BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9484
(407 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|328791078|ref|XP_395096.4| PREDICTED: retinoblastoma-family protein [Apis mellifera]
Length = 1040
Score = 318 bits (814), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 160/355 (45%), Positives = 219/355 (61%), Gaps = 36/355 (10%)
Query: 1 MGQLADNE--TAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVS 58
MGQ D E T +HQ+LC LN+D+T A EAW +Y+ + +YTLEG QLHW+GC+LYV+
Sbjct: 1 MGQSDDVEDSTYSRHQDLCQKLNMDATAASEAWKSYETIRQNYTLEGDQLHWIGCALYVA 60
Query: 59 CRKATVPTVNSNRT-IEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIAR 117
CRK+++PTV T +EGN V LT LL+ C + L QF K + WADM +P FRSKI +
Sbjct: 61 CRKSSIPTVGKTGTNVEGNCVSLTRLLQLCNLPLIQFFTKSKSWADMANMPQDFRSKIEK 120
Query: 118 LERNFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVL 177
LE NFAVS VIF KY P+F ++FK P +D++ R + K + CT +VFEF W LF+
Sbjct: 121 LEGNFAVSMVIFKKYQPIFTDIFKDP-VDDISRPPRSRRHKAMPCTPARVFEFCWTLFIC 179
Query: 178 TKAEYLDVSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDD 237
K + D+S+DLVNS+HLL+ CDLIY+N + + +D++NP+F G+PSNF D ++ P
Sbjct: 180 IKGAFPDISDDLVNSYHLLLVCCDLIYSNALLANRKDLLNPNFPGLPSNFNDENYTPPQT 239
Query: 238 PPCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIED 297
CI+S+LC+ H+ + V E L I K N
Sbjct: 240 ANCIVSLLCERHEAIAVEAKVIKEYYLKNHINKLFN------------------------ 275
Query: 298 SGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
E+ LRG+ + S ILE NFD N K +N++YE+++LSVGDFDERIFL
Sbjct: 276 --------ERVLRGDQSNFSGILEALNFDGNSKAINRVYEQHVLSVGDFDERIFL 322
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 41/52 (78%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
+IVRAE LSRD+VKHLN EE++L+SLAW S+SPLW I+ + + +P CE+
Sbjct: 568 IIVRAEDQLSRDVVKHLNQIEEKILESLAWQSDSPLWNAIQSTPEGVPSCEE 619
>gi|380025341|ref|XP_003696433.1| PREDICTED: LOW QUALITY PROTEIN: retinoblastoma-like protein 1-like
[Apis florea]
Length = 1039
Score = 318 bits (814), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 160/355 (45%), Positives = 219/355 (61%), Gaps = 36/355 (10%)
Query: 1 MGQLADNE--TAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVS 58
MGQ D E T +HQ+LC LN+D+T A EAW +Y+ + +YTLEG QLHW+GC+LYV+
Sbjct: 1 MGQSDDVEDSTYSRHQDLCQKLNMDATAASEAWKSYETIRQNYTLEGDQLHWIGCALYVA 60
Query: 59 CRKATVPTVNSNRT-IEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIAR 117
CRK+++PTV T +EGN V LT LL+ C + L QF K + WADM +P FRSKI +
Sbjct: 61 CRKSSIPTVGKTGTNVEGNCVSLTRLLQLCNLPLIQFFTKSKSWADMANMPQDFRSKIEK 120
Query: 118 LERNFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVL 177
LE NFAVS VIF KY P+F ++FK P +D++ R + K + CT +VFEF W LF+
Sbjct: 121 LEGNFAVSMVIFKKYQPIFTDIFKDP-VDDISRPPRSRRHKAMPCTPARVFEFCWTLFIC 179
Query: 178 TKAEYLDVSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDD 237
K + D+S+DLVNS+HLL+ CDLIY+N + + +D++NP+F G+PSNF D ++ P
Sbjct: 180 IKGAFPDISDDLVNSYHLLLVCCDLIYSNALLANRKDLLNPNFPGLPSNFNDENYTPPQT 239
Query: 238 PPCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIED 297
CI+S+LC+ H+ + V E L I K N
Sbjct: 240 ANCIVSLLCERHEAIAVEAKVIKEYYLKNHINKLFN------------------------ 275
Query: 298 SGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
E+ LRG+ + S ILE NFD N K +N++YE+++LSVGDFDERIFL
Sbjct: 276 --------ERVLRGDQSNFSGILEALNFDGNSKAINRVYEQHVLSVGDFDERIFL 322
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 41/52 (78%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
+IVRAE LSRD+VKHLN EE++L+SLAW S+SPLW I+ + + +P CE+
Sbjct: 568 IIVRAEDQLSRDVVKHLNQIEEKILESLAWQSDSPLWNAIQSTPEGVPSCEE 619
>gi|340722761|ref|XP_003399770.1| PREDICTED: retinoblastoma-like protein 1-like isoform 1 [Bombus
terrestris]
Length = 1007
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 158/355 (44%), Positives = 217/355 (61%), Gaps = 36/355 (10%)
Query: 1 MGQLADNE--TAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVS 58
MGQ D E T +HQ+LC LN+D+T A EAW +Y+ + +YTLEG QLHW+GC+LYV+
Sbjct: 1 MGQSDDVEDSTYSRHQDLCQKLNMDATAASEAWKSYETIRQNYTLEGDQLHWIGCALYVA 60
Query: 59 CRKATVPTVNSNRT-IEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIAR 117
CRK+++PTV T +EGN V LT LL+ C + L QF K + WADM + FRSKI +
Sbjct: 61 CRKSSIPTVGKTGTNVEGNCVSLTRLLQLCNLPLIQFFTKSKSWADMANMSQDFRSKIEK 120
Query: 118 LERNFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVL 177
LE NFAVS VIF KY P+F ++FK P +D++ R + K + CT +VFEF W LF+
Sbjct: 121 LEGNFAVSMVIFKKYQPIFTDIFKDP-VDDISRPPRSRRHKAMPCTPARVFEFCWTLFIC 179
Query: 178 TKAEYLDVSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDD 237
K + D+S+DLVNS+HLL+ CDLIY+N + + +D++NP+F G+PSNF D ++ P
Sbjct: 180 IKGAFPDISDDLVNSYHLLLVCCDLIYSNALLANRKDLLNPNFPGLPSNFNDENYTPPQT 239
Query: 238 PPCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIED 297
CI+S+LC+ H+ + V E L I K N
Sbjct: 240 ANCIVSLLCERHEAIAVEAKVIKEYYLKNHINKLFN------------------------ 275
Query: 298 SGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
E+ LRG+ + S ILE FD N K +N++YE+++LSVGDFDERIFL
Sbjct: 276 --------ERVLRGDQTNFSGILEALYFDGNSKAINRVYEQHVLSVGDFDERIFL 322
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ-KLRGNIE 314
+IVRAE LSRD+VKHLN EE++L+SLAW S+SPLW I+ + + +P CE+ L G +E
Sbjct: 534 IIVRAENQLSRDVVKHLNQIEEKILESLAWQSDSPLWGAIQSTPEGVPSCEEVSLPGMLE 593
Query: 315 DL 316
+
Sbjct: 594 TV 595
>gi|340722763|ref|XP_003399771.1| PREDICTED: retinoblastoma-like protein 1-like isoform 2 [Bombus
terrestris]
Length = 1041
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 158/355 (44%), Positives = 217/355 (61%), Gaps = 36/355 (10%)
Query: 1 MGQLADNE--TAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVS 58
MGQ D E T +HQ+LC LN+D+T A EAW +Y+ + +YTLEG QLHW+GC+LYV+
Sbjct: 1 MGQSDDVEDSTYSRHQDLCQKLNMDATAASEAWKSYETIRQNYTLEGDQLHWIGCALYVA 60
Query: 59 CRKATVPTVNSNRT-IEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIAR 117
CRK+++PTV T +EGN V LT LL+ C + L QF K + WADM + FRSKI +
Sbjct: 61 CRKSSIPTVGKTGTNVEGNCVSLTRLLQLCNLPLIQFFTKSKSWADMANMSQDFRSKIEK 120
Query: 118 LERNFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVL 177
LE NFAVS VIF KY P+F ++FK P +D++ R + K + CT +VFEF W LF+
Sbjct: 121 LEGNFAVSMVIFKKYQPIFTDIFKDP-VDDISRPPRSRRHKAMPCTPARVFEFCWTLFIC 179
Query: 178 TKAEYLDVSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDD 237
K + D+S+DLVNS+HLL+ CDLIY+N + + +D++NP+F G+PSNF D ++ P
Sbjct: 180 IKGAFPDISDDLVNSYHLLLVCCDLIYSNALLANRKDLLNPNFPGLPSNFNDENYTPPQT 239
Query: 238 PPCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIED 297
CI+S+LC+ H+ + V E L I K N
Sbjct: 240 ANCIVSLLCERHEAIAVEAKVIKEYYLKNHINKLFN------------------------ 275
Query: 298 SGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
E+ LRG+ + S ILE FD N K +N++YE+++LSVGDFDERIFL
Sbjct: 276 --------ERVLRGDQTNFSGILEALYFDGNSKAINRVYEQHVLSVGDFDERIFL 322
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ-KLRGNIE 314
+IVRAE LSRD+VKHLN EE++L+SLAW S+SPLW I+ + + +P CE+ L G +E
Sbjct: 568 IIVRAENQLSRDVVKHLNQIEEKILESLAWQSDSPLWGAIQSTPEGVPSCEEVSLPGMLE 627
Query: 315 DL 316
+
Sbjct: 628 TV 629
>gi|350424140|ref|XP_003493700.1| PREDICTED: retinoblastoma-like protein 1-like isoform 2 [Bombus
impatiens]
Length = 1007
Score = 311 bits (796), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 158/355 (44%), Positives = 217/355 (61%), Gaps = 36/355 (10%)
Query: 1 MGQLADNE--TAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVS 58
MGQ D E T +HQ+LC LN+D+T A EAW +Y+ + +YTLEG QLHW+GC+LYV+
Sbjct: 1 MGQSDDVEDSTYSRHQDLCQKLNMDATAASEAWKSYETIRQNYTLEGDQLHWIGCALYVA 60
Query: 59 CRKATVPTVNSNRT-IEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIAR 117
CRK+++PTV T +EGN V LT LL+ C + L QF K + WADM + FRSKI +
Sbjct: 61 CRKSSIPTVGKTGTNVEGNCVSLTRLLQLCNLPLIQFFTKSKSWADMANMSQDFRSKIEK 120
Query: 118 LERNFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVL 177
LE NFAVS VIF KY P+F ++FK P +D++ R + K + CT +VFEF W LF+
Sbjct: 121 LEGNFAVSMVIFKKYQPIFTDIFKDP-VDDISRPPRSRRHKAMPCTPARVFEFCWTLFIC 179
Query: 178 TKAEYLDVSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDD 237
K + D+S+DLVNS+HLL+ CDLIY+N + + +D++NP+F G+PSNF D ++ P
Sbjct: 180 IKGAFPDISDDLVNSYHLLLVCCDLIYSNALLANRKDLLNPNFPGLPSNFNDENYIPPQT 239
Query: 238 PPCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIED 297
CI+S+LC+ H+ + V E L I K N
Sbjct: 240 ANCIVSLLCERHEAIAVEAKVIKEYYLKNHINKLFN------------------------ 275
Query: 298 SGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
E+ LRG+ + S ILE FD N K +N++YE+++LSVGDFDERIFL
Sbjct: 276 --------ERVLRGDQTNFSGILEALYFDGNSKAINRVYEQHVLSVGDFDERIFL 322
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ-KLRGNIE 314
+IVRAE LSRD+VKHLN EE++L+SLAW S+SPLW I+ + + +P CE+ L G +E
Sbjct: 534 IIVRAENQLSRDVVKHLNQIEEKILESLAWQSDSPLWSAIQSTPEGVPSCEEVSLPGMLE 593
Query: 315 DL 316
+
Sbjct: 594 TV 595
>gi|350424134|ref|XP_003493699.1| PREDICTED: retinoblastoma-like protein 1-like isoform 1 [Bombus
impatiens]
Length = 1041
Score = 311 bits (796), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 158/355 (44%), Positives = 217/355 (61%), Gaps = 36/355 (10%)
Query: 1 MGQLADNE--TAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVS 58
MGQ D E T +HQ+LC LN+D+T A EAW +Y+ + +YTLEG QLHW+GC+LYV+
Sbjct: 1 MGQSDDVEDSTYSRHQDLCQKLNMDATAASEAWKSYETIRQNYTLEGDQLHWIGCALYVA 60
Query: 59 CRKATVPTVNSNRT-IEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIAR 117
CRK+++PTV T +EGN V LT LL+ C + L QF K + WADM + FRSKI +
Sbjct: 61 CRKSSIPTVGKTGTNVEGNCVSLTRLLQLCNLPLIQFFTKSKSWADMANMSQDFRSKIEK 120
Query: 118 LERNFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVL 177
LE NFAVS VIF KY P+F ++FK P +D++ R + K + CT +VFEF W LF+
Sbjct: 121 LEGNFAVSMVIFKKYQPIFTDIFKDP-VDDISRPPRSRRHKAMPCTPARVFEFCWTLFIC 179
Query: 178 TKAEYLDVSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDD 237
K + D+S+DLVNS+HLL+ CDLIY+N + + +D++NP+F G+PSNF D ++ P
Sbjct: 180 IKGAFPDISDDLVNSYHLLLVCCDLIYSNALLANRKDLLNPNFPGLPSNFNDENYIPPQT 239
Query: 238 PPCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIED 297
CI+S+LC+ H+ + V E L I K N
Sbjct: 240 ANCIVSLLCERHEAIAVEAKVIKEYYLKNHINKLFN------------------------ 275
Query: 298 SGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
E+ LRG+ + S ILE FD N K +N++YE+++LSVGDFDERIFL
Sbjct: 276 --------ERVLRGDQTNFSGILEALYFDGNSKAINRVYEQHVLSVGDFDERIFL 322
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ-KLRGNIE 314
+IVRAE LSRD+VKHLN EE++L+SLAW S+SPLW I+ + + +P CE+ L G +E
Sbjct: 568 IIVRAENQLSRDVVKHLNQIEEKILESLAWQSDSPLWSAIQSTPEGVPSCEEVSLPGMLE 627
Query: 315 DL 316
+
Sbjct: 628 TV 629
>gi|383857279|ref|XP_003704132.1| PREDICTED: retinoblastoma-like protein 1 [Megachile rotundata]
Length = 1039
Score = 310 bits (794), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 158/355 (44%), Positives = 218/355 (61%), Gaps = 36/355 (10%)
Query: 1 MGQLADNE--TAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVS 58
MGQ D E T +HQ+LC LN+D+T A EAW +Y+ + +YTLEG QLHW+GC+LYV+
Sbjct: 1 MGQSDDVEDSTYSRHQDLCQKLNMDATAAAEAWKSYETIRQNYTLEGDQLHWIGCALYVA 60
Query: 59 CRKATVPTVN-SNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIAR 117
CRK+++PTV + +EGN V LT LL+ C + L QF K + WADM +P FRSKI +
Sbjct: 61 CRKSSIPTVGKTGPNVEGNCVSLTRLLQLCNLPLIQFFTKSKSWADMANMPQDFRSKIEK 120
Query: 118 LERNFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVL 177
LE NFAVS VIF KY P+F ++FK P+ D++ R + + + CT +VFEF W LF+
Sbjct: 121 LEGNFAVSMVIFKKYQPIFTDIFKDPE-DDISRPPRSRRHRAMPCTPGRVFEFCWTLFIC 179
Query: 178 TKAEYLDVSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDD 237
K + D+S+DLVNS+HLL+A CD IY+N + + +D++NP+F G+P NF D ++ P
Sbjct: 180 IKGAFPDISDDLVNSYHLLLACCDFIYSNALLANRKDLLNPNFPGLPPNFNDENYTPPQT 239
Query: 238 PPCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIED 297
CII++LC+ H+ + V E L I K N
Sbjct: 240 ANCIINLLCERHEAISVEAKVIKEYYLRNHINKLFN------------------------ 275
Query: 298 SGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
E+ LRG+ + S ILE NFD N K +NK+YE+++LSVGDFDERIFL
Sbjct: 276 --------ERVLRGDQSNFSGILEALNFDGNSKAINKVYEQHVLSVGDFDERIFL 322
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ-KLRGNIE 314
+IVRAE LSRD+VKHLN EE++L+SLAW S+SPLW I+ + + +P CE+ L G +E
Sbjct: 568 IIVRAEDQLSRDVVKHLNQIEEKILESLAWKSDSPLWSAIQSTPEGVPSCEEVSLPGTLE 627
Query: 315 DL 316
+
Sbjct: 628 TV 629
>gi|307182540|gb|EFN69736.1| Retinoblastoma-like protein 1 [Camponotus floridanus]
Length = 1039
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 161/355 (45%), Positives = 214/355 (60%), Gaps = 36/355 (10%)
Query: 1 MGQLADNE--TAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVS 58
MGQ D E T QHQ+LC LN+D+T A EAW +Y+ + +YTLEG QLHW+GC+LYV+
Sbjct: 1 MGQSDDVEDSTYSQHQDLCQKLNMDATAASEAWKSYETIRQNYTLEGDQLHWIGCALYVA 60
Query: 59 CRKATVPTVN-SNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIAR 117
CRK++ PTV + +EGN V LT LL+ C + L QF K + WADM +P FR+KI +
Sbjct: 61 CRKSSTPTVGRTGANVEGNCVSLTRLLQLCNLPLIQFFTKSKSWADMANMPQDFRTKIQK 120
Query: 118 LERNFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVL 177
LE NF+VS VIF KY P+F ++FK P D + R + + I CT T+VFEF W LF+
Sbjct: 121 LEANFSVSMVIFKKYQPIFTDIFKDPKED-ISRPPRSRRHRAIPCTPTRVFEFCWTLFIC 179
Query: 178 TKAEYLDVSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDD 237
K D+S+DLVNS+HLL+ CDLIY+N + S +D++NP+F G+P+NF D ++ P
Sbjct: 180 IKGAIPDISDDLVNSYHLLLVCCDLIYSNALLSNRKDLLNPNFPGLPANFNDENYIPPQT 239
Query: 238 PPCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIED 297
CIIS+LC+ H+ + V E + I K N
Sbjct: 240 ANCIISLLCERHEAIAVEAKVIKEYCMKNYINKLFN------------------------ 275
Query: 298 SGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
E+ LRG+ + S ILE NFD N K VNK YE+ +LSVGDFDERIFL
Sbjct: 276 --------ERILRGDQSNFSGILEALNFDGNSKAVNKAYEQRVLSVGDFDERIFL 322
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ-KLRGNIE 314
+IVRAE LSRD+VKHLN EE++L+SLAW S+SPLW+ IE +P CE+ L G +E
Sbjct: 566 IIVRAEDQLSRDVVKHLNQIEEKILESLAWRSDSPLWQTIESLPDGVPSCEEVSLPGTLE 625
Query: 315 DL 316
+
Sbjct: 626 TV 627
>gi|332017056|gb|EGI57855.1| Retinoblastoma-like protein 1 [Acromyrmex echinatior]
Length = 1042
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 154/359 (42%), Positives = 215/359 (59%), Gaps = 36/359 (10%)
Query: 1 MGQLADNETA--HQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVS 58
MGQ D E + +HQ+LC LN+D+ A EAW +Y+ + +YTLEG QLHW+GC++YV+
Sbjct: 1 MGQSDDIEDSMYGRHQDLCQKLNMDAAAASEAWKSYETIRQNYTLEGDQLHWIGCAVYVA 60
Query: 59 CRKATVPTVNSNRT-IEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIAR 117
CRK ++PTV T +EGN V LT LL+ C + L QF K + WADM +P FR++I +
Sbjct: 61 CRKFSIPTVGRPGTNVEGNCVSLTRLLQLCNLPLIQFFTKSKSWADMANMPQDFRARIEK 120
Query: 118 LERNFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVL 177
LE NF+VS VIF KY P+F ++FK P D H R + K + CT T+VFEF W LF+
Sbjct: 121 LEANFSVSMVIFKKYQPIFADIFKDPREDTSKPH-RSRRHKAMPCTPTRVFEFCWTLFIC 179
Query: 178 TKAEYLDVSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDD 237
K D+S+DLVNS+HLL+ CDLIY+N + S +D++NP+F G+P+NF D ++ P
Sbjct: 180 IKGAIHDISDDLVNSYHLLLVCCDLIYSNALLSNRKDLLNPNFPGLPTNFNDDNYPPPQA 239
Query: 238 PPCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIED 297
CI+++LC+ HD + E + I K N
Sbjct: 240 ANCIVNLLCERHDAIAVEAKAIKEYCMKNYINKLFN------------------------ 275
Query: 298 SGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFLPKFQ 356
E+ LRG+ + S +LE NFD N K +NK YE+ +LSVGDFDERIFL +++
Sbjct: 276 --------EKILRGDQSNFSGMLESLNFDGNNKAINKSYEQRMLSVGDFDERIFLAEWR 326
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ-KLRGNIE 314
+IVRAE LSRD+VKHLN EE++L+SLAW S+SPLW+ IE +P CE+ L G +E
Sbjct: 572 IIVRAEDQLSRDVVKHLNHIEEKILESLAWQSDSPLWQTIESLLDGVPSCEEVSLPGTLE 631
>gi|345490209|ref|XP_003426328.1| PREDICTED: retinoblastoma-like protein 1-like isoform 2 [Nasonia
vitripennis]
Length = 1030
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 150/359 (41%), Positives = 218/359 (60%), Gaps = 36/359 (10%)
Query: 1 MGQLADNETAH--QHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVS 58
MGQ D E A +HQ+LC LN+D++ A EAW +Y+ + HYTLEG QLHW+GC+LY +
Sbjct: 1 MGQSDDIEDATFMKHQDLCQKLNMDASAASEAWKSYENIRQHYTLEGDQLHWIGCALYAA 60
Query: 59 CRKATVPTVN-SNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIAR 117
CRKAT PTV + I+GN V T LL+ C + L +F K + WADM +P F ++I
Sbjct: 61 CRKATTPTVGKTGANIQGNCVSFTRLLRLCNLPLIEFFTKSKAWADMCNMPQDFGARIDT 120
Query: 118 LERNFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVL 177
L+RNF+VS VIF KY P+FK++FK P D+L +R + K + CT +++FEF W LF+
Sbjct: 121 LQRNFSVSSVIFQKYQPIFKDIFKNP-ADDLGKPLRSRRHKAVPCTPSRLFEFCWSLFIC 179
Query: 178 TKAEYLDVSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDD 237
K++ +S+DLVNS+HLL+ CDL+Y+N + + ++++NPDF G+P NF D ++ P +
Sbjct: 180 IKSKISAISDDLVNSYHLLLVCCDLMYSNALLANGKELLNPDFPGLPENFSDENYTPPET 239
Query: 238 PPCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIED 297
CI+S+LC+ ++ + E SL + K N
Sbjct: 240 ANCIVSLLCERYNAIAVEANTIKEYSLKPYLRKLFN------------------------ 275
Query: 298 SGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFLPKFQ 356
E+ LRG+ + S ILE NFD N K +NK YE+++LSVGD DERIFL +++
Sbjct: 276 --------ERVLRGDPSNYSGILEALNFDGNNKAINKAYEQHVLSVGDLDERIFLAEWR 326
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 256 VIVR-AEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCE 306
VIV+ A L+RD+VKHLN EE +L+SLAW S SPLW+ ++D + +P E
Sbjct: 565 VIVKVAVDQLTRDMVKHLNRIEEMILESLAWKSGSPLWRALKDCDEGVPSYE 616
>gi|417405972|gb|JAA49670.1| Putative rb retinoblastoma tumor suppressor-related protein
[Desmodus rotundus]
Length = 1139
Score = 297 bits (760), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 154/347 (44%), Positives = 213/347 (61%), Gaps = 38/347 (10%)
Query: 8 ETAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTV 67
+T + +ELC LN+D T EAW++Y+ MS YTLEG+ LHWL C+LYV+CRK +VPTV
Sbjct: 44 QTQQRFEELCCRLNMDETARAEAWDSYRSMSQSYTLEGNDLHWLACALYVACRK-SVPTV 102
Query: 68 NSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKV 127
S T+EGN V LT LL+ + SL +F +K +KW +M LP FR + RLERNF VS V
Sbjct: 103 -SKGTVEGNYVSLTRLLRCSEQSLIEFFSKMKKWEEMANLPQHFRERTERLERNFTVSAV 161
Query: 128 IFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSN 187
+F KY P+F+E+FK P +E R K++ CT ++VF F W+LF+ K + +S+
Sbjct: 162 VFKKYEPLFQEIFKYPQ-EEQPRQPRGRKQRRQPCTVSEVFHFCWVLFIYAKGNFPMISD 220
Query: 188 DLVNSFHLLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILC 246
DLVNS+HLL+ DL+Y N +Q S ++++NP+F+G+P +FL F P DPPC+I LC
Sbjct: 221 DLVNSYHLLLCALDLVYGNAVQCSNRKELLNPNFKGLPEDFLAKDFKPSSDPPCVIEKLC 280
Query: 247 KHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCE 306
HDG L ++ I +H W P + + CE
Sbjct: 281 SLHDGLVL---------EAKGIKEHF------------W---KPYIRKL---------CE 307
Query: 307 QK-LRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+K L+G E+L+ LEP NF NFK ++K YEEY+LSVG+ DERIFL
Sbjct: 308 KKLLKGKEENLTGFLEPANFGENFKAISKAYEEYVLSVGNLDERIFL 354
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 36/52 (69%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW S SPLW I D+ +P CE+
Sbjct: 570 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKSESPLWDRIRDNDNRVPTCEE 621
>gi|345490211|ref|XP_001604637.2| PREDICTED: retinoblastoma-like protein 1-like isoform 1 [Nasonia
vitripennis]
Length = 1002
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 150/355 (42%), Positives = 215/355 (60%), Gaps = 36/355 (10%)
Query: 1 MGQLADNETAH--QHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVS 58
MGQ D E A +HQ+LC LN+D++ A EAW +Y+ + HYTLEG QLHW+GC+LY +
Sbjct: 1 MGQSDDIEDATFMKHQDLCQKLNMDASAASEAWKSYENIRQHYTLEGDQLHWIGCALYAA 60
Query: 59 CRKATVPTVN-SNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIAR 117
CRKAT PTV + I+GN V T LL+ C + L +F K + WADM +P F ++I
Sbjct: 61 CRKATTPTVGKTGANIQGNCVSFTRLLRLCNLPLIEFFTKSKAWADMCNMPQDFGARIDT 120
Query: 118 LERNFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVL 177
L+RNF+VS VIF KY P+FK++FK P D+L +R + K + CT +++FEF W LF+
Sbjct: 121 LQRNFSVSSVIFQKYQPIFKDIFKNP-ADDLGKPLRSRRHKAVPCTPSRLFEFCWSLFIC 179
Query: 178 TKAEYLDVSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDD 237
K++ +S+DLVNS+HLL+ CDL+Y+N + + ++++NPDF G+P NF D ++ P +
Sbjct: 180 IKSKISAISDDLVNSYHLLLVCCDLMYSNALLANGKELLNPDFPGLPENFSDENYTPPET 239
Query: 238 PPCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIED 297
CI+S+LC+ ++ + E SL + K N
Sbjct: 240 ANCIVSLLCERYNAIAVEANTIKEYSLKPYLRKLFN------------------------ 275
Query: 298 SGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
E+ LRG+ + S ILE NFD N K +NK YE+++LSVGD DERIFL
Sbjct: 276 --------ERVLRGDPSNYSGILEALNFDGNNKAINKAYEQHVLSVGDLDERIFL 322
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 256 VIVR-AEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCE 306
VIV+ A L+RD+VKHLN EE +L+SLAW S SPLW+ ++D + +P E
Sbjct: 537 VIVKVAVDQLTRDMVKHLNRIEEMILESLAWKSGSPLWRALKDCDEGVPSYE 588
>gi|322789792|gb|EFZ14956.1| hypothetical protein SINV_13137 [Solenopsis invicta]
Length = 965
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 146/342 (42%), Positives = 203/342 (59%), Gaps = 34/342 (9%)
Query: 12 QHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNR 71
+HQ+LC LN+D+ A EAW +Y+ + +YTLEG QLHW+GC++YV+CRK ++PTV
Sbjct: 7 RHQDLCQKLNMDAVAASEAWKSYETIRQNYTLEGDQLHWIGCAVYVACRKFSIPTVGRPG 66
Query: 72 T-IEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFT 130
T +EGN V LT LL+ C + L QF K + WADM +P FR++I +LE NF+VS VIF
Sbjct: 67 TNVEGNCVSLTRLLQLCNLPLIQFFTKSKSWADMANMPQDFRARIEKLEANFSVSMVIFK 126
Query: 131 KYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLV 190
KY P+F ++FK P D R + K CT ++VFEF W LF+ K D+S+DLV
Sbjct: 127 KYQPIFSDIFKDPREDTS-KPSRSRRHKATPCTPSRVFEFCWTLFICIKGAIHDISDDLV 185
Query: 191 NSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHD 250
NS+HLL+ CDLIY N + + +D++NP+F G+P+NF D ++ P CI+++LC+ HD
Sbjct: 186 NSYHLLLVCCDLIYNNALLANRKDLLNPNFPGLPANFNDDNYTPPQTANCIVNLLCERHD 245
Query: 251 GCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLR 310
+ E + I K N E+ LR
Sbjct: 246 AIAVEAKAIKEYCVRNYINKLFN--------------------------------EKTLR 273
Query: 311 GNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
G+ + S +LE NFD N K +NK YE+ +LSVGDFDERIFL
Sbjct: 274 GDQSNFSGMLEAMNFDSNNKAINKSYEQRMLSVGDFDERIFL 315
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 49/70 (70%), Gaps = 3/70 (4%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ-KLRGNIE 314
+I+RAE LSRD+VKHLN EE++L+SLAW S+SPLW+ IE +P CE+ L G +E
Sbjct: 529 IIIRAEDQLSRDVVKHLNHIEEKILESLAWQSDSPLWQTIESLPDGVPSCEEVALPGTLE 588
Query: 315 --DLSAILEP 322
DL+ +P
Sbjct: 589 TADLNTSGQP 598
>gi|301752866|ref|XP_002912283.1| PREDICTED: LOW QUALITY PROTEIN: retinoblastoma-like protein 2-like
[Ailuropoda melanoleuca]
Length = 1137
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 150/346 (43%), Positives = 208/346 (60%), Gaps = 36/346 (10%)
Query: 8 ETAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTV 67
+T + ELC LN+D EAW++Y+ MS YTLEG+ LHWL C+LYV+CRK +VPTV
Sbjct: 42 QTQQRFDELCSRLNMDEAARAEAWDSYRNMSESYTLEGNDLHWLACALYVACRK-SVPTV 100
Query: 68 NSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKV 127
S T+EGN V LT +L+ + SL +F NK +KW DM LP FR + RLERNF VS V
Sbjct: 101 -SKGTVEGNYVSLTRILRCSEQSLIEFFNKMKKWEDMANLPPHFRERTERLERNFTVSAV 159
Query: 128 IFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSN 187
IF KY P+F+++FK P +E R K++ CT ++VF F W+LF+ K + +S+
Sbjct: 160 IFKKYEPIFQDIFKYPQ-EEQPRQQRGRKQRRQPCTVSEVFHFCWVLFIYAKGNFPMISD 218
Query: 188 DLVNSFHLLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILC 246
DLVNS+HLL+ DL+Y N +Q S +++VNP+F+G+ +F F P DPPC+I LC
Sbjct: 219 DLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDFHAKDFKPSSDPPCVIEKLC 278
Query: 247 KHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCE 306
HDG L ++ I +H W P + + + +
Sbjct: 279 SLHDGLVL---------EAKGIKEHF------------W---KPYIRKLYE--------K 306
Query: 307 QKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+ L+G E+L+ LEP NF +FK +NK YEEY+LSVG+ DERIFL
Sbjct: 307 KLLKGKEENLTGFLEPGNFGESFKAINKAYEEYVLSVGNLDERIFL 352
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 35/52 (67%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW SPLW I D+ +P CE+
Sbjct: 567 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWDRIRDNENRVPTCEE 618
>gi|126296327|ref|XP_001372085.1| PREDICTED: retinoblastoma-like protein 2 [Monodelphis domestica]
Length = 1145
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 148/353 (41%), Positives = 208/353 (58%), Gaps = 36/353 (10%)
Query: 1 MGQLADNETAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCR 60
+GQ +T + ELC LN+D EAW +Y+ MS YTLEG+ LHWL C+LYV+CR
Sbjct: 44 VGQTPAPQTRQRFDELCGRLNMDEEARAEAWESYRNMSQSYTLEGNDLHWLACALYVACR 103
Query: 61 KATVPTVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLER 120
K+ VPTV S T+EGN V LT +L+ + SL +F NK +KW DM LP FR + RLER
Sbjct: 104 KS-VPTV-SKGTVEGNYVSLTRILRCSEQSLIEFFNKMKKWEDMANLPSRFRERTERLER 161
Query: 121 NFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKA 180
NF VS VIF KY P+F+++F+ +E R K + CT ++VF+F W+LFV K
Sbjct: 162 NFTVSAVIFKKYEPIFQDIFR-YSQEEPPRQQRGRKYRRQPCTVSEVFQFCWVLFVYAKG 220
Query: 181 EYLDVSNDLVNSFHLLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPP 239
+ +S+DLVNS+HLL+ DL+Y N +Q S ++++NP+F+G+P +F P DPP
Sbjct: 221 NFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELLNPNFKGLPEDFHSKDSKPSSDPP 280
Query: 240 CIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSG 299
C+I LC HDG L ++ I +H W P + + +
Sbjct: 281 CVIEPLCALHDGLVL---------EAKGIKEHF------------W---KPYIRKLFE-- 314
Query: 300 QEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
++ L+G E+L+ L+P NF + K +NK YEEY+LSVG+ DERIFL
Sbjct: 315 ------KKLLKGREENLTGFLDPGNFGDSIKAINKAYEEYVLSVGNLDERIFL 361
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 36/52 (69%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD +AW SPLW I D+ ++P CE+
Sbjct: 577 VFIRAEDGLCREVVKHLNHIEEQILDHMAWKPESPLWDRIRDNENKVPTCEE 628
>gi|440910036|gb|ELR59870.1| Retinoblastoma-like protein 2 [Bos grunniens mutus]
Length = 1137
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 149/346 (43%), Positives = 206/346 (59%), Gaps = 36/346 (10%)
Query: 8 ETAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTV 67
+T + ELC LN+D EAW +Y+ MS YTLEG+ LHWL C+LYV+CRK +VPTV
Sbjct: 44 QTQQRFDELCSRLNMDEAARAEAWESYRSMSESYTLEGNDLHWLACALYVACRK-SVPTV 102
Query: 68 NSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKV 127
S T+EGN V LT +L+ + SL +F NK +KW DM LP FR + RLERNF VS V
Sbjct: 103 -SKGTVEGNYVSLTRILRCSEQSLIEFFNKMKKWEDMANLPPHFRERTERLERNFTVSAV 161
Query: 128 IFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSN 187
IF KY P+F+++FK P +E R K++ CT ++VF F W+LF+ K + +S+
Sbjct: 162 IFKKYEPIFQDIFKYPQ-EEQPRQQRGRKQRRQPCTVSEVFHFCWVLFIYAKGNFPMISD 220
Query: 188 DLVNSFHLLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILC 246
DLVNS+HLL+ DL+Y N +Q S +++VNP+F+G+ +F P DPPC+I LC
Sbjct: 221 DLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDFHAKDSKPSSDPPCVIEKLC 280
Query: 247 KHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCE 306
HDG L ++ I +H W P + + + +
Sbjct: 281 SLHDGLVL---------EAKGIKEHF------------W---KPYIRKLYE--------K 308
Query: 307 QKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+ L+G E+L+ LEP NF +FK +NK YEEY+LSVG+ DERIFL
Sbjct: 309 KLLKGKEENLTGFLEPGNFGESFKAINKAYEEYVLSVGNLDERIFL 354
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 35/52 (67%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW SPLW I D+ +P CE+
Sbjct: 567 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWDRIRDNENRVPTCEE 618
>gi|148225699|ref|NP_001091542.1| retinoblastoma-like protein 2 [Bos taurus]
gi|146186627|gb|AAI40609.1| RBL2 protein [Bos taurus]
gi|296477992|tpg|DAA20107.1| TPA: retinoblastoma-like 2 (p130) [Bos taurus]
Length = 1140
Score = 277 bits (709), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 149/346 (43%), Positives = 206/346 (59%), Gaps = 36/346 (10%)
Query: 8 ETAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTV 67
+T + ELC LN+D EAW +Y+ MS YTLEG+ LHWL C+LYV+CRK +VPTV
Sbjct: 44 QTQQRFDELCSRLNMDEAARAEAWESYRSMSESYTLEGNDLHWLACALYVACRK-SVPTV 102
Query: 68 NSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKV 127
S T+EGN V LT +L+ + SL +F NK +KW DM LP FR + RLERNF VS V
Sbjct: 103 -SKGTVEGNYVSLTRILRCSEQSLIEFFNKMKKWEDMANLPPHFRERTERLERNFTVSAV 161
Query: 128 IFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSN 187
IF KY P+F+++FK P +E R K++ CT ++VF F W+LF+ K + +S+
Sbjct: 162 IFKKYEPIFQDIFKYPQ-EEQPRQQRGRKQRRQPCTVSEVFHFCWVLFIYAKGNFPMISD 220
Query: 188 DLVNSFHLLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILC 246
DLVNS+HLL+ DL+Y N +Q S +++VNP+F+G+ +F P DPPC+I LC
Sbjct: 221 DLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDFHAKDSKPSSDPPCVIEKLC 280
Query: 247 KHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCE 306
HDG L ++ I +H W P + + + +
Sbjct: 281 SLHDGLVL---------EAKGIKEHF------------W---KPYIRKLYE--------K 308
Query: 307 QKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+ L+G E+L+ LEP NF +FK +NK YEEY+LSVG+ DERIFL
Sbjct: 309 KLLKGKEENLTGFLEPGNFGESFKAINKAYEEYVLSVGNLDERIFL 354
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 35/52 (67%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW SPLW I D+ +P CE+
Sbjct: 570 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWDRIRDNENRVPTCEE 621
>gi|73949852|ref|XP_535303.2| PREDICTED: retinoblastoma-like protein 2 isoform 1 [Canis lupus
familiaris]
Length = 1139
Score = 277 bits (708), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 149/346 (43%), Positives = 207/346 (59%), Gaps = 36/346 (10%)
Query: 8 ETAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTV 67
+T + ELC LN+D EAW++Y+ MS YTLEG+ LHWL C+LYV+CRK +VPTV
Sbjct: 44 QTQQRFDELCSRLNMDEAARAEAWDSYRNMSESYTLEGNDLHWLACALYVACRK-SVPTV 102
Query: 68 NSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKV 127
S T+EGN V LT +L+ + SL +F NK +KW DM LP FR + RLERNF VS V
Sbjct: 103 -SKGTVEGNYVSLTRILRCSEQSLIEFFNKMKKWEDMANLPPHFRERTERLERNFTVSAV 161
Query: 128 IFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSN 187
IF KY P+F+++FK P +E R K++ CT ++VF F W+LF+ K + +S+
Sbjct: 162 IFKKYEPIFQDIFKYPQ-EEQPRQQRGRKQRRQPCTVSEVFHFCWVLFIYAKGNFPMISD 220
Query: 188 DLVNSFHLLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILC 246
DLVNS+HLL+ DL+Y N +Q S +++VNP+F+G+ +F P DPPC+I LC
Sbjct: 221 DLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDFHAKDSKPSSDPPCVIEKLC 280
Query: 247 KHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCE 306
HDG L ++ I +H W P + + + +
Sbjct: 281 SLHDGLVL---------EAKGIKEHF------------W---KPYIRKLYE--------K 308
Query: 307 QKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+ L+G E+L+ LEP NF +FK +NK YEEY+LSVG+ DERIFL
Sbjct: 309 KLLKGKEENLTGFLEPGNFGESFKAINKAYEEYVLSVGNLDERIFL 354
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 35/52 (67%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW SPLW I D+ +P CE+
Sbjct: 569 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWDRIRDNENRVPTCEE 620
>gi|397502866|ref|XP_003822060.1| PREDICTED: retinoblastoma-like protein 2 [Pan paniscus]
Length = 1139
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 149/339 (43%), Positives = 204/339 (60%), Gaps = 36/339 (10%)
Query: 15 ELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTIE 74
ELC LN+D EAW++Y+ MS YTLEG+ LHWL C+LYV+CRK +VPTV S T+E
Sbjct: 51 ELCSRLNMDEAARAEAWDSYRSMSESYTLEGNDLHWLACALYVACRK-SVPTV-SKGTVE 108
Query: 75 GNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLP 134
GN V LT +LK + SL +F NK +KW DM LP FR + RLERNF VS VIF KY P
Sbjct: 109 GNYVSLTRILKCSEQSLIEFFNKMKKWEDMANLPPHFRERTERLERNFTVSAVIFKKYEP 168
Query: 135 MFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFH 194
+F+++FK P +E R K++ CT +++F F W+LF+ K + +S+DLVNS+H
Sbjct: 169 IFQDIFKYPQ-EEQPRQQRGRKQRRQPCTVSEIFHFCWVLFIYAKGNFPMISDDLVNSYH 227
Query: 195 LLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGCK 253
LL+ DL+Y N +Q S +++VNP+F+G+ +F P DPPCII LC HDG
Sbjct: 228 LLLCALDLVYGNALQCSNRKELVNPNFKGLSEDFHAKDSKPSSDPPCIIEKLCSLHDGLV 287
Query: 254 LCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNI 313
L ++ I +H W P + + + ++ L+G
Sbjct: 288 L---------EAKGIKEHF------------W---KPYIRKLYE--------KKLLKGKE 315
Query: 314 EDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
E+L+ LEP NF +FK +NK YEEY+LSVG+ DERIFL
Sbjct: 316 ENLTGFLEPGNFGESFKAINKAYEEYVLSVGNLDERIFL 354
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW SPLW+ I D+ +P CE+
Sbjct: 570 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWEKIRDNENRVPTCEE 621
>gi|410227572|gb|JAA11005.1| retinoblastoma-like 2 (p130) [Pan troglodytes]
gi|410267036|gb|JAA21484.1| retinoblastoma-like 2 (p130) [Pan troglodytes]
gi|410298828|gb|JAA28014.1| retinoblastoma-like 2 (p130) [Pan troglodytes]
gi|410353057|gb|JAA43132.1| retinoblastoma-like 2 (p130) [Pan troglodytes]
Length = 1139
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 149/339 (43%), Positives = 204/339 (60%), Gaps = 36/339 (10%)
Query: 15 ELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTIE 74
ELC LN+D EAW++Y+ MS YTLEG+ LHWL C+LYV+CRK +VPTV S T+E
Sbjct: 51 ELCSRLNMDEAARAEAWDSYRSMSESYTLEGNDLHWLACALYVACRK-SVPTV-SKGTVE 108
Query: 75 GNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLP 134
GN V LT +LK + SL +F NK +KW DM LP FR + RLERNF VS VIF KY P
Sbjct: 109 GNYVSLTRILKCSEQSLIEFFNKMKKWEDMANLPPHFRERTERLERNFTVSAVIFKKYEP 168
Query: 135 MFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFH 194
+F+++FK P +E R K++ CT +++F F W+LF+ K + +S+DLVNS+H
Sbjct: 169 IFQDIFKYPQ-EEQPRQQRGRKQRRQPCTVSEIFHFCWVLFIYAKGNFPMISDDLVNSYH 227
Query: 195 LLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGCK 253
LL+ DL+Y N +Q S +++VNP+F+G+ +F P DPPCII LC HDG
Sbjct: 228 LLLCALDLVYGNALQCSNRKELVNPNFKGLSEDFHAKDSKPSSDPPCIIEKLCSLHDGLV 287
Query: 254 LCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNI 313
L ++ I +H W P + + + ++ L+G
Sbjct: 288 L---------EAKGIKEHF------------W---KPYIRKLYE--------KKLLKGKE 315
Query: 314 EDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
E+L+ LEP NF +FK +NK YEEY+LSVG+ DERIFL
Sbjct: 316 ENLTGFLEPGNFGESFKAINKAYEEYVLSVGNLDERIFL 354
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW SPLW+ I D+ +P CE+
Sbjct: 570 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWEKIRDNENRVPTCEE 621
>gi|296231081|ref|XP_002760993.1| PREDICTED: retinoblastoma-like protein 2 [Callithrix jacchus]
Length = 1140
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 149/339 (43%), Positives = 204/339 (60%), Gaps = 36/339 (10%)
Query: 15 ELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTIE 74
ELC LN+D EAW++Y+ MS YTLEG+ LHWL C+LYV+CRK +VPTV S T+E
Sbjct: 52 ELCSRLNMDEAARAEAWDSYRSMSESYTLEGNDLHWLACALYVACRK-SVPTV-SKGTVE 109
Query: 75 GNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLP 134
GN V LT +LK + SL +F NK +KW DM LP FR + RLERNF VS VIF KY P
Sbjct: 110 GNYVSLTRILKCSEQSLIEFFNKMKKWEDMANLPPHFRERTERLERNFTVSAVIFKKYEP 169
Query: 135 MFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFH 194
+F+++FK P +E R K++ CT +++F F W+LF+ K + +S+DLVNS+H
Sbjct: 170 IFQDIFKYPQ-EEQPRQQRGRKQRRQPCTVSEIFHFCWVLFIYAKGNFPMISDDLVNSYH 228
Query: 195 LLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGCK 253
LL+ DL+Y N +Q S +++VNP+F+G+ +F P DPPCII LC HDG
Sbjct: 229 LLLCALDLVYGNALQCSNRKELVNPNFKGLSEDFHAKDSKPSSDPPCIIEKLCSLHDGLV 288
Query: 254 LCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNI 313
L ++ I +H W P + + + ++ L+G
Sbjct: 289 L---------EAKGIKEHF------------W---KPYIRKLYE--------KKLLKGKE 316
Query: 314 EDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
E+L+ LEP NF +FK +NK YEEY+LSVG+ DERIFL
Sbjct: 317 ENLTGFLEPGNFGESFKAINKAYEEYVLSVGNLDERIFL 355
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW SPLW+ I D+ +P CE+
Sbjct: 571 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWEKIRDNENRVPTCEE 622
>gi|114662486|ref|XP_523371.2| PREDICTED: retinoblastoma-like protein 2 isoform 7 [Pan
troglodytes]
Length = 1139
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 149/339 (43%), Positives = 204/339 (60%), Gaps = 36/339 (10%)
Query: 15 ELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTIE 74
ELC LN+D EAW++Y+ MS YTLEG+ LHWL C+LYV+CRK +VPTV S T+E
Sbjct: 51 ELCSRLNMDEAARAEAWDSYRSMSESYTLEGNDLHWLACALYVACRK-SVPTV-SKGTVE 108
Query: 75 GNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLP 134
GN V LT +LK + SL +F NK +KW DM LP FR + RLERNF VS VIF KY P
Sbjct: 109 GNYVSLTRILKCSEQSLIEFFNKMKKWEDMANLPPHFRERTERLERNFTVSAVIFKKYEP 168
Query: 135 MFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFH 194
+F+++FK P +E R K++ CT +++F F W+LF+ K + +S+DLVNS+H
Sbjct: 169 IFQDIFKYPQ-EEQPRQQRGRKQRRQPCTVSEIFHFCWVLFIYAKGNFPMISDDLVNSYH 227
Query: 195 LLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGCK 253
LL+ DL+Y N +Q S +++VNP+F+G+ +F P DPPCII LC HDG
Sbjct: 228 LLLCALDLVYGNALQCSNRKELVNPNFKGLSEDFHAKDSKPSSDPPCIIEKLCSLHDGLV 287
Query: 254 LCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNI 313
L ++ I +H W P + + + ++ L+G
Sbjct: 288 L---------EAKGIKEHF------------W---KPYIRKLYE--------KKLLKGKE 315
Query: 314 EDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
E+L+ LEP NF +FK +NK YEEY+LSVG+ DERIFL
Sbjct: 316 ENLTGFLEPGNFGESFKAINKAYEEYVLSVGNLDERIFL 354
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW SPLW+ I D+ +P CE+
Sbjct: 570 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWEKIRDNENRVPTCEE 621
>gi|426382185|ref|XP_004057695.1| PREDICTED: retinoblastoma-like protein 2 [Gorilla gorilla gorilla]
Length = 1139
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 149/339 (43%), Positives = 204/339 (60%), Gaps = 36/339 (10%)
Query: 15 ELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTIE 74
ELC LN+D EAW++Y+ MS YTLEG+ LHWL C+LYV+CRK +VPTV S T+E
Sbjct: 51 ELCSRLNMDEAARAEAWDSYRSMSESYTLEGNDLHWLACALYVACRK-SVPTV-SKGTVE 108
Query: 75 GNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLP 134
GN V LT +LK + SL +F NK +KW DM LP FR + RLERNF VS VIF KY P
Sbjct: 109 GNYVSLTRILKCSEQSLIEFFNKMKKWEDMANLPPHFRERTERLERNFTVSAVIFKKYEP 168
Query: 135 MFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFH 194
+F+++FK P +E R K++ CT +++F F W+LF+ K + +S+DLVNS+H
Sbjct: 169 IFQDIFKYPQ-EEQPRQQRGRKQRRQPCTVSEIFHFCWVLFIYAKGNFPMISDDLVNSYH 227
Query: 195 LLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGCK 253
LL+ DL+Y N +Q S +++VNP+F+G+ +F P DPPCII LC HDG
Sbjct: 228 LLLCALDLVYGNALQCSNRKELVNPNFKGLSEDFHAKDSKPSSDPPCIIEKLCSLHDGLV 287
Query: 254 LCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNI 313
L ++ I +H W P + + + ++ L+G
Sbjct: 288 L---------EAKGIKEHF------------W---KPYIRKLYE--------KKLLKGKE 315
Query: 314 EDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
E+L+ LEP NF +FK +NK YEEY+LSVG+ DERIFL
Sbjct: 316 ENLTGFLEPGNFGESFKAINKAYEEYVLSVGNLDERIFL 354
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW SPLW+ I D+ +P CE+
Sbjct: 570 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWEKIRDNENRVPTCEE 621
>gi|172072597|ref|NP_005602.3| retinoblastoma-like protein 2 [Homo sapiens]
gi|116242746|sp|Q08999.3|RBL2_HUMAN RecName: Full=Retinoblastoma-like protein 2; AltName: Full=130 kDa
retinoblastoma-associated protein; Short=p130; AltName:
Full=Retinoblastoma-related protein 2; Short=RBR-2;
AltName: Full=pRb2
gi|453132|gb|AAB29227.1| p130 [Homo sapiens]
gi|119603208|gb|EAW82802.1| retinoblastoma-like 2 (p130), isoform CRA_b [Homo sapiens]
gi|739073|prf||2002264A Rb-related p130 protein
Length = 1139
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 149/339 (43%), Positives = 204/339 (60%), Gaps = 36/339 (10%)
Query: 15 ELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTIE 74
ELC LN+D EAW++Y+ MS YTLEG+ LHWL C+LYV+CRK +VPTV S T+E
Sbjct: 51 ELCSRLNMDEAARAEAWDSYRSMSESYTLEGNDLHWLACALYVACRK-SVPTV-SKGTVE 108
Query: 75 GNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLP 134
GN V LT +LK + SL +F NK +KW DM LP FR + RLERNF VS VIF KY P
Sbjct: 109 GNYVSLTRILKCSEQSLIEFFNKMKKWEDMANLPPHFRERTERLERNFTVSAVIFKKYEP 168
Query: 135 MFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFH 194
+F+++FK P +E R K++ CT +++F F W+LF+ K + +S+DLVNS+H
Sbjct: 169 IFQDIFKYPQ-EEQPRQQRGRKQRRQPCTVSEIFHFCWVLFIYAKGNFPMISDDLVNSYH 227
Query: 195 LLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGCK 253
LL+ DL+Y N +Q S +++VNP+F+G+ +F P DPPCII LC HDG
Sbjct: 228 LLLCALDLVYGNALQCSNRKELVNPNFKGLSEDFHAKDSKPSSDPPCIIEKLCSLHDGLV 287
Query: 254 LCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNI 313
L ++ I +H W P + + + ++ L+G
Sbjct: 288 L---------EAKGIKEHF------------W---KPYIRKLYE--------KKLLKGKE 315
Query: 314 EDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
E+L+ LEP NF +FK +NK YEEY+LSVG+ DERIFL
Sbjct: 316 ENLTGFLEPGNFGESFKAINKAYEEYVLSVGNLDERIFL 354
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW SPLW+ I D+ +P CE+
Sbjct: 570 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWEKIRDNENRVPTCEE 621
>gi|21759787|gb|AAH34490.1| Retinoblastoma-like 2 (p130) [Homo sapiens]
Length = 1139
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 149/339 (43%), Positives = 204/339 (60%), Gaps = 36/339 (10%)
Query: 15 ELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTIE 74
ELC LN+D EAW++Y+ MS YTLEG+ LHWL C+LYV+CRK +VPTV S T+E
Sbjct: 51 ELCSRLNMDEAARAEAWDSYRSMSESYTLEGNDLHWLACALYVACRK-SVPTV-SKGTVE 108
Query: 75 GNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLP 134
GN V LT +LK + SL +F NK +KW DM LP FR + RLERNF VS VIF KY P
Sbjct: 109 GNYVSLTRILKCSEQSLIEFFNKMKKWEDMANLPPHFRERTERLERNFTVSAVIFKKYEP 168
Query: 135 MFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFH 194
+F+++FK P +E R K++ CT +++F F W+LF+ K + +S+DLVNS+H
Sbjct: 169 IFQDIFKYPQ-EEQPRQQRGRKQRRQPCTVSEIFHFCWVLFIYAKGNFPMISDDLVNSYH 227
Query: 195 LLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGCK 253
LL+ DL+Y N +Q S +++VNP+F+G+ +F P DPPCII LC HDG
Sbjct: 228 LLLCALDLVYGNALQCSNRKELVNPNFKGLSEDFHAKDSKPSSDPPCIIEKLCSLHDGLV 287
Query: 254 LCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNI 313
L ++ I +H W P + + + ++ L+G
Sbjct: 288 L---------EAKGIKEHF------------W---KPYIRKLYE--------KKLLKGKE 315
Query: 314 EDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
E+L+ LEP NF +FK +NK YEEY+LSVG+ DERIFL
Sbjct: 316 ENLTGFLEPGNFGESFKAINKAYEEYVLSVGNLDERIFL 354
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW SPLW+ I D+ +P CE+
Sbjct: 570 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWEKIRDNENRVPTCEE 621
>gi|60654389|gb|AAX29885.1| retinoblastoma-like 2 [synthetic construct]
Length = 1140
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 149/339 (43%), Positives = 204/339 (60%), Gaps = 36/339 (10%)
Query: 15 ELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTIE 74
ELC LN+D EAW++Y+ MS YTLEG+ LHWL C+LYV+CRK +VPTV S T+E
Sbjct: 51 ELCSRLNMDEAARAEAWDSYRSMSESYTLEGNDLHWLACALYVACRK-SVPTV-SKGTVE 108
Query: 75 GNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLP 134
GN V LT +LK + SL +F NK +KW DM LP FR + RLERNF VS VIF KY P
Sbjct: 109 GNYVSLTRILKCSEQSLIEFFNKMKKWEDMANLPPHFRERTERLERNFTVSAVIFKKYEP 168
Query: 135 MFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFH 194
+F+++FK P +E R K++ CT +++F F W+LF+ K + +S+DLVNS+H
Sbjct: 169 IFQDIFKYPQ-EEQPRQQRGRKQRRQPCTVSEIFHFCWVLFIYAKGNFPMISDDLVNSYH 227
Query: 195 LLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGCK 253
LL+ DL+Y N +Q S +++VNP+F+G+ +F P DPPCII LC HDG
Sbjct: 228 LLLCALDLVYGNALQCSNRKELVNPNFKGLSEDFHAKDSKPSSDPPCIIEKLCSLHDGLV 287
Query: 254 LCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNI 313
L ++ I +H W P + + + ++ L+G
Sbjct: 288 L---------EAKGIKEHF------------W---KPYIRKLYE--------KKLLKGKE 315
Query: 314 EDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
E+L+ LEP NF +FK +NK YEEY+LSVG+ DERIFL
Sbjct: 316 ENLTGFLEPGNFGESFKAINKAYEEYVLSVGNLDERIFL 354
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW SPLW+ I D+ +P CE+
Sbjct: 570 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWEKIRDNENRVPTCEE 621
>gi|405964992|gb|EKC30423.1| Retinoblastoma-like protein 1 [Crassostrea gigas]
Length = 1073
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 144/364 (39%), Positives = 207/364 (56%), Gaps = 49/364 (13%)
Query: 5 ADNETAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATV 64
D+ ++ ELC+ LN+D T +EAW +Y+++ YTLEG Q+HWL C+LY +CRK+
Sbjct: 7 TDDAVERRYNELCLDLNMDKGTKEEAWESYQKIKTKYTLEGDQMHWLACALYEACRKSVT 66
Query: 65 PTVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAV 124
PTV T+EGN V LT LL+ K SL QF NK +KW+DM LP F K+ +LERNFAV
Sbjct: 67 PTVGRG-TMEGNGVSLTRLLRSAKFSLIQFFNKMKKWSDMAGLPQEFIDKVNKLERNFAV 125
Query: 125 SKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLD 184
S VIF K+ P+F ++F+ P R+ K++ + CTST+VF F W +F+ K +
Sbjct: 126 STVIFKKFEPIFSDIFQHPTDSHQNKQNRNKKQRRMPCTSTEVFNFCWTMFIQVKGHFPA 185
Query: 185 VSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISI 244
+S+DLVNS+HLL+ D YAN + +D++NP FEG+P +F + + P + PC+I
Sbjct: 186 ISDDLVNSYHLLLCCLDWFYANALMGGRKDLLNPSFEGLPEDFGNRDWKPPTESPCLIKY 245
Query: 245 LCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPG 304
LC H+G ++ E +V+ W P K + D
Sbjct: 246 LCDKHEGLEI---------------------EAKVIKEHWW---KPHIKKLFD------- 274
Query: 305 CEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEE----------------YILSVGDFDE 348
++ L+G + LSA+LE NFD N K +N+ YE+ Y+LSVGDFDE
Sbjct: 275 -KKILKGKPDTLSAVLEVGNFDANKKSINEAYEDYPLNYSSKSMNSEYEAYVLSVGDFDE 333
Query: 349 RIFL 352
R+FL
Sbjct: 334 RVFL 337
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 239 PCIISI--LCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P I+ I L +H + +I+R E SRD+VKHLN EE +L+SLAW S SPLW I+
Sbjct: 637 PWIVEIFNLSPYHFYKVIEIIIRTEEGFSRDVVKHLNHIEESILESLAWKSESPLWDAIK 696
Query: 297 DSGQEIPGCEQKLRGNIEDL 316
+S +PGCE + N +D+
Sbjct: 697 ESS--VPGCEDVVLPNEQDV 714
>gi|297698736|ref|XP_002826465.1| PREDICTED: retinoblastoma-like protein 2 [Pongo abelii]
Length = 1139
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 148/339 (43%), Positives = 205/339 (60%), Gaps = 36/339 (10%)
Query: 15 ELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTIE 74
ELC LN+D EAW++Y+ +S YTLEG+ LHWL C+LYV+CRK +VPTV S T+E
Sbjct: 51 ELCSRLNMDEAARAEAWDSYRSISESYTLEGNDLHWLACALYVACRK-SVPTV-SKGTVE 108
Query: 75 GNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLP 134
GN V LT +LK + SL +F NK +KW DM LP FR + RLERNF VS VIF KY P
Sbjct: 109 GNYVSLTRILKCSEQSLIEFFNKMKKWEDMANLPPHFRERTERLERNFTVSAVIFKKYEP 168
Query: 135 MFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFH 194
+F+++FK P +E R K++ CT +++F F+W+LF+ K + +S+DLVNS+H
Sbjct: 169 IFQDIFKYPQ-EEQPRQQRGRKQRRQPCTVSEIFHFSWVLFIYAKGNFPMISDDLVNSYH 227
Query: 195 LLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGCK 253
LL+ DL+Y N +Q S +++VNP+F+G+ +F P DPPCII LC HDG
Sbjct: 228 LLLCALDLVYGNALQCSNRKELVNPNFKGLSEDFHAKDSKPSSDPPCIIEKLCSLHDGLV 287
Query: 254 LCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNI 313
L ++ I +H W P + + + ++ L+G
Sbjct: 288 L---------EAKGIKEHF------------W---KPYIRKLYE--------KKLLKGKE 315
Query: 314 EDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
E+L+ LEP NF +FK +NK YEEY+LSVG+ DERIFL
Sbjct: 316 ENLTGFLEPGNFGESFKAINKAYEEYVLSVGNLDERIFL 354
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW SPLW+ I D+ +P CE+
Sbjct: 570 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWEKIRDNENRVPTCEE 621
>gi|416031|emb|CAA53661.1| 130K protein [Homo sapiens]
gi|739072|prf||2002263A E1A-associated protein gp130
Length = 1139
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 149/339 (43%), Positives = 204/339 (60%), Gaps = 36/339 (10%)
Query: 15 ELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTIE 74
ELC LN+D EAW++Y+ MS YTLEG+ LHWL C+LYV+CRK +VPTV S T+E
Sbjct: 51 ELCSRLNMDEAARPEAWDSYRSMSESYTLEGNDLHWLACALYVACRK-SVPTV-SKGTVE 108
Query: 75 GNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLP 134
GN V LT +LK + SL +F NK +KW DM LP FR + RLERNF VS VIF KY P
Sbjct: 109 GNYVSLTRILKCSEQSLIEFFNKMKKWEDMANLPPHFRERTERLERNFTVSAVIFKKYEP 168
Query: 135 MFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFH 194
+F+++FK P +E R K++ CT +++F F W+LF+ K + +S+DLVNS+H
Sbjct: 169 IFQDIFKYPQ-EEQPRQQRGRKQRRQPCTVSEIFHFCWVLFIYAKGNFPMISDDLVNSYH 227
Query: 195 LLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGCK 253
LL+ DL+Y N +Q S +++VNP+F+G+ +F P DPPCII LC HDG
Sbjct: 228 LLLCALDLVYGNALQCSNRKELVNPNFKGLSEDFHAKDSKPSSDPPCIIEKLCSLHDGLV 287
Query: 254 LCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNI 313
L ++ I +H W P + + + ++ L+G
Sbjct: 288 L---------EAKGIKEHF------------W---KPYIRKLYE--------KKLLKGKE 315
Query: 314 EDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
E+L+ LEP NF +FK +NK YEEY+LSVG+ DERIFL
Sbjct: 316 ENLTGFLEPGNFGESFKAINKAYEEYVLSVGNLDERIFL 354
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW SPLW+ I D+ +P CE+
Sbjct: 570 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWEKIRDNENRVPTCEE 621
>gi|395839424|ref|XP_003792589.1| PREDICTED: retinoblastoma-like protein 2 [Otolemur garnettii]
Length = 1139
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 148/346 (42%), Positives = 206/346 (59%), Gaps = 36/346 (10%)
Query: 8 ETAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTV 67
+T + ELC LN+D EAW++Y+ +S YTLEG+ LHWL C+LYV+CRK +VPTV
Sbjct: 44 QTQLRFDELCSRLNMDEAARAEAWDSYRSISESYTLEGNDLHWLACALYVACRK-SVPTV 102
Query: 68 NSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKV 127
S T+EGN V LT +L+ + SL +F NK +KW DM LP FR + RLERNF VS V
Sbjct: 103 -SKGTVEGNYVSLTRILRCSEQSLIEFFNKMKKWEDMANLPPHFRERTQRLERNFTVSAV 161
Query: 128 IFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSN 187
IF KY P+F+++FK P +E R K++ CT +++F F W+LF+ K + +S+
Sbjct: 162 IFKKYEPIFQDIFKYPQ-EEQPRQQRGRKQRRQPCTVSEIFHFCWVLFIYAKGNFPMISD 220
Query: 188 DLVNSFHLLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILC 246
DLVNS+HLL+ DL+Y N +Q S +++VNP+F+G+ +F P DPPC+I LC
Sbjct: 221 DLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDFHAKEPKPSSDPPCVIEKLC 280
Query: 247 KHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCE 306
HDG L ++ I +H W P + + + +
Sbjct: 281 SSHDGLVL---------EAKGIKEHF------------W---KPYIRKLYE--------K 308
Query: 307 QKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+ LRG E L+ LEP NF +FK +NK YEEY+LSVG+ DERIFL
Sbjct: 309 KILRGKEETLTGFLEPGNFAESFKAINKAYEEYVLSVGNLDERIFL 354
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 20/140 (14%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIED 315
V +RAE L R++VKHLN EEQ+LD LAW SPLW+ I D+ +P CE+
Sbjct: 570 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWERIRDNENRVPTCEE-------- 621
Query: 316 LSAILEPENFDYNFKV-------VNKMYEEYILSVGDFDERIFLPK--FQSFDETAPGSS 366
++ P+N + ++ + E G I P + + G++
Sbjct: 622 ---VMPPQNLERADEICIGGSPLTPRRVSEVRADTGGLGRSITSPTTLYDRYSSPTAGTT 678
Query: 367 GPGLDDLSPAPAPGGAPPEV 386
L S +P+ GGAP +
Sbjct: 679 RRRLFVESDSPSEGGAPGRI 698
>gi|291390125|ref|XP_002711566.1| PREDICTED: retinoblastoma-like 2 (p130) [Oryctolagus cuniculus]
Length = 1139
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 149/355 (41%), Positives = 210/355 (59%), Gaps = 39/355 (10%)
Query: 2 GQLADNETAHQHQ---ELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVS 58
Q A + T Q ELC LN+D EAW++Y+ MS YTLEG+ LHWL C+LYV+
Sbjct: 35 AQSAGSPTPQIQQRFDELCSRLNMDEAARAEAWDSYRSMSESYTLEGNDLHWLACALYVA 94
Query: 59 CRKATVPTVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARL 118
CRK +VPTV S T+EGN V LT +L+ + SL +F NK +KW DM LP FR + RL
Sbjct: 95 CRK-SVPTV-SKGTVEGNYVSLTRILRCSEQSLIEFFNKMKKWEDMANLPPHFRERTERL 152
Query: 119 ERNFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLT 178
ERNF VS VIF KY P+F+++FK P +E R K++ CT +++F F W+LF+
Sbjct: 153 ERNFTVSAVIFKKYEPIFQDIFKYPQ-EEQPRQQRGRKQRRQPCTVSEIFHFCWVLFIYA 211
Query: 179 KAEYLDVSNDLVNSFHLLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDD 237
K + +S+DLVNS+HLL+ DL+Y N +Q S +++VNP+F+G+ +F + P D
Sbjct: 212 KGNFPMISDDLVNSYHLLLCALDLVYGNALQCSHRKELVNPNFKGLSEDFHAKDYKPSSD 271
Query: 238 PPCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIED 297
PPC+I LC HDG L ++ I +H W P + + +
Sbjct: 272 PPCVIEKLCSLHDGLVL---------EAKGIKEHF------------W---KPYIRKLYE 307
Query: 298 SGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
++ L+G E+L+ L+P NF +FK +NK YEEY+LSVG+ DER+FL
Sbjct: 308 --------KKLLKGKEENLTGFLDPGNFGESFKAINKAYEEYVLSVGNLDERVFL 354
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 37/52 (71%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW S+SPLW I D+ +P CE+
Sbjct: 570 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKSDSPLWDRIRDNENRVPACEE 621
>gi|351708560|gb|EHB11479.1| Retinoblastoma-like protein 2 [Heterocephalus glaber]
Length = 1141
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 146/339 (43%), Positives = 203/339 (59%), Gaps = 36/339 (10%)
Query: 15 ELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTIE 74
ELC LN+D EAW++Y+ MS YTLEG+ LHWL C+LYV+CRK +VPTV S T+E
Sbjct: 53 ELCSRLNMDEAARAEAWDSYRSMSESYTLEGNDLHWLACALYVACRK-SVPTV-SKGTVE 110
Query: 75 GNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLP 134
GN V LT +L+ + SL +F NK +KW DM LP FR + RLERNF VS VIF KY P
Sbjct: 111 GNYVSLTRILRCSQQSLIEFFNKMKKWEDMANLPPHFRERTERLERNFTVSAVIFKKYEP 170
Query: 135 MFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFH 194
+F+++FK P +E R K++ CT +++F F W+LF+ K + +S+DLVNS+H
Sbjct: 171 IFQDIFKYPQ-EEQPRQQRGRKQRRQPCTVSEIFHFCWVLFIYAKGNFPMISDDLVNSYH 229
Query: 195 LLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGCK 253
LL+ DL+Y N +Q S +++VNP+F+G+ +F P DPPC+I LC HDG
Sbjct: 230 LLLCALDLVYGNALQCSNRKELVNPNFKGLSEDFHTKDSKPSSDPPCVIEKLCSLHDGLV 289
Query: 254 LCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNI 313
L ++ I +H W P + + + ++ L+G
Sbjct: 290 L---------EAKGIKEHF------------W---KPYIRKLYE--------KKLLKGKE 317
Query: 314 EDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
E+L+ LEP NF +FK +N YEEY+LSVG+ DERIFL
Sbjct: 318 ENLTGFLEPGNFGESFKAINNAYEEYVLSVGNLDERIFL 356
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 35/52 (67%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW SPLW I D+ +P CE+
Sbjct: 572 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWDKIRDNDNRVPTCEE 623
>gi|344289259|ref|XP_003416362.1| PREDICTED: retinoblastoma-like protein 2 [Loxodonta africana]
Length = 1139
Score = 274 bits (700), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 149/346 (43%), Positives = 205/346 (59%), Gaps = 36/346 (10%)
Query: 8 ETAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTV 67
+T + +ELC LN+D T EAW +Y+ MS YTLEG+ LHWL C+LYV+CRK VPTV
Sbjct: 44 QTQLRFEELCGRLNMDETARAEAWESYRRMSESYTLEGNDLHWLACALYVACRKC-VPTV 102
Query: 68 NSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKV 127
S T+EGN V LT +L+ + SL +F NK +KW DM LP FR + RLERNF VS V
Sbjct: 103 -SKGTVEGNYVSLTRILRCSEQSLIEFFNKMKKWEDMANLPPHFRERTERLERNFTVSAV 161
Query: 128 IFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSN 187
IF KY P+F+++FK P +E R K++ CT ++VF+F W+LF+ K + +S+
Sbjct: 162 IFKKYEPIFRDIFKYPQ-EEQPRQQRGRKQRRQPCTVSEVFQFCWVLFIYAKGNFPMISD 220
Query: 188 DLVNSFHLLIATCDLIYANVIQSKLR-DIVNPDFEGMPSNFLDSHFAPLDDPPCIISILC 246
DLVNS+HLL+ DL+Y N +Q R ++VNP+F+G +F P DPPC+I LC
Sbjct: 221 DLVNSYHLLLCALDLVYGNALQCPNRKELVNPNFKGFSEDFHGKDSKPSSDPPCVIEKLC 280
Query: 247 KHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCE 306
HDG L ++ I +H W P + + + +
Sbjct: 281 SLHDGLVL---------EAKGIKEHF------------W---KPYIRKLYE--------K 308
Query: 307 QKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+ L+G E+L+ LEP NF FK ++K YEEY+LSVG+ DERIFL
Sbjct: 309 KLLKGKEENLTGFLEPGNFGDTFKAISKAYEEYVLSVGNLDERIFL 354
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 35/52 (67%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V VRAE L R++VKHLN EEQ+LD LAW SPLW I D+ +P CE+
Sbjct: 570 VFVRAEEGLCREVVKHLNQIEEQILDHLAWKPGSPLWDRIRDNDNRVPTCEE 621
>gi|156399369|ref|XP_001638474.1| predicted protein [Nematostella vectensis]
gi|156225595|gb|EDO46411.1| predicted protein [Nematostella vectensis]
Length = 1083
Score = 273 bits (699), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 146/348 (41%), Positives = 204/348 (58%), Gaps = 34/348 (9%)
Query: 6 DNETAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVP 65
D T + +C LN+D TA+ AW++Y+ + +YTLEG LHWL C+LYV+CR++ VP
Sbjct: 9 DTITKERFDNVCSELNMDEETAESAWSSYETIRTNYTLEGDSLHWLACALYVACRRSVVP 68
Query: 66 TVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVS 125
TV+S+ T+EGN V LT LL+ K+SL QF +K +KW DM FR KI LERNF VS
Sbjct: 69 TVDSSGTVEGNCVSLTRLLRASKLSLIQFFSKMKKWLDMSNASSEFRKKIEHLERNFQVS 128
Query: 126 KVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDV 185
VIF KY P+F ++FK P D R K + C+ + VF F W L+V K + +
Sbjct: 129 TVIFNKYRPIFLDLFKNPSEDTPKAQ-RSRKSRKQPCSISDVFSFCWTLYVEAKGNFPAI 187
Query: 186 SNDLVNSFHLLIATCDLIYANVIQSK-LRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISI 244
