Query psy9487
Match_columns 101
No_of_seqs 100 out of 1037
Neff 6.5
Searched_HMMs 29240
Date Fri Aug 16 20:39:36 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9487.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9487hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2gmh_A Electron transfer flavo 99.6 9.2E-15 3.1E-19 117.7 10.4 95 7-101 133-227 (584)
2 3oz2_A Digeranylgeranylglycero 99.3 3.9E-11 1.3E-15 88.6 10.1 77 9-98 93-169 (397)
3 3cgv_A Geranylgeranyl reductas 99.1 4E-10 1.4E-14 84.0 9.2 74 11-97 95-168 (397)
4 3atr_A Conserved archaeal prot 99.0 1.4E-09 4.6E-14 84.1 8.8 76 12-98 94-169 (453)
5 3nix_A Flavoprotein/dehydrogen 99.0 1.2E-09 4E-14 82.5 7.5 75 11-98 99-173 (421)
6 3e1t_A Halogenase; flavoprotei 99.0 1.9E-09 6.4E-14 84.9 8.4 75 11-97 104-178 (512)
7 2weu_A Tryptophan 5-halogenase 98.9 5.2E-09 1.8E-13 81.7 7.6 70 11-96 166-235 (511)
8 2x3n_A Probable FAD-dependent 98.8 8E-09 2.7E-13 77.8 7.7 70 12-97 101-172 (399)
9 3i3l_A Alkylhalidase CMLS; fla 98.8 1.8E-08 6.2E-13 81.5 9.0 75 11-98 121-195 (591)
10 3dje_A Fructosyl amine: oxygen 98.8 4.4E-08 1.5E-12 74.6 9.7 64 13-92 156-222 (438)
11 2e4g_A Tryptophan halogenase; 98.7 2.5E-08 8.5E-13 79.3 8.0 68 11-94 187-255 (550)
12 2pyx_A Tryptophan halogenase; 98.7 3.1E-08 1.1E-12 78.1 7.8 66 12-93 169-235 (526)
13 3rp8_A Flavoprotein monooxygen 98.7 6.3E-08 2.1E-12 73.2 8.9 69 10-97 119-187 (407)
14 2aqj_A Tryptophan halogenase, 98.7 3E-08 1E-12 78.3 7.2 69 11-95 158-226 (538)
15 2qa1_A PGAE, polyketide oxygen 98.7 1E-07 3.4E-12 75.3 9.6 73 12-98 100-172 (500)
16 2qa2_A CABE, polyketide oxygen 98.7 1E-07 3.5E-12 75.2 9.4 73 12-98 101-173 (499)
17 3nyc_A D-arginine dehydrogenas 98.7 1.3E-07 4.3E-12 69.9 9.0 67 12-96 148-215 (381)
18 4at0_A 3-ketosteroid-delta4-5a 98.7 8.4E-08 2.9E-12 75.5 8.4 64 19-94 203-267 (510)
19 3alj_A 2-methyl-3-hydroxypyrid 98.7 1.3E-07 4.6E-12 70.9 9.1 68 11-98 100-167 (379)
20 3ihg_A RDME; flavoenzyme, anth 98.6 9.5E-08 3.2E-12 75.2 8.4 77 9-97 111-189 (535)
21 1qo8_A Flavocytochrome C3 fuma 98.6 7.8E-08 2.7E-12 76.6 7.7 67 16-94 248-315 (566)
22 1y56_B Sarcosine oxidase; dehy 98.6 2.1E-07 7.3E-12 69.2 9.6 67 14-97 145-212 (382)
23 3dme_A Conserved exported prot 98.6 1.4E-07 4.6E-12 69.1 8.2 71 12-96 144-215 (369)
24 1rp0_A ARA6, thiazole biosynth 98.6 1.7E-07 5.8E-12 68.6 8.5 85 4-96 103-196 (284)
25 1k0i_A P-hydroxybenzoate hydro 98.6 8.2E-08 2.8E-12 72.0 6.9 72 11-98 96-170 (394)
26 1y0p_A Fumarate reductase flav 98.6 1.3E-07 4.5E-12 75.3 8.4 67 17-94 254-320 (571)
27 2i0z_A NAD(FAD)-utilizing dehy 98.6 3.6E-07 1.2E-11 70.7 10.0 64 12-91 124-191 (447)
28 1d4d_A Flavocytochrome C fumar 98.6 2E-07 6.9E-12 74.6 8.2 66 17-94 254-320 (572)
29 3jsk_A Cypbp37 protein; octame 98.5 2.4E-07 8.2E-12 71.3 7.9 96 4-100 144-260 (344)
30 3fmw_A Oxygenase; mithramycin, 98.5 1.5E-07 5.2E-12 75.6 6.3 72 11-97 141-213 (570)
31 4dgk_A Phytoene dehydrogenase; 98.5 3.7E-07 1.3E-11 70.4 8.2 61 17-93 220-280 (501)
32 2gag_B Heterotetrameric sarcos 98.5 4.3E-07 1.5E-11 67.8 7.9 67 14-97 170-237 (405)
33 2gjc_A Thiazole biosynthetic e 98.5 8E-07 2.7E-11 67.8 9.0 96 3-99 129-247 (326)
34 3axb_A Putative oxidoreductase 98.5 4.2E-07 1.4E-11 69.4 7.4 69 12-96 175-260 (448)
35 2oln_A NIKD protein; flavoprot 98.4 1.1E-06 3.6E-11 66.0 9.2 67 12-96 147-214 (397)
36 1ryi_A Glycine oxidase; flavop 98.4 4E-07 1.4E-11 67.6 6.6 67 13-97 159-226 (382)
37 4hb9_A Similarities with proba 98.4 1.2E-06 4.2E-11 64.9 8.6 68 12-98 106-173 (412)
38 2dkh_A 3-hydroxybenzoate hydro 98.4 9.2E-07 3.1E-11 71.6 8.4 81 11-98 134-218 (639)
39 3da1_A Glycerol-3-phosphate de 98.4 9.5E-07 3.2E-11 70.7 7.8 68 14-92 166-233 (561)
40 3c4n_A Uncharacterized protein 98.4 4.9E-07 1.7E-11 68.8 5.7 66 12-95 166-241 (405)
41 2cul_A Glucose-inhibited divis 98.3 1.2E-06 4.2E-11 62.1 7.1 60 16-92 66-126 (232)
42 1pj5_A N,N-dimethylglycine oxi 98.3 2.4E-06 8.3E-11 70.8 9.5 65 12-93 145-209 (830)
43 3ps9_A TRNA 5-methylaminomethy 98.3 2.5E-06 8.4E-11 69.2 9.2 64 12-92 411-474 (676)
44 2uzz_A N-methyl-L-tryptophan o 98.3 4.1E-06 1.4E-10 61.9 9.5 63 12-92 143-205 (372)
45 2wdq_A Succinate dehydrogenase 98.3 2.8E-06 9.5E-11 68.5 8.8 66 18-93 143-208 (588)
46 3nlc_A Uncharacterized protein 98.3 5.2E-06 1.8E-10 66.9 9.6 60 17-92 219-278 (549)
47 2gf3_A MSOX, monomeric sarcosi 98.2 6.7E-06 2.3E-10 60.9 9.5 62 13-92 145-206 (389)
48 2vou_A 2,6-dihydroxypyridine h 98.2 7E-06 2.4E-10 61.9 9.5 66 14-98 95-160 (397)
49 3c96_A Flavin-containing monoo 98.2 5.4E-06 1.9E-10 62.8 8.6 74 12-98 101-176 (410)
50 2r0c_A REBC; flavin adenine di 98.2 6E-06 2.1E-10 65.6 9.0 74 10-98 130-203 (549)
51 4a9w_A Monooxygenase; baeyer-v 98.2 5.8E-06 2E-10 59.9 8.0 72 4-92 62-133 (357)
52 2h88_A Succinate dehydrogenase 98.2 5E-06 1.7E-10 67.8 8.2 65 18-93 155-219 (621)
53 3ka7_A Oxidoreductase; structu 98.2 5.5E-06 1.9E-10 62.3 7.8 58 18-92 196-253 (425)
54 3pvc_A TRNA 5-methylaminomethy 98.2 6E-06 2.1E-10 67.2 8.5 63 13-92 407-470 (689)
55 2rgh_A Alpha-glycerophosphate 98.2 3.9E-06 1.3E-10 67.3 7.2 68 15-93 185-252 (571)
56 2xdo_A TETX2 protein; tetracyc 98.2 2.1E-06 7.2E-11 64.8 5.2 68 11-97 121-188 (398)
57 2qcu_A Aerobic glycerol-3-phos 98.2 6.6E-06 2.2E-10 64.5 8.1 67 15-93 146-212 (501)
58 3p1w_A Rabgdi protein; GDI RAB 98.1 6E-06 2.1E-10 65.7 7.6 58 18-90 256-313 (475)
59 2bs2_A Quinol-fumarate reducta 98.1 8.8E-06 3E-10 66.8 8.6 64 19-93 159-222 (660)
60 1pn0_A Phenol 2-monooxygenase; 98.1 1E-05 3.6E-10 66.0 8.6 90 9-98 110-237 (665)
61 3v76_A Flavoprotein; structura 98.1 1E-05 3.5E-10 62.7 8.1 58 16-91 130-187 (417)
62 1kf6_A Fumarate reductase flav 98.0 9.2E-06 3.1E-10 65.7 7.1 65 18-93 134-199 (602)
63 2ywl_A Thioredoxin reductase r 98.0 2.3E-05 8E-10 52.7 7.8 64 15-97 53-116 (180)
64 1chu_A Protein (L-aspartate ox 98.0 6.6E-06 2.3E-10 65.6 5.0 65 19-93 139-210 (540)
65 2zxi_A TRNA uridine 5-carboxym 97.9 3.4E-05 1.1E-09 63.6 8.2 63 13-92 118-181 (637)
66 3ces_A MNMG, tRNA uridine 5-ca 97.9 3.2E-05 1.1E-09 63.8 8.1 63 13-92 119-182 (651)
67 2gqf_A Hypothetical protein HI 97.9 4.7E-05 1.6E-09 58.5 8.5 59 16-91 107-168 (401)
68 3gyx_A Adenylylsulfate reducta 97.9 2E-05 6.7E-10 64.8 6.2 69 15-93 163-235 (662)
69 2e5v_A L-aspartate oxidase; ar 97.9 4.3E-05 1.5E-09 59.7 7.9 62 17-94 118-179 (472)
70 3cp8_A TRNA uridine 5-carboxym 97.9 5.5E-05 1.9E-09 62.3 8.6 63 13-92 112-175 (641)
71 1jnr_A Adenylylsulfate reducta 97.8 3.7E-05 1.3E-09 62.5 7.2 66 17-93 150-220 (643)
72 2bcg_G Secretory pathway GDP d 97.8 5.4E-05 1.9E-09 58.6 7.4 59 18-92 242-301 (453)
73 3lxd_A FAD-dependent pyridine 97.8 8.3E-05 2.9E-09 56.5 8.3 60 18-93 194-253 (415)
74 3fg2_P Putative rubredoxin red 97.8 8.3E-05 2.8E-09 56.4 8.2 59 18-92 184-242 (404)
75 2bry_A NEDD9 interacting prote 97.8 1.2E-05 4.3E-10 63.2 3.4 74 12-95 160-234 (497)
76 1d5t_A Guanine nucleotide diss 97.8 4.5E-05 1.5E-09 58.8 6.4 58 18-92 234-291 (433)
77 3c4a_A Probable tryptophan hyd 97.6 1.3E-05 4.3E-10 60.3 1.0 57 12-97 92-148 (381)
78 3nrn_A Uncharacterized protein 97.6 8.4E-05 2.9E-09 56.1 5.3 56 18-92 189-244 (421)
79 3gwf_A Cyclohexanone monooxyge 97.5 0.00053 1.8E-08 54.7 9.1 64 13-91 82-147 (540)
80 1n4w_A CHOD, cholesterol oxida 97.5 0.00011 3.8E-09 57.8 4.9 63 22-92 225-289 (504)
81 3ab1_A Ferredoxin--NADP reduct 97.4 0.0008 2.7E-08 49.5 8.5 62 15-92 71-132 (360)
82 1mo9_A ORF3; nucleotide bindin 97.4 0.00059 2E-08 53.7 8.1 60 19-93 256-318 (523)
83 1vg0_A RAB proteins geranylger 97.4 0.0012 4.1E-08 54.5 9.7 62 12-88 369-434 (650)
84 1q1r_A Putidaredoxin reductase 97.3 0.00063 2.2E-08 52.2 7.6 59 19-92 192-251 (431)
85 1coy_A Cholesterol oxidase; ox 97.3 0.00027 9.1E-09 55.7 5.4 66 19-92 227-294 (507)
86 3d1c_A Flavin-containing putat 97.3 0.00099 3.4E-08 48.8 7.5 59 15-91 85-143 (369)
87 1vdc_A NTR, NADPH dependent th 97.3 0.00082 2.8E-08 48.6 6.9 61 14-93 66-126 (333)
88 3iwa_A FAD-dependent pyridine 97.2 0.001 3.6E-08 51.2 7.8 58 18-92 202-259 (472)
89 3nks_A Protoporphyrinogen oxid 97.2 0.00045 1.6E-08 52.6 5.4 57 18-91 234-290 (477)
90 4ap3_A Steroid monooxygenase; 97.2 0.0012 4.1E-08 52.7 8.0 62 14-90 95-158 (549)
91 1kdg_A CDH, cellobiose dehydro 97.2 0.00044 1.5E-08 54.6 5.4 61 21-92 198-262 (546)
92 3ef6_A Toluene 1,2-dioxygenase 97.2 0.00055 1.9E-08 52.1 5.7 57 19-92 186-242 (410)
93 1w4x_A Phenylacetone monooxyge 97.2 0.0013 4.4E-08 52.0 8.0 63 14-91 90-154 (542)
94 1fl2_A Alkyl hydroperoxide red 97.2 0.001 3.5E-08 47.7 6.8 63 15-92 53-116 (310)
95 1trb_A Thioredoxin reductase; 97.2 0.0024 8.1E-08 45.8 8.7 63 19-92 185-248 (320)
96 2zbw_A Thioredoxin reductase; 97.2 0.0024 8.1E-08 46.2 8.7 60 15-91 62-121 (335)
97 2q0l_A TRXR, thioredoxin reduc 97.2 0.0013 4.6E-08 47.1 7.3 62 14-93 55-116 (311)
98 2v3a_A Rubredoxin reductase; a 97.1 0.002 6.8E-08 48.3 7.7 58 19-93 188-245 (384)
99 3o0h_A Glutathione reductase; 97.1 0.0015 5.2E-08 50.7 7.2 58 19-93 233-290 (484)
100 2cdu_A NADPH oxidase; flavoenz 97.1 0.0023 7.7E-08 49.1 8.0 58 19-93 192-249 (452)
101 2hqm_A GR, grase, glutathione 97.1 0.0015 5.3E-08 50.6 7.1 60 19-93 227-287 (479)
102 1m6i_A Programmed cell death p 97.0 0.0021 7.1E-08 50.3 7.7 58 18-92 226-283 (493)
103 3oc4_A Oxidoreductase, pyridin 97.0 0.0023 7.9E-08 49.1 7.8 56 19-92 190-245 (452)
104 3lzw_A Ferredoxin--NADP reduct 97.0 0.0032 1.1E-07 45.1 8.1 59 15-90 64-122 (332)
105 4dna_A Probable glutathione re 97.0 0.0018 6.2E-08 49.9 7.1 58 19-93 212-270 (463)
106 1fec_A Trypanothione reductase 97.0 0.0017 5.9E-08 50.6 7.0 59 19-93 232-290 (490)
107 2gv8_A Monooxygenase; FMO, FAD 97.0 0.002 6.9E-08 49.3 7.2 69 12-91 109-177 (447)
108 1xdi_A RV3303C-LPDA; reductase 97.0 0.0025 8.4E-08 49.6 7.8 58 19-93 224-281 (499)
109 3f8d_A Thioredoxin reductase ( 97.0 0.003 1E-07 44.9 7.6 60 15-92 67-126 (323)
110 2vvm_A Monoamine oxidase N; FA 97.0 0.0023 8E-08 49.2 7.5 58 17-91 254-312 (495)
111 2jbv_A Choline oxidase; alcoho 97.0 0.00043 1.5E-08 55.1 3.4 60 21-90 211-272 (546)
112 3uox_A Otemo; baeyer-villiger 97.0 0.0022 7.4E-08 51.2 7.3 64 13-91 82-147 (545)
113 2xve_A Flavin-containing monoo 97.0 0.0025 8.5E-08 49.5 7.5 68 14-91 97-166 (464)
114 1ges_A Glutathione reductase; 96.9 0.0021 7.1E-08 49.5 6.9 59 19-93 209-267 (450)
115 2wpf_A Trypanothione reductase 96.9 0.0024 8.2E-08 49.9 7.3 59 19-93 236-294 (495)
116 1ju2_A HydroxynitrIle lyase; f 96.9 0.00057 1.9E-08 54.3 3.5 57 24-91 200-261 (536)
117 2yqu_A 2-oxoglutarate dehydrog 96.9 0.0031 1.1E-07 48.3 7.4 59 18-93 208-266 (455)
118 3qvp_A Glucose oxidase; oxidor 96.9 0.001 3.5E-08 53.9 4.8 62 19-91 228-293 (583)
119 1zk7_A HGII, reductase, mercur 96.8 0.0052 1.8E-07 47.2 8.2 57 19-93 217-273 (467)
120 2q7v_A Thioredoxin reductase; 96.8 0.0029 1E-07 45.7 6.1 62 15-92 62-124 (325)
121 3g3e_A D-amino-acid oxidase; F 96.8 0.00025 8.6E-09 52.2 0.4 52 12-92 136-187 (351)
122 3cty_A Thioredoxin reductase; 96.8 0.0046 1.6E-07 44.6 7.1 60 22-92 194-253 (319)
123 3itj_A Thioredoxin reductase 1 96.7 0.0047 1.6E-07 44.3 7.0 60 22-92 212-272 (338)
124 2r9z_A Glutathione amide reduc 96.7 0.0049 1.7E-07 47.7 7.4 58 19-93 208-266 (463)
125 3cgb_A Pyridine nucleotide-dis 96.7 0.0071 2.4E-07 46.9 8.1 56 19-92 228-283 (480)
126 1c0p_A D-amino acid oxidase; a 96.7 0.00066 2.3E-08 50.1 2.1 51 12-92 136-186 (363)
127 1hyu_A AHPF, alkyl hydroperoxi 96.7 0.0032 1.1E-07 49.6 6.1 63 15-92 264-327 (521)
128 1gpe_A Protein (glucose oxidas 96.7 0.00081 2.8E-08 54.1 2.6 58 23-91 236-297 (587)
129 1onf_A GR, grase, glutathione 96.6 0.0089 3.1E-07 46.6 8.3 59 19-93 218-277 (500)
130 1v59_A Dihydrolipoamide dehydr 96.6 0.0073 2.5E-07 46.5 7.6 65 19-93 225-289 (478)
131 1fl2_A Alkyl hydroperoxide red 96.6 0.0048 1.6E-07 44.1 6.1 60 21-91 182-242 (310)
132 3ab1_A Ferredoxin--NADP reduct 96.5 0.0063 2.1E-07 44.7 6.6 62 19-92 203-264 (360)
133 3s5w_A L-ornithine 5-monooxyge 96.5 0.0033 1.1E-07 47.9 5.3 70 13-93 122-194 (463)
134 3cty_A Thioredoxin reductase; 96.5 0.0063 2.1E-07 43.8 6.4 59 15-92 69-127 (319)
135 3itj_A Thioredoxin reductase 1 96.5 0.0078 2.7E-07 43.1 6.9 63 15-92 81-143 (338)
136 1yvv_A Amine oxidase, flavin-c 96.5 0.0065 2.2E-07 43.8 6.3 46 32-94 119-165 (336)
137 3k7m_X 6-hydroxy-L-nicotine ox 96.5 0.0036 1.2E-07 47.0 5.1 52 20-89 206-257 (431)
138 2gqw_A Ferredoxin reductase; f 96.5 0.0081 2.8E-07 45.6 7.0 53 19-92 188-240 (408)
139 3r9u_A Thioredoxin reductase; 96.4 0.0074 2.5E-07 42.8 6.2 53 28-92 193-245 (315)
140 1trb_A Thioredoxin reductase; 96.4 0.0085 2.9E-07 42.9 6.4 60 15-93 59-118 (320)
141 3fim_B ARYL-alcohol oxidase; A 96.3 0.0032 1.1E-07 50.8 4.0 61 19-90 209-275 (566)
142 1nhp_A NADH peroxidase; oxidor 96.3 0.006 2E-07 46.6 5.3 57 18-92 191-247 (447)
143 3ntd_A FAD-dependent pyridine 96.3 0.016 5.6E-07 45.3 7.9 59 18-92 192-268 (565)
144 1zmd_A Dihydrolipoyl dehydroge 96.2 0.012 4.2E-07 45.2 6.9 64 19-93 221-284 (474)
145 1b37_A Protein (polyamine oxid 96.2 0.0068 2.3E-07 46.5 5.4 56 18-90 206-269 (472)
146 2a87_A TRXR, TR, thioredoxin r 96.2 0.0078 2.7E-07 43.8 5.3 60 15-93 68-128 (335)
147 2zbw_A Thioredoxin reductase; 96.2 0.027 9.1E-07 40.6 8.1 63 18-92 191-253 (335)
148 3q9t_A Choline dehydrogenase a 96.1 0.0054 1.9E-07 49.5 4.6 52 29-91 217-270 (577)
149 3qj4_A Renalase; FAD/NAD(P)-bi 96.1 0.014 4.8E-07 42.6 6.4 54 19-89 110-163 (342)
150 2qae_A Lipoamide, dihydrolipoy 96.1 0.023 8E-07 43.6 7.9 62 19-93 216-278 (468)
151 1s3e_A Amine oxidase [flavin-c 96.1 0.0079 2.7E-07 46.7 5.2 53 22-91 216-268 (520)
152 2bc0_A NADH oxidase; flavoprot 96.1 0.013 4.4E-07 45.5 6.4 57 19-93 237-293 (490)
153 4b63_A L-ornithine N5 monooxyg 96.0 0.0088 3E-07 46.9 5.3 72 11-92 138-215 (501)
154 1y56_A Hypothetical protein PH 96.0 0.006 2E-07 47.7 4.3 50 26-92 265-314 (493)
155 3fbs_A Oxidoreductase; structu 96.0 0.02 6.9E-07 40.2 6.6 61 15-93 53-114 (297)
156 3pl8_A Pyranose 2-oxidase; sub 95.9 0.0096 3.3E-07 48.3 4.9 53 31-93 273-326 (623)
157 3ics_A Coenzyme A-disulfide re 95.8 0.021 7E-07 45.2 6.6 57 18-93 228-284 (588)
158 3dgh_A TRXR-1, thioredoxin red 95.7 0.026 9E-07 43.5 6.8 63 19-92 228-290 (483)
159 1ebd_A E3BD, dihydrolipoamide 95.7 0.035 1.2E-06 42.5 7.2 60 19-92 212-271 (455)
160 3lad_A Dihydrolipoamide dehydr 95.7 0.045 1.5E-06 42.0 7.9 60 19-92 222-281 (476)
161 3h8l_A NADH oxidase; membrane 95.7 0.018 6.2E-07 43.2 5.6 54 18-92 218-271 (409)
162 3i6d_A Protoporphyrinogen oxid 95.6 0.014 4.8E-07 43.9 4.7 42 33-91 248-289 (470)
163 3urh_A Dihydrolipoyl dehydroge 95.6 0.072 2.5E-06 41.1 8.7 63 19-93 240-302 (491)
164 2yg5_A Putrescine oxidase; oxi 95.5 0.021 7.3E-07 43.1 5.5 47 27-90 221-267 (453)
165 2eq6_A Pyruvate dehydrogenase 95.5 0.06 2.1E-06 41.4 8.1 64 18-93 210-273 (464)
166 3dk9_A Grase, GR, glutathione 95.5 0.067 2.3E-06 41.1 8.3 66 19-92 229-294 (478)
167 2a8x_A Dihydrolipoyl dehydroge 95.5 0.057 2E-06 41.3 7.8 60 19-92 213-272 (464)
168 3f8d_A Thioredoxin reductase ( 95.4 0.048 1.7E-06 38.5 6.8 57 24-92 195-252 (323)
169 3t37_A Probable dehydrogenase; 95.4 0.018 6.3E-07 44.5 4.9 60 18-90 210-270 (526)
170 3s5w_A L-ornithine 5-monooxyge 95.4 0.076 2.6E-06 40.3 8.2 50 31-92 329-378 (463)
171 2ivd_A PPO, PPOX, protoporphyr 95.4 0.013 4.5E-07 44.5 3.8 62 13-91 230-294 (478)
172 1vdc_A NTR, NADPH dependent th 95.3 0.051 1.7E-06 39.0 6.7 60 22-92 198-260 (333)
173 3lov_A Protoporphyrinogen oxid 95.3 0.043 1.5E-06 41.7 6.6 62 12-91 227-289 (475)
174 2b9w_A Putative aminooxidase; 95.3 0.029 1E-06 42.0 5.6 53 21-91 206-258 (424)
175 2q0l_A TRXR, thioredoxin reduc 95.3 0.049 1.7E-06 38.7 6.6 60 22-92 182-242 (311)
176 1dxl_A Dihydrolipoamide dehydr 95.3 0.037 1.3E-06 42.3 6.2 62 19-92 219-280 (470)
177 2q7v_A Thioredoxin reductase; 95.2 0.058 2E-06 38.8 6.7 59 22-92 191-250 (325)
178 4g6h_A Rotenone-insensitive NA 95.1 0.047 1.6E-06 42.9 6.4 61 18-91 272-332 (502)
179 3lzw_A Ferredoxin--NADP reduct 95.1 0.046 1.6E-06 38.9 5.8 56 25-92 196-251 (332)
180 1xhc_A NADH oxidase /nitrite r 94.9 0.036 1.2E-06 41.5 5.0 53 19-93 184-236 (367)
181 3k30_A Histamine dehydrogenase 94.9 0.014 4.8E-07 47.4 2.8 56 21-92 570-625 (690)
182 3dgz_A Thioredoxin reductase 2 94.8 0.097 3.3E-06 40.4 7.3 64 19-93 226-289 (488)
183 1cjc_A Protein (adrenodoxin re 94.8 0.065 2.2E-06 41.6 6.3 66 20-92 245-334 (460)
184 1hyu_A AHPF, alkyl hydroperoxi 94.7 0.069 2.4E-06 41.9 6.4 59 22-91 394-453 (521)
185 3fbs_A Oxidoreductase; structu 94.6 0.041 1.4E-06 38.6 4.3 51 20-91 176-226 (297)
186 1ojt_A Surface protein; redox- 94.5 0.069 2.4E-06 41.2 5.9 62 19-93 227-288 (482)
187 3klj_A NAD(FAD)-dependent dehy 94.3 0.079 2.7E-06 40.1 5.6 49 24-91 68-116 (385)
188 4b1b_A TRXR, thioredoxin reduc 94.2 0.17 5.8E-06 40.4 7.7 57 20-93 265-321 (542)
189 3ic9_A Dihydrolipoamide dehydr 94.2 0.21 7.1E-06 38.8 7.9 60 19-92 216-275 (492)
190 4fk1_A Putative thioredoxin re 94.2 0.12 4.2E-06 37.0 6.2 61 16-92 58-118 (304)
191 1lvl_A Dihydrolipoamide dehydr 94.0 0.096 3.3E-06 40.2 5.7 58 19-93 213-270 (458)
192 1gte_A Dihydropyrimidine dehyd 93.8 0.11 3.8E-06 44.3 6.2 65 25-91 377-442 (1025)
193 4gde_A UDP-galactopyranose mut 93.8 0.038 1.3E-06 42.1 3.0 52 17-87 221-272 (513)
194 2a8x_A Dihydrolipoyl dehydroge 93.8 0.14 4.7E-06 39.2 6.2 56 20-93 93-148 (464)
195 1dxl_A Dihydrolipoamide dehydr 93.8 0.13 4.6E-06 39.2 6.0 54 22-93 100-153 (470)
196 3d1c_A Flavin-containing putat 93.7 0.23 7.7E-06 36.0 7.0 55 22-93 218-274 (369)
197 1rsg_A FMS1 protein; FAD bindi 93.7 0.15 5.2E-06 39.5 6.4 54 20-89 201-255 (516)
198 2jae_A L-amino acid oxidase; o 93.7 0.2 7E-06 38.1 7.0 49 28-90 246-295 (489)
199 1q1r_A Putidaredoxin reductase 93.7 0.07 2.4E-06 40.7 4.3 48 26-92 68-115 (431)
200 4gut_A Lysine-specific histone 93.5 0.14 4.8E-06 42.7 6.2 42 30-88 541-582 (776)
201 3r9u_A Thioredoxin reductase; 93.5 0.16 5.6E-06 35.7 5.8 59 15-91 59-118 (315)
202 1ebd_A E3BD, dihydrolipoamide 93.2 0.22 7.6E-06 37.9 6.5 53 21-93 94-147 (455)
203 1ojt_A Surface protein; redox- 93.1 0.18 6.2E-06 38.8 5.9 57 24-93 101-162 (482)
204 1v59_A Dihydrolipoamide dehydr 93.0 0.14 4.9E-06 39.2 5.2 51 24-92 102-158 (478)
205 3h28_A Sulfide-quinone reducta 92.9 0.2 7E-06 37.8 5.9 55 20-91 202-256 (430)
206 3kd9_A Coenzyme A disulfide re 92.9 0.18 6E-06 38.4 5.5 55 19-92 191-245 (449)
207 3hyw_A Sulfide-quinone reducta 92.9 0.18 6.3E-06 38.3 5.5 55 20-91 202-256 (430)
208 2gag_A Heterotetrameric sarcos 92.8 0.24 8.1E-06 42.0 6.6 61 25-92 323-384 (965)
209 1lqt_A FPRA; NADP+ derivative, 92.7 0.13 4.3E-06 39.9 4.4 63 21-92 249-327 (456)
210 2a87_A TRXR, TR, thioredoxin r 92.4 0.14 4.8E-06 37.0 4.1 57 24-92 196-253 (335)
211 4eqs_A Coenzyme A disulfide re 92.3 0.25 8.5E-06 37.8 5.6 51 20-91 190-240 (437)
212 3qfa_A Thioredoxin reductase 1 92.2 0.76 2.6E-05 35.9 8.4 64 19-92 251-316 (519)
213 2vdc_G Glutamate synthase [NAD 92.1 0.12 4.3E-06 40.1 3.8 65 25-91 309-378 (456)
214 3vrd_B FCCB subunit, flavocyto 91.9 0.064 2.2E-06 39.9 1.9 57 18-91 198-258 (401)
215 4a5l_A Thioredoxin reductase; 91.8 0.71 2.4E-05 32.5 7.2 59 15-91 63-121 (314)
216 3uox_A Otemo; baeyer-villiger 91.3 0.19 6.4E-06 39.9 4.0 46 24-91 344-391 (545)
217 2bc0_A NADH oxidase; flavoprot 91.3 0.3 1E-05 37.7 5.1 52 25-92 99-150 (490)
218 3ihm_A Styrene monooxygenase A 90.8 0.091 3.1E-06 40.0 1.7 54 12-94 116-170 (430)
219 3sx6_A Sulfide-quinone reducta 90.6 0.36 1.2E-05 36.6 4.9 51 22-92 63-113 (437)
220 1xhc_A NADH oxidase /nitrite r 90.3 0.23 7.8E-06 37.1 3.5 46 26-91 68-113 (367)
221 2x8g_A Thioredoxin glutathione 90.0 1.5 5.1E-05 34.6 8.2 62 19-92 327-396 (598)
222 4fk1_A Putative thioredoxin re 90.0 0.12 4E-06 37.1 1.7 57 20-93 182-238 (304)
223 1sez_A Protoporphyrinogen oxid 89.9 0.42 1.4E-05 36.5 4.8 61 20-90 242-307 (504)
224 2iid_A L-amino-acid oxidase; f 89.8 0.76 2.6E-05 35.0 6.2 56 19-90 242-297 (498)
225 1ps9_A 2,4-dienoyl-COA reducta 89.5 0.64 2.2E-05 37.5 5.8 52 22-92 577-629 (671)
226 2gqw_A Ferredoxin reductase; f 89.0 0.3 1E-05 36.8 3.3 47 27-92 68-114 (408)
227 3ef6_A Toluene 1,2-dioxygenase 88.9 0.51 1.7E-05 35.5 4.6 47 26-91 65-111 (410)
228 3l8k_A Dihydrolipoyl dehydroge 88.8 0.84 2.9E-05 34.9 5.8 50 32-93 225-274 (466)
229 2qae_A Lipoamide, dihydrolipoy 88.8 0.85 2.9E-05 34.8 5.8 52 23-92 98-149 (468)
230 3oc4_A Oxidoreductase, pyridin 88.7 0.6 2.1E-05 35.5 4.9 53 24-92 64-116 (452)
231 3gwf_A Cyclohexanone monooxyge 88.3 0.23 8E-06 39.3 2.4 42 30-92 342-385 (540)
232 1nhp_A NADH peroxidase; oxidor 88.2 0.65 2.2E-05 35.2 4.8 54 25-92 63-116 (447)
233 2cdu_A NADPH oxidase; flavoenz 88.1 0.57 2E-05 35.6 4.4 54 25-92 65-118 (452)
234 4eqs_A Coenzyme A disulfide re 87.9 0.59 2E-05 35.7 4.4 51 28-92 67-117 (437)
235 2v3a_A Rubredoxin reductase; a 87.8 0.83 2.8E-05 33.8 5.0 48 25-92 67-114 (384)
236 1xdi_A RV3303C-LPDA; reductase 87.7 1.3 4.3E-05 34.2 6.2 59 20-92 97-157 (499)
237 3cgb_A Pyridine nucleotide-dis 87.6 1 3.4E-05 34.7 5.6 54 25-92 99-153 (480)
238 1zmd_A Dihydrolipoyl dehydroge 87.4 1.3 4.5E-05 33.8 6.1 53 23-93 102-154 (474)
239 3ics_A Coenzyme A-disulfide re 87.2 0.84 2.9E-05 35.9 5.0 57 21-91 96-152 (588)
240 1y56_A Hypothetical protein PH 87.2 0.74 2.5E-05 35.7 4.6 61 16-91 159-219 (493)
241 3h8l_A NADH oxidase; membrane 86.9 0.55 1.9E-05 35.0 3.6 53 24-92 62-114 (409)
242 2yqu_A 2-oxoglutarate dehydrog 86.7 0.84 2.9E-05 34.7 4.6 48 24-92 95-142 (455)
243 2hqm_A GR, grase, glutathione 86.6 0.96 3.3E-05 34.8 4.9 55 20-92 107-161 (479)
244 1m6i_A Programmed cell death p 86.5 0.42 1.4E-05 37.1 2.9 45 29-92 101-145 (493)
245 3kd9_A Coenzyme A disulfide re 86.4 1.5 5E-05 33.2 5.8 44 29-91 70-114 (449)
246 3lxd_A FAD-dependent pyridine 86.2 0.94 3.2E-05 33.9 4.6 48 25-91 72-119 (415)
247 3l8k_A Dihydrolipoyl dehydroge 86.0 0.99 3.4E-05 34.5 4.7 50 22-91 93-144 (466)
248 3ntd_A FAD-dependent pyridine 84.9 1.2 4.2E-05 34.6 4.8 53 25-91 65-117 (565)
249 2eq6_A Pyruvate dehydrogenase 84.7 2 6.7E-05 32.8 5.9 46 25-93 100-145 (464)
250 3hyw_A Sulfide-quinone reducta 84.7 0.98 3.4E-05 34.2 4.1 44 28-91 66-109 (430)
251 3iwa_A FAD-dependent pyridine 84.2 0.98 3.4E-05 34.5 3.9 55 23-91 71-125 (472)
252 4ap3_A Steroid monooxygenase; 83.9 0.61 2.1E-05 37.0 2.7 41 30-92 355-397 (549)
253 2z3y_A Lysine-specific histone 83.7 2.9 0.0001 33.7 6.7 47 31-88 409-455 (662)
254 3sx6_A Sulfide-quinone reducta 82.4 5.4 0.00018 30.0 7.4 59 20-90 210-268 (437)
255 1o94_A Tmadh, trimethylamine d 82.2 0.77 2.6E-05 37.6 2.8 67 22-92 575-647 (729)
256 3h28_A Sulfide-quinone reducta 81.2 0.82 2.8E-05 34.5 2.4 48 25-92 63-110 (430)
257 1lvl_A Dihydrolipoamide dehydr 80.8 6.1 0.00021 30.0 7.2 46 24-92 102-147 (458)
258 3fg2_P Putative rubredoxin red 80.6 2.5 8.7E-05 31.4 5.0 47 25-91 64-110 (404)
259 4dsg_A UDP-galactopyranose mut 80.5 1.5 5E-05 34.0 3.7 54 17-91 215-270 (484)
260 3dgz_A Thioredoxin reductase 2 79.8 5.5 0.00019 30.5 6.7 50 25-92 111-160 (488)
261 3urh_A Dihydrolipoyl dehydroge 79.6 5.9 0.0002 30.3 6.8 51 23-91 120-170 (491)
262 2gag_A Heterotetrameric sarcos 79.3 3.3 0.00011 35.1 5.7 70 19-91 182-253 (965)
263 2xag_A Lysine-specific histone 79.2 4.8 0.00016 34.0 6.6 46 32-88 581-626 (852)
264 3dk9_A Grase, GR, glutathione 78.5 4 0.00014 31.1 5.5 52 20-92 110-161 (478)
265 1fec_A Trypanothione reductase 78.2 4.1 0.00014 31.4 5.6 53 23-92 108-164 (490)
266 3qfa_A Thioredoxin reductase 1 78.0 5.3 0.00018 31.0 6.2 49 26-92 138-186 (519)
267 2r9z_A Glutathione amide reduc 77.7 6 0.00021 30.1 6.3 48 22-92 96-143 (463)
268 3vrd_B FCCB subunit, flavocyto 77.1 4.4 0.00015 29.8 5.3 45 27-91 64-108 (401)
269 3klj_A NAD(FAD)-dependent dehy 76.8 0.77 2.6E-05 34.6 1.0 26 19-44 189-214 (385)
270 4b1b_A TRXR, thioredoxin reduc 76.2 5.9 0.0002 31.5 6.1 53 25-93 147-199 (542)
271 3dgh_A TRXR-1, thioredoxin red 75.4 6.4 0.00022 30.0 5.9 48 26-92 116-163 (483)
272 1w4x_A Phenylacetone monooxyge 75.3 3 0.0001 32.6 4.1 44 27-92 347-392 (542)
273 1ges_A Glutathione reductase; 75.1 8.3 0.00028 29.2 6.5 47 22-91 97-143 (450)
274 3lad_A Dihydrolipoamide dehydr 74.7 4.4 0.00015 30.7 4.8 50 25-92 106-155 (476)
275 4gcm_A TRXR, thioredoxin reduc 74.4 7.2 0.00024 27.4 5.6 57 16-91 60-116 (312)
276 4a5l_A Thioredoxin reductase; 73.9 14 0.00046 25.7 7.0 57 25-92 195-251 (314)
277 1zk7_A HGII, reductase, mercur 73.8 3.6 0.00012 31.2 4.2 48 26-91 102-150 (467)
278 3o0h_A Glutathione reductase; 72.3 8.3 0.00028 29.4 5.9 52 19-92 115-167 (484)
279 1onf_A GR, grase, glutathione 70.1 4.6 0.00016 31.1 4.0 60 22-93 93-155 (500)
280 2wpf_A Trypanothione reductase 69.5 7.2 0.00025 30.1 5.0 54 24-91 113-167 (495)
281 4dna_A Probable glutathione re 67.7 9.8 0.00033 28.8 5.4 53 19-92 94-146 (463)
282 4b63_A L-ornithine N5 monooxyg 67.3 9.3 0.00032 29.6 5.3 23 73-95 391-413 (501)
283 3ayj_A Pro-enzyme of L-phenyla 64.8 7.2 0.00025 32.4 4.4 57 18-87 347-410 (721)
284 4a9w_A Monooxygenase; baeyer-v 62.3 7 0.00024 27.5 3.4 18 75-92 269-286 (357)
285 2vdc_G Glutamate synthase [NAD 60.1 1.8 6.2E-05 33.4 -0.0 46 20-91 174-219 (456)
286 2x8g_A Thioredoxin glutathione 59.3 27 0.00092 27.3 6.6 17 76-92 246-262 (598)
287 2xve_A Flavin-containing monoo 52.0 21 0.00072 27.2 4.8 18 75-92 260-277 (464)
288 1gte_A Dihydropyrimidine dehyd 47.2 2.7 9.1E-05 35.8 -1.1 47 20-90 240-286 (1025)
289 1mo9_A ORF3; nucleotide bindin 45.2 28 0.00097 26.8 4.6 41 29-91 146-186 (523)
290 2jz7_A Selenium binding protei 41.1 10 0.00035 23.2 1.2 28 12-39 28-55 (81)
291 2o35_A Hypothetical protein DU 28.9 34 0.0012 21.9 2.2 19 17-35 45-63 (105)
292 1u07_A TONB protein; beta-hair 27.0 65 0.0022 18.8 3.2 30 27-59 17-46 (90)
293 2k9k_A TONB2; metal transport; 26.2 71 0.0024 19.1 3.4 30 27-59 32-61 (106)
294 3fyb_A Protein of unknown func 24.8 33 0.0011 21.8 1.6 20 17-36 44-63 (104)
295 3dtg_A Branched-chain amino ac 24.1 81 0.0028 23.7 3.9 19 83-101 335-353 (372)
296 1vl4_A PMBA-related protein; s 22.0 2.3E+02 0.0078 21.5 6.2 45 13-58 11-58 (447)
297 3ir9_A Peptide chain release f 21.6 86 0.003 21.0 3.3 25 12-36 113-137 (166)
298 1y6u_A XIS, excisionase from t 21.0 23 0.00078 20.6 0.2 18 8-25 48-65 (70)
No 1
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.58 E-value=9.2e-15 Score=117.73 Aligned_cols=95 Identities=77% Similarity=1.319 Sum_probs=85.1
Q ss_pred CCCCCcEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEe
Q psy9487 7 MNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFA 86 (101)
Q Consensus 7 ~~~~~~~~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A 86 (101)
+.+.++|+++|..|++||.++|+++||+|+++++|++++.+++++|+||.+.+.|.+++|+++++|++|.+++|+.||+|
T Consensus 133 ~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~A 212 (584)
T 2gmh_A 133 MNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFA 212 (584)
T ss_dssp TCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEEC
T ss_pred cccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEe
Confidence 45667899999999999999999999999999999999997557899999987777778888888999999999999999
Q ss_pred ecCCchhhHHHhhhC
Q psy9487 87 EGCHGHLTKSLSSRF 101 (101)
Q Consensus 87 ~G~~s~l~~~l~~~~ 101 (101)
+|++|.++++|..+|
T Consensus 213 dG~~S~vr~~l~~~~ 227 (584)
T 2gmh_A 213 EGCHGHLAKQLYKKF 227 (584)
T ss_dssp CCTTCHHHHHHHHHT
T ss_pred eCCCchHHHHHHHHh
Confidence 999999999886543
No 2
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.26 E-value=3.9e-11 Score=88.56 Aligned_cols=77 Identities=23% Similarity=0.357 Sum_probs=66.1
Q ss_pred CCCcEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeec
Q psy9487 9 NHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEG 88 (101)
Q Consensus 9 ~~~~~~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G 88 (101)
+..+|+++|..|+++|+++|++.|++++.+++|+++..+ +++++++.... +++ ..+++|++||.|||
T Consensus 93 ~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~-~~~~~~v~~~~-----~~~-------~~~~~a~~vIgAdG 159 (397)
T 3oz2_A 93 NEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKE-NGKVAGAKIRH-----NNE-------IVDVRAKMVIAADG 159 (397)
T ss_dssp CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEE-TTEEEEEEEEE-----TTE-------EEEEEEEEEEECCC
T ss_pred CceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeec-cceeeeeeecc-----ccc-------ceEEEEeEEEeCCc
Confidence 334899999999999999999999999999999999986 78888887654 111 35799999999999
Q ss_pred CCchhhHHHh
Q psy9487 89 CHGHLTKSLS 98 (101)
Q Consensus 89 ~~s~l~~~l~ 98 (101)
++|.+++++.
