Query psy9483
Match_columns 186
No_of_seqs 108 out of 1051
Neff 7.0
Searched_HMMs 29240
Date Fri Aug 16 20:34:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9483.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9483hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rpz_A ADP/ATP-dependent NAD(P 100.0 5.1E-39 1.7E-43 271.6 13.1 168 2-185 50-226 (279)
2 3rss_A Putative uncharacterize 100.0 1.9E-37 6.6E-42 280.2 15.1 176 2-185 264-450 (502)
3 3k5w_A Carbohydrate kinase; 11 100.0 4.6E-36 1.6E-40 269.5 12.0 156 2-185 254-422 (475)
4 2r3b_A YJEF-related protein; p 100.0 8.3E-35 2.8E-39 249.0 11.9 173 3-185 65-242 (310)
5 3bgk_A SMU.573, putative uncha 100.0 6E-34 2.1E-38 243.7 10.2 170 3-185 79-258 (311)
6 3hpd_A Hydroxyethylthiazole ki 100.0 1.1E-28 3.6E-33 206.9 8.6 161 10-185 15-202 (265)
7 3dzv_A 4-methyl-5-(beta-hydrox 99.9 2E-27 6.8E-32 200.1 11.3 135 45-185 49-210 (273)
8 1v8a_A Hydroxyethylthiazole ki 99.9 7.5E-27 2.6E-31 195.4 8.7 134 46-185 48-202 (265)
9 3nl6_A Thiamine biosynthetic b 99.9 3.6E-26 1.2E-30 208.0 10.7 165 6-185 260-473 (540)
10 1ekq_A Hydroxyethylthiazole ki 99.9 2.7E-24 9.1E-29 180.2 10.4 168 4-185 11-205 (272)
11 2i5b_A Phosphomethylpyrimidine 99.7 4.6E-16 1.6E-20 128.5 10.9 167 5-185 26-223 (271)
12 3rm5_A Hydroxymethylpyrimidine 99.6 5E-16 1.7E-20 141.5 9.0 126 54-185 91-249 (550)
13 1ub0_A THID, phosphomethylpyri 99.5 8.4E-14 2.9E-18 113.9 7.1 160 9-185 32-217 (258)
14 1jxh_A Phosphomethylpyrimidine 99.4 2E-13 6.8E-18 114.1 6.9 160 8-185 55-242 (288)
15 3h74_A Pyridoxal kinase; PSI-I 99.3 7.7E-12 2.6E-16 104.8 8.1 165 8-185 33-222 (282)
16 3pzs_A PM kinase, pyridoxamine 99.2 8.3E-11 2.9E-15 98.4 9.7 130 53-185 76-233 (289)
17 3mbh_A Putative phosphomethylp 99.2 6.3E-11 2.1E-15 99.6 8.5 126 54-185 77-232 (291)
18 2ddm_A Pyridoxine kinase; pyri 99.1 3.3E-10 1.1E-14 93.8 11.6 129 51-185 85-240 (283)
19 3zs7_A Pyridoxal kinase; trans 99.0 1.3E-09 4.5E-14 92.0 9.8 129 53-185 75-236 (300)
20 1rkd_A Ribokinase; carbohydrat 98.5 9.2E-07 3.1E-11 73.5 11.3 122 50-184 130-261 (309)
21 3ry7_A Ribokinase; transferase 98.5 1.7E-06 5.8E-11 71.6 12.2 124 48-184 127-260 (304)
22 2qhp_A Fructokinase; NP_810670 98.5 4.9E-07 1.7E-11 74.7 8.5 133 48-184 108-253 (296)
23 3ktn_A Carbohydrate kinase, PF 98.4 6.6E-07 2.2E-11 75.7 8.5 134 49-184 124-286 (346)
24 2yxt_A Pyridoxal kinase; beta 98.4 2.6E-06 8.8E-11 71.3 11.8 130 52-185 74-242 (312)
25 4e69_A 2-dehydro-3-deoxyglucon 98.4 3.1E-06 1.1E-10 71.4 12.2 131 50-184 141-285 (328)
26 2jg5_A Fructose 1-phosphate ki 98.4 1.8E-06 6.2E-11 71.5 10.4 123 52-184 123-255 (306)
27 4du5_A PFKB; structural genomi 98.3 4.9E-06 1.7E-10 70.3 11.3 131 51-184 149-291 (336)
28 2fv7_A Ribokinase; structural 98.3 2E-06 6.7E-11 72.5 8.8 122 51-184 151-284 (331)
29 3lhx_A Ketodeoxygluconokinase; 98.3 6.5E-06 2.2E-10 68.8 10.6 136 45-184 120-272 (319)
30 3iq0_A Putative ribokinase II; 98.2 1.2E-05 4.1E-10 67.6 10.8 131 51-184 127-266 (330)
31 3ie7_A LIN2199 protein; phosph 98.2 1.1E-05 3.6E-10 67.5 9.9 126 48-184 127-259 (320)
32 2rbc_A Sugar kinase, AGR_C_456 98.2 1.5E-05 5.1E-10 67.7 11.0 120 51-184 154-282 (343)
33 2afb_A 2-keto-3-deoxygluconate 98.1 6.6E-06 2.3E-10 69.7 7.8 132 51-184 135-298 (351)
34 4e84_A D-beta-D-heptose 7-phos 98.1 6.8E-05 2.3E-09 63.9 13.7 125 46-184 178-312 (352)
35 3umo_A 6-phosphofructokinase i 98.1 3.3E-05 1.1E-09 64.0 11.2 124 53-184 129-262 (309)
36 2f02_A Tagatose-6-phosphate ki 98.0 1.8E-05 6.1E-10 66.3 9.0 126 51-184 126-263 (323)
37 4e3a_A Sugar kinase protein; s 98.0 1.4E-05 4.7E-10 68.2 8.2 131 51-184 168-306 (352)
38 3ljs_A Fructokinase; fructokia 98.0 8.8E-06 3E-10 68.5 6.6 131 51-184 126-268 (338)
39 3cqd_A 6-phosphofructokinase i 98.0 4.9E-05 1.7E-09 62.9 11.1 123 51-184 128-262 (309)
40 2nwh_A AGR_C_3442P, carbohydra 98.0 4.2E-05 1.5E-09 63.8 10.7 124 50-184 130-261 (317)
41 2abq_A Fructose 1-phosphate ki 98.0 4.4E-05 1.5E-09 63.3 10.4 123 52-184 123-255 (306)
42 3kzh_A Probable sugar kinase; 98.0 7.6E-05 2.6E-09 62.6 11.6 125 47-184 129-263 (328)
43 1vm7_A Ribokinase; TM0960, str 98.0 9.5E-05 3.2E-09 61.7 12.0 119 50-184 136-264 (311)
44 3kd6_A Carbohydrate kinase, PF 97.9 2.5E-05 8.7E-10 65.2 8.1 124 50-184 115-245 (313)
45 1tyy_A Putative sugar kinase; 97.9 5.6E-06 1.9E-10 70.1 3.8 131 51-184 138-278 (339)
46 2jg1_A Tagatose-6-phosphate ki 97.9 7.3E-05 2.5E-09 62.9 10.6 127 50-184 143-280 (330)
47 3hj6_A Fructokinase, FRK; fruc 97.9 1.9E-05 6.6E-10 66.2 6.2 131 50-184 140-281 (327)
48 2qcv_A Putative 5-dehydro-2-de 97.8 5.9E-05 2E-09 63.1 8.6 131 51-184 135-279 (332)
49 3pl2_A Sugar kinase, ribokinas 97.8 0.00018 6E-09 59.8 11.3 129 51-184 132-271 (319)
50 3ikh_A Carbohydrate kinase; tr 97.7 0.00033 1.1E-08 58.0 10.7 109 50-182 127-238 (299)
51 2ajr_A Sugar kinase, PFKB fami 97.6 0.00015 5.1E-09 60.9 8.2 127 50-184 142-279 (331)
52 3h49_A Ribokinase; transferase 97.6 0.00063 2.2E-08 56.8 11.3 130 51-184 132-268 (325)
53 2c4e_A Sugar kinase MJ0406; tr 97.6 4.7E-05 1.6E-09 63.0 4.1 120 53-184 129-253 (302)
54 3vas_A Putative adenosine kina 97.6 0.00019 6.5E-09 61.5 8.0 131 50-184 174-326 (370)
55 1v1a_A 2-keto-3-deoxygluconate 97.6 0.00037 1.3E-08 57.6 9.5 128 51-184 122-257 (309)
56 2pkf_A Adenosine kinase; trans 97.5 0.00051 1.7E-08 57.7 9.2 122 52-184 146-273 (334)
57 1bx4_A Protein (adenosine kina 97.5 0.00023 7.9E-09 59.8 7.1 131 49-184 156-306 (345)
58 3go6_A Ribokinase RBSK; phosph 97.4 0.00046 1.6E-08 57.6 8.4 114 49-184 138-254 (310)
59 2abs_A Adenosine kinase, AK; r 97.3 0.00074 2.5E-08 57.8 8.3 132 48-184 174-344 (383)
60 1vk4_A PFKB carbohydrate kinas 97.3 0.00049 1.7E-08 56.9 6.8 123 53-184 118-252 (298)
61 3otx_A Adenosine kinase, putat 97.3 0.00097 3.3E-08 56.1 8.6 130 50-184 158-307 (347)
62 2dcn_A Hypothetical fructokina 97.2 0.0011 3.7E-08 54.8 7.6 126 51-184 125-262 (311)
63 2v78_A Fructokinase; transfera 97.1 0.0012 4.2E-08 54.6 7.0 127 51-184 125-264 (313)
64 3b1n_A Ribokinase, putative; r 96.9 0.0014 4.9E-08 54.8 6.4 121 53-184 134-259 (326)
65 3loo_A Anopheles gambiae adeno 96.9 0.0029 9.9E-08 53.8 8.4 131 49-184 171-323 (365)
66 4gm6_A PFKB family carbohydrat 96.9 0.002 6.9E-08 54.1 6.9 133 49-183 145-298 (351)
67 3ewm_A Uncharacterized sugar k 96.6 0.0029 1E-07 52.3 5.9 124 51-184 121-253 (313)
68 2hlz_A Ketohexokinase; non-pro 96.4 0.074 2.5E-06 43.8 13.3 121 52-184 144-278 (312)
69 3uq6_A Adenosine kinase, putat 96.0 0.014 4.7E-07 49.7 7.0 130 49-182 175-326 (372)
70 3bf5_A Ribokinase related prot 94.9 0.026 8.8E-07 46.7 4.7 109 53-184 139-252 (306)
71 3noy_A 4-hydroxy-3-methylbut-2 73.7 5.2 0.00018 34.4 5.5 83 4-95 54-141 (366)
72 3cu2_A Ribulose-5-phosphate 3- 59.1 11 0.00039 30.1 4.5 89 3-94 86-194 (237)
73 4g9p_A 4-hydroxy-3-methylbut-2 55.8 27 0.00091 30.4 6.6 90 4-96 46-146 (406)
74 4dgs_A Dehydrogenase; structur 52.8 16 0.00053 30.8 4.6 9 113-121 300-308 (340)
75 3usb_A Inosine-5'-monophosphat 49.4 74 0.0025 28.1 8.7 85 4-94 263-366 (511)
76 3h8v_A Ubiquitin-like modifier 47.5 1.1E+02 0.0037 25.0 8.8 81 4-92 54-167 (292)
77 1jw9_B Molybdopterin biosynthe 47.0 1E+02 0.0035 24.1 8.5 79 4-92 49-151 (249)
78 2e28_A Pyruvate kinase, PK; al 44.2 37 0.0013 30.8 5.9 83 5-92 182-277 (587)
79 3rcm_A TATD family hydrolase; 43.7 34 0.0012 27.8 5.1 49 44-94 79-134 (287)
80 1yad_A Regulatory protein TENI 42.4 78 0.0027 24.0 6.9 81 4-94 83-171 (221)
81 4fxs_A Inosine-5'-monophosphat 41.8 91 0.0031 27.3 8.0 87 4-94 238-341 (496)
82 1uqr_A 3-dehydroquinate dehydr 41.7 34 0.0011 25.8 4.4 41 44-91 57-97 (154)
83 3kbq_A Protein TA0487; structu 41.6 13 0.00045 28.3 2.2 48 46-101 54-103 (172)
84 1a3w_A Pyruvate kinase; allost 41.4 36 0.0012 30.4 5.2 84 5-92 202-296 (500)
85 3ctl_A D-allulose-6-phosphate 40.7 62 0.0021 25.4 6.1 89 3-94 74-174 (231)
86 3inp_A D-ribulose-phosphate 3- 40.7 31 0.0011 27.6 4.4 89 3-94 103-202 (246)
87 3jtm_A Formate dehydrogenase, 40.6 28 0.00094 29.4 4.3 13 54-66 247-259 (351)
88 4fo4_A Inosine 5'-monophosphat 40.2 1.3E+02 0.0044 25.4 8.4 87 3-94 114-218 (366)
89 3pp8_A Glyoxylate/hydroxypyruv 39.4 26 0.00088 29.0 3.8 56 54-121 220-280 (315)
90 1j4a_A D-LDH, D-lactate dehydr 37.8 23 0.00078 29.5 3.2 13 54-66 226-238 (333)
91 4avf_A Inosine-5'-monophosphat 37.8 95 0.0033 27.2 7.4 86 4-94 236-339 (490)
92 3nbm_A PTS system, lactose-spe 37.3 3.9 0.00013 28.9 -1.4 79 6-98 11-90 (108)
93 4g2n_A D-isomer specific 2-hyd 36.5 31 0.0011 29.0 3.9 56 54-121 254-313 (345)
94 3u80_A 3-dehydroquinate dehydr 35.7 42 0.0014 25.1 4.1 43 45-91 61-103 (151)
95 3lwz_A 3-dehydroquinate dehydr 33.7 39 0.0013 25.4 3.6 41 44-91 63-103 (153)
96 3k5p_A D-3-phosphoglycerate de 32.8 42 0.0014 29.1 4.2 14 54-67 235-248 (416)
97 2j6i_A Formate dehydrogenase; 31.3 32 0.0011 29.0 3.2 58 54-121 248-313 (364)
98 1xdw_A NAD+-dependent (R)-2-hy 30.5 30 0.001 28.7 2.8 13 54-66 225-237 (331)
99 3ovp_A Ribulose-phosphate 3-ep 29.8 1E+02 0.0035 24.0 5.7 86 3-95 81-177 (228)
100 3h5n_A MCCB protein; ubiquitin 29.3 1.2E+02 0.0041 25.3 6.4 78 4-91 136-238 (353)
101 1e0t_A Pyruvate kinase, PK; ph 29.1 79 0.0027 27.9 5.4 84 5-92 181-276 (470)
102 3evt_A Phosphoglycerate dehydr 28.7 45 0.0015 27.7 3.6 60 54-121 218-278 (324)
103 4af0_A Inosine-5'-monophosphat 28.6 2.1E+02 0.0071 25.9 8.0 87 4-94 288-391 (556)
104 1gqo_A Dehydroquinase; dehydra 28.6 35 0.0012 25.4 2.5 41 44-91 56-96 (143)
105 1dxy_A D-2-hydroxyisocaproate 28.5 28 0.00094 29.0 2.3 14 54-67 224-237 (333)
106 2him_A L-asparaginase 1; hydro 28.3 38 0.0013 28.7 3.1 42 46-92 93-134 (358)
107 1wwk_A Phosphoglycerate dehydr 27.6 59 0.002 26.5 4.1 60 54-121 223-283 (307)
108 3kip_A 3-dehydroquinase, type 27.3 50 0.0017 25.1 3.3 41 44-91 72-113 (167)
109 2yci_X 5-methyltetrahydrofolat 26.2 79 0.0027 25.5 4.6 50 46-97 115-173 (271)
110 3hg7_A D-isomer specific 2-hyd 26.1 46 0.0016 27.6 3.2 60 54-121 221-281 (324)
111 1xwy_A DNAse TATD, deoxyribonu 26.0 98 0.0034 23.8 5.0 49 44-94 77-132 (264)
112 1gdh_A D-glycerate dehydrogena 26.0 90 0.0031 25.6 5.0 56 54-121 229-288 (320)
113 1gtz_A 3-dehydroquinate dehydr 25.8 47 0.0016 25.0 2.8 41 44-91 62-103 (156)
114 3qtg_A Pyruvate kinase, PK; TI 25.6 1.9E+02 0.0063 25.5 7.1 84 4-92 191-286 (461)
115 1zud_1 Adenylyltransferase THI 25.3 1.6E+02 0.0053 23.1 6.1 81 4-95 46-150 (251)
116 1sc6_A PGDH, D-3-phosphoglycer 24.8 53 0.0018 28.1 3.4 14 54-67 224-237 (404)
117 1nns_A L-asparaginase II; amid 24.8 54 0.0018 27.3 3.4 42 45-92 70-111 (326)
118 1e2b_A Enzyme IIB-cellobiose; 24.6 50 0.0017 22.6 2.7 54 58-121 8-61 (106)
119 2g76_A 3-PGDH, D-3-phosphoglyc 24.5 63 0.0022 26.9 3.8 56 54-121 246-305 (335)
120 2uyg_A 3-dehydroquinate dehydr 24.4 46 0.0016 24.9 2.5 41 44-91 55-96 (149)
121 4e5n_A Thermostable phosphite 24.3 43 0.0015 27.8 2.7 13 54-66 227-239 (330)
122 3t05_A Pyruvate kinase, PK; te 24.3 1.3E+02 0.0045 27.4 6.1 83 6-92 203-296 (606)
123 4hy3_A Phosphoglycerate oxidor 23.2 52 0.0018 27.9 3.0 55 54-121 257-316 (365)
124 2ekl_A D-3-phosphoglycerate de 22.7 43 0.0015 27.5 2.3 13 54-66 223-235 (313)
125 3vk5_A MOEO5; TIM barrel, tran 22.4 2.7E+02 0.0092 22.9 7.1 35 54-94 66-104 (286)
126 2c4w_A 3-dehydroquinate dehydr 21.5 52 0.0018 25.2 2.4 40 45-91 68-108 (176)
127 3qua_A Putative uncharacterize 20.9 2.9E+02 0.0098 21.2 8.2 81 5-97 73-158 (199)
128 2yq5_A D-isomer specific 2-hyd 20.9 38 0.0013 28.4 1.6 14 54-67 227-240 (343)
129 2pi1_A D-lactate dehydrogenase 20.9 34 0.0012 28.5 1.4 13 54-66 221-233 (334)
130 2iz6_A Molybdenum cofactor car 20.8 1.1E+02 0.0039 22.9 4.3 104 4-127 64-168 (176)
131 2cuk_A Glycerate dehydrogenase 20.8 74 0.0025 26.0 3.4 59 54-121 220-279 (311)
132 3gvx_A Glycerate dehydrogenase 20.7 49 0.0017 27.0 2.3 13 54-66 200-212 (290)
133 3cf4_G Acetyl-COA decarboxylas 20.5 1.4E+02 0.0049 21.7 4.8 53 45-103 24-78 (170)
134 1tvm_A PTS system, galactitol- 20.4 1.3E+02 0.0044 20.6 4.2 39 57-100 25-63 (113)
135 4gud_A Imidazole glycerol phos 20.3 89 0.003 23.4 3.6 35 53-90 39-75 (211)
136 3khd_A Pyruvate kinase; malari 20.2 1.3E+02 0.0043 27.0 4.9 84 5-92 226-320 (520)
137 1h05_A 3-dehydroquinate dehydr 20.1 40 0.0014 25.1 1.5 40 45-91 59-98 (146)
138 1wls_A L-asparaginase; structu 20.0 39 0.0013 28.2 1.6 42 46-92 65-106 (328)
No 1
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A
Probab=100.00 E-value=5.1e-39 Score=271.57 Aligned_cols=168 Identities=23% Similarity=0.268 Sum_probs=138.7
Q ss_pred ccchhhcccceeEEEecCCchhhhhhcCCceEEecccCCCcchHHHHHHhcccCcEEEEccCCCCCHHHHHHHHHHHHHH
Q psy9483 2 GGILQCATVTLSIYVCSEGAVPILKNYSPELIVLPHYLDRNDSVDHIMYWMNRMHSVLIGPGLGTEPLVQSNVISIIHKL 81 (186)
Q Consensus 2 ~~~~~r~GaGlv~v~~~~~~~~~~~~~~Pe~~v~~~~~~~~~~~~~~~~~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~ 81 (186)
+++|+|+|||+|++++|+++...++++.||+|+.+- + ...++..+.++++|+++||||||+++++.++++.+++
T Consensus 50 a~aAlr~GaGlv~~~~~~~~~~~~~~~~Pe~m~~~~--~--~~~~~~~~~l~~~davviGPGlg~~~~~~~~~~~~l~-- 123 (279)
T 3rpz_A 50 GLGAMRSGLGKLVIGTSENVIPLIVPVLPEATYWRD--G--WKKAADAQLEETYRAIAIGPGLPQTESVQQAVDHVLT-- 123 (279)
T ss_dssp HHHHHTTTCSEEEEEECTTTHHHHTTTCTTCEEEET--H--HHHTTTSCCSSCCSEEEECTTCCCCHHHHHHHHHHTT--
T ss_pred HHHHHHhCCCeEEEEecHHHHHHHHhcCCeeEEccc--c--ccchhhHhhccCCCEEEECCCCCCCHHHHHHHHHHHh--
Confidence 368999999999999999999999999999999631 0 0001122356889999999999999988887776653
Q ss_pred HhcCCCCCEEEecccccccccCcccccccCCCeEecCCHHHHhhhcCCC--h-----HHHHH-HHHhCCCEEEEEeCCee
Q psy9483 82 KAANLNVPLVIDADGLKLVAEHPGLIQDYRGPVYLTPNKREYENLLSGS--E-----VNAAY-IKQGHPNLTVIVKGHED 153 (186)
Q Consensus 82 ~~~~~~~p~VlDadal~~l~~~~~l~~~~~~~~iiTPh~~E~~rL~~~~--~-----~~~a~-~a~~~~~~~vvlKG~~~ 153 (186)
. .+|+||||||+++ +.+.....|+|||||.+||+||++.+ + .+.++ +++++ +++|++||.+|
T Consensus 124 --~--~~p~VlDAdal~~-----~~l~~~~~~~vlTPN~~E~~~L~g~~~~~~~~d~~~aa~~la~~~-~~~VvlKG~~~ 193 (279)
T 3rpz_A 124 --A--DCPVILDAGALAK-----RTYPKREGPVILTPHPGEFFRMTGVPVNELQKKRAEYAKEWAAQL-QTVIVLKGNQT 193 (279)
T ss_dssp --S--SSCEEECGGGCCS-----CCCCCCSSCEEECCCHHHHHHHHCCCHHHHTTSHHHHHHHHHHHH-TSEEEECSTTC
T ss_pred --h--CCCEEEECCccch-----hhhhhccCCEEEecCHHHHHHHhCCCccchHHHHHHHHHHHHHHc-CeEEEEeCCCc
Confidence 3 6899999999996 22333346799999999999999972 2 23677 99999 59999999999
Q ss_pred EEEcCC-eEEEEcCCCCCCCCCChhHHHHhhhc
Q psy9483 154 VIKNNQ-ISLTCKEGNSWRRCGGQGDLVAGHRD 185 (186)
Q Consensus 154 ~I~~~~-~~~~~~~g~~~la~~GsGDvLaGiia 185 (186)
+|++++ +.|++.+|+|+|+++||||+|||+|+
T Consensus 194 vi~~~~g~~~~~~~g~~~~at~GtGD~Lag~ia 226 (279)
T 3rpz_A 194 VIAFPDGDCWLNPTGNGALAKGGTGDTLTGMIL 226 (279)
T ss_dssp EEECTTSCEEECCCCCGGGCSTTHHHHHHHHHH
T ss_pred EEECCCceEEEeCCCCCCCCCCChHHHHHHHHH
Confidence 999876 78999999999999999999999986
No 2
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=100.00 E-value=1.9e-37 Score=280.19 Aligned_cols=176 Identities=22% Similarity=0.331 Sum_probs=151.7
Q ss_pred ccchhhcccceeEEEecCCchhhhhhcCCceEEecccCC----CcchHHHHHHhcccCcEEEEccCCCCCHHHHHHHHHH
Q psy9483 2 GGILQCATVTLSIYVCSEGAVPILKNYSPELIVLPHYLD----RNDSVDHIMYWMNRMHSVLIGPGLGTEPLVQSNVISI 77 (186)
Q Consensus 2 ~~~~~r~GaGlv~v~~~~~~~~~~~~~~Pe~~v~~~~~~----~~~~~~~~~~~~~~~~aivIGpGlg~~~~~~~~~~~~ 77 (186)
+++|+|+|||+|++++|+++...++++.||+|+++++.+ +.+..+++.++++++|+++|||||++++++.+++..+
T Consensus 264 a~aAlr~GaGlv~~~~~~~~~~~~~~~~PE~m~~~~~~~~~~~~~~~~~~~~~~~~~~davviGpGlg~~~~~~~~~~~~ 343 (502)
T 3rss_A 264 GMGSLKVGTGLVKLAVPFPQNLIATSRFPELISVPIDTEKGFFSLQNLQECLELSKDVDVVAIGPGLGNNEHVREFVNEF 343 (502)
T ss_dssp HHHHHHTTCSEEEEEEETTTHHHHHHHCTTSEEEEECCSSSSCCGGGHHHHHHHHTTCSEEEECTTCCCSHHHHHHHHHH
T ss_pred HHHHHHhCcCeEEEEEcHHHHHHHhhcCCeEEEecccccccccchhhHHHHHHHhccCCEEEEeCCCCCCHHHHHHHHHH
Confidence 368999999999999999999999999999999987321 1234677888889999999999999999888888777
Q ss_pred HHHHHhcCCCCCEEEecccccccccCcccccccCCCeEecCCHHHHhhhcCCC------hHHHHH-HHHhCCCEEEEEeC
Q psy9483 78 IHKLKAANLNVPLVIDADGLKLVAEHPGLIQDYRGPVYLTPNKREYENLLSGS------EVNAAY-IKQGHPNLTVIVKG 150 (186)
Q Consensus 78 l~~~~~~~~~~p~VlDadal~~l~~~~~l~~~~~~~~iiTPh~~E~~rL~~~~------~~~~a~-~a~~~~~~~vvlKG 150 (186)
++. . ++|+||||||+++++ +++++.++.++|||||.+||+||+|.+ +.+.++ +++++ +++|++||
T Consensus 344 l~~---~--~~pvVlDadgl~~l~--~~ll~~~~~~~vlTPN~~E~~~L~g~~~~~~~~d~~aa~~la~~~-~~~VvlKG 415 (502)
T 3rss_A 344 LKT---L--EKPAVIDADAINVLD--TSVLKERKSPAVLTPHPGEMARLVKKTVGDVKYNYELAEEFAKEN-DCVLVLKS 415 (502)
T ss_dssp HHH---C--CSCEEECHHHHHTCC--HHHHHHCSSCEEECCCHHHHHHHHTCCHHHHTTCHHHHHHHHHHH-TSEEEECS
T ss_pred HHh---c--CCCEEEeCcccchhc--HHHHhccCCCEEEeCCHHHHHHHhCCCccchHHHHHHHHHHHHHc-CCEEEEeC
Confidence 654 4 799999999999887 455554456899999999999999961 245778 99999 59999999
Q ss_pred CeeEEEcCCeEEEEcCCCCCCCCCChhHHHHhhhc
Q psy9483 151 HEDVIKNNQISLTCKEGNSWRRCGGQGDLVAGHRD 185 (186)
Q Consensus 151 ~~~~I~~~~~~~~~~~g~~~la~~GsGDvLaGiia 185 (186)
.+|+|+++++.|++.+|+|+|+++||||+|||+|+
T Consensus 416 ~~~vi~~~~~~~~~~~g~~~~at~GsGD~Lag~ia 450 (502)
T 3rss_A 416 ATTIVTDGEKTLFNITGNTGLSKGGSGDVLTGMIA 450 (502)
T ss_dssp SSEEEECSSCEEEECCCCGGGSSTTHHHHHHHHHH
T ss_pred CCeEEEcCCEEEEECCCCCccccCCchHHHHHHHH
Confidence 99999998899999999999999999999999986
No 3
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori}
Probab=100.00 E-value=4.6e-36 Score=269.51 Aligned_cols=156 Identities=22% Similarity=0.252 Sum_probs=126.2
Q ss_pred ccchhhcccceeEEEecCCchhhhhhcCCceEEecccCCCcchHHHHHHhcccCcEEEEccCCCCCHHHHHHHHHHHHHH
Q psy9483 2 GGILQCATVTLSIYVCSEGAVPILKNYSPELIVLPHYLDRNDSVDHIMYWMNRMHSVLIGPGLGTEPLVQSNVISIIHKL 81 (186)
Q Consensus 2 ~~~~~r~GaGlv~v~~~~~~~~~~~~~~Pe~~v~~~~~~~~~~~~~~~~~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~ 81 (186)
+++|+|+|||+|++++|++.... +.+.||+|+++. +.+++|+++||||||++++ + ++++++
T Consensus 254 a~aAlr~GaGlv~~~~~~~~~~~-~~~~pe~m~~~~-------------~~~~~~a~~iGPGlG~~~~--~-l~~~l~-- 314 (475)
T 3k5w_A 254 ALSALSFGSGVVSVQALECEITS-NNKPLELVFCEN-------------FPNLLSAFALGMGLENIPK--D-FNRWLE-- 314 (475)
T ss_dssp HHHHHHTTCSEEEEEESSSCCSS-SSSCTTSEEESS-------------CCSSCSEEEECTTCSSCCT--T-HHHHHH--
T ss_pred HHHHHHhCCCeEEEeccHHHhhc-ccCChhheeehh-------------hccCCCEEEEcCCCCCCHH--H-HHHHHh--
Confidence 46899999999999999984322 456799999763 2368999999999999864 4 666664
Q ss_pred HhcCCCCCEEEecccccccccCcccccccCCCeEecCCHHHHhhhcCC-----C--h-----HHHHH-HHHhCCCEEEEE
Q psy9483 82 KAANLNVPLVIDADGLKLVAEHPGLIQDYRGPVYLTPNKREYENLLSG-----S--E-----VNAAY-IKQGHPNLTVIV 148 (186)
Q Consensus 82 ~~~~~~~p~VlDadal~~l~~~~~l~~~~~~~~iiTPh~~E~~rL~~~-----~--~-----~~~a~-~a~~~~~~~vvl 148 (186)
. + |+|||||||+.. +++...+.++|||||++||+||++. + + .+.++ +++++++++|+|
T Consensus 315 --~--~-p~VlDADaL~~~----~~~~~~~~~~VlTPh~~E~~rL~g~~~~~v~~~~~~~d~~~aa~~la~~~g~~~Vvl 385 (475)
T 3k5w_A 315 --L--A-PCVLDAGVFYHK----EILQALEKEAVLTPHPKEFLSLLNLVGINISMLELLDNKLEIARDFSQKYPKVVLLL 385 (475)
T ss_dssp --H--S-CEEEEGGGGGSG----GGGTTTTSSEEEECCHHHHHHHHHHTSCCCCTTSGGGSCC--CHHHHHHCTTEEEEE
T ss_pred --c--C-CEEEECcccCCc----hhhhccCCCEEECCCHHHHHHHhCCccCCCCcchhHHHHHHHHHHHHHHcCCeEEEE
Confidence 3 7 999999999842 2222234569999999999999964 1 1 23677 999993399999
Q ss_pred eCCeeEEEcCCeEEEEcCCCCCCCCCChhHHHHhhhc
Q psy9483 149 KGHEDVIKNNQISLTCKEGNSWRRCGGQGDLVAGHRD 185 (186)
Q Consensus 149 KG~~~~I~~~~~~~~~~~g~~~la~~GsGDvLaGiia 185 (186)
||.+|+|+++++.|++.+|+|+|+++||||+|||+||
T Consensus 386 KG~~~vI~~~~~~~~~~~g~~~mat~GtGdvLsg~Ia 422 (475)
T 3k5w_A 386 KGANTLIAHQGQVFINILGSVALAKAGSGDVLAGLIL 422 (475)
T ss_dssp CSSSEEEEETTEEEEECCCCGGGCSTTHHHHHHHHHH
T ss_pred eCCCCEEECCCEEEEECCCCCCCCCCCHHHHHHHHHH
Confidence 9999999998899999999999999999999999997
No 4
>2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A
Probab=100.00 E-value=8.3e-35 Score=248.97 Aligned_cols=173 Identities=20% Similarity=0.247 Sum_probs=146.4
Q ss_pred cchhhcccceeEEEecCCchhhhhhcCCceEEecccCCCcchHHHHHHhcccCcEEEEccCCCCCHHHHHHHHHHHHHHH
Q psy9483 3 GILQCATVTLSIYVCSEGAVPILKNYSPELIVLPHYLDRNDSVDHIMYWMNRMHSVLIGPGLGTEPLVQSNVISIIHKLK 82 (186)
Q Consensus 3 ~~~~r~GaGlv~v~~~~~~~~~~~~~~Pe~~v~~~~~~~~~~~~~~~~~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~ 82 (186)
.+++|+|+|+||++|+++....+....||+|+.++. + .+++.+.++++|+++||||+++++++.+++.++++..+
T Consensus 65 ~aal~~Gaglvt~~t~~~~~~~v~~~~pe~~~~~~~-~----~~ql~~~~~~~dav~IG~Gl~~~~~~~~~v~~~l~~~~ 139 (310)
T 2r3b_A 65 EACINSGAGLTTVITDVKNHGPLHARCPEAMVVGFE-E----TVLLTNVVEQADVILIGPGLGLDATAQQILKMVLAQHQ 139 (310)
T ss_dssp HHHHHHTCSEEEEECCGGGHHHHHHHCTTCEEECTT-C----HHHHHHHHHHCSEEEECTTCCSSHHHHHHHHHHHHHCC
T ss_pred HHHHHhCcCcEEEEEChhhHhHHhhCChhheEecCC-c----HHHHHHHhccCCEEEEeCCCCCCHHHHHHHHHHHHhcC
Confidence 468999999999999999999999999999998872 2 24555666789999999999999989899988887543
Q ss_pred hcCCCCCEEEecccccccccCcccccccCCCeEecCCHHHHhhhcCC--ChH--HHHH-HHHhCCCEEEEEeCCeeEEEc
Q psy9483 83 AANLNVPLVIDADGLKLVAEHPGLIQDYRGPVYLTPNKREYENLLSG--SEV--NAAY-IKQGHPNLTVIVKGHEDVIKN 157 (186)
Q Consensus 83 ~~~~~~p~VlDadal~~l~~~~~l~~~~~~~~iiTPh~~E~~rL~~~--~~~--~~a~-~a~~~~~~~vvlKG~~~~I~~ 157 (186)
. ++|+||||||+++++.+.++++. +.++|||||.+|++||++. +++ +.+. +++++ +++|++||.+|+|++
T Consensus 140 -~--~~pvVlDa~g~~ll~~~~~~l~~-~~~~viTPN~~E~~~L~g~~~~~~~~~~a~~aA~~l-g~~VvlKG~~~vi~~ 214 (310)
T 2r3b_A 140 -K--QQWLIIDGSAITLFSQGNFSLTY-PEKVVFTPHQMEWQRLSHLPIEQQTLANNQRQQAKL-GSTIVLKSHRTTIFH 214 (310)
T ss_dssp -T--TCEEEEETHHHHHHHHTTCCCSS-GGGEEEECCHHHHHHHHCCCGGGCCHHHHHHHHHHH-TSEEEECSTTCEEEC
T ss_pred -C--CCcEEEcCCcchhcccchhhhcC-CCCEEEcCCHHHHHHHhCCCCCcccchHHHHHHHHh-CcEEEEeCCceEEEE
Confidence 3 68999999999999887665543 4579999999999999997 222 2335 88888 599999999999998
Q ss_pred CCeEEEEcCCCCCCCCCChhHHHHhhhc
Q psy9483 158 NQISLTCKEGNSWRRCGGQGDLVAGHRD 185 (186)
Q Consensus 158 ~~~~~~~~~g~~~la~~GsGDvLaGiia 185 (186)
+++.|++..|+++|+++||||+|||+|+
T Consensus 215 ~~~~~~~~~g~~~~~t~GtGD~Lag~Ia 242 (310)
T 2r3b_A 215 AGEPFQNTGGNPGMATGGTGDTLAGIIA 242 (310)
T ss_dssp SSSCEECCCCCGGGCSTTHHHHHHHHHH
T ss_pred CCEEEEECCCCCCCCCCChHHHHHHHHH
Confidence 6668999999999999999999999986
No 5
>3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans}
Probab=100.00 E-value=6e-34 Score=243.74 Aligned_cols=170 Identities=22% Similarity=0.323 Sum_probs=141.2
Q ss_pred cchhhcccceeEEEecCCchhhhhhcCCceEEecccCCCcchHHHHHHhcccCcEEEEccCCCCCHHHHHHHHHHHHHHH
Q psy9483 3 GILQCATVTLSIYVCSEGAVPILKNYSPELIVLPHYLDRNDSVDHIMYWMNRMHSVLIGPGLGTEPLVQSNVISIIHKLK 82 (186)
Q Consensus 3 ~~~~r~GaGlv~v~~~~~~~~~~~~~~Pe~~v~~~~~~~~~~~~~~~~~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~ 82 (186)
.+++|+|+|+||++|+++....+....||+|+.++. + .+++.+.++++|+++||||+++++++.+++.++++..+
T Consensus 79 ~aal~~Gaglvt~~t~q~~~~~v~~~~pe~~~~~~~-~----~~ql~~~~~~~dav~IG~Gl~~~~~~~~~v~~~l~~~~ 153 (311)
T 3bgk_A 79 LACVNSGAGLVTVATHKDNITALHSHLPEAMAFDMV-E----KDRLSEQITAADVVLMGPGLAEDDLAQTTFDVVWQAIE 153 (311)
T ss_dssp HHHHHTTCSEEEEEECGGGHHHHHHHCTTSEEEETT-C----HHHHHHHHHHCSEEEECTTCCSSHHHHHHHHHHHHHCC
T ss_pred HHHHHhCcCeEEEEEChhhHhHHhhCChhHheeccc-c----HHHHHHHhccCCEEEEcCCCCCCHHHHHHHHHHHHHcC
Confidence 468999999999999999999999999999998872 2 24566666789999999999999989899988887543
Q ss_pred hcCCCCCEEEecccccccccCccc-ccccCCCeEecCCHHHHhhhcCC--Ch------HHHHH-HHHhCCCEEEEEeCCe
Q psy9483 83 AANLNVPLVIDADGLKLVAEHPGL-IQDYRGPVYLTPNKREYENLLSG--SE------VNAAY-IKQGHPNLTVIVKGHE 152 (186)
Q Consensus 83 ~~~~~~p~VlDadal~~l~~~~~l-~~~~~~~~iiTPh~~E~~rL~~~--~~------~~~a~-~a~~~~~~~vvlKG~~ 152 (186)
. ++|+||||||+++++.+.++ ++ +.++|||||.+|++||++. ++ .+.++ +++ + ++|++||.+
T Consensus 154 -~--~~pvVlDa~g~~ll~~~~~l~L~--~~~~viTPN~~E~~~L~g~~~~~~~~d~~~~aa~~l~~--g-~~VvlkG~~ 225 (311)
T 3bgk_A 154 -P--KQTLIIDGSAINLLAKRKPAIWP--TKQIILTPHQKEWERLSGLTIPEQIEAATQTALAHFPK--E-TILVAKSHQ 225 (311)
T ss_dssp -T--TSEEEEETHHHHHHHHCC-CCCS--CSCEEEECCSCC-CTTTCCCSTTCCHHHHHHHHTTSCT--T-CEEEECSSS
T ss_pred -C--CCeEEEeCChhhhhccChhhcCC--CCCEEECCcHHHHHHHhCCCCCcchhhHHHHHHHHHhc--C-CEEEEeCCC
Confidence 3 68999999999999877655 43 4679999999999999997 22 12344 444 4 899999999
Q ss_pred eEEEcCCeEEEEcCCCCCCCCCChhHHHHhhhc
Q psy9483 153 DVIKNNQISLTCKEGNSWRRCGGQGDLVAGHRD 185 (186)
Q Consensus 153 ~~I~~~~~~~~~~~g~~~la~~GsGDvLaGiia 185 (186)
|+|+++++.|++..+++.|+++||||+|||+|+
T Consensus 226 ~~i~~~~~~~~~~~~~~~~~t~GtGD~Lag~ia 258 (311)
T 3bgk_A 226 TKIYQGQKIGHIQVGGPYQATGGMGDTLAGMIA 258 (311)
T ss_dssp CEEEETTEEEEECCCCGGGCSTTHHHHHHHHHH
T ss_pred eEEEECCEEEEECCCCCCCCCCcHHHHHHHHHH
Confidence 999986678999999999999999999999986
No 6
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=99.95 E-value=1.1e-28 Score=206.92 Aligned_cols=161 Identities=17% Similarity=0.182 Sum_probs=124.6
Q ss_pred cceeEEEecCCchhhhh------hcCCceEEecccCCCcchHHHHHHhcccCcEEEEccCCCCCHHHHHHHHHHHHHHHh
Q psy9483 10 VTLSIYVCSEGAVPILK------NYSPELIVLPHYLDRNDSVDHIMYWMNRMHSVLIGPGLGTEPLVQSNVISIIHKLKA 83 (186)
Q Consensus 10 aGlv~v~~~~~~~~~~~------~~~Pe~~v~~~~~~~~~~~~~~~~~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~ 83 (186)
.=||+.+|..=..+..+ ..+| +|... .+|+.++.+.+|+++||+|+.++++. +.+....+.+++
T Consensus 15 ~PLvh~iTN~V~~n~~AN~lLA~GasP-iMa~~--------~~E~~e~~~~a~al~iNiGtl~~~~~-~~m~~A~~~A~~ 84 (265)
T 3hpd_A 15 RPLVHNITNFVVMNTTANALLALGASP-VMAHA--------EEELEEMIRLADAVVINIGTLDSGWR-RSMVKATEIANE 84 (265)
T ss_dssp CCEEEEECCTTTHHHHHHHHHHHTCEE-EECCC--------TTTHHHHHHHCSEEEEECTTCCHHHH-HHHHHHHHHHHH
T ss_pred CCcEEeccchhhHHHHHHHHHHhCCch-hhcCC--------HHHHHHHHHHCCeEEEECCCCChHHH-HHHHHHHHHHHH
Confidence 34566666554443322 3344 55433 24666778889999999999866554 445566677777
Q ss_pred cCCCCCEEEecccccccccCcc----cccccCCCeEecCCHHHHhhhcCC-------Ch--------HHHHH-HHHhCCC
Q psy9483 84 ANLNVPLVIDADGLKLVAEHPG----LIQDYRGPVYLTPNKREYENLLSG-------SE--------VNAAY-IKQGHPN 143 (186)
Q Consensus 84 ~~~~~p~VlDadal~~l~~~~~----l~~~~~~~~iiTPh~~E~~rL~~~-------~~--------~~~a~-~a~~~~~ 143 (186)
. ++||||||+|+..++.|.+ ++.. +|+|||||.+|+.+|+|. |. .+.++ ++++| +
T Consensus 85 ~--~~PvVLDPVg~gas~~R~~~~~~ll~~--~~~vIrgN~sEi~~L~g~~~~~~gvds~~~~~~d~~~~a~~lA~~~-~ 159 (265)
T 3hpd_A 85 L--GKPIVLDPVGAGATKFRTRVSLEILSR--GVDVLKGNFGEISALLGEEGKTRGVDSLEYGEEEAKKLTMNAAREF-N 159 (265)
T ss_dssp H--TCCEEEECTTBTTBHHHHHHHHHHHHH--CCSEEEEEHHHHHHHHHHHC----------CHHHHHHHHHHHHHHT-T
T ss_pred c--CCCEEEcCCCCCCcHHHHHHHHHHHhc--CCcEEcCCHHHHHHHhcccCCCCCccCccccHHHHHHHHHHHHHHh-C
Confidence 7 8999999999999888753 3332 579999999999999975 11 12677 99999 5
Q ss_pred EEEEEeCCeeEEEcCCeEEEEcCCCCCCC-CCChhHHHHhhhc
Q psy9483 144 LTVIVKGHEDVIKNNQISLTCKEGNSWRR-CGGQGDLVAGHRD 185 (186)
Q Consensus 144 ~~vvlKG~~~~I~~~~~~~~~~~g~~~la-~~GsGDvLaGiia 185 (186)
++|++||++|+|+++++.|++.+|+|+|+ ++||||+|+|+||
T Consensus 160 ~vVvlkG~~d~I~dg~~~~~~~~G~~~m~~vtGtGc~Lsg~ia 202 (265)
T 3hpd_A 160 TTVAVTGAVDYVSDGRRTFAVYNGHELLGRVTGTGCMVAALTG 202 (265)
T ss_dssp SEEEEESSSEEEECSSCEEEECCCCGGGGGSTTHHHHHHHHHH
T ss_pred CEEEEeCCCeEEEcCCEEEEECCCChHhhcCCccchHHHHHHH
Confidence 99999999999999999999999999997 6999999999997
No 7
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=99.94 E-value=2e-27 Score=200.08 Aligned_cols=135 Identities=16% Similarity=0.179 Sum_probs=113.1
Q ss_pred HHHHHHhcccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCcc----cccccCCCeEecCCH
Q psy9483 45 VDHIMYWMNRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHPG----LIQDYRGPVYLTPNK 120 (186)
Q Consensus 45 ~~~~~~~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~~----l~~~~~~~~iiTPh~ 120 (186)
.+|+.++.+++|+++||||++++ +..+.+...++.+++. ++|+|||||++.....+.+ ++ . ..++|||||.