S+DLVNS+HLL+ DL+Y+N + ++ RD++N +FEG+PS+F D PCI+ +
Sbjct: 188 SDDLVNSYHLLLCCLDLMYSNALAARHRRDLINTEFEGLPSDFNTRDVRGPSDAPCIVDV 247
Query: 245 LCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPG 304
LC + G +++ A + I +H WK E
Sbjct: 248 LCTKYQG----IVLEA-----KSIKEH-------------------YWKPFVQKLFE--- 276
Query: 305 CEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
++ LRG+ E LS IL+ NF+ N+K +NK YEEY+LS GDFDERIFL
Sbjct: 277 -KRVLRGHEESLSGILDLGNFEANWKAINKEYEEYVLSAGDFDERIFL 323
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 257 IVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCE 306
+++AE LSRD+VKHLN EEQVL+SLAW +SPLW IE +G +P CE
Sbjct: 544 LIKAEDGLSRDVVKHLNHIEEQVLESLAWSGDSPLWMTIEQAGG-VPSCE 592
>gi|307194380|gb|EFN76703.1| Retinoblastoma-like protein 1 [Harpegnathos saltator]
Length = 1025
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 149/370 (40%), Positives = 205/370 (55%), Gaps = 56/370 (15%)
Query: 1 MGQLADNE--TAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVS 58
MGQ D E T +HQ+LC LN+D+ G QLHW+GC+LYV+
Sbjct: 1 MGQSDDIEDSTYSRHQDLCQKLNMDA--------------------GDQLHWIGCALYVA 40
Query: 59 CRKATVPTVN-SNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIAR 117
CRK+++PTV + +EGN V LT LL+ C + L +F K + WADM +P FR KI +
Sbjct: 41 CRKSSIPTVGRTGANVEGNYVSLTRLLQLCNLPLIEFFRKSKSWADMANMPQDFRIKIEK 100
Query: 118 LERNFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVL 177
LE NF+VS VIF KY P+F ++FK P D + R + K + CT +VFEF W LF+
Sbjct: 101 LEGNFSVSMVIFKKYQPIFTDIFKDPRED-VSRPPRSRRHKAVPCTPARVFEFCWTLFIY 159
Query: 178 TKAEYLDVSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDD 237
K D+S+DLVNS+HLL+ CDLIY+N + + +D++NP+F G+P NF D ++P
Sbjct: 160 IKGAIPDISDDLVNSYHLLLVCCDLIYSNALVANRKDLLNPNFPGLPENFNDEDYSPPQT 219
Query: 238 PPCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIED 297
CI+S+LC+ HD + V E + I K N
Sbjct: 220 ADCIVSLLCERHDAIPVEAKVIKEYCMKNYINKLFN------------------------ 255
Query: 298 SGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFLPKFQS 357
E+ LRG+ + S ILE NFD N K +NK YE+ +LSVGDFDERIFL +++
Sbjct: 256 --------ERLLRGDQSNFSGILEALNFDGNSKAINKAYEQRVLSVGDFDERIFLAEWRR 307
Query: 358 FDETAPGSSG 367
+ SSG
Sbjct: 308 IRLKSISSSG 317
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ-KLRGNIE 314
+IVR E LSR++VKHLN EE++L+SLAW S+SPLW+ IE +P CE+ L G +E
Sbjct: 552 IIVRTEDQLSREVVKHLNQIEEKILESLAWQSDSPLWQTIESLADGVPSCEEVSLPGTLE 611
>gi|355756774|gb|EHH60382.1| Retinoblastoma-related protein 2 [Macaca fascicularis]
Length = 1139
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 148/339 (43%), Positives = 203/339 (59%), Gaps = 36/339 (10%)
Query: 15 ELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTIE 74
ELC LN+D EAW++Y+ MS YTLEG+ LHWL C+LYV+CRK +VPTV S T+E
Sbjct: 51 ELCRRLNMDEAARAEAWDSYRSMSESYTLEGNDLHWLACALYVACRK-SVPTV-SKGTVE 108
Query: 75 GNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLP 134
GN V LT +LK + SL +F NK +KW DM LP FR + RLERNF VS VIF KY P
Sbjct: 109 GNYVSLTRILKCSEQSLIEFFNKMKKWEDMANLPPHFRERTERLERNFTVSAVIFKKYEP 168
Query: 135 MFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFH 194
+F+++FK P +E R K++ CT +++F F W+LF+ K + +S+DLVNS+H
Sbjct: 169 IFQDIFKYPQ-EEQPRQQRGRKQRRQPCTVSEIFHFCWVLFIYAKGNFPMISDDLVNSYH 227
Query: 195 LLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGCK 253
LL+ DL+Y N +Q S +++VN +F+G+ +F P DPPCII LC HDG
Sbjct: 228 LLLCALDLVYGNALQCSNRKELVNSNFKGLSEDFHAKDSKPSSDPPCIIEKLCSLHDGLV 287
Query: 254 LCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNI 313
L ++ I +H W P + + + ++ L+G
Sbjct: 288 L---------EAKGIKEHF------------W---KPYIRKLYE--------KKLLKGKE 315
Query: 314 EDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
E+L+ LEP NF +FK +NK YEEY+LSVG+ DERIFL
Sbjct: 316 ENLTGFLEPGNFGESFKAINKAYEEYVLSVGNLDERIFL 354
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW SPLW+ I D+ +P CE+
Sbjct: 570 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWEKIRDNENRVPTCEE 621
>gi|402908378|ref|XP_003916920.1| PREDICTED: retinoblastoma-like protein 2 [Papio anubis]
Length = 1139
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 148/339 (43%), Positives = 203/339 (59%), Gaps = 36/339 (10%)
Query: 15 ELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTIE 74
ELC LN+D EAW++Y+ MS YTLEG+ LHWL C+LYV+CRK +VPTV S T+E
Sbjct: 51 ELCSRLNMDEAARAEAWDSYRSMSESYTLEGNDLHWLACALYVACRK-SVPTV-SKGTVE 108
Query: 75 GNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLP 134
GN V LT +LK + SL +F NK +KW DM LP FR + RLERNF VS VIF KY P
Sbjct: 109 GNYVSLTRILKCSEQSLIEFFNKMKKWEDMANLPPHFRERTERLERNFTVSAVIFKKYEP 168
Query: 135 MFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFH 194
+F+++FK P +E R K++ CT +++F F W+LF+ K + +S+DLVNS+H
Sbjct: 169 IFQDIFKYPQ-EEQPRQQRARKQRRQPCTVSEIFHFCWVLFIYAKGNFPMISDDLVNSYH 227
Query: 195 LLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGCK 253
LL+ DL+Y N +Q S +++VN +F+G+ +F P DPPCII LC HDG
Sbjct: 228 LLLCALDLVYGNALQCSNRKELVNSNFKGLSEDFHAKDSKPSSDPPCIIEKLCSLHDGLV 287
Query: 254 LCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNI 313
L ++ I +H W P + + + ++ L+G
Sbjct: 288 L---------EAKGIKEHF------------W---KPYIRKLYE--------KKLLKGKE 315
Query: 314 EDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
E+L+ LEP NF +FK +NK YEEY+LSVG+ DERIFL
Sbjct: 316 ENLTGFLEPGNFGESFKAINKAYEEYVLSVGNLDERIFL 354
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW SPLW+ I D+ +P CE+
Sbjct: 570 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWEKIRDNENRVPTCEE 621
>gi|383420483|gb|AFH33455.1| retinoblastoma-like protein 2 [Macaca mulatta]
gi|384948592|gb|AFI37901.1| retinoblastoma-like protein 2 [Macaca mulatta]
Length = 1141
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 148/339 (43%), Positives = 203/339 (59%), Gaps = 36/339 (10%)
Query: 15 ELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTIE 74
ELC LN+D EAW++Y+ MS YTLEG+ LHWL C+LYV+CRK +VPTV S T+E
Sbjct: 51 ELCSRLNMDEAARAEAWDSYRSMSESYTLEGNDLHWLACALYVACRK-SVPTV-SKGTVE 108
Query: 75 GNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLP 134
GN V LT +LK + SL +F NK +KW DM LP FR + RLERNF VS VIF KY P
Sbjct: 109 GNYVSLTRILKCSEQSLIEFFNKMKKWEDMANLPPHFRERTERLERNFTVSAVIFKKYEP 168
Query: 135 MFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFH 194
+F+++FK P +E R K++ CT +++F F W+LF+ K + +S+DLVNS+H
Sbjct: 169 IFQDIFKYPQ-EEQPRQQRGRKQRRQPCTVSEIFHFCWVLFIYAKGNFPMISDDLVNSYH 227
Query: 195 LLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGCK 253
LL+ DL+Y N +Q S +++VN +F+G+ +F P DPPCII LC HDG
Sbjct: 228 LLLCALDLVYGNALQCSNRKELVNCNFKGLSEDFHAKDSKPSSDPPCIIEKLCSLHDGLV 287
Query: 254 LCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNI 313
L ++ I +H W P + + + ++ L+G
Sbjct: 288 L---------EAKGIKEHF------------W---KPYIRKLYE--------KKLLKGKE 315
Query: 314 EDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
E+L+ LEP NF +FK +NK YEEY+LSVG+ DERIFL
Sbjct: 316 ENLTGFLEPGNFGESFKAINKAYEEYVLSVGNLDERIFL 354
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW SPLW+ I D+ +P CE+
Sbjct: 570 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWEKIRDNENRVPTCEE 621
>gi|355710195|gb|EHH31659.1| Retinoblastoma-related protein 2 [Macaca mulatta]
Length = 1139
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 148/339 (43%), Positives = 203/339 (59%), Gaps = 36/339 (10%)
Query: 15 ELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTIE 74
ELC LN+D EAW++Y+ MS YTLEG+ LHWL C+LYV+CRK +VPTV S T+E
Sbjct: 51 ELCSRLNMDEAARAEAWDSYRSMSESYTLEGNDLHWLACALYVACRK-SVPTV-SKGTVE 108
Query: 75 GNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLP 134
GN V LT +LK + SL +F NK +KW DM LP FR + RLERNF VS VIF KY P
Sbjct: 109 GNYVSLTRILKCSEQSLIEFFNKMKKWEDMANLPPHFRERTERLERNFTVSAVIFKKYEP 168
Query: 135 MFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFH 194
+F+++FK P +E R K++ CT +++F F W+LF+ K + +S+DLVNS+H
Sbjct: 169 IFQDIFKYPQ-EEQPRQQRGRKQRRQPCTVSEIFHFCWVLFIYAKGNFPMISDDLVNSYH 227
Query: 195 LLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGCK 253
LL+ DL+Y N +Q S +++VN +F+G+ +F P DPPCII LC HDG
Sbjct: 228 LLLCALDLVYGNALQCSNRKELVNCNFKGLSEDFHAKDSKPSSDPPCIIEKLCSLHDGLV 287
Query: 254 LCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNI 313
L ++ I +H W P + + + ++ L+G
Sbjct: 288 L---------EAKGIKEHF------------W---KPYIRKLYE--------KKLLKGKE 315
Query: 314 EDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
E+L+ LEP NF +FK +NK YEEY+LSVG+ DERIFL
Sbjct: 316 ENLTGFLEPGNFGESFKAINKAYEEYVLSVGNLDERIFL 354
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW SPLW+ I D+ +P CE+
Sbjct: 570 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWEKIRDNENRVPTCEE 621
>gi|354471659|ref|XP_003498058.1| PREDICTED: retinoblastoma-like protein 2 [Cricetulus griseus]
gi|344235903|gb|EGV92006.1| Retinoblastoma-like protein 2 [Cricetulus griseus]
Length = 1136
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 145/343 (42%), Positives = 204/343 (59%), Gaps = 36/343 (10%)
Query: 11 HQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSN 70
+ +ELC LN+D EAW +Y+ MS YTLEG+ LHWL C+LYV+CRK +VPTV S
Sbjct: 45 QRFEELCSRLNMDEAARAEAWGSYRSMSESYTLEGNDLHWLACALYVACRK-SVPTV-SK 102
Query: 71 RTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFT 130
T+EGN V LT +L+ + SL +F NK +KW DM LP FR + RLERNF VS VIF
Sbjct: 103 GTVEGNYVSLTRILRCSEQSLIEFFNKMKKWEDMANLPPQFRERTERLERNFTVSAVIFK 162
Query: 131 KYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLV 190
KY P+F+++FK P +E R K++ CT++++F F W+LF+ K + +S+DLV
Sbjct: 163 KYEPIFQDIFKYPQ-EEQPRQQRGRKQRRQPCTTSEIFHFCWVLFIYAKGNFPMISDDLV 221
Query: 191 NSFHLLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHH 249
NS+HLL+ DL+Y N +Q S +++VNP+F+G+ + P DPPC+I LC H
Sbjct: 222 NSYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDCHPKDSKPSSDPPCVIEKLCSLH 281
Query: 250 DGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKL 309
DG L ++ I +H W P + + + ++ L
Sbjct: 282 DGLVL---------EAKGIKEHF------------W---KPYIRKLFE--------KKLL 309
Query: 310 RGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+G E+L+ LEP NF +FK VNK YEEY+L+ G+ DERIFL
Sbjct: 310 KGKEENLTGFLEPGNFGESFKAVNKAYEEYVLAAGNLDERIFL 352
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW + SPLW I D+ +P CE+
Sbjct: 568 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKTESPLWDRIRDNENRVPTCEE 619
>gi|327276415|ref|XP_003222965.1| PREDICTED: LOW QUALITY PROTEIN: retinoblastoma-like protein 2-like
[Anolis carolinensis]
Length = 1116
Score = 271 bits (692), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 151/345 (43%), Positives = 208/345 (60%), Gaps = 36/345 (10%)
Query: 9 TAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVN 68
T +++ELC +LN+D EAW +++ M +YTLEG+ LHWL C+LYV+CRKA VPTV
Sbjct: 39 TRQRYEELCSSLNMDERARAEAWLSFQSMRRNYTLEGNDLHWLACALYVACRKA-VPTV- 96
Query: 69 SNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVI 128
S T+EGN V L +L+ SL +F NK +KW DM LP FR + RLERNF VS VI
Sbjct: 97 SRGTVEGNYVSLIRILRCSGQSLIEFFNKMKKWEDMANLPSQFRERTTRLERNFTVSAVI 156
Query: 129 FTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSND 188
F KY P+F+++FK P D+ R K++ CT ++VF+F W+LFV K + +S+D
Sbjct: 157 FKKYEPIFQDIFKYPQ-DDPPRQQRGRKQRRQPCTVSEVFQFCWVLFVYAKGNFPMISDD 215
Query: 189 LVNSFHLLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCK 247
LVNS+HLL+ DL+YAN +Q +D++NP F+G+P +F F L +PPCII LC
Sbjct: 216 LVNSYHLLLCVLDLVYANSLQCPNHKDLLNPSFKGLPEDFQSKDFKLLSEPPCIIEKLCS 275
Query: 248 HHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
HDG L EA + I +H W P + + + ++
Sbjct: 276 LHDGLLL------EA---KGIKEHF------------W---KPYVRRLFE--------KK 303
Query: 308 KLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
L+G E+L+ L+P NF + K +NK YEEYILSVG+ DERIFL
Sbjct: 304 ILKGKEENLAGFLDPGNFGESLKNINKAYEEYILSVGNLDERIFL 348
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 39/52 (75%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
+++RAE L R++VKHLN EEQ+L+SLAW SPLW+ I ++ ++P CE+
Sbjct: 564 ILIRAEDGLCREVVKHLNHIEEQILESLAWKEESPLWEKIRENDNKVPTCEE 615
>gi|149032672|gb|EDL87542.1| retinoblastoma-like 2, isoform CRA_a [Rattus norvegicus]
Length = 1135
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 149/349 (42%), Positives = 208/349 (59%), Gaps = 40/349 (11%)
Query: 7 NETAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPT 66
++ + +ELC LN+D EAW++Y+ MS YTLEG+ LHWL C+LYV+CRK +VPT
Sbjct: 40 HQIQQRFEELCSRLNMDEAARAEAWSSYRSMSESYTLEGNDLHWLACALYVACRK-SVPT 98
Query: 67 VNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSK 126
V S T EGN V LT +L+ + SL +F NK +KW DM LP FR + RLERNF VS
Sbjct: 99 V-SKGTAEGNYVSLTRILRCSEQSLIEFFNKMKKWEDMANLPPHFRERTERLERNFTVSA 157
Query: 127 VIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVS 186
VIF KY P+F+++FK P +E R K++ CT++++F F W+LF+ K + +S
Sbjct: 158 VIFKKYEPIFQDIFKYPQ-EEQPRQQRGRKQRRQPCTTSEIFHFCWVLFIYAKGNFPMIS 216
Query: 187 NDLVNSFHLLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNF--LDSHFAPLDDPPCIIS 243
+DLVNS+HLL+ DL+Y N +Q S +++VNP+F+G+ + DSH P DPPC+I
Sbjct: 217 DDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGVSEDGHPRDSH--PSSDPPCVIE 274
Query: 244 ILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIP 303
LC HDG L ++ I +H W P + + +
Sbjct: 275 KLCSLHDGLVL---------EAKGIKQHF------------W---KPYIRKLFE------ 304
Query: 304 GCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
++ LRG E+L+ LEP NF +FK VNK YEEY+L+ G DERIFL
Sbjct: 305 --KKLLRGKEENLTGFLEPGNFAESFKAVNKAYEEYVLATGSLDERIFL 351
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW + SPLW I D+ +P CE+
Sbjct: 567 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKTKSPLWDRIRDNENRVPTCEE 618
>gi|13592041|ref|NP_112356.1| retinoblastoma-like protein 2 [Rattus norvegicus]
gi|6685833|sp|O55081.1|RBL2_RAT RecName: Full=Retinoblastoma-like protein 2; AltName: Full=130 kDa
retinoblastoma-associated protein; Short=p130; AltName:
Full=PPAR-alpha-interacting complex protein 128;
Short=PRIC128; AltName: Full=Retinoblastoma-related
protein 2; Short=RBR-2; AltName: Full=pRb2
gi|2760811|dbj|BAA24196.1| p130 [Rattus norvegicus]
Length = 1135
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 149/349 (42%), Positives = 208/349 (59%), Gaps = 40/349 (11%)
Query: 7 NETAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPT 66
++ + +ELC LN+D EAW++Y+ MS YTLEG+ LHWL C+LYV+CRK +VPT
Sbjct: 40 HQIQQRFEELCSRLNMDEAARAEAWSSYRSMSESYTLEGNDLHWLACALYVACRK-SVPT 98
Query: 67 VNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSK 126
V S T EGN V LT +L+ + SL +F NK +KW DM LP FR + RLERNF VS
Sbjct: 99 V-SKGTAEGNYVSLTRILRCSEQSLIEFFNKMKKWEDMANLPPHFRERTERLERNFTVSA 157
Query: 127 VIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVS 186
VIF KY P+F+++FK P +E R K++ CT++++F F W+LF+ K + +S
Sbjct: 158 VIFKKYEPIFQDIFKYPQ-EEQPRQQRGRKQRRQPCTTSEIFHFCWVLFIYAKGNFPMIS 216
Query: 187 NDLVNSFHLLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNF--LDSHFAPLDDPPCIIS 243
+DLVNS+HLL+ DL+Y N +Q S +++VNP+F+G+ + DSH P DPPC+I
Sbjct: 217 DDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGVSEDGHPRDSH--PSSDPPCVIE 274
Query: 244 ILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIP 303
LC HDG L ++ I +H W P + + +
Sbjct: 275 KLCSLHDGLVL---------EAKGIKQHF------------W---KPYIRKLFE------ 304
Query: 304 GCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
++ LRG E+L+ LEP NF +FK VNK YEEY+L+ G DERIFL
Sbjct: 305 --KKLLRGKEENLTGFLEPGNFAESFKAVNKAYEEYVLATGSLDERIFL 351
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW + SPLW I D+ +P CE+
Sbjct: 567 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKTKSPLWDRIRDNENRVPTCEE 618
>gi|403292586|ref|XP_003937318.1| PREDICTED: retinoblastoma-like protein 2 [Saimiri boliviensis
boliviensis]
Length = 1082
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 144/332 (43%), Positives = 199/332 (59%), Gaps = 36/332 (10%)
Query: 22 IDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTIEGNLVCLT 81
+D EAW++Y+ MS YTLEG+ LHWL C+LYV+CRK +VPTVN T+EGN V LT
Sbjct: 1 MDEAARAEAWDSYRSMSESYTLEGNDLHWLACALYVACRK-SVPTVNKG-TVEGNYVSLT 58
Query: 82 SLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLPMFKEMFK 141
+LK + SL +F NK +KW DM LP FR + RLERNF VS VIF KY P+F+++FK
Sbjct: 59 RILKCSEQSLIEFFNKMKKWEDMANLPPHFRERTERLERNFTVSAVIFKKYEPIFQDIFK 118
Query: 142 PPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCD 201
P +E R K++ CT +++F F W+LF+ K + +S+DLVNS+HLL+ D
Sbjct: 119 YPQ-EEQPRQQRGRKQRRQPCTVSEIFHFCWVLFIYAKGNFPMISDDLVNSYHLLLCALD 177
Query: 202 LIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGCKLCVIVRA 260
L+Y N +Q S +++VNP+F+G+ +F P DPPCII LC HDG L
Sbjct: 178 LVYGNALQCSNRKELVNPNFKGLSEDFQAKDSKPSSDPPCIIEKLCSLHDGLVL------ 231
Query: 261 EASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIEDLSAIL 320
++ I +H W P + + + ++ L+G E+L+ L
Sbjct: 232 ---EAKGIKEHF------------W---KPYIRKLYE--------KKLLKGKEENLTGFL 265
Query: 321 EPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
EP NF +FK +NK YEEY+LSVG+ DERIFL
Sbjct: 266 EPGNFGESFKAINKAYEEYVLSVGNLDERIFL 297
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW SPLW+ I D+ +P CE+
Sbjct: 513 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWEKIRDNENRVPTCEE 564
>gi|357631172|gb|EHJ78820.1| putative retinoblastoma-like protein 1 isoform a [Danaus plexippus]
Length = 961
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 129/337 (38%), Positives = 200/337 (59%), Gaps = 32/337 (9%)
Query: 16 LCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTIEG 75
LC LN+D AK++ +Y E+ +YTL+G +LHW+ C+LYV+CR + PTV S + +EG
Sbjct: 18 LCSQLNVDPGAAKKSKESYSEIKQNYTLDGDELHWMACALYVACRTSITPTVQSGKAVEG 77
Query: 76 NLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLPM 135
N V LT LL+ C +SL QF NK + W +M + F+ +I RLER FAVS V+F K+ P+
Sbjct: 78 NCVSLTRLLRLCNISLIQFFNKIKNWMEMASMSTDFKDRITRLERKFAVSTVLFRKFQPI 137
Query: 136 FKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFHL 195
F+E+F + + + + K+K+ CT+ +FEF+W L+V K E+ + ++DLV+ +H+
Sbjct: 138 FQEIFSGLTNEPVKSNTKSKKQKLQPCTTNALFEFSWCLYVCVKGEFHNSADDLVDMYHV 197
Query: 196 LIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGCKLC 255
L++ D ++AN ++ D++NP F+G+PS++L F PPCIIS+LC+ +G +
Sbjct: 198 LLSCLDFVFANAFMARRYDVINPAFKGLPSDWLKDDFELPKKPPCIISVLCEIKEGLAV- 256
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIED 315
E + +W P+ K D G L+GN +
Sbjct: 257 --------------------EAATMKEYSW---RPVIKTFFDKG--------ILKGNNDQ 285
Query: 316 LSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
L+ +L+ NFD N K +N +YE Y+LSVG+FDERIFL
Sbjct: 286 LTGLLDIGNFDANLKSLNNLYETYVLSVGEFDERIFL 322
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 264 LSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPG 304
LSRD++KHLN EEQVL+SL W S+SPLW + S IP
Sbjct: 605 LSRDVIKHLNAVEEQVLESLVWTSDSPLWDQL--SKNPIPA 643
>gi|328718292|ref|XP_001943094.2| PREDICTED: retinoblastoma-like protein 1-like [Acyrthosiphon pisum]
Length = 697
Score = 267 bits (682), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 204/339 (60%), Gaps = 36/339 (10%)
Query: 15 ELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRT-I 73
+LC LN+D A AW Y + +Y+L+G HWL C++YV+CR T TV + T I
Sbjct: 21 DLCKGLNLDKNAASRAWETYLAVKENYSLDGDPSHWLACAIYVACRNVTEHTVGDSETLI 80
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
EGNLV LT LL+ C +SL F+ K +KWADM +P R KI +LE+NFAVS VIF K+
Sbjct: 81 EGNLVSLTRLLRLCNISLIHFIGKSKKWADMINMPPELRRKIDKLEKNFAVSMVIFKKFQ 140
Query: 134 PMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSF 193
P+F MF ++ R +KK+ + C+++K+FEF W LFV+ K+E+ D+S +LVNS+
Sbjct: 141 PIFAAMFNNTKDEQ--TKTRCSKKQKVTCSASKLFEFCWTLFVVAKSEFPDLSENLVNSY 198
Query: 194 HLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGCK 253
HLL+A CD +Y N++ + LRD++N F G+P +F + + P CII LC+ +DG
Sbjct: 199 HLLLACCDYVYTNILIADLRDLLNKSFGGLPHDFESTSYVLRSKPICIIDYLCQQYDGIT 258
Query: 254 LCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNI 313
T+ +V+ W +N L K IE + L+G+
Sbjct: 259 ---------------------TDAKVIKEYFWKTN--LKKLIE---------RKILKGDS 286
Query: 314 EDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
E L+ +L+ NFD+N+K +NK YE+Y+LSVG+FDERIFL
Sbjct: 287 E-LNLLLDVVNFDFNYKAINKRYEQYVLSVGEFDERIFL 324
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 34/48 (70%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIP 303
VIVR E L RD++KHLN EEQVLDSL+W S SPLW I + + IP
Sbjct: 530 VIVRVEDKLPRDMIKHLNRVEEQVLDSLSWQSESPLWDLINRNNKLIP 577
>gi|1255232|gb|AAC52598.1| retinoblastoma-related protein p130 [Mus musculus]
gi|1589572|prf||2211351A retinoblastoma protein p130
Length = 1135
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 143/347 (41%), Positives = 205/347 (59%), Gaps = 36/347 (10%)
Query: 7 NETAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPT 66
++ + +ELC LN+D EAW++Y+ MS YTLEG+ LHWL C+LYV+CRK +VPT
Sbjct: 40 HQIQQRFEELCSRLNMDEAARAEAWSSYRSMSESYTLEGNDLHWLACALYVACRK-SVPT 98
Query: 67 VNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSK 126
V S T EGN V LT +L+ + SL +F NK +KW DM LP FR + RLERNF VS
Sbjct: 99 V-SKGTAEGNYVSLTRILRCSEQSLIEFFNKMKKWEDMANLPPHFRERTERLERNFTVSA 157
Query: 127 VIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVS 186
VIF KY P+F+++FK P +E R K++ CT++++F F W+LF+ K + +S
Sbjct: 158 VIFKKYEPIFQDIFKYPQ-EEQPRQQRGRKQRRQPCTTSEIFHFCWVLFIYAKGNFPMIS 216
Query: 187 NDLVNSFHLLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISIL 245
+DLVNS+HLL+ DL+Y N +Q S +++VNP+F+G+ + DPPC+I L
Sbjct: 217 DDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDCHPKDSKASSDPPCVIEKL 276
Query: 246 CKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGC 305
C HDG L ++ I +H W P + + +
Sbjct: 277 CSLHDGLVL---------EAKGIKEHF------------W---KPYIRKLFE-------- 304
Query: 306 EQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
++ L+G E+L+ LEP NF +FK VNK YEEY+L+ G+ DER+FL
Sbjct: 305 KKLLKGKEENLTGFLEPGNFGESFKAVNKAYEEYVLAAGNLDERVFL 351
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW + SPLW I D+ +P CE+
Sbjct: 567 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKTKSPLWDRIRDNENRVPTCEE 618
>gi|18088202|gb|AAH20528.1| Retinoblastoma-like 2 [Mus musculus]
Length = 1135
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 143/347 (41%), Positives = 205/347 (59%), Gaps = 36/347 (10%)
Query: 7 NETAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPT 66
++ + +ELC LN+D EAW++Y+ MS YTLEG+ LHWL C+LYV+CRK +VPT
Sbjct: 40 HQIQQRFEELCSRLNMDEAARAEAWSSYRSMSESYTLEGNDLHWLACALYVACRK-SVPT 98
Query: 67 VNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSK 126
V S T EGN V LT +L+ + SL +F NK +KW DM LP FR + RLERNF VS
Sbjct: 99 V-SKGTAEGNYVSLTRILRCSEQSLIEFFNKMKKWEDMANLPPHFRERTERLERNFTVSA 157
Query: 127 VIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVS 186
VIF KY P+F+++FK P +E R K++ CT++++F F W+LF+ K + +S
Sbjct: 158 VIFKKYEPIFQDIFKYPQ-EEQPRQQRGRKQRRQPCTTSEIFHFCWVLFIYAKGNFPMIS 216
Query: 187 NDLVNSFHLLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISIL 245
+DLVNS+HLL+ DL+Y N +Q S +++VNP+F+G+ + DPPC+I L
Sbjct: 217 DDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDCHPKDSKASSDPPCVIEKL 276
Query: 246 CKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGC 305
C HDG L ++ I +H W P + + +
Sbjct: 277 CSLHDGLVL---------EAKGIKEHF------------W---KPYIRKLFE-------- 304
Query: 306 EQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
++ L+G E+L+ LEP NF +FK VNK YEEY+L+ G+ DER+FL
Sbjct: 305 KKLLKGKEENLTGFLEPGNFGESFKAVNKAYEEYVLAAGNLDERVFL 351
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW + SPLW I D+ +P CE+
Sbjct: 567 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKTKSPLWDRIRDNENRVPTCEE 618
>gi|170932488|ref|NP_035380.3| retinoblastoma-like protein 2 [Mus musculus]
gi|341942165|sp|Q64700.3|RBL2_MOUSE RecName: Full=Retinoblastoma-like protein 2; AltName: Full=130 kDa
retinoblastoma-associated protein; Short=p130; AltName:
Full=Retinoblastoma-related protein 2; Short=RBR-2;
AltName: Full=pRb2
gi|74213520|dbj|BAE35570.1| unnamed protein product [Mus musculus]
Length = 1135
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 143/347 (41%), Positives = 205/347 (59%), Gaps = 36/347 (10%)
Query: 7 NETAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPT 66
++ + +ELC LN+D EAW++Y+ MS YTLEG+ LHWL C+LYV+CRK +VPT
Sbjct: 40 HQIQQRFEELCSRLNMDEAARAEAWSSYRSMSESYTLEGNDLHWLACALYVACRK-SVPT 98
Query: 67 VNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSK 126
V S T EGN V LT +L+ + SL +F NK +KW DM LP FR + RLERNF VS
Sbjct: 99 V-SKGTAEGNYVSLTRILRCSEQSLIEFFNKMKKWEDMANLPPHFRERTERLERNFTVSA 157
Query: 127 VIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVS 186
VIF KY P+F+++FK P +E R K++ CT++++F F W+LF+ K + +S
Sbjct: 158 VIFKKYEPIFQDIFKYPQ-EEQPRQQRGRKQRRQPCTTSEIFHFCWVLFIYAKGNFPMIS 216
Query: 187 NDLVNSFHLLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISIL 245
+DLVNS+HLL+ DL+Y N +Q S +++VNP+F+G+ + DPPC+I L
Sbjct: 217 DDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDCHPKDSKASSDPPCVIEKL 276
Query: 246 CKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGC 305
C HDG L ++ I +H W P + + +
Sbjct: 277 CSLHDGLVL---------EAKGIKEHF------------W---KPYIRKLFE-------- 304
Query: 306 EQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
++ L+G E+L+ LEP NF +FK VNK YEEY+L+ G+ DER+FL
Sbjct: 305 KKLLKGKEENLTGFLEPGNFGESFKAVNKAYEEYVLAAGNLDERVFL 351
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW + SPLW I D+ +P CE+
Sbjct: 567 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKTKSPLWDRIRDNENRVPTCEE 618
>gi|397148|emb|CAA52671.1| Rb2/p130 protein [Homo sapiens]
Length = 1082
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 144/332 (43%), Positives = 199/332 (59%), Gaps = 36/332 (10%)
Query: 22 IDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTIEGNLVCLT 81
+D EAW++Y+ MS YTLEG+ LHWL C+LYV+CRK +VPTV S T+EGN V LT
Sbjct: 1 MDEAARAEAWDSYRSMSESYTLEGNDLHWLACALYVACRK-SVPTV-SKGTVEGNYVSLT 58
Query: 82 SLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLPMFKEMFK 141
+LK + SL +F NK +KW DM LP FR + RLERNF VS VIF KY P+F+++FK
Sbjct: 59 RILKCSEQSLIEFFNKMKKWEDMANLPPHFRERTERLERNFTVSAVIFKKYEPIFQDIFK 118
Query: 142 PPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCD 201
P +E R K++ CT +++F F W+LF+ K + +S+DLVNS+HLL+ D
Sbjct: 119 YPQ-EEQPRQQRGRKQRRQPCTVSEIFHFCWMLFIYAKGNFPMISDDLVNSYHLLLCALD 177
Query: 202 LIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGCKLCVIVRA 260
L+Y N +Q S +++VNP+F+G+ +F P DPPCII LC HDG L
Sbjct: 178 LVYGNALQCSNRKELVNPNFKGLSEDFHAKDSKPSSDPPCIIEKLCSLHDGLVL------ 231
Query: 261 EASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIEDLSAIL 320
++ I +H W P + + + ++ L+G E+L+ L
Sbjct: 232 ---EAKGIKEHF------------W---KPYIRKLYE--------KKLLKGKEENLTGFL 265
Query: 321 EPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
EP NF +FK +NK YEEY+LSVG+ DERIFL
Sbjct: 266 EPGNFGESFKAINKAYEEYVLSVGNLDERIFL 297
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW SPLW+ I D+ +P CE+
Sbjct: 513 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWEKIRDNENRVPTCEE 564
>gi|1045520|gb|AAB48991.1| retinoblastoma-related protein pRb2/p130 [Mus musculus]
Length = 1125
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 143/347 (41%), Positives = 204/347 (58%), Gaps = 36/347 (10%)
Query: 7 NETAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPT 66
++ + +ELC LN+D EAW++Y+ MS YTLEG+ LHWL C+LYV+CRK +VPT
Sbjct: 40 HQIQQRFEELCSRLNMDEAARAEAWSSYRSMSESYTLEGNDLHWLACALYVACRK-SVPT 98
Query: 67 VNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSK 126
V S T EGN V LT +L+ + SL +F NK +KW DM LP FR + RLERNF VS
Sbjct: 99 V-SKGTAEGNYVSLTRILRCSEQSLIEFFNKMKKWEDMANLPPHFRERTERLERNFTVSA 157
Query: 127 VIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVS 186
VIF KY P+F+++FK P +E R K++ CT++++F F W+LF+ K + +S
Sbjct: 158 VIFKKYEPIFQDIFKYPQ-EEQPRQQRGRKQRRQPCTTSEIFHFCWVLFIYAKGNFPMIS 216
Query: 187 NDLVNSFHLLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISIL 245
+DLVNS+HLL+ DL+Y N +Q S +++VNP+F+G+ + DPPC+I L
Sbjct: 217 DDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDCHPKDSKASSDPPCVIEKL 276
Query: 246 CKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGC 305
C HDG L ++ I +H W P + + +
Sbjct: 277 CSLHDGLVL---------EAKGIKEHF------------W---KPYIRKLFE-------- 304
Query: 306 EQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
++ L+G E+L+ LEP NF +FK VNK YEEY+L G+ DER+FL
Sbjct: 305 KKLLKGKEENLTGFLEPGNFGESFKAVNKAYEEYVLPAGNLDERVFL 351
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW + SPLW I D+ +P CE+
Sbjct: 557 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKTKSPLWDRIRDNENRVPTCEE 608
>gi|301615832|ref|XP_002937369.1| PREDICTED: retinoblastoma-like protein 2-like [Xenopus (Silurana)
tropicalis]
Length = 1089
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 143/343 (41%), Positives = 206/343 (60%), Gaps = 38/343 (11%)
Query: 12 QHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNR 71
++ ELC +LN+D EAW Y +S +YTLEG+ LHWL CSLYV+CR+ TVPTV
Sbjct: 21 RYDELCSSLNMDERARGEAWEYYSRISQNYTLEGNALHWLACSLYVACRQ-TVPTVGRG- 78
Query: 72 TIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTK 131
T+EGN V LT +L ++SL +F NK +KW DM LP FR++ +LERNF VS V+F K
Sbjct: 79 TVEGNYVSLTQILSSSELSLIEFFNKIKKWEDMANLPTEFRTRTKKLERNFTVSAVLFKK 138
Query: 132 YLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVN 191
Y P+F+E+F+ P L+E R K++ CT ++V++F W+LF+ TK + +S+DLVN
Sbjct: 139 YDPIFQEVFRSP-LEEQPRQHRGRKQRRQPCTVSEVYQFCWVLFIHTKGNFPMISDDLVN 197
Query: 192 SFHLLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHF-APLDDPPCIISILCKHH 249
S+HLL+ DL+Y N +Q R+++NP+F+G+P +F + APL + PCII LC H
Sbjct: 198 SYHLLLCALDLVYGNALQCPNRRELLNPNFQGLPEDFCSREYKAPL-EAPCIIETLCGLH 256
Query: 250 DGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKL 309
DG L EA + I +H W P + + D ++ L
Sbjct: 257 DGLVL------EA---KGIKEHF------------W---KPYIRKLFD--------KKIL 284
Query: 310 RGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+G + L L+P NF + K +NK YE Y+LS G+ DER+F+
Sbjct: 285 KGKSDSLVGFLDPGNFADSVKAINKAYEGYVLSAGNLDERVFM 327
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 45/71 (63%), Gaps = 11/71 (15%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIED 315
V+++AE L R++VKHLN EEQ+L+ +AW +SPLW I ++ +IP CE+
Sbjct: 541 VVIKAEEGLCREVVKHLNNIEEQILECMAWTHDSPLWDKIRENDGKIPLCEE-------- 592
Query: 316 LSAILEPENFD 326
+L P++F+
Sbjct: 593 ---VLHPQHFE 600
>gi|449472780|ref|XP_002190620.2| PREDICTED: retinoblastoma-like protein 2 [Taeniopygia guttata]
Length = 1200
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 144/342 (42%), Positives = 203/342 (59%), Gaps = 36/342 (10%)
Query: 12 QHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNR 71
+++ELC +LN+D EAW +Y+ M +YTLEG+ +HWL C+LYV+CRKA +PTV S
Sbjct: 107 RYEELCRSLNMDERARAEAWLSYQSMRRNYTLEGNDMHWLACALYVACRKA-IPTV-SRG 164
Query: 72 TIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTK 131
T EGN V LT +L+ SL +F NK +KW DM LP FR + RLERNF VS VIF K
Sbjct: 165 TAEGNYVSLTRILRCSDQSLIEFFNKMKKWEDMANLPSQFRERTERLERNFTVSAVIFKK 224
Query: 132 YLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVN 191
Y P+F+++F+ P D+ K++ CT T+VF+F W+LFV K + +S+DLVN
Sbjct: 225 YEPIFQDIFRYPQEDQPRQQR-GRKQRRQPCTVTEVFQFCWVLFVHAKGNFPMISDDLVN 283
Query: 192 SFHLLIATCDLIYANVIQSKLR-DIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHD 250
S+HLL+ DL+Y N +Q R +++NP+F+G+P +F + DPPCII LC H
Sbjct: 284 SYHLLLCALDLVYGNALQCPNRKELLNPNFKGLPEDFHSKDYKVSSDPPCIIEKLCSLHY 343
Query: 251 GCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLR 310
G L ++ I +H W P + + D ++ L+
Sbjct: 344 GLVL---------EAKGIKEHF------------W---KPYIRKLFD--------KKLLK 371
Query: 311 GNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
G E+L+ L+P NF + K +NK YEEY+LSVG+ DERIFL
Sbjct: 372 GKDENLTGFLDPGNFGDSVKAINKAYEEYVLSVGNLDERIFL 413
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 36/52 (69%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+L+S+AW S LW I ++ ++P CE+
Sbjct: 629 VFIRAEDGLCREVVKHLNHIEEQILESMAWKRESVLWDRIRENENKVPTCEE 680
>gi|432952925|ref|XP_004085246.1| PREDICTED: retinoblastoma-like protein 1-like, partial [Oryzias
latipes]
Length = 882
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 143/353 (40%), Positives = 201/353 (56%), Gaps = 35/353 (9%)
Query: 2 GQLADNETAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRK 61
G++ ++ + LC LN+D TA EA + + + + YTLEG +HWL CSLY +CRK
Sbjct: 12 GRMEESSVRRSLEVLCQELNMDEQTASEAMDNFTSIWNTYTLEGEVVHWLACSLYAACRK 71
Query: 62 ATVPTVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERN 121
+ PTV +EGN V LT +L+ K+SL QF +K RKWADM L FR ++ RLERN
Sbjct: 72 GSTPTVGKG-LMEGNCVSLTRILRCSKLSLIQFFSKMRKWADMSNLSQDFRLRMDRLERN 130
Query: 122 FAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAE 181
F VS VIF K+ P+F +MF+ P E R K + + C + VF+F W LFV TK
Sbjct: 131 FEVSTVIFRKFEPIFMDMFQNPQGSEPPRQPRSRKHRRLPCHISDVFKFCWTLFVYTKGN 190
Query: 182 YLDVSNDLVNSFHLLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNF-LDSHFAPLDDPP 239
+ + +DLVNS+HLL+ DL++ N + + +D++NP F G+P + D H P + PP
Sbjct: 191 FRMIGDDLVNSYHLLLCCLDLVFGNALLCANRKDLINPTFRGLPPQYRADCHVVPDEPPP 250
Query: 240 CIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSG 299
C++ LC+ HDG ++V A+ I +H Q L
Sbjct: 251 CVLERLCELHDG----LVVEAKG-----IRQHYFRPYIQKLFQ----------------- 284
Query: 300 QEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
Q LRGN E L+ +L+P+NF N K VN+ YEEY+L+VGDFDER+FL
Sbjct: 285 ------RQILRGNQELLTEMLDPQNFIDNNKAVNREYEEYVLTVGDFDERVFL 331
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 37/52 (71%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +R+E LSRD+VKHLN EEQVL+S AW +S LW ++ +G E+P E+
Sbjct: 538 VFIRSEEGLSRDMVKHLNSIEEQVLESRAWTEDSALWSALKAAGNEVPSVEE 589
>gi|426242350|ref|XP_004015036.1| PREDICTED: retinoblastoma-like protein 2 [Ovis aries]
Length = 1082
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 141/332 (42%), Positives = 197/332 (59%), Gaps = 36/332 (10%)
Query: 22 IDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTIEGNLVCLT 81
+D EAW +Y+ MS YTLEG+ LHWL C+LYV+CRK +VPTV S T+EGN V LT
Sbjct: 1 MDEAARAEAWESYRSMSESYTLEGNDLHWLACALYVACRK-SVPTV-SKGTVEGNYVSLT 58
Query: 82 SLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLPMFKEMFK 141
+L+ + SL +F NK +KW DM LP FR + RLERNF VS VIF KY P+F+++FK
Sbjct: 59 RILRCSEQSLIEFFNKMKKWEDMANLPPHFRERTERLERNFTVSAVIFKKYEPIFQDIFK 118
Query: 142 PPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCD 201
P +E R K++ CT ++VF F W+LF+ K + +S+DLVNS+HLL+ D
Sbjct: 119 YPQ-EEQPRQQRGRKQRRQPCTVSEVFHFCWVLFIYAKGNFPMISDDLVNSYHLLLCALD 177
Query: 202 LIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGCKLCVIVRA 260
L+Y N +Q S +++VNP+F+G+ +F P DPPC+I LC HDG L
Sbjct: 178 LVYGNALQCSNRKELVNPNFKGLSEDFHAKDSKPSSDPPCVIEKLCSLHDGLVL------ 231
Query: 261 EASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIEDLSAIL 320
++ I +H W P + + + ++ L+G E+L+ L
Sbjct: 232 ---EAKGIKEHF------------W---KPYIRKLYE--------KKLLKGKEENLTGFL 265
Query: 321 EPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
EP NF +FK ++K YEEY+LS G+ DERIFL
Sbjct: 266 EPGNFGESFKAISKAYEEYVLSAGNLDERIFL 297
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 35/52 (67%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW SPLW I D+ +P CE+
Sbjct: 513 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWDRIRDNENRVPTCEE 564
>gi|348541737|ref|XP_003458343.1| PREDICTED: retinoblastoma-like protein 2 [Oreochromis niloticus]
Length = 1188
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 144/364 (39%), Positives = 211/364 (57%), Gaps = 40/364 (10%)
Query: 6 DNETAHQH----QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRK 61
++ETA + +ELC ALN+D + EAW +Y+ +S ++TLEGS+LHWL C+LYV+CR
Sbjct: 109 EDETAQRARRGFEELCRALNMDEEASGEAWRSYENISRNFTLEGSELHWLACALYVACR- 167
Query: 62 ATVPTVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERN 121
++VPTV T EGN V LT +L+ +MSL +F +K +KW DM LP FR +LERN
Sbjct: 168 SSVPTVGKG-TAEGNYVSLTRILRCSEMSLIEFFSKMKKWQDMADLPPDFRQSTDKLERN 226
Query: 122 FAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAE 181
F VS VIF KY+P+FK +F+ P + +H R K++ CT T+VF F W+LFV K
Sbjct: 227 FIVSAVIFKKYVPIFKSIFRAPSEEPPRVH-RSRKQRRHPCTVTEVFNFCWVLFVHAKGN 285
Query: 182 YLDVSNDLVNSFHLLIATCDLIYANVIQSKLR-DIVNPDFEGMPSNFLDSHFAPLDDPPC 240
+ +S+DLVNS+HLL+ DL++ N + R D++NP+F+G+P +F F P P C
Sbjct: 286 FPMISDDLVNSYHLLLCALDLVFTNALLCNARKDLLNPEFKGLPEDFGTKDFRPASGPFC 345
Query: 241 IISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQ 300
+ LC+ HDG L EA + + +H W P K +
Sbjct: 346 FMEQLCRLHDGLVL------EA---KGVKEHF------------W---KPFIKKLFH--- 378
Query: 301 EIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFLPKFQSFDE 360
++ LRG + L+ L+P NF + ++++YEE++L+ G DERIF + S D
Sbjct: 379 -----KRILRGKEDSLTGFLDPMNFGDSLLALSRLYEEHVLATGSLDERIFTGEGASEDI 433
Query: 361 TAPG 364
PG
Sbjct: 434 GTPG 437
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 232 FAPLDDPPCIISI--LCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNS 289
+ P D P ++ I L +H + V+VRAE L R++VKHLN EEQVL+SLAW +S
Sbjct: 616 YRPPGDFPNVLGIFQLPAYHFYKVIEVLVRAEQGLFREVVKHLNQVEEQVLESLAWTGDS 675
Query: 290 PLWKNIEDSGQEIPGCEQ 307
PLW+++ + P C++
Sbjct: 676 PLWESLRGAKDHAPSCQE 693
>gi|260834765|ref|XP_002612380.1| hypothetical protein BRAFLDRAFT_218889 [Branchiostoma floridae]
gi|229297757|gb|EEN68389.1| hypothetical protein BRAFLDRAFT_218889 [Branchiostoma floridae]
Length = 1053
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 148/368 (40%), Positives = 209/368 (56%), Gaps = 44/368 (11%)
Query: 6 DNETA---HQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKA 62
D ET ++Q+LCM LN+D +EAW ++++MS +YTLEG LHWL C+LYV+CRK+
Sbjct: 5 DEETPSPEQRYQDLCMDLNMDKIATEEAWQSFEKMSTNYTLEGDDLHWLACALYVACRKS 64
Query: 63 TVPTVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNF 122
PTV T+EGN V LT LL+ K+SL QF NK +KWADM LP FR K+ RLERNF
Sbjct: 65 LTPTVGRG-TVEGNCVSLTRLLRSAKLSLIQFFNKMKKWADMASLPQDFRDKVDRLERNF 123
Query: 123 AVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEY 182
AVS VIF K+ P+F ++F+ P D+ R K++ + CTS+ VF F W LFV K +
Sbjct: 124 AVSTVIFKKFEPIFLDLFRNPG-DDQPRAPRGRKQRRLPCTSSDVFSFCWTLFVQVKGNF 182
Query: 183 LDVSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCII 242
+S+DLVNS+HLL+ DL + N + + +D++N +F +P F + + +PPCII
Sbjct: 183 PAISDDLVNSYHLLLCCLDLFFGNALCAGRKDLLNTEFPALPEGFTNRDWRSPSEPPCII 242
Query: 243 SILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEI 302
LC+ HDG L ++ I +H W P K + D
Sbjct: 243 DKLCELHDGLVL---------EAKGIKEHW------------W---KPYIKKLFDK---- 274
Query: 303 PGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFLPKFQSFDETA 362
+ L+ +L+ F+ N K +NK YEE++L+VGDFDERIFL + +
Sbjct: 275 -----------KTLTGLLDLATFEINNKSINKEYEEWVLTVGDFDERIFLGEDADVEIGT 323
Query: 363 PGSSGPGL 370
P P +
Sbjct: 324 PAKPAPNI 331
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 239 PCIISI--LCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P II + L +H + V++RAE LSRD+VKHLN EEQ+L+SLAW S SPLW+ ++
Sbjct: 511 PWIIDVFGLSPYHFYKVIEVLIRAEDGLSRDVVKHLNFIEEQILESLAWKSESPLWEAMK 570
Query: 297 DSGQEIPGCEQ 307
+ +P CE+
Sbjct: 571 MNENAVPSCEE 581
>gi|332227839|ref|XP_003263100.1| PREDICTED: retinoblastoma-like protein 2 [Nomascus leucogenys]
Length = 1082
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 143/332 (43%), Positives = 197/332 (59%), Gaps = 36/332 (10%)
Query: 22 IDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTIEGNLVCLT 81
+D EAW++Y+ MS YTLEG+ LHWL C+LYV+CRK +VPTV S T EGN V LT
Sbjct: 1 MDEAARAEAWDSYRSMSESYTLEGNDLHWLACALYVACRK-SVPTV-SKGTAEGNYVSLT 58
Query: 82 SLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLPMFKEMFK 141
+LK + SL +F NK +KW DM LP FR + RLERNF VS VIF KY P+F+++FK
Sbjct: 59 RILKCSEQSLIEFFNKMKKWEDMANLPPHFRERTERLERNFTVSAVIFKKYEPIFQDIFK 118
Query: 142 PPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCD 201
P +E R K++ CT +++F F W+LF+ K + +S+DLVNS+HLL+ D
Sbjct: 119 HPQ-EEQPRQQRGRKQRRQPCTVSEIFHFCWVLFIYAKGNFPMISDDLVNSYHLLLCALD 177
Query: 202 LIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGCKLCVIVRA 260
L+Y N +Q S +++VNP+F+G+ +F P D PCII LC HDG L
Sbjct: 178 LVYGNALQCSNRKELVNPNFKGLSEDFHAKDSKPSSDAPCIIEKLCSLHDGLVL------ 231
Query: 261 EASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIEDLSAIL 320
++ I +H W P + + + ++ L+G E+L+ L
Sbjct: 232 ---EAKGIKEHF------------W---KPYIRKLYE--------KKLLKGKEENLTGFL 265
Query: 321 EPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
EP NF +FK +NK YEEY+LSVG+ DERIFL
Sbjct: 266 EPGNFGESFKAINKAYEEYVLSVGNLDERIFL 297
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW SPLW+ I D+ +P CE+
Sbjct: 513 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWEKIRDNENRVPTCEE 564
>gi|326680423|ref|XP_002667000.2| PREDICTED: retinoblastoma-like protein 2 [Danio rerio]
Length = 1087
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/359 (40%), Positives = 206/359 (57%), Gaps = 36/359 (10%)
Query: 7 NETAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPT 66
+T H +ELC LN+D ++ AW +Y+ +S +YTLEGS+LHWL CSLYV+CR ++VPT
Sbjct: 9 GKTKHAFEELCRDLNMDEESSNRAWRSYENISKNYTLEGSELHWLACSLYVACR-SSVPT 67
Query: 67 VNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSK 126
+ S T EGN V LT +L+ + SL +F +K +KW DM LP F+ +LERNF V+
Sbjct: 68 M-SKGTAEGNYVSLTRILRSSQQSLIEFFSKMKKWQDMANLPRDFQQSTEKLERNFTVTS 126
Query: 127 VIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVS 186
VIF KYLP+F+++FK P DEL R K++ CT T+VF F WILF+ K + +S
Sbjct: 127 VIFKKYLPLFRDIFKTP-TDELPRTHRGRKQRRHPCTVTEVFNFCWILFIHAKGNFPMIS 185
Query: 187 NDLVNSFHLLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISIL 245
+DLVNS+HLL+ DL+Y N + S +D++NP F+G+P +F + P C I L
Sbjct: 186 DDLVNSYHLLLCALDLVYCNALLCSSRKDLLNPAFKGLPEDFNSKDYKPGPGSLCFIEQL 245
Query: 246 CKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGC 305
C+ HDG L EA +++ H W P K + +
Sbjct: 246 CELHDGLVL------EAKGAKE---HF------------W---KPFIKKLFE-------- 273
Query: 306 EQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFLPKFQSFDETAPG 364
+ L+G + L+ LEP NF + +N++YEE++LS G DERIFL D PG
Sbjct: 274 RKILKGKEDTLTGFLEPVNFGDSLASLNRVYEEHVLSSGSLDERIFLGDGAREDIGTPG 332
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 232 FAPLDDPPCIISI--LCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNS 289
+ P + P ++ I L +H + V+VRAE L R++VKHLN EEQVL+SLAW NS
Sbjct: 511 YRPPGEFPRVLQIFDLPAYHFYKVIEVLVRAEEGLFREVVKHLNHVEEQVLESLAWKGNS 570
Query: 290 PLWKNIEDSGQEIPGCEQ 307
PLW+ I ++ +P C++
Sbjct: 571 PLWERIREAKNCVPTCQE 588
>gi|410953874|ref|XP_003983593.1| PREDICTED: LOW QUALITY PROTEIN: retinoblastoma-like protein 1
[Felis catus]
Length = 1068
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 144/340 (42%), Positives = 201/340 (59%), Gaps = 40/340 (11%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
Q LC LN+D +A EA + + + +Y+LEG +HWL CSLYV+CRK+ +PTV +
Sbjct: 22 QALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVIHWLACSLYVACRKSIIPTVGKG-IM 80
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
EGN V LT +L+ K+SL QF NK +KW DM LP FR +I RLERNF VS VIF K+
Sbjct: 81 EGNCVSLTRILRSAKLSLIQFFNKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFKKFE 140
Query: 134 PMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSF 193
P+F ++F+ P +EL R K++ I C+ +F F W LFV TK + + +DLVNS+
Sbjct: 141 PIFLDIFQNP-YEELPRLPRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVNSY 199
Query: 194 HLLIATCDLIYAN-VIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGC 252
HLL+ DLI+AN +I RD++NP F+G+PS+F + F ++PPCII++LC+ HDG
Sbjct: 200 HLLLCCLDLIFANAIICPNRRDLLNPSFKGLPSDFHTADFRASEEPPCIIAVLCELHDG- 258
Query: 253 KLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGN 312
++V A+ I +H P + D + L+G
Sbjct: 259 ---LLVEAKG-----IKEHY---------------FKPYISKLFD--------RKILKGE 287
Query: 313 IEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+L+ +F N K VNK YEEY+L+VGDFDERIFL
Sbjct: 288 -----CLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFL 322
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 41/52 (78%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++R+E LSRD+VKHLN EEQ+L+SLAW +S LW+ ++ SG ++P CE+
Sbjct: 539 VVIRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQASGNKVPTCEE 590
>gi|300797136|ref|NP_001177995.1| retinoblastoma-like protein 1 [Rattus norvegicus]
Length = 1049
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 200/340 (58%), Gaps = 40/340 (11%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
Q LC LN+D +A EA + + + +Y+LEG +HWL CSLYV+CRK+ +PTV +
Sbjct: 22 QALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVIHWLACSLYVACRKSIIPTVGKG-VM 80
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
EGN V LT +L+ K+SL QF +K +KW DM LP FR +I RLERNF VS VIF K+
Sbjct: 81 EGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFKKFE 140
Query: 134 PMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSF 193
P+F ++F+ P +EL R K++ I C+ +F F W LFV TK + + +DLVNS+
Sbjct: 141 PIFLDIFQNP-YEELPKLPRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVNSY 199
Query: 194 HLLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGC 252
HLL+ DLI+AN I RD++NP F+G+PS+F +F ++PPCII++LC HDG
Sbjct: 200 HLLLCCLDLIFANAIMCPNRRDLLNPSFKGLPSDFHAVNFKAAEEPPCIIAVLCDLHDG- 258
Query: 253 KLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGN 312
++V A + I +H P + D ++ L+G
Sbjct: 259 ---LLVEA-----KGIKEHY---------------FKPYISKLFD--------KKILKGE 287
Query: 313 IEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+L+ +F N K VNK YEEY+L+VGDFDERIFL
Sbjct: 288 -----CLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFL 322
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 40/52 (76%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++R+E LSRD+VKHLN EEQ+L+SLAW +NS LW+ + S ++P CE+
Sbjct: 539 VVIRSEEGLSRDMVKHLNSIEEQILESLAWTNNSALWEALRASANKVPSCEE 590
>gi|348528825|ref|XP_003451916.1| PREDICTED: retinoblastoma-like protein 1 [Oreochromis niloticus]
Length = 1064
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 138/341 (40%), Positives = 199/341 (58%), Gaps = 35/341 (10%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
+ LC LN+D TA EA + + + + YTLEG +HWL CSLY +CRK + PTV +
Sbjct: 24 ETLCQELNMDEQTATEAMDNFTAIWNTYTLEGDVVHWLACSLYAACRKGSTPTVGKG-LM 82
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
EGN V LT +L+ K+SL QF +K RKWADM KL FR ++ RLERNF VS VIF K+
Sbjct: 83 EGNCVSLTRILRSSKLSLIQFFSKMRKWADMSKLSQDFRLRMERLERNFEVSTVIFRKFE 142
Query: 134 PMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSF 193
P+F +MF+ P + R K + + C + VF+F W LFV TK + + +DLVNS+
Sbjct: 143 PIFMDMFQNPQGTDPPRQPRSRKHRRLPCHISDVFKFCWTLFVYTKGNFRMIGDDLVNSY 202
Query: 194 HLLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNF-LDSHFAPLDDPPCIISILCKHHDG 251
HLL+ DL++ N + + +D++NP F G+P+ + D H + + PPC++ LC+ HDG
Sbjct: 203 HLLLCCLDLVFGNALLCANRKDLINPTFRGLPAAYRADGHISSDEPPPCVLERLCELHDG 262
Query: 252 CKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRG 311
++V A+ I +H Q L +Q L+G
Sbjct: 263 ----LVVEAKG-----IKQHYFKPYIQKLFQ-----------------------KQILKG 290
Query: 312 NIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+ E L+ +L+P+NF N K +N+ YEEY+L+VGDFDER+FL
Sbjct: 291 HDELLTELLDPQNFIDNNKAINREYEEYVLTVGDFDERVFL 331
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 39/52 (75%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +R+E LSRD+VKHLN EEQVL+S AW ++S LW+ ++ +G ++P E+
Sbjct: 539 VFIRSEEGLSRDMVKHLNSIEEQVLESRAWTADSALWRALQAAGNKVPTVEE 590
>gi|194224386|ref|XP_001499565.2| PREDICTED: retinoblastoma-like protein 1 [Equus caballus]
Length = 1068
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 200/340 (58%), Gaps = 40/340 (11%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
Q LC LN+D +A EA + + + Y+LEG +HWL CSLYV+CRK+ +PTV +
Sbjct: 22 QALCQELNLDEGSAAEALDDFAAIRGKYSLEGEVIHWLACSLYVACRKSIIPTVGKG-IM 80
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
EGN V LT +L+ K+SL QF NK +KW DM +P FR +I RLERNF VS VIF K+
Sbjct: 81 EGNCVSLTRILRSAKLSLIQFFNKMKKWMDMSNMPQEFRERIERLERNFEVSTVIFKKFE 140
Query: 134 PMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSF 193
P+F ++F+ P +E R K++ I C+ +F F W LFV TK + + +DLVNS+
Sbjct: 141 PIFLDIFQNP-YEEPPKLPRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVNSY 199
Query: 194 HLLIATCDLIYAN-VIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGC 252
HLL+ DLI+AN +I RD++NP F+G+PS+F + F ++PPCIIS+LC+ HDG
Sbjct: 200 HLLLCCLDLIFANAIICPNRRDLLNPSFKGLPSDFHTADFRASEEPPCIISVLCELHDG- 258
Query: 253 KLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGN 312
++V A+ I +H P + D + L+G+
Sbjct: 259 ---LLVEAKG-----IKEHY---------------FKPYISKLFD--------RKILKGD 287
Query: 313 IEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+L+ +F N K VNK YEEY+L+VGDFDERIFL
Sbjct: 288 -----CLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFL 322
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 40/52 (76%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++R+E LSRD+VKHLN EEQ+L+SLAW NS LW+ ++ S ++P CE+
Sbjct: 539 VVIRSEEGLSRDMVKHLNGVEEQILESLAWSHNSALWEALQASANKVPTCEE 590
>gi|395829401|ref|XP_003787848.1| PREDICTED: retinoblastoma-like protein 1, partial [Otolemur
garnettii]
Length = 864
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 201/340 (59%), Gaps = 40/340 (11%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
Q LC LN+D +A EA + + + +Y+LEG +HWL CSLYV+CRK+ +PTV +
Sbjct: 22 QALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVIHWLACSLYVACRKSIIPTVGKG-IM 80
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
EGN V LT +L+ K+SL QF +K +KW DM LP FR +I RLERNF VS VIF K++
Sbjct: 81 EGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFKKFV 140
Query: 134 PMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSF 193
P+F ++F+ P +E R K++ I CT +F F W LFV TK + + +DLVNS+
Sbjct: 141 PIFLDIFQNP-YEEPTKLPRSRKQRRIPCTVKDLFNFCWTLFVYTKGNFRMIGDDLVNSY 199
Query: 194 HLLIATCDLIYANVIQSKLR-DIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGC 252
HLL+ DLI+AN I R D++NP F+G+PS+F + F ++PPCII++LC+ HDG
Sbjct: 200 HLLLCCLDLIFANAIMCPNRQDLLNPSFKGLPSDFNTADFKASEEPPCIIAVLCELHDG- 258
Query: 253 KLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGN 312
++V A + I +H P + D ++ L+G
Sbjct: 259 ---LLVEA-----KGIKEHY---------------FKPYISKLFD--------KKILKGE 287
Query: 313 IEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+L+ +F N K VNK YEEY+L+VGDFDERIFL
Sbjct: 288 -----CLLDLSSFADNSKAVNKEYEEYVLTVGDFDERIFL 322
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 48/70 (68%), Gaps = 3/70 (4%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIED 315
V++R+E LSRD+VKHLN EEQ+L+SLAW +S LW+ ++ S ++P CE+ N++
Sbjct: 539 VVIRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQASTNKVPTCEEV---NMQP 595
Query: 316 LSAILEPENF 325
LS I E +
Sbjct: 596 LSPISVHERY 605
>gi|354469450|ref|XP_003497142.1| PREDICTED: retinoblastoma-like protein 1 [Cricetulus griseus]
Length = 1063
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 198/340 (58%), Gaps = 40/340 (11%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
Q LC LN+D +A EA + + + +Y+LEG +HWL CSLYV+CRK+ +PTV +
Sbjct: 22 QALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVIHWLACSLYVACRKSIIPTVGKG-VM 80
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
EGN V LT +L+ K+SL QF +K +KW DM LP FR +I RLERNF VS VIF K+
Sbjct: 81 EGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRDRIERLERNFEVSTVIFKKFE 140
Query: 134 PMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSF 193
P+F ++F+ P +EL R K++ I C+ +F F W LFV TK + + +DLVNS+
Sbjct: 141 PIFLDIFQNP-YEELPKLPRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVNSY 199
Query: 194 HLLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGC 252
HLL+ DLI+AN I RD++NP F+G+PS+F F +PPCII++LC HDG
Sbjct: 200 HLLLCCLDLIFANAIMCPNRRDLLNPSFKGLPSDFHAPDFKAAQEPPCIIAVLCDLHDG- 258
Query: 253 KLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGN 312
++V A+ I +H P + D ++ L+G
Sbjct: 259 ---LLVEAKG-----IKEHY---------------FKPYISKLFD--------KKILKGE 287
Query: 313 IEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+L+ +F N K VNK YEEY+L+VGDFDERIFL
Sbjct: 288 -----CLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFL 322
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 40/52 (76%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++R+E LSRD+VKHLN EEQ+L+SLAW SNS LW+ + S ++P CE+
Sbjct: 539 VVIRSEEGLSRDMVKHLNSIEEQILESLAWSSNSALWEALHASVNKVPTCEE 590
>gi|351702519|gb|EHB05438.1| Retinoblastoma-like protein 1 [Heterocephalus glaber]
Length = 1066
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 138/340 (40%), Positives = 196/340 (57%), Gaps = 40/340 (11%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
Q LC LN+D +A EA + + + +Y+LEG +HWL CSLYV+CRK+ +PTV +
Sbjct: 22 QALCQELNLDEESAAEALDDFTAIRGNYSLEGEVIHWLACSLYVACRKSIIPTVGRG-IM 80
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
EGN V LT +L+ K+SL QF +K +KW DM LP FR +I RLERNF VS VIF K+
Sbjct: 81 EGNCVSLTRILRSAKLSLIQFFSKMKKWMDMLNLPQEFRERIERLERNFEVSTVIFKKFE 140
Query: 134 PMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSF 193
P+F ++F+ P +EL R K++ I C+ +F F W LFV TK + + +DLVNS+
Sbjct: 141 PIFLDIFQNP-FEELPKLPRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVNSY 199
Query: 194 HLLIATCDLIYANVIQSKLR-DIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGC 252
HLL+ DL++AN I R D++NP F+G+PS+F + F ++PPCII+ILC+ HDG
Sbjct: 200 HLLLCCLDLVFANAIMCPNRQDLLNPSFKGLPSDFHTADFRASEEPPCIIAILCELHDGL 259
Query: 253 KLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGN 312
+++ + E +A + + + K
Sbjct: 260 ---------------LIEAKGIKEHYFKPYIAKLFDRKVLKG------------------ 286
Query: 313 IEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+L+ +F N K VNK YEEY+L+VGDFDERIFL
Sbjct: 287 ----ECLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFL 322
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 40/52 (76%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++R+E LSRD+VKHLN EEQ+L+SLAW NS LW+ + SG +IP CE+
Sbjct: 539 VVIRSEEGLSRDMVKHLNSIEEQILESLAWSHNSALWEALLASGNKIPTCEE 590
>gi|431894364|gb|ELK04164.1| Retinoblastoma-like protein 1 [Pteropus alecto]
Length = 1053
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 141/340 (41%), Positives = 200/340 (58%), Gaps = 39/340 (11%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
Q LC LN+D +A EA + + + Y+LEG +HWL CSLYV+CRK+ +PTV +
Sbjct: 22 QALCQELNLDEGSAAEALDDFTAIRGTYSLEGEVIHWLACSLYVACRKSIIPTVGKG-IM 80
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
EGN V LT +L+ K+SL QF +K +KW DM LP FR +I RLERNF VS VIF K+
Sbjct: 81 EGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFKKFQ 140
Query: 134 PMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSF 193
P+F ++F+ P + + R K++ C+ ++F F W LFV TK + + +DLVNS+
Sbjct: 141 PIFLDIFQNPYEEPSKLFPRSRKQRRSPCSVKELFNFCWTLFVYTKGNFRMIGDDLVNSY 200
Query: 194 HLLIATCDLIYAN-VIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGC 252
HLL+ DLI+AN +I RD++NP F+G+PS+F ++ F ++PPCII+ILC+ HDG
Sbjct: 201 HLLLCCLDLIFANAIICPNRRDLLNPSFKGLPSDFPNADFRAPEEPPCIIAILCELHDG- 259
Query: 253 KLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGN 312
++V A+ I +H P + D + L+G
Sbjct: 260 ---LLVEAKG-----IKEHY---------------FKPYISKLFD--------RKILKGE 288
Query: 313 IEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+L+ +F N K VNK YEEY+L+VGDFDERIFL
Sbjct: 289 -----CLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFL 323
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 40/52 (76%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++R+E LSRD+VKHLN EEQ+L+SLAW +S LW+ ++ S ++P CE+
Sbjct: 527 VVIRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQTSANKVPTCEE 578
>gi|297259874|ref|XP_002798195.1| PREDICTED: retinoblastoma-like protein 1-like [Macaca mulatta]
Length = 1031
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 199/340 (58%), Gaps = 40/340 (11%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
Q LC LN+D +A EA + + + +Y+LEG HWL CSLYV+CRK+ +PTV +
Sbjct: 22 QALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVTHWLACSLYVACRKSIIPTVGKG-IM 80
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
EGN V LT +L+ K+SL QF +K +KW DM LP FR +I RLERNF VS VIF KY
Sbjct: 81 EGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFKKYE 140
Query: 134 PMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSF 193
P+F ++F+ P +E +R K++ I C+ +F F W LFV TK + + +DLVNS+
Sbjct: 141 PIFLDIFQNP-YEEPPKLLRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVNSY 199
Query: 194 HLLIATCDLIYANVIQSKLR-DIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGC 252
HLL+ DLI+AN I R D++NP F+G+PS+F + F ++PPCII++LC+ HDG
Sbjct: 200 HLLLCCLDLIFANAIMCPNRQDLLNPSFKGLPSDFHTADFRASEEPPCIIAVLCELHDG- 258
Query: 253 KLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGN 312
++V A + I +H P + D + L+G
Sbjct: 259 ---LLVEA-----KGIKEHY---------------FKPYISKLFD--------RKILKGE 287
