|+++... ..|...++.+...+.+.
T Consensus 358 ~~l~~~~d~~~~~~~~l~-~~~~~~~~~~~SpDG~~la~~~~~--~~v~~~d~~tg~~~~~~ 416 (1045)
T 1k32_A 358 GDFLGIYDYRTGKAEKFE-ENLGNVFAMGVDRNGKFAVVANDR--FEIMTVDLETGKPTVIE 416 (1045)
T ss_dssp EEEEEEEETTTCCEEECC-CCCCSEEEEEECTTSSEEEEEETT--SEEEEEETTTCCEEEEE
T ss_pred CceEEEEECCCCCceEec-CCccceeeeEECCCCCEEEEECCC--CeEEEEECCCCceEEec
Confidence 5788 8888887666555 455678899999988888877643 36777777655444443
No 250
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=91.56 E-value=30 Score=44.22 Aligned_cols=103 Identities=14% Similarity=0.024 Sum_probs=60.4
Q ss_pred CeEEEEeccCCceEecccc--c--CCcceEEEeCCcceEEEecCCC-------cCeEEEEecCCCCcEEEEeccCCCCCc
Q psy948 1175 IKLDVAELDGTNRKTLKTA--I--QDPRGITLHPGIGYVYFSSWNL-------QAYIGKIGMDGSNFTRILTHEDDIAWP 1243 (1576)
Q Consensus 1175 ~~I~v~~ldG~~r~~l~~~--l--~~P~~iavdP~~g~lywtd~g~-------~~~I~ra~mdGs~~~~iv~~~~~l~~P 1243 (1576)
++|.+.++.+...+.+... + ....++++.|...+|..+.... ...|...++++...+++......-.++
T Consensus 37 g~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~ 116 (723)
T 1xfd_A 37 GTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKL 116 (723)
T ss_dssp SCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCC
T ss_pred CCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccc
Confidence 3455555544333333222 1 1378899999988877764321 256777777766554443322222235
Q ss_pred ceEEEeccCCeEEEEcCCCCeEEEEeCCCCceEEEE
Q psy948 1244 NALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVI 1279 (1576)
Q Consensus 1244 ~gLaiD~~~~rlYw~D~~~~~I~s~~~dG~~r~~v~ 1279 (1576)
..+++.+..++|.++.. ..|...++++...+.+.
T Consensus 117 ~~~~~SPdG~~la~~~~--~~i~~~~~~~g~~~~~~ 150 (723)
T 1xfd_A 117 QYAGWGPKGQQLIFIFE--NNIYYCAHVGKQAIRVV 150 (723)
T ss_dssp SBCCBCSSTTCEEEEET--TEEEEESSSSSCCEEEE
T ss_pred cccEECCCCCEEEEEEC--CeEEEEECCCCceEEEe
Confidence 66777777777777665 57888888776555444
No 251
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=91.54 E-value=0.097 Score=42.29 Aligned_cols=35 Identities=26% Similarity=0.785 Sum_probs=26.3
Q ss_pred cCccccccCCCcccc-cceeCC--CeeeeecCCCcccC
Q psy948 1076 NVDECAKVETNQCGH-KCVDTL--TGYYCECNTGYNDD 1110 (1576)
Q Consensus 1076 didEC~~~~~~~Csq-~C~Nt~--Gsy~C~C~~Gy~l~ 1110 (1576)
+|++|.....++|.+ .|++.. ++|.|.|++||.+.
T Consensus 2 ~i~~C~~~~~~pC~nG~C~~~~~~~~~~C~C~~GytG~ 39 (46)
T 1k36_A 2 SITKCSSDMNGYCLHGQCIYLVDMSQNYCRCEVGYTGV 39 (46)
T ss_dssp CEECCCTTCCSSCSSEEEEEETTTTEEEEEECTTCSST
T ss_pred ccccCCCCCCCCCCCCEeeccCCCCCEEEECCCCCccC
Confidence 367786423467876 888754 79999999999874
No 252
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=91.42 E-value=11 Score=48.93 Aligned_cols=116 Identities=12% Similarity=0.135 Sum_probs=67.6
Q ss_pred cCCcEEEEeec---ccceeEEEeecccc--cceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCCCCeEEE
Q psy948 1439 PVDEIIYWVDS---YDRNIRRSFMLEAQ--KGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPKGKVMV 1513 (1576)
Q Consensus 1439 ~~~~~vYWsD~---~~~~I~r~~l~~~~--~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~~~I~v 1513 (1576)
+..++||+... ....|+++.+.+.. ...++. ..-..+.++++ ..+.||++.... ...+|.+
T Consensus 325 ~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~--------~~~~~l~~~~~--~~~~lv~~~~~d----g~~~l~~ 390 (741)
T 1yr2_A 325 GVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVP--------ESKDNLESVGI--AGNRLFASYIHD----AKSQVLA 390 (741)
T ss_dssp EETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEEC--------CCSSEEEEEEE--EBTEEEEEEEET----TEEEEEE
T ss_pred ccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEec--------CCCCeEEEEEE--ECCEEEEEEEEC----CEEEEEE
Confidence 56777877633 24568887766531 111111 11112334444 478888886531 1457888
Q ss_pred EEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEe--cCCCCcEEEeecCCCCcEEE
Q psy948 1514 AHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAE--TGASPRIESAWMDGSHRSAT 1568 (1576)
Q Consensus 1514 ~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD--~g~~~~Iera~mDGs~r~~i 1568 (1576)
.+++|+..+.|.........+++++|....|+++- ....+.|.+.++++..+++|
T Consensus 391 ~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l 447 (741)
T 1yr2_A 391 FDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPW 447 (741)
T ss_dssp EETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEEC
T ss_pred EeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEE
Confidence 88888755544322344456788888777777654 34456899999887655544
No 253
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=91.41 E-value=7.8 Score=45.22 Aligned_cols=133 Identities=10% Similarity=-0.060 Sum_probs=71.3
Q ss_pred ccceeeeccc-CCcEEEEeecc-----cceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCC
Q psy948 1430 RRIEALDIDP-VDEIIYWVDSY-----DRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRS 1503 (1576)
Q Consensus 1430 ~~i~ald~D~-~~~~vYWsD~~-----~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~ 1503 (1576)
..+..+.|.+ ..++|+++... ...|+.+.+.+.....+.... .......+++.+-++.|+|+....
T Consensus 188 ~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~-------~~~~~~~~~~spdg~~l~~~~~~~- 259 (388)
T 3pe7_A 188 QWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHA-------EGESCTHEFWVPDGSALVYVSYLK- 259 (388)
T ss_dssp SCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCC-------TTEEEEEEEECTTSSCEEEEEEET-
T ss_pred ccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCC-------CCcccccceECCCCCEEEEEecCC-
Confidence 3456777888 66777665433 336776665543322221100 001233567777777787764321
Q ss_pred CCCCCCeEEEEEcCCCceEEEeeCCC-----CCceEEEEecCCCeEEEEec-------CCCCcEEEeecCCCCcEEEEec
Q psy948 1504 GSKPKGKVMVAHNDGRYRRSLVSENL-----ESPSSIALDPTLGKMFWAET-------GASPRIESAWMDGSHRSATQIS 1571 (1576)
Q Consensus 1504 ~~~~~~~I~v~~ldG~~~~~lv~~~l-----~~P~~IavDp~~G~LYWTD~-------g~~~~Iera~mDGs~r~~i~~~ 1571 (1576)
+ .....|.+.++++...+.|..... ..|.++++.|...+|+++-. .....|.+.++++...+.|...
T Consensus 260 ~-~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~ 338 (388)
T 3pe7_A 260 G-SPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARH 338 (388)
T ss_dssp T-CCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEEEEEEC
T ss_pred C-CCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEeccc
Confidence 1 111259999988776655543111 11444567777677776531 3345799999888766666543
No 254
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=91.40 E-value=7.7 Score=49.98 Aligned_cols=119 Identities=11% Similarity=0.067 Sum_probs=65.6
Q ss_pred cCCcEEEEeec---ccceeEEEeeccccc---ceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCCCCeEE
Q psy948 1439 PVDEIIYWVDS---YDRNIRRSFMLEAQK---GQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPKGKVM 1512 (1576)
Q Consensus 1439 ~~~~~vYWsD~---~~~~I~r~~l~~~~~---~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~~~I~ 1512 (1576)
+..+ ||++.. ...+|+++.+.+... ..++... ....+.++++. .+.|+++.... ...+|.
T Consensus 280 ~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~-------~~~~l~~~~~~--~~~lv~~~~~d----g~~~l~ 345 (695)
T 2bkl_A 280 WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPED-------SSASLLSVSIV--GGHLSLEYLKD----ATSEVR 345 (695)
T ss_dssp ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCC-------SSCEEEEEEEE--TTEEEEEEEET----TEEEEE
T ss_pred cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCC-------CCCeEEEEEEE--CCEEEEEEEEC----CEEEEE
Confidence 3445 666432 346788877654332 1111100 01123455554 77888886531 145677
Q ss_pred EEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEec--CCCCcEEEeecCCCCcEEEEec
Q psy948 1513 VAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAET--GASPRIESAWMDGSHRSATQIS 1571 (1576)
Q Consensus 1513 v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~--g~~~~Iera~mDGs~r~~i~~~ 1571 (1576)
+.+++|+..+.|.........++++.|....|+++-. ...+.|.+.++++..+++|...
T Consensus 346 ~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l~~~ 406 (695)
T 2bkl_A 346 VATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELWAKV 406 (695)
T ss_dssp EEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEEEEC
T ss_pred EEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEecC
Confidence 8888887544443222333345667776666765543 3346799999887666666543
No 255
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=91.36 E-value=0.067 Score=56.41 Aligned_cols=49 Identities=29% Similarity=0.745 Sum_probs=39.4
Q ss_pred cceeeccCCceeccCCCcccc-CCCCccCCCCccc--cccccC-CCceEEEcCCCcEec
Q psy948 1334 GYLCTCYQGFIIDKNNAKKCL-DVDECATGIHHCS--QVCTNL-NGTYACSCNAGFTLS 1388 (1576)
Q Consensus 1334 ~~~C~C~~G~~~~~~~~~~c~-d~neC~~~~~~Cs--~lC~n~-~gsy~C~Cp~G~~l~ 1388 (1576)
+|+|+|++||. +..|. ++++|.. ...|+ ..|+++ +++|+|.|++||++.
T Consensus 113 ~~~C~C~~G~~-----G~~C~~~~~~C~~-~~~C~~~g~C~~~~~~~~~C~C~~G~~G~ 165 (169)
T 2vj2_A 113 PWQCLCETNWG-----GQLCDKDLNYCGT-HQPCLNGGTCSNTGPDKYQCSCPEGYSGP 165 (169)
T ss_dssp TTCCEECTTEE-----TTTTCEESCHHHH-TCCCCTTCEEEECSTTCEEEECCTTCCST
T ss_pred CCEEeCCCCCC-----CCcccCCCCCCCC-CCCCCCCCEEcCCCCCCcEeECCCCCcCc
Confidence 38999999997 35676 7888874 35675 489996 899999999999864
No 256
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=91.33 E-value=25 Score=40.65 Aligned_cols=81 Identities=6% Similarity=0.023 Sum_probs=50.4
Q ss_pred cceEEEeCCcceEEEecC-CCcCeEEEEecCCCCcEEEEeccCCCCCcceEEEeccCCeEEEEcCCCCeEEEEeCCCCce
Q psy948 1197 PRGITLHPGIGYVYFSSW-NLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHK 1275 (1576)
Q Consensus 1197 P~~iavdP~~g~lywtd~-g~~~~I~ra~mdGs~~~~iv~~~~~l~~P~gLaiD~~~~rlYw~D~~~~~I~s~~~dG~~r 1275 (1576)
+..+++.|...+|+++.. +....|....+++...+++... ......++++....++|+++.... .|..+++++...
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~--~~~~~~~~~~spdg~~l~~~~~~~-~l~~~d~~~~~~ 114 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEG--KGDNTFGGFISTDERAFFYVKNEL-NLMKVDLETLEE 114 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCS--SCBCTTTCEECTTSSEEEEEETTT-EEEEEETTTCCE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecC--CCCccccceECCCCCEEEEEEcCC-cEEEEECCCCCc
Confidence 566788888888776643 3446788878877654433221 111122356666778887776543 688888887766
Q ss_pred EEEEe
Q psy948 1276 HIVIS 1280 (1576)
Q Consensus 1276 ~~v~~ 1280 (1576)
+.+..
T Consensus 115 ~~~~~ 119 (396)
T 3c5m_A 115 QVIYT 119 (396)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 55554
No 257
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=90.53 E-value=1.9 Score=55.00 Aligned_cols=131 Identities=8% Similarity=-0.030 Sum_probs=81.3
Q ss_pred ccceeeecccCCcEEEEeecc---------cceeEEEeecc------cccceeeecccceeeeeccCCcceeeecCCCCe
Q psy948 1430 RRIEALDIDPVDEIIYWVDSY---------DRNIRRSFMLE------AQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHN 1494 (1576)
Q Consensus 1430 ~~i~ald~D~~~~~vYWsD~~---------~~~I~r~~l~~------~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~n 1494 (1576)
..+.+++|.+..++|+++... ...|++.++.+ .....+. ......+.++++.+-++.
T Consensus 130 ~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~--------~~~~~~~~~~~~SpDG~~ 201 (662)
T 3azo_A 130 LRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELS--------DDAHRFVTGPRLSPDGRQ 201 (662)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESS--------CSCSSEECCCEECTTSSE
T ss_pred ccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEE--------ecCCCcccCceECCCCCE
Confidence 456788899999999887533 25788777765 2221111 012234567888888999
Q ss_pred EEEeecCCCCC-CCCCeEEEEEcCC-C---ceEEEeeCCCCCceEEEEecCCCeEEEEecCCCCcEEEeecCCCCcEEE
Q psy948 1495 IYWTVSDRSGS-KPKGKVMVAHNDG-R---YRRSLVSENLESPSSIALDPTLGKMFWAETGASPRIESAWMDGSHRSAT 1568 (1576)
Q Consensus 1495 LYWTD~~~~~~-~~~~~I~v~~ldG-~---~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~mDGs~r~~i 1568 (1576)
|+|+...+... ....+|.+.++++ . ..+.|.......+.+++..|...++|-++.....+|.+.++++...+.|
T Consensus 202 la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l 280 (662)
T 3azo_A 202 AVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQL 280 (662)
T ss_dssp EEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEES
T ss_pred EEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeec
Confidence 99987532100 0125799999984 2 3344443334667889999876645545544445899998865544443
No 258
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=90.06 E-value=1.8 Score=53.70 Aligned_cols=121 Identities=18% Similarity=0.160 Sum_probs=76.5
Q ss_pred cccceeeecccCCcEEEEeecc---------------------cceeEEEeecccccc------ee-e-ecccc------
Q psy948 1429 ERRIEALDIDPVDEIIYWVDSY---------------------DRNIRRSFMLEAQKG------QV-Q-AGFGQ------ 1473 (1576)
Q Consensus 1429 ~~~i~ald~D~~~~~vYWsD~~---------------------~~~I~r~~l~~~~~~------~v-~-~~~~~------ 1473 (1576)
..++..+++++.+++||.+=.+ .+.|+|....+.... .+ + .+...
T Consensus 383 mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~~~ 462 (592)
T 4a9v_A 383 MDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTP 462 (592)
T ss_dssp EECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSG
T ss_pred ccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccccccc
Confidence 3468888999989999987221 256888876553211 11 1 11000
Q ss_pred ------eeeeeccCCcceeeecCCCCeEEE-eecCCCC-----CCCCCeEEEEEcC-CCceEEEeeCCCCCceEEEEecC
Q psy948 1474 ------DLGIKSIGKLTAIAVDWIAHNIYW-TVSDRSG-----SKPKGKVMVAHND-GRYRRSLVSENLESPSSIALDPT 1540 (1576)
Q Consensus 1474 ------~~~~~~~~~p~glAVDwv~~nLYW-TD~~~~~-----~~~~~~I~v~~ld-G~~~~~lv~~~l~~P~~IavDp~ 1540 (1576)
......+..|.+|+||. .++||+ ||..... ....+.|.+...+ |..++.+......+|.+|++.|.
T Consensus 463 ~~g~~~~~~~~~fnsPDnL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD 541 (592)
T 4a9v_A 463 KGGSSNITPQNMFNSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPD 541 (592)
T ss_dssp GGCCTTCCTTTCCCCEEEEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTT
T ss_pred ccCccCccccCccCCCCceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCC
Confidence 00012368899999996 589999 8864210 0123477888774 55444443345678999999999
Q ss_pred CCeEEEEecC
Q psy948 1541 LGKMFWAETG 1550 (1576)
Q Consensus 1541 ~G~LYWTD~g 1550 (1576)
..+||.+-..
T Consensus 542 ~ktLfV~vQH 551 (592)
T 4a9v_A 542 QKTLFVGIQH 551 (592)
T ss_dssp SSEEEEEEES
T ss_pred CCEEEEEEeC
Confidence 9999998753
No 259
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=89.85 E-value=16 Score=42.86 Aligned_cols=77 Identities=14% Similarity=-0.046 Sum_probs=43.2
Q ss_pred cccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCCC
Q psy948 1429 ERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPK 1508 (1576)
Q Consensus 1429 ~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~ 1508 (1576)
...+.+|+|.+..+.++.+-...+.|+-.++........+ ......+..|++.+....++.+-+. .
T Consensus 262 ~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~--------~~~~~~v~~~~~s~~~~~~l~s~~~------d 327 (416)
T 2pm9_A 262 QKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQF--------PARGNWCFKTKFAPEAPDLFACASF------D 327 (416)
T ss_dssp SSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEE--------ECSSSCCCCEEECTTCTTEEEECCS------S
T ss_pred cCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceee--------cCCCCceEEEEECCCCCCEEEEEec------C
Confidence 4467788888845555555555666654444322111110 0112456778888766456666442 4
Q ss_pred CeEEEEEcCCC
Q psy948 1509 GKVMVAHNDGR 1519 (1576)
Q Consensus 1509 ~~I~v~~ldG~ 1519 (1576)
++|.+-++...
T Consensus 328 ~~i~iw~~~~~ 338 (416)
T 2pm9_A 328 NKIEVQTLQNL 338 (416)
T ss_dssp SEEEEEESCCC
T ss_pred CcEEEEEccCC
Confidence 67888887654
No 260
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=89.62 E-value=54 Score=41.69 Aligned_cols=82 Identities=7% Similarity=-0.075 Sum_probs=50.7
Q ss_pred CeEEEEeccCCceEecccccCCcceEEEeCCcceEEEecCCCcCeEEEEecCC-----CCcEEEEeccCC----------
Q psy948 1175 IKLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDG-----SNFTRILTHEDD---------- 1239 (1576)
Q Consensus 1175 ~~I~v~~ldG~~r~~l~~~l~~P~~iavdP~~g~lywtd~g~~~~I~ra~mdG-----s~~~~iv~~~~~---------- 1239 (1576)
.+|.+.++.+...+.+...-..+..+++.|...+|+++. ...|....+++ ....+++.....
T Consensus 101 ~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~~---~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ 177 (706)
T 2z3z_A 101 GGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYVR---NHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQ 177 (706)
T ss_dssp TEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEEE---TTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGG
T ss_pred CEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEEE---CCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhh
Confidence 677777776655444443334567789999888887763 35677777775 444333321111
Q ss_pred --CCCcceEEEeccCCeEEEEc
Q psy948 1240 --IAWPNALTLDYFTERLYWAD 1259 (1576)
Q Consensus 1240 --l~~P~gLaiD~~~~rlYw~D 1259 (1576)
...+.+++.....++|+++.
T Consensus 178 ee~~~~~~~~~SpDg~~la~~~ 199 (706)
T 2z3z_A 178 REFGIEKGTFWSPKGSCLAFYR 199 (706)
T ss_dssp GCTTCCCSEEECTTSSEEEEEE
T ss_pred hhcCCCceEEECCCCCEEEEEE
Confidence 12257788887788887764
No 261
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=89.59 E-value=36 Score=39.55 Aligned_cols=115 Identities=11% Similarity=-0.087 Sum_probs=63.2
Q ss_pred cccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCCC
Q psy948 1429 ERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPK 1508 (1576)
Q Consensus 1429 ~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~ 1508 (1576)
...+.++.|.+.. ++++-...+.|+..++......... ......+..|++....+.|+-... .
T Consensus 289 ~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~--------~~~~~~i~~~~~s~~~~~l~~~~~-------d 351 (425)
T 1r5m_A 289 SQSIVSASWVGDD--KVISCSMDGSVRLWSLKQNTLLALS--------IVDGVPIFAGRISQDGQKYAVAFM-------D 351 (425)
T ss_dssp SSCEEEEEEETTT--EEEEEETTSEEEEEETTTTEEEEEE--------ECTTCCEEEEEECTTSSEEEEEET-------T
T ss_pred CccEEEEEECCCC--EEEEEeCCCcEEEEECCCCcEeEec--------ccCCccEEEEEEcCCCCEEEEEEC-------C
Confidence 3456778887765 4445555666655554322111110 111235677888876665555443 3
Q ss_pred CeEEEEEcCCCc--------------------eEEEeeCCCC--CceEEEEecCCCeEEEEecCCCCcEEEeecCC
Q psy948 1509 GKVMVAHNDGRY--------------------RRSLVSENLE--SPSSIALDPTLGKMFWAETGASPRIESAWMDG 1562 (1576)
Q Consensus 1509 ~~I~v~~ldG~~--------------------~~~lv~~~l~--~P~~IavDp~~G~LYWTD~g~~~~Iera~mDG 1562 (1576)
+.|.+-++.... ....+..... .+.+|++.|...+|+-.... ..|.-.+|+|
T Consensus 352 g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d--g~i~iw~~~g 425 (425)
T 1r5m_A 352 GQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSL--QEGSVVAIPG 425 (425)
T ss_dssp SCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESS--SCCEEEECCC
T ss_pred CeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecC--ceEEEEeecC
Confidence 678888876543 2222333333 67889999887776655432 2455555554
No 262
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=89.10 E-value=0.21 Score=40.06 Aligned_cols=24 Identities=33% Similarity=0.861 Sum_probs=19.6
Q ss_pred cccc--cce--eCCCeeeeecCCCcccC
Q psy948 1087 QCGH--KCV--DTLTGYYCECNTGYNDD 1110 (1576)
Q Consensus 1087 ~Csq--~C~--Nt~Gsy~C~C~~Gy~l~ 1110 (1576)
+|.+ .|+ ++.++|+|.|++||.+.
T Consensus 10 pC~ngg~C~~~~~~~~~~C~C~~G~~G~ 37 (45)
T 1a3p_A 10 YCLNGGVXMHIESLDSYTCNCVIGYSGD 37 (45)
T ss_dssp CCSSSCEEEECTTTSSEEEECCTTEETT
T ss_pred CCCCCCEEEeecCCCCEEEEcCCCCcCC
Confidence 5654 676 78899999999999864
No 263
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=89.01 E-value=0.22 Score=41.83 Aligned_cols=32 Identities=25% Similarity=0.526 Sum_probs=22.5
Q ss_pred CCCCccCCCCcc--cccc-----ccCCCceEEEcCCCcEec
Q psy948 1355 DVDECATGIHHC--SQVC-----TNLNGTYACSCNAGFTLS 1388 (1576)
Q Consensus 1355 d~neC~~~~~~C--s~lC-----~n~~gsy~C~Cp~G~~l~ 1388 (1576)
++|||+. .+| ...| ++..++|+|.||+||++.
T Consensus 7 ~~~eC~s--~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~ 45 (55)
T 3u7u_G 7 KCAEKEK--TFCVNGGECFMVKDLSNPSRYLCKCPNEFTGD 45 (55)
T ss_dssp ECCSTTT--TTSCTTCEEEEECCC--CCCEEEEECTTEEST
T ss_pred cCCCCcC--CCCCCCCCcCCCCccCCCCCEeEeCCCCCcCC
Confidence 5677764 345 3577 466789999999999974
No 264
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=88.83 E-value=25 Score=40.66 Aligned_cols=129 Identities=5% Similarity=-0.091 Sum_probs=68.3
Q ss_pred ccceeeeccc-CCcEEEEeeccc-----ceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCC
Q psy948 1430 RRIEALDIDP-VDEIIYWVDSYD-----RNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRS 1503 (1576)
Q Consensus 1430 ~~i~ald~D~-~~~~vYWsD~~~-----~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~ 1503 (1576)
..+..+.|.+ ..++|+++.... ..|+.+.+.+.....+... .....+..+++.+.++.|+++.....
T Consensus 188 ~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~-------~~~~~~~~~~~spdg~~l~~~~~~~~ 260 (396)
T 3c5m_A 188 AWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEH-------AEGESCTHEFWIPDGSAMAYVSYFKG 260 (396)
T ss_dssp SCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCC-------CTTEEEEEEEECTTSSCEEEEEEETT
T ss_pred cccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeecc-------CCCccccceEECCCCCEEEEEecCCC
Confidence 3455667777 556677654322 3677666654322211110 00113556788877888888743211
Q ss_pred CCCCCCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEec---------------CCCCcEEEeecCCCCcEEE
Q psy948 1504 GSKPKGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAET---------------GASPRIESAWMDGSHRSAT 1568 (1576)
Q Consensus 1504 ~~~~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~---------------g~~~~Iera~mDGs~r~~i 1568 (1576)
.....|.+.++.+...+.|.... . ..++..|..|.++.+.. .....|.+.++++...+.|
T Consensus 261 --~~~~~l~~~d~~~g~~~~l~~~~--~-~~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l 335 (396)
T 3c5m_A 261 --QTDRVIYKANPETLENEEVMVMP--P-CSHLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKL 335 (396)
T ss_dssp --TCCEEEEEECTTTCCEEEEEECC--S-EEEEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEE
T ss_pred --CccceEEEEECCCCCeEEeeeCC--C-CCCCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEc
Confidence 11234899988766555554311 1 12777773444444321 1235788888887665555
Q ss_pred Ee
Q psy948 1569 QI 1570 (1576)
Q Consensus 1569 ~~ 1570 (1576)
..
T Consensus 336 ~~ 337 (396)
T 3c5m_A 336 CK 337 (396)
T ss_dssp EE
T ss_pred cC
Confidence 43
No 265
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=88.40 E-value=3.3 Score=52.83 Aligned_cols=128 Identities=6% Similarity=-0.054 Sum_probs=72.7
Q ss_pred cccceeeecccCCcEEEEeeccc-------ceeEEEeecccc-cceeeecccceeeeec-cCCcceeeecCCCCeEEEee
Q psy948 1429 ERRIEALDIDPVDEIIYWVDSYD-------RNIRRSFMLEAQ-KGQVQAGFGQDLGIKS-IGKLTAIAVDWIAHNIYWTV 1499 (1576)
Q Consensus 1429 ~~~i~ald~D~~~~~vYWsD~~~-------~~I~r~~l~~~~-~~~v~~~~~~~~~~~~-~~~p~glAVDwv~~nLYWTD 1499 (1576)
...+.++.+.+..++|+|+.... ..|+...+.+.. ..... .+ ... ...+..+++.+-++ ||++.
T Consensus 187 ~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~-----~l-~~~~~~~~~~~~~spdg~-l~~~~ 259 (662)
T 3azo_A 187 HRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTR-----TL-LGGPEEAIAQAEWAPDGS-LIVAT 259 (662)
T ss_dssp SSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEE-----EE-EEETTBCEEEEEECTTSC-EEEEE
T ss_pred CCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccE-----Ee-CCCCCceEcceEECCCCe-EEEEE
Confidence 34566788899999999876432 468777776311 00110 11 111 23556677766566 77765
Q ss_pred cCCCCCCCCCeEEEEEcCCCceEEEeeCCCC--C------ceEEEEecCCCeEEEEecCCCCcEEEeecCCCCcEEE
Q psy948 1500 SDRSGSKPKGKVMVAHNDGRYRRSLVSENLE--S------PSSIALDPTLGKMFWAETGASPRIESAWMDGSHRSAT 1568 (1576)
Q Consensus 1500 ~~~~~~~~~~~I~v~~ldG~~~~~lv~~~l~--~------P~~IavDp~~G~LYWTD~g~~~~Iera~mDGs~r~~i 1568 (1576)
.. . ...+|.+.++++...+.|+..... . .+.+++.|...++|-... ...+|++.+++|...+.|
T Consensus 260 ~~-~---~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~~~~l 331 (662)
T 3azo_A 260 DR-T---GWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGELVDA 331 (662)
T ss_dssp CT-T---SSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTEEEEC
T ss_pred CC-C---CCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCcEEEe
Confidence 42 1 134788888866555555532211 1 356777776555554444 556888888876554433
No 266
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=88.26 E-value=0.23 Score=41.36 Aligned_cols=34 Identities=24% Similarity=0.617 Sum_probs=25.0
Q ss_pred CCCCccCC-CCccc--cccc--cCCCceEEEcCCCcEec
Q psy948 1355 DVDECATG-IHHCS--QVCT--NLNGTYACSCNAGFTLS 1388 (1576)
Q Consensus 1355 d~neC~~~-~~~Cs--~lC~--n~~gsy~C~Cp~G~~l~ 1388 (1576)
++++|..+ ..+|. ..|+ +..++|+|.||.||++.