T Consensus 49 ~~e~~e~~~~a~alvIn~G~l~~-~~~~~~~~a~~~a~~~--~~PvVlDPVg~gas~~r~~~~~~Ll-~-~~~~VItpN~ 123 (273)
T 3dzv_A 49 PREFPQMFQQTSALVLNLGHLSQ-EREQSLLAASDYARQV--NKLTVVDLVGYGASDIRNEVGEKLV-H-NQPTVVKGNL 123 (273)
T ss_dssp GGGHHHHHTTCSEEEEECCSCCH-HHHHHHHHHHHHHHHT--TCCEEEECTTTTSCHHHHHHHHHHH-H-TCCSEEEEEH
T ss_pred HHHHHHHHHHCCeEEEecCCCCh-HHHHHHHHHHHHHHHc--CCcEEEchhhcCCcccCHHHHHHHH-h-cCCcEECCCH
Confidence 46788889999999999999865 4556666777777777 8999999999998776643 33 2 3579999999
Q ss_pred HHHhhhcCCC-------------------h-HHHHH-HHHhCCC-EEEEEeCCeeEEEcCCeEEEEcCCCCCCC-CCChh
Q psy9483 121 REYENLLSGS-------------------E-VNAAY-IKQGHPN-LTVIVKGHEDVIKNNQISLTCKEGNSWRR-CGGQG 177 (186)
Q Consensus 121 ~E~~rL~~~~-------------------~-~~~a~-~a~~~~~-~~vvlKG~~~~I~~~~~~~~~~~g~~~la-~~GsG 177 (186)
+|+++|+|.+ + .+.++ +++++ + ++|++||..|+|+++++.|++.+|+++|+ ++|||
T Consensus 124 ~E~~~L~g~~~~~~GVds~~~~~~~~~~~d~~~aa~~la~~~-~~~~VvlkG~~D~i~dg~~~~~~~~G~~~~~~v~GtG 202 (273)
T 3dzv_A 124 SEMRTFCQLVSHGRGVDGSPLDQSEEAIEELIQALRQQTQKF-PQTVFLATGIQDVLVSQEQVIVLQNGVPELDCFTGTG 202 (273)
T ss_dssp HHHHHHTTCCCC-------CGGGSHHHHHHHHHHHHHHHHHS-TTCEEEEESSSEEEECSSCEEEECCCCGGGGSSTTHH
T ss_pred HHHHHHhCCcccccccccccccchhhhhHHHHHHHHHHHHHh-CCeEEEEECCeeEEEcCCEEEEeCCCCcccCCcCCch
Confidence 9999999851 1 12567 99999 7 99999999999999999999999999996 79999
Q ss_pred HHHHhhhc
Q psy9483 178 DLVAGHRD 185 (186)
Q Consensus 178 DvLaGiia 185 (186)
|+|||+||
T Consensus 203 c~Ls~~Ia 210 (273)
T 3dzv_A 203 DLVGALVA 210 (273)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999987
No 8
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=99.93 E-value=7.5e-27 Score=195.43 Aligned_cols=134 Identities=18% Similarity=0.204 Sum_probs=109.5
Q ss_pred HHHHHhcccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCcc----cccccCCCeEecCCHH
Q psy9483 46 DHIMYWMNRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHPG----LIQDYRGPVYLTPNKR 121 (186)
Q Consensus 46 ~~~~~~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~~----l~~~~~~~~iiTPh~~ 121 (186)
+++.++++++|+++||||++ +++..+.+..+++.+++. ++|+|||||+++.+..+.+ +++.. ++|||||.+
T Consensus 48 ~e~~~~~~~~dalvi~~G~~-~~~~~~~~~~~~~~a~~~--~~pvVlDpv~~~~~~~~~~~~~~ll~~~--~~vITPN~~ 122 (265)
T 1v8a_A 48 EELEEMIRLADAVVINIGTL-DSGWRRSMVKATEIANEL--GKPIVLDPVGAGATKFRTRVSLEILSRG--VDVLKGNFG 122 (265)
T ss_dssp TTHHHHHHHCSEEEEECTTC-CHHHHHHHHHHHHHHHHH--TCCEEEECTTBTTBHHHHHHHHHHHHHC--CSEEEEEHH
T ss_pred HHHHHHHHHCCEEEEEECCC-CHHHHHHHHHHHHHHHHc--CCcEEEcCccccccccCHHHHHHHHHhC--CcEEcCCHH
Confidence 45666778899999999999 555556666666666666 8999999999987766542 33222 799999999
Q ss_pred HHhhhcCCC-----------h----HHHHH-HHHhCCCEEEEEeCCeeEEEcCCeEEEEcCCCCCC-CCCChhHHHHhhh
Q psy9483 122 EYENLLSGS-----------E----VNAAY-IKQGHPNLTVIVKGHEDVIKNNQISLTCKEGNSWR-RCGGQGDLVAGHR 184 (186)
Q Consensus 122 E~~rL~~~~-----------~----~~~a~-~a~~~~~~~vvlKG~~~~I~~~~~~~~~~~g~~~l-a~~GsGDvLaGii 184 (186)
|+++|+|.+ . .+.++ +++++ +++|++||..|+|+++++.|++.+|+++| +++||||+|+|+|
T Consensus 123 E~~~L~g~~~~~~gvd~~~~~~~~~~~aa~~la~~~-~~~VvlkG~~d~i~~~~~~~~~~~g~~~~~~~~GtGD~Lsg~i 201 (265)
T 1v8a_A 123 EISALLGEEGKTRGVDSLEYGEEEAKKLTMNAAREF-NTTVAVTGAVDYVSDGRRTFAVYNGHELLGRVTGTGCMVAALT 201 (265)
T ss_dssp HHHHHHHHHC----------CHHHHHHHHHHHHHHT-TSEEEEESSSEEEECSSCEEEECCCCGGGGGSTTHHHHHHHHH
T ss_pred HHHHHhCCcccccCcCcccccHHHHHHHHHHHHHHh-CcEEEEcCCCcEEEcCCEEEEEcCCCcCcCCccChhHHHHHHH
Confidence 999998741 1 12677 99999 59999999999999988999999999999 8999999999998
Q ss_pred c
Q psy9483 185 D 185 (186)
Q Consensus 185 a 185 (186)
+
T Consensus 202 a 202 (265)
T 1v8a_A 202 G 202 (265)
T ss_dssp H
T ss_pred H
Confidence 7
No 9
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=99.93 E-value=3.6e-26 Score=208.04 Aligned_cols=165 Identities=12% Similarity=0.073 Sum_probs=126.2
Q ss_pred hhcccceeEEEecCCchhhhhhcC-----CceEEecccCCCcchHHHHHHhccc-CcEEEEccCCCCCHHHHHHHHHHHH
Q psy9483 6 QCATVTLSIYVCSEGAVPILKNYS-----PELIVLPHYLDRNDSVDHIMYWMNR-MHSVLIGPGLGTEPLVQSNVISIIH 79 (186)
Q Consensus 6 ~r~GaGlv~v~~~~~~~~~~~~~~-----Pe~~v~~~~~~~~~~~~~~~~~~~~-~~aivIGpGlg~~~~~~~~~~~~l~ 79 (186)
+|...-||+.+|..-.++..+... ..+|. +..+|+.++.+. +++++||+|++++ .+.+..+++
T Consensus 260 vr~~~PLvh~iTN~V~~n~~AN~~La~GasPiM~--------~~~~E~~e~~~~~~~alvin~G~l~~---~~~~~~a~~ 328 (540)
T 3nl6_A 260 TLKARPLVQHITNKVHQNFGANVTLALGSSPIMS--------EIQSEVNDLAAIPHATLLLNTGSVAP---PEMLKAAIR 328 (540)
T ss_dssp HHHHCCEEEEECCHHHHHHHHHHHHHTTSEEECC--------CCHHHHHHHTTSTTCEEEEESSCSCC---HHHHHHHHH
T ss_pred HHhcCCeEEEccccchHHHHHHHHHHcCCChhhc--------CCHHHHHHHHhccCCeEEEeCCCCCH---HHHHHHHHH
Confidence 455556666666655444333211 22332 345788899998 9999999999977 455556666
Q ss_pred HHHhcCCCCCEEEecccccccccCcc----cccccCCCeEecCCHHHHhhhcCCC-----------h------HHHHH-H
Q psy9483 80 KLKAANLNVPLVIDADGLKLVAEHPG----LIQDYRGPVYLTPNKREYENLLSGS-----------E------VNAAY-I 137 (186)
Q Consensus 80 ~~~~~~~~~p~VlDadal~~l~~~~~----l~~~~~~~~iiTPh~~E~~rL~~~~-----------~------~~~a~-~ 137 (186)
.+++. ++|+|||||++..+..+.+ +++.. .++|||||.+|+++|+|.+ + .+.++ +
T Consensus 329 ~a~~~--~~PvVlDPVg~~a~~~r~~~~~~Ll~~~-~~~vItpN~~E~~~L~g~~~~~~~GVds~~~~~~~d~~~aA~~l 405 (540)
T 3nl6_A 329 AYNDV--KRPIVFDPVGYSATETRLLLNNKLLTFG-QFSCIKGNSSEILGLAELNKERMKGVDASSGISNELLIQATKIV 405 (540)
T ss_dssp HHHTT--TCCEEEECTTCTTSHHHHHHHHHHTTSC-CCSEEEECHHHHHHHTTC--------------CCHHHHHHHHHH
T ss_pred HHHHc--CCCEEEChHHhhcccccHHHHHHHHhhC-CCeEECCCHHHHHHHhCCCcccccccccccccCHHHHHHHHHHH
Confidence 66666 8999999999998876653 33322 5799999999999999842 0 12677 9
Q ss_pred HHhCCCEEEEEeCCeeEEEcC-------------------CeEEEEcCCC-CCCC-CCChhHHHHhhhc
Q psy9483 138 KQGHPNLTVIVKGHEDVIKNN-------------------QISLTCKEGN-SWRR-CGGQGDLVAGHRD 185 (186)
Q Consensus 138 a~~~~~~~vvlKG~~~~I~~~-------------------~~~~~~~~g~-~~la-~~GsGDvLaGiia 185 (186)
+++| +++|++||.+|+|+++ ++.|++.+|+ |+|+ ++||||+|+|+||
T Consensus 406 A~~~-~~vVvlkG~~D~I~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~m~~vtGtGc~Lsg~Ia 473 (540)
T 3nl6_A 406 AFKY-KTVAVCTGEFDFIADGTIEGKYSLSKGTNGTSVEDIPCVAVEAGPIEIMGDITASGCSLGSTIA 473 (540)
T ss_dssp HHHT-TSEEEECSSSEEEEECCGGGBCCSSSCCSSCCTTSSCEEEEECSCCGGGGSSTTHHHHHHHHHH
T ss_pred HHHh-CCEEEEcCCCeEEECCCccccccccccccccccCCccEEEECCCChhhccCccCchHHHHHHHH
Confidence 9999 5999999999999998 7899999999 9997 7999999999997
No 10
>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A*
Probab=99.91 E-value=2.7e-24 Score=180.20 Aligned_cols=168 Identities=15% Similarity=0.173 Sum_probs=127.3
Q ss_pred chhhcccceeEEEecCCchhh-----hh-hcCCceEEecccCCCcchHHHHHHhcccCcEEEEccCCCCCHHHHHHHHHH
Q psy9483 4 ILQCATVTLSIYVCSEGAVPI-----LK-NYSPELIVLPHYLDRNDSVDHIMYWMNRMHSVLIGPGLGTEPLVQSNVISI 77 (186)
Q Consensus 4 ~~~r~GaGlv~v~~~~~~~~~-----~~-~~~Pe~~v~~~~~~~~~~~~~~~~~~~~~~aivIGpGlg~~~~~~~~~~~~ 77 (186)
.++|.++++|+.+|..-..+. +. ..+| .|.... +++.++++++|+++||+|+. +++..+.+.++
T Consensus 11 ~~~r~~~plv~~itn~v~~~~~an~~l~~Ga~p-~m~~~~--------~e~~~~~~~a~~lvi~~G~~-~~~~~~~~~~~ 80 (272)
T 1ekq_A 11 TAVRRHSPLVHSITNNVVTNFTANGLLALGASP-VMAYAK--------EEVADMAKIAGALVLNIGTL-SKESVEAMIIA 80 (272)
T ss_dssp HHHHHHCCEEEEECCTTTHHHHHHHHHHHTCEE-ECCCCT--------TTHHHHHHHSSEEEEECTTC-CHHHHHHHHHH
T ss_pred HHHHhcCCEEEEecccchhhhhHHHHHHcCCch-hhcCCH--------HHHHHHHHhCCEEEEECCCC-CHHHHHHHHHH
Confidence 468999999999998844433 22 2334 554222 34455667899999999996 45666777788
Q ss_pred HHHHHhcCCCCCEEEecccccccccCc----ccccccCCCeEecCCHHHHhhhcCCC----------h-----HHHHH-H
Q psy9483 78 IHKLKAANLNVPLVIDADGLKLVAEHP----GLIQDYRGPVYLTPNKREYENLLSGS----------E-----VNAAY-I 137 (186)
Q Consensus 78 l~~~~~~~~~~p~VlDadal~~l~~~~----~l~~~~~~~~iiTPh~~E~~rL~~~~----------~-----~~~a~-~ 137 (186)
++.+++. ++|+||||++......+. ++++. ..+.|||||.+|+++|+|.+ + .+.++ +
T Consensus 81 ~~~a~~~--~~pvVlDp~g~~~~~~~~~~~~~ll~~-~~~~vitPN~~E~~~L~g~~~~~~~gvd~~~~~~~~~~aa~~l 157 (272)
T 1ekq_A 81 GKSANEH--GVPVILDPVGAGATPFRTESARDIIRE-VRLAAIRGNAAEIAHTVGVTDWLIKGVDAGEGGGDIIRLAQQA 157 (272)
T ss_dssp HHHHHHT--TCCEEEECTTBTTBHHHHHHHHHHHHH-SCCSEEEECHHHHHHHCC---------------HHHHHHHHHH
T ss_pred HHHHHhc--CCeEEEeCCCcCcccchHHHHHHHHcc-CCCeEECCCHHHHHHHhCCCcccccCccCCCCHHHHHHHHHHH
Confidence 8777667 899999999987655442 33432 25789999999999999853 1 12667 8
Q ss_pred HHhCCCEEEEEeCCeeEEEcCCeEEEEcCCCCCCC-CCChhHHHHhhhc
Q psy9483 138 KQGHPNLTVIVKGHEDVIKNNQISLTCKEGNSWRR-CGGQGDLVAGHRD 185 (186)
Q Consensus 138 a~~~~~~~vvlKG~~~~I~~~~~~~~~~~g~~~la-~~GsGDvLaGiia 185 (186)
++++ +++|++||..++++++++.|.+..+++.+. ++|+||+|+|+++
T Consensus 158 ~~~~-~~vVv~~G~~~~i~~~~~~~~~~~~~~~~~~ttGaGD~lag~ia 205 (272)
T 1ekq_A 158 AQKL-NTVIAITGEVDVIADTSHVYTLHNGHKLLTKVTGAGCLLTSVVG 205 (272)
T ss_dssp HHHH-TSEEEECSSSEEEECSSCEEEECCCCGGGGGSTTHHHHHHHHHH
T ss_pred HHHc-CCEEEEECCCCEEEeCCEEEEEcCCCccccCccCchHHHHHHHH
Confidence 8888 599999999999998888888999999995 9999999999986
No 11
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis}
Probab=99.66 E-value=4.6e-16 Score=128.47 Aligned_cols=167 Identities=16% Similarity=0.110 Sum_probs=106.7
Q ss_pred hhhc----ccceeEEEecCCchhhhhhcCCceEEecccCCC-cchHHHHHHhcccCcEEEEccCCCCCHHHHHHHHHHHH
Q psy9483 5 LQCA----TVTLSIYVCSEGAVPILKNYSPELIVLPHYLDR-NDSVDHIMYWMNRMHSVLIGPGLGTEPLVQSNVISIIH 79 (186)
Q Consensus 5 ~~r~----GaGlv~v~~~~~~~~~~~~~~Pe~~v~~~~~~~-~~~~~~~~~~~~~~~aivIGpGlg~~~~~~~~~~~~l~ 79 (186)
++++ |+|++|++++++.... ..+++...+. +. .+.++++.+.+ ++|++++|+ ++. +++...+.+.+
T Consensus 26 ~~~~~g~~~~~~vt~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~l~~~~-~~d~v~~G~-l~~-~~~~~~~~~~~- 96 (271)
T 2i5b_A 26 TFQEKNVYGMTALTVIVAMDPNNS---WNHQVFPIDT--DTIRAQLATITDGI-GVDAMKTGM-LPT-VDIIELAAKTI- 96 (271)
T ss_dssp HHHHTTCEEEEEEEEEEEEETTTT---TEEEEEECCH--HHHHHHHHHHHHHS-CCSEEEECC-CCS-HHHHHHHHHHH-
T ss_pred HHHHcCCEEeEEeeEEEeEcCCCC---ceeEEEeCCH--HHHHHHHHHHHhCC-CCCEEEECC-CCC-HHHHHHHHHHH-
Confidence 5666 9999999998765431 2344432221 10 01123333333 689999999 875 44444444443
Q ss_pred HHHhcCCCC-CEEEec-----ccccccccCc-ccc--cccCCCeEecCCHHHHhhhcCCC------hH-HHHH-HHHhCC
Q psy9483 80 KLKAANLNV-PLVIDA-----DGLKLVAEHP-GLI--QDYRGPVYLTPNKREYENLLSGS------EV-NAAY-IKQGHP 142 (186)
Q Consensus 80 ~~~~~~~~~-p~VlDa-----dal~~l~~~~-~l~--~~~~~~~iiTPh~~E~~rL~~~~------~~-~~a~-~a~~~~ 142 (186)
++. +. |+|+|| ++..++.... +.+ +..+...|||||..|+++|++.+ +. +.++ +.+..
T Consensus 97 --~~~--~~~~vv~Dp~~~~~~~~~~~~~~~~~~l~~~ll~~~diltpN~~E~~~L~g~~~~~~~~~~~~~a~~l~~~g- 171 (271)
T 2i5b_A 97 --KEK--QLKNVVIDPVMVCKGANEVLYPEHAQALREQLAPLATVITPNLFEASQLSGMDELKTVDDMIEAAKKIHALG- 171 (271)
T ss_dssp --HHT--TCSSEEECCCCSSBCSSSBSSHHHHHHHHHHTGGGCSEECCBHHHHHHHHTCCCCCSHHHHHHHHHHHHTTT-
T ss_pred --HhC--CCCCEEEcCCcCCCCCCcCcCHHHHHHHHHHhHhhCcEEcCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhC-
Confidence 344 66 799996 4544443210 111 12245689999999999999863 22 2566 77766
Q ss_pred CEEEEEeCCe--------eEEEcCCe-EEEEcCCCCCCCCCChhHHHHhhhc
Q psy9483 143 NLTVIVKGHE--------DVIKNNQI-SLTCKEGNSWRRCGGQGDLVAGHRD 185 (186)
Q Consensus 143 ~~~vvlKG~~--------~~I~~~~~-~~~~~~g~~~la~~GsGDvLaGiia 185 (186)
...||+||.. ++++++++ .++.....+.+.++|+||+|+|.++
T Consensus 172 ~~~Vvvt~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~dt~GaGD~f~a~~~ 223 (271)
T 2i5b_A 172 AQYVVITGGGKLKHEKAVDVLYDGETAEVLESEMIDTPYTHGAGCTFSAAVT 223 (271)
T ss_dssp CSEEEEECGGGSCSSSEEEEEECSSCEEEEEECCCCCSCCBTHHHHHHHHHH
T ss_pred CCEEEEcCCCCCCCCceEEEEEeCCeEEEEeccccCCCCCCChHHHHHHHHH
Confidence 4789999877 57777554 5566666778899999999999874
No 12
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae}
Probab=99.63 E-value=5e-16 Score=141.51 Aligned_cols=126 Identities=19% Similarity=0.124 Sum_probs=89.1
Q ss_pred cCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccc-----cccccCc-cccc--ccCCCeEecCCHHHHhh
Q psy9483 54 RMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGL-----KLVAEHP-GLIQ--DYRGPVYLTPNKREYEN 125 (186)
Q Consensus 54 ~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal-----~~l~~~~-~l~~--~~~~~~iiTPh~~E~~r 125 (186)
++|+|.+|++ +.++.+.+.++++..++. ++|+|+||+.. .++..+. +.++ ..+.+.|||||..|+++
T Consensus 91 ~~daIkiG~l---s~~~i~~v~~~l~~~~~~--~~~vVlDPvm~a~~g~~l~~~~~~~~l~~~Ll~~a~iitPN~~Ea~~ 165 (550)
T 3rm5_A 91 KCNVIKTGML---TAAAIEVLHEKLLQLGEN--RPKLVVDPVLVATSGSSLAGKDIVSLITEKVAPFADILTPNIPECYK 165 (550)
T ss_dssp CCSEEEECSC---CHHHHHHHHHHHHHHGGG--SCEEEECCCC---------CTTHHHHHHHHTGGGCSEECCBHHHHHH
T ss_pred CCCEEEECCC---CHHHHHHHHHHHHHhccc--CCCEEEecceecCCCCcCCCHHHHHHHHHHhhCcceEEecCHHHHHH
Confidence 6999999997 677888898888876555 68999999643 3332211 1121 23567999999999999
Q ss_pred hcCCC-------hH-HHHH-HHHhCCCE-EEEEeCCee------------EEE--cCCeE-EEEcCCCCCCCCCChhHHH
Q psy9483 126 LLSGS-------EV-NAAY-IKQGHPNL-TVIVKGHED------------VIK--NNQIS-LTCKEGNSWRRCGGQGDLV 180 (186)
Q Consensus 126 L~~~~-------~~-~~a~-~a~~~~~~-~vvlKG~~~------------~I~--~~~~~-~~~~~g~~~la~~GsGDvL 180 (186)
|+|.+ +. +.++ +++++ .+ .||+||.+. +++ ++++. ++.....+...++||||+|
T Consensus 166 L~g~~~~i~~~~d~~~aa~~L~~~g-~~~~VvvkgG~~~~~g~~~~~~~d~l~~~~~~~~~~~~~~~v~~~~t~GtGD~f 244 (550)
T 3rm5_A 166 LLGEERKVNGLQDIFQIAKDLAKIT-KCSNILVKGGHIPWNDEKEKYITDVLFLGAEQKFIIFKGNFVNTTHTHGTGCTL 244 (550)
T ss_dssp HHSCCCCCCSSHHHHHHHHHHHHHH-CCSCEEEEECC-------CCEEEEEEEETTTTEEEEEEEECCCCSCCBTHHHHH
T ss_pred HhCCCCCCCCHHHHHHHHHHHHHhC-CCCEEEEeCCCCCcccCCCCeEEEEEEEcCCCeEEEEEecCcCCCCCcChhHHH
Confidence 99951 22 3677 88887 45 899999553 566 45554 3555556667899999999
Q ss_pred Hhhhc
Q psy9483 181 AGHRD 185 (186)
Q Consensus 181 aGiia 185 (186)
+|+|+
T Consensus 245 saaia 249 (550)
T 3rm5_A 245 ASAIA 249 (550)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99986
No 13
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2
Probab=99.46 E-value=8.4e-14 Score=113.91 Aligned_cols=160 Identities=20% Similarity=0.286 Sum_probs=95.3
Q ss_pred ccceeEEEecCCchhh--hhhcCCceEEecccCCCcchHHHHHHhcccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCC
Q psy9483 9 TVTLSIYVCSEGAVPI--LKNYSPELIVLPHYLDRNDSVDHIMYWMNRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANL 86 (186)
Q Consensus 9 GaGlv~v~~~~~~~~~--~~~~~Pe~~v~~~~~~~~~~~~~~~~~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~ 86 (186)
|+|+++++++++.... +....||.|. +.++++.+.+ +++++.+|+ ++ +++....+.+.+ ++.
T Consensus 32 g~~~vt~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~-~~~~v~~G~-l~-~~~~~~~~~~~~---~~~-- 95 (258)
T 1ub0_A 32 GTSALTLVTAQNTLGVQRVHLLPPEVVY--------AQIESVAQDF-PLHAAKTGA-LG-DAAIVEAVAEAV---RRF-- 95 (258)
T ss_dssp EEEEEEEEEEEETTEEEEEEECCHHHHH--------HHHHHHHHHS-CCSEEEECC-CC-SHHHHHHHHHHH---HHT--
T ss_pred EeEeeeEEEeecCCceeEEEeCCHHHHH--------HHHHHHHcCC-CCCEEEECC-cC-CHHHHHHHHHHH---HhC--
Confidence 9999999998765432 1222222211 1122222222 479999998 66 554544444444 344
Q ss_pred C-CCEEEec-----ccccccccC-cccc-c-ccCCCeEecCCHHHHhhhcCC--C---hH-HHHH-HHHhCCCEEEEEeC
Q psy9483 87 N-VPLVIDA-----DGLKLVAEH-PGLI-Q-DYRGPVYLTPNKREYENLLSG--S---EV-NAAY-IKQGHPNLTVIVKG 150 (186)
Q Consensus 87 ~-~p~VlDa-----dal~~l~~~-~~l~-~-~~~~~~iiTPh~~E~~rL~~~--~---~~-~~a~-~a~~~~~~~vvlKG 150 (186)
+ +|+|+|| ++..++... .+.+ . ..+...|||||..|+++|++. + +. +.++ +.+ ++...|++|+
T Consensus 96 ~~~~vv~Dp~~~~~~g~~l~~~~~~~~~~~~ll~~~dil~pN~~E~~~L~g~~~~~~~~~~~~a~~l~~-~g~~~vvvt~ 174 (258)
T 1ub0_A 96 GVRPLVVDPVMVAKSGDPLLAKEAAAALKERLFPLADLVTPNRLEAEALLGRPIRTLKEAEEAAKALLA-LGPKAVLLKG 174 (258)
T ss_dssp TCCSEEECCCC---------CHHHHHHHHHHTGGGCSEECCBHHHHHHHHCSCCCSHHHHHHHHHHHHT-TSCSCEEEEE
T ss_pred CCCcEEECCeeecCCCCcccChHHHHHHHHhhcccCeEEeCCHHHHHHHhCCCCCCHHHHHHHHHHHHH-cCCCEEEEcc
Confidence 6 7999998 565444421 0111 1 123468999999999999997 2 22 2556 666 4324788887
Q ss_pred Ce-------eEEEcCCeE-EEEcCCCCCCCCCChhHHHHhhhc
Q psy9483 151 HE-------DVIKNNQIS-LTCKEGNSWRRCGGQGDLVAGHRD 185 (186)
Q Consensus 151 ~~-------~~I~~~~~~-~~~~~g~~~la~~GsGDvLaGiia 185 (186)
.. ++++++++. ++.....+...++|+||+|+|.++
T Consensus 175 g~~~G~~~~~~~~~~~~~~~~~~~~~~~~dt~GaGD~f~a~~~ 217 (258)
T 1ub0_A 175 GHLEGEEAVDLLATRGGVLRFSAPRVHTRNTHGTGCTLSAAIA 217 (258)
T ss_dssp EECC---EEEEEEETTEEEEEEECCCCCSCCTTHHHHHHHHHH
T ss_pred CCCCCCceEEEEEeCCeEEEEeccccCCCCCCChHHHHHHHHH
Confidence 64 467776654 445556667789999999999764
No 14
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A*
Probab=99.42 E-value=2e-13 Score=114.10 Aligned_cols=160 Identities=18% Similarity=0.190 Sum_probs=93.3
Q ss_pred cccceeEEEecCCchhhhhhcCCceEEecccCCCcchH-HHHHHhcc--cCcEEEEccCCCCCHHHHHHHHHHHHHHHhc
Q psy9483 8 ATVTLSIYVCSEGAVPILKNYSPELIVLPHYLDRNDSV-DHIMYWMN--RMHSVLIGPGLGTEPLVQSNVISIIHKLKAA 84 (186)
Q Consensus 8 ~GaGlv~v~~~~~~~~~~~~~~Pe~~v~~~~~~~~~~~-~~~~~~~~--~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~ 84 (186)
.|++++++.++++.... ++. ..+ + ++.+ +++.++++ ++|++++|+ ++ +.++...+ ++.+++.
T Consensus 55 ~g~~~it~~~~~n~~~~-----~~~--~~~--~-~~~~~~~~~~l~~~~~~~~v~~G~-l~-~~~~~~~~---~~~~~~~ 119 (288)
T 1jxh_A 55 YGCSVITALVAENTCGV-----QSV--YRI--E-PDFVAAQLDSVFSDVRIDTTKIGM-LA-ETDIVEAV---AERLQRH 119 (288)
T ss_dssp EEEEEEEEEEEEETTEE-----EEE--EEC--C-HHHHHHHHHHHHTTSCCSEEEECC-CC-SHHHHHHH---HHHHHHT
T ss_pred EEeEEeeEEEeecCCCe-----eee--eeC--C-HHHHHHHHHHHHhCCCCCEEEECC-CC-CHHHHHHH---HHHHHHC
Confidence 89999999987654221 111 121 1 1111 22223333 379999998 65 44444433 3334444
Q ss_pred CCCC-CEEEec-----ccccccccCc-c-ccc-ccCCCeEecCCHHHHhhhcCC-C-----hH-HHHH-HHHhCCCEEEE
Q psy9483 85 NLNV-PLVIDA-----DGLKLVAEHP-G-LIQ-DYRGPVYLTPNKREYENLLSG-S-----EV-NAAY-IKQGHPNLTVI 147 (186)
Q Consensus 85 ~~~~-p~VlDa-----dal~~l~~~~-~-l~~-~~~~~~iiTPh~~E~~rL~~~-~-----~~-~~a~-~a~~~~~~~vv 147 (186)
+. |+|+|| ++..++.... + +.. ..+...|||||..|+++|++. + +. +.++ +.+.. ...||
T Consensus 120 --~~~~vvlDp~~~~~~g~~l~~~~~~~~l~~~ll~~~dil~pN~~Ea~~L~g~~~~~~~~~~~~~a~~l~~~g-~~~Vv 196 (288)
T 1jxh_A 120 --HVRNVVLDTVMLAKSGDPLLSPSAIETLRVRLLPQVSLITPNLPEAAALLDAPHARTEQEMLAQGRALLAMG-CEAVL 196 (288)
T ss_dssp --TCCSEEEECCCC------CCCHHHHHHHHHHTGGGCSEEECBHHHHHHHHTCCCCCSHHHHHHHHHHHHHTT-CSEEE
T ss_pred --CCCeEEEcCcccCCCCCccCCHHHHHHHHHHHHhhCcEEcCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhC-CCEEE
Confidence 66 499995 4444443210 1 111 134568999999999999985 2 22 2566 77766 47899
Q ss_pred EeCCe-------eEEEcCCeE-EEEcCCCCCCCCCChhHHHHhhhc
Q psy9483 148 VKGHE-------DVIKNNQIS-LTCKEGNSWRRCGGQGDLVAGHRD 185 (186)
Q Consensus 148 lKG~~-------~~I~~~~~~-~~~~~g~~~la~~GsGDvLaGiia 185 (186)
+|+.. ++++++++. ++.....+...+.|+||+|+|.++
T Consensus 197 vt~G~~G~~~~~~~~~~~~~~~~~~~~~~~~vdttGAGD~f~a~~~ 242 (288)
T 1jxh_A 197 MKGGHLEDAQSPDWLFTREGEQRFSAPRVNTKNTHGTGCTLSAALA 242 (288)
T ss_dssp EBC---------CEEECSSCEEEC---CCCCSCCBTHHHHHHHHHH
T ss_pred EeccCCCCCceeEEEEECCeEEEEeccccCCCCCCCchHHHHHHHH
Confidence 99876 778776654 444445667789999999999874
No 15
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A*
Probab=99.27 E-value=7.7e-12 Score=104.84 Aligned_cols=165 Identities=12% Similarity=0.043 Sum_probs=98.7
Q ss_pred cccceeEEEecCCchhhhhhcCCceEEecccCCC-cchHHHHHHhcccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCC
Q psy9483 8 ATVTLSIYVCSEGAVPILKNYSPELIVLPHYLDR-NDSVDHIMYWMNRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANL 86 (186)
Q Consensus 8 ~GaGlv~v~~~~~~~~~~~~~~Pe~~v~~~~~~~-~~~~~~~~~~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~ 86 (186)
.|+.++|+++.++....- .....+.+ +. ...++.+...--.+|++.+|+ ++ +.++.+.+.++++.. .
T Consensus 33 ~~~~v~Ta~~sq~t~g~~-----~~~~~~~~-~~~~~~~~~~~~~d~~~daik~G~-l~-s~~~i~~v~~~l~~~--~-- 100 (282)
T 3h74_A 33 DVAALPTSLLSTHTSGYG-----TPAVVDLS-TWLPQVFAHWTRAQLHFDQALIGY-VG-SVALCQQITTYLEQQ--T-- 100 (282)
T ss_dssp EEEEEEEEEEEECSSSSS-----SCCEECCT-TTHHHHHHHHHHTTCCCSEEEECC-CC-SHHHHHHHHHHHHHS--C--
T ss_pred eeeeEEEEEeeEcCCCcc-----eeeeecCh-HHHHHHHHHHHHcCCccCEEEECC-CC-CHHHHHHHHHHHHHC--C--
Confidence 367788888888764321 11111210 10 011222221112699999988 44 567778788887653 2
Q ss_pred CCCEEEecccc-----c-ccccCc-c-cccccCCCeEecCCHHHHhhhcCC-----ChH-HHHH-HHHhCCC-EEEEEeC
Q psy9483 87 NVPLVIDADGL-----K-LVAEHP-G-LIQDYRGPVYLTPNKREYENLLSG-----SEV-NAAY-IKQGHPN-LTVIVKG 150 (186)
Q Consensus 87 ~~p~VlDadal-----~-~l~~~~-~-l~~~~~~~~iiTPh~~E~~rL~~~-----~~~-~~a~-~a~~~~~-~~vvlKG 150 (186)
+.|+|+||.-. . ++..+. + +.+..+...|||||..|+++|++. ++. +.++ +.++++- ..|++||
T Consensus 101 ~~~vv~DPv~~~~g~l~~l~~~~~~~~l~~ll~~adiitpN~~Ea~~L~g~~~~~~~~~~~aa~~L~~~~g~~~~Vvvt~ 180 (282)
T 3h74_A 101 LSLLVVDPVLGDLGQLYQGFDQDYVAAMRQLIQQADVILPNTTEAALLTGAPYQVTPDLEVILPALQAQLKTGAHAVITD 180 (282)
T ss_dssp CSEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCCHHHHHHHHTCCCCSSCCHHHHHHHHHTTSCTTCEECEEE
T ss_pred CCcEEEcCeeecCCCCCCCCCHHHHHHHHHHhccCCEECCCHHHHHHHhCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 57899999433 2 122111 1 112235669999999999999997 133 3667 8775742 3899999
Q ss_pred Ce-----eE-EEc-CCeE-EEEcCCCCCCCCCChhHHHHhhhc
Q psy9483 151 HE-----DV-IKN-NQIS-LTCKEGNSWRRCGGQGDLVAGHRD 185 (186)
Q Consensus 151 ~~-----~~-I~~-~~~~-~~~~~g~~~la~~GsGDvLaGiia 185 (186)
.+ +. +++ +++. ++.....+ ..++|+||+|++.++
T Consensus 181 G~~~~~~g~~~~~~~~~~~~~~~~~v~-~dt~GaGD~fsaai~ 222 (282)
T 3h74_A 181 VQRADQIGCAWLDEAGHVQYCGARRLP-GHYNGTGDTLAAVIA 222 (282)
T ss_dssp EEETTEEEEEEECTTSCEEEEEEECCS-SCCTTHHHHHHHHHH
T ss_pred cCCCCceEEEEEeCCCeEEEEEecCCC-CCCcCHHHHHHHHHH
Confidence 53 44 453 5544 33333333 679999999999875
No 16
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=99.18 E-value=8.3e-11 Score=98.44 Aligned_cols=130 Identities=21% Similarity=0.211 Sum_probs=85.7
Q ss_pred ccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEec-----ccccccccCc-cccc--ccCCCeEecCCHHHHh
Q psy9483 53 NRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDA-----DGLKLVAEHP-GLIQ--DYRGPVYLTPNKREYE 124 (186)
Q Consensus 53 ~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDa-----dal~~l~~~~-~l~~--~~~~~~iiTPh~~E~~ 124 (186)
.++|++++|+ ++ +.+..+.+.++++.+++.+++.++|+|| ++..++.... +.++ ..+.+.|||||..|++
T Consensus 76 ~~~d~v~~G~-l~-~~~~~~~v~~~l~~~~~~~~~~~vv~DPVm~~~~~~~~~~~~~~~~l~~~ll~~~diitpN~~E~~ 153 (289)
T 3pzs_A 76 KDCDAVLSGY-IG-SPEQGSHILAAVAQVKQANPDAWYFCDPVMGHPEKGCIVAPGVAEFFCNEALPASDMIAPNLLELE 153 (289)
T ss_dssp GGCCEEEECC-CS-SHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSCHHHHHHHHHTHHHHCSEECCCHHHHH
T ss_pred cCCCEEEECC-CC-CHHHHHHHHHHHHHHHhhCCCCeEEEcCccccCCCCcccCHHHHHHHHHHhhccCCEEeCCHHHHH
Confidence 4799999988 66 5667788888888776652237899996 3333333211 1111 1245689999999999
Q ss_pred hhcCC--C---hH-HHHH-HHHhCCCEEEEEeCC-ee---------EEEcCCeEEEEc-CCCCC--CCCCChhHHHHhhh
Q psy9483 125 NLLSG--S---EV-NAAY-IKQGHPNLTVIVKGH-ED---------VIKNNQISLTCK-EGNSW--RRCGGQGDLVAGHR 184 (186)
Q Consensus 125 rL~~~--~---~~-~~a~-~a~~~~~~~vvlKG~-~~---------~I~~~~~~~~~~-~g~~~--la~~GsGDvLaGii 184 (186)
+|+|. + +. ++++ +.+.. ...|++||. .+ +++++++.+... ...+. ..++|+||+|++.+
T Consensus 154 ~L~g~~~~~~~~~~~aa~~l~~~g-~~~Vvvt~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dt~GaGD~f~a~~ 232 (289)
T 3pzs_A 154 QLSGERVENVEQAVQVARSLCARG-PKVVLVKHLSRAGYHADCFEMLLVTADDAWHICRPLVDFGKRQPVGVGDLTSGLL 232 (289)
T ss_dssp HHHTSCCCSHHHHHHHHHHHHTTS-CSEEEECCCGGGSSCTTEEEEEEECSSCEEEEEEECCCCTTSCCTTHHHHHHHHH
T ss_pred HHhCCCCCCHHHHHHHHHHHHHHC-CCEEEEecccCCCCCCCeEEEEEEeCCeEEEEEeeeecCCCCCCCcHHHHHHHHH
Confidence 99997 2 22 2566 76666 478999973 22 666666554433 23333 45999999999886
Q ss_pred c
Q psy9483 185 D 185 (186)
Q Consensus 185 a 185 (186)
+
T Consensus 233 ~ 233 (289)
T 3pzs_A 233 L 233 (289)
T ss_dssp H
T ss_pred H
Confidence 4
No 17
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A*
Probab=99.17 E-value=6.3e-11 Score=99.60 Aligned_cols=126 Identities=17% Similarity=0.114 Sum_probs=83.1
Q ss_pred cCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccc--c-c-cCcc---cc-cccCCCeEecCCHHHHhh
Q psy9483 54 RMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKL--V-A-EHPG---LI-QDYRGPVYLTPNKREYEN 125 (186)
Q Consensus 54 ~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~--l-~-~~~~---l~-~~~~~~~iiTPh~~E~~r 125 (186)
.+|+|.+|+ ++ +.+..+.+.++++.+++. +.|+|+||.-... + . ..++ .+ +..+...|||||..|++.