Query: 313 IEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+L+ +F N K VNK YEEY+L+VGDFDERIFL
Sbjct: 288 -----CLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFL 322
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 40/52 (76%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++R+E LSRD+VK+LN EEQ+L+SLAW +S LW+ ++ S ++P CE+
Sbjct: 512 VVIRSEEGLSRDMVKYLNSIEEQILESLAWSHDSALWEALQVSANKVPTCEE 563
>gi|390462299|ref|XP_002747257.2| PREDICTED: retinoblastoma-like protein 1 [Callithrix jacchus]
Length = 1131
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 144/345 (41%), Positives = 198/345 (57%), Gaps = 51/345 (14%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
Q LC LN+D +A EA + + + +Y+LEG HWL CSLYV+CRK+ +PTV +
Sbjct: 22 QALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVTHWLACSLYVACRKSVIPTVGKG-IM 80
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
EGN V LT +L+ K+SL QF +K +KW DM LP FR +I RLERNF VS VIF K+
Sbjct: 81 EGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFKKFQ 140
Query: 134 PMFKEMF-----KPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSND 188
P+F ++F KPP L R K++ I C+ +F F W LFV TK + + +D
Sbjct: 141 PIFLDIFQNPYEKPPKL-------RSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDD 193
Query: 189 LVNSFHLLIATCDLIYANVIQSKLR-DIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCK 247
LVNS+HLL+ DLI+AN I R D++NP F+G+PS+F + F ++PPCII++LC+
Sbjct: 194 LVNSYHLLLCCLDLIFANAIMCPNRQDLLNPSFKGLPSDFHSADFRASEEPPCIIAVLCE 253
Query: 248 HHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
HDG ++V A+ I +H P + D +
Sbjct: 254 LHDG----LLVEAKG-----IKEHY---------------FKPYISKLFD--------RK 281
Query: 308 KLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
L+G +L+ +F N K VNK YEEY+L+VGDFDERIFL
Sbjct: 282 ILKGE-----CLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFL 321
>gi|383420481|gb|AFH33454.1| retinoblastoma-like protein 1 isoform a [Macaca mulatta]
Length = 1067
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 199/340 (58%), Gaps = 40/340 (11%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
Q LC LN+D +A EA + + + +Y+LEG HWL CSLYV+CRK+ +PTV +
Sbjct: 22 QALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVTHWLACSLYVACRKSIIPTVGKG-IM 80
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
EGN V LT +L+ K+SL QF +K +KW DM LP FR +I RLERNF VS VIF KY
Sbjct: 81 EGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFKKYE 140
Query: 134 PMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSF 193
P+F ++F+ P +E +R K++ I C+ +F F W LFV TK + + +DLVNS+
Sbjct: 141 PIFLDIFQNP-YEEPPKLLRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVNSY 199
Query: 194 HLLIATCDLIYANVIQSKLR-DIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGC 252
HLL+ DLI+AN I R D++NP F+G+PS+F + F ++PPCII++LC+ HDG
Sbjct: 200 HLLLCCLDLIFANAIMCPNRQDLLNPSFKGLPSDFHTADFRASEEPPCIIAVLCELHDG- 258
Query: 253 KLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGN 312
++V A+ I +H P + D + L+G
Sbjct: 259 ---LLVEAKG-----IKEHY---------------FKPYISKLFD--------RKILKGE 287
Query: 313 IEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+L+ +F N K VNK YEEY+L+VGDFDERIFL
Sbjct: 288 -----CLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFL 322
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 40/52 (76%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++R+E LSRD+VKHLN EEQ+L+SLAW +S LW+ ++ S ++P CE+
Sbjct: 539 VVIRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQVSANKVPTCEE 590
>gi|73992372|ref|XP_534412.2| PREDICTED: retinoblastoma-like protein 1 [Canis lupus familiaris]
Length = 1068
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 141/340 (41%), Positives = 200/340 (58%), Gaps = 40/340 (11%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
Q LC LN+D +A EA + + + +Y+LEG +HWL CSLYV+CRK+ +PTV +
Sbjct: 22 QALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVIHWLACSLYVACRKSIIPTVGKG-IM 80
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
EGN V LT +L+ K+SL QF +K +KW DM LP FR ++ RLERNF VS VIF K+
Sbjct: 81 EGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRERVERLERNFEVSTVIFKKFE 140
Query: 134 PMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSF 193
P+F ++F+ P +E R K++ I C+ +F F W LFV TK + + +DLVNS+
Sbjct: 141 PIFLDIFQNP-YEEQPKFPRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVNSY 199
Query: 194 HLLIATCDLIYAN-VIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGC 252
HLL+ DLI+AN +I RD++NP F+G+PS+F + F ++PPCII++LC+ HDG
Sbjct: 200 HLLLCCLDLIFANAIICPNRRDLLNPTFKGLPSDFHTADFKASEEPPCIIAVLCELHDG- 258
Query: 253 KLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGN 312
++V A+ I +H P + D + L+G
Sbjct: 259 ---LLVEAKG-----IKEHY---------------FKPYISKLFD--------RKVLKGE 287
Query: 313 IEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+L+ +F N K VNK YEEY+L+VGDFDERIFL
Sbjct: 288 -----CLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFL 322
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 40/52 (76%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++R+E LSRD+VKHLN EEQ+L+SLAW +S LW+ ++ S ++P CE+
Sbjct: 539 VVIRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQASANKVPTCEE 590
>gi|74151037|dbj|BAE27648.1| unnamed protein product [Mus musculus]
Length = 817
Score = 254 bits (649), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 198/340 (58%), Gaps = 40/340 (11%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
Q LC LN+D +A EA + + + +Y+LEG +HWL CSLYV+CRK+ +PTV +
Sbjct: 22 QALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVIHWLACSLYVACRKSIIPTVGKG-VM 80
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
EGN V LT +L+ K+SL QF +K +KW DM LP FR +I RLERNF VS VIF K+
Sbjct: 81 EGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFKKFE 140
Query: 134 PMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSF 193
P+F ++F+ P +E R K++ I C+ +F F W LFV TK + + +DLVNS+
Sbjct: 141 PIFLDIFQNP-YEEPPKLPRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVNSY 199
Query: 194 HLLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGC 252
HLL+ DLI+AN I RD++NP F+G+PS+F F ++PPCII++LC HDG
Sbjct: 200 HLLLCCLDLIFANAIMCPNRRDLLNPSFKGLPSDFHAPDFKAAEEPPCIIAVLCDLHDG- 258
Query: 253 KLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGN 312
++V A + I +H P + D ++ L+G
Sbjct: 259 ---LLVEA-----KGIKEHY---------------FKPYISKLFD--------KKILKGE 287
Query: 313 IEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+L+ +F N K VNK YEEY+L+VGDFDERIFL
Sbjct: 288 -----CLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFL 322
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 41/57 (71%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGN 312
V++R+E LSRD+VKHLN EEQ+L+SLAW +NS LW+ + S +P CE+ + N
Sbjct: 539 VVIRSEEGLSRDMVKHLNSIEEQILESLAWTNNSALWEALHASANRVPSCEEVIFPN 595
>gi|1871225|gb|AAB53235.1| p107 [Mus musculus]
Length = 1063
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 198/340 (58%), Gaps = 40/340 (11%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
Q LC LN+D +A EA + + + +Y+LEG +HWL CSLYV+CRK+ +PTV +
Sbjct: 22 QALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVIHWLACSLYVACRKSIIPTVGKG-VM 80
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
EGN V LT +L+ K+SL QF +K +KW DM LP FR +I RLERNF VS VIF K+
Sbjct: 81 EGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFKKFE 140
Query: 134 PMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSF 193
P+F ++F+ P +E R K++ I C+ +F F W LFV TK + + +DLVNS+
Sbjct: 141 PIFLDIFQNP-YEEPPKLPRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVNSY 199
Query: 194 HLLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGC 252
HLL+ DLI+AN I RD++NP F+G+PS+F F ++PPCII++LC HDG
Sbjct: 200 HLLLCCLDLIFANAIMCPNRRDLLNPSFKGLPSDFHAPDFKAAEEPPCIIAVLCDLHDG- 258
Query: 253 KLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGN 312
++V A+ I +H P + D ++ L+G
Sbjct: 259 ---LLVEAKG-----IKEHY---------------FKPYISKLFD--------KKILKGE 287
Query: 313 IEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+L+ +F N K VNK YEEY+L+VGDFDERIFL
Sbjct: 288 -----CLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFL 322
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++R+E LSRD+VKHLN EEQ+L+SLAW +NS LW+ + S +P CE+
Sbjct: 539 VVIRSEEGLSRDMVKHLNSIEEQILESLAWTNNSALWEALHASANRVPSCEE 590
>gi|34577079|ref|NP_002886.2| retinoblastoma-like protein 1 isoform a [Homo sapiens]
gi|90103515|sp|P28749.3|RBL1_HUMAN RecName: Full=Retinoblastoma-like protein 1; AltName: Full=107 kDa
retinoblastoma-associated protein; Short=p107; AltName:
Full=pRb1
gi|119596494|gb|EAW76088.1| retinoblastoma-like 1 (p107), isoform CRA_a [Homo sapiens]
gi|158261783|dbj|BAF83069.1| unnamed protein product [Homo sapiens]
gi|168277456|dbj|BAG10706.1| retinoblastoma-like protein 1 [synthetic construct]
Length = 1068
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 198/340 (58%), Gaps = 40/340 (11%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
Q LC LN+D +A EA + + + +Y+LEG HWL CSLYV+CRK+ +PTV +
Sbjct: 22 QALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVTHWLACSLYVACRKSIIPTVGKG-IM 80
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
EGN V LT +L+ K+SL QF +K +KW DM LP FR +I RLERNF VS VIF KY
Sbjct: 81 EGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFKKYE 140
Query: 134 PMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSF 193
P+F ++F+ P +E R K++ I C+ +F F W LFV TK + + +DLVNS+
Sbjct: 141 PIFLDIFQNP-YEEPPKLPRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVNSY 199
Query: 194 HLLIATCDLIYANVIQSKLR-DIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGC 252
HLL+ DLI+AN I R D++NP F+G+PS+F + F ++PPCII++LC+ HDG
Sbjct: 200 HLLLCCLDLIFANAIMCPNRQDLLNPSFKGLPSDFHTADFTASEEPPCIIAVLCELHDG- 258
Query: 253 KLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGN 312
++V A+ I +H P + D + L+G
Sbjct: 259 ---LLVEAKG-----IKEHY---------------FKPYISKLFD--------RKILKGE 287
Query: 313 IEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+L+ +F N K VNK YEEY+L+VGDFDERIFL
Sbjct: 288 -----CLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFL 322
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 40/52 (76%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++R+E LSRD+VKHLN EEQ+L+SLAW +S LW+ ++ S ++P CE+
Sbjct: 539 VVIRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQVSANKVPTCEE 590
>gi|37994624|gb|AAH60124.1| Retinoblastoma-like 1 (p107) [Mus musculus]
Length = 1063
Score = 254 bits (648), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 198/340 (58%), Gaps = 40/340 (11%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
Q LC LN+D +A EA + + + +Y+LEG +HWL CSLYV+CRK+ +PTV +
Sbjct: 22 QALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVIHWLACSLYVACRKSIIPTVGKG-VM 80
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
EGN V LT +L+ K+SL QF +K +KW DM LP FR +I RLERNF VS VIF K+
Sbjct: 81 EGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFKKFE 140
Query: 134 PMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSF 193
P+F ++F+ P +E R K++ I C+ +F F W LFV TK + + +DLVNS+
Sbjct: 141 PIFLDIFQNP-YEEPPKLPRSRKQRRIPCSVRDLFNFCWTLFVYTKGNFRMIGDDLVNSY 199
Query: 194 HLLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGC 252
HLL+ DLI+AN I RD++NP F+G+PS+F F ++PPCII++LC HDG
Sbjct: 200 HLLLCCLDLIFANAIMCPNRRDLLNPSFKGLPSDFHAPDFKAAEEPPCIIAVLCDLHDG- 258
Query: 253 KLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGN 312
++V A+ I +H P + D ++ L+G
Sbjct: 259 ---LLVEAKG-----IKEHY---------------FKPYISKLFD--------KKILKGE 287
Query: 313 IEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+L+ +F N K VNK YEEY+L+VGDFDERIFL
Sbjct: 288 -----CLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFL 322
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++R+E LSRD+VKHLN EEQ+L+SLAW +NS LW+ + S +P CE+
Sbjct: 539 VVIRSEEGLSRDMVKHLNSIEEQILESLAWTNNSALWEALHASANRVPPCEE 590
>gi|213417847|ref|NP_035379.2| retinoblastoma-like protein 1 isoform 1 [Mus musculus]
gi|341942164|sp|Q64701.3|RBL1_MOUSE RecName: Full=Retinoblastoma-like protein 1; AltName: Full=107 kDa
retinoblastoma-associated protein; Short=p107; AltName:
Full=pRb1
gi|74217646|dbj|BAE33564.1| unnamed protein product [Mus musculus]
Length = 1063
Score = 254 bits (648), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 198/340 (58%), Gaps = 40/340 (11%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
Q LC LN+D +A EA + + + +Y+LEG +HWL CSLYV+CRK+ +PTV +
Sbjct: 22 QALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVIHWLACSLYVACRKSIIPTVGKG-VM 80
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
EGN V LT +L+ K+SL QF +K +KW DM LP FR +I RLERNF VS VIF K+
Sbjct: 81 EGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFKKFE 140
Query: 134 PMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSF 193
P+F ++F+ P +E R K++ I C+ +F F W LFV TK + + +DLVNS+
Sbjct: 141 PIFLDIFQNP-YEEPPKLPRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVNSY 199
Query: 194 HLLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGC 252
HLL+ DLI+AN I RD++NP F+G+PS+F F ++PPCII++LC HDG
Sbjct: 200 HLLLCCLDLIFANAIMCPNRRDLLNPSFKGLPSDFHAPDFKAAEEPPCIIAVLCDLHDG- 258
Query: 253 KLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGN 312
++V A+ I +H P + D ++ L+G
Sbjct: 259 ---LLVEAKG-----IKEHY---------------FKPYISKLFD--------KKILKGE 287
Query: 313 IEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+L+ +F N K VNK YEEY+L+VGDFDERIFL
Sbjct: 288 -----CLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFL 322
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++R+E LSRD+VKHLN EEQ+L+SLAW +NS LW+ + S +P CE+
Sbjct: 539 VVIRSEEGLSRDMVKHLNSIEEQILESLAWTNNSALWEALHASANRVPSCEE 590
>gi|292374|gb|AAA02489.1| p107 [Homo sapiens]
gi|449005|prf||1918267A p107 protein
Length = 1068
Score = 253 bits (647), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 198/340 (58%), Gaps = 40/340 (11%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
Q LC LN+D +A EA + + + +Y+LEG HWL CSLYV+CRK+ +PTV +
Sbjct: 22 QALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVTHWLACSLYVACRKSIIPTVGKG-IM 80
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
EGN V LT +L+ K+SL QF +K +KW DM LP FR +I RLERNF VS VIF KY
Sbjct: 81 EGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFKKYE 140
Query: 134 PMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSF 193
P+F ++F+ P +E R K++ I C+ +F F W LFV TK + + +DLVNS+
Sbjct: 141 PIFLDIFQNP-YEEPPKLPRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVNSY 199
Query: 194 HLLIATCDLIYANVIQSKLR-DIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGC 252
HLL+ DLI+AN I R D++NP F+G+PS+F + F ++PPCII++LC+ HDG
Sbjct: 200 HLLLCCLDLIFANAIMCPNRQDLLNPSFKGLPSDFHTADFTASEEPPCIIAVLCELHDG- 258
Query: 253 KLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGN 312
++V A+ I +H P + D + L+G
Sbjct: 259 ---LLVEAKG-----IKEHY---------------FKPYISKLFD--------RKILKGE 287
Query: 313 IEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+L+ +F N K VNK YEEY+L+VGDFDERIFL
Sbjct: 288 -----CLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFL 322
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 40/52 (76%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++R+E LSRD+VKHLN EEQ+L+SLAW +S LW+ ++ S ++P CE+
Sbjct: 539 VVIRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQVSANKVPTCEE 590
>gi|34577077|ref|NP_899662.1| retinoblastoma-like protein 1 isoform b [Homo sapiens]
gi|21595246|gb|AAH32247.1| Retinoblastoma-like 1 (p107) [Homo sapiens]
gi|119596495|gb|EAW76089.1| retinoblastoma-like 1 (p107), isoform CRA_b [Homo sapiens]
gi|123994215|gb|ABM84709.1| retinoblastoma-like 1 (p107) [synthetic construct]
gi|124126913|gb|ABM92229.1| retinoblastoma-like 1 (p107) [synthetic construct]
Length = 1014
Score = 253 bits (647), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 198/340 (58%), Gaps = 40/340 (11%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
Q LC LN+D +A EA + + + +Y+LEG HWL CSLYV+CRK+ +PTV +
Sbjct: 22 QALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVTHWLACSLYVACRKSIIPTVGKG-IM 80
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
EGN V LT +L+ K+SL QF +K +KW DM LP FR +I RLERNF VS VIF KY
Sbjct: 81 EGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFKKYE 140
Query: 134 PMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSF 193
P+F ++F+ P +E R K++ I C+ +F F W LFV TK + + +DLVNS+
Sbjct: 141 PIFLDIFQNP-YEEPPKLPRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVNSY 199
Query: 194 HLLIATCDLIYANVIQSKLR-DIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGC 252
HLL+ DLI+AN I R D++NP F+G+PS+F + F ++PPCII++LC+ HDG
Sbjct: 200 HLLLCCLDLIFANAIMCPNRQDLLNPSFKGLPSDFHTADFTASEEPPCIIAVLCELHDG- 258
Query: 253 KLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGN 312
++V A+ I +H P + D + L+G
Sbjct: 259 ---LLVEAKG-----IKEHY---------------FKPYISKLFD--------RKILKGE 287
Query: 313 IEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+L+ +F N K VNK YEEY+L+VGDFDERIFL
Sbjct: 288 -----CLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFL 322
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 40/52 (76%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++R+E LSRD+VKHLN EEQ+L+SLAW +S LW+ ++ S ++P CE+
Sbjct: 539 VVIRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQVSANKVPTCEE 590
>gi|350594907|ref|XP_001925314.4| PREDICTED: retinoblastoma-like protein 1 [Sus scrofa]
Length = 979
Score = 253 bits (647), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 200/340 (58%), Gaps = 40/340 (11%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
Q LC LN+D +A EA + + + Y+LEG +HWL CSLYV+CRK+ +PTV +
Sbjct: 22 QALCQELNLDEGSAAEALDDFTAIRGTYSLEGEVIHWLACSLYVACRKSIIPTVGKG-IM 80
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
EGN V LT +L+ K+SL QF +K +KW DM LP FR +I RLERNF VS VIF K+
Sbjct: 81 EGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFKKFE 140
Query: 134 PMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSF 193
P+F ++F+ P +E R K++ I C+ ++F F W LFV TK + + +DLVNS+
Sbjct: 141 PIFLDIFQSP-YEEPPKLPRSRKQRRIPCSVKELFNFCWTLFVYTKGNFRMIGDDLVNSY 199
Query: 194 HLLIATCDLIYAN-VIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGC 252
HLL+ DLI+AN +I RD++NP F+G+PS+F + F ++PPCII++LC+ HDG
Sbjct: 200 HLLLCCLDLIFANAIICPNRRDLLNPSFKGLPSDFHTADFRAPEEPPCIIAVLCELHDG- 258
Query: 253 KLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGN 312
++V A+ I +H P + D + L+G
Sbjct: 259 ---LLVEAKG-----IKEHY---------------FKPYISKLFD--------RKILKGE 287
Query: 313 IEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+L+ +F N K VNK YEEY+L+VGDFDERIFL
Sbjct: 288 -----CLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFL 322
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 40/52 (76%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++R+E LSRD+VKHLN EEQ+L+SLAW +S LW+ ++ S ++P CE+
Sbjct: 539 VVIRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQASANKVPTCEE 590
>gi|397524105|ref|XP_003832050.1| PREDICTED: retinoblastoma-like protein 1 [Pan paniscus]
Length = 1031
Score = 253 bits (647), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 198/340 (58%), Gaps = 40/340 (11%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
Q LC LN+D +A EA + + + +Y+LEG HWL CSLYV+CRK+ +PTV +
Sbjct: 22 QALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVTHWLACSLYVACRKSIIPTVGKG-IM 80
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
EGN V LT +L+ K+SL QF +K +KW DM LP FR +I RLERNF VS VIF KY
Sbjct: 81 EGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFKKYE 140
Query: 134 PMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSF 193
P+F ++F+ P +E R K++ I C+ +F F W LFV TK + + +DLVNS+
Sbjct: 141 PIFLDIFQNP-YEEPPKLPRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVNSY 199
Query: 194 HLLIATCDLIYANVIQSKLR-DIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGC 252
HLL+ DLI+AN I R D++NP F+G+PS+F + F ++PPCII++LC+ HDG
Sbjct: 200 HLLLCCLDLIFANAIMCPNRQDLLNPSFKGLPSDFHTADFRASEEPPCIIAVLCELHDG- 258
Query: 253 KLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGN 312
++V A+ I +H P + D + L+G
Sbjct: 259 ---LLVEAKG-----IKEHY---------------FKPYISKLFD--------RKILKGE 287
Query: 313 IEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+L+ +F N K VNK YEEY+L+VGDFDERIFL
Sbjct: 288 -----CLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFL 322
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 40/52 (76%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++R+E LSRD+VKHLN EEQ+L+SLAW +S LW+ ++ S ++P CE+
Sbjct: 539 VVIRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQVSANKVPTCEE 590
>gi|114681879|ref|XP_001139919.1| PREDICTED: retinoblastoma-like protein 1 isoform 5 [Pan
troglodytes]
gi|410207844|gb|JAA01141.1| retinoblastoma-like 1 (p107) [Pan troglodytes]
gi|410249806|gb|JAA12870.1| retinoblastoma-like 1 (p107) [Pan troglodytes]
gi|410249808|gb|JAA12871.1| retinoblastoma-like 1 (p107) [Pan troglodytes]
gi|410249810|gb|JAA12872.1| retinoblastoma-like 1 (p107) [Pan troglodytes]
gi|410293784|gb|JAA25492.1| retinoblastoma-like 1 (p107) [Pan troglodytes]
gi|410293786|gb|JAA25493.1| retinoblastoma-like 1 (p107) [Pan troglodytes]
gi|410331983|gb|JAA34938.1| retinoblastoma-like 1 (p107) [Pan troglodytes]
Length = 1068
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 198/340 (58%), Gaps = 40/340 (11%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
Q LC LN+D +A EA + + + +Y+LEG HWL CSLYV+CRK+ +PTV +
Sbjct: 22 QALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVTHWLACSLYVACRKSIIPTVGKG-IM 80
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
EGN V LT +L+ K+SL QF +K +KW DM LP FR +I RLERNF VS VIF KY
Sbjct: 81 EGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFKKYE 140
Query: 134 PMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSF 193
P+F ++F+ P +E R K++ I C+ +F F W LFV TK + + +DLVNS+
Sbjct: 141 PIFLDIFQNP-YEEPPKLPRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVNSY 199
Query: 194 HLLIATCDLIYANVIQSKLR-DIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGC 252
HLL+ DLI+AN I R D++NP F+G+PS+F + F ++PPCII++LC+ HDG
Sbjct: 200 HLLLCCLDLIFANAIMCPNRQDLLNPSFKGLPSDFHTADFRASEEPPCIIAVLCELHDG- 258
Query: 253 KLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGN 312
++V A+ I +H P + D + L+G
Sbjct: 259 ---LLVEAKG-----IKEHY---------------FKPYISKLFD--------RKILKGE 287
Query: 313 IEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+L+ +F N K VNK YEEY+L+VGDFDERIFL
Sbjct: 288 -----CLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFL 322
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 40/52 (76%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++R+E LSRD+VKHLN EEQ+L+SLAW +S LW+ ++ S ++P CE+
Sbjct: 539 VVIRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQVSANKVPTCEE 590
>gi|417405745|gb|JAA49574.1| Putative rb retinoblastoma tumor suppressor-related protein
[Desmodus rotundus]
Length = 1067
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 140/340 (41%), Positives = 199/340 (58%), Gaps = 40/340 (11%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
Q LC LN+D +A EA + + + +Y+LEG +HWL CSLYV+CRK+ +PTV +
Sbjct: 22 QALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVIHWLACSLYVACRKSIIPTVGKG-IM 80
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
EGN V LT +L+ K+SL QF +K +KW DM LP FR +I RLERNF VS +IF K+
Sbjct: 81 EGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTIIFKKFE 140
Query: 134 PMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSF 193
P+F ++F+ P +E R K++ CT +F F W LFV TK + + +DLVNS+
Sbjct: 141 PIFLDIFQNP-YEETPKLPRSRKQRRTPCTVKDLFNFCWTLFVYTKGNFRMIGDDLVNSY 199
Query: 194 HLLIATCDLIYAN-VIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGC 252
HLL+ DLI+AN +I RD++NP F+G+PS+F + F ++PPC+I++LC+ HDG
Sbjct: 200 HLLLCCLDLIFANAIICPNRRDLLNPSFKGLPSDFHTADFRAPEEPPCVIAVLCELHDG- 258
Query: 253 KLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGN 312
++V A+ I +H P + D + L+G
Sbjct: 259 ---LLVEAKG-----IKEHY---------------FKPYISKLFD--------RKILKGE 287
Query: 313 IEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+L+ +F N K VNK YEEY+L+VGDFDERIFL
Sbjct: 288 -----CLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFL 322
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 40/52 (76%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++R+E LSRD+VKHLN EEQ+L+SLAW NS LW+ ++ S ++P CE+
Sbjct: 538 VVIRSEEGLSRDMVKHLNSIEEQILESLAWNHNSALWEALQASANKVPTCEE 589
>gi|402882604|ref|XP_003904828.1| PREDICTED: LOW QUALITY PROTEIN: retinoblastoma-like protein 1
[Papio anubis]
Length = 1067
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 198/340 (58%), Gaps = 40/340 (11%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
Q LC LN+D +A EA + + + +Y+LEG HWL CSLYV+CRK+ +PTV +
Sbjct: 22 QALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVTHWLACSLYVACRKSIIPTVGKG-IM 80
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
EGN V LT +L+ K+SL QF +K +KW DM LP FR +I RLERNF VS VIF KY
Sbjct: 81 EGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFKKYE 140
Query: 134 PMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSF 193
P+F ++F+ P +E R K++ I C+ +F F W LFV TK + + +DLVNS+
Sbjct: 141 PIFLDIFQNP-YEEPPKLPRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVNSY 199
Query: 194 HLLIATCDLIYANVIQSKLR-DIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGC 252
HLL+ DLI+AN I R D++NP F+G+PS+F + F ++PPCII++LC+ HDG
Sbjct: 200 HLLLCCLDLIFANAIMCPNRQDLLNPSFKGLPSDFHTADFRASEEPPCIIAVLCELHDG- 258
Query: 253 KLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGN 312
++V A+ I +H P + D + L+G
Sbjct: 259 ---LLVEAKG-----IKEHY---------------FKPYISKLFD--------RKILKGE 287
Query: 313 IEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+L+ +F N K VNK YEEY+L+VGDFDERIFL
Sbjct: 288 -----CLLDLSSFTDNCKAVNKEYEEYVLTVGDFDERIFL 322
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 40/52 (76%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++R+E LSRD+VKHLN EEQ+L+SLAW +S LW+ ++ S ++P CE+
Sbjct: 539 VVIRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQVSANKVPTCEE 590
>gi|390360951|ref|XP_799020.3| PREDICTED: LOW QUALITY PROTEIN: retinoblastoma-like protein 2-like
[Strongylocentrotus purpuratus]
Length = 1047
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 133/320 (41%), Positives = 188/320 (58%), Gaps = 35/320 (10%)
Query: 9 TAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVN 68
T + +ELCM+LN+D T K AW +Y+ + +YTLEG + WL C+LYV+CR++ VPTV
Sbjct: 12 TKDRFEELCMSLNLDDATKKTAWESYERICLNYTLEGDDIQWLACALYVACRRSVVPTV- 70
Query: 69 SNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVI 128
SN +EGN V LT LL+ K+S+ QF NK +KW+DM LP FR K+ RLERNFAVS VI
Sbjct: 71 SNGIVEGNGVSLTQLLRSAKLSVIQFFNKMKKWSDMANLPQQFRDKVDRLERNFAVSTVI 130
Query: 129 FTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSND 188
F KY P+F +FK + D R K + + CTS VF F W +FVL K + +S+D
Sbjct: 131 FKKYQPIFYHLFK--EGDNTPRPPRSRKHRRLPCTSQDVFSFCWTIFVLVKGNFPAISDD 188
Query: 189 LVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKH 248
LVNS+HLL+ + DL++AN + + RD++NP+F+G+P + + + PCII LC+
Sbjct: 189 LVNSYHLLLCSLDLMFANAVLANRRDLLNPEFQGLPEGYTSRDYRVPSEAPCIIDKLCEV 248
Query: 249 HDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQK 308
HDG L E + ++ W + + K I+D +
Sbjct: 249 HDGLVL---------------------EAKSINEHYWKPH--IQKLIDD---------ED 276
Query: 309 LRGNIEDLSAILEPENFDYN 328
L GN+E LS IL+ NF+ N
Sbjct: 277 LEGNLEKLSNILDTNNFESN 296
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 37/51 (72%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCE 306
+I+RAE LSRDIVKHLN EE +L AW S+SPLW +++S Q +P CE
Sbjct: 476 LILRAEEGLSRDIVKHLNFIEEAILQDYAWRSDSPLWDLLQESNQGVPTCE 526
>gi|1144388|gb|AAB18279.1| p107, partial [Mus musculus]
Length = 1063
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 198/340 (58%), Gaps = 40/340 (11%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
Q LC LN+D +A EA + + + +Y+LEG +HWL CSLYV+CRK+ +PTV +
Sbjct: 22 QALCPELNLDEGSAAEALDDFTAIRGNYSLEGEVIHWLACSLYVACRKSIIPTVGKG-VM 80
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
EGN V LT +L+ K+SL QF +K +KW DM LP FR +I RLERNF VS VIF K+
Sbjct: 81 EGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFKKFE 140
Query: 134 PMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSF 193
P+F ++F+ P +E R K++ I C+ +F F W LFV TK + + +DLVNS+
Sbjct: 141 PIFLDIFQNP-YEEPPKLPRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVNSY 199
Query: 194 HLLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGC 252
HLL+ DLI+AN I RD++NP F+G+PS+F F ++PPCII++LC HDG
Sbjct: 200 HLLLCCLDLIFANAIMCPNRRDLLNPSFKGLPSDFHAPDFKAXEEPPCIIAVLCDLHDG- 258
Query: 253 KLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGN 312
++V A+ I +H P + D ++ L+G
Sbjct: 259 ---LLVEAKG-----IKEHY---------------FKPYISKLFD--------KKILKGE 287
Query: 313 IEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+L+ +F N K VNK YEEY+L+VGDFDERIFL
Sbjct: 288 -----CLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFL 322
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++R+E LSRD+VKHLN EEQ+L+SLAW +NS LW+ + S +P CE+
Sbjct: 539 VVIRSEEGLSRDMVKHLNSIEEQILESLAWTNNSALWEALHASANRVPSCEE 590
>gi|297707032|ref|XP_002830322.1| PREDICTED: LOW QUALITY PROTEIN: retinoblastoma-like protein 1
[Pongo abelii]
Length = 1069
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 197/340 (57%), Gaps = 40/340 (11%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
Q LC LN+D +A EA + + +Y+LEG HWL CSLYV+CRK+ +PTV +
Sbjct: 23 QALCQELNLDEGSAAEALEDFTAIRGNYSLEGEVTHWLACSLYVACRKSIIPTVGKG-IM 81
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
EGN V LT +L+ K+SL QF +K +KW DM LP FR +I RLERNF VS VIF KY
Sbjct: 82 EGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFKKYE 141
Query: 134 PMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSF 193
P+F ++F+ P +E R K++ I C+ +F F W LFV TK + + +DLVNS+
Sbjct: 142 PIFLDIFQNP-YEEPPKLPRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVNSY 200
Query: 194 HLLIATCDLIYANVIQSKLR-DIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGC 252
HLL+ DLI+AN I R D++NP F+G+PS+F + F ++PPCII++LC+ HDG
Sbjct: 201 HLLLCCLDLIFANAIMCPNRQDLLNPSFKGLPSDFHTADFRASEEPPCIIAVLCELHDG- 259
Query: 253 KLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGN 312
++V A+ I +H P + D + L+G
Sbjct: 260 ---LLVEAKG-----IKEHY---------------FKPYISKLFD--------RKILKGE 288
Query: 313 IEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+L+ +F N K VNK YEEY+L+VGDFDERIFL
Sbjct: 289 -----CLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFL 323
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 40/52 (76%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++R+E LSRD+VKHLN EEQ+L+SLAW +S LW+ ++ S ++P CE+
Sbjct: 540 VVIRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQVSANKVPTCEE 591
>gi|426391643|ref|XP_004062178.1| PREDICTED: retinoblastoma-like protein 1 [Gorilla gorilla gorilla]
Length = 962
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 198/340 (58%), Gaps = 40/340 (11%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
Q LC LN+D +A EA + + + +Y+LEG HWL CSLYV+CRK+ +PTV +
Sbjct: 22 QALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVTHWLACSLYVACRKSIIPTVGKG-IM 80
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
EGN V LT +L+ K+SL QF +K +KW DM LP FR +I RLERNF VS VIF KY
Sbjct: 81 EGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFKKYE 140
Query: 134 PMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSF 193
P+F ++F+ P +E R K++ I C+ +F F W LFV TK + + +DLVNS+
Sbjct: 141 PIFLDIFQNP-YEEPPKLPRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVNSY 199
Query: 194 HLLIATCDLIYANVIQSKLR-DIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGC 252
HLL+ DLI+AN I R D++NP F+G+PS+F + F ++PPCII++LC+ HDG
Sbjct: 200 HLLLCCLDLIFANAIMCPNRQDLLNPSFKGLPSDFHTADFRASEEPPCIIAVLCELHDG- 258
Query: 253 KLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGN 312
++V A+ I +H P + D + L+G
Sbjct: 259 ---LLVEAKG-----IKEHY---------------FKPYISKLFD--------RKILKGE 287
Query: 313 IEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+L+ +F N K VNK YEEY+L+VGDFDERIFL
Sbjct: 288 -----CLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFL 322
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGN 312
V++R+E LSRD+VKHLN EEQ+L+SLAW +S LW+ ++ S ++P CE+ + N
Sbjct: 490 VVIRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQVSANKVPTCEEVIFPN 546
>gi|213417872|ref|NP_001132988.1| retinoblastoma-like protein 1 isoform 2 [Mus musculus]
gi|1871227|gb|AAB53236.1| p68 [Mus musculus]
Length = 594
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 198/340 (58%), Gaps = 40/340 (11%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
Q LC LN+D +A EA + + + +Y+LEG +HWL CSLYV+CRK+ +PTV +
Sbjct: 22 QALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVIHWLACSLYVACRKSIIPTVGKG-VM 80
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
EGN V LT +L+ K+SL QF +K +KW DM LP FR +I RLERNF VS VIF K+
Sbjct: 81 EGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFKKFE 140
Query: 134 PMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSF 193
P+F ++F+ P +E R K++ I C+ +F F W LFV TK + + +DLVNS+
Sbjct: 141 PIFLDIFQNP-YEEPPKLPRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVNSY 199
Query: 194 HLLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGC 252
HLL+ DLI+AN I RD++NP F+G+PS+F F ++PPCII++LC HDG
Sbjct: 200 HLLLCCLDLIFANAIMCPNRRDLLNPSFKGLPSDFHAPDFKAAEEPPCIIAVLCDLHDG- 258
Query: 253 KLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGN 312
++V A + I +H P + D ++ L+G
Sbjct: 259 ---LLVEA-----KGIKEHY---------------FKPYISKLFD--------KKILKGE 287
Query: 313 IEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+L+ +F N K VNK YEEY+L+VGDFDERIFL
Sbjct: 288 -----CLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFL 322
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 41/56 (73%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRG 311
V++R+E LSRD+VKHLN EEQ+L+SLAW +NS LW+ + S +P CE+ +G
Sbjct: 539 VVIRSEEGLSRDMVKHLNSIEEQILESLAWTNNSALWEALHASANRVPSCEEVSQG 594
>gi|26329065|dbj|BAC28271.1| unnamed protein product [Mus musculus]
Length = 594
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 198/340 (58%), Gaps = 40/340 (11%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
Q LC LN+D +A EA + + + +Y+LEG +HWL CSLYV+CRK+ +PTV +
Sbjct: 22 QALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVIHWLACSLYVACRKSIIPTVGKG-VM 80
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
EGN V LT +L+ K+SL QF +K +KW DM LP FR +I RLERNF VS VIF K+
Sbjct: 81 EGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFKKFE 140
Query: 134 PMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSF 193
P+F ++F+ P +E R K++ I C+ +F F W LFV TK + + +DLVNS+
Sbjct: 141 PIFLDIFQNP-YEEPPKLPRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVNSY 199
Query: 194 HLLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGC 252
HLL+ DLI+AN I RD++NP F+G+PS+F F ++PPCII++LC HDG
Sbjct: 200 HLLLCCLDLIFANAIMCPNRRDLLNPSFKGLPSDFHAPDFKAAEEPPCIIAVLCDLHDG- 258
Query: 253 KLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGN 312
++V A + I +H P + D ++ L+G
Sbjct: 259 ---LLVEA-----KGIKEHY---------------FKPYISKLFD--------KKILKGE 287
Query: 313 IEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+L+ +F N K VNK YEEY+L+VGDFDERIFL
Sbjct: 288 -----CLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFL 322
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 41/56 (73%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRG 311
V++R+E LSRD+VKHLN EEQ+L+SLAW +NS LW+ + S +P CE+ +G
Sbjct: 539 VVIRSEEGLSRDMVKHLNSIEEQILESLAWTNNSALWEALHASANRVPSCEEVSQG 594
>gi|119603207|gb|EAW82801.1| retinoblastoma-like 2 (p130), isoform CRA_a [Homo sapiens]
Length = 1067
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 139/317 (43%), Positives = 190/317 (59%), Gaps = 36/317 (11%)
Query: 37 MSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTIEGNLVCLTSLLKHCKMSLNQFLN 96
MS YTLEG+ LHWL C+LYV+CRK+ VPTV S T+EGN V LT +LK + SL +F N
Sbjct: 1 MSESYTLEGNDLHWLACALYVACRKS-VPTV-SKGTVEGNYVSLTRILKCSEQSLIEFFN 58
Query: 97 KCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNK 156
K +KW DM LP FR + RLERNF VS VIF KY P+F+++FK P +E R K
Sbjct: 59 KMKKWEDMANLPPHFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQ-EEQPRQQRGRK 117
Query: 157 KKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCDLIYANVIQ-SKLRDI 215
++ CT +++F F W+LF+ K + +S+DLVNS+HLL+ DL+Y N +Q S +++
Sbjct: 118 QRRQPCTVSEIFHFCWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKEL 177
Query: 216 VNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLT 275
VNP+F+G+ +F P DPPCII LC HDG L ++ I +H
Sbjct: 178 VNPNFKGLSEDFHAKDSKPSSDPPCIIEKLCSLHDGLVL---------EAKGIKEHF--- 225
Query: 276 EEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKM 335
W P + + + ++ L+G E+L+ LEP NF +FK +NK
Sbjct: 226 ---------W---KPYIRKLYE--------KKLLKGKEENLTGFLEPGNFGESFKAINKA 265
Query: 336 YEEYILSVGDFDERIFL 352
YEEY+LSVG+ DERIFL
Sbjct: 266 YEEYVLSVGNLDERIFL 282
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW SPLW+ I D+ +P CE+
Sbjct: 498 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWEKIRDNENRVPTCEE 549
>gi|300797402|ref|NP_001179531.1| retinoblastoma-like protein 1 [Bos taurus]
gi|440905887|gb|ELR56207.1| Retinoblastoma-like protein 1 [Bos grunniens mutus]
Length = 1068
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 199/340 (58%), Gaps = 40/340 (11%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
Q LC LN+D +A EA + + + +Y+LEG +HWL CSLYV+CRK+ +PTV +
Sbjct: 22 QALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVIHWLACSLYVACRKSIIPTVGKG-IM 80
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
EGN V LT +L+ K+SL QF +K +KW DM LP FR +I RLERNF VS VIF K+
Sbjct: 81 EGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFKKFE 140
Query: 134 PMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSF 193
P+F ++F+ P +E R K++ I C+ ++F F W LFV TK + + +DLVNS+
Sbjct: 141 PIFLDIFQNP-YEEPPKLPRSRKQRRIPCSVKELFNFCWTLFVYTKGNFRMIGDDLVNSY 199
Query: 194 HLLIATCDLIYANVIQSKLR-DIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGC 252
HLL+ DLI+AN I R +++NP F+G+PSNF + F ++PPCII +LC+ HDG
Sbjct: 200 HLLLCCLDLIFANAIMCPNRQELLNPSFKGLPSNFQTADFRASEEPPCIIPVLCELHDG- 258
Query: 253 KLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGN 312
++V A+ I +H P + D + L+G
Sbjct: 259 ---LLVEAKG-----IKEHY---------------FKPYISKLFD--------RKILKGE 287
Query: 313 IEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+L+ +F N K VNK YEEY+L+VGDFDERIFL
Sbjct: 288 -----CLLDLCSFTDNSKAVNKEYEEYVLTVGDFDERIFL 322
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 39/52 (75%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++R+E LSRD+VKHLN EEQ+L+SLAW +S LW+ ++ S +P CE+
Sbjct: 539 VVIRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQASENRVPTCEE 590
>gi|344279617|ref|XP_003411584.1| PREDICTED: retinoblastoma-like protein 1 [Loxodonta africana]
Length = 1067
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 141/340 (41%), Positives = 199/340 (58%), Gaps = 40/340 (11%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
Q LC LN+D +A +A + + + +Y+LEG +HWL CSLYV+CRK+ +PTV +
Sbjct: 22 QALCQELNLDEGSAAKALDDFTAIRGNYSLEGEVIHWLACSLYVACRKSVIPTVGKG-IM 80
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
EGN V LT +L+ K+SL QF +K +KW DM LP FR +I RLERNF VS VIF K+
Sbjct: 81 EGNCVSLTRILRSAKLSLIQFFSKMKKWMDMLNLPQEFRERIERLERNFEVSTVIFKKFE 140
Query: 134 PMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSF 193
P+F ++F+ P +EL R K++ I C+ +F F W LFV TK + + +DLVNS+
Sbjct: 141 PIFLDIFQNP-YEELPKLPRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVNSY 199
Query: 194 HLLIATCDLIYAN-VIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGC 252
HLL+ DLI+AN +I RD++NP F+G+P +F + F ++PPCII+ LC+ HDG
Sbjct: 200 HLLLCCLDLIFANALICPNRRDLLNPSFKGLPPHFHTADFRASEEPPCIIAELCELHDG- 258
Query: 253 KLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGN 312
++V A+ I +H P + D + L+G
Sbjct: 259 ---LLVEAKG-----IKEHY---------------FKPYISKLFD--------RKILKGE 287
Query: 313 IEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+L+ +F N K VNK YEEY+L+VGDFDERIFL
Sbjct: 288 -----CLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFL 322
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 40/52 (76%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++R+E LSRD+VKHLN EEQ+L+SLAW +S LW+ ++ S ++P CE+
Sbjct: 539 VVIRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQASANKVPTCEE 590
>gi|348563785|ref|XP_003467687.1| PREDICTED: LOW QUALITY PROTEIN: retinoblastoma-like protein 1-like
[Cavia porcellus]
Length = 1071
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 136/340 (40%), Positives = 194/340 (57%), Gaps = 40/340 (11%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
Q LC LN+D +A EA + + + +Y+LEG +HWL CSLYV+CRK+ +PTV +
Sbjct: 22 QALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVIHWLACSLYVACRKSIIPTVGKG-IM 80
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
EGN V LT +L+ K+SL +F +K +KW DM LP FR +I RLERNF VS VIF K+
Sbjct: 81 EGNCVSLTRILRSAKLSLIEFFSKMKKWMDMLNLPQEFRERIERLERNFEVSTVIFKKFE 140
Query: 134 PMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSF 193
P+F ++F+ P +EL R K++ I C+ +F F W LFV TK + + +DLVNS+
Sbjct: 141 PIFLDIFQNP-YEELPKLPRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVNSY 199
Query: 194 HLLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGC 252
HLL+ DL++AN I RD++N F+G+PS+F + F +PPCII++LC+ HDG
Sbjct: 200 HLLLCCLDLVFANAIMCPNRRDLLNLSFKGLPSDFHTADFRASAEPPCIIAVLCELHDGL 259
Query: 253 KLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGN 312
+V+ + E +A + + + K
Sbjct: 260 ---------------LVEAKGIKEHYFKPYIAKLFDRKILKG------------------ 286
Query: 313 IEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+L+ +F N K VNK YEEY+L+VGDFDERIFL
Sbjct: 287 ----ECLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFL 322
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++R+E LSRD+VKHLN EEQ+L+SLAW NS LW+ + S ++P CE+
Sbjct: 539 VVIRSEEGLSRDMVKHLNSIEEQILESLAWSHNSALWEALSASANKVPTCEE 590
>gi|332208986|ref|XP_003253591.1| PREDICTED: retinoblastoma-like protein 1 [Nomascus leucogenys]
Length = 1068
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 197/340 (57%), Gaps = 40/340 (11%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
Q LC LN+D +A EA + + + +Y+LEG HWL CSLYV+CRK+ +PTV +
Sbjct: 22 QALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVTHWLACSLYVACRKSIIPTVGKG-IM 80
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
EGN V LT +L+ K+SL QF +K +KW DM LP FR +I RLERNF VS VIF KY
Sbjct: 81 EGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFKKYE 140
Query: 134 PMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSF 193
P+F ++F+ P +E R K++ I C+ +F F W LFV TK + + +DLVNS+
Sbjct: 141 PIFLDIFQNP-YEEPPKLPRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVNSY 199
Query: 194 HLLIATCDLIYANVIQSKLR-DIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGC 252
HLL+ DLI+AN I R D++NP F+G+PS+F + F ++ PCII++LC+ HDG
Sbjct: 200 HLLLCCLDLIFANAIMCPNRQDLLNPSFKGLPSDFHTADFRASEELPCIIAVLCELHDG- 258
Query: 253 KLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGN 312
++V A+ I +H P + D + L+G
Sbjct: 259 ---LLVEAKG-----IKEHY---------------FKPYISKLFD--------RKILKGE 287
Query: 313 IEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+L+ +F N K VNK YEEY+L+VGDFDERIFL
Sbjct: 288 -----CLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFL 322
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 40/52 (76%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++R+E LSRD+VKHLN EEQ+L+SLAW +S LW+ ++ S ++P CE+
Sbjct: 539 VVIRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQVSANKVPTCEE 590
>gi|291388626|ref|XP_002710823.1| PREDICTED: retinoblastoma-like protein 1 [Oryctolagus cuniculus]
Length = 1068
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 140/337 (41%), Positives = 196/337 (58%), Gaps = 40/337 (11%)
Query: 17 CMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTIEGN 76
C LN+D +A EA + + + +Y+LEG +HWL CSLYV+CRK+ +PTV +EGN
Sbjct: 25 CQELNLDEGSAAEALDDFATIRGNYSLEGEIMHWLACSLYVACRKSIIPTVGKG-IMEGN 83
Query: 77 LVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLPMF 136
V LT +L+ K+SL QF +K +KW DM L FR +I RLERNF VS VIF K+ P+F
Sbjct: 84 CVSLTRILRSAKLSLIQFFSKMKKWMDMSNLSQEFRERIERLERNFEVSTVIFKKFEPIF 143
Query: 137 KEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFHLL 196
++F+ P +EL R K++ I C+ +F F W LFV TK + + +DLVNS+HLL
Sbjct: 144 LDIFQNP-YEELPKLPRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVNSYHLL 202
Query: 197 IATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGCKLC 255
+ DLI+AN I RD++NP F+G+PS F + F ++PPCII++LC+ HDG
Sbjct: 203 LCCLDLIFANAIMCPNRRDLLNPSFKGLPSAFHTADFQAPEEPPCIIAVLCELHDG---- 258
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIED 315
++V A+ I +H P + D + L+G
Sbjct: 259 LLVEAKG-----IKEHY---------------FKPYISKLFD--------RKILKGE--- 287
Query: 316 LSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+L+ +F N K VNK YEEY+L+VGDFDERIFL
Sbjct: 288 --CLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFL 322
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 40/52 (76%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++R+E LSRD+VKHLN EEQ+L+SLAW +S LW+ ++ S ++P CE+
Sbjct: 539 VVIRSEEGLSRDMVKHLNSIEEQILESLAWSHSSVLWEALQASANKVPTCEE 590
>gi|410907800|ref|XP_003967379.1| PREDICTED: retinoblastoma-like protein 2-like [Takifugu rubripes]
Length = 1084
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 143/352 (40%), Positives = 204/352 (57%), Gaps = 36/352 (10%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
++LC ALN+D A EAW Y+ +S ++TLEGS+LHWL CSLYV+CR ++VPTV T
Sbjct: 16 EDLCRALNMDEEAANEAWKTYESISRNFTLEGSELHWLACSLYVACR-SSVPTVGKG-TS 73
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
EGN V LT +L+ +MSL +F NK +KW DM LP FR +LERNF VS VIF KY+
Sbjct: 74 EGNYVSLTRILRCSEMSLIEFFNKMKKWQDMANLPQEFRQSTNKLERNFTVSAVIFKKYV 133
Query: 134 PMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSF 193
P+FK +FK P + +H R K++ CT ++VF F W+LFV K + +S+DLVNS+
Sbjct: 134 PIFKSIFKAPSEEPPRVH-RSRKQRRHPCTISEVFNFCWVLFVHAKGNFPMISDDLVNSY 192
Query: 194 HLLIATCDLIYANVIQSKLR-DIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGC 252
HLL+ DL+ N + R +++NP+F+G+P +F + P P C + LCK HDG
Sbjct: 193 HLLLCALDLVLTNALLCNARKELLNPNFKGLPEDFSSKDYRPCAGPYCFMEQLCKLHDGL 252
Query: 253 KLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGN 312
L EA + + +H W P K + ++ LRG
Sbjct: 253 VL------EA---KGVKEHF------------W---KPFIKKLFH--------KRILRGK 280
Query: 313 IEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFLPKFQSFDETAPG 364
+ L+ L+P NF +F ++++YEE+IL+ G DERIF + S + PG
Sbjct: 281 EDSLTGFLDPMNFGDSFLSLSRVYEEHILATGSLDERIFTGEGASEEIGTPG 332
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 25/168 (14%)
Query: 232 FAPLDDPPCIISI--LCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNS 289
+ P D P +ISI L +H + V+VR+E L R++VKHLN EEQVL+SLAW SNS
Sbjct: 505 YRPPGDFPNLISIFQLPAYHFYKVIEVLVRSEQGLFREVVKHLNQVEEQVLESLAWTSNS 564
Query: 290 PLWKNIEDSGQEIPGCE-----QKLRGNIEDLSAIL--EPENFDYNFKVVNK-------- 334
PLW+ + + ++P C+ Q L N + S L P N N + +
Sbjct: 565 PLWETLRGAKDQVPACKQVMPPQYLEQNNDSSSGSLPITPVNQGQNLNIGSALKGMSPSP 624
Query: 335 --MYEEYIL-SVGDFDERIFLPKFQSFDETAPGSSGP-GLDDLSPAPA 378
+ + Y VG F R+F+ + ++ PG++ G+ PAPA
Sbjct: 625 TTLLDRYSSPPVGPFRRRLFVEQ----QDSQPGATAKNGVSTAGPAPA 668
>gi|194578849|ref|NP_001124082.1| retinoblastoma-like protein 1 [Danio rerio]
gi|190338209|gb|AAI62986.1| Rbl1 protein [Danio rerio]
Length = 1058
Score = 247 bits (631), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 143/378 (37%), Positives = 209/378 (55%), Gaps = 48/378 (12%)
Query: 5 ADNETAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATV 64
AD + LC LN+D TA EA ++ + + YTLEG +HWL CSLY +CRK+++
Sbjct: 14 ADGSIRSNFEALCQELNMDEETAAEALQNFRSIWNTYTLEGDVMHWLACSLYAACRKSSI 73
Query: 65 PTVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAV 124
PTV +EGN V LT +L+ K+SL QF +K +KW+DM L FRS+I RLERNF V
Sbjct: 74 PTVGRG-VMEGNCVSLTRILRSAKLSLIQFFSKMKKWSDMANLCQDFRSRIGRLERNFEV 132
Query: 125 SKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLD 184
S VIF K+ P+F +MF+ P + M R K + + C + VF+F W LFV TK +
Sbjct: 133 STVIFRKFEPIFLDMFQNPQSEPPRMP-RSRKHRRLPCHISDVFKFCWTLFVYTKGNFHM 191
Query: 185 VSNDLVNSFHLLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIIS 243
+ +DLVNS+HLL+ DL++ N + S +D++N +F G+P + + L + PC+I
Sbjct: 192 IGDDLVNSYHLLLCCLDLVFCNALMCSNRKDLINQNFRGLPKDTEN-----LKEMPCVID 246
Query: 244 ILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIP 303
LC+ HDG ++V A+ I +H P K + +
Sbjct: 247 KLCELHDG----LVVEAKG-----IKEHY---------------FKPYIKTLFE------ 276
Query: 304 GCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFLPKFQSFDETAP 363
++ L+G++E L+ +L+ NF N K +N+ YEE++L+VGDFDER+FL A
Sbjct: 277 --KRMLKGDVETLTELLDTPNFQDNNKAINRDYEEFVLTVGDFDERVFL--------GAD 326
Query: 364 GSSGPGLDDLSPAPAPGG 381
G SPA P G
Sbjct: 327 ADEEIGTPRKSPAEPPSG 344
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +R+E LSRD+VKHLN EEQVL+S AW +S LW + ++P E+
Sbjct: 540 VFIRSEEGLSRDMVKHLNSIEEQVLESRAWTRDSALWNALNKDNNKVPTVEE 591
>gi|449486109|ref|XP_004175454.1| PREDICTED: LOW QUALITY PROTEIN: retinoblastoma-like protein 1
[Taeniopygia guttata]
Length = 1048
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 138/353 (39%), Positives = 201/353 (56%), Gaps = 40/353 (11%)
Query: 1 MGQLADNETAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCR 60
M + A + + LC LN+D+ +A EA + + Y+LEG LHWL C+LYV+CR
Sbjct: 1 MSRSAPADPGAAVERLCRELNLDAASAAEALRDFTALRGTYSLEGEALHWLACALYVACR 60
Query: 61 KATVPTVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLER 120
++ VPTV S+ +EGN V LT +L+ ++SL QF +K +KW DM LP FR ++ RLER
Sbjct: 61 RSRVPTVGSS-PMEGNGVSLTRILRSARLSLIQFFSKMKKWMDMSNLPQEFRERVERLER 119
Query: 121 NFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKA 180
NF VS VIF K+ P+F ++F+ P + H R K++ + C+ +F F W LFV TK
Sbjct: 120 NFEVSTVIFKKFEPIFFDIFQNPYEESSKPH-RSRKQRRVPCSVKDLFNFCWTLFVYTKG 178
Query: 181 EYLDVSNDLVNSFHLLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPP 239
+ + +DLVNS+HLL+ DLI+AN + RD++NP F+G+P F +DPP
Sbjct: 179 NFRMIGDDLVNSYHLLLCCLDLIFANALLCPNRRDVLNPSFKGLPVEFHTLEIKSSEDPP 238
Query: 240 CIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSG 299
CII++LC+ HDG ++V A+ I +H P + D
Sbjct: 239 CIIAMLCELHDG----LLVEAKG-----IKEHY---------------FKPYIAKLFD-- 272
Query: 300 QEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+ L+G+ +L+ NF N K +NK YEEY+L+VGDFDER+FL
Sbjct: 273 ------RKILKGD-----CLLDLCNFTENSKTLNKEYEEYVLTVGDFDERVFL 314
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 39/52 (75%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++R+E LSRD+VKHLN EEQ+L++LAW +S LW +E S ++P CE+
Sbjct: 530 VLIRSEEGLSRDMVKHLNSIEEQILENLAWTRHSALWDALEASENKVPTCEE 581
>gi|321465662|gb|EFX76662.1| hypothetical protein DAPPUDRAFT_322171 [Daphnia pulex]
Length = 1052
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 138/355 (38%), Positives = 193/355 (54%), Gaps = 36/355 (10%)
Query: 1 MGQLADNE-TAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSC 59
+ + AD E T + + LC LNID TA EAW Y+ +S +YTLEG ++HWL C+LYV+C
Sbjct: 3 LSEDADQENTEERFRGLCADLNIDKNTADEAWRNYETISTNYTLEGDRIHWLCCALYVAC 62
Query: 60 RKATVPTVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLE 119
R +TVPTV T+EGN V LT L + C +S+ F +K RKWADM L + R K LE
Sbjct: 63 RNSTVPTVGQVGTVEGNCVSLTQLRRKCNISMLDFFDKSRKWADMANLSEELRRKFVSLE 122
Query: 120 RNFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTK 179
RNF V VIF KY MFKE+F+ P +++ R K + + C++ V++F W FV K
Sbjct: 123 RNFEVCSVIFKKYDEMFKEIFQDP-VNDPPRQPRSRKSRKLPCSAKDVYDFCWAFFVRIK 181
Query: 180 AEYLDVSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPP 239
+ + +LV+ FHLL+A D IY N + + R++ NP F G+PS+F + +P
Sbjct: 182 TNFSQIHEELVSCFHLLLACLDYIYGNSLVANRRELFNPQFPGLPSDFHSRDYKAPTEPG 241
Query: 240 CIISILCKH---HDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
CI+ L D + + R + + R VK +L E++VL
Sbjct: 242 CIVECLYSRNSSQDEKTVVDVKRIKTHVLRPYVK--SLIEKEVL---------------- 283
Query: 297 DSGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIF 351
+G+ L IL+ FD N KVVN YE+Y+ VGDFDERIF
Sbjct: 284 -------------KGDKRTLCGILDTAVFDLNKKVVNNDYEDYVHRVGDFDERIF 325
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++RAE LSRD+VKHLN EEQ+L+S+AW SPLW+ ++ Q IP CE+
Sbjct: 550 VLIRAE-DLSRDVVKHLNHMEEQILESMAWRYQSPLWEYLKSCDQPIPSCEE 600
>gi|345319489|ref|XP_001520195.2| PREDICTED: retinoblastoma-like protein 2 [Ornithorhynchus anatinus]
Length = 1074
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 135/323 (41%), Positives = 191/323 (59%), Gaps = 38/323 (11%)
Query: 33 AYKEMSHHYTLE--GSQLHWLGCSLYVSCRKATVPTVNSNRTIEGNLVCLTSLLKHCKMS 90
A + S Y+ + G+ LHWL C+LYV+CRK +VPTV S T+EGN V LT +L+ + S
Sbjct: 10 AQQRTSGKYSKQPKGNDLHWLACALYVACRK-SVPTV-SRGTVEGNYVSLTRILRCSEQS 67
Query: 91 LNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLPMFKEMFKPPDLDELLM 150
L +F NK +KW DM LP+ FR + RLERNF VS VIF K+ P+F+++FK P +E
Sbjct: 68 LIEFFNKMKKWEDMANLPERFRERTERLERNFTVSAVIFKKFEPIFQDIFKYPQ-EEQPR 126
Query: 151 HVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCDLIYANVIQ- 209
R K++ CT ++VF F W+LFV K + +S+DLVNS+HLL+ DL+Y N +Q
Sbjct: 127 PPRGRKQRRQPCTVSEVFHFCWVLFVYAKGNFPMISDDLVNSYHLLLCALDLVYGNAVQC 186
Query: 210 SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGCKLCVIVRAEASLSRDIV 269
S R+++NP+F+G+P +F + P +PPCII LC HDG L ++ I
Sbjct: 187 SNRRELLNPNFKGLPEDFQNKDSKPSSEPPCIIEKLCSLHDGLVL---------EAKGIK 237
Query: 270 KHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIEDLSAILEPENFDYNF 329
+H W P + + D ++ L+G E L+ L+P NF +
Sbjct: 238 EHF------------W---KPYIRKLFD--------KKLLKGKEESLTGFLDPGNFGDSV 274
Query: 330 KVVNKMYEEYILSVGDFDERIFL 352
K +NK YEEY+LSVG+ DERIFL
Sbjct: 275 KAINKAYEEYVLSVGNLDERIFL 297
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 59/137 (43%), Gaps = 14/137 (10%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKL------ 309
V +RAE L R++VKHLN EEQ+LD +AW +SPLW I D+ ++P CE+ +
Sbjct: 513 VFIRAEDGLCREVVKHLNHIEEQILDHMAWKPDSPLWDRIRDNENKVPTCEEVMPPQNLE 572
Query: 310 RGNIEDLSAILEP--------ENFDYNFKVVNKMYEEYILSVGDFDERIFLPKFQSFDET 361
RG+ + + P E +YE Y R +
Sbjct: 573 RGDGGVAGSPMTPRRVTEVRAETGGPGRSSPTSLYERYSSPAASTTRRRLFADNDGPSDA 632
Query: 362 APGSSGPGLDDLSPAPA 378
AP S P + PA A
Sbjct: 633 APPSRAPSQTLVGPAAA 649
>gi|410919169|ref|XP_003973057.1| PREDICTED: retinoblastoma-like protein 1-like [Takifugu rubripes]
Length = 1033
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 136/341 (39%), Positives = 198/341 (58%), Gaps = 36/341 (10%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
++LC LN+D TA EA + + +TLEG +HWL CSLY +CRK + PTV +
Sbjct: 24 EKLCQELNMDEQTATEAMQNFTAIWATHTLEGDVVHWLACSLYAACRKGSTPTVGKG-LM 82
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
EGN V LT +L+ K+SL QF +K RKWADM L +FR ++ +LERNF VS VIF K+
Sbjct: 83 EGNCVSLTRILRTSKLSLIQFFSKMRKWADMSNLSQNFRLRLKQLERNFEVSMVIFRKFE 142
Query: 134 PMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSF 193
+F +MF+ P +E R K + + C T VF+F W LFV K + + +DLVNS+
Sbjct: 143 LIFVDMFQNPQGEEPPRKSRTRKHRRLPCHITDVFKFCWTLFVYAKGNFCMIGDDLVNSY 202
Query: 194 HLLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNF-LDSHFAPLDDPPCIISILCKHHDG 251
HLL+ DL++ N + S ++++N F+G+P+ + D AP PPC++ LC+ HDG
Sbjct: 203 HLLLCCLDLVFGNALLCSNRKELINSSFKGLPAAYHADGRTAP-QRPPCVLERLCELHDG 261
Query: 252 CKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRG 311
++V A+ I +H P + + + +Q L+G
Sbjct: 262 ----LVVEAKG-----IKQHY---------------FKPYIQKLFE--------KQILKG 289
Query: 312 NIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
N E L+ +L+P+NF N K +NK YEEY+L+VGDFDER+FL
Sbjct: 290 NEEHLTELLDPQNFIENNKALNKEYEEYVLTVGDFDERVFL 330
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 38/52 (73%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +R+E LSRD+VKHLN EEQVL+S AW ++S LW ++ +G ++P E+
Sbjct: 535 VFIRSEEGLSRDMVKHLNQIEEQVLESQAWSTDSALWSALQAAGSQVPTVEE 586
>gi|348583631|ref|XP_003477576.1| PREDICTED: LOW QUALITY PROTEIN: retinoblastoma-like protein 2-like
[Cavia porcellus]
Length = 1142
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 141/343 (41%), Positives = 196/343 (57%), Gaps = 40/343 (11%)
Query: 15 ELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTIE 74
ELC LN+D EAW++Y+ MS YTLEG+ LHWL C+LYV+CRK+ VPTV S T+E
Sbjct: 51 ELCSRLNMDEAARAEAWDSYRSMSESYTLEGNDLHWLACALYVACRKS-VPTV-SKGTVE 108
Query: 75 GNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLP 134