T Consensus 160 ~~S~vr~~~g 169 (397)
T 3oz2_A 160 FESEFGRWAG 169 (397)
T ss_dssp TTCHHHHHHT
T ss_pred cccHHHHHcC
Confidence 9999988763
No 3
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.10 E-value=4e-10 Score=83.97 Aligned_cols=74 Identities=23% Similarity=0.331 Sum_probs=65.1
Q ss_pred CcEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCC
Q psy9487 11 GNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 90 (101)
Q Consensus 11 ~~~~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~ 90 (101)
.+|+++|..|+++|.++|++.|++|+.+++|+++..+ ++++.||.+.+.+ + +.+++|++||+|+|.+
T Consensus 95 ~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~-----~-------~~~~~a~~vV~A~G~~ 161 (397)
T 3cgv_A 95 VGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKE-NGKVAGAKIRHNN-----E-------IVDVRAKMVIAADGFE 161 (397)
T ss_dssp CEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEE-TTEEEEEEEEETT-----E-------EEEEEEEEEEECCCTT
T ss_pred eeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEe-CCEEEEEEEEECC-----e-------EEEEEcCEEEECCCcc
Confidence 4899999999999999999999999999999999986 7889889885311 0 4689999999999999
Q ss_pred chhhHHH
Q psy9487 91 GHLTKSL 97 (101)
Q Consensus 91 s~l~~~l 97 (101)
|.+.+++
T Consensus 162 s~~~~~~ 168 (397)
T 3cgv_A 162 SEFGRWA 168 (397)
T ss_dssp CHHHHHH
T ss_pred hHhHHhc
Confidence 9998876
No 4
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.00 E-value=1.4e-09 Score=84.11 Aligned_cols=76 Identities=21% Similarity=0.289 Sum_probs=63.9
Q ss_pred cEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 12 NYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 12 ~~~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
+++++|..|+++|.++|++.|++|+++++|+++..+ +++++||.+.+. .+|+ ..+++|++||+|+|.+|
T Consensus 94 ~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~---~~G~-------~~~~~ad~VV~AdG~~s 162 (453)
T 3atr_A 94 GFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFE-DGYVKGAVLFNR---RTNE-------ELTVYSKVVVEATGYSR 162 (453)
T ss_dssp EEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEE-TTEEEEEEEEET---TTTE-------EEEEECSEEEECCGGGC
T ss_pred cEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEE-CCEEEEEEEEEc---CCCc-------eEEEEcCEEEECcCCch
Confidence 689999999999999999999999999999999985 778888887531 0222 13799999999999999
Q ss_pred hhhHHHh
Q psy9487 92 HLTKSLS 98 (101)
Q Consensus 92 ~l~~~l~ 98 (101)
.+.+++.
T Consensus 163 ~vr~~l~ 169 (453)
T 3atr_A 163 SFRSKLP 169 (453)
T ss_dssp TTGGGSC
T ss_pred hhHHhcC
Confidence 9987653
No 5
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.98 E-value=1.2e-09 Score=82.52 Aligned_cols=75 Identities=23% Similarity=0.334 Sum_probs=61.1
Q ss_pred CcEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCC
Q psy9487 11 GNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 90 (101)
Q Consensus 11 ~~~~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~ 90 (101)
.+|.++|..|+++|.++|++.|++|+++++|+++..++++.++.|++.+ |+. .+++|+.||+|+|.+
T Consensus 99 ~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~------g~~-------~~~~a~~vV~A~G~~ 165 (421)
T 3nix_A 99 WTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDIN------GNK-------REIEARFIIDASGYG 165 (421)
T ss_dssp CEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETT------SCE-------EEEEEEEEEECCGGG
T ss_pred ceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCC------CCE-------EEEEcCEEEECCCCc
Confidence 4799999999999999999999999999999999986444445555543 211 379999999999999
Q ss_pred chhhHHHh
Q psy9487 91 GHLTKSLS 98 (101)
Q Consensus 91 s~l~~~l~ 98 (101)
|.+.+.+.
T Consensus 166 s~l~~~~g 173 (421)
T 3nix_A 166 RVIPRMFG 173 (421)
T ss_dssp CHHHHHTT
T ss_pred hhhHHhcC
Confidence 98877653
No 6
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.96 E-value=1.9e-09 Score=84.86 Aligned_cols=75 Identities=19% Similarity=0.291 Sum_probs=65.4
Q ss_pred CcEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCC
Q psy9487 11 GNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 90 (101)
Q Consensus 11 ~~~~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~ 90 (101)
.+|.++|..|+++|.+.|++.|++|+++++|+++..+ ++++.+|.+.. .+|+. .+++|++||+|+|.+
T Consensus 104 ~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~-~~~v~gv~~~~----~dG~~-------~~i~ad~VI~AdG~~ 171 (512)
T 3e1t_A 104 FAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFE-GERAVGVRYRN----TEGVE-------LMAHARFIVDASGNR 171 (512)
T ss_dssp CEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEE-TTEEEEEEEEC----SSSCE-------EEEEEEEEEECCCTT
T ss_pred eeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEE-CCEEEEEEEEe----CCCCE-------EEEEcCEEEECCCcc
Confidence 4789999999999999999999999999999999985 78898888764 23321 489999999999999
Q ss_pred chhhHHH
Q psy9487 91 GHLTKSL 97 (101)
Q Consensus 91 s~l~~~l 97 (101)
|.+.+++
T Consensus 172 S~vr~~l 178 (512)
T 3e1t_A 172 TRVSQAV 178 (512)
T ss_dssp CSSGGGT
T ss_pred hHHHHHc
Confidence 9998776
No 7
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.87 E-value=5.2e-09 Score=81.70 Aligned_cols=70 Identities=23% Similarity=0.257 Sum_probs=61.6
Q ss_pred CcEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCC
Q psy9487 11 GNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 90 (101)
Q Consensus 11 ~~~~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~ 90 (101)
.+|.++|..|+++|.++|++.|++++.+ +|+++..++++.+++|++.+ |.++.|+.||+|+|.+
T Consensus 166 ~~~~~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~---------------g~~~~ad~vV~A~G~~ 229 (511)
T 2weu_A 166 YAYHFDADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQ---------------HGEISGDLFVDCTGFR 229 (511)
T ss_dssp CEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESS---------------SCEEECSEEEECCGGG
T ss_pred eeEEEcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECC---------------CCEEEcCEEEECCCcc
Confidence 4799999999999999999999999999 99999885567888888865 4579999999999999
Q ss_pred chhhHH
Q psy9487 91 GHLTKS 96 (101)
Q Consensus 91 s~l~~~ 96 (101)
|.+.++
T Consensus 230 S~~~~~ 235 (511)
T 2weu_A 230 GLLINQ 235 (511)
T ss_dssp CCCCCC
T ss_pred hHHHHH
Confidence 988543
No 8
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.84 E-value=8e-09 Score=77.82 Aligned_cols=70 Identities=16% Similarity=0.172 Sum_probs=60.7
Q ss_pred cEEEEhHHHHHHHHHHHHHC-CCEEecCCceeEEEEecCCcEE-EEEeccccccCCCCCCcCCCCCeEEEccEEEEeecC
Q psy9487 12 NYVVRLGHVVKWLGEQAEAM-GVEIYPGIPASEVLYHGDGSVK-GIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGC 89 (101)
Q Consensus 12 ~~~v~r~~~d~~l~~~A~~~-Gv~i~~gt~v~~i~~~~~g~v~-GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~ 89 (101)
++.++|..|.++|.+++++. |++|+.+++|+++..+ ++.++ .|.+.+ |.+++|++||+|+|.
T Consensus 101 ~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~-~~~v~g~v~~~~---------------g~~~~ad~vV~AdG~ 164 (399)
T 2x3n_A 101 FILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRD-ERHAIDQVRLND---------------GRVLRPRVVVGADGI 164 (399)
T ss_dssp EEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEEC-TTSCEEEEEETT---------------SCEEEEEEEEECCCT
T ss_pred cccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEc-CCceEEEEEECC---------------CCEEECCEEEECCCC
Confidence 68999999999999999998 9999999999999885 55554 566654 458999999999999
Q ss_pred CchhhHHH
Q psy9487 90 HGHLTKSL 97 (101)
Q Consensus 90 ~s~l~~~l 97 (101)
+|.+.+++
T Consensus 165 ~s~vr~~l 172 (399)
T 2x3n_A 165 ASYVRRRL 172 (399)
T ss_dssp TCHHHHHT
T ss_pred ChHHHHHh
Confidence 99997765
No 9
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.80 E-value=1.8e-08 Score=81.55 Aligned_cols=75 Identities=19% Similarity=0.267 Sum_probs=64.4
Q ss_pred CcEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCC
Q psy9487 11 GNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 90 (101)
Q Consensus 11 ~~~~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~ 90 (101)
.+|.++|..|+++|.+.|++.||+++++++|+++..+ ++.+++|.+.+ +|+ ..+++|+.||+|+|.+
T Consensus 121 ~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~-~g~~~~V~~~~-----~G~-------~~~i~AdlVV~AdG~~ 187 (591)
T 3i3l_A 121 HAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLS-DPDRVVLTVRR-----GGE-------SVTVESDFVIDAGGSG 187 (591)
T ss_dssp CEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECC-STTCEEEEEEE-----TTE-------EEEEEESEEEECCGGG
T ss_pred eeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEc-CCCEEEEEEec-----CCc-------eEEEEcCEEEECCCCc
Confidence 4789999999999999999999999999999999885 67788888863 111 1579999999999999
Q ss_pred chhhHHHh
Q psy9487 91 GHLTKSLS 98 (101)
Q Consensus 91 s~l~~~l~ 98 (101)
|.+.+++.
T Consensus 188 S~lr~~lg 195 (591)
T 3i3l_A 188 GPISRKLG 195 (591)
T ss_dssp CHHHHHHT
T ss_pred chhHHHcC
Confidence 99988763
No 10
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.77 E-value=4.4e-08 Score=74.57 Aligned_cols=64 Identities=22% Similarity=0.333 Sum_probs=56.9
Q ss_pred EEEEhHHHHHHHHHHHHHCCCEEecCC---ceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecC
Q psy9487 13 YVVRLGHVVKWLGEQAEAMGVEIYPGI---PASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGC 89 (101)
Q Consensus 13 ~~v~r~~~d~~l~~~A~~~Gv~i~~gt---~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~ 89 (101)
..++-..+.+.|.+.|+++||+|++++ +|++|..+ +++++||++.+ |.+++|+.||+|+|+
T Consensus 156 g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~-~~~v~gV~t~~---------------G~~i~Ad~VV~AtG~ 219 (438)
T 3dje_A 156 GWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFE-NNDVKGAVTAD---------------GKIWRAERTFLCAGA 219 (438)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEE-TTEEEEEEETT---------------TEEEECSEEEECCGG
T ss_pred EEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEec-CCeEEEEEECC---------------CCEEECCEEEECCCC
Confidence 455667899999999999999999999 99999986 78999999976 568999999999999
Q ss_pred Cch
Q psy9487 90 HGH 92 (101)
Q Consensus 90 ~s~ 92 (101)
|+.
T Consensus 220 ~s~ 222 (438)
T 3dje_A 220 SAG 222 (438)
T ss_dssp GGG
T ss_pred Chh
Confidence 985
No 11
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.74 E-value=2.5e-08 Score=79.25 Aligned_cols=68 Identities=19% Similarity=0.254 Sum_probs=60.5
Q ss_pred CcEEEEhHHHHHHHHHHHHHC-CCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecC
Q psy9487 11 GNYVVRLGHVVKWLGEQAEAM-GVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGC 89 (101)
Q Consensus 11 ~~~~v~r~~~d~~l~~~A~~~-Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~ 89 (101)
.+|.++|..|.++|.+.|++. ||+++++ +|+++..++++.+++|++.+ |.++.|+.||+|+|.
T Consensus 187 ~~~~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~---------------G~~i~ad~vI~A~G~ 250 (550)
T 2e4g_A 187 YAWHFDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTAT---------------GRVFDADLFVDCSGF 250 (550)
T ss_dssp CEEEECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETT---------------SCEEECSEEEECCGG
T ss_pred cceEEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECC---------------CCEEECCEEEECCCC
Confidence 378999999999999999999 9999999 99999886567888898865 467999999999999
Q ss_pred Cchhh
Q psy9487 90 HGHLT 94 (101)
Q Consensus 90 ~s~l~ 94 (101)
+|.+.
T Consensus 251 ~S~~~ 255 (550)
T 2e4g_A 251 RGLLI 255 (550)
T ss_dssp GCCCC
T ss_pred chhhH
Confidence 99884
No 12
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.72 E-value=3.1e-08 Score=78.13 Aligned_cols=66 Identities=18% Similarity=0.317 Sum_probs=58.4
Q ss_pred cEEEEhHHHHHHHHHHHHH-CCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCC
Q psy9487 12 NYVVRLGHVVKWLGEQAEA-MGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 90 (101)
Q Consensus 12 ~~~v~r~~~d~~l~~~A~~-~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~ 90 (101)
+|.++|..|++.|.++|++ .||+++.+ +|+++..++++.+++|.+.+ |.++.|+.||+|+|.+
T Consensus 169 ~~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~---------------g~~i~ad~vV~AdG~~ 232 (526)
T 2pyx_A 169 GYHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQ---------------NGEISGQLFIDCTGAK 232 (526)
T ss_dssp EEEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESS---------------SCEEECSEEEECSGGG
T ss_pred eEEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECC---------------CCEEEcCEEEECCCcc
Confidence 6899999999999999999 99999999 59999886456777888754 3569999999999999
Q ss_pred chh
Q psy9487 91 GHL 93 (101)
Q Consensus 91 s~l 93 (101)
|.+
T Consensus 233 S~~ 235 (526)
T 2pyx_A 233 SLL 235 (526)
T ss_dssp CCC
T ss_pred hHH
Confidence 988
No 13
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.71 E-value=6.3e-08 Score=73.19 Aligned_cols=69 Identities=14% Similarity=0.084 Sum_probs=59.5
Q ss_pred CCcEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecC
Q psy9487 10 HGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGC 89 (101)
Q Consensus 10 ~~~~~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~ 89 (101)
..++.++|..|+++|.+.+++ ++|+.+++|+++..+ ++.+. |.+.+ |.++.|++||+|||.
T Consensus 119 ~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~-~~~v~-v~~~~---------------g~~~~a~~vV~AdG~ 179 (407)
T 3rp8_A 119 SRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEED-ADGVT-VWFTD---------------GSSASGDLLIAADGS 179 (407)
T ss_dssp SCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEE-TTEEE-EEETT---------------SCEEEESEEEECCCT
T ss_pred CceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEec-CCcEE-EEEcC---------------CCEEeeCEEEECCCc
Confidence 357999999999999999988 999999999999986 45443 66654 468999999999999
Q ss_pred CchhhHHH
Q psy9487 90 HGHLTKSL 97 (101)
Q Consensus 90 ~s~l~~~l 97 (101)
+|.+++++
T Consensus 180 ~S~vr~~l 187 (407)
T 3rp8_A 180 HSALRPWV 187 (407)
T ss_dssp TCSSHHHH
T ss_pred ChHHHHHh
Confidence 99998887
No 14
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.70 E-value=3e-08 Score=78.31 Aligned_cols=69 Identities=22% Similarity=0.259 Sum_probs=60.6
Q ss_pred CcEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCC
Q psy9487 11 GNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 90 (101)
Q Consensus 11 ~~~~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~ 90 (101)
.++.++|..|.+.|.+.|++.|++++.+ +|+++..++++.+++|.+.+ |.++.|+.||+|+|.+
T Consensus 158 ~~~~i~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~---------------g~~i~ad~vV~A~G~~ 221 (538)
T 2aqj_A 158 HAWHFDAHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKE---------------GRTLEADLFIDCSGMR 221 (538)
T ss_dssp CEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETT---------------SCEECCSEEEECCGGG
T ss_pred ccEEEeHHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECC---------------CcEEEeCEEEECCCCc
Confidence 4799999999999999999999999999 89999886566788888765 4579999999999999
Q ss_pred chhhH
Q psy9487 91 GHLTK 95 (101)
Q Consensus 91 s~l~~ 95 (101)
|.+.+
T Consensus 222 s~~~~ 226 (538)
T 2aqj_A 222 GLLIN 226 (538)
T ss_dssp CCCCC
T ss_pred hhhHH
Confidence 98843
No 15
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.68 E-value=1e-07 Score=75.27 Aligned_cols=73 Identities=16% Similarity=0.192 Sum_probs=60.4
Q ss_pred cEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 12 NYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 12 ~~~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
++.+.+..+.+.|.+++++.|++|+.+++|+++..+ ++.|. |.+.+ .+| ..+++|++||.|||++|
T Consensus 100 ~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~-~~~v~-v~~~~----~~g--------~~~~~a~~vVgADG~~S 165 (500)
T 2qa1_A 100 AKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDD-GAGVT-VEVRG----PEG--------KHTLRAAYLVGCDGGRS 165 (500)
T ss_dssp EEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEE-TTEEE-EEEEE----TTE--------EEEEEESEEEECCCTTC
T ss_pred eeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEc-CCeEE-EEEEc----CCC--------CEEEEeCEEEECCCcch
Confidence 689999999999999999999999999999999886 45444 66544 111 14799999999999999
Q ss_pred hhhHHHh
Q psy9487 92 HLTKSLS 98 (101)
Q Consensus 92 ~l~~~l~ 98 (101)
.+.+++-
T Consensus 166 ~VR~~lg 172 (500)
T 2qa1_A 166 SVRKAAG 172 (500)
T ss_dssp HHHHHTT
T ss_pred HHHHHcC
Confidence 9988763
No 16
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.67 E-value=1e-07 Score=75.17 Aligned_cols=73 Identities=18% Similarity=0.188 Sum_probs=60.5
Q ss_pred cEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 12 NYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 12 ~~~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
++.+.+..+.+.|.++|++.|++|+.+++|+++..+ ++.|. |.+.+ .+|+ .+++|++||.|||++|
T Consensus 101 ~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~-~~~v~-v~~~~----~~g~--------~~~~a~~vVgADG~~S 166 (499)
T 2qa2_A 101 VKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDE-GDHVV-VEVEG----PDGP--------RSLTTRYVVGCDGGRS 166 (499)
T ss_dssp EEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEEC-SSCEE-EEEEC----SSCE--------EEEEEEEEEECCCTTC
T ss_pred eEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEe-CCEEE-EEEEc----CCCc--------EEEEeCEEEEccCccc
Confidence 689999999999999999999999999999999886 44544 66544 1111 4799999999999999
Q ss_pred hhhHHHh
Q psy9487 92 HLTKSLS 98 (101)
Q Consensus 92 ~l~~~l~ 98 (101)
.+.++|-
T Consensus 167 ~VR~~lg 173 (499)
T 2qa2_A 167 TVRKAAG 173 (499)
T ss_dssp HHHHHTT
T ss_pred HHHHHcC
Confidence 9988763
No 17
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.66 E-value=1.3e-07 Score=69.87 Aligned_cols=67 Identities=12% Similarity=0.002 Sum_probs=56.3
Q ss_pred cEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 12 NYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 12 ~~~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
+..++...+.++|++.|+++|++|+++++|++|..+ +++ ++|++.+ .+++|+.||+|+|+|+
T Consensus 148 ~~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~-~~~-~~V~t~~----------------g~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 148 GADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRV-DGA-WEVRCDA----------------GSYRAAVLVNAAGAWC 209 (381)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEE-TTE-EEEECSS----------------EEEEESEEEECCGGGH
T ss_pred CceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEe-CCe-EEEEeCC----------------CEEEcCEEEECCChhH
Confidence 456788899999999999999999999999999986 455 6688764 4799999999999998
Q ss_pred h-hhHH
Q psy9487 92 H-LTKS 96 (101)
Q Consensus 92 ~-l~~~ 96 (101)
. +.+.
T Consensus 210 ~~l~~~ 215 (381)
T 3nyc_A 210 DAIAGL 215 (381)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 4 4444
No 18
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.65 E-value=8.4e-08 Score=75.47 Aligned_cols=64 Identities=23% Similarity=0.314 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEcc-EEEEeecCCchhh
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAK-VTIFAEGCHGHLT 94 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~-~VI~A~G~~s~l~ 94 (101)
.+.+.|.+.+++.|++|+++++|++|+.+++++|+||++.+. ++ ...|+|+ .||+|+|.++...
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~-----g~-------~~~i~A~k~VVlAtGG~~~n~ 267 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQY-----GK-------EVAVRARRGVVLATGSFAYND 267 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEET-----TE-------EEEEEEEEEEEECCCCCTTCH
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEEC-----Cc-------EEEEEeCCeEEEeCCChhhCH
Confidence 788999999999999999999999999964689999998641 11 1479995 9999999999763
No 19
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.65 E-value=1.3e-07 Score=70.89 Aligned_cols=68 Identities=22% Similarity=0.231 Sum_probs=58.6
Q ss_pred CcEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCC
Q psy9487 11 GNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 90 (101)
Q Consensus 11 ~~~~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~ 90 (101)
..+.++|..|.+.|.+.+++.|++|+.+++|+++.. ++ .|.+.+ |.++.|+.||+|+|.+
T Consensus 100 ~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~---~v~~~~---------------g~~~~ad~vV~AdG~~ 159 (379)
T 3alj_A 100 PWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP--VG---RLTLQT---------------GEVLEADLIVGADGVG 159 (379)
T ss_dssp CEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--TT---EEEETT---------------SCEEECSEEEECCCTT
T ss_pred ceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC---EEEECC---------------CCEEEcCEEEECCCcc
Confidence 478999999999999999999999999999999965 34 466644 4579999999999999
Q ss_pred chhhHHHh
Q psy9487 91 GHLTKSLS 98 (101)
Q Consensus 91 s~l~~~l~ 98 (101)
|.+.+++.
T Consensus 160 s~vr~~l~ 167 (379)
T 3alj_A 160 SKVRDSIG 167 (379)
T ss_dssp CHHHHHHC
T ss_pred HHHHHHhc
Confidence 99987763
No 20
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.64 E-value=9.5e-08 Score=75.16 Aligned_cols=77 Identities=22% Similarity=0.166 Sum_probs=60.9
Q ss_pred CCCcEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcE--EEEEeccccccCCCCCCcCCCCCeEEEccEEEEe
Q psy9487 9 NHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSV--KGIATGDVGIAKDGSPKDTFARGMELHAKVTIFA 86 (101)
Q Consensus 9 ~~~~~~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v--~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A 86 (101)
+...+.+++..|.+.|.++|++.|++|+.+++|+++..++++++ +.|.+.+ .++ ..+++|++||+|
T Consensus 111 ~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~----~~~--------~~~i~a~~vV~A 178 (535)
T 3ihg_A 111 PAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAG----PDG--------EYDLRAGYLVGA 178 (535)
T ss_dssp SCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEE----TTE--------EEEEEEEEEEEC
T ss_pred CCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEc----CCC--------eEEEEeCEEEEC
Confidence 34478899999999999999999999999999999998643222 2244443 111 168999999999
Q ss_pred ecCCchhhHHH
Q psy9487 87 EGCHGHLTKSL 97 (101)
Q Consensus 87 ~G~~s~l~~~l 97 (101)
||++|.++++|
T Consensus 179 dG~~S~vR~~l 189 (535)
T 3ihg_A 179 DGNRSLVRESL 189 (535)
T ss_dssp CCTTCHHHHHT
T ss_pred CCCcchHHHHc
Confidence 99999998877
No 21
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.63 E-value=7.8e-08 Score=76.63 Aligned_cols=67 Identities=19% Similarity=0.206 Sum_probs=56.3
Q ss_pred EhHHHHHHHHHHHHHCCCEEecCCceeEEEEecC-CcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchhh
Q psy9487 16 RLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGD-GSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLT 94 (101)
Q Consensus 16 ~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~-g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l~ 94 (101)
....+.+.|.+++++.||+|+++++|++++.+ + ++|+||++.+ .+|+. ..|+|+.||+|+|.++.+.
T Consensus 248 ~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~-~~g~v~Gv~~~~----~~g~~-------~~i~A~~VVlAtGg~s~~~ 315 (566)
T 1qo8_A 248 SGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVN-DDHSVVGAVVHG----KHTGY-------YMIGAKSVVLATGGYGMNK 315 (566)
T ss_dssp HHHHHHHHHHHHHHHTTCCEECSEEEEEEEEC-TTSBEEEEEEEE----TTTEE-------EEEEEEEEEECCCCCTTCH
T ss_pred CHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEC-CCCcEEEEEEEe----CCCcE-------EEEEcCEEEEecCCcccCH
Confidence 36678899999999999999999999999986 6 8999999864 22221 3799999999999999883
No 22
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.63 E-value=2.1e-07 Score=69.21 Aligned_cols=67 Identities=10% Similarity=0.138 Sum_probs=57.4
Q ss_pred EEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch-
Q psy9487 14 VVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH- 92 (101)
Q Consensus 14 ~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~- 92 (101)
.++...+.+.|.+.+++.|++|+++++|+++..+ ++++.+|++.+ .+++|+.||+|+|+|+.
T Consensus 145 ~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~-~~~v~gv~~~~----------------g~i~a~~VV~A~G~~s~~ 207 (382)
T 1y56_B 145 KADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIE-NNEIKGVKTNK----------------GIIKTGIVVNATNAWANL 207 (382)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEETT----------------EEEECSEEEECCGGGHHH
T ss_pred eECHHHHHHHHHHHHHHCCCEEECCceEEEEEEE-CCEEEEEEECC----------------cEEECCEEEECcchhHHH
Confidence 4678899999999999999999999999999985 67888898864 37999999999999984
Q ss_pred hhHHH
Q psy9487 93 LTKSL 97 (101)
Q Consensus 93 l~~~l 97 (101)
+.+.+
T Consensus 208 l~~~~ 212 (382)
T 1y56_B 208 INAMA 212 (382)
T ss_dssp HHHHH
T ss_pred HHHHc
Confidence 44443
No 23
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.62 E-value=1.4e-07 Score=69.12 Aligned_cols=71 Identities=20% Similarity=0.160 Sum_probs=56.0
Q ss_pred cEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 12 NYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 12 ~~~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
...++...+.+.|.+.+++.|++|+++++|+++..+ ++.++.|.+.+ |+ ..+++|+.||+|+|+|+
T Consensus 144 ~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~-~~~~~~v~~~~------g~-------~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 144 TGIVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVR-PEGGFELDFGG------AE-------PMTLSCRVLINAAGLHA 209 (369)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEC-TTSSEEEEECT------TS-------CEEEEEEEEEECCGGGH
T ss_pred CEEECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEc-CCceEEEEECC------Cc-------eeEEEeCEEEECCCcch
Confidence 345778899999999999999999999999999986 44434477654 21 15899999999999998
Q ss_pred -hhhHH
Q psy9487 92 -HLTKS 96 (101)
Q Consensus 92 -~l~~~ 96 (101)
.|.++
T Consensus 210 ~~l~~~ 215 (369)
T 3dme_A 210 PGLARR 215 (369)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 34443
No 24
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.61 E-value=1.7e-07 Score=68.59 Aligned_cols=85 Identities=18% Similarity=0.298 Sum_probs=63.5
Q ss_pred CCCCCCCCcEEE--EhHHHHHHHHHHHHH-CCCEEecCCceeEEEEecCCcEEEEEeccc----c--ccCCCCCCcCCCC
Q psy9487 4 GMPMNNHGNYVV--RLGHVVKWLGEQAEA-MGVEIYPGIPASEVLYHGDGSVKGIATGDV----G--IAKDGSPKDTFAR 74 (101)
Q Consensus 4 ~~~~~~~~~~~v--~r~~~d~~l~~~A~~-~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~----g--~~~~g~~~~~~~~ 74 (101)
|.++...+.|.+ ++..+.++|.+++.+ .|++++++++|+++..+ ++++.+|.+... . ...++++
T Consensus 103 G~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~-~~~v~gv~~~~~~~~~~~~~g~~g~~------ 175 (284)
T 1rp0_A 103 GVAYDEQDTYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GNRVGGVVTNWALVAQNHHTQSCMDP------ 175 (284)
T ss_dssp TCCCEECSSEEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEE-TTEEEEEEEEEHHHHTCTTTSSCCCC------
T ss_pred CCCcccCCCEEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEec-CCeEEEEEEeccccccccCccccCce------
Confidence 555655566766 778899999999976 69999999999999986 688889887520 0 0011222
Q ss_pred CeEEEccEEEEeecCCchhhHH
Q psy9487 75 GMELHAKVTIFAEGCHGHLTKS 96 (101)
Q Consensus 75 g~~i~A~~VI~A~G~~s~l~~~ 96 (101)
.+++|+.||+|+|..|.+...
T Consensus 176 -~~i~ad~VV~AtG~~s~~~~~ 196 (284)
T 1rp0_A 176 -NVMEAKIVVSSCGHDGPFGAT 196 (284)
T ss_dssp -EEEEEEEEEECCCSSSTTTTH
T ss_pred -EEEECCEEEECCCCchHHHHH
Confidence 679999999999998877543
No 25
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.61 E-value=8.2e-08 Score=72.00 Aligned_cols=72 Identities=21% Similarity=0.146 Sum_probs=58.6
Q ss_pred CcEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEe-ccccccCCCCCCcCCCCCe--EEEccEEEEee
Q psy9487 11 GNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIAT-GDVGIAKDGSPKDTFARGM--ELHAKVTIFAE 87 (101)
Q Consensus 11 ~~~~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~-~~~g~~~~g~~~~~~~~g~--~i~A~~VI~A~ 87 (101)
.++.+.+..+.+.|.+++++.|++|+.+++|+++..+ ++..+.|.+ .+ |. +++|++||+||
T Consensus 96 ~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~-~~~~~~v~~~~~---------------g~~~~~~a~~vV~Ad 159 (394)
T 1k0i_A 96 TVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDL-QGERPYVTFERD---------------GERLRLDCDYIAGCD 159 (394)
T ss_dssp CEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECT-TSSSCEEEEEET---------------TEEEEEECSEEEECC
T ss_pred ceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEe-cCCceEEEEecC---------------CcEEEEEeCEEEECC
Confidence 4688899999999999999999999999999999864 322234665 33 33 79999999999
Q ss_pred cCCchhhHHHh
Q psy9487 88 GCHGHLTKSLS 98 (101)
Q Consensus 88 G~~s~l~~~l~ 98 (101)
|.+|.+.+++.
T Consensus 160 G~~S~vr~~l~ 170 (394)
T 1k0i_A 160 GFHGISRQSIP 170 (394)
T ss_dssp CTTCSTGGGSC
T ss_pred CCCcHHHHhcC
Confidence 99999977653
No 26
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.61 E-value=1.3e-07 Score=75.28 Aligned_cols=67 Identities=25% Similarity=0.247 Sum_probs=55.6
Q ss_pred hHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchhh
Q psy9487 17 LGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLT 94 (101)
Q Consensus 17 r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l~ 94 (101)
...+.+.|.+++++.||+|+++++|++|+.+++++|+||.+.+ .+|+. ..|+|+.||+|+|.++...
T Consensus 254 g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~----~~g~~-------~~i~a~~VVlAtGg~~~n~ 320 (571)
T 1y0p_A 254 GAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKG----MYKGY-------YWVKADAVILATGGFAKNN 320 (571)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEE----TTTEE-------EEEECSEEEECCCCCTTCH
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEe----CCCcE-------EEEECCeEEEeCCCcccCH
Confidence 4678899999999999999999999999986338999998864 12221 3799999999999999864
No 27
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.58 E-value=3.6e-07 Score=70.66 Aligned_cols=64 Identities=22% Similarity=0.331 Sum_probs=55.2
Q ss_pred cEEEE----hHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEee
Q psy9487 12 NYVVR----LGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAE 87 (101)
Q Consensus 12 ~~~v~----r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~ 87 (101)
+++.. ...+.+.|.+++++.||+|+++++|+++..+ ++++++|++.+ |.+++|+.||+|+
T Consensus 124 g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~-~~~v~~V~~~~---------------G~~i~Ad~VVlAt 187 (447)
T 2i0z_A 124 GRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYE-NGQTKAVILQT---------------GEVLETNHVVIAV 187 (447)
T ss_dssp GEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETT---------------CCEEECSCEEECC
T ss_pred CEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEec-CCcEEEEEECC---------------CCEEECCEEEECC
Confidence 45554 5678889999999999999999999999985 78888998865 4569999999999
Q ss_pred cCCc
Q psy9487 88 GCHG 91 (101)
Q Consensus 88 G~~s 91 (101)
|.+|
T Consensus 188 Gg~s 191 (447)
T 2i0z_A 188 GGKS 191 (447)
T ss_dssp CCSS
T ss_pred CCCc
Confidence 9999
No 28
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.56 E-value=2e-07 Score=74.59 Aligned_cols=66 Identities=20% Similarity=0.221 Sum_probs=54.8
Q ss_pred hHHHHHHHHHHHHHCCCEEecCCceeEEEEecC-CcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchhh
Q psy9487 17 LGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGD-GSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLT 94 (101)
Q Consensus 17 r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~-g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l~ 94 (101)
...+.+.|.+++++.||+|+++++|++|+.+ + ++|+||++.+ .+|+. ..|+|+.||+|+|.++.+.
T Consensus 254 g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~-~~g~v~GV~~~~----~~G~~-------~~i~A~~VVlAtGg~~~~~ 320 (572)
T 1d4d_A 254 GAHVAQVLWDNAVKRGTDIRLNSRVVRILED-ASGKVTGVLVKG----EYTGY-------YVIKADAVVIAAGGFAKNN 320 (572)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEC---CCEEEEEEEE----TTTEE-------EEEECSEEEECCCCCTTCH
T ss_pred HHHHHHHHHHHHHHcCCeEEecCEEEEEEEC-CCCeEEEEEEEe----CCCcE-------EEEEcCEEEEeCCCCccCH
Confidence 4578899999999999999999999999986 6 8999999864 12221 4799999999999999873
No 29
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.54 E-value=2.4e-07 Score=71.26 Aligned_cols=96 Identities=16% Similarity=0.258 Sum_probs=66.8
Q ss_pred CCCCCCCCcEEEEh--HHHHHHHHHHHHH-CCCEEecCCceeEEEEecC----------------C--cEEEEEeccccc
Q psy9487 4 GMPMNNHGNYVVRL--GHVVKWLGEQAEA-MGVEIYPGIPASEVLYHGD----------------G--SVKGIATGDVGI 62 (101)
Q Consensus 4 ~~~~~~~~~~~v~r--~~~d~~l~~~A~~-~Gv~i~~gt~v~~i~~~~~----------------g--~v~GV~~~~~g~ 62 (101)
|.++...++|...+ ..+.+.|.+++++ .|++++.++.|.+++.+++ + +|.||.+...-.
T Consensus 144 Gv~~~~~G~~~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v 223 (344)
T 3jsk_A 144 GVPYEDEGDYVVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLV 223 (344)
T ss_dssp TCCCEECSSEEEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHH
T ss_pred CCcccccCCeEEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeee
Confidence 45565556666554 6777999999998 5999999999999998642 3 899998853211
Q ss_pred cCCCCCCcCCCCCeEEEccEEEEeecCCchhhHHHhhh
Q psy9487 63 AKDGSPKDTFARGMELHAKVTIFAEGCHGHLTKSLSSR 100 (101)
Q Consensus 63 ~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l~~~l~~~ 100 (101)
..++...... ...+|+|++||+|+|..+++.+.+.++
T Consensus 224 ~~~g~~~~~~-d~~~i~Ak~VV~ATG~~s~v~~~~~~~ 260 (344)
T 3jsk_A 224 SMHHDDQSAM-DPNTINAPVIISTTGHDGPFGAFSVKR 260 (344)
T ss_dssp HTTSSSSSCC-BCEEEECSEEEECCCSSSSSSCHHHHH
T ss_pred eccCCccccc-CceEEEcCEEEECCCCCchhhHHHHHH
Confidence 1222111111 136899999999999999976555443
No 30
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.51 E-value=1.5e-07 Score=75.62 Aligned_cols=72 Identities=17% Similarity=0.217 Sum_probs=59.6
Q ss_pred CcEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCC-eEEEccEEEEeecC
Q psy9487 11 GNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARG-MELHAKVTIFAEGC 89 (101)
Q Consensus 11 ~~~~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g-~~i~A~~VI~A~G~ 89 (101)
.++.+.+..+.+.|.+++++.|++|+.+++|+++..+ ++.+. |.+.+ .+ | .+++|++||+|||+
T Consensus 141 ~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~-~~~v~-v~~~~----~~---------G~~~~~a~~vV~ADG~ 205 (570)
T 3fmw_A 141 YTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQD-AEAVE-VTVAG----PS---------GPYPVRARYGVGCDGG 205 (570)
T ss_dssp SBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBC-SSCEE-EEEEE----TT---------EEEEEEESEEEECSCS
T ss_pred eeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEc-CCeEE-EEEEe----CC---------CcEEEEeCEEEEcCCC
Confidence 3788999999999999999999999999999999875 44443 55532 01 3 58999999999999
Q ss_pred CchhhHHH
Q psy9487 90 HGHLTKSL 97 (101)
Q Consensus 90 ~s~l~~~l 97 (101)
+|.+.+++
T Consensus 206 ~S~vR~~l 213 (570)
T 3fmw_A 206 RSTVRRLA 213 (570)
T ss_dssp SCHHHHHT
T ss_pred CchHHHHc
Confidence 99998776
No 31
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.51 E-value=3.7e-07 Score=70.41 Aligned_cols=61 Identities=11% Similarity=0.122 Sum_probs=51.3
Q ss_pred hHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 17 LGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 17 r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
...+-+.|++.++++|++|+++++|++|+.+ +++++||++.+ |.++.||.||.+..++..+
T Consensus 220 ~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~-~~~~~gV~~~~---------------g~~~~ad~VV~~a~~~~~~ 280 (501)
T 4dgk_A 220 TGALVQGMIKLFQDLGGEVVLNARVSHMETT-GNKIEAVHLED---------------GRRFLTQAVASNADVVHTY 280 (501)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETT---------------SCEEECSCEEECCC-----
T ss_pred CcchHHHHHHHHHHhCCceeeecceeEEEee-CCeEEEEEecC---------------CcEEEcCEEEECCCHHHHH
Confidence 3578888999999999999999999999996 89999999987 6799999999998877654
No 32
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.48 E-value=4.3e-07 Score=67.78 Aligned_cols=67 Identities=24% Similarity=0.361 Sum_probs=55.9
Q ss_pred EEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc-h
Q psy9487 14 VVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG-H 92 (101)
Q Consensus 14 ~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s-~ 92 (101)
.++-..+.+.|.+.+++.|++|+++++|+++..+ ++++++|++.+ | +++|+.||+|+|+++ .
T Consensus 170 ~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~-~~~~~~v~~~~---------------g-~~~a~~vV~a~G~~s~~ 232 (405)
T 2gag_B 170 IAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKD-GEKVTGVKTTR---------------G-TIHAGKVALAGAGHSSV 232 (405)
T ss_dssp BCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEETT---------------C-CEEEEEEEECCGGGHHH
T ss_pred cCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEe-CCEEEEEEeCC---------------c-eEECCEEEECCchhHHH
Confidence 3455688899999999999999999999999985 67888898864 3 699999999999998 4
Q ss_pred hhHHH
Q psy9487 93 LTKSL 97 (101)
Q Consensus 93 l~~~l 97 (101)
+.+.+
T Consensus 233 l~~~~ 237 (405)
T 2gag_B 233 LAEMA 237 (405)
T ss_dssp HHHHH
T ss_pred HHHHc
Confidence 55443
No 33
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.46 E-value=8e-07 Score=67.80 Aligned_cols=96 Identities=14% Similarity=0.251 Sum_probs=65.2
Q ss_pred CCCCCCCCCcEEEE--hHHHHHHHHHHHHHC-CCEEecCCceeEEEEec--C-C--cEEEEEeccccccCCCCCCcCCCC
Q psy9487 3 FGMPMNNHGNYVVR--LGHVVKWLGEQAEAM-GVEIYPGIPASEVLYHG--D-G--SVKGIATGDVGIAKDGSPKDTFAR 74 (101)
Q Consensus 3 ~~~~~~~~~~~~v~--r~~~d~~l~~~A~~~-Gv~i~~gt~v~~i~~~~--~-g--~v~GV~~~~~g~~~~g~~~~~~~~ 74 (101)
+|.++...+.|.+. ...+.+.|.+++++. |++++.++.|.+++.++ + + +|.||.+.......++...... .
T Consensus 129 ~Gv~~~~~g~~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~-d 207 (326)
T 2gjc_A 129 LEIPYEDEGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCM-D 207 (326)
T ss_dssp TTCCCEECSSEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCC-C
T ss_pred hCcccccCCCeEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceecc-C
Confidence 45666666666665 466788889999885 99999999999999863 3 5 9999988532222222110011 1
Q ss_pred CeEEEc---------------cEEEEeecCCchhhHHHhh
Q psy9487 75 GMELHA---------------KVTIFAEGCHGHLTKSLSS 99 (101)
Q Consensus 75 g~~i~A---------------~~VI~A~G~~s~l~~~l~~ 99 (101)
...|.| ++||+|+|..+++.+.+..
T Consensus 208 ~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~~~ 247 (326)
T 2gjc_A 208 PNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFCAK 247 (326)
T ss_dssp CEEEEESCCCSSSCCCSSTTCCEEEECCCCC--CCSHHHH
T ss_pred ceEEEEeeccccccccccccCCEEEECcCCCchHHHHHHh
Confidence 367999 9999999999998776654
No 34
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.46 E-value=4.2e-07 Score=69.45 Aligned_cols=69 Identities=19% Similarity=0.215 Sum_probs=56.6
Q ss_pred cEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEe--------------cCCcEEEEEeccccccCCCCCCcCCCCCeE
Q psy9487 12 NYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYH--------------GDGSVKGIATGDVGIAKDGSPKDTFARGME 77 (101)
Q Consensus 12 ~~~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~--------------~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~ 77 (101)
...++-..+.+.|.+.+++.|++|+++++|+++..+ +++++++|++.+ | +
T Consensus 175 ~~~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~---------------g-~ 238 (448)
T 3axb_A 175 AGFLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSD---------------G-T 238 (448)
T ss_dssp EEECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETT---------------S-C
T ss_pred CeEEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCC---------------C-E
Confidence 344677799999999999999999999999999872 256788888754 3 5
Q ss_pred E--EccEEEEeecCCch-hhHH
Q psy9487 78 L--HAKVTIFAEGCHGH-LTKS 96 (101)
Q Consensus 78 i--~A~~VI~A~G~~s~-l~~~ 96 (101)
+ +|+.||+|+|+|+. +.+.
T Consensus 239 i~~~Ad~VV~AtG~~s~~l~~~ 260 (448)
T 3axb_A 239 RVEVGEKLVVAAGVWSNRLLNP 260 (448)
T ss_dssp EEEEEEEEEECCGGGHHHHHGG
T ss_pred EeecCCEEEECCCcCHHHHHHH
Confidence 8 99999999999986 5444
No 35
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.45 E-value=1.1e-06 Score=65.98 Aligned_cols=67 Identities=18% Similarity=0.170 Sum_probs=53.5
Q ss_pred cEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 12 NYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 12 ~~~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
+..++...+.+.|.+.|++.|++|+++++|+++..+ ++.+. |++.+ .+++|+.||+|+|+|+
T Consensus 147 ~g~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~-~~~v~-v~t~~----------------g~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 147 GGTIDVRGTLAALFTLAQAAGATLRAGETVTELVPD-ADGVS-VTTDR----------------GTYRAGKVVLACGPYT 208 (397)
T ss_dssp CEEEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEEE-TTEEE-EEESS----------------CEEEEEEEEECCGGGH
T ss_pred CCEEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEEc-CCeEE-EEECC----------------CEEEcCEEEEcCCcCh
Confidence 346677889999999999999999999999999885 45543 65542 4799999999999995
Q ss_pred h-hhHH
Q psy9487 92 H-LTKS 96 (101)
Q Consensus 92 ~-l~~~ 96 (101)
. +.+.
T Consensus 209 ~~l~~~ 214 (397)
T 2oln_A 209 NDLLEP 214 (397)
T ss_dssp HHHHGG
T ss_pred HHHhhh
Confidence 4 4444
No 36
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.44 E-value=4e-07 Score=67.60 Aligned_cols=67 Identities=24% Similarity=0.221 Sum_probs=55.9
Q ss_pred EEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 13 YVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 13 ~~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
..++...+.+.|.+.+++.|++|+++++|+++..+ ++++ +|.+.+ .+++|+.||+|+|.++.
T Consensus 159 ~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~-~~~~-~v~~~~----------------g~~~a~~vV~A~G~~s~ 220 (382)
T 1ryi_A 159 VHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERD-GEAL-FIKTPS----------------GDVWANHVVVASGVWSG 220 (382)
T ss_dssp CBCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECS-SSSE-EEEETT----------------EEEEEEEEEECCGGGTH
T ss_pred eEEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEE-CCEE-EEEcCC----------------ceEEcCEEEECCChhHH
Confidence 44567889999999999999999999999999875 5666 777754 37999999999999986
Q ss_pred -hhHHH
Q psy9487 93 -LTKSL 97 (101)
Q Consensus 93 -l~~~l 97 (101)
+.+.+
T Consensus 221 ~l~~~~ 226 (382)
T 1ryi_A 221 MFFKQL 226 (382)
T ss_dssp HHHHHT
T ss_pred HHHHhc
Confidence 55543
No 37
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.41 E-value=1.2e-06 Score=64.86 Aligned_cols=68 Identities=16% Similarity=0.148 Sum_probs=55.1
Q ss_pred cEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 12 NYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 12 ~~~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
.+.++|..|.++|.+. .+..|..+++++++..++++.|. |.+.+ |.+++|++||.|||++|
T Consensus 106 ~~~i~R~~L~~~L~~~---~~~~v~~~~~v~~~~~~~~~~v~-v~~~d---------------G~~~~adlvVgADG~~S 166 (412)
T 4hb9_A 106 RLSISRTELKEILNKG---LANTIQWNKTFVRYEHIENGGIK-IFFAD---------------GSHENVDVLVGADGSNS 166 (412)
T ss_dssp EEEEEHHHHHHHHHTT---CTTTEECSCCEEEEEECTTSCEE-EEETT---------------SCEEEESEEEECCCTTC
T ss_pred ceEeeHHHHHHHHHhh---ccceEEEEEEEEeeeEcCCCeEE-EEECC---------------CCEEEeeEEEECCCCCc
Confidence 5789999999998764 45679999999999875455543 66655 57899999999999999
Q ss_pred hhhHHHh
Q psy9487 92 HLTKSLS 98 (101)
Q Consensus 92 ~l~~~l~ 98 (101)
.+.++|.
