Your job contains 1 sequence.
>psy9485
MAMTPRTPLTGRHYLSKRDLEYGNVTPVKTATQSISRLNLLCGRDPNPSPALTRIFEACN
KNPQPLIDSVLTNLGDKFTQHYSASGDTARDFAEKRLSVAVCLYYKLLESILADEQKKPA
YDFNVLLSLQIFHETLFACCIEIVIFCYNSNSFPWILSVLGIEPYHFYKVIEWLLTPNPE
VLGSNSGNEI
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy9485
(190 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
RGD|1595511 - symbol:Rbl1 "retinoblastoma-like 1 (p107)" ... 397 9.9e-36 1
UNIPROTKB|P28749 - symbol:RBL1 "Retinoblastoma-like prote... 393 2.7e-35 1
MGI|MGI:103300 - symbol:Rbl1 "retinoblastoma-like 1 (p107... 392 3.4e-35 1
UNIPROTKB|F1SEM0 - symbol:RBL1 "Uncharacterized protein" ... 392 3.4e-35 1
UNIPROTKB|E1BMR3 - symbol:RBL1 "Uncharacterized protein" ... 391 4.4e-35 1
UNIPROTKB|E2RQ78 - symbol:RBL1 "Uncharacterized protein" ... 389 7.2e-35 1
UNIPROTKB|F1PBK3 - symbol:RBL1 "Uncharacterized protein" ... 389 7.2e-35 1
ZFIN|ZDB-GENE-030131-8179 - symbol:rbl1 "retinoblastoma-l... 378 1.1e-33 1
UNIPROTKB|E1BQ59 - symbol:RBL1 "Uncharacterized protein" ... 369 9.8e-33 1
UNIPROTKB|H9KZ60 - symbol:RBL2 "Uncharacterized protein" ... 296 3.2e-26 1
UNIPROTKB|H9L1Q3 - symbol:RBL2 "Uncharacterized protein" ... 305 5.6e-26 1
UNIPROTKB|H9KZ75 - symbol:RBL2 "Uncharacterized protein" ... 305 6.0e-26 1
UNIPROTKB|B7Z913 - symbol:RBL2 "cDNA FLJ53278, highly sim... 298 6.7e-26 1
UNIPROTKB|F1NEZ1 - symbol:F1NEZ1 "Uncharacterized protein... 305 7.5e-26 1
UNIPROTKB|F5H837 - symbol:RBL2 "Retinoblastoma-like prote... 298 1.4e-25 1
UNIPROTKB|A5D7M0 - symbol:RBL2 "Uncharacterized protein" ... 299 3.4e-25 1
UNIPROTKB|Q08999 - symbol:RBL2 "Retinoblastoma-like prote... 298 4.3e-25 1
UNIPROTKB|E2RIG3 - symbol:RBL2 "Uncharacterized protein" ... 291 2.4e-24 1
MGI|MGI:105085 - symbol:Rbl2 "retinoblastoma-like 2" spec... 286 8.2e-24 1
RGD|3541 - symbol:Rbl2 "retinoblastoma-like 2" species:10... 286 8.2e-24 1
UNIPROTKB|O55081 - symbol:Rbl2 "Retinoblastoma-like prote... 286 8.2e-24 1
ZFIN|ZDB-GENE-040428-1 - symbol:rb1 "retinoblastoma 1" sp... 178 1.3e-17 2
UNIPROTKB|F1MD46 - symbol:RB1 "Uncharacterized protein" s... 225 2.0e-17 1
RGD|3540 - symbol:Rb1 "retinoblastoma 1" species:10116 "R... 223 3.2e-17 1
UNIPROTKB|E1BZL8 - symbol:RB1 "Retinoblastoma-associated ... 222 4.0e-17 1
UNIPROTKB|E1C0H8 - symbol:RB1 "Retinoblastoma-associated ... 222 4.0e-17 1
UNIPROTKB|Q90600 - symbol:RB1 "Retinoblastoma-associated ... 222 4.1e-17 1
UNIPROTKB|F1NAY1 - symbol:RB1 "Retinoblastoma-associated ... 222 4.4e-17 1
UNIPROTKB|F1RK14 - symbol:RB1 "Uncharacterized protein" s... 220 6.9e-17 1
MGI|MGI:97874 - symbol:Rb1 "retinoblastoma 1" species:100... 219 8.6e-17 1
UNIPROTKB|J9NU49 - symbol:RB1 "Uncharacterized protein" s... 218 1.1e-16 1
UNIPROTKB|Q9BDQ3 - symbol:RB1 "Retinoblastoma protein 1" ... 217 1.3e-16 1
UNIPROTKB|P06400 - symbol:RB1 "Retinoblastoma-associated ... 217 1.4e-16 1
UNIPROTKB|F1PQ32 - symbol:RB1 "Uncharacterized protein" s... 207 1.7e-15 1
UNIPROTKB|H0YE05 - symbol:RBL1 "Retinoblastoma-like prote... 177 1.3e-13 1
FB|FBgn0015799 - symbol:Rbf "Retinoblastoma-family protei... 181 8.8e-13 1
UNIPROTKB|F1NV90 - symbol:RB1 "Retinoblastoma-associated ... 166 3.7e-11 1
UNIPROTKB|F1NAY3 - symbol:RB1 "Retinoblastoma-associated ... 166 3.9e-11 1
DICTYBASE|DDB_G0290551 - symbol:rblA "retinoblastoma-like... 148 5.1e-09 1
UNIPROTKB|Q66WV0 - symbol:RBR1 "Retinoblastoma-related pr... 137 2.2e-07 1
TAIR|locus:2082194 - symbol:RBR1 "retinoblastoma-related ... 134 9.3e-07 1
WB|WBGene00003020 - symbol:lin-35 species:6239 "Caenorhab... 118 0.00017 1
UNIPROTKB|G5EDT1 - symbol:lin-35 "Synthetic multivulva pr... 118 0.00017 1
FB|FBgn0038390 - symbol:Rbf2 "Retinoblastoma-family prote... 116 0.00023 1
>RGD|1595511 [details] [associations]
symbol:Rbl1 "retinoblastoma-like 1 (p107)" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005667 "transcription factor complex"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0043550 "regulation of lipid kinase activity"
evidence=ISO] [GO:0051726 "regulation of cell cycle" evidence=IEA]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
RGD:1595511 GO:GO:0005634 GO:GO:0051726 Gene3D:1.10.472.10
InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954 InterPro:IPR024599
Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934 IPI:IPI00357966
IntAct:D3ZS62 Ensembl:ENSRNOT00000009528 UCSC:RGD:1595511
Uniprot:D3ZS62
Length = 1063
Score = 397 (144.8 bits), Expect = 9.9e-36, P = 9.9e-36
Identities = 82/178 (46%), Positives = 115/178 (64%)
Query: 2 AMTPRTPLTGRHYLSKRDLEYGNVTPVKTATQSISRL-NLLCGRDPNPSPALTRIFEACN 60
+ P TPLTGR YL +++ TPV +ATQS+SRL +++ G PS L IFE+C
Sbjct: 364 SFAPSTPLTGRRYLQEKEAV---TTPVASATQSVSRLQSIVAGLKSAPSEQLLTIFESCM 420
Query: 61 KNPQPLIDSVLTNLGDKFTQHYSASGDTAR----DFAEKRLSVAVCLYYKLLESILADEQ 116
+NP I ++ +G+ F QHY+ S D DFA RL +A LYYK+LE+I+ E
Sbjct: 421 RNPMGNIVKIVKGIGETFCQHYTQSTDKQPGSHIDFAVNRLKLAEILYYKILETIMVQET 480
Query: 117 KK-PAYDFNVLLSLQIFHETLFACCIEIVIFCYNS-NSFPWILSVLGIEPYHFYKVIE 172
++ D +VLL IFH +L ACC+EIV+F Y+S +FPWI+ VLG++P++FYKVIE
Sbjct: 481 RRLHGMDMSVLLEQDIFHRSLLACCLEIVLFAYSSPRTFPWIIDVLGLQPFYFYKVIE 538
>UNIPROTKB|P28749 [details] [associations]
symbol:RBL1 "Retinoblastoma-like protein 1" species:9606
"Homo sapiens" [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0043550 "regulation of lipid kinase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0000080 "G1 phase of mitotic cell cycle" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0007179
"transforming growth factor beta receptor signaling pathway"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=TAS] Reactome:REACT_71
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
EMBL:CH471077 Reactome:REACT_111102 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0045944 GO:GO:0016568
GO:GO:0005667 GO:GO:0000122 GO:GO:0051726 GO:GO:0007179
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0006367
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0000080 PDB:1H28 PDBsum:1H28 eggNOG:NOG296920 KO:K04681
InterPro:IPR024599 Pfam:PF11934 EMBL:L14812 EMBL:AK290380
EMBL:AL136172 EMBL:AL365505 EMBL:AL391114 EMBL:BC032247 EMBL:M74547
EMBL:S78664 IPI:IPI00005139 IPI:IPI00375494 PIR:A47319
RefSeq:NP_002886.2 RefSeq:NP_899662.1 UniGene:Hs.207745
ProteinModelPortal:P28749 SMR:P28749 DIP:DIP-148N IntAct:P28749
MINT:MINT-1353484 STRING:P28749 PhosphoSite:P28749 DMDM:90103515
PaxDb:P28749 PRIDE:P28749 DNASU:5933 Ensembl:ENST00000344359
Ensembl:ENST00000373664 GeneID:5933 KEGG:hsa:5933 UCSC:uc002xgi.3
UCSC:uc002xgj.1 CTD:5933 GeneCards:GC20M035624 H-InvDB:HIX0040570
HGNC:HGNC:9893 MIM:116957 neXtProt:NX_P28749 PharmGKB:PA34257
HOGENOM:HOG000273892 HOVERGEN:HBG017710 InParanoid:P28749
OMA:RRDMQPL OrthoDB:EOG4QZ7KB PhylomeDB:P28749
EvolutionaryTrace:P28749 GenomeRNAi:5933 NextBio:23126
ArrayExpress:P28749 Bgee:P28749 CleanEx:HS_RBL1
Genevestigator:P28749 GermOnline:ENSG00000080839 GO:GO:0043550
InterPro:IPR015030 Pfam:PF08934 Uniprot:P28749
Length = 1068
Score = 393 (143.4 bits), Expect = 2.7e-35, P = 2.7e-35
Identities = 81/178 (45%), Positives = 115/178 (64%)
Query: 2 AMTPRTPLTGRHYLSKRDLEYGNVTPVKTATQSISRL-NLLCGRDPNPSPALTRIFEACN 60
+ P TPLTGR YL +++ +TPV +ATQS+SRL +++ G PS L IFE+C
Sbjct: 364 SFAPSTPLTGRRYLREKEAV---ITPVASATQSVSRLQSIVAGLKNAPSDQLINIFESCV 420
Query: 61 KNPQPLIDSVLTNLGDKFTQHYSASGDTAR----DFAEKRLSVAVCLYYKLLESILADEQ 116
+NP I +L +G+ F QHY+ S D DFA RL +A LYYK+LE+++ E
Sbjct: 421 RNPVENIMKILKGIGETFCQHYTQSTDEQPGSHIDFAVNRLKLAEILYYKILETVMVQET 480
Query: 117 KK-PAYDFNVLLSLQIFHETLFACCIEIVIFCYNS-NSFPWILSVLGIEPYHFYKVIE 172
++ D +VLL IFH +L ACC+EIV+F Y+S +FPWI+ VL ++P++FYKVIE
Sbjct: 481 RRLHGMDMSVLLEQDIFHRSLMACCLEIVLFAYSSPRTFPWIIEVLNLQPFYFYKVIE 538
>MGI|MGI:103300 [details] [associations]
symbol:Rbl1 "retinoblastoma-like 1 (p107)" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005667 "transcription factor complex" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0043550 "regulation of lipid kinase
activity" evidence=ISO] [GO:0051726 "regulation of cell cycle"
evidence=IEA] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 MGI:MGI:103300 GO:GO:0006351 GO:GO:0016568
GO:GO:0005667 GO:GO:0000122 GO:GO:0007049 GO:GO:0051726
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
EMBL:AL669828 eggNOG:NOG296920 GeneTree:ENSGT00530000063235
KO:K04681 InterPro:IPR024599 Pfam:PF11934 CTD:5933
HOGENOM:HOG000273892 HOVERGEN:HBG017710 OMA:RRDMQPL
OrthoDB:EOG4QZ7KB GO:GO:0043550 InterPro:IPR015030 Pfam:PF08934
EMBL:U33320 EMBL:U27177 EMBL:U27178 EMBL:AK156055 IPI:IPI00137864
IPI:IPI00352179 PIR:I49328 RefSeq:NP_001132988.1 RefSeq:NP_035379.2
UniGene:Mm.244671 ProteinModelPortal:Q64701 SMR:Q64701
IntAct:Q64701 STRING:Q64701 PhosphoSite:Q64701 PaxDb:Q64701
PRIDE:Q64701 Ensembl:ENSMUST00000029170 GeneID:19650 KEGG:mmu:19650
UCSC:uc008nos.2 InParanoid:Q3U1D4 NextBio:296908 Bgee:Q64701
CleanEx:MM_RBL1 Genevestigator:Q64701 GermOnline:ENSMUSG00000027641
Uniprot:Q64701
Length = 1063
Score = 392 (143.0 bits), Expect = 3.4e-35, P = 3.4e-35
Identities = 81/178 (45%), Positives = 115/178 (64%)
Query: 2 AMTPRTPLTGRHYLSKRDLEYGNVTPVKTATQSISRL-NLLCGRDPNPSPALTRIFEACN 60
+ P TPLTGR YL +++ TPV +ATQS+SRL +++ G PS L IFE+C
Sbjct: 364 SFAPSTPLTGRRYLQEKEAV---TTPVASATQSVSRLQSIVAGLKSAPSEQLLNIFESCM 420
Query: 61 KNPQPLIDSVLTNLGDKFTQHYSASGDTAR----DFAEKRLSVAVCLYYKLLESILADEQ 116
+NP I ++ +G+ F QHY+ S D DFA RL +A LYYK+LE+I+ E
Sbjct: 421 RNPMGNIIKIVKGIGETFCQHYTQSTDKQPGSHIDFAVNRLKLAEILYYKILETIMVQET 480
Query: 117 KK-PAYDFNVLLSLQIFHETLFACCIEIVIFCYNS-NSFPWILSVLGIEPYHFYKVIE 172
++ D +VLL IFH++L ACC+EIV+F Y+S +FPWI+ VL ++P++FYKVIE
Sbjct: 481 RRLHGMDMSVLLEQDIFHKSLMACCLEIVLFAYSSPRTFPWIIEVLDLQPFYFYKVIE 538
>UNIPROTKB|F1SEM0 [details] [associations]
symbol:RBL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043550 "regulation of lipid kinase activity"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 GO:GO:0005667
GO:GO:0000122 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 GeneTree:ENSGT00530000063235
InterPro:IPR024599 Pfam:PF11934 OMA:RRDMQPL GO:GO:0043550
InterPro:IPR015030 Pfam:PF08934 EMBL:CU607009
Ensembl:ENSSSCT00000008022 Uniprot:F1SEM0
Length = 1069
Score = 392 (143.0 bits), Expect = 3.4e-35, P = 3.4e-35
Identities = 81/178 (45%), Positives = 114/178 (64%)
Query: 2 AMTPRTPLTGRHYLSKRDLEYGNVTPVKTATQSISRL-NLLCGRDPNPSPALTRIFEACN 60
+ P TPLTGR YL +++ +TPV +ATQS+SRL +++ G PS L IFE+C
Sbjct: 366 SFAPSTPLTGRRYLREKEAV---ITPVASATQSVSRLQSIVAGLKNAPSEQLINIFESCM 422
Query: 61 KNPQPLIDSVLTNLGDKFTQHYSASGDTAR----DFAEKRLSVAVCLYYKLLESILADEQ 116
+NP I ++ +G+ F QHY+ S D DFA RL +A LYYK+LE+I+ E
Sbjct: 423 RNPMENIMKIVKGIGEAFCQHYTQSTDEQPGSHIDFAVNRLKLAEILYYKILETIMVQET 482
Query: 117 KK-PAYDFNVLLSLQIFHETLFACCIEIVIFCYNS-NSFPWILSVLGIEPYHFYKVIE 172
++ D +VLL IFH +L ACC+EIV+F Y+S +FPWI+ VL + P++FYKVIE
Sbjct: 483 RRLHGMDMSVLLEQDIFHHSLMACCLEIVLFAYSSPRTFPWIIEVLNLRPFYFYKVIE 540
>UNIPROTKB|E1BMR3 [details] [associations]
