RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy948
(1576 letters)
>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}
Length = 263
Score = 113 bits (282), Expect = 4e-28
Identities = 49/157 (31%), Positives = 83/157 (52%), Gaps = 8/157 (5%)
Query: 1171 DVRSIKLDVAELDGTNRKTL-KTAIQDPRGITLHPGIGYVYFSSWNL-QAYIGKIGMDGS 1228
D + +++VA++DGT R+ L T + +PRGI P G +Y++ WN I MDG+
Sbjct: 97 DSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT 156
Query: 1229 NFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVF 1288
N R + +D++ PN LT D F+ +L W DA ++ + V+ G + + F
Sbjct: 157 N--RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG--LQYPF 212
Query: 1289 ALTLFEDHIYWTDWNTKSINRADKFNAREIQAGILHH 1325
A+T + ++Y+TDW T S+ D ++E+ H
Sbjct: 213 AVTSYGKNLYYTDWKTNSVIAMDLAISKEMD--TFHP 247
Score = 81.1 bits (199), Expect = 4e-17
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 21/169 (12%)
Query: 1404 IVYSNGPEIRAYETHKRRFRD------VISDERRIEALDIDPVDEIIYWVDSYDRNIRRS 1457
++++ +I + + + + I L D VD+++YW D + +I R+
Sbjct: 4 LLFAQTGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRA 63
Query: 1458 FMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPKGKVMVAHND 1517
+ + + +G IA+D + I+WT S ++ VA D
Sbjct: 64 SLHGGEPTTIIRQD--------LGSPEGIALDHLGRTIFWTDSQL------DRIEVAKMD 109
Query: 1518 GRYRRSLVSENLESPSSIALDPTLGKMFWAETGA-SPRIESAWMDGSHR 1565
G RR L L +P I DP G ++W + +P+IE++ MDG++R
Sbjct: 110 GTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR 158
Score = 52.6 bits (125), Expect = 1e-07
Identities = 29/246 (11%), Positives = 59/246 (23%), Gaps = 39/246 (15%)
Query: 1 MDFHYKENRFYFADVAAKTIYRSRVGSTEKERAYIGKIGMDGSNFTRILTHEDDIAWPNA 60
+ F + Y+ D++ +I R D+ P
Sbjct: 41 LAFDCVDKVVYWTDISEPSIGR-----------------ASLHGGEPTTIIRQDLGSPEG 83
Query: 61 LTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKGWLCDHDNDCGDGSDEGKECHD 120
+ LD+ ++W D+ LD I +DG + ++ D +
Sbjct: 84 IALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTD--------PVRGN 135
Query: 121 KYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNCRDGSDEGKECHDKYRTCSSEE 180
Y T + + + T D + S +
Sbjct: 136 LYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLN 195
Query: 181 FACQNFKCIRKT--------------YHCDGEDDCGDRSDEFNCSRDYRVLRNTTHRPYD 226
A + + + Y+ D + + D + R Y
Sbjct: 196 PAQPGRRKVLEGLQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYG 255
Query: 227 IHVYHP 232
I +
Sbjct: 256 ITIALS 261
Score = 51.8 bits (123), Expect = 2e-07
Identities = 34/255 (13%), Positives = 63/255 (24%), Gaps = 30/255 (11%)
Query: 1208 YVYFSSWNLQAYIGKIGMDGSNFTRILTHE---DDIAWPNALTLDYFTERLYWADAHLDY 1264
++ F+ I ++ ++ + + L D + +YW D
Sbjct: 3 HLLFAQ---TGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPS 59
Query: 1265 IASVDLDGKHKHIVISGQKV-PHVFALTLFEDHIYWTDWNTKSINRA--DKFNAREIQAG 1321
I L G +I P AL I+WTD I A D R +
Sbjct: 60 IGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDT 119
Query: 1322 ILHHCMNITGGSGYLCTCYQGFIIDKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACSC 1381
L + I + D N ++
Sbjct: 120 GLVNPRGIVTDPVRGNLYW----TDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFD 175
Query: 1382 NAGFTLSDGLSGVCKANDNKLTIVYSNGPEIRAYETHKRRFRDVISDERRIEALDIDPVD 1441
L A ++ + P R V+ + A+
Sbjct: 176 AFSSQLC-----WVDAGTHRAECLNPAQPGRRK----------VLEGLQYPFAVTSY--G 218
Query: 1442 EIIYWVDSYDRNIRR 1456
+ +Y+ D ++
Sbjct: 219 KNLYYTDWKTNSVIA 233
Score = 49.1 bits (116), Expect = 2e-06
Identities = 34/153 (22%), Positives = 55/153 (35%), Gaps = 13/153 (8%)
Query: 1413 RAYETHKRRFRDVISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFG 1472
RA + D E + +D + I+W DS I + ++
Sbjct: 62 RASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVA--------KMDGTQR 113
Query: 1473 QDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPKGKVMVAHNDGRYRRSLVSENLESP 1532
+ L + I D + N+YWT +R K+ +H DG RR L +NL P
Sbjct: 114 RVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDN----PKIETSHMDGTNRRILAQDNLGLP 169
Query: 1533 SSIALDPTLGKMFWAETGASPRIESAWMDGSHR 1565
+ + D ++ W + G R E R
Sbjct: 170 NGLTFDAFSSQLCWVDAGTH-RAECLNPAQPGR 201
Score = 45.3 bits (106), Expect = 3e-05
Identities = 21/124 (16%), Positives = 49/124 (39%), Gaps = 7/124 (5%)
Query: 1174 SIKLDVAELDGTNRKTLKTAIQD-PRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTR 1232
+ K++ + +DGTNR+ L P G+T + + + +
Sbjct: 145 NPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTH-RAECLNPAQPGRRK 203
Query: 1233 ILTHEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFALTL 1292
+L + + +P A+T + + LY+ D + + ++DL + K ++ +T+
Sbjct: 204 VL---EGLQYPFAVTS--YGKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITI 258
Query: 1293 FEDH 1296
Sbjct: 259 ALSQ 262
Score = 43.7 bits (102), Expect = 9e-05
Identities = 23/216 (10%), Positives = 50/216 (23%), Gaps = 22/216 (10%)
Query: 32 RAYIGKIGMDGSNFTRILTHE---DDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGK 88
I ++ ++ + + L D + +YW D I L G
Sbjct: 9 TGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGG 68
Query: 89 HKHIVISGQKGWLCD----------HDNDCGDGSDEGKECHDKYRTCSSEEFACQNFKCI 138
+I G D E + R + +
Sbjct: 69 EPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIV 128
Query: 139 ---RKTYHCDGEDDCGDRSDEFNCRDGSDEGKECHDKYRTCSSEEFACQNFKCIRKTYHC 195
+ + + + E + DG++ D + F + +
Sbjct: 129 TDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQL----CWV 184
Query: 196 DGEDDCGDRSDEFNCSRDYRVLRNTTHRPYDIHVYH 231
D + + R + P+ + Y
Sbjct: 185 DAGTHRAECLN--PAQPGRRKVLEGLQYPFAVTSYG 218
>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor
{Human (Homo sapiens) [TaxId: 9606]}
Length = 266
Score = 103 bits (257), Expect = 8e-25
Identities = 41/136 (30%), Positives = 76/136 (55%), Gaps = 3/136 (2%)
Query: 1185 TNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPN 1244
+ + PR I + P G++Y++ W A I K G++G + ++I WPN
Sbjct: 110 KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD--IYSLVTENIQWPN 167
Query: 1245 ALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQK-VPHVFALTLFEDHIYWTDWN 1303
+TLD + RLYW D+ L I+S+D++G ++ ++ +K + H F+L +FED ++WTD
Sbjct: 168 GITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDII 227
Query: 1304 TKSINRADKFNAREIQ 1319
++I A++ ++
Sbjct: 228 NEAIFSANRLTGSDVN 243
Score = 87.7 bits (216), Expect = 2e-19
Identities = 46/169 (27%), Positives = 72/169 (42%), Gaps = 10/169 (5%)
Query: 1404 IVYSNGPEIRAYETHKRRFRDVISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQ 1463
+ ++N E+R + + +I + R + ALD + IYW D R I + +
Sbjct: 4 LFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQL---- 59
Query: 1464 KGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTVSDRSGSKPKGKVMVAHNDGRYRRS 1523
+ + I +AVDWI NIYWT S G V VA G R++
Sbjct: 60 DRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVL------GTVSVADTKGVKRKT 113
Query: 1524 LVSENLESPSSIALDPTLGKMFWAETGASPRIESAWMDGSHRSATQISN 1572
L EN P +I +DP G M+W + G +I+ ++G + N
Sbjct: 114 LFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN 162
Score = 70.0 bits (170), Expect = 2e-13
Identities = 40/257 (15%), Positives = 91/257 (35%), Gaps = 30/257 (11%)
Query: 1206 IGYVYFSSWNLQAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDYFTERLYWADAHLDYI 1265
I Y++F++ + + K+ +D S +T ++ + ++ AL + + R+YW+D I
Sbjct: 1 IAYLFFTNRH---EVRKMTLDRSEYTSLIPNLRNVV---ALDTEVASNRIYWSDLSQRMI 54
Query: 1266 ASVDLDGKH-----KHIVISGQKVPHVFALTLFEDHIYWTDWNTKSINRADKFNAREIQA 1320
S LD H ++ + P A+ +IYWTD +++
Sbjct: 55 CSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVS-------VADTK 107
Query: 1321 GILHHCMNITGGSGYLCTCYQGFIIDKNNAKKCLDVDECATGIHHCSQVCTNLNGTYACS 1380
G+ + GS + ++D + I ++ +
Sbjct: 108 GVKRKTLFRENGS-----KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN 162
Query: 1381 CNAGFTLSDGLSGVCKANDNKLTIVYSNGPEIRAYETHKRRFRDVISDERRI-EALDIDP 1439
+ +L V S I + + + + ++ DE+R+ +
Sbjct: 163 IQWPNGI------TLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV 216
Query: 1440 VDEIIYWVDSYDRNIRR 1456
++ ++W D + I
Sbjct: 217 FEDKVFWTDIINEAIFS 233
Score = 68.0 bits (165), Expect = 1e-12
Identities = 39/249 (15%), Positives = 78/249 (31%), Gaps = 34/249 (13%)
Query: 1 MDFHYKENRFYFADVAAKTIYRSRVGSTEKERAYIGKIGMDGSNFTRILT--HEDDIAWP 58
+D NR Y++D++ + I ++ +D ++ DI P
Sbjct: 35 LDTEVASNRIYWSDLSQRMICSTQ---------------LDRAHGVSSYDTVISRDIQAP 79
Query: 59 NALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKGWLC----DHDNDCGDGSDE 114
+ L +D+ +YW D+ L ++ D G + + D + +D
Sbjct: 80 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDW 139
Query: 115 GKECHDKYRTCSSEEFACQNFKCIRKTYHCDGE--------DDCGDRSDEFNCRDGSDEG 166
G K + + + I+ + D S +G +
Sbjct: 140 GTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK 199
Query: 167 KECHDKYRTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNCSRDYRVLRNTTHRPYD 226
D+ R A K + D ++ ++ S D +L P D
Sbjct: 200 TILEDEKRLAHPFSLAVFE----DKVFWTDIINEAIFSANRLTGS-DVNLLAENLLSPED 254
Query: 227 IHVYHPLKQ 235
+ ++H L Q
Sbjct: 255 MVLFHNLTQ 263
Score = 63.0 bits (152), Expect = 5e-11
Identities = 37/278 (13%), Positives = 84/278 (30%), Gaps = 27/278 (9%)
Query: 1260 AHLDYIASVDLDGKHKHIVISGQKVPHVFALTLFEDHIYWTDWNTKSINRADKFNAREIQ 1319
+ + + LD +I + + + IYW+D + + I A +
Sbjct: 7 TNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS 66
Query: 1320 AGILHHCMNITGGSGYLCTCYQGFIIDKNNAKKCLDVDECATGIHHCSQVCTNLNGTYAC 1379
+ +I G L + I ++ G+ + N + A
Sbjct: 67 SYDTVISRDIQAPDG-LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRA- 124
Query: 1380 SCNAGFTLSDGLSGVCKANDNKLTIVYSNGPEIRAYETHKRRFRDVISDERRIEALDIDP 1439
+ + + + + + V + + + +D
Sbjct: 125 -----IVVDPVHGFMYWTDWGTPAKIK------KGGLNGVDIYSLVTENIQWPNGITLDL 173
Query: 1440 VDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLTAIAVDWIAHNIYWTV 1499
+ +YWVDS +I + + + + + ++AV ++WT
Sbjct: 174 LSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKR------LAHPFSLAVF--EDKVFWT- 224
Query: 1500 SDRSGSKPKGKVMVAHNDGRYRRSLVSENLESPSSIAL 1537
D + A+ +L++ENL SP + L
Sbjct: 225 -DII----NEAIFSANRLTGSDVNLLAENLLSPEDMVL 257
Score = 58.8 bits (141), Expect = 1e-09
Identities = 30/175 (17%), Positives = 60/175 (34%), Gaps = 8/175 (4%)
Query: 1182 LDGTNRKTLKTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGMDGSNFTRILT--HEDD 1239
LD + +L +++ + +Y+S + + I +D ++ D
Sbjct: 17 LDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRM-ICSTQLDRAHGVSSYDTVISRD 75
Query: 1240 IAWPNALTLDYFTERLYWADAHLDYIASVDLDG-KHKHIVISGQKVPHVFALTLFEDHIY 1298
I P+ L +D+ +YW D+ L ++ D G K K + P + +Y
Sbjct: 76 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMY 135
Query: 1299 WTDWNTKSINRADKFNAREIQAGILHHCMNITGGSGYLCTCYQGFIIDKNNAKKC 1353
WTDW T + + N +I + + ++K
Sbjct: 136 WTDWGTPAKIKKGGLNGVDIY----SLVTENIQWPNGITLDLLSGRLYWVDSKLH 186
Score = 46.1 bits (108), Expect = 1e-05
Identities = 34/142 (23%), Positives = 61/142 (42%), Gaps = 14/142 (9%)
Query: 1425 VISDERRIEALDIDPVDEIIYWVDSYDRNIRRSFMLEAQKGQVQAGFGQDLGIKSIGKLT 1484
+ D + + L +D + IYW DS + + + + L ++ K
Sbjct: 72 ISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT--------KGVKRKTLFRENGSKPR 123
Query: 1485 AIAVDWIAHNIYWTVSDRSGSKPKGKVMVAHNDGRYRRSLVSENLESPSSIALDPTLGKM 1544
AI VD + +YWT K+ +G SLV+EN++ P+ I LD G++
Sbjct: 124 AIVVDPVHGFMYWTDWGT-----PAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRL 178
Query: 1545 FWAETGASPRIESAWMDGSHRS 1566
+W ++ I S ++G +R
Sbjct: 179 YWVDSK-LHSISSIDVNGGNRK 199
Score = 33.0 bits (74), Expect = 0.21
Identities = 21/172 (12%), Positives = 53/172 (30%), Gaps = 18/172 (10%)
Query: 1075 CNVDECAKVETNQCGHKCVDTLTGYYCECNTGYNDDDIGTVSPSSNKVLTRSTVIYHV-- 1132
+ + G V G + N P + V +Y
Sbjct: 85 DWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGS-----KPRAIVVDPVHGFMYWTDW 139
Query: 1133 ----RIWSSNVLVMADVYSTRGSVMENRTVKMEVTKIPLCALDVRSIKLDVAELDGTNRK 1188
+I + + ++ + +++ L +D + + +++G NRK
Sbjct: 140 GTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK 199
Query: 1189 TL---KTAIQDPRGITLHPGIGYVYFSSWNLQAYIGKIGM-DGSNFTRILTH 1236
T+ + + P + + V+++ +A I GS+ + +
Sbjct: 200 TILEDEKRLAHPFSLAVFE--DKVFWTDIINEA-IFSANRLTGSDVNLLAEN 248
>d1d2la_ g.12.1.1 (A:) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 45
Score = 55.2 bits (133), Expect = 2e-10
Identities = 19/40 (47%), Positives = 23/40 (57%)
Query: 544 GAYRQCSESEFQCKNGKCIPAQWRCDHDEDCTDGSDEMEC 583
G+ QC EF C N +CI +W+CD D DC D SDE
Sbjct: 1 GSPPQCQPGEFACANSRCIQERWKCDGDNDCLDNSDEAPA 40
Score = 55.2 bits (133), Expect = 2e-10
Identities = 19/40 (47%), Positives = 23/40 (57%)
Query: 746 GAYRQCSESEFQCKNGKCIPAQWRCDHDEDCTDGSDEMEC 785
G+ QC EF C N +CI +W+CD D DC D SDE
Sbjct: 1 GSPPQCQPGEFACANSRCIQERWKCDGDNDCLDNSDEAPA 40
Score = 51.3 bits (123), Expect = 5e-09
Identities = 24/43 (55%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 375 CDLPCPDLEFKCASNGRCILNSWKCDGEPDCKDGSDEDPAMCH 417
C EF CA N RCI WKCDG+ DC D SDE PA+CH
Sbjct: 2 SPPQCQPGEFACA-NSRCIQERWKCDGDNDCLDNSDEAPALCH 43
Score = 49.8 bits (119), Expect = 1e-08
Identities = 16/39 (41%), Positives = 18/39 (46%)
Query: 337 PARQCRAGSFQCDNGNCTPSASICDGVDDCRDGSDEKHC 375
QC+ G F C N C CDG +DC D SDE
Sbjct: 2 SPPQCQPGEFACANSRCIQERWKCDGDNDCLDNSDEAPA 40
Score = 49.4 bits (118), Expect = 2e-08
Identities = 21/42 (50%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 419 RPCDKDTEFACRNGHCIPKLWVCDFDNDCGDDSDEPAYMCRQ 460
C EFAC N CI + W CD DNDC D+SDE +C Q
Sbjct: 4 PQCQPG-EFACANSRCIQERWKCDGDNDCLDNSDEAPALCHQ 44
Score = 48.6 bits (116), Expect = 4e-08
Identities = 21/42 (50%), Positives = 26/42 (61%)
Query: 502 CPKCHETTDFQCKNNRCIPKRWMCDFENDCGDQSDEAEDLCA 543
P + +F C N+RCI +RW CD +NDC D SDEA LC
Sbjct: 2 SPPQCQPGEFACANSRCIQERWKCDGDNDCLDNSDEAPALCH 43
Score = 48.6 bits (116), Expect = 4e-08
Identities = 21/42 (50%), Positives = 26/42 (61%)
Query: 704 CPKCHETTDFQCKNNRCIPKRWMCDFENDCGDQSDEAEDLCA 745
P + +F C N+RCI +RW CD +NDC D SDEA LC