T Consensus 167 ~vR~~l~ 173 (412)
T 4hb9_A 167 KVRKQYL 173 (412)
T ss_dssp HHHHHHS
T ss_pred chHHHhC
Confidence 9988773
No 38
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.40 E-value=9.2e-07 Score=71.62 Aligned_cols=81 Identities=10% Similarity=0.070 Sum_probs=61.0
Q ss_pred CcEEEEhHHHHHHHHHHHHHCCC--EEecCCceeEEEEecC--CcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEe
Q psy9487 11 GNYVVRLGHVVKWLGEQAEAMGV--EIYPGIPASEVLYHGD--GSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFA 86 (101)
Q Consensus 11 ~~~~v~r~~~d~~l~~~A~~~Gv--~i~~gt~v~~i~~~~~--g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A 86 (101)
..+.+++..+.++|.+++++.|+ +|+.+++|+++..+++ +..+.|.+.+.+...+|+ ..+++|++||.|
T Consensus 134 ~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~-------~~~i~a~~vVgA 206 (639)
T 2dkh_A 134 PHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQ-------IETVQARYVVGC 206 (639)
T ss_dssp CEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTC-------EEEEEEEEEEEC
T ss_pred ceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCC-------eEEEEeCEEEEC
Confidence 46789999999999999999998 9999999999998632 223446554200001222 157999999999
Q ss_pred ecCCchhhHHHh
Q psy9487 87 EGCHGHLTKSLS 98 (101)
Q Consensus 87 ~G~~s~l~~~l~ 98 (101)
||++|.++++|-
T Consensus 207 DG~~S~vR~~lg 218 (639)
T 2dkh_A 207 DGARSNVRRAIG 218 (639)
T ss_dssp CCTTCHHHHHTT
T ss_pred CCcchHHHHHhC
Confidence 999999987763
No 39
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.37 E-value=9.5e-07 Score=70.73 Aligned_cols=68 Identities=18% Similarity=0.155 Sum_probs=57.7
Q ss_pred EEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 14 VVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 14 ~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
.++-..+...|++.|++.|++|+++++|+++..+ ++++++|++.+. .+|+ +.+|+|+.||+|+|+|+.
T Consensus 166 ~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~-~g~v~gV~~~d~---~tg~-------~~~i~A~~VV~AaG~~s~ 233 (561)
T 3da1_A 166 RTDDARLTLEIMKEAVARGAVALNYMKVESFIYD-QGKVVGVVAKDR---LTDT-------THTIYAKKVVNAAGPWVD 233 (561)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEE-TTEEEEEEEEET---TTCC-------EEEEEEEEEEECCGGGHH
T ss_pred eEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEc-CCeEEEEEEEEc---CCCc-------eEEEECCEEEECCCcchH
Confidence 5667889999999999999999999999999996 789999998751 1232 268999999999999984
No 40
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.37 E-value=4.9e-07 Score=68.81 Aligned_cols=66 Identities=20% Similarity=0.230 Sum_probs=50.5
Q ss_pred cEEEEhHHHHHHHHHHHHHCCCEEecCCcee---------EEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccE
Q psy9487 12 NYVVRLGHVVKWLGEQAEAMGVEIYPGIPAS---------EVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKV 82 (101)
Q Consensus 12 ~~~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~---------~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~ 82 (101)
...++...+.++|.+.+++.|++|+++++|+ ++..+ ++++ +|++.+ .+++|+.
T Consensus 166 ~g~v~~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~-~~~v-~v~~~~----------------g~i~a~~ 227 (405)
T 3c4n_A 166 ALTYRPGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVT-NTHQ-IVVHET----------------RQIRAGV 227 (405)
T ss_dssp CEEECHHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC---------CBCC----------------EEEEEEE
T ss_pred CEEEcHHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEee-CCeE-EEEECC----------------cEEECCE
Confidence 3456788899999999999999999999999 88764 5565 676643 4799999
Q ss_pred EEEeecCCc-hhhH
Q psy9487 83 TIFAEGCHG-HLTK 95 (101)
Q Consensus 83 VI~A~G~~s-~l~~ 95 (101)
||+|+|+|+ .+.+
T Consensus 228 VV~A~G~~s~~l~~ 241 (405)
T 3c4n_A 228 IIVAAGAAGPALVE 241 (405)
T ss_dssp EEECCGGGHHHHHH
T ss_pred EEECCCccHHHHHH
Confidence 999999998 5655
No 41
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.35 E-value=1.2e-06 Score=62.13 Aligned_cols=60 Identities=17% Similarity=0.200 Sum_probs=51.5
Q ss_pred EhHHHHHHHHHHHHHC-CCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 16 RLGHVVKWLGEQAEAM-GVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 16 ~r~~~d~~l~~~A~~~-Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
++..+.++|.+.+++. |++++. ++|+++..+ ++++++|.+.+ |.+++|+.||+|+|.++.
T Consensus 66 ~~~~~~~~l~~~~~~~~gv~i~~-~~v~~i~~~-~~~v~~v~~~~---------------g~~i~a~~VV~A~G~~s~ 126 (232)
T 2cul_A 66 RVWAFHARAKYLLEGLRPLHLFQ-ATATGLLLE-GNRVVGVRTWE---------------GPPARGEKVVLAVGSFLG 126 (232)
T ss_dssp CHHHHHHHHHHHHHTCTTEEEEE-CCEEEEEEE-TTEEEEEEETT---------------SCCEECSEEEECCTTCSS
T ss_pred CHHHHHHHHHHHHHcCCCcEEEE-eEEEEEEEe-CCEEEEEEECC---------------CCEEECCEEEECCCCChh
Confidence 6778999999999997 999994 799999985 67888888764 457999999999999765
No 42
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.33 E-value=2.4e-06 Score=70.80 Aligned_cols=65 Identities=20% Similarity=0.283 Sum_probs=56.9
Q ss_pred cEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 12 NYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 12 ~~~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
...++...+.++|++.|++.|++|+++++|++|..+ ++++++|.+.+ .+++|+.||+|+|+|+
T Consensus 145 ~g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~-~~~v~~V~t~~----------------G~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 145 DGLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQS-GGRVTGVQTAD----------------GVIPADIVVSCAGFWG 207 (830)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETT----------------EEEECSEEEECCGGGH
T ss_pred CceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEe-CCEEEEEEECC----------------cEEECCEEEECCccch
Confidence 345588899999999999999999999999999985 67888898864 4799999999999998
Q ss_pred hh
Q psy9487 92 HL 93 (101)
Q Consensus 92 ~l 93 (101)
..
T Consensus 208 ~~ 209 (830)
T 1pj5_A 208 AK 209 (830)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 43
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.32 E-value=2.5e-06 Score=69.18 Aligned_cols=64 Identities=14% Similarity=0.101 Sum_probs=54.6
Q ss_pred cEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 12 NYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 12 ~~~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
+..++...+.+.|.+.|++.|++|+++++|++|..+ +++ ++|++.+ |.++.|+.||+|+|.++
T Consensus 411 ~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~-~~~-v~V~t~~---------------G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 411 GGWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRK-DDC-WLLNFAG---------------DQQATHSVVVLANGHQI 473 (676)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEE-TTE-EEEEETT---------------SCEEEESEEEECCGGGG
T ss_pred CeeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEe-CCe-EEEEECC---------------CCEEECCEEEECCCcch
Confidence 455677899999999999999999999999999986 555 4677754 45799999999999998
Q ss_pred h
Q psy9487 92 H 92 (101)
Q Consensus 92 ~ 92 (101)
.
T Consensus 474 ~ 474 (676)
T 3ps9_A 474 S 474 (676)
T ss_dssp G
T ss_pred h
Confidence 6
No 44
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.31 E-value=4.1e-06 Score=61.88 Aligned_cols=63 Identities=22% Similarity=0.187 Sum_probs=52.0
Q ss_pred cEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 12 NYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 12 ~~~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
...++...+.++|.+.+++.|++|+++++|+++..+ ++. +.|++.+ .+++|+.||+|+|+|+
T Consensus 143 ~g~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~-~~~-~~v~~~~----------------g~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 143 SGFLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHD-DDG-VTIETAD----------------GEYQAKKAIVCAGTWV 204 (372)
T ss_dssp CEEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEEC-SSS-EEEEESS----------------CEEEEEEEEECCGGGG
T ss_pred CcEEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEc-CCE-EEEEECC----------------CeEEcCEEEEcCCccH
Confidence 345677889999999999999999999999999985 445 3466653 3599999999999987
Q ss_pred h
Q psy9487 92 H 92 (101)
Q Consensus 92 ~ 92 (101)
.
T Consensus 205 ~ 205 (372)
T 2uzz_A 205 K 205 (372)
T ss_dssp G
T ss_pred H
Confidence 4
No 45
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.29 E-value=2.8e-06 Score=68.50 Aligned_cols=66 Identities=21% Similarity=0.290 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 18 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 18 ~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
..+.+.|.+++++.|++|++++.|++++.+++++|.||.+.+. .+|+. ..|+|+.||+|+|.++.+
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~---~~g~~-------~~i~A~~VVlAtGg~~~~ 208 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCI---ETGEV-------VYFKARATVLATGGAGRI 208 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEET---TTCCE-------EEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEc---CCCeE-------EEEEcCEEEECCCCCccc
Confidence 4678889999999999999999999999853689999987531 12321 479999999999999865
No 46
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.25 E-value=5.2e-06 Score=66.95 Aligned_cols=60 Identities=18% Similarity=0.351 Sum_probs=53.6
Q ss_pred hHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 17 LGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 17 r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
...+.+.|.+.+++.|++|+++++|+++..+ ++++.+|.+.+ |.++.|+.||+|+|.++.
T Consensus 219 ~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~-~~~v~gV~l~~---------------G~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 219 LVTMIEKMRATIIELGGEIRFSTRVDDLHME-DGQITGVTLSN---------------GEEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSCCEEEEEES-SSBEEEEEETT---------------SCEEECSCEEECCCTTCH
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCEEEEEEEe-CCEEEEEEECC---------------CCEEECCEEEECCCCChh
Confidence 4677888899999999999999999999985 78899999875 568999999999999996
No 47
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.25 E-value=6.7e-06 Score=60.94 Aligned_cols=62 Identities=21% Similarity=0.172 Sum_probs=51.7
Q ss_pred EEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 13 YVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 13 ~~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
..++...+.+.|.+.+++.|++|+++++|+++..+ ++.+ .|++.+ .+++|+.||+|+|+|+.
T Consensus 145 ~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~-~~~~-~v~~~~----------------g~~~a~~vV~A~G~~~~ 206 (389)
T 2gf3_A 145 GVLFSENCIRAYRELAEARGAKVLTHTRVEDFDIS-PDSV-KIETAN----------------GSYTADKLIVSMGAWNS 206 (389)
T ss_dssp EEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEEC-SSCE-EEEETT----------------EEEEEEEEEECCGGGHH
T ss_pred cEEeHHHHHHHHHHHHHHCCCEEEcCcEEEEEEec-CCeE-EEEeCC----------------CEEEeCEEEEecCccHH
Confidence 45677899999999999999999999999999985 4443 466643 47999999999999875
No 48
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.24 E-value=7e-06 Score=61.90 Aligned_cols=66 Identities=17% Similarity=0.043 Sum_probs=54.4
Q ss_pred EEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 14 VVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 14 ~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
.+.+..+.+.|.+.+ .|++|+.+++|+++..+ ++.+. |.+.+ |.++.|++||+|||.+|.+
T Consensus 95 ~~~~~~l~~~L~~~~--~~~~i~~~~~v~~i~~~-~~~v~-v~~~~---------------g~~~~ad~vV~AdG~~S~v 155 (397)
T 2vou_A 95 FTSYDSIYGGLYELF--GPERYHTSKCLVGLSQD-SETVQ-MRFSD---------------GTKAEANWVIGADGGASVV 155 (397)
T ss_dssp EEEHHHHHHHHHHHH--CSTTEETTCCEEEEEEC-SSCEE-EEETT---------------SCEEEESEEEECCCTTCHH
T ss_pred ccCHHHHHHHHHHhC--CCcEEEcCCEEEEEEec-CCEEE-EEECC---------------CCEEECCEEEECCCcchhH
Confidence 577889999988776 59999999999999885 45544 66654 4679999999999999999
Q ss_pred hHHHh
Q psy9487 94 TKSLS 98 (101)
Q Consensus 94 ~~~l~ 98 (101)
.+++.
T Consensus 156 r~~~~ 160 (397)
T 2vou_A 156 RKRLL 160 (397)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 88764
No 49
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.22 E-value=5.4e-06 Score=62.76 Aligned_cols=74 Identities=22% Similarity=0.327 Sum_probs=57.4
Q ss_pred cEEEEhHHHHHHHHHHHHH-CC-CEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecC
Q psy9487 12 NYVVRLGHVVKWLGEQAEA-MG-VEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGC 89 (101)
Q Consensus 12 ~~~v~r~~~d~~l~~~A~~-~G-v~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~ 89 (101)
.+.++|..|+++|.+++++ .| ++|+.+++|+++.. +++ +. |.+.+. .+|+. .+++|++||+|||.
T Consensus 101 ~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~-v~-v~~~~~---~~g~~-------~~~~ad~vV~AdG~ 167 (410)
T 3c96_A 101 QYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDG-RV-LIGARD---GHGKP-------QALGADVLVGADGI 167 (410)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETT-EE-EEEEEE---TTSCE-------EEEEESEEEECCCT
T ss_pred eeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCc-cE-EEEecC---CCCCc-------eEEecCEEEECCCc
Confidence 5899999999999999987 47 58999999999987 344 33 444320 11221 57999999999999
Q ss_pred CchhhHHHh
Q psy9487 90 HGHLTKSLS 98 (101)
Q Consensus 90 ~s~l~~~l~ 98 (101)
+|.++++|.
T Consensus 168 ~S~vR~~l~ 176 (410)
T 3c96_A 168 HSAVRAHLH 176 (410)
T ss_dssp TCHHHHHHC
T ss_pred cchhHHHhc
Confidence 999988773
No 50
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.21 E-value=6e-06 Score=65.58 Aligned_cols=74 Identities=15% Similarity=0.214 Sum_probs=58.4
Q ss_pred CCcEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecC
Q psy9487 10 HGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGC 89 (101)
Q Consensus 10 ~~~~~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~ 89 (101)
..++.+.+..+.++|.+.+++. |+.+++|+++..+ ++.|+ |.+.+. .+|+ ..+++|++||.|||+
T Consensus 130 ~~~~~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~-~~~v~-v~~~~~---~~G~-------~~~i~a~~vVgADG~ 194 (549)
T 2r0c_A 130 EPDAICPQHWLAPLLAEAVGER---LRTRSRLDSFEQR-DDHVR-ATITDL---RTGA-------TRAVHARYLVACDGA 194 (549)
T ss_dssp SCCEECCHHHHHHHHHHHHGGG---EECSEEEEEEEEC-SSCEE-EEEEET---TTCC-------EEEEEEEEEEECCCT
T ss_pred CcccccCHHHHHHHHHHHHHHh---cccCcEEEEEEEe-CCEEE-EEEEEC---CCCC-------EEEEEeCEEEECCCC
Confidence 3468999999999999999988 9999999999986 45554 555431 1232 157999999999999
Q ss_pred CchhhHHHh
Q psy9487 90 HGHLTKSLS 98 (101)
Q Consensus 90 ~s~l~~~l~ 98 (101)
+|.+.++|-
T Consensus 195 ~S~vR~~lg 203 (549)
T 2r0c_A 195 SSPTRKALG 203 (549)
T ss_dssp TCHHHHHHT
T ss_pred CcHHHHHcC
Confidence 999988773
No 51
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.20 E-value=5.8e-06 Score=59.95 Aligned_cols=72 Identities=18% Similarity=0.243 Sum_probs=56.3
Q ss_pred CCCCCCCCcEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEE
Q psy9487 4 GMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVT 83 (101)
Q Consensus 4 ~~~~~~~~~~~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~V 83 (101)
++++........++..+.++|.+.+++.|++++.+++|+++..+ ++.+.+|.+.+ + ++.++.|
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~-~~~~~~v~~~~---------------g-~~~~d~v 124 (357)
T 4a9w_A 62 GWPMPASQGPYPARAEVLAYLAQYEQKYALPVLRPIRVQRVSHF-GERLRVVARDG---------------R-QWLARAV 124 (357)
T ss_dssp SSCCCCCSSSSCBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEE-TTEEEEEETTS---------------C-EEEEEEE
T ss_pred CCCCCCCccCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEC-CCcEEEEEeCC---------------C-EEEeCEE
Confidence 33444444455678999999999999999999999999999885 55544477654 3 7999999
Q ss_pred EEeecCCch
Q psy9487 84 IFAEGCHGH 92 (101)
Q Consensus 84 I~A~G~~s~ 92 (101)
|+|+|.++.
T Consensus 125 V~AtG~~~~ 133 (357)
T 4a9w_A 125 ISATGTWGE 133 (357)
T ss_dssp EECCCSGGG
T ss_pred EECCCCCCC
Confidence 999998653
No 52
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.19 E-value=5e-06 Score=67.80 Aligned_cols=65 Identities=20% Similarity=0.280 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 18 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 18 ~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
..+.+.|.+++++.|++|++++.|++++.+ +++|.||.+.+. .+|+. ..|+|+.||+|+|.++.+
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~-~g~v~Gv~~~~~---~~G~~-------~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLME-NGECRGVIALCI---EDGTI-------HRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEE-TTEEEEEEEEET---TTCCE-------EEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEE-CCEEEEEEEEEc---CCCcE-------EEEEcCeEEECCCccccc
Confidence 378889999999999999999999999986 789999988531 22322 479999999999999865
No 53
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.18 E-value=5.5e-06 Score=62.33 Aligned_cols=58 Identities=22% Similarity=0.252 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 18 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 18 ~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
..+.+.|.+.+++.|++|+++++|++|..+ ++++++|.+. |.++.|+.||+|.+++..
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~-~~~~~gv~~~----------------g~~~~ad~VV~a~~~~~~ 253 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIE-NGKAAGIIAD----------------DRIHDADLVISNLGHAAT 253 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEET----------------TEEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEE-CCEEEEEEEC----------------CEEEECCEEEECCCHHHH
Confidence 567888999999999999999999999996 7889999874 368999999999998754
No 54
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.18 E-value=6e-06 Score=67.22 Aligned_cols=63 Identities=14% Similarity=0.015 Sum_probs=52.7
Q ss_pred EEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCe-EEEccEEEEeecCCc
Q psy9487 13 YVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGM-ELHAKVTIFAEGCHG 91 (101)
Q Consensus 13 ~~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~-~i~A~~VI~A~G~~s 91 (101)
..++-..+.+.|.+.|++.|++|+++++|++|..+ +++ +.|++.+ |. ++.|+.||+|+|.++
T Consensus 407 g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~-~~~-v~V~t~~---------------G~~~i~Ad~VVlAtG~~s 469 (689)
T 3pvc_A 407 GWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRI-DSQ-WQLTFGQ---------------SQAAKHHATVILATGHRL 469 (689)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEC-SSS-EEEEEC----------------CCCCEEESEEEECCGGGT
T ss_pred eEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEe-CCe-EEEEeCC---------------CcEEEECCEEEECCCcch
Confidence 34577889999999999999999999999999986 555 4677754 34 699999999999997
Q ss_pred h
Q psy9487 92 H 92 (101)
Q Consensus 92 ~ 92 (101)
.
T Consensus 470 ~ 470 (689)
T 3pvc_A 470 P 470 (689)
T ss_dssp T
T ss_pred h
Confidence 6
No 55
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.17 E-value=3.9e-06 Score=67.26 Aligned_cols=68 Identities=19% Similarity=0.178 Sum_probs=55.1
Q ss_pred EEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 15 VRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 15 v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
++-..+...|++.|++.|++|+++++|+++..+ ++++++|++.+. .+++ +.+|+|+.||+|+|+|+.-
T Consensus 185 v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~-~~~v~gV~~~d~---~tg~-------~~~i~A~~VV~AaG~ws~~ 252 (571)
T 2rgh_A 185 NNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYE-GDQIVGVKARDL---LTDE-------VIEIKAKLVINTSGPWVDK 252 (571)
T ss_dssp CCHHHHHHHHHHHHHHTTCEEESSEEEEEEEEE-TTEEEEEEEEET---TTCC-------EEEEEBSCEEECCGGGHHH
T ss_pred EchHHHHHHHHHHHHHcCCeEEeccEEEEEEEe-CCEEEEEEEEEc---CCCC-------EEEEEcCEEEECCChhHHH
Confidence 456678888999999999999999999999986 678999987541 1121 2479999999999999843
No 56
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.16 E-value=2.1e-06 Score=64.82 Aligned_cols=68 Identities=12% Similarity=-0.005 Sum_probs=55.1
Q ss_pred CcEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCC
Q psy9487 11 GNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 90 (101)
Q Consensus 11 ~~~~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~ 90 (101)
+...++|..|.++|.+.+.+ ++|+.+++|+++..+ ++.+. |.+.+ |.+++|++||+|||.+
T Consensus 121 ~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~-~~~v~-v~~~~---------------g~~~~ad~vV~AdG~~ 181 (398)
T 2xdo_A 121 DNPEINRNDLRAILLNSLEN--DTVIWDRKLVMLEPG-KKKWT-LTFEN---------------KPSETADLVILANGGM 181 (398)
T ss_dssp SCCEECHHHHHHHHHHTSCT--TSEEESCCEEEEEEC-SSSEE-EEETT---------------SCCEEESEEEECSCTT
T ss_pred CCceECHHHHHHHHHhhcCC--CEEEECCEEEEEEEC-CCEEE-EEECC---------------CcEEecCEEEECCCcc
Confidence 45679999999999988764 789999999999885 44443 66654 4579999999999999
Q ss_pred chhhHHH
Q psy9487 91 GHLTKSL 97 (101)
Q Consensus 91 s~l~~~l 97 (101)
|.+++++
T Consensus 182 S~vR~~l 188 (398)
T 2xdo_A 182 SKVRKFV 188 (398)
T ss_dssp CSCCTTT
T ss_pred hhHHhhc
Confidence 9997765
No 57
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.16 E-value=6.6e-06 Score=64.51 Aligned_cols=67 Identities=15% Similarity=0.088 Sum_probs=55.2
Q ss_pred EEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 15 VRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 15 v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
++...+..+|++.|++.|++|+++++|+++..+ + ++++|.+.+. .+|+ ..+++|+.||+|+|+|+.-
T Consensus 146 v~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~-~-~~~~V~~~d~---~~G~-------~~~i~A~~VV~AtG~~s~~ 212 (501)
T 2qcu_A 146 VDDARLVLANAQMVVRKGGEVLTRTRATSARRE-N-GLWIVEAEDI---DTGK-------KYSWQARGLVNATGPWVKQ 212 (501)
T ss_dssp ECHHHHHHHHHHHHHHTTCEEECSEEEEEEEEE-T-TEEEEEEEET---TTCC-------EEEEEESCEEECCGGGHHH
T ss_pred EcHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEe-C-CEEEEEEEEC---CCCC-------EEEEECCEEEECCChhHHH
Confidence 688999999999999999999999999999985 3 7888888531 1121 1379999999999999863
No 58
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.14 E-value=6e-06 Score=65.68 Aligned_cols=58 Identities=16% Similarity=0.186 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCC
Q psy9487 18 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 90 (101)
Q Consensus 18 ~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~ 90 (101)
..+-+.|.+.+++.|++|+++++|++|+.+++++++||++.+ |.+++|+.||.|.+.+
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~---------------G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSD---------------GEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETT---------------SCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECC---------------CcEEECCEEEECCCcc
Confidence 678899999999999999999999999994478999999975 5689999999999987
No 59
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.13 E-value=8.8e-06 Score=66.75 Aligned_cols=64 Identities=23% Similarity=0.319 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
.+.+.|.+++++.|++|++++.|++++.+ +++|.||.+.+. .+|+. ..|+|+.||+|+|.++.+
T Consensus 159 ~l~~~L~~~a~~~gv~i~~~~~v~~L~~~-~g~v~Gv~~~~~---~~G~~-------~~i~A~~VVlATGG~~~~ 222 (660)
T 2bs2_A 159 TMLFAVANECLKLGVSIQDRKEAIALIHQ-DGKCYGAVVRDL---VTGDI-------IAYVAKGTLIATGGYGRI 222 (660)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEE-TTEEEEEEEEET---TTCCE-------EEEECSEEEECCCCCGGG
T ss_pred HHHHHHHHHHHhCCCEEEECcEEEEEEec-CCEEEEEEEEEC---CCCcE-------EEEEcCEEEEccCcchhh
Confidence 67888999999999999999999999985 789999987531 12321 469999999999999865
No 60
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.11 E-value=1e-05 Score=66.02 Aligned_cols=90 Identities=11% Similarity=0.195 Sum_probs=61.2
Q ss_pred CCCcEEEEhHHHHHHHHHHHHHCC---CEEecCCceeEEEEec------CCcEEEEEeccccc-----------cCCCCC
Q psy9487 9 NHGNYVVRLGHVVKWLGEQAEAMG---VEIYPGIPASEVLYHG------DGSVKGIATGDVGI-----------AKDGSP 68 (101)
Q Consensus 9 ~~~~~~v~r~~~d~~l~~~A~~~G---v~i~~gt~v~~i~~~~------~g~v~GV~~~~~g~-----------~~~g~~ 68 (101)
....+++++..+.++|.+.+++.| ++|..++.++++..++ ++.-+.|.+.+... ..++-.
T Consensus 110 ~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~ 189 (665)
T 1pn0_A 110 RYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYPVTMTLRYMSEDESTPLQFGHKTENGLF 189 (665)
T ss_dssp SSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCCCEEEEEEECCGGGSCCCTTCCCCCSSSC
T ss_pred CCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccCCCCCEEEEEEecccccccccccccccccccc
Confidence 345688999999999999999988 9999999999998863 12223344432000 000000
Q ss_pred CcC----------------CCCC--eEEEccEEEEeecCCchhhHHHh
Q psy9487 69 KDT----------------FARG--MELHAKVTIFAEGCHGHLTKSLS 98 (101)
Q Consensus 69 ~~~----------------~~~g--~~i~A~~VI~A~G~~s~l~~~l~ 98 (101)
..+ ...| .+++|++||.|||++|.++++|-
T Consensus 190 ~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~VR~~lg 237 (665)
T 1pn0_A 190 RSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVRRTLG 237 (665)
T ss_dssp CCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHHHHHHT
T ss_pred cccccccccccccccccccCCCCceEEEEeCEEEeccCCCCHHHHhcC
Confidence 000 0113 57999999999999999988874
No 61
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.10 E-value=1e-05 Score=62.68 Aligned_cols=58 Identities=17% Similarity=0.239 Sum_probs=49.5
Q ss_pred EhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 16 RLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 16 ~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
.+..+.+.|.+++++.|++|+++++|+++..+ ++. +.|.+.+ | +++|+.||+|+|.+|
T Consensus 130 ~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~-~~~-~~V~~~~---------------g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 130 SAKDIIRMLMAEMKEAGVQLRLETSIGEVERT-ASG-FRVTTSA---------------G-TVDAASLVVASGGKS 187 (417)
T ss_dssp CHHHHHHHHHHHHHHHTCEEECSCCEEEEEEE-TTE-EEEEETT---------------E-EEEESEEEECCCCSS
T ss_pred CHHHHHHHHHHHHHHCCCEEEECCEEEEEEEe-CCE-EEEEECC---------------c-EEEeeEEEECCCCcc
Confidence 45688899999999999999999999999886 443 5577654 3 799999999999998
No 62
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.05 E-value=9.2e-06 Score=65.71 Aligned_cols=65 Identities=18% Similarity=0.368 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHHCC-CEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 18 GHVVKWLGEQAEAMG-VEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 18 ~~~d~~l~~~A~~~G-v~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
..+.+.|.+++++.| ++|++++.|++++.+ +++|.||.+.+. .+|+. ..|+|+.||+|+|.++.+
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~-~g~v~Gv~~~~~---~~G~~-------~~i~A~~VVlAtGg~s~~ 199 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVD-DGHVRGLVAMNM---MEGTL-------VQIRANAVVMATGGAGRV 199 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEE-TTEEEEEEEEET---TTTEE-------EEEECSCEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEe-CCEEEEEEEEEc---CCCcE-------EEEEcCeEEECCCCCccc
Confidence 478889999999999 999999999999986 789999976531 12221 379999999999999977
No 63
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.03 E-value=2.3e-05 Score=52.72 Aligned_cols=64 Identities=20% Similarity=0.222 Sum_probs=51.7
Q ss_pred EEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchhh
Q psy9487 15 VRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLT 94 (101)
Q Consensus 15 v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l~ 94 (101)
+....+.+++.+.+++.|++++++ +|+++..+ ++. ..|++.+ | ++.++.||+|+|.++.+.
T Consensus 53 ~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~-~~~-~~v~~~~---------------g-~i~ad~vI~A~G~~~~~~ 113 (180)
T 2ywl_A 53 PSGEELLRRLEAHARRYGAEVRPG-VVKGVRDM-GGV-FEVETEE---------------G-VEKAERLLLCTHKDPTLP 113 (180)
T ss_dssp CCHHHHHHHHHHHHHHTTCEEEEC-CCCEEEEC-SSS-EEEECSS---------------C-EEEEEEEEECCTTCCHHH
T ss_pred CCHHHHHHHHHHHHHHcCCEEEeC-EEEEEEEc-CCE-EEEEECC---------------C-EEEECEEEECCCCCCCcc
Confidence 446788899999999999999999 99999875 343 3466544 4 799999999999999776
Q ss_pred HHH
Q psy9487 95 KSL 97 (101)
Q Consensus 95 ~~l 97 (101)
+.+
T Consensus 114 ~~~ 116 (180)
T 2ywl_A 114 SLL 116 (180)
T ss_dssp HHH
T ss_pred ccC
Confidence 654
No 64
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=97.98 E-value=6.6e-06 Score=65.61 Aligned_cols=65 Identities=17% Similarity=0.143 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHH-CCCEEecCCceeEEEEecCC------cEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 19 HVVKWLGEQAEA-MGVEIYPGIPASEVLYHGDG------SVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 19 ~~d~~l~~~A~~-~Gv~i~~gt~v~~i~~~~~g------~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
.+.+.|.+++++ .|++|++++.|++++.++++ +|.||.+.+. .+|+. ..|+|+.||+|+|.++
T Consensus 139 ~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~---~~G~~-------~~i~A~~VVlAtGg~~ 208 (540)
T 1chu_A 139 EVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNR---NKETV-------ETCHAKAVVLATGGAS 208 (540)
T ss_dssp ---CCCHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEET---TTTEE-------EEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEc---CCCcE-------EEEEcCeEEECCCCcc
Confidence 566778899998 79999999999999984346 8999988641 12221 4799999999999999
Q ss_pred hh
Q psy9487 92 HL 93 (101)
Q Consensus 92 ~l 93 (101)
.+
T Consensus 209 ~~ 210 (540)
T 1chu_A 209 KV 210 (540)
T ss_dssp GG
T ss_pred cc
Confidence 75
No 65
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.92 E-value=3.4e-05 Score=63.59 Aligned_cols=63 Identities=14% Similarity=0.206 Sum_probs=54.2
Q ss_pred EEEEhHHHHHHHHHHHHH-CCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 13 YVVRLGHVVKWLGEQAEA-MGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 13 ~~v~r~~~d~~l~~~A~~-~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
+.++|..+.+.|.+.+++ .|++|+ .+.|+++..+ +++|.||.+.+ |..+.|+.||+|+|.++
T Consensus 118 ~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e-~g~V~GV~t~d---------------G~~i~AdaVVLATG~~s 180 (637)
T 2zxi_A 118 AQADKKRYREYMKKVCENQENLYIK-QEEVVDIIVK-NNQVVGVRTNL---------------GVEYKTKAVVVTTGTFL 180 (637)
T ss_dssp EEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEES-SSBEEEEEETT---------------SCEEECSEEEECCTTCB
T ss_pred hhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEec-CCEEEEEEECC---------------CcEEEeCEEEEccCCCc
Confidence 467899999999999998 599996 5699999985 78999999865 56899999999999875
Q ss_pred h
Q psy9487 92 H 92 (101)
Q Consensus 92 ~ 92 (101)
.
T Consensus 181 ~ 181 (637)
T 2zxi_A 181 N 181 (637)
T ss_dssp T
T ss_pred c
Confidence 4
No 66
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=97.91 E-value=3.2e-05 Score=63.80 Aligned_cols=63 Identities=14% Similarity=0.162 Sum_probs=54.2
Q ss_pred EEEEhHHHHHHHHHHHHH-CCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 13 YVVRLGHVVKWLGEQAEA-MGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 13 ~~v~r~~~d~~l~~~A~~-~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
+.+++..+.+.|.+.+++ .|++|+ .+.|+++..+ +++|++|.+.+ |.+++|+.||+|+|.++
T Consensus 119 ~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~e-~g~V~GV~t~d---------------G~~I~Ad~VVLATGt~s 181 (651)
T 3ces_A 119 AQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIVE-NDRVVGAVTQM---------------GLKFRAKAVVLTVGTFL 181 (651)
T ss_dssp EEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEES-SSBEEEEEETT---------------SEEEEEEEEEECCSTTT
T ss_pred hhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEec-CCEEEEEEECC---------------CCEEECCEEEEcCCCCc
Confidence 467888999999999998 699996 4699999985 78999999865 56899999999999986
Q ss_pred h
Q psy9487 92 H 92 (101)
Q Consensus 92 ~ 92 (101)
.
T Consensus 182 ~ 182 (651)
T 3ces_A 182 D 182 (651)
T ss_dssp C
T ss_pred c
Confidence 4
No 67
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=97.91 E-value=4.7e-05 Score=58.49 Aligned_cols=59 Identities=17% Similarity=0.134 Sum_probs=49.1
Q ss_pred EhHHHHHHHHHHHHHCCCEEecCCceeEEEEec---CCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 16 RLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHG---DGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 16 ~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~---~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
....+.+.|.+.+++.||+|+++++|+++..++ ++. +.|++.+ .+++|+.||+|+|.++
T Consensus 107 ~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~-~~v~~~~----------------g~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 107 GAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVR-FVLQVNS----------------TQWQCKNLIVATGGLS 168 (401)
T ss_dssp CTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCC-EEEEETT----------------EEEEESEEEECCCCSS
T ss_pred CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCe-EEEEECC----------------CEEECCEEEECCCCcc
Confidence 578888899999999999999999999998741 244 4566643 3799999999999998
No 68
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=97.88 E-value=2e-05 Score=64.76 Aligned_cols=69 Identities=13% Similarity=0.100 Sum_probs=54.8
Q ss_pred EEhHHHHHHHHHHHHHC--CCEEecCCceeEEEEecC--CcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCC
Q psy9487 15 VRLGHVVKWLGEQAEAM--GVEIYPGIPASEVLYHGD--GSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 90 (101)
Q Consensus 15 v~r~~~d~~l~~~A~~~--Gv~i~~gt~v~~i~~~~~--g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~ 90 (101)
+....+.+.|.+++++. |++|++++.|.+++.+++ ++|.||.+.+. .+|+. ..|+|+.||+|+|..
T Consensus 163 ~~G~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~---~~g~~-------~~i~Ak~VVLATGG~ 232 (662)
T 3gyx_A 163 INGESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNL---RANEV-------HIFKANAMVVACGGA 232 (662)
T ss_dssp EEETSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEES---SSSCE-------EEEECSEEEECCCCB
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEc---CCCcE-------EEEEeCEEEECCCcc
Confidence 34457888899999998 999999999999999633 39999987541 23332 579999999999998
Q ss_pred chh
Q psy9487 91 GHL 93 (101)
Q Consensus 91 s~l 93 (101)
+.+
T Consensus 233 g~~ 235 (662)
T 3gyx_A 233 VNV 235 (662)
T ss_dssp CSS
T ss_pred ccc
Confidence 854
No 69
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=97.87 E-value=4.3e-05 Score=59.73 Aligned_cols=62 Identities=23% Similarity=0.269 Sum_probs=51.2
Q ss_pred hHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchhh
Q psy9487 17 LGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHLT 94 (101)
Q Consensus 17 r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l~ 94 (101)
...+.+.|.+++++.|++|++++.| +++.+ +++|.||.+.+. +.++.|+.||+|+|.++.+.
T Consensus 118 g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~-~~~v~Gv~v~~~--------------~g~~~a~~VVlAtGg~~~~~ 179 (472)
T 2e5v_A 118 GREIFNFLLKLAREEGIPIIEDRLV-EIRVK-DGKVTGFVTEKR--------------GLVEDVDKLVLATGGYSYLY 179 (472)
T ss_dssp HHHHHHHHHHHHHHTTCCEECCCEE-EEEEE-TTEEEEEEETTT--------------EEECCCSEEEECCCCCGGGS
T ss_pred HHHHHHHHHHHHHhCCCEEEECcEE-EEEEe-CCEEEEEEEEeC--------------CCeEEeeeEEECCCCCcccC
Confidence 3567888999998899999999999 99886 789999987531 13578999999999998763
No 70
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.86 E-value=5.5e-05 Score=62.34 Aligned_cols=63 Identities=14% Similarity=0.195 Sum_probs=53.9
Q ss_pred EEEEhHHHHHHHHHHHHHC-CCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 13 YVVRLGHVVKWLGEQAEAM-GVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 13 ~~v~r~~~d~~l~~~A~~~-Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
+.++|..+.+.|.+.+++. |++|+.+ .|+++..+ +++|.||.+.+ |..+.|+.||+|+|.++
T Consensus 112 ~~~Dr~~l~~~L~~~l~~~~GV~I~~~-~V~~L~~d-~g~V~GV~t~~---------------G~~i~Ad~VVLATG~~s 174 (641)
T 3cp8_A 112 AQADKTQYSLYMRRIVEHEPNIDLLQD-TVIGVSAN-SGKFSSVTVRS---------------GRAIQAKAAILACGTFL 174 (641)
T ss_dssp EEECHHHHHHHHHHHHHTCTTEEEEEC-CEEEEEEE-TTEEEEEEETT---------------SCEEEEEEEEECCTTCB
T ss_pred hhcCHHHHHHHHHHHHHhCCCCEEEee-EEEEEEec-CCEEEEEEECC---------------CcEEEeCEEEECcCCCC
Confidence 4788999999999999884 9999765 89999885 78999999865 46899999999999885
Q ss_pred h
Q psy9487 92 H 92 (101)
Q Consensus 92 ~ 92 (101)
.
T Consensus 175 ~ 175 (641)
T 3cp8_A 175 N 175 (641)
T ss_dssp T
T ss_pred C
Confidence 4
No 71
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=97.84 E-value=3.7e-05 Score=62.47 Aligned_cols=66 Identities=24% Similarity=0.233 Sum_probs=52.5
Q ss_pred hHHHHHHHHHHHHHC-CC-EEecCCceeEEEEecCC---cEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 17 LGHVVKWLGEQAEAM-GV-EIYPGIPASEVLYHGDG---SVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 17 r~~~d~~l~~~A~~~-Gv-~i~~gt~v~~i~~~~~g---~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
-..+.+.|.+.+++. |+ +|++++.|++++.+ ++ +|.||.+.+. .+|+ ...|+|+.||+|+|.++
T Consensus 150 g~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~-~~~~g~v~Gv~~~~~---~~g~-------~~~i~A~~VVlAtGG~~ 218 (643)
T 1jnr_A 150 GESYKPIIAEAAKMAVGEENIYERVFIFELLKD-NNDPNAVAGAVGFSV---REPK-------FYVFKAKAVILATGGAT 218 (643)
T ss_dssp ETTHHHHHHHHHHHHHCGGGEECSEEEEEEEEC-TTCTTBEEEEEEEES---SSSC-------EEEEECSEEEECCCCBC
T ss_pred cHHHHHHHHHHHHhcCCCcEEEecCEEEEEEEc-CCccceeEEEEEEEe---cCCc-------EEEEEcCEEEECCCccc
Confidence 345778889999988 99 99999999999986 55 9999987431 1222 14799999999999998
Q ss_pred hh
Q psy9487 92 HL 93 (101)
Q Consensus 92 ~l 93 (101)
.+
T Consensus 219 ~~ 220 (643)
T 1jnr_A 219 LL 220 (643)
T ss_dssp SS
T ss_pred cc
Confidence 64
No 72
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.81 E-value=5.4e-05 Score=58.58 Aligned_cols=59 Identities=20% Similarity=0.261 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEec-CCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 18 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHG-DGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 18 ~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~-~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
..+.+.|++.+++.|++|+++++|++|..+. ++++++|++. |.++.|+.||+|.|.|+.
T Consensus 242 ~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~~----------------g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 242 GELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKTK----------------LGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEET----------------TEEEECSCEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEEC----------------CeEEECCEEEECCCccch
Confidence 5788899999999999999999999999852 6788888873 368999999999999854
No 73
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.81 E-value=8.3e-05 Score=56.46 Aligned_cols=60 Identities=18% Similarity=0.273 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 18 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 18 ~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
..+.+++.+.+++.|++|++++.|+++..+ ++++.+|++.+ |.++.||.||+|.|.....
T Consensus 194 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v~~v~l~d---------------G~~i~aD~Vv~a~G~~p~~ 253 (415)
T 3lxd_A 194 EALSEFYQAEHRAHGVDLRTGAAMDCIEGD-GTKVTGVRMQD---------------GSVIPADIVIVGIGIVPCV 253 (415)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEES-SSBEEEEEESS---------------SCEEECSEEEECSCCEESC
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEec-CCcEEEEEeCC---------------CCEEEcCEEEECCCCccCh
Confidence 456777888899999999999999999874 68999999876 5789999999999987653
No 74
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.80 E-value=8.3e-05 Score=56.37 Aligned_cols=59 Identities=17% Similarity=0.373 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 18 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 18 ~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
..+.++|.+.+++.||+|++++.|+++..+ ++++.+|++.+ |.++.+|.||+|.|....
T Consensus 184 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v~~V~~~d---------------G~~i~aD~Vv~a~G~~p~ 242 (404)
T 3fg2_P 184 PEISSYFHDRHSGAGIRMHYGVRATEIAAE-GDRVTGVVLSD---------------GNTLPCDLVVVGVGVIPN 242 (404)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETT---------------SCEEECSEEEECCCEEEC
T ss_pred HHHHHHHHHHHHhCCcEEEECCEEEEEEec-CCcEEEEEeCC---------------CCEEEcCEEEECcCCccC
Confidence 356778888999999999999999999875 68899999876 568999999999998754
No 75
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=97.78 E-value=1.2e-05 Score=63.20 Aligned_cols=74 Identities=18% Similarity=-0.011 Sum_probs=56.0
Q ss_pred cEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEec-CCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCC
Q psy9487 12 NYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHG-DGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 90 (101)
Q Consensus 12 ~~~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~-~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~ 90 (101)
-+.+.+..+.+.|.+.+++.|++|+++++|+++..++ ++..++|.+.+. .+|+ ..+++|+.||+|+|++
T Consensus 160 ~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~---~~g~-------~~~i~ad~VV~A~G~~ 229 (497)
T 2bry_A 160 LDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPN---PPAQ-------LASYEFDVLISAAGGK 229 (497)
T ss_dssp CCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESC---CCHH-------HHTCCBSEEEECCCTT
T ss_pred cccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEEC---CCCC-------EEEEEcCEEEECCCCC
Confidence 3468889999999999999999999999999998742 244566766320 0111 0368999999999999
Q ss_pred chhhH
Q psy9487 91 GHLTK 95 (101)
Q Consensus 91 s~l~~ 95 (101)
|.+.+
T Consensus 230 S~~r~ 234 (497)
T 2bry_A 230 FVPEG 234 (497)
T ss_dssp CCCTT
T ss_pred ccccc
Confidence 98753
No 76
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.77 E-value=4.5e-05 Score=58.79 Aligned_cols=58 Identities=16% Similarity=0.254 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 18 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 18 ~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
..+.+.|.+.+++.|++|+++++|++|..+ ++++++|.+. |.+++|+.||+|.|.++.
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~-~~~v~~v~~~----------------g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIME-NGKVVGVKSE----------------GEVARCKQLICDPSYVPD 291 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEEE-TTEEEEEEET----------------TEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEe-CCEEEEEEEC----------------CeEEECCEEEECCCCCcc
Confidence 578889999999999999999999999986 7888888753 478999999999999864
No 77
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.61 E-value=1.3e-05 Score=60.27 Aligned_cols=57 Identities=18% Similarity=0.109 Sum_probs=48.1
Q ss_pred cEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 12 NYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 12 ~~~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
.+.+.|..|.++|.+++++.|++|+++++|+++.. . . ++.|++||+|||.+|
T Consensus 92 ~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~---------~-----------------~~~ad~vV~AdG~~S 143 (381)
T 3c4a_A 92 LCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGE--L---------P-----------------LADYDLVVLANGVNH 143 (381)
T ss_dssp EEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGG--C---------C-----------------GGGCSEEEECCGGGG
T ss_pred eeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchh--c---------c-----------------cccCCEEEECCCCCc
Confidence 57899999999999999999999999999988732 1 0 146899999999999
Q ss_pred hhhHHH
Q psy9487 92 HLTKSL 97 (101)
Q Consensus 92 ~l~~~l 97 (101)
. .+++
T Consensus 144 ~-R~~l 148 (381)
T 3c4a_A 144 K-TAHF 148 (381)
T ss_dssp G-TCCS
T ss_pred h-HHhh
Confidence 8 6554
No 78
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=97.59 E-value=8.4e-05 Score=56.15 Aligned_cols=56 Identities=18% Similarity=0.097 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 18 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 18 ~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
..+.+.|++.+++.|++|+++++|++|..+ ++++ |.+ + |.++.||.||+|.|++..
