Query psy9486
Match_columns 165
No_of_seqs 202 out of 1452
Neff 6.9
Searched_HMMs 29240
Date Fri Aug 16 20:38:27 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9486.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9486hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2gmh_A Electron transfer flavo 99.9 3.6E-21 1.2E-25 171.7 14.7 160 1-160 78-237 (584)
2 3oz2_A Digeranylgeranylglycero 99.3 8.3E-12 2.8E-16 102.7 10.3 128 3-154 43-172 (397)
3 3cgv_A Geranylgeranyl reductas 98.9 4.1E-09 1.4E-13 87.3 10.0 102 33-154 69-172 (397)
4 3nix_A Flavoprotein/dehydrogen 98.9 6.3E-09 2.2E-13 87.2 11.1 104 34-154 73-176 (421)
5 3atr_A Conserved archaeal prot 98.8 3.1E-08 1.1E-12 84.8 10.5 75 60-145 93-167 (453)
6 3e1t_A Halogenase; flavoprotei 98.7 6.2E-08 2.1E-12 84.4 10.6 76 59-146 103-178 (512)
7 2weu_A Tryptophan 5-halogenase 98.6 1.7E-07 5.9E-12 81.1 9.5 71 59-145 165-235 (511)
8 2x3n_A Probable FAD-dependent 98.6 3.5E-07 1.2E-11 76.4 10.1 74 60-153 100-175 (399)
9 2pyx_A Tryptophan halogenase; 98.5 4.9E-07 1.7E-11 79.0 10.1 70 60-145 168-239 (526)
10 3dje_A Fructosyl amine: oxygen 98.5 6.1E-07 2.1E-11 75.8 9.6 63 62-140 156-221 (438)
11 2e4g_A Tryptophan halogenase; 98.5 4.6E-07 1.6E-11 79.7 9.2 69 60-144 187-256 (550)
12 3nyc_A D-arginine dehydrogenas 98.4 6.4E-07 2.2E-11 73.4 8.8 72 61-153 148-219 (381)
13 3dme_A Conserved exported prot 98.4 9.3E-07 3.2E-11 71.9 9.6 76 61-153 144-220 (369)
14 3i3l_A Alkylhalidase CMLS; fla 98.4 4.3E-07 1.5E-11 81.2 8.1 74 59-145 120-193 (591)
15 2aqj_A Tryptophan halogenase, 98.4 7E-07 2.4E-11 78.1 8.9 71 59-145 157-227 (538)
16 1y56_B Sarcosine oxidase; dehy 98.4 1.2E-06 4E-11 72.4 9.7 72 62-153 144-215 (382)
17 4at0_A 3-ketosteroid-delta4-5a 98.4 7.1E-07 2.4E-11 77.7 8.4 71 68-151 203-274 (510)
18 2qa2_A CABE, polyketide oxygen 98.3 1.5E-06 5.1E-11 75.8 9.0 76 60-153 100-175 (499)
19 2qa1_A PGAE, polyketide oxygen 98.3 1.3E-06 4.4E-11 76.3 8.6 76 60-153 99-174 (500)
20 1qo8_A Flavocytochrome C3 fuma 98.3 9.2E-07 3.1E-11 78.0 7.3 76 64-151 247-322 (566)
21 1y0p_A Fumarate reductase flav 98.3 1.8E-06 6E-11 76.2 8.8 75 65-151 253-327 (571)
22 3rp8_A Flavoprotein monooxygen 98.3 2.2E-06 7.6E-11 71.7 8.8 69 59-146 119-187 (407)
23 2i0z_A NAD(FAD)-utilizing dehy 98.3 3.5E-06 1.2E-10 72.1 10.1 72 66-153 133-211 (447)
24 3axb_A Putative oxidoreductase 98.3 1.6E-06 5.5E-11 73.5 7.8 77 61-156 175-267 (448)
25 3jsk_A Cypbp37 protein; octame 98.3 3.3E-06 1.1E-10 71.2 9.3 89 61-150 152-261 (344)
26 2gag_B Heterotetrameric sarcos 98.3 2E-06 6.7E-11 71.3 7.5 72 62-153 169-240 (405)
27 3ihg_A RDME; flavoenzyme, anth 98.3 2.2E-06 7.7E-11 74.7 8.2 79 59-153 112-192 (535)
28 1d4d_A Flavocytochrome C fumar 98.3 2.6E-06 8.8E-11 75.5 8.6 75 65-151 253-327 (572)
29 3alj_A 2-methyl-3-hydroxypyrid 98.2 3.2E-06 1.1E-10 70.2 8.7 65 61-145 101-165 (379)
30 1pj5_A N,N-dimethylglycine oxi 98.2 4.3E-06 1.5E-10 76.9 10.1 74 61-154 145-218 (830)
31 3fmw_A Oxygenase; mithramycin, 98.2 9.4E-07 3.2E-11 78.5 5.5 76 59-153 140-216 (570)
32 2oln_A NIKD protein; flavoprot 98.2 5.1E-06 1.7E-10 69.1 9.4 71 61-152 147-217 (397)
33 1k0i_A P-hydroxybenzoate hydro 98.2 2.9E-06 9.9E-11 70.5 7.8 97 35-146 73-169 (394)
34 1ryi_A Glycine oxidase; flavop 98.2 2.5E-06 8.7E-11 70.2 7.3 71 62-153 159-229 (382)
35 3nlc_A Uncharacterized protein 98.1 1.1E-05 3.8E-10 71.7 9.6 73 65-153 218-290 (549)
36 4dgk_A Phytoene dehydrogenase; 98.1 8.1E-06 2.8E-10 69.9 8.4 60 67-142 221-280 (501)
37 3c4n_A Uncharacterized protein 98.1 2.8E-06 9.4E-11 71.6 5.3 73 61-154 166-248 (405)
38 3da1_A Glycerol-3-phosphate de 98.1 8E-06 2.8E-10 72.3 8.5 77 63-153 166-242 (561)
39 2gf3_A MSOX, monomeric sarcosi 98.1 1.3E-05 4.5E-10 66.0 9.0 69 62-151 145-213 (389)
40 1rp0_A ARA6, thiazole biosynth 98.1 2.3E-05 7.7E-10 63.1 10.2 77 60-144 110-195 (284)
41 2cul_A Glucose-inhibited divis 98.0 1.3E-05 4.4E-10 62.6 7.4 60 65-141 66-126 (232)
42 2rgh_A Alpha-glycerophosphate 98.0 1.6E-05 5.6E-10 70.4 8.5 75 64-152 185-259 (571)
43 3ps9_A TRNA 5-methylaminomethy 98.0 2.2E-05 7.6E-10 70.5 9.2 64 61-141 411-474 (676)
44 2uzz_A N-methyl-L-tryptophan o 98.0 3.7E-05 1.3E-09 63.0 9.4 62 61-140 143-204 (372)
45 2gjc_A Thiazole biosynthetic e 97.9 2.5E-05 8.6E-10 65.3 8.0 90 60-150 137-249 (326)
46 2dkh_A 3-hydroxybenzoate hydro 97.9 2E-05 6.7E-10 70.7 7.7 84 59-153 133-220 (639)
47 2wdq_A Succinate dehydrogenase 97.9 2.5E-05 8.5E-10 69.6 8.1 66 67-142 143-208 (588)
48 4hb9_A Similarities with proba 97.9 3.2E-05 1.1E-09 63.6 7.9 69 59-146 104-172 (412)
49 2qcu_A Aerobic glycerol-3-phos 97.9 7.4E-05 2.5E-09 64.8 9.9 72 63-149 145-216 (501)
50 3pvc_A TRNA 5-methylaminomethy 97.8 4.8E-05 1.6E-09 68.6 8.7 64 61-141 406-470 (689)
51 2h88_A Succinate dehydrogenase 97.8 3.9E-05 1.3E-09 69.0 7.3 65 67-142 155-219 (621)
52 3v76_A Flavoprotein; structura 97.8 7.2E-05 2.4E-09 63.9 8.7 71 65-153 130-207 (417)
53 3p1w_A Rabgdi protein; GDI RAB 97.8 5.2E-05 1.8E-09 66.3 7.6 58 67-139 256-313 (475)
54 3c96_A Flavin-containing monoo 97.8 7.6E-05 2.6E-09 62.5 8.3 74 60-146 100-175 (410)
55 2bs2_A Quinol-fumarate reducta 97.8 5.8E-05 2E-09 68.3 8.0 65 67-142 158-222 (660)
56 3ka7_A Oxidoreductase; structu 97.8 6.7E-05 2.3E-09 62.6 7.9 58 67-141 196-253 (425)
57 2xdo_A TETX2 protein; tetracyc 97.7 5.4E-05 1.8E-09 63.2 6.0 67 60-145 121-187 (398)
58 2r0c_A REBC; flavin adenine di 97.7 0.00013 4.6E-09 64.0 8.6 72 59-145 130-201 (549)
59 2vou_A 2,6-dihydroxypyridine h 97.7 0.00015 5.3E-09 60.4 8.6 67 62-147 94-160 (397)
60 2ywl_A Thioredoxin reductase r 97.7 0.00013 4.3E-09 54.1 7.3 67 64-153 53-119 (180)
61 2zxi_A TRNA uridine 5-carboxym 97.6 0.00016 5.4E-09 65.4 8.5 62 62-140 118-180 (637)
62 3fg2_P Putative rubredoxin red 97.6 0.00031 1.1E-08 58.9 9.7 70 67-154 184-253 (404)
63 3ces_A MNMG, tRNA uridine 5-ca 97.6 0.00015 5.2E-09 65.7 8.2 63 62-141 119-182 (651)
64 1kf6_A Fumarate reductase flav 97.6 0.00012 4E-09 65.4 7.3 65 67-142 134-199 (602)
65 3lxd_A FAD-dependent pyridine 97.6 0.00039 1.3E-08 58.4 10.1 70 67-154 194-263 (415)
66 3gyx_A Adenylylsulfate reducta 97.6 7.8E-05 2.7E-09 67.5 6.0 70 63-142 162-235 (662)
67 1pn0_A Phenol 2-monooxygenase; 97.6 0.00016 5.4E-09 65.3 7.7 87 59-145 111-235 (665)
68 2gqf_A Hypothetical protein HI 97.6 0.00027 9.1E-09 59.9 8.7 72 65-153 107-188 (401)
69 1chu_A Protein (L-aspartate ox 97.5 8E-05 2.7E-09 65.6 5.3 66 67-142 138-210 (540)
70 2e5v_A L-aspartate oxidase; ar 97.5 0.00024 8.2E-09 61.4 7.5 61 66-142 118-178 (472)
71 3cp8_A TRNA uridine 5-carboxym 97.5 0.00033 1.1E-08 63.4 8.5 63 61-140 111-174 (641)
72 4a9w_A Monooxygenase; baeyer-v 97.5 0.00031 1.1E-08 56.4 7.4 62 62-140 71-132 (357)
73 1jnr_A Adenylylsulfate reducta 97.4 0.00023 7.8E-09 64.0 7.0 66 66-142 150-220 (643)
74 2bry_A NEDD9 interacting prote 97.4 0.00016 5.4E-09 62.9 5.7 73 62-144 161-234 (497)
75 2bcg_G Secretory pathway GDP d 97.4 0.00044 1.5E-08 59.1 7.9 58 67-140 242-300 (453)
76 1d5t_A Guanine nucleotide diss 97.3 0.00037 1.3E-08 59.3 6.6 58 67-141 234-291 (433)
77 1mo9_A ORF3; nucleotide bindin 97.3 0.001 3.4E-08 58.0 8.9 71 67-153 255-328 (523)
78 3c4a_A Probable tryptophan hyd 97.2 0.0001 3.5E-09 61.3 1.6 65 60-153 91-155 (381)
79 1q1r_A Putidaredoxin reductase 97.1 0.0019 6.6E-08 54.8 9.0 69 68-153 192-261 (431)
80 3nrn_A Uncharacterized protein 97.0 0.0008 2.7E-08 56.3 5.4 56 67-141 189-244 (421)
81 3ef6_A Toluene 1,2-dioxygenase 97.0 0.0017 5.9E-08 54.6 7.4 68 68-154 186-253 (410)
82 1vg0_A RAB proteins geranylger 97.0 0.0036 1.2E-07 56.7 9.6 62 61-137 369-434 (650)
83 3iwa_A FAD-dependent pyridine 96.9 0.0035 1.2E-07 53.5 9.0 67 68-153 203-269 (472)
84 3gwf_A Cyclohexanone monooxyge 96.9 0.0035 1.2E-07 55.1 9.0 64 62-140 82-147 (540)
85 3ab1_A Ferredoxin--NADP reduct 96.8 0.0049 1.7E-07 50.2 8.6 63 64-142 71-133 (360)
86 1n4w_A CHOD, cholesterol oxida 96.8 0.0012 4E-08 57.4 4.9 62 72-141 226-289 (504)
87 2hqm_A GR, grase, glutathione 96.8 0.0031 1.1E-07 54.2 7.5 69 68-153 227-297 (479)
88 2v3a_A Rubredoxin reductase; a 96.8 0.0054 1.8E-07 50.9 8.6 68 67-153 187-254 (384)
89 1coy_A Cholesterol oxidase; ox 96.7 0.0021 7.1E-08 55.9 5.6 71 71-151 230-302 (507)
90 1m6i_A Programmed cell death p 96.6 0.0064 2.2E-07 52.5 8.0 67 68-153 227-293 (493)
91 3d1c_A Flavin-containing putat 96.6 0.0073 2.5E-07 48.9 7.9 59 64-140 85-143 (369)
92 4ap3_A Steroid monooxygenase; 96.5 0.0063 2.1E-07 53.6 7.8 63 63-140 95-159 (549)
93 1kdg_A CDH, cellobiose dehydro 96.5 0.003 1E-07 55.1 5.6 69 71-152 199-271 (546)
94 1w4x_A Phenylacetone monooxyge 96.5 0.0077 2.6E-07 52.6 8.0 63 63-140 90-154 (542)
95 2zbw_A Thioredoxin reductase; 96.5 0.012 4E-07 47.1 8.6 61 64-141 62-122 (335)
96 1fec_A Trypanothione reductase 96.5 0.0069 2.4E-07 52.2 7.5 69 68-153 232-301 (490)
97 2jbv_A Choline oxidase; alcoho 96.4 0.0015 5.2E-08 57.4 3.2 59 72-140 213-273 (546)
98 3o0h_A Glutathione reductase; 96.4 0.0096 3.3E-07 51.0 8.1 58 68-142 233-290 (484)
99 3lzw_A Ferredoxin--NADP reduct 96.4 0.014 4.6E-07 46.3 8.3 60 64-140 64-123 (332)
100 2wpf_A Trypanothione reductase 96.4 0.011 3.7E-07 51.1 8.3 69 68-153 236-305 (495)
101 1vdc_A NTR, NADPH dependent th 96.4 0.0081 2.8E-07 48.1 6.9 61 63-142 66-126 (333)
102 1fl2_A Alkyl hydroperoxide red 96.3 0.009 3.1E-07 47.3 7.0 63 64-141 53-116 (310)
103 3nks_A Protoporphyrinogen oxid 96.3 0.0047 1.6E-07 52.1 5.6 56 68-140 235-290 (477)
104 1ges_A Glutathione reductase; 96.3 0.0087 3E-07 50.9 7.2 69 68-153 209-278 (450)
105 3cgb_A Pyridine nucleotide-dis 96.3 0.017 5.8E-07 49.5 9.0 66 68-153 228-293 (480)
106 3oc4_A Oxidoreductase, pyridin 96.3 0.013 4.4E-07 49.7 8.1 57 68-142 190-246 (452)
107 2cdu_A NADPH oxidase; flavoenz 96.3 0.01 3.4E-07 50.4 7.4 58 68-142 192-249 (452)
108 2q0l_A TRXR, thioredoxin reduc 96.3 0.013 4.3E-07 46.4 7.4 62 63-142 55-116 (311)
109 3qvp_A Glucose oxidase; oxidor 96.3 0.0045 1.6E-07 55.2 5.2 62 68-140 228-293 (583)
110 1zk7_A HGII, reductase, mercur 96.3 0.014 5E-07 49.6 8.2 68 68-153 217-284 (467)
111 1ju2_A HydroxynitrIle lyase; f 96.2 0.0017 5.8E-08 57.0 2.4 66 73-151 200-270 (536)
112 3cty_A Thioredoxin reductase; 96.2 0.01 3.6E-07 47.3 6.9 70 71-153 194-263 (319)
113 3uox_A Otemo; baeyer-villiger 96.2 0.011 3.8E-07 52.0 7.3 64 62-140 82-147 (545)
114 2xve_A Flavin-containing monoo 96.2 0.013 4.4E-07 50.2 7.5 68 63-140 97-166 (464)
115 1v59_A Dihydrolipoamide dehydr 96.1 0.013 4.5E-07 49.9 7.3 76 68-153 225-300 (478)
116 1xdi_A RV3303C-LPDA; reductase 96.1 0.017 5.8E-07 49.7 8.0 58 68-142 224-281 (499)
117 3ab1_A Ferredoxin--NADP reduct 96.1 0.017 5.7E-07 46.9 7.5 71 69-153 204-274 (360)
118 1gpe_A Protein (glucose oxidas 96.1 0.0022 7.4E-08 57.0 2.3 60 70-140 234-297 (587)
119 4dna_A Probable glutathione re 96.1 0.014 4.8E-07 49.6 7.2 58 68-142 212-270 (463)
120 1trb_A Thioredoxin reductase; 96.0 0.026 9E-07 44.7 8.3 64 68-142 185-249 (320)
121 2gqw_A Ferredoxin reductase; f 96.0 0.025 8.4E-07 47.5 8.3 63 68-153 188-250 (408)
122 2yqu_A 2-oxoglutarate dehydrog 96.0 0.02 7E-07 48.5 7.7 59 67-142 208-266 (455)
123 2r9z_A Glutathione amide reduc 95.9 0.02 6.8E-07 48.9 7.5 68 68-153 208-277 (463)
124 3f8d_A Thioredoxin reductase ( 95.9 0.021 7.3E-07 44.9 7.2 60 64-141 67-126 (323)
125 2vvm_A Monoamine oxidase N; FA 95.9 0.022 7.4E-07 48.5 7.5 57 67-140 255-312 (495)
126 1y56_A Hypothetical protein PH 95.8 0.014 4.6E-07 50.5 5.9 60 75-153 265-324 (493)
127 1onf_A GR, grase, glutathione 95.8 0.032 1.1E-06 48.1 8.2 59 68-142 218-277 (500)
128 2q7v_A Thioredoxin reductase; 95.7 0.02 6.7E-07 45.8 6.4 63 63-141 61-124 (325)
129 3s5w_A L-ornithine 5-monooxyge 95.7 0.01 3.4E-07 50.2 4.8 69 63-142 123-194 (463)
130 3g3e_A D-amino-acid oxidase; F 95.6 0.0021 7.3E-08 52.2 0.3 51 61-140 136-186 (351)
131 3ntd_A FAD-dependent pyridine 95.6 0.045 1.5E-06 47.4 8.7 69 67-153 192-278 (565)
132 1c0p_A D-amino acid oxidase; a 95.6 0.0035 1.2E-07 51.2 1.4 50 61-140 136-185 (363)
133 2zbw_A Thioredoxin reductase; 95.5 0.052 1.8E-06 43.3 8.2 72 68-153 192-263 (335)
134 1hyu_A AHPF, alkyl hydroperoxi 95.5 0.021 7.3E-07 49.6 6.1 62 64-140 264-326 (521)
135 3fim_B ARYL-alcohol oxidase; A 95.4 0.0079 2.7E-07 53.4 3.0 61 68-139 209-275 (566)
136 3cty_A Thioredoxin reductase; 95.3 0.04 1.4E-06 43.8 6.6 60 63-141 68-127 (319)
137 3ics_A Coenzyme A-disulfide re 95.2 0.061 2.1E-06 47.1 8.1 66 67-153 228-293 (588)
138 2gv8_A Monooxygenase; FMO, FAD 95.2 0.039 1.3E-06 46.6 6.6 67 63-140 111-177 (447)
139 3itj_A Thioredoxin reductase 1 95.2 0.055 1.9E-06 42.8 7.2 64 63-141 80-143 (338)
140 3r9u_A Thioredoxin reductase; 95.2 0.039 1.3E-06 43.3 6.2 54 77-142 193-246 (315)
141 3itj_A Thioredoxin reductase 1 95.1 0.054 1.8E-06 42.9 7.0 61 71-142 212-273 (338)
142 1zmd_A Dihydrolipoyl dehydroge 95.1 0.051 1.7E-06 46.2 7.1 65 67-142 220-284 (474)
143 1nhp_A NADH peroxidase; oxidor 95.1 0.032 1.1E-06 47.1 5.7 58 67-142 191-248 (447)
144 3k7m_X 6-hydroxy-L-nicotine ox 95.0 0.027 9.1E-07 46.8 5.0 51 70-138 207-257 (431)
145 3dgh_A TRXR-1, thioredoxin red 95.0 0.063 2.2E-06 45.8 7.5 64 68-142 228-291 (483)
146 3pl8_A Pyranose 2-oxidase; sub 94.9 0.042 1.4E-06 49.1 6.2 63 80-154 273-336 (623)
147 3q9t_A Choline dehydrogenase a 94.9 0.021 7.1E-07 50.8 4.2 52 78-140 217-270 (577)
148 1yvv_A Amine oxidase, flavin-c 94.8 0.046 1.6E-06 43.5 5.8 45 81-142 119-164 (336)
149 2a87_A TRXR, TR, thioredoxin r 94.8 0.043 1.5E-06 44.1 5.6 61 63-142 67-128 (335)
150 2bc0_A NADH oxidase; flavoprot 94.8 0.048 1.6E-06 46.8 6.1 57 68-142 237-293 (490)
151 1fl2_A Alkyl hydroperoxide red 94.8 0.046 1.6E-06 43.1 5.6 61 70-141 182-243 (310)
152 2qae_A Lipoamide, dihydrolipoy 94.8 0.096 3.3E-06 44.4 7.9 62 68-142 216-278 (468)
153 1trb_A Thioredoxin reductase; 94.7 0.072 2.4E-06 42.1 6.7 60 64-142 59-118 (320)
154 1xhc_A NADH oxidase /nitrite r 94.7 0.047 1.6E-06 45.2 5.7 63 67-153 183-245 (367)
155 1b37_A Protein (polyamine oxid 94.5 0.052 1.8E-06 46.0 5.7 55 68-139 207-269 (472)
156 3fbs_A Oxidoreductase; structu 94.5 0.075 2.6E-06 41.2 6.1 62 63-142 52-114 (297)
157 1s3e_A Amine oxidase [flavin-c 94.3 0.053 1.8E-06 46.5 5.4 53 71-140 216-268 (520)
158 3f8d_A Thioredoxin reductase ( 94.3 0.12 4.2E-06 40.4 7.1 67 73-153 195-262 (323)
159 3dk9_A Grase, GR, glutathione 94.3 0.18 6.2E-06 42.8 8.7 77 68-153 229-306 (478)
160 2eq6_A Pyruvate dehydrogenase 94.3 0.14 4.8E-06 43.5 7.9 75 67-153 210-284 (464)
161 3lad_A Dihydrolipoamide dehydr 94.3 0.095 3.2E-06 44.5 6.8 61 68-142 222-282 (476)
162 3qj4_A Renalase; FAD/NAD(P)-bi 94.3 0.085 2.9E-06 42.5 6.2 53 70-139 112-164 (342)
163 4b63_A L-ornithine N5 monooxyg 93.9 0.11 3.6E-06 45.0 6.4 71 61-141 139-215 (501)
164 3h8l_A NADH oxidase; membrane 93.8 0.12 4.1E-06 42.8 6.3 54 67-141 218-271 (409)
165 3fbs_A Oxidoreductase; structu 93.7 0.074 2.5E-06 41.3 4.6 62 69-153 176-237 (297)
166 3urh_A Dihydrolipoyl dehydroge 93.3 0.34 1.2E-05 41.3 8.5 73 68-153 240-313 (491)
167 1ebd_A E3BD, dihydrolipoamide 93.2 0.22 7.6E-06 42.0 7.2 61 68-142 212-272 (455)
168 2q7v_A Thioredoxin reductase; 93.2 0.23 7.9E-06 39.4 6.9 60 71-142 191-251 (325)
169 2ivd_A PPO, PPOX, protoporphyr 93.1 0.084 2.9E-06 44.4 4.4 58 66-140 234-294 (478)
170 3i6d_A Protoporphyrinogen oxid 93.1 0.14 4.9E-06 42.5 5.8 42 82-140 248-289 (470)
171 2vdc_G Glutamate synthase [NAD 93.0 0.058 2E-06 46.3 3.3 78 74-153 309-391 (456)
172 2q0l_A TRXR, thioredoxin reduc 92.9 0.26 9E-06 38.6 6.8 61 71-142 182-243 (311)
173 2a8x_A Dihydrolipoyl dehydroge 92.8 0.38 1.3E-05 40.7 8.0 61 68-142 213-273 (464)
174 2yg5_A Putrescine oxidase; oxi 92.7 0.14 4.7E-06 42.8 5.2 47 76-139 221-267 (453)
175 2b9w_A Putative aminooxidase; 92.5 0.26 8.8E-06 40.7 6.5 51 72-140 208-258 (424)
176 1dxl_A Dihydrolipoamide dehydr 92.5 0.21 7.1E-06 42.2 6.0 63 68-142 219-281 (470)
177 3lov_A Protoporphyrinogen oxid 92.4 0.22 7.4E-06 41.9 6.0 61 62-140 228-289 (475)
178 1cjc_A Protein (adrenodoxin re 92.4 0.24 8.2E-06 42.4 6.4 67 69-142 245-335 (460)
179 1gte_A Dihydropyrimidine dehyd 92.4 0.22 7.5E-06 47.0 6.5 76 74-153 377-455 (1025)
180 3dgz_A Thioredoxin reductase 2 92.3 0.44 1.5E-05 40.6 7.9 74 68-153 226-300 (488)
181 3k30_A Histamine dehydrogenase 92.3 0.067 2.3E-06 48.0 2.8 57 70-142 570-626 (690)
182 3kd9_A Coenzyme A disulfide re 92.3 0.32 1.1E-05 40.9 6.9 65 68-153 191-255 (449)
183 3lzw_A Ferredoxin--NADP reduct 92.2 0.32 1.1E-05 38.3 6.4 66 74-153 196-261 (332)
184 1vdc_A NTR, NADPH dependent th 92.1 0.33 1.1E-05 38.4 6.5 61 71-142 198-261 (333)
185 3t37_A Probable dehydrogenase; 91.9 0.13 4.3E-06 44.1 3.9 69 68-151 211-280 (526)
186 4b1b_A TRXR, thioredoxin reduc 91.8 0.61 2.1E-05 41.0 8.3 59 68-143 264-322 (542)
187 3s5w_A L-ornithine 5-monooxyge 91.6 0.43 1.5E-05 40.0 6.9 50 80-141 329-378 (463)
188 1ojt_A Surface protein; redox- 91.5 0.35 1.2E-05 41.2 6.3 72 68-153 227-299 (482)
189 1lvl_A Dihydrolipoamide dehydr 91.4 0.22 7.5E-06 42.2 4.9 59 67-142 212-270 (458)
190 4g6h_A Rotenone-insensitive NA 91.2 0.57 2E-05 40.5 7.5 60 68-140 273-332 (502)
191 4fk1_A Putative thioredoxin re 91.2 0.49 1.7E-05 37.4 6.5 61 64-140 57-117 (304)
192 4eqs_A Coenzyme A disulfide re 91.1 0.44 1.5E-05 40.2 6.5 61 70-153 191-251 (437)
193 3klj_A NAD(FAD)-dependent dehy 91.0 0.4 1.4E-05 39.9 6.0 48 74-140 69-116 (385)
194 3r9u_A Thioredoxin reductase; 90.6 0.41 1.4E-05 37.3 5.5 60 63-140 58-118 (315)
195 1hyu_A AHPF, alkyl hydroperoxi 90.2 0.45 1.5E-05 41.2 5.9 60 71-141 394-454 (521)
196 3ic9_A Dihydrolipoamide dehydr 89.8 1 3.5E-05 38.5 7.8 61 68-142 216-276 (492)
197 4gde_A UDP-galactopyranose mut 89.6 0.24 8.1E-06 41.8 3.5 52 67-137 222-273 (513)
198 1rsg_A FMS1 protein; FAD bindi 89.4 0.65 2.2E-05 39.7 6.2 55 69-139 201-256 (516)
199 2jae_A L-amino acid oxidase; o 89.3 0.74 2.5E-05 38.8 6.4 50 76-139 245-295 (489)
200 1q1r_A Putidaredoxin reductase 89.2 0.42 1.4E-05 40.2 4.8 49 75-142 68-116 (431)
201 3vrd_B FCCB subunit, flavocyto 89.2 0.29 1E-05 40.2 3.7 67 67-153 198-268 (401)
202 2a8x_A Dihydrolipoyl dehydroge 88.7 0.67 2.3E-05 39.1 5.7 56 69-142 93-148 (464)
203 3qfa_A Thioredoxin reductase 1 88.4 1.8 6E-05 37.3 8.3 65 67-142 250-317 (519)
204 4gut_A Lysine-specific histone 88.2 0.82 2.8E-05 42.0 6.3 42 80-138 542-583 (776)
205 3d1c_A Flavin-containing putat 88.0 1.2 4.2E-05 35.5 6.7 55 71-142 218-274 (369)
206 1dxl_A Dihydrolipoamide dehydr 87.8 0.88 3E-05 38.3 5.9 55 70-142 99-153 (470)
207 3h28_A Sulfide-quinone reducta 87.2 1 3.5E-05 37.5 5.9 55 69-140 202-256 (430)
208 4a5l_A Thioredoxin reductase; 87.1 2.3 7.8E-05 33.1 7.6 60 63-140 62-121 (314)
209 1lqt_A FPRA; NADP+ derivative, 87.0 0.53 1.8E-05 40.1 4.1 70 70-142 249-328 (456)
210 3uox_A Otemo; baeyer-villiger 86.7 0.61 2.1E-05 40.8 4.3 45 74-140 345-391 (545)
211 3l8k_A Dihydrolipoyl dehydroge 86.7 1.5 5E-05 37.1 6.6 59 81-153 225-284 (466)
212 1ebd_A E3BD, dihydrolipoamide 86.6 1.3 4.5E-05 37.2 6.2 54 69-142 93-147 (455)
213 1v59_A Dihydrolipoamide dehydr 86.5 0.82 2.8E-05 38.6 5.0 51 72-140 101-157 (478)
214 4fk1_A Putative thioredoxin re 86.1 1.3 4.3E-05 34.9 5.6 64 71-153 184-247 (304)
215 3hyw_A Sulfide-quinone reducta 85.8 1.6 5.3E-05 36.6 6.3 54 70-140 203-256 (430)
216 1ojt_A Surface protein; redox- 85.6 1 3.4E-05 38.3 5.1 58 72-142 100-162 (482)
217 2gag_A Heterotetrameric sarcos 85.5 1.4 4.8E-05 41.2 6.4 60 74-142 323-385 (965)
218 3ihm_A Styrene monooxygenase A 85.0 0.29 9.8E-06 41.1 1.4 53 61-142 116-169 (430)
219 2a87_A TRXR, TR, thioredoxin r 84.6 0.83 2.8E-05 36.4 3.9 59 72-142 195-254 (335)
220 2bc0_A NADH oxidase; flavoprot 84.0 1.5 5E-05 37.4 5.4 52 74-141 99-150 (490)
221 2x8g_A Thioredoxin glutathione 82.9 4.4 0.00015 35.3 8.1 63 68-142 327-397 (598)
222 3sx6_A Sulfide-quinone reducta 82.6 1.6 5.6E-05 36.4 5.1 54 68-141 60-113 (437)
223 2gqw_A Ferredoxin reductase; f 82.3 1.1 3.7E-05 37.3 3.8 47 76-141 68-114 (408)
224 3gwf_A Cyclohexanone monooxyge 82.0 0.73 2.5E-05 40.2 2.8 42 79-141 342-385 (540)
225 3ef6_A Toluene 1,2-dioxygenase 81.4 1.8 6.2E-05 35.9 4.9 45 77-140 67-111 (410)
226 1ps9_A 2,4-dienoyl-COA reducta 81.4 2.4 8.3E-05 37.7 5.9 53 72-142 578-630 (671)
227 1sez_A Protoporphyrinogen oxid 81.0 1.7 5.9E-05 36.6 4.7 61 69-139 242-307 (504)
228 3oc4_A Oxidoreductase, pyridin 81.0 2.1 7.3E-05 35.8 5.2 53 73-141 64-116 (452)
229 1xhc_A NADH oxidase /nitrite r 80.6 1.5 5.2E-05 35.9 4.1 45 76-140 69-113 (367)
230 2v3a_A Rubredoxin reductase; a 80.1 2.5 8.4E-05 34.5 5.2 49 73-141 66-114 (384)
231 3lxd_A FAD-dependent pyridine 77.6 3.1 0.00011 34.3 5.1 48 74-140 72-119 (415)
232 3ics_A Coenzyme A-disulfide re 77.5 3.1 0.00011 36.1 5.3 56 71-140 97-152 (588)
233 2iid_A L-amino-acid oxidase; f 77.5 4.7 0.00016 33.8 6.3 56 68-139 242-297 (498)
234 1xdi_A RV3303C-LPDA; reductase 77.1 4.7 0.00016 34.2 6.2 57 69-141 97-157 (499)
235 1nhp_A NADH peroxidase; oxidor 77.0 3.2 0.00011 34.6 5.1 53 75-141 64-116 (447)
236 3sx6_A Sulfide-quinone reducta 76.9 6.3 0.00022 32.8 6.9 60 69-140 210-269 (437)
237 3kd9_A Coenzyme A disulfide re 76.5 4.7 0.00016 33.6 6.0 44 78-140 70-114 (449)
238 2qae_A Lipoamide, dihydrolipoy 76.5 4 0.00014 34.3 5.6 52 72-141 98-149 (468)
239 4ap3_A Steroid monooxygenase; 76.3 1.6 5.3E-05 38.2 3.0 40 80-141 356-397 (549)
240 3cgb_A Pyridine nucleotide-dis 76.1 4.4 0.00015 34.3 5.7 50 78-141 104-153 (480)
241 3h8l_A NADH oxidase; membrane 75.8 2.6 9E-05 34.6 4.2 53 73-141 62-114 (409)
242 3l8k_A Dihydrolipoyl dehydroge 75.8 3 0.0001 35.1 4.6 50 71-140 93-144 (466)
243 2cdu_A NADPH oxidase; flavoenz 75.8 2.8 9.7E-05 35.0 4.4 54 74-141 65-118 (452)
244 1y56_A Hypothetical protein PH 75.5 2.5 8.7E-05 36.1 4.1 61 65-140 159-219 (493)
245 2hqm_A GR, grase, glutathione 74.5 4.1 0.00014 34.5 5.1 55 69-141 107-161 (479)
246 3iwa_A FAD-dependent pyridine 74.4 2.9 9.8E-05 35.2 4.1 57 70-140 69-125 (472)
247 3ntd_A FAD-dependent pyridine 74.2 4.1 0.00014 34.9 5.1 54 73-140 64-117 (565)
248 1m6i_A Programmed cell death p 73.8 1.9 6.4E-05 36.9 2.8 45 78-141 101-145 (493)
249 3klj_A NAD(FAD)-dependent dehy 73.6 0.96 3.3E-05 37.5 0.9 54 68-153 189-242 (385)
250 1zmd_A Dihydrolipoyl dehydroge 73.2 6.6 0.00023 32.9 6.1 52 73-142 103-154 (474)
251 2yqu_A 2-oxoglutarate dehydrog 72.0 4.8 0.00016 33.7 4.9 49 72-141 94-142 (455)
252 3hyw_A Sulfide-quinone reducta 71.3 4.4 0.00015 33.7 4.5 44 77-140 66-109 (430)
253 4eqs_A Coenzyme A disulfide re 69.9 5.6 0.00019 33.3 4.9 50 77-140 67-116 (437)
254 1o94_A Tmadh, trimethylamine d 69.1 2.7 9.3E-05 37.9 2.9 67 71-142 575-648 (729)
255 3fg2_P Putative rubredoxin red 68.1 8.5 0.00029 31.5 5.6 46 75-140 65-110 (404)
256 2eq6_A Pyruvate dehydrogenase 68.0 12 0.00042 31.3 6.7 45 74-141 100-144 (464)
257 4gcm_A TRXR, thioredoxin reduc 67.1 14 0.00047 28.7 6.4 58 64-140 59-116 (312)
258 3h28_A Sulfide-quinone reducta 66.9 3.1 0.00011 34.5 2.7 48 74-141 63-110 (430)
259 1lvl_A Dihydrolipoamide dehydr 64.5 19 0.00066 30.0 7.2 45 73-140 102-146 (458)
260 2gag_A Heterotetrameric sarcos 63.3 10 0.00034 35.4 5.6 69 67-140 181-253 (965)
261 4a9w_A Monooxygenase; baeyer-v 63.1 7.9 0.00027 30.2 4.3 28 124-153 269-296 (357)
262 3vrd_B FCCB subunit, flavocyto 60.8 15 0.00052 29.7 5.7 44 77-140 65-108 (401)
263 3urh_A Dihydrolipoyl dehydroge 60.7 21 0.00073 30.0 6.8 49 73-139 121-169 (491)
264 1w4x_A Phenylacetone monooxyge 60.7 8.5 0.00029 33.1 4.3 40 80-141 351-392 (542)
265 2r9z_A Glutathione amide reduc 60.4 18 0.00063 30.2 6.3 48 71-141 96-143 (463)
266 1fec_A Trypanothione reductase 59.2 14 0.00049 31.2 5.5 56 72-141 108-164 (490)
267 3dk9_A Grase, GR, glutathione 57.5 18 0.00062 30.2 5.8 52 69-141 110-161 (478)
268 4dsg_A UDP-galactopyranose mut 57.4 12 0.00042 31.7 4.8 53 67-140 216-270 (484)
269 3qfa_A Thioredoxin reductase 1 56.6 22 0.00077 30.3 6.3 49 75-141 138-186 (519)
270 3o0h_A Glutathione reductase; 56.5 21 0.00073 29.9 6.1 53 68-141 115-167 (484)
271 3dgz_A Thioredoxin reductase 2 56.4 28 0.00094 29.3 6.8 50 74-141 111-160 (488)
272 1zk7_A HGII, reductase, mercur 54.4 13 0.00044 31.1 4.3 47 76-140 103-150 (467)
273 1ges_A Glutathione reductase; 53.6 26 0.0009 29.1 6.2 47 71-140 97-143 (450)
274 3lad_A Dihydrolipoamide dehydr 53.1 17 0.00059 30.3 4.9 50 73-140 105-154 (476)
275 2z3y_A Lysine-specific histone 52.8 20 0.0007 31.7 5.6 47 81-138 410-456 (662)
276 4dna_A Probable glutathione re 52.6 23 0.00079 29.5 5.6 53 68-141 94-146 (463)
277 2wpf_A Trypanothione reductase 51.5 22 0.00075 30.1 5.4 54 73-140 113-167 (495)
278 4a5l_A Thioredoxin reductase; 50.5 45 0.0015 25.4 6.7 53 79-142 200-252 (314)
279 1onf_A GR, grase, glutathione 48.2 19 0.00064 30.5 4.4 59 71-142 93-155 (500)
280 4b63_A L-ornithine N5 monooxyg 47.2 23 0.0008 30.1 4.9 20 123-142 392-411 (501)
281 3dgh_A TRXR-1, thioredoxin red 46.9 35 0.0012 28.5 5.9 48 75-141 116-163 (483)
282 2xag_A Lysine-specific histone 39.7 36 0.0012 31.5 5.1 47 81-138 581-627 (852)
283 2xve_A Flavin-containing monoo 38.1 31 0.0011 28.9 4.2 19 124-142 260-278 (464)
284 3ayj_A Pro-enzyme of L-phenyla 38.1 29 0.001 31.6 4.2 57 68-137 348-411 (721)
285 4b1b_A TRXR, thioredoxin reduc 35.2 78 0.0027 27.4 6.4 52 75-142 148-199 (542)
286 2x8g_A Thioredoxin glutathione 33.5 87 0.003 26.9 6.4 16 125-140 246-261 (598)
287 2vdc_G Glutamate synthase [NAD 32.6 9.5 0.00033 32.3 0.1 46 69-140 174-219 (456)
288 1mo9_A ORF3; nucleotide bindin 31.0 44 0.0015 28.4 4.0 42 78-141 146-187 (523)
289 1ps9_A 2,4-dienoyl-COA reducta 26.4 28 0.00097 30.7 2.0 24 68-91 426-449 (671)
290 1gte_A Dihydropyrimidine dehyd 21.2 13 0.00044 34.9 -1.3 48 68-139 239-286 (1025)
No 1
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.86 E-value=3.6e-21 Score=171.74 Aligned_cols=160 Identities=69% Similarity=1.224 Sum_probs=137.8
Q ss_pred CceeeeceecccchhhhccccccCCCCCcccceeceEEEEcCCceEEecCCCCCCCCCCCcEEEEhHHHHHHHHHHHHHC
Q psy9486 1 GHILSGAVIDPIALNELLPDWKDLGAPLNTPVQEDKFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAM 80 (165)
Q Consensus 1 ~h~lsG~~l~~~~l~el~P~~~~~~~p~~~~v~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~i~r~~~d~~L~~~A~~~ 80 (165)
+|+++|++|.+++|++|+|+|.+.+.|+.+.+..+.+.+++....+.+|+.+...+.+.++|+++|..|++||.++|++.
T Consensus 78 ~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~ 157 (584)
T 2gmh_A 78 AHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDRFGILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEAL 157 (584)
T ss_dssp TTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEEEEEEECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHT
T ss_pred CccccccccCHHHHHHHHHHHHhcCCceeeeechhheeeeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHc
Confidence 36789999999999999999988789988878888898888776677764322023456689999999999999999999
Q ss_pred CCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccchHHHhhcCCCCCCCCCC
Q psy9486 81 GVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLTKSLSSRFNLRGQCMSSG 160 (165)
Q Consensus 81 Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~~l~~~~gl~~~~~~~~ 160 (165)
||+|+++++|+++..+++++|+||.+.++|++++|+++++|++|.+++||+||+|+|++|.+.++|.+++|+.....|++
T Consensus 158 Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~~~~gl~~~~~p~~ 237 (584)
T 2gmh_A 158 GVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQT 237 (584)
T ss_dssp TCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTTTTSCCCC
T ss_pred CCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCchHHHHHHHHhCCCCCCCchh
Confidence 99999999999999975688999999988888899988899999999999999999999999999999999876555543
No 2
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.31 E-value=8.3e-12 Score=102.72 Aligned_cols=128 Identities=21% Similarity=0.232 Sum_probs=88.4
Q ss_pred eeeeceecccchhhhccccccCCCCCcccceeceEEEEcCCc--eEEecCCCCCCCCCCCcEEEEhHHHHHHHHHHHHHC
Q psy9486 3 ILSGAVIDPIALNELLPDWKDLGAPLNTPVQEDKFAYLTKSK--RIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAM 80 (165)
Q Consensus 3 ~lsG~~l~~~~l~el~P~~~~~~~p~~~~v~~~~~~~~~~~~--~l~i~~~~~~~~~~~~~~~i~r~~~d~~L~~~A~~~ 80 (165)
..+|+.|.++.|+++- +......+.+.+ .++.+.+++. .+..+... ..+..+|+++|..|+++|+++|++.
T Consensus 43 ~~~g~~l~~~~l~~l~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~R~~~~~~L~~~a~~~ 115 (397)
T 3oz2_A 43 VRCGEGLSKGILNEAD--IKADRSFIANEV--KGARIYGPSEKRPIILQSEK---AGNEVGYVLERDKFDKHLAALAAKA 115 (397)
T ss_dssp CCSCCEEETHHHHHTT--CCCCTTTEEEEE--SEEEEECTTCSSCEEEECSS---SSCCCEEEECHHHHHHHHHHHHHHH
T ss_pred CceecccCHHHHHHcC--CCchhhhhhccc--ceEEEEeCCCceEeeccccc---cCCceeEEEEHHHHHHHHHHHHHhc
Confidence 3457778777777763 111111222233 3455555443 34333321 2245589999999999999999999
Q ss_pred CCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccchHHHhhcCCCC
Q psy9486 81 GVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLTKSLSSRFNLRG 154 (165)
Q Consensus 81 Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~~l~~~~gl~~ 154 (165)
|++++++++|+++..+ ++++++|.... +|+ ..+++|++||+|+|.+|.++++ +|+..
T Consensus 116 G~~~~~~~~v~~~~~~-~~~~~~v~~~~-----~~~-------~~~~~a~~vIgAdG~~S~vr~~----~g~~~ 172 (397)
T 3oz2_A 116 GADVWVKSPALGVIKE-NGKVAGAKIRH-----NNE-------IVDVRAKMVIAADGFESEFGRW----AGLKS 172 (397)
T ss_dssp TCEEESSCCEEEEEEE-TTEEEEEEEEE-----TTE-------EEEEEEEEEEECCCTTCHHHHH----HTCGG
T ss_pred CcEEeeeeeeeeeeec-cceeeeeeecc-----ccc-------ceEEEEeEEEeCCccccHHHHH----cCCCc
Confidence 9999999999999886 78888887654 221 2479999999999999988777 56543
No 3
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.94 E-value=4.1e-09 Score=87.29 Aligned_cols=102 Identities=22% Similarity=0.271 Sum_probs=76.0
Q ss_pred eeceEEEEcCCc-e-EEecCCCCCCCCCCCcEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEcccc
Q psy9486 33 QEDKFAYLTKSK-R-IGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVG 110 (165)
Q Consensus 33 ~~~~~~~~~~~~-~-l~i~~~~~~~~~~~~~~~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g 110 (165)
....+.+..++. . +.++... .....+|+++|..|+++|.+.|++.||+|+.+++|+++..+ +++++||.+.+.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~- 143 (397)
T 3cgv_A 69 EVKGARIYGPSEKRPIILQSEK---AGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKE-NGKVAGAKIRHN- 143 (397)
T ss_dssp EESEEEEECTTCSSCEEEC--------CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEE-TTEEEEEEEEET-
T ss_pred hcceEEEEcCCCCEEEEEeccc---cCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEe-CCEEEEEEEEEC-
Confidence 344566666553 3 5555431 12345899999999999999999999999999999999986 788888888531
Q ss_pred ccCCCCCCCCCCcCeEEEcCEEEEcccCCcccchHHHhhcCCCC
Q psy9486 111 IAKDGSPKDTFARGMELHAKVTIFAEGCHGHLTKSLSSRFNLRG 154 (165)
Q Consensus 111 ~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~~l~~~~gl~~ 154 (165)
+ .+.+++|+.||+|+|.+|.+.+. +|+..
T Consensus 144 ----~-------~~~~~~a~~vV~A~G~~s~~~~~----~g~~~ 172 (397)
T 3cgv_A 144 ----N-------EIVDVRAKMVIAADGFESEFGRW----AGLKS 172 (397)
T ss_dssp ----T-------EEEEEEEEEEEECCCTTCHHHHH----HTCCT
T ss_pred ----C-------eEEEEEcCEEEECCCcchHhHHh----cCCCc
Confidence 1 13589999999999999977666 56654
No 4
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.93 E-value=6.3e-09 Score=87.22 Aligned_cols=104 Identities=18% Similarity=0.240 Sum_probs=75.3
Q ss_pred eceEEEEcCCceEEecCCCCCCCCCCCcEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccC
Q psy9486 34 EDKFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAK 113 (165)
Q Consensus 34 ~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~ 113 (165)
...+.|...+....+++..........+|.++|..|+++|.+.|++.||+|+++++|+++..++++.++.|.+.+
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~----- 147 (421)
T 3nix_A 73 KFGAKFVRGKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDIN----- 147 (421)
T ss_dssp ECEEEEEETTEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETT-----
T ss_pred cCCcEEEeCCeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCC-----
Confidence 345556555555566664332222345899999999999999999999999999999999986445445555543
Q ss_pred CCCCCCCCCcCeEEEcCEEEEcccCCcccchHHHhhcCCCC
Q psy9486 114 DGSPKDTFARGMELHAKVTIFAEGCHGHLTKSLSSRFNLRG 154 (165)
Q Consensus 114 ~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~~l~~~~gl~~ 154 (165)
|+. .+++|+.||+|+|.+|.+.+. +|+..