GN V LT +L+ + SL +F NK +KW DM LP +FR + RLERNF VS VIF KY P
Sbjct: 109 GNYVSLTRILRCSQQSLIEFFNKMKKWEDMANLPPNFRERTERLERNFTVSAVIFKKYEP 168
Query: 135 MFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAE---YLDVSNDLVN 191
+F+++FK P +E R K++ CT +++F F W+LF+ K + YL ++ D +N
Sbjct: 169 IFQDIFKYPQ-EEQPRQQRGRKQRRQPCTVSEIFHFCWVLFIYAKGKKGXYLYINXDDLN 227
Query: 192 SFHLLIATCDLIYANVIQSKLRDI--VNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHH 249
S H ++ L+Y N++ D+ V G+ +F P DPPC+I LC H
Sbjct: 228 SIHAILLFIFLVYYNLVYGVTTDLHFVTVYIIGLSEDFPTKDSKPSSDPPCVIEKLCSLH 287
Query: 250 DGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKL 309
DG L EA + I +H W P + + + ++ L
Sbjct: 288 DGLVL------EA---KGIKEHF------------W---KPYIRKLYE--------KKLL 315
Query: 310 RGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+G E+L+ LEP NF +FK +NK YEEY+LSVG+ DERIFL
Sbjct: 316 KGKEENLTGFLEPGNFGESFKAINKAYEEYVLSVGNLDERIFL 358
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 35/52 (67%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW SPLW I D+ +P CE+
Sbjct: 574 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWDKIRDNDNRVPTCEE 625
>gi|338723332|ref|XP_001492739.3| PREDICTED: retinoblastoma-like protein 2 [Equus caballus]
Length = 1145
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 136/327 (41%), Positives = 191/327 (58%), Gaps = 37/327 (11%)
Query: 28 KEAWNAYKEMSHH-YTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTIEGNLVCLTSLLKH 86
+ WN S + L+G+ LHWL C+LYV+CRK +VPTV S T+EGN V LT +L+
Sbjct: 68 RARWNLSLAKSQFCFILQGNDLHWLACALYVACRK-SVPTV-SKGTVEGNYVSLTRILRC 125
Query: 87 CKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLPMFKEMFKPPDLD 146
+ SL +F NK +KW DM LP FR + RLERNF VS VIF KY P+F+++FK P +
Sbjct: 126 SEQSLIEFFNKMKKWEDMANLPQHFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQ-E 184
Query: 147 ELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCDLIYAN 206
E R K++ CT ++VF F W+LF+ K + +S+DLVNS+HLL+ DL+Y N
Sbjct: 185 EQPRQQRGRKQRRQPCTVSEVFHFCWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGN 244
Query: 207 VIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGCKLCVIVRAEASLS 265
+Q S +++VNP+F+G+ +F P DPPC+I LC HDG L +
Sbjct: 245 ALQCSNRKELVNPNFKGLSEDFHAKDSKPSSDPPCVIEKLCSLHDGLVL---------EA 295
Query: 266 RDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIEDLSAILEPENF 325
+ I +H W P + + + ++ L+G E+L+ LEP NF
Sbjct: 296 KGIKEHF------------W---KPYIRKLYE--------KKLLKGKEENLTGFLEPGNF 332
Query: 326 DYNFKVVNKMYEEYILSVGDFDERIFL 352
+FK +NK YEEY+LSVG+ DERIFL
Sbjct: 333 GESFKAINKAYEEYVLSVGNLDERIFL 359
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 35/52 (67%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
+ +RAE L R++VKHLN EEQ+LD LAW SPLW I D+ +P CE+
Sbjct: 575 IFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWDRIRDNENRVPTCEE 626
>gi|363741428|ref|XP_417312.3| PREDICTED: retinoblastoma-like protein 1 [Gallus gallus]
Length = 1061
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 132/340 (38%), Positives = 194/340 (57%), Gaps = 40/340 (11%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
+ LC LN+D+ +A EA + + Y+LEG HWL C+LY +CR++ +PTV S +
Sbjct: 21 ERLCRELNLDAGSAAEALRDFTALRGTYSLEGDAQHWLACALYAACRRSVLPTVGSG-VM 79
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
EGN V LT +L+ ++SL QF +K +KW DM +P FR ++ RLERNF VS VIF K+
Sbjct: 80 EGNCVSLTRILRSARLSLIQFFSKMKKWMDMSNVPQEFRERVERLERNFEVSTVIFRKFE 139
Query: 134 PMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSF 193
P+F ++F+ P+ +E R K++ + C +F F W LFV TK + + +DLVNS+
Sbjct: 140 PIFLDIFQNPN-EETSKPQRSRKQRRVLCGVKDLFNFCWTLFVYTKGNFRMIGDDLVNSY 198
Query: 194 HLLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGC 252
HLL+ DL++AN I RD++NP F+G+P++F +DPPCII+ LC+ HDG
Sbjct: 199 HLLLCCLDLVFANAILCPNRRDLLNPSFKGLPADFHAPEMKASEDPPCIIATLCELHDG- 257
Query: 253 KLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGN 312
++V A+ I +H P + D + L+G
Sbjct: 258 ---LLVEAKG-----IKEHY---------------FKPYISKLFD--------RKILKGE 286
Query: 313 IEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+L+ NF N K +NK YEEY+L+VGDFDER+FL
Sbjct: 287 -----CLLDLCNFTENNKALNKEYEEYVLTVGDFDERVFL 321
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 38/52 (73%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++R+E LSRD+VKHLN EEQ+L+SLAW +S LW ++ S +P CE+
Sbjct: 538 VLIRSEEGLSRDMVKHLNSIEEQILESLAWTRDSALWTALQASENRVPTCEE 589
>gi|431914123|gb|ELK15382.1| Retinoblastoma-like protein 2, partial [Pteropus alecto]
Length = 974
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 134/323 (41%), Positives = 191/323 (59%), Gaps = 39/323 (12%)
Query: 34 YKEMSHH---YTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTIEGNLVCLTSLLKHCKMS 90
Y ++ H + L+G+ LHWL C+LYV+CRK +VPTV S T+EGN V LT +L+ + S
Sbjct: 1 YSSLAKHQLSFILQGNDLHWLACALYVACRK-SVPTV-SKGTVEGNYVSLTRILRCSEQS 58
Query: 91 LNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLPMFKEMFKPPDLDELLM 150
L +F NK +KW +M LP FR + RLERNF VS VIF KY P+F+++FK P +E
Sbjct: 59 LIEFFNKMKKWEEMANLPQHFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQ-EEPPR 117
Query: 151 HVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCDLIYANVIQ- 209
R K++ CT ++VF F W+LF+ K + +S+DLVNS+HLL+ DL+Y N +Q
Sbjct: 118 QQRGRKQRRQPCTVSEVFHFCWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQC 177
Query: 210 SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGCKLCVIVRAEASLSRDIV 269
S +++VNP+F+G+ +F P DPPC+I LC HDG L ++ I
Sbjct: 178 SNRKELVNPNFKGLSEDFHAKDSKPSSDPPCVIEKLCSLHDGLVL---------EAKGIK 228
Query: 270 KHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIEDLSAILEPENFDYNF 329
+H W P + + + ++ L+G E+L+ LEP NF +F
Sbjct: 229 EHF------------W---KPYIRKLYE--------KKLLKGKEENLTGFLEPGNFGESF 265
Query: 330 KVVNKMYEEYILSVGDFDERIFL 352
K +NK YEEY+LSVG+ DERIFL
Sbjct: 266 KAINKAYEEYVLSVGNLDERIFL 288
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 35/52 (67%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW SPLW I D+ +P CE+
Sbjct: 458 VFIRAEDGLCREVVKHLNEIEEQILDHLAWKPESPLWDRIRDNENRVPTCEE 509
>gi|410983523|ref|XP_003998088.1| PREDICTED: retinoblastoma-like protein 2 [Felis catus]
Length = 1265
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 136/334 (40%), Positives = 195/334 (58%), Gaps = 41/334 (12%)
Query: 20 LNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTIEGNLVC 79
+ I ++ A+ N Y + L+G+ LHWL C+LYV+CRK +VPTV S T+EGN V
Sbjct: 186 MAIPASEAQPCKNQYS-----FILQGNDLHWLACALYVACRK-SVPTV-SKGTVEGNYVS 238
Query: 80 LTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLPMFKEM 139
LT +L+ + SL +F +K +KW DM LP FR + RLERNF VS VIF KY P+F+++
Sbjct: 239 LTRILRCSEQSLLEFFHKMKKWEDMANLPPHFRERTERLERNFTVSAVIFKKYEPIFQDI 298
Query: 140 FKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIAT 199
FK P +E R K++ CT ++VF F W+LF+ K + +S+DLVNS+HLL+
Sbjct: 299 FKYPQ-EEQPRQQRGRKQRRQPCTVSEVFHFCWVLFIYAKGNFPMISDDLVNSYHLLLCA 357
Query: 200 CDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGCKLCVIV 258
DL+Y N +Q S +++VNP+F+G+ +F P DPPC+I LC HDG L
Sbjct: 358 LDLVYGNALQCSNRKELVNPNFKGLSEDFHAKDSKPSSDPPCVIEKLCSLHDGLVL---- 413
Query: 259 RAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIEDLSA 318
++ I +H W P + + + ++ L+G E+L+
Sbjct: 414 -----EAKGIKEHF------------W---KPYIRKLYE--------KKLLKGKEENLTG 445
Query: 319 ILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
LEP NF +FK +NK YEEY+LSVG+ DERIFL
Sbjct: 446 FLEPGNFAESFKAINKAYEEYVLSVGNLDERIFL 479
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 35/52 (67%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW SPLW I D+ +P CE+
Sbjct: 696 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWDRIRDNENRVPTCEE 747
>gi|355715606|gb|AES05381.1| retinoblastoma-like 2 [Mustela putorius furo]
Length = 1058
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 132/309 (42%), Positives = 184/309 (59%), Gaps = 36/309 (11%)
Query: 45 GSQLHWLGCSLYVSCRKATVPTVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADM 104
G+ LHWL C+LYV+CRK +VPTV S T+EGN V LT +L+ + SL +F NK +KW DM
Sbjct: 1 GNDLHWLACALYVACRK-SVPTV-SKGTVEGNYVSLTRILRCSEQSLIEFFNKMKKWEDM 58
Query: 105 RKLPDSFRSKIARLERNFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTS 164
LP FR + RLERNF VS VIF KY P+F+++FK P +E R K++ CT
Sbjct: 59 ANLPPHFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQ-EEQPRQQRGRKQRRQPCTV 117
Query: 165 TKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCDLIYANVIQ-SKLRDIVNPDFEGM 223
++VF F W+LF+ K + +S+DLVNS+HLL+ DL+Y N +Q S +++VNP+F+G+
Sbjct: 118 SEVFHFCWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGL 177
Query: 224 PSNFLDSHFAPLDDPPCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSL 283
+F P DPPC+I LC HDG L ++ I +H
Sbjct: 178 SEDFHAKDSKPSSDPPCVIEKLCSLHDGLVL---------EAKGIKEHF----------- 217
Query: 284 AWVSNSPLWKNIEDSGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSV 343
W P + + + ++ L+G E+L+ LEP NF +FK +NK YEEY+LSV
Sbjct: 218 -W---KPYIRKLYE--------KKLLKGKEENLTGFLEPGNFGESFKAINKAYEEYVLSV 265
Query: 344 GDFDERIFL 352
G+ DERIFL
Sbjct: 266 GNLDERIFL 274
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 35/52 (67%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW SPLW I D+ +P CE+
Sbjct: 489 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWDRIRDNENRVPTCEE 540
>gi|443696074|gb|ELT96854.1| hypothetical protein CAPTEDRAFT_120947 [Capitella teleta]
Length = 754
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 138/358 (38%), Positives = 202/358 (56%), Gaps = 44/358 (12%)
Query: 1 MGQLADNE--TAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQ---LHWLGCSL 55
MGQ D + T ++++LC+ LN+D +AW +++ ++H YTLE S+ +HWL C+L
Sbjct: 1 MGQSDDGDSITEKRYEDLCLDLNMDKNAKDDAWISFERITHSYTLEASRGDAIHWLTCAL 60
Query: 56 YVSCRKATVPTVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKI 115
YVSCRK+ VPTV +EGN V LT LL+ K+SL +F K +KW DM LP+ FRSK+
Sbjct: 61 YVSCRKSLVPTVGRG-IMEGNGVSLTRLLRSSKLSLIEFFKKMKKWLDMANLPEEFRSKV 119
Query: 116 ARLERNFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILF 175
RLERNF+VS VIF KY P+F ++F P E R K+K + C+ VF +TW +F
Sbjct: 120 DRLERNFSVSTVIFKKYKPIFLDLFNDP-AKEAPRPPRSRKQKRLPCSLKDVFNYTWTMF 178
Query: 176 VLTKAEYLDVSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPL 235
+L K ++ +S+DLVNS+HLL+ CD +YAN + S D++N F G+P F + P
Sbjct: 179 ILVKGKFPAISDDLVNSYHLLLCCCDWLYANALLSNRGDLLNRKFPGLPEKFDSKDYRPP 238
Query: 236 DDPPCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNI 295
+ PCI+ +L + H+G L E + + + W P +
Sbjct: 239 TETPCIVQLLSERHEGL---------------------LLEAKGIKAHWW---QPYITKL 274
Query: 296 EDSGQEIPGCEQKLRGNIEDLSAILEPENFDYNF-KVVNKMYEEYILSVGDFDERIFL 352
D+ K+ G I ++ L F +F K +N YEEY+L++ D DERIFL
Sbjct: 275 FDN---------KVCGLILNVLIYLM---FFVDFSKTINGTYEEYVLNLCDLDERIFL 320
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 239 PCIISI--LCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P II + L +H + V+VRAE LSRD+VKH+N EE +LDSLAW S LW I+
Sbjct: 509 PWIIDVFNLDPYHFYKVIEVLVRAEEGLSRDVVKHMNHIEELILDSLAWKDGSMLWDAIK 568
Query: 297 DSGQEIPGCEQ 307
+P E+
Sbjct: 569 QFPNGVPSVEE 579
>gi|395505952|ref|XP_003757300.1| PREDICTED: retinoblastoma-like protein 2 [Sarcophilus harrisii]
Length = 1059
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 129/309 (41%), Positives = 184/309 (59%), Gaps = 36/309 (11%)
Query: 45 GSQLHWLGCSLYVSCRKATVPTVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADM 104
G+ LHWL C+LYV+CRK+ VPTV S T+EGN V LT +L+ + SL +F NK +KW DM
Sbjct: 49 GNDLHWLACALYVACRKS-VPTV-SKGTVEGNYVSLTRILRCSEQSLIEFFNKMKKWEDM 106
Query: 105 RKLPDSFRSKIARLERNFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTS 164
LP FR + RLERNF VS VIF KY P+F+++F+ +E R K + CT
Sbjct: 107 ANLPSRFRERTERLERNFTVSAVIFKKYEPIFQDIFRYSQ-EEPPCQQRGRKYRRQPCTV 165
Query: 165 TKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCDLIYANVIQ-SKLRDIVNPDFEGM 223
++VF+F W+LFV K + +S+DLVNS+HLL+ DL+Y N +Q S ++++NP+F+G+
Sbjct: 166 SEVFQFCWVLFVYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELLNPNFKGL 225
Query: 224 PSNFLDSHFAPLDDPPCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSL 283
P +F + P DPPC+I LC HDG L ++ I +H
Sbjct: 226 PEDFHNKDSKPSSDPPCVIEPLCALHDGLVL---------EAKGIKEHF----------- 265
Query: 284 AWVSNSPLWKNIEDSGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSV 343
W P + + + ++ L+G E+L+ L+P NF + K +NK YEEY+LSV
Sbjct: 266 -W---KPYIRKLFE--------KKLLKGREENLTGFLDPGNFGDSIKAINKAYEEYVLSV 313
Query: 344 GDFDERIFL 352
G+ DERIFL
Sbjct: 314 GNLDERIFL 322
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 36/52 (69%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD +AW SPLW I D+ ++P CE+
Sbjct: 491 VFIRAEDGLCREVVKHLNHIEEQILDHMAWKPESPLWDRIRDNENKVPTCEE 542
>gi|2137620|pir||I49329 retinoblastoma-associated protein homolog p68 - mouse
Length = 592
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 135/325 (41%), Positives = 189/325 (58%), Gaps = 40/325 (12%)
Query: 29 EAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTIEGNLVCLTSLLKHCK 88
EA + + + +Y+LEG +HWL CSLYV+CRK+ +PTV +EGN V LT +L+ K
Sbjct: 35 EALDDFTAIRGNYSLEGEVIHWLACSLYVACRKSIIPTVGKG-VMEGNCVSLTRILRSAK 93
Query: 89 MSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLPMFKEMFKPPDLDEL 148
+SL QF +K +KW DM LP FR +I RLERNF VS VIF K+ P+F ++F+ P +E
Sbjct: 94 LSLIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFKKFEPIFLDIFQNP-YEEP 152
Query: 149 LMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCDLIYANVI 208
R K++ I C+ +F F W LFV TK + + +DLVNS+HLL+ DLI+AN I
Sbjct: 153 PKLPRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAI 212
Query: 209 Q-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGCKLCVIVRAEASLSRD 267
RD++NP F+G+PS+F F ++PPCII++LC HDG ++V A +
Sbjct: 213 MCPNRRDLLNPSFKGLPSDFHAPDFKAAEEPPCIIAVLCDLHDG----LLVEA-----KG 263
Query: 268 IVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIEDLSAILEPENFDY 327
I +H P + D ++ L+G +L+ +F
Sbjct: 264 IKEHY---------------FKPYISKLFD--------KKILKGE-----CLLDLSSFTD 295
Query: 328 NFKVVNKMYEEYILSVGDFDERIFL 352
N K VNK YEEY+L+VGDFDERIFL
Sbjct: 296 NSKAVNKEYEEYVLTVGDFDERIFL 320
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 41/56 (73%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRG 311
V++R+E LSRD+VKHLN EEQ+L+SLAW +NS LW+ + S +P CE+ +G
Sbjct: 537 VVIRSEEGLSRDMVKHLNSIEEQILESLAWTNNSALWEALHASANRVPSCEEVSQG 592
>gi|426241455|ref|XP_004014606.1| PREDICTED: retinoblastoma-like protein 1 [Ovis aries]
Length = 1066
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 137/340 (40%), Positives = 194/340 (57%), Gaps = 42/340 (12%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
Q LC LN+D + + + +S + +G +HWL CSLYV+CRK+ +PTV +
Sbjct: 22 QALCQELNLDEGSVLTKYIHFAVLS--FACQGEVIHWLACSLYVACRKSIIPTVGKG-IM 78
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
EGN V LT +L+ K+SL QF +K +KW DM LP FR +I RLERNF VS VIF K+
Sbjct: 79 EGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFKKFE 138
Query: 134 PMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSF 193
P+F ++F+ P +E R K++ I C+ ++F F W LFV TK + + +DLVNS+
Sbjct: 139 PIFLDIFQNP-YEEPPKLPRSRKQRRIPCSVKELFNFCWTLFVYTKGNFRMIGDDLVNSY 197
Query: 194 HLLIATCDLIYANVIQSKLR-DIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGC 252
HLL+ DLI+AN I R +++NP F+G+PSNF + F ++PPCII +LC+ HDG
Sbjct: 198 HLLLCCLDLIFANAIMCPNRQELLNPSFKGLPSNFQTADFRASEEPPCIIPVLCELHDG- 256
Query: 253 KLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGN 312
++V A + I +H P + D + L+G
Sbjct: 257 ---LLVEA-----KGIKEHY---------------FKPYISKLFD--------RKILKGE 285
Query: 313 IEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+L+ +F N K VNK YEEY+L+VGDFDERIFL
Sbjct: 286 -----CLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFL 320
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 39/52 (75%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++R+E LSRD+VKHLN EEQ+L+SLAW +S LW+ ++ S +P CE+
Sbjct: 537 VVIRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQASANRVPTCEE 588
>gi|194390190|dbj|BAG61857.1| unnamed protein product [Homo sapiens]
Length = 554
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 133/310 (42%), Positives = 185/310 (59%), Gaps = 36/310 (11%)
Query: 44 EGSQLHWLGCSLYVSCRKATVPTVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWAD 103
+G+ LHWL C+LYV+CRK +VPTV S T+EGN V LT +LK + SL +F NK +KW D
Sbjct: 6 KGNDLHWLACALYVACRK-SVPTV-SKGTVEGNYVSLTRILKCSEQSLIEFFNKMKKWED 63
Query: 104 MRKLPDSFRSKIARLERNFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCT 163
M LP FR + RLERNF VS VIF KY P+F+++FK P +E R K++ CT
Sbjct: 64 MANLPPHFRERTERLERNFTVSAVIFKKYEPIFQDIFKYPQ-EEQPRQQRGRKQRRQPCT 122
Query: 164 STKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCDLIYANVIQ-SKLRDIVNPDFEG 222
+++F F W+LF+ K + +S+DLVNS+HLL+ DL+Y N +Q S +++VNP+F+G
Sbjct: 123 VSEIFHFCWVLFICAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKG 182
Query: 223 MPSNFLDSHFAPLDDPPCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDS 282
+ +F P DPPCII LC HDG L ++ I +H
Sbjct: 183 LSEDFHAKDSKPSSDPPCIIEKLCSLHDGLVL---------EAKGIKEHF---------- 223
Query: 283 LAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILS 342
W P + + + ++ L+G E+L+ LEP NF +FK +NK YEEY+LS
Sbjct: 224 --W---KPYIRKLYE--------KKLLKGKEENLTGFLEPGNFGESFKAINKAYEEYVLS 270
Query: 343 VGDFDERIFL 352
VG+ DERIFL
Sbjct: 271 VGNLDERIFL 280
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW SPLW+ I D+ +P CE+
Sbjct: 496 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWEKIRDNENRVPTCEE 547
>gi|301758727|ref|XP_002915215.1| PREDICTED: LOW QUALITY PROTEIN: retinoblastoma-like protein 1-like
[Ailuropoda melanoleuca]
Length = 1151
Score = 234 bits (597), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 135/325 (41%), Positives = 186/325 (57%), Gaps = 43/325 (13%)
Query: 29 EAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTIEGNLVCLTSLLKHCK 88
E W A + SH +G +HWL CSLYV+CRK+ +PTV +EGN V LT +L+ K
Sbjct: 123 EVWAARFDESHP---QGEVIHWLACSLYVACRKSIIPTVGKG-IMEGNCVSLTRILRSAK 178
Query: 89 MSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLPMFKEMFKPPDLDEL 148
+SL QF +K +KW DM LP FR +I RLERNF VS VIF K+ P+F ++F+ P +E
Sbjct: 179 LSLIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFKKFEPIFLDIFQNP-FEEP 237
Query: 149 LMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCDLIYANVI 208
R K++ I C+ +F F W LFV TK + + +DLVNS+HLL+ DLI+AN I
Sbjct: 238 PKLPRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAI 297
Query: 209 Q-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGCKLCVIVRAEASLSRD 267
RD++NP F+G+P NF + F ++PPCII++LC+ HDG ++V A+
Sbjct: 298 MCPNRRDLLNPSFKGLPPNFHTADFRASEEPPCIIAVLCELHDG----LLVEAKG----- 348
Query: 268 IVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIEDLSAILEPENFDY 327
I +H P + D + L+G +L+ +F
Sbjct: 349 IKEHY---------------FKPYISKLFD--------RKILKGE-----CLLDLSSFTD 380
Query: 328 NFKVVNKMYEEYILSVGDFDERIFL 352
N K VNK YEEY+L+VGDFDERIFL
Sbjct: 381 NSKAVNKEYEEYVLTVGDFDERIFL 405
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 40/52 (76%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++R+E LSRD+VKHLN EEQ+L+SLAW +S LW+ ++ S ++P CE+
Sbjct: 622 VVIRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQASSNKVPTCEE 673
>gi|148674279|gb|EDL06226.1| retinoblastoma-like 1 (p107) [Mus musculus]
Length = 1075
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 139/340 (40%), Positives = 190/340 (55%), Gaps = 49/340 (14%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
Q LC LN+D N Y L+G +HWL CSLYV+CRK+ +PTV +
Sbjct: 43 QALCQELNLDE------GNMY---CVCIGLQGEVIHWLACSLYVACRKSIIPTVGKG-VM 92
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
EGN V LT +L+ K+SL QF +K +KW DM LP FR +I RLERNF VS VIF K+
Sbjct: 93 EGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFKKFE 152
Query: 134 PMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSF 193
P+F ++F+ P +E R K++ I C+ +F F W LFV TK + + +DLVNS+
Sbjct: 153 PIFLDIFQNP-YEEPPKLPRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVNSY 211
Query: 194 HLLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGC 252
HLL+ DLI+AN I RD++NP F+G+PS+F F ++PPCII++LC HDG
Sbjct: 212 HLLLCCLDLIFANAIMCPNRRDLLNPSFKGLPSDFHAPDFKAAEEPPCIIAVLCDLHDG- 270
Query: 253 KLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGN 312
++V A+ I +H P + D ++ L+G
Sbjct: 271 ---LLVEAKG-----IKEHY---------------FKPYISKLFD--------KKILKGE 299
Query: 313 IEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+L+ +F N K VNK YEEY+L+VGDFDERIFL
Sbjct: 300 -----CLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFL 334
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++R+E LSRD+VKHLN EEQ+L+SLAW +NS LW+ + S +P CE+
Sbjct: 551 VVIRSEEGLSRDMVKHLNSIEEQILESLAWTNNSALWEALHASANRVPSCEE 602
>gi|326927239|ref|XP_003209800.1| PREDICTED: retinoblastoma-like protein 2-like [Meleagris gallopavo]
Length = 1058
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 130/311 (41%), Positives = 185/311 (59%), Gaps = 36/311 (11%)
Query: 43 LEGSQLHWLGCSLYVSCRKATVPTVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWA 102
+ G++LHWL C+LYV+CRKA +PTV S T+E N V LT +L+ + SL +F NK +KW
Sbjct: 1 MHGNELHWLACALYVACRKA-IPTV-SRGTVESNYVSLTRILRCSEQSLIEFFNKMKKWE 58
Query: 103 DMRKLPDSFRSKIARLERNFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHC 162
DM LP FR + RLERNF VS VIF KY P+F+++F+ P D+ K++ C
Sbjct: 59 DMANLPSQFRERTERLERNFTVSAVIFKKYEPIFQDIFRYPQEDQPRQQR-GRKQRRQPC 117
Query: 163 TSTKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCDLIYANVIQ-SKLRDIVNPDFE 221
T ++VF+F W+LFV K + +S+DLVNS+HLL+ DL+Y N +Q ++++NP+F+
Sbjct: 118 TVSEVFQFCWVLFVHAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCPNHKELLNPNFK 177
Query: 222 GMPSNFLDSHFAPLDDPPCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLD 281
G+P +F + DPPCII LC H G L EA + I +H
Sbjct: 178 GLPEDFHSKDYKVSSDPPCIIEKLCSLHYGLVL------EA---KGIKEHF--------- 219
Query: 282 SLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYIL 341
W P + + D ++ L+G E+L+ L+P NF +FK +NK YEEY+L
Sbjct: 220 ---W---KPYIRKLFD--------KKLLKGKDENLTGFLDPGNFGDSFKAINKAYEEYVL 265
Query: 342 SVGDFDERIFL 352
SVG+ DERIFL
Sbjct: 266 SVGNLDERIFL 276
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 36/52 (69%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+L+S+AW S LW I D+ ++P CE+
Sbjct: 492 VFIRAEDGLCREVVKHLNHIEEQILESMAWKQESILWDRIRDNDNKVPSCEE 543
>gi|270009799|gb|EFA06247.1| hypothetical protein TcasGA2_TC009105 [Tribolium castaneum]
Length = 872
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 127/372 (34%), Positives = 202/372 (54%), Gaps = 50/372 (13%)
Query: 12 QHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNR 71
+H ELC L++ +++AW ++ ++ ++TLEG LHW+GC++YVSC K+ T N
Sbjct: 13 KHSELCNKLHLSQQISRDAWERFETINKNFTLEGEPLHWIGCAIYVSCWKSIAATAAQN- 71
Query: 72 TIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTK 131
++ N V LT+LL+HC +S+ QF K ++W+DM +P+ F+ +I LE +F+V+ +F +
Sbjct: 72 SVHTNCVNLTNLLRHCNLSIAQFFYKIKQWSDMASMPEEFKKRIEYLEGSFSVAYNVFKE 131
Query: 132 YLPMFKEMFKPPDLDEL----LMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSN 187
Y P+F ++FK P E R+ K K + + KVFEF W LF+ K+E + +N
Sbjct: 132 YQPLFMQIFKAPKAPEAHELDTSKHRNRKNKPVPSSPLKVFEFCWTLFITIKSEDTNYNN 191
Query: 188 DLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCK 247
DLV S HLLIA CD + + +Q+ +D++NPDF G+P +F + P + PCI+S+LC
Sbjct: 192 DLVTSCHLLIAICDWAFKHALQADRKDLLNPDFAGLPEDFAQPSYVPPSEAPCIVSLLCP 251
Query: 248 HHDGCKLCVIVRAEASLSRDIVKHLNLTEE-QVLDSLAWVSNSPLWKNIEDSGQEIPGCE 306
S +I+ L +E Q S+ +N D G I
Sbjct: 252 -----------------SPNIITDLKYVKEYQFKKSI---------RNYLDQGVLIEN-- 283
Query: 307 QKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFLPKF--------QSF 358
D +L+ FD+N+K + +YE+ IL+ DFDERIFL ++ QS
Sbjct: 284 --------DQGDVLDTSVFDHNYKSIGNVYEKNILNKSDFDERIFLAEYKRKLLVRDQSV 335
Query: 359 DETAPGSSGPGL 370
+ A ++ P L
Sbjct: 336 AQNAADNASPEL 347
>gi|91086521|ref|XP_971815.1| PREDICTED: similar to Retinoblastoma-like protein 1 (107 kDa
retinoblastoma-associated protein) (p107) (PRB1)
[Tribolium castaneum]
Length = 940
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 127/372 (34%), Positives = 202/372 (54%), Gaps = 50/372 (13%)
Query: 12 QHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNR 71
+H ELC L++ +++AW ++ ++ ++TLEG LHW+GC++YVSC K+ T N
Sbjct: 13 KHSELCNKLHLSQQISRDAWERFETINKNFTLEGEPLHWIGCAIYVSCWKSIAATAAQN- 71
Query: 72 TIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTK 131
++ N V LT+LL+HC +S+ QF K ++W+DM +P+ F+ +I LE +F+V+ +F +
Sbjct: 72 SVHTNCVNLTNLLRHCNLSIAQFFYKIKQWSDMASMPEEFKKRIEYLEGSFSVAYNVFKE 131
Query: 132 YLPMFKEMFKPPDLDEL----LMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSN 187
Y P+F ++FK P E R+ K K + + KVFEF W LF+ K+E + +N
Sbjct: 132 YQPLFMQIFKAPKAPEAHELDTSKHRNRKNKPVPSSPLKVFEFCWTLFITIKSEDTNYNN 191
Query: 188 DLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCK 247
DLV S HLLIA CD + + +Q+ +D++NPDF G+P +F + P + PCI+S+LC
Sbjct: 192 DLVTSCHLLIAICDWAFKHALQADRKDLLNPDFAGLPEDFAQPSYVPPSEAPCIVSLLCP 251
Query: 248 HHDGCKLCVIVRAEASLSRDIVKHLNLTEE-QVLDSLAWVSNSPLWKNIEDSGQEIPGCE 306
S +I+ L +E Q S+ +N D G I
Sbjct: 252 -----------------SPNIITDLKYVKEYQFKKSI---------RNYLDQGVLIEN-- 283
Query: 307 QKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFLPKF--------QSF 358
D +L+ FD+N+K + +YE+ IL+ DFDERIFL ++ QS
Sbjct: 284 --------DQGDVLDTSVFDHNYKSIGNVYEKNILNKSDFDERIFLAEYKRKLLVRDQSV 335
Query: 359 DETAPGSSGPGL 370
+ A ++ P L
Sbjct: 336 AQNAADNASPEL 347
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
+I+R+ LSRD +KHLN+ EE +L SL W S+S +W+ I S +E+P E+
Sbjct: 522 LIIRSRDKLSRDTIKHLNMIEETILSSLVWKSDSLIWEAITSSDREVPKFEE 573
>gi|327271628|ref|XP_003220589.1| PREDICTED: retinoblastoma-like protein 1-like [Anolis carolinensis]
Length = 1026
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 128/338 (37%), Positives = 192/338 (56%), Gaps = 40/338 (11%)
Query: 16 LCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTIEG 75
LC LN+D+ +A EA + + Y+LEG +HWL C+LYV+CRK+ +PTV S +EG
Sbjct: 22 LCRELNLDAGSAAEALRDFSALRGTYSLEGETVHWLACALYVACRKSIIPTVGSG-LMEG 80
Query: 76 NLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLPM 135
N V LT +L+ K+SL QF +K +KW DM L FR ++ RLERNF VS VIF K+ P+
Sbjct: 81 NCVSLTRILRTAKLSLIQFFSKMKKWMDMSNLSHEFRERVERLERNFEVSTVIFKKFTPI 140
Query: 136 FKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFHL 195
F ++FK P ++ + R K++ I C++ +F F W LFV TK + + +DLVNS+HL
Sbjct: 141 FLDIFKNPYEEQPKLQ-RSRKQRRIPCSAKDLFNFCWTLFVYTKGNFSMIGDDLVNSYHL 199
Query: 196 LIATCDLIYANVIQSKLR-DIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGCKL 254
L+ DL + + + + D++N F+G+P +F + + PPCII+ LC+ HDG
Sbjct: 200 LLCCLDLTFTSALLCPHKIDLLNSSFKGLPEDFHKADSRTFEGPPCIIATLCELHDG--- 256
Query: 255 CVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIE 314
+++ A+ I +H P + D + L+G+
Sbjct: 257 -LLIEAKG-----IKEHY---------------FKPYISKLYD--------RKILKGD-- 285
Query: 315 DLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+L+ NF N K +NK YEEY+L+ GDFDER+FL
Sbjct: 286 ---CLLDLNNFLDNNKALNKEYEEYVLTEGDFDERVFL 320
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 37/52 (71%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++R+E LSRD VKHLN EEQ+L+SLAW +S LW ++ S + P CE+
Sbjct: 537 VLIRSEEGLSRDTVKHLNSIEEQILESLAWTKDSALWDALQASENKAPTCEE 588
>gi|355784516|gb|EHH65367.1| pRb1, partial [Macaca fascicularis]
Length = 1014
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 130/305 (42%), Positives = 179/305 (58%), Gaps = 40/305 (13%)
Query: 49 HWLGCSLYVSCRKATVPTVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLP 108
HWL CSLYV+CRK+ +PTV +EGN V LT +L+ K+SL QF +K +KW DM LP
Sbjct: 4 HWLACSLYVACRKSIIPTVGKG-IMEGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLP 62
Query: 109 DSFRSKIARLERNFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVF 168
FR +I RLERNF VS VIF KY P+F ++F+ P +E +R K++ I C+ +F
Sbjct: 63 QEFRERIERLERNFEVSTVIFKKYEPIFLDIFQNP-YEEPPKLLRSRKQRRIPCSVKDLF 121
Query: 169 EFTWILFVLTKAEYLDVSNDLVNSFHLLIATCDLIYANVIQSKLR-DIVNPDFEGMPSNF 227
F W LFV TK + + +DLVNS+HLL+ DLI+AN I R D++NP F+G+PS+F
Sbjct: 122 NFCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIMCPNRQDLLNPSFKGLPSDF 181
Query: 228 LDSHFAPLDDPPCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVS 287
+ F ++PPCII++LC+ HDG ++V A+ I +H
Sbjct: 182 HTADFRASEEPPCIIAVLCELHDG----LLVEAKG-----IKEHY--------------- 217
Query: 288 NSPLWKNIEDSGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFD 347
P + D + L+G +L+ +F N K VNK YEEY+L+VGDFD
Sbjct: 218 FKPYISKLFD--------RKILKGE-----CLLDLSSFTDNSKAVNKEYEEYVLTVGDFD 264
Query: 348 ERIFL 352
ERIFL
Sbjct: 265 ERIFL 269
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 40/52 (76%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++R+E LSRD+VKHLN EEQ+L+SLAW +S LW+ ++ S ++P CE+
Sbjct: 486 VVIRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQVSANKVPTCEE 537
>gi|334310911|ref|XP_003339554.1| PREDICTED: LOW QUALITY PROTEIN: retinoblastoma-like protein 1-like
[Monodelphis domestica]
Length = 1066
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 134/341 (39%), Positives = 189/341 (55%), Gaps = 41/341 (12%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
Q LC+ LN+D +A EA + + Y+LEG +HWL C+LYV+CRK+ +PTV +
Sbjct: 22 QALCLELNLDEGSAAEALGDFTAIRSTYSLEGEVVHWLACALYVACRKSIIPTVGKG-VM 80
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
EGN V LT +L+ K+SL QF +K +KW DM L FR +I RLERNF VS VIF K+
Sbjct: 81 EGNCVSLTRILRSAKLSLIQFFSKMKKWIDMSNLSQEFRERIDRLERNFEVSTVIFKKFE 140
Query: 134 PMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSF 193
P+F ++F+ P +E R K++ + CT +F F W LFV TK + +DLVNS+
Sbjct: 141 PIFLDIFRNP-YEEPPKLQRSRKQRRVPCTVKDLFNFCWTLFVYTKGNFRMKGDDLVNSY 199
Query: 194 HLLIATCDLIYANVIQ-SKLRDIVNPDFE-GMPSNFLDSHFAPLDDPPCIISILCKHHDG 251
HLL+ + DL + N I I++P G+PS+F F ++PPCII+ LC+ HDG
Sbjct: 200 HLLLXSLDLTFTNAIMCPXXXXILSPHAALGLPSDFHTPDFRVSEEPPCIIATLCELHDG 259
Query: 252 CKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRG 311
++V A+ I +H P + D + L+G
Sbjct: 260 ----LLVEAKG-----IKEHY---------------FKPYISKLFD--------RKILKG 287
Query: 312 NIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+L+ +F N K VNK YEEY+L+VGDFDER+FL
Sbjct: 288 E-----CLLDISSFADNSKAVNKEYEEYVLTVGDFDERVFL 323
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 37/52 (71%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++R+E LSRD VKHLN EEQ+L+SLAW S+S LW + S +P CE+
Sbjct: 540 VLIRSEEGLSRDTVKHLNSIEEQILESLAWSSDSALWDALHISENNVPTCEE 591
>gi|403281366|ref|XP_003932159.1| PREDICTED: retinoblastoma-like protein 1 [Saimiri boliviensis
boliviensis]
Length = 1115
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 130/313 (41%), Positives = 181/313 (57%), Gaps = 41/313 (13%)
Query: 41 YTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRK 100
+ +G HWL CSLYV+CRK+ +PTV +EGN V LT +L+ K+SL QF +K +K
Sbjct: 97 FACQGEVTHWLACSLYVACRKSIIPTVGKG-IMEGNCVSLTRILRSAKLSLIQFFSKMKK 155
Query: 101 WADMRKLPDSFRSKIARLERNFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMI 160
W DM LP FR +I RLERNF VS VIF K+ P+F ++F+ P E +R K++ I
Sbjct: 156 WMDMSNLPQEFRERIERLERNFEVSTVIFKKFEPIFLDIFQNP--YEEPPKLRSRKQRRI 213
Query: 161 HCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCDLIYANVIQSKLR-DIVNPD 219
C+ +F F W LFV TK + + +DLVNS+HLL+ DLI+AN I R D++NP
Sbjct: 214 PCSVKDLFNFCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIMCPNRQDLLNPS 273
Query: 220 FEGMPSNFLDSHFAPLDDPPCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQV 279
F+G+PS+F + F ++PPCII++LC+ HDG ++V A+ I +H
Sbjct: 274 FKGLPSDFHTADFRASEEPPCIIAVLCELHDG----LLVEAKG-----IKEHY------- 317
Query: 280 LDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEY 339
P + D + L+G +L+ +F N K VNK YEEY
Sbjct: 318 --------FKPYISKLFD--------RKILKGE-----CLLDLSSFTDNSKAVNKEYEEY 356
Query: 340 ILSVGDFDERIFL 352
+L+VGDFDERIFL
Sbjct: 357 VLTVGDFDERIFL 369
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 40/52 (76%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++R+E LSRD+VKHLN EEQ+L+SLAW NS LW+ ++ S ++P CE+
Sbjct: 586 VVIRSEEGLSRDMVKHLNSIEEQILESLAWSHNSALWEALQVSTNKVPTCEE 637
>gi|449269638|gb|EMC80395.1| Retinoblastoma-like protein 1, partial [Columba livia]
Length = 1005
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/341 (37%), Positives = 180/341 (52%), Gaps = 48/341 (14%)
Query: 44 EGSQLHWLGCSLYVSCRKATVPTVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWAD 103
+G LHWL C+LYV+CRK+ VPTV S +EGN V LT +L+ ++SL QF +K +KW D
Sbjct: 1 QGEALHWLACALYVACRKSRVPTVGSG-LMEGNGVSLTRILRSARLSLIQFFSKMKKWMD 59
Query: 104 MRKLPDSFRSKIARLERNFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCT 163
M LP FR ++ RLERNF VS VIF K+ P+F ++F+ P +E +R K++ + C
Sbjct: 60 MSNLPQEFRERVERLERNFEVSTVIFKKFEPIFLDIFQNP-YEETSKPLRSRKQRRVPCG 118
Query: 164 STKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCDLIYANVIQ-SKLRDIVNPDFEG 222
+ +F F W LFV TK + + +DLVNS+HLL+ DLI+AN + RD++NP F+G
Sbjct: 119 AKDLFNFCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANALLCPNRRDLLNPSFKG 178
Query: 223 MPSNFLDSHFAPLDDPPCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDS 282
+P F + D PCII+ LC+ HDG +V+ + E
Sbjct: 179 LPVGFHATEIKASADAPCIIAALCELHDGL---------------LVEAKGIKEHYFKPY 223
Query: 283 LAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILS 342
+A + + + K +L+ NF N K +NK YEEY+L+
Sbjct: 224 IAKLFDRKILKG----------------------ECLLDLCNFTENNKALNKEYEEYVLT 261
Query: 343 VGDFDERIFLPKFQSFDETAPGSSGPGLDDLSPAPAPGGAP 383
VGDFDER+FL A G PA P G P
Sbjct: 262 VGDFDERVFL--------GADAEEEIGTPRKFPADVPVGKP 294
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 11/71 (15%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIED 315
V++R+E LSRD+VKHLN EEQ+L+SLAW +S LW ++ S ++P CE+
Sbjct: 488 VLIRSEEGLSRDMVKHLNSIEEQILESLAWTRDSALWSALQASENKVPTCEE-------- 539
Query: 316 LSAILEPENFD 326
++ P NF+
Sbjct: 540 ---VIFPSNFE 547
>gi|242008733|ref|XP_002425155.1| P107, putative [Pediculus humanus corporis]
gi|212508849|gb|EEB12417.1| P107, putative [Pediculus humanus corporis]
Length = 842
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 109/234 (46%), Positives = 150/234 (64%), Gaps = 7/234 (2%)
Query: 6 DNETAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVP 65
D T +H +LC +LN+D A +AW +Y M +YTLEG QLHWL C+LYV+CR++ P
Sbjct: 7 DQVTYERHHKLCTSLNMDKAAADDAWKSYLGMKQNYTLEGDQLHWLCCALYVACRRSQTP 66
Query: 66 TV-NSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAV 124
T+ N IEGNLV LT LL+ C +SL QF KC+KWADM LP FRSK LER + V
Sbjct: 67 TLGNPPIFIEGNLVSLTRLLRQCNLSLIQFFKKCKKWADMANLPKEFRSKFDHLERKYEV 126
Query: 125 SKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLD 184
SKVIF +Y MF ++F P E+ H + K + C+S+++F F W L++ K +
Sbjct: 127 SKVIFIRYKQMFLDIFNEPT-PEIYQH-KSKKPRNFPCSSSRLFNFCWTLYITIKGSFTA 184
Query: 185 VSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDP 238
V+ DLV+S+HLL+A CDL+Y+N + + +D++NP FEG D+ F L DP
Sbjct: 185 VAVDLVSSYHLLLACCDLMYSNALLANRKDLLNPKFEGNA----DAGFTSLLDP 234
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Query: 308 KLRGNIE-DLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
K GN + +++L+P F+ NFK +NK+Y++Y LSVG+FDERIFL
Sbjct: 219 KFEGNADAGFTSLLDPLYFESNFKEINKVYDKYTLSVGEFDERIFL 264
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 36/54 (66%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKL 309
+++R E L R IVK+L++ EE +L++L W ++SPLW +++ IP CE L
Sbjct: 470 MVLRTEDQLPRVIVKYLSMVEENILETLVWQNSSPLWIALKNESTTIPKCEDVL 523
>gi|196011866|ref|XP_002115796.1| hypothetical protein TRIADDRAFT_59859 [Trichoplax adhaerens]
gi|190581572|gb|EDV21648.1| hypothetical protein TRIADDRAFT_59859 [Trichoplax adhaerens]
Length = 960
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 138/400 (34%), Positives = 212/400 (53%), Gaps = 58/400 (14%)
Query: 6 DNETAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVP 65
D ++ ELC++LN+D TA+ AW Y+++ +TLEG+ LHWL C+L+V+ +++ +P
Sbjct: 11 DRPIRSEYDELCLSLNMDKDTAQTAWQRYQDIKLKFTLEGNHLHWLTCALFVAGKQSRLP 70
Query: 66 TVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVS 125
TV + GN + L+ L+K +SL +F NK KW DM L + FR +I +ERNF V
Sbjct: 71 TVGEGIQV-GNCISLSRLIKAANLSLIEFFNKIDKWIDMACLDEDFRGQINVIERNFEVV 129
Query: 126 KVIF-TKYLPMFKEMFKPPDLDEL-LMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYL 183
VI+ K+ P+F+ +F+ D + +RH+K CT +VF + W L++L K +Y
Sbjct: 130 SVIYKNKFEPIFQHLFQSNVNDSVPRRKLRHSKI----CTYQQVFSYCWSLYLLIKGKYP 185
Query: 184 DVSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIIS 243
D+ DLVNS+HLL+ DLIYAN++ + RD++NP E +S+ +P+ +I
Sbjct: 186 DIRTDLVNSYHLLLCCIDLIYANIVVANRRDLLNPQLESDALVESESNSSPVS----VIE 241
Query: 244 ILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIP 303
LCK ++G + V + I +HL LW +E+
Sbjct: 242 YLCKRYEGISIEV---------KAIKQHL------------------LWLYLENLFD--- 271
Query: 304 GCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFLPKFQSFDETAP 363
+ LRGN + +L+ NFDYN K V+ Y+E++LS GDFDERIFL
Sbjct: 272 --KNHLRGNKKTFCGLLDQGNFDYNNKFVSNSYDEFVLSSGDFDERIFL----------- 318
Query: 364 GSSGPGLDDLSPAPAPGGAPPEVDFGIDFTSFRRNLRQKL 403
S LD +PA P A + + T RNL+ +
Sbjct: 319 -GSNAYLDIGTPAKLPKAAHTTAEARQNVT---RNLQDRF 354
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
+++R E L R++VKHLN EE +LD LAWVS SPL+ ++ IP E+
Sbjct: 533 IVIRTEHGLPREVVKHLNYIEESILDHLAWVSGSPLFTASDNGLIAIPSYEE 584
>gi|157112868|ref|XP_001657652.1| P130 [Aedes aegypti]
gi|108884618|gb|EAT48843.1| AAEL000128-PA, partial [Aedes aegypti]
Length = 748
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 125/356 (35%), Positives = 193/356 (54%), Gaps = 40/356 (11%)
Query: 1 MGQLADNETAH-QHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSC 59
M +++ E +H+++C LNID+ T +++WN++++ Y L+ QLHWL CSL+++C
Sbjct: 1 MTNMSEGEKLRTEHRDICGQLNIDAATEEQSWNSFQDTQKTYNLDVDQLHWLCCSLFITC 60
Query: 60 RKATVPTV-NSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARL 118
RK PTV N+N + GN V +T LL+ CK++LN+F K +W +M P+ R+ I+ L
Sbjct: 61 RKKVTPTVGNTNSVLHGNCVSMTRLLRLCKINLNEFFKKINQWMEMTSQPEDCRNAISSL 120
Query: 119 ERNFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLT 178
+ NF V+ I+ KY MF MF P +E R K K CTS ++ +F W LF+
Sbjct: 121 QHNFIVTMSIYQKYRDMFPSMFVAPCEEE---QRRGKKSKPQPCTSGQLNKFCWKLFICA 177
Query: 179 KAEYLDVSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDP 238
K+EY D + DLV S+++L+ DL+YANVI D+VNP FEG+P +F+ P +P
Sbjct: 178 KSEYPDQNGDLVKSYNMLLCCLDLVYANVIAEGRTDLVNPAFEGLPKDFISQGVIP-PEP 236
Query: 239 PCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDS 298
CII + D C VI+ ++ + ++ T N+
Sbjct: 237 VCIIEHI--KEDNCS-SVIMDMRETIWKSTIQQFCQT------------------NV--- 272
Query: 299 GQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFLPK 354
LRGN E L ++ NF++N K ++ Y +ILS G+FDE I L +
Sbjct: 273 ----------LRGNSETLMELITVANFEFNLKSLDTTYNTFILSYGEFDESIALEQ 318
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 15/73 (20%)
Query: 235 LDDPPCI----ISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSP 290
D PP I I ++ HH+ LSR+I KHL++ E Q ++SL W SNSP
Sbjct: 480 FDMPPFIFYRIIELVMMHHNDL-----------LSREITKHLDIIENQCIESLCWQSNSP 528
Query: 291 LWKNIEDSGQEIP 303
LW+ +E+ G P
Sbjct: 529 LWRAMENIGYRAP 541
>gi|213982839|ref|NP_001135587.1| retinoblastoma-like 1 (p107) [Xenopus (Silurana) tropicalis]
gi|195539849|gb|AAI68105.1| Unknown (protein for MGC:186044) [Xenopus (Silurana) tropicalis]
Length = 1048
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 131/343 (38%), Positives = 188/343 (54%), Gaps = 46/343 (13%)
Query: 12 QHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNR 71
Q + LC LN+D T E + Y+LEG HWL C+LY +CRK +PTV
Sbjct: 25 QLETLCRELNLDQETGAETIRDFTRTWSTYSLEGEVKHWLACALYAACRKGVIPTVGKG- 83
Query: 72 TIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTK 131
+EGN V LT +L+ K+SL QF NK +KW DM LP FR ++ RLERNF V+ VIF K
Sbjct: 84 IMEGNGVSLTRILRSAKLSLIQFFNKMKKWIDMSNLPQEFRERVERLERNFEVATVIFKK 143
Query: 132 YLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVN 191
+ P+F+E+F+ P +E R K++ + C++ +F F W LFV +K + + +DLVN
Sbjct: 144 FEPIFREIFQNPH-EEPPRLPRSRKQRRLQCSAKDLFSFCWTLFVYSKGNFCLIGDDLVN 202
Query: 192 SFHLLIATCDLIYANVIQ-SKLRDIVNPDFEG-MPSNFLDSHFAPLDDPPCIISILCKHH 249
S+HLL+ DLIYA+V+Q D++NP F +P+ LD +D PCII LC+ +
Sbjct: 203 SYHLLLCCLDLIYAHVLQCPNKEDLLNPSFTAKLPA--LDPSS---EDAPCIIRALCELY 257
Query: 250 DGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKL 309
DG + V A+ I +H P + D ++ L
Sbjct: 258 DG----IFVEAKG-----IKEHY---------------FKPYISKLYD--------KKIL 285
Query: 310 RGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+G + +L+ +F N K +NK YEEY+L+ GDFDER+FL
Sbjct: 286 KG-----ACLLDVSSFTDNNKSLNKEYEEYVLTKGDFDERVFL 323
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +R+E LSRD+VKHLN EEQ+L+S AW S+S LW ++ D+ +P CE+
Sbjct: 540 VFIRSEDGLSRDMVKHLNTIEEQILESRAWTSDSVLWVHL-DAVDNVPTCEE 590
>gi|55727032|emb|CAH90273.1| hypothetical protein [Pongo abelii]
Length = 1097
Score = 214 bits (544), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 128/338 (37%), Positives = 173/338 (51%), Gaps = 77/338 (22%)
Query: 15 ELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTIE 74
ELC LN+D EAW++Y+ MS YTLEG+ LHWL C+LYV+CRK +VPTV S T+E
Sbjct: 51 ELCSRLNMDEAARAEAWDSYRSMSESYTLEGNDLHWLACALYVACRK-SVPTV-SKGTVE 108
Query: 75 GNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLP 134
GN V LT +LK + SL +F NK +KW DM LP FR + RLERNF VS VIF +Y P
Sbjct: 109 GNYVSLTRILKCSEQSLIEFFNKMKKWEDMANLPPHFRERTERLERNFTVSAVIFKRYEP 168
Query: 135 MFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFH 194
+F+++FK P +E R K++ CT +++F F+W+ F+ K
Sbjct: 169 IFQDIFKYPQ-EEQPRQQRGRKQRRRPCTVSEIFHFSWVPFIYAK--------------- 212
Query: 195 LLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGCKL 254
G+ +F P DPPCII LC HDG L
Sbjct: 213 ---------------------------GLSEDFHAKDSKPSSDPPCIIEKLCSLHDGLVL 245
Query: 255 CVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIE 314
++ I +H W P + + + ++ L+G E
Sbjct: 246 ---------EAKGIKEHF------------W---KPYIRKLYE--------KKLLKGKEE 273
Query: 315 DLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+L+ LEP NF +FK +NK YEEY+LSVG+ DERIFL
Sbjct: 274 NLTGFLEPGNFGESFKAINKAYEEYVLSVGNLDERIFL 311
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW SPLW+ I D+ +P CE+
Sbjct: 527 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWEKIRDNENRVPTCEE 578
>gi|1185008|gb|AAC52555.1| Rb-related p130 [Mus musculus]
Length = 1092
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 127/346 (36%), Positives = 178/346 (51%), Gaps = 77/346 (22%)
Query: 7 NETAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPT 66
++ + +ELC LN+D EAW++Y+ MS YTLEG+ LHWL C+LYV+CRK +VPT
Sbjct: 40 HQIQQRFEELCSRLNMDEAARAEAWSSYRSMSESYTLEGNDLHWLACALYVACRK-SVPT 98
Query: 67 VNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSK 126
V S T EGN V LT +L+ + SL +F NK +KW DM LP FR + RLERNF VS
Sbjct: 99 V-SKGTAEGNYVSLTRILRCSEQSLIEFFNKMKKWEDMANLPPHFRERTERLERNFTVSA 157
Query: 127 VIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVS 186
VIF KY P+F+++FK P +E R K++ CT++++F F W+LF+ K
Sbjct: 158 VIFKKYEPIFQDIFKYPQ-EEQPRQQRGRKQRRQPCTTSEIFHFCWVLFIYAKG------ 210
Query: 187 NDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILC 246
L + +P DS + DPPC+I LC
Sbjct: 211 -------------------------LSEDCHPK---------DSKAS--SDPPCVIEKLC 234
Query: 247 KHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCE 306
HDG L ++ I +H W P + + + +
Sbjct: 235 SLHDGLVL---------EAKGIKEHF------------W---KPYIRKLFE--------K 262
Query: 307 QKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+ L+G E+L+ LEP NF +FK VNK YEEY+L+ G+ DER+FL
Sbjct: 263 KLLKGKEENLTGFLEPGNFGESFKAVNKAYEEYVLAPGNLDERVFL 308
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW + SPLW I D+ +P CE+
Sbjct: 524 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKTKSPLWDRIRDNENRVPTCEE 575
>gi|170065187|ref|XP_001867835.1| retinoblastoma-family protein [Culex quinquefasciatus]
gi|167882287|gb|EDS45670.1| retinoblastoma-family protein [Culex quinquefasciatus]
Length = 933
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 113/309 (36%), Positives = 174/309 (56%), Gaps = 39/309 (12%)
Query: 45 GSQLHWLGCSLYVSCRKATVPTV-NSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWAD 103
G LHWL C+++V+CR+ PTV N N ++GN V LT LL+ C ++L++F K +W +
Sbjct: 4 GDLLHWLCCTVFVTCRQTVTPTVGNRNAVLQGNCVSLTRLLRLCGINLHEFFTKIGQWVE 63
Query: 104 MRKLPDSFRSKIARLERNFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCT 163
M LP+ R+ I L+ +F VS VI+ K+ +F +F+PP+ DE R K K + C+
Sbjct: 64 MASLPEENRTAINTLQHSFKVSMVIYGKFCELFTLVFRPPNQDE---QKRSKKSKPVPCS 120
Query: 164 STKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGM 223
+ ++ EF W LF+ K EY + S D+V S ++++ DL+Y+N I RDIVNPDFEG+
Sbjct: 121 TNRLHEFCWTLFIYAKHEYPEQSADVVTSCNMMLCCLDLVYSNAIADGRRDIVNPDFEGL 180
Query: 224 PSNFLDSHFAPLDDPPCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSL 283
P++F+ PL +P CII L +EA+ S S
Sbjct: 181 PADFIAEGRIPL-EPLCIIEAL--------------SEANCS----------------SE 209
Query: 284 AWVSNSPLWKNIEDSGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSV 343
A V+ + +WK++ ++ + LRG+ + ++ NFD NFK +N Y+ +ILS
Sbjct: 210 ALVTKNTIWKDVIETLFQT----NVLRGDANSFTGLISLANFDENFKSLNSRYDTFILSC 265
Query: 344 GDFDERIFL 352
G+FDERI L
Sbjct: 266 GEFDERIAL 274
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEI 302
VI+ LSRD++KHL + EEQ L+SL+W S+SPLW +++ E+
Sbjct: 467 VILYHNDLLSRDLIKHLTIIEEQCLESLSWQSSSPLWTVMDNIKYEV 513
>gi|47211930|emb|CAF96000.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1311
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 130/365 (35%), Positives = 183/365 (50%), Gaps = 75/365 (20%)
Query: 3 QLADNETAHQHQE------LCMALNIDSTTAKEAWNAYKE-MSHHYTLEGSQL------- 48
Q A + A Q +E + +AL+I+ T ++ ++ + H L L
Sbjct: 358 QRAKQDMARQLREYQDLMNVKLALDIEIATYRKLLEGEEDRLGQHSVLNIQTLSNFSEVV 417
Query: 49 HWLGCSLYVSCRKATVPTVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLP 108
HWL CSLY +CRK + PTV +EGN V LT +L+ ++SL QF +K RKWADM L
Sbjct: 418 HWLACSLYAACRKGSTPTVGKG-LMEGNCVSLTRILRSSRLSLIQFFSKMRKWADMSNLS 476
Query: 109 DSFRSKIARLERNFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVF 168
FR ++ +LERNF VS VIF K LP C ++ VF
Sbjct: 477 QDFRLRLKQLERNFEVSMVIFRKRLP---------------------------CHTSDVF 509
Query: 169 EFTWILFVLTKAEYLDVSNDLVNSFHLLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNF 227
F W LFV K + + +DLVNS+HLL+ DL++ N + S +++VNP F+G +
Sbjct: 510 RFCWTLFVYAKGNFCMIGDDLVNSYHLLLCCLDLVFGNALLCSNRKELVNPSFKGGSFGY 569
Query: 228 LDSHFAPLDDPPCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVS 287
A LD PPC++ LC+ HDG ++V A + I +H Q L
Sbjct: 570 PADGHAALDQPPCVLERLCELHDG----LVVEA-----KGIKQHYFRPYIQKL------- 613
Query: 288 NSPLWKNIEDSGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFD 347
K I L+G E L+ +L+P+NF N K +NK YEEY+L+VGDFD
Sbjct: 614 ---FEKKI-------------LKGKEEHLTQLLDPQNFLENNKALNKEYEEYVLTVGDFD 657
Query: 348 ERIFL 352
ER+FL
Sbjct: 658 ERVFL 662
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 37/52 (71%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +R+E LSRD+VKHLN EEQVL+S AW +S LW ++ +G ++P E+
Sbjct: 871 VFIRSEEGLSRDMVKHLNQIEEQVLESQAWSRDSALWGALQAAGSKVPSVEE 922
>gi|71896991|ref|NP_001026501.1| retinoblastoma-like protein 2 [Gallus gallus]
gi|53135898|emb|CAG32467.1| hypothetical protein RCJMB04_26c5 [Gallus gallus]
Length = 470
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 123/331 (37%), Positives = 168/331 (50%), Gaps = 77/331 (23%)
Query: 22 IDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTIEGNLVCLT 81
+D EAW +Y+ M +YTLEG++LHWL C+LYV+CRKA +PTV S T+EGN V LT
Sbjct: 1 MDERARSEAWLSYQSMKRNYTLEGNELHWLACALYVACRKA-IPTV-SRGTVEGNYVSLT 58
Query: 82 SLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLPMFKEMFK 141
+L+ + SL +F NK +KW DM LP FR + RLERNF VS VIF KY P+F+++F+
Sbjct: 59 RILRCSEQSLIEFFNKMKKWEDMANLPSQFRERTERLERNFTVSAVIFKKYEPIFQDIFR 118
Query: 142 PPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCD 201
P D+ K++ CT T+VF+F W+LFV K
Sbjct: 119 YPQEDQPRQQR-GRKQRRQPCTVTEVFQFCWVLFVHAK---------------------- 155
Query: 202 LIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGCKLCVIVRAE 261
G+P +F + DPPCII LC H G L
Sbjct: 156 --------------------GLPEDFHSKDYKVSSDPPCIIEKLCSLHYGLVL------- 188
Query: 262 ASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIEDLSAILE 321
++ I +H W P + + D ++ L+G E+L+ L+
Sbjct: 189 --EAKGIKEHF------------W---KPYIRKLFD--------KKLLKGKDENLTGFLD 223
Query: 322 PENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
P NF +FK +NK YEEY+LSVG+ DERIFL
Sbjct: 224 PGNFGDSFKAINKAYEEYVLSVGNLDERIFL 254
>gi|427785401|gb|JAA58152.1| Putative rb retinoblastoma tumor suppressor-related protein
[Rhipicephalus pulchellus]
Length = 998
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 119/351 (33%), Positives = 177/351 (50%), Gaps = 37/351 (10%)
Query: 5 ADNETAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATV 64
D E QE+C +LN+D T+ +A N Y+ +S +YTLEG+ HW+ C+LYV CR V
Sbjct: 7 GDQEVRACFQEVCSSLNMDRLTSDQALNTYENISMNYTLEGNMRHWIACALYVECRNGNV 66
Query: 65 PTVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAV 124
PTV IEGN V LT LL C++SL F K +KWADM L + R +I +E++F V
Sbjct: 67 PTVAQTSRIEGNCVSLTRLLSICRISLLDFFTKMKKWADMANLNERMRQRIETIEKSFCV 126
Query: 125 SKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKM---IHCTSTKVFEFTWILFVLTKAE 181
+ I+ KY+ +F +FK ++ K+++ C+S +F F W L+V K
Sbjct: 127 TAKIYEKYVQIFTSVFKEHQTTAQRRSIKAVKRRVHRPTQCSSNDMFHFIWTLYVYIKGR 186
Query: 182 YLDVSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCI 241
+ + DLVN +HLL+ D Y + +K D+++P F + L D I
Sbjct: 187 FSAICCDLVNCYHLLLCCIDYGYCAALAAKRTDLLDPKFYEAQQDKLKKDSDNQD--VGI 244
Query: 242 ISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQE 301
I L K HDG N + VL + + P+ + +E
Sbjct: 245 IRELVKSHDG---------------------NFEDASVLKAHHF--RHPIQQLME----- 276
Query: 302 IPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
E+ L G+++ L+ L+P FD + K +NK YEE +L G+ DERIFL
Sbjct: 277 ----EKILHGDMKTLALCLDPVAFDTSIKKLNKTYEEGVLKEGELDERIFL 323
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 38/53 (71%)
Query: 257 IVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKL 309
++RAE L R++VKHLN EEQ+L+ L+W +SPLW IE S Q +P C++ L
Sbjct: 539 LIRAEEGLWREVVKHLNHIEEQILECLSWKDDSPLWDAIEHSEQPVPTCKEVL 591
>gi|149043122|gb|EDL96696.1| rCG32239, isoform CRA_b [Rattus norvegicus]
Length = 835
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/281 (41%), Positives = 162/281 (57%), Gaps = 39/281 (13%)
Query: 73 IEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKY 132
+EGN V LT +L+ K+SL QF +K +KW DM LP FR +I RLERNF VS VIF K+
Sbjct: 1 MEGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFKKF 60
Query: 133 LPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNS 192
P+F ++F+ P +EL R K++ I C+ +F F W LFV TK + + +DLVNS
Sbjct: 61 EPIFLDIFQNP-YEELPKLPRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVNS 119
Query: 193 FHLLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDG 251
+HLL+ DLI+AN I RD++NP F+G+PS+F +F ++PPCII++LC HDG
Sbjct: 120 YHLLLCCLDLIFANAIMCPNRRDLLNPSFKGLPSDFHAVNFKAAEEPPCIIAVLCDLHDG 179
Query: 252 CKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRG 311
++V A + I +H P + D ++ L+G
Sbjct: 180 ----LLVEA-----KGIKEHY---------------FKPYISKLFD--------KKILKG 207
Query: 312 NIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+L+ +F N K VNK YEEY+L+VGDFDERIFL
Sbjct: 208 E-----CLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFL 243
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 42/57 (73%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGN 312
V++R+E LSRD+VKHLN EEQ+L+SLAW +NS LW+ + S ++P CE+ + N
Sbjct: 460 VVIRSEEGLSRDMVKHLNSIEEQILESLAWTNNSALWEALRASANKVPSCEEVIFPN 516
>gi|149043121|gb|EDL96695.1| rCG32239, isoform CRA_a [Rattus norvegicus]
Length = 984
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/281 (41%), Positives = 162/281 (57%), Gaps = 39/281 (13%)
Query: 73 IEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKY 132
+EGN V LT +L+ K+SL QF +K +KW DM LP FR +I RLERNF VS VIF K+
Sbjct: 1 MEGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIFKKF 60
Query: 133 LPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNS 192
P+F ++F+ P +EL R K++ I C+ +F F W LFV TK + + +DLVNS
Sbjct: 61 EPIFLDIFQNP-YEELPKLPRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVNS 119
Query: 193 FHLLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDG 251
+HLL+ DLI+AN I RD++NP F+G+PS+F +F ++PPCII++LC HDG
Sbjct: 120 YHLLLCCLDLIFANAIMCPNRRDLLNPSFKGLPSDFHAVNFKAAEEPPCIIAVLCDLHDG 179
Query: 252 CKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRG 311
++V A+ I +H P + D ++ L+G
Sbjct: 180 ----LLVEAKG-----IKEHY---------------FKPYISKLFD--------KKILKG 207
Query: 312 NIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+L+ +F N K VNK YEEY+L+VGDFDERIFL
Sbjct: 208 E-----CLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFL 243
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 40/52 (76%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++R+E LSRD+VKHLN EEQ+L+SLAW +NS LW+ + S ++P CE+
Sbjct: 460 VVIRSEEGLSRDMVKHLNSIEEQILESLAWTNNSALWEALRASANKVPSCEE 511
>gi|344241870|gb|EGV97973.1| Retinoblastoma-like protein 1 [Cricetulus griseus]
Length = 984
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 116/281 (41%), Positives = 160/281 (56%), Gaps = 39/281 (13%)
Query: 73 IEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKY 132
+EGN V LT +L+ K+SL QF +K +KW DM LP FR +I RLERNF VS VIF K+
Sbjct: 1 MEGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRDRIERLERNFEVSTVIFKKF 60
Query: 133 LPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNS 192
P+F ++F+ P +EL R K++ I C+ +F F W LFV TK + + +DLVNS
Sbjct: 61 EPIFLDIFQNP-YEELPKLPRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVNS 119
Query: 193 FHLLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDG 251
+HLL+ DLI+AN I RD++NP F+G+PS+F F +PPCII++LC HDG
Sbjct: 120 YHLLLCCLDLIFANAIMCPNRRDLLNPSFKGLPSDFHAPDFKAAQEPPCIIAVLCDLHDG 179
Query: 252 CKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRG 311
++V A+ I +H P + D ++ L+G
Sbjct: 180 ----LLVEAKG-----IKEHY---------------FKPYISKLFD--------KKILKG 207
Query: 312 NIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+L+ +F N K VNK YEEY+L+VGDFDERIFL
Sbjct: 208 E-----CLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFL 243
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 40/52 (76%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++R+E LSRD+VKHLN EEQ+L+SLAW SNS LW+ + S ++P CE+
Sbjct: 460 VVIRSEEGLSRDMVKHLNSIEEQILESLAWSSNSALWEALHASVNKVPTCEE 511
>gi|195131539|ref|XP_002010208.1| GI14825 [Drosophila mojavensis]
gi|193908658|gb|EDW07525.1| GI14825 [Drosophila mojavensis]
Length = 802
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 118/344 (34%), Positives = 179/344 (52%), Gaps = 47/344 (13%)
Query: 11 HQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNS- 69
+ + LC LN+D T EA+ KE+ HY+LEG LHW C+L+V+CR++T PTV
Sbjct: 10 QKFESLCRDLNMDIKTESEAFKMLKEVLKHYSLEGEILHWFCCALFVACRQSTTPTVGGQ 69
Query: 70 NRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIF 129
N + GN V L +LL+ C+MS+ +F K + W DM +P +F ++ LER F+++ I+
Sbjct: 70 NAVVMGNCVPLNNLLRCCQMSIYEFKKKIKLWCDMANMPHTFAQQMEELERKFSITFTIY 129
Query: 130 TKYLPMFKEMFK-PPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSND 188
KY +F ++F PP+ N K C+ K+ + W LF+ K + + D
Sbjct: 130 KKYRDIFDQVFLCPPN--------EKNHSKNSKCSYIKLDDICWRLFLCAKNQKPTTTLD 181
Query: 189 LVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPP-CIISILCK 247
LV S++L++ DLIYANV+ K D++NP FEG+PSN+ F CI++ C+
Sbjct: 182 LVTSYNLMMCCIDLIYANVLAEKRTDLINPKFEGLPSNWNSPDFDETQARNHCILAYFCE 241
Query: 248 HHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
D K +A++ R+I+ T V
Sbjct: 242 MTDEAK-----DMKATVFRNIMDSFFQTNTVV---------------------------- 268
Query: 308 KLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIF 351
GN E L ++ +NF+ NFK +N YE+Y+LSVG+FDERI
Sbjct: 269 ---GNKETLLGLISNKNFERNFKSLNISYEQYVLSVGEFDERIL 309
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 261 EASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPG 304
E L+R +VKHLN EE L+ L W NSP W+ I+ + + +PG
Sbjct: 502 EGCLTRSLVKHLNSIEETCLERLVWKRNSPFWEMIDHAPKPLPG 545
>gi|194768441|ref|XP_001966320.1| GF22059 [Drosophila ananassae]
gi|190617084|gb|EDV32608.1| GF22059 [Drosophila ananassae]
Length = 854
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 116/358 (32%), Positives = 188/358 (52%), Gaps = 44/358 (12%)
Query: 9 TAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTV- 67
T ++ LC LNID T K+ + + E+S +LEG HWLGC+L+ +CR+++ PTV
Sbjct: 28 TKAKYNNLCRELNIDRQTEKDGYQMFHEVSQRCSLEGEFPHWLGCALFAACRQSSTPTVI 87
Query: 68 NSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKV 127