symbol:RBL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043550 "regulation of lipid kinase activity"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 GO:GO:0005667
GO:GO:0000122 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 GeneTree:ENSGT00530000063235
KO:K04681 InterPro:IPR024599 Pfam:PF11934 CTD:5933 OMA:RRDMQPL
GO:GO:0043550 InterPro:IPR015030 Pfam:PF08934 EMBL:DAAA02036543
EMBL:DAAA02036542 EMBL:DAAA02036544 IPI:IPI00693192
RefSeq:NP_001179531.1 UniGene:Bt.26367 Ensembl:ENSBTAT00000015333
GeneID:524870 KEGG:bta:524870 NextBio:20874052 Uniprot:E1BMR3
Length = 1068
Score = 391 (142.7 bits), Expect = 4.4e-35, P = 4.4e-35
Identities = 80/178 (44%), Positives = 114/178 (64%)
Query: 2 AMTPRTPLTGRHYLSKRDLEYGNVTPVKTATQSISRL-NLLCGRDPNPSPALTRIFEACN 60
+ P TPLTGR YL +++ +TPV +ATQS+SRL +++ G PS L IFE+C
Sbjct: 364 SFAPSTPLTGRRYLREKEAV---ITPVASATQSVSRLQSIVAGLKNAPSEQLINIFESCM 420
Query: 61 KNPQPLIDSVLTNLGDKFTQHYSASGDTAR----DFAEKRLSVAVCLYYKLLESILADEQ 116
+NP I ++ +G+ F QHY+ S D DFA RL +A LYYK+LE+++ E
Sbjct: 421 RNPMENIMKIVKGIGETFCQHYTQSTDEQPGSHIDFAVNRLKLAEILYYKILETVMVQET 480
Query: 117 KK-PAYDFNVLLSLQIFHETLFACCIEIVIFCYNS-NSFPWILSVLGIEPYHFYKVIE 172
++ D +VLL IFH +L ACC+EIV+F Y+S +FPWI+ VL + P++FYKVIE
Sbjct: 481 RRLHGMDMSVLLEQDIFHHSLMACCLEIVLFAYSSPRTFPWIIEVLNLRPFYFYKVIE 538
>UNIPROTKB|E2RQ78 [details] [associations]
symbol:RBL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
GO:GO:0005634 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 GeneTree:ENSGT00530000063235
InterPro:IPR024599 Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934
EMBL:AAEX03013918 Ensembl:ENSCAFT00000013845 NextBio:20852741
Uniprot:E2RQ78
Length = 1068
Score = 389 (142.0 bits), Expect = 7.2e-35, P = 7.2e-35
Identities = 80/178 (44%), Positives = 114/178 (64%)
Query: 2 AMTPRTPLTGRHYLSKRDLEYGNVTPVKTATQSISRL-NLLCGRDPNPSPALTRIFEACN 60
+ P TPLTGR YL +++ +TPV +ATQS+SRL +++ G PS L IFE+C
Sbjct: 364 SFAPSTPLTGRRYLREKEAV---ITPVASATQSVSRLQSIVAGLKNAPSEQLINIFESCI 420
Query: 61 KNPQPLIDSVLTNLGDKFTQHYSASGDTAR----DFAEKRLSVAVCLYYKLLESILADEQ 116
+NP I ++ +G+ F QHY+ S D DFA RL +A LYYK+LE+++ E
Sbjct: 421 RNPMENIMKIVKGIGETFCQHYTQSTDEQPGSHIDFAINRLKLAEILYYKILETVMVQET 480
Query: 117 KK-PAYDFNVLLSLQIFHETLFACCIEIVIFCYNS-NSFPWILSVLGIEPYHFYKVIE 172
++ D +VLL IFH +L ACC+EIV+F Y+S +FPWI+ VL + P++FYKVIE
Sbjct: 481 RRLHGMDMSVLLEQDIFHRSLMACCLEIVLFAYSSPRTFPWIIEVLNLRPFYFYKVIE 538
>UNIPROTKB|F1PBK3 [details] [associations]
symbol:RBL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
GO:GO:0005634 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 GeneTree:ENSGT00530000063235
KO:K04681 InterPro:IPR024599 Pfam:PF11934 CTD:5933 OMA:RRDMQPL
InterPro:IPR015030 Pfam:PF08934 EMBL:AAEX03013918
RefSeq:XP_534412.2 ProteinModelPortal:F1PBK3
Ensembl:ENSCAFT00000013851 GeneID:477221 KEGG:cfa:477221
Uniprot:F1PBK3
Length = 1068
Score = 389 (142.0 bits), Expect = 7.2e-35, P = 7.2e-35
Identities = 80/178 (44%), Positives = 114/178 (64%)
Query: 2 AMTPRTPLTGRHYLSKRDLEYGNVTPVKTATQSISRL-NLLCGRDPNPSPALTRIFEACN 60
+ P TPLTGR YL +++ +TPV +ATQS+SRL +++ G PS L IFE+C
Sbjct: 364 SFAPSTPLTGRRYLREKEAV---ITPVASATQSVSRLQSIVAGLKNAPSEQLINIFESCI 420
Query: 61 KNPQPLIDSVLTNLGDKFTQHYSASGDTAR----DFAEKRLSVAVCLYYKLLESILADEQ 116
+NP I ++ +G+ F QHY+ S D DFA RL +A LYYK+LE+++ E
Sbjct: 421 RNPMENIMKIVKGIGETFCQHYTQSTDEQPGSHIDFAINRLKLAEILYYKILETVMVQET 480
Query: 117 KK-PAYDFNVLLSLQIFHETLFACCIEIVIFCYNS-NSFPWILSVLGIEPYHFYKVIE 172
++ D +VLL IFH +L ACC+EIV+F Y+S +FPWI+ VL + P++FYKVIE
Sbjct: 481 RRLHGMDMSVLLEQDIFHRSLMACCLEIVLFAYSSPRTFPWIIEVLNLRPFYFYKVIE 538
>ZFIN|ZDB-GENE-030131-8179 [details] [associations]
symbol:rbl1 "retinoblastoma-like 1 (p107)"
species:7955 "Danio rerio" [GO:0005634 "nucleus" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
ZFIN:ZDB-GENE-030131-8179 GO:GO:0005634 GO:GO:0051726
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GeneTree:ENSGT00530000063235 InterPro:IPR024599 Pfam:PF11934
OMA:RRDMQPL EMBL:BX936390 IPI:IPI00770273
Ensembl:ENSDART00000073865 ArrayExpress:F1QY31 Bgee:F1QY31
Uniprot:F1QY31
Length = 1058
Score = 378 (138.1 bits), Expect = 1.1e-33, P = 1.1e-33
Identities = 80/178 (44%), Positives = 118/178 (66%)
Query: 2 AMTPRTPLTGRHYLSKRDLEYGNVTPVKTATQSISRL-NLLCGRDPNPSPALTRIFEACN 60
++ P TPLTGR YL ++++ VTPV +ATQS+SRL +++ G PS AL +IF +C+
Sbjct: 365 SLAPSTPLTGRRYLKEKEVL---VTPVSSATQSVSRLQSMVSGLRNAPSDALLQIFISCS 421
Query: 61 KNPQPLIDSVLTNLGDKFTQHYSASGDTA----RDFAEKRLSVAVCLYYKLLESILADEQ 116
+NP I + + LG+KF Q Y+ D DFAEKRL +A LY+K+LE+++ E
Sbjct: 422 RNPTESILNRVKTLGEKFKQAYTNPTDDLPGAHMDFAEKRLKLAEILYFKILENVMTQEM 481
Query: 117 KK-PAYDFNVLLSLQIFHETLFACCIEIVIFCYNSN-SFPWILSVLGIEPYHFYKVIE 172
K+ D+ VLL ++ H +L ACC+E+V+F Y+S +FPWIL + I P++FYKVIE
Sbjct: 482 KRLQGKDWAVLLEQEVLHCSLLACCLEVVLFSYSSQRTFPWILEIFQIPPFYFYKVIE 539
>UNIPROTKB|E1BQ59 [details] [associations]
symbol:RBL1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0043550 "regulation of lipid kinase
activity" evidence=IEA] InterPro:IPR002719 InterPro:IPR002720
Pfam:PF01857 Pfam:PF01858 GO:GO:0005667 GO:GO:0000122 GO:GO:0051726
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GeneTree:ENSGT00530000063235 InterPro:IPR024599 Pfam:PF11934
OMA:RRDMQPL GO:GO:0043550 InterPro:IPR015030 Pfam:PF08934
EMBL:AADN02019534 EMBL:AADN02019535 IPI:IPI00588682
Ensembl:ENSGALT00000002032 Uniprot:E1BQ59
Length = 1064
Score = 369 (135.0 bits), Expect = 9.8e-33, P = 9.8e-33
Identities = 78/181 (43%), Positives = 112/181 (61%)
Query: 2 AMTPRTPLTGRHYLSKRDLEYGNVTPVKTATQSISRL-NLLCGRDPNPSPALTRIFEACN 60
+ P TPLTGR YL +++ +TPV +ATQS+SRL N++ G PS L IFE+C
Sbjct: 363 SFAPSTPLTGRRYLREKEAV---ITPVASATQSVSRLQNIVAGLKNAPSELLMAIFESCA 419
Query: 61 KNPQPLIDSVLTNLGDKFTQHYSASGDTAR----DFAEKRLSVAVCLYYKLLESILADEQ 116
+NP I + + +G+ F + Y+ D DFA RL +A LYYK+LE+I+ E
Sbjct: 420 RNPAESIVNRVREIGETFCRSYTQPTDELPGSHIDFAVNRLKLAEILYYKILETIMVQEM 479
Query: 117 KK-PAYDFNVLLSLQIFHETLFACCIEIVIFCYNS-NSFPWILSVLGIEPYHFYKVIEWL 174
++ D LL +FH +L ACC+EIV+F Y+S +FPWI+ VL + P++FYKVIE L
Sbjct: 480 RRLHGKDMTALLEQDVFHRSLMACCLEIVLFAYSSPRTFPWIIEVLDLRPFYFYKVIEVL 539
Query: 175 L 175
+
Sbjct: 540 I 540
>UNIPROTKB|H9KZ60 [details] [associations]
symbol:RBL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] InterPro:IPR002720 Pfam:PF01858
GO:GO:0005634 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SUPFAM:SSF47954 GeneTree:ENSGT00530000063235 InterPro:IPR024599
Pfam:PF11934 EMBL:AADN02043607 Ensembl:ENSGALT00000005059
Uniprot:H9KZ60
Length = 425
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 71/175 (40%), Positives = 100/175 (57%)
Query: 4 TPR--TPLTGRHYLSKRDLEYGNVTPVKTATQSISRLN-LLCGRDPNPSPALTRIFEACN 60
+PR TPLTGR Y+ K Y VTPV AT S+SRL+ +L G PS L +IF AC+
Sbjct: 251 SPRVTTPLTGRKYI-KESNPY--VTPVSIATYSLSRLHTMLAGLKNAPSENLEQIFRACS 307
Query: 61 KNPQPLIDSVLTNLGDKFTQHYSAS---GDTARDFAEKRLSVAVCLYYKLLESILADEQK 117
++P I S + + + + Q A + ++D A K A LYYK+LES++ E++
Sbjct: 308 RDPSQSIASRVKEMYEVYCQSMQAEEEFSNLSKDVASKHFRRAEVLYYKVLESVIEQERR 367
Query: 118 KPA-YDFNVLLSLQIFHETLFACCIEIVIFCYN-SNSFPWILSVLGIEPYHFYKV 170
+ D + +L +FH +L ACC+EIV F Y SFP+I + I YHFYKV
Sbjct: 368 RLGDTDLSAVLEQDVFHRSLLACCLEIVTFTYKLPGSFPFITEIFDIPVYHFYKV 422
>UNIPROTKB|H9L1Q3 [details] [associations]
symbol:RBL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] InterPro:IPR002719 InterPro:IPR002720
Pfam:PF01857 Pfam:PF01858 GO:GO:0005634 GO:GO:0051726
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GeneTree:ENSGT00530000063235 InterPro:IPR024599 Pfam:PF11934
EMBL:AADN02043607 Ensembl:ENSGALT00000035613 Uniprot:H9L1Q3
Length = 939
Score = 305 (112.4 bits), Expect = 5.6e-26, P = 5.6e-26
Identities = 73/177 (41%), Positives = 102/177 (57%)
Query: 4 TPR--TPLTGRHYLSKRDLEYGNVTPVKTATQSISRLN-LLCGRDPNPSPALTRIFEACN 60
+PR TPLTGR Y+ K Y VTPV AT S+SRL+ +L G PS L +IF AC+
Sbjct: 252 SPRVTTPLTGRKYI-KESNPY--VTPVSIATYSLSRLHTMLAGLKNAPSENLEQIFRACS 308
Query: 61 KNPQPLIDSVLTNLGDKFTQHYSAS---GDTARDFAEKRLSVAVCLYYKLLESILADEQK 117
++P I S + + + + Q A + ++D A K A LYYK+LES++ E++
Sbjct: 309 RDPSQSIASRVKEMYEVYCQSMQAEEEFSNLSKDVASKHFRRAEVLYYKVLESVIEQERR 368
Query: 118 KPA-YDFNVLLSLQIFHETLFACCIEIVIFCYN-SNSFPWILSVLGIEPYHFYKVIE 172
+ D + +L +FH +L ACC+EIV F Y SFP+I + I YHFYKVIE
Sbjct: 369 RLGDTDLSAVLEQDVFHRSLLACCLEIVTFTYKLPGSFPFITEIFDIPVYHFYKVIE 425
>UNIPROTKB|H9KZ75 [details] [associations]
symbol:RBL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] InterPro:IPR002719 InterPro:IPR002720
Pfam:PF01857 Pfam:PF01858 GO:GO:0005634 GO:GO:0051726
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GeneTree:ENSGT00530000063235 OMA:CCIDLIY InterPro:IPR024599
Pfam:PF11934 EMBL:AADN02043607 Ensembl:ENSGALT00000005807
Uniprot:H9KZ75
Length = 981
Score = 305 (112.4 bits), Expect = 6.0e-26, P = 6.0e-26
Identities = 73/177 (41%), Positives = 102/177 (57%)
Query: 4 TPR--TPLTGRHYLSKRDLEYGNVTPVKTATQSISRLN-LLCGRDPNPSPALTRIFEACN 60
+PR TPLTGR Y+ K Y VTPV AT S+SRL+ +L G PS L +IF AC+
Sbjct: 295 SPRVTTPLTGRKYI-KESNPY--VTPVSIATYSLSRLHTMLAGLKNAPSENLEQIFRACS 351
Query: 61 KNPQPLIDSVLTNLGDKFTQHYSAS---GDTARDFAEKRLSVAVCLYYKLLESILADEQK 117
++P I S + + + + Q A + ++D A K A LYYK+LES++ E++
Sbjct: 352 RDPSQSIASRVKEMYEVYCQSMQAEEEFSNLSKDVASKHFRRAEVLYYKVLESVIEQERR 411
Query: 118 KPA-YDFNVLLSLQIFHETLFACCIEIVIFCYN-SNSFPWILSVLGIEPYHFYKVIE 172
+ D + +L +FH +L ACC+EIV F Y SFP+I + I YHFYKVIE
Sbjct: 412 RLGDTDLSAVLEQDVFHRSLLACCLEIVTFTYKLPGSFPFITEIFDIPVYHFYKVIE 468
>UNIPROTKB|B7Z913 [details] [associations]
symbol:RBL2 "cDNA FLJ53278, highly similar to
Retinoblastoma-like protein 2" species:9606 "Homo sapiens"
[GO:0005634 "nucleus" evidence=IEA] [GO:0051726 "regulation of cell
cycle" evidence=IEA] InterPro:IPR002720 Pfam:PF01858 GO:GO:0005634
GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763 SUPFAM:SSF47954
UniGene:Hs.513609 HGNC:HGNC:9894 ChiTaRS:RBL2 EMBL:AC007342
EMBL:AK304283 IPI:IPI00922321 SMR:B7Z913 STRING:B7Z913
Ensembl:ENST00000544545 UCSC:uc010vgw.2 Uniprot:B7Z913
Length = 518
Score = 298 (110.0 bits), Expect = 6.7e-26, P = 6.7e-26
Identities = 68/177 (38%), Positives = 99/177 (55%)
Query: 2 AMTPRTPLTGRHYLSKRDLEYGNVTPVKTATQSISRLN-LLCGRDPNPSPALTRIFEACN 60
A+ TPLTG Y+ + VTPV TAT S+SRL+ +L G PS L +I C+
Sbjct: 180 ALRISTPLTGVRYIKENS---PCVTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCS 236
Query: 61 KNPQPLIDSVLTNLGDKFTQHYSASGD---TARDFAEKRLSVAVCLYYKLLESILADEQK 117
++P I + L + + ++QH+ D A++ A K A LYYK+LES++ EQK
Sbjct: 237 RDPTQAIANRLKEMFEIYSQHFQPDEDFSNCAKEIASKHFRFAEMLYYKVLESVIEQEQK 296
Query: 118 KPA-YDFNVLLSLQIFHETLFACCIEIVIFCYNS-NSFPWILSVLGIEPYHFYKVIE 172
+ D + +L FH +L ACC+E+V F Y +FP+I + + YHFYKVIE
Sbjct: 297 RLGDMDLSGILEQDAFHRSLLACCLEVVTFSYKPPGNFPFITEIFDVPLYHFYKVIE 353
>UNIPROTKB|F1NEZ1 [details] [associations]
symbol:F1NEZ1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] InterPro:IPR002720
Pfam:PF01858 GO:GO:0005634 GO:GO:0051726 Gene3D:1.10.472.10
InterPro:IPR013763 SUPFAM:SSF47954 GeneTree:ENSGT00530000063235
InterPro:IPR024599 Pfam:PF11934 EMBL:AADN02038292 EMBL:AADN02038287