T Consensus 148 -g~~-------~~~~a~~vV~A~G~~s~l~~~----~g~~~ 176 (421)
T 3nix_A 148 -GNK-------REIEARFIIDASGYGRVIPRM----FGLDK 176 (421)
T ss_dssp -SCE-------EEEEEEEEEECCGGGCHHHHH----TTCEE
T ss_pred -CCE-------EEEEcCEEEECCCCchhhHHh----cCCCC
Confidence 321 269999999999999977655 66643
No 5
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.78 E-value=3.1e-08 Score=84.79 Aligned_cols=75 Identities=20% Similarity=0.271 Sum_probs=63.0
Q ss_pred CcEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCC
Q psy9486 60 GNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 139 (165)
Q Consensus 60 ~~~~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~ 139 (165)
.+|.++|..|+++|.++|++.|++|+++++|+++..+ +++|+||.+.+. .+|+. .+++|++||+|+|.+
T Consensus 93 ~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~---~~G~~-------~~~~ad~VV~AdG~~ 161 (453)
T 3atr_A 93 EGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFE-DGYVKGAVLFNR---RTNEE-------LTVYSKVVVEATGYS 161 (453)
T ss_dssp EEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEE-TTEEEEEEEEET---TTTEE-------EEEECSEEEECCGGG
T ss_pred CcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEE-CCEEEEEEEEEc---CCCce-------EEEEcCEEEECcCCc
Confidence 3799999999999999999999999999999999886 678888877531 02321 279999999999999
Q ss_pred cccchH
Q psy9486 140 GHLTKS 145 (165)
Q Consensus 140 s~l~~~ 145 (165)
|.+.+.
T Consensus 162 s~vr~~ 167 (453)
T 3atr_A 162 RSFRSK 167 (453)
T ss_dssp CTTGGG
T ss_pred hhhHHh
Confidence 998776
No 6
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.72 E-value=6.2e-08 Score=84.43 Aligned_cols=76 Identities=18% Similarity=0.281 Sum_probs=65.7
Q ss_pred CCcEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccC
Q psy9486 59 HGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGC 138 (165)
Q Consensus 59 ~~~~~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~ 138 (165)
..+|.++|..|+++|.+.|++.||+|+++++|+++..+ +++|.||.+.. .+|+. .+++|+.||+|+|.
T Consensus 103 ~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~-~~~v~gv~~~~----~dG~~-------~~i~ad~VI~AdG~ 170 (512)
T 3e1t_A 103 GFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFE-GERAVGVRYRN----TEGVE-------LMAHARFIVDASGN 170 (512)
T ss_dssp CCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEE-TTEEEEEEEEC----SSSCE-------EEEEEEEEEECCCT
T ss_pred ceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEE-CCEEEEEEEEe----CCCCE-------EEEEcCEEEECCCc
Confidence 45799999999999999999999999999999999986 68888888764 34432 37999999999999
Q ss_pred CcccchHH
Q psy9486 139 HGHLTKSL 146 (165)
Q Consensus 139 ~s~l~~~l 146 (165)
+|.+.+++
T Consensus 171 ~S~vr~~l 178 (512)
T 3e1t_A 171 RTRVSQAV 178 (512)
T ss_dssp TCSSGGGT
T ss_pred chHHHHHc
Confidence 99998873
No 7
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.59 E-value=1.7e-07 Score=81.12 Aligned_cols=71 Identities=23% Similarity=0.249 Sum_probs=62.0
Q ss_pred CCcEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccC
Q psy9486 59 HGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGC 138 (165)
Q Consensus 59 ~~~~~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~ 138 (165)
..+|.++|..|+++|.+.|++.||+++++ +|+++..++++.+++|.+.+ |.+++|+.||+|+|.
T Consensus 165 ~~~~~~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~---------------g~~~~ad~vV~A~G~ 228 (511)
T 2weu_A 165 PYAYHFDADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQ---------------HGEISGDLFVDCTGF 228 (511)
T ss_dssp SCEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESS---------------SCEEECSEEEECCGG
T ss_pred CeeEEEcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECC---------------CCEEEcCEEEECCCc
Confidence 34789999999999999999999999999 99999886567888888865 357999999999999
Q ss_pred CcccchH
Q psy9486 139 HGHLTKS 145 (165)
Q Consensus 139 ~s~l~~~ 145 (165)
+|.+.++
T Consensus 229 ~S~~~~~ 235 (511)
T 2weu_A 229 RGLLINQ 235 (511)
T ss_dssp GCCCCCC
T ss_pred chHHHHH
Confidence 9988544
No 8
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.56 E-value=3.5e-07 Score=76.37 Aligned_cols=74 Identities=14% Similarity=0.094 Sum_probs=61.8
Q ss_pred CcEEEEhHHHHHHHHHHHHHC-CCEEecCCceeEEEEcCCCcEE-EEEEccccccCCCCCCCCCCcCeEEEcCEEEEccc
Q psy9486 60 GNYVVRLGHVVKWLGEQAEAM-GVEIYPGIPASEVLYHGDGSVK-GIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEG 137 (165)
Q Consensus 60 ~~~~i~r~~~d~~L~~~A~~~-Gv~i~~~~~v~~i~~~~~g~V~-GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G 137 (165)
.++.++|..|+++|.+++++. |++|+++++|+++..+ ++.|+ .|.+.+ |.+++||+||+|+|
T Consensus 100 ~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~-~~~v~g~v~~~~---------------g~~~~ad~vV~AdG 163 (399)
T 2x3n_A 100 YFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRD-ERHAIDQVRLND---------------GRVLRPRVVVGADG 163 (399)
T ss_dssp CEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEEC-TTSCEEEEEETT---------------SCEEEEEEEEECCC
T ss_pred ccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEc-CCceEEEEEECC---------------CCEEECCEEEECCC
Confidence 368999999999999999998 9999999999999886 45554 566654 35799999999999
Q ss_pred CCcccchHHHhhcCCC
Q psy9486 138 CHGHLTKSLSSRFNLR 153 (165)
Q Consensus 138 ~~s~l~~~l~~~~gl~ 153 (165)
.+|.+.+. +|+.
T Consensus 164 ~~s~vr~~----lg~~ 175 (399)
T 2x3n_A 164 IASYVRRR----LLDI 175 (399)
T ss_dssp TTCHHHHH----TSCC
T ss_pred CChHHHHH----hCCC
Confidence 99987665 6654
No 9
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.51 E-value=4.9e-07 Score=78.99 Aligned_cols=70 Identities=17% Similarity=0.279 Sum_probs=60.3
Q ss_pred CcEEEEhHHHHHHHHHHHHH-CCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccC
Q psy9486 60 GNYVVRLGHVVKWLGEQAEA-MGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGC 138 (165)
Q Consensus 60 ~~~~i~r~~~d~~L~~~A~~-~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~ 138 (165)
.+|.++|..|+++|.+.|++ .||+++.+ +|+++..++++.+++|.+.+ |.+++|++||+|+|.
T Consensus 168 ~~~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~---------------g~~i~ad~vV~AdG~ 231 (526)
T 2pyx_A 168 YGYHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQ---------------NGEISGQLFIDCTGA 231 (526)
T ss_dssp CEEEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESS---------------SCEEECSEEEECSGG
T ss_pred eeEEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECC---------------CCEEEcCEEEECCCc
Confidence 46899999999999999999 99999999 69999886567777888764 347999999999999
Q ss_pred Cccc-chH
Q psy9486 139 HGHL-TKS 145 (165)
Q Consensus 139 ~s~l-~~~ 145 (165)
+|.+ .+.
T Consensus 232 ~S~~~~~~ 239 (526)
T 2pyx_A 232 KSLLLGEH 239 (526)
T ss_dssp GCCCCCCC
T ss_pred chHHHHHH
Confidence 9988 444
No 10
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.47 E-value=6.1e-07 Score=75.79 Aligned_cols=63 Identities=22% Similarity=0.345 Sum_probs=56.5
Q ss_pred EEEEhHHHHHHHHHHHHHCCCEEecCC---ceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccC
Q psy9486 62 YVVRLGHVVKWLGEQAEAMGVEIYPGI---PASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGC 138 (165)
Q Consensus 62 ~~i~r~~~d~~L~~~A~~~Gv~i~~~~---~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~ 138 (165)
..++...+.+.|.+.|++.||+|++++ +|++|..+ +++|+||++.+ |.+++|+.||+|+|+
T Consensus 156 g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~-~~~v~gV~t~~---------------G~~i~Ad~VV~AtG~ 219 (438)
T 3dje_A 156 GWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFE-NNDVKGAVTAD---------------GKIWRAERTFLCAGA 219 (438)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEE-TTEEEEEEETT---------------TEEEECSEEEECCGG
T ss_pred EEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEec-CCeEEEEEECC---------------CCEEECCEEEECCCC
Confidence 456677899999999999999999999 99999986 68899999976 458999999999999
Q ss_pred Cc
Q psy9486 139 HG 140 (165)
Q Consensus 139 ~s 140 (165)
++
T Consensus 220 ~s 221 (438)
T 3dje_A 220 SA 221 (438)
T ss_dssp GG
T ss_pred Ch
Confidence 97
No 11
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.47 E-value=4.6e-07 Score=79.70 Aligned_cols=69 Identities=19% Similarity=0.254 Sum_probs=60.8
Q ss_pred CcEEEEhHHHHHHHHHHHHHC-CCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccC
Q psy9486 60 GNYVVRLGHVVKWLGEQAEAM-GVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGC 138 (165)
Q Consensus 60 ~~~~i~r~~~d~~L~~~A~~~-Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~ 138 (165)
.+|.++|..|+++|.+.|++. ||+++++ +|+++..++++.+++|.+.+ |.++.|+.||+|+|.
T Consensus 187 ~~~~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~---------------G~~i~ad~vI~A~G~ 250 (550)
T 2e4g_A 187 YAWHFDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTAT---------------GRVFDADLFVDCSGF 250 (550)
T ss_dssp CEEEECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETT---------------SCEEECSEEEECCGG
T ss_pred cceEEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECC---------------CCEEECCEEEECCCC
Confidence 478999999999999999998 9999999 99999886567888888875 457999999999999
Q ss_pred Ccccch
Q psy9486 139 HGHLTK 144 (165)
Q Consensus 139 ~s~l~~ 144 (165)
+|.+.+
T Consensus 251 ~S~~~~ 256 (550)
T 2e4g_A 251 RGLLIN 256 (550)
T ss_dssp GCCCCC
T ss_pred chhhHH
Confidence 998833
No 12
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.45 E-value=6.4e-07 Score=73.44 Aligned_cols=72 Identities=14% Similarity=0.084 Sum_probs=60.2
Q ss_pred cEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 61 NYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 61 ~~~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
+..++...+.++|.+.|+++|++|+++++|++|..+ ++. ++|++.+ | +++|+.||+|+|+++
T Consensus 148 ~~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~-~~~-~~V~t~~---------------g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 148 GADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRV-DGA-WEVRCDA---------------G-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEE-TTE-EEEECSS---------------E-EEEESEEEECCGGGH
T ss_pred CceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEe-CCe-EEEEeCC---------------C-EEEcCEEEECCChhH
Confidence 456788999999999999999999999999999986 454 6787765 3 899999999999997
Q ss_pred ccchHHHhhcCCC
Q psy9486 141 HLTKSLSSRFNLR 153 (165)
Q Consensus 141 ~l~~~l~~~~gl~ 153 (165)
.++.+.+|+.
T Consensus 210 ---~~l~~~~g~~ 219 (381)
T 3nyc_A 210 ---DAIAGLAGVR 219 (381)
T ss_dssp ---HHHHHHHTCC
T ss_pred ---HHHHHHhCCC
Confidence 5566667764
No 13
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.44 E-value=9.3e-07 Score=71.89 Aligned_cols=76 Identities=21% Similarity=0.217 Sum_probs=60.8
Q ss_pred cEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 61 NYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 61 ~~~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
...++...+.+.|.+.|++.|++|+++++|++|..++ +.++.|.+.+ |+. .+++|+.||+|+|.++
T Consensus 144 ~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~-~~~~~v~~~~------g~~-------~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 144 TGIVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRP-EGGFELDFGG------AEP-------MTLSCRVLINAAGLHA 209 (369)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEECT-TSSEEEEECT------TSC-------EEEEEEEEEECCGGGH
T ss_pred CEEECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEcC-CceEEEEECC------Cce-------eEEEeCEEEECCCcch
Confidence 3467888999999999999999999999999999863 4334577654 211 4799999999999996
Q ss_pred ccchHHHhhc-CCC
Q psy9486 141 HLTKSLSSRF-NLR 153 (165)
Q Consensus 141 ~l~~~l~~~~-gl~ 153 (165)
.+|.+.+ |+.
T Consensus 210 ---~~l~~~~~g~~ 220 (369)
T 3dme_A 210 ---PGLARRIEGIP 220 (369)
T ss_dssp ---HHHHHTEETSC
T ss_pred ---HHHHHHhcCCC
Confidence 6777778 774
No 14
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.44 E-value=4.3e-07 Score=81.20 Aligned_cols=74 Identities=18% Similarity=0.252 Sum_probs=62.8
Q ss_pred CCcEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccC
Q psy9486 59 HGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGC 138 (165)
Q Consensus 59 ~~~~~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~ 138 (165)
..+|.++|..|+++|.+.|++.||+++++++|+++..+ ++.+++|.+.+ +|.. .+++|+.||+|+|.
T Consensus 120 ~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~-~g~~~~V~~~~-----~G~~-------~~i~AdlVV~AdG~ 186 (591)
T 3i3l_A 120 DHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLS-DPDRVVLTVRR-----GGES-------VTVESDFVIDAGGS 186 (591)
T ss_dssp SCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECC-STTCEEEEEEE-----TTEE-------EEEEESEEEECCGG
T ss_pred CeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEc-CCCEEEEEEec-----CCce-------EEEEcCEEEECCCC
Confidence 45799999999999999999999999999999999875 57778888863 1211 47999999999999
Q ss_pred CcccchH
Q psy9486 139 HGHLTKS 145 (165)
Q Consensus 139 ~s~l~~~ 145 (165)
+|.+.++
T Consensus 187 ~S~lr~~ 193 (591)
T 3i3l_A 187 GGPISRK 193 (591)
T ss_dssp GCHHHHH
T ss_pred cchhHHH
Confidence 9987666
No 15
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.42 E-value=7e-07 Score=78.12 Aligned_cols=71 Identities=21% Similarity=0.252 Sum_probs=61.4
Q ss_pred CCcEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccC
Q psy9486 59 HGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGC 138 (165)
Q Consensus 59 ~~~~~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~ 138 (165)
..+|.++|..|+++|.+.|++.||+++.+ +|+++..++++.+++|.+.+ |.+++|+.||+|+|.
T Consensus 157 ~~~~~i~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~---------------g~~i~ad~vV~A~G~ 220 (538)
T 2aqj_A 157 SHAWHFDAHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKE---------------GRTLEADLFIDCSGM 220 (538)
T ss_dssp CCEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETT---------------SCEECCSEEEECCGG
T ss_pred CccEEEeHHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECC---------------CcEEEeCEEEECCCC
Confidence 34789999999999999999999999999 89999886567778888865 347999999999999
Q ss_pred CcccchH
Q psy9486 139 HGHLTKS 145 (165)
Q Consensus 139 ~s~l~~~ 145 (165)
+|.+.++
T Consensus 221 ~s~~~~~ 227 (538)
T 2aqj_A 221 RGLLINQ 227 (538)
T ss_dssp GCCCCCC
T ss_pred chhhHHH
Confidence 9988443
No 16
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.42 E-value=1.2e-06 Score=72.40 Aligned_cols=72 Identities=11% Similarity=0.175 Sum_probs=60.1
Q ss_pred EEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 62 YVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 62 ~~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
..++...+.+.|.+.|++.|++|+++++|+++..+ +++++||++.+ | +++|+.||+|+|.++
T Consensus 144 ~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~-~~~v~gv~~~~---------------g-~i~a~~VV~A~G~~s- 205 (382)
T 1y56_B 144 GKADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIE-NNEIKGVKTNK---------------G-IIKTGIVVNATNAWA- 205 (382)
T ss_dssp CEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEETT---------------E-EEECSEEEECCGGGH-
T ss_pred eeECHHHHHHHHHHHHHHCCCEEECCceEEEEEEE-CCEEEEEEECC---------------c-EEECCEEEECcchhH-
Confidence 35678899999999999999999999999999986 67888898865 3 799999999999997
Q ss_pred cchHHHhhcCCC
Q psy9486 142 LTKSLSSRFNLR 153 (165)
Q Consensus 142 l~~~l~~~~gl~ 153 (165)
..+.+.+|+.
T Consensus 206 --~~l~~~~g~~ 215 (382)
T 1y56_B 206 --NLINAMAGIK 215 (382)
T ss_dssp --HHHHHHHTCC
T ss_pred --HHHHHHcCCC
Confidence 3444446654
No 17
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.40 E-value=7.1e-07 Score=77.74 Aligned_cols=71 Identities=21% Similarity=0.280 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEc-CEEEEcccCCcccchHH
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHA-KVTIFAEGCHGHLTKSL 146 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~A-k~VI~A~G~~s~l~~~l 146 (165)
.+.+.|.++|++.||+|+++++|++|+.+++|+|+||++.+ +|.. .+|+| |.||+|+|.++.. ++|
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~-----~g~~-------~~i~A~k~VVlAtGG~~~n-~~m 269 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQ-----YGKE-------VAVRARRGVVLATGSFAYN-DKM 269 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEE-----TTEE-------EEEEEEEEEEECCCCCTTC-HHH
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEE-----CCcE-------EEEEeCCeEEEeCCChhhC-HHH
Confidence 78999999999999999999999999996569999998875 2211 36999 5999999999976 566
Q ss_pred HhhcC
Q psy9486 147 SSRFN 151 (165)
Q Consensus 147 ~~~~g 151 (165)
.++|-
T Consensus 270 ~~~~~ 274 (510)
T 4at0_A 270 IEAHA 274 (510)
T ss_dssp HHHHC
T ss_pred HHHhC
Confidence 66663
No 18
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.34 E-value=1.5e-06 Score=75.79 Aligned_cols=76 Identities=20% Similarity=0.240 Sum_probs=61.2
Q ss_pred CcEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCC
Q psy9486 60 GNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 139 (165)
Q Consensus 60 ~~~~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~ 139 (165)
.++.+++..+.+.|.+.|++.|++|+.+++|+++..++ +.|+ |.+.+ .+|+ .+++|++||+|+|++
T Consensus 100 ~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~-~~v~-v~~~~----~~g~--------~~~~a~~vVgADG~~ 165 (499)
T 2qa2_A 100 GVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEG-DHVV-VEVEG----PDGP--------RSLTTRYVVGCDGGR 165 (499)
T ss_dssp EEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECS-SCEE-EEEEC----SSCE--------EEEEEEEEEECCCTT
T ss_pred ceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC-CEEE-EEEEc----CCCc--------EEEEeCEEEEccCcc
Confidence 46899999999999999999999999999999998864 4444 55543 1221 379999999999999
Q ss_pred cccchHHHhhcCCC
Q psy9486 140 GHLTKSLSSRFNLR 153 (165)
Q Consensus 140 s~l~~~l~~~~gl~ 153 (165)
|.+.+. +|+.
T Consensus 166 S~VR~~----lg~~ 175 (499)
T 2qa2_A 166 STVRKA----AGFD 175 (499)
T ss_dssp CHHHHH----TTCC
T ss_pred cHHHHH----cCCC
Confidence 988666 5654
No 19
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.34 E-value=1.3e-06 Score=76.25 Aligned_cols=76 Identities=16% Similarity=0.195 Sum_probs=61.0
Q ss_pred CcEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCC
Q psy9486 60 GNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 139 (165)
Q Consensus 60 ~~~~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~ 139 (165)
.++.+++..+.+.|.+.|++.|++|+.+++|+++..+ ++.|+ |.+.+ .+|+ .+++|++||+|+|++
T Consensus 99 ~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~-~~~v~-v~~~~----~~g~--------~~~~a~~vVgADG~~ 164 (500)
T 2qa1_A 99 AAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDD-GAGVT-VEVRG----PEGK--------HTLRAAYLVGCDGGR 164 (500)
T ss_dssp CEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEE-TTEEE-EEEEE----TTEE--------EEEEESEEEECCCTT
T ss_pred ceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEc-CCeEE-EEEEc----CCCC--------EEEEeCEEEECCCcc
Confidence 3689999999999999999999999999999999886 44443 55543 1120 279999999999999
Q ss_pred cccchHHHhhcCCC
Q psy9486 140 GHLTKSLSSRFNLR 153 (165)
Q Consensus 140 s~l~~~l~~~~gl~ 153 (165)
|.+.+. +|+.
T Consensus 165 S~VR~~----lg~~ 174 (500)
T 2qa1_A 165 SSVRKA----AGFD 174 (500)
T ss_dssp CHHHHH----TTCC
T ss_pred hHHHHH----cCCC
Confidence 988666 6654
No 20
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.32 E-value=9.2e-07 Score=78.05 Aligned_cols=76 Identities=18% Similarity=0.217 Sum_probs=62.0
Q ss_pred EEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccc
Q psy9486 64 VRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLT 143 (165)
Q Consensus 64 i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~ 143 (165)
+....+.+.|.+++++.||+|+++++|++|+.+++++|+||++.+ .+|+. ..|+||.||+|+|.++.+
T Consensus 247 ~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~----~~g~~-------~~i~A~~VVlAtGg~s~~- 314 (566)
T 1qo8_A 247 SSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHG----KHTGY-------YMIGAKSVVLATGGYGMN- 314 (566)
T ss_dssp CHHHHHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEE----TTTEE-------EEEEEEEEEECCCCCTTC-
T ss_pred CCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEe----CCCcE-------EEEEcCEEEEecCCcccC-
Confidence 346788999999999999999999999999986338999998864 23321 269999999999999988
Q ss_pred hHHHhhcC
Q psy9486 144 KSLSSRFN 151 (165)
Q Consensus 144 ~~l~~~~g 151 (165)
++|.++|.
T Consensus 315 ~~~~~~~~ 322 (566)
T 1qo8_A 315 KEMIAYYR 322 (566)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhC
Confidence 66777764
No 21
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.31 E-value=1.8e-06 Score=76.23 Aligned_cols=75 Identities=23% Similarity=0.236 Sum_probs=60.2
Q ss_pred EhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccch
Q psy9486 65 RLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLTK 144 (165)
Q Consensus 65 ~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~ 144 (165)
....+.+.|.+++++.||+|+++++|++|+.+++++|+||.+.+ .+|+. ..|+|+.||+|+|.++.. +
T Consensus 253 ~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~----~~g~~-------~~i~a~~VVlAtGg~~~n-~ 320 (571)
T 1y0p_A 253 VGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKG----MYKGY-------YWVKADAVILATGGFAKN-N 320 (571)
T ss_dssp HHHHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEE----TTTEE-------EEEECSEEEECCCCCTTC-H
T ss_pred CHHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEe----CCCcE-------EEEECCeEEEeCCCcccC-H
Confidence 34688999999999999999999999999986348999998864 23321 269999999999999986 4
Q ss_pred HHHhhcC
Q psy9486 145 SLSSRFN 151 (165)
Q Consensus 145 ~l~~~~g 151 (165)
++.++|.
T Consensus 321 ~~~~~~~ 327 (571)
T 1y0p_A 321 ERVAKLD 327 (571)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 5666553
No 22
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.30 E-value=2.2e-06 Score=71.72 Aligned_cols=69 Identities=14% Similarity=0.078 Sum_probs=58.4
Q ss_pred CCcEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccC
Q psy9486 59 HGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGC 138 (165)
Q Consensus 59 ~~~~~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~ 138 (165)
..+|.++|..|+++|.+.|++ ++|+++++|+++..+ ++.| .|.+.+ |.++.|++||+|+|.
T Consensus 119 ~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~-~~~v-~v~~~~---------------g~~~~a~~vV~AdG~ 179 (407)
T 3rp8_A 119 SRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEED-ADGV-TVWFTD---------------GSSASGDLLIAADGS 179 (407)
T ss_dssp SCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEE-TTEE-EEEETT---------------SCEEEESEEEECCCT
T ss_pred CceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEec-CCcE-EEEEcC---------------CCEEeeCEEEECCCc
Confidence 447999999999999999988 899999999999886 4443 356654 458999999999999
Q ss_pred CcccchHH
Q psy9486 139 HGHLTKSL 146 (165)
Q Consensus 139 ~s~l~~~l 146 (165)
+|.+.+.+
T Consensus 180 ~S~vr~~l 187 (407)
T 3rp8_A 180 HSALRPWV 187 (407)
T ss_dssp TCSSHHHH
T ss_pred ChHHHHHh
Confidence 99998775
No 23
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.29 E-value=3.5e-06 Score=72.14 Aligned_cols=72 Identities=19% Similarity=0.269 Sum_probs=58.3
Q ss_pred hHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccc--
Q psy9486 66 LGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLT-- 143 (165)
Q Consensus 66 r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~-- 143 (165)
...+.+.|.+++++.||+|+++++|+++..+ +++|++|.+.+ |..++|+.||+|+|.+|.-.
T Consensus 133 ~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~-~~~v~~V~~~~---------------G~~i~Ad~VVlAtGg~s~~~~g 196 (447)
T 2i0z_A 133 AQSVVDALLTRLKDLGVKIRTNTPVETIEYE-NGQTKAVILQT---------------GEVLETNHVVIAVGGKSVPQTG 196 (447)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETT---------------CCEEECSCEEECCCCSSSGGGS
T ss_pred HHHHHHHHHHHHHHCCCEEEeCcEEEEEEec-CCcEEEEEECC---------------CCEEECCEEEECCCCCcCCCCC
Confidence 5688899999999999999999999999986 68888998865 34699999999999998211
Q ss_pred -----hHHHhhcCCC
Q psy9486 144 -----KSLSSRFNLR 153 (165)
Q Consensus 144 -----~~l~~~~gl~ 153 (165)
..+.+++|+.
T Consensus 197 ~tG~g~~la~~~G~~ 211 (447)
T 2i0z_A 197 STGDGYAWAEKAGHT 211 (447)
T ss_dssp CSSHHHHHHHHTTCC
T ss_pred CCcHHHHHHHHCCCC
Confidence 1444457765
No 24
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.29 E-value=1.6e-06 Score=73.48 Aligned_cols=77 Identities=17% Similarity=0.188 Sum_probs=62.0
Q ss_pred cEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEc--------------CCCcEEEEEEccccccCCCCCCCCCCcCeE
Q psy9486 61 NYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYH--------------GDGSVKGIATGDVGIAKDGSPKDTFARGME 126 (165)
Q Consensus 61 ~~~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~--------------~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~ 126 (165)
...++...+.+.|.+.|++.||+|+++++|++|..+ ++++|++|++.+ | +
T Consensus 175 ~~~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~---------------g-~ 238 (448)
T 3axb_A 175 AGFLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSD---------------G-T 238 (448)
T ss_dssp EEECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETT---------------S-C
T ss_pred CeEEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCC---------------C-E
Confidence 445677899999999999999999999999999872 256788888865 3 6
Q ss_pred E--EcCEEEEcccCCcccchHHHhhcCCCCCC
Q psy9486 127 L--HAKVTIFAEGCHGHLTKSLSSRFNLRGQC 156 (165)
Q Consensus 127 i--~Ak~VI~A~G~~s~l~~~l~~~~gl~~~~ 156 (165)
+ .|+.||+|+|+++ .++.+.+|+..+.
T Consensus 239 i~~~Ad~VV~AtG~~s---~~l~~~~g~~~~~ 267 (448)
T 3axb_A 239 RVEVGEKLVVAAGVWS---NRLLNPLGIDTFS 267 (448)
T ss_dssp EEEEEEEEEECCGGGH---HHHHGGGTCCCSE
T ss_pred EeecCCEEEECCCcCH---HHHHHHcCCCCcc
Confidence 8 9999999999997 5566667764333
No 25
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.28 E-value=3.3e-06 Score=71.20 Aligned_cols=89 Identities=13% Similarity=0.193 Sum_probs=66.4
Q ss_pred cEEEE--hHHHHHHHHHHHHH-CCCEEecCCceeEEEEcCC----------------C--cEEEEEEccccccCCCCCCC
Q psy9486 61 NYVVR--LGHVVKWLGEQAEA-MGVEIYPGIPASEVLYHGD----------------G--SVKGIATGDVGIAKDGSPKD 119 (165)
Q Consensus 61 ~~~i~--r~~~d~~L~~~A~~-~Gv~i~~~~~v~~i~~~~~----------------g--~V~GV~~~~~g~~~~g~~~~ 119 (165)
+|... ...+.+.|.+++++ .|+++++++.|.+++.+++ + +|.||.+.+.-+..+|..+.
T Consensus 152 ~~~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~ 231 (344)
T 3jsk_A 152 DYVVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQS 231 (344)
T ss_dssp SEEEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSS
T ss_pred CeEEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCccc
Confidence 45444 46788999999998 6999999999999998642 3 89999886533334443211
Q ss_pred CCCcCeEEEcCEEEEcccCCcccchHHHhhc
Q psy9486 120 TFARGMELHAKVTIFAEGCHGHLTKSLSSRF 150 (165)
Q Consensus 120 ~~~~g~~i~Ak~VI~A~G~~s~l~~~l~~~~ 150 (165)
... ..+|+|++||+|+|..|.+.+.+.+++
T Consensus 232 ~~d-~~~i~Ak~VV~ATG~~s~v~~~~~~~l 261 (344)
T 3jsk_A 232 AMD-PNTINAPVIISTTGHDGPFGAFSVKRL 261 (344)
T ss_dssp CCB-CEEEECSEEEECCCSSSSSSCHHHHHH
T ss_pred ccC-ceEEEcCEEEECCCCCchhhHHHHHHH
Confidence 111 358999999999999999887777774
No 26
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.26 E-value=2e-06 Score=71.35 Aligned_cols=72 Identities=22% Similarity=0.327 Sum_probs=59.0
Q ss_pred EEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 62 YVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 62 ~~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
..++-..+.+.|.+.+++.|++|+++++|+++..+ ++++++|++.+ | +++|+.||+|+|.++
T Consensus 169 ~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~-~~~~~~v~~~~---------------g-~~~a~~vV~a~G~~s- 230 (405)
T 2gag_B 169 GIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKD-GEKVTGVKTTR---------------G-TIHAGKVALAGAGHS- 230 (405)
T ss_dssp BBCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEETT---------------C-CEEEEEEEECCGGGH-
T ss_pred ccCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEe-CCEEEEEEeCC---------------c-eEECCEEEECCchhH-
Confidence 34566789999999999999999999999999886 67888898865 3 699999999999997
Q ss_pred cchHHHhhcCCC
Q psy9486 142 LTKSLSSRFNLR 153 (165)
Q Consensus 142 l~~~l~~~~gl~ 153 (165)
..+.+.+|+.
T Consensus 231 --~~l~~~~g~~ 240 (405)
T 2gag_B 231 --SVLAEMAGFE 240 (405)
T ss_dssp --HHHHHHHTCC
T ss_pred --HHHHHHcCCC
Confidence 3444446654
No 27
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.26 E-value=2.2e-06 Score=74.67 Aligned_cols=79 Identities=20% Similarity=0.166 Sum_probs=61.1
Q ss_pred CCcEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcE--EEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcc
Q psy9486 59 HGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSV--KGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAE 136 (165)
Q Consensus 59 ~~~~~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V--~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~ 136 (165)
...+.+++..|.+.|.++|++.|++|+++++|+++..++++++ +.|.+.+ .+| ..+++|++||+|+
T Consensus 112 ~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~----~~~--------~~~i~a~~vV~Ad 179 (535)
T 3ihg_A 112 AGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAG----PDG--------EYDLRAGYLVGAD 179 (535)
T ss_dssp CCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEE----TTE--------EEEEEEEEEEECC
T ss_pred CcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEc----CCC--------eEEEEeCEEEECC
Confidence 4478899999999999999999999999999999988644322 2244433 111 1479999999999
Q ss_pred cCCcccchHHHhhcCCC
Q psy9486 137 GCHGHLTKSLSSRFNLR 153 (165)
Q Consensus 137 G~~s~l~~~l~~~~gl~ 153 (165)
|.+|.+.+. +|+.
T Consensus 180 G~~S~vR~~----lgi~ 192 (535)
T 3ihg_A 180 GNRSLVRES----LGIG 192 (535)
T ss_dssp CTTCHHHHH----TTCC
T ss_pred CCcchHHHH----cCCC
Confidence 999988766 5554
No 28
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.26 E-value=2.6e-06 Score=75.48 Aligned_cols=75 Identities=19% Similarity=0.234 Sum_probs=60.3
Q ss_pred EhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccch
Q psy9486 65 RLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLTK 144 (165)
Q Consensus 65 ~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~ 144 (165)
....+.+.|.+++++.||+|+++++|++|+.+++++|+||++.+ .+|+. ..|.||.||+|+|.++.. +
T Consensus 253 ~g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~----~~G~~-------~~i~A~~VVlAtGg~~~~-~ 320 (572)
T 1d4d_A 253 VGAHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKG----EYTGY-------YVIKADAVVIAAGGFAKN-N 320 (572)
T ss_dssp HHHHHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEE----TTTEE-------EEEECSEEEECCCCCTTC-H
T ss_pred CHHHHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEe----CCCcE-------EEEEcCEEEEeCCCCccC-H
Confidence 35678899999999999999999999999986338999998864 23321 269999999999999987 5
Q ss_pred HHHhhcC
Q psy9486 145 SLSSRFN 151 (165)
Q Consensus 145 ~l~~~~g 151 (165)
++.++|.
T Consensus 321 ~~~~~~~ 327 (572)
T 1d4d_A 321 ERVSKYD 327 (572)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 6777774
No 29
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.25 E-value=3.2e-06 Score=70.20 Aligned_cols=65 Identities=23% Similarity=0.233 Sum_probs=56.4
Q ss_pred cEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 61 NYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 61 ~~~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
.+.++|..|.+.|.+.+++.||+|+++++|+++.. ++ .|.+.+ |.+++||.||+|+|.+|
T Consensus 101 ~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~---~v~~~~---------------g~~~~ad~vV~AdG~~s 160 (379)
T 3alj_A 101 WRIMTRSHLHDALVNRARALGVDISVNSEAVAADP--VG---RLTLQT---------------GEVLEADLIVGADGVGS 160 (379)
T ss_dssp EEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--TT---EEEETT---------------SCEEECSEEEECCCTTC
T ss_pred eEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC---EEEECC---------------CCEEEcCEEEECCCccH
Confidence 69999999999999999999999999999999965 34 455654 35799999999999999
Q ss_pred ccchH
Q psy9486 141 HLTKS 145 (165)
Q Consensus 141 ~l~~~ 145 (165)
.+.+.
T Consensus 161 ~vr~~ 165 (379)
T 3alj_A 161 KVRDS 165 (379)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88666
No 30
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.24 E-value=4.3e-06 Score=76.94 Aligned_cols=74 Identities=19% Similarity=0.319 Sum_probs=62.6
Q ss_pred cEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 61 NYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 61 ~~~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
...++...+.+.|.+.|++.||+|+++++|++|..+ ++++++|.+.+ | +++|+.||+|+|.++
T Consensus 145 ~g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~-~~~v~~V~t~~---------------G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 145 DGLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQS-GGRVTGVQTAD---------------G-VIPADIVVSCAGFWG 207 (830)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETT---------------E-EEECSEEEECCGGGH
T ss_pred CceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEe-CCEEEEEEECC---------------c-EEECCEEEECCccch
Confidence 456688899999999999999999999999999886 67888898875 3 799999999999997
Q ss_pred ccchHHHhhcCCCC
Q psy9486 141 HLTKSLSSRFNLRG 154 (165)
Q Consensus 141 ~l~~~l~~~~gl~~ 154 (165)
..+.+.+|+..
T Consensus 208 ---~~l~~~~g~~~ 218 (830)
T 1pj5_A 208 ---AKIGAMIGMAV 218 (830)
T ss_dssp ---HHHHHTTTCCC
T ss_pred ---HHHHHHhCCCc
Confidence 55666666643
No 31
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.24 E-value=9.4e-07 Score=78.51 Aligned_cols=76 Identities=17% Similarity=0.201 Sum_probs=60.8
Q ss_pred CCcEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcC-eEEEcCEEEEccc
Q psy9486 59 HGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARG-MELHAKVTIFAEG 137 (165)
Q Consensus 59 ~~~~~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g-~~i~Ak~VI~A~G 137 (165)
..++.+.+..+.+.|.+.|++.||+|+.+++|+++..++ +.|+ |.+.. .+ | .+++|++||+|+|
T Consensus 140 ~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~-~~v~-v~~~~----~~---------G~~~~~a~~vV~ADG 204 (570)
T 3fmw_A 140 PYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDA-EAVE-VTVAG----PS---------GPYPVRARYGVGCDG 204 (570)
T ss_dssp CSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCS-SCEE-EEEEE----TT---------EEEEEEESEEEECSC
T ss_pred CeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-CeEE-EEEEe----CC---------CcEEEEeCEEEEcCC
Confidence 347899999999999999999999999999999998763 4433 55521 11 3 4799999999999
Q ss_pred CCcccchHHHhhcCCC
Q psy9486 138 CHGHLTKSLSSRFNLR 153 (165)
Q Consensus 138 ~~s~l~~~l~~~~gl~ 153 (165)
.+|.+.+. +|+.
T Consensus 205 ~~S~vR~~----lGi~ 216 (570)
T 3fmw_A 205 GRSTVRRL----AADR 216 (570)
T ss_dssp SSCHHHHH----TTCC
T ss_pred CCchHHHH----cCCC
Confidence 99988666 6664
No 32
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.23 E-value=5.1e-06 Score=69.10 Aligned_cols=71 Identities=17% Similarity=0.152 Sum_probs=56.1
Q ss_pred cEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 61 NYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 61 ~~~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
+..++...+.+.|.+.|++.|++|+++++|++|..+ ++.|. |.+.+ .+++|+.||+|+|+++
T Consensus 147 ~g~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~-~~~v~-v~t~~----------------g~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 147 GGTIDVRGTLAALFTLAQAAGATLRAGETVTELVPD-ADGVS-VTTDR----------------GTYRAGKVVLACGPYT 208 (397)
T ss_dssp CEEEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEEE-TTEEE-EEESS----------------CEEEEEEEEECCGGGH
T ss_pred CCEEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEEc-CCeEE-EEECC----------------CEEEcCEEEEcCCcCh
Confidence 446788889999999999999999999999999886 45443 66543 3799999999999985
Q ss_pred ccchHHHhhcCC
Q psy9486 141 HLTKSLSSRFNL 152 (165)
Q Consensus 141 ~l~~~l~~~~gl 152 (165)
..+.+.+|+
T Consensus 209 ---~~l~~~~g~ 217 (397)
T 2oln_A 209 ---NDLLEPLGA 217 (397)
T ss_dssp ---HHHHGGGTC
T ss_pred ---HHHhhhcCC
Confidence 345455664
No 33
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.22 E-value=2.9e-06 Score=70.52 Aligned_cols=97 Identities=16% Similarity=0.092 Sum_probs=66.7
Q ss_pred ceEEEEcCCceEEecCCCCCCCCCCCcEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCC
Q psy9486 35 DKFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKD 114 (165)
Q Consensus 35 ~~~~~~~~~~~l~i~~~~~~~~~~~~~~~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~ 114 (165)
..+.+........+++... .....++.+.+..+.+.|.+.+.+.|++|+++++|+++..++++. +.|.+.+ +
T Consensus 73 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~-~~v~~~~-----~ 144 (394)
T 1k0i_A 73 EGVEIAFAGQRRRIDLKRL--SGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGER-PYVTFER-----D 144 (394)
T ss_dssp SCEEEEETTEEEEECHHHH--HTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSS-CEEEEEE-----T
T ss_pred ceEEEEECCceEEeccccc--cCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCc-eEEEEec-----C
Confidence 3455544444444444210 012347889999999999999999999999999999998752233 3465522 1
Q ss_pred CCCCCCCCcCeEEEcCEEEEcccCCcccchHH
Q psy9486 115 GSPKDTFARGMELHAKVTIFAEGCHGHLTKSL 146 (165)
Q Consensus 115 g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~~l 146 (165)
|+. .+++||+||+|+|.+|.+.+.+
T Consensus 145 g~~-------~~~~a~~vV~AdG~~S~vr~~l 169 (394)
T 1k0i_A 145 GER-------LRLDCDYIAGCDGFHGISRQSI 169 (394)
T ss_dssp TEE-------EEEECSEEEECCCTTCSTGGGS
T ss_pred CcE-------EEEEeCEEEECCCCCcHHHHhc
Confidence 211 1699999999999999987763
No 34
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.22 E-value=2.5e-06 Score=70.23 Aligned_cols=71 Identities=23% Similarity=0.252 Sum_probs=58.0
Q ss_pred EEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 62 YVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 62 ~~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
..++...+.+.|.+.+++.|++|+++++|+++..+ ++.+ +|.+.+ | .++|+.||+|+|.++
T Consensus 159 ~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~-~~~~-~v~~~~---------------g-~~~a~~vV~A~G~~s- 219 (382)
T 1ryi_A 159 VHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERD-GEAL-FIKTPS---------------G-DVWANHVVVASGVWS- 219 (382)
T ss_dssp CBCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECS-SSSE-EEEETT---------------E-EEEEEEEEECCGGGT-
T ss_pred eEEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEE-CCEE-EEEcCC---------------c-eEEcCEEEECCChhH-
Confidence 45677899999999999999999999999999875 5666 787764 3 799999999999997
Q ss_pred cchHHHhhcCCC
Q psy9486 142 LTKSLSSRFNLR 153 (165)
Q Consensus 142 l~~~l~~~~gl~ 153 (165)
..+.+.+++.
T Consensus 220 --~~l~~~~~~~ 229 (382)
T 1ryi_A 220 --GMFFKQLGLN 229 (382)
T ss_dssp --HHHHHHTTCC
T ss_pred --HHHHHhcCCC
Confidence 3455556653
No 35
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.11 E-value=1.1e-05 Score=71.67 Aligned_cols=73 Identities=16% Similarity=0.272 Sum_probs=60.8
Q ss_pred EhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccch
Q psy9486 65 RLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLTK 144 (165)
Q Consensus 65 ~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~ 144 (165)
....+.+.|.+.+++.|++|+++++|+++..+ ++++++|.+.+ |.++.|+.||+|+|.++.-.-
T Consensus 218 ~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~-~~~v~gV~l~~---------------G~~i~Ad~VVlA~G~~s~~~~ 281 (549)
T 3nlc_A 218 KLVTMIEKMRATIIELGGEIRFSTRVDDLHME-DGQITGVTLSN---------------GEEIKSRHVVLAVGHSARDTF 281 (549)
T ss_dssp HHHHHHHHHHHHHHHTTCEEESSCCEEEEEES-SSBEEEEEETT---------------SCEEECSCEEECCCTTCHHHH
T ss_pred hHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEe-CCEEEEEEECC---------------CCEEECCEEEECCCCChhhHH
Confidence 45678888999999999999999999999986 67899999875 457999999999999985433
Q ss_pred HHHhhcCCC
Q psy9486 145 SLSSRFNLR 153 (165)
Q Consensus 145 ~l~~~~gl~ 153 (165)
++.+..|+.
T Consensus 282 ~~l~~~Gi~ 290 (549)
T 3nlc_A 282 EMLHERGVY 290 (549)
T ss_dssp HHHHHTTCC
T ss_pred HHHHHcCCC
Confidence 456667765
No 36
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.11 E-value=8.1e-06 Score=69.88 Aligned_cols=60 Identities=12% Similarity=0.132 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 67 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 67 ~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
..+.+.|++.++++|++|+++++|++|..+ +++++||++.+ |.++.||.||.+.+.+..+
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~-~~~~~gV~~~~---------------g~~~~ad~VV~~a~~~~~~ 280 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMETT-GNKIEAVHLED---------------GRRFLTQAVASNADVVHTY 280 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETT---------------SCEEECSCEEECCC-----
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEee-CCeEEEEEecC---------------CcEEEcCEEEECCCHHHHH
Confidence 468888999999999999999999999996 79999999986 5789999999998877654
No 37
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.10 E-value=2.8e-06 Score=71.60 Aligned_cols=73 Identities=19% Similarity=0.230 Sum_probs=53.5
Q ss_pred cEEEEhHHHHHHHHHHHHHCCCEEecCCcee---------EEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCE
Q psy9486 61 NYVVRLGHVVKWLGEQAEAMGVEIYPGIPAS---------EVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKV 131 (165)
Q Consensus 61 ~~~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~---------~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~ 131 (165)
...++...+.++|.+.|++.|++|+++++|+ ++..+ ++++ +|++.+ | .++|+.
T Consensus 166 ~g~v~~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~-~~~v-~v~~~~---------------g-~i~a~~ 227 (405)
T 3c4n_A 166 ALTYRPGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVT-NTHQ-IVVHET---------------R-QIRAGV 227 (405)
T ss_dssp CEEECHHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC---------CBCC---------------E-EEEEEE
T ss_pred CEEEcHHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEee-CCeE-EEEECC---------------c-EEECCE
Confidence 4567888999999999999999999999999 88764 4555 676653 3 799999
Q ss_pred EEEcccCCcccchHHHh-hcCCCC
Q psy9486 132 TIFAEGCHGHLTKSLSS-RFNLRG 154 (165)
Q Consensus 132 VI~A~G~~s~l~~~l~~-~~gl~~ 154 (165)
||+|+|.++ ..+.+ .+|+..
T Consensus 228 VV~A~G~~s---~~l~~~~~g~~~ 248 (405)
T 3c4n_A 228 IIVAAGAAG---PALVEQGLGLHT 248 (405)
T ss_dssp EEECCGGGH---HHHHHHHHCCCC
T ss_pred EEECCCccH---HHHHHHhcCCCC
Confidence 999999997 34444 466543
No 38
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.10 E-value=8e-06 Score=72.25 Aligned_cols=77 Identities=17% Similarity=0.157 Sum_probs=62.8
Q ss_pred EEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 63 VVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 63 ~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
.++-..+...|++.|++.|++|+++++|+++..+ +++|+||++.+. .+|+ +.+++|+.||.|+|.|+
T Consensus 166 ~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~-~g~v~gV~~~d~---~tg~-------~~~i~A~~VV~AaG~~s-- 232 (561)
T 3da1_A 166 RTDDARLTLEIMKEAVARGAVALNYMKVESFIYD-QGKVVGVVAKDR---LTDT-------THTIYAKKVVNAAGPWV-- 232 (561)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEE-TTEEEEEEEEET---TTCC-------EEEEEEEEEEECCGGGH--
T ss_pred eEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEc-CCeEEEEEEEEc---CCCc-------eEEEECCEEEECCCcch--
Confidence 5677899999999999999999999999999986 788999988751 1232 24799999999999997
Q ss_pred chHHHhhcCCC
Q psy9486 143 TKSLSSRFNLR 153 (165)
Q Consensus 143 ~~~l~~~~gl~ 153 (165)
.++.+..|..