+ + GN V L +LL+ C+MS+ F K ++W DM LP F ++I LER F+++
Sbjct: 88 GQDAVVRGNCVSLNNLLRCCQMSIYDFKTKIKQWCDMANLPQEFVNEIEVLERRFSITFT 147
Query: 128 IFTKYLPMFKEMFK-PPDLDELLMHVRHNKKKM-IHCTSTKVFEFTWILFVLTKAEYLDV 185
++ +Y +F ++F PP+ + ++ N + C+ K+ + TW LF+ K +
Sbjct: 148 LYKRYRSIFDQLFTCPPNEKKPSKYISLNSSRAHGKCSYIKLDDITWRLFLCAKNQKPST 207
Query: 186 SNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISIL 245
+ DLV SF+L+I DLIY NV+ K D++NP FEG+P+N+++ F
Sbjct: 208 TVDLVTSFNLMICCIDLIYNNVLSEKRADLINPKFEGLPANWMEQDF------------- 254
Query: 246 CKHHDGCKLCVIVRAEASLSRDIVKHL-NLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPG 304
+H C I+ H ++TEE A + ++ I S +
Sbjct: 255 -RHQQHC---------------ILDHFCDMTEE------ARAMKATTFREIISSFMQT-- 290
Query: 305 CEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFLPKFQSFDETA 362
+ G + + +L ENF+ N K +N YE+Y+LSVG+FDERI L + + D T
Sbjct: 291 --STIYGQRDTMLGLLANENFERNLKSLNISYEQYVLSVGEFDERI-LSAYDAGDHTG 345
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 12/64 (18%)
Query: 241 IISILCKHHD-GCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSG 299
II I+ +H GC L+R ++KHLN EE L+ LAWVSNSPLW I +
Sbjct: 516 IIEIVVRHGSHGC-----------LTRSLIKHLNSVEETCLEQLAWVSNSPLWTMISSAS 564
Query: 300 QEIP 303
+P
Sbjct: 565 SPLP 568
>gi|241174272|ref|XP_002410999.1| cell cycle regulator p107, putative [Ixodes scapularis]
gi|215495086|gb|EEC04727.1| cell cycle regulator p107, putative [Ixodes scapularis]
Length = 1064
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 115/343 (33%), Positives = 168/343 (48%), Gaps = 39/343 (11%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
+E+C++LNI+ T EA+ Y+ +S +YTLEG Q HW+ C+LYV CR TV +
Sbjct: 12 REVCVSLNINPATRDEAFRIYESISMNYTLEGKQFHWIACALYVECRNGNTRTVGHKSCV 71
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
GN V LT LL C +SL F K +KWADM L D R ++ +E++F V+ I+ KY
Sbjct: 72 AGNCVSLTRLLSTCDISLLDFFTKMKKWADMTNLDDLMRRRLETIEKSFCVTAKIYEKYT 131
Query: 134 PMFKEMFKPPDLD---ELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLV 190
+F +FK P D + + K+ CTS+ VF F W L+V K + +S+DLV
Sbjct: 132 AIFSAVFKEPSQDAPKQASTGYKRRTSKLPPCTSSDVFNFLWTLYVYIKGRFSQISSDLV 191
Query: 191 NSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPC-IISILCKHH 249
N +HLL+ D Y + +K D++N DF ++ L+ D+ II L +H
Sbjct: 192 NCYHLLLCCIDYGYCTAVSAKRTDLLNQDFY---TSQLEKAGEDCDNEDVGIIRELVNNH 248
Query: 250 DGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKL 309
DG V R I K + E L
Sbjct: 249 DGSYEDASVLRAHHFKRPIGKLM--------------------------------AENVL 276
Query: 310 RGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+G+I+ L+ LEP F+ + + ++K YEE L G+ DERIF
Sbjct: 277 QGDIKTLTLSLEPSAFNNSSRKLDKTYEERFLEEGELDERIFF 319
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 39/53 (73%)
Query: 257 IVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKL 309
++RAE L R++VKHLN TEEQ+L+ LAW SPLW+ IE S Q +P C++ L
Sbjct: 534 LIRAEEGLWREVVKHLNRTEEQILECLAWKEESPLWEAIEHSAQSVPTCKEVL 586
>gi|254972110|gb|ACT98283.1| rb-like protein [Schmidtea mediterranea]
Length = 1019
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 115/351 (32%), Positives = 186/351 (52%), Gaps = 45/351 (12%)
Query: 6 DNETAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVP 65
+ + + ++LC+ L I+ST +EAW+ YKE+S +Y ++G QL WL C+LY RK+T
Sbjct: 12 EEQLGKRFEDLCVDLCIESTVKEEAWDKYKEVSTNYCIDGDQLQWLVCALYECVRKSTTD 71
Query: 66 TVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVS 125
+NS ++ V L LL KMS QF ++ KWADM + + R +I R+E F+VS
Sbjct: 72 NINS---LDNTYVSLARLLSVSKMSFVQFFHRISKWADMVDMNEELRDRIERIESQFSVS 128
Query: 126 KVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDV 185
VIF KY+ F E+F+ +DE +K + CT ++F FTW+L++ K + +
Sbjct: 129 AVIFDKYITGFYEIFQK--IDESHGGQSMEEKFKVLCTDEELFRFTWLLYIKIKTNFPAI 186
Query: 186 SNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISIL 245
D++ SF LL+ T D I +N + SK + + N F G+PS+F + ++ + P ++ +
Sbjct: 187 CGDIILSFQLLLCTLDWIASNALISKSKQLFNSSFRGLPSDFHNRNWKAPERFPTVLKFI 246
Query: 246 CKHHD----GCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQE 301
C+ +D CK S R+ ++ L E++V
Sbjct: 247 CESNDMNYIDCK-----STRDSFFRNYIE--KLLEKEV---------------------- 277
Query: 302 IPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
I G E K ED +L NF++N + + +Y EY+++ GDFDERI+L
Sbjct: 278 IKGRETK-----ED--NVLSSVNFEFNSRGIMNLYGEYMMASGDFDERIYL 321
>gi|425876817|gb|AFY07415.1| retinoblastoma-like protein [Schmidtea mediterranea]
Length = 1034
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 115/351 (32%), Positives = 186/351 (52%), Gaps = 45/351 (12%)
Query: 6 DNETAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVP 65
+ + + ++LC+ L I+ST +EAW+ YKE+S +Y ++G QL WL C+LY RK+T
Sbjct: 12 EEQLGKRFEDLCVDLCIESTVKEEAWDKYKEVSTNYCIDGDQLQWLVCALYECVRKSTTD 71
Query: 66 TVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVS 125
+NS ++ V L LL KMS QF ++ KWADM + + R +I R+E F+VS
Sbjct: 72 NINS---LDNTYVSLARLLSVSKMSFVQFFHRISKWADMVDMNEELRDRIERIESQFSVS 128
Query: 126 KVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDV 185
VIF KY+ F E+F+ +DE +K + CT ++F FTW+L++ K + +
Sbjct: 129 AVIFDKYITGFYEIFQK--IDESHGGQSMEEKFKVLCTDEELFRFTWLLYIKIKTNFPAI 186
Query: 186 SNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISIL 245
D++ SF LL+ T D I +N + SK + + N F G+PS+F + ++ + P ++ +
Sbjct: 187 CGDIILSFQLLLCTLDWIASNALISKSKQLFNSSFRGLPSDFHNRNWKAPERFPTVLKFI 246
Query: 246 CKHHD----GCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQE 301
C+ +D CK S R+ ++ L E++V
Sbjct: 247 CESNDMNYIDCK-----STRDSFFRNYIE--KLLEKEV---------------------- 277
Query: 302 IPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
I G E K ED +L NF++N + + +Y EY+++ GDFDERI+L
Sbjct: 278 IKGRETK-----ED--NVLSSVNFEFNSRGIMNLYGEYMMASGDFDERIYL 321
>gi|195162391|ref|XP_002022039.1| GL14434 [Drosophila persimilis]
gi|198467719|ref|XP_001354481.2| GA20332 [Drosophila pseudoobscura pseudoobscura]
gi|194103937|gb|EDW25980.1| GL14434 [Drosophila persimilis]
gi|198149378|gb|EAL31534.2| GA20332 [Drosophila pseudoobscura pseudoobscura]
Length = 833
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 117/390 (30%), Positives = 192/390 (49%), Gaps = 62/390 (15%)
Query: 9 TAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTV- 67
T ++ LC LN+DS T ++ W Y ++ +EG L WL C L+ +CR+++ PTV
Sbjct: 28 TKAKYTNLCRELNMDSQTEEDGWAMYLDVRQRCVMEGDSLMWLCCCLFAACRRSSTPTVI 87
Query: 68 NSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKV 127
+ + GN V L +LL+ C+MS+ F K ++W DM LP F ++I L+R F+++
Sbjct: 88 GQDAVVRGNCVSLNNLLRCCQMSIYDFKTKIKQWCDMANLPQEFVNEIEVLDRKFSITFT 147
Query: 128 IFTKYLPMFKEMFK-PPDLDELLMHVRHNKKKMIH-------CTSTKVFEFTWILFVLTK 179
++ ++ +F ++F PP+ RH+K +H C+ K+ + W LF+ K
Sbjct: 148 LYKRFRNIFDKIFNCPPN------EKRHSKYISLHANHANGKCSYIKLDDICWRLFLCAK 201
Query: 180 AEYLDVSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPP 239
+ + DLV SF+L+I DLIY NV+ K D++NP F+G+P+N+ + F +P
Sbjct: 202 NQKPSTTVDLVTSFNLMICCIDLIYNNVLAEKRTDLINPKFDGLPNNWTEVDFKA--NPH 259
Query: 240 CIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSG 299
CI++ C + K +A+ R+I+ T
Sbjct: 260 CILTYFCDMTEEAKA-----MKATTFREIMSSFFQT------------------------ 290
Query: 300 QEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFLPKFQSFD 359
+ G+ +++ +L ENF+ N K +N YE+Y+LSVG+FDERI L + + D
Sbjct: 291 -------MTIYGHKDNMLGLLANENFERNLKSLNISYEQYVLSVGEFDERI-LSAYDASD 342
Query: 360 ET--------APGSSGPGLDDLSPAPAPGG 381
T P + DL PA G
Sbjct: 343 HTNLNDQALRPPVTPLTRKQDLPAQPAMAG 372
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 13/65 (20%)
Query: 241 IISILCKH--HDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDS 298
II I+ +H H+GC L+R ++KHLN EE L+ LAW SNSP+W I +
Sbjct: 515 IIEIVVRHGSHEGC-----------LNRYLIKHLNSIEETCLERLAWASNSPVWDMIATA 563
Query: 299 GQEIP 303
+ +P
Sbjct: 564 PKPLP 568
>gi|195564497|ref|XP_002105853.1| GD16459 [Drosophila simulans]
gi|194203216|gb|EDX16792.1| GD16459 [Drosophila simulans]
Length = 845
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 193/384 (50%), Gaps = 56/384 (14%)
Query: 12 QHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNS-N 70
++ LC LN+D T + + Y E+S ++EG+ HW+ C++Y +CR+ + PTV N
Sbjct: 31 EYTNLCRDLNMDRQTELQGYETYLEVSQRCSMEGTASHWMCCAIYTACRRTSTPTVTGQN 90
Query: 71 RTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFT 130
++GN V L +LL+ CKMS+ +F K ++W DM LP F ++I L+R F+++ ++
Sbjct: 91 AVVKGNCVSLNNLLRCCKMSIYEFKTKIKQWCDMANLPQEFVNEIEDLDRKFSITFMLHK 150
Query: 131 KYLPMFKEMFK-PPDLDE----LLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDV 185
++ + +F PP+ + + +H H K C+ K+ + W LF+ K +
Sbjct: 151 RFRIIMDMIFSCPPNEKKHSKYISLHGNHAHGK---CSYIKLDDICWRLFLCAKNQKPSN 207
Query: 186 SNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISIL 245
+ DLV SF+L+I DLIY NV+ K D++NP FEG+PSN+ + F +P CI+S
Sbjct: 208 TVDLVTSFNLMICCIDLIYNNVLAEKRTDLINPKFEGLPSNWTELDFR--HNPHCILSNF 265
Query: 246 CKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGC 305
C + K +A+ R Q++ S S
Sbjct: 266 CDMTEEAKA-----MKATTFR-----------QIMSSFFQAST----------------- 292
Query: 306 EQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFLPKFQSFDETA--- 362
+ GN + + +L ENF+ N K +N YE+Y+LSVG+FDERI L + + + TA
Sbjct: 293 ---IYGNKDTMLGLLANENFERNLKSLNISYEQYVLSVGEFDERI-LSAYDAGEHTALND 348
Query: 363 -----PGSSGPGLDDLSPAPAPGG 381
P + DL PA G
Sbjct: 349 QSLRPPVTPLTRKQDLPAQPAMAG 372
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 13/65 (20%)
Query: 241 IISILCKH--HDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDS 298
II I+ +H H+GC L+R ++KHLN EE L+ LAW NS +W I +
Sbjct: 515 IIEIVVRHGSHEGC-----------LNRSLIKHLNSIEETCLERLAWARNSTVWDMIASA 563
Query: 299 GQEIP 303
+P
Sbjct: 564 QLPLP 568
>gi|24638969|ref|NP_525036.2| Retinoblastoma-family protein [Drosophila melanogaster]
gi|85702751|sp|Q24472.2|RBF_DROME RecName: Full=Retinoblastoma family protein
gi|3702398|emb|CAA20903.1| EG:34F3.3 [Drosophila melanogaster]
gi|7290085|gb|AAF45551.1| Retinoblastoma-family protein [Drosophila melanogaster]
gi|19528311|gb|AAL90270.1| LD02906p [Drosophila melanogaster]
Length = 845
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 193/384 (50%), Gaps = 56/384 (14%)
Query: 12 QHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNS-N 70
++ LC LN+D T + + Y E+S ++EG+ HW+ C++Y +CR+ + PTV N
Sbjct: 31 EYTNLCRDLNMDRQTELQGYETYLEVSQRCSMEGTASHWMCCAIYTACRRTSTPTVTGQN 90
Query: 71 RTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFT 130
++GN V L +LL+ CKMS+ +F K ++W DM LP F ++I L+R F+++ ++
Sbjct: 91 AVVKGNCVSLNNLLRCCKMSIYEFKTKIKQWCDMANLPQEFVNEIEDLDRKFSITFMLHK 150
Query: 131 KYLPMFKEMFK-PPDLDE----LLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDV 185
++ + +F PP+ + + +H H K C+ K+ + W LF+ K +
Sbjct: 151 RFRIIMDMIFSCPPNEKKHSKYISLHGNHAHGK---CSYIKLDDICWRLFLCAKNQKPSN 207
Query: 186 SNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISIL 245
+ DLV S++L+I DLIY NV+ K D++NP FEG+PSN+ + F +P CI+S
Sbjct: 208 TVDLVTSYNLMICCIDLIYNNVLAEKRTDLINPKFEGLPSNWTELDFR--HNPHCILSNF 265
Query: 246 CKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGC 305
C + K +A+ R Q++ S S
Sbjct: 266 CDMTEEAKA-----MKATTFR-----------QIMSSFFQAST----------------- 292
Query: 306 EQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFLPKFQSFDETA--- 362
+ GN + + +L ENF+ N K +N YE+Y+LSVG+FDERI L + + + TA
Sbjct: 293 ---IYGNKDTMLGLLANENFERNLKSLNISYEQYVLSVGEFDERI-LSAYDAGEHTALND 348
Query: 363 -----PGSSGPGLDDLSPAPAPGG 381
P + DL PA G
Sbjct: 349 QSLRPPVTPLTRKQDLPAQPAMAG 372
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 13/65 (20%)
Query: 241 IISILCKH--HDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDS 298
II I+ +H H+GC L+R ++KHLN EE L+ LAW NS +W+ I +
Sbjct: 515 IIEIVVRHGSHEGC-----------LNRSLIKHLNSIEETCLERLAWARNSTVWEMIASA 563
Query: 299 GQEIP 303
+P
Sbjct: 564 QLPLP 568
>gi|1403032|emb|CAA65661.1| RBF [Drosophila melanogaster]
Length = 797
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 193/384 (50%), Gaps = 56/384 (14%)
Query: 12 QHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNS-N 70
++ LC LN+D T + + Y E+S ++EG+ HW+ C++Y +CR+ + PTV N
Sbjct: 31 EYTNLCRDLNMDRQTELQGYETYLEVSQRCSMEGTASHWMCCAIYTACRRTSTPTVTGQN 90
Query: 71 RTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFT 130
++GN V L +LL+ CKMS+ +F K ++W DM LP F ++I L+R F+++ ++
Sbjct: 91 AVVKGNCVSLNNLLRCCKMSIYEFKTKIKQWCDMANLPQEFVNEIEDLDRKFSITFMLHK 150
Query: 131 KYLPMFKEMFK-PPDLDE----LLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDV 185
++ + +F PP+ + + +H H K C+ K+ + W LF+ K +
Sbjct: 151 RFRIIMDMIFSCPPNEKKHSKYISLHGNHAHGK---CSYIKLDDICWRLFLCAKNQKPSN 207
Query: 186 SNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISIL 245
+ DLV S++L+I DLIY NV+ K D++NP FEG+PSN+ + F +P CI+S
Sbjct: 208 TVDLVTSYNLMICCIDLIYNNVLAEKRTDLINPKFEGLPSNWTELDFR--HNPHCILSNF 265
Query: 246 CKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGC 305
C + K +A+ R Q++ S S
Sbjct: 266 CDMTEEAKA-----MKATTFR-----------QIMSSFFQAST----------------- 292
Query: 306 EQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFLPKFQSFDETA--- 362
+ GN + + +L ENF+ N K +N YE+Y+LSVG+FDERI L + + + TA
Sbjct: 293 ---IYGNKDTMLGLLANENFERNLKSLNISYEQYVLSVGEFDERI-LSAYDAGEHTALND 348
Query: 363 -----PGSSGPGLDDLSPAPAPGG 381
P + DL PA G
Sbjct: 349 QSLRPPVTPLTRKQDLPAQPAMAG 372
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 13/65 (20%)
Query: 241 IISILCKH--HDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDS 298
II I+ +H H+GC L+R ++KHLN EE L+ LAW NS +W+ I +
Sbjct: 515 IIEIVVRHGSHEGC-----------LNRSLIKHLNSIEETCLERLAWARNSTVWEMIASA 563
Query: 299 GQEIP 303
+P
Sbjct: 564 QLPLP 568
>gi|353233249|emb|CCD80604.1| putative retinoblastoma-like protein [Schistosoma mansoni]
Length = 1131
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 185/362 (51%), Gaps = 52/362 (14%)
Query: 12 QHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNR 71
+ ++LC L ID + +EAW YK++ +Y+++G Q+ WL CSLY CR+ ++ +
Sbjct: 15 RFEDLCQDLCIDGSVREEAWEKYKDVWANYSIDGDQIQWLVCSLYECCRRCLSDGISGH- 73
Query: 72 TIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTK 131
++ V L+ LL KMS+ QF ++ RKWADM + D R +I +ER F+VS VIF
Sbjct: 74 -VDNAYVSLSRLLSAAKMSMVQFFHRIRKWADMTDMLDDMRDRIELIERQFSVSSVIFRN 132
Query: 132 YLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVN 191
+ F +F D + M T + +F FTW+LF+ ++A + V++DLVN
Sbjct: 133 FGRSFGVLFSDTDYETSQMRP----------TGSDLFRFTWLLFIKSRASFPAVTDDLVN 182
Query: 192 SFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFA------PLDDPPCIISIL 245
S+HLL D V+ S+ RD++N + G+P +FL S P D+P C++ +
Sbjct: 183 SYHLLACCLDWTLGAVMLSRRRDLINMEQNGLPRDFLTSVAQNKTWCPPHDEPTCMLRPI 242
Query: 246 CKHHDGCKL-CVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPG 304
C+ +D + C V+ R + L L E+ ++
Sbjct: 243 CEDNDVNYVECKTVKEH--FFRPFM--LRLIEKDLI------------------------ 274
Query: 305 CEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFLPKFQSFDETAPG 364
KL ++ L ++LE ENF+ + +N YEEYI+ GDFDERI+L S + + G
Sbjct: 275 ---KLHPSV--LGSLLEQENFEITIQNLNNNYEEYIIGTGDFDERIYLSPNASEEIGSIG 329
Query: 365 SS 366
S
Sbjct: 330 ES 331
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V+VR+ L R+IVK+LN E +LDS AW +NS +W ++ +G+ P E+
Sbjct: 573 VLVRS-LDLPREIVKYLNQVVEFILDSYAWRTNSSIWSVLKATGRA-PSIEE 622
>gi|256075256|ref|XP_002573936.1| hypothetical protein [Schistosoma mansoni]
Length = 995
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 185/362 (51%), Gaps = 52/362 (14%)
Query: 12 QHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNR 71
+ ++LC L ID + +EAW YK++ +Y+++G Q+ WL CSLY CR+ ++ +
Sbjct: 15 RFEDLCQDLCIDGSVREEAWEKYKDVWANYSIDGDQIQWLVCSLYECCRRCLSDGISGH- 73
Query: 72 TIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTK 131
++ V L+ LL KMS+ QF ++ RKWADM + D R +I +ER F+VS VIF
Sbjct: 74 -VDNAYVSLSRLLSAAKMSMVQFFHRIRKWADMTDMLDDMRDRIELIERQFSVSSVIFRN 132
Query: 132 YLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVN 191
+ F +F D + M T + +F FTW+LF+ ++A + V++DLVN
Sbjct: 133 FGRSFGVLFSDTDYETSQMRP----------TGSDLFRFTWLLFIKSRASFPAVTDDLVN 182
Query: 192 SFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFA------PLDDPPCIISIL 245
S+HLL D V+ S+ RD++N + G+P +FL S P D+P C++ +
Sbjct: 183 SYHLLACCLDWTLGAVMLSRRRDLINMEQNGLPRDFLTSVAQNKTWCPPHDEPTCMLRPI 242
Query: 246 CKHHDGCKL-CVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPG 304
C+ +D + C V+ R + L L E+ ++
Sbjct: 243 CEDNDVNYVECKTVKEH--FFRPFM--LRLIEKDLI------------------------ 274
Query: 305 CEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFLPKFQSFDETAPG 364
KL ++ L ++LE ENF+ + +N YEEYI+ GDFDERI+L S + + G
Sbjct: 275 ---KLHPSV--LGSLLEQENFEITIQNLNNNYEEYIIGTGDFDERIYLSPNASEEIGSIG 329
Query: 365 SS 366
S
Sbjct: 330 ES 331
Score = 41.2 bits (95), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 13/81 (16%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIED 315
V+VR+ L R+IVK+LN E +LDS AW +NS +W ++ +G+ P E+
Sbjct: 573 VLVRS-LDLPREIVKYLNQVVEFILDSYAWRTNSSIWSVLKATGRA-PSIEE-------- 622
Query: 316 LSAILEPENFDYNFKVVNKMY 336
++ PE D K+ + +
Sbjct: 623 ---VIPPEKLDQVRKIFIRYF 640
>gi|195347468|ref|XP_002040274.1| GM19021 [Drosophila sechellia]
gi|194121702|gb|EDW43745.1| GM19021 [Drosophila sechellia]
Length = 799
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 192/384 (50%), Gaps = 56/384 (14%)
Query: 12 QHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNS-N 70
++ LC LN+D T + + Y E+S ++EG+ HW+ ++Y +CR+ + PTV N
Sbjct: 31 EYTNLCRDLNMDRQTELQGYETYLEVSQRCSMEGTASHWMCRAIYTACRRTSTPTVTGQN 90
Query: 71 RTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFT 130
++GN V L +LL+ CKMS+ +F K ++W DM LP F ++I L+R F+++ ++
Sbjct: 91 AVVKGNCVSLNNLLRCCKMSIYEFKTKIKQWCDMANLPQEFVNEIEDLDRKFSITFMLHK 150
Query: 131 KYLPMFKEMFK-PPDLDE----LLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDV 185
++ + +F PP+ + + +H H K C+ K+ + W LF+ K +
Sbjct: 151 RFRIIMDMIFSCPPNEKKHSKYISLHGNHAHGK---CSYIKLDDICWRLFLCAKNQKPSN 207
Query: 186 SNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISIL 245
+ DLV SF+L+I DLIY NV+ K D++NP FEG+PSN+ + F +P CI+S
Sbjct: 208 TVDLVTSFNLMICCIDLIYNNVLAEKRTDLINPKFEGLPSNWTELDFR--HNPHCILSNF 265
Query: 246 CKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGC 305
C + K +A+ R Q++ S S
Sbjct: 266 CDMTEEAKA-----MKATTFR-----------QIMSSFFQAST----------------- 292
Query: 306 EQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFLPKFQSFDETA--- 362
+ GN + + +L ENF+ N K +N YE+Y+LSVG+FDERI L + + + TA
Sbjct: 293 ---IYGNKDTMLGLLANENFERNLKSLNISYEQYVLSVGEFDERI-LSAYDAGEHTALND 348
Query: 363 -----PGSSGPGLDDLSPAPAPGG 381
P + DL PA G
Sbjct: 349 QSLRPPVTPLTRKQDLPAQPAMAG 372
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 13/65 (20%)
Query: 241 IISILCKH--HDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDS 298
II I+ +H H+GC L+R ++KHLN EE L+ LAW NS +W I +
Sbjct: 515 IIEIVVRHGSHEGC-----------LNRSLIKHLNSIEETCLERLAWARNSTVWDMIASA 563
Query: 299 GQEIP 303
+P
Sbjct: 564 QLPLP 568
>gi|194912087|ref|XP_001982431.1| GG12742 [Drosophila erecta]
gi|190648107|gb|EDV45400.1| GG12742 [Drosophila erecta]
Length = 843
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 184/382 (48%), Gaps = 48/382 (12%)
Query: 9 TAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVN 68
T ++ +C LN+D T + Y E+ +LEG + WL C+LY+ CR +++PTV+
Sbjct: 28 TKAMYENMCRQLNMDRQTELLGYQTYLEVRQRCSLEGDVIKWLCCALYMVCRSSSIPTVD 87
Query: 69 S-NRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKV 127
S + + GN V L +LL+ MS+ F+ K ++W DM LP F ++I LER F ++
Sbjct: 88 SKDAVVRGNGVSLNNLLRCGHMSIYDFMTKIKQWCDMANLPQQFVNEIETLERKFGITFT 147
Query: 128 IFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSN 187
++ +Y +F ++F P ++ + RH C+ K+ + W+LF+ K + +
Sbjct: 148 LYKRYRTIFDKIFSCPPNEKKHCNSRHGNHAHGKCSYIKLHDICWLLFLCAKNQKPSHTV 207
Query: 188 DLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCK 247
DLV SF+L+I DLIY NV+ K D++N FEG+PSN+ + F P CI+ C
Sbjct: 208 DLVTSFNLMICCIDLIYNNVLAEKRTDLINSKFEGLPSNWTELDFR--HKPHCILDYFCD 265
Query: 248 HHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
+ K +A+ R Q++ S S
Sbjct: 266 MTEEAKA-----MKATTFR-----------QIMSSFFQAST------------------- 290
Query: 308 KLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFLPKFQSFDETA----- 362
+ G + + +L EN + N K +N YE+Y+LSVG+FDERI L + + + T
Sbjct: 291 -IYGKKDTMLGLLANENLERNLKSLNISYEQYVLSVGEFDERI-LSAYDAGEHTVLNDQS 348
Query: 363 ---PGSSGPGLDDLSPAPAPGG 381
P + DL PA G
Sbjct: 349 LRPPVTPLTRKQDLPAQPAMAG 370
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 13/67 (19%)
Query: 241 IISILCKH--HDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDS 298
II I+ +H H+GC L+R ++KHLN EE L+ +AW NS +W I +
Sbjct: 513 IIEIVVRHGSHEGC-----------LNRSLIKHLNSIEETCLERMAWARNSTVWSMIASA 561
Query: 299 GQEIPGC 305
+P C
Sbjct: 562 QLPLPTC 568
>gi|198437827|ref|XP_002124769.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 1023
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 114/363 (31%), Positives = 188/363 (51%), Gaps = 46/363 (12%)
Query: 7 NETAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRK--ATV 64
+E + ++LC+A+N+D T + AW +Y+ +YTLEG LHWL C+LY +CR ++V
Sbjct: 8 DEDEQRFRDLCLAVNMDKPTMESAWRSYENAKENYTLEGDCLHWLTCTLYSACRTNLSSV 67
Query: 65 PTVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAV 124
T+ + +T N + LT LL+ K+S FL K KW M + D S ++ LER+F V
Sbjct: 68 KTI-AGKTAPSNCISLTKLLREAKLSFISFLKKMDKWLQMNQ-NDPLSSHVSALERSFHV 125
Query: 125 SKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKK-----------KMIHCTSTKVFEFTWI 173
S V+F KY +FK +F PD + VR + K + + C VF F W
Sbjct: 126 STVVFKKYQVVFKYVFLDPDDSKYQRPVRGSAKNPSRPRRNRQYRKLVCNPHDVFNFCWT 185
Query: 174 LFVLTKA-EYLDVSNDLVNSFHLLIATCDLIYANVIQSKL---RDIVNPDFEGMPSNFLD 229
LFV +A E+ +S+++V S+ LL++ +L Y N + + ++NP F G+P+++
Sbjct: 186 LFVHARATEFRSISDEIVLSYQLLLSAINLCYNNALNCSVDHRAQLLNPKFPGLPADW-S 244
Query: 230 SHFAPLDDPPCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNS 289
+ PL II++L + G L L E +V++ W +
Sbjct: 245 TRTEPLTQNQDIIALLVEQQPGT---------GQLDEKF-----LIETRVVNVHNWGKH- 289
Query: 290 PLWKNIEDSGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDER 349
+ +E G + G + +++ P+NF+ N ++K+YEEY+++ GDFDER
Sbjct: 290 -VNSLLESEGLGLSG----------EQNSLFSPQNFETNSSAISKLYEEYVITEGDFDER 338
Query: 350 IFL 352
+FL
Sbjct: 339 VFL 341
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 17/132 (12%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIED 315
+++RAE L +KHLN EEQ+L+SLAW S+S LW+ + + P CE+ +
Sbjct: 561 LVIRAEDGLWGPCIKHLNHIEEQILESLAWKSDSTLWQVLGNGESPAPLCEEV------N 614
Query: 316 LSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFLPKFQSFDETAPGS-----SGPGL 370
S +EP + D + V + +L G P+ ++ E G+ G
Sbjct: 615 HSQHIEPSSADKSTGV-----NKGLLGPGTPKSPPTHPRVKAVSEGEIGNLRKFEPGTAR 669
Query: 371 DDLSPAPAPGGA 382
D S +P+PG A
Sbjct: 670 DRFS-SPSPGSA 680
>gi|195040219|ref|XP_001991027.1| GH12452 [Drosophila grimshawi]
gi|193900785|gb|EDV99651.1| GH12452 [Drosophila grimshawi]
Length = 818
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 171/341 (50%), Gaps = 46/341 (13%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
+ LC LN+D T +A+ E+ HY+LEG HW C+L+ +CR++T PTV+ T+
Sbjct: 34 ENLCRDLNMDRQTEVDAFRMLNEVLQHYSLEGEIGHWFCCALFAACRQSTTPTVDGQDTV 93
Query: 74 -EGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKY 132
GN V L +LL+ C+MS+ +F + + W DM LP F ++ LER F ++ ++ KY
Sbjct: 94 VMGNCVPLNNLLRSCQMSIYEFTPRIKLWCDMANLPQEFIQQMEELERKFFITFTLYKKY 153
Query: 133 LPMFKEMFK-PPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVN 191
+F+++F PP+ + K C+ K+ + W LF+ K + + DLV
Sbjct: 154 RKIFEQVFFCPPN-------EKKYSKYSTKCSYIKLDDICWRLFLCCKNQKPTTTLDLVT 206
Query: 192 SFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPP-CIISILCKHHD 250
S++L++ DLIYANV+ K D++NP+FEG+P N+ HF CI+ C+ D
Sbjct: 207 SYNLMMCCIDLIYANVLAEKRTDLINPNFEGLPPNWNSPHFDETQARNHCILKYFCEMTD 266
Query: 251 GCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLR 310
K + ++ NI S + +
Sbjct: 267 EAK--------------------------------TMKATVFSNIMHSFFQ----ANTIF 290
Query: 311 GNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIF 351
G E L ++ +NF+ N + +N YE+Y+LSVG+FDERI
Sbjct: 291 GKEETLLGLVANKNFERNLRSLNVSYEQYVLSVGEFDERIL 331
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPG----CEQKLRG 311
V+ + L+R +VKHLN EE L+ L W SP W I + +P CE + G
Sbjct: 513 VVRNGKDCLTRSLVKHLNSIEETCLERLVWQRISPAWDIIGSAANPLPPYMEVCEGRTAG 572
Query: 312 NIE 314
++
Sbjct: 573 PLQ 575
>gi|195394071|ref|XP_002055669.1| GJ19490 [Drosophila virilis]
gi|194150179|gb|EDW65870.1| GJ19490 [Drosophila virilis]
Length = 815
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 174/341 (51%), Gaps = 46/341 (13%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNS-NRT 72
+ LC LN+D T EA+ E+ H +LEG +HW C+L+ +CR++T PTV +
Sbjct: 34 ENLCRDLNMDRQTEVEAFRMLNEVQEHCSLEGDNMHWFCCALFAACRQSTTPTVGGQDAV 93
Query: 73 IEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKY 132
+ GN V L +LL+ C MS+ +F K + W DM LP F ++ LER F+++ I+ +Y
Sbjct: 94 VMGNCVPLNNLLRSCHMSIYEFKQKIKLWCDMANLPQVFVQQMEELERKFSITFTIYKRY 153
Query: 133 LPMFKEMFK-PPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVN 191
+F+++F PP+ + H R++ K CT +K+ +W LF+ K + + DLV
Sbjct: 154 RNIFEQLFICPPNEKK---HSRNSPK----CTYSKLDNISWRLFLCAKNQKPTRTLDLVT 206
Query: 192 SFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPP-CIISILCKHHD 250
+F+L+I DLIYANV+ K D++NP+F+G+P N+ F CI+ C
Sbjct: 207 TFNLMICCLDLIYANVLAEKRTDLINPNFKGLPPNWNTPDFDETQARKHCILDFFCDMKA 266
Query: 251 GCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLR 310
K ++A+ + +I+ T V
Sbjct: 267 DAKE---IKAKGFI--EIIHSFFQTNTIV------------------------------- 290
Query: 311 GNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIF 351
GN + L ++ NF+ N K +N YE+Y+LSVG+FDER+
Sbjct: 291 GNEDTLLGLVANNNFERNLKSLNLSYEQYVLSVGEFDERVL 331
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 13/69 (18%)
Query: 241 IISILCKH--HDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDS 298
II I+ +H +GC L+R +VKHLN EE L+ LAW SP+W+ I ++
Sbjct: 505 IIEIVVRHGSREGC-----------LTRSLVKHLNSIEETCLERLAWQLISPVWEMIGNT 553
Query: 299 GQEIPGCEQ 307
G+ +P C +
Sbjct: 554 GKPLPTCTE 562
>gi|326931679|ref|XP_003211954.1| PREDICTED: retinoblastoma-like protein 1-like [Meleagris gallopavo]
Length = 982
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/271 (38%), Positives = 151/271 (55%), Gaps = 39/271 (14%)
Query: 83 LLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLPMFKEMFKP 142
+L + K+SL QF +K +KW DM +P FR ++ RLERNF VS VIF K+ P+F ++F+
Sbjct: 2 ILINAKLSLIQFFSKMKKWMDMSNVPQEFRERVERLERNFEVSTVIFRKFEPIFLDIFQN 61
Query: 143 PDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCDL 202
P+ +E R K++ + C +F F W LFV TK + + +DLVNS+HLL+ DL
Sbjct: 62 PN-EETSKPQRSRKQRRVLCGVKDLFNFCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDL 120
Query: 203 IYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGCKLCVIVRAE 261
++AN I RD++NP F+G+P++F +DPPCII+ LC+ HDG ++V A+
Sbjct: 121 VFANAILCPNRRDLLNPSFKGLPADFHAPEMKASEDPPCIIATLCELHDG----LLVEAK 176
Query: 262 ASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIEDLSAILE 321
I +H P + D + L+G +L+
Sbjct: 177 G-----IKEHY---------------FKPYISKLFD--------RKILKG-----ECLLD 203
Query: 322 PENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
NF N K +NK YEEY+L+VGDFDER+FL
Sbjct: 204 LCNFTENNKALNKEYEEYVLTVGDFDERVFL 234
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 12/73 (16%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIED 315
V++R+E LSRD+VKHLN EEQ+L+SLAW +S LW ++ SG CE+
Sbjct: 451 VLIRSEEGLSRDMVKHLNSIEEQILESLAWTRDSALWTALQASGNRX-TCEE-------- 501
Query: 316 LSAILEPENFDYN 328
++ P NF+ N
Sbjct: 502 ---VIFPNNFEAN 511
>gi|358339643|dbj|GAA47664.1| retinoblastoma-like, partial [Clonorchis sinensis]
Length = 1048
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/335 (30%), Positives = 166/335 (49%), Gaps = 51/335 (15%)
Query: 40 HYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCR 99
+Y+++G Q+ WL CSLY CR++ ++ S +E V L LL KMS+ QF ++ +
Sbjct: 4 NYSIDGDQIQWLVCSLYECCRRSVADSI-SGHVVENAYVSLARLLSAAKMSMVQFFHRIK 62
Query: 100 KWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKM 159
KWADM + D R ++ LER FAVS VIF + F +F+ + + +M
Sbjct: 63 KWADMTDMVDDMRDRVELLERQFAVSSVIFRNFGRSFGVLFR---------ETSYIQSQM 113
Query: 160 IHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPD 219
H T T +F TW+LF+ ++ + V++DLVNS+HLL+ D + V+ S D++N +
Sbjct: 114 -HPTGTDLFRLTWLLFIKSRTSFPAVTDDLVNSYHLLVCCLDWVLGAVMVSGRHDLINVE 172
Query: 220 FEGMPSNFLDSHFA------PLDDPPCIISILCKHHDGCKL-CVIVRAEASLSRDIVKHL 272
G+P +FL++ P D+PPC++ +C+ ++ + C V+ R + L
Sbjct: 173 MNGLPKDFLNAIGQNKPWCPPGDEPPCMLRPICEDNEVNYVECKTVKEH--FFRSFIMRL 230
Query: 273 NLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVV 332
E L+ + + S +LE NFD + +
Sbjct: 231 IEKETIKLEPMVYGS-------------------------------LLESGNFDITLQNL 259
Query: 333 NKMYEEYILSVGDFDERIFLPKFQSFDETAPGSSG 367
N YEEYI+ GDFDERI+L + + + G SG
Sbjct: 260 NNSYEEYIIGTGDFDERIYLSPSAAEEIGSAGDSG 294
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V+VR+ RD+VK++N E +LDS AW ++SPLW ++ SG+ P E+
Sbjct: 533 VVVRS-IDFPRDMVKYMNQVAELILDSYAWRASSPLWSMLKASGRA-PSIEE 582
>gi|47193546|emb|CAF87007.1| unnamed protein product [Tetraodon nigroviridis]
Length = 178
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 86/180 (47%), Positives = 121/180 (67%), Gaps = 4/180 (2%)
Query: 44 EGSQLHWLGCSLYVSCRKATVPTVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWAD 103
+GS+LHWL C+LYV+CR ++VPTV T EGN V LT +L+ +MSL +F NK +KW D
Sbjct: 1 QGSELHWLACALYVACR-SSVPTVGKG-TSEGNYVSLTRILRCSEMSLIEFFNKMKKWQD 58
Query: 104 MRKLPDSFRSKIARLERNFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCT 163
M LP FR +LERNF VS VIF KY+P+FK +FK P + +H R K++ CT
Sbjct: 59 MASLPQDFRESTNKLERNFTVSAVIFKKYVPIFKTIFKAPSEEPPRVH-RSRKQRRHPCT 117
Query: 164 STKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCDLIYANVIQSKLR-DIVNPDFEG 222
++VF F W+LFV K + +S+DLVNS+HLL+ DL++ N + R +++NP+F+G
Sbjct: 118 ISEVFNFCWVLFVHAKGNFPMISDDLVNSYHLLLCALDLVFTNALLCNARKELLNPNFKG 177
>gi|195432212|ref|XP_002064120.1| GK19998 [Drosophila willistoni]
gi|194160205|gb|EDW75106.1| GK19998 [Drosophila willistoni]
Length = 833
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 179/356 (50%), Gaps = 52/356 (14%)
Query: 5 ADNETAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATV 64
A T ++ LC LN+D T ++ + ++E+ +LEG HWL C LY++CRK ++
Sbjct: 47 AQENTRAIYENLCRELNMDRQTEEDGYKTFQEVCQRCSLEGDVRHWLCCCLYMACRKFSM 106
Query: 65 PTVNS-NRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFA 123
PTVN + + GN V L +LL+ C++S+ F K ++W DM L ++ I ++R F+
Sbjct: 107 PTVNGEDAVVRGNGVSLNNLLRCCQISIYDFKTKIKQWCDMANLSPDCKNLIEIVDRKFS 166
Query: 124 VSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIH--------CTSTKVFEFTWILF 175
++ ++ Y +F+ +F P ++ +H+K +H C+ K+ + W LF
Sbjct: 167 ITFTLYKNYRVIFETIFLCPPNEK-----KHSKYSSLHANHTSHGRCSYIKLDDICWRLF 221
Query: 176 VLTKAEYLDVSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPL 235
+ K + + DLV S++L+I DLIYANV+ K D++NPDFEG+PSN+ F
Sbjct: 222 LCAKNQKPATTVDLVTSYNLMICCIDLIYANVLAEKRSDLINPDFEGLPSNWNSPDFRAR 281
Query: 236 DDPPCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNI 295
D+ CI+ C E S+ +K L+ I
Sbjct: 282 DN--CILVYFC--------------EMSVEAKAMKE------------------TLFPKI 307
Query: 296 EDSGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIF 351
S + + + GN + + +L EN + N + +N YE+Y+LSVG+ DERI
Sbjct: 308 IASFFQ----AKTIYGNKDTMLGLLARENCERNLRSLNISYEQYVLSVGELDERIL 359
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 264 LSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIP 303
L+R +KHLN EE L+ LAW SP+W+ I + + +P
Sbjct: 554 LNRSQIKHLNSIEETCLERLAWSRTSPVWEMIASAVKPLP 593
>gi|147905768|ref|NP_001084880.1| retinoblastoma-like 1 (p107) [Xenopus laevis]
gi|47123211|gb|AAH70856.1| MGC84607 protein [Xenopus laevis]
Length = 998
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/288 (37%), Positives = 154/288 (53%), Gaps = 49/288 (17%)
Query: 71 RTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFT 130
R GN V LT +L+ K+SL QF NK +KW DM LP FR ++ RLERNF V+ VIF
Sbjct: 33 RNHGGNGVSLTRILRSAKLSLIQFFNKMKKWIDMSNLPQEFRERVERLERNFEVATVIFK 92
Query: 131 KYLPMFKEMFKPPDLDELLMHVRHNKK-----KMIHCTSTKVFEFTWILFVLTKAEYLDV 185
K+ P+F+E+F+ P DE R K+ + + C+ +F F W LFV +K + +
Sbjct: 93 KFEPIFREIFQNPH-DEQPRLPRSRKQSILFCRRLQCSVKDLFSFCWTLFVYSKGNFCLI 151
Query: 186 SNDLVNSFHLLIATCDLIYANVIQSKLR-DIVNPDFEGMPSNFLDSHFAPLDDPPCIISI 244
+DLVNS+HLL+ DLIYA+V+Q + D++NP F + LDS +D PCII
Sbjct: 152 GDDLVNSYHLLLCCLDLIYAHVLQCPNKEDLLNPSFTAKLA--LDSSS---EDTPCIIGA 206
Query: 245 LCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPG 304
LC+ +DG + EA + I +H P + D
Sbjct: 207 LCELYDG------ISVEA---KGIKEHY---------------FKPYIAKLHD------- 235
Query: 305 CEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
++ L+G + +L+ F N K +NK YEEY+L+ GDFDER+FL
Sbjct: 236 -KKILKG-----ACLLDVSCFTDNNKSLNKEYEEYVLTKGDFDERVFL 277
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 12/71 (16%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIED 315
V +R+E LSRD+VKHLN EEQ+L+S AW S+S LW ++ D+ ++P CE+
Sbjct: 493 VFIRSEDGLSRDMVKHLNTIEEQILESRAWTSDSVLWVHL-DAVDDVPTCEE-------- 543
Query: 316 LSAILEPENFD 326
++ P NF+
Sbjct: 544 ---VIIPSNFE 551
>gi|443718002|gb|ELU08799.1| hypothetical protein CAPTEDRAFT_192080 [Capitella teleta]
Length = 1021
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 94/259 (36%), Positives = 134/259 (51%), Gaps = 50/259 (19%)
Query: 1 MGQLADNE--TAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQ---LHWLGCSL 55
MGQ D + T ++++LC+ LN+D +AW +++ ++H YTLE S+ +HWL C+L
Sbjct: 1 MGQSDDGDSITEKRYEDLCLDLNMDKNAKDDAWISFERITHSYTLEASRGDAIHWLTCAL 60
Query: 56 YVSCRKATVPTVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKI 115
YVSCRK+ VPTV +EGN V LT LL+ K+SL +F K +KW DM LP+ FRSK+
Sbjct: 61 YVSCRKSLVPTVGRG-IMEGNGVSLTRLLRSSKLSLIEFFKKMKKWLDMANLPEEFRSKV 119
Query: 116 ARLERNFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILF 175
RLERNF+VS VIF KY P+F ++F P E R K+K +
Sbjct: 120 DRLERNFSVSTVIFKKYKPIFLDLFNDP-AKEAPRPPRSRKQKYV--------------- 163
Query: 176 VLTKAEYLDVSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPL 235
+LI C D++N F G+P F + P
Sbjct: 164 -------------------ILITKC---------PNRGDLLNRKFPGLPEKFDSKDYRPP 195
Query: 236 DDPPCIISILCKHHDGCKL 254
+ PCI+ +L + H+G L
Sbjct: 196 TETPCIVQLLSERHEGLLL 214
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 34/52 (65%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V+VRAE LSRD+VKH+N EE +LDSLAW S LW I+ +P E+
Sbjct: 479 VLVRAEEGLSRDVVKHMNHIEELILDSLAWKDGSMLWDAIKQFPNGVPSVEE 530
>gi|313225294|emb|CBY06768.1| unnamed protein product [Oikopleura dioica]
Length = 888
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 185/357 (51%), Gaps = 47/357 (13%)
Query: 5 ADNETAHQHQ------ELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVS 58
+DNE ++ E+ L +D +T + AW Y +S +TLEGS W GC+++ +
Sbjct: 4 SDNEMENEQSATVKMTEIAQLLALDQSTLERAWKVYSHVSETFTLEGSSDVWAGCAIFAA 63
Query: 59 CRKATVPTVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARL 118
C TV + + + I GN + L SLL +SL F+ K ++W++M +L ++F +KI +L
Sbjct: 64 C-SMTVNSSMNGKEINGNCISLMSLLDEIGISLIDFMTKIKRWSEMAQLGETFDAKILQL 122
Query: 119 ERNFAVSKVIFTKYLPMFK--EMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFV 176
E+NF+V VIF K+ P+F+ ++F+ ++ + R K+ I K EFTW+LF+
Sbjct: 123 EKNFSVVTVIFKKFAPIFRKGDVFR---INCIATPGRRKGKRPISHEQLK--EFTWLLFI 177
Query: 177 LTKAEYLDVSNDLVNSFHLLIATCDLIYANV-IQSKLRDIVNPDFEGMPSNFLDSHFAPL 235
TK+ + V+ DLVN++HLL++ + ++ NV +Q L+ V + +P + + F
Sbjct: 178 HTKSHFPKVAGDLVNAYHLLLSCINFVFRNVYLQVNLKGYVKEAY--VPEDENNMSF--- 232
Query: 236 DDPPCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNI 295
I+ LC+ H G ++ A+ + H+ Q D A+ ++
Sbjct: 233 --DVSILEKLCERHQG----LVTDAQCINAHWFEPHIIQLFNQ--DKFAFHNSD------ 278
Query: 296 EDSGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+ G+EI + G + +S ++ N + + MY E++L GDFDE +FL
Sbjct: 279 QQRGEEI------MNGAFDGMS-------YETNVRELKNMYSEFVLLRGDFDETVFL 322
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 8/54 (14%)
Query: 256 VIVRAEAS----LSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGC 305
+I+RA+ L RD+VKHL EE++L+ L+W + SPLWKN ED +P C
Sbjct: 523 LILRADLGSGLRLPRDVVKHLAFIEERILEELSWDNKSPLWKN-EDP---VPTC 572
>gi|74209132|dbj|BAE24958.1| unnamed protein product [Mus musculus]
Length = 174
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/138 (52%), Positives = 94/138 (68%), Gaps = 2/138 (1%)
Query: 6 DNETAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVP 65
++ + +ELC LN+D EAW++Y+ MS YTLEG+ LHWL C+LYV+CRK +VP
Sbjct: 39 SHQIQQRFEELCSRLNMDEAARAEAWSSYRSMSESYTLEGNDLHWLACALYVACRK-SVP 97
Query: 66 TVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVS 125
TV S T EGN V LT +L+ + SL +F NK +KW DM LP FR + RLERNF VS
Sbjct: 98 TV-SKGTAEGNYVSLTRILRCSEQSLIEFFNKMKKWEDMANLPPHFRERTERLERNFTVS 156
Query: 126 KVIFTKYLPMFKEMFKPP 143
VIF KY P+F+++FK P
Sbjct: 157 AVIFKKYEPIFQDIFKYP 174
>gi|391340370|ref|XP_003744515.1| PREDICTED: retinoblastoma-like protein 1-like [Metaseiulus
occidentalis]
Length = 885
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 171/348 (49%), Gaps = 37/348 (10%)
Query: 6 DNETAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVP 65
D + + +C +LN+D ++ +A A+ ++ +YTLEG HWL CSLYV+CR+ T+P
Sbjct: 8 DQAVQERLKAVCASLNMDKQSSHDALEAFNAIAANYTLEGDCRHWLACSLYVACREGTMP 67
Query: 66 TVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVS 125
TV S ++GN V L LL C++ L +F K KWA M KL ++ L+ +F V+
Sbjct: 68 TVASTSNLQGNCVSLRGLLSACELDLLEFFRKMEKWAAMTKL--DMGRRLTDLKDSFYVT 125
Query: 126 KVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKA-EYLD 184
++F+K+ +F E+F + D+ M+ R + + + + ++ W+L++ K+ E +
Sbjct: 126 TIMFSKFHQVFVELFTGFEQDQSNMN-RARRYRRGPTSVSDIYRLCWLLYISLKSNEKIR 184
Query: 185 VSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISI 244
++ V FHLL+ D +Y + + + D+ N DF ++ L D I+
Sbjct: 185 INTGTVPCFHLLLCCLDFVYVSCVVAGRTDLFNQDFYQEQLGKCEAAGVELKD-IGILRS 243
Query: 245 LCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPG 304
LC+ H G LS V ++ + V + +A +
Sbjct: 244 LCEKHKG-----------ELSEANVFRVHYLQRPVKELIAMGT----------------- 275
Query: 305 CEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
L+G+ + LS +E ++ + K + + +E +L G+ DE+IFL
Sbjct: 276 ----LKGSTDPLSLAIEFKDVEVTIKSLKQSHEMTVLRGGELDEQIFL 319
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
Query: 257 IVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKL 309
++RAE LSR++VKH N EEQ+ +S+AW S+SP+W+ + + +P +Q L
Sbjct: 538 MIRAEVRLSREVVKHFNKIEEQIFESIAWRSDSPVWEQV--GVKTVPQAQQAL 588
>gi|158295912|ref|XP_316517.4| AGAP006477-PA [Anopheles gambiae str. PEST]
gi|157016260|gb|EAA11652.4| AGAP006477-PA [Anopheles gambiae str. PEST]
Length = 918
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 166/357 (46%), Gaps = 60/357 (16%)
Query: 13 HQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRT 72
H+++C ALNID+ T +W++++ + L G HW+ C+LYV+C + + +
Sbjct: 13 HRKICRALNIDADTENRSWSSFERTRDQFDLTGEPTHWMCCALYVACLQELPAVGDPDHY 72
Query: 73 IEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKY 132
I+GN V +T+LL C + + +F +K ++W+++R LP R+ + L F+VS +T +
Sbjct: 73 IQGNGVNITNLLTQCDIKIQEFFSKMKQWSEIRSLPGRLRTAVDNLHHEFSVSITTYTVF 132
Query: 133 LPMFKEMFKPPDL--DELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLV 190
F +F ++ DE R+ K K C+ ++ EF+W+LF+ K ++ + DL
Sbjct: 133 GEDFPRIFNEANIVPDE---PKRNKKSKPNPCSYNRLREFSWLLFLTVKEQHREQRRDLA 189
Query: 191 NSFHLLIATCDLIYANVIQSKLRDIVNPDF--EGMPSNFLDSHFAPLDDPPCIISILCKH 248
+ L + DLIY NV+ D+VNP EG S+
Sbjct: 190 TAMDLCVCVMDLIYRNVVADGRMDLVNPKVLQEGGSSSV--------------------- 228
Query: 249 HDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEI--PGCE 306
DG AEA+L ++ EQ+ + S S ++++ + + P
Sbjct: 229 -DG----TTAAAEAALKINV-------REQLCNEYPTTSES-----VDETNRSVFLPALS 271
Query: 307 QKLRGNIEDLSAILEPE-----------NFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+ N DL P+ NF+ N K++N+ YE IL G DERI L
Sbjct: 272 SMVEAN--DLRGTRAPDGQSFLGLVSVANFEDNLKLLNRRYERCILRCGMLDERIAL 326
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%)
Query: 264 LSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPG 304
L+ DIV HL EEQ++DS++W S+S LW+ +E +IP
Sbjct: 548 LTSDIVNHLRRIEEQLVDSISWKSSSVLWECMEKENYQIPA 588
>gi|444725591|gb|ELW66152.1| Retinoblastoma-like protein 2 [Tupaia chinensis]
Length = 1056
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 112/202 (55%), Gaps = 33/202 (16%)
Query: 152 VRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCDLIYANVIQ-S 210
+R ++++ CT +++F F W+LF+ K + +S+DLVNS+HLL+ DL+Y N +Q S
Sbjct: 166 LRCSEQRRQPCTVSEIFHFCWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCS 225
Query: 211 KLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGCKLCVIVRAEASLSRDIVK 270
+++VNP+F G+ +F P DPPC+I LC HDG L ++ I +
Sbjct: 226 NRKELVNPNFRGLSEDFHAKDSKPASDPPCVIEKLCSLHDGLVL---------EAKGIKE 276
Query: 271 HLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIEDLSAILEPENFDYNFK 330
H W P + + + ++ L+G E+L+ LEP NF +FK
Sbjct: 277 HF------------W---KPYIRKLYE--------KKLLKGKEENLTGFLEPGNFGESFK 313
Query: 331 VVNKMYEEYILSVGDFDERIFL 352
+NK YEEY+LSVG+ DERIFL
Sbjct: 314 AINKAYEEYVLSVGNLDERIFL 335
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 52/71 (73%), Gaps = 2/71 (2%)
Query: 15 ELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTIE 74
ELC LN+D EAW++Y+ M+ YTLEG+ LHWL C+LYV+CRK +VPTV S T+E
Sbjct: 99 ELCSRLNMDEAARAEAWDSYRSMNESYTLEGNDLHWLACALYVACRK-SVPTV-SKGTVE 156
Query: 75 GNLVCLTSLLK 85
GN V LT +L+
Sbjct: 157 GNYVSLTRILR 167
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 35/52 (67%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW SPLW I D+ IP CE+
Sbjct: 505 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWDRIRDNENRIPTCEE 556
>gi|347378|gb|AAA36397.1| p107, partial [Homo sapiens]
Length = 935
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 124/227 (54%), Gaps = 39/227 (17%)
Query: 127 VIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVS 186
VIF KY P+F ++F+ P +E R K++ I C+ +F F W LFV TK + +
Sbjct: 1 VIFKKYEPIFLDIFQNP-YEEPPKLPRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIG 59
Query: 187 NDLVNSFHLLIATCDLIYANVIQSKLR-DIVNPDFEGMPSNFLDSHFAPLDDPPCIISIL 245
+DLVNS+HLL+ DLI+AN I R D++NP F+G+PS+F + F ++PPCII++L
Sbjct: 60 DDLVNSYHLLLCCLDLIFANAIMCPNRQDLLNPSFKGLPSDFHTADFTASEEPPCIIAVL 119
Query: 246 CKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGC 305
C+ HDG ++V A+ I +H P + D
Sbjct: 120 CELHDG----LLVEAKG-----IKEHY---------------FKPYISKLFD-------- 147
Query: 306 EQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+ L+G +L+ +F N K VNK YEEY+L+VGDFDERIFL
Sbjct: 148 RKILKGE-----CLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFL 189
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 40/52 (76%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++R+E LSRD+VKHLN EEQ+L+SLAW +S LW+ ++ S ++P CE+
Sbjct: 406 VVIRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQVSANKVPTCEE 457
>gi|312371805|gb|EFR19899.1| hypothetical protein AND_21621 [Anopheles darlingi]
Length = 1037
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 167/382 (43%), Gaps = 64/382 (16%)
Query: 13 HQELCMALNIDSTTAKEAWNAYKEMSHHY------------------------------T 42
H+++C ALNID+ T +W ++++ Y T
Sbjct: 19 HRKICRALNIDANTEDRSWESFEQTRAQYDLTAECHSELVPFLVFFNATCPWEIGSQCKT 78
Query: 43 LEGSQLHWLGCSLYVSCRKATVPTV-NSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKW 101
G LHW+ CSLYV+ + PTV N +R +GN V +T+LLK C +++ +F K W
Sbjct: 79 YPGDPLHWMCCSLYVAGLQEIRPTVGNPDRYFQGNGVHITNLLKQCGINIQEFFIKINDW 138
Query: 102 ADMRKLPDSFRSKIARLERNFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIH 161
+ + LP +S+I L+ F V+ +T + F +F L R+ K K
Sbjct: 139 SSITSLPARLKSQIDNLQHEFTVAIGAYTAFNEDFPRIFNDTALTPEEPK-RNKKAKPNP 197
Query: 162 CTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDF- 220
C+ ++ EF+W+LF+ K ++ + D +L + DLIY NV+ + +++NP+
Sbjct: 198 CSYNRLREFSWVLFLCVKEQHQEQRRDRTTVMNLAVCVMDLIYRNVVAEERLELLNPNML 257
Query: 221 ------EGMP-SNFLDSHFAPLDDPP---CIISILCKHHDGCKLCVIVRAEASLSRDIVK 270
+G+ + D A L + II++LC + C V A +R I
Sbjct: 258 IPVSGADGVAGGSTADGGTAALLEASRQNNIIAMLCSEYPTCSDSV-----AETNRTI-- 310
Query: 271 HLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIEDLSAILEPENFDYNFK 330
L +L + + + S G E+ E +L NFD N K
Sbjct: 311 --------FLPTLGSMFGTKDLRGTRKSSATGDGDEE------EQFLNLLTVGNFDENLK 356
Query: 331 VVNKMYEEYILSVGDFDERIFL 352
+N+ YE YIL G DERI L
Sbjct: 357 SLNRRYERYILQRGMLDERIAL 378
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 253 KLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIP 303
++ V+ +E L+ DIV HL EEQV+DSL W +S LW+ +E +IP
Sbjct: 578 EVTVVANSEI-LTTDIVNHLRRVEEQVIDSLCWTRSSVLWEKMEKENYQIP 627
>gi|297283996|ref|XP_002802522.1| PREDICTED: retinoblastoma-like protein 2-like [Macaca mulatta]
Length = 1072
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 106/192 (55%), Gaps = 33/192 (17%)
Query: 162 CTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCDLIYANVIQ-SKLRDIVNPDF 220
CT +++F F W+LF+ K + +S+DLVNS+HLL+ DL+Y N +Q S +++VN +F
Sbjct: 128 CTVSEIFHFCWVLFIYAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNCNF 187
Query: 221 EGMPSNFLDSHFAPLDDPPCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVL 280
+G+ +F P DPPCII LC HDG L ++ I +H
Sbjct: 188 KGLSEDFHAKDSKPSSDPPCIIEKLCSLHDGLVL---------EAKGIKEHF-------- 230
Query: 281 DSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYI 340
W P + + + ++ L+G E+L+ LEP NF +FK +NK YEEY+
Sbjct: 231 ----W---KPYIRKLYE--------KKLLKGKEENLTGFLEPGNFGESFKAINKAYEEYV 275
Query: 341 LSVGDFDERIFL 352
LSVG+ DERIFL
Sbjct: 276 LSVGNLDERIFL 287
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 52/71 (73%), Gaps = 2/71 (2%)
Query: 15 ELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTIE 74
ELC LN+D EAW++Y+ MS YTLEG+ LHWL C+LYV+CRK +VPTV S T+E
Sbjct: 51 ELCSRLNMDEAARAEAWDSYRSMSESYTLEGNDLHWLACALYVACRK-SVPTV-SKGTVE 108
Query: 75 GNLVCLTSLLK 85
GN V LT +LK
Sbjct: 109 GNYVSLTRILK 119
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW SPLW+ I D+ +P CE+
Sbjct: 503 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWEKIRDNENRVPTCEE 554
>gi|47200371|emb|CAF88228.1| unnamed protein product [Tetraodon nigroviridis]
Length = 175
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 108/178 (60%), Gaps = 4/178 (2%)
Query: 46 SQLHWLGCSLYVSCRKATVPTVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMR 105
S+LHWL C+LYV+CR ++VPTV T EGN V L + ++ L + + A
Sbjct: 1 SELHWLACALYVACR-SSVPTVGKG-TSEGNNVSLNQNPALLRDEPDRVLQQDEEVAGHG 58
Query: 106 KLPDSFRSKIARLERNFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTST 165
+ FR +LERNF VS VIF KY+P+FK +FK P + +H R K++ CT +
Sbjct: 59 QPAADFRESTNKLERNFTVSAVIFKKYVPIFKTIFKAPSEEPPRVH-RSRKQRRHPCTIS 117
Query: 166 KVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCDLIYANVIQSKLR-DIVNPDFEG 222
+VF F W+LFV K + +S+DLVNS+HLL+ DL++ N + R +++NP+F+G
Sbjct: 118 EVFNFCWVLFVHAKGNFPMISDDLVNSYHLLLCALDLVFTNALLCNARKELLNPNFKG 175
>gi|170571751|ref|XP_001891849.1| Retinoblastoma-associated protein A domain containing protein
[Brugia malayi]
gi|158603413|gb|EDP39348.1| Retinoblastoma-associated protein A domain containing protein
[Brugia malayi]
Length = 924
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 171/355 (48%), Gaps = 71/355 (20%)
Query: 16 LCMALN--IDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKAT-----VPTVN 68
+C L+ ID ++AW Y + Y LEG QL W C++Y+S + + VP
Sbjct: 37 ICKQLDPKIDEDFIEKAWKQYDTVGKQYVLEGKQLTWYACAVYLSMWQGSLLENAVPKKY 96
Query: 69 SNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVI 128
S L LLK CK+S+ +F +K KW +M P + I+R++ + AVS V+
Sbjct: 97 S----------LAKLLKICKLSVLEFFDKXTKWVEMINGPRRLKDHISRVQSSLAVSAVV 146
Query: 129 FTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSND 188
F K LP+F+++F PP ++ + K ++C K+F W LF++ + ++ S+D
Sbjct: 147 FKKLLPIFRKIFAPPYSND-----DEDDVKGLNC--KKLFSLLWTLFIVMRKQF--NSDD 197
Query: 189 LVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKH 248
L+NSFHLL+ T D I+ ++ +S++ +++ DF N +D + I+ LC+
Sbjct: 198 LMNSFHLLLCTVDFIFQDLRRSEMTCLLDGDF----INAVDIQH----EEDSILETLCQI 249
Query: 249 HDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQK 308
+G V++ A KH + W+ P + + E+K
Sbjct: 250 FEG----VVLDA---------KHFR--------THCWL---PKMRRM---------SEEK 276
Query: 309 LRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFLPKFQS--FDET 361
EDL+ E N K ++ +YEE I+ G+ DER+FLP S FDE
Sbjct: 277 TIETGEDLTNFAANEFI--NKKKLDSIYEELIVKRGEMDERMFLPADISIVFDEA 329
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCE 306
+I+RA++SLSR++VKHLN EE+VL+ AW +SPLW ++ +P +
Sbjct: 552 LIIRADSSLSREMVKHLNKVEERVLEEFAWSLDSPLWPSLHRRTDGVPSSQ 602
>gi|380807333|gb|AFE75542.1| retinoblastoma-like protein 1 isoform a, partial [Macaca mulatta]
Length = 123
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 77/116 (66%), Gaps = 1/116 (0%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
Q LC LN+D +A EA + + + +Y+LEG HWL CSLYV+CRK+ +PTV +
Sbjct: 8 QALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVTHWLACSLYVACRKSIIPTVGKG-IM 66
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIF 129
EGN V LT +L+ K+SL QF +K +KW DM LP FR +I RLERNF VS VIF
Sbjct: 67 EGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRERIERLERNFEVSTVIF 122
>gi|444729193|gb|ELW69620.1| Retinoblastoma-like protein 1 [Tupaia chinensis]
Length = 697
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 109/202 (53%), Gaps = 38/202 (18%)
Query: 152 VRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCDLIYANVIQ-S 210
+R K + I C+ +F F W LFV TK + + +DLVNS+HLL+ DLI+AN I
Sbjct: 12 LRSAKLRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIMCP 71
Query: 211 KLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGCKLCVIVRAEASLSRDIVK 270
RD++NP F+G+PS+F + F ++PPCII++LC+ HDG ++V A+ I +
Sbjct: 72 NRRDLLNPSFKGLPSDFHTADFRASEEPPCIIAVLCELHDG----LLVEAKG-----IKE 122
Query: 271 HLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIEDLSAILEPENFDYNFK 330
H P + D + L+G +L+ +F N K
Sbjct: 123 HY---------------FKPYISKLFD--------RKILKGE-----CLLDLSSFTDNSK 154
Query: 331 VVNKMYEEYILSVGDFDERIFL 352
VNK YEEY+L+VGDFDERIFL
Sbjct: 155 AVNKEYEEYVLTVGDFDERIFL 176
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 40/52 (76%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++R+E LSRD+VKHLN EEQ+L+SLAW +S LW+ ++ S ++P CE+
Sbjct: 251 VVIRSEEGLSRDMVKHLNSIEEQILESLAWSHSSVLWETLQASANKVPTCEE 302
>gi|195469583|ref|XP_002099716.1| GE16566 [Drosophila yakuba]
gi|194187240|gb|EDX00824.1| GE16566 [Drosophila yakuba]
Length = 216
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 106/191 (55%), Gaps = 9/191 (4%)
Query: 9 TAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTV- 67
T ++ LC LN+D T ++ + A+ E+S +LEG LHWL C+LY +CR+ + PTV
Sbjct: 28 TKAKYTNLCRDLNMDRRTEEQGYQAFHEVSQRCSLEGESLHWLCCALYAACRRCSTPTVI 87
Query: 68 NSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKV 127
+ + GN V L +LL+ C+MS+ F K ++W DM LP F +I L+R F+++
Sbjct: 88 GQDAVVRGNCVSLNNLLRCCQMSIYDFKTKIKQWCDMANLPQEFVKEIEVLDRKFSITFT 147
Query: 128 IFTKYLPMFKEMFK-PPDLDE----LLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEY 182
++ ++ +F +F PP+ + + +H H K C+ K+ + W LF+ K +
Sbjct: 148 LYKRFCTIFDMIFSCPPNEKKHSKYISLHGNHGHGK---CSYIKLEDICWRLFLCAKNQK 204
Query: 183 LDVSNDLVNSF 193
+ DLV SF
Sbjct: 205 PSNTVDLVTSF 215
>gi|221044944|dbj|BAH14149.1| unnamed protein product [Homo sapiens]
Length = 518
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 93/169 (55%), Gaps = 33/169 (19%)
Query: 185 VSNDLVNSFHLLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIIS 243
+S+DLVNS+HLL+ DL+Y N +Q S +++VNP+F+G+ +F P DPPCII
Sbjct: 2 ISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDFHAKDSKPSSDPPCIIE 61
Query: 244 ILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIP 303
LC HDG L ++ I +H W P + + +
Sbjct: 62 KLCSLHDGLVL---------EAKGIKEHF------------W---KPYIRKLYE------ 91
Query: 304 GCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
++ L+G E+L+ LEP NF +FK +NK YEEY+LSVG+ DERIFL
Sbjct: 92 --KKLLKGKEENLTGFLEPGNFGESFKAINKAYEEYVLSVGNLDERIFL 138
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW SPLW+ I D+ +P CE+
Sbjct: 354 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWEKIRDNENRVPTCEE 405
>gi|390353367|ref|XP_792215.3| PREDICTED: retinoblastoma-like protein 1-like [Strongylocentrotus
purpuratus]
Length = 527
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 101/193 (52%), Gaps = 32/193 (16%)
Query: 175 FVLTKAEYLDVSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAP 234
F + + +S+DLVNS+HLL+ + DL++AN + + RD++NP+F+G+P + +
Sbjct: 15 FRVPSGNFPAISDDLVNSYHLLLCSLDLMFANAVLANRRDLLNPEFQGLPEGYTSRDYRV 74
Query: 235 LDDPPCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKN 294
+ PCII LC+ HDG L E + ++ W + + K
Sbjct: 75 PSEAPCIIDKLCEVHDGLVL---------------------EAKSINEHYWKPH--IQKL 111
Query: 295 IEDSGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFLPK 354
I+D + L GN+E LS IL+ NF+ N K + K YEEY+L++GDFDERIFL K
Sbjct: 112 IDD---------EDLEGNLEKLSNILDTNNFESNNKSICKNYEEYVLTIGDFDERIFLDK 162
Query: 355 FQSFDETAPGSSG 367
+ P S
Sbjct: 163 DADEEIGTPSKSA 175
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 37/51 (72%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCE 306
+I+RAE LSRDIVKHLN EE +L AW S+SPLW +++S Q +P CE
Sbjct: 368 LILRAEEGLSRDIVKHLNFIEEAILQDYAWRSDSPLWDLLQESNQGVPTCE 418
>gi|402583766|gb|EJW77709.1| hypothetical protein WUBG_11382, partial [Wuchereria bancrofti]
Length = 319
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 155/319 (48%), Gaps = 59/319 (18%)
Query: 45 GSQLHWLGCSLYVSCRKATVPTVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADM 104
G QL W C++Y+S + ++ + L LLK CK+S+ +F +K KW +M
Sbjct: 1 GKQLTWYACAVYLSMWQGSLL-----ENVVPKKYSLAELLKICKLSVLEFFDKATKWVEM 55
Query: 105 RKLPDSFRSKIARLERNFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTS 164
P + I+R++ + AV+ V+F K LP+F+++F PP +E + K ++C
Sbjct: 56 INGPRRLKDHISRVQSSLAVAAVVFKKLLPIFRKIFAPPCSNE-----NDDDVKGLNC-- 108
Query: 165 TKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMP 224
K+F W LF++ + ++ S+DL+NSFHLL+ T D I+ ++ +S++ +++ DF
Sbjct: 109 KKLFSLLWTLFIVMRKQF--NSDDLMNSFHLLLCTVDFIFQDLRRSEMTSLLDGDF---- 162
Query: 225 SNFLDSHFAPLDDPPCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLA 284
N +D + I+ LC+ +G V++ A KH +
Sbjct: 163 LNAVDMQ----QEEDSILETLCQIFEG----VVLDA---------KHFR--------THC 197
Query: 285 WVSNSPLWKNIEDSGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVG 344
W+ P + + E+K EDL+ E N K ++ +YEE I+ G
Sbjct: 198 WL---PRMRRMS---------EEKTIEAGEDLTNFAANEFI--NKKKLDGIYEELIVKRG 243
Query: 345 DFDERIFLPKFQS--FDET 361
+ DER+FLP S FDE
Sbjct: 244 EMDERMFLPADISVVFDEA 262
>gi|149032674|gb|EDL87544.1| retinoblastoma-like 2, isoform CRA_c [Rattus norvegicus]
Length = 951
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 96/178 (53%), Gaps = 37/178 (20%)
Query: 178 TKAEYLDVSNDLVNSFHLLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNF--LDSHFAP 234
++ + +S+DLVNS+HLL+ DL+Y N +Q S +++VNP+F+G+ + DSH P
Sbjct: 24 SRGNFPMISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGVSEDGHPRDSH--P 81
Query: 235 LDDPPCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKN 294
DPPC+I LC HDG L ++ I +H W P +
Sbjct: 82 SSDPPCVIEKLCSLHDGLVL---------EAKGIKQHF------------W---KPYIRK 117
Query: 295 IEDSGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+ + ++ LRG E+L+ LEP NF +FK VNK YEEY+L+ G DERIFL
Sbjct: 118 LFE--------KKLLRGKEENLTGFLEPGNFAESFKAVNKAYEEYVLATGSLDERIFL 167
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW + SPLW I D+ +P CE+
Sbjct: 383 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKTKSPLWDRIRDNENRVPTCEE 434
>gi|15010466|gb|AAK77281.1| GH05946p [Drosophila melanogaster]
Length = 722
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 135/291 (46%), Gaps = 55/291 (18%)
Query: 104 MRKLPDSFRSKIARLERNFAVSKVIFTKYLPMFKEMFK-PPDLDE----LLMHVRHNKKK 158
M LP F ++I L+R F+++ ++ ++ + +F PP+ + + +H H K
Sbjct: 1 MANLPQEFVNEIEDLDRKFSITFMLHKRFRIIMDMIFSCPPNEKKHSKYISLHGNHAHGK 60
Query: 159 MIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNP 218
C+ K+ + W LF+ K + + DLV S++L+I DLIY NV+ K D++NP
Sbjct: 61 ---CSYIKLDDICWRLFLCAKNQKPSNTVDLVTSYNLMICCIDLIYNNVLAEKRTDLINP 117
Query: 219 DFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQ 278
FEG+PSN+ + F +P CI+S C + K +A+ R Q
Sbjct: 118 KFEGLPSNWTELDFR--HNPHCILSNFCDMTEEAKA-----MKATTFR-----------Q 159
Query: 279 VLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEE 338
++ S S + GN + + +L ENF+ N K +N YE+
Sbjct: 160 IMSSFFQAST--------------------IYGNKDTMLGLLANENFERNLKSLNISYEQ 199
Query: 339 YILSVGDFDERIFLPKFQSFDETA--------PGSSGPGLDDLSPAPAPGG 381
Y+LSVG+FDERI L + + + TA P + DL PA G
Sbjct: 200 YVLSVGEFDERI-LSAYDAGEHTALNDQSLRPPVTPLTRKQDLPAQPAMAG 249
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 13/65 (20%)