T Consensus 2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~ 40 (53)
T 1egf_A 2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGD 40 (53)
T ss_dssp EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSS
T ss_pred CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCC
Confidence 35667642 23674 4798 88899999999999863
No 267
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=86.12 E-value=0.13 Score=42.79 Aligned_cols=42 Identities=26% Similarity=0.407 Sum_probs=27.0
Q ss_pred ceeeccCCceeccCCCccccCCCCccCCCCccccccccCCCceEEEcCCCcEec
Q psy948 1335 YLCTCYQGFIIDKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLS 1388 (1576)
Q Consensus 1335 ~~C~C~~G~~~~~~~~~~c~d~neC~~~~~~Cs~lC~n~~gsy~C~Cp~G~~l~ 1388 (1576)
+.|.|++||. .++|.. .+.|..+=....++|+|.||.||++.
T Consensus 3 ~~C~C~~g~~-----------~~pC~N-GGtC~~~~~~~~~~y~C~C~~Gf~G~ 44 (52)
T 3ca7_A 3 PTYKCPETFD-----------AWYCLN-DAHCFAVKIADLPVYSCECAIGFMGQ 44 (52)
T ss_dssp CCBCCCHHHH-----------HHTSCT-TCEEEEEEETTEEEEEEECCTTEEST
T ss_pred eeeECCCCCc-----------CCcCCC-CCEEecCccCCCCCEEEECCCCCcCC
Confidence 5799999996 245652 23332211114568999999999974
No 268
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=84.65 E-value=11 Score=45.51 Aligned_cols=128 Identities=9% Similarity=0.100 Sum_probs=77.6
Q ss_pred CCeEEEEeccCCc-eEecccc--cCCcceEEE--eCCcceEEEecC----CCcCeEEEEecCCCCcE--EEEeccC----
Q psy948 1174 SIKLDVAELDGTN-RKTLKTA--IQDPRGITL--HPGIGYVYFSSW----NLQAYIGKIGMDGSNFT--RILTHED---- 1238 (1576)
Q Consensus 1174 ~~~I~v~~ldG~~-r~~l~~~--l~~P~~iav--dP~~g~lywtd~----g~~~~I~ra~mdGs~~~--~iv~~~~---- 1238 (1576)
..+|.|.+++... ..+|.-+ -..|+.|++ +|...++|.+.. .....|.+...++...+ +++....
T Consensus 227 ~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~ 306 (462)
T 2ece_A 227 GNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLE 306 (462)
T ss_dssp CCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECC
T ss_pred CCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCcccc
Confidence 5778888887531 1222211 146888877 999999998764 12345554444431111 1111111
Q ss_pred -C-----------CCCcceEEEeccCCeEEEEcCCCCeEEEEeCC-CCceEEEE---eCCC--------------cccee
Q psy948 1239 -D-----------IAWPNALTLDYFTERLYWADAHLDYIASVDLD-GKHKHIVI---SGQK--------------VPHVF 1288 (1576)
Q Consensus 1239 -~-----------l~~P~gLaiD~~~~rlYw~D~~~~~I~s~~~d-G~~r~~v~---~~~~--------------~~~P~ 1288 (1576)
. -..|.+|+|....+.||.+....+.|...++. ....+++. .+.. .++-+
T Consensus 307 ~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~ 386 (462)
T 2ece_A 307 GNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQML 386 (462)
T ss_dssp SSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCE
T ss_pred ccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEE
Confidence 0 24689999999999999999999999999985 33333332 1111 13334
Q ss_pred EEeeeCCeEEEec
Q psy948 1289 ALTLFEDHIYWTD 1301 (1576)
Q Consensus 1289 ~lavfed~lYwtd 1301 (1576)
.|+-.+.+||++.
T Consensus 387 ~lSpDGk~LyVaN 399 (462)
T 2ece_A 387 EISRDGRRVYVTN 399 (462)
T ss_dssp EECTTSSEEEEEC
T ss_pred EEcCCCCEEEEEc
Confidence 4444688999998
No 269
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=84.06 E-value=0.67 Score=37.04 Aligned_cols=21 Identities=24% Similarity=0.597 Sum_probs=17.5
Q ss_pred cccc--cCCCceEEEcCCCcEec
Q psy948 1368 QVCT--NLNGTYACSCNAGFTLS 1388 (1576)
Q Consensus 1368 ~lC~--n~~gsy~C~Cp~G~~l~ 1388 (1576)
..|+ +..++|+|.|++||++.
T Consensus 15 g~C~~~~~~~~~~C~C~~G~~G~ 37 (45)
T 1a3p_A 15 GVXMHIESLDSYTCNCVIGYSGD 37 (45)
T ss_dssp CEEEECTTTSSEEEECCTTEETT
T ss_pred CEEEeecCCCCEEEEcCCCCcCC
Confidence 3676 77899999999999863
No 270
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=83.88 E-value=0.68 Score=43.61 Aligned_cols=61 Identities=21% Similarity=0.404 Sum_probs=48.0
Q ss_pred eeccccc-ccCCCcceeeccCCceeccCCCccccCCCC-ccCCCCccc--cccccC-CCceEEEcCCCcEe
Q psy948 1322 ILHHCMN-ITGGSGYLCTCYQGFIIDKNNAKKCLDVDE-CATGIHHCS--QVCTNL-NGTYACSCNAGFTL 1387 (1576)
Q Consensus 1322 ~~~~c~n-~~g~~~~~C~C~~G~~~~~~~~~~c~d~ne-C~~~~~~Cs--~lC~n~-~gsy~C~Cp~G~~l 1387 (1576)
..+.|.+ ++|. ..|.|..||..+ +..|.-+|+ |..+||+|. ..|..+ +..-.|.|..||.-
T Consensus 20 ~NA~C~r~~~G~--e~CrCl~gY~~d---g~~Cv~~Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~~ 85 (105)
T 1n1i_A 20 ENAACYRYLDGT--EEWRCLLGFKEV---GGKCVPASITCEENNGGCAPEAECTMDDKKEVECKCTKEGSE 85 (105)
T ss_dssp TTEEEEECTTSC--EEEEECTTEEEC---SSSEEECCCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTCC
T ss_pred CCCCeEECCCCC--EeEEEECCeecc---CCEEEECCcchhhcCCCcCCCcEeEECCCCEEEeECCCCCCc
Confidence 3445665 4554 899999999974 567887799 999999994 689877 47899999999753
No 271
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=82.35 E-value=22 Score=39.97 Aligned_cols=76 Identities=14% Similarity=0.040 Sum_probs=39.4
Q ss_pred CcceeeecCCCCeEEEeecCCCCCCCCCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEecCCCCcEEEeecC
Q psy948 1482 KLTAIAVDWIAHNIYWTVSDRSGSKPKGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAETGASPRIESAWMD 1561 (1576)
Q Consensus 1482 ~p~glAVDwv~~nLYWTD~~~~~~~~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~mD 1561 (1576)
.|.+++++. .+++++++.. .++|.+.+++|+....+-. -..|.++++.+ .|.++.++.+.+ +|...+.+
T Consensus 126 ~~~~v~~~~-~G~~lv~~~~------~~~v~~~d~~G~~~w~~~~--~~~~~~~~~~~-~g~~~v~~~~~~-~v~~~d~~ 194 (276)
T 3no2_A 126 QFRQINKNK-KGNYLVPLFA------TSEVREIAPNGQLLNSVKL--SGTPFSSAFLD-NGDCLVACGDAH-CFVQLNLE 194 (276)
T ss_dssp SCSCCEECT-TSCEEEEETT------TTEEEEECTTSCEEEEEEC--SSCCCEEEECT-TSCEEEECBTTS-EEEEECTT
T ss_pred cccCceECC-CCCEEEEecC------CCEEEEECCCCCEEEEEEC--CCCccceeEcC-CCCEEEEeCCCC-eEEEEeCc
Confidence 455666663 4566666653 4667777777654333221 13566666654 344555554322 45555555
Q ss_pred -CCCcEEE
Q psy948 1562 -GSHRSAT 1568 (1576)
Q Consensus 1562 -Gs~r~~i 1568 (1576)
|+..-.+
T Consensus 195 tG~~~w~~ 202 (276)
T 3no2_A 195 SNRIVRRV 202 (276)
T ss_dssp TCCEEEEE
T ss_pred CCcEEEEe
Confidence 5443333
No 272
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=82.01 E-value=22 Score=39.92 Aligned_cols=138 Identities=9% Similarity=0.024 Sum_probs=82.5
Q ss_pred CeEEEEeccCCceEeccccc-CCcceEEEeCCcceEEEecCCCcCeEEEEecCCCCcEEEEecc---CCCCCcceEEEec
Q psy948 1175 IKLDVAELDGTNRKTLKTAI-QDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHE---DDIAWPNALTLDY 1250 (1576)
Q Consensus 1175 ~~I~v~~ldG~~r~~l~~~l-~~P~~iavdP~~g~lywtd~g~~~~I~ra~mdGs~~~~iv~~~---~~l~~P~gLaiD~ 1250 (1576)
..|.+.+.+|.....+...- ....++++.| .|.++.++.+...+|.....+|....++.... ....+|.+++++.
T Consensus 56 ~~V~~~d~~G~~~W~~~~~~~~~~~~~~~~~-dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~ 134 (276)
T 3no2_A 56 KGAKMITRDGRELWNIAAPAGCEMQTARILP-DGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNK 134 (276)
T ss_dssp SEEEEECTTSCEEEEEECCTTCEEEEEEECT-TSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECT
T ss_pred CCEEEECCCCCEEEEEcCCCCccccccEECC-CCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECC
Confidence 44555555554433332211 1233445544 45555555553456666666776544443221 1224677777765
Q ss_pred cCCeEEEEcCCCCeEEEEeCCCCceEEEEeCCCccceeEEeee-CCeEEEeccCCCcceeeccccccc
Q psy948 1251 FTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTLF-EDHIYWTDWNTKSINRADKFNARE 1317 (1576)
Q Consensus 1251 ~~~rlYw~D~~~~~I~s~~~dG~~r~~v~~~~~~~~P~~lavf-ed~lYwtd~~~~~i~~~~k~~~~~ 1317 (1576)
++.+++++....+|..++.+|+....+... ..|+++.+. .+.++.++.....|..++..+|+.
T Consensus 135 -~G~~lv~~~~~~~v~~~d~~G~~~w~~~~~---~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 135 -KGNYLVPLFATSEVREIAPNGQLLNSVKLS---GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRI 198 (276)
T ss_dssp -TSCEEEEETTTTEEEEECTTSCEEEEEECS---SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCE
T ss_pred -CCCEEEEecCCCEEEEECCCCCEEEEEECC---CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcE
Confidence 556778888889999999998766655432 457777765 568888888877788777765543
No 273
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=79.91 E-value=0.66 Score=40.05 Aligned_cols=30 Identities=27% Similarity=0.715 Sum_probs=22.8
Q ss_pred ccccccCCCcccc--ccee-----CCCeeeeecCCCcccC
Q psy948 1078 DECAKVETNQCGH--KCVD-----TLTGYYCECNTGYNDD 1110 (1576)
Q Consensus 1078 dEC~~~~~~~Csq--~C~N-----t~Gsy~C~C~~Gy~l~ 1110 (1576)
|||.. ++|.+ .|++ +.++|+|.|++||.+.
T Consensus 7 ~~C~~---~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~ 43 (63)
T 1hae_A 7 AEKEK---TFCVNGGECFMVKDLSNPSRYLCKCQPGFTGA 43 (63)
T ss_dssp CHHHH---TTSCTTCEEEEEESSSSSCCEEEECCTTEEST
T ss_pred CCCCC---CcCCCCcEEecCCccCCCCCEEEECCCCCcCC
Confidence 56653 55654 7876 6789999999999864
No 274
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=77.90 E-value=0.99 Score=37.52 Aligned_cols=26 Identities=35% Similarity=0.911 Sum_probs=20.0
Q ss_pred CCcccc--cce--eCCCeeeeecCCCcccC
Q psy948 1085 TNQCGH--KCV--DTLTGYYCECNTGYNDD 1110 (1576)
Q Consensus 1085 ~~~Csq--~C~--Nt~Gsy~C~C~~Gy~l~ 1110 (1576)
.++|.+ .|+ +..++|+|.|++||.+.
T Consensus 11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~ 40 (53)
T 1nql_B 11 DGYCLHDGVCMYIEALDKYACNCVVGYIGE 40 (53)
T ss_dssp CCEECTTCEEEEETTTTEEEEEECTTEEST
T ss_pred CCCCCCCeEEeeecCCCCEEEecCCCCcCC
Confidence 345544 576 67889999999999875
No 275
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=77.76 E-value=1.6e+02 Score=37.30 Aligned_cols=58 Identities=10% Similarity=-0.011 Sum_probs=37.0
Q ss_pred CeEEEEeccCCceEeccccc---CCcceEEEeCCcceEEEecCCCcCeEEEEecCCCCcEEEEe
Q psy948 1175 IKLDVAELDGTNRKTLKTAI---QDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILT 1235 (1576)
Q Consensus 1175 ~~I~v~~ldG~~r~~l~~~l---~~P~~iavdP~~g~lywtd~g~~~~I~ra~mdGs~~~~iv~ 1235 (1576)
..|.+.++++...+.|.... ..+..+++.|...+|.+... ..|....+++....++..
T Consensus 91 ~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~---~~i~~~~~~~g~~~~~~~ 151 (723)
T 1xfd_A 91 GYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE---NNIYYCAHVGKQAIRVVS 151 (723)
T ss_dssp SEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET---TEEEEESSSSSCCEEEEC
T ss_pred eeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC---CeEEEEECCCCceEEEec
Confidence 55667777665544443221 22667889998877777654 478888887766655554
No 276
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=77.30 E-value=1.4 Score=41.27 Aligned_cols=59 Identities=19% Similarity=0.527 Sum_probs=45.1
Q ss_pred cccccc-cCCCcceeeccCCceeccCCCccccCC--CCccCCCCccc--cccccCC-----CceEEEcCCCcEe
Q psy948 1324 HHCMNI-TGGSGYLCTCYQGFIIDKNNAKKCLDV--DECATGIHHCS--QVCTNLN-----GTYACSCNAGFTL 1387 (1576)
Q Consensus 1324 ~~c~n~-~g~~~~~C~C~~G~~~~~~~~~~c~d~--neC~~~~~~Cs--~lC~n~~-----gsy~C~Cp~G~~l 1387 (1576)
+.|.+. .+. +.|.|..||..+ +..|.-+ +.|+.+|++|. ..|.... +...|.|..||.-
T Consensus 16 A~C~r~~~g~--e~C~C~~gy~gd---g~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~~ 84 (99)
T 1ob1_C 16 SGCFRHLDER--EECKCLLNYKQE---GDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDSY 84 (99)
T ss_dssp EEEECCTTSC--CEEEECTTEEEE---TTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTCC
T ss_pred CCeEEcCCCC--EEEEecCCeecC---CCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCcc
Confidence 445543 343 899999999975 4677765 69999999994 6898774 6789999999864
No 277
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=77.20 E-value=1.4e+02 Score=36.40 Aligned_cols=118 Identities=13% Similarity=0.071 Sum_probs=64.4
Q ss_pred cccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCCC
Q psy948 1429 ERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPK 1508 (1576)
Q Consensus 1429 ~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~ 1508 (1576)
...+.+|+|.+....|.-. ...+.|+-.+..+ +... . .......+.+||+.+..+.|.-... .
T Consensus 385 ~~~v~~~~~s~dg~~l~~~-~~d~~v~~~~~~~----~~~~----~-~~~~~~~v~~~~~s~d~~~l~~~~~-------d 447 (577)
T 2ymu_A 385 SSSVRGVAFSPDGQTIASA-SDDKTVKLWNRNG----QLLQ----T-LTGHSSSVWGVAFSPDDQTIASASD-------D 447 (577)
T ss_dssp SSCEEEEEECTTSSCEEEE-ETTSEEEEECTTC----CEEE----E-EECCSSCEEEEEECTTSSEEEEEET-------T
T ss_pred CCCeEEEEECCCCCEEEEE-eCCCEEEEEeCCC----CEEE----E-ecCCCCCeEEEEECCCCCEEEEEcC-------C
Confidence 3456677777766555433 2234443322221 1110 0 0111234567888776666655443 3
Q ss_pred CeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEecCCCCcEEEeecCCCCcE
Q psy948 1509 GKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAETGASPRIESAWMDGSHRS 1566 (1576)
Q Consensus 1509 ~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~mDGs~r~ 1566 (1576)
++|.+-+++++..+++. .......+|++.|...+|.-.... ..|.-.+++|....
T Consensus 448 ~~v~~w~~~~~~~~~~~-~~~~~v~~~~~spd~~~las~~~d--~~i~iw~~~~~~~~ 502 (577)
T 2ymu_A 448 KTVKLWNRNGQLLQTLT-GHSSSVRGVAFSPDGQTIASASDD--KTVKLWNRNGQLLQ 502 (577)
T ss_dssp SEEEEEETTSCEEEEEE-CCSSCEEEEEECTTSCEEEEEETT--SEEEEEETTSCEEE
T ss_pred CEEEEEECCCCEEEEEc-CCCCCEEEEEEcCCCCEEEEEeCC--CEEEEEcCCCCEEE
Confidence 68999999887666554 344567899999976666544322 24544455665433
No 278
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=77.07 E-value=79 Score=35.61 Aligned_cols=124 Identities=9% Similarity=-0.013 Sum_probs=66.7
Q ss_pred cccceeeecccCCcEEEEeecc----cceeEEEeecccccceeeeccc---ceeee--eccCCcceeeecCCCCeEEEee
Q psy948 1429 ERRIEALDIDPVDEIIYWVDSY----DRNIRRSFMLEAQKGQVQAGFG---QDLGI--KSIGKLTAIAVDWIAHNIYWTV 1499 (1576)
Q Consensus 1429 ~~~i~ald~D~~~~~vYWsD~~----~~~I~r~~l~~~~~~~v~~~~~---~~~~~--~~~~~p~glAVDwv~~nLYWTD 1499 (1576)
...+.++.|.+....|+.+... .+.|....+............. ..... .+...+..+++....+.|+...
T Consensus 115 ~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 194 (369)
T 3zwl_B 115 PVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGH 194 (369)
T ss_dssp SSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEE
T ss_pred CCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEc
Confidence 3456778888877766654332 1455544444332211111000 00001 1122677888887777776665
Q ss_pred cCCCCCCCCCeEEEEEcCC-CceEEEeeCCCCCceEEEEecCCCeEEEEecCCCCcEEEeecC
Q psy948 1500 SDRSGSKPKGKVMVAHNDG-RYRRSLVSENLESPSSIALDPTLGKMFWAETGASPRIESAWMD 1561 (1576)
Q Consensus 1500 ~~~~~~~~~~~I~v~~ldG-~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~mD 1561 (1576)
. .+.|.+.++.. ......+........+|++.|...+|+-.... ..|...++.
T Consensus 195 ~-------dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--~~i~v~d~~ 248 (369)
T 3zwl_B 195 K-------DGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRD--TNSFLVDVS 248 (369)
T ss_dssp T-------TSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETT--SEEEEEETT
T ss_pred C-------CCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCC--ceEEEEECC
Confidence 4 47899999876 33333344455667899999876555544322 245545544
No 279
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=76.75 E-value=18 Score=46.61 Aligned_cols=124 Identities=12% Similarity=0.088 Sum_probs=73.9
Q ss_pred cccCCcEEEEeecc---cceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCCCCeEEE
Q psy948 1437 IDPVDEIIYWVDSY---DRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPKGKVMV 1513 (1576)
Q Consensus 1437 ~D~~~~~vYWsD~~---~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~~~I~v 1513 (1576)
+.+..++||++... ..+|+++.+.+...... +.++ ..-... +++.+..+.|+++.... ...+|.+
T Consensus 287 ~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~-----~~l~-~~~~~~--~~~s~~g~~lv~~~~~~----g~~~l~~ 354 (693)
T 3iuj_A 287 VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHW-----RDLI-PERQQV--LTVHSGSGYLFAEYMVD----ATARVEQ 354 (693)
T ss_dssp EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGC-----EEEE-CCCSSC--EEEEEETTEEEEEEEET----TEEEEEE
T ss_pred EeccCCEEEEEECCCCCCCEEEEEeCCCCCcccc-----EEEe-cCCCCE--EEEEEECCEEEEEEEEC----CeeEEEE
Confidence 45566778765332 46788888765432111 0111 111111 25566688888886531 1357999
Q ss_pred EEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEec--CCCCcEEEeecCCCCcEEEEecC
Q psy948 1514 AHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAET--GASPRIESAWMDGSHRSATQISN 1572 (1576)
Q Consensus 1514 ~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~--g~~~~Iera~mDGs~r~~i~~~~ 1572 (1576)
.+++|+..+.|.........+++.+|....||++-. ...+.|.+.+|++..+++|...+
T Consensus 355 ~d~~g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l~~~~ 415 (693)
T 3iuj_A 355 FDYEGKRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISLYRASA 415 (693)
T ss_dssp ECTTSCEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEEEECCC
T ss_pred EECCCCeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEEEEeCC
Confidence 999988666554333333445666777777777643 34578999999877777666543
No 280
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=76.70 E-value=0.15 Score=57.17 Aligned_cols=60 Identities=13% Similarity=-0.030 Sum_probs=39.5
Q ss_pred ccccccCCCcceeeccCCceeccC-------------------------CCccccCCCCccCCCCcc--ccccccCCCce
Q psy948 1325 HCMNITGGSGYLCTCYQGFIIDKN-------------------------NAKKCLDVDECATGIHHC--SQVCTNLNGTY 1377 (1576)
Q Consensus 1325 ~c~n~~g~~~~~C~C~~G~~~~~~-------------------------~~~~c~d~neC~~~~~~C--s~lC~n~~gsy 1377 (1576)
.|++..++ |+|.||.||....- .+..|...+||+. .+| ..+|++..++|
T Consensus 45 ~C~~g~~~--y~C~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~pC~nggtc~~G~~c~~~~eC~s--~pC~ngG~C~~~~~sy 120 (267)
T 4fbr_A 45 KTLKGTMT--YNGEGPIGFRGTLSSANNYTVENQWGGTSAPWQPGGVWVLGARDKQNIVAVS--IKSNDGGKTLTGTTTY 120 (267)
T ss_dssp SEEEEEEE--ETTSCCEEEEEEECSTTEEEEEEESSSTTSCEEEEEEEECCCCSSCCEEEEE--EECSSTTSEEEEEEEE
T ss_pred eecCCCCC--eEEeCCCCcccccccccccccccccCcCCCcccCCCeeeccCccccccccCC--CCCCCCCEEecCCccE
Confidence 45565554 99999999975321 1112333444543 334 35777778899
Q ss_pred EEEcCCCcEec
Q psy948 1378 ACSCNAGFTLS 1388 (1576)
Q Consensus 1378 ~C~Cp~G~~l~ 1388 (1576)
+|.||.||++.
T Consensus 121 ~C~C~~Gf~G~ 131 (267)
T 4fbr_A 121 NGEGPIGFKSE 131 (267)
T ss_dssp TTSCCEEEEEE
T ss_pred EeeCCCCcccc
Confidence 99999999985
No 281
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=76.47 E-value=0.9 Score=36.57 Aligned_cols=20 Identities=30% Similarity=0.654 Sum_probs=15.9
Q ss_pred ccccC--CCceEEEcCCCcEec
Q psy948 1369 VCTNL--NGTYACSCNAGFTLS 1388 (1576)
Q Consensus 1369 lC~n~--~gsy~C~Cp~G~~l~ 1388 (1576)
.|+.. .++|+|.|++||++.
T Consensus 18 ~C~~~~~~~~~~C~C~~GytG~ 39 (46)
T 1k36_A 18 QCIYLVDMSQNYCRCEVGYTGV 39 (46)
T ss_dssp EEEEETTTTEEEEEECTTCSST
T ss_pred EeeccCCCCCEEEECCCCCccC
Confidence 67653 378999999999874
No 282
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=76.42 E-value=20 Score=44.79 Aligned_cols=118 Identities=8% Similarity=-0.014 Sum_probs=71.8
Q ss_pred cceeeecccCCcEEEEeec--c--cceeEEEee--cccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCC
Q psy948 1431 RIEALDIDPVDEIIYWVDS--Y--DRNIRRSFM--LEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSG 1504 (1576)
Q Consensus 1431 ~i~ald~D~~~~~vYWsD~--~--~~~I~r~~l--~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~ 1504 (1576)
.+.++.+.+. ..||+++. + ...|+++.+ .+... .+ .....+..+++-+..+.++++...
T Consensus 66 ~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l----------~~~~~~~~~~~s~dg~~~~~~s~~--- 130 (582)
T 3o4h_A 66 SVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RL----------EAVKPMRILSGVDTGEAVVFTGAT--- 130 (582)
T ss_dssp EECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE-EC----------TTSCSBEEEEEEECSSCEEEEEEC---
T ss_pred ccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc-cc----------cCCCCceeeeeCCCCCeEEEEecC---
Confidence 5667788766 78888876 2 225666665 43221 11 111223345666667777776543
Q ss_pred CCCCCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEec--CCCCcEEEeecCCCCcEEEE
Q psy948 1505 SKPKGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAET--GASPRIESAWMDGSHRSATQ 1569 (1576)
Q Consensus 1505 ~~~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~--g~~~~Iera~mDGs~r~~i~ 1569 (1576)
.+.+.+.++++...+.|..... .+++++|.-.+|+++-. +....|.+.++++...+.|.
T Consensus 131 ---~~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~ 191 (582)
T 3o4h_A 131 ---EDRVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFD 191 (582)
T ss_dssp ---SSCEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEEC
T ss_pred ---CCCceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEee
Confidence 2334467887776666654222 78999999888887654 23356999998877666554
No 283
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=76.33 E-value=37 Score=40.39 Aligned_cols=124 Identities=11% Similarity=0.083 Sum_probs=73.2
Q ss_pred cccceeeecccCCcEEEEeecccceeEEEeecccccc-eeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCC
Q psy948 1429 ERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKG-QVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKP 1507 (1576)
Q Consensus 1429 ~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~-~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~ 1507 (1576)
...+.+|++.+....++.+-...+.|.-..+...... .... . ..........+..|++.+..++++.+...
T Consensus 181 ~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~-~-~~~~~~h~~~v~~v~~~p~~~~~l~s~~~------ 252 (430)
T 2xyi_A 181 QKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVID-A-KNIFTGHTAVVEDVAWHLLHESLFGSVAD------ 252 (430)
T ss_dssp SSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEE-C-SEEECCCSSCEEEEEECSSCTTEEEEEET------
T ss_pred CCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceec-c-ceeecCCCCCEeeeEEeCCCCCEEEEEeC------
Confidence 4467888898877645555556677765555432211 1110 0 00111123457788888777888888764
Q ss_pred CCeEEEEEcCCC---ceEEEeeCCCCCceEEEEecCCCeEEEEecCCCCcEEEeecC
Q psy948 1508 KGKVMVAHNDGR---YRRSLVSENLESPSSIALDPTLGKMFWAETGASPRIESAWMD 1561 (1576)
Q Consensus 1508 ~~~I~v~~ldG~---~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~mD 1561 (1576)
.++|.+-++... .....+...-..+++|++.|...+||.+-.. ...|.-.++.