T Consensus 77 ~~~aik~G~-l~-s~~~i~~v~~~l~~~~~~--~~~vv~DPv~~~~g~l~~~~~~~~~~~~~~ll~~adiitpN~~Ea~~ 152 (291)
T 3mbh_A 77 QFDAIYTGY-LG-SPRQIQIVSDFIKDFRQP--DSLIVADPVLGDNGRLYTNFDMEMVKEMRHLITKADVITPNLTELFY 152 (291)
T ss_dssp CCSEEEECC-CS-STTHHHHHHHHHHHHCCT--TCEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCBHHHHHH
T ss_pred ccCEEEECC-CC-CHHHHHHHHHHHHHhcCC--CCcEEECceeeeCCCCCCCCCHHHHHHHHHHhccCCEEeCCHHHHHH
Confidence 699999988 65 455777788888776433 5799999954421 1 1 0111 11 123457999999999999
Q ss_pred hcCCC--------hH-HHHH-HHHhCCCEEEEEeCCe--------e-EEEcC--CeEE-EEcCCCCCCCCCChhHHHHhh
Q psy9483 126 LLSGS--------EV-NAAY-IKQGHPNLTVIVKGHE--------D-VIKNN--QISL-TCKEGNSWRRCGGQGDLVAGH 183 (186)
Q Consensus 126 L~~~~--------~~-~~a~-~a~~~~~~~vvlKG~~--------~-~I~~~--~~~~-~~~~g~~~la~~GsGDvLaGi 183 (186)
|+|.+ +. ++++ +.+.. ...|++||.+ . +++++ ++.+ +.....+ ..++|+||+|++.
T Consensus 153 L~g~~~~~~~~~~~~~~aa~~L~~~g-~~~Vvvtgg~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~-~dt~GaGD~f~aa 230 (291)
T 3mbh_A 153 LLDEPYKADSTDEELKEYLRLLSDKG-PQVVIITSVPVHDEPHKTSVYAYNRQGNRYWKVTCPYLP-AHYPGTGDTFTSV 230 (291)
T ss_dssp HHTCCCCSCCCHHHHHHHHHHHHHTS-CSEEEEEEEEETTEEEEEEEEEEETTTTEEEEEEESCCG-GGSTTHHHHHHHH
T ss_pred HhCCCCCCCCCHHHHHHHHHHHHhhC-CCEEEEEeccccCCCCcEEEEEEeCCCCeEEEEEecccC-CCCCChHHHHHHH
Confidence 99962 12 2566 77766 4789999654 2 55554 3443 3332332 4699999999998
Q ss_pred hc
Q psy9483 184 RD 185 (186)
Q Consensus 184 ia 185 (186)
++
T Consensus 231 i~ 232 (291)
T 3mbh_A 231 IT 232 (291)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 18
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A*
Probab=99.14 E-value=3.3e-10 Score=93.83 Aligned_cols=129 Identities=19% Similarity=0.139 Sum_probs=82.3
Q ss_pred hcccCcEEEEccCCCCCHHHHHHHHHHHHHHHh--cCCCCCEEEecccc-----cccccC-cc-ccc-ccCCCeEecCCH
Q psy9483 51 WMNRMHSVLIGPGLGTEPLVQSNVISIIHKLKA--ANLNVPLVIDADGL-----KLVAEH-PG-LIQ-DYRGPVYLTPNK 120 (186)
Q Consensus 51 ~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~--~~~~~p~VlDadal-----~~l~~~-~~-l~~-~~~~~~iiTPh~ 120 (186)
.++.++++++|+ ++. .+..+.+.++++.+++ . ++|+|+|+.-. ..+... .+ +.. ..+.+.|||||.
T Consensus 85 ~~~~~~~v~~G~-l~~-~~~~~~~~~~l~~a~~~~~--g~~vv~Dp~~~~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~ 160 (283)
T 2ddm_A 85 ALRQLRAVTTGY-MGT-ASQIKILAEWLTALRKDHP--DLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNI 160 (283)
T ss_dssp CCTTCCEEEECC-CSC-HHHHHHHHHHHHHHHTTCT--TCEEEECCCCEETTTEECSCTTHHHHHHHTTGGGCSEECCBH
T ss_pred CcccCCEEEECC-cCC-HHHHHHHHHHHHHHHhcCC--CCeEEECCcccCCCCCcccCHHHHHHHHHhhhhhceEecCCH
Confidence 345789999987 654 4456777788877665 4 68999996422 112211 11 111 124568999999
Q ss_pred HHHhhhcCC--C---hH-HHHH-HHHhCCCEEEEEeCCee---------EEEcCCeEE-EEcCCCCCCCCCChhHHHHhh
Q psy9483 121 REYENLLSG--S---EV-NAAY-IKQGHPNLTVIVKGHED---------VIKNNQISL-TCKEGNSWRRCGGQGDLVAGH 183 (186)
Q Consensus 121 ~E~~rL~~~--~---~~-~~a~-~a~~~~~~~vvlKG~~~---------~I~~~~~~~-~~~~g~~~la~~GsGDvLaGi 183 (186)
.|+++|++. + +. +.++ +.+.. ...||+|+... +++++++.+ +.....+ ..++|+||+|+|.
T Consensus 161 ~E~~~L~g~~~~~~~~~~~~a~~l~~~g-~~~Vvvt~G~~~~~~~~~G~~~~~~~~~~~~~~~~v~-vdt~GAGDaf~a~ 238 (283)
T 2ddm_A 161 FELEILTGKNCRDLDSAIAAAKSLLSDT-LKWVVVTSASGNEENQEMQVVVVTADSVNVISHSRVK-TDLKGTGDLFCAQ 238 (283)
T ss_dssp HHHHHHHTSCCSSHHHHHHHHHHHCCSS-CCEEEEEC-------CEEEEEEEETTEEEEEEEECCC-CCCCCHHHHHHHH
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHcC-CCEEEEccccCccCCCceeEEEEeCCceEEEeeceeC-CCCCChHHHHHHH
Confidence 999999997 2 22 2455 66555 46889997543 666666544 3333333 6789999999987
Q ss_pred hc
Q psy9483 184 RD 185 (186)
Q Consensus 184 ia 185 (186)
++
T Consensus 239 ~~ 240 (283)
T 2ddm_A 239 LI 240 (283)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 19
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei}
Probab=99.01 E-value=1.3e-09 Score=92.02 Aligned_cols=129 Identities=14% Similarity=0.098 Sum_probs=79.9
Q ss_pred ccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCC----CCEEEeccccc---ccccCc--cccc-ccCCCeEecCCHHH
Q psy9483 53 NRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLN----VPLVIDADGLK---LVAEHP--GLIQ-DYRGPVYLTPNKRE 122 (186)
Q Consensus 53 ~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~----~p~VlDadal~---~l~~~~--~l~~-~~~~~~iiTPh~~E 122 (186)
.++|+|.+|+ ++ +.+..+.+.++++.+++.+++ .++|+||.-.. ++.... +.++ ..+...|||||..|
T Consensus 75 ~~~daV~tG~-l~-s~~~i~~v~~~l~~~k~~~~~~~~~~~vv~DPVm~d~G~~~~~~~~~~~~~~Ll~~adiitPN~~E 152 (300)
T 3zs7_A 75 SNYRYILTGY-IN-NVDIIGRIRDTLKEVRELREKEDKKLTFICDPVMGDDGIMYCKKEVLDAYRELVPLADIVTPNYFE 152 (300)
T ss_dssp GGCSEEEECC-CC-CHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCC---------CTHHHHHHHHGGGCSEECCCHHH
T ss_pred ccCCEEEECC-CC-CHHHHHHHHHHHHHHHhhCcCcCCCceEEEccccccCCCeecCHHHHHHHHHHhhhCCEecCCHHH
Confidence 3689999988 77 466778888888777544101 68999993221 221111 1111 23456999999999
Q ss_pred HhhhcCC--C---hH-HHHH-HHHhCCCEEEEEeCCee--------EEEc-C------CeEEEEc-CCCCCCCCCChhHH
Q psy9483 123 YENLLSG--S---EV-NAAY-IKQGHPNLTVIVKGHED--------VIKN-N------QISLTCK-EGNSWRRCGGQGDL 179 (186)
Q Consensus 123 ~~rL~~~--~---~~-~~a~-~a~~~~~~~vvlKG~~~--------~I~~-~------~~~~~~~-~g~~~la~~GsGDv 179 (186)
++.|+|. . +. ++++ +.+... ..|++||.+. +++. . ++.+... ..-+. .+.|+||+
T Consensus 153 a~~L~g~~~~~~~~~~~aa~~L~~~G~-~~Vvvt~g~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~-~~~GtGD~ 230 (300)
T 3zs7_A 153 ASLLSGVTVNDLSSAILAADWFHNCGV-AHVIIKSFREQENPTHLRFLYSVKEGSEAAVRRFSGVVPYHEG-RYTGTGDV 230 (300)
T ss_dssp HHHHHSSCCCSHHHHHHHHHHHHHHTC-SEEEEEEEC---CCSEEEEEEEECCSTTSCCEEEEEEEECCSS-CBTTHHHH
T ss_pred HHHHhCCCCCCHHHHHHHHHHHHHhCC-CEEEEecCcCCCCCceEEEEEeccccccCCCeEEEEEeccCCC-CCcCHHHH
Confidence 9999997 2 22 2566 777663 6788887542 3332 3 3443332 22333 57899999
Q ss_pred HHhhhc
Q psy9483 180 VAGHRD 185 (186)
Q Consensus 180 LaGiia 185 (186)
|++.++
T Consensus 231 fsaal~ 236 (300)
T 3zs7_A 231 FAACLL 236 (300)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999875
No 20
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A*
Probab=98.50 E-value=9.2e-07 Score=73.53 Aligned_cols=122 Identities=15% Similarity=0.087 Sum_probs=78.2
Q ss_pred HhcccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCcccccccCCCeEecCCHHHHhhhcCC
Q psy9483 50 YWMNRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHPGLIQDYRGPVYLTPNKREYENLLSG 129 (186)
Q Consensus 50 ~~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~~l~~~~~~~~iiTPh~~E~~rL~~~ 129 (186)
+.++.+|.+++...+. . +.+..+++.+++. +.|+++|+.....+ ..++ .+.+.+++||..|+..|++.
T Consensus 130 ~~~~~~~~v~~~~~~~--~---~~~~~~~~~a~~~--g~~v~~D~~~~~~~--~~~l---l~~~dil~~N~~E~~~l~g~ 197 (309)
T 1rkd_A 130 ERIANASALLMQLESP--L---ESVMAAAKIAHQN--KTIVALNPAPAREL--PDEL---LALVDIITPNETEAEKLTGI 197 (309)
T ss_dssp HHHHHCSEEEECSSSC--H---HHHHHHHHHHHHT--TCEEEECCCSCCCC--CHHH---HTTCSEECCCHHHHHHHHSC
T ss_pred HhcccCCEEEEeCCCC--H---HHHHHHHHHHHHc--CCEEEEECCccccc--hHHH---HhhCCEEEcCHHHHHHHhCC
Confidence 3456799999975432 2 2344555555566 78999999875211 1122 24568999999999999997
Q ss_pred --C---hH-HHHH-HHHhCCCEEEEEe-CCee-EEEcCCeEEEEcCCC-CCCCCCChhHHHHhhh
Q psy9483 130 --S---EV-NAAY-IKQGHPNLTVIVK-GHED-VIKNNQISLTCKEGN-SWRRCGGQGDLVAGHR 184 (186)
Q Consensus 130 --~---~~-~~a~-~a~~~~~~~vvlK-G~~~-~I~~~~~~~~~~~g~-~~la~~GsGDvLaGii 184 (186)
+ +. +.++ +.+... ..|++| |+.. +++++++.+...... ....+.|+||.++|.+
T Consensus 198 ~~~~~~~~~~~~~~l~~~g~-~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vdt~GAGD~f~a~~ 261 (309)
T 1rkd_A 198 RVENDEDAAKAAQVLHEKGI-RTVLITLGSRGVWASVNGEGQRVPGFRVQAVDTIAAGDTFNGAL 261 (309)
T ss_dssp CCSSHHHHHHHHHHHHHTTC-SEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCC-CEEEEEECCCcEEEEeCCceEEcCCCCCCcCCCCChHHHHHHHH
Confidence 1 22 2555 666542 466666 5543 445666655554433 2346999999999865
No 21
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus}
Probab=98.48 E-value=1.7e-06 Score=71.63 Aligned_cols=124 Identities=17% Similarity=0.044 Sum_probs=78.9
Q ss_pred HHHhcccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCcccccccCCCeEecCCHHHHhhhc
Q psy9483 48 IMYWMNRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHPGLIQDYRGPVYLTPNKREYENLL 127 (186)
Q Consensus 48 ~~~~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~~l~~~~~~~~iiTPh~~E~~rL~ 127 (186)
+.+.++.+|.+++.... .. +.+.++++.+++. ++++++|+....- ...++ .+.+.+++||..|+..|+
T Consensus 127 ~~~~~~~~~~v~~~~~~--~~---~~~~~~~~~a~~~--~~~v~~D~~~~~~--~~~~l---l~~~dil~~N~~E~~~l~ 194 (304)
T 3ry7_A 127 AKDAIINADFVVAQLEV--PI---PAIISAFEIAKAH--GVTTVLNPAPAKA--LPNEL---LSLIDIIVPNETEAELLS 194 (304)
T ss_dssp THHHHHTCSEEEEETTS--CH---HHHHHHHHHHHHT--TCEEEEECCSCCC--CCHHH---HTTCSEECCBHHHHHHHH
T ss_pred HHHHhccCCEEEEcCCC--CH---HHHHHHHHHHHHc--CCEEEEeCCcccc--ccHHH---HHhCCEEecCHHHHHHHh
Confidence 33456789999998643 22 3344555555556 7899999965421 11122 345799999999999999
Q ss_pred CC--C---hH-HHHH-HHHhCCCEEEEEeCCe--eEEEcCCeEEEEcCCC-CCCCCCChhHHHHhhh
Q psy9483 128 SG--S---EV-NAAY-IKQGHPNLTVIVKGHE--DVIKNNQISLTCKEGN-SWRRCGGQGDLVAGHR 184 (186)
Q Consensus 128 ~~--~---~~-~~a~-~a~~~~~~~vvlKG~~--~~I~~~~~~~~~~~g~-~~la~~GsGDvLaGii 184 (186)
+. + +. +.++ +.+... ..|++|... .+++++++.+...... +...+.|+||.++|.+
T Consensus 195 g~~~~~~~~~~~~~~~l~~~g~-~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~ 260 (304)
T 3ry7_A 195 GIKVTNEQSMKDNANYFLSIGI-KTVLITLGKQGTYFATKNQSQHIEAYKVNAIDTTAAGDTFIGAF 260 (304)
T ss_dssp SCCCCSHHHHHHHHHHHHHTTC-CEEEEECGGGCEEEECSSCEEEECCSSCCSSCCSSHHHHHHHHH
T ss_pred CCCCCChhHHHHHHHHHHHcCC-CEEEEEeCCCceEEEECCeeEEecCCCcccCCCCCchHHHHHHH
Confidence 97 1 22 2556 665543 466666543 3555666665555433 2346999999998865
No 22
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.46 E-value=4.9e-07 Score=74.65 Aligned_cols=133 Identities=9% Similarity=0.089 Sum_probs=81.3
Q ss_pred HHHhcccCcEEEEccCCC-CCHHHHHHHHHHHHHHHh-cCCCCCEEEecccccccccCccccc-ccCCCeEecCCHHHHh
Q psy9483 48 IMYWMNRMHSVLIGPGLG-TEPLVQSNVISIIHKLKA-ANLNVPLVIDADGLKLVAEHPGLIQ-DYRGPVYLTPNKREYE 124 (186)
Q Consensus 48 ~~~~~~~~~aivIGpGlg-~~~~~~~~~~~~l~~~~~-~~~~~p~VlDadal~~l~~~~~l~~-~~~~~~iiTPh~~E~~ 124 (186)
..+.++.+|.+.+|. +. ..+...+.+.++++.+++ . +.++++|+.....+- ..+.++ ..+...+++||..|+.
T Consensus 108 ~~~~~~~~~~v~~g~-~~~~~~~~~~~~~~~~~~a~~~~--~~~v~~D~~~~~~~~-~~~~~~~~l~~~dil~~N~~E~~ 183 (296)
T 2qhp_A 108 LKRLALNTRAVCFGS-LAQRNEVSRATINRFLDTMPDID--GQLKIFDINLRQDFY-TKEVLRESFKRCNILKINDEELV 183 (296)
T ss_dssp HHHHHHTEEEEEECS-GGGSSHHHHHHHHHHHHHSCCTT--SCEEEEECCCCTTCC-CHHHHHHHHHHCSEEEEEHHHHH
T ss_pred hHhhhcCCCEEEECC-hHhcChHHHHHHHHHHHHHHhcC--CCEEEEECcCCcccc-CHHHHHHHHHHCCEEECCHHHHH
Confidence 344567899999986 43 234455667777776544 3 678999996432111 111111 1234689999999999
Q ss_pred hhcCC-----ChH-HHHH-HHHhCCCEEEEEe-CCe-eEEEcCCeEEEEcCC-CCCCCCCChhHHHHhhh
Q psy9483 125 NLLSG-----SEV-NAAY-IKQGHPNLTVIVK-GHE-DVIKNNQISLTCKEG-NSWRRCGGQGDLVAGHR 184 (186)
Q Consensus 125 rL~~~-----~~~-~~a~-~a~~~~~~~vvlK-G~~-~~I~~~~~~~~~~~g-~~~la~~GsGDvLaGii 184 (186)
.|++. ++. +.++ +.++++-..|++| |+. .+++++++.+....- .....+.|+||.++|.+
T Consensus 184 ~l~g~~~~~~~~~~~~~~~l~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGD~f~a~~ 253 (296)
T 2qhp_A 184 TISRMFGYPGIDLQDKCWILLAKYNLKMLILTCGINGSYVFTPGVVSFQETPKVPVADTVGAGDSFTAAF 253 (296)
T ss_dssp HHHHHTTCTTSCHHHHHHHHHHHTTCSEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHH
T ss_pred HHhcccCCCCCCHHHHHHHHHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCccccCCCchHHHHHHH
Confidence 99873 223 3566 7776422355554 543 345566665555432 23346999999999765
No 23
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}
Probab=98.42 E-value=6.6e-07 Score=75.66 Aligned_cols=134 Identities=10% Similarity=-0.061 Sum_probs=82.0
Q ss_pred HHhcccCcEEEEc-cCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccC------cccc-cccCCCeEecCCH
Q psy9483 49 MYWMNRMHSVLIG-PGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEH------PGLI-QDYRGPVYLTPNK 120 (186)
Q Consensus 49 ~~~~~~~~aivIG-pGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~------~~l~-~~~~~~~iiTPh~ 120 (186)
.+.++.+|.++++ .-+..++...+.+.++++.+++. ++++++|+.--..+-.. .+.+ +..+...||+||.
T Consensus 124 ~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~r~~~~~~~~~~~~~~~~~~ll~~~dil~~N~ 201 (346)
T 3ktn_A 124 EAFLAEVDMVHICGISLSLTEKTRDAALILAQKAHAY--QKKVCFDFNYRPSLNTANSALFMRQQYERILPYCDIVFGSR 201 (346)
T ss_dssp HHHHTTCSEEEECTHHHHHCHHHHHHHHHHHHHHHHT--TCEEEEECCCCGGGCCHHHHHHHHHHHHHHGGGCSEEECCH
T ss_pred HHHhCCCCEEEEeCccccCCHHHHHHHHHHHHHHHHc--CCEEEEeCCCChHHcCCccHHHHHHHHHHHHHhCCEEEccH
Confidence 3456789999995 21112455556777788777777 78999999522111110 0111 1234569999999
Q ss_pred HHHhhhcCCC---------hH-HHHH-HHHhCCCEEEEEe-CCe--------eEEEcCCeEEEEcCC-CCCCCCCChhHH
Q psy9483 121 REYENLLSGS---------EV-NAAY-IKQGHPNLTVIVK-GHE--------DVIKNNQISLTCKEG-NSWRRCGGQGDL 179 (186)
Q Consensus 121 ~E~~rL~~~~---------~~-~~a~-~a~~~~~~~vvlK-G~~--------~~I~~~~~~~~~~~g-~~~la~~GsGDv 179 (186)
.|+..|++.+ +. +.++ +.++++-..||+| |.. .+++++++.+....- .+.--+.|+||.
T Consensus 202 ~E~~~l~g~~~~~~~~~~~~~~~~~~~l~~~~g~~~vvvT~G~~G~~~~~~g~~~~~~~~~~~~~~~~v~vvdttGAGDa 281 (346)
T 3ktn_A 202 RDLVELLGFIPREDLEGEAQETELIQRFMSQYNLEWFAGTTRSHSQNQNYLSGYLYTQNEYQQSEKRPLLNLDRIGAGDA 281 (346)
T ss_dssp HHHHHTSCCCCCTTSCHHHHHHHHHHHHHHHHTCSEEEEEEEEECSSCEEEEEEEECSSCEEECCCEECCCSCCTTHHHH
T ss_pred HHHHHHhCCCCCccccchHHHHHHHHHHHHhcCCCEEEEecCccccccCcceEEEEECCceEEeCCCccccCCCCchhHH
Confidence 9999999874 12 2555 6665322355665 554 456666655444322 223469999999
Q ss_pred HHhhh
Q psy9483 180 VAGHR 184 (186)
Q Consensus 180 LaGii 184 (186)
++|.+
T Consensus 282 F~ag~ 286 (346)
T 3ktn_A 282 YAAGI 286 (346)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98764
No 24
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A*
Probab=98.41 E-value=2.6e-06 Score=71.26 Aligned_cols=130 Identities=22% Similarity=0.158 Sum_probs=77.3
Q ss_pred cccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEeccccc-------ccccCc--cccc--ccCCCeEecCCH
Q psy9483 52 MNRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLK-------LVAEHP--GLIQ--DYRGPVYLTPNK 120 (186)
Q Consensus 52 ~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~-------~l~~~~--~l~~--~~~~~~iiTPh~ 120 (186)
++.+|++++|. +. .++..+.+.++++.+++.....|+++||.-.. +..... +.++ ..+...+||||.
T Consensus 74 ~~~~~~v~~G~-~~-~~~~~~~~~~~~~~a~~~g~~~~vv~Dp~~~~~~~~sg~~~~~~~~~~~l~~~ll~~~dil~pN~ 151 (312)
T 2yxt_A 74 MNKYDYVLTGY-TR-DKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDGEGSMYVPEDLLPVYKEKVVPLADIITPNQ 151 (312)
T ss_dssp CCCCSEEEECC-CC-CHHHHHHHHHHHHHHHHHCTTCEEEECCCCEEC--CCCEESSCTTHHHHHHHTTGGGCSEECCCH
T ss_pred CccCCEEEECC-CC-CHHHHHHHHHHHHHHHhhCCCCeEEECCCcCCCCCCCCCeeCCHHHHHHHHHHhhhhCCEEcCCH
Confidence 56789988876 33 55666777777777666511235899975321 111110 1121 234458999999
Q ss_pred HHHhhhcCCC-----hH-HHHH-HHHhCCCEEEEEeCCe--------eEEE-------cC-C----eEEEEc-CCCCCCC
Q psy9483 121 REYENLLSGS-----EV-NAAY-IKQGHPNLTVIVKGHE--------DVIK-------NN-Q----ISLTCK-EGNSWRR 172 (186)
Q Consensus 121 ~E~~rL~~~~-----~~-~~a~-~a~~~~~~~vvlKG~~--------~~I~-------~~-~----~~~~~~-~g~~~la 172 (186)
.|++.|++.+ +. +.++ +.+.. ...||+|+.. .+++ ++ + +.+... ...+. .
T Consensus 152 ~Ea~~L~g~~~~~~~~~~~~~~~l~~~g-~~~VvvT~G~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v-d 229 (312)
T 2yxt_A 152 FEAELLSGRKIHSQEEALRVMDMLHSMG-PDTVVITSSDLPSPQGSNYLIVLGSQRRRNPAGSVVMERIRMDIRKVDA-V 229 (312)
T ss_dssp HHHHHHHSCCCCSHHHHHHHHHHHHHHS-CSEEEECCCSCCCTTCTTEEEEEEEEEC----CCCCEEEEEEEEECCSS-C
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHcC-CCEEEEecccCCCCCCCceEEEEEeccccccccccccceEEEeecccCC-C
Confidence 9999999961 22 2556 66655 3678888443 3554 43 2 433322 22223 6
Q ss_pred CCChhHHHHhhhc
Q psy9483 173 CGGQGDLVAGHRD 185 (186)
Q Consensus 173 ~~GsGDvLaGiia 185 (186)
+.|+||.++|.++
T Consensus 230 ttGAGDaf~a~~~ 242 (312)
T 2yxt_A 230 FVGTGDLFAAMLL 242 (312)
T ss_dssp CSSHHHHHHHHHH
T ss_pred CCCchHHHHHHHH
Confidence 9999999998653
No 25
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*
Probab=98.40 E-value=3.1e-06 Score=71.41 Aligned_cols=131 Identities=11% Similarity=0.015 Sum_probs=84.6
Q ss_pred HhcccCcEEEEc---cCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccC----cccc-cccCCCeEecCCHH
Q psy9483 50 YWMNRMHSVLIG---PGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEH----PGLI-QDYRGPVYLTPNKR 121 (186)
Q Consensus 50 ~~~~~~~aivIG---pGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~----~~l~-~~~~~~~iiTPh~~ 121 (186)
+.++.+|.++++ +|+. ++...+.+.++++.+++. ++++++|+..-..+-.. .+.+ +..+...+++||..
T Consensus 141 ~~~~~~~~v~~~g~~~~~~-~~~~~~~~~~~~~~a~~~--g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~ 217 (328)
T 4e69_A 141 AAMARADVVYFSGITLAIL-DQCGRATLLRALAQARAT--GRTIAFDPNLRPRLWAGTGEMTETIMQGAAVSDIALPSFE 217 (328)
T ss_dssp HHHTTCSEEEEEHHHHHTS-CHHHHHHHHHHHHHHHHT--TCEEEEECCCCGGGCSCHHHHHHHHHHHHTTCSEECCBHH
T ss_pred HHhcCCCEEEECCchhhcc-CchHHHHHHHHHHHHHhC--CCEEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEeCCHH
Confidence 556789999996 4443 344566677788777777 88999999632111101 0111 12356799999999
Q ss_pred HHhhhcCCChH-HHHH-HHHhCCCEEEEEeC-Ce-eEEEcCCeEEEEcCC--CCCCCCCChhHHHHhhh
Q psy9483 122 EYENLLSGSEV-NAAY-IKQGHPNLTVIVKG-HE-DVIKNNQISLTCKEG--NSWRRCGGQGDLVAGHR 184 (186)
Q Consensus 122 E~~rL~~~~~~-~~a~-~a~~~~~~~vvlKG-~~-~~I~~~~~~~~~~~g--~~~la~~GsGDvLaGii 184 (186)
|++.|++.++. +.++ +.+... ..||+|. +. .+++++++.+....- .....+.|+||.++|.+
T Consensus 218 E~~~l~g~~~~~~~~~~l~~~g~-~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~ 285 (328)
T 4e69_A 218 DEAAWFGDAGPDATADRYARAGV-RSVVVKNGPHAVHFLQDGRRGRVPVPPVAQVVDTTAAGDSFNAGL 285 (328)
T ss_dssp HHHHHHTCSSHHHHHHHHHTTTC-SEEEEBCTTSCEEEEETTEEEEECCCCCCSCCCCTTHHHHHHHHH
T ss_pred HHHHHcCCCCHHHHHHHHHhcCC-CEEEEEeCCCCeEEEeCCceEEecCCCCCCccCCCChhHHHHHHH
Confidence 99999998443 4666 665542 4666664 43 345566666655543 23346999999998765
No 26
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus}
Probab=98.40 E-value=1.8e-06 Score=71.53 Aligned_cols=123 Identities=18% Similarity=0.279 Sum_probs=74.0
Q ss_pred cccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCcccccccCCCeEecCCHHHHhhhcCC--
Q psy9483 52 MNRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHPGLIQDYRGPVYLTPNKREYENLLSG-- 129 (186)
Q Consensus 52 ~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~~l~~~~~~~~iiTPh~~E~~rL~~~-- 129 (186)
++.+|.+++.--+... ...+.+.++++.+++. +.|+++|+.+-.+ .++++. .+.+++||..|+..|++.
T Consensus 123 ~~~~~~v~~~g~~~~~-~~~~~~~~~~~~a~~~--g~~v~~D~~~~~~----~~~l~~--~~dil~~N~~E~~~l~g~~~ 193 (306)
T 2jg5_A 123 TTSEDIVIVAGSVPSS-IPSDAYAQIAQITAQT--GAKLVVDAEKELA----ESVLPY--HPLFIKPNKDELEVMFNTTV 193 (306)
T ss_dssp CCTTCEEEEESCCCTT-SCTTHHHHHHHHHHHH--CCEEEEECCHHHH----HHHGGG--CCSEECCBHHHHHHHTTSCC
T ss_pred ccCCCEEEEeCCCCCC-CChHHHHHHHHHHHHC--CCEEEEECChHHH----HHHHhc--CCeEEecCHHHHHHHhCCCC
Confidence 4678988875223221 1112344455555556 7899999975321 122221 368999999999999987
Q ss_pred C---hH-HHHH-HHHhCCCEEEEEe-CCe-eEEEcCCeEEEEcC-CCCCCCCCChhHHHHhhh
Q psy9483 130 S---EV-NAAY-IKQGHPNLTVIVK-GHE-DVIKNNQISLTCKE-GNSWRRCGGQGDLVAGHR 184 (186)
Q Consensus 130 ~---~~-~~a~-~a~~~~~~~vvlK-G~~-~~I~~~~~~~~~~~-g~~~la~~GsGDvLaGii 184 (186)
+ +. +.++ +.+.. -..|++| |+. .+++++++.+.... ..+...+.|+||.++|.+
T Consensus 194 ~~~~~~~~~~~~l~~~g-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~ 255 (306)
T 2jg5_A 194 NSDADVIKYGRLLVDKG-AQSVIVSLGGDGAIYIDKEISIKAVNPQGKVVNTVGSGDSTVAGM 255 (306)
T ss_dssp CSHHHHHHHHHHHHHTT-CSCEEEECGGGCEEEECSSEEEEEECCCCCCCCCTTHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcC-CCEEEEccCCCceEEEeCCcEEEEeCCcccccCCcChHHHHHHHH
Confidence 2 22 2555 65544 2467777 553 45566665544432 233457999999988754
No 27
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}
Probab=98.31 E-value=4.9e-06 Score=70.31 Aligned_cols=131 Identities=15% Similarity=0.042 Sum_probs=78.8
Q ss_pred hcccCcEEEE-ccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCc----ccc-cccCCCeEecCCHHHHh
Q psy9483 51 WMNRMHSVLI-GPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHP----GLI-QDYRGPVYLTPNKREYE 124 (186)
Q Consensus 51 ~~~~~~aivI-GpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~----~l~-~~~~~~~iiTPh~~E~~ 124 (186)
.++.+|.+.+ |.....++...+.+.++++.+++. +.++++|+.--..+-... +.+ +..+...+|+||..|+.
T Consensus 149 ~l~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~--g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~Ea~ 226 (336)
T 4du5_A 149 WLLSARHLHATGVFPAISATTLPAARKTMDLMRAA--GRSVSFDPNLRPTLWATPELMRDAINDLATRADWVLPGMEEGR 226 (336)
T ss_dssp HHTTEEEEEEESSGGGSCTTHHHHHHHHHHHHHHT--TCEEEEECCCCGGGSSSHHHHHHHHHHHHTTCSEECCBHHHHH
T ss_pred HhccCCEEEEcCchhhCChHHHHHHHHHHHHHHHC--CCEEEEeCcCCchhcCChHHHHHHHHHHHHhCCEEECCHHHHH
Confidence 4567888775 322233455566677777777777 889999996221110010 111 12356799999999999
Q ss_pred hhcCCChH-HHHH-HHHhCCCEEEEEeCCe--eEEEcCCeEEEEcCCCC--CCCCCChhHHHHhhh
Q psy9483 125 NLLSGSEV-NAAY-IKQGHPNLTVIVKGHE--DVIKNNQISLTCKEGNS--WRRCGGQGDLVAGHR 184 (186)
Q Consensus 125 rL~~~~~~-~~a~-~a~~~~~~~vvlKG~~--~~I~~~~~~~~~~~g~~--~la~~GsGDvLaGii 184 (186)
.|++.++. +.++ +.+... ..|++|... .+++++++.+....-.. .-.+.|+||.++|.+
T Consensus 227 ~l~g~~~~~~~~~~l~~~g~-~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vvdttGAGDaf~a~~ 291 (336)
T 4du5_A 227 FLTGETTPEGVARFYRQLGA-KLVVVKLGAEGAYFDGEAGSGRVAGFPVAEVVDTVGAGDGFAVGV 291 (336)
T ss_dssp HHHCCCSHHHHHHHHHHTTC-SEEEEECGGGCEEEEETTEEEEECCCCC-------CHHHHHHHHH
T ss_pred HHhCCCCHHHHHHHHHhcCC-CEEEEEecCCceEEEECCeEEEeCCccCCCCCCCccchHHHHHHH
Confidence 99998443 4666 766543 566666543 35556666655543332 245999999998765
No 28
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1
Probab=98.31 E-value=2e-06 Score=72.54 Aligned_cols=122 Identities=16% Similarity=0.159 Sum_probs=75.9
Q ss_pred hcccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCcccccccCCCeEecCCHHHHhhhcCC-
Q psy9483 51 WMNRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHPGLIQDYRGPVYLTPNKREYENLLSG- 129 (186)
Q Consensus 51 ~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~~l~~~~~~~~iiTPh~~E~~rL~~~- 129 (186)
.++.+|.++++... .. +.+..+++.+++. ++|+++|+..... ....+++ +...+|+||..|++.|++.
T Consensus 151 ~l~~~~~v~~~~~~--~~---~~~~~~~~~a~~~--g~~v~~Dp~~~~~-~~~~~ll---~~~dil~~N~~Ea~~l~g~~ 219 (331)
T 2fv7_A 151 VISRAKVMVCQLEI--TP---ATSLEALTMARRS--GVKTLFNPAPAIA-DLDPQFY---TLSDVFCCNESEAEILTGLT 219 (331)
T ss_dssp HHHHCSEEEECSSS--CH---HHHHHHHHHHHHT--TCEEEECCCSCCT-TCCTHHH---HTCSEEEEEHHHHHHHHSSC
T ss_pred hhccCCEEEEecCC--CH---HHHHHHHHHHHHc--CCEEEEeCCcccc-cchHHHH---hcCCEEEeCHHHHHHHhCCC
Confidence 45679999997532 22 3344555556666 7899999976420 0011222 3568999999999999986
Q ss_pred -C---hH-HHHH-HHHhCCCEEEEEe-CCee-EEEcCC--eEEEEcCCC-CCCCCCChhHHHHhhh
Q psy9483 130 -S---EV-NAAY-IKQGHPNLTVIVK-GHED-VIKNNQ--ISLTCKEGN-SWRRCGGQGDLVAGHR 184 (186)
Q Consensus 130 -~---~~-~~a~-~a~~~~~~~vvlK-G~~~-~I~~~~--~~~~~~~g~-~~la~~GsGDvLaGii 184 (186)
+ +. +.++ +.++. -..|++| |+.- ++++++ +.+...... ....+.|+||.++|.+
T Consensus 220 ~~~~~~~~~~~~~l~~~g-~~~VvvT~G~~G~~~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~ 284 (331)
T 2fv7_A 220 VGSAADAGEAALVLLKRG-CQVVIITLGAEGCVVLSQTEPEPKHIPTEKVKAVDTTGAGDSFVGAL 284 (331)
T ss_dssp CCSHHHHHHHHHHHHTTT-CSEEEEECGGGCEEEEESSCCSCEEECCCCCCCSCCTTHHHHHHHHH
T ss_pred CCChhHHHHHHHHHHHcC-CCEEEEEECCCceEEEECCCCceeEecCCCCccCCCCCchHHHHHHH
Confidence 1 22 2556 66654 3577777 5543 344444 444444322 2336999999998865
No 29
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri}
Probab=98.25 E-value=6.5e-06 Score=68.80 Aligned_cols=136 Identities=10% Similarity=0.061 Sum_probs=83.7
Q ss_pred HHHHHHhcccCcEEEEc---cCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCc----ccc-cccCCCeEe
Q psy9483 45 VDHIMYWMNRMHSVLIG---PGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHP----GLI-QDYRGPVYL 116 (186)
Q Consensus 45 ~~~~~~~~~~~~aivIG---pGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~----~l~-~~~~~~~ii 116 (186)
++++.+.++.+|.++++ ++. .++...+.+.++++.+++. ++++++|+..-..+-.+. +.+ +..+...++
T Consensus 120 ~~~~~~~l~~~~~v~~~g~~~~~-l~~~~~~~~~~~~~~a~~~--g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~di~ 196 (319)
T 3lhx_A 120 SAAICEELANFDYLYLSGISLAI-LSPTSREKLLSLLRECRAK--GGKVIFDNNYRPRLWASKEETQQVYQQMLECTDIA 196 (319)
T ss_dssp HHHHHHHHTTCSEEEEEHHHHHT-SCHHHHHHHHHHHHHHHHT--TCEEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEE
T ss_pred hhhHHHHhcCCCEEEEcCchhhh-cCchhHHHHHHHHHHHHhc--CCEEEEeCcCCcccccCHHHHHHHHHHHHhhCCcc
Confidence 45555677889999997 221 2344556677778777777 789999996422111111 111 123466899
Q ss_pred cCCHHHHhhhcCCCh-HHHHH-HHHhCCCEEEEEe-CCe-eEEEcCCe-EEEEcCC----CCCCCCCChhHHHHhhh
Q psy9483 117 TPNKREYENLLSGSE-VNAAY-IKQGHPNLTVIVK-GHE-DVIKNNQI-SLTCKEG----NSWRRCGGQGDLVAGHR 184 (186)
Q Consensus 117 TPh~~E~~rL~~~~~-~~~a~-~a~~~~~~~vvlK-G~~-~~I~~~~~-~~~~~~g----~~~la~~GsGDvLaGii 184 (186)
+||..|++.|++.++ .+.++ +.+... ..||+| |+. .+++++++ .+....- .....+.|+||.++|.+
T Consensus 197 ~~n~~E~~~l~g~~~~~~~~~~l~~~g~-~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~ 272 (319)
T 3lhx_A 197 FLTLDDEDALWGQQPVEDVIARTHNAGV-KEVVVKRGADSCLVSIAGEALVDVPAVKLPKEKVIDTTAAGDSFSAGY 272 (319)
T ss_dssp EEEHHHHHHHHCCCCHHHHHHHHHHTTC-SEEEEEETTEEEEEEETTSCCEEECCCCCCGGGCCCCTTHHHHHHHHH
T ss_pred cCCHHHHHHHhCCCCHHHHHHHHHhcCC-CEEEEEECCCCeEEEECCcceEEcccccCCCCccCCCCCccHHHHHHH
Confidence 999999999999844 34666 666542 455555 443 24444443 3233321 12346999999998764
No 30
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A
Probab=98.18 E-value=1.2e-05 Score=67.59 Aligned_cols=131 Identities=16% Similarity=0.038 Sum_probs=82.3
Q ss_pred hcccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCc---ccc-cccCCCeEecCCHHHHhhh
Q psy9483 51 WMNRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHP---GLI-QDYRGPVYLTPNKREYENL 126 (186)
Q Consensus 51 ~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~---~l~-~~~~~~~iiTPh~~E~~rL 126 (186)
.++.+|.++++-=+...+...+.+.++++.+++. +.++++|+..-..+-..+ +.+ +..+...+|+||..|+..|
T Consensus 127 ~~~~~~~v~~sg~~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l 204 (330)
T 3iq0_A 127 ILKDCTHFHIMGSSLFSFHMVDAVKKAVTIVKAN--GGVISFDPNIRKEMLDIPEMRDALHFVLELTDIYMPSEGEVLLL 204 (330)
T ss_dssp GGTTEEEEEEEGGGCSSHHHHHHHHHHHHHHHHT--TCEEEEECCCCGGGGGSHHHHHHHHHHHHTCSEECCBGGGTTTT
T ss_pred HhccCCEEEEechhhcCcchHHHHHHHHHHHHHc--CCEEEEcCCCCccccCcHHHHHHHHHHHhhCCEEecCHHHHHHH
Confidence 4567898888532224555566677788777777 889999996543221111 111 1224569999999999999
Q ss_pred cCCCh-HHHHH-HHHhCCCEEEEEe-CCe-eEEEcCCeEEEEcCC-CCCCCCCChhHHHHhhh
Q psy9483 127 LSGSE-VNAAY-IKQGHPNLTVIVK-GHE-DVIKNNQISLTCKEG-NSWRRCGGQGDLVAGHR 184 (186)
Q Consensus 127 ~~~~~-~~~a~-~a~~~~~~~vvlK-G~~-~~I~~~~~~~~~~~g-~~~la~~GsGDvLaGii 184 (186)
++.++ .+.++ +.+... ..|++| |+. .+++++++.+....- ...--+.|+||.++|.+
T Consensus 205 ~g~~~~~~~~~~l~~~g~-~~vvvT~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~ 266 (330)
T 3iq0_A 205 SPHSTPERAIAGFLEEGV-KEVIVKRGNQGASYYSANEQFHVESYPVEEVDPTGAGDCFGGAW 266 (330)
T ss_dssp CSCSSHHHHHHHHHHHTC-SEEEEECGGGCEEEECSSCEEEECCCCCCCSCCTTHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHcCC-CEEEEEeCCCceEEEECCceEEecCCCCccCCCCChHHHHHHHH
Confidence 99843 34666 666543 455555 443 345555555544432 22336999999998765
No 31
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=98.16 E-value=1.1e-05 Score=67.46 Aligned_cols=126 Identities=19% Similarity=0.212 Sum_probs=78.2
Q ss_pred HHHhcccCcEEEE-ccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCcccccccCCCeEecCCHHHHhhh
Q psy9483 48 IMYWMNRMHSVLI-GPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHPGLIQDYRGPVYLTPNKREYENL 126 (186)
Q Consensus 48 ~~~~~~~~~aivI-GpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~~l~~~~~~~~iiTPh~~E~~rL 126 (186)
+.+.++.+|.+++ |. +... ...+.+.++++.+++. ++++++|+..-.+ .+.+. ..+.+++||..|+..|
T Consensus 127 ~~~~~~~~~~v~~~g~-~~~~-~~~~~~~~~~~~a~~~--g~~v~~D~~~~~l----~~~l~--~~~dil~~N~~E~~~l 196 (320)
T 3ie7_A 127 IAKKVKKEDMVVIAGS-PPPH-YTLSDFKELLRTVKAT--GAFLGCDNSGEYL----NLAVE--MGVDFIKPNEDEVIAI 196 (320)
T ss_dssp HHHHCCTTCEEEEESC-CCTT-CCHHHHHHHHHHHHHH--TCEEEEECCHHHH----HHHHH--HCCSEECCBTTGGGGG
T ss_pred HHHHhcCCCEEEEeCC-CCCC-CCHHHHHHHHHHHHhc--CCEEEEECChHHH----HHHHh--cCCeEEeeCHHHHHHH
Confidence 3456788999999 54 3221 1224455666666666 8899999964211 11121 1569999999999999
Q ss_pred cCCC---hHHHHH-HHHhCCCEEEEEeCCe-eEEEcCCeEEEEcCCC-CCCCCCChhHHHHhhh
Q psy9483 127 LSGS---EVNAAY-IKQGHPNLTVIVKGHE-DVIKNNQISLTCKEGN-SWRRCGGQGDLVAGHR 184 (186)
Q Consensus 127 ~~~~---~~~~a~-~a~~~~~~~vvlKG~~-~~I~~~~~~~~~~~g~-~~la~~GsGDvLaGii 184 (186)
++.+ +.+.++ ++++. ..+|+=.|+. .+++++++.+....-. ...-+.|+||.++|.+
T Consensus 197 ~g~~~~~~~~~~~~~~~~~-~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~ 259 (320)
T 3ie7_A 197 LDEKTNSLEENIRTLAEKI-PYLVVSLGAKGSICAHNGKLYQVIPPKVQERNDTGAGDVFVGAF 259 (320)
T ss_dssp SCTTCCCHHHHHHHHTTTC-SEEEEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHH
T ss_pred hCCCcCCCHHHHHHHHhhC-CEEEEEcCCCceEEEeCCcEEEEeCCccCCCCCcCchHHHHHHH
Confidence 9982 344444 65554 3444444544 3455666655544332 2346999999998765
No 32
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str}
Probab=98.15 E-value=1.5e-05 Score=67.73 Aligned_cols=120 Identities=12% Similarity=0.063 Sum_probs=76.1
Q ss_pred hcccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCccccc-ccCCCeEecCCHHHHhhhcCC
Q psy9483 51 WMNRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHPGLIQ-DYRGPVYLTPNKREYENLLSG 129 (186)
Q Consensus 51 ~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~~l~~-~~~~~~iiTPh~~E~~rL~~~ 129 (186)
.++.+|.++++.-+ .+ .+.++++.+++. +.++++|+.... ..+.+ ..+.+.+++||..|+..|++.