Query: 241 IISILCKH--HDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDS 298
II I+ +H H+GC L+R ++KHLN EE L+ LAW NS +W+ I +
Sbjct: 392 IIEIVVRHGSHEGC-----------LNRSLIKHLNSIEETCLERLAWARNSTVWEMIASA 440
Query: 299 GQEIP 303
+P
Sbjct: 441 QLPLP 445
>gi|148679123|gb|EDL11070.1| retinoblastoma-like 2, isoform CRA_a [Mus musculus]
Length = 956
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 90/169 (53%), Gaps = 33/169 (19%)
Query: 185 VSNDLVNSFHLLIATCDLIYANVIQ-SKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIIS 243
+S+DLVNS+HLL+ DL+Y N +Q S +++VNP+F+G+ + DPPC+I
Sbjct: 36 ISDDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDCHPKDSKASSDPPCVIE 95
Query: 244 ILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIP 303
LC HDG L ++ I +H W P + + +
Sbjct: 96 KLCSLHDGLVL---------EAKGIKEHF------------W---KPYIRKLFE------ 125
Query: 304 GCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
++ L+G E+L+ LEP NF +FK VNK YEEY+L+ G+ DER+FL
Sbjct: 126 --KKLLKGKEENLTGFLEPGNFGESFKAVNKAYEEYVLAAGNLDERVFL 172
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW + SPLW I D+ +P CE+
Sbjct: 388 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKTKSPLWDRIRDNENRVPTCEE 439
>gi|449669985|ref|XP_004207166.1| PREDICTED: retinoblastoma-like protein 1-like [Hydra
magnipapillata]
Length = 601
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 100/191 (52%), Gaps = 34/191 (17%)
Query: 163 TSTKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCDLIYANVIQSK-LRDIVNPDFE 221
TS + +F W L++ KA+Y D+S+DLVNS+HLL+ DL++AN + SK L+ +N +
Sbjct: 75 TSKDIRDFCWCLYIQVKAQYPDISDDLVNSYHLLLCCIDLVFANTLSSKKLKSSINKTYN 134
Query: 222 GMPSNFLDSHFAPLDDPPCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLD 281
G+P FLD ++ + P I+ LC H+G + E +V
Sbjct: 135 GLPEGFLDRDYSACE-IPSILDNLCNTHEGLAI---------------------ETKV-- 170
Query: 282 SLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYIL 341
+ L K +ED ++ L+GN E + +L +NFD N K +N MY++ I+
Sbjct: 171 ----IKRQYLGKFLEDLLKD-----NVLQGNFEQKTQLLSSKNFDINLKQLNTMYQKRII 221
Query: 342 SVGDFDERIFL 352
G+ DERIF+
Sbjct: 222 KSGEIDERIFI 232
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 38/52 (73%), Gaps = 3/52 (5%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
+++R + LSRD++KHL+ EEQ+L++L+W S SP++ IE G +P C++
Sbjct: 374 LVIRGQ-DLSRDVIKHLSKIEEQILETLSWKSGSPVFTAIESHG--VPICQE 422
>gi|393904812|gb|EJD73805.1| retinoblastoma-associated protein A domain-containing protein [Loa
loa]
Length = 827
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 140/285 (49%), Gaps = 57/285 (20%)
Query: 80 LTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLPMFKEM 139
L LL+ CK+S+ +F +K KW +M P + I R++ + AV+ V+F K LP+F+++
Sbjct: 17 LAKLLRICKISVLEFFDKATKWVEMINGPRRLKDHINRVQSSLAVAAVVFKKLLPIFRKI 76
Query: 140 FKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIAT 199
F PP ++ + K ++C K+F W LF++ + ++ S+DL+NSFHLL+ T
Sbjct: 77 FAPPCSND------DDNSKDLNC--KKLFTLLWTLFIVMRKQF--NSDDLMNSFHLLLCT 126
Query: 200 CDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGCKL-CVIV 258
D I+ ++ +S++ +++ DF N ++ P +D I+ LC+ +G L
Sbjct: 127 VDFIFQDLRRSEMASLLDGDF----INAIE--MQPEED--SILETLCQIFEGVVLDAKHF 178
Query: 259 RAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIEDLSA 318
RA L R ++EE+ +++ ++N + I
Sbjct: 179 RAHCWLPR----MRRMSEEKSIETGEHLTNFAANELI----------------------- 211
Query: 319 ILEPENFDYNFKVVNKMYEEYILSVGDFDERIFLPKFQS--FDET 361
N K ++ MYEE I+ G+ DER+FLP S FDE
Sbjct: 212 ---------NKKKLDSMYEELIVKRGEMDERMFLPADISVVFDEA 247
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 37/51 (72%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCE 306
+I+RA++SLSR++VKHLN EE+VL+ AW +SPLW ++ ++P +
Sbjct: 447 LIIRADSSLSREMVKHLNKVEERVLEEFAWSLDSPLWPSLHRRADDVPSSQ 497
>gi|432101428|gb|ELK29610.1| Retinoblastoma-like protein 1 [Myotis davidii]
Length = 1931
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 91/169 (53%), Gaps = 38/169 (22%)
Query: 185 VSNDLVNSFHLLIATCDLIYANVIQSKLR-DIVNPDFEGMPSNFLDSHFAPLDDPPCIIS 243
+ +DLVNS+HLL+ DLI+AN I R D++NP F+G+PS+F + F ++PPCII+
Sbjct: 1069 IGDDLVNSYHLLLCCLDLIFANAIICPNRGDLLNPSFKGLPSDFHTADFRAPEEPPCIIA 1128
Query: 244 ILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIP 303
+LC HDG ++V A+ I +H P + D
Sbjct: 1129 VLCDLHDG----LLVEAKG-----IKEHY---------------FKPYISKLFD------ 1158
Query: 304 GCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+ L+G +L+ NF N K VNK YEEY+L+VGDFDERIFL
Sbjct: 1159 --RKILKGE-----CLLDFSNFTDNSKAVNKEYEEYVLTVGDFDERIFL 1200
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 40/52 (76%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++R+E LSRD+VKHLN EEQ+L+SLAW +S LW+ ++ S ++P CE+
Sbjct: 1417 VVIRSEEGLSRDMVKHLNSIEEQILESLAWNHDSALWEALQASANKVPTCEE 1468
>gi|312094649|ref|XP_003148094.1| hypothetical protein LOAG_12534 [Loa loa]
Length = 465
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 138/285 (48%), Gaps = 57/285 (20%)
Query: 80 LTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLPMFKEM 139
L LL+ CK+S+ +F +K KW +M P + I R++ + AV+ V+F K LP+F+++
Sbjct: 17 LAKLLRICKISVLEFFDKATKWVEMINGPRRLKDHINRVQSSLAVAAVVFKKLLPIFRKI 76
Query: 140 FKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIAT 199
F PP ++ + K ++C K+F W LF++ + ++ S+DL+NSFHLL+ T
Sbjct: 77 FAPPCSND------DDNSKDLNC--KKLFTLLWTLFIVMRKQF--NSDDLMNSFHLLLCT 126
Query: 200 CDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGCKL-CVIV 258
D I+ ++ +S++ +++ DF P +D I+ LC+ +G L
Sbjct: 127 VDFIFQDLRRSEMASLLDGDFINAI------EMQPEEDS--ILETLCQIFEGVVLDAKHF 178
Query: 259 RAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIEDLSA 318
RA L R ++EE+ +++ ++N + E+
Sbjct: 179 RAHCWLPR----MRRMSEEKSIETGEHLTNF--------AANEL---------------- 210
Query: 319 ILEPENFDYNFKVVNKMYEEYILSVGDFDERIFLPKFQS--FDET 361
N K ++ MYEE I+ G+ DER+FLP S FDE
Sbjct: 211 --------INKKKLDSMYEELIVKRGEMDERMFLPADISVVFDEA 247
>gi|449669987|ref|XP_004207167.1| PREDICTED: retinoblastoma-like protein 2-like [Hydra
magnipapillata]
Length = 176
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 81/135 (60%), Gaps = 6/135 (4%)
Query: 8 ETAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATV--P 65
++ +E+C +++ DS +EAW+ Y+++ + TLEG LHWL C+ Y++ K T+
Sbjct: 18 KSKQSFEEICHSIDADSVFLEEAWSVYEKLIQNITLEGDSLHWLTCAYYITYIKTTLLPG 77
Query: 66 TVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVS 125
V ++R + L++LL K+SL QF K R + +M K KI +LERNF+VS
Sbjct: 78 QVKADRPS----LHLSNLLGKVKLSLLQFFQKVRSFLEMVKYEIDINQKIDQLERNFSVS 133
Query: 126 KVIFTKYLPMFKEMF 140
++F KYL +FK ++
Sbjct: 134 SIVFEKYLTIFKSIY 148
>gi|195054599|ref|XP_001994212.1| GH23495 [Drosophila grimshawi]
gi|193896082|gb|EDV94948.1| GH23495 [Drosophila grimshawi]
Length = 769
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/351 (19%), Positives = 151/351 (43%), Gaps = 53/351 (15%)
Query: 17 CMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVN-------- 68
C L I++ + A + +++ L WL C++Y ++A +
Sbjct: 14 CQKLEIETIIWQNAIKTFHKLNSDGYLTSEAKDWLCCAIYCELQQAKIKNTRQEAEAGDD 73
Query: 69 -SNRTIEGNL--VCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVS 125
+++ + GN + LT LL+ +++ +FL + W + + + +I ++R+ ++
Sbjct: 74 PASKKVNGNSWNISLTKLLRRMGINIMRFLKRMEHWIYLAQSSAISQKEIVDIKRHLGIN 133
Query: 126 KVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEY-LD 184
+++ Y +F++++ P E + V+EF W+LF+ + + +
Sbjct: 134 RLLLQHYKHLFRKLYVLPPATETESRSHYQM----------VYEFGWLLFLAARNDLPVV 183
Query: 185 VSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISI 244
VS+ LV +L+ +L+Y N ++ DI+N +F+G+P+N+ F I +
Sbjct: 184 VSSCLVTGCQVLVCALELVYVNALEVPSSDIINAEFKGLPTNWSCGDFD--------IDL 235
Query: 245 LCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPG 304
L + +C ++ +S S +++ + + V+
Sbjct: 236 LRNYSALEAICELIPELSSKSVSMMR--KIFHKAVMSMFM-------------------- 273
Query: 305 CEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFLPKF 355
+Q+L GN L +++ + N +N Y +++ + + DERI L F
Sbjct: 274 -DQRLLGNDRSLRHLIKDGILEVNLASLNSSYAQHVSDITEIDERILLTHF 323
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLW 292
V+ L+R++ KHL E + LDSL W NSPLW
Sbjct: 495 VVTHGRHLLTRNLAKHLGDLEVRCLDSLIWQRNSPLW 531
>gi|195501123|ref|XP_002097668.1| GE24354 [Drosophila yakuba]
gi|194183769|gb|EDW97380.1| GE24354 [Drosophila yakuba]
Length = 783
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/375 (21%), Positives = 155/375 (41%), Gaps = 59/375 (15%)
Query: 17 CMALNIDSTTAKEAWNAYKEMSHHYTL---EGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
C L ++ + A + Y + L EG WL C++Y ++ + + T
Sbjct: 21 CEQLELEPKIQQSALSTYHRLDADGGLSTSEGDAQEWLCCAVYSELQRLKMRDIREESTN 80
Query: 74 EGN---------LVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAV 124
E N + LT LL+ K++++QFL + W + + ++F+ ++ L R +
Sbjct: 81 EANDSVAKNSCWNMSLTRLLRSFKVNVSQFLRRMEHWNWLTQNENTFQLEVEDLRRRLGI 140
Query: 125 SKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLD 184
+ + Y +F+ +F PD D + H + ++EF W+LF++ + E
Sbjct: 141 TLTLLRHYKHIFRSLFVQPDKDADPDALNHYQA---------LYEFGWLLFLVIRNELPG 191
Query: 185 -VSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIIS 243
+ +L+N +L+ T DL++ N ++ ++ +F G+P + F P +
Sbjct: 192 FATTNLINGCQVLVCTMDLLFVNALEVPQSVVIRREFSGVPRKWDTKDFNP--------T 243
Query: 244 ILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIP 303
+L K+ A +L L E + + + N+ K + +
Sbjct: 244 LLNKYS----------ALEALG-------ELIPELPVKGVMQMKNAFFHKAL-----MLL 281
Query: 304 GCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFLPKFQSFDETAP 363
+ L G+ + I++ D N +N+ Y ++ + + DER+ L FQ ET
Sbjct: 282 YMDHSLVGDDTHMREIVKEGMLDINLANLNRKYTNHVADISEMDERVLLS-FQGTMETKE 340
Query: 364 GSSGPGLDDLSPAPA 378
S +SP PA
Sbjct: 341 DSQ------ISPLPA 349
>gi|194901176|ref|XP_001980128.1| GG16967 [Drosophila erecta]
gi|190651831|gb|EDV49086.1| GG16967 [Drosophila erecta]
Length = 780
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/365 (20%), Positives = 150/365 (41%), Gaps = 52/365 (14%)
Query: 17 CMALNIDSTTAKEAWNAYKEMSHHYTL---EGSQLHWLGCSLYVSCRKATVPTVNSNRTI 73
C L ++ + A + Y + L EG WL CS+Y ++ + + T
Sbjct: 21 CEQLELEPRIQQSALSTYYRLDADGGLSTSEGDAQEWLCCSVYSELQRLKMRDIREESTS 80
Query: 74 EGN---------LVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAV 124
E N + LT LL+ K++++QFL + W + + ++F+ +I L R +
Sbjct: 81 EANDSVAKNSCWNMSLTRLLRSFKVNVSQFLRRMEHWNWLTENENTFQLEIEELRRRLGI 140
Query: 125 SKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLD 184
+ + Y +F+ +F P D + H + ++EF W+LF++ + E
Sbjct: 141 TMTLLRHYKHIFRSLFVQPGKDADPDDLNHYQA---------LYEFGWLLFLVIRNELPG 191
Query: 185 -VSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIIS 243
+ +L+N +L+ T DL++ N ++ ++ +F G+P + F P +
Sbjct: 192 FATTNLINGCQVLVCTMDLLFVNALEVAQSVVIRREFSGVPKKWDSKDFNP--------T 243
Query: 244 ILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIP 303
+L K+ A ++ L E + + + N+ K + +
Sbjct: 244 LLNKYS----------ALEAMG-------ELIPELPVKGVVQMKNAFFHKAL-----MLL 281
Query: 304 GCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFLPKFQSFDETAP 363
+ L G+ + I++ D N +N+ Y ++ + + DER+ L ++ E +
Sbjct: 282 YMDHSLVGDDTHMRKIVKEGMLDINLANLNRKYTNHVADISEMDERVLLSVQRATKEDSQ 341
Query: 364 GSSGP 368
S P
Sbjct: 342 RSPPP 346
>gi|195110157|ref|XP_001999648.1| GI22956 [Drosophila mojavensis]
gi|193916242|gb|EDW15109.1| GI22956 [Drosophila mojavensis]
Length = 792
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/357 (19%), Positives = 145/357 (40%), Gaps = 62/357 (17%)
Query: 15 ELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATV---------- 64
E C L ID + ++A + +++ L WL C++Y ++ +
Sbjct: 16 ENCQMLKIDQSIWQKATKTFHKLNADGVLSSEADDWLCCAIYSELQQTKMKDMRQEEDTT 75
Query: 65 --------PTVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIA 116
P R+ N + LT LL+ +++ +FL + W + + + F+ +I
Sbjct: 76 SKSDNDLEPWEKKTRSNSWN-ISLTQLLRSFNINITKFLKRMEHWNWIAQSSEVFQQEIN 134
Query: 117 RLERNFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFV 176
LER ++ ++ Y +F +++ P E H + ++EF W+LF+
Sbjct: 135 DLERRLGITLLLQQHYKRIFNQLYVQPSTAESRAHYQM------------LYEFGWLLFL 182
Query: 177 LTKAEYLD-VSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPL 235
+ + E + ++VN +L+ T +L+Y N ++ D++N F G+PS + ++ F
Sbjct: 183 VVRNELPSFATTNIVNGCQVLVCTLELVYVNALEVHKSDVINTSFVGVPSKWSNNDFDT- 241
Query: 236 DDPPCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNI 295
+L K+ +C L E + + N+ K +
Sbjct: 242 -------DMLLKYSALDAIC-----------------GLIPELPVKGARIMKNAFFHKAV 277
Query: 296 EDSGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+Q+L GN + +++ + N +N+ Y ++ + + DERI L
Sbjct: 278 MG-----LFMDQRLLGNDRAMRELVKDGILEVNLTSLNRSYAVHVSDISEIDERILL 329
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 256 VIVRAEASL-SRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSG 299
++VR E+ L +RD++KHL E Q L L W +S LW+ ++ +G
Sbjct: 508 LVVRHESGLLTRDLIKHLQEIETQCLTKLIWQKSSQLWRYVDSAG 552
>gi|195452176|ref|XP_002073245.1| GK14024 [Drosophila willistoni]
gi|194169330|gb|EDW84231.1| GK14024 [Drosophila willistoni]
Length = 807
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/366 (20%), Positives = 150/366 (40%), Gaps = 63/366 (17%)
Query: 15 ELCMALNIDSTTAKEAWNAYKEM-SHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNR-T 72
++C L + S + A + Y+ S L W CS+Y ++A + + S R T
Sbjct: 21 QICEPLELSSYIKQNALDTYRRYNSDGGLLSADAQEWFCCSVYSCLQQAKMKDMRSKRQT 80
Query: 73 IEGNL-----------------VCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKI 115
G+ + LT LL+ +M++ +FL + W + + +F+ +I
Sbjct: 81 ANGDEQEVDTATTGMERTKSWNMSLTRLLRCFQMNMTKFLKRMEHWNWLTQQDRTFQQEI 140
Query: 116 ARLERNFAVSKVIFTKYLPMFKEMFK-PPDLDELLMHVRHNKKKMIHCTSTKVFEFTWIL 174
L+R +++ +I Y +F +F P D+ + R + + + +EF WIL
Sbjct: 141 VELQRRMSITMIIQQHYQNIFNHLFVLPKDVGQEGDDGRSHYQTL--------YEFGWIL 192
Query: 175 FVLTKAEYLD-VSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHF- 232
F++ + E V+ +LVN LLI +L+Y N ++ ++N F G+P ++ F
Sbjct: 193 FLVLRNELPSFVTENLVNGCQLLICVVELVYVNALEVIGSIVINQSFPGLPKDWPSPEFD 252
Query: 233 -APLDDPPCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPL 291
LD + SI+ + + + + +A + ++
Sbjct: 253 SNKLDKWSALPSIMALMPELPEKGIRIMQKAFFQKSLM---------------------- 290
Query: 292 WKNIEDSGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIF 351
+ +Q+L GN +++ + N +N+ Y +I + + DER+
Sbjct: 291 ----------VLFMDQRLLGNDNTFRDLVKDGILEINLAALNRSYVHHIADISEMDERVL 340
Query: 352 LPKFQS 357
L + Q
Sbjct: 341 LCRKQG 346
Score = 38.1 bits (87), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 256 VIVRAEASL-SRDIVKHLNLTEEQVLDSLAWVSNSPLWKNI-EDSGQEIPGCEQ 307
++VR SL SR +VKHL+L EE+ L+SL + ++S WK D G +P ++
Sbjct: 503 LVVRHHNSLLSRQLVKHLHLVEEKCLESLIFRNSSQFWKCFSSDWGSSLPSAKE 556
>gi|125776429|ref|XP_001359274.1| GA18648 [Drosophila pseudoobscura pseudoobscura]
gi|54639017|gb|EAL28419.1| GA18648 [Drosophila pseudoobscura pseudoobscura]
Length = 781
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 151/351 (43%), Gaps = 54/351 (15%)
Query: 17 CMALNIDSTTAKEAWNAYKEMSHHYTLEGSQ--LHWLGCSLYVSCRKATVPTVNSNRTI- 73
C L++D +A A+++ + L + WL C++Y ++ + + + I
Sbjct: 21 CDMLDLDPAIKLKALAAFQQSTSDGGLTEKRDVQEWLCCAVYCELQRVKIKDMLDAKLIT 80
Query: 74 --------EGNLVC----LTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERN 121
+ C LT LL K+++NQF+ + ++W + K F+ +I L R
Sbjct: 81 DYPTNAAEKAGTSCWNLSLTKLLAAFKVNINQFMERMKQWNVLVKNEKVFQQEIDDLHRR 140
Query: 122 FAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAE 181
++ +I Y +F +F P+ D + + + IH T ++EF W+LF+ + E
Sbjct: 141 LCMTLIIRKHYQRLFDRLFVLPEED-----TENVEARSIH---TSLYEFGWLLFLTIRNE 192
Query: 182 YLD-VSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPC 240
+++LV+ +LI T +L+Y N ++ ++N F G+PS + F DD
Sbjct: 193 LPGFATSNLVSGCQVLICTLELLYVNALEMGNAWVINRTFPGVPSKWGSDDF---DD--- 246
Query: 241 IISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQ 300
+L K+ ++C ++ L R V+ + N+ K +
Sbjct: 247 --GLLLKYSALEEICSLI---PDLPRKGVRVMK--------------NAFFHKAL----- 282
Query: 301 EIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIF 351
+ +Q L GN + I++ D N +N+ Y ++ + + DER
Sbjct: 283 VVLFSDQNLLGNDTFMREIIKEGLLDVNLATLNRNYTNHVADISEIDERFL 333
>gi|195152251|ref|XP_002017050.1| GL22085 [Drosophila persimilis]
gi|194112107|gb|EDW34150.1| GL22085 [Drosophila persimilis]
Length = 781
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 149/355 (41%), Gaps = 62/355 (17%)
Query: 17 CMALNIDSTTAKEAWNAYKEMSHHYTLEGSQ--LHWLGCSLYVSCRKATVPTVNSNRTI- 73
C L++D +A A+++ + L + WL C++Y ++ + + + I
Sbjct: 21 CDMLDLDPAIKLKALAAFQQSTSDGGLTEKRDVQEWLCCAVYCELQRVKIKDMLDAKLIT 80
Query: 74 --------EGNLVC----LTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERN 121
+ C LT LL K+++NQF+ + ++W + K F+ +I L R
Sbjct: 81 DYPTNAAEKAGTSCWNLSLTKLLAAFKVNINQFMERMKQWNVLVKNEKVFQQEIDDLHRR 140
Query: 122 FAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAE 181
++ +I Y +F +F P+ D + + + IH T ++EF W+LF+ + E
Sbjct: 141 LCMTLIIRKHYQRVFDRLFVLPEED-----TENVEARSIH---TSLYEFGWLLFLTIRNE 192
Query: 182 YLD-VSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPC 240
+++LV+ +LI T +L+Y N ++ ++N F G+P + F DD
Sbjct: 193 LPGFATSNLVSGCQVLICTLELLYVNALEMGNAWVINRRFPGVPRKWGSDDF---DD--- 246
Query: 241 IISILCKHHDGCKLCVIV----RAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
+L ++ ++C ++ R + ++ H L VL S
Sbjct: 247 --GLLLRYSALEEICSLIPDLPRKGVRVMKNAFFHKALV---VLFS-------------- 287
Query: 297 DSGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIF 351
+Q L GN + I++ D N +N+ Y ++ + + DER
Sbjct: 288 ---------DQNLLGNDTFMREIIKEGLLDVNLATLNRNYTNHVADISEIDERFL 333
>gi|7673363|gb|AAF66827.1|AF195899_1 RB-related protein RBF2 [Drosophila melanogaster]
Length = 782
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 106/231 (45%), Gaps = 21/231 (9%)
Query: 17 CMALNIDSTTAKEAWNAYKEM---SHHYTLEGSQLHWLGCSLYVSCRKATVPTVN----- 68
C L +++ + A + Y + + T E WL C++Y +++ + +
Sbjct: 21 CEQLELEARIQQSALSTYHRLDAVNGLSTSEADAQEWLCCAVYSELQRSKMRDIRESINE 80
Query: 69 SNRTIEGNL---VCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVS 125
+N ++ N V LT LL+ KM+++QFL + W + + ++F+ ++ L ++
Sbjct: 81 ANDSVAKNCCWNVSLTRLLRSFKMNVSQFLRRMEHWNWLTQNENTFQLEVEELRCRLGIT 140
Query: 126 KVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDV 185
+ Y +F+ +F P H + ++EF W+LF++ + E
Sbjct: 141 STLLRHYKHIFRSLFVHPGKGADPGAANHYQ---------ALYEFGWLLFLVIRNELPGF 191
Query: 186 S-NDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPL 235
+ +L+N +L+ T DL++ N ++ ++ +F G+P N+ F P+
Sbjct: 192 AITNLINGCQVLVCTMDLLFVNALEVPRSVVIRREFSGVPKNWDTEDFNPI 242
>gi|195389132|ref|XP_002053231.1| GJ23772 [Drosophila virilis]
gi|194151317|gb|EDW66751.1| GJ23772 [Drosophila virilis]
Length = 792
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/352 (19%), Positives = 147/352 (41%), Gaps = 58/352 (16%)
Query: 17 CMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSC--------RKATVPT-V 67
C L I+ ++A + +++ L WL C++Y R+ V T
Sbjct: 17 CQKLKIEEIIWQKAIKTFHKLNVDGVLSNEADDWLCCAVYSELQQTKMKDMRQEVVNTKT 76
Query: 68 NSNRTIEGNLVC------LTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERN 121
+ N + C LT LL+ +++N+FL + W + + + F+ ++ LER
Sbjct: 77 DENEPWDKKARCQSWNISLTKLLRSFGININKFLKRMEHWNWLAQNGEVFQQEVNDLERR 136
Query: 122 FAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAE 181
++ ++ Y +F++++ P + H + ++EF W+LF++ + E
Sbjct: 137 LGITLLLLQHYKRIFQKLYVLPATADSRAHYQ------------MIYEFGWLLFLVVRNE 184
Query: 182 YLD-VSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPC 240
+ +L+N +L+ +L+Y N ++ D++N F+G+P ++ + F
Sbjct: 185 LPPFATTNLINGCQVLVCALELVYVNALEVYKSDVINTAFQGVPPSWCNKDFD------- 237
Query: 241 IISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQ 300
I +L K+ +C ++ + I+K N+ K +
Sbjct: 238 -IDLLHKYSAMDAICGLIPELPAKGARIMK-----------------NAFFHKAVMGLFM 279
Query: 301 EIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+Q+L GN + +++ + N +N+ Y ++ + + DER+ L
Sbjct: 280 -----DQRLLGNDRVMRELIKDGILEVNLASLNRSYAVHVSDISEIDERVLL 326
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Query: 256 VIVRAEASL-SRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCE 306
++VR E L +RD++KHL+ E Q L SL W +NS LW+ +G +P C+
Sbjct: 506 LVVRHECGLLTRDLIKHLHDIEAQCLTSLIWQNNSQLWRIYASTG--LPRCQ 555
>gi|17737995|ref|NP_524372.1| Retinoblastoma-family protein 2 [Drosophila melanogaster]
gi|7416991|gb|AAF62399.1|AF197059_1 retinoblastoma protein homolog RBF2 [Drosophila melanogaster]
gi|7300089|gb|AAF55258.1| Retinoblastoma-family protein 2 [Drosophila melanogaster]
gi|17945750|gb|AAL48923.1| RE32990p [Drosophila melanogaster]
gi|220948322|gb|ACL86704.1| Rbf2-PA [synthetic construct]
Length = 783
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 106/231 (45%), Gaps = 21/231 (9%)
Query: 17 CMALNIDSTTAKEAWNAYKEM---SHHYTLEGSQLHWLGCSLYVSCRKATVPTVN----- 68
C L +++ + A + Y + + T E WL C++Y +++ + +
Sbjct: 21 CEQLELEARIQQSALSTYHRLDAVNGLSTSEADAQEWLCCAVYSELQRSKMRDIRESINE 80
Query: 69 SNRTIEGNL---VCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVS 125
+N ++ N V LT LL+ KM+++QFL + W + + ++F+ ++ L ++
Sbjct: 81 ANDSVAKNCCWNVSLTRLLRSFKMNVSQFLRRMEHWNWLTQNENTFQLEVEELRCRLGIT 140
Query: 126 KVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDV 185
+ Y +F+ +F P H + ++EF W+LF++ + E
Sbjct: 141 STLLRHYKHIFRSLFVHPGKGADPGAANHYQ---------ALYEFGWLLFLVIRNELPGF 191
Query: 186 S-NDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPL 235
+ +L+N +L+ T DL++ N ++ ++ +F G+P N+ F P+
Sbjct: 192 AITNLINGCQVLVCTMDLLFVNALEVPRSVVIRREFSGVPKNWDTEDFNPI 242
>gi|440803455|gb|ELR24357.1| Retinoblastomaassociated protein A domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 1109
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 133/343 (38%), Gaps = 79/343 (23%)
Query: 19 ALNIDSTTAKEAWNAYKEMSHHYTLEGSQ-------LHWLGCSLYVSCRKATVP--TVNS 69
ALN+D T K W+ + + TL+ Q L C+LYV A +P +
Sbjct: 157 ALNLDEETRKIGWSLLRRL----TLKAGQQDEERFVLCMAACALYV----AGMPEQRTPA 208
Query: 70 NRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIF 129
+ T G+ V LT LL+ + L F + + + KL ++ ++ +LER F V +++
Sbjct: 209 STTSGGSCVSLTQLLRATHIRLVDFFDPLKAFIANLKLGAAYEEQLLQLERKFCVICILY 268
Query: 130 TKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDL 189
KY F ++F+ D+ + +F F W+LF++ K + L DL
Sbjct: 269 RKYEKEFFQVFRITDI----------QPGSPDSPYYALFSFGWVLFLVAKGKLLTSPPDL 318
Query: 190 VNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHH 249
+ +FHLL+ + + + E ++ LCK
Sbjct: 319 ITAFHLLLCCVQFVATHAAPETKSTLTGTSGE------------------VALAALCK-Q 359
Query: 250 DGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKL 309
G L +VR EA L +P ++ +DS +
Sbjct: 360 SGASLAEVVRLEADL-----------------------FAPFLQSWKDS---------NV 387
Query: 310 RGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
G D A P ++ ++ + YE S GDFDER+FL
Sbjct: 388 LGATGDSLAFDRPTLKRWS-TMMARDYEIMFHSQGDFDERLFL 429
>gi|195469581|ref|XP_002099715.1| GE16567 [Drosophila yakuba]
gi|194187239|gb|EDX00823.1| GE16567 [Drosophila yakuba]
Length = 635
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 75/167 (44%), Gaps = 39/167 (23%)
Query: 196 LIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGCKLC 255
+I DLIY NV+ K D++NP FEG+PSN+ + F P CI++ C + K
Sbjct: 1 MICCIDLIYNNVLAEKRTDLINPKFEGLPSNWTELDFR--HKPHCILAYFCDMTEEAKAM 58
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIED 315
T Q++ S S + GN +
Sbjct: 59 KAT----------------TFRQIISSFFQAST--------------------IYGNKDT 82
Query: 316 LSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFLPKFQSFDETA 362
+ +L ENF+ N K +N YE+Y+LSVG+FDERI L + + + TA
Sbjct: 83 MLGLLANENFERNLKSLNISYEQYVLSVGEFDERI-LSAYDAGEHTA 128
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 16/83 (19%)
Query: 241 IISILCKH--HDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDS 298
II I+ +H H+GC L+R ++KHLN EE L+ LAW NS +W I
Sbjct: 298 IIEIVVRHGSHEGC-----------LNRSLIKHLNSIEETCLERLAWARNSTVWDMIASF 346
Query: 299 GQEIPGCEQKLRGNIEDLSAILE 321
+P LR N++ + L+
Sbjct: 347 PLPLPTW---LRVNLDRSAGALQ 366
>gi|149032673|gb|EDL87543.1| retinoblastoma-like 2, isoform CRA_b [Rattus norvegicus]
Length = 908
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 60/124 (48%), Gaps = 34/124 (27%)
Query: 229 DSHFAPLDDPPCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSN 288
DSH P DPPC+I LC HDG L ++ I +H W
Sbjct: 35 DSH--PSSDPPCVIEKLCSLHDGLVL---------EAKGIKQHF------------W--- 68
Query: 289 SPLWKNIEDSGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDE 348
P + + + ++ LRG E+L+ LEP NF +FK VNK YEEY+L+ G DE
Sbjct: 69 KPYIRKLFE--------KKLLRGKEENLTGFLEPGNFAESFKAVNKAYEEYVLATGSLDE 120
Query: 349 RIFL 352
RIFL
Sbjct: 121 RIFL 124
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW + SPLW I D+ +P CE+
Sbjct: 340 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKTKSPLWDRIRDNENRVPTCEE 391
>gi|291236043|ref|XP_002737957.1| PREDICTED: retinoblastoma-like protein 1-like, partial
[Saccoglossus kowalevskii]
Length = 855
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Query: 239 PCIISI--LCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P +I I L +H + +++RAE LSRD+VKHLN EEQ+L+SLAW +SPLW+ +
Sbjct: 297 PWVIDIYHLAPYHFYKVIELLIRAEDGLSRDVVKHLNHIEEQILESLAWKYDSPLWEAMR 356
Query: 297 DSGQEIPGCEQ 307
+SG +P CE+
Sbjct: 357 ESGLGVPTCEE 367
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 65/130 (50%), Gaps = 32/130 (24%)
Query: 223 MPSNFLDSHFAPLDDPPCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDS 282
+PSNF + +P CII LC+ HDG ++V A+ I +H
Sbjct: 1 LPSNFTSKDYRVPTEPVCIIDKLCELHDG----LVVEAKG-----IKEH----------- 40
Query: 283 LAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILS 342
W P K + D ++ ++G E+ S +L+ NF+ N K +NK YEEY+L+
Sbjct: 41 --WFK--PYIKKLFD--------KRTIKGKQENYSGLLDVNNFEVNNKSINKEYEEYVLT 88
Query: 343 VGDFDERIFL 352
GDFDERIFL
Sbjct: 89 RGDFDERIFL 98
>gi|194745039|ref|XP_001955000.1| GF18553 [Drosophila ananassae]
gi|190628037|gb|EDV43561.1| GF18553 [Drosophila ananassae]
Length = 786
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/362 (19%), Positives = 142/362 (39%), Gaps = 58/362 (16%)
Query: 17 CMALNIDSTTAKEAWNAYKEMSHHYTLEGS-----QLHWLGCSLYVSCRKATVPTVNSNR 71
C L +D A Y+ +L GS WL CS+Y ++ + +
Sbjct: 21 CELLELDPKIQISAMATYRRFDADGSLAGSGGDDMAQEWLCCSVYSELQRVKIREMREES 80
Query: 72 TIEGNL------------VCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLE 119
+ + LT LL+ K++++QFL + W + + + + ++ L+
Sbjct: 81 KRGAPIDPSDQIKSSCWNLSLTRLLRSFKVNVSQFLRRMEHWNWLAQNEGTLQLEVEELQ 140
Query: 120 RNFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTK 179
R ++ + Y +F+++F P D V ++EF W+LF++ +
Sbjct: 141 RRLGITLTLRKHYKHIFEKLFVQPAEDADSEAV---------ALYMSLYEFGWLLFLVIR 191
Query: 180 AEYLD-VSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDP 238
E ++ LV+ +L+ + DL+Y NV++ +++ DF G+P + F
Sbjct: 192 NELPGFATSSLVSGCQVLVCSMDLLYVNVLEVSRSEVIRRDFAGVPPKWDSEDFDS---- 247
Query: 239 PCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDS 298
++L K+ L IV D++ L + + K
Sbjct: 248 ----TLLTKY---SALEAIV--------DLIPQLPAK-----------GVTQMKKAFFHK 281
Query: 299 GQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFLPKFQSF 358
+ + L GN + I++ D N +N+ Y+ ++ + + DER+ L FQ
Sbjct: 282 ALMVLFMDHILLGNNIHMREIVKEGMLDVNLGTLNRKYDTHVADISEMDERVLLC-FQEL 340
Query: 359 DE 360
E
Sbjct: 341 KE 342
>gi|195570496|ref|XP_002103243.1| GD19061 [Drosophila simulans]
gi|194199170|gb|EDX12746.1| GD19061 [Drosophila simulans]
Length = 779
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 102/231 (44%), Gaps = 21/231 (9%)
Query: 17 CMALNIDSTTAKEAWNAYKEM---SHHYTLEGSQLHWLGCSLY-----VSCRKATVPTVN 68
C L +++ + A + Y+ + S T E WL C++Y V R P
Sbjct: 21 CEQLELEARIQQGALSTYRRLDAVSGLSTSEADAQEWLCCAVYSELQRVKMRDIREPNNE 80
Query: 69 SNRTIEGNL---VCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVS 125
+N + E N + LTSLL+ ++++QFL + W + + + F+ ++ L ++
Sbjct: 81 ANDSEEQNCCWNMSLTSLLRSFNVNMSQFLRRMEHWNWLTQNENIFQLEVEELRCRLGIT 140
Query: 126 KVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLD- 184
+ Y +F+ +F P D ++EF W+LF++ + E
Sbjct: 141 LTLLRHYQHIFRCLFVQPGKD---------ADPDATYQYQALYEFGWLLFLVIRNELPGF 191
Query: 185 VSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPL 235
+ +L+N +L+ T DL++ N ++ ++ +F G+P + F P+
Sbjct: 192 ATTNLINGCQVLVCTMDLLFVNALEVPRSVVIRREFSGVPKKWDTEDFNPI 242
>gi|195328575|ref|XP_002030990.1| GM24273 [Drosophila sechellia]
gi|194119933|gb|EDW41976.1| GM24273 [Drosophila sechellia]
Length = 782
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/380 (19%), Positives = 153/380 (40%), Gaps = 64/380 (16%)
Query: 17 CMALNIDSTTAKEAWNAYKEM---SHHYTLEGSQLHWLGCSLYVSCRKATVPTVN----- 68
C L+++ + A + Y+ + S T E WL C++Y ++ + +
Sbjct: 21 CEQLDLEERIRQGALSTYRRLDAVSGLSTSEADAQEWLCCAVYSELQRVKMRDIRESNNE 80
Query: 69 SNRTIEGNL---VCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVS 125
+N + E N + LTSLL+ K++++QFL + W + + ++F+ ++ L ++
Sbjct: 81 ANDSEEQNFCWNMSLTSLLRSFKVNMSQFLRRMEHWNWLTQNENTFQLEVEELRCRLGIT 140
Query: 126 KVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLD- 184
+ Y +F+ +F P D ++EF W+LF++ + E
Sbjct: 141 LTLLRHYQHIFRCLFVQPGKD---------ADPDATYQYQALYEFGWLLFLVIRNELPGF 191
Query: 185 VSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISI 244
+ +L+N +L+ T D+++ N ++ ++ +F G+P + F P+ +
Sbjct: 192 ATTNLINGCQVLVCTMDILFVNALELPRSVVIRREFSGVPKKWDTEDFNPV--------L 243
Query: 245 LCKHHDGCKLCVIVRAEASL-----SRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSG 299
L K+ ++ A L +R +++ N + L L
Sbjct: 244 LNKYS-------VLEALGELIPELPARGVMQMKNAFFHKALIMLY--------------- 281
Query: 300 QEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFLPKFQSFD 359
+Q L G+ + I++ D N +N+ Y I + + DER+ L + +
Sbjct: 282 -----MDQCLLGDDTHMREIIKEGMLDINLANLNRKYTNQIADISEMDERVLLSVKGAIE 336
Query: 360 ETAPGSSGPGL---DDLSPA 376
P L LSP+
Sbjct: 337 TKEDSPKSPQLAFQTSLSPS 356
>gi|46812636|gb|AAH69179.1| Rbl1 protein, partial [Mus musculus]
Length = 682
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++R+E LSRD+VKHLN EEQ+L+SLAW +NS LW+ + S +P CE+
Sbjct: 158 VVIRSEEGLSRDMVKHLNSIEEQILESLAWTNNSALWEALHASANRVPSCEE 209
>gi|148679124|gb|EDL11071.1| retinoblastoma-like 2, isoform CRA_b [Mus musculus]
Length = 913
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 57/116 (49%), Gaps = 32/116 (27%)
Query: 237 DPPCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
DPPC+I LC HDG L ++ I +H W P + +
Sbjct: 46 DPPCVIEKLCSLHDGLVL---------EAKGIKEHF------------W---KPYIRKLF 81
Query: 297 DSGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
+ ++ L+G E+L+ LEP NF +FK VNK YEEY+L+ G+ DER+FL
Sbjct: 82 E--------KKLLKGKEENLTGFLEPGNFGESFKAVNKAYEEYVLAAGNLDERVFL 129
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW + SPLW I D+ +P CE+
Sbjct: 345 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKTKSPLWDRIRDNENRVPTCEE 396
>gi|355715600|gb|AES05379.1| retinoblastoma-like 1 [Mustela putorius furo]
Length = 493
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 40/52 (76%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V++R+E LSRD+VKHLN EEQ+L+SLAW +S LW+ ++ S ++P CE+
Sbjct: 245 VVIRSEEGLSRDMVKHLNSIEEQILESLAWSHDSALWEALQASANKVPTCEE 296
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/28 (75%), Positives = 23/28 (82%)
Query: 325 FDYNFKVVNKMYEEYILSVGDFDERIFL 352
F N K VNK YEEY+L+VGDFDERIFL
Sbjct: 1 FTDNSKAVNKEYEEYVLTVGDFDERIFL 28
>gi|31873726|emb|CAD97830.1| hypothetical protein [Homo sapiens]
Length = 849
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
V +RAE L R++VKHLN EEQ+LD LAW SPLW+ I D+ +P CE+
Sbjct: 280 VFIRAEDGLCREVVKHLNQIEEQILDHLAWKPESPLWEKIRDNENRVPTCEE 331
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/23 (73%), Positives = 20/23 (86%)
Query: 330 KVVNKMYEEYILSVGDFDERIFL 352
K +NK YEEY+LSVG+ DERIFL
Sbjct: 42 KAINKAYEEYVLSVGNLDERIFL 64
>gi|308498181|ref|XP_003111277.1| CRE-LIN-35 protein [Caenorhabditis remanei]
gi|308240825|gb|EFO84777.1| CRE-LIN-35 protein [Caenorhabditis remanei]
Length = 937
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 140/353 (39%), Gaps = 82/353 (23%)
Query: 17 CMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHW-LGCSLYVSCRKATVPTVNSNRTIEG 75
C+ N+ A +W+ Y S LEGS+ W L Y + R +
Sbjct: 91 CINANLTDDIAVASWDIYYHASQRAALEGSESAWQLSAIYYYLLSRGIKRRGKPARLLTQ 150
Query: 76 NL-VCLTSLLKHCKMSLNQFLNKCRKWAD------MRKLPDSFRSKIARLERNFAVSKVI 128
+ V + ++ +S+ + ++K ++AD MR+ D R R++ AVS VI
Sbjct: 151 RMPVSILTIASTFDVSIAELMDKTVRFADIIHSRKMRRYLDYLR----RIQEGLAVSCVI 206
Query: 129 FTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTST-KVFEFTWILFVLTKAEYLDVSN 187
F K+ ++ +F+ K+ C S+ ++F W F++ K+ ++
Sbjct: 207 FKKFCKVYNGIFE------------QLKEGTDSCPSSHELFTVIWTSFLVMKSRL--QTD 252
Query: 188 DLVNSFHLLIATCDLIYA--NVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISIL 245
DLVN++ LL D IY ++++ + +N F G + +D+ I+ L
Sbjct: 253 DLVNNYQLLFCMIDQIYTKMSLMEEGIIHHLNQKFVG----------SLIDNDSTILRAL 302
Query: 246 CKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGC 305
C GC +LD+ + ++ +K ++ +G +P
Sbjct: 303 CTQFGGC--------------------------ILDTRHFYDHT--YKKMKKTG--VPES 332
Query: 306 EQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFLPKFQSF 358
L E+ D V Y++Y+L G+ DER+F+P F
Sbjct: 333 WDFL-------------EDRDMIINVPKLAYDQYVLQRGNIDERVFIPTHNRF 372
>gi|346464585|gb|AEO32137.1| hypothetical protein [Amblyomma maculatum]
Length = 314
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 39/53 (73%)
Query: 257 IVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKL 309
++RAE L R++VKHLN EEQ+L+ LAW +SPLW+ IE S Q +P C++ L
Sbjct: 64 LIRAEEGLWREVVKHLNHIEEQILECLAWKDDSPLWEAIEHSEQPVPTCKEVL 116
>gi|17508261|ref|NP_491686.1| Protein LIN-35 [Caenorhabditis elegans]
gi|4164606|gb|AAD05570.1| synthetic multivulva protein LIN-35 Rb [Caenorhabditis elegans]
gi|351065894|emb|CCD61908.1| Protein LIN-35 [Caenorhabditis elegans]
Length = 961
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 141/358 (39%), Gaps = 84/358 (23%)
Query: 15 ELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLY-------VSCRKATVPTV 67
E C A N+ + AW Y +LEGS+ W ++Y + R T+ +
Sbjct: 135 EGCRAANLPNDIVTGAWETYNHAVQRVSLEGSESAWQLSAIYYYLLSKGIKRRGKTIRIL 194
Query: 68 NSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADM---RKLPDSFRSKIARLERNFAV 124
I+ V + ++ +S+ + L+K ++ ++ RK+ ++ I R++ AV
Sbjct: 195 -----IQPFPVSILTIANSFDISVAEMLDKTARFVEIIHSRKI-RRYQEYIRRIQEGLAV 248
Query: 125 SKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTST-KVFEFTWILFVLTKAEYL 183
S VIF K+ +F ++F+ K +C S+ ++F W F++ K+
Sbjct: 249 SCVIFKKFCRIFCKIFE------------EIKVGSENCPSSHELFTVLWTSFLVMKSRM- 295
Query: 184 DVSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPC-II 242
+DL++++ LL + D +Y + K EG+ + L + C II
Sbjct: 296 -TVDDLISNYQLLFSILDQVYTEMCSMK---------EGIVHHLNQKFVEDLLENDCTII 345
Query: 243 SILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEI 302
LC G VLD+ + ++ +K +E +G I
Sbjct: 346 RALCTQFGGS--------------------------VLDARHFSDHT--FKKMEKTG--I 375
Query: 303 PGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFLPKFQSFDE 360
P N ++ D V YE Y+L G DERIF+P + F +
Sbjct: 376 PST-----WNFQEFR--------DLIMNVPKTAYENYLLQRGSIDERIFIPSVEDFSK 420
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLW 292
+++ E LSR +V+H + EE V++ +W S+SPLW
Sbjct: 652 LMITHEKQLSRQMVQHFSRIEETVIEYFSWKSDSPLW 688
>gi|320165630|gb|EFW42529.1| retinoblastoma-associated protein B [Capsaspora owczarzaki ATCC
30864]
Length = 1138
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 82/203 (40%), Gaps = 11/203 (5%)
Query: 15 ELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLG---CSLYVSCRKATVPTVNSNR 71
+ C A+NIDS T +AW H +E +++ CSLYVS ++ T++ N
Sbjct: 29 QCCSAVNIDSATRADAWKLLNNTYAHDAIENQSFNFMDAIMCSLYVSGFHRSLTTISGN- 87
Query: 72 TIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTK 131
+ N + + L + S+ FL + + + F +IF K
Sbjct: 88 VVRSNGISPSQLARAANTSIKHFLEVLEVFVSDAHCAEEVVQHARLITTKFGTVSLIFQK 147
Query: 132 YLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTK------VFEFTWILFVLTKAEYL-D 184
Y +F +FK D + +H + +F+ W LF+ KA+ L
Sbjct: 148 YERVFWAIFKAEPADPRSPKSAPHSHTSVHSGQNQPPATALLFKLAWFLFISVKAKCLGS 207
Query: 185 VSNDLVNSFHLLIATCDLIYANV 207
S++LV+S L L+ AN
Sbjct: 208 ASDNLVDSVKFLECCLRLLLANA 230
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 264 LSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCE 306
L R++VKHL EE+++D+LAW + SPL + + + Q +P E
Sbjct: 700 LGREVVKHLGRIEERIVDTLAWKTGSPLLEAVR-AAQGMPHPE 741
>gi|395505445|ref|XP_003757051.1| PREDICTED: retinoblastoma-like protein 1 [Sarcophilus harrisii]
Length = 1040
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 48/79 (60%), Gaps = 12/79 (15%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKL------ 309
+++R+E LSRD VKHLN EEQ+L+SLAW ++S LW + S ++P CE+ +
Sbjct: 514 ILIRSEEGLSRDTVKHLNSIEEQILESLAWSNDSALWDALLISENKVPTCEEVIFPNNLE 573
Query: 310 RGNIED------LSAILEP 322
GN++ LS I+ P
Sbjct: 574 TGNVQGHLPMMPLSPIVHP 592
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 63/131 (48%), Gaps = 37/131 (28%)
Query: 222 GMPSNFLDSHFAPLDDPPCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLD 281
G+P +F S F ++PPCII+ LC+ HDG ++V A+ I +H
Sbjct: 204 GLPPDFHISDFRTSEEPPCIIATLCELHDG----LLVEAKG-----IKEHYF-------- 246
Query: 282 SLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYIL 341
P + D + L+G+ +L+ F N K VNK YEEY+L
Sbjct: 247 -------KPYISKLFD--------RKILKGD-----CLLDISCFADNSKAVNKEYEEYVL 286
Query: 342 SVGDFDERIFL 352
+VGDFDER+FL
Sbjct: 287 TVGDFDERVFL 297
>gi|340384174|ref|XP_003390589.1| PREDICTED: retinoblastoma-like protein 1-like, partial [Amphimedon
queenslandica]
Length = 270
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%)
Query: 75 GNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLP 134
GN + LT +++ K+ L +F K +KW +M KLP + K+ LER F V VIF KY
Sbjct: 8 GNSISLTQIVRTTKIKLIEFFRKIKKWLEMAKLPQLYLEKVETLERKFEVISVIFKKYRR 67
Query: 135 MFKEMFKPPDLD 146
F +F+ D D
Sbjct: 68 EFSTIFQLQDGD 79
>gi|324506107|gb|ADY42615.1| Retinoblastoma-associated protein [Ascaris suum]
Length = 533
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 40/63 (63%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIED 315
+++RAE LSR++VKHLN EE+VL+ LAW +SPLW+ + +P + ++E
Sbjct: 282 LVIRAEPELSREMVKHLNKIEERVLEELAWSVDSPLWQTLARRADGVPSSQSVSLNSMEA 341
Query: 316 LSA 318
SA
Sbjct: 342 YSA 344
>gi|340381696|ref|XP_003389357.1| PREDICTED: retinoblastoma-like protein 1-like, partial [Amphimedon
queenslandica]
Length = 98
Score = 57.4 bits (137), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 39/69 (56%)
Query: 78 VCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLPMFK 137
+ LT +L+ K+ L +F K +KW +M KLP + K+ LER F V VIF KY F
Sbjct: 1 ISLTQILRTTKIKLIEFFRKIKKWLEMAKLPQLYLEKVKTLERKFEVISVIFKKYRREFS 60
Query: 138 EMFKPPDLD 146
+F+ D D
Sbjct: 61 TIFQLQDGD 69
>gi|268565519|ref|XP_002639469.1| C. briggsae CBR-LIN-35 protein [Caenorhabditis briggsae]
Length = 948
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 135/351 (38%), Gaps = 74/351 (21%)
Query: 15 ELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHW-LGCSLYVSCRKATVPTVNSNRTI 73
E C N+ S +W Y +LEGS+ W L Y K ++R +
Sbjct: 124 ECCTKANLPSEITVASWEIYYHAVQRVSLEGSEAAWQLSAIYYYLLSKGIKRRGKASRLL 183
Query: 74 EGNL-VCLTSLLKHCKMSLNQFLNKCRKWADM---RKLPDSFRSKIARLERNFAVSKVIF 129
+ + ++ +S+ + ++K ++A++ RK+ + I RL+ AV+ VIF
Sbjct: 184 TQPFPISILTIANTFDVSVAELIDKTTRFAEIIHSRKM-RRYLEYIRRLQEGLAVTCVIF 242
Query: 130 TKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHC-TSTKVFEFTWILFVLTKAEYLDVSND 188
K+ +F +F E + HN C +S ++F W F++ K+ ++D
Sbjct: 243 KKFCRVFNGIF------EEVKESTHN------CPSSYELFTILWTYFLVMKSRL--PTDD 288
Query: 189 LVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPC-IISILCK 247
L+N++ LL + D +Y + S L+D G+ + L D C I+ LC
Sbjct: 289 LINNYQLLFSMIDHLYTEM--SSLQD-------GIVYHLNQEFVGNLIDKDCTILRALCT 339
Query: 248 HHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
+ G VLD+ + ++ +K ++ +G
Sbjct: 340 NFGGS--------------------------VLDTRHFYQHT--YKKMDKTGLPTSWDFA 371
Query: 308 KLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFLPKFQSF 358
+ R I Y Y+L G DER+F+P + F
Sbjct: 372 EFRDEI---------------LNAPKDAYVSYLLQRGSIDERVFIPSPEDF 407
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNI 295
+++ E LSR +V+H + EE V++ AW S+SPLW+ +
Sbjct: 636 LMISHEKRLSRQMVQHFSRIEENVIEYYAWKSDSPLWQMV 675
>gi|159155246|gb|AAI54731.1| Rb1 protein [Danio rerio]
Length = 903
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 87/188 (46%), Gaps = 26/188 (13%)
Query: 73 IEGNLVCLTSLLKHCKMSLNQFLNKCRKW-ADMRKLPDSFRSKIARLERNFAVSKVIFTK 131
+EG + T LK +S+ QF++ RK ++ + S + RLE + V+ ++ +
Sbjct: 97 LEGINLTFTQFLKAVGLSVKQFISLVRKMDVNVDTISPKVNSAVTRLENKYDVTLALYQR 156
Query: 132 YLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVN 191
++ +++F PD N K+ +++E +W +F+L K +L + +DLV
Sbjct: 157 FVKTCEKIFAEPD----------NAKR------KELWESSWTMFLLAKGTFLQMEDDLVI 200
Query: 192 SFHLLIATCDL----IYANVIQSKLRDIVNPDFEGMPS-----NFLDSHFAPLDDPPCII 242
SF LL+ + + +++QS + +V+ P+ N S P + ++
Sbjct: 201 SFQLLLCVLEFFAKRLSPSLLQSPYKSVVSSSTLSPPTRTSRRNQGKSKPRPAEMDMQLL 260
Query: 243 SILCKHHD 250
LCK D
Sbjct: 261 ETLCKEGD 268
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPG 304
++AE +L D+VKHL +++SLAW ++SPL+ ++ S +E PG
Sbjct: 532 IKAEPTLKHDMVKHLEQCGHVIMESLAWRTDSPLFDLLKQSREEGPG 578
>gi|341879504|gb|EGT35439.1| hypothetical protein CAEBREN_30365, partial [Caenorhabditis
brenneri]
Length = 828
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 138/346 (39%), Gaps = 78/346 (22%)
Query: 22 IDSTTAKEAWNAYKEMSHHYTLEGSQLHW-LGCSLYVSCRKATVPTVNSNRTIEGNL-VC 79
+ + A +W Y + +LEGS+ W L Y K + R + V
Sbjct: 68 VPADIAIASWELYYHAAERVSLEGSEKAWQLSAIYYYLLTKGIKRRGKTGRLLTQPFPVS 127
Query: 80 LTSLLKHCKMSLNQFLNKCRKWAD------MRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
+ ++ +S+ + ++K ++ + MR+ + FR R++ AVS VIF K+
Sbjct: 128 ILTVANSFDISVAELIDKTVRFGEIIHSRKMRRFLEYFR----RVQEGLAVSCVIFKKFC 183
Query: 134 PMFKEMFKPPDLDELLMHVRHNKKKMIHC-TSTKVFEFTWILFVLTKAEYLDVSNDLVNS 192
+++E+F K+ C +S +F W F++ K+ ++DLVN+
Sbjct: 184 KIYRELFG------------QVKEGSDSCPSSYDLFTILWTSFLVMKSRL--PTDDLVNN 229
Query: 193 FHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGC 252
+ LL + D +Y ++ K IV+ + +F+ S + I+ LC GC
Sbjct: 230 YQLLFSMLDHLYTDMCSMK-DGIVH----HLNQDFVQSLIST---DTTIVRALCGKFGGC 281
Query: 253 KLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGN 312
VLD+ + + ++K +E +G IP +
Sbjct: 282 --------------------------VLDTRHFQDH--IYKKMEKTG--IPSTWDFV--- 308
Query: 313 IEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFLPKFQSF 358
E D Y++Y+L G DERIF+P+ ++F
Sbjct: 309 ----------EFSDLIINTPKTTYDQYLLQRGGIDERIFIPQPENF 344
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLW 292
+++ E LSR +V+H + EE+V++ AW +SPLW
Sbjct: 573 LMITHEKRLSRQMVRHFSRIEEKVVECFAWKCDSPLW 609
>gi|118150572|ref|NP_001071248.1| retinoblastoma-associated protein [Danio rerio]
gi|116487813|gb|AAI25967.1| Retinoblastoma 1 [Danio rerio]
Length = 903
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 86/188 (45%), Gaps = 26/188 (13%)
Query: 73 IEGNLVCLTSLLKHCKMSLNQFLNKCRKW-ADMRKLPDSFRSKIARLERNFAVSKVIFTK 131
+EG + T LK +S+ QF++ RK ++ + S + RLE + V+ ++ +
Sbjct: 97 LEGINLTFTQFLKAVGLSVKQFISLVRKMDVNVDTISPKVNSAVTRLENKYDVTLALYQR 156
Query: 132 YLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVN 191
++ +++F PD N K+ +++E +W +F+L K +L + +DLV
Sbjct: 157 FVKTCEKIFAEPD----------NAKR------KELWESSWTMFLLAKGTFLQMEDDLVI 200
Query: 192 SFHLLIATCDL----IYANVIQSKLRDIVNPDFEGMPS-----NFLDSHFAPLDDPPCII 242
SF LL+ + + +++QS +V+ P+ N S P + ++
Sbjct: 201 SFQLLLCVLEFFAKRLSPSLLQSPYNSVVSSSTLSPPTRTSRRNQGKSKPRPAEMDMQLL 260
Query: 243 SILCKHHD 250
LCK D
Sbjct: 261 ETLCKEGD 268
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 33/47 (70%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPG 304
++AE +L D+VKHL E +++SLAW ++SPL+ ++ S +E PG
Sbjct: 532 IKAEPTLKHDMVKHLEQCEHVIMESLAWRTDSPLFDLLKQSREEGPG 578
>gi|402579712|gb|EJW73663.1| hypothetical protein WUBG_15426, partial [Wuchereria bancrofti]
Length = 209
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%)
Query: 256 VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCE 306
+I+RA++SLSR++VKHLN EE+VL+ AW +SPLW ++ +P +
Sbjct: 119 LIIRADSSLSREMVKHLNKVEERVLEEFAWSLDSPLWPSLHRRTDGVPSSQ 169
>gi|410915598|ref|XP_003971274.1| PREDICTED: retinoblastoma-associated protein-like [Takifugu
rubripes]
Length = 913
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 82/189 (43%), Gaps = 29/189 (15%)
Query: 16 LCMALNIDSTTAKEAWNAYKEMSHHYT-LEGSQLHWLGCSLYVSCRKATVPTVNSNRTIE 74
LC +L++ AW +K + LE SQ SL+ SC ATV +++
Sbjct: 48 LCKSLHVTDLVCDHAWTLWKTIQDSVEELEDSQK-----SLWGSCLFATVTDMDTAS--- 99
Query: 75 GNLVCLTSLLKHCKMSLNQFLNKCRKW-ADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
LT LLK +++ QFL RK ++ + S ++ LE+ + V ++ ++
Sbjct: 100 ---FTLTQLLKAVSLNVKQFLALVRKMDVNLDTISTKVNSALSHLEKKYDVMLALYQRFE 156
Query: 134 PMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSF 193
K +F V NK+K + W +F+L K L + +DLV SF
Sbjct: 157 KTCKSVF---------ASVSENKEK-------ETIRTCWTMFLLAKGRALQMEDDLVISF 200
Query: 194 HLLIATCDL 202
LL+ T +
Sbjct: 201 QLLLCTLEF 209
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 26/35 (74%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLW 292
++A+ +LS+DIVKHL E +++ +AW + SPL+
Sbjct: 528 IKADPTLSKDIVKHLETCENLIMERIAWRTGSPLF 562
>gi|348583|pir||A44879 retinoblastoma protein - clawed frog
gi|255082|gb|AAB23173.1| retinoblastoma protein, pXRb1 [Xenopus, Peptide, 899 aa]
Length = 899
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 93/218 (42%), Gaps = 33/218 (15%)
Query: 16 LCMALNIDSTTAKEAWNAYKEM--SHHYTLE-GSQLHWLGCSLYVS---CRKATVPTVNS 69
LC L I +AWN Y++M S + E + LG LY++ C + T
Sbjct: 33 LCENLKISDNVRGKAWNTYEKMFPSGYMMRETAKKKESLGLCLYIASVDCEEMTF----- 87
Query: 70 NRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKW-ADMRKLPDSFRSKIARLERNFAVSKVI 128
T LLK ++S+N+ R+ +M L + + I++L++ + ++
Sbjct: 88 ---------TFTELLKILRLSVNRCFRLLREMDINMDVLSNKVDNAISKLKKKYENMCLL 138
Query: 129 FTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSND 188
F K+ F EL+ +HN + + + + + TWI F+L + + L + ++
Sbjct: 139 FQKFQRTF----------ELIFEEQHNTRAAVD--TAPILKGTWITFLLARGKILQMDDE 186
Query: 189 LVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSN 226
LV S LL+ D S L++ G+P N
Sbjct: 187 LVISSQLLLCVLDYFIKLSPPSILKEPYKSALNGLPVN 224
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 78/171 (45%), Gaps = 21/171 (12%)
Query: 135 MFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSN--DLVNS 192
+FKE F + + + + + K+ C +V E + T+ E L V N L+N+
Sbjct: 400 VFKEKFAS-SVGQACAEIGYQRYKLGVCLYYRVME----AILKTEEERLSVHNFSKLLNN 454
Query: 193 --FHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHD 250
FH+ + C + ++V + S S L P + + K D
Sbjct: 455 DIFHICLLACAV-----------EVVVASYARNASQAYCSSGTNLSFPWILRAFEIKAFD 503
Query: 251 GCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQ 300
K+ ++AE SL+ +++K+L E Q+++ LAW S+SPL+ I+ + +
Sbjct: 504 FYKVIECFIKAEPSLTSNMIKYLERCEHQIMECLAWQSDSPLFDLIKQTRE 554
>gi|46095209|gb|AAS80140.1| retinoblastoma tumor suppressor [Fundulus heteroclitus]
Length = 913
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 146/378 (38%), Gaps = 80/378 (21%)
Query: 16 LCMALNIDSTTAKEAWNAYKEMSHHY-TLEGSQLH-WLGCSLYVSCRKATVPTVNSNRTI 73
LC +L++ AW ++ + GSQ W C L+V+ V
Sbjct: 49 LCKSLHVSDLLCDRAWLLWRTVQESMDKAPGSQERLWAAC-LFVTVTDMDV--------- 98
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKW-ADMRKLPDSFRSKIARLERNFAVSKVIFTKY 132
+T +LK +++L QFL+ R+ ++ + S++ RLE+ + V ++ ++
Sbjct: 99 --GCFTVTQVLKAVRLNLKQFLDVVRQLDVNLDTITTKVNSRLTRLEKKYDVMLALYQRF 156
Query: 133 LPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNS 192
K +F +L ++ M C W +F+L K L + +DLV S
Sbjct: 157 EKTCKSIF-------VLTPDGRERETMRTC---------WTMFLLAKGRALQMEDDLVIS 200
Query: 193 FHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGC 252
F LL+ T +LI I+ D + P ++ S + PP S +
Sbjct: 201 FQLLLCTLELI----IKRCSPDQLQPLYQ--------SAVTKVQSPPTRTSRRSQSKAKS 248
Query: 253 KLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGN 312
+ AE + +++ L E ++ + V N+ ++
Sbjct: 249 R-----PAEPEVDARLLETLCKDNECNIEEVKNVYNTSFLAFLDSM-------------- 289
Query: 313 IEDLS-AILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL--------PKFQ-SFDETA 362
DLS A P+ D +N++YEE+ L D D R+F PK Q S E
Sbjct: 290 --DLSRAAGVPQAKD-----INRLYEEHYLKSRDVDGRLFFDGDESVLPPKVQISQVERT 342
Query: 363 PGSSGPGLDD-LSPAPAP 379
P + P D + P P P
Sbjct: 343 PKKNQPDEDGPMIPPPTP 360
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 29/39 (74%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
++AE +LS+DI+KHL E +++ +AW + SPL++ ++
Sbjct: 525 IKAEPTLSKDIIKHLETCENLIMERIAWRTGSPLFELLQ 563
>gi|390351820|ref|XP_790323.3| PREDICTED: retinoblastoma-associated protein-like
[Strongylocentrotus purpuratus]
Length = 797
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 78/173 (45%), Gaps = 12/173 (6%)
Query: 50 WLGCSLYVSCRKAT----VPTVNSNRTIEGN-LVCLTSLLKHCKMSLNQFLNKCRKWADM 104
W C++Y++ P + + E + L ++ LL+ +++ F K ++
Sbjct: 46 WAVCAIYIATVNVKYGKGAPVSSGHEAPESSSLPTVSHLLRASNINIKTFFEHMGKVEEI 105
Query: 105 RKLPDSFRSKIARLERNFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTS 164
D+ +S + L++ + ++ IF K+ +F ++FK PD + + + C
Sbjct: 106 FSFSDTVKSSLMALKQKYLITYAIFCKFEKLFSKLFKSPD----EIPCSTDGSCDVSCDK 161
Query: 165 TKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCDLIYANVIQSKLRDIVN 217
KV W+LF++ K L ++LV HL+++ D + +R+ V+
Sbjct: 162 RKV---CWLLFLIAKGSMLSECSELVLPLHLMLSCVDYTLRRALPFTVRETVS 211
>gi|89886547|gb|ABD78137.1| retinoblastoma susceptibility protein [Xiphophorus maculatus]
Length = 912
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 90/218 (41%), Gaps = 32/218 (14%)
Query: 3 QLADNETAHQHQE---LCMALNIDSTTAKEAWNAYKEMSHHY-TLEGSQLHWLGCSLYVS 58
+L++ + +H E LC +L++ AW ++ + + GSQ G L+V
Sbjct: 33 ELSEKKHREKHAEFVSLCKSLHVSDLVCDRAWTLWESVRESMDKVPGSQQRLWGACLFVI 92
Query: 59 CRKATVPTVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKW-ADMRKLPDSFRSKIAR 117
++ +T +LK ++L QFL R+ ++ + S + R
Sbjct: 93 ITD-----------MDTGSFTVTQVLKAVSLNLKQFLALVRQLDVNLDTISMKVNSALTR 141
Query: 118 LERNFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVL 177
LE+ + V ++ ++ K +F +L ++ M C W +F+L
Sbjct: 142 LEKKYDVMLALYQRFEKTCKNIF-------VLTSDGRERETMRTC---------WTMFLL 185
Query: 178 TKAEYLDVSNDLVNSFHLLIATCDLIYANVIQSKLRDI 215
K L + +DLV SF LL+ T +L +L+ +
Sbjct: 186 AKGRALQMEDDLVISFQLLLCTLELFIKRCSSDQLQSL 223
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 27/36 (75%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWK 293
++AE +LS+DI+KHL E +++ +AW + SPL++
Sbjct: 525 IKAEPTLSKDIIKHLETCENLIMERIAWRTGSPLFE 560
>gi|328865754|gb|EGG14140.1| Rb-like protein [Dictyostelium fasciculatum]
Length = 1054
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 35/217 (16%)
Query: 3 QLADNETAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLEGS-QLHWLGCSLYVSCR- 60
QL+ + Q+ LNID T+ AW +++ + S Q H++ CSL+V+
Sbjct: 30 QLSLEILKEKFQDFISTLNIDQDTSATAWALIEDLKLSSDINASDQKHYIACSLFVAGNI 89
Query: 61 KATV--------PTVNSNRTIEGNLVCLTSLLKHCKMSLNQF----LNKCRKWADMRKLP 108
K V P +S N V L+ LLK + L +F L + W + K
Sbjct: 90 KFNVLLKNYYRNPKDSSTPKQSFNSVYLSQLLKLTNIKLKEFFEVPLPRFIAWMGLGK-- 147
Query: 109 DSFRSKIARLERNFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVF 168
+ + LE++F + +++ KY +L LL H + K ++
Sbjct: 148 -AVEEQFKNLEQSFVIMNILYRKY----------EELYSLLFHFDSKEPK-------ELL 189
Query: 169 EFTWILFVLTKAE-YLDVSNDLVNSFHLLIATCDLIY 204
W +++ K+ +++ DL+ S +LL+ + D IY
Sbjct: 190 AIGWFIYLYCKSRLFVNQVPDLMKSINLLLCSLDFIY 226
>gi|13346592|gb|AAG21826.1| retinoblastoma [Oryzias latipes]
Length = 910
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 135/340 (39%), Gaps = 71/340 (20%)
Query: 16 LCMALNIDSTTAKEAWNAYKEMSH-HYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTIE 74
LC +L+ + + AW+ +K + ++ +Q G L+V+ ++
Sbjct: 48 LCKSLHATDSVCERAWSLWKTVQDVMEDVDANQKRLWGSCLFVTATD-----------MD 96
Query: 75 GNLVCLTSLLKHCKMSLNQFLNKCRKW-ADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
LT +LK +++ QF++ R+ ++ + S + R+E+ + V ++ ++
Sbjct: 97 ATCFTLTEVLKAVNINVKQFVDLVRQLDVNLDTISTKVNSALMRVEKKYDVMLALYQRFE 156
Query: 134 PMFKEMF-KPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNS 192
K++F PD E + M C W +F+L K L + +DLV S
Sbjct: 157 KTCKKIFASTPDKKE--------RATMRTC---------WTMFLLAKGRALQMEDDLVIS 199
Query: 193 FHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGC 252
F LL+ T +L P L P S++ K
Sbjct: 200 FQLLLCTLELFIK---------------RSSPELLL----------PLYKSVVSKAQSPT 234
Query: 253 KLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGN 312
+ +++A SR + +N+ ++L++L K+ E + +E+ Q
Sbjct: 235 RTSRRNQSKAK-SRVVESEVNV---ELLETLC--------KDNECNAEEVKNVYQTSLSA 282
Query: 313 IEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
DL + P D+ V+K Y+E+ L GD D R+F
Sbjct: 283 FLDLMDLPIP---DFLGTDVSKQYQEHYLKSGDIDGRLFF 319
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 27/36 (75%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWK 293
++AE +LS+DI+KHL E +++ +AW + SPL++
Sbjct: 524 IKAEPTLSKDIIKHLETCENLIMEKIAWRTGSPLFE 559
>gi|432898486|ref|XP_004076525.1| PREDICTED: retinoblastoma-associated protein isoform 1 [Oryzias
latipes]
Length = 916
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 69/341 (20%), Positives = 136/341 (39%), Gaps = 70/341 (20%)
Query: 16 LCMALNIDSTTAKEAWNAYKEMSH-HYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTIE 74
LC +L+ + + AW +K + ++ +Q G L+V+ ++
Sbjct: 48 LCKSLHATDSVCERAWTLWKTVQDVMEDVDANQKRLWGSCLFVTATD-----------MD 96
Query: 75 GNLVCLTSLLKHCKMSLNQFLNKCRKW-ADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
LT +LK +++ QF+ RK ++ + S + R+E+ + V ++ ++
Sbjct: 97 AACFTLTEVLKAVNINVKQFVGLVRKLDVNLDTISTKVNSALMRVEKKYDVMLALYQRFE 156
Query: 134 PMFKEMF-KPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNS 192
K++F PD E + M C W +F+L K L + +DLV S
Sbjct: 157 KTCKKIFASTPDKKE--------RATMRTC---------WTMFLLAKGRALQMEDDLVIS 199
Query: 193 FHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGC 252
F LL+ T +L I+ +++ P ++
Sbjct: 200 FQLLLCTLELF----IKRSSPELLLPLYKS------------------------------ 225
Query: 253 KLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVS-NSPLWKNIEDSGQEIPGCEQKLRG 311
V+ +A++ L+R ++ + + +V++S V L K+ E + +E+ Q
Sbjct: 226 ---VVSKAQSPLTRTSRRNQSKAKSRVVESEVNVELLETLCKDNECNAEEVKNVYQTSFS 282
Query: 312 NIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
DL + +F V++ Y+E+ L GD D R+F
Sbjct: 283 AFLDLMDLSRFPDFPL-VTDVSEQYQEHYLKSGDIDGRLFF 322
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 27/36 (75%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWK 293
++AE +LS+DI+KHL E +++ +AW + SPL++
Sbjct: 529 IKAEPTLSKDIIKHLETCENLIMEKIAWRTGSPLFE 564
>gi|241573931|ref|XP_002403233.1| tumor suppressor p130, putative [Ixodes scapularis]
gi|215500199|gb|EEC09693.1| tumor suppressor p130, putative [Ixodes scapularis]
Length = 574
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 7/140 (5%)
Query: 99 RKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKK 158
+KWADM L + R +I +E++F V+ I+ KY+ +F +FK P + E + K+
Sbjct: 2 KKWADMANLNERMRRRIETIEKSFCVTAKIYEKYVGIFAAVFKEPQV-EAPRRLTKGAKR 60
Query: 159 MIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNP 218
+H K T+ VL + E LD L + H I T +A+ +Q R++ P
Sbjct: 61 RVHRQVWKNLNKTYEEHVLKEGE-LDERIFLASDAHERIGT-PRHFADSVQ---RELHRP 115
Query: 219 DFEGMPSNFLDSHFAPLDDP 238
G+ NF PL P
Sbjct: 116 RMPGI-VNFQKLEVQPLLTP 134
>gi|432898488|ref|XP_004076526.1| PREDICTED: retinoblastoma-associated protein isoform 2 [Oryzias
latipes]
Length = 921
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/345 (20%), Positives = 136/345 (39%), Gaps = 73/345 (21%)
Query: 16 LCMALNIDSTTAKEAWNAYKEMSH-HYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTIE 74
LC +L+ + + AW +K + ++ +Q G L+V+ ++
Sbjct: 48 LCKSLHATDSVCERAWTLWKTVQDVMEDVDANQKRLWGSCLFVTATD-----------MD 96
Query: 75 GNLVCLTSLLKHCKMSLNQFLNKCRKW-ADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
LT +LK +++ QF+ RK ++ + S + R+E+ + V ++ ++
Sbjct: 97 AACFTLTEVLKAVNINVKQFVGLVRKLDVNLDTISTKVNSALMRVEKKYDVMLALYQRFE 156
Query: 134 PMFKEMF-KPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNS 192
K++F PD E + M C W +F+L K L + +DLV S
Sbjct: 157 KTCKKIFASTPDKKE--------RATMRTC---------WTMFLLAKGRALQMEDDLVIS 199
Query: 193 FHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHDGC 252
F LL+ T +L I+ +++ P ++
Sbjct: 200 FQLLLCTLELF----IKRSSPELLLPLYKS------------------------------ 225
Query: 253 KLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVS-NSPLWKNIEDSGQEIPGCEQKLRG 311
V+ +A++ L+R ++ + + +V++S V L K+ E + +E+ Q
Sbjct: 226 ---VVSKAQSPLTRTSRRNQSKAKSRVVESEVNVELLETLCKDNECNAEEVKNVYQTSFS 282
Query: 312 NIEDLSAILEPENFDYN----FKVVNKMYEEYILSVGDFDERIFL 352
DL + +F V++ Y+E+ L GD D R+F
Sbjct: 283 AFLDLMDLSRFPDFPLQGIPPVTDVSEQYQEHYLKSGDIDGRLFF 327
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 27/36 (75%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWK 293
++AE +LS+DI+KHL E +++ +AW + SPL++
Sbjct: 534 IKAEPTLSKDIIKHLETCENLIMEKIAWRTGSPLFE 569
>gi|343960572|dbj|BAK64057.1| retinoblastoma-related protein;3 [Physcomitrella patens subsp.