T Consensus 189 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~-~~~v--V~~-~---------------g~~~~ad~Vv~a~~~~~~ 244 (421)
T 3nrn_A 189 KAVIDELERIIMENKGKILTRKEVVEINIE-EKKV--YTR-D---------------NEEYSFDVAISNVGVRET 244 (421)
T ss_dssp HHHHHHHHHHHHTTTCEEESSCCEEEEETT-TTEE--EET-T---------------CCEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCeEEEEEEE-CCEE--EEe-C---------------CcEEEeCEEEECCCHHHH
Confidence 567888999999999999999999999874 6666 543 2 468999999999998754
No 79
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.50 E-value=0.00053 Score=54.68 Aligned_cols=64 Identities=17% Similarity=0.268 Sum_probs=54.1
Q ss_pred EEEEhHHHHHHHHHHHHHCCC--EEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCC
Q psy9487 13 YVVRLGHVVKWLGEQAEAMGV--EIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 90 (101)
Q Consensus 13 ~~v~r~~~d~~l~~~A~~~Gv--~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~ 90 (101)
....+..+.++|.+.+++.|+ +++.++.|+++.+++++..+.|.+.+ |.++.++.||+|+|.+
T Consensus 82 ~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~---------------G~~i~ad~lV~AtG~~ 146 (540)
T 3gwf_A 82 TYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDH---------------GEVYRAKYVVNAVGLL 146 (540)
T ss_dssp SEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETT---------------SCEEEEEEEEECCCSC
T ss_pred cCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcC---------------CCEEEeCEEEECCccc
Confidence 457889999999999999999 89999999999997554566688765 4679999999999975
Q ss_pred c
Q psy9487 91 G 91 (101)
Q Consensus 91 s 91 (101)
+
T Consensus 147 s 147 (540)
T 3gwf_A 147 S 147 (540)
T ss_dssp C
T ss_pred c
Confidence 4
No 80
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.48 E-value=0.00011 Score=57.76 Aligned_cols=63 Identities=21% Similarity=0.201 Sum_probs=45.9
Q ss_pred HHHHHHHHHCC-CEEecCCceeEEEEecCC-cEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 22 KWLGEQAEAMG-VEIYPGIPASEVLYHGDG-SVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 22 ~~l~~~A~~~G-v~i~~gt~v~~i~~~~~g-~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
..++..|++.| ++|++++.|++|++++++ +++||++.+ .+|.. ....+++|+.||+|+|+...
T Consensus 225 ~~~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~----~~g~~----~~~~~v~A~~VIlaaG~~~s 289 (504)
T 1n4w_A 225 KTYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKD----TDGKL----LATKEISCRYLFLGAGSLGS 289 (504)
T ss_dssp TTHHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEEC----TTCCE----EEEEEEEEEEEEECSHHHHH
T ss_pred HHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeC----CCCcc----ceeEEEeeCEEEEccCCCCC
Confidence 34456777776 999999999999996434 899999863 12210 00157999999999998744
No 81
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.41 E-value=0.0008 Score=49.52 Aligned_cols=62 Identities=18% Similarity=0.128 Sum_probs=50.0
Q ss_pred EEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 15 VRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 15 v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
+.+..+.++|.+.+++.|++++.++.|+.+..+ ++..+.|.+.+ +.++.++.||+|+|+.+.
T Consensus 71 ~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~-~~~~~~v~~~~---------------g~~~~~~~li~AtG~~~~ 132 (360)
T 3ab1_A 71 VPAIDLVESLWAQAERYNPDVVLNETVTKYTKL-DDGTFETRTNT---------------GNVYRSRAVLIAAGLGAF 132 (360)
T ss_dssp EEHHHHHHHHHHHHHTTCCEEECSCCEEEEEEC-TTSCEEEEETT---------------SCEEEEEEEEECCTTCSC
T ss_pred CCHHHHHHHHHHHHHHhCCEEEcCCEEEEEEEC-CCceEEEEECC---------------CcEEEeeEEEEccCCCcC
Confidence 567889999999999999999999999999885 33233466654 457999999999999653
No 82
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.40 E-value=0.00059 Score=53.68 Aligned_cols=60 Identities=15% Similarity=0.243 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEecCCcE--EEEEeccccccCCCCCCcCCCCCe-EEEccEEEEeecCCchh
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSV--KGIATGDVGIAKDGSPKDTFARGM-ELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v--~GV~~~~~g~~~~g~~~~~~~~g~-~i~A~~VI~A~G~~s~l 93 (101)
.+.+.|.+.+++.|++|+++++|+++..++++++ +.|++.+ |. ++.+|.||+|+|.++..
T Consensus 256 ~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~---------------G~~~i~aD~Vv~A~G~~p~~ 318 (523)
T 1mo9_A 256 ETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPN---------------GEMRIETDFVFLGLGEQPRS 318 (523)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETT---------------EEEEEECSCEEECCCCEECC
T ss_pred HHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECC---------------CcEEEEcCEEEECcCCccCC
Confidence 4567788899999999999999999987535565 3455543 34 79999999999988764
No 83
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.35 E-value=0.0012 Score=54.50 Aligned_cols=62 Identities=10% Similarity=0.127 Sum_probs=51.8
Q ss_pred cEEEE---hHHHHHHHHHHHHHCCCEEecCCceeEEEEecC-CcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEee
Q psy9487 12 NYVVR---LGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGD-GSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAE 87 (101)
Q Consensus 12 ~~~v~---r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~-g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~ 87 (101)
+|..- ...+.+.|.+.++..|++|+++++|.+|+++++ ++++||+..+ |.+|+|+.||.+.
T Consensus 369 g~~yp~GG~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~---------------Ge~i~A~~VVs~~ 433 (650)
T 1vg0_A 369 PFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQF---------------GQRIISKHFIIED 433 (650)
T ss_dssp SEEEETTCTTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETT---------------SCEEECSEEEEEG
T ss_pred ceEEeCCchhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCC---------------CCEEEcCEEEECh
Confidence 45555 789999999999999999999999999999633 8999998644 5789999999854
Q ss_pred c
Q psy9487 88 G 88 (101)
Q Consensus 88 G 88 (101)
.
T Consensus 434 ~ 434 (650)
T 1vg0_A 434 S 434 (650)
T ss_dssp G
T ss_pred h
Confidence 3
No 84
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.35 E-value=0.00063 Score=52.24 Aligned_cols=59 Identities=20% Similarity=0.250 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEe-cCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYH-GDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~-~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
.+.+++.+.+++.|+++++++.++++..+ +++++.+|.+.+ |.++.+|.||+|.|....
T Consensus 192 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~---------------G~~i~~D~Vv~a~G~~p~ 251 (431)
T 1q1r_A 192 PVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCED---------------GTRLPADLVIAGIGLIPN 251 (431)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETT---------------SCEEECSEEEECCCEEEC
T ss_pred HHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCC---------------CCEEEcCEEEECCCCCcC
Confidence 45677888899999999999999999761 257888888865 568999999999997654
No 85
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.33 E-value=0.00027 Score=55.71 Aligned_cols=66 Identities=21% Similarity=0.144 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHCC-CEEecCCceeEEEEecCC-cEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 19 HVVKWLGEQAEAMG-VEIYPGIPASEVLYHGDG-SVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 19 ~~d~~l~~~A~~~G-v~i~~gt~v~~i~~~~~g-~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
.....++..|++.| ++|++++.|++|++++++ +++||+..+ .+|.. ....+++|+.||+|+|+...
T Consensus 227 s~~~~~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~----~~g~~----~~~~~~~A~~VIlaaGa~~s 294 (507)
T 1coy_A 227 SLDKTYLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQID----EQGNV----VATKVVTADRVFFAAGSVGT 294 (507)
T ss_dssp CTTTTHHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEEC----TTSCE----EEEEEEEEEEEEECSHHHHH
T ss_pred ChHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeC----CCCcc----cccEEEEeCEEEEccCccCC
Confidence 33344566777776 999999999999996435 799999864 12210 00157999999999998744
No 86
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.27 E-value=0.00099 Score=48.78 Aligned_cols=59 Identities=19% Similarity=0.187 Sum_probs=46.9
Q ss_pred EEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 15 VRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 15 v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
+.+..+.++|.+.+++.|++++.+++|+++..+ ++.+ .|.+.+ .++.++.||+|+|.++
T Consensus 85 ~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~-~~~~-~v~~~~----------------g~~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 85 ISGETYAEYLQVVANHYELNIFENTVVTNISAD-DAYY-TIATTT----------------ETYHADYIFVATGDYN 143 (369)
T ss_dssp CBHHHHHHHHHHHHHHTTCEEECSCCEEEEEEC-SSSE-EEEESS----------------CCEEEEEEEECCCSTT
T ss_pred CCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEC-CCeE-EEEeCC----------------CEEEeCEEEECCCCCC
Confidence 466778888889999999999999999999875 3333 355543 2589999999999975
No 87
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.25 E-value=0.00082 Score=48.65 Aligned_cols=61 Identities=18% Similarity=0.222 Sum_probs=48.4
Q ss_pred EEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 14 VVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 14 ~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
.+.+..+.++|.+.+++.|++++.++ |.++..+ ++.+ .|.+ + +.+++++.||+|+|+++..
T Consensus 66 ~~~~~~~~~~l~~~~~~~gv~~~~~~-v~~i~~~-~~~~-~v~~-~---------------~~~~~~~~vv~A~G~~~~~ 126 (333)
T 1vdc_A 66 GILGVELTDKFRKQSERFGTTIFTET-VTKVDFS-SKPF-KLFT-D---------------SKAILADAVILAIGAVAKR 126 (333)
T ss_dssp CEEHHHHHHHHHHHHHHTTCEEECCC-CCEEECS-SSSE-EEEC-S---------------SEEEEEEEEEECCCEEECC
T ss_pred CCCHHHHHHHHHHHHHHCCCEEEEeE-EEEEEEc-CCEE-EEEE-C---------------CcEEEcCEEEECCCCCcCC
Confidence 36788999999999999999999997 8888764 3433 3555 3 4689999999999998653
No 88
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.24 E-value=0.001 Score=51.24 Aligned_cols=58 Identities=21% Similarity=0.221 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 18 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 18 ~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
..+.+.|.+.+++.|++|+++++|+++..+ ++++. |.+.+ |.++.+|.||+|.|.+..
T Consensus 202 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v~-v~~~~---------------g~~i~aD~Vv~a~G~~p~ 259 (472)
T 3iwa_A 202 KSLSQMLRHDLEKNDVVVHTGEKVVRLEGE-NGKVA-RVITD---------------KRTLDADLVILAAGVSPN 259 (472)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEE-EEEES---------------SCEEECSEEEECSCEEEC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEcc-CCeEE-EEEeC---------------CCEEEcCEEEECCCCCcC
Confidence 356677888899999999999999999874 56665 66654 468999999999998754
No 89
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.22 E-value=0.00045 Score=52.62 Aligned_cols=57 Identities=16% Similarity=0.109 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 18 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 18 ~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
..+.+.|++.+++.|++|+++++|++|..+ ++.++.|.+. +.++.|+.||+|.+++.
T Consensus 234 ~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~-~~~~~~v~~~----------------~~~~~ad~vv~a~p~~~ 290 (477)
T 3nks_A 234 EMLPQALETHLTSRGVSVLRGQPVCGLSLQ-AEGRWKVSLR----------------DSSLEADHVISAIPASV 290 (477)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEEC-GGGCEEEECS----------------SCEEEESEEEECSCHHH
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEc-CCceEEEEEC----------------CeEEEcCEEEECCCHHH
Confidence 367888999999999999999999999985 4454557653 25799999999987654
No 90
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.21 E-value=0.0012 Score=52.70 Aligned_cols=62 Identities=16% Similarity=0.233 Sum_probs=52.0
Q ss_pred EEEhHHHHHHHHHHHHHCCC--EEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCC
Q psy9487 14 VVRLGHVVKWLGEQAEAMGV--EIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 90 (101)
Q Consensus 14 ~v~r~~~d~~l~~~A~~~Gv--~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~ 90 (101)
...+..+.++|.+.+++.|+ .++.++.|+++.++++...+.|.+.+ |.++.++.||+|+|..
T Consensus 95 ~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~---------------G~~i~ad~lV~AtG~~ 158 (549)
T 4ap3_A 95 YATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDR---------------GDEVSARFLVVAAGPL 158 (549)
T ss_dssp SCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETT---------------CCEEEEEEEEECCCSE
T ss_pred CCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECC---------------CCEEEeCEEEECcCCC
Confidence 45778899999999999998 89999999999997555566788765 4679999999999954
No 91
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.21 E-value=0.00044 Score=54.58 Aligned_cols=61 Identities=20% Similarity=0.194 Sum_probs=45.5
Q ss_pred HHHHHHHHHH-CCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEE---EccEEEEeecCCch
Q psy9487 21 VKWLGEQAEA-MGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMEL---HAKVTIFAEGCHGH 92 (101)
Q Consensus 21 d~~l~~~A~~-~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i---~A~~VI~A~G~~s~ 92 (101)
...+++.|++ .|++|++++.|++|+++ +++++||++.+. .+|+. .++ .++.||+|+|++..
T Consensus 198 ~~~~l~~~~~~~~~~i~~~~~V~~i~~~-~~~~~gV~~~~~---~~g~~-------~~~~v~~~~~VIlaaG~~~s 262 (546)
T 1kdg_A 198 VATYLQTALARPNFTFKTNVMVSNVVRN-GSQILGVQTNDP---TLGPN-------GFIPVTPKGRVILSAGAFGT 262 (546)
T ss_dssp HHTHHHHHHTCTTEEEECSCCEEEEEEE-TTEEEEEEESCT---TSSGG-------GEEEEEEEEEEEECSHHHHH
T ss_pred HHHHHHHHhhCCCcEEEeCCEEEEEEEe-CCEEEEEEEEec---CCCce-------eEEEEEeCCEEEEcCChhcC
Confidence 3445677765 69999999999999996 689999998651 12321 123 78999999998753
No 92
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.20 E-value=0.00055 Score=52.10 Aligned_cols=57 Identities=18% Similarity=0.338 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
.+.+++.+..++.||+|++++.|+++.- ++++.+|++.+ |.++.+|.||+|.|....
T Consensus 186 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~~~~v~~~d---------------g~~i~aD~Vv~a~G~~p~ 242 (410)
T 3ef6_A 186 RIGAWLRGLLTELGVQVELGTGVVGFSG--EGQLEQVMASD---------------GRSFVADSALICVGAEPA 242 (410)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEEEC--SSSCCEEEETT---------------SCEEECSEEEECSCEEEC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEec--cCcEEEEEECC---------------CCEEEcCEEEEeeCCeec
Confidence 4567788888999999999999999875 35777888865 578999999999998765
No 93
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.20 E-value=0.0013 Score=51.95 Aligned_cols=63 Identities=13% Similarity=0.180 Sum_probs=50.3
Q ss_pred EEEhHHHHHHHHHHHHHCC--CEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 14 VVRLGHVVKWLGEQAEAMG--VEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 14 ~v~r~~~d~~l~~~A~~~G--v~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
...+..+.++|...+++.+ ++++.+++|+++.+++++..+.|.+.+ |.++.|+.||+|+|.++
T Consensus 90 ~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~---------------G~~~~ad~vV~AtG~~s 154 (542)
T 1w4x_A 90 YASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNH---------------GDRIRARYLIMASGQLS 154 (542)
T ss_dssp SCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETT---------------CCEEEEEEEEECCCSCC
T ss_pred cCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECC---------------CCEEEeCEEEECcCCCC
Confidence 3567888888888888876 789999999999997544455677754 45799999999999865
No 94
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.20 E-value=0.001 Score=47.70 Aligned_cols=63 Identities=21% Similarity=0.251 Sum_probs=49.2
Q ss_pred EEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecC-CcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 15 VRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGD-GSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 15 v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~-g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
..+..+.++|.+.+++.|++++.+++|+.+..+.+ +....|.+.+ |.++.++.+|+|+|+++.
T Consensus 53 ~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~---------------g~~~~~~~lv~AtG~~~~ 116 (310)
T 1fl2_A 53 TEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETAS---------------GAVLKARSIIVATGAKWR 116 (310)
T ss_dssp EEHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETT---------------SCEEEEEEEEECCCEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECC---------------CCEEEeCEEEECcCCCcC
Confidence 46778899999999999999999999999976321 2234466644 457999999999998654
No 95
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.18 E-value=0.0024 Score=45.83 Aligned_cols=63 Identities=17% Similarity=0.139 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCC-CCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKD-GSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~-g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
.+.+.|.+.+++.|++++++++++++..+ ++++.+|.+.+. .+ |+ ..++.+|.||+|.|....
T Consensus 185 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~---~~~g~-------~~~i~~D~vv~a~G~~p~ 248 (320)
T 1trb_A 185 ILIKRLMDKVENGNIILHTNRTLEEVTGD-QMGVTGVRLRDT---QNSDN-------IESLDVAGLFVAIGHSPN 248 (320)
T ss_dssp HHHHHHHHHHHTSSEEEECSCEEEEEEEC-SSSEEEEEEECC---TTCCC-------CEEEECSEEEECSCEEES
T ss_pred HHHHHHHHhcccCCeEEEcCceeEEEEcC-CCceEEEEEEec---cCCCc-------eEEEEcCEEEEEeCCCCC
Confidence 45556777888899999999999999874 568888887641 11 22 268999999999997654
No 96
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.18 E-value=0.0024 Score=46.21 Aligned_cols=60 Identities=25% Similarity=0.202 Sum_probs=48.2
Q ss_pred EEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 15 VRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 15 v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
+.+..+.++|.+.+++.|++++.++.|..+..+ ++ .+.|.+.+ +.++.++.||+|+|..+
T Consensus 62 ~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~-~~-~~~v~~~~---------------g~~~~~~~lv~AtG~~~ 121 (335)
T 2zbw_A 62 VYAKDLVKGLVEQVAPFNPVYSLGERAETLERE-GD-LFKVTTSQ---------------GNAYTAKAVIIAAGVGA 121 (335)
T ss_dssp EEHHHHHHHHHHHHGGGCCEEEESCCEEEEEEE-TT-EEEEEETT---------------SCEEEEEEEEECCTTSE
T ss_pred CCHHHHHHHHHHHHHHcCCEEEeCCEEEEEEEC-CC-EEEEEECC---------------CCEEEeCEEEECCCCCC
Confidence 467888889999999999999999999999875 33 33355543 35799999999999964
No 97
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.18 E-value=0.0013 Score=47.06 Aligned_cols=62 Identities=24% Similarity=0.149 Sum_probs=49.0
Q ss_pred EEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 14 VVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 14 ~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
.+++..+.++|.+.+++.|++++. +.|.++..+ ++. +.|.+.+ +.++.++.||+|+|+++..
T Consensus 55 ~~~~~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~-~~~-~~v~~~~---------------g~~~~~~~vv~AtG~~~~~ 116 (311)
T 2q0l_A 55 VVSGLDFMQPWQEQCFRFGLKHEM-TAVQRVSKK-DSH-FVILAED---------------GKTFEAKSVIIATGGSPKR 116 (311)
T ss_dssp CBCHHHHHHHHHHHHHTTSCEEEC-SCEEEEEEE-TTE-EEEEETT---------------SCEEEEEEEEECCCEEECC
T ss_pred cCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEEc-CCE-EEEEEcC---------------CCEEECCEEEECCCCCCCC
Confidence 467888999999999999999998 789999875 443 2355543 4579999999999987654
No 98
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.09 E-value=0.002 Score=48.33 Aligned_cols=58 Identities=16% Similarity=0.101 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
.+.+.|.+.+++.|++|++++.|+++..+ ++ .+.|.+.+ |.++.+|.||+|+|.++..
T Consensus 188 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~-~~~v~~~~---------------g~~i~~d~vv~a~G~~p~~ 245 (384)
T 2v3a_A 188 AAAKAVQAGLEGLGVRFHLGPVLASLKKA-GE-GLEAHLSD---------------GEVIPCDLVVSAVGLRPRT 245 (384)
T ss_dssp HHHHHHHHHHHTTTCEEEESCCEEEEEEE-TT-EEEEEETT---------------SCEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHHcCCEEEeCCEEEEEEec-CC-EEEEEECC---------------CCEEECCEEEECcCCCcCH
Confidence 45677888899999999999999999874 33 34566654 4689999999999988754
No 99
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.08 E-value=0.0015 Score=50.65 Aligned_cols=58 Identities=17% Similarity=0.228 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
.+.+.|.+.+++.|++|+++++|+++..+ ++++ .|.+.+ |.++.+|.||+|+|.....
T Consensus 233 ~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~-~~~v-~v~~~~---------------g~~i~aD~Vi~A~G~~p~~ 290 (484)
T 3o0h_A 233 DLRQLLNDAMVAKGISIIYEATVSQVQST-ENCY-NVVLTN---------------GQTICADRVMLATGRVPNT 290 (484)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEC-SSSE-EEEETT---------------SCEEEESEEEECCCEEECC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEee-CCEE-EEEECC---------------CcEEEcCEEEEeeCCCcCC
Confidence 45667788889999999999999999875 4554 577754 4689999999999986543
No 100
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.06 E-value=0.0023 Score=49.10 Aligned_cols=58 Identities=21% Similarity=0.285 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
.+.+.|.+..++.|++|+++++|+++..+ ++++..|.+ + |.++.+|.||+|.|.....
T Consensus 192 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~~v~~v~~-~---------------g~~i~~D~vv~a~G~~p~~ 249 (452)
T 2cdu_A 192 EFTDILAKDYEAHGVNLVLGSKVAAFEEV-DDEIITKTL-D---------------GKEIKSDIAILCIGFRPNT 249 (452)
T ss_dssp HHHHHHHHHHHHTTCEEEESSCEEEEEEE-TTEEEEEET-T---------------SCEEEESEEEECCCEEECC
T ss_pred hHHHHHHHHHHHCCCEEEcCCeeEEEEcC-CCeEEEEEe-C---------------CCEEECCEEEECcCCCCCH
Confidence 45667788889999999999999999864 577776665 3 4679999999999987653
No 101
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.06 E-value=0.0015 Score=50.62 Aligned_cols=60 Identities=13% Similarity=0.072 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCC-eEEEccEEEEeecCCchh
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARG-MELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g-~~i~A~~VI~A~G~~s~l 93 (101)
.+.+.|.+..++.|++|++++.|+++.-+++++++.|.+.+ | .++.+|.||+|.|.....
T Consensus 227 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~---------------G~~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 227 CIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMND---------------SKSIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETT---------------SCEEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECC---------------CcEEEEcCEEEECCCCCCcc
Confidence 45667788888999999999999999864344356677754 4 579999999999976553
No 102
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.04 E-value=0.0021 Score=50.28 Aligned_cols=58 Identities=21% Similarity=0.298 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 18 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 18 ~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
..+.+++.+..++.||++++++.|+++..+ ++.+ .|.+.+ |.++.+|.||+|.|....
T Consensus 226 ~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~-~~~~-~v~l~d---------------G~~i~aD~Vv~a~G~~pn 283 (493)
T 1m6i_A 226 EYLSNWTMEKVRREGVKVMPNAIVQSVGVS-SGKL-LIKLKD---------------GRKVETDHIVAAVGLEPN 283 (493)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCCEEEEEEE-TTEE-EEEETT---------------SCEEEESEEEECCCEEEC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEec-CCeE-EEEECC---------------CCEEECCEEEECCCCCcc
Confidence 357788889999999999999999999764 4444 677754 568999999999998764
No 103
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.03 E-value=0.0023 Score=49.11 Aligned_cols=56 Identities=16% Similarity=0.116 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
.+.+.+.+.+++.|++|+++++|+++..+ ++++ .|.+.+ + ++.+|.||+|.|....
T Consensus 190 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v-~v~~~~---------------g-~i~aD~Vv~A~G~~p~ 245 (452)
T 3oc4_A 190 EMVAEVQKSLEKQAVIFHFEETVLGIEET-ANGI-VLETSE---------------Q-EISCDSGIFALNLHPQ 245 (452)
T ss_dssp HHHHHHHHHHHTTTEEEEETCCEEEEEEC-SSCE-EEEESS---------------C-EEEESEEEECSCCBCC
T ss_pred HHHHHHHHHHHHcCCEEEeCCEEEEEEcc-CCeE-EEEECC---------------C-EEEeCEEEECcCCCCC
Confidence 45567788889999999999999999864 5676 677743 3 7999999999998654
No 104
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.03 E-value=0.0032 Score=45.08 Aligned_cols=59 Identities=19% Similarity=0.172 Sum_probs=48.4
Q ss_pred EEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCC
Q psy9487 15 VRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 90 (101)
Q Consensus 15 v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~ 90 (101)
+....+.++|.+.+++.|++++.++.|.++..+ ++....|.+.+ .++.++.||+|+|..
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~-~~~~~~v~~~~----------------g~~~~d~vVlAtG~~ 122 (332)
T 3lzw_A 64 IRAQELINNLKEQMAKFDQTICLEQAVESVEKQ-ADGVFKLVTNE----------------ETHYSKTVIITAGNG 122 (332)
T ss_dssp EEHHHHHHHHHHHHTTSCCEEECSCCEEEEEEC-TTSCEEEEESS----------------EEEEEEEEEECCTTS
T ss_pred CCHHHHHHHHHHHHHHhCCcEEccCEEEEEEEC-CCCcEEEEECC----------------CEEEeCEEEECCCCC
Confidence 467889999999999999999999999999885 33234467654 349999999999984
No 105
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.02 E-value=0.0018 Score=49.86 Aligned_cols=58 Identities=16% Similarity=0.082 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEE-eccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIA-TGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~-~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
.+.+.|.+.+++.|++|++++.|+++..+ ++.++.|. +.+ |. +.+|.||+|.|.+...
T Consensus 212 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~~~~~v~~~~~---------------g~-i~aD~Vv~a~G~~p~~ 270 (463)
T 4dna_A 212 DMRRGLHAAMEEKGIRILCEDIIQSVSAD-ADGRRVATTMKH---------------GE-IVADQVMLALGRMPNT 270 (463)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEC-TTSCEEEEESSS---------------CE-EEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHHCCCEEECCCEEEEEEEc-CCCEEEEEEcCC---------------Ce-EEeCEEEEeeCcccCC
Confidence 45677888899999999999999999875 34445677 654 45 9999999999986543
No 106
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.01 E-value=0.0017 Score=50.65 Aligned_cols=59 Identities=20% Similarity=0.206 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
.+.+.|.+.+++.|++|++++.|+++..+ ++..+.|.+.+ |.++.+|.||+|.|.+...
T Consensus 232 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~~~~v~~~~---------------G~~i~~D~vv~a~G~~p~~ 290 (490)
T 1fec_A 232 ELRKQLTEQLRANGINVRTHENPAKVTKN-ADGTRHVVFES---------------GAEADYDVVMLAIGRVPRS 290 (490)
T ss_dssp HHHHHHHHHHHHTTEEEEETCCEEEEEEC-TTSCEEEEETT---------------SCEEEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEc-CCCEEEEEECC---------------CcEEEcCEEEEccCCCcCc
Confidence 45667888899999999999999999875 33335577654 4579999999999987653
No 107
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.01 E-value=0.002 Score=49.29 Aligned_cols=69 Identities=14% Similarity=0.016 Sum_probs=50.5
Q ss_pred cEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 12 NYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 12 ~~~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
...+.+..+.++|.+.+++.+..++.+++|+++..+ ++. +.|.+.+. .+|+. ..++.++.||+|+|.++
T Consensus 109 ~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~-~~~-~~V~~~~~---~~G~~------~~~~~~d~VVvAtG~~s 177 (447)
T 2gv8_A 109 LQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKK-DGS-WVVTYKGT---KAGSP------ISKDIFDAVSICNGHYE 177 (447)
T ss_dssp CSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEE-TTE-EEEEEEES---STTCC------EEEEEESEEEECCCSSS
T ss_pred CCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeC-CCe-EEEEEeec---CCCCe------eEEEEeCEEEECCCCCC
Confidence 345678899999999999999999999999999875 443 33555431 11210 02799999999999965
No 108
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.00 E-value=0.0025 Score=49.63 Aligned_cols=58 Identities=17% Similarity=0.216 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
.+.+.|.+.+++.|++|+++++|+++..+ ++.+ .|.+.+ |.++.+|.||+|.|.+...
T Consensus 224 ~~~~~l~~~l~~~GV~i~~~~~V~~i~~~-~~~v-~v~~~~---------------g~~i~aD~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 224 DAALVLEESFAERGVRLFKNARAASVTRT-GAGV-LVTMTD---------------GRTVEGSHALMTIGSVPNT 281 (499)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEEC-SSSE-EEEETT---------------SCEEEESEEEECCCEEECC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEe-CCEE-EEEECC---------------CcEEEcCEEEECCCCCcCC
Confidence 45677888899999999999999999874 4444 455543 4689999999999988653
No 109
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=96.99 E-value=0.003 Score=44.94 Aligned_cols=60 Identities=13% Similarity=0.145 Sum_probs=47.9
Q ss_pred EEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 15 VRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 15 v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
+....+.++|.+.+++.|++++. +.|.++..+ ++. ..|.+.+ +.++.++.+|+|+|++..
T Consensus 67 ~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~-~~~-~~v~~~~---------------g~~~~~d~lvlAtG~~~~ 126 (323)
T 3f8d_A 67 IQASDMIKVFNKHIEKYEVPVLL-DIVEKIENR-GDE-FVVKTKR---------------KGEFKADSVILGIGVKRR 126 (323)
T ss_dssp EEHHHHHHHHHHHHHTTTCCEEE-SCEEEEEEC---C-EEEEESS---------------SCEEEEEEEEECCCCEEC
T ss_pred CCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEec-CCE-EEEEECC---------------CCEEEcCEEEECcCCCCc
Confidence 67788999999999999999999 899999875 444 3366643 468999999999998743
No 110
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=96.99 E-value=0.0023 Score=49.15 Aligned_cols=58 Identities=19% Similarity=0.228 Sum_probs=46.1
Q ss_pred hHHHHHHHHHHHHHCC-CEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 17 LGHVVKWLGEQAEAMG-VEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 17 r~~~d~~l~~~A~~~G-v~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
-..+.+.|.+.+++.| ++|+++++|++|..+ ++.+ .|.+.+ |..+.|+.||+|.|...
T Consensus 254 ~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~-~~~v-~v~~~~---------------g~~~~ad~vI~a~~~~~ 312 (495)
T 2vvm_A 254 QSAFARRFWEEAAGTGRLGYVFGCPVRSVVNE-RDAA-RVTARD---------------GREFVAKRVVCTIPLNV 312 (495)
T ss_dssp HHHHHHHHHHHHHTTTCEEEESSCCEEEEEEC-SSSE-EEEETT---------------CCEEEEEEEEECCCGGG
T ss_pred HHHHHHHHHHHhhhcCceEEEeCCEEEEEEEc-CCEE-EEEECC---------------CCEEEcCEEEECCCHHH
Confidence 3467778888999999 999999999999885 4554 366654 45799999999999653
No 111
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.98 E-value=0.00043 Score=55.10 Aligned_cols=60 Identities=15% Similarity=0.232 Sum_probs=45.0
Q ss_pred HHHHHHHHH-HCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEcc-EEEEeecCC
Q psy9487 21 VKWLGEQAE-AMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAK-VTIFAEGCH 90 (101)
Q Consensus 21 d~~l~~~A~-~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~-~VI~A~G~~ 90 (101)
...++..|. +.|++|++++.|++|+++++++++||++.+. .+|+. ..++|+ .||+|+|+.
T Consensus 211 ~~a~l~~a~~~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~---~~g~~-------~~i~A~k~VIlaaG~~ 272 (546)
T 2jbv_A 211 SVSYIHPIVEQENFTLLTGLRARQLVFDADRRCTGVDIVDS---AFGHT-------HRLTARNEVVLSTGAI 272 (546)
T ss_dssp HHHHTGGGTTCTTEEEECSCEEEEEEECTTSBEEEEEEESS---TTSCE-------EEEEEEEEEEECSHHH
T ss_pred HHHHHHHHhcCCCcEEEeCCEEEEEEECCCCeEEEEEEEEC---CCCcE-------EEEEeCccEEEecCcc
Confidence 344455554 5799999999999999963289999998651 11322 579998 999999985
No 112
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=96.97 E-value=0.0022 Score=51.15 Aligned_cols=64 Identities=13% Similarity=0.157 Sum_probs=53.0
Q ss_pred EEEEhHHHHHHHHHHHHHCCC--EEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCC
Q psy9487 13 YVVRLGHVVKWLGEQAEAMGV--EIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 90 (101)
Q Consensus 13 ~~v~r~~~d~~l~~~A~~~Gv--~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~ 90 (101)
....+..+.++|.+.+++.|+ .+..++.|+++.++++...+.|.+.+ |.++.++.||+|+|.+
T Consensus 82 ~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~---------------G~~~~ad~lV~AtG~~ 146 (545)
T 3uox_A 82 NFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDN---------------EEVVTCRFLISATGPL 146 (545)
T ss_dssp SSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETT---------------TEEEEEEEEEECCCSC
T ss_pred cCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECC---------------CCEEEeCEEEECcCCC
Confidence 345788899999999999998 89999999999987555566688765 5789999999999965
Q ss_pred c
Q psy9487 91 G 91 (101)
Q Consensus 91 s 91 (101)
+
T Consensus 147 s 147 (545)
T 3uox_A 147 S 147 (545)
T ss_dssp B
T ss_pred C
Confidence 4
No 113
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=96.96 E-value=0.0025 Score=49.46 Aligned_cols=68 Identities=12% Similarity=0.109 Sum_probs=50.2
Q ss_pred EEEhHHHHHHHHHHHHHCCCE--EecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 14 VVRLGHVVKWLGEQAEAMGVE--IYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 14 ~v~r~~~d~~l~~~A~~~Gv~--i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
.+++..+.++|.+.+++.|++ ++.++.|+++..++++..+.|.+.+. .+|+ ..++.++.||+|+|.++
T Consensus 97 ~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~---~~g~-------~~~~~~d~VVvAtG~~s 166 (464)
T 2xve_A 97 YPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDH---TTDT-------IYSEEFDYVVCCTGHFS 166 (464)
T ss_dssp SCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEET---TTTE-------EEEEEESEEEECCCSSS
T ss_pred CCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEc---CCCc-------eEEEEcCEEEECCCCCC
Confidence 457889999999999999998 99999999998863322345665431 1121 15799999999999643
No 114
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=96.95 E-value=0.0021 Score=49.50 Aligned_cols=59 Identities=17% Similarity=0.118 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
.+.++|.+.+++.|+++++++.|+++..+ ++....|.+.+ |.++.+|.||+|+|..+..
T Consensus 209 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~~~~~v~~~~---------------g~~i~~D~vv~a~G~~p~~ 267 (450)
T 1ges_A 209 MISETLVEVMNAEGPQLHTNAIPKAVVKN-TDGSLTLELED---------------GRSETVDCLIWAIGREPAN 267 (450)
T ss_dssp HHHHHHHHHHHHHSCEEECSCCEEEEEEC-TTSCEEEEETT---------------SCEEEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEe-CCcEEEEEECC---------------CcEEEcCEEEECCCCCcCC
Confidence 46677888889999999999999999874 33334566654 4579999999999987654
No 115
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=96.94 E-value=0.0024 Score=49.95 Aligned_cols=59 Identities=20% Similarity=0.228 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
.+.+.|.+.+++.|++|++++.|.++..+ ++..+.|.+.+ |.++.+|.||+|.|.....
T Consensus 236 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~~~~v~~~~---------------G~~i~~D~vv~a~G~~p~~ 294 (495)
T 2wpf_A 236 TIREEVTKQLTANGIEIMTNENPAKVSLN-TDGSKHVTFES---------------GKTLDVDVVMMAIGRIPRT 294 (495)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEC-TTSCEEEEETT---------------SCEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEc-CCceEEEEECC---------------CcEEEcCEEEECCCCcccc
Confidence 45667788889999999999999999874 33445677654 4589999999999987654
No 116
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=96.91 E-value=0.00057 Score=54.30 Aligned_cols=57 Identities=14% Similarity=0.295 Sum_probs=43.1
Q ss_pred HHHHHHHCCCEEecCCceeEEEEecC--CcEEEEEeccccccCCCCCCcCCCCCeEE---EccEEEEeecCCc
Q psy9487 24 LGEQAEAMGVEIYPGIPASEVLYHGD--GSVKGIATGDVGIAKDGSPKDTFARGMEL---HAKVTIFAEGCHG 91 (101)
Q Consensus 24 l~~~A~~~Gv~i~~gt~v~~i~~~~~--g~v~GV~~~~~g~~~~g~~~~~~~~g~~i---~A~~VI~A~G~~s 91 (101)
|...+++.|++|++++.|++|+++++ ++++||+..+ .+|+. ..+ .++.||+|+|+..
T Consensus 200 ~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~----~~g~~-------~~~~v~a~k~VILaaGa~~ 261 (536)
T 1ju2_A 200 LLNKGNSNNLRVGVHASVEKIIFSNAPGLTATGVIYRD----SNGTP-------HQAFVRSKGEVIVSAGTIG 261 (536)
T ss_dssp GGGGSCTTTEEEEESCEEEEEEECCSSSCBEEEEEEEC----TTSCE-------EEEEEEEEEEEEECCHHHH
T ss_pred hhhhhcCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEe----CCCce-------EEEEeccCCEEEEcCcccC
Confidence 45567788999999999999999632 3899999864 22321 345 4689999999874
No 117
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=96.89 E-value=0.0031 Score=48.32 Aligned_cols=59 Identities=17% Similarity=0.146 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 18 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 18 ~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
..+.+.|.+.+++.|++++++++|+++..+ ++. +.+.+.+ +.++.+|.||+|+|.++..
T Consensus 208 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~-~~~-v~v~~~~---------------g~~i~~D~vv~A~G~~p~~ 266 (455)
T 2yqu_A 208 LEVSRAAERVFKKQGLTIRTGVRVTAVVPE-AKG-ARVELEG---------------GEVLEADRVLVAVGRRPYT 266 (455)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEEE-TTE-EEEEETT---------------SCEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEEe-CCE-EEEEECC---------------CeEEEcCEEEECcCCCcCC
Confidence 456777888899999999999999999875 333 3455543 4679999999999988754
No 118
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.88 E-value=0.001 Score=53.87 Aligned_cols=62 Identities=19% Similarity=0.312 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEec---CCcEEEEEeccccccCCCCCCcCCCCCeEEEcc-EEEEeecCCc
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYHG---DGSVKGIATGDVGIAKDGSPKDTFARGMELHAK-VTIFAEGCHG 91 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~---~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~-~VI~A~G~~s 91 (101)
....+|.....+.+++|++++.|++|++++ +++++||+..+ .+|.. .+++|+ -||+|+|+-.
T Consensus 228 aa~ayL~p~~~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~----~~G~~-------~~v~A~kEVILsAGa~~ 293 (583)
T 3qvp_A 228 AAREWLLPNYQRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGT----HKGNT-------HNVYAKHEVLLAAGSAV 293 (583)
T ss_dssp HHHHHTTTTTTCTTEEEECSCEEEEEEEECSSSSCEEEEEEEES----STTCE-------EEEEEEEEEEECSCTTT
T ss_pred HHHHHHHHhhcCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEe----cCCcE-------EEEEECCEEEEeCCccC
Confidence 444555445566899999999999999963 57999999864 23332 578996 6999999764
No 119
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=96.82 E-value=0.0052 Score=47.24 Aligned_cols=57 Identities=21% Similarity=0.141 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
.+.+.|.+.+++.|++|+++++|+++..+ +....|.+.+ .++.+|.||+|.|.+...
T Consensus 217 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~~~~v~~~~----------------~~i~aD~Vv~a~G~~p~~ 273 (467)
T 1zk7_A 217 AIGEAVTAAFRAEGIEVLEHTQASQVAHM--DGEFVLTTTH----------------GELRADKLLVATGRTPNT 273 (467)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEEE--TTEEEEEETT----------------EEEEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEe--CCEEEEEECC----------------cEEEcCEEEECCCCCcCC
Confidence 46677888899999999999999999864 3344566542 579999999999998763
No 120
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=96.77 E-value=0.0029 Score=45.73 Aligned_cols=62 Identities=19% Similarity=0.156 Sum_probs=46.4
Q ss_pred EEhHHHHHHHHHHHHHCCCEEecCCceeEEEEec-CCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 15 VRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHG-DGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 15 v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~-~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
+.+..+.++|.+.+++.|++++. ..|.++..+. ++..+.|.+.+ |.++.++.||+|+|+++.
T Consensus 62 ~~~~~~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~~~~~~v~~~~---------------g~~~~~~~vv~AtG~~~~ 124 (325)
T 2q7v_A 62 IAGMELAQRMHQQAEKFGAKVEM-DEVQGVQHDATSHPYPFTVRGY---------------NGEYRAKAVILATGADPR 124 (325)
T ss_dssp BCHHHHHHHHHHHHHHTTCEEEE-CCEEEEEECTTSSSCCEEEEES---------------SCEEEEEEEEECCCEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCEEEe-eeEEEEEeccCCCceEEEEECC---------------CCEEEeCEEEECcCCCcC
Confidence 56788999999999999999998 5888887741 22212344433 457999999999998654
No 121
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=96.76 E-value=0.00025 Score=52.18 Aligned_cols=52 Identities=15% Similarity=0.239 Sum_probs=42.8
Q ss_pred cEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 12 NYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 12 ~~~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
++.++-..+.++|.++|++.|++|++ ++|+++..+ ..++|+.||+|+|+|+
T Consensus 136 ~~~v~p~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~----------------------------~~~~a~~VV~A~G~~s 186 (351)
T 3g3e_A 136 SLILEGKNYLQWLTERLTERGVKFFQ-RKVESFEEV----------------------------AREGADVIVNCTGVWA 186 (351)
T ss_dssp EEEECHHHHHHHHHHHHHHTTCEEEE-CCCCCHHHH----------------------------HHTTCSEEEECCGGGG
T ss_pred ceEEcHHHHHHHHHHHHHHCCCEEEE-EEeCCHHHh----------------------------hcCCCCEEEECCCcCh
Confidence 46788899999999999999999998 888776321 1257899999999998
Q ss_pred h
Q psy9487 92 H 92 (101)
Q Consensus 92 ~ 92 (101)
.
T Consensus 187 ~ 187 (351)
T 3g3e_A 187 G 187 (351)
T ss_dssp G
T ss_pred H
Confidence 5
No 122
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=96.76 E-value=0.0046 Score=44.58 Aligned_cols=60 Identities=10% Similarity=0.089 Sum_probs=45.5
Q ss_pred HHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 22 KWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 22 ~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
..+.+++++.|++++++++++++..+ ++++.+|.+.+. .+|+ ..++.+|.||+|+|....
T Consensus 194 ~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~---~~g~-------~~~i~~D~vi~a~G~~p~ 253 (319)
T 3cty_A 194 NAYVQEIKKRNIPYIMNAQVTEIVGD-GKKVTGVKYKDR---TTGE-------EKLIETDGVFIYVGLIPQ 253 (319)
T ss_dssp HHHHHHHHHTTCCEECSEEEEEEEES-SSSEEEEEEEET---TTCC-------EEEECCSEEEECCCEEEC
T ss_pred HHHHHHHhcCCcEEEcCCeEEEEecC-CceEEEEEEEEc---CCCc-------eEEEecCEEEEeeCCccC
Confidence 45677888999999999999999874 567888887531 1222 147999999999997654
No 123
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=96.74 E-value=0.0047 Score=44.31 Aligned_cols=60 Identities=17% Similarity=0.137 Sum_probs=45.4
Q ss_pred HHHHHHHHHC-CCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 22 KWLGEQAEAM-GVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 22 ~~l~~~A~~~-Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
..+.+++.+. |++|++++.+.++.-+ ++++.+|.+.+. .+|+ +.++.+|.||+|.|....
T Consensus 212 ~~~~~~l~~~~gv~i~~~~~v~~i~~~-~~~~~~v~~~~~---~~g~-------~~~i~~D~vi~a~G~~p~ 272 (338)
T 3itj_A 212 TIMQKRAEKNEKIEILYNTVALEAKGD-GKLLNALRIKNT---KKNE-------ETDLPVSGLFYAIGHTPA 272 (338)
T ss_dssp HHHHHHHHHCTTEEEECSEEEEEEEES-SSSEEEEEEEET---TTTE-------EEEEECSEEEECSCEEEC
T ss_pred HHHHHHHHhcCCeEEeecceeEEEEcc-cCcEEEEEEEEC---CCCc-------eEEEEeCEEEEEeCCCCC
Confidence 4456677665 9999999999999874 677888888651 1222 368999999999997653
No 124
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=96.73 E-value=0.0049 Score=47.65 Aligned_cols=58 Identities=17% Similarity=0.139 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCe-EEEccEEEEeecCCchh
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGM-ELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~-~i~A~~VI~A~G~~s~l 93 (101)
.+.+.|.+..++.|+++++++.|+++..+ ++. ..|.+.+ |. ++.+|.||+|+|.....
T Consensus 208 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~-~~v~~~~---------------G~~~i~~D~vv~a~G~~p~~ 266 (463)
T 2r9z_A 208 LLSATLAENMHAQGIETHLEFAVAALERD-AQG-TTLVAQD---------------GTRLEGFDSVIWAVGRAPNT 266 (463)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEEEE-TTE-EEEEETT---------------CCEEEEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEe-CCe-EEEEEeC---------------CcEEEEcCEEEECCCCCcCC
Confidence 45567788889999999999999999875 333 4566654 45 79999999999987654
No 125
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=96.69 E-value=0.0071 Score=46.89 Aligned_cols=56 Identities=13% Similarity=0.216 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
.+.+.|.+.+++.|++|++++.|+++.. ++++..|.+.+ .++.+|.||+|+|....