EMBL:AADN02038288 EMBL:AADN02038289 EMBL:AADN02038290
EMBL:AADN02038291 IPI:IPI00820273 Ensembl:ENSGALT00000039692
Uniprot:F1NEZ1
Length = 1120
Score = 305 (112.4 bits), Expect = 7.5e-26, P = 7.5e-26
Identities = 73/177 (41%), Positives = 102/177 (57%)
Query: 4 TPR--TPLTGRHYLSKRDLEYGNVTPVKTATQSISRLN-LLCGRDPNPSPALTRIFEACN 60
+PR TPLTGR Y+ K Y VTPV AT S+SRL+ +L G PS L +IF AC+
Sbjct: 395 SPRVTTPLTGRKYI-KESNPY--VTPVSIATYSLSRLHTMLAGLKNAPSENLEQIFRACS 451
Query: 61 KNPQPLIDSVLTNLGDKFTQHYSAS---GDTARDFAEKRLSVAVCLYYKLLESILADEQK 117
++P I S + + + + Q A + ++D A K A LYYK+LES++ E++
Sbjct: 452 RDPSQSIASRVKEMYEVYCQSMQAEEEFSNLSKDVASKHFRRAEVLYYKVLESVIEQERR 511
Query: 118 KPA-YDFNVLLSLQIFHETLFACCIEIVIFCYN-SNSFPWILSVLGIEPYHFYKVIE 172
+ D + +L +FH +L ACC+EIV F Y SFP+I + I YHFYKVIE
Sbjct: 512 RLGDTDLSAVLEQDVFHRSLLACCLEIVTFTYKLPGSFPFITEIFDIPVYHFYKVIE 568
>UNIPROTKB|F5H837 [details] [associations]
symbol:RBL2 "Retinoblastoma-like protein 2" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] InterPro:IPR002720
Pfam:PF01858 GO:GO:0005634 GO:GO:0051726 Gene3D:1.10.472.10
InterPro:IPR013763 SUPFAM:SSF47954 InterPro:IPR024599 Pfam:PF11934
HGNC:HGNC:9894 ChiTaRS:RBL2 EMBL:AC007342 IPI:IPI01011272
Ensembl:ENST00000544405 ArrayExpress:F5H837 Bgee:F5H837
Uniprot:F5H837
Length = 639
Score = 298 (110.0 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 68/177 (38%), Positives = 99/177 (55%)
Query: 2 AMTPRTPLTGRHYLSKRDLEYGNVTPVKTATQSISRLN-LLCGRDPNPSPALTRIFEACN 60
A+ TPLTG Y+ + VTPV TAT S+SRL+ +L G PS L +I C+
Sbjct: 322 ALRISTPLTGVRYIKENS---PCVTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCS 378
Query: 61 KNPQPLIDSVLTNLGDKFTQHYSASGD---TARDFAEKRLSVAVCLYYKLLESILADEQK 117
++P I + L + + ++QH+ D A++ A K A LYYK+LES++ EQK
Sbjct: 379 RDPTQAIANRLKEMFEIYSQHFQPDEDFSNCAKEIASKHFRFAEMLYYKVLESVIEQEQK 438
Query: 118 KPA-YDFNVLLSLQIFHETLFACCIEIVIFCYNS-NSFPWILSVLGIEPYHFYKVIE 172
+ D + +L FH +L ACC+E+V F Y +FP+I + + YHFYKVIE
Sbjct: 439 RLGDMDLSGILEQDAFHRSLLACCLEVVTFSYKPPGNFPFITEIFDVPLYHFYKVIE 495
>UNIPROTKB|A5D7M0 [details] [associations]
symbol:RBL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043550 "regulation of lipid kinase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 GO:GO:0005737 GO:GO:0005730 GO:GO:0005667
GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 eggNOG:NOG296920 GeneTree:ENSGT00530000063235
InterPro:IPR024599 Pfam:PF11934 HOGENOM:HOG000273892
HOVERGEN:HBG017710 GO:GO:0043550 CTD:5934 KO:K16332 OMA:PPGNFPF
OrthoDB:EOG4PNXG9 EMBL:DAAA02046444 EMBL:BC140608 IPI:IPI00852473
RefSeq:NP_001091542.1 UniGene:Bt.17722 STRING:A5D7M0
Ensembl:ENSBTAT00000021613 GeneID:533294 KEGG:bta:533294
InParanoid:A5D7M0 NextBio:20875987 Uniprot:A5D7M0
Length = 1140
Score = 299 (110.3 bits), Expect = 3.4e-25, P = 3.4e-25
Identities = 69/177 (38%), Positives = 101/177 (57%)
Query: 2 AMTPRTPLTGRHYLSKRDLEYGNVTPVKTATQSISRLN-LLCGRDPNPSPALTRIFEACN 60
A+ TPLTG Y+ +D VTPV TAT S+SRL+ +L G PS L + +C+
Sbjct: 396 ALRVSTPLTGVRYI--KDSS-PCVTPVSTATHSLSRLHTMLTGLRNAPSERLEQTLRSCS 452
Query: 61 KNPQPLIDSVLTNLGDKFTQHYSASGD---TARDFAEKRLSVAVCLYYKLLESILADEQK 117
++P I + L + + ++QH+ + D A+D A K A LYYK+LES++ EQK
Sbjct: 453 RDPTQAIANRLKEMYEIYSQHFQSEEDGSNCAKDIASKHFRFAEMLYYKVLESVIEQEQK 512
Query: 118 KPA-YDFNVLLSLQIFHETLFACCIEIVIFCYNS-NSFPWILSVLGIEPYHFYKVIE 172
+ D + +L FH +L ACC+E+V F Y +FP+I + + YHFYKVIE
Sbjct: 513 RLGDMDLSGILEQDAFHRSLLACCLEVVTFSYKPPGNFPFITEIFDVPLYHFYKVIE 569
>UNIPROTKB|Q08999 [details] [associations]
symbol:RBL2 "Retinoblastoma-like protein 2" species:9606
"Homo sapiens" [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0043550 "regulation of lipid kinase
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000080 "G1 phase of mitotic cell cycle" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 GO:GO:0005737 Pathway_Interaction_DB:foxopathway
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0005730 GO:GO:0006355
GO:GO:0003677 GO:GO:0000785 GO:GO:0006351 GO:GO:0016568
GO:GO:0005667 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 GO:GO:0000080 eggNOG:NOG296920
InterPro:IPR024599 Pfam:PF11934 HOGENOM:HOG000273892
HOVERGEN:HBG017710 GO:GO:0043550 EMBL:X76061 EMBL:S67171
EMBL:X74594 EMBL:U53220 IPI:IPI00304028 PIR:A49370
RefSeq:NP_005602.3 UniGene:Hs.513609 ProteinModelPortal:Q08999
SMR:Q08999 DIP:DIP-425N IntAct:Q08999 MINT:MINT-102310
STRING:Q08999 PhosphoSite:Q08999 DMDM:116242746 PaxDb:Q08999
PRIDE:Q08999 DNASU:5934 Ensembl:ENST00000262133 GeneID:5934
KEGG:hsa:5934 UCSC:uc002ehi.4 CTD:5934 GeneCards:GC16P053467
HGNC:HGNC:9894 HPA:CAB016547 HPA:HPA019703 MIM:180203
neXtProt:NX_Q08999 PharmGKB:PA34258 InParanoid:Q08999 KO:K16332
OMA:PPGNFPF OrthoDB:EOG4PNXG9 PhylomeDB:Q08999 ChiTaRS:RBL2
GenomeRNAi:5934 NextBio:23132 ArrayExpress:Q08999 Bgee:Q08999
CleanEx:HS_RBL2 Genevestigator:Q08999 GermOnline:ENSG00000103479
Uniprot:Q08999
Length = 1139
Score = 298 (110.0 bits), Expect = 4.3e-25, P = 4.3e-25
Identities = 68/177 (38%), Positives = 99/177 (55%)
Query: 2 AMTPRTPLTGRHYLSKRDLEYGNVTPVKTATQSISRLN-LLCGRDPNPSPALTRIFEACN 60
A+ TPLTG Y+ + VTPV TAT S+SRL+ +L G PS L +I C+
Sbjct: 396 ALRISTPLTGVRYIKENS---PCVTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCS 452
Query: 61 KNPQPLIDSVLTNLGDKFTQHYSASGD---TARDFAEKRLSVAVCLYYKLLESILADEQK 117
++P I + L + + ++QH+ D A++ A K A LYYK+LES++ EQK
Sbjct: 453 RDPTQAIANRLKEMFEIYSQHFQPDEDFSNCAKEIASKHFRFAEMLYYKVLESVIEQEQK 512
Query: 118 KPA-YDFNVLLSLQIFHETLFACCIEIVIFCYNS-NSFPWILSVLGIEPYHFYKVIE 172
+ D + +L FH +L ACC+E+V F Y +FP+I + + YHFYKVIE
Sbjct: 513 RLGDMDLSGILEQDAFHRSLLACCLEVVTFSYKPPGNFPFITEIFDVPLYHFYKVIE 569
>UNIPROTKB|E2RIG3 [details] [associations]
symbol:RBL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043550 "regulation of lipid kinase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 GO:GO:0005737 GO:GO:0005730 GO:GO:0005667
GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 GeneTree:ENSGT00530000063235 InterPro:IPR024599
Pfam:PF11934 GO:GO:0043550 CTD:5934 KO:K16332 OMA:PPGNFPF
EMBL:AAEX03001603 RefSeq:XP_535303.2 Ensembl:ENSCAFT00000015343
GeneID:478127 KEGG:cfa:478127 Uniprot:E2RIG3
Length = 1139
Score = 291 (107.5 bits), Expect = 2.4e-24, P = 2.4e-24
Identities = 67/176 (38%), Positives = 97/176 (55%)
Query: 2 AMTPRTPLTGRHYLSKRDLEYGNVTPVKTATQSISRLN-LLCGRDPNPSPALTRIFEACN 60
A+ TPLTG Y+ VTPV TAT S+SRL+ +L G PS L +I C+
Sbjct: 396 ALRISTPLTGVRYMKDNS---PCVTPVSTATHSLSRLHTMLTGLRNAPSEKLEQILRTCS 452
Query: 61 KNPQPLIDSVLTNLGDKFTQHYSASGD--TARDFAEKRLSVAVCLYYKLLESILADEQKK 118
++P I + L + + ++QH D +++ A K A LYYK+LES++ EQK+
Sbjct: 453 RDPTQAIANRLKEMYEIYSQHCQPDEDFSNSKEIASKHFRFAEMLYYKVLESVIEQEQKR 512
Query: 119 PA-YDFNVLLSLQIFHETLFACCIEIVIFCYNS-NSFPWILSVLGIEPYHFYKVIE 172
D + +L FH +L ACC+E+V F Y +FP+I + + YHFYKVIE
Sbjct: 513 LGDMDLSGILEQDAFHRSLLACCLEVVTFSYKPPGNFPFITEIFDVPLYHFYKVIE 568
>MGI|MGI:105085 [details] [associations]
symbol:Rbl2 "retinoblastoma-like 2" species:10090 "Mus
musculus" [GO:0000785 "chromatin" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005667 "transcription
factor complex" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0043550 "regulation of lipid kinase activity"
evidence=ISO] [GO:0051726 "regulation of cell cycle" evidence=IEA]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
EMBL:U50850 MGI:MGI:105085 GO:GO:0005737 GO:GO:0005730
GO:GO:0006355 GO:GO:0003677 GO:GO:0000785 GO:GO:0006351
GO:GO:0016568 GO:GO:0005667 GO:GO:0007049 GO:GO:0051726
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
eggNOG:NOG296920 GeneTree:ENSGT00530000063235 InterPro:IPR024599
Pfam:PF11934 HOGENOM:HOG000273892 HOVERGEN:HBG017710 GO:GO:0043550
CTD:5934 KO:K16332 OMA:PPGNFPF OrthoDB:EOG4PNXG9 EMBL:U36799
EMBL:U47333 EMBL:AK160027 IPI:IPI00317271 RefSeq:NP_035380.3
UniGene:Mm.235580 ProteinModelPortal:Q64700 SMR:Q64700
IntAct:Q64700 MINT:MINT-5181879 STRING:Q64700 PhosphoSite:Q64700
PaxDb:Q64700 PRIDE:Q64700 Ensembl:ENSMUST00000034091 GeneID:19651
KEGG:mmu:19651 InParanoid:Q3TVP8 NextBio:296912 Bgee:Q64700
CleanEx:MM_RBL2 Genevestigator:Q64700 GermOnline:ENSMUSG00000031666
Uniprot:Q64700
Length = 1135
Score = 286 (105.7 bits), Expect = 8.2e-24, P = 8.2e-24
Identities = 65/172 (37%), Positives = 96/172 (55%)
Query: 7 TPLTGRHYLSKRDLEYGNVTPVKTATQSISRLN-LLCGRDPNPSPALTRIFEACNKNPQP 65
TPLTG Y+ + VTPV TA S+SRL+ +L G PS L RI +C+++P
Sbjct: 398 TPLTGVRYVQENS---PCVTPVSTAAHSLSRLHTMLSGLRNAPSEKLERILRSCSRDPTQ 454
Query: 66 LIDSVLTNLGDKFTQHYSAS---GDTARDFAEKRLSVAVCLYYKLLESILADEQKKPA-Y 121
I L + + ++QH+ + A++ A K A LYYK+LES++ EQK+
Sbjct: 455 AIADRLKEMYEIYSQHFQPDENFSNCAKEIANKHFRFAEMLYYKVLESVIEQEQKRLGDM 514
Query: 122 DFNVLLSLQIFHETLFACCIEIVIFCYNS-NSFPWILSVLGIEPYHFYKVIE 172
D + +L FH +L ACC+E+V F + +FP+I + + YHFYKVIE
Sbjct: 515 DLSGVLEHDAFHRSLLACCLEVVAFSHKPPGNFPFIAEIFDVPHYHFYKVIE 566
>RGD|3541 [details] [associations]
symbol:Rbl2 "retinoblastoma-like 2" species:10116 "Rattus
norvegicus" [GO:0000785 "chromatin" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0043550 "regulation of lipid kinase
activity" evidence=IEA;ISO] [GO:0051726 "regulation of cell cycle"
evidence=IEA] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 RGD:3541 GO:GO:0005737 GO:GO:0005730 GO:GO:0006355
GO:GO:0003677 GO:GO:0000785 GO:GO:0006351 GO:GO:0016568 GO:GO:0005667
GO:GO:0007049 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 eggNOG:NOG296920 InterPro:IPR024599
Pfam:PF11934 HOGENOM:HOG000273892 HOVERGEN:HBG017710 GO:GO:0043550
CTD:5934 KO:K16332 OrthoDB:EOG4PNXG9 EMBL:D55627 IPI:IPI00195120
RefSeq:NP_112356.1 UniGene:Rn.11020 ProteinModelPortal:O55081
IntAct:O55081 STRING:O55081 PhosphoSite:O55081 PRIDE:O55081
GeneID:81758 KEGG:rno:81758 InParanoid:O55081 NextBio:615534
Genevestigator:O55081 GermOnline:ENSRNOG00000012153 Uniprot:O55081
Length = 1135
Score = 286 (105.7 bits), Expect = 8.2e-24, P = 8.2e-24
Identities = 64/171 (37%), Positives = 97/171 (56%)
Query: 8 PLTGRHYLSKRDLEYGNVTPVKTATQSISRLN-LLCGRDPNPSPALTRIFEACNKNPQPL 66
PLTG Y+ + VTPV TAT S++RL+ +L G PS L +I +C+++P
Sbjct: 399 PLTGVRYVQENS---PCVTPVSTATHSLNRLHTMLAGLRNAPSEKLEQILRSCSRDPTRA 455
Query: 67 IDSVLTNLGDKFTQHYSAS---GDTARDFAEKRLSVAVCLYYKLLESILADEQKKPA-YD 122
I L + + ++QH+ + A++ A K A LYYK+LES++ EQK+ D
Sbjct: 456 IADRLREMYEIYSQHFQPDENVSNCAKEMANKHFRFAEMLYYKVLESVIEQEQKRLGDMD 515
Query: 123 FNVLLSLQIFHETLFACCIEIVIFCYNS-NSFPWILSVLGIEPYHFYKVIE 172
+ +L FH++L ACC+E+V F Y +FP+I + + YHFYKVIE
Sbjct: 516 LSGVLEQDAFHKSLLACCLEVVAFSYKPPGNFPFIAEIFDVPHYHFYKVIE 566
>UNIPROTKB|O55081 [details] [associations]
symbol:Rbl2 "Retinoblastoma-like protein 2" species:10116
"Rattus norvegicus" [GO:0051726 "regulation of cell cycle"
evidence=IEA] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 RGD:3541 GO:GO:0005737 GO:GO:0005730 GO:GO:0006355
GO:GO:0003677 GO:GO:0000785 GO:GO:0006351 GO:GO:0016568
GO:GO:0005667 GO:GO:0007049 GO:GO:0051726 Gene3D:1.10.472.10
InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954 eggNOG:NOG296920