Sbjct: 2 SPPQCQPGEFACANSRCIQERWKCDGDNDCLDNSDEAPALCH 43
Score = 47.5 bits (113), Expect = 1e-07
Identities = 17/38 (44%), Positives = 23/38 (60%)
Query: 174 RTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNCS 211
C EFAC N +CI++ + CDG++DC D SDE
Sbjct: 4 PQCQPGEFACANSRCIQERWKCDGDNDCLDNSDEAPAL 41
Score = 47.5 bits (113), Expect = 1e-07
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 123 RTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 159
C EFAC N +CI++ + CDG++DC D SDE
Sbjct: 4 PQCQPGEFACANSRCIQERWKCDGDNDCLDNSDEAPA 40
Score = 45.6 bits (108), Expect = 6e-07
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 587 QCKNGTFQCSSGHCIAAYFRCDGDRDCRDLSDEMNC 622
QC+ G F C++ CI ++CDGD DC D SDE
Sbjct: 5 QCQPGEFACANSRCIQERWKCDGDNDCLDNSDEAPA 40
Score = 44.0 bits (104), Expect = 2e-06
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 1039 TCSSSQFRCNNGKCIDYHLVCNKESDCEDDSDEP 1072
C +F C N +CI C+ ++DC D+SDE
Sbjct: 5 QCQPGEFACANSRCIQERWKCDGDNDCLDNSDEA 38
Score = 43.6 bits (103), Expect = 3e-06
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Query: 461 RNCTKGWERCPGKTNYRCIPKWLFCDGKDDCRDGSDELPQNCPK 504
C G C N RCI + CDG +DC D SDE P C +
Sbjct: 4 PQCQPGEFAC---ANSRCIQERWKCDGDNDCLDNSDEAPALCHQ 44
Score = 42.5 bits (100), Expect = 7e-06
Identities = 15/32 (46%), Positives = 19/32 (59%)
Query: 868 GTFQCSSGHCIAAYFRCDGDRDCRDLSDEMNC 899
G F C++ CI ++CDGD DC D SDE
Sbjct: 9 GEFACANSRCIQERWKCDGDNDCLDNSDEAPA 40
Score = 42.1 bits (99), Expect = 8e-06
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 955 HKYQCDNGRCIASYQLCDGVDNCGDGSDENNLTLCTVH 992
++ C N RCI CDG ++C D SDE C H
Sbjct: 9 GEFACANSRCIQERWKCDGDNDCLDNSDEAPAL-CHQH 45
Score = 41.3 bits (97), Expect = 2e-05
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 299 CTQGQHHCGGHDQKCIPWFWKCDGERDCGDGSDEP 333
C G+ C + +CI WKCDG+ DC D SDE
Sbjct: 6 CQPGEFACA--NSRCIQERWKCDGDNDCLDNSDEA 38
Score = 41.3 bits (97), Expect = 2e-05
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 632 CPEYKFQCASTHLCVEQSELCDGTDDCGDNSDETSSLC 669
C +F CA++ C+++ CDG +DC DNSDE +LC
Sbjct: 6 CQPGEFACANSR-CIQERWKCDGDNDCLDNSDEAPALC 42
Score = 41.3 bits (97), Expect = 2e-05
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 909 CPEYKFQCASTHLCVEQSELCDGTDDCGDNSDETSSLC 946
C +F CA++ C+++ CDG +DC DNSDE +LC
Sbjct: 6 CQPGEFACANSR-CIQERWKCDGDNDCLDNSDEAPALC 42
Score = 40.5 bits (95), Expect = 3e-05
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 679 KCIPKWLFCDGKDDCRDGSDELPQNCPK 706
+CI + CDG +DC D SDE P C +
Sbjct: 17 RCIQERWKCDGDNDCLDNSDEAPALCHQ 44
Score = 38.6 bits (90), Expect = 1e-04
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 834 QCKNGTFQCSSGHCIAAYFRCDGDRDCRDLS 864
QC+ G F C++ CI ++CDGD DC D S
Sbjct: 5 QCQPGEFACANSRCIQERWKCDGDNDCLDNS 35
Score = 36.7 bits (85), Expect = 6e-04
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 1002 SQYTCSNHKCIDRAALCNHVDDCGDLSDELGCH 1034
++ C+N +CI C+ +DC D SDE
Sbjct: 9 GEFACANSRCIQERWKCDGDNDCLDNSDEAPAL 41
Score = 29.4 bits (66), Expect = 0.32
Identities = 11/17 (64%), Positives = 12/17 (70%)
Query: 98 KGWLCDHDNDCGDGSDE 114
+ W CD DNDC D SDE
Sbjct: 21 ERWKCDGDNDCLDNSDE 37
>d2fcwb1 g.12.1.1 (B:86-124) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 54.3 bits (131), Expect = 4e-10
Identities = 21/37 (56%), Positives = 27/37 (72%)
Query: 547 RQCSESEFQCKNGKCIPAQWRCDHDEDCTDGSDEMEC 583
+ CS++EF+C +GKCI Q+ CD D DC DGSDE C
Sbjct: 1 KTCSQAEFRCHDGKCISRQFVCDSDRDCLDGSDEASC 37
Score = 54.3 bits (131), Expect = 4e-10
Identities = 21/37 (56%), Positives = 27/37 (72%)
Query: 749 RQCSESEFQCKNGKCIPAQWRCDHDEDCTDGSDEMEC 785
+ CS++EF+C +GKCI Q+ CD D DC DGSDE C
Sbjct: 1 KTCSQAEFRCHDGKCISRQFVCDSDRDCLDGSDEASC 37
Score = 51.2 bits (123), Expect = 4e-09
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 123 RTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 159
+TCS EF C + KCI + + CD + DC D SDE +C
Sbjct: 1 KTCSQAEFRCHDGKCISRQFVCDSDRDCLDGSDEASC 37
Score = 51.2 bits (123), Expect = 4e-09
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 174 RTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 210
+TCS EF C + KCI + + CD + DC D SDE +C
Sbjct: 1 KTCSQAEFRCHDGKCISRQFVCDSDRDCLDGSDEASC 37
Score = 50.1 bits (120), Expect = 1e-08
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 588 CKNGTFQCSSGHCIAAYFRCDGDRDCRDLSDEMNCP 623
C F+C G CI+ F CD DRDC D SDE +CP
Sbjct: 3 CSQAEFRCHDGKCISRQFVCDSDRDCLDGSDEASCP 38
Score = 49.7 bits (119), Expect = 1e-08
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 339 RQCRAGSFQCDNGNCTPSASICDGVDDCRDGSDEKHCDL 377
+ C F+C +G C +CD DC DGSDE C +
Sbjct: 1 KTCSQAEFRCHDGKCISRQFVCDSDRDCLDGSDEASCPV 39
Score = 47.4 bits (113), Expect = 1e-07
Identities = 18/33 (54%), Positives = 21/33 (63%)
Query: 868 GTFQCSSGHCIAAYFRCDGDRDCRDLSDEMNCP 900
F+C G CI+ F CD DRDC D SDE +CP
Sbjct: 6 AEFRCHDGKCISRQFVCDSDRDCLDGSDEASCP 38
Score = 45.1 bits (107), Expect = 6e-07
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 379 CPDLEFKCASNGRCILNSWKCDGEPDCKDGSDED 412
C EF+C +G+CI + CD + DC DGSDE
Sbjct: 3 CSQAEFRCH-DGKCISRQFVCDSDRDCLDGSDEA 35
Score = 44.7 bits (106), Expect = 9e-07
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 419 RPCDKDTEFACRNGHCIPKLWVCDFDNDCGDDSDE 453
+ C + EF C +G CI + +VCD D DC D SDE
Sbjct: 1 KTCSQA-EFRCHDGKCISRQFVCDSDRDCLDGSDE 34
Score = 44.7 bits (106), Expect = 9e-07
Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 1039 TCSSSQFRCNNGKCIDYHLVCNKESDCEDDSDEPLHCNV 1077
TCS ++FRC++GKCI VC+ + DC D SDE C V
Sbjct: 2 TCSQAEFRCHDGKCISRQFVCDSDRDCLDGSDE-ASCPV 39
Score = 42.8 bits (101), Expect = 4e-06
Identities = 13/28 (46%), Positives = 21/28 (75%)
Query: 511 FQCKNNRCIPKRWMCDFENDCGDQSDEA 538
F+C + +CI ++++CD + DC D SDEA
Sbjct: 8 FRCHDGKCISRQFVCDSDRDCLDGSDEA 35
Score = 42.8 bits (101), Expect = 4e-06
Identities = 13/28 (46%), Positives = 21/28 (75%)
Query: 713 FQCKNNRCIPKRWMCDFENDCGDQSDEA 740
F+C + +CI ++++CD + DC D SDEA
Sbjct: 8 FRCHDGKCISRQFVCDSDRDCLDGSDEA 35
Score = 42.4 bits (100), Expect = 6e-06
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 955 HKYQCDNGRCIASYQLCDGVDNCGDGSDENN 985
+++C +G+CI+ +CD +C DGSDE +
Sbjct: 6 AEFRCHDGKCISRQFVCDSDRDCLDGSDEAS 36
Score = 42.0 bits (99), Expect = 7e-06
Identities = 20/39 (51%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Query: 299 CTQGQHHCGGHDQKCIPWFWKCDGERDCGDGSDEPMSCP 337
C+Q + C D KCI + CD +RDC DGSDE SCP
Sbjct: 3 CSQAEFRCH--DGKCISRQFVCDSDRDCLDGSDE-ASCP 38
Score = 39.7 bits (93), Expect = 4e-05
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Query: 461 RNCTKGWERCPGKTNYRCIPKWLFCDGKDDCRDGSDELPQNCP 503
+ C++ RC + +CI + CD DC DGSDE +CP
Sbjct: 1 KTCSQAEFRC---HDGKCISRQFVCDSDRDCLDGSDE--ASCP 38
Score = 38.9 bits (91), Expect = 9e-05
Identities = 15/31 (48%), Positives = 18/31 (58%)
Query: 835 CKNGTFQCSSGHCIAAYFRCDGDRDCRDLSE 865
C F+C G CI+ F CD DRDC D S+
Sbjct: 3 CSQAEFRCHDGKCISRQFVCDSDRDCLDGSD 33
Score = 38.5 bits (90), Expect = 1e-04
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 630 RFCPEYKFQCASTHLCVEQSELCDGTDDCGDNSDETS 666
+ C + +F+C C+ + +CD DC D SDE S
Sbjct: 1 KTCSQAEFRCHDGK-CISRQFVCDSDRDCLDGSDEAS 36
Score = 38.5 bits (90), Expect = 1e-04
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 907 RFCPEYKFQCASTHLCVEQSELCDGTDDCGDNSDETS 943
+ C + +F+C C+ + +CD DC D SDE S
Sbjct: 1 KTCSQAEFRCHDGK-CISRQFVCDSDRDCLDGSDEAS 36
Score = 38.1 bits (89), Expect = 2e-04
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 1002 SQYTCSNHKCIDRAALCNHVDDCGDLSDELGC 1033
+++ C + KCI R +C+ DC D SDE C
Sbjct: 6 AEFRCHDGKCISRQFVCDSDRDCLDGSDEASC 37
Score = 36.6 bits (85), Expect = 7e-04
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 678 HKCIPKWLFCDGKDDCRDGSDELPQNCP 705
KCI + CD DC DGSDE +CP
Sbjct: 13 GKCISRQFVCDSDRDCLDGSDE--ASCP 38
Score = 28.1 bits (63), Expect = 0.65
Identities = 10/17 (58%), Positives = 13/17 (76%)
Query: 98 KGWLCDHDNDCGDGSDE 114
+ ++CD D DC DGSDE
Sbjct: 18 RQFVCDSDRDCLDGSDE 34
>d1j8ea_ g.12.1.1 (A:) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 44
Score = 53.6 bits (129), Expect = 7e-10
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 547 RQCSESEFQCKNGKCIPAQWRCDHDEDCTDGSDEMEC 583
CS ++F+C +G+CIP W CD D DC D SDE
Sbjct: 3 HSCSSTQFKCNSGRCIPEHWTCDGDNDCGDYSDETHA 39
Score = 53.6 bits (129), Expect = 7e-10
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 749 RQCSESEFQCKNGKCIPAQWRCDHDEDCTDGSDEMEC 785
CS ++F+C +G+CIP W CD D DC D SDE
Sbjct: 3 HSCSSTQFKCNSGRCIPEHWTCDGDNDCGDYSDETHA 39
Score = 49.8 bits (119), Expect = 2e-08
Identities = 21/41 (51%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 379 CPDLEFKCASNGRCILNSWKCDGEPDCKDGSDEDPAMCHNR 419
C +FKC +GRCI W CDG+ DC D SDE A C N+
Sbjct: 5 CSSTQFKCN-SGRCIPEHWTCDGDNDCGDYSDETHANCTNQ 44
Score = 49.0 bits (117), Expect = 3e-08
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 339 RQCRAGSFQCDNGNCTPSASICDGVDDCRDGSDEKHC 375
C + F+C++G C P CDG +DC D SDE H
Sbjct: 3 HSCSSTQFKCNSGRCIPEHWTCDGDNDCGDYSDETHA 39
Score = 48.6 bits (116), Expect = 4e-08
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 123 RTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNCR 160
+CSS +F C + +CI + + CDG++DCGD SDE +
Sbjct: 3 HSCSSTQFKCNSGRCIPEHWTCDGDNDCGDYSDETHAN 40
Score = 48.6 bits (116), Expect = 4e-08
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 174 RTCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 210
+CSS +F C + +CI + + CDG++DCGD SDE +
Sbjct: 3 HSCSSTQFKCNSGRCIPEHWTCDGDNDCGDYSDETHA 39
Score = 48.2 bits (115), Expect = 6e-08
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 584 GGFQCKNGTFQCSSGHCIAAYFRCDGDRDCRDLSDEMNC 622
G C + F+C+SG CI ++ CDGD DC D SDE +
Sbjct: 1 GSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDYSDETHA 39
Score = 47.5 bits (113), Expect = 1e-07
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 418 NRPCDKDTEFACRNGHCIPKLWVCDFDNDCGDDSDEPAYMCRQR 461
+ C +F C +G CIP+ W CD DNDCGD SDE C +
Sbjct: 2 SHSCSST-QFKCNSGRCIPEHWTCDGDNDCGDYSDETHANCTNQ 44
Score = 44.8 bits (106), Expect = 9e-07
Identities = 18/36 (50%), Positives = 27/36 (75%)
Query: 1037 NSTCSSSQFRCNNGKCIDYHLVCNKESDCEDDSDEP 1072
+ +CSS+QF+CN+G+CI H C+ ++DC D SDE
Sbjct: 2 SHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDYSDET 37
Score = 44.4 bits (105), Expect = 1e-06
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 511 FQCKNNRCIPKRWMCDFENDCGDQSDEAEDLCA 543
F+C + RCIP+ W CD +NDCGD SDE C
Sbjct: 10 FKCNSGRCIPEHWTCDGDNDCGDYSDETHANCT 42
Score = 44.4 bits (105), Expect = 1e-06
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 713 FQCKNNRCIPKRWMCDFENDCGDQSDEAEDLCA 745
F+C + RCIP+ W CD +NDCGD SDE C
Sbjct: 10 FKCNSGRCIPEHWTCDGDNDCGDYSDETHANCT 42
Score = 43.6 bits (103), Expect = 2e-06
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 868 GTFQCSSGHCIAAYFRCDGDRDCRDLSDEMNC 899
F+C+SG CI ++ CDGD DC D SDE +
Sbjct: 8 TQFKCNSGRCIPEHWTCDGDNDCGDYSDETHA 39
Score = 42.8 bits (101), Expect = 4e-06
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 628 GGRFCPEYKFQCASTHLCVEQSELCDGTDDCGDNSDETSSLCSN 671
G C +F+C S C+ + CDG +DCGD SDET + C+N
Sbjct: 1 GSHSCSSTQFKCNSGR-CIPEHWTCDGDNDCGDYSDETHANCTN 43
Score = 42.8 bits (101), Expect = 4e-06
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 905 GGRFCPEYKFQCASTHLCVEQSELCDGTDDCGDNSDETSSLCSN 948
G C +F+C S C+ + CDG +DCGD SDET + C+N
Sbjct: 1 GSHSCSSTQFKCNSGR-CIPEHWTCDGDNDCGDYSDETHANCTN 43
Score = 41.7 bits (98), Expect = 1e-05
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 955 HKYQCDNGRCIASYQLCDGVDNCGDGSDENN 985
+++C++GRCI + CDG ++CGD SDE +
Sbjct: 8 TQFKCNSGRCIPEHWTCDGDNDCGDYSDETH 38
Score = 41.3 bits (97), Expect = 2e-05
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Query: 460 QRNCTKGWERCPGKTNYRCIPKWLFCDGKDDCRDGSDELPQNCPK 504
+C+ +C + RCIP+ CDG +DC D SDE NC
Sbjct: 2 SHSCSSTQFKC---NSGRCIPEHWTCDGDNDCGDYSDETHANCTN 43
Score = 40.1 bits (94), Expect = 4e-05
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 299 CTQGQHHCGGHDQKCIPWFWKCDGERDCGDGSDEP 333
C+ Q C +CIP W CDG+ DCGD SDE
Sbjct: 5 CSSTQFKCN--SGRCIPEHWTCDGDNDCGDYSDET 37
Score = 39.7 bits (93), Expect = 5e-05
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 831 GGFQCKNGTFQCSSGHCIAAYFRCDGDRDCRDLS 864
G C + F+C+SG CI ++ CDGD DC D S
Sbjct: 1 GSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDYS 34
Score = 38.2 bits (89), Expect = 2e-04
Identities = 14/28 (50%), Positives = 17/28 (60%)
Query: 679 KCIPKWLFCDGKDDCRDGSDELPQNCPK 706
+CIP+ CDG +DC D SDE NC
Sbjct: 16 RCIPEHWTCDGDNDCGDYSDETHANCTN 43
Score = 37.1 bits (86), Expect = 4e-04
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 1002 SQYTCSNHKCIDRAALCNHVDDCGDLSDELGC 1033
+Q+ C++ +CI C+ +DCGD SDE
Sbjct: 8 TQFKCNSGRCIPEHWTCDGDNDCGDYSDETHA 39
Score = 28.2 bits (63), Expect = 0.65
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Query: 98 KGWLCDHDNDCGDGSDE-GKECHDK 121
+ W CD DNDCGD SDE C ++
Sbjct: 20 EHWTCDGDNDCGDYSDETHANCTNQ 44
>d1f8za_ g.12.1.1 (A:) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 52.4 bits (126), Expect = 1e-09
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 549 CSESEFQCKNGKCIPAQWRCDHDEDCTDGSDEMEC 583
C EFQC +G CI +CD + DC D SDE+ C
Sbjct: 3 CRPDEFQCSDGNCIHGSRQCDREYDCKDMSDEVGC 37
Score = 52.4 bits (126), Expect = 1e-09
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 751 CSESEFQCKNGKCIPAQWRCDHDEDCTDGSDEMEC 785
C EFQC +G CI +CD + DC D SDE+ C
Sbjct: 3 CRPDEFQCSDGNCIHGSRQCDREYDCKDMSDEVGC 37
Score = 49.3 bits (118), Expect = 2e-08
Identities = 17/38 (44%), Positives = 21/38 (55%)
Query: 124 TCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNCRD 161
TC +EF C + CI + CD E DC D SDE C +
Sbjct: 2 TCRPDEFQCSDGNCIHGSRQCDREYDCKDMSDEVGCVN 39
Score = 49.3 bits (118), Expect = 2e-08
Identities = 17/36 (47%), Positives = 20/36 (55%)