T Consensus 228 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~--~~~v~~v~~~~----------------~~i~~D~vi~a~G~~p~ 283 (480)
T 3cgb_A 228 DMAEYIYKEADKHHIEILTNENVKAFKG--NERVEAVETDK----------------GTYKADLVLVSVGVKPN 283 (480)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEE--SSBEEEEEETT----------------EEEECSEEEECSCEEES
T ss_pred HHHHHHHHHHHHcCcEEEcCCEEEEEEc--CCcEEEEEECC----------------CEEEcCEEEECcCCCcC
Confidence 4567788899999999999999999975 35676676642 57999999999998754
No 126
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=96.68 E-value=0.00066 Score=50.12 Aligned_cols=51 Identities=12% Similarity=0.124 Sum_probs=42.9
Q ss_pred cEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 12 NYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 12 ~~~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
++.++...+.++|+++|++.|++|+. ++|+++.. + . . +|+.||+|+|+|+
T Consensus 136 ~~~v~p~~~~~~l~~~~~~~G~~i~~-~~v~~l~~--~---------~----------------~--~a~~VV~A~G~~s 185 (363)
T 1c0p_A 136 TLSVHAPKYCQYLARELQKLGATFER-RTVTSLEQ--A---------F----------------D--GADLVVNATGLGA 185 (363)
T ss_dssp EEECCHHHHHHHHHHHHHHTTCEEEE-CCCSBGGG--T---------C----------------S--SCSEEEECCGGGG
T ss_pred cceecHHHHHHHHHHHHHHCCCEEEE-EEcccHhh--c---------C----------------c--CCCEEEECCCcch
Confidence 46788999999999999999999999 88888742 1 1 2 6899999999998
Q ss_pred h
Q psy9487 92 H 92 (101)
Q Consensus 92 ~ 92 (101)
.
T Consensus 186 ~ 186 (363)
T 1c0p_A 186 K 186 (363)
T ss_dssp G
T ss_pred h
Confidence 5
No 127
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.67 E-value=0.0032 Score=49.63 Aligned_cols=63 Identities=21% Similarity=0.261 Sum_probs=49.2
Q ss_pred EEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecC-CcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 15 VRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGD-GSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 15 v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~-g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
..+..+.++|.+.+++.|++++.+++|+.+..+.+ +....|.+.+ |.+++++.||+|+|++..
T Consensus 264 ~~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~---------------g~~~~~d~vVlAtG~~~~ 327 (521)
T 1hyu_A 264 TEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETAS---------------GAVLKARSIIIATGAKWR 327 (521)
T ss_dssp BCHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETT---------------SCEEEEEEEEECCCEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECC---------------CCEEEcCEEEECCCCCcC
Confidence 45678889999999999999999999999975321 2234566654 468999999999998654
No 128
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.65 E-value=0.00081 Score=54.11 Aligned_cols=58 Identities=21% Similarity=0.369 Sum_probs=43.9
Q ss_pred HHHHHHHHCCCEEecCCceeEEEEecC---CcEEEEEeccccccCCCCCCcCCCCCeEEEc-cEEEEeecCCc
Q psy9487 23 WLGEQAEAMGVEIYPGIPASEVLYHGD---GSVKGIATGDVGIAKDGSPKDTFARGMELHA-KVTIFAEGCHG 91 (101)
Q Consensus 23 ~l~~~A~~~Gv~i~~gt~v~~i~~~~~---g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A-~~VI~A~G~~s 91 (101)
+|...+++.|++|++++.|++|+++++ ++++||+..+ .+|+. ..++| +.||+|+|+..
T Consensus 236 ~l~~~~~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~----~~g~~-------~~v~A~k~VILaaG~~~ 297 (587)
T 1gpe_A 236 WLLPNYQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGT----NKAVN-------FDVFAKHEVLLAAGSAI 297 (587)
T ss_dssp HTTTTTTCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEE----ETTEE-------EEEEEEEEEEECSCTTT
T ss_pred HHHHhhcCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEe----CCCcE-------EEEEecccEEEccCCCC
Confidence 333445568999999999999999642 4899999874 22321 57899 89999999865
No 129
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.63 E-value=0.0089 Score=46.61 Aligned_cols=59 Identities=19% Similarity=0.165 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeE-EEccEEEEeecCCchh
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGME-LHAKVTIFAEGCHGHL 93 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~-i~A~~VI~A~G~~s~l 93 (101)
.+.+.+.+..++.|+++++++.++++.-++++. ..|.+.+ |.+ +.+|.||+|.|.....
T Consensus 218 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~-~~v~~~~---------------g~~~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 218 SVINVLENDMKKNNINIVTFADVVEIKKVSDKN-LSIHLSD---------------GRIYEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEESSTTC-EEEEETT---------------SCEEEEESEEEECCCBCCTT
T ss_pred hhHHHHHHHHHhCCCEEEECCEEEEEEEcCCce-EEEEECC---------------CcEEEECCEEEECCCCCcCC
Confidence 456677888899999999999999998642333 4566654 455 9999999999987653
No 130
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=96.60 E-value=0.0073 Score=46.47 Aligned_cols=65 Identities=20% Similarity=0.175 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
.+.+.|.+..++.|++|++++.|+++..++++..+.|.+.+. .+|+ +.++.+|.||+|.|.....
T Consensus 225 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~---~~g~-------~~~~~~D~vv~a~G~~p~~ 289 (478)
T 1v59_A 225 EVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDT---KTNK-------QENLEAEVLLVAVGRRPYI 289 (478)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEET---TTTE-------EEEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEc---CCCC-------ceEEECCEEEECCCCCcCC
Confidence 466778888999999999999999997621345556665420 0111 3679999999999987653
No 131
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=96.58 E-value=0.0048 Score=44.10 Aligned_cols=60 Identities=17% Similarity=0.127 Sum_probs=45.2
Q ss_pred HHHHHHHHHH-CCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 21 VKWLGEQAEA-MGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 21 d~~l~~~A~~-~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
+..+.++.++ .|+++++++.++++.-+ ++++.+|++.+. .+|+ ..++.+|.||+|.|...
T Consensus 182 ~~~~~~~l~~~~gv~v~~~~~v~~i~~~-~~~v~~v~~~~~---~~g~-------~~~i~~D~vi~a~G~~p 242 (310)
T 1fl2_A 182 DQVLQDKLRSLKNVDIILNAQTTEVKGD-GSKVVGLEYRDR---VSGD-------IHNIELAGIFVQIGLLP 242 (310)
T ss_dssp CHHHHHHHHTCTTEEEESSEEEEEEEES-SSSEEEEEEEET---TTCC-------EEEEECSEEEECSCEEE
T ss_pred cHHHHHHHhhCCCeEEecCCceEEEEcC-CCcEEEEEEEEC---CCCc-------EEEEEcCEEEEeeCCcc
Confidence 3556677777 69999999999999864 678888888641 1222 15799999999999654
No 132
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=96.54 E-value=0.0063 Score=44.66 Aligned_cols=62 Identities=11% Similarity=0.186 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
.+-+.|.+..++.|+++++++.+.++..+ ++++.+|.+.. .+|+ ..++.+|.||+|.|....
T Consensus 203 ~~~~~l~~~~~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~----~~g~-------~~~i~~D~vi~a~G~~p~ 264 (360)
T 3ab1_A 203 KTAHEVERARANGTIDVYLETEVASIEES-NGVLTRVHLRS----SDGS-------KWTVEADRLLILIGFKSN 264 (360)
T ss_dssp HHHHSSHHHHHHTSEEEESSEEEEEEEEE-TTEEEEEEEEE----TTCC-------EEEEECSEEEECCCBCCS
T ss_pred HHHHHHHHHhhcCceEEEcCcCHHHhccC-CCceEEEEEEe----cCCC-------eEEEeCCEEEECCCCCCC
Confidence 34556777888899999999999999875 67887888751 1222 157999999999997654
No 133
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=96.54 E-value=0.0033 Score=47.86 Aligned_cols=70 Identities=11% Similarity=0.093 Sum_probs=51.0
Q ss_pred EEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEec-CCcEE--EEEeccccccCCCCCCcCCCCCeEEEccEEEEeecC
Q psy9487 13 YVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHG-DGSVK--GIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGC 89 (101)
Q Consensus 13 ~~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~-~g~v~--GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~ 89 (101)
+...+..+.++|...+++.|++++.+++|+++..++ +++.+ .|.+.+ .+|+ ..++.++.||+|+|.
T Consensus 122 ~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~----g~g~-------~~~~~~d~lVlAtG~ 190 (463)
T 3s5w_A 122 FYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRN----ADGE-------ELVRTTRALVVSPGG 190 (463)
T ss_dssp SCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEE----TTSC-------EEEEEESEEEECCCC
T ss_pred CCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEec----CCCc-------eEEEEeCEEEECCCC
Confidence 345788999999999999999999999999998742 24544 344433 1121 138999999999998
Q ss_pred Cchh
Q psy9487 90 HGHL 93 (101)
Q Consensus 90 ~s~l 93 (101)
...+
T Consensus 191 ~p~~ 194 (463)
T 3s5w_A 191 TPRI 194 (463)
T ss_dssp EECC
T ss_pred CCCC
Confidence 5543
No 134
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=96.53 E-value=0.0063 Score=43.84 Aligned_cols=59 Identities=17% Similarity=0.196 Sum_probs=45.7
Q ss_pred EEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 15 VRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 15 v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
+.+..+.+.+.+.+++.|++++. ..|.++..+ ++.+. |.+. +.++.++.+|+|+|+++.
T Consensus 69 ~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~-~~~~~-v~~~----------------~~~~~~~~li~AtG~~~~ 127 (319)
T 3cty_A 69 IVGSELAKLFADHAANYAKIREG-VEVRSIKKT-QGGFD-IETN----------------DDTYHAKYVIITTGTTHK 127 (319)
T ss_dssp BCHHHHHHHHHHHHHTTSEEEET-CCEEEEEEE-TTEEE-EEES----------------SSEEEEEEEEECCCEEEC
T ss_pred cCHHHHHHHHHHHHHHcCCEEEE-eeEEEEEEe-CCEEE-EEEC----------------CCEEEeCEEEECCCCCcc
Confidence 45677888889999999999998 689999875 44332 5542 357999999999998654
No 135
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=96.52 E-value=0.0078 Score=43.11 Aligned_cols=63 Identities=21% Similarity=0.240 Sum_probs=48.2
Q ss_pred EEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 15 VRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 15 v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
+.+..+..+|.+.+++.|++++.++ |.++..+ ++.+. +.+... .+ +..+.++.+|+|+|++..
T Consensus 81 ~~~~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~-~~~~~-v~~~~~---~~---------~~~~~~d~vvlAtG~~~~ 143 (338)
T 3itj_A 81 LTGSELMDRMREQSTKFGTEIITET-VSKVDLS-SKPFK-LWTEFN---ED---------AEPVTTDAIILATGASAK 143 (338)
T ss_dssp EEHHHHHHHHHHHHHHTTCEEECSC-EEEEECS-SSSEE-EEETTC---SS---------SCCEEEEEEEECCCEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCEEEEeE-EEEEEEc-CCEEE-EEEEec---CC---------CcEEEeCEEEECcCCCcC
Confidence 6788899999999999999999998 9998774 44443 555320 01 357999999999998654
No 136
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=96.50 E-value=0.0065 Score=43.81 Aligned_cols=46 Identities=13% Similarity=0.083 Sum_probs=35.1
Q ss_pred CCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEE-EccEEEEeecCCchhh
Q psy9487 32 GVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMEL-HAKVTIFAEGCHGHLT 94 (101)
Q Consensus 32 Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i-~A~~VI~A~G~~s~l~ 94 (101)
|++|+++++|+++..+ ++.+. |.+.+ |..+ .|+.||+|+|+++.+.
T Consensus 119 g~~i~~~~~v~~i~~~-~~~~~-v~~~~---------------g~~~~~a~~vV~a~g~~~~~~ 165 (336)
T 1yvv_A 119 DMPVSFSCRITEVFRG-EEHWN-LLDAE---------------GQNHGPFSHVIIATPAPQAST 165 (336)
T ss_dssp TCCEECSCCEEEEEEC-SSCEE-EEETT---------------SCEEEEESEEEECSCHHHHGG
T ss_pred cCcEEecCEEEEEEEe-CCEEE-EEeCC---------------CcCccccCEEEEcCCHHHHHH
Confidence 9999999999999986 44443 66543 3344 5999999999987664
No 137
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=96.47 E-value=0.0036 Score=46.96 Aligned_cols=52 Identities=15% Similarity=0.173 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecC
Q psy9487 20 VVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGC 89 (101)
Q Consensus 20 ~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~ 89 (101)
+.+.+...+++.| +|+++++|++|..+ ++.+. |.+.+ |.++.||.||+|.|.
T Consensus 206 ~~~l~~~~~~~~g-~i~~~~~V~~i~~~-~~~v~-v~~~~---------------g~~~~ad~vi~a~~~ 257 (431)
T 3k7m_X 206 SADLVDAMSQEIP-EIRLQTVVTGIDQS-GDVVN-VTVKD---------------GHAFQAHSVIVATPM 257 (431)
T ss_dssp THHHHHHHHTTCS-CEESSCCEEEEECS-SSSEE-EEETT---------------SCCEEEEEEEECSCG
T ss_pred HHHHHHHHHhhCC-ceEeCCEEEEEEEc-CCeEE-EEECC---------------CCEEEeCEEEEecCc
Confidence 3455555566778 99999999999875 45554 77654 456999999999993
No 138
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=96.46 E-value=0.0081 Score=45.60 Aligned_cols=53 Identities=15% Similarity=0.287 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
.+.+++.+..++.|++|++++.++++. + + +|.+.+ |.++.+|.||+|.|....
T Consensus 188 ~~~~~l~~~l~~~GV~i~~~~~v~~i~-~--~---~v~~~~---------------g~~i~~D~vi~a~G~~p~ 240 (408)
T 2gqw_A 188 TLADFVARYHAAQGVDLRFERSVTGSV-D--G---VVLLDD---------------GTRIAADMVVVGIGVLAN 240 (408)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEE-T--T---EEEETT---------------SCEEECSEEEECSCEEEC
T ss_pred HHHHHHHHHHHHcCcEEEeCCEEEEEE-C--C---EEEECC---------------CCEEEcCEEEECcCCCcc
Confidence 456778888999999999999999987 4 3 566654 468999999999998754
No 139
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=96.43 E-value=0.0074 Score=42.83 Aligned_cols=53 Identities=21% Similarity=0.184 Sum_probs=41.1
Q ss_pred HHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 28 AEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 28 A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
.++.|++|++++.+.++.-+ ++++.+|.+.. .+|+. .++.+|.||+|.|....
T Consensus 193 ~~~~gv~~~~~~~v~~i~~~-~~~~~~v~~~~----~~g~~-------~~~~~D~vv~a~G~~p~ 245 (315)
T 3r9u_A 193 KKNEKIELITSASVDEVYGD-KMGVAGVKVKL----KDGSI-------RDLNVPGIFTFVGLNVR 245 (315)
T ss_dssp HHCTTEEEECSCEEEEEEEE-TTEEEEEEEEC----TTSCE-------EEECCSCEEECSCEEEC
T ss_pred HhcCCeEEEeCcEEEEEEcC-CCcEEEEEEEc----CCCCe-------EEeecCeEEEEEcCCCC
Confidence 36789999999999999875 67888888762 22321 47999999999997543
No 140
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=96.39 E-value=0.0085 Score=42.86 Aligned_cols=60 Identities=18% Similarity=0.240 Sum_probs=45.9
Q ss_pred EEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 15 VRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 15 v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
+.+..+.+++.+.+++.|++++.++ |..+..+ ++.+. | +.+ +.++.++.+|+|+|+++..
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~-v~~i~~~-~~~~~-v-~~~---------------~~~~~~~~lv~AtG~~~~~ 118 (320)
T 1trb_A 59 LTGPLLMERMHEHATKFETEIIFDH-INKVDLQ-NRPFR-L-NGD---------------NGEYTCDALIIATGASARY 118 (320)
T ss_dssp CBHHHHHHHHHHHHHHTTCEEECCC-EEEEECS-SSSEE-E-EES---------------SCEEEEEEEEECCCEEECC
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEee-eeEEEec-CCEEE-E-EeC---------------CCEEEcCEEEECCCCCcCC
Confidence 5677888999999999999999986 8888764 34432 3 332 3579999999999987543
No 141
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.29 E-value=0.0032 Score=50.75 Aligned_cols=61 Identities=8% Similarity=0.213 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEe---cC-CcEEEEEeccccccCCC-CCCcCCCCCeEEEc-cEEEEeecCC
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYH---GD-GSVKGIATGDVGIAKDG-SPKDTFARGMELHA-KVTIFAEGCH 90 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~---~~-g~v~GV~~~~~g~~~~g-~~~~~~~~g~~i~A-~~VI~A~G~~ 90 (101)
....+|.....+.+++|++++.|++|+++ ++ ++++||+..+ .+| . ..+++| +-||+|+|+-
T Consensus 209 a~~ayL~p~~~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~----~~g~~-------~~~v~A~kEVILsAGai 275 (566)
T 3fim_B 209 SSTAYLRPAQSRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAE----QEGAP-------TTTVCAKKEVVLSAGSV 275 (566)
T ss_dssp HHHHTHHHHTTCTTEEEESSCEEEEEECCEEETTEEECCEEEEES----STTSC-------CEEEEEEEEEEECCHHH
T ss_pred HHHHHhhhhccCCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEE----CCCce-------EEEEEeeeEEEEecCCc
Confidence 34445444445679999999999999995 13 6899999875 222 2 267999 6799999954
No 142
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=96.27 E-value=0.006 Score=46.64 Aligned_cols=57 Identities=23% Similarity=0.257 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 18 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 18 ~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
..+.+.+.+.+++.|+++++++.|+++.. ++++..|.+. +.++.+|.||+|+|....
T Consensus 191 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~--~~~v~~v~~~----------------~~~i~~d~vi~a~G~~p~ 247 (447)
T 1nhp_A 191 KEFTDVLTEEMEANNITIATGETVERYEG--DGRVQKVVTD----------------KNAYDADLVVVAVGVRPN 247 (447)
T ss_dssp HHHHHHHHHHHHTTTEEEEESCCEEEEEC--SSBCCEEEES----------------SCEEECSEEEECSCEEES
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEc--cCcEEEEEEC----------------CCEEECCEEEECcCCCCC
Confidence 35667788889999999999999999975 3555556653 357999999999998764
No 143
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=96.26 E-value=0.016 Score=45.26 Aligned_cols=59 Identities=22% Similarity=0.349 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEe------------------cCCcEEEEEeccccccCCCCCCcCCCCCeEEE
Q psy9487 18 GHVVKWLGEQAEAMGVEIYPGIPASEVLYH------------------GDGSVKGIATGDVGIAKDGSPKDTFARGMELH 79 (101)
Q Consensus 18 ~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~------------------~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~ 79 (101)
..+.+++.+.+++.|+++++++.++++..+ +++++. +...+ |.++.
T Consensus 192 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~---------------g~~i~ 255 (565)
T 3ntd_A 192 REMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLS-LTLSN---------------GELLE 255 (565)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEE-EEETT---------------SCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEE-EEEcC---------------CCEEE
Confidence 345667788889999999999999999763 134433 44433 46899
Q ss_pred ccEEEEeecCCch
Q psy9487 80 AKVTIFAEGCHGH 92 (101)
Q Consensus 80 A~~VI~A~G~~s~ 92 (101)
+|.||+|.|....
T Consensus 256 ~D~vi~a~G~~p~ 268 (565)
T 3ntd_A 256 TDLLIMAIGVRPE 268 (565)
T ss_dssp ESEEEECSCEEEC
T ss_pred cCEEEECcCCccc
Confidence 9999999998765
No 144
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=96.24 E-value=0.012 Score=45.25 Aligned_cols=64 Identities=8% Similarity=0.076 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
.+.+.+.+..++.|++|++++.|+++..+ ++..+.|...+. .+++ +.++.+|.||+|.|.....
T Consensus 221 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~~~~~v~~~~~---~~~~-------~~~i~~D~vv~a~G~~p~~ 284 (474)
T 1zmd_A 221 EISKNFQRILQKQGFKFKLNTKVTGATKK-SDGKIDVSIEAA---SGGK-------AEVITCDVLLVCIGRRPFT 284 (474)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEEC-TTSCEEEEEEET---TSCC-------CEEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHHCCCEEEeCceEEEEEEc-CCceEEEEEEec---CCCC-------ceEEEcCEEEECcCCCcCC
Confidence 45667788889999999999999999875 333233553210 0111 4689999999999987653
No 145
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=96.23 E-value=0.0068 Score=46.49 Aligned_cols=56 Identities=20% Similarity=0.195 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHC--------CCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecC
Q psy9487 18 GHVVKWLGEQAEAM--------GVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGC 89 (101)
Q Consensus 18 ~~~d~~l~~~A~~~--------Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~ 89 (101)
..+.+.|++...+. |++|+++++|++|..+ ++.+. |.+.+ |.++.|+.||+|.+.
T Consensus 206 ~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~-~~~v~-v~~~~---------------g~~~~ad~vI~a~~~ 268 (472)
T 1b37_A 206 EAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYS-PGGVT-VKTED---------------NSVYSADYVMVSASL 268 (472)
T ss_dssp THHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEEC-SSCEE-EEETT---------------SCEEEESEEEECSCH
T ss_pred HHHHHHHHHhccccccccccccccEEEcCCEEEEEEEc-CCcEE-EEECC---------------CCEEEcCEEEEecCH
Confidence 35566666665544 7899999999999986 56655 77765 468999999999886
Q ss_pred C
Q psy9487 90 H 90 (101)
Q Consensus 90 ~ 90 (101)
+
T Consensus 269 ~ 269 (472)
T 1b37_A 269 G 269 (472)
T ss_dssp H
T ss_pred H
Confidence 4
No 146
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=96.18 E-value=0.0078 Score=43.81 Aligned_cols=60 Identities=20% Similarity=0.190 Sum_probs=45.3
Q ss_pred EEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEE-EeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 15 VRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGI-ATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 15 v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV-~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
+.+..+.++|.+.+++.|++++.++ |.++.. ++. ..| .+.+ +.++.++.||+|+|+++..
T Consensus 68 ~~~~~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~~~--~~v~~~~~---------------g~~~~~d~lviAtG~~~~~ 128 (335)
T 2a87_A 68 ITGPELMDEMREQALRFGADLRMED-VESVSL-HGP--LKSVVTAD---------------GQTHRARAVILAMGAAARY 128 (335)
T ss_dssp BCHHHHHHHHHHHHHHTTCEEECCC-EEEEEC-SSS--SEEEEETT---------------SCEEEEEEEEECCCEEECC
T ss_pred CCHHHHHHHHHHHHHHcCCEEEEee-EEEEEe-CCc--EEEEEeCC---------------CCEEEeCEEEECCCCCccC
Confidence 5677888899999999999999997 888765 222 223 4433 3579999999999987643
No 147
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=96.18 E-value=0.027 Score=40.59 Aligned_cols=63 Identities=16% Similarity=0.070 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 18 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 18 ~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
..+.+.|.+..++.|+++++++.+.++.- ++++.+|.+... .+|+ ..++.+|.||+|.|....
T Consensus 191 ~~~~~~l~~~l~~~gv~v~~~~~v~~i~~--~~~~~~v~~~~~---~~g~-------~~~i~~D~vi~a~G~~p~ 253 (335)
T 2zbw_A 191 EASVKELMKAHEEGRLEVLTPYELRRVEG--DERVRWAVVFHN---QTQE-------ELALEVDAVLILAGYITK 253 (335)
T ss_dssp HHHHHHHHHHHHTTSSEEETTEEEEEEEE--SSSEEEEEEEET---TTCC-------EEEEECSEEEECCCEEEE
T ss_pred HHHHHHHHhccccCCeEEecCCcceeEcc--CCCeeEEEEEEC---CCCc-------eEEEecCEEEEeecCCCC
Confidence 34556677778888999999999999976 467777877531 1222 157999999999997764
No 148
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=96.14 E-value=0.0054 Score=49.49 Aligned_cols=52 Identities=17% Similarity=0.412 Sum_probs=40.1
Q ss_pred HHCCCEEecCCceeEEEEec-CCcEEEEEeccccccCCCCCCcCCCCCeEEEc-cEEEEeecCCc
Q psy9487 29 EAMGVEIYPGIPASEVLYHG-DGSVKGIATGDVGIAKDGSPKDTFARGMELHA-KVTIFAEGCHG 91 (101)
Q Consensus 29 ~~~Gv~i~~gt~v~~i~~~~-~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A-~~VI~A~G~~s 91 (101)
.+.+++|++++.|++|++++ +++++||+..+ .+|.. .+++| +-||+|+|+-.
T Consensus 217 ~r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~----~~g~~-------~~v~A~keVILsaGa~~ 270 (577)
T 3q9t_A 217 NKPNITIVPEVHSKRLIINEADRTCKGVTVVT----AAGNE-------LNFFADREVILSQGVFE 270 (577)
T ss_dssp SCTTEEEECSEEEEEEEEETTTTEEEEEEEEE----TTSCE-------EEEEEEEEEEECSHHHH
T ss_pred cCCCeEEEcCcEEEEEEEeCCCCEEEEEEEEe----CCCcE-------EEEEeeeEEEEcccccC
Confidence 34689999999999999964 57999999875 22332 57889 56999999653
No 149
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=96.12 E-value=0.014 Score=42.65 Aligned_cols=54 Identities=9% Similarity=0.167 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecC
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGC 89 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~ 89 (101)
-+.+.+..-++..|++|+++++|++|..+ ++.+. |.+.+ |..+.++.||+|..+
T Consensus 110 g~~~l~~~l~~~~g~~i~~~~~V~~i~~~-~~~~~-v~~~~---------------g~~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 110 GISSIIKHYLKESGAEVYFRHRVTQINLR-DDKWE-VSKQT---------------GSPEQFDLIVLTMPV 163 (342)
T ss_dssp CTTHHHHHHHHHHTCEEESSCCEEEEEEC-SSSEE-EEESS---------------SCCEEESEEEECSCH
T ss_pred CHHHHHHHHHHhcCCEEEeCCEEEEEEEc-CCEEE-EEECC---------------CCEEEcCEEEECCCH
Confidence 33444344444559999999999999985 55544 66654 345899999999764
No 150
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=96.10 E-value=0.023 Score=43.58 Aligned_cols=62 Identities=10% Similarity=0.067 Sum_probs=44.3
Q ss_pred HHHHHHHHHH-HHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 19 HVVKWLGEQA-EAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 19 ~~d~~l~~~A-~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
.+.+.|.+.. ++.|++|++++.|+++..+ ++. +.|.+.+ .+|+ ..++.+|.||+|.|.....
T Consensus 216 ~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~-~~~-~~v~~~~----~~g~-------~~~i~~D~vv~a~G~~p~~ 278 (468)
T 2qae_A 216 DVTNALVGALAKNEKMKFMTSTKVVGGTNN-GDS-VSLEVEG----KNGK-------RETVTCEALLVSVGRRPFT 278 (468)
T ss_dssp HHHHHHHHHHHHHTCCEEECSCEEEEEEEC-SSS-EEEEEEC----C----------EEEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHhhcCCcEEEeCCEEEEEEEc-CCe-EEEEEEc----CCCc-------eEEEECCEEEECCCcccCC
Confidence 4566778888 8999999999999999874 333 3355431 1121 1579999999999987653
No 151
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=96.09 E-value=0.0079 Score=46.67 Aligned_cols=53 Identities=15% Similarity=-0.038 Sum_probs=39.9
Q ss_pred HHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 22 KWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 22 ~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
++...-+++.|++|+++++|++|..+ ++++. |.+.+ |.++.||.||+|.+.+.
T Consensus 216 ~l~~~l~~~lg~~i~~~~~V~~i~~~-~~~v~-v~~~~---------------g~~~~ad~VI~a~p~~~ 268 (520)
T 1s3e_A 216 QVSERIMDLLGDRVKLERPVIYIDQT-RENVL-VETLN---------------HEMYEAKYVISAIPPTL 268 (520)
T ss_dssp HHHHHHHHHHGGGEESSCCEEEEECS-SSSEE-EEETT---------------SCEEEESEEEECSCGGG
T ss_pred HHHHHHHHHcCCcEEcCCeeEEEEEC-CCeEE-EEECC---------------CeEEEeCEEEECCCHHH
Confidence 33333445568999999999999885 56665 77654 46899999999988764
No 152
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=96.09 E-value=0.013 Score=45.49 Aligned_cols=57 Identities=25% Similarity=0.352 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
.+.+.+.+..++.|++|++++.++++.. ++++..|.+ + +.++.+|.||+|.|.....
T Consensus 237 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~v~~v~~-~---------------g~~i~~D~Vi~a~G~~p~~ 293 (490)
T 2bc0_A 237 DLTDLMAKNMEEHGIQLAFGETVKEVAG--NGKVEKIIT-D---------------KNEYDVDMVILAVGFRPNT 293 (490)
T ss_dssp HHHHHHHHHHHTTTCEEEETCCEEEEEC--SSSCCEEEE-S---------------SCEEECSEEEECCCEEECC
T ss_pred HHHHHHHHHHHhCCeEEEeCCEEEEEEc--CCcEEEEEE-C---------------CcEEECCEEEECCCCCcCh
Confidence 4556778888999999999999999874 456656665 3 3679999999999976543
No 153
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.05 E-value=0.0088 Score=46.92 Aligned_cols=72 Identities=10% Similarity=0.077 Sum_probs=54.8
Q ss_pred CcEEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCC------cEEEEEeccccccCCCCCCcCCCCCeEEEccEEE
Q psy9487 11 GNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDG------SVKGIATGDVGIAKDGSPKDTFARGMELHAKVTI 84 (101)
Q Consensus 11 ~~~~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g------~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI 84 (101)
..+...|..|.++|..-|+..+..|..+++|+++.+++++ ...-|++.+ ..+|+ ..++.|+.||
T Consensus 138 ~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~---~~~g~-------~~~~~ar~vV 207 (501)
T 4b63_A 138 STFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRN---VETGE-------ISARRTRKVV 207 (501)
T ss_dssp CCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEE---TTTCC-------EEEEEEEEEE
T ss_pred cCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEec---CCCce-------EEEEEeCEEE
Confidence 3466889999999999999999889999999999886432 245677654 12333 3679999999
Q ss_pred EeecCCch
Q psy9487 85 FAEGCHGH 92 (101)
Q Consensus 85 ~A~G~~s~ 92 (101)
+|+|....
T Consensus 208 latG~~P~ 215 (501)
T 4b63_A 208 IAIGGTAK 215 (501)
T ss_dssp ECCCCEEC
T ss_pred ECcCCCCC
Confidence 99996433
No 154
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.02 E-value=0.006 Score=47.65 Aligned_cols=50 Identities=18% Similarity=0.213 Sum_probs=41.1
Q ss_pred HHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 26 EQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 26 ~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
+++++.||+|++++.|.++.- ++++.+|.+.+ |.++.+|.||+|.|.+..
T Consensus 265 ~~l~~~GV~v~~~~~v~~i~~--~~~v~~v~~~~---------------g~~i~aD~Vv~a~G~~p~ 314 (493)
T 1y56_A 265 QELERWGIDYVHIPNVKRVEG--NEKVERVIDMN---------------NHEYKVDALIFADGRRPD 314 (493)
T ss_dssp HHHHHHTCEEEECSSEEEEEC--SSSCCEEEETT---------------CCEEECSEEEECCCEEEC
T ss_pred HHHHhCCcEEEeCCeeEEEec--CCceEEEEeCC---------------CeEEEeCEEEECCCcCcC
Confidence 677889999999999999974 35666777654 468999999999998765
No 155
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=96.00 E-value=0.02 Score=40.16 Aligned_cols=61 Identities=18% Similarity=0.134 Sum_probs=47.0
Q ss_pred EEhHHHHHHHHHHHHHC-CCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 15 VRLGHVVKWLGEQAEAM-GVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 15 v~r~~~d~~l~~~A~~~-Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
.....+.+++.+.+++. +++++.+ +|+++..+ ++. ..|.+.+ +.++.++.||+|+|+.+..
T Consensus 53 ~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i~~~-~~~-~~v~~~~---------------g~~~~~d~vviAtG~~~~~ 114 (297)
T 3fbs_A 53 KAPGEIIAEARRQIERYPTIHWVEG-RVTDAKGS-FGE-FIVEIDG---------------GRRETAGRLILAMGVTDEL 114 (297)
T ss_dssp CCHHHHHHHHHHHHTTCTTEEEEES-CEEEEEEE-TTE-EEEEETT---------------SCEEEEEEEEECCCCEEEC
T ss_pred CCHHHHHHHHHHHHHhcCCeEEEEe-EEEEEEEc-CCe-EEEEECC---------------CCEEEcCEEEECCCCCCCC
Confidence 56678888999999987 7888765 89999875 333 4466654 4679999999999997643
No 156
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=95.86 E-value=0.0096 Score=48.26 Aligned_cols=53 Identities=15% Similarity=0.368 Sum_probs=41.3
Q ss_pred CCCEEecCCceeEEEEecC-CcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 31 MGVEIYPGIPASEVLYHGD-GSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 31 ~Gv~i~~gt~v~~i~~~~~-g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
.|++|++++.|++|+.+++ ++++||++.+. ++|+. .++.|+.||+|+|+....
T Consensus 273 ~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~---~~g~~-------~~i~A~~VIlaaG~~~s~ 326 (623)
T 3pl8_A 273 ERFNLFPAVACERVVRNALNSEIESLHIHDL---ISGDR-------FEIKADVYVLTAGAVHNT 326 (623)
T ss_dssp EEEEEECSEEEEEEEECTTSSCEEEEEEEET---TTCCE-------EEECEEEEEECSCTTHHH
T ss_pred CCEEEEeCCEEEEEEEECCCCEEEEEEEEEc---CCCcE-------EEEECCEEEEcCCCcCCH
Confidence 4899999999999999632 38999998751 23332 589999999999976544
No 157
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=95.82 E-value=0.021 Score=45.21 Aligned_cols=57 Identities=12% Similarity=0.117 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 18 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 18 ~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
..+.+.|.+..++.|++|++++.|+++..+ ++ +|.+.+ |.++.+|.||+|.|.....
T Consensus 228 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~---~v~~~~---------------g~~i~~D~Vi~a~G~~p~~ 284 (588)
T 3ics_A 228 YEMAAYVHEHMKNHDVELVFEDGVDALEEN-GA---VVRLKS---------------GSVIQTDMLILAIGVQPES 284 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEGG-GT---EEEETT---------------SCEEECSEEEECSCEEECC
T ss_pred HHHHHHHHHHHHHcCCEEEECCeEEEEecC-CC---EEEECC---------------CCEEEcCEEEEccCCCCCh
Confidence 345677788899999999999999999653 23 466654 4689999999999987643
No 158
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=95.75 E-value=0.026 Score=43.52 Aligned_cols=63 Identities=17% Similarity=0.228 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
.+.+.+.+..++.|++|++++.+.++..++++.+ .|.+.+. .+++ ..++.+|.||+|.|....
T Consensus 228 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~---~~~~-------~~~~~~D~vi~a~G~~p~ 290 (483)
T 3dgh_A 228 QMAELVAASMEERGIPFLRKTVPLSVEKQDDGKL-LVKYKNV---ETGE-------ESEDVYDTVLWAIGRKGL 290 (483)
T ss_dssp HHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCE-EEEEEET---TTCC-------EEEEEESEEEECSCEEEC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcE-EEEEecC---CCCc-------eeEEEcCEEEECcccccC
Confidence 4566778888999999999999999987534444 4666541 1122 247999999999997654
No 159
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.69 E-value=0.035 Score=42.46 Aligned_cols=60 Identities=12% Similarity=0.179 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
.+.+.+.+..++.|+++++++.|+++..+ ++. +.|.+.+ +|+ +.++.+|.||+|+|....
T Consensus 212 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~-~~v~~~~-----~g~-------~~~~~~D~vv~a~G~~p~ 271 (455)
T 1ebd_A 212 QMAAIIKKRLKKKGVEVVTNALAKGAEER-EDG-VTVTYEA-----NGE-------TKTIDADYVLVTVGRRPN 271 (455)
T ss_dssp HHHHHHHHHHHHTTCEEEESEEEEEEEEE-TTE-EEEEEEE-----TTE-------EEEEEESEEEECSCEEES
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEe-CCe-EEEEEEe-----CCc-------eeEEEcCEEEECcCCCcc
Confidence 45667788889999999999999999864 333 3354431 111 367999999999998764
No 160
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=95.68 E-value=0.045 Score=41.99 Aligned_cols=60 Identities=18% Similarity=0.136 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
.+.+.+.+..++.|++|++++.++++..+ ++.+. |.+.+ .+| ..++.+|.||+|.|....
T Consensus 222 ~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~-~~~~~-v~~~~----~~g--------~~~~~~D~vi~a~G~~p~ 281 (476)
T 3lad_A 222 QVAKEAQKILTKQGLKILLGARVTGTEVK-NKQVT-VKFVD----AEG--------EKSQAFDKLIVAVGRRPV 281 (476)
T ss_dssp HHHHHHHHHHHHTTEEEEETCEEEEEEEC-SSCEE-EEEES----SSE--------EEEEEESEEEECSCEEEC
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEEc-CCEEE-EEEEe----CCC--------cEEEECCEEEEeeCCccc
Confidence 45667778889999999999999999875 44443 55543 111 157999999999997654
No 161
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=95.68 E-value=0.018 Score=43.19 Aligned_cols=54 Identities=17% Similarity=0.243 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 18 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 18 ~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
..+.+.+.+..++.||++++++.++++.- + +|.+.+ |.++.+|.||+|.|....
T Consensus 218 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~--~----~v~~~~---------------g~~~~~D~vi~a~G~~~~ 271 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKLVHNFKIKEIRE--H----EIVDEK---------------GNTIPADITILLPPYTGN 271 (409)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEECS--S----EEEETT---------------SCEEECSEEEEECCEECC
T ss_pred HHHHHHHHHHHHHCCCEEEcCCceEEECC--C----eEEECC---------------CCEEeeeEEEECCCCCcc
Confidence 45777888889999999999999999842 2 266654 568999999999997653
No 162
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=95.63 E-value=0.014 Score=43.86 Aligned_cols=42 Identities=14% Similarity=0.303 Sum_probs=33.4
Q ss_pred CEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 33 VEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 33 v~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
++|+++++|++|..+ ++.+ .|.+.+ |.++.|+.||+|...+.
T Consensus 248 ~~i~~~~~V~~i~~~-~~~~-~v~~~~---------------g~~~~ad~vi~a~p~~~ 289 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHS-GSCY-SLELDN---------------GVTLDADSVIVTAPHKA 289 (470)
T ss_dssp EEEECSCCEEEEEEC-SSSE-EEEESS---------------SCEEEESEEEECSCHHH
T ss_pred CEEEeCCceEEEEEc-CCeE-EEEECC---------------CCEEECCEEEECCCHHH
Confidence 799999999999986 4554 477754 45799999999987554
No 163
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=95.56 E-value=0.072 Score=41.13 Aligned_cols=63 Identities=21% Similarity=0.269 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
.+.+.+.+..++.|++|++++.+.++..+ ++. +.|.+.+. .+|+ ..++.+|.||+|.|.....
T Consensus 240 ~~~~~l~~~l~~~gV~v~~~~~v~~i~~~-~~~-~~v~~~~~---~~g~-------~~~i~~D~Vi~a~G~~p~~ 302 (491)
T 3urh_A 240 EVAKQLQRMLTKQGIDFKLGAKVTGAVKS-GDG-AKVTFEPV---KGGE-------ATTLDAEVVLIATGRKPST 302 (491)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEEE-TTE-EEEEEEET---TSCC-------CEEEEESEEEECCCCEECC
T ss_pred HHHHHHHHHHHhCCCEEEECCeEEEEEEe-CCE-EEEEEEec---CCCc-------eEEEEcCEEEEeeCCccCC
Confidence 45667788889999999999999999875 343 33555431 1122 2689999999999986543
No 164
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=95.54 E-value=0.021 Score=43.07 Aligned_cols=47 Identities=21% Similarity=0.359 Sum_probs=35.8
Q ss_pred HHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCC
Q psy9487 27 QAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 90 (101)
Q Consensus 27 ~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~ 90 (101)
-++++|++|+++++|++|..+ ++..+.|.+ + +.++.|+.||+|.+.+
T Consensus 221 l~~~lg~~i~~~~~V~~i~~~-~~~~v~v~~-~---------------~~~~~ad~VI~a~p~~ 267 (453)
T 2yg5_A 221 MAEALGDDVFLNAPVRTVKWN-ESGATVLAD-G---------------DIRVEASRVILAVPPN 267 (453)
T ss_dssp HHHHHGGGEECSCCEEEEEEE-TTEEEEEET-T---------------TEEEEEEEEEECSCGG
T ss_pred HHHhcCCcEEcCCceEEEEEe-CCceEEEEE-C---------------CeEEEcCEEEEcCCHH
Confidence 344568999999999999986 554233654 2 4689999999998876
No 165
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=95.52 E-value=0.06 Score=41.41 Aligned_cols=64 Identities=13% Similarity=0.084 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 18 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 18 ~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
..+.+.|.+..++.|+++++++.|+++..+ ++. +.|.+.+. .+|+. .++.+|.||+|+|..+..
T Consensus 210 ~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~-~~~-~~v~~~~~---~~g~~-------~~i~~D~vv~a~G~~p~~ 273 (464)
T 2eq6_A 210 PETAALLRRALEKEGIRVRTKTKAVGYEKK-KDG-LHVRLEPA---EGGEG-------EEVVVDKVLVAVGRKPRT 273 (464)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEE-TTE-EEEEEEET---TCCSC-------EEEEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHHhcCCEEEcCCEEEEEEEe-CCE-EEEEEeec---CCCce-------eEEEcCEEEECCCcccCC
Confidence 356677788889999999999999999874 443 33555320 11221 379999999999987654
No 166
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=95.52 E-value=0.067 Score=41.09 Aligned_cols=66 Identities=20% Similarity=0.084 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
.+.+.+.+..++.|++|++++.++++..++++..+.|.+.+.+ +|+. .|.++.+|.||+|.|....
T Consensus 229 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~---~g~~-----~g~~~~~D~vi~a~G~~p~ 294 (478)
T 3dk9_A 229 MISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPG---RLPV-----MTMIPDVDCLLWAIGRVPN 294 (478)
T ss_dssp HHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTT---SCCE-----EEEEEEESEEEECSCEEES
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCC---CCcc-----cceEEEcCEEEEeeccccC
Confidence 4556778888999999999999999987534423446665311 1110 0257999999999997654
No 167
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=95.49 E-value=0.057 Score=41.33 Aligned_cols=60 Identities=23% Similarity=0.284 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
.+.+++.+..++.|+++++++.++++.-+ ++.+ .|.+.+ +|+ ..++.+|.||+|.|....
T Consensus 213 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~~-~v~~~~-----~g~-------~~~~~~D~vv~a~G~~p~ 272 (464)
T 2a8x_A 213 DVSKEIEKQFKKLGVTILTATKVESIADG-GSQV-TVTVTK-----DGV-------AQELKAEKVLQAIGFAPN 272 (464)
T ss_dssp HHHHHHHHHHHHHTCEEECSCEEEEEEEC-SSCE-EEEEES-----SSC-------EEEEEESEEEECSCEEEC
T ss_pred HHHHHHHHHHHHcCCEEEeCcEEEEEEEc-CCeE-EEEEEc-----CCc-------eEEEEcCEEEECCCCCcc
Confidence 45567788888999999999999999864 3443 355431 121 257999999999998754
No 168
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=95.44 E-value=0.048 Score=38.54 Aligned_cols=57 Identities=21% Similarity=0.184 Sum_probs=42.0
Q ss_pred HHHHHHH-CCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 24 LGEQAEA-MGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 24 l~~~A~~-~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
+.+++.+ .||++++++.++++.- ++++.+|.+.+. .+|+. .++.+|.||+|.|....
T Consensus 195 ~~~~~~~~~gv~~~~~~~v~~i~~--~~~~~~v~~~~~---~~g~~-------~~~~~D~vv~a~G~~p~ 252 (323)
T 3f8d_A 195 YVETVKKKPNVEFVLNSVVKEIKG--DKVVKQVVVENL---KTGEI-------KELNVNGVFIEIGFDPP 252 (323)
T ss_dssp HHHHHHTCTTEEEECSEEEEEEEE--SSSEEEEEEEET---TTCCE-------EEEECSEEEECCCEECC
T ss_pred HHHHHHhCCCcEEEeCCEEEEEec--cCceeEEEEEEC---CCCce-------EEEEcCEEEEEECCCCC
Confidence 4555555 4999999999999976 367778887641 12321 47999999999997765
No 169
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=95.44 E-value=0.018 Score=44.50 Aligned_cols=60 Identities=15% Similarity=0.274 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHH-HCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCC
Q psy9487 18 GHVVKWLGEQAE-AMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 90 (101)
Q Consensus 18 ~~~d~~l~~~A~-~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~ 90 (101)
+....++...++ ..+..|++++.|.+++++ +++++||+....+ + ...+.|+.||+|+|+-
T Consensus 210 s~~~~~~~~~~~~r~nl~v~~~~~v~~i~~~-~~~a~gv~~~~~~----~--------~~~~~a~~VILsAGai 270 (526)
T 3t37_A 210 TAADAWLTKAVRGRKNLTILTGSRVRRLKLE-GNQVRSLEVVGRQ----G--------SAEVFADQIVLCAGAL 270 (526)
T ss_dssp CHHHHHSCHHHHTCTTEEEECSCEEEEEEEE-TTEEEEEEEEETT----E--------EEEEEEEEEEECSHHH
T ss_pred ccccccccccccCCCCeEEEeCCEEEEEEec-CCeEEEEEEEecC----c--------eEEEeecceEEccccc
Confidence 334444433333 467999999999999996 7899999987522 1 2578999999999953
No 170
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=95.42 E-value=0.076 Score=40.28 Aligned_cols=50 Identities=12% Similarity=-0.007 Sum_probs=36.3
Q ss_pred CCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 31 MGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 31 ~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
.|++|++++.|+++..+ ++. +.|.+.+. .+|+. .++.+|.||+|+|....