patens]
Length = 1068
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 76/369 (20%), Positives = 149/369 (40%), Gaps = 68/369 (18%)
Query: 14 QELC-MALNIDSTTAKEAWNAYKEMS----------HHYTLEGSQLHWLGCSLYVSCRKA 62
+E C + L +D T ++A +KE T+E ++ W GC LYV +
Sbjct: 97 REHCEVGLCLDDPTLQQALRLFKESKPLLLANIDSIGTSTVEDTERLWGGCVLYVVKALS 156
Query: 63 TVPTVNSNRTIEGNLV--CLTSLLKHCKMSLNQFLNKCRKW--------ADMRKLPDSFR 112
TV+ +++ E N V L+ L++ K+S+ +F + + M R
Sbjct: 157 CGATVDGDKS-ESNAVGFTLSQLMRQTKISVIEFFKELPHFLVKVGPIVKQMYGDEWEKR 215
Query: 113 SKIARLERNFAVSKVIFTKYLPMFKEMFKPPD-----LDELLMHVRHNKKKMIHCTSTKV 167
++ ++ NF +FT + ++++ F PD + L VR +H
Sbjct: 216 LQVKEVQANFVHLTALFTYFKRVYQDFFLSPDTFTNIVSRSLSGVRDEHHVSVH------ 269
Query: 168 FEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNF 227
+F W+LF+ + + +DLV + L+A ++ + + LR D P F
Sbjct: 270 MQFGWMLFLALRMHVIQQFSDLVTCTNALMAVMVILILH-MPPDLRKFSLQD----PVRF 324
Query: 228 LDSHFAPLDDPPCIISILCKHH---DGCKLCVIVRAEASLSRDIVKHL-NLTEEQVLDSL 283
+D +++ LC + D ++ +A A++S+ K + L Q L+
Sbjct: 325 AKRSSEGVD----LVASLCATYYAADEDVSSLLEKANATISKLFGKPMKGLHGSQTLEHF 380
Query: 284 AWVSNSPLWKNIEDSGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSV 343
++ G + L +++ ++ N +++ K YE+ S
Sbjct: 381 LGINP----------------------GGLAYLEGLMDKKSLAANLRMLEKDYEDSYQSR 418
Query: 344 GDFDERIFL 352
G DER+F+
Sbjct: 419 GGLDERMFI 427
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 27/38 (71%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNI 295
VR E +L R++ +HLN EE++L+S+AW S ++ ++
Sbjct: 656 VRHEETLPRELKRHLNTIEERILESMAWEKGSSMYNSL 693
>gi|291190170|ref|NP_001167086.1| Retinoblastoma-associated protein [Salmo salar]
gi|223648042|gb|ACN10779.1| Retinoblastoma-associated protein [Salmo salar]
Length = 910
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 77/197 (39%), Gaps = 38/197 (19%)
Query: 11 HQHQE-------LCMALNIDSTTAKEAWNAYK--EMSHHYTLEGSQLHWLGCSLYVSCRK 61
+HQE LC +L + AW +K + S L+ + W C L+V+
Sbjct: 35 EKHQEKDADFMTLCQSLQVTDAVCDRAWTIWKAVQASVDKVLDTQKRLWAAC-LFVAVID 93
Query: 62 ATVPTVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKW-ADMRKLPDSFRSKIARLER 120
V + T +LK +++ QFL +K ++ + S + RLE+
Sbjct: 94 LEVASFT-----------FTQILKAVDLNVKQFLGLLKKMDVNLDTISTKVNSAVTRLEK 142
Query: 121 NFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKA 180
+ VS+ ++ ++ ++ ++ W +F+L K
Sbjct: 143 KYDVSRALYQRFEKTCSTIYAEDS----------------EAKGKEILRSCWTMFLLAKG 186
Query: 181 EYLDVSNDLVNSFHLLI 197
L + +DLV SFHL++
Sbjct: 187 RALQMEDDLVISFHLMV 203
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 34/46 (73%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIP 303
++AE SLS+D+VKHL E +++++AW +SPL++ ++ + +E P
Sbjct: 526 IKAEPSLSKDMVKHLERCEHLIMETIAWREDSPLFELLKRTREEGP 571
>gi|327261143|ref|XP_003215391.1| PREDICTED: retinoblastoma-associated protein-like [Anolis
carolinensis]
Length = 901
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 11/112 (9%)
Query: 191 NSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISIL-CKHH 249
N+FH + C L + D M +N P II+IL K
Sbjct: 453 NTFHASLLACALEVVVATYGTSTNASQGDAMNMETNL---------SFPWIINILDLKAF 503
Query: 250 DGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQ 300
D K+ ++AE SL+R+++KHL E Q+++SLAW S+SPL++ I+ S +
Sbjct: 504 DLYKVIESFIKAEPSLTREMIKHLECCEHQIMESLAWQSDSPLFELIKQSKE 555
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 80/187 (42%), Gaps = 22/187 (11%)
Query: 16 LCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKATVPTVNSNRTIEG 75
LC + AW A+++M + +EG + G ++++ +E
Sbjct: 32 LCDVFQVSDNVRVTAWEAFEKMPVNGIVEGHRKVLWGICIFIAAVD-----------LEE 80
Query: 76 NLVCLTSLLKHCKMSLNQFLNKCRKW-ADMRKLPDSFRSKIARLERNFAVSKVIFTKYLP 134
T LLK +S+ +F+ ++ +M + S ++RL++ + V ++ K+
Sbjct: 81 MTFTFTDLLKCLNISVCKFVYLIKEIDVNMDTISTKVDSAVSRLKKKYDVLLALYQKF-- 138
Query: 135 MFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFH 194
EL+ + N + S + + WI+F+L K + L + +DLV SF
Sbjct: 139 --------ERTCELIYIDQPNDQTCAELNSPLILKLCWIMFLLAKGKILQMEDDLVISFQ 190
Query: 195 LLIATCD 201
LL+ T D
Sbjct: 191 LLLCTLD 197
>gi|343960570|dbj|BAK64056.1| retinoblastoma-related protein;2 [Physcomitrella patens subsp.
patens]
Length = 1071
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 150/372 (40%), Gaps = 74/372 (19%)
Query: 14 QELC-MALNIDSTTAKEAWNAYKEMSH----------HYTLEGSQLHWLGCSLYVSCRKA 62
+E C + L +D T+KEA + +KE T+E ++ W C LYV
Sbjct: 97 REYCEVGLCLDLQTSKEAMHLFKESKSLLIANADSLGTGTVEETERLWGACVLYVVKAFR 156
Query: 63 TVPTVNSNRTIEGNLV--CLTSLLKHCKMSLNQFLNKCRKWADMRKLP-------DSF-- 111
V +++ E N V L+ L++ K+S+ +F + + M+ P D +
Sbjct: 157 CGAAVGGDKS-ESNAVGFTLSQLMRLTKISVVEFFKELPHFL-MKVGPIVKQMYGDEWEK 214
Query: 112 RSKIARLERNFAVSKVIFTKYLPMFKEMFKPPD-----LDELLMHVRHNKKKMIHCTSTK 166
R ++ ++ NF +FT Y ++++ F PD + L V + IH
Sbjct: 215 RLQVKEVQANFVHLTALFTYYKRVYQDFFLSPDTFSNIVSRSLSGVTDDHHVSIH----- 269
Query: 167 VFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSN 226
+F W+LF+ + + +DLV + L+A ++ + + PD
Sbjct: 270 -MQFGWMLFLALRMHVIQQFSDLVTCTNALLAVMVILILH---------MPPDLRKF--- 316
Query: 227 FLDSHFAPLDDPPCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWV 286
L DP + + +G L + A + + V LNL E+
Sbjct: 317 -------SLQDP---VRFAKRSSEGIHLVASLCATYYAADEDV--LNLLEK--------- 355
Query: 287 SNSPLWKNIEDSGQEIPGCEQKLR------GNIEDLSAILEPENFDYNFKVVNKMYEEYI 340
+N+ + K S +++ G + G + L ++ ++ N +V+ K YE+
Sbjct: 356 ANATISKLFGKSMKDLHGLQTSEHFLGINLGGLSYLEGFMDNKSLASNLRVLEKDYEDAY 415
Query: 341 LSVGDFDERIFL 352
S G DER+F+
Sbjct: 416 QSRGGLDERMFI 427
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 27/38 (71%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNI 295
VR E +L R++ +HLN EE++L+S+AW S ++ ++
Sbjct: 657 VRHEDTLPRELKRHLNTIEERILESMAWGKGSSMYNSL 694
>gi|348538760|ref|XP_003456858.1| PREDICTED: retinoblastoma-associated protein-like [Oreochromis
niloticus]
Length = 912
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 80/190 (42%), Gaps = 29/190 (15%)
Query: 16 LCMALNIDSTTAKEAWNAYKEMSHHY-TLEGSQLHWLGCSLYVSCRKATVPTVNSNRTIE 74
LC +L++ AW +K + SQ G L+V+ ++
Sbjct: 48 LCKSLHVTDPVCDRAWTLWKTVQESVDEAADSQKKLWGACLFVTVTD-----------MD 96
Query: 75 GNLVCLTSLLKHCKMSLNQFLNKCRKW-ADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
LT +LK +++ QF++ RK ++ + S ++RL++ + V ++ ++
Sbjct: 97 ATCFTLTQVLKAVCLNVKQFIDLVRKLDVNLDTISTKVNSALSRLDKKYDVMLALYQRFE 156
Query: 134 PMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSF 193
K++F L ++ + C W +F+L K L + +DLV SF
Sbjct: 157 KTCKKIFN-------LTSDGKERETVRTC---------WTMFLLAKGRALQMEDDLVISF 200
Query: 194 HLLIATCDLI 203
LL+ T +LI
Sbjct: 201 QLLLCTLELI 210
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
++A+ +LS++IVKHL E +++ LAW + SPL++ ++ E G EQ
Sbjct: 529 IKADPTLSKEIVKHLETCENLIMERLAWRTGSPLFELLKQE-HESGGAEQ 577
>gi|431902377|gb|ELK08878.1| Retinoblastoma-associated protein [Pteropus alecto]
Length = 925
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 31/35 (88%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLW 292
++AEA+L+RD++KHL E ++++SLAW+SNSPL+
Sbjct: 533 IKAEANLTRDMIKHLERCEHRIMESLAWLSNSPLF 567
>gi|444732064|gb|ELW72387.1| Retinoblastoma-associated protein, partial [Tupaia chinensis]
Length = 754
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 239 PCIISIL-CKHHDGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P I+++L K D K+ ++AEA+L+RD++KHL E ++++SLAW+S+SPL+ I+
Sbjct: 341 PWILNVLNLKAFDFYKVIESFIKAEANLTRDMIKHLERCEHRIMESLAWLSDSPLFDLIK 400
Query: 297 DS 298
S
Sbjct: 401 QS 402
>gi|149635912|ref|XP_001514098.1| PREDICTED: retinoblastoma-associated protein [Ornithorhynchus
anatinus]
Length = 917
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 45/66 (68%), Gaps = 2/66 (3%)
Query: 237 DPPCIISIL-CKHHDGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKN 294
D P I+++L K D K+ ++AEASL+R+++KHL E ++++SLAW S+SPL+
Sbjct: 502 DFPWILNVLDLKAFDFYKVIESFIKAEASLTREMIKHLERCEHRIMESLAWQSDSPLFDL 561
Query: 295 IEDSGQ 300
I+ S +
Sbjct: 562 IKQSKE 567
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 97/251 (38%), Gaps = 43/251 (17%)
Query: 16 LCMALNIDSTTAKEAWNAYKEMSH-----HYTLEGSQLHWLGCSLYVSCRKATVPTVNSN 70
LC L + + K AW+ ++++S Y + +L W C +
Sbjct: 46 LCQKLKVPADVRKGAWDTWRKVSSMDGMLDYIQKKKEL-WGICIFTAAV----------- 93
Query: 71 RTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFT 130
++ T L K +S+ +F ++ K+ S ++RL + + V ++
Sbjct: 94 -DLDEMTFTFTELQKSIDVSMYKFFQLLKEIDTSTKVD----STVSRLMKKYDVLFALYN 148
Query: 131 KYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLV 190
K + L+ + + + S V + +WI F+L K E L + +DLV
Sbjct: 149 KL----------ERICGLIYMAQPSSQVATEINSGLVLKVSWITFLLAKGEVLQMEDDLV 198
Query: 191 NSFHLLIATCD----LIYANVIQSKLRDIVNP-DFEGMP--SNFLDSHFAPLDDPP---- 239
SF L++ D L V++ R+ V G P S + A + P
Sbjct: 199 ISFQLMLCVLDYFIKLSPPAVLKEPYRNAVTAIPINGSPRTSRRGQNRSARVAKQPEHDT 258
Query: 240 CIISILCKHHD 250
+I +LCK HD
Sbjct: 259 RVIEVLCKEHD 269
>gi|196012646|ref|XP_002116185.1| hypothetical protein TRIADDRAFT_60210 [Trichoplax adhaerens]
gi|190581140|gb|EDV21218.1| hypothetical protein TRIADDRAFT_60210 [Trichoplax adhaerens]
Length = 820
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 239 PCIISIL--CKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P I+ IL +H G + +R+E SL ++V+HLN E +L+SLAW ++SPL+ +E
Sbjct: 466 PWILDILDIKAYHFGKVIESFIRSELSLDNNLVQHLNFIESMILESLAWQASSPLYAALE 525
Query: 297 DSGQEIPGCEQKLRGNIEDLSAILE 321
S ++ + E ++LE
Sbjct: 526 SSKIDLRYRQLVTENKTEVAGSLLE 550
>gi|351705118|gb|EHB08037.1| Retinoblastoma-associated protein, partial [Heterocephalus glaber]
Length = 883
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 14/116 (12%)
Query: 191 NSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHD 250
N FH+ + C L ++V + S LDS L P + + K D
Sbjct: 435 NVFHMSLLACAL-----------EVVMATYSRSTSQNLDSG-TDLSFPWILNVLNLKAFD 482
Query: 251 GCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSG-QEIPG 304
K+ ++AEA+L+R+++KHL E ++++SLAW+S+SPL+ I+ S QE P
Sbjct: 483 FYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQSKDQEGPA 538
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Query: 167 VFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCD----LIYANVIQSKLRDIVNPDFEG 222
V + +WI F+L K E L + +DLV SF L++ D L A +++ + V P G
Sbjct: 145 VLKVSWITFLLAKGEVLQMEDDLVISFQLMLCVLDYFIKLSPAALLKEPYKTAVIP-ING 203
Query: 223 MP------SNFLDSHFAPLDDPPCIISILCKHHD 250
P N L++ II +LCK H+
Sbjct: 204 SPRTPRRGQNRSARIAKQLENDTRIIEVLCKEHE 237
>gi|224043382|ref|XP_002198362.1| PREDICTED: retinoblastoma-associated protein [Taeniopygia guttata]
Length = 919
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 33/43 (76%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQ 300
+RAE SL+R+++KHL E ++++SLAW S SPL+ I++S +
Sbjct: 525 IRAEPSLTREMIKHLEHCEHRIMESLAWQSGSPLFDRIKESKE 567
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 97/260 (37%), Gaps = 49/260 (18%)
Query: 16 LCMALNIDSTTAKEAWNAYKEMSHHYTLEGS-------QLHWLGCSLYVSCRKATVPTVN 68
LC AL + + + AW Y+ +S +G+ + W C V+
Sbjct: 41 LCDALKVSESVRERAWKTYESLS---AADGALACNTKKKETWGVCIFIVAI--------- 88
Query: 69 SNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKW-ADMRKLPDSFRSKIARLERNFAVSKV 127
++ T LLK MS+ F ++ +M + S ++RL++ + V
Sbjct: 89 ---DLDEVTFTFTELLKSINMSVCTFFQFLKEVDVNMDTVSTKVDSTVSRLKKKYDVLFA 145
Query: 128 IFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSN 187
++ K+ ++ E+ + +S V + WI F+L K + L V +
Sbjct: 146 LYHKFERTCGLIYLEQPSSEISAEL----------SSILVLKNYWITFLLAKGKVLQVED 195
Query: 188 DLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAP------------- 234
DLV SF LL+ D + L++ + N S P
Sbjct: 196 DLVISFQLLLCVLDYFIKLSPPAMLKEPYKSSVSAVTVN--GSARTPRRGQNRSSRTAKQ 253
Query: 235 LDDPPCIISILCKHHDGCKL 254
LD II ILCK HD C L
Sbjct: 254 LDTDTKIIEILCKEHD-CNL 272
>gi|126327520|ref|XP_001368799.1| PREDICTED: retinoblastoma-associated protein [Monodelphis
domestica]
Length = 928
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Query: 239 PCIISIL-CKHHDGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P I+++L K D K+ ++AEASL+R+++KHL E ++++SLAW S+SPL+ I+
Sbjct: 514 PWILNVLDLKAFDFYKVIESFIKAEASLTREMIKHLERCEHRIMESLAWQSDSPLFDLIK 573
Query: 297 DSGQ 300
S +
Sbjct: 574 QSKE 577
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 79/191 (41%), Gaps = 31/191 (16%)
Query: 16 LCMALNIDSTTAKEAWNAYKEMSH-----HYTLEGSQLHWLGCSLYVSCRKATVPTVNSN 70
LC L + + KEAW ++++S Y ++ + W C + +P
Sbjct: 57 LCQKLKLPNRVRKEAWENWEKVSSMDGVLEYDIQKKKELWGICIFTAAIDLDEMP----- 111
Query: 71 RTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFT 130
T L K+ +S+++F + R+ K+ S ++RL + + V+F
Sbjct: 112 -------FTFTELQKNIDISVHKFYHLLREIDTSTKV----DSTVSRLMKKY---DVLFA 157
Query: 131 KYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLV 190
Y + + L+ + + S V + +WILF+L K E L + +DLV
Sbjct: 158 LYDKLERTC-------GLIYVAQPSSPISSEINSMLVLKVSWILFLLAKGEILQMEDDLV 210
Query: 191 NSFHLLIATCD 201
SF L++ D
Sbjct: 211 ISFQLMLCVLD 221
>gi|432104196|gb|ELK31018.1| Retinoblastoma-associated protein [Myotis davidii]
Length = 886
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Query: 239 PCIISIL-CKHHDGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P I+++L K D K+ ++AEA+L+R+++KHL E ++++SLAW+S+SPL+ I+
Sbjct: 473 PWILNVLNLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIK 532
Query: 297 DSG-QEIPG 304
+ +E PG
Sbjct: 533 QAKDREGPG 541
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 11/97 (11%)
Query: 164 STKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCD----LIYANVIQSKLRDIVNPD 219
S V + +WI F+L K E L + +DLV SF L++ D L ++Q + V P
Sbjct: 145 SVLVLKVSWITFLLAKGEILQMEDDLVISFQLMLCVLDYFIKLSPPALLQEPYKTAVIP- 203
Query: 220 FEGMP------SNFLDSHFAPLDDPPCIISILCKHHD 250
G P N L++ II +LCK H+
Sbjct: 204 INGSPRTPRRGQNRSARIAKQLENDTRIIEVLCKEHE 240
>gi|395521038|ref|XP_003764628.1| PREDICTED: retinoblastoma-associated protein [Sarcophilus harrisii]
Length = 919
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 34/43 (79%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQ 300
++AEASL+R+++KHL E ++++SLAW S+SPL+ I+ S +
Sbjct: 526 IKAEASLTREMIKHLERCEHRIMESLAWQSDSPLFDLIKQSKE 568
>gi|380804135|gb|AFE73943.1| retinoblastoma-like protein 1 isoform a, partial [Macaca mulatta]
Length = 239
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 26/33 (78%)
Query: 320 LEPENFDYNFKVVNKMYEEYILSVGDFDERIFL 352
L+ +F N K VNK YEEY+L+VGDFDERIFL
Sbjct: 1 LDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFL 33
>gi|387018056|gb|AFJ51146.1| Retinoblastoma-associated protein-like [Crotalus adamanteus]
Length = 916
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 33/41 (80%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDS 298
++AE SL+R+++KHL E ++++SLAW SNSPL++ I+ S
Sbjct: 526 IKAEPSLTREMIKHLEGCEHKIMESLAWQSNSPLFELIKQS 566
>gi|395848164|ref|XP_003796729.1| PREDICTED: retinoblastoma-associated protein [Otolemur garnettii]
Length = 927
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 239 PCIISIL-CKHHDGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P I+++L K D K+ ++AEA+L+R+++KHL E ++++SLAW+S+SPL+ I+
Sbjct: 514 PWILNVLNLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIK 573
Query: 297 DS 298
S
Sbjct: 574 QS 575
>gi|291408942|ref|XP_002720769.1| PREDICTED: retinoblastoma 1 [Oryctolagus cuniculus]
Length = 927
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 239 PCIISIL-CKHHDGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P I+++L K D K+ ++AEA+L+R+++KHL E ++++SLAW+S+SPL+ I+
Sbjct: 514 PWILNVLNLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIK 573
Query: 297 DS 298
S
Sbjct: 574 QS 575
>gi|344281690|ref|XP_003412611.1| PREDICTED: retinoblastoma-associated protein-like [Loxodonta
africana]
Length = 1003
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 239 PCIISIL-CKHHDGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P I+++L K D K+ ++AEA+L+R+++KHL E ++++SLAW+S+SPL+ I+
Sbjct: 590 PWILNVLNLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIK 649
Query: 297 DS 298
S
Sbjct: 650 QS 651
>gi|17942636|pdb|1GH6|B Chain B, Retinoblastoma Pocket Complexed With Sv40 Large T Antigen
Length = 333
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 13/109 (11%)
Query: 191 NSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHD 250
N FH+ + C L ++V + S LDS L P + + K D
Sbjct: 102 NIFHMSLLACAL-----------EVVMATYSRSTSQNLDSG-TDLSFPWILNVLNLKAFD 149
Query: 251 GCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDS 298
K+ ++AE +L+R+++KHL E ++++SLAW+S+SPL+ I+ S
Sbjct: 150 FYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQS 198
>gi|348500300|ref|XP_003437711.1| PREDICTED: retinoblastoma-like protein 2-like [Oreochromis
niloticus]
Length = 403
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 257 IVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
+ R + L +V HL EE+VL++LAW S+SPLW I + +P C+Q
Sbjct: 102 VWRVGSGLPHYVVTHLIQVEEKVLENLAWTSDSPLWDEITPNEGHMPTCQQ 152
>gi|28373873|pdb|1N4M|A Chain A, Structure Of Rb Tumor Suppressor Bound To The
Transactivation Domain Of E2f-2
gi|28373874|pdb|1N4M|B Chain B, Structure Of Rb Tumor Suppressor Bound To The
Transactivation Domain Of E2f-2
Length = 345
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 13/109 (11%)
Query: 191 NSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHD 250
N FH+ + C L ++V + S LDS L P + + K D
Sbjct: 101 NIFHMSLLACAL-----------EVVMATYSRSTSQNLDSG-TDLSFPWILNVLNLKAFD 148
Query: 251 GCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDS 298
K+ ++AE +L+R+++KHL E ++++SLAW+S+SPL+ I+ S
Sbjct: 149 FYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQS 197
>gi|330689525|pdb|3POM|A Chain A, Crystal Structure Of The Unliganded Retinoblastoma Protein
Pocket Domain
gi|330689526|pdb|3POM|B Chain B, Crystal Structure Of The Unliganded Retinoblastoma Protein
Pocket Domain
Length = 352
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 13/109 (11%)
Query: 191 NSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHD 250
N FH+ + C L ++V + S LDS L P + + K D
Sbjct: 104 NIFHMSLLACAL-----------EVVMATYSRSTSQNLDSG-TDLSFPWILNVLNLKAFD 151
Query: 251 GCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDS 298
K+ ++AE +L+R+++KHL E ++++SLAW+S+SPL+ I+ S
Sbjct: 152 FYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQS 200
>gi|441613864|ref|XP_003270122.2| PREDICTED: LOW QUALITY PROTEIN: retinoblastoma-associated protein
isoform 1 [Nomascus leucogenys]
Length = 928
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 13/109 (11%)
Query: 191 NSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHD 250
N FH+ + C L +IV + S LDS L P + + K D
Sbjct: 480 NVFHMSLLACAL-----------EIVMATYSRSTSQNLDSG-TDLSFPWILNVLNLKAFD 527
Query: 251 GCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDS 298
K+ ++AE +L+R+++KHL E ++++SLAW+S+SPL+ I+ S
Sbjct: 528 FYKVIESFIKAEGTLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQS 576
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 98/250 (39%), Gaps = 42/250 (16%)
Query: 16 LCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLH-----WLGCSLYVSCRKATVPTVNSN 70
LC L I + AW ++++S + G + W C + +P
Sbjct: 60 LCQKLKIPDHVRERAWLTWEKVSSVDGVLGGYIQKKKELWGICIFIAAVDLDEMP----- 114
Query: 71 RTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFT 130
T L K+ ++S+++F N ++ K+ ++ ++RL + + V +F+
Sbjct: 115 -------FTFTELQKNIEISVHKFFNLLKEIDTSTKVDNA----MSRLLKKYDVLFALFS 163
Query: 131 KYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLV 190
K EL+ + + S V + +WI F+L K E L + +DLV
Sbjct: 164 KL----------ERTCELIYLTQPSSSISTEINSALVLKVSWITFLLAKGEVLQMEDDLV 213
Query: 191 NSFHLLIATCD----LIYANVIQSKLRDIVNPDFEGMP------SNFLDSHFAPLDDPPC 240
SF L++ D L +++ + V P G P N L++
Sbjct: 214 ISFQLMLCVLDYFIKLSPPVLLKEPYKTAVIP-INGSPRTPRRGQNRSARIAKQLENDTR 272
Query: 241 IISILCKHHD 250
II +LCK H+
Sbjct: 273 IIEVLCKEHE 282
>gi|158430673|pdb|2R7G|A Chain A, Structure Of The Retinoblastoma Protein Pocket Domain In
Complex With Adenovirus E1a Cr1 Domain
gi|158430675|pdb|2R7G|C Chain C, Structure Of The Retinoblastoma Protein Pocket Domain In
Complex With Adenovirus E1a Cr1 Domain
Length = 347
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 13/109 (11%)
Query: 191 NSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHD 250
N FH+ + C L ++V + S LDS L P + + K D
Sbjct: 101 NIFHMSLLACAL-----------EVVMATYSRSTSQNLDSG-TDLSFPWILNVLNLKAFD 148
Query: 251 GCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDS 298
K+ ++AE +L+R+++KHL E ++++SLAW+S+SPL+ I+ S
Sbjct: 149 FYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQS 197
>gi|7677391|gb|AAF67147.1| retinoblastoma 1 protein [Canis lupus familiaris]
Length = 518
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 239 PCIISIL-CKHHDGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P I+++L K D K+ ++AEA+L+R+++KHL E ++++SLAW+S+SPL+ I+
Sbjct: 132 PWILNVLNLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIK 191
Query: 297 DS 298
+
Sbjct: 192 QA 193
>gi|345788752|ref|XP_534118.3| PREDICTED: retinoblastoma-associated protein [Canis lupus
familiaris]
Length = 816
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 239 PCIISIL-CKHHDGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P I+++L K D K+ ++AEA+L+R+++KHL E ++++SLAW+S+SPL+ I+
Sbjct: 403 PWILNVLNLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIK 462
Query: 297 DS 298
+
Sbjct: 463 QA 464
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 11/97 (11%)
Query: 164 STKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCD----LIYANVIQSKLRDIVNPD 219
S V + +WI F+L K E L + +DLV SF L++ D L +++ + V P
Sbjct: 75 SVLVLKVSWITFLLAKGEVLQMEDDLVISFQLMLCVLDYFIKLSPPALLKEPYKTAVIP- 133
Query: 220 FEGMP------SNFLDSHFAPLDDPPCIISILCKHHD 250
F G P N L++ II +LCK H+
Sbjct: 134 FNGSPRTPRRGQNRSARIAKQLENDTRIIEVLCKEHE 170
>gi|338715461|ref|XP_001490611.3| PREDICTED: retinoblastoma-associated protein [Equus caballus]
Length = 835
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 239 PCIISIL-CKHHDGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P I+++L K D K+ ++AEA+L+R+++KHL E ++++SLAW+S+SPL+ I+
Sbjct: 424 PWILNVLNLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIK 483
Query: 297 DS 298
+
Sbjct: 484 QA 485
>gi|288551674|gb|ADC53307.1| retinoblastoma protein [Zalophus californianus]
Length = 416
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 239 PCIISIL-CKHHDGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P I+++L K D K+ ++AEA+L+R+++KHL E ++++SLAW+S+SPL+ I+
Sbjct: 122 PWILNVLNLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIK 181
Query: 297 DS 298
+
Sbjct: 182 QA 183
>gi|403303288|ref|XP_003942268.1| PREDICTED: retinoblastoma-associated protein [Saimiri boliviensis
boliviensis]
Length = 926
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 239 PCIISIL-CKHHDGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P I+++L K D K+ ++AE +L+R+++KHL E ++++SLAW+S+SPL+ I+
Sbjct: 513 PWILNVLNLKAFDFYKVIESFIKAEGTLTREMIKHLERCEHRIMESLAWLSDSPLFDLIK 572
Query: 297 DS 298
S
Sbjct: 573 QS 574
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 96/250 (38%), Gaps = 42/250 (16%)
Query: 16 LCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLH-----WLGCSLYVSCRKATVPTVNSN 70
LC L I + AW ++++S + G + W C + +P
Sbjct: 58 LCQRLKIPDHVRERAWLTWEKVSSVDGVLGGYIQKKKELWGICIFIAAVDLDEMP----- 112
Query: 71 RTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFT 130
T L K ++S+ +F + ++ K+ ++ ++RL + + V +F+
Sbjct: 113 -------FTFTELQKIIEISVFKFFDLLKEIDTSTKVDNA----MSRLLKKYNVLLALFS 161
Query: 131 KYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLV 190
K EL+ + N S V + +WI F+L K E L + +DLV
Sbjct: 162 KL----------ERTCELIYLTQPNSSISTEINSALVLKVSWITFLLAKGEVLQMEDDLV 211
Query: 191 NSFHLLIATCD----LIYANVIQSKLRDIVNPDFEGMP------SNFLDSHFAPLDDPPC 240
SF L++ D L +++ + V P G P N L++
Sbjct: 212 ISFQLMLCVLDYFIKLSPPVLLKEPYKTAVIP-VNGSPRTPRRGQNRSARIAKQLENDTR 270
Query: 241 IISILCKHHD 250
II ILCK H+
Sbjct: 271 IIEILCKEHE 280
>gi|417405307|gb|JAA49369.1| Putative rb retinoblastoma tumor suppressor-related protein
[Desmodus rotundus]
Length = 932
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 239 PCIISIL-CKHHDGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P I+++L K D K+ ++AEA+L+R+++KHL E ++++SLAW+S+SPL+ I+
Sbjct: 519 PWILNVLNLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIK 578
Query: 297 DS 298
+
Sbjct: 579 QA 580
Score = 38.1 bits (87), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 11/97 (11%)
Query: 164 STKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCD----LIYANVIQSKLRDIVNPD 219
S V + +WI F+L K E L + +DLV SF L++ D L +++ + + P
Sbjct: 191 SVLVLKVSWITFLLAKGEVLQMEDDLVISFQLMLCVLDYFIKLSPPALLKEPYKTAIIP- 249
Query: 220 FEGMP------SNFLDSHFAPLDDPPCIISILCKHHD 250
G P N L++ +I +LCK HD
Sbjct: 250 INGSPRTPRRGQNRSARIAKQLENDTRVIEVLCKEHD 286
>gi|355715555|gb|AES05366.1| retinoblastoma 1 [Mustela putorius furo]
Length = 267
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 34/41 (82%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDS 298
++AEA+L+R+++KHL E ++++SLAW+S+SPL+ I+ +
Sbjct: 4 IKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQA 44
>gi|410947412|ref|XP_003980441.1| PREDICTED: retinoblastoma-associated protein [Felis catus]
Length = 921
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 239 PCIISIL-CKHHDGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P I+++L K D K+ ++AEA+L+R+++KHL E ++++SLAW+S+SPL+ I+
Sbjct: 509 PWILNVLNLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIK 568
Query: 297 DS 298
+
Sbjct: 569 QA 570
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Query: 167 VFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCD----LIYANVIQSKLRDIVNPDFEG 222
V + +WI F+L K E L + +DLV SF L++ D L +++ + V P F G
Sbjct: 184 VLKASWITFLLAKGEVLQMEDDLVISFQLMLCVLDYFIKLSPPALLKEPYKTAVIP-FNG 242
Query: 223 MP------SNFLDSHFAPLDDPPCIISILCKHHD 250
P N L++ II +LCK H+
Sbjct: 243 SPRTPRRGQNRSARIAKQLENDTRIIEVLCKEHE 276
>gi|4139826|pdb|1GUX|A Chain A, Rb Pocket Bound To E7 Lxcxe Motif
gi|29726891|pdb|1O9K|A Chain A, Crystal Structure Of The Retinoblastoma Tumour Suppressor
Protein Bound To E2f Peptide
gi|29726893|pdb|1O9K|C Chain C, Crystal Structure Of The Retinoblastoma Tumour Suppressor
Protein Bound To E2f Peptide
gi|29726895|pdb|1O9K|E Chain E, Crystal Structure Of The Retinoblastoma Tumour Suppressor
Protein Bound To E2f Peptide
gi|29726897|pdb|1O9K|G Chain G, Crystal Structure Of The Retinoblastoma Tumour Suppressor
Protein Bound To E2f Peptide
Length = 218
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 13/109 (11%)
Query: 191 NSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHD 250
N FH+ + C L ++V + S LDS L P + + K D
Sbjct: 109 NIFHMSLLACAL-----------EVVMATYSRSTSQNLDSG-TDLSFPWILNVLNLKAFD 156
Query: 251 GCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDS 298
K+ ++AE +L+R+++KHL E ++++SLAW+S+SPL+ I+ S
Sbjct: 157 FYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQS 205
>gi|301767484|ref|XP_002919165.1| PREDICTED: retinoblastoma-associated protein-like [Ailuropoda
melanoleuca]
Length = 925
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 239 PCIISIL-CKHHDGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P I+++L K D K+ ++AEA+L+R+++KHL E ++++SLAW+S+SPL+ I+
Sbjct: 512 PWILNVLNLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIK 571
Query: 297 DS 298
+
Sbjct: 572 QA 573
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 11/97 (11%)
Query: 164 STKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCD----LIYANVIQSKLRDIVNPD 219
S V + +WI F+L K E L + +DLV SF L++ D L +++ + V P
Sbjct: 184 SVLVLKVSWITFLLAKGEVLQMEDDLVISFQLMLCVLDYFIKLSPPALLKEPYKTAVIP- 242
Query: 220 FEGMP------SNFLDSHFAPLDDPPCIISILCKHHD 250
F G P N L++ II +LCK H+
Sbjct: 243 FNGSPRTPRRGQNRSARIAKQLENDTRIIEVLCKEHE 279
>gi|66803613|ref|XP_635645.1| Rb-like protein [Dictyostelium discoideum AX4]
gi|60463973|gb|EAL62136.1| Rb-like protein [Dictyostelium discoideum AX4]
gi|62821759|dbj|BAD95800.1| retinoblastoma-like protein [Dictyostelium discoideum]
Length = 1312
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 20/160 (12%)
Query: 76 NLVCLTSLLKH--CKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYL 133
N V L+ LLKH ++ L+QF + R + +L ++F + +LE++F ++ KY
Sbjct: 256 NSVFLSQLLKHFEGEIKLSQFFDTLRSFISNLRLGNAFEEQGRQLEQSFNTLNNLYRKYE 315
Query: 134 PMFKEMFKPPDLDELLMHVRH-----------------NKKKMIHCTSTKVFEFTWILFV 176
+F +F P + L +H N + W++F+
Sbjct: 316 QIFFTLFHPTENYILKTTQQHNYNNNSNNNNNNNNNNNNNNNNNRTNEDYLLSIGWLIFL 375
Query: 177 LTKAE-YLDVSNDLVNSFHLLIATCDLIYANVIQSKLRDI 215
K + + S D V S HLL+ + IY N S+L+ I
Sbjct: 376 FCKNKLFTKDSPDFVQSLHLLLCIINFIYVNTSISELKKI 415
>gi|194387624|dbj|BAG61225.1| unnamed protein product [Homo sapiens]
Length = 816
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 239 PCIISIL-CKHHDGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P I+++L K D K+ ++AE +L+R+++KHL E ++++SLAW+S+SPL+ I+
Sbjct: 403 PWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAWLSDSPLFDLIK 462
Query: 297 DS 298
S
Sbjct: 463 QS 464
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 78/182 (42%), Gaps = 25/182 (13%)
Query: 79 CLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLPMFKE 138
T L K+ ++S+++F N ++ K+ ++ ++RL + + V +F+K
Sbjct: 4 TFTELQKNIEISVHKFFNLLKEIDTSTKVDNA----MSRLLKKYDVLFALFSKL------ 53
Query: 139 MFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIA 198
EL+ + + S V + +WI F+L K E L + +DLV SF L++
Sbjct: 54 ----ERTCELIYLTQPSSSISTEINSALVLKVSWITFLLAKGEVLQMEDDLVISFQLMLC 109
Query: 199 TCD----LIYANVIQSKLRDIVNPDFEGMP------SNFLDSHFAPLDDPPCIISILCKH 248
D L +++ + V P G P N L++ II +LCK
Sbjct: 110 VLDYFIKLSPPMLLKEPYKTAVIP-INGSPRTPRRGQNRSARIAKQLENDTRIIEVLCKE 168
Query: 249 HD 250
H+
Sbjct: 169 HE 170
>gi|355754692|gb|EHH58593.1| pRb, partial [Macaca fascicularis]
Length = 727
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 239 PCIISIL-CKHHDGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P I+++L K D K+ ++AE +L+R+++KHL E ++++SLAW+S+SPL+ I+
Sbjct: 314 PWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAWLSDSPLFDLIK 373
Query: 297 DS 298
S
Sbjct: 374 QS 375
>gi|13604258|gb|AAK32151.1| retinoblastoma protein 1 [Pan troglodytes]
Length = 882
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 239 PCIISIL-CKHHDGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P I+++L K D K+ ++AE +L+R+++KHL E ++++SLAW+S+SPL+ I+
Sbjct: 469 PWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAWLSDSPLFDLIK 528
Query: 297 DS 298
S
Sbjct: 529 QS 530
Score = 38.1 bits (87), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 78/182 (42%), Gaps = 25/182 (13%)
Query: 79 CLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLPMFKE 138
T L K+ ++S+++F N ++ K+ ++ ++RL + + V +F+K
Sbjct: 70 TFTELQKNIEISVHKFFNLLKEIDTSTKVDNA----MSRLLKKYDVLFALFSKL------ 119
Query: 139 MFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIA 198
EL+ + + S V + +WI F+L K E L + +DLV SF L++
Sbjct: 120 ----ERTCELIYLTQPSSLISTEINSALVLKVSWITFLLAKGEVLQMEDDLVISFQLMLC 175
Query: 199 TCD----LIYANVIQSKLRDIVNPDFEGMP------SNFLDSHFAPLDDPPCIISILCKH 248
D L +++ + V P G P N L++ II +LCK
Sbjct: 176 VLDYFIKLSPPVLLKEPYKTAVIP-INGSPRTPRRGQNRSARIAKQLENDTRIIEVLCKE 234
Query: 249 HD 250
H+
Sbjct: 235 HE 236
>gi|386782129|ref|NP_001247976.1| retinoblastoma-associated protein [Macaca mulatta]
gi|383410451|gb|AFH28439.1| retinoblastoma-associated protein [Macaca mulatta]
gi|383410453|gb|AFH28440.1| retinoblastoma-associated protein [Macaca mulatta]
gi|387540698|gb|AFJ70976.1| retinoblastoma-associated protein [Macaca mulatta]
Length = 928
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 239 PCIISIL-CKHHDGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P I+++L K D K+ ++AE +L+R+++KHL E ++++SLAW+S+SPL+ I+
Sbjct: 515 PWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAWLSDSPLFDLIK 574
Query: 297 DS 298
S
Sbjct: 575 QS 576
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 99/250 (39%), Gaps = 42/250 (16%)
Query: 16 LCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLH-----WLGCSLYVSCRKATVPTVNSN 70
LC L I + AW ++++S + G + W C + +P
Sbjct: 60 LCQKLKIPDHVRERAWLTWEKVSSVDGVLGGYIQKKKELWGICIFIAAVDLDEMP----- 114
Query: 71 RTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFT 130
T L K+ ++S+++F N ++ K+ ++ ++RL + + V +F+
Sbjct: 115 -------FTFTELQKNIEISVHKFFNLLKEIDTSTKVDNA----MSRLLKKYDVLFALFS 163
Query: 131 KYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLV 190
K EL+ + + ST V + +WI F+L K E L + +DLV
Sbjct: 164 KL----------ERTCELIYLTQPSSSISTEINSTLVLKVSWITFLLAKGEVLQMEDDLV 213
Query: 191 NSFHLLIATCD----LIYANVIQSKLRDIVNPDFEGMP------SNFLDSHFAPLDDPPC 240
SF L++ D L +++ + V P G P N L++
Sbjct: 214 ISFQLMLCVLDYFIKLSPPVLLKEPYKTAVIP-INGSPRTPRRGQNRSARIAKQLENDTR 272
Query: 241 IISILCKHHD 250
II +LCK H+
Sbjct: 273 IIEVLCKEHE 282
>gi|440898457|gb|ELR49952.1| Retinoblastoma-associated protein, partial [Bos grunniens mutus]
Length = 883
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 34/41 (82%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDS 298
++AEA+L+R+++KHL E ++++SLAW+S+SPL+ I+ +
Sbjct: 491 IKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQA 531
>gi|402901984|ref|XP_003913911.1| PREDICTED: retinoblastoma-associated protein [Papio anubis]
Length = 923
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 239 PCIISIL-CKHHDGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P I+++L K D K+ ++AE +L+R+++KHL E ++++SLAW+S+SPL+ I+
Sbjct: 510 PWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAWLSDSPLFDLIK 569
Query: 297 DS 298
S
Sbjct: 570 QS 571
>gi|116004031|ref|NP_001070375.1| retinoblastoma-associated protein [Bos taurus]
gi|115304733|gb|AAI23389.1| Retinoblastoma 1 [Bos taurus]
Length = 928
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 34/41 (82%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDS 298
++AEA+L+R+++KHL E ++++SLAW+S+SPL+ I+ +
Sbjct: 536 IKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQA 576
>gi|380798509|gb|AFE71130.1| retinoblastoma-associated protein, partial [Macaca mulatta]
gi|380798511|gb|AFE71131.1| retinoblastoma-associated protein, partial [Macaca mulatta]
Length = 914
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 239 PCIISIL-CKHHDGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P I+++L K D K+ ++AE +L+R+++KHL E ++++SLAW+S+SPL+ I+
Sbjct: 501 PWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAWLSDSPLFDLIK 560
Query: 297 DS 298
S
Sbjct: 561 QS 562
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 99/250 (39%), Gaps = 42/250 (16%)
Query: 16 LCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLH-----WLGCSLYVSCRKATVPTVNSN 70
LC L I + AW ++++S + G + W C + +P
Sbjct: 46 LCQKLKIPDHVRERAWLTWEKVSSVDGVLGGYIQKKKELWGICIFIAAVDLDEMP----- 100
Query: 71 RTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFT 130
T L K+ ++S+++F N ++ K+ ++ ++RL + + V +F+
Sbjct: 101 -------FTFTELQKNIEISVHKFFNLLKEIDTSTKVDNA----MSRLLKKYDVLFALFS 149
Query: 131 KYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLV 190
K EL+ + + ST V + +WI F+L K E L + +DLV
Sbjct: 150 KL----------ERTCELIYLTQPSSSISTEINSTLVLKVSWITFLLAKGEVLQMEDDLV 199
Query: 191 NSFHLLIATCD----LIYANVIQSKLRDIVNPDFEGMP------SNFLDSHFAPLDDPPC 240
SF L++ D L +++ + V P G P N L++
Sbjct: 200 ISFQLMLCVLDYFIKLSPPVLLKEPYKTAVIP-INGSPRTPRRGQNRSARIAKQLENDTR 258
Query: 241 IISILCKHHD 250
II +LCK H+
Sbjct: 259 IIEVLCKEHE 268
>gi|301611245|ref|XP_002935161.1| PREDICTED: retinoblastoma-associated protein-like [Xenopus
(Silurana) tropicalis]
Length = 875
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 84/193 (43%), Gaps = 33/193 (17%)
Query: 16 LCMALNIDSTTAKEAWNAYKEM-SHHYTLEGS--QLHWLGCSLYVS---CRKATVPTVNS 69
LC L I + +AW Y+++ S Y + + + LG LY++ C + T
Sbjct: 33 LCETLKISNNVRDKAWKTYEKIFSSGYMMREATKKTELLGLCLYIASVDCEEMTF----- 87
Query: 70 NRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKW-ADMRKLPDSFRSKIARLERNFAVSKVI 128
T LLK +S+++ R+ +M L + + I++L++ + ++
Sbjct: 88 ---------TFTELLKTLTLSVSRCFRLLREMDINMDVLSNKVDNAISKLKKKYETMCLL 138
Query: 129 FTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSND 188
+ K+ F E++ +HN + S + + TWI F+L + + L + +D
Sbjct: 139 YQKFQRTF----------EIIFEEQHNTLASVDTAS--ILKGTWITFLLARGKILQMDDD 186
Query: 189 LVNSFHLLIATCD 201
LV S LL+ D
Sbjct: 187 LVISCQLLLCVLD 199
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 31/43 (72%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQ 300
++AE SL+ D++K+L E Q+++SLAW S+SPL+ I + +
Sbjct: 488 IKAEPSLTSDMIKYLERCEHQIMESLAWQSDSPLFDLIRQTRE 530
>gi|22135753|gb|AAM91029.1| retinoblastoma susceptibility protein [Danio rerio]
Length = 314
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 33/48 (68%)
Query: 257 IVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPG 304
++AE +L D+VKHL E +++SLAW ++SPL+ ++ S +E PG
Sbjct: 88 FIKAEPTLKHDMVKHLEQCEHVIMESLAWRADSPLFDLLKQSREEGPG 135
>gi|168275724|dbj|BAG10582.1| retinoblastoma-associated protein [synthetic construct]
Length = 928
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 239 PCIISIL-CKHHDGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P I+++L K D K+ ++AE +L+R+++KHL E ++++SLAW+S+SPL+ I+
Sbjct: 515 PWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAWLSDSPLFDLIK 574
Query: 297 DS 298
S
Sbjct: 575 QS 576
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 101/250 (40%), Gaps = 42/250 (16%)
Query: 16 LCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLH-----WLGCSLYVSCRKATVPTVNSN 70
LC L I + AW ++++S + G + W G ++++
Sbjct: 60 LCQKLKIPDHVRERAWLTWEKVSSVDEVLGGYIQKKKELW-GICIFIAAVD--------- 109
Query: 71 RTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFT 130
++ T L K+ ++S+++F N ++ K+ ++ ++RL + + V +F+
Sbjct: 110 --LDEMSFTFTELQKNIEISVHKFFNLLKEIDTSTKVDNA----MSRLLKKYDVLFALFS 163
Query: 131 KYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLV 190
K EL+ + + S V + +WI F+L K E L + +DLV
Sbjct: 164 KL----------ERTCELIYLTQPSSSISTEINSALVLKVSWITFLLAKGEVLQMEDDLV 213
Query: 191 NSFHLLIATCD----LIYANVIQSKLRDIVNPDFEGMP------SNFLDSHFAPLDDPPC 240
SF L++ D L +++ + V P G P N L++
Sbjct: 214 ISFQLMLCVLDYFIKLSPPMLLKEPYKTAVIP-INGSPRTPRRGQNRSARIAKQLENDTR 272
Query: 241 IISILCKHHD 250
II +LCK H+
Sbjct: 273 IIEVLCKEHE 282
>gi|108773787|ref|NP_000312.2| retinoblastoma-associated protein [Homo sapiens]
gi|397480396|ref|XP_003811470.1| PREDICTED: retinoblastoma-associated protein [Pan paniscus]
gi|132164|sp|P06400.2|RB_HUMAN RecName: Full=Retinoblastoma-associated protein; AltName:
Full=p105-Rb; AltName: Full=pRb; Short=Rb; AltName:
Full=pp110
gi|190946|gb|AAA69806.1| retinoblastoma-associated protein [Homo sapiens]
gi|190963|gb|AAA69808.1| retinoblastoma suceptibility protein [Homo sapiens]
gi|292421|gb|AAA53483.1| retinoblastoma susceptibility protein [Homo sapiens]
gi|521212|gb|AAA53484.1| retinoblastoma susceptibility protein [Homo sapiens]
gi|793995|gb|AAB59465.1| retinoblastoma suspectibility protein [Homo sapiens]
gi|24660140|gb|AAH39060.1| Retinoblastoma 1 [Homo sapiens]
gi|26252120|gb|AAH40540.1| Retinoblastoma 1 [Homo sapiens]
gi|119629198|gb|EAX08793.1| retinoblastoma 1 (including osteosarcoma), isoform CRA_a [Homo
sapiens]
gi|119629199|gb|EAX08794.1| retinoblastoma 1 (including osteosarcoma), isoform CRA_a [Homo
sapiens]
gi|123981322|gb|ABM82490.1| retinoblastoma 1 (including osteosarcoma) [synthetic construct]
gi|123996153|gb|ABM85678.1| retinoblastoma 1 (including osteosarcoma) [synthetic construct]
gi|158255952|dbj|BAF83947.1| unnamed protein product [Homo sapiens]
Length = 928
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 239 PCIISIL-CKHHDGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P I+++L K D K+ ++AE +L+R+++KHL E ++++SLAW+S+SPL+ I+
Sbjct: 515 PWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAWLSDSPLFDLIK 574
Query: 297 DS 298
S
Sbjct: 575 QS 576
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 78/182 (42%), Gaps = 25/182 (13%)
Query: 79 CLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLPMFKE 138
T L K+ ++S+++F N ++ K+ ++ ++RL + + V +F+K
Sbjct: 116 TFTELQKNIEISVHKFFNLLKEIDTSTKVDNA----MSRLLKKYDVLFALFSKL------ 165
Query: 139 MFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIA 198
EL+ + + S V + +WI F+L K E L + +DLV SF L++
Sbjct: 166 ----ERTCELIYLTQPSSSISTEINSALVLKVSWITFLLAKGEVLQMEDDLVISFQLMLC 221
Query: 199 TCD----LIYANVIQSKLRDIVNPDFEGMP------SNFLDSHFAPLDDPPCIISILCKH 248
D L +++ + V P G P N L++ II +LCK
Sbjct: 222 VLDYFIKLSPPMLLKEPYKTAVIP-INGSPRTPRRGQNRSARIAKQLENDTRIIEVLCKE 280
Query: 249 HD 250
H+
Sbjct: 281 HE 282
>gi|62087156|dbj|BAD92025.1| Retinoblastoma-associated protein variant [Homo sapiens]
Length = 960
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 239 PCIISIL-CKHHDGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P I+++L K D K+ ++AE +L+R+++KHL E ++++SLAW+S+SPL+ I+
Sbjct: 547 PWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAWLSDSPLFDLIK 606
Query: 297 DS 298
S
Sbjct: 607 QS 608
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 101/250 (40%), Gaps = 42/250 (16%)
Query: 16 LCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLH-----WLGCSLYVSCRKATVPTVNSN 70
LC L I + AW ++++S + G + W G ++++
Sbjct: 92 LCQKLKIPDHVRERAWLTWEKVSSVDEVLGGYIQKKKELW-GICIFIAAVD--------- 141
Query: 71 RTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFT 130
++ T L K+ ++S+++F N ++ K+ ++ ++RL + + V +F+
Sbjct: 142 --LDEMSFTFTELQKNIEISVHKFFNLLKEIDTSTKVDNA----MSRLLKKYDVLFALFS 195
Query: 131 KYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLV 190
K EL+ + + S V + +WI F+L K E L + +DLV
Sbjct: 196 KL----------ERTCELIYLTQPSSSISTEINSALVLKVSWITFLLAKGEVLQMEDDLV 245
Query: 191 NSFHLLIATCD----LIYANVIQSKLRDIVNPDFEGMP------SNFLDSHFAPLDDPPC 240
SF L++ D L +++ + V P G P N L++
Sbjct: 246 ISFQLMLCVLDYFIKLSPPMLLKEPYKTAVIP-INGSPRTPRRGQNRSARIAKQLENDTR 304
Query: 241 IISILCKHHD 250
II +LCK H+
Sbjct: 305 IIEVLCKEHE 314
>gi|24754020|gb|AAN64133.1| retinoblastoma 1 (including osteosarcoma) [Homo sapiens]
Length = 928
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 239 PCIISIL-CKHHDGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P I+++L K D K+ ++AE +L+R+++KHL E ++++SLAW+S+SPL+ I+
Sbjct: 515 PWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAWLSDSPLFDLIK 574
Query: 297 DS 298
S
Sbjct: 575 QS 576
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 78/182 (42%), Gaps = 25/182 (13%)
Query: 79 CLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLPMFKE 138
T L K+ ++S+++F N ++ K+ ++ ++RL + + V +F+K
Sbjct: 116 TFTELQKNIEISVHKFFNLLKEIDTSTKVDNA----MSRLLKKYDVLFALFSKL------ 165
Query: 139 MFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIA 198
EL+ + + S V + +WI F+L K E L + +DLV SF L++
Sbjct: 166 ----ERTCELIYLTQPSSSISTEINSALVLKVSWITFLLAKGEVLQMEDDLVISFQLMLC 221
Query: 199 TCD----LIYANVIQSKLRDIVNPDFEGMP------SNFLDSHFAPLDDPPCIISILCKH 248
D L +++ + V P G P N L++ II +LCK
Sbjct: 222 VLDYFIKLSPPMLLKEPYKTAVIP-INGSPRTPRRGQNRSARIAKQLENDTRIIEVLCKE 280
Query: 249 HD 250
H+
Sbjct: 281 HE 282
>gi|190959|gb|AAA69807.1| retinoblastoma susceptibility protein [Homo sapiens]
Length = 928
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 239 PCIISIL-CKHHDGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P I+++L K D K+ ++AE +L+R+++KHL E ++++SLAW+S+SPL+ I+
Sbjct: 515 PWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAWLSDSPLFDLIK 574
Query: 297 DS 298
S
Sbjct: 575 QS 576
>gi|332841285|ref|XP_509777.3| PREDICTED: retinoblastoma-associated protein [Pan troglodytes]
gi|410214624|gb|JAA04531.1| retinoblastoma 1 [Pan troglodytes]
gi|410264018|gb|JAA19975.1| retinoblastoma 1 [Pan troglodytes]
gi|410307218|gb|JAA32209.1| retinoblastoma 1 [Pan troglodytes]
Length = 928
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 239 PCIISIL-CKHHDGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P I+++L K D K+ ++AE +L+R+++KHL E ++++SLAW+S+SPL+ I+
Sbjct: 515 PWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAWLSDSPLFDLIK 574
Query: 297 DS 298
S
Sbjct: 575 QS 576
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 78/182 (42%), Gaps = 25/182 (13%)
Query: 79 CLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLPMFKE 138
T L K+ ++S+++F N ++ K+ ++ ++RL + + V +F+K
Sbjct: 116 TFTELQKNIEISVHKFFNLLKEIDTSTKVDNA----MSRLLKKYDVLFALFSKL------ 165
Query: 139 MFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIA 198
EL+ + + S V + +WI F+L K E L + +DLV SF L++
Sbjct: 166 ----ERTCELIYLTQPSSSISTEINSALVLKVSWITFLLAKGEVLQMEDDLVISFQLMLC 221
Query: 199 TCD----LIYANVIQSKLRDIVNPDFEGMP------SNFLDSHFAPLDDPPCIISILCKH 248
D L +++ + V P G P N L++ II +LCK
Sbjct: 222 VLDYFIKLSPPVLLKEPYKTAVIP-INGSPRTPRRGQNRSARIAKQLENDTRIIEVLCKE 280
Query: 249 HD 250
H+
Sbjct: 281 HE 282
>gi|296481832|tpg|DAA23947.1| TPA: retinoblastoma 1 [Bos taurus]
Length = 928
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 34/41 (82%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDS 298
++AEA+L+R+++KHL E ++++SLAW+S+SPL+ I+ +
Sbjct: 536 IKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQA 576
>gi|194390566|dbj|BAG62042.1| unnamed protein product [Homo sapiens]
Length = 907
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 239 PCIISIL-CKHHDGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P I+++L K D K+ ++AE +L+R+++KHL E ++++SLAW+S+SPL+ I+
Sbjct: 494 PWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAWLSDSPLFDLIK 553
Query: 297 DS 298
S
Sbjct: 554 QS 555
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 101/250 (40%), Gaps = 42/250 (16%)
Query: 16 LCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLH-----WLGCSLYVSCRKATVPTVNSN 70
LC L I + AW ++++S + G + W G ++++
Sbjct: 39 LCQKLKIPDHVRERAWLTWEKVSSVDGVLGGYIQKKKELW-GICIFIAAVD--------- 88
Query: 71 RTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFT 130
++ T L K+ ++S+++F N ++ K+ ++ ++RL + + V +F+
Sbjct: 89 --LDEMSFTFTELQKNIEISVHKFFNLLKEIDTSTKVDNA----MSRLLKKYDVLFALFS 142
Query: 131 KYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLV 190
K EL+ + + S V + +WI F+L K E L + +DLV
Sbjct: 143 KL----------ERTCELIYLTQPSSSISTEINSALVLKVSWITFLLAKGEVLQMEDDLV 192
Query: 191 NSFHLLIATCD----LIYANVIQSKLRDIVNPDFEGMP------SNFLDSHFAPLDDPPC 240
SF L++ D L +++ + V P G P N L++
Sbjct: 193 ISFQLMLCVLDYFIKLSPPMLLKEPYKTAVIP-INGSPRTPRRGQNRSARIAKQLENDTR 251
Query: 241 IISILCKHHD 250
II +LCK H+
Sbjct: 252 IIEVLCKEHE 261
>gi|388326925|pdb|4ELJ|A Chain A, Crystal Structure Of The Inactive Retinoblastoma Protein
Phosphorylated At T373
Length = 656
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 13/109 (11%)
Query: 191 NSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHD 250
N FH+ + C L ++V + S LDS L P + + K D
Sbjct: 408 NIFHMSLLACAL-----------EVVMATYSRSTSQNLDSG-TDLSFPWILNVLNLKAFD 455
Query: 251 GCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDS 298
K+ ++AE +L+R+++KHL E ++++SLAW+S+SPL+ I+ S