T Consensus 233 -~~l~~~~g~~ 242 (561)
T 3da1_A 233 -DTLREKDRSK 242 (561)
T ss_dssp -HHHHHTTTCC
T ss_pred -HHHHHhcCCC
Confidence 5566556654
No 39
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.09 E-value=1.3e-05 Score=65.97 Aligned_cols=69 Identities=22% Similarity=0.193 Sum_probs=55.9
Q ss_pred EEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 62 YVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 62 ~~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
..++...+.+.|.+.|++.|++|+++++|+++..+ ++. +.|++.+ .+++|+.||+|+|.++
T Consensus 145 ~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~-~~~-~~v~~~~----------------g~~~a~~vV~A~G~~~- 205 (389)
T 2gf3_A 145 GVLFSENCIRAYRELAEARGAKVLTHTRVEDFDIS-PDS-VKIETAN----------------GSYTADKLIVSMGAWN- 205 (389)
T ss_dssp EEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEEC-SSC-EEEEETT----------------EEEEEEEEEECCGGGH-
T ss_pred cEEeHHHHHHHHHHHHHHCCCEEEcCcEEEEEEec-CCe-EEEEeCC----------------CEEEeCEEEEecCccH-
Confidence 45677899999999999999999999999999886 344 3466653 3799999999999986
Q ss_pred cchHHHhhcC
Q psy9486 142 LTKSLSSRFN 151 (165)
Q Consensus 142 l~~~l~~~~g 151 (165)
..+.+.++
T Consensus 206 --~~l~~~~g 213 (389)
T 2gf3_A 206 --SKLLSKLN 213 (389)
T ss_dssp --HHHGGGGT
T ss_pred --HHHhhhhc
Confidence 45555566
No 40
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.08 E-value=2.3e-05 Score=63.15 Aligned_cols=77 Identities=18% Similarity=0.241 Sum_probs=58.0
Q ss_pred CcEEE--EhHHHHHHHHHHHHH-CCCEEecCCceeEEEEcCCCcEEEEEEcccc--cc----CCCCCCCCCCcCeEEEcC
Q psy9486 60 GNYVV--RLGHVVKWLGEQAEA-MGVEIYPGIPASEVLYHGDGSVKGIATGDVG--IA----KDGSPKDTFARGMELHAK 130 (165)
Q Consensus 60 ~~~~i--~r~~~d~~L~~~A~~-~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g--~~----~~g~~~~~~~~g~~i~Ak 130 (165)
++|.+ .+..+...|.+++.+ .||++++++.|+++..+ +++|.||.+.+.- .+ .+|+. .++.||
T Consensus 110 ~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~-~~~v~gv~~~~~~~~~~~~~g~~g~~-------~~i~ad 181 (284)
T 1rp0_A 110 DTYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GNRVGGVVTNWALVAQNHHTQSCMDP-------NVMEAK 181 (284)
T ss_dssp SSEEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEE-TTEEEEEEEEEHHHHTCTTTSSCCCC-------EEEEEE
T ss_pred CCEEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEec-CCeEEEEEEeccccccccCccccCce-------EEEECC
Confidence 34555 678899999999977 79999999999999886 6788898875200 00 11221 479999
Q ss_pred EEEEcccCCcccch
Q psy9486 131 VTIFAEGCHGHLTK 144 (165)
Q Consensus 131 ~VI~A~G~~s~l~~ 144 (165)
.||+|+|..|.+..
T Consensus 182 ~VV~AtG~~s~~~~ 195 (284)
T 1rp0_A 182 IVVSSCGHDGPFGA 195 (284)
T ss_dssp EEEECCCSSSTTTT
T ss_pred EEEECCCCchHHHH
Confidence 99999999887754
No 41
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.02 E-value=1.3e-05 Score=62.64 Aligned_cols=60 Identities=17% Similarity=0.195 Sum_probs=51.5
Q ss_pred EhHHHHHHHHHHHHHC-CCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 65 RLGHVVKWLGEQAEAM-GVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 65 ~r~~~d~~L~~~A~~~-Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
+|..+.++|.+.+++. |++++ .++|+++..+ ++++++|.+.+ |.+++|+.||+|+|.++.
T Consensus 66 ~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~-~~~v~~v~~~~---------------g~~i~a~~VV~A~G~~s~ 126 (232)
T 2cul_A 66 RVWAFHARAKYLLEGLRPLHLF-QATATGLLLE-GNRVVGVRTWE---------------GPPARGEKVVLAVGSFLG 126 (232)
T ss_dssp CHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEE-TTEEEEEEETT---------------SCCEECSEEEECCTTCSS
T ss_pred CHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEEe-CCEEEEEEECC---------------CCEEECCEEEECCCCChh
Confidence 6889999999999997 99999 4799999886 67888888865 347999999999999765
No 42
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.00 E-value=1.6e-05 Score=70.41 Aligned_cols=75 Identities=17% Similarity=0.140 Sum_probs=58.8
Q ss_pred EEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccc
Q psy9486 64 VRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLT 143 (165)
Q Consensus 64 i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~ 143 (165)
++-..+...|++.|++.|++|+++++|+++..+ +++|+||++.+. .+|+ +.+|+|+.||+|+|+|+
T Consensus 185 v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~-~~~v~gV~~~d~---~tg~-------~~~i~A~~VV~AaG~ws--- 250 (571)
T 2rgh_A 185 NNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYE-GDQIVGVKARDL---LTDE-------VIEIKAKLVINTSGPWV--- 250 (571)
T ss_dssp CCHHHHHHHHHHHHHHTTCEEESSEEEEEEEEE-TTEEEEEEEEET---TTCC-------EEEEEBSCEEECCGGGH---
T ss_pred EchHHHHHHHHHHHHHcCCeEEeccEEEEEEEe-CCEEEEEEEEEc---CCCC-------EEEEEcCEEEECCChhH---
Confidence 566788899999999999999999999999986 678899987531 0121 23799999999999996
Q ss_pred hHHHhhcCC
Q psy9486 144 KSLSSRFNL 152 (165)
Q Consensus 144 ~~l~~~~gl 152 (165)
.++.+..+.
T Consensus 251 ~~l~~~~g~ 259 (571)
T 2rgh_A 251 DKVRNLNFT 259 (571)
T ss_dssp HHHHTTCCS
T ss_pred HHHHHhhcc
Confidence 555555554
No 43
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.99 E-value=2.2e-05 Score=70.53 Aligned_cols=64 Identities=14% Similarity=0.101 Sum_probs=54.8
Q ss_pred cEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 61 NYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 61 ~~~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
+..++...+.+.|.+.|++.|++|+++++|++|..+ +++ ++|++.+ |.++.|+.||+|+|.++
T Consensus 411 ~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~-~~~-v~V~t~~---------------G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 411 GGWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRK-DDC-WLLNFAG---------------DQQATHSVVVLANGHQI 473 (676)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEE-TTE-EEEEETT---------------SCEEEESEEEECCGGGG
T ss_pred CeeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEe-CCe-EEEEECC---------------CCEEECCEEEECCCcch
Confidence 456788899999999999999999999999999986 455 4677764 35799999999999997
Q ss_pred c
Q psy9486 141 H 141 (165)
Q Consensus 141 ~ 141 (165)
.
T Consensus 474 ~ 474 (676)
T 3ps9_A 474 S 474 (676)
T ss_dssp G
T ss_pred h
Confidence 4
No 44
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=97.97 E-value=3.7e-05 Score=62.99 Aligned_cols=62 Identities=24% Similarity=0.241 Sum_probs=52.1
Q ss_pred cEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 61 NYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 61 ~~~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
...++...+.+.|.+.|++.|++|+++++|+++..+ ++. +.|++.+ | +++|+.||+|+|+++
T Consensus 143 ~g~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~-~~~-~~v~~~~---------------g-~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 143 SGFLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHD-DDG-VTIETAD---------------G-EYQAKKAIVCAGTWV 204 (372)
T ss_dssp CEEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEEC-SSS-EEEEESS---------------C-EEEEEEEEECCGGGG
T ss_pred CcEEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEc-CCE-EEEEECC---------------C-eEEcCEEEEcCCccH
Confidence 446778899999999999999999999999999886 344 3576654 3 699999999999987
No 45
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.94 E-value=2.5e-05 Score=65.28 Aligned_cols=90 Identities=14% Similarity=0.235 Sum_probs=62.8
Q ss_pred CcEEEE--hHHHHHHHHHHHHHC-CCEEecCCceeEEEEcC--C-C--cEEEEEEccccccCCCCCCCCCCcCeEEEc--
Q psy9486 60 GNYVVR--LGHVVKWLGEQAEAM-GVEIYPGIPASEVLYHG--D-G--SVKGIATGDVGIAKDGSPKDTFARGMELHA-- 129 (165)
Q Consensus 60 ~~~~i~--r~~~d~~L~~~A~~~-Gv~i~~~~~v~~i~~~~--~-g--~V~GV~~~~~g~~~~g~~~~~~~~g~~i~A-- 129 (165)
+.|.+. ...+...|.+++.+. ||++++++.|.+++.++ + + +|+||.+.+..++.+|...... .+..|.|
T Consensus 137 g~~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~-d~~~I~A~G 215 (326)
T 2gjc_A 137 GDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCM-DPNVIELAG 215 (326)
T ss_dssp SSEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCC-CCEEEEESC
T ss_pred CCeEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceecc-CceEEEEee
Confidence 445544 467888999999985 99999999999999863 3 5 9999988754334455211111 1357999
Q ss_pred -------------CEEEEcccCCcccchHHHhhc
Q psy9486 130 -------------KVTIFAEGCHGHLTKSLSSRF 150 (165)
Q Consensus 130 -------------k~VI~A~G~~s~l~~~l~~~~ 150 (165)
++||+|+|..+.+...+.+++
T Consensus 216 ~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~~~~~ 249 (326)
T 2gjc_A 216 YKNDGTRDLSQKHGVILSTTGHDGPFGAFCAKRI 249 (326)
T ss_dssp CCSSSCCCSSTTCCEEEECCCCC--CCSHHHHHH
T ss_pred ccccccccccccCCEEEECcCCCchHHHHHHhhc
Confidence 999999999999887766653
No 46
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.92 E-value=2e-05 Score=70.67 Aligned_cols=84 Identities=10% Similarity=0.065 Sum_probs=61.4
Q ss_pred CCcEEEEhHHHHHHHHHHHHHCCC--EEecCCceeEEEEcCC--CcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEE
Q psy9486 59 HGNYVVRLGHVVKWLGEQAEAMGV--EIYPGIPASEVLYHGD--GSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIF 134 (165)
Q Consensus 59 ~~~~~i~r~~~d~~L~~~A~~~Gv--~i~~~~~v~~i~~~~~--g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~ 134 (165)
...+.+++..+.++|.+.|++.|+ +|+.+++|+++..+++ +..+.|.+.+.+...+|.. .+++|++||+
T Consensus 133 ~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~-------~~i~a~~vVg 205 (639)
T 2dkh_A 133 FPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQI-------ETVQARYVVG 205 (639)
T ss_dssp SCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCE-------EEEEEEEEEE
T ss_pred CceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCe-------EEEEeCEEEE
Confidence 346789999999999999999988 9999999999988642 2223455432000012321 4799999999
Q ss_pred cccCCcccchHHHhhcCCC
Q psy9486 135 AEGCHGHLTKSLSSRFNLR 153 (165)
Q Consensus 135 A~G~~s~l~~~l~~~~gl~ 153 (165)
|+|++|.+.+. +|+.
T Consensus 206 ADG~~S~vR~~----lg~~ 220 (639)
T 2dkh_A 206 CDGARSNVRRA----IGRQ 220 (639)
T ss_dssp CCCTTCHHHHH----TTCC
T ss_pred CCCcchHHHHH----hCCC
Confidence 99999988666 5654
No 47
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=97.92 E-value=2.5e-05 Score=69.56 Aligned_cols=66 Identities=21% Similarity=0.290 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 67 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 67 ~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
..+.+.|.+++++.||+|++++.|++|+.+++++|+||.+.+. .+|+. ..|+|+.||+|+|.++.+
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~---~~g~~-------~~i~A~~VVlAtGg~~~~ 208 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCI---ETGEV-------VYFKARATVLATGGAGRI 208 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEET---TTCCE-------EEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEc---CCCeE-------EEEEcCEEEECCCCCccc
Confidence 5788899999999999999999999999854689999987531 13322 269999999999999854
No 48
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.90 E-value=3.2e-05 Score=63.65 Aligned_cols=69 Identities=14% Similarity=0.133 Sum_probs=54.7
Q ss_pred CCcEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccC
Q psy9486 59 HGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGC 138 (165)
Q Consensus 59 ~~~~~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~ 138 (165)
...+.+.|..|.+.|.+. ++..|.++++++++...+++.| .|.+.+ |.+++||+||.|+|.
T Consensus 104 ~~~~~i~R~~L~~~L~~~---~~~~v~~~~~v~~~~~~~~~~v-~v~~~d---------------G~~~~adlvVgADG~ 164 (412)
T 4hb9_A 104 EQRLSISRTELKEILNKG---LANTIQWNKTFVRYEHIENGGI-KIFFAD---------------GSHENVDVLVGADGS 164 (412)
T ss_dssp -CEEEEEHHHHHHHHHTT---CTTTEECSCCEEEEEECTTSCE-EEEETT---------------SCEEEESEEEECCCT
T ss_pred ccceEeeHHHHHHHHHhh---ccceEEEEEEEEeeeEcCCCeE-EEEECC---------------CCEEEeeEEEECCCC
Confidence 345789999999998764 4567999999999987656654 366654 568999999999999
Q ss_pred CcccchHH
Q psy9486 139 HGHLTKSL 146 (165)
Q Consensus 139 ~s~l~~~l 146 (165)
+|.+.+++
T Consensus 165 ~S~vR~~l 172 (412)
T 4hb9_A 165 NSKVRKQY 172 (412)
T ss_dssp TCHHHHHH
T ss_pred CcchHHHh
Confidence 99997774
No 49
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.86 E-value=7.4e-05 Score=64.79 Aligned_cols=72 Identities=15% Similarity=0.090 Sum_probs=57.1
Q ss_pred EEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 63 VVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 63 ~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
.++...+...|++.|++.|++|+++++|+++..+ + .+++|.+.+. .+|+. .+++|+.||+|+|.|+
T Consensus 145 ~v~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~-~-~~~~V~~~d~---~~G~~-------~~i~A~~VV~AtG~~s-- 210 (501)
T 2qcu_A 145 WVDDARLVLANAQMVVRKGGEVLTRTRATSARRE-N-GLWIVEAEDI---DTGKK-------YSWQARGLVNATGPWV-- 210 (501)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEECSEEEEEEEEE-T-TEEEEEEEET---TTCCE-------EEEEESCEEECCGGGH--
T ss_pred EEcHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEe-C-CEEEEEEEEC---CCCCE-------EEEECCEEEECCChhH--
Confidence 4688999999999999999999999999999885 3 6788888531 12211 2799999999999997
Q ss_pred chHHHhh
Q psy9486 143 TKSLSSR 149 (165)
Q Consensus 143 ~~~l~~~ 149 (165)
..+.+.
T Consensus 211 -~~l~~~ 216 (501)
T 2qcu_A 211 -KQFFDD 216 (501)
T ss_dssp -HHHHHH
T ss_pred -HHHHHH
Confidence 455443
No 50
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.84 E-value=4.8e-05 Score=68.60 Aligned_cols=64 Identities=14% Similarity=0.017 Sum_probs=53.3
Q ss_pred cEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCe-EEEcCEEEEcccCC
Q psy9486 61 NYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGM-ELHAKVTIFAEGCH 139 (165)
Q Consensus 61 ~~~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~-~i~Ak~VI~A~G~~ 139 (165)
+..++...+.+.|.+.|++.|++|+++++|++|..+ ++. ++|++.+ |. ++.|+.||+|+|.+
T Consensus 406 ~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~-~~~-v~V~t~~---------------G~~~i~Ad~VVlAtG~~ 468 (689)
T 3pvc_A 406 GGWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRI-DSQ-WQLTFGQ---------------SQAAKHHATVILATGHR 468 (689)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEC-SSS-EEEEEC----------------CCCCEEESEEEECCGGG
T ss_pred CeEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEe-CCe-EEEEeCC---------------CcEEEECCEEEECCCcc
Confidence 345678899999999999999999999999999986 455 4677764 34 69999999999999
Q ss_pred cc
Q psy9486 140 GH 141 (165)
Q Consensus 140 s~ 141 (165)
+.
T Consensus 469 s~ 470 (689)
T 3pvc_A 469 LP 470 (689)
T ss_dssp TT
T ss_pred hh
Confidence 74
No 51
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=97.80 E-value=3.9e-05 Score=69.01 Aligned_cols=65 Identities=20% Similarity=0.280 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 67 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 67 ~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
..+.+.|.+++++.||+|++++.|.+|+.+ +++|+||.+.+. .+|+. ..|+|+.||+|+|.++.+
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~-~g~v~Gv~~~~~---~~G~~-------~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLME-NGECRGVIALCI---EDGTI-------HRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEE-TTEEEEEEEEET---TTCCE-------EEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEE-CCEEEEEEEEEc---CCCcE-------EEEEcCeEEECCCccccc
Confidence 478889999999999999999999999986 789999987531 13432 369999999999999854
No 52
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=97.80 E-value=7.2e-05 Score=63.93 Aligned_cols=71 Identities=17% Similarity=0.242 Sum_probs=56.3
Q ss_pred EhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc--
Q psy9486 65 RLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL-- 142 (165)
Q Consensus 65 ~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l-- 142 (165)
++..+.+.|.+.+++.||+|+++++|+++..+ ++. +.|.+.+ | +++||.||+|+|.+|.-
T Consensus 130 ~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~-~~~-~~V~~~~---------------g-~i~ad~VIlAtG~~S~p~~ 191 (417)
T 3v76_A 130 SAKDIIRMLMAEMKEAGVQLRLETSIGEVERT-ASG-FRVTTSA---------------G-TVDAASLVVASGGKSIPKM 191 (417)
T ss_dssp CHHHHHHHHHHHHHHHTCEEECSCCEEEEEEE-TTE-EEEEETT---------------E-EEEESEEEECCCCSSCGGG
T ss_pred CHHHHHHHHHHHHHHCCCEEEECCEEEEEEEe-CCE-EEEEECC---------------c-EEEeeEEEECCCCccCCCC
Confidence 46689999999999999999999999999886 343 5677765 3 89999999999999831
Q ss_pred -----chHHHhhcCCC
Q psy9486 143 -----TKSLSSRFNLR 153 (165)
Q Consensus 143 -----~~~l~~~~gl~ 153 (165)
..++.+++|+.
T Consensus 192 gs~g~g~~la~~~G~~ 207 (417)
T 3v76_A 192 GATGLAYRIAEQFGLP 207 (417)
T ss_dssp TCCCHHHHHHHHTTCC
T ss_pred CCCcHHHHHHHHCCCC
Confidence 13455557764
No 53
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.77 E-value=5.2e-05 Score=66.32 Aligned_cols=58 Identities=16% Similarity=0.186 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCC
Q psy9486 67 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 139 (165)
Q Consensus 67 ~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~ 139 (165)
..+.+.|++.+++.|++|+++++|++|..+++|+++||++.+ |.++.|+.||.|.|..
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~---------------G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSD---------------GEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETT---------------SCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECC---------------CcEEECCEEEECCCcc
Confidence 578889999999999999999999999994478999999975 4579999999999987
No 54
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.77 E-value=7.6e-05 Score=62.55 Aligned_cols=74 Identities=22% Similarity=0.321 Sum_probs=56.7
Q ss_pred CcEEEEhHHHHHHHHHHHHH-CC-CEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEccc
Q psy9486 60 GNYVVRLGHVVKWLGEQAEA-MG-VEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEG 137 (165)
Q Consensus 60 ~~~~i~r~~~d~~L~~~A~~-~G-v~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G 137 (165)
..+.++|..|+++|.+.+++ .| ++|+++++|+++.. +++ |. |.+.+. .+|+. .+++|++||+|+|
T Consensus 100 ~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~-v~-v~~~~~---~~g~~-------~~~~ad~vV~AdG 166 (410)
T 3c96_A 100 PQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDG-RV-LIGARD---GHGKP-------QALGADVLVGADG 166 (410)
T ss_dssp CEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETT-EE-EEEEEE---TTSCE-------EEEEESEEEECCC
T ss_pred CeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCc-cE-EEEecC---CCCCc-------eEEecCEEEECCC
Confidence 36899999999999999987 47 58999999999987 444 33 444320 12321 4799999999999
Q ss_pred CCcccchHH
Q psy9486 138 CHGHLTKSL 146 (165)
Q Consensus 138 ~~s~l~~~l 146 (165)
.+|.+.+.+
T Consensus 167 ~~S~vR~~l 175 (410)
T 3c96_A 167 IHSAVRAHL 175 (410)
T ss_dssp TTCHHHHHH
T ss_pred ccchhHHHh
Confidence 999997764
No 55
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=97.77 E-value=5.8e-05 Score=68.30 Aligned_cols=65 Identities=23% Similarity=0.307 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 67 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 67 ~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
..+...|.+++++.||+|++++.|.+|+.+ +++|+||.+.+. .+|+. ..|+|+.||+|+|.++.+
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~-~g~v~Gv~~~~~---~~G~~-------~~i~A~~VVlATGG~~~~ 222 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIHQ-DGKCYGAVVRDL---VTGDI-------IAYVAKGTLIATGGYGRI 222 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEE-TTEEEEEEEEET---TTCCE-------EEEECSEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEec-CCEEEEEEEEEC---CCCcE-------EEEEcCEEEEccCcchhh
Confidence 368889999999999999999999999986 689999977531 13322 259999999999999854
No 56
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=97.76 E-value=6.7e-05 Score=62.60 Aligned_cols=58 Identities=24% Similarity=0.278 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 67 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 67 ~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
..+.+.|.+.+++.|++|+++++|++|..+ +++++||.+.. .++.||.||+|+|.+..
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~-~~~~~gv~~~g----------------~~~~ad~VV~a~~~~~~ 253 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIE-NGKAAGIIADD----------------RIHDADLVISNLGHAAT 253 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETT----------------EEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEE-CCEEEEEEECC----------------EEEECCEEEECCCHHHH
Confidence 457888999999999999999999999986 68888998852 58999999999998754
No 57
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.68 E-value=5.4e-05 Score=63.23 Aligned_cols=67 Identities=12% Similarity=-0.020 Sum_probs=54.1
Q ss_pred CcEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCC
Q psy9486 60 GNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 139 (165)
Q Consensus 60 ~~~~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~ 139 (165)
..+.++|..|.++|.+.+.+ ++|+++++|+++..+ ++.+ .|.+.+ |.+++||+||+|+|.+
T Consensus 121 ~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~-~~~v-~v~~~~---------------g~~~~ad~vV~AdG~~ 181 (398)
T 2xdo_A 121 DNPEINRNDLRAILLNSLEN--DTVIWDRKLVMLEPG-KKKW-TLTFEN---------------KPSETADLVILANGGM 181 (398)
T ss_dssp SCCEECHHHHHHHHHHTSCT--TSEEESCCEEEEEEC-SSSE-EEEETT---------------SCCEEESEEEECSCTT
T ss_pred CCceECHHHHHHHHHhhcCC--CEEEECCEEEEEEEC-CCEE-EEEECC---------------CcEEecCEEEECCCcc
Confidence 34679999999999988764 689999999999886 3444 366654 3479999999999999
Q ss_pred cccchH
Q psy9486 140 GHLTKS 145 (165)
Q Consensus 140 s~l~~~ 145 (165)
|.+.+.
T Consensus 182 S~vR~~ 187 (398)
T 2xdo_A 182 SKVRKF 187 (398)
T ss_dssp CSCCTT
T ss_pred hhHHhh
Confidence 999776
No 58
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.67 E-value=0.00013 Score=64.00 Aligned_cols=72 Identities=14% Similarity=0.206 Sum_probs=56.0
Q ss_pred CCcEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccC
Q psy9486 59 HGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGC 138 (165)
Q Consensus 59 ~~~~~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~ 138 (165)
..++.+.+..+.++|.+.|++. |+++++|+++..+ ++.|+ |.+.+. .+|+. .+++|++||+|+|+
T Consensus 130 ~~~~~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~-~~~v~-v~~~~~---~~G~~-------~~i~a~~vVgADG~ 194 (549)
T 2r0c_A 130 EPDAICPQHWLAPLLAEAVGER---LRTRSRLDSFEQR-DDHVR-ATITDL---RTGAT-------RAVHARYLVACDGA 194 (549)
T ss_dssp SCCEECCHHHHHHHHHHHHGGG---EECSEEEEEEEEC-SSCEE-EEEEET---TTCCE-------EEEEEEEEEECCCT
T ss_pred CcccccCHHHHHHHHHHHHHHh---cccCcEEEEEEEe-CCEEE-EEEEEC---CCCCE-------EEEEeCEEEECCCC
Confidence 3468999999999999999988 9999999999886 44454 444320 12321 47999999999999
Q ss_pred CcccchH
Q psy9486 139 HGHLTKS 145 (165)
Q Consensus 139 ~s~l~~~ 145 (165)
+|.+.+.
T Consensus 195 ~S~vR~~ 201 (549)
T 2r0c_A 195 SSPTRKA 201 (549)
T ss_dssp TCHHHHH
T ss_pred CcHHHHH
Confidence 9988766
No 59
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.67 E-value=0.00015 Score=60.41 Aligned_cols=67 Identities=16% Similarity=0.034 Sum_probs=54.2
Q ss_pred EEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 62 YVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 62 ~~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
..+.+..+.+.|.+.+ .|++|+++++|+++..+ ++.+. |.+.+ |.+++|++||+|+|.+|.
T Consensus 94 ~~~~~~~l~~~L~~~~--~~~~i~~~~~v~~i~~~-~~~v~-v~~~~---------------g~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 94 RFTSYDSIYGGLYELF--GPERYHTSKCLVGLSQD-SETVQ-MRFSD---------------GTKAEANWVIGADGGASV 154 (397)
T ss_dssp CEEEHHHHHHHHHHHH--CSTTEETTCCEEEEEEC-SSCEE-EEETT---------------SCEEEESEEEECCCTTCH
T ss_pred cccCHHHHHHHHHHhC--CCcEEEcCCEEEEEEec-CCEEE-EEECC---------------CCEEECCEEEECCCcchh
Confidence 3578899999998876 59999999999999886 44443 66654 357999999999999999
Q ss_pred cchHHH
Q psy9486 142 LTKSLS 147 (165)
Q Consensus 142 l~~~l~ 147 (165)
+.+.+.
T Consensus 155 vr~~~~ 160 (397)
T 2vou_A 155 VRKRLL 160 (397)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 877754
No 60
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.67 E-value=0.00013 Score=54.13 Aligned_cols=67 Identities=21% Similarity=0.255 Sum_probs=52.6
Q ss_pred EEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccc
Q psy9486 64 VRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLT 143 (165)
Q Consensus 64 i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~ 143 (165)
+....+.++|.+.+++.|++++++ +|+++..++ +. +.|.+.+ | ++.|+.||+|+|.++.+.
T Consensus 53 ~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~-~~-~~v~~~~---------------g-~i~ad~vI~A~G~~~~~~ 113 (180)
T 2ywl_A 53 PSGEELLRRLEAHARRYGAEVRPG-VVKGVRDMG-GV-FEVETEE---------------G-VEKAERLLLCTHKDPTLP 113 (180)
T ss_dssp CCHHHHHHHHHHHHHHTTCEEEEC-CCCEEEECS-SS-EEEECSS---------------C-EEEEEEEEECCTTCCHHH
T ss_pred CCHHHHHHHHHHHHHHcCCEEEeC-EEEEEEEcC-CE-EEEEECC---------------C-EEEECEEEECCCCCCCcc
Confidence 456789999999999999999999 999998753 33 3466654 4 799999999999998553
Q ss_pred hHHHhhcCCC
Q psy9486 144 KSLSSRFNLR 153 (165)
Q Consensus 144 ~~l~~~~gl~ 153 (165)
+. +|+.
T Consensus 114 ~~----~g~~ 119 (180)
T 2ywl_A 114 SL----LGLT 119 (180)
T ss_dssp HH----HTCC
T ss_pred cc----CCCC
Confidence 43 5654
No 61
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.62 E-value=0.00016 Score=65.42 Aligned_cols=62 Identities=15% Similarity=0.203 Sum_probs=53.9
Q ss_pred EEEEhHHHHHHHHHHHHH-CCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 62 YVVRLGHVVKWLGEQAEA-MGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 62 ~~i~r~~~d~~L~~~A~~-~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
+.++|..+.+.|.+.+++ .|++|+ .+.|++|..+ +++|+||.+.+ |..+.|+.||+|+|.++
T Consensus 118 ~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e-~g~V~GV~t~d---------------G~~i~AdaVVLATG~~s 180 (637)
T 2zxi_A 118 AQADKKRYREYMKKVCENQENLYIK-QEEVVDIIVK-NNQVVGVRTNL---------------GVEYKTKAVVVTTGTFL 180 (637)
T ss_dssp EEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEES-SSBEEEEEETT---------------SCEEECSEEEECCTTCB
T ss_pred hhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEec-CCEEEEEEECC---------------CcEEEeCEEEEccCCCc
Confidence 578899999999999998 699996 5799999886 68899999875 45899999999999875
No 62
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.60 E-value=0.00031 Score=58.88 Aligned_cols=70 Identities=16% Similarity=0.345 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccchHH
Q psy9486 67 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLTKSL 146 (165)
Q Consensus 67 ~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~~l 146 (165)
..+.++|.+..++.||+|++++.|+++..+ ++++.+|.+.+ |.++.||.||+|+|..... .+
T Consensus 184 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v~~V~~~d---------------G~~i~aD~Vv~a~G~~p~~--~l 245 (404)
T 3fg2_P 184 PEISSYFHDRHSGAGIRMHYGVRATEIAAE-GDRVTGVVLSD---------------GNTLPCDLVVVGVGVIPNV--EI 245 (404)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETT---------------SCEEECSEEEECCCEEECC--HH
T ss_pred HHHHHHHHHHHHhCCcEEEECCEEEEEEec-CCcEEEEEeCC---------------CCEEEcCEEEECcCCccCH--HH
Confidence 356778888999999999999999999875 68888999876 4689999999999987754 45
Q ss_pred HhhcCCCC
Q psy9486 147 SSRFNLRG 154 (165)
Q Consensus 147 ~~~~gl~~ 154 (165)
.+..|+..
T Consensus 246 ~~~~gl~~ 253 (404)
T 3fg2_P 246 AAAAGLPT 253 (404)
T ss_dssp HHHTTCCB
T ss_pred HHhCCCCC
Confidence 66677753
No 63
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=97.60 E-value=0.00015 Score=65.67 Aligned_cols=63 Identities=14% Similarity=0.162 Sum_probs=54.4
Q ss_pred EEEEhHHHHHHHHHHHHH-CCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 62 YVVRLGHVVKWLGEQAEA-MGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 62 ~~i~r~~~d~~L~~~A~~-~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
+.+++..+.+.|.+.+++ .|++|+ .+.|+++..+ +++|+||.+.+ |..|.|+.||+|+|.++
T Consensus 119 ~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~e-~g~V~GV~t~d---------------G~~I~Ad~VVLATGt~s 181 (651)
T 3ces_A 119 AQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIVE-NDRVVGAVTQM---------------GLKFRAKAVVLTVGTFL 181 (651)
T ss_dssp EEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEES-SSBEEEEEETT---------------SEEEEEEEEEECCSTTT
T ss_pred hhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEec-CCEEEEEEECC---------------CCEEECCEEEEcCCCCc
Confidence 578899999999999998 799996 5699999885 68899999875 46899999999999986
Q ss_pred c
Q psy9486 141 H 141 (165)
Q Consensus 141 ~ 141 (165)
.
T Consensus 182 ~ 182 (651)
T 3ces_A 182 D 182 (651)
T ss_dssp C
T ss_pred c
Confidence 4
No 64
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.60 E-value=0.00012 Score=65.42 Aligned_cols=65 Identities=18% Similarity=0.368 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHCC-CEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 67 GHVVKWLGEQAEAMG-VEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 67 ~~~d~~L~~~A~~~G-v~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
..+.+.|.+++++.| |+|++++.|.+|+.+ +++|+||.+.+. .+|+. ..|+|+.||+|+|.+|.+
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~-~g~v~Gv~~~~~---~~G~~-------~~i~A~~VVlAtGg~s~~ 199 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVD-DGHVRGLVAMNM---MEGTL-------VQIRANAVVMATGGAGRV 199 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEE-TTEEEEEEEEET---TTTEE-------EEEECSCEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEe-CCEEEEEEEEEc---CCCcE-------EEEEcCeEEECCCCCccc
Confidence 478889999999999 999999999999986 689999876431 12321 269999999999999866
No 65
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.59 E-value=0.00039 Score=58.42 Aligned_cols=70 Identities=17% Similarity=0.227 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccchHH
Q psy9486 67 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLTKSL 146 (165)
Q Consensus 67 ~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~~l 146 (165)
..+.+++.+..++.||+|++++.|+++..+ ++++.+|++.+ |.++.||.||+|+|..... .+
T Consensus 194 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v~~v~l~d---------------G~~i~aD~Vv~a~G~~p~~--~l 255 (415)
T 3lxd_A 194 EALSEFYQAEHRAHGVDLRTGAAMDCIEGD-GTKVTGVRMQD---------------GSVIPADIVIVGIGIVPCV--GA 255 (415)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEES-SSBEEEEEESS---------------SCEEECSEEEECSCCEESC--HH
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEec-CCcEEEEEeCC---------------CCEEEcCEEEECCCCccCh--HH
Confidence 456777888889999999999999999875 68888999876 4689999999999998754 45
Q ss_pred HhhcCCCC
Q psy9486 147 SSRFNLRG 154 (165)
Q Consensus 147 ~~~~gl~~ 154 (165)
.+..|+..
T Consensus 256 ~~~~gl~~ 263 (415)
T 3lxd_A 256 LISAGASG 263 (415)
T ss_dssp HHHTTCCC
T ss_pred HHhCCCCc
Confidence 66677653
No 66
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=97.58 E-value=7.8e-05 Score=67.52 Aligned_cols=70 Identities=13% Similarity=0.106 Sum_probs=55.4
Q ss_pred EEEhHHHHHHHHHHHHHC--CCEEecCCceeEEEEcCC--CcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccC
Q psy9486 63 VVRLGHVVKWLGEQAEAM--GVEIYPGIPASEVLYHGD--GSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGC 138 (165)
Q Consensus 63 ~i~r~~~d~~L~~~A~~~--Gv~i~~~~~v~~i~~~~~--g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~ 138 (165)
.+....+.+.|.+++++. ||+|++++.|.+|+.+++ |+|+||.+.+. .+|+. ..|+|+.||+|+|.
T Consensus 162 ~~~G~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~---~~g~~-------~~i~Ak~VVLATGG 231 (662)
T 3gyx_A 162 MINGESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNL---RANEV-------HIFKANAMVVACGG 231 (662)
T ss_dssp EEEETSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEES---SSSCE-------EEEECSEEEECCCC
T ss_pred cCCHHHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEc---CCCcE-------EEEEeCEEEECCCc
Confidence 344567888999999998 999999999999999743 39999977531 23432 36999999999999
Q ss_pred Cccc
Q psy9486 139 HGHL 142 (165)
Q Consensus 139 ~s~l 142 (165)
.+.+
T Consensus 232 ~g~~ 235 (662)
T 3gyx_A 232 AVNV 235 (662)
T ss_dssp BCSS
T ss_pred cccc
Confidence 8854
No 67
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.56 E-value=0.00016 Score=65.27 Aligned_cols=87 Identities=10% Similarity=0.206 Sum_probs=58.6
Q ss_pred CCcEEEEhHHHHHHHHHHHHHCC---CEEecCCceeEEEEcC------CCcEEEEEEcccc-----------ccCCCCCC
Q psy9486 59 HGNYVVRLGHVVKWLGEQAEAMG---VEIYPGIPASEVLYHG------DGSVKGIATGDVG-----------IAKDGSPK 118 (165)
Q Consensus 59 ~~~~~i~r~~~d~~L~~~A~~~G---v~i~~~~~v~~i~~~~------~g~V~GV~~~~~g-----------~~~~g~~~ 118 (165)
...+.+.|..+.++|.+.+++.| ++|..++.|+++..++ ++.-+.|.+.+.. ...+|-..
T Consensus 111 ~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (665)
T 1pn0_A 111 YHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYPVTMTLRYMSEDESTPLQFGHKTENGLFR 190 (665)
T ss_dssp SCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCCCEEEEEEECCGGGSCCCTTCCCCCSSSCC
T ss_pred CeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccCCCCCEEEEEEeccccccccccccccccccccc
Confidence 34688999999999999999988 9999999999998864 1111334333200 00001000
Q ss_pred CCC----------------CcC--eEEEcCEEEEcccCCcccchH
Q psy9486 119 DTF----------------ARG--MELHAKVTIFAEGCHGHLTKS 145 (165)
Q Consensus 119 ~~~----------------~~g--~~i~Ak~VI~A~G~~s~l~~~ 145 (165)
.++ ..| .+++|++||.|+|++|.+.++
T Consensus 191 ~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~VR~~ 235 (665)
T 1pn0_A 191 SNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVRRT 235 (665)
T ss_dssp CHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHHHHH
T ss_pred ccccccccccccccccccCCCCceEEEEeCEEEeccCCCCHHHHh
Confidence 000 112 479999999999999998777
No 68
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=97.56 E-value=0.00027 Score=59.90 Aligned_cols=72 Identities=15% Similarity=0.147 Sum_probs=55.2
Q ss_pred EhHHHHHHHHHHHHHCCCEEecCCceeEEEEcC---CCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 65 RLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHG---DGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 65 ~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~---~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
++..+.+.|.+.+++.||+|+++++|+++..++ ++. +.|.+.+ + +++|+.||+|+|.++.
T Consensus 107 ~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~-~~v~~~~---------------g-~i~ad~VVlAtG~~s~ 169 (401)
T 2gqf_A 107 GAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVR-FVLQVNS---------------T-QWQCKNLIVATGGLSM 169 (401)
T ss_dssp CTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCC-EEEEETT---------------E-EEEESEEEECCCCSSC
T ss_pred CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCe-EEEEECC---------------C-EEECCEEEECCCCccC
Confidence 577888999999999999999999999998751 233 4566654 3 7999999999999983
Q ss_pred c-------chHHHhhcCCC
Q psy9486 142 L-------TKSLSSRFNLR 153 (165)
Q Consensus 142 l-------~~~l~~~~gl~ 153 (165)
- ..++.+++|+.
T Consensus 170 p~~g~~G~g~~la~~~G~~ 188 (401)
T 2gqf_A 170 PGLGATPFGYQIAEQFGIP 188 (401)
T ss_dssp GGGTCCSHHHHHHHHTTCC
T ss_pred CCCCCChHHHHHHHHCCCC
Confidence 2 12445557764
No 69
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=97.54 E-value=8e-05 Score=65.60 Aligned_cols=66 Identities=17% Similarity=0.136 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHH-CCCEEecCCceeEEEEcCCC------cEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCC
Q psy9486 67 GHVVKWLGEQAEA-MGVEIYPGIPASEVLYHGDG------SVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 139 (165)
Q Consensus 67 ~~~d~~L~~~A~~-~Gv~i~~~~~v~~i~~~~~g------~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~ 139 (165)
..+.+.|.+++++ .||+|++++.|.+|+.++++ +|+||.+.+. .+|+. ..|.|+.||+|+|.+
T Consensus 138 ~~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~---~~G~~-------~~i~A~~VVlAtGg~ 207 (540)
T 1chu_A 138 REVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNR---NKETV-------ETCHAKAVVLATGGA 207 (540)
T ss_dssp ----CCCHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEET---TTTEE-------EEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEc---CCCcE-------EEEEcCeEEECCCCc
Confidence 4567788999998 79999999999999984346 8999988641 12321 279999999999999
Q ss_pred ccc
Q psy9486 140 GHL 142 (165)
Q Consensus 140 s~l 142 (165)
+.+
T Consensus 208 ~~~ 210 (540)
T 1chu_A 208 SKV 210 (540)
T ss_dssp GGG
T ss_pred ccc
Confidence 865
No 70
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=97.48 E-value=0.00024 Score=61.35 Aligned_cols=61 Identities=23% Similarity=0.284 Sum_probs=50.7
Q ss_pred hHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 66 LGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 66 r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
...+.+.|.+++++.|++|++++.| +++.+ +++|+||.+.+. +.++.|+.||+|+|.++.+
T Consensus 118 g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~-~~~v~Gv~v~~~--------------~g~~~a~~VVlAtGg~~~~ 178 (472)
T 2e5v_A 118 GREIFNFLLKLAREEGIPIIEDRLV-EIRVK-DGKVTGFVTEKR--------------GLVEDVDKLVLATGGYSYL 178 (472)
T ss_dssp HHHHHHHHHHHHHHTTCCEECCCEE-EEEEE-TTEEEEEEETTT--------------EEECCCSEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHHhCCCEEEECcEE-EEEEe-CCEEEEEEEEeC--------------CCeEEeeeEEECCCCCccc
Confidence 4578889999998899999999999 99886 688999877531 1367899999999999865
No 71
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.47 E-value=0.00033 Score=63.43 Aligned_cols=63 Identities=14% Similarity=0.188 Sum_probs=53.6
Q ss_pred cEEEEhHHHHHHHHHHHHH-CCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCC
Q psy9486 61 NYVVRLGHVVKWLGEQAEA-MGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 139 (165)
Q Consensus 61 ~~~i~r~~~d~~L~~~A~~-~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~ 139 (165)
.+.++|..+...|.+.+++ .|++|+.+ .|+++..+ +++|.||.+.+ |..+.|+.||+|+|.+
T Consensus 111 r~~~Dr~~l~~~L~~~l~~~~GV~I~~~-~V~~L~~d-~g~V~GV~t~~---------------G~~i~Ad~VVLATG~~ 173 (641)
T 3cp8_A 111 RAQADKTQYSLYMRRIVEHEPNIDLLQD-TVIGVSAN-SGKFSSVTVRS---------------GRAIQAKAAILACGTF 173 (641)
T ss_dssp EEEECHHHHHHHHHHHHHTCTTEEEEEC-CEEEEEEE-TTEEEEEEETT---------------SCEEEEEEEEECCTTC
T ss_pred hhhcCHHHHHHHHHHHHHhCCCCEEEee-EEEEEEec-CCEEEEEEECC---------------CcEEEeCEEEECcCCC
Confidence 3578999999999999988 49999755 89999886 68899998875 4589999999999988
Q ss_pred c
Q psy9486 140 G 140 (165)
Q Consensus 140 s 140 (165)
+
T Consensus 174 s 174 (641)
T 3cp8_A 174 L 174 (641)
T ss_dssp B
T ss_pred C
Confidence 4
No 72
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=97.45 E-value=0.00031 Score=56.43 Aligned_cols=62 Identities=16% Similarity=0.197 Sum_probs=51.5
Q ss_pred EEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 62 YVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 62 ~~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
...++..+.++|.+.+++.|++++++++|+++..+ ++.+.+|.+.+ + ++.++.||+|+|.++
T Consensus 71 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~-~~~~~~v~~~~---------------g-~~~~d~vV~AtG~~~ 132 (357)
T 4a9w_A 71 PYPARAEVLAYLAQYEQKYALPVLRPIRVQRVSHF-GERLRVVARDG---------------R-QWLARAVISATGTWG 132 (357)
T ss_dssp SSCBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEE-TTEEEEEETTS---------------C-EEEEEEEEECCCSGG
T ss_pred CCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEC-CCcEEEEEeCC---------------C-EEEeCEEEECCCCCC
Confidence 34578999999999999999999999999999886 45544466654 3 899999999999865
No 73
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=97.44 E-value=0.00023 Score=63.95 Aligned_cols=66 Identities=24% Similarity=0.240 Sum_probs=52.1
Q ss_pred hHHHHHHHHHHHHHC-CC-EEecCCceeEEEEcCCC---cEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 66 LGHVVKWLGEQAEAM-GV-EIYPGIPASEVLYHGDG---SVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 66 r~~~d~~L~~~A~~~-Gv-~i~~~~~v~~i~~~~~g---~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
-..+.+.|.+.+++. || +|++++.|.+|+.+ ++ +|+||.+.+. .+|+. ..|+|+.||+|+|.++
T Consensus 150 g~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~-~~~~g~v~Gv~~~~~---~~g~~-------~~i~A~~VVlAtGG~~ 218 (643)
T 1jnr_A 150 GESYKPIIAEAAKMAVGEENIYERVFIFELLKD-NNDPNAVAGAVGFSV---REPKF-------YVFKAKAVILATGGAT 218 (643)
T ss_dssp ETTHHHHHHHHHHHHHCGGGEECSEEEEEEEEC-TTCTTBEEEEEEEES---SSSCE-------EEEECSEEEECCCCBC
T ss_pred cHHHHHHHHHHHHhcCCCcEEEecCEEEEEEEc-CCccceeEEEEEEEe---cCCcE-------EEEEcCEEEECCCccc
Confidence 345788899999988 99 99999999999986 45 9999976421 13321 3699999999999998
Q ss_pred cc
Q psy9486 141 HL 142 (165)
Q Consensus 141 ~l 142 (165)
.+
T Consensus 219 ~~ 220 (643)
T 1jnr_A 219 LL 220 (643)
T ss_dssp SS
T ss_pred cc
Confidence 64
No 74
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=97.43 E-value=0.00016 Score=62.91 Aligned_cols=73 Identities=18% Similarity=0.012 Sum_probs=55.5
Q ss_pred EEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcC-CCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 62 YVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHG-DGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 62 ~~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~-~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
+.+++..+.+.|.+.+++.|++|+++++|+++..++ ++..++|.+.+. .+|+. .+++|+.||+|+|++|
T Consensus 161 ~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~---~~g~~-------~~i~ad~VV~A~G~~S 230 (497)
T 2bry_A 161 DHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPN---PPAQL-------ASYEFDVLISAAGGKF 230 (497)
T ss_dssp CEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESC---CCHHH-------HTCCBSEEEECCCTTC
T ss_pred ccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEEC---CCCCE-------EEEEcCEEEECCCCCc
Confidence 468889999999999999999999999999998742 244456766320 01210 3589999999999999
Q ss_pred ccch
Q psy9486 141 HLTK 144 (165)
Q Consensus 141 ~l~~ 144 (165)
.+.+
T Consensus 231 ~~r~ 234 (497)
T 2bry_A 231 VPEG 234 (497)
T ss_dssp CCTT
T ss_pred cccc
Confidence 8853
No 75
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.38 E-value=0.00044 Score=59.13 Aligned_cols=58 Identities=21% Similarity=0.263 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEcC-CCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 67 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHG-DGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 67 ~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~-~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
..+.+.|++.+++.|++|+++++|++|..+. ++++++|++. |.++.|+.||.|.|.++
T Consensus 242 ~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~~----------------g~~~~ad~VV~a~~~~~ 300 (453)
T 2bcg_G 242 GELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKTK----------------LGTFKAPLVIADPTYFP 300 (453)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEET----------------TEEEECSCEEECGGGCG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEEC----------------CeEEECCEEEECCCccc
Confidence 4788899999999999999999999998852 5788898874 35899999999999986
No 76
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.32 E-value=0.00037 Score=59.31 Aligned_cols=58 Identities=16% Similarity=0.254 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 67 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 67 ~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
..+.+.|++.+++.|++|+++++|++|..+ ++++++|.+. |.+++||.||.|.|.++.
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~-~~~v~~v~~~----------------g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIME-NGKVVGVKSE----------------GEVARCKQLICDPSYVPD 291 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEEE-TTEEEEEEET----------------TEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEe-CCEEEEEEEC----------------CeEEECCEEEECCCCCcc
Confidence 478889999999999999999999999986 6888888764 358999999999999864
No 77
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.27 E-value=0.001 Score=58.00 Aligned_cols=71 Identities=15% Similarity=0.273 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEE--EEEEccccccCCCCCCCCCCcCe-EEEcCEEEEcccCCcccc
Q psy9486 67 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVK--GIATGDVGIAKDGSPKDTFARGM-ELHAKVTIFAEGCHGHLT 143 (165)
Q Consensus 67 ~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~--GV~~~~~g~~~~g~~~~~~~~g~-~i~Ak~VI~A~G~~s~l~ 143 (165)
..+.+.|.+.+++.||+|+++++|+++..+++++|. .|.+.+ |. ++.||.||+|+|.+....