T Consensus 154 ~l~~~~~v~~~~~~---~~---~~~~~~~~a~~~--g~~v~~Dp~~~~-----~~~~~~ll~~~dil~~N~~Ea~~l~g~ 220 (343)
T 2rbc_A 154 DIALFDAVLVDVRW---PE---LALDVLTVARAL--GKPAILDGDVAP-----VETLEGLAPAATHIVFSEPAATRLTGL 220 (343)
T ss_dssp HHTTCSEEEECSSS---HH---HHHHHHHHHHHT--TCCEEEEECSCC-----HHHHHHHGGGCSEEEEEHHHHHHHHCC
T ss_pred hhCCCCEEEEcCCC---HH---HHHHHHHHHHHC--CCEEEEECCccc-----cccHHHHHhcCCEEEeCHHHHHHHcCC
Confidence 45679999998532 22 344555555566 789999997531 11111 224568999999999999998
Q ss_pred ChH-HHHH-HHHhCCC-EEEEEe-CCee-EEEcCC--eEEEEcCCC-CCCCCCChhHHHHhhh
Q psy9483 130 SEV-NAAY-IKQGHPN-LTVIVK-GHED-VIKNNQ--ISLTCKEGN-SWRRCGGQGDLVAGHR 184 (186)
Q Consensus 130 ~~~-~~a~-~a~~~~~-~~vvlK-G~~~-~I~~~~--~~~~~~~g~-~~la~~GsGDvLaGii 184 (186)
++. +.++ +.+.. . ..|++| |+.- ++++++ +.+....-. ...-+.|+||.++|.+
T Consensus 221 ~~~~~~~~~l~~~g-~~~~VvvT~G~~G~~~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~ 282 (343)
T 2rbc_A 221 ETVKDMLPVLHARY-PQTFIAVTAGPAGCWWTEADDPTVHFQTTMQVEAVDTLAAGDIFHGTF 282 (343)
T ss_dssp SSHHHHHHHHHHHS-TTSEEEEECGGGCEEEECTTCCCEEEECCCCCCCSCCTTHHHHHHHHH
T ss_pred CCHHHHHHHHHHhC-CCceEEEEECCcceEEEeCCCceeEEecCCCCccccCCChHHHHHHHH
Confidence 443 4666 76654 3 366666 4433 445554 554444322 2346999999998754
No 33
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1
Probab=98.11 E-value=6.6e-06 Score=69.65 Aligned_cols=132 Identities=11% Similarity=-0.012 Sum_probs=79.7
Q ss_pred hcccCcEEEEccCCC-CCHHHHHHHHHHHHHHHhcCCCCCEEEeccccccc-cc--Ccccc-cccCCCeEecCCHHHHhh
Q psy9483 51 WMNRMHSVLIGPGLG-TEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLV-AE--HPGLI-QDYRGPVYLTPNKREYEN 125 (186)
Q Consensus 51 ~~~~~~aivIGpGlg-~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l-~~--~~~l~-~~~~~~~iiTPh~~E~~r 125 (186)
.++.+|.++++.-+. .++...+.+.++++.+++. +.++++|+..-..+ .. ..+.+ +..+...+|+||..|+..
T Consensus 135 ~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~--g~~v~~Dp~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~ 212 (351)
T 2afb_A 135 ILDGARWFHFSGITPPLGKELPLILEDALKVANEK--GVTVSCDLNYRARLWTKEEAQKVMIPFMEYVDVLIANEEDIEK 212 (351)
T ss_dssp HTTTEEEEEEETTSGGGSTTHHHHHHHHHHHHHHH--TCEEEEECCCCTTTCCHHHHHHHHHHHGGGCSEEEECHHHHHH
T ss_pred hhcCCCEEEEeCcccccChhHHHHHHHHHHHHHHc--CCEEEEeCCCchhcCChHHHHHHHHHHHhhCCEEEecHHHHHH
Confidence 457899999974332 1333445666777777666 88999999742111 10 00111 122356899999999999
Q ss_pred hcCC-C----------h---H-HHHH-HHHhCCCEEEEEe-CCe---------eEEEcCCeEEEEcCCC-CCCCCCChhH
Q psy9483 126 LLSG-S----------E---V-NAAY-IKQGHPNLTVIVK-GHE---------DVIKNNQISLTCKEGN-SWRRCGGQGD 178 (186)
Q Consensus 126 L~~~-~----------~---~-~~a~-~a~~~~~~~vvlK-G~~---------~~I~~~~~~~~~~~g~-~~la~~GsGD 178 (186)
|++. . + . +.++ +.++++-..|++| |+. .+++++++.+....-. ....+.|+||
T Consensus 213 l~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~vvvT~G~~G~~~~~~~g~~~~~~~~~~~~~~~~v~vvdttGAGD 292 (351)
T 2afb_A 213 VLGISVEGLDLKTGKLNREAYAKIAEEVTRKYNFKTVGITLRESISATVNYWSVMVFENGQPHFSNRYEIHIVDRVGAGD 292 (351)
T ss_dssp HHCCCCSCC-------CHHHHHHHHHHHHHHHCCSEEEEEEEECSCSSEEEEEEEEEETTEEEECCCEEEECSCCTTHHH
T ss_pred HhCCCcccccccccccchhhHHHHHHHHHHHcCCCEEEEEeCCcCccccccceeEEEeCCcEEEcCCCCCccCCCCCchH
Confidence 9986 2 1 2 2555 6665322367777 543 2556666554433211 1346999999
Q ss_pred HHHhhh
Q psy9483 179 LVAGHR 184 (186)
Q Consensus 179 vLaGii 184 (186)
.++|.+
T Consensus 293 aF~ag~ 298 (351)
T 2afb_A 293 SFAGAL 298 (351)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998865
No 34
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=98.08 E-value=6.8e-05 Score=63.95 Aligned_cols=125 Identities=19% Similarity=0.256 Sum_probs=76.1
Q ss_pred HHHHHhcccCcEEEEc-cCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCcccccccCCCeEecCCHHHHh
Q psy9483 46 DHIMYWMNRMHSVLIG-PGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHPGLIQDYRGPVYLTPNKREYE 124 (186)
Q Consensus 46 ~~~~~~~~~~~aivIG-pGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~~l~~~~~~~~iiTPh~~E~~ 124 (186)
+.+.+.++.+|.+++. .+-+..+. +.++++.+++. ++++++|+... . +...+.+.+|+||..|++
T Consensus 178 ~~~~~~l~~~~~v~~~g~~~~~~~~----~~~~~~~a~~~--g~~v~~D~~~~-----~---~~~l~~~dil~pN~~Ea~ 243 (352)
T 4e84_A 178 ARFDVLLPQHDVVLMSDYAKGGLTH----VTTMIEKARAA--GKAVLVDPKGD-----D---WARYRGASLITPNRAELR 243 (352)
T ss_dssp HHHHHHGGGCSEEEEECCSSSSCSS----HHHHHHHHHHT--TCEEEEECCSS-----C---CSTTTTCSEECCBHHHHH
T ss_pred HHHHHhcccCCEEEEeCCCCCCHHH----HHHHHHHHHhc--CCEEEEECCCc-----c---hhhccCCcEEcCCHHHHH
Confidence 3345567889999996 11112222 33455555556 88999999652 1 112345799999999999
Q ss_pred hhcCC--C--hH-HHHH-HHHhCCCEEEEEe-CCe-eEEEcCCeEEEEcCC-CCCCCCCChhHHHHhhh
Q psy9483 125 NLLSG--S--EV-NAAY-IKQGHPNLTVIVK-GHE-DVIKNNQISLTCKEG-NSWRRCGGQGDLVAGHR 184 (186)
Q Consensus 125 rL~~~--~--~~-~~a~-~a~~~~~~~vvlK-G~~-~~I~~~~~~~~~~~g-~~~la~~GsGDvLaGii 184 (186)
.|++. + +. +.++ +.++++-..||+| |.. .+++++++.+....- ....-+.|.||.+.|.+
T Consensus 244 ~l~g~~~~~~~~~~~a~~l~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~pa~~v~vvDttGAGDaF~ag~ 312 (352)
T 4e84_A 244 EVVGQWKSEDDLRARVANLRAELDIDALLLTRSEEGMTLFSAGGELHAPALAREVFDVSGAGDTVIATV 312 (352)
T ss_dssp HHHCCCSSHHHHHHHHHHHHHHHTCSEEEEECGGGCEEEEETTEEEEECCCCSCCSCCTTHHHHHHHHH
T ss_pred HHhCCCCCHHHHHHHHHHHHHHhCCCEEEEEcCCCcEEEEECCceEEecCCCcCccCCccccHHHHHHH
Confidence 99995 2 22 2555 6553321345554 554 345566665554432 22346999999998764
No 35
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A*
Probab=98.07 E-value=3.3e-05 Score=64.04 Aligned_cols=124 Identities=17% Similarity=0.236 Sum_probs=73.7
Q ss_pred ccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCcccccccCCCeEecCCHHHHhhhcCCC--
Q psy9483 53 NRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHPGLIQDYRGPVYLTPNKREYENLLSGS-- 130 (186)
Q Consensus 53 ~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~~l~~~~~~~~iiTPh~~E~~rL~~~~-- 130 (186)
+..+.+++.--+... ...+.+.++++.+++. ++++++|+..-.+ .+++.. ..+.+++||..|++.|++.+
T Consensus 129 ~~~~~~~~~g~~~~~-~~~~~~~~~~~~a~~~--~~~v~~D~~~~~l----~~~l~~-~~~dil~~N~~E~~~l~g~~~~ 200 (309)
T 3umo_A 129 ESGAILVISGSLPPG-VKLEKLTQLISAAQKQ--GIRCIVDSSGEAL----SAALAI-GNIELVKPNQKELSALVNRELT 200 (309)
T ss_dssp CTTCEEEEESCCCTT-CCHHHHHHHHHHHHHT--TCEEEEECCHHHH----HHHTSS-CCBSEECCBHHHHHHHHTSCCC
T ss_pred CCCCEEEEEccCCCC-CCHHHHHHHHHHHHhc--CCEEEEECCcHHH----HHHhcc-CCCeEEEeCHHHHHHHhCCCCC
Confidence 456677764333321 1234455667666666 8899999953211 012211 11589999999999999971
Q ss_pred ---hH-HHHH-HHHhCCCEEEEEe-CCe-eEEEcCCeEEEEcCC-CCCCCCCChhHHHHhhh
Q psy9483 131 ---EV-NAAY-IKQGHPNLTVIVK-GHE-DVIKNNQISLTCKEG-NSWRRCGGQGDLVAGHR 184 (186)
Q Consensus 131 ---~~-~~a~-~a~~~~~~~vvlK-G~~-~~I~~~~~~~~~~~g-~~~la~~GsGDvLaGii 184 (186)
+. +.++ +.++.....|++| |+. .+++++++.+..... .....+.|+||.++|.+
T Consensus 201 ~~~~~~~~~~~l~~~g~~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGD~f~a~~ 262 (309)
T 3umo_A 201 QPDDVRKAAQEIVNSGKAKRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAM 262 (309)
T ss_dssp STTHHHHHHHHHHHTTSBSCEEEECGGGCEEEECSSCEEEECCCSCCCSCCTTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCcEEEEEcCcccEEEEECCcEEEEeCCCcCCCCCcChHHHHHHHH
Confidence 33 3566 7777620144554 554 355565555444432 23346999999998865
No 36
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A*
Probab=98.04 E-value=1.8e-05 Score=66.30 Aligned_cols=126 Identities=20% Similarity=0.227 Sum_probs=74.2
Q ss_pred hcccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCcccccccCCCeEecCCHHHHhhhcCCC
Q psy9483 51 WMNRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHPGLIQDYRGPVYLTPNKREYENLLSGS 130 (186)
Q Consensus 51 ~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~~l~~~~~~~~iiTPh~~E~~rL~~~~ 130 (186)
.++.+|.+++.-.+.... ..+.+.++++.+++. +.++++|+.+-.+ .+++...+.+.+++||..|+..|++.+
T Consensus 126 ~~~~~~~v~~~g~~~~~~-~~~~~~~~~~~a~~~--g~~v~~Dp~~~~~----~~~l~~~~~~dil~~N~~E~~~l~g~~ 198 (323)
T 2f02_A 126 LIKQAEIVTISGSLAKGL-PSDFYQELVQKAHAQ--EVKVLLDTSGDSL----RQVLQGPWKPYLIKPNLEELEGLLGQD 198 (323)
T ss_dssp HHTTCSEEEEESCCCBTS-CTTHHHHHHHHHHHT--TCEEEEECCTHHH----HHHHHSSCCCSEECCBHHHHHHHHTCC
T ss_pred hccCCCEEEEECCCCCCC-ChHHHHHHHHHHHHC--CCEEEEECChHHH----HHHHhccCCCeEEecCHHHHHHHhCCC
Confidence 457899998832233211 112344555555556 7899999975221 122221135689999999999999872
Q ss_pred ---h----H-HHHH-HHHhCCCEEEEEe-CCee-EEEcCCeEEEEcCCCC-CCCCCChhHHHHhhh
Q psy9483 131 ---E----V-NAAY-IKQGHPNLTVIVK-GHED-VIKNNQISLTCKEGNS-WRRCGGQGDLVAGHR 184 (186)
Q Consensus 131 ---~----~-~~a~-~a~~~~~~~vvlK-G~~~-~I~~~~~~~~~~~g~~-~la~~GsGDvLaGii 184 (186)
+ . +.++ +.++.. ..|++| |+.- +++++++.+....... .-.+.|+||.++|.+
T Consensus 199 ~~~~~~~~~~~~~~~l~~~g~-~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~a~~ 263 (323)
T 2f02_A 199 FSENPLAAVQTALTKPMFAGI-EWIVISLGKDGAIAKHHDQFYRVKIPTIQAKNPVGSGDATIAGL 263 (323)
T ss_dssp CCSSCHHHHHHHHTSGGGTTC-SEEEEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHcCC-CEEEEeecCCceEEEeCCCEEEEcCCCccccCCccHHHHHHHHH
Confidence 1 2 2445 555432 345555 5433 4455665554443322 336999999998764
No 37
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A*
Probab=98.03 E-value=1.4e-05 Score=68.21 Aligned_cols=131 Identities=13% Similarity=0.096 Sum_probs=82.3
Q ss_pred hcccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCcc-cccccC--CCeEecCCHHHHhhhc
Q psy9483 51 WMNRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHPG-LIQDYR--GPVYLTPNKREYENLL 127 (186)
Q Consensus 51 ~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~~-l~~~~~--~~~iiTPh~~E~~rL~ 127 (186)
.++.++.+++.-=+...+...+.+.++++.+++. ++++++|+..........+ +.+..+ ...+++||..|+..|+
T Consensus 168 ~~~~~~~v~~~G~~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~~~~~~~~~~l~~ll~~~~~dil~~N~~Ea~~l~ 245 (352)
T 4e3a_A 168 VVADAKVTYFEGYLWDPPRAKEAILDCARIAHQH--GREMSMTLSDSFCVDRYRGEFLDLMRSGKVDIVFANRQEALSLY 245 (352)
T ss_dssp HHHTEEEEEEEGGGGSSSSHHHHHHHHHHHHHHT--TCEEEEECCCHHHHHHHHHHHHHHHHTTSCCEEEEEHHHHHHHT
T ss_pred HHhhCCEEEEeeeecCCchHHHHHHHHHHHHHHc--CCEEEEECCchhhHHHHHHHHHHHhcccCCcEEEeCHHHHHHHh
Confidence 4567899888421222333456666777777777 8899999965432211111 112223 4699999999999999
Q ss_pred CCChH-HHHH-HHHhCCCEEEEEeCCe-eEEEcCCeEEEEcCCCC--CCCCCChhHHHHhhh
Q psy9483 128 SGSEV-NAAY-IKQGHPNLTVIVKGHE-DVIKNNQISLTCKEGNS--WRRCGGQGDLVAGHR 184 (186)
Q Consensus 128 ~~~~~-~~a~-~a~~~~~~~vvlKG~~-~~I~~~~~~~~~~~g~~--~la~~GsGDvLaGii 184 (186)
+.++. ++++ +.+.. ..+|+=.|+. .+++++++.+....-.. ---+.|+||.++|.+
T Consensus 246 g~~~~~~a~~~l~~~~-~~vvvT~G~~G~~~~~~~~~~~~~~~~v~~vvDttGAGDaF~agf 306 (352)
T 4e3a_A 246 QTDDFEEALNRIAADC-KIAAVTMSENGAVILKGRERYYVNAIRIREVVDTTGAGDLFASGF 306 (352)
T ss_dssp TCSCHHHHHHHHHHHS-SEEEEECGGGCEEEEETTEEEEECCCCCSCCSCCTTHHHHHHHHH
T ss_pred CCCCHHHHHHHHhcCC-CEEEEEECCCceEEEECCEEEEECCccCCCCcCCCChHHHHHHHH
Confidence 98433 4666 77766 3444444543 35566676665554332 246999999998864
No 38
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A*
Probab=98.01 E-value=8.8e-06 Score=68.54 Aligned_cols=131 Identities=9% Similarity=-0.006 Sum_probs=75.0
Q ss_pred hcccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccc-cC---ccccc-ccCCCeEecCCHHHHhh
Q psy9483 51 WMNRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVA-EH---PGLIQ-DYRGPVYLTPNKREYEN 125 (186)
Q Consensus 51 ~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~-~~---~~l~~-~~~~~~iiTPh~~E~~r 125 (186)
.++.+|.+.++.+....+...+.+.++++.+++. +.++++|+.--..+- .. .+.+. ..+...||+||..|+..
T Consensus 126 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~--g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~ 203 (338)
T 3ljs_A 126 SFSDALIFHACSNSMTDADIAEVTFEGMRRAQAA--GAIVSFDLNFRPMLWPNGENPASRLWKGLSLADVVKLSSEELDY 203 (338)
T ss_dssp HHHTEEEEEEEGGGGSSHHHHHHHHHHHHHHHHT--TCEEEEECCCCGGGSCTTCCTHHHHHHHHHTCSEEEEEHHHHHH
T ss_pred HhcCCCEEEECChHhcCchHHHHHHHHHHHHHHc--CCEEEEECCCChhhcCCHHHHHHHHHHHHhhCCEEEecHHHHHH
Confidence 4567899988765444565667777888877777 889999994322111 01 11111 12456999999999999
Q ss_pred hcCC-C--hHHHHH-HHHhCCCEEEEEe-CCe-eEEEcCCeEEEEcCCC-CCCCCCChhHHHHhhh
Q psy9483 126 LLSG-S--EVNAAY-IKQGHPNLTVIVK-GHE-DVIKNNQISLTCKEGN-SWRRCGGQGDLVAGHR 184 (186)
Q Consensus 126 L~~~-~--~~~~a~-~a~~~~~~~vvlK-G~~-~~I~~~~~~~~~~~g~-~~la~~GsGDvLaGii 184 (186)
|++. + +.+.++ +.+... ..||+| |+. .+++++++.+....-. ..--+.|+||.++|.+
T Consensus 204 l~g~~~~~~~~~~~~l~~~g~-~~vvvT~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~a~~ 268 (338)
T 3ljs_A 204 LANTLAADANAVIQQLWQGRA-QLLLVTDAAGPVHWYTRTAGGEVPTFRVQVQDSNAAGDAFVGGM 268 (338)
T ss_dssp HHHHHTSCHHHHHHHHTTTTC-CEEEEEETTEEEEEEESSCEEEECC-----------CHHHHHHH
T ss_pred HhCCCChhHHHHHHHHHhcCC-CEEEEeeCCCceEEEECCceEEeCCCCCccCCCCCccHHHHHHH
Confidence 9986 2 212556 655432 455554 443 3445555554444322 2235899999998765
No 39
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A*
Probab=98.00 E-value=4.9e-05 Score=62.93 Aligned_cols=123 Identities=18% Similarity=0.270 Sum_probs=73.3
Q ss_pred hcccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCcccccccCCC-eEecCCHHHHhhhcCC
Q psy9483 51 WMNRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHPGLIQDYRGP-VYLTPNKREYENLLSG 129 (186)
Q Consensus 51 ~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~~l~~~~~~~-~iiTPh~~E~~rL~~~ 129 (186)
.++. |.+++..-+... ...+.+.++++.+++. +.++++|+.+-.+ .+.+. +.+ .+++||..|+..|++.
T Consensus 128 ~~~~-~~v~~~g~~~~~-~~~~~~~~~~~~a~~~--g~~v~~D~~~~~~----~~~l~--~~~~dil~~N~~E~~~l~g~ 197 (309)
T 3cqd_A 128 IESG-AILVISGSLPPG-VKLEKLTQLISAAQKQ--GIRCIVDSSGEAL----SAALA--IGNIELVKPNQKELSALVNR 197 (309)
T ss_dssp SCTT-CEEEEESCCCTT-CCHHHHHHHHHHHHTT--TCEEEEECCHHHH----HHHTT--TCCBSEECCBHHHHHHHHTS
T ss_pred hhcC-CEEEEECCCCCC-CCHHHHHHHHHHHHHc--CCeEEEECChHHH----HHHHH--hCCCEEEeeCHHHHHHHhCC
Confidence 3566 888775334321 1224455666666666 7899999975321 11121 456 8999999999999986
Q ss_pred -----ChH-HHHH-HHHhC-CCEEEEEe-CCe-eEEEcCCeEEEEcCCC-CCCCCCChhHHHHhhh
Q psy9483 130 -----SEV-NAAY-IKQGH-PNLTVIVK-GHE-DVIKNNQISLTCKEGN-SWRRCGGQGDLVAGHR 184 (186)
Q Consensus 130 -----~~~-~~a~-~a~~~-~~~~vvlK-G~~-~~I~~~~~~~~~~~g~-~~la~~GsGDvLaGii 184 (186)
++. +.++ +.+.. . ..|++| |+. .+++++++.+...... ..-.+.|+||.++|.+
T Consensus 198 ~~~~~~~~~~~~~~l~~~g~~-~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~ 262 (309)
T 3cqd_A 198 ELTQPDDVRKAAQEIVNSGKA-KRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAM 262 (309)
T ss_dssp CCCSTTHHHHHHHHHHHTTSB-SCEEEECGGGCEEEECSSCEEEECCCSCCCCCCTTHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCC-CEEEEEecCCceEEEECCceEEEeCCccccCCCcCcHHHHHHHH
Confidence 133 3555 65543 2 244554 443 3445555555444322 2235999999998754
No 40
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str}
Probab=98.00 E-value=4.2e-05 Score=63.82 Aligned_cols=124 Identities=15% Similarity=0.068 Sum_probs=73.6
Q ss_pred HhcccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCcccccccCCCeEecCCHHHHhhhcCC
Q psy9483 50 YWMNRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHPGLIQDYRGPVYLTPNKREYENLLSG 129 (186)
Q Consensus 50 ~~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~~l~~~~~~~~iiTPh~~E~~rL~~~ 129 (186)
+.++.++.++++..+ .. +.+..+++.+++. +.++++|+..........++ .+...+++||..|+..|++.
T Consensus 130 ~~~~~~~~v~~~~~~--~~---~~~~~~~~~a~~~--g~~v~~Dp~~~~~~~~~~~l---l~~~dil~~N~~E~~~l~g~ 199 (317)
T 2nwh_A 130 EAIIASDFLLCDANL--PE---DTLTALGLIARAC--EKPLAAIAISPAKAVKLKAA---LGDIDILFMNEAEARALTGE 199 (317)
T ss_dssp HHHHHCSEEEEETTS--CH---HHHHHHHHHHHHT--TCCEEEECCSHHHHGGGTTT---GGGCSEEEEEHHHHHHHHC-
T ss_pred hHhccCCEEEEeCCC--CH---HHHHHHHHHHHhc--CCeEEEeCCCHHHHHHHHHH---hhhCeEecCCHHHHHHHhCC
Confidence 456679999997543 22 3344556656666 78999999753211111122 24568999999999999986
Q ss_pred --ChH-HHHH-HHHhCCCEEEEEe-CCee-EEEcCC-eEEEEcCCC-CCCCCCChhHHHHhhh
Q psy9483 130 --SEV-NAAY-IKQGHPNLTVIVK-GHED-VIKNNQ-ISLTCKEGN-SWRRCGGQGDLVAGHR 184 (186)
Q Consensus 130 --~~~-~~a~-~a~~~~~~~vvlK-G~~~-~I~~~~-~~~~~~~g~-~~la~~GsGDvLaGii 184 (186)
++. +.++ +.+... ..|++| |+.- ++++++ ..+....-. ..-.+.|+||.++|.+
T Consensus 200 ~~~~~~~~~~~l~~~g~-~~vvvt~G~~G~~~~~~~~~~~~~~~~~v~~vdt~GAGDaf~a~~ 261 (317)
T 2nwh_A 200 TAENVRDWPNILRKAGL-SGGVVTRGASEVVAFNGTEKAILHPPLIREVKDVTGAGDAMASGY 261 (317)
T ss_dssp ----CTTHHHHHHHTTC-CCEEEEETTTEEEEECSSCEEEECCCCSSSCSCCCCSSHHHHHHH
T ss_pred ChhHHHHHHHHHHHcCC-CEEEEEECCCcEEEEcCCCceEEeCCCCccccCCCChhHHHHHHH
Confidence 222 3556 665542 345554 5433 444544 344443222 2336999999998764
No 41
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1
Probab=97.98 E-value=4.4e-05 Score=63.25 Aligned_cols=123 Identities=15% Similarity=0.232 Sum_probs=73.1
Q ss_pred cccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCcccccccCCCeEecCCHHHHhhhcCC--
Q psy9483 52 MNRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHPGLIQDYRGPVYLTPNKREYENLLSG-- 129 (186)
Q Consensus 52 ~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~~l~~~~~~~~iiTPh~~E~~rL~~~-- 129 (186)
++.+|.+++..-+... ...+.+.++++.+++. +.++++|+.+-.+ .++++. .+.+++||..|+..|++.
T Consensus 123 ~~~~~~v~~~g~~~~~-~~~~~~~~~~~~a~~~--g~~v~~D~~~~~~----~~~l~~--~~dil~~N~~E~~~l~g~~~ 193 (306)
T 2abq_A 123 LEKGDVLVLAGSVPQA-MPQTIYRSMTQIAKER--GAFVAVDTSGEAL----HEVLAA--KPSFIKPNHHELSELVSKPI 193 (306)
T ss_dssp CCTTCEEEEESCCCTT-SCTTHHHHHHHHHHTT--TCEEEEECCHHHH----HHHGGG--CCSEECCBHHHHHHHHTSCC
T ss_pred ccCCCEEEEecCCCCC-CCHHHHHHHHHHHHhc--CCEEEEECChHHH----HHHHhc--CCcEEecCHHHHHHHhCCCC
Confidence 4679998873223221 1123344556666556 7899999975211 122221 568999999999999987
Q ss_pred C---hH-HHHH-HHHhCCCEEEEEe-CCee-EEEcCCeEEEEcCCC-CCCCCCChhHHHHhhh
Q psy9483 130 S---EV-NAAY-IKQGHPNLTVIVK-GHED-VIKNNQISLTCKEGN-SWRRCGGQGDLVAGHR 184 (186)
Q Consensus 130 ~---~~-~~a~-~a~~~~~~~vvlK-G~~~-~I~~~~~~~~~~~g~-~~la~~GsGDvLaGii 184 (186)
+ +. +.++ +.+... ..|++| |+.- +++++++.+...... ..--+.|+||.++|.+
T Consensus 194 ~~~~~~~~~~~~l~~~g~-~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~a~~ 255 (306)
T 2abq_A 194 ASIEDAIPHVQRLIGEGI-ESILVSFAGDGALFASAEGMFHVNVPSGEVRNSVGAGDSVVAGF 255 (306)
T ss_dssp CSHHHHHHHHHHHHHTTC-CEEEEECGGGCEEEEETTEEEEECCCCCCCCCCSSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCC-CEEEEecCCCceEEEeCCCEEEEeCCCccccCCccHHHHHHHHH
Confidence 2 22 2555 665542 455554 4433 445556555544322 2235899999998754
No 42
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens}
Probab=97.97 E-value=7.6e-05 Score=62.56 Aligned_cols=125 Identities=11% Similarity=0.048 Sum_probs=75.2
Q ss_pred HHHHhcccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCcccccccCCCeEecCCHHHHhhh
Q psy9483 47 HIMYWMNRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHPGLIQDYRGPVYLTPNKREYENL 126 (186)
Q Consensus 47 ~~~~~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~~l~~~~~~~~iiTPh~~E~~rL 126 (186)
+..+.+..+|.+++...+. + .+..+++ +++. +.++++|+..........+++ +...+++||..|+..|
T Consensus 129 ~~~~~~~~~~~~~~~~~~~---~---~~~~l~~-a~~~--~~~v~~D~~~~~~~~~~~~~l---~~~dil~~N~~E~~~l 196 (328)
T 3kzh_A 129 SKREIFENAEYTVLDSDNP---E---IMEYLLK-NFKD--KTNFILDPVSAEKASWVKHLI---KDFHTIKPNRHEAEIL 196 (328)
T ss_dssp HTHHHHHTCSEEEEESSCH---H---HHHHHHH-HHTT--TSEEEEECCSHHHHHTSTTTG---GGCSEECCBHHHHHHH
T ss_pred HHHHhhccCCEEEEeCCcH---H---HHHHHHH-Hhhc--CCcEEEEeCCHHHHHHHHHHh---cCCcEEeCCHHHHHHH
Confidence 3345567899999976432 2 3334444 4445 789999997543211111222 3568999999999999
Q ss_pred cCCC-----hH-HHHH-HHHhCCCEEEEEe-CCee-EEEcCCeEEEEcC-CCCCCCCCChhHHHHhhh
Q psy9483 127 LSGS-----EV-NAAY-IKQGHPNLTVIVK-GHED-VIKNNQISLTCKE-GNSWRRCGGQGDLVAGHR 184 (186)
Q Consensus 127 ~~~~-----~~-~~a~-~a~~~~~~~vvlK-G~~~-~I~~~~~~~~~~~-g~~~la~~GsGDvLaGii 184 (186)
++.+ +. +.++ +.+... ..|++| |+.- ++++++..+.... ......+.|+||.++|.+
T Consensus 197 ~g~~~~~~~~~~~~~~~l~~~g~-~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~ag~ 263 (328)
T 3kzh_A 197 AGFPITDTDDLIKASNYFLGLGI-KKVFISLDADGIFYNDGVSCGKIKATEVDVKNVTGAGDSFVAGL 263 (328)
T ss_dssp HTSCCCSHHHHHHHHHHHHHHTC-CEEEEECGGGCEEEECSSCEEEEEESSCCCSCCTTHHHHHHHHH
T ss_pred HCCCCCCHHHHHHHHHHHHHhCC-CEEEEEeCCCCEEEEeCCceEEecCCCcccCCCCChhHHHHHHH
Confidence 9961 22 2555 666542 455555 4433 4455554444332 233346999999998764
No 43
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1
Probab=97.95 E-value=9.5e-05 Score=61.67 Aligned_cols=119 Identities=20% Similarity=0.164 Sum_probs=73.6
Q ss_pred HhcccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCcccccccCCCeEecCCHHHHhhhcCC
Q psy9483 50 YWMNRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHPGLIQDYRGPVYLTPNKREYENLLSG 129 (186)
Q Consensus 50 ~~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~~l~~~~~~~~iiTPh~~E~~rL~~~ 129 (186)
+.++.+|.++++.... . +.+..+ +++. +.|+++|+..... ...+++ +.+.+++||..|+..|++.
T Consensus 136 ~~~~~~~~v~~~~~~~--~---~~~~~~---a~~~--~~~v~~Dp~~~~~--~~~~ll---~~~dil~~N~~E~~~l~g~ 200 (311)
T 1vm7_A 136 NTLSESDILLLQNEIP--F---ETTLEC---AKRF--NGIVIFDPAPAQG--INEEIF---QYLDYLTPNEKEIEALSKD 200 (311)
T ss_dssp HHHTTCSEEEECSSSC--H---HHHHHH---HHHC--CSEEEECCCSCTT--CCGGGG---GGCSEECCBHHHHHHHHHH
T ss_pred hhcccCCEEEEeCCCC--H---HHHHHH---HHHc--CCEEEEeCcchhh--hhHHHH---hhCCEEeCCHHHHHHHhCC
Confidence 3457799999974322 2 222222 3445 7899999985311 111233 3568999999999999974
Q ss_pred -----ChH-HHHH-HHHhCCCEEEEEe-CCee-EEEcCCeEEEEcCCCC-CCCCCChhHHHHhhh
Q psy9483 130 -----SEV-NAAY-IKQGHPNLTVIVK-GHED-VIKNNQISLTCKEGNS-WRRCGGQGDLVAGHR 184 (186)
Q Consensus 130 -----~~~-~~a~-~a~~~~~~~vvlK-G~~~-~I~~~~~~~~~~~g~~-~la~~GsGDvLaGii 184 (186)
++. +.++ +.++.. ..|++| |+.- +++++++.+....... .-.+.|+||.++|.+
T Consensus 201 ~~~~~~~~~~~~~~l~~~g~-~~vvvT~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~ 264 (311)
T 1vm7_A 201 FFGEFLTVEKAAEKFLELGV-KNVIVKLGDKGVLLVNKNEKKHFPTFKVKAVDTTAAGDVFNGAF 264 (311)
T ss_dssp HHSCCCCHHHHHHHHHHTTC-SEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHH
T ss_pred CCCChhHHHHHHHHHHHcCC-CEEEEEECCCCeEEEeCCceEEecCCCcccCCCCccHHHHHHHH
Confidence 223 3566 766653 567777 5543 3455666554443322 236999999998865
No 44
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum}
Probab=97.93 E-value=2.5e-05 Score=65.16 Aligned_cols=124 Identities=19% Similarity=0.225 Sum_probs=75.0
Q ss_pred HhcccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCcccc-cccCCCeEecCCHHHHhhhcC
Q psy9483 50 YWMNRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHPGLI-QDYRGPVYLTPNKREYENLLS 128 (186)
Q Consensus 50 ~~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~~l~-~~~~~~~iiTPh~~E~~rL~~ 128 (186)
+.++.+|.+++|. +. ++. ..++++.+ +. +.++++|+..+.. ....+.+ +..+...|++||..|++.|++
T Consensus 115 ~~~~~~~~v~~~~-~~--~~~---~~~~~~~~-~~--~~~v~~Dp~~~~~-~~~~~~~~~~l~~~dil~~N~~E~~~l~g 184 (313)
T 3kd6_A 115 QYYRDSKFVCLGN-ID--PEL---QLKVLDQI-DD--PKLVVCDTMNFWI-EGKPEELKKVLARVDVFIVNDSEARLLSG 184 (313)
T ss_dssp GGGTTCSEEEECS-SC--HHH---HHHHHTTC-SS--CSEEEEECCHHHH-HHCHHHHHHHHTTCSEEEEEHHHHHHHHS
T ss_pred HHHccCCEEEEcC-CC--HHH---HHHHHHHH-hh--CCEEEEcChhhhh-hhhHHHHHHHHhcCCEEEeCHHHHHHHhC
Confidence 3467899999965 42 322 23344433 23 6789999943321 1111111 223467999999999999999
Q ss_pred CCh-HHHHH-HHHhCCCEEEEEe-CCe-eEEEcCCeEEEEcCCC--CCCCCCChhHHHHhhh
Q psy9483 129 GSE-VNAAY-IKQGHPNLTVIVK-GHE-DVIKNNQISLTCKEGN--SWRRCGGQGDLVAGHR 184 (186)
Q Consensus 129 ~~~-~~~a~-~a~~~~~~~vvlK-G~~-~~I~~~~~~~~~~~g~--~~la~~GsGDvLaGii 184 (186)
.++ .+.++ +.+... ..|++| |+. .+++++++.+....-. ..--+.|+||.++|.+
T Consensus 185 ~~~~~~~~~~l~~~g~-~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~ 245 (313)
T 3kd6_A 185 DPNLVKTARIIREMGP-KTLIIKKGEHGALLFTDNGIFAAPAFPLESIYDPTGAGDTFAGGF 245 (313)
T ss_dssp CSCHHHHHHHHHTTSC-SEEEEECTTSCEEEEETTEEEEECCCTTCCCSCCTTHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCC-CEEEEeeCCCcEEEEECCceEEeCCCCCCCcCCCCCccHHHHHHH
Confidence 843 34666 666442 456665 443 3555666665555432 2346999999998754
No 45
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A*
Probab=97.92 E-value=5.6e-06 Score=70.11 Aligned_cols=131 Identities=13% Similarity=0.067 Sum_probs=78.8
Q ss_pred hcccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCc----cccc-ccCCCeEecCCHHHHhh
Q psy9483 51 WMNRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHP----GLIQ-DYRGPVYLTPNKREYEN 125 (186)
Q Consensus 51 ~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~----~l~~-~~~~~~iiTPh~~E~~r 125 (186)
.++.+|.++++.....++...+.+.++++.+++. +.++++|+.-...+-... +.+. ..+.+.+++||..|+..
T Consensus 138 ~l~~~~~v~~~~~~l~~~~~~~~~~~~~~~a~~~--g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~Ea~~ 215 (339)
T 1tyy_A 138 PFRQYEWFYFSSIGLTDRPAREACLEGARRMREA--GGYVLFDVNLRSKMWGNTDEIPELIARSAALASICKVSADELCQ 215 (339)
T ss_dssp CCCTTCEEEEEHHHHSSHHHHHHHHHHHHHHHHT--TCEEEEECCCCGGGCSCGGGHHHHHHHHHHHCSEEEEEHHHHHH
T ss_pred HhccCCEEEEcchhhcCcccHHHHHHHHHHHHHc--CCEEEEeCCCCccccCCHHHHHHHHHHHHhhCCEEecCHHHHHH
Confidence 3567899999654223444456666777777766 889999996432111110 1111 12356899999999999
Q ss_pred hcCCChH-HHHH-HHHhCCCEEEEEe-CCe-eEEEcCCeEEEEcCC-CCCCCCCChhHHHHhhh
Q psy9483 126 LLSGSEV-NAAY-IKQGHPNLTVIVK-GHE-DVIKNNQISLTCKEG-NSWRRCGGQGDLVAGHR 184 (186)
Q Consensus 126 L~~~~~~-~~a~-~a~~~~~~~vvlK-G~~-~~I~~~~~~~~~~~g-~~~la~~GsGDvLaGii 184 (186)
|++.++. +.++ +.+... ..||+| |+. .+++++++.+....- ...-.+.|+||.++|.+
T Consensus 216 l~g~~~~~~~~~~l~~~g~-~~VvvT~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~ 278 (339)
T 1tyy_A 216 LSGASHWQDARYYLRDLGC-DTTIISLGADGALLITAEGEFHFPAPRVDVVDTTGAGDAFVGGL 278 (339)
T ss_dssp HHCCSSGGGGSSTTGGGTC-SCEEEECGGGCEEEESSSCEEEECCCCCCCSCCTTHHHHHHHHH
T ss_pred HhCCCCHHHHHHHHHHcCC-CEEEEEECCCceEEEeCCceEEcCCCCCCcCCCCCchHHHHHHH
Confidence 9997333 3444 544332 345555 433 345555555444432 22346999999998864
No 46
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*
Probab=97.91 E-value=7.3e-05 Score=62.89 Aligned_cols=127 Identities=22% Similarity=0.260 Sum_probs=75.2
Q ss_pred HhcccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCcccccccCCCeEecCCHHHHhhhcCC
Q psy9483 50 YWMNRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHPGLIQDYRGPVYLTPNKREYENLLSG 129 (186)
Q Consensus 50 ~~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~~l~~~~~~~~iiTPh~~E~~rL~~~ 129 (186)
+.++.+|.+++.--+... ...+.+.++++.+++. ++++++|+..-. + .++++..+.+.+++||..|+..|++.