Sbjct: 456 FYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQS 504
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 32/173 (18%)
Query: 80 LTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFTKYLPMFKEM 139
T L K+ ++S+++F N ++ K+ ++ ++RL + + V +F+K
Sbjct: 68 FTELQKNIEISVHKFFNLLKEIDTSTKVDNA----MSRLLKKYDVLFALFSKL------- 116
Query: 140 FKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIAT 199
EL+ + + S V + +WI F+L K E L + +DLV SF L++
Sbjct: 117 ---ERTCELIYLTQPSSSISTEINSALVLKVSWITFLLAKGEVLQMEDDLVISFQLMLCV 173
Query: 200 CDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHF--APLDDPPCIISILCKHHD 250
D + P L + A +++ II +LCK H+
Sbjct: 174 LDYF----------------IKLSPPMLLKEPYKTAVIENDTRIIEVLCKEHE 210
>gi|170523026|gb|ACB20723.1| retinoblastoma 1 [Ovis aries]
Length = 260
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 34/41 (82%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDS 298
++AEA+L+R+++KHL E ++++SLAW+S+SPL+ I+ +
Sbjct: 157 IKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQA 197
>gi|74215550|dbj|BAE21400.1| unnamed protein product [Mus musculus]
Length = 549
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 239 PCIISIL-CKHHDGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P I+++L K D K+ ++ EA+L+R+++KHL E ++++SLAW+S+SPL+ I+
Sbjct: 137 PWILNVLNLKAFDFYKVIESFIKVEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIK 196
Query: 297 DS 298
S
Sbjct: 197 QS 198
>gi|426236719|ref|XP_004012315.1| PREDICTED: retinoblastoma-associated protein [Ovis aries]
Length = 960
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 34/41 (82%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDS 298
++AEA+L+R+++KHL E ++++SLAW+S+SPL+ I+ +
Sbjct: 568 IKAEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQA 608
>gi|74138763|dbj|BAE27194.1| unnamed protein product [Mus musculus]
Length = 748
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 239 PCIISIL-CKHHDGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P I+++L K D K+ ++ EA+L+R+++KHL E ++++SLAW+S+SPL+ I+
Sbjct: 336 PWILNVLNLKAFDFYKVIESFIKVEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIK 395
Query: 297 DS 298
S
Sbjct: 396 QS 397
>gi|149049942|gb|EDM02266.1| retinoblastoma 1 [Rattus norvegicus]
Length = 815
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 239 PCIISIL-CKHHDGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P I+++L K D K+ ++ EA+L+R+++KHL E ++++SLAW+S+SPL+ I+
Sbjct: 403 PWILNVLNLKAFDFYKVIESFIKVEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIK 462
Query: 297 DS 298
S
Sbjct: 463 QS 464
>gi|185133477|ref|NP_001117728.1| retinoblastoma-associated protein [Oncorhynchus mykiss]
gi|4008032|gb|AAD13390.1| retinoblastoma 1 [Oncorhynchus mykiss]
Length = 910
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 51/262 (19%), Positives = 98/262 (37%), Gaps = 52/262 (19%)
Query: 11 HQHQE-------LCMALNIDSTTAKEAWNAYK--EMSHHYTLEGSQLHWLGCSLYVSCRK 61
+HQE LC +L + AW +K + S L+ + W C L+V+
Sbjct: 35 EKHQEKDADFMTLCQSLQVIDAVCDRAWTIWKAVQASVDKVLDTQKKLWAAC-LFVAVID 93
Query: 62 ATVPTVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKW-ADMRKLPDSFRSKIARLER 120
+E T +LK +++ QFL +K ++ + S + RLE+
Sbjct: 94 -----------LEIASFTFTQILKAVDLNVKQFLGLLKKMDVNLDTISTKVNSAVTRLEK 142
Query: 121 NFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKA 180
+ VS+ ++ ++ +++ + ++ W +F+L K
Sbjct: 143 KYDVSRALYQRFEKTCSKIYA----------------EDSEAKGKEILRSCWTMFLLAKG 186
Query: 181 EYLDVSNDLVNSFHLLIATCDL--------IYANVIQSKLRDIVNPDFEGMPSNFLDSHF 232
L + ++LV S HL++ + + + QS + +P N S
Sbjct: 187 RALQMEDELVISLHLMVCVLEFFIRRCPPSLLQPLYQSVISTAQSPPTRTSRRN--QSKA 244
Query: 233 APLDDPPCI----ISILCKHHD 250
P PP + + LCK +D
Sbjct: 245 KPRQAPPEVDVQLLETLCKEND 266
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIP 303
++AE SLS+DIVKHL E +++++AW +SPL++ ++ + +E P
Sbjct: 526 IKAEPSLSKDIVKHLERCEHLIMETIAWREDSPLFELLKRTREEGP 571
>gi|74187799|dbj|BAE24548.1| unnamed protein product [Mus musculus]
Length = 921
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 239 PCIISIL-CKHHDGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P I+++L K D K+ ++ EA+L+R+++KHL E ++++SLAW+S+SPL+ I+
Sbjct: 509 PWILNVLNLKAFDFYKVIESFIKVEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIK 568
Query: 297 DS 298
S
Sbjct: 569 QS 570
>gi|188528630|ref|NP_033055.2| retinoblastoma-associated protein [Mus musculus]
gi|341941878|sp|P13405.2|RB_MOUSE RecName: Full=Retinoblastoma-associated protein; AltName: Full=pRb;
Short=Rb; AltName: Full=pp105
gi|66396541|gb|AAH96525.1| Retinoblastoma 1 [Mus musculus]
gi|89357181|gb|ABD72475.1| retinoblastoma susceptibility protein [Mus musculus]
Length = 921
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 239 PCIISIL-CKHHDGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P I+++L K D K+ ++ EA+L+R+++KHL E ++++SLAW+S+SPL+ I+
Sbjct: 509 PWILNVLNLKAFDFYKVIESFIKVEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIK 568
Query: 297 DS 298
S
Sbjct: 569 QS 570
>gi|326914172|ref|XP_003203401.1| PREDICTED: retinoblastoma-associated protein-like [Meleagris
gallopavo]
Length = 950
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 34/50 (68%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
++ E SL+RD++KHL E ++++SLAW S+SPL+ I+ S + +Q
Sbjct: 557 IKVEPSLTRDMIKHLERCEHRIMESLAWQSDSPLFDLIKQSKEREGQTDQ 606
>gi|288558841|sp|P33568.3|RB_RAT RecName: Full=Retinoblastoma-associated protein; AltName: Full=pRb;
Short=Rb; AltName: Full=pp105
Length = 920
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 239 PCIISIL-CKHHDGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P I+++L K D K+ ++ EA+L+R+++KHL E ++++SLAW+S+SPL+ I+
Sbjct: 508 PWILNVLNLKAFDFYKVIESFIKVEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIK 567
Query: 297 DS 298
S
Sbjct: 568 QS 569
>gi|148703912|gb|EDL35859.1| retinoblastoma 1 [Mus musculus]
Length = 881
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 239 PCIISIL-CKHHDGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P I+++L K D K+ ++ EA+L+R+++KHL E ++++SLAW+S+SPL+ I+
Sbjct: 469 PWILNVLNLKAFDFYKVIESFIKVEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIK 528
Query: 297 DS 298
S
Sbjct: 529 QS 530
>gi|45383327|ref|NP_989750.1| retinoblastoma-associated protein [Gallus gallus]
gi|82136242|sp|Q90600.1|RB_CHICK RecName: Full=Retinoblastoma-associated protein; AltName:
Full=p104; AltName: Full=pRb; Short=Rb
gi|459445|emb|CAA51019.1| p104 chicken Rb [Gallus gallus]
Length = 921
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 34/50 (68%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
++ E SL+RD++KHL E ++++SLAW S+SPL+ I+ S + +Q
Sbjct: 528 IKVEPSLTRDMIKHLERCEHRIMESLAWQSDSPLFDLIKQSKEREGQTDQ 577
Score = 38.1 bits (87), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 96/255 (37%), Gaps = 39/255 (15%)
Query: 16 LCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCSLYVSCRKAT--VPTVNSNRTI 73
LC AL + ++AW Y+ ++ G S Y +K T V +
Sbjct: 44 LCDALKAPDSVREKAWMTYQSLAAAD----------GASAYNKKKKETWGVCIFIVAIDL 93
Query: 74 EGNLVCLTSLLKHCKMSLNQFLNKCRKW-ADMRKLPDSFRSKIARLERNFAVSKVIFTKY 132
+ T LLK +S+ F ++ +M + S ++RL++ + V ++ K+
Sbjct: 94 DEMTFTFTELLKSLSISVCTFFQFLKEVDVNMDTVSTKVDSTVSRLKKKYDVLLALYHKF 153
Query: 133 LPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNS 192
++ E+ + +S V + WI F+L K + L + +DLV S
Sbjct: 154 ERTCGLIYLEQPSSEISAEL----------SSVLVLKNYWITFLLAKGKVLQMEDDLVIS 203
Query: 193 FHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAP-------------LDDPP 239
F LL+ D + L++ + N S P +D
Sbjct: 204 FQLLLCVLDYFIKLSPPAMLKEPYKSAVTALTVN--GSTRTPRRGQNRNARASKQIDTDT 261
Query: 240 CIISILCKHHDGCKL 254
+I ILCK HD C L
Sbjct: 262 KVIEILCKEHD-CNL 275
>gi|508202|gb|AAA19644.1| Rb [Gallus gallus]
Length = 919
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 32/43 (74%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQ 300
++ E SL+RD++KHL E ++++SLAW S+SPL+ I+ S +
Sbjct: 527 IKVEPSLTRDMIKHLERCEHRIMESLAWQSDSPLFDLIKQSKE 569
>gi|603962|dbj|BAA04958.1| retinoblastoma protein [Rattus norvegicus]
Length = 899
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 239 PCIISIL-CKHHDGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P I+++L K D K+ ++ EA+L+R+++KHL E ++++SLAW+S+SPL+ I+
Sbjct: 487 PWILNVLNLKAFDFYKVIESFIKVEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIK 546
Query: 297 DS 298
S
Sbjct: 547 QS 548
>gi|200453|gb|AAA39964.1| pp105 Rb protein [Mus musculus]
Length = 921
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 239 PCIISIL-CKHHDGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P I+++L K D K+ ++ EA+L+R+++KHL E ++++SLAW+S+SPL+ I+
Sbjct: 509 PWILNVLNLKAFDFYKVIESFIKVEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIK 568
Query: 297 DS 298
S
Sbjct: 569 QS 570
>gi|281332095|ref|NP_058741.1| retinoblastoma-associated protein [Rattus norvegicus]
Length = 920
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 239 PCIISIL-CKHHDGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P I+++L K D K+ ++ EA+L+R+++KHL E ++++SLAW+S+SPL+ I+
Sbjct: 508 PWILNVLNLKAFDFYKVIESFIKVEANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIK 567
Query: 297 DS 298
S
Sbjct: 568 QS 569
>gi|326431913|gb|EGD77483.1| hypothetical protein PTSG_08579 [Salpingoeca sp. ATCC 50818]
Length = 816
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 91/226 (40%), Gaps = 39/226 (17%)
Query: 6 DNETAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLE--GSQLHWLGCSLYVSCRKAT 63
D E + + C LN+D T A+N + ++ + S W C +Y+ A
Sbjct: 2 DKEEYAKFRACCSQLNLDHNTVDRAYNIWLRSRTCFSRDELKSLYPWFACVVYL----AI 57
Query: 64 VPTVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFA 123
P ++++ + V + + + M QF ++ +++A L KI +L R
Sbjct: 58 HPDFQTDKSKSAH-VHVKGIFQLACMRPEQFYHQLQEFAARANL-----DKIPQLRRAAQ 111
Query: 124 VSKVIF---TKYLPM-------------FKEMFKP----PDLDELLMHVRHNKKKMIHCT 163
+ VIF TK M F+ +F P P LD+ H + I T
Sbjct: 112 ENTVIFHAQTKLKTMEATKICAHYFHDIFEHVFLPALQSPQLDD---HYDVDVSAAIALT 168
Query: 164 STKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCDLIYANVIQ 209
EF W LF++ KA + D+ F LL T D +Y NV +
Sbjct: 169 R----EFAWTLFLICKAAVPLLLGDISKMFSLLACTMDFVYTNVAR 210
>gi|399571554|gb|AFP48333.1| retinoblastoma protein [Sus scrofa]
Length = 939
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 239 PCIISIL-CKHHDGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P I+++L K D K+ ++AEA+L+R+++KHL E ++++SLAW S+SPL+ I+
Sbjct: 525 PWILNVLNLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWRSDSPLFDLIK 584
Query: 297 DS 298
+
Sbjct: 585 QT 586
>gi|388326926|pdb|4ELL|A Chain A, Structure Of The Inactive Retinoblastoma Protein Pocket
Domain
gi|388326927|pdb|4ELL|B Chain B, Structure Of The Inactive Retinoblastoma Protein Pocket
Domain
Length = 411
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 13/109 (11%)
Query: 191 NSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHFAPLDDPPCIISILCKHHD 250
N FH+ + C L ++V + S LDS L P + + K D
Sbjct: 104 NIFHMSLLACAL-----------EVVMATYSRSTSQNLDSG-TDLSFPWILNVLNLKAFD 151
Query: 251 GCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDS 298
K+ ++AE +L+R+++KHL E ++++S AW+S+SPL+ I+ S
Sbjct: 152 FYKVIESFIKAEGNLTREMIKHLERCEHRIMESFAWLSDSPLFDLIKQS 200
>gi|350589853|ref|XP_001926888.4| PREDICTED: retinoblastoma-associated protein [Sus scrofa]
Length = 938
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 239 PCIISIL-CKHHDGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P I+++L K D K+ ++AEA+L+R+++KHL E ++++SLAW S+SPL+ I+
Sbjct: 524 PWILNVLNLKAFDFYKVIESFIKAEANLTREMIKHLERCEHRIMESLAWRSDSPLFDLIK 583
Query: 297 DS 298
+
Sbjct: 584 QA 585
>gi|355715597|gb|AES05378.1| retinoblastoma-like 1 [Mustela putorius furo]
Length = 68
Score = 44.7 bits (104), Expect = 0.090, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 14 QELCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLHWLGCS 54
Q LC LN+D +A EA + + + +Y+LEG +HWL CS
Sbjct: 28 QALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVIHWLACS 68
>gi|168029230|ref|XP_001767129.1| Rb -related protein [Physcomitrella patens subsp. patens]
gi|162681625|gb|EDQ68050.1| Rb -related protein [Physcomitrella patens subsp. patens]
Length = 937
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 75/366 (20%), Positives = 138/366 (37%), Gaps = 80/366 (21%)
Query: 20 LNIDSTTAKEAWNAYKEMSH----------HYTLEGSQLHWLGCSLYV----------SC 59
L +D T+KEA + +KE T+E ++ W C LYV
Sbjct: 1 LCLDLQTSKEAMHLFKESKSLLIANADSLGTGTVEETERLWGACVLYVVKAFRCGAAVGG 60
Query: 60 RKATVPTVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCR--KWADMRKLPDSFRSKIAR 117
K+ V ++ G++V L H M + + + +W R ++
Sbjct: 61 DKSESNAVGTDMYWHGSVVEFFKELPHFLMKVGPIVKQMYGDEWEK--------RLQVKE 112
Query: 118 LERNFAVSKVIFTKYLPMFKEMFKPPD-----LDELLMHVRHNKKKMIHCTSTKVFEFTW 172
++ NF +FT Y ++++ F PD + L V + IH +F W
Sbjct: 113 VQANFVHLTALFTYYKRVYQDFFLSPDTFSNIVSRSLSGVTDDHHVSIH------MQFGW 166
Query: 173 ILFVLTKAEYLDVSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDSHF 232
+LF+ + + +DLV + L+A ++ + + PD
Sbjct: 167 MLFLALRMHVIQQFSDLVTCTNALLAVMVILILH---------MPPDLRKF--------- 208
Query: 233 APLDDPPCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLW 292
L DP + + +G L + A + + V LNL E+ +N+ +
Sbjct: 209 -SLQDP---VRFAKRSSEGIHLVASLCATYYAADEDV--LNLLEK---------ANATIS 253
Query: 293 KNIEDSGQEIPGCEQKLR------GNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDF 346
K S +++ G + G + L ++ ++ N +V+ K YE+ S G
Sbjct: 254 KLFGKSMKDLHGLQTSEHFLGINLGGLSYLEGFMDNKSLASNLRVLEKDYEDAYQSRGGL 313
Query: 347 DERIFL 352
DER+F+
Sbjct: 314 DERMFI 319
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 27/38 (71%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNI 295
VR E +L R++ +HLN EE++L+S+AW S ++ ++
Sbjct: 549 VRHEDTLPRELKRHLNTIEERILESMAWGKGSSMYNSL 586
>gi|354487932|ref|XP_003506125.1| PREDICTED: retinoblastoma-associated protein-like [Cricetulus
griseus]
Length = 946
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 239 PCIISIL-CKHHDGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P I+++L K D K+ ++ E +L+R+++KHL E ++++SLAW+S+SPL+ I+
Sbjct: 534 PWILNVLNLKAFDFYKVIESFIKVETNLTREMIKHLERCEHRIMESLAWLSDSPLFDLIK 593
Query: 297 DS 298
S
Sbjct: 594 QS 595
>gi|390457676|ref|XP_002742717.2| PREDICTED: retinoblastoma-associated protein [Callithrix jacchus]
Length = 1729
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 32/41 (78%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDS 298
++AE +L+R+++KHL E ++++SLAW S+SPL+ I+ S
Sbjct: 1337 IKAEGNLTREMIKHLERCEHRIMESLAWHSDSPLFDLIKQS 1377
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 11/114 (9%)
Query: 147 ELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCD----L 202
EL+ + + S V + +WI F+L K E L + +DLV SF L++ D L
Sbjct: 971 ELIYLTQPSSSISTEINSALVLKVSWITFLLAKGEVLQMEDDLVISFQLMLCVLDYFIKL 1030
Query: 203 IYANVIQSKLRDIVNPDFEGMP------SNFLDSHFAPLDDPPCIISILCKHHD 250
+++ + V P G P N L++ II +LCK H+
Sbjct: 1031 SPPVLLKEPYKTAVIP-INGSPRTPRRGQNRSARIAKQLENDTRIIEVLCKEHE 1083
>gi|225756|prf||1312364A nuclear phosphoprotein
Length = 928
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 239 PCIISIL-CKHHDGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P I+++L K D K+ ++AE +L+R+++K+L E ++++SLAW+S+SPL+ I+
Sbjct: 515 PWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKNLERCEHRIMESLAWLSDSPLFDLIK 574
Query: 297 DS 298
S
Sbjct: 575 QS 576
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 101/250 (40%), Gaps = 42/250 (16%)
Query: 16 LCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLH-----WLGCSLYVSCRKATVPTVNSN 70
LC L I + AW ++++S + G + W G ++++
Sbjct: 60 LCQKLKIPDMVRERAWLTWEKVSSVDGVLGGYIQKKKELW-GICIFIAAVD--------- 109
Query: 71 RTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFT 130
++ T L K+ ++S+++F N ++ K+ ++ ++RL + + V +F+
Sbjct: 110 --LDEMSFTFTELQKNIEISVHKFFNLLKEIDTSTKVDNA----MSRLLKKYDVLFALFS 163
Query: 131 KYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLV 190
K EL+ + + S V + +WI F+L K E L + +DLV
Sbjct: 164 KL----------ERTCELIYLTQPSSSISTEINSALVLKVSWITFLLAKGEVLQMEDDLV 213
Query: 191 NSFHLLIATCD----LIYANVIQSKLRDIVNPDFEGMP------SNFLDSHFAPLDDPPC 240
SF L++ D L +++ + V P G P N L++
Sbjct: 214 ISFQLMLCVLDYFIKLSPPMLLKEPYKTAVIP-INGSPRTPRRGQNRSARIAKQLENDTR 272
Query: 241 IISILCKHHD 250
II +LCK H+
Sbjct: 273 IIEVLCKEHE 282
>gi|121077851|gb|ABM47317.1| retinoblastoma-related protein [Volvox carteri f. nagariensis]
gi|169626712|gb|ACA58120.1| retinoblastoma-related protein 1 [Volvox carteri f. nagariensis]
gi|297592069|gb|ADI46854.1| MAT3f [Volvox carteri f. nagariensis]
Length = 1107
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 29/38 (76%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNI 295
VR+ +L RD+ +HL L EE++L+SLAW ++SPL+ I
Sbjct: 603 VRSITTLPRDLKRHLFLVEEKILESLAWEADSPLYSLI 640
>gi|449280345|gb|EMC87672.1| Retinoblastoma-associated protein, partial [Columba livia]
Length = 837
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 34/50 (68%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
++AE +L+R+++KHL E ++++SLAW S SP++ I+ S + +Q
Sbjct: 456 IKAEPNLTREMIKHLERCEHRIMESLAWQSGSPVFDLIKQSKEREGQADQ 505
>gi|242079805|ref|XP_002444671.1| hypothetical protein SORBIDRAFT_07g025760 [Sorghum bicolor]
gi|241941021|gb|EES14166.1| hypothetical protein SORBIDRAFT_07g025760 [Sorghum bicolor]
Length = 1012
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 148/373 (39%), Gaps = 70/373 (18%)
Query: 5 ADNETAHQHQELCMA-LNIDSTTAKEAWNAYKEMSH----------HYTLEGSQLHWLGC 53
A T + +LC + L +D +T ++A +KE + + E + W C
Sbjct: 23 AAASTEERFADLCKSKLGLDESTTRQAMQLFKETKNILKSSVSSLGGGSPEEIERFWSAC 82
Query: 54 SLYVSCRKATVPTVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNK----CRKWAD-MRKLP 108
LY R + + R+ E V L +L+ K+++ F + C K A + L
Sbjct: 83 VLYCVSRLS-----KAGRSKEDGSVSLCQILRASKLNIVDFFKEMPQFCLKVAHVLTGLY 137
Query: 109 DS---FRSKIARLERNFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTST 165
S R ++ L+ N ++ Y ++E+F D N ++I+ ++
Sbjct: 138 GSDWEKRLELKELQANVVHLSLLSRHYKRAYQELFLSND-----GKCSGNSSELINQEAS 192
Query: 166 KVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPS 225
+ F W+LF+ + + DLV S + L++ ++ +V +LR+ D
Sbjct: 193 DYYRFGWLLFLALRIQTFSRFKDLVTSTNELVSVLAVLIIHV-PVRLRNFDIKD------ 245
Query: 226 NFLDSHFAPLDDPPC-IISILC-KHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSL 283
S+FA D +I+ LC K+H +E LS K L T ++D L
Sbjct: 246 ---SSYFAKKSDRGVSLIASLCEKYHT---------SEDELS----KALEKTNTLIMDVL 289
Query: 284 AWVSNSPLWKNIEDSGQEIPGCEQKLRGNI--EDLSA---ILEPENFDYNFKVVNKMYEE 338
+ C+Q I E L+ L+ ++ + ++ K YE
Sbjct: 290 K-----------KKPCPATSACQQDNLSFIDPEGLTVFKDFLQGDSLKSSLLILEKEYEN 338
Query: 339 YILSVGDFDERIF 351
I + G+ DER+F
Sbjct: 339 AINTKGELDERMF 351
>gi|407975536|ref|ZP_11156441.1| LysR family transcriptional regulator [Nitratireductor indicus
C115]
gi|407429164|gb|EKF41843.1| LysR family transcriptional regulator [Nitratireductor indicus
C115]
Length = 301
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 16/116 (13%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNS---PLWKNIEDSGQEIPGCEQKLRGNIE 314
V +E S+SR ++ LNL++ V ++LA + ++ PL+K E SG + LR I
Sbjct: 17 VYSERSISRAALR-LNLSQPAVSNALARLRHTVDDPLFKR-EGSGMVPTPRAKSLRDPIR 74
Query: 315 DLSAILE-----PENFDYNFKVVNKMYEEYILSVGDFDERIFLPKFQSF-DETAPG 364
+LE E FDY+ K E++++V D+ E + +P+F + E APG
Sbjct: 75 QALELLERGFRGDEEFDYS-----KSNREFVIAVEDYGETVLIPRFIDWLAEAAPG 125
>gi|312082219|ref|XP_003143354.1| hypothetical protein LOAG_07773 [Loa loa]
Length = 369
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 268 IVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCE 306
+VKHLN EE+VL+ AW +SPLW ++ ++P +
Sbjct: 1 MVKHLNKVEERVLEEFAWSLDSPLWPSLHRRADDVPSSQ 39
>gi|47222555|emb|CAG02920.1| unnamed protein product [Tetraodon nigroviridis]
Length = 581
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 25/154 (16%)
Query: 54 SLYVSCRKATVPTVNSNRTIEGNLVC--LTSLLKHCKMSLNQFLNKCRKW-ADMRKLPDS 110
SL+ SC A+V + ++ C LT LLK +++ +FL RK +M +
Sbjct: 11 SLWGSCLFASV--------TDMDIACFTLTQLLKAVSLNVKEFLALVRKLDVNMDTISTK 62
Query: 111 FRSKIARLERNFAVSKVIFTKYLPMFKEMFKPPD-----LDELLMHVRHNKKKMIHCTST 165
+ ++ LE+ + V ++ ++ K +F + L+ K+ + C
Sbjct: 63 VNAALSSLEKKYDVMLALYQRFEKTCKSVFASVSDNCRCKSDWLLSFSREKEIIRSC--- 119
Query: 166 KVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIAT 199
W +F+L K L + +DLV SF LL+ T
Sbjct: 120 ------WTMFLLAKGRALQMEDDLVISFQLLLCT 147
>gi|218883370|ref|YP_002427752.1| transcription initiation factor IIB [Desulfurococcus kamchatkensis
1221n]
gi|218764986|gb|ACL10385.1| Transcription initiation factor IIB (TFIIB) [Desulfurococcus
kamchatkensis 1221n]
Length = 319
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 13/93 (13%)
Query: 81 TSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIF----------- 129
T ++ + +L Q +N+ + +D+ LP + + AR+ RN AV K I
Sbjct: 122 TRIITSVERNLAQAMNELDRLSDILNLPSYVKEEAARIYRN-AVEKGIVRGRSIESIIAA 180
Query: 130 TKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHC 162
T YL +EM P LDE+ H R N+K++ C
Sbjct: 181 TIYLAC-REMKVPRSLDEITRHTRVNRKEIARC 212
>gi|90075834|dbj|BAE87597.1| unnamed protein product [Macaca fascicularis]
Length = 259
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 77/191 (40%), Gaps = 31/191 (16%)
Query: 16 LCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLH-----WLGCSLYVSCRKATVPTVNSN 70
LC L I + AW ++++S + G + W C + +P
Sbjct: 60 LCQKLKIPDHVRERAWLTWEKVSSVDGVLGGYIQKKKELWGICIFIAAVDLDEMP----- 114
Query: 71 RTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFT 130
T L K+ ++S+++F N + K+ ++ ++RL + + V +F+
Sbjct: 115 -------FTFTELQKNIEISVHKFFNLLEEIDTSTKVDNA----MSRLLKKYDVLFALFS 163
Query: 131 KYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLV 190
K EL+ + + ST V + +WI F+L K E L + +DLV
Sbjct: 164 KL----------ERTCELIYLTQPSSSISTEINSTLVLKVSWITFLLAKGEVLQMEDDLV 213
Query: 191 NSFHLLIATCD 201
SF L++ D
Sbjct: 214 ISFQLMLCVLD 224
>gi|390937904|ref|YP_006401642.1| transcription factor TFIIB cyclin-related protein [Desulfurococcus
fermentans DSM 16532]
gi|390191011|gb|AFL66067.1| Transcription factor TFIIB cyclin-related protein [Desulfurococcus
fermentans DSM 16532]
Length = 319
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 13/93 (13%)
Query: 81 TSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIF----------- 129
T ++ + +L Q +N+ + +D+ LP + + AR+ RN AV K I
Sbjct: 122 TRIITSVERNLAQAMNELDRLSDILNLPSYVKEEAARIYRN-AVEKGIVRGRSIESIIAA 180
Query: 130 TKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHC 162
T YL +EM P LDE+ H R N+K++ C
Sbjct: 181 TIYLAC-REMKVPRSLDEITRHTRVNRKEIARC 212
>gi|168035668|ref|XP_001770331.1| Rb -related protein [Physcomitrella patens subsp. patens]
gi|254789788|sp|A9SVH7.1|RBR_PHYPA RecName: Full=Retinoblastoma-related protein
gi|162678362|gb|EDQ64821.1| Rb -related protein [Physcomitrella patens subsp. patens]
Length = 1116
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 79/383 (20%), Positives = 146/383 (38%), Gaps = 86/383 (22%)
Query: 18 MALNIDSTTAKEAWNAYKEMS----------HHYTLEGSQLHWLGCSLYVSCRKATVPTV 67
+ L +D T ++A +KE T+E ++ W GC LYV + TV
Sbjct: 97 VGLCLDDPTLQQALRLFKESKPLLLANIDSIGTSTVEDTERLWGGCVLYVVKALSCGATV 156
Query: 68 NSNRTIEGNLV--CLTSLLKHCKMSLNQFLNK---CRKWADMRKLPDSF----------- 111
+ +++ E N V L+ L++ K+ + L+ C + +LP
Sbjct: 157 DGDKS-ESNAVGFTLSQLMRQTKIRHARELDMISICAITECLLELPHFLVKVGPIVKQMY 215
Query: 112 ------RSKIARLERNFAVSKVIFTKYLPMFKEMFKPPD-----LDELLMHVRHNKKKMI 160
R ++ ++ NF +FT + ++++ F PD + L VR +
Sbjct: 216 GDEWEKRLQVKEVQANFVHLTALFTYFKRVYQDFFLSPDTFTNIVSRSLSGVRDEHHVSV 275
Query: 161 HCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIAT--CDLIYANVIQSKLRDIVNP 218
H +F W+LF+ + + +DLV + L+A C+ + +S L
Sbjct: 276 H------MQFGWMLFLALRMHVIQQFSDLVTCTNALMAVMFCEPLSGAWSKSNLGFC--- 326
Query: 219 DFEGMPSNFLDSHFAP------LDDPPCIISILCKHHDGCKLCVIVRAEASLSRDIVKHL 272
F L H P L DP V +S D+V L
Sbjct: 327 -FFVFMQVILILHMPPDLRKFSLQDP-----------------VRFAKRSSEGVDLVASL 368
Query: 273 NLT---EEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIEDLSAILEPENFDYNF 329
T ++ + SL +N+ + K + ++G + L +++ ++ N
Sbjct: 369 CATYYAADEDVSSLLEKANATISKLF----------GKPMKGGLAYLEGLMDKKSLAANL 418
Query: 330 KVVNKMYEEYILSVGDFDERIFL 352
+++ K YE+ S G DER+F+
Sbjct: 419 RMLEKDYEDSYQSRGGLDERMFI 441
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 27/38 (71%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNI 295
VR E +L R++ +HLN EE++L+S+AW S ++ ++
Sbjct: 698 VRHEETLPRELKRHLNTIEERILESMAWEKGSSMYNSL 735
>gi|426375441|ref|XP_004054547.1| PREDICTED: retinoblastoma-associated protein-like [Gorilla gorilla
gorilla]
Length = 645
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 97/250 (38%), Gaps = 42/250 (16%)
Query: 16 LCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLH-----WLGCSLYVSCRKATVPTVNSN 70
LC L I + AW ++++S + G + W C + +P
Sbjct: 137 LCQKLKIPDHVRERAWLTWEKVSSVDGVLGGYIQKKKELWGICIFIAAVDLDEMP----- 191
Query: 71 RTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFT 130
T L K+ ++S+++F N ++ K+ ++ ++RL + + V +F+
Sbjct: 192 -------FTFTELQKNIEISVHKFFNLLKEIDTSTKVDNA----MSRLLKKYDVLFALFS 240
Query: 131 KYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLV 190
K E + + + S V + +WI F+L K E L + +DLV
Sbjct: 241 KL----------ERTCEFIYLTQPSSSISTEINSALVLKVSWITFLLAKGEVLQMEDDLV 290
Query: 191 NSFHLLIATCD----LIYANVIQSKLRDIVNPDFEGMP------SNFLDSHFAPLDDPPC 240
SF L++ D L +++ + V P G P N L++
Sbjct: 291 ISFQLMLCVLDYFIKLSPPMLLKEPYKTAVIP-INGSPRTPRRGQNRSARIAKQLENDTR 349
Query: 241 IISILCKHHD 250
II +LCK H+
Sbjct: 350 IIEVLCKEHE 359
Score = 38.1 bits (87), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 239 PCIISIL-CKHHDGCKLC-VIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNS 289
P I+++L K D K+ ++AE +L+R+++KHL E ++++SLAW+S S
Sbjct: 592 PWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAWLSVS 644
>gi|384254177|gb|EIE27651.1| hypothetical protein COCSUDRAFT_55641 [Coccomyxa subellipsoidea
C-169]
Length = 1179
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 68/159 (42%), Gaps = 29/159 (18%)
Query: 78 VCLTSLLKHCKMSLNQFLNKC-----RKWADMRKL-----PDSFRSKIARLERNFAVSKV 127
+ LT +L +SL FL + + + KL P R ++ L+ +F + V
Sbjct: 89 ITLTKILDSFGISLADFLKELPVVVKKAEPSLSKLLGPISPMERRLRLRELQTSFVYTTV 148
Query: 128 IFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTS-TKVFEFTWILFVLTKAEYLDVS 186
+ K +F++ FK P C S VF W LF++ KA+
Sbjct: 149 LAKKCRDLFQQYFKLP---------------TSGCYSEPSVFHLVWQLFIVAKAKLFPPF 193
Query: 187 NDLVNSFHLLIATCDLIYANV-IQSKLRDIVNPDFEGMP 224
DLV SF+LLI C L +A + ++ R + D E +P
Sbjct: 194 PDLVASFNLLI--CVLAFAFCHVPAEQRSVQLTDTERLP 230
>gi|432852990|ref|XP_004067486.1| PREDICTED: retinoblastoma-like protein 2-like, partial [Oryzias
latipes]
Length = 365
Score = 41.2 bits (95), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 268 IVKHLNLTEEQVLDSLAWVSNSPLWKNIEDSGQEIPGCEQ 307
+ K L+ ++Q+L+SLAW +SPLW+ I+ +G P +Q
Sbjct: 151 VCKSLSQVKQQILESLAWTGDSPLWEEIQANGGRFPLIQQ 190
>gi|357152101|ref|XP_003576010.1| PREDICTED: retinoblastoma-related protein 2-like [Brachypodium
distachyon]
Length = 878
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNI 295
VR E SL R++ +HLN EEQ+L+S+AW S L+ ++
Sbjct: 451 VRHEESLPRELKRHLNALEEQLLESMAWEKGSSLYNSL 488
>gi|1666661|emb|CAA70428.1| retinoblastoma protein [Notophthalmus viridescens]
Length = 899
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 29/38 (76%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNI 295
++ E SL+R+++KHL E ++++SLAW S SP+++ I
Sbjct: 511 IKDEPSLTREMIKHLESCEHRIMESLAWRSESPIYELI 548
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 12/121 (9%)
Query: 79 CLTSLLKHCKMSLNQFLNKCRKW-ADMRKLPDSFRSKIARLERNFAVSKVIFTKYLPMFK 137
+T LLK +++N F ++ M + + + RL+ + ++ K+ +F+
Sbjct: 90 TITELLKSTHLNVNMFTGYIKEMDISMDTITTKVNNAVTRLKTKYNTLCTLYQKFQRLFE 149
Query: 138 EMF-KPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLVNSFHLL 196
+F K P N + + +F+ WI F+L K L + +DLV SF LL
Sbjct: 150 LIFIKEPS----------NVQISSDISPAALFKILWITFLLVKGSVLQMEDDLVISFQLL 199
Query: 197 I 197
+
Sbjct: 200 L 200
>gi|268306346|gb|ACY95294.1| retinoblastoma-related protein [Hordeum vulgare subsp. vulgare]
Length = 975
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNI 295
VR E SL R++ +HLN EEQ+L+S+AW S L+ ++
Sbjct: 548 VRHEESLPRELKRHLNSLEEQLLESMAWEKGSSLYNSL 585
>gi|326510877|dbj|BAJ91786.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510927|dbj|BAJ91811.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 970
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNI 295
VR E SL R++ +HLN EEQ+L+S+AW S L+ ++
Sbjct: 543 VRHEESLPRELKRHLNSLEEQLLESMAWEKGSSLYNSL 580
>gi|268306348|gb|ACY95295.1| retinoblastoma-related protein [Hordeum vulgare subsp. vulgare]
Length = 885
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNI 295
VR E SL R++ +HLN EEQ+L+S+AW S L+ ++
Sbjct: 548 VRHEESLPRELKRHLNSLEEQLLESMAWEKGSSLYNSL 585
>gi|413925018|gb|AFW64950.1| retinoblastoma protein 2 [Zea mays]
Length = 866
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNI 295
VR E +L R++ +HLN EEQ+L+S+AW S L+ ++
Sbjct: 438 VRHEETLPRELKRHLNSLEEQILESMAWEKGSSLYNSL 475
>gi|413925017|gb|AFW64949.1| hypothetical protein ZEAMMB73_472172 [Zea mays]
Length = 839
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNI 295
VR E +L R++ +HLN EEQ+L+S+AW S L+ ++
Sbjct: 438 VRHEETLPRELKRHLNSLEEQILESMAWEKGSSLYNSL 475
>gi|75244560|sp|Q8H0J6.1|RBR2_MAIZE RecName: Full=Retinoblastoma-related protein 2; Short=ZmRBR2
gi|24561941|emb|CAC82493.1| retinoblastoma-related protein [Zea mays]
Length = 866
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNI 295
VR E +L R++ +HLN EEQ+L+S+AW S L+ ++
Sbjct: 438 VRHEETLPRELKRHLNSLEEQILESMAWEKGSSLYNSL 475
>gi|2352799|gb|AAB69651.1| retinoblastoma-related protein 2b [Zea mays]
Length = 584
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNI 295
VR E +L R++ +HLN EEQ+L+S+AW S L+ ++
Sbjct: 183 VRHEETLPRELKRHLNSLEEQILESMAWEKGSSLYNSL 220
>gi|47191468|emb|CAF92871.1| unnamed protein product [Tetraodon nigroviridis]
Length = 44
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Query: 185 VSNDLVNSFHLLIATCDLIYANVIQSKLR-DIVNPDFEG 222
+S+DLVNS+HLL+ DL++ N + R +++NP+F+G
Sbjct: 5 ISDDLVNSYHLLLCALDLVFTNALLCNARKELLNPNFKG 43
>gi|405951748|gb|EKC19634.1| Retinoblastoma-associated protein [Crassostrea gigas]
Length = 859
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 239 PCIISILCKH-HDGCK-LCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNIE 296
P II H +D K L ++AE L+++IVKHL E+++L+ LAW SP+++ +
Sbjct: 431 PWIIQTFGLHCYDFFKVLESFIKAEPILTKEIVKHLQNLEKRILEELAWTPESPVFEALS 490
Query: 297 DS 298
S
Sbjct: 491 KS 492
>gi|9716502|gb|AAF97520.1|AF250050_1 retinoblastoma related protein RBR1 [Zea mays]
Length = 867
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNI 295
VR E +L R++ +HLN EEQ+L+S+AW S L+ ++
Sbjct: 439 VRHEETLPRELKRHLNSLEEQLLESMAWEKGSSLYNSL 476
>gi|162462832|ref|NP_001104876.1| retinoblastoma-related protein 1 [Zea mays]
gi|2352795|gb|AAB69649.1| retinoblastoma-related protein 1 [Zea mays]
gi|414591487|tpg|DAA42058.1| TPA: retinoblastoma1 [Zea mays]
Length = 866
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNI 295
VR E +L R++ +HLN EEQ+L+S+AW S L+ ++
Sbjct: 438 VRHEETLPRELKRHLNSLEEQLLESMAWEKGSSLYNSL 475
>gi|189039668|sp|Q9LKX9.2|RBR1_MAIZE RecName: Full=Retinoblastoma-related protein 1; Short=Rb1;
Short=ZmRBR1
gi|414591488|tpg|DAA42059.1| TPA: retinoblastoma1 [Zea mays]
Length = 867
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNI 295
VR E +L R++ +HLN EEQ+L+S+AW S L+ ++
Sbjct: 439 VRHEETLPRELKRHLNSLEEQLLESMAWEKGSSLYNSL 476
>gi|1617474|emb|CAA67422.1| Rb1 protein [Zea mays]
Length = 683
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNI 295
VR E +L R++ +HLN EEQ+L+S+AW S L+ ++
Sbjct: 255 VRHEETLPRELKRHLNSLEEQLLESMAWEKGSSLYNSL 292
>gi|18426918|gb|AAA98478.2| retinoblastoma-like protein [Zea mays]
Length = 527
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNI 295
VR E +L R++ +HLN EEQ+L+S+AW S L+ ++
Sbjct: 99 VRHEETLPRELKRHLNSLEEQLLESMAWEKGSSLYNSL 136
>gi|1314631|gb|AAC50479.1| pRb2/p130, partial [Homo sapiens]
Length = 80
Score = 39.3 bits (90), Expect = 3.9, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 8 ETAHQHQELCMALNIDSTTAKEAWNAYKEMSHHYTLE 44
+ + ELC LN+D EAW++Y+ MS YTLE
Sbjct: 44 QIQQRFDELCSRLNMDEAARPEAWDSYRSMSESYTLE 80
>gi|145354724|ref|XP_001421627.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581865|gb|ABO99920.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 1002
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLW---KNIEDSGQEIPGCEQKLRGN 312
VRA+ S+ R+I +H N EE+ L+ LAW S L+ K +S + G L G
Sbjct: 580 VRADMSMPREIQRHFNSLEEKTLERLAWCKGSTLFEFLKTFHESARGSGGASTALPGR 637
>gi|302845871|ref|XP_002954473.1| retinoblastoma-like protein [Volvox carteri f. nagariensis]
gi|300260145|gb|EFJ44366.1| retinoblastoma-like protein [Volvox carteri f. nagariensis]
Length = 1132
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 266 RDIVKHLNLTEEQVLDSLAWVSNSPLWKNI 295
RD+ +HL L EE++L+SLAW ++SPL+ I
Sbjct: 638 RDLKRHLFLVEEKILESLAWEADSPLYSLI 667
>gi|162461964|ref|NP_001105822.1| retinoblastoma-related protein 3 [Zea mays]
gi|122239408|sp|Q3LXA7.1|RBR3_MAIZE RecName: Full=Retinoblastoma-related protein 3; Short=ZmRBR3
gi|74099767|gb|AAZ99092.1| retinoblastoma-related 3 [Zea mays]
gi|414869737|tpg|DAA48294.1| TPA: retinoblastoma protein 3 [Zea mays]
Length = 1010
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 149/376 (39%), Gaps = 70/376 (18%)
Query: 2 GQLADNETAHQHQELCMA-LNIDSTTAKEAWNAYKEMSH----------HYTLEGSQLHW 50
+A + +LC A L +D +T ++A KE ++ + E + W
Sbjct: 19 ASVAAASIEERFADLCKAKLGLDESTTRQAMQLLKETNNILKSSMSSLGGGSPEEIERFW 78
Query: 51 LGCSLYVSCRKATVPTVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNK----CRKWAD-MR 105
C LY R + + R+ E V L +L+ K+++ F + C K A +
Sbjct: 79 SACVLYCVSRLS-----KAGRSKEDGSVSLCQILRASKLNIVDFFKEMPQFCIKVAHILT 133
Query: 106 KLPDS---FRSKIARLERNFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHC 162
L S R ++ L+ N ++ + Y ++E+F D N ++
Sbjct: 134 GLYGSDWEKRLELKELQANVVHLSLLSSYYKRAYQELFLSNDGKSSDNSSESNNQE---- 189
Query: 163 TSTKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCDLIYANV-IQSKLRDIVNPDFE 221
++ + F W+LF++ + + DLV S + L++ ++ +V ++ + DI + +
Sbjct: 190 -ASDYYRFGWLLFLVLRIQTFSRFKDLVTSTNELVSVLAVLIIHVPVRLRNFDIKDSSYF 248
Query: 222 GMPSNFLDSHFAPLDDPPCIISILC-KHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVL 280
G S D +I+ LC KHH +E LS K L T ++
Sbjct: 249 GKKS----------DRGVSLIASLCEKHHT---------SEDELS----KALEKTNTLIM 285
Query: 281 DSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNI--EDLSA---ILEPENFDYNFKVVNKM 335
D L + C+Q I E L+ +L+ ++ + ++ K
Sbjct: 286 DILK-----------KKPCPATSACQQDNLSFIDPEGLTVFKDLLQGDSLKPSLIILEKE 334
Query: 336 YEEYILSVGDFDERIF 351
YE I + G+ DER+F
Sbjct: 335 YENAINTKGELDERMF 350
>gi|414869735|tpg|DAA48292.1| TPA: hypothetical protein ZEAMMB73_291588 [Zea mays]
Length = 1009
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 149/376 (39%), Gaps = 70/376 (18%)
Query: 2 GQLADNETAHQHQELCMA-LNIDSTTAKEAWNAYKEMSH----------HYTLEGSQLHW 50
+A + +LC A L +D +T ++A KE ++ + E + W
Sbjct: 19 ASVAAASIEERFADLCKAKLGLDESTTRQAMQLLKETNNILKSSMSSLGGGSPEEIERFW 78
Query: 51 LGCSLYVSCRKATVPTVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNK----CRKWAD-MR 105
C LY R + + R+ E V L +L+ K+++ F + C K A +
Sbjct: 79 SACVLYCVSRLS-----KAGRSKEDGSVSLCQILRASKLNIVDFFKEMPQFCIKVAHILT 133
Query: 106 KLPDS---FRSKIARLERNFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHC 162
L S R ++ L+ N ++ + Y ++E+F D N ++
Sbjct: 134 GLYGSDWEKRLELKELQANVVHLSLLSSYYKRAYQELFLSNDGKSSDNSSESNNQE---- 189
Query: 163 TSTKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCDLIYANV-IQSKLRDIVNPDFE 221
++ + F W+LF++ + + DLV S + L++ ++ +V ++ + DI + +
Sbjct: 190 -ASDYYRFGWLLFLVLRIQTFSRFKDLVTSTNELVSVLAVLIIHVPVRLRNFDIKDSSYF 248
Query: 222 GMPSNFLDSHFAPLDDPPCIISILC-KHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVL 280
G S D +I+ LC KHH +E LS K L T ++
Sbjct: 249 GKKS----------DRGVSLIASLCEKHHT---------SEDELS----KALEKTNTLIM 285
Query: 281 DSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNI--EDLSA---ILEPENFDYNFKVVNKM 335
D L + C+Q I E L+ +L+ ++ + ++ K
Sbjct: 286 DILK-----------KKPCPATSACQQDNLSFIDPEGLTVFKDLLQGDSLKPSLIILEKE 334
Query: 336 YEEYILSVGDFDERIF 351
YE I + G+ DER+F
Sbjct: 335 YENAINTKGELDERMF 350
>gi|414869736|tpg|DAA48293.1| TPA: hypothetical protein ZEAMMB73_291588 [Zea mays]
Length = 980
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 149/376 (39%), Gaps = 70/376 (18%)
Query: 2 GQLADNETAHQHQELCMA-LNIDSTTAKEAWNAYKEMSH----------HYTLEGSQLHW 50
+A + +LC A L +D +T ++A KE ++ + E + W
Sbjct: 19 ASVAAASIEERFADLCKAKLGLDESTTRQAMQLLKETNNILKSSMSSLGGGSPEEIERFW 78
Query: 51 LGCSLYVSCRKATVPTVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNK----CRKWAD-MR 105
C LY R + + R+ E V L +L+ K+++ F + C K A +
Sbjct: 79 SACVLYCVSRLS-----KAGRSKEDGSVSLCQILRASKLNIVDFFKEMPQFCIKVAHILT 133
Query: 106 KLPDS---FRSKIARLERNFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHC 162
L S R ++ L+ N ++ + Y ++E+F D N ++
Sbjct: 134 GLYGSDWEKRLELKELQANVVHLSLLSSYYKRAYQELFLSNDGKSSDNSSESNNQE---- 189
Query: 163 TSTKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCDLIYANV-IQSKLRDIVNPDFE 221
++ + F W+LF++ + + DLV S + L++ ++ +V ++ + DI + +
Sbjct: 190 -ASDYYRFGWLLFLVLRIQTFSRFKDLVTSTNELVSVLAVLIIHVPVRLRNFDIKDSSYF 248
Query: 222 GMPSNFLDSHFAPLDDPPCIISILC-KHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVL 280
G S D +I+ LC KHH +E LS K L T ++
Sbjct: 249 GKKS----------DRGVSLIASLCEKHHT---------SEDELS----KALEKTNTLIM 285
Query: 281 DSLAWVSNSPLWKNIEDSGQEIPGCEQKLRGNI--EDLSA---ILEPENFDYNFKVVNKM 335
D L + C+Q I E L+ +L+ ++ + ++ K
Sbjct: 286 DILK-----------KKPCPATSACQQDNLSFIDPEGLTVFKDLLQGDSLKPSLIILEKE 334
Query: 336 YEEYILSVGDFDERIF 351
YE I + G+ DER+F
Sbjct: 335 YENAINTKGELDERMF 350
>gi|449487265|ref|XP_004157544.1| PREDICTED: retinoblastoma-related protein-like [Cucumis sativus]
Length = 1125
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 76/392 (19%), Positives = 145/392 (36%), Gaps = 72/392 (18%)
Query: 6 DNETAHQHQELCM-ALNIDSTTAKEAWNAYKEMSHHYTL----------EGSQLHWLGCS 54
D Q LC L++D +A+ ++E H E ++ W
Sbjct: 123 DTAADLQFSVLCQHGLHLDENCCNQAFKLFRETKHLLGANISAIGSGIPEEAERFWSAFV 182
Query: 55 LYVSCRKATVPTVNSNRTIEGNLVCLTSLLKHCKMSLNQFLNKCRKW--------ADMRK 106
LY R + +S++ E N L +L+ CK+++ +F + ++ +++
Sbjct: 183 LYSVKRLRDKNSESSHQGSENNSFTLCHILRVCKLNIVEFFKELPQFVVKAGPVLSNLYG 242
Query: 107 LPDSFRSKIARLERNFAVSKVIFTKYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTS-- 164
R + L+ NF ++ Y +++E F D + K+ I C +
Sbjct: 243 ADWENRLEAKELQANFVHLSLLSKYYKRVYREFFSTNDANV-------EKQSAISCPTGY 295
Query: 165 -TKVFEFTWILFVLTKAEYLDVSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGM 223
+ F W+LF+ + DLV + L++ ++ +V R+
Sbjct: 296 LSDYHRFGWLLFLALRVHAFSRFKDLVTCTNGLVSILAILILHV-PVHFRNF-------- 346
Query: 224 PSNFLDSHFAPLDDPPCIISILCKHHDGC----KLCVIVRAEASLSRDIVKHLNLTEEQV 279
N LDS ++ K G LC + R++++ N E +
Sbjct: 347 --NILDSE-----------RLVKKGGKGVDLLGSLCDVYDTSEEELREVMEKANGLIEDI 393
Query: 280 LDS---LAWVSNSPLWKNIEDSGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMY 336
L LA NS +NI+ G + ++E + N +++ K Y
Sbjct: 394 LKKKPRLASECNSKSLENIDTEG-------------LIYFEGLMEEPSLSANLEILEKDY 440
Query: 337 EEYILSVGD-FDERIFLPKFQSFDETAPGSSG 367
E+ I + G+ DER+F+ S + S+G
Sbjct: 441 EDAIHNKGEQLDERVFVNDEDSLLGSGSLSAG 472
>gi|55978008|gb|AAV68604.1| retinoblastoma protein [Ostreococcus tauri]
Length = 987
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLW 292
VRA+ L R+IV+H N EE+ L+ LAW S L+
Sbjct: 574 VRADMDLPREIVRHFNSLEEKTLERLAWCKGSALF 608
>gi|348679406|gb|EGZ19222.1| hypothetical protein PHYSODRAFT_354183 [Phytophthora sojae]
Length = 1073
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 7 NETAHQHQELCMALNIDSTTAKEAWNAYKE--MSHHYTLEGSQLHWLG-CSLYVSCRKAT 63
+ A + +LC L +DST + W A KE SHHY L L + C++Y C+ +
Sbjct: 763 SRAASRIYQLCNLLGLDSTDQNQIWTAVKECITSHHYLLRDRHLDLIVLCNIYAVCKVSR 822
Query: 64 VPTVN 68
P V+
Sbjct: 823 GPNVS 827
>gi|308812744|ref|XP_003083679.1| retinoblastoma protein (IC) [Ostreococcus tauri]
gi|116055560|emb|CAL58228.1| retinoblastoma protein (IC) [Ostreococcus tauri]
Length = 962
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLW 292
VRA+ L R+IV+H N EE+ L+ LAW S L+
Sbjct: 549 VRADMDLPREIVRHFNSLEEKTLERLAWCKGSALF 583
>gi|218185868|gb|EEC68295.1| hypothetical protein OsI_36358 [Oryza sativa Indica Group]
Length = 978
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 27/38 (71%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNI 295
VR E +L R++ +HLN EEQ+L+S++W S L+ ++
Sbjct: 548 VRHEETLPRELKRHLNSLEEQLLESMSWEKGSSLYNSL 585
>gi|62956053|gb|AAY23369.1| retinoblastoma-related protein 2 [Oryza sativa]
Length = 978
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 27/38 (71%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNI 295
VR E +L R++ +HLN EEQ+L+S++W S L+ ++
Sbjct: 548 VRHEETLPRELKRHLNSLEEQLLESMSWEKGSSLYNSL 585
>gi|115485753|ref|NP_001068020.1| Os11g0533500 [Oryza sativa Japonica Group]
gi|122248791|sp|Q2R374.2|RBR2_ORYSJ RecName: Full=Retinoblastoma-related protein 2; Short=OsRBR2
gi|108864448|gb|ABA94065.2| retinoblastoma-related protein 1, putative, expressed [Oryza sativa
Japonica Group]
gi|113645242|dbj|BAF28383.1| Os11g0533500 [Oryza sativa Japonica Group]
gi|215694317|dbj|BAG89310.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222616086|gb|EEE52218.1| hypothetical protein OsJ_34123 [Oryza sativa Japonica Group]
Length = 978
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 27/38 (71%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNI 295
VR E +L R++ +HLN EEQ+L+S++W S L+ ++
Sbjct: 548 VRHEETLPRELKRHLNSLEEQLLESMSWEKGSSLYNSL 585
>gi|108864449|gb|ABA94066.2| retinoblastoma-related protein 1, putative, expressed [Oryza sativa
Japonica Group]
Length = 873
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 27/38 (71%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNI 295
VR E +L R++ +HLN EEQ+L+S++W S L+ ++
Sbjct: 548 VRHEETLPRELKRHLNSLEEQLLESMSWEKGSSLYNSL 585
>gi|224053236|ref|XP_002297730.1| hypothetical protein POPTRDRAFT_547794 [Populus trichocarpa]
gi|254789789|sp|B9GLX8.1|RBR_POPTR RecName: Full=Retinoblastoma-related protein
gi|222844988|gb|EEE82535.1| hypothetical protein POPTRDRAFT_547794 [Populus trichocarpa]
Length = 1035
Score = 38.1 bits (87), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 26/38 (68%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNI 295
+R E SL R++ +HLN EE++LDS+ W S L+ ++
Sbjct: 595 IRHEESLPRELRRHLNSLEERLLDSMVWEKGSSLYNSL 632
>gi|7381060|gb|AAF61377.1|AF133675_1 retinoblastoma-related protein 1 [Populus tremula x Populus
tremuloides]
Length = 1035
Score = 38.1 bits (87), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 26/38 (68%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNI 295
+R E SL R++ +HLN EE++LDS+ W S L+ ++
Sbjct: 595 IRHEESLPRELRRHLNSLEERLLDSMVWEKGSSLYNSL 632
>gi|254789785|sp|B1ABR6.1|RBR_HIEPI RecName: Full=Retinoblastoma-related protein
gi|167593883|gb|ABZ85628.1| retinoblastoma-related protein [Hieracium piloselloides]
Length = 1005
Score = 38.1 bits (87), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 48/242 (19%), Positives = 98/242 (40%), Gaps = 34/242 (14%)
Query: 112 RSKIARLERNFAVSKVIFTKYLPMFKEMFKPP-DLDELLMHVRHNKKKMIHCTSTKVFEF 170
R + L+ NF ++ Y FK +FKP D E V ++ + +C F
Sbjct: 144 RLQAKELQANFVHLSLLSKYYKRAFKTLFKPSHDNVEGQSAVANSADYISNC-----HRF 198
Query: 171 TWILFVLTKAEYLDVSNDLVNSFHLLIATCDLIYANVIQSKLRDIVNPDFEGMPSNFLDS 230
W+LF+ + DLV + L++ ++ + I ++ R+ D S
Sbjct: 199 GWLLFLALRVHAFSRFKDLVTCTNGLVSILAILIIH-IPARFRNFSMSD---------SS 248
Query: 231 HFAPLDDPPCIISILCKHHDGCKLCVIVRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSP 290
HF DD ++ +L LC + R + N+ E++L +++
Sbjct: 249 HFVKKDDK--VVDLLAS------LCNMYETSEDELRKTMVRTNIVVEEILKKDPSMASEC 300
Query: 291 LWKNIEDSGQEIPGCEQKLRGNIEDLSAILEPENFDYNFKVVNKMYEEYILSVGDFDERI 350
N+++ + ++ +LE ++ + ++ K Y++ +L G+ DER+
Sbjct: 301 TNGNLDNIDTD----------DLTYFQDLLEEQSLSSDLDILEKDYDDAMLLEGELDERL 350
Query: 351 FL 352
F+
Sbjct: 351 FI 352
>gi|166007124|pdb|2QDJ|A Chain A, Crystal Structure Of The Retinoblastoma Protein N-Domain
Provides Insight Into Tumor Suppression, Ligand
Interaction And Holoprotein Architecture
Length = 304
Score = 38.1 bits (87), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 97/250 (38%), Gaps = 42/250 (16%)
Query: 16 LCMALNIDSTTAKEAWNAYKEMSHHYTLEGSQLH-----WLGCSLYVSCRKATVPTVNSN 70
LC L I + AW ++++S + G + W G ++++
Sbjct: 9 LCQKLKIPDHVRERAWLTWEKVSSVDGVLGGYIQKKKELW-GICIFIAAVD--------- 58
Query: 71 RTIEGNLVCLTSLLKHCKMSLNQFLNKCRKWADMRKLPDSFRSKIARLERNFAVSKVIFT 130
++ T L K+ ++S+++F N ++ K+ ++ +RL + + V +F+
Sbjct: 59 --LDEXSFTFTELQKNIEISVHKFFNLLKEIDTSTKVDNA----XSRLLKKYDVLFALFS 112
Query: 131 KYLPMFKEMFKPPDLDELLMHVRHNKKKMIHCTSTKVFEFTWILFVLTKAEYLDVSNDLV 190
K EL+ + + S V + +WI F+L K E L +DLV
Sbjct: 113 KL----------ERTCELIYLTQPSSSISTEINSALVLKVSWITFLLAKGEVLQXEDDLV 162
Query: 191 NSFHLLIATCDLIYA----NVIQSKLRDIVNPDFEGMP------SNFLDSHFAPLDDPPC 240
SF L + D +++ + V P G P N L++
Sbjct: 163 ISFQLXLCVLDYFIKLSPPXLLKEPYKTAVIP-INGSPRTPRRGQNRSARIAKQLENDTR 221
Query: 241 IISILCKHHD 250
II +LCK H+
Sbjct: 222 IIEVLCKEHE 231
>gi|254789784|sp|A9UL13.1|RBR1_WHEAT RecName: Full=Retinoblastoma-related protein 1; Short=TaRBR1
gi|62956047|gb|AAY23366.1| retinoblastoma-related protein 1 [Triticum aestivum]
Length = 957
Score = 37.7 bits (86), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 27/38 (71%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNI 295
VR E SL R++ +HLN EE++L+S+AW S ++ ++
Sbjct: 532 VRHEDSLPRELKRHLNSLEERLLESMAWEKGSSMYNSL 569
>gi|357148663|ref|XP_003574849.1| PREDICTED: retinoblastoma-related protein 1-like [Brachypodium
distachyon]
Length = 1000
Score = 37.7 bits (86), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 27/38 (71%)
Query: 258 VRAEASLSRDIVKHLNLTEEQVLDSLAWVSNSPLWKNI 295
VR E +L R++ +HLN EE++L+SLAW S ++ ++
Sbjct: 555 VRHEDTLPRELKRHLNSLEERLLESLAWEKGSSMYNSL 592
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.137 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,690,518,544
Number of Sequences: 23463169
Number of extensions: 288498076
Number of successful extensions: 748341
Number of sequences better than 100.0: 364
Number of HSP's better than 100.0 without gapping: 329
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 746783
Number of HSP's gapped (non-prelim): 1047
length of query: 407
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 262
effective length of database: 8,957,035,862
effective search space: 2346743395844
effective search space used: 2346743395844
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 78 (34.7 bits)