Query: 175 TCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 210
TC +EF C + CI + CD E DC D SDE C
Sbjct: 2 TCRPDEFQCSDGNCIHGSRQCDREYDCKDMSDEVGC 37
Score = 47.8 bits (114), Expect = 6e-08
Identities = 17/35 (48%), Positives = 20/35 (57%)
Query: 341 CRAGSFQCDNGNCTPSASICDGVDDCRDGSDEKHC 375
CR FQC +GNC + CD DC+D SDE C
Sbjct: 3 CRPDEFQCSDGNCIHGSRQCDREYDCKDMSDEVGC 37
Score = 47.4 bits (113), Expect = 8e-08
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 588 CKNGTFQCSSGHCIAAYFRCDGDRDCRDLSDEMNC 622
C+ FQCS G+CI +CD + DC+D+SDE+ C
Sbjct: 3 CRPDEFQCSDGNCIHGSRQCDREYDCKDMSDEVGC 37
Score = 45.5 bits (108), Expect = 4e-07
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 1038 STCSSSQFRCNNGKCIDYHLVCNKESDCEDDSDE 1071
+TC +F+C++G CI C++E DC+D SDE
Sbjct: 1 ATCRPDEFQCSDGNCIHGSRQCDREYDCKDMSDE 34
Score = 44.7 bits (106), Expect = 8e-07
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 868 GTFQCSSGHCIAAYFRCDGDRDCRDLSDEMNC 899
FQCS G+CI +CD + DC+D+SDE+ C
Sbjct: 6 DEFQCSDGNCIHGSRQCDREYDCKDMSDEVGC 37
Score = 43.5 bits (103), Expect = 2e-06
Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 379 CPDLEFKCASNGRCILNSWKCDGEPDCKDGSDE 411
C EF+C+ +G CI S +CD E DCKD SDE
Sbjct: 3 CRPDEFQCS-DGNCIHGSRQCDREYDCKDMSDE 34
Score = 43.5 bits (103), Expect = 2e-06
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 423 KDTEFACRNGHCIPKLWVCDFDNDCGDDSDE 453
+ EF C +G+CI CD + DC D SDE
Sbjct: 4 RPDEFQCSDGNCIHGSRQCDREYDCKDMSDE 34
Score = 42.8 bits (101), Expect = 4e-06
Identities = 14/28 (50%), Positives = 15/28 (53%)
Query: 511 FQCKNNRCIPKRWMCDFENDCGDQSDEA 538
FQC + CI CD E DC D SDE
Sbjct: 8 FQCSDGNCIHGSRQCDREYDCKDMSDEV 35
Score = 42.8 bits (101), Expect = 4e-06
Identities = 14/28 (50%), Positives = 15/28 (53%)
Query: 713 FQCKNNRCIPKRWMCDFENDCGDQSDEA 740
FQC + CI CD E DC D SDE
Sbjct: 8 FQCSDGNCIHGSRQCDREYDCKDMSDEV 35
Score = 42.0 bits (99), Expect = 9e-06
Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Query: 297 ANCTQGQHHCGGHDQKCIPWFWKCDGERDCGDGSDE 332
A C + C D CI +CD E DC D SDE
Sbjct: 1 ATCRPDEFQCS--DGNCIHGSRQCDREYDCKDMSDE 34
Score = 42.0 bits (99), Expect = 9e-06
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 955 HKYQCDNGRCIASYQLCDGVDNCGDGSDENN 985
++QC +G CI + CD +C D SDE
Sbjct: 6 DEFQCSDGNCIHGSRQCDREYDCKDMSDEVG 36
Score = 38.5 bits (90), Expect = 1e-04
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 835 CKNGTFQCSSGHCIAAYFRCDGDRDCRDLS 864
C+ FQCS G+CI +CD + DC+D+S
Sbjct: 3 CRPDEFQCSDGNCIHGSRQCDREYDCKDMS 32
Score = 38.5 bits (90), Expect = 1e-04
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 1002 SQYTCSNHKCIDRAALCNHVDDCGDLSDELGC 1033
++ CS+ CI + C+ DC D+SDE+GC
Sbjct: 6 DEFQCSDGNCIHGSRQCDREYDCKDMSDEVGC 37
Score = 37.0 bits (86), Expect = 5e-04
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 632 CPEYKFQCASTHLCVEQSELCDGTDDCGDNSDET 665
C +FQC+ + C+ S CD DC D SDE
Sbjct: 3 CRPDEFQCSDGN-CIHGSRQCDREYDCKDMSDEV 35
Score = 37.0 bits (86), Expect = 5e-04
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 909 CPEYKFQCASTHLCVEQSELCDGTDDCGDNSDET 942
C +FQC+ + C+ S CD DC D SDE
Sbjct: 3 CRPDEFQCSDGN-CIHGSRQCDREYDCKDMSDEV 35
Score = 35.8 bits (83), Expect = 0.001
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Query: 462 NCTKGWERCPGKTNYRCIPKWLFCDGKDDCRDGSDEL 498
C +C ++ CI CD + DC+D SDE+
Sbjct: 2 TCRPDEFQC---SDGNCIHGSRQCDREYDCKDMSDEV 35
Score = 34.3 bits (79), Expect = 0.004
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 679 KCIPKWLFCDGKDDCRDGSDEL 700
CI CD + DC+D SDE+
Sbjct: 14 NCIHGSRQCDREYDCKDMSDEV 35
Score = 28.1 bits (63), Expect = 0.59
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 98 KGWLCDHDNDCGDGSDE 114
CD + DC D SDE
Sbjct: 18 GSRQCDREYDCKDMSDE 34
>d1xfea2 g.12.1.1 (A:1-44) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 44
Score = 52.5 bits (126), Expect = 2e-09
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 501 NCPKCHETTDFQCKNNRCIPKRWMCDFENDCGDQSDEAEDLC 542
N C F+C + CI +C+ DC D SDE C
Sbjct: 2 NVTLCEGPNKFKCHSGECITLDKVCNMARDCRDWSDEPIKEC 43
Score = 52.5 bits (126), Expect = 2e-09
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 703 NCPKCHETTDFQCKNNRCIPKRWMCDFENDCGDQSDEAEDLC 744
N C F+C + CI +C+ DC D SDE C
Sbjct: 2 NVTLCEGPNKFKCHSGECITLDKVCNMARDCRDWSDEPIKEC 43
Score = 51.3 bits (123), Expect = 5e-09
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 421 CDKDTEFACRNGHCIPKLWVCDFDNDCGDDSDEPAYMC 458
C+ +F C +G CI VC+ DC D SDEP C
Sbjct: 6 CEGPNKFKCHSGECITLDKVCNMARDCRDWSDEPIKEC 43
Score = 48.2 bits (115), Expect = 6e-08
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 549 CSESEFQCKNGKCIPAQWRCDHDEDCTDGSDEMEC 583
++F+C +G+CI C+ DC D SDE
Sbjct: 7 EGPNKFKCHSGECITLDKVCNMARDCRDWSDEPIK 41
Score = 48.2 bits (115), Expect = 6e-08
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 751 CSESEFQCKNGKCIPAQWRCDHDEDCTDGSDEMEC 785
++F+C +G+CI C+ DC D SDE
Sbjct: 7 EGPNKFKCHSGECITLDKVCNMARDCRDWSDEPIK 41
Score = 46.3 bits (110), Expect = 2e-07
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 375 CDLPCPDLEFKCASNGRCILNSWKCDGEPDCKDGSDEDPAMC 416
L +FKC +G CI C+ DC+D SDE C
Sbjct: 3 VTLCEGPNKFKCH-SGECITLDKVCNMARDCRDWSDEPIKEC 43
Score = 44.4 bits (105), Expect = 1e-06
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 951 CTSLHKYQCDNGRCIASYQLCDGVDNCGDGSDENN 985
C +K++C +G CI ++C+ +C D SDE
Sbjct: 6 CEGPNKFKCHSGECITLDKVCNMARDCRDWSDEPI 40
Score = 42.8 bits (101), Expect = 5e-06
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 341 CRAGSFQCDNGNCTPSASICDGVDDCRDGSDEKHCD 376
F+C +G C +C+ DCRD SDE +
Sbjct: 7 EGPNKFKCHSGECITLDKVCNMARDCRDWSDEPIKE 42
Score = 40.9 bits (96), Expect = 2e-05
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 1040 CSSSQFRCNNGKCIDYHLVCNKESDCEDDSDEPLH 1074
++F+C++G+CI VCN DC D SDEP+
Sbjct: 7 EGPNKFKCHSGECITLDKVCNMARDCRDWSDEPIK 41
Score = 40.9 bits (96), Expect = 2e-05
Identities = 15/32 (46%), Positives = 17/32 (53%)
Query: 591 GTFQCSSGHCIAAYFRCDGDRDCRDLSDEMNC 622
F+C SG CI C+ RDCRD SDE
Sbjct: 10 NKFKCHSGECITLDKVCNMARDCRDWSDEPIK 41
Score = 40.9 bits (96), Expect = 2e-05
Identities = 15/32 (46%), Positives = 17/32 (53%)
Query: 868 GTFQCSSGHCIAAYFRCDGDRDCRDLSDEMNC 899
F+C SG CI C+ RDCRD SDE
Sbjct: 10 NKFKCHSGECITLDKVCNMARDCRDWSDEPIK 41
Score = 40.5 bits (95), Expect = 3e-05
Identities = 12/38 (31%), Positives = 16/38 (42%)
Query: 125 CSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNCRDG 162
+F C + +CI C+ DC D SDE G
Sbjct: 7 EGPNKFKCHSGECITLDKVCNMARDCRDWSDEPIKECG 44
Score = 40.5 bits (95), Expect = 3e-05
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 176 CSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 210
+F C + +CI C+ DC D SDE
Sbjct: 7 EGPNKFKCHSGECITLDKVCNMARDCRDWSDEPIK 41
Score = 39.8 bits (93), Expect = 5e-05
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 475 NYRCIPKWLFCDGKDDCRDGSDELPQNC 502
+ CI C+ DCRD SDE + C
Sbjct: 16 SGECITLDKVCNMARDCRDWSDEPIKEC 43
Score = 39.4 bits (92), Expect = 6e-05
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 6/43 (13%)
Query: 297 ANCTQ----GQHHCGGHDQKCIPWFWKCDGERDCGDGSDEPMS 335
N T + C H +CI C+ RDC D SDEP+
Sbjct: 1 GNVTLCEGPNKFKC--HSGECITLDKVCNMARDCRDWSDEPIK 41
Score = 39.0 bits (91), Expect = 1e-04
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 679 KCIPKWLFCDGKDDCRDGSDELPQNC 704
+CI C+ DCRD SDE + C
Sbjct: 18 ECITLDKVCNMARDCRDWSDEPIKEC 43
Score = 38.6 bits (90), Expect = 1e-04
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 995 VKPCELYSQYTCSNHKCIDRAALCNHVDDCGDLSDELGCH 1034
V CE +++ C + +CI +CN DC D SDE
Sbjct: 3 VTLCEGPNKFKCHSGECITLDKVCNMARDCRDWSDEPIKE 42
Score = 37.1 bits (86), Expect = 6e-04
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 632 CPEYKFQCASTHLCVEQSELCDGTDDCGDNSDETSSLC 669
KF+C S C+ ++C+ DC D SDE C
Sbjct: 7 EGPNKFKCHSGE-CITLDKVCNMARDCRDWSDEPIKEC 43
Score = 37.1 bits (86), Expect = 6e-04
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 909 CPEYKFQCASTHLCVEQSELCDGTDDCGDNSDETSSLC 946
KF+C S C+ ++C+ DC D SDE C
Sbjct: 7 EGPNKFKCHSGE-CITLDKVCNMARDCRDWSDEPIKEC 43
Score = 35.5 bits (82), Expect = 0.002
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 838 GTFQCSSGHCIAAYFRCDGDRDCRDLS 864
F+C SG CI C+ RDCRD S
Sbjct: 10 NKFKCHSGECITLDKVCNMARDCRDWS 36
Score = 29.0 bits (65), Expect = 0.39
Identities = 7/21 (33%), Positives = 9/21 (42%)
Query: 810 ASNWRCDHDEDCTDGSDETEC 830
+ C+ DC D SDE
Sbjct: 21 TLDKVCNMARDCRDWSDEPIK 41
Score = 29.0 bits (65), Expect = 0.42
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 98 KGWLCDHDNDCGDGSDE 114
+C+ DC D SDE
Sbjct: 22 LDKVCNMARDCRDWSDE 38
>d1ajja_ g.12.1.1 (A:) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 37
Score = 51.7 bits (124), Expect = 3e-09
Identities = 19/35 (54%), Positives = 22/35 (62%)
Query: 549 CSESEFQCKNGKCIPAQWRCDHDEDCTDGSDEMEC 583
CS EF C +G+CI + WRCD DC D SDE C
Sbjct: 2 CSAFEFHCLSGECIHSSWRCDGGPDCKDKSDEENC 36
Score = 51.7 bits (124), Expect = 3e-09
Identities = 19/35 (54%), Positives = 22/35 (62%)
Query: 751 CSESEFQCKNGKCIPAQWRCDHDEDCTDGSDEMEC 785
CS EF C +G+CI + WRCD DC D SDE C
Sbjct: 2 CSAFEFHCLSGECIHSSWRCDGGPDCKDKSDEENC 36
Score = 48.2 bits (115), Expect = 4e-08
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 176 CSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNCS 211
CS+ EF C + +CI ++ CDG DC D+SDE NC+
Sbjct: 2 CSAFEFHCLSGECIHSSWRCDGGPDCKDKSDEENCA 37
Score = 47.0 bits (112), Expect = 1e-07
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 125 CSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 159
CS+ EF C + +CI ++ CDG DC D+SDE NC
Sbjct: 2 CSAFEFHCLSGECIHSSWRCDGGPDCKDKSDEENC 36
Score = 46.7 bits (111), Expect = 2e-07
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 341 CRAGSFQCDNGNCTPSASICDGVDDCRDGSDEKHC 375
C A F C +G C S+ CDG DC+D SDE++C
Sbjct: 2 CSAFEFHCLSGECIHSSWRCDGGPDCKDKSDEENC 36
Score = 46.3 bits (110), Expect = 2e-07
Identities = 19/35 (54%), Positives = 22/35 (62%)
Query: 588 CKNGTFQCSSGHCIAAYFRCDGDRDCRDLSDEMNC 622
C F C SG CI + +RCDG DC+D SDE NC
Sbjct: 2 CSAFEFHCLSGECIHSSWRCDGGPDCKDKSDEENC 36
Score = 45.9 bits (109), Expect = 3e-07
Identities = 21/35 (60%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 378 PCPDLEFKCASNGRCILNSWKCDGEPDCKDGSDED 412
PC EF C +G CI +SW+CDG PDCKD SDE+
Sbjct: 1 PCSAFEFHCL-SGECIHSSWRCDGGPDCKDKSDEE 34
Score = 44.0 bits (104), Expect = 1e-06
Identities = 17/34 (50%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 420 PCDKDTEFACRNGHCIPKLWVCDFDNDCGDDSDE 453
PC EF C +G CI W CD DC D SDE
Sbjct: 1 PCSAF-EFHCLSGECIHSSWRCDGGPDCKDKSDE 33
Score = 44.0 bits (104), Expect = 2e-06
Identities = 18/32 (56%), Positives = 21/32 (65%)
Query: 868 GTFQCSSGHCIAAYFRCDGDRDCRDLSDEMNC 899
F C SG CI + +RCDG DC+D SDE NC
Sbjct: 5 FEFHCLSGECIHSSWRCDGGPDCKDKSDEENC 36
Score = 42.0 bits (99), Expect = 7e-06
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 1040 CSSSQFRCNNGKCIDYHLVCNKESDCEDDSDE 1071
CS+ +F C +G+CI C+ DC+D SDE
Sbjct: 2 CSAFEFHCLSGECIHSSWRCDGGPDCKDKSDE 33
Score = 42.0 bits (99), Expect = 8e-06
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 511 FQCKNNRCIPKRWMCDFENDCGDQSDEA 538
F C + CI W CD DC D+SDE
Sbjct: 7 FHCLSGECIHSSWRCDGGPDCKDKSDEE 34
Score = 42.0 bits (99), Expect = 8e-06
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 713 FQCKNNRCIPKRWMCDFENDCGDQSDEA 740
F C + CI W CD DC D+SDE
Sbjct: 7 FHCLSGECIHSSWRCDGGPDCKDKSDEE 34
Score = 40.9 bits (96), Expect = 2e-05
Identities = 15/33 (45%), Positives = 19/33 (57%)
Query: 953 SLHKYQCDNGRCIASYQLCDGVDNCGDGSDENN 985
S ++ C +G CI S CDG +C D SDE N
Sbjct: 3 SAFEFHCLSGECIHSSWRCDGGPDCKDKSDEEN 35
Score = 40.1 bits (94), Expect = 4e-05
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 299 CTQGQHHCGGHDQKCIPWFWKCDGERDCGDGSDE 332
C+ + HC +CI W+CDG DC D SDE
Sbjct: 2 CSAFEFHCL--SGECIHSSWRCDGGPDCKDKSDE 33
Score = 37.8 bits (88), Expect = 2e-04
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 835 CKNGTFQCSSGHCIAAYFRCDGDRDCRDLSE 865
C F C SG CI + +RCDG DC+D S+
Sbjct: 2 CSAFEFHCLSGECIHSSWRCDGGPDCKDKSD 32
Score = 36.6 bits (85), Expect = 5e-04
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 1002 SQYTCSNHKCIDRAALCNHVDDCGDLSDELGC 1033
++ C + +CI + C+ DC D SDE C
Sbjct: 5 FEFHCLSGECIHSSWRCDGGPDCKDKSDEENC 36
Score = 35.9 bits (83), Expect = 0.001
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 632 CPEYKFQCASTHLCVEQSELCDGTDDCGDNSDE 664
C ++F C S C+ S CDG DC D SDE
Sbjct: 2 CSAFEFHCLSGE-CIHSSWRCDGGPDCKDKSDE 33
Score = 35.9 bits (83), Expect = 0.001
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 909 CPEYKFQCASTHLCVEQSELCDGTDDCGDNSDE 941
C ++F C S C+ S CDG DC D SDE
Sbjct: 2 CSAFEFHCLSGE-CIHSSWRCDGGPDCKDKSDE 33
Score = 34.7 bits (80), Expect = 0.003
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 3/35 (8%)
Query: 463 CTKGWERCPGKTNYRCIPKWLFCDGKDDCRDGSDE 497
C+ C + CI CDG DC+D SDE
Sbjct: 2 CSAFEFHC---LSGECIHSSWRCDGGPDCKDKSDE 33
Score = 33.2 bits (76), Expect = 0.010
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 679 KCIPKWLFCDGKDDCRDGSDE 699
+CI CDG DC+D SDE
Sbjct: 13 ECIHSSWRCDGGPDCKDKSDE 33
Score = 27.4 bits (61), Expect = 1.1
Identities = 9/17 (52%), Positives = 9/17 (52%)
Query: 98 KGWLCDHDNDCGDGSDE 114
W CD DC D SDE
Sbjct: 17 SSWRCDGGPDCKDKSDE 33
>d1f5ya1 g.12.1.1 (A:1-44) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 44
Score = 51.4 bits (123), Expect = 4e-09
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 548 QCSESEFQCKNGKCIPAQWRCDHDEDCTDGSDEMEC 583
+C +EFQC++GKCI +W CD +C DGSDE +
Sbjct: 7 RCERNEFQCQDGKCISYKWVCDGSAECQDGSDESQE 42
Score = 51.4 bits (123), Expect = 4e-09
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 750 QCSESEFQCKNGKCIPAQWRCDHDEDCTDGSDEMEC 785
+C +EFQC++GKCI +W CD +C DGSDE +
Sbjct: 7 RCERNEFQCQDGKCISYKWVCDGSAECQDGSDESQE 42
Score = 48.7 bits (116), Expect = 3e-08