T Consensus 253 dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~-dg~v~vwd~~ 308 (430)
T 2xyi_A 253 DQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSA-DKTVALWDLR 308 (430)
T ss_dssp TSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEET-TSEEEEEETT
T ss_pred CCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeC-CCeEEEEeCC
Confidence 578999998754 2222333455668999999988777766432 2245555544
No 284
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=75.31 E-value=29 Score=40.19 Aligned_cols=126 Identities=11% Similarity=0.029 Sum_probs=65.6
Q ss_pred ccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCCCC
Q psy948 1430 RRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPKG 1509 (1576)
Q Consensus 1430 ~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~~ 1509 (1576)
..+.+|+|.+..+.++.+-...+.|+-.++.......... .....+..||+.+..+++.-+-+. .+
T Consensus 227 ~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~--------~~~~~v~~l~~sp~~~~~lasgs~------D~ 292 (357)
T 4g56_B 227 TIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSA--------VHSQNITGLAYSYHSSPFLASISE------DC 292 (357)
T ss_dssp SCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEEC--------CCSSCEEEEEECSSSSCCEEEEET------TS
T ss_pred ccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEe--------ccceeEEEEEEcCCCCCEEEEEeC------CC
Confidence 3467888888777666665556666555544322211111 112356788887766655444332 36
Q ss_pred eEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEecC-CCCcEEEeecCCCCcEEEEe
Q psy948 1510 KVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAETG-ASPRIESAWMDGSHRSATQI 1570 (1576)
Q Consensus 1510 ~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g-~~~~Iera~mDGs~r~~i~~ 1570 (1576)
+|.+-+++......++ ..-...++|+..|..|.++.|-.. ..-+|+...-.|..+.+|..
T Consensus 293 ~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~~~~~i~~ 353 (357)
T 4g56_B 293 TVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGRTENLIAT 353 (357)
T ss_dssp CEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC-----------
T ss_pred EEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCccccccCC
Confidence 7888887654322222 334556899999987777766432 22244444445666665554
No 285
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=75.14 E-value=1.1e+02 Score=34.32 Aligned_cols=77 Identities=13% Similarity=0.126 Sum_probs=49.1
Q ss_pred CeEEEEeccCCceEecccccCCcceEEEeCCcceEEEecCC---CcCeEEEEecCCCCcEEEEeccCCCCCcceEEEecc
Q psy948 1175 IKLDVAELDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWN---LQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYF 1251 (1576)
Q Consensus 1175 ~~I~v~~ldG~~r~~l~~~l~~P~~iavdP~~g~lywtd~g---~~~~I~ra~mdGs~~~~iv~~~~~l~~P~gLaiD~~ 1251 (1576)
..|.+.++++...+.| .....+++.|...+|++.... ....|....+++...+++.... . ..+++....
T Consensus 43 ~~l~~~d~~~~~~~~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~---~-~~~~~wspd 114 (347)
T 2gop_A 43 NTIVIENLKNNARRFI----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK---N-IRSLEWNED 114 (347)
T ss_dssp EEEEEEETTTCCEEEE----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES---E-EEEEEECTT
T ss_pred ceEEEEeCCCCceEEc----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC---C-ccceeECCC
Confidence 3466666666554444 456678999998888887653 3456888888876555554422 1 556666666
Q ss_pred CCeEEEEc
Q psy948 1252 TERLYWAD 1259 (1576)
Q Consensus 1252 ~~rlYw~D 1259 (1576)
.++|+++.
T Consensus 115 g~~l~~~~ 122 (347)
T 2gop_A 115 SRKLLIVG 122 (347)
T ss_dssp SSEEEEEE
T ss_pred CCEEEEEE
Confidence 66676664
No 286
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=74.29 E-value=32 Score=44.43 Aligned_cols=125 Identities=10% Similarity=-0.003 Sum_probs=73.8
Q ss_pred eeecccCCcEEE-Eee--cccceeEEEeecccccceeeecccceeeeeccCCcce-eeecCCCCeEEEeecCCCCCCCCC
Q psy948 1434 ALDIDPVDEIIY-WVD--SYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTA-IAVDWIAHNIYWTVSDRSGSKPKG 1509 (1576)
Q Consensus 1434 ald~D~~~~~vY-WsD--~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~g-lAVDwv~~nLYWTD~~~~~~~~~~ 1509 (1576)
.+.|.+..+.|+ |+. .+...|+..++++.....+..+. -.+.. +++| ++.||++...........
T Consensus 323 ~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~---------~~v~~~~~~d--~~~i~f~~~~~~~~~~~~ 391 (740)
T 4a5s_A 323 EPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGT---------WEVIGIEALT--SDYLYYISNEYKGMPGGR 391 (740)
T ss_dssp CCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCCSS---------SCEEEEEEEC--SSEEEEEESCGGGCTTCB
T ss_pred CceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecccCC---------EEEEEEEEEe--CCEEEEEEecCCCCCcee
Confidence 566778777776 663 34467888877765443332211 11222 3466 889999975300011246
Q ss_pred eEEEEEcCCCceEEEeeCCC----CCceEEEEecCCCeEEEEecC-CCCcEEEeecCCCCcEEEE
Q psy948 1510 KVMVAHNDGRYRRSLVSENL----ESPSSIALDPTLGKMFWAETG-ASPRIESAWMDGSHRSATQ 1569 (1576)
Q Consensus 1510 ~I~v~~ldG~~~~~lv~~~l----~~P~~IavDp~~G~LYWTD~g-~~~~Iera~mDGs~r~~i~ 1569 (1576)
.|.+++++|...++.+...+ .....+++.|...++..+-.+ ..|.|...++++.....+.
T Consensus 392 ~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~~~~p~~~l~~~~~~~~~~~l 456 (740)
T 4a5s_A 392 NLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVL 456 (740)
T ss_dssp EEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBSSCEEEEEETTTTEEEEEE
T ss_pred EEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEEeCCCCCCEEEEEECCCCcEEEEe
Confidence 79999999976665554333 344678888877765555433 2567777777654443343
No 287
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=72.29 E-value=42 Score=39.88 Aligned_cols=110 Identities=7% Similarity=0.003 Sum_probs=72.0
Q ss_pred cccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCCC
Q psy948 1429 ERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPK 1508 (1576)
Q Consensus 1429 ~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~ 1508 (1576)
...+..|+|.+..+.++.+....+.|+..++.......... .+ ......+..|++.....+||.+-+. .
T Consensus 231 ~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~----~~-~~~~~~v~~i~~~p~~~~~l~tg~~------d 299 (430)
T 2xyi_A 231 TAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSH----TV-DAHTAEVNCLSFNPYSEFILATGSA------D 299 (430)
T ss_dssp SSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSE----EE-ECCSSCEEEEEECSSCTTEEEEEET------T
T ss_pred CCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCccee----Ee-ecCCCCeEEEEeCCCCCCEEEEEeC------C
Confidence 34578899998777888887778888766665432111110 00 1123467889998888888887653 5
Q ss_pred CeEEEEEcCCC-ceEEEeeCCCCCceEEEEecCCCeEEEEec
Q psy948 1509 GKVMVAHNDGR-YRRSLVSENLESPSSIALDPTLGKMFWAET 1549 (1576)
Q Consensus 1509 ~~I~v~~ldG~-~~~~lv~~~l~~P~~IavDp~~G~LYWTD~ 1549 (1576)
++|.+-++... .....+........+|++.|...+|+.+-.
T Consensus 300 g~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~ 341 (430)
T 2xyi_A 300 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG 341 (430)
T ss_dssp SEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEE
T ss_pred CeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEe
Confidence 78999998752 222233344566789999998877777654
No 288
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=72.20 E-value=1.5e+02 Score=34.35 Aligned_cols=101 Identities=9% Similarity=-0.064 Sum_probs=59.4
Q ss_pred ceeeecccCCcEEEEee---cccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCCC
Q psy948 1432 IEALDIDPVDEIIYWVD---SYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPK 1508 (1576)
Q Consensus 1432 i~ald~D~~~~~vYWsD---~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~ 1508 (1576)
+..+.|.+... ++.+- ...+.|...++........ ...+.....+..++++..++.||.+... .
T Consensus 223 ~~~~~~~~~~~-~l~~g~~~~~d~~i~iwd~~~~~~~~~------~~~~~~~~~v~~~~~s~~~~~l~~~g~~------d 289 (402)
T 2aq5_A 223 PVHAVFVSEGK-ILTTGFSRMSERQVALWDTKHLEEPLS------LQELDTSSGVLLPFFDPDTNIVYLCGKG------D 289 (402)
T ss_dssp CCEEEECSTTE-EEEEEECTTCCEEEEEEETTBCSSCSE------EEECCCCSSCEEEEEETTTTEEEEEETT------C
T ss_pred ceEEEEcCCCc-EEEEeccCCCCceEEEEcCccccCCce------EEeccCCCceeEEEEcCCCCEEEEEEcC------C
Confidence 56677776544 33333 3556665555443221000 1111233457789999989999988643 4
Q ss_pred CeEEEEEcCCCc--eEEEee-CCCCCceEEEEecCCCeEE
Q psy948 1509 GKVMVAHNDGRY--RRSLVS-ENLESPSSIALDPTLGKMF 1545 (1576)
Q Consensus 1509 ~~I~v~~ldG~~--~~~lv~-~~l~~P~~IavDp~~G~LY 1545 (1576)
++|.+.++.... ...|.. ..-...++|++.|...++.
T Consensus 290 g~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~ 329 (402)
T 2aq5_A 290 SSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEV 329 (402)
T ss_dssp SCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCG
T ss_pred CeEEEEEecCCCcceEeecccccCCcccceEEecccccce
Confidence 679999887654 333332 2345678999999766554
No 289
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=71.43 E-value=1.3 Score=38.21 Aligned_cols=21 Identities=33% Similarity=0.698 Sum_probs=16.9
Q ss_pred ccccc-----CCCceEEEcCCCcEec
Q psy948 1368 QVCTN-----LNGTYACSCNAGFTLS 1388 (1576)
Q Consensus 1368 ~lC~n-----~~gsy~C~Cp~G~~l~ 1388 (1576)
..|++ ..++|+|.|++||++.
T Consensus 18 G~C~~~~~~~~~~~y~C~C~~Gf~G~ 43 (63)
T 1hae_A 18 GECFMVKDLSNPSRYLCKCQPGFTGA 43 (63)
T ss_dssp CEEEEEESSSSSCCEEEECCTTEEST
T ss_pred cEEecCCccCCCCCEEEECCCCCcCC
Confidence 36764 6789999999999863
No 290
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=71.15 E-value=1.6 Score=45.77 Aligned_cols=33 Identities=27% Similarity=0.798 Sum_probs=27.6
Q ss_pred cCccccccCCCcccc--cceeC-CCeeeeecCCCcccC
Q psy948 1076 NVDECAKVETNQCGH--KCVDT-LTGYYCECNTGYNDD 1110 (1576)
Q Consensus 1076 didEC~~~~~~~Csq--~C~Nt-~Gsy~C~C~~Gy~l~ 1110 (1576)
+|+||.. ..+|.+ .|+|+ +|+|+|.|++||.+.
T Consensus 130 ~~~~C~~--~~~C~~~g~C~~~~~~~~~C~C~~G~~G~ 165 (169)
T 2vj2_A 130 DLNYCGT--HQPCLNGGTCSNTGPDKYQCSCPEGYSGP 165 (169)
T ss_dssp ESCHHHH--TCCCCTTCEEEECSTTCEEEECCTTCCST
T ss_pred CCCCCCC--CCCCCCCCEEcCCCCCCcEeECCCCCcCc
Confidence 4889974 468875 89997 899999999999864
No 291
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=71.00 E-value=1.8 Score=35.88 Aligned_cols=20 Identities=35% Similarity=0.835 Sum_probs=16.8
Q ss_pred ccc--cCCCceEEEcCCCcEec
Q psy948 1369 VCT--NLNGTYACSCNAGFTLS 1388 (1576)
Q Consensus 1369 lC~--n~~gsy~C~Cp~G~~l~ 1388 (1576)
.|+ +..++|+|.||+||++.
T Consensus 19 ~C~~~~~~~~~~C~C~~GytG~ 40 (53)
T 1nql_B 19 VCMYIEALDKYACNCVVGYIGE 40 (53)
T ss_dssp EEEEETTTTEEEEEECTTEEST
T ss_pred EEeeecCCCCEEEecCCCCcCC
Confidence 565 67789999999999974
No 292
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=70.82 E-value=31 Score=42.90 Aligned_cols=108 Identities=18% Similarity=0.224 Sum_probs=65.2
Q ss_pred cccCCcceEEEeCCcceEEEecCCC--------------------cCeEEEEecCCCCc-------EEEEec--------
Q psy948 1192 TAIQDPRGITLHPGIGYVYFSSWNL--------------------QAYIGKIGMDGSNF-------TRILTH-------- 1236 (1576)
Q Consensus 1192 ~~l~~P~~iavdP~~g~lywtd~g~--------------------~~~I~ra~mdGs~~-------~~iv~~-------- 1236 (1576)
+.+.+|-+|+++|..|.||.+--+. ..+|.|...+|.+. ..++..
T Consensus 381 T~mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~ 460 (592)
T 4a9v_A 381 TRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAG 460 (592)
T ss_dssp CCEECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTT
T ss_pred ccccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccccc
Confidence 4567899999999999999973221 14788887765431 222321
Q ss_pred -----------cCCCCCcceEEEeccCCeEEE-EcCCC-----------CeEEEEeCCCCceEEEEeCCCccceeEEeee
Q psy948 1237 -----------EDDIAWPNALTLDYFTERLYW-ADAHL-----------DYIASVDLDGKHKHIVISGQKVPHVFALTLF 1293 (1576)
Q Consensus 1237 -----------~~~l~~P~gLaiD~~~~rlYw-~D~~~-----------~~I~s~~~dG~~r~~v~~~~~~~~P~~lavf 1293 (1576)
...+..|++|++|. .+.||+ .|... +.+..++.+....+.++.......|-+|++.
T Consensus 461 ~~~~g~~~~~~~~~fnsPDnL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafS 539 (592)
T 4a9v_A 461 TPKGGSSNITPQNMFNSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFS 539 (592)
T ss_dssp SGGGCCTTCCTTTCCCCEEEEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEEC
T ss_pred ccccCccCccccCccCCCCceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEEC
Confidence 01378999999996 478999 78642 3555555543333444433333445566554
Q ss_pred --CCeEEEe
Q psy948 1294 --EDHIYWT 1300 (1576)
Q Consensus 1294 --ed~lYwt 1300 (1576)
+..||..
T Consensus 540 PD~ktLfV~ 548 (592)
T 4a9v_A 540 PDQKTLFVG 548 (592)
T ss_dssp TTSSEEEEE
T ss_pred CCCCEEEEE
Confidence 3355544
No 293
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=70.62 E-value=72 Score=36.74 Aligned_cols=107 Identities=9% Similarity=-0.032 Sum_probs=64.8
Q ss_pred ccccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCC
Q psy948 1428 DERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKP 1507 (1576)
Q Consensus 1428 ~~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~ 1507 (1576)
....+.+|+|.+.++.++.+-...+.|.-.++.+.....+ ... ......+..|++.+....|+....
T Consensus 117 h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~-~~~-----~~~~~~v~~~~~~~~~~~l~~~~~------- 183 (383)
T 3ei3_B 117 PGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVF-AKT-----DSWDYWYCCVDVSVSRQMLATGDS------- 183 (383)
T ss_dssp TTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEE-ECC-----CCSSCCEEEEEEETTTTEEEEEET-------
T ss_pred cCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEE-ecc-----CCCCCCeEEEEECCCCCEEEEECC-------
Confidence 3456788888885555555555667776555543111111 000 001234678888887776666554
Q ss_pred CCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEe
Q psy948 1508 KGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAE 1548 (1576)
Q Consensus 1508 ~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD 1548 (1576)
.++|.+-++.++...++. .......+|++.|...+++.+-
T Consensus 184 d~~i~i~d~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~ 223 (383)
T 3ei3_B 184 TGRLLLLGLDGHEIFKEK-LHKAKVTHAEFNPRCDWLMATS 223 (383)
T ss_dssp TSEEEEEETTSCEEEEEE-CSSSCEEEEEECSSCTTEEEEE
T ss_pred CCCEEEEECCCCEEEEec-cCCCcEEEEEECCCCCCEEEEE
Confidence 478999999876555443 4456678999999877444443
No 294
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}
Probab=70.29 E-value=2.1 Score=48.67 Aligned_cols=41 Identities=37% Similarity=0.812 Sum_probs=30.3
Q ss_pred cCccccccC--CCcccccceeCCCeeeeecCCCcccCCCCccc
Q psy948 1076 NVDECAKVE--TNQCGHKCVDTLTGYYCECNTGYNDDDIGTVS 1116 (1576)
Q Consensus 1076 didEC~~~~--~~~Csq~C~Nt~Gsy~C~C~~Gy~l~~~~~~~ 1116 (1576)
+++||.... ...|.|.|.|+.|+|.|+|.+||.|..+...+
T Consensus 120 ~~~~C~~~~~~~~~c~~~C~n~~g~~~C~C~~Gy~l~~d~~~C 162 (278)
T 3dem_A 120 DVDECKEREDEELSCDHYCHNYIGGYYCSCRFGYILHTDNRTC 162 (278)
T ss_dssp ECCTTTC-----CCCSSEEEEETTEEEEECCTTCEECTTSSCE
T ss_pred ccccCCCCCCCcccCCcCcCCccCCcEEEeCCcceeccCCCCC
Confidence 356675421 24899999999999999999999987654433
No 295
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=69.72 E-value=69 Score=36.33 Aligned_cols=122 Identities=7% Similarity=0.000 Sum_probs=65.4
Q ss_pred cccceeeecccC------------CcEEEEeecccceeEEEeecccccc-eeeecccceeeeeccCCcceeeecCCC--C
Q psy948 1429 ERRIEALDIDPV------------DEIIYWVDSYDRNIRRSFMLEAQKG-QVQAGFGQDLGIKSIGKLTAIAVDWIA--H 1493 (1576)
Q Consensus 1429 ~~~i~ald~D~~------------~~~vYWsD~~~~~I~r~~l~~~~~~-~v~~~~~~~~~~~~~~~p~glAVDwv~--~ 1493 (1576)
...+.+++|.+. ++.++.+-...+.|+..++...... .... . .......+..|++.+.. +
T Consensus 147 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----~-~~~h~~~v~~~~~sp~~~~~ 221 (379)
T 3jrp_A 147 AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLES----T-LEGHSDWVRDVAWSPTVLLR 221 (379)
T ss_dssp TTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEE----E-ECCCSSCEEEEEECCCCSSS
T ss_pred CCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEE----E-EecccCcEeEEEECCCCCCC
Confidence 345677777774 3444445445566655444432211 1110 0 00113456788888773 4
Q ss_pred eEEEeecCCCCCCCCCeEEEEEcCCCc---eEEEeeC--CCCCceEEEEecCCCeEEEEecCCCCcEEEeecC
Q psy948 1494 NIYWTVSDRSGSKPKGKVMVAHNDGRY---RRSLVSE--NLESPSSIALDPTLGKMFWAETGASPRIESAWMD 1561 (1576)
Q Consensus 1494 nLYWTD~~~~~~~~~~~I~v~~ldG~~---~~~lv~~--~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~mD 1561 (1576)
++..+-.. .++|.+-++.... ...++.. ......+|++.|...+|+-......-+|+.....
T Consensus 222 ~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 222 SYLASVSQ------DRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp EEEEEEET------TSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEET
T ss_pred CeEEEEeC------CCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCC
Confidence 44444332 3678888876542 3333322 3345578999998877776655444456655543
No 296
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=68.87 E-value=2.1e+02 Score=34.76 Aligned_cols=118 Identities=14% Similarity=0.085 Sum_probs=67.8
Q ss_pred cccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCCC
Q psy948 1429 ERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPK 1508 (1576)
Q Consensus 1429 ~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~ 1508 (1576)
...+.+|+|.+....|.-+ ...++|.-.++.+. .+.. .......+..||+.+..+.|.-... .
T Consensus 426 ~~~v~~~~~s~d~~~l~~~-~~d~~v~~w~~~~~---~~~~------~~~~~~~v~~~~~spd~~~las~~~-------d 488 (577)
T 2ymu_A 426 SSSVWGVAFSPDDQTIASA-SDDKTVKLWNRNGQ---LLQT------LTGHSSSVRGVAFSPDGQTIASASD-------D 488 (577)
T ss_dssp SSCEEEEEECTTSSEEEEE-ETTSEEEEEETTSC---EEEE------EECCSSCEEEEEECTTSCEEEEEET-------T
T ss_pred CCCeEEEEECCCCCEEEEE-cCCCEEEEEECCCC---EEEE------EcCCCCCEEEEEEcCCCCEEEEEeC-------C
Confidence 3456778888776665533 23445543333221 1100 0111245678888877666665543 3
Q ss_pred CeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEecCCCCcEEEeecCCCCcE
Q psy948 1509 GKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAETGASPRIESAWMDGSHRS 1566 (1576)
Q Consensus 1509 ~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~mDGs~r~ 1566 (1576)
++|.+-+++|+..+++. .......+|++.|...+|.-... ...|.-.+++|....
T Consensus 489 ~~i~iw~~~~~~~~~~~-~h~~~v~~l~~s~dg~~l~s~~~--dg~v~lwd~~~~~~~ 543 (577)
T 2ymu_A 489 KTVKLWNRNGQLLQTLT-GHSSSVRGVAFSPDGQTIASASD--DKTVKLWNRNGQLLQ 543 (577)
T ss_dssp SEEEEEETTSCEEEEEE-CCSSCEEEEEECTTSSCEEEEET--TSEEEEECTTSCEEE
T ss_pred CEEEEEcCCCCEEEEEe-CCCCCEEEEEEcCCCCEEEEEEC--cCEEEEEeCCCCEEE
Confidence 68999999888666654 44556789999987666654432 224554556665433
No 297
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=68.43 E-value=61 Score=37.79 Aligned_cols=114 Identities=7% Similarity=-0.109 Sum_probs=63.8
Q ss_pred ccccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCC
Q psy948 1428 DERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKP 1507 (1576)
Q Consensus 1428 ~~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~ 1507 (1576)
....+.+|+|.+..+.++.+-...++|.--++............ ..........+..|++.+.+++++.+-+.
T Consensus 80 h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~-~~~~~~h~~~v~~~~~~p~~~~~l~s~~~------ 152 (402)
T 2aq5_A 80 HTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREP-VITLEGHTKRVGIVAWHPTAQNVLLSAGC------ 152 (402)
T ss_dssp CSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSC-SEEEECCSSCEEEEEECSSBTTEEEEEET------
T ss_pred CCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCc-eEEecCCCCeEEEEEECcCCCCEEEEEcC------
Confidence 34568899999844444445455666655555432110000000 00011123467788888777667777543
Q ss_pred CCeEEEEEcCCCceEEEe--eCCCCCceEEEEecCCCeEEEEe
Q psy948 1508 KGKVMVAHNDGRYRRSLV--SENLESPSSIALDPTLGKMFWAE 1548 (1576)
Q Consensus 1508 ~~~I~v~~ldG~~~~~lv--~~~l~~P~~IavDp~~G~LYWTD 1548 (1576)
.++|.+-++........+ ........+|++.|...+|+-+.
T Consensus 153 dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 195 (402)
T 2aq5_A 153 DNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSC 195 (402)
T ss_dssp TSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEE
T ss_pred CCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEe
Confidence 467999998765444344 34455668999998655555443
No 298
>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens}
Probab=67.82 E-value=12 Score=43.87 Aligned_cols=28 Identities=36% Similarity=0.854 Sum_probs=25.0
Q ss_pred CCcccccceeCCCeeeeecCCCcccCCC
Q psy948 1085 TNQCGHKCVDTLTGYYCECNTGYNDDDI 1112 (1576)
Q Consensus 1085 ~~~Csq~C~Nt~Gsy~C~C~~Gy~l~~~ 1112 (1576)
...|+|.|.|+.|+|.|+|..||.|...
T Consensus 131 ~~~~~~~c~n~~g~~~csC~~g~~l~~~ 158 (361)
T 4aqb_A 131 ELSCDHYCHNYIGGYYCSCRFGYILHTD 158 (361)
T ss_dssp SSCCSSEEEEETTEEEEECCTTCEECTT
T ss_pred CCCCCccCCccCCCceeccCCCeEEecc
Confidence 5679999999999999999999998643
No 299
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1
Probab=67.44 E-value=2.1 Score=48.96 Aligned_cols=39 Identities=38% Similarity=0.811 Sum_probs=28.4
Q ss_pred CccccccC--CCcccccceeCCCeeeeecCCCcccCCCCcc
Q psy948 1077 VDECAKVE--TNQCGHKCVDTLTGYYCECNTGYNDDDIGTV 1115 (1576)
Q Consensus 1077 idEC~~~~--~~~Csq~C~Nt~Gsy~C~C~~Gy~l~~~~~~ 1115 (1576)
++||.... ...|+|.|.|+.|+|.|+|.+||.|......
T Consensus 120 ~~~C~~~~~~~~~c~~~C~n~~g~~~csC~~Gy~L~~d~~~ 160 (286)
T 1nt0_A 120 VDECRTSLGDSVPCDHYCHXYLGGYYCSCRVGYILHQNKHT 160 (286)
T ss_dssp CCTTC-------CCSSEEEEETTEEEEECCTTEEECTTSSC
T ss_pred CCccCCCCCCcccCCCccccccCceEeecCCCceeccCCCC
Confidence 46665321 1359999999999999999999999765433
No 300
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=67.23 E-value=1.2e+02 Score=35.14 Aligned_cols=121 Identities=8% Similarity=-0.084 Sum_probs=71.1
Q ss_pred ccccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCC
Q psy948 1428 DERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKP 1507 (1576)
Q Consensus 1428 ~~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~ 1507 (1576)
....+.+++|.+....|+.. ...+.|+..++........ .......+..|++.+...+|+.+-.+. .
T Consensus 216 ~~~~v~~~~~~~~~~~l~s~-~~d~~v~iwd~~~~~~~~~--------~~~~~~~v~~~~~~p~~~~ll~~~~gs----~ 282 (401)
T 4aez_A 216 HSSEVCGLAWRSDGLQLASG-GNDNVVQIWDARSSIPKFT--------KTNHNAAVKAVAWCPWQSNLLATGGGT----M 282 (401)
T ss_dssp CSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTCSSEEEE--------ECCCSSCCCEEEECTTSTTEEEEECCT----T
T ss_pred CCCCeeEEEEcCCCCEEEEE-eCCCeEEEccCCCCCccEE--------ecCCcceEEEEEECCCCCCEEEEecCC----C
Confidence 34567888888866555443 3455665545443211110 011234678889988888888875421 1
Q ss_pred CCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEecCCCCcEEEeecCC
Q psy948 1508 KGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAETGASPRIESAWMDG 1562 (1576)
Q Consensus 1508 ~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~mDG 1562 (1576)
.+.|.+-++........+. .-....+|++.|...+|+.+-......|.-.++..
T Consensus 283 d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~ 336 (401)
T 4aez_A 283 DKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSS 336 (401)
T ss_dssp TCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEET
T ss_pred CCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCC
Confidence 4789999986554443333 33567899999987777765432334555555544
No 301
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=66.60 E-value=1.6e+02 Score=32.69 Aligned_cols=57 Identities=12% Similarity=0.258 Sum_probs=33.4
Q ss_pred cceeeecCCCCeEEEeecCCCCCCCCCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEec
Q psy948 1483 LTAIAVDWIAHNIYWTVSDRSGSKPKGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAET 1549 (1576)
Q Consensus 1483 p~glAVDwv~~nLYWTD~~~~~~~~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~ 1549 (1576)
+..+++| ..++||.... .+.|.+.+.+|+....+ ...-....++++|+ .|.||....
T Consensus 257 ~~~~~~~-~~g~l~v~t~-------~ggl~~~d~~g~~~~~~-~~~~~~~~~~~~d~-~g~l~~gt~ 313 (330)
T 3hxj_A 257 ESSPVIG-NTDTIYFGSY-------DGHLYAINPDGTEKWNF-ETGSWIIATPVIDE-NGTIYFGTR 313 (330)
T ss_dssp CSCCEEC-TTSCEEEECT-------TCEEEEECTTSCEEEEE-ECSSCCCSCCEECT-TCCEEEECT
T ss_pred cccceEc-CCCeEEEecC-------CCCEEEECCCCcEEEEE-EcCCccccceEEcC-CCEEEEEcC
Confidence 4567776 3567877654 35688777776643332 22233456777775 466766553
No 302
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=66.10 E-value=80 Score=37.58 Aligned_cols=116 Identities=8% Similarity=-0.010 Sum_probs=68.6
Q ss_pred cceeeecccCCcEEEEeecccceeEEEeec--ccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCCC
Q psy948 1431 RIEALDIDPVDEIIYWVDSYDRNIRRSFML--EAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPK 1508 (1576)
Q Consensus 1431 ~i~ald~D~~~~~vYWsD~~~~~I~r~~l~--~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~ 1508 (1576)
.|.+|+|.+....||.+-...+.|.-..+. .......+.. ......+.+|++.+.+..|+-... .