InterPro:IPR024599 Pfam:PF11934 HOGENOM:HOG000273892
HOVERGEN:HBG017710 GO:GO:0043550 CTD:5934 KO:K16332
OrthoDB:EOG4PNXG9 EMBL:D55627 IPI:IPI00195120 RefSeq:NP_112356.1
UniGene:Rn.11020 ProteinModelPortal:O55081 IntAct:O55081
STRING:O55081 PhosphoSite:O55081 PRIDE:O55081 GeneID:81758
KEGG:rno:81758 InParanoid:O55081 NextBio:615534
Genevestigator:O55081 GermOnline:ENSRNOG00000012153 Uniprot:O55081
Length = 1135
Score = 286 (105.7 bits), Expect = 8.2e-24, P = 8.2e-24
Identities = 64/171 (37%), Positives = 97/171 (56%)
Query: 8 PLTGRHYLSKRDLEYGNVTPVKTATQSISRLN-LLCGRDPNPSPALTRIFEACNKNPQPL 66
PLTG Y+ + VTPV TAT S++RL+ +L G PS L +I +C+++P
Sbjct: 399 PLTGVRYVQENS---PCVTPVSTATHSLNRLHTMLAGLRNAPSEKLEQILRSCSRDPTRA 455
Query: 67 IDSVLTNLGDKFTQHYSAS---GDTARDFAEKRLSVAVCLYYKLLESILADEQKKPA-YD 122
I L + + ++QH+ + A++ A K A LYYK+LES++ EQK+ D
Sbjct: 456 IADRLREMYEIYSQHFQPDENVSNCAKEMANKHFRFAEMLYYKVLESVIEQEQKRLGDMD 515
Query: 123 FNVLLSLQIFHETLFACCIEIVIFCYNS-NSFPWILSVLGIEPYHFYKVIE 172
+ +L FH++L ACC+E+V F Y +FP+I + + YHFYKVIE
Sbjct: 516 LSGVLEQDAFHKSLLACCLEVVAFSYKPPGNFPFIAEIFDVPHYHFYKVIE 566
>ZFIN|ZDB-GENE-040428-1 [details] [associations]
symbol:rb1 "retinoblastoma 1" species:7955 "Danio
rerio" [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0031290 "retinal ganglion
cell axon guidance" evidence=IMP] [GO:0021554 "optic nerve
development" evidence=IMP] [GO:0007601 "visual perception"
evidence=IMP] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 ZFIN:ZDB-GENE-040428-1 GO:GO:0005634 GO:GO:0051726
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0031290 GO:GO:0021554 GeneTree:ENSGT00530000063235
InterPro:IPR024599 Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934
EMBL:CU694531 IPI:IPI00501767 Ensembl:ENSDART00000024309
ArrayExpress:F1Q9D6 Bgee:F1Q9D6 Uniprot:F1Q9D6
Length = 903
Score = 178 (67.7 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 45/131 (34%), Positives = 69/131 (52%)
Query: 26 TPVKTATQSISRL--NLLCGRDPNPSPALTRIFEACNKNPQPLIDSVLTNLGDKFTQHYS 83
TP++ A SI +L +L G D PS L ++ C +P I + LG+ F Q ++
Sbjct: 359 TPIRAAMTSIQQLRGDLTSGSD-QPSSNLLVYYKNCTVDPSGEIKKRVEELGEVFIQRFA 417
Query: 84 -ASGDTARDFAEKRLSVAVCLYYKLLESILADEQKK-PAYDFNVLLSLQIFHETLFACCI 141
A G KR + LYYK++ES+L E+K+ +F+ LL+ FH +L AC +
Sbjct: 418 QAVGQHCEGLGRKRFYLGAQLYYKVMESMLKSEEKRLSVQNFSKLLNNAAFHTSLLACAL 477
Query: 142 EIVIFCYNSNS 152
E+VI Y +S
Sbjct: 478 EVVIATYVGSS 488
Score = 75 (31.5 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 153 FPWILSVLGIEPYHFYKVIEWLLTPNP 179
FPWILSV + + FYKVIE + P
Sbjct: 510 FPWILSVFQLPAFDFYKVIESFIKAEP 536
>UNIPROTKB|F1MD46 [details] [associations]
symbol:RB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071930 "negative regulation of transcription involved
in G1/S phase of mitotic cell cycle" evidence=IEA] [GO:0071922
"regulation of cohesin localization to chromatin" evidence=IEA]
[GO:0071459 "protein localization to chromosome, centromeric
region" evidence=IEA] [GO:0051402 "neuron apoptotic process"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051146 "striated muscle
cell differentiation" evidence=IEA] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=IEA]
[GO:0048667 "cell morphogenesis involved in neuron differentiation"
evidence=IEA] [GO:0048565 "digestive tract development"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045879
"negative regulation of smoothened signaling pathway" evidence=IEA]
[GO:0045842 "positive regulation of mitotic metaphase/anaphase
transition" evidence=IEA] [GO:0045651 "positive regulation of
macrophage differentiation" evidence=IEA] [GO:0045445 "myoblast
differentiation" evidence=IEA] [GO:0043550 "regulation of lipid
kinase activity" evidence=IEA] [GO:0043353 "enucleate erythrocyte
differentiation" evidence=IEA] [GO:0042551 "neuron maturation"
evidence=IEA] [GO:0035189 "Rb-E2F complex" evidence=IEA]
[GO:0034088 "maintenance of mitotic sister chromatid cohesion"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031175 "neuron projection development"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0019900 "kinase binding" evidence=IEA]
[GO:0016605 "PML body" evidence=IEA] [GO:0007265 "Ras protein
signal transduction" evidence=IEA] [GO:0007090 "regulation of S
phase of mitotic cell cycle" evidence=IEA] [GO:0007050 "cell cycle
arrest" evidence=IEA] [GO:0006469 "negative regulation of protein
kinase activity" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=IEA] [GO:0001047 "core promoter binding"
evidence=IEA] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 GO:GO:0007265 GO:GO:0051301 GO:GO:0005819
GO:GO:0006469 GO:GO:0016605 GO:GO:0045944 GO:GO:0051402
GO:GO:0007050 GO:GO:0001047 GO:GO:0051146 GO:GO:0031175
GO:GO:0048565 GO:GO:0071459 GO:GO:0050680 GO:GO:0045445
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0031134 GO:GO:0007090 GO:GO:0045651 GO:GO:0071922
GO:GO:0045842 GO:GO:0045879 GO:GO:0042551 GO:GO:0035189
GO:GO:0043353 GO:GO:0034088 GO:GO:0071930 GO:GO:0048667
GeneTree:ENSGT00530000063235 InterPro:IPR024599 Pfam:PF11934
GO:GO:0043550 InterPro:IPR015030 Pfam:PF08934 InterPro:IPR015652
PANTHER:PTHR13742:SF10 OMA:TNILQYA EMBL:DAAA02032883
EMBL:DAAA02032882 EMBL:DAAA02032884 EMBL:DAAA02032885
IPI:IPI00703019 UniGene:Bt.47780 Ensembl:ENSBTAT00000008728
Uniprot:F1MD46
Length = 928
Score = 225 (84.3 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 53/161 (32%), Positives = 89/161 (55%)
Query: 26 TPVKTATQSISRLNLLCGR-DPNPSPALTRIFEACNKNPQPLIDSVLTNLGDKFTQHYS- 83
TPV+T +I +L ++ PS L F C NP+ I + ++GD F + ++
Sbjct: 373 TPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKDSILKRVKDIGDVFKEKFAK 432
Query: 84 ASGDTARDFAEKRLSVAVCLYYKLLESIL-ADEQKKPAYDFNVLLSLQIFHETLFACCIE 142
A G + +R + V LYY+++ES+L ++E++ +F+ LL+ IFH +L AC +E
Sbjct: 433 AVGQGCMEIGSQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALE 492
Query: 143 IVIFCYNSN-----------SFPWILSVLGIEPYHFYKVIE 172
+V+ Y+ + SFPWIL+V ++ + FYKVIE
Sbjct: 493 VVMATYSRSMSQSLDTGTDLSFPWILNVFNLKAFDFYKVIE 533
>RGD|3540 [details] [associations]
symbol:Rb1 "retinoblastoma 1" species:10116 "Rattus norvegicus"
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=ISO]
[GO:0000122 "negative regulation of transcription from RNA polymerase
II promoter" evidence=ISO] [GO:0001047 "core promoter binding"
evidence=IEA;ISO] [GO:0001102 "RNA polymerase II activating
transcription factor binding" evidence=IEA;ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;ISS;IDA]
[GO:0005667 "transcription factor complex" evidence=ISO] [GO:0005819
"spindle" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006469 "negative regulation of
protein kinase activity" evidence=ISO;ISS] [GO:0007050 "cell cycle
arrest" evidence=IEA;ISO] [GO:0007090 "regulation of S phase of
mitotic cell cycle" evidence=IEA;ISO] [GO:0007265 "Ras protein signal
transduction" evidence=IEA;ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO;ISS] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016605 "PML body" evidence=ISO;ISS] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0019900 "kinase binding"
evidence=ISO;ISS] [GO:0030182 "neuron differentiation" evidence=ISO]
[GO:0031134 "sister chromatid biorientation" evidence=IEA;ISO]
[GO:0031175 "neuron projection development" evidence=IEA;ISO]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA;ISO]
[GO:0034088 "maintenance of mitotic sister chromatid cohesion"
evidence=IEA;ISO] [GO:0035189 "Rb-E2F complex" evidence=IEA;ISO]
[GO:0035914 "skeletal muscle cell differentiation" evidence=ISO]
[GO:0042551 "neuron maturation" evidence=IEA;ISO] [GO:0043353
"enucleate erythrocyte differentiation" evidence=IEA;ISO] [GO:0043550
"regulation of lipid kinase activity" evidence=ISO;ISS] [GO:0045445
"myoblast differentiation" evidence=ISO;ISS] [GO:0045651 "positive
regulation of macrophage differentiation" evidence=IEA;ISO]
[GO:0045786 "negative regulation of cell cycle" evidence=ISO]
[GO:0045842 "positive regulation of mitotic metaphase/anaphase
transition" evidence=IEA;ISO] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA;ISO] [GO:0048565 "digestive tract development"
evidence=IEA;ISO] [GO:0048667 "cell morphogenesis involved in neuron
differentiation" evidence=IEA;ISO] [GO:0050680 "negative regulation
of epithelial cell proliferation" evidence=IEA;ISO] [GO:0051146
"striated muscle cell differentiation" evidence=IEA;ISO] [GO:0051219
"phosphoprotein binding" evidence=IEA;ISO] [GO:0051301 "cell
division" evidence=IEA;ISO] [GO:0051402 "neuron apoptotic process"
evidence=IEA;ISO] [GO:0051726 "regulation of cell cycle"
evidence=ISO] [GO:0071459 "protein localization to chromosome,
centromeric region" evidence=IEA;ISO] [GO:0071922 "regulation of
cohesin localization to chromatin" evidence=IEA;ISO] [GO:0071930
"negative regulation of transcription involved in G1/S phase of
mitotic cell cycle" evidence=IEA;ISO] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 RGD:3540 GO:GO:0007265
GO:GO:0051301 GO:GO:0005819 GO:GO:0006469 GO:GO:0016605 GO:GO:0045944
GO:GO:0051402 GO:GO:0007050 GO:GO:0006351 GO:GO:0016568 GO:GO:0019900
GO:GO:0001047 GO:GO:0008134 GO:GO:0051146 GO:GO:0031175 GO:GO:0048565
GO:GO:0071459 GO:GO:0050680 GO:GO:0045445 Gene3D:1.10.472.10
InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0031134
GO:GO:0007090 GO:GO:0045651 GO:GO:0071922 GO:GO:0045842 GO:GO:0045879
GO:GO:0042551 GO:GO:0035189 GO:GO:0043353 GO:GO:0034088 GO:GO:0071930
GO:GO:0048667 eggNOG:NOG296920 GeneTree:ENSGT00530000063235
InterPro:IPR024599 Pfam:PF11934 GO:GO:0043550 InterPro:IPR015030
Pfam:PF08934 CTD:5925 HOGENOM:HOG000136539 HOVERGEN:HBG008967
KO:K06618 InterPro:IPR015652 PANTHER:PTHR13742:SF10 OMA:TNILQYA
OrthoDB:EOG4TXBRB EMBL:D25233 EMBL:L07126 IPI:IPI00192561 PIR:S35544
RefSeq:NP_058741.1 UniGene:Rn.55115 IntAct:P33568 STRING:P33568
PhosphoSite:P33568 PRIDE:P33568 Ensembl:ENSRNOT00000021752
GeneID:24708 KEGG:rno:24708 UCSC:RGD:3540 InParanoid:P33568
NextBio:604187 Genevestigator:P33568 GermOnline:ENSRNOG00000016029
Uniprot:P33568
Length = 920
Score = 223 (83.6 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 56/161 (34%), Positives = 89/161 (55%)
Query: 26 TPVKTATQSISRLN-LLCGRDPNPSPALTRIFEACNKNPQPLIDSVLTNLGDKFTQHY-S 83
TPV+T +I +L +L PS L F C NP+ I + ++G F + + S
Sbjct: 366 TPVRTVMNTIQQLMVILNSASDQPSENLISYFSNCTVNPKENILKRVKDVGHIFKEKFAS 425
Query: 84 ASGDTARDFAEKRLSVAVCLYYKLLESIL-ADEQKKPAYDFNVLLSLQIFHETLFACCIE 142
A G D +R + V LYY+++ES+L ++E++ +F+ LL+ IFH +L AC +E
Sbjct: 426 AVGQGCIDIGAQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALE 485
Query: 143 IVIFCYNSN-----------SFPWILSVLGIEPYHFYKVIE 172
+V+ Y+ + SFPWIL+VL ++ + FYKVIE
Sbjct: 486 VVMATYSRSMLQNLDSGTDLSFPWILNVLNLKAFDFYKVIE 526
>UNIPROTKB|E1BZL8 [details] [associations]
symbol:RB1 "Retinoblastoma-associated protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 GO:GO:0005634
GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 GeneTree:ENSGT00530000063235 InterPro:IPR024599
Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934 InterPro:IPR015652
PANTHER:PTHR13742:SF10 EMBL:AADN02005407 EMBL:AADN02005408
EMBL:AADN02005409 IPI:IPI00682055 Ensembl:ENSGALT00000030147
ArrayExpress:E1BZL8 Uniprot:E1BZL8
Length = 902
Score = 222 (83.2 bits), Expect = 4.0e-17, P = 4.0e-17
Identities = 55/172 (31%), Positives = 91/172 (52%)
Query: 26 TPVKTATQSISRLNLLCGRDPN-PSPALTRIFEACNKNPQPLIDSVLTNLGDKFTQHYS- 83
TPV+ A +I +L ++ + PS L F C NP+ I + +LG F + ++
Sbjct: 356 TPVRAAMNTIQQLMMILNSATDKPSDTLIAYFNNCTVNPEDSILKRVESLGHIFKKKFAE 415
Query: 84 ASGDTARDFAEKRLSVAVCLYYKLLESIL-ADEQKKPAYDFNVLLSLQIFHETLFACCIE 142
A G + +R + V LYY+++ES+L ++E++ ++F+ LL+ IFH +L AC +E
Sbjct: 416 AVGQGCAEIGSQRYQLGVRLYYRVMESMLKSEEERLSVHNFSKLLNDNIFHTSLLACALE 475
Query: 143 IVIFCYNSN-------------SFPWILSVLGIEPYHFYKVIEWLLTPNPEV 181
IV+ Y SFPWIL+V ++ + FYKVIE + P +
Sbjct: 476 IVMATYGRTASQSDGTSAETDLSFPWILNVFDLKAFDFYKVIESFIKVEPSL 527
>UNIPROTKB|E1C0H8 [details] [associations]
symbol:RB1 "Retinoblastoma-associated protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 GO:GO:0005634
GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 GeneTree:ENSGT00530000063235 InterPro:IPR024599
Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934 InterPro:IPR015652
PANTHER:PTHR13742:SF10 EMBL:AADN02005407 EMBL:AADN02005408
EMBL:AADN02005409 IPI:IPI00821844 Ensembl:ENSGALT00000036485
ArrayExpress:E1C0H8 Uniprot:E1C0H8
Length = 908
Score = 222 (83.2 bits), Expect = 4.0e-17, P = 4.0e-17
Identities = 55/172 (31%), Positives = 91/172 (52%)
Query: 26 TPVKTATQSISRLNLLCGRDPN-PSPALTRIFEACNKNPQPLIDSVLTNLGDKFTQHYS- 83
TPV+ A +I +L ++ + PS L F C NP+ I + +LG F + ++
Sbjct: 362 TPVRAAMNTIQQLMMILNSATDKPSDTLIAYFNNCTVNPEDSILKRVESLGHIFKKKFAE 421
Query: 84 ASGDTARDFAEKRLSVAVCLYYKLLESIL-ADEQKKPAYDFNVLLSLQIFHETLFACCIE 142
A G + +R + V LYY+++ES+L ++E++ ++F+ LL+ IFH +L AC +E
Sbjct: 422 AVGQGCAEIGSQRYQLGVRLYYRVMESMLKSEEERLSVHNFSKLLNDNIFHTSLLACALE 481
Query: 143 IVIFCYNSN-------------SFPWILSVLGIEPYHFYKVIEWLLTPNPEV 181
IV+ Y SFPWIL+V ++ + FYKVIE + P +
Sbjct: 482 IVMATYGRTASQSDGTSAETDLSFPWILNVFDLKAFDFYKVIESFIKVEPSL 533
>UNIPROTKB|Q90600 [details] [associations]
symbol:RB1 "Retinoblastoma-associated protein" species:9031
"Gallus gallus" [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
GO:GO:0005634 GO:GO:0019048 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0016568 GO:GO:0007049 GO:GO:0051726
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
eggNOG:NOG296920 InterPro:IPR024599 Pfam:PF11934 InterPro:IPR015030
Pfam:PF08934 HSSP:P06400 EMBL:X72218 EMBL:U00113 EMBL:X72217
IPI:IPI00592698 PIR:S45298 RefSeq:NP_989750.1 UniGene:Gga.2986
ProteinModelPortal:Q90600 SMR:Q90600 STRING:Q90600 GeneID:386582
KEGG:gga:386582 CTD:5925 HOGENOM:HOG000136539 HOVERGEN:HBG008967
KO:K06618 NextBio:20813945 InterPro:IPR015652
PANTHER:PTHR13742:SF10 Uniprot:Q90600
Length = 921
Score = 222 (83.2 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 55/172 (31%), Positives = 91/172 (52%)
Query: 26 TPVKTATQSISRLNLLCGRDPN-PSPALTRIFEACNKNPQPLIDSVLTNLGDKFTQHYS- 83
TPV+ A +I +L ++ + PS L F C NP+ I + +LG F + ++
Sbjct: 363 TPVRAAMNTIQQLMMILNSATDKPSDTLIAYFNNCTVNPEDSILKRVESLGHIFKKKFAE 422
Query: 84 ASGDTARDFAEKRLSVAVCLYYKLLESIL-ADEQKKPAYDFNVLLSLQIFHETLFACCIE 142
A G + +R + V LYY+++ES+L ++E++ ++F+ LL+ IFH +L AC +E
Sbjct: 423 AVGQGCAEIGSQRYQLGVRLYYRVMESMLKSEEERLSVHNFSKLLNDNIFHTSLLACALE 482
Query: 143 IVIFCYNSN-------------SFPWILSVLGIEPYHFYKVIEWLLTPNPEV 181
IV+ Y SFPWIL+V ++ + FYKVIE + P +
Sbjct: 483 IVMATYGRTASQSDGTSAETDLSFPWILNVFDLKAFDFYKVIESFIKVEPSL 534
>UNIPROTKB|F1NAY1 [details] [associations]
symbol:RB1 "Retinoblastoma-associated protein" species:9031
"Gallus gallus" [GO:0001047 "core promoter binding" evidence=IEA]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0006469 "negative regulation of protein kinase activity"
evidence=IEA] [GO:0007050 "cell cycle arrest" evidence=IEA]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0007265 "Ras protein signal transduction"
evidence=IEA] [GO:0016605 "PML body" evidence=IEA] [GO:0019900
"kinase binding" evidence=IEA] [GO:0031134 "sister chromatid
biorientation" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0034088 "maintenance of mitotic sister
chromatid cohesion" evidence=IEA] [GO:0035189 "Rb-E2F complex"
evidence=IEA] [GO:0042551 "neuron maturation" evidence=IEA]
[GO:0043353 "enucleate erythrocyte differentiation" evidence=IEA]
[GO:0043550 "regulation of lipid kinase activity" evidence=IEA]
[GO:0045445 "myoblast differentiation" evidence=IEA] [GO:0045651
"positive regulation of macrophage differentiation" evidence=IEA]
[GO:0045842 "positive regulation of mitotic metaphase/anaphase
transition" evidence=IEA] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048565 "digestive tract development"
evidence=IEA] [GO:0048667 "cell morphogenesis involved in neuron
differentiation" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0051146 "striated
muscle cell differentiation" evidence=IEA] [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0071459 "protein localization to chromosome, centromeric
region" evidence=IEA] [GO:0071922 "regulation of cohesin
localization to chromatin" evidence=IEA] [GO:0071930 "negative
regulation of transcription involved in G1/S phase of mitotic cell
cycle" evidence=IEA] InterPro:IPR002719 InterPro:IPR002720
Pfam:PF01857 Pfam:PF01858 GO:GO:0007265 GO:GO:0051301 GO:GO:0005819
GO:GO:0006469 GO:GO:0016605 GO:GO:0045944 GO:GO:0051402
GO:GO:0007050 GO:GO:0001047 GO:GO:0071459 GO:GO:0050680
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0031134 GO:GO:0007090 GO:GO:0045651 GO:GO:0071922
GO:GO:0045842 GO:GO:0045879 GO:GO:0035189 GO:GO:0034088
GO:GO:0071930 GeneTree:ENSGT00530000063235 InterPro:IPR024599
Pfam:PF11934 GO:GO:0043550 InterPro:IPR015030 Pfam:PF08934
InterPro:IPR015652 PANTHER:PTHR13742:SF10 OMA:TNILQYA
EMBL:AADN02005407 EMBL:AADN02005408 EMBL:AADN02005409
IPI:IPI00819754 Ensembl:ENSGALT00000036486 ArrayExpress:F1NAY1
Uniprot:F1NAY1
Length = 962
Score = 222 (83.2 bits), Expect = 4.4e-17, P = 4.4e-17
Identities = 55/172 (31%), Positives = 91/172 (52%)
Query: 26 TPVKTATQSISRLNLLCGRDPN-PSPALTRIFEACNKNPQPLIDSVLTNLGDKFTQHYS- 83
TPV+ A +I +L ++ + PS L F C NP+ I + +LG F + ++
Sbjct: 416 TPVRAAMNTIQQLMMILNSATDKPSDTLIAYFNNCTVNPEDSILKRVESLGHIFKKKFAE 475
Query: 84 ASGDTARDFAEKRLSVAVCLYYKLLESIL-ADEQKKPAYDFNVLLSLQIFHETLFACCIE 142
A G + +R + V LYY+++ES+L ++E++ ++F+ LL+ IFH +L AC +E
Sbjct: 476 AVGQGCAEIGSQRYQLGVRLYYRVMESMLKSEEERLSVHNFSKLLNDNIFHTSLLACALE 535
Query: 143 IVIFCYNSN-------------SFPWILSVLGIEPYHFYKVIEWLLTPNPEV 181
IV+ Y SFPWIL+V ++ + FYKVIE + P +
Sbjct: 536 IVMATYGRTASQSDGTSAETDLSFPWILNVFDLKAFDFYKVIESFIKVEPSL 587
>UNIPROTKB|F1RK14 [details] [associations]
symbol:RB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071930 "negative regulation of transcription involved
in G1/S phase of mitotic cell cycle" evidence=IEA] [GO:0071922
"regulation of cohesin localization to chromatin" evidence=IEA]
[GO:0071459 "protein localization to chromosome, centromeric
region" evidence=IEA] [GO:0051402 "neuron apoptotic process"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051146 "striated muscle
cell differentiation" evidence=IEA] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=IEA]
[GO:0048667 "cell morphogenesis involved in neuron differentiation"
evidence=IEA] [GO:0048565 "digestive tract development"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045879
"negative regulation of smoothened signaling pathway" evidence=IEA]
[GO:0045842 "positive regulation of mitotic metaphase/anaphase
transition" evidence=IEA] [GO:0045651 "positive regulation of
macrophage differentiation" evidence=IEA] [GO:0045445 "myoblast
differentiation" evidence=IEA] [GO:0043550 "regulation of lipid
kinase activity" evidence=IEA] [GO:0043353 "enucleate erythrocyte
differentiation" evidence=IEA] [GO:0042551 "neuron maturation"
evidence=IEA] [GO:0035189 "Rb-E2F complex" evidence=IEA]
[GO:0034088 "maintenance of mitotic sister chromatid cohesion"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031175 "neuron projection development"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0019900 "kinase binding" evidence=IEA]
[GO:0016605 "PML body" evidence=IEA] [GO:0007265 "Ras protein
signal transduction" evidence=IEA] [GO:0007090 "regulation of S
phase of mitotic cell cycle" evidence=IEA] [GO:0007050 "cell cycle
arrest" evidence=IEA] [GO:0006469 "negative regulation of protein
kinase activity" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=IEA] [GO:0001047 "core promoter binding"
evidence=IEA] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 GO:GO:0007265 GO:GO:0051301 GO:GO:0005819
GO:GO:0006469 GO:GO:0016605 GO:GO:0045944 GO:GO:0051402
GO:GO:0007050 GO:GO:0001047 GO:GO:0051146 GO:GO:0031175
GO:GO:0048565 GO:GO:0071459 GO:GO:0050680 GO:GO:0045445
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0031134 GO:GO:0007090 GO:GO:0045651 GO:GO:0071922
GO:GO:0045842 GO:GO:0045879 GO:GO:0042551 GO:GO:0035189
GO:GO:0043353 GO:GO:0034088 GO:GO:0071930 GO:GO:0048667
GeneTree:ENSGT00530000063235 InterPro:IPR024599 Pfam:PF11934
GO:GO:0043550 InterPro:IPR015030 Pfam:PF08934 CTD:5925 KO:K06618
InterPro:IPR015652 PANTHER:PTHR13742:SF10 OMA:TNILQYA EMBL:CU457728
EMBL:CU406986 RefSeq:XP_001926888.4 Ensembl:ENSSSCT00000010300
GeneID:100151828 KEGG:ssc:100151828 Uniprot:F1RK14
Length = 938
Score = 220 (82.5 bits), Expect = 6.9e-17, P = 6.9e-17
Identities = 53/161 (32%), Positives = 89/161 (55%)
Query: 26 TPVKTATQSISRLNLLCGR-DPNPSPALTRIFEACNKNPQPLIDSVLTNLGDKFTQHYS- 83
TPV+T +I +L ++ PS L F C NP+ I + ++G F + ++
Sbjct: 382 TPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKESILKRVKDIGYIFKEQFAK 441
Query: 84 ASGDTARDFAEKRLSVAVCLYYKLLESIL-ADEQKKPAYDFNVLLSLQIFHETLFACCIE 142
A G + +R + V LYY+++ES+L ++E++ +F+ LL+ IFH +L AC +E
Sbjct: 442 AVGQGCMEIGSQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALE 501
Query: 143 IVIFCYNSN-----------SFPWILSVLGIEPYHFYKVIE 172
+V+ Y+ + SFPWIL+VL ++ + FYKVIE
Sbjct: 502 VVMATYSRSTSQNLDTGTDLSFPWILNVLNLKAFDFYKVIE 542
>MGI|MGI:97874 [details] [associations]
symbol:Rb1 "retinoblastoma 1" species:10090 "Mus musculus"
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI;IDA] [GO:0001047 "core
promoter binding" evidence=ISO] [GO:0001102 "RNA polymerase II
activating transcription factor binding" evidence=IPI] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005819 "spindle"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006469 "negative regulation of
protein kinase activity" evidence=ISO] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007050 "cell cycle arrest" evidence=IMP]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=IMP] [GO:0007346 "regulation of mitotic cell cycle"
evidence=ISO;IMP] [GO:0008134 "transcription factor binding"