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 335 SCPARQCRAGSFQCDNGNCTPSASICDGVDDCRDGSDEKHC 375
S +C FQC +G C +CDG +C+DGSDE
Sbjct: 2 SAVGDRCERNEFQCQDGKCISYKWVCDGSAECQDGSDESQE 42
Score = 46.7 bits (111), Expect = 2e-07
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 379 CPDLEFKCASNGRCILNSWKCDGEPDCKDGSDEDPAMC 416
C EF+C +G+CI W CDG +C+DGSDE C
Sbjct: 8 CERNEFQCQ-DGKCISYKWVCDGSAECQDGSDESQETC 44
Score = 46.3 bits (110), Expect = 3e-07
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 175 TCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNCS 211
C EF CQ+ KCI + CDG +C D SDE +
Sbjct: 7 RCERNEFQCQDGKCISYKWVCDGSAECQDGSDESQET 43
Score = 46.0 bits (109), Expect = 3e-07
Identities = 16/36 (44%), Positives = 19/36 (52%)
Query: 124 TCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 159
C EF CQ+ KCI + CDG +C D SDE
Sbjct: 7 RCERNEFQCQDGKCISYKWVCDGSAECQDGSDESQE 42
Score = 46.0 bits (109), Expect = 4e-07
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 587 QCKNGTFQCSSGHCIAAYFRCDGDRDCRDLSDEMNC 622
+C+ FQC G CI+ + CDG +C+D SDE
Sbjct: 7 RCERNEFQCQDGKCISYKWVCDGSAECQDGSDESQE 42
Score = 44.8 bits (106), Expect = 8e-07
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 511 FQCKNNRCIPKRWMCDFENDCGDQSDEAEDLC 542
FQC++ +CI +W+CD +C D SDE+++ C
Sbjct: 13 FQCQDGKCISYKWVCDGSAECQDGSDESQETC 44
Score = 44.8 bits (106), Expect = 8e-07
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 713 FQCKNNRCIPKRWMCDFENDCGDQSDEAEDLC 744
FQC++ +CI +W+CD +C D SDE+++ C
Sbjct: 13 FQCQDGKCISYKWVCDGSAECQDGSDESQETC 44
Score = 44.4 bits (105), Expect = 1e-06
Identities = 16/35 (45%), Positives = 19/35 (54%)
Query: 424 DTEFACRNGHCIPKLWVCDFDNDCGDDSDEPAYMC 458
EF C++G CI WVCD +C D SDE C
Sbjct: 10 RNEFQCQDGKCISYKWVCDGSAECQDGSDESQETC 44
Score = 44.0 bits (104), Expect = 2e-06
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 1037 NSTCSSSQFRCNNGKCIDYHLVCNKESDCEDDSDE 1071
C ++F+C +GKCI Y VC+ ++C+D SDE
Sbjct: 5 GDRCERNEFQCQDGKCISYKWVCDGSAECQDGSDE 39
Score = 42.9 bits (101), Expect = 4e-06
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 868 GTFQCSSGHCIAAYFRCDGDRDCRDLSDEMNC 899
FQC G CI+ + CDG +C+D SDE
Sbjct: 11 NEFQCQDGKCISYKWVCDGSAECQDGSDESQE 42
Score = 40.6 bits (95), Expect = 2e-05
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 955 HKYQCDNGRCIASYQLCDGVDNCGDGSDENN 985
+++QC +G+CI+ +CDG C DGSDE+
Sbjct: 11 NEFQCQDGKCISYKWVCDGSAECQDGSDESQ 41
Score = 40.2 bits (94), Expect = 4e-05
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 298 NCTQGQHHCGGHDQKCIPWFWKCDGERDCGDGSDE 332
C + + C D KCI + W CDG +C DGSDE
Sbjct: 7 RCERNEFQC--QDGKCISYKWVCDGSAECQDGSDE 39
Score = 38.6 bits (90), Expect = 1e-04
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 632 CPEYKFQCASTHLCVEQSELCDGTDDCGDNSDETSSLC 669
C +FQC C+ +CDG+ +C D SDE+ C
Sbjct: 8 CERNEFQCQDGK-CISYKWVCDGSAECQDGSDESQETC 44
Score = 38.6 bits (90), Expect = 1e-04
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 909 CPEYKFQCASTHLCVEQSELCDGTDDCGDNSDETSSLC 946
C +FQC C+ +CDG+ +C D SDE+ C
Sbjct: 8 CERNEFQCQDGK-CISYKWVCDGSAECQDGSDESQETC 44
Score = 37.9 bits (88), Expect = 2e-04
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Query: 458 CRQRNCTKGWERCPGKTNYRCIPKWLFCDGKDDCRDGSDELPQNC 502
C + +C + +CI CDG +C+DGSDE + C
Sbjct: 3 AVGDRCERNEFQC---QDGKCISYKWVCDGSAECQDGSDESQETC 44
Score = 37.9 bits (88), Expect = 3e-04
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 834 QCKNGTFQCSSGHCIAAYFRCDGDRDCRDLSE 865
+C+ FQC G CI+ + CDG +C+D S+
Sbjct: 7 RCERNEFQCQDGKCISYKWVCDGSAECQDGSD 38
Score = 35.9 bits (83), Expect = 0.001
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 679 KCIPKWLFCDGKDDCRDGSDELPQNC 704
KCI CDG +C+DGSDE + C
Sbjct: 19 KCISYKWVCDGSAECQDGSDESQETC 44
Score = 35.2 bits (81), Expect = 0.002
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 1002 SQYTCSNHKCIDRAALCNHVDDCGDLSDELGCH 1034
+++ C + KCI +C+ +C D SDE
Sbjct: 11 NEFQCQDGKCISYKWVCDGSAECQDGSDESQET 43
Score = 27.5 bits (61), Expect = 1.2
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 98 KGWLCDHDNDCGDGSDE 114
W+CD +C DGSDE
Sbjct: 23 YKWVCDGSAECQDGSDE 39
>d2fcwb2 g.12.1.1 (B:125-163) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 50.5 bits (121), Expect = 7e-09
Identities = 18/35 (51%), Positives = 21/35 (60%)
Query: 549 CSESEFQCKNGKCIPAQWRCDHDEDCTDGSDEMEC 583
C + FQC + CIP W CD+D DC DGSDE
Sbjct: 3 CGPASFQCNSSTCIPQLWACDNDPDCEDGSDEWPQ 37
Score = 50.5 bits (121), Expect = 7e-09
Identities = 18/35 (51%), Positives = 21/35 (60%)
Query: 751 CSESEFQCKNGKCIPAQWRCDHDEDCTDGSDEMEC 785
C + FQC + CIP W CD+D DC DGSDE
Sbjct: 3 CGPASFQCNSSTCIPQLWACDNDPDCEDGSDEWPQ 37
Score = 50.2 bits (120), Expect = 1e-08
Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 377 LPCPDLEFKCASNGRCILNSWKCDGEPDCKDGSDEDPAMC 416
L C F+C + CI W CD +PDC+DGSDE P C
Sbjct: 1 LTCGPASFQCN-SSTCIPQLWACDNDPDCEDGSDEWPQRC 39
Score = 46.3 bits (110), Expect = 2e-07
Identities = 17/35 (48%), Positives = 19/35 (54%)
Query: 424 DTEFACRNGHCIPKLWVCDFDNDCGDDSDEPAYMC 458
F C + CIP+LW CD D DC D SDE C
Sbjct: 5 PASFQCNSSTCIPQLWACDNDPDCEDGSDEWPQRC 39
Score = 46.3 bits (110), Expect = 3e-07
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 124 TCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 159
TC F C + CI + + CD + DC D SDE+
Sbjct: 2 TCGPASFQCNSSTCIPQLWACDNDPDCEDGSDEWPQ 37
Score = 46.3 bits (110), Expect = 3e-07
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 175 TCSSEEFACQNFKCIRKTYHCDGEDDCGDRSDEFNC 210
TC F C + CI + + CD + DC D SDE+
Sbjct: 2 TCGPASFQCNSSTCIPQLWACDNDPDCEDGSDEWPQ 37
Score = 45.9 bits (109), Expect = 3e-07
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 511 FQCKNNRCIPKRWMCDFENDCGDQSDEAEDLC 542
FQC ++ CIP+ W CD + DC D SDE C
Sbjct: 8 FQCNSSTCIPQLWACDNDPDCEDGSDEWPQRC 39
Score = 45.9 bits (109), Expect = 3e-07
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 713 FQCKNNRCIPKRWMCDFENDCGDQSDEAEDLC 744
FQC ++ CIP+ W CD + DC D SDE C
Sbjct: 8 FQCNSSTCIPQLWACDNDPDCEDGSDEWPQRC 39
Score = 45.9 bits (109), Expect = 3e-07
Identities = 16/35 (45%), Positives = 18/35 (51%)
Query: 341 CRAGSFQCDNGNCTPSASICDGVDDCRDGSDEKHC 375
C SFQC++ C P CD DC DGSDE
Sbjct: 3 CGPASFQCNSSTCIPQLWACDNDPDCEDGSDEWPQ 37
Score = 44.8 bits (106), Expect = 9e-07
Identities = 16/35 (45%), Positives = 19/35 (54%)
Query: 588 CKNGTFQCSSGHCIAAYFRCDGDRDCRDLSDEMNC 622
C +FQC+S CI + CD D DC D SDE
Sbjct: 3 CGPASFQCNSSTCIPQLWACDNDPDCEDGSDEWPQ 37
Score = 44.4 bits (105), Expect = 1e-06
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 1039 TCSSSQFRCNNGKCIDYHLVCNKESDCEDDSDEP 1072
TC + F+CN+ CI C+ + DCED SDE
Sbjct: 2 TCGPASFQCNSSTCIPQLWACDNDPDCEDGSDEW 35
Score = 42.1 bits (99), Expect = 8e-06
Identities = 15/32 (46%), Positives = 18/32 (56%)
Query: 868 GTFQCSSGHCIAAYFRCDGDRDCRDLSDEMNC 899
+FQC+S CI + CD D DC D SDE
Sbjct: 6 ASFQCNSSTCIPQLWACDNDPDCEDGSDEWPQ 37
Score = 41.3 bits (97), Expect = 1e-05
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 955 HKYQCDNGRCIASYQLCDGVDNCGDGSDENN 985
+QC++ CI CD +C DGSDE
Sbjct: 6 ASFQCNSSTCIPQLWACDNDPDCEDGSDEWP 36
Score = 40.5 bits (95), Expect = 3e-05
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 463 CTKGWERCPGKTNYRCIPKWLFCDGKDDCRDGSDELPQNC 502
C +C + CIP+ CD DC DGSDE PQ C
Sbjct: 3 CGPASFQC---NSSTCIPQLWACDNDPDCEDGSDEWPQRC 39
Score = 40.1 bits (94), Expect = 3e-05
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 632 CPEYKFQCASTHLCVEQSELCDGTDDCGDNSDETSSLC 669
C FQC S+ C+ Q CD DC D SDE C
Sbjct: 3 CGPASFQCNSST-CIPQLWACDNDPDCEDGSDEWPQRC 39
Score = 40.1 bits (94), Expect = 3e-05
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 909 CPEYKFQCASTHLCVEQSELCDGTDDCGDNSDETSSLC 946
C FQC S+ C+ Q CD DC D SDE C
Sbjct: 3 CGPASFQCNSST-CIPQLWACDNDPDCEDGSDEWPQRC 39
Score = 40.1 bits (94), Expect = 3e-05
Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 299 CTQGQHHCGGHDQKCIPWFWKCDGERDCGDGSDEP 333
C C CIP W CD + DC DGSDE
Sbjct: 3 CGPASFQCN--SSTCIPQLWACDNDPDCEDGSDEW 35
Score = 39.0 bits (91), Expect = 9e-05
Identities = 15/27 (55%), Positives = 16/27 (59%)
Query: 678 HKCIPKWLFCDGKDDCRDGSDELPQNC 704
CIP+ CD DC DGSDE PQ C
Sbjct: 13 STCIPQLWACDNDPDCEDGSDEWPQRC 39
Score = 38.6 bits (90), Expect = 1e-04
Identities = 14/30 (46%), Positives = 17/30 (56%)
Query: 835 CKNGTFQCSSGHCIAAYFRCDGDRDCRDLS 864
C +FQC+S CI + CD D DC D S
Sbjct: 3 CGPASFQCNSSTCIPQLWACDNDPDCEDGS 32
Score = 35.9 bits (83), Expect = 0.001
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 1002 SQYTCSNHKCIDRAALCNHVDDCGDLSDELGCH 1034
+ + C++ CI + C++ DC D SDE
Sbjct: 6 ASFQCNSSTCIPQLWACDNDPDCEDGSDEWPQR 38
Score = 28.6 bits (64), Expect = 0.43
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 98 KGWLCDHDNDCGDGSDEGKE 117
+ W CD+D DC DGSDE +
Sbjct: 18 QLWACDNDPDCEDGSDEWPQ 37
>d1cr8a_ g.12.1.1 (A:) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 42
Score = 49.0 bits (117), Expect = 2e-08
Identities = 17/34 (50%), Positives = 21/34 (61%)
Query: 379 CPDLEFKCASNGRCILNSWKCDGEPDCKDGSDED 412
C EF+C +G CI W+CDG+ DC D SDE
Sbjct: 4 CHTDEFQCRLDGLCIPLRWRCDGDTDCMDSSDEK 37
Score = 49.0 bits (117), Expect = 3e-08
Identities = 22/38 (57%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 549 CSESEFQCK-NGKCIPAQWRCDHDEDCTDGSDEMECGG 585
C EFQC+ +G CIP +WRCD D DC D SDE C G
Sbjct: 4 CHTDEFQCRLDGLCIPLRWRCDGDTDCMDSSDEKSCEG 41
Score = 49.0 bits (117), Expect = 3e-08
Identities = 22/38 (57%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 751 CSESEFQCK-NGKCIPAQWRCDHDEDCTDGSDEMECGG 787
C EFQC+ +G CIP +WRCD D DC D SDE C G
Sbjct: 4 CHTDEFQCRLDGLCIPLRWRCDGDTDCMDSSDEKSCEG 41
Score = 44.4 bits (105), Expect = 1e-06
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 174 RTCSSEEFACQ-NFKCIRKTYHCDGEDDCGDRSDEFNCS 211
C ++EF C+ + CI + CDG+ DC D SDE +C
Sbjct: 2 GGCHTDEFQCRLDGLCIPLRWRCDGDTDCMDSSDEKSCE 40
Score = 44.4 bits (105), Expect = 1e-06
Identities = 19/37 (51%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 588 CKNGTFQC-SSGHCIAAYFRCDGDRDCRDLSDEMNCP 623
C FQC G CI +RCDGD DC D SDE +C
Sbjct: 4 CHTDEFQCRLDGLCIPLRWRCDGDTDCMDSSDEKSCE 40
Score = 44.4 bits (105), Expect = 1e-06
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 123 RTCSSEEFACQ-NFKCIRKTYHCDGEDDCGDRSDEFNCR 160
C ++EF C+ + CI + CDG+ DC D SDE +C
Sbjct: 2 GGCHTDEFQCRLDGLCIPLRWRCDGDTDCMDSSDEKSCE 40
Score = 43.6 bits (103), Expect = 2e-06
Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 341 CRAGSFQC-DNGNCTPSASICDGVDDCRDGSDEKHCD 376
C FQC +G C P CDG DC D SDEK C+
Sbjct: 4 CHTDEFQCRLDGLCIPLRWRCDGDTDCMDSSDEKSCE 40
Score = 41.7 bits (98), Expect = 1e-05
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 299 CTQGQHHCGGHDQKCIPWFWKCDGERDCGDGSDE 332
C + C D CIP W+CDG+ DC D SDE
Sbjct: 4 CHTDEFQCRL-DGLCIPLRWRCDGDTDCMDSSDE 36
Score = 41.7 bits (98), Expect = 1e-05
Identities = 18/34 (52%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 868 GTFQC-SSGHCIAAYFRCDGDRDCRDLSDEMNCP 900
FQC G CI +RCDGD DC D SDE +C
Sbjct: 7 DEFQCRLDGLCIPLRWRCDGDTDCMDSSDEKSCE 40
Score = 40.2 bits (94), Expect = 3e-05
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 1038 STCSSSQFRC-NNGKCIDYHLVCNKESDCEDDSDE 1071
C + +F+C +G CI C+ ++DC D SDE
Sbjct: 2 GGCHTDEFQCRLDGLCIPLRWRCDGDTDCMDSSDE 36
Score = 40.2 bits (94), Expect = 4e-05
Identities = 16/35 (45%), Positives = 19/35 (54%)
Query: 632 CPEYKFQCASTHLCVEQSELCDGTDDCGDNSDETS 666
C +FQC LC+ CDG DC D+SDE S
Sbjct: 4 CHTDEFQCRLDGLCIPLRWRCDGDTDCMDSSDEKS 38
Score = 40.2 bits (94), Expect = 4e-05
Identities = 16/35 (45%), Positives = 19/35 (54%)
Query: 909 CPEYKFQCASTHLCVEQSELCDGTDDCGDNSDETS 943
C +FQC LC+ CDG DC D+SDE S
Sbjct: 4 CHTDEFQCRLDGLCIPLRWRCDGDTDCMDSSDEKS 38
Score = 38.6 bits (90), Expect = 1e-04
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query: 511 FQCKNN-RCIPKRWMCDFENDCGDQSDEA 538
FQC+ + CIP RW CD + DC D SDE
Sbjct: 9 FQCRLDGLCIPLRWRCDGDTDCMDSSDEK 37
Score = 38.6 bits (90), Expect = 1e-04
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query: 713 FQCKNN-RCIPKRWMCDFENDCGDQSDEA 740
FQC+ + CIP RW CD + DC D SDE
Sbjct: 9 FQCRLDGLCIPLRWRCDGDTDCMDSSDEK 37
Score = 38.6 bits (90), Expect = 1e-04
Identities = 18/31 (58%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 424 DTEFACR-NGHCIPKLWVCDFDNDCGDDSDE 453
EF CR +G CIP W CD D DC D SDE
Sbjct: 6 TDEFQCRLDGLCIPLRWRCDGDTDCMDSSDE 36
Score = 37.9 bits (88), Expect = 3e-04
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Query: 463 CTKGWERCPGKTNYRCIPKWLFCDGKDDCRDGSDELPQNCP 503
C +C + + CIP CDG DC D SDE ++C
Sbjct: 4 CHTDEFQC--RLDGLCIPLRWRCDGDTDCMDSSDE--KSCE 40
Score = 37.1 bits (86), Expect = 5e-04
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Query: 674 CTSLHKCIPKWLFCDGKDDCRDGSDELPQNCP 705
C CIP CDG DC D SDE ++C
Sbjct: 11 CRLDGLCIPLRWRCDGDTDCMDSSDE--KSCE 40
Score = 36.7 bits (85), Expect = 7e-04
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 959 CDNGRCIASYQLCDGVDNCGDGSDENN 985
+G CI CDG +C D SDE +
Sbjct: 12 RLDGLCIPLRWRCDGDTDCMDSSDEKS 38
Score = 34.8 bits (80), Expect = 0.003
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 835 CKNGTFQC-SSGHCIAAYFRCDGDRDCRDLSE 865
C FQC G CI +RCDGD DC D S+
Sbjct: 4 CHTDEFQCRLDGLCIPLRWRCDGDTDCMDSSD 35
Score = 32.9 bits (75), Expect = 0.013
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 1002 SQYTC-SNHKCIDRAALCNHVDDCGDLSDELGC 1033
++ C + CI C+ DC D SDE C
Sbjct: 7 DEFQCRLDGLCIPLRWRCDGDTDCMDSSDEKSC 39
Score = 30.9 bits (70), Expect = 0.062
Identities = 13/22 (59%), Positives = 13/22 (59%)
Query: 811 SNWRCDHDEDCTDGSDETECGG 832
WRCD D DC D SDE C G
Sbjct: 20 LRWRCDGDTDCMDSSDEKSCEG 41
Score = 27.8 bits (62), Expect = 0.90
Identities = 10/15 (66%), Positives = 10/15 (66%)
Query: 100 WLCDHDNDCGDGSDE 114
W CD D DC D SDE
Sbjct: 22 WRCDGDTDCMDSSDE 36