T Consensus 329 ~~v~i~~~~~v~~v~~~-~~~-~~v~~~~~---~~g~~-------~~~~~D~Vv~AtG~~p~ 378 (463)
T 3s5w_A 329 PRHAFRCMTTVERATAT-AQG-IELALRDA---GSGEL-------SVETYDAVILATGYERQ 378 (463)
T ss_dssp CCSEEETTEEEEEEEEE-TTE-EEEEEEET---TTCCE-------EEEEESEEEECCCEECC
T ss_pred CCeEEEeCCEEEEEEec-CCE-EEEEEEEc---CCCCe-------EEEECCEEEEeeCCCCC
Confidence 69999999999999875 333 44666531 13332 46999999999998754
No 171
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=95.36 E-value=0.013 Score=44.53 Aligned_cols=62 Identities=18% Similarity=0.199 Sum_probs=41.3
Q ss_pred EEEEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEe---ccccccCCCCCCcCCCCCeEEEccEEEEeecC
Q psy9487 13 YVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIAT---GDVGIAKDGSPKDTFARGMELHAKVTIFAEGC 89 (101)
Q Consensus 13 ~~v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~---~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~ 89 (101)
+..-+.-+.+....-++.+|++|+++++|++|..+ +++ +.|.+ .+ |.++.|+.||+|.+.
T Consensus 230 ~~~~~gG~~~l~~~l~~~lg~~i~~~~~V~~i~~~-~~~-~~v~~~~~~~---------------g~~~~ad~vV~a~~~ 292 (478)
T 2ivd_A 230 LSTFDGGLQVLIDALAASLGDAAHVGARVEGLARE-DGG-WRLIIEEHGR---------------RAELSVAQVVLAAPA 292 (478)
T ss_dssp EEEETTCTHHHHHHHHHHHGGGEESSEEEEEEECC---C-CEEEEEETTE---------------EEEEECSEEEECSCH
T ss_pred EEEECCCHHHHHHHHHHHhhhhEEcCCEEEEEEec-CCe-EEEEEeecCC---------------CceEEcCEEEECCCH
Confidence 33333334444333444558899999999999885 444 45766 33 467999999999987
Q ss_pred Cc
Q psy9487 90 HG 91 (101)
Q Consensus 90 ~s 91 (101)
+.
T Consensus 293 ~~ 294 (478)
T 2ivd_A 293 HA 294 (478)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 172
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=95.34 E-value=0.051 Score=39.05 Aligned_cols=60 Identities=17% Similarity=0.189 Sum_probs=43.0
Q ss_pred HHHHHHH-HHCCCEEecCCceeEEEEecCC--cEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 22 KWLGEQA-EAMGVEIYPGIPASEVLYHGDG--SVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 22 ~~l~~~A-~~~Gv~i~~gt~v~~i~~~~~g--~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
..+.+++ ++.|+++++++.+.++.-+ ++ ++.+|.+.+. .+|+ ..++.+|.||+|.|....
T Consensus 198 ~~~~~~~~~~~gv~i~~~~~v~~i~~~-~~~~~v~~v~~~~~---~~g~-------~~~i~~D~vi~a~G~~p~ 260 (333)
T 1vdc_A 198 KIMQQRALSNPKIDVIWNSSVVEAYGD-GERDVLGGLKVKNV---VTGD-------VSDLKVSGLFFAIGHEPA 260 (333)
T ss_dssp HHHHHHHHTCTTEEEECSEEEEEEEES-SSSSSEEEEEEEET---TTCC-------EEEEECSEEEECSCEEES
T ss_pred HHHHHHHHhCCCeeEecCCceEEEeCC-CCccceeeEEEEec---CCCc-------eEEEecCEEEEEeCCccc
Confidence 3444444 5789999999999999874 43 7777877531 1222 267999999999997654
No 173
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=95.33 E-value=0.043 Score=41.68 Aligned_cols=62 Identities=15% Similarity=0.136 Sum_probs=41.4
Q ss_pred cEEEEhHHHHHHHHHHHHHCC-CEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCC
Q psy9487 12 NYVVRLGHVVKWLGEQAEAMG-VEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 90 (101)
Q Consensus 12 ~~~v~r~~~d~~l~~~A~~~G-v~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~ 90 (101)
.+..-+.-+.+....-++.++ ++|+++++|++|..+ ++.+ .|.+.+ | ++.|+.||+|.+++
T Consensus 227 ~~~~~~~G~~~l~~~l~~~l~~~~i~~~~~V~~i~~~-~~~~-~v~~~~---------------g-~~~ad~vV~a~p~~ 288 (475)
T 3lov_A 227 QFLSLETGLESLIERLEEVLERSEIRLETPLLAISRE-DGRY-RLKTDH---------------G-PEYADYVLLTIPHP 288 (475)
T ss_dssp SEEEETTCHHHHHHHHHHHCSSCEEESSCCCCEEEEE-TTEE-EEECTT---------------C-CEEESEEEECSCHH
T ss_pred cEEeeCChHHHHHHHHHhhccCCEEEcCCeeeEEEEe-CCEE-EEEECC---------------C-eEECCEEEECCCHH
Confidence 344444434444333344444 799999999999986 4554 377654 4 69999999998765
Q ss_pred c
Q psy9487 91 G 91 (101)
Q Consensus 91 s 91 (101)
.
T Consensus 289 ~ 289 (475)
T 3lov_A 289 Q 289 (475)
T ss_dssp H
T ss_pred H
Confidence 3
No 174
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=95.32 E-value=0.029 Score=41.95 Aligned_cols=53 Identities=13% Similarity=0.141 Sum_probs=39.3
Q ss_pred HHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 21 VKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 21 d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
.+.....++..+.+|+++++|++|..+ ++++. |.+.+ | ++.||.||+|.+++.
T Consensus 206 ~~l~~~l~~~l~~~v~~~~~V~~i~~~-~~~v~-v~~~~---------------g-~~~ad~Vv~a~~~~~ 258 (424)
T 2b9w_A 206 QAMFEHLNATLEHPAERNVDITRITRE-DGKVH-IHTTD---------------W-DRESDVLVLTVPLEK 258 (424)
T ss_dssp HHHHHHHHHHSSSCCBCSCCEEEEECC-TTCEE-EEESS---------------C-EEEESEEEECSCHHH
T ss_pred HHHHHHHHHhhcceEEcCCEEEEEEEE-CCEEE-EEECC---------------C-eEEcCEEEECCCHHH
Confidence 333344456677899999999999885 56665 77654 3 489999999998764
No 175
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=95.32 E-value=0.049 Score=38.73 Aligned_cols=60 Identities=13% Similarity=0.052 Sum_probs=43.0
Q ss_pred HHHHHHHH-HCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 22 KWLGEQAE-AMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 22 ~~l~~~A~-~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
..+.+++. +.|+++++++.++++..+ ++++.+|.+.+. .+|+ ..++.+|.||+|.|....
T Consensus 182 ~~~~~~l~~~~gv~v~~~~~v~~i~~~-~~~v~~v~~~~~---~~g~-------~~~i~~D~vi~a~G~~p~ 242 (311)
T 2q0l_A 182 PITLEHAKNNDKIEFLTPYVVEEIKGD-ASGVSSLSIKNT---ATNE-------KRELVVPGFFIFVGYDVN 242 (311)
T ss_dssp HHHHHHHHTCTTEEEETTEEEEEEEEE-TTEEEEEEEEET---TTCC-------EEEEECSEEEECSCEEEC
T ss_pred HHHHHHHhhCCCeEEEeCCEEEEEECC-CCcEeEEEEEec---CCCc-------eEEEecCEEEEEecCccC
Confidence 34556665 479999999999999874 467777877531 1222 147999999999997654
No 176
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.31 E-value=0.037 Score=42.31 Aligned_cols=62 Identities=13% Similarity=0.125 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
.+.+.|.+..++.|++|++++.|.++..+ ++. +.|.+.+ ..+|+ +.++.+|.||+|.|....
T Consensus 219 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~-~~v~~~~---~~~g~-------~~~~~~D~vv~a~G~~p~ 280 (470)
T 1dxl_A 219 EIRKQFQRSLEKQGMKFKLKTKVVGVDTS-GDG-VKLTVEP---SAGGE-------QTIIEADVVLVSAGRTPF 280 (470)
T ss_dssp HHHHHHHHHHHHSSCCEECSEEEEEEECS-SSS-EEEEEEE---SSSCC-------CEEEEESEEECCCCEEEC
T ss_pred HHHHHHHHHHHHcCCEEEeCCEEEEEEEc-CCe-EEEEEEe---cCCCc-------ceEEECCEEEECCCCCcC
Confidence 45667788889999999999999999764 333 3355432 01222 268999999999998764
No 177
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=95.23 E-value=0.058 Score=38.78 Aligned_cols=59 Identities=20% Similarity=0.132 Sum_probs=43.0
Q ss_pred HHHHHHHHH-CCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 22 KWLGEQAEA-MGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 22 ~~l~~~A~~-~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
..+.+++.+ .|++|++++.++++.. ++++.+|.+.+. .+|+ ..++.+|.||+|.|....
T Consensus 191 ~~~~~~l~~~~gv~i~~~~~v~~i~~--~~~v~~v~~~~~---~~g~-------~~~i~~D~vi~a~G~~p~ 250 (325)
T 2q7v_A 191 KVAQARAFANPKMKFIWDTAVEEIQG--ADSVSGVKLRNL---KTGE-------VSELATDGVFIFIGHVPN 250 (325)
T ss_dssp HHHHHHHHTCTTEEEECSEEEEEEEE--SSSEEEEEEEET---TTCC-------EEEEECSEEEECSCEEES
T ss_pred hHHHHHHHhcCCceEecCCceEEEcc--CCcEEEEEEEEC---CCCc-------EEEEEcCEEEEccCCCCC
Confidence 445666655 6999999999999976 467778887631 1232 147999999999997654
No 178
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=95.13 E-value=0.047 Score=42.93 Aligned_cols=61 Identities=11% Similarity=0.131 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 18 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 18 ~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
..+-+++.+..++.||+|++++.|+++. +++.+..+...+ |+. .+.+|.++.||.|+|...
T Consensus 272 ~~~~~~~~~~L~~~GV~v~~~~~v~~v~--~~~~~~~~~~~d------g~~-----~~~~i~ad~viwa~Gv~~ 332 (502)
T 4g6h_A 272 KKLSSYAQSHLENTSIKVHLRTAVAKVE--EKQLLAKTKHED------GKI-----TEETIPYGTLIWATGNKA 332 (502)
T ss_dssp HHHHHHHHHHHHHTTCEEETTEEEEEEC--SSEEEEEEECTT------SCE-----EEEEEECSEEEECCCEEC
T ss_pred HHHHHHHHHHHHhcceeeecCceEEEEe--CCceEEEEEecC------ccc-----ceeeeccCEEEEccCCcC
Confidence 3455667788889999999999999984 233333333322 221 025799999999999754
No 179
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=95.08 E-value=0.046 Score=38.93 Aligned_cols=56 Identities=16% Similarity=0.145 Sum_probs=41.7
Q ss_pred HHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 25 GEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 25 ~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
.+++++.|+++++++.+.++.-+ +.+.+|.+.+. .+++ +.++.+|.||+|.|....
T Consensus 196 ~~~l~~~gv~~~~~~~v~~i~~~--~~~~~v~~~~~---~~g~-------~~~~~~D~vv~a~G~~p~ 251 (332)
T 3lzw_A 196 VENLHASKVNVLTPFVPAELIGE--DKIEQLVLEEV---KGDR-------KEILEIDDLIVNYGFVSS 251 (332)
T ss_dssp HHHHHHSSCEEETTEEEEEEECS--SSCCEEEEEET---TSCC-------EEEEECSEEEECCCEECC
T ss_pred HHHHhcCCeEEEeCceeeEEecC--CceEEEEEEec---CCCc-------eEEEECCEEEEeeccCCC
Confidence 45678899999999999999753 33666777641 1222 368999999999997653
No 180
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.90 E-value=0.036 Score=41.54 Aligned_cols=53 Identities=23% Similarity=0.359 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
.+.+++.+..++.|+++++++.++++. .. +|.+.+ |. +.+|.||+|.|.....
T Consensus 184 ~~~~~l~~~l~~~gV~i~~~~~v~~i~---~~---~v~~~~---------------g~-i~~D~vi~a~G~~p~~ 236 (367)
T 1xhc_A 184 ELSNMIKDMLEETGVKFFLNSELLEAN---EE---GVLTNS---------------GF-IEGKVKICAIGIVPNV 236 (367)
T ss_dssp HHHHHHHHHHHHTTEEEECSCCEEEEC---SS---EEEETT---------------EE-EECSCEEEECCEEECC
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEE---ee---EEEECC---------------CE-EEcCEEEECcCCCcCH
Confidence 566778888999999999999999985 12 466654 45 9999999999987653
No 181
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=94.87 E-value=0.014 Score=47.44 Aligned_cols=56 Identities=13% Similarity=0.052 Sum_probs=39.9
Q ss_pred HHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 21 VKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 21 d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
...|.+.+++.||+|+++++|+++.- ++ ..++... +++ +.++.+|.||+|.|....
T Consensus 570 ~~~l~~~l~~~GV~i~~~~~V~~i~~--~~--~~v~~~~-----~~~-------~~~i~aD~VV~A~G~~p~ 625 (690)
T 3k30_A 570 VNRIQRRLIENGVARVTDHAVVAVGA--GG--VTVRDTY-----ASI-------ERELECDAVVMVTARLPR 625 (690)
T ss_dssp HHHHHHHHHHTTCEEEESEEEEEEET--TE--EEEEETT-----TCC-------EEEEECSEEEEESCEEEC
T ss_pred HHHHHHHHHHCCCEEEcCcEEEEEEC--Ce--EEEEEcc-----CCe-------EEEEECCEEEECCCCCCC
Confidence 45677888999999999999999863 22 2233221 111 468999999999998654
No 182
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=94.78 E-value=0.097 Score=40.44 Aligned_cols=64 Identities=14% Similarity=0.138 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
.+.+.+.+..++.|+++++++.+.++...+++.+ .|...+. .+|+ ..++.+|.||+|.|.....
T Consensus 226 ~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~-~v~~~~~---~~g~-------~~~~~~D~vi~a~G~~p~~ 289 (488)
T 3dgz_A 226 QMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQL-QVTWEDH---ASGK-------EDTGTFDTVLWAIGRVPET 289 (488)
T ss_dssp HHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCE-EEEEEET---TTTE-------EEEEEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcE-EEEEEeC---CCCe-------eEEEECCEEEEcccCCccc
Confidence 4567778888999999999999999976433433 3555431 1121 1358999999999976543
No 183
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=94.76 E-value=0.065 Score=41.60 Aligned_cols=66 Identities=17% Similarity=0.150 Sum_probs=45.4
Q ss_pred HHHHHHHHHHH--------------CCCEEecCCceeEEEEecCC-cEEEEEecccccc---------CCCCCCcCCCCC
Q psy9487 20 VVKWLGEQAEA--------------MGVEIYPGIPASEVLYHGDG-SVKGIATGDVGIA---------KDGSPKDTFARG 75 (101)
Q Consensus 20 ~d~~l~~~A~~--------------~Gv~i~~gt~v~~i~~~~~g-~v~GV~~~~~g~~---------~~g~~~~~~~~g 75 (101)
+.+.|.+.+++ .|++|++++.+.+|.-++++ ++.+|++.+.... .+|+ .
T Consensus 245 ~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~-------~ 317 (460)
T 1cjc_A 245 LMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGD-------V 317 (460)
T ss_dssp HHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEE-------E
T ss_pred HHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCc-------e
Confidence 44556666666 89999999999999764236 8888876531100 0111 2
Q ss_pred eEEEccEEEEeecCCch
Q psy9487 76 MELHAKVTIFAEGCHGH 92 (101)
Q Consensus 76 ~~i~A~~VI~A~G~~s~ 92 (101)
.++.++.||.|.|..+.
T Consensus 318 ~~i~~d~Vi~a~G~~p~ 334 (460)
T 1cjc_A 318 EDLPCGLVLSSIGYKSR 334 (460)
T ss_dssp EEEECSEEEECCCEECC
T ss_pred EEEEcCEEEECCCCCCC
Confidence 58999999999998764
No 184
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=94.73 E-value=0.069 Score=41.94 Aligned_cols=59 Identities=17% Similarity=0.147 Sum_probs=44.6
Q ss_pred HHHHHHHHH-CCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 22 KWLGEQAEA-MGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 22 ~~l~~~A~~-~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
..+.++.++ .|+++++++.++++.-+ ++++.+|.+.+. .+|+. .++.++.||+|.|...
T Consensus 394 ~~l~~~l~~~~gV~v~~~~~v~~i~~~-~~~v~~v~~~~~---~~g~~-------~~i~~D~vi~a~G~~p 453 (521)
T 1hyu_A 394 QVLQDKVRSLKNVDIILNAQTTEVKGD-GSKVVGLEYRDR---VSGDI-------HSVALAGIFVQIGLLP 453 (521)
T ss_dssp HHHHHHHTTCTTEEEECSEEEEEEEEC-SSSEEEEEEEET---TTCCE-------EEEECSEEEECCCEEE
T ss_pred HHHHHHHhcCCCcEEEeCCEEEEEEcC-CCcEEEEEEEeC---CCCce-------EEEEcCEEEECcCCCC
Confidence 456677777 59999999999999864 678888888641 12321 4799999999999654
No 185
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=94.57 E-value=0.041 Score=38.57 Aligned_cols=51 Identities=12% Similarity=-0.029 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 20 VVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 20 ~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
+...+.+..++.|++++. ++++++.- ++ +|.+.+ |.++.+|.||+|.|...
T Consensus 176 ~~~~~~~~l~~~gv~i~~-~~v~~i~~--~~---~v~~~~---------------g~~~~~D~vi~a~G~~p 226 (297)
T 3fbs_A 176 PDADQHALLAARGVRVET-TRIREIAG--HA---DVVLAD---------------GRSIALAGLFTQPKLRI 226 (297)
T ss_dssp CCHHHHHHHHHTTCEEEC-SCEEEEET--TE---EEEETT---------------SCEEEESEEEECCEEEC
T ss_pred CCHHHHHHHHHCCcEEEc-ceeeeeec--CC---eEEeCC---------------CCEEEEEEEEEccCccc
Confidence 566778888999999996 88888853 22 566654 56899999999999764
No 186
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=94.53 E-value=0.069 Score=41.20 Aligned_cols=62 Identities=13% Similarity=-0.023 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
.+.+.+.+..++.|++|++++.|.++..+ ++ ...|.+.+. +++ |.++.+|.||+|.|.....
T Consensus 227 ~~~~~l~~~l~~~gV~i~~~~~v~~i~~~-~~-~~~v~~~~~----~~~-------g~~~~~D~vv~a~G~~p~~ 288 (482)
T 1ojt_A 227 DLVKVWQKQNEYRFDNIMVNTKTVAVEPK-ED-GVYVTFEGA----NAP-------KEPQRYDAVLVAAGRAPNG 288 (482)
T ss_dssp HHHHHHHHHHGGGEEEEECSCEEEEEEEE-TT-EEEEEEESS----SCC-------SSCEEESCEEECCCEEECG
T ss_pred HHHHHHHHHHHhcCCEEEECCEEEEEEEc-CC-eEEEEEecc----CCC-------ceEEEcCEEEECcCCCcCC
Confidence 45567788888999999999999999864 33 344665421 010 2468899999999987653
No 187
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=94.28 E-value=0.079 Score=40.09 Aligned_cols=49 Identities=12% Similarity=0.110 Sum_probs=37.6
Q ss_pred HHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 24 LGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 24 l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
+.+..++.|++++++++|+++..+ +. .|.+.+ |.++.+|.+|+|+|+..
T Consensus 68 ~~~~~~~~~i~~~~~~~V~~id~~-~~---~v~~~~---------------g~~~~yd~lvlAtG~~p 116 (385)
T 3klj_A 68 KNDWYEKNNIKVITSEFATSIDPN-NK---LVTLKS---------------GEKIKYEKLIIASGSIA 116 (385)
T ss_dssp CHHHHHHTTCEEECSCCEEEEETT-TT---EEEETT---------------SCEEECSEEEECCCEEE
T ss_pred CHHHHHHCCCEEEeCCEEEEEECC-CC---EEEECC---------------CCEEECCEEEEecCCCc
Confidence 345567889999999999999764 33 245544 46899999999999754
No 188
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=94.21 E-value=0.17 Score=40.43 Aligned_cols=57 Identities=18% Similarity=0.191 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 20 VVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 20 ~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
+.+.+.+..++.|+++++++.+..+..+ ++.+. |.+.+ +.++.+|.|++|.|.....
T Consensus 265 i~~~l~~~l~~~gi~~~~~~~v~~~~~~-~~~~~-v~~~~---------------~~~~~~D~vLvAvGR~Pnt 321 (542)
T 4b1b_A 265 CAVKVKLYMEEQGVMFKNGILPKKLTKM-DDKIL-VEFSD---------------KTSELYDTVLYAIGRKGDI 321 (542)
T ss_dssp HHHHHHHHHHHTTCEEEETCCEEEEEEE-TTEEE-EEETT---------------SCEEEESEEEECSCEEESC
T ss_pred HHHHHHHHHHhhcceeecceEEEEEEec-CCeEE-EEEcC---------------CCeEEEEEEEEcccccCCc
Confidence 4556788889999999999999999875 44433 66654 3578899999999976543
No 189
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=94.17 E-value=0.21 Score=38.80 Aligned_cols=60 Identities=10% Similarity=0.099 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
.+.+.+.+..++. ++|++++.++++..+ ++.+. |...+ .+|+. .++.+|.||+|.|....
T Consensus 216 ~~~~~l~~~l~~~-V~i~~~~~v~~i~~~-~~~v~-v~~~~----~~G~~-------~~i~~D~Vi~a~G~~p~ 275 (492)
T 3ic9_A 216 EMKRYAEKTFNEE-FYFDAKARVISTIEK-EDAVE-VIYFD----KSGQK-------TTESFQYVLAATGRKAN 275 (492)
T ss_dssp HHHHHHHHHHHTT-SEEETTCEEEEEEEC-SSSEE-EEEEC----TTCCE-------EEEEESEEEECSCCEES
T ss_pred HHHHHHHHHHhhC-cEEEECCEEEEEEEc-CCEEE-EEEEe----CCCce-------EEEECCEEEEeeCCccC
Confidence 4555666666776 999999999999875 45554 55532 12221 57999999999998654
No 190
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=94.16 E-value=0.12 Score=36.96 Aligned_cols=61 Identities=13% Similarity=0.034 Sum_probs=39.4
Q ss_pred EhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 16 RLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 16 ~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
.-..+.+.+.+++++.+...+....+..+...+++. ..|.+.+ +.++.++.+|+|+|+...
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~---------------g~~~~a~~liiATGs~p~ 118 (304)
T 4fk1_A 58 KPEEFKEIGLNEVMKYPSVHYYEKTVVMITKQSTGL-FEIVTKD---------------HTKYLAERVLLATGMQEE 118 (304)
T ss_dssp CHHHHHHHHHHHHTTSTTEEEEECCEEEEEECTTSC-EEEEETT---------------CCEEEEEEEEECCCCEEE
T ss_pred CHHHHHHHHHHHHHhcCCEEEEeeEEEEeeecCCCc-EEEEECC---------------CCEEEeCEEEEccCCccc
Confidence 345555666777777765555555666665533333 3466654 568999999999998643
No 191
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.05 E-value=0.096 Score=40.21 Aligned_cols=58 Identities=17% Similarity=0.227 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
.+.+.+.+..++.|+++++++.|+++.. +. +.+... +|+ ..++.+|.||+|+|.....
T Consensus 213 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~---~~-v~v~~~------~G~-------~~~i~~D~vv~a~G~~p~~ 270 (458)
T 1lvl_A 213 ELTAPVAESLKKLGIALHLGHSVEGYEN---GC-LLANDG------KGG-------QLRLEADRVLVAVGRRPRT 270 (458)
T ss_dssp HHHHHHHHHHHHHTCEEETTCEEEEEET---TE-EEEECS------SSC-------CCEECCSCEEECCCEEECC
T ss_pred HHHHHHHHHHHHCCCEEEECCEEEEEEe---CC-EEEEEC------CCc-------eEEEECCEEEECcCCCcCC
Confidence 4567778888999999999999999853 33 334321 221 1579999999999987643
No 192
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=93.84 E-value=0.11 Score=44.28 Aligned_cols=65 Identities=20% Similarity=0.159 Sum_probs=44.2
Q ss_pred HHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCC-CCeEEEccEEEEeecCCc
Q psy9487 25 GEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFA-RGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 25 ~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~-~g~~i~A~~VI~A~G~~s 91 (101)
.+.+++.|++|++++.+.++..+ ++++.+|++.+...+.+|.... .. ...++.||.||+|.|...
T Consensus 377 ~~~~~~~Gv~~~~~~~~~~i~~~-~g~v~~v~~~~~~~~~~g~~~~-~~g~~~~i~aD~Vi~A~G~~~ 442 (1025)
T 1gte_A 377 VELAKEEKCEFLPFLSPRKVIVK-GGRIVAVQFVRTEQDETGKWNE-DEDQIVHLKADVVISAFGSVL 442 (1025)
T ss_dssp HHHHHHTTCEEECSEEEEEEEEE-TTEEEEEEEEEEEECTTSCEEE-EEEEEEEEECSEEEECSCEEC
T ss_pred HHHHHHcCCEEEeCCCceEEEcc-CCeEEEEEEEEeEEcCCCCccc-CCCceEEEECCEEEECCCCCC
Confidence 46788899999999999999874 7889888775321111221000 00 014799999999999854
No 193
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=93.79 E-value=0.038 Score=42.11 Aligned_cols=52 Identities=10% Similarity=0.019 Sum_probs=41.0
Q ss_pred hHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEee
Q psy9487 17 LGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAE 87 (101)
Q Consensus 17 r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~ 87 (101)
-..+-+.|++.+++.|++|.++++|++|..+ +++ |.+.+ |.++.|+.||.+.
T Consensus 221 ~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~-~~~---v~~~~---------------G~~~~ad~vI~t~ 272 (513)
T 4gde_A 221 TGGIWIAVANTLPKEKTRFGEKGKVTKVNAN-NKT---VTLQD---------------GTTIGYKKLVSTM 272 (513)
T ss_dssp HHHHHHHHHHTSCGGGEEESGGGCEEEEETT-TTE---EEETT---------------SCEEEEEEEEECS
T ss_pred HHHHHHHHHHHHHhcCeeeecceEEEEEEcc-CCE---EEEcC---------------CCEEECCEEEECC
Confidence 3567777888888999999999999999874 544 34544 5789999999874
No 194
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=93.78 E-value=0.14 Score=39.18 Aligned_cols=56 Identities=14% Similarity=0.054 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 20 VVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 20 ~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
+.+.+.+.+++.|++++.++.+. .+ ++. +.|.+.+ |+ ..++.++.+|+|+|+.+..
T Consensus 93 l~~~l~~~~~~~gv~~~~g~~~~---id-~~~-v~V~~~~------G~-------~~~~~~d~lViAtG~~~~~ 148 (464)
T 2a8x_A 93 RVAGVHFLMKKNKITEIHGYGTF---AD-ANT-LLVDLND------GG-------TESVTFDNAIIATGSSTRL 148 (464)
T ss_dssp HHHHHHHHHHHTTCEEECEEEEE---SS-SSE-EEEEETT------SC-------CEEEEEEEEEECCCEEECC
T ss_pred HHHHHHHHHHhCCCEEEEeEEEE---ec-CCe-EEEEeCC------Cc-------eEEEEcCEEEECCCCCCCC
Confidence 33445677788999999987643 33 333 3355433 11 0579999999999997654
No 195
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=93.76 E-value=0.13 Score=39.18 Aligned_cols=54 Identities=15% Similarity=0.087 Sum_probs=35.4
Q ss_pred HHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 22 KWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 22 ~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
+.+.+.+++.|++++.++.+. .+ .+. +.|.+.+ |+ ..+++++.+|+|+|+++..
T Consensus 100 ~~~~~~~~~~gv~~~~g~~~~---~~-~~~-~~v~~~~------G~-------~~~i~~d~lIiAtGs~p~~ 153 (470)
T 1dxl_A 100 RGIEGLFKKNKVTYVKGYGKF---VS-PSE-ISVDTIE------GE-------NTVVKGKHIIIATGSDVKS 153 (470)
T ss_dssp HHHHHHHHHHTCEEEESCEEE---EE-TTE-EEECCSS------SC-------CEEEECSEEEECCCEEECC
T ss_pred HHHHHHHHhCCCEEEEeEEEE---ec-CCE-EEEEeCC------Cc-------eEEEEcCEEEECCCCCCCC
Confidence 334566777899999998653 33 332 2344322 11 1579999999999987654
No 196
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=93.72 E-value=0.23 Score=36.02 Aligned_cols=55 Identities=18% Similarity=0.327 Sum_probs=39.2
Q ss_pred HHHHHHHHHCC-CEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEE-ccEEEEeecCCchh
Q psy9487 22 KWLGEQAEAMG-VEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELH-AKVTIFAEGCHGHL 93 (101)
Q Consensus 22 ~~l~~~A~~~G-v~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~-A~~VI~A~G~~s~l 93 (101)
+++.+..++.| +++++++.+.++..+ ++. ..|.+.+ |.++. +|.||.|+|.....
T Consensus 218 ~~l~~~l~~~g~v~~~~~~~v~~i~~~-~~~-~~v~~~~---------------g~~~~~~d~vi~a~G~~~~~ 274 (369)
T 3d1c_A 218 QRLGNVIKQGARIEMNVHYTVKDIDFN-NGQ-YHISFDS---------------GQSVHTPHEPILATGFDATK 274 (369)
T ss_dssp HHHHHHHHTTCCEEEECSCCEEEEEEE-TTE-EEEEESS---------------SCCEEESSCCEECCCBCGGG
T ss_pred HHHHHHHhhCCcEEEecCcEEEEEEec-CCc-eEEEecC---------------CeEeccCCceEEeeccCCcc
Confidence 56666667787 999999999999764 333 3466543 33454 59999999987654
No 197
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=93.72 E-value=0.15 Score=39.46 Aligned_cols=54 Identities=9% Similarity=-0.014 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHCC-CEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecC
Q psy9487 20 VVKWLGEQAEAMG-VEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGC 89 (101)
Q Consensus 20 ~d~~l~~~A~~~G-v~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~ 89 (101)
+.+.+..-++.+. .+|+++++|++|..+ ++..+.|++.+ |.++.||.||+|...
T Consensus 201 ~~~l~~~l~~~l~~~~i~~~~~V~~I~~~-~~~~v~v~~~~---------------g~~~~ad~VI~t~p~ 255 (516)
T 1rsg_A 201 YDSVVQRIAQSFPQNWLKLSCEVKSITRE-PSKNVTVNCED---------------GTVYNADYVIITVPQ 255 (516)
T ss_dssp HHHHHHHHHTTSCGGGEETTCCEEEEEEC-TTSCEEEEETT---------------SCEEEEEEEEECCCH
T ss_pred HHHHHHHHHHhCCCCEEEECCEEEEEEEc-CCCeEEEEECC---------------CcEEECCEEEECCCH
Confidence 4444333444443 679999999999984 34445677765 467999999999864
No 198
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=93.69 E-value=0.2 Score=38.14 Aligned_cols=49 Identities=18% Similarity=0.173 Sum_probs=34.7
Q ss_pred HHHCC-CEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCC
Q psy9487 28 AEAMG-VEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 90 (101)
Q Consensus 28 A~~~G-v~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~ 90 (101)
++.++ .+|+++++|++|..+ ++++. |.+.+. ++ ...+.||.||+|...+
T Consensus 246 ~~~l~~~~i~~~~~V~~i~~~-~~~v~-v~~~~g-----~~-------~~~~~ad~vI~a~p~~ 295 (489)
T 2jae_A 246 QDRIGTDNIVFGAEVTSMKNV-SEGVT-VEYTAG-----GS-------KKSITADYAICTIPPH 295 (489)
T ss_dssp HHHHCGGGEETTCEEEEEEEE-TTEEE-EEEEET-----TE-------EEEEEESEEEECSCHH
T ss_pred HHhcCCCeEEECCEEEEEEEc-CCeEE-EEEecC-----Ce-------EEEEECCEEEECCCHH
Confidence 34445 889999999999986 55554 665440 00 1579999999998654
No 199
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=93.67 E-value=0.07 Score=40.73 Aligned_cols=48 Identities=15% Similarity=0.246 Sum_probs=36.7
Q ss_pred HHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 26 EQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 26 ~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
+.+++.|++++.+++|+.+..+ + + .|.+.+ |.++.++.+|+|+|+...
T Consensus 68 ~~~~~~gv~~~~~~~v~~i~~~-~-~--~v~~~~---------------g~~~~~d~lviAtG~~p~ 115 (431)
T 1q1r_A 68 DAYAAQNIQLLGGTQVTAINRD-R-Q--QVILSD---------------GRALDYDRLVLATGGRPR 115 (431)
T ss_dssp HHHHHTTEEEECSCCEEEEETT-T-T--EEEETT---------------SCEEECSEEEECCCEEEC
T ss_pred HHHHhCCCEEEeCCEEEEEECC-C-C--EEEECC---------------CCEEECCEEEEcCCCCcc
Confidence 4556789999999999998753 3 3 345543 457999999999998764
No 200
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=93.53 E-value=0.14 Score=42.73 Aligned_cols=42 Identities=24% Similarity=0.339 Sum_probs=33.6
Q ss_pred HCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeec
Q psy9487 30 AMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEG 88 (101)
Q Consensus 30 ~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G 88 (101)
..|++|+++++|++|..+ ++.|. |.+.+ |.++.|+.||+|..
T Consensus 541 a~gl~I~l~t~V~~I~~~-~~~v~-V~~~~---------------G~~i~Ad~VIvA~P 582 (776)
T 4gut_A 541 AEGLDIQLKSPVQCIDYS-GDEVQ-VTTTD---------------GTGYSAQKVLVTVP 582 (776)
T ss_dssp HTTSCEESSCCEEEEECS-SSSEE-EEETT---------------CCEEEESEEEECCC
T ss_pred HhCCcEEcCCeeEEEEEc-CCEEE-EEECC---------------CcEEEcCEEEECCC
Confidence 358999999999999985 55544 67654 46799999999974
No 201
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=93.52 E-value=0.16 Score=35.69 Aligned_cols=59 Identities=17% Similarity=0.094 Sum_probs=43.9
Q ss_pred EEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecC-CcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 15 VRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGD-GSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 15 v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~-g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
+....+..++.+.+++.|++++.+ +|.++ .+++ +.+. |.+.. .+ ++.++.+|+|+|+..
T Consensus 59 ~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i-~~~~~~~~~-v~~~~--------------~~-~~~~d~lvlAtG~~~ 118 (315)
T 3r9u_A 59 MDGISFMAPWSEQCMRFGLKHEMV-GVEQI-LKNSDGSFT-IKLEG--------------GK-TELAKAVIVCTGSAP 118 (315)
T ss_dssp BCHHHHHHHHHHHHTTTCCEEECC-CEEEE-EECTTSCEE-EEETT--------------SC-EEEEEEEEECCCEEE
T ss_pred CCHHHHHHHHHHHHHHcCcEEEEE-EEEEE-ecCCCCcEE-EEEec--------------CC-EEEeCEEEEeeCCCC
Confidence 466788899999999999999998 88888 7521 3332 32322 03 799999999999754
No 202
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=93.22 E-value=0.22 Score=37.92 Aligned_cols=53 Identities=19% Similarity=0.120 Sum_probs=36.4
Q ss_pred HHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCC-eEEEccEEEEeecCCchh
Q psy9487 21 VKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARG-MELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 21 d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g-~~i~A~~VI~A~G~~s~l 93 (101)
.+.+.+.+++.|++++.++.+. .+ .+. +.|.+.+ | .++.++.+|+|+|+....
T Consensus 94 ~~~~~~~~~~~gv~~~~g~~~~---id-~~~-v~V~~~~---------------G~~~i~~d~lViATGs~p~~ 147 (455)
T 1ebd_A 94 TGGVEGLLKGNKVEIVKGEAYF---VD-ANT-VRVVNGD---------------SAQTYTFKNAIIATGSRPIE 147 (455)
T ss_dssp HHHHHHHHHTTTCEEEESEEEE---EE-TTE-EEEEETT---------------EEEEEECSEEEECCCEEECC
T ss_pred HHHHHHHHHhCCCEEEEEEEEE---cc-CCe-EEEEeCC---------------CcEEEEeCEEEEecCCCCCC
Confidence 3445667788999999998653 33 333 3355543 3 579999999999986543
No 203
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=93.09 E-value=0.18 Score=38.83 Aligned_cols=57 Identities=19% Similarity=0.132 Sum_probs=34.9
Q ss_pred HHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccc-----cCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 24 LGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGI-----AKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 24 l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~-----~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
+.+.+++.|++++.++.+. .+ ++. +.|.+.+ +. ..+|+ ..+++++.+|+|+|+++..
T Consensus 101 ~~~~~~~~gv~~~~g~~~~---~~-~~~-v~v~~~~-g~~~~~~~~~g~-------~~~i~ad~lViAtGs~p~~ 162 (482)
T 1ojt_A 101 LAGMAKSRKVDVIQGDGQF---LD-PHH-LEVSLTA-GDAYEQAAPTGE-------KKIVAFKNCIIAAGSRVTK 162 (482)
T ss_dssp HHHHHHHTTCEEEEEEEEE---EE-TTE-EEEEEEE-EEETTEEEEEEE-------EEEEEEEEEEECCCEEECC
T ss_pred HHHHHHhCCcEEEeeEEEE---cc-CCE-EEEEecC-CcccccccccCc-------ceEEEcCEEEECCCCCCCC
Confidence 4566778999999988654 33 333 3344332 00 00011 1479999999999998654
No 204
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=93.05 E-value=0.14 Score=39.16 Aligned_cols=51 Identities=22% Similarity=0.161 Sum_probs=34.1
Q ss_pred HHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeE------EEccEEEEeecCCch
Q psy9487 24 LGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGME------LHAKVTIFAEGCHGH 92 (101)
Q Consensus 24 l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~------i~A~~VI~A~G~~s~ 92 (101)
+.+.+++.|++++.++.+.. + .+ .+.|.+.+ |+. .+ +.++.+|+|+|++++
T Consensus 102 ~~~~~~~~gv~~~~g~~~~~---~-~~-~v~V~~~~------G~~-------~~~~~~~~i~~d~lViAtGs~p~ 158 (478)
T 1v59_A 102 IELLFKKNKVTYYKGNGSFE---D-ET-KIRVTPVD------GLE-------GTVKEDHILDVKNIIVATGSEVT 158 (478)
T ss_dssp HHHHHHHTTCEEEESEEEES---S-SS-EEEEECCT------TCT-------TCCSSCEEEEEEEEEECCCEEEC
T ss_pred HHHHHHhCCCEEEEEEEEEc---c-CC-eEEEEecC------CCc-------ccccccceEEeCEEEECcCCCCC
Confidence 55667789999999987642 2 33 33455432 110 24 999999999998763
No 205
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=92.94 E-value=0.2 Score=37.83 Aligned_cols=55 Identities=15% Similarity=0.271 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 20 VVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 20 ~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
+...+.+..++.||++++++.|+++.- +. +.+.+. +++ +.++.+|.||+|.|..+
T Consensus 202 ~~~~l~~~l~~~GV~i~~~~~v~~v~~---~~---v~~~~~----~~~-------g~~i~~D~vv~a~G~~~ 256 (430)
T 3h28_A 202 SKRLVEDLFAERNIDWIANVAVKAIEP---DK---VIYEDL----NGN-------THEVPAKFTMFMPSFQG 256 (430)
T ss_dssp HHHHHHHHHHHTTCEEECSCEEEEECS---SE---EEEECT----TSC-------EEEEECSEEEEECEEEC
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEeC---Ce---EEEEec----CCC-------ceEEeeeEEEECCCCcc
Confidence 456778888999999999999999842 22 333321 111 46899999999988654
No 206
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=92.93 E-value=0.18 Score=38.43 Aligned_cols=55 Identities=20% Similarity=0.195 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
.+.+.+.+..++. +++++++.+.++.-+ +++..+.+. +.++.+|.||+|.|....
T Consensus 191 ~~~~~l~~~l~~~-v~i~~~~~v~~i~~~--~~v~~v~~~----------------g~~i~~D~Vv~a~G~~p~ 245 (449)
T 3kd9_A 191 EVTDILEEKLKKH-VNLRLQEITMKIEGE--ERVEKVVTD----------------AGEYKAELVILATGIKPN 245 (449)
T ss_dssp HHHHHHHHHHTTT-SEEEESCCEEEEECS--SSCCEEEET----------------TEEEECSEEEECSCEEEC
T ss_pred HHHHHHHHHHHhC-cEEEeCCeEEEEecc--CcEEEEEeC----------------CCEEECCEEEEeeCCccC
Confidence 3456667777788 999999999998653 355545442 368999999999998754
No 207
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=92.88 E-value=0.18 Score=38.30 Aligned_cols=55 Identities=16% Similarity=0.264 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 20 VVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 20 ~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
..+++.+..++.||++++++.|+++. .+++ ...+ .+|+ +.++.+|.||.|.|...
T Consensus 202 ~~~~l~~~l~~~GV~~~~~~~v~~v~---~~~~---~~~~----~~g~-------~~~i~~d~vi~~~G~~~ 256 (430)
T 3hyw_A 202 SKRLVEDLFAERNIDWIANVAVKAIE---PDKV---IYED----LNGN-------THEVPAKFTMFMPSFQG 256 (430)
T ss_dssp HHHHHHHHHHHTTCEEECSCEEEEEC---SSEE---EEEC----TTSC-------EEEEECSEEEEECEEEC
T ss_pred HHHHHHHHHHhCCeEEEeCceEEEEe---CCce---EEEe----eCCC-------ceEeecceEEEeccCCC
Confidence 44566777788999999999999983 3332 2222 2222 36899999999999664
No 208
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=92.82 E-value=0.24 Score=42.02 Aligned_cols=61 Identities=23% Similarity=0.283 Sum_probs=43.0
Q ss_pred HHHHHHCCCEEecCCceeEEEEecCCcEEEEEecccccc-CCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 25 GEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIA-KDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 25 ~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~-~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
.+++++.|++|++++.+.++.-++++++.+|++.+.... .+|+ ..++.+|.||+|.|....
T Consensus 323 ~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~-------~~~i~~D~Vv~a~G~~P~ 384 (965)
T 2gag_A 323 AAQAVADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGG-------TQRFEADVLAVAGGFNPV 384 (965)
T ss_dssp HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEE-------EEEEECSEEEEECCEEEC
T ss_pred HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCc-------eEEEEcCEEEECCCcCcC
Confidence 567788999999999999997621467888887641000 0011 167999999999997544
No 209
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=92.65 E-value=0.13 Score=39.92 Aligned_cols=63 Identities=21% Similarity=0.186 Sum_probs=43.1
Q ss_pred HHHHHHHHHH------CCCEEecCCceeEEEEecCCcEEEEEecccccc----------CCCCCCcCCCCCeEEEccEEE
Q psy9487 21 VKWLGEQAEA------MGVEIYPGIPASEVLYHGDGSVKGIATGDVGIA----------KDGSPKDTFARGMELHAKVTI 84 (101)
Q Consensus 21 d~~l~~~A~~------~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~----------~~g~~~~~~~~g~~i~A~~VI 84 (101)
.+.|.+.+++ .|++|++++.+.++.- ++++.+|++.+...+ .+|+ ..++.++.||
T Consensus 249 ~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~--~~~v~~v~~~~~~~~~~~~~~~~~~~~g~-------~~~i~~d~vi 319 (456)
T 1lqt_A 249 IKVLRGYADREPRPGHRRMVFRFLTSPIEIKG--KRKVERIVLGRNELVSDGSGRVAAKDTGE-------REELPAQLVV 319 (456)
T ss_dssp HHHHHHHHTCC-CTTSEEEEEECSEEEEEEEC--SSSCCEEEEEEEEEEECSSSSEEEEEEEE-------EEEEECSEEE
T ss_pred HHHHHHHhhcCCCCCCceEEEEeCCCCeEEec--CCcEeEEEEEEEEecCCCcccccccCCCc-------eEEEEcCEEE
Confidence 4566666766 7999999999999874 367777776531000 0111 1479999999
Q ss_pred EeecCCch
Q psy9487 85 FAEGCHGH 92 (101)
Q Consensus 85 ~A~G~~s~ 92 (101)
.|.|..+.
T Consensus 320 ~a~G~~p~ 327 (456)
T 1lqt_A 320 RSVGYRGV 327 (456)
T ss_dssp ECSCEECC
T ss_pred EccccccC
Confidence 99998764
No 210
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=92.39 E-value=0.14 Score=37.03 Aligned_cols=57 Identities=16% Similarity=0.166 Sum_probs=39.7
Q ss_pred HHHHH-HHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 24 LGEQA-EAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 24 l~~~A-~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
+.++. ++.|+++++++.+.++.-+ +++.+|.+.+. .+|+ ..++.+|.||+|.|....