T Consensus 143 ~~~~~~~~v~~~g~~~~~-~~~~~~~~~~~~a~~~--g~~v~~D~~~~~-l---~~~l~~~~~~dil~~N~~E~~~l~g~ 215 (330)
T 2jg1_A 143 QMMEKVEAVAISGSLPKG-LNQDYYAQIIERCQNK--GVPVILDCSGAT-L---QTVLENPYKPTVIKPNISELYQLLNQ 215 (330)
T ss_dssp HHGGGCSEEEEESCCCBT-SCTTHHHHHHHHHHTT--TCCEEEECCHHH-H---HHHHTSSSCCSEECCBHHHHHHHTTS
T ss_pred HhcCCCCEEEEECCCCCC-CCHHHHHHHHHHHHHC--CCEEEEECCcHH-H---HHHHhccCCceEEEeCHHHHHHHhCC
Confidence 345789999884223211 1113344556666556 789999997421 1 12222102568999999999999987
Q ss_pred --C----hH-HHHH-HHHhCCCEEEEEe-CCee-EEEcCCeEEEEcCCC-CCCCCCChhHHHHhhh
Q psy9483 130 --S----EV-NAAY-IKQGHPNLTVIVK-GHED-VIKNNQISLTCKEGN-SWRRCGGQGDLVAGHR 184 (186)
Q Consensus 130 --~----~~-~~a~-~a~~~~~~~vvlK-G~~~-~I~~~~~~~~~~~g~-~~la~~GsGDvLaGii 184 (186)
+ +. +.++ +.++. -..|++| |+.- +++++++.+...... ..--+.|.||.++|.+
T Consensus 216 ~~~~~~~~~~~~~~~l~~~g-~~~VvvT~G~~Ga~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~ 280 (330)
T 2jg1_A 216 PLDESLESLKQAVSQPLFEG-IEWIIVSLGAQGAFAKHNHTFYRVNIPTISVLNPVGSGDSTVAGI 280 (330)
T ss_dssp CCCCCHHHHHHHHHSGGGTT-CSEEEEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcC-CCEEEEeecCCceEEEeCCCEEEEeCCCccccCCCcHHHHHHHHH
Confidence 2 22 2455 55544 2466666 5543 445556555444322 2346999999998754
No 47
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii}
Probab=97.87 E-value=1.9e-05 Score=66.21 Aligned_cols=131 Identities=12% Similarity=0.097 Sum_probs=74.5
Q ss_pred HhcccCcEEEEcc-CCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccC-c---ccc-cccCCCeEecCCHHHH
Q psy9483 50 YWMNRMHSVLIGP-GLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEH-P---GLI-QDYRGPVYLTPNKREY 123 (186)
Q Consensus 50 ~~~~~~~aivIGp-Glg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~-~---~l~-~~~~~~~iiTPh~~E~ 123 (186)
+.++.+|.+.++. .+. .+...+.+.++++.+++. +.++++|+.....+-.+ . +.+ ...+.+.+++||..|+
T Consensus 140 ~~~~~~~~v~~~g~~l~-~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~ 216 (327)
T 3hj6_A 140 ELIKRSKVFHLSTFILS-RKPARDTAIKAFNYAREQ--GKIVCFDPCYRKVLWPEGDDGAGVVEEIISRADFVKPSLDDA 216 (327)
T ss_dssp HHHC--CEEEEESHHHH-SHHHHHHHHHHHHHHHHT--TCEEEEECCCCGGGSCSSSCSHHHHHHHHTTCSEECCBHHHH
T ss_pred hHhccCCEEEECchHhc-CchhHHHHHHHHHHHHHC--CCEEEEECCCchhhcCCHHHHHHHHHHHHhhCCEEecCHHHH
Confidence 3567789998873 122 233445666777777777 88999999754322111 1 111 1235679999999999
Q ss_pred hhhcCCCh-HHHHH-HHHhCCCEEEEEe-CCe-eEEEcCCeEEEEcCCC-CCCCCCChhHHHHhhh
Q psy9483 124 ENLLSGSE-VNAAY-IKQGHPNLTVIVK-GHE-DVIKNNQISLTCKEGN-SWRRCGGQGDLVAGHR 184 (186)
Q Consensus 124 ~rL~~~~~-~~~a~-~a~~~~~~~vvlK-G~~-~~I~~~~~~~~~~~g~-~~la~~GsGDvLaGii 184 (186)
..|++.++ .+.++ +.+... ..|++| |+. .+++++++.+....-. ....+.|+||.++|.+
T Consensus 217 ~~l~g~~~~~~~~~~l~~~g~-~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~ag~ 281 (327)
T 3hj6_A 217 RHLFGPDSPENYVKRYLELGV-KAVILTLGEEGVIASDGEEIIRIPAFSEDAVDVTGAGDAFWSGF 281 (327)
T ss_dssp HHHHTTSCSSGGGGGGTTTTC-SEEEEECSTTCEEEECSSCEEESCSSTTC-----CCHHHHHHHH
T ss_pred HHHhCCCCHHHHHHHHHhCCC-CEEEEEECCCceEEEeCCeeEEcCCcccccCCCcChhHHHHHHH
Confidence 99999722 23445 554432 345554 443 3455555555444322 2235999999998764
No 48
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125}
Probab=97.83 E-value=5.9e-05 Score=63.10 Aligned_cols=131 Identities=15% Similarity=0.148 Sum_probs=75.8
Q ss_pred hcccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCc----cccc-ccCCCeEecCCHHHHhh
Q psy9483 51 WMNRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHP----GLIQ-DYRGPVYLTPNKREYEN 125 (186)
Q Consensus 51 ~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~----~l~~-~~~~~~iiTPh~~E~~r 125 (186)
.++.+|.+++..=+...+...+.+.++++.+++. +.++++|+..-..+-..+ +.++ ..+...+++||..|+..
T Consensus 135 ~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~ 212 (332)
T 2qcv_A 135 YIRRSKLLLVSGTALSKSPSREAVLKAIRLAKRN--DVKVVFELDYRPYSWETPEETAVYYSLVAEQSDIVIGTREEFDV 212 (332)
T ss_dssp HHTTEEEEEEEGGGGSSTTHHHHHHHHHHHHHHT--TCEEEEECCCCGGGSSCHHHHHHHHHHHHHHCSEEEEEHHHHHH
T ss_pred HHccCCEEEEeCccccCchhHHHHHHHHHHHHHC--CCEEEEcCcCchhhcCCHHHHHHHHHHHHHhCCEEEccHHHHHH
Confidence 3467888887521222222234555666666666 789999997532211111 1111 12346899999999999
Q ss_pred hcCC---Ch-HHHHH-HHHhCCCEEEEEe-CCe-eEEEcC-CeEEEEcC-CCCCCCCCChhHHHHhhh
Q psy9483 126 LLSG---SE-VNAAY-IKQGHPNLTVIVK-GHE-DVIKNN-QISLTCKE-GNSWRRCGGQGDLVAGHR 184 (186)
Q Consensus 126 L~~~---~~-~~~a~-~a~~~~~~~vvlK-G~~-~~I~~~-~~~~~~~~-g~~~la~~GsGDvLaGii 184 (186)
|++. ++ .+.++ +.++.. ..|++| |+. .+++++ ++.+.... ....-.+.|+||.++|.+
T Consensus 213 l~g~~~~~~~~~~~~~l~~~g~-~~vvvt~G~~G~~~~~~~~~~~~~~~~~v~vvdt~GAGDaf~a~~ 279 (332)
T 2qcv_A 213 LENRTEKGDNDETIRYLFKHSP-ELIVIKHGVEGSFAYTKAGEAYRGYAYKTKVLKTFGAGDSYASAF 279 (332)
T ss_dssp HTTCSSCCCHHHHHHHHTTSSC-SEEEEECGGGCEEEEETTSCEEEECCBCCCCSCCTTHHHHHHHHH
T ss_pred HhCCCcCCCHHHHHHHHHHcCC-CEEEEEECCcceEEEecCCceEEcCCCCccccCCCCcHHHHHHHH
Confidence 9986 22 34555 655542 456665 432 344454 44444332 222346999999998865
No 49
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0
Probab=97.82 E-value=0.00018 Score=59.83 Aligned_cols=129 Identities=16% Similarity=0.098 Sum_probs=74.6
Q ss_pred hcccCcEEEEc-cCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCc----ccc-cccCCCeEecCCHHHHh
Q psy9483 51 WMNRMHSVLIG-PGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHP----GLI-QDYRGPVYLTPNKREYE 124 (186)
Q Consensus 51 ~~~~~~aivIG-pGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~----~l~-~~~~~~~iiTPh~~E~~ 124 (186)
.++.+|.++++ .++. .+.....+..+++..+ . +.++++|+.--..+-..+ +.+ +..+...+++||..|+.
T Consensus 132 ~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~-~--~~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~ 207 (319)
T 3pl2_A 132 DVREADILWFTLTGFS-EEPSRGTHREILTTRA-N--RRHTIFDLDYRPMFWESPEEATKQAEWALQHSTVAVGNKEECE 207 (319)
T ss_dssp HHHHCSEEEEEGGGGS-STTHHHHHHHHHHHHT-T--CSCEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEECHHHHH
T ss_pred HhccCCEEEEeccccc-CchhHHHHHHHHHHHH-H--CCcEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEEcCHHHHH
Confidence 45678988885 2222 2223344445554432 3 578999995322111111 111 22346789999999999
Q ss_pred hhcCCCh-HHHHH-HHHhCCCEEEEEe-CCe-eEEEcCCeEEEEcCC-CCCCCCCChhHHHHhhh
Q psy9483 125 NLLSGSE-VNAAY-IKQGHPNLTVIVK-GHE-DVIKNNQISLTCKEG-NSWRRCGGQGDLVAGHR 184 (186)
Q Consensus 125 rL~~~~~-~~~a~-~a~~~~~~~vvlK-G~~-~~I~~~~~~~~~~~g-~~~la~~GsGDvLaGii 184 (186)
.|++.++ .+.++ +.+... ..|++| |+. .+++++++.+....- .....+.|+||.++|.+
T Consensus 208 ~l~g~~~~~~~~~~l~~~g~-~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~ 271 (319)
T 3pl2_A 208 IAVGETEPERAGRALLERGV-ELAIVKQGPKGVMAMTKDETVEVPPFFVDVINGLGAGDAFGGAL 271 (319)
T ss_dssp HHHSCCSHHHHHHHHHHTTC-SEEEEEEETTEEEEECSSCEEEECCCCCCCSCCTTHHHHHHHHH
T ss_pred HHcCCCCHHHHHHHHHhcCC-CEEEEEECCCCeEEEECCceEEeCCcccCCCCCcCchHHHHHHH
Confidence 9999843 34666 666542 345554 443 455565555544432 22346999999998864
No 50
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A*
Probab=97.67 E-value=0.00033 Score=57.95 Aligned_cols=109 Identities=12% Similarity=0.045 Sum_probs=67.5
Q ss_pred HhcccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCcccccccCCCeEecCCHHHHhhhcCC
Q psy9483 50 YWMNRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHPGLIQDYRGPVYLTPNKREYENLLSG 129 (186)
Q Consensus 50 ~~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~~l~~~~~~~~iiTPh~~E~~rL~~~ 129 (186)
+.++.+|.+++..-+ .. +.+.++++.+++. +.++++|+....- ...++ .+...+++||..|++.|++.
T Consensus 127 ~~~~~~~~v~~~g~~--~~---~~~~~~~~~a~~~--g~~v~~D~~~~~~--~~~~l---l~~~dil~~N~~E~~~l~g~ 194 (299)
T 3ikh_A 127 ADAVAGDILLQQGNF--SL---DKTRALFQYARSR--GMTTVFNPSPVNP--DFCHL---WPLIDIAVVNESEAELLQPY 194 (299)
T ss_dssp TTCCTTCEEEECSCS--CH---HHHHHHHHHHHHT--TCEEEECCCSCCG--GGGGC---GGGCSEEEEEHHHHHHHCCC
T ss_pred hhhccCCEEEECCCC--CH---HHHHHHHHHHHHc--CCEEEEccccchh--hHHHH---HhhCCEEEecHHHHHHHhcC
Confidence 346789999997422 22 3344556656666 7899999975421 01122 34568999999999999863
Q ss_pred ChHHHHHHHHhCCCEEEEEe-CCe-eEEEcCCeEEEEcCC-CCCCCCCChhHHHHh
Q psy9483 130 SEVNAAYIKQGHPNLTVIVK-GHE-DVIKNNQISLTCKEG-NSWRRCGGQGDLVAG 182 (186)
Q Consensus 130 ~~~~~a~~a~~~~~~~vvlK-G~~-~~I~~~~~~~~~~~g-~~~la~~GsGDvLaG 182 (186)
+-..|++| |+. .+++++++.+....- ...--+.|+||.++|
T Consensus 195 ------------g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaf~a 238 (299)
T 3ikh_A 195 ------------GVKTLVITQGAAGAWLVQEGQRQFCPAVPAEALDTTGAGDTFLA 238 (299)
T ss_dssp ------------SCSEEEEECGGGCEEEECSSCEEEECCCCCCCSCCTTHHHHHHH
T ss_pred ------------CCCEEEEEECCCceEEEeCCceEEeCCCCCccCCCCCchHHHHH
Confidence 11344554 333 345555555444432 223469999999987
No 51
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1
Probab=97.64 E-value=0.00015 Score=60.88 Aligned_cols=127 Identities=9% Similarity=0.132 Sum_probs=74.2
Q ss_pred HhcccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCcccccccCCCeEecCCHHH-HhhhcC
Q psy9483 50 YWMNRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHPGLIQDYRGPVYLTPNKRE-YENLLS 128 (186)
Q Consensus 50 ~~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~~l~~~~~~~~iiTPh~~E-~~rL~~ 128 (186)
+.++.+|.+++..-+... ...+.+.++++.+++. ++++++|+.+-. + .++++..+.+.+++||..| +..|++
T Consensus 142 ~~~~~~~~v~~~g~~~~~-~~~~~~~~~~~~a~~~--g~~v~~D~~~~~-~---~~~l~~~~~~dil~~N~~E~~~~l~g 214 (331)
T 2ajr_A 142 MTLSKVDCVVISGSIPPG-VNEGICNELVRLARER--GVFVFVEQTPRL-L---ERIYEGPEFPNVVKPDLRGNHASFLG 214 (331)
T ss_dssp HHHTTCSEEEEESCCCTT-SCTTHHHHHHHHHHHT--TCEEEEECCHHH-H---HHHHHSSCCCSEECCCCTTCCSCBTT
T ss_pred HhcccCCEEEEECCCCCC-CCHHHHHHHHHHHHHc--CCEEEEECChHH-H---HHHHhcCCCCeEEEeCccchHHHHhC
Confidence 345789999995223221 0113344555555556 789999997521 1 1222211236899999999 999998
Q ss_pred CC-----hH-HHHH-HHHhCCCEEEEEeCCee-EEEcCCeEEEEc-CC-CCCCCCCChhHHHHhhh
Q psy9483 129 GS-----EV-NAAY-IKQGHPNLTVIVKGHED-VIKNNQISLTCK-EG-NSWRRCGGQGDLVAGHR 184 (186)
Q Consensus 129 ~~-----~~-~~a~-~a~~~~~~~vvlKG~~~-~I~~~~~~~~~~-~g-~~~la~~GsGDvLaGii 184 (186)
.+ +. +.++ +.++. ..+||=.|+.- ++++++..+... .- ....-+.|.||.++|.+
T Consensus 215 ~~~~~~~~~~~~~~~l~~~~-~~vvvT~G~~Ga~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~ 279 (331)
T 2ajr_A 215 VDLKTFDDYVKLAEKLAEKS-QVSVVSYEVKNDIVATREGVWLIRSKEEIDTSHLLGAGDAYVAGM 279 (331)
T ss_dssp BCCCSHHHHHHHHHHHHHHS-SEEEEEETTTEEEEECSSCEEEEEESSCCCGGGCTTHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhc-CEEEEeecCCceEEEeCCcEEEEecCCcccccCCCchHHHHHHHH
Confidence 61 22 2455 55554 35444446543 445555544443 21 22235999999998754
No 52
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A*
Probab=97.59 E-value=0.00063 Score=56.81 Aligned_cols=130 Identities=17% Similarity=0.122 Sum_probs=72.0
Q ss_pred hcccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCcc-cccccCCCeEecCCHHHHhhhcCC
Q psy9483 51 WMNRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHPG-LIQDYRGPVYLTPNKREYENLLSG 129 (186)
Q Consensus 51 ~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~~-l~~~~~~~~iiTPh~~E~~rL~~~ 129 (186)
.++.++.+.+.-=+.......+.+.++++.+++. + .+++|...-..+....+ +.+..+...+++||..|+..|++.
T Consensus 132 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~--~-~~~~d~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~ 208 (325)
T 3h49_A 132 RFSQAKLLSLASIFNSPLLDGKALTEIFTQAKAR--Q-MIICADMIKPRLNETLDDICEALSYVDYLFPNFAEAKLLTGK 208 (325)
T ss_dssp GGGGCSEEEEEEETTSTTSCHHHHHHHHHHHHHT--T-CEEEEEECCCSSCCCHHHHHHHHTTCSEEECBHHHHHHHHTC
T ss_pred hhccCCEEEEecccCCcccCHHHHHHHHHHHHhc--C-CEEEecCCchhhhhHHHHHHHHHhhCCEEecCHHHHHHHhCC
Confidence 3566888877631111110113345556655555 5 57777422111111111 112234578999999999999998
Q ss_pred ChH-HHHH-HHHhCCCEEEEEe-CCe-eEEEcCCeEEEEcCCC--CCCCCCChhHHHHhhh
Q psy9483 130 SEV-NAAY-IKQGHPNLTVIVK-GHE-DVIKNNQISLTCKEGN--SWRRCGGQGDLVAGHR 184 (186)
Q Consensus 130 ~~~-~~a~-~a~~~~~~~vvlK-G~~-~~I~~~~~~~~~~~g~--~~la~~GsGDvLaGii 184 (186)
++. +.++ +.+... ..|++| |+. .+++++++.+....-. ..--+.|+||.++|.+
T Consensus 209 ~~~~~~~~~l~~~g~-~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvDttGAGDaf~ag~ 268 (325)
T 3h49_A 209 ETLDEIADCFLACGV-KTVVIKTGKDGCFIKRGDMTMKVPAVAGITAIDTIGAGDNFASGF 268 (325)
T ss_dssp SSHHHHHHHHHTTTC-SEEEEECTTSCEEEEETTEEEEECCCSSCCCSCCTTHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCC-CEEEEEeCCCCeEEEECCeEEEecCcCCCCCcCCCChhHHHHHHH
Confidence 433 4566 655442 345554 443 3555666655554332 2346999999998754
No 53
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A
Probab=97.57 E-value=4.7e-05 Score=63.02 Aligned_cols=120 Identities=17% Similarity=0.072 Sum_probs=69.7
Q ss_pred ccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCcccc-cccCCCeEecCCHHHHhhhcCCCh
Q psy9483 53 NRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHPGLI-QDYRGPVYLTPNKREYENLLSGSE 131 (186)
Q Consensus 53 ~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~~l~-~~~~~~~iiTPh~~E~~rL~~~~~ 131 (186)
+.+|.++++... + +.+.++++.+++. + ++++|+..-... ...+.+ +..+...+++||..|+..|++.+.
T Consensus 129 ~~~~~v~~~~~~---~---~~~~~~~~~a~~~--g-~v~~D~~~~~~~-~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~ 198 (302)
T 2c4e_A 129 FNTEIVHIATGD---P---EFNLKCAKKAYGN--N-LVSFDPGQDLPQ-YSKEMLLEIIEHTNFLFMNKHEFERASNLLN 198 (302)
T ss_dssp CCEEEEEECSSC---H---HHHHHHHHHHBTT--B-EEEECCGGGGGG-CCHHHHHHHHHTCSEEEEEHHHHHHHHHHHT
T ss_pred ccCCEEEEeCCC---c---HHHHHHHHHHHhc--C-CEEEeCchhhhh-hhHHHHHHHHhcCCEEEcCHHHHHHHhCCCC
Confidence 468899997632 2 3445566666555 7 999999842111 111111 122456899999999999987511
Q ss_pred HHHHHHHHhCCCEEEEEe-CCe-eEEEcCCeEEEEcCCC-C-CCCCCChhHHHHhhh
Q psy9483 132 VNAAYIKQGHPNLTVIVK-GHE-DVIKNNQISLTCKEGN-S-WRRCGGQGDLVAGHR 184 (186)
Q Consensus 132 ~~~a~~a~~~~~~~vvlK-G~~-~~I~~~~~~~~~~~g~-~-~la~~GsGDvLaGii 184 (186)
.+..++.++. ..|++| |+. .+++++++.+....-. . ..-+.|+||.++|.+
T Consensus 199 ~~~~~l~~~~--~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~~vdt~GAGDaf~a~~ 253 (302)
T 2c4e_A 199 FEIDDYLERV--DALIVTKGSKGSVIYTKDKKIEIPCIKAGKVIDPTGAGDSYRAGF 253 (302)
T ss_dssp CCHHHHHTTC--SEEEEECGGGCEEEECSSCEEEECCCCCSCCSCCTTHHHHHHHHH
T ss_pred ccHHHHHhcC--CEEEEEECCCceEEEeCCcEEEeCCccCCcCCcCCCchHHHHHHH
Confidence 1111533333 355665 443 3455555554444322 2 346999999998754
No 54
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A*
Probab=97.57 E-value=0.00019 Score=61.47 Aligned_cols=131 Identities=12% Similarity=0.043 Sum_probs=77.2
Q ss_pred HhcccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCcc-cccccCCCeEecCCHHHHhhhcC
Q psy9483 50 YWMNRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHPG-LIQDYRGPVYLTPNKREYENLLS 128 (186)
Q Consensus 50 ~~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~~-l~~~~~~~~iiTPh~~E~~rL~~ 128 (186)
+.++.+|.++++- .... ...+.+.++++.+++. ++++++|+.+-.......+ +....+...+|+||..|+..|++
T Consensus 174 ~~~~~~~~v~~~g-~~~~-~~~~~~~~~~~~a~~~--g~~v~ld~~~~~~~~~~~~~l~~ll~~~dil~~N~~Ea~~l~g 249 (370)
T 3vas_A 174 SLVEKAQVYYIAG-FVIN-TCYEGMLKIAKHSLEN--EKLFCFNLSAPFLSQFNTKEVDEMISYSNIVFGNESEAEAYGE 249 (370)
T ss_dssp HHHHHCSEEEEEG-GGHH-HHHHHHHHHHHHHHHT--TCEEEEECCCHHHHHHCHHHHHHHHTTCSEEEEEHHHHHHHHH
T ss_pred HHHhhCCEEEEEe-eecc-CCHHHHHHHHHHHHHc--CCEEEEECCcHHHHHHHHHHHHHHHhhCCEEEcCHHHHHHHhc
Confidence 4567899999952 1111 1234566677777666 7899999965321111111 11123456899999999999987
Q ss_pred C-----ChHH-HHH-HHHh-----C-CCEEEEE-eCCe-eEEEc--CCeEEEEcCCC----CCCCCCChhHHHHhhh
Q psy9483 129 G-----SEVN-AAY-IKQG-----H-PNLTVIV-KGHE-DVIKN--NQISLTCKEGN----SWRRCGGQGDLVAGHR 184 (186)
Q Consensus 129 ~-----~~~~-~a~-~a~~-----~-~~~~vvl-KG~~-~~I~~--~~~~~~~~~g~----~~la~~GsGDvLaGii 184 (186)
. ++.+ .++ +.+. . +...||+ .|+. .++++ +++.+....-. ...-+.|.||.++|-+
T Consensus 250 ~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~ag~ 326 (370)
T 3vas_A 250 VHGLLEDTVHATARYIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFAAGF 326 (370)
T ss_dssp HTTCCSSHHHHHHHHHHHSCCTTCCCCCCEEEEEETTEEEEEEETTCSSCEEECCCCCCTTTCSCCTTHHHHHHHHH
T ss_pred ccCCCccCHHHHHHHHHhhcccccccCCCEEEEecCCCceEEEEcCCCeEEEEecccccCCCcCCCCChHHHHHHHH
Confidence 5 3333 566 7663 1 2234555 4554 34555 55544443322 2346999999998764
No 55
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A
Probab=97.57 E-value=0.00037 Score=57.64 Aligned_cols=128 Identities=14% Similarity=0.090 Sum_probs=74.1
Q ss_pred hcccCcEEEEccCCC-CCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccC---cccc-cccCCCeEecCCHHHHhh
Q psy9483 51 WMNRMHSVLIGPGLG-TEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEH---PGLI-QDYRGPVYLTPNKREYEN 125 (186)
Q Consensus 51 ~~~~~~aivIGpGlg-~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~---~~l~-~~~~~~~iiTPh~~E~~r 125 (186)
.++.+|.+.++.=.. .++...+.+.++++.+++. +.++++|+..-..+-.. .+.+ +..+...+++||..|+..
T Consensus 122 ~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~ 199 (309)
T 1v1a_A 122 YLEGVRFLHLSGITPALSPEARAFSLWAMEEAKRR--GVRVSLDVNYRQTLWSPEEARGFLERALPGVDLLFLSEEEAEL 199 (309)
T ss_dssp GGTTCSEEEEETTGGGSCHHHHHHHHHHHHHHHTT--TCEEEEECCCCTTTSCHHHHHHHHHHHGGGCSEEEEEHHHHHH
T ss_pred HhcCCCEEEEeCchhccCchHHHHHHHHHHHHHHc--CCEEEEeCCCCcccCCHHHHHHHHHHHHHhCCEEECcHHHHHH
Confidence 456799998853221 2344556677777777666 78999999753211110 0111 123456899999999999
Q ss_pred hcCCChHHHHHHHHhCCCEEEEEe-CCee-EEEcCCeEEEEcCCC-CCCCCCChhHHHHhhh
Q psy9483 126 LLSGSEVNAAYIKQGHPNLTVIVK-GHED-VIKNNQISLTCKEGN-SWRRCGGQGDLVAGHR 184 (186)
Q Consensus 126 L~~~~~~~~a~~a~~~~~~~vvlK-G~~~-~I~~~~~~~~~~~g~-~~la~~GsGDvLaGii 184 (186)
|++.+ .+.++ +++-..|++| |+.- ++..+++.+....-. ....+.|+||.++|.+
T Consensus 200 l~g~~-~~~~~---~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~ 257 (309)
T 1v1a_A 200 LFGRV-EEALR---ALSAPEVVLKRGAKGAWAFVDGRRVEGSAFAVEAVDPVGAGDAFAAGY 257 (309)
T ss_dssp HHSSH-HHHHH---HTCCSEEEEECGGGCEEEEETTEEEECCCCCCCCSCCTTHHHHHHHHH
T ss_pred HhCCH-HHHHH---hcCCCEEEEEecCCCeeEecCCcEEEeCCCCCCcCCCCCchHHHHHHH
Confidence 99853 11222 4422356665 4322 332225544443221 2246999999998754
No 56
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A*
Probab=97.47 E-value=0.00051 Score=57.75 Aligned_cols=122 Identities=15% Similarity=0.115 Sum_probs=70.6
Q ss_pred cccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCcccccccCCCeEecCCHHHHhhhcCC-C
Q psy9483 52 MNRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHPGLIQDYRGPVYLTPNKREYENLLSG-S 130 (186)
Q Consensus 52 ~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~~l~~~~~~~~iiTPh~~E~~rL~~~-~ 130 (186)
++.+|.++++.-. . +.+.++++.+++. +.++++|+.....+-....+.+..+...+++||..|+..|++. .
T Consensus 146 l~~~~~v~~~~~~---~---~~~~~~~~~a~~~--g~~v~~D~~~~~~~~~~~~l~~~l~~~dil~~N~~E~~~l~g~~~ 217 (334)
T 2pkf_A 146 IGKPELVIIGAND---P---EAMFLHTEECRKL--GLAFAADPSQQLARLSGEEIRRLVNGAAYLFTNDYEWDLLLSKTG 217 (334)
T ss_dssp HCSCSEEEEESCC---H---HHHHHHHHHHHHH--TCCEEEECGGGGGTSCHHHHHTTTTTCSEEEEEHHHHHHHHHHHC
T ss_pred hcCCCEEEEcCCC---h---HHHHHHHHHHHhc--CCeEEEeccchhhhhhHHHHHHHHhcCCEEecCHHHHHHHhccCC
Confidence 4789999997532 2 2344455555556 7899999965321111111112234568999999999999874 1
Q ss_pred hHHHHHHHHhCCCEEEEEe-CCe-eEEEcCCe-EEEEcCCCC--CCCCCChhHHHHhhh
Q psy9483 131 EVNAAYIKQGHPNLTVIVK-GHE-DVIKNNQI-SLTCKEGNS--WRRCGGQGDLVAGHR 184 (186)
Q Consensus 131 ~~~~a~~a~~~~~~~vvlK-G~~-~~I~~~~~-~~~~~~g~~--~la~~GsGDvLaGii 184 (186)
. +..++.+.. ..|++| |+. .++++++. .+....-.. -.-+.|+||.++|.+
T Consensus 218 ~-~~~~l~~~~--~~vvvt~G~~G~~~~~~~~~~~~~~~~~v~~vvDttGAGDaF~a~~ 273 (334)
T 2pkf_A 218 W-SEADVMAQI--DLRVTTLGPKGVDLVEPDGTTIHVGVVPETSQTDPTGVGDAFRAGF 273 (334)
T ss_dssp C-CHHHHHTTC--SCEEEECGGGCEEEECTTSCEEEECCCCCSCCCCCTTHHHHHHHHH
T ss_pred C-CHHHHHhcC--CEEEEEeCCCCeEEEeCCCcEEEeCCcCCCCCCCCCCchHHHHHHH
Confidence 1 111244444 345555 443 34455544 554443222 247999999998754
No 57
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A*
Probab=97.47 E-value=0.00023 Score=59.83 Aligned_cols=131 Identities=14% Similarity=0.122 Sum_probs=75.4
Q ss_pred HHhcccCcEEEEc-cCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCcccc-cccCCCeEecCCHHHHhhh
Q psy9483 49 MYWMNRMHSVLIG-PGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHPGLI-QDYRGPVYLTPNKREYENL 126 (186)
Q Consensus 49 ~~~~~~~~aivIG-pGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~~l~-~~~~~~~iiTPh~~E~~rL 126 (186)
.+.++.+|.++++ .-+.... +.+..+++.+++. ++++++|+.+-..-....+.+ +..+...+|+||..|+..|
T Consensus 156 ~~~~~~~~~v~~~g~~~~~~~---~~~~~~~~~a~~~--g~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l 230 (345)
T 1bx4_A 156 WMLVEKARVCYIAGFFLTVSP---ESVLKVAHHASEN--NRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATF 230 (345)
T ss_dssp HHHHHHCSEEEEEGGGGGTCH---HHHHHHHHHHHHT--TCEEEEECCSHHHHHHTHHHHHHHGGGCSEEEEEHHHHHHH
T ss_pred HHHHhhCCEEEEEEEeccCCH---HHHHHHHHHHHHc--CCEEEEeCCcHHHHHHHHHHHHHHhccCCEEeCCHHHHHHH
Confidence 4456679999984 2222233 3344556666666 789999997532111111111 1223568999999999999
Q ss_pred cCC-----ChH-HHHH-HHHh-----CCCEEEEEe-CCee-EEEcCCeEEEEcCCC----CCCCCCChhHHHHhhh
Q psy9483 127 LSG-----SEV-NAAY-IKQG-----HPNLTVIVK-GHED-VIKNNQISLTCKEGN----SWRRCGGQGDLVAGHR 184 (186)
Q Consensus 127 ~~~-----~~~-~~a~-~a~~-----~~~~~vvlK-G~~~-~I~~~~~~~~~~~g~----~~la~~GsGDvLaGii 184 (186)
++. ++. +.++ +.+. .+...|++| |+.- +++++++.+....-. ..--+.|+||.++|.+
T Consensus 231 ~g~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaf~ag~ 306 (345)
T 1bx4_A 231 AREQGFETKDIKEIAKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVGGF 306 (345)
T ss_dssp HHHTTCCCCCHHHHHHHHHTSCCSCTTSCCEEEEEETTEEEEEECSSCEEEECCCCCCCTTCCCHHHHHHHHHHHH
T ss_pred hcccCCCCCCHHHHHHHHHhcccccccCCCEEEEEeCCCCeEEEECCeEEEEeccccCcCccccCCCcchHHHHHH
Confidence 763 233 3566 6662 222355555 5543 445555555444321 2346899999998754
No 58
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A*
Probab=97.43 E-value=0.00046 Score=57.56 Aligned_cols=114 Identities=11% Similarity=0.064 Sum_probs=69.9
Q ss_pred HHhcccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCcccccccCCCeEecCCHHHHhhhcC
Q psy9483 49 MYWMNRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHPGLIQDYRGPVYLTPNKREYENLLS 128 (186)
Q Consensus 49 ~~~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~~l~~~~~~~~iiTPh~~E~~rL~~ 128 (186)
.+.++.+|.+++...+ .. +.+.++++.+++. +.++++|+.....+. ..+....+...+++||..|++.|++
T Consensus 138 ~~~l~~~~~v~~~~~~--~~---~~~~~~~~~a~~~--g~~v~~D~~~~~~~~--~~~~~ll~~~dil~~N~~Ea~~l~g 208 (310)
T 3go6_A 138 PSAVANCDVLLTQLEI--PV---ATALAAARAAQSA--DAVVMVNASPAGQDR--SSLQDLAAIADVVIANEHEANDWPS 208 (310)
T ss_dssp TTTTTTCSEEEECSSS--CH---HHHHHHHHHHHHT--TCEEEEECCSSSCCH--HHHHHHHHHCSEEEEEHHHHHHSSS
T ss_pred HHHhhcCCEEEECCCC--CH---HHHHHHHHHHHHc--CCEEEEcCCccccch--HHHHHHHhhCCEEEeCHHHHHHHhC
Confidence 4456789999997432 22 3344555556566 789999997432211 1011112346899999999999997
Q ss_pred CChHHHHHHHHhCCCEEEEEe-CCe-eEEEcCCeEEEEcCCC-CCCCCCChhHHHHhhh
Q psy9483 129 GSEVNAAYIKQGHPNLTVIVK-GHE-DVIKNNQISLTCKEGN-SWRRCGGQGDLVAGHR 184 (186)
Q Consensus 129 ~~~~~~a~~a~~~~~~~vvlK-G~~-~~I~~~~~~~~~~~g~-~~la~~GsGDvLaGii 184 (186)
. . ..|++| |+. .+++++++.+....-. ..--+.|+||.++|.+
T Consensus 209 ~-----------~--~~vvvt~G~~Ga~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~ 254 (310)
T 3go6_A 209 P-----------P--THFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVL 254 (310)
T ss_dssp C-----------C--SEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHH
T ss_pred C-----------C--CEEEEEECCCCEEEEECCceEEeCCCCCCcCcCCCchHHHHHHH
Confidence 3 1 345554 443 3455566655554322 2346999999998754
No 59
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A*
Probab=97.30 E-value=0.00074 Score=57.79 Aligned_cols=132 Identities=14% Similarity=0.099 Sum_probs=74.7
Q ss_pred HHHhcccCcEEEEc-cCCCCCHHHHHHHHHHHHHHHh-cCCCCCEEEecccccccccCccccc-ccCCCeEecCCHHHHh
Q psy9483 48 IMYWMNRMHSVLIG-PGLGTEPLVQSNVISIIHKLKA-ANLNVPLVIDADGLKLVAEHPGLIQ-DYRGPVYLTPNKREYE 124 (186)
Q Consensus 48 ~~~~~~~~~aivIG-pGlg~~~~~~~~~~~~l~~~~~-~~~~~p~VlDadal~~l~~~~~l~~-~~~~~~iiTPh~~E~~ 124 (186)
..+.++.+|.++++ .-+.... +.+..+++.+++ . ++++++|+.+-.......+.++ ..+...||+||..|+.
T Consensus 174 ~~~~l~~~~~v~~~g~~~~~~~---~~~~~~~~~a~~~~--g~~v~~d~~~~~~~~~~~~~l~~ll~~~dil~pN~~Ea~ 248 (383)
T 2abs_A 174 WTTFASGALIFYATAYTLTATP---KNALEVAGYAHGIP--NAIFTLNLSAPFCVELYKDAMQSLLLHTNILFGNEEEFA 248 (383)
T ss_dssp HHHHTTTCCEEEEEGGGGTTCH---HHHHHHHHHHHTST--TCEEEEECCCHHHHHHCHHHHHHHHHTCSEEEEEHHHHH
T ss_pred hHHHhhcCCEEEEeeecccCCH---HHHHHHHHHHHHhc--CCEEEEeCCcHHHHHHHHHHHHHHHhhCCEEeCCHHHHH
Confidence 34457789999984 2222233 345566666665 5 7889999875322111111111 1235689999999999
Q ss_pred hhcCC---C------------h--H-HHHH-HHHh-----C-CCEEEEEe-CCe-eEEE-----cCCeEEEEcCCC----
Q psy9483 125 NLLSG---S------------E--V-NAAY-IKQG-----H-PNLTVIVK-GHE-DVIK-----NNQISLTCKEGN---- 168 (186)
Q Consensus 125 rL~~~---~------------~--~-~~a~-~a~~-----~-~~~~vvlK-G~~-~~I~-----~~~~~~~~~~g~---- 168 (186)
.|++. + + . +.++ +.+. . +-..||+| |+. .+++ ++++.+....-.
T Consensus 249 ~L~g~~~~~~~~~~~~s~~~~~~~~~~~a~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~v~~~ 328 (383)
T 2abs_A 249 HLAKVHNLVAAEKTALSTANKEHAVEVCTGALRLLTAGQNTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAE 328 (383)
T ss_dssp HHHHHHTCC----------CHHHHHHHHHHHHHHHHTTCCCSSCCEEEEECTTSCEEEEEECTTSCEEEEEECCCCCCGG
T ss_pred HHhcccCcccccccccccccccccHHHHHHHHHhccccccccCCCEEEEEcCCCCeEEEEeecCCCCeEEEecCccCCcC
Confidence 99753 1 1 1 2455 5552 1 22456665 443 3444 444444443221
Q ss_pred CCCCCCChhHHHHhhh
Q psy9483 169 SWRRCGGQGDLVAGHR 184 (186)
Q Consensus 169 ~~la~~GsGDvLaGii 184 (186)
..-.+.|+||.++|.+
T Consensus 329 ~vvDttGAGDaF~ag~ 344 (383)
T 2abs_A 329 KIVDTNGAGDAFVGGF 344 (383)
T ss_dssp GCCCCTTHHHHHHHHH
T ss_pred CcCcCCChHHHHHHHH
Confidence 2346999999998865
No 60
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1
Probab=97.28 E-value=0.00049 Score=56.88 Aligned_cols=123 Identities=15% Similarity=0.109 Sum_probs=69.2
Q ss_pred ccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEeccccc-cc-----c-cC-cccccccCCCeEecCCHHHHh
Q psy9483 53 NRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLK-LV-----A-EH-PGLIQDYRGPVYLTPNKREYE 124 (186)
Q Consensus 53 ~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~-~l-----~-~~-~~l~~~~~~~~iiTPh~~E~~ 124 (186)
..++.+.+|. +...+... ++++.+++. +.++++|+.+.. .+ . .. ..+.+..+...+++||..|+.