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~------~~~~~~v~~~~~sp~~~~l~~~~~-------~ 170 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKR------FCFSKRPNAISIAEDDTTVIIADK-------F 170 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEE------EECSSCEEEEEECTTSSEEEEEET-------T
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeec------ccCCCCceEEEEcCCCCEEEEEeC-------C
Confidence 578999999988887776667777655554 2221111100 011245678999887777877765 3
Q ss_pred CeEEEEEcCCCceEE----EeeCCCCCceEEEEecC---CCeEEEEecCCCCcEEEeecC
Q psy948 1509 GKVMVAHNDGRYRRS----LVSENLESPSSIALDPT---LGKMFWAETGASPRIESAWMD 1561 (1576)
Q Consensus 1509 ~~I~v~~ldG~~~~~----lv~~~l~~P~~IavDp~---~G~LYWTD~g~~~~Iera~mD 1561 (1576)
+.|.+.++....... .+......+.+|++.|. ..+|+-..... .|...++.
T Consensus 171 g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~--~i~vwd~~ 228 (450)
T 2vdu_B 171 GDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDE--HIKISHYP 228 (450)
T ss_dssp SEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTS--CEEEEEES
T ss_pred CcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCC--cEEEEECC
Confidence 678888875432211 22234456789999997 44555554432 34444444
No 303
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=64.78 E-value=2.5 Score=43.59 Aligned_cols=31 Identities=26% Similarity=0.876 Sum_probs=24.1
Q ss_pred CccccccCCCcccc--cceeCCCeeeeecCCCcccC
Q psy948 1077 VDECAKVETNQCGH--KCVDTLTGYYCECNTGYNDD 1110 (1576)
Q Consensus 1077 idEC~~~~~~~Csq--~C~Nt~Gsy~C~C~~Gy~l~ 1110 (1576)
+++|.. .+|.. .|+++.++|+|.|++||.+.
T Consensus 119 ~~~c~~---~~C~~~g~C~~~~~~~~c~C~~g~~G~ 151 (162)
T 1g1s_A 119 TASCQD---MSCSKQGECLETIGNYTCSCYPGFYGP 151 (162)
T ss_dssp ECCCCT---TGGGGSEEEEECSSSEEEEECTTEEST
T ss_pred eCCCcC---CCCCCCCEEecCCCCceEeCCCCCcCc
Confidence 445542 45654 79999999999999999974
No 304
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=64.33 E-value=80 Score=35.35 Aligned_cols=108 Identities=12% Similarity=-0.047 Sum_probs=53.7
Q ss_pred ccccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCC
Q psy948 1428 DERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKP 1507 (1576)
Q Consensus 1428 ~~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~ 1507 (1576)
....+.+|.|.+ .+.|+ +-...+.|...++.......+.........+.....+.+|++. ...|+-...
T Consensus 100 ~~~~v~~l~~~~-~~~l~-s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~------- 168 (342)
T 1yfq_A 100 ANLGICRICKYG-DDKLI-AASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTN--SSRLIVGMN------- 168 (342)
T ss_dssp CCSCEEEEEEET-TTEEE-EEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEEC--SSEEEEEES-------
T ss_pred CCCceEEEEeCC-CCEEE-EEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEec--CCcEEEEeC-------
Confidence 345677888888 55444 4445666765554431100000000000011122345566665 344555543
Q ss_pred CCeEEEEEcCC-Cc--eEEEeeCCCCCceEEEEec-CCCeEEE
Q psy948 1508 KGKVMVAHNDG-RY--RRSLVSENLESPSSIALDP-TLGKMFW 1546 (1576)
Q Consensus 1508 ~~~I~v~~ldG-~~--~~~lv~~~l~~P~~IavDp-~~G~LYW 1546 (1576)
.+.|.+.++.. .. ...+....-..+++|++.| ...+|+-
T Consensus 169 d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~ 211 (342)
T 1yfq_A 169 NSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYAC 211 (342)
T ss_dssp TTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEE
T ss_pred CCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEE
Confidence 46899998876 22 2223333445678899988 5444433
No 305
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=64.17 E-value=86 Score=35.99 Aligned_cols=105 Identities=10% Similarity=0.084 Sum_probs=58.8
Q ss_pred cccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCC--eEEEeecCCCCCC
Q psy948 1429 ERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAH--NIYWTVSDRSGSK 1506 (1576)
Q Consensus 1429 ~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~--nLYWTD~~~~~~~ 1506 (1576)
...+.+|.|.+..+.++.+-...+.|...++........ +.....+..+++.+.+. ++..+-..
T Consensus 99 ~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 164 (408)
T 4a11_B 99 RYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADV---------FNFEETVYSHHMSPVSTKHCLVAVGTR----- 164 (408)
T ss_dssp SSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEE---------EECSSCEEEEEECSSCSSCCEEEEEES-----
T ss_pred CCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCcccee---------ccCCCceeeeEeecCCCCCcEEEEEcC-----
Confidence 446778888885555555555566665554443221111 11223455666665543 23333322
Q ss_pred CCCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEe
Q psy948 1507 PKGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAE 1548 (1576)
Q Consensus 1507 ~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD 1548 (1576)
.+.|.+.++........+........+|++.|...+|+.+-
T Consensus 165 -~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~ 205 (408)
T 4a11_B 165 -GPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATA 205 (408)
T ss_dssp -SSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEE
T ss_pred -CCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEE
Confidence 46788888865544344444555668999999877665553
No 306
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=63.95 E-value=35 Score=37.25 Aligned_cols=105 Identities=15% Similarity=0.158 Sum_probs=64.1
Q ss_pred ccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCCCC
Q psy948 1430 RRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPKG 1509 (1576)
Q Consensus 1430 ~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~~ 1509 (1576)
.++..|+|+| ++.||-+ ..+.+++...... ..++-.+....+.-.+...=..|.+| ..++||-. + .+
T Consensus 41 ~~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~-~~~~W~~s~t~IG~~Gw~~F~a~~fD-~~G~LYav-~-------dG 107 (236)
T 1tl2_A 41 SNFKFLFLSP-GGELYGV--LNDKIYKGTPPTH-DNDNWMGRAKKIGNGGWNQFQFLFFD-PNGYLYAV-S-------KD 107 (236)
T ss_dssp TTCSEEEECT-TSCEEEE--ETTEEEEESCCCS-TTCCHHHHCEEEECSCGGGCSEEEEC-TTSCEEEE-E-------TT
T ss_pred ccceeEEECC-CccEEEE--eCCeEEEECCCCC-CcccccccccEecccccccceEEEEC-CCCCEEEe-C-------CC
Confidence 4677899999 8889988 6778998765321 11111111111111122234688999 78899988 3 26
Q ss_pred eEEEEEc--CCCc-----eEEEeeCCCCCceEEEEecCCCeEEEEe
Q psy948 1510 KVMVAHN--DGRY-----RRSLVSENLESPSSIALDPTLGKMFWAE 1548 (1576)
Q Consensus 1510 ~I~v~~l--dG~~-----~~~lv~~~l~~P~~IavDp~~G~LYWTD 1548 (1576)
+|.+.+. +|.. -.+|...+...-..|+.+| .|.||=..
T Consensus 108 ~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p-~G~Lyav~ 152 (236)
T 1tl2_A 108 KLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHP-NGYLYAVH 152 (236)
T ss_dssp EEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECT-TSCEEEEE
T ss_pred EEEEeCCCcCCCCceeccccEeccCCCCceEEEEECC-CceEEEEe
Confidence 7877654 2321 1334445556668899998 48888776
No 307
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=62.61 E-value=1.1e+02 Score=34.48 Aligned_cols=116 Identities=9% Similarity=-0.061 Sum_probs=64.8
Q ss_pred ccceeeecccCC---cEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCC
Q psy948 1430 RRIEALDIDPVD---EIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSK 1506 (1576)
Q Consensus 1430 ~~i~ald~D~~~---~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~ 1506 (1576)
..+.+++|.+.. +.++.+-...+.|.-.++......... ......+..|++.+..++++.+-..
T Consensus 70 ~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~--------~~~~~~i~~~~~~~~~~~~l~s~~~----- 136 (366)
T 3k26_A 70 ENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHY--------VGHGNAINELKFHPRDPNLLLSVSK----- 136 (366)
T ss_dssp CCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEE--------ESCCSCEEEEEECSSCTTEEEEEET-----
T ss_pred CcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeee--------cCCCCcEEEEEECCCCCCEEEEEeC-----
Confidence 456777777663 345555555666655444322111111 1123456788887745555555432
Q ss_pred CCCeEEEEEcCCCceEEEe---eCCCCCceEEEEecCCCeEEEEecCCCCcEEEeecC
Q psy948 1507 PKGKVMVAHNDGRYRRSLV---SENLESPSSIALDPTLGKMFWAETGASPRIESAWMD 1561 (1576)
Q Consensus 1507 ~~~~I~v~~ldG~~~~~lv---~~~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~mD 1561 (1576)
.++|.+-++........+ ...-..+.+|++.|...+|+-.... ..|...++.
T Consensus 137 -dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~i~d~~ 191 (366)
T 3k26_A 137 -DHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMD--HSLKLWRIN 191 (366)
T ss_dssp -TSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETT--SCEEEEESC
T ss_pred -CCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCC--CCEEEEECC
Confidence 478999998765444444 3455667899999976666655432 245444443
No 308
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=62.54 E-value=2e+02 Score=33.29 Aligned_cols=116 Identities=10% Similarity=-0.008 Sum_probs=64.2
Q ss_pred ccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCCCC
Q psy948 1430 RRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPKG 1509 (1576)
Q Consensus 1430 ~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~~ 1509 (1576)
..+.++.++. .++.+-...+.|....+..... .+. ......+.+.+|++......|+-... .+
T Consensus 177 ~~v~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~-~~~------~~~~~~~~v~~~~~~~~~~~l~s~~~-------d~ 239 (401)
T 4aez_A 177 ARVGCLSWNR---HVLSSGSRSGAIHHHDVRIANH-QIG------TLQGHSSEVCGLAWRSDGLQLASGGN-------DN 239 (401)
T ss_dssp SCEEEEEEET---TEEEEEETTSEEEEEETTSSSC-EEE------EEECCSSCEEEEEECTTSSEEEEEET-------TS
T ss_pred CceEEEEECC---CEEEEEcCCCCEEEEecccCcc-eee------EEcCCCCCeeEEEEcCCCCEEEEEeC-------CC
Confidence 3456666642 2444444556665544432111 110 01112345678888775544554433 36
Q ss_pred eEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEecC-CCCcEEEeecCC
Q psy948 1510 KVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAETG-ASPRIESAWMDG 1562 (1576)
Q Consensus 1510 ~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g-~~~~Iera~mDG 1562 (1576)
+|.+-++........+........+|++.|....|+.+-.| ....|.-.++..
T Consensus 240 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~ 293 (401)
T 4aez_A 240 VVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAAT 293 (401)
T ss_dssp CEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTT
T ss_pred eEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCC
Confidence 79999987655444444555667899999977777776532 233555555543
No 309
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=61.13 E-value=77 Score=35.96 Aligned_cols=107 Identities=7% Similarity=-0.043 Sum_probs=59.5
Q ss_pred ccccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCC
Q psy948 1428 DERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKP 1507 (1576)
Q Consensus 1428 ~~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~ 1507 (1576)
....+.+|+|.+....|+-+. ..+.|...++.......... .......+..|++....+.|+....
T Consensus 51 h~~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~------~~~~~~~v~~~~~~~~~~~l~~~~~------- 116 (372)
T 1k8k_C 51 HNGQVTGVDWAPDSNRIVTCG-TDRNAYVWTLKGRTWKPTLV------ILRINRAARCVRWAPNEKKFAVGSG------- 116 (372)
T ss_dssp CSSCEEEEEEETTTTEEEEEE-TTSCEEEEEEETTEEEEEEE------CCCCSSCEEEEEECTTSSEEEEEET-------
T ss_pred CCCcccEEEEeCCCCEEEEEc-CCCeEEEEECCCCeeeeeEE------eecCCCceeEEEECCCCCEEEEEeC-------
Confidence 344678888888766665443 45556544443221111100 0112345678888876666666654
Q ss_pred CCeEEEEEcCCCce----EEEeeCCCCCceEEEEecCCCeEEEEe
Q psy948 1508 KGKVMVAHNDGRYR----RSLVSENLESPSSIALDPTLGKMFWAE 1548 (1576)
Q Consensus 1508 ~~~I~v~~ldG~~~----~~lv~~~l~~P~~IavDp~~G~LYWTD 1548 (1576)
.+.|.+-+++.... +.+.........+|++.|...+|+-..
T Consensus 117 d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 161 (372)
T 1k8k_C 117 SRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGS 161 (372)
T ss_dssp TSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEE
T ss_pred CCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEc
Confidence 36788877765542 222223355678999998655555443
No 310
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=59.98 E-value=1.5e+02 Score=33.28 Aligned_cols=101 Identities=13% Similarity=-0.006 Sum_probs=56.2
Q ss_pred ccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCCCC
Q psy948 1430 RRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPKG 1509 (1576)
Q Consensus 1430 ~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~~ 1509 (1576)
..+.+|+|.+....|+- -...+.|+--++........+ ......+..||+.+....|+-... .+
T Consensus 207 ~~v~~l~~spd~~~l~s-~s~dg~i~iwd~~~~~~~~~~--------~~h~~~v~~~~~sp~~~~l~s~s~-------D~ 270 (321)
T 3ow8_A 207 MPIRSLTFSPDSQLLVT-ASDDGYIKIYDVQHANLAGTL--------SGHASWVLNVAFCPDDTHFVSSSS-------DK 270 (321)
T ss_dssp SCCCEEEECTTSCEEEE-ECTTSCEEEEETTTCCEEEEE--------CCCSSCEEEEEECTTSSEEEEEET-------TS
T ss_pred CceeEEEEcCCCCEEEE-EcCCCeEEEEECCCcceeEEE--------cCCCCceEEEEECCCCCEEEEEeC-------CC
Confidence 45678888887665543 334555654444322111111 011234667888776666655443 36
Q ss_pred eEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEE
Q psy948 1510 KVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFW 1546 (1576)
Q Consensus 1510 ~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYW 1546 (1576)
+|.+-++........+........+|++.|...+|.-
T Consensus 271 ~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s 307 (321)
T 3ow8_A 271 SVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVS 307 (321)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred cEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEE
Confidence 7999888655443333344456678888876555543
No 311
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=59.31 E-value=1.5e+02 Score=33.99 Aligned_cols=105 Identities=9% Similarity=0.017 Sum_probs=55.9
Q ss_pred cccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCCC
Q psy948 1429 ERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPK 1508 (1576)
Q Consensus 1429 ~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~ 1508 (1576)
...+.+++|.+....++.+-...++|.--++........+. .......+..+++.+..++++.+-.. .
T Consensus 169 ~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~------~~~~~~~~~~~~~~p~~~~~l~sg~~------d 236 (344)
T 4gqb_B 169 AAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIG------CSAPGYLPTSLAWHPQQSEVFVFGDE------N 236 (344)
T ss_dssp SSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----------CCCEEEEEECSSCTTEEEEEET------T
T ss_pred CCceEEEEecCCCCCceeeeccccccccccccccceeeeee------cceeeccceeeeecCCCCcceEEecc------C
Confidence 34567788877776676666566666544443222111100 00112245677777767777766442 4
Q ss_pred CeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEE
Q psy948 1509 GKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMF 1545 (1576)
Q Consensus 1509 ~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LY 1545 (1576)
++|.+-++........+........+|++.|....+.
T Consensus 237 g~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~l 273 (344)
T 4gqb_B 237 GTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFL 273 (344)
T ss_dssp SEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCE
T ss_pred CcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEE
Confidence 6788887754322222233444557888887654433
No 312
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=57.36 E-value=91 Score=35.17 Aligned_cols=116 Identities=8% Similarity=-0.062 Sum_probs=65.8
Q ss_pred ccceeeecccCCcEEEEeecc----cceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCC
Q psy948 1430 RRIEALDIDPVDEIIYWVDSY----DRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGS 1505 (1576)
Q Consensus 1430 ~~i~ald~D~~~~~vYWsD~~----~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~ 1505 (1576)
..+..+.+.|..++|+++... ...|+...+.+.....+. ..-. +.++++.+-++.|+++...+...
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~---------~~~~-~~~~~wspdg~~l~~~~~~~~~~ 128 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKIL---------EAKN-IRSLEWNEDSRKLLIVGFKRRED 128 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEE---------EESE-EEEEEECTTSSEEEEEEECCCC-
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEE---------cCCC-ccceeECCCCCEEEEEEccCCCc
Confidence 345667888888888876542 334776665543222211 1111 56677766677788875321000
Q ss_pred --------------------CCCCeEEEEEcCCCce-EEEeeCCCCCceEEEEecCCCeEEEEecCC-------CCcEEE
Q psy948 1506 --------------------KPKGKVMVAHNDGRYR-RSLVSENLESPSSIALDPTLGKMFWAETGA-------SPRIES 1557 (1576)
Q Consensus 1506 --------------------~~~~~I~v~~ldG~~~-~~lv~~~l~~P~~IavDp~~G~LYWTD~g~-------~~~Ier 1557 (1576)
.....|.+.++++... +.|.. . ...++++.|.. ++|-+.... ..+|..
T Consensus 129 ~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~--~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~ 204 (347)
T 2gop_A 129 EDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P--RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYI 204 (347)
T ss_dssp --------CCCC---------CEEEEEEEETTTTEEEEEEEE-E--TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEE
T ss_pred CCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C--CcccccCCCCe-EEEEEecccccccccccccEEE
Confidence 0125788888877655 45543 2 67788888865 555553321 336776
Q ss_pred ee
Q psy948 1558 AW 1559 (1576)
Q Consensus 1558 a~ 1559 (1576)
.+
T Consensus 205 ~d 206 (347)
T 2gop_A 205 WE 206 (347)
T ss_dssp EE
T ss_pred eC
Confidence 66
No 313
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=57.19 E-value=2.3e+02 Score=31.16 Aligned_cols=103 Identities=10% Similarity=-0.087 Sum_probs=61.6
Q ss_pred cccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCCC
Q psy948 1429 ERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPK 1508 (1576)
Q Consensus 1429 ~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~ 1508 (1576)
...+.++.|.+....|+... ..+.|+..++........ ......+.+|++....+.|+-... .
T Consensus 224 ~~~v~~~~~s~~~~~l~~~~-~~~~i~~~~~~~~~~~~~---------~~~~~~v~~~~~~~~~~~l~~~~~-------d 286 (337)
T 1gxr_A 224 TSQIFSLGYCPTGEWLAVGM-ESSNVEVLHVNKPDKYQL---------HLHESCVLSLKFAYCGKWFVSTGK-------D 286 (337)
T ss_dssp SSCEEEEEECTTSSEEEEEE-TTSCEEEEETTSSCEEEE---------CCCSSCEEEEEECTTSSEEEEEET-------T
T ss_pred CCceEEEEECCCCCEEEEEc-CCCcEEEEECCCCCeEEE---------cCCccceeEEEECCCCCEEEEecC-------C
Confidence 34567788888777666543 345565555443221110 112345678888876666655443 4
Q ss_pred CeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEec
Q psy948 1509 GKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAET 1549 (1576)
Q Consensus 1509 ~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~ 1549 (1576)
+.|.+-++......... .....+.+|++.|...+|+-...
T Consensus 287 g~i~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~ 326 (337)
T 1gxr_A 287 NLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSG 326 (337)
T ss_dssp SEEEEEETTTCCEEEEE-ECSSCEEEEEECTTSCEEEEEET
T ss_pred CcEEEEECCCCeEEEEe-cCCCcEEEEEECCCCCEEEEecC
Confidence 78999998765444333 34456788999988776665543
No 314
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1
Probab=56.69 E-value=5.2 Score=45.58 Aligned_cols=41 Identities=39% Similarity=0.911 Sum_probs=30.1
Q ss_pred CCCCccCCC---CccccccccCCCceEEEcCCCcEecCCCCCcee
Q psy948 1355 DVDECATGI---HHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCK 1396 (1576)
Q Consensus 1355 d~neC~~~~---~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~ 1396 (1576)
+.++|...+ ..|+|.|.|+.|+|.|.|.+||.|..+.. +|.
T Consensus 119 ~~~~C~~~~~~~~~c~~~C~n~~g~~~csC~~Gy~L~~d~~-~C~ 162 (286)
T 1nt0_A 119 DVDECRTSLGDSVPCDHYCHXYLGGYYCSCRVGYILHQNKH-TCS 162 (286)
T ss_dssp ECCTTC-------CCSSEEEEETTEEEEECCTTEEECTTSS-CEE
T ss_pred cCCccCCCCCCcccCCCccccccCceEeecCCCceeccCCC-Ccc
Confidence 345665433 35999999999999999999999986543 675
No 315
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=55.85 E-value=71 Score=37.86 Aligned_cols=106 Identities=13% Similarity=0.129 Sum_probs=60.3
Q ss_pred ccccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCC
Q psy948 1428 DERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKP 1507 (1576)
Q Consensus 1428 ~~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~ 1507 (1576)
....|.+|.|.|.++.++.+-...++|.--++.+.....+.. .. ........|++......|+-...
T Consensus 163 H~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~l~~g~~------- 229 (435)
T 4e54_B 163 AGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFAS-SD-----TINIWFCSLDVSASSRMVVTGDN------- 229 (435)
T ss_dssp SSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEEC-CS-----SCSCCCCCEEEETTTTEEEEECS-------
T ss_pred CCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEec-cC-----CCCccEEEEEECCCCCEEEEEeC-------
Confidence 345688999998766555565666777554543221111110 00 01123456777765555544333
Q ss_pred CCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEE
Q psy948 1508 KGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWA 1547 (1576)
Q Consensus 1508 ~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWT 1547 (1576)
.+.|.+-+++|+...++ ........+|++.|...+++.+
T Consensus 230 dg~i~~wd~~~~~~~~~-~~h~~~v~~v~~~p~~~~~~~s 268 (435)
T 4e54_B 230 VGNVILLNMDGKELWNL-RMHKKKVTHVALNPCCDWFLAT 268 (435)
T ss_dssp SSBEEEEESSSCBCCCS-BCCSSCEEEEEECTTCSSEEEE
T ss_pred CCcEeeeccCcceeEEE-ecccceEEeeeecCCCceEEEE
Confidence 47899999988643332 2334456788998887766655
No 316
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=55.74 E-value=4e+02 Score=33.54 Aligned_cols=96 Identities=13% Similarity=0.093 Sum_probs=57.0
Q ss_pred CCeEEEEeccCCceEecccccC----CcceEEEeCCcceEEEecCC-------CcCeEEEEecCCCCc---EEEEeccCC
Q psy948 1174 SIKLDVAELDGTNRKTLKTAIQ----DPRGITLHPGIGYVYFSSWN-------LQAYIGKIGMDGSNF---TRILTHEDD 1239 (1576)
Q Consensus 1174 ~~~I~v~~ldG~~r~~l~~~l~----~P~~iavdP~~g~lywtd~g-------~~~~I~ra~mdGs~~---~~iv~~~~~ 1239 (1576)
.++|.+.++.+...+.+...-. ....+++.|...+|..+... ....|...++++... +++
T Consensus 35 d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l------ 108 (719)
T 1z68_A 35 DNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL------ 108 (719)
T ss_dssp TSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC------
T ss_pred CCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec------
Confidence 4566777776655555533211 25788999988888776431 135677777766542 111
Q ss_pred CCCcceEEEeccCCeEEEEcCCCCeEEEEeCCCCceEE
Q psy948 1240 IAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHI 1277 (1576)
Q Consensus 1240 l~~P~gLaiD~~~~rlYw~D~~~~~I~s~~~dG~~r~~ 1277 (1576)
......+++-+..++|.++. .+.|...++.+...+.
T Consensus 109 ~~~~~~~~~SPDG~~la~~~--~~~i~~~~~~~g~~~~ 144 (719)
T 1z68_A 109 PRPIQYLCWSPVGSKLAYVY--QNNIYLKQRPGDPPFQ 144 (719)
T ss_dssp CSSBCCEEECSSTTCEEEEE--TTEEEEESSTTSCCEE
T ss_pred CcccccceECCCCCEEEEEE--CCeEEEEeCCCCCcEE
Confidence 13455667777777776663 3577777776554443
No 317
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}
Probab=55.65 E-value=6 Score=44.78 Aligned_cols=42 Identities=38% Similarity=0.843 Sum_probs=31.5
Q ss_pred CCCCccCC---CCccccccccCCCceEEEcCCCcEecCCCCCceec
Q psy948 1355 DVDECATG---IHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKA 1397 (1576)
Q Consensus 1355 d~neC~~~---~~~Cs~lC~n~~gsy~C~Cp~G~~l~d~~~~~C~~ 1397 (1576)
+.++|... +..|.|.|.|..|++.|.|+.||.|..+.. +|..
T Consensus 120 ~~~~C~~~~~~~~~c~~~C~n~~g~~~C~C~~Gy~l~~d~~-~C~~ 164 (278)
T 3dem_A 120 DVDECKEREDEELSCDHYCHNYIGGYYCSCRFGYILHTDNR-TCRV 164 (278)
T ss_dssp ECCTTTC-----CCCSSEEEEETTEEEEECCTTCEECTTSS-CEEC
T ss_pred ccccCCCCCCCcccCCcCcCCccCCcEEEeCCcceeccCCC-CCcc
Confidence 34566543 348999999999999999999999985543 5763
No 318
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=55.54 E-value=2.8e+02 Score=31.70 Aligned_cols=121 Identities=8% Similarity=0.052 Sum_probs=66.6
Q ss_pred cccceeeecccCCcEEEEeecccc---eeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCC
Q psy948 1429 ERRIEALDIDPVDEIIYWVDSYDR---NIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGS 1505 (1576)
Q Consensus 1429 ~~~i~ald~D~~~~~vYWsD~~~~---~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~ 1505 (1576)
...+.+|+|.+....++.+-...+ .|+..++...... + . .+.......+..|++.+..++++.+-..
T Consensus 214 ~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~-~-~----~~~~~~~~~v~~~~~s~~~~~~l~s~~~---- 283 (416)
T 2pm9_A 214 KQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTP-L-Q----TLNQGHQKGILSLDWCHQDEHLLLSSGR---- 283 (416)
T ss_dssp CCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSC-S-B----CCCSCCSSCEEEEEECSSCSSCEEEEES----
T ss_pred CCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCC-c-E----EeecCccCceeEEEeCCCCCCeEEEEeC----
Confidence 345788889888655555544444 6655555432110 0 0 0000122456778887644555555432
Q ss_pred CCCCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEecCCCCcEEEeecCC
Q psy948 1506 KPKGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAETGASPRIESAWMDG 1562 (1576)
Q Consensus 1506 ~~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~mDG 1562 (1576)
.++|.+-++........+........+|++.|..+.++.+-. ....|.-.++..
T Consensus 284 --dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~-~d~~i~iw~~~~ 337 (416)
T 2pm9_A 284 --DNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACAS-FDNKIEVQTLQN 337 (416)
T ss_dssp --SSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECC-SSSEEEEEESCC
T ss_pred --CCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEe-cCCcEEEEEccC
Confidence 478999888655444444444556779999997645554532 223455555544
No 319
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=55.42 E-value=2.5e+02 Score=31.18 Aligned_cols=110 Identities=13% Similarity=0.002 Sum_probs=60.1
Q ss_pred cccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCC-----
Q psy948 1429 ERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRS----- 1503 (1576)
Q Consensus 1429 ~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~----- 1503 (1576)
...+.+++|.+....|+.+ ...+.|...++....... .+.....+..+++.+..+.|+.......
T Consensus 218 ~~~v~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~---------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 287 (369)
T 3zwl_B 218 EKSISDMQFSPDLTYFITS-SRDTNSFLVDVSTLQVLK---------KYETDCPLNTAVITPLKEFIILGGGQEAKDVTT 287 (369)
T ss_dssp SSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTCCEEE---------EEECSSCEEEEEECSSSSEEEEEECCC------
T ss_pred CCceeEEEECCCCCEEEEe-cCCceEEEEECCCCceee---------eecCCCCceeEEecCCCceEEEeecCCCceEEE
Confidence 4467788888876666544 345566554443221111 1122345677888887777777654210
Q ss_pred --CCCCCCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEe
Q psy948 1504 --GSKPKGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAE 1548 (1576)
Q Consensus 1504 --~~~~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD 1548 (1576)
.......|.+.++........+........+|++.|...+|+-..
T Consensus 288 ~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 334 (369)
T 3zwl_B 288 TSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGG 334 (369)
T ss_dssp -------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred EecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEc
Confidence 000011566666655544444445556678889988655555443
No 320
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=55.31 E-value=2.3e+02 Score=31.77 Aligned_cols=101 Identities=8% Similarity=0.002 Sum_probs=57.7
Q ss_pred ccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeee-ccCCcceeeecCCCCeEEEeecCCCCCCCC
Q psy948 1430 RRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIK-SIGKLTAIAVDWIAHNIYWTVSDRSGSKPK 1508 (1576)
Q Consensus 1430 ~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~-~~~~p~glAVDwv~~nLYWTD~~~~~~~~~ 1508 (1576)
..+.+++|.+....|.-. ...+.|.-.++... +.+. .+. ....+..|++.+..+.|+-... .