T Consensus 196 ~~~~~~~~~gV~v~~~~~v~~i~~~--~~~~~v~~~~~---~~g~-------~~~i~~D~vi~a~G~~p~ 253 (335)
T 2a87_A 196 MLDRARNNDKIRFLTNHTVVAVDGD--TTVTGLRVRDT---NTGA-------ETTLPVTGVFVAIGHEPR 253 (335)
T ss_dssp HHHHHHHCTTEEEECSEEEEEEECS--SSCCEEEEEEE---TTSC-------CEEECCSCEEECSCEEEC
T ss_pred HHHHHhccCCcEEEeCceeEEEecC--CcEeEEEEEEc---CCCc-------eEEeecCEEEEccCCccC
Confidence 34343 5689999999999998753 45666766531 1222 267999999999997643
No 211
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=92.28 E-value=0.25 Score=37.82 Aligned_cols=51 Identities=12% Similarity=0.061 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 20 VVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 20 ~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
+.+.+.+..++.|+++++++.|+++. .. .|.+.+ |.++.+|.||+|.|...
T Consensus 190 ~~~~~~~~l~~~gV~i~~~~~v~~~~---~~---~v~~~~---------------g~~~~~D~vl~a~G~~P 240 (437)
T 4eqs_A 190 MNQPILDELDKREIPYRLNEEINAIN---GN---EITFKS---------------GKVEHYDMIIEGVGTHP 240 (437)
T ss_dssp GGHHHHHHHHHTTCCEEESCCEEEEE---TT---EEEETT---------------SCEEECSEEEECCCEEE
T ss_pred hHHHHHHHhhccceEEEeccEEEEec---CC---eeeecC---------------CeEEeeeeEEEEeceec
Confidence 44567888899999999999998873 22 245544 56899999999999764
No 212
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=92.18 E-value=0.76 Score=35.86 Aligned_cols=64 Identities=14% Similarity=0.164 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEecCC--cEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDG--SVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g--~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
.+.+.+.+..++.|++|++++.++++...+++ ..+.|.... .++.. ..++.+|.||+|.|....
T Consensus 251 ~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~----~~g~~------~~~~~~D~vi~a~G~~p~ 316 (519)
T 3qfa_A 251 DMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQS----TNSEE------IIEGEYNTVMLAIGRDAC 316 (519)
T ss_dssp HHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEE----SSSSC------EEEEEESEEEECSCEEES
T ss_pred HHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEE----CCCcE------EEEEECCEEEEecCCccc
Confidence 45667788889999999999988888643221 222344332 12211 146789999999997643
No 213
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=92.09 E-value=0.12 Score=40.06 Aligned_cols=65 Identities=22% Similarity=0.218 Sum_probs=41.8
Q ss_pred HHHHHHCCCEEecCCceeEEEEecCCcEEEEEecccc---ccCCCCCCcCCCCC--eEEEccEEEEeecCCc
Q psy9487 25 GEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVG---IAKDGSPKDTFARG--MELHAKVTIFAEGCHG 91 (101)
Q Consensus 25 ~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g---~~~~g~~~~~~~~g--~~i~A~~VI~A~G~~s 91 (101)
.+.+++.|+++++++.++++.- ++++.+|++.+.. .+.+|...+...+| .++.+|.||+|.|...
T Consensus 309 ~~~~~~~Gv~~~~~~~~~~i~~--~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p 378 (456)
T 2vdc_G 309 VAHAEEEGVEFIWQAAPEGFTG--DTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEP 378 (456)
T ss_dssp HHHHHHTTCEEECCSSSCCEEE--EEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEEC
T ss_pred HHHHHHCCCEEEeCCCceEEeC--CCcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCC
Confidence 4678889999999999999874 4666666553210 01122211111112 5799999999999754
No 214
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=91.95 E-value=0.064 Score=39.91 Aligned_cols=57 Identities=19% Similarity=0.086 Sum_probs=41.0
Q ss_pred HHHHHHHHHHH----HHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 18 GHVVKWLGEQA----EAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 18 ~~~d~~l~~~A----~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
..|+..+.+.+ ++.|+++++++.+..+..+. ....|++.+ |.++.+|.+|++.|...
T Consensus 198 ~~~~~~~~~~~~~~l~~~gi~v~~~~~v~~v~~~~--~~~~v~~~~---------------g~~i~~D~vi~~~g~~~ 258 (401)
T 3vrd_B 198 AQFTKGWERLYGFGTENALIEWHPGPDAAVVKTDT--EAMTVETSF---------------GETFKAAVINLIPPQRA 258 (401)
T ss_dssp HHHHHHHHHHSCTTSTTCSEEEECTTTTCEEEEET--TTTEEEETT---------------SCEEECSEEEECCCEEE
T ss_pred ccccHHHHHHHHHHHHhcCcEEEeCceEEEEEecc--cceEEEcCC---------------CcEEEeeEEEEecCcCC
Confidence 34555544443 57899999999999987752 223466655 57899999999988654
No 215
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=91.77 E-value=0.71 Score=32.55 Aligned_cols=59 Identities=20% Similarity=0.256 Sum_probs=41.7
Q ss_pred EEhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 15 VRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 15 v~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
++...+...+.+.+++.++++...+ +.....+ +.. .-+.+.+ +.++.++.+|+|+|+..
T Consensus 63 i~~~~l~~~~~~~~~~~~~~~~~~~-v~~~~~~-~~~-~~~~~~~---------------~~~~~~~~liiATG~~~ 121 (314)
T 4a5l_A 63 IDGNELMMNMRTQSEKYGTTIITET-IDHVDFS-TQP-FKLFTEE---------------GKEVLTKSVIIATGATA 121 (314)
T ss_dssp EEHHHHHHHHHHHHHHTTCEEECCC-EEEEECS-SSS-EEEEETT---------------CCEEEEEEEEECCCEEE
T ss_pred CCHHHHHHHHHHHHhhcCcEEEEeE-EEEeecC-CCc-eEEEECC---------------CeEEEEeEEEEcccccc
Confidence 5667777888999999999998764 4444442 222 2234433 46899999999999764
No 216
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=91.31 E-value=0.19 Score=39.94 Aligned_cols=46 Identities=28% Similarity=0.372 Sum_probs=35.5
Q ss_pred HHHHHHHCCCEEec--CCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 24 LGEQAEAMGVEIYP--GIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 24 l~~~A~~~Gv~i~~--gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
+++...+.+|++++ .+++.+|. ++ ||++.+ | ++.+|+||.|+|...
T Consensus 344 y~~al~~~nV~lv~~~~~~I~~it--~~----gv~~~d---------------G-~~~~D~IV~ATGf~~ 391 (545)
T 3uox_A 344 YYETYNRDNVHLVDIREAPIQEVT--PE----GIKTAD---------------A-AYDLDVIIYATGFDA 391 (545)
T ss_dssp HHHHTTSTTEEEEETTTSCEEEEE--TT----EEEESS---------------C-EEECSEEEECCCCBS
T ss_pred HHHHhcCCCEEEEecCCCCceEEc--cC----eEEeCC---------------C-eeecCEEEECCcccc
Confidence 45555666899986 67888874 22 688876 7 899999999999875
No 217
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=91.27 E-value=0.3 Score=37.70 Aligned_cols=52 Identities=23% Similarity=0.342 Sum_probs=36.2
Q ss_pred HHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 25 GEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 25 ~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
.+.+++.|++++.+++|..+..+ ++. +.+.. + ++ +.++.++.+|+|+|++..
T Consensus 99 ~~~~~~~gv~v~~~~~v~~i~~~-~~~-v~v~~-~------g~-------~~~~~~d~lviAtG~~p~ 150 (490)
T 2bc0_A 99 KEELESLGAKVYMESPVQSIDYD-AKT-VTALV-D------GK-------NHVETYDKLIFATGSQPI 150 (490)
T ss_dssp HHHHHHTTCEEETTCCEEEEETT-TTE-EEEEE-T------TE-------EEEEECSEEEECCCEEEC
T ss_pred HHHHHhCCCEEEeCCEEEEEECC-CCE-EEEEe-C------Cc-------EEEEECCEEEECCCCCcC
Confidence 34566789999999999998653 333 32331 2 00 257999999999997654
No 218
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=90.77 E-value=0.091 Score=40.02 Aligned_cols=54 Identities=13% Similarity=0.049 Sum_probs=39.3
Q ss_pred cEEEEhHHHHHHHHHHHHHCCCEEecCC-ceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCC
Q psy9487 12 NYVVRLGHVVKWLGEQAEAMGVEIYPGI-PASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 90 (101)
Q Consensus 12 ~~~v~r~~~d~~l~~~A~~~Gv~i~~gt-~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~ 90 (101)
++.+++..++.+|.+++++.|++++... .+.++ . . ....+++||+|+|.+
T Consensus 116 ~~~v~~~~l~~~L~~~~~~~Gv~v~~~~v~~~~l-----------~--~----------------~~~~ad~VV~AdG~~ 166 (430)
T 3ihm_A 116 SRAVDYRLYQPMLMRALEARGGKFCYDAVSAEDL-----------E--G----------------LSEQYDLLVVCTGKY 166 (430)
T ss_dssp EBEECHHHHHHHHHHHHHHTTCEEEECCCCGGGH-----------H--H----------------HHTTSSEEEECCCCT
T ss_pred ceeecHHHHHHHHHHHHHHcCCEEEEEecchhhh-----------h--h----------------hcccCCEEEECCCCc
Confidence 5788999999999999999999998632 11111 0 0 112578999999998
Q ss_pred chhh
Q psy9487 91 GHLT 94 (101)
Q Consensus 91 s~l~ 94 (101)
|.+.
T Consensus 167 S~~~ 170 (430)
T 3ihm_A 167 ALGK 170 (430)
T ss_dssp TGGG
T ss_pred chHH
Confidence 8763
No 219
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=90.57 E-value=0.36 Score=36.61 Aligned_cols=51 Identities=18% Similarity=0.178 Sum_probs=37.1
Q ss_pred HHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 22 KWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 22 ~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
..+.+.+++.|++++. ..|+.+..+ ++ .|.+.+ +.++.+|.+|+|+|+...
T Consensus 63 ~~l~~~~~~~gv~~~~-~~v~~id~~--~~--~V~~~~---------------g~~i~~d~lviAtG~~~~ 113 (437)
T 3sx6_A 63 FPIRHYVERKGIHFIA-QSAEQIDAE--AQ--NITLAD---------------GNTVHYDYLMIATGPKLA 113 (437)
T ss_dssp EECHHHHHTTTCEEEC-SCEEEEETT--TT--EEEETT---------------SCEEECSEEEECCCCEEC
T ss_pred HHHHHHHHHCCCEEEE-eEEEEEEcC--CC--EEEECC---------------CCEEECCEEEECCCCCcC
Confidence 3356677789999986 588888653 33 345544 457999999999998654
No 220
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=90.33 E-value=0.23 Score=37.10 Aligned_cols=46 Identities=17% Similarity=0.154 Sum_probs=33.6
Q ss_pred HHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 26 EQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 26 ~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
+..++.|++++.+++|+.+..+ .+. |. .+ +.++.++.+|+|+|+..
T Consensus 68 ~~~~~~~v~~~~g~~v~~id~~--~~~--V~-~~---------------g~~~~~d~lViATGs~p 113 (367)
T 1xhc_A 68 DWYRKRGIEIRLAEEAKLIDRG--RKV--VI-TE---------------KGEVPYDTLVLATGARA 113 (367)
T ss_dssp HHHHHHTEEEECSCCEEEEETT--TTE--EE-ES---------------SCEEECSEEEECCCEEE
T ss_pred HHHHhCCcEEEECCEEEEEECC--CCE--EE-EC---------------CcEEECCEEEECCCCCC
Confidence 4456779999999999988542 332 33 22 35799999999999754
No 221
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=89.99 E-value=1.5 Score=34.59 Aligned_cols=62 Identities=21% Similarity=0.253 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEe-----cC---CcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCC
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYH-----GD---GSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 90 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~-----~~---g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~ 90 (101)
.+.+.+.+..++.|+++++++.++++... ++ +++. +.... .+|+. .++.+|.||+|.|..
T Consensus 327 ~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~-v~~~~----~~g~~-------~~~~~D~vi~a~G~~ 394 (598)
T 2x8g_A 327 QMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLL-VKGHY----TDGKK-------FEEEFETVIFAVGRE 394 (598)
T ss_dssp HHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEE-EEEEE----TTSCE-------EEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEE-EEEEe----CCCcE-------EeccCCEEEEEeCCc
Confidence 34556677788899999999988887531 12 3332 33211 11211 234599999999976
Q ss_pred ch
Q psy9487 91 GH 92 (101)
Q Consensus 91 s~ 92 (101)
..
T Consensus 395 p~ 396 (598)
T 2x8g_A 395 PQ 396 (598)
T ss_dssp EC
T ss_pred cc
Confidence 54
No 222
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=89.98 E-value=0.12 Score=37.06 Aligned_cols=57 Identities=5% Similarity=0.055 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 20 VVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 20 ~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
+.+.+.++.++.|+.+++++ +..+.-+ ++++.+|++.+ |.++.++.+|++.|...+.
T Consensus 182 ~~~~~~~~l~~~g~~~~~~~-v~~~~~~-~~~~~~v~~~~---------------g~~i~~~~~vi~~g~~~~~ 238 (304)
T 4fk1_A 182 LSQTIMDELSNKNIPVITES-IRTLQGE-GGYLKKVEFHS---------------GLRIERAGGFIVPTFFRPN 238 (304)
T ss_dssp CCHHHHHHHHTTTCCEECSC-EEEEESG-GGCCCEEEETT---------------SCEECCCEEEECCEEECSS
T ss_pred chhhhhhhhhccceeEeeee-EEEeecC-CCeeeeeeccc---------------cceeeecceeeeeccccCC
Confidence 44556778888999999874 6666653 67888888876 5688888888888765543
No 223
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=89.93 E-value=0.42 Score=36.46 Aligned_cols=61 Identities=8% Similarity=-0.030 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHCC-CEEecCCceeEEEEecCCc----EEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCC
Q psy9487 20 VVKWLGEQAEAMG-VEIYPGIPASEVLYHGDGS----VKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 90 (101)
Q Consensus 20 ~d~~l~~~A~~~G-v~i~~gt~v~~i~~~~~g~----v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~ 90 (101)
+.+..-.-++.+| .+|+++++|++|..++++. .+.|.+.+ .+|+. ..++.||.||+|....
T Consensus 242 ~~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~----~~g~~------~~~~~ad~VI~a~p~~ 307 (504)
T 1sez_A 242 MQTLTDAICKDLREDELRLNSRVLELSCSCTEDSAIDSWSIISAS----PHKRQ------SEEESFDAVIMTAPLC 307 (504)
T ss_dssp THHHHHHHHTTSCTTTEETTCCEEEEEEECSSSSSSCEEEEEEBC----SSSSC------BCCCEESEEEECSCHH
T ss_pred HHHHHHHHHhhcccceEEcCCeEEEEEecCCCCcccceEEEEEcC----CCCcc------ceeEECCEEEECCCHH
Confidence 3443333345567 8999999999999863331 35566643 11210 0368999999997643
No 224
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=89.84 E-value=0.76 Score=35.00 Aligned_cols=56 Identities=9% Similarity=-0.003 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCC
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 90 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~ 90 (101)
.+.+.|++.. +.+|+++++|++|..+ ++.+ .|.+.+ |+. ....+.||.||+|.+..
T Consensus 242 ~l~~~l~~~l---~~~i~~~~~V~~I~~~-~~~v-~v~~~~------~~~-----~~~~~~ad~vI~t~p~~ 297 (498)
T 2iid_A 242 KLPTAMYRDI---QDKVHFNAQVIKIQQN-DQKV-TVVYET------LSK-----ETPSVTADYVIVCTTSR 297 (498)
T ss_dssp HHHHHHHHHT---GGGEESSCEEEEEEEC-SSCE-EEEEEC------SSS-----CCCEEEESEEEECSCHH
T ss_pred HHHHHHHHhc---ccccccCCEEEEEEEC-CCeE-EEEEec------CCc-----ccceEEeCEEEECCChH
Confidence 4444555444 3389999999999985 4554 465543 110 01368999999998764
No 225
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=89.48 E-value=0.64 Score=37.48 Aligned_cols=52 Identities=17% Similarity=0.261 Sum_probs=37.4
Q ss_pred HHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEe-ccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 22 KWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIAT-GDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 22 ~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~-~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
.++.+..++.||++++++.++++. +++ +.+ .+ |+ ..++.+|.||+|.|....
T Consensus 577 ~~~~~~l~~~GV~v~~~~~v~~i~--~~~----v~~~~~------G~-------~~~i~~D~Vi~a~G~~p~ 629 (671)
T 1ps9_A 577 WIHRTTLLSRGVKMIPGVSYQKID--DDG----LHVVIN------GE-------TQVLAVDNVVICAGQEPN 629 (671)
T ss_dssp HHHHHHHHHTTCEEECSCEEEEEE--TTE----EEEEET------TE-------EEEECCSEEEECCCEEEC
T ss_pred HHHHHHHHhcCCEEEeCcEEEEEe--CCe----EEEecC------Ce-------EEEEeCCEEEECCCcccc
Confidence 345677788999999999999885 232 333 22 11 157999999999998764
No 226
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=88.96 E-value=0.3 Score=36.81 Aligned_cols=47 Identities=23% Similarity=0.220 Sum_probs=35.0
Q ss_pred HHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 27 QAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 27 ~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
.+++.|++++.+++|+.+..+ ++ .|.+.+ +.++.++.+|+|+|+...
T Consensus 68 ~~~~~~v~~~~~~~v~~i~~~--~~--~v~~~~---------------g~~~~~d~lviAtG~~~~ 114 (408)
T 2gqw_A 68 CKRAPEVEWLLGVTAQSFDPQ--AH--TVALSD---------------GRTLPYGTLVLATGAAPR 114 (408)
T ss_dssp CTTSCSCEEEETCCEEEEETT--TT--EEEETT---------------SCEEECSEEEECCCEEEC
T ss_pred HHHHCCCEEEcCCEEEEEECC--CC--EEEECC---------------CCEEECCEEEECCCCCCC
Confidence 346789999999999998653 33 244543 457999999999998653
No 227
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=88.95 E-value=0.51 Score=35.53 Aligned_cols=47 Identities=17% Similarity=0.280 Sum_probs=35.3
Q ss_pred HHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 26 EQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 26 ~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
+..++.|++++.+++|+.+..+ .+ .|.+.+ |.++.++.+|+|+|+..
T Consensus 65 ~~~~~~~i~~~~~~~v~~id~~--~~--~v~~~~---------------g~~~~~d~lvlAtG~~p 111 (410)
T 3ef6_A 65 DWYGEARIDMLTGPEVTALDVQ--TR--TISLDD---------------GTTLSADAIVIATGSRA 111 (410)
T ss_dssp THHHHTTCEEEESCCEEEEETT--TT--EEEETT---------------SCEEECSEEEECCCEEE
T ss_pred HHHHHCCCEEEeCCEEEEEECC--CC--EEEECC---------------CCEEECCEEEEccCCcc
Confidence 3456789999999999998653 33 244543 46899999999999763
No 228
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=88.83 E-value=0.84 Score=34.91 Aligned_cols=50 Identities=22% Similarity=0.286 Sum_probs=35.1
Q ss_pred CCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 32 GVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 32 Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
.++|++++.++++..++++.+. |.+.+ .+|+. .++.+|.||+|.|.....
T Consensus 225 ~v~i~~~~~v~~i~~~~~~~v~-v~~~~----~~G~~-------~~i~~D~vi~a~G~~p~~ 274 (466)
T 3l8k_A 225 KLNIKFNSPVTEVKKIKDDEYE-VIYST----KDGSK-------KSIFTNSVVLAAGRRPVI 274 (466)
T ss_dssp CCCEECSCCEEEEEEEETTEEE-EEECC----TTSCC-------EEEEESCEEECCCEEECC
T ss_pred EEEEEECCEEEEEEEcCCCcEE-EEEEe----cCCce-------EEEEcCEEEECcCCCccc
Confidence 3999999999999875214443 66542 12321 479999999999987544
No 229
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=88.81 E-value=0.85 Score=34.76 Aligned_cols=52 Identities=23% Similarity=0.117 Sum_probs=33.8
Q ss_pred HHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 23 WLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 23 ~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
.+.+.+++.|++++.++.+. .+ ... +.|.+.+ |+ ..++.++.+|+|+|+...
T Consensus 98 ~~~~~~~~~~v~~~~g~~~~---i~-~~~-~~v~~~~------G~-------~~~~~~d~lviAtG~~p~ 149 (468)
T 2qae_A 98 GVEYLFKKNKVTYYKGEGSF---ET-AHS-IRVNGLD------GK-------QEMLETKKTIIATGSEPT 149 (468)
T ss_dssp HHHHHHHHHTCEEEEEEEEE---EE-TTE-EEEEETT------SC-------EEEEEEEEEEECCCEEEC
T ss_pred HHHHHHHhCCCEEEEEEEEE---ee-CCE-EEEEecC------Cc-------eEEEEcCEEEECCCCCcC
Confidence 34566777899999987542 33 333 3355433 11 157999999999997543
No 230
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=88.72 E-value=0.6 Score=35.52 Aligned_cols=53 Identities=8% Similarity=0.013 Sum_probs=38.5
Q ss_pred HHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 24 LGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 24 l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
+.+..++.|++++.+++|+++..+ .+.+.+.... + +.++.++.+|+|+|+...
T Consensus 64 ~~~~~~~~gi~~~~~~~V~~id~~--~~~v~v~~~~-~-------------~~~~~~d~lviAtG~~p~ 116 (452)
T 3oc4_A 64 TEEELRRQKIQLLLNREVVAMDVE--NQLIAWTRKE-E-------------QQWYSYDKLILATGASQF 116 (452)
T ss_dssp CHHHHHHTTEEEECSCEEEEEETT--TTEEEEEETT-E-------------EEEEECSEEEECCCCCBC
T ss_pred CHHHHHHCCCEEEECCEEEEEECC--CCEEEEEecC-c-------------eEEEEcCEEEECCCcccC
Confidence 456677899999999999999764 3333344211 0 368999999999998653
No 231
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=88.32 E-value=0.23 Score=39.32 Aligned_cols=42 Identities=31% Similarity=0.407 Sum_probs=32.6
Q ss_pred HCCCEEec--CCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 30 AMGVEIYP--GIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 30 ~~Gv~i~~--gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
+.+|+++. ..++.++. ++ ||++.+ |.++.+|+||.|+|....
T Consensus 342 ~~nV~lv~~~~~~I~~it--~~----gv~~~d---------------G~~~~~DvIV~ATGf~~~ 385 (540)
T 3gwf_A 342 RPNVEAVAIKENPIREVT--AK----GVVTED---------------GVLHELDVLVFATGFDAV 385 (540)
T ss_dssp STTEEEEETTTSCEEEEC--SS----EEEETT---------------CCEEECSEEEECCCBSCS
T ss_pred CCCEEEEeCCCCCccEEe--cC----eEEcCC---------------CCEEECCEEEECCccCcc
Confidence 45899885 66888774 22 688876 678999999999998765
No 232
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=88.23 E-value=0.65 Score=35.21 Aligned_cols=54 Identities=15% Similarity=0.198 Sum_probs=35.7
Q ss_pred HHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 25 GEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 25 ~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
.+..++.|++++.++.|..+..+ + +.+.+.... +|+ ..++.++.+|+|+|++..
T Consensus 63 ~~~~~~~gv~~~~~~~v~~i~~~-~-~~v~~~~~~-----~g~-------~~~~~~d~lviAtG~~p~ 116 (447)
T 1nhp_A 63 GEKMESRGVNVFSNTEITAIQPK-E-HQVTVKDLV-----SGE-------ERVENYDKLIISPGAVPF 116 (447)
T ss_dssp HHHHHHTTCEEEETEEEEEEETT-T-TEEEEEETT-----TCC-------EEEEECSEEEECCCEEEC
T ss_pred HHHHHHCCCEEEECCEEEEEeCC-C-CEEEEEecC-----CCc-------eEEEeCCEEEEcCCCCcC
Confidence 44556789999999999988653 3 333333211 111 135999999999997653
No 233
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=88.07 E-value=0.57 Score=35.58 Aligned_cols=54 Identities=9% Similarity=0.008 Sum_probs=36.6
Q ss_pred HHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 25 GEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 25 ~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
.+.+++.|++++.+++|..+..+ ++. +.+.... +++ +.++.++.+|+|+|++..
T Consensus 65 ~~~~~~~gv~~~~~~~v~~i~~~-~~~-v~v~~~~-----~g~-------~~~~~~d~lviAtGs~p~ 118 (452)
T 2cdu_A 65 PEELSNLGANVQMRHQVTNVDPE-TKT-IKVKDLI-----TNE-------EKTEAYDKLIMTTGSKPT 118 (452)
T ss_dssp HHHHHHTTCEEEESEEEEEEEGG-GTE-EEEEETT-----TCC-------EEEEECSEEEECCCEEEC
T ss_pred HHHHHHcCCEEEeCCEEEEEEcC-CCE-EEEEecC-----CCc-------eEEEECCEEEEccCCCcC
Confidence 45567789999999999998654 333 2233211 111 357999999999997654
No 234
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=87.88 E-value=0.59 Score=35.68 Aligned_cols=51 Identities=6% Similarity=0.022 Sum_probs=35.5
Q ss_pred HHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 28 AEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 28 A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
.++.|++++.+++|+.|..+ .+...+.... +++ +.++.+|.+|+|+|+...
T Consensus 67 ~~~~~i~~~~~~~V~~id~~--~~~~~~~~~~-----~~~-------~~~~~yd~lVIATGs~p~ 117 (437)
T 4eqs_A 67 YDRKQITVKTYHEVIAINDE--RQTVSVLNRK-----TNE-------QFEESYDKLILSPGASAN 117 (437)
T ss_dssp HHHHCCEEEETEEEEEEETT--TTEEEEEETT-----TTE-------EEEEECSEEEECCCEEEC
T ss_pred HHhcCCEEEeCCeEEEEEcc--CcEEEEEecc-----CCc-------eEEEEcCEEEECCCCccc
Confidence 45679999999999998653 4444444322 111 367999999999998643
No 235
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=87.81 E-value=0.83 Score=33.84 Aligned_cols=48 Identities=19% Similarity=0.191 Sum_probs=35.3
Q ss_pred HHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 25 GEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 25 ~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
.+.+++.|++++.+++|+.+..+ +.. |.+.+ .++.++.+|+|+|+...
T Consensus 67 ~~~~~~~~v~~~~~~~v~~i~~~-~~~---v~~~~----------------~~~~~d~lviAtG~~p~ 114 (384)
T 2v3a_A 67 GAMAEQLNARILTHTRVTGIDPG-HQR---IWIGE----------------EEVRYRDLVLAWGAEPI 114 (384)
T ss_dssp HHHHHHTTCEEECSCCCCEEEGG-GTE---EEETT----------------EEEECSEEEECCCEEEC
T ss_pred HHHHHhCCcEEEeCCEEEEEECC-CCE---EEECC----------------cEEECCEEEEeCCCCcC
Confidence 44457889999999999988653 222 34432 47999999999998654
No 236
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=87.74 E-value=1.3 Score=34.22 Aligned_cols=59 Identities=22% Similarity=0.195 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHCCCEEecCCceeEEEEec--CCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 20 VVKWLGEQAEAMGVEIYPGIPASEVLYHG--DGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 20 ~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~--~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
+..++.+.+++.|++++.++ +..+..++ ++..+.|.+.+ |+ ..++.++.+|+|+|+...
T Consensus 97 ~~~~~~~~~~~~gv~~~~g~-~~~i~~~~~~~~~~~~V~~~~------g~-------~~~~~~d~lviATGs~p~ 157 (499)
T 1xdi_A 97 QSADITAQLLSMGVQVIAGR-GELIDSTPGLARHRIKATAAD------GS-------TSEHEADVVLVATGASPR 157 (499)
T ss_dssp HHHHHHHHHHHTTCEEEESE-EEECCSSSCCSSEEEEEECTT------SC-------EEEEEESEEEECCCEEEC
T ss_pred HHHHHHHHHHhCCCEEEEeE-EEEecCcccCCCCEEEEEeCC------Cc-------EEEEEeCEEEEcCCCCCC
Confidence 34456777888999999986 54432100 01333344432 11 027999999999997654
No 237
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=87.63 E-value=1 Score=34.66 Aligned_cols=54 Identities=9% Similarity=0.005 Sum_probs=34.8
Q ss_pred HHHH-HHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 25 GEQA-EAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 25 ~~~A-~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
.+.. +..|++++.+++|..+..+ ++. +-+...+ +|+ ..++.++.+|+|+|+...
T Consensus 99 ~~~~~~~~gv~~~~~~~v~~i~~~-~~~-v~v~~~~-----~g~-------~~~~~~d~lviAtG~~p~ 153 (480)
T 3cgb_A 99 VKTFRDKYGIDAKVRHEVTKVDTE-KKI-VYAEHTK-----TKD-------VFEFSYDRLLIATGVRPV 153 (480)
T ss_dssp HHHHHHTTCCEEESSEEEEEEETT-TTE-EEEEETT-----TCC-------EEEEECSEEEECCCEEEC
T ss_pred HHHHHhhcCCEEEeCCEEEEEECC-CCE-EEEEEcC-----CCc-------eEEEEcCEEEECCCCccc
Confidence 3344 3459999999999998753 333 3243311 111 037999999999997653
No 238
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=87.42 E-value=1.3 Score=33.76 Aligned_cols=53 Identities=13% Similarity=0.044 Sum_probs=34.0
Q ss_pred HHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 23 WLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 23 ~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
.+.+.+++.|++++.++.+ . .+ .+. +.|.+.+ |. ..++.++.+|+|+|+....
T Consensus 102 ~~~~~~~~~gv~~~~g~~~-~--~~-~~~-~~v~~~~------gg-------~~~~~~d~lViAtGs~p~~ 154 (474)
T 1zmd_A 102 GIAHLFKQNKVVHVNGYGK-I--TG-KNQ-VTATKAD------GG-------TQVIDTKNILIATGSEVTP 154 (474)
T ss_dssp HHHHHHHHTTCEEEESEEE-E--EE-TTE-EEEECTT------SC-------EEEEEEEEEEECCCEEECC
T ss_pred HHHHHHHhCCCEEEEEEEE-E--ec-CCE-EEEEecC------CC-------cEEEEeCEEEECCCCCCCC
Confidence 3456677899999998643 2 23 333 3354432 00 1479999999999986543
No 239
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=87.20 E-value=0.84 Score=35.89 Aligned_cols=57 Identities=11% Similarity=0.077 Sum_probs=38.8
Q ss_pred HHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 21 VKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 21 d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
.+.+...+++.|++++.+++|+++..+ ++. +-+.... +|+ ...+.++.+|+|+|+..
T Consensus 96 ~~~~~~~~~~~gi~v~~~~~V~~id~~-~~~-v~v~~~~-----~g~-------~~~~~~d~lviAtG~~p 152 (588)
T 3ics_A 96 VQTVERMSKRFNLDIRVLSEVVKINKE-EKT-ITIKNVT-----TNE-------TYNEAYDVLILSPGAKP 152 (588)
T ss_dssp SSCHHHHHHHTTCEEECSEEEEEEETT-TTE-EEEEETT-----TCC-------EEEEECSEEEECCCEEE
T ss_pred ccCHHHHHHhcCcEEEECCEEEEEECC-CCE-EEEeecC-----CCC-------EEEEeCCEEEECCCCCC
Confidence 334555667889999999999999764 333 3344311 111 13789999999999754
No 240
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=87.15 E-value=0.74 Score=35.70 Aligned_cols=61 Identities=20% Similarity=0.107 Sum_probs=39.4
Q ss_pred EhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 16 RLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 16 ~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
....+..++.++. +.|++++.++.|.++..+ +..+.-....+ ++ -..+.++.+|+|+|+..
T Consensus 159 ~~~~~~~~l~~~l-~~~v~~~~~~~v~~i~~~-~~~~~~~~~~~------~~-------~~~~~~d~lvlAtGa~~ 219 (493)
T 1y56_A 159 DSRKVVEELVGKL-NENTKIYLETSALGVFDK-GEYFLVPVVRG------DK-------LIEILAKRVVLATGAID 219 (493)
T ss_dssp EHHHHHHHHHHTC-CTTEEEETTEEECCCEEC-SSSEEEEEEET------TE-------EEEEEESCEEECCCEEE
T ss_pred CHHHHHHHHHHHH-hcCCEEEcCCEEEEEEcC-CcEEEEEEecC------Ce-------EEEEECCEEEECCCCCc
Confidence 3444445555555 679999999999998774 44443222221 10 13699999999999764
No 241
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=86.93 E-value=0.55 Score=34.98 Aligned_cols=53 Identities=23% Similarity=0.254 Sum_probs=36.1
Q ss_pred HHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 24 LGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 24 l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
+.+.+++.|++++.+ .|+.+..+ ++. |.+.+ .+++ ..++.+|.+|+|+|+...
T Consensus 62 ~~~~~~~~gv~~~~~-~v~~i~~~--~~~--V~~~~----g~~~-------~~~~~~d~lViAtG~~~~ 114 (409)
T 3h8l_A 62 LSEALPEKGIQFQEG-TVEKIDAK--SSM--VYYTK----PDGS-------MAEEEYDYVIVGIGAHLA 114 (409)
T ss_dssp HHHHTGGGTCEEEEC-EEEEEETT--TTE--EEEEC----TTSC-------EEEEECSEEEECCCCEEC
T ss_pred HHHHHhhCCeEEEEe-eEEEEeCC--CCE--EEEcc----CCcc-------cceeeCCEEEECCCCCcC
Confidence 466667889999988 88888653 332 44433 1111 146999999999998654
No 242
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=86.72 E-value=0.84 Score=34.66 Aligned_cols=48 Identities=17% Similarity=0.152 Sum_probs=31.6
Q ss_pred HHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 24 LGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 24 l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
+.+.+++.|++++.++.+. .+ . ..+.|.+ + |.++.++.+|+|+|+...
T Consensus 95 ~~~~~~~~~v~~~~g~~~~---i~-~-~~~~v~~-~---------------g~~~~~d~lviAtG~~p~ 142 (455)
T 2yqu_A 95 VEFLFKKNGIARHQGTARF---LS-E-RKVLVEE-T---------------GEELEARYILIATGSAPL 142 (455)
T ss_dssp HHHHHHHHTCEEEESCEEE---SS-S-SEEEETT-T---------------CCEEEEEEEEECCCEEEC
T ss_pred HHHHHHhCCCEEEEeEEEE---ec-C-CeEEEee-C---------------CEEEEecEEEECCCCCCC
Confidence 4556777899999987542 22 2 2222332 2 357999999999998543
No 243
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=86.58 E-value=0.96 Score=34.76 Aligned_cols=55 Identities=18% Similarity=0.152 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 20 VVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 20 ~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
+..++.+..++.|++++.++ +..+ + ... +.|.+.+ |+ ..++.++.+|+|+|+...
T Consensus 107 ~~~~~~~~~~~~gv~~~~g~-~~~i--~-~~~-~~v~~~~------g~-------~~~~~~d~lviAtGs~p~ 161 (479)
T 2hqm_A 107 LNGIYQKNLEKEKVDVVFGW-ARFN--K-DGN-VEVQKRD------NT-------TEVYSANHILVATGGKAI 161 (479)
T ss_dssp HHHHHHHHHHHTTEEEEEEE-EEEC--T-TSC-EEEEESS------SC-------CEEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHHhCCCEEEEeE-EEEe--e-CCE-EEEEeCC------Cc-------EEEEEeCEEEEcCCCCCC
Confidence 33455666778999999885 4433 2 333 3344432 11 137999999999998643
No 244
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=86.47 E-value=0.42 Score=37.10 Aligned_cols=45 Identities=20% Similarity=0.292 Sum_probs=34.2
Q ss_pred HHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 29 EAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 29 ~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
++.|++++.+++|+.+..+ + + .|.+.+ |.++.++.+|+|+|+...
T Consensus 101 ~~~gv~~~~g~~v~~id~~-~-~--~V~~~~---------------g~~i~yd~lviATGs~p~ 145 (493)
T 1m6i_A 101 ENGGVAVLTGKKVVQLDVR-D-N--MVKLND---------------GSQITYEKCLIATGGTPR 145 (493)
T ss_dssp TTCEEEEEETCCEEEEEGG-G-T--EEEETT---------------SCEEEEEEEEECCCEEEC
T ss_pred hcCCeEEEcCCEEEEEECC-C-C--EEEECC---------------CCEEECCEEEECCCCCCC
Confidence 3579999999999998763 3 2 245544 467999999999998654
No 245
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=86.43 E-value=1.5 Score=33.25 Aligned_cols=44 Identities=16% Similarity=0.169 Sum_probs=32.5
Q ss_pred HHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCC-eEEEccEEEEeecCCc
Q psy9487 29 EAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARG-MELHAKVTIFAEGCHG 91 (101)
Q Consensus 29 ~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g-~~i~A~~VI~A~G~~s 91 (101)
++.|++++.+++|+.+..+ . ..|.+.+ + .++.++.+|+|+|+..
T Consensus 70 ~~~gi~v~~~~~v~~i~~~--~--~~v~~~~---------------g~~~~~~d~lviAtG~~p 114 (449)
T 3kd9_A 70 KKRGIDLHLNAEVIEVDTG--Y--VRVRENG---------------GEKSYEWDYLVFANGASP 114 (449)
T ss_dssp HHTTCEEETTCEEEEECSS--E--EEEECSS---------------SEEEEECSEEEECCCEEE
T ss_pred HhcCcEEEecCEEEEEecC--C--CEEEECC---------------ceEEEEcCEEEECCCCCC
Confidence 6789999999999988432 2 2344432 2 4799999999999754
No 246
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=86.20 E-value=0.94 Score=33.91 Aligned_cols=48 Identities=21% Similarity=0.205 Sum_probs=36.0
Q ss_pred HHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 25 GEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 25 ~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
.+..++.|++++.+++|+.+..+ ++ .|.+.+ +..+.++.+|+|+|+..
T Consensus 72 ~~~~~~~~i~~~~~~~v~~id~~--~~--~v~~~~---------------g~~~~~d~lvlAtG~~~ 119 (415)
T 3lxd_A 72 AQFWEDKAVEMKLGAEVVSLDPA--AH--TVKLGD---------------GSAIEYGKLIWATGGDP 119 (415)
T ss_dssp HHHHHHTTEEEEETCCEEEEETT--TT--EEEETT---------------SCEEEEEEEEECCCEEC
T ss_pred HHHHHHCCcEEEeCCEEEEEECC--CC--EEEECC---------------CCEEEeeEEEEccCCcc
Confidence 45566789999999999998653 33 244443 46899999999999653
No 247
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=85.96 E-value=0.99 Score=34.50 Aligned_cols=50 Identities=16% Similarity=0.177 Sum_probs=33.6
Q ss_pred HHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeE--EEccEEEEeecCCc
Q psy9487 22 KWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGME--LHAKVTIFAEGCHG 91 (101)
Q Consensus 22 ~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~--i~A~~VI~A~G~~s 91 (101)
.++.+.+++.|++++.+ .+..+ + .. ...|.+.+ |.+ +.++.+|+|+|+..
T Consensus 93 ~~~~~~~~~~~v~~~~g-~v~~i--d-~~-~~~V~~~~---------------g~~~~~~~d~lviAtG~~p 144 (466)
T 3l8k_A 93 QHKRNMSQYETLTFYKG-YVKIK--D-PT-HVIVKTDE---------------GKEIEAETRYMIIASGAET 144 (466)
T ss_dssp HHHHHHTTCTTEEEESE-EEEEE--E-TT-EEEEEETT---------------SCEEEEEEEEEEECCCEEE
T ss_pred chHHHHHHhCCCEEEEe-EEEEe--c-CC-eEEEEcCC---------------CcEEEEecCEEEECCCCCc
Confidence 55566677789999988 45544 2 22 23355433 345 99999999999754
No 248
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=84.90 E-value=1.2 Score=34.55 Aligned_cols=53 Identities=11% Similarity=0.052 Sum_probs=35.9
Q ss_pred HHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 25 GEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 25 ~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
...+++.|++++.+++|+++..+ ++.+-+.... +|+ ..++.++.+|+|+|+..
T Consensus 65 ~~~~~~~~i~~~~~~~V~~id~~--~~~v~~~~~~-----~g~-------~~~~~~d~lviAtG~~p 117 (565)
T 3ntd_A 65 ESFKARFNVEVRVKHEVVAIDRA--AKLVTVRRLL-----DGS-------EYQESYDTLLLSPGAAP 117 (565)
T ss_dssp HHHHHHHCCEEETTEEEEEEETT--TTEEEEEETT-----TCC-------EEEEECSEEEECCCEEE
T ss_pred HHHHHhcCcEEEECCEEEEEECC--CCEEEEEecC-----CCC-------eEEEECCEEEECCCCCC
Confidence 44455679999999999999763 3333344321 121 24799999999999853
No 249
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=84.74 E-value=2 Score=32.84 Aligned_cols=46 Identities=26% Similarity=0.331 Sum_probs=31.6
Q ss_pred HHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 25 GEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 25 ~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
.+.+++.|++++.++.+. .+ ... |.+. |.++.++.+|+|+|++...
T Consensus 100 ~~~~~~~gv~~~~g~~~~---~~-~~~---v~v~----------------g~~~~~d~lViATGs~p~~ 145 (464)
T 2eq6_A 100 GTLLKGNGVELLRGFARL---VG-PKE---VEVG----------------GERYGAKSLILATGSEPLE 145 (464)
T ss_dssp HHHHHHTTCEEEESCEEE---EE-TTE---EEET----------------TEEEEEEEEEECCCEEECC
T ss_pred HHHHHhCCCEEEeeeEEE---cc-CCE---EEEc----------------cEEEEeCEEEEcCCCCCCC
Confidence 455677899999997543 33 332 3332 1579999999999986543
No 250
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=84.72 E-value=0.98 Score=34.20 Aligned_cols=44 Identities=14% Similarity=0.174 Sum_probs=32.2
Q ss_pred HHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 28 AEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 28 A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
+++.|++++.+ +|++|..+ +.+ |.+.+ |.++..|.+|+|+|+..
T Consensus 66 ~~~~gv~~i~~-~v~~Id~~-~~~---V~~~~---------------g~~i~YD~LViAtG~~~ 109 (430)
T 3hyw_A 66 LPKFNIEFINE-KAESIDPD-ANT---VTTQS---------------GKKIEYDYLVIATGPKL 109 (430)
T ss_dssp GGGGTEEEECS-CEEEEETT-TTE---EEETT---------------CCEEECSEEEECCCCEE
T ss_pred HHHCCcEEEEe-EEEEEECC-CCE---EEECC---------------CCEEECCEEEEeCCCCc
Confidence 45679999887 68888653 332 45554 56899999999999853
No 251
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=84.22 E-value=0.98 Score=34.45 Aligned_cols=55 Identities=15% Similarity=-0.027 Sum_probs=31.0
Q ss_pred HHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 23 WLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 23 ~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
++...++..|++++.+++|+++..+ ++.+-+.... +|+ ...+.++.+|+|+|+..
T Consensus 71 ~~~~~~~~~gi~~~~~~~V~~id~~--~~~v~~~~~~-----~g~-------~~~~~~d~lviAtG~~p 125 (472)
T 3iwa_A 71 DPEFFRINKDVEALVETRAHAIDRA--AHTVEIENLR-----TGE-------RRTLKYDKLVLALGSKA 125 (472)
T ss_dssp ----------CEEECSEEEEEEETT--TTEEEEEETT-----TCC-------EEEEECSEEEECCCEEE
T ss_pred CHHHHhhhcCcEEEECCEEEEEECC--CCEEEEeecC-----CCC-------EEEEECCEEEEeCCCCc
Confidence 3333444689999999999999763 3333344311 121 14799999999999754
No 252
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=83.89 E-value=0.61 Score=36.98 Aligned_cols=41 Identities=20% Similarity=0.268 Sum_probs=30.1
Q ss_pred HCCCEEe--cCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 30 AMGVEIY--PGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 30 ~~Gv~i~--~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
+-+|+++ ...++.+|. ++ ||++.+ | ++.+|+||.|+|....
T Consensus 355 ~~~V~lvd~~~~~I~~it--~~----gv~~~d---------------G-~~~~D~iI~ATGf~~~ 397 (549)
T 4ap3_A 355 RDNVELVDLRSTPIVGMD--ET----GIVTTG---------------A-HYDLDMIVLATGFDAM 397 (549)
T ss_dssp STTEEEEETTTSCEEEEE--TT----EEEESS---------------C-EEECSEEEECCCEEES
T ss_pred CCCEEEEeCCCCCceEEe--CC----cEEeCC---------------C-ceecCEEEECCccccc
Confidence 4478887 236777764 22 678776 7 8999999999998654
No 253
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=83.73 E-value=2.9 Score=33.69 Aligned_cols=47 Identities=11% Similarity=0.173 Sum_probs=32.1
Q ss_pred CCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeec
Q psy9487 31 MGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEG 88 (101)
Q Consensus 31 ~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G 88 (101)
.+++|+++++|++|.++ ++.+ .|.+.+. .++. .+..+.||.||+|..