>d2gtlo2 g.12.1.1 (O:60-100) Extracellular hemoglobin linker l3
subunit {Common earthworm (Lumbricus terrestris) [TaxId:
6398]}
Length = 41
Score = 48.7 bits (116), Expect = 4e-08
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 298 NCTQGQHHCGGHDQKCIPWFWKCDGERDCGDGSDE 332
+C + +H CGG D +CI + CDG DC +G DE
Sbjct: 2 SCDEHEHQCGGDDPQCISKLFVCDGHNDCRNGEDE 36
Score = 47.5 bits (113), Expect = 8e-08
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 549 CSESEFQCK--NGKCIPAQWRCDHDEDCTDGSDEMEC 583
C E E QC + +CI + CD DC +G DE +C
Sbjct: 3 CDEHEHQCGGDDPQCISKLFVCDGHNDCRNGEDEKDC 39
Score = 47.5 bits (113), Expect = 8e-08
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 751 CSESEFQCK--NGKCIPAQWRCDHDEDCTDGSDEMEC 785
C E E QC + +CI + CD DC +G DE +C
Sbjct: 3 CDEHEHQCGGDDPQCISKLFVCDGHNDCRNGEDEKDC 39
Score = 45.6 bits (108), Expect = 4e-07
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 175 TCSSEEFAC--QNFKCIRKTYHCDGEDDCGDRSDEFNCS 211
+C E C + +CI K + CDG +DC + DE +C+
Sbjct: 2 SCDEHEHQCGGDDPQCISKLFVCDGHNDCRNGEDEKDCT 40
Score = 44.8 bits (106), Expect = 9e-07
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 124 TCSSEEFAC--QNFKCIRKTYHCDGEDDCGDRSDEFNC 159
+C E C + +CI K + CDG +DC + DE +C
Sbjct: 2 SCDEHEHQCGGDDPQCISKLFVCDGHNDCRNGEDEKDC 39
Score = 44.4 bits (105), Expect = 1e-06
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 379 CPDLEFKCAS-NGRCILNSWKCDGEPDCKDGSDE 411
C + E +C + +CI + CDG DC++G DE
Sbjct: 3 CDEHEHQCGGDDPQCISKLFVCDGHNDCRNGEDE 36
Score = 42.5 bits (100), Expect = 5e-06
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 341 CRAGSFQC--DNGNCTPSASICDGVDDCRDGSDEKHCDL 377
C QC D+ C +CDG +DCR+G DEK C L
Sbjct: 3 CDEHEHQCGGDDPQCISKLFVCDGHNDCRNGEDEKDCTL 41
Score = 41.7 bits (98), Expect = 1e-05
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 588 CKNGTFQCSS--GHCIAAYFRCDGDRDCRDLSDEMNC 622
C QC CI+ F CDG DCR+ DE +C
Sbjct: 3 CDEHEHQCGGDDPQCISKLFVCDGHNDCRNGEDEKDC 39
Score = 39.4 bits (92), Expect = 7e-05
Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 1039 TCSSSQFRC--NNGKCIDYHLVCNKESDCEDDSDE 1071
+C + +C ++ +CI VC+ +DC + DE
Sbjct: 2 SCDEHEHQCGGDDPQCISKLFVCDGHNDCRNGEDE 36
Score = 39.0 bits (91), Expect = 9e-05
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 868 GTFQCSS--GHCIAAYFRCDGDRDCRDLSDEMNC 899
QC CI+ F CDG DCR+ DE +C
Sbjct: 6 HEHQCGGDDPQCISKLFVCDGHNDCRNGEDEKDC 39
Score = 38.3 bits (89), Expect = 2e-04
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 424 DTEFACR--NGHCIPKLWVCDFDNDCGDDSDE 453
+ E C + CI KL+VCD NDC + DE
Sbjct: 5 EHEHQCGGDDPQCISKLFVCDGHNDCRNGEDE 36
Score = 38.3 bits (89), Expect = 2e-04
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Query: 503 PKCHETTDFQCK--NNRCIPKRWMCDFENDCGDQSDEA 538
P C E QC + +CI K ++CD NDC + DE
Sbjct: 1 PSCDEHE-HQCGGDDPQCISKLFVCDGHNDCRNGEDEK 37
Score = 38.3 bits (89), Expect = 2e-04
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Query: 705 PKCHETTDFQCK--NNRCIPKRWMCDFENDCGDQSDEA 740
P C E QC + +CI K ++CD NDC + DE
Sbjct: 1 PSCDEHE-HQCGGDDPQCISKLFVCDGHNDCRNGEDEK 37
Score = 37.9 bits (88), Expect = 3e-04
Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Query: 950 NCTSLHKYQC--DNGRCIASYQLCDGVDNCGDGSDENNLTL 988
+C H++QC D+ +CI+ +CDG ++C +G DE + TL
Sbjct: 2 SCDE-HEHQCGGDDPQCISKLFVCDGHNDCRNGEDEKDCTL 41
Score = 36.3 bits (84), Expect = 0.001
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 462 NCTKGWERCPGKTNYRCIPKWLFCDGKDDCRDGSDELPQNC 502
+C + +C G + +CI K CDG +DCR+G DE ++C
Sbjct: 2 SCDEHEHQCGG-DDPQCISKLFVCDGHNDCRNGEDE--KDC 39
Score = 35.9 bits (83), Expect = 0.001
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 632 CPEYKFQCAS-THLCVEQSELCDGTDDCGDNSDETS 666
C E++ QC C+ + +CDG +DC + DE
Sbjct: 3 CDEHEHQCGGDDPQCISKLFVCDGHNDCRNGEDEKD 38
Score = 35.9 bits (83), Expect = 0.001
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 909 CPEYKFQCAS-THLCVEQSELCDGTDDCGDNSDETS 943
C E++ QC C+ + +CDG +DC + DE
Sbjct: 3 CDEHEHQCGGDDPQCISKLFVCDGHNDCRNGEDEKD 38
Score = 33.2 bits (76), Expect = 0.011
Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 835 CKNGTFQCSS--GHCIAAYFRCDGDRDCRDLSE 865
C QC CI+ F CDG DCR+ +
Sbjct: 3 CDEHEHQCGGDDPQCISKLFVCDGHNDCRNGED 35
Score = 32.9 bits (75), Expect = 0.013
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
Query: 679 KCIPKWLFCDGKDDCRDGSDELPQNC 704
+CI K CDG +DCR+G DE ++C
Sbjct: 16 QCISKLFVCDGHNDCRNGEDE--KDC 39
Score = 32.5 bits (74), Expect = 0.019
Identities = 9/34 (26%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 1002 SQYTC--SNHKCIDRAALCNHVDDCGDLSDELGC 1033
++ C + +CI + +C+ +DC + DE C
Sbjct: 6 HEHQCGGDDPQCISKLFVCDGHNDCRNGEDEKDC 39
Score = 29.8 bits (67), Expect = 0.16
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 810 ASNWRCDHDEDCTDGSDETEC 830
+ + CD DC +G DE +C
Sbjct: 19 SKLFVCDGHNDCRNGEDEKDC 39
Score = 27.9 bits (62), Expect = 1.0
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 100 WLCDHDNDCGDGSDE 114
++CD NDC +G DE
Sbjct: 22 FVCDGHNDCRNGEDE 36
>d2gtlm2 g.12.1.1 (M:60-101) Hemoglobin linker chain l1 {Common
earthworm (Lumbricus terrestris) [TaxId: 6398]}
Length = 42
Score = 48.3 bits (115), Expect = 5e-08
Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 379 CPDLEFKCASN-GRCILNSWKCDGEPDCKDGSDEDPAMC 416
C + E +C + CI + CDGE DC+DGSDEDP C
Sbjct: 3 CDEHESECRGDVPECIHDLLFCDGEKDCRDGSDEDPETC 41
Score = 46.8 bits (111), Expect = 2e-07
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 298 NCTQGQHHCGGHDQKCIPWFWKCDGERDCGDGSDEP 333
+C + + C G +CI CDGE+DC DGSDE
Sbjct: 2 HCDEHESECRGDVPECIHDLLFCDGEKDCRDGSDED 37
Score = 42.9 bits (101), Expect = 3e-06
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 549 CSESEFQCKN--GKCIPAQWRCDHDEDCTDGSDEMEC 583
C E E +C+ +CI CD ++DC DGSDE
Sbjct: 3 CDEHESECRGDVPECIHDLLFCDGEKDCRDGSDEDPE 39
Score = 42.9 bits (101), Expect = 3e-06
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 751 CSESEFQCKN--GKCIPAQWRCDHDEDCTDGSDEMEC 785
C E E +C+ +CI CD ++DC DGSDE
Sbjct: 3 CDEHESECRGDVPECIHDLLFCDGEKDCRDGSDEDPE 39
Score = 41.8 bits (98), Expect = 1e-05
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 511 FQCKNN--RCIPKRWMCDFENDCGDQSDEAEDLCA 543
+C+ + CI CD E DC D SDE + C+
Sbjct: 8 SECRGDVPECIHDLLFCDGEKDCRDGSDEDPETCS 42
Score = 41.8 bits (98), Expect = 1e-05
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 713 FQCKNN--RCIPKRWMCDFENDCGDQSDEAEDLCA 745
+C+ + CI CD E DC D SDE + C+
Sbjct: 8 SECRGDVPECIHDLLFCDGEKDCRDGSDEDPETCS 42
Score = 39.8 bits (93), Expect = 5e-05
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Query: 424 DTEFACRN--GHCIPKLWVCDFDNDCGDDSDEPAYMC 458
+ E CR CI L CD + DC D SDE C
Sbjct: 5 EHESECRGDVPECIHDLLFCDGEKDCRDGSDEDPETC 41
Score = 39.8 bits (93), Expect = 5e-05
Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 462 NCTKGWERCPGKTNYRCIPKWLFCDGKDDCRDGSDELPQNC 502
+C + C G CI LFCDG+ DCRDGSDE P+ C
Sbjct: 2 HCDEHESECRGDVP-ECIHDLLFCDGEKDCRDGSDEDPETC 41
Score = 38.7 bits (90), Expect = 1e-04
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 124 TCSSEEFACQNF--KCIRKTYHCDGEDDCGDRSDEFNC 159
C E C+ +CI CDGE DC D SDE
Sbjct: 2 HCDEHESECRGDVPECIHDLLFCDGEKDCRDGSDEDPE 39
Score = 38.7 bits (90), Expect = 1e-04
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 175 TCSSEEFACQNF--KCIRKTYHCDGEDDCGDRSDEFNC 210
C E C+ +CI CDGE DC D SDE
Sbjct: 2 HCDEHESECRGDVPECIHDLLFCDGEKDCRDGSDEDPE 39
Score = 38.7 bits (90), Expect = 1e-04
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 632 CPEYKFQCA-STHLCVEQSELCDGTDDCGDNSDETSSLCS 670
C E++ +C C+ CDG DC D SDE CS
Sbjct: 3 CDEHESECRGDVPECIHDLLFCDGEKDCRDGSDEDPETCS 42
Score = 38.7 bits (90), Expect = 1e-04
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 909 CPEYKFQCA-STHLCVEQSELCDGTDDCGDNSDETSSLCS 947
C E++ +C C+ CDG DC D SDE CS
Sbjct: 3 CDEHESECRGDVPECIHDLLFCDGEKDCRDGSDEDPETCS 42
Score = 37.9 bits (88), Expect = 2e-04
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Query: 588 CKNGTFQC--SSGHCIAAYFRCDGDRDCRDLSDEMNC 622
C +C CI CDG++DCRD SDE
Sbjct: 3 CDEHESECRGDVPECIHDLLFCDGEKDCRDGSDEDPE 39
Score = 37.5 bits (87), Expect = 3e-04
Identities = 14/37 (37%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
Query: 341 CRAGSFQCDN--GNCTPSASICDGVDDCRDGSDEKHC 375
C +C C CDG DCRDGSDE
Sbjct: 3 CDEHESECRGDVPECIHDLLFCDGEKDCRDGSDEDPE 39
Score = 36.0 bits (83), Expect = 0.001
Identities = 17/26 (65%), Positives = 20/26 (76%)
Query: 679 KCIPKWLFCDGKDDCRDGSDELPQNC 704
+CI LFCDG+ DCRDGSDE P+ C
Sbjct: 16 ECIHDLLFCDGEKDCRDGSDEDPETC 41
Score = 35.6 bits (82), Expect = 0.001
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Query: 1039 TCSSSQFRC--NNGKCIDYHLVCNKESDCEDDSDEP 1072
C + C + +CI L C+ E DC D SDE
Sbjct: 2 HCDEHESECRGDVPECIHDLLFCDGEKDCRDGSDED 37
Score = 35.2 bits (81), Expect = 0.002
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Query: 868 GTFQC--SSGHCIAAYFRCDGDRDCRDLSDEMNC 899
+C CI CDG++DCRD SDE
Sbjct: 6 HESECRGDVPECIHDLLFCDGEKDCRDGSDEDPE 39
Score = 34.1 bits (78), Expect = 0.005
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Query: 950 NCTSLHKYQCDN--GRCIASYQLCDGVDNCGDGSDENN 985
+C H+ +C CI CDG +C DGSDE+
Sbjct: 2 HCDE-HESECRGDVPECIHDLLFCDGEKDCRDGSDEDP 38
Score = 32.9 bits (75), Expect = 0.013
Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Query: 835 CKNGTFQC--SSGHCIAAYFRCDGDRDCRDLSE 865
C +C CI CDG++DCRD S+
Sbjct: 3 CDEHESECRGDVPECIHDLLFCDGEKDCRDGSD 35
Score = 27.9 bits (62), Expect = 0.98
Identities = 10/35 (28%), Positives = 13/35 (37%), Gaps = 2/35 (5%)
Query: 1002 SQYTCSNH--KCIDRAALCNHVDDCGDLSDELGCH 1034
+ C +CI C+ DC D SDE
Sbjct: 6 HESECRGDVPECIHDLLFCDGEKDCRDGSDEDPET 40
Score = 27.1 bits (60), Expect = 1.4
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 100 WLCDHDNDCGDGSDE 114
CD + DC DGSDE
Sbjct: 22 LFCDGEKDCRDGSDE 36
Score = 27.1 bits (60), Expect = 1.5
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 811 SNWRCDHDEDCTDGSDETEC 830
CD ++DC DGSDE
Sbjct: 20 DLLFCDGEKDCRDGSDEDPE 39
>d1f5ya2 g.12.1.1 (A:45-85) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 41
Score = 47.1 bits (112), Expect = 1e-07
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 548 QCSESEFQCK--NGKCIPAQWRCDHDEDCTDGSDEMEC 583
C +F C +CIP WRCD DC +GSDE C
Sbjct: 4 TCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGC 41
Score = 47.1 bits (112), Expect = 1e-07
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 750 QCSESEFQCK--NGKCIPAQWRCDHDEDCTDGSDEMEC 785
C +F C +CIP WRCD DC +GSDE C
Sbjct: 4 TCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGC 41
Score = 46.3 bits (110), Expect = 3e-07
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 299 CTQGQHHCGGHDQKCIPWFWKCDGERDCGDGSDE 332
C G CGG +CIP FW+CDG+ DC +GSDE
Sbjct: 5 CKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDE 38
Score = 44.0 bits (104), Expect = 1e-06
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 379 CPDLEFKCA-SNGRCILNSWKCDGEPDCKDGSDE 411
C +F C RCI W+CDG+ DC +GSDE
Sbjct: 5 CKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDE 38
Score = 44.0 bits (104), Expect = 1e-06
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 124 TCSSEEFAC--QNFKCIRKTYHCDGEDDCGDRSDEFNC 159
TC S +F+C + +CI + + CDG+ DC + SDE C
Sbjct: 4 TCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGC 41
Score = 44.0 bits (104), Expect = 1e-06
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 175 TCSSEEFAC--QNFKCIRKTYHCDGEDDCGDRSDEFNC 210
TC S +F+C + +CI + + CDG+ DC + SDE C
Sbjct: 4 TCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGC 41
Score = 42.9 bits (101), Expect = 4e-06
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 587 QCKNGTFQC--SSGHCIAAYFRCDGDRDCRDLSDEMNC 622
CK+G F C CI ++RCDG DC + SDE C
Sbjct: 4 TCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGC 41
Score = 41.7 bits (98), Expect = 9e-06
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 338 ARQCRAGSFQCDNGN--CTPSASICDGVDDCRDGSDEKHC 375
+ C++G F C C P CDG DC +GSDE+ C
Sbjct: 2 SVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGC 41
Score = 40.2 bits (94), Expect = 4e-05
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 868 GTFQC--SSGHCIAAYFRCDGDRDCRDLSDEMNC 899
G F C CI ++RCDG DC + SDE C
Sbjct: 8 GDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGC 41
Score = 39.4 bits (92), Expect = 6e-05
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 1037 NSTCSSSQFRC--NNGKCIDYHLVCNKESDCEDDSDE 1071
+ TC S F C +CI C+ + DC++ SDE
Sbjct: 2 SVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDE 38
Score = 38.6 bits (90), Expect = 1e-04
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Query: 423 KDTEFAC--RNGHCIPKLWVCDFDNDCGDDSDE 453
K +F+C R CIP+ W CD DC + SDE
Sbjct: 6 KSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDE 38
Score = 37.9 bits (88), Expect = 2e-04
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 511 FQCK--NNRCIPKRWMCDFENDCGDQSDEA 538
F C NRCIP+ W CD + DC + SDE
Sbjct: 10 FSCGGRVNRCIPQFWRCDGQVDCDNGSDEQ 39
Score = 37.9 bits (88), Expect = 2e-04
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 713 FQCK--NNRCIPKRWMCDFENDCGDQSDEA 740
F C NRCIP+ W CD + DC + SDE
Sbjct: 10 FSCGGRVNRCIPQFWRCDGQVDCDNGSDEQ 39
Score = 35.9 bits (83), Expect = 0.001
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 632 CPEYKFQCA-STHLCVEQSELCDGTDDCGDNSDE 664
C F C + C+ Q CDG DC + SDE
Sbjct: 5 CKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDE 38
Score = 35.9 bits (83), Expect = 0.001
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 909 CPEYKFQCA-STHLCVEQSELCDGTDDCGDNSDE 941
C F C + C+ Q CDG DC + SDE
Sbjct: 5 CKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDE 38
Score = 35.9 bits (83), Expect = 0.001
Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 463 CTKGWERCPGKTNYRCIPKWLFCDGKDDCRDGSDELPQNC 502
C G C G RCIP++ CDG+ DC +GSDE Q C