T Consensus 165 ~~v~~~~~spdg~~lasg-~~dg~i~iwd~~~~---~~~~------~~~~h~~~v~~l~~spd~~~l~s~s~-------d 227 (321)
T 3ow8_A 165 KFILSIAYSPDGKYLASG-AIDGIINIFDIATG---KLLH------TLEGHAMPIRSLTFSPDSQLLVTASD-------D 227 (321)
T ss_dssp SCEEEEEECTTSSEEEEE-ETTSCEEEEETTTT---EEEE------EECCCSSCCCEEEECTTSCEEEEECT-------T
T ss_pred ceEEEEEECCCCCEEEEE-cCCCeEEEEECCCC---cEEE------EEcccCCceeEEEEcCCCCEEEEEcC-------C
Confidence 346778888777655543 33455544343321 1111 011 1235678898876665654433 3
Q ss_pred CeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEE
Q psy948 1509 GKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWA 1547 (1576)
Q Consensus 1509 ~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWT 1547 (1576)
++|.+-++........+........+|++.|...+|+-.
T Consensus 228 g~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~ 266 (321)
T 3ow8_A 228 GYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSS 266 (321)
T ss_dssp SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEE
Confidence 679998887654444444455566788998876655543
No 321
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=55.19 E-value=4.2e+02 Score=33.68 Aligned_cols=104 Identities=9% Similarity=0.079 Sum_probs=54.0
Q ss_pred eeEEecCCCeEEEEeccCCc-eEecccccCCcceEEEeCCcceEEEecCCCcCeEEEEecCCC-CcEEEEeccCCCCCcc
Q psy948 1167 LCALDVRSIKLDVAELDGTN-RKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGS-NFTRILTHEDDIAWPN 1244 (1576)
Q Consensus 1167 ~~avD~~~~~I~v~~ldG~~-r~~l~~~l~~P~~iavdP~~g~lywtd~g~~~~I~ra~mdGs-~~~~iv~~~~~l~~P~ 1244 (1576)
.+++-...+.|.+.++.... ...+...-...+.|+..|...+|+-.... ..|..-+++.. ....++. ..-....
T Consensus 69 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d--g~i~vw~~~~~~~~~~~~~--~~~~~v~ 144 (814)
T 3mkq_A 69 WIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDD--LTVKLWNWENNWALEQTFE--GHEHFVM 144 (814)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETT--SEEEEEEGGGTSEEEEEEE--CCSSCEE
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCC--CEEEEEECCCCceEEEEEc--CCCCcEE
Confidence 45555556777777765333 33343334556788888887777654422 33444444433 2222222 2334456
Q ss_pred eEEEeccCCeEEEEcCCCCeEEEEeCCCCc
Q psy948 1245 ALTLDYFTERLYWADAHLDYIASVDLDGKH 1274 (1576)
Q Consensus 1245 gLaiD~~~~rlYw~D~~~~~I~s~~~dG~~ 1274 (1576)
.+++....+.++.+-.....|...++....
T Consensus 145 ~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~ 174 (814)
T 3mkq_A 145 CVAFNPKDPSTFASGCLDRTVKVWSLGQST 174 (814)
T ss_dssp EEEEETTEEEEEEEEETTSEEEEEETTCSS
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 666665344444444445566666665443
No 322
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=54.86 E-value=1.7e+02 Score=33.47 Aligned_cols=103 Identities=7% Similarity=-0.055 Sum_probs=59.1
Q ss_pred cceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCCCCe
Q psy948 1431 RIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPKGK 1510 (1576)
Q Consensus 1431 ~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~~~ 1510 (1576)
.+.+++|.+..+.++.+-...++|+--++........+. .....+..|++.+.+.++..+-+. .++
T Consensus 216 ~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~--------~h~~~v~~v~fsp~g~~~lasgs~------D~~ 281 (344)
T 4gqb_B 216 LPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSA--------VHSQCVTGLVFSPHSVPFLASLSE------DCS 281 (344)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEE--------CCSSCEEEEEECSSSSCCEEEEET------TSC
T ss_pred cceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEc--------CCCCCEEEEEEccCCCeEEEEEeC------CCe
Confidence 466788888777776665556666544443222111111 112356788887766665555332 367
Q ss_pred EEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEe
Q psy948 1511 VMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAE 1548 (1576)
Q Consensus 1511 I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD 1548 (1576)
|.+-++....... +.......++|+..|...+|+-|-
T Consensus 282 i~vwd~~~~~~~~-~~~H~~~V~~v~~sp~~~~llas~ 318 (344)
T 4gqb_B 282 LAVLDSSLSELFR-SQAHRDFVRDATWSPLNHSLLTTV 318 (344)
T ss_dssp EEEECTTCCEEEE-ECCCSSCEEEEEECSSSTTEEEEE
T ss_pred EEEEECCCCcEEE-EcCCCCCEEEEEEeCCCCeEEEEE
Confidence 8888776543222 223345568899998877776553
No 323
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=54.26 E-value=82 Score=39.50 Aligned_cols=120 Identities=17% Similarity=0.155 Sum_probs=72.1
Q ss_pred cccceeeecccCCcEEEEeecc---------------------cceeEEEeecccccce------e-ee-ccc-------
Q psy948 1429 ERRIEALDIDPVDEIIYWVDSY---------------------DRNIRRSFMLEAQKGQ------V-QA-GFG------- 1472 (1576)
Q Consensus 1429 ~~~i~ald~D~~~~~vYWsD~~---------------------~~~I~r~~l~~~~~~~------v-~~-~~~------- 1472 (1576)
..++..+.|++.++.||++-.+ .+.|+|....+..... + +. +..
T Consensus 383 f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~~ 462 (592)
T 3zwu_A 383 MDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTP 462 (592)
T ss_dssp EECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSG
T ss_pred EeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCcccccccc
Confidence 4578889999999999987432 2468877654432110 0 00 000
Q ss_pred -----ceeeeeccCCcceeeecCCCCeEEE-eecCCCC-----CCCCCeEEEEEcC-CCceEEEeeCCCCCceEEEEecC
Q psy948 1473 -----QDLGIKSIGKLTAIAVDWIAHNIYW-TVSDRSG-----SKPKGKVMVAHND-GRYRRSLVSENLESPSSIALDPT 1540 (1576)
Q Consensus 1473 -----~~~~~~~~~~p~glAVDwv~~nLYW-TD~~~~~-----~~~~~~I~v~~ld-G~~~~~lv~~~l~~P~~IavDp~ 1540 (1576)
.......+..|.+|+||.-.+ |+. +|.+... ....+.+.+.... |..++.+.-..-.+..|+++.|.
T Consensus 463 ~~~~~~~~~~~~f~~PDNL~fd~~G~-LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspD 541 (592)
T 3zwu_A 463 KGGSSNITPQNMFNSPDGLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPD 541 (592)
T ss_dssp GGCCTTCCTTTCCCCEEEEEECTTCC-EEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTT
T ss_pred cccccccCCCCCccCCcceEECCCCC-EEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCC
Confidence 000011367899999998655 554 4542110 0123567777654 55555555455578889999999
Q ss_pred CCeEEEEec
Q psy948 1541 LGKMFWAET 1549 (1576)
Q Consensus 1541 ~G~LYWTD~ 1549 (1576)
..+||..-.
T Consensus 542 g~tlfvniQ 550 (592)
T 3zwu_A 542 QKTLFVGIQ 550 (592)
T ss_dssp SSEEEEEEE
T ss_pred CCEEEEEEE
Confidence 999998764
No 324
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=52.74 E-value=1e+02 Score=39.67 Aligned_cols=79 Identities=6% Similarity=0.021 Sum_probs=52.4
Q ss_pred cceeeecCCCCeEE-EeecCCCCCCCCCeEEEEEcCCCceEEEeeCCCCCceEE-EEecCCCeEEEEecC--C---CCcE
Q psy948 1483 LTAIAVDWIAHNIY-WTVSDRSGSKPKGKVMVAHNDGRYRRSLVSENLESPSSI-ALDPTLGKMFWAETG--A---SPRI 1555 (1576)
Q Consensus 1483 p~glAVDwv~~nLY-WTD~~~~~~~~~~~I~v~~ldG~~~~~lv~~~l~~P~~I-avDp~~G~LYWTD~g--~---~~~I 1555 (1576)
+..+++-+.++.|+ |... +. ....|.+.+++|+..+.|..... ....+ .+| .++||++-.+ . ...|
T Consensus 321 ~~~p~fspDG~~l~~~~s~-~~---G~~~l~~~~~~~~~~~~lT~g~~-~v~~~~~~d--~~~i~f~~~~~~~~~~~~~l 393 (740)
T 4a5s_A 321 PSEPHFTLDGNSFYKIISN-EE---GYRHICYFQIDKKDCTFITKGTW-EVIGIEALT--SDYLYYISNEYKGMPGGRNL 393 (740)
T ss_dssp CCCCEECTTSSEEEEEEEC-TT---SCEEEEEEETTCSSCEESCCSSS-CEEEEEEEC--SSEEEEEESCGGGCTTCBEE
T ss_pred CCCceEcCCCCEEEEEEEc-CC---CceEEEEEECCCCceEecccCCE-EEEEEEEEe--CCEEEEEEecCCCCCceeEE
Confidence 44667777777776 6632 22 25789999999987776664432 33333 355 7899999765 2 3489
Q ss_pred EEeecCCCCcEEE
Q psy948 1556 ESAWMDGSHRSAT 1568 (1576)
Q Consensus 1556 era~mDGs~r~~i 1568 (1576)
.+.+++|...++.
T Consensus 394 y~v~~~g~~~~~~ 406 (740)
T 4a5s_A 394 YKIQLIDYTKVTC 406 (740)
T ss_dssp EEEETTEEEEEEE
T ss_pred EEEECCCCCccee
Confidence 9999998765433
No 325
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=52.73 E-value=1.8e+02 Score=37.11 Aligned_cols=123 Identities=9% Similarity=0.014 Sum_probs=72.3
Q ss_pred cceeeecccCCcEEEEeecccc----eeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCC-
Q psy948 1431 RIEALDIDPVDEIIYWVDSYDR----NIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGS- 1505 (1576)
Q Consensus 1431 ~i~ald~D~~~~~vYWsD~~~~----~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~- 1505 (1576)
.+.++.+.+..++|.++....+ .|+..++.+...... .+... ...+++.-+-++.||++.......
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~--------~~~~~-~~~~~~wspDg~~l~~~~~~~~~~~ 196 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPD--------VLERV-KFSCMAWTHDGKGMFYNAYPQQDGK 196 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEE--------EEEEE-CSCCEEECTTSSEEEEEECCCCSSC
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcc--------cccCc-ccceEEEEeCCCEEEEEEECCcccc
Confidence 3567788888888877643332 566666554322111 11111 245667666677899886432100
Q ss_pred --------CCCCeEEEEEcCCCc-eEEEeeCCCCC---ceEEEEecCCCeEEEEecCC---CCcEEEeecCC
Q psy948 1506 --------KPKGKVMVAHNDGRY-RRSLVSENLES---PSSIALDPTLGKMFWAETGA---SPRIESAWMDG 1562 (1576)
Q Consensus 1506 --------~~~~~I~v~~ldG~~-~~~lv~~~l~~---P~~IavDp~~G~LYWTD~g~---~~~Iera~mDG 1562 (1576)
.....|.+.++.+.. ..+++...-.. ..++++.|..++|+++-... ...|...++++
T Consensus 197 ~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~ 268 (710)
T 2xdw_A 197 SDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQ 268 (710)
T ss_dssp CSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGG
T ss_pred ccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcc
Confidence 012458888886643 23455443332 46899999999999886522 45788888874
No 326
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=52.40 E-value=1e+02 Score=35.85 Aligned_cols=72 Identities=7% Similarity=-0.068 Sum_probs=45.0
Q ss_pred CCcceeeecCCCCeEEEeecCCCCCCCCCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEecCCCCcEEEeec
Q psy948 1481 GKLTAIAVDWIAHNIYWTVSDRSGSKPKGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAETGASPRIESAWM 1560 (1576)
Q Consensus 1481 ~~p~glAVDwv~~nLYWTD~~~~~~~~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~m 1560 (1576)
..+..|++.+..+.|+-... .++|.+-++........+........+|++.|...+|+-..... .|...++
T Consensus 140 ~~v~~~~~~~~~~~l~s~s~-------d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~--~v~iwd~ 210 (420)
T 3vl1_A 140 SEITKLKFFPSGEALISSSQ-------DMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDG--TIRLWEC 210 (420)
T ss_dssp SCEEEEEECTTSSEEEEEET-------TSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTS--CEEEEET
T ss_pred CccEEEEECCCCCEEEEEeC-------CCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCC--cEEEeEC
Confidence 45678888876665654443 47899999864433333445556678999999877776554322 3444444
Q ss_pred C
Q psy948 1561 D 1561 (1576)
Q Consensus 1561 D 1561 (1576)
.
T Consensus 211 ~ 211 (420)
T 3vl1_A 211 G 211 (420)
T ss_dssp T
T ss_pred C
Confidence 3
No 327
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=51.78 E-value=3.5e+02 Score=31.74 Aligned_cols=60 Identities=5% Similarity=-0.042 Sum_probs=37.1
Q ss_pred CcceeeecCCCCeEEEeecCCCCCCCCCeEEEEEc--CCCc--e-EEEeeCCCCCceEEEEecCCCeEEEEec
Q psy948 1482 KLTAIAVDWIAHNIYWTVSDRSGSKPKGKVMVAHN--DGRY--R-RSLVSENLESPSSIALDPTLGKMFWAET 1549 (1576)
Q Consensus 1482 ~p~glAVDwv~~nLYWTD~~~~~~~~~~~I~v~~l--dG~~--~-~~lv~~~l~~P~~IavDp~~G~LYWTD~ 1549 (1576)
.+.+|++....+.||.+... .+.|.+-++ .... . ...+... ..+.+|++.| .+++.-++.
T Consensus 309 ~v~~i~~~~~~~~l~~~~~~------d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~-~~~~v~~~~ 373 (450)
T 2vdu_B 309 AVSKIIKSKNLPFVAFFVEA------TKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHN-DEFQVTLDN 373 (450)
T ss_dssp CEEEEEECSSSSEEEEEETT------CSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEET-TEEEEEECC
T ss_pred EEEEEEEeCCCCEEEEEECC------CCeEEEEEeccCCCCceeeccEeccC-CceEEEEecC-CcEEEEEec
Confidence 45677887777788877632 478999888 3221 1 1122233 7789999999 444443333
No 328
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=51.74 E-value=2.9e+02 Score=30.83 Aligned_cols=100 Identities=11% Similarity=0.041 Sum_probs=51.1
Q ss_pred cccceeeecccC--CcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCC------------CCe
Q psy948 1429 ERRIEALDIDPV--DEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWI------------AHN 1494 (1576)
Q Consensus 1429 ~~~i~ald~D~~--~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv------------~~n 1494 (1576)
...+.+|+|.+. ...|+ +-...+.|...++......... ........+..|++.+. .++
T Consensus 101 ~~~v~~~~~~~~~~~~~l~-~~~~d~~i~v~d~~~~~~~~~~------~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 173 (379)
T 3jrp_A 101 SASVNSVQWAPHEYGPLLL-VASSDGKVSVVEFKENGTTSPI------IIDAHAIGVNSASWAPATIEEDGEHNGTKESR 173 (379)
T ss_dssp SSCEEEEEECCGGGCSEEE-EEETTSEEEEEECCTTSCCCEE------EEECCTTCEEEEEECCCC----------CTTC
T ss_pred CcceEEEEeCCCCCCCEEE-EecCCCcEEEEecCCCCceeeE------EecCCCCceEEEEEcCccccccccccCCCCCC
Confidence 345778888877 44444 3344566655555433211111 00112234566777664 244
Q ss_pred EEEeecCCCCCCCCCeEEEEEcCCCc-eEEEe---eCCCCCceEEEEecCC
Q psy948 1495 IYWTVSDRSGSKPKGKVMVAHNDGRY-RRSLV---SENLESPSSIALDPTL 1541 (1576)
Q Consensus 1495 LYWTD~~~~~~~~~~~I~v~~ldG~~-~~~lv---~~~l~~P~~IavDp~~ 1541 (1576)
++.+-.. .+.|.+-++.... ...++ ........+|++.|..
T Consensus 174 ~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~ 218 (379)
T 3jrp_A 174 KFVTGGA------DNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTV 218 (379)
T ss_dssp EEEEEET------TSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCC
T ss_pred EEEEEeC------CCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCC
Confidence 4444332 3678888775432 22222 2334556799999983
No 329
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=49.14 E-value=1.6e+02 Score=33.66 Aligned_cols=104 Identities=9% Similarity=-0.008 Sum_probs=53.9
Q ss_pred ccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCCCC
Q psy948 1430 RRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPKG 1509 (1576)
Q Consensus 1430 ~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~~ 1509 (1576)
..+.+|+|.+....++.+-...++|.--++.......... .......+..|++.+..++++.+-.. .+
T Consensus 182 ~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~------~~~~~~~v~~v~~sp~~~~~la~g~~------d~ 249 (357)
T 4g56_B 182 SEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRID------FCASDTIPTSVTWHPEKDDTFACGDE------TG 249 (357)
T ss_dssp SCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCC------CTTCCSCEEEEEECTTSTTEEEEEES------SS
T ss_pred CCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeee------eccccccccchhhhhcccceEEEeec------cc
Confidence 4566777777666566665556666533332211111000 00112345677777667777666432 36
Q ss_pred eEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEE
Q psy948 1510 KVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMF 1545 (1576)
Q Consensus 1510 ~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LY 1545 (1576)
+|.+-++........+........+|++.|..+.|.
T Consensus 250 ~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~l 285 (357)
T 4g56_B 250 NVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFL 285 (357)
T ss_dssp CEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCE
T ss_pred ceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEE
Confidence 688887754333223333334456788877654433
No 330
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=48.11 E-value=1.6e+02 Score=33.75 Aligned_cols=141 Identities=7% Similarity=-0.058 Sum_probs=0.0
Q ss_pred cCCce-EEEEecCCceeeecccc------ccccc-----cccc--------cccceeeecccCCcEEEEeecccceeEEE
Q psy948 1398 NDNKL-TIVYSNGPEIRAYETHK------RRFRD-----VISD--------ERRIEALDIDPVDEIIYWVDSYDRNIRRS 1457 (1576)
Q Consensus 1398 ~~~~~-~ll~s~~~~Ir~i~~~~------~~~~~-----~v~~--------~~~i~ald~D~~~~~vYWsD~~~~~I~r~ 1457 (1576)
..... ++..+....|+...+.. ..... .+.. ...+.+++|.+.. ++.+-...+.|+..
T Consensus 135 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~ 212 (397)
T 1sq9_A 135 RLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQIS 212 (397)
T ss_dssp ---CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEE
T ss_pred CCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEE
Q ss_pred eecccccceeeec-------ccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCCC---CeEEEEEcCCCceEEEeeC
Q psy948 1458 FMLEAQKGQVQAG-------FGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPK---GKVMVAHNDGRYRRSLVSE 1527 (1576)
Q Consensus 1458 ~l~~~~~~~v~~~-------~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~---~~I~v~~ldG~~~~~lv~~ 1527 (1576)
++........... .. .+..|++......|+-... . +.|.+.++........+..
T Consensus 213 d~~~~~~~~~~~~~~~h~~~~~---------~i~~i~~~~~~~~l~~~~~-------d~~~g~i~i~d~~~~~~~~~~~~ 276 (397)
T 1sq9_A 213 ELSTLRPLYNFESQHSMINNSN---------SIRSVKFSPQGSLLAIAHD-------SNSFGCITLYETEFGERIGSLSV 276 (397)
T ss_dssp ETTTTEEEEEEECCC---CCCC---------CEEEEEECSSTTEEEEEEE-------ETTEEEEEEEETTTCCEEEEECB
T ss_pred ECCCCceeEEEeccccccccCC---------ccceEEECCCCCEEEEEec-------CCCCceEEEEECCCCcccceecc
Q ss_pred -------------CCCCceEEEEecCCCeEEEEecCCCCcEE
Q psy948 1528 -------------NLESPSSIALDPTLGKMFWAETGASPRIE 1556 (1576)
Q Consensus 1528 -------------~l~~P~~IavDp~~G~LYWTD~g~~~~Ie 1556 (1576)
.-....+|++.|...+|+-......-+|+
T Consensus 277 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw 318 (397)
T 1sq9_A 277 PTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFW 318 (397)
T ss_dssp C--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEE
T ss_pred CcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEE
No 331
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=47.56 E-value=5.5e+02 Score=32.81 Aligned_cols=70 Identities=9% Similarity=-0.095 Sum_probs=42.0
Q ss_pred CCcceEEEecC--CC-cCeEEEEec---CCC--CcEEEEeccCC---CC--CcceEEEe-ccCCeEEEEcCCC----CeE
Q psy948 1204 PGIGYVYFSSW--NL-QAYIGKIGM---DGS--NFTRILTHEDD---IA--WPNALTLD-YFTERLYWADAHL----DYI 1265 (1576)
Q Consensus 1204 P~~g~lywtd~--g~-~~~I~ra~m---dGs--~~~~iv~~~~~---l~--~P~gLaiD-~~~~rlYw~D~~~----~~I 1265 (1576)
+..+++||+-. +. .+.+.|... +|. .+++++..... .. +-.+.++- ...++|.|+.... ..|
T Consensus 124 ~~g~~~yy~~~~~g~~~~vl~r~~~~~~~~~~~~~~vlld~n~~a~~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l 203 (751)
T 2xe4_A 124 VYGKYRYYTREVKGKPYKIYCRVFTDKEPGDVAAEEVIIDVNQVAEGKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTI 203 (751)
T ss_dssp EETTEEEEEEECTTCCSCEEEEEETTSCTTCTTTCEEEEEHHHHTTTCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEE
T ss_pred EECCEEEEEEECCCCceeEEEEEcCCCCCCCCcCCEEEechhHhccCCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEE
Confidence 56788999743 22 357888876 676 66666654211 12 33456666 6666666554432 248
Q ss_pred EEEeCCCC
Q psy948 1266 ASVDLDGK 1273 (1576)
Q Consensus 1266 ~s~~~dG~ 1273 (1576)
..+++++.
T Consensus 204 ~v~dl~~g 211 (751)
T 2xe4_A 204 EFKRISDP 211 (751)
T ss_dssp EEEETTCT
T ss_pred EEEECCCC
Confidence 88888775
No 332
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=47.10 E-value=3.2e+02 Score=31.36 Aligned_cols=76 Identities=14% Similarity=0.096 Sum_probs=44.2
Q ss_pred ccccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCC
Q psy948 1428 DERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKP 1507 (1576)
Q Consensus 1428 ~~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~ 1507 (1576)
....+.+|+|.+....|+ +-...+.|+.-++........+. .....+..|++.+..+.|+-...
T Consensus 138 h~~~v~~~~~~~~~~~l~-s~s~d~~i~iwd~~~~~~~~~~~--------~h~~~v~~~~~~~~~~~l~s~~~------- 201 (420)
T 3vl1_A 138 HVSEITKLKFFPSGEALI-SSSQDMQLKIWSVKDGSNPRTLI--------GHRATVTDIAIIDRGRNVLSASL------- 201 (420)
T ss_dssp SSSCEEEEEECTTSSEEE-EEETTSEEEEEETTTCCCCEEEE--------CCSSCEEEEEEETTTTEEEEEET-------
T ss_pred ccCccEEEEECCCCCEEE-EEeCCCeEEEEeCCCCcCceEEc--------CCCCcEEEEEEcCCCCEEEEEcC-------
Confidence 345678889988766555 33445666655554322211111 12345678888877666765543
Q ss_pred CCeEEEEEcCCC
Q psy948 1508 KGKVMVAHNDGR 1519 (1576)
Q Consensus 1508 ~~~I~v~~ldG~ 1519 (1576)
.++|.+-++...
T Consensus 202 d~~v~iwd~~~~ 213 (420)
T 3vl1_A 202 DGTIRLWECGTG 213 (420)
T ss_dssp TSCEEEEETTTT
T ss_pred CCcEEEeECCCC
Confidence 367888887644
No 333
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=46.27 E-value=2.8e+02 Score=35.40 Aligned_cols=125 Identities=12% Similarity=0.093 Sum_probs=69.5
Q ss_pred eeeecccCCcEEEEeecc-------------cceeEEEeecccccceeeecccceeeeeccC---CcceeeecCCCCeEE
Q psy948 1433 EALDIDPVDEIIYWVDSY-------------DRNIRRSFMLEAQKGQVQAGFGQDLGIKSIG---KLTAIAVDWIAHNIY 1496 (1576)
Q Consensus 1433 ~ald~D~~~~~vYWsD~~-------------~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~---~p~glAVDwv~~nLY 1496 (1576)
.++.+.+. +.||++... ...|++..+.+..... .+++..-. ...++++..-++.|+
T Consensus 212 ~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~-------~lv~~~~~~~~~~~~~~~SpDG~~l~ 283 (741)
T 1yr2_A 212 SGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSAD-------QPVFATPELPKRGHGASVSSDGRWVV 283 (741)
T ss_dssp CCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGC-------EEEECCTTCTTCEEEEEECTTSCEEE
T ss_pred ccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhC-------EEEeccCCCCeEEEEEEECCCCCEEE
Confidence 46777777 888877432 2246666653222111 11222212 234677777777788
Q ss_pred EeecCCCCCCCCCeEEEEEcCCC--c-eEEEeeCCCCCceEEEEecCCCeEEEEec--CCCCcEEEeecCCC--CcEEEE
Q psy948 1497 WTVSDRSGSKPKGKVMVAHNDGR--Y-RRSLVSENLESPSSIALDPTLGKMFWAET--GASPRIESAWMDGS--HRSATQ 1569 (1576)
Q Consensus 1497 WTD~~~~~~~~~~~I~v~~ldG~--~-~~~lv~~~l~~P~~IavDp~~G~LYWTD~--g~~~~Iera~mDGs--~r~~i~ 1569 (1576)
++-... ......|.+.++++. . .+.|.. ....-... +.|..++||+.-. +...+|.++++++. ..+.|+
T Consensus 284 ~~~~~~--~~~~~~l~~~d~~~~~~~~~~~l~~-~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~ 359 (741)
T 1yr2_A 284 ITSSEG--TDPVNTVHVARVTNGKIGPVTALIP-DLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVV 359 (741)
T ss_dssp EEEECT--TCSCCEEEEEEEETTEECCCEEEEC-SSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEE
T ss_pred EEEEcc--CCCcceEEEEECCCCCCcccEEecC-CCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEe
Confidence 775421 012468999998765 3 445543 22222333 4577777777643 23568999999873 334444
No 334
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=45.13 E-value=7.4 Score=31.97 Aligned_cols=16 Identities=38% Similarity=0.893 Sum_probs=13.7
Q ss_pred CCCeeeeecCCCcccC
Q psy948 1095 TLTGYYCECNTGYNDD 1110 (1576)
Q Consensus 1095 t~Gsy~C~C~~Gy~l~ 1110 (1576)
..++|+|.|++||.+.
T Consensus 29 ~~~~y~C~C~~Gf~G~ 44 (52)
T 3ca7_A 29 DLPVYSCECAIGFMGQ 44 (52)
T ss_dssp TEEEEEEECCTTEEST
T ss_pred CCCCEEEECCCCCcCC
Confidence 4578999999999874
No 335
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=44.00 E-value=3.6e+02 Score=29.55 Aligned_cols=104 Identities=6% Similarity=-0.067 Sum_probs=57.2
Q ss_pred cccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCCC
Q psy948 1429 ERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPK 1508 (1576)
Q Consensus 1429 ~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~ 1508 (1576)
...+.+|+|.+..+.|+-. ...+.|..-++........+. .....+..+++.+....|+-... .
T Consensus 65 ~~~v~~~~~~~~~~~l~s~-~~d~~i~vwd~~~~~~~~~~~--------~~~~~v~~~~~~~~~~~l~s~~~-------d 128 (312)
T 4ery_A 65 KLGISDVAWSSDSNLLVSA-SDDKTLKIWDVSSGKCLKTLK--------GHSNYVFCCNFNPQSNLIVSGSF-------D 128 (312)
T ss_dssp SSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTCCEEEEEE--------CCSSCEEEEEECSSSSEEEEEET-------T
T ss_pred CCceEEEEEcCCCCEEEEE-CCCCEEEEEECCCCcEEEEEc--------CCCCCEEEEEEcCCCCEEEEEeC-------C
Confidence 3456788888876655543 344555544443221111110 11234567788776666665543 3
Q ss_pred CeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEe
Q psy948 1509 GKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAE 1548 (1576)
Q Consensus 1509 ~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD 1548 (1576)
++|.+-++........+........+|++.|...+|+...