T Consensus 409 ~~l~I~l~~~V~~I~~~-~~~v-~V~~~~~---~~~~------~~~~~~Ad~VI~tvP 455 (662)
T 2z3y_A 409 EGLDIKLNTAVRQVRYT-ASGC-EVIAVNT---RSTS------QTFIYKCDAVLCTLP 455 (662)
T ss_dssp TTCEEETTEEEEEEEEE-TTEE-EEEEEES---SCTT------CEEEEEESEEEECCC
T ss_pred hcCceecCCeEEEEEEC-CCcE-EEEEeec---ccCC------CCeEEEeCEEEECCC
Confidence 47899999999999996 4433 3555431 1111 136799999999965
No 254
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=82.43 E-value=5.4 Score=30.01 Aligned_cols=59 Identities=19% Similarity=0.274 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCC
Q psy9487 20 VVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 90 (101)
Q Consensus 20 ~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~ 90 (101)
+...+.+..++.||++++++.++++. .+.+. +...+ .+|+. ..+.++.+|.||+|.|..
T Consensus 210 ~~~~~~~~l~~~gI~~~~~~~v~~v~---~~~v~-~~~~~----~~g~~----~~~~~i~~D~vv~~~g~~ 268 (437)
T 3sx6_A 210 SKGILTKGLKEEGIEAYTNCKVTKVE---DNKMY-VTQVD----EKGET----IKEMVLPVKFGMMIPAFK 268 (437)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEE---TTEEE-EEEEC----TTSCE----EEEEEEECSEEEEECCEE
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEEEE---CCeEE-EEecc----cCCcc----ccceEEEEeEEEEcCCCc
Confidence 45667788889999999999999984 23222 22111 12210 013689999999998743
No 255
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=82.24 E-value=0.77 Score=37.56 Aligned_cols=67 Identities=12% Similarity=-0.049 Sum_probs=38.8
Q ss_pred HHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCC--C--CCCcCCCCC--eEEEccEEEEeecCCch
Q psy9487 22 KWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKD--G--SPKDTFARG--MELHAKVTIFAEGCHGH 92 (101)
Q Consensus 22 ~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~--g--~~~~~~~~g--~~i~A~~VI~A~G~~s~ 92 (101)
..+.+..++.||++++++.++++.- + .+. +.....+.... + ...+.+.++ .++.+|.||+|.|....
T Consensus 575 ~~~~~~l~~~GV~i~~~~~v~~i~~--~-~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~ 647 (729)
T 1o94_A 575 PNMMRRLHELHVEELGDHFCSRIEP--G-RME-IYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSE 647 (729)
T ss_dssp HHHHHHHHHTTCEEECSEEEEEEET--T-EEE-EEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEEC
T ss_pred HHHHHHHHhCCCEEEcCcEEEEEEC--C-eEE-EEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCC
Confidence 4566777899999999999999852 2 222 22211010000 0 001122222 34999999999997654
No 256
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=81.20 E-value=0.82 Score=34.47 Aligned_cols=48 Identities=13% Similarity=0.126 Sum_probs=33.8
Q ss_pred HHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 25 GEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 25 ~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
.+.+++.|++++.+ .|+.+..+ ++ .|.+.+ +.++.++.+|+|+|+...
T Consensus 63 ~~~~~~~gv~~~~~-~v~~id~~--~~--~v~~~~---------------g~~i~~d~liiAtG~~~~ 110 (430)
T 3h28_A 63 APLLPKFNIEFINE-KAESIDPD--AN--TVTTQS---------------GKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp TTTGGGGTEEEECS-CEEEEETT--TT--EEEETT---------------CCEEECSEEEECCCCEEE
T ss_pred HHHHHhcCCEEEEE-EEEEEECC--CC--EEEECC---------------CcEEECCEEEEcCCcccc
Confidence 34556789999975 88887643 33 244543 457999999999998743
No 257
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=80.77 E-value=6.1 Score=30.01 Aligned_cols=46 Identities=11% Similarity=0.221 Sum_probs=32.0
Q ss_pred HHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 24 LGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 24 l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
+.+.+++.|++++.++.+. .+ +. .|.+.+ .++.++.+|+|+|+...
T Consensus 102 ~~~~~~~~gv~~~~g~~~~---~~-~~---~v~v~~----------------~~~~~d~lviATGs~p~ 147 (458)
T 1lvl_A 102 VAALLKKHGVKVVHGWAKV---LD-GK---QVEVDG----------------QRIQCEHLLLATGSSSV 147 (458)
T ss_dssp HHHHHHHTTCEEECSCEEE---EE-TT---EEEETT----------------EEEECSEEEECCCEEEC
T ss_pred HHHHHHhCCcEEEEEEEEE---cc-CC---EEEEee----------------EEEEeCEEEEeCCCCCC
Confidence 3456678999999998654 23 32 244432 47999999999998653
No 258
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=80.62 E-value=2.5 Score=31.43 Aligned_cols=47 Identities=11% Similarity=0.157 Sum_probs=34.8
Q ss_pred HHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 25 GEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 25 ~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
.+..++.|++++. ++|+.+..+ ++ .|.+.+ +.++.++.+|+|+|+..
T Consensus 64 ~~~~~~~~i~~~~-~~v~~id~~--~~--~v~~~~---------------g~~~~~d~lvlAtG~~p 110 (404)
T 3fg2_P 64 EKFFQDQAIELIS-DRMVSIDRE--GR--KLLLAS---------------GTAIEYGHLVLATGARN 110 (404)
T ss_dssp HHHHHHTTEEEEC-CCEEEEETT--TT--EEEESS---------------SCEEECSEEEECCCEEE
T ss_pred HHHHHhCCCEEEE-EEEEEEECC--CC--EEEECC---------------CCEEECCEEEEeeCCCc
Confidence 4455678999999 999998653 33 245543 46899999999999743
No 259
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=80.52 E-value=1.5 Score=33.99 Aligned_cols=54 Identities=11% Similarity=0.053 Sum_probs=35.8
Q ss_pred hHHHHHHHHHHHHHCCCEEecC--CceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 17 LGHVVKWLGEQAEAMGVEIYPG--IPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 17 r~~~d~~l~~~A~~~Gv~i~~g--t~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
...+-+.|++...+. +|+++ ++|++|..+ +++ |.+.+ |.++.|+.||.|..++.
T Consensus 215 ~~~l~~~la~~l~~~--~i~~~~~~~V~~I~~~-~~~---v~~~~---------------G~~~~ad~VI~a~p~~~ 270 (484)
T 4dsg_A 215 TGIIYQAIKEKLPSE--KLTFNSGFQAIAIDAD-AKT---ITFSN---------------GEVVSYDYLISTVPFDN 270 (484)
T ss_dssp THHHHHHHHHHSCGG--GEEECGGGCEEEEETT-TTE---EEETT---------------SCEEECSEEEECSCHHH
T ss_pred HHHHHHHHHhhhhhC--eEEECCCceeEEEEec-CCE---EEECC---------------CCEEECCEEEECCCHHH
Confidence 445555555544332 88999 469999874 453 44443 46799999999976543
No 260
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=79.78 E-value=5.5 Score=30.46 Aligned_cols=50 Identities=18% Similarity=0.130 Sum_probs=30.8
Q ss_pred HHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 25 GEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 25 ~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
....++.|++++.+.. . +- +...+.|.+.+ |+ ..++.++.+|+|+|+...
T Consensus 111 ~~~~~~~~V~~i~g~~-~---~~-~~~~v~v~~~~------g~-------~~~~~~d~lViATGs~p~ 160 (488)
T 3dgz_A 111 RVQLQDRKVKYFNIKA-S---FV-DEHTVRGVDKG------GK-------ATLLSAEHIVIATGGRPR 160 (488)
T ss_dssp HHHHHHTTCEEECCEE-E---ES-SSSEEEEECTT------SC-------EEEEEEEEEEECCCEEEC
T ss_pred HHHHHhCCCEEEEEEE-E---Ec-cCCeEEEEeCC------Cc-------eEEEECCEEEEcCCCCCC
Confidence 3455678999987742 2 21 23333354432 21 157999999999997654
No 261
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=79.55 E-value=5.9 Score=30.26 Aligned_cols=51 Identities=14% Similarity=0.124 Sum_probs=32.4
Q ss_pred HHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 23 WLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 23 ~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
.+....++.|++++.++... . +...+.|.+.+ |+ ..++.++.+|+|+|+..
T Consensus 120 ~~~~~~~~~~v~~~~g~~~~---~--~~~~~~v~~~~------g~-------~~~~~~d~lViATGs~p 170 (491)
T 3urh_A 120 GVSFLFKKNKIDGFQGTGKV---L--GQGKVSVTNEK------GE-------EQVLEAKNVVIATGSDV 170 (491)
T ss_dssp HHHHHHHHTTCEEEESEEEE---C--SSSEEEEECTT------SC-------EEEEECSEEEECCCEEC
T ss_pred HHHHHHHhCCCEEEEEEEEE---e--cCCEEEEEeCC------Cc-------eEEEEeCEEEEccCCCC
Confidence 34455677899999886432 2 23333355432 21 15799999999999753
No 262
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=79.30 E-value=3.3 Score=35.09 Aligned_cols=70 Identities=11% Similarity=0.081 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHC-CCEEecCCceeEEEEecCCcEEEEEeccccccCCCCC-CcCCCCCeEEEccEEEEeecCCc
Q psy9487 19 HVVKWLGEQAEAM-GVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSP-KDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 19 ~~d~~l~~~A~~~-Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~-~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
.+...+.++..+. +++++.++.|.++.. ++.+..+........-.... .+ -..+..+.++.+|+|+|+..
T Consensus 182 ~~~~~~~~~l~~~~~v~~~~~~~V~~i~~--~~~~~~v~~~~~~~~v~~~~~~~-~~~~~~i~~d~lVlATGs~p 253 (965)
T 2gag_A 182 AWIEQVTSELAEAEETTHLQRTTVFGSYD--ANYLIAAQRRTVHLDGPSGPGVS-RERIWHIRAKQVVLATGAHE 253 (965)
T ss_dssp HHHHHHHHHHHHSTTEEEESSEEEEEEET--TTEEEEEEECSTTCSSCCCTTCC-SEEEEEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHhhcCCcEEEeCCEEEeeec--CCceeeeEeecccccccccccCC-CCceEEEECCEEEECCCCcc
Confidence 4445556677775 999999999998853 45555554321000000000 00 00124799999999999854
No 263
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=79.23 E-value=4.8 Score=33.97 Aligned_cols=46 Identities=11% Similarity=0.179 Sum_probs=31.4
Q ss_pred CCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeec
Q psy9487 32 GVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEG 88 (101)
Q Consensus 32 Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G 88 (101)
+++|+++++|++|.++ ++.| .|.+.+. +++.. +..+.||.||+|.-
T Consensus 581 ~l~I~Lnt~V~~I~~~-~~gV-~V~~~~~---~~~~~------g~~i~AD~VIvTvP 626 (852)
T 2xag_A 581 GLDIKLNTAVRQVRYT-ASGC-EVIAVNT---RSTSQ------TFIYKCDAVLCTLP 626 (852)
T ss_dssp TCCEECSEEEEEEEEE-TTEE-EEEEEES---SSTTC------EEEEEESEEEECCC
T ss_pred CCCEEeCCeEEEEEEc-CCcE-EEEEeec---ccCCC------CeEEECCEEEECCC
Confidence 6789999999999996 4443 3555431 11111 36899999999953
No 264
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=78.50 E-value=4 Score=31.07 Aligned_cols=52 Identities=17% Similarity=0.150 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 20 VVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 20 ~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
+..++....++.|++++.++. ..+ + ... ..|... +.++.++.+|+|+|+...
T Consensus 110 ~~~~~~~~~~~~gv~~~~g~~-~~~--~-~~~-~~v~~~----------------g~~~~~d~lviAtG~~p~ 161 (478)
T 3dk9_A 110 LNAIYQNNLTKSHIEIIRGHA-AFT--S-DPK-PTIEVS----------------GKKYTAPHILIATGGMPS 161 (478)
T ss_dssp HHHHHHHHHHHTTCEEEESCE-EEC--S-CSS-CEEEET----------------TEEEECSCEEECCCEEEC
T ss_pred HHHHHHHHHHhCCcEEEEeEE-EEe--e-CCe-EEEEEC----------------CEEEEeeEEEEccCCCCC
Confidence 445566677889999998853 222 1 222 123332 367999999999997543
No 265
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=78.18 E-value=4.1 Score=31.38 Aligned_cols=53 Identities=9% Similarity=0.119 Sum_probs=31.7
Q ss_pred HHHHHHHHC-CCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCC---eEEEccEEEEeecCCch
Q psy9487 23 WLGEQAEAM-GVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARG---MELHAKVTIFAEGCHGH 92 (101)
Q Consensus 23 ~l~~~A~~~-Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g---~~i~A~~VI~A~G~~s~ 92 (101)
++.+..++. |++++.++ ++.+ + ... +.+...+ +.+ | .++.++.+|+|+|+...
T Consensus 108 ~~~~~l~~~~gv~~~~g~-~~~i--~-~~~-v~v~~~~---~~~---------g~~~~~~~~d~lviAtGs~p~ 164 (490)
T 1fec_A 108 SYEGMFADTEGLTFHQGF-GALQ--D-NHT-VLVRESA---DPN---------SAVLETLDTEYILLATGSWPQ 164 (490)
T ss_dssp HHHHHHHTSTTEEEEESE-EEEE--E-TTE-EEEESSS---STT---------SCEEEEEEEEEEEECCCEEEC
T ss_pred HHHHHHhcCCCcEEEEeE-EEEe--e-CCE-EEEEeec---cCC---------CCceEEEEcCEEEEeCCCCCC
Confidence 344455677 99999986 4443 3 332 2233210 001 3 57999999999997643
No 266
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=77.97 E-value=5.3 Score=31.03 Aligned_cols=49 Identities=10% Similarity=-0.050 Sum_probs=30.2
Q ss_pred HHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 26 EQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 26 ~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
...++.|++++.+. +.- .+ ... +.|...+ |+ ..++.++.+|+|+|+...
T Consensus 138 ~~~~~~gV~~i~g~-a~~--~d-~~~-v~v~~~~------g~-------~~~i~~d~lViATGs~p~ 186 (519)
T 3qfa_A 138 VALREKKVVYENAY-GQF--IG-PHR-IKATNNK------GK-------EKIYSAERFLIATGERPR 186 (519)
T ss_dssp HHHHHTTCEEECSE-EEE--EE-TTE-EEEECTT------CC-------CCEEEEEEEEECCCEEEC
T ss_pred HHHHhCCCEEEEEE-EEE--ee-CCE-EEEEcCC------CC-------EEEEECCEEEEECCCCcC
Confidence 34567899999875 222 22 222 3344322 22 147999999999997654
No 267
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=77.72 E-value=6 Score=30.14 Aligned_cols=48 Identities=21% Similarity=0.284 Sum_probs=32.1
Q ss_pred HHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 22 KWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 22 ~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
.++.+..++.|++++.++. ..+ + ... |.+ + +.++.++.+|+|+|++..
T Consensus 96 ~~~~~~~~~~gv~~~~g~~-~~i--~-~~~---v~~-~---------------g~~~~~d~lviAtGs~p~ 143 (463)
T 2r9z_A 96 SFWDGYVERLGITRVDGHA-RFV--D-AHT---IEV-E---------------GQRLSADHIVIATGGRPI 143 (463)
T ss_dssp HHHHHHHHHTTCEEEESCE-EEE--E-TTE---EEE-T---------------TEEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHCCCEEEEeEE-EEc--c-CCE---EEE-C---------------CEEEEcCEEEECCCCCCC
Confidence 3445556788999999854 322 3 222 344 3 367999999999998653
No 268
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=77.12 E-value=4.4 Score=29.77 Aligned_cols=45 Identities=18% Similarity=0.207 Sum_probs=31.9
Q ss_pred HHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 27 QAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 27 ~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
...+.|++++.+ +|+.|..+ .+. |.+.+ |.++..|.+|+|+|+..
T Consensus 64 ~~~~~gv~~i~~-~v~~id~~--~~~--v~~~~---------------g~~i~yd~LviAtG~~~ 108 (401)
T 3vrd_B 64 GLRAHGIQVVHD-SALGIDPD--KKL--VKTAG---------------GAEFAYDRCVVAPGIDL 108 (401)
T ss_dssp HHHHTTCEEECS-CEEEEETT--TTE--EEETT---------------SCEEECSEEEECCCEEE
T ss_pred HHHHCCCEEEEe-EEEEEEcc--CcE--EEecc---------------cceeecceeeeccCCcc
Confidence 445679999886 67777553 332 34443 56899999999999753
No 269
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=76.75 E-value=0.77 Score=34.56 Aligned_cols=26 Identities=19% Similarity=0.382 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEE
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEV 44 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i 44 (101)
.+.+++.+..++.|+++++++.+.++
T Consensus 189 ~~~~~~~~~l~~~gV~~~~~~~v~~i 214 (385)
T 3klj_A 189 DGGLFLKDKLDRLGIKIYTNSNFEEM 214 (385)
T ss_dssp HHHHHHHHHHHTTTCEEECSCCGGGC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEc
Confidence 45667788888999999999888776
No 270
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=76.19 E-value=5.9 Score=31.46 Aligned_cols=53 Identities=13% Similarity=0.203 Sum_probs=32.1
Q ss_pred HHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 25 GEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 25 ~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
....++.||+++.+.. .+ .+ ... +.|...+ ..+. +.++.|+.+|+|+|+...+
T Consensus 147 ~~~l~~~~V~~i~G~a--~f-~~-~~~-v~V~~~~----~~~~-------~~~i~a~~iiIATGs~P~~ 199 (542)
T 4b1b_A 147 MTGLRSSKVKYINGLA--KL-KD-KNT-VSYYLKG----DLSK-------EETVTGKYILIATGCRPHI 199 (542)
T ss_dssp HHHHHHTTCEEECEEE--EE-EE-TTE-EEEEEC------CCC-------EEEEEEEEEEECCCEEECC
T ss_pred HHHHHhCCCEEEeeeE--EE-cC-CCc-ceEeecc----cCCc-------eEEEeeeeEEeccCCCCCC
Confidence 4445778999998753 22 22 233 3344332 1111 3689999999999987654
No 271
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=75.36 E-value=6.4 Score=30.00 Aligned_cols=48 Identities=15% Similarity=0.119 Sum_probs=30.0
Q ss_pred HHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 26 EQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 26 ~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
...++.|++++.+... ..+ .. .+.|.+.+ | ..++.++.+|+|+|+...
T Consensus 116 ~~~~~~~v~~~~g~a~---~~~-~~-~v~v~~~~------g--------~~~~~~d~lviATGs~p~ 163 (483)
T 3dgh_A 116 VDLRDKKVEYINGLGS---FVD-SH-TLLAKLKS------G--------ERTITAQTFVIAVGGRPR 163 (483)
T ss_dssp HHHHHTTCEEECSEEE---EEE-TT-EEEEECTT------C--------CEEEEEEEEEECCCEEEC
T ss_pred HHHHhCCCEEEEeEEE---Ecc-CC-EEEEEeCC------C--------eEEEEcCEEEEeCCCCcC
Confidence 3456789999987542 222 22 23354432 1 147999999999997544
No 272
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=75.25 E-value=3 Score=32.61 Aligned_cols=44 Identities=16% Similarity=0.253 Sum_probs=29.4
Q ss_pred HHHHCCCEEe--cCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 27 QAEAMGVEIY--PGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 27 ~A~~~Gv~i~--~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
...+-+|+++ .++.+.++. + .||.+.+ .++.+|+||.|+|....
T Consensus 347 ~~~~~~v~lv~~~~~~i~~i~--~----~gv~~~d----------------~~~~~D~ii~atG~~~~ 392 (542)
T 1w4x_A 347 MFNRDNVHLVDTLSAPIETIT--P----RGVRTSE----------------REYELDSLVLATGFDAL 392 (542)
T ss_dssp HTTSTTEEEEETTTSCEEEEC--S----SEEEESS----------------CEEECSEEEECCCCCCT
T ss_pred HhCCCCEEEEecCCCCceEEc--C----CeEEeCC----------------eEEecCEEEEcCCcccc
Confidence 3334457776 355677663 2 2566654 47999999999999863
No 273
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=75.06 E-value=8.3 Score=29.17 Aligned_cols=47 Identities=15% Similarity=0.206 Sum_probs=31.4
Q ss_pred HHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 22 KWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 22 ~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
..+....++.|++++.++. ..+ + ... |.+ + +.++.++.+|+|+|+..
T Consensus 97 ~~~~~~~~~~~v~~~~g~~-~~i--~-~~~---v~~-~---------------g~~~~~d~lviAtGs~p 143 (450)
T 1ges_A 97 TSYENVLGKNNVDVIKGFA-RFV--D-AKT---LEV-N---------------GETITADHILIATGGRP 143 (450)
T ss_dssp HHHHHHHHHTTCEEEESCC-EEE--E-TTE---EEE-T---------------TEEEEEEEEEECCCEEE
T ss_pred HHHHHHHHhCCCEEEEeEE-EEe--c-CCE---EEE-C---------------CEEEEeCEEEECCCCCC
Confidence 3344556778999999864 322 3 222 334 3 36799999999999754
No 274
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=74.68 E-value=4.4 Score=30.75 Aligned_cols=50 Identities=22% Similarity=0.303 Sum_probs=31.7
Q ss_pred HHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 25 GEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 25 ~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
....++.|++++.++.+. .+ ... +.|...+ |+ ..++.++.+|+|+|+...
T Consensus 106 ~~~~~~~~v~~~~g~~~~---~~-~~~-~~v~~~~------g~-------~~~~~~d~lvlAtG~~p~ 155 (476)
T 3lad_A 106 ASLIKANGVTLFEGHGKL---LA-GKK-VEVTAAD------GS-------SQVLDTENVILASGSKPV 155 (476)
T ss_dssp HHHHHHHTCEEEESEEEE---CS-TTC-EEEECTT------SC-------EEEECCSCEEECCCEEEC
T ss_pred HHHHHhCCCEEEEeEEEE---ec-CCE-EEEEcCC------Cc-------eEEEEcCEEEEcCCCCCC
Confidence 345567899999886433 32 333 3354432 21 157999999999998643
No 275
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=74.35 E-value=7.2 Score=27.44 Aligned_cols=57 Identities=23% Similarity=0.053 Sum_probs=38.9
Q ss_pred EhHHHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 16 RLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 16 ~r~~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
.-..+.........+.+..+..+..+...... +.. -+.. + +.++.++.+|+|+|+..
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~-~---------------~~~~~~d~liiAtGs~~ 116 (312)
T 4gcm_A 60 TGPDLSTKMFEHAKKFGAVYQYGDIKSVEDKG-EYK--VINF-G---------------NKELTAKAVIIATGAEY 116 (312)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEECCCCEEEECS-SCE--EEEC-S---------------SCEEEEEEEEECCCEEE
T ss_pred chHHHHHHHHHHHhhccccccceeeeeeeeee-cce--eecc-C---------------CeEEEeceeEEcccCcc
Confidence 34566667778888889988888766665442 222 1222 1 36899999999999754
No 276
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=73.86 E-value=14 Score=25.74 Aligned_cols=57 Identities=11% Similarity=0.033 Sum_probs=40.1
Q ss_pred HHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 25 GEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 25 ~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
.+.....+.+.+..+...++... +....+++..+. ..++ +.++.+|.||+|.|....
T Consensus 195 ~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~---~~~~-------~~~i~~d~vi~a~G~~pn 251 (314)
T 4a5l_A 195 ERVLNHPKIEVIWNSELVELEGD-GDLLNGAKIHNL---VSGE-------YKVVPVAGLFYAIGHSPN 251 (314)
T ss_dssp HHHHTCTTEEEECSEEEEEEEES-SSSEEEEEEEET---TTCC-------EEEEECSEEEECSCEEES
T ss_pred hhhhcccceeeEeeeeeEEEEee-eeccceeEEeec---cccc-------ceeeccccceEecccccC
Confidence 34456678888888888888764 567777776541 1222 478999999999997543
No 277
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=73.84 E-value=3.6 Score=31.19 Aligned_cols=48 Identities=15% Similarity=0.108 Sum_probs=29.9
Q ss_pred HHHHHC-CCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 26 EQAEAM-GVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 26 ~~A~~~-Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
+..++. |++++.++ +..+ + .+. ..|.+.+ |+ ..++.++.+|+|+|+..
T Consensus 102 ~~~~~~~~v~~~~g~-~~~~--~-~~~-~~v~~~~------g~-------~~~~~~d~lviAtGs~p 150 (467)
T 1zk7_A 102 GILGGNPAITVVHGE-ARFK--D-DQS-LTVRLNE------GG-------ERVVMFDRCLVATGASP 150 (467)
T ss_dssp HHHTTCTTEEEEEEE-EEEE--E-TTE-EEEEETT------SS-------EEEEECSEEEECCCEEE
T ss_pred HHHhccCCeEEEEEE-EEEc--c-CCE-EEEEeCC------Cc-------eEEEEeCEEEEeCCCCC
Confidence 344556 99999874 4433 2 232 3355533 11 15799999999999753
No 278
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=72.26 E-value=8.3 Score=29.42 Aligned_cols=52 Identities=19% Similarity=0.208 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEec-cccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATG-DVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~-~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
.+..++....++.|++++.+. +..+ + .. .|.+. + +..+.++.+|+|+|+...
T Consensus 115 ~~~~~~~~~~~~~~v~~~~g~-~~~i--~-~~---~v~v~~~---------------~~~~~~d~lviAtG~~p~ 167 (484)
T 3o0h_A 115 RLEGLYREGLQNSNVHIYESR-AVFV--D-EH---TLELSVT---------------GERISAEKILIATGAKIV 167 (484)
T ss_dssp HHHHHHHHHHHHTTCEEEESC-EEEE--E-TT---EEEETTT---------------CCEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHHHhCCCEEEEeE-EEEe--e-CC---EEEEecC---------------CeEEEeCEEEEccCCCcc
Confidence 445566777888999999883 3333 2 22 23332 2 367999999999997654
No 279
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=70.07 E-value=4.6 Score=31.12 Aligned_cols=60 Identities=12% Similarity=0.096 Sum_probs=27.9
Q ss_pred HHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccc--cc-cCCCCCCcCCCCCeEEEccEEEEeecCCchh
Q psy9487 22 KWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDV--GI-AKDGSPKDTFARGMELHAKVTIFAEGCHGHL 93 (101)
Q Consensus 22 ~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~--g~-~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~l 93 (101)
..+.+.+++.|++++.++.+ .+ + ...+ .+...+. +. ..++. +.++.++.+|+|+|+...+
T Consensus 93 ~~~~~~~~~~gv~~~~g~~~-~i--d-~~~v-~v~~~~~~~~~~~~~~~-------~~~~~~d~lViAtGs~p~~ 155 (500)
T 1onf_A 93 NIYRQNLSKDKVDLYEGTAS-FL--S-ENRI-LIKGTKDNNNKDNGPLN-------EEILEGRNILIAVGNKPVF 155 (500)
T ss_dssp HHHHHHHHHTTCEEEESCCC-CC-------------------------------------CBSSEEECCCCCBCC
T ss_pred HHHHHHHHhCCCEEEEeEEE-Ee--e-CCEE-EEEeccccccccccCCC-------ceEEEeCEEEECCCCCCCC
Confidence 34556667899999998653 22 2 2222 1221000 00 00000 3579999999999987543
No 280
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=69.51 E-value=7.2 Score=30.05 Aligned_cols=54 Identities=17% Similarity=0.219 Sum_probs=30.5
Q ss_pred HHHHHHHC-CCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 24 LGEQAEAM-GVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 24 l~~~A~~~-Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
+....++. |++++.++ ++.+ + ... |.+.+. .+.++ ..+.++.++.+|+|+|+..
T Consensus 113 ~~~~l~~~~gv~~~~g~-~~~i--~-~~~---v~v~~~---~~~~~----~~~~~~~~d~lViATGs~p 167 (495)
T 2wpf_A 113 YEGMFNDTEGLDFFLGW-GSLE--S-KNV---VVVRET---ADPKS----AVKERLQADHILLATGSWP 167 (495)
T ss_dssp HHHHHHHCTTEEEEESE-EEEE--E-TTE---EEEESS---SSTTS----CEEEEEEEEEEEECCCEEE
T ss_pred HHHHHhcCCCeEEEEeE-EEEe--e-CCE---EEEeec---CCccC----CCCeEEEcCEEEEeCCCCc
Confidence 34445677 99999986 4433 3 332 333210 00000 0025799999999999864
No 281
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=67.73 E-value=9.8 Score=28.79 Aligned_cols=53 Identities=17% Similarity=0.151 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCch
Q psy9487 19 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 19 ~~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s~ 92 (101)
.+..++.+..++.|++++.+ .+..+ +.. .|.+.+ + +.++.++.+|+|+|+...
T Consensus 94 ~~~~~~~~~~~~~gv~~~~g-~~~~i----~~~--~v~~~~-----~---------~~~~~~d~lviAtG~~p~ 146 (463)
T 4dna_A 94 RLEGLYRKGLANAGAEILDT-RAELA----GPN--TVKLLA-----S---------GKTVTAERIVIAVGGHPS 146 (463)
T ss_dssp HHHHHHHHHHHHHTCEEEES-CEEES----SSS--EEEETT-----T---------TEEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHHHhCCCEEEEE-EEEEe----eCC--EEEEec-----C---------CeEEEeCEEEEecCCCcc
Confidence 45556677778889999998 33332 222 234411 0 468999999999997654
No 282
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=67.35 E-value=9.3 Score=29.58 Aligned_cols=23 Identities=13% Similarity=0.153 Sum_probs=17.9
Q ss_pred CCCeEEEccEEEEeecCCchhhH
Q psy9487 73 ARGMELHAKVTIFAEGCHGHLTK 95 (101)
Q Consensus 73 ~~g~~i~A~~VI~A~G~~s~l~~ 95 (101)
..|.++.+|+||+|||.....-.
T Consensus 391 ~dg~~~~~D~VI~ATGy~~~~p~ 413 (501)
T 4b63_A 391 DVKETLEVDALMVATGYNRNAHE 413 (501)
T ss_dssp -CCCEEEESEEEECCCEECCTHH
T ss_pred CCCeEEECCEEEECcCCCCCCcc
Confidence 34678999999999998766543
No 283
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=64.82 E-value=7.2 Score=32.43 Aligned_cols=57 Identities=9% Similarity=-0.088 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHCCCEEecCCcee--EEEEecCCc-----EEEEEeccccccCCCCCCcCCCCCeEEEccEEEEee
Q psy9487 18 GHVVKWLGEQAEAMGVEIYPGIPAS--EVLYHGDGS-----VKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAE 87 (101)
Q Consensus 18 ~~~d~~l~~~A~~~Gv~i~~gt~v~--~i~~~~~g~-----v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~ 87 (101)
..|-+.|+++..+ |..|.++++|+ +|..++++. -+.|.... +|+. ..+.||.||+|.
T Consensus 347 ~~L~~aLa~~l~~-g~~I~l~~~V~~~~I~~~~~g~~~~~~~V~V~~~~-----~G~~-------~~~~aD~VIvTv 410 (721)
T 3ayj_A 347 VEFIRNLFLKAQN-VGAGKLVVQVRQERVANACHSGTASARAQLLSYDS-----HNAV-------HSEAYDFVILAV 410 (721)
T ss_dssp HHHHHHHHHHHHH-HTTTSEEEEEECEEEEEEEECSSSSCCEEEEEEET-----TCCE-------EEEEESEEEECS
T ss_pred HHHHHHHHHhccc-CCceEeCCEEEeeeEEECCCCCccccceEEEEEec-----CCce-------EEEEcCEEEECC
Confidence 4566666766543 56678889999 998753331 23343321 2221 379999999974
No 284
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=62.31 E-value=7 Score=27.48 Aligned_cols=18 Identities=22% Similarity=0.314 Sum_probs=15.6
Q ss_pred CeEEEccEEEEeecCCch
Q psy9487 75 GMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 75 g~~i~A~~VI~A~G~~s~ 92 (101)
|.++.+|.||.|.|....
T Consensus 269 g~~i~~D~vi~a~G~~p~ 286 (357)
T 4a9w_A 269 GTERAFDAVIWCTGFRPA 286 (357)
T ss_dssp SCEEECSEEEECCCBCCC
T ss_pred CCEecCCEEEECCCcCCC
Confidence 578999999999998665
No 285
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=60.08 E-value=1.8 Score=33.43 Aligned_cols=46 Identities=15% Similarity=0.150 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 20 VVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 20 ~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
+-.++.+.+++.|++|++++.+.. . |.+.+ ..+.++.||+|+|++.
T Consensus 174 ~~~~~~~~l~~~gv~~~~~~~v~~-------~---v~~~~----------------~~~~~d~vvlAtG~~~ 219 (456)
T 2vdc_G 174 VVERRVKLLADAGVIYHPNFEVGR-------D---ASLPE----------------LRRKHVAVLVATGVYK 219 (456)
T ss_dssp HHHHHHHHHHHTTCEEETTCCBTT-------T---BCHHH----------------HHSSCSEEEECCCCCE
T ss_pred HHHHHHHHHHHCCcEEEeCCEecc-------E---EEhhH----------------hHhhCCEEEEecCCCC
Confidence 334457788899999999987531 0 22221 2256899999999974
No 286
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=59.31 E-value=27 Score=27.30 Aligned_cols=17 Identities=18% Similarity=0.227 Sum_probs=14.1
Q ss_pred eEEEccEEEEeecCCch
Q psy9487 76 MELHAKVTIFAEGCHGH 92 (101)
Q Consensus 76 ~~i~A~~VI~A~G~~s~ 92 (101)
.++.++.||+|+|+...
T Consensus 246 ~~~~~d~lviAtGs~p~ 262 (598)
T 2x8g_A 246 STITGNKIILATGERPK 262 (598)
T ss_dssp EEEEEEEEEECCCEEEC
T ss_pred EEEEeCEEEEeCCCCCC
Confidence 47999999999997543
No 287
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=52.03 E-value=21 Score=27.16 Aligned_cols=18 Identities=22% Similarity=0.339 Sum_probs=15.5
Q ss_pred CeEEEccEEEEeecCCch
Q psy9487 75 GMELHAKVTIFAEGCHGH 92 (101)
Q Consensus 75 g~~i~A~~VI~A~G~~s~ 92 (101)
|.++.+|.||.|+|....
T Consensus 260 G~~i~~D~Vi~atG~~p~ 277 (464)
T 2xve_A 260 GSSEKVDAIILCTGYIHH 277 (464)
T ss_dssp SCEEECSEEEECCCBCCC
T ss_pred CCEEeCCEEEECCCCCCC
Confidence 678999999999997754
No 288
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=47.24 E-value=2.7 Score=35.83 Aligned_cols=47 Identities=28% Similarity=0.237 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCC
Q psy9487 20 VVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCH 90 (101)
Q Consensus 20 ~d~~l~~~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~ 90 (101)
+.+|..+..++.|+++++++.+.. .. |.+.+ +.++.+|.||+|+|++
T Consensus 240 ~~~~~~~~~~~~gv~~~~~~~v~~------~~---v~~~~---------------~~~~~~d~vvlAtGa~ 286 (1025)
T 1gte_A 240 VVNFEIELMKDLGVKIICGKSLSE------NE---ITLNT---------------LKEEGYKAAFIGIGLP 286 (1025)
T ss_dssp HHHHHHHHHHTTTCEEEESCCBST------TS---BCHHH---------------HHHTTCCEEEECCCCC
T ss_pred HHHHHHHHHHHCCcEEEcccEecc------ce---EEhhh---------------cCccCCCEEEEecCCC
Confidence 445667888999999999987632 11 22222 2346789999999985
No 289
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=45.20 E-value=28 Score=26.82 Aligned_cols=41 Identities=24% Similarity=0.362 Sum_probs=28.2
Q ss_pred HHCCCEEecCCceeEEEEecCCcEEEEEeccccccCCCCCCcCCCCCeEEEccEEEEeecCCc
Q psy9487 29 EAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPKDTFARGMELHAKVTIFAEGCHG 91 (101)
Q Consensus 29 ~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~~g~~~~g~~~~~~~~g~~i~A~~VI~A~G~~s 91 (101)
++.|+++++...++.+ + ... |.+. +.++.++.+|+|+|+..
T Consensus 146 ~~~gv~~~~~~~v~~i--~-~~~---v~~~----------------g~~~~~d~lViATGs~p 186 (523)
T 1mo9_A 146 EQLNLEYILNCPAKVI--D-NHT---VEAA----------------GKVFKAKNLILAVGAGP 186 (523)
T ss_dssp HTSCCCEEESSCCEEE--E-TTE---EEET----------------TEEEEBSCEEECCCEEC
T ss_pred ccCCcEEEEeeEEEEe--e-CCE---EEEC----------------CEEEEeCEEEECCCCCC
Confidence 7789999955566654 2 222 3332 25799999999999754
No 290
>2jz7_A Selenium binding protein; NMR {Methanococcus vannielii}
Probab=41.09 E-value=10 Score=23.23 Aligned_cols=28 Identities=18% Similarity=0.092 Sum_probs=22.6
Q ss_pred cEEEEhHHHHHHHHHHHHHCCCEEecCC
Q psy9487 12 NYVVRLGHVVKWLGEQAEAMGVEIYPGI 39 (101)
Q Consensus 12 ~~~v~r~~~d~~l~~~A~~~Gv~i~~gt 39 (101)
|.++.|....+-|.++|+++|++-+.+.
T Consensus 28 G~~vaR~~A~~rm~e~A~~lGAnAVVgv 55 (81)
T 2jz7_A 28 TISDNVDEIVENLRKQVKAKGGMGLIAF 55 (81)
T ss_dssp CCCSSHHHHHHHHHHHHHHTTCCEEECC
T ss_pred EEEehHHHHHHHHHHHHHHcCCCEEEEE
Confidence 5566899999999999999997755544
No 291
>2o35_A Hypothetical protein DUF1244; helix bundle, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.12A {Sinorhizobium meliloti} SCOP: a.293.1.1
Probab=28.95 E-value=34 Score=21.85 Aligned_cols=19 Identities=37% Similarity=0.599 Sum_probs=16.8
Q ss_pred hHHHHHHHHHHHHHCCCEE
Q psy9487 17 LGHVVKWLGEQAEAMGVEI 35 (101)
Q Consensus 17 r~~~d~~l~~~A~~~Gv~i 35 (101)
|.=|.+|+.+.|.+.|+++
T Consensus 45 RNCLskWy~~aA~e~G~~~ 63 (105)
T 2o35_A 45 RNCLSNWYREAAEASGVPM 63 (105)
T ss_dssp HHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHcCCcC
Confidence 6678899999999999876
No 292
>1u07_A TONB protein; beta-hairpin, protein transport; 1.13A {Escherichia coli} SCOP: d.212.1.2 PDB: 2gsk_B* 1ihr_A 1qxx_A
Probab=27.02 E-value=65 Score=18.75 Aligned_cols=30 Identities=20% Similarity=0.246 Sum_probs=21.1
Q ss_pred HHHHCCCEEecCCceeEEEEecCCcEEEEEecc
Q psy9487 27 QAEAMGVEIYPGIPASEVLYHGDGSVKGIATGD 59 (101)
Q Consensus 27 ~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~ 59 (101)
.|++.|. +|+.+.++..+.+|+|..+++..
T Consensus 17 ~a~~~~~---~G~V~v~~~i~~~G~v~~~~v~~ 46 (90)
T 1u07_A 17 RAQALRI---EGQVKVKFDVTPDGRVDNVQILS 46 (90)
T ss_dssp HHHHHTC---CEEEEEEEEECTTSCEEEEEEEE
T ss_pred HHHHCCC---ceEEEEEEEECCCCCEEEEEEEe
Confidence 4555564 35667788887789998888753
No 293
>2k9k_A TONB2; metal transport; NMR {Listonella anguillarum}
Probab=26.16 E-value=71 Score=19.15 Aligned_cols=30 Identities=23% Similarity=0.232 Sum_probs=21.4
Q ss_pred HHHHCCCEEecCCceeEEEEecCCcEEEEEecc
Q psy9487 27 QAEAMGVEIYPGIPASEVLYHGDGSVKGIATGD 59 (101)
Q Consensus 27 ~A~~~Gv~i~~gt~v~~i~~~~~g~v~GV~~~~ 59 (101)
.|++.|+ +|+.+..+..+.+|+|..+++..
T Consensus 32 ~A~~~~~---eG~V~v~f~I~~~G~v~~~~v~~ 61 (106)
T 2k9k_A 32 RALKRGV---EGFVTLSFTIDTTGKAVDINVVD 61 (106)
T ss_dssp HHHHHCC---CCEEEEEEEEETTTEEEEEEEEE
T ss_pred HHHHcCC---eeEEEEEEEECCCCcEEEEEEEE
Confidence 4555564 36677788887789998888754
No 294
>3fyb_A Protein of unknown function (DUF1244); hydrocar degrading, structural genomics, PSI-2; HET: PEG; 1.80A {Alcanivorax borkumensis SK2}
Probab=24.80 E-value=33 Score=21.84 Aligned_cols=20 Identities=40% Similarity=0.584 Sum_probs=16.8
Q ss_pred hHHHHHHHHHHHHHCCCEEe
Q psy9487 17 LGHVVKWLGEQAEAMGVEIY 36 (101)
Q Consensus 17 r~~~d~~l~~~A~~~Gv~i~ 36 (101)
|.=|.+|+.+.|++.|+++-
T Consensus 44 RNCLskWy~~aA~~~G~~~~ 63 (104)
T 3fyb_A 44 RNCLAKWLMEAATEQGVELD 63 (104)
T ss_dssp HHHHHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHHHHHcCCcCC
Confidence 66788999999999998653
No 295
>3dtg_A Branched-chain amino acid aminotransferase; open twisted alpha/beta; HET: PLP; 1.90A {Mycobacterium smegmatis} PDB: 3dtf_A* 3jz6_A* 3ht5_A*
Probab=24.14 E-value=81 Score=23.68 Aligned_cols=19 Identities=26% Similarity=0.431 Sum_probs=15.8
Q ss_pred EEEeecCCchhhHHHhhhC
Q psy9487 83 TIFAEGCHGHLTKSLSSRF 101 (101)
Q Consensus 83 VI~A~G~~s~l~~~l~~~~ 101 (101)
+.+.+|..++++++|.+.|
T Consensus 335 ~~ig~G~~Gpvt~~L~~~~ 353 (372)
T 3dtg_A 335 FTIADGQPGEITMALRDTL 353 (372)
T ss_dssp EECTTSSCCHHHHHHHHHH
T ss_pred EEcCCCCcCHHHHHHHHHH
Confidence 4568999999999998765
No 296
>1vl4_A PMBA-related protein; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS regulation; 1.95A {Thermotoga maritima} SCOP: d.283.1.1
Probab=21.99 E-value=2.3e+02 Score=21.51 Aligned_cols=45 Identities=13% Similarity=0.104 Sum_probs=27.9
Q ss_pred EEEEhHHHHHHHHHHHHHCCCE---EecCCceeEEEEecCCcEEEEEec
Q psy9487 13 YVVRLGHVVKWLGEQAEAMGVE---IYPGIPASEVLYHGDGSVKGIATG 58 (101)
Q Consensus 13 ~~v~r~~~d~~l~~~A~~~Gv~---i~~gt~v~~i~~~~~g~v~GV~~~ 58 (101)
..+....+-+.+++.|+++|++ ++....-..+.++ ++++..+...
T Consensus 11 ~~~~~~~~~~~~l~~a~~~gadaev~~~~~~~~~v~~~-~g~v~~~~~~ 58 (447)
T 1vl4_A 11 HHMTFEEFKDRLFALAKKNGVEVQISFLETREFSLRLA-NGDLDQYTDA 58 (447)
T ss_dssp ---CHHHHHHHHHHHHHHHTCEEEEEEEEEEEEEEEEE-TTEEEEEEEE
T ss_pred cccCHHHHHHHHHHHHHHcCCcEEEEEEEeEeEEEEEE-CCEeEEEEee
Confidence 4455566677778899988966 3334455666774 6777766543
No 297
>3ir9_A Peptide chain release factor subunit 1; structural genomics, APC36528.1, C-terminal domain, PSI-2, protein structure initiative; 2.21A {Methanosarcina mazei}
Probab=21.57 E-value=86 Score=20.98 Aligned_cols=25 Identities=16% Similarity=0.170 Sum_probs=20.6
Q ss_pred cEEEEhHHHHHHHHHHHHHCCCEEe
Q psy9487 12 NYVVRLGHVVKWLGEQAEAMGVEIY 36 (101)
Q Consensus 12 ~~~v~r~~~d~~l~~~A~~~Gv~i~ 36 (101)
..++.|..+..||.+.+++.|+++.
T Consensus 113 ~~~~e~~~~ve~L~e~~~~~G~~v~ 137 (166)
T 3ir9_A 113 LEVTDVTDIVDEFSELADKSNAKVV 137 (166)
T ss_dssp EEEEEEEEHHHHHHHHHHHTTCEEE
T ss_pred chhhhHHHHHHHHHHHHHhcCCEEE
Confidence 3467788889999999999996654
No 298
>1y6u_A XIS, excisionase from transposon TN916; structure, DNA architectural protein, tyrosine recombinase, winged-helix protein; NMR {Enterococcus faecalis}
Probab=21.00 E-value=23 Score=20.60 Aligned_cols=18 Identities=11% Similarity=0.093 Sum_probs=14.5
Q ss_pred CCCCcEEEEhHHHHHHHH
Q psy9487 8 NNHGNYVVRLGHVVKWLG 25 (101)
Q Consensus 8 ~~~~~~~v~r~~~d~~l~ 25 (101)
..-+-|.+.|+.|++||-
T Consensus 48 ~iG~~~lI~r~~fe~~l~ 65 (70)
T 1y6u_A 48 MNGNRIQIKRKQFEKIID 65 (70)
T ss_dssp EETTEEEEESHHHHHTST
T ss_pred EeCCEEEEEHHHHHHHHH
Confidence 344589999999999973
Done!