Sbjct: 5 CKSGDFSC-GGRVNRCIPQFWRCDGQVDCDNGSDE--QGC 41
Score = 35.5 bits (82), Expect = 0.002
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 957 YQCD--NGRCIASYQLCDGVDNCGDGSDENN 985
+ C RCI + CDG +C +GSDE
Sbjct: 10 FSCGGRVNRCIPQFWRCDGQVDCDNGSDEQG 40
Score = 34.0 bits (78), Expect = 0.005
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 834 QCKNGTFQC--SSGHCIAAYFRCDGDRDCRDLSE 865
CK+G F C CI ++RCDG DC + S+
Sbjct: 4 TCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSD 37
Score = 33.6 bits (77), Expect = 0.009
Identities = 14/27 (51%), Positives = 20/27 (74%), Gaps = 2/27 (7%)
Query: 678 HKCIPKWLFCDGKDDCRDGSDELPQNC 704
++CIP++ CDG+ DC +GSDE Q C
Sbjct: 17 NRCIPQFWRCDGQVDCDNGSDE--QGC 41
Score = 32.5 bits (74), Expect = 0.019
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 1002 SQYTC--SNHKCIDRAALCNHVDDCGDLSDELGC 1033
++C ++CI + C+ DC + SDE GC
Sbjct: 8 GDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGC 41
Score = 30.2 bits (68), Expect = 0.15
Identities = 11/20 (55%), Positives = 12/20 (60%)
Query: 811 SNWRCDHDEDCTDGSDETEC 830
WRCD DC +GSDE C
Sbjct: 22 QFWRCDGQVDCDNGSDEQGC 41
Score = 28.2 bits (63), Expect = 0.68
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 100 WLCDHDNDCGDGSDE 114
W CD DC +GSDE
Sbjct: 24 WRCDGQVDCDNGSDE 38
>d1k7ba_ g.12.1.1 (A:) soluble Tva ectodomain, sTva47 {Quail
(Coturnix coturnix) [TaxId: 9091]}
Length = 42
Score = 46.8 bits (111), Expect = 1e-07
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Query: 549 CSESEFQCKN-----GKCIPAQWRCDHDEDCTDGSDEMECG 584
C +F+C G+C P W CD DC DG DE CG
Sbjct: 2 CPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDEWGCG 42
Score = 46.8 bits (111), Expect = 1e-07
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Query: 751 CSESEFQCKN-----GKCIPAQWRCDHDEDCTDGSDEMECG 786
C +F+C G+C P W CD DC DG DE CG
Sbjct: 2 CPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDEWGCG 42
Score = 43.0 bits (101), Expect = 4e-06
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 5/41 (12%)
Query: 124 TCSSEEFACQNF-----KCIRKTYHCDGEDDCGDRSDEFNC 159
+C +F C +C + + CDG DC D DE+ C
Sbjct: 1 SCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDEWGC 41
Score = 43.0 bits (101), Expect = 4e-06
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 5/41 (12%)
Query: 175 TCSSEEFACQNF-----KCIRKTYHCDGEDDCGDRSDEFNC 210
+C +F C +C + + CDG DC D DE+ C
Sbjct: 1 SCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDEWGC 41
Score = 41.8 bits (98), Expect = 9e-06
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 379 CPDLEFKCAS----NGRCILNSWKCDGEPDCKDGSDE 411
CP +F+C+ +G C W CDG PDC DG DE
Sbjct: 2 CPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDE 38
Score = 41.4 bits (97), Expect = 1e-05
Identities = 18/41 (43%), Positives = 20/41 (48%)
Query: 335 SCPARQCRAGSFQCDNGNCTPSASICDGVDDCRDGSDEKHC 375
SCP Q R +G C P +CDG DC DG DE C
Sbjct: 1 SCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDEWGC 41
Score = 41.0 bits (96), Expect = 2e-05
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Query: 586 FQCKNGTFQCSSGHCIAAYFRCDGDRDCRDLSDEMNC 622
F+C + G C + CDG DC D DE C
Sbjct: 7 FRCSEPP--GAHGECYPQDWLCDGHPDCDDGRDEWGC 41
Score = 39.9 bits (93), Expect = 5e-05
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Query: 298 NCTQGQHHCGGHDQ---KCIPWFWKCDGERDCGDGSDE 332
+C GQ C +C P W CDG DC DG DE
Sbjct: 1 SCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDE 38
Score = 38.0 bits (88), Expect = 2e-04
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 5/37 (13%)
Query: 868 GTFQCS-----SGHCIAAYFRCDGDRDCRDLSDEMNC 899
G F+CS G C + CDG DC D DE C
Sbjct: 5 GQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDEWGC 41
Score = 37.2 bits (86), Expect = 5e-04
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 429 CRNGHCIPKLWVCDFDNDCGDDSDE 453
+G C P+ W+CD DC D DE
Sbjct: 14 GAHGECYPQDWLCDGHPDCDDGRDE 38
Score = 36.8 bits (85), Expect = 5e-04
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 509 TDFQCKNNRCIPKRWMCDFENDCGDQSDEA 538
++ + C P+ W+CD DC D DE
Sbjct: 10 SEPPGAHGECYPQDWLCDGHPDCDDGRDEW 39
Score = 36.8 bits (85), Expect = 5e-04
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 711 TDFQCKNNRCIPKRWMCDFENDCGDQSDEA 740
++ + C P+ W+CD DC D DE
Sbjct: 10 SEPPGAHGECYPQDWLCDGHPDCDDGRDEW 39
Score = 36.8 bits (85), Expect = 6e-04
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 5/38 (13%)
Query: 1039 TCSSSQFRCNN-----GKCIDYHLVCNKESDCEDDSDE 1071
+C QFRC+ G+C +C+ DC+D DE
Sbjct: 1 SCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDE 38
Score = 34.9 bits (80), Expect = 0.003
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 959 CDNGRCIASYQLCDGVDNCGDGSDENN 985
+G C LCDG +C DG DE
Sbjct: 14 GAHGECYPQDWLCDGHPDCDDGRDEWG 40
Score = 34.5 bits (79), Expect = 0.004
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Query: 462 NCTKGWERC--PGKTNYRCIPKWLFCDGKDDCRDGSDELPQNC 502
+C G RC P + C P+ CDG DC DG DE C
Sbjct: 1 SCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDE--WGC 41
Score = 33.3 bits (76), Expect = 0.009
Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
Query: 669 CSNMNCTSLHKCIPKWLFCDGKDDCRDGSDELPQNC 704
CS +C P+ CDG DC DG DE C
Sbjct: 9 CSEPPGAH-GECYPQDWLCDGHPDCDDGRDE--WGC 41
Score = 33.3 bits (76), Expect = 0.011
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
Query: 632 CPEYKFQCASTHL----CVEQSELCDGTDDCGDNSDE 664
CP +F+C+ C Q LCDG DC D DE
Sbjct: 2 CPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDE 38
Score = 33.3 bits (76), Expect = 0.011
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
Query: 909 CPEYKFQCASTHL----CVEQSELCDGTDDCGDNSDE 941
CP +F+C+ C Q LCDG DC D DE
Sbjct: 2 CPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDE 38
Score = 32.2 bits (73), Expect = 0.023
Identities = 10/33 (30%), Positives = 14/33 (42%), Gaps = 2/33 (6%)
Query: 833 FQCKNGTFQCSSGHCIAAYFRCDGDRDCRDLSE 865
F+C + G C + CDG DC D +
Sbjct: 7 FRCSEPP--GAHGECYPQDWLCDGHPDCDDGRD 37
Score = 31.4 bits (71), Expect = 0.050
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 811 SNWRCDHDEDCTDGSDETECG 831
+W CD DC DG DE CG
Sbjct: 22 QDWLCDGHPDCDDGRDEWGCG 42
Score = 31.0 bits (70), Expect = 0.067
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 1002 SQYTCSNHKCIDRAALCNHVDDCGDLSDELGC 1033
S+ ++ +C + LC+ DC D DE GC
Sbjct: 10 SEPPGAHGECYPQDWLCDGHPDCDDGRDEWGC 41
Score = 27.9 bits (62), Expect = 0.95
Identities = 10/15 (66%), Positives = 10/15 (66%)
Query: 100 WLCDHDNDCGDGSDE 114
WLCD DC DG DE
Sbjct: 24 WLCDGHPDCDDGRDE 38
>d1v9u5_ g.12.1.1 (5:) Very low-density lipoprotein receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 39
Score = 46.8 bits (111), Expect = 2e-07
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 549 CSESEFQCKNG--KCIPAQWRCDHDEDCTDGSDEMECG 584
C E C +CIP WRCD + DC G DE CG
Sbjct: 1 CRIHEISCGAHSTQCIPVSWRCDGENDCDSGEDEENCG 38
Score = 46.8 bits (111), Expect = 2e-07
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 751 CSESEFQCKNG--KCIPAQWRCDHDEDCTDGSDEMECG 786
C E C +CIP WRCD + DC G DE CG
Sbjct: 1 CRIHEISCGAHSTQCIPVSWRCDGENDCDSGEDEENCG 38
Score = 44.1 bits (104), Expect = 2e-06
Identities = 17/34 (50%), Positives = 20/34 (58%)
Query: 299 CTQGQHHCGGHDQKCIPWFWKCDGERDCGDGSDE 332
C + CG H +CIP W+CDGE DC G DE
Sbjct: 1 CRIHEISCGAHSTQCIPVSWRCDGENDCDSGEDE 34
Score = 42.1 bits (99), Expect = 7e-06
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 125 CSSEEFACQN--FKCIRKTYHCDGEDDCGDRSDEFNCRD 161
C E +C +CI ++ CDGE+DC DE NC +
Sbjct: 1 CRIHEISCGAHSTQCIPVSWRCDGENDCDSGEDEENCGN 39
Score = 42.1 bits (99), Expect = 8e-06
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 176 CSSEEFACQN--FKCIRKTYHCDGEDDCGDRSDEFNCS 211
C E +C +CI ++ CDGE+DC DE NC
Sbjct: 1 CRIHEISCGAHSTQCIPVSWRCDGENDCDSGEDEENCG 38
Score = 41.0 bits (96), Expect = 2e-05
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 588 CKNGTFQCSSGH--CIAAYFRCDGDRDCRDLSDEMNC 622
C+ C + CI +RCDG+ DC DE NC
Sbjct: 1 CRIHEISCGAHSTQCIPVSWRCDGENDCDSGEDEENC 37
Score = 41.0 bits (96), Expect = 2e-05
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 379 CPDLEFKCAS-NGRCILNSWKCDGEPDCKDGSDED 412
C E C + + +CI SW+CDGE DC G DE+
Sbjct: 1 CRIHEISCGAHSTQCIPVSWRCDGENDCDSGEDEE 35
Score = 41.0 bits (96), Expect = 2e-05
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 341 CRAGSFQCDNGN--CTPSASICDGVDDCRDGSDEKHC 375
CR C + C P + CDG +DC G DE++C
Sbjct: 1 CRIHEISCGAHSTQCIPVSWRCDGENDCDSGEDEENC 37
Score = 38.3 bits (89), Expect = 1e-04
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Query: 868 GTFQCSSGH--CIAAYFRCDGDRDCRDLSDEMNC 899
C + CI +RCDG+ DC DE NC
Sbjct: 4 HEISCGAHSTQCIPVSWRCDGENDCDSGEDEENC 37
Score = 37.1 bits (86), Expect = 4e-04
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Query: 426 EFACRNGH--CIPKLWVCDFDNDCGDDSDE 453
E +C CIP W CD +NDC DE
Sbjct: 5 EISCGAHSTQCIPVSWRCDGENDCDSGEDE 34
Score = 36.7 bits (85), Expect = 5e-04
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Query: 511 FQCKNN--RCIPKRWMCDFENDCGDQSDEA 538
C + +CIP W CD ENDC DE
Sbjct: 6 ISCGAHSTQCIPVSWRCDGENDCDSGEDEE 35
Score = 36.7 bits (85), Expect = 5e-04
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Query: 713 FQCKNN--RCIPKRWMCDFENDCGDQSDEA 740
C + +CIP W CD ENDC DE
Sbjct: 6 ISCGAHSTQCIPVSWRCDGENDCDSGEDEE 35
Score = 36.0 bits (83), Expect = 0.001
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Query: 1040 CSSSQFRCNNG--KCIDYHLVCNKESDCEDDSDE 1071
C + C +CI C+ E+DC+ DE
Sbjct: 1 CRIHEISCGAHSTQCIPVSWRCDGENDCDSGEDE 34
Score = 35.6 bits (82), Expect = 0.002
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 632 CPEYKFQCAS-THLCVEQSELCDGTDDCGDNSDE 664
C ++ C + + C+ S CDG +DC DE
Sbjct: 1 CRIHEISCGAHSTQCIPVSWRCDGENDCDSGEDE 34
Score = 35.6 bits (82), Expect = 0.002
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 909 CPEYKFQCAS-THLCVEQSELCDGTDDCGDNSDE 941
C ++ C + + C+ S CDG +DC DE
Sbjct: 1 CRIHEISCGAHSTQCIPVSWRCDGENDCDSGEDE 34
Score = 34.8 bits (80), Expect = 0.003
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 953 SLHKYQCDNG--RCIASYQLCDGVDNCGDGSDENN 985
+H+ C +CI CDG ++C G DE N
Sbjct: 2 RIHEISCGAHSTQCIPVSWRCDGENDCDSGEDEEN 36
Score = 32.9 bits (75), Expect = 0.011
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 463 CTKGWERCPGKTNYRCIPKWLFCDGKDDCRDGSDE 497
C C + +CIP CDG++DC G DE
Sbjct: 1 CRIHEISCGAHST-QCIPVSWRCDGENDCDSGEDE 34
Score = 32.5 bits (74), Expect = 0.016
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 678 HKCIPKWLFCDGKDDCRDGSDE 699
+CIP CDG++DC G DE
Sbjct: 13 TQCIPVSWRCDGENDCDSGEDE 34
Score = 32.5 bits (74), Expect = 0.017
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 835 CKNGTFQCSSGH--CIAAYFRCDGDRDCRDLSE 865
C+ C + CI +RCDG+ DC +
Sbjct: 1 CRIHEISCGAHSTQCIPVSWRCDGENDCDSGED 33
Score = 31.4 bits (71), Expect = 0.045
Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Query: 1002 SQYTCSN--HKCIDRAALCNHVDDCGDLSDELGC 1033
+ +C +CI + C+ +DC DE C
Sbjct: 4 HEISCGAHSTQCIPVSWRCDGENDCDSGEDEENC 37
Score = 30.6 bits (69), Expect = 0.10
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 811 SNWRCDHDEDCTDGSDETECG 831
+WRCD + DC G DE CG
Sbjct: 18 VSWRCDGENDCDSGEDEENCG 38
Score = 27.5 bits (61), Expect = 1.3
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 100 WLCDHDNDCGDGSDE 114
W CD +NDC G DE
Sbjct: 20 WRCDGENDCDSGEDE 34
>d2gtln2 g.12.1.1 (N:61-101) Extracellular hemoglobin linker l2
subunit {Common earthworm (Lumbricus terrestris) [TaxId:
6398]}
Length = 41
Score = 46.8 bits (111), Expect = 2e-07
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 379 CPDLEFKCASN-GRCILNSWKCDGEPDCKDGSDEDPAMC 416
C F+C N CI + CDG DC + DEDP +C
Sbjct: 2 CEKRTFQCGGNEQECISDLLVCDGHKDCHNAHDEDPDVC 40
Score = 46.4 bits (110), Expect = 2e-07
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 298 NCTQGQHHCGGHDQKCIPWFWKCDGERDCGDGSDE 332
+C + CGG++Q+CI CDG +DC + DE
Sbjct: 1 HCEKRTFQCGGNEQECISDLLVCDGHKDCHNAHDE 35
Score = 44.5 bits (105), Expect = 1e-06
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 548 QCSESEFQCKN--GKCIPAQWRCDHDEDCTDGSDEMEC 583
C + FQC +CI CD +DC + DE
Sbjct: 1 HCEKRTFQCGGNEQECISDLLVCDGHKDCHNAHDEDPD 38
Score = 44.5 bits (105), Expect = 1e-06
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 750 QCSESEFQCKN--GKCIPAQWRCDHDEDCTDGSDEMEC 785
C + FQC +CI CD +DC + DE
Sbjct: 1 HCEKRTFQCGGNEQECISDLLVCDGHKDCHNAHDEDPD 38
Score = 40.6 bits (95), Expect = 3e-05
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 511 FQCKNN--RCIPKRWMCDFENDCGDQSDEAEDLC 542
FQC N CI +CD DC + DE D+C
Sbjct: 7 FQCGGNEQECISDLLVCDGHKDCHNAHDEDPDVC 40
Score = 40.6 bits (95), Expect = 3e-05
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 713 FQCKNN--RCIPKRWMCDFENDCGDQSDEAEDLC 744
FQC N CI +CD DC + DE D+C
Sbjct: 7 FQCGGNEQECISDLLVCDGHKDCHNAHDEDPDVC 40
Score = 39.5 bits (92), Expect = 6e-05
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 587 QCKNGTFQC--SSGHCIAAYFRCDGDRDCRDLSDEMNC 622
C+ TFQC + CI+ CDG +DC + DE
Sbjct: 1 HCEKRTFQCGGNEQECISDLLVCDGHKDCHNAHDEDPD 38
Score = 39.1 bits (91), Expect = 9e-05
Identities = 12/38 (31%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 340 QCRAGSFQCDN--GNCTPSASICDGVDDCRDGSDEKHC 375
C +FQC C +CDG DC + DE
Sbjct: 1 HCEKRTFQCGGNEQECISDLLVCDGHKDCHNAHDEDPD 38
Score = 38.7 bits (90), Expect = 1e-04
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 462 NCTKGWERCPGKTNYRCIPKWLFCDGKDDCRDGSDELPQNC 502
+C K +C G CI L CDG DC + DE P C
Sbjct: 1 HCEKRTFQCGGNEQ-ECISDLLVCDGHKDCHNAHDEDPDVC 40
Score = 38.3 bits (89), Expect = 2e-04
Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 426 EFACRN--GHCIPKLWVCDFDNDCGDDSDEPAYMC 458
F C CI L VCD DC + DE +C
Sbjct: 6 TFQCGGNEQECISDLLVCDGHKDCHNAHDEDPDVC 40
Score = 37.9 bits (88), Expect = 3e-04
Identities = 12/37 (32%), Positives = 14/37 (37%), Gaps = 2/37 (5%)