T Consensus 118 ~~~~~v~~~~-~~~~~~~~----~~~~~~~~~--g~~v~~D~~~~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~ 190 (298)
T 1vk4_A 118 IEGEAVHINP-LWYGEFPE----DLIPVLRRK--VMFLSADAQGFVRVPENEKLVYRDWEMKEKYLKYLDLFKVDSREAE 190 (298)
T ss_dssp CCSSEEEECC-SSTTSSCG----GGHHHHHHH--CSEEEEETHHHHEEEETTEEEECCCTTHHHHGGGCSEEEEEHHHHH
T ss_pred CCCCEEEECC-cccccccH----HHHHHHHHc--CCEEEEecCccccccccccccccchHHHHhhcccCCEEecCHHHHH
Confidence 4689999875 32222111 223333345 789999997521 11 0 00 011111235689999999999
Q ss_pred hhcCCChH-HHHH-HHHhCCCEEEEEeC-CeeEEEcCCeEEEEcCC-CCCCCCCChhHHHHhhh
Q psy9483 125 NLLSGSEV-NAAY-IKQGHPNLTVIVKG-HEDVIKNNQISLTCKEG-NSWRRCGGQGDLVAGHR 184 (186)
Q Consensus 125 rL~~~~~~-~~a~-~a~~~~~~~vvlKG-~~~~I~~~~~~~~~~~g-~~~la~~GsGDvLaGii 184 (186)
.|++.++. +.++ +.+... ..||+|. ...+++++ ..+....- ...--+.|+||.++|.+
T Consensus 191 ~l~g~~~~~~~~~~l~~~g~-~~vvvT~~~G~~~~~~-~~~~~~~~~v~vvDttGAGDaF~a~~ 252 (298)
T 1vk4_A 191 TLTGTNDLRESCRIIRSFGA-KIILATHASGVIVFDG-NFYEASFRSWSLEGRTGRGDTCTAAF 252 (298)
T ss_dssp HHHSCSCHHHHHHHHHHTTC-SSEEEEETTEEEEESS-SEEEEECCCSSGGGGTTHHHHHHHHH
T ss_pred HHhCCCCHHHHHHHHHhcCC-CEEEEEcCCCcEEEeC-CEEEeccCCcccCCCcCccHHHHHHH
Confidence 99998433 4566 655432 3455553 33455555 44444321 11235899999998864
No 61
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A*
Probab=97.27 E-value=0.00097 Score=56.07 Aligned_cols=130 Identities=14% Similarity=0.096 Sum_probs=76.3
Q ss_pred HhcccCcEEEEcc-CCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCcc-cccccCCCeEecCCHHHHhhhc
Q psy9483 50 YWMNRMHSVLIGP-GLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHPG-LIQDYRGPVYLTPNKREYENLL 127 (186)
Q Consensus 50 ~~~~~~~aivIGp-Glg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~~-l~~~~~~~~iiTPh~~E~~rL~ 127 (186)
+.++.++.+++.- -+.... +.+.++++.+++. ++++++|+..-.......+ +.+..+...+++||..|++.|+
T Consensus 158 ~~~~~~~~~~~~g~~~~~~~---~~~~~~~~~a~~~--g~~v~~d~~~~~~~~~~~~~l~~~l~~~dil~~N~~Ea~~l~ 232 (347)
T 3otx_A 158 RAMDESRIFYFSGFTLTVDV---NHVLQACRKAREV--DGLFMINLSAPFIMQFFSAQLGEVLPYTDIIVANRHEAKEFA 232 (347)
T ss_dssp HHHHHCSEEEEEGGGGGTCH---HHHHHHHHHHHHT--TCEEEEECCCHHHHHHCHHHHHHHGGGCSEEEEEHHHHHHHH
T ss_pred HHHhhCCEEEEeeeecccCH---HHHHHHHHHHHHh--CCEEEeeCchhhhHHHHHHHHHHHHhhCCEEecCHHHHHHHh
Confidence 4567899999951 111223 3455666666666 7899999974322111111 1122235689999999999998
Q ss_pred CC-----ChH-HHHH-HHH------hCCCEEEEEeCCee-EEEcCCeEEEEcCCC----CCCCCCChhHHHHhhh
Q psy9483 128 SG-----SEV-NAAY-IKQ------GHPNLTVIVKGHED-VIKNNQISLTCKEGN----SWRRCGGQGDLVAGHR 184 (186)
Q Consensus 128 ~~-----~~~-~~a~-~a~------~~~~~~vvlKG~~~-~I~~~~~~~~~~~g~----~~la~~GsGDvLaGii 184 (186)
+. ++. +.++ +.+ .....+||=.|+.- +++++++.+....-. ..--+.|.||.++|-+
T Consensus 233 ~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~ag~ 307 (347)
T 3otx_A 233 NMMKWDTDCVEEIARRAVSEVPYTGTKGRVVVFTRDIESTVLATKDGVETVPVPQLDQDKVIDMNGAGDAFMGGF 307 (347)
T ss_dssp HHHTCCCCCHHHHHHHHHHTSCCCCSSCCEEEEEETTEEEEEEETTEEEEECCCCCCGGGCCSSCCSHHHHHHHH
T ss_pred cccCCCcCCHHHHHHHHHhhhccccCCCCEEEEEeCCCCeEEEECCeEEEEEecccCCCCCCCCCChHHHHHHHH
Confidence 64 233 3566 663 22123444446653 455666655443322 2246999999998754
No 62
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A*
Probab=97.16 E-value=0.0011 Score=54.82 Aligned_cols=126 Identities=13% Similarity=0.102 Sum_probs=72.6
Q ss_pred hcccCcEEEEcc-CCCCCHHHHHHHHHHHHHHHhcCCCCCEEEeccccccccc-C--cccc-cccC--CCeEecCCHHHH
Q psy9483 51 WMNRMHSVLIGP-GLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAE-H--PGLI-QDYR--GPVYLTPNKREY 123 (186)
Q Consensus 51 ~~~~~~aivIGp-Glg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~-~--~~l~-~~~~--~~~iiTPh~~E~ 123 (186)
.++.+|.+.++. .+..++...+.+.++++.+ +.. ++|+..-..+-. . .+.+ +..+ ...+++||..|+
T Consensus 125 ~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a-----~~~-~~D~~~~~~~~~~~~~~~~~~~~l~~~~~dil~~N~~E~ 198 (311)
T 2dcn_A 125 YVKSADLVHSSGITLAISSTAKEAVYKAFEIA-----SNR-SFDTNIRLKLWSAEEAKREILKLLSKFHLKFLITDTDDS 198 (311)
T ss_dssp HHTTCSEEEEEHHHHHSCHHHHHHHHHHHHHC-----SSE-EEECCCCTTTSCHHHHHHHHHHHHHHCCEEEEEEEHHHH
T ss_pred HHcCCCEEEEeCcccccChHHHHHHHHHHHHH-----HHh-CcCccCchhhCChHHHHHHHHHHHhhcCCcEEECCHHHH
Confidence 456799998852 1112343445566666543 333 899975321110 0 0111 1234 568999999999
Q ss_pred hhhcCCChH-HHHH-HHHhCCCEEEEEe-CCe-eEEEcCCeEEEEcCC-CCCCCCCChhHHHHhhh
Q psy9483 124 ENLLSGSEV-NAAY-IKQGHPNLTVIVK-GHE-DVIKNNQISLTCKEG-NSWRRCGGQGDLVAGHR 184 (186)
Q Consensus 124 ~rL~~~~~~-~~a~-~a~~~~~~~vvlK-G~~-~~I~~~~~~~~~~~g-~~~la~~GsGDvLaGii 184 (186)
..|++.++. +.++ +.+. . ..|++| |+. .+++++++.+....- ....-+.|+||.++|.+
T Consensus 199 ~~l~g~~~~~~~~~~l~~~-~-~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~ 262 (311)
T 2dcn_A 199 KIILGESDPDKAAKAFSDY-A-EIIVMKLGPKGAIVYYDGKKYYSSGYQVPVEDVTGAGDALGGTF 262 (311)
T ss_dssp HHHHSCCCHHHHHHHHTTT-E-EEEEEEEETTEEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHH
T ss_pred HHHhCCCCHHHHHHHHHHh-C-CEEEEEECCCCcEEEeCCcEEEeCCccccccCCCCchHHHHHHH
Confidence 999997433 4555 6554 3 455555 443 345556655544432 22346999999998754
No 63
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A*
Probab=97.06 E-value=0.0012 Score=54.58 Aligned_cols=127 Identities=13% Similarity=0.036 Sum_probs=71.8
Q ss_pred hcccCcEEEEccCCC-CCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCc----cccc-ccCCCe--EecCCHHH
Q psy9483 51 WMNRMHSVLIGPGLG-TEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHP----GLIQ-DYRGPV--YLTPNKRE 122 (186)
Q Consensus 51 ~~~~~~aivIGpGlg-~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~----~l~~-~~~~~~--iiTPh~~E 122 (186)
.++.+|.+.++.=.. .++...+.+.++++.+ +.. ++|+..-..+-... +.+. ..+... +++||..|
T Consensus 125 ~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a-----~~~-~~D~~~~~~~~~~~~~~~~~~~~~l~~~d~~il~~N~~E 198 (313)
T 2v78_A 125 YVRNSRLVHSTGITLAISDNAKEAVIKAFELA-----KSR-SLDTNIRPKLWSSLEKAKETILSILKKYDIEVLITDPDD 198 (313)
T ss_dssp HHHTSSEEEEEHHHHHHCHHHHHHHHHHHHHC-----SSE-EEECCCCGGGSSCHHHHHHHHHHHHHHSCEEEEEECHHH
T ss_pred HhcCCCEEEEcCchhhcChHHHHHHHHHHHHH-----HHh-CcCCcCChhhcCCHHHHHHHHHHHHHhcCeeEEECcHHH
Confidence 356799998853111 1233345555565543 333 89996532111100 1111 123457 99999999
Q ss_pred HhhhcCCChH-HHHH-HHHhCCCEEEEEe-CCe-eEEEcCCeEEEEcCCC-CCCCCCChhHHHHhhh
Q psy9483 123 YENLLSGSEV-NAAY-IKQGHPNLTVIVK-GHE-DVIKNNQISLTCKEGN-SWRRCGGQGDLVAGHR 184 (186)
Q Consensus 123 ~~rL~~~~~~-~~a~-~a~~~~~~~vvlK-G~~-~~I~~~~~~~~~~~g~-~~la~~GsGDvLaGii 184 (186)
+..|++.++. +.++ +.+.. -..|++| |+. .+++++++.+....-. ...-+.|+||.++|.+
T Consensus 199 ~~~l~g~~~~~~~~~~l~~~g-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~ 264 (313)
T 2v78_A 199 TKILLDVTDPDEAYRKYKELG-VKVLLYKLGSKGAIAYKDNVKAFKDAYKVPVEDPTGAGDAMAGTF 264 (313)
T ss_dssp HHHHHSCCCHHHHHHHHHHTT-EEEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHH
T ss_pred HHHHhCCCCHHHHHHHHHhCC-CCEEEEEECCCCcEEeeCCcEEEeCCCcCCccCCCCchHHHHHHH
Confidence 9999997433 4566 66643 2456665 433 3445556555444322 2346999999998754
No 64
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A*
Probab=96.93 E-value=0.0014 Score=54.84 Aligned_cols=121 Identities=15% Similarity=0.190 Sum_probs=69.2
Q ss_pred ccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCcccc-cccCCCeEecCCHHHHhhhcCCCh
Q psy9483 53 NRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHPGLI-QDYRGPVYLTPNKREYENLLSGSE 131 (186)
Q Consensus 53 ~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~~l~-~~~~~~~iiTPh~~E~~rL~~~~~ 131 (186)
+.+|.++++.- .. +.+.++++.+++. +.++++|+..-..+- ..+.+ ...+...+++||..|+..|++...
T Consensus 134 ~~~~~v~~~~~---~~---~~~~~~~~~a~~~--g~~v~~D~~~~~~~~-~~~~~~~~l~~~dil~~N~~Ea~~l~g~~~ 204 (326)
T 3b1n_A 134 KDIKLAIVGPD---GF---QGMVQHTEELAQA--GVPFIFDPGQGLPLF-DGATLRRSIELATYIAVNDYEAKLVCDKTG 204 (326)
T ss_dssp CSCSEEEECSC---CH---HHHHHHHHHHHHH--TCCEEECCGGGGGGC-CHHHHHHHHHHCSEEEEEHHHHHHHHHHHC
T ss_pred cCCCEEEECCc---cH---HHHHHHHHHHHHC--CCEEEEeCchhhhhc-cHHHHHHHHHhCCEEecCHHHHHHHhCCCC
Confidence 57899998652 22 2344555555556 789999996422111 11111 112345899999999999987410
Q ss_pred HHHHHHHHhCCCEEEEEe-CCe-eEEEcCCeEEEEcCCCC--CCCCCChhHHHHhhh
Q psy9483 132 VNAAYIKQGHPNLTVIVK-GHE-DVIKNNQISLTCKEGNS--WRRCGGQGDLVAGHR 184 (186)
Q Consensus 132 ~~~a~~a~~~~~~~vvlK-G~~-~~I~~~~~~~~~~~g~~--~la~~GsGDvLaGii 184 (186)
.+...+.+.. ..|++| |+. .+++++++.+....-.. ---+.|+||.++|.+
T Consensus 205 ~~~~~l~~~~--~~vvvT~G~~Ga~~~~~~~~~~~~~~~v~~vvDttGAGDaF~ag~ 259 (326)
T 3b1n_A 205 WSEDEIASRV--QALIITRGEHGATIRHRDGTEQIPAVRAERVIDPTGCGDAFRGGL 259 (326)
T ss_dssp CCHHHHHTTS--SEEEEECGGGCEEEEETTEEEEECCCCCSCCCCCTTHHHHHHHHH
T ss_pred CCHHHHHhcC--CEEEEecCCCceEEEECCcEEEeCCCCCCCCCCCCCchHHHHHHH
Confidence 0011244444 345554 443 34555666555543222 236899999998754
No 65
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae}
Probab=96.93 E-value=0.0029 Score=53.79 Aligned_cols=131 Identities=11% Similarity=0.067 Sum_probs=74.3
Q ss_pred HHhcccCcEEEEc-cCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCcc-cccccCCCeEecCCHHHHhhh
Q psy9483 49 MYWMNRMHSVLIG-PGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHPG-LIQDYRGPVYLTPNKREYENL 126 (186)
Q Consensus 49 ~~~~~~~~aivIG-pGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~~-l~~~~~~~~iiTPh~~E~~rL 126 (186)
.+.++.+|.+++. .-+.. ..+.+.++++.+++. ++++++|+.+-.......+ +....+.+.+++||..|++.|
T Consensus 171 ~~~~~~~~~v~i~G~~~~~---~~~~~~~~~~~a~~~--g~~v~~d~~~~~~~~~~~~~l~~~l~~~dil~~N~~Ea~~l 245 (365)
T 3loo_A 171 RAYLQGAQFFYVSGFFFTV---SFESALSVAKEAAAT--GRMFMMNLSAPFVPQFYKNNLEEIFPYVDVLFGNETEAIAL 245 (365)
T ss_dssp HHHHHHCSEEEEEGGGHHH---HHHHHHHHHHHHHHT--TCEEEEECCSTHHHHHCHHHHHHHGGGCSEEEEEHHHHHHH
T ss_pred HHHHhhCCEEEEeeeeccC---CHHHHHHHHHHHHHc--CCEEEEECCchhhhHHHHHHHHHHHHhCCEEecCHHHHHHH
Confidence 3456789999995 21111 124455667766666 7899999854322111111 112234579999999999999
Q ss_pred cCC-----ChH-HHHH-HHHh------CCCEEEEEeCCe-eEEE--cCCeEEEEcCCC----CCCCCCChhHHHHhhh
Q psy9483 127 LSG-----SEV-NAAY-IKQG------HPNLTVIVKGHE-DVIK--NNQISLTCKEGN----SWRRCGGQGDLVAGHR 184 (186)
Q Consensus 127 ~~~-----~~~-~~a~-~a~~------~~~~~vvlKG~~-~~I~--~~~~~~~~~~g~----~~la~~GsGDvLaGii 184 (186)
++. ++. +.++ +.+. ....+||=.|+. .+++ ++++.+....-. ..--+.|.||.+.|-+
T Consensus 246 ~g~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~agf 323 (365)
T 3loo_A 246 AKEFNYGTEDLREIGKRIAALPKENGKRKRIVIITQGSDPVLLIEAGTDNVREFPVQKLAPEQMVDTNGAGDAFVGGF 323 (365)
T ss_dssp HHHTTCCCCCHHHHHHHHHTSCCSSTTSCCEEEEEETTEEEEEEETTCSCCEEECCCCCC------CTTHHHHHHHHH
T ss_pred hcccCCCCCCHHHHHHHHHhhhhhccCCCCEEEEEeCCCCEEEEEecCCeEEEEeccccCCCCccCCCChHHHHHHHH
Confidence 874 233 3566 6653 212444444554 3455 555544433222 2246899999998754
No 66
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}
Probab=96.87 E-value=0.002 Score=54.13 Aligned_cols=133 Identities=11% Similarity=0.072 Sum_probs=73.5
Q ss_pred HHhcccCcEEEEcc-CCCCCHHHHHHHHHHHHHHHhcCCCCCEEEeccccccccc-C--cccc-cccCCCeEecCCHHHH
Q psy9483 49 MYWMNRMHSVLIGP-GLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAE-H--PGLI-QDYRGPVYLTPNKREY 123 (186)
Q Consensus 49 ~~~~~~~~aivIGp-Glg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~-~--~~l~-~~~~~~~iiTPh~~E~ 123 (186)
.+.++.++.+.++- -+...+...+.+.++++.+++. ++++++|+.--..+-. . .+.+ +..+...+++||..|+
T Consensus 145 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~ak~~--g~~v~~D~n~r~~lw~~~~~~~~~~~~l~~~dil~~N~~Ea 222 (351)
T 4gm6_A 145 SELLKGIRVLHVSGITIALSTFWLEMVVKIIREAKRN--GIKISFDMNYRAKLWELEAAKRAYQQLLPLVDYCSAGQMDA 222 (351)
T ss_dssp HHHHTTEEEEEEEHHHHHHCHHHHHHHHHHHHHHHHT--TCEEEEECCCCTTTSCHHHHHHHHHHHGGGCSEEECCHHHH
T ss_pred HHHHhhcccceecccchhhchhHHHHHHHHHHHHHHc--CCCcccCCCcCchhhhhhhHHHHHHHHHHhCCccccCHHHH
Confidence 34566788887752 1223455567777888888877 8999999953211100 0 1111 1123468999999999
Q ss_pred hhhcCC-C-hHHHHH-HHHhCCCEEEEEeCCee-----------EEEcCCeEEEEcCCC--CCCCCCChhHHHHhh
Q psy9483 124 ENLLSG-S-EVNAAY-IKQGHPNLTVIVKGHED-----------VIKNNQISLTCKEGN--SWRRCGGQGDLVAGH 183 (186)
Q Consensus 124 ~rL~~~-~-~~~~a~-~a~~~~~~~vvlKG~~~-----------~I~~~~~~~~~~~g~--~~la~~GsGDvLaGi 183 (186)
..|++. + ..+..+ ..+++.+..+++.+... .++..+..+...... +---+.|.||.+.|-
T Consensus 223 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~VvDttGAGDaF~ag 298 (351)
T 4gm6_A 223 VAFFEISSETTDYYQAMHDKYPNIELFYATKRTVISASHHLLQGHLWTQGECWESEEYAIYPIVDRVGGGDAYTAA 298 (351)
T ss_dssp HHTSCCCTTCSCHHHHHHHHCTTCCEEEEEEEEEEETTEEEEEEEEEETTEEEEEEEEEECSCSCCTTHHHHHHHH
T ss_pred HHHhCCCCchhHHHHHHHhhhhhhhhhhccccceeeeccCCceEEEEeCCceEEeCCCCCCCcCCCCChhHHHHHH
Confidence 999997 2 222334 44444222222211111 233334433332222 234689999997763
No 67
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A*
Probab=96.61 E-value=0.0029 Score=52.32 Aligned_cols=124 Identities=11% Similarity=0.089 Sum_probs=68.4
Q ss_pred hcccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEeccccccccc-Cc----cccc-ccCCCeEecCCHHHHh
Q psy9483 51 WMNRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAE-HP----GLIQ-DYRGPVYLTPNKREYE 124 (186)
Q Consensus 51 ~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~-~~----~l~~-~~~~~~iiTPh~~E~~ 124 (186)
.++.++.+.++.=+...+...+.+.++++.++ . +.++++|+..-..+-. +. +.++ ..+...+++||..|++
T Consensus 121 ~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~-~--~~~v~~Dp~~~~~~~~~~~~~~~~~~~~~l~~~di~~~N~~E~~ 197 (313)
T 3ewm_A 121 IVEEAKIVNFGSVILARNPSRETVMKVIKKIK-G--SSLIAFDVNLRLDLWRGQEEEMIKVLEESIKLADIVKASEEEVL 197 (313)
T ss_dssp HHHHCSEEEEESGGGGSTTHHHHHHHHHHHHB-T--TBEEEEECCCCGGGGTTCHHHHHHHHHHHHHHCSEEEEEHHHHH
T ss_pred HhCCCCEEEEcCcccCCcchHHHHHHHHHHhc-c--CCEEEEeCCCChHHcCCCHHHHHHHHHHHHhhCCEEecCHHHHH
Confidence 34568888776322222334455666776654 3 5789999954321111 11 1111 1234589999999999
Q ss_pred hhcCCChHHHHHHHHhCCCEEEEEe-CCe-eEEEcCCeEEEEcCC-CCCCCCCChhHHHHhhh
Q psy9483 125 NLLSGSEVNAAYIKQGHPNLTVIVK-GHE-DVIKNNQISLTCKEG-NSWRRCGGQGDLVAGHR 184 (186)
Q Consensus 125 rL~~~~~~~~a~~a~~~~~~~vvlK-G~~-~~I~~~~~~~~~~~g-~~~la~~GsGDvLaGii 184 (186)
.|.+... ...+..+||+| |+. .+++++++.+....- ...--+.|+||.++|.+
T Consensus 198 ~l~~~~~-------~~~~~~~vviT~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaf~a~~ 253 (313)
T 3ewm_A 198 YLENQGV-------EVKGSMLTAITLGPKGCRLIKNETVVDVPSYNVNPLDTTGAGDAFMAAL 253 (313)
T ss_dssp HHHTTTC-------CCCCSSEEEEECGGGEEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHH
T ss_pred HHhccCc-------cccCceEEEEEECCCCeEEEECCeeEEcCCCCcccCCCCCchHHHHHHH
Confidence 9987410 00011334554 443 345556655544432 22346999999998864
No 68
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A
Probab=96.42 E-value=0.074 Score=43.83 Aligned_cols=121 Identities=11% Similarity=0.071 Sum_probs=66.6
Q ss_pred cccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcC-C-----CCCEEEecccccccccCcccccccCCCeEecCCHHHHhh
Q psy9483 52 MNRMHSVLIGPGLGTEPLVQSNVISIIHKLKAAN-L-----NVPLVIDADGLKLVAEHPGLIQDYRGPVYLTPNKREYEN 125 (186)
Q Consensus 52 ~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~-~-----~~p~VlDadal~~l~~~~~l~~~~~~~~iiTPh~~E~~r 125 (186)
++.+|.++++.- ..+. ..++++.+++.. + ..++++|+.... ..+.+..+...+++||..|+..
T Consensus 144 l~~~~~v~~~~~---~~~~---~~~~~~~a~~~~~~~~~~~~~~v~~d~~~~~-----~~~~~~l~~~dil~~n~~ea~~ 212 (312)
T 2hlz_A 144 LTQFKWIHIEGR---NASE---QVKMLQRIDAHNTRQPPEQKIRVSVEVEKPR-----EELFQLFGYGDVVFVSKDVAKH 212 (312)
T ss_dssp GGGEEEEEEECS---SHHH---HHHHHHHHHHHHTTSCGGGCCEEEEEECSCC-----GGGGGGGGSSSEEEECHHHHHH
T ss_pred hccCCEEEEecc---CHHH---HHHHHHHHHHhcccccCCCCeEEEEEcccch-----HHHHHHHhcCCEEEEcHHHHHH
Confidence 467888988742 2222 223333332220 0 257889975421 1111223346899999999998
Q ss_pred hcCCCh-HHHHH-HHHhCCC-EEEEEe-CCe-eEEEc-CCeEEEEcCC--CCCCCCCChhHHHHhhh
Q psy9483 126 LLSGSE-VNAAY-IKQGHPN-LTVIVK-GHE-DVIKN-NQISLTCKEG--NSWRRCGGQGDLVAGHR 184 (186)
Q Consensus 126 L~~~~~-~~~a~-~a~~~~~-~~vvlK-G~~-~~I~~-~~~~~~~~~g--~~~la~~GsGDvLaGii 184 (186)
| +.++ .+.++ +.+.+.. ..|++| |+. .++++ ++..+....- ...--+.|+||.++|.+
T Consensus 213 l-g~~~~~~~~~~l~~~~~~g~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~vvdt~GAGDaf~a~~ 278 (312)
T 2hlz_A 213 L-GFQSAEEALRGLYGRVRKGAVLVCAWAEEGADALGPDGKLLHSDAFPPPRVVDTLGAGDTFNASV 278 (312)
T ss_dssp T-TCCSHHHHHHHHGGGSCTTCEEEEECGGGCEEEECTTCCEEEECCCCCSSCCCCTTHHHHHHHHH
T ss_pred c-CCCCHHHHHHHHHHhcCCCCEEEEEecccCeEEEccCCCEEECCCCCCCCcccCCCchHHHHHHH
Confidence 8 6533 34555 6665521 355555 443 34454 3444444431 23446999999998754
No 69
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A*
Probab=96.04 E-value=0.014 Score=49.73 Aligned_cols=130 Identities=12% Similarity=0.096 Sum_probs=73.5
Q ss_pred HHhcccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCcccc-cccCCCeEecCCHHHHhhhc
Q psy9483 49 MYWMNRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHPGLI-QDYRGPVYLTPNKREYENLL 127 (186)
Q Consensus 49 ~~~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~~l~-~~~~~~~iiTPh~~E~~rL~ 127 (186)
.+.++.++.+.+.. ... +...+.+.++++.+++. ++++++|...-.......+.+ +..+...|+.||..|+..|+
T Consensus 175 ~~~i~~a~~~~~~g-~~~-~~~~~~~~~~~~~a~~~--g~~v~ldls~~~~~~~~~~~l~~ll~~~Dil~~Ne~Ea~~l~ 250 (372)
T 3uq6_A 175 WSLVEKAQVYYIAG-FVI-NTCYEGMLKIAKHSLEN--EKLFCFNLSAPFLSQFNTKEVDEMISYSNIVFGNESEAEAYG 250 (372)
T ss_dssp HHHHHHCSEEEEEG-GGH-HHHHHHHHHHHHHHHHT--TCEEEEECCCHHHHHHCHHHHHHHHTTCSEEEEEHHHHHHHH
T ss_pred HHHhhcccEEEEec-ccc-cccHHHHHHHHHHHHHc--CCeEeeccccchhhhhhHHHHHHHhhcCCcccCCHHHHHHHh
Confidence 34566788888764 322 22345566677777777 899999987654433333222 22345689999999999998
Q ss_pred CC-----ChHH-HHH-HHHh-------CCCEEEEEeCCeeEE-EcCCe----EEEEcCCCC--CCCCCChhHHHHh
Q psy9483 128 SG-----SEVN-AAY-IKQG-------HPNLTVIVKGHEDVI-KNNQI----SLTCKEGNS--WRRCGGQGDLVAG 182 (186)
Q Consensus 128 ~~-----~~~~-~a~-~a~~-------~~~~~vvlKG~~~~I-~~~~~----~~~~~~g~~--~la~~GsGDvLaG 182 (186)
+. ++.+ .++ +++. ....+|+=.|..-.+ ++++. .|....-.+ ---|.|.||.++|
T Consensus 251 ~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~v~~~~~~~vVDTtGAGDaF~a 326 (372)
T 3uq6_A 251 EVHGLLEDTVHATARYIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFAA 326 (372)
T ss_dssp HHTTCCSSHHHHHHHHHHHSCCTTCCCCCCEEEEEETTEEEEEEESSCSSCEEECCCCCCGGGCCCCTTHHHHHHH
T ss_pred CCCCCchhHHHHHHHHHhhhhhhhhcCCceEEEEcCCCCceEEecCCCceeeeeeccCCCCCceeCCCchHHHHHH
Confidence 75 2333 455 5432 112344445655433 33322 111111111 1248899999875
No 70
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728}
Probab=94.95 E-value=0.026 Score=46.72 Aligned_cols=109 Identities=13% Similarity=0.095 Sum_probs=61.6
Q ss_pred ccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCcccc-cccCCCeEecCCHHHHhhhcCC-C
Q psy9483 53 NRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHPGLI-QDYRGPVYLTPNKREYENLLSG-S 130 (186)
Q Consensus 53 ~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~~l~-~~~~~~~iiTPh~~E~~rL~~~-~ 130 (186)
+.+|.++++... .+.++++.+ . + ++++|+..- +.....+.+ ...+...+++||..|+..|++. +
T Consensus 139 ~~~~~v~~~~~~--------~~~~~~~~a--~--~-~v~~D~~~~-~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~ 204 (306)
T 3bf5_A 139 DEYEYVHFSTGP--------NYLDMAKSI--R--S-KIIFDPSQE-IHKYSKDELKKFHEISYMSIFNDHEYRVFREMTG 204 (306)
T ss_dssp SCEEEEEECSSS--------SHHHHHHHC--C--S-EEEECCGGG-GGGSCHHHHHHHHHHCSEEEEEHHHHHHHHHHHC
T ss_pred CCCCEEEECChH--------HHHHHHHHh--C--C-cEEEcCchh-hhhccHHHHHHHHhcCCEEEcCHHHHHHHhCCCC
Confidence 568999998654 233444432 2 4 899999842 111111111 1223468999999999999874 1
Q ss_pred hHHHHHHHHhCCCEEEEEe-CCe-eEEEcCCeEEEEcC-CCCCCCCCChhHHHHhhh
Q psy9483 131 EVNAAYIKQGHPNLTVIVK-GHE-DVIKNNQISLTCKE-GNSWRRCGGQGDLVAGHR 184 (186)
Q Consensus 131 ~~~~a~~a~~~~~~~vvlK-G~~-~~I~~~~~~~~~~~-g~~~la~~GsGDvLaGii 184 (186)
. + -+ ++ . |++| |+. .+++++++.+.... ... .-+.|+||.++|.+
T Consensus 205 ~-~---~~-~l-~--vvvT~G~~Ga~~~~~~~~~~~~~~~v~-vDttGAGDaF~ag~ 252 (306)
T 3bf5_A 205 L-S---SP-KV-T--TIVTNGERGSSLFMDGKKYDFPAIPSS-GDTVGAGDSFRAGL 252 (306)
T ss_dssp C-S---SC-SS-C--EEEEEGGGEEEEEETTEEEEEECCCCC-SCCTTHHHHHHHHH
T ss_pred c-C---cc-cE-E--EEEeecccCeEEEeCCcEEEecCCcCC-CCCCCccHHHHHHH
Confidence 0 0 00 22 1 4443 443 34455555444332 233 57999999998754
No 71
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=73.69 E-value=5.2 Score=34.36 Aligned_cols=83 Identities=17% Similarity=0.131 Sum_probs=52.0
Q ss_pred chhhcccceeEEEecCCch----hhhhhcCCceEEecccCCCcchHHHHHHhccc-CcEEEEccCCCCCHHHHHHHHHHH
Q psy9483 4 ILQCATVTLSIYVCSEGAV----PILKNYSPELIVLPHYLDRNDSVDHIMYWMNR-MHSVLIGPGLGTEPLVQSNVISII 78 (186)
Q Consensus 4 ~~~r~GaGlv~v~~~~~~~----~~~~~~~Pe~~v~~~~~~~~~~~~~~~~~~~~-~~aivIGpGlg~~~~~~~~~~~~l 78 (186)
...++||.+|++.+|.... ..++...|=-++-++ +- ....+..-++. +|.+=||||---++ +-+++++
T Consensus 54 ~l~~aG~diVRvavp~~~~a~al~~I~~~~~vPlvaDi-Hf---~~~lal~a~e~G~dklRINPGNig~~---~~~~~vv 126 (366)
T 3noy_A 54 RLYEAGCEIVRVAVPHKEDVEALEEIVKKSPMPVIADI-HF---APSYAFLSMEKGVHGIRINPGNIGKE---EIVREIV 126 (366)
T ss_dssp HHHHTTCCEEEEECCSHHHHHHHHHHHHHCSSCEEEEC-CS---CHHHHHHHHHTTCSEEEECHHHHSCH---HHHHHHH
T ss_pred HHHHcCCCEEEeCCCChHHHHHHHHHHhcCCCCEEEeC-CC---CHHHHHHHHHhCCCeEEECCcccCch---hHHHHHH
Confidence 4568999999999998432 344455553344443 11 12333334444 99999999954333 3456677
Q ss_pred HHHHhcCCCCCEEEecc
Q psy9483 79 HKLKAANLNVPLVIDAD 95 (186)
Q Consensus 79 ~~~~~~~~~~p~VlDad 95 (186)
+.++++ ++|+.+-.-
T Consensus 127 ~~ak~~--~~piRIGvN 141 (366)
T 3noy_A 127 EEAKRR--GVAVRIGVN 141 (366)
T ss_dssp HHHHHH--TCEEEEEEE
T ss_pred HHHHHc--CCCEEEecC
Confidence 777777 999988543
No 72
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=59.12 E-value=11 Score=30.08 Aligned_cols=89 Identities=10% Similarity=0.121 Sum_probs=45.2
Q ss_pred cchhhcccceeEEEecCCc--hhhhh---hc---------CCceEEecccCCCcchHHHHHHhcccCcEEEE---ccCCC
Q psy9483 3 GILQCATVTLSIYVCSEGA--VPILK---NY---------SPELIVLPHYLDRNDSVDHIMYWMNRMHSVLI---GPGLG 65 (186)
Q Consensus 3 ~~~~r~GaGlv~v~~~~~~--~~~~~---~~---------~Pe~~v~~~~~~~~~~~~~~~~~~~~~~aivI---GpGlg 65 (186)
+.|..+||..+++-..... ...++ .+ --.+.+ .+... ...+.+.+.++.+|-+.+ +||.+
T Consensus 86 ~~~~~aGAd~itvH~ea~~~~~~~i~~i~~~~~~~~~~~~g~~~gv-~l~p~--Tp~~~l~~~l~~~D~vlvMsv~pgfg 162 (237)
T 3cu2_A 86 KAVVANGANLVTLQLEQYHDFALTIEWLAKQKTTYANQVYPVLIGA-CLCPE--TPISELEPYLDQIDVIQLLTLDPRNG 162 (237)
T ss_dssp HHHHHTTCSEEEEETTCTTSHHHHHHHHTTCEEEETTEEEECEEEE-EECTT--SCGGGGTTTTTTCSEEEEESEETTTT
T ss_pred HHHHHcCCCEEEEecCCcccHHHHHHHHHhcccccccccCCceEEE-EEeCC--ChHHHHHHHhhcCceeeeeeeccCcC
Confidence 4688999999887655442 22232 22 112222 22112 124455566678998877 99988
Q ss_pred CCHHH---HHHHHHHHHHHHhcCCCCCEEEec
Q psy9483 66 TEPLV---QSNVISIIHKLKAANLNVPLVIDA 94 (186)
Q Consensus 66 ~~~~~---~~~~~~~l~~~~~~~~~~p~VlDa 94 (186)
..... .+.++++-+...+.+.+.|+.+|.
T Consensus 163 gq~f~~~~l~ki~~lr~~~~~~~~~~~I~vdG 194 (237)
T 3cu2_A 163 TKYPSELILDRVIQVEKRLGNRRVEKLINIDG 194 (237)
T ss_dssp EECCHHHHHHHHHHHHHHHGGGGGGCEEEEES
T ss_pred CeecChhHHHHHHHHHHHHHhcCCCceEEEEC
Confidence 54322 233333222221110136777776
No 73
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=55.80 E-value=27 Score=30.39 Aligned_cols=90 Identities=12% Similarity=0.039 Sum_probs=52.1
Q ss_pred chhhcccceeEEEecCCch-h---hhhhc-----CCceEEecccCCCcc-hHHHHHHhcccCcEEEEccCCCCC-HHHHH
Q psy9483 4 ILQCATVTLSIYVCSEGAV-P---ILKNY-----SPELIVLPHYLDRND-SVDHIMYWMNRMHSVLIGPGLGTE-PLVQS 72 (186)
Q Consensus 4 ~~~r~GaGlv~v~~~~~~~-~---~~~~~-----~Pe~~v~~~~~~~~~-~~~~~~~~~~~~~aivIGpGlg~~-~~~~~ 72 (186)
+..++||.+|++.+|..-. . .++.. .|=-++-++ +-+.. .+..+....+..|.+=||||---+ ....+
T Consensus 46 ~L~~aG~eiVRvaVp~~~~A~al~~I~~~l~~~~~~vPLVADi-HF~~~~al~a~~~~a~~~dkiRINPGNig~~~k~~e 124 (406)
T 4g9p_A 46 ELHRAGSEIVRLTVNDEEAAKAVPEIKRRLLAEGVEVPLVGDF-HFNGHLLLRKYPKMAEALDKFRINPGTLGRGRHKDE 124 (406)
T ss_dssp HHHHHTCSEEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEEC-CSSHHHHHHHCHHHHHHCSEEEECTTSSCSTHHHHH
T ss_pred HHHHcCCCEEEEecCCHHHHHhHHHHHHHHHhcCCCCceEeee-cccHHHHHHHHHHHHhHHhhcccCccccCccccHHH
Confidence 3568999999999998642 2 22211 222244454 21111 112112233457999999996543 23345
Q ss_pred HHHHHHHHHHhcCCCCCEEEeccc
Q psy9483 73 NVISIIHKLKAANLNVPLVIDADG 96 (186)
Q Consensus 73 ~~~~~l~~~~~~~~~~p~VlDada 96 (186)
-+.++++.++++ ++|+=+.-.+
T Consensus 125 ~~~~vv~~ak~~--~~pIRIGVN~ 146 (406)
T 4g9p_A 125 HFAEMIRIAMDL--GKPVRIGANW 146 (406)
T ss_dssp HHHHHHHHHHHH--TCCEEEEEEG
T ss_pred HHHHHHHHHHHc--cCCceecccc
Confidence 577777777777 8888665433
No 74
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=52.85 E-value=16 Score=30.80 Aligned_cols=9 Identities=22% Similarity=0.397 Sum_probs=7.6
Q ss_pred CeEecCCHH
Q psy9483 113 PVYLTPNKR 121 (186)
Q Consensus 113 ~~iiTPh~~ 121 (186)
.+|+|||.+
T Consensus 300 nvilTPHia 308 (340)
T 4dgs_A 300 NTVLMPHQG 308 (340)
T ss_dssp SEEECSSCS
T ss_pred CEEEcCcCC
Confidence 489999976
No 75
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=49.44 E-value=74 Score=28.08 Aligned_cols=85 Identities=18% Similarity=0.229 Sum_probs=48.2
Q ss_pred chhhcccceeEEEecCC-------chhhhhhcCCce--EEecccCCCcchHHHHHHhcccCcEEEEccCCCCC-------
Q psy9483 4 ILQCATVTLSIYVCSEG-------AVPILKNYSPEL--IVLPHYLDRNDSVDHIMYWMNRMHSVLIGPGLGTE------- 67 (186)
Q Consensus 4 ~~~r~GaGlv~v~~~~~-------~~~~~~~~~Pe~--~v~~~~~~~~~~~~~~~~~~~~~~aivIGpGlg~~------- 67 (186)
++..+|+..+.+-+... ....++...|+. ++..+ .+.+....+.+ ..+|++++|.|-|..
T Consensus 263 aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~v--~t~e~a~~~~~--aGad~i~vg~g~gsi~~~~~~~ 338 (511)
T 3usb_A 263 ALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNV--ATAEATKALIE--AGANVVKVGIGPGSICTTRVVA 338 (511)
T ss_dssp HHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEEE--CSHHHHHHHHH--HTCSEEEECSSCSTTCCHHHHH
T ss_pred HHHhhccceEEecccccchhhhhhHHHHHHHhCCCceEEeeee--ccHHHHHHHHH--hCCCEEEECCCCcccccccccc
Confidence 46778999988876654 334555666763 33333 11122222222 259999997755441
Q ss_pred ---HHHHHHHHHHHHHHHhcCCCCCEEEec
Q psy9483 68 ---PLVQSNVISIIHKLKAANLNVPLVIDA 94 (186)
Q Consensus 68 ---~~~~~~~~~~l~~~~~~~~~~p~VlDa 94 (186)
......+.++.+.+++. ++|+|.|.
T Consensus 339 g~g~p~~~~l~~v~~~~~~~--~iPVIa~G 366 (511)
T 3usb_A 339 GVGVPQLTAVYDCATEARKH--GIPVIADG 366 (511)
T ss_dssp CCCCCHHHHHHHHHHHHHTT--TCCEEEES
T ss_pred CCCCCcHHHHHHHHHHHHhC--CCcEEEeC
Confidence 12234455554444445 79999987
No 76
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=47.54 E-value=1.1e+02 Score=25.05 Aligned_cols=81 Identities=12% Similarity=0.118 Sum_probs=46.9
Q ss_pred chhhcccceeEEEecCC-----------------------chhhhhhcCCceEEecccCC--CcchHHHHHHh-------
Q psy9483 4 ILQCATVTLSIYVCSEG-----------------------AVPILKNYSPELIVLPHYLD--RNDSVDHIMYW------- 51 (186)
Q Consensus 4 ~~~r~GaGlv~v~~~~~-----------------------~~~~~~~~~Pe~~v~~~~~~--~~~~~~~~~~~------- 51 (186)
...++|.|-++++=.+. ....++...|++-+..+... +.+.++++.+.
T Consensus 54 ~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~~l~~~~~~~~~~~~~~~~~l~ 133 (292)
T 3h8v_A 54 MLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNYNITTVENFQHFMDRISNGGLE 133 (292)
T ss_dssp HHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECCCTTSHHHHHHHHHHHHHBSSS
T ss_pred HHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEecccCCcHHHHHHHhhhhcccccc
Confidence 35688999998875544 23455677888766665211 11223332211
Q ss_pred -cccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEE
Q psy9483 52 -MNRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVI 92 (186)
Q Consensus 52 -~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~Vl 92 (186)
.+.+|.|+-+. ++.+++..+.+.... . ++|+|.
T Consensus 134 ~~~~~DlVid~~---Dn~~~R~~in~~c~~---~--~~Pli~ 167 (292)
T 3h8v_A 134 EGKPVDLVLSCV---DNFEARMTINTACNE---L--GQTWME 167 (292)
T ss_dssp TTBCCSEEEECC---SSHHHHHHHHHHHHH---H--TCCEEE
T ss_pred cCCCCCEEEECC---cchhhhhHHHHHHHH---h--CCCEEE
Confidence 15788887554 456666666665543 4 789864
No 77
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=47.03 E-value=1e+02 Score=24.13 Aligned_cols=79 Identities=18% Similarity=0.114 Sum_probs=45.8
Q ss_pred chhhcccceeEEEecCCc------------------------hhhhhhcCCceEEecccCCCcchHHHHHHhcccCcEEE
Q psy9483 4 ILQCATVTLSIYVCSEGA------------------------VPILKNYSPELIVLPHYLDRNDSVDHIMYWMNRMHSVL 59 (186)
Q Consensus 4 ~~~r~GaGlv~v~~~~~~------------------------~~~~~~~~Pe~~v~~~~~~~~~~~~~~~~~~~~~~aiv 59 (186)
...++|+|-++++-.+.+ ...+....|+.-+..+...-. .+.+.+.++.+|.|+
T Consensus 49 ~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~~--~~~~~~~~~~~DvVi 126 (249)
T 1jw9_B 49 YLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALLD--DAELAALIAEHDLVL 126 (249)
T ss_dssp HHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCCC--HHHHHHHHHTSSEEE
T ss_pred HHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccCC--HhHHHHHHhCCCEEE
Confidence 456889999998866651 123445567764444311111 123445567899988
Q ss_pred EccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEE
Q psy9483 60 IGPGLGTEPLVQSNVISIIHKLKAANLNVPLVI 92 (186)
Q Consensus 60 IGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~Vl 92 (186)
...+ +.++...+.+.... . ++|+|.
T Consensus 127 ~~~d---~~~~~~~l~~~~~~---~--~~p~i~ 151 (249)
T 1jw9_B 127 DCTD---NVAVRNQLNAGCFA---A--KVPLVS 151 (249)
T ss_dssp ECCS---SHHHHHHHHHHHHH---H--TCCEEE
T ss_pred EeCC---CHHHHHHHHHHHHH---c--CCCEEE
Confidence 7753 45566655555433 3 788753
No 78
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=44.16 E-value=37 Score=30.84 Aligned_cols=83 Identities=12% Similarity=0.131 Sum_probs=51.1
Q ss_pred hhhcccceeEEEecCCchhh------hhhcC-Cce-EEecccCCCcchHHHHHHhcccCcEEEEccC-----CCCCHHHH
Q psy9483 5 LQCATVTLSIYVCSEGAVPI------LKNYS-PEL-IVLPHYLDRNDSVDHIMYWMNRMHSVLIGPG-----LGTEPLVQ 71 (186)
Q Consensus 5 ~~r~GaGlv~v~~~~~~~~~------~~~~~-Pe~-~v~~~~~~~~~~~~~~~~~~~~~~aivIGpG-----lg~~~~~~ 71 (186)
++..|++.+-+=..++..+. +.... .++ ++.-+ ++.+.++.+.+.++.+|.+.||+| ++. ++..
T Consensus 182 ~l~~g~d~v~~sfV~~a~dv~~~~~~l~~~~~~~~~iiakI--E~~eav~nldeIl~~~DgImVargDLgvei~~-~~v~ 258 (587)
T 2e28_A 182 GIRQGIDFIAASFVRRASDVLEIRELLEAHDALHIQIIAKI--ENEEGVANIDEILEAADGLMVARGDLGVEIPA-EEVP 258 (587)
T ss_dssp HHHHTCSEEEESSCCSHHHHHHHHHHHHHTTCTTSEEEEEE--CSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCG-GGHH
T ss_pred HHHcCCCEEEECCCCCHHHHHHHHHHHHHcCCCCceEEEEE--CCHHHHHhHHHHHHhCCEEEEcCchhhhhcCH-HHHH
Confidence 45677777776555554432 22222 233 22222 334445555666666899999997 332 5566
Q ss_pred HHHHHHHHHHHhcCCCCCEEE
Q psy9483 72 SNVISIIHKLKAANLNVPLVI 92 (186)
Q Consensus 72 ~~~~~~l~~~~~~~~~~p~Vl 92 (186)
...+++++.+++. ++|+++
T Consensus 259 ~~qk~ii~~~~~~--gkpvi~ 277 (587)
T 2e28_A 259 LIQKLLIKKSNML--GKPVIT 277 (587)
T ss_dssp HHHHHHHHHHHHH--TCCEEE
T ss_pred HHHHHHHHHHHHc--CCCeEE
Confidence 6667788888888 899887
No 79
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=43.68 E-value=34 Score=27.84 Aligned_cols=49 Identities=14% Similarity=0.259 Sum_probs=34.5
Q ss_pred hHHHHHHhcccCcEEEEc-cCCCCC------HHHHHHHHHHHHHHHhcCCCCCEEEec
Q psy9483 44 SVDHIMYWMNRMHSVLIG-PGLGTE------PLVQSNVISIIHKLKAANLNVPLVIDA 94 (186)
Q Consensus 44 ~~~~~~~~~~~~~aivIG-pGlg~~------~~~~~~~~~~l~~~~~~~~~~p~VlDa 94 (186)
..+++.++++...++.|| +||.-. +...+.+...++.+++. ++|++|=.