T Consensus 129 ~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 168 (312)
T 4ery_A 129 ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSS 168 (312)
T ss_dssp SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEe
Confidence 6788888865443333333344457888888665555443
No 336
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=42.76 E-value=1.3e+02 Score=38.24 Aligned_cols=100 Identities=8% Similarity=0.138 Sum_probs=61.4
Q ss_pred ceeeecccCCcEEEEeecc--------cceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCC
Q psy948 1432 IEALDIDPVDEIIYWVDSY--------DRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRS 1503 (1576)
Q Consensus 1432 i~ald~D~~~~~vYWsD~~--------~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~ 1503 (1576)
+..++|.+..++|.++... .+.|+..++.+... ... .. + ...+..+++-+.++.|.++..
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~---~~~--~~--l--~~~~~~~~~SPDG~~la~~~~--- 129 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEF---VRG--NE--L--PRPIQYLCWSPVGSKLAYVYQ--- 129 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE---CCS--SC--C--CSSBCCEEECSSTTCEEEEET---
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcc---ccc--ee--c--CcccccceECCCCCEEEEEEC---
Confidence 6778888888888776432 35666665544321 000 00 1 134667888888888888742
Q ss_pred CCCCCCeEEEEEcCCCceEEEeeCCC------------------CCceEEEEecCCCeEEEEe
Q psy948 1504 GSKPKGKVMVAHNDGRYRRSLVSENL------------------ESPSSIALDPTLGKMFWAE 1548 (1576)
Q Consensus 1504 ~~~~~~~I~v~~ldG~~~~~lv~~~l------------------~~P~~IavDp~~G~LYWTD 1548 (1576)
++|.+.++++...+.|...+- ....+++..|...+|+++-
T Consensus 130 -----~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~ 187 (719)
T 1z68_A 130 -----NNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAE 187 (719)
T ss_dssp -----TEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEE
T ss_pred -----CeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEE
Confidence 578888887665554442221 2235889999877777654
No 337
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=42.31 E-value=10 Score=38.98 Aligned_cols=21 Identities=38% Similarity=0.816 Sum_probs=18.9
Q ss_pred cccccCCCceEEEcCCCcEec
Q psy948 1368 QVCTNLNGTYACSCNAGFTLS 1388 (1576)
Q Consensus 1368 ~lC~n~~gsy~C~Cp~G~~l~ 1388 (1576)
..|++..++|+|.|++||.+.
T Consensus 131 g~C~~~~~~~~c~C~~g~~G~ 151 (162)
T 1g1s_A 131 GECLETIGNYTCSCYPGFYGP 151 (162)
T ss_dssp EEEEECSSSEEEEECTTEEST
T ss_pred CEEecCCCCceEeCCCCCcCc
Confidence 579999999999999999973
No 338
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=42.11 E-value=11 Score=47.09 Aligned_cols=31 Identities=42% Similarity=1.008 Sum_probs=26.9
Q ss_pred CccccccCCCcccc--ccee-CCCeeeeecC-CCcccC
Q psy948 1077 VDECAKVETNQCGH--KCVD-TLTGYYCECN-TGYNDD 1110 (1576)
Q Consensus 1077 idEC~~~~~~~Csq--~C~N-t~Gsy~C~C~-~Gy~l~ 1110 (1576)
+|||.. ++|.+ .|++ ..++|+|.|+ +||.+.
T Consensus 2 ~d~C~~---~PC~ngG~C~~~~~~~y~C~C~~~G~~G~ 36 (553)
T 1q4g_A 2 VNPCCY---YPCQHQGICVRFGLDRYQCDCTRTGYSGP 36 (553)
T ss_dssp CCGGGG---CCCCTTCEEEEETTTEEEEECTTSSEETT
T ss_pred CCcCCC---CCCCCCCCcCCCCCCceEeeCCCCCcCCC
Confidence 688874 78877 8999 8999999999 999975
No 339
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=40.73 E-value=4.2e+02 Score=33.49 Aligned_cols=123 Identities=11% Similarity=0.146 Sum_probs=69.2
Q ss_pred ceeeecccCCcEEEEeec---ccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCCC
Q psy948 1432 IEALDIDPVDEIIYWVDS---YDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPK 1508 (1576)
Q Consensus 1432 i~ald~D~~~~~vYWsD~---~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~ 1508 (1576)
..++.+.+..+.|+++.. ....|+...+.+...... .+ ......... .+++..+.||++-.. . ...
T Consensus 236 ~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~------~l-~~~~~~~~~-~~~~~g~~l~~~t~~-~--~~~ 304 (693)
T 3iuj_A 236 YVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLL------TV-QGDLDADVS-LVDNKGSTLYLLTNR-D--APN 304 (693)
T ss_dssp EEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCE------EE-ECSSSSCEE-EEEEETTEEEEEECT-T--CTT
T ss_pred EEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceE------EE-eCCCCceEE-EEeccCCEEEEEECC-C--CCC
Confidence 456677777777766533 224676666544321110 00 111111111 255667888877432 1 125
Q ss_pred CeEEEEEcCCCce---EEEeeCCCCCceEEEEecCCCeEEEEec-CCCCcEEEeecCCCCcEEE
Q psy948 1509 GKVMVAHNDGRYR---RSLVSENLESPSSIALDPTLGKMFWAET-GASPRIESAWMDGSHRSAT 1568 (1576)
Q Consensus 1509 ~~I~v~~ldG~~~---~~lv~~~l~~P~~IavDp~~G~LYWTD~-g~~~~Iera~mDGs~r~~i 1568 (1576)
.+|.++++++... ++|+...-.. . .+.|..++|+++.. +..++|...+++|...+.|
T Consensus 305 ~~l~~~d~~~~~~~~~~~l~~~~~~~-~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l 365 (693)
T 3iuj_A 305 RRLVTVDAANPGPAHWRDLIPERQQV-L--TVHSGSGYLFAEYMVDATARVEQFDYEGKRVREV 365 (693)
T ss_dssp CEEEEEETTSCCGGGCEEEECCCSSC-E--EEEEETTEEEEEEEETTEEEEEEECTTSCEEEEE
T ss_pred CEEEEEeCCCCCccccEEEecCCCCE-E--EEEEECCEEEEEEEECCeeEEEEEECCCCeeEEe
Confidence 7899999987544 6666543332 2 66666788888764 3345788888888765444
No 340
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=40.38 E-value=2.5e+02 Score=34.15 Aligned_cols=145 Identities=9% Similarity=-0.001 Sum_probs=0.0
Q ss_pred CceEEEEec-CCceeeeccccccc--cccccccccceeeecccCCcEEEEeecccceeEEEeecccccceeeec-cccee
Q psy948 1400 NKLTIVYSN-GPEIRAYETHKRRF--RDVISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAG-FGQDL 1475 (1576)
Q Consensus 1400 ~~~~ll~s~-~~~Ir~i~~~~~~~--~~~v~~~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~-~~~~~ 1475 (1576)
...+++... ...|+.+.+..... ..+......+.+|+|.+....|.-... .+.|+..++..........+ ..
T Consensus 456 ~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-dg~i~iw~~~~~~~~~~~~~~h~--- 531 (615)
T 1pgu_A 456 QNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDV-MGKILLYDLQSREVKTSRWAFRT--- 531 (615)
T ss_dssp SSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEET-TSCEEEEETTTTEEEECCSCCCS---
T ss_pred CCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCC-CCeEEEeeCCCCcceeEeecCCC---
Q ss_pred eeeccCCcceeeecC----------CCCeEEEeecCCCCCCCCCeEEEEEcCCC-ceEEEeeCCCCCceEEEEecCCCeE
Q psy948 1476 GIKSIGKLTAIAVDW----------IAHNIYWTVSDRSGSKPKGKVMVAHNDGR-YRRSLVSENLESPSSIALDPTLGKM 1544 (1576)
Q Consensus 1476 ~~~~~~~p~glAVDw----------v~~nLYWTD~~~~~~~~~~~I~v~~ldG~-~~~~lv~~~l~~P~~IavDp~~G~L 1544 (1576)
..+..|++.+ ..+.|.-...+ ++|.+-++... .....+........+|++.|... |
T Consensus 532 -----~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~d-------g~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l 598 (615)
T 1pgu_A 532 -----SKINAISWKPAEKGANEEEIEEDLVATGSLD-------TNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-L 598 (615)
T ss_dssp -----SCEEEEEECCCC------CCSCCEEEEEETT-------SCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-E
T ss_pred -----CceeEEEEcCccccccccccCCCEEEEEcCC-------CcEEEEECCCCceechhhhcCccceEEEEEcCCCC-e
Q ss_pred EEEecCCCCcEEEeecC
Q psy948 1545 FWAETGASPRIESAWMD 1561 (1576)
Q Consensus 1545 YWTD~g~~~~Iera~mD 1561 (1576)
+-......-+|+...++
T Consensus 599 ~s~~~d~~v~iw~~~~~ 615 (615)
T 1pgu_A 599 VSSGADACIKRWNVVLE 615 (615)
T ss_dssp EEEETTSCEEEEEEC--
T ss_pred EEecCCceEEEEeeecC
No 341
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=38.79 E-value=3.6e+02 Score=29.34 Aligned_cols=173 Identities=13% Similarity=0.057 Sum_probs=0.0
Q ss_pred ccCCceEEEEecCCceeeeccccc-----cccccccccccceeeecccC-CcEEEEeecccceeEEEeecccccceeeec
Q psy948 1397 ANDNKLTIVYSNGPEIRAYETHKR-----RFRDVISDERRIEALDIDPV-DEIIYWVDSYDRNIRRSFMLEAQKGQVQAG 1470 (1576)
Q Consensus 1397 ~~~~~~~ll~s~~~~Ir~i~~~~~-----~~~~~v~~~~~i~ald~D~~-~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~ 1470 (1576)
......++.-+....|+...+... ....+......+.+|+|.+. .+.++.+-...+.|.--++...........
T Consensus 20 ~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~ 99 (351)
T 3f3f_A 20 DFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRR 99 (351)
T ss_dssp CSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCS
T ss_pred cCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccC
Q ss_pred ccceeeeec-cCCcceeeecCC--CCeEEEeecCCCCCCCCCeEEEEEcCCCceEEEee-------------CCCCCceE
Q psy948 1471 FGQDLGIKS-IGKLTAIAVDWI--AHNIYWTVSDRSGSKPKGKVMVAHNDGRYRRSLVS-------------ENLESPSS 1534 (1576)
Q Consensus 1471 ~~~~~~~~~-~~~p~glAVDwv--~~nLYWTD~~~~~~~~~~~I~v~~ldG~~~~~lv~-------------~~l~~P~~ 1534 (1576)
......+.. ...+.+|++.+. ...|+-...+ ++|.+-++........+. .......+
T Consensus 100 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (351)
T 3f3f_A 100 WNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGND-------GILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFC 172 (351)
T ss_dssp EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-------CEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEE
T ss_pred cceeeeecccCCceeEEEEcCCCCCcEEEEecCC-------CcEEEecCCChHHhccccccccccccccccCCcccceeE
Q ss_pred EEEecC--CCeEEEEecCCCCcEEEeecCCCCcEEEEecCCCCC
Q psy948 1535 IALDPT--LGKMFWAETGASPRIESAWMDGSHRSATQISNRQAP 1576 (1576)
Q Consensus 1535 IavDp~--~G~LYWTD~g~~~~Iera~mDGs~r~~i~~~~~~~P 1576 (1576)
|+..|. .+.++.+-......+.....++..+.+........+
T Consensus 173 ~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 216 (351)
T 3f3f_A 173 LSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSL 216 (351)
T ss_dssp EEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSC
T ss_pred EEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcc
No 342
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=38.67 E-value=12 Score=45.21 Aligned_cols=47 Identities=30% Similarity=0.803 Sum_probs=30.4
Q ss_pred cceeeccCCceeccCCCccccCC-----------CCccCCCCcccc--ccccCCCceEEEcCCCcEec
Q psy948 1334 GYLCTCYQGFIIDKNNAKKCLDV-----------DECATGIHHCSQ--VCTNLNGTYACSCNAGFTLS 1388 (1576)
Q Consensus 1334 ~~~C~C~~G~~~~~~~~~~c~d~-----------neC~~~~~~Cs~--lC~n~~gsy~C~Cp~G~~l~ 1388 (1576)
.+.|.|++||.. ..|... ++|. .+++|.+ .|. +++|+|.|++||++.
T Consensus 215 ~g~C~C~~G~~G-----~~Ce~~C~~g~~g~~C~~~C~-~~~~C~~~g~C~--~~~~~C~C~~G~~G~ 274 (423)
T 2gy5_A 215 TGECICPPGFMG-----RTCEKACELHTFGRTCKERCS-GQEGCKSYVFCL--PDPYGCSCATGWKGL 274 (423)
T ss_dssp TCCEECCTTEES-----TTSCEECCTTEESTTSCEECC-STTTTTTCCEEE--TTTTEEECCBTCBSG
T ss_pred CCcEeCCCCccC-----CCcccccCCCCCCCCcCccCC-CCCCCCCCCEEC--CCCCeEEeCCCcccc
Confidence 389999999974 334321 2343 2344532 342 578999999999875
No 343
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=38.25 E-value=3.2e+02 Score=35.14 Aligned_cols=117 Identities=8% Similarity=-0.006 Sum_probs=65.1
Q ss_pred eeeecccCCcEEEEeecc----cceeEEEeecccccceeeecccceeeeecc--CCcceeeecCCCCeEEEeecCCCCCC
Q psy948 1433 EALDIDPVDEIIYWVDSY----DRNIRRSFMLEAQKGQVQAGFGQDLGIKSI--GKLTAIAVDWIAHNIYWTVSDRSGSK 1506 (1576)
Q Consensus 1433 ~ald~D~~~~~vYWsD~~----~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~--~~p~glAVDwv~~nLYWTD~~~~~~~ 1506 (1576)
.++.+.+..+.||++... ...|++..+.+.....+ +++..- ....++++..-.+.|+|+....
T Consensus 224 ~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~-------lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~---- 292 (751)
T 2xe4_A 224 GEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDV-------CLYEEHNPLFSAFMYKAADTNTLCIGSQSP---- 292 (751)
T ss_dssp SCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCE-------EEEECCCTTCEEEEEECTTSSEEEEEEECS----
T ss_pred eeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcE-------EEEecCCCceEEEEEECCCCCEEEEEecCC----
Confidence 467777778888887542 14688777654322111 111111 1123556666677888886431
Q ss_pred CCCeEEEEEcCCCc--e--EEEeeCCCCCceEEEEe-cCCCeEEEE-ecC--CCCcEEEeecCC
Q psy948 1507 PKGKVMVAHNDGRY--R--RSLVSENLESPSSIALD-PTLGKMFWA-ETG--ASPRIESAWMDG 1562 (1576)
Q Consensus 1507 ~~~~I~v~~ldG~~--~--~~lv~~~l~~P~~IavD-p~~G~LYWT-D~g--~~~~Iera~mDG 1562 (1576)
....|.+.++++.. . +.|+ .....|. ..++ ...++|||+ +.. ...+|.++.+++
T Consensus 293 ~~~~l~~~d~~~~~~~~~~~~l~-~~~~~~~-~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 293 ETAEVHLLDLRKGNAHNTLEIVR-PREKGVR-YDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp SCEEEEEEESSSCTTCCCEEESS-CCCTTCC-EEEEEETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred CCceEEEEECCCCCCCceeEEee-cCCCCce-EEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 25678899987642 2 3333 3333332 2233 335666665 432 456999999984
No 344
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=38.10 E-value=2.6e+02 Score=32.50 Aligned_cols=120 Identities=13% Similarity=0.014 Sum_probs=61.8
Q ss_pred cccceeeecccCCcEEEEeecccceeEEEeeccccc-ceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCC
Q psy948 1429 ERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQK-GQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKP 1507 (1576)
Q Consensus 1429 ~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~-~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~ 1507 (1576)
...+.+|+|.+....|.-+ ..+.|.--++..... ..++...... .......+..|++.+.+.+++.+-+.
T Consensus 177 ~~~v~~~~~~~~~~~l~s~--~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~p~~~~~l~s~~~------ 247 (447)
T 3dw8_B 177 TYHINSISINSDYETYLSA--DDLRINLWHLEITDRSFNIVDIKPAN-MEELTEVITAAEFHPNSCNTFVYSSS------ 247 (447)
T ss_dssp SSCCCEEEECTTSSEEEEE--CSSEEEEEETTEEEEEEEEEECCCSS-GGGCCCCEEEEEECSSCTTEEEEEET------
T ss_pred CcceEEEEEcCCCCEEEEe--CCCeEEEEECCCCCceeeeeeccccc-ccccCcceEEEEECCCCCcEEEEEeC------
Confidence 3457788888866655543 466665544442111 0000000000 00112356788888776344444332
Q ss_pred CCeEEEEEcCCCce----EEEeeCCCC------------CceEEEEecCCCeEEEEecCCCCcEEEeec
Q psy948 1508 KGKVMVAHNDGRYR----RSLVSENLE------------SPSSIALDPTLGKMFWAETGASPRIESAWM 1560 (1576)
Q Consensus 1508 ~~~I~v~~ldG~~~----~~lv~~~l~------------~P~~IavDp~~G~LYWTD~g~~~~Iera~m 1560 (1576)
.++|.+-++..... ..++..... ...+|++.|...+|.-... ..|.-.++
T Consensus 248 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~---~~v~iwd~ 313 (447)
T 3dw8_B 248 KGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY---LSVKVWDL 313 (447)
T ss_dssp TSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES---SEEEEEET
T ss_pred CCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC---CeEEEEeC
Confidence 46799998865543 233333332 5689999996666654443 24444444
No 345
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=36.91 E-value=4.8e+02 Score=29.00 Aligned_cols=119 Identities=8% Similarity=-0.062 Sum_probs=61.3
Q ss_pred cccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCCC
Q psy948 1429 ERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPK 1508 (1576)
Q Consensus 1429 ~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~ 1508 (1576)
...+.+++|.+....|+.+. ..+.|+...+.......+.. .+.......+..|++......|+-... .
T Consensus 96 ~~~v~~~~~~~~~~~l~~~~-~d~~v~i~d~~~~~~~~~~~----~~~~~~~~~i~~~~~~~~~~~l~~~~~-------d 163 (372)
T 1k8k_C 96 NRAARCVRWAPNEKKFAVGS-GSRVISICYFEQENDWWVCK----HIKKPIRSTVLSLDWHPNSVLLAAGSC-------D 163 (372)
T ss_dssp SSCEEEEEECTTSSEEEEEE-TTSSEEEEEEETTTTEEEEE----EECTTCCSCEEEEEECTTSSEEEEEET-------T
T ss_pred CCceeEEEECCCCCEEEEEe-CCCEEEEEEecCCCcceeee----eeecccCCCeeEEEEcCCCCEEEEEcC-------C
Confidence 34577888888777666554 34555444444322111110 000111345678888775555554433 3
Q ss_pred CeEEEEEcC------------------CCceEEEeeCCCCCceEEEEecCCCeEEEEecCCCCcEEEeecC
Q psy948 1509 GKVMVAHND------------------GRYRRSLVSENLESPSSIALDPTLGKMFWAETGASPRIESAWMD 1561 (1576)
Q Consensus 1509 ~~I~v~~ld------------------G~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~mD 1561 (1576)
+.|.+-++. .......+........+|++.|...+|+..... ..|...++.
T Consensus 164 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--~~i~i~d~~ 232 (372)
T 1k8k_C 164 FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHD--STVCLADAD 232 (372)
T ss_dssp SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETT--TEEEEEEGG
T ss_pred CCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCC--CEEEEEECC
Confidence 678888753 111222222334556889999876666555422 245444443
No 346
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=36.89 E-value=4.9e+02 Score=29.83 Aligned_cols=103 Identities=18% Similarity=0.091 Sum_probs=55.3
Q ss_pred cccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCCC
Q psy948 1429 ERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPK 1508 (1576)
Q Consensus 1429 ~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~ 1508 (1576)
...+.+|+|.+....|+ +-...++|..-++.... .. ..+.....+..+++.+..++++.+-+. .
T Consensus 165 ~~~v~~~~~~p~~~~l~-s~s~d~~v~iwd~~~~~---~~------~~~~~~~~v~~~~~~~~~~~~l~~~s~------d 228 (393)
T 1erj_A 165 EQDIYSLDYFPSGDKLV-SGSGDRTVRIWDLRTGQ---CS------LTLSIEDGVTTVAVSPGDGKYIAAGSL------D 228 (393)
T ss_dssp SSCEEEEEECTTSSEEE-EEETTSEEEEEETTTTE---EE------EEEECSSCEEEEEECSTTCCEEEEEET------T
T ss_pred CCCEEEEEEcCCCCEEE-EecCCCcEEEEECCCCe---eE------EEEEcCCCcEEEEEECCCCCEEEEEcC------C
Confidence 34577888888776665 33445566544443211 11 111222356677887755555555432 4
Q ss_pred CeEEEEEcCCCceEEEe-------eCCCCCceEEEEecCCCeEEEE
Q psy948 1509 GKVMVAHNDGRYRRSLV-------SENLESPSSIALDPTLGKMFWA 1547 (1576)
Q Consensus 1509 ~~I~v~~ldG~~~~~lv-------~~~l~~P~~IavDp~~G~LYWT 1547 (1576)
++|.+-++........+ ........+|++.|...+|+-.
T Consensus 229 ~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~ 274 (393)
T 1erj_A 229 RAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSG 274 (393)
T ss_dssp SCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEE
T ss_pred CcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEE
Confidence 67888877544322222 1223446788888876555433
No 347
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=36.86 E-value=4.9e+02 Score=29.14 Aligned_cols=121 Identities=11% Similarity=0.082 Sum_probs=63.1
Q ss_pred cccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCCC
Q psy948 1429 ERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPK 1508 (1576)
Q Consensus 1429 ~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~ 1508 (1576)
...+.+|+|.+....|. +-...++|+--.+........+. +.......+..|++.+....|.-... .
T Consensus 105 ~~~v~~v~~sp~~~~l~-s~s~D~~v~iwd~~~~~~~~~~~-----~~~~h~~~v~~~~~~p~~~~l~s~s~-------d 171 (345)
T 3fm0_A 105 ENEVKSVAWAPSGNLLA-TCSRDKSVWVWEVDEEDEYECVS-----VLNSHTQDVKHVVWHPSQELLASASY-------D 171 (345)
T ss_dssp SSCEEEEEECTTSSEEE-EEETTSCEEEEEECTTSCEEEEE-----EECCCCSCEEEEEECSSSSCEEEEET-------T
T ss_pred CCCceEEEEeCCCCEEE-EEECCCeEEEEECCCCCCeEEEE-----EecCcCCCeEEEEECCCCCEEEEEeC-------C
Confidence 34577888888665554 43445566544444322111110 00011234567777766555554433 3
Q ss_pred CeEEEEEcCCCceE--EEeeCCCCCceEEEEecCCCeEEEEecCCCCcEEEeecCC
Q psy948 1509 GKVMVAHNDGRYRR--SLVSENLESPSSIALDPTLGKMFWAETGASPRIESAWMDG 1562 (1576)
Q Consensus 1509 ~~I~v~~ldG~~~~--~lv~~~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~mDG 1562 (1576)
++|.+-++...... ..+........+|+++|...+|.-......-+|++..+.+
T Consensus 172 ~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~ 227 (345)
T 3fm0_A 172 DTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPG 227 (345)
T ss_dssp SCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTT
T ss_pred CcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCC
Confidence 56777776544222 1233444566899999976666554443344666654433
No 348
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=35.64 E-value=3.5e+02 Score=31.96 Aligned_cols=127 Identities=9% Similarity=-0.049 Sum_probs=68.4
Q ss_pred ccceeeecccCCcEEEE---eecccceeEEEeecccccceeee-cccceee-ee-ccCCcceeeecCCCCeEEEeecCCC
Q psy948 1430 RRIEALDIDPVDEIIYW---VDSYDRNIRRSFMLEAQKGQVQA-GFGQDLG-IK-SIGKLTAIAVDWIAHNIYWTVSDRS 1503 (1576)
Q Consensus 1430 ~~i~ald~D~~~~~vYW---sD~~~~~I~r~~l~~~~~~~v~~-~~~~~~~-~~-~~~~p~glAVDwv~~nLYWTD~~~~ 1503 (1576)
..+.+|+|.+....|+. +-...+.|.--++.....+.... .....+. +. ....+.+|++.+..++++.+-+.
T Consensus 93 ~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~-- 170 (434)
T 2oit_A 93 FPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA-- 170 (434)
T ss_dssp SCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET--
T ss_pred CcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC--
Confidence 35788999988887775 44455666544443321000000 0000000 11 13457788888776777777553
Q ss_pred CCCCCCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEecCCCCcEEEeecCCCC
Q psy948 1504 GSKPKGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAETGASPRIESAWMDGSH 1564 (1576)
Q Consensus 1504 ~~~~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~mDGs~ 1564 (1576)
.++|.+-++............-..+.+|+..|...+|+-... ...|.-.++.|..
T Consensus 171 ----Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~--dg~v~iwd~~~~~ 225 (434)
T 2oit_A 171 ----DGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQ--NGTVVQYLPTLQE 225 (434)
T ss_dssp ----TSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEET--TSCEEEECTTCCE
T ss_pred ----CCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcC--CCcEEEEccCCcc
Confidence 477888888665222112222456789999987444443332 2245555555443
No 349
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=35.45 E-value=4.8 Score=45.06 Aligned_cols=31 Identities=16% Similarity=0.175 Sum_probs=26.0
Q ss_pred CccccccCCCcccc--cceeCCCeeeeecCCCcccC
Q psy948 1077 VDECAKVETNQCGH--KCVDTLTGYYCECNTGYNDD 1110 (1576)
Q Consensus 1077 idEC~~~~~~~Csq--~C~Nt~Gsy~C~C~~Gy~l~ 1110 (1576)
++||+. .+|.. +|++..++|+|.|++||++.
T Consensus 99 ~~eC~s---~pC~ngG~C~~~~~sy~C~C~~Gf~G~ 131 (267)
T 4fbr_A 99 NIVAVS---IKSNDGGKTLTGTTTYNGEGPIGFKSE 131 (267)
T ss_dssp CEEEEE---EECSSTTSEEEEEEEETTSCCEEEEEE
T ss_pred ccccCC---CCCCCCCEEecCCccEEeeCCCCcccc
Confidence 568874 56765 89999999999999999864
No 350
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=35.27 E-value=6.3e+02 Score=31.70 Aligned_cols=125 Identities=9% Similarity=-0.016 Sum_probs=67.9
Q ss_pred eeeecccCCcEEEEeecc------------cceeEEEeecccccceeeecccceeeeecc---CCcceeeecCCCCeEEE
Q psy948 1433 EALDIDPVDEIIYWVDSY------------DRNIRRSFMLEAQKGQVQAGFGQDLGIKSI---GKLTAIAVDWIAHNIYW 1497 (1576)
Q Consensus 1433 ~ald~D~~~~~vYWsD~~------------~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~---~~p~glAVDwv~~nLYW 1497 (1576)
.++++.+..+.||++... ...|++..+.+...... +++..- ....++++..-++.|++
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~-------lv~~~~~~~~~~~~~~~SpDG~~l~~ 243 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDT-------VVHERTGDPTTFLQSDLSRDGKYLFV 243 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCE-------EEECCCCCTTCEEEEEECTTSCCEEE
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhce-------EEEecCCCCEEEEEEEECCCCCEEEE
Confidence 567888888888887542 23477776654322111 111111 23447778877888888
Q ss_pred eecCCCCCCCCCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEecC-CCCcEEEeecCCCCc---EEEE
Q psy948 1498 TVSDRSGSKPKGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAETG-ASPRIESAWMDGSHR---SATQ 1569 (1576)
Q Consensus 1498 TD~~~~~~~~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g-~~~~Iera~mDGs~r---~~i~ 1569 (1576)
+..... ....|.+.+..+...+.|.. ........+. |..+++|.++++ ...+|.++++++... +.|+
T Consensus 244 ~~~~~~---~~~~l~~~~~~~~~~~~l~~-~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~ 314 (695)
T 2bkl_A 244 YILRGW---SENDVYWKRPGEKDFRLLVK-GVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIV 314 (695)
T ss_dssp EEEETT---TEEEEEEECTTCSSCEEEEE-CSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEE
T ss_pred EEeCCC---CceEEEEEcCCCCceEEeec-CCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEe
Confidence 754310 13467777665444455543 2222233333 444444445543 356899999976653 4454
No 351
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=34.99 E-value=5.1e+02 Score=29.45 Aligned_cols=58 Identities=7% Similarity=0.080 Sum_probs=37.9
Q ss_pred CCcceeeecCCCCeEEEeecCCCCCCCCCeEEEEEcCCC-ceEEEeeCCCCCceEEEEecCCCeEE
Q psy948 1481 GKLTAIAVDWIAHNIYWTVSDRSGSKPKGKVMVAHNDGR-YRRSLVSENLESPSSIALDPTLGKMF 1545 (1576)
Q Consensus 1481 ~~p~glAVDwv~~nLYWTD~~~~~~~~~~~I~v~~ldG~-~~~~lv~~~l~~P~~IavDp~~G~LY 1545 (1576)
..+..||+.+.++.|.-... .++|.+-++... ..++++........+|+..|...+|.