T Consensus 255 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~---------------G~~~i~aD~Vv~A~G~~p~~~ 319 (523)
T 1mo9_A 255 NETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPN---------------GEMRIETDFVFLGLGEQPRSA 319 (523)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETT---------------EEEEEECSCEEECCCCEECCH
T ss_pred HHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECC---------------CcEEEEcCEEEECcCCccCCc
Confidence 356678888999999999999999999875456663 455543 34 799999999999998764
Q ss_pred hHHHhhcCCC
Q psy9486 144 KSLSSRFNLR 153 (165)
Q Consensus 144 ~~l~~~~gl~ 153 (165)
. +.+..|+.
T Consensus 320 ~-~l~~~gl~ 328 (523)
T 1mo9_A 320 E-LAKILGLD 328 (523)
T ss_dssp H-HHHHHTCC
T ss_pred c-CHHHcCCc
Confidence 3 56667764
No 78
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.18 E-value=0.0001 Score=61.27 Aligned_cols=65 Identities=15% Similarity=0.074 Sum_probs=52.1
Q ss_pred CcEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCC
Q psy9486 60 GNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 139 (165)
Q Consensus 60 ~~~~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~ 139 (165)
..+.+.|..|.++|.+++++.||+|+++++|+++.. . . .+.|+.||+|+|.+
T Consensus 91 ~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~---------~-----------------~~~ad~vV~AdG~~ 142 (381)
T 3c4a_A 91 LLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGE--L---------P-----------------LADYDLVVLANGVN 142 (381)
T ss_dssp CEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGG--C---------C-----------------GGGCSEEEECCGGG
T ss_pred ceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchh--c---------c-----------------cccCCEEEECCCCC
Confidence 357999999999999999999999999999888731 1 1 25689999999999
Q ss_pred cccchHHHhhcCCC
Q psy9486 140 GHLTKSLSSRFNLR 153 (165)
Q Consensus 140 s~l~~~l~~~~gl~ 153 (165)
|. .+.+.+.++..
T Consensus 143 S~-R~~l~~~~g~~ 155 (381)
T 3c4a_A 143 HK-TAHFTEALVPQ 155 (381)
T ss_dssp GG-TCCSSGGGCCC
T ss_pred ch-HHhhhhhcCCC
Confidence 98 66654445543
No 79
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.12 E-value=0.0019 Score=54.77 Aligned_cols=69 Identities=22% Similarity=0.257 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEc-CCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccchHH
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYH-GDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLTKSL 146 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~-~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~~l 146 (165)
.+..+|.+.+++.||++++++.|+++..+ +++++.+|.+.+ |.++.||.||+|+|..... .+
T Consensus 192 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~---------------G~~i~~D~Vv~a~G~~p~~--~l 254 (431)
T 1q1r_A 192 PVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCED---------------GTRLPADLVIAGIGLIPNC--EL 254 (431)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETT---------------SCEEECSEEEECCCEEECC--HH
T ss_pred HHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCC---------------CCEEEcCEEEECCCCCcCc--ch
Confidence 56677888899999999999999999761 257787888865 4589999999999987654 35
Q ss_pred HhhcCCC
Q psy9486 147 SSRFNLR 153 (165)
Q Consensus 147 ~~~~gl~ 153 (165)
.+..|+.
T Consensus 255 ~~~~gl~ 261 (431)
T 1q1r_A 255 ASAAGLQ 261 (431)
T ss_dssp HHHTTCC
T ss_pred hhccCCC
Confidence 6667765
No 80
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=97.00 E-value=0.0008 Score=56.27 Aligned_cols=56 Identities=18% Similarity=0.097 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 67 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 67 ~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
..+.+.|++.+++.|++|+++++|++|..+ ++++ |.+ + |.++.||.||+|.|.+..
T Consensus 189 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~-~~~v--V~~-~---------------g~~~~ad~Vv~a~~~~~~ 244 (421)
T 3nrn_A 189 KAVIDELERIIMENKGKILTRKEVVEINIE-EKKV--YTR-D---------------NEEYSFDVAISNVGVRET 244 (421)
T ss_dssp HHHHHHHHHHHHTTTCEEESSCCEEEEETT-TTEE--EET-T---------------CCEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCeEEEEEEE-CCEE--EEe-C---------------CcEEEeCEEEECCCHHHH
Confidence 467788999999999999999999999875 5665 533 2 358999999999998753
No 81
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=96.99 E-value=0.0017 Score=54.57 Aligned_cols=68 Identities=18% Similarity=0.294 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccchHHH
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLTKSLS 147 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~~l~ 147 (165)
.+.+++.+..++.||+|++++.|+++.. ++++.+|.+.+ |.++.||.||+|+|..... .+.
T Consensus 186 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~~~~v~~~d---------------g~~i~aD~Vv~a~G~~p~~--~l~ 246 (410)
T 3ef6_A 186 RIGAWLRGLLTELGVQVELGTGVVGFSG--EGQLEQVMASD---------------GRSFVADSALICVGAEPAD--QLA 246 (410)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEEEC--SSSCCEEEETT---------------SCEEECSEEEECSCEEECC--HHH
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEec--cCcEEEEEECC---------------CCEEEcCEEEEeeCCeecH--HHH
Confidence 4567788888899999999999999865 34667888875 4689999999999998754 456
Q ss_pred hhcCCCC
Q psy9486 148 SRFNLRG 154 (165)
Q Consensus 148 ~~~gl~~ 154 (165)
+..|+..
T Consensus 247 ~~~gl~~ 253 (410)
T 3ef6_A 247 RQAGLAC 253 (410)
T ss_dssp HHTTCCB
T ss_pred HhCCCcc
Confidence 6677653
No 82
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.95 E-value=0.0036 Score=56.70 Aligned_cols=62 Identities=10% Similarity=0.127 Sum_probs=51.2
Q ss_pred cEEEE---hHHHHHHHHHHHHHCCCEEecCCceeEEEEcCC-CcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcc
Q psy9486 61 NYVVR---LGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGD-GSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAE 136 (165)
Q Consensus 61 ~~~i~---r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~-g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~ 136 (165)
+|... .+.+.+.|.+.+++.|++|++++.|.+|+++++ |+++||++.+ |.+|+|+.||.+.
T Consensus 369 g~~yp~GG~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~---------------Ge~i~A~~VVs~~ 433 (650)
T 1vg0_A 369 PFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQF---------------GQRIISKHFIIED 433 (650)
T ss_dssp SEEEETTCTTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETT---------------SCEEECSEEEEEG
T ss_pred ceEEeCCchhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCC---------------CCEEEcCEEEECh
Confidence 45555 568999999999999999999999999998633 8999998654 4689999999744
Q ss_pred c
Q psy9486 137 G 137 (165)
Q Consensus 137 G 137 (165)
.
T Consensus 434 ~ 434 (650)
T 1vg0_A 434 S 434 (650)
T ss_dssp G
T ss_pred h
Confidence 4
No 83
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=96.93 E-value=0.0035 Score=53.49 Aligned_cols=67 Identities=21% Similarity=0.227 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccchHHH
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLTKSLS 147 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~~l~ 147 (165)
.+.+.|.+.+++.||+|+++++|+++..+ ++++. |.+.+ |.++.||.||+|+|.+... .+.
T Consensus 203 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v~-v~~~~---------------g~~i~aD~Vv~a~G~~p~~--~l~ 263 (472)
T 3iwa_A 203 SLSQMLRHDLEKNDVVVHTGEKVVRLEGE-NGKVA-RVITD---------------KRTLDADLVILAAGVSPNT--QLA 263 (472)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEE-EEEES---------------SCEEECSEEEECSCEEECC--HHH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEcc-CCeEE-EEEeC---------------CCEEEcCEEEECCCCCcCH--HHH
Confidence 45677888889999999999999999874 56655 55554 3589999999999998754 355
Q ss_pred hhcCCC
Q psy9486 148 SRFNLR 153 (165)
Q Consensus 148 ~~~gl~ 153 (165)
+..|+.
T Consensus 264 ~~~gl~ 269 (472)
T 3iwa_A 264 RDAGLE 269 (472)
T ss_dssp HHHTCC
T ss_pred HhCCcc
Confidence 667765
No 84
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=96.91 E-value=0.0035 Score=55.13 Aligned_cols=64 Identities=17% Similarity=0.268 Sum_probs=53.8
Q ss_pred EEEEhHHHHHHHHHHHHHCCC--EEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCC
Q psy9486 62 YVVRLGHVVKWLGEQAEAMGV--EIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 139 (165)
Q Consensus 62 ~~i~r~~~d~~L~~~A~~~Gv--~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~ 139 (165)
...++.++.++|.+.+++.|+ +|+++++|+++.+++++..+.|.+.+ |.++.|+.||+|+|..
T Consensus 82 ~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~---------------G~~i~ad~lV~AtG~~ 146 (540)
T 3gwf_A 82 TYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDH---------------GEVYRAKYVVNAVGLL 146 (540)
T ss_dssp SEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETT---------------SCEEEEEEEEECCCSC
T ss_pred cCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcC---------------CCEEEeCEEEECCccc
Confidence 457899999999999999999 89999999999987554556677765 4579999999999975
Q ss_pred c
Q psy9486 140 G 140 (165)
Q Consensus 140 s 140 (165)
+
T Consensus 147 s 147 (540)
T 3gwf_A 147 S 147 (540)
T ss_dssp C
T ss_pred c
Confidence 5
No 85
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=96.82 E-value=0.0049 Score=50.19 Aligned_cols=63 Identities=19% Similarity=0.152 Sum_probs=50.9
Q ss_pred EEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 64 VRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 64 i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
+++..+.++|.+.+++.|++++.++.|+.+..++++. +-|.+.+ |.++.++.||+|+|..+..
T Consensus 71 ~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~-~~v~~~~---------------g~~~~~~~li~AtG~~~~~ 133 (360)
T 3ab1_A 71 VPAIDLVESLWAQAERYNPDVVLNETVTKYTKLDDGT-FETRTNT---------------GNVYRSRAVLIAAGLGAFE 133 (360)
T ss_dssp EEHHHHHHHHHHHHHTTCCEEECSCCEEEEEECTTSC-EEEEETT---------------SCEEEEEEEEECCTTCSCC
T ss_pred CCHHHHHHHHHHHHHHhCCEEEcCCEEEEEEECCCce-EEEEECC---------------CcEEEeeEEEEccCCCcCC
Confidence 6788999999999999999999999999998853333 3466654 3579999999999997644
No 86
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=96.79 E-value=0.0012 Score=57.45 Aligned_cols=62 Identities=19% Similarity=0.182 Sum_probs=45.2
Q ss_pred HHHHHHHHCC-CEEecCCceeEEEEcCCC-cEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 72 WLGEQAEAMG-VEIYPGIPASEVLYHGDG-SVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 72 ~L~~~A~~~G-v~i~~~~~v~~i~~~~~g-~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
.++..|++.| ++|++++.|++|++++++ +++||++.+ .+|... .-.+++|+.||+|+|+..+
T Consensus 226 ~~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~----~~g~~~----~~~~v~A~~VIlaaG~~~s 289 (504)
T 1n4w_A 226 TYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKD----TDGKLL----ATKEISCRYLFLGAGSLGS 289 (504)
T ss_dssp THHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEEC----TTCCEE----EEEEEEEEEEEECSHHHHH
T ss_pred HHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeC----CCCccc----eeEEEeeCEEEEccCCCCC
Confidence 3456677776 999999999999997434 899998863 233100 0147999999999998753
No 87
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=96.79 E-value=0.0031 Score=54.15 Aligned_cols=69 Identities=13% Similarity=0.120 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcC-eEEEcCEEEEcccCCcccchHH
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARG-MELHAKVTIFAEGCHGHLTKSL 146 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g-~~i~Ak~VI~A~G~~s~l~~~l 146 (165)
.+-+.|.+..++.||+|+++++|+++..+++++++.|.+.+ | .++.||.||+|+|..... .|
T Consensus 227 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~---------------G~~~i~~D~vv~a~G~~p~~--~l 289 (479)
T 2hqm_A 227 CIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMND---------------SKSIDDVDELIWTIGRKSHL--GM 289 (479)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETT---------------SCEEEEESEEEECSCEEECC--CS
T ss_pred HHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECC---------------CcEEEEcCEEEECCCCCCcc--cc
Confidence 45667788888899999999999999765345455677764 4 479999999999987755 33
Q ss_pred -HhhcCCC
Q psy9486 147 -SSRFNLR 153 (165)
Q Consensus 147 -~~~~gl~ 153 (165)
.+..|+.
T Consensus 290 ~l~~~gl~ 297 (479)
T 2hqm_A 290 GSENVGIK 297 (479)
T ss_dssp SGGGGTCC
T ss_pred ChhhcCce
Confidence 3446664
No 88
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=96.78 E-value=0.0054 Score=50.86 Aligned_cols=68 Identities=16% Similarity=0.095 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccchHH
Q psy9486 67 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLTKSL 146 (165)
Q Consensus 67 ~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~~l 146 (165)
..+.+.|.+..++.|++|+++++|+++..+ ++ .+.|.+.+ |.++.|+.||+|+|.++.. .+
T Consensus 187 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~-~~~v~~~~---------------g~~i~~d~vv~a~G~~p~~--~l 247 (384)
T 2v3a_A 187 PAAAKAVQAGLEGLGVRFHLGPVLASLKKA-GE-GLEAHLSD---------------GEVIPCDLVVSAVGLRPRT--EL 247 (384)
T ss_dssp HHHHHHHHHHHHTTTCEEEESCCEEEEEEE-TT-EEEEEETT---------------SCEEEESEEEECSCEEECC--HH
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEec-CC-EEEEEECC---------------CCEEECCEEEECcCCCcCH--HH
Confidence 345678888889999999999999999765 33 34566654 4579999999999998865 25
Q ss_pred HhhcCCC
Q psy9486 147 SSRFNLR 153 (165)
Q Consensus 147 ~~~~gl~ 153 (165)
.+..|+.
T Consensus 248 ~~~~g~~ 254 (384)
T 2v3a_A 248 AFAAGLA 254 (384)
T ss_dssp HHHTTCC
T ss_pred HHHCCCC
Confidence 6667775
No 89
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.68 E-value=0.0021 Score=55.92 Aligned_cols=71 Identities=21% Similarity=0.147 Sum_probs=48.8
Q ss_pred HHHHHHHHHCC-CEEecCCceeEEEEcCCC-cEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccchHHHh
Q psy9486 71 KWLGEQAEAMG-VEIYPGIPASEVLYHGDG-SVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLTKSLSS 148 (165)
Q Consensus 71 ~~L~~~A~~~G-v~i~~~~~v~~i~~~~~g-~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~~l~~ 148 (165)
..++..|++.| ++|++++.|++|++++++ +++||++.+ .+|... .-..++|+.||+|+|+..+ .++..
T Consensus 230 ~~~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~----~~g~~~----~~~~~~A~~VIlaaGa~~s--p~lL~ 299 (507)
T 1coy_A 230 KTYLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQID----EQGNVV----ATKVVTADRVFFAAGSVGT--SKLLV 299 (507)
T ss_dssp TTHHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEEC----TTSCEE----EEEEEEEEEEEECSHHHHH--HHHHH
T ss_pred HHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeC----CCCccc----ccEEEEeCEEEEccCccCC--HHHHH
Confidence 34456677765 999999999999997445 799998864 233100 0137999999999998753 34444
Q ss_pred hcC
Q psy9486 149 RFN 151 (165)
Q Consensus 149 ~~g 151 (165)
..|
T Consensus 300 ~Sg 302 (507)
T 1coy_A 300 SMK 302 (507)
T ss_dssp HHH
T ss_pred hcc
Confidence 333
No 90
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=96.58 E-value=0.0064 Score=52.52 Aligned_cols=67 Identities=21% Similarity=0.295 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccchHHH
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLTKSLS 147 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~~l~ 147 (165)
.+..++.+..++.||++++++.|+++..+ ++.+ .|.+.+ |.++.|+.||+|.|..... .+.
T Consensus 227 ~~~~~~~~~l~~~GV~v~~~~~V~~i~~~-~~~~-~v~l~d---------------G~~i~aD~Vv~a~G~~pn~--~l~ 287 (493)
T 1m6i_A 227 YLSNWTMEKVRREGVKVMPNAIVQSVGVS-SGKL-LIKLKD---------------GRKVETDHIVAAVGLEPNV--ELA 287 (493)
T ss_dssp HHHHHHHHHHHTTTCEEECSCCEEEEEEE-TTEE-EEEETT---------------SCEEEESEEEECCCEEECC--TTH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEec-CCeE-EEEECC---------------CCEEECCEEEECCCCCccH--HHH
Confidence 56778888889999999999999999764 4443 677764 4589999999999988754 245
Q ss_pred hhcCCC
Q psy9486 148 SRFNLR 153 (165)
Q Consensus 148 ~~~gl~ 153 (165)
+..|+.
T Consensus 288 ~~~gl~ 293 (493)
T 1m6i_A 288 KTGGLE 293 (493)
T ss_dssp HHHTCC
T ss_pred HHcCCc
Confidence 556764
No 91
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=96.57 E-value=0.0073 Score=48.94 Aligned_cols=59 Identities=17% Similarity=0.168 Sum_probs=47.3
Q ss_pred EEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 64 VRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 64 i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
+++..+.++|.+.+++.|++++.+++|.++..++ +.+ .|.+.+ + ++.++.||+|+|.++
T Consensus 85 ~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~-~~~-~v~~~~---------------g-~~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 85 ISGETYAEYLQVVANHYELNIFENTVVTNISADD-AYY-TIATTT---------------E-TYHADYIFVATGDYN 143 (369)
T ss_dssp CBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECS-SSE-EEEESS---------------C-CEEEEEEEECCCSTT
T ss_pred CCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECC-CeE-EEEeCC---------------C-EEEeCEEEECCCCCC
Confidence 5667888899999999999999999999998753 332 355543 2 589999999999875
No 92
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=96.54 E-value=0.0063 Score=53.60 Aligned_cols=63 Identities=16% Similarity=0.231 Sum_probs=52.2
Q ss_pred EEEhHHHHHHHHHHHHHCCC--EEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 63 VVRLGHVVKWLGEQAEAMGV--EIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 63 ~i~r~~~d~~L~~~A~~~Gv--~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
..++.++..+|.+.+++.|+ +++++++|+++.+++++..+.|.+.+ |.++.|+.||+|+|..+
T Consensus 95 ~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~---------------G~~i~ad~lV~AtG~~s 159 (549)
T 4ap3_A 95 YATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDR---------------GDEVSARFLVVAAGPLS 159 (549)
T ss_dssp SCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETT---------------CCEEEEEEEEECCCSEE
T ss_pred CCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECC---------------CCEEEeCEEEECcCCCC
Confidence 45788899999999999998 89999999999987555556677765 45799999999999643
No 93
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=96.52 E-value=0.003 Score=55.08 Aligned_cols=69 Identities=17% Similarity=0.167 Sum_probs=49.5
Q ss_pred HHHHHHHHH-CCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEE---EcCEEEEcccCCcccchHH
Q psy9486 71 KWLGEQAEA-MGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMEL---HAKVTIFAEGCHGHLTKSL 146 (165)
Q Consensus 71 ~~L~~~A~~-~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i---~Ak~VI~A~G~~s~l~~~l 146 (165)
..+.+.|++ .|++|++++.|++|+.+ +++++||++.+. .+|+. .++ .+|.||+|+|+.+ +.+|
T Consensus 199 ~~~l~~~~~~~~~~i~~~~~V~~i~~~-~~~~~gV~~~~~---~~g~~-------~~~~v~~~~~VIlaaG~~~--sp~l 265 (546)
T 1kdg_A 199 ATYLQTALARPNFTFKTNVMVSNVVRN-GSQILGVQTNDP---TLGPN-------GFIPVTPKGRVILSAGAFG--TSRI 265 (546)
T ss_dssp HTHHHHHHTCTTEEEECSCCEEEEEEE-TTEEEEEEESCT---TSSGG-------GEEEEEEEEEEEECSHHHH--HHHH
T ss_pred HHHHHHHhhCCCcEEEeCCEEEEEEEe-CCEEEEEEEEec---CCCce-------eEEEEEeCCEEEEcCChhc--CHHH
Confidence 345666665 69999999999999996 689999998751 13422 123 7899999999865 3455
Q ss_pred HhhcCC
Q psy9486 147 SSRFNL 152 (165)
Q Consensus 147 ~~~~gl 152 (165)
....|+
T Consensus 266 L~~sGi 271 (546)
T 1kdg_A 266 LFQSGI 271 (546)
T ss_dssp HHHTTB
T ss_pred HHHcCC
Confidence 555555
No 94
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=96.49 E-value=0.0077 Score=52.57 Aligned_cols=63 Identities=13% Similarity=0.180 Sum_probs=50.1
Q ss_pred EEEhHHHHHHHHHHHHHCC--CEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 63 VVRLGHVVKWLGEQAEAMG--VEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 63 ~i~r~~~d~~L~~~A~~~G--v~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
..++.++.++|...+++.+ ++++++++|.++.+++++..+.|.+.+ |.+++|+.||+|+|.++
T Consensus 90 ~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~---------------G~~~~ad~vV~AtG~~s 154 (542)
T 1w4x_A 90 YASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNH---------------GDRIRARYLIMASGQLS 154 (542)
T ss_dssp SCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETT---------------CCEEEEEEEEECCCSCC
T ss_pred cCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECC---------------CCEEEeCEEEECcCCCC
Confidence 3567888899988888876 789999999999986544445577754 35799999999999875
No 95
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=96.49 E-value=0.012 Score=47.12 Aligned_cols=61 Identities=25% Similarity=0.177 Sum_probs=48.9
Q ss_pred EEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 64 VRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 64 i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
+++..+..+|.+.+++.|++++.++.|..+..+ ++. +-|.+.+ |.++.++.||+|+|..+.
T Consensus 62 ~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~-~~~-~~v~~~~---------------g~~~~~~~lv~AtG~~~~ 122 (335)
T 2zbw_A 62 VYAKDLVKGLVEQVAPFNPVYSLGERAETLERE-GDL-FKVTTSQ---------------GNAYTAKAVIIAAGVGAF 122 (335)
T ss_dssp EEHHHHHHHHHHHHGGGCCEEEESCCEEEEEEE-TTE-EEEEETT---------------SCEEEEEEEEECCTTSEE
T ss_pred CCHHHHHHHHHHHHHHcCCEEEeCCEEEEEEEC-CCE-EEEEECC---------------CCEEEeCEEEECCCCCCC
Confidence 567889999999999999999999999999875 332 3355543 347999999999998653
No 96
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=96.46 E-value=0.0069 Score=52.21 Aligned_cols=69 Identities=22% Similarity=0.264 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccchHH-
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLTKSL- 146 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~~l- 146 (165)
.+.+.|.+.+++.||+|+++++|+++..++++ .+.|.+.+ |.++.||.||+|+|.+.... .|
T Consensus 232 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~-~~~v~~~~---------------G~~i~~D~vv~a~G~~p~~~-~L~ 294 (490)
T 1fec_A 232 ELRKQLTEQLRANGINVRTHENPAKVTKNADG-TRHVVFES---------------GAEADYDVVMLAIGRVPRSQ-TLQ 294 (490)
T ss_dssp HHHHHHHHHHHHTTEEEEETCCEEEEEECTTS-CEEEEETT---------------SCEEEESEEEECSCEEESCT-TSC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCC-EEEEEECC---------------CcEEEcCEEEEccCCCcCcc-ccC
Confidence 45667888889999999999999999875333 34677654 35799999999999887642 22
Q ss_pred HhhcCCC
Q psy9486 147 SSRFNLR 153 (165)
Q Consensus 147 ~~~~gl~ 153 (165)
.+..|+.
T Consensus 295 l~~~gl~ 301 (490)
T 1fec_A 295 LEKAGVE 301 (490)
T ss_dssp GGGGTCC
T ss_pred chhcCcc
Confidence 3446664
No 97
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.43 E-value=0.0015 Score=57.42 Aligned_cols=59 Identities=15% Similarity=0.252 Sum_probs=44.0
Q ss_pred HHHHHHH-HCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcC-EEEEcccCCc
Q psy9486 72 WLGEQAE-AMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAK-VTIFAEGCHG 140 (165)
Q Consensus 72 ~L~~~A~-~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak-~VI~A~G~~s 140 (165)
.++..|. +.|++|++++.|++|+++++++++||++.+. .+|+. ..++|+ .||+|+|+..
T Consensus 213 a~l~~a~~~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~---~~g~~-------~~i~A~k~VIlaaG~~~ 273 (546)
T 2jbv_A 213 SYIHPIVEQENFTLLTGLRARQLVFDADRRCTGVDIVDS---AFGHT-------HRLTARNEVVLSTGAID 273 (546)
T ss_dssp HHTGGGTTCTTEEEECSCEEEEEEECTTSBEEEEEEESS---TTSCE-------EEEEEEEEEEECSHHHH
T ss_pred HHHHHHhcCCCcEEEeCCEEEEEEECCCCeEEEEEEEEC---CCCcE-------EEEEeCccEEEecCccC
Confidence 3444454 5899999999999999963389999988641 11332 379997 9999999853
No 98
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=96.42 E-value=0.0096 Score=51.04 Aligned_cols=58 Identities=17% Similarity=0.228 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
.+.+.|.+.+++.||+|++++.|+++..+ ++.+ .|.+.+ |.++.||.||+|+|.....
T Consensus 233 ~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~-~~~v-~v~~~~---------------g~~i~aD~Vi~A~G~~p~~ 290 (484)
T 3o0h_A 233 DLRQLLNDAMVAKGISIIYEATVSQVQST-ENCY-NVVLTN---------------GQTICADRVMLATGRVPNT 290 (484)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEC-SSSE-EEEETT---------------SCEEEESEEEECCCEEECC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEee-CCEE-EEEECC---------------CcEEEcCEEEEeeCCCcCC
Confidence 45667888888999999999999999875 4554 677764 4589999999999987655
No 99
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=96.39 E-value=0.014 Score=46.35 Aligned_cols=60 Identities=20% Similarity=0.219 Sum_probs=49.1
Q ss_pred EEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 64 VRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 64 i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
+++..+..+|.+.+++.|++++++++|.++..++++. +.|.+.+ | ++.++.||+|+|.++
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~~v~~~~---------------g-~~~~d~vVlAtG~~~ 123 (332)
T 3lzw_A 64 IRAQELINNLKEQMAKFDQTICLEQAVESVEKQADGV-FKLVTNE---------------E-THYSKTVIITAGNGA 123 (332)
T ss_dssp EEHHHHHHHHHHHHTTSCCEEECSCCEEEEEECTTSC-EEEEESS---------------E-EEEEEEEEECCTTSC
T ss_pred CCHHHHHHHHHHHHHHhCCcEEccCEEEEEEECCCCc-EEEEECC---------------C-EEEeCEEEECCCCCc
Confidence 5788999999999999999999999999998863323 4466664 3 599999999999843
No 100
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=96.39 E-value=0.011 Score=51.08 Aligned_cols=69 Identities=19% Similarity=0.238 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccchHH-
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLTKSL- 146 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~~l- 146 (165)
.+-..|.+..++.||+|++++.|+++..+ ++.++.|.+.+ |.++.||.||+|+|..... ..|
T Consensus 236 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~~~~v~~~~---------------G~~i~~D~vv~a~G~~p~~-~~L~ 298 (495)
T 2wpf_A 236 TIREEVTKQLTANGIEIMTNENPAKVSLN-TDGSKHVTFES---------------GKTLDVDVVMMAIGRIPRT-NDLQ 298 (495)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEC-TTSCEEEEETT---------------SCEEEESEEEECSCEEECC-GGGT
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEc-CCceEEEEECC---------------CcEEEcCEEEECCCCcccc-cccc
Confidence 45667788888999999999999999775 33334677654 3579999999999988765 223
Q ss_pred HhhcCCC
Q psy9486 147 SSRFNLR 153 (165)
Q Consensus 147 ~~~~gl~ 153 (165)
.+..|+.
T Consensus 299 l~~~gl~ 305 (495)
T 2wpf_A 299 LGNVGVK 305 (495)
T ss_dssp GGGTTCC
T ss_pred hhhcCcc
Confidence 4456654
No 101
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=96.37 E-value=0.0081 Score=48.07 Aligned_cols=61 Identities=18% Similarity=0.222 Sum_probs=48.1
Q ss_pred EEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 63 VVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 63 ~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
.+.+..+..+|.+.+++.|++++.++ |.++..+ ++.+ -|.+ + +..++++.||+|+|.++..
T Consensus 66 ~~~~~~~~~~l~~~~~~~gv~~~~~~-v~~i~~~-~~~~-~v~~-~---------------~~~~~~~~vv~A~G~~~~~ 126 (333)
T 1vdc_A 66 GILGVELTDKFRKQSERFGTTIFTET-VTKVDFS-SKPF-KLFT-D---------------SKAILADAVILAIGAVAKR 126 (333)
T ss_dssp CEEHHHHHHHHHHHHHHTTCEEECCC-CCEEECS-SSSE-EEEC-S---------------SEEEEEEEEEECCCEEECC
T ss_pred CCCHHHHHHHHHHHHHHCCCEEEEeE-EEEEEEc-CCEE-EEEE-C---------------CcEEEcCEEEECCCCCcCC
Confidence 46788999999999999999999986 8888764 3332 3555 3 3589999999999988643
No 102
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=96.34 E-value=0.009 Score=47.31 Aligned_cols=63 Identities=21% Similarity=0.251 Sum_probs=48.8
Q ss_pred EEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCC-CcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 64 VRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGD-GSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 64 i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~-g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
.++..+.++|.+.+++.|++++.+++|..+..+.+ +....|.+.+ |.++.++.+|+|+|.++.
T Consensus 53 ~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~---------------g~~~~~~~lv~AtG~~~~ 116 (310)
T 1fl2_A 53 TEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETAS---------------GAVLKARSIIVATGAKWR 116 (310)
T ss_dssp EEHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETT---------------SCEEEEEEEEECCCEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECC---------------CCEEEeCEEEECcCCCcC
Confidence 46778899999999999999999999999965421 2234466654 347999999999998753
No 103
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=96.34 E-value=0.0047 Score=52.14 Aligned_cols=56 Identities=18% Similarity=0.143 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
.+.+.|++.+++.|++|+++++|++|..+ ++.++.|.+.+ .++.|+.||+|.+.+.
T Consensus 235 ~l~~~l~~~l~~~g~~i~~~~~V~~i~~~-~~~~~~v~~~~----------------~~~~ad~vv~a~p~~~ 290 (477)
T 3nks_A 235 MLPQALETHLTSRGVSVLRGQPVCGLSLQ-AEGRWKVSLRD----------------SSLEADHVISAIPASV 290 (477)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEEC-GGGCEEEECSS----------------CEEEESEEEECSCHHH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEEc-CCceEEEEECC----------------eEEEcCEEEECCCHHH
Confidence 68888999999999999999999999886 34434566542 4799999999998764
No 104
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=96.32 E-value=0.0087 Score=50.89 Aligned_cols=69 Identities=19% Similarity=0.182 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccchHH-
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLTKSL- 146 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~~l- 146 (165)
.+.++|.+..++.||+++++++|+++..++++. +.|.+.+ |.++.||.||+|+|..+... .|
T Consensus 209 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~-~~v~~~~---------------g~~i~~D~vv~a~G~~p~~~-~l~ 271 (450)
T 1ges_A 209 MISETLVEVMNAEGPQLHTNAIPKAVVKNTDGS-LTLELED---------------GRSETVDCLIWAIGREPAND-NIN 271 (450)
T ss_dssp HHHHHHHHHHHHHSCEEECSCCEEEEEECTTSC-EEEEETT---------------SCEEEESEEEECSCEEESCT-TSC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcE-EEEEECC---------------CcEEEcCEEEECCCCCcCCC-CCC
Confidence 466778888899999999999999998753333 4566654 35799999999999987652 22
Q ss_pred HhhcCCC
Q psy9486 147 SSRFNLR 153 (165)
Q Consensus 147 ~~~~gl~ 153 (165)
.+..|+.
T Consensus 272 ~~~~gl~ 278 (450)
T 1ges_A 272 LEAAGVK 278 (450)
T ss_dssp HHHHTCC
T ss_pred chhcCce
Confidence 3445654
No 105
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=96.31 E-value=0.017 Score=49.48 Aligned_cols=66 Identities=14% Similarity=0.221 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccchHHH
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLTKSLS 147 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~~l~ 147 (165)
.+.+.|.+.+++.||+|+++++|+++.. ++++.+|.+.+ .++.||.||+|+|..... .+.
T Consensus 228 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~--~~~v~~v~~~~----------------~~i~~D~vi~a~G~~p~~--~~l 287 (480)
T 3cgb_A 228 DMAEYIYKEADKHHIEILTNENVKAFKG--NERVEAVETDK----------------GTYKADLVLVSVGVKPNT--DFL 287 (480)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEE--SSBEEEEEETT----------------EEEECSEEEECSCEEESC--GGG
T ss_pred HHHHHHHHHHHHcCcEEEcCCEEEEEEc--CCcEEEEEECC----------------CEEEcCEEEECcCCCcCh--HHH
Confidence 5667788889999999999999999975 35676777653 479999999999988654 244
Q ss_pred hhcCCC
Q psy9486 148 SRFNLR 153 (165)
Q Consensus 148 ~~~gl~ 153 (165)
+..|+.
T Consensus 288 ~~~g~~ 293 (480)
T 3cgb_A 288 EGTNIR 293 (480)
T ss_dssp TTSCCC
T ss_pred HhCCcc
Confidence 556654
No 106
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=96.30 E-value=0.013 Score=49.73 Aligned_cols=57 Identities=18% Similarity=0.137 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
.+.+.+.+.+++.||+|++++.|+++..+ ++++ .|.+.+ + ++.||.||+|+|.....
T Consensus 190 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v-~v~~~~---------------g-~i~aD~Vv~A~G~~p~~ 246 (452)
T 3oc4_A 190 EMVAEVQKSLEKQAVIFHFEETVLGIEET-ANGI-VLETSE---------------Q-EISCDSGIFALNLHPQL 246 (452)
T ss_dssp HHHHHHHHHHHTTTEEEEETCCEEEEEEC-SSCE-EEEESS---------------C-EEEESEEEECSCCBCCC
T ss_pred HHHHHHHHHHHHcCCEEEeCCEEEEEEcc-CCeE-EEEECC---------------C-EEEeCEEEECcCCCCCh
Confidence 45567788888999999999999999864 5666 677754 3 89999999999987654
No 107
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=96.29 E-value=0.01 Score=50.35 Aligned_cols=58 Identities=21% Similarity=0.285 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
.+.+.|.+..++.||+|+++++|+++..+ ++++.+|.+ + |.++.||.||+|+|.....
T Consensus 192 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~~v~~v~~-~---------------g~~i~~D~vv~a~G~~p~~ 249 (452)
T 2cdu_A 192 EFTDILAKDYEAHGVNLVLGSKVAAFEEV-DDEIITKTL-D---------------GKEIKSDIAILCIGFRPNT 249 (452)
T ss_dssp HHHHHHHHHHHHTTCEEEESSCEEEEEEE-TTEEEEEET-T---------------SCEEEESEEEECCCEEECC
T ss_pred hHHHHHHHHHHHCCCEEEcCCeeEEEEcC-CCeEEEEEe-C---------------CCEEECCEEEECcCCCCCH
Confidence 45667888889999999999999999764 577766655 2 3589999999999988764
No 108
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=96.26 E-value=0.013 Score=46.45 Aligned_cols=62 Identities=24% Similarity=0.149 Sum_probs=48.6
Q ss_pred EEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 63 VVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 63 ~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
.+++..+.++|.+.+++.|++++. ++|.++..+ ++. +-|.+.+ |.++.++.||+|+|.++..
T Consensus 55 ~~~~~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~-~~~-~~v~~~~---------------g~~~~~~~vv~AtG~~~~~ 116 (311)
T 2q0l_A 55 VVSGLDFMQPWQEQCFRFGLKHEM-TAVQRVSKK-DSH-FVILAED---------------GKTFEAKSVIIATGGSPKR 116 (311)
T ss_dssp CBCHHHHHHHHHHHHHTTSCEEEC-SCEEEEEEE-TTE-EEEEETT---------------SCEEEEEEEEECCCEEECC
T ss_pred cCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEEc-CCE-EEEEEcC---------------CCEEECCEEEECCCCCCCC
Confidence 567889999999999999999998 789999875 343 2344443 3579999999999987644
No 109
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.25 E-value=0.0045 Score=55.19 Aligned_cols=62 Identities=19% Similarity=0.312 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEcC---CCcEEEEEEccccccCCCCCCCCCCcCeEEEcC-EEEEcccCCc
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYHG---DGSVKGIATGDVGIAKDGSPKDTFARGMELHAK-VTIFAEGCHG 140 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~---~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak-~VI~A~G~~s 140 (165)
....+|...+++.+++|++++.|++|+++. +++++||+..+ .+|.. .+++|+ -||+|+|+-.
T Consensus 228 aa~ayL~p~~~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~----~~G~~-------~~v~A~kEVILsAGa~~ 293 (583)
T 3qvp_A 228 AAREWLLPNYQRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGT----HKGNT-------HNVYAKHEVLLAAGSAV 293 (583)
T ss_dssp HHHHHTTTTTTCTTEEEECSCEEEEEEEECSSSSCEEEEEEEES----STTCE-------EEEEEEEEEEECSCTTT
T ss_pred HHHHHHHHhhcCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEe----cCCcE-------EEEEECCEEEEeCCccC
Confidence 455566555566899999999999999973 57999999874 24433 368895 6999999775
No 110
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=96.25 E-value=0.014 Score=49.56 Aligned_cols=68 Identities=18% Similarity=0.089 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccchHHH
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLTKSLS 147 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~~l~ 147 (165)
.+.+.|.+.+++.||+|+++++|+++..+ +..+.|.+.+ .++.||.||+|+|.+........
T Consensus 217 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~~~~v~~~~----------------~~i~aD~Vv~a~G~~p~~~~l~l 278 (467)
T 1zk7_A 217 AIGEAVTAAFRAEGIEVLEHTQASQVAHM--DGEFVLTTTH----------------GELRADKLLVATGRTPNTRSLAL 278 (467)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEEE--TTEEEEEETT----------------EEEEESEEEECSCEEESCTTSCG
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEe--CCEEEEEECC----------------cEEEcCEEEECCCCCcCCCcCCc
Confidence 46677888889999999999999999764 3344566643 47999999999999876421112
Q ss_pred hhcCCC
Q psy9486 148 SRFNLR 153 (165)
Q Consensus 148 ~~~gl~ 153 (165)
+..|+.
T Consensus 279 ~~~gl~ 284 (467)
T 1zk7_A 279 DAAGVT 284 (467)
T ss_dssp GGGTCC
T ss_pred hhcCCc
Confidence 345554
No 111
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=96.25 E-value=0.0017 Score=56.99 Aligned_cols=66 Identities=15% Similarity=0.241 Sum_probs=47.0
Q ss_pred HHHHHHHCCCEEecCCceeEEEEcCC--CcEEEEEEccccccCCCCCCCCCCcCeEE---EcCEEEEcccCCcccchHHH
Q psy9486 73 LGEQAEAMGVEIYPGIPASEVLYHGD--GSVKGIATGDVGIAKDGSPKDTFARGMEL---HAKVTIFAEGCHGHLTKSLS 147 (165)
Q Consensus 73 L~~~A~~~Gv~i~~~~~v~~i~~~~~--g~V~GV~~~~~g~~~~g~~~~~~~~g~~i---~Ak~VI~A~G~~s~l~~~l~ 147 (165)
|...|++.|++|++++.|++|+++++ ++++||+..+ .+|+. ..+ .++.||+|+|+.. +.+|.
T Consensus 200 ~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~----~~g~~-------~~~~v~a~k~VILaaGa~~--sp~lL 266 (536)
T 1ju2_A 200 LLNKGNSNNLRVGVHASVEKIIFSNAPGLTATGVIYRD----SNGTP-------HQAFVRSKGEVIVSAGTIG--TPQLL 266 (536)
T ss_dssp GGGGSCTTTEEEEESCEEEEEEECCSSSCBEEEEEEEC----TTSCE-------EEEEEEEEEEEEECCHHHH--HHHHH
T ss_pred hhhhhcCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEe----CCCce-------EEEEeccCCEEEEcCcccC--CHHHH
Confidence 44556788999999999999999742 4899998864 23422 145 5699999999875 34444
Q ss_pred hhcC
Q psy9486 148 SRFN 151 (165)
Q Consensus 148 ~~~g 151 (165)
...|
T Consensus 267 ~~SG 270 (536)
T 1ju2_A 267 LLSG 270 (536)
T ss_dssp HHTT
T ss_pred HHcC
Confidence 4444
No 112
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=96.24 E-value=0.01 Score=47.30 Aligned_cols=70 Identities=10% Similarity=0.091 Sum_probs=50.7
Q ss_pred HHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccchHHHhhc
Q psy9486 71 KWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLTKSLSSRF 150 (165)
Q Consensus 71 ~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~~l~~~~ 150 (165)
..+.+++++.||+++++++|+++..+ ++++.+|.+.+. .+|+. .++.+|.||+|+|..... .+.+.+
T Consensus 194 ~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~---~~g~~-------~~i~~D~vi~a~G~~p~~--~~l~~~ 260 (319)
T 3cty_A 194 NAYVQEIKKRNIPYIMNAQVTEIVGD-GKKVTGVKYKDR---TTGEE-------KLIETDGVFIYVGLIPQT--SFLKDS 260 (319)
T ss_dssp HHHHHHHHHTTCCEECSEEEEEEEES-SSSEEEEEEEET---TTCCE-------EEECCSEEEECCCEEECC--GGGTTS
T ss_pred HHHHHHHhcCCcEEEcCCeEEEEecC-CceEEEEEEEEc---CCCce-------EEEecCEEEEeeCCccCh--HHHhhc
Confidence 45677888999999999999999875 566888877531 12321 369999999999987643 344456
Q ss_pred CCC
Q psy9486 151 NLR 153 (165)
Q Consensus 151 gl~ 153 (165)
|+.
T Consensus 261 gl~ 263 (319)
T 3cty_A 261 GVK 263 (319)
T ss_dssp CCC
T ss_pred ccc
Confidence 654
No 113
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=96.19 E-value=0.011 Score=51.98 Aligned_cols=64 Identities=13% Similarity=0.157 Sum_probs=52.7
Q ss_pred EEEEhHHHHHHHHHHHHHCCC--EEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCC
Q psy9486 62 YVVRLGHVVKWLGEQAEAMGV--EIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 139 (165)
Q Consensus 62 ~~i~r~~~d~~L~~~A~~~Gv--~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~ 139 (165)
...++.++..+|.+.+++.|+ .+.+++.|+++.+++++..+.|.+.+ |.++.|+.||+|+|..
T Consensus 82 ~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~---------------G~~~~ad~lV~AtG~~ 146 (545)
T 3uox_A 82 NFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDN---------------EEVVTCRFLISATGPL 146 (545)
T ss_dssp SSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETT---------------TEEEEEEEEEECCCSC
T ss_pred cCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECC---------------CCEEEeCEEEECcCCC
Confidence 346788999999999999998 89999999999986554556677765 4689999999999965
Q ss_pred c
Q psy9486 140 G 140 (165)
Q Consensus 140 s 140 (165)
+
T Consensus 147 s 147 (545)
T 3uox_A 147 S 147 (545)
T ss_dssp B
T ss_pred C
Confidence 4
No 114
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=96.18 E-value=0.013 Score=50.20 Aligned_cols=68 Identities=12% Similarity=0.109 Sum_probs=49.8
Q ss_pred EEEhHHHHHHHHHHHHHCCCE--EecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 63 VVRLGHVVKWLGEQAEAMGVE--IYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 63 ~i~r~~~d~~L~~~A~~~Gv~--i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
.+++..+.++|.+.+++.|++ |+++++|+++..++++..+.|.+.+. .+|+ ..++.+|.||+|+|.++
T Consensus 97 ~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~---~~g~-------~~~~~~d~VVvAtG~~s 166 (464)
T 2xve_A 97 YPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDH---TTDT-------IYSEEFDYVVCCTGHFS 166 (464)
T ss_dssp SCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEET---TTTE-------EEEEEESEEEECCCSSS
T ss_pred CCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEc---CCCc-------eEEEEcCEEEECCCCCC
Confidence 357889999999999999998 99999999998764322344555430 1121 14689999999999654
No 115
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=96.12 E-value=0.013 Score=49.87 Aligned_cols=76 Identities=18% Similarity=0.174 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccchHHH
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLTKSLS 147 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~~l~ 147 (165)
.+.++|.+..++.||+|+++++|+++..++++..+.|.+.+. .+| .+.++.+|.||+|+|.......-+.
T Consensus 225 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~---~~g-------~~~~~~~D~vv~a~G~~p~~~~l~l 294 (478)
T 1v59_A 225 EVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDT---KTN-------KQENLEAEVLLVAVGRRPYIAGLGA 294 (478)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEET---TTT-------EEEEEEESEEEECSCEEECCTTSCT
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEc---CCC-------CceEEECCEEEECCCCCcCCCCCCc
Confidence 466778888899999999999999997621344455665420 011 1357999999999998876532233
Q ss_pred hhcCCC
Q psy9486 148 SRFNLR 153 (165)
Q Consensus 148 ~~~gl~ 153 (165)
+..|+.
T Consensus 295 ~~~g~~ 300 (478)
T 1v59_A 295 EKIGLE 300 (478)
T ss_dssp TTTTCC
T ss_pred hhcCce
Confidence 445554
No 116
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=96.11 E-value=0.017 Score=49.66 Aligned_cols=58 Identities=17% Similarity=0.216 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
.+.+.|.+.+++.||+|+++++|+++..+ ++.+ .|.+.+ |.++.||.||+|+|.+...
T Consensus 224 ~~~~~l~~~l~~~GV~i~~~~~V~~i~~~-~~~v-~v~~~~---------------g~~i~aD~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 224 DAALVLEESFAERGVRLFKNARAASVTRT-GAGV-LVTMTD---------------GRTVEGSHALMTIGSVPNT 281 (499)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEEC-SSSE-EEEETT---------------SCEEEESEEEECCCEEECC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEe-CCEE-EEEECC---------------CcEEEcCEEEECCCCCcCC
Confidence 45677888889999999999999999875 3443 455543 3579999999999988754
No 117
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=96.10 E-value=0.017 Score=46.94 Aligned_cols=71 Identities=14% Similarity=0.238 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccchHHHh
Q psy9486 69 VVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLTKSLSS 148 (165)
Q Consensus 69 ~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~~l~~ 148 (165)
+-+.|.+..++.||++++++.|.++..+ ++++.+|.+.. .+|+. .++.+|.||+|+|..... .+.+
T Consensus 204 ~~~~l~~~~~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~----~~g~~-------~~i~~D~vi~a~G~~p~~--~~l~ 269 (360)
T 3ab1_A 204 TAHEVERARANGTIDVYLETEVASIEES-NGVLTRVHLRS----SDGSK-------WTVEADRLLILIGFKSNL--GPLA 269 (360)
T ss_dssp HHHSSHHHHHHTSEEEESSEEEEEEEEE-TTEEEEEEEEE----TTCCE-------EEEECSEEEECCCBCCSC--GGGG
T ss_pred HHHHHHHHhhcCceEEEcCcCHHHhccC-CCceEEEEEEe----cCCCe-------EEEeCCEEEECCCCCCCH--HHHH
Confidence 4556777888899999999999999875 57777887752 13321 479999999999977643 3445
Q ss_pred hcCCC
Q psy9486 149 RFNLR 153 (165)
Q Consensus 149 ~~gl~ 153 (165)
.+++.