evidence=ISO;IPI] [GO:0008285 "negative regulation of cell
proliferation" evidence=IGI;IMP] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016605 "PML body" evidence=ISO]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0019900 "kinase
binding" evidence=ISO] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0031134 "sister chromatid biorientation"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=IMP] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0034088 "maintenance of mitotic sister chromatid
cohesion" evidence=ISO] [GO:0035189 "Rb-E2F complex" evidence=IDA]
[GO:0035914 "skeletal muscle cell differentiation" evidence=IMP]
[GO:0042551 "neuron maturation" evidence=IMP] [GO:0043353
"enucleate erythrocyte differentiation" evidence=IGI] [GO:0043550
"regulation of lipid kinase activity" evidence=ISO] [GO:0045445
"myoblast differentiation" evidence=ISO] [GO:0045651 "positive
regulation of macrophage differentiation" evidence=IGI] [GO:0045786
"negative regulation of cell cycle" evidence=IMP] [GO:0045842
"positive regulation of mitotic metaphase/anaphase transition"
evidence=ISO] [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=ISO;IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IGI;IMP;IDA] [GO:0048565 "digestive tract
development" evidence=IMP] [GO:0048667 "cell morphogenesis involved
in neuron differentiation" evidence=IMP] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=IMP]
[GO:0051146 "striated muscle cell differentiation" evidence=IGI]
[GO:0051219 "phosphoprotein binding" evidence=ISO] [GO:0051301
"cell division" evidence=IMP] [GO:0051402 "neuron apoptotic
process" evidence=IMP] [GO:0051726 "regulation of cell cycle"
evidence=IMP] [GO:0071459 "protein localization to chromosome,
centromeric region" evidence=ISO] [GO:0071922 "regulation of
cohesin localization to chromatin" evidence=ISO] [GO:0071930
"negative regulation of transcription involved in G1/S phase of
mitotic cell cycle" evidence=IGI] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 MGI:MGI:97874
GO:GO:0007265 GO:GO:0051301 GO:GO:0005819 GO:GO:0006469
GO:GO:0016605 GO:GO:0045944 GO:GO:0051402 GO:GO:0007050
GO:GO:0006351 GO:GO:0016568 GO:GO:0019900 GO:GO:0001047
GO:GO:0008134 GO:GO:0031175 GO:GO:0048565 GO:GO:0071459
GO:GO:0050680 GO:GO:0035914 GO:GO:0045445 Gene3D:1.10.472.10
InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0031134
GO:GO:0007090 GO:GO:0045651 GO:GO:0071922 GO:GO:0045842
GO:GO:0045879 GO:GO:0042551 GO:GO:0035189 GO:GO:0043353
GO:GO:0034088 GO:GO:0071930 GO:GO:0048667 eggNOG:NOG296920
GeneTree:ENSGT00530000063235 InterPro:IPR024599 Pfam:PF11934
GO:GO:0043550 InterPro:IPR015030 Pfam:PF08934 CTD:5925
HOGENOM:HOG000136539 HOVERGEN:HBG008967 KO:K06618
InterPro:IPR015652 PANTHER:PTHR13742:SF10 OMA:TNILQYA
OrthoDB:EOG4TXBRB EMBL:M26391 EMBL:DQ400415 EMBL:BC096525
IPI:IPI00121418 PIR:A33718 RefSeq:NP_033055.2 UniGene:Mm.273862
ProteinModelPortal:P13405 SMR:P13405 DIP:DIP-37637N IntAct:P13405
MINT:MINT-225292 STRING:P13405 PhosphoSite:P13405 PaxDb:P13405
PRIDE:P13405 Ensembl:ENSMUST00000022701 GeneID:19645 KEGG:mmu:19645
InParanoid:Q4VA62 NextBio:296890 Bgee:P13405 CleanEx:MM_RB1
Genevestigator:P13405 GermOnline:ENSMUSG00000022105 Uniprot:P13405
Length = 921
Score = 219 (82.2 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 55/161 (34%), Positives = 89/161 (55%)
Query: 26 TPVKTATQSISRLN-LLCGRDPNPSPALTRIFEACNKNPQPLIDSVLTNLGDKFTQHYS- 83
TPV+T +I +L +L PS L F C NP+ I + ++G F + ++
Sbjct: 367 TPVRTVMNTIQQLMVILNSASDQPSENLISYFNNCTVNPKENILKRVKDVGHIFKEKFAN 426
Query: 84 ASGDTARDFAEKRLSVAVCLYYKLLESIL-ADEQKKPAYDFNVLLSLQIFHETLFACCIE 142
A G D +R + V LYY+++ES+L ++E++ +F+ LL+ IFH +L AC +E
Sbjct: 427 AVGQGCVDIGVQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALE 486
Query: 143 IVIFCYNSN-----------SFPWILSVLGIEPYHFYKVIE 172
+V+ Y+ + SFPWIL+VL ++ + FYKVIE
Sbjct: 487 VVMATYSRSTLQHLDSGTDLSFPWILNVLNLKAFDFYKVIE 527
>UNIPROTKB|J9NU49 [details] [associations]
symbol:RB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
GO:GO:0005634 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 GeneTree:ENSGT00530000063235
InterPro:IPR024599 Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934
InterPro:IPR015652 PANTHER:PTHR13742:SF10 EMBL:AAEX03013115
EMBL:AAEX03013116 EMBL:AAEX03013117 EMBL:AAEX03013118
Ensembl:ENSCAFT00000045816 Uniprot:J9NU49
Length = 920
Score = 218 (81.8 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 53/161 (32%), Positives = 89/161 (55%)
Query: 26 TPVKTATQSISRLNLLCGR-DPNPSPALTRIFEACNKNPQPLIDSVLTNLGDKFTQHYS- 83
TPV+T +I +L ++ PS L F C NP+ I + ++G F + ++
Sbjct: 365 TPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKESILKRVKDVGYIFKEKFAK 424
Query: 84 ASGDTARDFAEKRLSVAVCLYYKLLESIL-ADEQKKPAYDFNVLLSLQIFHETLFACCIE 142
A G + +R + V LYY+++ES+L ++E++ +F+ LL+ IFH +L AC +E
Sbjct: 425 AVGQGCMEIGSQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDDIFHMSLLACALE 484
Query: 143 IVIFCYNSN-----------SFPWILSVLGIEPYHFYKVIE 172
+V+ Y+ + SFPWIL+VL ++ + FYKVIE
Sbjct: 485 VVMATYSRSTSQNLDTGTDLSFPWILNVLNLKAFDFYKVIE 525
>UNIPROTKB|Q9BDQ3 [details] [associations]
symbol:RB1 "Retinoblastoma protein 1" species:9598 "Pan
troglodytes" [GO:0005634 "nucleus" evidence=ISS] [GO:0006469
"negative regulation of protein kinase activity" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0016605 "PML body" evidence=ISS] [GO:0019900 "kinase binding"
evidence=ISS] [GO:0043550 "regulation of lipid kinase activity"
evidence=ISS] [GO:0045445 "myoblast differentiation" evidence=ISS]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
GO:GO:0006469 GO:GO:0016605 GO:GO:0019900 GO:GO:0051726
GO:GO:0008134 GO:GO:0045445 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 eggNOG:NOG296920 InterPro:IPR024599
Pfam:PF11934 GO:GO:0043550 InterPro:IPR015030 Pfam:PF08934
HSSP:P06400 HOGENOM:HOG000136539 HOVERGEN:HBG008967
InterPro:IPR015652 PANTHER:PTHR13742:SF10 OrthoDB:EOG4TXBRB
EMBL:AH010623 ProteinModelPortal:Q9BDQ3 STRING:Q9BDQ3
InParanoid:Q9BDQ3 Uniprot:Q9BDQ3
Length = 882
Score = 217 (81.4 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 53/161 (32%), Positives = 89/161 (55%)
Query: 26 TPVKTATQSISRLNLLCGR-DPNPSPALTRIFEACNKNPQPLIDSVLTNLGDKFTQHYS- 83
TPV+T +I +L ++ PS L F C NP+ I + ++G F + ++
Sbjct: 327 TPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKESILKRVKDIGYIFKEKFAK 386
Query: 84 ASGDTARDFAEKRLSVAVCLYYKLLESIL-ADEQKKPAYDFNVLLSLQIFHETLFACCIE 142
A G + +R + V LYY+++ES+L ++E++ +F+ LL+ IFH +L AC +E
Sbjct: 387 AVGQGCVEIGSQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALE 446
Query: 143 IVIFCYNSN-----------SFPWILSVLGIEPYHFYKVIE 172
+V+ Y+ + SFPWIL+VL ++ + FYKVIE
Sbjct: 447 VVMATYSRSTSQNLDSGTDLSFPWILNVLNLKAFDFYKVIE 487
>UNIPROTKB|P06400 [details] [associations]
symbol:RB1 "Retinoblastoma-associated protein" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0031175 "neuron projection development" evidence=IEA]
[GO:0042551 "neuron maturation" evidence=IEA] [GO:0043353
"enucleate erythrocyte differentiation" evidence=IEA] [GO:0045651
"positive regulation of macrophage differentiation" evidence=IEA]
[GO:0045879 "negative regulation of smoothened signaling pathway"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048565
"digestive tract development" evidence=IEA] [GO:0048667 "cell
morphogenesis involved in neuron differentiation" evidence=IEA]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=IEA] [GO:0051146 "striated muscle cell differentiation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0051402
"neuron apoptotic process" evidence=IEA] [GO:0071930 "negative
regulation of transcription involved in G1/S phase of mitotic cell
cycle" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016605 "PML body" evidence=IDA] [GO:0043550 "regulation of
lipid kinase activity" evidence=IDA] [GO:0019900 "kinase binding"
evidence=IDA] [GO:0003713 "transcription coactivator activity"
evidence=NAS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0050681 "androgen receptor
binding" evidence=NAS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA;TAS] [GO:0045445
"myoblast differentiation" evidence=IMP] [GO:0006469 "negative
regulation of protein kinase activity" evidence=IPI] [GO:0030521
"androgen receptor signaling pathway" evidence=NAS] [GO:0031625
"ubiquitin protein ligase binding" evidence=IPI] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0001047 "core promoter binding" evidence=IDA] [GO:0000075 "cell
cycle checkpoint" evidence=TAS] [GO:0003677 "DNA binding"
evidence=TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0000785
"chromatin" evidence=TAS] [GO:0000080 "G1 phase of mitotic cell
cycle" evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0007265 "Ras protein
signal transduction" evidence=IEP] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0090230 "regulation of centromere
complex assembly" evidence=TAS] [GO:0034088 "maintenance of mitotic
sister chromatid cohesion" evidence=IMP] [GO:0045842 "positive
regulation of mitotic metaphase/anaphase transition" evidence=IMP]
[GO:0071922 "regulation of cohesin localization to chromatin"
evidence=IMP] [GO:0071459 "protein localization to chromosome,
centromeric region" evidence=IMP] [GO:0016514 "SWI/SNF complex"
evidence=TAS] [GO:0006338 "chromatin remodeling" evidence=TAS]
[GO:0000083 "regulation of transcription involved in G1/S phase of
mitotic cell cycle" evidence=TAS] [GO:0045749 "negative regulation
of S phase of mitotic cell cycle" evidence=TAS] [GO:0007050 "cell
cycle arrest" evidence=TAS] [GO:0035189 "Rb-E2F complex"
evidence=TAS] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=TAS]
[GO:0007093 "mitotic cell cycle checkpoint" evidence=TAS]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
GO:GO:0045892 GO:GO:0007265 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0045893 GO:GO:0030521 GO:GO:0051301 GO:GO:0030308
GO:GO:0005819 GO:GO:0006469 GO:GO:0016605 EMBL:CH471075
GO:GO:0045944 GO:GO:0051402 GO:GO:0000785 GO:GO:0003700
GO:GO:0007050 GO:GO:0006351 GO:GO:0006338 GO:GO:0019900
GO:GO:0003713 GO:GO:0016514 GO:GO:0001047 GO:GO:0043433
GO:GO:0051146 GO:GO:0031175 GO:GO:0048565 GO:GO:0071459
GO:GO:0000084 GO:GO:0050680 GO:GO:0050681 GO:GO:0045749
GO:GO:0045445 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 GO:GO:0031134 GO:GO:0000080
Pathway_Interaction_DB:foxm1pathway GO:GO:0000083 GO:GO:0045651
DrugBank:DB00047 DrugBank:DB00046 DrugBank:DB00030 DrugBank:DB00071
GO:GO:0071922 Reactome:REACT_383 PDB:1H25 PDBsum:1H25 GO:GO:0045842
GO:GO:0045879 GO:GO:0042551 GO:GO:0031575 GO:GO:0035189
GO:GO:0043353 MIM:259500 GO:GO:0034088 PDB:2R7G PDBsum:2R7G
GO:GO:0071930 PDB:1O9K PDB:2AZE PDBsum:1O9K PDBsum:2AZE PDB:1N4M
PDBsum:1N4M GO:GO:0048667 MIM:109800 EMBL:L11910 EMBL:AF551763
EMBL:AL392048 PDB:1GH6 PDBsum:1GH6 PDB:3N5U PDBsum:3N5U
eggNOG:NOG296920 InterPro:IPR024599 Pfam:PF11934 GO:GO:0043550