Query: 125 CSSEEFACQNF--KCIRKTYHCDGEDDCGDRSDEFNC 159
C F C +CI CDG DC + DE
Sbjct: 2 CEKRTFQCGGNEQECISDLLVCDGHKDCHNAHDEDPD 38
Score = 37.9 bits (88), Expect = 3e-04
Identities = 12/37 (32%), Positives = 14/37 (37%), Gaps = 2/37 (5%)
Query: 176 CSSEEFACQNF--KCIRKTYHCDGEDDCGDRSDEFNC 210
C F C +CI CDG DC + DE
Sbjct: 2 CEKRTFQCGGNEQECISDLLVCDGHKDCHNAHDEDPD 38
Score = 37.5 bits (87), Expect = 3e-04
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 632 CPEYKFQCA-STHLCVEQSELCDGTDDCGDNSDETSSLC 669
C + FQC + C+ +CDG DC + DE +C
Sbjct: 2 CEKRTFQCGGNEQECISDLLVCDGHKDCHNAHDEDPDVC 40
Score = 37.5 bits (87), Expect = 3e-04
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 909 CPEYKFQCA-STHLCVEQSELCDGTDDCGDNSDETSSLC 946
C + FQC + C+ +CDG DC + DE +C
Sbjct: 2 CEKRTFQCGGNEQECISDLLVCDGHKDCHNAHDEDPDVC 40
Score = 35.6 bits (82), Expect = 0.002
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 868 GTFQC--SSGHCIAAYFRCDGDRDCRDLSDEMNC 899
TFQC + CI+ CDG +DC + DE
Sbjct: 5 RTFQCGGNEQECISDLLVCDGHKDCHNAHDEDPD 38
Score = 34.9 bits (80), Expect = 0.003
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 679 KCIPKWLFCDGKDDCRDGSDELPQNC 704
+CI L CDG DC + DE P C
Sbjct: 15 ECISDLLVCDGHKDCHNAHDEDPDVC 40
Score = 34.5 bits (79), Expect = 0.003
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 1040 CSSSQFRC--NNGKCIDYHLVCNKESDCEDDSDE 1071
C F+C N +CI LVC+ DC + DE
Sbjct: 2 CEKRTFQCGGNEQECISDLLVCDGHKDCHNAHDE 35
Score = 34.1 bits (78), Expect = 0.006
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 834 QCKNGTFQC--SSGHCIAAYFRCDGDRDCRDLSE 865
C+ TFQC + CI+ CDG +DC + +
Sbjct: 1 HCEKRTFQCGGNEQECISDLLVCDGHKDCHNAHD 34
Score = 33.3 bits (76), Expect = 0.011
Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Query: 950 NCTSLHKYQCDN--GRCIASYQLCDGVDNCGDGSDENN 985
+C +QC CI+ +CDG +C + DE+
Sbjct: 1 HCEK-RTFQCGGNEQECISDLLVCDGHKDCHNAHDEDP 37
Score = 27.9 bits (62), Expect = 0.87
Identities = 6/21 (28%), Positives = 9/21 (42%)
Query: 810 ASNWRCDHDEDCTDGSDETEC 830
+ CD +DC + DE
Sbjct: 18 SDLLVCDGHKDCHNAHDEDPD 38
Score = 27.5 bits (61), Expect = 1.1
Identities = 8/35 (22%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 1002 SQYTCSNH--KCIDRAALCNHVDDCGDLSDELGCH 1034
+ C + +CI +C+ DC + DE
Sbjct: 5 RTFQCGGNEQECISDLLVCDGHKDCHNAHDEDPDV 39
Score = 26.8 bits (59), Expect = 2.0
Identities = 6/15 (40%), Positives = 8/15 (53%)
Query: 100 WLCDHDNDCGDGSDE 114
+CD DC + DE
Sbjct: 21 LVCDGHKDCHNAHDE 35
>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor,
different EGF domains {Human (Homo sapiens) [TaxId:
9606]}
Length = 40
Score = 45.5 bits (108), Expect = 4e-07
Identities = 13/37 (35%), Positives = 15/37 (40%)
Query: 1356 VDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLS 1392
+EC CS VC +L Y C C GF L
Sbjct: 2 TNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRR 38
Score = 33.6 bits (77), Expect = 0.008
Identities = 16/56 (28%), Positives = 21/56 (37%), Gaps = 19/56 (33%)
Query: 240 NPCDGDNGGCSHLCLLSPVPGVDRAPDMYADARSPVSYTCACPNQFYLDPRDNKTC 295
N C +NGGCSH+C + Y C CP+ F L + C
Sbjct: 3 NECLDNNGGCSHVCND-----------------LKIGYECLCPDGFQLV--AQRRC 39
Score = 32.0 bits (73), Expect = 0.024
Identities = 11/35 (31%), Positives = 13/35 (37%), Gaps = 1/35 (2%)
Query: 1077 VDECAKVETNQCGHKCVDTLTGYYCECNTGYNDDD 1111
+EC C H C D GY C C G+
Sbjct: 2 TNECL-DNNGGCSHVCNDLKIGYECLCPDGFQLVA 35
>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 43.6 bits (103), Expect = 2e-06
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 1353 CLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLS 1388
+D+DEC C N +G+Y C C G+ L+
Sbjct: 2 AVDMDECKEPDVCKHGQCINTDGSYRCECPFGYILA 37
Score = 29.3 bits (66), Expect = 0.23
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 1076 NVDECAKVETNQCGHKCVDTLTGYYCECNTGYNDD 1110
++DEC +C++T Y CEC GY
Sbjct: 4 DMDECK-EPDVCKHGQCINTDGSYRCECPFGYILA 37
>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL)
receptor, different EGF domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 50
Score = 43.0 bits (101), Expect = 5e-06
Identities = 16/58 (27%), Positives = 23/58 (39%), Gaps = 12/58 (20%)
Query: 240 NPCDGDNGGCSHLCLLSPVPGVDRAPDMYADARSPVSYTCACPNQFYLDPRDNKTCVA 297
NGGC +LCL +P +TCACP+ L D ++C+
Sbjct: 5 ERTTLSNGGCQYLCLPAP-----------QINPHSPKFTCACPDGMLLAR-DMRSCLT 50
Score = 28.4 bits (63), Expect = 0.82
Identities = 6/39 (15%), Positives = 12/39 (30%), Gaps = 6/39 (15%)
Query: 1357 DECATGIHHCSQVC------TNLNGTYACSCNAGFTLSD 1389
+ C +C + + C+C G L+
Sbjct: 5 ERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLAR 43
>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 41.0 bits (96), Expect = 2e-05
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 1355 DVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSD 1389
DV+EC S C N G+Y C C F L+
Sbjct: 2 DVNECLDPTTCISGNCVNTPGSYICDCPPDFELNP 36
Score = 30.2 bits (68), Expect = 0.14
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 1077 VDECAKVETNQCGHKCVDTLTGYYCECNTGYNDDDIGT 1114
V+EC T CV+T Y C+C + +
Sbjct: 3 VNECL-DPTTCISGNCVNTPGSYICDCPPDFELNPTRV 39
Score = 25.2 bits (55), Expect = 7.4
Identities = 15/57 (26%), Positives = 18/57 (31%), Gaps = 18/57 (31%)
Query: 240 NPCDGDNGGCSHLCLLSPVPGVDRAPDMYADARSPVSYTCACPNQFYLDPRDNKTCV 296
N C S C+ +P SY C CP F L+P CV
Sbjct: 4 NECLDPTTCISGNCV-----------------NTPGSYICDCPPDFELNP-TRVGCV 42
>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 40
Score = 39.7 bits (93), Expect = 5e-05
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 1355 DVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVC 1395
D+DEC G CS VC NL GT+ C C L+ + C
Sbjct: 1 DIDECENG-GFCSGVCHNLPGTFECICGPDSALAGQIGTDC 40
Score = 30.9 bits (70), Expect = 0.061
Identities = 7/31 (22%), Positives = 10/31 (32%), Gaps = 2/31 (6%)
Query: 1077 VDECAKVETNQCGHKCVDTLTGYYCECNTGY 1107
+DEC C C + + C C
Sbjct: 2 IDECE--NGGFCSGVCHNLPGTFECICGPDS 30
>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor,
different EGF domains {Human (Homo sapiens) [TaxId:
9606]}
Length = 41
Score = 39.7 bits (93), Expect = 6e-05
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 1356 VDECATGIHHCSQVCTNLNGTYACSCNAGFTLSD 1389
+DEC CSQ+C NL G Y C C GF L
Sbjct: 1 IDECQDP-DTCSQLCVNLEGGYKCQCEEGFQLDP 33
Score = 33.6 bits (77), Expect = 0.008
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 1077 VDECAKVETNQCGHKCVDTLTGYYCECNTGY 1107
+DEC + + C CV+ GY C+C G+
Sbjct: 1 IDECQ--DPDTCSQLCVNLEGGYKCQCEEGF 29
Score = 28.9 bits (65), Expect = 0.35
Identities = 15/53 (28%), Positives = 16/53 (30%), Gaps = 18/53 (33%)
Query: 245 DNGGCSHLCLLSPVPGVDRAPDMYADARSPVSYTCACPNQFYLDPRDNKTCVA 297
D CS LC+ Y C C F LDP K C A
Sbjct: 6 DPDTCSQLCV-----------------NLEGGYKCQCEEGFQLDP-HTKACKA 40
>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 42
Score = 39.4 bits (92), Expect = 7e-05
Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 1355 DVDECATGIHHCSQ-VCTNLNGTYACSCNAGFTLSD 1389
D+DEC C VC N G+Y C C G LS
Sbjct: 1 DIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSP 36
Score = 32.5 bits (74), Expect = 0.019
Identities = 11/38 (28%), Positives = 16/38 (42%)
Query: 1077 VDECAKVETNQCGHKCVDTLTGYYCECNTGYNDDDIGT 1114
+DEC + G C +T Y CEC G+ +
Sbjct: 2 IDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNIS 39
>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 39.0 bits (91), Expect = 1e-04
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 1355 DVDECATGIHHCS-QVCTNLNGTYACSCNAGFTLSD 1389
D+DEC C C N G++ C C G+ L++
Sbjct: 2 DIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNE 37
Score = 34.8 bits (80), Expect = 0.003
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 1077 VDECAKVETNQCGHKCVDTLTGYYCECNTGYNDDDIGT 1114
+DEC ++ G KC++T + C C TGY ++
Sbjct: 3 IDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTR 40
>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens)
[TaxId: 9606]}
Length = 53
Score = 38.8 bits (90), Expect = 1e-04
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 8/43 (18%)
Query: 1355 DVDECATGIH--------HCSQVCTNLNGTYACSCNAGFTLSD 1389
D+DECA+ C +C N G Y CSC G+ L +
Sbjct: 3 DLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQE 45
Score = 30.3 bits (68), Expect = 0.15
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 1076 NVDECAKVETNQCGHKCVDTLTGYYCECNTGY 1107
+ QC H C + + GY+C C GY
Sbjct: 10 RSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGY 41
>d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 38.3 bits (89), Expect = 3e-04
Identities = 11/59 (18%), Positives = 15/59 (25%), Gaps = 17/59 (28%)
Query: 242 CDGDNGGCSHLCLLSPVPGVDRAPDMYADARSPVSYTCACPNQFYLDPRDNKTCVANCT 300
C +NGGC C +C C + L D +C
Sbjct: 2 CVNENGGCEQYCSDHTGT----------------KRSCRCHEGYSLLA-DGVSCTPTVE 43
Score = 30.6 bits (69), Expect = 0.11
Identities = 8/32 (25%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 1359 CATGIHHCSQVCTNL-NGTYACSCNAGFTLSD 1389
C C Q C++ +C C+ G++L
Sbjct: 2 CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLA 33
Score = 26.7 bits (59), Expect = 2.8
Identities = 9/39 (23%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Query: 1324 HHCMNITGGSGYLCTCYQGFIIDKNNAKKCLDVDECATG 1362
+C + TG C C++G+ + + C E G
Sbjct: 11 QYCSDHTGTK-RSCRCHEGYSLLADG-VSCTPTVEYPCG 47
>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated
serine protease 2, MASP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 45
Score = 37.9 bits (88), Expect = 3e-04
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Query: 1356 VDECATG---IHHCSQVCTNLNGTYACSCNAGFTLSD 1389
+DEC C C N G + CSC AG+ L
Sbjct: 1 IDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHR 37
Score = 31.8 bits (72), Expect = 0.043
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Query: 1077 VDECAKVETNQ--CGHKCVDTLTGYYCECNTGY 1107
+DEC C H C + L G+YC C GY
Sbjct: 1 IDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGY 33
Score = 27.1 bits (60), Expect = 1.8
Identities = 9/54 (16%), Positives = 15/54 (27%), Gaps = 18/54 (33%)
Query: 244 GDNGGCSHLCLLSPVPGVDRAPDMYADARSPVSYTCACPNQFYLDPRDNKTCVA 297
G+ C H C + C+C + L + +TC
Sbjct: 9 GEAPTCDHHCH-----------------NHLGGFYCSCRAGYVLHR-NKRTCSE 44
>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated
serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 45
Score = 37.6 bits (87), Expect = 4e-04
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Query: 1356 VDECAT---GIHHCSQVCTNLNGTYACSCNAGFTLSD 1389
VDEC T C C N G Y CSC G+ L
Sbjct: 1 VDECRTSLGDSVPCDHYCHNYLGGYYCSCRVGYILHQ 37
Score = 30.3 bits (68), Expect = 0.12
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Query: 1077 VDECAKV--ETNQCGHKCVDTLTGYYCECNTGY 1107
VDEC ++ C H C + L GYYC C GY
Sbjct: 1 VDECRTSLGDSVPCDHYCHNYLGGYYCSCRVGY 33
>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 44
Score = 37.1 bits (86), Expect = 4e-04
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 1355 DVDECATGIHHCSQ-VCTNLNGTYACSCNAGFTLS 1388
D+DEC C + C N G + C C+ G+
Sbjct: 2 DIDECRISPDLCGRGQCVNTPGDFECKCDEGYESG 36
Score = 31.3 bits (71), Expect = 0.054
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 1077 VDECAKVETNQCGHKCVDTLTGYYCECNTGYNDD 1110
+DEC +CV+T + C+C+ GY
Sbjct: 3 IDECRISPDLCGRGQCVNTPGDFECKCDEGYESG 36
Score = 25.6 bits (56), Expect = 6.8
Identities = 5/23 (21%), Positives = 8/23 (34%)
Query: 274 PVSYTCACPNQFYLDPRDNKTCV 296
P + C C + K C+
Sbjct: 22 PGDFECKCDEGYESGFMMMKNCM 44
>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId:
9606]}
Length = 57
Score = 37.1 bits (86), Expect = 7e-04
Identities = 11/58 (18%), Positives = 16/58 (27%), Gaps = 17/58 (29%)
Query: 242 CDGDNGGCSHLCLLSPVPGVDRAPDMYADARSPVSYTCACPNQFYLDPRDNKTCVANC 299
C+ NG C C S C+C + L + K+C
Sbjct: 3 CNIKNGRCEQFCKNSA----------------DNKVVCSCTEGYRLAE-NQKSCEPAV 43
Score = 30.9 bits (70), Expect = 0.096
Identities = 11/47 (23%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
Query: 1324 HHCMNITGGSGYLCTCYQGFIIDKNNAKKCLDVDECATGIHHCSQVC 1370
C N + + +C+C +G+ + +N K C G SQ
Sbjct: 12 QFCKN-SADNKVVCSCTEGYRLAENQ-KSCEPAVPFPCGRVSVSQTS 56
Score = 30.2 bits (68), Expect = 0.23
Identities = 10/32 (31%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 1359 CATGIHHCSQVCTNL-NGTYACSCNAGFTLSD 1389
C C Q C N + CSC G+ L++
Sbjct: 3 CNIKNGRCEQFCKNSADNKVVCSCTEGYRLAE 34
>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human
(Homo sapiens) [TaxId: 9606]}
Length = 51
Score = 35.5 bits (82), Expect = 0.002
Identities = 12/58 (20%), Positives = 16/58 (27%), Gaps = 18/58 (31%)
Query: 242 CDGDNGGCSHLCLLSPVPGVDRAPDMYADARSPVSYTCACPNQFYLDPRDNKTCVANC 299
C DNG C C S C+C + L + K C+
Sbjct: 3 CSLDNGDCDQFCHE-----------------EQNSVVCSCARGYTLAD-NGKACIPTG 42
Score = 35.2 bits (81), Expect = 0.003
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 1359 CATGIHHCSQVCTNLNGTYACSCNAGFTLSD 1389
C+ C Q C + CSC G+TL+D
Sbjct: 3 CSLDNGDCDQFCHEEQNSVVCSCARGYTLAD 33
Score = 27.8 bits (62), Expect = 1.3
Identities = 6/21 (28%), Positives = 7/21 (33%)
Query: 1088 CGHKCVDTLTGYYCECNTGYN 1108
C C + C C GY
Sbjct: 10 CDQFCHEEQNSVVCSCARGYT 30
Score = 25.9 bits (57), Expect = 6.2
Identities = 8/39 (20%), Positives = 14/39 (35%), Gaps = 3/39 (7%)
Query: 1324 HHCMNITGGSGYLCTCYQGFIIDKNNAKKCLDVDECATG 1362
C +C+C +G+ + N K C+ G
Sbjct: 12 QFCHEEQNS--VVCSCARGYTLADNG-KACIPTGPYPCG 47
>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo
sapiens) [TaxId: 9606]}
Length = 42
Score = 35.2 bits (81), Expect = 0.002
Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 4/44 (9%)
Query: 1357 DECATGIHH-CSQVCTNLNGTYACSCNAGFTL-SDGLSGVCKAN 1398
+EC + CS C N G Y CSC + L D + C N
Sbjct: 1 NECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKN--CGVN 42
Score = 34.1 bits (78), Expect = 0.006
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 1078 DECAKVETNQCGHKCVDTLTGYYCECNTGY 1107