T Consensus 270 ~~~~~ 274 (360)
T 3ab1_A 270 RWDLE 274 (360)
T ss_dssp GSSCC
T ss_pred hhccc
Confidence 56654
No 118
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.09 E-value=0.0022 Score=57.02 Aligned_cols=60 Identities=20% Similarity=0.343 Sum_probs=45.2
Q ss_pred HHHHHHHHHHCCCEEecCCceeEEEEcCC---CcEEEEEEccccccCCCCCCCCCCcCeEEEc-CEEEEcccCCc
Q psy9486 70 VKWLGEQAEAMGVEIYPGIPASEVLYHGD---GSVKGIATGDVGIAKDGSPKDTFARGMELHA-KVTIFAEGCHG 140 (165)
Q Consensus 70 d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~---g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~A-k~VI~A~G~~s 140 (165)
..+|...+++.|++|++++.|++|+++++ ++++||+..+ .+|+. ..++| |.||+|+|+-.
T Consensus 234 ~~~l~~~~~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~----~~g~~-------~~v~A~k~VILaaG~~~ 297 (587)
T 1gpe_A 234 RAWLLPNYQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGT----NKAVN-------FDVFAKHEVLLAAGSAI 297 (587)
T ss_dssp HHHTTTTTTCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEE----ETTEE-------EEEEEEEEEEECSCTTT
T ss_pred HHHHHHhhcCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEe----CCCcE-------EEEEecccEEEccCCCC
Confidence 34544455568999999999999999642 5899998873 23432 36899 99999999865
No 119
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=96.06 E-value=0.014 Score=49.63 Aligned_cols=58 Identities=19% Similarity=0.149 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEE-EccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIA-TGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~-~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
.+.+.|.+.+++.||+|++++.|+++..++++ ++.|. +.+ |. +.||.||+|+|.+...
T Consensus 212 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~-~~~v~~~~~---------------g~-i~aD~Vv~a~G~~p~~ 270 (463)
T 4dna_A 212 DMRRGLHAAMEEKGIRILCEDIIQSVSADADG-RRVATTMKH---------------GE-IVADQVMLALGRMPNT 270 (463)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECTTS-CEEEEESSS---------------CE-EEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHHCCCEEECCCEEEEEEEcCCC-EEEEEEcCC---------------Ce-EEeCEEEEeeCcccCC
Confidence 45677888899999999999999999875334 34677 654 44 9999999999987654
No 120
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=96.03 E-value=0.026 Score=44.67 Aligned_cols=64 Identities=17% Similarity=0.130 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCC-CCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKD-GSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~-g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
.+.+.|.+.+++.||+|+++++|+++..+ ++++.+|.+.+. .+ |+ ..++.+|.||+|+|.....
T Consensus 185 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~---~~~g~-------~~~i~~D~vv~a~G~~p~~ 249 (320)
T 1trb_A 185 ILIKRLMDKVENGNIILHTNRTLEEVTGD-QMGVTGVRLRDT---QNSDN-------IESLDVAGLFVAIGHSPNT 249 (320)
T ss_dssp HHHHHHHHHHHTSSEEEECSCEEEEEEEC-SSSEEEEEEECC---TTCCC-------CEEEECSEEEECSCEEESC
T ss_pred HHHHHHHHhcccCCeEEEcCceeEEEEcC-CCceEEEEEEec---cCCCc-------eEEEEcCEEEEEeCCCCCh
Confidence 45556777788899999999999999875 568888887641 11 32 2479999999999977643
No 121
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=95.99 E-value=0.025 Score=47.45 Aligned_cols=63 Identities=16% Similarity=0.257 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccchHHH
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLTKSLS 147 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~~l~ 147 (165)
.+..++.+..++.||+|++++.|+++. + + +|.+.+ |.++.||.||+|+|..... .+.
T Consensus 188 ~~~~~l~~~l~~~GV~i~~~~~v~~i~-~--~---~v~~~~---------------g~~i~~D~vi~a~G~~p~~--~l~ 244 (408)
T 2gqw_A 188 TLADFVARYHAAQGVDLRFERSVTGSV-D--G---VVLLDD---------------GTRIAADMVVVGIGVLAND--ALA 244 (408)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEE-T--T---EEEETT---------------SCEEECSEEEECSCEEECC--HHH
T ss_pred HHHHHHHHHHHHcCcEEEeCCEEEEEE-C--C---EEEECC---------------CCEEEcCEEEECcCCCccH--HHH
Confidence 456778888899999999999999997 3 3 566654 4589999999999988654 355
Q ss_pred hhcCCC
Q psy9486 148 SRFNLR 153 (165)
Q Consensus 148 ~~~gl~ 153 (165)
+..|+.
T Consensus 245 ~~~gl~ 250 (408)
T 2gqw_A 245 RAAGLA 250 (408)
T ss_dssp HHHTCC
T ss_pred HhCCCC
Confidence 667764
No 122
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=95.97 E-value=0.02 Score=48.46 Aligned_cols=59 Identities=17% Similarity=0.146 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 67 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 67 ~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
..+.+.|.+.+++.||+++++++|+++..+ ++. +.|.+.+ |.++.+|.||+|+|.++..
T Consensus 208 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~-~~~-v~v~~~~---------------g~~i~~D~vv~A~G~~p~~ 266 (455)
T 2yqu_A 208 LEVSRAAERVFKKQGLTIRTGVRVTAVVPE-AKG-ARVELEG---------------GEVLEADRVLVAVGRRPYT 266 (455)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEEE-TTE-EEEEETT---------------SCEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEEe-CCE-EEEEECC---------------CeEEEcCEEEECcCCCcCC
Confidence 456777888889999999999999999875 333 3455543 3579999999999998765
No 123
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=95.93 E-value=0.02 Score=48.90 Aligned_cols=68 Identities=16% Similarity=0.138 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCe-EEEcCEEEEcccCCcccchHH
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGM-ELHAKVTIFAEGCHGHLTKSL 146 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~-~i~Ak~VI~A~G~~s~l~~~l 146 (165)
.+.+.|.+..++.||+++++++|+++..++ +. +.|.+.+ |. ++.+|.||+|+|...... .|
T Consensus 208 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~-~~v~~~~---------------G~~~i~~D~vv~a~G~~p~~~-~l 269 (463)
T 2r9z_A 208 LLSATLAENMHAQGIETHLEFAVAALERDA-QG-TTLVAQD---------------GTRLEGFDSVIWAVGRAPNTR-DL 269 (463)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEEEET-TE-EEEEETT---------------CCEEEEESEEEECSCEEESCT-TS
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEeC-Ce-EEEEEeC---------------CcEEEEcCEEEECCCCCcCCC-CC
Confidence 455677888899999999999999997653 33 4566654 45 799999999999887652 22
Q ss_pred -HhhcCCC
Q psy9486 147 -SSRFNLR 153 (165)
Q Consensus 147 -~~~~gl~ 153 (165)
.+..|+.
T Consensus 270 ~~~~~g~~ 277 (463)
T 2r9z_A 270 GLEAAGIE 277 (463)
T ss_dssp CHHHHTCC
T ss_pred CchhcCCc
Confidence 3445553
No 124
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=95.92 E-value=0.021 Score=44.89 Aligned_cols=60 Identities=13% Similarity=0.145 Sum_probs=48.1
Q ss_pred EEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 64 VRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 64 i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
++...+..+|.+.+++.|++++. +.|.++..+ ++. +-|.+.+ |.++.++.||+|+|....
T Consensus 67 ~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~-~~~-~~v~~~~---------------g~~~~~d~lvlAtG~~~~ 126 (323)
T 3f8d_A 67 IQASDMIKVFNKHIEKYEVPVLL-DIVEKIENR-GDE-FVVKTKR---------------KGEFKADSVILGIGVKRR 126 (323)
T ss_dssp EEHHHHHHHHHHHHHTTTCCEEE-SCEEEEEEC---C-EEEEESS---------------SCEEEEEEEEECCCCEEC
T ss_pred CCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEec-CCE-EEEEECC---------------CCEEEcCEEEECcCCCCc
Confidence 77889999999999999999999 899999875 333 3466654 358999999999998743
No 125
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=95.87 E-value=0.022 Score=48.47 Aligned_cols=57 Identities=19% Similarity=0.242 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHCC-CEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 67 GHVVKWLGEQAEAMG-VEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 67 ~~~d~~L~~~A~~~G-v~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
..+.+.|.+.+++.| ++|+++++|++|..+ ++.| .|.+.+ |..++||.||+|.|...
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~-~~~v-~v~~~~---------------g~~~~ad~vI~a~~~~~ 312 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVNE-RDAA-RVTARD---------------GREFVAKRVVCTIPLNV 312 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEEC-SSSE-EEEETT---------------CCEEEEEEEEECCCGGG
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEEc-CCEE-EEEECC---------------CCEEEcCEEEECCCHHH
Confidence 367778888888899 999999999999885 4443 466654 34799999999999754
No 126
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=95.77 E-value=0.014 Score=50.45 Aligned_cols=60 Identities=15% Similarity=0.172 Sum_probs=47.2
Q ss_pred HHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccchHHHhhcCCC
Q psy9486 75 EQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLTKSLSSRFNLR 153 (165)
Q Consensus 75 ~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~~l~~~~gl~ 153 (165)
+++++.||+|++++.|.++.- ++++.+|.+.+ |.++.||.||+|.|.+... .+.+.+|+.
T Consensus 265 ~~l~~~GV~v~~~~~v~~i~~--~~~v~~v~~~~---------------g~~i~aD~Vv~a~G~~p~~--~l~~~~g~~ 324 (493)
T 1y56_A 265 QELERWGIDYVHIPNVKRVEG--NEKVERVIDMN---------------NHEYKVDALIFADGRRPDI--NPITQAGGK 324 (493)
T ss_dssp HHHHHHTCEEEECSSEEEEEC--SSSCCEEEETT---------------CCEEECSEEEECCCEEECC--HHHHHTTCC
T ss_pred HHHHhCCcEEEeCCeeEEEec--CCceEEEEeCC---------------CeEEEeCEEEECCCcCcCc--hHHHhcCCC
Confidence 667889999999999999964 35566777654 3589999999999998754 456667764
No 127
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.76 E-value=0.032 Score=48.10 Aligned_cols=59 Identities=19% Similarity=0.165 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeE-EEcCEEEEcccCCccc
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGME-LHAKVTIFAEGCHGHL 142 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~-i~Ak~VI~A~G~~s~l 142 (165)
.+...+.+..++.||+++++++|+++..++++. +.|.+.+ |.+ +.+|.||+|+|.....
T Consensus 218 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~-~~v~~~~---------------g~~~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 218 SVINVLENDMKKNNINIVTFADVVEIKKVSDKN-LSIHLSD---------------GRIYEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEESSTTC-EEEEETT---------------SCEEEEESEEEECCCBCCTT
T ss_pred hhHHHHHHHHHhCCCEEEECCEEEEEEEcCCce-EEEEECC---------------CcEEEECCEEEECCCCCcCC
Confidence 556677888899999999999999997643343 4566654 345 9999999999988754
No 128
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=95.74 E-value=0.02 Score=45.77 Aligned_cols=63 Identities=19% Similarity=0.144 Sum_probs=46.6
Q ss_pred EEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcC-CCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 63 VVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHG-DGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 63 ~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~-~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
.+++..+.++|.+.+++.|++++. .+|.++..++ ++..+.|.+.+ |.++.++.||+|+|.++.
T Consensus 61 ~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~~~~~~v~~~~---------------g~~~~~~~vv~AtG~~~~ 124 (325)
T 2q7v_A 61 PIAGMELAQRMHQQAEKFGAKVEM-DEVQGVQHDATSHPYPFTVRGY---------------NGEYRAKAVILATGADPR 124 (325)
T ss_dssp CBCHHHHHHHHHHHHHHTTCEEEE-CCEEEEEECTTSSSCCEEEEES---------------SCEEEEEEEEECCCEEEC
T ss_pred CCCHHHHHHHHHHHHHHcCCEEEe-eeEEEEEeccCCCceEEEEECC---------------CCEEEeCEEEECcCCCcC
Confidence 356788999999999999999987 5899887741 12112344433 357999999999998753
No 129
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=95.74 E-value=0.01 Score=50.15 Aligned_cols=69 Identities=12% Similarity=0.071 Sum_probs=50.4
Q ss_pred EEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcC-CCcEE--EEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCC
Q psy9486 63 VVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHG-DGSVK--GIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 139 (165)
Q Consensus 63 ~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~-~g~V~--GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~ 139 (165)
...|..+.++|...+++.|++++++++|+++..++ ++++. -|.+.+ .+|+. .++.|+.||+|+|..
T Consensus 123 ~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~----g~g~~-------~~~~~d~lVlAtG~~ 191 (463)
T 3s5w_A 123 YPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRN----ADGEE-------LVRTTRALVVSPGGT 191 (463)
T ss_dssp CCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEE----TTSCE-------EEEEESEEEECCCCE
T ss_pred CCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEec----CCCce-------EEEEeCEEEECCCCC
Confidence 45788999999999999999999999999997742 24443 344443 11211 279999999999986
Q ss_pred ccc
Q psy9486 140 GHL 142 (165)
Q Consensus 140 s~l 142 (165)
..+
T Consensus 192 p~~ 194 (463)
T 3s5w_A 192 PRI 194 (463)
T ss_dssp ECC
T ss_pred CCC
Confidence 544
No 130
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=95.64 E-value=0.0021 Score=52.24 Aligned_cols=51 Identities=16% Similarity=0.255 Sum_probs=42.2
Q ss_pred cEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 61 NYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 61 ~~~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
++.++...+.++|.+.|++.|++|++ ++|+++..+ . .++|+.||+|+|+++
T Consensus 136 ~~~v~p~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~-----------~-----------------~~~a~~VV~A~G~~s 186 (351)
T 3g3e_A 136 SLILEGKNYLQWLTERLTERGVKFFQ-RKVESFEEV-----------A-----------------REGADVIVNCTGVWA 186 (351)
T ss_dssp EEEECHHHHHHHHHHHHHHTTCEEEE-CCCCCHHHH-----------H-----------------HTTCSEEEECCGGGG
T ss_pred ceEEcHHHHHHHHHHHHHHCCCEEEE-EEeCCHHHh-----------h-----------------cCCCCEEEECCCcCh
Confidence 46788899999999999999999998 888776321 1 267899999999997
No 131
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=95.63 E-value=0.045 Score=47.44 Aligned_cols=69 Identities=22% Similarity=0.323 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEc------------------CCCcEEEEEEccccccCCCCCCCCCCcCeEEE
Q psy9486 67 GHVVKWLGEQAEAMGVEIYPGIPASEVLYH------------------GDGSVKGIATGDVGIAKDGSPKDTFARGMELH 128 (165)
Q Consensus 67 ~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~------------------~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~ 128 (165)
..+..++.+.+++.||++++++.|+++..+ +++++. +.+.+ |.++.
T Consensus 192 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~---------------g~~i~ 255 (565)
T 3ntd_A 192 REMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLS-LTLSN---------------GELLE 255 (565)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEE-EEETT---------------SCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEE-EEEcC---------------CCEEE
Confidence 356677888889999999999999999763 234433 44433 35899
Q ss_pred cCEEEEcccCCcccchHHHhhcCCC
Q psy9486 129 AKVTIFAEGCHGHLTKSLSSRFNLR 153 (165)
Q Consensus 129 Ak~VI~A~G~~s~l~~~l~~~~gl~ 153 (165)
||.||+|+|..... .+.+..|+.
T Consensus 256 ~D~vi~a~G~~p~~--~l~~~~g~~ 278 (565)
T 3ntd_A 256 TDLLIMAIGVRPET--QLARDAGLA 278 (565)
T ss_dssp ESEEEECSCEEECC--HHHHHHTCC
T ss_pred cCEEEECcCCccch--HHHHhCCcc
Confidence 99999999998765 355666764
No 132
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=95.61 E-value=0.0035 Score=51.23 Aligned_cols=50 Identities=12% Similarity=0.161 Sum_probs=41.9
Q ss_pred cEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 61 NYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 61 ~~~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
++.++...+.++|.+.|++.|++|+. ++|+++.. + . + +|+.||+|+|.++
T Consensus 136 ~~~v~p~~~~~~l~~~~~~~G~~i~~-~~v~~l~~--~---------~-----------------~-~a~~VV~A~G~~s 185 (363)
T 1c0p_A 136 TLSVHAPKYCQYLARELQKLGATFER-RTVTSLEQ--A---------F-----------------D-GADLVVNATGLGA 185 (363)
T ss_dssp EEECCHHHHHHHHHHHHHHTTCEEEE-CCCSBGGG--T---------C-----------------S-SCSEEEECCGGGG
T ss_pred cceecHHHHHHHHHHHHHHCCCEEEE-EEcccHhh--c---------C-----------------c-CCCEEEECCCcch
Confidence 46788999999999999999999998 88887732 1 1 1 6899999999997
No 133
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=95.53 E-value=0.052 Score=43.28 Aligned_cols=72 Identities=17% Similarity=0.106 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccchHHH
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLTKSLS 147 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~~l~ 147 (165)
.+-++|.+..++.||++++++.+.++.. ++++.+|.+... .+|+ ..++.+|.||.|+|..... .+.
T Consensus 192 ~~~~~l~~~l~~~gv~v~~~~~v~~i~~--~~~~~~v~~~~~---~~g~-------~~~i~~D~vi~a~G~~p~~--~~l 257 (335)
T 2zbw_A 192 ASVKELMKAHEEGRLEVLTPYELRRVEG--DERVRWAVVFHN---QTQE-------ELALEVDAVLILAGYITKL--GPL 257 (335)
T ss_dssp HHHHHHHHHHHTTSSEEETTEEEEEEEE--SSSEEEEEEEET---TTCC-------EEEEECSEEEECCCEEEEC--GGG
T ss_pred HHHHHHHhccccCCeEEecCCcceeEcc--CCCeeEEEEEEC---CCCc-------eEEEecCEEEEeecCCCCc--hHh
Confidence 4556777777888999999999999976 366777777520 1232 1479999999999988754 244
Q ss_pred hhcCCC
Q psy9486 148 SRFNLR 153 (165)
Q Consensus 148 ~~~gl~ 153 (165)
+.+++.
T Consensus 258 ~~~~~~ 263 (335)
T 2zbw_A 258 ANWGLA 263 (335)
T ss_dssp GGSCCC
T ss_pred hhccee
Confidence 556654
No 134
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=95.50 E-value=0.021 Score=49.61 Aligned_cols=62 Identities=21% Similarity=0.262 Sum_probs=48.5
Q ss_pred EEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCC-CcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 64 VRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGD-GSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 64 i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~-g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
..+..+..+|.+.+++.|++++.+++|..+..+.+ +....|.+.+ |..+.++.||+|+|++.
T Consensus 264 ~~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~---------------g~~~~~d~vVlAtG~~~ 326 (521)
T 1hyu_A 264 TEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETAS---------------GAVLKARSIIIATGAKW 326 (521)
T ss_dssp BCHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETT---------------SCEEEEEEEEECCCEEE
T ss_pred CCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECC---------------CCEEEcCEEEECCCCCc
Confidence 46778899999999999999999999999975321 2234466654 35899999999999865
No 135
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=95.38 E-value=0.0079 Score=53.39 Aligned_cols=61 Identities=8% Similarity=0.219 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEc---CC-CcEEEEEEccccccCCC-CCCCCCCcCeEEEc-CEEEEcccCC
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYH---GD-GSVKGIATGDVGIAKDG-SPKDTFARGMELHA-KVTIFAEGCH 139 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~---~~-g~V~GV~~~~~g~~~~g-~~~~~~~~g~~i~A-k~VI~A~G~~ 139 (165)
....+|.....+.+++|++++.|++|+++ ++ ++++||+..+ .+| .. ..++| |-||+|+|+-
T Consensus 209 a~~ayL~p~~~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~----~~g~~~-------~~v~A~kEVILsAGai 275 (566)
T 3fim_B 209 SSTAYLRPAQSRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAE----QEGAPT-------TTVCAKKEVVLSAGSV 275 (566)
T ss_dssp HHHHTHHHHTTCTTEEEESSCEEEEEECCEEETTEEECCEEEEES----STTSCC-------EEEEEEEEEEECCHHH
T ss_pred HHHHHhhhhccCCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEE----CCCceE-------EEEEeeeEEEEecCCc
Confidence 34555555556689999999999999996 23 6899999875 233 33 47899 7899999964
No 136
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=95.27 E-value=0.04 Score=43.83 Aligned_cols=60 Identities=17% Similarity=0.185 Sum_probs=46.0
Q ss_pred EEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 63 VVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 63 ~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
.+.+..+..+|.+.+++.|++++. .+|.++..+ ++.+ -|.+. +.++.++.||+|+|.++.
T Consensus 68 ~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~-~~~~-~v~~~----------------~~~~~~~~li~AtG~~~~ 127 (319)
T 3cty_A 68 SIVGSELAKLFADHAANYAKIREG-VEVRSIKKT-QGGF-DIETN----------------DDTYHAKYVIITTGTTHK 127 (319)
T ss_dssp SBCHHHHHHHHHHHHHTTSEEEET-CCEEEEEEE-TTEE-EEEES----------------SSEEEEEEEEECCCEEEC
T ss_pred ccCHHHHHHHHHHHHHHcCCEEEE-eeEEEEEEe-CCEE-EEEEC----------------CCEEEeCEEEECCCCCcc
Confidence 356678888999999999999998 789999775 3432 25553 247999999999998653
No 137
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=95.20 E-value=0.061 Score=47.07 Aligned_cols=66 Identities=15% Similarity=0.141 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccchHH
Q psy9486 67 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLTKSL 146 (165)
Q Consensus 67 ~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~~l 146 (165)
..+.+.|.+..++.||+|++++.|+++..+ ++ +|.+.+ |.++.||.||+|+|..... .+
T Consensus 228 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~---~v~~~~---------------g~~i~~D~Vi~a~G~~p~~--~~ 286 (588)
T 3ics_A 228 YEMAAYVHEHMKNHDVELVFEDGVDALEEN-GA---VVRLKS---------------GSVIQTDMLILAIGVQPES--SL 286 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEGG-GT---EEEETT---------------SCEEECSEEEECSCEEECC--HH
T ss_pred HHHHHHHHHHHHHcCCEEEECCeEEEEecC-CC---EEEECC---------------CCEEEcCEEEEccCCCCCh--HH
Confidence 356677888889999999999999999653 23 466654 4589999999999988754 35
Q ss_pred HhhcCCC
Q psy9486 147 SSRFNLR 153 (165)
Q Consensus 147 ~~~~gl~ 153 (165)
.+..|+.
T Consensus 287 l~~~g~~ 293 (588)
T 3ics_A 287 AKGAGLA 293 (588)
T ss_dssp HHHTTCC
T ss_pred HHhcCce
Confidence 5667764
No 138
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=95.18 E-value=0.039 Score=46.59 Aligned_cols=67 Identities=15% Similarity=0.039 Sum_probs=49.2
Q ss_pred EEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 63 VVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 63 ~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
...+..+.++|.+.+++.++.|+++++|+++..+ ++. +.|.+.+. .+|+. ..++.++.||+|+|.++
T Consensus 111 ~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~-~~~-~~V~~~~~---~~G~~------~~~~~~d~VVvAtG~~s 177 (447)
T 2gv8_A 111 FPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKK-DGS-WVVTYKGT---KAGSP------ISKDIFDAVSICNGHYE 177 (447)
T ss_dssp SCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEE-TTE-EEEEEEES---STTCC------EEEEEESEEEECCCSSS
T ss_pred CCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeC-CCe-EEEEEeec---CCCCe------eEEEEeCEEEECCCCCC
Confidence 4678899999999999999999999999999775 343 33555431 11210 02699999999999965
No 139
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=95.17 E-value=0.055 Score=42.84 Aligned_cols=64 Identities=19% Similarity=0.197 Sum_probs=48.5
Q ss_pred EEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 63 VVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 63 ~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
.+++..+..+|.+.+++.|++++.++ |.++..+ ++.+ -+.+... .+ +..+.++.||+|+|....
T Consensus 80 ~~~~~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~-~~~~-~v~~~~~---~~---------~~~~~~d~vvlAtG~~~~ 143 (338)
T 3itj_A 80 GLTGSELMDRMREQSTKFGTEIITET-VSKVDLS-SKPF-KLWTEFN---ED---------AEPVTTDAIILATGASAK 143 (338)
T ss_dssp CEEHHHHHHHHHHHHHHTTCEEECSC-EEEEECS-SSSE-EEEETTC---SS---------SCCEEEEEEEECCCEEEC
T ss_pred cCCHHHHHHHHHHHHHHcCCEEEEeE-EEEEEEc-CCEE-EEEEEec---CC---------CcEEEeCEEEECcCCCcC
Confidence 46788999999999999999999998 9998764 3443 3555320 01 347999999999998654
No 140
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=95.15 E-value=0.039 Score=43.29 Aligned_cols=54 Identities=20% Similarity=0.163 Sum_probs=41.6
Q ss_pred HHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 77 AEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 77 A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
.++.||+|++++.+.++..+ ++++.+|.+.. .+|+. .++.+|.||+|+|.....
T Consensus 193 ~~~~gv~~~~~~~v~~i~~~-~~~~~~v~~~~----~~g~~-------~~~~~D~vv~a~G~~p~~ 246 (315)
T 3r9u_A 193 KKNEKIELITSASVDEVYGD-KMGVAGVKVKL----KDGSI-------RDLNVPGIFTFVGLNVRN 246 (315)
T ss_dssp HHCTTEEEECSCEEEEEEEE-TTEEEEEEEEC----TTSCE-------EEECCSCEEECSCEEECC
T ss_pred HhcCCeEEEeCcEEEEEEcC-CCcEEEEEEEc----CCCCe-------EEeecCeEEEEEcCCCCc
Confidence 35789999999999999875 56888887762 23432 379999999999987643
No 141
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=95.13 E-value=0.054 Score=42.91 Aligned_cols=61 Identities=16% Similarity=0.127 Sum_probs=45.5
Q ss_pred HHHHHHHHHC-CCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 71 KWLGEQAEAM-GVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 71 ~~L~~~A~~~-Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
..+.+++.+. ||+|++++.+.++..+ ++++.+|.+.+. .+|+ +.++.+|.||+|+|.....
T Consensus 212 ~~~~~~l~~~~gv~i~~~~~v~~i~~~-~~~~~~v~~~~~---~~g~-------~~~i~~D~vi~a~G~~p~~ 273 (338)
T 3itj_A 212 TIMQKRAEKNEKIEILYNTVALEAKGD-GKLLNALRIKNT---KKNE-------ETDLPVSGLFYAIGHTPAT 273 (338)
T ss_dssp HHHHHHHHHCTTEEEECSEEEEEEEES-SSSEEEEEEEET---TTTE-------EEEEECSEEEECSCEEECC
T ss_pred HHHHHHHHhcCCeEEeecceeEEEEcc-cCcEEEEEEEEC---CCCc-------eEEEEeCEEEEEeCCCCCh
Confidence 4556667665 9999999999999875 567888877641 1221 2579999999999987644
No 142
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=95.09 E-value=0.051 Score=46.24 Aligned_cols=65 Identities=8% Similarity=0.071 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 67 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 67 ~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
..+.+++.+..++.||+|+++++|+++..+ ++.++.|...+. .++ .+.++.||.||+|+|.....
T Consensus 220 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~~~~~v~~~~~---~~~-------~~~~i~~D~vv~a~G~~p~~ 284 (474)
T 1zmd_A 220 MEISKNFQRILQKQGFKFKLNTKVTGATKK-SDGKIDVSIEAA---SGG-------KAEVITCDVLLVCIGRRPFT 284 (474)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEC-TTSCEEEEEEET---TSC-------CCEEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEeCceEEEEEEc-CCceEEEEEEec---CCC-------CceEEEcCEEEECcCCCcCC
Confidence 345667888889999999999999999875 333123443210 011 13579999999999988754
No 143
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=95.06 E-value=0.032 Score=47.14 Aligned_cols=58 Identities=21% Similarity=0.221 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 67 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 67 ~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
..+.+.|.+.+++.||+|++++.|+++..+ +++..|.+. +.++.|+.||+|+|.....
T Consensus 191 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~--~~v~~v~~~----------------~~~i~~d~vi~a~G~~p~~ 248 (447)
T 1nhp_A 191 KEFTDVLTEEMEANNITIATGETVERYEGD--GRVQKVVTD----------------KNAYDADLVVVAVGVRPNT 248 (447)
T ss_dssp HHHHHHHHHHHHTTTEEEEESCCEEEEECS--SBCCEEEES----------------SCEEECSEEEECSCEEESC
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEcc--CcEEEEEEC----------------CCEEECCEEEECcCCCCCh
Confidence 456678888899999999999999999653 555556653 2479999999999987754
No 144
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=95.02 E-value=0.027 Score=46.81 Aligned_cols=51 Identities=16% Similarity=0.183 Sum_probs=38.1
Q ss_pred HHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccC
Q psy9486 70 VKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGC 138 (165)
Q Consensus 70 d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~ 138 (165)
...+...+++.| +|+++++|++|..+ ++.|. |.+.+ |.++.||.||+|.|.
T Consensus 207 ~~l~~~~~~~~g-~i~~~~~V~~i~~~-~~~v~-v~~~~---------------g~~~~ad~vi~a~~~ 257 (431)
T 3k7m_X 207 ADLVDAMSQEIP-EIRLQTVVTGIDQS-GDVVN-VTVKD---------------GHAFQAHSVIVATPM 257 (431)
T ss_dssp HHHHHHHHTTCS-CEESSCCEEEEECS-SSSEE-EEETT---------------SCCEEEEEEEECSCG
T ss_pred HHHHHHHHhhCC-ceEeCCEEEEEEEc-CCeEE-EEECC---------------CCEEEeCEEEEecCc
Confidence 344445566678 99999999999875 44544 67754 346999999999994
No 145
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=95.00 E-value=0.063 Score=45.80 Aligned_cols=64 Identities=17% Similarity=0.234 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
.+.+.+.+..++.||+|++++.|.++..++++.+ .|.+.+. .+|+ ..++.+|.||+|+|.....
T Consensus 228 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~---~~~~-------~~~~~~D~vi~a~G~~p~~ 291 (483)
T 3dgh_A 228 QMAELVAASMEERGIPFLRKTVPLSVEKQDDGKL-LVKYKNV---ETGE-------ESEDVYDTVLWAIGRKGLV 291 (483)
T ss_dssp HHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCE-EEEEEET---TTCC-------EEEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcE-EEEEecC---CCCc-------eeEEEcCEEEECcccccCc
Confidence 4566778888899999999999999987544543 3655430 1121 1379999999999987654
No 146
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=94.87 E-value=0.042 Score=49.13 Aligned_cols=63 Identities=14% Similarity=0.312 Sum_probs=46.3
Q ss_pred CCCEEecCCceeEEEEcCC-CcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccchHHHhhcCCCC
Q psy9486 80 MGVEIYPGIPASEVLYHGD-GSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLTKSLSSRFNLRG 154 (165)
Q Consensus 80 ~Gv~i~~~~~v~~i~~~~~-g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~~l~~~~gl~~ 154 (165)
.|++|++++.|++|+.+++ ++++||+..+. ++|+. .++.|+.||+|+|.... .++....|+-+
T Consensus 273 ~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~---~~g~~-------~~i~A~~VIlaaG~~~s--~~lL~~sgiG~ 336 (623)
T 3pl8_A 273 ERFNLFPAVACERVVRNALNSEIESLHIHDL---ISGDR-------FEIKADVYVLTAGAVHN--TQLLVNSGFGQ 336 (623)
T ss_dssp EEEEEECSEEEEEEEECTTSSCEEEEEEEET---TTCCE-------EEECEEEEEECSCTTHH--HHHHHTTTSSC
T ss_pred CCEEEEeCCEEEEEEEECCCCEEEEEEEEEc---CCCcE-------EEEECCEEEEcCCCcCC--HHHHHhcCCCc
Confidence 3899999999999999643 48999988751 23432 37999999999997764 35555556544
No 147
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=94.86 E-value=0.021 Score=50.77 Aligned_cols=52 Identities=17% Similarity=0.412 Sum_probs=41.0
Q ss_pred HHCCCEEecCCceeEEEEcC-CCcEEEEEEccccccCCCCCCCCCCcCeEEEc-CEEEEcccCCc
Q psy9486 78 EAMGVEIYPGIPASEVLYHG-DGSVKGIATGDVGIAKDGSPKDTFARGMELHA-KVTIFAEGCHG 140 (165)
Q Consensus 78 ~~~Gv~i~~~~~v~~i~~~~-~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~A-k~VI~A~G~~s 140 (165)
.+.+++|++++.|++|+++. +++++||+... .+|.. ..++| |-||+|+|+-.
T Consensus 217 ~r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~----~~g~~-------~~v~A~keVILsaGa~~ 270 (577)
T 3q9t_A 217 NKPNITIVPEVHSKRLIINEADRTCKGVTVVT----AAGNE-------LNFFADREVILSQGVFE 270 (577)
T ss_dssp SCTTEEEECSEEEEEEEEETTTTEEEEEEEEE----TTSCE-------EEEEEEEEEEECSHHHH
T ss_pred cCCCeEEEcCcEEEEEEEeCCCCEEEEEEEEe----CCCcE-------EEEEeeeEEEEcccccC
Confidence 45799999999999999963 57999999875 23433 36888 67999999754
No 148
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=94.83 E-value=0.046 Score=43.52 Aligned_cols=45 Identities=11% Similarity=0.041 Sum_probs=34.3
Q ss_pred CCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEE-EcCEEEEcccCCccc
Q psy9486 81 GVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMEL-HAKVTIFAEGCHGHL 142 (165)
Q Consensus 81 Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i-~Ak~VI~A~G~~s~l 142 (165)
|++|+++++|++|..++ +.+. |.+.+ |..+ +|+.||+|+|+++.+
T Consensus 119 g~~i~~~~~v~~i~~~~-~~~~-v~~~~---------------g~~~~~a~~vV~a~g~~~~~ 164 (336)
T 1yvv_A 119 DMPVSFSCRITEVFRGE-EHWN-LLDAE---------------GQNHGPFSHVIIATPAPQAS 164 (336)
T ss_dssp TCCEECSCCEEEEEECS-SCEE-EEETT---------------SCEEEEESEEEECSCHHHHG
T ss_pred cCcEEecCEEEEEEEeC-CEEE-EEeCC---------------CcCccccCEEEEcCCHHHHH
Confidence 99999999999998864 4333 55543 2344 589999999998765
No 149
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=94.81 E-value=0.043 Score=44.11 Aligned_cols=61 Identities=20% Similarity=0.169 Sum_probs=46.0
Q ss_pred EEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEE-EEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 63 VVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGI-ATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 63 ~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV-~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
.+.+..+..+|.+.+++.|++++.++ |.++.. ++.. .| .+.+ |.++.++.||+|+|.++.
T Consensus 67 ~~~~~~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~~~~--~v~~~~~---------------g~~~~~d~lviAtG~~~~ 127 (335)
T 2a87_A 67 GITGPELMDEMREQALRFGADLRMED-VESVSL-HGPL--KSVVTAD---------------GQTHRARAVILAMGAAAR 127 (335)
T ss_dssp CBCHHHHHHHHHHHHHHTTCEEECCC-EEEEEC-SSSS--EEEEETT---------------SCEEEEEEEEECCCEEEC
T ss_pred CCCHHHHHHHHHHHHHHcCCEEEEee-EEEEEe-CCcE--EEEEeCC---------------CCEEEeCEEEECCCCCcc
Confidence 36778888999999999999999987 888865 2222 24 4433 357999999999998764
Q ss_pred c
Q psy9486 142 L 142 (165)
Q Consensus 142 l 142 (165)
.
T Consensus 128 ~ 128 (335)
T 2a87_A 128 Y 128 (335)
T ss_dssp C
T ss_pred C
Confidence 3
No 150
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=94.78 E-value=0.048 Score=46.78 Aligned_cols=57 Identities=23% Similarity=0.325 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
.+.+.+.+..++.||+|+++++|+++.. ++++.+|.+. |.++.||.||+|+|.....
T Consensus 237 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~v~~v~~~----------------g~~i~~D~Vi~a~G~~p~~ 293 (490)
T 2bc0_A 237 DLTDLMAKNMEEHGIQLAFGETVKEVAG--NGKVEKIITD----------------KNEYDVDMVILAVGFRPNT 293 (490)
T ss_dssp HHHHHHHHHHHTTTCEEEETCCEEEEEC--SSSCCEEEES----------------SCEEECSEEEECCCEEECC
T ss_pred HHHHHHHHHHHhCCeEEEeCCEEEEEEc--CCcEEEEEEC----------------CcEEECCEEEECCCCCcCh
Confidence 4556778888899999999999999964 4566566653 3579999999999987754
No 151
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=94.77 E-value=0.046 Score=43.09 Aligned_cols=61 Identities=16% Similarity=0.141 Sum_probs=45.3
Q ss_pred HHHHHHHHHH-CCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 70 VKWLGEQAEA-MGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 70 d~~L~~~A~~-~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
+..+.++.++ .||+++++++++++..+ ++++.+|++.+. .+|+. .++.+|.||+|+|....
T Consensus 182 ~~~~~~~l~~~~gv~v~~~~~v~~i~~~-~~~v~~v~~~~~---~~g~~-------~~i~~D~vi~a~G~~p~ 243 (310)
T 1fl2_A 182 DQVLQDKLRSLKNVDIILNAQTTEVKGD-GSKVVGLEYRDR---VSGDI-------HNIELAGIFVQIGLLPN 243 (310)
T ss_dssp CHHHHHHHHTCTTEEEESSEEEEEEEES-SSSEEEEEEEET---TTCCE-------EEEECSEEEECSCEEES
T ss_pred cHHHHHHHhhCCCeEEecCCceEEEEcC-CCcEEEEEEEEC---CCCcE-------EEEEcCEEEEeeCCccC
Confidence 3456677777 69999999999999864 578888887641 12321 37999999999997654
No 152
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=94.75 E-value=0.096 Score=44.42 Aligned_cols=62 Identities=10% Similarity=0.067 Sum_probs=44.3
Q ss_pred HHHHHHHHHH-HHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 68 HVVKWLGEQA-EAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 68 ~~d~~L~~~A-~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
.+.+.|.+.. ++.||+|+++++|+++..+ ++. +.|.+.. .+|+ ..++.||.||+|+|.....
T Consensus 216 ~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~-~~~-~~v~~~~----~~g~-------~~~i~~D~vv~a~G~~p~~ 278 (468)
T 2qae_A 216 DVTNALVGALAKNEKMKFMTSTKVVGGTNN-GDS-VSLEVEG----KNGK-------RETVTCEALLVSVGRRPFT 278 (468)
T ss_dssp HHHHHHHHHHHHHTCCEEECSCEEEEEEEC-SSS-EEEEEEC----C----------EEEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHhhcCCcEEEeCCEEEEEEEc-CCe-EEEEEEc----CCCc-------eEEEECCEEEECCCcccCC
Confidence 4566778888 8999999999999999875 333 3455431 1221 1479999999999988755
No 153
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=94.74 E-value=0.072 Score=42.09 Aligned_cols=60 Identities=18% Similarity=0.240 Sum_probs=45.7
Q ss_pred EEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 64 VRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 64 i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
+.+..+..++.+.+++.|++++.++ |..+..+ ++.+. | +.+ +..+.++.+|+|+|.++..
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~-v~~i~~~-~~~~~-v-~~~---------------~~~~~~~~lv~AtG~~~~~ 118 (320)
T 1trb_A 59 LTGPLLMERMHEHATKFETEIIFDH-INKVDLQ-NRPFR-L-NGD---------------NGEYTCDALIIATGASARY 118 (320)
T ss_dssp CBHHHHHHHHHHHHHHTTCEEECCC-EEEEECS-SSSEE-E-EES---------------SCEEEEEEEEECCCEEECC
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEee-eeEEEec-CCEEE-E-EeC---------------CCEEEcCEEEECCCCCcCC
Confidence 5678889999999999999999986 8888664 34332 3 332 3579999999999987543
No 154
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.69 E-value=0.047 Score=45.16 Aligned_cols=63 Identities=22% Similarity=0.357 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccchHH
Q psy9486 67 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLTKSL 146 (165)
Q Consensus 67 ~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~~l 146 (165)
..+.+++.+..++.||+++++++|+++. .. +|.+.+ |. +.+|.||.|+|..... .+
T Consensus 183 ~~~~~~l~~~l~~~gV~i~~~~~v~~i~---~~---~v~~~~---------------g~-i~~D~vi~a~G~~p~~--~l 238 (367)
T 1xhc_A 183 EELSNMIKDMLEETGVKFFLNSELLEAN---EE---GVLTNS---------------GF-IEGKVKICAIGIVPNV--DL 238 (367)
T ss_dssp HHHHHHHHHHHHHTTEEEECSCCEEEEC---SS---EEEETT---------------EE-EECSCEEEECCEEECC--HH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEE---ee---EEEECC---------------CE-EEcCEEEECcCCCcCH--HH
Confidence 3566788888999999999999999984 12 466654 44 9999999999988765 26
Q ss_pred HhhcCCC
Q psy9486 147 SSRFNLR 153 (165)
Q Consensus 147 ~~~~gl~ 153 (165)
.+..|+.
T Consensus 239 l~~~gl~ 245 (367)
T 1xhc_A 239 ARRSGIH 245 (367)
T ss_dssp HHHTTCC
T ss_pred HHhCCCC
Confidence 6667765
No 155
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=94.51 E-value=0.052 Score=46.02 Aligned_cols=55 Identities=20% Similarity=0.204 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHC--------CCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCC
Q psy9486 68 HVVKWLGEQAEAM--------GVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 139 (165)
Q Consensus 68 ~~d~~L~~~A~~~--------Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~ 139 (165)
.+.+.|++...+. |++|+++++|++|..+ ++.|. |.+.+ |.+++|+.||+|.+.+
T Consensus 207 ~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~-~~~v~-v~~~~---------------g~~~~ad~vI~a~~~~ 269 (472)
T 1b37_A 207 AVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYS-PGGVT-VKTED---------------NSVYSADYVMVSASLG 269 (472)
T ss_dssp HHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEEC-SSCEE-EEETT---------------SCEEEESEEEECSCHH
T ss_pred HHHHHHHHhccccccccccccccEEEcCCEEEEEEEc-CCcEE-EEECC---------------CCEEEcCEEEEecCHH
Confidence 4555666655543 7899999999999986 45555 77765 4589999999999964
No 156
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=94.47 E-value=0.075 Score=41.25 Aligned_cols=62 Identities=18% Similarity=0.115 Sum_probs=47.4
Q ss_pred EEEhHHHHHHHHHHHHHC-CCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 63 VVRLGHVVKWLGEQAEAM-GVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 63 ~i~r~~~d~~L~~~A~~~-Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
.++...+..++.+.+++. +++++.+ +|+++..+ ++. .-|.+.+ |.++.++.||+|+|..+.
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i~~~-~~~-~~v~~~~---------------g~~~~~d~vviAtG~~~~ 113 (297)
T 3fbs_A 52 GKAPGEIIAEARRQIERYPTIHWVEG-RVTDAKGS-FGE-FIVEIDG---------------GRRETAGRLILAMGVTDE 113 (297)
T ss_dssp TCCHHHHHHHHHHHHTTCTTEEEEES-CEEEEEEE-TTE-EEEEETT---------------SCEEEEEEEEECCCCEEE
T ss_pred CCCHHHHHHHHHHHHHhcCCeEEEEe-EEEEEEEc-CCe-EEEEECC---------------CCEEEcCEEEECCCCCCC
Confidence 466788899999999987 7888764 89999876 333 3466654 357999999999998764
Q ss_pred c
Q psy9486 142 L 142 (165)
Q Consensus 142 l 142 (165)
.
T Consensus 114 ~ 114 (297)
T 3fbs_A 114 L 114 (297)
T ss_dssp C
T ss_pred C
Confidence 3
No 157
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=94.33 E-value=0.053 Score=46.54 Aligned_cols=53 Identities=15% Similarity=-0.038 Sum_probs=40.1
Q ss_pred HHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 71 KWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 71 ~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
.+....+++.|++|+++++|++|..+ +++|. |.+.+ |.++.||.||+|.+...
T Consensus 216 ~l~~~l~~~lg~~i~~~~~V~~i~~~-~~~v~-v~~~~---------------g~~~~ad~VI~a~p~~~ 268 (520)
T 1s3e_A 216 QVSERIMDLLGDRVKLERPVIYIDQT-RENVL-VETLN---------------HEMYEAKYVISAIPPTL 268 (520)
T ss_dssp HHHHHHHHHHGGGEESSCCEEEEECS-SSSEE-EEETT---------------SCEEEESEEEECSCGGG
T ss_pred HHHHHHHHHcCCcEEcCCeeEEEEEC-CCeEE-EEECC---------------CeEEEeCEEEECCCHHH
Confidence 33333445569999999999999885 55655 77764 45899999999999765
No 158
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=94.33 E-value=0.12 Score=40.44 Aligned_cols=67 Identities=16% Similarity=0.149 Sum_probs=47.9
Q ss_pred HHHHHHH-CCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccchHHHhhcC
Q psy9486 73 LGEQAEA-MGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLTKSLSSRFN 151 (165)
Q Consensus 73 L~~~A~~-~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~~l~~~~g 151 (165)
+.+++.+ .||++++++.++++..+ +++.+|.+.+. .+|+. .++.+|.||.|+|..... .+.+.+|
T Consensus 195 ~~~~~~~~~gv~~~~~~~v~~i~~~--~~~~~v~~~~~---~~g~~-------~~~~~D~vv~a~G~~p~~--~~~~~~g 260 (323)
T 3f8d_A 195 YVETVKKKPNVEFVLNSVVKEIKGD--KVVKQVVVENL---KTGEI-------KELNVNGVFIEIGFDPPT--DFAKSNG 260 (323)
T ss_dssp HHHHHHTCTTEEEECSEEEEEEEES--SSEEEEEEEET---TTCCE-------EEEECSEEEECCCEECCH--HHHHHTT
T ss_pred HHHHHHhCCCcEEEeCCEEEEEecc--CceeEEEEEEC---CCCce-------EEEEcCEEEEEECCCCCh--hHHhhcC
Confidence 4455555 59999999999999763 67777877641 12321 279999999999987743 5667777
Q ss_pred CC
Q psy9486 152 LR 153 (165)
Q Consensus 152 l~ 153 (165)
+.
T Consensus 261 ~~ 262 (323)
T 3f8d_A 261 IE 262 (323)
T ss_dssp CC
T ss_pred ee
Confidence 65
No 159
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=94.31 E-value=0.18 Score=42.80 Aligned_cols=77 Identities=18% Similarity=0.122 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccchHH-
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLTKSL- 146 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~~l- 146 (165)
.+.+.+.+..++.||+|++++.|+++..++++..+.|.+.+.+ .|+. .|.++.+|.||+|+|...... .|
T Consensus 229 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~---~g~~-----~g~~~~~D~vi~a~G~~p~~~-~l~ 299 (478)
T 3dk9_A 229 MISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPG---RLPV-----MTMIPDVDCLLWAIGRVPNTK-DLS 299 (478)
T ss_dssp HHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTT---SCCE-----EEEEEEESEEEECSCEEESCT-TSC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCC---CCcc-----cceEEEcCEEEEeeccccCCC-CCC
Confidence 4566778888899999999999999987544523446665310 1210 024799999999999876542 22
Q ss_pred HhhcCCC
Q psy9486 147 SSRFNLR 153 (165)
Q Consensus 147 ~~~~gl~ 153 (165)
.+..|+.