InterPro:IPR015030 Pfam:PF08934 CTD:5925 HOVERGEN:HBG008967
KO:K06618 InterPro:IPR015652 PANTHER:PTHR13742:SF10 EMBL:M15400
EMBL:M28419 EMBL:M33647 EMBL:L41870 EMBL:M27866 EMBL:M27845
EMBL:M27846 EMBL:M27847 EMBL:M27849 EMBL:M27850 EMBL:M27851
EMBL:L35146 EMBL:M27852 EMBL:M27853 EMBL:M27854 EMBL:M27855
EMBL:M27856 EMBL:M27857 EMBL:M27858 EMBL:M27859 EMBL:M27860
EMBL:L35147 EMBL:M27862 EMBL:M27863 EMBL:M27864 EMBL:M27865
EMBL:L41889 EMBL:L41890 EMBL:L41891 EMBL:L41893 EMBL:L41894
EMBL:L41895 EMBL:L41896 EMBL:L41897 EMBL:L41898 EMBL:L41899
EMBL:L41997 EMBL:X16439 EMBL:AK291258 EMBL:AL136960 EMBL:BC039060
EMBL:BC040540 IPI:IPI00302829 PIR:JS0276 RefSeq:NP_000312.2
UniGene:Hs.408528 PDB:1AD6 PDB:1GUX PDB:1PJM PDB:2QDJ PDB:3POM
PDB:4ELJ PDB:4ELL PDBsum:1AD6 PDBsum:1GUX PDBsum:1PJM PDBsum:2QDJ
PDBsum:3POM PDBsum:4ELJ PDBsum:4ELL ProteinModelPortal:P06400
SMR:P06400 DIP:DIP-582N IntAct:P06400 MINT:MINT-98847 STRING:P06400
PhosphoSite:P06400 DMDM:132164 PaxDb:P06400 PeptideAtlas:P06400
PRIDE:P06400 DNASU:5925 Ensembl:ENST00000267163 GeneID:5925
KEGG:hsa:5925 UCSC:uc001vcb.3 GeneCards:GC13P048877 HGNC:HGNC:9884
HPA:CAB000095 HPA:CAB016687 MIM:180200 MIM:614041
neXtProt:NX_P06400 Orphanet:790 PharmGKB:PA295 InParanoid:P06400
OMA:TNILQYA OrthoDB:EOG4TXBRB PhylomeDB:P06400 BindingDB:P06400
ChEMBL:CHEMBL5288 ChiTaRS:RB1 EvolutionaryTrace:P06400
GenomeRNAi:5925 NextBio:23076 PMAP-CutDB:P06400 ArrayExpress:P06400
Bgee:P06400 CleanEx:HS_RB1 Genevestigator:P06400
GermOnline:ENSG00000139687 GO:GO:0090230 Uniprot:P06400
Length = 928
Score = 217 (81.4 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 53/161 (32%), Positives = 89/161 (55%)
Query: 26 TPVKTATQSISRLNLLCGR-DPNPSPALTRIFEACNKNPQPLIDSVLTNLGDKFTQHYS- 83
TPV+T +I +L ++ PS L F C NP+ I + ++G F + ++
Sbjct: 373 TPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKESILKRVKDIGYIFKEKFAK 432
Query: 84 ASGDTARDFAEKRLSVAVCLYYKLLESIL-ADEQKKPAYDFNVLLSLQIFHETLFACCIE 142
A G + +R + V LYY+++ES+L ++E++ +F+ LL+ IFH +L AC +E
Sbjct: 433 AVGQGCVEIGSQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALE 492
Query: 143 IVIFCYNSN-----------SFPWILSVLGIEPYHFYKVIE 172
+V+ Y+ + SFPWIL+VL ++ + FYKVIE
Sbjct: 493 VVMATYSRSTSQNLDSGTDLSFPWILNVLNLKAFDFYKVIE 533
>UNIPROTKB|F1PQ32 [details] [associations]
symbol:RB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
GO:GO:0005634 GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763
SMART:SM00385 SUPFAM:SSF47954 GeneTree:ENSGT00530000063235
InterPro:IPR024599 Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934
InterPro:IPR015652 PANTHER:PTHR13742:SF10 OMA:TNILQYA
EMBL:AAEX03013115 EMBL:AAEX03013116 EMBL:AAEX03013117
EMBL:AAEX03013118 Ensembl:ENSCAFT00000007150 Uniprot:F1PQ32
Length = 928
Score = 207 (77.9 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 52/160 (32%), Positives = 86/160 (53%)
Query: 26 TPVKTATQSISRLNLLCGR-DPNPSPALTRIFEACNKNPQPLIDSVLTNLGDKFTQHYS- 83
TPV+T +I +L ++ PS L F C NP+ I + ++G F + ++
Sbjct: 376 TPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKESILKRVKDVGYIFKEKFAK 435
Query: 84 ASGDTARDFAEKRLSVAVCLYYKLLESILADEQKKPAYDFNVLLSLQIFHETLFACCIEI 143
A G + +R + V LYY+++ES+L + + +F+ LL+ IFH +L AC +E+
Sbjct: 436 AVGQGCMEIGSQRYKLGVRLYYRVMESML--KSRLSIQNFSKLLNDDIFHMSLLACALEV 493
Query: 144 VIFCYNSN-----------SFPWILSVLGIEPYHFYKVIE 172
V+ Y+ + SFPWIL+VL ++ + FYKVIE
Sbjct: 494 VMATYSRSTSQNLDTGTDLSFPWILNVLNLKAFDFYKVIE 533
>UNIPROTKB|H0YE05 [details] [associations]
symbol:RBL1 "Retinoblastoma-like protein 1" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] InterPro:IPR002720
Pfam:PF01858 GO:GO:0005634 GO:GO:0051726 Gene3D:1.10.472.10
InterPro:IPR013763 SUPFAM:SSF47954 EMBL:AL136172 EMBL:AL365505
EMBL:AL391114 HGNC:HGNC:9893 Ensembl:ENST00000525052 Uniprot:H0YE05
Length = 255
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 38/87 (43%), Positives = 54/87 (62%)
Query: 2 AMTPRTPLTGRHYLSKRDLEYGNVTPVKTATQSISRL-NLLCGRDPNPSPALTRIFEACN 60
+ P TPLTGR YL +++ +TPV +ATQS+SRL +++ G PS L IFE+C
Sbjct: 169 SFAPSTPLTGRRYLREKEAV---ITPVASATQSVSRLQSIVAGLKNAPSDQLINIFESCV 225
Query: 61 KNPQPLIDSVLTNLGDKFTQHYSASGD 87
+NP I +L +G+ F QHY+ S D
Sbjct: 226 RNPVENIMKILKGIGETFCQHYTQSTD 252
>FB|FBgn0015799 [details] [associations]
symbol:Rbf "Retinoblastoma-family protein" species:7227
"Drosophila melanogaster" [GO:0035189 "Rb-E2F complex"
evidence=IDA;TAS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IMP;IDA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0051101
"regulation of DNA binding" evidence=IDA] [GO:0051726 "regulation
of cell cycle" evidence=ISS;IMP] [GO:0000080 "G1 phase of mitotic
cell cycle" evidence=IMP] [GO:0008156 "negative regulation of DNA
replication" evidence=IMP] [GO:0008285 "negative regulation of cell
proliferation" evidence=NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0003677 "DNA binding" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007307 "eggshell
chorion gene amplification" evidence=TAS] [GO:0007113 "endomitotic
cell cycle" evidence=TAS] [GO:0042023 "DNA endoreduplication"
evidence=IMP] [GO:0031523 "Myb complex" evidence=IDA] [GO:0000785
"chromatin" evidence=IDA] [GO:0045749 "negative regulation of S
phase of mitotic cell cycle" evidence=IMP] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0010629 "negative regulation of gene expression" evidence=IMP]
[GO:0008630 "intrinsic apoptotic signaling pathway in response to
DNA damage" evidence=IMP] [GO:0043066 "negative regulation of
apoptotic process" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IGI] InterPro:IPR002719 InterPro:IPR002720
Pfam:PF01857 Pfam:PF01858 GO:GO:0007095 GO:GO:0043066 GO:GO:0008630
GO:GO:0008285 EMBL:AE014298 GO:GO:0000785 GO:GO:0006351
GO:GO:0000122 GO:GO:0044212 GO:GO:0045749 GO:GO:0007113
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0000080 GO:GO:0008156 GO:GO:0051101 GO:GO:0042023
GO:GO:0031523 GO:GO:0007307 GO:GO:0071922 GO:GO:0035189
GO:GO:0034088 Reactome:REACT_118133 EMBL:AL031583 ChiTaRS:Rb97D
EMBL:AY047549 EMBL:AY089532 EMBL:X96975 PIR:T13480
RefSeq:NP_525036.2 UniGene:Dm.4654 ProteinModelPortal:Q24472
SMR:Q24472 IntAct:Q24472 STRING:Q24472 PaxDb:Q24472
EnsemblMetazoa:FBtr0070146 GeneID:31027 KEGG:dme:Dmel_CG7413
CTD:31027 FlyBase:FBgn0015799 eggNOG:NOG296920
GeneTree:ENSGT00530000063235 InParanoid:Q24472 KO:K04681
OMA:CCIDLIY OrthoDB:EOG47D7X2 PhylomeDB:Q24472 GenomeRNAi:31027
NextBio:771579 Bgee:Q24472 GermOnline:CG7413 InterPro:IPR024599
Pfam:PF11934 Uniprot:Q24472
Length = 845
Score = 181 (68.8 bits), Expect = 8.8e-13, P = 8.8e-13
Identities = 55/175 (31%), Positives = 87/175 (49%)
Query: 5 PRTPLTGRHYLSKRDLEYGN-VTPVKTATQSISRLNLLCGRDPNPSPALTRIFEACNKNP 63
P TPLT + L + G+ PV+ AT ++ +L+ GR P+ + + E
Sbjct: 354 PVTPLTRKQDLPAQPAMAGDKFEPVRNATNNVKQLSAF-GRITEPTDFVKQAGEEVIAK- 411
Query: 64 QPLIDSVLTNLGDKFTQHYSASGDTARDFAEKRLSVAVCLYYKLLESIL-ADEQKKPAYD 122
L+ S++ + KF Y ++ A+ R +A ++ LL+ IL A+ + KP D
Sbjct: 412 --LL-SIIEEIEQKFLAKYPSTE------AKSRFQLAKSFFFYLLDQILQAEIRNKPDID 462
Query: 123 FNVLL----SLQIFHETLFACCIEIVIFCYNSN-SFPWILSVLGIEPYHFYKVIE 172
LL SL IF+ TL ACC+E+V+ Y + FPW+L I + F K+IE
Sbjct: 463 LKRLLVQKVSLVIFNITLMACCVELVLEAYKTELKFPWVLDCFSISAFEFQKIIE 517
>UNIPROTKB|F1NV90 [details] [associations]
symbol:RB1 "Retinoblastoma-associated protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 GO:GO:0005634
GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 GeneTree:ENSGT00530000063235 InterPro:IPR024599
Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934 InterPro:IPR015652
PANTHER:PTHR13742:SF10 EMBL:AADN02005407 EMBL:AADN02005408
EMBL:AADN02005409 IPI:IPI00818985 Ensembl:ENSGALT00000027459
ArrayExpress:F1NV90 Uniprot:F1NV90
Length = 881
Score = 166 (63.5 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 41/128 (32%), Positives = 71/128 (55%)
Query: 26 TPVKTATQSISRLNLLCGRDPN-PSPALTRIFEACNKNPQPLIDSVLTNLGDKFTQHYS- 83
TPV+ A +I +L ++ + PS L F C NP+ I + +LG F + ++
Sbjct: 321 TPVRAAMNTIQQLMMILNSATDKPSDTLIAYFNNCTVNPEDSILKRVESLGHIFKKKFAE 380
Query: 84 ASGDTARDFAEK--RLSVAVCLYYKLLESIL-ADEQKKPAYDFNVLLSLQIFHETLFACC 140
A G + + R + V LYY+++ES+L ++E++ ++F+ LL+ IFH +L AC
Sbjct: 381 AVGQGCAEIGSQASRYQLGVRLYYRVMESMLKSEEERLSVHNFSKLLNDNIFHTSLLACA 440
Query: 141 IEIVIFCY 148
+EIV+ Y
Sbjct: 441 LEIVMATY 448
Score = 156 (60.0 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 36/100 (36%), Positives = 58/100 (58%)
Query: 96 RLSVAVCLYYKLLESIL-ADEQKKPAYDFNVLLSLQIFHETLFACCIEIVIFCYNSN--- 151
R + V LYY+++ES+L ++E++ ++F+ LL+ IFH +L AC +EIV+ Y
Sbjct: 395 RYQLGVRLYYRVMESMLKSEEERLSVHNFSKLLNDNIFHTSLLACALEIVMATYGRTASQ 454
Query: 152 ----------SFPWILSVLGIEPYHFYKVIEWLLTPNPEV 181
SFPWIL+V ++ + FYKVIE + P +
Sbjct: 455 SDGTSAETDLSFPWILNVFDLKAFDFYKVIESFIKVEPSL 494
>UNIPROTKB|F1NAY3 [details] [associations]
symbol:RB1 "Retinoblastoma-associated protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 GO:GO:0005634
GO:GO:0051726 Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385
SUPFAM:SSF47954 GeneTree:ENSGT00530000063235 InterPro:IPR024599
Pfam:PF11934 InterPro:IPR015030 Pfam:PF08934 IPI:IPI00592698
InterPro:IPR015652 PANTHER:PTHR13742:SF10 EMBL:AADN02005407
EMBL:AADN02005408 EMBL:AADN02005409 Ensembl:ENSGALT00000036484
ArrayExpress:F1NAY3 Uniprot:F1NAY3
Length = 920
Score = 166 (63.5 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 41/128 (32%), Positives = 71/128 (55%)
Query: 26 TPVKTATQSISRLNLLCGRDPN-PSPALTRIFEACNKNPQPLIDSVLTNLGDKFTQHYS- 83
TPV+ A +I +L ++ + PS L F C NP+ I + +LG F + ++
Sbjct: 360 TPVRAAMNTIQQLMMILNSATDKPSDTLIAYFNNCTVNPEDSILKRVESLGHIFKKKFAE 419
Query: 84 ASGDTARDFAEK--RLSVAVCLYYKLLESIL-ADEQKKPAYDFNVLLSLQIFHETLFACC 140
A G + + R + V LYY+++ES+L ++E++ ++F+ LL+ IFH +L AC
Sbjct: 420 AVGQGCAEIGSQASRYQLGVRLYYRVMESMLKSEEERLSVHNFSKLLNDNIFHTSLLACA 479
Query: 141 IEIVIFCY 148
+EIV+ Y
Sbjct: 480 LEIVMATY 487
Score = 156 (60.0 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 36/100 (36%), Positives = 58/100 (58%)
Query: 96 RLSVAVCLYYKLLESIL-ADEQKKPAYDFNVLLSLQIFHETLFACCIEIVIFCYNSN--- 151
R + V LYY+++ES+L ++E++ ++F+ LL+ IFH +L AC +EIV+ Y
Sbjct: 434 RYQLGVRLYYRVMESMLKSEEERLSVHNFSKLLNDNIFHTSLLACALEIVMATYGRTASQ 493
Query: 152 ----------SFPWILSVLGIEPYHFYKVIEWLLTPNPEV 181
SFPWIL+V ++ + FYKVIE + P +
Sbjct: 494 SDGTSAETDLSFPWILNVFDLKAFDFYKVIESFIKVEPSL 533
>DICTYBASE|DDB_G0290551 [details] [associations]
symbol:rblA "retinoblastoma-like protein"
species:44689 "Dictyostelium discoideum" [GO:0045165 "cell fate
commitment" evidence=IGI] [GO:0010628 "positive regulation of gene
expression" evidence=IMP] [GO:0051330 "G1 phase of meiotic cell
cycle" evidence=IMP] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0045786 "negative regulation of cell
cycle" evidence=ISS] [GO:0044212 "transcription regulatory region
DNA binding" evidence=ISS] [GO:0005667 "transcription factor
complex" evidence=ISS] InterPro:IPR002719 InterPro:IPR002720
Pfam:PF01857 Pfam:PF01858 dictyBase:DDB_G0290551
GenomeReviews:CM000154_GR GO:GO:0005667 GO:GO:0000122