+EC C H C + + GY+C C Y
Sbjct: 1 NECTDFVDVPCSHFCNNFIGGYFCSCPPEY 30
Score = 29.4 bits (66), Expect = 0.25
Identities = 14/57 (24%), Positives = 19/57 (33%), Gaps = 18/57 (31%)
Query: 242 CDGDNGGCSHLCLLSPVPGVDRAPDMYADARSPVSYTCACPNQFYLDPRDNKTCVAN 298
D + CSH C Y C+CP +++L D K C N
Sbjct: 4 TDFVDVPCSHFCN-----------------NFIGGYFCSCPPEYFLHD-DMKNCGVN 42
>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus)
[TaxId: 9913]}
Length = 51
Score = 35.2 bits (81), Expect = 0.003
Identities = 15/65 (23%), Positives = 22/65 (33%), Gaps = 20/65 (30%)
Query: 242 CDGDNGGCSHLCLLSPVPGVDRAPDMYADARSPVSYTCACPNQFYLDPRDNKTCVA--NC 299
C DNGGC C C+C + + L D+K+CV+
Sbjct: 1 CSLDNGGCDQFCRE-----------------ERSEVRCSCAHGYVLGD-DSKSCVSTERF 42
Query: 300 TQGQH 304
G+
Sbjct: 43 PCGKF 47
Score = 34.8 bits (80), Expect = 0.003
Identities = 10/31 (32%), Positives = 12/31 (38%)
Query: 1359 CATGIHHCSQVCTNLNGTYACSCNAGFTLSD 1389
C+ C Q C CSC G+ L D
Sbjct: 1 CSLDNGGCDQFCREERSEVRCSCAHGYVLGD 31
Score = 29.4 bits (66), Expect = 0.31
Identities = 7/41 (17%), Positives = 15/41 (36%), Gaps = 3/41 (7%)
Query: 1324 HHCMNITGGSGYLCTCYQGFIIDKNNAKKCLDVDECATGIH 1364
C C+C G+++ ++ K C+ + G
Sbjct: 10 QFCREERSE--VRCSCAHGYVLGDDS-KSCVSTERFPCGKF 47
Score = 27.5 bits (61), Expect = 1.8
Identities = 6/26 (23%), Positives = 10/26 (38%)
Query: 1083 VETNQCGHKCVDTLTGYYCECNTGYN 1108
++ C C + + C C GY
Sbjct: 3 LDNGGCDQFCREERSEVRCSCAHGYV 28
>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 50
Score = 34.8 bits (80), Expect = 0.004
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 1359 CATGIHHCSQVCTNLNGTYACSCNAGFTLSD 1389
C+ C+ C G CSC G+ L D
Sbjct: 2 CSLDNGGCTHYCLEEVGWRRCSCAPGYKLGD 32
Score = 34.0 bits (78), Expect = 0.006
Identities = 14/58 (24%), Positives = 17/58 (29%), Gaps = 18/58 (31%)
Query: 242 CDGDNGGCSHLCLLSPVPGVDRAPDMYADARSPVSYTCACPNQFYLDPRDNKTCVANC 299
C DNGGC+H CL C+C + L D C
Sbjct: 2 CSLDNGGCTHYCLE-----------------EVGWRRCSCAPGYKLGD-DLLQCHPAV 41
Score = 27.1 bits (60), Expect = 1.9
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 1088 CGHKCVDTLTGYYCECNTGY 1107
C H C++ + C C GY
Sbjct: 9 CTHYCLEEVGWRRCSCAPGY 28
>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein
1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 42
Score = 33.2 bits (76), Expect = 0.011
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 1355 DVDECATGIHHCSQ--VCTNLNGTYACSCNAGFT 1386
DVDEC+ G + C C N G++ C C G+T
Sbjct: 2 DVDECSLGANPCEHAGKCINTLGSFECQCLQGYT 35
Score = 27.4 bits (61), Expect = 1.3
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Query: 1077 VDECAKVETNQCGH--KCVDTLTGYYCECNTGY 1107
VDEC+ N C H KC++TL + C+C GY
Sbjct: 3 VDECSL-GANPCEHAGKCINTLGSFECQCLQGY 34
>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 40
Score = 32.1 bits (73), Expect = 0.029
Identities = 10/30 (33%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Query: 1359 CATGIHHCSQ--VCTNLNGTYACSCNAGFT 1386
CA H CS C + + C C A +T
Sbjct: 2 CANNRHQCSVHAECRDYATGFCCRCVANYT 31
>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 29.2 bits (66), Expect = 0.29
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 1354 LDVDECATGIHHCSQVCTNLNGTYACSCNAGFT 1386
+D D+C + C + +Y C C GF
Sbjct: 1 VDGDQCESNPCLNGGSCKDDINSYECWCPFGFE 33
Score = 25.8 bits (57), Expect = 4.1
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 5/34 (14%)
Query: 1076 NVDECAKVETNQC--GHKCVDTLTGYYCECNTGY 1107
+ D+C +N C G C D + Y C C G+
Sbjct: 2 DGDQCE---SNPCLNGGSCKDDINSYECWCPFGF 32
>d1xdia1 c.3.1.5 (A:2-161,A:276-348) Dihydrolipoamide dehydrogenase
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 233
Score = 32.4 bits (72), Expect = 0.35
Identities = 12/167 (7%), Positives = 29/167 (17%), Gaps = 7/167 (4%)
Query: 714 QCKNNRCIPKRWMCDFENDCGDQSDEAEDLCAGAYRQCSESEFQCKNGKCIPAQWRCDHD 773
+ C+P + + + S Q A +
Sbjct: 41 AAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAKISLPQIHARVKTLAAAQSADI 100
Query: 774 EDCTDGSDEMECGGFQCKCVTMTRIVQMEVMKWNAAASNWRCDHDEDCTDGSDETECGGF 833
G + + + + A D + G
Sbjct: 101 TAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAA-------DGSTSEHEADVVLVATGA 153
Query: 834 QCKNGTFQCSSGHCIAAYFRCDGDRDCRDLSELNGTFQCSSGHCIAA 880
+ R + ++ + + AA
Sbjct: 154 SPRILPSGSVPNTSGLGLERVGIQLGRGNYLTVDRVSRTLATGIYAA 200
Score = 28.1 bits (61), Expect = 6.8
Identities = 12/128 (9%), Positives = 22/128 (17%), Gaps = 1/128 (0%)
Query: 512 QCKNNRCIPKRWMCDFENDCGDQSDEAEDLCAGAYRQCSESEFQCKNGKCIPAQWRCDHD 571
+ C+P + + + S Q A +
Sbjct: 41 AAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAKISLPQIHARVKTLAAAQSADI 100
Query: 572 EDCTDGSDEMECGGFQCKNGTFQCSSGHCIAAYFRCDGDRDCRDLSDEMNCPPRYPGGRF 631
G + + H I A DG + + P
Sbjct: 101 TAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAA-DGSTSEHEADVVLVATGASPRILP 159
Query: 632 CPEYKFQC 639
Sbjct: 160 SGSVPNTS 167
Score = 28.1 bits (61), Expect = 7.7
Identities = 11/142 (7%), Positives = 24/142 (16%)
Query: 555 QCKNGKCIPAQWRCDHDEDCTDGSDEMECGGFQCKNGTFQCSSGHCIAAYFRCDGDRDCR 614
C+P++ T+ G +
Sbjct: 41 AAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAKISLPQIHARVKTLAAAQSADI 100
Query: 615 DLSDEMNCPPRYPGGRFCPEYKFQCASTHLCVEQSELCDGTDDCGDNSDETSSLCSNMNC 674
G + A + ++ + T + +
Sbjct: 101 TAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASPRILPS 160
Query: 675 TSLHKCIPKWLFCDGKDDCRDG 696
S+ L G R
Sbjct: 161 GSVPNTSGLGLERVGIQLGRGN 182
Score = 28.1 bits (61), Expect = 7.9
Identities = 14/176 (7%), Positives = 34/176 (19%), Gaps = 16/176 (9%)
Query: 428 ACRNGHCIPKLWVCDFDNDCGDDSDEPAYMCRQRNCTKGWERCPGKTNYRCIPKWLFCDG 487
A C+P + P + K + I +
Sbjct: 41 AAVLDDCVPSKTFIASTGLRTELRRAPHLGFH-------IDFDDAKISLPQIHARVKTLA 93
Query: 488 KDDCRDGSDELPQNCPKCHETTDFQCKNNRCIPKRWMCDFENDCGDQSDEAEDLCAGAYR 547
D + +L + + + + + D EA+ +
Sbjct: 94 AAQSADITAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVVL----- 148
Query: 548 QCSESEFQCKNGKCIPAQWRCDHDEDCTDGSDEMECGGFQCKNGTFQCSSGHCIAA 603
++ G + + + + AA
Sbjct: 149 ----VATGASPRILPSGSVPNTSGLGLERVGIQLGRGNYLTVDRVSRTLATGIYAA 200
>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma
cruzi [TaxId: 5693]}
Length = 412
Score = 32.5 bits (72), Expect = 0.38
Identities = 20/265 (7%), Positives = 43/265 (16%), Gaps = 11/265 (4%)
Query: 367 RDGSDEKHCDLPCPDLEFKCASNGRCILNSWKCDGEPDCKDGSDEDPAMCHNRPCDKDTE 426
E+ D C+ IL + + + + C
Sbjct: 88 SFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGI 147
Query: 427 FACRNGHCIPKLWVCDFDNDCGDDSDEPAYMCRQRNCTKGWERCPGKTNYRCIPKWLFCD 486
W D D D+ + K +
Sbjct: 148 GMHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELR 207
Query: 487 GKDDCRDGSDELPQNCPKCHETTDFQCKNNRCIPKRWMCDFENDCGDQSDEAEDLCAGAY 546
+ + + T +P+ + +
Sbjct: 208 LPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLV-----------VPG 256
Query: 547 RQCSESEFQCKNGKCIPAQWRCDHDEDCTDGSDEMECGGFQCKNGTFQCSSGHCIAAYFR 606
+ + +G G + I A
Sbjct: 257 WRLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIE 316
Query: 607 CDGDRDCRDLSDEMNCPPRYPGGRF 631
+ + + P P G
Sbjct: 317 ESAMYLYNHIGECIGLAPTMPRGAM 341
>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId:
9823]}
Length = 37
Score = 28.5 bits (64), Expect = 0.44
Identities = 9/32 (28%), Positives = 13/32 (40%)
Query: 1355 DVDECATGIHHCSQVCTNLNGTYACSCNAGFT 1386
D D+CA+ C + +Y C C F
Sbjct: 1 DGDQCASSPCQNGGSCKDQLQSYICFCLPAFE 32
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus
denitrificans [TaxId: 266]}
Length = 368
Score = 31.5 bits (70), Expect = 0.74
Identities = 18/243 (7%), Positives = 42/243 (17%), Gaps = 19/243 (7%)
Query: 1236 HEDDIAWPNALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVPHVFA------ 1289
+ + + L + A + + G + H+
Sbjct: 119 RFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATH 178
Query: 1290 LTLFED--HIYWTDWNTKSINRADKFNAREIQAGILHHCMNITGGSGYLCTCYQGFIIDK 1347
+ Q G D
Sbjct: 179 YLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDI 238
Query: 1348 NNAKKCLDVDECATGIHHCSQVCTNLNGTYACSCNAGFTLSDGLSGVCKANDNKLTIVYS 1407
A A + S + + G+ +
Sbjct: 239 PAA----GATMKAAIDGNESGR---KADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLA 291
Query: 1408 NGPEIRAYETHKRRFRDVISDERRIEALDIDPVDE-IIYWVDSYDRNIRRSFMLEAQKGQ 1466
+ + IS+ +A+ Y + + + +A Q
Sbjct: 292 AAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLD---IYDAASDQ 348
Query: 1467 VQA 1469
Q+
Sbjct: 349 DQS 351
>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein
1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 39
Score = 26.6 bits (59), Expect = 2.7
Identities = 8/31 (25%), Positives = 13/31 (41%)
Query: 1356 VDECATGIHHCSQVCTNLNGTYACSCNAGFT 1386
V+EC + C + G + C C G+
Sbjct: 1 VNECVSNPCQNDATCLDQIGEFQCICMPGYE 31
Score = 25.4 bits (56), Expect = 6.2
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 5/33 (15%)
Query: 1077 VDECAKVETNQC--GHKCVDTLTGYYCECNTGY 1107
V+EC +N C C+D + + C C GY
Sbjct: 1 VNECV---SNPCQNDATCLDQIGEFQCICMPGY 30
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 472
Score = 30.0 bits (66), Expect = 2.8
Identities = 27/248 (10%), Positives = 61/248 (24%), Gaps = 12/248 (4%)
Query: 587 QCKNGTFQCSSGHCIAAYFRCDGDRDCRDLSDEMNCPPRYPGGRFCPEYKFQCASTHLCV 646
IA Y R+ + G + + +
Sbjct: 108 PTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNID 167
Query: 647 EQSELCDGTDDCGDNSDETSSLCSNMNCTSLHKCIPKWL-FCDGKDDCRDGSDELPQNCP 705
+ D + L ++ + L + R+ ++ L ++
Sbjct: 168 SLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVK 227
Query: 706 KCHETTDFQCKNNRCIPKRWMCDFENDCGDQSDEAED-----------LCAGAYRQCSES 754
+ E+ + +R + M D +N +S +A + AG S
Sbjct: 228 RMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVL 287
Query: 755 EFQCKNGKCIPAQWRCDHDEDCTDGSDEMECGGFQCKCVTMTRIVQMEVMKWNAAASNWR 814
F P + +E ++ + +V E ++ A
Sbjct: 288 SFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLE 347
Query: 815 CDHDEDCT 822
+D
Sbjct: 348 RVCKKDVE 355
>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit
(Oryctolagus cuniculus) [TaxId: 9986]}
Length = 340
Score = 29.3 bits (65), Expect = 3.9
Identities = 11/102 (10%), Positives = 29/102 (28%), Gaps = 10/102 (9%)
Query: 1194 IQDPRGITLHPGIGYV-----YFSSWNLQAYIGKIGMDGSNFTRILTHE-----DDIAWP 1243
+ I + YF L+++ +G+ S T ++ + +
Sbjct: 149 LPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVVAEGFDFA 208
Query: 1244 NALTLDYFTERLYWADAHLDYIASVDLDGKHKHIVISGQKVP 1285
N + + + +Y A+ I + +
Sbjct: 209 NGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFD 250
>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 39
Score = 26.0 bits (57), Expect = 4.6
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 1357 DECATGIHHCSQVCTNLNGTYACSCNAGF 1385
DEC+ G + C N+ G + C+C GF
Sbjct: 2 DECSVGNPCGNGTCKNVIGGFECTCEEGF 30
>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo
sapiens) [TaxId: 9606]}
Length = 39
Score = 25.4 bits (56), Expect = 5.9
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 1357 DECATGIHHCSQVCTNLNGTYACSCNAGFT 1386
D+C T C + G Y C+C GF
Sbjct: 1 DQCETSPCQNQGKCKDGLGEYTCTCLEGFE 30
>d1rm6a2 d.133.1.1 (A:134-769) 4-hydroxybenzoyl-CoA reductase alpha
subunit HrcA, C-terminal domain {Thauera aromatica
[TaxId: 59405]}
Length = 636
Score = 28.9 bits (63), Expect = 6.3
Identities = 28/360 (7%), Positives = 58/360 (16%), Gaps = 22/360 (6%)
Query: 563 PAQWRCDHDEDCTDGSDEMECGGFQCKNGTFQCSSGHCIAAYFRCDGDRDCRDLSDEMNC 622
+ +E + K G + + +
Sbjct: 135 TVRLLQTREETFIAHRGRPWT---EVKMKIGLKKDGKIA--ALALEATQAGGAYAGYGII 189
Query: 623 PPRYPGGRFCPEYKFQCASTHLCVEQSELCDGTDDCGDNSDETSSLCSNMNCTSLHKCIP 682
Y G Y T CG + L +
Sbjct: 190 TILYTGALMHGLYHIPAIKHDAWRV----YTNTPPCGAMRGHGTVDTRAAFEALLTEMGE 245
Query: 683 KWLFCDGKDDCRDGSDELPQNCPKCHETTDFQCKNNRCIPKRWMCDFENDCGDQSDEAED 742
+ K + ++P + K E
Sbjct: 246 ELGIDSLKIRQINMLPQIPYVTMYAQRVMSYGVPECLEKVKAASGWEERKGKLPKGRGLG 305
Query: 743 LCAGAYRQCSESEFQCKNGKCIPAQWRCDHDEDCTDGSDEMECGGFQCKCVTMTRIVQME 802
+ + + + + + DG + G + T Q+
Sbjct: 306 IALSHFVSGTSTPKHWTGE-----PHATVNLKLDFDGGITLLTGAADIGQGSNTMASQV- 359
Query: 803 VMKWNAAASNWRCDHDEDCTDGSDETECGGFQCKNGTFQCSSGHCIAAYFRCDGDRDCRD 862
AA +D + + +
Sbjct: 360 ------AAEVLGVRLSRIRVISADSALTPKDNGSYSSRVTFMVGNASISAAEELKGVLVK 413
Query: 863 LSELNGTFQCSSGHCIAAYFRCDGDRDCRDLSDEMNCPPRYPGGRFCPEYKFQCASTHLC 922
+ + I F G + LS + T
Sbjct: 414 AAAKKLDAREEDIEVIDEMFMVSGSQ-DPGLSFQEVVKAAMVDSGTITVKGTYTCPTEFQ 472
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus
[TaxId: 1280]}
Length = 319
Score = 28.1 bits (61), Expect = 8.3
Identities = 23/233 (9%), Positives = 51/233 (21%), Gaps = 31/233 (13%)
Query: 6 KENRFYFADVAAKTIYRSRVGSTEKERAYIGKIGMDGSNFTRILTHEDDIAWPNALTLDY 65
++ + + DV I++ I + R A P A+ +
Sbjct: 49 RQGQLFLLDVFEGNIFK---------------INPETKEIKRPFVSHK--ANPAAIKIHK 91
Query: 66 FTERLYWADAH----LDYIASVDLDGKHKHIVISGQKGWLCDHDNDCGDGSDEGKECHDK 121
RL+ I + +G + +I C D
Sbjct: 92 -DGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRG 150
Query: 122 YRTCSSEEFACQNFKC--IRKTYHCDGEDDCGDRSDEFNCRDGSDEGKECHDKYRTCSSE 179
Y T + + + S + ++ +
Sbjct: 151 YSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALED-- 208
Query: 180 EFACQNFKCIRKTYHCDGEDDCGDRSDEFNCSRDYRVLRNTTHRPYDIHVYHP 232
+ I+ G + C L + + V++
Sbjct: 209 -----DGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK 256
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.137 0.468
Gapped
Lambda K H
0.267 0.0376 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 6,629,108
Number of extensions: 365695
Number of successful extensions: 2339
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2004
Number of HSP's successfully gapped: 688
Length of query: 1576
Length of database: 2,407,596
Length adjustment: 97
Effective length of query: 1479
Effective length of database: 1,075,786
Effective search space: 1591087494
Effective search space used: 1591087494
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.5 bits)