T Consensus 300 l~~~g~~ 306 (478)
T 3dk9_A 300 LNKLGIQ 306 (478)
T ss_dssp GGGGTCC
T ss_pred chhcCCe
Confidence 3445654
No 160
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=94.29 E-value=0.14 Score=43.52 Aligned_cols=75 Identities=11% Similarity=0.053 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccchHH
Q psy9486 67 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLTKSL 146 (165)
Q Consensus 67 ~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~~l 146 (165)
..+.+.|.+..++.||+|++++.|+++..+ ++. +.|.+.+. ..|+. .++.+|.||+|+|..+....-.
T Consensus 210 ~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~-~~~-~~v~~~~~---~~g~~-------~~i~~D~vv~a~G~~p~~~~l~ 277 (464)
T 2eq6_A 210 PETAALLRRALEKEGIRVRTKTKAVGYEKK-KDG-LHVRLEPA---EGGEG-------EEVVVDKVLVAVGRKPRTEGLG 277 (464)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEE-TTE-EEEEEEET---TCCSC-------EEEEESEEEECSCEEESCTTSS
T ss_pred HHHHHHHHHHHHhcCCEEEcCCEEEEEEEe-CCE-EEEEEeec---CCCce-------eEEEcCEEEECCCcccCCCCCC
Confidence 456677888889999999999999999765 343 33555320 11321 2799999999999887653211
Q ss_pred HhhcCCC
Q psy9486 147 SSRFNLR 153 (165)
Q Consensus 147 ~~~~gl~ 153 (165)
.+..|+.
T Consensus 278 l~~~g~~ 284 (464)
T 2eq6_A 278 LEKAGVK 284 (464)
T ss_dssp HHHHTCC
T ss_pred hhhcCce
Confidence 3345553
No 161
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=94.27 E-value=0.095 Score=44.49 Aligned_cols=61 Identities=18% Similarity=0.120 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
.+.+.+.+..++.||+|+++++|+++..+ ++.+ .|.+.+ .+| ..++.+|.||+|+|.....
T Consensus 222 ~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~-~~~~-~v~~~~----~~g--------~~~~~~D~vi~a~G~~p~~ 282 (476)
T 3lad_A 222 QVAKEAQKILTKQGLKILLGARVTGTEVK-NKQV-TVKFVD----AEG--------EKSQAFDKLIVAVGRRPVT 282 (476)
T ss_dssp HHHHHHHHHHHHTTEEEEETCEEEEEEEC-SSCE-EEEEES----SSE--------EEEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEEc-CCEE-EEEEEe----CCC--------cEEEECCEEEEeeCCcccC
Confidence 45667777888899999999999999875 3443 355443 111 0479999999999987654
No 162
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=94.26 E-value=0.085 Score=42.53 Aligned_cols=53 Identities=9% Similarity=0.152 Sum_probs=38.0
Q ss_pred HHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCC
Q psy9486 70 VKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 139 (165)
Q Consensus 70 d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~ 139 (165)
...+...+++.|++|+++++|++|..+ ++.+. |.+.+ |..+.||.||+|+.+.
T Consensus 112 ~~l~~~l~~~~g~~i~~~~~V~~i~~~-~~~~~-v~~~~---------------g~~~~ad~vV~A~p~~ 164 (342)
T 3qj4_A 112 SSIIKHYLKESGAEVYFRHRVTQINLR-DDKWE-VSKQT---------------GSPEQFDLIVLTMPVP 164 (342)
T ss_dssp THHHHHHHHHHTCEEESSCCEEEEEEC-SSSEE-EEESS---------------SCCEEESEEEECSCHH
T ss_pred HHHHHHHHHhcCCEEEeCCEEEEEEEc-CCEEE-EEECC---------------CCEEEcCEEEECCCHH
Confidence 334344444569999999999999986 44443 66654 3458999999999853
No 163
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=93.87 E-value=0.11 Score=44.99 Aligned_cols=71 Identities=11% Similarity=0.092 Sum_probs=52.9
Q ss_pred cEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCC------cEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEE
Q psy9486 61 NYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDG------SVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIF 134 (165)
Q Consensus 61 ~~~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g------~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~ 134 (165)
.+..+|.+|.++|...|++.+..|.+++.|+++...+++ ...-|.+.+. .+|+ ..++.|+.||+
T Consensus 139 ~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~---~~g~-------~~~~~ar~vVl 208 (501)
T 4b63_A 139 TFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNV---ETGE-------ISARRTRKVVI 208 (501)
T ss_dssp CSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEET---TTCC-------EEEEEEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecC---CCce-------EEEEEeCEEEE
Confidence 456789999999999999999889999999999885432 2344666541 1232 24799999999
Q ss_pred cccCCcc
Q psy9486 135 AEGCHGH 141 (165)
Q Consensus 135 A~G~~s~ 141 (165)
|+|....
T Consensus 209 atG~~P~ 215 (501)
T 4b63_A 209 AIGGTAK 215 (501)
T ss_dssp CCCCEEC
T ss_pred CcCCCCC
Confidence 9996543
No 164
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=93.76 E-value=0.12 Score=42.85 Aligned_cols=54 Identities=17% Similarity=0.232 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 67 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 67 ~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
..+.+.+.+..++.||+++++++|+++.- + +|.+.+ |.++.+|.||+|.|....
T Consensus 218 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~---~---~v~~~~---------------g~~~~~D~vi~a~G~~~~ 271 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKLVHNFKIKEIRE---H---EIVDEK---------------GNTIPADITILLPPYTGN 271 (409)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEECS---S---EEEETT---------------SCEEECSEEEEECCEECC
T ss_pred HHHHHHHHHHHHHCCCEEEcCCceEEECC---C---eEEECC---------------CCEEeeeEEEECCCCCcc
Confidence 46777888889999999999999999842 2 366654 468999999999998763
No 165
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=93.65 E-value=0.074 Score=41.28 Aligned_cols=62 Identities=10% Similarity=-0.009 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccchHHHh
Q psy9486 69 VVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLTKSLSS 148 (165)
Q Consensus 69 ~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~~l~~ 148 (165)
+...+.+..++.||+++. +.|+++.- ++ +|.+.+ |.++.+|.||.|+|..... .+.+
T Consensus 176 ~~~~~~~~l~~~gv~i~~-~~v~~i~~--~~---~v~~~~---------------g~~~~~D~vi~a~G~~p~~--~~~~ 232 (297)
T 3fbs_A 176 PDADQHALLAARGVRVET-TRIREIAG--HA---DVVLAD---------------GRSIALAGLFTQPKLRITV--DWIE 232 (297)
T ss_dssp CCHHHHHHHHHTTCEEEC-SCEEEEET--TE---EEEETT---------------SCEEEESEEEECCEEECCC--SCHH
T ss_pred CCHHHHHHHHHCCcEEEc-ceeeeeec--CC---eEEeCC---------------CCEEEEEEEEEccCcccCc--hhHH
Confidence 566778888899999996 88988853 23 566654 4589999999999987543 2444
Q ss_pred hcCCC
Q psy9486 149 RFNLR 153 (165)
Q Consensus 149 ~~gl~ 153 (165)
.+++.
T Consensus 233 ~~g~~ 237 (297)
T 3fbs_A 233 KLGCA 237 (297)
T ss_dssp HHTCC
T ss_pred hcCCc
Confidence 46654
No 166
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=93.28 E-value=0.34 Score=41.28 Aligned_cols=73 Identities=19% Similarity=0.251 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccchHH-
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLTKSL- 146 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~~l- 146 (165)
.+.+.+.+..++.||+|+++++|.++..+ ++. +.|.+.+. .+|+ ..++.+|.||+|+|...... .|
T Consensus 240 ~~~~~l~~~l~~~gV~v~~~~~v~~i~~~-~~~-~~v~~~~~---~~g~-------~~~i~~D~Vi~a~G~~p~~~-~l~ 306 (491)
T 3urh_A 240 EVAKQLQRMLTKQGIDFKLGAKVTGAVKS-GDG-AKVTFEPV---KGGE-------ATTLDAEVVLIATGRKPSTD-GLG 306 (491)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEEE-TTE-EEEEEEET---TSCC-------CEEEEESEEEECCCCEECCT-TSC
T ss_pred HHHHHHHHHHHhCCCEEEECCeEEEEEEe-CCE-EEEEEEec---CCCc-------eEEEEcCEEEEeeCCccCCC-ccC
Confidence 45667778888899999999999999875 343 33554420 1132 14799999999999876552 22
Q ss_pred HhhcCCC
Q psy9486 147 SSRFNLR 153 (165)
Q Consensus 147 ~~~~gl~ 153 (165)
.+..|+.
T Consensus 307 l~~~g~~ 313 (491)
T 3urh_A 307 LAKAGVV 313 (491)
T ss_dssp HHHHTCC
T ss_pred chhcCce
Confidence 3345553
No 167
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=93.24 E-value=0.22 Score=41.98 Aligned_cols=61 Identities=11% Similarity=0.170 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
.+.+.+.+..++.||+|+++++|+++..+ ++. +.|.+.. +| .+.++.+|.||+|+|.....
T Consensus 212 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~-~~v~~~~-----~g-------~~~~~~~D~vv~a~G~~p~~ 272 (455)
T 1ebd_A 212 QMAAIIKKRLKKKGVEVVTNALAKGAEER-EDG-VTVTYEA-----NG-------ETKTIDADYVLVTVGRRPNT 272 (455)
T ss_dssp HHHHHHHHHHHHTTCEEEESEEEEEEEEE-TTE-EEEEEEE-----TT-------EEEEEEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEe-CCe-EEEEEEe-----CC-------ceeEEEcCEEEECcCCCccc
Confidence 45667788888999999999999999765 333 3344431 11 03579999999999988754
No 168
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=93.17 E-value=0.23 Score=39.38 Aligned_cols=60 Identities=20% Similarity=0.130 Sum_probs=43.5
Q ss_pred HHHHHHHHH-CCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 71 KWLGEQAEA-MGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 71 ~~L~~~A~~-~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
..+.+++.+ .||+|+++++++++.. ++++.+|.+.+. .+|+. .++.+|.||+|+|.....
T Consensus 191 ~~~~~~l~~~~gv~i~~~~~v~~i~~--~~~v~~v~~~~~---~~g~~-------~~i~~D~vi~a~G~~p~~ 251 (325)
T 2q7v_A 191 KVAQARAFANPKMKFIWDTAVEEIQG--ADSVSGVKLRNL---KTGEV-------SELATDGVFIFIGHVPNT 251 (325)
T ss_dssp HHHHHHHHTCTTEEEECSEEEEEEEE--SSSEEEEEEEET---TTCCE-------EEEECSEEEECSCEEESC
T ss_pred hHHHHHHHhcCCceEecCCceEEEcc--CCcEEEEEEEEC---CCCcE-------EEEEcCEEEEccCCCCCh
Confidence 445666655 6999999999999976 467778877531 13321 379999999999977643
No 169
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=93.12 E-value=0.084 Score=44.43 Aligned_cols=58 Identities=19% Similarity=0.237 Sum_probs=40.2
Q ss_pred hHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEE---ccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 66 LGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIAT---GDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 66 r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~---~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
+.-+......-++.+|++|+++++|++|..+ +++ +.|.+ .+ |.+++|+.||+|.+.+.
T Consensus 234 ~gG~~~l~~~l~~~lg~~i~~~~~V~~i~~~-~~~-~~v~~~~~~~---------------g~~~~ad~vV~a~~~~~ 294 (478)
T 2ivd_A 234 DGGLQVLIDALAASLGDAAHVGARVEGLARE-DGG-WRLIIEEHGR---------------RAELSVAQVVLAAPAHA 294 (478)
T ss_dssp TTCTHHHHHHHHHHHGGGEESSEEEEEEECC---C-CEEEEEETTE---------------EEEEECSEEEECSCHHH
T ss_pred CCCHHHHHHHHHHHhhhhEEcCCEEEEEEec-CCe-EEEEEeecCC---------------CceEEcCEEEECCCHHH
Confidence 3334444344445568899999999999886 344 46776 33 35799999999999765
No 170
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=93.11 E-value=0.14 Score=42.50 Aligned_cols=42 Identities=14% Similarity=0.295 Sum_probs=33.7
Q ss_pred CEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 82 VEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 82 v~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
++|+++++|++|..+ ++. +.|.+.+ |..+.|+.||+|...+.
T Consensus 248 ~~i~~~~~V~~i~~~-~~~-~~v~~~~---------------g~~~~ad~vi~a~p~~~ 289 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHS-GSC-YSLELDN---------------GVTLDADSVIVTAPHKA 289 (470)
T ss_dssp EEEECSCCEEEEEEC-SSS-EEEEESS---------------SCEEEESEEEECSCHHH
T ss_pred CEEEeCCceEEEEEc-CCe-EEEEECC---------------CCEEECCEEEECCCHHH
Confidence 799999999999986 344 3477764 45799999999998764
No 171
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=93.02 E-value=0.058 Score=46.30 Aligned_cols=78 Identities=19% Similarity=0.166 Sum_probs=48.8
Q ss_pred HHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEcccc---ccCCCCCCCCCCcC--eEEEcCEEEEcccCCcccchHHHh
Q psy9486 74 GEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVG---IAKDGSPKDTFARG--MELHAKVTIFAEGCHGHLTKSLSS 148 (165)
Q Consensus 74 ~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g---~~~~g~~~~~~~~g--~~i~Ak~VI~A~G~~s~l~~~l~~ 148 (165)
.+.+++.||++++++.+.++.- +++|.+|++.++- -|.+|+....+.+| .++.||.||+|.|........+.+
T Consensus 309 ~~~~~~~Gv~~~~~~~~~~i~~--~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~~~l~ 386 (456)
T 2vdc_G 309 VAHAEEEGVEFIWQAAPEGFTG--DTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLPNAFD 386 (456)
T ss_dssp HHHHHHTTCEEECCSSSCCEEE--EEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEECCCHHHHHH
T ss_pred HHHHHHCCCEEEeCCCceEEeC--CCcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCCCcchhhcc
Confidence 4568889999999999999974 4677666554210 11234322111122 469999999999986533222556
Q ss_pred hcCCC
Q psy9486 149 RFNLR 153 (165)
Q Consensus 149 ~~gl~ 153 (165)
.+|+.
T Consensus 387 ~~gl~ 391 (456)
T 2vdc_G 387 EPELK 391 (456)
T ss_dssp STTSC
T ss_pred cCCee
Confidence 66664
No 172
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=92.93 E-value=0.26 Score=38.64 Aligned_cols=61 Identities=13% Similarity=0.037 Sum_probs=43.3
Q ss_pred HHHHHHHHH-CCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 71 KWLGEQAEA-MGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 71 ~~L~~~A~~-~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
..+.+++.+ .||++++++.+.++..+ ++++.+|.+.+. .+|+. .++.+|.||+|+|.....
T Consensus 182 ~~~~~~l~~~~gv~v~~~~~v~~i~~~-~~~v~~v~~~~~---~~g~~-------~~i~~D~vi~a~G~~p~~ 243 (311)
T 2q0l_A 182 PITLEHAKNNDKIEFLTPYVVEEIKGD-ASGVSSLSIKNT---ATNEK-------RELVVPGFFIFVGYDVNN 243 (311)
T ss_dssp HHHHHHHHTCTTEEEETTEEEEEEEEE-TTEEEEEEEEET---TTCCE-------EEEECSEEEECSCEEECC
T ss_pred HHHHHHHhhCCCeEEEeCCEEEEEECC-CCcEeEEEEEec---CCCce-------EEEecCEEEEEecCccCh
Confidence 345566654 79999999999999765 466767776521 12321 379999999999987643
No 173
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=92.75 E-value=0.38 Score=40.66 Aligned_cols=61 Identities=23% Similarity=0.290 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
.+-+++.+..++.||++++++.|+++..+ ++.+ .|.+.+ +|+ +.++.+|.||.|+|.....
T Consensus 213 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~~-~v~~~~-----~g~-------~~~~~~D~vv~a~G~~p~~ 273 (464)
T 2a8x_A 213 DVSKEIEKQFKKLGVTILTATKVESIADG-GSQV-TVTVTK-----DGV-------AQELKAEKVLQAIGFAPNV 273 (464)
T ss_dssp HHHHHHHHHHHHHTCEEECSCEEEEEEEC-SSCE-EEEEES-----SSC-------EEEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHHcCCEEEeCcEEEEEEEc-CCeE-EEEEEc-----CCc-------eEEEEcCEEEECCCCCccC
Confidence 45567788888999999999999999764 3333 344431 121 1479999999999987754
No 174
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=92.74 E-value=0.14 Score=42.79 Aligned_cols=47 Identities=21% Similarity=0.359 Sum_probs=35.7
Q ss_pred HHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCC
Q psy9486 76 QAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 139 (165)
Q Consensus 76 ~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~ 139 (165)
.++++|++|+++++|++|..+ ++..+.|.+ + |.++.||.||+|.+..
T Consensus 221 l~~~lg~~i~~~~~V~~i~~~-~~~~v~v~~-~---------------~~~~~ad~VI~a~p~~ 267 (453)
T 2yg5_A 221 MAEALGDDVFLNAPVRTVKWN-ESGATVLAD-G---------------DIRVEASRVILAVPPN 267 (453)
T ss_dssp HHHHHGGGEECSCCEEEEEEE-TTEEEEEET-T---------------TEEEEEEEEEECSCGG
T ss_pred HHHhcCCcEEcCCceEEEEEe-CCceEEEEE-C---------------CeEEEcCEEEEcCCHH
Confidence 345569999999999999886 444123554 2 3589999999999976
No 175
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=92.55 E-value=0.26 Score=40.72 Aligned_cols=51 Identities=14% Similarity=0.159 Sum_probs=38.6
Q ss_pred HHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 72 WLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 72 ~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
.....+++.+.+|+++++|++|..+ +++|. |.+.+ | ++.||.||+|.+.+.
T Consensus 208 l~~~l~~~l~~~v~~~~~V~~i~~~-~~~v~-v~~~~---------------g-~~~ad~Vv~a~~~~~ 258 (424)
T 2b9w_A 208 MFEHLNATLEHPAERNVDITRITRE-DGKVH-IHTTD---------------W-DRESDVLVLTVPLEK 258 (424)
T ss_dssp HHHHHHHHSSSCCBCSCCEEEEECC-TTCEE-EEESS---------------C-EEEESEEEECSCHHH
T ss_pred HHHHHHHhhcceEEcCCEEEEEEEE-CCEEE-EEECC---------------C-eEEcCEEEECCCHHH
Confidence 3334455678889999999999885 55655 77764 3 599999999999764
No 176
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=92.51 E-value=0.21 Score=42.22 Aligned_cols=63 Identities=13% Similarity=0.105 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
.+-+.|.+..++.||+|+++++|.++..+ ++. +.|.+.+. .+|+ +.++.+|.||+|+|.....
T Consensus 219 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~-~~v~~~~~---~~g~-------~~~~~~D~vv~a~G~~p~~ 281 (470)
T 1dxl_A 219 EIRKQFQRSLEKQGMKFKLKTKVVGVDTS-GDG-VKLTVEPS---AGGE-------QTIIEADVVLVSAGRTPFT 281 (470)
T ss_dssp HHHHHHHHHHHHSSCCEECSEEEEEEECS-SSS-EEEEEEES---SSCC-------CEEEEESEEECCCCEEECC
T ss_pred HHHHHHHHHHHHcCCEEEeCCEEEEEEEc-CCe-EEEEEEec---CCCc-------ceEEECCEEEECCCCCcCC
Confidence 45667788888999999999999999764 333 33444310 1221 2579999999999988754
No 177
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=92.43 E-value=0.22 Score=41.92 Aligned_cols=61 Identities=15% Similarity=0.134 Sum_probs=41.0
Q ss_pred EEEEhHHHHHHHHHHHHHCC-CEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 62 YVVRLGHVVKWLGEQAEAMG-VEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 62 ~~i~r~~~d~~L~~~A~~~G-v~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
+..-+.-+..+...-++.++ ++|+++++|++|..+ ++.+ .|.+.+ | .+.|+.||+|.+.+.
T Consensus 228 ~~~~~~G~~~l~~~l~~~l~~~~i~~~~~V~~i~~~-~~~~-~v~~~~---------------g-~~~ad~vV~a~p~~~ 289 (475)
T 3lov_A 228 FLSLETGLESLIERLEEVLERSEIRLETPLLAISRE-DGRY-RLKTDH---------------G-PEYADYVLLTIPHPQ 289 (475)
T ss_dssp EEEETTCHHHHHHHHHHHCSSCEEESSCCCCEEEEE-TTEE-EEECTT---------------C-CEEESEEEECSCHHH
T ss_pred EEeeCChHHHHHHHHHhhccCCEEEcCCeeeEEEEe-CCEE-EEEECC---------------C-eEECCEEEECCCHHH
Confidence 33333434444333344444 799999999999886 4443 366654 4 699999999999764
No 178
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=92.42 E-value=0.24 Score=42.35 Aligned_cols=67 Identities=16% Similarity=0.134 Sum_probs=46.5
Q ss_pred HHHHHHHHHHH--------------CCCEEecCCceeEEEEcCCC-cEEEEEEccccccC---------CCCCCCCCCcC
Q psy9486 69 VVKWLGEQAEA--------------MGVEIYPGIPASEVLYHGDG-SVKGIATGDVGIAK---------DGSPKDTFARG 124 (165)
Q Consensus 69 ~d~~L~~~A~~--------------~Gv~i~~~~~v~~i~~~~~g-~V~GV~~~~~g~~~---------~g~~~~~~~~g 124 (165)
+.+.|.+.+++ .|++|++++.+.+|.-++++ +|.+|++..+-.+. +|+ .
T Consensus 245 ~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~-------~ 317 (460)
T 1cjc_A 245 LMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGD-------V 317 (460)
T ss_dssp HHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEE-------E
T ss_pred HHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCc-------e
Confidence 44566666766 89999999999999764336 88888765311100 111 1
Q ss_pred eEEEcCEEEEcccCCccc
Q psy9486 125 MELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 125 ~~i~Ak~VI~A~G~~s~l 142 (165)
.++.|+.||.|.|..+..
T Consensus 318 ~~i~~d~Vi~a~G~~p~~ 335 (460)
T 1cjc_A 318 EDLPCGLVLSSIGYKSRP 335 (460)
T ss_dssp EEEECSEEEECCCEECCC
T ss_pred EEEEcCEEEECCCCCCCC
Confidence 479999999999988754
No 179
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=92.37 E-value=0.22 Score=46.95 Aligned_cols=76 Identities=17% Similarity=0.189 Sum_probs=49.7
Q ss_pred HHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcC--eEEEcCEEEEcccCCcccchHHHhhc-
Q psy9486 74 GEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARG--MELHAKVTIFAEGCHGHLTKSLSSRF- 150 (165)
Q Consensus 74 ~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g--~~i~Ak~VI~A~G~~s~l~~~l~~~~- 150 (165)
.+.+++.||+|++++.+.++..+ +++|.+|++.++-.+.+|..+. ..| .++.||.||+|.|..... ..+.+.+
T Consensus 377 ~~~~~~~Gv~~~~~~~~~~i~~~-~g~v~~v~~~~~~~~~~g~~~~--~~g~~~~i~aD~Vi~A~G~~~~~-~~l~~~~~ 452 (1025)
T 1gte_A 377 VELAKEEKCEFLPFLSPRKVIVK-GGRIVAVQFVRTEQDETGKWNE--DEDQIVHLKADVVISAFGSVLRD-PKVKEALS 452 (1025)
T ss_dssp HHHHHHTTCEEECSEEEEEEEEE-TTEEEEEEEEEEEECTTSCEEE--EEEEEEEEECSEEEECSCEECCC-HHHHHHTT
T ss_pred HHHHHHcCCEEEeCCCceEEEcc-CCeEEEEEEEEeEEcCCCCccc--CCCceEEEECCEEEECCCCCCCc-hhhhhccc
Confidence 36778899999999999999874 6889888775322223442110 011 368999999999985432 2344432
Q ss_pred CCC
Q psy9486 151 NLR 153 (165)
Q Consensus 151 gl~ 153 (165)
|+.
T Consensus 453 gl~ 455 (1025)
T 1gte_A 453 PIK 455 (1025)
T ss_dssp TSC
T ss_pred Cce
Confidence 543
No 180
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=92.32 E-value=0.44 Score=40.63 Aligned_cols=74 Identities=14% Similarity=0.151 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccchHH-
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLTKSL- 146 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~~l- 146 (165)
.+.+.+.+..++.||++++++.+.++...+++.+ .|...+. .+|+. .++.+|.||+|+|...... .+
T Consensus 226 ~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~-~v~~~~~---~~g~~-------~~~~~D~vi~a~G~~p~~~-~l~ 293 (488)
T 3dgz_A 226 QMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQL-QVTWEDH---ASGKE-------DTGTFDTVLWAIGRVPETR-TLN 293 (488)
T ss_dssp HHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCE-EEEEEET---TTTEE-------EEEEESEEEECSCEEESCG-GGT
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcE-EEEEEeC---CCCee-------EEEECCEEEEcccCCcccC-cCC
Confidence 4667778888899999999999999977434443 3544431 11211 2589999999999876552 22
Q ss_pred HhhcCCC
Q psy9486 147 SSRFNLR 153 (165)
Q Consensus 147 ~~~~gl~ 153 (165)
.+..|+.
T Consensus 294 l~~~g~~ 300 (488)
T 3dgz_A 294 LEKAGIS 300 (488)
T ss_dssp GGGGTCC
T ss_pred ccccCcE
Confidence 3445554
No 181
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=92.29 E-value=0.067 Score=48.04 Aligned_cols=57 Identities=12% Similarity=0.032 Sum_probs=40.3
Q ss_pred HHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 70 VKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 70 d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
...|.+.+++.||+|+++++|+++.- ++ ..+.... ++ .+.++.||.||+|+|.....
T Consensus 570 ~~~l~~~l~~~GV~i~~~~~V~~i~~--~~--~~v~~~~-----~~-------~~~~i~aD~VV~A~G~~p~~ 626 (690)
T 3k30_A 570 VNRIQRRLIENGVARVTDHAVVAVGA--GG--VTVRDTY-----AS-------IERELECDAVVMVTARLPRE 626 (690)
T ss_dssp HHHHHHHHHHTTCEEEESEEEEEEET--TE--EEEEETT-----TC-------CEEEEECSEEEEESCEEECC
T ss_pred HHHHHHHHHHCCCEEEcCcEEEEEEC--Ce--EEEEEcc-----CC-------eEEEEECCEEEECCCCCCCh
Confidence 45677888899999999999999853 22 1233221 11 13579999999999987654
No 182
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=92.29 E-value=0.32 Score=40.94 Aligned_cols=65 Identities=20% Similarity=0.260 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccchHHH
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLTKSLS 147 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~~l~ 147 (165)
.+.+.+.+..++. |++++++.|.++..+ +++..|.+. +.++.||.||+|+|..... .+.
T Consensus 191 ~~~~~l~~~l~~~-v~i~~~~~v~~i~~~--~~v~~v~~~----------------g~~i~~D~Vv~a~G~~p~~--~l~ 249 (449)
T 3kd9_A 191 EVTDILEEKLKKH-VNLRLQEITMKIEGE--ERVEKVVTD----------------AGEYKAELVILATGIKPNI--ELA 249 (449)
T ss_dssp HHHHHHHHHHTTT-SEEEESCCEEEEECS--SSCCEEEET----------------TEEEECSEEEECSCEEECC--HHH
T ss_pred HHHHHHHHHHHhC-cEEEeCCeEEEEecc--CcEEEEEeC----------------CCEEECCEEEEeeCCccCH--HHH
Confidence 4456667777778 999999999998643 355455443 3589999999999988654 355
Q ss_pred hhcCCC
Q psy9486 148 SRFNLR 153 (165)
Q Consensus 148 ~~~gl~ 153 (165)
+..|+.
T Consensus 250 ~~~gl~ 255 (449)
T 3kd9_A 250 KQLGVR 255 (449)
T ss_dssp HHTTCC
T ss_pred HhCCcc
Confidence 667764
No 183
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=92.18 E-value=0.32 Score=38.25 Aligned_cols=66 Identities=17% Similarity=0.166 Sum_probs=46.3
Q ss_pred HHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccchHHHhhcCCC
Q psy9486 74 GEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLTKSLSSRFNLR 153 (165)
Q Consensus 74 ~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~~l~~~~gl~ 153 (165)
.+++++.||++++++.+.++.-+ +.+.+|.+.+. .+|+ +.++.+|.||+|+|..... .+.+.+++.
T Consensus 196 ~~~l~~~gv~~~~~~~v~~i~~~--~~~~~v~~~~~---~~g~-------~~~~~~D~vv~a~G~~p~~--~~~~~~~~~ 261 (332)
T 3lzw_A 196 VENLHASKVNVLTPFVPAELIGE--DKIEQLVLEEV---KGDR-------KEILEIDDLIVNYGFVSSL--GPIKNWGLD 261 (332)
T ss_dssp HHHHHHSSCEEETTEEEEEEECS--SSCCEEEEEET---TSCC-------EEEEECSEEEECCCEECCC--GGGGGSSCC
T ss_pred HHHHhcCCeEEEeCceeeEEecC--CceEEEEEEec---CCCc-------eEEEECCEEEEeeccCCCc--hHHhhcCcc
Confidence 45578899999999999999764 33566766541 1221 3579999999999987744 345556654
No 184
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=92.09 E-value=0.33 Score=38.43 Aligned_cols=61 Identities=16% Similarity=0.179 Sum_probs=43.3
Q ss_pred HHHHHHH-HHCCCEEecCCceeEEEEcCCC--cEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 71 KWLGEQA-EAMGVEIYPGIPASEVLYHGDG--SVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 71 ~~L~~~A-~~~Gv~i~~~~~v~~i~~~~~g--~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
..+.+++ ++.||+|++++.+.++..+ ++ ++.+|.+.+. .+|+ ..++.+|.||+|+|.....
T Consensus 198 ~~~~~~~~~~~gv~i~~~~~v~~i~~~-~~~~~v~~v~~~~~---~~g~-------~~~i~~D~vi~a~G~~p~~ 261 (333)
T 1vdc_A 198 KIMQQRALSNPKIDVIWNSSVVEAYGD-GERDVLGGLKVKNV---VTGD-------VSDLKVSGLFFAIGHEPAT 261 (333)
T ss_dssp HHHHHHHHTCTTEEEECSEEEEEEEES-SSSSSEEEEEEEET---TTCC-------EEEEECSEEEECSCEEESC
T ss_pred HHHHHHHHhCCCeeEecCCceEEEeCC-CCccceeeEEEEec---CCCc-------eEEEecCEEEEEeCCccch
Confidence 3445444 5689999999999999874 33 7777777531 1232 1479999999999987654
No 185
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=91.86 E-value=0.13 Score=44.08 Aligned_cols=69 Identities=16% Similarity=0.295 Sum_probs=48.5
Q ss_pred HHHHHHHHHHH-HCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccchHH
Q psy9486 68 HVVKWLGEQAE-AMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLTKSL 146 (165)
Q Consensus 68 ~~d~~L~~~A~-~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~~l 146 (165)
....++...++ ..+..|++++.|.+++++ +++++||.... .++ ...+.|+.||+|.|+-. +.+|
T Consensus 211 ~~~~~~~~~~~~r~nl~v~~~~~v~~i~~~-~~~a~gv~~~~----~~~--------~~~~~a~~VILsAGai~--SP~L 275 (526)
T 3t37_A 211 AADAWLTKAVRGRKNLTILTGSRVRRLKLE-GNQVRSLEVVG----RQG--------SAEVFADQIVLCAGALE--SPAL 275 (526)
T ss_dssp HHHHHSCHHHHTCTTEEEECSCEEEEEEEE-TTEEEEEEEEE----TTE--------EEEEEEEEEEECSHHHH--HHHH
T ss_pred cccccccccccCCCCeEEEeCCEEEEEEec-CCeEEEEEEEe----cCc--------eEEEeecceEEcccccC--Ccch
Confidence 44445444433 468999999999999997 78999998875 222 14689999999999644 4455
Q ss_pred HhhcC
Q psy9486 147 SSRFN 151 (165)
Q Consensus 147 ~~~~g 151 (165)
+..-|
T Consensus 276 Ll~SG 280 (526)
T 3t37_A 276 LMRSG 280 (526)
T ss_dssp HHHTT
T ss_pred hhhcc
Confidence 44433
No 186
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=91.77 E-value=0.61 Score=40.95 Aligned_cols=59 Identities=17% Similarity=0.179 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccc
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLT 143 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~ 143 (165)
++-+.+.+..++.|+++++++.+..+... ++.+ -|.+.+ +..+.++.|++|.|......
T Consensus 264 ei~~~l~~~l~~~gi~~~~~~~v~~~~~~-~~~~-~v~~~~---------------~~~~~~D~vLvAvGR~Pnt~ 322 (542)
T 4b1b_A 264 QCAVKVKLYMEEQGVMFKNGILPKKLTKM-DDKI-LVEFSD---------------KTSELYDTVLYAIGRKGDID 322 (542)
T ss_dssp HHHHHHHHHHHHTTCEEEETCCEEEEEEE-TTEE-EEEETT---------------SCEEEESEEEECSCEEESCG
T ss_pred hHHHHHHHHHHhhcceeecceEEEEEEec-CCeE-EEEEcC---------------CCeEEEEEEEEcccccCCcc
Confidence 34556777888899999999999999875 4443 355654 34788999999999887763
No 187
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=91.58 E-value=0.43 Score=39.99 Aligned_cols=50 Identities=12% Similarity=-0.007 Sum_probs=35.9
Q ss_pred CCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 80 MGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 80 ~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
.||+|++++.|+++..+ ++. +.|.+.+. .+|+. .++.||.||+|+|....
T Consensus 329 ~~v~i~~~~~v~~v~~~-~~~-~~v~~~~~---~~g~~-------~~~~~D~Vv~AtG~~p~ 378 (463)
T 3s5w_A 329 PRHAFRCMTTVERATAT-AQG-IELALRDA---GSGEL-------SVETYDAVILATGYERQ 378 (463)
T ss_dssp CCSEEETTEEEEEEEEE-TTE-EEEEEEET---TTCCE-------EEEEESEEEECCCEECC
T ss_pred CCeEEEeCCEEEEEEec-CCE-EEEEEEEc---CCCCe-------EEEECCEEEEeeCCCCC
Confidence 69999999999999875 333 34555431 13322 35999999999998765
No 188
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=91.47 E-value=0.35 Score=41.16 Aligned_cols=72 Identities=11% Similarity=-0.007 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccchHH-
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLTKSL- 146 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~~l- 146 (165)
.+.+.+.+..++.||+|++++.|.++..+ ++ .+.|.+.+. ++ .|.++.||.||+|+|...... -+
T Consensus 227 ~~~~~l~~~l~~~gV~i~~~~~v~~i~~~-~~-~~~v~~~~~----~~-------~g~~~~~D~vv~a~G~~p~~~-~l~ 292 (482)
T 1ojt_A 227 DLVKVWQKQNEYRFDNIMVNTKTVAVEPK-ED-GVYVTFEGA----NA-------PKEPQRYDAVLVAAGRAPNGK-LIS 292 (482)
T ss_dssp HHHHHHHHHHGGGEEEEECSCEEEEEEEE-TT-EEEEEEESS----SC-------CSSCEEESCEEECCCEEECGG-GTT
T ss_pred HHHHHHHHHHHhcCCEEEECCEEEEEEEc-CC-eEEEEEecc----CC-------CceEEEcCEEEECcCCCcCCC-CCC
Confidence 45567778888899999999999999764 33 244555421 11 024688999999999887542 12
Q ss_pred HhhcCCC
Q psy9486 147 SSRFNLR 153 (165)
Q Consensus 147 ~~~~gl~ 153 (165)
.+..|+.
T Consensus 293 ~~~~gl~ 299 (482)
T 1ojt_A 293 AEKAGVA 299 (482)
T ss_dssp GGGTTCC
T ss_pred hhhcCce
Confidence 3445654
No 189
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=91.38 E-value=0.22 Score=42.24 Aligned_cols=59 Identities=17% Similarity=0.229 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 67 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 67 ~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
..+.+++.+..++.||++++++.|+++.. +. +.+... +|+. .++.+|.||+|+|.....
T Consensus 212 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~---~~-v~v~~~------~G~~-------~~i~~D~vv~a~G~~p~~ 270 (458)
T 1lvl_A 212 SELTAPVAESLKKLGIALHLGHSVEGYEN---GC-LLANDG------KGGQ-------LRLEADRVLVAVGRRPRT 270 (458)
T ss_dssp HHHHHHHHHHHHHHTCEEETTCEEEEEET---TE-EEEECS------SSCC-------CEECCSCEEECCCEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEe---CC-EEEEEC------CCce-------EEEECCEEEECcCCCcCC
Confidence 35566778888899999999999999853 33 234321 2321 479999999999988755
No 190
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=91.23 E-value=0.57 Score=40.49 Aligned_cols=60 Identities=12% Similarity=0.141 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
.+-+++.+..++.||+|++++.|+++. +++.+..+... +|+.. +.+|.|+.||.|+|...
T Consensus 273 ~~~~~~~~~L~~~GV~v~~~~~v~~v~--~~~~~~~~~~~------dg~~~-----~~~i~ad~viwa~Gv~~ 332 (502)
T 4g6h_A 273 KLSSYAQSHLENTSIKVHLRTAVAKVE--EKQLLAKTKHE------DGKIT-----EETIPYGTLIWATGNKA 332 (502)
T ss_dssp HHHHHHHHHHHHTTCEEETTEEEEEEC--SSEEEEEEECT------TSCEE-----EEEEECSEEEECCCEEC
T ss_pred HHHHHHHHHHHhcceeeecCceEEEEe--CCceEEEEEec------Ccccc-----eeeeccCEEEEccCCcC
Confidence 344556666778999999999999983 23332322222 34321 24799999999999765
No 191
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=91.15 E-value=0.49 Score=37.37 Aligned_cols=61 Identities=13% Similarity=0.049 Sum_probs=40.0
Q ss_pred EEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 64 VRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 64 i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
++...+.+.+.+++.+.+...+....+..+...+++. .-|.+.+ |.++.+|.||+|+|+..
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~---------------g~~~~a~~liiATGs~p 117 (304)
T 4fk1_A 57 IKPEEFKEIGLNEVMKYPSVHYYEKTVVMITKQSTGL-FEIVTKD---------------HTKYLAERVLLATGMQE 117 (304)
T ss_dssp BCHHHHHHHHHHHHTTSTTEEEEECCEEEEEECTTSC-EEEEETT---------------CCEEEEEEEEECCCCEE
T ss_pred CCHHHHHHHHHHHHHhcCCEEEEeeEEEEeeecCCCc-EEEEECC---------------CCEEEeCEEEEccCCcc
Confidence 4455666666777777665555555666665543443 3355554 46899999999999764
No 192
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=91.07 E-value=0.44 Score=40.23 Aligned_cols=61 Identities=11% Similarity=0.075 Sum_probs=44.7
Q ss_pred HHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccchHHHhh
Q psy9486 70 VKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLTKSLSSR 149 (165)
Q Consensus 70 d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~~l~~~ 149 (165)
-+.+.+..++.||++++++.|+++. .. .|.+.+ |.++.+|.||.|.|..... .+.+.
T Consensus 191 ~~~~~~~l~~~gV~i~~~~~v~~~~---~~---~v~~~~---------------g~~~~~D~vl~a~G~~Pn~--~~~~~ 247 (437)
T 4eqs_A 191 NQPILDELDKREIPYRLNEEINAIN---GN---EITFKS---------------GKVEHYDMIIEGVGTHPNS--KFIES 247 (437)
T ss_dssp GHHHHHHHHHTTCCEEESCCEEEEE---TT---EEEETT---------------SCEEECSEEEECCCEEESC--GGGTT
T ss_pred HHHHHHHhhccceEEEeccEEEEec---CC---eeeecC---------------CeEEeeeeEEEEeceecCc--HHHHh
Confidence 4567777888999999999998873 22 345554 4689999999999987644 35555
Q ss_pred cCCC
Q psy9486 150 FNLR 153 (165)
Q Consensus 150 ~gl~ 153 (165)
.|+.
T Consensus 248 ~gl~ 251 (437)
T 4eqs_A 248 SNIK 251 (437)
T ss_dssp SSCC
T ss_pred hhhh
Confidence 6764
No 193
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=90.97 E-value=0.4 Score=39.93 Aligned_cols=48 Identities=13% Similarity=0.126 Sum_probs=36.7
Q ss_pred HHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 74 GEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 74 ~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
.+..++.|++++++++|+++..+ +. -|.+.+ |.++.+|.+|+|+|+..
T Consensus 69 ~~~~~~~~i~~~~~~~V~~id~~-~~---~v~~~~---------------g~~~~yd~lvlAtG~~p 116 (385)
T 3klj_A 69 NDWYEKNNIKVITSEFATSIDPN-NK---LVTLKS---------------GEKIKYEKLIIASGSIA 116 (385)
T ss_dssp HHHHHHTTCEEECSCCEEEEETT-TT---EEEETT---------------SCEEECSEEEECCCEEE
T ss_pred HHHHHHCCCEEEeCCEEEEEECC-CC---EEEECC---------------CCEEECCEEEEecCCCc
Confidence 44456789999999999999764 33 355554 45899999999999754
No 194
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=90.62 E-value=0.41 Score=37.27 Aligned_cols=60 Identities=18% Similarity=0.104 Sum_probs=44.6
Q ss_pred EEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCC-CcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 63 VVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGD-GSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 63 ~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~-g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
.++...+..++.+.+++.|++++.+ +|.++ .+++ +.+ -|.... .+ ++.++.+|+|+|...
T Consensus 58 ~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i-~~~~~~~~-~v~~~~--------------~~-~~~~d~lvlAtG~~~ 118 (315)
T 3r9u_A 58 VMDGISFMAPWSEQCMRFGLKHEMV-GVEQI-LKNSDGSF-TIKLEG--------------GK-TELAKAVIVCTGSAP 118 (315)
T ss_dssp CBCHHHHHHHHHHHHTTTCCEEECC-CEEEE-EECTTSCE-EEEETT--------------SC-EEEEEEEEECCCEEE
T ss_pred CCCHHHHHHHHHHHHHHcCcEEEEE-EEEEE-ecCCCCcE-EEEEec--------------CC-EEEeCEEEEeeCCCC
Confidence 3567889999999999999999988 89999 7521 332 222322 13 799999999999754
No 195
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=90.21 E-value=0.45 Score=41.17 Aligned_cols=60 Identities=17% Similarity=0.151 Sum_probs=44.6
Q ss_pred HHHHHHHHH-CCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 71 KWLGEQAEA-MGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 71 ~~L~~~A~~-~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
..+.++.++ .||++++++.++++.-+ ++++.+|.+.+. .+|+. .++.++.||+|.|....
T Consensus 394 ~~l~~~l~~~~gV~v~~~~~v~~i~~~-~~~v~~v~~~~~---~~g~~-------~~i~~D~vi~a~G~~pn 454 (521)
T 1hyu_A 394 QVLQDKVRSLKNVDIILNAQTTEVKGD-GSKVVGLEYRDR---VSGDI-------HSVALAGIFVQIGLLPN 454 (521)
T ss_dssp HHHHHHHTTCTTEEEECSEEEEEEEEC-SSSEEEEEEEET---TTCCE-------EEEECSEEEECCCEEES
T ss_pred HHHHHHHhcCCCcEEEeCCEEEEEEcC-CCcEEEEEEEeC---CCCce-------EEEEcCEEEECcCCCCC
Confidence 456666777 59999999999999764 578888887641 12321 36999999999997653
No 196
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=89.83 E-value=1 Score=38.51 Aligned_cols=61 Identities=10% Similarity=0.107 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
.+-+.+.+..++. |+|++++.|+++..+ ++.+. |.+.+ .+|+. .++.+|.||+|+|.....
T Consensus 216 ~~~~~l~~~l~~~-V~i~~~~~v~~i~~~-~~~v~-v~~~~----~~G~~-------~~i~~D~Vi~a~G~~p~~ 276 (492)
T 3ic9_A 216 EMKRYAEKTFNEE-FYFDAKARVISTIEK-EDAVE-VIYFD----KSGQK-------TTESFQYVLAATGRKANV 276 (492)
T ss_dssp HHHHHHHHHHHTT-SEEETTCEEEEEEEC-SSSEE-EEEEC----TTCCE-------EEEEESEEEECSCCEESC
T ss_pred HHHHHHHHHHhhC-cEEEECCEEEEEEEc-CCEEE-EEEEe----CCCce-------EEEECCEEEEeeCCccCC
Confidence 4555666666666 999999999999875 45544 44432 13321 479999999999987654
No 197
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=89.63 E-value=0.24 Score=41.82 Aligned_cols=52 Identities=10% Similarity=0.030 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEccc
Q psy9486 67 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEG 137 (165)
Q Consensus 67 ~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G 137 (165)
..+.+.|++.+++.|++|.++++|++|..+ +++ |.+.+ |.++.|+.||.+.-
T Consensus 222 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~-~~~---v~~~~---------------G~~~~ad~vI~t~P 273 (513)
T 4gde_A 222 GGIWIAVANTLPKEKTRFGEKGKVTKVNAN-NKT---VTLQD---------------GTTIGYKKLVSTMA 273 (513)
T ss_dssp HHHHHHHHHTSCGGGEEESGGGCEEEEETT-TTE---EEETT---------------SCEEEEEEEEECSC
T ss_pred HHHHHHHHHHHHhcCeeeecceEEEEEEcc-CCE---EEEcC---------------CCEEECCEEEECCC
Confidence 456777888888899999999999999875 443 44554 46899999997654
No 198
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=89.44 E-value=0.65 Score=39.72 Aligned_cols=55 Identities=9% Similarity=-0.015 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHCC-CEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCC
Q psy9486 69 VVKWLGEQAEAMG-VEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 139 (165)
Q Consensus 69 ~d~~L~~~A~~~G-v~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~ 139 (165)
+...+..-++.++ ++|+++++|++|..+ ++..+.|.+.+ |..+.||.||.|.+..
T Consensus 201 ~~~l~~~l~~~l~~~~i~~~~~V~~I~~~-~~~~v~v~~~~---------------g~~~~ad~VI~t~p~~ 256 (516)
T 1rsg_A 201 YDSVVQRIAQSFPQNWLKLSCEVKSITRE-PSKNVTVNCED---------------GTVYNADYVIITVPQS 256 (516)
T ss_dssp HHHHHHHHHTTSCGGGEETTCCEEEEEEC-TTSCEEEEETT---------------SCEEEEEEEEECCCHH
T ss_pred HHHHHHHHHHhCCCCEEEECCEEEEEEEc-CCCeEEEEECC---------------CcEEECCEEEECCCHH
Confidence 4444333444443 679999999999885 23335677765 4579999999999854
No 199
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=89.34 E-value=0.74 Score=38.77 Aligned_cols=50 Identities=16% Similarity=0.165 Sum_probs=35.1
Q ss_pred HHHHCC-CEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCC
Q psy9486 76 QAEAMG-VEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 139 (165)
Q Consensus 76 ~A~~~G-v~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~ 139 (165)
-+++++ ++|+++++|++|..+ +++|. |.+.+ |.. ...++||.||+|....
T Consensus 245 l~~~l~~~~i~~~~~V~~i~~~-~~~v~-v~~~~------g~~------~~~~~ad~vI~a~p~~ 295 (489)
T 2jae_A 245 FQDRIGTDNIVFGAEVTSMKNV-SEGVT-VEYTA------GGS------KKSITADYAICTIPPH 295 (489)
T ss_dssp HHHHHCGGGEETTCEEEEEEEE-TTEEE-EEEEE------TTE------EEEEEESEEEECSCHH
T ss_pred HHHhcCCCeEEECCEEEEEEEc-CCeEE-EEEec------CCe------EEEEECCEEEECCCHH
Confidence 334455 889999999999986 45544 55543 100 1479999999999865
No 200
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=89.24 E-value=0.42 Score=40.16 Aligned_cols=49 Identities=14% Similarity=0.220 Sum_probs=36.6
Q ss_pred HHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 75 EQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 75 ~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
+.+++.|++++.++.|+.+..+ ++ .|.+.+ |.++.++.+|+|+|.+...