Gene3D:1.10.472.10 InterPro:IPR013763 SUPFAM:SSF47954 GO:GO:0045786
EMBL:AAFI02000164 GO:GO:0030332 eggNOG:NOG296920 InterPro:IPR024599
Pfam:PF11934 EMBL:AB211596 RefSeq:XP_635645.1
ProteinModelPortal:Q54FX2 EnsemblProtists:DDB0232004 GeneID:8627717
KEGG:ddi:DDB_G0290551 InParanoid:Q54FX2 OMA:AWCLLEN GO:GO:0051330
Uniprot:Q54FX2
Length = 1312
Score = 148 (57.2 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 47/166 (28%), Positives = 87/166 (52%)
Query: 26 TPVK-TAT-QSISRLNLLCGRDPNPSPALTRIFEACNKNPQP-----LIDSV--LTNLGD 76
TP+ T T +S ++ + RDPNPS L I ++ ++ Q +I+ V LTN D
Sbjct: 628 TPISLTLTLESWLKVEIQNYRDPNPSLNLINILKSADQPQQTSEVDKMIERVSSLTNNTD 687
Query: 77 K-FT----QHYSASGDTARDFAEKRLSVAVCLYYKLLESILADEQKKPAYDFNVLLSLQI 131
F+ + ++ ++R ++A+ LYY LLE ++ EQ + + NVLL+ +
Sbjct: 688 SLFSIGGIDDHQQQQQQQQEVKQRRKNMAIQLYYCLLEKLIKFEQNTSS-NINVLLNHED 746
Query: 132 FHETLFACCIEIVIFCYNSNS--FPWILSVLGIEPYHFYKVIEWLL 175
FH++L + EI+ + Y FP ++V + P+ + ++I+ +L
Sbjct: 747 FHKSLLSNSFEIIAYVYKMEGLYFPHFINVFKLHPFSYLRLIDLVL 792
>UNIPROTKB|Q66WV0 [details] [associations]
symbol:RBR1 "Retinoblastoma-related protein 1" species:4100
"Nicotiana benthamiana" [GO:0032875 "regulation of DNA
endoreduplication" evidence=IMP] [GO:0051782 "negative regulation
of cell division" evidence=IMP] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 GO:GO:0005634
GO:GO:0006355 GO:GO:0006351 GO:GO:0007049 Gene3D:1.10.472.10
InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0051782
GO:GO:0032875 InterPro:IPR024599 Pfam:PF11934 HSSP:P06400
EMBL:AY699399 ProteinModelPortal:Q66WV0 Uniprot:Q66WV0
Length = 1003
Score = 137 (53.3 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 46/165 (27%), Positives = 82/165 (49%)
Query: 26 TPVKTATQSISRLN-LLCGRDPNPSPALTRIFEACNKN--------PQPLIDSVLTNLGD 76
TPV TA + L ++ P PS L R +C+++ Q +++++ + G
Sbjct: 405 TPVSTAMTTARWLRTVIAPLQPKPSAELERFLSSCDRDVTADVIRRAQIILEAIFPSSGP 464
Query: 77 KFTQHYSASGD----TARD--FAEKRLSVAVCLYYKLLESIL-ADEQKKPAYDFNVLLSL 129
+H +A G + D +AE+R S A+ LYY++L+++ A+ Q + LL+
Sbjct: 465 --AEHCAAGGSLQSTSLMDNIWAEQRRSEALKLYYRVLQTMCTAESQILNGNNLTSLLTN 522
Query: 130 QIFHETLFACCIEIVIFCYNSNS--FPWILSVLGIEPYHFYKVIE 172
+ FH + AC E+V+ + + + FP +L GI + KVIE
Sbjct: 523 ERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIE 567
>TAIR|locus:2082194 [details] [associations]
symbol:RBR1 "retinoblastoma-related 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0051726 "regulation of cell cycle" evidence=IMP] [GO:0051783
"regulation of nuclear division" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010090 "trichome morphogenesis"
evidence=RCA;IMP] [GO:0032875 "regulation of DNA endoreduplication"
evidence=IMP] [GO:0048366 "leaf development" evidence=IMP]
[GO:0001558 "regulation of cell growth" evidence=IMP] [GO:2000036
"regulation of stem cell maintenance" evidence=IMP] [GO:0009553
"embryo sac development" evidence=IMP] [GO:0009567 "double
fertilization forming a zygote and endosperm" evidence=IEP]
[GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IMP;TAS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IPI]
[GO:0009555 "pollen development" evidence=IMP] [GO:0022619
"generative cell differentiation" evidence=IMP] [GO:0001708 "cell
fate specification" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0006261 "DNA-dependent DNA replication"
evidence=RCA] [GO:0042023 "DNA endoreduplication" evidence=RCA]
[GO:0051302 "regulation of cell division" evidence=RCA] [GO:0008356
"asymmetric cell division" evidence=IGI] [GO:0008134 "transcription
factor binding" evidence=TAS] InterPro:IPR002719 InterPro:IPR002720
Pfam:PF01857 Pfam:PF01858 GO:GO:0005829 GO:GO:0005634 GO:GO:0001708
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0019048 GO:GO:0010090
GO:GO:0006355 GO:GO:0001558 GO:GO:0003677 GO:GO:0000082
GO:GO:0006351 GO:GO:0048366 GO:GO:0009553 GO:GO:0008134
EMBL:AP002047 EMBL:AC069472 GO:GO:0006349 GO:GO:0008356
Gene3D:1.10.472.10 InterPro:IPR013763 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0051783 GO:GO:0032875 GO:GO:0009567 GO:GO:2000036
eggNOG:NOG296920 KO:K04681 InterPro:IPR024599 Pfam:PF11934
EMBL:AF245395 EMBL:AY056293 EMBL:AY150438 IPI:IPI00541504
RefSeq:NP_566417.3 UniGene:At.14958 HSSP:P06400
ProteinModelPortal:Q9LKZ3 SMR:Q9LKZ3 DIP:DIP-33046N IntAct:Q9LKZ3
STRING:Q9LKZ3 PaxDb:Q9LKZ3 PRIDE:Q9LKZ3 EnsemblPlants:AT3G12280.1
GeneID:820408 KEGG:ath:AT3G12280 GeneFarm:3420 TAIR:At3g12280
HOGENOM:HOG000078660 InParanoid:Q9LHH8 OMA:FGERICT PhylomeDB:Q9LKZ3
ProtClustDB:CLSN2690882 Genevestigator:Q9LKZ3 GO:GO:0022619
Uniprot:Q9LKZ3
Length = 1013
Score = 134 (52.2 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 47/162 (29%), Positives = 80/162 (49%)
Query: 26 TPVKTATQSISRLN-LLCGRDPNPSPALTRIFEACNKN--------PQPLIDSVLTN--L 74
TPV TA + L ++ P PSP L ++C+++ +++++ N L
Sbjct: 406 TPVSTAMTTAKWLRTVISPLLPKPSPGLEHFLKSCDRDITNDVTRRAHIILEAIFPNSSL 465
Query: 75 GDKFTQHYSASGDTARD-FAEKRLSVAVCLYYKLLESIL-ADEQKKPAYDFNVLLSLQIF 132
G + + D D +AE+R A LYY++LE++ A+ Q A + N LL+ + F
Sbjct: 466 GAQCGGGSLQAVDLMDDIWAEQRRLEACKLYYRVLEAMCKAEAQILHANNLNSLLTNERF 525
Query: 133 HETLFACCIEIVIFCYNSNS--FPWILSVLGIEPYHFYKVIE 172
H + AC E+V+ + + + FP +L GI + KVIE
Sbjct: 526 HRCMLACSAELVLATHKTITMLFPAVLERTGITAFDLSKVIE 567
>WB|WBGene00003020 [details] [associations]
symbol:lin-35 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0051726 "regulation of
cell cycle" evidence=IEA] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0018991 "oviposition" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IGI;IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IGI;IMP] [GO:0000003
"reproduction" evidence=IGI;IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040027 "negative regulation of vulval
development" evidence=IGI;IMP] [GO:0040018 "positive regulation of
multicellular organism growth" evidence=IGI] [GO:0016479 "negative
regulation of transcription from RNA polymerase I promoter"
evidence=ISS] [GO:0048557 "embryonic digestive tract morphogenesis"
evidence=IGI] [GO:0071850 "mitotic cell cycle arrest" evidence=IGI]
InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0018991 GO:GO:0040010 GO:GO:0002119 GO:GO:0010171
GO:GO:0040018 Gene3D:1.10.472.10 InterPro:IPR013763 SUPFAM:SSF47954
GO:GO:0040027 GO:GO:0071850 GO:GO:0048557 EMBL:FO080198
GO:GO:0016479 GeneTree:ENSGT00530000063235 KO:K04681
InterPro:IPR024599 Pfam:PF11934 HSSP:P06400 EMBL:AF116529
PIR:T34024 RefSeq:NP_491686.1 UniGene:Cel.5952
ProteinModelPortal:G5EDT1 SMR:G5EDT1 IntAct:G5EDT1
EnsemblMetazoa:C32F10.2 GeneID:172249 KEGG:cel:CELE_C32F10.2
CTD:172249 WormBase:C32F10.2 OMA:PWILNAL NextBio:874671
Uniprot:G5EDT1
Length = 961
Score = 118 (46.6 bits), Expect = 0.00017, P = 0.00017
Identities = 41/168 (24%), Positives = 80/168 (47%)
Query: 19 DLEYGNVTP-VKTATQSI-SRLNLLCGRDPNPSPALTRIFEACNKNPQPLIDSVLTNLGD 76
+LE GN +++ QS+ +RL + G + L + + +P I + +
Sbjct: 488 NLELGNYPDDLESNNQSLYNRLTKIIGSWKLENSKLEEVCGTMSDSPMATILLKSDEMTN 547
Query: 77 KFTQHYSAS-GDTARDFAEK-RLSVAVCL---YYKLLESILADEQKKPAYDFNVL--LSL 129
KF + SA G+T + K +V L + +E I+ E KK + ++L +
Sbjct: 548 KFERTLSAELGETINENIPKYHYNVRKELELVFLIFMEKIIVAELKKKVREEDLLNVIRR 607
Query: 130 QIFHETLFACCIEIVIFCYN-SNSFPWILSVLGIEPYHFYKVIEWLLT 176
+ F +++F C+E+++ FPW + G+ P+ F+KVI+ ++T
Sbjct: 608 EEFLDSVFCFCVELILVSNGYDRPFPWSAELCGVHPFMFHKVIDLMIT 655
>UNIPROTKB|G5EDT1 [details] [associations]
symbol:lin-35 "Synthetic multivulva protein LIN-35 Rb"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002719 InterPro:IPR002720 Pfam:PF01857
Pfam:PF01858 GO:GO:0005634 GO:GO:0009792 GO:GO:0002009
GO:GO:0040007 GO:GO:0018991 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040018 Gene3D:1.10.472.10 InterPro:IPR013763
SUPFAM:SSF47954 GO:GO:0040027 GO:GO:0071850 GO:GO:0048557
EMBL:FO080198 GO:GO:0016479 GeneTree:ENSGT00530000063235 KO:K04681
InterPro:IPR024599 Pfam:PF11934 HSSP:P06400 EMBL:AF116529
PIR:T34024 RefSeq:NP_491686.1 UniGene:Cel.5952
ProteinModelPortal:G5EDT1 SMR:G5EDT1 IntAct:G5EDT1
EnsemblMetazoa:C32F10.2 GeneID:172249 KEGG:cel:CELE_C32F10.2
CTD:172249 WormBase:C32F10.2 OMA:PWILNAL NextBio:874671
Uniprot:G5EDT1
Length = 961
Score = 118 (46.6 bits), Expect = 0.00017, P = 0.00017
Identities = 41/168 (24%), Positives = 80/168 (47%)
Query: 19 DLEYGNVTP-VKTATQSI-SRLNLLCGRDPNPSPALTRIFEACNKNPQPLIDSVLTNLGD 76
+LE GN +++ QS+ +RL + G + L + + +P I + +
Sbjct: 488 NLELGNYPDDLESNNQSLYNRLTKIIGSWKLENSKLEEVCGTMSDSPMATILLKSDEMTN 547
Query: 77 KFTQHYSAS-GDTARDFAEK-RLSVAVCL---YYKLLESILADEQKKPAYDFNVL--LSL 129
KF + SA G+T + K +V L + +E I+ E KK + ++L +
Sbjct: 548 KFERTLSAELGETINENIPKYHYNVRKELELVFLIFMEKIIVAELKKKVREEDLLNVIRR 607
Query: 130 QIFHETLFACCIEIVIFCYN-SNSFPWILSVLGIEPYHFYKVIEWLLT 176
+ F +++F C+E+++ FPW + G+ P+ F+KVI+ ++T
Sbjct: 608 EEFLDSVFCFCVELILVSNGYDRPFPWSAELCGVHPFMFHKVIDLMIT 655
>FB|FBgn0038390 [details] [associations]
symbol:Rbf2 "Retinoblastoma-family protein 2" species:7227
"Drosophila melanogaster" [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0001078 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=IPI] [GO:0035189 "Rb-E2F complex"
evidence=IDA;TAS] [GO:0045749 "negative regulation of S phase of
mitotic cell cycle" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0031523 "Myb complex" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IDA] InterPro:IPR002719
InterPro:IPR002720 Pfam:PF01857 Pfam:PF01858 EMBL:AE014297
GO:GO:0000122 GO:GO:0044212 GO:GO:0045749 Gene3D:1.10.472.10
InterPro:IPR013763 SUPFAM:SSF47954 GO:GO:0031523 GO:GO:0035189
GeneTree:ENSGT00530000063235 KO:K04681 InterPro:IPR024599
Pfam:PF11934 HSSP:P06400 FlyBase:FBgn0038390 EMBL:AF197059
EMBL:AY071301 RefSeq:NP_524372.1 UniGene:Dm.2418 SMR:Q9VF04
IntAct:Q9VF04 STRING:Q9VF04 EnsemblMetazoa:FBtr0083213 GeneID:41941
KEGG:dme:Dmel_CG5083 UCSC:CG5083-RA CTD:41941 InParanoid:Q9VF04
OMA:ICLRKFY GenomeRNAi:41941 NextBio:826382 Uniprot:Q9VF04
Length = 783
Score = 116 (45.9 bits), Expect = 0.00023, P = 0.00023
Identities = 33/122 (27%), Positives = 55/122 (45%)
Query: 67 IDSVLTNLGDKFTQHYSASGDTARDFAEKRLSVAVCLYYKLLESILADEQ-KKPAYDFNV 125
+D L + FT D + + KR A LYYK L+ IL E +KP
Sbjct: 390 LDQTLEEMNRTFTMAVKDFLDA--ELSGKRFRQARGLYYKYLQKILGPELVQKPQLKIGQ 447
Query: 126 LLSLQIFHETLFACCIEIVIFCYNSN----SFPWILSVLGIEPYHFYKVIEWLLTPNPEV 181
L+ + L ACC+E+ + ++ FP++L ++ Y F K++E ++ +
Sbjct: 448 LMKQRKLTAALLACCLELALHVHHKLVEGLRFPFVLHCFSLDAYDFQKILELVVRYDHGF 507
Query: 182 LG 183
LG
Sbjct: 508 LG 509
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.137 0.421 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 190 190 0.00091 110 3 11 22 0.44 32
31 0.42 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 44
No. of states in DFA: 603 (64 KB)
Total size of DFA: 171 KB (2100 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.26u 0.10s 18.36t Elapsed: 00:00:04
Total cpu time: 18.26u 0.10s 18.36t Elapsed: 00:00:04
Start: Thu Aug 15 16:07:23 2013 End: Thu Aug 15 16:07:27 2013