T Consensus 270 ~~V~~~~~Spdg~~lasgs~-------D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~la 328 (365)
T 4h5i_A 270 KGITSMDVDMKGELAVLASN-------DNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVA 328 (365)
T ss_dssp SCEEEEEECTTSCEEEEEET-------TSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEE
T ss_pred CCeEeEEECCCCCceEEEcC-------CCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEE
Confidence 35678888887766655443 367999988543 33444444556678999998654443
No 352
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=34.93 E-value=4e+02 Score=30.91 Aligned_cols=57 Identities=7% Similarity=-0.048 Sum_probs=35.9
Q ss_pred CcceeeecCCCCeEEEeecCCCCCCCCCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEE
Q psy948 1482 KLTAIAVDWIAHNIYWTVSDRSGSKPKGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMF 1545 (1576)
Q Consensus 1482 ~p~glAVDwv~~nLYWTD~~~~~~~~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LY 1545 (1576)
.+.+|++....+.|+-... .++|.+-++........+...-....+|++.|...+|.
T Consensus 340 ~v~~v~~~~~g~~l~s~s~-------D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~ 396 (410)
T 1vyh_C 340 WVRGVLFHSGGKFILSCAD-------DKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV 396 (410)
T ss_dssp CEEEEEECSSSSCEEEEET-------TTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEE
T ss_pred cEEEEEEcCCCCEEEEEeC-------CCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEE
Confidence 4678888876666665443 37888888755433333334445567888888655444
No 353
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=34.32 E-value=5.5e+02 Score=28.96 Aligned_cols=103 Identities=11% Similarity=-0.083 Sum_probs=59.4
Q ss_pred cccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCCC
Q psy948 1429 ERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPK 1508 (1576)
Q Consensus 1429 ~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~ 1508 (1576)
...+..|+|.+....|+.+ ...+.|+...+.......... .....+..|++.... ++.+-.. .
T Consensus 247 ~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~--------~~~~~i~~~~~~~~~--~l~~~~~------d 309 (425)
T 1r5m_A 247 HGPISVLEFNDTNKLLLSA-SDDGTLRIWHGGNGNSQNCFY--------GHSQSIVSASWVGDD--KVISCSM------D 309 (425)
T ss_dssp SSCEEEEEEETTTTEEEEE-ETTSCEEEECSSSBSCSEEEC--------CCSSCEEEEEEETTT--EEEEEET------T
T ss_pred CCceEEEEECCCCCEEEEE-cCCCEEEEEECCCCccceEec--------CCCccEEEEEECCCC--EEEEEeC------C
Confidence 3457788888777655543 345566544443322111111 112355677777644 4445432 4
Q ss_pred CeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEe
Q psy948 1509 GKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAE 1548 (1576)
Q Consensus 1509 ~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD 1548 (1576)
+.|.+.++........+......+.+|++.|...+|+-..
T Consensus 310 ~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 349 (425)
T 1r5m_A 310 GSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAF 349 (425)
T ss_dssp SEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEE
T ss_pred CcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEE
Confidence 7899999866544444444556678999999766666554
No 354
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=33.96 E-value=4.2e+02 Score=29.32 Aligned_cols=74 Identities=5% Similarity=0.021 Sum_probs=42.8
Q ss_pred CCcceeeecCCC---CeEEEeecCCCCCCCCCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEecCCCCcEEE
Q psy948 1481 GKLTAIAVDWIA---HNIYWTVSDRSGSKPKGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAETGASPRIES 1557 (1576)
Q Consensus 1481 ~~p~glAVDwv~---~nLYWTD~~~~~~~~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~~~~Ier 1557 (1576)
..+..|++.... ++++.+-.. .++|.+-++........+........+|++.|..+.++.+-.. ...|.-
T Consensus 70 ~~v~~~~~~~~~~~~~~~l~~~~~------dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~-dg~i~i 142 (366)
T 3k26_A 70 ENFYTCAWTYDSNTSHPLLAVAGS------RGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSK-DHALRL 142 (366)
T ss_dssp CCEEEEEEEECTTTCCEEEEEEET------TCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEET-TSCEEE
T ss_pred CcEEEEEeccCCCCCCCEEEEecC------CCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeC-CCeEEE
Confidence 346677776653 344555432 4789988876544444444556667899999955555544322 224555
Q ss_pred eecC
Q psy948 1558 AWMD 1561 (1576)
Q Consensus 1558 a~mD 1561 (1576)
.++.
T Consensus 143 wd~~ 146 (366)
T 3k26_A 143 WNIQ 146 (366)
T ss_dssp EETT
T ss_pred EEee
Confidence 5554
No 355
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=33.91 E-value=2.8e+02 Score=30.58 Aligned_cols=71 Identities=17% Similarity=0.191 Sum_probs=37.8
Q ss_pred CCcceeeecCCCCeEEEeecCCCCCCCCCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEEecCCCCcEEEeec
Q psy948 1481 GKLTAIAVDWIAHNIYWTVSDRSGSKPKGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWAETGASPRIESAWM 1560 (1576)
Q Consensus 1481 ~~p~glAVDwv~~nLYWTD~~~~~~~~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~m 1560 (1576)
..+.++++|. .++||.... .+.|.+.+.+|+....+- .....+.++++++ .|.||..... ..|.+.+.
T Consensus 215 ~~~~~~~~~~-~g~l~v~t~-------~~gl~~~~~~g~~~~~~~-~~~~~~~~~~~~~-~g~l~v~t~~--ggl~~~d~ 282 (330)
T 3hxj_A 215 WTVTRPAISE-DGTIYVTSL-------DGHLYAINPDGTEKWRFK-TGKRIESSPVIGN-TDTIYFGSYD--GHLYAINP 282 (330)
T ss_dssp CCCSCCEECT-TSCEEEEET-------TTEEEEECTTSCEEEEEE-CSSCCCSCCEECT-TSCEEEECTT--CEEEEECT
T ss_pred cceeceEECC-CCeEEEEcC-------CCeEEEECCCCCEeEEee-CCCCccccceEcC-CCeEEEecCC--CCEEEECC
Confidence 3567888884 457777654 245776666665433222 2222334566653 5666655432 13555554
Q ss_pred CCC
Q psy948 1561 DGS 1563 (1576)
Q Consensus 1561 DGs 1563 (1576)
+|.
T Consensus 283 ~g~ 285 (330)
T 3hxj_A 283 DGT 285 (330)
T ss_dssp TSC
T ss_pred CCc
Confidence 444
No 356
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=33.73 E-value=75 Score=39.83 Aligned_cols=72 Identities=17% Similarity=0.307 Sum_probs=46.7
Q ss_pred eccCCcceeeecCCCCeEEEeecCCCCC---------------CCCCeEEEEEcCCCc-------eEEEee---------
Q psy948 1478 KSIGKLTAIAVDWIAHNIYWTVSDRSGS---------------KPKGKVMVAHNDGRY-------RRSLVS--------- 1526 (1576)
Q Consensus 1478 ~~~~~p~glAVDwv~~nLYWTD~~~~~~---------------~~~~~I~v~~ldG~~-------~~~lv~--------- 1526 (1576)
+.+..|++|++++.++.||++-+..... -..+.|.+..+++.. ...++.
T Consensus 381 T~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~ 460 (592)
T 3zwu_A 381 TRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAG 460 (592)
T ss_dssp CCEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTT
T ss_pred EEEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCcccccc
Confidence 3577999999999999999995532100 013667777654321 112221
Q ss_pred ------------CCCCCceEEEEecCCCeEEEEecC
Q psy948 1527 ------------ENLESPSSIALDPTLGKMFWAETG 1550 (1576)
Q Consensus 1527 ------------~~l~~P~~IavDp~~G~LYWTD~g 1550 (1576)
..+..|-.|++||. |.||..+-+
T Consensus 461 ~~~~~~~~~~~~~~f~~PDNL~fd~~-G~LwI~eDg 495 (592)
T 3zwu_A 461 TPKGGSSNITPQNMFNSPDGLGFDKA-GRLWILTDG 495 (592)
T ss_dssp SGGGCCTTCCTTTCCCCEEEEEECTT-CCEEEEECC
T ss_pred cccccccccCCCCCccCCcceEECCC-CCEEEEecC
Confidence 13678999999984 778877654
No 357
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=33.12 E-value=8.4e+02 Score=30.75 Aligned_cols=99 Identities=15% Similarity=0.035 Sum_probs=52.8
Q ss_pred ccceeeeccc--CCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCC
Q psy948 1430 RRIEALDIDP--VDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKP 1507 (1576)
Q Consensus 1430 ~~i~ald~D~--~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~ 1507 (1576)
..+..++|.+ ....|+ +-...+.|...++......... ......+..+++.+....|+-...
T Consensus 185 ~~v~~~~~~~~~~~~~l~-~~~~dg~i~~~d~~~~~~~~~~--------~~~~~~v~~~~~~~~~~~l~~~~~------- 248 (814)
T 3mkq_A 185 RGVNYVDYYPLPDKPYMI-TASDDLTIKIWDYQTKSCVATL--------EGHMSNVSFAVFHPTLPIIISGSE------- 248 (814)
T ss_dssp TCCCEEEECCSTTCCEEE-EECTTSEEEEEETTTTEEEEEE--------ECCSSCEEEEEECSSSSEEEEEET-------
T ss_pred CCEEEEEEEECCCCCEEE-EEeCCCEEEEEECCCCcEEEEE--------cCCCCCEEEEEEcCCCCEEEEEeC-------
Confidence 4566677766 343333 3334555554443321111000 012345667888776665554433
Q ss_pred CCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeE
Q psy948 1508 KGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKM 1544 (1576)
Q Consensus 1508 ~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~L 1544 (1576)
.++|.+-++........+......+.+|++.|....+
T Consensus 249 dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 285 (814)
T 3mkq_A 249 DGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKN 285 (814)
T ss_dssp TSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGG
T ss_pred CCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCce
Confidence 3678888887654444444455667788887776544
No 358
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=32.28 E-value=1.9e+02 Score=33.62 Aligned_cols=110 Identities=12% Similarity=0.077 Sum_probs=55.4
Q ss_pred cccceeeecccCC-cEEEEeecccc----eeEEEeecccccceeeecccceee-ee------ccCCcceeeecCC--CCe
Q psy948 1429 ERRIEALDIDPVD-EIIYWVDSYDR----NIRRSFMLEAQKGQVQAGFGQDLG-IK------SIGKLTAIAVDWI--AHN 1494 (1576)
Q Consensus 1429 ~~~i~ald~D~~~-~~vYWsD~~~~----~I~r~~l~~~~~~~v~~~~~~~~~-~~------~~~~p~glAVDwv--~~n 1494 (1576)
...+.+|.+|+.+ ++||.. ...+ .|+|..-.+..=..+.... .+. .. .+..+.+|++|.. .+.
T Consensus 54 ~~~v~~i~~dp~~~~~l~~g-~~~g~~g~gl~~s~D~G~tW~~~~~~~--~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~ 130 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLMA-ARTGHLGPTVFRSDDGGGNWTEATRPP--AFNKAPEGETGRVVDHVFWLTPGHASEPGT 130 (394)
T ss_dssp TSEEEEEEECSSSTTCEEEE-EEC--CCEEEEEESSTTSCCEECSBCC--CCCCCC----CCCCCEEEEEEECCTTSTTC
T ss_pred CCceEEEEECCCCCCeEEEE-ecCCCCCccEEEeCCCCCCceECCccc--cCCCcccccccccccceeEEEeCCCCCCCE
Confidence 3467889999854 455544 3333 6776543222111111000 000 00 1124557899975 466
Q ss_pred EEEeecCCCCCCCCCeEEEEEcCCCceEEEeeC----------------CC--CCceEEEEecC-CCeEEEEe
Q psy948 1495 IYWTVSDRSGSKPKGKVMVAHNDGRYRRSLVSE----------------NL--ESPSSIALDPT-LGKMFWAE 1548 (1576)
Q Consensus 1495 LYWTD~~~~~~~~~~~I~v~~ldG~~~~~lv~~----------------~l--~~P~~IavDp~-~G~LYWTD 1548 (1576)
||..-. .+.|.++.-.|+..+.+... .. ....+|++||. .+.||...
T Consensus 131 l~~g~~-------~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~ 196 (394)
T 3b7f_A 131 WYAGTS-------PQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGM 196 (394)
T ss_dssp EEEEEE-------TTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEE
T ss_pred EEEEec-------CCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEE
Confidence 766432 25688776666655544210 01 12358999985 45666653
No 359
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=31.54 E-value=16 Score=45.75 Aligned_cols=31 Identities=29% Similarity=0.982 Sum_probs=24.5
Q ss_pred CccccccCCCcccc--ccee-CCCeeeeecC-CCcccC
Q psy948 1077 VDECAKVETNQCGH--KCVD-TLTGYYCECN-TGYNDD 1110 (1576)
Q Consensus 1077 idEC~~~~~~~Csq--~C~N-t~Gsy~C~C~-~Gy~l~ 1110 (1576)
||||.. ++|.+ .|++ ..++|.|.|+ +||.+.
T Consensus 1 vd~C~s---~PC~ngG~C~~~~~~~y~C~C~~~G~~G~ 35 (587)
T 3nt1_A 1 ANPCCS---NPCQNRGECMSTGFDQYKCDCTRTGFYGE 35 (587)
T ss_dssp CCTTTT---CCCCTTCEEEEEETTEEEEECTTSSEETT
T ss_pred CCCCCC---CCCCCCCEeeCCCCCCeEEecCCCCccCC
Confidence 577863 67876 8986 4589999999 999864
No 360
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=29.68 E-value=36 Score=31.34 Aligned_cols=61 Identities=21% Similarity=0.396 Sum_probs=43.6
Q ss_pred ecccccccCCCcceeeccCCceeccCCCccccCCC--CccCCCCccc--cccccCC-CceEEEcCCCcEe
Q psy948 1323 LHHCMNITGGSGYLCTCYQGFIIDKNNAKKCLDVD--ECATGIHHCS--QVCTNLN-GTYACSCNAGFTL 1387 (1576)
Q Consensus 1323 ~~~c~n~~g~~~~~C~C~~G~~~~~~~~~~c~d~n--eC~~~~~~Cs--~lC~n~~-gsy~C~Cp~G~~l 1387 (1576)
.+.|.....+ .-.|.|..+|... ...|.--+ .|..+||+|. ..|.... ..-.|.|...+.-
T Consensus 15 NA~Cyr~~dg-~EecRCllnykk~---~~kCV~~~~~~C~~NNGGCd~nA~C~~~~~~kIvC~C~~~~~~ 80 (95)
T 1b9w_A 15 NAACYRYLDG-TEEWRCLLYFKED---AGKCVPAPNMTCKDKNGGCAPEAECKMNDKNEIVCKCTKEGSE 80 (95)
T ss_dssp TEEEEECTTS-CEEEEECTTEEEE---TTEEEECTTCCTTTGGGGSCTTSEEEECTTSCEEEECCSTTEE
T ss_pred CcCeEEEcCC-CEEEEEECCeEec---CCEEEcCCCCCccccCCCcCCCcceeecCCCcEEEECCCCCCC
Confidence 3445554322 2689999999874 35575443 8999999994 6898776 6788999988764
No 361
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=29.16 E-value=1.6e+02 Score=33.39 Aligned_cols=108 Identities=10% Similarity=0.009 Sum_probs=53.4
Q ss_pred cccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCCC
Q psy948 1429 ERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPK 1508 (1576)
Q Consensus 1429 ~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~ 1508 (1576)
...+.+++|.+....|+... ..+.|...++.......+. ..+.......+..|++.+....|+-... .
T Consensus 100 ~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~----~~~~~~h~~~v~~~~~~~~~~~l~~~~~-------d 167 (377)
T 3dwl_C 100 NRAATFVRWSPNEDKFAVGS-GARVISVCYFEQENDWWVS----KHLKRPLRSTILSLDWHPNNVLLAAGCA-------D 167 (377)
T ss_dssp SSCEEEEECCTTSSCCEEEE-SSSCEEECCC-----CCCC----EEECSSCCSCEEEEEECTTSSEEEEEES-------S
T ss_pred CCceEEEEECCCCCEEEEEe-cCCeEEEEEECCcccceee----eEeecccCCCeEEEEEcCCCCEEEEEeC-------C
Confidence 44677888887666555433 3455543333322210000 0010002345678888775555555443 3
Q ss_pred CeEEEEEcCCCc---------------eEEEee--CCCCCceEEEEecCCCeEEEEe
Q psy948 1509 GKVMVAHNDGRY---------------RRSLVS--ENLESPSSIALDPTLGKMFWAE 1548 (1576)
Q Consensus 1509 ~~I~v~~ldG~~---------------~~~lv~--~~l~~P~~IavDp~~G~LYWTD 1548 (1576)
++|.+-++.... ...++. .......+|++.|...+|+...
T Consensus 168 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~ 224 (377)
T 3dwl_C 168 RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAG 224 (377)
T ss_dssp SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEE
T ss_pred CEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEe
Confidence 568887764111 112221 2334467899998766666554
No 362
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=29.14 E-value=4.1e+02 Score=34.44 Aligned_cols=122 Identities=13% Similarity=0.120 Sum_probs=59.5
Q ss_pred ccceeeecccCC-cEEEEeecc-c----ceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCC
Q psy948 1430 RRIEALDIDPVD-EIIYWVDSY-D----RNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRS 1503 (1576)
Q Consensus 1430 ~~i~ald~D~~~-~~vYWsD~~-~----~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~ 1503 (1576)
..+.+|++|+.. ++||.+-.. . ..|+|..-.|..=..+.......-...+...+..|||++...++.|.-..
T Consensus 64 ~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~-- 141 (789)
T 1sqj_A 64 MGTESIALDPNNPDRLYLAQGRYVGDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTR-- 141 (789)
T ss_dssp CSEEEEEEETTEEEEEEEEECSCTTSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECS--
T ss_pred CceeEEEECCCCCCEEEEEeCccCCCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEec--
Confidence 357888899865 456654321 2 56776533221111111100000000011134679999876555555331
Q ss_pred CCCCCCeEEEEEcCCCceEEEee-C----CCCCceEEEEecCCC-eEEEEecCCCCcEEEe
Q psy948 1504 GSKPKGKVMVAHNDGRYRRSLVS-E----NLESPSSIALDPTLG-KMFWAETGASPRIESA 1558 (1576)
Q Consensus 1504 ~~~~~~~I~v~~ldG~~~~~lv~-~----~l~~P~~IavDp~~G-~LYWTD~g~~~~Iera 1558 (1576)
...|.++.=.|+..+.+.. . .-.....|+++|..+ .||..-... ..|.|+
T Consensus 142 ----~~gl~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~-~~v~~S 197 (789)
T 1sqj_A 142 ----TEGIWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATAP-QGMYVT 197 (789)
T ss_dssp ----SSCEEEESSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEESST-TCEEEE
T ss_pred ----cCCEEEECCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEcCC-CeEEEE
Confidence 2457776656666655532 1 012235788898764 555544321 345554
No 363
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=28.96 E-value=2.2e+02 Score=32.29 Aligned_cols=106 Identities=11% Similarity=-0.048 Sum_probs=54.1
Q ss_pred cccceeeecccCCcEEEEeecccceeEEEeecccc-cceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCC
Q psy948 1429 ERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQ-KGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKP 1507 (1576)
Q Consensus 1429 ~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~-~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~ 1507 (1576)
...+.+|+|.+....|+-.. ..+.|+--++.... ..... ........+..|++.+..+.|+-...
T Consensus 55 ~~~v~~~~~s~~~~~l~s~s-~d~~v~vwd~~~~~~~~~~~------~~~~~~~~v~~~~~~~~~~~l~~~~~------- 120 (377)
T 3dwl_C 55 DKIVTCVDWAPKSNRIVTCS-QDRNAYVYEKRPDGTWKQTL------VLLRLNRAATFVRWSPNEDKFAVGSG------- 120 (377)
T ss_dssp SSCEEEEEECTTTCCEEEEE-TTSSEEEC------CCCCEE------ECCCCSSCEEEEECCTTSSCCEEEES-------
T ss_pred CceEEEEEEeCCCCEEEEEe-CCCeEEEEEcCCCCceeeee------EecccCCceEEEEECCCCCEEEEEec-------
Confidence 44678888888766555433 34555433333222 00010 01112345667788776666665544
Q ss_pred CCeEEEEEcCCCc----eEEEeeCCCCCceEEEEecCCCeEEEEe
Q psy948 1508 KGKVMVAHNDGRY----RRSLVSENLESPSSIALDPTLGKMFWAE 1548 (1576)
Q Consensus 1508 ~~~I~v~~ldG~~----~~~lv~~~l~~P~~IavDp~~G~LYWTD 1548 (1576)
.++|.+-+++... .+.+.........+|++.|...+|+-..
T Consensus 121 d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 165 (377)
T 3dwl_C 121 ARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGC 165 (377)
T ss_dssp SSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEE
T ss_pred CCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEe
Confidence 3678887776653 2333322456678999998665555443
No 364
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=28.36 E-value=6.7e+02 Score=28.19 Aligned_cols=104 Identities=11% Similarity=0.022 Sum_probs=54.0
Q ss_pred cccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCCC
Q psy948 1429 ERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPK 1508 (1576)
Q Consensus 1429 ~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~ 1508 (1576)
...+.+|+|.+....|+ +-...++|.--++.......+.... .....+..+++.+..+.|+-... .
T Consensus 240 ~~~v~~v~~~p~~~~l~-s~s~D~~v~lwd~~~~~~~~~~~~~------~~~~~~~~~~~s~~g~~l~~g~~-------d 305 (354)
T 2pbi_B 240 ESDVNSVRYYPSGDAFA-SGSDDATCRLYDLRADREVAIYSKE------SIIFGASSVDFSLSGRLLFAGYN-------D 305 (354)
T ss_dssp SSCEEEEEECTTSSEEE-EEETTSCEEEEETTTTEEEEEECCT------TCCSCEEEEEECTTSSEEEEEET-------T
T ss_pred CCCeEEEEEeCCCCEEE-EEeCCCeEEEEECCCCcEEEEEcCC------CcccceeEEEEeCCCCEEEEEEC-------C
Confidence 34577888887665544 3334555554444321111110000 01123456777665555554433 3
Q ss_pred CeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEE
Q psy948 1509 GKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFW 1546 (1576)
Q Consensus 1509 ~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYW 1546 (1576)
++|.+-++........+........+|++.|...+|.-
T Consensus 306 ~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~s 343 (354)
T 2pbi_B 306 YTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCS 343 (354)
T ss_dssp SCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEE
T ss_pred CcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEE
Confidence 67888887443333334445556678888886554443
No 365
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=28.17 E-value=6.2e+02 Score=27.62 Aligned_cols=106 Identities=11% Similarity=0.088 Sum_probs=55.6
Q ss_pred cccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCC-CeEEEeecCCCCCCC
Q psy948 1429 ERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIA-HNIYWTVSDRSGSKP 1507 (1576)
Q Consensus 1429 ~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~-~nLYWTD~~~~~~~~ 1507 (1576)
...+.+++|.+..+.++.+-...++|.--++.......... ......+..+++.+.. +.+..+-+.
T Consensus 140 ~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~~~l~s~s~------ 206 (304)
T 2ynn_A 140 EHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLT-------TGQERGVNYVDYYPLPDKPYMITASD------ 206 (304)
T ss_dssp CSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEE-------CCCTTCEEEEEECCSTTCCEEEEEET------
T ss_pred CCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceec-------cCCcCcEEEEEEEEcCCCCEEEEEcC------
Confidence 34577888888665555565566666554443222111110 0011123344444332 233334332
Q ss_pred CCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEE
Q psy948 1508 KGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWA 1547 (1576)
Q Consensus 1508 ~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWT 1547 (1576)
.++|.+-++........+........++++.|...+|.-.
T Consensus 207 D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~ 246 (304)
T 2ynn_A 207 DLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISG 246 (304)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEE
T ss_pred CCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEE
Confidence 4788888886654444444555666788888876555433
No 366
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=25.60 E-value=5.2e+02 Score=28.05 Aligned_cols=25 Identities=16% Similarity=0.183 Sum_probs=18.8
Q ss_pred ceeeecccCCcEEEEeecccceeEEEee
Q psy948 1432 IEALDIDPVDEIIYWVDSYDRNIRRSFM 1459 (1576)
Q Consensus 1432 i~ald~D~~~~~vYWsD~~~~~I~r~~l 1459 (1576)
..+|-|| .++.||-+ ..+.|+|..-
T Consensus 90 F~a~~fD-~~G~LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 90 FQFLFFD-PNGYLYAV--SKDKLYKASP 114 (236)
T ss_dssp CSEEEEC-TTSCEEEE--ETTEEEEESC
T ss_pred ceEEEEC-CCCCEEEe--CCCEEEEeCC
Confidence 3788888 46678887 4489998864
No 367
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=25.47 E-value=6.7e+02 Score=27.17 Aligned_cols=76 Identities=9% Similarity=0.094 Sum_probs=45.3
Q ss_pred CcceeeecCCC--CeEEEeecCCCCCCCCCeEEEEEcCCC---ceEEEee-CC-CCCceEEEEecCCCeEEEEecCCCCc
Q psy948 1482 KLTAIAVDWIA--HNIYWTVSDRSGSKPKGKVMVAHNDGR---YRRSLVS-EN-LESPSSIALDPTLGKMFWAETGASPR 1554 (1576)
Q Consensus 1482 ~p~glAVDwv~--~nLYWTD~~~~~~~~~~~I~v~~ldG~---~~~~lv~-~~-l~~P~~IavDp~~G~LYWTD~g~~~~ 1554 (1576)
.+.+||+.+.. +++.-+-+. .++|.+-+++.. ....++. .. .....+|+..|...+|.-.-....-+
T Consensus 206 ~V~~v~~sp~~~~~~~las~s~------D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~ 279 (297)
T 2pm7_B 206 WVRDVAWSPTVLLRSYMASVSQ------DRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVT 279 (297)
T ss_dssp CEEEEEECCCCSSSEEEEEEET------TSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEE
T ss_pred ceEEEEECCCCCCceEEEEEEC------CCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEE
Confidence 46677777654 355555432 467888877643 2333442 22 23446889998766666554444457
Q ss_pred EEEeecCCC
Q psy948 1555 IESAWMDGS 1563 (1576)
Q Consensus 1555 Iera~mDGs 1563 (1576)
|+...++|.
T Consensus 280 lw~~~~~g~ 288 (297)
T 2pm7_B 280 LWKENLEGK 288 (297)
T ss_dssp EEEECTTSC
T ss_pred EEEECCCCc
Confidence 888877775
No 368
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=24.93 E-value=7e+02 Score=27.16 Aligned_cols=57 Identities=16% Similarity=0.037 Sum_probs=33.3
Q ss_pred CcceeeecCCCCeEEEeecCCCCCCCCCeEEEEEcCCCceEEEeeCC-CCCceEEEEecCCCeEEEE
Q psy948 1482 KLTAIAVDWIAHNIYWTVSDRSGSKPKGKVMVAHNDGRYRRSLVSEN-LESPSSIALDPTLGKMFWA 1547 (1576)
Q Consensus 1482 ~p~glAVDwv~~nLYWTD~~~~~~~~~~~I~v~~ldG~~~~~lv~~~-l~~P~~IavDp~~G~LYWT 1547 (1576)
.+..|++.+..+.|+-... .++|.+-++........+... .....+|+ |...+|+.+
T Consensus 253 ~i~~~~~s~~~~~l~~~~~-------dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~ 310 (342)
T 1yfq_A 253 PVNSIEFSPRHKFLYTAGS-------DGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLA 310 (342)
T ss_dssp CEEEEEECTTTCCEEEEET-------TSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEE
T ss_pred eEEEEEEcCCCCEEEEecC-------CceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEE
Confidence 5678888876666665543 367999988754333333332 33445666 544444433
No 369
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=24.70 E-value=8.5e+02 Score=28.10 Aligned_cols=78 Identities=9% Similarity=0.077 Sum_probs=41.8
Q ss_pred cccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCCC
Q psy948 1429 ERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPK 1508 (1576)
Q Consensus 1429 ~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~ 1508 (1576)
...|.+|+|.+....++.+-...+.|.--++.......... ........+.+|++.+....|+-... .