T Consensus 68 ~~~~~~gv~~~~~~~v~~i~~~--~~--~v~~~~---------------g~~~~~d~lviAtG~~p~~ 116 (431)
T 1q1r_A 68 DAYAAQNIQLLGGTQVTAINRD--RQ--QVILSD---------------GRALDYDRLVLATGGRPRP 116 (431)
T ss_dssp HHHHHTTEEEECSCCEEEEETT--TT--EEEETT---------------SCEEECSEEEECCCEEECC
T ss_pred HHHHhCCCEEEeCCEEEEEECC--CC--EEEECC---------------CCEEECCEEEEcCCCCccC
Confidence 3446789999999999998653 33 355543 3579999999999987643
No 201
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=89.17 E-value=0.29 Score=40.19 Aligned_cols=67 Identities=18% Similarity=0.115 Sum_probs=47.4
Q ss_pred HHHHHHHHHHH----HHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 67 GHVVKWLGEQA----EAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 67 ~~~d~~L~~~A----~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
..|+..+.+.+ ++.|+++++++.+..+..+.++ ..|.+.+ |.++.++.||.|.|...
T Consensus 198 ~~~~~~~~~~~~~~l~~~gi~v~~~~~v~~v~~~~~~--~~v~~~~---------------g~~i~~D~vi~~~g~~~-- 258 (401)
T 3vrd_B 198 AQFTKGWERLYGFGTENALIEWHPGPDAAVVKTDTEA--MTVETSF---------------GETFKAAVINLIPPQRA-- 258 (401)
T ss_dssp HHHHHHHHHHSCTTSTTCSEEEECTTTTCEEEEETTT--TEEEETT---------------SCEEECSEEEECCCEEE--
T ss_pred ccccHHHHHHHHHHHHhcCcEEEeCceEEEEEecccc--eEEEcCC---------------CcEEEeeEEEEecCcCC--
Confidence 44565555544 4679999999999988775333 2466665 56899999999999765
Q ss_pred chHHHhhcCCC
Q psy9486 143 TKSLSSRFNLR 153 (165)
Q Consensus 143 ~~~l~~~~gl~ 153 (165)
..+.+..+|.
T Consensus 259 -~~~~~~~gl~ 268 (401)
T 3vrd_B 259 -GKIAQSASLT 268 (401)
T ss_dssp -CHHHHHTTCC
T ss_pred -chhHhhcccc
Confidence 3556666763
No 202
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=88.67 E-value=0.67 Score=39.06 Aligned_cols=56 Identities=14% Similarity=0.061 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 69 VVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 69 ~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
+.+.+.+.+++.|++++.++.+. .+ .+. +-|.+.+ |+. .++.++.+|+|+|+++..
T Consensus 93 l~~~l~~~~~~~gv~~~~g~~~~---id-~~~-v~V~~~~------G~~-------~~~~~d~lViAtG~~~~~ 148 (464)
T 2a8x_A 93 RVAGVHFLMKKNKITEIHGYGTF---AD-ANT-LLVDLND------GGT-------ESVTFDNAIIATGSSTRL 148 (464)
T ss_dssp HHHHHHHHHHHTTCEEECEEEEE---SS-SSE-EEEEETT------SCC-------EEEEEEEEEECCCEEECC
T ss_pred HHHHHHHHHHhCCCEEEEeEEEE---ec-CCe-EEEEeCC------Cce-------EEEEcCEEEECCCCCCCC
Confidence 44556777888999999887543 33 333 3354433 211 479999999999987644
No 203
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=88.42 E-value=1.8 Score=37.33 Aligned_cols=65 Identities=14% Similarity=0.189 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEcCC---CcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 67 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHGD---GSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 67 ~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~---g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
..+.+.+.+..++.||+|++++.++++...++ +.+ .|.... .+|... .++.+|.||+|+|.....
T Consensus 250 ~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~-~v~~~~----~~g~~~------~~~~~D~vi~a~G~~p~~ 317 (519)
T 3qfa_A 250 QDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRL-RVVAQS----TNSEEI------IEGEYNTVMLAIGRDACT 317 (519)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEE-EEEEEE----SSSSCE------EEEEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceE-EEEEEE----CCCcEE------EEEECCEEEEecCCcccC
Confidence 35666777888899999999998888865322 322 233322 123110 357899999999987644
No 204
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=88.17 E-value=0.82 Score=41.95 Aligned_cols=42 Identities=21% Similarity=0.308 Sum_probs=33.4
Q ss_pred CCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccC
Q psy9486 80 MGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGC 138 (165)
Q Consensus 80 ~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~ 138 (165)
.|++|+++++|++|..+ ++.|. |.+.+ |..+.|+.||+|...
T Consensus 542 ~gl~I~l~t~V~~I~~~-~~~v~-V~~~~---------------G~~i~Ad~VIvA~P~ 583 (776)
T 4gut_A 542 EGLDIQLKSPVQCIDYS-GDEVQ-VTTTD---------------GTGYSAQKVLVTVPL 583 (776)
T ss_dssp TTSCEESSCCEEEEECS-SSSEE-EEETT---------------CCEEEESEEEECCCH
T ss_pred hCCcEEcCCeeEEEEEc-CCEEE-EEECC---------------CcEEEcCEEEECCCH
Confidence 48999999999999886 44444 66654 457999999999964
No 205
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=87.98 E-value=1.2 Score=35.51 Aligned_cols=55 Identities=18% Similarity=0.327 Sum_probs=38.8
Q ss_pred HHHHHHHHHCC-CEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEE-cCEEEEcccCCccc
Q psy9486 71 KWLGEQAEAMG-VEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELH-AKVTIFAEGCHGHL 142 (165)
Q Consensus 71 ~~L~~~A~~~G-v~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~-Ak~VI~A~G~~s~l 142 (165)
+++.+..++.| |++++++.|.++..+ ++. ..|.+.+ | ..+. ++.||.|+|.....
T Consensus 218 ~~l~~~l~~~g~v~~~~~~~v~~i~~~-~~~-~~v~~~~------g---------~~~~~~d~vi~a~G~~~~~ 274 (369)
T 3d1c_A 218 QRLGNVIKQGARIEMNVHYTVKDIDFN-NGQ-YHISFDS------G---------QSVHTPHEPILATGFDATK 274 (369)
T ss_dssp HHHHHHHHTTCCEEEECSCCEEEEEEE-TTE-EEEEESS------S---------CCEEESSCCEECCCBCGGG
T ss_pred HHHHHHHhhCCcEEEecCcEEEEEEec-CCc-eEEEecC------C---------eEeccCCceEEeeccCCcc
Confidence 55566667786 999999999999764 332 3455543 3 3454 59999999988754
No 206
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=87.83 E-value=0.88 Score=38.29 Aligned_cols=55 Identities=15% Similarity=0.077 Sum_probs=35.6
Q ss_pred HHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 70 VKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 70 d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
...+.+.+++.|++++.++.+. .+ .+. +-|.+.+ |.. .++.++.+|+|+|.++..
T Consensus 99 ~~~~~~~~~~~gv~~~~g~~~~---~~-~~~-~~v~~~~------G~~-------~~i~~d~lIiAtGs~p~~ 153 (470)
T 1dxl_A 99 TRGIEGLFKKNKVTYVKGYGKF---VS-PSE-ISVDTIE------GEN-------TVVKGKHIIIATGSDVKS 153 (470)
T ss_dssp HHHHHHHHHHHTCEEEESCEEE---EE-TTE-EEECCSS------SCC-------EEEECSEEEECCCEEECC
T ss_pred HHHHHHHHHhCCCEEEEeEEEE---ec-CCE-EEEEeCC------Cce-------EEEEcCEEEECCCCCCCC
Confidence 3345666777899999998653 33 232 2233322 211 479999999999987654
No 207
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=87.23 E-value=1 Score=37.51 Aligned_cols=55 Identities=15% Similarity=0.274 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 69 VVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 69 ~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
+...+.+..++.||++++++.|+++. .+ +|.+.+. ++ .+.++.+|.||.|.|..+
T Consensus 202 ~~~~l~~~l~~~GV~i~~~~~v~~v~---~~---~v~~~~~----~~-------~g~~i~~D~vv~a~G~~~ 256 (430)
T 3h28_A 202 SKRLVEDLFAERNIDWIANVAVKAIE---PD---KVIYEDL----NG-------NTHEVPAKFTMFMPSFQG 256 (430)
T ss_dssp HHHHHHHHHHHTTCEEECSCEEEEEC---SS---EEEEECT----TS-------CEEEEECSEEEEECEEEC
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEe---CC---eEEEEec----CC-------CceEEeeeEEEECCCCcc
Confidence 45677788889999999999999983 23 2333321 11 135899999999999765
No 208
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=87.10 E-value=2.3 Score=33.09 Aligned_cols=60 Identities=20% Similarity=0.227 Sum_probs=42.7
Q ss_pred EEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 63 VVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 63 ~i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
.++..++...+.+.+++.++++...+ +.....+. .. .-+.+.+ +.++.++.+|+|+|+..
T Consensus 62 ~i~~~~l~~~~~~~~~~~~~~~~~~~-v~~~~~~~-~~-~~~~~~~---------------~~~~~~~~liiATG~~~ 121 (314)
T 4a5l_A 62 GIDGNELMMNMRTQSEKYGTTIITET-IDHVDFST-QP-FKLFTEE---------------GKEVLTKSVIIATGATA 121 (314)
T ss_dssp CEEHHHHHHHHHHHHHHTTCEEECCC-EEEEECSS-SS-EEEEETT---------------CCEEEEEEEEECCCEEE
T ss_pred cCCHHHHHHHHHHHHhhcCcEEEEeE-EEEeecCC-Cc-eEEEECC---------------CeEEEEeEEEEcccccc
Confidence 36777888888999999999998654 55554432 22 2344443 35899999999999764
No 209
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=87.02 E-value=0.53 Score=40.12 Aligned_cols=70 Identities=23% Similarity=0.197 Sum_probs=43.8
Q ss_pred HHHHHHHHHH------CCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCC--CCCCCCcC--eEEEcCEEEEcccCC
Q psy9486 70 VKWLGEQAEA------MGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGS--PKDTFARG--MELHAKVTIFAEGCH 139 (165)
Q Consensus 70 d~~L~~~A~~------~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~--~~~~~~~g--~~i~Ak~VI~A~G~~ 139 (165)
.+.|.+.+++ .|++|++++.+.++.- +++|.+|++.++-.+.++. .. .-..| .++.|+.||.|.|..
T Consensus 249 ~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~--~~~v~~v~~~~~~~~~~~~~~~~-~~~~g~~~~i~~d~vi~a~G~~ 325 (456)
T 1lqt_A 249 IKVLRGYADREPRPGHRRMVFRFLTSPIEIKG--KRKVERIVLGRNELVSDGSGRVA-AKDTGEREELPAQLVVRSVGYR 325 (456)
T ss_dssp HHHHHHHHTCC-CTTSEEEEEECSEEEEEEEC--SSSCCEEEEEEEEEEECSSSSEE-EEEEEEEEEEECSEEEECSCEE
T ss_pred HHHHHHHhhcCCCCCCceEEEEeCCCCeEEec--CCcEeEEEEEEEEecCCCccccc-ccCCCceEEEEcCEEEEccccc
Confidence 4566666766 7999999999999864 3666677665310000100 00 00002 369999999999988
Q ss_pred ccc
Q psy9486 140 GHL 142 (165)
Q Consensus 140 s~l 142 (165)
+..
T Consensus 326 p~~ 328 (456)
T 1lqt_A 326 GVP 328 (456)
T ss_dssp CCC
T ss_pred cCC
Confidence 754
No 210
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=86.66 E-value=0.61 Score=40.77 Aligned_cols=45 Identities=29% Similarity=0.369 Sum_probs=34.2
Q ss_pred HHHHHHCCCEEec--CCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 74 GEQAEAMGVEIYP--GIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 74 ~~~A~~~Gv~i~~--~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
++...+.+|++.. .+.|++|.- + ||++.+ | ++.+|+||.|||-..
T Consensus 345 ~~al~~~nV~lv~~~~~~I~~it~--~----gv~~~d---------------G-~~~~D~IV~ATGf~~ 391 (545)
T 3uox_A 345 YETYNRDNVHLVDIREAPIQEVTP--E----GIKTAD---------------A-AYDLDVIIYATGFDA 391 (545)
T ss_dssp HHHTTSTTEEEEETTTSCEEEEET--T----EEEESS---------------C-EEECSEEEECCCCBS
T ss_pred HHHhcCCCEEEEecCCCCceEEcc--C----eEEeCC---------------C-eeecCEEEECCcccc
Confidence 4444456899985 678888742 2 788876 6 899999999999885
No 211
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=86.66 E-value=1.5 Score=37.09 Aligned_cols=59 Identities=20% Similarity=0.264 Sum_probs=40.6
Q ss_pred CCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccchHH-HhhcCCC
Q psy9486 81 GVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLTKSL-SSRFNLR 153 (165)
Q Consensus 81 Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~~l-~~~~gl~ 153 (165)
.|+|+++++|+++..++++.+. |.+.+ .+|+. .++.||.||+|+|...... | .+..|+.
T Consensus 225 ~v~i~~~~~v~~i~~~~~~~v~-v~~~~----~~G~~-------~~i~~D~vi~a~G~~p~~~--l~l~~~gl~ 284 (466)
T 3l8k_A 225 KLNIKFNSPVTEVKKIKDDEYE-VIYST----KDGSK-------KSIFTNSVVLAAGRRPVIP--EGAREIGLS 284 (466)
T ss_dssp CCCEECSCCEEEEEEEETTEEE-EEECC----TTSCC-------EEEEESCEEECCCEEECCC--TTTGGGTCC
T ss_pred EEEEEECCEEEEEEEcCCCcEE-EEEEe----cCCce-------EEEEcCEEEECcCCCcccc--cchhhcCce
Confidence 4999999999999775314443 55542 13322 3799999999999887664 4 4556664
No 212
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=86.55 E-value=1.3 Score=37.15 Aligned_cols=54 Identities=19% Similarity=0.129 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcC-eEEEcCEEEEcccCCccc
Q psy9486 69 VVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARG-MELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 69 ~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g-~~i~Ak~VI~A~G~~s~l 142 (165)
+.+.+.+.+++.|++++.++.+. .+ .+. +-|.+.+ | .++.++.+|+|+|.+...
T Consensus 93 l~~~~~~~~~~~gv~~~~g~~~~---id-~~~-v~V~~~~---------------G~~~i~~d~lViATGs~p~~ 147 (455)
T 1ebd_A 93 LTGGVEGLLKGNKVEIVKGEAYF---VD-ANT-VRVVNGD---------------SAQTYTFKNAIIATGSRPIE 147 (455)
T ss_dssp HHHHHHHHHHTTTCEEEESEEEE---EE-TTE-EEEEETT---------------EEEEEECSEEEECCCEEECC
T ss_pred HHHHHHHHHHhCCCEEEEEEEEE---cc-CCe-EEEEeCC---------------CcEEEEeCEEEEecCCCCCC
Confidence 33445667778999999987553 33 333 3355543 2 479999999999987643
No 213
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=86.55 E-value=0.82 Score=38.63 Aligned_cols=51 Identities=22% Similarity=0.148 Sum_probs=33.6
Q ss_pred HHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeE------EEcCEEEEcccCCc
Q psy9486 72 WLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGME------LHAKVTIFAEGCHG 140 (165)
Q Consensus 72 ~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~------i~Ak~VI~A~G~~s 140 (165)
.+.+.+++.||+++.++.+.. + .+. +.|.+.+ |.. .+ +.++.||+|+|+++
T Consensus 101 ~~~~~~~~~gv~~~~g~~~~~---~-~~~-v~V~~~~------G~~-------~~~~~~~~i~~d~lViAtGs~p 157 (478)
T 1v59_A 101 GIELLFKKNKVTYYKGNGSFE---D-ETK-IRVTPVD------GLE-------GTVKEDHILDVKNIIVATGSEV 157 (478)
T ss_dssp HHHHHHHHTTCEEEESEEEES---S-SSE-EEEECCT------TCT-------TCCSSCEEEEEEEEEECCCEEE
T ss_pred HHHHHHHhCCCEEEEEEEEEc---c-CCe-EEEEecC------CCc-------ccccccceEEeCEEEECcCCCC
Confidence 355667789999999876541 3 333 3344432 210 24 99999999999876
No 214
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=86.13 E-value=1.3 Score=34.89 Aligned_cols=64 Identities=5% Similarity=0.063 Sum_probs=44.1
Q ss_pred HHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccchHHHhhc
Q psy9486 71 KWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLTKSLSSRF 150 (165)
Q Consensus 71 ~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~~l~~~~ 150 (165)
..+.++.++.|+.++..+ +..+..+ ++++.+|++.+ |.++.++.+|++.|..... .+.+++
T Consensus 184 ~~~~~~l~~~g~~~~~~~-v~~~~~~-~~~~~~v~~~~---------------g~~i~~~~~vi~~g~~~~~--~~~~~~ 244 (304)
T 4fk1_A 184 QTIMDELSNKNIPVITES-IRTLQGE-GGYLKKVEFHS---------------GLRIERAGGFIVPTFFRPN--QFIEQL 244 (304)
T ss_dssp HHHHHHHHTTTCCEECSC-EEEEESG-GGCCCEEEETT---------------SCEECCCEEEECCEEECSS--CHHHHT
T ss_pred hhhhhhhhccceeEeeee-EEEeecC-CCeeeeeeccc---------------cceeeecceeeeeccccCC--hhhhhc
Confidence 345566677899988764 6666554 67788888875 4678888888888765543 355667
Q ss_pred CCC
Q psy9486 151 NLR 153 (165)
Q Consensus 151 gl~ 153 (165)
|+.
T Consensus 245 g~~ 247 (304)
T 4fk1_A 245 GCE 247 (304)
T ss_dssp TCC
T ss_pred CeE
Confidence 764
No 215
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=85.76 E-value=1.6 Score=36.57 Aligned_cols=54 Identities=17% Similarity=0.275 Sum_probs=38.4
Q ss_pred HHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 70 VKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 70 d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
-+++.+..++.||++++++.|+++. .+++ ...+ .+|+ +.++.||.||.|.|..+
T Consensus 203 ~~~l~~~l~~~GV~~~~~~~v~~v~---~~~~---~~~~----~~g~-------~~~i~~d~vi~~~G~~~ 256 (430)
T 3hyw_A 203 KRLVEDLFAERNIDWIANVAVKAIE---PDKV---IYED----LNGN-------THEVPAKFTMFMPSFQG 256 (430)
T ss_dssp HHHHHHHHHHTTCEEECSCEEEEEC---SSEE---EEEC----TTSC-------EEEEECSEEEEECEEEC
T ss_pred HHHHHHHHHhCCeEEEeCceEEEEe---CCce---EEEe----eCCC-------ceEeecceEEEeccCCC
Confidence 4456667788999999999999982 3432 2222 2232 35899999999999775
No 216
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=85.57 E-value=1 Score=38.28 Aligned_cols=58 Identities=19% Similarity=0.110 Sum_probs=34.5
Q ss_pred HHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccc-----cCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 72 WLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGI-----AKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 72 ~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~-----~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
.+.+.+++.|++++.++.+. .+ ++. +-|.+.+ |. ..+|+. .+++++.+|+|+|+++..
T Consensus 100 ~~~~~~~~~gv~~~~g~~~~---~~-~~~-v~v~~~~-g~~~~~~~~~g~~-------~~i~ad~lViAtGs~p~~ 162 (482)
T 1ojt_A 100 GLAGMAKSRKVDVIQGDGQF---LD-PHH-LEVSLTA-GDAYEQAAPTGEK-------KIVAFKNCIIAAGSRVTK 162 (482)
T ss_dssp HHHHHHHHTTCEEEEEEEEE---EE-TTE-EEEEEEE-EEETTEEEEEEEE-------EEEEEEEEEECCCEEECC
T ss_pred HHHHHHHhCCcEEEeeEEEE---cc-CCE-EEEEecC-CcccccccccCcc-------eEEEcCEEEECCCCCCCC
Confidence 35566778999999887554 33 333 2343322 00 000100 369999999999988643
No 217
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=85.53 E-value=1.4 Score=41.23 Aligned_cols=60 Identities=22% Similarity=0.297 Sum_probs=43.1
Q ss_pred HHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccC---CCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 74 GEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAK---DGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 74 ~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~---~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
.+++++.||+|++++.+.++.-++++++.+|.+.+. +. +|+ ..++.+|.||+|.|.....
T Consensus 323 ~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~--~~~~~~G~-------~~~i~~D~Vv~a~G~~P~~ 385 (965)
T 2gag_A 323 AAQAVADGVQVISGSVVVDTEADENGELSAIVVAEL--DEARELGG-------TQRFEADVLAVAGGFNPVV 385 (965)
T ss_dssp HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEE--CTTCCEEE-------EEEEECSEEEEECCEEECC
T ss_pred HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEec--cccCCCCc-------eEEEEcCEEEECCCcCcCh
Confidence 456788999999999999997632467778776531 00 111 1479999999999987654
No 218
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=85.04 E-value=0.29 Score=41.14 Aligned_cols=53 Identities=13% Similarity=0.044 Sum_probs=39.2
Q ss_pred cEEEEhHHHHHHHHHHHHHCCCEEecCC-ceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCC
Q psy9486 61 NYVVRLGHVVKWLGEQAEAMGVEIYPGI-PASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 139 (165)
Q Consensus 61 ~~~i~r~~~d~~L~~~A~~~Gv~i~~~~-~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~ 139 (165)
++.+.+..++.+|.+++++.|++++... .+.++ .. ....++.||+|+|.+
T Consensus 116 ~~~v~~~~l~~~L~~~~~~~Gv~v~~~~v~~~~l-------------~~----------------~~~~ad~VV~AdG~~ 166 (430)
T 3ihm_A 116 SRAVDYRLYQPMLMRALEARGGKFCYDAVSAEDL-------------EG----------------LSEQYDLLVVCTGKY 166 (430)
T ss_dssp EBEECHHHHHHHHHHHHHHTTCEEEECCCCGGGH-------------HH----------------HHTTSSEEEECCCCT
T ss_pred ceeecHHHHHHHHHHHHHHcCCEEEEEecchhhh-------------hh----------------hcccCCEEEECCCCc
Confidence 5889999999999999999999997632 11111 00 112579999999999
Q ss_pred ccc
Q psy9486 140 GHL 142 (165)
Q Consensus 140 s~l 142 (165)
|.+
T Consensus 167 S~~ 169 (430)
T 3ihm_A 167 ALG 169 (430)
T ss_dssp TGG
T ss_pred chH
Confidence 866
No 219
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=84.55 E-value=0.83 Score=36.38 Aligned_cols=59 Identities=15% Similarity=0.138 Sum_probs=40.3
Q ss_pred HHHHHH-HHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 72 WLGEQA-EAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 72 ~L~~~A-~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
.+.++. ++.||++++++.+.++..+ +++.+|.+.+. .+|+ ..++.+|.||+|+|.....
T Consensus 195 ~~~~~~~~~~gV~v~~~~~v~~i~~~--~~~~~v~~~~~---~~g~-------~~~i~~D~vi~a~G~~p~~ 254 (335)
T 2a87_A 195 IMLDRARNNDKIRFLTNHTVVAVDGD--TTVTGLRVRDT---NTGA-------ETTLPVTGVFVAIGHEPRS 254 (335)
T ss_dssp THHHHHHHCTTEEEECSEEEEEEECS--SSCCEEEEEEE---TTSC-------CEEECCSCEEECSCEEECC
T ss_pred HHHHHHhccCCcEEEeCceeEEEecC--CcEeEEEEEEc---CCCc-------eEEeecCEEEEccCCccCh
Confidence 344343 4689999999999999653 45556666431 1232 1479999999999977543
No 220
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=84.02 E-value=1.5 Score=37.37 Aligned_cols=52 Identities=23% Similarity=0.359 Sum_probs=35.4
Q ss_pred HHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 74 GEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 74 ~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
.+.+++.|++++.+++|..+..+ ++. +-|.. + | .+.++.++.+|+|+|.+..
T Consensus 99 ~~~~~~~gv~v~~~~~v~~i~~~-~~~-v~v~~-~------g-------~~~~~~~d~lviAtG~~p~ 150 (490)
T 2bc0_A 99 KEELESLGAKVYMESPVQSIDYD-AKT-VTALV-D------G-------KNHVETYDKLIFATGSQPI 150 (490)
T ss_dssp HHHHHHTTCEEETTCCEEEEETT-TTE-EEEEE-T------T-------EEEEEECSEEEECCCEEEC
T ss_pred HHHHHhCCCEEEeCCEEEEEECC-CCE-EEEEe-C------C-------cEEEEECCEEEECCCCCcC
Confidence 34456789999999999998653 333 22331 1 1 0247999999999997653
No 221
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=82.89 E-value=4.4 Score=35.27 Aligned_cols=63 Identities=22% Similarity=0.270 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEc-----CC---CcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCC
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYH-----GD---GSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 139 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~-----~~---g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~ 139 (165)
.+...+.+..++.||++++++.+.++... ++ +++. |.... .+|+. .++.+|.||+|.|..
T Consensus 327 ~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~-v~~~~----~~g~~-------~~~~~D~vi~a~G~~ 394 (598)
T 2x8g_A 327 QMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLL-VKGHY----TDGKK-------FEEEFETVIFAVGRE 394 (598)
T ss_dssp HHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEE-EEEEE----TTSCE-------EEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEE-EEEEe----CCCcE-------EeccCCEEEEEeCCc
Confidence 45556677778899999999988887531 12 3332 22211 12321 134599999999987
Q ss_pred ccc
Q psy9486 140 GHL 142 (165)
Q Consensus 140 s~l 142 (165)
...
T Consensus 395 p~~ 397 (598)
T 2x8g_A 395 PQL 397 (598)
T ss_dssp ECG
T ss_pred ccc
Confidence 654
No 222
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=82.58 E-value=1.6 Score=36.40 Aligned_cols=54 Identities=17% Similarity=0.191 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
.+...|.+.+++.||+++. .+|+.+..+ ++ .|.+.+ |.++.+|.+|+|+|+...
T Consensus 60 ~~~~~l~~~~~~~gv~~~~-~~v~~id~~--~~--~V~~~~---------------g~~i~~d~lviAtG~~~~ 113 (437)
T 3sx6_A 60 DIAFPIRHYVERKGIHFIA-QSAEQIDAE--AQ--NITLAD---------------GNTVHYDYLMIATGPKLA 113 (437)
T ss_dssp HHEEECHHHHHTTTCEEEC-SCEEEEETT--TT--EEEETT---------------SCEEECSEEEECCCCEEC
T ss_pred HHHHHHHHHHHHCCCEEEE-eEEEEEEcC--CC--EEEECC---------------CCEEECCEEEECCCCCcC
Confidence 3444466777789999985 588888653 33 355554 357999999999998654
No 223
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=82.30 E-value=1.1 Score=37.29 Aligned_cols=47 Identities=23% Similarity=0.220 Sum_probs=34.9
Q ss_pred HHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 76 QAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 76 ~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
.+++.|++++.+++|+.+..+ ++ .|.+.+ |.++.++.+|+|+|+...
T Consensus 68 ~~~~~~v~~~~~~~v~~i~~~--~~--~v~~~~---------------g~~~~~d~lviAtG~~~~ 114 (408)
T 2gqw_A 68 CKRAPEVEWLLGVTAQSFDPQ--AH--TVALSD---------------GRTLPYGTLVLATGAAPR 114 (408)
T ss_dssp CTTSCSCEEEETCCEEEEETT--TT--EEEETT---------------SCEEECSEEEECCCEEEC
T ss_pred HHHHCCCEEEcCCEEEEEECC--CC--EEEECC---------------CCEEECCEEEECCCCCCC
Confidence 345789999999999998653 33 345543 357999999999998653
No 224
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=82.05 E-value=0.73 Score=40.21 Aligned_cols=42 Identities=31% Similarity=0.385 Sum_probs=32.2
Q ss_pred HCCCEEec--CCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 79 AMGVEIYP--GIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 79 ~~Gv~i~~--~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
+.+|++.. ...++++.- + ||++.+ |.++.+|+||.|+|....
T Consensus 342 ~~nV~lv~~~~~~I~~it~--~----gv~~~d---------------G~~~~~DvIV~ATGf~~~ 385 (540)
T 3gwf_A 342 RPNVEAVAIKENPIREVTA--K----GVVTED---------------GVLHELDVLVFATGFDAV 385 (540)
T ss_dssp STTEEEEETTTSCEEEECS--S----EEEETT---------------CCEEECSEEEECCCBSCS
T ss_pred CCCEEEEeCCCCCccEEec--C----eEEcCC---------------CCEEECCEEEECCccCcc
Confidence 45888885 667777732 2 788876 567999999999998865
No 225
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=81.42 E-value=1.8 Score=35.86 Aligned_cols=45 Identities=18% Similarity=0.292 Sum_probs=34.3
Q ss_pred HHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 77 AEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 77 A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
.++.|++++.+++|+.+..+ .+ -|.+.+ |.++.++.+|+|+|...
T Consensus 67 ~~~~~i~~~~~~~v~~id~~--~~--~v~~~~---------------g~~~~~d~lvlAtG~~p 111 (410)
T 3ef6_A 67 YGEARIDMLTGPEVTALDVQ--TR--TISLDD---------------GTTLSADAIVIATGSRA 111 (410)
T ss_dssp HHHTTCEEEESCCEEEEETT--TT--EEEETT---------------SCEEECSEEEECCCEEE
T ss_pred HHHCCCEEEeCCEEEEEECC--CC--EEEECC---------------CCEEECCEEEEccCCcc
Confidence 45679999999999998653 33 345544 35899999999999764
No 226
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=81.35 E-value=2.4 Score=37.67 Aligned_cols=53 Identities=17% Similarity=0.248 Sum_probs=37.2
Q ss_pred HHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 72 WLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 72 ~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
++.+..++.||+++++++|+++. +++ |.+.. +|+ ..++.||.||.|.|.....
T Consensus 578 ~~~~~l~~~GV~v~~~~~v~~i~--~~~----v~~~~-----~G~-------~~~i~~D~Vi~a~G~~p~~ 630 (671)
T 1ps9_A 578 IHRTTLLSRGVKMIPGVSYQKID--DDG----LHVVI-----NGE-------TQVLAVDNVVICAGQEPNR 630 (671)
T ss_dssp HHHHHHHHTTCEEECSCEEEEEE--TTE----EEEEE-----TTE-------EEEECCSEEEECCCEEECC
T ss_pred HHHHHHHhcCCEEEeCcEEEEEe--CCe----EEEec-----CCe-------EEEEeCCEEEECCCccccH
Confidence 45667788999999999999884 232 32211 121 1479999999999987643
No 227
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=81.04 E-value=1.7 Score=36.59 Aligned_cols=61 Identities=8% Similarity=-0.032 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHCC-CEEecCCceeEEEEcCCCc----EEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCC
Q psy9486 69 VVKWLGEQAEAMG-VEIYPGIPASEVLYHGDGS----VKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 139 (165)
Q Consensus 69 ~d~~L~~~A~~~G-v~i~~~~~v~~i~~~~~g~----V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~ 139 (165)
+......-++++| ++|+++++|++|..++++. ++.|.+.+ .+|... ..+.||.||.|....
T Consensus 242 ~~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~----~~g~~~------~~~~ad~VI~a~p~~ 307 (504)
T 1sez_A 242 MQTLTDAICKDLREDELRLNSRVLELSCSCTEDSAIDSWSIISAS----PHKRQS------EEESFDAVIMTAPLC 307 (504)
T ss_dssp THHHHHHHHTTSCTTTEETTCCEEEEEEECSSSSSSCEEEEEEBC----SSSSCB------CCCEESEEEECSCHH
T ss_pred HHHHHHHHHhhcccceEEcCCeEEEEEecCCCCcccceEEEEEcC----CCCccc------eeEECCEEEECCCHH
Confidence 3433333344567 8999999999999864442 35566653 123110 368999999998865
No 228
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=81.04 E-value=2.1 Score=35.84 Aligned_cols=53 Identities=8% Similarity=0.014 Sum_probs=37.5
Q ss_pred HHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 73 LGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 73 L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
+.+..++.|++++.++.|+++..+ ++. +-+.... + +.++.++.+|+|+|....
T Consensus 64 ~~~~~~~~gi~~~~~~~V~~id~~-~~~-v~v~~~~-----~---------~~~~~~d~lviAtG~~p~ 116 (452)
T 3oc4_A 64 TEEELRRQKIQLLLNREVVAMDVE-NQL-IAWTRKE-----E---------QQWYSYDKLILATGASQF 116 (452)
T ss_dssp CHHHHHHTTEEEECSCEEEEEETT-TTE-EEEEETT-----E---------EEEEECSEEEECCCCCBC
T ss_pred CHHHHHHCCCEEEECCEEEEEECC-CCE-EEEEecC-----c---------eEEEEcCEEEECCCcccC
Confidence 345567789999999999999764 333 3343221 0 357999999999998653
No 229
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=80.63 E-value=1.5 Score=35.90 Aligned_cols=45 Identities=18% Similarity=0.137 Sum_probs=32.6
Q ss_pred HHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 76 QAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 76 ~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
..++.|++++.+++|+.+-.+ .+. |. .+ |.++.+|.+|+|+|+..
T Consensus 69 ~~~~~~v~~~~g~~v~~id~~--~~~--V~-~~---------------g~~~~~d~lViATGs~p 113 (367)
T 1xhc_A 69 WYRKRGIEIRLAEEAKLIDRG--RKV--VI-TE---------------KGEVPYDTLVLATGARA 113 (367)
T ss_dssp HHHHHTEEEECSCCEEEEETT--TTE--EE-ES---------------SCEEECSEEEECCCEEE
T ss_pred HHHhCCcEEEECCEEEEEECC--CCE--EE-EC---------------CcEEECCEEEECCCCCC
Confidence 345679999999999988543 332 33 22 34799999999999754
No 230
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=80.06 E-value=2.5 Score=34.54 Aligned_cols=49 Identities=18% Similarity=0.166 Sum_probs=35.6
Q ss_pred HHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 73 LGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 73 L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
+.+.+++.|++++.+++|..+..+ +. .|.+.+ .++.++.+|+|+|....
T Consensus 66 ~~~~~~~~~v~~~~~~~v~~i~~~-~~---~v~~~~----------------~~~~~d~lviAtG~~p~ 114 (384)
T 2v3a_A 66 PGAMAEQLNARILTHTRVTGIDPG-HQ---RIWIGE----------------EEVRYRDLVLAWGAEPI 114 (384)
T ss_dssp HHHHHHHTTCEEECSCCCCEEEGG-GT---EEEETT----------------EEEECSEEEECCCEEEC
T ss_pred HHHHHHhCCcEEEeCCEEEEEECC-CC---EEEECC----------------cEEECCEEEEeCCCCcC
Confidence 344557789999999999988653 23 244443 37999999999997653
No 231
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=77.55 E-value=3.1 Score=34.33 Aligned_cols=48 Identities=21% Similarity=0.205 Sum_probs=35.5
Q ss_pred HHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 74 GEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 74 ~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
.+..++.|++++.+++|+.+..+ .+ -|.+.+ |..+.++.+|+|+|+..
T Consensus 72 ~~~~~~~~i~~~~~~~v~~id~~--~~--~v~~~~---------------g~~~~~d~lvlAtG~~~ 119 (415)
T 3lxd_A 72 AQFWEDKAVEMKLGAEVVSLDPA--AH--TVKLGD---------------GSAIEYGKLIWATGGDP 119 (415)
T ss_dssp HHHHHHTTEEEEETCCEEEEETT--TT--EEEETT---------------SCEEEEEEEEECCCEEC
T ss_pred HHHHHHCCcEEEeCCEEEEEECC--CC--EEEECC---------------CCEEEeeEEEEccCCcc
Confidence 34455789999999999998653 33 245543 35899999999999654
No 232
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=77.54 E-value=3.1 Score=36.11 Aligned_cols=56 Identities=9% Similarity=0.065 Sum_probs=38.2
Q ss_pred HHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 71 KWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 71 ~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
+++...+++.|+++++++.|+++..+ ++. +-+.... +|+. .++.++.+|+|+|...
T Consensus 97 ~~~~~~~~~~gi~v~~~~~V~~id~~-~~~-v~v~~~~-----~g~~-------~~~~~d~lviAtG~~p 152 (588)
T 3ics_A 97 QTVERMSKRFNLDIRVLSEVVKINKE-EKT-ITIKNVT-----TNET-------YNEAYDVLILSPGAKP 152 (588)
T ss_dssp SCHHHHHHHTTCEEECSEEEEEEETT-TTE-EEEEETT-----TCCE-------EEEECSEEEECCCEEE
T ss_pred cCHHHHHHhcCcEEEECCEEEEEECC-CCE-EEEeecC-----CCCE-------EEEeCCEEEECCCCCC
Confidence 34556667889999999999999764 343 3333321 1211 2689999999999754
No 233
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=77.51 E-value=4.7 Score=33.82 Aligned_cols=56 Identities=9% Similarity=0.001 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCC
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 139 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~ 139 (165)
.+.+.|++.. +.+|+++++|++|..+ ++.| .|.+.+ |+.. ...++||.||+|.+..
T Consensus 242 ~l~~~l~~~l---~~~i~~~~~V~~I~~~-~~~v-~v~~~~------~~~~-----~~~~~ad~vI~t~p~~ 297 (498)
T 2iid_A 242 KLPTAMYRDI---QDKVHFNAQVIKIQQN-DQKV-TVVYET------LSKE-----TPSVTADYVIVCTTSR 297 (498)
T ss_dssp HHHHHHHHHT---GGGEESSCEEEEEEEC-SSCE-EEEEEC------SSSC-----CCEEEESEEEECSCHH
T ss_pred HHHHHHHHhc---ccccccCCEEEEEEEC-CCeE-EEEEec------CCcc-----cceEEeCEEEECCChH
Confidence 3444444443 3489999999999986 4444 455543 2110 1268999999999865
No 234
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=77.05 E-value=4.7 Score=34.20 Aligned_cols=57 Identities=23% Similarity=0.261 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHCCCEEecCCceeEEEEcCC----CcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 69 VVKWLGEQAEAMGVEIYPGIPASEVLYHGD----GSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 69 ~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~----g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
+..++.+.+++.|++++.++ +..+ +.. +..+-|.+.+ |+. ..+.++.+|+|+|....
T Consensus 97 ~~~~~~~~~~~~gv~~~~g~-~~~i--~~~~~~~~~~~~V~~~~------g~~-------~~~~~d~lviATGs~p~ 157 (499)
T 1xdi_A 97 QSADITAQLLSMGVQVIAGR-GELI--DSTPGLARHRIKATAAD------GST-------SEHEADVVLVATGASPR 157 (499)
T ss_dssp HHHHHHHHHHHTTCEEEESE-EEEC--CSSSCCSSEEEEEECTT------SCE-------EEEEESEEEECCCEEEC
T ss_pred HHHHHHHHHHhCCCEEEEeE-EEEe--cCcccCCCCEEEEEeCC------CcE-------EEEEeCEEEEcCCCCCC
Confidence 34456777888999999886 5433 211 1223344332 210 26999999999997654
No 235
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=77.03 E-value=3.2 Score=34.63 Aligned_cols=53 Identities=13% Similarity=0.165 Sum_probs=34.5
Q ss_pred HHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 75 EQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 75 ~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
+..++.|++++.++.|..+..+ ++. +-+.... +|+. .++.++.+|+|+|++..
T Consensus 64 ~~~~~~gv~~~~~~~v~~i~~~-~~~-v~~~~~~-----~g~~-------~~~~~d~lviAtG~~p~ 116 (447)
T 1nhp_A 64 EKMESRGVNVFSNTEITAIQPK-EHQ-VTVKDLV-----SGEE-------RVENYDKLIISPGAVPF 116 (447)
T ss_dssp HHHHHTTCEEEETEEEEEEETT-TTE-EEEEETT-----TCCE-------EEEECSEEEECCCEEEC
T ss_pred HHHHHCCCEEEECCEEEEEeCC-CCE-EEEEecC-----CCce-------EEEeCCEEEEcCCCCcC
Confidence 3445679999999999988653 333 2233311 1211 24899999999997653
No 236
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=76.93 E-value=6.3 Score=32.75 Aligned_cols=60 Identities=18% Similarity=0.289 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 69 VVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 69 ~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
+...+.+..++.||++++++.|+++. .+. +.+.+ ++.+|+.. ++.++.+|.||+|.|..+
T Consensus 210 ~~~~~~~~l~~~gI~~~~~~~v~~v~---~~~---v~~~~--~~~~g~~~----~~~~i~~D~vv~~~g~~~ 269 (437)
T 3sx6_A 210 SKGILTKGLKEEGIEAYTNCKVTKVE---DNK---MYVTQ--VDEKGETI----KEMVLPVKFGMMIPAFKG 269 (437)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEE---TTE---EEEEE--ECTTSCEE----EEEEEECSEEEEECCEEC
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEEEE---CCe---EEEEe--cccCCccc----cceEEEEeEEEEcCCCcC
Confidence 34567777888999999999999984 232 22221 01233211 135799999999988554
No 237
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=76.54 E-value=4.7 Score=33.61 Aligned_cols=44 Identities=16% Similarity=0.169 Sum_probs=32.2
Q ss_pred HHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcC-eEEEcCEEEEcccCCc
Q psy9486 78 EAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARG-MELHAKVTIFAEGCHG 140 (165)
Q Consensus 78 ~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g-~~i~Ak~VI~A~G~~s 140 (165)
++.|++++.+++|.++..+ + .-|.+.+ + .++.++.+|+|+|...
T Consensus 70 ~~~gi~v~~~~~v~~i~~~--~--~~v~~~~---------------g~~~~~~d~lviAtG~~p 114 (449)
T 3kd9_A 70 KKRGIDLHLNAEVIEVDTG--Y--VRVRENG---------------GEKSYEWDYLVFANGASP 114 (449)
T ss_dssp HHTTCEEETTCEEEEECSS--E--EEEECSS---------------SEEEEECSEEEECCCEEE
T ss_pred HhcCcEEEecCEEEEEecC--C--CEEEECC---------------ceEEEEcCEEEECCCCCC
Confidence 6789999999999988432 2 2244432 2 3799999999999754
No 238
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=76.51 E-value=4 Score=34.28 Aligned_cols=52 Identities=23% Similarity=0.122 Sum_probs=33.4
Q ss_pred HHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 72 WLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 72 ~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
.+.+.+++.|++++.++.+. .+ .+. +-|.+.+ |+. .++.++.+|+|+|....
T Consensus 98 ~~~~~~~~~~v~~~~g~~~~---i~-~~~-~~v~~~~------G~~-------~~~~~d~lviAtG~~p~ 149 (468)
T 2qae_A 98 GVEYLFKKNKVTYYKGEGSF---ET-AHS-IRVNGLD------GKQ-------EMLETKKTIIATGSEPT 149 (468)
T ss_dssp HHHHHHHHHTCEEEEEEEEE---EE-TTE-EEEEETT------SCE-------EEEEEEEEEECCCEEEC
T ss_pred HHHHHHHhCCCEEEEEEEEE---ee-CCE-EEEEecC------Cce-------EEEEcCEEEECCCCCcC
Confidence 34566677899999887542 33 333 2344432 210 47999999999997653
No 239
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=76.28 E-value=1.6 Score=38.19 Aligned_cols=40 Identities=20% Similarity=0.264 Sum_probs=29.7
Q ss_pred CCCEEe--cCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 80 MGVEIY--PGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 80 ~Gv~i~--~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
.+|++. ....++++.- + ||++.+ | ++.+|+||.|+|....
T Consensus 356 ~~V~lvd~~~~~I~~it~--~----gv~~~d---------------G-~~~~D~iI~ATGf~~~ 397 (549)
T 4ap3_A 356 DNVELVDLRSTPIVGMDE--T----GIVTTG---------------A-HYDLDMIVLATGFDAM 397 (549)
T ss_dssp TTEEEEETTTSCEEEEET--T----EEEESS---------------C-EEECSEEEECCCEEES
T ss_pred CCEEEEeCCCCCceEEeC--C----cEEeCC---------------C-ceecCEEEECCccccc
Confidence 378886 2467777742 2 688876 6 8999999999998754
No 240
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=76.14 E-value=4.4 Score=34.30 Aligned_cols=50 Identities=10% Similarity=0.044 Sum_probs=33.0
Q ss_pred HHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 78 EAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 78 ~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
++.|++++.++.|..+..+ ++. +-+.... +|+. .++.++.+|+|+|....
T Consensus 104 ~~~gv~~~~~~~v~~i~~~-~~~-v~v~~~~-----~g~~-------~~~~~d~lviAtG~~p~ 153 (480)
T 3cgb_A 104 DKYGIDAKVRHEVTKVDTE-KKI-VYAEHTK-----TKDV-------FEFSYDRLLIATGVRPV 153 (480)
T ss_dssp HTTCCEEESSEEEEEEETT-TTE-EEEEETT-----TCCE-------EEEECSEEEECCCEEEC
T ss_pred hhcCCEEEeCCEEEEEECC-CCE-EEEEEcC-----CCce-------EEEEcCEEEECCCCccc
Confidence 3459999999999988654 333 2233311 1210 26999999999997653
No 241
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=75.84 E-value=2.6 Score=34.55 Aligned_cols=53 Identities=23% Similarity=0.216 Sum_probs=35.4
Q ss_pred HHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 73 LGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 73 L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
+.+.+++.|++++.+ +|+.+..+ ++ .|.+.+ | ++. ..++.+|.||+|+|....
T Consensus 62 ~~~~~~~~gv~~~~~-~v~~i~~~--~~--~V~~~~-g---~~~-------~~~~~~d~lViAtG~~~~ 114 (409)
T 3h8l_A 62 LSEALPEKGIQFQEG-TVEKIDAK--SS--MVYYTK-P---DGS-------MAEEEYDYVIVGIGAHLA 114 (409)
T ss_dssp HHHHTGGGTCEEEEC-EEEEEETT--TT--EEEEEC-T---TSC-------EEEEECSEEEECCCCEEC
T ss_pred HHHHHhhCCeEEEEe-eEEEEeCC--CC--EEEEcc-C---Ccc-------cceeeCCEEEECCCCCcC
Confidence 455666789999987 88888653 33 244433 0 111 135999999999998654
No 242
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=75.80 E-value=3 Score=35.11 Aligned_cols=50 Identities=16% Similarity=0.189 Sum_probs=33.3
Q ss_pred HHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeE--EEcCEEEEcccCCc
Q psy9486 71 KWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGME--LHAKVTIFAEGCHG 140 (165)
Q Consensus 71 ~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~--i~Ak~VI~A~G~~s 140 (165)
.++.+.+++.|++++.+ .+..+ + ... .-|.+.+ |.+ +.++.+|+|+|+..
T Consensus 93 ~~~~~~~~~~~v~~~~g-~v~~i--d-~~~-~~V~~~~---------------g~~~~~~~d~lviAtG~~p 144 (466)
T 3l8k_A 93 QHKRNMSQYETLTFYKG-YVKIK--D-PTH-VIVKTDE---------------GKEIEAETRYMIIASGAET 144 (466)
T ss_dssp HHHHHHTTCTTEEEESE-EEEEE--E-TTE-EEEEETT---------------SCEEEEEEEEEEECCCEEE
T ss_pred chHHHHHHhCCCEEEEe-EEEEe--c-CCe-EEEEcCC---------------CcEEEEecCEEEECCCCCc
Confidence 55566667789999887 45544 2 232 3344443 245 99999999999754
No 243
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=75.79 E-value=2.8 Score=35.01 Aligned_cols=54 Identities=9% Similarity=0.039 Sum_probs=35.8
Q ss_pred HHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 74 GEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 74 ~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
.+.+++.|++++.++.|..+..+ ++.| -+.... +|+ +.++.++.+|+|+|.+..