T Consensus 79 ~~~~l~~l~~~~~vvaIGEiGLD~~~~~~~~~~Q~~~F~~ql~lA~e~--~lPv~iH~ 134 (287)
T 3rcm_A 79 SERQLRLLLSEPRVRAVGECGLDFNRDFSPRPLQEKALEAQLTLAAQL--RLPVFLHE 134 (287)
T ss_dssp HHHHHHHHHTSTTEEEEEEEEEETTTCSSCHHHHHHHHHHHHHHHHHH--TCCEEEEE
T ss_pred HHHHHHHHhcCCCeEEEEEeeeCCCcccCcHHHHHHHHHHHHHHHHHh--CCCEEEEc
Confidence 466777777778899998 565421 22456777777777778 89999844
No 80
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=42.44 E-value=78 Score=23.99 Aligned_cols=81 Identities=14% Similarity=0.099 Sum_probs=42.3
Q ss_pred chhhcccceeEEEecCCchhhhhhcCCceEE-ecccCCCcchHHHHHHh-cccCcEEEEccCCCCCH------HHHHHHH
Q psy9483 4 ILQCATVTLSIYVCSEGAVPILKNYSPELIV-LPHYLDRNDSVDHIMYW-MNRMHSVLIGPGLGTEP------LVQSNVI 75 (186)
Q Consensus 4 ~~~r~GaGlv~v~~~~~~~~~~~~~~Pe~~v-~~~~~~~~~~~~~~~~~-~~~~~aivIGpGlg~~~------~~~~~~~ 75 (186)
.|.+.|++.|++-........++...+..++ ..+ .+ .+++.+. ...+|.+++|+..++.. ...+.++
T Consensus 83 ~a~~~gad~v~l~~~~~~~~~~~~~~~~~~ig~sv--~t---~~~~~~a~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~ 157 (221)
T 1yad_A 83 IALFSTIHRVQLPSGSFSPKQIRARFPHLHIGRSV--HS---LEEAVQAEKEDADYVLFGHVFETDCKKGLEGRGVSLLS 157 (221)
T ss_dssp HHHTTTCCEEEECTTSCCHHHHHHHCTTCEEEEEE--CS---HHHHHHHHHTTCSEEEEECCC----------CHHHHHH
T ss_pred HHHHcCCCEEEeCCCccCHHHHHHHCCCCEEEEEc--CC---HHHHHHHHhCCCCEEEECCccccCCCCCCCCCCHHHHH
Confidence 5788999999885443444455554454322 222 11 2333222 24599999998544321 1223344
Q ss_pred HHHHHHHhcCCCCCEEEec
Q psy9483 76 SIIHKLKAANLNVPLVIDA 94 (186)
Q Consensus 76 ~~l~~~~~~~~~~p~VlDa 94 (186)
++.+. . +.|++.+.
T Consensus 158 ~~~~~---~--~~pvia~G 171 (221)
T 1yad_A 158 DIKQR---I--SIPVIAIG 171 (221)
T ss_dssp HHHHH---C--CSCEEEES
T ss_pred HHHHh---C--CCCEEEEC
Confidence 33222 3 68998875
No 81
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=41.75 E-value=91 Score=27.34 Aligned_cols=87 Identities=15% Similarity=0.200 Sum_probs=46.6
Q ss_pred chhhcccceeEEEecCC-------chhhhhhcCCceEEecccCCCcchHHHHHHhcccCcEEEEccCCCCCH--------
Q psy9483 4 ILQCATVTLSIYVCSEG-------AVPILKNYSPELIVLPHYLDRNDSVDHIMYWMNRMHSVLIGPGLGTEP-------- 68 (186)
Q Consensus 4 ~~~r~GaGlv~v~~~~~-------~~~~~~~~~Pe~~v~~~~~~~~~~~~~~~~~~~~~~aivIGpGlg~~~-------- 68 (186)
++..+|+..+.+-+... ....++...|+..+..-...+.+....+.+ ..+|++++|.|-|..-
T Consensus 238 ~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~g~v~t~e~a~~l~~--aGaD~I~Vg~g~Gs~~~tr~~~g~ 315 (496)
T 4fxs_A 238 ALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIE--AGVSAVKVGIGPGSICTTRIVTGV 315 (496)
T ss_dssp HHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEEEEECSHHHHHHHHH--HTCSEEEECSSCCTTBCHHHHHCC
T ss_pred HHHhccCceEEeccccccchHHHHHHHHHHHHCCCceEEEcccCcHHHHHHHHH--hCCCEEEECCCCCcCcccccccCC
Confidence 45677999888765543 233455666764321100111122222322 2599999964433321
Q ss_pred --HHHHHHHHHHHHHHhcCCCCCEEEec
Q psy9483 69 --LVQSNVISIIHKLKAANLNVPLVIDA 94 (186)
Q Consensus 69 --~~~~~~~~~l~~~~~~~~~~p~VlDa 94 (186)
.....+.++.+.+++. ++|+|-|.
T Consensus 316 g~p~~~~i~~v~~~~~~~--~iPVIa~G 341 (496)
T 4fxs_A 316 GVPQITAIADAAGVANEY--GIPVIADG 341 (496)
T ss_dssp CCCHHHHHHHHHHHHGGG--TCCEEEES
T ss_pred CccHHHHHHHHHHHhccC--CCeEEEeC
Confidence 1234555665555555 79999886
No 82
>1uqr_A 3-dehydroquinate dehydratase; shikimate pathway, aromatic amino acid biosynthesis, lyase; 1.7A {Actinobacillus pleuropneumoniae} SCOP: c.23.13.1
Probab=41.68 E-value=34 Score=25.77 Aligned_cols=41 Identities=15% Similarity=0.327 Sum_probs=25.9
Q ss_pred hHHHHHHhcccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEE
Q psy9483 44 SVDHIMYWMNRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLV 91 (186)
Q Consensus 44 ~~~~~~~~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~V 91 (186)
.++.+.+...++|.++||||--+. +--.+++.+..+ +.|+|
T Consensus 57 LId~Ih~a~~~~dgiIINpgA~TH--tSvAlrDAl~~v-----~~P~V 97 (154)
T 1uqr_A 57 LINRIHQAFQNTDFIIINPGAFTH--TSVAIRDALLAV-----SIPFI 97 (154)
T ss_dssp HHHHHHHTTTTCCEEEEECTTHHH--HCHHHHHHHHHH-----TCCEE
T ss_pred HHHHHHHhhhcCcEEEECcchhcc--chHHHHHHHHhC-----CCCEE
Confidence 455566555679999999984322 223455565554 78876
No 83
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=41.61 E-value=13 Score=28.27 Aligned_cols=48 Identities=21% Similarity=0.237 Sum_probs=31.9
Q ss_pred HHHHHhcccCcEEEEccCCC--CCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccc
Q psy9483 46 DHIMYWMNRMHSVLIGPGLG--TEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVA 101 (186)
Q Consensus 46 ~~~~~~~~~~~aivIGpGlg--~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~ 101 (186)
+.+.+.++++|.|+.-=|+| .++-+.+.+.+++ ++++++|+.++..+.
T Consensus 54 ~~l~~a~~~~DlVittGG~g~~~~D~T~ea~a~~~--------~~~l~~~~e~~~~i~ 103 (172)
T 3kbq_A 54 WAFRVALEVSDLVVSSGGLGPTFDDMTVEGFAKCI--------GQDLRIDEDALAMIK 103 (172)
T ss_dssp HHHHHHHHHCSEEEEESCCSSSTTCCHHHHHHHHH--------TCCCEECHHHHHHHH
T ss_pred HHHHHHHhcCCEEEEcCCCcCCcccchHHHHHHHc--------CCCeeeCHHHHHHHH
Confidence 34555566799999855554 4455556555544 788999998887554
No 84
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=41.44 E-value=36 Score=30.36 Aligned_cols=84 Identities=14% Similarity=0.195 Sum_probs=48.9
Q ss_pred hhhcccceeEEEecCCchhh------hhhcCCceEEecccCCCcchHHHHHHhcccCcEEEEccC-----CCCCHHHHHH
Q psy9483 5 LQCATVTLSIYVCSEGAVPI------LKNYSPELIVLPHYLDRNDSVDHIMYWMNRMHSVLIGPG-----LGTEPLVQSN 73 (186)
Q Consensus 5 ~~r~GaGlv~v~~~~~~~~~------~~~~~Pe~~v~~~~~~~~~~~~~~~~~~~~~~aivIGpG-----lg~~~~~~~~ 73 (186)
++..|++.+-+=-.++.... +.....++.+... -++.+.++.+.+.+..+|++.||+| ++ .++....
T Consensus 202 ~l~~g~d~I~lpfV~saeDv~~~~~~l~~~~~~i~Iiak-IEt~eav~nldeI~~~~DgImvgrgDLgvelg-~~~v~~a 279 (500)
T 1a3w_A 202 GVKNGVHMVFASFIRTANDVLTIREVLGEQGKDVKIIVK-IENQQGVNNFDEILKVTDGVMVARGDLGIEIP-APEVLAV 279 (500)
T ss_dssp HHHHTCSEEEECSCCSHHHHHHHHHHHHHHHTTSEEEEE-ECSSHHHHSHHHHHHHSSEEEECHHHHHHHTT-GGGHHHH
T ss_pred HHHcCCCEEEECCCCCHHHHHHHHHHHHhcCCCcEEEEE-ECChHHHHhHHHHHHhCCEEEECchHhhhhcC-cHHHHHH
Confidence 45667776665544544332 2111123322222 2334445555555556899999997 55 3455566
Q ss_pred HHHHHHHHHhcCCCCCEEE
Q psy9483 74 VISIIHKLKAANLNVPLVI 92 (186)
Q Consensus 74 ~~~~l~~~~~~~~~~p~Vl 92 (186)
.++++..+++. ++|++.
T Consensus 280 qk~ii~aaraa--Gkpvi~ 296 (500)
T 1a3w_A 280 QKKLIAKSNLA--GKPVIC 296 (500)
T ss_dssp HHHHHHHHHHH--TCCEEE
T ss_pred HHHHHHHHHhc--CCCEEE
Confidence 67788888888 899885
No 85
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=40.70 E-value=62 Score=25.45 Aligned_cols=89 Identities=10% Similarity=0.223 Sum_probs=45.4
Q ss_pred cchhhcccceeEEEecC-C-----chhhhhhcCCceEEecccCCCcchHHHHHHhcccCcEEE---EccCCCCC---HHH
Q psy9483 3 GILQCATVTLSIYVCSE-G-----AVPILKNYSPELIVLPHYLDRNDSVDHIMYWMNRMHSVL---IGPGLGTE---PLV 70 (186)
Q Consensus 3 ~~~~r~GaGlv~v~~~~-~-----~~~~~~~~~Pe~~v~~~~~~~~~~~~~~~~~~~~~~aiv---IGpGlg~~---~~~ 70 (186)
+.|.++||..+++-... . ....++.+--...+. ++..+ ..+.+.++++..|-++ ++||.+.- ++.
T Consensus 74 ~~~~~aGAd~itvh~Ea~~~~~~~~i~~i~~~G~k~gv~-lnp~t--p~~~~~~~l~~~D~VlvmsV~pGfggQ~f~~~~ 150 (231)
T 3ctl_A 74 AQLARAGADFITLHPETINGQAFRLIDEIRRHDMKVGLI-LNPET--PVEAMKYYIHKADKITVMTVDPGFAGQPFIPEM 150 (231)
T ss_dssp HHHHHHTCSEEEECGGGCTTTHHHHHHHHHHTTCEEEEE-ECTTC--CGGGGTTTGGGCSEEEEESSCTTCSSCCCCTTH
T ss_pred HHHHHcCCCEEEECcccCCccHHHHHHHHHHcCCeEEEE-EECCC--cHHHHHHHHhcCCEEEEeeeccCcCCccccHHH
Confidence 35788999999976443 1 222333443343332 11221 2344555667789887 78887742 233
Q ss_pred HHHHHHHHHHHHhcCCCCCEEEec
Q psy9483 71 QSNVISIIHKLKAANLNVPLVIDA 94 (186)
Q Consensus 71 ~~~~~~~l~~~~~~~~~~p~VlDa 94 (186)
.+.++++-+...+.+.+.++.+|.
T Consensus 151 l~kI~~lr~~~~~~~~~~~I~VdG 174 (231)
T 3ctl_A 151 LDKLAELKAWREREGLEYEIEVDG 174 (231)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEEES
T ss_pred HHHHHHHHHHHhccCCCceEEEEC
Confidence 333333322221111145677775
No 86
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=40.67 E-value=31 Score=27.65 Aligned_cols=89 Identities=18% Similarity=0.303 Sum_probs=45.4
Q ss_pred cchhhcccceeEEEecCC-----chhhhhhcCCceEEecccCCCcchHHHHHHhcccCcEEEE---ccCCCCC---HHHH
Q psy9483 3 GILQCATVTLSIYVCSEG-----AVPILKNYSPELIVLPHYLDRNDSVDHIMYWMNRMHSVLI---GPGLGTE---PLVQ 71 (186)
Q Consensus 3 ~~~~r~GaGlv~v~~~~~-----~~~~~~~~~Pe~~v~~~~~~~~~~~~~~~~~~~~~~aivI---GpGlg~~---~~~~ 71 (186)
+.|..+||+++++-.... ....++.+--.+.+. +...+ ..+.+.+++...|-+++ +||++-- +++.
T Consensus 103 ~~~~~aGAd~itvH~Ea~~~~~~~i~~ir~~G~k~Gva-lnp~T--p~e~l~~~l~~vD~VlvMsV~PGfgGQ~fi~~~l 179 (246)
T 3inp_A 103 ESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLA-LNPAT--GIDCLKYVESNIDRVLIMSVNPGFGGQKFIPAML 179 (246)
T ss_dssp HHHHHHTCSEEEECGGGCSCHHHHHHHHHTTTSEEEEE-ECTTC--CSGGGTTTGGGCSEEEEECSCTTC--CCCCTTHH
T ss_pred HHHHHcCCCEEEEccccchhHHHHHHHHHHcCCeEEEE-ecCCC--CHHHHHHHHhcCCEEEEeeecCCCCCcccchHHH
Confidence 357889999999965422 223334433333332 21121 23455566667888865 7888642 3344
Q ss_pred HHHHHHHHHHHhcCCCCCEEEec
Q psy9483 72 SNVISIIHKLKAANLNVPLVIDA 94 (186)
Q Consensus 72 ~~~~~~l~~~~~~~~~~p~VlDa 94 (186)
+.++++-+...+.+.+.++.+|.
T Consensus 180 ~KI~~lr~~~~~~~~~~~I~VDG 202 (246)
T 3inp_A 180 DKAKEISKWISSTDRDILLEIDG 202 (246)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEES
T ss_pred HHHHHHHHHHHhcCCCeeEEEEC
Confidence 44444322222221146677886
No 87
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=40.63 E-value=28 Score=29.37 Aligned_cols=13 Identities=8% Similarity=0.299 Sum_probs=9.3
Q ss_pred cCcEEEEccCCCC
Q psy9483 54 RMHSVLIGPGLGT 66 (186)
Q Consensus 54 ~~~aivIGpGlg~ 66 (186)
+.++++|+.+-|.
T Consensus 247 k~gailIN~aRG~ 259 (351)
T 3jtm_A 247 KKGVLIVNNARGA 259 (351)
T ss_dssp CTTEEEEECSCGG
T ss_pred CCCCEEEECcCch
Confidence 4778888887553
No 88
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=40.18 E-value=1.3e+02 Score=25.42 Aligned_cols=87 Identities=15% Similarity=0.176 Sum_probs=45.1
Q ss_pred cchhhcccceeEEEecCC----ch---hhhhhcCCceEEecccCCCcchHHHHHHhc-ccCcEEEEccCCCCC-------
Q psy9483 3 GILQCATVTLSIYVCSEG----AV---PILKNYSPELIVLPHYLDRNDSVDHIMYWM-NRMHSVLIGPGLGTE------- 67 (186)
Q Consensus 3 ~~~~r~GaGlv~v~~~~~----~~---~~~~~~~Pe~~v~~~~~~~~~~~~~~~~~~-~~~~aivIGpGlg~~------- 67 (186)
++++.+|+..+.+-+... .. ..++...|+..+..-.-.+ .+++.... ..+|++++|.|=|..
T Consensus 114 ~~lieaGvd~I~idta~G~~~~~~~~I~~ik~~~p~v~Vi~G~v~t---~e~A~~a~~aGAD~I~vG~gpGs~~~tr~~~ 190 (366)
T 4fo4_A 114 KALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVAT---AEGARALIEAGVSAVKVGIGPGSICTTRIVT 190 (366)
T ss_dssp HHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCEEEEEEECS---HHHHHHHHHHTCSEEEECSSCSTTBCHHHHH
T ss_pred HHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCceEeeeeCC---HHHHHHHHHcCCCEEEEecCCCCCCCccccc
Confidence 357788999888744322 11 2355566775442210011 23333222 259999997332221
Q ss_pred ---HHHHHHHHHHHHHHHhcCCCCCEEEec
Q psy9483 68 ---PLVQSNVISIIHKLKAANLNVPLVIDA 94 (186)
Q Consensus 68 ---~~~~~~~~~~l~~~~~~~~~~p~VlDa 94 (186)
......+.++.+.++.. ++|+|-|.
T Consensus 191 g~g~p~~~~l~~v~~~~~~~--~iPVIA~G 218 (366)
T 4fo4_A 191 GVGVPQITAIADAAGVANEY--GIPVIADG 218 (366)
T ss_dssp CCCCCHHHHHHHHHHHHGGG--TCCEEEES
T ss_pred CcccchHHHHHHHHHHHhhc--CCeEEEeC
Confidence 11234455544433445 78999876
No 89
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=39.42 E-value=26 Score=29.03 Aligned_cols=56 Identities=13% Similarity=0.213 Sum_probs=27.5
Q ss_pred cCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCc-----ccccccCCCeEecCCHH
Q psy9483 54 RMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHP-----GLIQDYRGPVYLTPNKR 121 (186)
Q Consensus 54 ~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~-----~l~~~~~~~~iiTPh~~ 121 (186)
+.++++|+.|-|.--.. +.+.+.|+. +. +-.-++..+...| .|+. .+ .+++|||.+
T Consensus 220 k~gailIN~aRG~~vd~-~aL~~aL~~------g~---i~gA~lDV~~~EPl~~~~pL~~-~~-nvilTPHia 280 (315)
T 3pp8_A 220 PDGAYVLNLARGVHVQE-ADLLAALDS------GK---LKGAMLDVFSQEPLPQESPLWR-HP-RVAMTPHIA 280 (315)
T ss_dssp CTTEEEEECSCGGGBCH-HHHHHHHHH------TS---EEEEEESCCSSSSCCTTCGGGG-CT-TEEECSSCS
T ss_pred CCCCEEEECCCChhhhH-HHHHHHHHh------CC---ccEEEcCCCCCCCCCCCChhhc-CC-CEEECCCCC
Confidence 36788888875533222 223344432 21 1222333333222 2333 33 499999976
No 90
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=37.82 E-value=23 Score=29.46 Aligned_cols=13 Identities=15% Similarity=0.358 Sum_probs=9.7
Q ss_pred cCcEEEEccCCCC
Q psy9483 54 RMHSVLIGPGLGT 66 (186)
Q Consensus 54 ~~~aivIGpGlg~ 66 (186)
+.++++|+.|-|.
T Consensus 226 k~ga~lIn~arg~ 238 (333)
T 1j4a_A 226 KQDVVIVNVSRGP 238 (333)
T ss_dssp CTTEEEEECSCGG
T ss_pred CCCcEEEECCCCc
Confidence 4688888888664
No 91
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=37.75 E-value=95 Score=27.16 Aligned_cols=86 Identities=21% Similarity=0.274 Sum_probs=46.0
Q ss_pred chhhcccceeEEEecCC-------chhhhhhcCCceEEecccCCCcchHHHHHHhc-ccCcEEEEccCCCCCH-------
Q psy9483 4 ILQCATVTLSIYVCSEG-------AVPILKNYSPELIVLPHYLDRNDSVDHIMYWM-NRMHSVLIGPGLGTEP------- 68 (186)
Q Consensus 4 ~~~r~GaGlv~v~~~~~-------~~~~~~~~~Pe~~v~~~~~~~~~~~~~~~~~~-~~~~aivIGpGlg~~~------- 68 (186)
++..+|+..+.+-+... ....++...|+..+..-.-.+ .+++.... ..+|++++|.|=|..-
T Consensus 236 ~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~g~v~t---~e~a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g 312 (490)
T 4avf_A 236 ALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGGNIAT---AEAAKALAEAGADAVKVGIGPGSICTTRIVAG 312 (490)
T ss_dssp HHHHTTCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEEEEEECS---HHHHHHHHHTTCSEEEECSSCSTTCHHHHHTC
T ss_pred HHhhcccceEEecccCCcchhHHHHHHHHHHHCCCceEEEeeeCc---HHHHHHHHHcCCCEEEECCCCCcCCCccccCC
Confidence 45677888887754433 223455666774222110111 23333222 3599999975443321
Q ss_pred ---HHHHHHHHHHHHHHhcCCCCCEEEec
Q psy9483 69 ---LVQSNVISIIHKLKAANLNVPLVIDA 94 (186)
Q Consensus 69 ---~~~~~~~~~l~~~~~~~~~~p~VlDa 94 (186)
.....+.++.+.+++. ++|+|-|.
T Consensus 313 ~g~p~~~~l~~v~~~~~~~--~iPVIa~G 339 (490)
T 4avf_A 313 VGVPQISAIANVAAALEGT--GVPLIADG 339 (490)
T ss_dssp BCCCHHHHHHHHHHHHTTT--TCCEEEES
T ss_pred CCccHHHHHHHHHHHhccC--CCcEEEeC
Confidence 1334555665555445 78999886
No 92
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=37.26 E-value=3.9 Score=28.87 Aligned_cols=79 Identities=4% Similarity=-0.101 Sum_probs=42.4
Q ss_pred hhcccceeEEEecCCchhhhhhcCCceEEecccCCCcchHHHHHHhcccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcC
Q psy9483 6 QCATVTLSIYVCSEGAVPILKNYSPELIVLPHYLDRNDSVDHIMYWMNRMHSVLIGPGLGTEPLVQSNVISIIHKLKAAN 85 (186)
Q Consensus 6 ~r~GaGlv~v~~~~~~~~~~~~~~Pe~~v~~~~~~~~~~~~~~~~~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~ 85 (186)
+..++|..|-+..+........+--|+-+...+ ..++.+..+.+|++++||=+.- ..+-+++.. ...
T Consensus 11 L~C~aGmSTsllv~km~~~a~~~gi~v~i~a~~------~~~~~~~~~~~DvvLLgPQV~y---~~~~ik~~~---~~~- 77 (108)
T 3nbm_A 11 VLCAGSGTSAQLANAINEGANLTEVRVIANSGA------YGAHYDIMGVYDLIILAPQVRS---YYREMKVDA---ERL- 77 (108)
T ss_dssp EEESSSSHHHHHHHHHHHHHHHHTCSEEEEEEE------TTSCTTTGGGCSEEEECGGGGG---GHHHHHHHH---TTT-
T ss_pred EECCCCCCHHHHHHHHHHHHHHCCCceEEEEcc------hHHHHhhccCCCEEEEChHHHH---HHHHHHHHh---hhc-
Confidence 345566666555566555555544444332221 1122334567999999995431 223343333 223
Q ss_pred CCCCE-EEeccccc
Q psy9483 86 LNVPL-VIDADGLK 98 (186)
Q Consensus 86 ~~~p~-VlDadal~ 98 (186)
++|+ |+|+..+.
T Consensus 78 -~ipV~vI~~~~Yg 90 (108)
T 3nbm_A 78 -GIQIVATRGMEYI 90 (108)
T ss_dssp -TCEEEECCHHHHH
T ss_pred -CCcEEEeCHHHhh
Confidence 6785 58887665
No 93
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=36.45 E-value=31 Score=28.99 Aligned_cols=56 Identities=21% Similarity=0.274 Sum_probs=28.5
Q ss_pred cCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCc----ccccccCCCeEecCCHH
Q psy9483 54 RMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHP----GLIQDYRGPVYLTPNKR 121 (186)
Q Consensus 54 ~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~----~l~~~~~~~~iiTPh~~ 121 (186)
+.++++|+.+-|.--.. +.+.+.|+. +. |-+-|+..+...| .|+. .+ .+|+|||.+
T Consensus 254 k~gailIN~aRG~~vde-~aL~~aL~~------g~---i~gA~LDVf~~EP~~~~pL~~-~~-nvilTPHia 313 (345)
T 4g2n_A 254 PEGAVVINISRGDLIND-DALIEALRS------KH---LFAAGLDVFANEPAIDPRYRS-LD-NIFLTPHIG 313 (345)
T ss_dssp CTTEEEEECSCGGGBCH-HHHHHHHHH------TS---EEEEEESCCTTTTSCCTTGGG-CT-TEEECCSCT
T ss_pred CCCcEEEECCCCchhCH-HHHHHHHHh------CC---ceEEEecCCCCCCCCCchHHh-CC-CEEEcCccC
Confidence 47888888875533222 233344432 22 2233333333332 2333 33 499999976
No 94
>3u80_A 3-dehydroquinate dehydratase, type II; structural genomics, center for structural genomics of infec diseases, csgid, unknown function; 1.60A {Bifidobacterium longum} SCOP: c.23.13.0
Probab=35.71 E-value=42 Score=25.14 Aligned_cols=43 Identities=19% Similarity=0.209 Sum_probs=23.9
Q ss_pred HHHHHHhcccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEE
Q psy9483 45 VDHIMYWMNRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLV 91 (186)
Q Consensus 45 ~~~~~~~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~V 91 (186)
++.+.+...++|.++||||--+... -.+++.++.+... +.|+|
T Consensus 61 Id~Ih~a~~~~dgiiINpgA~THtS--vAlrDAl~~l~~~--~~P~V 103 (151)
T 3u80_A 61 VRWMHQAADEKTPVVMNPAAFTHYS--YALADAAHMVIDE--NLPLM 103 (151)
T ss_dssp HHHHHHHHHHTCCEEEECTTCCSCC--HHHHHHHHHHHHT--TCCEE
T ss_pred HHHHHHhhhcCcEEEECcchhhhhh--HHHHHHHHHHhhc--CCCEE
Confidence 4444444456899999999765432 1233442222223 67875
No 95
>3lwz_A 3-dehydroquinate dehydratase; AROQ, IDP90771, amino- acid biosynthesis, aromatic amino acid biosynthesis, lyase, structural genomics; 1.65A {Yersinia pestis}
Probab=33.68 E-value=39 Score=25.41 Aligned_cols=41 Identities=17% Similarity=0.237 Sum_probs=25.0
Q ss_pred hHHHHHHhcccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEE
Q psy9483 44 SVDHIMYWMNRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLV 91 (186)
Q Consensus 44 ~~~~~~~~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~V 91 (186)
.++.+.+...++|.++||||--+... -.+++.+... +.|+|
T Consensus 63 LId~Ih~a~~~~dgiiINpgA~THtS--vAlrDAl~~~-----~~P~V 103 (153)
T 3lwz_A 63 LIDSIHQARGNTDFILINPAAFTHTS--VALRDALLGV-----QIPFI 103 (153)
T ss_dssp HHHHHHHHTTTCSEEEEECGGGGGTC--HHHHHHHHHH-----TCCEE
T ss_pred HHHHHHHhhhcCceEEEccccceech--HHHHHHHHhc-----CCCEE
Confidence 34555555567999999999554321 2344555443 67876
No 96
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=32.77 E-value=42 Score=29.08 Aligned_cols=14 Identities=21% Similarity=0.422 Sum_probs=10.4
Q ss_pred cCcEEEEccCCCCC
Q psy9483 54 RMHSVLIGPGLGTE 67 (186)
Q Consensus 54 ~~~aivIGpGlg~~ 67 (186)
+..+++|+.+-|.-
T Consensus 235 k~gailIN~aRG~v 248 (416)
T 3k5p_A 235 KKGAFLINNARGSD 248 (416)
T ss_dssp CTTEEEEECSCTTS
T ss_pred CCCcEEEECCCChh
Confidence 47888998886644
No 97
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=31.28 E-value=32 Score=28.97 Aligned_cols=58 Identities=12% Similarity=0.138 Sum_probs=29.1
Q ss_pred cCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCc-----cccccc-C--CCeEecCCHH
Q psy9483 54 RMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHP-----GLIQDY-R--GPVYLTPNKR 121 (186)
Q Consensus 54 ~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~-----~l~~~~-~--~~~iiTPh~~ 121 (186)
+.++++|+.|-|.--.. +.+.+.++. +. +-+-|+..+...| .++... + ..+++|||.+
T Consensus 248 k~ga~lIn~arG~~vd~-~aL~~aL~~------g~---i~gA~LDVf~~EP~~~~~pL~~~~~~~~~nvilTPHia 313 (364)
T 2j6i_A 248 KKGAWLVNTARGAICVA-EDVAAALES------GQ---LRGYGGDVWFPQPAPKDHPWRDMRNKYGAGNAMTPHYS 313 (364)
T ss_dssp CTTEEEEECSCGGGBCH-HHHHHHHHH------TS---EEEEEESCCSSSSCCTTCHHHHCCCTTSCCEEECCSCG
T ss_pred CCCCEEEECCCCchhCH-HHHHHHHHc------CC---CcEEEEecCCCCCCCCCChHHhccCCccCcEEECCccC
Confidence 46899999986632222 334344443 22 2233344443332 122211 2 0499999976
No 98
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=30.49 E-value=30 Score=28.69 Aligned_cols=13 Identities=15% Similarity=0.304 Sum_probs=9.9
Q ss_pred cCcEEEEccCCCC
Q psy9483 54 RMHSVLIGPGLGT 66 (186)
Q Consensus 54 ~~~aivIGpGlg~ 66 (186)
+..+++|+.|-|.
T Consensus 225 k~ga~lin~srg~ 237 (331)
T 1xdw_A 225 KDGAILVNCARGQ 237 (331)
T ss_dssp CTTEEEEECSCGG
T ss_pred CCCcEEEECCCcc
Confidence 4788999998653
No 99
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=29.82 E-value=1e+02 Score=24.04 Aligned_cols=86 Identities=14% Similarity=0.210 Sum_probs=45.2
Q ss_pred cchhhcccceeEEEecCC-----chhhhhhcCCceEEecccCCCcchHHHHHHhcccCcEEEE---ccCCCCC---HHHH
Q psy9483 3 GILQCATVTLSIYVCSEG-----AVPILKNYSPELIVLPHYLDRNDSVDHIMYWMNRMHSVLI---GPGLGTE---PLVQ 71 (186)
Q Consensus 3 ~~~~r~GaGlv~v~~~~~-----~~~~~~~~~Pe~~v~~~~~~~~~~~~~~~~~~~~~~aivI---GpGlg~~---~~~~ 71 (186)
+.|..+||+++++-.... ....++.+--.+.+. +...+ ..+.+.+++...|-+++ .||.+-- ++..
T Consensus 81 ~~~~~aGad~itvH~Ea~~~~~~~i~~i~~~G~k~gva-l~p~t--~~e~l~~~l~~~D~Vl~msv~pGf~Gq~f~~~~l 157 (228)
T 3ovp_A 81 KPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLA-IKPGT--SVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMM 157 (228)
T ss_dssp HHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTCEEEEE-ECTTS--CGGGTGGGGGGCSEEEEESSCTTTCSCCCCGGGH
T ss_pred HHHHHcCCCEEEEccCCchhHHHHHHHHHHcCCCEEEE-EcCCC--CHHHHHHHhccCCeEEEeeecCCCCCcccCHHHH
Confidence 357789999999965422 223444443344332 21121 23455556667888765 7887643 2233
Q ss_pred HHHHHHHHHHHhcCCCCCEEEecc
Q psy9483 72 SNVISIIHKLKAANLNVPLVIDAD 95 (186)
Q Consensus 72 ~~~~~~l~~~~~~~~~~p~VlDad 95 (186)
+.+++ +++...+.++.+|..
T Consensus 158 ~ki~~----lr~~~~~~~I~VdGG 177 (228)
T 3ovp_A 158 PKVHW----LRTQFPSLDIEVDGG 177 (228)
T ss_dssp HHHHH----HHHHCTTCEEEEESS
T ss_pred HHHHH----HHHhcCCCCEEEeCC
Confidence 33333 222211466778873
No 100
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=29.27 E-value=1.2e+02 Score=25.25 Aligned_cols=78 Identities=18% Similarity=0.174 Sum_probs=45.3
Q ss_pred chhhcccceeEEEecCCc------------------------hhhhhhcCCceEEecccCCCcchHHHHHHhcccCcEEE
Q psy9483 4 ILQCATVTLSIYVCSEGA------------------------VPILKNYSPELIVLPHYLDRNDSVDHIMYWMNRMHSVL 59 (186)
Q Consensus 4 ~~~r~GaGlv~v~~~~~~------------------------~~~~~~~~Pe~~v~~~~~~~~~~~~~~~~~~~~~~aiv 59 (186)
...++|+|-++++=.+.+ ...++...|++-+..+...-.+ ...+.+ ++.+|.|+
T Consensus 136 ~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~i~~-~~~~~~-~~~~DlVv 213 (353)
T 3h5n_A 136 ILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIALNIND-YTDLHK-VPEADIWV 213 (353)
T ss_dssp HHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEECCCCS-GGGGGG-SCCCSEEE
T ss_pred HHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEeecccCc-hhhhhH-hccCCEEE
Confidence 457899999999866532 2345566787765554211001 111333 67899988
Q ss_pred EccCCCCCHH-HHHHHHHHHHHHHhcCCCCCEE
Q psy9483 60 IGPGLGTEPL-VQSNVISIIHKLKAANLNVPLV 91 (186)
Q Consensus 60 IGpGlg~~~~-~~~~~~~~l~~~~~~~~~~p~V 91 (186)
.... +.+ ++..+.+... +. ++|+|
T Consensus 214 d~~D---n~~~~r~~ln~~c~---~~--~~p~i 238 (353)
T 3h5n_A 214 VSAD---HPFNLINWVNKYCV---RA--NQPYI 238 (353)
T ss_dssp ECCC---CSTTHHHHHHHHHH---HT--TCCEE
T ss_pred EecC---ChHHHHHHHHHHHH---Hh--CCCEE
Confidence 7652 333 5565655543 34 78986
No 101
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=29.08 E-value=79 Score=27.88 Aligned_cols=84 Identities=10% Similarity=0.086 Sum_probs=47.0
Q ss_pred hhhcccceeEEEecCCchh------hhhhc-CCceEEecccCCCcchHHHHHHhcccCcEEEEccC-----CCCCHHHHH
Q psy9483 5 LQCATVTLSIYVCSEGAVP------ILKNY-SPELIVLPHYLDRNDSVDHIMYWMNRMHSVLIGPG-----LGTEPLVQS 72 (186)
Q Consensus 5 ~~r~GaGlv~v~~~~~~~~------~~~~~-~Pe~~v~~~~~~~~~~~~~~~~~~~~~~aivIGpG-----lg~~~~~~~ 72 (186)
++..|++.+-+=..++... .+... ..++.+... -++.+.++.+.+.++.+|++.||+| ++. ++...
T Consensus 181 ~l~~gvD~I~lsfV~saeDv~~~~~~l~~~~~~~i~Iiak-IEt~eav~nldeI~~~sDgImVargDLgveig~-e~v~~ 258 (470)
T 1e0t_A 181 GCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISK-IENQEGLNNFDEILEASDGIMVARGDLGVEIPV-EEVIF 258 (470)
T ss_dssp HHHHTCSEEEESSCCSHHHHHHHHHHHHTTTCTTCEEEEE-ECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCH-HHHHH
T ss_pred HHHcCCCEEEECCCCCHHHHHHHHHHHHHhcCCCceEEEE-ECCHHHHHhHHHHHHHCCEEEECchHhhhhcCH-HHHHH
Confidence 4566777665544444433 22222 122322222 2334445555666666999999997 332 44455
Q ss_pred HHHHHHHHHHhcCCCCCEEE
Q psy9483 73 NVISIIHKLKAANLNVPLVI 92 (186)
Q Consensus 73 ~~~~~l~~~~~~~~~~p~Vl 92 (186)
..+.++..+++. ++|++.
T Consensus 259 ~qk~ii~~araa--GkpvI~ 276 (470)
T 1e0t_A 259 AQKMMIEKCIRA--RKVVIT 276 (470)
T ss_dssp HHHHHHHHHHHH--TCEEEE
T ss_pred HHHHHHHHHHHc--CCCEEE
Confidence 566777777777 888643
No 102
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=28.73 E-value=45 Score=27.68 Aligned_cols=60 Identities=17% Similarity=0.265 Sum_probs=28.7
Q ss_pred cCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCC-EEEecccccccccCcccccccCCCeEecCCHH
Q psy9483 54 RMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVP-LVIDADGLKLVAEHPGLIQDYRGPVYLTPNKR 121 (186)
Q Consensus 54 ~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p-~VlDadal~~l~~~~~l~~~~~~~~iiTPh~~ 121 (186)
+.++++|+.|-|.--.. +.+.+.|+. . +.. ..||--.--=++.+..++. .+ .+++|||.+
T Consensus 218 k~gailIN~aRG~~vd~-~aL~~aL~~---g--~i~gA~lDV~~~EPl~~~~pL~~-~~-nvilTPHia 278 (324)
T 3evt_A 218 KQQPMLINIGRGPAVDT-TALMTALDH---H--QLSMAALDVTEPEPLPTDHPLWQ-RD-DVLITPHIS 278 (324)
T ss_dssp CSCCEEEECSCGGGBCH-HHHHHHHHT---T--SCSEEEESSCSSSSCCTTCGGGG-CS-SEEECCSCT
T ss_pred CCCCEEEEcCCChhhhH-HHHHHHHHh---C--CceEEEeCCCCCCCCCCCChhhc-CC-CEEEcCccc
Confidence 46788888876543222 233344432 1 221 3455322211111223443 33 499999976
No 103
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=28.64 E-value=2.1e+02 Score=25.86 Aligned_cols=87 Identities=16% Similarity=0.244 Sum_probs=50.8
Q ss_pred chhhcccceeEEEecCCch-------hhhhhcCCceEEecccCCCcchHHHHHHhcccCcEEEEccCCCCC---------
Q psy9483 4 ILQCATVTLSIYVCSEGAV-------PILKNYSPELIVLPHYLDRNDSVDHIMYWMNRMHSVLIGPGLGTE--------- 67 (186)
Q Consensus 4 ~~~r~GaGlv~v~~~~~~~-------~~~~~~~Pe~~v~~~~~~~~~~~~~~~~~~~~~~aivIGpGlg~~--------- 67 (186)
+...+|++++.+=+..... ..++...|++.+..=+--+.+....+.+ ..+|++.+|.|-|.-
T Consensus 288 aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~~p~~~viaGNVaT~e~a~~Li~--aGAD~vkVGiGpGSiCtTr~v~Gv 365 (556)
T 4af0_A 288 LLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVIAGNVVTREQAAQLIA--AGADGLRIGMGSGSICITQEVMAV 365 (556)
T ss_dssp HHHHTTCCEEEECCSCCCSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHH--HTCSEEEECSSCSTTBCCTTTCCS
T ss_pred HHHhcCCcEEEEeccccccHHHHHHHHHHHhhCCcceEEeccccCHHHHHHHHH--cCCCEEeecCCCCcccccccccCC
Confidence 4567888888776655432 3455677876443311111222233332 359999999886532
Q ss_pred -HHHHHHHHHHHHHHHhcCCCCCEEEec
Q psy9483 68 -PLVQSNVISIIHKLKAANLNVPLVIDA 94 (186)
Q Consensus 68 -~~~~~~~~~~l~~~~~~~~~~p~VlDa 94 (186)
-.+...+.+..+.+++. ++|+|-|.
T Consensus 366 G~PQ~tAi~~~a~~a~~~--~vpvIADG 391 (556)
T 4af0_A 366 GRPQGTAVYAVAEFASRF--GIPCIADG 391 (556)
T ss_dssp CCCHHHHHHHHHHHHGGG--TCCEEEES
T ss_pred CCcHHHHHHHHHHHHHHc--CCCEEecC
Confidence 12334455555555666 89999997
No 104
>1gqo_A Dehydroquinase; dehydratase, lyase; 2.10A {Bacillus subtilis} SCOP: c.23.13.1
Probab=28.57 E-value=35 Score=25.38 Aligned_cols=41 Identities=15% Similarity=0.254 Sum_probs=25.4
Q ss_pred hHHHHHHhcccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEE
Q psy9483 44 SVDHIMYWMNRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLV 91 (186)
Q Consensus 44 ~~~~~~~~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~V 91 (186)
.++.+.+...++|.++||||--+... -.+++.+.. . +.|+|
T Consensus 56 Lid~Ih~a~~~~dgiiiNpgA~THtS--vAlrDAl~~---v--~~P~V 96 (143)
T 1gqo_A 56 LIDAIHEAEEQYSGIVLNPGALSHYS--YAIRDAVSS---I--SLPVV 96 (143)
T ss_dssp HHHHHHHHTTTCSEEEEECGGGGGTC--HHHHHHHHT---S--CSCEE
T ss_pred HHHHHHHhhhcCcEEEEccchhcccc--HHHHHHHHh---C--CCCEE
Confidence 45556655567999999998554321 234455543 3 67876
No 105
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=28.54 E-value=28 Score=28.95 Aligned_cols=14 Identities=7% Similarity=0.093 Sum_probs=10.5
Q ss_pred cCcEEEEccCCCCC
Q psy9483 54 RMHSVLIGPGLGTE 67 (186)
Q Consensus 54 ~~~aivIGpGlg~~ 67 (186)
+.++++|+.|-|.-
T Consensus 224 k~ga~lIn~srg~~ 237 (333)
T 1dxy_A 224 KPGAIVINTARPNL 237 (333)
T ss_dssp CTTEEEEECSCTTS
T ss_pred CCCcEEEECCCCcc
Confidence 46888998887754
No 106
>2him_A L-asparaginase 1; hydrolase; 1.82A {Escherichia coli} PDB: 2p2d_A 2p2n_A 3ntx_A* 2ocd_A
Probab=28.28 E-value=38 Score=28.69 Aligned_cols=42 Identities=14% Similarity=0.241 Sum_probs=30.9
Q ss_pred HHHHHhcccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEE
Q psy9483 46 DHIMYWMNRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVI 92 (186)
Q Consensus 46 ~~~~~~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~Vl 92 (186)
+.+.+..+.+|.+||==|+.+-+++..++...++. . ++|+||
T Consensus 93 ~~I~~~~~~~dG~VItHGTDTmeeTA~~Ls~~l~~---~--~kPVVl 134 (358)
T 2him_A 93 EDIKAHYDDYDGFVILHGTDTMAYTASALSFMLEN---L--GKPVIV 134 (358)
T ss_dssp HHHHHHGGGCSEEEEECCSTTHHHHHHHHHHHEET---C--CSCEEE
T ss_pred HHHHHHHhcCCeEEEecCchHHHHHHHHHHHHHhc---C--CCCEEE
Confidence 44555556799999999988878887766554432 3 799998
No 107
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=27.60 E-value=59 Score=26.54 Aligned_cols=60 Identities=15% Similarity=0.166 Sum_probs=29.0
Q ss_pred cCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCC-EEEecccccccccCcccccccCCCeEecCCHH
Q psy9483 54 RMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVP-LVIDADGLKLVAEHPGLIQDYRGPVYLTPNKR 121 (186)
Q Consensus 54 ~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p-~VlDadal~~l~~~~~l~~~~~~~~iiTPh~~ 121 (186)
+.++++|+.|-|.--.. +.+.+.++. . ... -.+|--.-.-++.+..|++. ..+|+|||.+
T Consensus 223 k~ga~lin~arg~~vd~-~aL~~aL~~---g--~i~ga~lDv~~~eP~~~~~~L~~~--~nviltPh~~ 283 (307)
T 1wwk_A 223 KKTAILINTSRGPVVDT-NALVKALKE---G--WIAGAGLDVFEEEPLPKDHPLTKF--DNVVLTPHIG 283 (307)
T ss_dssp CTTCEEEECSCGGGBCH-HHHHHHHHH---T--SSSEEEESCCSSSSCCTTCGGGGC--TTEEECSSCT
T ss_pred CCCeEEEECCCCcccCH-HHHHHHHHh---C--CCcEEEEecCCCCCCCCCChHHhC--CCEEECCccc
Confidence 46888888876532111 233344432 1 221 23443222112222245442 3499999986
No 108
>3kip_A 3-dehydroquinase, type II; lyase; 2.95A {Candida albicans}
Probab=27.30 E-value=50 Score=25.15 Aligned_cols=41 Identities=17% Similarity=0.203 Sum_probs=23.8
Q ss_pred hHHHHHHhc-ccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEE
Q psy9483 44 SVDHIMYWM-NRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLV 91 (186)
Q Consensus 44 ~~~~~~~~~-~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~V 91 (186)
.++.+.+.. .++|.++||||--+-.. -.+++.+... ++|+|
T Consensus 72 LId~Ih~A~~~~~dgIIINpgAyTHtS--vAlrDAL~~v-----~~P~V 113 (167)
T 3kip_A 72 IIDRIHEAKRQGVGFVVINAGAYTHTS--VGIRDALLGT-----AIPFI 113 (167)
T ss_dssp HHHHHHHHHHTTCCEEEEECGGGGGTC--HHHHHHHHHT-----TCCEE
T ss_pred HHHHHHHhhhcCccEEEEccccceecc--HHHHHHHHhc-----CCCEE
Confidence 345555444 56899999998554321 2344455433 67875
No 109
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=26.18 E-value=79 Score=25.54 Aligned_cols=50 Identities=18% Similarity=0.254 Sum_probs=28.2
Q ss_pred HHHHHhcccCcEEEEccCC-----CCC-HHHHHHHHHHHHHHHhcCCCCC---EEEecccc
Q psy9483 46 DHIMYWMNRMHSVLIGPGL-----GTE-PLVQSNVISIIHKLKAANLNVP---LVIDADGL 97 (186)
Q Consensus 46 ~~~~~~~~~~~aivIGpGl-----g~~-~~~~~~~~~~l~~~~~~~~~~p---~VlDadal 97 (186)
+++.+.+.++++-+|.+-+ ..+ ++..+.+++.+..+.+. +.+ +|+||.-.