T Consensus 250 ~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~-----~~~~h~~~v~~~~~spdg~~l~s~~~-------D 317 (435)
T 4e54_B 250 KKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFL-----YSLPHRHPVNAACFSPDGARLLTTDQ-------K 317 (435)
T ss_dssp SSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCS-----BCCBCSSCEEECCBCTTSSEEEEEES-------S
T ss_pred cceEEeeeecCCCceEEEEecCcceeeEEecccccccceEE-----EeeeccccccceeECCCCCeeEEEcC-------C
Confidence 44577888888877677665556666544443322111100 00011234567777765555554433 3
Q ss_pred CeEEEEEcCC
Q psy948 1509 GKVMVAHNDG 1518 (1576)
Q Consensus 1509 ~~I~v~~ldG 1518 (1576)
++|.+-++..
T Consensus 318 ~~i~iwd~~~ 327 (435)
T 4e54_B 318 SEIRVYSASQ 327 (435)
T ss_dssp SCEEEEESSS
T ss_pred CEEEEEECCC
Confidence 6677777643
No 370
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=24.44 E-value=6.9e+02 Score=26.95 Aligned_cols=98 Identities=11% Similarity=-0.023 Sum_probs=48.1
Q ss_pred CCeEEEEeccCCceE-ec---c--cccCCcceEEEeCCcceEEEecCCCcCeEEEEecCCCCcEEEEeccCCCCCcceEE
Q psy948 1174 SIKLDVAELDGTNRK-TL---K--TAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALT 1247 (1576)
Q Consensus 1174 ~~~I~v~~ldG~~r~-~l---~--~~l~~P~~iavdP~~g~lywtd~g~~~~I~ra~mdGs~~~~iv~~~~~l~~P~gLa 1247 (1576)
.+.|.+.++...... .+ . ..-.....+++.|...+|+-... ...|..-.+.......+............++
T Consensus 71 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~ 148 (337)
T 1gxr_A 71 KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGE--ASTLSIWDLAAPTPRIKAELTSSAPACYALA 148 (337)
T ss_dssp BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEES--SSEEEEEECCCC--EEEEEEECSSSCEEEEE
T ss_pred CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcC--CCcEEEEECCCCCcceeeecccCCCceEEEE
Confidence 566666666543211 11 1 22244567888887666665432 2345544554443222222223344456677
Q ss_pred EeccCCeEEEEcCCCCeEEEEeCCCCc
Q psy948 1248 LDYFTERLYWADAHLDYIASVDLDGKH 1274 (1576)
Q Consensus 1248 iD~~~~rlYw~D~~~~~I~s~~~dG~~ 1274 (1576)
+......|+.+. ....|...++....
T Consensus 149 ~~~~~~~l~~~~-~dg~v~~~d~~~~~ 174 (337)
T 1gxr_A 149 ISPDSKVCFSCC-SDGNIAVWDLHNQT 174 (337)
T ss_dssp ECTTSSEEEEEE-TTSCEEEEETTTTE
T ss_pred ECCCCCEEEEEe-CCCcEEEEeCCCCc
Confidence 766555555443 33445556665443
No 371
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=24.40 E-value=8.1e+02 Score=27.71 Aligned_cols=125 Identities=15% Similarity=0.030 Sum_probs=64.4
Q ss_pred cccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCCC
Q psy948 1429 ERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPK 1508 (1576)
Q Consensus 1429 ~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~ 1508 (1576)
...+.+|+|.+....| .+-...++|.--++.......+..... .........+..+|+.+.++.|+-... .
T Consensus 249 ~~~v~~v~~~p~~~~l-~s~s~D~~i~lwd~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~g~~-------d 319 (380)
T 3iz6_a 249 EGDINSVKFFPDGQRF-GTGSDDGTCRLFDMRTGHQLQVYNREP-DRNDNELPIVTSVAFSISGRLLFAGYS-------N 319 (380)
T ss_dssp SSCCCEEEECTTSSEE-EEECSSSCEEEEETTTTEEEEEECCCC-SSSCCSSCSCSEEEECSSSSEEEEECT-------T
T ss_pred CCCeEEEEEecCCCeE-EEEcCCCeEEEEECCCCcEEEEecccc-cccccccCceEEEEECCCCCEEEEEEC-------C
Confidence 3457788888766544 344455666544443222111111000 000011224678888876666654433 4
Q ss_pred CeEEEEEcCCCce-EEEe---eCCCCCceEEEEecCCCeEEEEecCCCCcEEEeecCCCC
Q psy948 1509 GKVMVAHNDGRYR-RSLV---SENLESPSSIALDPTLGKMFWAETGASPRIESAWMDGSH 1564 (1576)
Q Consensus 1509 ~~I~v~~ldG~~~-~~lv---~~~l~~P~~IavDp~~G~LYWTD~g~~~~Iera~mDGs~ 1564 (1576)
+.|.+-++..... ..+. ........+|++.|...+|.-.-+ ...|....+.|..
T Consensus 320 g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~--D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 320 GDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSW--DKNLKIWAFSGHR 377 (380)
T ss_dssp SCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECT--TSCEEEEECCSSS
T ss_pred CCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeC--CCCEEEEecCCCc
Confidence 6788888754333 2231 223445679999987655543333 2356666666543
No 372
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=24.20 E-value=7.4e+02 Score=27.20 Aligned_cols=59 Identities=14% Similarity=0.052 Sum_probs=37.1
Q ss_pred CCcceeeecCCCCeEEEeecCCCCCCCCCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEE
Q psy948 1481 GKLTAIAVDWIAHNIYWTVSDRSGSKPKGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWA 1547 (1576)
Q Consensus 1481 ~~p~glAVDwv~~nLYWTD~~~~~~~~~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWT 1547 (1576)
..+..|++.+..+.|.-... .++|.+-++........+. .-....+|++.|...+|.-.
T Consensus 197 ~~v~~~~~sp~g~~l~s~~~-------dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~la~~ 255 (319)
T 3frx_A 197 SNINTLTASPDGTLIASAGK-------DGEIMLWNLAAKKAMYTLS-AQDEVFSLAFSPNRYWLAAA 255 (319)
T ss_dssp SCEEEEEECTTSSEEEEEET-------TCEEEEEETTTTEEEEEEE-CCSCEEEEEECSSSSEEEEE
T ss_pred CcEEEEEEcCCCCEEEEEeC-------CCeEEEEECCCCcEEEEec-CCCcEEEEEEcCCCCEEEEE
Confidence 35667888876655554433 4789999887654333332 33567889999876555543
No 373
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=24.18 E-value=7.9e+02 Score=27.53 Aligned_cols=102 Identities=13% Similarity=0.050 Sum_probs=52.6
Q ss_pred ccceeeecccCC-cEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCCC
Q psy948 1430 RRIEALDIDPVD-EIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPK 1508 (1576)
Q Consensus 1430 ~~i~ald~D~~~-~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~ 1508 (1576)
..+.++++.+.. +.++++-...++|+.-++.......... .....+.+|++.+....|+ +-+. .
T Consensus 197 ~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~--------~h~~~v~~v~~~p~~~~l~-s~s~------D 261 (354)
T 2pbi_B 197 ADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFE--------THESDVNSVRYYPSGDAFA-SGSD------D 261 (354)
T ss_dssp SCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEEC--------CCSSCEEEEEECTTSSEEE-EEET------T
T ss_pred CCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEec--------CCCCCeEEEEEeCCCCEEE-EEeC------C
Confidence 345566666542 3455555556666555543321111110 1123566788876555444 4332 4
Q ss_pred CeEEEEEcCCCceEEEeeC--CCCCceEEEEecCCCeEEE
Q psy948 1509 GKVMVAHNDGRYRRSLVSE--NLESPSSIALDPTLGKMFW 1546 (1576)
Q Consensus 1509 ~~I~v~~ldG~~~~~lv~~--~l~~P~~IavDp~~G~LYW 1546 (1576)
++|.+-++.......++.. ......+|++.|...+|+-
T Consensus 262 ~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~ 301 (354)
T 2pbi_B 262 ATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFA 301 (354)
T ss_dssp SCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEE
T ss_pred CeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEE
Confidence 6788888866543333321 1234567888876555543
No 374
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=24.00 E-value=7.2e+02 Score=26.98 Aligned_cols=106 Identities=8% Similarity=-0.018 Sum_probs=55.8
Q ss_pred cccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeee-ccCCcceeeecCCCCeEEEeecCCCCCCC
Q psy948 1429 ERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIK-SIGKLTAIAVDWIAHNIYWTVSDRSGSKP 1507 (1576)
Q Consensus 1429 ~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~-~~~~p~glAVDwv~~nLYWTD~~~~~~~~ 1507 (1576)
...|.+|+|.|..+.+..+-...++|.-=++.......... . ..+. -...+..|++...+..|+-...
T Consensus 38 ~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~---~-~~l~~h~~~V~~~~~s~dg~~l~s~~~------- 106 (340)
T 4aow_A 38 NGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIP---Q-RALRGHSHFVSDVVISSDGQFALSGSW------- 106 (340)
T ss_dssp SSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEE---E-EEECCCSSCEEEEEECTTSSEEEEEET-------
T ss_pred cCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCccccee---e-EEEeCCCCCEEEEEECCCCCEEEEEcc-------
Confidence 34578888888766565665556666443443322111000 0 0111 1245677888776666665543
Q ss_pred CCeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEE
Q psy948 1508 KGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMF 1545 (1576)
Q Consensus 1508 ~~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LY 1545 (1576)
.+.|.+..+..................+...|...+|+
T Consensus 107 d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 144 (340)
T 4aow_A 107 DGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIV 144 (340)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEE
T ss_pred cccceEEeecccceeeeecCCCCceeEEEEeecCccce
Confidence 35677777666555444444444455555555444443
No 375
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=23.43 E-value=8.8e+02 Score=27.81 Aligned_cols=100 Identities=7% Similarity=-0.020 Sum_probs=53.8
Q ss_pred cccceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCCC
Q psy948 1429 ERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPK 1508 (1576)
Q Consensus 1429 ~~~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~ 1508 (1576)
...+.+|+|.+....| .+-...++|.--++.+.. .+... ......+..|++.+..+.|+-... .
T Consensus 150 ~~~V~~v~~~~~~~~l-~sgs~D~~i~iwd~~~~~---~~~~~-----~~h~~~V~~v~~~p~~~~l~s~s~-------D 213 (410)
T 1vyh_C 150 TDSVQDISFDHSGKLL-ASCSADMTIKLWDFQGFE---CIRTM-----HGHDHNVSSVSIMPNGDHIVSASR-------D 213 (410)
T ss_dssp SSCEEEEEECTTSSEE-EEEETTSCCCEEETTSSC---EEECC-----CCCSSCEEEEEECSSSSEEEEEET-------T
T ss_pred CCcEEEEEEcCCCCEE-EEEeCCCeEEEEeCCCCc---eeEEE-----cCCCCCEEEEEEeCCCCEEEEEeC-------C
Confidence 3457788888766544 344445555444443211 11100 011235677888776665554433 4
Q ss_pred CeEEEEEcCCCceEEEeeCCCCCceEEEEecCCCeE
Q psy948 1509 GKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKM 1544 (1576)
Q Consensus 1509 ~~I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~L 1544 (1576)
++|.+-++........+.......+.+++.|...+|
T Consensus 214 ~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l 249 (410)
T 1vyh_C 214 KTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLI 249 (410)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEE
T ss_pred CeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEE
Confidence 788888886554433344444556777777654333
No 376
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=23.03 E-value=5.3e+02 Score=29.70 Aligned_cols=118 Identities=17% Similarity=0.087 Sum_probs=59.3
Q ss_pred cceeeecccC--CcEEEEeecccceeEEEeecccccceeeecc--cceee--------eeccCCcceeeecCCC-CeEEE
Q psy948 1431 RIEALDIDPV--DEIIYWVDSYDRNIRRSFMLEAQKGQVQAGF--GQDLG--------IKSIGKLTAIAVDWIA-HNIYW 1497 (1576)
Q Consensus 1431 ~i~ald~D~~--~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~--~~~~~--------~~~~~~p~glAVDwv~-~nLYW 1497 (1576)
.+.+|.+++. .+.||... ..+.|+|..-.|..=..+.... ..... .........|++|... +.||.
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~-~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~v 194 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGT-SPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYI 194 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEE-ETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEE
T ss_pred ceeEEEeCCCCCCCEEEEEe-cCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEE
Confidence 5667888874 46666543 3466777643332211111000 00000 0001234589999754 56777
Q ss_pred eecCCCCCCCCCeEEEEEcCCCceEEEeeC--C--C--------CCceEEEEecCC-CeEEEEecCCCCcEEEee
Q psy948 1498 TVSDRSGSKPKGKVMVAHNDGRYRRSLVSE--N--L--------ESPSSIALDPTL-GKMFWAETGASPRIESAW 1559 (1576)
Q Consensus 1498 TD~~~~~~~~~~~I~v~~ldG~~~~~lv~~--~--l--------~~P~~IavDp~~-G~LYWTD~g~~~~Iera~ 1559 (1576)
... .+.|.++.-.|+..+.+... . + ....+|+++|.. +.||-... ..|.|..
T Consensus 195 g~~-------~ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~---~gl~~s~ 259 (394)
T 3b7f_A 195 GMS-------SGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNH---CGIYRMD 259 (394)
T ss_dssp EEE-------TBEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEET---TEEEEEE
T ss_pred EEC-------CCCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcC---CeEEEeC
Confidence 643 24577776666655544321 0 1 235789999975 55554432 2355554
No 377
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=22.50 E-value=34 Score=42.58 Aligned_cols=30 Identities=23% Similarity=0.755 Sum_probs=23.3
Q ss_pred CCccCCCCccc--ccccc-CCCceEEEcC-CCcEec
Q psy948 1357 DECATGIHHCS--QVCTN-LNGTYACSCN-AGFTLS 1388 (1576)
Q Consensus 1357 neC~~~~~~Cs--~lC~n-~~gsy~C~Cp-~G~~l~ 1388 (1576)
|+|.. .+|. ..|++ ..++|+|.|+ .||++.
T Consensus 3 d~C~~--~PC~ngG~C~~~~~~~y~C~C~~~G~~G~ 36 (553)
T 1q4g_A 3 NPCCY--YPCQHQGICVRFGLDRYQCDCTRTGYSGP 36 (553)
T ss_dssp CGGGG--CCCCTTCEEEEETTTEEEEECTTSSEETT
T ss_pred CcCCC--CCCCCCCCcCCCCCCceEeeCCCCCcCCC
Confidence 56653 3564 47888 8899999999 999974
No 378
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=22.39 E-value=33 Score=34.69 Aligned_cols=25 Identities=32% Similarity=1.030 Sum_probs=21.3
Q ss_pred Ccccc--cceeCCCeeeeecCCCcccC
Q psy948 1086 NQCGH--KCVDTLTGYYCECNTGYNDD 1110 (1576)
Q Consensus 1086 ~~Csq--~C~Nt~Gsy~C~C~~Gy~l~ 1110 (1576)
.+|.. .|.+..++|.|.|.+||.+.
T Consensus 125 ~pc~~~g~C~~~~~~~~c~C~~g~~g~ 151 (157)
T 1g1t_A 125 TSCSGHGECVETINNYTCKCDPGFSGL 151 (157)
T ss_dssp TGGGGSEEEEEETTEEEEEECTTEEST
T ss_pred CCCCCCCEeecCCCCeeEECCCCccCc
Confidence 45654 89999999999999999864
No 379
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=22.34 E-value=7.8e+02 Score=26.76 Aligned_cols=101 Identities=14% Similarity=-0.022 Sum_probs=53.9
Q ss_pred cceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCCCCe
Q psy948 1431 RIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPKGK 1510 (1576)
Q Consensus 1431 ~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~~~ 1510 (1576)
.+.++.|.+..+.|+-. ...++|.--++.......... ...+.+..|++.+....|+=... .++
T Consensus 57 ~v~~~~~~~~~~~l~s~-s~d~~i~vwd~~~~~~~~~~~--------~h~~~v~~~~~~~~~~~l~sgs~-------D~~ 120 (304)
T 2ynn_A 57 PVRAGKFIARKNWIIVG-SDDFRIRVFNYNTGEKVVDFE--------AHPDYIRSIAVHPTKPYVLSGSD-------DLT 120 (304)
T ss_dssp CEEEEEEEGGGTEEEEE-ETTSEEEEEETTTCCEEEEEE--------CCSSCEEEEEECSSSSEEEEEET-------TSC
T ss_pred cEEEEEEeCCCCEEEEE-CCCCEEEEEECCCCcEEEEEe--------CCCCcEEEEEEcCCCCEEEEECC-------CCe
Confidence 45666776666555433 334555443333211111000 11235678888876665553332 367
Q ss_pred EEEEEcCCCc-eEEEeeCCCCCceEEEEecCCCeEEEE
Q psy948 1511 VMVAHNDGRY-RRSLVSENLESPSSIALDPTLGKMFWA 1547 (1576)
Q Consensus 1511 I~v~~ldG~~-~~~lv~~~l~~P~~IavDp~~G~LYWT 1547 (1576)
|.+-++.... ....+........+|++.|..+.++.+
T Consensus 121 v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s 158 (304)
T 2ynn_A 121 VKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFAS 158 (304)
T ss_dssp EEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEE
T ss_pred EEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEE
Confidence 8888876542 233344444556789998876655544
No 380
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=21.96 E-value=36 Score=30.57 Aligned_cols=17 Identities=29% Similarity=0.778 Sum_probs=13.9
Q ss_pred eCCCeeeeecCCCcccC
Q psy948 1094 DTLTGYYCECNTGYNDD 1110 (1576)
Q Consensus 1094 Nt~Gsy~C~C~~Gy~l~ 1110 (1576)
+..+.|.|.|++||.+.
T Consensus 57 ~~~~~~~C~C~~GYtG~ 73 (79)
T 1xdt_R 57 KELRAPSCICHPGYHGE 73 (79)
T ss_dssp GGGTBCCEEECTTEEST
T ss_pred cCCCCeEEEcCCCcccc
Confidence 34478999999999875
No 381
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=21.62 E-value=52 Score=26.84 Aligned_cols=20 Identities=25% Similarity=0.773 Sum_probs=15.8
Q ss_pred cce--eCCCeeeeecCCCcccC
Q psy948 1091 KCV--DTLTGYYCECNTGYNDD 1110 (1576)
Q Consensus 1091 ~C~--Nt~Gsy~C~C~~Gy~l~ 1110 (1576)
.|. ...+.+.|.|++||.++
T Consensus 24 ~C~~i~~~~~~~C~C~~gy~G~ 45 (50)
T 2rnl_A 24 ECKYIEHLEAVTCKCQQEYFGE 45 (50)
T ss_dssp EEEEETTTTEEEEECCSSCCSS
T ss_pred EEEEecCCCCeeEECCCCcccc
Confidence 454 45678999999999875
No 382
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=21.50 E-value=32 Score=42.99 Aligned_cols=30 Identities=27% Similarity=0.755 Sum_probs=22.0
Q ss_pred CCccCCCCccc--ccccc-CCCceEEEcC-CCcEec
Q psy948 1357 DECATGIHHCS--QVCTN-LNGTYACSCN-AGFTLS 1388 (1576)
Q Consensus 1357 neC~~~~~~Cs--~lC~n-~~gsy~C~Cp-~G~~l~ 1388 (1576)
++|.. .+|. ..|++ ..++|+|.|+ .||++.
T Consensus 2 d~C~s--~PC~ngG~C~~~~~~~y~C~C~~~G~~G~ 35 (587)
T 3nt1_A 2 NPCCS--NPCQNRGECMSTGFDQYKCDCTRTGFYGE 35 (587)
T ss_dssp CTTTT--CCCCTTCEEEEEETTEEEEECTTSSEETT
T ss_pred CCCCC--CCCCCCCEeeCCCCCCeEEecCCCCccCC
Confidence 56664 3553 47885 4589999999 999874
No 383
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=21.23 E-value=42 Score=34.18 Aligned_cols=25 Identities=32% Similarity=0.978 Sum_probs=20.9
Q ss_pred Cccc--ccceeCCCeeeeecCCCcccC
Q psy948 1086 NQCG--HKCVDTLTGYYCECNTGYNDD 1110 (1576)
Q Consensus 1086 ~~Cs--q~C~Nt~Gsy~C~C~~Gy~l~ 1110 (1576)
..|+ ..|+++.++|.|.|.+||.+.
T Consensus 125 ~~C~~~g~C~~~~~~~~c~C~~g~~g~ 151 (164)
T 3cfw_A 125 WSCSGHGECVEIINNYTCNCDVGYYGP 151 (164)
T ss_dssp TSSCSSEEEEEETTEEEEEECTTCBSS
T ss_pred CcCCCCCeecccCCCceeeeCCCcccc
Confidence 4554 289999999999999999874
No 384
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=21.22 E-value=9.2e+02 Score=27.54 Aligned_cols=153 Identities=10% Similarity=0.048 Sum_probs=0.0
Q ss_pred ccCCceEEEEecCCceeeeccccccccccc--cccccceeeecccC---CcEEEEeecccceeEEEeecccccceeeecc
Q psy948 1397 ANDNKLTIVYSNGPEIRAYETHKRRFRDVI--SDERRIEALDIDPV---DEIIYWVDSYDRNIRRSFMLEAQKGQVQAGF 1471 (1576)
Q Consensus 1397 ~~~~~~~ll~s~~~~Ir~i~~~~~~~~~~v--~~~~~i~ald~D~~---~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~ 1471 (1576)
......++.-+....|+...+........+ .....+.+|.+.+. .+.++.+-...+.|+--++..........+.
T Consensus 223 s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 302 (437)
T 3gre_A 223 DEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINS 302 (437)
T ss_dssp CTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESS
T ss_pred CCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcC
Q ss_pred cceeeee------------------ccCCcceeeecCCCCeEEEeecCCCCCCCCCeEEEEEcCCCceEEEeeC------
Q psy948 1472 GQDLGIK------------------SIGKLTAIAVDWIAHNIYWTVSDRSGSKPKGKVMVAHNDGRYRRSLVSE------ 1527 (1576)
Q Consensus 1472 ~~~~~~~------------------~~~~p~glAVDwv~~nLYWTD~~~~~~~~~~~I~v~~ldG~~~~~lv~~------ 1527 (1576)
...+... ....+..|+++ .+++..+-+. .++|.+-++........+..
T Consensus 303 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~--~~~~l~s~~~------d~~i~~wd~~~~~~~~~~~~~~~~~~ 374 (437)
T 3gre_A 303 DEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS--NDKILLTDEA------TSSIVMFSLNELSSSKAVISPSRFSD 374 (437)
T ss_dssp SSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE--TTEEEEEEGG------GTEEEEEETTCGGGCEEEECC--CCC
T ss_pred CCCCccceecccccccccceecccccCCceEEEEEC--CceEEEecCC------CCeEEEEECCCcccceEEecccccCc
Q ss_pred -------------------------------CCCCceEEEEecC--CCeEEEEecCCCCcEEE
Q psy948 1528 -------------------------------NLESPSSIALDPT--LGKMFWAETGASPRIES 1557 (1576)
Q Consensus 1528 -------------------------------~l~~P~~IavDp~--~G~LYWTD~g~~~~Ier 1557 (1576)
..+...+|++.+. ..+|+-.+....-+|++
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 375 VFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp EEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred eEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
No 385
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=20.88 E-value=9.5e+02 Score=27.24 Aligned_cols=100 Identities=12% Similarity=-0.001 Sum_probs=55.6
Q ss_pred cceeeecccCCcEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCCCCeEEEeecCCCCCCCCCe
Q psy948 1431 RIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPKGK 1510 (1576)
Q Consensus 1431 ~i~ald~D~~~~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv~~nLYWTD~~~~~~~~~~~ 1510 (1576)
.+.+|+|.+....|+-. ...+.|.--++........+. .....+..|++.+....|+-... .++
T Consensus 125 ~v~~v~~s~dg~~l~s~-~~d~~i~iwd~~~~~~~~~~~--------~h~~~v~~~~~~p~~~~l~s~s~-------d~~ 188 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATG-AEDRLIRIWDIENRKIVMILQ--------GHEQDIYSLDYFPSGDKLVSGSG-------DRT 188 (393)
T ss_dssp BEEEEEECTTSSEEEEE-ETTSCEEEEETTTTEEEEEEC--------CCSSCEEEEEECTTSSEEEEEET-------TSE
T ss_pred eEEEEEECCCCCEEEEE-cCCCeEEEEECCCCcEEEEEc--------cCCCCEEEEEEcCCCCEEEEecC-------CCc
Confidence 36788888877666543 345566544443221111110 11234667888776666654433 478
Q ss_pred EEEEEcCCCceEEEeeCCCCCceEEEEecCCCeEEEE
Q psy948 1511 VMVAHNDGRYRRSLVSENLESPSSIALDPTLGKMFWA 1547 (1576)
Q Consensus 1511 I~v~~ldG~~~~~lv~~~l~~P~~IavDp~~G~LYWT 1547 (1576)
|.+-++........+ ..-.....+++.|..|.++.+
T Consensus 189 v~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~ 224 (393)
T 1erj_A 189 VRIWDLRTGQCSLTL-SIEDGVTTVAVSPGDGKYIAA 224 (393)
T ss_dssp EEEEETTTTEEEEEE-ECSSCEEEEEECSTTCCEEEE
T ss_pred EEEEECCCCeeEEEE-EcCCCcEEEEEECCCCCEEEE
Confidence 888888654333333 233456788888866665544
No 386
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=20.69 E-value=32 Score=28.91 Aligned_cols=16 Identities=38% Similarity=0.893 Sum_probs=13.5
Q ss_pred CCCeeeeecCCCcccC
Q psy948 1095 TLTGYYCECNTGYNDD 1110 (1576)
Q Consensus 1095 t~Gsy~C~C~~Gy~l~ 1110 (1576)
..++|.|.|++||.+.
T Consensus 29 ~~~~~~C~C~~Gf~G~ 44 (58)
T 3ltf_D 29 DLPVYSCECAIGFMGQ 44 (58)
T ss_dssp TEEEEEEEECTTEESS
T ss_pred CCCCEEeECCCCCccC
Confidence 4568999999999874
No 387
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=20.03 E-value=6.6e+02 Score=32.00 Aligned_cols=107 Identities=10% Similarity=0.028 Sum_probs=52.4
Q ss_pred cccceeeecccCC-cEEEEeecccceeEEEeecccccceeeecccceeeeeccCCcceeeecCC------------CCeE
Q psy948 1429 ERRIEALDIDPVD-EIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWI------------AHNI 1495 (1576)
Q Consensus 1429 ~~~i~ald~D~~~-~~vYWsD~~~~~I~r~~l~~~~~~~v~~~~~~~~~~~~~~~p~glAVDwv------------~~nL 1495 (1576)
...+..+.|.+.. +.++.+-...+.|+..++.......... .......+..|++.+. .+++
T Consensus 99 ~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~------~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~ 172 (753)
T 3jro_A 99 SASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPII------IDAHAIGVNSASWAPATIEEDGEHNGTKESRK 172 (753)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEE------EECCSSCEEEEEECCCC---------CGGGCC
T ss_pred CCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeE------eecCCCceEEEEecCcccccccccccCCCCCE
Confidence 3457778888772 3333444455666555554332111110 0111234566676663 1333
Q ss_pred EEeecCCCCCCCCCeEEEEEcCCCce-EEE---eeCCCCCceEEEEecCC--CeEEEE
Q psy948 1496 YWTVSDRSGSKPKGKVMVAHNDGRYR-RSL---VSENLESPSSIALDPTL--GKMFWA 1547 (1576)
Q Consensus 1496 YWTD~~~~~~~~~~~I~v~~ldG~~~-~~l---v~~~l~~P~~IavDp~~--G~LYWT 1547 (1576)
..+-+. .++|.+-++..... ..+ +...-....+|++.|.. |.++.+
T Consensus 173 l~sgs~------dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s 224 (753)
T 3jro_A 173 FVTGGA------DNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLAS 224 (753)
T ss_dssp EEEEET------TSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEE
T ss_pred EEEEEC------CCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEE
Confidence 334332 36688877654322 122 22334556789999884 444444
Done!