T Consensus 65 ~~~~~~~gv~~~~~~~v~~i~~~-~~~v-~v~~~~-----~g~-------~~~~~~d~lviAtGs~p~ 118 (452)
T 2cdu_A 65 PEELSNLGANVQMRHQVTNVDPE-TKTI-KVKDLI-----TNE-------EKTEAYDKLIMTTGSKPT 118 (452)
T ss_dssp HHHHHHTTCEEEESEEEEEEEGG-GTEE-EEEETT-----TCC-------EEEEECSEEEECCCEEEC
T ss_pred HHHHHHcCCEEEeCCEEEEEEcC-CCEE-EEEecC-----CCc-------eEEEECCEEEEccCCCcC
Confidence 34456789999999999988654 3332 233211 111 247999999999997653
No 244
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=75.48 E-value=2.5 Score=36.06 Aligned_cols=61 Identities=20% Similarity=0.107 Sum_probs=39.0
Q ss_pred EhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 65 RLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 65 ~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
...++-.++.+.. +.|++++.++.|.++..+ ++.+.-+...+ ++ -..+.++.+|+|+|+..
T Consensus 159 ~~~~~~~~l~~~l-~~~v~~~~~~~v~~i~~~-~~~~~~~~~~~------~~-------~~~~~~d~lvlAtGa~~ 219 (493)
T 1y56_A 159 DSRKVVEELVGKL-NENTKIYLETSALGVFDK-GEYFLVPVVRG------DK-------LIEILAKRVVLATGAID 219 (493)
T ss_dssp EHHHHHHHHHHTC-CTTEEEETTEEECCCEEC-SSSEEEEEEET------TE-------EEEEEESCEEECCCEEE
T ss_pred CHHHHHHHHHHHH-hcCCEEEcCCEEEEEEcC-CcEEEEEEecC------Ce-------EEEEECCEEEECCCCCc
Confidence 3444445555554 679999999999998775 34433222221 11 02689999999999764
No 245
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=74.51 E-value=4.1 Score=34.47 Aligned_cols=55 Identities=18% Similarity=0.159 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 69 VVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 69 ~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
+..++.+..++.|++++.++ +..+ + .+. +-|.+.+ |+. .++.++.+|+|+|....
T Consensus 107 ~~~~~~~~~~~~gv~~~~g~-~~~i--~-~~~-~~v~~~~------g~~-------~~~~~d~lviAtGs~p~ 161 (479)
T 2hqm_A 107 LNGIYQKNLEKEKVDVVFGW-ARFN--K-DGN-VEVQKRD------NTT-------EVYSANHILVATGGKAI 161 (479)
T ss_dssp HHHHHHHHHHHTTEEEEEEE-EEEC--T-TSC-EEEEESS------SCC-------EEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHHhCCCEEEEeE-EEEe--e-CCE-EEEEeCC------CcE-------EEEEeCEEEEcCCCCCC
Confidence 33455666778999999874 4433 3 333 2344432 211 27999999999997653
No 246
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=74.43 E-value=2.9 Score=35.22 Aligned_cols=57 Identities=16% Similarity=0.010 Sum_probs=30.7
Q ss_pred HHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 70 VKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 70 d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
.+++...+++.|++++.+++|+++..+ ++.+-+.... +|+ ...+.++.+|+|+|...
T Consensus 69 ~~~~~~~~~~~gi~~~~~~~V~~id~~--~~~v~~~~~~-----~g~-------~~~~~~d~lviAtG~~p 125 (472)
T 3iwa_A 69 VRDPEFFRINKDVEALVETRAHAIDRA--AHTVEIENLR-----TGE-------RRTLKYDKLVLALGSKA 125 (472)
T ss_dssp ------------CEEECSEEEEEEETT--TTEEEEEETT-----TCC-------EEEEECSEEEECCCEEE
T ss_pred ccCHHHHhhhcCcEEEECCEEEEEECC--CCEEEEeecC-----CCC-------EEEEECCEEEEeCCCCc
Confidence 334444445689999999999999664 3333344321 121 13799999999999754
No 247
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=74.22 E-value=4.1 Score=34.95 Aligned_cols=54 Identities=11% Similarity=0.001 Sum_probs=36.0
Q ss_pred HHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 73 LGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 73 L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
+...+++.|++++.+++|+++..+ ++. +-+.... +|+ ..++.++.+|+|+|+..
T Consensus 64 ~~~~~~~~~i~~~~~~~V~~id~~-~~~-v~~~~~~-----~g~-------~~~~~~d~lviAtG~~p 117 (565)
T 3ntd_A 64 PESFKARFNVEVRVKHEVVAIDRA-AKL-VTVRRLL-----DGS-------EYQESYDTLLLSPGAAP 117 (565)
T ss_dssp HHHHHHHHCCEEETTEEEEEEETT-TTE-EEEEETT-----TCC-------EEEEECSEEEECCCEEE
T ss_pred HHHHHHhcCcEEEECCEEEEEECC-CCE-EEEEecC-----CCC-------eEEEECCEEEECCCCCC
Confidence 344455689999999999999664 333 3333321 121 13799999999999854
No 248
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=73.78 E-value=1.9 Score=36.90 Aligned_cols=45 Identities=20% Similarity=0.288 Sum_probs=34.2
Q ss_pred HHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 78 EAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 78 ~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
.+.|++++.+++|..+..+ +. -|.+.+ |.++.++.+|+|+|+...
T Consensus 101 ~~~gv~~~~g~~v~~id~~-~~---~V~~~~---------------g~~i~yd~lviATGs~p~ 145 (493)
T 1m6i_A 101 ENGGVAVLTGKKVVQLDVR-DN---MVKLND---------------GSQITYEKCLIATGGTPR 145 (493)
T ss_dssp TTCEEEEEETCCEEEEEGG-GT---EEEETT---------------SCEEEEEEEEECCCEEEC
T ss_pred hcCCeEEEcCCEEEEEECC-CC---EEEECC---------------CCEEECCEEEECCCCCCC
Confidence 4579999999999998664 23 245554 357999999999997654
No 249
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=73.65 E-value=0.96 Score=37.54 Aligned_cols=54 Identities=19% Similarity=0.308 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcccchHHH
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLTKSLS 147 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l~~~l~ 147 (165)
.+.+++.+..++.||++++++.++++ . .++.||.||+|+|..... .+.
T Consensus 189 ~~~~~~~~~l~~~gV~~~~~~~v~~i-------------g-----------------~~~~~D~vv~a~G~~p~~--~~~ 236 (385)
T 3klj_A 189 DGGLFLKDKLDRLGIKIYTNSNFEEM-------------G-----------------DLIRSSCVITAVGVKPNL--DFI 236 (385)
T ss_dssp HHHHHHHHHHHTTTCEEECSCCGGGC-------------H-----------------HHHHHSEEEECCCEEECC--GGG
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEc-------------C-----------------eEEecCeEEECcCcccCh--hhh
Confidence 34455666666677777777666554 1 358899999999987643 344
Q ss_pred hhcCCC
Q psy9486 148 SRFNLR 153 (165)
Q Consensus 148 ~~~gl~ 153 (165)
+..|+.
T Consensus 237 ~~~gl~ 242 (385)
T 3klj_A 237 KDTEIA 242 (385)
T ss_dssp TTSCCC
T ss_pred hhcCCC
Confidence 556664
No 250
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=73.22 E-value=6.6 Score=32.95 Aligned_cols=52 Identities=13% Similarity=0.070 Sum_probs=33.0
Q ss_pred HHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 73 LGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 73 L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
+.+.+++.|++++.++.+ . .+ .+. +-|.+.+ |. ..++.++.+|+|+|.....
T Consensus 103 ~~~~~~~~gv~~~~g~~~-~--~~-~~~-~~v~~~~------gg-------~~~~~~d~lViAtGs~p~~ 154 (474)
T 1zmd_A 103 IAHLFKQNKVVHVNGYGK-I--TG-KNQ-VTATKAD------GG-------TQVIDTKNILIATGSEVTP 154 (474)
T ss_dssp HHHHHHHTTCEEEESEEE-E--EE-TTE-EEEECTT------SC-------EEEEEEEEEEECCCEEECC
T ss_pred HHHHHHhCCCEEEEEEEE-E--ec-CCE-EEEEecC------CC-------cEEEEeCEEEECCCCCCCC
Confidence 456677899999988643 2 23 333 2344432 10 1469999999999987543
No 251
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=72.04 E-value=4.8 Score=33.65 Aligned_cols=49 Identities=16% Similarity=0.129 Sum_probs=31.5
Q ss_pred HHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 72 WLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 72 ~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
.+.+.+++.|++++.++.+. .+ .+. +-|.+ + |.++.++.+|+|+|....
T Consensus 94 ~~~~~~~~~~v~~~~g~~~~---i~-~~~-~~v~~-~---------------g~~~~~d~lviAtG~~p~ 142 (455)
T 2yqu_A 94 GVEFLFKKNGIARHQGTARF---LS-ERK-VLVEE-T---------------GEELEARYILIATGSAPL 142 (455)
T ss_dssp HHHHHHHHHTCEEEESCEEE---SS-SSE-EEETT-T---------------CCEEEEEEEEECCCEEEC
T ss_pred HHHHHHHhCCCEEEEeEEEE---ec-CCe-EEEee-C---------------CEEEEecEEEECCCCCCC
Confidence 34566677899999887432 22 232 22222 2 247999999999997653
No 252
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=71.27 E-value=4.4 Score=33.73 Aligned_cols=44 Identities=14% Similarity=0.164 Sum_probs=32.0
Q ss_pred HHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 77 AEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 77 A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
.++.||+++.+ +|++|-.+ .+ -|.+.+ |.++..|.+|+|+|+..
T Consensus 66 ~~~~gv~~i~~-~v~~Id~~--~~--~V~~~~---------------g~~i~YD~LViAtG~~~ 109 (430)
T 3hyw_A 66 LPKFNIEFINE-KAESIDPD--AN--TVTTQS---------------GKKIEYDYLVIATGPKL 109 (430)
T ss_dssp GGGGTEEEECS-CEEEEETT--TT--EEEETT---------------CCEEECSEEEECCCCEE
T ss_pred HHHCCcEEEEe-EEEEEECC--CC--EEEECC---------------CCEEECCEEEEeCCCCc
Confidence 34679999876 68888653 33 255654 46899999999999753
No 253
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=69.91 E-value=5.6 Score=33.31 Aligned_cols=50 Identities=6% Similarity=0.016 Sum_probs=34.4
Q ss_pred HHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 77 AEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 77 A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
.++.|++++.++.|+.+..+ .+.+.+.... ++ .+.++.+|.+|+|+|++.
T Consensus 67 ~~~~~i~~~~~~~V~~id~~--~~~~~~~~~~-----~~-------~~~~~~yd~lVIATGs~p 116 (437)
T 4eqs_A 67 YDRKQITVKTYHEVIAINDE--RQTVSVLNRK-----TN-------EQFEESYDKLILSPGASA 116 (437)
T ss_dssp HHHHCCEEEETEEEEEEETT--TTEEEEEETT-----TT-------EEEEEECSEEEECCCEEE
T ss_pred HHhcCCEEEeCCeEEEEEcc--CcEEEEEecc-----CC-------ceEEEEcCEEEECCCCcc
Confidence 34679999999999988653 3433344332 11 135789999999999764
No 254
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=69.14 E-value=2.7 Score=37.88 Aligned_cols=67 Identities=13% Similarity=-0.008 Sum_probs=38.5
Q ss_pred HHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccc-c-cc---CCCCCCCCCCcC--eEEEcCEEEEcccCCccc
Q psy9486 71 KWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDV-G-IA---KDGSPKDTFARG--MELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 71 ~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~-g-~~---~~g~~~~~~~~g--~~i~Ak~VI~A~G~~s~l 142 (165)
..+.+..++.||++++++.++++.- ++ +. +..... + .. ..+. ...+.++ .++.||.||+|.|.....
T Consensus 575 ~~~~~~l~~~GV~i~~~~~v~~i~~--~~-v~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~aD~Vv~a~G~~p~~ 648 (729)
T 1o94_A 575 PNMMRRLHELHVEELGDHFCSRIEP--GR-ME-IYNIWGDGSKRTYRGPGV-SPRDANTSHRWIEFDSLVLVTGRHSEC 648 (729)
T ss_dssp HHHHHHHHHTTCEEECSEEEEEEET--TE-EE-EEETTCSCSCCCCCCTTS-CSSCCCCCCEEEECSEEEEESCEEECC
T ss_pred HHHHHHHHhCCCEEEcCcEEEEEEC--Ce-EE-EEEecCCceEEecccccc-cccccCCcceeeeCCEEEECCCCCCCh
Confidence 4566777889999999999999852 22 21 222110 0 00 0000 0011112 238999999999987654
No 255
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=68.08 E-value=8.5 Score=31.54 Aligned_cols=46 Identities=11% Similarity=0.166 Sum_probs=33.9
Q ss_pred HHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 75 EQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 75 ~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
+...+.|++++. ++|+.+..+ ++ .|.+.+ |..+.++.+|+|+|...
T Consensus 65 ~~~~~~~i~~~~-~~v~~id~~--~~--~v~~~~---------------g~~~~~d~lvlAtG~~p 110 (404)
T 3fg2_P 65 KFFQDQAIELIS-DRMVSIDRE--GR--KLLLAS---------------GTAIEYGHLVLATGARN 110 (404)
T ss_dssp HHHHHTTEEEEC-CCEEEEETT--TT--EEEESS---------------SCEEECSEEEECCCEEE
T ss_pred HHHHhCCCEEEE-EEEEEEECC--CC--EEEECC---------------CCEEECCEEEEeeCCCc
Confidence 344578999999 999998653 33 345544 35899999999999753
No 256
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=68.00 E-value=12 Score=31.31 Aligned_cols=45 Identities=24% Similarity=0.311 Sum_probs=30.7
Q ss_pred HHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 74 GEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 74 ~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
.+.+++.|++++.++.+. .+ ... |.+.. .++.++.+|+|+|++..
T Consensus 100 ~~~~~~~gv~~~~g~~~~---~~-~~~---v~v~g----------------~~~~~d~lViATGs~p~ 144 (464)
T 2eq6_A 100 GTLLKGNGVELLRGFARL---VG-PKE---VEVGG----------------ERYGAKSLILATGSEPL 144 (464)
T ss_dssp HHHHHHTTCEEEESCEEE---EE-TTE---EEETT----------------EEEEEEEEEECCCEEEC
T ss_pred HHHHHhCCCEEEeeeEEE---cc-CCE---EEEcc----------------EEEEeCEEEEcCCCCCC
Confidence 455677899999887543 23 232 33321 47999999999998654
No 257
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=67.06 E-value=14 Score=28.69 Aligned_cols=58 Identities=24% Similarity=0.107 Sum_probs=40.0
Q ss_pred EEhHHHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 64 VRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 64 i~r~~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
++..++.........+.++.+.....+...... ..+ -+... +.++.+|.+|+|+|+..
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~----------------~~~~~~d~liiAtGs~~ 116 (312)
T 4gcm_A 59 ITGPDLSTKMFEHAKKFGAVYQYGDIKSVEDKG-EYK--VINFG----------------NKELTAKAVIIATGAEY 116 (312)
T ss_dssp BCHHHHHHHHHHHHHHTTCEEEECCCCEEEECS-SCE--EEECS----------------SCEEEEEEEEECCCEEE
T ss_pred cchHHHHHHHHHHHhhccccccceeeeeeeeee-cce--eeccC----------------CeEEEeceeEEcccCcc
Confidence 445567777788888889998888766665442 222 12222 35899999999999754
No 258
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=66.93 E-value=3.1 Score=34.50 Aligned_cols=48 Identities=13% Similarity=0.126 Sum_probs=33.8
Q ss_pred HHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 74 GEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 74 ~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
.+.+++.|++++.+ +|+.+..+ .+ -|.+.+ +.++.++.+|+|+|....
T Consensus 63 ~~~~~~~gv~~~~~-~v~~id~~--~~--~v~~~~---------------g~~i~~d~liiAtG~~~~ 110 (430)
T 3h28_A 63 APLLPKFNIEFINE-KAESIDPD--AN--TVTTQS---------------GKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp TTTGGGGTEEEECS-CEEEEETT--TT--EEEETT---------------CCEEECSEEEECCCCEEE
T ss_pred HHHHHhcCCEEEEE-EEEEEECC--CC--EEEECC---------------CcEEECCEEEEcCCcccc
Confidence 34456689999975 88888543 33 345543 357999999999998743
No 259
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=64.49 E-value=19 Score=30.00 Aligned_cols=45 Identities=11% Similarity=0.241 Sum_probs=31.2
Q ss_pred HHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 73 LGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 73 L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
+.+.+++.|++++.++.+. .+ .. .|.+.+ .++.+|.+|+|+|++.
T Consensus 102 ~~~~~~~~gv~~~~g~~~~---~~-~~---~v~v~~----------------~~~~~d~lviATGs~p 146 (458)
T 1lvl_A 102 VAALLKKHGVKVVHGWAKV---LD-GK---QVEVDG----------------QRIQCEHLLLATGSSS 146 (458)
T ss_dssp HHHHHHHTTCEEECSCEEE---EE-TT---EEEETT----------------EEEECSEEEECCCEEE
T ss_pred HHHHHHhCCcEEEEEEEEE---cc-CC---EEEEee----------------EEEEeCEEEEeCCCCC
Confidence 3455678999999987653 23 23 244432 3799999999999865
No 260
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=63.32 E-value=10 Score=35.44 Aligned_cols=69 Identities=12% Similarity=0.087 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHC-CCEEecCCceeEEEEcCCCcEEEEEEccc--cccC-CCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 67 GHVVKWLGEQAEAM-GVEIYPGIPASEVLYHGDGSVKGIATGDV--GIAK-DGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 67 ~~~d~~L~~~A~~~-Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~--g~~~-~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
..+-.++.++..+. |++++.+++|.++.. ++.+..+..... -+.. ++.+. ..+.++.+|.+|+|+|+..
T Consensus 181 ~~~~~~~~~~l~~~~~v~~~~~~~V~~i~~--~~~~~~v~~~~~~~~v~~~~~~~~---~~~~~i~~d~lVlATGs~p 253 (965)
T 2gag_A 181 SAWIEQVTSELAEAEETTHLQRTTVFGSYD--ANYLIAAQRRTVHLDGPSGPGVSR---ERIWHIRAKQVVLATGAHE 253 (965)
T ss_dssp HHHHHHHHHHHHHSTTEEEESSEEEEEEET--TTEEEEEEECSTTCSSCCCTTCCS---EEEEEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHhhcCCcEEEeCCEEEeeec--CCceeeeEeecccccccccccCCC---CceEEEECCEEEECCCCcc
Confidence 34445666677775 999999999988853 455554432210 0000 00000 0123699999999999864
No 261
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=63.05 E-value=7.9 Score=30.16 Aligned_cols=28 Identities=25% Similarity=0.292 Sum_probs=21.5
Q ss_pred CeEEEcCEEEEcccCCcccchHHHhhcCCC
Q psy9486 124 GMELHAKVTIFAEGCHGHLTKSLSSRFNLR 153 (165)
Q Consensus 124 g~~i~Ak~VI~A~G~~s~l~~~l~~~~gl~ 153 (165)
|.++.+|.||.|+|..... .+.+..++.
T Consensus 269 g~~i~~D~vi~a~G~~p~~--~~l~~~gl~ 296 (357)
T 4a9w_A 269 GTERAFDAVIWCTGFRPAL--SHLKGLDLV 296 (357)
T ss_dssp SCEEECSEEEECCCBCCCC--GGGTTTTCB
T ss_pred CCEecCCEEEECCCcCCCC--cccCccccc
Confidence 4689999999999988764 455666664
No 262
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=60.79 E-value=15 Score=29.69 Aligned_cols=44 Identities=18% Similarity=0.172 Sum_probs=31.3
Q ss_pred HHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 77 AEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 77 A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
..+.||+++.+ +|+.|-.+ .+ -|.+.+ |.++..+.+|+|+|...
T Consensus 65 ~~~~gv~~i~~-~v~~id~~--~~--~v~~~~---------------g~~i~yd~LviAtG~~~ 108 (401)
T 3vrd_B 65 LRAHGIQVVHD-SALGIDPD--KK--LVKTAG---------------GAEFAYDRCVVAPGIDL 108 (401)
T ss_dssp HHHTTCEEECS-CEEEEETT--TT--EEEETT---------------SCEEECSEEEECCCEEE
T ss_pred HHHCCCEEEEe-EEEEEEcc--Cc--EEEecc---------------cceeecceeeeccCCcc
Confidence 34679999865 67777553 33 244544 46899999999999764
No 263
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=60.72 E-value=21 Score=29.96 Aligned_cols=49 Identities=16% Similarity=0.235 Sum_probs=30.7
Q ss_pred HHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCC
Q psy9486 73 LGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 139 (165)
Q Consensus 73 L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~ 139 (165)
+....++.|++++.+.... .+ .+. +-|.+.+ |+ ..++.++.+|+|+|+.
T Consensus 121 ~~~~~~~~~v~~~~g~~~~---~~-~~~-~~v~~~~------g~-------~~~~~~d~lViATGs~ 169 (491)
T 3urh_A 121 VSFLFKKNKIDGFQGTGKV---LG-QGK-VSVTNEK------GE-------EQVLEAKNVVIATGSD 169 (491)
T ss_dssp HHHHHHHTTCEEEESEEEE---CS-SSE-EEEECTT------SC-------EEEEECSEEEECCCEE
T ss_pred HHHHHHhCCCEEEEEEEEE---ec-CCE-EEEEeCC------Cc-------eEEEEeCEEEEccCCC
Confidence 4445667899999876332 22 232 3344332 21 1479999999999965
No 264
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=60.68 E-value=8.5 Score=33.12 Aligned_cols=40 Identities=18% Similarity=0.278 Sum_probs=27.4
Q ss_pred CCCEEe--cCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 80 MGVEIY--PGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 80 ~Gv~i~--~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
-+|++. ..+.|+++. ++ ||++.+ .++.+|+||.|+|....
T Consensus 351 ~~v~lv~~~~~~i~~i~--~~----gv~~~d----------------~~~~~D~ii~atG~~~~ 392 (542)
T 1w4x_A 351 DNVHLVDTLSAPIETIT--PR----GVRTSE----------------REYELDSLVLATGFDAL 392 (542)
T ss_dssp TTEEEEETTTSCEEEEC--SS----EEEESS----------------CEEECSEEEECCCCCCT
T ss_pred CCEEEEecCCCCceEEc--CC----eEEeCC----------------eEEecCEEEEcCCcccc
Confidence 356665 255666662 11 666654 37999999999999864
No 265
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=60.43 E-value=18 Score=30.24 Aligned_cols=48 Identities=23% Similarity=0.281 Sum_probs=31.6
Q ss_pred HHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 71 KWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 71 ~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
.++.+..++.|++++.++ +..+ + .. .|.+ + |.++.++.+|+|+|.+..
T Consensus 96 ~~~~~~~~~~gv~~~~g~-~~~i--~-~~---~v~~-~---------------g~~~~~d~lviAtGs~p~ 143 (463)
T 2r9z_A 96 SFWDGYVERLGITRVDGH-ARFV--D-AH---TIEV-E---------------GQRLSADHIVIATGGRPI 143 (463)
T ss_dssp HHHHHHHHHTTCEEEESC-EEEE--E-TT---EEEE-T---------------TEEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHCCCEEEEeE-EEEc--c-CC---EEEE-C---------------CEEEEcCEEEECCCCCCC
Confidence 344555677899999885 3332 2 23 2344 2 357999999999997643
No 266
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=59.16 E-value=14 Score=31.22 Aligned_cols=56 Identities=9% Similarity=0.096 Sum_probs=31.4
Q ss_pred HHHHHHHHC-CCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 72 WLGEQAEAM-GVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 72 ~L~~~A~~~-Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
++.+..++. ||+++.++ +..+ + ... +-|.+.. +.+|+.. ..+.++.+|+|+|+...
T Consensus 108 ~~~~~l~~~~gv~~~~g~-~~~i--~-~~~-v~v~~~~---~~~g~~~------~~~~~d~lviAtGs~p~ 164 (490)
T 1fec_A 108 SYEGMFADTEGLTFHQGF-GALQ--D-NHT-VLVRESA---DPNSAVL------ETLDTEYILLATGSWPQ 164 (490)
T ss_dssp HHHHHHHTSTTEEEEESE-EEEE--E-TTE-EEEESSS---STTSCEE------EEEEEEEEEECCCEEEC
T ss_pred HHHHHHhcCCCcEEEEeE-EEEe--e-CCE-EEEEeec---cCCCCce------EEEEcCEEEEeCCCCCC
Confidence 344455677 99999886 4443 3 232 2233210 0011000 47999999999997653
No 267
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=57.45 E-value=18 Score=30.24 Aligned_cols=52 Identities=19% Similarity=0.164 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 69 VVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 69 ~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
+..++....++.|++++.+. +..+ + ... .-|... +.++.++.+|+|+|....
T Consensus 110 ~~~~~~~~~~~~gv~~~~g~-~~~~--~-~~~-~~v~~~----------------g~~~~~d~lviAtG~~p~ 161 (478)
T 3dk9_A 110 LNAIYQNNLTKSHIEIIRGH-AAFT--S-DPK-PTIEVS----------------GKKYTAPHILIATGGMPS 161 (478)
T ss_dssp HHHHHHHHHHHTTCEEEESC-EEEC--S-CSS-CEEEET----------------TEEEECSCEEECCCEEEC
T ss_pred HHHHHHHHHHhCCcEEEEeE-EEEe--e-CCe-EEEEEC----------------CEEEEeeEEEEccCCCCC
Confidence 44556666778899999875 2222 2 221 123332 357999999999997543
No 268
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=57.42 E-value=12 Score=31.67 Aligned_cols=53 Identities=11% Similarity=0.028 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHCCCEEecCC--ceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 67 GHVVKWLGEQAEAMGVEIYPGI--PASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 67 ~~~d~~L~~~A~~~Gv~i~~~~--~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
..+.+.|++...+. +|++++ +|++|..+ ++ +|.+.+ |.++.|+.||.|...+.
T Consensus 216 ~~l~~~la~~l~~~--~i~~~~~~~V~~I~~~-~~---~v~~~~---------------G~~~~ad~VI~a~p~~~ 270 (484)
T 4dsg_A 216 GIIYQAIKEKLPSE--KLTFNSGFQAIAIDAD-AK---TITFSN---------------GEVVSYDYLISTVPFDN 270 (484)
T ss_dssp HHHHHHHHHHSCGG--GEEECGGGCEEEEETT-TT---EEEETT---------------SCEEECSEEEECSCHHH
T ss_pred HHHHHHHHhhhhhC--eEEECCCceeEEEEec-CC---EEEECC---------------CCEEECCEEEECCCHHH
Confidence 34445555444332 788884 69999875 45 345543 35799999999997654
No 269
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=56.65 E-value=22 Score=30.27 Aligned_cols=49 Identities=10% Similarity=-0.022 Sum_probs=29.6
Q ss_pred HHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 75 EQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 75 ~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
...++.||+++.+. +..+ + ... +-|.+. +|+. .++.+|.+|+|+|+...
T Consensus 138 ~~~~~~gV~~i~g~-a~~~--d-~~~-v~v~~~------~g~~-------~~i~~d~lViATGs~p~ 186 (519)
T 3qfa_A 138 VALREKKVVYENAY-GQFI--G-PHR-IKATNN------KGKE-------KIYSAERFLIATGERPR 186 (519)
T ss_dssp HHHHHTTCEEECSE-EEEE--E-TTE-EEEECT------TCCC-------CEEEEEEEEECCCEEEC
T ss_pred HHHHhCCCEEEEEE-EEEe--e-CCE-EEEEcC------CCCE-------EEEECCEEEEECCCCcC
Confidence 34566899998774 2222 2 232 224332 2321 37999999999997653
No 270
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=56.53 E-value=21 Score=29.93 Aligned_cols=53 Identities=19% Similarity=0.196 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
.+..++.+..++.|++++.+ .+..+ + .. .|.+.. + +.++.++.+|+|+|....
T Consensus 115 ~~~~~~~~~~~~~~v~~~~g-~~~~i--~-~~---~v~v~~-----~---------~~~~~~d~lviAtG~~p~ 167 (484)
T 3o0h_A 115 RLEGLYREGLQNSNVHIYES-RAVFV--D-EH---TLELSV-----T---------GERISAEKILIATGAKIV 167 (484)
T ss_dssp HHHHHHHHHHHHTTCEEEES-CEEEE--E-TT---EEEETT-----T---------CCEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHHHhCCCEEEEe-EEEEe--e-CC---EEEEec-----C---------CeEEEeCEEEEccCCCcc
Confidence 34556677778899999987 33333 2 23 234431 1 357999999999997654
No 271
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=56.42 E-value=28 Score=29.27 Aligned_cols=50 Identities=20% Similarity=0.143 Sum_probs=29.8
Q ss_pred HHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 74 GEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 74 ~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
....++.||+++.+. +. +- +...+-|.+.+ |+ ..++.+|.+|+|+|....
T Consensus 111 ~~~~~~~~V~~i~g~-~~---~~-~~~~v~v~~~~------g~-------~~~~~~d~lViATGs~p~ 160 (488)
T 3dgz_A 111 RVQLQDRKVKYFNIK-AS---FV-DEHTVRGVDKG------GK-------ATLLSAEHIVIATGGRPR 160 (488)
T ss_dssp HHHHHHTTCEEECCE-EE---ES-SSSEEEEECTT------SC-------EEEEEEEEEEECCCEEEC
T ss_pred HHHHHhCCCEEEEEE-EE---Ec-cCCeEEEEeCC------Cc-------eEEEECCEEEEcCCCCCC
Confidence 344566899998764 22 21 22223344332 21 147999999999997654
No 272
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=54.39 E-value=13 Score=31.06 Aligned_cols=47 Identities=15% Similarity=0.116 Sum_probs=29.0
Q ss_pred HHHHC-CCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 76 QAEAM-GVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 76 ~A~~~-Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
..++. |++++.+. +..+ + .+. +-|.+.+ |+ ..++.++.+|+|+|...
T Consensus 103 ~~~~~~~v~~~~g~-~~~~--~-~~~-~~v~~~~------g~-------~~~~~~d~lviAtGs~p 150 (467)
T 1zk7_A 103 ILGGNPAITVVHGE-ARFK--D-DQS-LTVRLNE------GG-------ERVVMFDRCLVATGASP 150 (467)
T ss_dssp HHTTCTTEEEEEEE-EEEE--E-TTE-EEEEETT------SS-------EEEEECSEEEECCCEEE
T ss_pred HHhccCCeEEEEEE-EEEc--c-CCE-EEEEeCC------Cc-------eEEEEeCEEEEeCCCCC
Confidence 34556 99998874 4433 2 232 3355543 21 04799999999999754
No 273
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=53.63 E-value=26 Score=29.09 Aligned_cols=47 Identities=15% Similarity=0.206 Sum_probs=30.9
Q ss_pred HHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 71 KWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 71 ~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
..+.+..++.|++++.++. ..+ + ... |.+ + |.++.++.+|+|+|...
T Consensus 97 ~~~~~~~~~~~v~~~~g~~-~~i--~-~~~---v~~-~---------------g~~~~~d~lviAtGs~p 143 (450)
T 1ges_A 97 TSYENVLGKNNVDVIKGFA-RFV--D-AKT---LEV-N---------------GETITADHILIATGGRP 143 (450)
T ss_dssp HHHHHHHHHTTCEEEESCC-EEE--E-TTE---EEE-T---------------TEEEEEEEEEECCCEEE
T ss_pred HHHHHHHHhCCCEEEEeEE-EEe--c-CCE---EEE-C---------------CEEEEeCEEEECCCCCC
Confidence 3344555778999998854 332 3 232 334 2 35799999999999754
No 274
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=53.10 E-value=17 Score=30.28 Aligned_cols=50 Identities=22% Similarity=0.328 Sum_probs=30.9
Q ss_pred HHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 73 LGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 73 L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
+....++.|++++.+..+. .+ ... +-|.+.+ |.. ..+.++.+|+|+|...
T Consensus 105 ~~~~~~~~~v~~~~g~~~~---~~-~~~-~~v~~~~------g~~-------~~~~~d~lvlAtG~~p 154 (476)
T 3lad_A 105 VASLIKANGVTLFEGHGKL---LA-GKK-VEVTAAD------GSS-------QVLDTENVILASGSKP 154 (476)
T ss_dssp HHHHHHHHTCEEEESEEEE---CS-TTC-EEEECTT------SCE-------EEECCSCEEECCCEEE
T ss_pred HHHHHHhCCCEEEEeEEEE---ec-CCE-EEEEcCC------Cce-------EEEEcCEEEEcCCCCC
Confidence 3345567899999876432 33 233 2344432 211 4799999999999764
No 275
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=52.83 E-value=20 Score=31.67 Aligned_cols=47 Identities=11% Similarity=0.182 Sum_probs=31.8
Q ss_pred CCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccC
Q psy9486 81 GVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGC 138 (165)
Q Consensus 81 Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~ 138 (165)
+++|.++++|++|..++ +.| -|.+.+. ..+. .+..+.||.||+|...
T Consensus 410 ~l~I~l~~~V~~I~~~~-~~v-~V~~~~~---~~~~------~~~~~~Ad~VI~tvP~ 456 (662)
T 2z3y_A 410 GLDIKLNTAVRQVRYTA-SGC-EVIAVNT---RSTS------QTFIYKCDAVLCTLPL 456 (662)
T ss_dssp TCEEETTEEEEEEEEET-TEE-EEEEEES---SCTT------CEEEEEESEEEECCCH
T ss_pred cCceecCCeEEEEEECC-CcE-EEEEeec---ccCC------CCeEEEeCEEEECCCH
Confidence 77999999999999864 333 3554330 0111 1357999999999873
No 276
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=52.59 E-value=23 Score=29.47 Aligned_cols=53 Identities=17% Similarity=0.151 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
.+..++.+..++.|++++.+ .+..+ +.. .|.+.+ + +..+.++.+|+|+|....
T Consensus 94 ~~~~~~~~~~~~~gv~~~~g-~~~~i----~~~--~v~~~~-----~---------~~~~~~d~lviAtG~~p~ 146 (463)
T 4dna_A 94 RLEGLYRKGLANAGAEILDT-RAELA----GPN--TVKLLA-----S---------GKTVTAERIVIAVGGHPS 146 (463)
T ss_dssp HHHHHHHHHHHHHTCEEEES-CEEES----SSS--EEEETT-----T---------TEEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHHHhCCCEEEEE-EEEEe----eCC--EEEEec-----C---------CeEEEeCEEEEecCCCcc
Confidence 44556777778889999987 33322 222 244421 1 358999999999997654
No 277
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=51.55 E-value=22 Score=30.12 Aligned_cols=54 Identities=17% Similarity=0.219 Sum_probs=30.3
Q ss_pred HHHHHHHC-CCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 73 LGEQAEAM-GVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 73 L~~~A~~~-Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
+....++. ||+++.++ +..+ + ... |.+.+. .+... ..+.++.++.+|+|+|+..
T Consensus 113 ~~~~l~~~~gv~~~~g~-~~~i--~-~~~---v~v~~~---~~~~~----~~~~~~~~d~lViATGs~p 167 (495)
T 2wpf_A 113 YEGMFNDTEGLDFFLGW-GSLE--S-KNV---VVVRET---ADPKS----AVKERLQADHILLATGSWP 167 (495)
T ss_dssp HHHHHHHCTTEEEEESE-EEEE--E-TTE---EEEESS---SSTTS----CEEEEEEEEEEEECCCEEE
T ss_pred HHHHHhcCCCeEEEEeE-EEEe--e-CCE---EEEeec---CCccC----CCCeEEEcCEEEEeCCCCc
Confidence 34445677 99999885 4433 3 232 333210 01000 0024799999999999764
No 278
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=50.49 E-value=45 Score=25.43 Aligned_cols=53 Identities=11% Similarity=0.037 Sum_probs=32.7
Q ss_pred HCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 79 AMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 79 ~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
..+++.+..+.+.++... +....+++..+. ..+ .+.++.++.||+|.|.....
T Consensus 200 ~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~---~~~-------~~~~i~~d~vi~a~G~~pn~ 252 (314)
T 4a5l_A 200 HPKIEVIWNSELVELEGD-GDLLNGAKIHNL---VSG-------EYKVVPVAGLFYAIGHSPNS 252 (314)
T ss_dssp CTTEEEECSEEEEEEEES-SSSEEEEEEEET---TTC-------CEEEEECSEEEECSCEEESC
T ss_pred ccceeeEeeeeeEEEEee-eeccceeEEeec---ccc-------cceeeccccceEecccccCh
Confidence 345555556666666553 455566655431 111 14679999999999987654
No 279
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=48.17 E-value=19 Score=30.54 Aligned_cols=59 Identities=12% Similarity=0.110 Sum_probs=27.5
Q ss_pred HHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEcc----ccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 71 KWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGD----VGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 71 ~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~----~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
..+.+.+++.|++++.++.+ .+ + ...|. |.... .+. .++ .+.++.+|.+|+|+|.+...
T Consensus 93 ~~~~~~~~~~gv~~~~g~~~-~i--d-~~~v~-v~~~~~~~~~~~-~~~-------~~~~~~~d~lViAtGs~p~~ 155 (500)
T 1onf_A 93 NIYRQNLSKDKVDLYEGTAS-FL--S-ENRIL-IKGTKDNNNKDN-GPL-------NEEILEGRNILIAVGNKPVF 155 (500)
T ss_dssp HHHHHHHHHTTCEEEESCCC-CC--------------------------------------CBSSEEECCCCCBCC
T ss_pred HHHHHHHHhCCCEEEEeEEE-Ee--e-CCEEE-EEeccccccccc-cCC-------CceEEEeCEEEECCCCCCCC
Confidence 34556667899999988643 22 2 22221 21100 000 000 02468999999999987543
No 280
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=47.22 E-value=23 Score=30.08 Aligned_cols=20 Identities=15% Similarity=0.165 Sum_probs=16.9
Q ss_pred cCeEEEcCEEEEcccCCccc
Q psy9486 123 RGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 123 ~g~~i~Ak~VI~A~G~~s~l 142 (165)
.|.++.+|+||.|||-....
T Consensus 392 dg~~~~~D~VI~ATGy~~~~ 411 (501)
T 4b63_A 392 VKETLEVDALMVATGYNRNA 411 (501)
T ss_dssp CCCEEEESEEEECCCEECCT
T ss_pred CCeEEECCEEEECcCCCCCC
Confidence 46789999999999987654
No 281
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=46.89 E-value=35 Score=28.52 Aligned_cols=48 Identities=15% Similarity=0.116 Sum_probs=29.1
Q ss_pred HHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 75 EQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 75 ~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
...++.||+++.+... . .+ ... +-|.+.+ | ..++.+|.+|+|+|....
T Consensus 116 ~~~~~~~v~~~~g~a~--~-~~-~~~-v~v~~~~------g--------~~~~~~d~lviATGs~p~ 163 (483)
T 3dgh_A 116 VDLRDKKVEYINGLGS--F-VD-SHT-LLAKLKS------G--------ERTITAQTFVIAVGGRPR 163 (483)
T ss_dssp HHHHHTTCEEECSEEE--E-EE-TTE-EEEECTT------C--------CEEEEEEEEEECCCEEEC
T ss_pred HHHHhCCCEEEEeEEE--E-cc-CCE-EEEEeCC------C--------eEEEEcCEEEEeCCCCcC
Confidence 3456689999876432 1 22 232 2344432 2 136999999999997653
No 282
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=39.65 E-value=36 Score=31.50 Aligned_cols=47 Identities=11% Similarity=0.182 Sum_probs=31.5
Q ss_pred CCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccC
Q psy9486 81 GVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGC 138 (165)
Q Consensus 81 Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~ 138 (165)
+++|+++++|++|.+++ +.| .|.+.+. .++. .+..+.||.||+|.-.
T Consensus 581 ~l~I~Lnt~V~~I~~~~-~gV-~V~~~~~---~~~~------~g~~i~AD~VIvTvPl 627 (852)
T 2xag_A 581 GLDIKLNTAVRQVRYTA-SGC-EVIAVNT---RSTS------QTFIYKCDAVLCTLPL 627 (852)
T ss_dssp TCCEECSEEEEEEEEET-TEE-EEEEEES---SSTT------CEEEEEESEEEECCCH
T ss_pred CCCEEeCCeEEEEEEcC-CcE-EEEEeec---ccCC------CCeEEECCEEEECCCH
Confidence 56899999999999863 433 3555421 0111 1357999999998763
No 283
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=38.08 E-value=31 Score=28.91 Aligned_cols=19 Identities=21% Similarity=0.356 Sum_probs=16.3
Q ss_pred CeEEEcCEEEEcccCCccc
Q psy9486 124 GMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 124 g~~i~Ak~VI~A~G~~s~l 142 (165)
|.++.+|.||.|+|.....
T Consensus 260 G~~i~~D~Vi~atG~~p~~ 278 (464)
T 2xve_A 260 GSSEKVDAIILCTGYIHHF 278 (464)
T ss_dssp SCEEECSEEEECCCBCCCC
T ss_pred CCEEeCCEEEECCCCCCCC
Confidence 5689999999999988654
No 284
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=38.05 E-value=29 Score=31.57 Aligned_cols=57 Identities=9% Similarity=-0.078 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHCCCEEecCCcee--EEEEcCCCc-----EEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEccc
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPAS--EVLYHGDGS-----VKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEG 137 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~--~i~~~~~g~-----V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G 137 (165)
.+-+.|+++..+ |..|.++++|+ +|..++++. -+.|.+.. +|+. ..+.||.||+|.-
T Consensus 348 ~L~~aLa~~l~~-g~~I~l~~~V~~~~I~~~~~g~~~~~~~V~V~~~~-----~G~~-------~~~~aD~VIvTvP 411 (721)
T 3ayj_A 348 EFIRNLFLKAQN-VGAGKLVVQVRQERVANACHSGTASARAQLLSYDS-----HNAV-------HSEAYDFVILAVP 411 (721)
T ss_dssp HHHHHHHHHHHH-HTTTSEEEEEECEEEEEEEECSSSSCCEEEEEEET-----TCCE-------EEEEESEEEECSC
T ss_pred HHHHHHHHhccc-CCceEeCCEEEeeeEEECCCCCccccceEEEEEec-----CCce-------EEEEcCEEEECCC
Confidence 445556655533 56678889999 998754441 23343322 3321 2799999999765
No 285
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=35.17 E-value=78 Score=27.41 Aligned_cols=52 Identities=13% Similarity=0.229 Sum_probs=30.3
Q ss_pred HHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCccc
Q psy9486 75 EQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 142 (165)
Q Consensus 75 ~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~l 142 (165)
...++.||+++.+.. .++ + ... +-|.... ..+. +.+++|+.+|+|+|++..+
T Consensus 148 ~~l~~~~V~~i~G~a--~f~-~-~~~-v~V~~~~----~~~~-------~~~i~a~~iiIATGs~P~~ 199 (542)
T 4b1b_A 148 TGLRSSKVKYINGLA--KLK-D-KNT-VSYYLKG----DLSK-------EETVTGKYILIATGCRPHI 199 (542)
T ss_dssp HHHHHTTCEEECEEE--EEE-E-TTE-EEEEEC------CCC-------EEEEEEEEEEECCCEEECC
T ss_pred HHHHhCCCEEEeeeE--EEc-C-CCc-ceEeecc----cCCc-------eEEEeeeeEEeccCCCCCC
Confidence 345678999987642 222 2 233 2343332 1111 3579999999999987643
No 286
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=33.49 E-value=87 Score=26.89 Aligned_cols=16 Identities=19% Similarity=0.229 Sum_probs=13.6
Q ss_pred eEEEcCEEEEcccCCc
Q psy9486 125 MELHAKVTIFAEGCHG 140 (165)
Q Consensus 125 ~~i~Ak~VI~A~G~~s 140 (165)
.++.+|.||+|+|+..
T Consensus 246 ~~~~~d~lviAtGs~p 261 (598)
T 2x8g_A 246 STITGNKIILATGERP 261 (598)
T ss_dssp EEEEEEEEEECCCEEE
T ss_pred EEEEeCEEEEeCCCCC
Confidence 3699999999999754
No 287
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=32.64 E-value=9.5 Score=32.32 Aligned_cols=46 Identities=15% Similarity=0.140 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCc
Q psy9486 69 VVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 140 (165)
Q Consensus 69 ~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s 140 (165)
+-.++.+.+++.|++|++++.|. .. |.+.+ ..+.++.||+|+|++.
T Consensus 174 ~~~~~~~~l~~~gv~~~~~~~v~-------~~---v~~~~----------------~~~~~d~vvlAtG~~~ 219 (456)
T 2vdc_G 174 VVERRVKLLADAGVIYHPNFEVG-------RD---ASLPE----------------LRRKHVAVLVATGVYK 219 (456)
T ss_dssp HHHHHHHHHHHTTCEEETTCCBT-------TT---BCHHH----------------HHSSCSEEEECCCCCE
T ss_pred HHHHHHHHHHHCCcEEEeCCEec-------cE---EEhhH----------------hHhhCCEEEEecCCCC
Confidence 44456777889999999988653 11 12221 1356899999999863
No 288
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=30.97 E-value=44 Score=28.39 Aligned_cols=42 Identities=21% Similarity=0.291 Sum_probs=28.5
Q ss_pred HHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCCcc
Q psy9486 78 EAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 141 (165)
Q Consensus 78 ~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~s~ 141 (165)
++.|+++++...|..+ + ... |.+.. ..+.++.+|+|+|+...
T Consensus 146 ~~~gv~~~~~~~v~~i--~-~~~---v~~~g----------------~~~~~d~lViATGs~p~ 187 (523)
T 1mo9_A 146 EQLNLEYILNCPAKVI--D-NHT---VEAAG----------------KVFKAKNLILAVGAGPG 187 (523)
T ss_dssp HTSCCCEEESSCCEEE--E-TTE---EEETT----------------EEEEBSCEEECCCEECC
T ss_pred ccCCcEEEEeeEEEEe--e-CCE---EEECC----------------EEEEeCEEEECCCCCCC
Confidence 6789999855566655 2 232 33321 47999999999997543
No 289
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=26.36 E-value=28 Score=30.69 Aligned_cols=24 Identities=13% Similarity=0.250 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHCCCEEecCCcee
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPAS 91 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~ 91 (165)
.+-.++.+.+++.|++++.++.|+
T Consensus 426 ~~~~~~~~~~~~~gv~~~~~~~v~ 449 (671)
T 1ps9_A 426 ETLRYYRRMIEVTGVTLKLNHTVT 449 (671)
T ss_dssp HHHHHHHHHHHHHTCEEEESCCCC
T ss_pred HHHHHHHHHHHHcCCEEEeCcEec
Confidence 345567788888999999887654
No 290
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=21.21 E-value=13 Score=34.93 Aligned_cols=48 Identities=27% Similarity=0.235 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEcCCCcEEEEEEccccccCCCCCCCCCCcCeEEEcCEEEEcccCC
Q psy9486 68 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 139 (165)
Q Consensus 68 ~~d~~L~~~A~~~Gv~i~~~~~v~~i~~~~~g~V~GV~~~~~g~~~~g~~~~~~~~g~~i~Ak~VI~A~G~~ 139 (165)
.+..|..+..++.||++++++.+.. .. |.+.+ +.++.+|.||+|+|++
T Consensus 239 ~~~~~~~~~~~~~gv~~~~~~~v~~------~~---v~~~~---------------~~~~~~d~vvlAtGa~ 286 (1025)
T 1gte_A 239 DVVNFEIELMKDLGVKIICGKSLSE------NE---ITLNT---------------LKEEGYKAAFIGIGLP 286 (1025)
T ss_dssp HHHHHHHHHHHTTTCEEEESCCBST------TS---BCHHH---------------HHHTTCCEEEECCCCC
T ss_pred HHHHHHHHHHHHCCcEEEcccEecc------ce---EEhhh---------------cCccCCCEEEEecCCC
Confidence 3455667888899999999887631 11 22222 1246789999999984
Done!