T Consensus 115 ~~~~~~~a~~~~~vv~m~~d~~G~p~t~~~~~~~l~~~~~~a~~~--Gi~~~~IilDPg~g 173 (271)
T 2yci_X 115 DIFFPMAKKYEAAIIGLTMNEKGVPKDANDRSQLAMELVANADAH--GIPMTELYIDPLIL 173 (271)
T ss_dssp HHHHHHHHHHTCEEEEESCBTTBCCCSHHHHHHHHHHHHHHHHHT--TCCGGGEEEECCCC
T ss_pred HHHHHHHHHcCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHC--CCCcccEEEecCCC
Confidence 4455555556665555443 222 34455666666666555 555 88888543
No 110
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=26.10 E-value=46 Score=27.64 Aligned_cols=60 Identities=13% Similarity=0.225 Sum_probs=28.4
Q ss_pred cCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCC-EEEecccccccccCcccccccCCCeEecCCHH
Q psy9483 54 RMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVP-LVIDADGLKLVAEHPGLIQDYRGPVYLTPNKR 121 (186)
Q Consensus 54 ~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p-~VlDadal~~l~~~~~l~~~~~~~~iiTPh~~ 121 (186)
+.++++|+.|-|.--.. +.+.+.|+. . +.. -.||--.--=++.+..++. .+ .+|+|||.+
T Consensus 221 k~gailIN~aRG~~vde-~aL~~aL~~---g--~i~ga~lDV~~~EPl~~~~pL~~-~~-nvilTPHia 281 (324)
T 3hg7_A 221 KPGAILFNVGRGNAINE-GDLLTALRT---G--KLGMAVLDVFEQEPLPADSPLWG-QP-NLIITPHNS 281 (324)
T ss_dssp CTTCEEEECSCGGGBCH-HHHHHHHHT---T--SSSEEEESCCSSSSCCTTCTTTT-CT-TEEECCSCS
T ss_pred CCCcEEEECCCchhhCH-HHHHHHHHc---C--CceEEEeccCCCCCCCCCChhhc-CC-CEEEeCCCc
Confidence 46888888885533222 233344432 1 111 3455322211111212332 33 499999976
No 111
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=25.97 E-value=98 Score=23.76 Aligned_cols=49 Identities=16% Similarity=0.261 Sum_probs=31.3
Q ss_pred hHHHHHHhcccCcEEEEcc-CCCC-----C-HHHHHHHHHHHHHHHhcCCCCCEEEec
Q psy9483 44 SVDHIMYWMNRMHSVLIGP-GLGT-----E-PLVQSNVISIIHKLKAANLNVPLVIDA 94 (186)
Q Consensus 44 ~~~~~~~~~~~~~aivIGp-Glg~-----~-~~~~~~~~~~l~~~~~~~~~~p~VlDa 94 (186)
.++++.+.++...++.||. |+.- . +.....+...++.+.+. +.|+++=.
T Consensus 77 ~~~~l~~~~~~~~~~~iGE~Gld~~~~~~~~~~q~~~f~~~l~~a~~~--~lpv~iH~ 132 (264)
T 1xwy_A 77 TEEAIIELAAQPEVVAIGECGLDFNRNFSTPEEQERAFVAQLRIAADL--NMPVFMHC 132 (264)
T ss_dssp HHHHHHHHHTSTTEEEEEEEEEETTTCSSCHHHHHHHHHHHHHHHHHH--TCCEEEEE
T ss_pred HHHHHHHHhcCCCeEEEEEeccCCCCCCCcHHHHHHHHHHHHHHHHHh--CCcEEEEc
Confidence 3566777777667777773 4321 1 22234566777777777 89998865
No 112
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=25.95 E-value=90 Score=25.56 Aligned_cols=56 Identities=13% Similarity=0.204 Sum_probs=28.4
Q ss_pred cCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccC----cccccccCCCeEecCCHH
Q psy9483 54 RMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEH----PGLIQDYRGPVYLTPNKR 121 (186)
Q Consensus 54 ~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~----~~l~~~~~~~~iiTPh~~ 121 (186)
+.++++|+.|-|.--. .+.+.+.++. +. +-+.|+..+... ..|++. ..+|+|||.+
T Consensus 229 k~gailIn~arg~~vd-~~aL~~aL~~------g~---i~gA~lDv~~~eP~~~~~L~~~--~nviltPH~~ 288 (320)
T 1gdh_A 229 PQGAIVVNTARGDLVD-NELVVAALEA------GR---LAYAGFDVFAGEPNINEGYYDL--PNTFLFPHIG 288 (320)
T ss_dssp CTTEEEEECSCGGGBC-HHHHHHHHHH------TS---EEEEEESCCTTTTSCCTTGGGC--TTEEECSSCT
T ss_pred CCCcEEEECCCCcccC-HHHHHHHHHh------CC---CcEEEEeCCCCCCCCCChhhhC--CCEEECCcCC
Confidence 4689999998662211 1234444442 11 222333333222 234432 3599999976
No 113
>1gtz_A 3-dehydroquinate dehydratase; lyase, type II dehydroquinase, shikimate pathway, dodecameric quaternary structure; HET: DHK; 1.6A {Streptomyces coelicolor} SCOP: c.23.13.1 PDB: 2bt4_A* 1v1j_A* 2cjf_A* 1d0i_A 1gu0_A 1gu1_A*
Probab=25.81 E-value=47 Score=25.03 Aligned_cols=41 Identities=17% Similarity=0.270 Sum_probs=23.8
Q ss_pred hHHHHHHhcccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCC-CCEE
Q psy9483 44 SVDHIMYWMNRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLN-VPLV 91 (186)
Q Consensus 44 ~~~~~~~~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~-~p~V 91 (186)
.++.+.+...++|.++||||--+. +--.+++.+..+ + .|+|
T Consensus 62 LId~Ih~a~~~~dgiIINpgA~TH--tSvAlrDAl~~v-----~~~P~V 103 (156)
T 1gtz_A 62 LVDWIHEARLNHCGIVINPAAYSH--TSVAILDALNTC-----DGLPVV 103 (156)
T ss_dssp HHHHHHHHHHHCSEEEEECTTHHH--HCHHHHHHHHTS-----TTCCEE
T ss_pred HHHHHHHhhhcCcEEEECchhhcc--ccHHHHHHHHhc-----CCCCEE
Confidence 345555555569999999984322 122344555433 5 7775
No 114
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=25.60 E-value=1.9e+02 Score=25.49 Aligned_cols=84 Identities=10% Similarity=0.129 Sum_probs=50.7
Q ss_pred chhhcccceeEEEecCCchhh------hhhcCCce-EEecccCCCcchHHHHHHhcccCcEEEEccC-----CCCCHHHH
Q psy9483 4 ILQCATVTLSIYVCSEGAVPI------LKNYSPEL-IVLPHYLDRNDSVDHIMYWMNRMHSVLIGPG-----LGTEPLVQ 71 (186)
Q Consensus 4 ~~~r~GaGlv~v~~~~~~~~~------~~~~~Pe~-~v~~~~~~~~~~~~~~~~~~~~~~aivIGpG-----lg~~~~~~ 71 (186)
.++..|++++-+=..++..+. +.....++ ++.-+ ++.+.++.+.+.++.+|.+.|++| ++ .++..
T Consensus 191 ~~~~~~vD~Ia~SfVr~a~Dv~~~r~~l~~~g~~~~iiaKI--E~~eav~nldeIl~~sDgImVaRGDLgvei~-~e~v~ 267 (461)
T 3qtg_A 191 SPIRDNIDYVAISLAKSCKDVDSVRSLLTELGFQSQVAVKI--ETKGAVNNLEELVQCSDYVVVARGDLGLHYG-LDALP 267 (461)
T ss_dssp GGGGGGCCEEEECSCCSHHHHHHHHHHHHHTTCCCEEEEEE--CSHHHHHTHHHHHHTCSEEEEEHHHHTTTSC-TTTHH
T ss_pred HHhhcCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEEEEE--CCHHHHHhHHHHHHhcccEEEccccccccCC-HHHHH
Confidence 356677887777666665442 22222222 22222 334455556666777999999876 22 13455
Q ss_pred HHHHHHHHHHHhcCCCCCEEE
Q psy9483 72 SNVISIIHKLKAANLNVPLVI 92 (186)
Q Consensus 72 ~~~~~~l~~~~~~~~~~p~Vl 92 (186)
...++++..+++. ++|++.
T Consensus 268 ~~Qk~ii~~~~~~--gkpvi~ 286 (461)
T 3qtg_A 268 IVQRRIVHTSLKY--GKPIAV 286 (461)
T ss_dssp HHHHHHHHHHHHT--TCCEEE
T ss_pred HHHHHHHHHHHHh--CCCEEE
Confidence 5666788888888 899876
No 115
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=25.26 E-value=1.6e+02 Score=23.07 Aligned_cols=81 Identities=16% Similarity=0.135 Sum_probs=44.6
Q ss_pred chhhcccceeEEEecCCc------------------------hhhhhhcCCceEEecccCCCcchHHHHHHhcccCcEEE
Q psy9483 4 ILQCATVTLSIYVCSEGA------------------------VPILKNYSPELIVLPHYLDRNDSVDHIMYWMNRMHSVL 59 (186)
Q Consensus 4 ~~~r~GaGlv~v~~~~~~------------------------~~~~~~~~Pe~~v~~~~~~~~~~~~~~~~~~~~~~aiv 59 (186)
...++|+|-++++=.+.+ ...++...|+.-+..+...- ..+.+.+.++.+|.|+
T Consensus 46 ~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~--~~~~~~~~~~~~DvVi 123 (251)
T 1zud_1 46 YLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRL--TGEALKDAVARADVVL 123 (251)
T ss_dssp HHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC--CHHHHHHHHHHCSEEE
T ss_pred HHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEeccC--CHHHHHHHHhcCCEEE
Confidence 457899999998733321 12344556776554431110 1133445566789887
Q ss_pred EccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecc
Q psy9483 60 IGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDAD 95 (186)
Q Consensus 60 IGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDad 95 (186)
-... +.+++..+.+... +. ++|+| ++.
T Consensus 124 ~~~d---~~~~r~~l~~~~~---~~--~~p~i-~~~ 150 (251)
T 1zud_1 124 DCTD---NMATRQEINAACV---AL--NTPLI-TAS 150 (251)
T ss_dssp ECCS---SHHHHHHHHHHHH---HT--TCCEE-EEE
T ss_pred ECCC---CHHHHHHHHHHHH---Hh--CCCEE-EEe
Confidence 6642 4555555555443 34 78874 443
No 116
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=24.79 E-value=53 Score=28.15 Aligned_cols=14 Identities=36% Similarity=0.406 Sum_probs=10.8
Q ss_pred cCcEEEEccCCCCC
Q psy9483 54 RMHSVLIGPGLGTE 67 (186)
Q Consensus 54 ~~~aivIGpGlg~~ 67 (186)
+..+++|+.+-|.-
T Consensus 224 k~ga~lIN~aRg~~ 237 (404)
T 1sc6_A 224 KPGSLLINASRGTV 237 (404)
T ss_dssp CTTEEEEECSCSSS
T ss_pred CCCeEEEECCCChH
Confidence 47899999987653
No 117
>1nns_A L-asparaginase II; amidrohydrolase, crystallographic comparison hydrolase; 1.95A {Escherichia coli} SCOP: c.88.1.1 PDB: 3eca_A 1ho3_A 1jaz_A 1ihd_A 1jja_A 4eca_A*
Probab=24.75 E-value=54 Score=27.31 Aligned_cols=42 Identities=14% Similarity=0.133 Sum_probs=31.0
Q ss_pred HHHHHHhcccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEE
Q psy9483 45 VDHIMYWMNRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVI 92 (186)
Q Consensus 45 ~~~~~~~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~Vl 92 (186)
.+.+.+..+++|.+||==|+.+-+++..++...+. . ++|+||
T Consensus 70 a~~I~~~~~~~dG~VItHGTDTmeeTA~~Ls~~l~----~--~kPVVl 111 (326)
T 1nns_A 70 AKKINTDCDKTDGFVITHGTDTMEETAYFLDLTVK----C--DKPVVM 111 (326)
T ss_dssp HHHHHHHGGGCSEEEEECCSSSHHHHHHHHHHHCC----C--CSCEEE
T ss_pred HHHHHHHhhcCCcEEEEcCchhHHHHHHHHHHhcC----C--CCCEEE
Confidence 34455555667999999998888888777765442 3 799998
No 118
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=24.61 E-value=50 Score=22.65 Aligned_cols=54 Identities=26% Similarity=0.324 Sum_probs=31.6
Q ss_pred EEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCcccccccCCCeEecCCHH
Q psy9483 58 VLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHPGLIQDYRGPVYLTPNKR 121 (186)
Q Consensus 58 ivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~~l~~~~~~~~iiTPh~~ 121 (186)
+++|-|++++ -..+-++++++ +. +.++-+++..+.-+... .... ...+++|+..
T Consensus 8 l~Cg~G~sTS-~l~~k~~~~~~---~~--gi~~~i~a~~~~~~~~~---~~~~-Dvil~~pqv~ 61 (106)
T 1e2b_A 8 LFSSAGMSTS-LLVSKMRAQAE---KY--EVPVIIEAFPETLAGEK---GQNA-DVVLLGPQIA 61 (106)
T ss_dssp EECSSSTTTH-HHHHHHHHHHH---HS--CCSEEEEEECSSSTTHH---HHHC-SEEEECTTSG
T ss_pred EECCCchhHH-HHHHHHHHHHH---HC--CCCeEEEEecHHHHHhh---ccCC-CEEEEccchh
Confidence 6778888765 34445555544 35 78888888776543321 1122 2467788755
No 119
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=24.51 E-value=63 Score=26.87 Aligned_cols=56 Identities=13% Similarity=0.166 Sum_probs=28.8
Q ss_pred cCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCc----ccccccCCCeEecCCHH
Q psy9483 54 RMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHP----GLIQDYRGPVYLTPNKR 121 (186)
Q Consensus 54 ~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~----~l~~~~~~~~iiTPh~~ 121 (186)
+.++++|+.|-|.--.. +.+.+.++. +. +-+.++..+...| .+++ . ..+|+|||.+
T Consensus 246 k~gailIN~arg~vvd~-~aL~~aL~~------g~---i~gA~lDV~~~EP~~~~~L~~-~-~nvilTPH~~ 305 (335)
T 2g76_A 246 KKGVRVVNCARGGIVDE-GALLRALQS------GQ---CAGAALDVFTEEPPRDRALVD-H-ENVISCPHLG 305 (335)
T ss_dssp CTTEEEEECSCTTSBCH-HHHHHHHHH------TS---EEEEEESCCSSSSCSCCHHHH-S-TTEEECSSCT
T ss_pred CCCcEEEECCCccccCH-HHHHHHHHh------CC---ccEEEEeecCCCCCCCchHHh-C-CCEEECCcCC
Confidence 47899999887643222 233344442 11 2222223333332 2333 2 3499999976
No 120
>2uyg_A 3-dehydroquinate dehydratase; typeii 3-dehydroquinase, lyase; 2.2A {Thermus thermophilus}
Probab=24.38 E-value=46 Score=24.87 Aligned_cols=41 Identities=15% Similarity=0.282 Sum_probs=24.2
Q ss_pred hHHHHHHhccc-CcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEE
Q psy9483 44 SVDHIMYWMNR-MHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLV 91 (186)
Q Consensus 44 ~~~~~~~~~~~-~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~V 91 (186)
.++.+.+.... +|.++||||--+... -.+++.+.. . +.|+|
T Consensus 55 LId~Ih~a~~~~~dgiIINpgA~THtS--vAlrDAl~~---v--~~P~V 96 (149)
T 2uyg_A 55 LIEWVQQAHQEGFLAIVLNPGALTHYS--YALLDAIRA---Q--PLPVV 96 (149)
T ss_dssp HHHHHHHTTTTTCSEEEEECGGGGGTC--HHHHHHHHT---S--CSCEE
T ss_pred HHHHHHHhccCCeeEEEEccchhcccc--HHHHHHHHh---C--CCCEE
Confidence 34555555455 889999998554332 234455543 2 67875
No 121
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=24.33 E-value=43 Score=27.81 Aligned_cols=13 Identities=31% Similarity=0.585 Sum_probs=10.2
Q ss_pred cCcEEEEccCCCC
Q psy9483 54 RMHSVLIGPGLGT 66 (186)
Q Consensus 54 ~~~aivIGpGlg~ 66 (186)
+.++++|+.|-|.
T Consensus 227 k~gailIN~arg~ 239 (330)
T 4e5n_A 227 RPGALLVNPCRGS 239 (330)
T ss_dssp CTTEEEEECSCGG
T ss_pred CCCcEEEECCCCc
Confidence 4789999998664
No 122
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=24.32 E-value=1.3e+02 Score=27.39 Aligned_cols=83 Identities=13% Similarity=0.238 Sum_probs=49.5
Q ss_pred hhcccceeEEEecCCchh------hhhhcCCceEEecccCCCcchHHHHHHhcccCcEEEEccC-----CCCCHHHHHHH
Q psy9483 6 QCATVTLSIYVCSEGAVP------ILKNYSPELIVLPHYLDRNDSVDHIMYWMNRMHSVLIGPG-----LGTEPLVQSNV 74 (186)
Q Consensus 6 ~r~GaGlv~v~~~~~~~~------~~~~~~Pe~~v~~~~~~~~~~~~~~~~~~~~~~aivIGpG-----lg~~~~~~~~~ 74 (186)
+..|++++-+=..++... .+.....++.+... -++.+.++.+.+.++.+|.+.|++| ++ .++.....
T Consensus 203 ~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~~~~i~IiaK-IE~~eav~nldeIl~~sDGImVARGDLgvei~-~e~vp~~Q 280 (606)
T 3t05_A 203 IKENVDFIAASFVRRPSDVLEIREILEEQKANISVFPK-IENQEGIDNIEEILEVSDGLMVARGDMGVEIP-PEKVPMVQ 280 (606)
T ss_dssp HHTTCSEEEETTCCSHHHHHHHHHHHHHTTCCCEEEEC-CCSHHHHHTHHHHHHHCSCEEEEHHHHHHHSC-GGGHHHHH
T ss_pred HHcCCCEEEECCCCCHHHHHHHHHHHHhcCCCCeEEEE-eCCHHHHHhHHHHHHhCCEEEEccccccCcCC-HHHHHHHH
Confidence 456777776665665543 22222223322222 2334445556666667999999877 33 24455566
Q ss_pred HHHHHHHHhcCCCCCEEE
Q psy9483 75 ISIIHKLKAANLNVPLVI 92 (186)
Q Consensus 75 ~~~l~~~~~~~~~~p~Vl 92 (186)
+++++.+++. ++|+++
T Consensus 281 k~ii~~~~~~--gkpvi~ 296 (606)
T 3t05_A 281 KDLIRQCNKL--GKPVIT 296 (606)
T ss_dssp HHHHHHHHHH--TCCEEE
T ss_pred HHHHHHHHHc--CCCeEE
Confidence 7788888888 899987
No 123
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=23.19 E-value=52 Score=27.88 Aligned_cols=55 Identities=9% Similarity=0.091 Sum_probs=28.3
Q ss_pred cCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccCc-----ccccccCCCeEecCCHH
Q psy9483 54 RMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEHP-----GLIQDYRGPVYLTPNKR 121 (186)
Q Consensus 54 ~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~~-----~l~~~~~~~~iiTPh~~ 121 (186)
+.++++|+.+-|.--.. +.+.+.|+. +. + -| |+..+...| .++. .+ .+++|||.+
T Consensus 257 k~gailIN~aRG~~vde-~aL~~aL~~------g~-i--~a-aLDV~~~EPl~~~~pL~~-~~-nvilTPHia 316 (365)
T 4hy3_A 257 RRGAAFILLSRADVVDF-DALMAAVSS------GH-I--VA-ASDVYPEEPLPLDHPVRS-LK-GFIRSAHRA 316 (365)
T ss_dssp CTTCEEEECSCGGGSCH-HHHHHHHHT------TS-S--EE-EESCCSSSSCCTTCGGGT-CT-TEEECCSCS
T ss_pred CCCcEEEECcCCchhCH-HHHHHHHHc------CC-c--eE-EeeCCCCCCCCCCChhhc-CC-CEEECCccc
Confidence 47788888875533222 233344432 11 1 12 555554433 2332 33 499999976
No 124
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=22.69 E-value=43 Score=27.48 Aligned_cols=13 Identities=0% Similarity=0.210 Sum_probs=9.7
Q ss_pred cCcEEEEccCCCC
Q psy9483 54 RMHSVLIGPGLGT 66 (186)
Q Consensus 54 ~~~aivIGpGlg~ 66 (186)
+.++++|+.|-|.
T Consensus 223 k~ga~lIn~arg~ 235 (313)
T 2ekl_A 223 KDNVIIVNTSRAV 235 (313)
T ss_dssp CTTEEEEESSCGG
T ss_pred CCCCEEEECCCCc
Confidence 3688999988663
No 125
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=22.37 E-value=2.7e+02 Score=22.86 Aligned_cols=35 Identities=20% Similarity=0.305 Sum_probs=23.4
Q ss_pred cCcEEEEccCCCCC--HHHHHHHHHHHHHHHh-cCCCCCEEE-ec
Q psy9483 54 RMHSVLIGPGLGTE--PLVQSNVISIIHKLKA-ANLNVPLVI-DA 94 (186)
Q Consensus 54 ~~~aivIGpGlg~~--~~~~~~~~~~l~~~~~-~~~~~p~Vl-Da 94 (186)
..|++.|| =++.. ++ .+.++++.+++ . +.|+|| =+
T Consensus 66 GtDai~VG-S~~vt~~~~---~~~~~v~~ik~~~--~lPvil~fP 104 (286)
T 3vk5_A 66 GFAAVLLA-STDYESFES---HMEPYVAAVKAAT--PLPVVLHFP 104 (286)
T ss_dssp TCSCEEEE-CSCCSSHHH---HHHHHHHHHHHHC--SSCEEEECC
T ss_pred CCCEEEEc-cCCCCcchH---HHHHHHHHHHHhC--CCCEEEECC
Confidence 59999999 56555 32 33344444554 5 899999 66
No 126
>2c4w_A 3-dehydroquinate dehydratase; 3-dehydroquinase, shikimate pathway, aromatic amino acid biosynthesis, lyase, sulphonamide; HET: GAJ; 1.55A {Helicobacter pylori} PDB: 2c57_A* 2xda_A* 1j2y_A* 2wks_A* 2xb9_A* 2c4v_A* 2xd9_A*
Probab=21.49 E-value=52 Score=25.24 Aligned_cols=40 Identities=20% Similarity=0.334 Sum_probs=21.4
Q ss_pred HHHHHHhccc-CcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEE
Q psy9483 45 VDHIMYWMNR-MHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLV 91 (186)
Q Consensus 45 ~~~~~~~~~~-~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~V 91 (186)
++.+.+.... +|.++||||--+... -.+++.+.. . .+|+|
T Consensus 68 Id~Ih~a~~~~~dgIIINpgAyTHtS--vAlrDAl~~---v--~~P~V 108 (176)
T 2c4w_A 68 IDKIQESVGSEYEGIIINPGAFSHTS--IAIADAIML---A--GKPVI 108 (176)
T ss_dssp HHHHHHHHSSSCCEEEEECGGGGGTC--HHHHHHHHT---S--SSCEE
T ss_pred HHHHHHhccCCeeEEEECcchhccch--HHHHHHHHh---C--CCCEE
Confidence 4444444445 788888887543321 234444443 2 66765
No 127
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=20.91 E-value=2.9e+02 Score=21.18 Aligned_cols=81 Identities=17% Similarity=0.154 Sum_probs=41.6
Q ss_pred hhhcccceeEEEecCCch--hhhhhcCCceEEecccCCCcchHHHHHHhcccCcEEEEccCCCCCHHHHHHHHHHHHH--
Q psy9483 5 LQCATVTLSIYVCSEGAV--PILKNYSPELIVLPHYLDRNDSVDHIMYWMNRMHSVLIGPGLGTEPLVQSNVISIIHK-- 80 (186)
Q Consensus 5 ~~r~GaGlv~v~~~~~~~--~~~~~~~Pe~~v~~~~~~~~~~~~~~~~~~~~~~aivIGpGlg~~~~~~~~~~~~l~~-- 80 (186)
|+..| |.+.-+.|+... +.-..+.++.++... ..+.-.-+++.+|++++=|| .--|.+.+-+++.-
T Consensus 73 A~~~G-G~viGv~p~~l~~~e~~~~~~~~~i~~~~------~~~Rk~~m~~~sda~IalPG---G~GTldEl~e~lt~~q 142 (199)
T 3qua_A 73 ARAKG-GHTVGVIPKALVHRELADVDAAELIVTDT------MRERKREMEHRSDAFIALPG---GIGTLEEFFEAWTAGY 142 (199)
T ss_dssp HHHTT-CCEEEEEEGGGTTTTTBCTTSSEEEEESS------HHHHHHHHHHHCSEEEECSC---CHHHHHHHHHHHHHHH
T ss_pred HHHcC-CcEEEEeCchhhhccccCCCCCeeEEcCC------HHHHHHHHHHhcCccEEeCC---CccHHHHHHHHHHHHH
Confidence 33433 455555666432 222344555554332 12222335677999999887 34455545454432
Q ss_pred HHhcCCCCCEE-Eecccc
Q psy9483 81 LKAANLNVPLV-IDADGL 97 (186)
Q Consensus 81 ~~~~~~~~p~V-lDadal 97 (186)
+... ++|+| ++.++.
T Consensus 143 lg~~--~kPvvlln~~gf 158 (199)
T 3qua_A 143 LGMH--DKPLILLDPFGH 158 (199)
T ss_dssp TTSC--CCCEEEECTTST
T ss_pred hccC--CCCEEEEcCCcc
Confidence 2123 67865 676665
No 128
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=20.89 E-value=38 Score=28.44 Aligned_cols=14 Identities=21% Similarity=0.202 Sum_probs=10.2
Q ss_pred cCcEEEEccCCCCC
Q psy9483 54 RMHSVLIGPGLGTE 67 (186)
Q Consensus 54 ~~~aivIGpGlg~~ 67 (186)
+.++++|+.|-|.-
T Consensus 227 k~gailIN~aRg~~ 240 (343)
T 2yq5_A 227 KKSAYLINCARGEL 240 (343)
T ss_dssp CTTCEEEECSCGGG
T ss_pred CCCcEEEECCCChh
Confidence 47888998886543
No 129
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=20.88 E-value=34 Score=28.46 Aligned_cols=13 Identities=23% Similarity=0.250 Sum_probs=9.8
Q ss_pred cCcEEEEccCCCC
Q psy9483 54 RMHSVLIGPGLGT 66 (186)
Q Consensus 54 ~~~aivIGpGlg~ 66 (186)
+.++++|+.|-|.
T Consensus 221 k~gailIN~aRg~ 233 (334)
T 2pi1_A 221 KDGVYLINTARGK 233 (334)
T ss_dssp CTTEEEEECSCGG
T ss_pred CCCcEEEECCCCc
Confidence 4788999888654
No 130
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=20.84 E-value=1.1e+02 Score=22.94 Aligned_cols=104 Identities=14% Similarity=-0.008 Sum_probs=49.2
Q ss_pred chhhcccceeEEEecCCchhhhhhcCCceEEecccCCCcchHHHHHHhcccCcEEEEccCCCCCHHHHHHHHHHHHHHHh
Q psy9483 4 ILQCATVTLSIYVCSEGAVPILKNYSPELIVLPHYLDRNDSVDHIMYWMNRMHSVLIGPGLGTEPLVQSNVISIIHKLKA 83 (186)
Q Consensus 4 ~~~r~GaGlv~v~~~~~~~~~~~~~~Pe~~v~~~~~~~~~~~~~~~~~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~ 83 (186)
+|+..| |.+.-+.|+...+.......|.++...-... . .-++..+|++++=|| + ..|.+.+.+.+.
T Consensus 64 gAl~~g-G~tigVlP~~~~~~~~~~~~~~i~~~~~~~R----k--~~m~~~sda~IvlpG-g--~GTL~E~~~al~---- 129 (176)
T 2iz6_A 64 GAKEAG-GTTIGVLPGPDTSEISDAVDIPIVTGLGSAR----D--NINALSSNVLVAVGM-G--PGTAAEVALALK---- 129 (176)
T ss_dssp HHHHTT-CCEEEEECC-----CCTTCSEEEECCCCSSS----C--CCCGGGCSEEEEESC-C--HHHHHHHHHHHH----
T ss_pred HHHHcC-CEEEEEeCchhhhhhccCCceeEEcCCHHHH----H--HHHHHhCCEEEEecC-C--ccHHHHHHHHHH----
Confidence 355555 4555556766333333444555443321111 1 113456899888887 3 445554545543
Q ss_pred cCCCCCEEEecccccccccCccccc-ccCCCeEecCCHHHHhhhc
Q psy9483 84 ANLNVPLVIDADGLKLVAEHPGLIQ-DYRGPVYLTPNKREYENLL 127 (186)
Q Consensus 84 ~~~~~p~VlDadal~~l~~~~~l~~-~~~~~~iiTPh~~E~~rL~ 127 (186)
. ++|+++=+. +-. ...+++ ......+++..+.|+-..+
T Consensus 130 ~--~kpV~~l~~--~~~--~~gfi~~~~~~~i~~~~~~~e~~~~l 168 (176)
T 2iz6_A 130 A--KKPVVLLGT--QPE--AEKFFTSLDAGLVHVAADVAGAIAAV 168 (176)
T ss_dssp T--TCCEEEESC--CHH--HHHHHHHHCTTTEEEESSHHHHHHHH
T ss_pred h--CCcEEEEcC--ccc--ccccCChhhcCeEEEcCCHHHHHHHH
Confidence 3 789765443 111 111221 1123467777777765443
No 131
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=20.83 E-value=74 Score=26.01 Aligned_cols=59 Identities=10% Similarity=0.111 Sum_probs=29.4
Q ss_pred cCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCC-EEEecccccccccCcccccccCCCeEecCCHH
Q psy9483 54 RMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVP-LVIDADGLKLVAEHPGLIQDYRGPVYLTPNKR 121 (186)
Q Consensus 54 ~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p-~VlDadal~~l~~~~~l~~~~~~~~iiTPh~~ 121 (186)
+.++++|+.+-+.--.. +.+.+.++ . ... -.+|.-.-.-++.+..|++. ..+|+|||.+
T Consensus 220 k~ga~lin~srg~~vd~-~aL~~aL~----g--~i~ga~lDv~~~eP~~~~~~L~~~--~nviltPh~~ 279 (311)
T 2cuk_A 220 KRGAILLNTARGALVDT-EALVEALR----G--HLFGAGLDVTDPEPLPPGHPLYAL--PNAVITPHIG 279 (311)
T ss_dssp CTTCEEEECSCGGGBCH-HHHHHHHT----T--TSSEEEESSCSSSSCCTTSGGGGC--TTEEECCSCT
T ss_pred CCCcEEEECCCCCccCH-HHHHHHHh----C--cCCEEEEeeCCCCCCCCCChhhhC--CCEEECCcCC
Confidence 46888888876532111 22333332 1 222 34554332222223345542 3599999986
No 132
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=20.73 E-value=49 Score=27.01 Aligned_cols=13 Identities=8% Similarity=0.148 Sum_probs=9.5
Q ss_pred cCcEEEEccCCCC
Q psy9483 54 RMHSVLIGPGLGT 66 (186)
Q Consensus 54 ~~~aivIGpGlg~ 66 (186)
+.++++|+.|-|.
T Consensus 200 k~gailIN~aRG~ 212 (290)
T 3gvx_A 200 RKNLTIVNVARAD 212 (290)
T ss_dssp CTTCEEEECSCGG
T ss_pred hcCceEEEeehhc
Confidence 4788888887554
No 133
>3cf4_G Acetyl-COA decarboxylase/synthase epsilon subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=20.54 E-value=1.4e+02 Score=21.74 Aligned_cols=53 Identities=17% Similarity=0.309 Sum_probs=35.2
Q ss_pred HHHHHHhcccC--cEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEecccccccccC
Q psy9483 45 VDHIMYWMNRM--HSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLVAEH 103 (186)
Q Consensus 45 ~~~~~~~~~~~--~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l~~~ 103 (186)
++++.+.++++ =.+++|.|..+ ....+.+.++.+. . +.|++--.-+...+.++
T Consensus 24 v~~aa~~L~~AkrPvil~G~g~~~-~~a~~~l~~lae~---~--~iPV~~t~~gkg~~~~~ 78 (170)
T 3cf4_G 24 PEMAAKIISKAKRPLLMVGTLALD-PELLDRVVKISKA---A--NIPIAATGSSLAVLADK 78 (170)
T ss_dssp HHHHHHHHHHCSSEEEEECSTTCC-HHHHHHHHHHHHH---H--TCCEEECTTTHHHHTTS
T ss_pred HHHHHHHHHcCCCCEEEECCCccc-hhHHHHHHHHHHH---h--CCCEEECcccCcccCCC
Confidence 56666666544 48889998764 4455556666654 3 89998777777666654
No 134
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=20.43 E-value=1.3e+02 Score=20.61 Aligned_cols=39 Identities=13% Similarity=0.250 Sum_probs=22.1
Q ss_pred EEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEeccccccc
Q psy9483 57 SVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVIDADGLKLV 100 (186)
Q Consensus 57 aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~VlDadal~~l 100 (186)
.+++|.|++++.-...-+++.++. . +..+.+++..+.-+
T Consensus 25 lvvC~sG~gTS~ll~~kl~~~~~~---~--gi~~~V~~~~~~~~ 63 (113)
T 1tvm_A 25 IVACGGAVATSTMAAEEIKELCQS---H--NIPVELIQCRVNEI 63 (113)
T ss_dssp EEESCSCSSHHHHHHHHHHHHHHH---T--TCCEEEEEECTTTT
T ss_pred EEECCCCHHHHHHHHHHHHHHHHH---c--CCeEEEEEecHHHH
Confidence 566777777554334445555443 3 56666777555433
No 135
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=20.31 E-value=89 Score=23.39 Aligned_cols=35 Identities=26% Similarity=0.480 Sum_probs=19.6
Q ss_pred ccCcEEEEccCCCCCHHHHHHHHH--HHHHHHhcCCCCCE
Q psy9483 53 NRMHSVLIGPGLGTEPLVQSNVIS--IIHKLKAANLNVPL 90 (186)
Q Consensus 53 ~~~~aivIGpGlg~~~~~~~~~~~--~l~~~~~~~~~~p~ 90 (186)
+.+|.+++ ||-|........+.. +++.+.+. ++|+
T Consensus 39 ~~~D~lil-PG~g~~~~~~~~~~~~~~i~~~~~~--~~Pv 75 (211)
T 4gud_A 39 LAADKLFL-PGVGTASEAMKNLTERDLIELVKRV--EKPL 75 (211)
T ss_dssp HHCSEEEE-CCCSCHHHHHHHHHHTTCHHHHHHC--CSCE
T ss_pred hCCCEEEE-CCCCCHHHHHHHHHhcChHHHHHHc--CCCE
Confidence 45899999 886654333332221 23444445 7785
No 136
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=20.20 E-value=1.3e+02 Score=27.01 Aligned_cols=84 Identities=14% Similarity=0.169 Sum_probs=47.7
Q ss_pred hhhcccceeEEEecCCchhh--hhh----cCCce-EEecccCCCcchHHHHHHhcccCcEEEEccC-CC--C-CHHHHHH
Q psy9483 5 LQCATVTLSIYVCSEGAVPI--LKN----YSPEL-IVLPHYLDRNDSVDHIMYWMNRMHSVLIGPG-LG--T-EPLVQSN 73 (186)
Q Consensus 5 ~~r~GaGlv~v~~~~~~~~~--~~~----~~Pe~-~v~~~~~~~~~~~~~~~~~~~~~~aivIGpG-lg--~-~~~~~~~ 73 (186)
+++.|++++-+=..++...+ ++. .-.++ ++.-+ ++.+.++.+.+.++.+|.+.|+.| || . .++....
T Consensus 226 ~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~g~~i~IIAKI--E~~eav~nldeIl~~sDGIMVARGDLgvEi~~e~vp~~ 303 (520)
T 3khd_A 226 AIPMGCNFIAASFIQSADDVRLIRNLLGPRGRHIKIIPKI--ENIEGIIHFDKILAESDGIMIARGDLGMEISPEKVFLA 303 (520)
T ss_dssp HHHHTCCEEEETTCCSHHHHHHHHHHHTTTTTTSEEEEEE--CSHHHHHTHHHHHHHSSCEEECHHHHTTTSCGGGHHHH
T ss_pred HHHcCCCEEEECCCCCHHHHHHHHHHHHhcCCCCcEEEEE--CCHHHHHhHHHHHHhCCcEEEccccccccCCHHHHHHH
Confidence 45567777766666655432 222 21222 22222 334445555666667899999876 11 1 1344455
Q ss_pred HHHHHHHHHhcCCCCCEEE
Q psy9483 74 VISIIHKLKAANLNVPLVI 92 (186)
Q Consensus 74 ~~~~l~~~~~~~~~~p~Vl 92 (186)
-++++..+++. ++|++.
T Consensus 304 Qk~iI~~c~~a--GKPVi~ 320 (520)
T 3khd_A 304 QKLMISKCNLQ--GKPIIT 320 (520)
T ss_dssp HHHHHHHHHHH--TCCEEE
T ss_pred HHHHHHHHHHc--CCCeEE
Confidence 56778888888 899874
No 137
>1h05_A 3-dehydroquinate dehydratase; shikimate pathway, alpha/beta protein, lyase, aromatic amino acid biosynthesis; 1.5A {Mycobacterium tuberculosis} SCOP: c.23.13.1 PDB: 1h0r_A* 1h0s_A* 2dhq_A 2xb8_A* 2y71_A* 2y76_A* 2y77_A* 3n76_A* 3n7a_A* 3n86_A* 3n87_A* 3n8n_A*
Probab=20.07 E-value=40 Score=25.10 Aligned_cols=40 Identities=18% Similarity=0.203 Sum_probs=21.1
Q ss_pred HHHHHHhcccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEE
Q psy9483 45 VDHIMYWMNRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLV 91 (186)
Q Consensus 45 ~~~~~~~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~V 91 (186)
++.+.+....+|.++||||--+... -.+++.+.. . +.|+|
T Consensus 59 Id~Ih~a~~~~dgiiINpgA~THtS--vAlrDAl~~---v--~~P~V 98 (146)
T 1h05_A 59 LDWIHQAADAAEPVILNAGGLTHTS--VALRDACAE---L--SAPLI 98 (146)
T ss_dssp HHHHHHHHHHTCCEEEECGGGGGTC--HHHHHHHHT---C--CSCEE
T ss_pred HHHHHHhhhcCcEEEECchhhcccc--HHHHHHHHh---C--CCCEE
Confidence 4444444455788888887543221 234444443 2 56765
No 138
>1wls_A L-asparaginase; structural genomics, hydrolase; 2.16A {Pyrococcus horikoshii} PDB: 1wnf_A
Probab=20.02 E-value=39 Score=28.21 Aligned_cols=42 Identities=17% Similarity=0.242 Sum_probs=29.9
Q ss_pred HHHHHhcccCcEEEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCEEE
Q psy9483 46 DHIMYWMNRMHSVLIGPGLGTEPLVQSNVISIIHKLKAANLNVPLVI 92 (186)
Q Consensus 46 ~~~~~~~~~~~aivIGpGlg~~~~~~~~~~~~l~~~~~~~~~~p~Vl 92 (186)
+.+.+..+.+|.+||==|+.+-+++..++..++.. . ++|+||
T Consensus 65 ~~I~~~~~~~dG~VItHGTDTmeeTA~~Ls~ll~~---~--~kPVVl 106 (328)
T 1wls_A 65 KEIEKEVWEYDGIVITHGTDTMAYSASMLSFMLRN---P--PIPIVL 106 (328)
T ss_dssp HHHHHHTTTCSEEEEECCGGGHHHHHHHHHHHEES---C--SSEEEE
T ss_pred HHHHHHhccCCeEEEEcCCchHHHHHHHHHHHHhC---C--CCCEEE
Confidence 44555556799999999987778776666533322 3 799998
Done!